Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 4A_40S Identification type Empty_40S Fraction Average Fraction Std. Dev. Fraction 1 Fraction 2 Fraction 3 Fraction 4 Fraction 5 Fraction 6 Fraction 7 Fraction 8 Fraction 9 Fraction 10 Experiment 4A_40S Experiment Empty_40S Intensity Intensity 4A_40S Intensity Empty_40S Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs MS/MS Count LFQ intensity 4A_40S LFQ intensity Empty_40S AAAAAAALQAK TILRQARNHKLRVDKAAAAAAALQAKSDEK RVDKAAAAAAALQAKSDEKAAVAGKKPVVG K A A A K S 8 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 0 955.54508 P36578 P36578 354 364 RPL4 60S ribosomal protein L4 yes yes 2 0.0013767 128.61 By matching By MS/MS 7 0.707 1 2 1 2 2 1181500 1073600 107920 0 808 0 0;1;2;3 0 0 1 25230 372360 AAAAAAGAASGLPGPVAQGLK ______________________________ GAASGLPGPVAQGLKEALVDTLTGILSPVQ M A A L K E 9 0 0 0 0 1 0 4 0 0 2 1 0 0 2 1 0 0 0 1 0 0 21 0 1747.9581 Q96P70 Q96P70 2 22 IPO9 Importin-9 yes yes 2 1.5817E-08 142.12 By MS/MS 3.5 0.5 1 1 2 1414700 1414700 0 1 2237 1 4;5 1 1 1 38469 0 AAAAAAGSGTPR ______________________________ ______________________________ M A A P R E 6 1 0 0 0 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 0 0 12 0 999.50976 Q9NR33 Q9NR33 2 13 POLE4 DNA polymerase epsilon subunit 4 yes yes 2 0.00080459 120.31 By MS/MS 9 0 1 1 1045900 1045900 0 2 2600 2 6 2 2 1 600250 0 AAAAAATAAAAASIR ______________________________ AAAAAATAAAAASIRERQTVALKRMLNFNV M A A I R E 11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 15 0 1256.6837 Q8WVM8 Q8WVM8 2 16 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 9.0412E-29 234.61 By MS/MS 5.5 0.5 1 1 2 4471600 4471600 0 3 2033 3 7;8 3;4 3 2 172540 0 AAAAAATAAAAASIRER ______________________________ AAAATAAAAASIRERQTVALKRMLNFNVPH M A A E R Q 11 2 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 17 1 1541.8274 Q8WVM8 Q8WVM8 2 18 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 6.0681E-18 200.93 By MS/MS 5 0 1 1 624270 624270 0 4 2033 4 9 5 5 1 25660 0 AAAAADLANR YLGFGTPSNLGKGRRAAAAADLANRSGESN GKGRRAAAAADLANRSGESNTHQDIEEKDR R A A N R S 6 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 0 942.48829 O76031 O76031 453 462 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.0033513 112.84 By MS/MS 5.5 1.12 1 1 1 1 4 11479000 11479000 0 5 344 5 10;11;12;13 6 6 1 248600 0 AAAAAGLGGGGAGPGPEAGDFLAR ______________________________ GGAGPGPEAGDFLARYRLVSNKLKKRFLRK M A A A R Y 8 1 0 1 0 0 1 8 0 0 2 0 0 1 2 0 0 0 0 0 0 0 24 0 2009.9919 P23610 P23610 2 25 F8A1 Factor VIII intron 22 protein yes yes 2;3 6.3078E-41 232.53 By MS/MS 7 0 2 2 3486500 3486500 0 6 673 6 14;15 7;8 7 2 62305 0 AAAAAGTATSQR ______________________________ ______________________________ M A A Q R F 6 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 0 0 0 12 0 1074.5418 Q9Y2Z0 Q9Y2Z0 2 13 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 6.4458E-05 153.97 By MS/MS 8.33 1.25 1 1 1 3 13940000 13940000 0 7 2907 7 16;17;18 9;10;11 9 3 696300 0 AAAAAMAEQESAR ______________________________ ______________________________ M A A A R N 7 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 13 0 1275.5877 Q7L5D6 Q7L5D6 2 14 GET4 Golgi to ER traffic protein 4 homolog yes yes 2 0.049391 42.802 By MS/MS 8 0 1 1 253410 253410 0 8 1767 8 19 12 12 0 16717 0 AAAAAQGGGGGEPR ______________________________ MAAAAAQGGGGGEPRRTEGVGPGVPGEVEM M A A P R R 5 1 0 0 0 1 1 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 14 0 1168.5585 P27361 P27361 2 15 MAPK3 Mitogen-activated protein kinase 3 yes yes 2 0.00065505 117.86 By MS/MS 7 0 1 1 689770 689770 0 9 704 9 20 13 13 1 12326 0 AAAAASAPQQLSDEELFSQLR ______________________________ APQQLSDEELFSQLRRYGLSPGPVTESTRP M A A L R R 6 1 0 1 0 3 2 0 0 0 3 0 0 1 1 3 0 0 0 0 0 0 21 0 2202.0917 Q9Y2U8 Q9Y2U8 2 22 LEMD3 Inner nuclear membrane protein Man1 yes yes 2;3 0.0023391 89.374 By MS/MS 4 0 2 2 319270 319270 0 10 2902 10 21;22 14;15 14 2 8715.8 0 AAAAASAPQQLSDEELFSQLRR ______________________________ PQQLSDEELFSQLRRYGLSPGPVTESTRPV M A A R R Y 6 2 0 1 0 3 2 0 0 0 3 0 0 1 1 3 0 0 0 0 0 0 22 1 2358.1928 Q9Y2U8 Q9Y2U8 2 23 LEMD3 Inner nuclear membrane protein Man1 yes yes 3 0.0061598 61.52 By MS/MS 4 0 1 1 363230 363230 0 11 2902 11 23 16 16 1 9915.8 0 AAAAASGAGGAAGAGTGGAGPAGR ______________________________ GAAGAGTGGAGPAGRLLPPPAPGSPAAPAA M A A G R L 11 1 0 0 0 0 0 9 0 0 0 0 0 0 1 1 1 0 0 0 0 0 24 0 1753.8456 Q9Y2K2 Q9Y2K2 2 25 SIK3 Serine/threonine-protein kinase SIK3 yes yes 2 9.2855E-40 223.14 By MS/MS 3 0 1 1 751080 751080 0 12 2890 12 24 17 17 1 19607 0 AAAAASHLNLDALR ______________________________ MAAAAASHLNLDALREVLECPICMESFTEE M A A L R E 6 1 1 1 0 0 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 14 0 1392.7474 Q13049 Q13049 2 15 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 2 0.00056667 118.87 By MS/MS 3.5 1.12 1 1 1 1 4 788600 788600 0 13 1329 13 25;26;27;28 18 18 1 30868 0 AAAACLDKAVEYGLIQPNQDGE ILSVLAKGDHSPVTRAAAACLDKAVEYGLI KAVEYGLIQPNQDGE_______________ R A A G E - 5 0 1 2 1 2 2 2 0 1 2 1 0 0 1 0 0 0 1 1 0 0 22 1 2332.1005 Q9H3U1 Q9H3U1 923 944 UNC45A Protein unc-45 homolog A yes yes 2;3 0.0047049 111.7 By MS/MS 4 0 2 2 2365400 2365400 0 14 2493 14 29;30 19;20 19 2 64573 0 AAAADSFSGGPAGVR ______________________________ AAAADSFSGGPAGVRLPRSPPLKVLAEQLR M A A V R L 5 1 0 1 0 0 0 3 0 0 0 0 0 1 1 2 0 0 0 1 0 0 15 0 1332.6422 Q96E14 Q96E14 2 16 RMI2 RecQ-mediated genome instability protein 2 yes yes 2 7.9211E-29 236.77 By MS/MS 9.5 0.5 1 1 2 447440 447440 0 15 2156 15 31;32 21 21 1 295540 0 AAAADSFSGGPAGVRLPR ______________________________ ADSFSGGPAGVRLPRSPPLKVLAEQLRRDA M A A P R S 5 2 0 1 0 0 0 3 0 0 1 0 0 1 2 2 0 0 0 1 0 0 18 1 1698.8802 Q96E14 Q96E14 2 19 RMI2 RecQ-mediated genome instability protein 2 yes yes 2 0.015017 96.745 By MS/MS 9.5 0.5 1 1 2 616460 616460 0 16 2156 16 33;34 22 22 1 378110 0 AAAAECDVVMAATEPELLDDQEAKR ______________________________ AATEPELLDDQEAKREAETFKEQGNAYYAK M A A K R E 7 1 0 3 1 1 4 0 0 0 2 1 1 0 1 0 1 0 0 2 0 0 25 1 2702.2527 Q99615 Q99615 2 26 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2;3 1.7578E-06 137.19 By MS/MS 6 0 2 2 5390700 5390700 0 17 2276 17 35;36 23;24 24 2 42037 0 AAAAEGVLATR ______________________________ ______________________________ M A A T R S 5 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1028.5615 Q6QNY1 Q6QNY1 2 12 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 2 2.9677E-05 164.97 By MS/MS 9 0 1 1 1454100 1454100 0 18 1721 18 37 25 25 1 834530 0 AAAAELSLLEK ______________________________ ______________________________ M A A E K S 4 0 0 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1114.6234 O43324 O43324 2 12 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 3.1725E-07 180.67 By MS/MS 9 0.707 1 2 1 4 34361000 34361000 0 19 194 19 38;39;40;41 26;27;28;29;30 26 5 20894000 0 AAAAGGPCVR ______________________________ ______________________________ M A A V R S 4 1 0 0 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 10 0 928.45488 Q5SRE5 Q5SRE5 2 11 NUP188 Nucleoporin NUP188 homolog yes yes 2 0.0021099 105.39 By MS/MS 1 0 1 1 111380 111380 0 20 1618 20 42 31 31 1 5441.8 0 AAAAKPNNLSLVVHGPGDLR ______________________________ PNNLSLVVHGPGDLRLENYPIPEPGPNEVL M A A L R L 4 1 2 1 0 0 0 2 1 0 3 1 0 0 2 1 0 0 0 2 0 0 20 1 1999.0963 Q00796 Q00796 2 21 SORD Sorbitol dehydrogenase yes yes 3 0.00042413 92.31 By MS/MS 7.5 0.5 1 1 2 1806600 1806600 0 21 1237 21 43;44 32 32 1 55769 0 AAAALRR ______________________________ ______________________________ M A A R R F 4 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 1 727.44531 Q9BSF4 Q9BSF4 2 8 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.023187 160.1 By MS/MS By matching 8.75 0.829 2 1 1 3 1 15175000 15137000 37354 22 2336 22 45;46;47;48 33;34 34 2 1674300 318670 AAAAPGASPSPGGDAAWSEAGPGPRPLAR DANKASARASREGGRAAAAPGASPSPGGDA AAWSEAGPGPRPLARSASPPKAKNLNGGLR R A A A R S 9 2 0 1 0 0 1 5 0 0 1 0 0 0 6 3 0 1 0 0 0 0 29 1 2641.2997 P52701 P52701 34 62 MSH6 DNA mismatch repair protein Msh6 yes yes 3 0.02902 39.373 By MS/MS 3 0 1 1 2877900 2877900 0 23 989 23 49 35 35 1 75129 0 AAAAVEPDVVVK LSARLRALRQRQLDRAAAAVEPDVVVKRQE LDRAAAAVEPDVVVKRQEALAAARLKMQEE R A A V K R 4 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 4 0 0 12 0 1167.6499 Q9BQE4 Q9BQE4 66 77 VIMP Selenoprotein S yes yes 2 0.012425 94.309 By MS/MS 9 0 1 1 676560 676560 0 24 2315 24 50 36 36 1 388280 0 AAAAVGAGHGAGGPGAASSSGGAR ______________________________ GAGGPGAASSSGGAREGARVAALCLLWYAL M A A A R E 9 1 0 0 0 0 0 8 1 0 0 0 0 0 1 3 0 0 0 1 0 0 24 0 1863.8936 Q96K37 Q96K37 2 25 SLC35E1 Solute carrier family 35 member E1 yes yes 2;3 1.4486E-30 196.95 By MS/MS 1.5 0.5 2 2 4 1045300 1045300 0 25 2215 25 51;52;53;54 37;38;39 37 3 51352 0 AAAAVQGGR ______________________________ ______________________________ M A A G R S 4 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 799.43005 Q15005 Q15005 2 10 SPCS2 Signal peptidase complex subunit 2 yes yes 2 9.4769E-07 186.67 By MS/MS By matching 7.25 3.63 1 2 1 3 1 3169500 3132700 36817 26 1458 26 55;56;57;58 40;41 41 2 1827500 396780 AAAAVVAAAAR TAGTVAAMAATPSARAAAAVVAAAARTGSE PSARAAAAVVAAAARTGSEARVSKAALATK R A A A R T 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 11 0 940.54541 Q8WWH5 Q8WWH5 39 49 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 2 8.7814E-05 163.67 By MS/MS 7.5 0.5 1 1 2 1286200 1286200 0 27 2038 27 59;60 42 42 1 51037 0 AAAAVVEFQR ______________________________ ______________________________ M A A Q R A 4 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 10 0 1060.5665 O00231 O00231 2 11 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 4.3498E-07 180.87 By MS/MS By MS/MS 7.57 1.4 2 2 1 1 1 5 2 27005000 26827000 178140 28 80 28 61;62;63;64;65;66;67 43;44;45;46;47 45 5 562500 704610 AAAAVVVPAEWIK ______________________________ ______________________________ M A A I K N 5 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 1 0 3 0 0 13 0 1323.7551 Q8NI27 Q8NI27 2 14 THOC2 THO complex subunit 2 yes yes 2 0.0016171 107.15 By MS/MS 4 1.41 1 1 1 1 1 5 613700 613700 0 29 1976 29 68;69;70;71;72 48 48 1 16596 0 AAADGDRDCVLQK EFGTEFTDHYIEVVKAAADGDRDCVLQKSR VKAAADGDRDCVLQKSRDLKFLTGFETKAF K A A Q K S 3 1 0 3 1 1 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 13 1 1417.662 Q96D53 Q96D53 407 419 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.014813 119.74 By MS/MS 6 0 1 1 1774500 1774500 0 30 2147 30 73 49 49 1 13837 0 AAADRDRETVR EYDRSFTDLYIQIIRAAADRDRETVRAKSI QIIRAAADRDRETVRAKSIEMKFLTGYEVK R A A V R A 3 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 11 2 1258.6378 Q8NI60 Q8NI60 528 538 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2;3 0.013221 125.71 By MS/MS 6.5 0.5 2 2 4 10248000 10248000 0 31 1978 31 74;75;76;77 50;51 51 2 83440 0 AAAEDVNVTFEDQQK ______________________________ AAAEDVNVTFEDQQKINKFARNTSRITELK K A A Q K I 3 0 1 2 0 2 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 15 0 1663.7689 Q9NQP4 Q9NQP4 8 22 PFDN4 Prefoldin subunit 4 yes yes 2 2.8332E-50 340.88 By MS/MS 10 0 1 1 2030100 2030100 0 32 2591 32 78 52 52 1 2157800 0 AAAEEEDGGPEGPNRER ______________________________ AEEEDGGPEGPNRERGGAGATFECNICLET M A A E R G 3 2 1 1 0 0 5 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 17 1 1782.7769 Q99942 Q99942 2 18 RNF5 E3 ubiquitin-protein ligase RNF5 yes yes 2 0.016162 102.66 By MS/MS 9 0 1 1 875240 875240 0 33 2298 33 79 53 53 1 502310 0 AAAEGLMSLLR ISTITPQIQAFNLQKAAAEGLMSLLREMGK NLQKAAAEGLMSLLREMGKGYLALCSYNCK K A A L R E 3 1 0 0 0 0 1 1 0 0 3 0 1 0 0 1 0 0 0 0 0 0 11 0 1130.6118 P30260 P30260 457 467 CDC27 Cell division cycle protein 27 homolog yes yes 2 0.0015738 147.75 By MS/MS 4.5 0.5 1 1 2 102550 102550 0 34 739 34 80;81 54 54 1 3380.6 0 AAAEVNQDYGLDPK RMPTPVIKAFGILKRAAAEVNQDYGLDPKI RAAAEVNQDYGLDPKIANAIMKAADEVAEG R A A P K I 3 0 1 2 0 1 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 14 0 1489.7049 P07954 P07954 102 115 FH Fumarate hydratase, mitochondrial yes yes 2 2.539E-18 227.48 By MS/MS 7 0 1 1 3780000 3780000 0 35 496 35 82 55;56 56 2 67550 0 AAAFEEQENETVVVK AVKRASDNLVKAAQKAAAFEEQENETVVVK AAAFEEQENETVVVKEKMVGGIAQIIAAQE K A A V K E 3 0 1 0 0 1 4 0 0 0 0 1 0 1 0 0 1 0 0 3 0 0 15 0 1662.8101 Q9Y490 Q9Y490 2477 2491 TLN1 Talin-1 yes yes 2 2.1125E-38 262.15 By MS/MS 2 0 1 1 408840 408840 0 36 2947 36 83 57 57 1 20322 0 AAAGAAATHLEVAR ______________________________ MAAAGAAATHLEVARGKRAALFFAAVAIVL M A A A R G 7 1 0 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 14 0 1307.6946 Q96S52 Q96S52 2 15 PIGS GPI transamidase component PIG-S yes yes 2 3.241E-06 169.58 By MS/MS 5 0 1 1 1652200 1652200 0 37 2252 37 84 58 58 1 67911 0 AAAGGAEGRR ______________________________ ______________________________ M A A R R A 4 2 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 914.46823 Q86UK7 Q86UK7 2 11 ZNF598 Zinc finger protein 598 yes yes 2 0.0028443 149.4 By MS/MS By matching 4 0 2 1 1 1570600 1557700 12848 38 1821 38 85;86 59 59 1 42525 26847 AAAGGGGGGAAAAGR ______________________________ AAAGGGGGGAAAAGRAYSFKVVLLGEGCVG M A A G R A 7 1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 1070.5217 Q9UL25 Q9UL25 2 16 RAB21 Ras-related protein Rab-21 yes yes 2 3.8802E-29 244.55 By MS/MS 8.5 0.5 1 1 2 3316900 3316900 0 39 2819 39 87;88 60;61 61 2 1589300 0 AAAGLGGGDSGDGTAR RATGNLSASCGSALRAAAGLGGGDSGDGTA AAGLGGGDSGDGTARAASKCQMMEERANLM R A A A R A 4 1 0 2 0 0 0 6 0 0 1 0 0 0 0 1 1 0 0 0 0 0 16 0 1331.6066 Q96T51 Q96T51 87 102 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 0.00397 108.68 By MS/MS 5 0 1 1 403400 403400 0 40 2259 40 89 62 62 1 16581 0 AAAGPAAGPTGPEPMPSYAQLVQR ______________________________ TGPEPMPSYAQLVQRGWGSALAAARGCTDC M A A Q R G 6 1 0 0 0 2 1 3 0 0 1 0 1 0 5 1 1 0 1 1 0 0 24 0 2336.1583 P27544 P27544 2 25 CERS1 Ceramide synthase 1 yes yes 3 0.00012656 81.016 By MS/MS 2 0.816 1 1 1 3 1490600 1490600 0 41 706 41 90;91;92 63 63 476 1 66322 0 AAAIGITQVVISR CVKDRNENEIGHSRRAAAIGITQVVISRIT RRAAAIGITQVVISRITMSAPGMILLPVIM R A A S R I 3 1 0 0 0 1 0 1 0 3 0 0 0 0 0 1 1 0 0 2 0 0 13 0 1297.7718 Q96NB2 Q96NB2 220 232 SFXN2 Sideroflexin-2 yes yes 2 0.00018399 150.09 By MS/MS By matching 8 0 2 1 1 1232200 1213100 19164 42 2231 42 93;94 64 64 1 80025 163500 AAALAAAVAQDPAASGAPSS KRLKEEKQKRKKEARAAALAAAVAQDPAAS AAVAQDPAASGAPSS_______________ R A A S S - 10 0 0 1 0 1 0 1 0 0 1 0 0 0 2 3 0 0 0 1 0 0 20 0 1695.8428 Q8TAE8 Q8TAE8 203 222 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2;3 9.7306E-06 172.85 By MS/MS By matching 9.25 0.433 3 1 3 1 9708300 9592700 115550 43 1980 43 95;96;97;98 65;66 65 2 5534400 1245300 AAALACK TFVAKGRRKAEAENKAAALACKKLKSLGLV RKAEAENKAAALACKKLKSLGLVDRNNEPL K A A C K K 4 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 0 703.3687 Q7L2E3 Q7L2E3 304 310 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.044485 104.94 By MS/MS 2 0.816 1 1 1 3 777210 777210 0 44 1763 44 99;100;101 67 67 1 23182 0 AAALASLK ASFNFLGLLDNPRVKAAALASLKKYGVGTC LDNPRVKAAALASLKKYGVGTCGPRGFYGT K A A L K K 4 0 0 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 743.45414 O15269 O15269 119 126 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.045282 93.195 By MS/MS 6 0 1 1 2857500 2857500 0 45 165 45 102 68 68 1 22283 0 AAALASLKK ASFNFLGLLDNPRVKAAALASLKKYGVGTC DNPRVKAAALASLKKYGVGTCGPRGFYGTF K A A K K Y 4 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 9 1 871.5491 O15269 O15269 119 127 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.0098011 124.08 By MS/MS 6.5 0.5 1 1 2 4527400 4527400 0 46 165 46 103;104 69 69 1 38202 0 AAALCNACELSGK KTPLPPGEDVIASERAAALCNACELSGKSL ERAAALCNACELSGKSLFVLPHTDHLVGYI R A A G K S 4 0 1 0 2 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 13 0 1363.6224 Q7Z392 Q7Z392 158 170 TRAPPC11 Trafficking protein particle complex subunit 11 yes yes 2 0.0021845 118.77 By MS/MS 1 0 1 1 186810 186810 0 47 1781 47 105 70 70 1 9127.3 0 AAALEQFK AAKSMGAIVRGFDTRAAALEQFKSLGAEPL VRGFDTRAAALEQFKSLGAEPLEVDLKESG R A A F K S 3 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 876.47052 Q13423 Q13423 260 267 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.022336 103.74 By MS/MS 1.5 0.5 1 1 2 1095400 1095400 0 48 1367 48 106;107 71 71 1 53800 0 AAAMDVDTPSGTNSGAGK ______________________________ MDVDTPSGTNSGAGKKRFEVKKWNAVALWA M A A G K K 4 0 1 2 0 0 0 3 0 0 0 1 1 0 1 2 2 0 0 1 0 0 18 0 1648.7363 P62877 P62877 2 19 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 1.0617E-19 211.22 By MS/MS 10 0 2 2 1166500 1166500 0 49 1155 49;50 108;109 72;73 73 903 2 1239900 0 AAAMDVDTPSGTNSGAGKK ______________________________ DVDTPSGTNSGAGKKRFEVKKWNAVALWAW M A A K K R 4 0 1 2 0 0 0 3 0 0 0 2 1 0 1 2 2 0 0 1 0 0 19 1 1776.8312 P62877 P62877 2 20 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 8.6961E-07 140.91 By MS/MS 10 0 2 2 786760 786760 0 50 1155 51;52 110;111 74;75 75 903 2 836240 0 AAAPAPEEEMDECEQALAAEPK EEKQKPQAERKEEKKAAAPAPEEEMDECEQ EEMDECEQALAAEPKAKDPFAHLPKSTFVL K A A P K A 7 0 0 1 1 1 6 0 0 0 1 1 1 0 3 0 0 0 0 0 0 0 22 0 2356.0199 P26641 P26641 254 275 EEF1G Elongation factor 1-gamma yes yes 2 2.1689E-09 157.91 By MS/MS 7 0.816 1 1 1 3 6125500 6125500 0 51 700 53 112;113;114 76;77 77 2 72076 0 AAAQEADGAR ______________________________ ______________________________ M A A A R S 5 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 958.44682 O96005 O96005 2 11 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 2 5.8341E-05 159.34 By MS/MS 1.5 0.5 1 1 2 1338200 1338200 0 52 418 54 115;116 78;79 79 2 65738 0 AAAQEQYSAAVAR MVIDGVTYPGNIKEKAAAQEQYSAAVARGE EKAAAQEQYSAAVARGESAGLVRATGRKTE K A A A R G 6 1 0 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 13 0 1334.6579 CON__Q3T052 CON__Q3T052 100 112 yes yes 2 1.7553E-05 170.4 By MS/MS 9 0 1 1 191500 191500 0 + 53 59 55 117 80 80 1 109900 0 AAAQLLQSQAQQSGAQQTK KKELEEEVNNFQKKKAAAQLLQSQAQQSGA LLQSQAQQSGAQQTKKDKDKKNASFT____ K A A T K K 5 0 0 0 0 7 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 19 0 1956.0025 Q9NVA2 Q9NVA2 400 418 SEPT11 Septin-11 yes yes 2;3 3.852E-26 272.09 By MS/MS 6.33 0.471 2 1 3 3616400 3616400 0 54 2647 56 118;119;120 81;82 82 2 30112 0 AAAQYYLGNFR KCADPDLNAVLYTNRAAAQYYLGNFRSALN YTNRAAAQYYLGNFRSALNDVTAARKLKPC R A A F R S 3 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 11 0 1272.6251 O95801 O95801 124 134 TTC4 Tetratricopeptide repeat protein 4 yes yes 2 3.13E-05 172.21 By MS/MS 6.5 0.5 1 1 2 2201500 2201500 0 55 407 57 121;122 83;84;85 83 3 28251 0 AAASGNENIQPPPLAYKK SLFQSLRACRNQVAKAAASGNENIQPPPLA SGNENIQPPPLAYKKWGLQDIDTIIDHASV K A A K K W 4 0 2 0 0 1 1 1 0 1 1 2 0 0 3 1 0 0 1 0 0 0 18 1 1867.9792 Q9H2M9 Q9H2M9 238 255 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 3 0.041834 59.634 By MS/MS 3 0 1 1 1060700 1060700 0 56 2481 58 123 86 86 1 27688 0 AAASGSVLQR ______________________________ ______________________________ M A A Q R C 3 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 10 0 958.51959 Q5VWZ2 Q5VWZ2 2 11 LYPLAL1 Lysophospholipase-like protein 1 yes yes 2 0.00011487 175.51 By MS/MS 9 0.816 1 1 1 3 5383500 5383500 0 57 1656 59 124;125;126 87;88;89 88 3 1693800 0 AAASTDYYK ICENNRYGMGTSVERAAASTDYYKRGDFIP GTSVERAAASTDYYKRGDFIPGLRVDGMDI R A A Y K R 3 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 2 0 0 0 9 0 988.45018 P08559 P08559 236 244 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.010344 104.06 By MS/MS By matching 7.5 0.5 1 1 1 1 653780 577250 76522 58 504 60 127;128 90 90 1 38081 314140 AAASTDYYKR ICENNRYGMGTSVERAAASTDYYKRGDFIP TSVERAAASTDYYKRGDFIPGLRVDGMDIL R A A K R G 3 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 2 0 0 0 10 1 1144.5513 P08559 P08559 236 245 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 3 0.019887 83.783 By MS/MS By matching 7.33 0.471 2 1 2 1 5532800 5485400 47455 59 504 61 129;130;131 91 91 1 114430 194810 AAASVTPPGSLELLQPGFSK ______________________________ TPPGSLELLQPGFSKTLLGTKLEAKYLCSA M A A S K T 3 0 0 0 0 1 1 2 0 0 3 1 0 1 3 3 1 0 0 1 0 0 20 0 1969.052 Q12933 Q12933 2 21 TRAF2 TNF receptor-associated factor 2 yes yes 2 0.040357 49.298 By MS/MS 6.5 0.5 1 1 2 2181700 2181700 0 60 1317 62 132;133 92 92 1 18209 0 AAASYALGR AVLLEALGSPSEDVRAAASYALGRVGAGSL PSEDVRAAASYALGRVGAGSLPDFLPFLLE R A A G R V 4 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 9 0 878.46102 O75155 O75155 879 887 CAND2 Cullin-associated NEDD8-dissociated protein 2 yes yes 2 9.9277E-05 170.66 By MS/MS 3.5 0.5 1 1 2 587070 587070 0 61 286 63 134;135 93 93 1 15447 0 AAATAEEPDPK KLAGDMKSKVVVTEKAAATAEEPDPKGIPE VTEKAAATAEEPDPKGIPEFWFTIFRNVDM K A A P K G 4 0 0 1 0 0 2 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 11 0 1098.5193 Q99733 Q99733 147 157 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 2 0.001749 123.63 By MS/MS 6 0 1 1 1062900 1062900 0 62 2288 64 136 94 94 1 8288.5 0 AAATGLPEGPAVPVPSR LSDKSENGEAYQRKKAAATGLPEGPAVPVP ATGLPEGPAVPVPSRGNLAQPGGSSWRRIA K A A S R G 4 1 0 0 0 0 1 2 0 0 1 0 0 0 4 1 1 0 0 2 0 0 17 0 1588.8573 Q8N1S5 Q8N1S5 164 180 SLC39A11 Zinc transporter ZIP11 yes yes 2 1.4694E-06 141.73 By MS/MS 2 0.816 1 1 1 3 888150 888150 0 63 1902 65 137;138;139 95 95 1 37927 0 AAAVAAAGAGEPQSPDELLPK ______________________________ AGAGEPQSPDELLPKGDAEKPEEELEEDDD M A A P K G 7 0 0 1 0 1 2 2 0 0 2 1 0 0 3 1 0 0 0 1 0 0 21 0 1962.0058 Q9NS69 Q9NS69 2 22 TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes yes 2;3 1.0247E-05 156.6 By MS/MS By MS/MS 9.29 0.452 5 2 6 1 16834000 16687000 146560 64 2620 66 140;141;142;143;144;145;146 96;97;98;99;100;101;102;103;104 98 8 10461000 1579400 AAAVLPVLDLAQR KRIEAIVKNYPEGHKAAAVLPVLDLAQRQN HKAAAVLPVLDLAQRQNGWLPISAMNKVAE K A A Q R Q 4 1 0 1 0 1 0 0 0 0 3 0 0 0 1 0 0 0 0 2 0 0 13 0 1335.7874 P19404 P19404 76 88 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 2 0.0054646 101.38 By MS/MS 8.5 0.5 1 1 2 625530 625530 0 65 633 67 147;148 105 105 1 309980 0 AAAVQADDVEVLK GPADAMELADHLVKRAAAVQADDVEVLKVG KRAAAVQADDVEVLKVGRTQLIDAVLNLCT R A A L K V 4 0 0 2 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 13 0 1327.6983 Q8N201 Q8N201 683 695 INTS1 Integrator complex subunit 1 yes yes 2 0.00054669 136.96 By MS/MS 2.5 0.5 1 1 2 449610 449610 0 66 1903 68 149;150 106 106 1 19337 0 AAAVSLENVLLDVK PDLANFWHELHFVEKAAAVSLENVLLDVKE KAAAVSLENVLLDVKELGRGMELIRRECSI K A A V K E 3 0 1 1 0 0 1 0 0 0 3 1 0 0 0 1 0 0 0 3 0 0 14 0 1440.8188 Q8IVF7;Q96PY5 Q8IVF7 836 849 FMNL3;FMNL2 Formin-like protein 3;Formin-like protein 2 yes no 2 0.00016144 140.24 By MS/MS 3.5 0.5 1 1 2 140060 140060 0 67 1857 69 151;152 107 107 1 3755.1 0 AAAVSSVVR ______________________________ ______________________________ M A A V R R 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 9 0 858.49232 A6NDU8 A6NDU8 2 10 C5orf51 UPF0600 protein C5orf51 yes yes 2 0.00080268 147.29 By MS/MS 8 0 1 1 1186300 1186300 0 68 21 70 153 108 108 1 78258 0 AAAWGSSLTAATQR ______________________________ MAAAWGSSLTAATQRAVTPWPRGRLLTASL M A A Q R A 5 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 2 1 0 0 0 0 14 0 1389.7001 Q86U28 Q86U28 2 15 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial yes yes 2 3.2602E-08 178.46 By MS/MS 10 0 1 1 123100 123100 0 69 1818 71 154 109 109 1 130850 0 AAAYSAQVQPVDGATR AQMEAEWREALRALRAAAYSAQVQPVDGAT AAYSAQVQPVDGATRKKSQRVCRPRSIWRA R A A T R K 5 1 0 1 0 2 0 1 0 0 0 0 0 0 1 1 1 0 1 2 0 0 16 0 1603.7954 Q9H7E9 Q9H7E9 183 198 C8orf33 UPF0488 protein C8orf33 yes yes 2 1.0484E-48 263.89 By MS/MS 8.5 0.5 1 1 2 1013500 1013500 0 70 2516 72 155;156 110;111 110 2 581650 0 AACHLKLEDYDKAETEASK LDATPQDQAVLHRNRAACHLKLEDYDKAET LKLEDYDKAETEASKAIEKDGGDVKALYRR R A A S K A 4 0 0 2 1 0 3 0 1 0 2 3 0 0 0 1 1 0 1 0 0 0 19 2 2178.0263 Q9H3U1 Q9H3U1 65 83 UNC45A Protein unc-45 homolog A yes yes 4 0.023655 58.864 By MS/MS 4 0 1 1 1725300 1725300 0 71 2493 73 157 112 112 1 47099 0 AACQEAQVFGNQLIPPNAQVK GHWLYGKHCDNLLRRAACQEAQVFGNQLIP QVFGNQLIPPNAQVKKATVFLNPAACKGKA R A A V K K 4 0 2 0 1 4 1 1 0 1 1 1 0 1 2 0 0 0 0 2 0 0 21 0 2282.1478 Q53H12 Q53H12 41 61 AGK Acylglycerol kinase, mitochondrial yes yes 2;3 0.010774 81.904 By MS/MS 6.67 0.471 1 2 3 4750700 4750700 0 72 1587 74 158;159;160 113;114 114 2 80711 0 AADEEAFEDNSEEYIR TSICEKVIVPNMEFRAADEEAFEDNSEEYI ADEEAFEDNSEEYIRRDLEGSDIDTRRRAA R A A I R R 3 1 1 2 0 0 5 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 16 0 1886.7806 P55060 P55060 356 371 CSE1L Exportin-2 yes yes 2 4.3055E-64 306.44 By MS/MS 4.5 0.5 1 1 2 4108900 4108900 0 73 1025 75 161;162 115 115 1 116140 0 AADEEAFEDNSEEYIRR TSICEKVIVPNMEFRAADEEAFEDNSEEYI DEEAFEDNSEEYIRRDLEGSDIDTRRRAAC R A A R R D 3 2 1 2 0 0 5 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 17 1 2042.8817 P55060 P55060 356 372 CSE1L Exportin-2 yes yes 2;3 0.026081 89.466 By MS/MS 3.43 1.4 1 1 1 2 2 7 27094000 27094000 0 74 1025 76 163;164;165;166;167;168;169 116;117 116 2 777250 0 AADFIDQALAQK ANDTQEFNLSAYFERAADFIDQALAQKNGR FERAADFIDQALAQKNGRVLVHCREGYSRS R A A Q K N 4 0 0 2 0 2 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 12 0 1289.6616 P51452 P51452 105 116 DUSP3 Dual specificity protein phosphatase 3 yes yes 2 0.0075362 99.752 By MS/MS 9.5 0.5 1 1 2 784980 784980 0 75 964 77 170;171 118 118 1 624000 0 AADIDQEVKER PYIKDLFTCTIKRLKAADIDQEVKERAISC KRLKAADIDQEVKERAISCMGQIICNLGDN K A A E R A 2 1 0 2 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 11 1 1272.631 Q86VP6 Q86VP6 578 588 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.047808 94.363 By MS/MS 4 0.816 1 1 1 3 1307000 1307000 0 76 1829 78 172;173;174 119 119 1 36296 0 AADLNGDLTATR HTFKKMLPRDERRFKAADLNGDLTATREEF RFKAADLNGDLTATREEFTAFLHPEEFEHM K A A T R E 3 1 1 2 0 0 0 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 12 0 1216.6048 Q15293 Q15293 177 188 RCN1 Reticulocalbin-1 yes yes 2 7.0636E-11 199.82 By MS/MS 7 0 1 1 1088200 1088200 0 77 1489 79 175 120 120 1 19446 0 AADSICDGDLVDSQIR AAGGDMKKHLMLLSRAADSICDGDLVDSQI ADSICDGDLVDSQIRSKQNWSLLPAQAIYA R A A I R S 2 1 0 4 1 1 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 16 0 1733.789 P35251 P35251 911 926 RFC1 Replication factor C subunit 1 yes yes 2 6.3699E-50 271.01 By MS/MS 3 0 1 1 1430400 1430400 0 78 787 80 176 121 121 1 37341 0 AADTQVSETLK ______________________________ ______________________________ M A A L K R 2 0 0 1 0 1 1 0 0 0 1 1 0 0 0 1 2 0 0 1 0 0 11 0 1161.5877 Q92616 Q92616 2 12 GCN1L1 Translational activator GCN1 yes yes 2 0.0062903 99.973 By MS/MS 2 0 1 1 154580 154580 0 79 2068 81 177 122;123 122 2 7683.7 0 AADTQVSETLKR ______________________________ ______________________________ M A A K R F 2 1 0 1 0 1 1 0 0 0 1 1 0 0 0 1 2 0 0 1 0 0 12 1 1317.6888 Q92616 Q92616 2 13 GCN1L1 Translational activator GCN1 yes yes 2 5.6195E-05 172.56 By MS/MS 2.5 1.12 1 1 1 1 4 24920000 24920000 0 80 2068 82 178;179;180;181 124;125;126;127;128 127 5 1050500 0 AAEAADLGLGAAVPVELR ______________________________ AADLGLGAAVPVELRRERRMVCVEYPGVVR M A A L R R 6 1 0 1 0 0 2 2 0 0 3 0 0 0 1 0 0 0 0 2 0 0 18 0 1721.9312 Q9Y5Q8 Q9Y5Q8 2 19 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.002578 91.307 By MS/MS 6 0 1 1 1119600 1119600 0 81 2977 83 182 129 129 1 8730.5 0 AAEAADLGLGAAVPVELRR ______________________________ ADLGLGAAVPVELRRERRMVCVEYPGVVRD M A A R R E 6 2 0 1 0 0 2 2 0 0 3 0 0 0 1 0 0 0 0 2 0 0 19 1 1878.0323 Q9Y5Q8 Q9Y5Q8 2 20 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 3.8157E-07 150.49 By MS/MS 6 0 1 1 8108100 8108100 0 82 2977 84 183 130 130 1 63227 0 AAEAAGGKYR ______________________________ ______________________________ M A A Y R S 4 1 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 10 1 992.50394 Q96A65 Q96A65 2 11 EXOC4 Exocyst complex component 4 yes yes 2 0.012307 109.48 By MS/MS By matching 4 0 2 1 1 1915200 1858000 57211 83 2118 85 184;185 131 131 1 50720 119550 AAEAAINILK TCTGEGTSKKLAKHRAAEAAINILKANASI LAKHRAAEAAINILKANASICFAVPDPLMP R A A L K A 4 0 1 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1012.5917 O75569 O75569 91 100 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes yes 2 0.0019839 117.31 By MS/MS 7.5 0.5 1 1 2 5771100 5771100 0 84 317 86 186;187 132 132 1 148770 0 AAEADGPLKR ______________________________ ______________________________ M A A K R L 3 1 0 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 10 1 1026.5458 O75352 O75352 2 11 MPDU1 Mannose-P-dolichol utilization defect 1 protein yes yes 2 0.0029329 120.87 By MS/MS 3.75 3.11 1 1 1 1 4 7654800 7654800 0 85 299 87 188;189;190;191 133;134;135 134 2 2108700 0 AAEAEVELSAR STLASRLERQGAELKAAEAEVELSARRLRA AELKAAEAEVELSARRLRAWGARVQAQGHT K A A A R R 4 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1144.5724 Q8IZ83 Q8IZ83 619 629 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2 0.003805 112.75 By MS/MS 5 0 1 1 1056900 1056900 0 86 1886 88 192 136 136 1 43444 0 AAEALAAEAVASR ______________________________ ______________________________ M A A S R L 7 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1228.6412 A2RTX5 A2RTX5 2 14 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 2 0.00021907 136.49 By MS/MS 4 0 1 1 293640 293640 0 87 11 89 193 137 137 1 8016 0 AAECNIVVTQPR QVPQFILDDFIQNDRAAECNIVVTQPRRIS NDRAAECNIVVTQPRRISAVSVAERVAFER R A A P R R 2 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 1 0 0 2 0 0 12 0 1356.682 Q08211 Q08211 435 446 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00032497 171.92 By MS/MS 2.5 1.12 1 1 1 1 4 8460800 8460800 0 88 1287 90 194;195;196;197 138;139;140;141 140 4 247760 0 AAEDELQLPR ______________________________ ______________________________ M A A P R L 2 1 0 1 0 1 2 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1140.5775 P78318 P78318 2 11 IGBP1 Immunoglobulin-binding protein 1 yes yes 2 0.0088185 95.775 By MS/MS 7 0 1 1 816110 816110 0 89 1191 91 198 142 142 1 14584 0 AAEDLFVNIR SCLSLFRDEVFHIHKAAEDLFVNIRGYNKR FHIHKAAEDLFVNIRGYNKRINDIRECKEA K A A I R G 2 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1146.6033 Q9Y2A7 Q9Y2A7 306 315 NCKAP1 Nck-associated protein 1 yes yes 2 0.00013401 161.79 By MS/MS 4 0 1 1 1044800 1044800 0 90 2882 92 199 143 143 1 28521 0 AAEEAASTLASSIHPEQCIK KTLEAHKDSHKEVVRAAEEAASTLASSIHP ASTLASSIHPEQCIKVLCPIIQTADYPINL R A A I K V 5 0 0 0 1 1 3 0 1 2 1 1 0 0 1 3 1 0 0 0 0 0 20 0 2112.0157 Q7Z460 Q7Z460 1406 1425 CLASP1 CLIP-associating protein 1 yes yes 3 2.6606E-05 122.16 By MS/MS 3 0 1 1 1561400 1561400 0 91 1790 93 200 144 144 1 40759 0 AAEEIGIK GNRDDSNLYINVKLKAAEEIGIKATHIKLP YINVKLKAAEEIGIKATHIKLPRTTTESEV K A A I K A 2 0 0 0 0 0 2 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 8 0 829.45453 P11586 P11586 59 66 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0033279 147.52 By MS/MS 4 0 1 1 3529600 3529600 0 92 556 94 201 145 145 1 96354 0 AAEKEAALVQQEEEKAEQR KTETRLARVNEQRMKAAEKEAALVQQEEEK EAALVQQEEEKAEQRKRARAEKKALKKKKK K A A Q R K 5 1 0 0 0 3 6 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 19 2 2156.0709 Q15020 Q15020 583 601 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 3 0.026616 61.942 By MS/MS 3 0 1 1 801460 801460 0 93 1463 95 202 146 146 1 20922 0 AAELETDIR QAVRHLPQSVRIYIRAAELETDIRAKKRVL VRIYIRAAELETDIRAKKRVLRKALEHVPN R A A I R A 2 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1016.5138 O94906 O94906 379 387 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0065163 112.41 By MS/MS 3.5 0.5 1 1 2 1777600 1777600 0 94 358 96 203;204 147 147 1 48158 0 AAELIANSLATAGDGLIELR QQKKAAIISAEGDSKAAELIANSLATAGDG ANSLATAGDGLIELRKLEAAEDIAYQLSRS K A A L R K 5 1 1 1 0 0 2 2 0 2 4 0 0 0 0 1 1 0 0 0 0 0 20 0 1997.0793 P35232 P35232 220 239 PHB Prohibitin yes yes 2 0.0057676 79.471 By MS/MS 8 0 1 1 141510 141510 0 95 782 97 205 148;149 148 2 9335.2 0 AAELLAR EKYGTDIIMGLSSTRAAELLARDGPNSLTP IMGLSSTRAAELLARDGPNSLTPPKQTPEI R A A A R D 3 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 742.43374 P54707 P54707 83 89 ATP12A Potassium-transporting ATPase alpha chain 2 yes no 2 0.023329 119.57 By MS/MS 2.5 1.12 1 1 1 1 4 14463000 14463000 0 96 1016 98 206;207;208;209 150;151;152 150 3 520960 0 AAELTATQVEEEEEEEDFRK KLILAQKLSELAVEKAAELTATQVEEEEEE ATQVEEEEEEEDFRKKLNAGYSNTATEWSQ K A A R K K 3 1 0 1 0 1 8 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 20 1 2352.0605 O75717 O75717 820 839 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 3 0.009899 67.299 By MS/MS 3.5 0.5 1 1 2 2197900 2197900 0 97 325 99 210;211 153 153 1 57879 0 AAEMELQAK DFSGFQLLVDVALKRAAEMELQAKLTA___ DVALKRAAEMELQAKLTA____________ R A A A K L 3 0 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 9 0 989.48518 Q15583 Q15583 390 398 TGIF1 Homeobox protein TGIF1 yes yes 3 0.039468 83.206 By MS/MS 5 1.41 1 1 1 1 1 5 495120 495120 0 98 1509 100 212;213;214;215;216 154 154 1163 0 13477 0 AAEMLSQLDLFSR IVQEKVFKGLDLLEKAAEMLSQLDLFSRNE EKAAEMLSQLDLFSRNEDLEEIASTDLKYL K A A S R N 2 1 0 1 0 1 1 0 0 0 3 0 1 1 0 2 0 0 0 0 0 0 13 0 1479.7392 P78318 P78318 52 64 IGBP1 Immunoglobulin-binding protein 1 yes yes 2 1.9779E-07 155.33 By MS/MS 7 0 1 1 0 0 0 99 1191 101 217 155 155 930 1 0 0 AAEQYTPK QELSFAARSFYYKLRAAEQYTPKAKYHGNV SFYYKLRAAEQYTPKAKYHGNVMLLRAKTG R A A P K A 2 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 8 0 906.4447 P49327 P49327 2429 2436 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0013486 167.23 By MS/MS 5.25 3.15 1 1 1 1 1 1 1 1 8 18413000 18413000 0 100 915 102 218;219;220;221;222;223;224;225 156;157;158;159;160;161;162;163;164 158 9 1028300 0 AAESPDQKDTDGGPKEEESPV ETSIDVAGKPNEVTKAAESPDQKDTDGGPK QKDTDGGPKEEESPV_______________ K A A P V - 2 0 0 3 0 1 4 2 0 0 0 2 0 0 3 2 1 0 0 1 0 0 21 2 2184.9659 P53985 P53985 480 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2;3 0.0026774 108.66 By MS/MS By matching 2.56 1.34 3 1 3 1 1 7 2 7671300 7590900 80374 101 1008 103 226;227;228;229;230;231;232;233;234 165;166;167 167 3 343730 105010 AAESVSKPDVSEEAPGPSK RRLRAKLEKKTKKPKAAESVSKPDVSEEAP VSKPDVSEEAPGPSKVKTGKPEEASLDSRE K A A S K V 3 0 0 1 0 0 3 1 0 0 0 2 0 0 3 4 0 0 0 2 0 0 19 1 1883.9113 Q9BY42 Q9BY42 204 222 RTFDC1 Protein RTF2 homolog yes yes 3 0.02359 60.09 By MS/MS 8 0 1 1 436900 436900 0 102 2407 104 235 168 168 1 28822 0 AAETLNFGPEWLR ______________________________ ______________________________ M A A L R A 2 1 1 0 0 0 2 1 0 0 2 0 0 1 1 0 1 1 0 0 0 0 13 0 1502.7518 O75420 O75420 2 14 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 2 0.005225 90.05 By MS/MS 3 0 1 1 58335 58335 0 103 307 105 236 169;170;171 171 3 1522.8 0 AAETQTLNFGPEWLR ______________________________ AAETQTLNFGPEWLRALSSGGSITSPPLSP M A A L R A 2 1 1 0 0 1 2 1 0 0 2 0 0 1 1 0 2 1 0 0 0 0 15 0 1731.858 Q6Y7W6 Q6Y7W6 2 16 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 0.0037122 120.53 By MS/MS 3 0 1 1 247320 247320 0 104 1736 106 237 172 172 1 6456.2 0 AAETVLK HSWFQTLSTQEPCQRAAETVLKQQGVLALR STQEPCQRAAETVLKQQGVLALRPYLQKQP R A A L K Q 2 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 7 0 730.4225 P56192 P56192 185 191 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.023342 119.56 By MS/MS 2.5 1.12 1 1 1 1 4 2950600 2950600 0 105 1042 107 238;239;240;241 173 173 1 82798 0 AAFALGGLGSGFASNR AQAAAERLGYPVLVRAAFALGGLGSGFASN AFALGGLGSGFASNREELSALVAPAFAHTS R A A N R E 4 1 1 0 0 0 0 4 0 0 2 0 0 2 0 2 0 0 0 0 0 0 16 0 1494.7579 P27708 P27708 556 571 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 2.5089E-05 138.63 By MS/MS 1.5 0.5 1 1 2 219570 219570 0 106 709 108 242;243 174;175 175 2 10823 0 AAFGEEVDAVDTGISR LEKEGSLLSKQEESKAAFGEEVDAVDTGIS AFGEEVDAVDTGISRETSSDVALASHILTA K A A S R E 3 1 0 2 0 0 2 2 0 1 0 0 0 1 0 1 1 0 0 2 0 0 16 0 1635.774 O00273 O00273 214 229 DFFA DNA fragmentation factor subunit alpha yes yes 2 7.8778E-08 171.26 By MS/MS 7.5 0.5 1 1 2 1620700 1620700 0 107 86 109 244;245 176;177 176 2 59242 0 AAFGGSGGR VSVTSSTISSNVASKAAFGGSGGRGSSSGG SNVASKAAFGGSGGRGSSSGGGYSSGSSSY K A A G R G 2 1 0 0 0 0 0 4 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 0 778.3722 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 516 524 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.00016052 166.68 By MS/MS By MS/MS 5.12 2.87 2 2 2 2 2 1 1 2 2 1 8 9 20294000 11443000 8851700 + 108 52 110 246;247;248;249;250;251;252;253;254;255;256;257;258;259;260;261;262 178;179;180;181;182;183;184;185;186;187;188;189;190;191;192;193 185 16 2780300 29538000 AAFGGSGGRGSSSGGGYSSGSSSYGSGGR VSVTSSTISSNVASKAAFGGSGGRGSSSGG GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS K A A G R Q 2 2 0 0 0 0 0 12 0 0 0 0 0 1 0 10 0 0 2 0 0 0 29 1 2500.0599 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 516 544 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.0032585 52.402 By MS/MS By MS/MS 5 3.13 2 1 1 2 1 1 2 1 5 6 2110600 1132300 978250 + 109 52 111 263;264;265;266;267;268;269;270;271;272;273 194;195;196;197;198;199;200;201 199 8 149700 6369300 AAFGLSEAGFNTACVTK EFDAVVVGAGGAGLRAAFGLSEAGFNTACV FGLSEAGFNTACVTKLFPTRSHTVAAQGGI R A A T K L 4 0 1 0 1 0 1 2 0 0 1 1 0 2 0 1 2 0 0 1 0 0 17 0 1742.8298 P31040 P31040 76 92 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 0.0018362 115.83 By MS/MS 5.5 0.5 1 1 2 3555900 3555900 0 110 749 112 274;275 202 202 1 38987 0 AAFGQVR LFKKRLQVGGFEHARAAFGQVRRYKGLMDC VGGFEHARAAFGQVRRYKGLMDCAKQVLQK R A A V R R 2 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 7 0 747.40277 Q9HC21 Q9HC21 254 260 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.037598 109.7 By MS/MS 8.5 0.5 1 1 2 1589500 1589500 0 111 2556 113 276;277 203 203 1 121640 0 AAFLGCLTDVR RVARERLGHHLQGLRAAFLGCLTDVRQALA QGLRAAFLGCLTDVRQALAAPRVAGKEGPG R A A V R Q 2 1 0 1 1 0 0 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 11 0 1221.6176 Q9UID3 Q9UID3 416 426 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.0027177 117.31 By MS/MS 4.5 0.5 1 1 2 1577400 1577400 0 112 2791 114 278;279 204 204 1 63536 0 AAFLNFFR PLSSEPPAAKASAVRAAFLNFFRDRHGHRL AKASAVRAAFLNFFRDRHGHRLVPSASVRP R A A F R D 2 1 1 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 8 0 984.51814 Q5JTZ9 Q5JTZ9 44 51 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.0054704 135.35 By MS/MS 5 0.816 1 1 1 3 806330 806330 0 113 1611 115 280;281;282 205;206 205 2 16506 0 AAFLQYCR KNETIAQEDKIKLLKAAFLQYCRKDLGHAQ DKIKLLKAAFLQYCRKDLGHAQMVVDELFS K A A C R K 2 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1027.4909 Q8WUM0 Q8WUM0 524 531 NUP133 Nuclear pore complex protein Nup133 yes yes 2 0.017021 110.61 By MS/MS 3.5 0.5 1 1 2 964990 964990 0 114 2018 116 283;284 207 207 1 25447 0 AAFNSGK VGVNGFGRIGRLVTRAAFNSGKVDIVAIND RIGRLVTRAAFNSGKVDIVAINDPFIDLNY R A A G K V 2 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 7 0 693.34459 P04406 P04406 21 27 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 1;2 0.0067283 145.04 By MS/MS 8.2 1.17 2 1 1 1 5 14387000 14387000 0 115 452 117 285;286;287;288;289 208;209 208 2 438750 0 AAFQLGSPWR EGDKEDVDKAVKAARAAFQLGSPWRRMDAS VKAARAAFQLGSPWRRMDASHRGRLLNRLA R A A W R R 2 1 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 10 0 1131.5825 P05091 P05091 85 94 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00094159 125.57 By MS/MS 6 0 1 1 5761300 5761300 0 116 467 118 290 210 210 1 44926 0 AAFTAFEEAQLPR VAEEAADRHPERRMRAAFTAFEEAQLPRLK MRAAFTAFEEAQLPRLKQENPNMRLSQLKQ R A A P R L 4 1 0 0 0 1 2 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 13 0 1449.7252 Q96CT7 Q96CT7 171 183 CCDC124 Coiled-coil domain-containing protein 124 yes yes 2 5.8897E-08 190.57 By MS/MS 8.5 0.5 1 1 2 642150 642150 0 117 2141 119 291;292 211;212 211 2 93923 0 AAFVLPEFAR VAQMQLKYYNSDVHRAAFVLPEFARKALND SDVHRAAFVLPEFARKALNDVS________ R A A A R K 3 1 0 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 10 0 1119.6077 P19623 P19623 286 295 SRM Spermidine synthase yes yes 2 0.051374 69.812 By MS/MS 8 0 1 1 6668800 6668800 0 118 635 120 293 213 213 1 439940 0 AAGAGAGSAPR ______________________________ ______________________________ M A A P R W 5 1 0 0 0 0 0 3 0 0 0 0 0 0 1 1 0 0 0 0 0 0 11 0 884.44643 Q8WUD6 Q8WUD6 2 12 CHPT1 Cholinephosphotransferase 1 yes yes 2 9.2435E-05 153.05 By MS/MS 1 0 1 1 175150 175150 0 119 2015 121 294 214 214 1 8557.5 0 AAGDSNLKR VAFTGSTEVGHLIQKAAGDSNLKRVTLELG GHLIQKAAGDSNLKRVTLELGGKSPSIVLA K A A K R V 2 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 1 930.48829 P30837 P30837 273 281 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.0073345 140.35 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 11993000 11993000 0 120 747 122 295;296;297;298;299;300 215 215 0 250830 0 AAGGAVAAAPECR ______________________________ ______________________________ M A A C R L 6 1 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 13 0 1199.5717 Q9UL63 Q9UL63 2 14 MKLN1 Muskelin yes yes 2 0.00072749 120.09 By MS/MS 5 0 1 1 1853300 1853300 0 121 2822 123 301 216 216 1 76177 0 AAGGDHGSPDSYRSPLASR ______________________________ DHGSPDSYRSPLASRYASPEMCFVFSDRYK M A A S R Y 3 2 0 2 0 0 0 3 1 0 1 0 0 0 2 4 0 0 1 0 0 0 19 1 1899.8824 P30566 P30566 2 20 ADSL Adenylosuccinate lyase yes yes 3 0.021474 52.93 By MS/MS 6.5 0.5 1 1 2 5926800 5926800 0 122 744 124 302;303 217 217 1 50733 0 AAGHPGDPESQQR DVLDKASSLIEEAKKAAGHPGDPESQQRLA KKAAGHPGDPESQQRLAQVAKAVTQALNRC K A A Q R L 2 1 0 1 0 2 1 2 1 0 0 0 0 0 2 1 0 0 0 0 0 0 13 0 1348.612 Q9Y490 Q9Y490 1172 1184 TLN1 Talin-1 yes yes 3 0.0071368 91.123 By MS/MS 1.5 0.5 1 1 2 459570 459570 0 123 2947 125 304;305 218 218 1 22782 0 AAGLATMISTMRPDIDNMDEYVR YARVEGREIISNLAKAAGLATMISTMRPDI STMRPDIDNMDEYVRNTTARAFAVVASALG K A A V R N 3 2 1 3 0 0 1 1 0 2 1 0 3 0 1 1 2 0 1 1 0 0 23 1 2569.1975 O75533 O75533 603 625 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.00072567 75.912 By MS/MS 3 0 1 1 1097600 1097600 0 124 315 126 306 219 219 171;172;173 1 28654 0 AAGLVSDLDADSGLTLSR SEQEEYAKEAQQSLRAAGLVSDLDADSGLT LVSDLDADSGLTLSRRIRRAQLAHYNFQFV R A A S R R 3 1 0 3 0 0 0 2 0 0 4 0 0 0 0 3 1 0 0 1 0 0 18 0 1759.8952 Q9BW92 Q9BW92 638 655 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 1.2506E-18 254.89 By MS/MS 5.5 0.5 1 1 2 4591900 4591900 0 125 2391 127 307;308 220 220 1 63135 0 AAGNESFR ______________________________ DSVEELRAAGNESFRNGQYAEASALYGRAL R A A F R N 2 1 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 8 0 850.39333 Q15785 Q15785 14 21 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 0.020555 106.04 By MS/MS 8 0 1 1 1035600 1035600 0 126 1521 128 309 221 221 1 68317 0 AAGPSLSHTSGGTQSK STVSKAYGASKTFGKAAGPSLSHTSGGTQS AGPSLSHTSGGTQSKVVPIASLTPYQSKWT K A A S K V 2 0 0 0 0 1 0 3 1 0 1 1 0 0 1 4 2 0 0 0 0 0 16 0 1484.7219 P27694 P27694 168 183 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.014293 89.44 By MS/MS 5.5 0.5 1 1 2 1391500 1391500 0 127 708 129 310;311 222 222 1 37087 0 AAGTAAALAFLSQESR ______________________________ AGTAAALAFLSQESRTRAGGVGGLRVPAPV M A A S R T 6 1 0 0 0 1 1 1 0 0 2 0 0 1 0 2 1 0 0 0 0 0 16 0 1562.8053 O75607 O75607 2 17 NPM3 Nucleoplasmin-3 yes yes 2 1.2814E-06 151.66 By MS/MS 9.5 0.5 1 1 2 1528100 1528100 0 128 319 130 312;313 223;224 223 2 1024700 0 AAGTCGVLLR NNVESEPGRGAQYIRAAGTCGVLLRKVNGT AQYIRAAGTCGVLLRKVNGTAIIQLPSKRQ R A A L R K 2 1 0 0 1 0 0 2 0 0 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1016.5437 Q5T653 Q5T653 209 218 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 2 0.00099784 122.19 By MS/MS 8 0 1 1 2306300 2306300 0 129 1629 131 314 225 225 1 152140 0 AAGTLYTYPENWR ______________________________ ______________________________ M A A W R A 2 1 1 0 0 0 1 1 0 0 1 0 0 0 1 0 2 1 2 0 0 0 13 0 1540.731 P26641 P26641 2 14 EEF1G Elongation factor 1-gamma yes yes 2 5.2835E-18 219.5 By MS/MS 8 1.41 1 1 1 1 1 5 66849000 66849000 0 130 700 132 315;316;317;318;319 226;227;228;229;230 226 4 1149900 0 AAGTSSYWEDLRK ______________________________ ______________________________ M A A R K Q 2 1 0 1 0 0 1 1 0 0 1 1 0 0 0 2 1 1 1 0 0 0 13 1 1482.7103 O95249 O95249 2 14 GOSR1 Golgi SNAP receptor complex member 1 yes yes 2 5.3295E-07 179.42 By MS/MS 8.5 0.5 1 1 2 4911000 4911000 0 131 380 133 320;321 231 231 1 393940 0 AAGVEAAAEVAATEIK ______________________________ AGVEAAAEVAATEIKMEEESGAPGVPSGNG M A A I K M 7 0 0 0 0 0 3 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 16 0 1499.7831 P52272 P52272 2 17 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 3.0385E-09 222.25 By MS/MS 5.43 2.44 1 1 1 1 1 1 1 7 2760200 2760200 0 132 982 134 322;323;324;325;326;327;328 232;233;234;235;236;237 235 6 471680 0 AAGVVLEMIR RQASQGMVGQLAARRAAGVVLEMIREGKIA LAARRAAGVVLEMIREGKIAGRAVLIAGQP R A A I R E 2 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 2 0 0 10 0 1057.5954 Q9Y230 Q9Y230 55 64 RUVBL2 RuvB-like 2 yes yes 2 0.0075441 138.1 By MS/MS 6 0 1 1 0 0 0 133 2864 135 329 238 238 1 0 0 AAHFFSTLK VKVSKYWYLGPLKIKAAHFFSTLKEWPQTH GPLKIKAAHFFSTLKEWPQTHQASISYTGP K A A L K E 2 0 0 0 0 0 0 0 1 0 1 1 0 2 0 1 1 0 0 0 0 0 9 0 1020.5393 Q53H12 Q53H12 234 242 AGK Acylglycerol kinase, mitochondrial yes yes 2;3 0.0012644 119.21 By MS/MS 7.5 0.5 2 2 4 12618000 12618000 0 134 1587 136 330;331;332;333 239;240 240 2 252810 0 AAHGGSAASSALK ______________________________ ______________________________ M A A L K G 5 0 0 0 0 0 0 2 1 0 1 1 0 0 0 3 0 0 0 0 0 0 13 0 1126.5731 O94888 O94888 2 14 UBXN7 UBX domain-containing protein 7 yes yes 2 0.0057789 101.93 By MS/MS 5 0 1 1 720390 720390 0 135 355 137 334 241 241 1 29611 0 AAHLCAEAALR AQGTQVTGRKADVIKAAHLCAEAALRLVKP DVIKAAHLCAEAALRLVKPGNQNTQVTEAW K A A L R L 5 1 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1181.5975 Q9UQ80 Q9UQ80 145 155 PA2G4 Proliferation-associated protein 2G4 yes yes 2;3 0.0021375 119.75 By MS/MS 7 0 2 2 3180800 3180800 0 136 2859 138 335;336 242;243 242 2 56841 0 AAHLSYGR ______________________________ ______________________________ M A A G R V 2 1 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 1 0 0 0 8 0 873.4457 Q96AX1 Q96AX1 2 9 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 2 0.020688 89.296 By MS/MS 5 0 1 1 1581600 1581600 0 137 2124 139 337 244 244 1 65010 0 AAHSEGNTTAGLDMR DNAGYDSADLVAQLRAAHSEGNTTAGLDMR AAHSEGNTTAGLDMREGTIGDMAILGITES R A A M R E 3 1 1 1 0 0 1 2 1 0 1 0 1 0 0 1 2 0 0 0 0 0 15 0 1529.6893 P78371 P78371 467 481 CCT2 T-complex protein 1 subunit beta yes yes 2;3 6.88E-21 246.63 By MS/MS By matching 6.25 0.433 6 2 6 2 61618000 61557000 61955 138 1195 140;141 338;339;340;341;342;343;344;345 245;246;247;248 248 942 4 483660 190010 AAIEAFNK AYLSGMLRFEHQEWKAAIEAFNKCKTIYEK FEHQEWKAAIEAFNKCKTIYEKLASAFTEE K A A N K C 3 0 1 0 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 862.45487 Q9UHB9 Q9UHB9 206 213 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0080258 125.81 By MS/MS 5 0 1 1 3632700 3632700 0 139 2779 142 346 249 249 1 149320 0 AAIIADSSTFR SSPTFLRALMTAVCKAAIIADSSTFRVDTA AVCKAAIIADSSTFRVDTAVIKQRVPILLK K A A F R V 3 1 0 1 0 0 0 0 0 2 0 0 0 1 0 2 1 0 0 0 0 0 11 0 1150.5982 O43432 O43432 1473 1483 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 9.1178E-05 163.16 By MS/MS 2 0 1 1 479710 479710 0 140 200 143 347 250 250 1 23844 0 AAIISAEGDSK ERARFVVEKAEQQKKAAIISAEGDSKAAEL QQKKAAIISAEGDSKAAELIANSLATAGDG K A A S K A 3 0 0 1 0 0 1 1 0 2 0 1 0 0 0 2 0 0 0 0 0 0 11 0 1060.5401 P35232 P35232 209 219 PHB Prohibitin yes yes 2 0.0013771 128.6 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 26156000 25693000 463530 141 782 144 348;349;350 251;252 251 2 1954200 3954400 AAILPTSIFLTNK PSNHVIDRWLGEPIKAAILPTSIFLTNKKG IKAAILPTSIFLTNKKGFPVLSKMHQRLIF K A A N K K 2 0 1 0 0 0 0 0 0 2 2 1 0 1 1 1 2 0 0 0 0 0 13 0 1387.8075 O14744 O14744 228 240 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.00033546 141.08 By MS/MS 6 0.816 1 1 1 3 2731600 2731600 0 142 125 145 351;352;353 253 253 1 66425 0 AAILQTEVDALR HIEVLKESLTAKEQRAAILQTEVDALRLRL EQRAAILQTEVDALRLRLEEKESFLNKKTK R A A L R L 3 1 0 1 0 1 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1298.7194 O15083;Q8IUD2 O15083 485 496 ERC2;ERC1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 yes no 2 0.001134 149.94 By MS/MS 4 0.816 1 1 1 3 29212000 29212000 0 143 146 146 354;355;356 254 254 1 976770 0 AAIQSQLDGVR RREARKKASVEARLKAAIQSQLDGVRTGLS ARLKAAIQSQLDGVRTGLSQLHNALNDVKD K A A V R T 2 1 0 1 0 2 0 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1156.62 O60645 O60645 49 59 EXOC3 Exocyst complex component 3 yes yes 2 0.014325 94.465 By MS/MS 5.5 0.5 1 1 2 3215400 3215400 0 144 256 147 357;358 255 255 1 75392 0 AAKVFESIGK ______________________________ ______________________________ M A A G K F 2 0 0 0 0 0 1 1 0 1 0 2 0 1 0 1 0 0 0 1 0 0 10 1 1048.5917 P35232 P35232 2 11 PHB Prohibitin yes yes 2 0.035049 97.597 By MS/MS 8.5 0.5 1 1 2 1084400 1084400 0 145 782 148 359;360 256 256 1 109060 0 AALAPLPPLPAQFK ______________________________ MAALAPLPPLPAQFKSIQHHLRTAQEHDKR M A A F K S 4 0 0 0 0 1 0 0 0 0 3 1 0 1 4 0 0 0 0 0 0 0 14 0 1432.8442 Q9NP79 Q9NP79 2 15 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 2 0.0015953 107.15 By MS/MS 8 0.816 1 1 1 3 2674700 2674700 0 146 2575 149 361;362;363 257;258;259 258 3 76475 0 AALDTLGLR LLASALLALCSRPLRAALDTLGLRGPLGLW CSRPLRAALDTLGLRGPLGLWLHGLLSFLA R A A L R G 2 1 0 1 0 0 0 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 928.53418 O95873 O95873 204 212 C6orf47 Uncharacterized protein C6orf47 yes yes 2 0.0065163 112.41 By MS/MS 7 0 1 1 561460 561460 0 147 413 150 364 260 260 1 10033 0 AALEALGSCLNNK CRGLELIASENFCSRAALEALGSCLNNKYS SRAALEALGSCLNNKYSEGYPGKRYYGGAE R A A N K Y 3 0 2 0 1 0 1 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1359.6816 P34897 P34897 83 95 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 8.1341E-35 260.98 By MS/MS By matching 6 0 2 1 1 10942000 10918000 23735 148 777 151 365;366 261 261 1 85141 72794 AALEAVGGTVVLE EIKANVAKAEAEKIKAALEAVGGTVVLE__ IKAALEAVGGTVVLE_______________ K A A L E - 3 0 0 0 0 0 2 2 0 0 2 0 0 0 0 0 1 0 0 3 0 0 13 0 1227.6711 P52815 P52815 186 198 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 3.3094E-05 164.68 By MS/MS By MS/MS 9 0 2 1 1 6358900 6185600 173220 149 993 152 367;368 262;263;264 264 3 3550000 1866800 AALEEFSR LASVVDPRVASAAAKAALEEFSRVREEVPL VASAAAKAALEEFSRVREEVPLELVEAHVK K A A S R V 2 1 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 921.4556 Q92922 Q92922 717 724 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.042445 82.426 By MS/MS 4 0.816 1 1 1 3 1313700 1313700 0 150 2090 153 369;370;371 265 265 1 36296 0 AALETDENLLLCAPTGAGK EGFKTLNRIQSKLYRAALETDENLLLCAPT TDENLLLCAPTGAGKTNVALMCMLREIGKH R A A G K T 4 0 1 1 1 0 2 2 0 0 4 1 0 0 1 0 2 0 0 0 0 0 19 0 1942.967 O75643 O75643 491 509 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 3.3294E-26 227.92 By MS/MS 3 1.41 1 1 1 1 1 5 1068600 1068600 0 151 322 154 372;373;374;375;376 266 266 1 45363 0 AALETVDR VKLFDAPEAPLPSRKAALETVDRLTESLDF APLPSRKAALETVDRLTESLDFTDYASRII K A A D R L 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 873.4556 P42345 P42345 1134 1141 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.035409 101.54 By MS/MS 2 0 1 1 0 0 0 152 849 155 377 267 267 1 0 0 AALEYLEDIDLK LLLANTDVFLSKPQKAALEYLEDIDLKTLE PQKAALEYLEDIDLKTLEKEPRTFKAKELW K A A L K T 2 0 0 2 0 0 2 0 0 1 3 1 0 0 0 0 0 0 1 0 0 0 12 0 1391.7184 Q9BRX8 Q9BRX8 44 55 FAM213A Redox-regulatory protein FAM213A yes yes 2 0.0045085 125.74 By MS/MS 9 0 1 1 350250 350250 0 153 2333 156 378 268 268 1 201010 0 AALFALQNLFEEK DILLIETIFDTANAKAALFALQNLFEEKYA AKAALFALQNLFEEKYAPRPIFISGTIVDK K A A E K Y 3 0 1 0 0 1 2 0 0 0 3 1 0 2 0 0 0 0 0 0 0 0 13 0 1492.7926 Q99707 Q99707 204 216 MTR Methionine synthase yes yes 2 0.0015435 124.67 By MS/MS 3 0 1 1 45083 45083 0 154 2284 157 379 269 269 1 1176.9 0 AALGHLAGEAAAAPGPGTPCASR ______________________________ EAAAAPGPGTPCASRGARLPGPVSSARNPS M A A S R G 8 1 0 0 1 0 1 4 1 0 2 0 0 0 3 1 1 0 0 0 0 0 23 0 2102.0327 Q9H7E9 Q9H7E9 2 24 C8orf33 UPF0488 protein C8orf33 yes yes 3 0.034161 49.326 By MS/MS 8 0 1 1 1626100 1626100 0 155 2516 158 380 270 270 0 107280 0 AALGPLVTGLYDVQAFK ______________________________ LGPLVTGLYDVQAFKFGDFVLKSGLSSPIY R A A F K F 3 0 0 1 0 1 0 2 0 0 3 1 0 1 1 0 1 0 1 2 0 0 17 0 1761.9665 P11172 P11172 6 22 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 1.5262E-07 170 By MS/MS 6 0 1 1 1241100 1241100 0 156 548 159 381 271 271 1 9678.4 0 AALGPSSQNVTEYVVR ______________________________ ALGPSSQNVTEYVVRVPKNTTKKYNIMAFN M A A V R V 2 1 1 0 0 1 1 1 0 0 1 0 0 0 1 2 1 0 1 3 0 0 16 0 1689.8686 P35269 P35269 2 17 GTF2F1 General transcription factor IIF subunit 1 yes yes 2 3.2067E-06 141.38 By MS/MS 5 0 1 1 1741400 1741400 0 157 789 160 382 272 272 1 71580 0 AALGSPSHTFR ______________________________ ______________________________ M A A F R G 2 1 0 0 0 0 0 1 1 0 1 0 0 1 1 2 1 0 0 0 0 0 11 0 1142.5833 Q96HJ9 Q96HJ9 2 12 C7orf55 UPF0562 protein C7orf55 yes yes 2 0.00018518 142.98 By MS/MS 9.5 0.5 1 1 2 9309800 9309800 0 158 2192 161 383;384 273 273 1 9734800 0 AALKLEPSNK LAQQGEYSEAIPILRAALKLEPSNKTIHAE IPILRAALKLEPSNKTIHAELSKLVKKHAA R A A N K T 2 0 1 0 0 0 1 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 10 1 1069.6132 Q14318 Q14318 331 340 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 3 0.032889 73.841 By MS/MS By matching 6.33 0.471 2 1 2 1 7415800 7404100 11680 159 1428 162 385;386;387 274 274 1 60185 35821 AALLNFDEFAVSK INIGLTTLPPVHVIKAALLNFDEFAVSKDG IKAALLNFDEFAVSKDGIEKLLTMMPTEEE K A A S K D 3 0 1 1 0 0 1 0 0 0 2 1 0 2 0 1 0 0 0 1 0 0 13 0 1423.7347 Q9Y613 Q9Y613 718 730 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 6.6408E-06 174.42 By MS/MS 3.5 0.5 1 1 2 466900 466900 0 160 2993 163 388;389 275 275 1 12239 0 AALLSGPPGVGK KFGKFSGKDDGSSFKAALLSGPPGVGKTTT SFKAALLSGPPGVGKTTTASLVCQELGYSY K A A G K T 2 0 0 0 0 0 0 3 0 0 2 1 0 0 2 1 0 0 0 1 0 0 12 0 1065.6182 P35251 P35251 646 657 RFC1 Replication factor C subunit 1 yes yes 2 0.013501 93.111 By MS/MS 3 0 1 1 813020 813020 0 161 787 164 390 276 276 1 21224 0 AALLTER EEKDEAEDLLGRGSRAALLTERTRNEMTAE DLLGRGSRAALLTERTRNEMTAEEKRRAHQ R A A E R T 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 772.4443 Q9Y5B9 Q9Y5B9 457 463 SUPT16H FACT complex subunit SPT16 yes yes 2 0.022086 120.65 By MS/MS 3 1.41 1 1 1 1 1 5 9745700 9745700 0 162 2968 165 391;392;393;394;395 277 277 1 282080 0 AALNALQPPEFR ______________________________ PDKAALNALQPPEFRNESSLASTLKTLLFF K A A F R N 3 1 1 0 0 1 1 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 12 0 1325.7092 Q3ZAQ7 Q3ZAQ7 7 18 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 yes yes 2 0.0082631 98.943 By MS/MS 10 0 1 1 1477200 1477200 0 163 1571 166 396 278 278 1 1570100 0 AALNELLK LCALGLAMQDATLSKAALNELLKHIKHKDS QDATLSKAALNELLKHIKHKDSNYQRCLLT K A A L K H 2 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 870.51747 Q6PGP7 Q6PGP7 1143 1150 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.038612 95.815 By MS/MS 3.5 0.5 1 1 2 1158200 1158200 0 164 1714 167 397;398 279 279 1 30401 0 AALNLPEAASYDEVR RIIEESTHCGPQAVRAALNLPEAASYDEVR AALNLPEAASYDEVRGKWQDAHLGKDQRDF R A A V R G 4 1 1 1 0 0 2 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 15 0 1617.7999 O95602 O95602 829 843 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.012363 96.82 By MS/MS 2 0 1 1 271770 271770 0 165 401 168 399 280 280 1 13508 0 AALPLTTSDTK QVVNQVWEAADVLIKAALPLTTSDTKTVSE VLIKAALPLTTSDTKTVSEWISQMATLPQA K A A T K T 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 3 0 0 0 0 0 11 0 1116.6027 Q7Z6Z7 Q7Z6Z7 1498 1508 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0057884 104.42 By MS/MS 1.5 0.5 1 1 2 1263200 1263200 0 166 1803 169 400;401 281;282 281 2 62275 0 AALQALR QELQTAKKYGTKNKRAALQALRRKKRFEQQ KYGTKNKRAALQALRRKKRFEQQLAQTDGT R A A L R R 3 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 741.44972 Q9BY43 Q9BY43 61 67 CHMP4A Charged multivesicular body protein 4a yes yes 2 0.0083002 159.75 By MS/MS 3 1.41 1 1 1 1 1 5 3040400 3040400 0 167 2408 170 402;403;404;405;406 283;284;285 283 3 124800 0 AALQEELQLCK FCFTPHTEEGCLSERAALQEELQLCKGLVQ LSERAALQEELQLCKGLVQALQTKVTQQGL R A A C K G 2 0 0 0 1 2 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1301.6649 P49327 P49327 1132 1142 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.0184E-22 246.93 By MS/MS By MS/MS 2.86 1.25 1 2 2 1 1 5 2 50830000 50723000 107110 168 915 171 407;408;409;410;411;412;413 286;287;288;289;290;291;292;293 292 8 1961800 123030 AALQELLSK AVVSERLKIRGSLARAALQELLSKGLIKLV RGSLARAALQELLSKGLIKLVSKHRAQVIY R A A S K G 2 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 971.56515 P62851 P62851 86 94 RPS25 40S ribosomal protein S25 yes yes 2 5.4343E-08 200.86 By MS/MS By MS/MS 9.25 0.829 1 1 2 3 1 24710000 24563000 146150 169 1150 172 414;415;416;417 294;295;296 295 3 22743000 3748700 AALRQPQVAELLAEAR ______________________________ ALRQPQVAELLAEARRAFREEFGAEPELAV M A A A R R 5 2 0 0 0 2 2 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 16 1 1734.9741 P51570 P51570 2 17 GALK1 Galactokinase yes yes 2;3 0.00094384 129.76 By MS/MS 7 0 2 2 1184200 1184200 0 170 967 173 418;419 297;298 297 2 21163 0 AALSALESFLK VLLKWCAHTNVELKKAALSALESFLKQVSN ELKKAALSALESFLKQVSNMVAKNAEMHKN K A A L K Q 3 0 0 0 0 0 1 0 0 0 3 1 0 1 0 2 0 0 0 0 0 0 11 0 1148.6441 P78527 P78527 311 321 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00095109 147.4 By MS/MS 3.8 1.72 1 1 1 1 1 5 443440 443440 0 171 1197 174 420;421;422;423;424 299;300;301 301 3 12549 0 AALSASEGEEVPQDK RISGLGLTPEQKQKKAALSASEGEEVPQDK AALSASEGEEVPQDKAPSHVPFLLIGGGTA K A A D K A 3 0 0 1 0 1 3 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1529.7209 O95831 O95831 113 127 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.2549E-28 242.97 By MS/MS 7.5 2.5 1 1 2 7653000 7653000 0 172 409 175 425;426 302;303 302 2 840690 0 AALSEEELEK AVKREAALPPVSPLKAALSEEELEKKSKAI VSPLKAALSEEELEKKSKAIIEEYLHLNDM K A A E K K 2 0 0 0 0 0 4 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1117.5503 Q04637 Q04637 1235 1244 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 9.7145E-06 175.91 By MS/MS 2 0 1 1 0 0 0 173 1264 176 427 304 304 1 0 0 AALSEEELEKK AVKREAALPPVSPLKAALSEEELEKKSKAI SPLKAALSEEELEKKSKAIIEEYLHLNDMK K A A K K S 2 0 0 0 0 0 4 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1245.6452 Q04637 Q04637 1235 1245 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 5.9134E-07 192.91 By MS/MS 3.45 1.88 2 2 2 2 1 1 1 11 23089000 23089000 0 174 1264 177 428;429;430;431;432;433;434;435;436;437;438 305;306 306 2 994890 0 AALSEEELEKKSK AVKREAALPPVSPLKAALSEEELEKKSKAI LKAALSEEELEKKSKAIIEEYLHLNDMKEA K A A S K A 2 0 0 0 0 0 4 0 0 0 2 3 0 0 0 2 0 0 0 0 0 0 13 2 1460.7722 Q04637 Q04637 1235 1247 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 4 0.027757 64.945 By MS/MS 2 0 1 1 386890 386890 0 175 1264 178 439 307 307 1 19231 0 AALSEEELER ESAKPEISAMSAHDKAALSEEELERKSKSI SAHDKAALSEEELERKSKSIIDEFLHINDF K A A E R K 2 1 0 0 0 0 4 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1145.5564 O43432 O43432 1215 1224 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0063248 130.66 By MS/MS 2 0 1 1 0 0 0 176 200 179 440 308 308 1 0 0 AALTLTPSAVNK ATVRAVSKRKLQPTRAALTLTPSAVNKIKQ PTRAALTLTPSAVNKIKQLLKDKPEHVGVK R A A N K I 3 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 12 0 1184.6765 Q9BUE6 Q9BUE6 23 34 ISCA1 Iron-sulfur cluster assembly 1 homolog, mitochondrial yes yes 2 0.0010475 132.78 By MS/MS By matching 9.5 0.5 1 1 1 1 375680 286090 89585 177 2362 180 441;442 309 309 1 304090 965470 AALVDLEPGTMDSVR NVYYNESSSQKYVPRAALVDLEPGTMDSVR AALVDLEPGTMDSVRSGPFGQLFRPDNFIF R A A V R S 2 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1572.7818 Q9BUF5 Q9BUF5 63 77 TUBB6 Tubulin beta-6 chain yes yes 2 9.4971E-06 148.78 By MS/MS 6.5 0.5 1 1 2 6386800 6386800 0 178 2363 181 443;444 310 310 1 54842 0 AALVLEDGSVLR ______________________________ ______________________________ M A A L R G 2 1 0 1 0 0 1 1 0 0 3 0 0 0 0 1 0 0 0 2 0 0 12 0 1241.698 P27708 P27708 2 13 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 2.0488E-07 179.37 By MS/MS 5.53 3.07 2 2 2 1 1 2 1 2 2 2 17 10649000 10649000 0 179 709 182 445;446;447;448;449;450;451;452;453;454;455;456;457;458;459;460;461 311;312;313;314;315;316;317;318;319;320;321;322;323;324;325;326;327 321 17 1187000 0 AAMAVGGAGGSR ______________________________ ______________________________ M A A S R V 4 1 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 1 0 0 12 0 1003.4869 O14744 O14744 2 13 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 8.1288E-05 148.91 By MS/MS By MS/MS 3.62 1.8 2 1 5 5 3 2553400 1817200 736170 180 125 183;184 462;463;464;465;466;467;468;469 328;329;330;331;332 332 82 5 76366 2178300 AAMEALVVEVTK LQISHEAAACITGLRAAMEALVVEVTKQPA GLRAAMEALVVEVTKQPAIISQLDPVNERM R A A T K Q 3 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 3 0 0 12 0 1259.6795 Q08211 Q08211 1105 1116 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0018816 136.5 By MS/MS 2.5 0.5 1 1 2 616430 616430 0 181 1287 185 470;471 333 333 1 17002 0 AANDAGYFNDEMAPIEVK EECDKYALQSQQRWKAANDAGYFNDEMAPI DAGYFNDEMAPIEVKTKKGKQTMQVDEHAR K A A V K T 4 0 2 2 0 0 2 1 0 1 0 1 1 1 1 0 0 0 1 1 0 0 18 0 1953.8778 P42765 P42765 192 209 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 1.3915E-25 227.91 By MS/MS 7 0 1 1 748780 748780 0 182 855 186 472 334 334 1 13381 0 AANGVVLATEK ALAAVAGGAPSVGIKAANGVVLATEKKQKS VGIKAANGVVLATEKKQKSILYDERSVHKV K A A E K K 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1071.5924 P25787 P25787 40 50 PSMA2 Proteasome subunit alpha type-2 yes yes 2 0.00033801 149.33 By MS/MS 8.5 0.5 1 1 2 1690700 1690700 0 183 689 187 473;474 335 335 1 892710 0 AANGVVLATEKK ALAAVAGGAPSVGIKAANGVVLATEKKQKS GIKAANGVVLATEKKQKSILYDERSVHKVE K A A K K Q 3 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 2 0 0 12 1 1199.6874 P25787 P25787 40 51 PSMA2 Proteasome subunit alpha type-2 yes yes 2 0.00012388 169.93 By MS/MS 9 0 1 1 375620 375620 0 184 689 188 475 336 336 1 215570 0 AANNGALPPDLSYIVR FDYFPKPYPNSEAARAANNGALPPDLSYIV ANNGALPPDLSYIVRARHGGEDYVFSLLTG R A A V R A 3 1 2 1 0 0 0 1 0 1 2 0 0 0 2 1 0 0 1 1 0 0 16 0 1669.8788 P08574 P08574 187 202 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 0.012222 88.552 By MS/MS 8.5 0.5 1 1 2 2602500 2602500 0 185 505 189 476;477 337;338 337 2 294970 0 AANNIASLLTK CFHIAGDNNPLAVNRAANNIASLLTKSQIK AVNRAANNIASLLTKSQIKEGKPSWGLPID R A A T K S 3 0 2 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1114.6346 Q9BV44 Q9BV44 359 369 THUMPD3 THUMP domain-containing protein 3 yes yes 2 0.0083888 99.815 By MS/MS 5.5 0.5 1 1 2 1981500 1981500 0 186 2371 190 478;479 339 339 1 24803 0 AANPGCSLEDFVR RMQSACLLSDMESFKAANPGCSLEDFVRWY FKAANPGCSLEDFVRWYSPRDYIEEEVIDE K A A V R W 2 1 1 1 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 13 0 1434.6562 Q15042 Q15042 688 700 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 0.00010607 173.72 By MS/MS 4 0.816 1 1 1 3 3634400 3634400 0 187 1469 191 480;481;482 340 340 1 98389 0 AANSLEAFIFETQDK QDLTLRDLEKQEREKAANSLEAFIFETQDK AANSLEAFIFETQDKLYQPEYQEVSTEEQR K A A D K L 3 0 1 1 0 1 2 0 0 1 1 1 0 2 0 1 1 0 0 0 0 0 15 0 1682.8152 Q9Y4L1 Q9Y4L1 739 753 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 4.4509E-07 187.63 By MS/MS 3 0 1 1 155620 155620 0 188 2955 192 483 341 341 1 4062.5 0 AANSSGQGFQNK ______________________________ ______________________________ M A A N K N 2 0 2 0 0 2 0 2 0 0 0 1 0 1 0 2 0 0 0 0 0 0 12 0 1207.5582 Q9NRY2 Q9NRY2 2 13 INIP SOSS complex subunit C yes yes 2 0.0014876 111.27 By MS/MS 10 0 1 1 213140 213140 0 189 2617 193 484 342 342 1 226550 0 AANVLLSEQGDVK LDYLHSERKIHRDIKAANVLLSEQGDVKLA IKAANVLLSEQGDVKLADFGVAGQLTDTQI K A A V K L 2 0 1 1 0 1 1 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 13 0 1342.7092 O00506;Q9P289 O00506 143 155 STK25;STK26 Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26 yes no 2 0.010375 94.82 By MS/MS 6 0 1 1 2378000 2378000 0 190 102 194 485 343 343 1 18544 0 AANYDFYQLLEEK CGRKQAPRDDPFDIKAANYDFYQLLEEKCC IKAANYDFYQLLEEKCCGKLDHINFPVFEP K A A E K C 2 0 1 1 0 1 2 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 13 0 1602.7566 Q8ND04 Q8ND04 628 640 SMG8 Protein SMG8 yes yes 2 1.7985E-17 215.72 By MS/MS 4 0 1 1 241830 241830 0 191 1956 195 486 344 344 1 6601.8 0 AANYSSTSTR ______________________________ ______________________________ M A A T R R 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 1 0 0 0 10 0 1056.4836 Q9BTV4 Q9BTV4 2 11 TMEM43 Transmembrane protein 43 yes yes 2 0.014923 81.338 By MS/MS 7 0 1 1 708520 708520 0 192 2353 196 487 345 345 1 12661 0 AANYSSTSTRR ______________________________ ______________________________ M A A R R E 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 1 0 0 0 11 1 1212.5847 Q9BTV4 Q9BTV4 2 12 TMEM43 Transmembrane protein 43 yes yes 2 0.01183 111.06 By MS/MS By matching 8 1.22 2 1 1 3 1 4723800 4674400 49373 193 2353 197 488;489;490;491 346 346 1 216720 202680 AAPASSAGASDAR ______________________________ PRAAPASSAGASDARLLAPPGRNPFVHELR R A A A R L 6 1 0 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1130.5316 Q8NF37 Q8NF37 10 22 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 8.5039E-05 155.97 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 6454400 6438900 15536 194 1967 198 492;493;494;495;496;497 347 347 1 85730 47646 AAPAVQTK LRFSIRPLSCSSQLRAAPAVQTKTKKTLAK SCSSQLRAAPAVQTKTKKTLAKPNIRNVVV R A A T K T 3 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 8 0 784.4443 P55084 P55084 34 41 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.031717 98.523 By MS/MS 6.5 0.5 1 1 2 5408500 5408500 0 195 1027 199 498;499 348 348 1 80352 0 AAPEERDLTQEQTEK ______________________________ AAPEERDLTQEQTEKLLQFQDLTGIESMDQ M A A E K L 2 1 0 1 0 2 4 0 0 0 1 1 0 0 1 0 2 0 0 0 0 0 15 1 1743.8275 Q96CS3 Q96CS3 2 16 FAF2 FAS-associated factor 2 yes yes 2 4.9449E-14 206.32 By MS/MS By MS/MS 5.8 2.75 1 1 1 1 2 1 1 1 1 9 1 105430000 105250000 178180 196 2140 200 500;501;502;503;504;505;506;507;508;509 349;350;351;352;353;354;355 351 7 2794800 546460 AAPFSLEYR ______________________________ FSTEERAAPFSLEYRVFLKNEKGQYISPFH R A A Y R V 2 1 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 9 0 1052.5291 Q15181 Q15181 10 18 PPA1 Inorganic pyrophosphatase yes yes 2 0.0072216 110.87 By MS/MS 8 0 1 1 696210 696210 0 197 1485 201 510 356 356 1 45929 0 AAPGAGDAAAGSGAEFAGGDGAAR DGGDSGEGSAGEGERAAPGAGDAAAGSGAE AGSGAEFAGGDGAARGGGAAAPLSPGATVA R A A A R G 10 1 0 2 0 0 1 7 0 0 0 0 0 1 1 1 0 0 0 0 0 0 24 0 1973.8827 Q5K4L6 Q5K4L6 133 156 SLC27A3 Long-chain fatty acid transport protein 3 yes yes 2 2.0291E-30 260.25 By MS/MS 5 0 1 1 1413500 1413500 0 198 1613 202 511 357 357 1 58100 0 AAPLAGFGYGLPISR YMYSTAPRPSLEPTRAAPLAGFGYGLPISR AAPLAGFGYGLPISRLYARYFQGDLKLYSM R A A S R L 3 1 0 0 0 0 0 3 0 1 2 0 0 1 2 1 0 0 1 0 0 0 15 0 1488.8089 Q15120 Q15120 318 332 PDK3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 2 3.4603E-06 155 By MS/MS 6.5 0.5 1 1 2 3539900 3539900 0 199 1481 203 512;513 358;359 359 2 30438 0 AAPPEPGEPEERK ______________________________ ______________________________ M A A R K S 2 1 0 0 0 0 4 1 0 0 0 1 0 0 4 0 0 0 0 0 0 0 13 1 1405.6838 Q5RI15 Q5RI15 2 14 COX20 Cytochrome c oxidase protein 20 homolog yes yes 2 0.050067 79.07 By MS/MS 10 0 1 1 617500 617500 0 200 1614 204 514 360 360 1 656340 0 AAPPGEYFSVGSQVSCR ______________________________ PPGEYFSVGSQVSCRTCQEQRLQGEVVAFD M A A C R T 2 1 0 0 1 1 1 2 0 0 0 0 0 1 2 3 0 0 1 2 0 0 17 0 1810.8308 Q3MHD2 Q3MHD2 2 18 LSM12 Protein LSM12 homolog yes yes 2 3.4773E-06 138.87 By MS/MS 9 0 1 1 1013100 1013100 0 201 1568 205 515 361 361 1 581400 0 AAPVDLELK ______________________________ ______________________________ M A A L K K 2 0 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 0 0 1 0 0 9 0 954.5386 O60925 O60925 2 10 PFDN1 Prefoldin subunit 1 yes yes 2 0.034874 58.981 By MS/MS 10 0 1 1 160670 160670 0 202 274 206 516 362 362 1 170770 0 AAQAPDGASEPR KEKKSYDRQRWGFRRAAQAPDGASEPRASA FRRAAQAPDGASEPRASASRPQPAPADGAD R A A P R A 4 1 0 1 0 1 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1168.5473 P11274 P11274 80 91 BCR Breakpoint cluster region protein yes yes 2 0.0018027 113.44 By MS/MS 3 0 1 1 0 0 0 203 551 207 517 363 363 1 0 0 AAQAPSSFQLLYDLK EGGKGALALAQAVQRAAQAPSSFQLLYDLK AAQAPSSFQLLYDLKLPVEDKIRIIAQKIY R A A L K L 3 0 0 1 0 2 0 0 0 0 3 1 0 1 1 2 0 0 1 0 0 0 15 0 1650.8617 P11586 P11586 805 819 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00029141 124.45 By MS/MS 4.5 0.5 1 1 2 2593200 2593200 0 204 556 208 518;519 364 364 1 71889 0 AAQDFCQLVAQK VKVLSPEDGKADIVRAAQDFCQLVAQKQKR IVRAAQDFCQLVAQKQKRPTDLDVDTLASL R A A Q K Q 3 0 0 1 1 3 0 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1377.6711 Q96E22 Q96E22 203 214 NUS1 Dehydrodolichyl diphosphate syntase complex subunit NUS1 yes yes 2 0.00028728 148.56 By MS/MS 8 0 1 1 1011500 1011500 0 205 2157 209 520 365 365 1 66728 0 AAQDLCEEALR FMKSVKLEWVQDNIRAAQDLCEEALRHYED DNIRAAQDLCEEALRHYEDFPKLWMMKGQI R A A L R H 3 1 0 1 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1274.5925 O94906 O94906 693 703 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 2.1854E-05 173.64 By MS/MS 4 0 1 1 1472500 1472500 0 206 358 210 521 366 366 1 40198 0 AAQEEYVK ASALKAWGGKKENLKAAQEEYVKRALANSL GKKENLKAAQEEYVKRALANSLACQGKYTP K A A V K R 2 0 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 8 0 936.45526 P04075 P04075 323 330 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.051613 90.709 By MS/MS 7.5 0.5 1 1 2 1553700 1553700 0 207 444 211 522;523 367 367 1 48434 0 AAQEEYVKR ASALKAWGGKKENLKAAQEEYVKRALANSL KKENLKAAQEEYVKRALANSLACQGKYTPS K A A K R A 2 1 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 9 1 1092.5564 P04075 P04075 323 331 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.003219 153.08 By MS/MS By matching 7.33 0.471 2 1 2 1 4245600 4236200 9382.1 208 444 212 524;525;526 368;369 368 2 146360 38515 AAQELQEGQR LCGGSAGSTVAVAVKAAQELQEGQRCVVIL AVAVKAAQELQEGQRCVVILPDSVRNYMTK K A A Q R C 2 1 0 0 0 3 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1128.5523 P0DN79;P35520 P0DN79 360 369 CBS Cystathionine beta-synthase yes no 2 0.00044093 159.34 By MS/MS 5.5 0.5 1 1 2 3744500 3744500 0 209 530 213 527;528 370 370 1 48517 0 AAQFDVVK SEMKKIADQVIPKQRAAQFDVVKHMRQDQI QVIPKQRAAQFDVVKHMRQDQITNGMVNAI R A A V K H 2 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 8 0 876.47052 Q9NW08 Q9NW08 397 404 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.051613 90.709 By MS/MS 3 0 1 1 633340 633340 0 210 2664 214 529 371 371 1 16533 0 AAQGEPQVQFK ______________________________ ______________________________ M A A F K L 2 0 0 0 0 3 1 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 11 0 1201.6091 P62826 P62826 2 12 RAN GTP-binding nuclear protein Ran yes yes 2 0.00038654 133.23 By MS/MS 9 0.816 1 1 1 3 6645100 6645100 0 211 1146 215 530;531;532 372 372 1 3641100 0 AAQGVGPGPGSAAPPGLEAAR ______________________________ PGPGSAAPPGLEAARQKLALRRKKVLSTEE M A A A R Q 6 1 0 0 0 1 1 5 0 0 1 0 0 0 4 1 0 0 0 1 0 0 21 0 1829.9384 Q6NZ67;Q6P582 Q6NZ67 2 22 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A yes no 2 6.3536E-25 197.29 By MS/MS 9.5 0.5 1 1 2 3201300 3201300 0 212 1696 216 533;534 373 373 1 1889500 0 AAQIPESDQIKQFK ______________________________ MAAQIPESDQIKQFKEFLGTYNKLTETCFL M A A F K E 2 0 0 1 0 3 1 0 0 2 0 2 0 1 1 1 0 0 0 0 0 0 14 1 1601.8413 Q9Y5J7 Q9Y5J7 2 15 TIMM9 Mitochondrial import inner membrane translocase subunit Tim9 yes yes 2 0.01253 107.11 By MS/MS 10 0 1 1 239800 239800 0 213 2969 217 535 374 374 1 254890 0 AAQIPIVATTSTPGIVR ______________________________ QIPIVATTSTPGIVRNSKKRPASPSHNGSS M A A V R N 3 1 0 0 0 1 0 1 0 3 0 0 0 0 2 1 3 0 0 2 0 0 17 0 1693.9727 Q6PI98 Q6PI98 2 18 INO80C INO80 complex subunit C yes yes 2 0.0017947 133.16 By MS/MS 9 0 1 1 306590 306590 0 214 1716 218 536 375 375 1 175950 0 AAQLAIR AHNVSSKNRKAIVERAAQLAIRVTNPNARL NRKAIVERAAQLAIRVTNPNARLRSEENE_ R A A I R V 3 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 741.44972 P62910 P62910 115 121 RPL32 60S ribosomal protein L32 yes yes 2 0.019138 128.75 By MS/MS 8 0.816 1 1 1 3 1381100 1381100 0 215 1160 219 537;538;539 376 376 1 390680 0 AAQLCGAGMAAVVDK DSILVKTVCGVVSRRAAQLCGAGMAAVVDK AAQLCGAGMAAVVDKIRENRGLDRLNVTVG R A A D K I 5 0 0 1 1 1 0 2 0 0 1 1 1 0 0 0 0 0 0 2 0 0 15 0 1460.7116 P19367 P19367 830 844 HK1 Hexokinase-1 yes yes 2 7.986E-10 177.16 By MS/MS 4 0 1 1 754640 754640 0 216 630 220 540 377 377 420 1 20601 0 AAQLGFK TVIGSGPGGYVAAIKAAQLGFKTVCIEKNE GGYVAAIKAAQLGFKTVCIEKNETLGGTCL K A A F K T 2 0 0 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 733.41227 P09622 P09622 60 66 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 0.01362 143.97 By MS/MS 6 0 1 1 2528100 2528100 0 217 518 221 541 378 378 1 19714 0 AAQLVDKDSTFLSTLEHHLSR EQLDSVMDWLTNQPRAAQLVDKDSTFLSTL KDSTFLSTLEHHLSRYLKDVKQHHVKADKR R A A S R Y 2 1 0 2 0 1 1 0 2 0 4 1 0 1 0 3 2 0 0 1 0 0 21 1 2367.2183 Q969V3 Q969V3 465 485 NCLN Nicalin yes yes 4 0.019939 57.045 By MS/MS 6 0 1 1 4027500 4027500 0 218 2109 222 542 379 379 1 31407 0 AAQNISK ALSKNPGYIKLRKIRAAQNISKTIATSQNR YIKLRKIRAAQNISKTIATSQNRIYLTADN R A A S K T 2 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 730.39735 Q99623 Q99623 256 262 PHB2 Prohibitin-2 yes yes 2 0.010104 153.73 By MS/MS By MS/MS 8 0 2 1 1 2465200 2376900 88345 219 2277 223 543;544 380;381 380 2 156800 753690 AAQQAASSSGQGQQAQTPTGK HQYDYTFDWTMLKQKAAQQAASSSGQGQQA SSSGQGQQAQTPTGKQTDKTKSNMKGF___ K A A G K Q 5 0 0 0 0 6 0 3 0 0 0 1 0 0 1 3 2 0 0 0 0 0 21 0 2000.9512 P48729 P48729 305 325 CSNK1A1 Casein kinase I isoform alpha yes yes 3 0.0033827 76.329 By MS/MS 8 0 1 1 216450 216450 0 220 911 224 545 382 382 1 14279 0 AAQQQTVQQQPLAGSR SHELSSPVDSPSSLRAAQQQTVQQQPLAGS AQQQTVQQQPLAGSRRNQESNFNLTHYGTQ R A A S R R 3 1 0 0 0 6 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 16 0 1709.8809 Q13233 Q13233 517 532 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 5.8564E-06 146.79 By MS/MS 2 0 1 1 100890 100890 0 221 1350 225 546 383 383 1 5014.9 0 AAQSANISVR CSIEESFQRFDAILKAAQSANISVRGYVSC DAILKAAQSANISVRGYVSCALGCPYEGKI K A A V R G 3 1 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 10 0 1015.5411 P35914 P35914 156 165 HMGCL Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 2 0.0052552 106.62 By MS/MS 7.5 0.5 1 1 2 2086700 2086700 0 222 800 226 547;548 384 384 1 131270 0 AAQSTAMNR ETKNFSGAELEGLVRAAQSTAMNRHIKAST LEGLVRAAQSTAMNRHIKASTKVEVDMEKA R A A N R H 3 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 9 0 948.44471 P46459 P46459 447 455 NSF Vesicle-fusing ATPase yes yes 2 0.0026132 123.21 By MS/MS 5 0 1 1 323850 323850 0 223 881 227 549 385 385 1 13312 0 AAREPNIDR RAPPIDRSILPTAPRAAREPNIDRSRLPKS LPTAPRAAREPNIDRSRLPKSPPYTAFLGN R A A D R S 2 2 1 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 1 1040.5363 P23588 P23588 79 87 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.025394 106.88 By MS/MS By MS/MS 7.29 1.83 2 1 2 1 1 4 3 4104200 3900900 203270 224 672 228 550;551;552;553;554;555;556 386;387 386 2 1635900 642240 AASAAAAELQASGGPR ______________________________ ASAAAAELQASGGPRHPVCLLVLGMAGSGK M A A P R H 7 1 0 0 0 1 1 2 0 0 1 0 0 0 1 2 0 0 0 0 0 0 16 0 1426.7165 Q9HCN4 Q9HCN4 2 17 GPN1 GPN-loop GTPase 1 yes yes 2 1.6457E-10 180.61 By MS/MS 7 0 1 1 2935000 2935000 0 225 2562 229 557 388 388 1 52450 0 AASAAAASAAAASAASGSPGPGEGSAGGEK ______________________________ SGSPGPGEGSAGGEKRSTAPSAAASASASA M A A E K R 13 0 0 0 0 0 2 6 0 0 0 1 0 0 2 6 0 0 0 0 0 0 30 0 2386.0997 Q13263 Q13263 2 31 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 1.2004E-26 171.29 By MS/MS 4 0 2 2 5644200 5644200 0 226 1351 230 558;559 389;390 390 2 154080 0 AASAAAASAAAASAASGSPGPGEGSAGGEKR ______________________________ GSPGPGEGSAGGEKRSTAPSAAASASASAA M A A K R S 13 1 0 0 0 0 2 6 0 0 0 1 0 0 2 6 0 0 0 0 0 0 31 1 2542.2008 Q13263 Q13263 2 32 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 1.6194E-25 161.55 By MS/MS By MS/MS 5.53 2.72 1 2 2 3 2 2 2 1 2 2 18 1 84657000 84265000 391250 227 1351 231 560;561;562;563;564;565;566;567;568;569;570;571;572;573;574;575;576;577;578 391;392;393;394;395;396;397;398;399;400;401;402;403 397 13 5483900 817550 AASAAFQENVGR LVIAAVFDRDINCRRAASAAFQENVGRQGT CRRAASAAFQENVGRQGTFPHGIDILTTAD R A A G R Q 4 1 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 12 0 1219.5945 Q9BTW9 Q9BTW9 509 520 TBCD Tubulin-specific chaperone D yes yes 2 6.9212E-24 240.37 By MS/MS By matching 4.33 0.471 2 1 2 1 3680200 3667800 12364 228 2354 232 579;580;581 404 404 1 103450 25836 AASAATAAPTATPAAQESGTIPK RPREALSTNECKARRAASAATAAPTATPAA PTATPAAQESGTIPKKRQEVMKWNGWGYND R A A P K K 9 0 0 0 0 1 1 1 0 1 0 1 0 0 3 2 4 0 0 0 0 0 23 0 2082.0593 O00116 O00116 63 85 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2;3 1.6869E-08 166.64 By MS/MS 5 0 2 2 8166800 8166800 0 229 67 233 582;583 405;406 405 2 335690 0 AASAGQEPLHNEELAGAGR LLVGFILFLTRSRGRAASAGQEPLHNEELA GQEPLHNEELAGAGRVAQPGPLEPEEPRAG R A A G R V 5 1 1 0 0 1 3 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 19 0 1876.9028 Q96HY6 Q96HY6 28 46 DDRGK1 DDRGK domain-containing protein 1 yes yes 2;3 1.852E-07 147.75 By MS/MS By matching 7 0 3 2 1 12263000 12240000 22197 230 2197 234 584;585;586 407;408 408 2 218740 91121 AASAPYFEVLEK TGDSQAQELCLYLTKAASAPYFEVLEKWIY LTKAASAPYFEVLEKWIYRGIIHDPYSEFM K A A E K W 3 0 0 0 0 0 2 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 12 0 1323.6711 Q9BSJ2 Q9BSJ2 382 393 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.0010879 132.32 By MS/MS 4.5 0.5 1 1 2 2664700 2664700 0 231 2338 235 587;588 409 409 1 78082 0 AASDIAMTELPPTHPIR NDRKEAAENSLVAYKAASDIAMTELPPTHP SDIAMTELPPTHPIRLGLALNFSVFYYEIL K A A I R L 3 1 0 1 0 0 1 0 1 2 1 0 1 0 3 1 2 0 0 0 0 0 17 0 1818.9298 P62258 P62258 154 170 YWHAE 14-3-3 protein epsilon yes yes 2;3 0.00026848 124.12 By MS/MS 8 0 2 2 3266600 3266600 0 232 1121 236 589;590 410;411;412 412 874 3 215500 0 AASEWLLR NKVDYDRIRDVGPDRAASEWLLRCGAMVRY RDVGPDRAASEWLLRCGAMVRYHGQERWQK R A A L R C 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 8 0 944.50797 Q99766 Q99766 65 72 ATP5S ATP synthase subunit s, mitochondrial yes yes 2 0.00089423 149.4 By MS/MS 9.5 0.5 1 1 2 381280 381280 0 233 2290 237 591;592 413 413 1 295520 0 AASGYPVKVPLEVQEADEAK RVEAQRQAQRLRERRAASGYPVKVPLEVQE PVKVPLEVQEADEAKLQQTEAELRKVDEAI R A A A K L 4 0 0 1 0 1 3 1 0 0 1 2 0 0 2 1 0 0 1 3 0 0 20 1 2100.0739 P26640 P26640 1223 1242 VARS Valine--tRNA ligase yes yes 3 0.0034492 77.357 By MS/MS 3 0 1 1 1233600 1233600 0 234 699 238 593 414 414 1 32204 0 AASIFGGAKPVDTAAR PKEDDSSASTSQSTRAASIFGGAKPVDTAA ASIFGGAKPVDTAAREREVEERLQKEQEKL R A A A R E 5 1 0 1 0 0 0 2 0 1 0 1 0 1 1 1 1 0 0 1 0 0 16 1 1530.8154 P23588 P23588 357 372 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 5.8116E-05 142.76 By MS/MS By MS/MS 5.6 0.8 3 1 1 3 2 10145000 8867200 1277500 235 672 239 594;595;596;597;598 415;416;417;418 416 4 216570 3780000 AASIYSSWAEEQR VSQDLLDLMHTLHTRAASIYSSWAEEQRHL TRAASIYSSWAEEQRHLETGGQKIEADSRT R A A Q R H 3 1 0 0 0 1 2 0 0 1 0 0 0 0 0 3 0 1 1 0 0 0 13 0 1496.6896 Q92538 Q92538 1509 1521 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 6.8292E-12 206.36 By MS/MS 2.5 0.5 1 1 2 830550 830550 0 236 2055 240 599;600 419 419 1 32291 0 AASLEAVSYAIDTLK VSEASIIIAVSSAHRAASLEAVSYAIDTLK AASLEAVSYAIDTLKAKVPIWKKEIYEESS R A A L K A 4 0 0 1 0 0 1 0 0 1 2 1 0 0 0 2 1 0 1 1 0 0 15 0 1550.8192 O96007 O96007 145 159 MOCS2 Molybdopterin synthase catalytic subunit yes yes 2 0.004264 107.09 By MS/MS 9 0 1 1 50149 50149 0 237 419 241 601 420 420 1 28781 0 AASLEYDYETIR GGPTLQCPPPSSPEKAASLEYDYETIRNID PEKAASLEYDYETIRNIDCYSTDFCVRVRD K A A I R N 2 1 0 1 0 0 2 0 0 1 1 0 0 0 0 1 1 0 2 0 0 0 12 0 1429.6725 Q96N66 Q96N66 289 300 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 2 1.72E-16 219.72 By MS/MS 2 0.816 1 1 1 3 683480 683480 0 238 2229 242 602;603;604 421 421 1 30113 0 AASLPGPGSR ______________________________ ______________________________ M A A S R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 0 0 0 10 0 911.48248 Q8TF76 Q8TF76 2 11 GSG2 Serine/threonine-protein kinase haspin yes yes 2 0.0042104 98.458 By MS/MS 1.5 0.5 1 1 2 177090 177090 0 239 2009 243 605;606 422 422 1 8773 0 AASLTEDR ERSRERPSQPEGLRKAASLTEDRDRGRDAV QPEGLRKAASLTEDRDRGRDAVKREAALPP K A A D R D 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 8 0 861.41921 Q04637 Q04637 1207 1214 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0092543 124.98 By MS/MS 2 0 1 1 0 0 0 240 1264 244 607 423 423 1 0 0 AASLTEDRDR ERSRERPSQPEGLRKAASLTEDRDRGRDAV EGLRKAASLTEDRDRGRDAVKREAALPPVS K A A D R G 2 2 0 2 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 1 1132.5473 Q04637 Q04637 1207 1216 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0049899 137.9 By MS/MS By matching 3.43 1.5 3 1 1 1 1 6 1 10696000 10680000 16033 241 1264 245 608;609;610;611;612;613;614 424;425 424 2 448280 13498 AASLVGKK ______________________________ ______________________________ M A A K K I 2 0 0 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 0 0 8 1 772.48069 Q9BY32 Q9BY32 2 9 ITPA Inosine triphosphate pyrophosphatase yes yes 2 0.0090531 148.33 By MS/MS 8.5 1.12 1 1 1 1 4 5234900 5234900 0 242 2406 246 615;616;617;618 426;427 426 1 2666600 0 AASQAVEEMR ______________________________ ______________________________ M A A M R S 3 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 10 0 1090.5077 O15160 O15160 2 11 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.0042329 96.143 By MS/MS 7 0 1 1 941640 941640 0 243 155 247 619 428 428 96 1 16827 0 AASQDHVR KQRGTRREEQKELQRAASQDHVRGFLEKES EQKELQRAASQDHVRGFLEKESAIVSRPLN R A A V R G 2 1 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 8 0 882.43078 Q9Y314 Q9Y314 105 112 NOSIP Nitric oxide synthase-interacting protein yes yes 2 0.048699 91.853 By MS/MS 8 0 1 1 129180 129180 0 244 2911 248 620 429 429 1 8521.8 0 AASQGYTVAR GENETYPRALLHWNRAASQGYTVARIKLGD LHWNRAASQGYTVARIKLGDYHFYGFGTDV R A A A R I 3 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 10 0 1022.5145 Q9UBV2 Q9UBV2 621 630 SEL1L Protein sel-1 homolog 1 yes yes 2 2.3134E-10 196.52 By MS/MS By matching 4 0 2 1 1 1738300 1721100 17213 245 2758 249 621;622 430 430 1 46983 35968 AASQPTSLAPEK GLGLALGGGSPSRRKAASQPTSLAPEKLRE RRKAASQPTSLAPEKLREE___________ K A A E K L 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1198.6194 Q96N66 Q96N66 457 468 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 2 0.00048425 139.31 By MS/MS 1.5 0.5 1 1 2 495320 495320 0 246 2229 250 623;624 431 431 1 24318 0 AASQVLGEK ______________________________ ______________________________ M A A E K I 2 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 901.4869 Q9Y5Z9 Q9Y5Z9 2 10 UBIAD1 UbiA prenyltransferase domain-containing protein 1 yes yes 2 0.0020026 114.97 By MS/MS 1 0 1 1 242160 242160 0 247 2990 251 625 432 432 1 11831 0 AASSAAQGAFQGN EEFSQGIFSSRTFHRAASSAAQGAFQGN__ HRAASSAAQGAFQGN_______________ R A A G N - 5 0 1 0 0 2 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 13 0 1178.5316 O15127 O15127 317 329 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 0.0017682 121.9 By MS/MS By matching 7.33 0.471 2 1 2 1 3188700 3165500 23188 248 151 252 626;627;628 433 433 1 74659 95190 AASSSSPGSPVASSPSR SELGACDFEKPESPRAASSSSPGSPVASSP SSSSPGSPVASSPSRLSPTPDGPPPLAQPP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 2.57E-18 198.37 By MS/MS 2 0.816 1 1 1 3 1757500 1757500 0 249 2055 253 629;630;631 434;435 434 2 79450 0 AASTAPSSTSTPAASSAGLIYIDPSNLR PRSMQWAVRNTQHQRAASTAPSSTSTPAAS ASSAGLIYIDPSNLRRSGTISTSAAAAAAA R A A L R R 6 1 1 1 0 0 0 1 0 2 2 0 0 0 3 7 3 0 1 0 0 0 28 0 2705.3508 O95071 O95071 1726 1753 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2;3 0.00024625 53.55 By MS/MS 2.33 0.471 2 1 3 744610 744610 0 250 364 254 632;633;634 436;437 436 2 33729 0 AASVLNTVLR ______________________________ ______________________________ M A A L R R 2 1 1 0 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 10 0 1042.6135 Q9Y676 Q9Y676 2 11 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 0.00029167 133.13 By MS/MS 8 0 1 1 108640 108640 0 251 2995 255 635 438 438 1 7167.1 0 AASVSSLHER VGMSPSSSLSALSSRAASVSSLHERILFAP ALSSRAASVSSLHERILFAPGSEEAIERLK R A A E R I 2 1 0 0 0 0 1 0 1 0 1 0 0 0 0 3 0 0 0 1 0 0 10 0 1055.536 Q12756 Q12756 414 423 KIF1A Kinesin-like protein KIF1A yes yes 2 0.018921 93.111 By MS/MS 2 0 1 1 186870 186870 0 252 1302 256 636 439 439 1 9288.5 0 AATAAADFTAK KGAVWGATLNKDATKAATAAADFTAKVWDA DATKAATAAADFTAKVWDAVSGDELMTLAH K A A A K V 6 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 11 0 1036.5189 Q9Y3F4 Q9Y3F4 74 84 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 4.7172E-07 188.87 By MS/MS 7.5 0.5 1 1 2 1646400 1646400 0 253 2937 257 637;638 440;441 440 2 108610 0 AATALKDVVK PWCGHCQRLTPEWKKAATALKDVVKVGAVD PEWKKAATALKDVVKVGAVDADKHHSLGGQ K A A V K V 3 0 0 1 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 10 1 1014.6073 Q15084 Q15084 68 77 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.0047382 139.43 By MS/MS By matching 6.33 0.471 2 1 2 1 7728600 7700700 27928 254 1478 258 639;640;641 442 442 1 63282 85654 AATALLEAGLAR ______________________________ ______________________________ M A A A R V 5 1 0 0 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 12 0 1155.6612 Q8WUK0 Q8WUK0 2 13 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 6.3333E-11 201.33 By MS/MS 9.33 0.471 2 1 3 9444800 9444800 0 255 2017 259;260 642;643;644 443;444;445;446 443 4 5430400 0 AATAREDGASGQER ______________________________ MAATAREDGASGQERGQRGCEHYDRGCLLK M A A E R G 4 2 0 1 0 1 2 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 14 1 1417.6546 Q96PM5 Q96PM5 2 15 RCHY1 RING finger and CHY zinc finger domain-containing protein 1 yes yes 2 0.00010673 155.99 By MS/MS 8.5 0.5 1 1 2 210310 210310 0 256 2239 261 645;646 447 447 1 59893 0 AATASAGAGGIDGK ______________________________ MAATASAGAGGIDGKPRTSPKSVKFLFGGL M A A G K P 5 0 0 1 0 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 14 0 1145.5677 Q02978 Q02978 2 15 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 2.0616E-12 244.71 By MS/MS 4.5 3.5 1 1 2 2794700 2794700 0 257 1260 262 647;648 448;449 449 2 182690 0 AATASAGAGGIDGKPR ______________________________ ATASAGAGGIDGKPRTSPKSVKFLFGGLAG M A A P R T 5 1 0 1 0 0 0 4 0 1 0 1 0 0 1 1 1 0 0 0 0 0 16 1 1398.7215 Q02978 Q02978 2 17 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 5.0428E-30 251.75 By MS/MS By MS/MS 5.43 3.05 3 2 2 2 2 1 1 4 2 2 19 2 384090000 383900000 194290 258 1260 263 649;650;651;652;653;654;655;656;657;658;659;660;661;662;663;664;665;666;667;668;669 450;451;452;453;454;455;456;457;458;459;460;461;462;463;464;465;466;467;468;469;470 467 21 30426000 1375900 AATFFGEVVK ______________________________ ______________________________ M A A V K A 2 0 0 0 0 0 1 1 0 0 0 1 0 2 0 0 1 0 0 2 0 0 10 0 1067.5651 O95456 O95456 2 11 PSMG1 Proteasome assembly chaperone 1 yes yes 2 0.00030536 131.44 By MS/MS 8 0 1 1 1235100 1235100 0 259 394 264 670 471 471 1 81478 0 AATFFGEVVKAPCR ______________________________ MAATFFGEVVKAPCRAGTEDEEEEEEGRRE M A A C R A 3 1 0 0 1 0 1 1 0 0 0 1 0 2 1 0 1 0 0 2 0 0 14 1 1551.7868 O95456 O95456 2 15 PSMG1 Proteasome assembly chaperone 1 yes yes 2 0.0024738 125.72 By MS/MS 8 0 1 1 435180 435180 0 260 394 265 671 472 472 1 28709 0 AATGEEVSAEDLGGADLHCR RKQGTIFLAGPPLVKAATGEEVSAEDLGGA EVSAEDLGGADLHCRKSGVSDHWALDDHHA K A A C R K 4 1 0 2 1 0 3 3 1 0 2 0 0 0 0 1 1 0 0 1 0 0 20 0 2056.912 Q9HCC0 Q9HCC0 249 268 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2;3 4.5831E-50 322.18 By MS/MS 6 0 2 2 15248000 15248000 0 261 2559 266 672;673 473;474 473 2 118910 0 AATIIEER SQVHMMAAAVADGTRAATIIEERSPSWISA AVADGTRAATIIEERSPSWISASVTEPLEQ R A A E R S 2 1 0 0 0 0 2 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 8 0 901.4869 Q02952 Q02952 902 909 AKAP12 A-kinase anchor protein 12 yes yes 2 0.038799 95.741 By MS/MS 1 0 1 1 176470 176470 0 262 1259 267 674 475 475 1 8622.2 0 AATLAER AAAAAPGTAEKLSPKAATLAERSAGLAFSL TAEKLSPKAATLAERSAGLAFSLYQAMAKD K A A E R S 3 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 730.39735 P50454 P50454 40 46 SERPINH1 Serpin H1 yes yes 2 0.031543 113.89 By MS/MS 6.5 0.5 1 1 2 6039800 6039800 0 263 947 268 675;676 476;477 477 2 75251 0 AATLAQELEK QVKKYHRLKEEASKRAATLAQELEKFNRDQ EASKRAATLAQELEKFNRDQKADQDRLDLE R A A E K F 3 0 0 0 0 1 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1072.5764 Q14683 Q14683 386 395 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00047654 145.89 By MS/MS 2.5 0.5 1 1 2 2984200 2984200 0 264 1440 269 677;678 478 478 1 79856 0 AATLILEPAGR ______________________________ ______________________________ M A A G R C 3 1 0 0 0 0 1 1 0 1 2 0 0 0 1 0 1 0 0 0 0 0 11 0 1110.6397 Q86TX2 Q86TX2 2 12 ACOT1 Acyl-coenzyme A thioesterase 1 yes yes 2 0.0051379 107.15 By MS/MS 6.5 0.5 1 1 2 1400100 1400100 0 265 1817 270 679;680 479 479 1 19680 0 AATMSAVEAATCR TTIYGLHALEQGGLRAATMSAVEAATCRAK LRAATMSAVEAATCRAKELSRK________ R A A C R A 5 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 2 0 0 1 0 0 13 0 1337.6068 Q53H96 Q53H96 255 267 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 2 0.00019839 143.79 By MS/MS 8 0 1 1 246690 246690 0 266 1588 271 681 480 480 1190 1 16274 0 AATPQVAAELEK LRTQWDLTNIQDAIRAATPQVAAELEKSLS AIRAATPQVAAELEKSLSPGLDTKQLPSPG R A A E K S 4 0 0 0 0 1 2 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1226.6507 O95900 O95900 285 296 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 0.0028669 116.74 By MS/MS 7.5 0.5 1 1 2 4630700 4630700 0 267 414 272 682;683 481 481 1 150930 0 AATSPALFNR VVFTMNPSSEGLKDRAATSPALFNRCVLNW GLKDRAATSPALFNRCVLNWFGDWSTEALY R A A N R C 3 1 1 0 0 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 10 0 1046.5509 Q14204 Q14204 3079 3088 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00036221 150.36 By MS/MS By matching 1.33 0.471 2 1 2 1 3262300 3229900 32387 268 1421 273 684;685;686 482 482 1 158340 32387 AATTGSGVKVPR ______________________________ ______________________________ M A A P R N 2 1 0 0 0 0 0 2 0 0 0 1 0 0 1 1 2 0 0 2 0 0 12 1 1142.6408 Q13404 Q13404 2 13 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 2 0.0046598 127.42 By MS/MS 10 0 1 1 735800 735800 0 269 1363 274 687 483 483 1 782080 0 AAVAATAAAK ______________________________ ______________________________ M A A A K G 7 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 10 0 843.48142 Q6Y1H2 Q6Y1H2 2 11 HACD2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 2 0.003207 150.36 By MS/MS 2 0.816 1 1 1 3 228680 228680 0 270 1735 275 688;689;690 484;485 484 2 10042 0 AAVDAGFVPNDMQVGQTGK YDLADQLHAAVGASRAAVDAGFVPNDMQVG AGFVPNDMQVGQTGKIVAPELYIAVGISGA R A A G K I 3 0 1 2 0 2 0 3 0 0 0 1 1 1 1 0 1 0 0 3 0 0 19 0 1903.9098 P13804 P13804 250 268 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 5.6495E-05 127.07 By MS/MS By matching 8 0 3 2 1 4434300 4401300 32965 271 582 276;277 691;692;693 486;487 486 374 2 290350 281230 AAVDGLSK ESRQDDILKRLYELKAAVDGLSKMIQTPDA KRLYELKAAVDGLSKMIQTPDADLDVTNII K A A S K M 2 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 8 0 759.41267 Q13155 Q13155 71 78 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 0.039336 95.531 By MS/MS 6.5 0.5 1 1 2 2395300 2395300 0 272 1342 278 694;695 488 488 1 39830 0 AAVDLEKLR ______________________________ ______________________________ M A A L R A 2 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 1 1013.5869 P17858 P17858 2 10 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 2 0.0048509 132.76 By MS/MS By matching 4.57 2.77 1 1 1 2 1 1 6 1 8026100 8013800 12297 273 617 279 696;697;698;699;700;701;702 489;490;491 490 2 509040 36386 AAVDSFYLLYR ______________________________ ______________________________ M A A Y R E 2 1 0 1 0 0 0 0 0 0 2 0 0 1 0 1 0 0 2 1 0 0 11 0 1316.6765 Q3SXM5 Q3SXM5 2 12 HSDL1 Inactive hydroxysteroid dehydrogenase-like protein 1 yes yes 2 0.009741 83.948 By MS/MS 7 0 1 1 71961 71961 0 274 1569 280 703 492 492 1 1286 0 AAVEDPRVLLLDL LIDGREAVTFLRKIKAAVEDPRVLLLDL__ IKAAVEDPRVLLLDL_______________ K A A D L - 2 1 0 2 0 0 1 0 0 0 4 0 0 0 1 0 0 0 0 2 0 0 13 1 1422.8082 P36957 P36957 441 453 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.0032635 138.25 By MS/MS 6.5 0.5 1 1 2 923260 923260 0 275 812 281 704;705 493 493 1 7605.2 0 AAVEDSGTTVETIK RAAGEPGTSMPPEKKAAVEDSGTTVETIKL KAAVEDSGTTVETIKLGGVSSTEELDIRTL K A A I K L 2 0 0 1 0 0 2 1 0 1 0 1 0 0 0 1 3 0 0 2 0 0 14 0 1419.7093 Q5VTR2 Q5VTR2 23 36 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 1.5241E-59 303.31 By MS/MS By matching 4 0 2 1 1 1145000 1125500 19442 276 1649 282 706;707 494 494 1 30726 40625 AAVEEGIVLGGGCALLR NEKKDRVTDALNATRAAVEEGIVLGGGCAL VEEGIVLGGGCALLRCIPALDSLTPANEDQ R A A L R C 3 1 0 0 1 0 2 4 0 1 3 0 0 0 0 0 0 0 0 2 0 0 17 0 1683.8978 P10809 P10809 430 446 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 3.0689E-25 226.73 By MS/MS By MS/MS 6.25 1.92 1 1 2 4 1 1 1 1 11 1 438010000 437890000 113410 277 544 283 708;709;710;711;712;713;714;715;716;717;718;719 495;496;497;498;499;500;501;502;503;504;505 499 11 3921400 347830 AAVELEEPEDAR RKALEHVPNSVRLWKAAVELEEPEDARIML LWKAAVELEEPEDARIMLSRAVECCPTSVE K A A A R I 3 1 0 1 0 0 4 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 12 0 1327.6256 O94906 O94906 409 420 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 2.202E-16 215.93 By MS/MS By matching 4 0 2 1 1 3358000 3304500 53522 278 358 284 720;721 506 506 1 90209 111840 AAVENLPTFLVELSR PDRLELEAAQKFLERAAVENLPTFLVELSR AAVENLPTFLVELSRVLANPGNSQVARVAA R A A S R V 2 1 1 0 0 0 2 0 0 0 3 0 0 1 1 1 1 0 0 2 0 0 15 0 1657.9039 Q14974 Q14974 28 42 KPNB1 Importin subunit beta-1 yes yes 2 2.7787E-07 167.73 By MS/MS 5 1 1 1 2 739940 739940 0 279 1452 285 722;723 507;508;509 509 3 9798.4 0 AAVETLGVPCFLGGMAR GSQALLTPTSADKLRAAVETLGVPCFLGGM VETLGVPCFLGGMARGLLGRNHPLHIRENR R A A A R G 3 1 0 0 1 0 1 3 0 0 2 0 1 1 1 0 1 0 0 2 0 0 17 0 1747.8749 A1L0T0 A1L0T0 306 322 ILVBL Acetolactate synthase-like protein yes yes 2 0.00012539 132.17 By MS/MS 3.6 2.06 1 1 1 2 5 3959200 3959200 0 280 8 286;287 724;725;726;727;728 510;511;512 511 0 3 37291 0 AAVGQESPGGLEAGNAK KNDDLNKPINKGRKRAAVGQESPGGLEAGN VGQESPGGLEAGNAKAPKLQDLAKKAAPAE R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 7.0009E-14 187.63 By MS/MS 3 0 1 1 669720 669720 0 281 1556 288 729 513 513 1 17483 0 AAVIIMAVEK HSLINLPANSTIKKKAAVIIMAVEKQTLMQ TIKKKAAVIIMAVEKQTLMQHILRCDYEAC K A A E K Q 3 0 0 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 0 2 0 0 10 0 1043.6049 O95071 O95071 864 873 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.018148 93.649 By MS/MS 2 0.816 1 1 1 3 531270 531270 0 282 364 289 730;731;732 514 514 1 22563 0 AAVLLEQER DHSLKEHELLEQQKRAAVLLEQERQQEIAK LEQQKRAAVLLEQERQQEIAKMGTPVPRPP R A A E R Q 2 1 0 0 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1027.5662 Q13435 Q13435 184 192 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.0072216 110.87 By MS/MS 3 0 1 1 3149400 3149400 0 283 1369 290 733 515 515 1 82216 0 AAVLNAER ______________________________ ______________________________ M A A E R L 3 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 842.46102 Q9H3P7 Q9H3P7 2 9 ACBD3 Golgi resident protein GCP60 yes yes 2 0.0081672 104.44 By MS/MS 5 0 1 1 357150 357150 0 284 2491 291 734 516 516 1 14680 0 AAVPELLQQQEEDRSK ______________________________ AVPELLQQQEEDRSKLRSVSVDLNVDPSLQ M A A S K L 2 1 0 1 0 3 3 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 16 1 1839.9327 Q9Y5X3 Q9Y5X3 2 17 SNX5 Sorting nexin-5 yes yes 2 4.8067E-06 155.08 By MS/MS 6.5 0.5 1 1 2 4302900 4302900 0 285 2985 292 735;736 517;518 518 2 56328 0 AAVPLGGFLCNVADK TESEPGQQPMELENKAAVPLGGFLCNVADK AAVPLGGFLCNVADKSGAMEMAGLCPAACM K A A D K S 3 0 1 1 1 0 0 2 0 0 2 1 0 1 1 0 0 0 0 2 0 0 15 0 1530.7864 Q7L8L6 Q7L8L6 661 675 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2;3 9.7493E-10 180.2 By MS/MS 5 0 2 2 4262900 4262900 0 286 1770 293 737;738 519;520 519 2 175220 0 AAVPSGASTGIYEALELR PTVEVDLFTSKGLFRAAVPSGASTGIYEAL PSGASTGIYEALELRDNDKTRYMGKGVSKA R A A L R D 4 1 0 0 0 0 2 2 0 1 2 0 0 0 1 2 1 0 1 1 0 0 18 0 1803.9367 P06733;P13929;P09104 P06733 33 50 ENO1;ENO3;ENO2 Alpha-enolase;Beta-enolase;Gamma-enolase yes no 2 1.9085E-07 177.38 By MS/MS 6 0 1 1 10510000 10510000 0 287 482 294 739 521 521 1 81958 0 AAVQAAEVKVDGSEPK ______________________________ AVQAAEVKVDGSEPKLSKNELKRRLKAEKK M A A P K L 4 0 0 1 0 1 2 1 0 0 0 2 0 0 1 1 0 0 0 3 0 0 16 1 1597.8312 Q15046 Q15046 2 17 KARS Lysine--tRNA ligase yes yes 2 5.9916E-07 161.76 By MS/MS 5 0 1 1 9279200 9279200 0 288 1471 295 740 522 522 1 381410 0 AAVQELSSSILAGEDPEER RDSHLGPHRSTPESRAAVQELSSSILAGED ELSSSILAGEDPEERGVKLGLGDFIFYSVL R A A E R G 3 1 0 1 0 1 4 1 0 1 2 0 0 0 1 3 0 0 0 1 0 0 19 0 1999.9698 P49768 P49768 359 377 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 yes yes 2;3 2.651E-08 188.9 By MS/MS 9.33 0.471 2 1 3 3302700 3302700 0 289 931 296 741;742;743 523;524 523 2 1923500 0 AAVQMDPELAKR ______________________________ ______________________________ M A A K R L 3 1 0 1 0 1 1 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 12 1 1327.6918 Q9Y312 Q9Y312 2 13 AAR2 Protein AAR2 homolog yes yes 2 0.00099777 99.53 By MS/MS 7 0 2 2 3159300 3159300 0 290 2910 297;298 744;745 525;526 526 1676 2 56457 0 AAVQVLDDIEK VGVSNVFGPGTRIPKAAVQVLDDIEKCLEK RIPKAAVQVLDDIEKCLEKKQQSV______ K A A E K C 2 0 0 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1199.6398 P22033 P22033 731 741 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 4.3148E-07 187.99 By MS/MS 3.5 1.5 1 1 2 5215800 5215800 0 291 653 299 746;747 527;528 528 2 219420 0 AAVSAFPTDSLER RRPQSRSQSFFAAARAAVSAFPTDSLERDL ARAAVSAFPTDSLERDLSPSSAPAVASAAE R A A E R D 3 1 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 13 0 1362.6779 O14654 O14654 1098 1110 IRS4 Insulin receptor substrate 4 yes yes 2 0.00023083 147.3 By MS/MS 3 1.29 1 1 2 1 1 6 5200100 5200100 0 292 118 300 748;749;750;751;752;753 529;530;531;532;533 531 5 160970 0 AAVSTNCR ANLGLLFGLSESDAKAAVSTNCRAALLHGE LSESDAKAAVSTNCRAALLHGETRKTAFGI K A A C R A 2 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 8 0 877.4076 P78346 P78346 219 226 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.052476 90.37 By MS/MS 8 0 1 1 302220 302220 0 293 1193 301 754 534 534 1 19938 0 AAVSVSTDNIK AFIELSQVDVTFTTKAAVSVSTDNIKYVSA FTTKAAVSVSTDNIKYVSAESVVPSTQAVT K A A I K Y 2 0 1 1 0 0 0 0 0 1 0 1 0 0 0 2 1 0 0 2 0 0 11 0 1103.5823 Q9UKA4 Q9UKA4 716 726 AKAP11 A-kinase anchor protein 11 yes yes 2 0.001956 122.96 By MS/MS 2 0 1 1 369750 369750 0 294 2809 302 755 535 535 1 18379 0 AAVVAKR ______________________________ ______________________________ M A A K R E 3 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 7 1 713.45481 Q9BV81 Q9BV81 2 8 EMC6 ER membrane protein complex subunit 6 yes yes 2 0.043823 138.53 By MS/MS By matching 10 0 2 1 1 2239000 2216600 22321 295 2373 303 756;757 536 536 1 2356000 572510 AAVVENVVK ______________________________ ______________________________ M A A V K L 2 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 9 0 927.53893 Q92785 Q92785 2 10 DPF2 Zinc finger protein ubi-d4 yes yes 2 0.0040136 116.05 By MS/MS 7 0 1 1 1315100 1315100 0 296 2079 304 758 537 537 1 23502 0 AAVVPLGTWR VTGVLVVTTWLLSGRAAVVPLGTWRRLSLC LLSGRAAVVPLGTWRRLSLCWFAVCGFIHL R A A W R R 2 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 1 0 2 0 0 10 0 1068.608 Q15125 Q15125 53 62 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 2 0.0096956 83.783 By MS/MS 9 0 1 1 1438400 1438400 0 297 1482 305 759 538 538 1 825520 0 AAVWQQVLAVDAR ______________________________ ______________________________ M A A A R Y 4 1 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 3 0 0 13 0 1425.7728 Q9H1Z4 Q9H1Z4 2 14 WDR13 WD repeat-containing protein 13 yes yes 2 0.0043256 93.258 By MS/MS 6 0 1 1 370150 370150 0 298 2469 306 760 539 539 1 2886.4 0 AAWEVDSGRR EMAMKVELARMSYQRAAWEVDSGRRNTYYA MSYQRAAWEVDSGRRNTYYASIAKAFAGDI R A A R R N 2 2 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 1 0 0 10 1 1145.5578 P11310 P11310 340 349 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.011947 113.71 By MS/MS 7 0 1 1 5530900 5530900 0 299 552 307 761 540 540 1 98838 0 AAYAGGLVLDPK EIDGDTNKYKKGRKKAAYAGGLVLDPKVGF RKKAAYAGGLVLDPKVGFYDKFILLLDFNS K A A P K V 3 0 0 1 0 0 0 2 0 0 2 1 0 0 1 0 0 0 1 1 0 0 12 0 1173.6394 P09884 P09884 837 848 POLA1 DNA polymerase alpha catalytic subunit yes yes 2 0.0040121 111.06 By MS/MS 2 0.816 1 1 1 3 362650 362650 0 300 522 308 762;763;764 541 541 1 12923 0 AAYFGIYDTAK YQGFNVSVQGIIIYRAAYFGIYDTAKGMLP IIYRAAYFGIYDTAKGMLPDPKNTHIVISW R A A A K G 3 0 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 0 2 0 0 0 11 0 1218.5921 P05141 P05141 189 199 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.0012862 140.45 By MS/MS By matching 5.8 2.9 2 1 1 1 1 2 1 3 2 1 14 1 497580000 495890000 1691700 301 469 309 765;766;767;768;769;770;771;772;773;774;775;776;777;778;779 542;543;544;545;546;547;548;549;550;551;552;553;554;555 547 14 44310000 14432000 AAYFGVYDTAK YQGFSVSVQGIIIYRAAYFGVYDTAKGMLP IIYRAAYFGVYDTAKGMLPDPKNTHIVVSW R A A A K G 3 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 2 1 0 0 11 0 1204.5764 P12235;P12236 P12236 189 199 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0010385 133.13 By MS/MS By MS/MS 5.73 2.83 1 1 1 1 1 1 1 2 1 1 10 1 172040000 171590000 447290 302 563;562 310 780;781;782;783;784;785;786;787;788;789;790 556;557;558;559;560;561;562;563;564;565;566 564 11 13667000 3815900 AAYLQWR ______________________________ ______________________________ M A A W R R 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 7 0 906.47119 Q9H270 Q9H270 2 8 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 0.019405 100.82 By MS/MS 4 0 1 1 126210 126210 0 303 2473 311 791 567 567 1 3445.4 0 AAYLSDPR TLKDLLLNTMSQEEKAAYLSDPRAPPCEYK TMSQEEKAAYLSDPRAPPCEYKDWLTKMSG K A A P R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 891.44503 P78527 P78527 3826 3833 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.036889 96.492 By MS/MS 3 1.41 1 1 1 1 1 5 4200900 4200900 0 304 1197 312 792;793;794;795;796 568 568 1 158350 0 AAYNPGQAVPWNAVK VKGRLPQLGEKVLVKAAYNPGQAVPWNAVK AAYNPGQAVPWNAVKVQTLSNQPLLKSPAP K A A V K V 4 0 2 0 0 1 0 1 0 0 0 1 0 0 2 0 0 1 1 2 0 0 15 0 1584.8049 Q8N163 Q8N163 98 112 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 1.3614E-14 208.15 By MS/MS 3 0 1 1 1879100 1879100 0 305 1895 313 797 569 569 1 49054 0 AAYPDLENPPLLVTPSQQAK NIISRLQEVFGHAIKAAYPDLENPPLLVTP LENPPLLVTPSQQAKFGDYQCNSAMGISQM K A A A K F 3 0 1 1 0 2 1 0 0 0 3 1 0 0 4 1 1 0 1 1 0 0 20 0 2151.1212 P54136 P54136 90 109 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 0.00087939 120.32 By MS/MS 5 0 2 2 4709200 4709200 0 306 1013 314 798;799 570;571 570 2 193570 0 ACAELHQNVNVK FPDEFHLQTLNPFLRACAELHQNVNVKNII FLRACAELHQNVNVKNIIIALIDRLALFAH R A C V K N 2 0 2 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 2 0 0 12 0 1381.6772 Q96QK1 Q96QK1 285 296 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 5.6149E-05 164.66 By MS/MS 5.5 0.5 1 1 2 1171800 1171800 0 307 2242 315 800;801 572 572 1 25492 0 ACANPAAGSVILLENLR DVLFLKDCVGPEVEKACANPAAGSVILLEN ANPAAGSVILLENLRFHVEEEGKGKDASGN K A C L R F 4 1 2 0 1 0 1 1 0 1 3 0 0 0 1 1 0 0 0 1 0 0 17 0 1767.9302 P00558 P00558 107 123 PGK1 Phosphoglycerate kinase 1 yes yes 2;3 8.6906E-14 234.83 By MS/MS 7.33 0.471 2 1 3 1169300 1169300 0 308 432 316 802;803;804 573;574 573 2 23556 0 ACARPLISVYSEK ______________________________ ______________________________ M A C E K G 2 1 0 0 1 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 0 0 13 1 1492.7708 P36578 P36578 2 14 RPL4 60S ribosomal protein L4 yes yes 2 0.050457 84.687 By MS/MS 6 0 1 1 60025 0 60025 309 808 317 805 575 575 1 0 184090 ACELFLR RRAVSQLIRLGQCTKACELFLRNRAAAVHT IRLGQCTKACELFLRNRAAAVHTAIRQLRI K A C L R N 1 1 0 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 907.45857 Q8IYI6 Q8IYI6 427 433 EXOC8 Exocyst complex component 8 yes yes 2 0.030339 114.72 By MS/MS 5 0 1 1 772820 772820 0 310 1881 318 806 576 576 1 31766 0 ACFGTFLPEEK LLQQANENRQNSTGKACFGTFLPEEKLNDF STGKACFGTFLPEEKLNDFRDEQIGQLQEL K A C E K L 1 0 0 0 1 0 2 1 0 0 1 1 0 2 1 0 1 0 0 0 0 0 11 0 1297.6013 Q9NRP4 Q9NRP4 79 89 SDHAF3 Succinate dehydrogenase assembly factor 3, mitochondrial yes yes 2 1.0153E-06 177.7 By MS/MS 10 0 1 1 248170 248170 0 311 2610 319 807 577 577 1 263780 0 ACFLGATVK LASQNFSYGVTEMYKACFLGATVKYLQKFI VTEMYKACFLGATVKYLQKFIPEITISDIL K A C V K Y 2 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 9 0 965.50044 Q9H9P8 Q9H9P8 375 383 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.0059227 113.71 By MS/MS 7 0 1 1 3503300 3503300 0 312 2536 320 808 578 578 1 62606 0 ACGDSTLTQITAGLDPVGR QEAEQLRNQIRDARKACGDSTLTQITAGLD STLTQITAGLDPVGRIQMRTRRTLRGHLAK K A C G R I 2 1 0 2 1 1 0 3 0 1 2 0 0 0 1 1 3 0 0 1 0 0 19 0 1930.9418 P62879 P62879 24 42 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes yes 2 4.7122E-44 253.06 By MS/MS 8 0 1 1 506260 506260 0 313 1156 321 809 579 579 1 33398 0 ACGNFGIPCELR MGSTSDLGHCEKIKKACGNFGIPCELRVTS IKKACGNFGIPCELRVTSAHKGPDETLRIK K A C L R V 1 1 1 0 2 0 1 2 0 1 1 0 0 1 1 0 0 0 0 0 0 0 12 0 1392.6278 P22234 P22234 287 298 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.0013022 129.88 By MS/MS 7 0 1 1 8050100 8050100 0 314 656 322 810 580 580 1 143860 0 ACLDTAVENMPSLK EDPLLSGLLDSPALKACLDTAVENMPSLKM KACLDTAVENMPSLKMKVVEVLAGHGHLYS K A C L K M 2 0 1 1 1 0 1 0 0 0 2 1 1 0 1 1 1 0 0 1 0 0 14 0 1547.7324 P49327 P49327 1226 1239 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.1318E-59 294.49 By MS/MS 2 0.756 2 3 2 7 9389000 9389000 0 315 915 323;324 811;812;813;814;815;816;817 581;582;583;584;585;586;587;588 585 652 8 419820 0 ACLLETPIR ______________________________ ______________________________ M A C I R M 1 1 0 0 1 0 1 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 9 0 1071.5747 Q8IUR7 Q8IUR7 2 10 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.00034528 143.89 By MS/MS 6 1 1 1 2 1007600 1007600 0 316 1854 325 818;819 589;590 589 2 29468 0 ACPRPEGLNFQDLK NGLTVAQNQVLNLIKACPRPEGLNFQDLKN KACPRPEGLNFQDLKNQLKHMSVSSIKQAV K A C L K N 1 1 1 1 1 1 1 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 14 1 1643.809 P15927 P15927 218 231 RPA2 Replication protein A 32 kDa subunit yes yes 2;3 0.026264 110.15 By MS/MS 8 0 2 2 8738900 8738900 0 317 604 326 820;821 591;592 592 2 576500 0 ACQIFVR SFGGAGGHAPGVARKACQIFVRNLPFDFTW HAPGVARKACQIFVRNLPFDFTWKMLKDKF K A C V R N 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 892.45891 P52272 P52272 652 658 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.014337 141.98 By MS/MS 5 0 1 1 2193000 2193000 0 318 982 327 822 593 593 1 90143 0 ACSLLGK QEEDVVLLTAGEHNKACSLLGKLRLECADL LTAGEHNKACSLLGKLRLECADLLETRGVV K A C G K L 1 0 0 0 1 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 747.39491 Q6PI48 Q6PI48 448 454 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.023342 119.56 By MS/MS 5.5 0.5 1 1 2 5676100 5676100 0 319 1715 328 823;824 594 594 1 215870 0 ACTDAAYSLLR AAAAMRLGAECARYRACTDAAYSLLRELQA ARYRACTDAAYSLLRELQAEPGLPGAAARK R A C L R E 3 1 0 1 1 0 0 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 11 0 1239.5918 Q2M1P5 Q2M1P5 414 424 KIF7 Kinesin-like protein KIF7 yes yes 2 0.0020123 120.27 By MS/MS 3 0 1 1 429790 429790 0 320 1558 329 825 595 595 1 11220 0 ACTILLR GDEYFTFITDCKDPKACTILLRGASKEILS ITDCKDPKACTILLRGASKEILSEVERNLQ K A C L R G 1 1 0 0 1 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 7 0 845.47931 P49368 P49368 371 377 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.0099715 154.09 By MS/MS By matching 7.25 1.56 1 2 2 1 1 1 7 1 146200000 146120000 77061 321 916 330 826;827;828;829;830;831;832;833 596;597;598;599;600;601 597 6 2490400 236340 ACVVHGSDLK RLNIPVSQVNPRDAKACVVHGSDLKDMTSE PRDAKACVVHGSDLKDMTSEQLDDILKYHT K A C L K D 1 0 0 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 2 0 0 10 0 1084.5335 P05023;P50993 P05023 662 671 ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 2;3 0.00049521 145.16 By MS/MS 2.57 1.4 2 2 1 1 1 7 9231700 9231700 0 322 463 331 834;835;836;837;838;839;840 602;603;604;605 605 4 376600 0 ACYALENFVENLGPK YLKSVPLGHTHHLAKACYALENFVENLGPK ACYALENFVENLGPKVQPYLPELMECMLQL K A C P K V 2 0 2 0 1 0 2 1 0 0 2 1 0 1 1 0 0 0 1 1 0 0 15 0 1723.824 Q8TEX9 Q8TEX9 458 472 IPO4 Importin-4 yes yes 2 0.00014765 135.02 By MS/MS 4 0 1 1 123450 123450 0 323 2005 332 841 606 606 1 3369.9 0 ACYGVLR ESLRYKLLGGLAVRRACYGVLRFIMESGAK LGGLAVRRACYGVLRFIMESGAKGCEVVVS R A C L R F 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 0 837.41671 P23396 P23396 118 124 RPS3 40S ribosomal protein S3 yes yes 2 0.037342 109.88 By MS/MS 8.5 0.5 1 1 2 4505000 4505000 0 324 668 333 842;843 607 607 1 318900 0 ACYLSINPQKDETLETEK HSSSEFEIVKAIKERACYLSINPQKDETLE LSINPQKDETLETEKAQYYLPDGSTIEIGP R A C E K A 1 0 1 1 1 1 3 0 0 1 2 2 0 0 1 1 2 0 1 0 0 0 18 1 2138.0201 P61163 P61163 221 238 ACTR1A Alpha-centractin yes yes 3 0.04205 59.606 By MS/MS 7 0 1 1 4260100 4260100 0 325 1090 334 844 608 608 1 76129 0 ADAEGESDLENSR RILAQATSDLVNAIKADAEGESDLENSRKL IKADAEGESDLENSRKLLSAAKILADATAK K A D S R K 2 1 1 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 13 0 1391.5801 Q9Y490 Q9Y490 842 854 TLN1 Talin-1 yes yes 2 9.4849E-35 259.35 By MS/MS 2 0 1 1 569980 569980 0 326 2947 335 845 609 609 1 28331 0 ADALQAGASQFETSAAK KVLERDQKLSELDDRADALQAGASQFETSA ALQAGASQFETSAAKLKRKYWWKNCKMWAI R A D A K L 6 0 0 1 0 2 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 0 17 0 1664.8006 Q15836;P63027 Q15836 50 66 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 yes no 2 5.8809E-98 330.68 By MS/MS 9.5 0.5 1 1 2 2022500 2022500 0 327 1526 336 846;847 610;611 611 2 1952300 0 ADAPDAGAQSDSELPSYHQNDVSLDR GSGVKPPAALQATARADAPDAGAQSDSELP SELPSYHQNDVSLDRGYTSDSEVYTDHGRP R A D D R G 4 1 1 5 0 2 1 1 1 0 2 0 0 0 2 4 0 0 1 1 0 0 26 0 2757.2114 Q92538 Q92538 1289 1314 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.0011057 64.318 By MS/MS 2 0 1 1 198510 198510 0 328 2055 337 848 612;613 613 2 9867 0 ADAVQDSEMVELVELEIR ARQIGVEHVVVYVNKADAVQDSEMVELVEL VQDSEMVELVELEIRELLTEFGYKGEETPV K A D I R E 2 1 0 2 0 1 4 0 0 1 2 0 1 0 0 1 0 0 0 3 0 0 18 0 2044.9987 P49411 P49411 183 200 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.00016648 128.9 By MS/MS 7 0 1 1 61750 61750 0 329 918 338 849 614 614 1 1103.5 0 ADAVWNK YNLLKLYKINGDWQRADAVWNKIQEENVIP KINGDWQRADAVWNKIQEENVIPREKTLRL R A D N K I 2 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 7 0 802.39735 P42704 P42704 974 980 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.011664 149.4 By MS/MS 3.5 0.5 1 1 2 12314000 12314000 0 330 854 339 850;851 615 615 1 322450 0 ADAVWNKIQEENVIPR YNLLKLYKINGDWQRADAVWNKIQEENVIP DAVWNKIQEENVIPREKTLRLLAEILREGN R A D P R E 2 1 2 1 0 1 2 0 0 2 0 1 0 0 1 0 0 1 0 2 0 0 16 1 1880.9745 P42704 P42704 974 989 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 6.7933E-21 231.74 By MS/MS 3.33 0.471 2 1 3 7693300 7693300 0 331 854 340 852;853;854 616;617 617 2 201420 0 ADAWEEIRR ______________________________ ______________________________ M A D R R L 2 2 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 9 1 1144.5625 O94874 O94874 2 10 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0052977 131.06 By MS/MS 7 1.41 1 1 1 1 1 5 16109000 16109000 0 332 354 341 855;856;857;858;859 618 618 1 637610 0 ADCASGIFLAAEK KELLYFLDSCEPEFKADCASGIFLAAEKYA FKADCASGIFLAAEKYAPSKRWHIDTIMRV K A D E K Y 4 0 0 1 1 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 13 0 1351.6442 O43747 O43747 398 410 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.00017777 150.46 By MS/MS 3.5 0.5 1 1 2 947360 947360 0 333 219 342 860;861 619 619 1 25761 0 ADCIKEIDLLK LKKVQIFDLMDAKARADCIKEIDLLKQLNH AKARADCIKEIDLLKQLNHPNVIKYYASFI R A D L K Q 1 0 0 2 1 0 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 11 1 1316.701 Q8TDX7 Q8TDX7 77 87 NEK7 Serine/threonine-protein kinase Nek7 yes yes 3 0.041511 65.842 By MS/MS 8 0 1 1 326710 326710 0 334 2000 343 862 620 620 1 21553 0 ADDDRFPR RGPWRNMDDDRLSRRADDDRFPRRGDDSRP DDRLSRRADDDRFPRRGDDSRPGPWRPLVK R A D P R R 1 2 0 3 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 8 1 990.45191 Q14152 Q14152 1152 1159 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.025364 89.142 By MS/MS 3 0 1 1 566580 566580 0 335 1409 344 863 621 621 1 14791 0 ADDGRPFPQVIK CIGGVILFHETLYQKADDGRPFPQVIKSKG YQKADDGRPFPQVIKSKGGVVGIKVDKGVV K A D I K S 1 1 0 2 0 1 0 1 0 1 0 1 0 1 2 0 0 0 0 1 0 0 12 1 1341.7041 P04075 P04075 88 99 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.008699 86.911 By MS/MS By matching 7.67 0.471 1 2 2 1 10691000 10671000 19860 336 444 345 864;865;866 622;623 622 2 352820 169430 ADDILDLK QLDLAKNRLYQAIQRADDILDLKFCMDGVQ LYQAIQRADDILDLKFCMDGVQTALRSEDY R A D L K F 1 0 0 3 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 901.47566 Q9H9E3 Q9H9E3 129 136 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.0085164 123.98 By MS/MS 5 0 1 1 537990 537990 0 337 2534 346 867 624 624 1 22113 0 ADDKLIAEEGVDSLNVK NFLRFQLTMRLRSIKADDKLIAEEGVDSLN DKLIAEEGVDSLNVKELQAACRARGMRALG K A D V K E 2 0 1 3 0 0 2 1 0 1 2 2 0 0 0 1 0 0 0 2 0 0 17 1 1814.9262 O95202 O95202 357 373 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2;3 2.1355E-17 196.37 By MS/MS 5 0 2 2 2470800 2470800 0 338 374 347 868;869 625;626 626 2 101560 0 ADDLDFETGDAGASATFPMQCSALR ______________________________ AGASATFPMQCSALRKNGFVVLKGRPCKIV M A D L R K 5 1 0 4 1 1 1 2 0 0 2 0 1 2 1 2 2 0 0 0 0 0 25 0 2645.1374 P63241;Q6IS14 P63241 2 26 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 3 0.009715 43.233 By MS/MS 10 0 1 1 409600 409600 0 339 1177 348 870 627 627 916 1 435360 0 ADDLDFETGDAGASATFPMQCSALRK ______________________________ GASATFPMQCSALRKNGFVVLKGRPCKIVE M A D R K N 5 1 0 4 1 1 1 2 0 0 2 1 1 2 1 2 2 0 0 0 0 0 26 1 2773.2323 P63241;Q6IS14 P63241 2 27 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 3 4.371E-09 118.35 By MS/MS 9.5 0.5 1 1 2 1806800 1806800 0 340 1177 349 871;872 628 628 916 1 1876100 0 ADDNATIR DGASRRGESMQPNRRADDNATIRVTNLSED SMQPNRRADDNATIRVTNLSEDTRETDLQE R A D I R V 2 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 8 0 874.41446 O75821 O75821 235 242 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.00022899 190.73 By MS/MS By MS/MS 7.4 1.02 1 2 1 1 2 3 1582800 1266800 316010 341 330 350 873;874;875;876;877 629;630 629 2 104450 1379400 ADEASELACPTPK VRQLTLRKLQELSSKADEASELACPTPKED SKADEASELACPTPKEDGLAQQQTQLNLRS K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 P49327 P49327 2194 2206 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.0516E-25 242.97 By MS/MS By MS/MS 2.33 0.943 1 3 1 1 5 1 14589000 14555000 33866 342 915 351 878;879;880;881;882;883 631;632;633;634;635;636;637 636 7 603460 28512 ADEASELACPTPKEDGLAQQQTQLNLR VRQLTLRKLQELSSKADEASELACPTPKED KEDGLAQQQTQLNLRSLLVNPEGPTLMRLN K A D L R S 4 1 1 2 1 4 3 1 0 0 4 1 0 0 2 1 2 0 0 0 0 0 27 1 2982.4353 P49327 P49327 2194 2220 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 1.31E-11 120.63 By MS/MS 2.5 0.5 1 1 2 2825500 2825500 0 343 915 352 884;885 638;639;640 638 3 108550 0 ADEDPALFQSVK IDIADRSQVEPADYKADEDPALFQSVKTKR DYKADEDPALFQSVKTKRGPLGPNWKKELA K A D V K T 2 0 0 2 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 1 0 0 12 0 1318.6405 P48739 P48739 156 167 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 2 0.010489 103.21 By MS/MS 8 0 1 1 906980 906980 0 344 913 353 886 641 641 1 59833 0 ADEEKLPPGWEK ______________________________ ______________________________ M A D E K R 1 0 0 1 0 0 3 1 0 0 1 2 0 0 2 0 0 1 0 0 0 0 12 1 1397.6827 Q13526;O15428 Q13526 2 13 PIN1;PIN1P1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1;Putative PIN1-like protein yes no 2 0.0014113 138.99 By MS/MS 10 0 1 1 460500 460500 0 345 1378 354 887 642 642 1 489470 0 ADEEKLPPGWEKR ______________________________ ______________________________ M A D K R M 1 1 0 1 0 0 3 1 0 0 1 2 0 0 2 0 0 1 0 0 0 0 13 2 1553.7838 Q13526;O15428 Q13526 2 14 PIN1;PIN1P1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1;Putative PIN1-like protein yes no 3 0.0055814 101.61 By MS/MS 10 0 1 1 523950 523950 0 346 1378 355 888 643 643 1 556900 0 ADEELEALRR ______________________________ ______________________________ M A D R R Q 2 2 0 1 0 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 1 1200.6099 O14737 O14737 2 11 PDCD5 Programmed cell death protein 5 no no 1 NaN NaN NaN 0 0 0 347 124 0 0 0 ADEGISFR SDPKRTIAQDYGVLKADEGISFRGLFIIDD QDYGVLKADEGISFRGLFIIDDKGILRQIT K A D F R G 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 8 0 893.4243 Q06830 Q06830 121 128 PRDX1 Peroxiredoxin-1 yes yes 2 0.0081596 125.31 By MS/MS 9 0 1 1 3696800 3696800 0 348 1277 356 889 644 644 1 2121600 0 ADEVAPAKK STPAPSRTASFSESRADEVAPAKKAKPAMP SFSESRADEVAPAKKAKPAMPQDSVPSPRS R A D K K A 3 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 9 1 927.50255 P53396 P53396 461 469 ACLY ATP-citrate synthase yes yes 2 0.023724 113.26 By MS/MS 1 0 1 1 217230 217230 0 349 1001 357 890 645 645 1 10614 0 ADFAQACQDAGVR NVDAVHPGYGFLSERADFAQACQDAGVRFI ERADFAQACQDAGVRFIGPSPEVVRKMGDK R A D V R F 4 1 0 2 1 2 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 13 0 1407.6201 P11498 P11498 125 137 PC Pyruvate carboxylase, mitochondrial yes yes 2 2.901E-17 210.95 By MS/MS 4.33 1.97 1 1 1 1 1 1 6 11956000 11956000 0 350 555 358 891;892;893;894;895;896 646;647;648;649 647 4 314080 0 ADFDDRVSDEEKVR ______________________________ MADFDDRVSDEEKVRIAAKFITHAPPGEFN M A D V R I 1 2 0 4 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 14 2 1679.7751 P52907 P52907 2 15 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 3 6.3355E-05 139.3 By MS/MS 7.5 0.5 1 1 2 8739600 8739600 0 351 994 359 897;898 650;651 650 2 349110 0 ADFDTYDDRAYSSFGGGR ______________________________ DTYDDRAYSSFGGGRGSRGSAGGHGSRSQK M A D G R G 2 2 0 4 0 0 0 3 0 0 0 0 0 2 0 2 1 0 2 0 0 0 18 1 1998.8344 Q15056 Q15056 2 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.022352 87.498 By MS/MS 9 0.816 1 1 1 3 5375100 5375100 0 352 1474 360 899;900;901 652 652 1 488380 0 ADFFEDENGQR QSVTMGYYKNEAKTKADFFEDENGQRWLCT AKTKADFFEDENGQRWLCTGDIGEFEPDGC K A D Q R W 1 1 1 2 0 1 2 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1326.5477 O95573 O95573 548 558 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 8.7972E-07 180.09 By MS/MS 2.75 1.48 1 1 1 1 4 5489800 5489800 0 353 400 361 902;903;904;905 653;654 654 1 227860 0 ADFLKGLPVYNK ______________________________ ______________________________ M A D N K S 1 0 1 1 0 0 0 1 0 0 2 2 0 1 1 0 0 0 1 1 0 0 12 1 1363.75 Q9BW61 Q9BW61 2 13 DDA1 DET1- and DDB1-associated protein 1 yes yes 2 0.052603 87.298 By MS/MS 10 0 1 1 88706 88706 0 354 2389 362 906 655 655 1 94285 0 ADFPAGIPECGTDALR NLDPSEVEKAKEGQKADFPAGIPECGTDAL DFPAGIPECGTDALRFGLCAYMSQGRDINL K A D L R F 3 1 0 2 1 0 1 2 0 1 1 0 0 1 2 0 1 0 0 0 0 0 16 0 1688.7828 P26640 P26640 908 923 VARS Valine--tRNA ligase yes yes 2 0.019967 80.17 By MS/MS 3 0 1 1 793040 793040 0 355 699 363 907 656;657 657 2 20702 0 ADFQGISPER ILAVCLRIQINPQNKADFQGISPERAFADF NPQNKADFQGISPERAFADFLFASTILHLV K A D E R A 1 1 0 1 0 1 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 10 0 1118.5356 P61803 P61803 83 92 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 2 0.0049993 107.45 By MS/MS 10 0 1 1 1027400 1027400 0 356 1106 364 908 658 658 1 1092100 0 ADFSPFGNSQGPSR WIQTVEDLHERVPEKADFSPFGNSQGPSRV KADFSPFGNSQGPSRVAQFLVIYAPRRGIL K A D S R V 1 1 1 1 0 1 0 2 0 0 0 0 0 2 2 3 0 0 0 0 0 0 14 0 1465.6586 Q9H2M9 Q9H2M9 447 460 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 2.3649E-12 207.95 By MS/MS 3.5 0.5 1 1 2 2598100 2598100 0 357 2481 365 909;910 659 659 1 68259 0 ADFVLAANSYDLAIK LANRKRECGNAHYQRADFVLAANSYDLAIK ADFVLAANSYDLAIKAITSSAKVDMTFEEE R A D I K A 4 0 1 2 0 0 0 0 0 1 2 1 0 1 0 1 0 0 1 1 0 0 15 0 1609.8352 Q14318 Q14318 235 249 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 6.5593E-39 268.14 By MS/MS 7.5 1.5 1 1 2 13294000 13294000 0 358 1428 366 911;912 660;661 660 2 133000 0 ADGAEAKPAE RKGAGDGSDEEVDGKADGAEAKPAE_____ EVDGKADGAEAKPAE_______________ K A D A E - 4 0 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 10 1 957.44034 P35579 P35579 1951 1960 MYH9 Myosin-9 yes yes 2 0.049151 110.53 By MS/MS 2 0 1 1 111840 111840 0 359 793 367 913 662 662 1 5558.9 0 ADGELNVDSLITR ______________________________ ______________________________ M A D T R L 1 1 1 2 0 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1401.71 P62140 P62140 2 14 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 2 1.2107E-25 237.76 By MS/MS 9 0.816 1 1 1 3 1637500 1637500 0 360 1115 368 914;915;916 663;664 663 2 198900 0 ADGGTQVIDTK GYGKITGKNQVTATKADGGTQVIDTKNILI TATKADGGTQVIDTKNILIATGSEVTPFPG K A D T K N 1 0 0 2 0 1 0 2 0 1 0 1 0 0 0 0 2 0 0 1 0 0 11 0 1103.5459 P09622 P09622 167 177 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 0.02823 82.494 By MS/MS 6 0 1 1 50916 0 50916 361 518 369 917 665 665 1 0 156150 ADGILVPGGFGIR EDPVKFHEAWQKLCKADGILVPGGFGIRGT CKADGILVPGGFGIRGTLGKLQAISWARTK K A D I R G 1 1 0 1 0 0 0 4 0 2 1 0 0 1 1 0 0 0 0 1 0 0 13 0 1270.7034 Q9NRF8 Q9NRF8 364 376 CTPS2 CTP synthase 2 yes yes 2 0.015108 88.496 By MS/MS 5.5 0.5 1 1 2 751270 751270 0 362 2604 370 918;919 666 666 1 17381 0 ADGIVPETWIDGPK STRSGRIIPKPEFPRADGIVPETWIDGPKD RADGIVPETWIDGPKDTSVEDALERTYVPC R A D P K D 1 0 0 2 0 0 1 2 0 2 0 1 0 0 2 0 1 1 0 1 0 0 14 0 1496.7511 Q96A35 Q96A35 162 175 MRPL24 39S ribosomal protein L24, mitochondrial yes yes 2 0.034805 75.739 By MS/MS 9 0 1 1 428920 428920 0 363 2115 371 920 667 667 1 246160 0 ADGIVSKNF RRMGESDDSILRLAKADGIVSKNF______ ILRLAKADGIVSKNF_______________ K A D N F - 1 0 1 1 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 9 1 949.4869 P63220 P63220 75 83 RPS21 40S ribosomal protein S21 yes yes 2 0.011205 123.35 By MS/MS 10 0 1 1 0 0 0 364 1176 372 921 668 668 1 0 0 ADGKISEQSDAK SHVVSQHQALLGTIRADGKISEQSDAKLKE TIRADGKISEQSDAKLKEIVTNFLAGFEA_ R A D A K L 2 0 0 2 0 1 1 1 0 1 0 2 0 0 0 2 0 0 0 0 0 0 12 1 1247.5994 P25705 P25705 528 539 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00036593 166.11 By MS/MS By matching 6 0 2 1 1 6263100 6251600 11543 365 687 373 922;923 669 669 1 48750 35403 ADGQVAELLLR ______________________________ ______________________________ M A D L R R 2 1 0 1 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 11 0 1183.6561 Q9Y285 Q9Y285 2 12 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2 5.8459E-23 248.09 By MS/MS 6.43 2.06 1 1 2 1 1 1 7 9615200 9615200 0 366 2876 374 924;925;926;927;928;929;930 670;671;672;673;674;675;676 673 7 144000 0 ADGTATAPPPR GRDPKYICQKPSIQKADGTATAPPPRSNHA SIQKADGTATAPPPRSNHAAEEASSEDEEE K A D P R S 3 1 0 1 0 0 0 1 0 0 0 0 0 0 3 0 2 0 0 0 0 0 11 0 1052.5251 Q7Z6Z7 Q7Z6Z7 707 717 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00012031 158.76 By MS/MS 1.5 0.5 1 1 2 294690 294690 0 367 1803 375 931;932 677;678 677 2 14492 0 ADGYEPPVQESV SGKATGDETGAKVERADGYEPPVQESV___ VERADGYEPPVQESV_______________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 P61247 P61247 253 264 RPS3A 40S ribosomal protein S3a yes yes 2 0.010893 96.015 By MS/MS By matching 8 0.707 1 2 1 2 2 6956100 6710900 245190 368 1094 376 933;934;935;936 679 679 1 515990 2053800 ADGYVLEGK KLLACIASRPGQCGRADGYVLEGKELEFYL PGQCGRADGYVLEGKELEFYLRKIKARKGK R A D G K E 1 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 1 1 0 0 9 0 950.47091 P62241 P62241 185 193 RPS8 40S ribosomal protein S8 yes yes 2 0.0039402 134.77 By MS/MS By matching 8.75 0.829 2 1 1 3 1 5080100 5013700 66348 369 1118 377 937;938;939;940 680 680 1 744280 566030 ADHGEPIGR QYAWESSAGGSFTVRADHGEPIGRGTKVIL GSFTVRADHGEPIGRGTKVILHLKEDQTEY R A D G R G 1 1 0 1 0 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 9 0 950.45699 P08238 P08238 169 177 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.002708 122.19 By MS/MS By matching 5 2.58 1 1 1 1 1 1 1 1 1 7 2 11084000 11049000 34942 370 501 378 941;942;943;944;945;946;947;948;949 681;682 682 2 425610 32165 ADHVQSLAQLENLCK ______________________________ ADHVQSLAQLENLCKQLYETTDTTTRLQAE M A D C K Q 2 0 1 1 1 2 1 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1724.8516 Q9UIA9 Q9UIA9 2 16 XPO7 Exportin-7 yes yes 2 1.4824E-14 231.06 By MS/MS 4.5 0.5 1 1 2 1269100 1269100 0 371 2790 379 950;951 683 683 1 35323 0 ADIDLTK IKGVGRRYAHVVLRKADIDLTKRAGELTED YAHVVLRKADIDLTKRAGELTEDEVERVIT K A D T K R 1 0 0 2 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 7 0 774.41233 P62269 P62269 48 54 RPS18 40S ribosomal protein S18 yes yes 2 0.0088489 157.21 By MS/MS 9.5 0.5 1 1 2 3012400 3012400 0 372 1124 380 952;953 684 684 1 2152000 0 ADIGVAMGIAGSDVSK AVTGDGVNDSPALKKADIGVAMGIAGSDVS DIGVAMGIAGSDVSKQAADMILLDDNFASI K A D S K Q 3 0 0 2 0 0 0 3 0 2 0 1 1 0 0 2 0 0 0 2 0 0 16 0 1489.7446 P05023;P13637 P05023 728 743 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 1.2872E-14 195.72 By MS/MS 2.83 1.34 1 2 1 1 1 6 10776000 10776000 0 373 463;575 381;382 954;955;956;957;958;959 685;686;687;688;689;690 688 247 6 457700 0 ADIQTER ______________________________ ______________________________ M A D E R A 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 7 0 831.40865 P62280 P62280 2 8 RPS11 40S ribosomal protein S11 yes yes 2 0.017986 102.51 By MS/MS 9 0 1 1 971280 971280 0 374 1127 383 960 691 691 1 557420 0 ADKDYHFK SPLRPQNYLFGCELKADKDYHFKVDNDENE LFGCELKADKDYHFKVDNDENEHQLSLRTV K A D F K V 1 0 0 2 0 0 0 0 1 0 0 2 0 1 0 0 0 0 1 0 0 0 8 1 1022.4821 P06748 P06748 25 32 NPM1 Nucleophosmin yes yes 3 0.0067769 124.08 By MS/MS 5 2.55 1 1 1 1 4 2896200 2896200 0 375 485 384 961;962;963;964 692;693 693 2 64021 0 ADKEAAFDDAVEER ______________________________ MADKEAAFDDAVEERVINEEYKIWKKNTPF M A D E R V 4 1 0 3 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 14 1 1564.7005 Q09028 Q09028 2 15 RBBP4 Histone-binding protein RBBP4 yes yes 2 7.8873E-12 206.74 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 56877000 56482000 394600 376 1296 385 965;966;967;968;969;970 694;695;696;697;698;699 699 6 1791700 1210200 ADKEGDYYVLNGSK SEAGAGSDSFALKTRADKEGDYYVLNGSKM RADKEGDYYVLNGSKMWISSAEHAGLFLVM R A D S K M 1 0 1 2 0 0 1 2 0 0 1 2 0 0 0 1 0 0 2 1 0 0 14 1 1557.7311 P45954 P45954 192 205 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 3 0.029956 63.682 By MS/MS 6.5 0.5 1 1 2 8835300 8835300 0 377 871 386 971;972 700 700 1 80995 0 ADKLAEEHSS QAFYMVGPIEEAVAKADKLAEEHSS_____ EAVAKADKLAEEHSS_______________ K A D S S - 2 0 0 1 0 0 2 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 10 1 1085.4989 P06576 P06576 520 529 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 0.0016827 145.46 By MS/MS By MS/MS 7.33 1.89 4 2 3 3 63169000 62584000 585110 378 478 387 973;974;975;976;977;978 701;702;703;704;705 704 5 592440 2178000 ADKNEVAAEVAK VTKQGNIVRELKAQKADKNEVAAEVAKLLD AQKADKNEVAAEVAKLLDLKKQLAVAEGKP K A D A K L 4 0 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 12 1 1243.6408 P56192 P56192 864 875 MARS Methionine--tRNA ligase, cytoplasmic yes yes 3 0.048362 61.167 By MS/MS 4 0 1 1 1166000 1166000 0 379 1042 388 979 706 706 1 31831 0 ADKQISLPAK ______________________________ ______________________________ M A D A K L 2 0 0 1 0 1 0 0 0 1 1 2 0 0 1 1 0 0 0 0 0 0 10 1 1069.6132 Q9H936 Q9H936 2 11 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 8.6253E-11 212.03 By MS/MS By MS/MS 8.4 0.49 3 2 4 1 32320000 32279000 41607 380 2528 389 980;981;982;983;984 707;708 708 2 2288600 354950 ADLEEQLSDEEKVR ______________________________ MADLEEQLSDEEKVRIAAKFIIHAPPGEFN M A D V R I 1 1 0 2 0 1 4 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1659.7952 P47755 P47755 2 15 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 2 5.9177E-05 175.74 By MS/MS 7 0 1 1 1732700 1732700 0 381 894 390 985 709 709 1 30964 0 ADLEGSLDSK NMLTQQEVPVVILAKADLEGSLDSKIGIPS VILAKADLEGSLDSKIGIPSTSSEDTILAQ K A D S K I 1 0 0 2 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1033.4928 Q15031 Q15031 364 373 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.00064272 139.38 By MS/MS 4.5 0.5 1 1 2 7406400 7406400 0 382 1467 391 986;987 710 710 1 212350 0 ADLGALELWR DNTIFFTTYANGSCKADLGALELWRTSDLG NGSCKADLGALELWRTSDLGKSFKTIGVKI K A D W R T 2 1 0 1 0 0 1 1 0 0 3 0 0 0 0 0 0 1 0 0 0 0 10 0 1142.6084 Q99523 Q99523 279 288 SORT1 Sortilin yes yes 2 6.9518E-05 169.09 By MS/MS 4 0 1 1 390730 390730 0 383 2271 392 988 711 711 1 10666 0 ADLIAYLK GTKMIFVGIKKKEERADLIAYLKKATNE__ IKKKEERADLIAYLKKATNE__________ R A D L K K 2 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 0 8 0 905.52222 P99999 P99999 93 100 CYCS Cytochrome c yes yes 2 0.0043796 139.68 By MS/MS 10 0 1 1 588280 588280 0 384 1227 393 989 712 712 1 625280 0 ADLINNLGTIAK ERTLTLVDTGIGMTKADLINNLGTIAKSGT MTKADLINNLGTIAKSGTKAFMEALQAGAD K A D A K S 2 0 2 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1241.698 P07900;Q14568;P08238;Q58FF8 P08238 96 107 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 7.075E-11 199.8 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 135110000 135110000 0 385 501;494 394 990;991;992;993;994;995;996;997;998;999 713;714;715;716;717;718;719;720;721;722 719 10 5030200 0 ADLLLSTQPGREEGSPLELER LQASDLPASASLPAKADLLLSTQPGREEGS TQPGREEGSPLELERLKLEPHEGLLLRFPY K A D E R L 1 2 0 1 0 1 4 2 0 0 5 0 0 0 2 2 1 0 0 0 0 0 21 1 2309.1863 P08195 P08195 593 613 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 3 0.00068262 87.228 By MS/MS 5 0.816 1 1 1 3 7250500 7250500 0 386 499 395 1000;1001;1002 723;724 724 2 215660 0 ADLPEGVAVSGPSPAEFCR HYMDGQTPCLFVSSKADLPEGVAVSGPSPA EGVAVSGPSPAEFCRKHRLPAPVPFSCAGP K A D C R K 3 1 0 1 1 0 2 2 0 0 1 0 0 1 3 2 0 0 0 2 0 0 19 0 1957.9204 Q8IXI1 Q8IXI1 526 544 RHOT2 Mitochondrial Rho GTPase 2 yes yes 2 1.7928E-11 169.04 By MS/MS 5 0 1 1 781140 781140 0 387 1871 396 1003 725 725 1 32108 0 ADLQTSSQR VHNDSNQVVKDILVKADLQTSSQRLNLSAS KDILVKADLQTSSQRLNLSASNAAVAELKP K A D Q R L 1 1 0 1 0 2 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 9 0 1004.4887 A5PLN9 A5PLN9 101 109 TRAPPC13 Trafficking protein particle complex subunit 13 yes yes 2 0.0007076 148.69 By MS/MS 7 0 1 1 621070 621070 0 388 18 397 1004 726 726 1 11099 0 ADLTALFLPR SGKVKRDAEKKDQMKADLTALFLPRQPPMS KDQMKADLTALFLPRQPPMSLAEAEQLMEE K A D P R Q 2 1 0 1 0 0 0 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 10 0 1115.6339 Q13045 Q13045 875 884 FLII Protein flightless-1 homolog yes yes 2 0.0008231 131.06 By MS/MS 3.5 0.5 1 1 2 177840 177840 0 389 1328 398 1005;1006 727 727 1 4678.3 0 ADLTEYLSTHYK QAVEGPSENVRKLSRADLTEYLSTHYKAPR LSRADLTEYLSTHYKAPRMVLAAAGGVEHQ R A D Y K A 1 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 2 0 2 0 0 0 12 0 1439.6933 P31930 P31930 214 225 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 0.00076285 136.02 By MS/MS 6.5 0.5 1 1 2 2567900 2567900 0 390 756 399 1007;1008 728 728 1 28589 0 ADLYLEGK SGTSWSYVLPGPDQRADLYLEGKDQLGGWF LPGPDQRADLYLEGKDQLGGWFQSSLLTSV R A D G K D 1 0 0 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 8 0 907.4651 Q9NSE4 Q9NSE4 618 625 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.024314 101.43 By MS/MS 4 0 1 1 3613300 3613300 0 391 2624 400 1009 729 729 1 98639 0 ADMVIEAVFEDLSLK FSNLTGQLDYQGFEKADMVIEAVFEDLSLK ADMVIEAVFEDLSLKHRVLKEVEAVIPDHC K A D L K H 2 0 0 2 0 0 2 0 0 1 2 1 1 1 0 1 0 0 0 2 0 0 15 0 1678.8488 P40939 P40939 441 455 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.01082 83.182 By MS/MS 5.5 0.5 1 1 2 112730 112730 0 392 835 401 1010;1011 730;731 731 582 2 2039.2 0 ADNIFTATER LHLRIFDPSPEDIARADNIFTATERNRIDY EDIARADNIFTATERNRIDYVSSAVRIDHA R A D E R N 2 1 1 1 0 0 1 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 10 0 1136.5462 Q8N3Z3 Q8N3Z3 81 90 GTPBP8 GTP-binding protein 8 yes yes 2 1.1682E-07 194.12 By MS/MS 9 0.816 1 1 1 3 5870300 5870300 0 393 1912 402 1012;1013;1014 732;733 732 2 644410 0 ADPEVCCFITK ______________________________ ______________________________ M A D T K I 1 0 0 1 2 0 1 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 11 0 1338.5948 Q7Z2W4 Q7Z2W4 2 12 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0010671 116.77 By MS/MS 4.5 0.5 1 1 2 1538900 1538900 0 394 1777 403 1015;1016 734 734 1 45296 0 ADPNGPVEGTVIESFTDK LAEATVALAEMLELKADPNGPVEGTVIESF NGPVEGTVIESFTDKGRGLVTTAIIQRGTL K A D D K G 1 0 1 2 0 0 2 2 0 1 0 1 0 1 2 1 2 0 0 2 0 0 18 0 1874.8898 P46199 P46199 349 366 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 0.0027429 108.06 By MS/MS 5 0 1 1 500060 500060 0 395 879 404 1017 735 735 1 20555 0 ADPSILQNLR KLDKEQAALEKIESKADPSILQNLRALVAM KIESKADPSILQNLRALVAMNENLKSQEQE K A D L R A 1 1 1 1 0 1 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 10 0 1125.6142 Q567U6 Q567U6 378 387 CCDC93 Coiled-coil domain-containing protein 93 yes yes 2 0.038536 86.898 By MS/MS 5 0 1 1 0 0 0 396 1594 405 1018 736 736 1 0 0 ADPSLLGFSVNASSER AVQSGKKKKKQKMVRADPSLLGFSVNASSE DPSLLGFSVNASSERLNMGEIETLDDY___ R A D E R L 2 1 1 1 0 0 1 1 0 0 2 0 0 1 1 4 0 0 0 1 0 0 16 0 1648.8057 Q6Y7W6 Q6Y7W6 1272 1287 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 9.085E-06 140.33 By MS/MS 3.5 0.5 1 1 2 419890 419890 0 397 1736 406 1019;1020 737 737 1 11149 0 ADQDRLDLEER ATLAQELEKFNRDQKADQDRLDLEERKKVE RDQKADQDRLDLEERKKVETEAKIKQKLRE K A D E R K 1 2 0 3 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 11 1 1358.6426 Q14683 Q14683 402 412 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.010026 96.067 By MS/MS 3 0.816 1 1 1 3 2246200 2246200 0 398 1440 407 1021;1022;1023 738 738 1 59893 0 ADQFEYVMYGK LDDGEYNPTDDRPSRADQFEYVMYGKVYRI RPSRADQFEYVMYGKVYRIEGDETSTEAAT R A D G K V 1 0 0 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 2 1 0 0 11 0 1349.5962 P52434 P52434 85 95 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 2 8.7855E-05 163.66 By MS/MS 10 0 1 1 194110 194110 0 399 986 408 1024 739 739 1 206320 0 ADQFLVGTSR VPDQYGTIRAVAEGKADQFLVGTSRNFILR VAEGKADQFLVGTSRNFILRGTFNDGFQIE K A D S R N 1 1 0 1 0 1 0 1 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1092.5564 Q9HC35 Q9HC35 563 572 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.00021844 176.48 By MS/MS 1.5 0.5 1 1 2 342910 342910 0 400 2557 409 1025;1026 740 740 1 16864 0 ADQLTEEQIAEFK ______________________________ ______________________________ M A D F K E 2 0 0 1 0 2 3 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1520.7359 P0DP25;P0DP24;P0DP23 P0DP25 2 14 yes no 2 4.6619E-08 184.98 By MS/MS 9.5 0.5 1 1 2 2624800 2624800 0 401 531 410 1027;1028 741;742 742 2 2586600 0 ADQPKPISPLK ______________________________ ______________________________ M A D L K N 1 0 0 1 0 1 0 0 0 1 1 2 0 0 3 1 0 0 0 0 0 0 11 1 1192.6816 O43772 O43772 2 12 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0091806 115 By MS/MS By matching 8.75 0.829 2 1 1 3 1 27001000 26959000 41506 402 222 411 1029;1030;1031;1032 743;744 744 2 2622900 354100 ADRDESSPYAAMLAAQDVAQR GKETICRVTGGMKVKADRDESSPYAAMLAA SPYAAMLAAQDVAQRCKELGITALHIKLRA K A D Q R C 6 2 0 3 0 2 1 0 0 0 1 0 1 0 1 2 0 0 1 1 0 0 21 1 2264.0492 P62263 P62263 64 84 RPS14 40S ribosomal protein S14 yes yes 3 0.00035345 97.589 By MS/MS 10 0 1 1 1555300 1555300 0 403 1122 412 1033 745 745 879 1 1653200 0 ADSELQLVEQR ______________________________ ______________________________ M A D Q R I 1 1 0 1 0 2 2 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1286.6466 P07741 P07741 2 12 APRT Adenine phosphoribosyltransferase yes yes 2 9.1949E-06 173.24 By MS/MS 9.5 0.5 1 1 2 2126700 2126700 0 404 492 413 1034;1035 746;747;748 748 3 1473800 0 ADTLTDEINFLR DVDAAYMNKVELQAKADTLTDEINFLRALY QAKADTLTDEINFLRALYDAELSQMQTHIS K A D L R A 1 1 1 2 0 0 1 0 0 1 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1406.7042 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 288 299 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 4.823E-18 232.84 By MS/MS By MS/MS 6.33 2.21 1 1 2 1 1 1 1 1 4 5 2408000 2151100 256840 + 405 36;53;449 414 1036;1037;1038;1039;1040;1041;1042;1043;1044 749;750;751;752;753;754;755;756 754 8 153280 621000 ADTTPNGPQGAGAVQFMMTNK ______________________________ GPQGAGAVQFMMTNKLDTAMWLSRLFTVYC M A D N K L 3 0 2 1 0 2 0 3 0 0 0 1 2 1 2 0 3 0 0 1 0 0 21 0 2134.9776 P57088 P57088 2 22 TMEM33 Transmembrane protein 33 yes yes 2 7.6266E-05 104.95 By MS/MS 9 0 1 1 277510 277510 0 406 1053 415 1045 757 757 814;815 1 159270 0 ADTVGLACEAINR SLETIGPLMNGMKKRADTVGLACEAINRMF KRADTVGLACEAINRMFQKEQSELVAQALK R A D N R M 3 1 1 1 1 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 13 0 1388.6718 O75165 O75165 2103 2115 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 2.3484E-12 211.64 By MS/MS 2 0.816 1 1 1 3 1009300 1009300 0 407 287 416 1046;1047;1048 758 758 1 44224 0 ADVEDGEETCALASHSGSSGSK ______________________________ ETCALASHSGSSGSKSGGDKMFSLKKWNAV M A D S K S 3 0 0 2 1 0 3 3 1 0 1 1 0 0 0 5 1 0 0 1 0 0 22 0 2192.9128 Q9UBF6 Q9UBF6 2 23 RNF7 RING-box protein 2 yes yes 2 2.3926E-14 168.5 By MS/MS 10 0 1 1 476420 476420 0 408 2749 417 1049 759 759 1 506390 0 ADVIQATGDAICIFR GVDPVEAFAQNVLSKADVIQATGDAICIFR ADVIQATGDAICIFRELQCLTPRGRYDIRI K A D F R E 3 1 0 2 1 1 0 1 0 3 0 0 0 1 0 0 1 0 0 1 0 0 15 0 1648.8243 Q08945 Q08945 189 203 SSRP1 FACT complex subunit SSRP1 yes yes 2 3.3783E-38 256.95 By MS/MS 5 0.816 1 1 1 3 1393800 1393800 0 409 1291 418 1050;1051;1052 760 760 1 32796 0 ADVIVLAGTVCDFR HPLHIRENRSAALKKADVIVLAGTVCDFRL KADVIVLAGTVCDFRLSYGRVLSHSSKIII K A D F R L 2 1 0 2 1 0 0 1 0 1 1 0 0 1 0 0 1 0 0 3 0 0 14 0 1534.7814 A1L0T0 A1L0T0 344 357 ILVBL Acetolactate synthase-like protein yes yes 2 4.3114E-24 227.36 By MS/MS 6 0 1 1 0 0 0 410 8 419 1053 761 761 1 0 0 ADVLFIAPR ILIFSLIVTYCINAKADVLFIAPREPGAVS YCINAKADVLFIAPREPGAVSY________ K A D P R E 2 1 0 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 9 0 1000.5706 Q92542 Q92542 694 702 NCSTN Nicastrin yes yes 2 0.0023709 143.12 By MS/MS 4 0.816 1 1 1 3 1573900 1573900 0 411 2056 420 1054;1055;1056 762 762 1 43662 0 ADVLSVLR ______________________________ ______________________________ M A D L R Q 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 8 0 871.51272 Q6P1J9 Q6P1J9 2 9 CDC73 Parafibromin yes yes 2 0.0053146 114.28 By MS/MS 5.5 0.5 1 1 2 877290 877290 0 412 1699 421 1057;1058 763 763 1 7868 0 ADVQSIIGLQR VGRMFKQFNKLTEDKADVQSIIGLQRFFET TEDKADVQSIIGLQRFFETRMNEAFGDTKF K A D Q R F 1 1 0 1 0 2 0 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1198.667 Q13263 Q13263 780 790 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0053753 106.16 By MS/MS 9.5 0.5 1 1 2 518390 518390 0 413 1351 422 1059;1060 764 764 1 379650 0 ADVVAQSR PLLIGTDVSLARLQKADVVAQSRISFPEKE SLARLQKADVVAQSRISFPEKELLLLIRNH K A D S R I 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 8 0 844.44028 Q9Y4B6 Q9Y4B6 835 842 VPRBP Protein VPRBP yes yes 2 0.020958 105.52 By MS/MS 3.5 0.5 1 1 2 347320 347320 0 414 2950 423 1061;1062 765 765 1 9321.2 0 ADYNLTR LELALSITRAVRSLRADYNLTRIRPDCFLE TRAVRSLRADYNLTRIRPDCFLEVADEATG R A D T R I 1 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 7 0 851.41373 P26640 P26640 1123 1129 VARS Valine--tRNA ligase yes yes 2 0.030662 114.5 By MS/MS 3 0 1 1 1106600 1106600 0 415 699 424 1063 766 766 1 28887 0 ADYTSHLR QAAAIILNIYCSRSKADYTSHLRSLVSGLI IYCSRSKADYTSHLRSLVSGLIRLFNDSSP K A D L R S 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 1 0 0 0 8 0 961.46174 Q92616 Q92616 2184 2191 GCN1L1 Translational activator GCN1 yes yes 2 0.018285 103.56 By MS/MS 2 0 1 1 283670 283670 0 416 2068 425 1064 767 767 1 14100 0 AEAALLLLPEAAAER ______________________________ AEAALLLLPEAAAERDAREKLALWDRRPDT M A E E R D 6 1 0 0 0 0 3 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 15 0 1536.8512 Q96JB2 Q96JB2 2 16 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 0.012994 83.045 By MS/MS 5 0.816 1 1 1 3 1038400 1038400 0 417 2205 426 1065;1066;1067 768;769;770;771 770 4 28994 0 AEAALLLLPEAAAERDAR ______________________________ ALLLLPEAAAERDAREKLALWDRRPDTTAP M A E A R E 7 2 0 1 0 0 3 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 18 1 1879.0163 Q96JB2 Q96JB2 2 19 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2;3 0.042679 91.202 By MS/MS 4.75 0.829 2 1 1 4 980610 980610 0 418 2205 427 1068;1069;1070;1071 772;773 772 2 26857 0 AEAEAQAEELSFPR VGDLAQFMVQNGLSRAEAEAQAEELSFPRS RAEAEAQAEELSFPRSVVEFLQGYIGVPHG R A E P R S 4 1 0 0 0 1 4 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 14 0 1546.7264 P11498 P11498 929 942 PC Pyruvate carboxylase, mitochondrial yes yes 2 1.4111E-46 283.35 By MS/MS 4.86 2.23 1 1 1 1 1 1 1 7 20165000 20165000 0 419 555 428 1072;1073;1074;1075;1076;1077;1078 774;775;776;777 775 4 563360 0 AEAERPEEQAEASGLKK PGTGGPEDVLQPVQRAEAERPEEQAEASGL AERPEEQAEASGLKKETDVVLKVDAQEAKT R A E K K E 4 1 0 0 0 1 5 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 17 2 1841.9119 Q02952 Q02952 1072 1088 AKAP12 A-kinase anchor protein 12 yes yes 3 0.017529 77.795 By MS/MS 1 0 1 1 304540 304540 0 420 1259 429 1079 778 778 1 14879 0 AEAESLYQSK AEVKAQYEDIAQKSKAEAESLYQSKYEELQ AQKSKAEAESLYQSKYEELQITAGRHGDSV K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 1124.535 P04264;CON__P04264 P04264 367 376 KRT1 Keratin, type II cytoskeletal 1 no no 2 2.3134E-10 196.52 By MS/MS By MS/MS 5 3.05 2 2 2 1 1 1 1 1 2 1 5 9 20206000 6231400 13974000 + 421 450;45 430 1080;1081;1082;1083;1084;1085;1086;1087;1088;1089;1090;1091;1092;1093 779;780;781;782;783;784;785;786;787;788;789;790;791;792;793 793 15 2123800 30617000 AEAESLYQSKYEELQITAGR AEVKAQYEDIAQKSKAEAESLYQSKYEELQ LYQSKYEELQITAGRHGDSVRNSKIEISEL K A E G R H 3 1 0 0 0 2 4 1 0 1 2 1 0 0 0 2 1 0 2 0 0 0 20 1 2285.1176 P04264;CON__P04264 P04264 367 386 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 1.626E-05 127.36 By MS/MS By MS/MS 5.73 2.84 1 1 2 2 2 1 1 4 1 6 9 4628600 3173400 1455100 + 422 450;45 431 1094;1095;1096;1097;1098;1099;1100;1101;1102;1103;1104;1105;1106;1107;1108 794;795;796;797;798;799;800;801;802;803;804 801 11 1385800 8697900 AEAGAGSATEFQFR DTYRRSAVPPGADKKAEAGAGSATEFQFRG KAEAGAGSATEFQFRGGFGRGRGQPPQ___ K A E F R G 4 1 0 0 0 1 2 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 14 0 1440.6634 P46783;Q9NQ39 P46783 140 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 6.7261E-26 245.13 By MS/MS By MS/MS 9 0.816 2 2 2 3 3 14167000 13607000 560060 423 889 432 1109;1110;1111;1112;1113;1114 805;806;807;808 808 4 7472700 8351000 AEAGDAVVAKPGVWAR ______________________________ EAGDAVVAKPGVWARLGSWARALLRDYAEA R A E A R L 5 1 0 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 3 0 0 16 1 1595.842 Q9BSF4 Q9BSF4 15 30 C19orf52 Uncharacterized protein C19orf52 yes yes 3 0.00016993 126.56 By MS/MS 8.5 0.5 1 1 2 3652400 3652400 0 424 2336 433 1115;1116 809 809 1 296780 0 AEAGDNLGALVR TVVTGIEMFHKSLERAEAGDNLGALVRGLK LERAEAGDNLGALVRGLKREDLRRGLVMVK R A E V R G 3 1 1 1 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 12 0 1184.6149 P49411 P49411 316 327 TUFM Elongation factor Tu, mitochondrial yes yes 2 9.8184E-33 252.14 By MS/MS By MS/MS 6.09 2.78 1 1 1 2 2 2 1 1 8 3 360850000 360120000 728800 425 918 434 1117;1118;1119;1120;1121;1122;1123;1124;1125;1126;1127 810;811;812;813;814;815;816;817;818;819 817 10 9825900 3497400 AEAGPEGVAPAPEGEK KENGDKSEAQKPSEKAEAGPEGVAPAPEGE EAGPEGVAPAPEGEKKQKPARKRRMVEEIG K A E E K K 4 0 0 0 0 0 4 3 0 0 0 1 0 0 3 0 0 0 0 1 0 0 16 0 1507.7155 Q9Y4L1 Q9Y4L1 670 685 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.0055842 103.14 By MS/MS 3 0 1 1 366210 366210 0 426 2955 435 1128 820 820 1 9560 0 AEAGVPAEFSIWTR GGAHKVRAGGPGLERAEAGVPAEFSIWTRE RAEAGVPAEFSIWTREAGAGGLAIAVEGPS R A E T R E 3 1 0 0 0 0 2 1 0 1 0 0 0 1 1 1 1 1 0 1 0 0 14 0 1532.7623 P21333 P21333 2251 2264 FLNA Filamin-A yes yes 2 0.014036 88.338 By MS/MS 2.5 0.5 1 1 2 859650 859650 0 427 648 436 1129;1130 821;822 822 2 28497 0 AEAIVYK GMAFSKSEGKRKTAKAEAIVYKHGSGRIKV EGKRKTAKAEAIVYKHGSGRIKVNGIDYQL K A E Y K H 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 7 0 792.43815 P82933 P82933 281 287 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.023329 119.57 By MS/MS By matching 7.33 0.471 2 1 2 1 11428000 11395000 32718 428 1211 437 1131;1132;1133 823 823 1 222040 134310 AEALTEPLNA KRQESQLRKPENTTRAEALTEPLNA_____ ENTTRAEALTEPLNA_______________ R A E N A - 3 0 1 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 10 0 1027.5186 Q9NX76 Q9NX76 174 183 CMTM6 CKLF-like MARVEL transmembrane domain-containing protein 6 yes yes 2 0.00093624 125.82 By MS/MS 3.75 3.11 1 1 1 1 4 1650700 1650700 0 429 2684 438 1134;1135;1136;1137 824;825 825 2 752580 0 AEASGGLGGLTR RELPLRLADFGALHRAEASGGLGGLTRLRC LHRAEASGGLGGLTRLRCFQQDDAHIFCTT R A E T R L 2 1 0 0 0 0 1 4 0 0 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1087.5622 Q9BW92 Q9BW92 439 450 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 9.87E-06 174.77 By MS/MS By matching 5.75 0.829 2 1 1 3 1 26011000 25961000 50343 430 2391 439 1138;1139;1140;1141 826;827 827 2 791430 148960 AEASPHPGR ______________________________ ______________________________ M A E G R Y 2 1 0 0 0 0 1 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 9 0 920.44643 Q9BV68 Q9BV68 2 10 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 2 0.0081521 95.741 By MS/MS 7 0 1 1 1406000 1406000 0 431 2372 440 1142 828 828 1 25125 0 AEASQLGHK QEISHLIEPLANAARAEASQLGHKVSQMAQ LANAARAEASQLGHKVSQMAQYFEPLTLAA R A E H K V 2 0 0 0 0 1 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 939.47739 Q9Y490 Q9Y490 1722 1730 TLN1 Talin-1 yes yes 2 0.00013625 168.26 By MS/MS 2.5 0.5 1 1 2 533900 533900 0 432 2947 441 1143;1144 829 829 1 23776 0 AEDKEWMPVTK RGRGRGRGRGARGGKAEDKEWMPVTKLGRL RGGKAEDKEWMPVTKLGRLVKDMKIKSLEE K A E T K L 1 0 0 1 0 0 2 0 0 0 0 2 1 0 1 0 1 1 0 1 0 0 11 1 1332.6384 P15880 P15880 55 65 RPS2 40S ribosomal protein S2 yes yes 2 0.0042635 115.29 By MS/MS 8 0 1 1 0 0 0 433 602 442 1145 830 830 1 0 0 AEDNADTLALVFEAPNQEK KILKCAGNEDIITLRAEDNADTLALVFEAP ADTLALVFEAPNQEKVSDYEMKLMDLDVEQ R A E E K V 4 0 2 2 0 1 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 19 0 2073.9855 P12004 P12004 92 110 PCNA Proliferating cell nuclear antigen yes yes 2;3 4.5589E-34 285.18 By MS/MS 8.75 0.829 2 1 1 4 4977500 4977500 0 434 561 443 1146;1147;1148;1149 831;832;833;834 831 4 394820 0 AEDNFEDIITKPPVR DKKIGILHENFQTLKAEDNFEDIITKPPVR AEDNFEDIITKPPVRKFVHEKEIMAEDDQV K A E V R K 1 1 1 2 0 0 2 0 0 2 0 1 0 1 2 0 1 0 0 1 0 0 15 1 1742.8839 Q9Y6G9 Q9Y6G9 345 359 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 3 0.012221 77.633 By MS/MS 6 0 1 1 4617500 4617500 0 435 3005 444 1150 835 835 1 36008 0 AEEDEILNR DGGTVSQEEEDRKPKAEEDEILNRSPRNRK EDRKPKAEEDEILNRSPRNRKPRRE_____ K A E N R S 1 1 1 1 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1087.5146 P27824 P27824 574 582 CANX Calnexin yes yes 2 0.00086498 145.16 By MS/MS 4 0 1 1 713230 713230 0 436 711 445 1151 836 836 1 19470 0 AEEENEFQIPGR LRQMSDLRLQANWNRAEEENEFQIPGRTRP WNRAEEENEFQIPGRTRPSSDQLKEASGTD R A E G R T 1 1 1 0 0 1 4 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 12 0 1417.6474 Q8N0X7 Q8N0X7 342 353 SPG20 Spartin yes yes 2 0.00021251 152.07 By MS/MS 4.5 0.5 1 1 2 3830700 3830700 0 437 1889 446 1152;1153 837 837 1 149740 0 AEEFLTASQEAL PQDVYTIKALEAHKRAEEFLTASQEAL___ HKRAEEFLTASQEAL_______________ R A E A L - 3 0 0 0 0 1 3 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 12 0 1307.6245 Q14738 Q14738 591 602 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 2 0.00069733 125.74 By MS/MS 5 0 1 1 0 0 0 438 1444 447 1154 838 838 1 0 0 AEEGIAAGGVMDVNTALQEVLK ______________________________ GGVMDVNTALQEVLKTALIHDGLARGIREA M A E L K T 4 0 1 1 0 1 3 3 0 1 2 1 1 0 0 0 1 0 0 3 0 0 22 0 2214.1202 P25398 P25398 2 23 RPS12 40S ribosomal protein S12 yes yes 2;3 0.00022763 84.046 By MS/MS 10 0 2 2 339260 339260 0 439 684 448;449 1155;1156 839;840;841;842 841 457 4 360600 0 AEELGLPILGVLR VSDGAAAILLARRSKAEELGLPILGVLRSY SKAEELGLPILGVLRSYAVVGVPPDIMGIG K A E L R S 1 1 0 0 0 0 2 2 0 1 4 0 0 0 1 0 0 0 0 1 0 0 13 0 1378.8184 P09110 P09110 293 305 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2 0.011238 93.667 By MS/MS 7.5 0.5 1 1 2 306280 306280 0 440 511 450 1157;1158 843 843 1 8398.2 0 AEEQEFTQLCK ______________________________ ______________________________ M A E C K L 1 0 0 0 1 2 3 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 11 0 1381.6184 Q53GT1 Q53GT1 2 12 KLHL22 Kelch-like protein 22 yes yes 2 0.011301 96.113 By MS/MS 5 0 1 1 112350 112350 0 441 1586 451 1159 844 844 0 4617.9 0 AEEQPQVELFVK ______________________________ ______________________________ M A E V K A 1 0 0 0 0 2 3 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 12 0 1415.7296 O00299 O00299 2 13 CLIC1 Chloride intracellular channel protein 1 yes yes 2 0.0016893 125.74 By MS/MS 8.5 0.5 1 1 2 1032000 1032000 0 442 87 452 1160;1161 845;846 845 2 140750 0 AEETSSPVIGELWSPDQTAEASHVSR IREYLKGHYYVPLLRAEETSSPVIGELWSP LWSPDQTAEASHVSRYGGSPRDPVLTLRAF R A E S R Y 3 1 0 1 0 1 4 1 1 1 1 0 0 0 2 5 2 1 0 2 0 0 26 0 2782.3046 Q86XL3 Q86XL3 483 508 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 5.1137E-12 135.31 By MS/MS 4.5 0.5 1 1 2 1107300 1107300 0 443 1841 453 1162;1163 847 847 1 32021 0 AEEVQAWAQR EREQEQRQALEQARKAEEVQAWAQRKEREV EQARKAEEVQAWAQRKEREVLQLQEEVKNF K A E Q R K 3 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 10 0 1186.5731 Q9BYN8 Q9BYN8 143 152 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.00013862 161.27 By MS/MS 9 0 1 1 420830 420830 0 444 2417 454 1164 848 848 1 241520 0 AEEYEFLTPVEEAPK KIDKTDYMVGSYGPRAEEYEFLTPVEEAPK AEEYEFLTPVEEAPKGMLARGSYSIKSRFT R A E P K G 2 0 0 0 0 0 5 0 0 0 1 1 0 1 2 0 1 0 1 1 0 0 15 0 1750.8301 P52565 P52565 153 167 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 2 1.1631E-05 186.74 By MS/MS 8.5 0.5 1 1 2 762940 762940 0 445 987 455 1165;1166 849 849 1 85947 0 AEFGDFDIK MLFSSGTVQLTTTSRAEFGDFDIKTVLQEI LTTTSRAEFGDFDIKTVLQEIKRGKRMKCT R A E I K T 1 0 0 2 0 0 1 1 0 1 0 1 0 2 0 0 0 0 0 0 0 0 9 0 1040.4815 Q8IWS0 Q8IWS0 258 266 PHF6 PHD finger protein 6 yes yes 2 0.017701 98.033 By MS/MS 7 0 1 1 4047600 4047600 0 446 1866 456 1167 850 850 1 72331 0 AEFLDDQETR ______________________________ ______________________________ M A E T R L 1 1 0 2 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1222.5466 O14545 O14545 2 11 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 0.0016275 123.86 By MS/MS 4.5 0.5 1 1 2 586770 586770 0 447 113 457 1168;1169 851 851 1 23665 0 AEFTVETR YGPGIEPTGNMVKKRAEFTVETRSAGQGEV GNMVKKRAEFTVETRSAGQGEVLVYVEDPA R A E T R S 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 8 0 951.46616 P21333 P21333 302 309 FLNA Filamin-A yes yes 2 0.0038151 143.89 By MS/MS 1.5 0.5 1 1 2 1184200 1184200 0 448 648 458 1170;1171 852 852 1 58836 0 AEFVEVTK LKAWSVARLSQKFPKAEFVEVTKLVTDLTK LSQKFPKAEFVEVTKLVTDLTKVHKECCHG K A E T K L 1 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 8 0 921.48075 CON__P02769 CON__P02769 249 256 yes yes 2 0.01563 112.41 By MS/MS By matching 6.33 0.471 2 1 2 1 3235600 3191800 43819 + 449 43 459 1172;1173;1174 853 853 1 31217 134390 AEGDISNVANGFK GKETTNIFSNCGCVRAEGDISNVANGFKSH VRAEGDISNVANGFKSHLIRLIGNLCYKNK R A E F K S 2 0 2 1 0 0 1 2 0 1 0 1 0 1 0 1 0 0 0 1 0 0 13 0 1320.631 Q9UBB4 Q9UBB4 359 371 ATXN10 Ataxin-10 yes yes 2 1.2256E-11 218.07 By MS/MS 6.5 0.5 1 1 2 3895700 3895700 0 450 2744 460 1175;1176 854 854 1 63913 0 AEGLGEAEVR ASLRDRRLPLGPCPRAEGLGEAEVRTLLQR GPCPRAEGLGEAEVRTLLQRSVQRLPAGWT R A E V R T 2 1 0 0 0 0 3 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1029.5091 Q562E7 Q562E7 79 88 WDR81 WD repeat-containing protein 81 yes yes 2 0.00093849 125.71 By MS/MS 2 0 1 1 341950 341950 0 451 1592 461 1177 855 855 1 16997 0 AEGLQVGQDAR RIREFSLAGGIWHGRAEGLQVGQDARVLGG WHGRAEGLQVGQDARVLGGE__________ R A E A R V 2 1 0 1 0 2 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1142.568 Q8WWM7 Q8WWM7 1060 1070 ATXN2L Ataxin-2-like protein yes yes 2 0.0066863 101.35 By MS/MS 3 0 1 1 371580 371580 0 452 2041 462 1178 856 856 1 9700.2 0 AEGPGRGDEPSPS QDAVQQHQQKMCWLKAEGPGRGDEPSPS__ LKAEGPGRGDEPSPS_______________ K A E P S - 1 1 0 1 0 0 2 3 0 0 0 0 0 0 3 2 0 0 0 0 0 0 13 1 1254.5477 Q9NVI7 Q9NVI7 622 634 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.018168 128.51 By MS/MS 5.5 0.5 1 1 2 6038800 6038800 0 453 2655 463 1179;1180 857;858 857 2 77380 0 AEGSDVANAVLDGADCIMLSGETAK TQMLESMIKKPRPTRAEGSDVANAVLDGAD LDGADCIMLSGETAKGDYPLEAVRMQHLIA R A E A K G 5 0 1 3 1 0 2 3 0 1 2 1 1 0 0 2 1 0 0 2 0 0 25 0 2493.1363 P14618 P14618 343 367 PKM Pyruvate kinase PKM yes yes 2 6.2461E-31 198.98 By MS/MS 6 0 1 1 1505700 1505700 0 454 588 464 1181 859 859 1 11742 0 AEGSSTASSGSQLAEGK HSEPQARGDPGDQTKAEGSSTASSGSQLAE GSSTASSGSQLAEGKGSQMGTVQPIPCLLS K A E G K G 3 0 0 0 0 1 2 3 0 0 1 1 0 0 0 5 1 0 0 0 0 0 17 0 1565.7169 Q9NZB2 Q9NZB2 503 519 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 3.5484E-25 225.72 By MS/MS 3 0 1 1 1052100 1052100 0 455 2709 465 1182 860 860 1 27466 0 AEHIPSGPLR GHTRDYPQYRDNKPRAEHIPSGPLRQREES DNKPRAEHIPSGPLRQREESETRSESSDFE R A E L R Q 1 1 0 0 0 0 1 1 1 1 1 0 0 0 2 1 0 0 0 0 0 0 10 0 1075.5774 Q9Y520 Q9Y520 1228 1237 PRRC2C Protein PRRC2C yes yes 3 0.0075017 96.665 By MS/MS 1.5 0.5 1 1 2 505460 505460 0 456 2963 466 1183;1184 861 861 1 24799 0 AEIDLVCELAK VPVVVALNVFKTDTRAEIDLVCELAKRAGA TDTRAEIDLVCELAKRAGAFDAVPCYHWSV R A E A K R 2 0 0 1 1 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1259.6431 Q6UB35 Q6UB35 808 818 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 7.6252E-07 182.16 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 12557000 12557000 0 457 1726 467 1185;1186;1187;1188;1189;1190 862;863;864;865 863 4 339680 0 AEIDLVCELAKR VPVVVALNVFKTDTRAEIDLVCELAKRAGA DTRAEIDLVCELAKRAGAFDAVPCYHWSVG R A E K R A 2 1 0 1 1 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 12 1 1415.7442 Q6UB35 Q6UB35 808 819 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00098052 150.15 By MS/MS 4 0 1 1 573090 573090 0 458 1726 468 1191 866 866 1 15645 0 AEIELFVNR PVNFCDEEKKSDECKAEIELFVNRLDSVES KSDECKAEIELFVNRLDSVESVLPYEYTAF K A E N R L 1 1 1 0 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1089.5819 Q99805 Q99805 58 66 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 2 0.035488 94.302 By MS/MS 1 0 1 1 0 0 0 459 2293 469 1192 867 867 1 0 0 AEIGIAMGSGTAVAK AMTGDGVNDAPALKKAEIGIAMGSGTAVAK AEIGIAMGSGTAVAKTASEMVLADDNFSTI K A E A K T 4 0 0 0 0 0 1 3 0 2 0 1 1 0 0 1 1 0 0 1 0 0 15 0 1374.7177 P16615;O14983;Q93084 P16615 713 727 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 2.6995E-14 196.27 By MS/MS 2.17 1.07 2 2 1 1 6 3788100 3788100 0 460 608 470;471 1193;1194;1195;1196;1197;1198 868;869;870;871 868 391 4 168850 0 AEIISLCK TCSLFMRNIAPNISRAEIISLCKRYPGFMR IAPNISRAEIISLCKRYPGFMRVALSEPQP R A E C K R 1 0 0 0 1 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 8 0 932.5001 Q9BXP5 Q9BXP5 435 442 SRRT Serrate RNA effector molecule homolog yes yes 2 0.019809 107.01 By MS/MS 4 0 1 1 1372400 1372400 0 461 2402 472 1199 872 872 1 37465 0 AEINILLCGDPGTSK GTRKDFSHTGRGKFRAEINILLCGDPGTSK AEINILLCGDPGTSKSQLLQYVYNLVPRGQ R A E S K S 1 0 1 1 1 0 1 2 0 2 2 1 0 0 1 1 1 0 0 0 0 0 15 0 1586.7974 P33991 P33991 502 516 MCM4 DNA replication licensing factor MCM4 yes yes 2 2.4865E-07 198.23 By MS/MS 4 0 1 1 977470 977470 0 462 773 473 1200 873 873 1 26684 0 AEITDAEGLGLK PSKPPPVELRAAALRAEITDAEGLGLKLED ALRAEITDAEGLGLKLEDRETVIKELKKSL R A E L K L 2 0 0 1 0 0 2 2 0 1 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1215.6347 Q14203 Q14203 933 944 DCTN1 Dynactin subunit 1 yes yes 2 0.00096208 133.75 By MS/MS 2 0.816 1 1 1 3 2103000 2103000 0 463 1420 474 1201;1202;1203 874 874 1 58568 0 AEITLVATKPEK MKSIPLAMAPVFEQKAEITLVATKPEKLAP EQKAEITLVATKPEKLAPSRQDIFQEQLAA K A E E K L 2 0 0 0 0 0 2 0 0 1 1 2 0 0 1 0 2 0 0 1 0 0 12 1 1298.7446 Q9UBF2 Q9UBF2 591 602 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00051608 161.67 By MS/MS 4.5 0.5 1 1 2 3164700 3164700 0 464 2748 475 1204;1205 875;876 875 2 122020 0 AEKDEPGAWEETFK ETPRDGDKPEETQGKAEKDEPGAWEETFKT KAEKDEPGAWEETFKTHSDSKPYGPMSVGL K A E F K T 2 0 0 1 0 0 4 1 0 0 0 2 0 1 1 0 1 1 0 0 0 0 14 1 1635.7417 Q14697 Q14697 218 231 GANAB Neutral alpha-glucosidase AB yes yes 3 0.046056 59.884 By MS/MS 4.5 0.5 1 1 2 2920400 2920400 0 465 1443 476 1206;1207 877 877 1 88905 0 AEKDNAEIR HNPKIALLNVELELKAEKDNAEIRVHTVED VELELKAEKDNAEIRVHTVEDYQAIVDAEW K A E I R V 2 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 9 1 1044.52 Q99832 Q99832 248 256 CCT7 T-complex protein 1 subunit eta yes yes 3 0.0020059 135.71 By MS/MS 6 0 1 1 24952000 24952000 0 466 2295 477 1208 878 878 1 194580 0 AELAELPLR KIFSFAHQTISALIKAELAELPLRLFLQGA ISALIKAELAELPLRLFLQGALAAGEIGFE K A E L R L 2 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 9 0 1010.576 Q96QK1 Q96QK1 574 582 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0065163 112.41 By MS/MS 6 1.41 1 1 1 1 1 5 6567200 6567200 0 467 2242 478 1209;1210;1211;1212;1213 879;880 879 2 255400 0 AELALSLLQETPR VRRLLAVYALPSWGRAELALSLLQETPRNY GRAELALSLLQETPRNYELGDVVEAVRHSQ R A E P R N 2 1 0 0 0 1 2 0 0 0 4 0 0 0 1 1 1 0 0 0 0 0 13 0 1439.7984 Q96EP0 Q96EP0 659 671 RNF31 E3 ubiquitin-protein ligase RNF31 yes yes 2 2.6194E-05 206.36 By MS/MS 4 0 1 1 283850 283850 0 468 2164 479 1214 881 881 1 7748.8 0 AELANIER QELDGSLKKIIQQQKAELANIERECLNNKQ KIIQQQKAELANIERECLNNKQQLMRAREA K A E E R E 2 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 914.48214 Q9H2G2 Q9H2G2 984 991 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0028017 151.44 By MS/MS 2 0 1 1 633670 633670 0 469 2476 480 1215 882 882 1 31497 0 AELGAGAPPAVVAR ______________________________ RAELGAGAPPAVVARTPPEPRPSPEGDPSP R A E A R T 5 1 0 0 0 0 1 2 0 0 1 0 0 0 2 0 0 0 0 2 0 0 14 0 1277.7092 Q3KQU3 Q3KQU3 7 20 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.0039582 108.43 By MS/MS 3.5 0.5 1 1 2 1145800 1145800 0 470 1567 481 1216;1217 883 883 1 30728 0 AELGAGGDGHR ______________________________ ______________________________ M A E H R G 2 1 0 1 0 0 1 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1038.4843 Q14244 Q14244 2 12 MAP7 Ensconsin yes yes 2 0.0022574 112.71 By MS/MS By matching 4 0 2 1 1 642150 610900 31257 471 1423 482 1218;1219 884 884 1 16677 65314 AELGEADEAELQR ______________________________ ______________________________ M A E Q R L 3 1 0 1 0 1 4 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 13 0 1429.6685 Q9Y5J9 Q9Y5J9 2 14 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 4.5848E-18 221.32 By MS/MS By MS/MS 10 0 2 1 1 6866700 6837100 29605 472 2970 483 1220;1221 885;886 886 2 7267100 759340 AELGEYIR AILWSLSGDSRLKMRAELGEYIRRITTVPL DSRLKMRAELGEYIRRITTVPLPTAPNIPI R A E I R R 1 1 0 0 0 0 2 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 949.4869 Q14204 Q14204 2512 2519 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.014628 113.71 By MS/MS 1.5 0.5 1 1 2 1436000 1436000 0 473 1421 484 1222;1223 887 887 1 70350 0 AELIVQPELK TIQELLQNCSDCLMRAELIVQPELKYGDGI DCLMRAELIVQPELKYGDGIQLTRSRELDE R A E L K Y 1 0 0 0 0 1 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1138.6598 P15924 P15924 85 94 DSP Desmoplakin yes yes 2 0.023236 90.108 By MS/MS 2 0 1 1 325980 325980 0 474 603 485 1224 888 888 1 16203 0 AELLDNEKPAAVVAPITTGYTVK ETEIKNKMQQKSQKKAELLDNEKPAAVVAP PAAVVAPITTGYTVKISNYGWDQSDKFVKI K A E V K I 4 0 1 1 0 0 2 1 0 1 2 2 0 0 2 0 3 0 1 3 0 0 23 1 2399.2948 Q9HB71 Q9HB71 52 74 CACYBP Calcyclin-binding protein yes yes 3 0.0042426 63.573 By MS/MS 8 0 1 1 2840700 2840700 0 475 2549 486 1225 889 889 1 187400 0 AELLLLK PLSTPMPKKRGRKSKAELLLLKLSKDLDRP KKRGRKSKAELLLLKLSKDLDRPESQSPKR K A E L K L 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 7 0 798.52149 Q8WUA4 Q8WUA4 149 155 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 2 0.036253 110.63 By MS/MS 4 0 1 1 405850 405850 0 476 2014 487 1226 890 890 1 11079 0 AELLQGGDLLR KANLTCKIAIDNLEKAELLQGGDLLRQRKT NLEKAELLQGGDLLRQRKTTKESLAQTSST K A E L R Q 1 1 0 1 0 1 1 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 11 0 1183.6561 Q12981 Q12981 112 122 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.00075472 147.62 By MS/MS 9 0.816 1 1 1 3 6504200 6504200 0 477 1321 488 1227;1228;1229 891;892 891 2 957430 0 AELLQLYER DRISPEGLEKMAQLRAELLQLYERCILLDI KMAQLRAELLQLYERCILLDIEFSDNQNVD R A E E R C 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 9 0 1133.6081 Q86US8 Q86US8 617 625 SMG6 Telomerase-binding protein EST1A yes yes 2 0.0011785 138.66 By MS/MS 3.5 0.5 1 1 2 512270 512270 0 478 1824 489 1230;1231 893 893 1 13444 0 AELMLLSEIADPTR ______________________________ MAELMLLSEIADPTRFFTDNLLSPEDWGLQ M A E T R F 2 1 0 1 0 0 2 0 0 1 3 0 1 0 1 1 1 0 0 0 0 0 14 0 1557.8072 Q99941 Q99941 2 15 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 0.052655 48.741 By MS/MS 4 0 1 1 32230 32230 0 479 2297 490 1232 894 894 1 879.84 0 AELNEFLTR QISKKRKFVADGIFKAELNEFLTRELAEDG ADGIFKAELNEFLTRELAEDGYSGVEVRVT K A E T R E 1 1 1 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1091.5611 P23396 P23396 19 27 RPS3 40S ribosomal protein S3 yes yes 2 0.00010225 170.47 By MS/MS By MS/MS 6 3.24 1 1 1 1 2 1 1 7 1 22149000 21796000 352130 480 668 491 1233;1234;1235;1236;1237;1238;1239;1240 895;896;897;898 897 4 1992200 3004100 AELQSIEEGVQGQQDALNSAK TQSVACIKHIVDCIRAELQSIEEGVQGQQD EEGVQGQQDALNSAKLHSVLFMARLCQSLG R A E A K L 3 0 1 1 0 4 3 2 0 1 2 1 0 0 0 2 0 0 0 1 0 0 21 0 2214.0764 Q8WTW3 Q8WTW3 587 607 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 1.3785E-62 279.91 By MS/MS 4 0 1 1 943110 943110 0 481 2010 492 1241 899 899 1 25746 0 AELRDDPIISTHLAK NRSLADFEKALTDYRAELRDDPIISTHLAK AELRDDPIISTHLAKLYDNLLEQNLIRVIE R A E A K L 2 1 0 2 0 0 1 0 1 2 2 1 0 0 1 1 1 0 0 0 0 0 15 1 1677.905 O00231 O00231 311 325 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 3;4 0.0042554 95.067 By MS/MS 6.67 0.471 1 2 3 18356000 18356000 0 482 80 493 1242;1243;1244 900;901 900 2 310730 0 AENFFILR EKILCHKFMRFMMMRAENFFILRRKPVEGY MRFMMMRAENFFILRRKPVEGYDISFLITN R A E L R R 1 1 1 0 0 0 1 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1008.5393 P59998 P59998 98 105 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.003788 149.65 By MS/MS 9 0.816 1 1 1 3 432380 432380 0 483 1062 494 1245;1246;1247 902;903 902 2 270540 0 AENHCELLSPAR ______________________________ ______________________________ M A E A R G 2 1 1 0 1 0 2 0 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1395.6565 Q9NXV2 Q9NXV2 2 13 KCTD5 BTB/POZ domain-containing protein KCTD5 yes yes 2 9.0225E-06 171.67 By MS/MS 8.5 0.5 1 1 2 1351600 1351600 0 484 2693 495 1248;1249 904;905;906 906 3 318830 0 AENLSVPVIGALLR PIVLLPCDLPKVVSRAENLSVPVIGALLRF RAENLSVPVIGALLRFNQAILVSRHDPASR R A E L R F 2 1 1 0 0 0 1 1 0 1 3 0 0 0 1 1 0 0 0 2 0 0 14 0 1450.8508 Q643R3 Q643R3 150 163 LPCAT4 Lysophospholipid acyltransferase LPCAT4 yes yes 2 1.4203E-05 164.9 By MS/MS 6 0 1 1 397250 397250 0 485 1667 496 1250 907 907 1 3097.8 0 AENNSEVGASGYGVPGPTWDR PTTMGGPLPPHLALKAENNSEVGASGYGVP VGASGYGVPGPTWDRGANLKDYYSRKEEQE K A E D R G 2 1 2 1 0 0 2 4 0 0 0 0 0 0 2 2 1 1 1 2 0 0 21 0 2161.9665 Q08211 Q08211 121 141 DHX9 ATP-dependent RNA helicase A yes yes 2 1.7144E-24 197.1 By MS/MS 3 0 1 1 1493800 1493800 0 486 1287 497 1251 908 908 1 38996 0 AENQPIRDVLK QLTSSELESTLETLKAENQPIRDVLKQLIL ETLKAENQPIRDVLKQLILVLCSEENMQKA K A E L K Q 1 1 1 1 0 1 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 11 1 1281.7041 P42704 P42704 673 683 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.0093477 130.41 By MS/MS 3.75 0.829 2 1 1 4 17937000 17937000 0 487 854 498 1252;1253;1254;1255 909;910;911 910 3 474700 0 AENQVLAMR KLKDELASTKQKLEKAENQVLAMRKQSEGL KQKLEKAENQVLAMRKQSEGLTKEYDRLLE K A E M R K 2 1 1 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 9 0 1030.523 P51572 P51572 205 213 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.0017265 132.76 By MS/MS 8 0 2 2 1493900 1493900 0 488 969 499;500 1256;1257 912;913 913 731 2 98551 0 AENSESLGTVPEHER ______________________________ AENSESLGTVPEHERILQEIESTDTACVGP M A E E R I 1 1 1 0 0 0 4 1 1 0 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1653.7594 Q8TAG9 Q8TAG9 2 16 EXOC6 Exocyst complex component 6 yes yes 2 4.0177E-06 147.52 By MS/MS 4.5 0.5 1 1 2 1235500 1235500 0 489 1982 501 1258;1259 914 914 1 37332 0 AENSSLNLIGK EVGLVVGNSQVAFEKAENSSLNLIGKAKTK AFEKAENSSLNLIGKAKTKENRQSIINPDW K A E G K A 1 0 2 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 11 0 1144.6088 P46459 P46459 188 198 NSF Vesicle-fusing ATPase yes yes 2 5.479E-11 208.33 By MS/MS By matching 5.33 0.471 2 1 2 1 13148000 13112000 36152 490 881 502 1260;1261;1262 915 915 1 483980 106970 AENYDIPSADR SNFHMDFIVAASNLRAENYDIPSADRHKSK SNLRAENYDIPSADRHKSKLIAGKIIPAIA R A E D R H 2 1 1 2 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1249.5575 P22314 P22314 870 880 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 0.0062868 101.35 By MS/MS 4 0 1 1 511530 511530 0 491 658 503 1263 916 916 1 13964 0 AEPAKIEAFR EEEGKGKDASGNKVKAEPAKIEAFRASLSK GNKVKAEPAKIEAFRASLSKLGDVYVNDAF K A E F R A 3 1 0 0 0 0 2 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 10 1 1130.6084 P00558 P00558 142 151 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.044238 104.22 By MS/MS 6.5 0.5 1 1 2 6238700 6238700 0 492 432 504 1264;1265 917 917 1 98322 0 AEPASVAAESLAGSR ______________________________ AEPASVAAESLAGSRARAARTVLGQVVLPG M A E S R A 5 1 0 0 0 0 2 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 15 0 1414.7052 Q9NQT5 Q9NQT5 2 16 EXOSC3 Exosome complex component RRP40 yes yes 2 1.2291E-14 239.48 By MS/MS By matching 8.75 0.829 2 1 1 3 1 5805600 5771300 34289 493 2592 505 1266;1267;1268;1269 918;919 918 2 625730 292520 AEPIWELPTR LAPEPKEPLIPASPKAEPIWELPTRAPRLS PASPKAEPIWELPTRAPRLSIGDLDFSDLG K A E T R A 1 1 0 0 0 0 2 0 0 1 1 0 0 0 2 0 1 1 0 0 0 0 10 0 1210.6346 Q9Y613 Q9Y613 526 535 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.018921 93.111 By MS/MS 3 0 1 1 327440 327440 0 494 2993 506 1270 920 920 1 8547.7 0 AEPLLGAPGELLK PRGEAAPGQGQAAVKAEPLLGAPGELLKQG VKAEPLLGAPGELLKQGTPEYSLETSAGRE K A E L K Q 2 0 0 0 0 0 2 2 0 0 4 1 0 0 2 0 0 0 0 0 0 0 13 0 1306.7497 P17482 P17482 118 130 HOXB9 Homeobox protein Hox-B9 yes yes 2 0.019068 91.549 By MS/MS 8 0 1 1 675510 675510 0 495 613 507 1271 921 921 1 44563 0 AEPTVCSFLTK ______________________________ ______________________________ M A E T K V 1 0 0 0 1 0 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 0 11 0 1251.6169 Q96H79 Q96H79 2 12 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 2 8.9243E-08 191.4 By MS/MS 9 0.816 1 1 1 3 3066600 3066600 0 496 2188 508 1272;1273;1274 922 922 1 300580 0 AEPVEVVAPR LFLAHILSPWGAEVKAEPVEVVAPRGKSGA GAEVKAEPVEVVAPRGKSGAALSKKSKGQV K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00033463 151.44 By MS/MS By MS/MS 3.6 0.49 2 3 3 2 17854000 17531000 323300 497 521 509 1275;1276;1277;1278;1279 923;924;925 925 3 477740 654750 AEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIK ______________________________ APQESTPAPPKKDIKGSYVSIHSSGFRDFL M A E I K G 3 0 1 5 0 3 7 0 0 1 2 3 0 0 5 1 1 0 1 1 0 0 34 2 3866.7858 O00148 O00148 2 35 DDX39A ATP-dependent RNA helicase DDX39A yes yes 3 0.002088 46.968 By MS/MS 6 0 1 1 3308000 3308000 0 498 70 510 1280 926 926 1 25796 0 AEQEEEFISNTLFK ENRDLRKASVTIQARAEQEEEFISNTLFKK RAEQEEEFISNTLFKKIQALQKEKETLAVN R A E F K K 1 0 1 0 0 1 4 0 0 1 1 1 0 2 0 1 1 0 0 0 0 0 14 0 1683.7992 Q16204 Q16204 105 118 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 6.2022E-12 222.73 By MS/MS 5.5 0.5 1 1 2 1550900 1550900 0 499 1532 511 1281;1282 927 927 1 18826 0 AEQESGLYR IISEWDEQERIAQEKAEQESGLYRYRSRNS RIAQEKAEQESGLYRYRSRNSRTALSEEEE K A E Y R Y 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1051.4934 Q9NU22 Q9NU22 3546 3554 MDN1 Midasin yes yes 2 0.0021123 128.6 By MS/MS By matching 1.33 0.471 2 1 2 1 504650 489510 15139 500 2635 512 1283;1284;1285 928 928 1 23976 15139 AEQINQAAGEASAVLAK EGKKQAQILASEAEKAEQINQAAGEASAVL QINQAAGEASAVLAKAKAKAEAIRILAAAL K A E A K A 6 0 1 0 0 2 2 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 17 0 1669.8635 Q9UJZ1 Q9UJZ1 234 250 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2;3 1.421E-43 263.72 By MS/MS By MS/MS 7.25 0.433 3 1 3 1 9792200 9750500 41730 501 2806 513 1286;1287;1288;1289 929;930;931 930 3 194650 171310 AEQLFSSALCAAR ELALRFARLGFGGLRAEQLFSSALCAARLL LRAEQLFSSALCAARLLRQRLPGPPDAPGA R A E A R L 4 1 0 0 1 1 1 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 13 0 1422.6925 Q96GD0 Q96GD0 82 94 PDXP Pyridoxal phosphate phosphatase yes yes 2 0.00090803 132.5 By MS/MS 8 0 1 1 596090 596090 0 502 2181 514 1290 932 932 1 39324 0 AEQSLHDLQER EHMKKMMKDLEGLHRAEQSLHDLQERLHKA GLHRAEQSLHDLQERLHKAQEEHRTVEVEK R A E E R L 1 1 0 1 0 2 2 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1324.6371 Q13586 Q13586 254 264 STIM1 Stromal interaction molecule 1 yes yes 2;3 0.0032675 115 By MS/MS 5 0.707 1 2 1 4 2721100 2721100 0 503 1384 515 1291;1292;1293;1294 933;934;935 934 3 101160 0 AERELKPAR ITKSMKMVAAAKYARAERELKPARIYGLGS AAKYARAERELKPARIYGLGSLALYEKADI R A E A R I 2 2 0 0 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 9 2 1068.604 P36542 P36542 59 67 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.044775 120.87 By MS/MS 8 0 1 1 1670500 1670500 0 504 805 516 1295 936 936 1 110200 0 AERENADIIR NEMLRVEAEARARAKAERENADIIREQIRL RARAKAERENADIIREQIRLKAAEHRQTVL K A E I R E 2 2 1 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 10 1 1185.6102 Q5T9A4;Q9NVI7 Q9NVI7 247 256 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.015424 83.397 By MS/MS 5 0 1 1 940340 940340 0 505 2655;1634 517 1296 937 937 1 38652 0 AERPEDLNLPNAVITR ______________________________ ERPEDLNLPNAVITRIIKEALPDGVNISKE M A E T R I 2 2 2 1 0 0 2 0 0 1 2 0 0 0 2 0 1 0 0 1 0 0 16 1 1806.9588 Q9NRF9 Q9NRF9 2 17 POLE3 DNA polymerase epsilon subunit 3 yes yes 2;3 2.5886E-14 205.26 By MS/MS 9 0 2 2 1872600 1872600 0 506 2605 518 1297;1298 938;939 938 2 1074700 0 AESAPLPVSADDTPEVLNR EAKVDGETASDSESRAESAPLPVSADDTPE PLPVSADDTPEVLNRALSNLSSRWKNWWVR R A E N R A 3 1 1 2 0 0 2 0 0 0 2 0 0 0 3 2 1 0 0 2 0 0 19 0 1979.98 O95674 O95674 39 57 CDS2 Phosphatidate cytidylyltransferase 2 yes yes 2 1.8939E-07 147.52 By MS/MS 2 0.816 1 1 1 3 1006200 1006200 0 507 402 519 1299;1300;1301 940 940 1 42350 0 AESDWDTVTVLR ______________________________ ______________________________ M A E L R K 1 1 0 2 0 0 1 0 0 0 1 0 0 0 0 1 2 1 0 2 0 0 12 0 1390.6729 O60869 O60869 2 13 EDF1 Endothelial differentiation-related factor 1 yes yes 2 0.00091339 142.83 By MS/MS 10 0 1 1 126340 126340 0 508 272 520 1302 941 941 1 134280 0 AESDWDTVTVLRK ______________________________ ______________________________ M A E R K K 1 1 0 2 0 0 1 0 0 0 1 1 0 0 0 1 2 1 0 2 0 0 13 1 1518.7678 O60869 O60869 2 14 EDF1 Endothelial differentiation-related factor 1 yes yes 2 0.013246 124.1 By MS/MS 10 0 1 1 166080 166080 0 509 272 521 1303 942 942 1 176530 0 AESIIIR ______________________________ ______________________________ M A E I R V 1 1 0 0 0 0 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 7 0 800.4756 Q8TAT6 Q8TAT6 2 8 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 0.047049 79.451 By MS/MS 5 0 1 1 456320 456320 0 510 1984 522 1304 943 943 1 18757 0 AESLIGVYPEQGDCVISK FQAIVISLKEEFYTKAESLIGVYPEQGDCV LIGVYPEQGDCVISKVLTFDLTKYPDANPN K A E S K V 1 0 0 1 1 1 2 2 0 2 1 1 0 0 1 2 0 0 1 2 0 0 18 0 1963.9561 Q14683 Q14683 1197 1214 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00019223 127.3 By MS/MS 2.5 0.5 1 1 2 2992900 2992900 0 511 1440 523 1305;1306 944 944 1 82739 0 AESLNGNPLFSK SQVLAKECGVENIRRAESLNGNPLFSKALA IRRAESLNGNPLFSKALADLVHSHIQSNEL R A E S K A 1 0 2 0 0 0 1 1 0 0 2 1 0 1 1 2 0 0 0 0 0 0 12 0 1275.6459 P22830 P22830 368 379 FECH Ferrochelatase, mitochondrial yes yes 2 6.0499E-14 225.22 By MS/MS 7 0 1 1 0 0 0 512 663 524 1307 945 945 1 0 0 AESLQQEVEALK AIEMATLDKEMAEERAESLQQEVEALKERV EERAESLQQEVEALKERVDELTTDLEILKA R A E L K E 2 0 0 0 0 2 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1343.6933 Q14203 Q14203 318 329 DCTN1 Dynactin subunit 1 yes yes 2 0.00018542 153.34 By MS/MS 3 0 1 1 685920 685920 0 513 1420 525 1308 946 946 1 17906 0 AESLQVTR RHIKASTKVEVDMEKAESLQVTRGDFLASL VEVDMEKAESLQVTRGDFLASLENDIKPAF K A E T R G 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 902.48214 P46459 P46459 470 477 NSF Vesicle-fusing ATPase yes yes 2 0.017898 109.48 By MS/MS 5 0 1 1 1832300 1832300 0 514 881 526 1309 947 947 1 75316 0 AESPEEVACR AIAMSLGQDIPMDQRAESPEEVACRKEEEE PMDQRAESPEEVACRKEEEERKAREKQEEE R A E C R K 2 1 0 0 1 0 3 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 10 0 1146.4975 Q7Z6Z7 Q7Z6Z7 1393 1402 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.011847 98.033 By MS/MS 1.5 0.5 1 1 2 217370 217370 0 515 1803 527 1310;1311 948 948 1 10676 0 AESSDKLYR ______________________________ ______________________________ M A E Y R V 1 1 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 9 1 1067.5247 P09874 P09874 2 10 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 3.9727E-06 190.73 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 20062000 20062000 0 516 521 528 1312;1313;1314;1315;1316;1317 949;950;951;952;953 950 5 548480 0 AESSDKLYRVEYAK ______________________________ MAESSDKLYRVEYAKSGRASCKKCSESIPK M A E A K S 2 1 0 1 0 0 2 0 0 0 1 2 0 0 0 2 0 0 2 1 0 0 14 2 1657.8312 P09874 P09874 2 15 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 5.8082E-05 154.23 By MS/MS 5.25 2.77 1 2 1 4 18783000 18783000 0 517 521 529 1318;1319;1320;1321 954;955;956 955 3 1328800 0 AESTPEIAEQR VYLQNWSHVLSYVSKAESTPEIAEQRGERD YVSKAESTPEIAEQRGERDSQTQAILTKLK K A E Q R G 2 1 0 0 0 1 3 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 11 0 1229.5888 Q13098 Q13098 225 235 GPS1 COP9 signalosome complex subunit 1 yes yes 2 0.0014397 127.76 By MS/MS 6 0 1 1 6106000 6106000 0 518 1333 530 1322 957 957 1 47615 0 AESVAAPITVR KPGEVMVKVHVVDLKAESVAAPITVRAYLN VDLKAESVAAPITVRAYLNQTVTEFKQLIS K A E V R A 3 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 1 0 0 2 0 0 11 0 1112.619 Q96K76 Q96K76 725 735 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 0.017876 91.265 By MS/MS 3.5 0.5 1 1 2 1007100 1007100 0 519 2216 531 1323;1324 958 958 1 26605 0 AETECQNTEYQQLLDIK QAQISALEEQLQQIRAETECQNTEYQQLLD TECQNTEYQQLLDIKIRLENEIQTYRSLLE R A E I K I 1 0 1 1 1 3 3 0 0 1 2 1 0 0 0 0 2 0 1 0 0 0 17 0 2081.9575 CON__P13645;P13645 CON__P13645 423 439 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.1531E-82 311.99 By MS/MS By MS/MS 5.14 2.95 2 1 2 2 1 1 1 1 2 1 7 7 7495300 6040700 1454600 + 520 49 532 1325;1326;1327;1328;1329;1330;1331;1332;1333;1334;1335;1336;1337;1338 959;960;961;962;963;964;965;966;967;968;969;970;971;972;973;974;975 974 17 776980 5489600 AETEEGPDVLR QEAAAILMARLAIYRAETEEGPDVLRWLDR AIYRAETEEGPDVLRWLDRQLIRLCQKFGE R A E L R W 1 1 0 1 0 0 3 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1214.5779 Q15436 Q15436 534 544 SEC23A Protein transport protein Sec23A yes yes 2 0.011884 96.665 By MS/MS 5.5 0.5 1 1 2 1581000 1581000 0 521 1502 533 1339;1340 976 976 1 42775 0 AETLEFNDVYQEVK ______________________________ MAETLEFNDVYQEVKGSMNDGRLRLSRQGI M A E V K G 1 0 1 1 0 1 3 0 0 0 1 1 0 1 0 0 1 0 1 2 0 0 14 0 1683.7992 Q08945 Q08945 2 15 SSRP1 FACT complex subunit SSRP1 yes yes 2 4.4841E-26 283.43 By MS/MS 5.88 2.71 1 1 1 1 1 1 1 1 8 3711500 3711500 0 522 1291 534 1341;1342;1343;1344;1345;1346;1347;1348 977;978;979;980 978 4 200250 0 AETVADTRR ______________________________ ______________________________ M A E R R L 2 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 9 1 1017.5203 O60493 O60493 2 10 SNX3 Sorting nexin-3 yes yes 2 0.00060381 163.15 By MS/MS 10 0 1 1 1824100 1824100 0 523 249 535 1349 981 981 1 1938900 0 AEVASAVCLR VVTSGLTYIKIQLVKAEVASAVCLRLHRPR IQLVKAEVASAVCLRLHRPRDASTLGLSQI K A E L R L 3 1 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1074.5492 Q9NR09 Q9NR09 3272 3281 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.00040919 148.52 By MS/MS 1.5 0.5 1 1 2 619330 619330 0 524 2596 536 1350;1351 982 982 1 30417 0 AEVEETLKR ______________________________ ______________________________ M A E K R L 1 1 0 0 0 0 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 1073.5717 Q9NP97;Q8TF09 Q9NP97 2 10 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 2 0.0025618 144.12 By MS/MS By matching 10 0 2 1 1 4820100 4662200 157930 525 2007 537 1352;1353 983 983 1 4955400 4050700 AEVEVADELLENLAK SAADLSMLVLESLEKAEVEVADELLENLAK AEVEVADELLENLAKVFSLMDPNSPERVTF K A E A K V 3 0 1 1 0 0 4 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1641.8461 Q7L5D6 Q7L5D6 96 110 GET4 Golgi to ER traffic protein 4 homolog yes yes 2 3.7183E-07 184.87 By MS/MS 8 0 1 1 270670 270670 0 526 1767 538 1354 984 984 1 17856 0 AEVGEKTEER FSDIPRRAPKKPLTRAEVGEKTEERRVERD KPLTRAEVGEKTEERRVERDILKEMFPYEA R A E E R R 1 1 0 0 0 0 4 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 10 1 1146.5517 P42167 P42167 329 338 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 1.4989E-09 198.72 By MS/MS 6 0 1 1 4610200 4610200 0 527 846 539 1355 985 985 1 35950 0 AEVLQSTQR QAALKAEQDMKAKQRAEVLQSTQRFFSEQQ MKAKQRAEVLQSTQRFFSEQQQSKQIGGGK R A E Q R F 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1030.5407 Q9Y520 Q9Y520 2815 2823 PRRC2C Protein PRRC2C yes yes 2 0.00050482 153.24 By MS/MS 3 1.41 1 1 1 1 1 5 871780 871780 0 528 2963 540 1356;1357;1358;1359;1360 986 986 1 32989 0 AEVLSEEPILK HFMKAFQKIVVLFYKAEVLSEEPILKWYKD LFYKAEVLSEEPILKWYKDAHVAKGKSVFL K A E L K W 1 0 0 0 0 0 3 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 11 0 1226.6758 Q7L1Q6 Q7L1Q6 369 379 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 7.492E-07 182.39 By MS/MS 7 0 1 1 10860000 10860000 0 529 1762 541 1361 987 987 1 194070 0 AEVQKLQMEAPHIIVGTPGR MGASCHACIGGTNVRAEVQKLQMEAPHIIV LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI R A E G R V 2 1 0 0 0 2 2 2 1 2 1 1 1 0 2 0 1 0 0 2 0 0 20 1 2173.1678 P60842 P60842 142 161 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 7.0463E-39 262.73 By MS/MS 5.83 2.27 2 1 1 1 6 3 2 2 18 286170000 286170000 0 530 1074 542;543 1362;1363;1364;1365;1366;1367;1368;1369;1370;1371;1372;1373;1374;1375;1376;1377;1378;1379 988;989;990;991;992;993;994;995;996;997;998;999;1000 999 840 13 2861100 0 AEVQVLVLDGR ______________________________ ______________________________ M A E G R G 1 1 0 1 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 3 0 0 11 0 1197.6717 P40429 P40429 2 12 RPL13A 60S ribosomal protein L13a yes yes 2 4.6755E-05 158.08 By MS/MS By matching 8.67 0.471 1 2 2 1 1054600 1017500 37176 531 829 544 1380;1381;1382 1001;1002 1002 2 583930 317160 AEVVSLLLDR TNRNTALTLACFQGRAEVVSLLLDRKANVE CFQGRAEVVSLLLDRKANVEHRAKTGLTPL R A E D R K 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 10 0 1113.6394 Q8IWZ3 Q8IWZ3 1237 1246 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 0.0028399 114.51 By MS/MS 2.5 1.12 1 1 1 1 4 396660 396660 0 532 1868 545 1383;1384;1385;1386 1003;1004;1005 1005 3 14573 0 AEWLLAVR GVRWAFSCGTWLPSRAEWLLAVRSIQPEEK GTWLPSRAEWLLAVRSIQPEEKERIGQFVF R A E V R S 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 8 0 956.54435 Q9NRN7 Q9NRN7 31 38 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 2 0.0069891 129.68 By MS/MS 7.5 0.5 1 1 2 995920 995920 0 533 2608 546 1387;1388 1006;1007 1007 2 43591 0 AEWQVYK ELPDSKKKIYQDAYRAEWQVYKEEISRFKE KIYQDAYRAEWQVYKEEISRFKEQLTPSQI R A E Y K E 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 7 0 922.45487 Q00059 Q00059 105 111 TFAM Transcription factor A, mitochondrial yes yes 2 0.035712 111.01 By MS/MS 8.5 0.5 1 1 2 801930 801930 0 534 1229 547 1389;1390 1008 1008 1 409290 0 AEWQVYKEEISR ELPDSKKKIYQDAYRAEWQVYKEEISRFKE AYRAEWQVYKEEISRFKEQLTPSQIMSLEK R A E S R F 1 1 0 0 0 1 3 0 0 1 0 1 0 0 0 1 0 1 1 1 0 0 12 1 1536.7573 Q00059 Q00059 105 116 TFAM Transcription factor A, mitochondrial yes yes 2;3 2.0633E-06 187.31 By MS/MS 8.67 0.471 1 2 3 5440900 5440900 0 535 1229 548 1391;1392;1393 1009;1010 1010 2 3047100 0 AEYDLTTR ______________________________ ______________________________ M A E T R I 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 0 0 0 8 0 967.46108 P60228 P60228 2 9 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.010209 97.431 By MS/MS By matching 7.57 1.4 2 2 1 1 1 5 2 3017500 2897100 120440 536 1065 549 1394;1395;1396;1397;1398;1399;1400 1011;1012 1011 2 172880 437970 AEYEGDGIPTVFVAVAGR VTSAHKGPDETLRIKAEYEGDGIPTVFVAV EGDGIPTVFVAVAGRSNGLGPVMSGNTAYP K A E G R S 3 1 0 1 0 0 2 3 0 1 0 0 0 1 1 0 1 0 1 3 0 0 18 0 1849.921 P22234 P22234 314 331 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 3.605E-05 136.99 By MS/MS 7 0 1 1 338500 338500 0 537 656 550 1401 1013 1013 1 6049.1 0 AEYLASIFGTEK ______________________________ ______________________________ M A E E K D 2 0 0 0 0 0 2 1 0 1 1 1 0 1 0 1 1 0 1 0 0 0 12 0 1327.666 P0DN76;Q01081;Q8WU68 P0DN76 2 13 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 2 0.0017755 107.45 By MS/MS 8 0 1 1 149550 149550 0 538 529 551 1402 1014;1015 1015 2 9866 0 AEYLASIFGTEKDK ______________________________ MAEYLASIFGTEKDKVNCSFYFKIGACRHG M A E D K V 2 0 0 1 0 0 2 1 0 1 1 2 0 1 0 1 1 0 1 0 0 0 14 1 1570.7879 P0DN76;Q01081;Q8WU68 P0DN76 2 15 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 2 0.013879 104.24 By MS/MS 8 0 1 1 74382 74382 0 539 529 552 1403 1016;1017 1016 2 4907 0 AFAAGADIK EDPAVGAIVLTGGDKAFAAGADIKEMQNLS LTGGDKAFAAGADIKEMQNLSFQDCYSSKF K A F I K E 4 0 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 9 0 862.45487 P30084 P30084 93 101 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 2 0.0088605 107.29 By MS/MS 7.5 0.5 1 1 2 2647900 2647900 0 540 734 553 1404;1405 1018 1018 1 154430 0 AFADALEVIPMALSENSGMNPIQTMTEVR QEADKCPTLEQYAMRAFADALEVIPMALSE ENSGMNPIQTMTEVRARQVKEMNPALGIDC R A F V R A 4 1 2 1 0 1 3 1 0 2 2 0 3 1 2 2 2 0 0 2 0 0 29 0 3134.5086 P48643 P48643 450 478 CCT5 T-complex protein 1 subunit epsilon yes yes 3 8.6613E-08 87.881 By MS/MS 6 0 2 2 3582000 3582000 0 541 909 554;555 1406;1407 1019;1020 1019 640;641;642 2 27933 0 AFADAMEVIPSTLAENAGLNPISTVTELR EYSRTLSGMESYCVRAFADAMEVIPSTLAE ENAGLNPISTVTELRNRHAQGEKTAGINVR R A F L R N 5 1 2 1 0 0 3 1 0 2 3 0 1 1 2 2 3 0 0 2 0 0 29 0 3029.538 P50991 P50991 453 481 CCT4 T-complex protein 1 subunit delta yes yes 2;4 7.0272E-05 65.287 By MS/MS 6 0 2 2 12222000 12222000 0 542 956 556 1408;1409 1021;1022 1022 712 2 95307 0 AFAETHIK LLMSEDYFTQAMEVKAFAETHIKGFTLNDA TQAMEVKAFAETHIKGFTLNDAANSRLIIT K A F I K G 2 0 0 0 0 0 1 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 8 0 915.48142 P42704 P42704 1091 1098 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.012536 113.41 By MS/MS By matching 3.86 0.833 3 2 2 6 1 43906000 43842000 63588 543 854 557 1410;1411;1412;1413;1414;1415;1416 1023;1024 1024 2 1149600 91135 AFAETYPAASSLPNGDCGRPR ______________________________ PAASSLPNGDCGRPRARPGGNRVTVVLGAQ M A F P R A 4 2 1 1 1 0 1 2 0 0 1 0 0 1 3 2 1 0 1 0 0 0 21 1 2236.0331 P30520 P30520 2 22 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 0.00099611 108.17 By MS/MS 7 0 1 1 1597700 1597700 0 544 742 558 1417 1025 1025 1 28551 0 AFAGPLSPAK SRYGGSPRDPVLTLRAFAGPLSPAKAEDFR VLTLRAFAGPLSPAKAEDFRKLWKTPPREK R A F A K A 3 0 0 0 0 0 0 1 0 0 1 1 0 1 2 1 0 0 0 0 0 0 10 0 957.52837 Q86XL3 Q86XL3 522 531 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.015485 95.502 By MS/MS 4 0 1 1 468160 468160 0 545 1841 559 1418 1026 1026 1 12780 0 AFALEVIK KPENQFAFNGEFKNKAFALEVIKSTHQCWK NGEFKNKAFALEVIKSTHQCWKALLMKKCN K A F I K S 2 0 0 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 889.5273 Q9H2U2 Q9H2U2 262 269 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 2 0.018685 108.46 By MS/MS 8 0 1 1 651230 651230 0 546 2483 560 1419 1027 1027 1 42961 0 AFATAFLSSEPR VIFMALDLASLASVRAFATAFLSSEPRLDI SVRAFATAFLSSEPRLDILIHNAGISSCGR R A F P R L 3 1 0 0 0 0 1 0 0 0 1 0 0 2 1 2 1 0 0 0 0 0 12 0 1295.651 Q6UX07 Q6UX07 104 115 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 4.8773E-11 204.34 By MS/MS 7 0 1 1 1246800 1246800 0 547 1732 561 1420 1028 1028 1 22280 0 AFAVGVQQVLLK NVSKEYNEFAEVFLKAFAVGVQQVLLKVLY FLKAFAVGVQQVLLKVLYQYKEKQYMAPRV K A F L K V 2 0 0 0 0 2 0 1 0 0 2 1 0 1 0 0 0 0 0 3 0 0 12 0 1271.7602 O95373 O95373 295 306 IPO7 Importin-7 yes yes 2 7.6346E-11 198.65 By MS/MS 4 0 1 1 1229900 1229900 0 548 388 562 1421 1029 1029 1 33575 0 AFCAGGDIR DPETFLIIIKGAGGKAFCAGGDIRVISEAE KGAGGKAFCAGGDIRVISEAEKAKQKIAPV K A F I R V 2 1 0 1 1 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 9 0 965.4389 Q6NVY1 Q6NVY1 93 101 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 0.0096518 105.57 By MS/MS 7 0 1 1 2134100 2134100 0 549 1693 563 1422 1030 1030 1 38137 0 AFCDQQLLTVAK LSNQGLPIGLQFIGRAFCDQQLLTVAKWFE IGRAFCDQQLLTVAKWFEKQVQFPVIQLQE R A F A K W 2 0 0 1 1 2 0 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1392.7071 Q9H0R6 Q9H0R6 481 492 QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 2 7.6965E-11 201.09 By MS/MS 6.5 0.5 1 1 2 10400000 10400000 0 550 2456 564 1423;1424 1031 1031 1 90451 0 AFDDVPVVQIYSSR AKEGAGAVDEEDFIKAFDDVPVVQIYSSRD KAFDDVPVVQIYSSRDLEESINKIREILSD K A F S R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 3 0 0 14 0 1594.7991 Q7Z460 Q7Z460 305 318 CLASP1 CLIP-associating protein 1 yes yes 2 0.0011517 120.59 By MS/MS 3 0 1 1 316400 316400 0 551 1790 565 1425 1032 1032 1 8259.7 0 AFDLFNPNFK RIRAKFYSVYGSGQRAFDLFNPNFKSTCQR GSGQRAFDLFNPNFKSTCQRFVEKYTELQK R A F F K S 1 0 2 1 0 0 0 0 0 0 1 1 0 3 1 0 0 0 0 0 0 0 10 0 1211.5975 Q9Y3D9 Q9Y3D9 84 93 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00067206 138.06 By MS/MS 9 0.816 1 1 1 3 5302400 5302400 0 552 2935 566 1426;1427;1428 1033 1033 1 3029900 0 AFDLIVDR RRTPVQPNPIVYMMKAFDLIVDRPVTLVRE PIVYMMKAFDLIVDRPVTLVREFIERQHAK K A F D R P 1 1 0 2 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 8 0 947.50763 O96000 O96000 30 37 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 0.013709 114.89 By MS/MS 9 0 1 1 295820 295820 0 553 417 567 1429 1034 1034 1 169780 0 AFDLIVDRPVTLVR RRTPVQPNPIVYMMKAFDLIVDRPVTLVRE KAFDLIVDRPVTLVREFIERQHAKNRYYYY K A F V R E 1 2 0 2 0 0 0 0 0 1 2 0 0 1 1 0 1 0 0 3 0 0 14 1 1612.9301 O96000 O96000 30 43 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.020565 71.558 By MS/MS 9 0 1 1 323380 323380 0 554 417 568 1430 1035 1035 1 185590 0 AFDSGIIPMEFVNK RFGGALDAAAKMFSKAFDSGIIPMEFVNKM KAFDSGIIPMEFVNKMKKEGKLIMGIGHRV K A F N K M 1 0 1 1 0 0 1 1 0 2 0 1 1 2 1 1 0 0 0 1 0 0 14 0 1566.7752 P53396 P53396 949 962 ACLY ATP-citrate synthase yes yes 2 1.7731E-05 161.93 By MS/MS By matching 4.2 2.04 1 1 2 2 2 1 1 8 2 22727000 22611000 116660 555 1001 569;570 1431;1432;1433;1434;1435;1436;1437;1438;1439;1440 1036;1037;1038;1039;1040;1041 1040 754 6 637520 145410 AFDTAGNGYCR QFLRLGMLSPEGTCKAFDTAGNGYCRSEGV GTCKAFDTAGNGYCRSEGVVAVLLTKKSLA K A F C R S 2 1 1 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 11 0 1230.5088 P49327 P49327 214 224 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.9026E-16 214.96 By MS/MS 3 1.41 1 1 1 1 1 5 5400300 5400300 0 556 915 571 1441;1442;1443;1444;1445 1042;1043;1044 1044 3 205480 0 AFEAVDKAYK VHPDKNQDDADRAQKAFEAVDKAYKLLLDQ DRAQKAFEAVDKAYKLLLDQEQKKRALDVI K A F Y K L 3 0 0 1 0 0 1 0 0 0 0 2 0 1 0 0 0 0 1 1 0 0 10 1 1140.5815 O75937 O75937 99 108 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 2 0.0011803 158.87 By MS/MS By matching 7.5 0.5 1 1 1 1 482530 469510 13017 557 339 572 1446;1447 1045 1045 1 30973 53439 AFENLLGQALTK AQSNPYYNGPHLNLKAFENLLGQALTKALE NLKAFENLLGQALTKALEDSSFLKRSGRDS K A F T K A 2 0 1 0 0 1 1 1 0 0 3 1 0 1 0 0 1 0 0 0 0 0 12 0 1303.7136 Q8WWI1 Q8WWI1 195 206 LMO7 LIM domain only protein 7 yes yes 2 1.081E-05 166.11 By MS/MS 3 0 1 1 0 0 0 558 2039 573 1448 1046 1046 1 0 0 AFEPYLEILEVYSTK ______________________________ AFEPYLEILEVYSTKAKNYVNGHCTKYEPW K A F T K A 1 0 0 0 0 0 3 0 0 1 2 1 0 1 1 1 1 0 2 1 0 0 15 0 1800.9186 O95470 O95470 11 25 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2;3 0.00031275 129.71 By MS/MS 6 0 2 2 832150 832150 0 559 395 574 1449;1450 1047;1048 1047 2 6489.1 0 AFFAGSQR RQRSGGMERPFVLARAFFAGSQRFGAVWTG RPFVLARAFFAGSQRFGAVWTGDNTAEWDH R A F Q R F 2 1 0 0 0 1 0 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 882.4348 Q14697 Q14697 603 610 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0080258 125.81 By MS/MS 4.5 0.5 1 1 2 3292100 3292100 0 560 1443 575 1451;1452 1049 1049 1 95994 0 AFFPCFDTPAVK KKPFVYTQGQAVLNRAFFPCFDTPAVKYKY LNRAFFPCFDTPAVKYKYSALIEVPDGFTA R A F V K Y 2 0 0 1 1 0 0 0 0 0 0 1 0 3 2 0 1 0 0 1 0 0 12 0 1398.6642 Q9H4A4 Q9H4A4 177 188 RNPEP Aminopeptidase B yes yes 2 0.0049916 106.2 By MS/MS 5 0 1 1 1151500 1151500 0 561 2497 576 1453 1050 1050 1 47330 0 AFFSEVER RDPSKQYGLKMKTSRAFFSEVERRFDAMPF LKMKTSRAFFSEVERRFDAMPFTLRAFEDE R A F E R R 1 1 0 0 0 0 2 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 8 0 983.47125 Q9UQ80 Q9UQ80 264 271 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.0035808 145.63 By MS/MS 7 0 1 1 3530000 3530000 0 562 2859 577 1454 1051 1051 1 63082 0 AFGPGLQGGSAGSPAR FPLEAVAPTKPSKVKAFGPGLQGGSAGSPA FGPGLQGGSAGSPARFTIDTKGAGTGGLGL K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 P21333 P21333 1072 1087 FLNA Filamin-A yes yes 2 2.4298E-07 159.66 By MS/MS 2.5 1.12 1 1 1 1 4 7589300 7589300 0 563 648 578 1455;1456;1457;1458 1052;1053 1053 2 321200 0 AFGSTIVINPEK GGVQVLLQQWIEYIKAFGSTIVINPEKDKT YIKAFGSTIVINPEKDKTMVQELLDFKDKV K A F E K D 1 0 1 0 0 0 1 1 0 2 0 1 0 1 1 1 1 0 0 1 0 0 12 0 1274.6871 Q13620 Q13620 500 511 CUL4B Cullin-4B yes yes 2 8.4031E-05 183.33 By MS/MS 6 1.41 1 1 1 1 1 5 6119400 6119400 0 564 1390 579 1459;1460;1461;1462;1463 1054 1054 1 130640 0 AFGVGER YSGDSSMSPLPSQSRAFGVGERDPCDFIGP SPLPSQSRAFGVGERDPCDFIGPYSMNPST R A F E R D 1 1 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 7 0 734.37114 Q5TGY3 Q5TGY3 1332 1338 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 1 0.0099328 127.66 By MS/MS 6 0 1 1 1512000 1512000 0 565 1641 580 1464 1055 1055 1 11791 0 AFGYYGPLR VGNLGNNGNKTELERAFGYYGPLRSVWVAR KTELERAFGYYGPLRSVWVARNPPGFAFVE R A F L R S 1 1 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 2 0 0 0 9 0 1042.5236 P84103 P84103 29 37 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 2 0.002652 122.79 By MS/MS 8.5 0.5 1 1 2 681260 681260 0 566 1219 581 1465;1466 1056 1056 1 323510 0 AFHNEAQVNPER VNAAQDSTDLVAKLRAFHNEAQVNPERKNL KLRAFHNEAQVNPERKNLKWIGLDLSNGKP R A F E R K 2 1 2 0 0 1 2 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 12 0 1410.664 P17987 P17987 469 480 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 2.7358E-05 199.82 By MS/MS By matching 5.67 2.8 2 2 2 1 2 3 3 2 2 2 20 1 65809000 65792000 17370 567 619 582 1467;1468;1469;1470;1471;1472;1473;1474;1475;1476;1477;1478;1479;1480;1481;1482;1483;1484;1485;1486;1487 1057;1058;1059;1060;1061;1062;1063;1064;1065 1064 9 1392700 53271 AFHNEAQVNPERK VNAAQDSTDLVAKLRAFHNEAQVNPERKNL LRAFHNEAQVNPERKNLKWIGLDLSNGKPR R A F R K N 2 1 2 0 0 1 2 0 1 0 0 1 0 1 1 0 0 0 0 1 0 0 13 1 1538.759 P17987 P17987 469 481 TCP1 T-complex protein 1 subunit alpha yes yes 2;3;4 0.0001411 163.45 By MS/MS By matching 6.09 2.76 3 1 1 2 5 3 3 3 2 21 2 187400000 187320000 82678 568 619 583 1488;1489;1490;1491;1492;1493;1494;1495;1496;1497;1498;1499;1500;1501;1502;1503;1504;1505;1506;1507;1508;1509;1510 1066;1067;1068;1069;1070;1071;1072;1073;1074 1072 9 2589600 253570 AFHPDLEFVGK VIGHYAGEDATDAFRAFHPDLEFVGKFLKP DAFRAFHPDLEFVGKFLKPLLIGELAPEEP R A F G K F 1 0 0 1 0 0 1 1 1 0 1 1 0 2 1 0 0 0 0 1 0 0 11 0 1258.6346 O95864 O95864 74 84 FADS2 Fatty acid desaturase 2 yes yes 3 0.0027359 128.03 By MS/MS 1 0 1 1 160290 160290 0 569 411 584 1511 1075 1075 1 7831.5 0 AFIITGQTYTR EQLDKMVTEKAGFKRAFIITGQTYTRKVDI GFKRAFIITGQTYTRKVDIEVLSVLASLGA R A F T R K 1 1 0 0 0 1 0 1 0 2 0 0 0 1 0 0 3 0 1 0 0 0 11 0 1269.6717 P30566 P30566 235 245 ADSL Adenylosuccinate lyase yes yes 2 5.6218E-11 231.38 By MS/MS 6 0 1 1 2903500 2903500 0 570 744 585 1512 1076 1076 1 22641 0 AFIPAIDSFGFETDLR TQDAPIPGSPLYTIKAFIPAIDSFGFETDL FIPAIDSFGFETDLRTHTQGQAFSLSVFHH K A F L R T 2 1 0 2 0 0 1 1 0 2 1 0 0 3 1 1 1 0 0 0 0 0 16 0 1797.8938 Q15029 Q15029 873 888 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 8.5633E-06 141.37 By MS/MS 6 0 1 1 491990 491990 0 571 1466 586 1513 1077 1077 1 3836.5 0 AFITNIPFDVK GNRFEPYANPTKRYRAFITNIPFDVKWQSL KRYRAFITNIPFDVKWQSLKDLVKEKVGEV R A F V K W 1 0 1 1 0 0 0 0 0 2 0 1 0 2 1 0 1 0 0 1 0 0 11 0 1263.6863 P52272 P52272 73 83 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.00011812 159.09 By MS/MS 5 0.816 1 1 1 3 3012500 3012500 0 572 982 587 1514;1515;1516 1078 1078 1 106440 0 AFKDEYMVNLVR YWRSCAMMMGCVIERAFKDEYMVNLVRAPE IERAFKDEYMVNLVRAPEVPVISGAFCYDV R A F V R A 1 1 1 1 0 0 1 0 0 0 1 1 1 1 0 0 0 0 1 2 0 0 12 1 1483.7493 Q9NYK5 Q9NYK5 157 168 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 3 0.0045726 96.64 By MS/MS 7.5 0.5 1 1 2 2042100 2042100 0 573 2696 588 1517;1518 1079 1079 1577 1 126380 0 AFKDTGK ______________________________ ______________________________ M A F G K T 1 0 0 1 0 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 0 0 7 1 765.4021 P60866 P60866 2 8 RPS20 40S ribosomal protein S20 yes yes 2 0.029662 152.47 By MS/MS 10 0 1 1 1669000 1669000 0 574 1075 589 1519 1080 1080 1 1774000 0 AFKDTGKTPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK M A F H R I 2 1 0 1 0 0 2 1 1 1 0 2 0 1 2 0 2 0 0 2 0 0 18 2 1994.0585 P60866 P60866 2 19 RPS20 40S ribosomal protein S20 yes yes 3;4 0.00081164 105.02 By MS/MS 10 0 2 2 3181100 3181100 0 575 1075 590 1520;1521 1081;1082 1081 2 3381200 0 AFLASGPYLTHQQK ______________________________ MAFLASGPYLTHQQKVLRLYKRALRHLESW M A F Q K V 2 0 0 0 0 2 0 1 1 0 2 1 0 1 1 1 1 0 1 0 0 0 14 0 1559.8096 Q9Y6M9 Q9Y6M9 2 15 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 2 0.00023301 146.16 By MS/MS 9.5 0.5 1 1 2 3480100 3480100 0 576 3010 591 1522;1523 1083;1084 1083 2 1997300 0 AFLDALQNQAEASSK ELVSNLGTIARSGSKAFLDALQNQAEASSK AFLDALQNQAEASSKIIGQFGVGFYSAFMV K A F S K I 4 0 1 1 0 2 1 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 15 0 1591.7842 Q12931 Q12931 182 196 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 8.7356E-50 277.82 By MS/MS 7 1.41 1 1 1 1 1 5 27212000 27212000 0 577 1316 592 1524;1525;1526;1527;1528 1085;1086;1087 1085 3 1344700 0 AFLDNPTIILAHIR ______________________________ MAFLDNPTIILAHIRQSHVTSDDTGMCEMV M A F I R Q 2 1 1 1 0 0 0 0 1 3 2 0 0 1 1 0 1 0 0 0 0 0 14 0 1592.9039 Q9BPZ7 Q9BPZ7 2 15 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 yes yes 2 0.00019434 132.56 By MS/MS 6 0 1 1 187610 187610 0 578 2304 593 1529 1088 1088 1 1463 0 AFLDSLPDVK HIYDNRIVLNGIDLKAFLDSLPDVKIVKMK GIDLKAFLDSLPDVKIVKMKCPDGGDNADS K A F V K I 1 0 0 2 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 1 0 0 10 0 1103.5863 O15294 O15294 743 752 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.00072278 135.71 By MS/MS 4 0 1 1 745750 745750 0 579 167 594 1530 1089 1089 1 20358 0 AFLEENNLDYIIR SKRGVSCQFGPDVTKAFLEENNLDYIIRSH TKAFLEENNLDYIIRSHEVKAEGYEVAHGG K A F I R S 1 1 2 1 0 0 2 0 0 2 2 0 0 1 0 0 0 0 1 0 0 0 13 0 1608.8148 P53041 P53041 413 425 PPP5C Serine/threonine-protein phosphatase 5 yes yes 2 4.3336E-05 160.91 By MS/MS 6 0 1 1 2168300 2168300 0 580 997 595 1531 1090 1090 1 16909 0 AFLFVNK GEPAEIKIIREAYKKAFLFVNKGLNTDELG IIREAYKKAFLFVNKGLNTDELGQKEEAKN K A F N K G 1 0 1 0 0 0 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 7 0 837.47487 Q8N0X7 Q8N0X7 23 29 SPG20 Spartin yes yes 2 0.028491 116 By MS/MS 5 0 1 1 499980 499980 0 581 1889 596 1532 1091 1091 1 20551 0 AFLGELK VHPSEMINNAENLFRAFLGELKTQMTSAVR NNAENLFRAFLGELKTQMTSAVREPKLPVL R A F L K T 1 0 0 0 0 0 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 7 0 776.44324 P78527 P78527 199 205 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.030534 114.59 By MS/MS 3 1.41 1 1 1 1 1 5 3300900 3300900 0 582 1197 597 1533;1534;1535;1536;1537 1092 1092 1 145570 0 AFLIEEQK GGSMCAKCVRDRIKRAFLIEEQKIVVKVLK VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA R A F Q K I 1 0 0 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 976.52295 P49207 P49207 94 101 RPL34 60S ribosomal protein L34 yes yes 2 0.0056149 134.81 By MS/MS By matching 9.67 0.471 1 2 2 1 1862500 1806000 56532 583 914 598 1538;1539;1540 1093;1094 1094 2 1692600 1450000 AFLNAIMR GGNIEVLGFNARQRKAFLNAIMRYGMPPQD FNARQRKAFLNAIMRYGMPPQDAFTTQWLV K A F M R Y 2 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 8 0 934.50586 Q14839;Q8TDI0 Q14839 1423 1430 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 0.0013167 157.99 By MS/MS 2 0 1 1 288150 288150 0 584 1449 599 1541 1095 1095 1136 1 14323 0 AFLTLAEDILR RFFETSAKANINIEKAFLTLAEDILRKTPV NIEKAFLTLAEDILRKTPVKEPNSENVDIS K A F L R K 2 1 0 1 0 0 1 0 0 1 3 0 0 1 0 0 1 0 0 0 0 0 11 0 1260.7078 P61026 P61026 162 172 RAB10 Ras-related protein Rab-10 yes yes 2 0.00045316 144.65 By MS/MS 9 0 1 1 65535 65535 0 585 1085 600 1542 1096 1096 1 37611 0 AFNADFH IGAGTSEVRRLVIGRAFNADFH________ VRRLVIGRAFNADFH_______________ R A F F H - 2 0 1 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 7 0 820.3504 P26440 P26440 420 426 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.03532 111.28 By MS/MS 7 0 1 1 789100 789100 0 586 696 601 1543 1097 1097 1 14101 0 AFNFLNEIK IVYLCITDDDFERSRAFNFLNEIKKRFQTT DFERSRAFNFLNEIKKRFQTTYGSRAQTAL R A F I K K 1 0 2 0 0 0 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1094.576 P51809 P51809 75 83 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 0.002157 128.12 By MS/MS 9 0.816 1 1 1 3 613680 613680 0 587 978 602 1544;1545;1546 1098 1098 1 321260 0 AFNSNNEQR FKLLDCLLESHRFAKAFNSNNEQRTALWKA SHRFAKAFNSNNEQRTALWKAGFKGKSKPN K A F Q R T 1 1 3 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1078.4792 Q9Y6D6 Q9Y6D6 1695 1703 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.00071506 148.52 By MS/MS 2 0 1 1 265450 265450 0 588 3003 603 1547 1099 1099 1 13195 0 AFNSNYEQR FKLLDCLQESHSFSKAFNSNYEQRTVLWRA SHSFSKAFNSNYEQRTVLWRAGFKGKSKPN K A F Q R T 1 1 2 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1127.4996 Q9Y6D5 Q9Y6D5 1627 1635 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 1.2916E-06 191.17 By MS/MS 2 0 1 1 365690 365690 0 589 3002 604 1548 1100 1100 1 18177 0 AFNSSSFNSNTFLTR VRMAVQDAVDALMQKAFNSSSFNSNTFLTR AFNSSSFNSNTFLTRLLVHMGLLKSEDKVK K A F T R L 1 1 3 0 0 0 0 0 0 0 1 0 0 3 0 4 2 0 0 0 0 0 15 0 1691.7903 P46060 P46060 501 515 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 2.6784E-63 302.63 By MS/MS 5 0 1 1 1150000 1150000 0 590 876 605 1549 1101 1101 1 47271 0 AFREEFGAEPELAVSAPGR LRQPQVAELLAEARRAFREEFGAEPELAVS EFGAEPELAVSAPGRVNLIGEHTDYNQGLV R A F G R V 4 2 0 0 0 0 4 2 0 0 1 0 0 2 2 1 0 0 0 1 0 0 19 1 2032.0014 P51570 P51570 19 37 GALK1 Galactokinase yes yes 3 0.010582 65.808 By MS/MS 7 0 1 1 1088500 1088500 0 591 967 606 1550 1102 1102 1 19452 0 AFSDPFVEAEK NAKNTVQGFKRFHGRAFSDPFVEAEKSNLA FHGRAFSDPFVEAEKSNLAYDIVQLPTGLT R A F E K S 2 0 0 1 0 0 2 0 0 0 0 1 0 2 1 1 0 0 0 1 0 0 11 0 1238.5819 P34932 P34932 74 84 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 0.0010651 132.78 By MS/MS 4 0 1 1 741990 741990 0 592 778 607 1551 1103 1103 1 20255 0 AFSGYLGTDQSK FAPICNPVLCPWGKKAFSGYLGTDQSKWKA GKKAFSGYLGTDQSKWKAYDATHLVKSYPG K A F S K W 1 0 0 1 0 1 0 2 0 0 1 1 0 1 0 2 1 0 1 0 0 0 12 0 1272.5986 P10768 P10768 187 198 ESD S-formylglutathione hydrolase yes yes 2 4.2984E-11 205.53 By MS/MS 8 0 1 1 5426600 5426600 0 593 543 608 1552 1104 1104 1 357990 0 AFSPTTVNTGR SLFIATNICETIVWKAFSPTTVNTGRGMEF IVWKAFSPTTVNTGRGMEFEGAIIALFHLL K A F G R G 1 1 1 0 0 0 0 1 0 0 0 0 0 1 1 1 3 0 0 1 0 0 11 0 1149.5778 P61619 P61619 195 205 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 2 0.00024037 160.53 By MS/MS 3.8 2.79 1 1 1 1 1 5 2895900 2895900 0 594 1103 609 1553;1554;1555;1556;1557 1105;1106;1107;1108 1106 4 116250 0 AFSVFLFNTENK NCHLNENIEKGLLHRAFSVFLFNTENKLLL LHRAFSVFLFNTENKLLLQQRSDAKITFPG R A F N K L 1 0 2 0 0 0 1 0 0 0 1 1 0 3 0 1 1 0 0 1 0 0 12 0 1415.7085 Q13907 Q13907 53 64 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 2 1.9984E-05 172.56 By MS/MS 8.5 0.5 1 1 2 238620 238620 0 595 1402 610 1558;1559 1109 1109 1 42248 0 AFTGREFDELNPSAQR RRIGIFGQDEDVTSKAFTGREFDELNPSAQ FTGREFDELNPSAQRDACLNARCFARVEPS K A F Q R D 2 2 1 1 0 1 2 1 0 0 1 0 0 2 1 1 1 0 0 0 0 0 16 1 1836.8755 P16615 P16615 651 666 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 4.3262E-05 146.79 By MS/MS 2.78 1.31 2 2 2 2 1 9 12482000 12482000 0 596 608 611 1560;1561;1562;1563;1564;1565;1566;1567;1568 1110;1111;1112;1113;1114 1111 5 411490 0 AFTYINLDK ATEWLEGYLSSLHLKAFTYINLDKAVLGTS SSLHLKAFTYINLDKAVLGTSNFKVSASPL K A F D K A 1 0 1 1 0 0 0 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1083.5601 P02786 P02786 478 486 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.034472 106.68 By MS/MS 4 0 1 1 0 0 0 597 437 612 1569 1115 1115 1 0 0 AFVAGVLPFK INLTERGCVTKIYGRAFVAGVLPFKVAKDM KIYGRAFVAGVLPFKVAKDMAAAAVRCIRK R A F F K V 2 0 0 0 0 0 0 1 0 0 1 1 0 2 1 0 0 0 0 2 0 0 10 0 1047.6117 O00442 O00442 196 205 RTCA RNA 3-terminal phosphate cyclase yes yes 2 0.00082363 131.04 By MS/MS 7.5 0.5 1 1 2 604920 604920 0 598 95 613 1570;1571 1116 1116 1 15612 0 AFVDFLSDEIK ACGCGCGSLHTDGDKAFVDFLSDEIKEERK DGDKAFVDFLSDEIKEERKIQKHKTLPKMS K A F I K E 1 0 0 2 0 0 1 0 0 1 1 1 0 2 0 1 0 0 0 1 0 0 11 0 1282.6445 Q07021 Q07021 81 91 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2 4.8493E-16 220.39 By MS/MS 8 0.816 1 1 1 3 1917500 1917500 0 599 1279 614 1572;1573;1574 1117 1117 1 150100 0 AFVDFLSDEIKEER ACGCGCGSLHTDGDKAFVDFLSDEIKEERK KAFVDFLSDEIKEERKIQKHKTLPKMSGGW K A F E R K 1 1 0 2 0 0 3 0 0 1 1 1 0 2 0 1 0 0 0 1 0 0 14 1 1696.8308 Q07021 Q07021 81 94 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2 1.747E-11 207.95 By MS/MS 8 0 1 1 1377300 1377300 0 600 1279 615 1575 1118 1118 1 90859 0 AFVDFNEGEIK LLKFDQLNIQRTQKKAFVDFNEGEIKFIPT TQKKAFVDFNEGEIKFIPTYKYDSKTDRWD K A F I K F 1 0 1 1 0 0 2 1 0 1 0 1 0 2 0 0 0 0 0 1 0 0 11 0 1267.6085 Q01968 Q01968 462 472 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.00099233 133.75 By MS/MS 2.5 1.5 1 1 2 811820 811820 0 601 1248 616 1576;1577 1119;1120 1120 2 22162 0 AFVEATFQR PPQGCASTPVARELKAFVEATFQRQFVLTL VARELKAFVEATFQRQFVLTLSELKRLFNL K A F Q R Q 2 1 0 0 0 1 1 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 9 0 1067.54 Q9NVU0 Q9NVU0 564 572 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.030661 90.709 By MS/MS 5 0 1 1 708320 708320 0 602 2661 617 1578 1121 1121 1 29115 0 AFVGFEYEDSR AVVMGRGRRRDDIARAFVGFEYEDSRGRRF DIARAFVGFEYEDSRGRRFMCSGPDKVMKV R A F S R G 1 1 0 1 0 0 2 1 0 0 0 0 0 2 0 1 0 0 1 1 0 0 11 0 1318.583 Q8ND04 Q8ND04 845 855 SMG8 Protein SMG8 yes yes 2 0.014499 94.309 By MS/MS 3.5 0.5 1 1 2 696880 696880 0 603 1956 618 1579;1580 1122 1122 1 18930 0 AFVHWYVGEGMEEGEFSEAR WARLDHKFDLMYAKRAFVHWYVGEGMEEGE YVGEGMEEGEFSEAREDMAALEKDYEEVGV R A F A R E 2 1 0 0 0 0 5 3 1 0 0 0 1 2 0 1 0 1 1 2 0 0 20 0 2329.011 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;P68366 P68363 403 422 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 3 2.6325E-05 124.99 By MS/MS 6 0 1 1 5189000 5189000 0 604 1185;1754;2314;1186 619 1581 1123 1123 925 1 40464 0 AFVSMVYSEEGAEDR DLIHGAPVGKPAANRAFVSMVYSEEGAEDR AFVSMVYSEEGAEDRTFARVIVGGSSEYKI R A F D R T 2 1 0 1 0 0 3 1 0 0 0 0 1 1 0 2 0 0 1 2 0 0 15 0 1688.7352 Q14683 Q14683 78 92 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 8.6226E-15 210.44 By MS/MS 3 0 2 2 1664100 1664100 0 605 1440 620;621 1582;1583 1124;1125 1125 1130 2 43441 0 AFYGDTLVTGFAR VIARIVDGSRFTEFKAFYGDTLVTGFARIF FKAFYGDTLVTGFARIFGYPVGIVGNNGVL K A F A R I 2 1 0 1 0 0 0 2 0 0 1 0 0 2 0 0 2 0 1 1 0 0 13 0 1416.7038 Q9HCC0 Q9HCC0 349 361 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 1.0744E-11 201.75 By MS/MS 5.5 0.5 1 1 2 13022000 13022000 0 606 2559 622 1584;1585 1126;1127 1126 2 103450 0 AFYLEAR EPFEVRTRLLGWDDRAFYLEARFVSLRDGF RLLGWDDRAFYLEARFVSLRDGFVCALLRF R A F A R F 2 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 7 0 868.4443 Q8WUY1 Q8WUY1 130 136 THEM6 Protein THEM6 yes yes 2 0.040889 107.43 By MS/MS 9 0 1 1 500180 500180 0 607 2020 623 1586 1128 1128 1 287060 0 AFYPEEISSMVLTK GDKPKVQVSYKGETKAFYPEEISSMVLTKM KAFYPEEISSMVLTKMKEIAEAYLGYPVTN K A F T K M 1 0 0 0 0 0 2 0 0 1 1 1 1 1 1 2 1 0 1 1 0 0 14 0 1613.8011 P0DMV9;P0DMV8 P0DMV9 113 126 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 8.4488E-05 146.36 By MS/MS 5 0 3 3 4278600 4278600 0 608 528 624;625 1587;1588;1589 1129;1130;1131;1132;1133 1131 316 5 175870 0 AGAAFFNEVR ATMATAVLIGYGVSRAGAAFFNEVRNAVFG YGVSRAGAAFFNEVRNAVFGKVAQNSIRRI R A G V R N 3 1 1 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 10 0 1080.5352 O75027 O75027 201 210 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.00045592 146.69 By MS/MS 2 0.816 1 1 1 3 1581200 1581200 0 609 276 626 1590;1591;1592 1134;1135 1134 2 71382 0 AGAAPTTAFGQAVIGPPGSGK ______________________________ TAFGQAVIGPPGSGKTTYCLGMSEFLRALG M A G G K T 5 0 0 0 0 1 0 5 0 1 0 1 0 1 3 1 2 0 0 1 0 0 21 0 1853.9636 Q9H9Y4 Q9H9Y4 2 22 GPN2 GPN-loop GTPase 2 yes yes 2 0.00017712 103.77 By MS/MS 8 0 1 1 1049700 1049700 0 610 2539 627 1593 1136 1136 1 69248 0 AGAAPVAPEK EKLCRANSRDGEAGRAGAAPVAPEKQATEL GEAGRAGAAPVAPEKQATELALLQRQHALL R A G E K Q 4 0 0 0 0 0 1 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 10 0 909.49198 Q92974 Q92974 790 799 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.018221 93.598 By MS/MS 4 0 1 1 514630 514630 0 611 2094 628 1594 1137 1137 1 14049 0 AGAAPVAPEKQATELALLQR EKLCRANSRDGEAGRAGAAPVAPEKQATEL VAPEKQATELALLQRQHALLQEELRRCRRL R A G Q R Q 6 1 0 0 0 2 2 1 0 0 3 1 0 0 2 0 1 0 0 1 0 0 20 1 2033.1269 Q92974 Q92974 790 809 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 3 0.00069914 96.773 By MS/MS 4 0 1 1 969980 969980 0 612 2094 629 1595 1138 1138 1 26479 0 AGAATQASLESAPR ______________________________ MAGAATQASLESAPRIMRLVAECSRSRARA M A G P R I 5 1 0 0 0 1 1 1 0 0 1 0 0 0 1 2 1 0 0 0 0 0 14 0 1328.6684 Q9BXR0 Q9BXR0 2 15 QTRT1 Queuine tRNA-ribosyltransferase yes yes 2 6.7049E-05 138.99 By MS/MS 7 0 1 1 1064700 1064700 0 613 2403 630 1596 1139 1139 1 19026 0 AGACVTSESTVVR LCSEAMFHLGVPTTRAGACVTSESTVVRDV TRAGACVTSESTVVRDVFYDGNPKYEQCTV R A G V R D 2 1 0 0 1 0 1 1 0 0 0 0 0 0 0 2 2 0 0 3 0 0 13 0 1335.6453 Q9BVL4 Q9BVL4 216 228 SELO Selenoprotein O yes yes 2 0.0018793 139.43 By MS/MS 5 0 1 1 817370 817370 0 614 2380 631 1597 1140 1140 1 33597 0 AGADEERAETAR ______________________________ IFKAGADEERAETARLTSFIGAIAIGDLVK K A G A R L 4 2 0 1 0 0 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 12 1 1274.5851 P78371 P78371 14 25 CCT2 T-complex protein 1 subunit beta yes yes 2;3 9.1262E-05 176.6 By MS/MS By MS/MS 6 0 4 2 2 207820000 207680000 142210 615 1195 632 1598;1599;1600;1601 1141;1142;1143 1142 3 1619500 436130 AGAEREFR PLDFARTRLAADVGKAGAEREFRGLGDCLV LAADVGKAGAEREFRGLGDCLVKIYKSDGI K A G F R G 2 2 0 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 8 1 934.46208 P05141 P05141 148 155 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3 0.031785 87.323 By MS/MS 8.5 1.12 1 1 1 1 4 42266000 42266000 0 616 469 633 1602;1603;1604;1605 1144 1144 1 4462200 0 AGAFDQLK RKGWKTCLICADTFRAGAFDQLKQNATKAR ICADTFRAGAFDQLKQNATKARIPFYGSYT R A G L K Q 2 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 848.43922 P61011 P61011 142 149 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.022336 103.74 By MS/MS 5.5 0.5 1 1 2 3203500 3203500 0 617 1082 634 1606;1607 1145 1145 1 39490 0 AGAGDASGTR AATAAAKGNGGGGGRAGAGDASGTRKKKGP GGGGRAGAGDASGTRKKKGPGPLATAYLVI R A G T R K 3 1 0 1 0 0 0 3 0 0 0 0 0 0 0 1 1 0 0 0 0 0 10 0 861.39406 Q6Y1H2 Q6Y1H2 20 29 HACD2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 2 0.014721 96.034 By MS/MS 1.5 0.5 1 1 2 59058 59058 0 618 1735 635 1608;1609 1146 1146 1 2908.5 0 AGAGPSPAGDDVTFPEFLR EYQQRYGAEIVRRYRAGAGPSPAGDDVTFP PSPAGDDVTFPEFLRYLVDEDPERMNEHWM R A G L R Y 3 1 0 2 0 0 1 3 0 0 1 0 0 2 3 1 1 0 0 1 0 0 19 0 1902.9112 Q8NCH0 Q8NCH0 247 265 CHST14 Carbohydrate sulfotransferase 14 yes yes 2 2.5429E-07 143.94 By MS/MS 7 0 1 1 450890 450890 0 619 1953 636 1610 1147 1147 1 8057.4 0 AGAGSAAVSGAGTPVAGPTGR ______________________________ AVSGAGTPVAGPTGRDLFAEGLLEFLRPAV M A G G R D 6 1 0 0 0 0 0 6 0 0 0 0 0 0 2 2 2 0 0 2 0 0 21 0 1710.8649 O95295 O95295 2 22 SNAPIN SNARE-associated protein Snapin yes yes 2 6.3555E-32 220.21 By MS/MS 10 0 1 1 2326700 2326700 0 620 382 637 1611 1148 1148 1 2473000 0 AGAGSATLSMAYAGAR TGRIQEAGTEVVKAKAGAGSATLSMAYAGA GAGSATLSMAYAGARFVFSLVDAMNGKEGV K A G A R F 6 1 0 0 0 0 0 3 0 0 1 0 1 0 0 2 1 0 1 0 0 0 16 0 1453.6984 P40926 P40926 242 257 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 9.8991E-11 190.66 By MS/MS By matching 8.6 0.8 3 1 1 4 1 3216300 3163000 53253 621 832 638;639 1612;1613;1614;1615;1616 1149;1150 1149 578 2 457260 454310 AGAHLQGGAK EYVVESTGVFTTMEKAGAHLQGGAKRVIIS TTMEKAGAHLQGGAKRVIISAPSADAPMFV K A G A K R 3 0 0 0 0 1 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 10 0 908.48281 P04406 P04406 108 117 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2;3 2.2577E-05 172.25 By MS/MS By MS/MS 6.54 2.47 1 1 1 2 3 2 2 1 7 6 32869000 32740000 128950 622 452 640 1617;1618;1619;1620;1621;1622;1623;1624;1625;1626;1627;1628;1629 1151;1152;1153;1154;1155;1156 1153 6 1198500 331480 AGAHLQGGAKR EYVVESTGVFTTMEKAGAHLQGGAKRVIIS TMEKAGAHLQGGAKRVIISAPSADAPMFVM K A G K R V 3 1 0 0 0 1 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1064.5839 P04406 P04406 108 118 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.0075149 121.05 By MS/MS 7 0 1 1 336520 336520 0 623 452 641 1630 1157 1157 1 6013.6 0 AGAIAPCEVTVPAQNTGLGPEK IRDMLLANKVPAAARAGAIAPCEVTVPAQN EVTVPAQNTGLGPEKTSFFQALGITTKISR R A G E K T 4 0 1 0 1 1 2 3 0 1 1 1 0 0 3 0 2 0 0 2 0 0 22 0 2179.0943 Q8NHW5;P05388 Q8NHW5 113 134 RPLP0P6;RPLP0 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2;3 1.0921E-06 130.47 By MS/MS 7.67 0.471 1 2 3 3475800 3475800 0 624 473 642 1631;1632;1633 1158;1159 1158 2 208390 0 AGAKPDQIGIITPYEGQR TEAANVEKITTKLLKAGAKPDQIGIITPYE KPDQIGIITPYEGQRSYLVQYMQFSGSLHT K A G Q R S 2 1 0 1 0 2 1 3 0 3 0 1 0 0 2 0 1 0 1 0 0 0 18 1 1913.0007 Q92900 Q92900 794 811 UPF1 Regulator of nonsense transcripts 1 yes yes 3 0.012479 69.935 By MS/MS 3 0 1 1 1524000 1524000 0 625 2088 643 1634 1160 1160 1 39783 0 AGALCLSR HEVEVTVPDTITEWKAGALCLSRDTGLGLS DTITEWKAGALCLSRDTGLGLSPTASLRVF K A G S R D 2 1 0 0 1 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 846.43817 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 772 779 yes yes 2 0.0090135 122.13 By MS/MS 9 0 1 1 139240 139240 0 + 626 30 644 1635 1161 1161 1 79911 0 AGALQCSPSDAYTK RVQELGHGCAALVTKAGALQCSPSDAYTKK KAGALQCSPSDAYTKKELIECARRVSEKVS K A G T K K 3 0 0 1 1 1 0 1 0 0 1 1 0 0 1 2 1 0 1 0 0 0 14 0 1467.6664 Q9Y490 Q9Y490 1934 1947 TLN1 Talin-1 yes yes 2 2.167E-08 191.33 By MS/MS 2 0 1 1 456890 456890 0 627 2947 645 1636 1162 1162 1 22710 0 AGALQCSPSDAYTKK RVQELGHGCAALVTKAGALQCSPSDAYTKK AGALQCSPSDAYTKKELIECARRVSEKVSH K A G K K E 3 0 0 1 1 1 0 1 0 0 1 2 0 0 1 2 1 0 1 0 0 0 15 1 1595.7614 Q9Y490 Q9Y490 1934 1948 TLN1 Talin-1 yes yes 3 0.030102 80.719 By MS/MS 2 0 1 1 502780 502780 0 628 2947 646 1637 1163 1163 1 24991 0 AGALVRK ______________________________ ______________________________ M A G R K A 2 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 1 713.45481 Q9Y5U8 Q9Y5U8 2 8 MPC1 Mitochondrial pyruvate carrier 1 yes yes 2 0.044145 107.55 By MS/MS 10 0 1 1 431880 431880 0 629 2981 647 1638 1164 1164 0 459050 0 AGATSEGVLANFFNSLLSK SPIPAGSKKIDPNMKAGATSEGVLANFFNS SEGVLANFFNSLLSKKTGSPGGPGVSGGSP K A G S K K 3 0 2 0 0 0 1 2 0 0 3 1 0 2 0 3 1 0 0 1 0 0 19 0 1924.9894 Q9Y6G9 Q9Y6G9 436 454 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 0.01952 69.258 By MS/MS 6 0 1 1 54319 54319 0 630 3005 648 1639 1165 1165 1 423.58 0 AGAVSALAK RFIYNRVVLEHEEVRAGAVSALAKFGAQNE EHEEVRAGAVSALAKFGAQNEEMLPSILVL R A G A K F 4 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 786.45995 Q9Y678 Q9Y678 489 497 COPG1 Coatomer subunit gamma-1 yes yes 2 0.00016052 166.68 By MS/MS 4.5 0.5 1 1 2 3304100 3304100 0 631 2996 649 1640;1641 1166 1166 1 99725 0 AGAYDFPSPEWDTVTPEAK PFWDEDQHRLYQQIKAGAYDFPSPEWDTVT DFPSPEWDTVTPEAKDLINKMLTINPAKRI K A G A K D 3 0 0 2 0 0 2 1 0 0 0 1 0 1 3 1 2 1 1 1 0 0 19 0 2079.9426 Q13557;Q9UQM7;Q13555;Q13554 Q13557 228 246 CAMK2D;CAMK2A;CAMK2G;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 2 1.1435E-07 151.66 By MS/MS 6.5 0.5 1 1 2 3220500 3220500 0 632 1381 650 1642;1643 1167 1167 1 28384 0 AGCALSAESSR GSRASISQGPPTASRAGCALSAESSRTLLA TASRAGCALSAESSRTLLACVLWVLKNTEP R A G S R T 3 1 0 0 1 0 1 1 0 0 1 0 0 0 0 3 0 0 0 0 0 0 11 0 1107.4979 Q96HP0 Q96HP0 1241 1251 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0027177 117.31 By MS/MS 2 0.816 1 1 1 3 459840 459840 0 633 2193 651 1644;1645;1646 1168 1168 1 21616 0 AGCAVTSLLASELTK AAFRRKRGPRQANRKAGCAVTSLLASELTK AGCAVTSLLASELTKDDAMAAVPAKVSKNS K A G T K D 3 0 0 0 1 0 1 1 0 0 3 1 0 0 0 2 2 0 0 1 0 0 15 0 1519.7916 O60610 O60610 1225 1239 DIAPH1 Protein diaphanous homolog 1 yes yes 2 1.1448E-22 233.13 By MS/MS 3 0 1 1 310680 310680 0 634 255 652 1647 1169 1169 1 8110.3 0 AGDAFGDTSFLNSK SAPLGDFRHTMHVGRAGDAFGDTSFLNSKA RAGDAFGDTSFLNSKAGEPDGESLDEQPSS R A G S K A 2 0 1 2 0 0 0 2 0 0 1 1 0 2 0 2 1 0 0 0 0 0 14 0 1428.6521 Q9H3Q1 Q9H3Q1 43 56 CDC42EP4 Cdc42 effector protein 4 yes yes 2 0.0010599 122.33 By MS/MS 7 0 1 1 602930 602930 0 635 2492 653 1648 1170 1170 1 10774 0 AGDLLLR YFFLFNTFVQKQGIRAGDLLLRHSALRHMI FVQKQGIRAGDLLLRHSALRHMISFLLGAS R A G L R H 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 756.44939 Q9UPU5 Q9UPU5 2299 2305 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.040889 107.43 By MS/MS 2 0 1 1 236300 236300 0 636 2854 654 1649 1171 1171 1 11745 0 AGDMENAENILTVMR VTEAVFSALVTGHARAGDMENAENILTVMR AGDMENAENILTVMRDAGIEPGPDTYLALL R A G M R D 2 1 2 1 0 0 2 1 0 1 1 0 2 0 0 0 1 0 0 1 0 0 15 0 1662.7705 P42704 P42704 245 259 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 9.9433E-64 305.3 By MS/MS By MS/MS 3.69 0.916 9 4 2 1 14 2 29032000 28886000 145720 637 854 655;656;657 1650;1651;1652;1653;1654;1655;1656;1657;1658;1659;1660;1661;1662;1663;1664;1665 1172;1173;1174;1175;1176;1177;1178;1179;1180;1181;1182;1183;1184 1176 604;605 12 758570 208850 AGDRGDRLER RVVQRSSLSRERGEKAGDRGDRLERSERGG ERGEKAGDRGDRLERSERGGDRGDRLDRAR K A G E R S 1 3 0 2 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 2 1143.5745 Q04637 Q04637 1154 1163 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0075681 110.53 By MS/MS 2.62 1.32 2 2 2 1 1 8 9557700 9557700 0 638 1264 658 1666;1667;1668;1669;1670;1671;1672;1673 1185;1186;1187;1188 1185 4 431090 0 AGEDAVWVLDSGSVR AAVGPGAGGAARLYRAGEDAVWVLDSGSVR AGEDAVWVLDSGSVRGATANSSAAWLVQFY R A G V R G 2 1 0 2 0 0 1 2 0 0 1 0 0 0 0 2 0 1 0 3 0 0 15 0 1559.758 Q6ZRP7 Q6ZRP7 58 72 QSOX2 Sulfhydryl oxidase 2 yes yes 2 4.0271E-29 213.38 By MS/MS 4 0 1 1 0 0 0 639 1741 659 1674 1189 1189 1 0 0 AGEEVIAGPERENDVPLVVRPK GAEIEPSAQAKPEKKAGEEVIAGPERENDV GPERENDVPLVVRPKVRTQATTGARPKTET K A G P K V 2 2 1 1 0 0 4 2 0 1 1 1 0 0 3 0 0 0 0 4 0 0 22 2 2373.2652 Q96D09 Q96D09 18 39 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 3 0.0058619 68.168 By MS/MS 4 0 1 1 773780 773780 0 640 2146 660 1675 1190 1190 1 21123 0 AGELTEDEVER AHVVLRKADIDLTKRAGELTEDEVERVITI LTKRAGELTEDEVERVITIMQNPRQYKIPD R A G E R V 1 1 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1246.5677 P62269 P62269 56 66 RPS18 40S ribosomal protein S18 yes yes 2 3.0894E-05 172.27 By MS/MS By MS/MS 9.67 0.471 1 2 2 1 1138800 943360 195440 641 1124 661 1676;1677;1678 1191;1192;1193 1192 3 641040 5012900 AGELTPEEEAQYK ______________________________ ______________________________ M A G Y K K 2 0 0 0 0 1 4 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 13 0 1463.678 Q9NZT1 Q9NZT1 2 14 CALML5 Calmodulin-like protein 5 yes yes 2 0.035055 61.353 By MS/MS 6.33 3.86 1 1 1 3 298020 0 298020 642 2716 662 1679;1680;1681 1194;1195;1196 1195 2 0 3257400 AGELTPEEEAQYKK ______________________________ MAGELTPEEEAQYKKAFSAVDTDGNGTINA M A G K K A 2 0 0 0 0 1 4 1 0 0 1 2 0 0 1 0 1 0 1 0 0 0 14 1 1591.773 Q9NZT1 Q9NZT1 2 15 CALML5 Calmodulin-like protein 5 yes yes 2 0.002584 108.35 By MS/MS By MS/MS 6.36 3.14 2 1 1 1 1 1 2 2 3 8 3852700 618830 3233900 643 2716 663 1682;1683;1684;1685;1686;1687;1688;1689;1690;1691;1692 1197;1198;1199;1200;1201;1202;1203 1201 6 337900 28621000 AGEQLAPFLPQLVPR SRKGAAFGFNVIATRAGEQLAPFLPQLVPR AGEQLAPFLPQLVPRLYRYQFDPNLGIRQA R A G P R L 2 1 0 0 0 2 1 1 0 0 3 0 0 1 3 0 0 0 0 1 0 0 15 0 1634.9144 Q5VYK3 Q5VYK3 1112 1126 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.012944 88.441 By MS/MS 3 0.816 1 1 1 3 309550 309550 0 644 1657 664 1693;1694;1695 1204 1204 1 8973.4 0 AGEVFIHK ITEEEMRKLFEKYGKAGEVFIHKDKGFGFI LFEKYGKAGEVFIHKDKGFGFIRLETRTLA K A G H K D 1 0 0 0 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 1 0 0 8 0 899.4865 Q15233 Q15233 100 107 NONO Non-POU domain-containing octamer-binding protein yes yes 2 0.0069891 129.68 By MS/MS 6 0 1 1 3309000 3309000 0 645 1487 665 1696 1205 1205 1 25803 0 AGFAGDDAPR DIAALVVDNGSGMCKAGFAGDDAPRAVFPS SGMCKAGFAGDDAPRAVFPSIVGRPRHQGV K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261 P60709 19 28 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;POTEJ;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0032492 113.18 By MS/MS By MS/MS 7.62 1.32 2 2 2 1 1 5 3 77214000 74908000 2306400 646 1072;1179 666 1697;1698;1699;1700;1701;1702;1703;1704 1206;1207;1208;1209;1210;1211 1208 6 1706000 10059000 AGFAGDQIPK ANQPVVIDNGSGVIKAGFAGDQIPKYCFPN SGVIKAGFAGDQIPKYCFPNYVGRPKHVRV K A G P K Y 2 0 0 1 0 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 0 10 0 1002.5134 P42025;P61163 P61163 23 32 ACTR1B;ACTR1A Beta-centractin;Alpha-centractin no no 2 0.013813 96.665 By MS/MS By matching 7 0 2 1 1 17706000 17669000 37715 647 1090;843 667 1705;1706 1212 1212 1 315740 154830 AGFLAFTQLPK LESQFQAVRRLVASKAGFLAFTQLPKFRER VASKAGFLAFTQLPKFRERLGVKVVKALKR K A G P K F 2 0 0 0 0 1 0 1 0 0 2 1 0 2 1 0 1 0 0 0 0 0 11 0 1191.6652 O75165 O75165 440 450 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0057884 104.42 By MS/MS 2 0 1 1 72895 72895 0 648 287 668 1707 1213 1213 1 3623.3 0 AGGADAVQTVTGGLR ______________________________ AGGADAVQTVTGGLRSLYLRKVLPLEEAYR R A G L R S 3 1 0 1 0 1 0 4 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1371.7106 Q9H223 Q9H223 15 29 EHD4 EH domain-containing protein 4 yes yes 2 2.4095E-28 234.63 By MS/MS 5 0 1 1 1878300 1878300 0 649 2470 669 1708 1214 1214 1 77205 0 AGGAFDPYTLVR ______________________________ AGKAGGAFDPYTLVRQPHTILRVVSWLFSI K A G V R Q 2 1 0 1 0 0 0 2 0 0 1 0 0 1 1 0 1 0 1 1 0 0 12 0 1265.6404 O43759 O43759 11 22 SYNGR1 Synaptogyrin-1 yes yes 2 0.00037047 144.65 By MS/MS 8.5 0.5 1 1 2 815840 815840 0 650 220 670 1709;1710 1215 1215 1 367210 0 AGGAGVPAFYTPTGYGTLVQEGGSPIK EVELTPQGTLAERIRAGGAGVPAFYTPTGY TGYGTLVQEGGSPIKYNKDGSVAIASKPRE R A G I K Y 3 0 0 0 0 1 1 7 0 1 1 1 0 1 3 1 3 0 2 2 0 0 27 0 2594.3017 P55809 P55809 147 173 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2;3 6.3176E-12 135.09 By MS/MS 6 0 2 2 16006000 16006000 0 651 1038 671 1711;1712 1216;1217 1216 2 124810 0 AGGDAEPRPAEPPAWAGGAR SAAVLFSAVAVGKPRAGGDAEPRPAEPPAW EPRPAEPPAWAGGARPGPGVWDPNWDRREP R A G A R P 6 2 0 1 0 0 2 4 0 0 0 0 0 0 4 0 0 1 0 0 0 0 20 1 1931.9238 Q96HS1 Q96HS1 33 52 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 0.00041855 103.75 By MS/MS 8.5 0.5 1 1 2 3488700 3488700 0 652 2196 672 1713;1714 1218;1219 1218 2 321160 0 AGGDATDSSQTALDNK DGDSMCGGPGMSDPRAGGDATDSSQTALDN GGDATDSSQTALDNKASLLHSMPTHSSPRS R A G N K A 3 0 1 3 0 1 0 2 0 0 1 1 0 0 0 2 2 0 0 0 0 0 16 0 1549.6856 O75122 O75122 986 1001 CLASP2 CLIP-associating protein 2 yes yes 2 4.8721E-109 348.97 By MS/MS 3 0.816 1 1 1 3 1243000 1243000 0 653 279 673 1715;1716;1717 1220 1220 1 33857 0 AGGEAGVTLGQPHLSR ______________________________ GGEAGVTLGQPHLSRQDLTTLDVTKLTPLS M A G S R Q 2 1 0 0 0 1 1 4 1 0 2 0 0 0 1 1 1 0 0 1 0 0 16 0 1548.8009 P41091;Q2VIR3 P41091 2 17 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 4.5212E-11 191.48 By MS/MS By MS/MS 5.82 2.89 1 1 1 1 2 2 1 2 8 3 16525000 16232000 293100 654 836 674 1718;1719;1720;1721;1722;1723;1724;1725;1726;1727;1728 1221;1222;1223;1224;1225;1226;1227;1228 1228 8 1162000 933720 AGGFASALER GSESGSSNAKEPKTRAGGFASALERHSELL EPKTRAGGFASALERHSELLQKVEPLQKGS R A G E R H 3 1 0 0 0 0 1 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 977.49304 Q9Y2Q9 Q9Y2Q9 49 58 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.00067206 138.06 By MS/MS 9.5 0.5 1 1 2 16279000 16279000 0 655 2896 675 1729;1730 1229;1230 1230 2 10169000 0 AGGFVTGR GKSLPCFEPYEFTPRAGGFVTGRFLTGIKP PYEFTPRAGGFVTGRFLTGIKPPEFFFHCM R A G G R F 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 763.39769 O95602 O95602 947 954 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.030511 98.997 By MS/MS 2.5 0.5 1 1 2 339020 339020 0 656 401 676 1731;1732 1231 1231 1 13767 0 AGGGAAEQEELHYIPIR CGDSSPGPSASQGPRAGGGAAEQEELHYIP GGAAEQEELHYIPIRVLGRGAFGEATLYRR R A G I R V 3 1 0 0 0 1 3 3 1 2 1 0 0 0 1 0 0 0 1 0 0 0 17 0 1809.901 Q8TD19 Q8TD19 40 56 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 0.035539 61.657 By MS/MS 4 0 1 1 1077400 1077400 0 657 1999 677 1733 1232 1232 1 29411 0 AGGGPTLQCPPPSSPEK IAAGFGAYPVAAKARAGGGPTLQCPPPSSP GGPTLQCPPPSSPEKAASLEYDYETIRNID R A G E K A 1 0 0 0 1 1 1 3 0 0 1 1 0 0 5 2 1 0 0 0 0 0 17 0 1678.7985 Q96N66 Q96N66 272 288 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 2 0.0056604 102.97 By MS/MS 1 0 1 1 222540 222540 0 658 2229 678 1734 1233 1233 1 10873 0 AGGHHNDLEDVGR MAGFRRVANSQKCVRAGGHHNDLEDVGRDL VRAGGHHNDLEDVGRDLSHHTFFEMLGNWA R A G G R D 1 1 1 2 0 0 1 3 2 0 1 0 0 0 0 0 0 0 0 1 0 0 13 0 1375.6229 Q5JTZ9 Q5JTZ9 111 123 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 3 0.00015967 143.55 By MS/MS 4 0.816 1 1 1 3 3795200 3795200 0 659 1611 679 1735;1736;1737 1234 1234 1 106360 0 AGGIETIANEFSDR GLDVGSQSCYIAVARAGGIETIANEFSDRC RAGGIETIANEFSDRCTPSVISFGSKNRTI R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 14 0 1478.7001 Q92598 Q92598 20 33 HSPH1 Heat shock protein 105 kDa yes yes 2 5.7238E-18 220.29 By MS/MS 4.5 0.5 1 1 2 2228500 2228500 0 660 2063 680 1738;1739 1235 1235 1 62073 0 AGGIETIANEYSDR GIDLGFQSCYVAVARAGGIETIANEYSDRC RAGGIETIANEYSDRCTPACISFGPKNRSI R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 0 0 1 1 0 1 0 0 0 14 0 1494.6951 P34932 P34932 20 33 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 8.049E-18 215.04 By MS/MS 4.5 0.5 1 1 2 1300400 1300400 0 661 778 681 1740;1741 1236 1236 1 38613 0 AGGPGLER FTVGPLGEGGAHKVRAGGPGLERAEAGVPA GGAHKVRAGGPGLERAEAGVPAEFSIWTRE R A G E R A 1 1 0 0 0 0 1 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 8 0 755.3926 P21333;O75369 P21333 2243 2250 FLNA;FLNB Filamin-A;Filamin-B no no 2 0.018685 108.46 By MS/MS 2 0 1 1 1226900 1226900 0 662 648;300 682 1742 1237 1237 1 60983 0 AGGSASAMLQPLLDNQVGFK YSFDPVGSYQRDSFKAGGSASAMLQPLLDN SAMLQPLLDNQVGFKNMQNVEHVPLSLDRA K A G F K N 3 0 1 1 0 2 0 3 0 0 3 1 1 1 1 2 0 0 0 1 0 0 20 0 2003.0146 P20618 P20618 165 184 PSMB1 Proteasome subunit beta type-1 yes yes 2;3 3.2229E-31 214.89 By MS/MS 9.5 0.5 2 2 4 1463200 1463200 0 663 643 683 1743;1744;1745;1746 1238;1239 1238 434 2 865970 0 AGHNVIALVGGATAR VGHLLALLGLFHLQRAGHNVIALVGGATAR AGHNVIALVGGATARLGDPSGRTKEREALE R A G A R L 4 1 1 0 0 0 0 3 1 1 1 0 0 0 0 0 1 0 0 2 0 0 15 0 1405.779 Q9Y2Z4 Q9Y2Z4 104 118 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2;3 4.6891E-07 161.48 By MS/MS 6.8 0.748 2 2 1 5 30415000 30415000 0 664 2909 684 1747;1748;1749;1750;1751 1240;1241 1240 2 538100 0 AGHQFGVTWR SEALEEENDETSRRKAGHQFGVTWRAKNNA TSRRKAGHQFGVTWRAKNNAERIFSLMPEK K A G W R A 1 1 0 0 0 1 0 2 1 0 0 0 0 1 0 0 1 1 0 1 0 0 10 0 1157.573 Q96EY7 Q96EY7 230 239 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 3 0.0047074 103.31 By MS/MS 5 0 1 1 1337200 1337200 0 665 2170 685 1752 1242 1242 1 54964 0 AGIIASAR VDHGKSTLTDSLVCKAGIIASARAGETRFT TDSLVCKAGIIASARAGETRFTDTRKDEQE K A G A R A 3 1 0 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 757.44464 P13639 P13639 43 50 EEF2 Elongation factor 2 yes yes 2 0.012155 116.9 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 21117000 21117000 0 666 576 686 1753;1754;1755;1756;1757;1758;1759;1760;1761 1243;1244;1245;1246;1247;1248 1243 6 785680 0 AGIICQLNAR VLHEVMEQQTLSIAKAGIICQLNARTSVLA LSIAKAGIICQLNARTSVLAAANPIESQWN K A G A R T 2 1 1 0 1 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1114.5917 P33991 P33991 601 610 MCM4 DNA replication licensing factor MCM4 yes yes 2 7.7053E-05 168.23 By MS/MS 4.5 0.5 1 1 2 8674100 8674100 0 667 773 687 1762;1763 1249;1250 1249 2 252790 0 AGILTTLNAR AIHEVMEQQTISIAKAGILTTLNARCSILA ISIAKAGILTTLNARCSILAAANPAYGRYN K A G A R C 2 1 1 0 0 0 0 1 0 1 2 0 0 0 0 0 2 0 0 0 0 0 10 0 1028.5978 P33993 P33993 472 481 MCM7 DNA replication licensing factor MCM7 yes yes 2 8.5939E-05 167.23 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 17937000 17937000 0 668 775 688 1764;1765;1766;1767;1768;1769 1251;1252 1251 2 626450 0 AGIPKEEVK ATKLGSIAIQGAIEKAGIPKEEVKEAYMGN QGAIEKAGIPKEEVKEAYMGNVLQGGEGQA K A G V K E 1 0 0 0 0 0 2 1 0 1 0 2 0 0 1 0 0 0 0 1 0 0 9 1 969.5495 P24752 P24752 79 87 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 3 0.0039586 107.69 By MS/MS 7.5 0.5 1 1 2 8028300 8028300 0 669 680 689 1770;1771 1253 1253 1 148600 0 AGIPKEEVKEAYMGNVLQGGEGQAPTR ATKLGSIAIQGAIEKAGIPKEEVKEAYMGN MGNVLQGGEGQAPTRQAVLGAGLPISTPCT K A G T R Q 3 1 1 0 0 2 4 5 0 1 1 2 1 0 2 0 1 0 1 2 0 0 27 2 2828.4127 P24752 P24752 79 105 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 3;4 0.00038625 77.401 By MS/MS 7.33 0.471 2 1 3 11969000 11969000 0 670 680 690 1772;1773;1774 1254;1255 1255 454 2 225280 0 AGITTTLNSR AIHEAMEQQTISIAKAGITTTLNSRCSVLA ISIAKAGITTTLNSRCSVLAAANSVFGRWD K A G S R C 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 3 0 0 0 0 0 10 0 1032.5564 P33992 P33992 472 481 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00048742 145.46 By MS/MS 3.33 1.7 1 1 1 3 5192300 5192300 0 671 774 691 1775;1776;1777 1256;1257 1257 2 187950 0 AGIVQEDVQPPGLK LMRLEEYKKEQAINRAGIVQEDVQPPGLKV RAGIVQEDVQPPGLKVWSDPFGRK______ R A G L K V 1 0 0 1 0 2 1 2 0 1 1 1 0 0 2 0 0 0 0 2 0 0 14 0 1449.7827 Q8N5G0 Q8N5G0 45 58 SMIM20 Small integral membrane protein 20 yes yes 2 6.6832E-12 196.16 By MS/MS 10 0 1 1 1474800 1474800 0 672 1920 692 1778 1258 1258 1 1567500 0 AGIVTSLQAR SIHEAMEQQSISISKAGIVTSLQARCTVIA ISISKAGIVTSLQARCTVIAAANPIGGRYD K A G A R C 2 1 0 0 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1014.5822 P49736 P49736 614 623 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00054942 143.03 By MS/MS 4 0.816 1 1 1 3 3853700 3853700 0 673 928 693 1779;1780;1781 1259;1260 1259 2 108090 0 AGKGEVTFEDVK APDALFMVAFQLFDKAGKGEVTFEDVKQVF FDKAGKGEVTFEDVKQVFGQTTIHQHIPFN K A G V K Q 1 0 0 1 0 0 2 2 0 0 0 2 0 1 0 0 1 0 0 2 0 0 12 1 1278.6456 Q9UJS0 Q9UJS0 102 113 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 0.00034799 161.67 By MS/MS 5 0 2 2 9220800 9220800 0 674 2798 694 1782;1783 1261;1262 1261 2 379010 0 AGLAMPGPPLGPVLGQR LRKPEVGGVIRAIVRAGLAMPGPPLGPVLG LAMPGPPLGPVLGQRGVSINQFCKEFNERT R A G Q R G 2 1 0 0 0 1 0 4 0 0 3 0 1 0 4 0 0 0 0 1 0 0 17 0 1629.9025 Q9Y3B7 Q9Y3B7 26 42 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.0015463 114.4 By MS/MS 9 0 1 1 493490 493490 0 675 2927 695 1784 1263;1264 1264 1683 2 283220 0 AGLDPDLETR PEERLWISYFDGDPKAGLDPDLETRDIWLS DGDPKAGLDPDLETRDIWLSLGVPASRVLS K A G T R D 1 1 0 2 0 0 1 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 10 0 1085.5353 Q5JTZ9 Q5JTZ9 178 187 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.026744 87.298 By MS/MS 4.5 0.5 1 1 2 10487000 10487000 0 676 1611 696 1785;1786 1265 1265 1 304380 0 AGLELLSDQGYR ______________________________ ______________________________ M A G Y R V 1 1 0 1 0 1 1 2 0 0 3 0 0 0 0 1 0 0 1 0 0 0 12 0 1320.6674 Q9NPD3 Q9NPD3 2 13 EXOSC4 Exosome complex component RRP41 yes yes 2 0.0017107 108.31 By MS/MS 7.5 0.5 1 1 2 2373600 2373600 0 677 2581 697 1787;1788 1266 1266 1 126690 0 AGLELLSDQGYRVDGR ______________________________ GLELLSDQGYRVDGRRAGELRKIQARMGVF M A G G R R 1 2 0 2 0 1 1 3 0 0 3 0 0 0 0 1 0 0 1 1 0 0 16 1 1747.8853 Q9NPD3 Q9NPD3 2 17 EXOSC4 Exosome complex component RRP41 yes yes 2 0.027836 98.105 By MS/MS 8 0 1 1 1144000 1144000 0 678 2581 698 1789 1267 1267 1 75467 0 AGLEQELEAGVGGR VLARPQRFAQLELSRAGLEQELEAGVGGRF RAGLEQELEAGVGGRFRCSCYGSAPMHGFA R A G G R F 2 1 0 0 0 1 3 4 0 0 2 0 0 0 0 0 0 0 0 1 0 0 14 0 1384.6947 Q96LA8 Q96LA8 261 274 PRMT6 Protein arginine N-methyltransferase 6 yes yes 2 9.3562E-06 168.98 By MS/MS 6.5 0.5 1 1 2 2334100 2334100 0 679 2225 699 1790;1791 1268 1268 1 32174 0 AGLLNTSGTK LQASHSELQVPTPGRAGLLNTSGTKGLECS PTPGRAGLLNTSGTKGLECSPSTPTMNSYF R A G T K G 1 0 1 0 0 0 0 2 0 0 2 1 0 0 0 1 2 0 0 0 0 0 10 0 960.52401 Q08AM6 Q08AM6 503 512 VAC14 Protein VAC14 homolog yes yes 2 8.6878E-05 167.12 By MS/MS 5 0 1 1 996680 996680 0 680 1294 700 1792 1269 1269 1 40968 0 AGLLSQAK PGTRDPTRLRPVYARAGLLSQAKGSAYLEA LRPVYARAGLLSQAKGSAYLEAGGTKVLCA R A G A K G 2 0 0 0 0 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 786.45995 Q5RKV6 Q5RKV6 43 50 EXOSC6 Exosome complex component MTR3 yes yes 2 0.038799 95.741 By MS/MS 8 0 1 1 992870 992870 0 681 1615 701 1793 1270 1270 1 65499 0 AGLLTEQAPGDTLTAVESK SYGPEHLLTFSNLRRAGLLTEQAPGDTLTA TEQAPGDTLTAVESKVSKLVTDKAAGKITD R A G S K V 3 0 0 1 0 1 2 2 0 0 3 1 0 0 1 1 3 0 0 1 0 0 19 0 1899.9789 Q9H267 Q9H267 440 458 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 2 4.2741E-11 158.31 By MS/MS 5 0 1 1 1071700 1071700 0 682 2471 702 1794 1271;1272 1272 2 44052 0 AGLNQEWGLIR HGVTVQNLLGELYGKAGLNQEWGLIRYISG LYGKAGLNQEWGLIRYISGLLRKKVEVLAE K A G I R Y 1 1 1 0 0 1 1 2 0 1 2 0 0 0 0 0 0 1 0 0 0 0 11 0 1255.6673 P46019 P46019 814 824 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 2 0.00029168 151.22 By MS/MS 3.5 0.5 1 1 2 527880 527880 0 683 874 703 1795;1796 1273 1273 1 13842 0 AGLQFPVGR QGGKARAKAKTRSSRAGLQFPVGRVHRLLR KTRSSRAGLQFPVGRVHRLLRKGNYAERVG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104;Q71UI9;P0C0S5;Q8IUE6 Q99878 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;H2AFV;H2AFZ;HIST2H2AB Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A type 2-B yes no 2 0.0060578 113.41 By MS/MS By matching 10 0 2 1 1 1632400 1600500 31829 684 461 704 1797;1798 1274 1274 1 1701200 816400 AGLQTSPPIVPLDR LAKAVLRMLLLLWFKAGLQTSPPIVPLDRE KAGLQTSPPIVPLDRETQAQPPDGDHSPGN K A G D R E 1 1 0 1 0 1 0 1 0 1 2 0 0 0 3 1 1 0 0 1 0 0 14 0 1462.8144 Q9Y5Y5 Q9Y5Y5 133 146 PEX16 Peroxisomal membrane protein PEX16 yes yes 2 0.0046784 105.36 By MS/MS 7.5 0.5 1 1 2 2841200 2841200 0 685 2988 705 1799;1800 1275 1275 1 58262 0 AGLSDLELRR ______________________________ ______________________________ M A G R R E 1 2 0 1 0 0 1 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 1 1128.6251 Q8NC56 Q8NC56 2 11 LEMD2 LEM domain-containing protein 2 yes yes 2 0.020305 101.25 By MS/MS By matching 6 0 2 1 1 18820000 18766000 54113 686 1950 706 1801;1802 1276 1276 1 146340 165960 AGLSKLPDLK RLRERRKKQKLAKERAGLSKLPDLKDAEAV LAKERAGLSKLPDLKDAEAVQKFFLEEIQL R A G L K D 1 0 0 1 0 0 0 1 0 0 3 2 0 0 1 1 0 0 0 0 0 0 10 1 1040.623 Q15388 Q15388 52 61 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2;3 0.0012977 157.66 By MS/MS 10 0 2 2 3151100 3151100 0 687 1495 707 1803;1804 1277;1278 1278 2 3349300 0 AGLSKLPDLKDAEAVQK RLRERRKKQKLAKERAGLSKLPDLKDAEAV LSKLPDLKDAEAVQKFFLEEIQLGEELLAQ R A G Q K F 3 0 0 2 0 1 1 1 0 0 3 3 0 0 1 1 0 0 0 1 0 0 17 2 1781.9887 Q15388 Q15388 52 68 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 3 0.0003306 120.63 By MS/MS 10 0 1 1 1697400 1697400 0 688 1495 708 1805 1279 1279 1 1804100 0 AGLSNYGNPR GSIAAGYLSDRAMAKAGLSNYGNPRHGLLL RAMAKAGLSNYGNPRHGLLLFMMAGMTVSM K A G P R H 1 1 2 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 10 0 1047.5098 O43826 O43826 291 300 SLC37A4 Glucose-6-phosphate translocase yes yes 2 0.0007548 134.23 By MS/MS 2 0.816 1 1 1 3 325710 325710 0 689 229 709 1806;1807;1808 1280;1281 1281 2 13475 0 AGLTDLQR ______________________________ ______________________________ M A G Q R L 1 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 872.47158 O75935 O75935 2 9 DCTN3 Dynactin subunit 3 yes yes 2 0.0023777 132.08 By MS/MS 9 0 1 1 2005300 2005300 0 690 338 710 1809 1282 1282 1 1150900 0 AGLVDDFEK PPAIDWAYYKANVAKAGLVDDFEKKFNALK KANVAKAGLVDDFEKKFNALKVPVPEDKYT K A G E K K 1 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 992.48148 O75947 O75947 64 72 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.0074341 110.41 By MS/MS 9.5 0.5 1 1 2 6091500 6091500 0 691 340 711 1810;1811 1283 1283 1 3518000 0 AGLVDDFEKK PPAIDWAYYKANVAKAGLVDDFEKKFNALK ANVAKAGLVDDFEKKFNALKVPVPEDKYTA K A G K K F 1 0 0 2 0 0 1 1 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1120.5764 O75947 O75947 64 73 ATP5H ATP synthase subunit d, mitochondrial yes yes 2;3 0.00029764 168.25 By MS/MS 9 0 2 2 9985700 9985700 0 692 340 712 1812;1813 1284;1285 1284 2 5730900 0 AGLVELLLR AGAGPAMAVWTRATKAGLVELLLRERWVRV WTRATKAGLVELLLRERWVRVVAELSGESL K A G L R E 1 1 0 0 0 0 1 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 Q13425 Q13425 25 33 SNTB2 Beta-2-syntrophin yes yes 2 0.0010958 139.97 By MS/MS 6 0 1 1 607960 607960 0 693 1368 713 1814 1286 1286 1 4740.9 0 AGLYGLPR IGGVDMVTDDDRRWKAGLYGLPRRSGKLKD DDDRRWKAGLYGLPRRSGKLKDLSRFDASF K A G P R R 1 1 0 0 0 0 0 2 0 0 2 0 0 0 1 0 0 0 1 0 0 0 8 0 845.47594 P49327 P49327 42 49 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0090065 122.15 By MS/MS 5.25 3.15 1 1 1 1 1 1 1 1 8 14369000 14369000 0 694 915 714 1815;1816;1817;1818;1819;1820;1821;1822 1287;1288;1289;1290;1291 1288 5 1093100 0 AGMAAVASPTGNCDLER DVAVYGVEVPGTEGRAGMAAVASPTGNCDL MAAVASPTGNCDLERFAQVLEKELPLYARP R A G E R F 4 1 1 1 1 0 1 2 0 0 1 0 1 0 1 1 1 0 0 1 0 0 17 0 1718.7716 Q6P1M0 Q6P1M0 548 564 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 9.9859E-08 156.36 By MS/MS 1.75 0.829 2 1 1 4 1032400 1032400 0 695 1701 715;716 1823;1824;1825;1826 1292;1293 1292 1217 2 48492 0 AGMSAEQAQGLLEK EDITEPQSILAAAEKAGMSAEQAQGLLEKI KAGMSAEQAQGLLEKIATPKVKNQLKETTE K A G E K I 3 0 0 0 0 2 2 2 0 0 2 1 1 0 0 1 0 0 0 0 0 0 14 0 1431.7028 Q9Y2Q3 Q9Y2Q3 145 158 GSTK1 Glutathione S-transferase kappa 1 yes yes 2 1.0346E-25 282.21 By MS/MS 9 0 2 2 3046000 3046000 0 696 2895 717;718 1827;1828 1294;1295 1295 1665 2 1748100 0 AGMSSLKG TVIATNILLVDEIMRAGMSSLKG_______ LVDEIMRAGMSSLKG_______________ R A G K G - 1 0 0 0 0 0 0 2 0 0 1 1 1 0 0 2 0 0 0 0 0 0 8 1 749.37417 P40227 P40227 524 531 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.026755 125.81 By MS/MS 6 0.707 1 2 1 4 12868000 12868000 0 697 828 719;720 1829;1830;1831;1832 1296;1297 1296 569 2 102920 0 AGNFYVPAEPK QMYRTEIRMARMARKAGNFYVPAEPKLAFV MARKAGNFYVPAEPKLAFVIRIRGINGVSP K A G P K L 2 0 1 0 0 0 1 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 11 0 1191.5924 P18124 P18124 78 88 RPL7 60S ribosomal protein L7 yes yes 2 0.014388 94.409 By MS/MS By matching 8 0 2 1 1 1088400 1069400 19003 698 622 721 1833;1834 1298 1298 1 70551 162120 AGNGQWASVIR FLNENLPESIFGAPKAGNGQWASVIRVMNP GAPKAGNGQWASVIRVMNPIQGNTLDLVQL K A G I R V 2 1 1 0 0 1 0 2 0 1 0 0 0 0 0 1 0 1 0 1 0 0 11 0 1157.5942 Q15393 Q15393 857 867 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.0011594 131.52 By MS/MS 1 0 1 1 118570 118570 0 699 1498 722 1835 1299 1299 1 5792.9 0 AGNILFTLDGDIK LNYLHDNKIIHRDLKAGNILFTLDGDIKLA LKAGNILFTLDGDIKLADFGVSAKNTRTIQ K A G I K L 1 0 1 2 0 0 0 2 0 2 2 1 0 1 0 0 1 0 0 0 0 0 13 0 1375.7347 Q9H2G2 Q9H2G2 158 170 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.032059 78.342 By MS/MS 2 0 1 1 31753 31753 0 700 2476 723 1836 1300 1300 1 1578.3 0 AGNILLSEPGLVK LAYLHSHNMIHRDVKAGNILLSEPGLVKLG VKAGNILLSEPGLVKLGDFGSASIMAPANS K A G V K L 1 0 1 0 0 0 1 2 0 1 3 1 0 0 1 1 0 0 0 1 0 0 13 0 1309.7606 Q9UL54 Q9UL54 154 166 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 3.3147E-05 164.66 By MS/MS 3 0 1 1 1184300 1184300 0 701 2821 724 1837 1301 1301 1 30916 0 AGNLGGGVVTIER NFEQFLQERIKVNGKAGNLGGGVVTIERSK GKAGNLGGGVVTIERSKSKITVTSEVPFSK K A G E R S 1 1 1 0 0 0 1 4 0 1 1 0 0 0 0 0 1 0 0 2 0 0 13 0 1241.6728 P35268 P35268 53 65 RPL22 60S ribosomal protein L22 yes yes 2 2.6315E-05 167.18 By MS/MS By MS/MS 10 0 2 1 1 11176000 10968000 208510 702 788 725 1838;1839 1302;1303 1303 2 11658000 5348100 AGNVIFR ITGDFALVKAWKADRAGNVIFRKSARNFNL VKAWKADRAGNVIFRKSARNFNLPMCKAAE R A G F R K 1 1 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 775.43407 P55809 P55809 218 224 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 0.011461 144.29 By MS/MS 6 0 1 1 0 0 0 703 1038 726 1840 1304 1304 1 0 0 AGPELLLDSNIR ______________________________ ______________________________ M A G I R L 1 1 1 1 0 0 1 1 0 1 3 0 0 0 1 1 0 0 0 0 0 0 12 0 1296.7038 Q9P0I2 Q9P0I2 2 13 EMC3 ER membrane protein complex subunit 3 yes yes 2 1.72E-16 219.72 By MS/MS 8 0 1 1 1884400 1884400 0 704 2725 727 1841 1305 1305 1 124310 0 AGPESDAQYQFTGIK ______________________________ AGPESDAQYQFTGIKKYFNSYTLTGRMNCV M A G I K K 2 0 0 1 0 2 1 2 0 1 0 1 0 1 1 1 1 0 1 0 0 0 15 0 1610.7577 Q96IX5 Q96IX5 2 16 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 2 1.3816E-49 270.93 By MS/MS By matching 10 0 2 1 1 9810300 9753600 56772 705 2203 728 1842;1843 1306 1306 1 10367000 1456200 AGPESDAQYQFTGIKK ______________________________ GPESDAQYQFTGIKKYFNSYTLTGRMNCVL M A G K K Y 2 0 0 1 0 2 1 2 0 1 0 2 0 1 1 1 1 0 1 0 0 0 16 1 1738.8526 Q96IX5 Q96IX5 2 17 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 2 3.785E-38 262.15 By MS/MS 10 0 1 1 1059700 1059700 0 706 2203 729 1844 1307 1307 1 1126300 0 AGPGVEDLWR ITAVLTVDSEEPSFKAGPGVEDLWRLFVPA EPSFKAGPGVEDLWRLFVPALDKPETDLLS K A G W R L 1 1 0 1 0 0 1 2 0 0 1 0 0 0 1 0 0 1 0 1 0 0 10 0 1098.5458 Q9UNI6 Q9UNI6 68 77 DUSP12 Dual specificity protein phosphatase 12 yes yes 2 0.00088654 128.12 By MS/MS 8 0 1 1 265010 265010 0 707 2842 730 1845 1308 1308 1 17483 0 AGPIWDLR PRDLFEDELVPLFEKAGPIWDLRLMMDPLT LVPLFEKAGPIWDLRLMMDPLTGLNRGYAF K A G L R L 1 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 8 0 926.4974 O43390;O60506 O60506 185 192 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 0.039336 95.531 By MS/MS 5.5 0.5 1 1 2 786440 786440 0 708 196;252 731 1846;1847 1309 1309 1 24125 0 AGPLQGGGAR ______________________________ ______________________________ M A G A R A 2 1 0 0 0 1 0 4 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 882.46716 Q9P015 Q9P015 2 11 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.00035166 127.46 By MS/MS By matching 8 0 2 1 1 1292100 1271000 21084 709 2721 732 1848;1849 1310 1310 1 83851 179870 AGQAVDDFIEK VSKLKKPRRIILLVKAGQAVDDFIEKLVPL LLVKAGQAVDDFIEKLVPLLDTGDIIIDGG K A G E K L 2 0 0 2 0 1 1 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 11 0 1191.5772 P52209 P52209 77 87 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 5.4679E-07 185.96 By MS/MS 8 1.41 1 1 1 1 1 5 37956000 37956000 0 710 981 733 1850;1851;1852;1853;1854 1311;1312 1312 2 606530 0 AGQDPALSTSHPFYDVAR ______________________________ DPALSTSHPFYDVARHGILQVAGDDRFGRR M A G A R H 3 1 0 2 0 1 0 1 1 0 1 0 0 1 2 2 1 0 1 1 0 0 18 0 1930.9173 P85298 P85298 2 19 ARHGAP8 Rho GTPase-activating protein 8 yes yes 2 5.3837E-11 160.47 By MS/MS 7 0 1 1 665330 665330 0 711 1221 734 1855 1313 1313 1 11890 0 AGQEDVLFPVAR AEQGGQASDRGYLVRAGQEDVLFPVARAQV LVRAGQEDVLFPVARAQVCGGFILHEAVAP R A G A R A 2 1 0 1 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 2 0 0 12 0 1300.6776 Q5JTZ9 Q5JTZ9 581 592 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 1.5993E-07 211.64 By MS/MS By matching 4.38 1.73 1 1 2 2 1 1 6 2 31300000 31166000 134660 712 1611 735 1856;1857;1858;1859;1860;1861;1862;1863 1314;1315;1316;1317;1318 1316 5 846210 293600 AGQQALR KLTEVLTDSHVKVQKAGQQALRQIGSVIRN DSHVKVQKAGQQALRQIGSVIRNPEILAIA K A G L R Q 2 1 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 742.40859 Q92616 Q92616 1557 1563 GCN1L1 Translational activator GCN1 yes yes 2 0.015839 137.83 By MS/MS 2.5 0.5 1 1 2 1967300 1967300 0 713 2068 736 1864;1865 1319;1320 1319 2 87848 0 AGQSAAGAAPGGGVDTR ______________________________ QSAAGAAPGGGVDTRDAEMPATEKDLAEDA R A G T R D 5 1 0 1 0 1 0 5 0 0 0 0 0 0 1 1 1 0 0 1 0 0 17 0 1441.691 P21333 P21333 8 24 FLNA Filamin-A yes yes 2 6.2812E-25 219.95 By MS/MS By matching 3.17 1.07 2 2 1 1 4 2 2331900 2301300 30586 714 648 737 1866;1867;1868;1869;1870;1871 1321;1322;1323 1321 3 99866 35744 AGQTTYSGVIDCFR TPADVIKTRLQVAARAGQTTYSGVIDCFRK RAGQTTYSGVIDCFRKILREEGPKALWKGA R A G F R K 1 1 0 1 1 1 0 2 0 1 0 0 0 1 0 1 2 0 1 1 0 0 14 0 1573.7195 Q9UJS0;O75746 Q9UJS0 554 567 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 1.2229E-25 239.48 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 21168000 21168000 0 715 2798;327 738 1872;1873;1874;1875;1876;1877 1324;1325 1324 2 980550 0 AGQTTYSGVIDCFRK TPADVIKTRLQVAARAGQTTYSGVIDCFRK AGQTTYSGVIDCFRKILREEGPKALWKGAG R A G R K I 1 1 0 1 1 1 0 2 0 1 0 1 0 1 0 1 2 0 1 1 0 0 15 1 1701.8145 Q9UJS0;O75746 Q9UJS0 554 568 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2;3 0.0007064 159.58 By MS/MS 5 0 2 2 13542000 13542000 0 716 2798;327 739 1878;1879 1326;1327 1327 2 556630 0 AGQVFLEELGNHK FGWFLTKKSSETLRKAGQVFLEELGNHKAF RKAGQVFLEELGNHKAFKKELRQFVPGDEP K A G H K A 1 0 1 0 0 1 2 2 1 0 2 1 0 1 0 0 0 0 0 1 0 0 13 0 1440.7361 P09543 P09543 205 217 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 3.7769E-35 266.26 By MS/MS 6.5 0.5 1 1 2 5379700 5379700 0 717 516 740 1880;1881 1328 1328 1 78697 0 AGSAMIGDCLQIK A G I K 2 0 0 1 1 1 0 2 0 2 1 1 1 0 0 1 0 0 0 0 0 0 13 0 1362.6636 REV__P42858 yes yes 2 0.0016091 123.86 By MS/MS 8 0 1 1 992660 992660 0 + 718 3025 741 1882 1329 1329 1 65485 0 AGSISTLDSLDFAR GREPSTASGGGQLNRAGSISTLDSLDFARY RAGSISTLDSLDFARYSDDGNRETDEKVAV R A G A R Y 2 1 0 2 0 0 0 1 0 1 2 0 0 1 0 3 1 0 0 0 0 0 14 0 1451.7256 Q9P260 Q9P260 178 191 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 2 1.5394E-05 163.9 By MS/MS 3 0 1 1 337330 337330 0 719 2735 742 1883 1330 1330 1 8806 0 AGSPTLLNCLMYK ESDYFTPQGEFRVDKAGSPTLLNCLMYKMS DKAGSPTLLNCLMYKMSYYRFGEMQLDFRT K A G Y K M 1 0 1 0 1 0 0 1 0 0 3 1 1 0 1 1 1 0 1 0 0 0 13 0 1466.7262 Q8TCJ2 Q8TCJ2 707 719 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.0046865 99.53 By MS/MS 1 0 1 1 186360 186360 0 720 1995 743 1884 1331 1331 1310 1 9105.3 0 AGSQVVATTAR ______________________________ SAPRAGSQVVATTARHSAAYRADPLRVSSR R A G A R H 3 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 2 0 0 11 0 1059.5673 Q9BWH2 Q9BWH2 8 18 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 1.275E-10 205.52 By MS/MS 9 0 1 1 0 0 0 721 2393 744 1885 1332 1332 1 0 0 AGSRLETVGSIFSR ______________________________ MAGSRLETVGSIFSRTRDLVRAGVLKEKPL M A G S R T 1 2 0 0 0 0 1 2 0 1 1 0 0 1 0 3 1 0 0 1 0 0 14 1 1478.7841 Q9Y3D9 Q9Y3D9 2 15 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00034581 145.14 By MS/MS 9.5 0.5 1 1 2 2778800 2778800 0 722 2935 745 1886;1887 1333 1333 1 1622100 0 AGSSGSSSGGGGGGPGGR PGMERQNRRPGPGGKAGSSGSSSGGGGGGP SGSSSGGGGGGPGGRTGPGRGDKRSWPSPK K A G G R T 1 1 0 0 0 0 0 10 0 0 0 0 0 0 1 5 0 0 0 0 0 0 18 0 1347.5763 P48634 P48634 1405 1422 PRRC2A Protein PRRC2A yes yes 2 0.006226 93.623 By MS/MS 2 0 1 1 79937 79937 0 723 907 746 1888 1334 1334 1 3973.3 0 AGSSTPGDAPPAVAEVQGR AVGDTSAAGSSEQPRAGSSTPGDAPPAVAE TPGDAPPAVAEVQGRSDGSGESAQPPEDSS R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00072299 125.84 By MS/MS 2 0.816 1 1 1 3 1844500 1844500 0 724 1803 747 1889;1890;1891 1335;1336 1335 2 88282 0 AGSVELLGAMAYCAPK PSLLAALEEESWRTKAGSVELLGAMAYCAP GSVELLGAMAYCAPKQLSSCLPNIVPKLTE K A G P K Q 4 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 0 0 1 1 0 0 16 0 1636.7953 Q92616 Q92616 1515 1530 GCN1L1 Translational activator GCN1 yes yes 2 1.9052E-15 211.64 By MS/MS 2.5 0.5 1 1 2 1919500 1919500 0 725 2068 748 1892;1893 1337 1337 1340 1 83874 0 AGTAFYIDQCAVR RDTTETDLKQRREIRAGTAFYIDQCAVRAA IRAGTAFYIDQCAVRAATEGRTLILEGLEK R A G V R A 3 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 1 0 1 1 0 0 13 0 1470.6925 A3KMH1 A3KMH1 153 165 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00055885 136.81 By MS/MS 2.5 1.12 1 1 1 1 4 975290 975290 0 726 13 749 1894;1895;1896;1897 1338 1338 1 38575 0 AGTALKR ______________________________ ______________________________ M A G K R L 2 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 7 1 715.43407 P60604 P60604 2 8 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 yes yes 2 0.043989 138.37 By MS/MS 10 0 1 1 13786000 13786000 0 727 1070 750 1898 1339 1339 1 14653000 0 AGTGVDNVDLEAATR ADVINAAEKLQVVGRAGTGVDNVDLEAATR AGTGVDNVDLEAATRKGILVMNTPNGNSLS R A G T R K 3 1 1 2 0 0 1 2 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1487.7216 O43175 O43175 76 90 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.5582E-15 249.28 By MS/MS 6.88 1.9 1 1 2 1 1 1 1 8 234510000 234510000 0 728 185 751 1899;1900;1901;1902;1903;1904;1905;1906 1340;1341;1342;1343 1341 4 5492600 0 AGTGVDNVDLEAATRK ADVINAAEKLQVVGRAGTGVDNVDLEAATR GTGVDNVDLEAATRKGILVMNTPNGNSLSA R A G R K G 3 1 1 2 0 0 1 2 0 0 1 1 0 0 0 0 2 0 0 2 0 0 16 1 1615.8166 O43175 O43175 76 91 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 5.1888E-21 231.07 By MS/MS 6.5 0.5 1 1 2 13098000 13098000 0 729 185 752 1907;1908 1344 1344 1 105100 0 AGTVVLDDVELR ______________________________ ______________________________ M A G L R E 1 1 0 2 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 3 0 0 12 0 1285.6878 P25205 P25205 2 13 MCM3 DNA replication licensing factor MCM3 yes yes 2 1.3354E-08 194.54 By MS/MS 5.36 2.77 1 1 1 2 1 1 1 1 1 1 11 16861000 16861000 0 730 683 753 1909;1910;1911;1912;1913;1914;1915;1916;1917;1918;1919 1345;1346;1347;1348;1349;1350;1351 1348 7 600890 0 AGTVVLDDVELREAQR ______________________________ GTVVLDDVELREAQRDYLDFLDDEEDQGIY M A G Q R D 2 2 0 2 0 1 2 1 0 0 2 0 0 0 0 0 1 0 0 3 0 0 16 1 1769.9272 P25205 P25205 2 17 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0035224 117.95 By MS/MS 4 0 1 1 1883600 1883600 0 731 683 754 1920 1352 1352 1 51419 0 AGVAPLQVK VRANLPQSFQVDTSKAGVAPLQVKVQGPKG QVDTSKAGVAPLQVKVQGPKGLVEPVDVVD K A G V K V 2 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 9 0 881.53345 P21333 P21333 1478 1486 FLNA Filamin-A yes yes 2 0.030541 90.777 By MS/MS 2.5 0.5 1 1 2 1150500 1150500 0 732 648 755 1921;1922 1353 1353 1 53926 0 AGVFPYR ______________________________ ______________________________ M A G Y R G 1 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 1 0 0 7 0 808.42317 Q6P2Q9 Q6P2Q9 2 8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 1 0.050614 71.995 By MS/MS 9 0 1 1 217520 217520 0 733 1706 756 1923 1354 1354 0 124840 0 AGVGLLEVVLEPDMSCGEEAATAVR LHDNLRSQTLIDLNRAGVGLLEVVLEPDMS EPDMSCGEEAATAVRELQLILQALGTSQAN R A G V R E 4 1 0 1 1 0 4 3 0 0 3 0 1 0 1 1 1 0 0 4 0 0 25 0 2572.2513 O75879 O75879 213 237 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2;3 0.020064 68.257 By MS/MS 6 0 2 2 584430 584430 0 734 333 757 1924;1925 1355;1356 1356 2 4557.4 0 AGVKDTENR EMREDEKPLVLEMLKAGVKDTENRVALHAL VLEMLKAGVKDTENRVALHALTRPPALLLL K A G N R V 1 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 9 1 988.49377 Q8WUY8 Q8WUY8 25 33 NAT14 N-acetyltransferase 14 yes yes 2 0.0058537 146.79 By MS/MS 9 0 1 1 189960 189960 0 735 2021 758 1926 1357 1357 1 109020 0 AGVLAERK MEFVSEVQRKVHEARAGVLAERKALKDAAE RKVHEARAGVLAERKALKDAAEHRELMAWN R A G R K A 2 1 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 1 842.4974 Q9BYN8 Q9BYN8 87 94 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.01031 152.47 By MS/MS 9 0 1 1 420090 420090 0 736 2417 759 1927 1358 1358 1 241090 0 AGVLAGHDNR DDFNCNIWDAMKGDRAGVLAGHDNRVSCLG MKGDRAGVLAGHDNRVSCLGVTDDGMAVAT R A G N R V 2 1 1 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1008.5101 P62873;P62879;Q9HAV0 P62879 305 314 GNB1;GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 no no 2 0.0056249 128.38 By MS/MS 8 0 1 1 0 0 0 737 1156;1154 760 1928 1359 1359 1 0 0 AGVNTVTTLVENK AGKGDVPTKRPPVLRAGVNTVTTLVENKKA LRAGVNTVTTLVENKKAQLVVIAHDVDPIE R A G N K K 1 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 3 0 0 3 0 0 13 0 1344.7249 P62424 P62424 138 150 RPL7A 60S ribosomal protein L7a yes yes 2 9.6025E-46 271.21 By MS/MS By matching 8.33 0.471 2 1 2 1 4222000 4124400 97546 738 1135 761 1929;1930;1931 1360 1360 1 304100 832190 AGVRPSSSGSAWEACSEAPSK SFISERRTIKQESGRAGVRPSSSGSAWEAC SSGSAWEACSEAPSKGSQDGVTWEAEVELA R A G S K G 4 1 0 0 1 0 2 2 0 0 0 1 0 0 2 6 0 1 0 1 0 0 21 1 2119.9593 Q12789 Q12789 839 859 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.00071453 86.189 By MS/MS 2.5 0.5 1 1 2 503050 503050 0 739 1306 762 1932;1933 1361 1361 1 17224 0 AGVSQVLNR ATGNWGDQKKAHQARAGVSQVLNRLTFAST KAHQARAGVSQVLNRLTFASTLSHLRRLNS R A G N R L 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 9 0 942.52468 P30876 P30876 464 472 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.00022481 162.49 By MS/MS 3 0 1 1 2954700 2954700 0 740 748 763 1934 1362 1362 1 77134 0 AGVVTPGITEDQLWR GAQLEASRNIVQNYRAGVVTPGITEDQLWR AGVVTPGITEDQLWRAKYVYDSAFHPDTGE R A G W R A 1 1 0 1 0 1 1 2 0 1 1 0 0 0 1 0 2 1 0 2 0 0 15 0 1640.8522 Q9BWM7 Q9BWM7 55 69 SFXN3 Sideroflexin-3 yes yes 2 5.7485E-07 158.01 By MS/MS 8 0 1 1 773680 773680 0 741 2397 764 1935 1363 1363 1 51039 0 AGYIIPLQGPGLTTTESR VTLPAPLDTINVHLRAGYIIPLQGPGLTTT IIPLQGPGLTTTESRQQPMALAVALTKGGE R A G S R Q 1 1 0 0 0 1 1 3 0 2 2 0 0 0 2 1 3 0 1 0 0 0 18 0 1872.9945 P10253 P10253 820 837 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 2 0.00025513 129.37 By MS/MS 3.5 0.5 1 1 2 903820 903820 0 742 535 765 1936;1937 1364 1364 1 24606 0 AGYPQYVSEILEK LMDRDLLQIIFSFSKAGYPQYVSEILEKVT SKAGYPQYVSEILEKVTCERRYIPDAMNLI K A G E K V 1 0 0 0 0 1 2 1 0 1 1 1 0 0 1 1 0 0 2 1 0 0 13 0 1495.7559 P42704 P42704 315 327 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.9225E-05 166.11 By MS/MS 5.14 1.81 2 1 1 1 1 1 7 28240000 28240000 0 743 854 766 1938;1939;1940;1941;1942;1943;1944 1365;1366;1367;1368;1369;1370;1371;1372 1370 8 738740 0 AGYSQQHQHR GGFPSGSVHSFSNGRAGYSQQHQHRHSGHE FSNGRAGYSQQHQHRHSGHEREEERGDGGF R A G H R H 1 1 0 0 0 3 0 1 2 0 0 0 0 0 0 1 0 0 1 0 0 0 10 0 1210.5592 Q8TBM8 Q8TBM8 223 232 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 0.006195 103.55 By MS/MS 7.5 0.5 1 1 2 177920 177920 0 744 1989 767 1945;1946 1373 1373 1 5651.8 0 AHAHLDTGR LVRWYQMGAYQPFFRAHAHLDTGRREPWLL YQPFFRAHAHLDTGRREPWLLPSQHNDIIR R A H G R R 2 1 0 1 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 976.48388 Q14697 Q14697 675 683 GANAB Neutral alpha-glucosidase AB yes yes 2 0.01145 101.64 By MS/MS 4.5 0.5 1 1 2 554770 554770 0 745 1443 768 1947;1948 1374 1374 1 15484 0 AHATGAGPAGR TAVTQALNELLQHVKAHATGAGPAGRYDQA QHVKAHATGAGPAGRYDQATDTILTVTENI K A H G R Y 4 1 0 0 0 0 0 3 1 0 0 0 0 0 1 0 1 0 0 0 0 0 11 0 964.48388 Q9Y490 Q9Y490 787 797 TLN1 Talin-1 yes yes 2 0.00091662 134.77 By MS/MS 1.5 0.5 1 1 2 400530 400530 0 746 2947 769 1949;1950 1375 1375 1 19900 0 AHEEDNTVELLR VAVLDGNVVGIVAARAHEEDNTVELLRMSV AARAHEEDNTVELLRMSVDSRFRGKGIAKA R A H L R M 1 1 1 1 0 0 3 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1424.6896 Q8N9F0 Q8N9F0 201 212 NAT8L N-acetylaspartate synthetase yes yes 2 3.3913E-05 169.52 By MS/MS 8 0 1 1 1135800 1135800 0 747 1936 770 1951 1376 1376 1 74926 0 AHEILPNLVCCSAK SVSEVIEGYEIACRKAHEILPNLVCCSAKN KAHEILPNLVCCSAKNLRDIDEVSSLLRTS K A H A K N 2 0 1 0 2 0 1 0 1 1 2 1 0 0 1 1 0 0 0 1 0 0 14 0 1610.7909 P50990 P50990 139 152 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0035553 110.15 By MS/MS 6 0 1 1 17629000 17629000 0 748 955 771 1952 1377;1378 1378 2 137470 0 AHESVVK SLVGKRAISTSVCVRAHESVVKSEDFSLPA ISTSVCVRAHESVVKSEDFSLPAYMDRRDH R A H V K S 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 7 0 768.413 P13073 P13073 23 29 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.019236 128.48 By MS/MS By matching 10 0 2 1 1 5796800 5781900 14962 749 571 772 1953;1954 1379 1379 1 6145500 383770 AHGELHEQFK LRRFMYCTPFTLDGRAHGELHEQFKRKTIL TLDGRAHGELHEQFKRKTILTTSHAFPYIK R A H F K R 1 0 0 0 0 1 2 1 2 0 1 1 0 1 0 0 0 0 0 0 0 0 10 0 1194.5782 Q96N67 Q96N67 1953 1962 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.0010774 117.31 By MS/MS 2.5 0.5 1 1 2 650380 650380 0 750 2230 773 1955;1956 1380 1380 1 28116 0 AHGFTFTR EAGINPTDHLITAYRAHGFTFTRGLSVREI HLITAYRAHGFTFTRGLSVREILAELTGRK R A H T R G 1 1 0 0 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 0 0 0 8 0 935.46135 P08559 P08559 120 127 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 3 0.039215 82.671 By MS/MS 7 0 1 1 2156800 2156800 0 751 504 774 1957 1381 1381 1 38542 0 AHGGYSVFAGVGER GKTVLIMELINNVAKAHGGYSVFAGVGERT KAHGGYSVFAGVGERTREGNDLYHEMIESG K A H E R T 2 1 0 0 0 0 1 4 1 0 0 0 0 1 0 1 0 0 1 2 0 0 14 0 1405.6739 P06576 P06576 226 239 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 0.00098878 126.83 By MS/MS By matching 6.33 0.943 1 3 1 1 5 1 77269000 77228000 40743 752 478 775 1958;1959;1960;1961;1962;1963 1382;1383 1382 2 657410 124960 AHGNVQDR LEYKQSGESIDIITRAHGNVQDRIGRPSET SIDIITRAHGNVQDRIGRPSETGIIGIIDP R A H D R I 1 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 895.42603 Q16531 Q16531 104 111 DDB1 DNA damage-binding protein 1 yes yes 2 0.014976 113.26 By MS/MS 3 1.41 1 1 1 1 1 5 610380 610380 0 753 1537 776 1964;1965;1966;1967;1968 1384;1385;1386 1384 3 23321 0 AHHAACKEEK KPWAKKLKEVEAAKKAHHAACKEEKLAISR EAAKKAHHAACKEEKLAISREANSKADPSL K A H E K L 3 0 0 0 1 0 2 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 10 1 1179.5455 Q9UNF0 Q9UNF0 158 167 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 2 0.015486 132.76 By MS/MS 6 0 1 1 0 0 0 754 2839 777 1969 1387 1387 1 0 0 AHHAAGQSVR RSRSDIDVNAAAGAKAHHAAGQSVRSGRLG AAGAKAHHAAGQSVRSGRLGAGALNAGSYA K A H V R S 3 1 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 1 0 0 10 0 1032.5213 O75122 O75122 382 391 CLASP2 CLIP-associating protein 2 yes yes 3 0.00041419 125.97 By MS/MS 4 0.816 1 1 1 3 135210 135210 0 755 279 778 1970;1971;1972 1388 1388 1 3722.8 0 AHIAQLCEK ADAILGNQMFTHYDRAHIAQLCEKAGLLQR FTHYDRAHIAQLCEKAGLLQRALEHFTDLY R A H E K A 2 0 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1068.5386 Q00610;P53675 Q00610 611 619 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.0010883 140.14 By MS/MS By matching 3 0.707 1 2 1 3 1 1504500 1475500 28940 756 1235 779 1973;1974;1975;1976 1389;1390 1390 2 45130 41477 AHIISDQK SMLPSIWDMGLELFRAHIISDQKVQNKTID MGLELFRAHIISDQKVQNKTIDGILLLIER R A H Q K V 1 0 0 1 0 1 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 0 8 0 910.48723 Q13620 Q13620 334 341 CUL4B Cullin-4B yes yes 2 0.014636 113.7 By MS/MS 4.5 0.5 1 1 2 993410 993410 0 757 1390 780 1977;1978 1391;1392 1391 2 31467 0 AHLGTALK SHRRDQKWHDKQYKKAHLGTALKANPFGGA HDKQYKKAHLGTALKANPFGGASHAKGIVL K A H L K A 2 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 809.47594 P62266 P62266 30 37 RPS23 40S ribosomal protein S23 yes yes 2 0.018973 108.09 By MS/MS By matching 10 0 2 1 1 820310 777980 42328 758 1123 781 1979;1980 1393 1393 1 826910 1085700 AHPAAEEEDDPDRPIEFSSSK WASRSLHPLPGSRDRAHPAAEEEDDPDRPI EEDDPDRPIEFSSSKANPHRWSVGHTMGKG R A H S K A 3 1 0 3 0 0 4 0 1 1 0 1 0 1 3 3 0 0 0 0 0 0 21 1 2326.0349 Q4G0I0 Q4G0I0 36 56 CCSMST1 Protein CCSMST1 yes yes 4 0.0032026 73.735 By MS/MS 9.5 0.5 1 1 2 514990 514990 0 759 1576 782 1981;1982 1394 1394 1 505950 0 AHPVFYQGTYSQALNDAK DIVSFMHSFEEKYGRAHPVFYQGTYSQALN VFYQGTYSQALNDAKRELRFLLVYLHGDDH R A H A K R 3 0 1 1 0 2 0 1 1 0 1 1 0 1 1 1 1 0 2 1 0 0 18 0 2008.9643 Q96CS3 Q96CS3 150 167 FAF2 FAS-associated factor 2 yes yes 2;3 5.2138E-11 165.89 By MS/MS 7.2 1.17 2 1 1 1 5 45613000 45613000 0 760 2140 783 1983;1984;1985;1986;1987 1395;1396 1395 2 426170 0 AHQLVHEGYK TNEFVHINNLKLICRAHQLVHEGYKFMFDE KLICRAHQLVHEGYKFMFDEKLVTVWSAPN R A H Y K F 1 0 0 0 0 1 1 1 2 0 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1180.5989 O00743 O00743 236 245 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 3 0.0023788 99.973 By MS/MS 8 0 1 1 287510 287510 0 761 106 784 1988 1397 1397 1 18967 0 AHQSYCHSNK FSGFESCSNGVISNKAHQSYCHSNKHQSSN VISNKAHQSYCHSNKHQSSNLNVPELNSIN K A H N K H 1 0 1 0 1 1 0 0 2 0 0 1 0 0 0 2 0 0 1 0 0 0 10 0 1230.52 Q96S59 Q96S59 522 531 RANBP9 Ran-binding protein 9 yes yes 2 0.0060521 104.01 By MS/MS 4 0 1 1 56057 56057 0 762 2254 785 1989 1398 1398 1 1530.3 0 AHQVVEDGYEFFAK VAKFLHKHDLDLICRAHQVVEDGYEFFAKR RAHQVVEDGYEFFAKRQLVTLFSAPNYCGE R A H A K R 2 0 0 1 0 1 2 1 1 0 0 1 0 2 0 0 0 0 1 2 0 0 14 0 1638.7678 P36873;P62136;P62140 P62136 247 260 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2;3 9.5283E-05 148.68 By MS/MS 8 0 2 2 1906400 1906400 0 763 1114;810;1115 786 1990;1991 1399;1400 1399 2 125770 0 AHSGAQGLLAAQK GTLNLSVLLPLGLRKAHSGAQGLLAAQKAR RKAHSGAQGLLAAQKARGLFKDFFPETGTK K A H Q K A 4 0 0 0 0 2 0 2 1 0 2 1 0 0 0 1 0 0 0 0 0 0 13 0 1250.6731 Q9Y2Z4 Q9Y2Z4 31 43 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2;3 7.5388E-12 205.52 By MS/MS 6.67 0.471 1 2 3 18350000 18350000 0 764 2909 787 1992;1993;1994 1401;1402 1401 2 322190 0 AHSSHLK ELKDAQAGKEPGGSRAHSSHLKSKKGQSTS GKEPGGSRAHSSHLKSKKGQSTSRHKKLMF R A H L K S 1 0 0 0 0 0 0 0 2 0 1 1 0 0 0 2 0 0 0 0 0 0 7 0 778.40859 P04637 P04637 364 370 TP53 Cellular tumor antigen p53 yes yes 2 0.023342 119.56 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 1346600 1346600 0 765 455 788 1995;1996;1997;1998;1999;2000 1403 1403 1 49286 0 AHSSMVGVNLPQK LGDVYVNDAFGTAHRAHSSMVGVNLPQKAG HRAHSSMVGVNLPQKAGGFLMKKELNYFAK R A H Q K A 1 0 1 0 0 1 0 1 1 0 1 1 1 0 1 2 0 0 0 2 0 0 13 0 1366.7027 P00558 P00558 172 184 PGK1 Phosphoglycerate kinase 1 yes yes 2;3 0.00020947 142.83 By MS/MS 7 0 2 2 2419200 2419200 0 766 432 789 2001;2002 1404;1405 1405 228 2 43232 0 AHTPQVHK PYWEKDIIKMLGLEKAHTPQVHKNIPSVNA KMLGLEKAHTPQVHKNIPSVNAKLKVVKHL K A H H K N 1 0 0 0 0 1 0 0 2 0 0 1 0 0 1 0 1 0 0 1 0 0 8 0 916.4879 Q8TCC3 Q8TCC3 94 101 MRPL30 39S ribosomal protein L30, mitochondrial yes yes 3 0.010511 119.41 By MS/MS 10 0 1 1 158140 158140 0 767 1993 790 2003 1406 1406 1 168090 0 AHYNSSNK TEPNSGSDPSSMETRAHYNSSNKSYTLNGT PSSMETRAHYNSSNKSYTLNGTKTWITNSP R A H N K S 1 0 2 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 1 0 0 0 8 0 919.41479 Q92947 Q92947 195 202 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes yes 2 0.0052244 136.27 By MS/MS 7 0 1 1 282700 282700 0 768 2092 791 2004 1407 1407 1 5051.9 0 AIACLLFGGSR KSIAPSIFGGTDMKKAIACLLFGGSRKRLP DMKKAIACLLFGGSRKRLPDGLTRRGDINL K A I S R K 2 1 0 0 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1163.6121 P33992 P33992 352 362 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00078207 136.57 By MS/MS 4 1.87 1 1 1 1 4 1582400 1582400 0 769 774 792 2005;2006;2007;2008 1408;1409;1410 1409 3 34376 0 AIACVVTACSAELEK GLAGRTWAGKEELLKAIACVVTACSAELEK AIACVVTACSAELEKSVPNQPSTNEILQAV K A I E K S 4 0 0 0 2 0 2 0 0 1 1 1 0 0 0 1 1 0 0 2 0 0 15 0 1620.7851 Q5VYK3 Q5VYK3 1591 1605 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 1.3046E-08 216.03 By MS/MS 3 0.816 1 1 1 3 3636100 3636100 0 770 1657 793 2009;2010;2011 1411;1412 1412 2 105060 0 AIADCENIR KLEKEVQDLTVRYQRAIADCENIRRRTQRC TVRYQRAIADCENIRRRTQRCVEDAKIFGI R A I I R R 2 1 1 1 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1060.4971 Q8TAA5 Q8TAA5 83 91 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.043917 91.069 By MS/MS 9 0 1 1 0 0 0 771 1979 794 2012 1413 1413 1 0 0 AIADTGANVVVTGGK NFSKGEENLMDAQVKAIADTGANVVVTGGK AIADTGANVVVTGGKVADMALHYANKYNIM K A I G K V 3 0 1 1 0 0 0 3 0 1 0 1 0 0 0 0 2 0 0 3 0 0 15 0 1371.7358 P50990 P50990 282 296 CCT8 T-complex protein 1 subunit theta yes yes 2 1.3287E-20 223.36 By MS/MS By MS/MS 5.18 2.37 1 1 1 1 1 3 1 1 1 10 1 673820000 673360000 455950 772 955 795 2013;2014;2015;2016;2017;2018;2019;2020;2021;2022;2023 1414;1415;1416;1417;1418;1419;1420;1421;1422;1423 1418 10 6844900 1398400 AIAELGIYPAVDPLDSTSR ATTFAHLDATTVLSRAIAELGIYPAVDPLD LGIYPAVDPLDSTSRIMDPNIVGSEHYDVA R A I S R I 3 1 0 2 0 0 1 1 0 2 2 0 0 0 2 2 1 0 1 1 0 0 19 0 1987.0262 P06576 P06576 388 406 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 2.0477E-07 146.67 By MS/MS By MS/MS 6.65 1.81 1 1 1 6 4 1 1 2 16 1 267670000 267560000 114210 773 478 796 2024;2025;2026;2027;2028;2029;2030;2031;2032;2033;2034;2035;2036;2037;2038;2039;2040 1424;1425;1426;1427;1428;1429;1430;1431;1432;1433;1434;1435;1436 1427 12 3331000 350280 AIAFLQQPR IKFEGAIYRKDVGFRAIAFLQQPRSLTYKE KDVGFRAIAFLQQPRSLTYKESGVDIAAGN R A I P R S 2 1 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 1042.5924 P22102 P22102 425 433 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.0010958 152.63 By MS/MS 4 0 1 1 1571200 1571200 0 774 655 797 2041 1437 1437 1 42893 0 AIAGDEHKR YQECNKIVKQKAFERAIAGDEHKRSVVDSL QKAFERAIAGDEHKRSVVDSLDIESMTIED R A I K R S 2 1 0 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 9 1 995.51484 P53041;E7EU14 P53041 151 159 PPP5C;PPP5D1 Serine/threonine-protein phosphatase 5;Protein PPP5D1 yes no 2 0.00034144 171.38 By MS/MS By matching 6.33 0.471 2 1 2 1 1012300 956740 55556 775 997 798 2042;2043;2044 1438 1438 1 7947.3 170390 AIAINTFLPK KTFQGKPIKARIKAKAIAINTFLPKNGFRP RIKAKAIAINTFLPKNGFRPLDVSLYAQQR K A I P K N 2 0 1 0 0 0 0 0 0 2 1 1 0 1 1 0 1 0 0 0 0 0 10 0 1086.6437 Q92615 Q92615 312 321 LARP4B La-related protein 4B yes yes 2 0.00066869 145.72 By MS/MS 4.5 0.5 1 1 2 326930 326930 0 776 2067 799 2045;2046 1439 1439 1 9711.6 0 AIANECQANFISIK LFYGPPGCGKTLLAKAIANECQANFISIKG KAIANECQANFISIKGPELLTMWFGESEAN K A I I K G 3 0 2 0 1 1 1 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 14 0 1577.7872 P55072 P55072 530 543 VCP Transitional endoplasmic reticulum ATPase yes yes 2 4.8549E-18 222.25 By MS/MS By matching 4.75 0.829 2 1 1 3 1 11147000 11129000 17846 777 1026 800 2047;2048;2049;2050 1440;1441 1440 2 316970 37292 AICLDHAK MKLMPPDSTTIEKLRAICLDHAKLGESSLS TTIEKLRAICLDHAKLGESSLSPSLDSLFF R A I A K L 2 0 0 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 926.46439 Q93008 Q93008 1059 1066 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0053384 135.84 By MS/MS 2 0.816 1 1 1 3 1664800 1664800 0 778 2096 801 2051;2052;2053 1442 1442 1 76353 0 AICTEAGLMALR DLIMAKDDLSGADIKAICTEAGLMALRERR DIKAICTEAGLMALRERRMKVTNEDFKKSK K A I L R E 3 1 0 0 1 0 1 1 0 1 2 0 1 0 0 0 1 0 0 0 0 0 12 0 1304.6581 P62191 P62191 397 408 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.009116 104.42 By MS/MS 6 0 1 1 0 0 0 779 1116 802 2054 1443 1443 866 1 0 0 AIDENNEPTACFLIR WGPGPGGCLQTLLHRAIDENNEPTACFLIR AIDENNEPTACFLIRSGCDVNSPRQPGANG R A I I R S 2 1 2 1 1 0 2 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 15 0 1761.8356 Q9P2R3 Q9P2R3 732 746 ANKFY1 Rabankyrin-5 yes yes 2 8.5986E-10 182.02 By MS/MS 4 0.816 1 1 1 3 2680800 2680800 0 780 2740 803 2055;2056;2057 1444 1444 1 74902 0 AIDGLNLLPTLLQGR TTSLALAGLTPPSDRAIDGLNLLPTLLQGR AIDGLNLLPTLLQGRLMDRPIFYYRGDTLM R A I G R L 1 1 1 1 0 1 0 2 0 1 5 0 0 0 1 0 1 0 0 0 0 0 15 0 1592.925 P34059 P34059 362 376 GALNS N-acetylgalactosamine-6-sulfatase yes yes 2 0.0080211 97.463 By MS/MS 6 0 1 1 174000 174000 0 781 776 804 2058 1445 1445 1 1356.8 0 AIDLFTDAIK KVAAIEALNDGELQKAIDLFTDAIKLNPRL GELQKAIDLFTDAIKLNPRLAILYAKRASV K A I I K L 2 0 0 2 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1105.6019 P50502;Q8IZP2;Q8NFI4 P50502 133 142 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 2 0.0045335 108.98 By MS/MS 6.5 0.5 1 1 2 2432000 2432000 0 782 948 805 2059;2060 1446 1446 1 20149 0 AIDLFTDAIKLNPR KVAAIEALNDGELQKAIDLFTDAIKLNPRL KAIDLFTDAIKLNPRLAILYAKRASVFVKL K A I P R L 2 1 1 2 0 0 0 0 0 2 2 1 0 1 1 0 1 0 0 0 0 0 14 1 1585.8828 P50502;Q8IZP2;Q8NFI4 P50502 133 146 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 3 0.042371 60.161 By MS/MS 6 0 1 1 1520800 1520800 0 783 948 806 2061 1447 1447 1 11859 0 AIDNAADLLIFGK SFHKLRDRAERIASRAIDNAADLLIFGKEL SRAIDNAADLLIFGKELSAIGSDTTPLPSW R A I G K E 3 0 1 2 0 0 0 1 0 2 2 1 0 1 0 0 0 0 0 0 0 0 13 0 1359.7398 Q9Y5X2 Q9Y5X2 246 258 SNX8 Sorting nexin-8 yes yes 2 4.4288E-12 209.19 By MS/MS 6.5 0.5 1 1 2 1859000 1859000 0 784 2984 807 2062;2063 1448 1448 1 15889 0 AIDQEEKGK TALGVAELTVTDLFRAIDQEEKGKITFADF VTDLFRAIDQEEKGKITFADFHRFAEMYPA R A I G K I 1 0 0 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 1016.5138 Q8NF37 Q8NF37 462 470 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.010141 136.57 By MS/MS 6 0 1 1 1922100 1922100 0 785 1967 808 2064 1449 1449 1 14988 0 AIDSSNLKDDYSTAQR YFKINKLHLCKPLIRAIDSSNLKDDYSTAQ IDSSNLKDDYSTAQRVTYKYYVGRKAMFDS R A I Q R V 2 1 1 3 0 1 0 0 0 1 1 1 0 0 0 3 1 0 1 0 0 0 16 1 1782.8384 Q5JVF3 Q5JVF3 194 209 PCID2 PCI domain-containing protein 2 yes yes 3 0.007014 82.529 By MS/MS 7 0 1 1 860070 860070 0 786 1612 809 2065 1450 1450 1 15370 0 AIDTTQLFSLPK GLVPKEGALDLSGLRAIDTTQLFSLPKDFW GLRAIDTTQLFSLPKDFWEQEVRDIRSYLT R A I P K D 1 0 0 1 0 1 0 0 0 1 2 1 0 1 1 1 2 0 0 0 0 0 12 0 1332.7289 Q16822 Q16822 589 600 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 3.6024E-11 206.97 By MS/MS 5.5 0.5 1 1 2 2528700 2528700 0 787 1550 810 2066;2067 1451;1452 1452 2 45016 0 AIDYEIQR RTEVKNLNSIRFLAKAIDYEIQRQINELEN SIRFLAKAIDYEIQRQINELENGGEILNET K A I Q R Q 1 1 0 1 0 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 8 0 1006.5084 O75879 O75879 291 298 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 0.0089976 122.74 By MS/MS By matching 6 0 2 1 1 10698000 10670000 27973 788 333 811 2068;2069 1453 1453 1 83206 85791 AIECYTR KDRGNGFFKEGKYERAIECYTRGIAADGAN FKEGKYERAIECYTRGIAADGANALLPANR R A I T R G 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 7 0 911.4171 Q9H6T3 Q9H6T3 301 307 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.042442 111.82 By MS/MS 5 0 1 1 781530 781530 0 789 2512 812 2070 1454 1454 1 32124 0 AIEEGIPAFTCEEYVK LQVIFITNDRRNKEKAIEEGIPAFTCEEYV IEEGIPAFTCEEYVKSLTANPELIDRLACL K A I V K S 2 0 0 0 1 0 4 1 0 2 0 1 0 1 1 0 1 0 1 1 0 0 16 0 1854.871 Q9Y2L1 Q9Y2L1 184 199 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.011694 89.663 By MS/MS 5 1.41 1 1 1 1 1 5 6213500 6213500 0 790 2892 813 2071;2072;2073;2074;2075 1455 1455 1 145230 0 AIEEGTLEEIEEEVR EVDYSDSLTEKQWLKAIEEGTLEEIEEEVR AIEEGTLEEIEEEVRQKKSSRKRKRDSDAG K A I V R Q 1 1 0 0 0 0 7 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 15 0 1744.8367 P51532 P51532 1391 1405 SMARCA4 Transcription activator BRG1 yes yes 2 4.9178E-05 168.02 By MS/MS 2 0 1 1 59504 59504 0 791 965 814 2076 1456 1456 1 2957.7 0 AIEEIAGVGVPELINSPK ALLCIYLEHTESILKAIEEIAGVGVPELIN EIAGVGVPELINSPKDASSSTFPTLTRHTF K A I P K D 2 0 1 0 0 0 3 2 0 3 1 1 0 0 2 1 0 0 0 2 0 0 18 0 1835.004 Q9BXW9 Q9BXW9 1199 1216 FANCD2 Fanconi anemia group D2 protein yes yes 2 0.009157 83.243 By MS/MS 3 0 1 1 438000 438000 0 792 2405 815 2077 1457 1457 1 11434 0 AIEINPDSAQPYK VKLQKPNAAIRDCDRAIEINPDSAQPYKWR DRAIEINPDSAQPYKWRGKAHRLLGHWEEA R A I Y K W 2 0 1 1 0 1 1 0 0 2 0 1 0 0 2 1 0 0 1 0 0 0 13 0 1444.7198 P50502;Q8IZP2;Q8NFI4 P50502 174 186 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 2 0.023507 93.959 By MS/MS 6 0 1 1 3573500 3573500 0 793 948 816 2078 1458 1458 1 27867 0 AIELLQEFSDQHPENAAEIK LIQAAQLCREKQHTKAIELLQEFSDQHPEN QEFSDQHPENAAEIKLTMAQLKISQGNISK K A I I K L 3 0 1 1 0 2 4 0 1 2 2 1 0 1 1 1 0 0 0 0 0 0 20 0 2281.1226 O76094 O76094 357 376 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.0050815 75.239 By MS/MS 5 0 1 1 931820 931820 0 794 346 817 2079 1459 1459 1 38302 0 AIEMLGGELGSK GTQTNMNVNEVISNRAIEMLGGELGSKIPV SNRAIEMLGGELGSKIPVHPNDHVNKSQSS R A I S K I 1 0 0 0 0 0 2 3 0 1 2 1 1 0 0 1 0 0 0 0 0 0 12 0 1203.6169 P07954 P07954 161 172 FH Fumarate hydratase, mitochondrial yes yes 2 0.0084682 94.363 By MS/MS 7 0 1 1 748980 748980 0 795 496 818 2080 1460 1460 295 1 13384 0 AIEQADLLQEEAETPR LGGEVQETSKKNVLKAIEQADLLQEEAETP IEQADLLQEEAETPRSVLEEIGLT______ K A I P R S 3 1 0 1 0 2 4 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 16 0 1811.8901 P56377 P56377 133 148 AP1S2 AP-1 complex subunit sigma-2 yes yes 2 5.706E-39 265.77 By MS/MS 9 0 1 1 368710 368710 0 796 1043 819 2081 1461 1461 1 211610 0 AIETTDIISR LGLKFNKIVHSSMTRAIETTDIISRHLPGV SSMTRAIETTDIISRHLPGVCKVSTDLLRE R A I S R H 1 1 0 1 0 0 1 0 0 3 0 0 0 0 0 1 2 0 0 0 0 0 10 0 1117.5979 Q96HS1 Q96HS1 153 162 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.00029365 153.05 By MS/MS 7 3.54 1 1 1 1 4 96470000 96470000 0 797 2196 820 2082;2083;2084;2085 1462;1463;1464;1465 1463 4 9342500 0 AIFLAAQK KDLSSEELAAFQKERAIFLAAQKEADLAAQ AAFQKERAIFLAAQKEADLAAQEEAAKK__ R A I Q K E 3 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 860.51199 Q9Y3B7 Q9Y3B7 172 179 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.0072377 128.75 By MS/MS 9 0 1 1 3277800 3277800 0 798 2927 821 2086 1466 1466 1 1881200 0 AIFLAAQKEADLAAQEEAAK KDLSSEELAAFQKERAIFLAAQKEADLAAQ AQKEADLAAQEEAAKK______________ R A I A K K 8 0 0 1 0 2 3 0 0 1 2 2 0 1 0 0 0 0 0 0 0 0 20 1 2087.0899 Q9Y3B7 Q9Y3B7 172 191 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2;3 1.9664E-05 163.62 By MS/MS 9 0 2 2 1175600 1175600 0 799 2927 822 2087;2088 1467;1468 1467 2 674660 0 AIFLFVDK FMWIIRKRIQLPSEKAIFLFVDKTVPQSSL IQLPSEKAIFLFVDKTVPQSSLTMGQLYEK K A I D K T 1 0 0 1 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 1 0 0 8 0 951.54295 P60520 P60520 75 82 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 2 0.02209 109.86 By MS/MS 10 0 1 1 789930 789930 0 800 1068 823 2089 1469 1469 1 839610 0 AIFQEVHVQSLPQVDR LCVALPPGLAVSVLKAIFQEVHVQSLPQVD IFQEVHVQSLPQVDRHTVYNIITNFMRTRE K A I D R H 1 1 0 1 0 3 1 0 1 1 1 0 0 1 1 1 0 0 0 3 0 0 16 0 1864.9795 Q96T76 Q96T76 133 148 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 3 0.014139 77.051 By MS/MS 4 0 1 1 1474100 1474100 0 801 2261 824 2090 1470 1470 1 40242 0 AIFQQPPVGVR LILPVHSNIPMMDQKAIFQQPPVGVRKIVL MDQKAIFQQPPVGVRKIVLATNIAETSITI K A I V R K 1 1 0 0 0 2 0 1 0 1 0 0 0 1 2 0 0 0 0 2 0 0 11 0 1210.6822 Q7L2E3 Q7L2E3 715 725 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0018319 122.52 By MS/MS 4 0.816 1 1 1 3 11751000 11751000 0 802 1763 825 2091;2092;2093 1471;1472;1473 1471 3 333260 0 AIFQTIQNR IDDEDNPVDEYQIFKAIFQTIQNRNPVWYQ EYQIFKAIFQTIQNRNPVWYQALTHGLNEE K A I N R N 1 1 1 0 0 2 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 9 0 1089.5931 O95373 O95373 964 972 IPO7 Importin-7 yes yes 2 7.3585E-09 212.58 By MS/MS 4 0 1 1 5694400 5694400 0 803 388 826 2094 1474;1475 1474 2 155450 0 AIFSVYVVNK ______________________________ ______________________________ M A I N K A 1 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 1 3 0 0 10 0 1138.6386 Q9Y296 Q9Y296 2 11 TRAPPC4 Trafficking protein particle complex subunit 4 yes yes 2 4.1019E-05 164.57 By MS/MS 9 0 1 1 33278 33278 0 804 2881 827 2095 1476 1476 1 19098 0 AIFTGYYGK NGRWMLTLAKNMEVRAIFTGYYGKGKPVPT KNMEVRAIFTGYYGKGKPVPTQGSRKGGAL R A I G K G 1 0 0 0 0 0 0 2 0 1 0 1 0 1 0 0 1 0 2 0 0 0 9 0 1018.5124 P09543 P09543 392 400 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.016646 98.629 By MS/MS 7 0 1 1 4108200 4108200 0 805 516 828 2096 1477 1477 1 73414 0 AIGDGEDEMLFTR GWLRRSRFEQFCHLRAIGDGEDEMLFTRRF LRAIGDGEDEMLFTRRFVTPSEPVAHSRRG R A I T R R 1 1 0 2 0 0 2 2 0 1 1 0 1 1 0 0 1 0 0 0 0 0 13 0 1452.6555 O14654 O14654 385 397 IRS4 Insulin receptor substrate 4 yes yes 2 2.3311E-18 230.95 By MS/MS 2.67 1.25 2 2 2 6 2025700 2025700 0 806 118 829;830 2097;2098;2099;2100;2101;2102 1478;1479;1480;1481 1481 78 4 60708 0 AIGGGLSSVGGGSSTIK SGLGVGGGFSSSSGRAIGGGLSSVGGGSST GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ R A I I K Y 1 0 0 0 0 0 0 6 0 2 1 1 0 0 0 4 1 0 0 1 0 0 17 0 1446.7678 CON__P02538;P02538;CON__P48668;P48668 CON__P02538 534 550 KRT6A;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C no no 2 1.2403E-33 246.63 By MS/MS By MS/MS 6.57 2.77 1 1 1 1 1 1 1 3 4 6280100 4571400 1708700 + 807 36;53 831 2103;2104;2105;2106;2107;2108;2109 1482;1483;1484;1485 1485 4 432070 4648800 AIGLLDVDVYGPSVPK AVNLALALAANDSSKAIGLLDVDVYGPSVP IGLLDVDVYGPSVPKMMNLKGNPELSQSNL K A I P K M 1 0 0 2 0 0 0 2 0 1 2 1 0 0 2 1 0 0 1 3 0 0 16 0 1641.8978 Q8TB37 Q8TB37 100 115 NUBPL Iron-sulfur protein NUBPL yes yes 2 7.0475E-06 190.66 By MS/MS 8 0 1 1 446740 446740 0 808 1987 832 2110 1486;1487 1486 2 29471 0 AIGSASEGAQSSLQEVYHK FHMDPSGTFVQCDARAIGSASEGAQSSLQE ASEGAQSSLQEVYHKSMTLKEAIKSSLIIL R A I H K S 3 0 0 0 0 2 2 2 1 1 1 1 0 0 0 4 0 0 1 1 0 0 19 0 1960.949 P28066 P28066 169 187 PSMA5 Proteasome subunit alpha type-5 yes yes 2;3 1.0788E-14 209.56 By MS/MS 8 0 2 2 15396000 15396000 0 809 712 833 2111;2112 1488;1489 1489 2 1015700 0 AIGTAYAVLSNPEK HPDKNHAPGATEAFKAIGTAYAVLSNPEKR KAIGTAYAVLSNPEKRKQYDQFGDDKSQAA K A I E K R 3 0 1 0 0 0 1 1 0 1 1 1 0 0 1 1 1 0 1 1 0 0 14 0 1432.7562 Q9NXW2 Q9NXW2 153 166 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 5.3491E-12 199.8 By MS/MS By matching 7.75 0.829 2 1 1 3 1 14135000 14120000 15315 810 2694 834 2113;2114;2115;2116 1490 1490 1 333010 62872 AIGTDEDLAHSSIR SACTSASLEPSYVLRAIGTDEDLAHSSIRF RAIGTDEDLAHSSIRFGIGRFTTEEEVDYT R A I I R F 2 1 0 2 0 0 1 1 1 2 1 0 0 0 0 2 1 0 0 0 0 0 14 0 1483.7267 Q9Y697 Q9Y697 394 407 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 1.591E-05 163.46 By MS/MS 7 0 1 1 6084600 6084600 0 811 2998 835 2117 1491 1491 1 108730 0 AIGVLTSGGDAQGMNAAVR GSLRKFLEHLSGAGKAIGVLTSGGDAQGMN LTSGGDAQGMNAAVRAVVRMGIYVGAKVYF K A I V R A 4 1 1 1 0 1 0 4 0 1 1 0 1 0 0 1 1 0 0 2 0 0 19 0 1786.8996 P17858;Q01813 Q01813 26 44 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 2 8.4295E-99 329.46 By MS/MS 4.86 2.36 1 1 2 1 1 1 7 4809000 4809000 0 812 1246;617 836;837 2118;2119;2120;2121;2122;2123;2124 1492;1493;1494;1495 1495 401 4 149890 0 AIHDKDYVK TNLGYKVLIQPSNRRAIHDKDYVKAGGILQ QPSNRRAIHDKDYVKAGGILQEDISEACLI R A I V K A 1 0 0 2 0 0 0 0 1 1 0 2 0 0 0 0 0 0 1 1 0 0 9 1 1087.5662 Q9UDR5 Q9UDR5 66 74 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 3 0.027477 92.051 By MS/MS 4 0 1 1 0 0 0 813 2762 838 2125 1496 1496 1 0 0 AIIDEFEQK SVVGKLRRGAKPEGKAIIDEFEQKLRACHT AKPEGKAIIDEFEQKLRACHTRGLDGIKEL K A I Q K L 1 0 0 1 0 1 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 9 0 1091.5499 Q15021 Q15021 1280 1288 NCAPD2 Condensin complex subunit 1 yes yes 2 0.011414 101.72 By MS/MS 3.5 0.5 1 1 2 2154000 2154000 0 814 1464 839 2126;2127 1497 1497 1 56317 0 AIIEEGDKEIATK HPSMAIIKGAGLVMKAIIEEGDKEIATKMQ MKAIIEEGDKEIATKMQELALSEGALPRHL K A I T K M 2 0 0 1 0 0 3 1 0 3 0 2 0 0 0 0 1 0 0 0 0 0 13 1 1415.7508 O75165 O75165 587 599 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0055814 134.38 By MS/MS 2.5 0.5 1 1 2 575780 575780 0 815 287 840 2128;2129 1498 1498 1 23021 0 AIIIFVPVPQLK NITAAKEIEVGGGRKAIIIFVPVPQLKSFQ GRKAIIIFVPVPQLKSFQKIQVRLVRELEK K A I L K S 1 0 0 0 0 1 0 0 0 3 1 1 0 1 2 0 0 0 0 2 0 0 12 0 1336.8482 P62081 P62081 59 70 RPS7 40S ribosomal protein S7 yes yes 2 0.012431 94.302 By MS/MS 9 0 1 1 73398 73398 0 816 1113 841 2130 1499;1500 1499 2 42124 0 AIILAAAPGEK VLQAGQYGVAQTRRRAIILAAAPGEKLPLF TRRRAIILAAAPGEKLPLFPEPLHVFAPRA R A I E K L 4 0 0 0 0 0 1 1 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1052.623 P26358 P26358 1313 1323 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.029449 84.213 By MS/MS 3.5 1.12 1 1 1 1 4 734300 734300 0 817 693 842 2131;2132;2133;2134 1501 1501 1 27160 0 AIITALGVER TASEDDNFGTAQSNKAIITALGVERRNRVL AQSNKAIITALGVERRNRVLAGLYMGRSDT K A I E R R 2 1 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1041.6182 Q92616 Q92616 1872 1881 GCN1L1 Translational activator GCN1 yes yes 2 3.922E-07 190.62 By MS/MS 2.5 1.12 1 1 1 1 4 3684400 3684400 0 818 2068 843 2135;2136;2137;2138 1502;1503;1504;1505 1503 4 157280 0 AIKNDSVVAGGGAIEMELSK ETERSLHDAIMIVRRAIKNDSVVAGGGAIE SVVAGGGAIEMELSKYLRDYSRTIPGKQQL R A I S K Y 3 0 1 1 0 0 2 3 0 2 1 2 1 0 0 2 0 0 0 2 0 0 20 1 1988.0248 Q99832 Q99832 399 418 CCT7 T-complex protein 1 subunit eta yes yes 2;3 4.9357E-40 251.04 By MS/MS 6 0 3 3 40924000 40924000 0 819 2295 844;845 2139;2140;2141 1506;1507;1508 1508 1437 3 319130 0 AILCAIQNLEER GFVEDFSEQMEIAIRAILCAIQNLEERKNE AIRAILCAIQNLEERKNEKAEENTDQASPQ R A I E R K 2 1 1 0 1 1 2 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1428.7395 Q9NU22 Q9NU22 4514 4525 MDN1 Midasin yes yes 2 0.00016625 154.24 By MS/MS 1 0 1 1 203880 203880 0 820 2635 846 2142 1509 1509 1 9961 0 AILFAVVAR ______________________________ ______________________________ M A I A R G 3 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 9 0 958.59639 P51809 P51809 2 10 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 0.0010982 139.92 By MS/MS 9 0 1 1 105480 105480 0 821 978 847 2143 1510 1510 1 60535 0 AILGATEVK LKWPTSGQLFLGHPKAILGATEVKLLGHGQ FLGHPKAILGATEVKLLGHGQPLNWISLEQ K A I V K L 2 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 900.52803 Q9BTY2 Q9BTY2 415 423 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.0080288 109.11 By MS/MS 6.5 0.5 1 1 2 8650200 8650200 0 822 2356 848 2144;2145 1511 1511 1 105890 0 AILGSVER SHDGDDKKRPVIVHRAILGSVERMIAILTE RPVIVHRAILGSVERMIAILTENYGGKWPF R A I E R M 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 843.48142 A2RTX5;P26639 P26639 592 599 TARSL2;TARS Probable threonine--tRNA ligase 2, cytoplasmic;Threonine--tRNA ligase, cytoplasmic no no 2 0.024577 101.33 By MS/MS 5 0 1 1 724210 724210 0 823 698;11 849 2146 1512 1512 1 29768 0 AILILDNDGDR ______________________________ YTVKAILILDNDGDRLFAKYYDDTYPSVKE K A I D R L 1 1 1 3 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1213.6303 P61923 P61923 15 25 COPZ1 Coatomer subunit zeta-1 yes yes 2 0.00065651 138.25 By MS/MS 9 0 1 1 1558400 1558400 0 824 1107 850 2147 1513 1513 1 894380 0 AILILDNDGDRLFAK ______________________________ AILILDNDGDRLFAKYYDDTYPSVKEQKAF K A I A K Y 2 1 1 3 0 0 0 1 0 2 3 1 0 1 0 0 0 0 0 0 0 0 15 1 1672.9148 P61923 P61923 15 29 COPZ1 Coatomer subunit zeta-1 yes yes 2 3.4221E-05 168.98 By MS/MS 9.5 0.5 1 1 2 625400 625400 0 825 1107 851 2148;2149 1514 1514 1 415940 0 AILPCIK IYAYGFEKPSAIQQRAILPCIKGYDVIAQA KPSAIQQRAILPCIKGYDVIAQAQSGTGKT R A I I K G 1 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 7 0 813.47825 P60842 P60842 62 68 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 0.03692 110.17 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 637860000 637780000 78610 826 1074 852 2150;2151;2152;2153;2154;2155 1515;1516 1516 2 9275800 241090 AILPCIKGYDVIAQAQSGTGK IYAYGFEKPSAIQQRAILPCIKGYDVIAQA KGYDVIAQAQSGTGKTATFAISILQQIELD R A I G K T 3 0 0 1 1 2 0 3 0 3 1 2 0 0 1 1 1 0 1 1 0 0 21 1 2189.1514 P60842 P60842 62 82 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 9.8025E-18 178.47 By MS/MS 6 0 2 2 71483000 71483000 0 827 1074 853 2156;2157 1517;1518 1518 2 557430 0 AILQATLREEK IIEYLKQQVSLLKEKAILQATLREEKKLRV LKEKAILQATLREEKKLRVENAKLKKEIEE K A I E K K 2 1 0 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 1 1270.7245 Q12904 Q12904 36 46 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.0020438 151.83 By MS/MS 7.5 0.5 1 1 2 1328800 1328800 0 828 1313 854 2158;2159 1519 1519 1 32220 0 AILVDLEPGTMDSVR SVYYNEATGGKYVPRAILVDLEPGTMDSVR AILVDLEPGTMDSVRSGPFGQIFRPDNFVF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 P07437;Q13885;Q9BVA1;Q13509 P07437 63 77 TUBB;TUBB2A;TUBB2B;TUBB3 Tubulin beta chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain no no 2;3 8.708E-21 223.77 By MS/MS By MS/MS 6.46 2.42 2 1 2 2 2 7 7 5 3 4 30 5 871680000 869530000 2150700 829 490;1400;2375;1377 855;856 2160;2161;2162;2163;2164;2165;2166;2167;2168;2169;2170;2171;2172;2173;2174;2175;2176;2177;2178;2179;2180;2181;2182;2183;2184;2185;2186;2187;2188;2189;2190;2191;2192;2193;2194 1520;1521;1522;1523;1524;1525;1526;1527;1528;1529;1530;1531;1532;1533;1534;1535;1536;1537;1538;1539;1540;1541;1542;1543;1544;1545;1546;1547;1548;1549;1550;1551;1552 1534 277 32 27773000 9984900 AILVVFANK KSELVAMLEEEELRKAILVVFANKQDMEQA EEELRKAILVVFANKQDMEQAMTSSEMANS K A I N K Q 2 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 2 0 0 9 0 973.59605 P40616 P40616 119 127 ARL1 ADP-ribosylation factor-like protein 1 yes yes 2 5.0355E-05 173.85 By MS/MS 9.5 0.5 1 1 2 522130 522130 0 830 830 857 2195;2196 1553;1554 1553 2 375520 0 AINCATSGVVGLVNCLR GILADEDSSRPVWLKAINCATSGVVGLVNC NCATSGVVGLVNCLRREPGGNRLRCVLLSN K A I L R R 2 1 2 0 2 0 0 2 0 1 2 0 0 0 0 1 1 0 0 3 0 0 17 0 1802.9131 P49327 P49327 1445 1461 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 5.5087E-11 209.25 By MS/MS 2.33 0.471 2 1 3 723780 723780 0 831 915 858 2197;2198;2199 1555;1556;1557;1558 1555 4 34128 0 AINQGGLTSVAVR FSPEGRLYQVEYAFKAINQGGLTSVAVRGK FKAINQGGLTSVAVRGKDCAVIVTQKKVPD K A I V R G 2 1 1 0 0 1 0 2 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1284.715 P60900 P60900 31 43 PSMA6 Proteasome subunit alpha type-6 yes yes 2 1.8686E-17 215.04 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 22032000 21968000 63846 832 1077 859 2200;2201;2202;2203 1559;1560;1561;1562 1561 4 2988000 544680 AINTAVK SIAIGSAEGFNQADKAINTAVKSGRWVMLK EGFNQADKAINTAVKSGRWVMLKNVHLAPG K A I V K S 2 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 7 0 715.42284 Q14204 Q14204 4083 4089 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.013932 143.11 By MS/MS 2 0.816 1 1 1 3 1393300 1393300 0 833 1421 860 2204;2205;2206 1563 1563 1 66563 0 AINTFFAK EVKTFQGKPIMARIKAINTFFAKNGYRLMD PIMARIKAINTFFAKNGYRLMDSSIYSHPI K A I A K N 2 0 1 0 0 0 0 0 0 1 0 1 0 2 0 0 1 0 0 0 0 0 8 0 910.49125 Q71RC2 Q71RC2 273 280 LARP4 La-related protein 4 yes yes 2 0.038612 95.815 By MS/MS 4 0 1 1 747760 747760 0 834 1752 861 2207 1564 1564 1 20413 0 AIPLAIFQAEPTVR YIISRKPEGSPVTERAIPLAIFQAEPTVRK RAIPLAIFQAEPTVRKHFLRKWLKSSSLQD R A I V R K 3 1 0 0 0 1 1 0 0 2 1 0 0 1 2 0 1 0 0 1 0 0 14 0 1524.8664 Q07864 Q07864 1093 1106 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.014607 92.247 By MS/MS 2 0.816 1 1 1 3 256810 256810 0 835 1283 862 2208;2209;2210 1565;1566 1566 2 11096 0 AIQAELLK LADLKKAQGIAPEDKAIQAELLKVKQKIKA GIAPEDKAIQAELLKVKQKIKAQKDKEKAV K A I L K V 2 0 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 884.53312 Q08752 Q08752 342 349 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.038612 95.815 By MS/MS 7.5 0.5 1 1 2 2559300 2559300 0 836 1290 863 2211;2212 1567 1567 1 49147 0 AIQASLAK LLDEATSALDTSNERAIQASLAKVCANRTT LDTSNERAIQASLAKVCANRTTIVVAHRLS R A I A K V 3 0 0 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 800.4756 Q9NP58 Q9NP58 764 771 ABCB6 ATP-binding cassette sub-family B member 6, mitochondrial yes yes 2 0.021797 104.44 By MS/MS 7.5 0.5 1 1 2 9223800 9223800 0 837 2572 864 2213;2214 1568 1568 1 272350 0 AIQDDCQVITAR AQAVLQQYQHLPSFRAIQDDCQVITARLAQ SFRAIQDDCQVITARLAQQLRQRFREGGSG R A I A R L 2 1 0 2 1 2 0 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 12 0 1388.6718 Q9UID3 Q9UID3 221 232 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.0015091 127.52 By MS/MS 4.5 0.5 1 1 2 3170300 3170300 0 838 2791 865 2215;2216 1569 1569 1 127080 0 AIQDPAFSDGIR QRAALLKSMLNFLKKAIQDPAFSDGIRHVM LKKAIQDPAFSDGIRHVMDGSLPTSLKHII K A I I R H 2 1 0 2 0 1 0 1 0 2 0 0 0 1 1 1 0 0 0 0 0 0 12 0 1288.6412 Q7Z6Z7 Q7Z6Z7 518 529 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.010785 107.09 By MS/MS 2 0.816 1 1 1 3 814730 814730 0 839 1803 866 2217;2218;2219 1570 1570 1 35551 0 AIQDTNNLKR NPFLFRQVLENFKLKAIQDTNNLKRFIRQA NFKLKAIQDTNNLKRFIRQAEMNHYALFKC K A I K R F 1 1 2 1 0 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 10 1 1171.6309 Q9HAS0 Q9HAS0 326 335 C17orf75 Protein Njmu-R1 yes yes 2 0.053465 96.665 By MS/MS 7 0 1 1 1126900 1126900 0 840 2543 867 2220 1571 1571 1 20138 0 AIQHWLTESAR RQVFKSLQEMFSGTRAIQHWLTESARLISH SGTRAIQHWLTESARLISHMGSVVEWVTPL R A I A R L 2 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 1 0 0 0 0 11 0 1310.6731 O00411 O00411 1049 1059 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00010208 161.51 By MS/MS 3.5 0.5 1 1 2 2645400 2645400 0 841 92 868 2221;2222 1572 1572 1 69330 0 AIQLEYSEAR NNEWARYLYYTGRIKAIQLEYSEARRTMTN TGRIKAIQLEYSEARRTMTNALRKAPQHTA K A I A R R 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1178.5932 O43242 O43242 297 306 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00068508 137.46 By MS/MS 6 0 1 1 7089400 7089400 0 842 187 869 2223 1573 1573 1 55283 0 AIQLNSNSVQALLLK FYSKRYSRALYLGAKAIQLNSNSVQALLLK AIQLNSNSVQALLLKGAALRNMGRVQEAII K A I L K G 2 0 2 0 0 2 0 0 0 1 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1610.9356 Q9UJX3 Q9UJX3 365 379 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2 0.00029884 130.15 By MS/MS 6 0 1 1 1716200 1716200 0 843 2803 870 2224 1574 1574 1 13383 0 AIQQLFGK NVGQDGRQALEEAQKAIQQLFGKIKDIKDK ALEEAQKAIQQLFGKIKDIKDKAEKSEQMV K A I G K I 1 0 0 0 0 2 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 903.5178 Q5VIR6 Q5VIR6 103 110 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.019569 107.32 By MS/MS 4 0 1 1 630230 630230 0 844 1645 871 2225 1575 1575 1 17205 0 AIQSNQPDR SNKDEAERCISIALKAIQSNQPDRALRFLE ISIALKAIQSNQPDRALRFLEKAQRLYPTP K A I D R A 1 1 1 1 0 2 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 9 0 1027.5047 Q9NXW2 Q9NXW2 18 26 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0023314 126.24 By MS/MS By matching 6.5 0.5 1 1 1 1 4385700 4372400 13274 845 2694 872 2226;2227 1576 1576 1 78136 40711 AIQTVSCLLQGPCDAGNR IKSWFEGQGLAGKLRAIQTVSCLLQGPCDA TVSCLLQGPCDAGNRALELSGVMESVIALC R A I N R A 2 1 1 1 2 2 0 2 0 1 2 0 0 0 1 1 1 0 0 1 0 0 18 0 1958.9302 Q9H3U1 Q9H3U1 414 431 UNC45A Protein unc-45 homolog A yes yes 2 4.7863E-11 171.36 By MS/MS 4.5 0.5 1 1 2 983160 983160 0 846 2493 873 2228;2229 1577 1577 1 27689 0 AIRDGVIEASINHEK LQLDSPEDAEFIVAKAIRDGVIEASINHEK AIRDGVIEASINHEKGYVQSKEMIDIYSTR K A I E K G 2 1 1 1 0 0 2 1 1 3 0 1 0 0 0 1 0 0 0 1 0 0 15 1 1650.8689 O43242 O43242 441 455 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.0035602 80.609 By MS/MS 5.5 0.5 1 1 2 14171000 14171000 0 847 187 874 2230;2231 1578 1578 1 119010 0 AIRPQIDLK EDPQTSREIFNFVLKAIRPQIDLKRYAVPS FNFVLKAIRPQIDLKRYAVPSAGLRLFALH K A I L K R 1 1 0 1 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 9 1 1052.6342 P78527 P78527 255 263 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0044127 105.52 By MS/MS 4 2 1 1 1 1 1 1 1 7 4867200 4867200 0 848 1197 875 2232;2233;2234;2235;2236;2237;2238 1579;1580;1581 1579 3 185670 0 AISEAQESVTK SLPPSKQANKNLILKAISEAQESVTKTTNY LILKAISEAQESVTKTTNYSTVPQKQTLPV K A I T K T 2 0 0 0 0 1 2 0 0 1 0 1 0 0 0 2 1 0 0 1 0 0 11 0 1161.5877 Q6PJT7 Q6PJT7 358 368 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 2 0.006011 100.82 By MS/MS 5 0 1 1 0 0 0 849 1718 876 2239 1582 1582 1 0 0 AISEEEEEVDPNTQNPK GEQLLSPERRTNTPKAISEEEEEVDPNTQN SEEEEEVDPNTQNPKYITAACEMVAEMVES K A I P K Y 1 0 2 1 0 1 5 0 0 1 0 1 0 0 2 1 1 0 0 1 0 0 17 0 1927.8647 P42858 P42858 2338 2354 HTT Huntingtin yes yes 2 9.1601E-11 170.95 By MS/MS 1.5 0.5 1 1 2 588630 588630 0 850 858 877 2240;2241 1583;1584 1583 2 28951 0 AISEPNFSVAYANMCR TEERLKGVIDLIFEKAISEPNFSVAYANMC ISEPNFSVAYANMCRCLMALKVPTTEKPTV K A I C R C 3 1 2 0 1 0 1 0 0 1 0 0 1 1 1 2 0 0 1 1 0 0 16 0 1828.8236 Q04637 Q04637 805 820 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 3.7311E-10 176.99 By MS/MS 2.4 1.02 1 2 1 1 5 5428000 5428000 0 851 1264 878 2242;2243;2244;2245;2246 1585;1586;1587;1588;1589 1585 1021 5 241260 0 AISEQTGKELLYK ______________________________ AKAISEQTGKELLYKFICTTSAIQNRFKYA K A I Y K F 1 0 0 0 0 1 2 1 0 1 2 2 0 0 0 1 1 0 1 0 0 0 13 1 1478.7981 P53396 P53396 5 17 ACLY ATP-citrate synthase yes yes 2 0.027428 124.6 By MS/MS 3.5 0.5 1 1 2 4401700 4401700 0 852 1001 879 2247;2248 1590 1590 1 119710 0 AISGVHTVR GTIGHVAHGKSTVVKAISGVHTVRFKNELE KSTVVKAISGVHTVRFKNELERNITIKLGY K A I V R F 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 2 0 0 9 0 938.52976 P41091;Q2VIR3 P41091 60 68 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.00092826 143.73 By MS/MS 6 0 1 1 1947700 1947700 0 853 836 880 2249 1591 1591 1 15188 0 AISHEHSPSDLEAHFVPLVK VEETVVRDKAVESLRAISHEHSPSDLEAHF HSPSDLEAHFVPLVKRLAGGDWFTSRTSAC R A I V K R 2 0 0 1 0 0 2 0 3 1 2 1 0 1 2 3 0 0 0 2 0 0 20 0 2212.1277 P30153 P30153 114 133 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 3 0.00036256 108.56 By MS/MS 6 0 1 1 3858100 3858100 0 854 737 881 2250 1592 1592 1 30086 0 AISKDHLYGTLDPNTR RLEGVEGVAHIIDPKAISKDHLYGTLDPNT ISKDHLYGTLDPNTREWTDGLFTHVLRKII K A I T R E 1 1 1 2 0 0 0 1 1 1 2 1 0 0 1 1 2 0 1 0 0 0 16 1 1799.9166 Q14204 Q14204 2258 2273 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.027926 62.709 By MS/MS 1 0 1 1 341820 341820 0 855 1421 882 2251 1593 1593 1 16700 0 AISSTEAVLNNR EGALIQFATYEEAKKAISSTEAVLNNRFIK AKKAISSTEAVLNNRFIKVYWHREGSTQQL K A I N R F 2 1 2 0 0 0 1 0 0 1 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1273.6626 Q5T8P6;Q9P2N5 Q5T8P6 586 597 RBM26;RBM27 RNA-binding protein 26;RNA-binding protein 27 yes no 2 8.6478E-05 185.61 By MS/MS 3.5 0.5 1 1 2 1660400 1660400 0 856 1633 883 2252;2253 1594 1594 1 43553 0 AITFLQSATR GIAYLVKVSEGDLRKAITFLQSATRLTGGK GDLRKAITFLQSATRLTGGKEITEKVITDI K A I T R L 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 1 2 0 0 0 0 0 10 0 1106.6084 P35249 P35249 241 250 RFC4 Replication factor C subunit 4 yes yes 2 1.6909E-10 201.33 By MS/MS 7.5 0.5 1 1 2 4071700 4071700 0 857 785 884 2254;2255 1595 1595 1 92121 0 AITGASLADIMAK EIQKKRTRRAVKFQRAITGASLADIMAKRN QRAITGASLADIMAKRNQKPEVRKAQREQA R A I A K R 4 0 0 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 0 13 0 1260.6748 P83731 P83731 81 93 RPL24 60S ribosomal protein L24 yes yes 2 2.6379E-35 266.17 By MS/MS By matching 8.5 0.5 2 2 3 1 3250300 3228000 22321 858 1213 885;886 2256;2257;2258;2259 1596;1597 1596 997 2 1722200 190430 AITGFDDPFSGK LIDFDDRQQIYAAEKAITGFDDPFSGKTVS AEKAITGFDDPFSGKTVSVSEAIKKNLIDR K A I G K T 1 0 0 2 0 0 0 2 0 1 0 1 0 2 1 1 1 0 0 0 0 0 12 0 1253.5928 P15924 P15924 2092 2103 DSP Desmoplakin yes yes 2 0.0036515 112.85 By MS/MS 2.5 1.12 1 1 1 1 4 871720 871720 0 859 603 887 2260;2261;2262;2263 1598 1598 1 33190 0 AITGIQAFTASK TYEGTHDIHALILGRAITGIQAFTASK___ LGRAITGIQAFTASK_______________ R A I S K - 3 0 0 0 0 1 0 1 0 2 0 1 0 1 0 1 2 0 0 0 0 0 12 0 1206.6608 Q92947 Q92947 427 438 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes yes 2 4.2728E-07 182.92 By MS/MS 7 0 1 1 5052900 5052900 0 860 2092 888 2264 1599 1599 1 90297 0 AITIAGVPQSVTECVK QVQVAGDMLPNSTERAITIAGVPQSVTECV ITIAGVPQSVTECVKQICLVMLETLSQSPQ R A I V K Q 2 0 0 0 1 1 1 1 0 2 0 1 0 0 1 1 2 0 0 3 0 0 16 0 1671.8866 Q15365 Q15365 145 160 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.00046779 123.26 By MS/MS 8 0.816 1 1 1 3 8516400 8516400 0 861 1490 889 2265;2266;2267 1600;1601 1600 2 323500 0 AITSAYYR IKAQIWDTAGQERYRAITSAYYRGAVGALL AGQERYRAITSAYYRGAVGALLVYDIAKHL R A I Y R G 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 2 0 0 0 8 0 943.47633 P62491;Q15907;P57735 P62491 75 82 RAB11A;RAB11B;RAB25 Ras-related protein Rab-11A;Ras-related protein Rab-11B;Ras-related protein Rab-25 yes no 2 0.0015705 163.67 By MS/MS 9 0 1 1 1008900 1008900 0 862 1136 890 2268 1602 1602 1 579030 0 AIVAESLNNTSIK VELNASDTRSKSSLKAIVAESLNNTSIKGF LKAIVAESLNNTSIKGFYSNGAASSVSTKH K A I I K G 2 0 2 0 0 0 1 0 0 2 1 1 0 0 0 2 1 0 0 1 0 0 13 0 1358.7405 P35251 P35251 688 700 RFC1 Replication factor C subunit 1 yes yes 2 1.7234E-05 170.52 By MS/MS 3.5 0.5 1 1 2 1428100 1428100 0 863 787 891 2269;2270 1603 1603 1 37520 0 AIVAGDQNVEYK CTTREDSPKCKGCFKAIVAGDQNVEYKGTV CFKAIVAGDQNVEYKGTVWHKDCFTCSNCK K A I Y K G 2 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 2 0 0 12 0 1305.6565 Q13642 Q13642 107 118 FHL1 Four and a half LIM domains protein 1 yes yes 2 1.4147E-07 191.4 By MS/MS By MS/MS 6.33 3.5 1 1 2 1 1 5 1 15144000 15099000 44297 864 1394 892 2271;2272;2273;2274;2275;2276 1604;1605;1606;1607;1608 1606 5 1611600 377910 AIVAIENPADVSVISSR INLKRTWEKLLLAARAIVAIENPADVSVIS VAIENPADVSVISSRNTGQRAVLKFAAATG R A I S R N 3 1 1 1 0 0 1 0 0 3 0 0 0 0 1 3 0 0 0 3 0 0 17 0 1739.9418 P08865 P08865 64 80 RPSA 40S ribosomal protein SA yes yes 2;3 2.5522E-18 198.48 By MS/MS By MS/MS 7.38 1.49 1 1 3 1 1 1 7 1 33511000 33422000 88506 865 509 893 2277;2278;2279;2280;2281;2282;2283;2284 1609;1610;1611;1612;1613;1614 1610 6 1157900 363330 AIVDCIISIVEENPESK LSNMLRDDGGFEYKRAIVDCIISIVEENPE VDCIISIVEENPESKEAGLAHLCEFIEDCE R A I S K E 1 0 1 1 1 0 3 0 0 4 0 1 0 0 1 2 0 0 0 2 0 0 17 0 1914.9608 Q9UBF2 Q9UBF2 416 432 COPG2 Coatomer subunit gamma-2 yes yes 2;3 0.0093685 105.66 By MS/MS 5 0.816 1 1 1 3 344150 344150 0 866 2748 894 2285;2286;2287 1615;1616;1617 1617 3 6430.9 0 AIVFVVDSAAFQR SLRLQFLERFKSSARAIVFVVDSAAFQREV ARAIVFVVDSAAFQREVKDVAEFLYQVLID R A I Q R E 3 1 0 1 0 1 0 0 0 1 0 0 0 2 0 1 0 0 0 3 0 0 13 0 1421.7667 Q9Y5M8 Q9Y5M8 138 150 SRPRB Signal recognition particle receptor subunit beta yes yes 2 3.6289E-05 185.08 By MS/MS 9 0 1 1 269570 269570 0 867 2976 895 2288 1618 1618 1 154710 0 AIVLAAIFR GQRLAHISTDPRLAKAIVLAAIFRCLHPLL DPRLAKAIVLAAIFRCLHPLLVVVSCLTRD K A I F R C 3 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 0 0 1 0 0 9 0 972.61204 Q7L2E3 Q7L2E3 886 894 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0010982 139.92 By MS/MS 3.5 0.5 1 1 2 150540 150540 0 868 1763 896 2289;2290 1619;1620 1619 2 3987.2 0 AIVQGQGER ERPLEARHAVLALLKAIVQGQGERLGVLRA VLALLKAIVQGQGERLGVLRALFFKVIKDY K A I E R L 1 1 0 0 0 2 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 956.50394 P49815 P49815 107 115 TSC2 Tuberin yes yes 2 0.020116 96.668 By MS/MS 2 0.816 1 1 1 3 232470 232470 0 869 935 897 2291;2292;2293 1621 1621 1 10268 0 AIVQQWLEYR QANKEYLLGSTAEEKAIVQQWLEYRVTQVD TAEEKAIVQQWLEYRVTQVDGHSSKNDIHT K A I Y R V 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 10 0 1304.6877 O43324 O43324 69 78 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.00022214 155.84 By MS/MS 9.5 0.5 1 1 2 1038900 1038900 0 870 194 898 2294;2295 1622 1622 1 638910 0 AIVWGMQTR SLQGKSTTLFSRHTKAIVWGMQTRAVQGML FSRHTKAIVWGMQTRAVQGMLDFDYVCSRD K A I T R A 1 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 9 0 1060.5488 P53396 P53396 499 507 ACLY ATP-citrate synthase yes yes 2 0.0004321 150.4 By MS/MS 3.5 0.5 1 1 2 7657800 7657800 0 871 1001 899 2296;2297 1623 1623 755 1 208620 0 AIVWLQNR TRQLYFTCTAFGASRAIVWLQNRREATVER TAFGASRAIVWLQNRREATVERTRTTSSVR R A I N R R 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 8 0 998.56615 Q9ULT8 Q9ULT8 2094 2101 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0112 117.7 By MS/MS 2 0 1 1 0 0 0 872 2826 900 2298 1624 1624 1 0 0 AIWGYCDQLK LHETQPPSVRISAVRAIWGYCDQLKVSEST ISAVRAIWGYCDQLKVSESTHVLQPFLPSI R A I L K V 1 0 0 1 1 1 0 1 0 1 1 1 0 0 0 0 0 1 1 0 0 0 10 0 1252.591 Q96P70 Q96P70 540 549 IPO9 Importin-9 yes yes 2 0.0096415 104.2 By MS/MS 4 0.816 1 1 1 3 1374100 1374100 0 873 2237 901 2299;2300;2301 1625 1625 1 39066 0 AIYDFTDTVIR QELLDFKDKSAEDAKAIYDFTDTVIRIRNR EDAKAIYDFTDTVIRIRNRHNDVIPTMAQG K A I I R I 1 1 0 2 0 0 0 0 0 2 0 0 0 1 0 0 2 0 1 1 0 0 11 0 1312.6663 Q15118 Q15118 134 144 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 1.4714E-09 195.57 By MS/MS 6.5 0.5 1 1 2 3977900 3977900 0 874 1479 902 2302;2303 1626 1626 1 69016 0 AIYFDGDFGQIVR LEGNFKGIVDLIEERAIYFDGDFGQIVRYG ERAIYFDGDFGQIVRYGEIPAELRAAATDH R A I V R Y 1 1 0 2 0 1 0 2 0 2 0 0 0 2 0 0 0 0 1 1 0 0 13 0 1499.7409 Q96RP9 Q96RP9 222 234 GFM1 Elongation factor G, mitochondrial yes yes 2 1.503E-11 215.83 By MS/MS 5.5 0.957 1 2 2 1 6 6192900 6192900 0 875 2247 903 2304;2305;2306;2307;2308;2309 1627;1628 1627 2 96665 0 AIYQATYR SYDLEVEQAYDLARRAIYQATYRDAYSGGA AYDLARRAIYQATYRDAYSGGAVNLYHVRE R A I Y R D 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 8 0 984.50288 P28074 P28074 218 225 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.00077635 176.41 By MS/MS 9.5 0.5 1 1 2 3209500 3209500 0 876 715 904 2310;2311 1629 1629 1 1886100 0 AIYQVYNALQEK GTDFFDKDGVMKDIRAIYQVYNALQEKVQA DIRAIYQVYNALQEKVQAVCADVEKSERVV R A I E K V 2 0 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 0 2 1 0 0 12 0 1438.7456 Q15018 Q15018 208 219 FAM175B BRISC complex subunit Abro1 yes yes 2 6.2125E-07 175.49 By MS/MS 6 0 1 1 1662300 1662300 0 877 1461 905 2312 1630 1630 1 12963 0 AIYSLCDLSR TSVLTKDDWWNLLLKAIYSLCDLSRFQEAE NLLLKAIYSLCDLSRFQEAELLVDSSLEYY K A I S R F 1 1 0 1 1 0 0 0 0 1 2 0 0 0 0 2 0 0 1 0 0 0 10 0 1196.586 Q9Y5Q9 Q9Y5Q9 632 641 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 0.00010844 164.68 By MS/MS 4 0 1 1 518620 518620 0 878 2978 906 2313 1631 1631 1 14158 0 AKAPIQDIWYHEDR LREPVFQRPRVRYGKAKAPIQDIWYHEDRI KAKAPIQDIWYHEDRIRAKFYSVYGSGQRA K A K D R I 2 1 0 2 0 1 1 0 1 2 0 1 0 0 1 0 0 1 1 0 0 0 14 1 1740.8584 Q9Y3D9 Q9Y3D9 56 69 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 3 0.032144 63.062 By MS/MS 9 0 1 1 466980 466980 0 879 2935 907 2314 1632 1632 1 268000 0 AKDLQDELAGNSEQR ERQEQIKQRTKLELKAKDLQDELAGNSEQR AKDLQDELAGNSEQRKRLLKERQKLLEKIE K A K Q R K 2 1 1 2 0 2 2 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 15 1 1672.8016 Q9UQE7 Q9UQE7 309 323 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.018335 56.774 By MS/MS 3 0 1 1 802390 802390 0 880 2860 908 2315 1633 1633 1 20946 0 AKDPFAHLPK EEMDECEQALAAEPKAKDPFAHLPKSTFVL AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE K A K P K S 2 0 0 1 0 0 0 0 1 0 1 2 0 1 2 0 0 0 0 0 0 0 10 1 1122.6186 P26641 P26641 276 285 EEF1G Elongation factor 1-gamma yes yes 3 6.5247E-05 160.77 By MS/MS 7.5 1.12 1 1 1 1 4 81479000 81479000 0 881 700 909 2316;2317;2318;2319 1634;1635 1635 2 935840 0 AKDQQAAEANK ELLKKCHQCVETIVKAKDQQAAEANKNASI TIVKAKDQQAAEANKNASILLKELDLEKSR K A K N K N 4 0 1 1 0 2 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 11 1 1172.5786 Q8IWZ3 Q8IWZ3 1416 1426 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 0.016315 119.45 By MS/MS 2 0 1 1 20269 20269 0 882 1868 910 2320 1636 1636 1 1007.5 0 AKEDFLKK KKGSEQESVKEFLAKAKEDFLKKWESPAQN VKEFLAKAKEDFLKKWESPAQNTAHLDQFE K A K K K W 1 0 0 1 0 0 1 0 0 0 1 3 0 1 0 0 0 0 0 0 0 0 8 2 977.55458 P17612;P22694 P17612 23 30 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta yes no 3 0.045417 95.815 By MS/MS 7 0 1 1 1196800 1196800 0 883 614 911 2321 1637 1637 1 21386 0 AKEEERLNK FDRWLDESDAEMELRAKEEERLNKLRLESE AEMELRAKEEERLNKLRLESEGSPETLTNL R A K N K L 1 1 1 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 2 1115.5935 Q9P035 Q9P035 122 130 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2;3 0.0014104 166.07 By MS/MS 1.33 0.471 2 1 3 4462700 4462700 0 884 2723 912 2322;2323;2324 1638;1639;1640 1639 3 218600 0 AKEFTNVYIK RFKSRKEREAELGARAKEFTNVYIKNFGED ELGARAKEFTNVYIKNFGEDMDDERLKDLF R A K I K N 1 0 1 0 0 0 1 0 0 1 0 2 0 1 0 0 1 0 1 1 0 0 10 1 1211.655 P11940;Q13310 P11940 187 196 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2;3 0.00037494 140.17 By MS/MS 5 0 2 2 5447500 5447500 0 885 560;1353 913 2325;2326 1641;1642 1642 2 223910 0 AKELLGQGLLLR KDAHNALLDIQSSGRAKELLGQGLLLRSLQ SGRAKELLGQGLLLRSLQERNQEQEKVERR R A K L R S 1 1 0 0 0 1 1 2 0 0 5 1 0 0 0 0 0 0 0 0 0 0 12 1 1309.8082 Q99613;B5ME19 Q99613 642 653 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 3.5341E-06 181.4 By MS/MS 5.5 1.66 1 2 1 1 2 1 8 8890500 8890500 0 886 2275 914 2327;2328;2329;2330;2331;2332;2333;2334 1643;1644;1645 1644 3 236130 0 AKELQQAR RETQEREAKAEMRRKAKELQQARRDAERQG KAEMRRKAKELQQARRDAERQGKKAPGFGG K A K A R R 2 1 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 942.52468 P48444 P48444 163 170 ARCN1 Coatomer subunit delta yes yes 2 0.014177 158.07 By MS/MS 6.5 0.5 1 1 2 2082300 2082300 0 887 903 915 2335;2336 1646 1646 1 16812 0 AKESLKELSLAGNELGDEGAR GITAKGCGDLCRVLRAKESLKELSLAGNEL ELSLAGNELGDEGARLLCETLLEPGCQLES R A K A R L 3 1 1 1 0 0 4 3 0 0 4 2 0 0 0 2 0 0 0 0 0 0 21 2 2186.1179 P13489 P13489 282 302 RNH1 Ribonuclease inhibitor yes yes 3 0.0057613 60.036 By MS/MS 7 0 1 1 1434800 1434800 0 888 574 916 2337 1647 1647 1 25641 0 AKFEELNMDLFR ESFYEGEDFSETLTRAKFEELNMDLFRSTM LTRAKFEELNMDLFRSTMKPVQKVLEDSDL R A K F R S 1 1 1 1 0 0 2 0 0 0 2 1 1 2 0 0 0 0 0 0 0 0 12 1 1511.7442 P11021 P11021 325 336 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 2.8795E-10 206.36 By MS/MS 5.33 0.471 4 2 6 14979000 14979000 0 889 545 917;918 2338;2339;2340;2341;2342;2343 1648;1649;1650;1651 1651 330 4 581090 0 AKFENLCK LPEDEEEKKKMEESKAKFENLCKLMKEILD KKMEESKAKFENLCKLMKEILDKKVEKVTI K A K C K L 1 0 1 0 1 0 1 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 8 1 1008.5063 P08238;Q58FF8 P08238 558 565 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 0.015431 156.75 By MS/MS 5.2 0.748 1 2 2 5 14625000 14625000 0 890 501 919 2344;2345;2346;2347;2348 1652;1653 1652 2 478570 0 AKGSETPGATPGSK PGHTPSLRWDETPGRAKGSETPGATPGSKI RAKGSETPGATPGSKIWDPTPSHTPAGAAT R A K S K I 2 0 0 0 0 0 1 3 0 0 0 2 0 0 2 2 2 0 0 0 0 0 14 1 1286.6466 O75533 O75533 239 252 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.021597 112.84 By MS/MS 2.5 0.5 1 1 2 205100 205100 0 891 315 920 2349;2350 1654 1654 1 6025.7 0 AKHHAISAK ESKLPGDKGLVLMSRAKHHAISAKLNKPFL LVLMSRAKHHAISAKLNKPFLFDTKPLIVQ R A K A K L 3 0 0 0 0 0 0 0 2 1 0 2 0 0 0 1 0 0 0 0 0 0 9 1 961.54575 P27824 P27824 126 134 CANX Calnexin yes yes 2;3 0.0015038 159.28 By MS/MS 5.67 1.49 2 1 1 1 1 6 2912800 2912800 0 892 711 921 2351;2352;2353;2354;2355;2356 1655;1656;1657;1658 1655 4 79200 0 AKHLAAVEER VATAAAAALASAATKAKHLAAVEERKIKSL SAATKAKHLAAVEERKIKSLVALLVETQMK K A K E R K 3 1 0 0 0 0 2 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1122.6146 Q8TAQ2;Q92922 Q92922 881 890 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 3 0.032327 71.03 By MS/MS 3 0 1 1 0 0 0 893 2090;1983 922 2357 1659 1659 1 0 0 AKIELLGSYDPQK LRDLNRKSNQVKTCKAKIELLGSYDPQKQL CKAKIELLGSYDPQKQLIIEDPYYGNDSDF K A K Q K Q 1 0 0 1 0 1 1 1 0 1 2 2 0 0 1 1 0 0 1 0 0 0 13 1 1460.7875 P24666 P24666 112 124 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 0.0025347 140.63 By MS/MS 10 0 1 1 439240 439240 0 894 679 923 2358 1660 1660 1 466860 0 AKIGLIQFCLSAPK LTQKVSNSGITRVEKAKIGLIQFCLSAPKT KAKIGLIQFCLSAPKTDMDNQIVVSDYAQM K A K P K T 2 0 0 0 1 1 0 1 0 2 2 2 0 1 1 1 0 0 0 0 0 0 14 1 1544.8749 P50991 P50991 244 257 CCT4 T-complex protein 1 subunit delta yes yes 3 0.0061416 89.231 By MS/MS 6 0 1 1 2741700 2741700 0 895 956 924 2359 1661 1661 1 21380 0 AKIQDKEGIPPDQQR ITLEVEPSDTIENVKAKIQDKEGIPPDQQR AKIQDKEGIPPDQQRLIFAGKQLEDGRTLS K A K Q R L 1 1 0 2 0 3 1 1 0 2 0 2 0 0 2 0 0 0 0 0 0 0 15 2 1721.906 P62979;P0CG47;P0CG48 P62979 28 42 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 3 0.030709 69.045 By MS/MS 2.5 1.12 1 1 1 1 4 2110000 2110000 0 896 1165 925 2360;2361;2362;2363 1662;1663 1662 2 77704 0 AKKPALVAK AQLREERLRQYAEKKAKKPALVAKSSILLD QYAEKKAKKPALVAKSSILLDVKPWDDETD K A K A K S 3 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0 0 0 0 1 0 0 9 2 924.61204 P24534;P29692 P29692 187 195 EEF1B2;EEF1D Elongation factor 1-beta;Elongation factor 1-delta no no 3 0.00030757 154.49 By MS/MS 7.5 0.5 1 1 2 2042500 2042500 0 897 726;677 926 2364;2365 1664;1665 1665 2 111260 0 AKLAEQAER ______________________________ NELVQKAKLAEQAERYDDMAACMKSVTEQG K A K E R Y 3 1 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1014.5458 P27348;P31946;P31947;P63104 P63104 10 18 YWHAQ;YWHAB;SFN;YWHAZ 14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta no no 2 0.0027088 156.35 By MS/MS 8 0 1 1 860420 860420 0 898 1169;703;760;761 927 2366 1666 1666 1 56762 0 AKLDELSAK ALEYTIYNQELNETRAKLDELSAKRETSGE ELNETRAKLDELSAKRETSGEKSRQLRDAQ R A K A K R 2 0 0 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 9 1 973.54441 Q9UQE7 Q9UQE7 237 245 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0099686 120.27 By MS/MS 3 0 1 1 0 0 0 899 2860 928 2367 1667 1667 1 0 0 AKLDELSAKR ALEYTIYNQELNETRAKLDELSAKRETSGE LNETRAKLDELSAKRETSGEKSRQLRDAQQ R A K K R E 2 1 0 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 10 2 1129.6455 Q9UQE7 Q9UQE7 237 246 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.00068222 123.01 By MS/MS 3 0 1 1 366160 366160 0 900 2860 929 2368 1668 1668 1 9558.7 0 AKLEEHFKNQELR CLNNEHFEELGGILKAKLEEHFKNQELRQV LKAKLEEHFKNQELRQVKRQDEDYDEQVEE K A K L R Q 1 1 1 0 0 1 3 0 1 0 2 2 0 1 0 0 0 0 0 0 0 0 13 2 1640.8635 O00410 O00410 799 811 IPO5 Importin-5 yes yes 4 0.016278 75.088 By MS/MS 4.5 0.5 1 1 2 2103700 2103700 0 901 91 930 2369;2370 1669 1669 1 60953 0 AKLTHPGK RAPRALAAAAPASGKAKLTHPGKAILAGGL AAPASGKAKLTHPGKAILAGGLAGGIEICI K A K G K A 1 0 0 0 0 0 0 1 1 0 1 2 0 0 1 0 1 0 0 0 0 0 8 1 850.50249 P53007 P53007 20 27 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.014177 158.07 By MS/MS 8 0 1 1 1203600 1203600 0 902 996 931 2371 1670 1670 1 79399 0 AKPAEAPAAAAPK TPLFTLRKTGAAPAKAKPAEAPAAAAPKAE AKAKPAEAPAAAAPKAEPTAAAVPPPAAPI K A K P K A 7 0 0 0 0 0 1 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 13 1 1191.6612 P36957 P36957 153 165 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 3 0.021171 73.36 By matching By MS/MS 6.67 0.471 1 2 1 2 605050 460010 145040 903 812 932 2372;2373;2374 1671 1671 1 8220.5 473810 AKPLLLQLPIGEAK ASFKYAVESIREKLKAKPLLLQLPIGEAKT KAKPLLLQLPIGEAKTFKGVVDVVMKEKLL K A K A K T 2 0 0 0 0 1 1 1 0 1 4 2 0 0 2 0 0 0 0 0 0 0 14 1 1489.9232 Q969S9 Q969S9 217 230 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 3 0.0070528 108.23 By MS/MS 5.5 0.5 1 1 2 1161100 1161100 0 904 2107 933 2375;2376 1672 1672 1 21487 0 AKPYEGSILEADCDILIPAASEK EDFKLQHGSILGFPKAKPYEGSILEADCDI LEADCDILIPAASEKQLTKSNAPRVKAKII K A K E K Q 4 0 0 2 1 0 3 1 0 3 2 2 0 0 2 2 0 0 1 0 0 0 23 1 2489.236 P00367 P00367 364 386 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 3 0.025783 58.5 By MS/MS 6 0 1 1 15749000 15749000 0 905 425 934 2377 1673 1673 1 122810 0 AKTGGAYGEDLGADYNLSQVCDGK YTPKAKYHGNVMLLRAKTGGAYGEDLGADY DLGADYNLSQVCDGKVSVHVIEGDHRTLLE R A K G K V 3 0 1 3 1 1 1 5 0 0 2 2 0 0 0 1 1 0 2 1 0 0 24 1 2488.1176 P49327 P49327 2448 2471 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.00010176 84.318 By MS/MS 2.5 0.5 1 1 2 1157100 1157100 0 906 915 935 2378;2379 1674 1674 1 45074 0 AKVEQVLSLEPQHELK ______________________________ KVEQVLSLEPQHELKFRGPFTDVVTTNLKL M A K L K F 1 0 0 0 0 2 3 0 1 0 3 2 0 0 1 1 0 0 0 2 0 0 16 1 1847.0153 O95292 O95292 2 17 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 3 0.00011436 120.77 By MS/MS 8 0 1 1 1491900 1491900 0 907 381 936 2380 1675 1675 1 98417 0 AKYIYDSAFHPDTGEK QGIVPPGLTENELWRAKYIYDSAFHPDTGE KYIYDSAFHPDTGEKMILIGRMSAQVPMNM R A K E K M 2 0 0 2 0 0 1 1 1 1 0 2 0 1 1 1 1 0 2 0 0 0 16 1 1840.8632 Q9H9B4 Q9H9B4 71 86 SFXN1 Sideroflexin-1 yes yes 2;3 1.4802E-06 162.67 By MS/MS 8 0 2 2 18495000 18495000 0 908 2533 937 2381;2382 1676;1677 1677 2 1220100 0 ALAAAGYDVEK VSQERVGMSLVALKKALAAAGYDVEKNNSR ALKKALAAAGYDVEKNNSRIKLSLKSLVNK K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P22492;P16403;Q02539;P10412;P16402 P22492 69 79 HIST1H1T;HIST1H1C;HIST1H1A;HIST1H1E;HIST1H1D Histone H1t;Histone H1.2;Histone H1.1;Histone H1.4;Histone H1.3 yes no 2 0.013175 95.502 By matching By MS/MS 5.4 2.42 1 1 1 1 1 1 4 497850 277610 220240 909 537 938 2383;2384;2385;2386;2387 1678;1679;1680 1678 3 18314 663960 ALAAFLKK PGVTVKDVNQQEFVRALAAFLKKSGKLKVP NQQEFVRALAAFLKKSGKLKVPEWVDTVKL R A L K K S 3 0 0 0 0 0 0 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 8 1 860.54837 P39019 P39019 17 24 RPS19 40S ribosomal protein S19 yes yes 2 0.012485 148.28 By MS/MS By matching 10 0 2 1 1 1426000 1369000 57045 910 823 939 2388;2389 1681 1681 1 1455100 1463200 ALAAGGVGSIVR PSDNSSAMLLQWHEKALAAGGVGSIVRVLT HEKALAAGGVGSIVRVLTARKTV_______ K A L V R V 3 1 0 0 0 0 0 3 0 1 1 0 0 0 0 1 0 0 0 2 0 0 12 0 1069.6244 O15511 O15511 132 143 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 2 5.3216E-07 179.81 By MS/MS 9.5 0.5 1 1 2 1760500 1760500 0 911 179 940 2390;2391 1682 1682 1 1734900 0 ALAAQLPVLPR QFLEQGEATLSVARRALAAQLPVLPRSEVT VARRALAAQLPVLPRSEVTFLAPVTRPDKV R A L P R S 3 1 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 0 0 1 0 0 11 0 1147.7077 Q96GK7 Q96GK7 83 93 FAHD2A Fumarylacetoacetate hydrolase domain-containing protein 2A yes yes 2 0.00025689 152.63 By MS/MS 8 0 1 1 514620 514620 0 912 2184 941 2392 1683 1683 1 33950 0 ALAAVPSAGSVQR EAAGRGLQPLKLDYRALAAVPSAGSVQRVP YRALAAVPSAGSVQRVPSGAAGGKMAESPC R A L Q R V 4 1 0 0 0 1 0 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 13 0 1225.6779 Q14160 Q14160 1270 1282 SCRIB Protein scribble homolog yes yes 2 0.0032733 112.83 By MS/MS 2 0 1 1 661460 661460 0 913 1412 942 2393 1684 1684 1 32878 0 ALADDDFLTVTGK SDIAITKDMFEEALRALADDDFLTVTGKTV LRALADDDFLTVTGKTVRLL__________ R A L G K T 2 0 0 3 0 0 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 13 0 1364.6824 P33991 P33991 846 858 MCM4 DNA replication licensing factor MCM4 yes yes 2 1.3511E-12 212.82 By MS/MS 5.44 3.02 1 1 1 1 1 1 1 1 1 9 16828000 16828000 0 914 773 943 2394;2395;2396;2397;2398;2399;2400;2401;2402 1685;1686;1687;1688 1685 4 1207900 0 ALADENEFVR KFTPYVGPIIPCILKALADENEFVRDTALR PCILKALADENEFVRDTALRAGQRVISMYA K A L V R D 2 1 1 1 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1162.5619 Q92616 Q92616 1785 1794 GCN1L1 Translational activator GCN1 yes yes 2 1.1096E-10 205.83 By MS/MS 2.4 1.02 1 2 1 1 5 5615300 5615300 0 915 2068 944 2403;2404;2405;2406;2407 1689;1690;1691 1690 3 242270 0 ALADTENLR KLEEQLKETVEKYKRALADTENLRQRSQKL VEKYKRALADTENLRQRSQKLVEEAKLYGI R A L L R Q 2 1 1 1 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1001.5142 Q9HAV7 Q9HAV7 81 89 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.006825 143.73 By MS/MS 9 0 1 1 0 0 0 916 2547 945 2408 1692 1692 1 0 0 ALADVATVLGR LSPEEDLNFVTDTAKALADVATVLGRALYE DTAKALADVATVLGRALYELAGGTNFSDTV K A L G R A 3 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 2 0 0 11 0 1084.6241 Q92542 Q92542 486 496 NCSTN Nicastrin yes yes 2 0.00047645 143.7 By MS/MS 4 0.816 1 1 1 3 3140000 3140000 0 917 2056 946 2409;2410;2411 1693 1693 1 87152 0 ALAEEVEQVHR PRLKRELEDHIRKLRALAEEVEQVHRGTTI RKLRALAEEVEQVHRGTTIANVVSNSVGTT R A L H R G 2 1 0 0 0 1 3 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1279.6521 Q9BQE5 Q9BQE5 101 111 APOL2 Apolipoprotein L2 yes yes 2 4.5919E-07 187.5 By MS/MS 7 0 1 1 1660600 1660600 0 918 2316 947 2412 1694 1694 1 29676 0 ALAENSGVK YAIKKFAEAFEAIPRALAENSGVKANEVIS FEAIPRALAENSGVKANEVISKLYAVHQEG R A L V K A 2 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 887.47125 P50990 P50990 451 459 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0053783 114.89 By MS/MS By matching 5.12 2.98 1 1 1 2 1 1 1 7 1 87736000 87730000 6269.4 919 955 948 2413;2414;2415;2416;2417;2418;2419;2420 1695;1696;1697;1698 1697 4 2086700 18551 ALAENSGVKANEVISK YAIKKFAEAFEAIPRALAENSGVKANEVIS LAENSGVKANEVISKLYAVHQEGNKNVGLD R A L S K L 3 0 2 0 0 0 2 1 0 1 1 2 0 0 0 2 0 0 0 2 0 0 16 1 1628.8733 P50990 P50990 451 466 CCT8 T-complex protein 1 subunit theta yes yes 2 3.822E-05 169.4 By MS/MS 8 1.41 1 1 1 1 1 5 59740000 59740000 0 920 955 949 2421;2422;2423;2424;2425 1699;1700;1701 1699 3 703520 0 ALAEYVVQQEGAK PKLIGDRPNTYIYTKALAEYVVQQEGAKLN TKALAEYVVQQEGAKLNVAIVRPSIVGASW K A L A K L 3 0 0 0 0 2 2 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 13 0 1404.7249 Q8WVX9 Q8WVX9 209 221 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 9.4362E-12 233.13 By MS/MS By MS/MS 4.89 2.33 1 1 1 1 2 2 1 8 1 35868000 35786000 82309 921 2036 950 2426;2427;2428;2429;2430;2431;2432;2433;2434 1702;1703;1704;1705;1706;1707 1705 6 454450 252440 ALAIEEFCK IIFIPGYLSYMNGTKALAIEEFCKSLGHAC YMNGTKALAIEEFCKSLGHACIRFDYSGVG K A L C K S 2 0 0 0 1 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1079.5321 Q9NUJ1 Q9NUJ1 93 101 ABHD10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial yes yes 2 0.0053784 114.89 By MS/MS 8 0 1 1 1595100 1595100 0 922 2637 951 2435 1708 1708 1 105230 0 ALAIYEGQLGPDNPNVAR QNQGKYEAVERYYQRALAIYEGQLGPDNPN IYEGQLGPDNPNVARTKNNLASCYLKQGKY R A L A R T 3 1 2 1 0 1 1 2 0 1 2 0 0 0 2 0 0 0 1 1 0 0 18 0 1896.9694 Q9NSK0 Q9NSK0 363 380 KLC4 Kinesin light chain 4 yes yes 2 1.1246E-18 209.25 By MS/MS 5 0 1 1 1397200 1397200 0 923 2626 952 2436 1709 1709 1 57430 0 ALALAQADR LASKESRLQDLLETKALALAQADRLIAQHR DLLETKALALAQADRLIAQHRCQRTQAETE K A L D R L 4 1 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 927.51378 Q8TCG1 Q8TCG1 648 656 KIAA1524 Protein CIP2A yes yes 2 0.004006 117.89 By MS/MS 5 0.816 1 1 1 3 2173000 2173000 0 924 1994 953 2437;2438;2439 1710 1710 1 36888 0 ALALLEDEER WCRRSRGLKALRLCRALALLEDEERVVRLG LRLCRALALLEDEERVVRLGVRACDLPAWV R A L E R V 2 1 0 1 0 0 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1157.5928 A0FGR8 A0FGR8 163 172 ESYT2 Extended synaptotagmin-2 yes yes 2 9.5372E-05 166.16 By MS/MS 3.25 1.48 1 1 1 1 4 2306400 2306400 0 925 6 954 2440;2441;2442;2443 1711;1712 1711 2 70108 0 ALANESGLNFLAIK LLYGPPGCSKTMIAKALANESGLNFLAIKG KALANESGLNFLAIKGPELMNKYVGESERA K A L I K G 3 0 2 0 0 0 1 1 0 1 3 1 0 1 0 1 0 0 0 0 0 0 14 0 1459.8035 Q8NB90 Q8NB90 680 693 SPATA5 Spermatogenesis-associated protein 5 yes yes 2 5.2289E-08 185.3 By MS/MS 4 0 1 1 529060 529060 0 926 1939 955 2444 1713 1713 1 14443 0 ALANQFLAPGR KGMLQAEKLTSSSEKALANQFLAPGRVPTT SSEKALANQFLAPGRVPTTARERVPATKTV K A L G R V 3 1 1 0 0 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 11 0 1156.6353 Q9NZ43 Q9NZ43 84 94 USE1 Vesicle transport protein USE1 yes yes 2 3.2755E-07 189.82 By MS/MS 8.5 0.5 1 1 2 2605600 2605600 0 927 2706 956 2445;2446 1714 1714 1 231310 0 ALANSLACQGK KKENLKAAQEEYVKRALANSLACQGKYTPS YVKRALANSLACQGKYTPSGQAGAAASESL R A L G K Y 3 0 1 0 1 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1131.5706 P04075 P04075 332 342 ALDOA Fructose-bisphosphate aldolase A yes yes 2 4.6877E-11 209.21 By MS/MS By matching 7.75 1.48 1 1 1 1 3 1 11269000 11211000 57886 928 444 957 2447;2448;2449;2450 1715;1716 1715 2 391980 177530 ALAQALK AFLVNAARGGLVDEKALAQALKEGRIRGAA RGGLVDEKALAQALKEGRIRGAALDVHESE K A L L K E 3 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 713.44357 P56545;Q13363 P56545 280 286 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 2 0.019537 127.66 By MS/MS 6.5 0.5 1 1 2 2280100 2280100 0 929 1047;1360 958 2451;2452 1717 1717 1 32967 0 ALAQALKEGR AFLVNAARGGLVDEKALAQALKEGRIRGAA LVDEKALAQALKEGRIRGAALDVHESEPFS K A L G R I 3 1 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 1 1055.6087 P56545;Q13363 P56545 280 289 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 2 0.00071078 166.07 By MS/MS 6.5 0.5 1 1 2 3910600 3910600 0 930 1047;1360 959 2453;2454 1718 1718 1 59482 0 ALAQGYR VCDINKEMLKVGKQKALAQGYRAGLAWVLG MLKVGKQKALAQGYRAGLAWVLGDAEELPF K A L Y R A 2 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 777.41334 Q5HYK3 Q5HYK3 184 190 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.022764 121.68 By MS/MS 8 0 1 1 0 0 0 931 1602 960 2455 1719 1719 1 0 0 ALASILLQDHIR VLVQKDQHSFELDEKALASILLQDHIRDLD DEKALASILLQDHIRDLDVVVVSVAGAFRK K A L I R D 2 1 0 1 0 1 0 0 1 2 3 0 0 0 0 1 0 0 0 0 0 0 12 0 1348.7827 Q6DD88 Q6DD88 45 56 ATL3 Atlastin-3 yes yes 2 0.0032385 114.89 By MS/MS 6 0 1 1 2088300 2088300 0 932 1677 961 2456 1720 1720 1 16284 0 ALASLATATLESVVQER SGDSGGGMYVINLHKALASLATATLESVVQ ASLATATLESVVQERFGSRCARIFRLVLQK K A L E R F 4 1 0 0 0 1 2 0 0 0 3 0 0 0 0 2 2 0 0 2 0 0 17 0 1757.9523 Q9BUI4 Q9BUI4 341 357 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 2;3 2.6874E-43 318.47 By MS/MS 6 0 2 2 2898100 2898100 0 933 2364 962 2457;2458 1721;1722 1722 2 22599 0 ALAVSDLNR EFEVELERGKTLHIKALAVSDLNRAGQRQV KTLHIKALAVSDLNRAGQRQVFFELNGQLR K A L N R A 2 1 1 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 957.52434 P11498 P11498 1062 1070 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0079462 111.74 By MS/MS 3.8 1.17 1 1 1 2 5 9295100 9295100 0 934 555 963 2459;2460;2461;2462;2463 1723;1724;1725 1723 3 266500 0 ALAVVYGPHEIR AQADGSAYIEQGNTKALAVVYGPHEIRGSR NTKALAVVYGPHEIRGSRARALPDRALVNC K A L I R G 2 1 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 1 2 0 0 12 0 1323.7299 Q9NPD3 Q9NPD3 48 59 EXOSC4 Exosome complex component RRP41 yes yes 3 0.035807 69.672 By MS/MS 8 0 1 1 714280 714280 0 935 2581 964 2464 1726 1726 1 47121 0 ALAYFEQLK LLGLNPNADSDFRQRALAYFEQLKISPDAW SDFRQRALAYFEQLKISPDAWQVCAEALAQ R A L L K I 2 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1081.5808 O43592 O43592 21 29 XPOT Exportin-T yes yes 2 0.0023157 126.41 By MS/MS 4 0.816 1 1 1 3 2739700 2739700 0 936 208 965 2465;2466;2467 1727 1727 1 80320 0 ALCADEYR VVAQNMHELFLEKMRALCADEYRARCRSYS LFLEKMRALCADEYRARCRSYSISIGAHLL R A L Y R A 2 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 996.43348 O14654 O14654 330 337 IRS4 Insulin receptor substrate 4 yes yes 2 0.017255 110.31 By MS/MS 3 1.41 1 1 1 1 1 5 2705000 2705000 0 937 118 966 2468;2469;2470;2471;2472 1728;1729;1730 1728 3 81846 0 ALCATRQEPLLIGSTK GTKVGDPQELNGITRALCATRQEPLLIGST LCATRQEPLLIGSTKSNMGHPEPASGLAAL R A L T K S 2 1 0 0 1 1 1 1 0 1 3 1 0 0 1 1 2 0 0 0 0 0 16 1 1756.9506 P49327 P49327 311 326 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.033058 121.24 By MS/MS 2.5 0.5 1 1 2 399580 399580 0 938 915 967 2473;2474 1731 1731 1 15148 0 ALCDLGPWVK AYHVEREKERDPEHRALCDLGPWVKCSAAL DPEHRALCDLGPWVKCSAALASRWGRGFGL R A L V K C 1 0 0 1 1 0 0 1 0 0 2 1 0 0 1 0 0 1 0 1 0 0 10 0 1157.5903 Q8N0U8 Q8N0U8 48 57 VKORC1L1 Vitamin K epoxide reductase complex subunit 1-like protein 1 yes yes 2 0.0093051 99.802 By MS/MS 9 0.816 1 1 1 3 622470 622470 0 939 1888 968 2475;2476;2477 1732 1732 1 306730 0 ALCDPLEEVR AVLYFSESLVPTARKALCDPLEEVREAAAK PTARKALCDPLEEVREAAAKTFEQLHSTIG K A L V R E 1 1 0 1 1 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 10 0 1200.5809 Q92616 Q92616 2013 2022 GCN1L1 Translational activator GCN1 yes yes 2 0.0092866 99.815 By MS/MS 2 0.816 1 1 1 3 675200 675200 0 940 2068 969 2478;2479;2480 1733 1733 1 31482 0 ALCDVGTAISCSR ALHVKAARARDRDYRALCDVGTAISCSRVF YRALCDVGTAISCSRVFSSRWGRGFGLVEH R A L S R V 2 1 0 1 2 0 0 1 0 1 1 0 0 0 0 2 1 0 0 1 0 0 13 0 1408.6439 Q9BQB6 Q9BQB6 41 53 VKORC1 Vitamin K epoxide reductase complex subunit 1 yes yes 2 1.13E-11 201.09 By MS/MS 4.83 3.44 1 1 1 1 1 1 6 3727200 3727200 0 941 2311 970 2481;2482;2483;2484;2485;2486 1734;1735;1736;1737 1736 4 1051900 0 ALCDYKQDQK PRNPDYRSNKPIILRALCDYKQDQKIVHKG PIILRALCDYKQDQKIVHKGDECILKDNNE R A L Q K I 1 0 0 2 1 2 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1267.5867 P15924 P15924 465 474 DSP Desmoplakin yes yes 2 0.0051357 136.99 By MS/MS 1.5 0.5 1 1 2 334790 334790 0 942 603 971 2487;2488 1738 1738 1 16603 0 ALCGLDESK EKLAIAERYLVPQARALCGLDESKAKLSSD LVPQARALCGLDESKAKLSSDVLTLLIKQY R A L S K A 1 0 0 1 1 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 991.46445 P36776 P36776 680 688 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.018202 104.06 By MS/MS 4 0 1 1 0 0 0 943 809 972 2489 1739 1739 1 0 0 ALCQITDSTMLQAIER DMTGKEDNYRGPAVRALCQITDSTMLQAIE LCQITDSTMLQAIERYMKQAIVDKVPSVSS R A L E R Y 2 1 0 1 1 2 1 0 0 2 2 0 1 0 0 1 2 0 0 0 0 0 16 0 1848.9074 Q9Y678 Q9Y678 127 142 COPG1 Coatomer subunit gamma-1 yes yes 2 6.37E-64 304.08 By MS/MS 4.33 0.471 2 1 3 1676300 1676300 0 944 2996 973;974 2490;2491;2492 1740;1741 1740 1722 2 46277 0 ALCYLVLK SLLCSNLESATYSNRALCYLVLKQYTEAVK SATYSNRALCYLVLKQYTEAVKDCTEALKL R A L L K Q 1 0 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 8 0 978.55722 Q15785 Q15785 234 241 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 0.0029859 150.07 By MS/MS 8 0 1 1 1228100 1228100 0 945 1521 975 2493 1742 1742 1 81017 0 ALCYVISGQDQR SSAHLVDEEFFQRVRALCYVISGQDQRKEE RVRALCYVISGQDQRKEEGMRAVLDALLAS R A L Q R K 1 1 0 1 1 2 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 12 0 1408.6769 Q66K74 Q66K74 973 984 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.00052673 138.71 By MS/MS 3 0 1 1 756090 756090 0 946 1670 976 2494 1743 1743 1 19738 0 ALDAGLALGPSSPLLR LQAVGQLVQKEQWDRALDAGLALGPSSPLL LDAGLALGPSSPLLRSEIFKLLLAEFAQHR R A L L R S 3 1 0 1 0 0 0 2 0 0 5 0 0 0 2 2 0 0 0 0 0 0 16 0 1549.8828 Q86YV9 Q86YV9 652 667 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.01192 89.189 By MS/MS 5 0 1 1 1180500 1180500 0 947 1850 977 2495 1744 1744 1 48522 0 ALDCSSSIR DQFLVVARAVGTFARALDCSSSIRQPSLHM VGTFARALDCSSSIRQPSLHMSAAAASRDI R A L I R Q 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 9 0 1007.4706 O94776 O94776 206 214 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.0053783 114.89 By MS/MS 5 0 1 1 1555800 1555800 0 948 349 978 2496 1745 1745 1 63951 0 ALDCSSSVR DQFLVVARSVGTFARALDCSSSVRQPSLHM VGTFARALDCSSSVRQPSLHMSAAAASRDI R A L V R Q 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 9 0 993.45494 Q13330;Q9BTC8 Q13330 226 234 MTA1;MTA3 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3 yes no 2 0.023334 94.85 By MS/MS 5 0 1 1 548070 548070 0 949 1357 979 2497 1746 1746 1 22528 0 ALDDFVLGSAR ______________________________ PPLRALDDFVLGSARLAAPDPCDPQRWCHR R A L A R L 2 1 0 2 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1162.5982 O60831 O60831 11 21 PRAF2 PRA1 family protein 2 yes yes 2 0.0032132 115.23 By MS/MS 9 0 1 1 1180100 1180100 0 950 270 980 2498 1747 1747 1 677280 0 ALDDILNLK QRGTDPTYGPNGCFKALDDILNLKLVHILN PNGCFKALDDILNLKLVHILNMVTGTIHTY K A L L K L 1 0 1 2 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1013.5757 O14920 O14920 302 310 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 2 0.0027128 122.13 By MS/MS 4.5 0.5 1 1 2 197200 197200 0 951 132 981 2499;2500 1748 1748 1 7486.3 0 ALDDKNCWEK ALECGNIEIALEAAKALDDKNCWEKLGEVA LEAAKALDDKNCWEKLGEVALLQGNHQIVE K A L E K L 1 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 10 1 1277.571 P53621 P53621 667 676 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 7.649E-06 182.46 By MS/MS 3.5 0.5 1 1 2 1057600 1057600 0 952 1005 982 2501;2502 1749 1749 1 27689 0 ALDDMISTLK EQQMHPTVVISAYRKALDDMISTLKKISIP SAYRKALDDMISTLKKISIPVDISDSDMML K A L L K K 1 0 0 2 0 0 0 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 10 0 1105.5689 P49368 P49368 129 138 CCT3 T-complex protein 1 subunit gamma yes yes 2 8.6996E-11 207.68 By MS/MS 6.5 1.12 1 1 1 1 4 11523000 11523000 0 953 916 983 2503;2504;2505;2506 1750;1751 1751 2 133440 0 ALDDMISTLKK EQQMHPTVVISAYRKALDDMISTLKKISIP AYRKALDDMISTLKKISIPVDISDSDMMLN K A L K K I 1 0 0 2 0 0 0 0 0 1 2 2 1 0 0 1 1 0 0 0 0 0 11 1 1233.6639 P49368 P49368 129 139 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.018198 112.36 By MS/MS 5.8 0.748 2 2 1 5 42093000 42093000 0 954 916 984 2507;2508;2509;2510;2511 1752;1753;1754 1752 3 421420 0 ALDEATKYALER TRPVVAAGAVGLAQRALDEATKYALERKTF AQRALDEATKYALERKTFGKLLVEHQAISF R A L E R K 3 1 0 1 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 12 1 1378.7092 P11310 P11310 295 306 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 3 0.0020717 122.55 By MS/MS 7 0 1 1 4040100 4040100 0 955 552 985 2512 1755 1755 1 72198 0 ALDEGDIALLK QRKTKEDEKDDKPIRALDEGDIALLKTYGQ KPIRALDEGDIALLKTYGQSTYSRQIKQVE R A L L K T 2 0 0 2 0 0 1 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1156.634 P35998 P35998 24 34 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.00010969 160.36 By MS/MS By matching 7 0.707 1 2 1 3 1 22880000 22863000 16733 956 801 986 2513;2514;2515;2516 1756;1757;1758 1758 3 385660 68693 ALDELFEAIEQK EQYTERLQASISAFRALDELFEAIEQKQRE AFRALDELFEAIEQKQRELADYLCEDAQQL R A L Q K Q 2 0 0 1 0 1 3 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1404.7137 Q27J81 Q27J81 878 889 INF2 Inverted formin-2 yes yes 2 2.7564E-07 187.42 By MS/MS 3 0 1 1 367270 367270 0 957 1555 987 2517 1759 1759 1 9587.6 0 ALDFIASK ERGKMRVHKINNVNKALDFIASKGVKLVSI KINNVNKALDFIASKGVKLVSIGAEEIVDG K A L S K G 2 0 0 1 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 8 0 863.47527 P12814;Q08043;O43707 O43707 115 122 ACTN1;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 no no 2 0.0085868 123.72 By MS/MS 4 0.816 1 1 1 3 1636900 1636900 0 958 217;568 988 2518;2519;2520 1760 1760 1 45043 0 ALDGAFTEENR KEVANSTANLVKTIKALDGAFTEENRAQCR KTIKALDGAFTEENRAQCRAATAPLLEAVD K A L N R A 2 1 1 1 0 0 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 11 0 1221.5626 Q9Y490 Q9Y490 1545 1555 TLN1 Talin-1 yes yes 2 5.3979E-16 218.94 By MS/MS 2 0 1 1 1166700 1166700 0 959 2947 989 2521 1761;1762 1761 2 57993 0 ALDGPEQMELEEGK ______________________________ MALDGPEQMELEEGKAGSGLRQYYLSKIEE M A L G K A 1 0 0 1 0 1 4 2 0 0 2 1 1 0 1 0 0 0 0 0 0 0 14 0 1544.7028 P62195 P62195 2 15 PSMC5 26S protease regulatory subunit 8 yes yes 2 3.9365E-06 168.02 By MS/MS 7 0 1 1 579510 579510 0 960 1117 990 2522 1763 1763 1 10356 0 ALDGPEQMELEEGKAGSGLR ______________________________ EQMELEEGKAGSGLRQYYLSKIEELQLIVN M A L L R Q 2 1 0 1 0 1 4 4 0 0 3 1 1 0 1 1 0 0 0 0 0 0 20 1 2086.0001 P62195 P62195 2 21 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.00010926 125.67 By MS/MS 7 0 1 1 941090 941090 0 961 1117 991 2523 1764 1764 1 16817 0 ALDIPLVK WAPRPFNLRSGRTRRALDIPLVKNWYREHC RSGRTRRALDIPLVKNWYREHCPAGQPVKV R A L V K N 1 0 0 1 0 0 0 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 8 0 867.54295 Q6P2Q9 Q6P2Q9 421 428 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.04858 91.9 By MS/MS 3 1.41 1 1 1 1 1 5 1361500 1361500 0 962 1706 992 2524;2525;2526;2527;2528 1765 1765 1 56166 0 ALDLDSSCK EAMKDYTKAMDVYQKALDLDSSCKEAADGY MDVYQKALDLDSSCKEAADGYQRCMMAQYN K A L C K E 1 0 0 2 1 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 9 0 1007.4594 P31948 P31948 454 462 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.0059526 128.38 By MS/MS 5 0 1 1 0 0 0 963 762 993 2529 1766 1766 1 0 0 ALDLDSSCKEAADGYQR EAMKDYTKAMDVYQKALDLDSSCKEAADGY DLDSSCKEAADGYQRCMMAQYNRHDSPEDV K A L Q R C 3 1 0 3 1 1 1 1 0 0 2 1 0 0 0 2 0 0 1 0 0 0 17 1 1897.8476 P31948 P31948 454 470 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.017306 69.069 By MS/MS 5.5 0.5 1 1 2 2850700 2850700 0 964 762 994 2530;2531 1767 1767 1 76190 0 ALDLENIMR CRGNVTRRERACPERALDLENIMRKFSGSC RACPERALDLENIMRKFSGSCRCCAKQIKF R A L M R K 1 1 1 1 0 0 1 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 9 0 1073.5539 Q8WVD3 Q8WVD3 72 80 RNF138 E3 ubiquitin-protein ligase RNF138 yes yes 2 0.0010788 140.35 By MS/MS 8 0 1 1 264660 264660 0 965 2029 995 2532 1768 1768 1 17460 0 ALDLLDR TKVAWAKLFPKSDSKALDLLDRMLTFNPNK LFPKSDSKALDLLDRMLTFNPNKRITVEEA K A L D R M 1 1 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 814.45487 P27361 P27361 303 309 MAPK3 Mitogen-activated protein kinase 3 yes yes 2 0.031822 113.7 By MS/MS 7 0 1 1 420150 420150 0 966 704 996 2533 1769 1769 1 7508.1 0 ALDLLMGSNTIVQSMAAK FSNSLPPAVVGCASKALDLLMGSNTIVQSM LLMGSNTIVQSMAAKTQRFRSKMEAAGFTI K A L A K T 3 0 1 1 0 1 0 1 0 1 3 1 2 0 0 2 1 0 0 1 0 0 18 0 1861.9642 O75600 O75600 309 326 GCAT 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes yes 2 7.7097E-26 220.99 By MS/MS 7 0 1 1 1482900 1482900 0 967 318 997 2534 1770;1771 1770 175;176 2 26500 0 ALDLVAAK ISDDLMQKISTQNRRALDLVAAKCYYYHAR ISTQNRRALDLVAAKCYYYHARVYEFLDKL R A L A K C 3 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 799.48035 O43242 O43242 202 209 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.045282 93.195 By MS/MS 4.5 1.12 1 1 1 1 4 4544200 4544200 0 968 187 998 2535;2536;2537;2538 1772 1772 1 46893 0 ALDPADQHLR ______________________________ ______________________________ M A L L R H 2 1 0 2 0 1 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1134.5782 Q7Z7K0 Q7Z7K0 2 11 CMC1 COX assembly mitochondrial protein homolog yes yes 2 0.0025391 101.65 By MS/MS 10 0 1 1 2317800 2317800 0 969 1810 999 2539 1773 1773 1 2463600 0 ALDQADSGCR LWRLSLRPAETARLRALDQADSGCRSLCLK TARLRALDQADSGCRSLCLKILKAICKSTP R A L C R S 2 1 0 2 1 1 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1091.4666 Q9NQG6 Q9NQG6 351 360 MIEF1 Mitochondrial dynamics protein MID51 yes yes 2 0.00092394 126.39 By MS/MS 6 0 1 1 635670 635670 0 970 2589 1000 2540 1774 1774 1 4956.9 0 ALDQFVNFSEQK QCNTELKKYSHVNKKALDQFVNFSEQKEKL NKKALDQFVNFSEQKEKLIKRQEELDRGYK K A L Q K E 1 0 1 1 0 2 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 12 0 1424.6936 Q9UQE7 Q9UQE7 986 997 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 7.4578E-17 227.36 By MS/MS 2.5 0.5 1 1 2 2591900 2591900 0 971 2860 1001 2541;2542 1775 1775 1 68881 0 ALDQFVNFSEQKEK QCNTELKKYSHVNKKALDQFVNFSEQKEKL KALDQFVNFSEQKEKLIKRQEELDRGYKSI K A L E K L 1 0 1 1 0 2 2 0 0 0 1 2 0 2 0 1 0 0 0 1 0 0 14 1 1681.8312 Q9UQE7 Q9UQE7 986 999 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 5.3575E-17 216.84 By MS/MS 3 0 1 1 1097400 1097400 0 972 2860 1002 2543 1776 1776 1 28647 0 ALDTLEDDMTISVEK GEMRNAVCIFYLVLRALDTLEDDMTISVEK ALDTLEDDMTISVEKKVPLLHNFHSFLYQP R A L E K K 1 0 0 3 0 0 2 0 0 1 2 1 1 0 0 1 2 0 0 1 0 0 15 0 1678.7971 P37268 P37268 78 92 FDFT1 Squalene synthase yes yes 2 8.4742E-06 145.81 By MS/MS 7 0 1 1 1013200 1013200 0 973 814 1003 2544 1777 1777 558 1 18105 0 ALDTMNFDVIK GYAYVNFQQPADAERALDTMNFDVIKGKPV DAERALDTMNFDVIKGKPVRIMWSQRDPSL R A L I K G 1 0 1 2 0 0 0 0 0 1 1 1 1 1 0 0 1 0 0 1 0 0 11 0 1265.6326 P11940;Q13310 P11940 68 78 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2 5.9065E-10 197.79 By MS/MS 6.67 2.36 2 1 3 210400 210400 0 974 560;1353 1004;1005 2545;2546;2547 1778;1779;1780 1778 353 3 223640 0 ALDTVLFGPPLLTR LKMTDRSHRQKLQLKALDTVLFGPPLLTRH KALDTVLFGPPLLTRHNHLKDFMLVVSIVI K A L T R H 1 1 0 1 0 0 0 1 0 0 4 0 0 1 2 0 2 0 0 1 0 0 14 0 1511.8712 Q13586 Q13586 194 207 STIM1 Stromal interaction molecule 1 yes yes 2 0.051341 69.01 By MS/MS 5.5 0.5 1 1 2 476740 476740 0 975 1384 1006 2548;2549 1781 1781 1 7891.2 0 ALDVSASDDEIAR AEKKRPKAESFFQTKALDVSASDDEIARLK TKALDVSASDDEIARLKKPDQAIKGDQFVF K A L A R L 3 1 0 3 0 0 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1360.647 P13798 P13798 181 193 APEH Acylamino-acid-releasing enzyme yes yes 2 0.00028683 143.97 By MS/MS 5 0 1 1 977000 977000 0 976 581 1007 2550 1782 1782 1 40159 0 ALDVTDKEGEEREDADVSVTQR AVQQFYQPKIQQFLRALDVTDKEGEEREDA EGEEREDADVSVTQRTAFQIRQFQRSLLNL R A L Q R T 2 2 0 4 0 1 4 1 0 0 1 1 0 0 0 1 2 0 0 3 0 0 22 2 2461.1569 Q9NVI1 Q9NVI1 933 954 FANCI Fanconi anemia group I protein yes yes 3 0.0072188 64.522 By MS/MS 3 0 1 1 1787100 1787100 0 977 2654 1008 2551 1783 1783 1 46653 0 ALDYYMLR SDDDPKKGIWLEAGKALDYYMLRNGDTMEY IWLEAGKALDYYMLRNGDTMEYRKKQRPLK K A L L R N 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 0 8 0 1043.511 Q9Y490 Q9Y490 67 74 TLN1 Talin-1 yes yes 2 0.012043 109.86 By MS/MS 2 0 1 1 352180 352180 0 978 2947 1009 2552 1784 1784 1689 1 17505 0 ALEATTEHIR KTVKAVEDEATKGTRALEATTEHIRQELAV TKGTRALEATTEHIRQELAVFCSPEPPAKT R A L I R Q 2 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1139.5935 Q9Y490 Q9Y490 2145 2154 TLN1 Talin-1 yes yes 2 6.356E-05 159.58 By MS/MS 2 0 1 1 245380 245380 0 979 2947 1010 2553 1785 1785 1 12197 0 ALEAVSSCVR PKQVADHYDNFRIYKALEAVSSCVRQTNGF FRIYKALEAVSSCVRQTNGFVQRHAPWKLN K A L V R Q 2 1 0 0 1 0 1 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1090.5441 Q96GW9 Q96GW9 472 481 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 0.00081356 131.5 By MS/MS 6 0 1 1 3418700 3418700 0 980 2186 1011 2554 1786 1786 1 26659 0 ALEDAFLAIDAK IIKDQKAYKEGKLQKALEDAFLAIDAKLTT LQKALEDAFLAIDAKLTTEEVIKELAQIAG K A L A K L 4 0 0 2 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1275.6711 O15355 O15355 93 104 PPM1G Protein phosphatase 1G yes yes 2 3.3121E-07 185.77 By MS/MS 5.5 0.5 1 1 2 2355300 2355300 0 981 170 1012 2555;2556 1787 1787 1 77147 0 ALEDFADNIK KLPGLITSMETIGAKALEDFADNIKNDPDK TIGAKALEDFADNIKNDPDKEYNMPKDGTV K A L I K N 2 0 1 2 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 10 0 1134.5557 Q9UPT5 Q9UPT5 475 484 EXOC7 Exocyst complex component 7 yes yes 2 0.00088309 128.28 By MS/MS 5 0 1 1 485230 485230 0 982 2853 1013 2557 1788 1788 1 19945 0 ALEDMFDALEGK YPGRNAREFLQCVEKALEDMFDALEGKSIK VEKALEDMFDALEGKSIKS___________ K A L G K S 2 0 0 2 0 0 2 1 0 0 2 1 1 1 0 0 0 0 0 0 0 0 12 0 1337.6173 P23786 P23786 643 654 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 2 2.0107E-06 176.48 By MS/MS 5 0 1 1 244980 244980 0 983 674 1014 2558 1789 1789 1 10070 0 ALEDVDYVQTFK DIKSLTAHVIENYWKALEDVDYVQTFKGLK YWKALEDVDYVQTFKGLKLRFEQQRERQDN K A L F K G 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 0 1 0 1 2 0 0 12 0 1426.698 Q6IN85 Q6IN85 627 638 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 2 1.0796E-23 233.84 By MS/MS 4 0 1 1 907330 907330 0 984 1685 1015 2559 1790 1790 1 24769 0 ALEEAANSGGLNLSAR GSGGFNLPLNRGLERALEEAANSGGLNLSA LEEAANSGGLNLSARKLKEFPRTAAPGHDL R A L A R K 4 1 2 0 0 0 2 2 0 0 3 0 0 0 0 2 0 0 0 0 0 0 16 0 1571.7903 Q9Y2L9 Q9Y2L9 66 81 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 yes yes 2 3.7903E-06 193.11 By MS/MS 4 0 1 1 575950 575950 0 985 2894 1016 2560 1791 1791 1 15723 0 ALEEANADLEVK QNLNDRLASYLDKVRALEEANADLEVKIRD KVRALEEANADLEVKIRDWYQRQRPAEIKD R A L V K I 3 0 1 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1300.6511 CON__P02533;P02533;CON__Q6IFX2;CON__P19012;P19012;CON__P08779;P08779 CON__P02533 135 146 KRT14;KRT15;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 16 no no 2 3.7129E-11 234.9 By MS/MS By MS/MS 5.43 2.72 1 1 2 2 2 1 1 1 2 1 5 9 18899000 9317900 9581100 + 986 35;47 1017 2561;2562;2563;2564;2565;2566;2567;2568;2569;2570;2571;2572;2573;2574 1792;1793;1794;1795;1796;1797;1798;1799;1800;1801;1802;1803;1804;1805;1806 1795 15 2116900 24184000 ALEEELAGLK KDVQDELRIKENELRALEEELAGLKNTAEK ENELRALEEELAGLKNTAEKYRQLKQQWEM R A L L K N 2 0 0 0 0 0 3 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1071.5812 O95347 O95347 697 706 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00067206 138.06 By MS/MS 3 0 1 1 967740 967740 0 987 385 1018 2575 1807 1807 1 25263 0 ALEEELAGLKNTAEK KDVQDELRIKENELRALEEELAGLKNTAEK ALEEELAGLKNTAEKYRQLKQQWEMKTEEA R A L E K Y 3 0 1 0 0 0 4 1 0 0 3 2 0 0 0 0 1 0 0 0 0 0 15 1 1614.8465 O95347 O95347 697 711 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.049321 106.67 By MS/MS 3 0 1 1 1364600 1364600 0 988 385 1019 2576 1808 1808 1 35622 0 ALEENNNFSK QLAEKREHEREVLQKALEENNNFSKMAEEK EVLQKALEENNNFSKMAEEKLILKMEQIKE K A L S K M 1 0 3 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1164.5411 Q93045 Q93045 120 129 STMN2 Stathmin-2 yes yes 2 3.3091E-07 191.4 By MS/MS 9.5 0.5 1 1 2 681140 681140 0 989 2098 1020 2577;2578 1809 1809 1 494110 0 ALEENNNFSR QLAERREHEREVLHKALEENNNFSRQAEEK EVLHKALEENNNFSRQAEEKLNYKMELSKE K A L S R Q 1 1 3 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1192.5473 Q9NZ72 Q9NZ72 121 130 STMN3 Stathmin-3 yes yes 2 0.021008 91.658 By MS/MS 9 0 1 1 326170 326170 0 990 2708 1021 2579 1810 1810 1 187190 0 ALEESNYELEGK QNLNDRLASYLDKVRALEESNYELEGKIKE KVRALEESNYELEGKIKEWYEKHGNSHQGE R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1380.6409 CON__P13645;P13645;CON__P02535-1 CON__P13645 166 177 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.8128E-33 267.39 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 226440000 140590000 85849000 + 991 49 1022 2580;2581;2582;2583;2584;2585;2586;2587;2588;2589;2590;2591;2592;2593;2594;2595;2596;2597;2598;2599 1811;1812;1813;1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831;1832 1812 22 18903000 273480000 ALEFAPACHR FEKRDFRKVVFCMDRALEFAPACHRFKILK FCMDRALEFAPACHRFKILKAECLAMLGRY R A L H R F 3 1 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1170.5604 Q99615 Q99615 168 177 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.029527 85.731 By MS/MS 6 0 1 1 5467600 5467600 0 992 2276 1023 2600 1833 1833 1 42637 0 ALEFGEPVLLVGDTGCGK VWTEGMRRLAMLVGRALEFGEPVLLVGDTG FGEPVLLVGDTGCGKTTICQVFAALANQKL R A L G K T 1 0 0 1 1 0 2 4 0 0 3 1 0 1 1 0 1 0 0 2 0 0 18 0 1860.9291 Q9NU22 Q9NU22 1379 1396 MDN1 Midasin yes yes 2 0.00011146 132.31 By MS/MS 2 0.816 1 1 1 3 559490 559490 0 993 2635 1024 2601;2602;2603 1834;1835;1836;1837 1837 4 21620 0 ALEGLVYR LTTSEDIERWEAALRALEGLVYRSPTATRE RWEAALRALEGLVYRSPTATREVSVELAKV R A L Y R S 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 1 1 0 0 8 0 919.51272 Q9Y4R8 Q9Y4R8 537 544 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0090135 122.13 By MS/MS 4 0 1 1 2192100 2192100 0 994 2958 1025 2604 1838 1838 1 59841 0 ALELDGQSVK LKMQQHEQALADCRRALELDGQSVKAHFFL ADCRRALELDGQSVKAHFFLGQCQLEMESY R A L V K A 1 0 0 1 0 1 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1058.5608 Q9UNE7 Q9UNE7 86 95 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 6.4519E-05 169.65 By MS/MS 8 0 1 1 3065200 3065200 0 995 2838 1026 2605 1839 1839 1 202210 0 ALELDHK LSLGNAMAACRSFQRALELDHKNAQAQQEF AACRSFQRALELDHKNAQAQQEFKNANAVM R A L H K N 1 0 0 1 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 824.43922 Q99615 Q99615 122 128 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.02603 117.7 By MS/MS 6 0 1 1 10796000 10796000 0 996 2276 1027 2606 1840 1840 1 84184 0 ALELDHKNAQAQQEFK LSLGNAMAACRSFQRALELDHKNAQAQQEF LELDHKNAQAQQEFKNANAVMEYEKIAETD R A L F K N 3 0 1 1 0 3 2 0 1 0 2 2 0 1 0 0 0 0 0 0 0 0 16 1 1868.9381 Q99615 Q99615 122 137 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 0.0077383 81.713 By MS/MS 6 0 1 1 5141800 5141800 0 997 2276 1028 2607 1841 1841 1 40096 0 ALELDPNLYR KGFMDGKQACERMIRALELDPNLYRIGQSK ERMIRALELDPNLYRIGQSKIFFRAGVLAH R A L Y R I 1 1 1 1 0 0 1 0 0 0 3 0 0 0 1 0 0 0 1 0 0 0 10 0 1202.6295 P35580 P35580 753 762 MYH10 Myosin-10 no no 2 0.0050913 107.15 By MS/MS 2.5 0.5 1 1 2 426040 426040 0 998 794 1029 2608;2609 1842 1842 1 18338 0 ALELDSNLYR KGFMDGKQACVLMIKALELDSNLYRIGQSK VLMIKALELDSNLYRIGQSKVFFRAGVLAH K A L Y R I 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 10 0 1192.6088 P35579 P35579 746 755 MYH9 Myosin-9 yes yes 2 0.0062576 116.3 By MS/MS By matching 2 0 2 1 1 789880 765800 24080 999 793 1030 2610;2611 1843 1843 1 38064 20273 ALELDSNNEK LKLQAFSAAIESCNKALELDSNNEKGLFRR ESCNKALELDSNNEKGLFRRGEAHLAVNDF K A L E K G 1 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5408 Q02790 Q02790 345 354 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 2.4879E-07 198.61 By MS/MS By matching 6 0 2 1 1 7784000 7767300 16637 1000 1255 1031 2612;2613 1844 1844 1 60570 51026 ALENSNYGVR MWTAELENIATLCFKALENSNYGVRVAVSK TLCFKALENSNYGVRVAVSKLLGTVMATAL K A L V R V 1 1 2 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 10 0 1121.5465 Q9P2D3 Q9P2D3 226 235 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.00014256 160.82 By MS/MS 2 0 1 1 235390 235390 0 1001 2736 1032 2614 1845 1845 1 11700 0 ALENVLSGKA TNVPLNNFSADQVTRALENVLSGKA_____ DQVTRALENVLSGKA_______________ R A L K A - 2 0 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 1 1000.5553 O43678 O43678 90 99 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 2 0.00017443 171.85 By MS/MS 10 0 1 1 2307400 2307400 0 1002 213 1033 2615 1846 1846 1 2452600 0 ALEPSAVQEEFMTSR SDIPRTPVLGCCISRALEPSAVQEEFMTSR ALEPSAVQEEFMTSRVNWVVQSSAVDYLHL R A L S R V 2 1 0 0 0 1 3 0 0 0 1 0 1 1 1 2 1 0 0 1 0 0 15 0 1693.7981 P54098 P54098 1082 1096 POLG DNA polymerase subunit gamma-1 yes yes 2 3.2551E-12 159.58 By MS/MS 3 0 1 1 0 0 0 1003 1011 1034 2616 1847 1847 1 0 0 ALEQKPDDAQYYCQR LIDEDPQAALEELTKALEQKPDDAQYYCQR ALEQKPDDAQYYCQRAYCHILLGNYCVAVA K A L Q R A 2 1 0 2 1 3 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 15 1 1883.8472 Q9Y2Z0 Q9Y2Z0 37 51 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 3 0.0013696 111.66 By MS/MS 7 0 1 1 2430200 2430200 0 1004 2907 1035 2617 1848 1848 1 43428 0 ALEQLLENNTTR TRTYNPPTDFSGLRRALEQLLENNTTRSPR LRRALEQLLENNTTRSPRHPGVIFKALKAL R A L T R S 1 1 2 0 0 1 2 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 12 0 1400.726 Q9HBF4 Q9HBF4 377 388 ZFYVE1 Zinc finger FYVE domain-containing protein 1 yes yes 2 1.2031E-16 223.77 By MS/MS 5 0 1 1 1370700 1370700 0 1005 2550 1036 2618 1849 1849 1 56342 0 ALEQQVEEMK DDVGKSVHELEKSKRALEQQVEEMKTQLEE EKSKRALEQQVEEMKTQLEELEDELQATED R A L M K T 1 0 0 0 0 2 3 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 10 0 1203.5805 P35579 P35579 1529 1538 MYH9 Myosin-9 yes yes 2 0.021516 94.409 By MS/MS 2 0 1 1 0 0 0 1006 793 1037 2619 1850 1850 1 0 0 ALESDMAPVLIMATNR EVHMLDIESFSFLNRALESDMAPVLIMATN LESDMAPVLIMATNRGITRIRGTSYQSPHG R A L N R G 3 1 1 1 0 0 1 0 0 1 2 0 2 0 1 1 1 0 0 1 0 0 16 0 1730.8695 Q9Y230 Q9Y230 315 330 RUVBL2 RuvB-like 2 yes yes 2;3 3.255E-08 210.41 By MS/MS By MS/MS 6 0 3 2 1 11626000 11555000 71238 1007 2864 1038;1039 2620;2621;2622 1851;1852;1853;1854;1855 1854 1652;1653 5 90107 218480 ALESELQQLR AQLRGALQQGEAFQRALESELQQLRARLQG EAFQRALESELQQLRARLQGLEADCVRGPD R A L L R A 1 1 0 0 0 2 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1185.6354 Q96AQ6 Q96AQ6 326 335 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes yes 2 0.00031879 152.06 By MS/MS 4 0 1 1 548610 548610 0 1008 2122 1040 2623 1856 1856 1 14977 0 ALESSIAPIVIFASNR EVHMLDIECFTYLHRALESSIAPIVIFASN LESSIAPIVIFASNRGNCVIRGTEDITSPH R A L N R G 3 1 1 0 0 0 1 0 0 3 1 0 0 1 1 3 0 0 0 1 0 0 16 0 1686.9305 Q9Y265 Q9Y265 318 333 RUVBL1 RuvB-like 1 yes yes 2;3 2.5998E-08 212.68 By MS/MS 6 0 3 3 43761000 43761000 0 1009 2870 1041 2624;2625;2626 1857;1858;1859 1858 3 341250 0 ALESVTNENAIIPLPTIK QSSVRISEKFPSSPKALESVTNENAIIPLP SVTNENAIIPLPTIKWKPLIHSPSRTPVLV K A L I K W 2 0 2 0 0 0 2 0 0 3 2 1 0 0 2 1 2 0 0 1 0 0 18 0 1922.0724 Q9NZJ5 Q9NZJ5 413 430 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes yes 2 0.0057854 95.183 By MS/MS 3.5 0.5 1 1 2 188680 188680 0 1010 2712 1042 2627;2628 1860 1860 1 4975 0 ALETVPKDLR ______________________________ ______________________________ M A L L R H 1 1 0 1 0 0 1 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 10 1 1140.6503 P63272 P63272 2 11 SUPT4H1 Transcription elongation factor SPT4 yes yes 2 0.0019766 109.66 By MS/MS 10 0 1 1 0 0 0 1011 1180 1043 2629 1861 1861 1 0 0 ALEVAEYLTPVLK ______________________________ GKALEVAEYLTPVLKESKFKETGVITPEEF K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 Q9NT62 Q9NT62 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 2 0.00077067 134.2 By MS/MS 7.5 0.5 1 1 2 421080 421080 0 1012 2629 1044 2630;2631 1862;1863 1862 2 14478 0 ALEVIKPAHILQEK QIRNQLTAMSSVLAKALEVIKPAHILQEKE KALEVIKPAHILQEKEEQHQLAVTAYLKNS K A L E K E 2 0 0 0 0 1 2 0 1 2 2 2 0 0 1 0 0 0 0 1 0 0 14 1 1587.9348 Q14152 Q14152 533 546 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0089668 81.904 By MS/MS 3.5 0.5 1 1 2 3071700 3071700 0 1013 1409 1045 2632;2633 1864 1864 1 80475 0 ALEVYDLIR SEPGAARQPRIMEEKALEVYDLIRTIRDPE RIMEEKALEVYDLIRTIRDPEKPNTLEELE K A L I R T 1 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1090.6023 Q9H5X1 Q9H5X1 37 45 FAM96A MIP18 family protein FAM96A yes yes 2 0.0026774 122.52 By MS/MS 9.5 0.5 1 1 2 229130 229130 0 1014 2507 1046 2634;2635 1865 1865 1 220440 0 ALEYLKQEVEER DSSKELEELRAAFTRALEYLKQEVEERFNE FTRALEYLKQEVEERFNESGDPSCVIMQNW R A L E R F 1 1 0 0 0 1 4 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 12 1 1505.7726 Q15020 Q15020 452 463 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 2;3 0.0004754 132.5 By MS/MS 3.33 0.471 2 1 3 2276400 2276400 0 1015 1463 1047 2636;2637;2638 1866;1867 1867 1 59671 0 ALEYTIYNQELNETR KEELAQYQKWDKMRRALEYTIYNQELNETR ALEYTIYNQELNETRAKLDELSAKRETSGE R A L T R A 1 1 2 0 0 1 3 0 0 1 2 0 0 0 0 0 2 0 2 0 0 0 15 0 1855.8952 Q9UQE7 Q9UQE7 222 236 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.1516E-127 378.52 By MS/MS 3 0 1 1 2710700 2710700 0 1016 2860 1048 2639 1868 1868 1 70764 0 ALFAGDIEEMEER FGDFPTMPKLIPPLKALFAGDIEEMEERRE LKALFAGDIEEMEERREKRELRQVRAALLS K A L E R R 2 1 0 1 0 0 4 1 0 1 1 0 1 1 0 0 0 0 0 0 0 0 13 0 1508.6817 Q9BQ52 Q9BQ52 769 781 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 1.8082E-12 212.28 By MS/MS 4 0 1 1 546590 546590 0 1017 2305 1049 2640 1869 1869 1 14921 0 ALFNAQFGSIFR AAWMKERQELRCITKALFNAQFGSIFRTFH ITKALFNAQFGSIFRTFHNPTYFSRRLVRF K A L F R T 2 1 1 0 0 1 0 1 0 1 1 0 0 3 0 1 0 0 0 0 0 0 12 0 1369.7143 Q9H857 Q9H857 439 450 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 3.3643E-05 169.58 By MS/MS 6 0 1 1 1269000 1269000 0 1018 2522 1050 2641 1870;1871 1870 2 9895.6 0 ALFPAFAGLSEAPDGGSSR ______________________________ AFAGLSEAPDGGSSRKELDWLSNPSFCVGS M A L S R K 4 1 0 1 0 0 1 3 0 0 2 0 0 2 2 3 0 0 0 0 0 0 19 0 1848.9006 Q9H7Z3 Q9H7Z3 2 20 NRDE2 Protein NRDE2 homolog yes yes 2 0.0057318 73.219 By MS/MS 3 0 1 1 99305 99305 0 1019 2518 1051 2642 1872;1873 1873 2 2592.4 0 ALFPGDSEIDQLFR IWSLGCIFAEMVTRRALFPGDSEIDQLFRI RALFPGDSEIDQLFRIFRTLGTPDEVVWPG R A L F R I 1 1 0 2 0 1 1 1 0 1 2 0 0 2 1 1 0 0 0 0 0 0 14 0 1606.7991 P24941;Q00526 P24941 201 214 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2 0.0042131 107.34 By MS/MS 8 0 1 1 195610 195610 0 1020 682 1052 2643 1874 1874 1 12904 0 ALFQLSR ADVKEEFVEDAAALKALFQLSRLEERSVLF VEDAAALKALFQLSRLEERSVLFAVASALV K A L S R L 1 1 0 0 0 1 0 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 7 0 833.47594 Q9H3U1 Q9H3U1 573 579 UNC45A Protein unc-45 homolog A yes yes 2 0.0023308 189.62 By MS/MS 4.5 0.5 1 1 2 1558100 1558100 0 1021 2493 1053 2644;2645 1875 1875 1 48853 0 ALFSLAPEVEVR CFIGRSNVGKSSLIKALFSLAPEVEVRVSK LIKALFSLAPEVEVRVSKKPGHTKKMNFFK K A L V R V 2 1 0 0 0 0 2 0 0 0 2 0 0 1 1 1 0 0 0 2 0 0 12 0 1329.7293 Q8N3Z3 Q8N3Z3 129 140 GTPBP8 GTP-binding protein 8 yes yes 2 0.00032289 148.56 By MS/MS 8 0 1 1 0 0 0 1022 1912 1054 2646 1876 1876 1 0 0 ALGDLISATK ETQVVLINAVKDVAKALGDLISATKAAAGK KDVAKALGDLISATKAAAGKVGDDPAVWQL K A L T K A 2 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 0 987.56006 Q9Y490 Q9Y490 2090 2099 TLN1 Talin-1 yes yes 2 0.0008928 135.43 By MS/MS 2 0.816 1 1 1 3 1427000 1427000 0 1023 2947 1055 2647;2648;2649 1877 1877 1 63645 0 ALGGEDVR AEKQYGFCKGSVIQKALGGEDVRVTCTLFQ KGSVIQKALGGEDVRVTCTLFQTQPVIPQP K A L V R V 1 1 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 815.41373 CON__P12763 CON__P12763 238 245 yes yes 2 0.045282 93.195 By MS/MS 5 0 1 1 528170 528170 0 + 1024 48 1056 2650 1878 1878 1 21710 0 ALGGLLGR NPYGPAGTGKTESVKALGGLLGRQVLVFNC GKTESVKALGGLLGRQVLVFNCDEGIDVKS K A L G R Q 1 1 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 755.46537 Q8NCM8 Q8NCM8 1701 1708 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.053665 89.903 By MS/MS 1 0 1 1 111630 111630 0 1025 1954 1057 2651 1879 1879 1 5453.9 0 ALGHQLGR SPFGPAGTGKTESVKALGHQLGRFVLVFNC GKTESVKALGHQLGRFVLVFNCDETFDFQA K A L G R F 1 1 0 0 0 1 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 850.47733 Q14204 Q14204 1918 1925 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0084118 124.37 By MS/MS 2 0.816 1 1 1 3 1609200 1609200 0 1026 1421 1058 2652;2653;2654 1880;1881 1880 2 61156 0 ALGIHQTGQK PSNPKDKSTSIRYLKALGIHQTGQKVTDDM IRYLKALGIHQTGQKVTDDMYAEQTENPEN K A L Q K V 1 0 0 0 0 2 0 2 1 1 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1051.5774 Q2TAL8 Q2TAL8 673 682 QRICH1 Glutamine-rich protein 1 yes yes 2 0.0027233 114.89 By MS/MS 4 0 1 1 536720 536720 0 1027 1562 1059 2655 1882 1882 1 14652 0 ALGLQFHSR EATYSQLAHPIQQAKALGLQFHSRILDIDN PIQQAKALGLQFHSRILDIDNVDLAMGKMM K A L S R I 1 1 0 0 0 1 0 1 1 0 2 0 0 1 0 1 0 0 0 0 0 0 9 0 1027.5563 O43615 O43615 360 368 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0017265 132.76 By MS/MS 7 0 1 1 1660800 1660800 0 1028 209 1060 2656 1883 1883 1 29679 0 ALGQNPTNAEVLK GDGKILYSQCGDVMRALGQNPTNAEVLKVL MRALGQNPTNAEVLKVLGNPKSDEMNVKVL R A L L K V 2 0 2 0 0 1 1 1 0 0 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1353.7252 P60660;P14649 P60660 38 50 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 2 1.05E-11 202.03 By MS/MS By matching 10 0 2 1 1 4532400 4370300 162070 1029 1071 1061 2657;2658 1884 1884 1 4645100 4157000 ALGSEVQDASK EEMEVRSVVADTDQKALGSEVQDASKVTTQ TDQKALGSEVQDASKVTTQIDKEKKEIPVS K A L S K V 2 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1103.5459 Q9H2G2 Q9H2G2 664 674 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.012432 96.171 By MS/MS 2.5 0.5 1 1 2 1174100 1174100 0 1030 2476 1062 2659;2660 1885;1886 1885 2 58358 0 ALGTEVIQLFPEK FLGSELACALGRKARALGTEVIQLFPEKGN ARALGTEVIQLFPEKGNMGKILPEYLSNWT R A L E K G 1 0 0 0 0 1 2 1 0 1 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1443.7973 O95831 O95831 325 337 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 3.0857E-05 190.26 By MS/MS 6 1.41 1 1 1 1 1 5 16385000 16385000 0 1031 409 1063 2661;2662;2663;2664;2665 1887;1888;1889;1890;1891 1890 5 554190 0 ALGTEVIQLFPEKGNMGK FLGSELACALGRKARALGTEVIQLFPEKGN TEVIQLFPEKGNMGKILPEYLSNWTMEKVR R A L G K I 1 0 1 0 0 1 2 3 0 1 2 2 1 1 1 0 1 0 0 1 0 0 18 1 1931.0186 O95831 O95831 325 342 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 1.151E-11 178.22 By MS/MS 5.75 0.829 2 1 1 4 6626000 6626000 0 1032 409 1064 2666;2667;2668;2669 1892;1893;1894 1893 215 3 210170 0 ALGVAVGGGVDGSR LLFRASVKTVKTRNKALGVAVGGGVDGSRD KALGVAVGGGVDGSRDELFRRSPRPKGDFS K A L S R D 2 1 0 1 0 0 0 5 0 0 1 0 0 0 0 1 0 0 0 3 0 0 14 0 1213.6415 Q9P2W9 Q9P2W9 22 35 STX18 Syntaxin-18 yes yes 2 0.00069571 115.91 By MS/MS 7 0 1 1 0 0 0 1033 2742 1065 2670 1895 1895 1 0 0 ALGVTEDRLR NVKELQAACRARGMRALGVTEDRLRGQLKQ ARGMRALGVTEDRLRGQLKQWLDLHLHQEI R A L L R G 1 2 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 10 1 1128.6251 O95202 O95202 386 395 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 3 0.03993 70.256 By MS/MS 5 0 1 1 1012400 1012400 0 1034 374 1066 2671 1896 1896 1 41612 0 ALHDQSQELQDAAGHR LILGLRRCCLWTELKALHDQSQELQDAAGH LHDQSQELQDAAGHRQLLLRELQAKQQRIL K A L H R Q 3 1 0 2 0 3 1 1 2 0 2 0 0 0 0 1 0 0 0 0 0 0 16 0 1774.8347 O94927 O94927 357 372 HAUS5 HAUS augmin-like complex subunit 5 yes yes 3 0.016948 64.476 By MS/MS 5 0 1 1 573400 573400 0 1035 360 1067 2672 1897 1897 1 23569 0 ALHHGIDLEK SGAQRIHDPQLLTERALHHGIDLEKIKAYI LLTERALHHGIDLEKIKAYIDSFRFGAPPH R A L E K I 1 0 0 1 0 0 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1131.6037 P14868 P14868 442 451 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.015137 86.882 By MS/MS 3.5 2.5 1 1 2 2169300 2169300 0 1036 594 1068 2673;2674 1898;1899 1899 2 26207 0 ALHVNNDR ISSYTAFSRLILILRALHVNNDRAKVILKP RLILILRALHVNNDRAKVILKPDKTTITEP R A L D R A 1 1 2 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 937.47298 Q6P2Q9 Q6P2Q9 1942 1949 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 0.0067531 133.12 By MS/MS 1.5 0.5 1 1 2 741500 741500 0 1037 1706 1069 2675;2676 1900 1900 1 36836 0 ALHVPKAPGFAQMLK ______________________________ ALHVPKAPGFAQMLKEGAKHFSGLEEAVYR M A L L K E 3 0 0 0 0 1 0 1 1 0 2 2 1 1 2 0 0 0 0 1 0 0 15 1 1606.9018 P50990 P50990 2 16 CCT8 T-complex protein 1 subunit theta yes yes 3 0.0058505 95.417 By MS/MS 6 0 1 1 3821100 3821100 0 1038 955 1070 2677 1901 1901 702 1 29797 0 ALIAAQYSGAQVR AGTLYTYPENWRAFKALIAAQYSGAQVRVL FKALIAAQYSGAQVRVLSAPPHFHFGQTNR K A L V R V 4 1 0 0 0 2 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 13 0 1346.7306 P26641 P26641 18 30 EEF1G Elongation factor 1-gamma yes yes 2 1.4873E-11 196.88 By MS/MS By MS/MS 5.6 2.87 1 1 1 1 2 1 1 1 1 9 1 183050000 182890000 156180 1039 700 1071 2678;2679;2680;2681;2682;2683;2684;2685;2686;2687 1902;1903;1904;1905;1906 1905 5 3225300 479000 ALIAGGGAPEIELALR IHDALCVIRCLVKKRALIAGGGAPEIELAL LIAGGGAPEIELALRLTEYSRTLSGMESYC R A L L R L 4 1 0 0 0 0 2 3 0 2 3 0 0 0 1 0 0 0 0 0 0 0 16 0 1549.8828 P50991 P50991 420 435 CCT4 T-complex protein 1 subunit delta yes yes 2;3 2.3508E-10 187.58 By MS/MS 5.6 2.87 1 1 1 1 2 1 1 1 1 10 380550000 380550000 0 1040 956 1072 2688;2689;2690;2691;2692;2693;2694;2695;2696;2697 1907;1908;1909;1910;1911;1912;1913;1914;1915;1916;1917;1918 1914 12 4285000 0 ALIASAGADALAK KHEEAIHAVACHPSKALIASAGADALAKVF SKALIASAGADALAKVFV____________ K A L A K V 6 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 13 0 1170.6608 Q9NRL3 Q9NRL3 738 750 STRN4 Striatin-4 yes yes 2 0.000165 151.22 By MS/MS 4.5 0.5 1 1 2 1349200 1349200 0 1041 2607 1073 2698;2699 1919 1919 1 40388 0 ALIDQEVK QEDESGIKQAAENIKALIDQEVKNGIPSNR QAAENIKALIDQEVKNGIPSNRIILGGFSQ K A L V K N 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 914.5073 O75608 O75608 98 105 LYPLA1 Acyl-protein thioesterase 1 yes yes 2 0.021982 102.51 By MS/MS 9 0 1 1 1268900 1268900 0 1042 320 1074 2700 1920 1920 1 728250 0 ALIDTLLDGYETAR LDLRNTSTPFKGVRKALIDTLLDGYETARY KALIDTLLDGYETARYGTGVFGQNEYLRYQ K A L A R Y 2 1 0 2 0 0 1 1 0 1 3 0 0 0 0 0 2 0 1 0 0 0 14 0 1549.7988 Q9BWL3 Q9BWL3 152 165 C1orf43 Uncharacterized protein C1orf43 yes yes 2 8.8929E-05 149.49 By MS/MS 8 0 1 1 124030 124030 0 1043 2396 1075 2701 1921 1921 1 8182.2 0 ALIGATNPADAPPGTIR VAMVWQGLDVVRTSRALIGATNPADAPPGT IGATNPADAPPGTIRGDFCIEVGKNLIHGS R A L I R G 4 1 1 1 0 0 0 2 0 2 1 0 0 0 3 0 2 0 0 0 0 0 17 0 1633.8788 Q13232 Q13232 106 122 NME3 Nucleoside diphosphate kinase 3 yes yes 2 5.2344E-34 249.75 By MS/MS 10 0 1 1 470560 470560 0 1044 1349 1076 2702 1922 1922 1 500150 0 ALIGNILATGLP FKIEEKEIEHALKDKALIGNILATGLP___ KDKALIGNILATGLP_______________ K A L L P - 2 0 1 0 0 0 0 2 0 2 3 0 0 0 1 0 1 0 0 0 0 0 12 0 1151.6914 Q99741 Q99741 549 560 CDC6 Cell division control protein 6 homolog yes yes 2 0.019286 86.67 By MS/MS 6 0 1 1 227230 227230 0 1045 2289 1077 2703 1923 1923 1 1771.9 0 ALIGQEGDPDLK GKKLIIVASQAMRYRALIGQEGDPDLKLPD RYRALIGQEGDPDLKLPDFSYCILERLGRS R A L L K L 1 0 0 2 0 1 1 2 0 1 2 1 0 0 1 0 0 0 0 0 0 0 12 0 1254.6456 Q12789 Q12789 161 172 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0049511 106.4 By MS/MS 2 0.816 1 1 1 3 571780 571780 0 1046 1306 1078 2704;2705;2706 1924 1924 1 22594 0 ALIPLALEGTDVGQTK EVEDRGTVVAQGGGRALIPLALEGTDVGQT LIPLALEGTDVGQTKAAQALAKLTITSNPE R A L T K A 2 0 0 1 0 1 1 2 0 1 3 1 0 0 1 0 2 0 0 1 0 0 16 0 1624.9036 Q9H3U1 Q9H3U1 692 707 UNC45A Protein unc-45 homolog A yes yes 2;3 1.4506E-14 221.09 By MS/MS 5.25 1.56 1 2 2 1 1 1 8 10183000 10183000 0 1047 2493 1079 2707;2708;2709;2710;2711;2712;2713;2714 1925;1926;1927;1928;1929;1930 1925 6 266560 0 ALISPFDVIK FQVAVAGSVSGLVTRALISPFDVIKIRFQL GLVTRALISPFDVIKIRFQLQHERLSRSDP R A L I K I 1 0 0 1 0 0 0 0 0 2 1 1 0 1 1 1 0 0 0 1 0 0 10 0 1101.6434 Q9HC21 Q9HC21 31 40 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0040959 110.41 By MS/MS 8 0 1 1 3426200 3426200 0 1048 2556 1080 2715 1931 1931 1 226030 0 ALIVVQQGMTPSAK IKVYCQRMQEENITRALIVVQQGMTPSAKQ RALIVVQQGMTPSAKQSLVDMAPKYILEQF R A L A K Q 2 0 0 0 0 2 0 1 0 1 1 1 1 0 1 1 1 0 0 2 0 0 14 0 1441.7963 P19388 P19388 102 115 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 7.6029E-13 211.37 By MS/MS 8.5 0.5 1 1 2 3005300 3005300 0 1049 632 1081 2716;2717 1932 1932 427 1 237430 0 ALKDAAEHR RKVHEARAGVLAERKALKDAAEHRELMAWN VLAERKALKDAAEHRELMAWNQAENRRLHE K A L H R E 3 1 0 1 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1009.5305 Q9BYN8 Q9BYN8 95 103 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 3 0.0052225 107.45 By MS/MS 8.5 0.5 1 1 2 484160 484160 0 1050 2417 1082 2718;2719 1933 1933 1 265480 0 ALKDEIDVLR QHRNDELTSLAEETRALKDEIDVLRATSDK AEETRALKDEIDVLRATSDKANKLESTVEI R A L L R A 1 1 0 2 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 10 1 1170.6608 Q9UJC3 Q9UJC3 301 310 HOOK1 Protein Hook homolog 1 yes yes 2 0.0072833 123.51 By MS/MS 4.5 0.5 1 1 2 1692200 1692200 0 1051 2794 1083 2720;2721 1934 1934 1 49055 0 ALKDKIEK VEKEFEPLLNWMKDKALKDKIEKAVVSQRL LNWMKDKALKDKIEKAVVSQRLTESPCALV K A L E K A 1 0 0 1 0 0 1 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 8 2 943.57023 P14625 P14625 626 633 HSP90B1 Endoplasmin yes yes 3 0.0071175 134.48 By MS/MS 4 0 1 1 3958900 3958900 0 1052 589 1084 2722 1935 1935 1 108070 0 ALKDPNQLIR EQQDLALLSISTFQRALKDPNQLIRASALR STFQRALKDPNQLIRASALRVLSSIRVPII R A L I R A 1 1 1 1 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 10 1 1166.6772 O00203 O00203 123 132 AP3B1 AP-3 complex subunit beta-1 yes yes 3 0.0017778 111.06 By MS/MS 4 0 1 1 389190 389190 0 1053 77 1085 2723 1936 1936 1 10624 0 ALKDYALEK ______________________________ ______________________________ M A L E K E 2 0 0 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 9 1 1049.5757 P33993 P33993 2 10 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.011502 117.7 By MS/MS 4.5 0.5 1 1 2 10940000 10940000 0 1054 775 1086 2724;2725 1937 1937 1 446900 0 ALKDYALEKEK ______________________________ ______________________________ M A L E K V 2 0 0 1 0 0 2 0 0 0 2 3 0 0 0 0 0 0 1 0 0 0 11 2 1306.7133 P33993 P33993 2 12 MCM7 DNA replication licensing factor MCM7 yes yes 2;3 0.00027012 137.4 By MS/MS 5.86 1.25 1 2 2 1 1 7 28490000 28490000 0 1055 775 1087 2726;2727;2728;2729;2730;2731;2732 1938;1939;1940 1939 3 951800 0 ALKLNSNEAR ELQAYPALVVEKMLKALKLNSNEARLKFPR EKMLKALKLNSNEARLKFPRLLQIIERYPE K A L A R L 2 1 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 1 1114.6095 P78527 P78527 3453 3462 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.038229 106.88 By MS/MS 2 0.816 1 1 1 3 872570 872570 0 1056 1197 1088 2733;2734;2735 1941 1941 1 37755 0 ALLAEGVILR LGETDEEKLFVETGKALLAEGVILRRVGEA VETGKALLAEGVILRRVGEARTQHGGSHVS K A L L R R 2 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 10 0 1053.6546 Q9Y3D9 Q9Y3D9 124 133 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00045295 146.81 By MS/MS 9.5 0.5 1 1 2 8993800 8993800 0 1057 2935 1089 2736;2737 1942;1943 1942 2 5161600 0 ALLAEGVILRR LGETDEEKLFVETGKALLAEGVILRRVGEA ETGKALLAEGVILRRVGEARTQHGGSHVSR K A L R R V 2 2 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 11 1 1209.7557 Q9Y3D9 Q9Y3D9 124 134 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.0061562 135.83 By MS/MS 9 0 1 1 2961300 2961300 0 1058 2935 1090 2738 1944 1944 1 1699500 0 ALLAMYTNQAEQCR FKLSKKQLQAIEFNKALLAMYTNQAEQCRK KALLAMYTNQAEQCRKISASLQSQSPEHLL K A L C R K 3 1 1 0 1 2 1 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 14 0 1667.776 O76094 O76094 311 324 SRP72 Signal recognition particle subunit SRP72 yes yes 2 1.0581E-07 176.78 By MS/MS 5 0 2 2 1890800 1890800 0 1059 346 1091;1092 2739;2740 1945;1946 1946 189 2 77720 0 ALLANALTSALR LPLLGLHEAASFYQRALLANALTSALRLHQ YQRALLANALTSALRLHQRLPHFQLSRAFL R A L L R L 4 1 1 0 0 0 0 0 0 0 4 0 0 0 0 1 1 0 0 0 0 0 12 0 1212.719 P57088 P57088 58 69 TMEM33 Transmembrane protein 33 yes yes 2 1.4927E-16 221.5 By MS/MS 9.5 0.5 1 1 2 2608200 2608200 0 1060 1053 1093 2741;2742 1947 1947 1 1510100 0 ALLANQDSGEVQQDPK RSLEEEKAAVTEAVRALLANQDSGEVQQDP LLANQDSGEVQQDPKYQGLRARGREIRKEL R A L P K Y 2 0 1 2 0 3 1 1 0 0 2 1 0 0 1 1 0 0 0 1 0 0 16 0 1711.8377 Q9NP81 Q9NP81 119 134 SARS2 Serine--tRNA ligase, mitochondrial yes yes 2 2.9346E-15 243.37 By MS/MS 6.5 0.5 1 1 2 2675700 2675700 0 1061 2576 1094 2743;2744 1948 1948 1 24748 0 ALLAPLVAPEAGEAEPGSQER KAVIQGLETLRGEHRALLAPLVAPEAGEAE VAPEAGEAEPGSQERCILLRRSLEAIELGL R A L E R C 5 1 0 0 0 1 4 2 0 0 3 0 0 0 3 1 0 0 0 1 0 0 21 0 2104.08 Q9H0B6 Q9H0B6 37 57 KLC2 Kinesin light chain 2 yes yes 2;3 0.0004553 104.41 By MS/MS 5 0 2 2 2886400 2886400 0 1062 2451 1095 2745;2746 1949;1950 1949 2 118640 0 ALLDASETTSTR NRKVEQLQQEYTEMKALLDASETTSTRKIK EMKALLDASETTSTRKIKEEEKRVNSKFDT K A L T R K 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 3 0 0 0 0 0 12 0 1263.6307 Q14258 Q14258 250 261 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0002131 152.04 By MS/MS 1 0 1 1 234320 234320 0 1063 1427 1096 2747 1951 1951 1 11448 0 ALLEAGALPNAPNSYGR WLATAAARGRVEEVRALLEAGALPNAPNSY LEAGALPNAPNSYGRRPIQVMMMGSARVAE R A L G R R 4 1 2 0 0 0 1 2 0 0 3 0 0 0 2 1 0 0 1 0 0 0 17 0 1712.8846 P42771 P42771 30 46 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 2 0.0075156 98 By MS/MS 10 0 1 1 880880 880880 0 1064 857 1097 2748 1952 1952 1 936280 0 ALLEEYNK IQQQDQCVEITEESKALLEEYNKTTMLLSK EITEESKALLEEYNKTTMLLSKQFVQWDEL K A L N K T 1 0 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 8 0 978.50221 O75935 O75935 149 156 DCTN3 Dynactin subunit 3 yes yes 2 0.0032576 148.04 By MS/MS 9 0 1 1 407780 407780 0 1065 338 1098 2749 1953 1953 1 234030 0 ALLEIIMK FLQKAEKLYPLPSARALLEIIMKNGSTAGN YPLPSARALLEIIMKNGSTAGNSPHCRKPS R A L M K N 1 0 0 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 0 0 0 0 8 0 929.56198 Q8TBM8 Q8TBM8 45 52 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 0.004782 129.68 By MS/MS 7.5 0.5 1 1 2 885140 885140 0 1066 1989 1099 2750;2751 1954 1954 1308 1 27378 0 ALLEQLGSSGS PWRKAQLLRVEGEVRALLEQLGSSGS____ GEVRALLEQLGSSGS_______________ R A L G S - 1 0 0 0 0 1 1 2 0 0 3 0 0 0 0 3 0 0 0 0 0 0 11 0 1060.5401 Q86UT6 Q86UT6 965 975 NLRX1 NLR family member X1 yes yes 2 5.9345E-07 185.14 By MS/MS 4 0 1 1 882330 882330 0 1067 1825 1100 2752 1955 1955 1 24087 0 ALLEVVQSGGK EAIETDDLTIKLVIKALLEVVQSGGKNIEL LVIKALLEVVQSGGKNIELAVMRRDQSLKI K A L G K N 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 1 0 0 0 2 0 0 11 0 1099.6237 O14818;Q8TAA3 O14818 194 204 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 2 2.4539E-05 173.24 By MS/MS 7 0.816 1 1 1 3 21996000 21996000 0 1068 129 1101 2753;2754;2755 1956 1956 1 1309500 0 ALLFIPR LAVKHFSVEGQLEFRALLFIPRRAPFDLFE VEGQLEFRALLFIPRRAPFDLFENKKKKNN R A L P R R 1 1 0 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 7 0 828.52216 P08238 P08238 331 337 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.022046 120.76 By MS/MS 5.5 1.12 1 1 1 1 4 45679000 45679000 0 1069 501 1102 2756;2757;2758;2759 1957;1958;1959;1960;1961 1960 5 1465400 0 ALLFVPR LAVKHFSVEGQLEFRALLFVPRRAPFDLFE VEGQLEFRALLFVPRRAPFDLFENRKKKNN R A L P R R 1 1 0 0 0 0 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 7 0 814.50651 P07900 P07900 339 345 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.020123 126.05 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 22832000 22832000 0 1070 494 1103 2760;2761;2762;2763;2764;2765 1962;1963;1964 1963 3 620410 0 ALLGALCQGEASAER WVLAEALLSQSRDPRALLGALCQGEASAER ALLGALCQGEASAERVETLRFLLQRLEDEE R A L E R V 4 1 0 0 1 1 2 2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 15 0 1544.7617 Q13395 Q13395 18 32 TARBP1 Probable methyltransferase TARBP1 yes yes 2 4.9249E-06 153.49 By MS/MS 3 0 1 1 509550 509550 0 1071 1362 1104 2766 1965 1965 1 13302 0 ALLIFLEK GDSTEFMGVNMDVIRALLIFLEKRLHKTHR VNMDVIRALLIFLEKRLHKTHRLKESVAPV R A L E K R 1 0 0 0 0 0 1 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 8 0 945.5899 Q9NPQ8 Q9NPQ8 312 319 RIC8A Synembryn-A yes yes 2 0.0084907 124.08 By MS/MS 5.5 0.5 1 1 2 751920 751920 0 1072 2584 1105 2767;2768 1966 1966 1 21694 0 ALLLDALR NTLGQVGTPGTKDPRALLLDALRSPGLRAL PGTKDPRALLLDALRSPGLRALEAGTAVEL R A L L R S 2 1 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 883.5491 Q8N2G8 Q8N2G8 184 191 GHDC GH3 domain-containing protein yes yes 2 0.0090135 122.13 By MS/MS 6 0.816 1 1 1 3 2852900 2852900 0 1073 1905 1106 2769;2770;2771 1967 1967 1 24025 0 ALLLLLVGGVDQSPR ASIAPEIYGHEDVKKALLLLLVGGVDQSPR ALLLLLVGGVDQSPRGMKIRGNINICLMGD K A L P R G 1 1 0 1 0 1 0 2 0 0 5 0 0 0 1 1 0 0 0 2 0 0 15 0 1549.9192 P33993 P33993 353 367 MCM7 DNA replication licensing factor MCM7 yes yes 2 2.9669E-07 167.11 By MS/MS 6 0 1 1 208080 208080 0 1074 775 1107 2772 1968 1968 1 1622.6 0 ALLLLQR AEKDPDEDCRTLALRALLLLQRLKNRLLPP DCRTLALRALLLLQRLKNRLLPPASP____ R A L Q R L 1 1 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 825.54362 Q9Y4R8 Q9Y4R8 820 826 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.03389 112.27 By MS/MS 4 0 1 1 641550 641550 0 1075 2958 1108 2773 1969 1969 1 17514 0 ALLLQGPSQSSSEA HRDSYPRFLSSPTYRALLLQGPSQSSSEA_ RALLLQGPSQSSSEA_______________ R A L E A - 2 0 0 0 0 2 1 1 0 0 3 0 0 0 1 4 0 0 0 0 0 0 14 0 1386.6991 P49795 P49795 204 217 RGS19 Regulator of G-protein signaling 19 yes yes 2 0.0054546 102.05 By MS/MS 9 0 1 1 153510 153510 0 1076 934 1109 2774 1970 1970 1 88102 0 ALLLTGDFSQAGNK MRTESNLGAKVFFFKALLLTGDFSQAGNKG KALLLTGDFSQAGNKGHHVWVTKDELGDYL K A L N K G 2 0 1 1 0 1 0 2 0 0 3 1 0 1 0 1 1 0 0 0 0 0 14 0 1433.7514 Q9H2W6 Q9H2W6 236 249 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 3.4007E-12 205.12 By MS/MS 7.5 0.5 1 1 2 5380100 5380100 0 1077 2485 1110 2775;2776 1971 1971 1 269990 0 ALLQDKDVIAINQDPLGK LFMSNDLRHISPQAKALLQDKDVIAINQDP QDKDVIAINQDPLGKQGYQLRQGDNFEVWE K A L G K Q 2 0 1 3 0 2 0 1 0 2 3 2 0 0 1 0 0 0 0 1 0 0 18 1 1950.0786 P06280 P06280 309 326 GLA Alpha-galactosidase A yes yes 3 0.0033226 89.877 By MS/MS 6.5 0.5 1 1 2 3938500 3938500 0 1078 476 1111 2777;2778 1972 1972 1 42549 0 ALLQDVLPK ASPESLHYHLCSAPRALLQDVLPKYILDFS LCSAPRALLQDVLPKYILDFSLFAYPLPNV R A L P K Y 1 0 0 1 0 1 0 0 0 0 3 1 0 0 1 0 0 0 0 1 0 0 9 0 995.60153 Q8NCH0 Q8NCH0 346 354 CHST14 Carbohydrate sulfotransferase 14 yes yes 2 0.00051237 153.08 By MS/MS 7 0 1 1 734790 734790 0 1079 1953 1112 2779 1973 1973 1 13131 0 ALLQEFDNAVLSK QMMIDEFNKQSNAFKALLQEFDNAVLSKEN FKALLQEFDNAVLSKENHMQGKLNEKEKMI K A L S K E 2 0 1 1 0 1 1 0 0 0 3 1 0 1 0 1 0 0 0 1 0 0 13 0 1446.7718 Q02241 Q02241 524 536 KIF23 Kinesin-like protein KIF23 yes yes 2 0.0011614 139.89 By MS/MS 4 0 1 1 430030 430030 0 1080 1252 1113 2780 1974 1974 1 11739 0 ALLQQQPEDDSK TAIKRNENMAKGLQRALLQQQPEDDSKRSP LQRALLQQQPEDDSKRSPRPQDLIRLYDII R A L S K R 1 0 0 2 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 12 0 1370.6678 Q9UHB9 Q9UHB9 405 416 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00020038 152.64 By MS/MS 5 0 1 1 1682000 1682000 0 1081 2779 1114 2781 1975 1975 1 69137 0 ALLQQQPEDDSKR TAIKRNENMAKGLQRALLQQQPEDDSKRSP QRALLQQQPEDDSKRSPRPQDLIRLYDIIL R A L K R S 1 1 0 2 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 13 1 1526.7689 Q9UHB9 Q9UHB9 405 417 SRP68 Signal recognition particle subunit SRP68 yes yes 2;3 6.3149E-07 193.28 By MS/MS By matching 5.25 0.433 3 1 3 1 8115000 8096600 18379 1082 2779 1115 2782;2783;2784;2785 1976;1977 1977 2 311890 54383 ALLSHDSGSDHLAFVR FSSSLQNRAEVDKVKALLSHDSGSDHLAFV LLSHDSGSDHLAFVRAVAGWEEVLRWQDRS K A L V R A 2 1 0 2 0 0 0 1 2 0 3 0 0 1 0 3 0 0 0 1 0 0 16 0 1723.8642 Q7L2E3 Q7L2E3 926 941 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 3 0.023426 68.262 By MS/MS 3.5 0.5 1 1 2 2193900 2193900 0 1083 1763 1116 2786;2787 1978 1978 1 58030 0 ALLSSGAVLYK VYFCFKSEPWITKPRALLSSGAVLYKACSV TKPRALLSSGAVLYKACSVIFPLIYSEMKY R A L Y K A 2 0 0 0 0 0 0 1 0 0 3 1 0 0 0 2 0 0 1 1 0 0 11 0 1120.6492 Q14534 Q14534 546 556 SQLE Squalene monooxygenase yes yes 2 0.00091662 134.77 By MS/MS 5.5 0.5 1 1 2 2269900 2269900 0 1084 1434 1117 2788;2789 1979 1979 1 29307 0 ALMGLYHGQVLCK ESQKFGELVMTKESKALMGLYHGQVLCKKN SKALMGLYHGQVLCKKNKFGAPQKDVKHLA K A L C K K 1 0 0 0 1 1 0 2 1 0 3 1 1 0 0 0 0 0 1 1 0 0 13 0 1488.7581 P40939 P40939 338 350 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.034791 70.728 By MS/MS 5 0 1 1 1688800 1688800 0 1085 835 1118 2790 1980 1980 583 1 69418 0 ALMGSPQLVAAVVR AMIVNQLSKKEASRRALMGSPQLVAAVVRT RALMGSPQLVAAVVRTMQNTSDLDTARCTT R A L V R T 3 1 0 0 0 1 0 1 0 0 2 0 1 0 1 1 0 0 0 3 0 0 14 0 1410.8017 P14923 P14923 178 191 JUP Junction plakoglobin yes yes 2 0.00076275 121.29 By MS/MS By MS/MS 4.17 1.34 1 1 1 2 1 1 5 976920 588200 388730 1086 595 1119 2791;2792;2793;2794;2795;2796 1981;1982;1983;1984 1981 383 4 24177 794490 ALMLQGVDLLADAVAVTMGPK TRAYAKDVKFGADARALMLQGVDLLADAVA VDLLADAVAVTMGPKGRTVIIEQSWGSPKV R A L P K G 4 0 0 2 0 1 0 2 0 0 4 1 2 0 1 0 1 0 0 3 0 0 21 0 2112.1323 P10809 P10809 38 58 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 6.7519E-51 252.82 By MS/MS 6 0 8 8 85278000 85278000 0 1087 544 1120;1121;1122 2797;2798;2799;2800;2801;2802;2803;2804 1985;1986;1987;1988;1989;1990;1991;1992;1993;1994;1995;1996;1997 1988 321;322 13 665000 0 ALMLQGVDLLADAVAVTMGPKGR TRAYAKDVKFGADARALMLQGVDLLADAVA LLADAVAVTMGPKGRTVIIEQSWGSPKVTK R A L G R T 4 1 0 2 0 1 0 3 0 0 4 1 2 0 1 0 1 0 0 3 0 0 23 1 2325.2549 P10809 P10809 38 60 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.011142 53.342 By MS/MS 6 0 1 1 395060 395060 0 1088 544 1123 2805 1998 1998 321;322 1 3080.7 0 ALNEACESVIQTACK LIQETDPGADYRIDRALNEACESVIQTACK ALNEACESVIQTACKHIRSGDPMILSCLME R A L C K H 3 0 1 0 2 1 2 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 15 0 1692.7811 Q92896 Q92896 502 516 GLG1 Golgi apparatus protein 1 yes yes 2 2.3108E-28 272.59 By MS/MS 2 0.816 1 1 1 3 748780 748780 0 1089 2087 1124 2806;2807;2808 1999 1999 1 22054 0 ALNHEIEELEK IKLQEELSENDKKIKALNHEIEELEKRKDK KKIKALNHEIEELEKRKDKETGGILRSLED K A L E K R 1 0 1 0 0 0 4 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1323.667 O95347 O95347 276 286 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2;3 0.00017407 149.41 By MS/MS 3.33 0.471 2 1 3 1241100 1241100 0 1090 385 1125 2809;2810;2811 2000;2001 2000 2 32460 0 ALNILQSTNMAFGK GMKALVTLSSGDMRRALNILQSTNMAFGKV RALNILQSTNMAFGKVTEETVYTCTGHPLK R A L G K V 2 0 2 0 0 1 0 1 0 1 2 1 1 1 0 1 1 0 0 0 0 0 14 0 1506.7864 P40937 P40937 216 229 RFC5 Replication factor C subunit 5 yes yes 2 3.1728E-08 186.46 By MS/MS 7.5 0.5 1 1 2 559060 559060 0 1091 833 1126 2812;2813 2002 2002 580 1 25465 0 ALNQGTR LLSGLLDAFDGHAARALNQGTRFGAMLDML AFDGHAARALNQGTRFGAMLDMLTDRCSTM R A L T R F 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 758.4035 O14735 O14735 56 62 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes yes 2 0.027181 116.9 By MS/MS By matching 5.25 3.77 1 1 2 3 1 2662400 2642300 20091 1092 123 1127 2814;2815;2816;2817 2003;2004;2005 2003 3 656310 216520 ALPAVQQNNLDEDLIR DAAELVALAQAVNARALPAVQQNNLDEDLI LPAVQQNNLDEDLIRKLAYVAAGDLAPINA R A L I R K 2 1 2 2 0 2 1 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 16 0 1807.9428 P22314 P22314 369 384 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 8.79E-15 233.37 By MS/MS 4.5 0.5 1 1 2 1545700 1545700 0 1093 658 1128 2818;2819 2006 2006 1 44749 0 ALPSEELNR VEYTLGEESEAPGQRALPSEELNRQLEKLL EAPGQRALPSEELNRQLEKLLKEGSSNQRV R A L N R Q 1 1 1 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 9 0 1027.5298 Q04637 Q04637 1437 1445 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.018406 97.635 By MS/MS 2 0 1 1 18111000 18111000 0 1094 1264 1129 2820 2007 2007 1 900200 0 ALPSEELNRQLEK VEYTLGEESEAPGQRALPSEELNRQLEKLL QRALPSEELNRQLEKLLKEGSSNQRVFDWI R A L E K L 1 1 1 0 0 1 3 0 0 0 3 1 0 0 1 1 0 0 0 0 0 0 13 1 1525.81 Q04637 Q04637 1437 1449 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0013592 150.09 By MS/MS 2.4 1.02 1 2 1 1 5 3398100 3398100 0 1095 1264 1130 2821;2822;2823;2824;2825 2008;2009;2010 2008 3 146510 0 ALPSQGLSSSAVLEK SKNMSFLKVDKEYVKALPSQGLSSSAVLEK ALPSQGLSSSAVLEKLKEYSSMDAFWQEGR K A L E K L 2 0 0 0 0 1 1 1 0 0 3 1 0 0 1 4 0 0 0 1 0 0 15 0 1485.8039 O95470 O95470 115 129 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.004161 107.46 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 10350000 10350000 0 1096 395 1131 2826;2827;2828;2829;2830;2831 2011 2011 1 111360 0 ALPTDWLIYDEMTR YKKIPPANGQAAAIKALPTDWLIYDEMTRA KALPTDWLIYDEMTRAHRIANIRCCSAVTP K A L T R A 1 1 0 2 0 0 1 0 0 1 2 0 1 0 1 0 2 1 1 0 0 0 14 0 1722.8287 Q9H6S0 Q9H6S0 1029 1042 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.044694 63.727 By MS/MS 3 0 1 1 94834 94834 0 1097 2511 1132 2832 2012 2012 1 2475.7 0 ALQAAIQQLAEAQPEATAK FCLTLHRYRDAASRRALQAAIQQLAEAQPE AIQQLAEAQPEATAKNLLHSLQSSGIGSKA R A L A K N 7 0 0 0 0 4 2 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 19 0 1951.0375 Q92616 Q92616 69 87 GCN1L1 Translational activator GCN1 yes yes 2;3 1.1155E-25 215.48 By MS/MS 2.86 1.25 1 2 2 1 1 7 4492300 4492300 0 1098 2068 1133 2833;2834;2835;2836;2837;2838;2839 2013;2014;2015 2015 3 177810 0 ALQAQEIECR INLRRRQDRRERMLRALQAQEIECRLVEAV ERMLRALQAQEIECRLVEAVDGKAMNTSQV R A L C R L 2 1 0 0 1 2 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1216.587 Q8NBJ5 Q8NBJ5 361 370 COLGALT1 Procollagen galactosyltransferase 1 yes yes 2 1.2223E-06 180.09 By MS/MS 4.5 0.5 1 1 2 1987300 1987300 0 1099 1941 1134 2840;2841 2016 2016 1 72760 0 ALQEGDLASSR EFLVNHMDLAKGHIKALQEGDLASSRGIEA GHIKALQEGDLASSRGIEACTNAADALLQC K A L S R G 2 1 0 1 0 1 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1145.5677 Q9NV70 Q9NV70 289 299 EXOC1 Exocyst complex component 1 yes yes 2 0.0028574 136.96 By MS/MS 4 0 1 1 0 0 0 1100 2645 1135 2842 2017 2017 1 0 0 ALQFLEEVK HPRIITEGFEAAKEKALQFLEEVKVSREMD EAAKEKALQFLEEVKVSREMDRETLIDVAR K A L V K V 1 0 0 0 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1075.5914 P40227 P40227 130 138 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.00025155 158.76 By MS/MS 5.12 2.71 1 1 1 1 1 1 1 1 8 161460000 161460000 0 1101 828 1136 2843;2844;2845;2846;2847;2848;2849;2850 2018;2019;2020;2021;2022;2023 2022 6 1829700 0 ALQFLEEVKVSR HPRIITEGFEAAKEKALQFLEEVKVSREMD KEKALQFLEEVKVSREMDRETLIDVARTSL K A L S R E 1 1 0 0 0 1 2 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 12 1 1417.7929 P40227 P40227 130 141 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 0.0035772 139.31 By MS/MS 6 0 2 2 48339000 48339000 0 1102 828 1137 2851;2852 2024;2025 2025 2 376950 0 ALQGISGLK GIFAVLKEKCGQIHKALQGISGLKVVGESL CGQIHKALQGISGLKVVGESLSPAFHLQLE K A L L K V 1 0 0 0 0 1 0 2 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 885.52837 O15269 O15269 376 384 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.010364 104.01 By MS/MS By matching 6.4 1.02 1 2 1 1 3 2 21554000 21518000 36445 1103 165 1138 2853;2854;2855;2856;2857 2026 2026 1 179300 109730 ALQIPEVYLR EHIQRLSKVVTANHRALQIPEVYLREAPWP TANHRALQIPEVYLREAPWPSAQSEIRTIS R A L L R E 1 1 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 0 1 1 0 0 10 0 1200.6867 Q14C86 Q14C86 1361 1370 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.033694 90.601 By MS/MS 3 0.816 1 1 1 3 565120 565120 0 1104 1455 1139 2858;2859;2860 2027 2027 1 22342 0 ALQLLYDLR KQIKKEGAFPVTQNRALQLLYDLRYLNIVL PVTQNRALQLLYDLRYLNIVLTAKGDEVKS R A L L R Y 1 1 0 1 0 1 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 9 0 1103.6339 Q8WTW3 Q8WTW3 806 814 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.0044941 120.31 By MS/MS 4 0 1 1 0 0 0 1105 2010 1140 2861 2028 2028 1 0 0 ALQLSEPGK FSAYLGSEQYKLLIKALQLSEPGKEIH___ YKLLIKALQLSEPGKEIH____________ K A L G K E 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 9 0 941.5182 Q9H061 Q9H061 184 192 TMEM126A Transmembrane protein 126A yes yes 2 0.021239 96.034 By MS/MS 9 0 1 1 2489400 2489400 0 1106 2447 1141 2862 2029 2029 1 1428700 0 ALQLSEPGKEIH FSAYLGSEQYKLLIKALQLSEPGKEIH___ LIKALQLSEPGKEIH_______________ K A L I H - 1 0 0 0 0 1 2 1 1 1 2 1 0 0 1 1 0 0 0 0 0 0 12 1 1320.7038 Q9H061 Q9H061 184 195 TMEM126A Transmembrane protein 126A yes yes 3 0.026436 72.089 By MS/MS 9 0 1 1 3963900 3963900 0 1107 2447 1142 2863 2030 2030 1 2274900 0 ALQNAVTTFVNR FHNGESEESHEQFLKALQNAVTTFVNRMKS FLKALQNAVTTFVNRMKSNHMRGRSITNDS K A L N R M 2 1 2 0 0 1 0 0 0 0 1 0 0 1 0 0 2 0 0 2 0 0 12 0 1332.715 O14964 O14964 411 422 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 2 5.9654E-05 163.9 By MS/MS 4.5 0.5 1 1 2 615630 615630 0 1108 137 1143 2864;2865 2031 2031 1 18619 0 ALQQAYDVLIK ICLPAYVRVSHPKVRALQQAYDVLIKMRKT PKVRALQQAYDVLIKMRKTDVDPLDEVCYR R A L I K M 2 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1260.7078 Q5VZ89 Q5VZ89 799 809 DENND4C DENN domain-containing protein 4C yes yes 2 0.0087046 99.53 By MS/MS 2.5 0.5 1 1 2 263870 263870 0 1109 1659 1144 2866;2867 2032 2032 1 9409.5 0 ALQQEQEIEQR LKAEHTNRLKNAFVKALQQEQEIEQRLQQQ AFVKALQQEQEIEQRLQQQAALSPTTAPAV K A L Q R L 1 1 0 0 0 4 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1370.679 Q8WXI9;Q86YP4 Q8WXI9 468 478 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha no no 2 2.4539E-05 173.24 By MS/MS By matching 5 0 2 1 1 7714800 7671800 43057 1110 2047;1848 1145 2868;2869 2033 2033 1 315340 127400 ALQQNGAPGIAK NFWYHSYTKGKRLPRALQQNGAPGIAKVKA LPRALQQNGAPGIAKVKAN___________ R A L A K V 3 0 1 0 0 2 0 2 0 1 1 1 0 0 1 0 0 0 0 0 0 0 12 0 1166.6408 Q9BW60 Q9BW60 264 275 ELOVL1 Elongation of very long chain fatty acids protein 1 yes yes 2 0.00079015 135.71 By MS/MS 1.5 0.5 1 1 2 433610 433610 0 1111 2388 1146 2870;2871 2034 2034 1 21266 0 ALQQQQQQQQQK QLREEQRRQQRELMKALQQQQQQQQQKLSG LMKALQQQQQQQQQKLSGWGNVSKPSGTTK K A L Q K L 1 0 0 0 0 9 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 0 1482.7539 Q6Y7W6 Q6Y7W6 974 985 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 5.1755E-33 299.84 By MS/MS 3.5 0.5 1 1 2 562510 562510 0 1112 1736 1147 2872;2873 2035 2035 1 14764 0 ALQQYTLEPSEKPFDLK YILNGLTVSIPGLERALQQYTLEPSEKPFD QQYTLEPSEKPFDLKSVPLATAPMAEQRTE R A L L K S 1 0 0 1 0 2 2 0 0 0 3 2 0 1 2 1 1 0 1 0 0 0 17 1 2006.0361 Q9Y678 Q9Y678 561 577 COPG1 Coatomer subunit gamma-1 yes yes 2;3 1.9833E-09 159.66 By MS/MS 5.29 1.03 2 2 2 1 7 12905000 12905000 0 1113 2996 1148 2874;2875;2876;2877;2878;2879;2880 2036;2037 2037 2 342820 0 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK GARGKGRTQLSLLPRALQRPSAAAPQAENG AAPAVAAPAATEAPKMSNADFAKLFLRK__ R A L P K M 14 1 1 0 0 2 2 1 0 0 1 1 0 0 6 1 1 0 0 1 0 0 32 1 2964.5417 Q15020 Q15020 919 950 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 3 1.2491E-05 66.124 By MS/MS 3 0 1 1 2615500 2615500 0 1114 1463 1149 2881 2038;2039 2038 2 68279 0 ALQSGQCAGAALDVFTEEPPRDR NCARGGIVDEGALLRALQSGQCAGAALDVF GAALDVFTEEPPRDRALVDHENVISCPHLG R A L D R A 4 2 0 2 1 2 2 2 0 0 2 0 0 1 2 1 1 0 0 1 0 0 23 1 2487.1812 O43175 O43175 248 270 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 0.013111 85.166 By MS/MS 6.5 0.5 1 1 2 52017000 52017000 0 1115 185 1150 2882;2883 2040;2041 2040 2 409780 0 ALQSQSWK GIRLYLQELITITQKALQSQSWKMKAQGAI LITITQKALQSQSWKMKAQGAIAMASIAKQ K A L W K M 1 0 0 0 0 2 0 0 0 0 1 1 0 0 0 2 0 1 0 0 0 0 8 0 946.48723 Q5VYK3 Q5VYK3 1535 1542 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.019656 104.2 By MS/MS 3 0 1 1 656150 656150 0 1116 1657 1151 2884 2042 2042 1 17129 0 ALQSVGQIVGEVLK KELTKQYEKSENDLKALQSVGQIVGEVLKQ KALQSVGQIVGEVLKQLTEEKFIVKATNGP K A L L K Q 1 0 0 0 0 2 1 2 0 1 2 1 0 0 0 1 0 0 0 3 0 0 14 0 1439.8348 P62333 P62333 49 62 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.0052944 102.73 By MS/MS 7 0 1 1 87057 87057 0 1117 1133 1152 2885 2043 2043 1 1555.7 0 ALQSYIQGK SWNLARFVFTYKGLRALQSYIQGKTYPAHA TYKGLRALQSYIQGKTYPAHAFLAAFLGGI R A L G K T 1 0 0 0 0 2 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 9 0 1006.5447 Q9Y6I8 Q9Y6I8 90 98 PXMP4 Peroxisomal membrane protein 4 yes yes 2 0.001203 138.4 By MS/MS 9 0.816 1 1 1 3 3681400 3681400 0 1118 3006 1153 2886;2887;2888 2044 2044 1 702040 0 ALQVMEK YHNMPLIWKPGYLDRALQVMEKVAASPEDI WKPGYLDRALQVMEKVAASPEDIKLCREAL R A L E K V 1 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 7 0 817.43677 Q92552 Q92552 259 265 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.01699 134.66 By MS/MS 7 0 1 1 1333200 1333200 0 1119 2059 1154 2889 2045 2045 1 23824 0 ALQYACGNALVCDNVEDAR LVIDVIRYEPPHIKKALQYACGNALVCDNV ACGNALVCDNVEDARRIAFGGHQRHKTVAL K A L A R R 4 1 2 2 2 1 1 1 0 0 2 0 0 0 0 0 0 0 1 2 0 0 19 0 2137.9521 Q14683 Q14683 608 626 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 9.436E-26 218.21 By MS/MS 3 0 1 1 873950 873950 0 1120 1440 1155 2890 2046 2046 1 22814 0 ALRETLPAEQDLTTK FMECNLNELVKHGLRALRETLPAEQDLTTK ALRETLPAEQDLTTKNVSIGIVGKDLEFTI R A L T K N 2 1 0 1 0 1 2 0 0 0 3 1 0 0 1 0 3 0 0 0 0 0 15 1 1684.8996 P25786 P25786 194 208 PSMA1 Proteasome subunit alpha type-1 yes yes 2;3 0.0056586 108.23 By MS/MS 8.33 0.471 2 1 3 8052100 8052100 0 1121 688 1156 2891;2892;2893 2047;2048 2047 2 581570 0 ALRQEFAASR IIVMGVQVVGRAFARALRQEFAASRAAADA RAFARALRQEFAASRAAADARGRAGHRSAA R A L S R A 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 1 1147.6098 Q9Y3D7 Q9Y3D7 23 32 PAM16 Mitochondrial import inner membrane translocase subunit TIM16 yes yes 2;3 0.012108 111.27 By MS/MS 10 0 2 2 1052300 1052300 0 1122 2933 1157 2894;2895 2049;2050 2049 2 1118500 0 ALSAIADLLTNEHER WTYGRYIRSALRQEKALSAIADLLTNEHER ALSAIADLLTNEHERVVKAASGALRNLAVD K A L E R V 3 1 1 1 0 0 2 0 1 1 3 0 0 0 0 1 1 0 0 0 0 0 15 0 1651.8529 O60716 O60716 711 725 CTNND1 Catenin delta-1 yes yes 2 1.6448E-92 342.32 By MS/MS 4.5 1.12 1 1 1 1 4 1776900 1776900 0 1123 260 1158 2896;2897;2898;2899 2051 2051 1 40441 0 ALSAVSTQQK SRLQYSRRRVGELERALSAVSTQQKKADRY GELERALSAVSTQQKKADRYNKELTKERDA R A L Q K K 2 0 0 0 0 2 0 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 10 0 1031.5611 Q08379 Q08379 271 280 GOLGA2 Golgin subfamily A member 2 yes yes 2 0.0010678 120.31 By MS/MS 3 0 1 1 513120 513120 0 1124 1288 1159 2900 2052 2052 1 13395 0 ALSDADVQKQIK ______________________________ ______________________________ M A L I K H 2 0 0 2 0 2 0 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 12 1 1314.7143 P36543 P36543 2 13 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 2 9.7516E-07 176.6 By MS/MS 8 0 1 1 3030300 3030300 0 1125 806 1160 2901 2053 2053 1 199910 0 ALSDLQLIK DGTHSSAYCPDYTVRALSDLQLIKVTRLQY PDYTVRALSDLQLIKVTRLQYLNALLATRA R A L I K V 1 0 0 1 0 1 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 0 999.59645 Q8NE01 Q8NE01 632 640 CNNM3 Metal transporter CNNM3 yes yes 2 0.0053784 114.89 By MS/MS 4.5 0.5 1 1 2 468760 468760 0 1126 1960 1161 2902;2903 2054 2054 1 18542 0 ALSEPLSAAQLR MAAGAGAGSAPRWLRALSEPLSAAQLRRLE WLRALSEPLSAAQLRRLEEHRYSAAGVSLL R A L L R R 3 1 0 0 0 1 1 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 12 0 1254.6932 Q8WUD6 Q8WUD6 16 27 CHPT1 Cholinephosphotransferase 1 yes yes 2 8.1264E-09 195.36 By MS/MS 2 0.816 1 1 1 3 739260 739260 0 1127 2015 1162 2904;2905;2906 2055 2055 1 30813 0 ALSINTLVK CLLDKGMMSTVTEVRALSINTLVKISKSAG TVTEVRALSINTLVKISKSAGAMLKPHAPK R A L V K I 1 0 1 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 9 0 957.58588 Q5VYK3 Q5VYK3 1272 1280 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0053445 132.76 By MS/MS 2.5 0.5 1 1 2 2600700 2600700 0 1128 1657 1163 2907;2908 2056 2056 1 71593 0 ALSPLEEWLR SSAQDPQAVLGALGRALSPLEEWLRLHTYL GALGRALSPLEEWLRLHTYLAGEAPTLADL R A L L R L 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 1 0 1 0 0 0 0 10 0 1212.6503 P26640 P26640 138 147 VARS Valine--tRNA ligase yes yes 2 0.0096415 94.309 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 953440 953440 0 1129 699 1164 2909;2910;2911;2912;2913;2914 2057 2057 1 25313 0 ALSQGVESVK VSKGGEKLGRTAAFRALSQGVESVKKEIDD TAAFRALSQGVESVKKEIDDSVLGQTGPYR R A L V K K 1 0 0 0 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 10 0 1016.5502 O43615 O43615 178 187 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00099833 122.94 By MS/MS 7.5 0.5 1 1 2 5592300 5592300 0 1130 209 1165 2915;2916 2058 2058 1 112980 0 ALSQGVESVKK VSKGGEKLGRTAAFRALSQGVESVKKEIDD AAFRALSQGVESVKKEIDDSVLGQTGPYRR R A L K K E 1 0 0 0 0 1 1 1 0 0 1 2 0 0 0 2 0 0 0 2 0 0 11 1 1144.6452 O43615 O43615 178 188 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 8.4589E-05 173.64 By MS/MS By matching 7.78 1.03 5 2 1 1 7 2 49627000 49545000 82236 1131 209 1166 2917;2918;2919;2920;2921;2922;2923;2924;2925 2059;2060;2061;2062 2060 4 1068000 337590 ALSQLAEVEEK AAMLGNSEDHTALSRALSQLAEVEEKIDQL ALSRALSQLAEVEEKIDQLHQEQAFADFYM R A L E K I 2 0 0 0 0 1 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1215.6347 O60749;Q13596 O60749 363 373 SNX2;SNX1 Sorting nexin-2;Sorting nexin-1 no no 2 1.7603E-07 192.5 By MS/MS 5 0 1 1 2887000 2887000 0 1132 262;1385 1167 2926 2063 2063 1 118670 0 ALSQQDGGPLDSTFI EQEKSALIKQLFEARALSQQDGGPLDSTFI ALSQQDGGPLDSTFI_______________ R A L F I - 1 0 0 2 0 2 0 2 0 1 2 0 0 1 1 2 1 0 0 0 0 0 15 0 1547.7468 Q86UD0 Q86UD0 380 394 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 2 0.030674 75.788 By MS/MS 7 0 1 1 127960 127960 0 1133 1820 1168 2927 2064 2064 1 2286.7 0 ALSSGGSITSPPLSPALPK AAETQTLNFGPEWLRALSSGGSITSPPLSP GGSITSPPLSPALPKYKLADYRYGREEMLA R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 Q6Y7W6 Q6Y7W6 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 1.4697E-07 177.42 By MS/MS 3 0 1 1 462440 462440 0 1134 1736 1169 2928 2065 2065 1 12072 0 ALSSQHQAR RAVQKLRREVEKAKRALSSQHQARIEIESF VEKAKRALSSQHQARIEIESFYEGEDFSET R A L A R I 2 1 0 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 996.51009 P11021 P11021 298 306 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 1.0469E-05 176.44 By MS/MS By MS/MS 5.57 0.728 4 2 1 6 1 18004000 17975000 29593 1135 545 1170 2929;2930;2931;2932;2933;2934;2935 2066;2067;2068;2069;2070;2071 2068 6 660150 87567 ALSTDPAAPNLK KGISMSSSKLLLAAKALSTDPAAPNLKSQL AAKALSTDPAAPNLKSQLAAAARAVTDSIN K A L L K S 3 0 1 1 0 0 0 0 0 0 2 1 0 0 2 1 1 0 0 0 0 0 12 0 1196.6401 Q9Y490 Q9Y490 1321 1332 TLN1 Talin-1 yes yes 2 0.00080442 135.55 By MS/MS 2.5 1.12 1 1 1 1 4 4251300 4251300 0 1136 2947 1171 2936;2937;2938;2939 2072;2073;2074 2073 3 185880 0 ALSTDSIER YSLEGYGTDAVIYIKALSTDSIERLPVYNK AVIYIKALSTDSIERLPVYNKAAWKHYNTN K A L E R L 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 9 0 990.49819 Q15118 Q15118 391 399 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.0020363 129.42 By MS/MS 7 0 1 1 1519000 1519000 0 1137 1479 1172 2940 2075 2075 1 27146 0 ALSTDSIERLPVYNK YSLEGYGTDAVIYIKALSTDSIERLPVYNK ALSTDSIERLPVYNKAAWKHYNTNHEADDW K A L N K A 1 1 1 1 0 0 1 0 0 1 2 1 0 0 1 2 1 0 1 1 0 0 15 1 1704.9046 Q15118 Q15118 391 405 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.014843 130.69 By MS/MS 7.5 0.5 1 1 2 1139300 1139300 0 1138 1479 1173 2941;2942 2076 2076 1 34739 0 ALSTFFVENSLR ETRLDNDKEMLEALKALSTFFVENSLRTRR ALKALSTFFVENSLRTRRNLRGDIERKSLA K A L L R T 1 1 1 0 0 0 1 0 0 0 2 0 0 2 0 2 1 0 0 1 0 0 12 0 1382.7194 Q9Y2V7 Q9Y2V7 59 70 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 2.9406E-07 186.87 By MS/MS 5 0 1 1 562570 562570 0 1139 2903 1174 2943 2077 2077 1 23124 0 ALSTGEKGFGYK ELFADKVPKTAENFRALSTGEKGFGYKGSC NFRALSTGEKGFGYKGSCFHRIIPGFMCQG R A L Y K G 1 0 0 0 0 0 1 3 0 0 1 2 0 1 0 1 1 0 1 0 0 0 12 1 1256.6401 P62937 P62937 38 49 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.022402 115.91 By MS/MS 10 0 1 1 204070 204070 0 1140 1163 1175 2944 2078 2078 1 216900 0 ALSVGLVK SAKITVNEVELLVMKALSVGLVKGSIDEVD VELLVMKALSVGLVKGSIDEVDKRVHMTWV K A L V K G 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 8 0 785.50109 Q9UNM6 Q9UNM6 314 321 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.01622 111.65 By MS/MS 7 0 1 1 8486700 8486700 0 1141 2845 1176 2945 2079 2079 1 151660 0 ALTALFK GVMVPAPIQDLEALRALTALFKEQRNRETA IQDLEALRALTALFKEQRNRETAPRTIFQR R A L F K E 2 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 7 0 762.46398 Q9UBB4 Q9UBB4 28 34 ATXN10 Ataxin-10 yes yes 2 0.012142 148.07 By MS/MS 7 0 1 1 2423200 2423200 0 1142 2744 1177 2946 2080 2080 1 43302 0 ALTALFKEQR GVMVPAPIQDLEALRALTALFKEQRNRETA LEALRALTALFKEQRNRETAPRTIFQRVLD R A L Q R N 2 1 0 0 0 1 1 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 10 1 1175.6663 Q9UBB4 Q9UBB4 28 37 ATXN10 Ataxin-10 yes yes 2 0.027547 111.61 By MS/MS 7 0 1 1 857270 857270 0 1143 2744 1178 2947 2081 2081 1 15320 0 ALTGDAAIQPR SVVGYTNCGKTTLIKALTGDAAIQPRDQLF TLIKALTGDAAIQPRDQLFATLDVTAHAGT K A L P R D 3 1 0 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 11 0 1111.5986 O43824 O43824 313 323 GTPBP6 Putative GTP-binding protein 6 yes yes 2 9.1178E-05 163.16 By MS/MS By MS/MS 5.6 2.42 1 2 1 1 4 1 17738000 17714000 23102 1144 228 1179 2948;2949;2950;2951;2952 2082;2083;2084;2085;2086 2085 5 223180 70853 ALTGGIAHLFK LNLDKMMEQKSTAVKALTGGIAHLFKQNKV TAVKALTGGIAHLFKQNKVVHVNGYGKITG K A L F K Q 2 0 0 0 0 0 0 2 1 1 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1126.6499 P09622 P09622 133 143 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 0.0013616 141.2 By MS/MS 6 0 1 1 3220600 3220600 0 1145 518 1180 2953 2087 2087 1 25114 0 ALTHIDHSLSR VQGKKGEDVLGSVRRALTHIDHSLSRQNCP SVRRALTHIDHSLSRQNCPFLAGETESLAD R A L S R Q 1 1 0 1 0 0 0 0 2 1 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1248.6575 P56192 P56192 120 130 MARS Methionine--tRNA ligase, cytoplasmic yes yes 3 0.023832 78.342 By MS/MS 3.5 0.5 1 1 2 2397300 2397300 0 1146 1042 1181 2954;2955 2088 2088 1 65232 0 ALTLGALTLPLAR PQSQELDVQVKDDSRALTLGALTLPLARLL SRALTLGALTLPLARLLTAPELILDQWFQL R A L A R L 3 1 0 0 0 0 0 1 0 0 5 0 0 0 1 0 2 0 0 0 0 0 13 0 1308.8129 Q9BSJ8 Q9BSJ8 551 563 ESYT1 Extended synaptotagmin-1 yes yes 2 0.00063575 135.86 By MS/MS 3.5 0.5 1 1 2 202730 202730 0 1147 2339 1182 2956;2957 2089;2090 2089 2 5454.1 0 ALTLIAGSPLK LERLKNEITRLTTVKALTLIAGSPLKIDLR TTVKALTLIAGSPLKIDLRPVLGEGVPILA K A L L K I 2 0 0 0 0 0 0 1 0 1 3 1 0 0 1 1 1 0 0 0 0 0 11 0 1082.6699 Q86VP6 Q86VP6 631 641 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 1.5812E-10 196.88 By MS/MS 4 0.816 1 1 1 3 3557100 3557100 0 1148 1829 1183 2958;2959;2960 2091;2092 2092 2 99570 0 ALTLPGSSENEYIMK EIAPFVEILLTNLFKALTLPGSSENEYIMK ALTLPGSSENEYIMKAIMRSFSLLQEAIIP K A L M K A 1 0 1 0 0 0 2 1 0 1 2 1 1 0 1 2 1 0 1 0 0 0 15 0 1651.8127 P55060 P55060 560 574 CSE1L Exportin-2 yes yes 2 2.1381E-10 190.66 By MS/MS 4 0 2 2 3982400 3982400 0 1149 1025 1184;1185 2961;2962 2093;2094 2093 795 2 108710 0 ALTNLPHTDFTLCK PAFFQTTVTAQILLKALTNLPHTDFTLCKC KALTNLPHTDFTLCKCMIDQAHQEERPIRQ K A L C K C 1 0 1 1 1 0 0 0 1 0 3 1 0 1 1 0 3 0 0 0 0 0 14 0 1629.8185 Q9UBQ5 Q9UBQ5 73 86 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 7.3252E-05 176.99 By MS/MS 9 0 1 1 979430 979430 0 1150 2755 1186 2963 2095 2095 1 562100 0 ALTQFPLPK RGSSFEMTDDDSAIRALTQFPLPKNLLAKV DDSAIRALTQFPLPKNLLAKVIQIATSSST R A L P K N 1 0 0 0 0 1 0 0 0 0 2 1 0 1 2 0 1 0 0 0 0 0 9 0 1013.591 Q7L2E3 Q7L2E3 238 246 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.023334 94.85 By MS/MS 3.5 0.5 1 1 2 2244900 2244900 0 1151 1763 1187 2964;2965 2096 2096 1 59103 0 ALTSEIALLQSR STLNSGKKSLETEHKALTSEIALLQSRLKT EHKALTSEIALLQSRLKTEGSDLCDRVSEM K A L S R L 2 1 0 0 0 1 1 0 0 1 3 0 0 0 0 2 1 0 0 0 0 0 12 0 1300.7351 P04843 P04843 525 536 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 9.8091E-33 252.16 By MS/MS 5.45 2.74 1 1 1 1 2 1 1 1 1 1 11 16917000 16917000 0 1152 458 1188 2966;2967;2968;2969;2970;2971;2972;2973;2974;2975;2976 2097;2098;2099;2100;2101 2099 5 857480 0 ALTVPELTQQMFDAK PGFAPLTSRGSQQYRALTVPELTQQMFDAK ALTVPELTQQMFDAKNMMAACDPRHGRYLT R A L A K N 2 0 0 1 0 2 1 0 0 0 2 1 1 1 1 0 2 0 0 1 0 0 15 0 1690.86 P68371;P04350;Q13509 P68371 283 297 TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 2;3 2.289E-14 203.88 By MS/MS By matching 6.59 1.68 1 1 1 6 3 3 1 1 16 1 138930000 138800000 127880 1153 1187;451;1377 1189;1190 2977;2978;2979;2980;2981;2982;2983;2984;2985;2986;2987;2988;2989;2990;2991;2992;2993 2102;2103;2104;2105;2106;2107;2108;2109;2110;2111;2112 2110 231 11 1531500 392210 ALTVPELTQQMFDAR PGFAPLTSRGSQQYRALTVPELTQQMFDAR ALTVPELTQQMFDARNMMAACDPRHGRYLT R A L A R N 2 1 0 1 0 2 1 0 0 0 2 0 1 1 1 0 2 0 0 1 0 0 15 0 1718.8662 Q9BUF5 Q9BUF5 283 297 TUBB6 Tubulin beta-6 chain yes yes 2;3 9.6585E-29 241.84 By MS/MS 6.6 0.8 3 1 1 5 7881100 7881100 0 1154 2363 1191;1192 2994;2995;2996;2997;2998 2113;2114;2115;2116;2117 2113 1474 5 89589 0 ALTVPELTQQMFDSK PGFAPLTSRGSQQYRALTVPELTQQMFDSK ALTVPELTQQMFDSKNMMAACDPRHGRYLT R A L S K N 1 0 0 1 0 2 1 0 0 0 2 1 1 1 1 1 2 0 0 1 0 0 15 0 1706.8549 Q13885;Q9BVA1 Q13885 283 297 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 1.2708E-20 219.43 By MS/MS 6.8 0.748 2 2 1 5 17337000 17337000 0 1155 1400;2375 1193;1194 2999;3000;3001;3002;3003 2118;2119;2120;2121;2122;2123 2118 1073 6 182330 0 ALTVPELTQQVFDAK PGFAPLTSRGSQQYRALTVPELTQQVFDAK ALTVPELTQQVFDAKNMMAACDPRHGRYLT R A L A K N 2 0 0 1 0 2 1 0 0 0 2 1 0 1 1 0 2 0 0 2 0 0 15 0 1658.8879 P07437 P07437 283 297 TUBB Tubulin beta chain yes yes 2;3 1.9341E-28 250.69 By MS/MS By matching 6.27 1.76 2 2 2 6 5 3 1 1 21 1 894350000 894280000 65172 1156 490 1195 3004;3005;3006;3007;3008;3009;3010;3011;3012;3013;3014;3015;3016;3017;3018;3019;3020;3021;3022;3023;3024;3025 2124;2125;2126;2127;2128;2129;2130;2131;2132;2133;2134;2135;2136;2137;2138;2139;2140;2141;2142;2143;2144;2145;2146;2147;2148;2149;2150;2151;2152 2133 28 8086100 199880 ALVASVR ______________________________ ______________________________ M A L V R V 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 714.43882 P42126 P42126 2 8 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 2 0.051174 76.847 By MS/MS 8 0 1 1 1979500 1979500 0 1157 844 1196 3026 2153 2153 1 130590 0 ALVAVLLSR HPHRLTGNKVQQYHRALVAVLLSRTWHVRR VQQYHRALVAVLLSRTWHVRRQAQQTVRKL R A L S R T 2 1 0 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 9 0 940.60695 Q92616 Q92616 568 576 GCN1L1 Translational activator GCN1 yes yes 2 0.008925 119.27 By MS/MS 2.5 0.5 1 1 2 225870 225870 0 1158 2068 1197 3027;3028 2154 2154 1 9149.7 0 ALVAYYQK GHVAQIYAIRQSISKALVAYYQKYVDEASK IRQSISKALVAYYQKYVDEASKKEIKDILI K A L Q K Y 2 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 2 1 0 0 8 0 954.51747 P62249 P62249 91 98 RPS16 40S ribosomal protein S16 yes yes 2 0.0040703 141.98 By MS/MS 10 0 1 1 16160000 16160000 0 1159 1120 1198 3029 2155 2155 1 17177000 0 ALVDELNR QSHLQAGVSKLNEAKALVDELNRKAGEQSV SKLNEAKALVDELNRKAGEQSVLLKTKQDE K A L N R K 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 928.49779 Q8NCM8 Q8NCM8 2909 2916 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.059283 87.696 By MS/MS 1 0 1 1 121060 121060 0 1160 1954 1199 3030 2156 2156 1 5914.8 0 ALVDHENVISCPHLGASTK GAALDVFTEEPPRDRALVDHENVISCPHLG HENVISCPHLGASTKEAQSRCGEEIAVQFV R A L T K E 2 0 1 1 1 0 1 1 2 1 2 1 0 0 1 2 1 0 0 2 0 0 19 0 2047.0157 O43175 O43175 271 289 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3;4 4.8059E-12 199.33 By MS/MS 6.86 0.833 3 2 2 7 92767000 92767000 0 1161 185 1200 3031;3032;3033;3034;3035;3036;3037 2157;2158;2159;2160 2159 4 820060 0 ALVEFTNSPDCLSK LYETTDTTTRLQAEKALVEFTNSPDCLSKC KALVEFTNSPDCLSKCQLLLERGSSSYSQL K A L S K C 1 0 1 1 1 0 1 0 0 0 2 1 0 1 1 2 1 0 0 1 0 0 14 0 1579.7552 Q9UIA9 Q9UIA9 33 46 XPO7 Exportin-7 yes yes 2 6.8253E-12 195.77 By MS/MS 4 0 1 1 2181000 2181000 0 1162 2790 1201 3038 2161 2161 1 59539 0 ALVELLR AYLRRIKMELQQKDRALVELLREKVGLFAE MELQQKDRALVELLREKVGLFAEMTHFQAE R A L L R E 1 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 812.51199 Q92974 Q92974 603 609 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.036285 110.61 By MS/MS 4 0 1 1 839470 839470 0 1163 2094 1202 3039 2162 2162 1 22917 0 ALVEVLGPYEPLLSR SGSWERDQQVEAAQRALVEVLGPYEPLLSR ALVEVLGPYEPLLSRVQAALVWERPARSAL R A L S R V 1 1 0 0 0 0 2 1 0 0 4 0 0 0 2 1 0 0 1 2 0 0 15 0 1654.9294 Q86VR2 Q86VR2 41 55 FAM134C Protein FAM134C yes yes 2 0.00022585 132.5 By MS/MS 6 0 1 1 2014800 2014800 0 1164 1830 1203 3040 2163 2163 1 15711 0 ALVFDSTFDQYR ERIPPPKVHRKNPLRALVFDSTFDQYRGVI PLRALVFDSTFDQYRGVIANVALFDGVVSK R A L Y R G 1 1 0 2 0 1 0 0 0 0 1 0 0 2 0 1 1 0 1 1 0 0 12 0 1460.6936 Q8N442 Q8N442 256 267 GUF1 Translation factor GUF1, mitochondrial yes yes 2 6.1976E-11 201.61 By MS/MS 5 0 1 1 1126400 1126400 0 1165 1913 1204 3041 2164 2164 1 46298 0 ALVFQPVAELK ANTPDSGCVLGMRKRALVFQPVAELKDQTD MRKRALVFQPVAELKDQTDFEHRIPKEQWW R A L L K D 2 0 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 2 0 0 11 0 1213.7071 P08237 P08237 717 727 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 0.018507 102.52 By MS/MS 5 0 1 1 1008300 1008300 0 1166 500 1205 3042 2165 2165 1 41445 0 ALVGDFMNR YLNYKVCLAEVYQDKALVGDFMNRRGDYDD EVYQDKALVGDFMNRRGDYDDPKVCANEFK K A L N R R 1 1 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 9 0 1021.5015 Q12789 Q12789 1345 1353 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.055262 75.213 By MS/MS 2 0 1 1 311290 311290 0 1167 1306 1206 3043 2166 2166 1 15473 0 ALVGLCK KDLYKCSEKDSIRIRALVGLCKLGSAGGTD EKDSIRIRALVGLCKLGSAGGTDFSMKQFA R A L C K L 1 0 0 0 1 0 0 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 7 0 759.4313 Q9H3U1 Q9H3U1 498 504 UNC45A Protein unc-45 homolog A yes yes 2 0.043799 105.42 By MS/MS 4.5 0.5 1 1 2 1632700 1632700 0 1168 2493 1207 3044;3045 2167 2167 1 46860 0 ALVGLVNDESPEIQAQCNK KCSQSLVECAGPLLKALVGLVNDESPEIQA LVNDESPEIQAQCNKVLRHFADQKVVVGNK K A L N K V 2 0 2 1 1 2 2 1 0 1 2 1 0 0 1 1 0 0 0 2 0 0 19 0 2084.0208 O43156 O43156 335 353 TTI1 TELO2-interacting protein 1 homolog yes yes 2 2.2152E-44 262.48 By MS/MS 4 0 1 1 1016800 1016800 0 1169 183 1208 3046 2168 2168 1 27759 0 ALVLAQIR VLQMPRGNLEVVHHRALVLAQIRKWLDKLM LEVVHHRALVLAQIRKWLDKLMFKEAFECM R A L I R K 2 1 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 8 0 882.56509 O95163 O95163 723 730 IKBKAP Elongator complex protein 1 yes yes 2 0.0047404 138.07 By MS/MS 3 1.41 1 1 1 1 1 5 867140 867140 0 1170 368 1209 3047;3048;3049;3050;3051 2169;2170 2170 2 30467 0 ALVMLLEVR LAGDEEPEVRKNVCRALVMLLEVRMDRLLP RKNVCRALVMLLEVRMDRLLPHMHNIVEYM R A L V R M 1 1 0 0 0 0 1 0 0 0 3 0 1 0 0 0 0 0 0 2 0 0 9 0 1042.6209 Q92973;O14787 Q92973 246 254 TNPO1;TNPO2 Transportin-1;Transportin-2 yes no 2 0.0031059 116.73 By MS/MS 4.5 0.5 1 1 2 1019200 1019200 0 1171 2093 1210 3052;3053 2171;2172 2172 1365 2 30664 0 ALVNQLHER DLGSALYQENYKQMKALVNQLHERVEHIKL NYKQMKALVNQLHERVEHIKLGGGEKARAL K A L E R V 1 1 1 0 0 1 1 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1078.5883 Q9HCC0 Q9HCC0 51 59 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.00051237 153.08 By MS/MS 6 0 1 1 4178200 4178200 0 1172 2559 1211 3054 2173 2173 1 32582 0 ALVPFEDLFGQAPGGER SLVPSPPEPRQRPTKALVPFEDLFGQAPGG VPFEDLFGQAPGGERDKASFLQTVQKFAEH K A L E R D 2 1 0 1 0 1 2 3 0 0 2 0 0 2 2 0 0 0 0 1 0 0 17 0 1801.8999 Q9BQ95 Q9BQ95 68 84 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes yes 2 0.0010385 118.51 By MS/MS 6 0.816 1 1 1 3 1376200 1376200 0 1173 2308 1212 3055;3056;3057 2174;2175;2176 2174 3 13500 0 ALVRESEGFEEHVPSDNS EDSQRYKEGRVILERALVRESEGFEEHVPS RESEGFEEHVPSDNS_______________ R A L N S - 1 1 1 1 0 0 4 1 1 0 1 0 0 1 1 3 0 0 0 2 0 0 18 1 2000.9076 P62699 P62699 104 121 YPEL5 Protein yippee-like 5 yes yes 3 0.0056486 80.545 By MS/MS 10 0 1 1 406390 406390 0 1174 1139 1213 3058 2177 2177 1 431950 0 ALVSGKPAESSAVAATEK RRESVPPSIIMSSQKALVSGKPAESSAVAA SGKPAESSAVAATEKKAVTPAPPIKRWELS K A L E K K 5 0 0 0 0 0 2 1 0 0 1 2 0 0 1 3 1 0 0 2 0 0 18 1 1714.9101 O95182 O95182 75 92 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 3 0.0080855 88.565 By MS/MS 10 0 1 1 441750 441750 0 1175 372 1214 3059 2178 2178 1 469540 0 ALWADSGIQNAYDR MVETRVFLQYLPAIRALWADSGIQNAYDRR RALWADSGIQNAYDRRREFQLGESVKYFLD R A L D R R 3 1 1 2 0 1 0 1 0 1 1 0 0 0 0 1 0 1 1 0 0 0 14 0 1578.7427 Q14344 Q14344 151 164 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes yes 2 0.00081554 126.95 By MS/MS 7 0 1 1 920800 920800 0 1176 1430 1215 3060 2179 2179 1 16455 0 ALYEHLTAK LMKSYVSEKDVTSAKALYEHLTAKNTKLDD DVTSAKALYEHLTAKNTKLDDLFLKRYASL K A L A K N 2 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 9 0 1044.5604 P42704 P42704 1339 1347 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.030024 91.069 By MS/MS 3 0 1 1 37405000 37405000 0 1177 854 1216 3061 2180 2180 1 976460 0 ALYEQNQSDVNEAK AFNEDGLRQVLEEMKALYEQNQSDVNEAKS KALYEQNQSDVNEAKSGGRSDLIPTIKFRH K A L A K S 2 0 2 1 0 2 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 14 0 1607.7427 Q14691 Q14691 38 51 GINS1 DNA replication complex GINS protein PSF1 yes yes 2 1.0096E-87 337.99 By MS/MS 9 0 1 1 556960 556960 0 1178 1441 1217 3062 2181 2181 1 319640 0 ALYPVIPR GLNRRELGHGALAEKALYPVIPRDFPFTIR HGALAEKALYPVIPRDFPFTIRVTSEVLES K A L P R D 1 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 1 1 0 0 8 0 927.55419 Q8TCS8 Q8TCS8 457 464 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.034077 97.596 By MS/MS 5.5 0.5 1 1 2 2711400 2711400 0 1179 1996 1218 3063;3064 2182 2182 1 85858 0 ALYSGIAPAMLR MLHALVRIGREEGLKALYSGIAPAMLRQAS GLKALYSGIAPAMLRQASYGTIKIGTYQSL K A L L R Q 3 1 0 0 0 0 0 1 0 1 2 0 1 0 1 1 0 0 1 0 0 0 12 0 1261.6853 Q5SVS4 Q5SVS4 67 78 SLC25A30 Kidney mitochondrial carrier protein 1 yes yes 2 0.00138 121.73 By MS/MS 8 0 1 1 1386400 1386400 0 1180 1620 1219 3065 2183 2183 1197 1 91462 0 ALYTFEPR PPPKPVKPGQVKVFRALYTFEPRTPDELYF GQVKVFRALYTFEPRTPDELYFEEGDIIYI R A L P R T 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 8 0 995.50763 Q92882 Q92882 19 26 OSTF1 Osteoclast-stimulating factor 1 yes yes 2 0.0079015 126.28 By MS/MS 8 0 1 1 860490 860490 0 1181 2084 1220 3066 2184 2184 1 56766 0 ALYTLSGETEELSR NHFLILFRDSSCQFRALYTLSGETEELSRL RALYTLSGETEELSRLAGYGPRTVTPAMVE R A L S R L 1 1 0 0 0 0 3 1 0 0 3 0 0 0 0 2 2 0 1 0 0 0 14 0 1567.773 Q9P1Y5 Q9P1Y5 1171 1184 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 1.2774E-25 238.92 By MS/MS By matching 3 0 2 1 1 1335800 1304500 31238 1182 2733 1221 3067;3068 2185 2185 1 34055 44770 ALYTLVNK HTWIRQCLKYDAQDKALYTLVNKVQYGIFP KYDAQDKALYTLVNKVQYGIFPDNFTFNLL K A L N K V 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 0 1 0 1 1 0 0 8 0 920.53312 Q92552 Q92552 125 132 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0013764 166.78 By MS/MS 6.5 1.12 1 1 1 1 4 16721000 16721000 0 1183 2059 1222 3069;3070;3071;3072 2186 2186 1 343500 0 AMAVLESLR LEACVRDVLNDTAPRAMAVLESLRVIITNF NDTAPRAMAVLESLRVIITNFPAAKSLDIQ R A M L R V 2 1 0 0 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 9 0 988.53755 P47897 P47897 568 576 QARS Glutamine--tRNA ligase yes yes 2 0.0055608 126.41 By MS/MS 5 0 1 1 691780 691780 0 1184 896 1223 3073 2187 2187 1 28435 0 AMDPQDLQNTEVPIATTAK ELLARLPPTLCTWLKAMDPQDLQNTEVPIA QDLQNTEVPIATTAKLVNKVIELLPEKHGQ K A M A K L 3 0 1 2 0 2 1 0 0 1 1 1 1 0 2 0 3 0 0 1 0 0 19 0 2041.999 Q9H2M9 Q9H2M9 1341 1359 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 2.7431E-44 255.72 By MS/MS 3 0 1 1 1100200 1100200 0 1185 2481 1224 3074 2188 2188 1511 1 28722 0 AMDQEITVNPQFVQK DQEMLKCIELDERLKAMDQEITVNPQFVQK AMDQEITVNPQFVQKSMGSQEDDSGNKPSS K A M Q K S 1 0 1 1 0 3 1 0 0 1 0 1 1 1 1 0 1 0 0 2 0 0 15 0 1746.8611 Q9UNS2 Q9UNS2 392 406 COPS3 COP9 signalosome complex subunit 3 yes yes 2 1.4454E-38 262.15 By MS/MS 7 0 1 1 2394200 2394200 0 1186 2847 1225 3075 2189 2189 1637 1 42785 0 AMDQVNALCEQLVK ______________________________ MAMDQVNALCEQLVKAVTVMMDPNSTQRYR M A M V K A 2 0 1 1 1 2 1 0 0 0 2 1 1 0 0 0 0 0 0 2 0 0 14 0 1617.7855 Q9HAV4 Q9HAV4 2 15 XPO5 Exportin-5 yes yes 2 1.3367E-06 172.99 By MS/MS 3 0 1 1 1528700 1528700 0 1187 2546 1226 3076 2190 2190 1536 1 39908 0 AMEGIFIKPSVEPSAGHDEL EVHGMPSANTHNTWKAMEGIFIKPSVEPSA FIKPSVEPSAGHDEL_______________ K A M E L - 2 0 0 1 0 0 3 2 1 2 1 1 1 1 2 2 0 0 0 1 0 0 20 1 2126.0354 Q9HCN8 Q9HCN8 202 221 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 3 0.0033975 77.221 By MS/MS 9.5 0.5 1 1 2 4961300 4961300 0 1188 2563 1227 3077;3078 2191;2192 2191 1542 2 2888600 0 AMFEQMR ______________________________ ______________________________ M A M M R A 1 1 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 7 0 911.39934 Q9UBQ5 Q9UBQ5 2 8 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.0082972 120.49 By MS/MS 9 0 2 2 630190 630190 0 1189 2755 1228;1229 3079;3080 2193;2194 2194 1606;1607 2 361670 0 AMFEQMRANVGK ______________________________ ______________________________ M A M G K L 2 1 1 0 0 1 1 1 0 0 0 1 2 1 0 0 0 0 0 1 0 0 12 1 1380.6642 Q9UBQ5 Q9UBQ5 2 13 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.00033858 123.79 By MS/MS 9 0 1 1 428390 428390 0 1190 2755 1230 3081 2195 2195 1606;1607 1 245860 0 AMGAAQVVVTDLSATR CGAGPIGMVTLLVAKAMGAAQVVVTDLSAT MGAAQVVVTDLSATRLSKAKEIGADLVLQI K A M T R L 4 1 0 1 0 1 0 1 0 0 1 0 1 0 0 1 2 0 0 3 0 0 16 0 1588.8243 Q00796 Q00796 194 209 SORD Sorbitol dehydrogenase yes yes 2 6.5301E-07 157.2 By MS/MS 7 0 1 1 386240 386240 0 1191 1237 1231 3082 2196 2196 1 6902.2 0 AMGIMNSFVNDIFER KVLKQVHPDTGISSKAMGIMNSFVNDIFER AMGIMNSFVNDIFERIASEASRLAHYNKRS K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899 Q99880 59 73 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J yes no 2 2.1354E-06 149.41 By MS/MS 10 0 1 1 607160 607160 0 1192 267 1232 3083 2197;2198 2197 151;152 2 645350 0 AMGPLVLTEVLFNEK SDKEIVAEAERLDVKAMGPLVLTEVLFNEK AMGPLVLTEVLFNEKIREQIKKYRRHFLRF K A M E K I 1 0 1 0 0 0 2 1 0 0 3 1 1 1 1 0 1 0 0 2 0 0 15 0 1659.8906 P55010 P55010 274 288 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 1.9052E-07 167.71 By MS/MS 6 0 2 2 1577600 1577600 0 1193 1021 1233;1234 3084;3085 2199;2200;2201 2199 794 3 12302 0 AMGTLLNTAISEVIGK GIVWQDVLPVNIYCKAMGTLLNTAISEVIG MGTLLNTAISEVIGKITALEDISTEDGDRL K A M G K I 2 0 1 0 0 0 1 2 0 2 2 1 1 0 0 1 2 0 0 1 0 0 16 0 1616.8807 O43264 O43264 652 667 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 1.0531E-14 199.12 By MS/MS 4 0 1 1 388520 388520 0 1194 189 1235 3086 2202;2203 2203 112 2 10606 0 AMGVVVATGVNTEIGK KKNMLFSGTNIAAGKAMGVVVATGVNTEIG MGVVVATGVNTEIGKIRDEMVATEQERTPL K A M G K I 2 0 1 0 0 0 1 3 0 1 0 1 1 0 0 0 2 0 0 4 0 0 16 0 1544.8232 P16615 P16615 219 234 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 6.9954E-21 216.83 By MS/MS 3 0.816 1 1 1 3 1196100 1196100 0 1195 608 1236 3087;3088;3089 2204;2205 2204 392 2 38697 0 AMIEVEDFVDPNGK MEAMLQLFRAQLLPKAMIEVEDFVDPNGKI KAMIEVEDFVDPNGKISLQREETPSNRGES K A M G K I 1 0 1 2 0 0 2 1 0 1 0 1 1 1 1 0 0 0 0 2 0 0 14 0 1562.7287 Q92538 Q92538 1046 1059 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 2.5862E-05 156.01 By MS/MS 2.5 0.5 2 2 4 730070 730070 0 1196 2055 1237;1238 3090;3091;3092;3093 2206;2207 2206 1332 2 30605 0 AMIIAER PEDSLASVPYPPLLRAMIIAERQKNGDTST VPYPPLLRAMIIAERQKNGDTSTEEPMLNV R A M E R Q 2 1 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 7 0 802.43711 P82930 P82930 172 178 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.049192 101.69 By MS/MS 8 0 1 1 2071500 2071500 0 1197 1209 1239 3094 2208 2208 1 136660 0 AMKPWIQPK FALPQYLKTVYQHQKAMKPWIQPKTKVIPY VYQHQKAMKPWIQPKTKVIPYVRYL_____ K A M P K T 1 0 0 0 0 1 0 0 0 1 0 2 1 0 2 0 0 1 0 0 0 0 9 1 1097.6056 CON__P02663 CON__P02663 189 197 yes yes 3 0.031288 77.318 By MS/MS 5.5 0.5 1 1 2 2363000 2363000 0 + 1198 38 1240 3095;3096 2209 2209 21 1 84897 0 AMLGQFSQAEALLMK ALAEHLSELYPKQIRAMLGQFSQAEALLMK AMLGQFSQAEALLMKAGVQPGTFDGVLMDL R A M M K A 3 0 0 0 0 2 1 1 0 0 3 1 2 1 0 1 0 0 0 0 0 0 15 0 1636.8317 A6NJ78;P0C7V9 A6NJ78 141 155 METTL15;METTL15P1 Probable methyltransferase-like protein 15;Putative methyltransferase-like protein 15P1 yes no 2 3.5212E-11 193.28 By MS/MS 7 0 1 1 844460 844460 0 1199 24 1241 3097 2210 2210 9;10 1 15091 0 AMNIVVPFMFK RARVAISLGFLGGAKAMNIVVPFMFKYAVD GGAKAMNIVVPFMFKYAVDSLNQMSGNMLN K A M F K Y 1 0 1 0 0 0 0 0 0 1 0 1 2 2 1 0 0 0 0 2 0 0 11 0 1295.677 O75027 O75027 152 162 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.0023946 98.392 By MS/MS 1 0 1 1 115430 115430 0 1200 276 1242 3098 2211 2211 154;155 1 5639.7 0 AMNQQTTLDTPQLER KHVAYVFQALIYWIKAMNQQTTLDTPQLER AMNQQTTLDTPQLERKRTRELLELGIDNED K A M E R K 1 1 1 1 0 3 1 0 0 0 2 0 1 0 1 0 3 0 0 0 0 0 15 0 1744.8414 O95071 O95071 1960 1974 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 1.4838E-20 258.78 By MS/MS 1.8 0.748 2 2 1 5 1645800 1645800 0 1201 364 1243;1244 3099;3100;3101;3102;3103 2212;2213;2214;2215;2216 2213 193 5 75702 0 AMNVLTEAEER LQEMKEKLGRNVNMRAMNVLTEAEERYNDL VNMRAMNVLTEAEERYNDLMKKKRIVENDK R A M E R Y 2 1 1 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 11 0 1261.5973 O95347 O95347 987 997 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 2.0159E-06 175.65 By MS/MS 3 0 1 1 0 0 0 1202 385 1245 3104 2217 2217 1 0 0 AMQAAKR ______________________________ ______________________________ M A M K R A 3 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 7 1 774.41704 Q9Y3B4 Q9Y3B4 2 8 SF3B6 Splicing factor 3B subunit 6 yes yes 2 0.0492 64.776 By MS/MS 10 0 1 1 87116 87116 0 1203 2925 1246 3105 2218 2218 0 92595 0 AMQDAEVSK IVTDLIRRTIAPCQKAMQDAEVSKSDIGEV IAPCQKAMQDAEVSKSDIGEVILVGGMTRM K A M S K S 2 0 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 9 0 977.4488 P38646 P38646 369 377 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.012228 128.27 By MS/MS 5 0 1 1 0 0 0 1204 820 1247 3106 2219 2219 563 1 0 0 AMQDAEVSKSDIGEVILVGGMTR IVTDLIRRTIAPCQKAMQDAEVSKSDIGEV KSDIGEVILVGGMTRMPKVQQTVQDLFGRA K A M T R M 2 1 0 2 0 1 2 3 0 2 1 1 2 0 0 2 1 0 0 3 0 0 23 1 2405.193 P38646 P38646 369 391 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.00081313 75.956 By MS/MS 5 0 1 1 3105300 3105300 0 1205 820 1248 3107 2220 2220 563;564 1 127640 0 AMQDALADLPEWYGIK KYLRQWFIKTTAYAKAMQDALADLPEWYGI MQDALADLPEWYGIKGMQAHWIGDCVGCHL K A M I K G 3 0 0 2 0 1 1 1 0 1 2 1 1 0 1 0 0 1 1 0 0 0 16 0 1819.8815 Q15031 Q15031 251 266 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 9.6563E-22 230.96 By MS/MS 4.33 0.471 2 1 3 843510 843510 0 1206 1467 1249;1250 3108;3109;3110 2221;2222 2221 1148 2 23405 0 AMTEDGFLAVCSEAK VFLGRDTYGVRPLFKAMTEDGFLAVCSEAK AMTEDGFLAVCSEAKGLVTLKHSATPFLKV K A M A K G 3 0 0 1 1 0 2 1 0 0 1 1 1 1 0 1 1 0 0 1 0 0 15 0 1627.7222 P08243 P08243 148 162 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.0021578 114.72 By MS/MS 6 0 1 1 1848100 1848100 0 1207 503 1251 3111 2223 2223 1 14411 0 AMTGVEQWPYR ASEMAVAHALTEKSKAMTGVEQWPYRAVAQ EKSKAMTGVEQWPYRAVAQALEVIPRTLIQ K A M Y R A 1 1 0 0 0 1 1 1 0 0 0 0 1 0 1 0 1 1 1 1 0 0 11 0 1336.6234 P49368 P49368 428 438 CCT3 T-complex protein 1 subunit gamma yes yes 2 3.8813E-07 185.6 By MS/MS By matching 6.44 2.45 1 1 3 1 1 1 1 8 1 63875000 63794000 80829 1208 916 1252;1253 3112;3113;3114;3115;3116;3117;3118;3119;3120 2224;2225;2226;2227;2228;2229;2230;2231 2227 667 6 1669100 247900 AMVDPAQTVEQR ETVRSCTTESCDFVRAMVDPAQTVEQRLKL FVRAMVDPAQTVEQRLKLFKLASEKHQHMY R A M Q R L 2 1 0 1 0 2 1 0 0 0 0 0 1 0 1 0 1 0 0 2 0 0 12 0 1343.6503 P50416 P50416 618 629 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 2 0.010748 90.653 By MS/MS 1 0 1 1 50584 50584 0 1209 946 1254 3121 2232;2233 2232 701 2 2471.4 0 AMVEAVQLIADGK VDALYNRFLFPEGIKAMVEAVQLIADGKAP IKAMVEAVQLIADGKAPRIPQPEEGATYEG K A M G K A 3 0 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 0 2 0 0 13 0 1343.7119 Q3SY69 Q3SY69 197 209 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 3.0748E-13 214.04 By MS/MS 4.5 0.5 1 1 2 669860 669860 0 1210 1570 1255 3122;3123 2234 2234 1 19742 0 AMVEYEIDLQK QDLIKMIFDVESMKKAMVEYEIDLQKMPLG SMKKAMVEYEIDLQKMPLGKLSKRQIQAAY K A M Q K M 1 0 0 1 0 1 2 0 0 1 1 1 1 0 0 0 0 0 1 1 0 0 11 0 1337.6537 P09874 P09874 685 695 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 8.6769E-11 204.79 By MS/MS 4 0 2 2 734950 734950 0 1211 521 1256;1257 3124;3125 2235;2236 2235 312 2 20063 0 AMYLPDTLSPADQLK HLHQEIPTSLLILSRAMYLPDTLSPADQLK AMYLPDTLSPADQLKSTLQTLPEIVAKEAQ R A M L K S 2 0 0 2 0 1 0 0 0 0 3 1 1 0 2 1 1 0 1 0 0 0 15 0 1661.8335 O95202 O95202 420 434 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 2.9472E-07 167.18 By MS/MS 4.67 0.471 1 2 3 2303100 2303100 0 1212 374 1258;1259 3126;3127;3128 2237;2238 2238 200 2 92647 0 ANACNSVIK NVFDTELKGLSKIERANACNSVIKQLMKKE LSKIERANACNSVIKQLMKKEFTLEFSRDR R A N I K Q 2 0 2 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 9 0 975.48076 P16615 P16615 468 476 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.00055526 152.11 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 12338000 12338000 0 1213 608 1260 3129;3130;3131;3132;3133;3134 2239;2240;2241;2242;2243 2242 5 449270 0 ANAEFNLR RHRKLISINKRYTGKANAEFNLRHDWNSLL NKRYTGKANAEFNLRHDWNSLLSHDPRLLF K A N L R H 2 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 933.46683 Q8IWF2 Q8IWF2 89 96 FOXRED2 FAD-dependent oxidoreductase domain-containing protein 2 yes yes 2 0.002122 156.51 By MS/MS 4.5 0.5 1 1 2 1568300 1568300 0 1214 1865 1261 3135;3136 2244 2244 1 55423 0 ANALLIR AMETLKILYKYEQNKANALLIREVDVEKVT LYKYEQNKANALLIREVDVEKVTTFEHQYV K A N I R E 2 1 1 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 769.48102 P29992 P29992 108 114 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 2 0.0093801 155.73 By MS/MS 6.5 0.5 1 1 2 2584600 2584600 0 1215 727 1262 3137;3138 2245 2245 1 36158 0 ANAPCVIFIDELDSVGGK GVGASRIRNLFREAKANAPCVIFIDELDSV PCVIFIDELDSVGGKRIESPMHPYSRQTIN K A N G K R 2 0 1 2 1 0 1 2 0 2 1 1 0 1 1 1 0 0 0 2 0 0 18 0 1903.935 Q96TA2 Q96TA2 429 446 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2;3 0.00014853 145.1 By MS/MS 6 0 2 2 4290000 4290000 0 1216 2263 1263 3139;3140 2246;2247;2248 2246 3 33454 0 ANAVAQQKK A N K K 3 0 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 9 1 956.54033 REV__Q9NUL3 yes yes 2 0.0043606 139.28 By MS/MS By matching 10 0 3 2 1 1072400 1053900 18493 + 1217 3046 1264 3141;3142;3143 2249 2249 1 1120200 474340 ANDDIIVNWVNR RYTLNVLEDLGDGQKANDDIIVNWVNRTLS GQKANDDIIVNWVNRTLSEAGKSTSIQSFK K A N N R T 1 1 3 2 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 2 0 0 12 0 1427.7157 P13797 P13797 519 530 PLS3 Plastin-3 yes yes 2 4.5588E-07 209.97 By MS/MS 5 0 1 1 515600 515600 0 1218 580 1265 3144 2250 2250 1 21193 0 ANEFLEVGK ______________________________ ENALKRANEFLEVGKKQPALDVLYDVMKSK R A N G K K 1 0 1 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1005.5131 Q14152 Q14152 15 23 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 4.7639E-06 178.55 By MS/MS By matching 3.33 0.471 2 1 2 1 12896000 12816000 79750 1219 1409 1266 3145;3146;3147 2251 2251 1 336070 114300 ANEFLEVGKK ______________________________ NALKRANEFLEVGKKQPALDVLYDVMKSKK R A N K K Q 1 0 1 0 0 0 2 1 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1133.6081 Q14152 Q14152 15 24 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00024973 169.65 By MS/MS By matching 3.4 0.49 3 2 4 1 15966000 15890000 76234 1220 1409 1267 3148;3149;3150;3151;3152 2252;2253 2253 2 415950 109260 ANELLQR ICPLLYSTDDAICSKANELLQRSRQVQNKT TDDAICSKANELLQRSRQVQNKTEKERMLR K A N Q R S 1 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 842.46102 O75694 O75694 877 883 NUP155 Nuclear pore complex protein Nup155 yes yes 2 0.020411 125.25 By MS/MS 2.5 1.12 1 1 1 1 4 1244200 1244200 0 1221 324 1268 3153;3154;3155;3156 2254 2254 1 34349 0 ANELPQPPVPEPANAGK TIEDDDYSPPSKRPKANELPQPPVPEPANA ELPQPPVPEPANAGKRKVREFNFEKWNARI K A N G K R 3 0 2 0 0 1 2 1 0 0 1 1 0 0 5 0 0 0 0 1 0 0 17 0 1727.8842 P78347 P78347 327 343 GTF2I General transcription factor II-I yes yes 2 1.4324E-11 175.88 By MS/MS 3.5 0.5 1 1 2 2497200 2497200 0 1222 1194 1269 3157;3158 2255 2255 1 65441 0 ANEQEPCGWWLAR NKEITEGDEVEVYSRANEQEPCGWWLARVR SRANEQEPCGWWLARVRMMKGDFYVIEYAA R A N A R V 2 1 1 0 1 1 2 1 0 0 1 0 0 0 1 0 0 2 0 0 0 0 13 0 1615.7202 P51116 P51116 81 93 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 5.1032E-05 158.08 By MS/MS 4 0 1 1 236700 236700 0 1223 958 1270 3159 2256 2256 1 6461.7 0 ANEVEQMIR ELQKLEDDAKDNQQKANEVEQMIRDLEASI KDNQQKANEVEQMIRDLEASIARYKEEYAV K A N I R D 1 1 1 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 9 0 1088.5284 Q14204 Q14204 3430 3438 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.014186 143.03 By MS/MS 1 0 1 1 0 0 0 1224 1421 1271 3160 2257 2257 1097 1 0 0 ANEVISK FEAIPRALAENSGVKANEVISKLYAVHQEG LAENSGVKANEVISKLYAVHQEGNKNVGLD K A N S K L 1 0 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 7 0 759.41267 P50990 P50990 460 466 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00076048 195.81 By MS/MS By matching 5.38 2.91 1 1 1 2 1 1 1 7 1 66365000 66318000 47503 1225 955 1272 3161;3162;3163;3164;3165;3166;3167;3168 2258;2259;2260 2259 3 695590 145690 ANGHLLLNSEK AMWPEQSDKWPTAVRANGHLLLNSEKMSKS TAVRANGHLLLNSEKMSKSTGNFLTLTQAI R A N E K M 1 0 2 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1194.6357 Q9P2J5 Q9P2J5 706 716 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2;3 0.00051597 152.54 By MS/MS 3.5 0.5 2 2 4 1379000 1379000 0 1226 2738 1273 3169;3170;3171;3172 2261;2262 2261 2 36263 0 ANHFFTVTDPR NIKEPRWDQSTFIGRANHFFTVTDPRNILL FIGRANHFFTVTDPRNILLTNEQLESARKI R A N P R N 1 1 1 1 0 0 0 0 1 0 0 0 0 2 1 0 2 0 0 1 0 0 11 0 1303.6309 Q9H9B4 Q9H9B4 25 35 SFXN1 Sideroflexin-1 yes yes 2;3 0.00050946 142.36 By MS/MS By matching 8.38 0.857 1 4 2 1 7 1 94170000 94088000 81484 1227 2533 1274 3173;3174;3175;3176;3177;3178;3179;3180 2263;2264;2265 2263 3 6638000 695160 ANILEDVSLDELK TLKKSLLQAWGLILRANILEDVSLDELKNF LRANILEDVSLDELKNFVHAQCLELKAKGL R A N L K N 1 0 1 2 0 0 2 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 13 0 1457.7613 Q9NU22 Q9NU22 2871 2883 MDN1 Midasin yes yes 2 0.015033 88.596 By MS/MS 1 0 1 1 42070 42070 0 1228 2635 1275 3181 2266 2266 1 2055.5 0 ANILGLAAGQR RVEGITGKQMESFLKANILGLAAGQRCGAS SFLKANILGLAAGQRCGAS___________ K A N Q R C 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1082.6196 Q14807 Q14807 651 661 KIF22 Kinesin-like protein KIF22 yes yes 2 0.03337 93.598 By MS/MS 5 0 1 1 230390 230390 0 1229 1448 1276 3182 2267 2267 0 9469.9 0 ANINVENAFFTLAR LALDYGIKFMETSAKANINVENAFFTLARD KANINVENAFFTLARDIKAKMDKKLEGNSP K A N A R D 3 1 3 0 0 0 1 0 0 1 1 0 0 2 0 0 1 0 0 1 0 0 14 0 1578.8154 P61006 P61006 154 167 RAB8A Ras-related protein Rab-8A yes yes 2 0.0047177 120.77 By MS/MS 9 0 1 1 53715 53715 0 1230 1080 1277 3183 2268;2269 2268 2 30827 0 ANIRLPPEVNR ______________________________ AAKRANIRLPPEVNRILYIRNLPYKITAEE R A N N R I 1 2 2 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 11 1 1277.7204 Q9Y3B4 Q9Y3B4 9 19 SF3B6 Splicing factor 3B subunit 6 yes yes 3 0.035607 83.045 By MS/MS 10 0 1 1 158240 158240 0 1231 2925 1278 3184 2270 2270 1 168200 0 ANITAIR TEKGISDLAQHYLMRANITAIRRVRKTDNN LAQHYLMRANITAIRRVRKTDNNRIARACG R A N I R R 2 1 1 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 7 0 757.44464 P49368 P49368 307 313 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.020207 125.81 By MS/MS 6.5 1.12 1 1 1 1 4 98525000 98525000 0 1232 916 1279 3185;3186;3187;3188 2271;2272;2273 2271 3 1086200 0 ANITAIRR TEKGISDLAQHYLMRANITAIRRVRKTDNN AQHYLMRANITAIRRVRKTDNNRIARACGA R A N R R V 2 2 1 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 8 1 913.54575 P49368 P49368 307 314 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.034251 124.34 By MS/MS 5 0 1 1 1090400 1090400 0 1233 916 1280 3189 2274 2274 1 44819 0 ANLEKAQAELVGTADEATR EEAVTLDMLDLGAAKANLEKAQAELVGTAD KAQAELVGTADEATRAEIQIRIEANEALVK K A N T R A 5 1 1 1 0 1 3 1 0 0 2 1 0 0 0 0 2 0 0 1 0 0 19 1 1986.0018 P30049 P30049 132 150 ATP5D ATP synthase subunit delta, mitochondrial yes yes 3 0.0089045 74.744 By MS/MS 10 0 1 1 351570 351570 0 1234 732 1281 3190 2275 2275 1 373680 0 ANLIVLGAVPR VIDMKNAVIGNNKQKANLIVLGAVPRLLYL NKQKANLIVLGAVPRLLYLLQQETSSTELK K A N P R L 2 1 1 0 0 0 0 1 0 1 2 0 0 0 1 0 0 0 0 2 0 0 11 0 1121.6921 Q8IUR7 Q8IUR7 55 65 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 1.251E-10 200.54 By MS/MS 6 0.816 1 1 1 3 1666000 1666000 0 1235 1854 1282 3191;3192;3193 2276;2277 2276 2 39972 0 ANLLTTEEILTLAR CQYCMPEEGVPLTPKANLLTTEEILTLARL KANLLTTEEILTLARLFVKEGIDKIRLTGG K A N A R L 2 1 1 0 0 0 2 0 0 1 4 0 0 0 0 0 3 0 0 0 0 0 14 0 1556.8774 Q9NZB8 Q9NZB8 99 112 MOCS1 Molybdenum cofactor biosynthesis protein 1;Cyclic pyranopterin monophosphate synthase;Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 0.0017639 117.79 By MS/MS 7 0 1 1 54841 54841 0 1236 2710 1283 3194 2278 2278 1 980.01 0 ANLNLENLLEATK KRQLELESELQSLQKANLNLENLLEATKAC QKANLNLENLLEATKACKRQEVSQLNKIHA K A N T K A 2 0 3 0 0 0 2 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 13 0 1441.7777 Q9NS87 Q9NS87 626 638 KIF15 Kinesin-like protein KIF15 yes yes 2 1.545E-07 182.41 By MS/MS 3 0 1 1 138150 138150 0 1237 2622 1284 3195 2279 2279 1 3606.5 0 ANLPQSFQVDTSK KVKCSGPGLSPGMVRANLPQSFQVDTSKAG VRANLPQSFQVDTSKAGVAPLQVKVQGPKG R A N S K A 1 0 1 1 0 2 0 0 0 0 1 1 0 1 1 2 1 0 0 1 0 0 13 0 1433.7151 P21333 P21333 1465 1477 FLNA Filamin-A yes yes 2 1.874E-07 179.6 By MS/MS 3 0.816 1 1 1 3 5014400 5014400 0 1238 648 1285 3196;3197;3198 2280;2281 2281 2 201800 0 ANLQIDQINTDLNLER EEQGNTELINDRLKKANLQIDQINTDLNLE NLQIDQINTDLNLERSHAQKNENARQQLER K A N E R S 1 1 3 2 0 2 1 0 0 2 3 0 0 0 0 0 1 0 0 0 0 0 16 0 1868.9592 P35579 P35579 1755 1770 MYH9 Myosin-9 yes yes 2 4.2164E-50 277.31 By MS/MS 2 0 1 1 293130 293130 0 1239 793 1286 3199 2282 2282 1 14570 0 ANLVFKEIEK QIEAVPTSSASDGFKANLVFKEIEKKLEEE SDGFKANLVFKEIEKKLEEEGEQFVKKIGG K A N E K K 1 0 1 0 0 0 2 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1189.6707 P22307 P22307 433 442 SCP2 Non-specific lipid-transfer protein yes yes 3 0.0022805 107.45 By MS/MS 10 0 1 1 139460 139460 0 1240 657 1287 3200 2283 2283 1 148240 0 ANNDAVLKR ______________________________ ______________________________ M A N K R L 2 1 2 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 1 999.54614 Q12904 Q12904 2 10 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.00034735 169.09 By MS/MS 8 0.816 1 1 1 3 3678500 3678500 0 1241 1313 1288 3201;3202;3203 2284 2284 1 552560 0 ANNLHSGDNFQLNDSEIER VSSDSTHVTFYGLLRANNLHSGDNFQLNDS HSGDNFQLNDSEIERQHFKDQDMYSDKSDK R A N E R Q 1 1 4 2 0 1 2 1 1 1 2 0 0 1 0 2 0 0 0 0 0 0 19 0 2171.9832 Q9BZF1 Q9BZF1 300 318 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 3 5.8896E-11 138.77 By MS/MS 4 0 1 1 0 0 0 1242 2421 1289 3204 2285 2285 1 0 0 ANNLSSLSK EVLQRGEALSALDSKANNLSSLSKKYRQDA SALDSKANNLSSLSKKYRQDAKYLNMHSTY K A N S K K 1 0 2 0 0 0 0 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 9 0 932.49271 O75396 O75396 170 178 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0029142 120.27 By MS/MS 9 0.816 1 1 1 3 5959900 5959900 0 1243 304 1290 3205;3206;3207 2286;2287 2287 2 2892500 0 ANNMQEVSR KSPSNKDAALLEAARANNMQEVSRLLSEGA LLEAARANNMQEVSRLLSEGADVNAKHRLG R A N S R L 1 1 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 9 0 1047.4767 Q9H078 Q9H078 144 152 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.00064612 143.37 By MS/MS 6 0 1 1 959440 959440 0 1244 2448 1291 3208 2288 2288 1502 1 7481.7 0 ANNSTYGLAAAVFTK MQILKFKTIEEVVGRANNSTYGLAAAVFTK ANNSTYGLAAAVFTKDLDKANYLSQALQAG R A N T K D 4 0 2 0 0 0 0 1 0 0 1 1 0 1 0 1 2 0 1 1 0 0 15 0 1526.7729 P05091 P05091 437 451 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00041486 157.09 By MS/MS 9 0 1 1 432150 432150 0 1245 467 1292 3209 2289 2289 1 248010 0 ANNYNEAVYLVR EFVEAMIRQLKESLKANNYNEAVYLVRFLS SLKANNYNEAVYLVRFLSDLVNCHVIAAPS K A N V R F 2 1 3 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 2 0 0 12 0 1424.7048 Q09161 Q09161 118 129 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 2 0.013097 93.561 By MS/MS 5 0 1 1 692490 692490 0 1246 1297 1293 3210 2290 2290 1 28464 0 ANPALYVLR GSKPLIQQAMAKIMKANPALYVLRERIRKG MAKIMKANPALYVLRERIRKGLQLYSSEPT K A N L R E 2 1 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 9 0 1015.5815 Q6P2Q9 Q6P2Q9 1736 1744 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00042365 159.04 By MS/MS 2.5 1.12 1 1 1 1 4 1135000 1135000 0 1247 1706 1294 3211;3212;3213;3214 2291 2291 1 50574 0 ANPGAWILR VDTIVMANLGYFQLKANPGAWILRLRKGRS GYFQLKANPGAWILRLRKGRSEDIYRIYSH K A N L R L 2 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 9 0 996.5505 Q9NYU1;Q9NYU2 Q9NYU2 1158 1166 UGGT2;UGGT1 UDP-glucose:glycoprotein glucosyltransferase 2;UDP-glucose:glycoprotein glucosyltransferase 1 no no 2 2.477E-05 183.26 By MS/MS 3 0 1 1 788640 788640 0 1248 2699;2698 1295 3215 2292 2292 1 20588 0 ANPLSLDSAR NPANDLSDLLRAIPRANPLSLDSARWPLPP RAIPRANPLSLDSARWPLPPLPLSATGSNA R A N A R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1042.5407 O14654 O14654 985 994 IRS4 Insulin receptor substrate 4 yes yes 2 0.00060702 140.78 By MS/MS 2 0.816 1 1 1 3 1667500 1667500 0 1249 118 1296 3216;3217;3218 2293 2293 1 50342 0 ANQLAEEIESSAQYK LERDNSEEFLKREARANQLAEEIESSAQYK ANQLAEEIESSAQYKARVALENDDRSEEEK R A N Y K A 3 0 1 0 0 2 3 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 15 0 1679.8002 Q99700 Q99700 441 455 ATXN2 Ataxin-2 yes yes 2 6.559E-109 354.97 By MS/MS 3 0 1 1 1668800 1668800 0 1250 2283 1297 3219 2294 2294 1 43564 0 ANQYKENHNR GCEAVLLGIEQQVLRANQYKENHNRTQQQV QQVLRANQYKENHNRTQQQVEAEVTNIKKT R A N N R T 1 1 3 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 10 1 1272.5959 Q9H9Q2 Q9H9Q2 195 204 COPS7B COP9 signalosome complex subunit 7b yes yes 2 0.0036006 145.46 By MS/MS 8 0 1 1 119330 119330 0 1251 2537 1298 3220 2295 2295 1 7872 0 ANSEEFIPIFANNPR PSLEGRSDREAPGCRANSEEFIPIFANNPR ANSEEFIPIFANNPRELKAFLEHMSEVQPD R A N P R E 2 1 3 0 0 0 2 0 0 2 0 0 0 2 2 1 0 0 0 0 0 0 15 0 1717.8424 Q9H270 Q9H270 588 602 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 9.2786E-21 226.33 By MS/MS 4.5 0.5 1 1 2 894210 894210 0 1252 2473 1299 3221;3222 2296 2296 1 26900 0 ANSMGLFLQK ASEFEDPLVGEDTERANSMGLFLQKTNIIR EDTERANSMGLFLQKTNIIRDYLEDQQGGR R A N Q K T 1 0 1 0 0 1 0 1 0 0 2 1 1 1 0 1 0 0 0 0 0 0 10 0 1107.5747 P37268 P37268 204 213 FDFT1 Squalene synthase yes yes 2 8.2217E-11 205.12 By MS/MS 6 0.816 1 1 1 3 3238500 3238500 0 1253 814 1300 3223;3224;3225 2297 2297 559 1 50566 0 ANSNLVLQADR ______________________________ YEYKANSNLVLQADRSLIDRTRRDEPTGEV K A N D R S 2 1 2 1 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1199.6258 O75643 O75643 15 25 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.6209E-10 196.44 By MS/MS 2.5 1.12 1 1 1 1 4 1323500 1323500 0 1254 322 1301 3226;3227;3228;3229 2298;2299 2299 2 58269 0 ANSSVVSVNCK GPKGAQMLREFQWLRANSSVVSVNCKGKDS QWLRANSSVVSVNCKGKDSEKIEEWRSRAA R A N C K G 1 0 2 0 1 0 0 0 0 0 0 1 0 0 0 3 0 0 0 3 0 0 11 0 1163.5605 O60502 O60502 587 597 MGEA5 Protein O-GlcNAcase yes yes 2 6.5764E-16 215.83 By MS/MS 3.5 0.5 1 1 2 1206300 1206300 0 1255 251 1302 3230;3231 2300;2301 2300 2 32393 0 ANSTEYGLASGVFTR ISKFQNGDIDGVLQRANSTEYGLASGVFTR ANSTEYGLASGVFTRDINKAMYVSEKLEAG R A N T R D 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 2 2 0 1 1 0 0 15 0 1571.758 Q3SY69 Q3SY69 848 862 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 1.1038E-14 245.5 By MS/MS 4 0 1 1 3675500 3675500 0 1256 1570 1303 3232 2302 2302 1 100340 0 ANTFVAELK NPNKIFGVTTLDIVRANTFVAELKGLDPAR TLDIVRANTFVAELKGLDPARVNVPVIGGH R A N L K G 2 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 9 0 991.53385 P40926 P40926 177 185 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 5.5529E-08 200.56 By MS/MS 7.5 0.5 1 1 2 13955000 13955000 0 1257 832 1304 3233;3234 2303;2304 2303 2 901460 0 ANTTAFLTPLEIK PKPSVYLSTPSSASKANTTAFLTPLEIKAK SKANTTAFLTPLEIKAKVETDDVKKNSLDE K A N I K A 2 0 1 0 0 0 1 0 0 1 2 1 0 1 1 0 3 0 0 0 0 0 13 0 1417.7817 Q9Y5K6 Q9Y5K6 558 570 CD2AP CD2-associated protein yes yes 2 1.7239E-31 242.45 By MS/MS 5 0 1 1 0 0 0 1258 2972 1305 3235 2305 2305 1 0 0 ANTVLERVEGAQQR ARSMAAAAASLGGPRANTVLERVEGAQQRW RANTVLERVEGAQQRWKLQVQEQRKTVFDR R A N Q R W 2 2 1 0 0 2 2 1 0 0 1 0 0 0 0 0 1 0 0 2 0 0 14 1 1569.8223 Q9P0T7 Q9P0T7 150 163 TMEM9 Transmembrane protein 9 yes yes 3 0.0039477 96.734 By MS/MS 9 0 1 1 180750 180750 0 1259 2731 1306 3236 2306 2306 1 103730 0 ANVADTKLYDILGVPPGASENELKK ______________________________ ILGVPPGASENELKKAYRKLAKEYHPDKNP M A N K K A 3 0 2 2 0 0 2 2 0 1 3 3 0 0 2 1 1 0 1 2 0 0 25 2 2641.3963 O60884 O60884 2 26 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 3 0.011407 48.773 By MS/MS 6.5 0.5 1 1 2 1277800 1277800 0 1260 273 1307 3237;3238 2307 2307 1 10607 0 ANVAVVSGAPLQGQLVAR LSQYMGLSLNEEEIRANVAVVSGAPLQGQL AVVSGAPLQGQLVARPSSINYMVAPVTGND R A N A R P 4 1 1 0 0 2 0 2 0 0 2 0 0 0 1 1 0 0 0 4 0 0 18 0 1748.9897 O00560 O00560 68 85 SDCBP Syntenin-1 yes yes 2 4.2039E-25 217.2 By MS/MS 8 0 1 1 1122100 1122100 0 1261 103 1308 3239 2308 2308 1 74024 0 ANVELDHATLVR WSTKDFLQREHRSMRANVELDHATLVRFSP SMRANVELDHATLVRFSPDCRAFIVWLANG R A N V R F 2 1 1 1 0 0 1 0 1 0 2 0 0 0 0 0 1 0 0 2 0 0 12 0 1336.7099 Q9Y4P3 Q9Y4P3 132 143 TBL2 Transducin beta-like protein 2 yes yes 2 6.4499E-11 201.09 By MS/MS 7 0 1 1 3706500 3706500 0 1262 2957 1309 3240 2309 2309 1 66235 0 ANVVGNVWR GPHQARAAKLHGELRANVVGNVWRQYQATG LHGELRANVVGNVWRQYQATGFLWEQYSDR R A N W R Q 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 3 0 0 9 0 1013.5407 Q13724 Q13724 789 797 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 0.012935 111.82 By MS/MS 5 0 1 1 0 0 0 1263 1396 1310 3241 2310 2310 1 0 0 ANYAVDAYFR IAFTEWIEPPKRERKANYAVDAYFREALRV KRERKANYAVDAYFREALRVSEPKAPKAPR K A N F R E 3 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 1 0 0 10 0 1188.5564 O60264;P28370 O60264 740 749 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.00062274 140.16 By MS/MS 3 0 1 1 370400 370400 0 1264 240;720 1311 3242 2311 2311 1 9669.3 0 APAEEEVGPR LVSAVPMATPAPAARAPAEEEVGPRKGDFT APAARAPAEEEVGPRKGDFTRQEYERRAQL R A P P R K 2 1 0 0 0 0 3 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 10 0 1053.5091 Q9P1Y5 Q9P1Y5 964 973 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.032016 83.998 By MS/MS 3 0 1 1 73326 0 73326 1265 2733 1312 3243 2312 2312 1 0 105090 APAEILNGKEISAQIR ______________________________ PAEILNGKEISAQIRARLKNQVTQLKEQVP M A P I R A 3 1 1 0 0 1 2 1 0 3 1 1 0 0 1 1 0 0 0 0 0 0 16 1 1708.9472 P11586 P11586 2 17 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 3 0.00016189 127.18 By MS/MS 4 0 1 1 4277000 4277000 0 1266 556 1313 3244 2313 2313 1 116760 0 APAELEVECATQLR PGKKARKNAQPSPARAPAELEVECATQLRR RAPAELEVECATQLRRFGDKLNFRQKLLNL R A P L R R 3 1 0 0 1 1 3 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 14 0 1585.777 Q13794 Q13794 17 30 PMAIP1 Phorbol-12-myristate-13-acetate-induced protein 1 yes yes 2 8.4502E-08 178.95 By MS/MS 10 0 1 1 849880 849880 0 1267 1397 1314 3245 2314 2314 1 903330 0 APAFLYDIYLR SNHLLYHYWIAVSHKAPAFLYDIYLRMTGR VSHKAPAFLYDIYLRMTGRSPRMMKTITRL K A P L R M 2 1 0 1 0 0 0 0 0 1 2 0 0 1 1 0 0 0 2 0 0 0 11 0 1340.7129 Q8WVX9 Q8WVX9 359 369 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.00048789 143.03 By MS/MS 6 0 1 1 3304300 3304300 0 1268 2036 1315 3246 2315 2315 1 25767 0 APAGDLLPSAFR EAEAYEDDVLAPGGRAPAGDLLPSAFRVPA GGRAPAGDLLPSAFRVPAAFPTKVPVPGPG R A P F R V 3 1 0 1 0 0 0 1 0 0 2 0 0 1 2 1 0 0 0 0 0 0 12 0 1213.6455 Q6ZRV2 Q6ZRV2 620 631 FAM83H Protein FAM83H yes yes 2 0.00071962 136.52 By MS/MS 4 0.816 1 1 1 3 792270 792270 0 1269 1744 1316 3247;3248;3249 2316 2316 1 22343 0 APAGQLPR YKDHQTITIQEMPEKAPAGQLPRSVDVILD IQEMPEKAPAGQLPRSVDVILDDDLVDKAK K A P P R S 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 8 0 808.45554 P25205 P25205 208 215 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.010097 119.57 By MS/MS 4 0 1 1 521310 521310 0 1270 683 1317 3250 2317 2317 1 14231 0 APAMFNIR KVVDPFSKKDWYDVKAPAMFNIRNIGKTLV KDWYDVKAPAMFNIRNIGKTLVTRTQGTKI K A P I R N 2 1 1 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 8 0 918.47456 P61247 P61247 35 42 RPS3A 40S ribosomal protein S3a yes yes 2 0.011778 110.36 By MS/MS 8 0 1 1 5553900 5553900 0 1271 1094 1318 3251 2318 2318 861 1 366390 0 APASVLPAATPR VEFAVEYFTRLREARAPASVLPAATPRQSL EARAPASVLPAATPRQSLGHPPPEPGPDRV R A P P R Q 4 1 0 0 0 0 0 0 0 0 1 0 0 0 3 1 1 0 0 1 0 0 12 0 1149.6506 P13861 P13861 45 56 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2 0.017971 88.134 By MS/MS 6.5 0.5 1 1 2 2899400 2899400 0 1272 584 1319 3252;3253 2319 2319 1 26932 0 APAVQDLLTR SLVQEIHHYVTSIAKAPAVQDLLTRLLQAL TSIAKAPAVQDLLTRLLQALHIDGPRSAQV K A P T R L 2 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 10 0 1082.6084 Q9NU22 Q9NU22 3340 3349 MDN1 Midasin yes yes 2 0.00026543 151.22 By MS/MS 1.5 0.5 1 1 2 1818100 1818100 0 1273 2635 1320 3254;3255 2320 2320 1 88946 0 APDFVFYAPR SFNDKKFVIKPIDKKAPDFVFYAPRLRINK PIDKKAPDFVFYAPRLRINKRILQLCMGNH K A P P R L 2 1 0 1 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 1 0 0 10 0 1181.5869 P15311;P26038;P35241 P15311 264 273 EZR;MSN;RDX Ezrin;Moesin;Radixin yes no 2 0.00082987 130.75 By MS/MS 5 0 1 1 1979900 1979900 0 1274 598 1321 3256 2321 2321 1 81381 0 APDGYIVK EFKFPPKDGFVALSKAPDGYIVKSQHSGNA GFVALSKAPDGYIVKSQHSGNAQVTQTKFL K A P V K S 1 0 0 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 1 1 0 0 8 0 861.45962 Q92499 Q92499 261 268 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.047128 92.47 By MS/MS 5 0 1 1 1143100 1143100 0 1275 2051 1322 3257 2322 2322 1 46985 0 APDQAAEIGSR GSRGLCTRLATPPRRAPDQAAEIGSRGSTK PPRRAPDQAAEIGSRGSTKAQGPQQQPGSE R A P S R G 3 1 0 1 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 11 0 1113.5415 Q3ZCQ8 Q3ZCQ8 33 43 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.0015925 125.72 By MS/MS 7 0 1 1 1239000 1239000 0 1276 1573 1323 3258 2323 2323 1 22141 0 APDVEQAIEVLTR SSANHSLQLASQIQKAPDVEQAIEVLTRSS QKAPDVEQAIEVLTRSSLEVELAAKEREIA K A P T R S 2 1 0 1 0 1 2 0 0 1 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1439.762 Q13948;P39880 Q13948 284 296 CUX1 Protein CASP;Homeobox protein cut-like 1 yes no 2 0.0010576 150.51 By MS/MS 4.5 0.5 1 1 2 388610 388610 0 1277 1403 1324 3259;3260 2324 2324 1 15625 0 APEEFELLSK LLVDGFYAAEQVLQKAPEEFELLSKVPLKH QVLQKAPEEFELLSKVPLKHEYIEDVGECH K A P S K V 1 0 0 0 0 0 3 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 10 0 1161.5918 Q9NVH6 Q9NVH6 285 294 TMLHE Trimethyllysine dioxygenase, mitochondrial yes yes 2 0.00093849 125.71 By MS/MS 7.5 0.5 1 1 2 2456300 2456300 0 1278 2653 1325 3261;3262 2325 2325 1 57060 0 APEILLGCK PVRTYTHEVVTLWYRAPEILLGCKYYSTAV VTLWYRAPEILLGCKYYSTAVDIWSLGCIF R A P C K Y 1 0 0 0 1 0 1 1 0 1 2 1 0 0 1 0 0 0 0 0 0 0 9 0 999.5423 P24941 P24941 170 178 CDK2 Cyclin-dependent kinase 2 yes yes 2 0.0068847 111.95 By MS/MS 8 0 1 1 1368200 1368200 0 1279 682 1326 3263 2326 2326 1 90261 0 APELFSYIAK YSSAAEQLLAEYLERAPELFSYIAKNSQED EYLERAPELFSYIAKNSQEDVFYEDDIWPG R A P A K N 2 0 0 0 0 0 1 0 0 1 1 1 0 1 1 1 0 0 1 0 0 0 10 0 1137.607 Q8IZH2 Q8IZH2 994 1003 XRN1 5-3 exoribonuclease 1 yes yes 2 0.052093 82.645 By MS/MS 3 0 1 1 282610 282610 0 1280 1887 1327 3264 2327 2327 1 7377.6 0 APELLFGAR PNRAYTHQVVTRWYRAPELLFGARMYGVGV VTRWYRAPELLFGARMYGVGVDMWAVGCIL R A P A R M 2 1 0 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 9 0 972.53927 P50613 P50613 180 188 CDK7 Cyclin-dependent kinase 7 yes yes 2 0.021459 95.909 By MS/MS 7.5 0.5 1 1 2 739210 739210 0 1281 950 1328 3265;3266 2328 2328 1 29834 0 APEPTPQQVAQQQ LQMSERNILSRLANRAPEPTPQQVAQQQ__ NRAPEPTPQQVAQQQ_______________ R A P Q Q - 2 0 0 0 0 5 1 0 0 0 0 0 0 0 3 0 1 0 0 1 0 0 13 0 1420.6947 Q14839 Q14839 1900 1912 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 3.5866E-05 163.66 By MS/MS 2 0 1 1 242640 242640 0 1282 1449 1329 3267 2329 2329 1 12060 0 APFDLFENK EGQLEFRALLFIPRRAPFDLFENKKKKNNI LFIPRRAPFDLFENKKKKNNIKLYVRRVFI R A P N K K 1 0 1 1 0 0 1 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 9 0 1079.5288 P08238;Q58FF7 P08238 339 347 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0012486 137.9 By MS/MS 4 2 1 1 1 1 1 1 1 7 11771000 11771000 0 1283 501 1330 3268;3269;3270;3271;3272;3273;3274 2330;2331;2332 2331 3 371820 0 APFDLFENKK EGQLEFRALLFIPRRAPFDLFENKKKKNNI FIPRRAPFDLFENKKKKNNIKLYVRRVFIM R A P K K K 1 0 1 1 0 0 1 0 0 0 1 2 0 2 1 0 0 0 0 0 0 0 10 1 1207.6237 P08238;Q58FF7 P08238 339 348 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2;3 7.2657E-10 199.89 By MS/MS 4.8 0.748 2 2 1 5 4406300 4406300 0 1284 501 1331 3275;3276;3277;3278;3279 2333;2334;2335 2334 3 133730 0 APFDLFENR EGQLEFRALLFVPRRAPFDLFENRKKKNNI LFVPRRAPFDLFENRKKKNNIKLYVRRVFI R A P N R K 1 1 1 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 9 0 1107.5349 P07900 P07900 347 355 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.00063318 150.36 By MS/MS 4.5 1.12 1 1 1 1 4 10481000 10481000 0 1285 494 1332 3280;3281;3282;3283 2336;2337;2338 2337 3 288740 0 APGAEEYAQQDVLK PGVLHCTTKFCDYGKAPGAEEYAQQDVLKK KAPGAEEYAQQDVLKKSYSKAFTLTISALF K A P L K K 3 0 0 1 0 2 2 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 14 0 1517.7362 P09543 P09543 262 275 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 4.5424E-12 202 By MS/MS By matching 7 0 2 1 1 6558700 6539800 18842 1286 516 1333 3284;3285 2339 2339 1 116870 77352 APGAEEYAQQDVLKK PGVLHCTTKFCDYGKAPGAEEYAQQDVLKK APGAEEYAQQDVLKKSYSKAFTLTISALFV K A P K K S 3 0 0 1 0 2 2 1 0 0 1 2 0 0 1 0 0 0 1 1 0 0 15 1 1645.8312 P09543 P09543 262 276 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 4.1368E-20 252.96 By MS/MS 6.5 0.5 1 1 2 2760600 2760600 0 1287 516 1334 3286;3287 2340 2340 1 44336 0 APGAGLGQDR SSSWLTRRAIRPENRAPGAGLGQDRQVPLW RPENRAPGAGLGQDRQVPLWGQLLLFLVFV R A P D R Q 2 1 0 1 0 1 0 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 940.47264 P50402 P50402 212 221 EMD Emerin yes yes 2 0.0027233 114.89 By MS/MS By matching 8.4 1.02 1 2 1 1 3 2 24012000 23819000 192670 1288 945 1335 3288;3289;3290;3291;3292 2341;2342 2341 2 2556900 1552800 APGEQTVPALNLQNAFR ATFVKEITYRASNIKAPGEQTVPALNLQNA GEQTVPALNLQNAFRIIKEVQKRYKTREAE K A P F R I 3 1 2 0 0 2 1 1 0 0 2 0 0 1 2 0 1 0 0 1 0 0 17 0 1824.9482 Q9Y5B9 Q9Y5B9 607 623 SUPT16H FACT complex subunit SPT16 yes yes 2 0.0029673 112.02 By MS/MS 2 0.816 1 1 1 3 1093100 1093100 0 1289 2968 1336 3293;3294;3295 2343;2344;2345;2346;2347 2347 5 34572 0 APGETALIDR NLQILTRRLRFRLERAPGETALIDRTGRML FRLERAPGETALIDRTGRMLKMEPLATVES R A P D R T 2 1 0 1 0 0 1 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1041.5455 Q9ULT8 Q9ULT8 1006 1015 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00094159 125.57 By MS/MS 3 1.41 1 1 1 1 1 5 4093800 4093800 0 1290 2826 1337 3296;3297;3298;3299;3300 2348 2348 1 166290 0 APGFAHLAGLDK LVSDGSSRPYRCKIKAPGFAHLAGLDKMSK KIKAPGFAHLAGLDKMSKGHMLADVVAIIG K A P D K M 3 0 0 1 0 0 0 2 1 0 2 1 0 1 1 0 0 0 0 0 0 0 12 0 1195.635 O75306 O75306 426 437 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2;3 0.00014114 155.42 By MS/MS 7 0 2 2 11483000 11483000 0 1291 294 1338 3301;3302 2349;2350 2349 1 205200 0 APGFAQMLK ______________________________ ALHVPKAPGFAQMLKEGAKHFSGLEEAVYR K A P L K E 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 0 0 0 0 0 0 0 9 0 961.50552 P50990 P50990 8 16 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0002764 155.51 By MS/MS 5.8 0.748 2 2 1 5 69510000 69510000 0 1292 955 1339;1340 3303;3304;3305;3306;3307 2351;2352;2353;2354 2352 702 4 585480 0 APGFGDNR VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM LQVVAVKAPGFGDNRKNQLKDMAIATGGAV K A P N R K 1 1 1 1 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 8 0 832.38277 P10809 P10809 302 309 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.012435 116.54 By MS/MS 6.5 1.12 1 1 1 1 4 52353000 52353000 0 1293 544 1341 3308;3309;3310;3311 2355;2356;2357 2357 3 489380 0 APGFGDNRK VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM QVVAVKAPGFGDNRKNQLKDMAIATGGAVF K A P R K N 1 1 1 1 0 0 0 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 9 1 960.47773 P10809 P10809 302 310 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.014432 118.5 By MS/MS By matching 5.78 1.47 1 1 1 3 2 1 8 1 54167000 54099000 67290 1294 544 1342 3312;3313;3314;3315;3316;3317;3318;3319;3320 2358;2359;2360 2358 3 472000 206370 APGIIPR KGPIGSKTRRRVGLKAPGIIPRISVREPMQ TRRRVGLKAPGIIPRISVREPMQTGIKAVD K A P P R I 1 1 0 0 0 0 0 1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 7 0 722.44391 P25705 P25705 176 182 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.030416 114.67 By MS/MS By matching 6.33 0.471 2 1 2 1 50087000 49909000 178130 1295 687 1343 3321;3322;3323 2361 2361 1 401880 546300 APGLGAFR EKMYERMYAALGDPKAPGLGAFRRKFIQTF AALGDPKAPGLGAFRRKFIQTFGKEFDKHF K A P F R R 2 1 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 8 0 787.43407 P78527 P78527 3622 3629 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.034077 97.596 By MS/MS 2.5 1.12 1 1 1 1 4 6673300 6673300 0 1296 1197 1344 3324;3325;3326;3327 2362;2363;2364;2365 2362 4 286340 0 APGLGLVLER VLERSWGTEKVDVPKAPGLGLVLERVHFEK VDVPKAPGLGLVLERVHFEKYNQRFGNDGL K A P E R V 1 1 0 0 0 0 1 2 0 0 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1023.6077 Q9Y606 Q9Y606 328 337 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 0.00077622 133.23 By MS/MS 7 0 1 1 2606200 2606200 0 1297 2992 1345 3328 2366 2366 1 46574 0 APGPQAGPGPGVR NATASLEQERSERPRAPGPQAGPGPGVRDA PRAPGPQAGPGPGVRDAAAPAEPQAQHTRS R A P V R D 2 1 0 0 0 1 0 4 0 0 0 0 0 0 4 0 0 0 0 1 0 0 13 0 1159.6098 O76024 O76024 43 55 WFS1 Wolframin yes yes 2 0.0071882 99.013 By MS/MS 1 0 1 1 0 0 0 1298 343 1346 3329 2367 2367 1 0 0 APGPWDPLASAAGLK PHCLSEEEGEQDRPRAPGPWDPLASAAGLK APGPWDPLASAAGLKEGGKRKKQKQREESK R A P L K E 4 0 0 1 0 0 0 2 0 0 2 1 0 0 3 1 0 1 0 0 0 0 15 0 1449.7616 O75190 O75190 288 302 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 2 0.0052723 103.44 By MS/MS 7 0 1 1 569940 569940 0 1299 291 1347 3330 2368 2368 1 10185 0 APGSVVELLGK AWGSRPPAAECATQRAPGSVVELLGKSYPQ ATQRAPGSVVELLGKSYPQDDHSNLTRKVL R A P G K S 1 0 0 0 0 0 1 2 0 0 2 1 0 0 1 1 0 0 0 2 0 0 11 0 1068.6179 O95363 O95363 46 56 FARS2 Phenylalanine--tRNA ligase, mitochondrial yes yes 2 0.00020231 154.85 By MS/MS 7.5 0.5 1 1 2 4516400 4516400 0 1300 386 1348 3331;3332 2369 2369 1 86156 0 APILIATDVASR QQERDWVLNEFKHGKAPILIATDVASRGLD HGKAPILIATDVASRGLDVEDVKFVINYDY K A P S R G 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1225.703 Q92841;P17844 P17844 392 403 DDX17;DDX5 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 2 0.00019051 153.1 By MS/MS By MS/MS 5.75 0.829 2 1 1 3 1 18350000 18295000 55131 1301 616;2082 1349 3333;3334;3335;3336 2370;2371;2372;2373 2371 3 653910 163130 APIQDIWYHEDR EPVFQRPRVRYGKAKAPIQDIWYHEDRIRA KAKAPIQDIWYHEDRIRAKFYSVYGSGQRA K A P D R I 1 1 0 2 0 1 1 0 1 2 0 0 0 0 1 0 0 1 1 0 0 0 12 0 1541.7263 Q9Y3D9 Q9Y3D9 58 69 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 0.00040785 142.89 By MS/MS 9 0 1 1 610860 610860 0 1302 2935 1350 3337 2374 2374 1 350580 0 APIQWEER PEISAAVMKIFDAAKAPIQWEERNVTAIQG KIFDAAKAPIQWEERNVTAIQGPGGKWMIP K A P E R N 1 1 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 8 0 1027.5087 P50213 P50213 59 66 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.051888 90.601 By MS/MS 7 0.816 1 1 1 3 12977000 12977000 0 1303 943 1351 3338;3339;3340 2375;2376 2375 2 343080 0 APIVTVGVNNDPADVR NKRTQIVTEIISEIRAPIVTVGVNNDPADV PIVTVGVNNDPADVRKKELKMAEIKVKLIE R A P V R K 2 1 2 2 0 0 0 1 0 1 0 0 0 0 2 0 1 0 0 4 0 0 16 0 1635.858 Q9BPX3 Q9BPX3 471 486 NCAPG Condensin complex subunit 3 yes yes 2 3.5875E-10 210.91 By MS/MS 3.5 0.5 1 1 2 4356700 4356700 0 1304 2302 1352 3341;3342 2377 2377 1 118720 0 APLAVTSQVINCR LSVILMLEVGEGSHRAPLAVTSQVINCRNQ HRAPLAVTSQVINCRNQAVQFISALVDELK R A P C R N 2 1 1 0 1 1 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 13 0 1427.7555 P42695 P42695 319 331 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 2.7637E-05 166.69 By MS/MS 3 0 1 1 1306200 1306200 0 1305 853 1353 3343 2378 2378 1 34098 0 APLDLDKYVEIAR ______________________________ ______________________________ M A P A R L 2 1 0 2 0 0 1 0 0 1 2 1 0 0 1 0 0 0 1 1 0 0 13 1 1501.814 O00743 O00743 2 14 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2;3 0.00057469 147.62 By MS/MS 8.5 0.5 2 2 4 3932300 3932300 0 1306 106 1354 3344;3345;3346;3347 2379;2380 2379 2 394470 0 APLKPYPVSPSDK SVIESHTEFIFTTIKAPLKPYPVSPSDKVL IKAPLKPYPVSPSDKVLIQEKTQLKGSELE K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 P41252 P41252 1039 1051 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.029247 77.527 By MS/MS 3.5 0.5 1 1 2 4099800 4099800 0 1307 840 1355 3348;3349 2381 2381 1 107260 0 APLQQCAEDR LELPELGCVEMTDLKAPLQQCAEDRQICPS MTDLKAPLQQCAEDRQICPSLAGFQFTQWD K A P D R Q 2 1 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 1186.5401 Q15003 Q15003 304 313 NCAPH Condensin complex subunit 2 yes yes 2 5.728E-05 170.47 By MS/MS 4 0 1 1 1227400 1227400 0 1308 1457 1356 3350 2382 2382 1 33507 0 APLSQLYFCR SDRVLYLVQGEKKVRAPLSQLYFCRYCSEL EKKVRAPLSQLYFCRYCSELRSLECVSHEV R A P C R Y 1 1 0 0 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 10 0 1253.6227 Q9UJW0 Q9UJW0 22 31 DCTN4 Dynactin subunit 4 yes yes 2 0.0066206 131.62 By MS/MS 6 0 1 1 0 0 0 1309 2801 1357 3351 2383 2383 1 0 0 APLVKVEEATVEER KEPQKVANEPSLKGRAPLVKVEEATVEERT RAPLVKVEEATVEERTPAEPEVGPAAPAMA R A P E R T 2 1 0 0 0 0 4 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 14 1 1568.841 Q14244 Q14244 402 415 MAP7 Ensconsin yes yes 3 0.0010149 115.83 By MS/MS 4 0 1 1 1211900 1211900 0 1310 1423 1358 3352 2384 2384 1 33084 0 APMVNPTLGVHEADLLK GAKEVLASDLVVKVRAPMVNPTLGVHEADL MVNPTLGVHEADLLKTSGTLISFIYPAQNP R A P L K T 2 0 1 1 0 0 1 1 1 0 3 1 1 0 2 0 1 0 0 2 0 0 17 0 1803.9553 Q13423 Q13423 130 146 NNT NAD(P) transhydrogenase, mitochondrial yes yes 3 0.027115 66.738 By MS/MS 2 0.816 1 1 1 3 619800 619800 0 1311 1367 1359 3353;3354;3355 2385 2385 1065 1 25780 0 APPAPGPASGGSGEVDELFDVK ______________________________ ASGGSGEVDELFDVKNAFYIGSYQQCINEA M A P V K N 3 0 0 2 0 0 2 4 0 0 1 1 0 1 4 2 0 0 0 2 0 0 22 0 2096.0062 O14579 O14579 2 23 COPE Coatomer subunit epsilon yes yes 2;3 7.4022E-10 154.46 By MS/MS 8.75 0.829 2 1 1 4 13939000 13939000 0 1312 115 1360 3356;3357;3358;3359 2386;2387 2386 2 1010200 0 APPPSLTDCIGTVDSR ______________________________ PPPSLTDCIGTVDSRAESIDKKISRLDAEL K A P S R A 1 1 0 2 1 0 0 1 0 1 1 0 0 0 3 2 2 0 0 1 0 0 16 0 1684.809 Q9NZZ3 Q9NZZ3 12 27 CHMP5 Charged multivesicular body protein 5 yes yes 2 0.0085739 96.23 By MS/MS 8 0 1 1 865290 865290 0 1313 2718 1361 3360 2388 2388 1 57083 0 APQCLGK KQMADTGKLNTLLQRAPQCLGKFIEIAARK KLNTLLQRAPQCLGKFIEIAARKKRNFILD R A P G K F 1 0 0 0 1 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 7 0 772.39016 Q00839 Q00839 559 565 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.050496 101.21 By MS/MS By matching 4 0 2 1 1 936300 912740 23566 1314 1238 1362 3361;3362 2389 2389 1 24917 49243 APQETYADIGGLDNQIQEIK MDDTDPLVTVMKVEKAPQETYADIGGLDNQ YADIGGLDNQIQEIKESVELPLTHPEYYEE K A P I K E 2 0 1 2 0 3 2 2 0 3 1 1 0 0 1 0 1 0 1 0 0 0 20 0 2202.0804 P62191 P62191 179 198 PSMC1 26S protease regulatory subunit 4 yes yes 2;3 6.645E-13 218.34 By MS/MS 6.75 0.829 2 1 1 4 17674000 17674000 0 1315 1116 1363 3363;3364;3365;3366 2390;2391 2390 2 156650 0 APQLVGQFIAR KLLKDLPELALDTPRAPQLVGQFIARAVGD DTPRAPQLVGQFIARAVGDGILCNTYIDSY R A P A R A 2 1 0 0 0 2 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 11 0 1198.6822 Q53EL6 Q53EL6 257 267 PDCD4 Programmed cell death protein 4 yes yes 2 0.00060208 138.98 By MS/MS 6 0 1 1 4623100 4623100 0 1316 1581 1364 3367 2392 2392 1 36051 0 APSDLYQIILK EDFTGGVTEWYELRKAPSDLYQIILKALER ELRKAPSDLYQIILKALERGSLLGCSIDIS K A P L K A 1 0 0 1 0 1 0 0 0 2 2 1 0 0 1 1 0 0 1 0 0 0 11 0 1259.7125 P07384 P07384 230 240 CAPN1 Calpain-1 catalytic subunit yes yes 2 0.011006 97.456 By MS/MS 5 0 1 1 121560 121560 0 1317 489 1365 3368 2393 2393 1 4996.7 0 APSEEDSLSSVPISPYKDEPWK GSHRVQVPLQTLCTKAPSEEDSLSSVPISP LSSVPISPYKDEPWKYLESEEYQERYGSRP K A P W K Y 1 0 0 2 0 0 3 0 0 1 1 2 0 0 4 5 0 1 1 1 0 0 22 1 2460.1697 Q9Y676 Q9Y676 36 57 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 3 5.0183E-06 117.29 By MS/MS 8 0 1 1 845200 845200 0 1318 2995 1366 3369 2394 2394 1 55758 0 APSHLSVR ______________________________ ______________________________ M A P V R E 1 1 0 0 0 0 0 0 1 0 1 0 0 0 1 2 0 0 0 1 0 0 8 0 865.477 Q8WUY8 Q8WUY8 2 9 NAT14 N-acetyltransferase 14 yes yes 2 0.019122 107.9 By MS/MS 8.5 0.5 1 1 2 1109300 1109300 0 1319 2021 1367 3370;3371 2395 2395 1 287580 0 APSIIFIDELDAIGTK GAKLVRDAFALAKEKAPSIIFIDELDAIGT PSIIFIDELDAIGTKRFDSEKAGDREVQRT K A P T K R 2 0 0 2 0 0 1 1 0 4 1 1 0 1 1 1 1 0 0 0 0 0 16 0 1701.9189 P17980 P17980 279 294 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.00027335 163.51 By MS/MS 6 0 1 1 4772000 4772000 0 1320 618 1368 3372 2396 2396 1 37212 0 APSIIFIDELDAIGTKR GAKLVRDAFALAKEKAPSIIFIDELDAIGT SIIFIDELDAIGTKRFDSEKAGDREVQRTM K A P K R F 2 1 0 2 0 0 1 1 0 4 1 1 0 1 1 1 1 0 0 0 0 0 17 1 1858.02 P17980 P17980 279 295 PSMC3 26S protease regulatory subunit 6A yes yes 3 0.0070307 88.311 By MS/MS 6 0 1 1 849750 849750 0 1321 618 1369 3373 2397 2397 1 6626.4 0 APSLTLR AMYLCEWCRTRDQNRAPSLTLRNFLSRNRL CRTRDQNRAPSLTLRNFLSRNRLMITHHAV R A P L R N 1 1 0 0 0 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 0 0 7 0 756.44939 Q8TBR7 Q8TBR7 105 111 FAM57A Protein FAM57A yes yes 2 0.029271 115.46 By MS/MS 1 0 1 1 285330 285330 0 1322 1990 1370 3374 2398 2398 1 13941 0 APSPEKAEEESER EGSDELTQGYIYFHKAPSPEKAEEESERLL HKAPSPEKAEEESERLLRELYLFDVLRADR K A P E R L 2 1 0 0 0 0 5 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 13 1 1457.6634 P08243 P08243 380 392 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 3 0.049726 83.53 By MS/MS 6 0 1 1 2033500 2033500 0 1323 503 1371 3375 2399 2399 1 15857 0 APSTWEESGLRYDK QEQREKQPLEESASRAPSTWEESGLRYDKA RAPSTWEESGLRYDKAYPGDRRLSSVMTIV R A P D K A 1 1 0 1 0 0 2 1 0 0 1 1 0 0 1 2 1 1 1 0 0 0 14 1 1637.7686 Q9HC36 Q9HC36 83 96 RNMTL1 rRNA methyltransferase 3, mitochondrial yes yes 2 0.0038532 137.4 By MS/MS 6 0 1 1 2094200 2094200 0 1324 2558 1372 3376 2400 2400 1 16331 0 APSTYGGGLSVSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSRF RAPSTYGGGLSVSSRFSSGGACGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 4 1 0 1 1 0 0 14 0 1337.6575 CON__P08779;P08779 CON__P08779 42 55 KRT16 Keratin, type I cytoskeletal 16 yes no 2 2.6604E-08 190.36 By MS/MS By MS/MS 5.2 2.75 1 1 1 1 2 1 1 1 1 2 8 4778700 982700 3796000 + 1325 47 1373 3377;3378;3379;3380;3381;3382;3383;3384;3385;3386 2401;2402;2403;2404;2405;2406 2403 6 87543 10909000 APSTYGGGLSVSSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSSR APSTYGGGLSVSSSRFSSGGAYGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 5 1 0 1 1 0 0 15 0 1424.6896 CON__P02533;P02533 CON__P02533 42 56 KRT14 Keratin, type I cytoskeletal 14 yes no 2 1.8164E-20 219.74 By MS/MS By MS/MS 5.2 2.99 2 2 1 2 2 1 2 2 1 7 8 11689000 4339000 7350400 + 1326 35 1374 3387;3388;3389;3390;3391;3392;3393;3394;3395;3396;3397;3398;3399;3400;3401 2407;2408;2409;2410;2411;2412;2413;2414;2415;2416;2417;2418;2419;2420 2419 14 978310 19039000 APSYLEISSMR GCVVVDGMPPGVSFKAPSYLEISSMRRILD VSFKAPSYLEISSMRRILDSAEFIKFTVIR K A P M R R 1 1 0 0 0 0 1 0 0 1 1 0 1 0 1 3 0 0 1 0 0 0 11 0 1252.6122 P78347 P78347 917 927 GTF2I General transcription factor II-I yes yes 2 0.00035579 141.93 By MS/MS 3.5 0.5 1 1 2 2027800 2027800 0 1327 1194 1375 3402;3403 2421 2421 938 1 53197 0 APTADTQTQNVNQAK SRPKTPFKAWNDTTKAPTADTQTQNVNQAK APTADTQTQNVNQAKMATSQADIETDPGIS K A P A K M 3 0 2 1 0 3 0 0 0 0 0 1 0 0 1 0 3 0 0 1 0 0 15 0 1585.7696 Q9Y5V3 Q9Y5V3 190 204 MAGED1 Melanoma-associated antigen D1 yes yes 2 6.0602E-63 295.26 By MS/MS By MS/MS 4.33 0.471 2 1 2 1 1886600 1857700 28862 1328 2982 1376 3404;3405;3406 2422;2423 2423 2 52736 60309 APTIVGK GQHTLIVADTENLLKAPTIVGKSSLNPILF ADTENLLKAPTIVGKSSLNPILFRGVGMVA K A P G K S 1 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 1 0 0 1 0 0 7 0 684.41703 P39656 P39656 183 189 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.017424 133.47 By MS/MS By matching 6 0 2 1 1 10658000 10632000 26802 1329 825 1377 3407;3408 2424 2424 1 82906 82201 APTNIVYK ISQVTIVGIIRHAEKAPTNIVYKIDDMTAA IIRHAEKAPTNIVYKIDDMTAAPMDVRQWV K A P Y K I 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 8 0 904.50182 P15927 P15927 86 93 RPA2 Replication protein A 32 kDa subunit yes yes 2 0.02209 104.06 By MS/MS 8 0 1 1 1093000 1093000 0 1330 604 1378 3409 2425 2425 1 72104 0 APVEEAFLYAK KLTSQAFIETMFTSKAPVEEAFLYAKFEFE FTSKAPVEEAFLYAKFEFECRARGADILAY K A P A K F 3 0 0 0 0 0 2 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 11 0 1236.639 Q9NQH7 Q9NQH7 275 285 XPNPEP3 Probable Xaa-Pro aminopeptidase 3 yes yes 2 0.0019482 125.48 By MS/MS 6.5 0.5 1 1 2 3674500 3674500 0 1331 2590 1379 3410;3411 2426 2426 1 32451 0 APVIDIGIANTGK YTFTATPEDFPKKHKAPVIDIGIANTGKFI HKAPVIDIGIANTGKFIMTASSDTTVLIWS K A P G K F 2 0 1 1 0 0 0 2 0 3 0 1 0 0 1 0 1 0 0 1 0 0 13 0 1267.7136 Q9Y4P3 Q9Y4P3 189 201 TBL2 Transducin beta-like protein 2 yes yes 2 0.0014379 125.97 By MS/MS 7 0 1 1 5851600 5851600 0 1332 2957 1380 3412 2427 2427 1 104570 0 APVLFNK EVDILISTALIPGKKAPVLFNKEMIESMKE TALIPGKKAPVLFNKEMIESMKEGSVVVDL K A P N K E 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 7 0 787.45922 Q13423 Q13423 325 331 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.03389 112.27 By MS/MS 1 0 1 1 146590 146590 0 1333 1367 1381 3413 2428 2428 1 7162 0 APVLSDSSCK KSSGSSYPSLLQCLKAPVLSDSSCKSSYPG LQCLKAPVLSDSSCKSSYPGQITGNMICVG K A P C K S 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 3 0 0 0 1 0 0 10 0 1062.5016 CON__P00761 CON__P00761 148 157 yes yes 2 4.2065E-07 190.26 By MS/MS By MS/MS 5.47 2.94 2 2 2 2 2 1 2 2 2 2 9 10 52992000 21909000 31083000 + 1334 33 1382 3414;3415;3416;3417;3418;3419;3420;3421;3422;3423;3424;3425;3426;3427;3428;3429;3430;3431;3432 2429;2430;2431;2432;2433;2434;2435;2436;2437;2438;2439;2440;2441;2442;2443;2444;2445;2446;2447 2429 19 3483300 174350000 APVPGTPDSLSSGSSR SMVAQAMGVYGALTKAPVPGTPDSLSSGSS PVPGTPDSLSSGSSRDVQGTDASLDEELDR K A P S R D 1 1 0 1 0 0 0 2 0 0 1 0 0 0 3 5 1 0 0 1 0 0 16 0 1513.7372 Q9UJZ1 Q9UJZ1 322 337 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.0019477 115.57 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 9594700 9436400 158390 1335 2806 1383 3433;3434;3435 2448;2449 2449 2 190150 650230 APVPTGEVYFADSFDR PDTTAPPSSPKVTYKAPVPTGEVYFADSFD PVPTGEVYFADSFDRGTLSGWILSKAKKDD K A P D R G 2 1 0 2 0 0 1 1 0 0 0 0 0 2 2 1 1 0 1 2 0 0 16 0 1769.8261 P27824 P27824 62 77 CANX Calnexin yes yes 2 9.2125E-05 136.3 By MS/MS 4 0 1 1 859030 859030 0 1336 711 1384 3436 2450 2450 1 23451 0 APVQPQQSPAAAPGGTDEKPSGK ______________________________ PAAAPGGTDEKPSGKERRDAGDKDKEQELS K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 Q13200 Q13200 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.0016148 75.106 By MS/MS 4 0 1 1 448590 448590 0 1337 1347 1385 3437 2451 2451 1 12246 0 APVTCTPGQPGQQR AGGKGNRFFLANNNRAPVTCTPGQPGQQRV RAPVTCTPGQPGQQRVLHLELKTVAHAGMV R A P Q R V 1 1 0 0 1 3 0 2 0 0 0 0 0 0 3 0 2 0 0 1 0 0 14 0 1495.7202 Q9H4K7 Q9H4K7 202 215 MTG2 Mitochondrial ribosome-associated GTPase 2 yes yes 2 1.9165E-05 160.72 By MS/MS 7 0 1 1 864000 864000 0 1338 2501 1386 3438 2452 2452 1 15440 0 APWIEQEGPEYWDR VRFDSDAASPREEPRAPWIEQEGPEYWDRN RAPWIEQEGPEYWDRNTQIYKAQAQTDRES R A P D R N 1 1 0 1 0 1 3 1 0 1 0 0 0 0 2 0 0 2 1 0 0 0 14 0 1774.7951 P01889 P01889 73 86 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain yes yes 2 8.9568E-05 149.41 By MS/MS 7 0 1 1 344300 344300 0 1339 436 1387 3439 2453 2453 1 6152.7 0 APWVEQEGPEYWDR VRFDSDAASPRGEPRAPWVEQEGPEYWDRE RAPWVEQEGPEYWDRETQKYKRQAQADRVS R A P D R E 1 1 0 1 0 1 3 1 0 0 0 0 0 0 2 0 0 2 1 1 0 0 14 0 1760.7794 P10321 P10321 73 86 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 0.00039047 134.99 By MS/MS 7 0 1 1 649130 649130 0 1340 536 1388 3440 2454 2454 1 11600 0 APYIAYLTR CRKLLASIAEDYRKRAPYIAYLTRCRQGLQ EDYRKRAPYIAYLTRCRQGLQTTQAHLERL R A P T R C 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 2 0 0 0 9 0 1066.5811 Q14C86 Q14C86 1211 1219 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0067288 111.95 By MS/MS 2 0 1 1 221980 221980 0 1341 1455 1389 3441 2455 2455 1 11033 0 AQAAAPASVPAQAPK RPKAKAKAKAKDQTKAQAAAPASVPAQAPK AQAAAPASVPAQAPKRTQAPTKASE_____ K A Q P K R 7 0 0 0 0 2 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1376.7412 P47914 P47914 135 149 RPL29 60S ribosomal protein L29 yes yes 2 1.2491E-05 162.93 By MS/MS By matching 8.33 0.471 2 1 2 1 997350 936840 60514 1342 897 1390 3442;3443;3444 2456;2457 2456 2 61803 516260 AQAALAVNISAAR MAAVKTLNPKAEVARAQAALAVNISAARGL ARAQAALAVNISAARGLQDVLRTNLGPKGT R A Q A R G 6 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1254.7044 P40227 P40227 16 28 CCT6A T-complex protein 1 subunit zeta yes yes 2 2.3466E-12 211.64 By MS/MS 6 0 1 1 38155000 38155000 0 1343 828 1391 3445 2458 2458 1 297540 0 AQAEDYALVSAVATLPK TCFPSEPGLVGPSVRAQAEDYALVSAVATL AEDYALVSAVATLPKQVADHYDNFRIYKAL R A Q P K Q 5 0 0 1 0 1 1 0 0 0 2 1 0 0 1 1 1 0 1 2 0 0 17 0 1745.92 Q96GW9 Q96GW9 442 458 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 1.9482E-56 258.42 By MS/MS 6 0 1 1 0 0 0 1344 2186 1392 3446 2459 2459 1 0 0 AQAELENVSGALNEAESK DGERARAEAAEKLQRAQAELENVSGALNEA ELENVSGALNEAESKTIRLSKELSSTEAQL R A Q S K T 4 0 2 0 0 1 4 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 18 0 1858.8909 Q7Z406 Q7Z406 1302 1319 MYH14 Myosin-14 yes yes 2 3.2759E-05 137.19 By MS/MS 2 0 1 1 198710 198710 0 1345 1788 1393 3447 2460 2460 1 9877.1 0 AQAELVGTADEATR LDMLDLGAAKANLEKAQAELVGTADEATRA KAQAELVGTADEATRAEIQIRIEANEALVK K A Q T R A 4 1 0 1 0 1 2 1 0 0 1 0 0 0 0 0 2 0 0 1 0 0 14 0 1430.7001 P30049 P30049 137 150 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 6.5281E-19 231.74 By MS/MS By matching 10 0 2 1 1 4199900 4154800 45118 1346 732 1394 3448;3449 2461 2461 1 4416100 1157200 AQAQTDRESLR QEGPEYWDRNTQIYKAQAQTDRESLRNLRG QIYKAQAQTDRESLRNLRGYYNQSEAGSHT K A Q L R N 2 2 0 1 0 2 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 11 1 1273.6375 P01889 P01889 93 103 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain yes yes 2 0.011897 125.48 By MS/MS 7 0 1 1 1992700 1992700 0 1347 436 1395 3450 2462 2462 1 35610 0 AQATAQDPVFQK STMFSSAASESLARRAQATAQDPVFQKLKG ARRAQATAQDPVFQKLKGQFTTDFDFSVPG R A Q Q K L 3 0 0 1 0 3 0 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 12 0 1302.6568 Q9Y4A5 Q9Y4A5 3404 3415 TRRAP Transformation/transcription domain-associated protein yes yes 2 0.011867 95.618 By MS/MS 1 0 1 1 0 0 0 1348 2949 1396 3451 2463 2463 1 0 0 AQAVSEDAGGNEGR EAPGEQARDERSDSRAQAVSEDAGGNEGRA RAQAVSEDAGGNEGRAAEAEPRALENGDAD R A Q G R A 3 1 1 1 0 1 2 3 0 0 0 0 0 0 0 1 0 0 0 1 0 0 14 0 1359.6015 P55884 P55884 121 134 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 5.2594E-26 246.63 By MS/MS By MS/MS 3.57 1.59 1 1 1 2 1 1 5 2 3646900 3556700 90103 1349 1040 1397 3452;3453;3454;3455;3456;3457;3458 2464;2465;2466;2467;2468 2465 5 86341 165640 AQAVSEDAGGNEGRAAEAEPR EAPGEQARDERSDSRAQAVSEDAGGNEGRA DAGGNEGRAAEAEPRALENGDADEPSFSDP R A Q P R A 6 2 1 1 0 1 4 3 0 0 0 0 0 0 1 1 0 0 0 1 0 0 21 1 2083.9519 P55884 P55884 121 141 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.0006726 87.554 By MS/MS By matching 4.33 0.471 2 1 2 1 2804400 2672700 131700 1350 1040 1398 3459;3460;3461 2469 2469 1 76400 275200 AQAYQTGK ASQYGWSGNMERIMKAQAYQTGKDISTNYY NMERIMKAQAYQTGKDISTNYYASQKKTFE K A Q G K D 2 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 8 0 865.42938 P14625;Q58FF3 P14625 664 671 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 2 0.021797 104.44 By MS/MS By matching 4 0 2 1 1 1926800 1918400 8364.9 1351 589 1399 3462;3463 2470 2470 1 52371 17479 AQDEAFALQDVPLSSVVR GLVTLKHVYEIARIKAQDEAFALQDVPLSS EAFALQDVPLSSVVRSIIGSARSLGIRVVK K A Q V R S 3 1 0 2 0 2 1 0 0 0 2 0 0 1 1 2 0 0 0 3 0 0 18 0 1943.9953 Q9Y3B7 Q9Y3B7 125 142 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2;3 0.0043502 132.23 By MS/MS 9 0 2 2 2334600 2334600 0 1352 2927 1400 3464;3465 2471;2472;2473 2471 3 1339900 0 AQDEGLLSDVVPFK EQDEYALRSHSLAKKAQDEGLLSDVVPFKV KAQDEGLLSDVVPFKVPGKDTVTKDNGIRP K A Q F K V 1 0 0 2 0 1 1 1 0 0 2 1 0 1 1 1 0 0 0 2 0 0 14 0 1516.7773 P55084 P55084 255 268 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 4.8788E-06 172.76 By MS/MS 7 0 1 1 607460 607460 0 1353 1027 1401 3466 2474 2474 1 10856 0 AQDEGLLSDVVPFKVPGK EQDEYALRSHSLAKKAQDEGLLSDVVPFKV EGLLSDVVPFKVPGKDTVTKDNGIRPSSLE K A Q G K D 1 0 0 2 0 1 1 2 0 0 2 2 0 1 2 1 0 0 0 3 0 0 18 1 1898.0149 P55084 P55084 255 272 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 3 0.00062889 128.45 By MS/MS 6.5 0.5 1 1 2 2640800 2640800 0 1354 1027 1402 3467;3468 2475 2475 1 23991 0 AQDIEAGDGTTSVVIIAGSLLDSCTK QVLHPAARMLVELSKAQDIEAGDGTTSVVI SVVIIAGSLLDSCTKLLQKGIHPTIISESF K A Q T K L 3 0 0 3 1 1 1 3 0 3 2 1 0 0 0 3 3 0 0 2 0 0 26 0 2620.2902 P50991 P50991 97 122 CCT4 T-complex protein 1 subunit delta yes yes 2;3 6.637E-46 223.9 By MS/MS 5.67 0.471 1 2 3 59382000 59382000 0 1355 956 1403 3469;3470;3471 2476;2477;2478 2476 3 463810 0 AQDIQCGLQSR LEEVFIEVQVPPGTRAQDIQCGLQSRHVAL PGTRAQDIQCGLQSRHVALSVGGREILKGK R A Q S R H 1 1 0 1 1 3 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 11 0 1274.6037 Q8WVJ2 Q8WVJ2 40 50 NUDCD2 NudC domain-containing protein 2 yes yes 2 0.0019759 120.86 By MS/MS 10 0 1 1 307070 307070 0 1356 2031 1404 3472 2479 2479 1 326380 0 AQDLEAAQALAQSER NERKLKKQLKIYMKKAQDLEAAQALAQSER AQDLEAAQALAQSERKRHELNRQVTVQRKE K A Q E R K 5 1 0 1 0 3 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1599.7853 Q9ULV0 Q9ULV0 1434 1448 MYO5B Unconventional myosin-Vb yes yes 2 0.042615 92.151 By matching By MS/MS 2 0 2 1 1 199060 167320 31745 1357 2827 1405 3473;3474 2480 2480 1 8316.6 26726 AQDQGEKENPMR ______________________________ ______________________________ M A Q M R E 1 1 1 1 0 2 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 12 1 1401.6307 P62913 P62913 2 13 RPL11 60S ribosomal protein L11 yes yes 2 0.0021995 135.8 By MS/MS 9 0 1 1 327310 327310 0 1358 1161 1406 3475 2481 2481 1 187840 0 AQDQGEKENPMRELR ______________________________ AQDQGEKENPMRELRIRKLCLNICVGESGD M A Q L R I 1 2 1 1 0 2 3 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 15 2 1799.8584 P62913 P62913 2 16 RPL11 60S ribosomal protein L11 yes yes 3 0.013503 82.515 By MS/MS By matching 9 0 3 2 1 1518700 1451400 67244 1359 1161 1407;1408 3476;3477;3478 2482;2483 2482 904 2 832990 724700 AQDTFQTIEGIIR AQFTVLSKLRTPLGRAQDTFQTIEGIIRSL GRAQDTFQTIEGIIRSLAAHTLNPDQDVSQ R A Q I R S 1 1 0 1 0 2 1 1 0 3 0 0 0 1 0 0 2 0 0 0 0 0 13 0 1490.7729 Q96Q15 Q96Q15 936 948 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.0055977 96.745 By MS/MS 1 0 1 1 59468 59468 0 1360 2241 1409 3479 2484 2484 1 2905.5 0 AQDWEENASR PISKFLNGLEILLAKAQDWEENASRALSLR ILLAKAQDWEENASRALSLRKHLDLISQMI K A Q S R A 2 1 1 1 0 1 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 10 0 1204.5109 Q9NU22 Q9NU22 3784 3793 MDN1 Midasin yes yes 2 0.00043336 158.47 By MS/MS 1 0 1 1 293960 293960 0 1361 2635 1410 3480 2485 2485 1 14362 0 AQEESTGLLSGLR PQAAVALWVKKEFSKAQEESTGLLSGLRIW SKAQEESTGLLSGLRIWHTQLLPGGLQGLI K A Q L R I 1 1 0 0 0 1 2 2 0 0 3 0 0 0 0 2 1 0 0 0 0 0 13 0 1359.6994 Q92759 Q92759 82 94 GTF2H4 General transcription factor IIH subunit 4 yes yes 2 0.00077172 134.18 By MS/MS 7 0 1 1 994390 994390 0 1362 2077 1411 3481 2486 2486 1 17770 0 AQELGLVELLEK ADWYLEQLNSDREQKAQELGLVELLEKEEV EQKAQELGLVELLEKEEVQAGVAAANTKGD K A Q E K E 1 0 0 0 0 1 3 1 0 0 4 1 0 0 0 0 0 0 0 1 0 0 12 0 1340.7551 Q86VI3 Q86VI3 346 357 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 2 0.046761 75.479 By MS/MS 3 0 1 1 61250 61250 0 1363 1827 1412 3482 2487 2487 1 1598.9 0 AQELQAVLGLS TDSFQAALGSLPVDKAQELQAVLGLS____ PVDKAQELQAVLGLS_______________ K A Q L S - 2 0 0 0 0 2 1 1 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1127.6186 Q8TEX9 Q8TEX9 1071 1081 IPO4 Importin-4 yes yes 2 0.0013616 128.81 By MS/MS 4.5 0.5 1 1 2 1010400 1010400 0 1364 2005 1413 3483;3484 2488 2488 1 28264 0 AQENYEGSEEVSPPQTK PAAHHMNNPQRTGQRAQENYEGSEEVSPPQ ENYEGSEEVSPPQTKDQ_____________ R A Q T K D 1 0 1 0 0 2 4 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 17 0 1891.8436 Q93008 Q93008 2536 2552 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 1.2877E-13 180.95 By MS/MS 1.5 0.5 1 1 2 749440 749440 0 1365 2096 1414 3485;3486 2489 2489 1 37187 0 AQENYEGSEEVSPPQTKDQ PAAHHMNNPQRTGQRAQENYEGSEEVSPPQ YEGSEEVSPPQTKDQ_______________ R A Q D Q - 1 0 1 1 0 3 4 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 19 1 2134.9291 Q93008 Q93008 2536 2554 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 7.8544E-07 152.11 By MS/MS 1.5 0.5 1 1 2 552060 552060 0 1366 2096 1415 3487;3488 2490 2490 1 27402 0 AQEPESGLSEETQVK DYVAVARGSKDHNIRAQEPESGLSEETQVK AQEPESGLSEETQVKCLMDQATDPNILGRT R A Q V K C 1 0 0 0 0 2 4 1 0 0 1 1 0 0 1 2 1 0 0 1 0 0 15 0 1630.7686 P78527 P78527 4091 4105 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.0644E-15 217.46 By MS/MS 2.5 1.12 1 1 1 1 4 3147000 3147000 0 1367 1197 1416 3489;3490;3491;3492 2491;2492;2493;2494;2495;2496 2493 6 129140 0 AQEREQIK QPLNVKVDPEIQNVKAQEREQIKTLNNKFA PEIQNVKAQEREQIKTLNNKFASFIDKVRF K A Q I K T 1 1 0 0 0 2 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 8 1 1000.5302 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q14CN4-1;CON__Q6IME9;CON__Q3SY84;Q14CN4;Q3SY84 CON__P35908v2 176 183 KRT2;KRT74;KRT73;KRT72;KRT71 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71 no no 2;3 0.012912 150.36 By MS/MS 5 1.22 1 1 2 4 3121000 0 3121000 + 1368 52;57 1417 3493;3494;3495;3496 2497;2498;2499;2500 2499 4 0 9050800 AQETEAAPSQAPADEPEPESAAAQSQENQDTRPK TKKVSHVADTKVNTKAQETEAAPSQAPADE SAAAQSQENQDTRPKVKAKKARKVKHLDGE K A Q P K V 8 1 1 2 0 5 6 0 0 0 0 1 0 0 5 3 2 0 0 0 0 0 34 1 3577.6041 Q9UNF1 Q9UNF1 138 171 MAGED2 Melanoma-associated antigen D2 yes yes 3 0.0018434 51.617 By MS/MS 5 0 1 1 1997500 1997500 0 1369 2840 1418 3497 2501;2502 2502 2 82106 0 AQFAQPEILIGTIPGAGGTQR CELAMMCDIIYAGEKAQFAQPEILIGTIPG EILIGTIPGAGGTQRLTRAVGKSLAMEMVL K A Q Q R L 3 1 0 0 0 3 1 4 0 3 1 0 0 1 2 0 2 0 0 0 0 0 21 0 2124.1328 P30084 P30084 158 178 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 3 0.0060421 69.256 By MS/MS 8 0 1 1 382680 382680 0 1370 734 1419 3498 2503 2503 1 25245 0 AQFEGIVTDLIR MDSSGPKHLNMKLTRAQFEGIVTDLIRRTI LTRAQFEGIVTDLIRRTIAPCQKAMQDAEV R A Q I R R 1 1 0 1 0 1 1 1 0 2 1 0 0 1 0 0 1 0 0 1 0 0 12 0 1360.7351 P38646 P38646 349 360 HSPA9 Stress-70 protein, mitochondrial yes yes 2 5.6898E-07 178.71 By MS/MS By matching 6 1.15 3 1 1 1 5 1 33721000 33703000 18575 1371 820 1420 3499;3500;3501;3502;3503;3504 2504;2505;2506;2507;2508;2509;2510 2507 7 1074300 54963 AQFLVEK AAVEAKQVAQQEAQRAQFLVEKAKQEQRQK VAQQEAQRAQFLVEKAKQEQRQKIVQAEGE R A Q E K A 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 833.4647 Q99623 Q99623 210 216 PHB2 Prohibitin-2 yes yes 2 0.032233 113.41 By MS/MS By matching 8 0 2 1 1 42798000 42154000 644390 1372 2277 1421 3505;3506 2511 2511 1 2780900 5497500 AQGAIAMASIAK TITQKALQSQSWKMKAQGAIAMASIAKQTS KMKAQGAIAMASIAKQTSSLVPPYLGMILT K A Q A K Q 5 0 0 0 0 1 0 1 0 2 0 1 1 0 0 1 0 0 0 0 0 0 12 0 1130.6118 Q5VYK3 Q5VYK3 1545 1556 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0032891 107.11 By MS/MS 2.5 0.5 1 1 2 615530 615530 0 1373 1657 1422 3507;3508 2512 2512 1201 1 21956 0 AQGGNLNYSAR SLSLLSVVLLYLVNRAQGGNLNYSARQREE LVNRAQGGNLNYSARQREEIKFSHTE____ R A Q A R Q 2 1 2 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 1149.5527 Q9H3U5 Q9H3U5 444 454 MFSD1 Major facilitator superfamily domain-containing protein 1 yes yes 2 0.0041307 106.88 By MS/MS 1.5 0.5 1 1 2 84931 84931 0 1374 2494 1423 3509;3510 2513;2514 2514 2 4149.6 0 AQGPQQQPGSEGPSYAK APDQAAEIGSRGSTKAQGPQQQPGSEGPSY GPQQQPGSEGPSYAKKVALWLAGLLGAGGT K A Q A K K 2 0 0 0 0 4 1 3 0 0 0 1 0 0 3 2 0 0 1 0 0 0 17 0 1728.8067 Q3ZCQ8 Q3ZCQ8 48 64 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 3.5097E-33 265.77 By MS/MS 8.5 1.12 1 1 1 1 4 22280000 22280000 0 1375 1573 1424 3511;3512;3513;3514 2515;2516;2517 2515 3 915430 0 AQGPQQQPGSEGPSYAKK APDQAAEIGSRGSTKAQGPQQQPGSEGPSY PQQQPGSEGPSYAKKVALWLAGLLGAGGTV K A Q K K V 2 0 0 0 0 4 1 3 0 0 0 2 0 0 3 2 0 0 1 0 0 0 18 1 1856.9017 Q3ZCQ8 Q3ZCQ8 48 65 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 3 0.0094441 78.441 By MS/MS 8 0.816 1 1 1 3 5263600 5263600 0 1376 1573 1425 3515;3516;3517 2518 2518 1 267980 0 AQHQLGEFK MRCGDLLAASQVVNRAQHQLGEFKTWFQEY SQVVNRAQHQLGEFKTWFQEYMNSKDRRLS R A Q F K T 1 0 0 0 0 2 1 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1056.5352 Q8N1F7 Q8N1F7 341 349 NUP93 Nuclear pore complex protein Nup93 yes yes 3 0.0043603 106.2 By MS/MS 5 0.816 1 1 1 3 1178200 1178200 0 1377 1898 1426 3518;3519;3520 2519 2519 1 37032 0 AQIAGYLYGVSPPDNPQVK PKNVLKKFICISDLRAQIAGYLYGVSPPDN GYLYGVSPPDNPQVKEIRCIVMVPQWGTHQ R A Q V K E 2 0 1 1 0 2 0 2 0 1 1 1 0 0 3 1 0 0 2 2 0 0 19 0 2016.0316 Q6P2Q9 Q6P2Q9 2122 2140 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 8.0854E-05 127.32 By MS/MS 2.5 0.5 1 1 2 558370 558370 0 1378 1706 1427 3521;3522 2520 2520 1 22602 0 AQIDNLTR HQLTMQKEEDTSGYRAQIDNLTRENRSLSE EDTSGYRAQIDNLTRENRSLSEEIKRLKNT R A Q T R E 1 1 1 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 8 0 929.49304 P15924 P15924 1393 1400 DSP Desmoplakin yes yes 2 0.0070591 129.42 By MS/MS By matching 1.5 0.5 1 1 1 1 308340 210020 98323 1379 603 1428 3523;3524 2521 2521 1 10439 98323 AQIGTVLPSLIDR DILSALVTRLQDRFKAQIGTVLPSLIDRLG FKAQIGTVLPSLIDRLGDAKDSVREQDQTL K A Q D R L 1 1 0 1 0 1 0 1 0 2 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1381.7929 Q7Z460 Q7Z460 87 99 CLASP1 CLIP-associating protein 1 yes yes 2 2.8728E-05 166.29 By MS/MS 3 0 1 1 472030 472030 0 1380 1790 1429 3525 2522 2522 1 12322 0 AQIHDLVLVGGSTR LEPVEKALRDAKLDKAQIHDLVLVGGSTRI KAQIHDLVLVGGSTRIPKVQKLLQDFFNGR K A Q T R I 1 1 0 1 0 1 0 2 1 1 2 0 0 0 0 1 1 0 0 2 0 0 14 0 1464.8049 P0DMV9;P0DMV8 P0DMV9 329 342 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 2.043E-05 159.66 By MS/MS 5.33 0.471 2 1 3 23898000 23898000 0 1381 528 1430 3526;3527;3528 2523;2524 2524 2 906070 0 AQIMGFMPVTYK LCGKKQKEITKAIKRAQIMGFMPVTYKDPA IKRAQIMGFMPVTYKDPAYLKDPKVCNIRY R A Q Y K D 1 0 0 0 0 1 0 1 0 1 0 1 2 1 1 0 1 0 1 1 0 0 12 0 1384.6883 Q9Y3D5 Q9Y3D5 114 125 MRPS18C 28S ribosomal protein S18c, mitochondrial yes yes 2 0.00092518 111.86 By MS/MS 10 0 1 1 286670 286670 0 1382 2931 1431 3529 2525 2525 1686;1687 1 304700 0 AQIWDTAGQER EFATRSIQVDGKTIKAQIWDTAGQERYRAI KTIKAQIWDTAGQERYRAITSAYYRGAVGA K A Q E R Y 2 1 0 1 0 2 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 11 0 1273.6051 P62491;Q15907 P62491 62 72 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 1.1961E-07 212.28 By MS/MS 9 0 1 1 1579400 1579400 0 1383 1136 1432 3530 2526 2526 1 906430 0 AQKGELLER GFRRLGTECFLAQMRAQKGELLERLSSARN FLAQMRAQKGELLERLSSARNFSNMDDEEN R A Q E R L 1 1 0 0 0 1 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1042.5771 O43264 O43264 595 603 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 3 0.033318 87.149 By MS/MS By matching 4.33 0.471 2 1 2 1 1893200 1877100 16127 1384 189 1433 3531;3532;3533 2527 2527 1 54109 33699 AQLDAISEKVDVIAKR SPVYSYLWTRPAVGRAQLDAISEKVDVIAK QLDAISEKVDVIAKRVLGLLERSSMSLTQD R A Q K R V 3 1 0 2 0 1 1 0 0 2 1 2 0 0 0 1 0 0 0 2 0 0 16 2 1754.989 Q5JPH6 Q5JPH6 433 448 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 3;4 0.011859 81.526 By MS/MS 6 0 2 2 15759000 15759000 0 1385 1604 1434 3534;3535 2528;2529 2528 2 122890 0 AQLGGPELQR VGDPVLRGVAAPVERAQLGGPELQRLTQRL APVERAQLGGPELQRLTQRLVQVMRRRRCV R A Q Q R L 1 1 0 0 0 2 1 2 0 0 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1067.5724 Q9HBH1 Q9HBH1 85 94 PDF Peptide deformylase, mitochondrial yes yes 2 0.00088309 128.28 By MS/MS 9 0.816 1 1 1 3 2233400 2233400 0 1386 2551 1435 3536;3537;3538 2530 2530 1 1265100 0 AQLGVQAFADALLIIPK MAEALIKHKPSVKGRAQLGVQAFADALLII LGVQAFADALLIIPKVLAQNSGFDLQETLV R A Q P K V 4 0 0 1 0 2 0 1 0 2 3 1 0 1 1 0 0 0 0 1 0 0 17 0 1767.0295 P40227 P40227 433 449 CCT6A T-complex protein 1 subunit zeta yes yes 2 4.1617E-05 137.62 By MS/MS 6 0 1 1 319040 319040 0 1387 828 1436 3539 2531 2531 1 2487.9 0 AQLLQPTLEINPR HFLRMQQLAKTQEERAQLLQPTLEINPRHA ERAQLLQPTLEINPRHALIKKLNQLRASEP R A Q P R H 1 1 1 0 0 2 1 0 0 1 3 0 0 0 2 0 1 0 0 0 0 0 13 0 1491.8409 Q12931 Q12931 635 647 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.00027787 158.08 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 24128000 24128000 0 1388 1316 1437 3540;3541;3542;3543;3544;3545;3546;3547 2532 2532 1 1083700 0 AQLVLVGATFPEGVGQLLNK IAEGPADLEDPFNPKAQLVLVGATFPEGVG VGATFPEGVGQLLNKVASPDAVTTITSSKL K A Q N K V 2 0 1 0 0 2 1 3 0 0 4 1 0 1 1 0 1 0 0 3 0 0 20 0 2053.1572 Q9NUL7 Q9NUL7 324 343 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 1.2519E-50 266.77 By MS/MS 6 0 1 1 516910 516910 0 1389 2638 1438 3548 2533 2533 1 4030.9 0 AQNAESSLQQK QLEEVKAINLQMFHKAQNAESSLQQKNEAI MFHKAQNAESSLQQKNEAITSFEGKTNQVM K A Q Q K N 2 0 1 0 0 3 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 11 0 1202.5891 Q96T51 Q96T51 470 480 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 6.7373E-07 183.72 By MS/MS 5 0.816 1 1 1 3 1358000 1358000 0 1390 2259 1439 3549;3550;3551 2534 2534 1 40772 0 AQNDLIWNIK KKEKDKDSKLEKALKAQNDLIWNIKDELKK EKALKAQNDLIWNIKDELKKVCSTNDLKEL K A Q I K D 1 0 2 1 0 1 0 0 0 2 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1213.6455 P09874 P09874 240 249 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 2.0518E-09 195.57 By MS/MS 4 0 1 1 450940 450940 0 1391 521 1440 3552 2535 2535 1 12310 0 AQNEEILYVLR GTRTFSAFHKVLSEKAQNEEILYVLRHYIQ LSEKAQNEEILYVLRHYIQKPSSRKMYLSG K A Q L R H 1 1 1 0 0 1 2 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 11 0 1346.7194 Q9NYU1 Q9NYU1 206 216 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 4.3148E-07 187.99 By MS/MS 3 0 1 1 902080 902080 0 1392 2698 1441 3553 2536 2536 1 23549 0 AQNISSNANMLR PSAAPIKQVEEKPQRAQNISSNANMLRKGP PQRAQNISSNANMLRKGPAEDMSSKLNQAR R A Q L R K 2 1 3 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 12 0 1317.6459 Q14008 Q14008 1442 1453 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 5.6996E-11 199.33 By MS/MS By matching 2 0 3 2 1 1670400 1656200 14166 1393 1405 1442;1443 3554;3555;3556 2537;2538 2537 1076 2 82323 11926 AQNLKDLAGR ______________________________ ______________________________ M A Q G R L 2 1 1 1 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 1 1084.5989 Q99623 Q99623 2 11 PHB2 Prohibitin-2 yes yes 2 0.0024463 128.86 By MS/MS By matching 8 0 2 1 1 14138000 13835000 302920 1394 2277 1444 3557;3558 2539 2539 1 912700 2584300 AQPAQPADEPAEKADEPMEH VSPFLEGLEERPQRKAQPAQPADEPAEKAD PADEPAEKADEPMEH_______________ K A Q E H - 5 0 0 2 0 2 4 0 1 0 0 1 1 0 4 0 0 0 0 0 0 0 20 1 2159.943 P25786 P25786 244 263 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.0021388 115.83 By MS/MS 8 0 1 1 345640 345640 0 1395 688 1445 3559 2540 2540 1 22801 0 AQPLSLEELLAK SKKDEEDEHGDKKPKAQPLSLEELLAKKKA KPKAQPLSLEELLAKKKAEEEAEAKPKFLS K A Q A K K 2 0 0 0 0 1 2 0 0 0 4 1 0 0 1 1 0 0 0 0 0 0 12 0 1310.7446 Q9BUQ8 Q9BUQ8 139 150 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.01329 93.345 By MS/MS 4 0.816 1 1 1 3 990700 990700 0 1396 2366 1446 3560;3561;3562 2541 2541 1 28110 0 AQPSSASYQPVPADPFAIVSR QPQQQPGEAYSAMPRAQPSSASYQPVPADP SYQPVPADPFAIVSRAQQMVEILSDENRNL R A Q S R A 4 1 0 1 0 2 0 0 0 1 0 0 0 1 4 4 0 0 1 2 0 0 21 0 2187.096 Q4VCS5 Q4VCS5 413 433 AMOT Angiomotin yes yes 2 0.00071108 130.64 By MS/MS 4 0.816 1 1 1 3 943790 943790 0 1397 1580 1447 3563;3564;3565 2542 2542 1 26203 0 AQQATPGGAAPTIFSR VRGAAGVTDGNEVAKAQQATPGGAAPTIFS QQATPGGAAPTIFSRILDKSLPADILYEDQ K A Q S R I 4 1 0 0 0 2 0 2 0 1 0 0 0 1 2 1 2 0 0 0 0 0 16 0 1571.8056 Q9BX68 Q9BX68 43 58 HINT2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 2 0.00366 123.76 By MS/MS 10 0 1 1 699610 699610 0 1398 2399 1448 3566 2543 2543 1 743610 0 AQQEDALAQQAFEEAR QRLDGMGCLEFDEERAQQEDALAQQAFEEA QQEDALAQQAFEEARRRTREFEDRDRSHRE R A Q A R R 5 1 0 1 0 4 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 16 0 1803.8388 Q13951 Q13951 132 147 CBFB Core-binding factor subunit beta yes yes 2 1.1624E-20 214.58 By MS/MS 9.5 0.5 1 1 2 3786400 3786400 0 1399 1404 1449 3567;3568 2544;2545 2544 2 2224400 0 AQQEFAAGVFSNPAVR RIHSLYRRTGASFQKAQQEFAAGVFSNPAV QQEFAAGVFSNPAVRTAAANAAAGAAENAF K A Q V R T 4 1 1 0 0 2 1 1 0 0 0 0 0 2 1 1 0 0 0 2 0 0 16 0 1690.8427 O14828 O14828 314 329 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 1.327E-16 249.33 By MS/MS 5.62 2.91 1 1 1 2 2 1 8 10517000 10517000 0 1400 130 1450 3569;3570;3571;3572;3573;3574;3575;3576 2546;2547;2548;2549 2547 4 888440 0 AQQGIVFLDEVDK VIAKLLQDANYNVEKAQQGIVFLDEVDKIG EKAQQGIVFLDEVDKIGSVPGIHQLRDVGG K A Q D K I 1 0 0 2 0 2 1 1 0 1 1 1 0 1 0 0 0 0 0 2 0 0 13 0 1460.7511 O76031 O76031 350 362 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.0016581 123.26 By MS/MS 5 0 1 1 1461900 1461900 0 1401 344 1451 3577 2550;2551 2551 2 60090 0 AQQLHKEQQK GVDKDEAKAEVLKNRAQQLHKEQQKGVQPL VLKNRAQQLHKEQQKGVQPLTFG_______ R A Q Q K G 1 0 0 0 0 4 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1236.6575 Q96BR5 Q96BR5 214 223 COA7 Cytochrome c oxidase assembly factor 7 yes yes 2 0.0026935 150.27 By MS/MS 9 0 1 1 41041 41041 0 1402 2132 1452 3578 2552 2552 1 23554 0 AQQNLSWEEIAK YVQSQHQRKQKRQLRAQQNLSWEEIAKEYQ QLRAQQNLSWEEIAKEYQNEEDSLGGSRVV R A Q A K E 2 0 1 0 0 2 2 0 0 1 1 1 0 0 0 1 0 1 0 0 0 0 12 0 1415.7045 Q5HYK3 Q5HYK3 142 153 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.00087419 134.75 By MS/MS 8 0 1 1 1218800 1218800 0 1403 1602 1453 3579 2553 2553 1 80401 0 AQQNPTLLAELR LRLEHEQASQPTPEKAQQNPTLLAELRLLR PEKAQQNPTLLAELRLLRQRKDELEQRMSA K A Q L R L 2 1 1 0 0 2 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 12 0 1352.7412 Q9Y4J8;O60941 Q9Y4J8 508 519 DTNA;DTNB Dystrobrevin alpha;Dystrobrevin beta yes no 2 0.0044299 108.98 By MS/MS 5 0 1 1 434950 434950 0 1404 2954 1454 3580 2554 2554 1 17878 0 AQQPQQPSQEK ARLRQAGSAAPRPPRAQQPQQPSQEKFYSM RPPRAQQPQQPSQEKFYSMAAQIKLLLEIP R A Q E K F 1 0 0 0 0 5 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 11 0 1267.6157 Q8WTW3 Q8WTW3 103 113 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.014074 94.692 By MS/MS 4.5 0.5 1 1 2 239800 239800 0 1405 2010 1455 3581;3582 2555 2555 1 7088 0 AQQQDKPPR GMEDGERPRRRRHGRAQQQDKPPRFRRLKQ RRRHGRAQQQDKPPRFRRLKQERENAARGS R A Q P R F 1 1 0 1 0 3 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 9 1 1066.552 P48634 P48634 1248 1256 PRRC2A Protein PRRC2A yes yes 2 0.0037823 153.08 By MS/MS 2 0 1 1 145170 145170 0 1406 907 1456 3583 2556 2556 1 7215.9 0 AQQQLAFLEGR SAPTAKAPPKATSTRAQQQLAFLEGRKKQL TSTRAQQQLAFLEGRKKQLLQAALRAKQKN R A Q G R K 2 1 0 0 0 3 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1259.6622 Q6P1N0 Q6P1N0 490 500 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.0010994 132.32 By MS/MS 4.5 0.5 1 1 2 1208900 1208900 0 1407 1702 1457 3584;3585 2557 2557 1 36438 0 AQQQLNSK QELRELRFLQKEEQRAQQQLNSKLQQQREQ LQKEEQRAQQQLNSKLQQQREQIFRRFEQE R A Q S K L 1 0 1 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 915.47739 Q9H2G2 Q9H2G2 844 851 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0080258 125.81 By MS/MS By matching 2 0 2 1 1 259490 254960 4528.5 1408 2476 1458 3586;3587 2558 2558 1 12673 3812.5 AQQVSQGLDVLTAK LRARGQGSSPVAMQKAQQVSQGLDVLTAKV KAQQVSQGLDVLTAKVENAARKLEAMTNSK K A Q A K V 2 0 0 1 0 3 0 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 0 1456.7886 P18206 P18206 353 366 VCL Vinculin yes yes 2 2.9324E-06 212.1 By MS/MS 4 0 1 1 1802000 1802000 0 1409 623 1459 3588 2559;2560 2560 2 49193 0 AQREEEARR ERIERVKKAREEHERAQREEEARRQSGAQY REEHERAQREEEARRQSGAQYGSFPGGFPG R A Q R R Q 2 3 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 1143.5745 P50502;Q8NFI4 P50502 264 272 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 2 0.019349 126.24 By MS/MS 6 0 1 1 1394200 1394200 0 1410 948 1460 3589 2561 2561 1 10872 0 AQSCPTFLCALPR YAVIPAEKFDLIWNRAQSCPTFLCALPRRE NRAQSCPTFLCALPRREGYEFFVGQWTGTE R A Q P R R 2 1 0 0 2 1 0 0 0 0 2 0 0 1 2 1 1 0 0 0 0 0 13 0 1519.7276 Q5TC12 Q5TC12 191 203 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 yes yes 2 9.9752E-12 202.65 By MS/MS 8 0 1 1 741670 741670 0 1411 1637 1461 3590 2562 2562 1 48928 0 AQSELAAHQK GLKSKTHAVLVALKRAQSELAAHQKKILHV VALKRAQSELAAHQKKILHVDNHIGISIAG R A Q Q K K 3 0 0 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1081.5516 P25786 P25786 52 61 PSMA1 Proteasome subunit alpha type-1 yes yes 2 4.3839E-16 228.31 By MS/MS 8 0 1 1 2172700 2172700 0 1412 688 1462 3591 2563 2563 1 143330 0 AQSELAAHQKK GLKSKTHAVLVALKRAQSELAAHQKKILHV ALKRAQSELAAHQKKILHVDNHIGISIAGL R A Q K K I 3 0 0 0 0 2 1 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 11 1 1209.6466 P25786 P25786 52 62 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.0058925 131.12 By MS/MS 8 0 1 1 614770 614770 0 1413 688 1463 3592 2564 2564 1 40556 0 AQSQLLVPEQK EHCLKFLSAVLAAQKAQSQLLVPEQKDSSS AAQKAQSQLLVPEQKDSSSWYQKLDTKDKP K A Q Q K D 1 0 0 0 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 11 0 1239.6823 Q01968 Q01968 117 127 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.0048243 108.47 By MS/MS 4 0 1 1 1220200 1220200 0 1414 1248 1464 3593 2565 2565 1 33311 0 AQTAPNKDVQR ESLKKCLSVMEAKVKAQTAPNKDVQREIAD AKVKAQTAPNKDVQREIADLGEALATAVIP K A Q Q R E 2 1 1 1 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 11 1 1226.6367 P49588 P49588 783 793 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.010774 127.51 By MS/MS 4 0 1 1 541840 541840 0 1415 921 1465 3594 2566 2566 1 14792 0 AQTASLFYNCEGK LDKLQVERERGITVKAQTASLFYNCEGKQY VKAQTASLFYNCEGKQYLLNLIDTPGHVDF K A Q G K Q 2 0 1 0 1 1 1 1 0 0 1 1 0 1 0 1 1 0 1 0 0 0 13 0 1487.6715 Q8N442 Q8N442 120 132 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.00094649 132.03 By MS/MS 5 0 1 1 1670100 1670100 0 1416 1913 1466 3595 2567 2567 1 68649 0 AQTEGINISEEALNHLGEIGTK MLYTPQEMKQIIKIRAQTEGINISEEALNH ISEEALNHLGEIGTKTTLRYSVQLLTPANL R A Q T K T 2 0 2 0 0 1 4 3 1 3 2 1 0 0 0 1 2 0 0 0 0 0 22 0 2323.1656 Q9Y265 Q9Y265 379 400 RUVBL1 RuvB-like 1 yes yes 2;3 2.8974E-41 240.5 By MS/MS 6 0 2 2 83178000 83178000 0 1417 2870 1467 3596;3597 2568;2569 2569 2 648630 0 AQTEWNTGTWR KVHRIYRGAGGSFQKAQTEWNTGTWRNPPS SFQKAQTEWNTGTWRNPPSREAQYNNFSGN K A Q W R N 1 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 3 2 0 0 0 0 11 0 1348.616 Q969E2 Q969E2 186 196 SCAMP4 Secretory carrier-associated membrane protein 4 yes yes 2 5.3998E-16 256.48 By MS/MS 2 0.816 1 1 1 3 747990 747990 0 1418 2101 1468 3598;3599;3600 2570 2570 1 31327 0 AQTGSGGADPTTDVSGQS LTGSKMKLLNLYIKRAQTGSGGADPTTDVS GSGGADPTTDVSGQS_______________ R A Q Q S - 2 0 0 2 0 2 0 4 0 0 0 0 0 0 1 3 3 0 0 1 0 0 18 0 1634.702 O75122 O75122 1277 1294 CLASP2 CLIP-associating protein 2 yes yes 2 4.0983E-19 209.79 By MS/MS 3 0 1 1 396520 396520 0 1419 279 1469 3601 2571 2571 1 10351 0 AQTTNSNSSSSSDVSTHS LTGSKMKLLNLYIKRAQTTNSNSSSSSDVS TNSNSSSSSDVSTHS_______________ R A Q H S - 1 0 2 1 0 1 0 0 1 0 0 0 0 0 0 8 3 0 0 1 0 0 18 0 1795.7456 Q7Z460 Q7Z460 1521 1538 CLASP1 CLIP-associating protein 1 yes yes 2 0.0012798 115.37 By MS/MS 3 0 1 1 180590 180590 0 1420 1790 1470 3602 2572 2572 1 4714.3 0 AQVADAFLSK KTTKLQSESQKLEIRAQVADAFLSKFQLTS KLEIRAQVADAFLSKFQLTSDEMSLLRGTR R A Q S K F 3 0 0 1 0 1 0 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1048.5553 Q9Y2V7 Q9Y2V7 150 159 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.033126 97.472 By MS/MS 5 0 1 1 1460700 1460700 0 1421 2903 1471 3603 2573 2573 1 60042 0 AQVADVVVSR DPATHRQKLYTLQDKAQVADVVVSRWLRVT TLQDKAQVADVVVSRWLRVTVAGGVHISGL K A Q S R W 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 10 0 1042.5771 P49327 P49327 1073 1082 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00010861 164.66 By MS/MS By matching 3.75 1.98 1 2 1 1 1 1 1 7 1 43678000 43661000 17137 1422 915 1472 3604;3605;3606;3607;3608;3609;3610;3611 2574;2575;2576;2577 2575 4 1695400 14427 AQVAMSTLPVEDEESSESR ______________________________ MSTLPVEDEESSESRMVVTFLMSALESMCK M A Q S R M 2 1 0 1 0 1 4 0 0 0 1 0 1 0 1 4 1 0 0 2 0 0 19 0 2063.9317 P78347 P78347 2 20 GTF2I General transcription factor II-I yes yes 2 3.2993E-05 122.52 By MS/MS 3 0 2 2 2486300 2486300 0 1423 1194 1473;1474 3612;3613 2578;2579 2578 939 2 64905 0 AQVCLISSSK LLTMLAMLLKVAMNRAQVCLISSSKSGERH VAMNRAQVCLISSSKSGERHLYLIKVSRDK R A Q S K S 1 0 0 0 1 1 0 0 0 1 1 1 0 0 0 3 0 0 0 1 0 0 10 0 1091.5645 Q9Y5Q9 Q9Y5Q9 571 580 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 0.0060935 103.88 By MS/MS 4 0 1 1 580360 580360 0 1424 2978 1475 3614 2580 2580 1 15843 0 AQVIYTR ELLSKGLIKLVSKHRAQVIYTRNTKGGDAP IKLVSKHRAQVIYTRNTKGGDAPAAGEDA_ R A Q T R N 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 7 0 849.47085 P62851 P62851 105 111 RPS25 40S ribosomal protein S25 yes yes 2 0.040215 107.9 By MS/MS By matching 9.33 0.471 2 1 2 1 10045000 9992200 52604 1425 1150 1476 3615;3616;3617 2581 2581 1 9507100 566920 AQVLAGGR YAIAKKLGSKDVVIKAQVLAGGRGKGTFES SKDVVIKAQVLAGGRGKGTFESGLKGGVKI K A Q G R G 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 770.43989 Q9P2R7 Q9P2R7 99 106 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.0058824 133.81 By MS/MS 7.5 0.5 1 1 2 8273900 8273900 0 1426 2741 1477 3618;3619 2582 2582 1 172040 0 AQVSLLIR SVVAKFNASQLITQRAQVSLLIRRELTERA SQLITQRAQVSLLIRRELTERAKDFSLILD R A Q I R R 1 1 0 0 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 8 0 898.56 Q99623 Q99623 158 165 PHB2 Prohibitin-2 yes yes 2 0.0079109 139.97 By MS/MS 8.5 0.5 1 1 2 4869500 4869500 0 1427 2277 1478 3620;3621 2583 2583 1 387810 0 AQVTSLLGELQESQSR KRCQQQMAEDKASVKAQVTSLLGELQESQS QVTSLLGELQESQSRLEAATKECQALEGRA K A Q S R L 1 1 0 0 0 3 2 1 0 0 3 0 0 0 0 3 1 0 0 1 0 0 16 0 1744.8955 Q9Y6K9 Q9Y6K9 144 159 IKBKG NF-kappa-B essential modulator yes yes 2 1.5748E-21 230.69 By MS/MS 6.5 0.5 1 1 2 2507600 2507600 0 1428 3009 1479 3622;3623 2584 2584 1 26770 0 AQWNQLQQLDTR ______________________________ ______________________________ M A Q T R Y 1 1 1 1 0 4 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 12 0 1499.7481 P40763 P40763 2 13 STAT3 Signal transducer and activator of transcription 3 yes yes 2 1.4388E-83 336.37 By MS/MS 5 0 1 1 443040 443040 0 1429 831 1480 3624 2585 2585 1 18211 0 AQYDPAKPNYISLDK FKVKERHLFLTYLGRAQYDPAKPNYISLDK AQYDPAKPNYISLDKLVSIPDEIFCEEIAK R A Q D K L 2 0 1 2 0 1 0 0 0 1 1 2 0 0 2 1 0 0 2 0 0 0 15 1 1721.8625 Q96E29 Q96E29 375 389 MTERF3 Transcription termination factor 3, mitochondrial yes yes 3 0.022323 67.115 By MS/MS 6.5 0.5 1 1 2 2852400 2852400 0 1430 2158 1481 3625;3626 2586 2586 1 45741 0 AQYEDIAQK NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE IIAEVKAQYEDIAQKSKAEAESLYQSKYEE K A Q Q K S 2 0 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1064.5138 P04264 P04264 356 364 KRT1 Keratin, type II cytoskeletal 1 yes yes 2 7.4942E-05 172.25 By MS/MS By MS/MS 5.47 2.83 2 1 1 2 1 2 2 1 2 1 8 7 119500000 73547000 45954000 1431 450 1482 3627;3628;3629;3630;3631;3632;3633;3634;3635;3636;3637;3638;3639;3640;3641 2587;2588;2589;2590;2591;2592;2593;2594;2595;2596;2597;2598;2599;2600 2591 14 16563000 112510000 AQYEDIAQKSK NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE AEVKAQYEDIAQKSKAEAESLYQSKYEELQ K A Q S K A 2 0 0 1 0 2 1 0 0 1 0 2 0 0 0 1 0 0 1 0 0 0 11 1 1279.6408 P04264 P04264 356 366 KRT1 Keratin, type II cytoskeletal 1 yes yes 2 0.00087258 159.09 By MS/MS 5 1.41 1 1 1 1 1 5 231590 0 231590 1432 450 1483 3642;3643;3644;3645;3646 2601 2601 1 0 468640 AQYEEIANR NNRNLDLDSIIAEVKAQYEEIANRSRTEAE IIAEVKAQYEEIANRSRTEAESWYQTKYEE K A Q N R S 2 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1092.52 CON__P13647;P13647 CON__P13647 344 352 KRT5 Keratin, type II cytoskeletal 5 yes no 2 3.9385E-06 181.55 By MS/MS By MS/MS 5.69 2.97 1 1 2 1 2 1 1 2 2 4 9 10740000 4572300 6167300 + 1433 50 1484 3647;3648;3649;3650;3651;3652;3653;3654;3655;3656;3657;3658;3659 2602;2603;2604;2605;2606;2607;2608;2609;2610;2611;2612;2613;2614 2604 13 1130600 15305000 AQYEEIAQR NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE IIAEVKAQYEEIAQRSKEEAEALYHSKYEE K A Q Q R S 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1106.5356 CON__P35908v2;CON__P35908;P35908;CON__P19013;P19013;CON__P02538;P02538;CON__P48668;P48668;P04259;CON__ENSEMBL:ENSBTAP00000038253 CON__P35908v2 354 362 KRT2;KRT4;KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.0006963 148.94 By MS/MS By MS/MS 5.59 2.97 2 1 2 2 2 1 1 2 2 2 8 9 44127000 25850000 18277000 + 1434 52;36;53;449;32 1485 3660;3661;3662;3663;3664;3665;3666;3667;3668;3669;3670;3671;3672;3673;3674;3675;3676 2615;2616;2617;2618;2619;2620;2621;2622;2623;2624;2625;2626;2627;2628;2629 2621 15 4376500 61363000 AQYYLPDGSTIEIGPSR LSINPQKDETLETEKAQYYLPDGSTIEIGP YYLPDGSTIEIGPSRFRAPELLFRPDLIGE K A Q S R F 1 1 0 1 0 1 1 2 0 2 1 0 0 0 2 2 1 0 2 0 0 0 17 0 1865.9159 P61163 P61163 239 255 ACTR1A Alpha-centractin yes yes 2 0.0058504 102.33 By MS/MS 7 0 1 1 443170 443170 0 1435 1090 1486 3677 2630 2630 1 7919.5 0 ARAEEAAGQLR LLRLGARVIMGCRDRARAEEAAGQLRRELR CRDRARAEEAAGQLRRELRQAAECGPEPGV R A R L R R 4 2 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 1 1170.6105 Q9HBH5 Q9HBH5 78 88 RDH14 Retinol dehydrogenase 14 yes yes 2 0.001812 153.1 By MS/MS 8 0 1 1 452500 452500 0 1436 2552 1487 3678 2631 2631 1 29852 0 ARAEEAAGQLRR LLRLGARVIMGCRDRARAEEAAGQLRRELR RDRARAEEAAGQLRRELRQAAECGPEPGVS R A R R R E 4 3 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 12 2 1326.7116 Q9HBH5 Q9HBH5 78 89 RDH14 Retinol dehydrogenase 14 yes yes 3 0.0092489 103.43 By MS/MS 8 0 1 1 1041100 1041100 0 1437 2552 1488 3679 2632 2632 1 68684 0 ARDAAGSGDKPGADTGR LTALEMLTAFASHIRARDAAGSGDKPGADT DAAGSGDKPGADTGR_______________ R A R G R - 4 2 0 3 0 0 0 4 0 0 0 1 0 0 1 1 1 0 0 0 0 0 17 2 1600.7554 Q96EL3 Q96EL3 96 112 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 3 0.008657 79.332 By MS/MS 10 0 1 1 250050 250050 0 1438 2163 1489 3680 2633 2633 1 265780 0 ARDYDAMGSQTK KATGKISKLGRSFTRARDYDAMGSQTKFVQ FTRARDYDAMGSQTKFVQCPDGELQKRKEV R A R T K F 2 1 0 2 0 1 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 0 12 1 1341.5983 Q9Y230 Q9Y230 212 223 RUVBL2 RuvB-like 2 yes yes 2 0.0058151 110.64 By MS/MS 6 0 1 1 0 0 0 1439 2864 1490 3681 2634 2634 1 0 0 AREEHER REEREIKERIERVKKAREEHERAQREEEAR ERIERVKKAREEHERAQREEEARRQSGAQY K A R E R A 1 2 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 925.43659 P50502 P50502 257 263 ST13 Hsc70-interacting protein yes yes 3 0.043453 93.143 By MS/MS 6 0 1 1 252590 252590 0 1440 948 1491 3682 2635 2635 1 1969.7 0 AREEHTVPER NINDALLRGISMLNKAREEHTVPERSTSII SMLNKAREEHTVPERSTSIIIMLTDGDANV K A R E R S 1 2 0 0 0 0 3 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 10 1 1222.6054 CON__Q0V8M9 CON__Q0V8M9 376 385 yes yes 3 0.015424 72.652 By MS/MS 8 0 1 1 248690 248690 0 + 1441 55 1492 3683 2636 2636 1 16406 0 ARETGGAEGTGDAVLGEK GYPVVPAEKRSSGERARETGGAEGTGDAVL TGGAEGTGDAVLGEKVLEEALLSREHVLEL R A R E K V 3 1 0 1 0 0 3 5 0 0 1 1 0 0 0 0 2 0 0 1 0 0 18 1 1716.8279 Q92667 Q92667 196 213 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 3 0.04973 54.171 By MS/MS 3 0 1 1 575560 575560 0 1442 2074 1493 3684 2637 2637 1 15025 0 AREVLLASQK HPMMITNAERLRRKRAREVLLASQKTDAEA LRRKRAREVLLASQKTDAEATDTEATET__ R A R Q K T 2 1 0 0 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 1 1113.6506 Q9Y3D3 Q9Y3D3 115 124 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.043757 104.43 By MS/MS 10 0 1 1 937150 937150 0 1443 2930 1494 3685 2638 2638 1 996090 0 AREVLLASQKTDAEATDTEATET HPMMITNAERLRRKRAREVLLASQKTDAEA QKTDAEATDTEATET_______________ R A R E T - 5 1 0 2 0 1 4 0 0 0 2 1 0 0 0 1 5 0 0 1 0 0 23 2 2449.182 Q9Y3D3 Q9Y3D3 115 137 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 3 0.00011542 93.92 By MS/MS 10 0 1 1 541770 541770 0 1444 2930 1495 3686 2639 2639 1 575840 0 ARFEELCSDLFR DSLFEGIDFYTSITRARFEELCSDLFRSTL ITRARFEELCSDLFRSTLEPVEKALRDAKL R A R F R S 1 2 0 1 1 0 2 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 12 1 1541.7297 P0DMV9;P0DMV8;P17066;P48741 P0DMV9 300 311 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2;3 3.9929E-05 175.74 By MS/MS 5.8 0.748 2 2 1 5 14554000 14554000 0 1445 528;611 1496 3687;3688;3689;3690;3691 2640;2641;2642;2643 2641 4 319480 0 ARFEELNADLFR DSLYEGIDFYTSITRARFEELNADLFRGTL ITRARFEELNADLFRGTLDPVEKALRDAKL R A R F R G 2 2 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 12 1 1479.747 P11142;P54652 P11142 300 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 9.3935E-05 167.11 By MS/MS 6.5 1.12 2 2 2 2 8 58296000 58296000 0 1446 546 1497 3692;3693;3694;3695;3696;3697;3698;3699 2644;2645;2646;2647;2648 2644 5 1877000 0 ARHEVLLISAEQDKR SNQIKITGTKEGIEKARHEVLLISAEQDKR ARHEVLLISAEQDKRAVERLEVEKAFHPFI K A R K R A 2 2 0 1 0 1 2 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 15 2 1763.9642 Q00341 Q00341 208 222 HDLBP Vigilin yes yes 4 0.00014781 127.66 By MS/MS 3.5 0.5 1 1 2 3963800 3963800 0 1447 1231 1498 3700;3701 2649 2649 1 103760 0 ARIVAEEFLK IDKEISEMKLSVNARARIVAEEFLKNF___ SVNARARIVAEEFLKNF_____________ R A R L K N 2 1 0 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 1 1174.671 P59998 P59998 157 166 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.032447 109.44 By MS/MS 9 0 1 1 424670 424670 0 1448 1062 1499 3702 2650 2650 1 243720 0 ARKENLER DHFLRLEREKRARIKARKENLERKKAKILL EKRARIKARKENLERKKAKILLKKFPHLAE K A R E R K 1 2 1 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1014.557 Q9HD33 Q9HD33 221 228 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 3 0.0089565 115.7 By MS/MS By matching 8.5 0.5 1 1 1 1 174310 169760 4550.7 1449 2567 1500 3703;3704 2651 2651 1 97428 38823 ARLEVENQAK SGIEVIENDLLFIARARLEVENQAKRLLEQ LFIARARLEVENQAKRLLEQGLETQNPTQV R A R A K R 2 1 1 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1156.62 Q9UP83 Q9UP83 235 244 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.0056131 133.99 By MS/MS 4 0 1 1 449080 449080 0 1450 2850 1501 3705 2652 2652 1 12259 0 ARLPPDVLR RLLPAELPAKRVRGKARLPPDVLRWVELAK KRVRGKARLPPDVLRWVELAKLYRSIGEYD K A R L R W 1 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 1 0 0 9 1 1035.6189 P78527 P78527 2914 2922 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0562 64.841 By MS/MS 1 0 1 1 140720 140720 0 1451 1197 1502 3706 2653 2653 1 6875.2 0 ARPATDSFDDYPPR RDRNRDSDKTDTDWRARPATDSFDDYPPRR RARPATDSFDDYPPRRGDDSFGDKYRDRYD R A R P R R 2 2 0 3 0 0 0 0 0 0 0 0 0 1 3 1 1 0 1 0 0 0 14 1 1606.7376 P23588 P23588 201 214 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.042796 58.32 By MS/MS 5 0 1 1 0 0 0 1452 672 1503 3707 2654 2654 1 0 0 ARPDDEEGAAVAPGHPLAK ______________________________ DEEGAAVAPGHPLAKGYLPLPRGAPVGKES M A R A K G 5 1 0 2 0 0 2 2 1 0 1 1 0 0 3 0 0 0 0 1 0 0 19 1 1899.9439 Q9Y5Y0 Q9Y5Y0 2 20 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 yes yes 3 0.0085554 69.975 By MS/MS 1 0 2 2 615560 615560 0 1453 2986 1504;1505 3708;3709 2655;2656 2655 2 30075 0 ARPELEELLAK SVKEHTEEDFKGRFKARPELEELLAKLK__ GRFKARPELEELLAKLK_____________ K A R A K L 2 1 0 0 0 0 3 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 11 1 1267.7136 Q96GC5 Q96GC5 200 210 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2;3 0.00017581 180.19 By MS/MS 9 0 2 2 5124600 5124600 0 1454 2179 1506 3710;3711 2657;2658 2657 2 2941100 0 ARPFPDGLAEDIDKGEVSAR CLSKSPNKHNRLYMKARPFPDGLAEDIDKG DGLAEDIDKGEVSARQELKQRARYLAEKYE K A R A R Q 3 2 0 3 0 0 2 2 0 1 1 1 0 1 2 1 0 0 0 1 0 0 20 2 2142.0705 P13639 P13639 606 625 EEF2 Elongation factor 2 yes yes 3;4 2.6342E-06 137.86 By MS/MS 4.67 0.667 4 4 1 9 10393000 10393000 0 1455 576 1507 3712;3713;3714;3715;3716;3717;3718;3719;3720 2659;2660;2661;2662;2663;2664;2665;2666 2663 8 277050 0 ARVECQSHR AFAGLTADARIVINRARVECQSHRLTVEDP RIVINRARVECQSHRLTVEDPVTVEYITRY R A R H R L 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 9 1 1141.5411 O14818 O14818 87 95 PSMA7 Proteasome subunit alpha type-7 yes yes 2;3 0.0022681 136.99 By MS/MS 8 0 2 2 934970 934970 0 1456 129 1508 3721;3722 2667;2668 2667 2 61680 0 ARVEENFLK FRLNREGKQKADKNRARVEENFLKLTHVQR KADKNRARVEENFLKLTHVQRQEAAQSRRE R A R L K L 1 1 1 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 1 1104.5928 Q96A33 Q96A33 411 419 CCDC47 Coiled-coil domain-containing protein 47 yes yes 3 3.7794E-05 166.07 By MS/MS 6 0 1 1 1854500 1854500 0 1457 2114 1509 3723 2669 2669 1 14462 0 ARWTETYVR IFWNDVKDPVSIEERARWTETYVRWSPKGT VSIEERARWTETYVRWSPKGTYLATFHQRG R A R V R W 1 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 9 1 1180.5989 P55884 P55884 333 341 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.020826 120.99 By MS/MS 3.5 0.5 1 1 2 1399500 1399500 0 1458 1040 1510 3724;3725 2670 2670 1 37861 0 ASAAVESFVTK ______________________________ ______________________________ M A S T K Q 3 0 0 0 0 0 1 0 0 0 0 1 0 1 0 2 1 0 0 2 0 0 11 0 1108.5764 P38935 P38935 2 12 IGHMBP2 DNA-binding protein SMUBP-2 yes yes 2 0.0090817 85.533 By MS/MS 4 0 1 1 131450 131450 0 1459 822 1511 3726 2671 2671 1 3588.3 0 ASAELALGENSEVLK DKEYLPIGGLAEFCKASAELALGENSEVLK ASAELALGENSEVLKSGRFVTVQTISGTGA K A S L K S 3 0 1 0 0 0 3 1 0 0 3 1 0 0 0 2 0 0 0 1 0 0 15 0 1529.7937 P00505 P00505 108 122 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 3.3783E-38 256.95 By MS/MS 8 1 1 1 2 4096700 4096700 0 1460 430 1512 3727;3728 2672;2673 2672 2 211840 0 ASAFALQEQPVVNAVIDDTTK KKHNLKLGFMSAFVKASAFALQEQPVVNAV QEQPVVNAVIDDTTKEVVYRDYIDISVAVA K A S T K E 4 0 1 2 0 2 1 0 0 1 1 1 0 1 1 1 2 0 0 3 0 0 21 0 2216.1325 P36957 P36957 287 307 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2;3 1.1703E-08 171.15 By MS/MS 6 0 2 2 7066200 7066200 0 1461 812 1513 3729;3730 2674;2675 2674 2 55102 0 ASAGPQPLLVQSCK TQTIAAAQHAASTPKASAGPQPLLVQSCKA KASAGPQPLLVQSCKAVAEQIPLLVQGVRG K A S C K A 2 0 0 0 1 2 0 1 0 0 2 1 0 0 2 2 0 0 0 1 0 0 14 0 1454.7551 Q9Y490 Q9Y490 944 957 TLN1 Talin-1 yes yes 2 1.0034E-08 193.62 By MS/MS 2.5 0.5 1 1 2 2565300 2565300 0 1462 2947 1514 3731;3732 2676;2677 2676 2 107260 0 ASALEQFVNSVR ______________________________ ______________________________ M A S V R Q 2 1 1 0 0 1 1 0 0 0 1 0 0 1 0 2 0 0 0 2 0 0 12 0 1319.6834 Q9UNS2 Q9UNS2 2 13 COPS3 COP9 signalosome complex subunit 3 yes yes 2 2.8726E-05 189.57 By MS/MS 6.5 0.5 1 1 2 481830 481830 0 1463 2847 1515 3733;3734 2678;2679 2678 2 6935.4 0 ASAPAPGHH VYKIRAADKRSKALKASAPAPGHH______ RSKALKASAPAPGHH_______________ K A S H H - 3 0 0 0 0 0 0 1 2 0 0 0 0 0 2 1 0 0 0 0 0 0 9 0 843.39875 P56378 P56378 50 58 MP68 6.8 kDa mitochondrial proteolipid yes yes 2 0.005541 114.54 By MS/MS 10 0 1 1 4287900 4287900 0 1464 1044 1516 3735 2680 2680 1 4557600 0 ASASAPAPASATEILLTPAR FQPAVAGIKGDKADKASASAPAPASATEIL PAPASATEILLTPAREEQPPQHRSKRGGSV K A S A R E 7 1 0 0 0 0 1 0 0 1 2 0 0 0 3 3 2 0 0 0 0 0 20 0 1894.016 Q9NQX7 Q9NQX7 21 40 ITM2C Integral membrane protein 2C;CT-BRI3 yes yes 2 3.659E-12 158.31 By MS/MS 8 0 1 1 556980 556980 0 1465 2595 1517 3736 2681 2681 1 36744 0 ASAVSPANLPAVLLQPR ______________________________ AVSPANLPAVLLQPRWKRVVGWSGPVPRPR M A S P R W 4 1 1 0 0 1 0 0 0 0 3 0 0 0 3 2 0 0 0 2 0 0 17 0 1702.973 P51610 P51610 2 18 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 2;3 0.0010812 126.95 By MS/MS 3.2 0.748 1 2 2 5 473410 473410 0 1466 970 1518 3737;3738;3739;3740;3741 2682;2683;2684;2685 2684 3 13412 0 ASAVYQALQK QDVAGVFALSSFLNKASAVYQALQKSNGVL SFLNKASAVYQALQKSNGVLPELFQCHGTA K A S Q K S 3 0 0 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 10 0 1077.5819 Q5VWZ2 Q5VWZ2 154 163 LYPLAL1 Lysophospholipase-like protein 1 yes yes 2 0.0007541 134.26 By MS/MS 9 0.816 1 1 1 3 2673100 2673100 0 1467 1656 1519 3742;3743;3744 2686 2686 1 846620 0 ASCILQLVK LPQFVQSADLEVQERASCILQLVKHIQKLQ LEVQERASCILQLVKHIQKLQAKDVPVAEE R A S V K H 1 0 0 0 1 1 0 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 9 0 1030.5845 O14617 O14617 572 580 AP3D1 AP-3 complex subunit delta-1 yes yes 2 0.018767 97.431 By MS/MS 1 0 1 1 124890 124890 0 1468 117 1520 3745 2687 2687 1 6101.8 0 ASDEVPLAPR CFPLVKACVFGNEPKASDEVPLAPRTEAAE GNEPKASDEVPLAPRTEAAETTPMWQALKL K A S P R T 2 1 0 1 0 0 1 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 10 0 1053.5455 Q8TB61 Q8TB61 88 97 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.0043802 109.48 By MS/MS 1.5 0.5 1 1 2 818070 818070 0 1469 1988 1521 3746;3747 2688 2688 1 40149 0 ASDPGLPAEEPK GLPDGRFHLPPRIHRASDPGLPAEEPKEKS IHRASDPGLPAEEPKEKSSRKVAEPELMGT R A S P K E 2 0 0 1 0 0 2 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 12 0 1209.5877 P27708 P27708 1858 1869 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.055448 72.848 By MS/MS 1 0 1 1 209890 209890 0 1470 709 1522 3748 2689 2689 1 10255 0 ASEAKEGEEAGPGDPLLEAVPK MQRCIDSGLWVPNSKASEAKEGEEAGPGDP EEAGPGDPLLEAVPKTGDEKDVSV______ K A S P K T 4 0 0 1 0 0 5 3 0 0 2 2 0 0 3 1 0 0 0 1 0 0 22 1 2193.0801 Q16543 Q16543 348 369 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 3 0.00016215 92.034 By MS/MS 6.5 0.5 1 1 2 3704500 3704500 0 1471 1539 1523 3749;3750 2690;2691 2690 2 35309 0 ASEDIAKLAETLAK ______________________________ MASEDIAKLAETLAKTQVAGGQLSFKGKSL M A S A K T 4 0 0 1 0 0 2 0 0 1 2 2 0 0 0 1 1 0 0 0 0 0 14 1 1458.793 P46060 P46060 2 15 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 1.2763E-11 202 By MS/MS 7 2 1 1 1 1 1 1 1 7 9201200 9201200 0 1472 876 1524 3751;3752;3753;3754;3755;3756;3757 2692;2693;2694;2695;2696 2694 5 335840 0 ASEEHLK FEQKGFRLVAMKFLRASEEHLKQHYIDLKD LVAMKFLRASEEHLKQHYIDLKDRPFFPGL R A S L K Q 1 0 0 0 0 0 2 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 7 0 812.40283 P22392 P22392 43 49 NME2 Nucleoside diphosphate kinase B yes yes 2 0.015469 138.85 By MS/MS 10 0 1 1 80014 80014 0 1473 659 1525 3758 2697 2697 1 85046 0 ASEELQKDLEEVK ______________________________ ______________________________ M A S V K V 1 0 0 1 0 1 4 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 13 1 1516.7621 Q9HB71 Q9HB71 2 14 CACYBP Calcyclin-binding protein yes yes 2 1.354E-34 265 By MS/MS 8 0 1 1 7760300 7760300 0 1474 2549 1526 3759 2698 2698 1 511940 0 ASEGPAFFPGR LDVPPGEDKGGYVIKASEGPAFFPGRCAEI YVIKASEGPAFFPGRCAEIFARGQSVGKLG K A S G R C 2 1 0 0 0 0 1 2 0 0 0 0 0 2 2 1 0 0 0 0 0 0 11 0 1134.5458 Q9NSD9 Q9NSD9 537 547 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.001875 144.09 By MS/MS 5 0 1 1 0 0 0 1475 2623 1527 3760 2699 2699 1 0 0 ASELKEEIK KEALENCITLQDFNRASELKEEIKALEDAR LQDFNRASELKEEIKALEDARINLLKETEQ R A S I K A 1 0 0 0 0 0 3 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1045.5655 Q9BPX3 Q9BPX3 518 526 NCAPG Condensin complex subunit 3 yes yes 2 0.0005536 172.25 By MS/MS 4 0 1 1 1281200 1281200 0 1476 2302 1528 3761 2700 2700 1 34976 0 ASELLLPAAASLR SFIALSHKLGLPPGKASELLLPAAASLRQD GKASELLLPAAASLRQDLLLLQDQRSLWCW K A S L R Q 4 1 0 0 0 0 1 0 0 0 4 0 0 0 1 2 0 0 0 0 0 0 13 0 1310.7558 O94927 O94927 507 519 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 0.0011105 130.01 By MS/MS 5 0 1 1 580740 580740 0 1477 360 1529 3762 2701 2701 1 23871 0 ASELNPESIYSVFK LSRGGYTTALKSFTKASELNPESIYSVFKV KASELNPESIYSVFKVAAIQQILGKYKEAV K A S F K V 1 0 1 0 0 0 2 0 0 1 1 1 0 1 1 3 0 0 1 1 0 0 14 0 1582.7879 Q6PGP7 Q6PGP7 624 637 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 3.7323E-06 173.72 By MS/MS 3.5 0.5 1 1 2 473750 473750 0 1478 1714 1530 3763;3764 2702;2703 2702 2 12517 0 ASEQIYGTPSSSPYECLR NEGLLVAALEELAFKASEQIYGTPSSSPYE QIYGTPSSSPYECLRQSCNILISTMNKLAT K A S L R Q 1 1 0 0 1 1 2 1 0 1 1 0 0 0 2 4 1 0 2 0 0 0 18 0 2043.9208 Q14203 Q14203 873 890 DCTN1 Dynactin subunit 1 yes yes 2 7.0346E-19 206.49 By MS/MS 3.5 0.5 1 1 2 2614300 2614300 0 1479 1420 1531 3765;3766 2704 2704 1 68605 0 ASESQILSIAEK SLPYNMEKVLDKVFRASESQILSIAEKMLD VFRASESQILSIAEKMLDTRVAENRDLGMN R A S E K M 2 0 0 0 0 1 2 0 0 2 1 1 0 0 0 3 0 0 0 0 0 0 12 0 1274.6718 Q5JRA6 Q5JRA6 981 992 MIA3 Melanoma inhibitory activity protein 3 yes yes 2 9.6934E-05 164.9 By MS/MS 2 0 1 1 143320 143320 0 1480 1605 1532 3767 2705 2705 1 7123.5 0 ASETDALR AQLGSWGKGSSGGAKASETDALRSSASSLN GSSGGAKASETDALRSSASSLNRFSALQPP K A S L R S 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 8 0 861.41921 O43432 O43432 1085 1092 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0072772 128.61 By MS/MS 2.5 0.5 1 1 2 760350 760350 0 1481 200 1533 3768;3769 2706 2706 1 36613 0 ASEVEEILDGNDEKYK DHGYTTLATSVTLLKASEVEEILDGNDEKY SEVEEILDGNDEKYKAVSISTEPPTYLREQ K A S Y K A 1 0 1 2 0 0 4 1 0 1 1 2 0 0 0 1 0 0 1 1 0 0 16 1 1837.8582 Q12824 Q12824 93 108 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 3 0.050264 56.569 By MS/MS 7 0 1 1 986830 986830 0 1482 1308 1534 3770 2707 2707 1 17635 0 ASEVMGPVEAAPEYR EIMMKIEEYISKQAKASEVMGPVEAAPEYR ASEVMGPVEAAPEYRVIVDANNLTVEIENE K A S Y R V 3 1 0 0 0 0 3 1 0 0 0 0 1 0 2 1 0 0 1 2 0 0 15 0 1604.7505 Q8WWY3 Q8WWY3 77 91 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 0.0024208 109.72 By matching By MS/MS 6.33 0.471 2 1 1 2 345490 199040 146450 1483 2043 1535;1536 3771;3772;3773 2708;2709;2710 2709 1329 3 3556.8 449150 ASFPQGPIGGANR KLAGVTALSCWLPLRASFPQGPIGGANRDI LRASFPQGPIGGANRDISILQCHGDCDPLV R A S N R D 2 1 1 0 0 1 0 3 0 1 0 0 0 1 2 1 0 0 0 0 0 0 13 0 1270.6418 O75608 O75608 150 162 LYPLA1 Acyl-protein thioesterase 1 yes yes 2 0.0040942 107.11 By MS/MS 9 0 1 1 0 0 0 1484 320 1537 3774 2711 2711 1 0 0 ASFVQTR NFVETEQIVHYNGSKASFVQTRGSIPVFWS IVHYNGSKASFVQTRGSIPVFWSQRPNLKY K A S T R G 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 7 0 807.4239 Q9NTJ5 Q9NTJ5 251 257 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.012279 147.69 By MS/MS 2 0.816 1 1 1 3 1050500 1050500 0 1485 2631 1538 3775;3776;3777 2712 2712 1 47782 0 ASFVTEVLAHSGR ______________________________ ______________________________ M A S G R L 2 1 0 0 0 0 1 1 1 0 1 0 0 1 0 2 1 0 0 2 0 0 13 0 1372.7099 O43264 O43264 2 14 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.7959E-05 155 By MS/MS 4.75 0.829 2 1 1 4 1052700 1052700 0 1486 189 1539 3778;3779;3780;3781 2713;2714;2715;2716 2714 4 25326 0 ASFWLGELQR VQALYHDPDPSGKERASFWLGELQRSVHAW SGKERASFWLGELQRSVHAWEISDQLLQIR R A S Q R S 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 10 0 1205.6193 Q9Y5L0 Q9Y5L0 30 39 TNPO3 Transportin-3 yes yes 2 0.00022877 155.58 By MS/MS 4 0 1 1 812490 812490 0 1487 2974 1540 3782 2717 2717 1 22180 0 ASGADSKGDDLSTAILK ______________________________ GADSKGDDLSTAILKQKNRPNRLIVDEAIN M A S L K Q 3 0 0 3 0 0 0 2 0 1 2 2 0 0 0 3 1 0 0 0 0 0 17 1 1647.8315 P55072 P55072 2 18 VCP Transitional endoplasmic reticulum ATPase yes yes 2;3 3.5742E-33 258.39 By MS/MS By MS/MS 5.54 2.34 1 4 3 1 1 1 1 1 11 2 40311000 40070000 241830 1488 1026 1541 3783;3784;3785;3786;3787;3788;3789;3790;3791;3792;3793;3794;3795 2718;2719;2720;2721;2722;2723;2724;2725;2726;2727 2726 10 2477800 530090 ASGADSKGDDLSTAILKQK ______________________________ DSKGDDLSTAILKQKNRPNRLIVDEAINED M A S Q K N 3 0 0 3 0 1 0 2 0 1 2 3 0 0 0 3 1 0 0 0 0 0 19 2 1903.9851 P55072 P55072 2 20 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0013101 92.679 By MS/MS 6.5 2.5 1 1 2 2441100 2441100 0 1489 1026 1542 3796;3797 2728;2729 2729 2 444980 0 ASGAQLEAK LLILYALLSRLTGSRASGAQLEAKVRGLER RLTGSRASGAQLEAKVRGLERQVEELRWRQ R A S A K V 3 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 873.4556 Q9BVC6 Q9BVC6 207 215 TMEM109 Transmembrane protein 109 yes yes 2 2.0867E-08 209.21 By MS/MS 8.5 0.5 1 1 2 786570 786570 0 1490 2376 1543 3798;3799 2730 2730 1 413130 0 ASGCEGEDVVTLLK SLDESILLKWTKGFKASGCEGEDVVTLLKE KASGCEGEDVVTLLKEAIHRREEFDLDVVA K A S L K E 1 0 0 1 1 0 2 2 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 0 1476.713 P52789 P52789 625 638 HK2 Hexokinase-2 yes yes 2 6.6832E-12 196.16 By MS/MS 5 0.816 1 1 1 3 6511300 6511300 0 1491 992 1544 3800;3801;3802 2731 2731 1 164160 0 ASGDSARPVLLQVAESAYR EGTLPFNLAEAQRQKASGDSARPVLLQVAE SARPVLLQVAESAYRFGLGSVAGAVGATAV K A S Y R F 4 2 0 1 0 1 1 1 0 0 2 0 0 0 1 3 0 0 1 2 0 0 19 1 1989.028 Q9UJS0 Q9UJS0 313 331 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 2.2506E-10 163.62 By MS/MS 5.5 0.5 2 2 4 2621100 2621100 0 1492 2798 1545 3803;3804;3805;3806 2732;2733;2734 2732 3 68093 0 ASGEHSPGSGAAR ______________________________ ______________________________ M A S A R R 3 1 0 0 0 0 1 3 1 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1182.5378 Q9H4A4 Q9H4A4 2 14 RNPEP Aminopeptidase B yes yes 2 0.0042405 93.561 By MS/MS 5 0 1 1 1175200 1175200 0 1493 2497 1546 3807 2735 2735 1 48304 0 ASGGSGGVSVPALWSEVNR ______________________________ SGGVSVPALWSEVNRYGQNGDFTRALKTVN M A S N R Y 2 1 1 0 0 0 1 4 0 0 1 0 0 0 1 4 0 1 0 3 0 0 19 0 1828.9068 O76094 O76094 2 20 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.0012412 126.1 By MS/MS 5 0 1 1 524440 524440 0 1494 346 1547 3808 2736 2736 1 21556 0 ASGLVPNVVVLVATVR GADIGMEKFFNIKCRASGLVPNVVVLVATV SGLVPNVVVLVATVRALKMHGGGPSVTAGV R A S V R A 2 1 1 0 0 0 0 1 0 0 2 0 0 0 1 1 1 0 0 6 0 0 16 0 1592.9614 Q6UB35 Q6UB35 730 745 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.038336 70.728 By MS/MS 4 0 1 1 62255 62255 0 1495 1726 1548 3809 2737 2737 1 1699.5 0 ASGNTLVR SPGVGKTSLVGALAKASGNTLVRINLSEQT LVGALAKASGNTLVRINLSEQTDITDLFGA K A S V R I 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 816.44537 Q9NU22 Q9NU22 1769 1776 MDN1 Midasin yes yes 2 0.00063109 180.03 By MS/MS 1.5 0.5 1 1 2 551790 551790 0 1496 2635 1549 3810;3811 2738;2739 2738 2 27120 0 ASGPGLNTTGVPASLPVEFTIDAK FKVKVLPTHDASKVKASGPGLNTTGVPASL GVPASLPVEFTIDAKDAGEGLLAVQITDPE K A S A K D 3 0 1 1 0 0 1 3 0 1 2 1 0 1 3 2 3 0 0 2 0 0 24 0 2341.2165 P21333 P21333 1550 1573 FLNA Filamin-A yes yes 2 0.014405 60.489 By MS/MS 2 0 1 1 194830 194830 0 1497 648 1550 3812 2740;2741 2741 2 9684.3 0 ASGQAFELILSPR ______________________________ KRASGQAFELILSPRSKESVPEFPLSPPKK R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 P16949 P16949 15 27 STMN1 Stathmin yes yes 2 9.5715E-05 155.33 By MS/MS 9.5 0.5 1 1 2 801430 801430 0 1498 609 1551 3813;3814 2742;2743;2744 2742 3 583280 0 ASGTVYSGEEKLTELLVK LKEYSSMDAFWQEGRASGTVYSGEEKLTEL TVYSGEEKLTELLVKAYGDFAWSNPLHPDI R A S V K A 1 0 0 0 0 0 3 2 0 0 3 2 0 0 0 2 2 0 1 2 0 0 18 1 1923.0201 O95470 O95470 145 162 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.012354 113.37 By MS/MS 6 0 1 1 2536000 2536000 0 1499 395 1552 3815 2745 2745 1 19775 0 ASGVAVSDGVIK ______________________________ ______________________________ M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 P23528 P23528 2 13 CFL1 Cofilin-1 yes yes 2 0.00054853 128.03 By MS/MS By MS/MS 9.67 0.471 1 2 2 1 7155800 7073000 82864 1500 671 1553 3816;3817;3818 2746;2747;2748 2748 3 6436500 2125400 ASGVAVSDGVIKVFNDMK ______________________________ VAVSDGVIKVFNDMKVRKSSTPEEVKKRKK M A S M K V 2 0 1 2 0 0 0 2 0 1 0 2 1 1 0 2 0 0 0 4 0 0 18 1 1835.9451 P23528 P23528 2 19 CFL1 Cofilin-1 yes yes 2;3 2.3288E-07 147.39 By MS/MS 9.5 0.5 2 2 4 1407000 1407000 0 1501 671 1554 3819;3820;3821;3822 2749;2750;2751 2749 451 3 1291500 0 ASGVAVSDGVIKVFNDMKVR ______________________________ VSDGVIKVFNDMKVRKSSTPEEVKKRKKAV M A S V R K 2 1 1 2 0 0 0 2 0 1 0 2 1 1 0 2 0 0 0 5 0 0 20 2 2091.1147 P23528 P23528 2 21 CFL1 Cofilin-1 yes yes 3 0.014495 54.103 By MS/MS 9.5 0.5 1 1 2 254490 254490 0 1502 671 1555 3823;3824 2752 2752 451 1 234920 0 ASGVEGADVVK KIDEAILITWTKRFKASGVEGADVVKLLNK KRFKASGVEGADVVKLLNKAIKKRGDYDAN K A S V K L 2 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 11 0 1030.5295 P19367 P19367 177 187 HK1 Hexokinase-1 yes yes 2 0.00078591 136.52 By MS/MS 3.5 1.12 1 1 1 1 4 3508100 3508100 0 1503 630 1556 3825;3826;3827;3828 2753 2753 1 99928 0 ASGVQVADEVCR ______________________________ ______________________________ M A S C R I 2 1 0 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1289.6034 P60981 P60981 2 13 DSTN Destrin yes yes 2 0.00011436 147.72 By MS/MS 10 0 1 1 1325300 1325300 0 1504 1079 1557 3829 2754 2754 1 1408700 0 ASHPSVTER LNPKTLPSGLDDYPRASHPSVTERHLDLRC LDDYPRASHPSVTERHLDLRCWVALGARVL R A S E R H 1 1 0 0 0 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 0 0 9 0 982.48321 Q13724 Q13724 588 596 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 0.036903 87.181 By MS/MS 5 0 1 1 693370 693370 0 1505 1396 1558 3830 2755 2755 1 28500 0 ASIKKGEDFVK SFEEKMISDAIPELKASIKKGEDFVKTLK_ PELKASIKKGEDFVKTLK____________ K A S V K T 1 0 0 1 0 0 1 1 0 1 0 3 0 1 0 1 0 0 0 1 0 0 11 2 1220.6765 P40926 P40926 325 335 MDH2 Malate dehydrogenase, mitochondrial yes yes 3 0.02339 80.916 By MS/MS 8 0 1 1 1020500 1020500 0 1506 832 1559 3831 2756 2756 1 67325 0 ASILDEYENSLSR ______________________________ ______________________________ M A S S R S 1 1 1 1 0 0 2 0 0 1 2 0 0 0 0 3 0 0 1 0 0 0 13 0 1495.7155 Q9P253 Q9P253 2 14 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 1.1435E-05 165.63 By MS/MS 3.5 0.5 1 1 2 604990 604990 0 1507 2734 1560 3832;3833 2757 2757 1 16491 0 ASILWLIGENCER HMAKLLDSITVPVARASILWLIGENCERVP ARASILWLIGENCERVPKIAPDVLRKMAKS R A S E R V 1 1 1 0 1 0 2 1 0 2 2 0 0 0 0 1 0 1 0 0 0 0 13 0 1559.7766 O00203 O00203 497 509 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0016244 123.67 By MS/MS 4 0 1 1 162320 162320 0 1508 77 1561 3834 2758 2758 1 4431.1 0 ASIPFSVVGSNQLIEAK SDEDEDFKEQTRLLKASIPFSVVGSNQLIE IPFSVVGSNQLIEAKGKKVRGRLYPWGVVE K A S A K G 2 0 1 0 0 1 1 1 0 2 1 1 0 1 1 3 0 0 0 2 0 0 17 0 1758.9516 Q15019 Q15019 233 249 SEPT2 Septin-2 yes yes 2 2.433E-10 186.51 By MS/MS 7 0 1 1 1778000 1778000 0 1509 1462 1562 3835 2759 2759 1 31772 0 ASISEPSDTDPEPR QPLLHKVKSRVRVRRASISEPSDTDPEPRT RASISEPSDTDPEPRTLNPSPAGWFVQQHP R A S P R T 1 1 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 14 0 1499.674 Q8N1F8 Q8N1F8 386 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.0024174 115 By MS/MS 3.5 0.5 1 1 2 492980 492980 0 1510 1899 1563 3836;3837 2760 2760 1 13078 0 ASISQGPPTASR VAMAIAGGPLAPGSRASISQGPPTASRAGC GSRASISQGPPTASRAGCALSAESSRTLLA R A S S R A 2 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 0 0 0 0 12 0 1170.5993 Q96HP0 Q96HP0 1229 1240 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0003046 147.74 By MS/MS 2 0 1 1 550140 550140 0 1511 2193 1564 3838 2761 2761 1 27345 0 ASKEMFEDTVEER ______________________________ ______________________________ M A S E R V 1 1 0 1 0 0 4 0 0 0 0 1 1 1 0 1 1 0 0 1 0 0 13 1 1569.6981 Q16576 Q16576 2 14 RBBP7 Histone-binding protein RBBP7 yes yes 2 0.00036129 153.38 By MS/MS 6.5 0.5 1 1 2 3576400 3576400 0 1512 1541 1565 3839;3840 2762 2762 1 30586 0 ASLACGPMVK NYMSNPSYNYEIVNRASLACGPMVKWAIAQ EIVNRASLACGPMVKWAIAQLNYADMLKRV R A S V K W 2 0 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 0 1 0 0 10 0 1032.5096 Q14204 Q14204 3385 3394 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0033104 120.87 By MS/MS 1 0 1 1 0 0 0 1513 1421 1566 3841 2763 2763 1 0 0 ASLCISTK MIEKLGGKLTGTANKASLCISTKKEVEKMN LTGTANKASLCISTKKEVEKMNKKMEEVKE K A S T K K 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 8 0 878.45315 P09874 P09874 426 433 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.005704 134.48 By MS/MS 3.5 0.5 1 1 2 2434400 2434400 0 1514 521 1567 3842;3843 2764 2764 1 66241 0 ASLEDAPVDDLTR AERSCTPSPDQISHRASLEDAPVDDLTRKF HRASLEDAPVDDLTRKFTYLGSQDRARPPS R A S T R K 2 1 0 3 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1400.6783 Q7Z2W4 Q7Z2W4 283 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 1.7234E-05 170.52 By MS/MS By MS/MS 5.2 1.17 2 1 1 1 4 1 10927000 10847000 79887 1515 1777 1568 3844;3845;3846;3847;3848 2765;2766;2767;2768 2767 3 288350 166930 ASLEEPPDGPSAGQATGPGEGR DAGGPRPESPVPAGRASLEEPPDGPSAGQA DGPSAGQATGPGEGRRSTESEVYDDGTNTF R A S G R R 3 1 0 1 0 1 3 5 0 0 1 0 0 0 4 2 1 0 0 0 0 0 22 0 2078.9505 Q9BVG9 Q9BVG9 23 44 PTDSS2 Phosphatidylserine synthase 2 yes yes 2 0.001356 81.428 By MS/MS 1.5 0.5 1 1 2 266290 266290 0 1516 2378 1569 3849;3850 2769 2769 1 13064 0 ASLENSLEETK MQNLEIELQSQLSMKASLENSLEETKGRYC LSMKASLENSLEETKGRYCMQLAQIQEMIG K A S T K G 1 0 1 0 0 0 3 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 11 0 1219.5932 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P02533 353 363 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.00078591 136.52 By MS/MS 3 0 1 1 124050 0 124050 + 1517 35;47 1570 3851 2770 2770 1 0 177790 ASLEVSR ______________________________ ______________________________ M A S S R S 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 7 0 760.40792 O60762 O60762 2 8 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.014762 108.46 By MS/MS 8 0 1 1 1325900 1325900 0 1518 263 1571 3852 2771 2771 1 87468 0 ASLEVSRSPR ______________________________ ______________________________ M A S P R R 1 2 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 1 1100.5938 O60762 O60762 2 11 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0018059 139.38 By MS/MS 8.5 1.12 1 1 1 1 4 4018700 4018700 0 1519 263 1572 3853;3854;3855;3856 2772 2772 1 494210 0 ASLLDPVPEVR KDLAPYLPSVTPGLKASLLDPVPEVRTVSA PGLKASLLDPVPEVRTVSAKALGAMVKGMG K A S V R T 1 1 0 1 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6608 Q92616 Q92616 1664 1674 GCN1L1 Translational activator GCN1 yes yes 2 0.017523 91.584 By MS/MS 2.5 1.12 1 1 1 1 4 4632200 4632200 0 1520 2068 1573 3857;3858;3859;3860 2773;2774 2774 2 192180 0 ASLLDSNVLVQR YMLGTNHQLTVKSLRASLLDSNVLVQRNNL SLRASLLDSNVLVQRNNLEIVLFFFPFYTC R A S Q R N 1 1 1 1 0 1 0 0 0 0 3 0 0 0 0 2 0 0 0 2 0 0 12 0 1313.7303 Q9Y3R5 Q9Y3R5 233 244 DOPEY2 Protein dopey-2 yes yes 2 6.5434E-05 162.64 By MS/MS 2.5 0.5 1 1 2 499900 499900 0 1521 2942 1574 3861;3862 2775 2775 1 18590 0 ASLLKVDQEVK ______________________________ ______________________________ M A S V K L 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 0 2 0 0 11 1 1228.7027 P61289 P61289 2 12 PSME3 Proteasome activator complex subunit 3 yes yes 2 1.7363E-06 184.71 By MS/MS By matching 8.5 0.866 3 1 3 1 16888000 16844000 44277 1522 1096 1575 3863;3864;3865;3866 2776;2777;2778 2776 2 1207600 377740 ASLNPSDTPPSVVNEDFLHDLK QNTLGVNVEHKTTSKASLNPSDTPPSVVNE TPPSVVNEDFLHDLKETNISYSQEADDRVF K A S L K E 1 0 2 3 0 0 1 0 1 0 3 1 0 1 3 3 1 0 0 2 0 0 22 0 2394.1703 O00116 O00116 148 169 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 0.010596 61.862 By MS/MS 5 0 1 1 658530 658530 0 1523 67 1576 3867 2779 2779 1 27068 0 ASLSLAPVNIFK ______________________________ ______________________________ M A S F K A 2 0 1 0 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 1 0 0 12 0 1258.7285 P78371 P78371 2 13 CCT2 T-complex protein 1 subunit beta yes yes 2 0.00012881 145.9 By MS/MS By MS/MS 5.62 2.53 1 1 1 1 1 4 1 1 1 1 12 1 210890000 210860000 31922 1524 1195 1577 3868;3869;3870;3871;3872;3873;3874;3875;3876;3877;3878;3879;3880 2780;2781;2782;2783;2784;2785;2786;2787;2788;2789;2790;2791;2792;2793;2794 2787 15 3143500 97902 ASLSLAPVNIFKAGADEER ______________________________ LAPVNIFKAGADEERAETARLTSFIGAIAI M A S E R A 4 1 1 1 0 0 2 1 0 1 2 1 0 1 1 2 0 0 0 1 0 0 19 1 1987.0375 P78371 P78371 2 20 CCT2 T-complex protein 1 subunit beta yes yes 2 0.00030151 127.66 By MS/MS 8.33 1.7 1 1 1 3 6658500 6658500 0 1525 1195 1578 3881;3882;3883 2795;2796 2795 1 165880 0 ASLSLAPVNIFKAGADEERAETAR ______________________________ IFKAGADEERAETARLTSFIGAIAIGDLVK M A S A R L 6 2 1 1 0 0 3 1 0 1 2 1 0 1 1 2 1 0 0 1 0 0 24 2 2515.3031 P78371 P78371 2 25 CCT2 T-complex protein 1 subunit beta yes yes 3 0.01854 46.833 By MS/MS 6 0 1 1 22880000 22880000 0 1526 1195 1579 3884 2797 2797 1 178420 0 ASLSLIEK KIEALQNHENESVYKASLSLIEKYFSVEEE ENESVYKASLSLIEKYFSVEEEEDQNVVPE K A S E K Y 1 0 0 0 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 8 0 859.50148 P52292 P52292 487 494 KPNA2 Importin subunit alpha-1 yes yes 2 2.164E-05 205.58 By MS/MS 6 0 1 1 11739000 11739000 0 1527 983 1580 3885 2798 2798 1 91542 0 ASLTYAEAQLR EILKTKFTKSVINSKASLTYAEAQLRIDSA INSKASLTYAEAQLRIDSANMNDDITTSLR K A S L R I 3 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 11 0 1221.6354 Q9Y2L1 Q9Y2L1 586 596 DIS3 Exosome complex exonuclease RRP44 yes yes 2 5.7551E-11 208.03 By MS/MS 2.5 1.12 1 1 1 1 4 6971400 6971400 0 1528 2892 1581 3886;3887;3888;3889 2799;2800 2800 2 195700 0 ASMGTLAFDEYGRPFLIIK ______________________________ TLAFDEYGRPFLIIKDQDRKSRLMGLEALK M A S I K D 2 1 0 1 0 0 1 2 0 2 2 1 1 2 1 1 1 0 1 0 0 0 19 1 2128.1027 P48643 P48643 2 20 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.00027857 153.32 By MS/MS 6 0 2 2 4532700 4532700 0 1529 909 1582;1583 3890;3891 2801;2802 2802 643 2 35346 0 ASMGTLAFDEYGRPFLIIKDQDR ______________________________ DEYGRPFLIIKDQDRKSRLMGLEALKSHIM M A S D R K 2 2 0 3 0 1 1 2 0 2 2 1 1 2 1 1 1 0 1 0 0 0 23 2 2642.3163 P48643 P48643 2 24 CCT5 T-complex protein 1 subunit epsilon yes yes 3 6.2415E-07 115.42 By MS/MS 6 0 2 2 16719000 16719000 0 1530 909 1584;1585 3892;3893 2803;2804;2805 2803 643 3 130380 0 ASNGDAWVEAHGK EVQKDIKNVPFKIVRASNGDAWVEAHGKLY VRASNGDAWVEAHGKLYSPSQIGAFVLMKM R A S G K L 3 0 1 1 0 0 1 2 1 0 0 1 0 0 0 1 0 1 0 1 0 0 13 0 1340.6109 P38646 P38646 147 159 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 2.0906E-05 193.22 By MS/MS By matching 5.67 0.745 3 2 1 5 1 9915800 9873000 42770 1531 820 1586 3894;3895;3896;3897;3898;3899 2806;2807 2807 2 369580 126560 ASNKVQDSAPVETPR TKDQSPSRAPGLRQRASNKVQDSAPVETPR ASNKVQDSAPVETPRGKPPLNTRSQAPLLR R A S P R G 2 1 1 1 0 1 1 0 0 0 0 1 0 0 2 2 1 0 0 2 0 0 15 1 1597.806 P09601 P09601 240 254 HMOX1 Heme oxygenase 1 yes yes 3 0.029712 51.727 By MS/MS 8 0 1 1 836250 836250 0 1532 517 1587 3900 2808 2808 1 55167 0 ASNLENSTYDLYTIPK MSYNPAENAVLLCTRASNLENSTYDLYTIP SNLENSTYDLYTIPKDADSQNPDAPEGKRS R A S P K D 1 0 2 1 0 0 1 0 0 1 2 1 0 0 1 2 2 0 2 0 0 0 16 0 1827.8891 P53621 P53621 383 398 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 1.0739E-14 203.74 By MS/MS 2.5 1.12 1 1 1 1 4 7044700 7044700 0 1533 1005 1588 3901;3902;3903;3904 2809;2810;2811 2811 3 220970 0 ASNLLYGQLK PWCPPCRALLPELRRASNLLYGQLKFGTLD PELRRASNLLYGQLKFGTLDCTVHEGLCNM R A S L K F 1 0 1 0 0 1 0 1 0 0 3 1 0 0 0 1 0 0 1 0 0 0 10 0 1105.6132 Q8IXB1 Q8IXB1 493 502 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 0.0001244 162.88 By MS/MS 5 0 1 1 1168200 1168200 0 1534 1870 1589 3905 2812 2812 1 48019 0 ASNNDLNVATNFLLQH MEMGFSRGDALEALRASNNDLNVATNFLLQ SNNDLNVATNFLLQH_______________ R A S Q H - 2 0 4 1 0 1 0 0 1 0 3 0 0 1 0 1 1 0 0 1 0 0 16 0 1769.8697 Q8NBM4 Q8NBM4 329 344 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 0.040822 69.451 By MS/MS 1 0 1 1 63081 63081 0 1535 1942 1590 3906 2813 2813 1 3082 0 ASNPERGEILLTELQGDSR ______________________________ ERGEILLTELQGDSRSLPFSENVSAVQKLD M A S S R S 1 2 1 1 0 1 3 2 0 1 3 0 0 0 1 2 1 0 0 0 0 0 19 1 2084.0498 Q16513 Q16513 2 20 PKN2 Serine/threonine-protein kinase N2 yes yes 2;3 1.8421E-05 126.43 By MS/MS 3.5 0.5 2 2 4 2105400 2105400 0 1536 1535 1591 3907;3908;3909;3910 2814;2815;2816;2817 2817 4 56071 0 ASNTADTLFQEVLGR VEGSMTQKLENVLNRASNTADTLFQEVLGR ASNTADTLFQEVLGRKDKADSTRNALNVLQ R A S G R K 2 1 1 1 0 1 1 1 0 0 2 0 0 1 0 1 2 0 0 1 0 0 15 0 1620.8107 Q96KP1 Q96KP1 249 263 EXOC2 Exocyst complex component 2 yes yes 2 3.488E-14 198.37 By MS/MS 3.5 0.5 1 1 2 386180 386180 0 1537 2221 1592 3911;3912 2818 2818 1 10505 0 ASNTAEVFFDGVR GGITHGPPEKKMGIKASNTAEVFFDGVRVP IKASNTAEVFFDGVRVPSENVLGEVGSGFK K A S V R V 2 1 1 1 0 0 1 1 0 0 0 0 0 2 0 1 1 0 0 2 0 0 13 0 1411.6732 P49748 P49748 304 316 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 1.0796E-18 232.17 By MS/MS 5.5 0.5 1 1 2 1323500 1323500 0 1538 929 1593 3913;3914 2819 2819 1 37007 0 ASNVTNKTDPR ______________________________ ______________________________ M A S P R S 1 1 2 1 0 0 0 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 11 1 1201.6051 P07910 P07910 2 12 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 0.049032 55.084 By MS/MS 8.5 1.12 1 1 1 1 4 10796000 10796000 0 1539 495 1594 3915;3916;3917;3918 2820 2820 0 375830 0 ASNYEKELK ARRSLEKEKNSLMNKASNYEKELKFLRQEN NSLMNKASNYEKELKFLRQENRKNMLLSVA K A S L K F 1 0 1 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 9 1 1080.5451 Q9P0B6 Q9P0B6 60 68 CCDC167 Coiled-coil domain-containing protein 167 yes yes 2 0.017174 126.31 By MS/MS 10 0 1 1 227800 227800 0 1540 2724 1595 3919 2821 2821 1 242130 0 ASPAAPADGAAPAQPSIR VRRLQEKTEQEAAQRASPAAPADGAAPAQP AAPADGAAPAQPSIRYRKDRVVARRAPCFP R A S I R Y 7 1 0 1 0 1 0 1 0 1 0 0 0 0 4 2 0 0 0 0 0 0 18 0 1646.8376 Q9P1Y5 Q9P1Y5 192 209 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 5.9772E-11 170 By MS/MS 3 0 1 1 662170 662170 0 1541 2733 1596 3920 2822 2822 1 17286 0 ASPSPTDPVVPAVPIGPPPAGFR GHVMVNGPTTPIPVKASPSPTDPVVPAVPI VVPAVPIGPPPAGFRDILLREGPEGFARAV K A S F R D 3 1 0 1 0 0 0 2 0 1 0 0 0 1 8 2 1 0 0 3 0 0 23 0 2225.1845 P11498 P11498 520 542 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.027686 82.925 By MS/MS 4 0.816 1 1 1 3 1658000 1658000 0 1542 555 1597 3921;3922;3923 2823 2823 1 47000 0 ASQEADNVLILQDR DDKELQTASIFGSAKASQEADNVLILQDRK KASQEADNVLILQDRKLVTGPGKRYLQVSK K A S D R K 2 1 1 2 0 2 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 14 0 1570.7951 Q96RR1 Q96RR1 579 592 PEO1 Twinkle protein, mitochondrial yes yes 2 5.2594E-26 246.63 By MS/MS By MS/MS 5 0 3 2 1 2421400 2370500 50892 1543 2250 1598 3924;3925;3926 2824;2825 2825 2 97436 150590 ASQNPGAAQPR NLRPSPNLRPSPNSRASQNPGAAQPRDVAL PNSRASQNPGAAQPRDVALLQERANKLVKY R A S P R D 3 1 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 11 0 1095.5421 Q9Y5V3 Q9Y5V3 456 466 MAGED1 Melanoma-associated antigen D1 yes yes 2 7.4923E-07 182.39 By MS/MS By matching 4 0 2 1 1 1357700 1341400 16276 1544 2982 1599 3927;3928 2826 2826 1 36620 34010 ASQNRDPAATSVAAAR ______________________________ SQNRDPAATSVAAARKGAEPSGGAARGPVG M A S A R K 6 2 1 1 0 1 0 0 0 0 0 0 0 0 1 2 1 0 0 1 0 0 16 1 1584.7968 O00762 O00762 2 17 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 2 0.00012857 165.51 By MS/MS 9.5 0.5 1 1 2 1996900 1996900 0 1545 108 1600 3929;3930 2827;2828 2827 2 1712300 0 ASQSQGIQQLLQAEK ______________________________ ASQSQGIQQLLQAEKRAAEKVSEARKRKNR M A S E K R 2 0 0 0 0 5 1 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 15 0 1627.8529 O75348;O95670 O75348 2 16 ATP6V1G1;ATP6V1G2 V-type proton ATPase subunit G 1;V-type proton ATPase subunit G 2 yes no 2 3.2834E-10 181.76 By MS/MS 10 0 1 1 525630 525630 0 1546 298 1601 3931 2829 2829 1 558690 0 ASQSQGIQQLLQAEKR ______________________________ SQSQGIQQLLQAEKRAAEKVSEARKRKNRR M A S K R A 2 1 0 0 0 5 1 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 16 1 1783.9541 O75348;O95670 O75348 2 17 ATP6V1G1;ATP6V1G2 V-type proton ATPase subunit G 1;V-type proton ATPase subunit G 2 yes no 2;3 9.0377E-29 283.05 By MS/MS 10 0 2 2 1241600 1241600 0 1547 298 1602 3932;3933 2830;2831 2830 2 1319700 0 ASSAAGLTAAVVR HVEEFSPRAVYTSGKASSAAGLTAAVVRDE GKASSAAGLTAAVVRDEESHEFVIEAGALM K A S V R D 5 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 1 0 0 2 0 0 13 0 1172.6513 Q14566 Q14566 423 435 MCM6 DNA replication licensing factor MCM6 yes yes 2 7.1247E-18 226.29 By MS/MS 4.5 0.5 1 1 2 1786800 1786800 0 1548 1436 1603 3934;3935 2832 2832 1 52585 0 ASSAASSEHFEK ______________________________ ______________________________ M A S E K L 3 0 0 0 0 0 2 0 1 0 0 1 0 1 0 4 0 0 0 0 0 0 12 0 1249.5575 Q9UEU0 Q9UEU0 2 13 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes yes 2 0.00087791 119.34 By MS/MS 8 0 1 1 376230 376230 0 1549 2765 1604 3936 2833 2833 1 24820 0 ASSAQSGGSSGGPAVPTVQR ______________________________ SGGSSGGPAVPTVQRGIIKMVLSGCAIIVR M A S Q R G 3 1 0 0 0 2 0 4 0 0 0 0 0 0 2 5 1 0 0 2 0 0 20 0 1799.8762 Q7KZF4 Q7KZF4 2 21 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0010908 83.633 By MS/MS By matching 4 0 2 1 1 1728100 1685500 42592 1550 1757 1605 3937;3938 2834 2834 1 46012 88998 ASSEMALYQK IREAKLAGDHIEYYKASSEMALYQKKHGIK IEYYKASSEMALYQKKHGIKLYKPLILPVT K A S Q K K 2 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 0 0 10 0 1126.5329 Q15070 Q15070 198 207 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.00033854 145.17 By MS/MS 6.5 0.5 1 1 2 1648900 1648900 0 1551 1477 1606 3939;3940 2835 2835 1153 1 27313 0 ASSGAGDPLDSK ______________________________ ______________________________ M A S S K R 2 0 0 2 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 12 0 1103.5095 Q9Y2R0 Q9Y2R0 2 13 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 0.00016718 141.1 By MS/MS 10 0 1 1 2939900 2939900 0 1552 2897 1607 3941 2836 2836 1 3124800 0 ASSGAGDPLDSKR ______________________________ ______________________________ M A S K R G 2 1 0 2 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 13 1 1259.6106 Q9Y2R0 Q9Y2R0 2 14 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 0.00090536 141.89 By MS/MS 10 0 2 2 1119200 1119200 0 1553 2897 1608 3942;3943 2837;2838 2837 2 1189600 0 ASSGLLYPLER FQGHSGAQCITCSYKASSGLLYPLERGFIY CSYKASSGLLYPLERGFIYVHKPPVHIRFD K A S E R G 1 1 0 0 0 0 1 1 0 0 3 0 0 0 1 2 0 0 1 0 0 0 11 0 1204.6452 Q08945 Q08945 347 357 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.0033885 114.5 By MS/MS 4 2.16 1 1 1 1 1 1 6 7068100 7068100 0 1554 1291 1609 3944;3945;3946;3947;3948;3949 2839;2840;2841 2841 3 207420 0 ASSLGEIDESSELR LDFDLEPEPPPAPPRASSLGEIDESSELRV RASSLGEIDESSELRVLDIPGQDSETVFDI R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.010588 122.18 By MS/MS 4 0.816 1 1 1 3 1805500 1805500 0 1555 1535 1610 3950;3951;3952 2842 2842 1 51152 0 ASSLISLLK VIILSLDRSDEDKEKASSLISLLKQEGIAT DEDKEKASSLISLLKQEGIATSDNFMQAFL K A S L K Q 1 0 0 0 0 0 0 0 0 1 3 1 0 0 0 3 0 0 0 0 0 0 9 0 930.57498 P78344 P78344 600 608 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00051237 153.08 By MS/MS 5 0.816 1 1 1 3 1861200 1861200 0 1556 1192 1611 3953;3954;3955 2843;2844 2843 2 50949 0 ASSLLAGER ______________________________ ______________________________ M A S E R L 2 1 0 0 0 0 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 902.48214 Q8N511 Q8N511 2 10 TMEM199 Transmembrane protein 199 yes yes 2 0.0010564 120.99 By MS/MS 9 0 1 1 1168400 1168400 0 1557 1918 1612 3956 2845 2845 1 670560 0 ASSLLAGERLVR ______________________________ ______________________________ M A S V R A 2 2 0 0 0 0 1 1 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 1 1270.7357 Q8N511 Q8N511 2 13 TMEM199 Transmembrane protein 199 yes yes 2 0.026067 97.813 By MS/MS 9 0 1 1 233850 233850 0 1558 1918 1613 3957 2846 2846 1 134210 0 ASSSGSKAEFIVGGK ______________________________ ASSSGSKAEFIVGGKYKLVRKIGSGSFGDI M A S G K Y 2 0 0 0 0 0 1 3 0 1 0 2 0 1 0 4 0 0 0 1 0 0 15 1 1423.7307 P48729 P48729 2 16 CSNK1A1 Casein kinase I isoform alpha yes yes 2 2.847E-05 148.13 By MS/MS 8 0 1 1 1594500 1594500 0 1559 911 1614 3958 2847 2847 1 105190 0 ASSSLGLQDFDLLR VGEEKEAMNTRESGKASSSLGLQDFDLLRV KASSSLGLQDFDLLRVIGRGSYAKVLLVRL K A S L R V 1 1 0 2 0 1 0 1 0 0 4 0 0 1 0 3 0 0 0 0 0 0 14 0 1520.7835 P41743 P41743 245 258 PRKCI Protein kinase C iota type yes yes 2 5.8086E-12 198.55 By MS/MS 5 0 1 1 322160 322160 0 1560 842 1615 3959 2848 2848 1 13242 0 ASSTCPLTFENVK PGLHIGKPENKLGLRASSTCPLTFENVKVP LRASSTCPLTFENVKVPEANILGQIGHGYK R A S V K V 1 0 1 0 1 0 1 0 0 0 1 1 0 1 1 2 2 0 0 1 0 0 13 0 1452.6919 P45954 P45954 257 269 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 2.8728E-05 166.29 By MS/MS 8 0.816 1 1 1 3 5029200 5029200 0 1561 871 1616 3960;3961;3962 2849 2849 1 152890 0 ASSTSPVEISEWLDQK FDAAATSGGSASSEKASSTSPVEISEWLDQ SSTSPVEISEWLDQKLTKSDRPELTGAKVV K A S Q K L 1 0 0 1 0 1 2 0 0 1 1 1 0 0 1 4 1 1 0 1 0 0 16 0 1775.8578 P13804 P13804 188 203 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 1.5181E-15 212.9 By MS/MS 8 0 1 1 2315800 2315800 0 1562 582 1617 3963 2850 2850 1 152770 0 ASSVGNVADSTEPTKR ______________________________ SSVGNVADSTEPTKRMLSFQGLAELAHREY M A S K R M 2 1 1 1 0 0 1 1 0 0 0 1 0 0 1 3 2 0 0 2 0 0 16 1 1617.7958 O15294 O15294 2 17 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 3.4297E-14 202.29 By MS/MS By MS/MS 4 0 2 1 1 3512000 3424000 88027 1563 167 1618 3964;3965 2851;2852 2852 2 93471 183940 ASSVLAQR DARIQQKREEQRRRRASSVLAQRRAQSIER EEQRRRRASSVLAQRRAQSIERKQESEPRI R A S Q R R 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 8 0 830.46102 O14681 O14681 45 52 EI24 Etoposide-induced protein 2.4 homolog yes yes 2 0.0090006 122.18 By MS/MS 1 0 1 1 545480 545480 0 1564 121 1619 3966 2853 2853 1 26651 0 ASTEGVAIQGQQGTR KNPPKNVQQHEKVQKASTEGVAIQGQQGTR ASTEGVAIQGQQGTRLLPEQLIKEAFILSD K A S T R L 2 1 0 0 0 3 1 3 0 1 0 0 0 0 0 1 2 0 0 1 0 0 15 0 1501.7485 Q92621 Q92621 70 84 NUP205 Nuclear pore complex protein Nup205 yes yes 2 3.4562E-14 198.52 By MS/MS 3 1.41 1 1 1 1 1 5 3290400 3290400 0 1565 2070 1620 3967;3968;3969;3970;3971 2854;2855 2854 2 140310 0 ASTEVGEMAK LQHLSSGHFLRENIKASTEVGEMAKQYIEK RENIKASTEVGEMAKQYIEKSLLVPDHVIT K A S A K Q 2 0 0 0 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 10 0 1021.475 P27144 P27144 46 55 AK4 Adenylate kinase 4, mitochondrial yes yes 2 0.0060935 103.88 By MS/MS 8.33 0.471 2 1 3 2141200 2141200 0 1566 702 1621;1622 3972;3973;3974 2856;2857 2857 471 2 169630 0 ASTISAYKEK ______________________________ ______________________________ M A S E K M 2 0 0 0 0 0 1 0 0 1 0 2 0 0 0 2 1 0 1 0 0 0 10 1 1096.5764 Q9NZ72 Q9NZ72 2 11 STMN3 Stathmin-3 yes yes 2 0.0019499 137.05 By MS/MS 9 0 1 1 472820 472820 0 1567 2708 1623 3975 2858;2859 2858 2 271360 0 ASTKFWIKQK ISGDKVEIDPVTNQKASTKFWIKQKPISID VTNQKASTKFWIKQKPISIDSDLLCACDLA K A S Q K P 1 0 0 0 0 1 0 0 0 1 0 3 0 1 0 1 1 1 0 0 0 0 10 2 1235.7026 Q9BPZ7 Q9BPZ7 419 428 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 yes yes 4 0.042762 65.305 By MS/MS 6 0 1 1 2324500 2324500 0 1568 2304 1624 3976 2860 2860 1 18127 0 ASTLLRDEELEEIKK ______________________________ ASTLLRDEELEEIKKETGFSHSQITRLYSR R A S K K E 1 1 0 1 0 0 4 0 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 2 1772.952 Q99653 Q99653 5 19 CHP1 Calcineurin B homologous protein 1 yes yes 3 0.0098696 85.734 By MS/MS 9 0 1 1 1649300 1649300 0 1569 2281 1625 3977 2861 2861 1 946530 0 ASTLQLGSPR SAHPGLEFSKTSSSKASTLQLGSPRATGVD TSSSKASTLQLGSPRATGVDEEDVEVFDSF K A S P R A 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 10 0 1028.5615 Q7L8L6 Q7L8L6 88 97 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.0010272 121.6 By MS/MS By matching 5 0 2 1 1 6845500 6817300 28149 1570 1770 1626 3978;3979 2862 2862 1 280220 83293 ASTNIQDTEGNTPLHLACDEER AKGNLKMIHILLYYKASTNIQDTEGNTPLH TEGNTPLHLACDEERVEEAKLLVSQGASIY K A S E R V 2 1 2 2 1 1 3 1 1 1 2 0 0 0 1 1 3 0 0 0 0 0 22 0 2470.103 O75832 O75832 163 184 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 3 0.00029892 85.855 By MS/MS 9 0 1 1 1857300 1857300 0 1571 332 1627 3980 2863 2863 1 1065900 0 ASTSTTIRSHSSSR ______________________________ MASTSTTIRSHSSSRRGFSANSARLPGVSR M A S S R R 1 2 0 0 0 0 0 0 1 1 0 0 0 0 0 6 3 0 0 0 0 0 14 1 1476.7281 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 2 15 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 3 0.0070693 84.892 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 2356300 0 2356300 + 1572 36;53;449 1628 3981;3982;3983;3984;3985;3986;3987;3988;3989;3990 2864;2865 2865 2 0 4732900 ASTSTTIRSHSSSRR ______________________________ ASTSTTIRSHSSSRRGFSANSARLPGVSRS M A S R R G 1 3 0 0 0 0 0 0 1 1 0 0 0 0 0 6 3 0 0 0 0 0 15 2 1632.8292 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 2 16 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 3 0.026348 62.035 By MS/MS 1 0 1 1 131110 0 131110 + 1573 36;53;449 1629 3991 2866 2866 1 0 131110 ASVAAQQQEEAR YKREEEDREVAAAVRASVAAQQQEEARRSE AVRASVAAQQQEEARRSEDQEEGGRPKKEE R A S A R R 4 1 0 0 0 3 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 12 0 1286.6215 Q86UK7 Q86UK7 351 362 ZNF598 Zinc finger protein 598 yes yes 2 2.4179E-24 247.96 By MS/MS 4 0 1 1 555960 555960 0 1574 1821 1630 3992 2867 2867 1 15177 0 ASVEDADTQSK LQSVLGKVNEIAKHKASVEDADTQSKVHQL AKHKASVEDADTQSKVHQLYETIQRWSPIA K A S S K V 2 0 0 2 0 1 1 0 0 0 0 1 0 0 0 2 1 0 0 1 0 0 11 0 1149.515 Q13561 Q13561 298 308 DCTN2 Dynactin subunit 2 yes yes 2 1.8844E-17 232.72 By MS/MS By MS/MS 6 0 2 1 1 3177000 3152800 24214 1575 1382 1631 3993;3994 2868;2869 2869 2 24586 74263 ASVFVLDTVR AHKALFGIFIPSQRRASVFVLDTVRSNQMP PSQRRASVFVLDTVRSNQMPSLGALYSAEH R A S V R S 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 3 0 0 10 0 1105.6132 Q07864 Q07864 1510 1519 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.00023296 155.42 By MS/MS 2.5 1.12 1 1 1 1 4 395150 395150 0 1576 1283 1632 3995;3996;3997;3998 2870 2870 1 16610 0 ASVGECPAPVPVK ______________________________ ______________________________ M A S V K D 2 0 0 0 1 0 1 1 0 0 0 1 0 0 3 1 0 0 0 3 0 0 13 0 1309.67 P56134 P56134 2 14 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.000892 117.7 By MS/MS 10 0 1 1 1622600 1622600 0 1577 1041 1633 3999 2871 2871 1 1724700 0 ASVGECPAPVPVKDK ______________________________ ASVGECPAPVPVKDKKLLEVKLGELPSWIL M A S D K K 2 0 0 1 1 0 1 1 0 0 0 2 0 0 3 1 0 0 0 3 0 0 15 1 1552.7919 P56134 P56134 2 16 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 1.3034E-09 188.27 By MS/MS By matching 10 0 2 1 1 2503600 2475400 28248 1578 1041 1634 4000;4001 2872 2872 1 2631100 724530 ASVGECPAPVPVKDKK ______________________________ SVGECPAPVPVKDKKLLEVKLGELPSWILM M A S K K L 2 0 0 1 1 0 1 1 0 0 0 3 0 0 3 1 0 0 0 3 0 0 16 2 1680.8869 P56134 P56134 2 17 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2;3 0.00020988 160.22 By MS/MS 10 0 2 2 3562800 3562800 0 1579 1041 1635 4002;4003 2873;2874;2875 2875 3 3786900 0 ASVITQVFHVPLEER QEPSGAWGNKIRPIKASVITQVFHVPLEER ASVITQVFHVPLEERKYKDMNQFGEGEQAK K A S E R K 1 1 0 0 0 1 2 0 1 1 1 0 0 1 1 1 1 0 0 3 0 0 15 0 1723.9257 Q00341 Q00341 73 87 HDLBP Vigilin yes yes 3 0.016686 75.764 By MS/MS 3.5 0.5 1 1 2 606050 606050 0 1580 1231 1636 4004;4005 2876 2876 1 15931 0 ASVLFANEK AIVIDPKNPLCKFHRASVLFANEKYKSALQ LCKFHRASVLFANEKYKSALQELEELKQIV R A S E K Y 2 0 1 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 9 0 977.5182 P30260 P30260 710 718 CDC27 Cell division cycle protein 27 homolog yes yes 2 0.0024319 125.16 By MS/MS 3.5 0.5 1 1 2 1068800 1068800 0 1581 739 1637 4006;4007 2877 2877 1 29086 0 ASVPTIQDQASAMQLSQCAK QSFLQPGGKMVAAAKASVPTIQDQASAMQL IQDQASAMQLSQCAKNLGTALAELRTAAQK K A S A K N 4 0 0 1 1 4 0 0 0 1 1 1 1 0 1 3 1 0 0 1 0 0 20 0 2133.0194 Q9Y490 Q9Y490 1006 1025 TLN1 Talin-1 yes yes 2 1.7122E-12 164.15 By MS/MS 2.5 0.5 1 1 2 494800 494800 0 1582 2947 1638 4008;4009 2878 2878 1690 1 20553 0 ASVQDFEK LVSIPDEIFCEEIAKASVQDFEKFLKTL__ FCEEIAKASVQDFEKFLKTL__________ K A S E K F 1 0 0 1 0 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 8 0 922.43961 Q96E29 Q96E29 405 412 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 0.005627 134.77 By MS/MS By matching 7.33 0.471 2 1 2 1 3580400 3561200 19267 1583 2158 1639 4010;4011;4012 2879 2879 1 74212 79095 ASVTNDSGPR ASKSNVTSFQRRGPRASVTNDSGPRLVSIA RRGPRASVTNDSGPRLVSIAGTRPSVRNGQ R A S P R L 1 1 1 1 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 1 0 0 10 0 1002.473 Q96EB1 Q96EB1 36 45 ELP4 Elongator complex protein 4 yes yes 2 0.000694 137.05 By MS/MS 7 0 1 1 573330 573330 0 1584 2161 1640 4013 2880 2880 1 10246 0 ASWEERDR ERFIVVREPSGTLRKASWEERDRMIQVYFP PSGTLRKASWEERDRMIQVYFPKEGRKILT K A S D R M 1 2 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 8 1 1047.4734 P82650 P82650 184 191 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.041478 134.81 By MS/MS 7 0 1 1 1182800 1182800 0 1585 1201 1641 4014 2881 2881 1 21136 0 ASWSSLSMDEKVELYR KHLSASQKALKEKEKASWSSLSMDEKVELY SWSSLSMDEKVELYRIKFKESFAEMNRGSN K A S Y R I 1 1 0 1 0 0 2 0 0 0 2 1 1 0 0 4 0 1 1 1 0 0 16 1 1899.9037 P13073 P13073 68 83 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 3 0.0031784 99.161 By MS/MS 10 0 1 1 318810 318810 0 1586 571 1642 4015 2882 2882 358 1 338860 0 ASWTNASK DFSPEQLDHLFDCFKASWTNASKKQREKLL HLFDCFKASWTNASKKQREKLLELIRRLAE K A S S K K 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 2 1 1 0 0 0 0 8 0 863.41373 Q93008;O00507 Q93008 474 481 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.031635 104.06 By MS/MS 2 0 1 1 0 0 0 1587 2096 1643 4016 2883 2883 1 0 0 ASYDTLCVLDGDKDSVNCAR VIHEDFIQSCFDRLKASYDTLCVLDGDKDS LCVLDGDKDSVNCARQEAVRMVRVLTVLRE K A S A R Q 2 1 1 4 2 0 0 1 0 0 2 1 0 0 0 2 1 0 1 2 0 0 20 1 2257.9943 Q93008 Q93008 825 844 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.029397 56.424 By MS/MS 2.5 1.12 1 1 1 1 4 1008400 1008400 0 1588 2096 1644 4017;4018;4019;4020 2884 2884 1 37273 0 ASYVAPLTAQPATYR FFGRDRSPLRRSPPRASYVAPLTAQPATYR ASYVAPLTAQPATYRAQPSVSLGAAYRAQP R A S Y R A 4 1 0 0 0 1 0 0 0 0 1 0 0 0 2 1 2 0 2 1 0 0 15 0 1607.8308 Q96PK6 Q96PK6 224 238 RBM14 RNA-binding protein 14 yes yes 2 0.00010542 136.38 By MS/MS 5 0 1 1 963260 963260 0 1589 2238 1645 4021 2885 2885 1 39594 0 ATAAELLR GKTVLITGANSGLGRATAAELLRLGARVIM ANSGLGRATAAELLRLGARVIMGCRDRARA R A T L R L 3 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 843.48142 Q9HBH5 Q9HBH5 58 65 RDH14 Retinol dehydrogenase 14 yes yes 2 0.017402 110.12 By MS/MS 9 0.816 1 1 1 3 3860500 3860500 0 1590 2552 1646 4022;4023;4024 2886 2886 1 334930 0 ATAAPAGAPPQPQDLEFTK SFSRFYSLKVAPKVKATAAPAGAPPQPQDL PAGAPPQPQDLEFTKLPNGLVIASLENYSP K A T T K L 5 0 0 1 0 2 1 1 0 0 1 1 0 1 4 0 2 0 0 0 0 0 19 0 1908.9581 P22695 P22695 24 42 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 7.3108E-08 153.94 By MS/MS 7 0 1 1 3675300 3675300 0 1591 662 1647 4025 2887 2887 1 65678 0 ATAATEEPFPFHGLLPK ______________________________ AATEEPFPFHGLLPKKETGAASFLCRYPEY M A T P K K 3 0 0 0 0 0 2 1 1 0 2 1 0 2 3 0 2 0 0 0 0 0 17 0 1824.941 P29144 P29144 2 18 TPP2 Tripeptidyl-peptidase 2 yes yes 2 0.0014975 108.56 By MS/MS 3 0 1 1 99473 99473 0 1592 723 1648 4026 2888 2888 1 2596.7 0 ATAATSPALKR ______________________________ ______________________________ M A T K R L 4 1 0 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 0 0 11 1 1085.6193 Q8WTW3 Q8WTW3 2 12 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.013106 122.33 By MS/MS By matching 4 0 2 1 1 2036700 1988800 47894 1593 2010 1649 4027;4028 2889 2889 1 54292 100080 ATAAYEQLK ______________________________ ______________________________ M A T L K L 3 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 0 993.51311 Q9NTJ5 Q9NTJ5 2 10 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.012656 88.948 By MS/MS 2.5 1.12 1 1 1 1 4 3901300 3901300 0 1594 2631 1650 4029;4030;4031;4032 2890;2891 2890 2 162270 0 ATAEALLALPVLR RSVLVMMLEPDPKLRATAEALLALPVLRQP LRATAEALLALPVLRQPRAWGVLWCMAAEA R A T L R Q 4 1 0 0 0 0 1 0 0 0 4 0 0 0 1 0 1 0 0 1 0 0 13 0 1336.8078 Q99640 Q99640 348 360 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase yes yes 2 0.00078705 133.99 By MS/MS 6 0 1 1 1279000 1279000 0 1595 2280 1651 4033 2892 2892 1 9973.4 0 ATAEQISSQTGNK GAQCVIASRKMDVLKATAEQISSQTGNKVH LKATAEQISSQTGNKVHAIQCDVRDPDMVQ K A T N K V 2 0 1 0 0 2 1 1 0 1 0 1 0 0 0 2 2 0 0 0 0 0 13 0 1333.6474 Q16698 Q16698 98 110 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 2 2.8905E-46 284.1 By MS/MS 8 0 1 1 1059900 1059900 0 1596 1543 1652 4034 2893 2893 1 69923 0 ATAEVLNIGK ______________________________ ______________________________ M A T G K K 2 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P22234 P22234 2 11 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 2.9542E-07 185.6 By MS/MS 6.5 1.12 1 1 1 1 4 9438000 9438000 0 1597 656 1653 4035;4036;4037;4038 2894 2894 1 171290 0 ATAEVLNIGKK ______________________________ ______________________________ M A T K K L 2 0 1 0 0 0 1 1 0 1 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1142.6659 P22234 P22234 2 12 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 1.385E-21 239.6 By MS/MS By MS/MS 6.22 2.82 1 1 2 2 1 1 1 7 2 123440000 123290000 154090 1598 656 1654 4039;4040;4041;4042;4043;4044;4045;4046;4047 2895;2896;2897;2898;2899;2900;2901;2902 2902 6 6958400 604220 ATAFNEQVDK KLFSLELVDESGEIRATAFNEQVDKFFPLI SGEIRATAFNEQVDKFFPLIEVNKVYYFSK R A T D K F 2 0 1 1 0 1 1 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 10 0 1121.5353 P27694 P27694 235 244 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.023853 89.679 By MS/MS 5 0 1 1 428600 428600 0 1599 708 1655 4048 2903 2903 1 17617 0 ATAGAYIASQTVK AFKFRHGVIVAADSRATAGAYIASQTVKKV SRATAGAYIASQTVKKVIEINPYLLGTMAG R A T V K K 4 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 2 0 1 1 0 0 13 0 1279.6772 P28074 P28074 79 91 PSMB5 Proteasome subunit beta type-5 yes yes 2 2.4974E-12 211.46 By MS/MS By matching 9.33 0.471 2 1 2 1 11245000 11192000 53318 1600 715 1656 4049;4050;4051 2904 2904 1 6475100 574620 ATAGAYIASQTVKK AFKFRHGVIVAADSRATAGAYIASQTVKKV RATAGAYIASQTVKKVIEINPYLLGTMAGG R A T K K V 4 0 0 0 0 1 0 1 0 1 0 2 0 0 0 1 2 0 1 1 0 0 14 1 1407.7722 P28074 P28074 79 92 PSMB5 Proteasome subunit beta type-5 yes yes 2 4.2063E-05 167.71 By MS/MS 9 0 1 1 561420 561420 0 1601 715 1657 4052 2905 2905 1 322200 0 ATAGDTHLGGEDFDNR DVSILTIDDGIFEVKATAGDTHLGGEDFDN TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 P0DMV9;P0DMV8;P17066;P48741 P0DMV9 221 236 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2;3 7.2973E-29 240.65 By MS/MS By matching 6.33 1.15 3 2 2 2 8 1 50677000 50563000 114260 1602 528;611 1658 4053;4054;4055;4056;4057;4058;4059;4060;4061 2906;2907;2908 2907 2 1831600 338090 ATALIEDIFAR DPLVTNYTVVDFRNRATALIEDIFARDKIP FRNRATALIEDIFARDKIPIVVGGTNYYIE R A T A R D 3 1 0 1 0 0 1 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 11 0 1218.6608 Q9H3H1 Q9H3H1 102 112 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 2 4.7118E-05 192.26 By MS/MS 6 0 1 1 513820 513820 0 1603 2486 1659 4062 2909 2909 1 4006.8 0 ATAPVPTVGEGYGYGHESELSQASAAAR ASTSYYGRDRSPLRRATAPVPTVGEGYGYG YGHESELSQASAAARNSLYDMARYEREQYA R A T A R N 6 1 0 0 0 1 3 4 1 0 1 0 0 0 2 3 2 0 2 2 0 0 28 0 2775.31 Q9BWF3 Q9BWF3 314 341 RBM4 RNA-binding protein 4 yes yes 3 0.034274 40.104 By MS/MS 7 0 1 1 1944700 1944700 0 1604 2392 1660 4063 2910 2910 1 34752 0 ATAVMPDGQFKDISLSDYK SSGNAKIGHPAPNFKATAVMPDGQFKDISL MPDGQFKDISLSDYKGKYVVFFFYPLDFTF K A T Y K G 2 0 0 3 0 1 0 1 0 1 1 2 1 1 1 2 1 0 1 1 0 0 19 1 2085.0089 Q06830 Q06830 17 35 PRDX1 Peroxiredoxin-1 yes yes 3 0.011852 63.691 By MS/MS 9 0 1 1 520330 520330 0 1605 1277 1661 4064 2911 2911 1034 1 298620 0 ATAVVDGAFK ASGNARIGKPAPDFKATAVVDGAFKEVKLS APDFKATAVVDGAFKEVKLSDYKGKYVVLF K A T F K E 3 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 977.5182 P32119 P32119 17 26 PRDX2 Peroxiredoxin-2 yes yes 2 0.00013862 161.27 By MS/MS 9 0 1 1 1000100 1000100 0 1606 763 1662 4065 2912 2912 1 573990 0 ATAVVDGAFKEVK ASGNARIGKPAPDFKATAVVDGAFKEVKLS FKATAVVDGAFKEVKLSDYKGKYVVLFFYP K A T V K L 3 0 0 1 0 0 1 1 0 0 0 2 0 1 0 0 1 0 0 3 0 0 13 1 1333.7242 P32119 P32119 17 29 PRDX2 Peroxiredoxin-2 yes yes 2 1.293E-06 180.66 By MS/MS 9 0 1 1 1424500 1424500 0 1607 763 1663 4066 2913 2913 1 817520 0 ATCAPQHGAPGPGPADASK SLHETSSVFVDSLTKATCAPQHGAPGPGPA PQHGAPGPGPADASKVVAKGLGLSKAYVGQ K A T S K V 5 0 0 1 1 1 0 3 1 0 0 1 0 0 4 1 1 0 0 0 0 0 19 0 1788.8213 P21333 P21333 2541 2559 FLNA Filamin-A yes yes 2;3 0.00094565 112.17 By MS/MS 2.75 0.829 2 1 1 4 1571000 1571000 0 1608 648 1664 4067;4068;4069;4070 2914;2915;2916 2916 3 68045 0 ATCIGNNSAAAVSMLK QLYQSDPSGNYGGWKATCIGNNSAAAVSML TCIGNNSAAAVSMLKQDYKEGEMTLKSALA K A T L K Q 4 0 2 0 1 0 0 1 0 1 1 1 1 0 0 2 1 0 0 1 0 0 16 0 1606.7807 P25789 P25789 161 176 PSMA4 Proteasome subunit alpha type-4 yes yes 2 6.8689E-21 217.12 By MS/MS 8 0 1 1 1899400 1899400 0 1609 691 1665 4071 2917 2917 465 1 125300 0 ATDCVGHDVVTLLR SLDAGILITWTKGFKATDCVGHDVVTLLRD KATDCVGHDVVTLLRDAIKRREEFDLDVVA K A T L R D 1 1 0 2 1 0 0 1 1 0 2 0 0 0 0 0 2 0 0 3 0 0 14 0 1554.7824 P19367 P19367 625 638 HK1 Hexokinase-1 yes yes 2;3 0.00032986 148.78 By MS/MS 4 0 2 2 3598800 3598800 0 1610 630 1666 4072;4073 2918;2919 2918 2 98244 0 ATDFDVLSYK KKIKVGEFFSHVVWKATDFDVLSYKKTMLH HVVWKATDFDVLSYKKTMLHLTDIQLQDNK K A T Y K K 1 0 0 2 0 0 0 0 0 0 1 1 0 1 0 1 1 0 1 1 0 0 10 0 1157.5605 Q9NTJ5 Q9NTJ5 92 101 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0019183 117.53 By MS/MS 1.5 0.5 1 1 2 345760 345760 0 1611 2631 1667 4074;4075 2920 2920 1 16931 0 ATDFVADR KPITIGRHAHGDQYKATDFVADRAGTFKMV AHGDQYKATDFVADRAGTFKMVFTPKDGSG K A T D R A 2 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 893.4243 P48735 P48735 181 188 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 0.0034533 146.58 By MS/MS 5.5 1.12 1 1 1 1 4 2889400 2889400 0 1612 912 1668 4076;4077;4078;4079 2921 2921 1 50638 0 ATDILPK SSVALYSRKVLIQTKATDILPKWLRFIRGV RKVLIQTKATDILPKWLRFIRGVVDSEDIP K A T P K W 1 0 0 1 0 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 7 0 756.43815 Q12931 Q12931 376 382 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.047712 102.71 By MS/MS 5 0 1 1 1436700 1436700 0 1613 1316 1669 4080 2922 2922 1 59054 0 ATDLGGTSQAGTSQR LGSQDRARPPSGSSKATDLGGTSQAGTSQR ATDLGGTSQAGTSQRFLENGSQEDLLHGNP K A T Q R F 2 1 0 1 0 2 0 3 0 0 1 0 0 0 0 2 3 0 0 0 0 0 15 0 1448.6855 Q7Z2W4 Q7Z2W4 315 329 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 6.9073E-77 310.34 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 10599000 10599000 0 1614 1777 1670 4081;4082;4083;4084;4085;4086;4087;4088 2923;2924;2925;2926 2924 4 302940 0 ATDPSQVPDVISSIR QPDDPESQMACHVFRATDPSQVPDVISSIR ATDPSQVPDVISSIRQLSKAAMKEDAKPSK R A T I R Q 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1583.8155 O60343 O60343 161 175 TBC1D4 TBC1 domain family member 4 yes yes 2 3.7077E-14 197.36 By MS/MS 3.5 0.5 1 1 2 2351200 2351200 0 1615 246 1671 4089;4090 2927 2927 1 61485 0 ATDTINSQGQFPSYLETVTK MRLKLFSILSTVLLRATDTINSQGQFPSYL NSQGQFPSYLETVTKDILAPNLQWHAGRTA R A T T K D 1 0 1 1 0 2 1 1 0 1 1 1 0 1 1 2 4 0 1 1 0 0 20 0 2199.0695 Q86Y56 Q86Y56 636 655 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 1.3121E-31 228.11 By MS/MS 4.5 0.5 1 1 2 919930 919930 0 1616 1844 1672 4091;4092 2928;2929 2929 2 31859 0 ATDVMIAGK NLYGCRESLIDGIKRATDVMIAGKVAVVAG IDGIKRATDVMIAGKVAVVAGYGDVGKGCA R A T G K V 2 0 0 1 0 0 0 1 0 1 0 1 1 0 0 0 1 0 0 1 0 0 9 0 904.4688 P23526 P23526 206 214 AHCY Adenosylhomocysteinase yes yes 2 0.0001897 176.09 By MS/MS 7 0 1 1 0 0 0 1617 670 1673 4093 2930 2930 450 1 0 0 ATELLTLLK SSTHSEEGAEAIRTRATELLTLLKMPSVAQ EAIRTRATELLTLLKMPSVAQFVLTPSTEV R A T L K M 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 2 0 0 0 0 0 9 0 1000.6168 O43299 O43299 751 759 AP5Z1 AP-5 complex subunit zeta-1 yes yes 2 0.012305 109.71 By MS/MS 5 0 1 1 0 0 0 1618 191 1674 4094 2931 2931 1 0 0 ATENDIYNFFSPLNPMR STTGHCVHMRGLPYRATENDIYNFFSPLNP ENDIYNFFSPLNPMRVHIEIGPDGRVTGEA R A T M R V 1 1 3 1 0 0 1 0 0 1 1 0 1 2 2 1 1 0 1 0 0 0 17 0 2027.9411 P55795 P55795 300 316 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 2 0.00031592 121.45 By MS/MS 6 0 1 1 436120 436120 0 1619 1037 1675 4095 2932 2932 806 1 3400.8 0 ATENDIYNFFSPLNPVR STTGHCVHMRGLPYRATENDIYNFFSPLNP ENDIYNFFSPLNPVRVHIEIGPDGRVTGEA R A T V R V 1 1 3 1 0 0 1 0 0 1 1 0 0 2 2 1 1 0 1 1 0 0 17 0 1995.969 P31943;P52597 P31943 300 316 HNRNPH1;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 2;3 1.6675E-43 262.48 By MS/MS 6 0 2 2 7189700 7189700 0 1620 758;988 1676 4096;4097 2933;2934;2935 2933 3 56066 0 ATENPEQVASEGLPEPVLR TGSQGLSSLAEEAARATENPEQVASEGLPE PEQVASEGLPEPVLRKVELPVPTHRRPVQA R A T L R K 2 1 1 0 0 1 4 1 0 0 2 0 0 0 3 1 1 0 0 2 0 0 19 0 2035.0222 Q9BYD3 Q9BYD3 31 49 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 4.0852E-34 238.65 By MS/MS By matching 8.33 0.471 2 1 2 1 8889600 8849500 40129 1621 2414 1677 4098;4099;4100 2936;2937 2936 2 791480 342350 ATEPASPLVPFLQK NHLLIIFIDDSPPEKATEPASPLVPFLQKF KATEPASPLVPFLQKFAEPRNKKPSVLKLE K A T Q K F 2 0 0 0 0 1 1 0 0 0 2 1 0 1 3 1 1 0 0 1 0 0 14 0 1496.8239 Q9Y5W7 Q9Y5W7 308 321 SNX14 Sorting nexin-14 yes yes 2 0.0051582 103.31 By MS/MS 4.5 0.5 1 1 2 868390 868390 0 1622 2983 1678 4101;4102 2938 2938 1 28049 0 ATEPPSPDAGELSLASR SQARRTRGTKALGSKATEPPSPDAGELSLA EPPSPDAGELSLASRLVQQGLLTPDMLKQL K A T S R L 3 1 0 1 0 0 2 1 0 0 2 0 0 0 3 3 1 0 0 0 0 0 17 0 1696.8268 Q8IYB8 Q8IYB8 720 736 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00024287 132.97 By MS/MS 5.5 1.12 1 1 1 1 4 8984800 8984800 0 1623 1879 1679 4103;4104;4105;4106 2939 2939 1 229450 0 ATEQLQIVLR LLRELLLPDTERIRRATEQLQIVLRAPAAL ERIRRATEQLQIVLRAPAALPALCDLLASA R A T L R A 1 1 0 0 0 2 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1169.6768 Q8TEX9 Q8TEX9 24 33 IPO4 Importin-4 yes yes 2 0.00093175 148.69 By MS/MS 4 0 1 1 953310 953310 0 1624 2005 1680 4107 2940 2940 1 26024 0 ATETDKEPQR LLPEADSKKLPSPARATETDKEPQRLLVPD PSPARATETDKEPQRLLVPDIQEIRVSPIV R A T Q R L 1 1 0 1 0 1 2 0 0 0 0 1 0 0 1 0 2 0 0 0 0 0 10 1 1173.5626 Q12756 Q12756 1552 1561 KIF1A Kinesin-like protein KIF1A yes yes 2 0.020979 114.51 By MS/MS 2 0 1 1 86470 86470 0 1625 1302 1681 4108 2941 2941 1 4298 0 ATEVLSAVLK AIHVVVLLLRGLSQKATEVLSAVLKDLYHL GLSQKATEVLSAVLKDLYHLLKHVVCLEPD K A T L K D 2 0 0 0 0 0 1 0 0 0 2 1 0 0 0 1 1 0 0 2 0 0 10 0 1029.607 Q9C0B7 Q9C0B7 1034 1043 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 2 0.035027 82.452 By MS/MS 4 0 1 1 240170 240170 0 1626 2432 1682 4109 2942 2942 1 6556.3 0 ATEVSKTPEAR VSEDVKVSKASGVSKATEVSKTPEAREAPA GVSKATEVSKTPEAREAPATQASSTTQLTD K A T A R E 2 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 11 1 1187.6146 Q9UNF1 Q9UNF1 66 76 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.0038453 141.91 By MS/MS 5 0 1 1 876780 876780 0 1627 2840 1683 4110 2943 2943 1 36039 0 ATFDAISK TSARGCTATLGNFAKATFDAISKTYSYLTP TLGNFAKATFDAISKTYSYLTPDLWKETVF K A T S K T 2 0 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 8 0 851.43888 P15880 P15880 239 246 RPS2 40S ribosomal protein S2 yes yes 2 0.00024648 190.26 By MS/MS 8.5 0.5 1 1 2 19067000 19067000 0 1628 602 1684 4111;4112 2944 2944 1 1294000 0 ATFLGLTNEK EPYRNAQNPSLHHPRATFLGLTNEKIVLLS LHHPRATFLGLTNEKIVLLSANSIRATVAT R A T E K I 1 0 1 0 0 0 1 1 0 0 2 1 0 1 0 0 2 0 0 0 0 0 10 0 1092.5815 O95071 O95071 414 423 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.00013862 161.27 By MS/MS 3 1.41 1 1 1 1 1 5 3830900 3830900 0 1629 364 1685 4113;4114;4115;4116;4117 2945;2946;2947;2948;2949 2945 5 144380 0 ATFLQTDLLK GLYKTLKAHGFEEIRATFLQTDLLKLLVKK FEEIRATFLQTDLLKLLVKKCSKGTGFSKT R A T L K L 1 0 0 1 0 1 0 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 10 0 1148.6441 O43149 O43149 2373 2382 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.00015639 174.86 By MS/MS 1 0 1 1 0 0 0 1630 182 1686 4118 2950 2950 1 0 0 ATFVSELEAAKK ______________________________ ______________________________ M A T K K N 3 0 0 0 0 0 2 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 12 1 1292.6976 Q96BN2 Q96BN2 2 13 TADA1 Transcriptional adapter 1 yes yes 2 7.2025E-05 171.33 By MS/MS 7.5 0.5 1 1 2 2930100 2930100 0 1631 2129 1687 4119;4120 2951;2952 2952 2 84562 0 ATFYLNVLEQK LKRCVMDDDNEVRDRATFYLNVLEQKQKAL VRDRATFYLNVLEQKQKALNAGYILNGLTV R A T Q K Q 1 0 1 0 0 1 1 0 0 0 2 1 0 1 0 0 1 0 1 1 0 0 11 0 1324.7027 Q9Y678 Q9Y678 528 538 COPG1 Coatomer subunit gamma-1 yes yes 2 8.8112E-07 180.07 By MS/MS 4.5 0.5 1 1 2 673200 673200 0 1632 2996 1688 4121;4122 2953 2953 1 19296 0 ATGDETGAKVER GKLMELHGEGSSSGKATGDETGAKVERADG SGKATGDETGAKVERADGYEPPVQESV___ K A T E R A 2 1 0 1 0 0 2 2 0 0 0 1 0 0 0 0 2 0 0 1 0 0 12 1 1232.5997 P61247 P61247 241 252 RPS3A 40S ribosomal protein S3a yes yes 2 1.4302E-15 222.18 By MS/MS By matching 8 0 2 1 1 3336600 3253700 82900 1633 1094 1689 4123;4124 2954 2954 1 214640 707240 ATGDETGAKVERADGYEPPVQESV GKLMELHGEGSSSGKATGDETGAKVERADG VERADGYEPPVQESV_______________ K A T S V - 3 1 0 2 0 1 4 3 0 0 0 1 0 0 2 1 2 0 1 3 0 0 24 2 2504.1667 P61247 P61247 241 264 RPS3A 40S ribosomal protein S3a yes yes 2;3 0.0007453 94.922 By MS/MS 8 0 2 2 3484300 3484300 0 1634 1094 1690 4125;4126 2955;2956 2956 2 229860 0 ATGDPYYLEVGK PLRPEFAESTYFLYKATGDPYYLEVGKTLI LYKATGDPYYLEVGKTLIENLNKYARVPCG K A T G K T 1 0 0 1 0 0 1 2 0 0 1 1 0 0 1 0 1 0 2 1 0 0 12 0 1311.6347 Q9BZQ6 Q9BZQ6 416 427 EDEM3 ER degradation-enhancing alpha-mannosidase-like protein 3 yes yes 2 0.00038516 143.96 By MS/MS 4 0 1 1 974570 974570 0 1635 2426 1691 4127 2957 2957 1 26605 0 ATGGGLSSVGGGSSTIK SGLGVGGGFSSSSGRATGGGLSSVGGGSST GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ R A T I K Y 1 0 0 0 0 0 0 6 0 1 1 1 0 0 0 4 2 0 0 1 0 0 17 0 1434.7314 P04259 P04259 534 550 KRT6B Keratin, type II cytoskeletal 6B no no 2 2.6021E-10 160.18 By MS/MS 5 1.41 1 1 1 1 1 5 844330 0 844330 1636 449 1692 4128;4129;4130;4131;4132 2958;2959;2960;2961 2958 4 0 1792100 ATGILLYGLASR AATQAQQTLGSTIDKATGILLYGLASRLRD IDKATGILLYGLASRLRDTRRLSFLVSYIA K A T S R L 2 1 0 0 0 0 0 2 0 1 3 0 0 0 0 1 1 0 1 0 0 0 12 0 1233.7081 P47897 P47897 51 62 QARS Glutamine--tRNA ligase yes yes 2 1.6943E-07 190.57 By MS/MS 5 0 1 1 148520 148520 0 1637 896 1693 4133 2962 2962 1 6105 0 ATGSEVSQR TENLRRVEEDIQQQKATGSEVSQRKQQLEV DIQQQKATGSEVSQRKQQLEVELRQVTQMR K A T Q R K 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 9 0 933.45157 P15924 P15924 1435 1443 DSP Desmoplakin yes yes 2 0.00132 137.14 By MS/MS By MS/MS 2 0.707 1 2 1 1 3 231040 134270 96776 1638 603 1694 4134;4135;4136;4137 2963;2964 2964 2 6673.8 97263 ATGSPVSIFVYDVK GGLPGPWALHRGRKKATGSPVSIFVYDVKP KATGSPVSIFVYDVKPGAEEQTQVAKAAFK K A T V K P 1 0 0 1 0 0 0 1 0 1 0 1 0 1 1 2 1 0 1 3 0 0 14 0 1481.7766 Q96KG9 Q96KG9 38 51 SCYL1 N-terminal kinase-like protein yes yes 2 0.00062949 164.48 By MS/MS 3.5 0.5 1 1 2 190950 190950 0 1639 2220 1695 4138;4139 2965 2965 1 5178.6 0 ATGSPVSIFVYDVKPGAEEQTQVAK GGLPGPWALHRGRKKATGSPVSIFVYDVKP YDVKPGAEEQTQVAKAAFKRFKTLRHPNIL K A T A K A 3 0 0 1 0 2 2 2 0 1 0 2 0 1 2 2 2 0 1 4 0 0 25 1 2620.3384 Q96KG9 Q96KG9 38 62 SCYL1 N-terminal kinase-like protein yes yes 3 0.0011975 67.364 By MS/MS 4 0 1 1 1009100 1009100 0 1640 2220 1696 4140 2966 2966 1 27547 0 ATGVDEEDVEVFDSFENMR TSSSKASTLQLGSPRATGVDEEDVEVFDSF DEEDVEVFDSFENMRVFLQLRPEYRVHSYN R A T M R V 1 1 1 3 0 0 4 1 0 0 0 0 1 2 0 1 1 0 0 3 0 0 19 0 2187.9266 Q7L8L6 Q7L8L6 98 116 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.038491 99.834 By MS/MS 5 0 1 1 190670 190670 0 1641 1770 1697 4141 2967 2967 1256 0 7837.3 0 ATGYPLAYVAAK EVNARLSRSSALASKATGYPLAYVAAKLAL ASKATGYPLAYVAAKLALGIPLPELRNSVT K A T A K L 4 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 1 0 2 1 0 0 12 0 1223.655 P27708 P27708 697 708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0018469 140.83 By MS/MS 2 0.816 1 1 1 3 3239000 3239000 0 1642 709 1698 4142;4143;4144 2968;2969 2968 2 145270 0 ATHDGAPELGAGGTR SDVYGANLFHQYLQKATHDGAPELGAGGTR ATHDGAPELGAGGTRQQQPSASQSCISILV K A T T R Q 3 1 0 1 0 0 1 4 1 0 1 0 0 0 1 0 2 0 0 0 0 0 15 0 1408.6695 Q9BXW7 Q9BXW7 332 346 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 3.1771E-14 199.8 By MS/MS By matching 7.33 0.471 2 1 2 1 13149000 13131000 18617 1643 2404 1699 4145;4146;4147 2970 2970 1 245130 76426 ATHGQTCAR ______________________________ ______________________________ M A T A R P 2 1 0 0 1 1 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 9 0 1000.4509 P45880 P45880 2 10 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 1.3818E-06 175.91 By MS/MS 8.5 0.5 1 1 2 1198600 1198600 0 1644 870 1700 4148;4149 2971 2971 1 181350 0 ATHIKLPR YINVKLKAAEEIGIKATHIKLPRTTTESEV AEEIGIKATHIKLPRTTTESEVMKYITSLN K A T P R T 1 1 0 0 0 0 0 0 1 1 1 1 0 0 1 0 1 0 0 0 0 0 8 1 934.57123 P11586 P11586 67 74 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 3 0.019371 94.302 By MS/MS 4 0 1 1 591130 591130 0 1645 556 1701 4150 2972 2972 1 16137 0 ATIEDILFK RTWEILKEDESGSLKATIEDILFKAKRKRV ESGSLKATIEDILFKAKRKRVFEHHGQVRL K A T F K A 1 0 0 1 0 0 1 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1048.5805 Q6P1K8;Q13888 Q6P1K8 32 40 GTF2H2C;GTF2H2 General transcription factor IIH subunit 2-like protein;General transcription factor IIH subunit 2 yes no 2 0.0068242 111.74 By MS/MS 7 0 1 1 544730 544730 0 1646 1401 1702 4151 2973 2973 1 9734.4 0 ATIELCSTHANDASALR LVLDAFALPLTNLFKATIELCSTHANDASA IELCSTHANDASALRILFSSLILISKLFYS K A T L R I 4 1 1 1 1 0 1 0 1 1 2 0 0 0 0 2 2 0 0 0 0 0 17 0 1828.8738 P55060 P55060 190 206 CSE1L Exportin-2 yes yes 3 0.0081406 81.992 By MS/MS 4 0 1 1 1920600 1920600 0 1647 1025 1703 4152 2974 2974 1 52431 0 ATIGADFLTK LMNQYVNKKFSNQYKATIGADFLTKEVMVD SNQYKATIGADFLTKEVMVDDRLVTMQIWD K A T T K E 2 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 2 0 0 0 0 0 10 0 1035.5601 P51149 P51149 39 48 RAB7A Ras-related protein Rab-7a yes yes 2 0.0093772 103.26 By MS/MS 9.5 0.5 1 1 2 2686400 2686400 0 1648 960 1704 4153;4154 2975 2975 1 1579800 0 ATILDLSCNK DLNEVPVKELAALPKATILDLSCNKLTTLP AALPKATILDLSCNKLTTLPSDFCGLTHLV K A T N K L 1 0 1 1 1 0 0 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 0 1133.5751 Q96AG4 Q96AG4 41 50 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.00029365 153.05 By MS/MS By matching 8 0 2 1 1 5252300 5231400 20944 1649 2121 1705 4155;4156 2976 2976 1 345110 178680 ATISLSDSDLLR LLTDGDVHIRDDGRRATISLSDSDLLRLEG GRRATISLSDSDLLRLEGDSRTVRLLKELR R A T L R L 1 1 0 2 0 0 0 0 0 1 3 0 0 0 0 3 1 0 0 0 0 0 12 0 1289.6827 Q7L2E3 Q7L2E3 1116 1127 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 5.082E-33 261.16 By MS/MS By matching 4.67 1.49 2 1 1 1 1 5 1 9156800 9114100 42709 1650 1763 1706 4157;4158;4159;4160;4161;4162 2977;2978 2977 2 239020 61211 ATISNDGATILK GPRGMDKLIVDGRGKATISNDGATILKLLD RGKATISNDGATILKLLDVVHPAAKTLVDI K A T L K L 2 0 1 1 0 0 0 1 0 2 1 1 0 0 0 1 2 0 0 0 0 0 12 0 1202.6507 Q99832 Q99832 56 67 CCT7 T-complex protein 1 subunit eta yes yes 2 3.0318E-11 208.15 By MS/MS By MS/MS 6.5 2.6 1 1 2 1 1 1 1 7 1 193660000 193500000 156050 1651 2295 1707 4163;4164;4165;4166;4167;4168;4169;4170 2979;2980;2981;2982;2983;2984;2985;2986;2987 2983 9 2585900 478590 ATKDGTFVISK QLDVLKEFHKQITARATKDGTFVISKT___ ITARATKDGTFVISKT______________ R A T S K T 1 0 0 1 0 0 0 1 0 1 0 2 0 1 0 1 2 0 0 1 0 0 11 1 1165.6343 Q8WUK0 Q8WUK0 190 200 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.010133 138.76 By MS/MS 9 0 1 1 286910 286910 0 1652 2017 1708 4171 2988 2988 1 164660 0 ATKPQPVNTSSVTVK ESSAATKKLSATIPKATKPQPVNTSSVTVK ATKPQPVNTSSVTVKSNRSSNMTATTKFVS K A T V K S 1 0 1 0 0 1 0 0 0 0 0 2 0 0 2 2 3 0 0 3 0 0 15 1 1555.857 Q8WWK9 Q8WWK9 215 229 CKAP2 Cytoskeleton-associated protein 2 yes yes 3 0.051887 72.662 By MS/MS 5 0 1 1 1457400 1457400 0 1653 2040 1709 4172 2989 2989 1 59904 0 ATLITFLCDR YRGGTPYNNERHTPRATLITFLCDRDAGVG RHTPRATLITFLCDRDAGVGFPEYQEEDNS R A T D R D 1 1 0 1 1 0 0 0 0 1 2 0 0 1 0 0 2 0 0 0 0 0 10 0 1208.6223 P11717 P11717 724 733 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.00065919 138.66 By MS/MS 2.5 0.5 1 1 2 177070 177070 0 1654 557 1710 4173;4174 2990 2990 1 5940.8 0 ATLLSAR AREEASLRTLEGRRRATLLSARQGMMSARG RTLEGRRRATLLSARQGMMSARGDFLNYAL R A T A R Q 2 1 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 7 0 730.43374 O95071 O95071 1901 1907 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.034542 111.82 By MS/MS 2 0.816 1 1 1 3 588170 588170 0 1655 364 1711 4175;4176;4177 2991 2991 1 26229 0 ATLYVTAIEDR RDKWLAPDGLIFPDRATLYVTAIEDRQYKD FPDRATLYVTAIEDRQYKDYKIHWWENVYG R A T D R Q 2 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 2 0 1 1 0 0 11 0 1250.6507 Q99873 Q99873 196 206 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.00011108 180.36 By MS/MS By MS/MS 5.62 2.91 1 1 1 2 2 1 6 2 5377300 5227900 149400 1656 2296 1712 4178;4179;4180;4181;4182;4183;4184;4185 2992;2993;2994;2995 2995 4 224700 818880 ATMQNLNDR SSFGGVDGLLAGGEKATMQNLNDRLASYLD LAGGEKATMQNLNDRLASYLDKVRALEEAN K A T D R L 1 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 9 0 1061.4924 CON__Q04695;Q04695;CON__Q9QWL7;CON__Q9C075;CON__Q99PS0;Q9C075 CON__Q04695 86 94 KRT17;KRT23 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 23 yes no 2 0.022951 89.08 By MS/MS 6 0 1 1 25490 0 25490 + 1657 54 1713 4186 2996 2996 39 1 0 78174 ATNAQFDSPEILR LYQHNLTGILETAVRATNAQFDSPEILRRL VRATNAQFDSPEILRRLDVRLLEVSPGDTG R A T L R R 2 1 1 1 0 1 1 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 13 0 1460.726 Q96CW5 Q96CW5 607 619 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 1.2177E-07 227.36 By MS/MS 4 0 1 1 660310 660310 0 1658 2143 1714 4187 2997 2997 1 18026 0 ATNDEIFSILK GHSVALCLAVAFKSKATNDEIFSILKDVPN FKSKATNDEIFSILKDVPNPNQDDDDDEGF K A T L K D 1 0 1 1 0 0 1 0 0 2 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1249.6554 Q09161 Q09161 512 522 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 2 7.7857E-07 181.87 By MS/MS 5.5 0.5 1 1 2 1466600 1466600 0 1659 1297 1715 4188;4189 2998 2998 1 43691 0 ATNFLAHEK ______________________________ ______________________________ M A T E K I 2 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1029.5243 P29692 P29692 2 10 EEF1D Elongation factor 1-delta yes yes 2 0.00017705 153.97 By MS/MS By matching 8.17 1.07 2 2 1 1 4 2 22652000 22556000 96269 1660 726 1716 4190;4191;4192;4193;4194;4195 2999;3000;3001 3000 3 904170 667280 ATNVCTR TEQEEDEELLTESSKATNVCTRFEDSPSYV ELLTESSKATNVCTRFEDSPSYVKWGKLRD K A T T R F 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 7 0 820.38614 O60264 O60264 161 167 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.046093 103.83 By MS/MS 2.5 0.5 1 1 2 275820 275820 0 1661 240 1717 4196;4197 3002 3002 1 7961.9 0 ATNYNAGDR NWMCLAKWESGYNTRATNYNAGDRSTDYGI SGYNTRATNYNAGDRSTDYGIFQINSRYWC R A T D R S 2 1 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 9 0 980.43117 P61626 P61626 60 68 LYZ Lysozyme C yes yes 2 0.002563 123.75 By MS/MS 6.83 2.91 1 1 1 1 1 1 6 366190 0 366190 1662 1104 1718 4198;4199;4200;4201;4202;4203 3003;3004 3003 2 0 3526800 ATPYNYPVPVR PPLSPYFKYSVMINKATPYNYPVPVRDDGN MINKATPYNYPVPVRDDGNMPDVPSHPQDP K A T V R D 1 1 1 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 2 2 0 0 11 0 1275.6612 O95167 O95167 48 58 NDUFA3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 yes yes 2 0.012255 96.331 By MS/MS 10 0 1 1 378150 378150 0 1663 369 1719 4204 3005 3005 1 401930 0 ATQALVLAPTR TFAISILQQIELDLKATQALVLAPTRELAQ LDLKATQALVLAPTRELAQQIQKVVMALGD K A T T R E 3 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 11 0 1139.6663 P60842 P60842 100 110 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 0.00012478 158.08 By MS/MS By matching 4.82 2.44 1 1 2 2 2 1 1 1 10 1 1266700000 1266600000 39383 1664 1074 1720 4205;4206;4207;4208;4209;4210;4211;4212;4213;4214;4215 3006;3007;3008;3009;3010;3011;3012;3013;3014 3010 9 22171000 120790 ATQALVLAPTRELAQQIQK TFAISILQQIELDLKATQALVLAPTRELAQ LVLAPTRELAQQIQKVVMALGDYMGASCHA K A T Q K V 4 1 0 0 0 4 1 0 0 1 3 1 0 0 1 0 2 0 0 1 0 0 19 1 2078.1848 P60842 P60842 100 118 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 1.0961E-33 247.17 By MS/MS 6 0 2 2 107600000 107600000 0 1665 1074 1721 4216;4217 3015;3016 3016 2 839030 0 ATQCVPK AFCKDLLEVADVLEKATQCVPKEEIKDDNP EVADVLEKATQCVPKEEIKDDNPHLKNLYE K A T P K E 1 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 7 0 802.40072 Q9HAV7 Q9HAV7 121 127 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.025608 116.9 By MS/MS 9 0 1 1 0 0 0 1666 2547 1722 4218 3017 3017 1 0 0 ATQELIPIEDFITPLK EAKERLKRKIRKLEKATQELIPIEDFITPL TQELIPIEDFITPLKFLDKARERPQVELTF K A T L K F 1 0 0 1 0 1 2 0 0 3 2 1 0 1 2 0 2 0 0 0 0 0 16 0 1827.003 Q9NQ50 Q9NQ50 78 93 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 2 0.025504 82.85 By MS/MS 9 0 1 1 170920 170920 0 1667 2585 1723 4219 3018 3018 1 98092 0 ATQQQHDFTLTQTADGR EGSLSARWPVAGQIRATQQQHDFTLTQTAD QQQHDFTLTQTADGRSSFDWLTGSSTDPLV R A T G R S 2 1 0 2 0 4 0 1 1 0 1 0 0 1 0 0 4 0 0 0 0 0 17 0 1916.8977 P78527 P78527 2637 2653 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 4.1916E-25 286.53 By MS/MS By matching 1.88 0.781 3 3 2 6 2 17391000 17335000 55761 1668 1197 1724 4220;4221;4222;4223;4224;4225;4226;4227 3019;3020;3021;3022;3023 3020 5 808180 53407 ATQTQIDAVCCR FFSHILSLASPSHPKATQTQIDAVCCRRCV HPKATQTQIDAVCCRRCVSFILRTTIGGLL K A T C R R 2 1 0 1 2 2 0 0 0 1 0 0 0 0 0 0 2 0 0 1 0 0 12 0 1421.6391 Q86XA9 Q86XA9 341 352 HEATR5A HEAT repeat-containing protein 5A yes yes 2 1.8014E-05 160.77 By MS/MS 2 0 1 1 0 0 0 1669 1838 1725 4228 3024 3024 1 0 0 ATSFLLALEPELEAR AEVVLAHLGGGSTSRATSFLLALEPELEAR ATSFLLALEPELEARLAHLGVQVKGEDEEE R A T A R L 3 1 0 0 0 0 3 0 0 0 4 0 0 1 1 1 1 0 0 0 0 0 15 0 1658.8879 P04843 P04843 66 80 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.00051822 132.32 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 2672600 2672600 0 1670 458 1726 4229;4230;4231;4232;4233;4234 3025;3026;3027 3027 3 56124 0 ATSILEFYR ATLSVGGKTVSRFRKATSILEFYRELGLPP VSRFRKATSILEFYRELGLPPKQTVKIFNI K A T Y R E 1 1 0 0 0 0 1 0 0 1 1 0 0 1 0 1 1 0 1 0 0 0 9 0 1098.571 P09001 P09001 158 166 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.00034853 156.75 By MS/MS 8 0 1 1 1979500 1979500 0 1671 510 1727 4235 3028 3028 1 130590 0 ATSLGRPEEEEDELAHR HVQRAEMLPKTSGTRATSLGRPEEEEDELA SLGRPEEEEDELAHRCSSFMAPPVTDLGEL R A T H R C 2 2 0 1 0 0 5 1 1 0 2 0 0 0 1 1 1 0 0 0 0 0 17 1 1937.9079 P36551 P36551 110 126 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 3 0.00090741 115.31 By MS/MS 8 0 1 1 791550 791550 0 1672 807 1728 4236 3029 3029 1 52219 0 ATSQSLVILDELGR TFMEELTDTAEIIRKATSQSLVILDELGRG KATSQSLVILDELGRGTSTHDGIAIAYATL K A T G R G 1 1 0 1 0 1 1 1 0 1 3 0 0 0 0 2 1 0 0 1 0 0 14 0 1500.8148 P20585 P20585 966 979 MSH3 DNA mismatch repair protein Msh3 yes yes 2 4.4856E-08 186.76 By MS/MS 3 0 1 1 193280 193280 0 1673 642 1729 4237 3030 3030 1 5045.5 0 ATSTATSGFAGAIGQK KIDSEGGVSANHTSRATSTATSGFAGAIGQ TSTATSGFAGAIGQKLPPFSYAYTELEAIM R A T Q K L 4 0 0 0 0 1 0 3 0 1 0 1 0 1 0 2 3 0 0 0 0 0 16 0 1466.7365 P51659 P51659 316 331 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 2 0.00016812 156.01 By MS/MS By matching 6.67 0.471 1 2 1 2 1178300 1088100 90222 1674 974 1730 4238;4239;4240 3031 3031 1 19444 332500 ATSVLCCLR ______________________________ ______________________________ M A T L R C 1 1 0 0 2 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 1078.5263 Q5W111 Q5W111 2 10 SPRYD7 SPRY domain-containing protein 7 yes yes 2 0.0041409 102.51 By MS/MS 9 0 1 1 102560 102560 0 1675 1663 1731 4241 3032 3032 1 58863 0 ATTAAPAGGAR ______________________________ ______________________________ M A T A R N 5 1 0 0 0 0 0 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 11 0 942.48829 Q9GZM5 Q9GZM5 2 12 YIPF3 Protein YIPF3;Protein YIPF3, 36 kDa form III yes yes 2 0.056862 56.729 By MS/MS 2 0.816 1 1 1 3 340590 340590 0 1676 2439 1732 4242;4243;4244 3033 3033 1 15483 0 ATTADGSSILDR NQLQEFAAMLMPHQKATTADGSSILDRAVI HQKATTADGSSILDRAVIEHNLLSASKLYN K A T D R A 2 1 0 2 0 0 0 1 0 1 1 0 0 0 0 2 2 0 0 0 0 0 12 0 1205.5888 Q9BT78 Q9BT78 291 302 COPS4 COP9 signalosome complex subunit 4 yes yes 2 4.4864E-07 182.28 By MS/MS 7.5 0.5 1 1 2 7696600 7696600 0 1677 2347 1733 4245;4246 3034 3034 1 149510 0 ATTENLLNLVDQEER VIPNPTTVFKITVGRATTENLLNLVDQEER ATTENLLNLVDQEERSAAPEPIQPISVIPG R A T E R S 1 1 2 1 0 1 3 0 0 0 3 0 0 0 0 0 2 0 0 1 0 0 15 0 1743.8639 Q8N5C8 Q8N5C8 462 476 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 yes yes 2 0.0018586 115.8 By MS/MS 5 0 1 1 427310 427310 0 1678 1919 1734 4247 3035 3035 1 17564 0 ATTSGSNSISVR AQQETGEREASCRDKATTSGSNSISVRAFL RDKATTSGSNSISVRAFLDEDDMSLEEIKN K A T V R A 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 4 2 0 0 1 0 0 12 0 1178.5891 Q86XL3 Q86XL3 627 638 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0013897 128.88 By MS/MS 4.5 0.5 1 1 2 914510 914510 0 1679 1841 1735 4248;4249 3036 3036 1 25583 0 ATVATENNK LTNEKIVLLSANSIRATVATENNKVATWVD SANSIRATVATENNKVATWVDETLSSVASK R A T N K V 2 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 1 0 0 9 0 946.47197 O95071 O95071 434 442 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 2.8382E-06 185.55 By MS/MS 1.5 0.5 1 1 2 507150 507150 0 1680 364 1736 4250;4251 3037;3038 3037 2 25008 0 ATVEPETTPTPNPPTTEEEK ______________________________ ETTPTPNPPTTEEEKTESNQEVANPEHYIK M A T E K T 1 0 1 0 0 0 5 0 0 0 0 1 0 0 5 0 6 0 0 1 0 0 20 0 2167.0168 P06730 P06730 2 21 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 0.00092451 87.863 By MS/MS 9 0 1 1 670270 670270 0 1681 481 1737 4252 3039;3040 3039 2 384670 0 ATVESHESSLILPPIK HLYHMLFELFKNAMRATVESHESSLILPPI TVESHESSLILPPIKVMVALGEEDLSIKMS R A T I K V 1 0 0 0 0 0 2 0 1 2 2 1 0 0 2 3 1 0 0 1 0 0 16 0 1719.9407 Q15119 Q15119 259 274 PDK2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes yes 3 0.019974 71.529 By MS/MS 7 0 1 1 951990 951990 0 1682 1480 1738 4253 3041 3041 1 17012 0 ATVFLNPAACK VFGNQLIPPNAQVKKATVFLNPAACKGKAR QVKKATVFLNPAACKGKARTLFEKNAAPIL K A T C K G 3 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 11 0 1190.6118 Q53H12 Q53H12 63 73 AGK Acylglycerol kinase, mitochondrial yes yes 2 7.1961E-05 166.07 By MS/MS 7.5 0.5 1 1 2 14336000 14336000 0 1683 1587 1739 4254;4255 3042 3042 1 270160 0 ATVLESEGTR KESMQMQVEAERRKRATVLESEGTRESAIN ERRKRATVLESEGTRESAINVAEGKKQAQI R A T T R E 1 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1061.5353 Q9UJZ1 Q9UJZ1 202 211 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 1.1317E-11 213.53 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 5590700 5463100 127610 1684 2806 1740 4256;4257;4258 3043;3044 3044 2 105940 523860 ATVLESEGTRESAINVAEGK KESMQMQVEAERRKRATVLESEGTRESAIN SEGTRESAINVAEGKKQAQILASEAEKAEQ R A T G K K 3 1 1 0 0 0 4 2 0 1 1 1 0 0 0 2 2 0 0 2 0 0 20 1 2060.0386 Q9UJZ1 Q9UJZ1 202 221 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 0.025075 57.985 By MS/MS 7 0 1 1 1231900 1231900 0 1685 2806 1741 4259 3045 3045 1 22015 0 ATVLESEGTRESAINVAEGKK KESMQMQVEAERRKRATVLESEGTRESAIN EGTRESAINVAEGKKQAQILASEAEKAEQI R A T K K Q 3 1 1 0 0 0 4 2 0 1 1 2 0 0 0 2 2 0 0 2 0 0 21 2 2188.1335 Q9UJZ1 Q9UJZ1 202 222 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 0.0065072 71.592 By MS/MS 7 0 1 1 3812200 3812200 0 1686 2806 1742 4260 3046 3046 1 68124 0 ATVLTTER LVGMTPEIIQKLQDKATVLTTERKKRGKTV IQKLQDKATVLTTERKKRGKTVPEELVKPE K A T E R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 3 0 0 1 0 0 8 0 889.4869 Q9UMS4 Q9UMS4 180 187 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.0084904 124.08 By MS/MS 6 0 1 1 5260600 5260600 0 1687 2834 1743 4261 3047 3047 1 41022 0 ATVNQDTR DDAVRPEAEGEEEGRATVNQDTRLDNRVID EGEEEGRATVNQDTRLDNRVIDLRTSTSQA R A T T R L 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 903.44101 P14868 P14868 172 179 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.001393 166.52 By MS/MS 3 2.16 1 1 1 3 553030 553030 0 1688 594 1744 4262;4263;4264 3048;3049;3050 3048 3 27162 0 ATVNTFGYIAK ELLELLKAHKKAIRRATVNTFGYIAKAIGP AIRRATVNTFGYIAKAIGPHDVLATLLNNL R A T A K A 2 0 1 0 0 0 0 1 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1183.6237 O75533 O75533 1076 1086 SF3B1 Splicing factor 3B subunit 1 yes yes 2 7.9569E-11 205.59 By MS/MS 3 0 1 1 2317300 2317300 0 1689 315 1745 4265 3051 3051 1 60492 0 ATVPLQSNVIEAAPDMK ILVDLLTLAHLHVSRATVPLQSNVIEAAPD VPLQSNVIEAAPDMKRESEKEWYFGNADKE R A T M K R 3 0 1 1 0 1 1 0 0 1 1 1 1 0 2 1 1 0 0 2 0 0 17 0 1782.9186 O75165 O75165 953 969 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0057913 95.651 By MS/MS 2 0 1 1 605480 605480 0 1690 287 1746 4266 3052 3052 157 1 30096 0 ATVQQLEGR ______________________________ ______________________________ M A T G R W 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5302 Q01469 Q01469 2 10 FABP5 Fatty acid-binding protein, epidermal yes yes 2 9.6517E-05 160.36 By MS/MS By MS/MS 5.11 3 1 1 1 1 2 1 2 2 7 2050500 1103200 947290 1691 1242 1747 4267;4268;4269;4270;4271;4272;4273;4274;4275 3053;3054;3055;3056;3057;3058;3059;3060 3060 8 787610 4743400 ATVQSVLLDSAGK TIPVIQRAGGAVLTKATVQSVLLDSAGKAC TKATVQSVLLDSAGKACGVSVKKGHELVNI K A T G K A 2 0 0 1 0 1 0 1 0 0 2 1 0 0 0 2 1 0 0 2 0 0 13 0 1287.7034 Q6NUM9 Q6NUM9 318 330 RETSAT All-trans-retinol 13,14-reductase yes yes 2 0.00087884 132.86 By MS/MS 6 0 1 1 3285100 3285100 0 1692 1691 1748 4276 3061 3061 1 25617 0 ATVTATTKVPEIR ______________________________ ______________________________ M A T I R D 2 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 4 0 0 2 0 0 13 1 1385.7878 Q9Y230 Q9Y230 2 14 RUVBL2 RuvB-like 2 yes yes 2 0.048875 56.087 By MS/MS 7.8 1.72 1 1 1 1 1 5 1501100 1501100 0 1693 2864 1749 4277;4278;4279;4280;4281 3062 3062 0 246510 0 ATYLEFIQQNEER ______________________________ ______________________________ M A T E R D 1 1 1 0 0 2 3 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 13 0 1639.7842 Q15437 Q15437 2 14 SEC23B Protein transport protein Sec23B yes yes 2 0.0013776 110.64 By MS/MS 5 0 1 1 114770 114770 0 1694 1503 1750 4282 3063 3063 1 4717.6 0 ATYLPQLTTEK LINTLIRKHGTEEQKATYLPQLTTEKVGSF EEQKATYLPQLTTEKVGSFCLSEAGAGSDS K A T E K V 1 0 0 0 0 1 1 0 0 0 2 1 0 0 1 0 3 0 1 0 0 0 11 0 1263.6711 P45954 P45954 160 170 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.016182 104.43 By MS/MS 7.5 0.5 1 1 2 6865500 6865500 0 1695 871 1751 4283;4284 3064 3064 1 141860 0 ATYQLTK FSRVQEVVQVLRALRATYQLTKARPRVLLQ VQVLRALRATYQLTKARPRVLLQSSEPGDQ R A T T K A 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 2 0 1 0 0 0 7 0 823.44397 Q5ST30 Q5ST30 918 924 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.026464 117.4 By MS/MS 4 0 1 1 1014500 1014500 0 1696 1619 1752 4285 3065 3065 1 27694 0 AVAAAYTFLQR QYLHYALFKANRLEKAVAAAYTFLQRNPKH RLEKAVAAAYTFLQRNPKHELTAKYLNYYQ K A V Q R N 4 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 11 0 1209.6506 Q92791 Q92791 161 171 LEPREL4 Synaptonemal complex protein SC65 yes yes 2 0.0018115 152.11 By MS/MS 6 0 1 1 0 0 0 1697 2080 1753 4286 3066 3066 1 0 0 AVAAGNSCR DFIRMTKGITMATAKAVAAGNSCRQEDVIA TMATAKAVAAGNSCRQEDVIATANLSRRAI K A V C R Q 3 1 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 9 0 904.4185 Q9Y490;Q9Y4G6 Q9Y490 2189 2197 TLN1;TLN2 Talin-1;Talin-2 yes no 2 0.0006944 148.99 By MS/MS 2 0 1 1 323020 323020 0 1698 2947 1754 4287 3067 3067 1 16056 0 AVAALLTIPEAEK QEFEKQDELKRSAMRAVAALLTIPEAEKSP MRAVAALLTIPEAEKSPLMSEFQSQISSNP R A V E K S 4 0 0 0 0 0 2 0 0 1 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1324.7602 Q86VP6 Q86VP6 1179 1191 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0031273 113.63 By MS/MS 4 0.816 1 1 1 3 1320100 1320100 0 1699 1829 1755 4288;4289;4290 3068;3069 3068 2 36268 0 AVAAPRPDR KCSACNVWRVCEGPKAVAAPRPDRLVNRLK VCEGPKAVAAPRPDRLVNRLKNITLDDASA K A V D R L 3 2 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 9 1 951.52501 O75534 O75534 744 752 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.044453 113.5 By MS/MS 4.5 0.5 1 1 2 2129400 2129400 0 1700 316 1756 4291;4292 3070 3070 1 81583 0 AVACSGAAQVR AMKLGAVKRILRAEKAVACSGAAQVRIKIL RAEKAVACSGAAQVRIKILASLVTQFNSGL K A V V R I 4 1 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 2 0 0 11 0 1088.5397 Q92797 Q92797 575 585 SYMPK Symplekin yes yes 2 0.0034577 109.44 By MS/MS 3 0 1 1 0 0 0 1701 2081 1757 4293 3071 3071 1 0 0 AVADAIR DKPAQIRFSNISAAKAVADAIRTSLGPKGM FSNISAAKAVADAIRTSLGPKGMDKMIQDG K A V I R T 3 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 7 0 714.40244 P50991 P50991 43 49 CCT4 T-complex protein 1 subunit delta yes yes 2 0.03532 111.28 By MS/MS 6 0 1 1 82934000 82934000 0 1702 956 1758 4294 3072 3072 1 646720 0 AVAENQPFLIEAMTYR DVFAVYNATKEARRRAVAENQPFLIEAMTY VAENQPFLIEAMTYRIGHHSTSDDSSAYRS R A V Y R I 3 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 16 0 1851.9189 P12694 P12694 317 332 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes yes 2 2.7758E-10 181.76 By MS/MS 7 0 2 2 1261300 1261300 0 1703 567 1759;1760 4295;4296 3073;3074 3073 356 2 22540 0 AVAEQIPLLVQGVR KASAGPQPLLVQSCKAVAEQIPLLVQGVRG KAVAEQIPLLVQGVRGSQAQPDSPSAQLAL K A V V R G 2 1 0 0 0 2 1 1 0 1 2 0 0 0 1 0 0 0 0 3 0 0 14 0 1491.8773 Q9Y490 Q9Y490 958 971 TLN1 Talin-1 yes yes 2;3 0.0001257 162.68 By MS/MS 2.8 0.748 2 2 1 5 1825700 1825700 0 1704 2947 1761 4297;4298;4299;4300;4301 3075;3076 3075 2 70711 0 AVAEQVLHSQSR LYRKLVAKDGSCLFRAVAEQVLHSQSRHVE LFRAVAEQVLHSQSRHVEVRMACIHYLREN R A V S R H 2 1 0 0 0 2 1 0 1 0 1 0 0 0 0 2 0 0 0 2 0 0 12 0 1323.6895 Q01804 Q01804 49 60 OTUD4 OTU domain-containing protein 4 yes yes 2 4.2728E-07 182.92 By MS/MS By MS/MS 3 0 2 1 1 652800 558390 94406 1705 1245 1762 4302;4303 3077;3078 3078 2 14577 135300 AVAGDASESALLK AVFQANQENLPILKRAVAGDASESALLKCI KRAVAGDASESALLKCIELCCGSVKEMRER R A V L K C 4 0 0 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 13 0 1230.6456 P05023 P05023 446 458 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 2.8671E-08 220.82 By MS/MS 3.57 1.59 1 1 1 2 1 1 7 30522000 30522000 0 1706 463 1763 4304;4305;4306;4307;4308;4309;4310 3079;3080;3081;3082;3083 3081 5 1034700 0 AVAGNISDPGLQK DELSKTISPMVMDAKAVAGNISDPGLQKSF AKAVAGNISDPGLQKSFLDSGYRILGAVAK K A V Q K S 2 0 1 1 0 1 0 2 0 1 1 1 0 0 1 1 0 0 0 1 0 0 13 0 1268.6725 P18206 P18206 803 815 VCL Vinculin yes yes 2 0.00033546 141.08 By MS/MS 4.5 0.5 1 1 2 2759300 2759300 0 1707 623 1764 4311;4312 3084 3084 1 81602 0 AVAGWEEVLR LLSHDSGSDHLAFVRAVAGWEEVLRWQDRS LAFVRAVAGWEEVLRWQDRSSRENYLEENL R A V L R W 2 1 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 1 0 2 0 0 10 0 1128.5928 Q7L2E3 Q7L2E3 942 951 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00059638 141.2 By MS/MS 3.5 0.5 1 1 2 8449600 8449600 0 1708 1763 1765 4313;4314 3085;3086 3085 2 222800 0 AVAHHTDCTFIR LLYGPPGTGKTLLARAVAHHTDCTFIRVSG LARAVAHHTDCTFIRVSGSELVQKFIGEGA R A V I R V 2 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 2 0 0 1 0 0 12 0 1426.6776 P62195 P62195 202 213 PSMC5 26S protease regulatory subunit 8 yes yes 2;3 0.00067008 152.64 By MS/MS 6.67 0.471 1 2 3 6948700 6948700 0 1709 1117 1766 4315;4316;4317 3087;3088 3087 2 120120 0 AVAISLPK TKEQLKIWMGKMQKKAVAISLPKGVVEVTH MGKMQKKAVAISLPKGVVEVTHDLQKHLAG K A V P K G 2 0 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 8 0 797.50109 P50454 P50454 301 308 SERPINH1 Serpin H1 yes yes 2 0.018685 108.46 By MS/MS 7.5 0.5 1 1 2 2592100 2592100 0 1710 947 1767 4318;4319 3089 3089 1 54599 0 AVANESGLNFISVK LLAGPPGCGKTLLAKAVANESGLNFISVKG KAVANESGLNFISVKGPELLNMYVGESERA K A V V K G 2 0 2 0 0 0 1 1 0 1 1 1 0 1 0 2 0 0 0 2 0 0 14 0 1447.7671 O15381 O15381 634 647 NVL Nuclear valosin-containing protein-like yes yes 2 1.9803E-05 160.18 By MS/MS 4 0 1 1 381680 381680 0 1711 174 1768 4320 3090 3090 1 10419 0 AVANQTSATFLR ILYGPPGTGKTLLAKAVANQTSATFLRVVG LAKAVANQTSATFLRVVGSELIQKYLGDGP K A V L R V 3 1 1 0 0 1 0 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 12 0 1277.6728 P62191 P62191 238 249 PSMC1 26S protease regulatory subunit 4 yes yes 2 3.3779E-07 208.84 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 55522000 55419000 103400 1712 1116 1769 4321;4322;4323;4324;4325 3091;3092 3092 2 570880 317130 AVANTMR LMGLEALKSHIMAAKAVANTMRTSLGPNGL KSHIMAAKAVANTMRTSLGPNGLDKMMVDK K A V M R T 2 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 7 0 761.38541 P48643 P48643 43 49 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.017299 133.81 By MS/MS 6 0 1 1 5742100 5742100 0 1713 909 1770 4326 3093 3093 1 44777 0 AVAQALEVIPR EKSKAMTGVEQWPYRAVAQALEVIPRTLIQ WPYRAVAQALEVIPRTLIQNCGASTIRLLT R A V P R T 3 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 11 0 1165.6819 P49368 P49368 439 449 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00023463 172.88 By MS/MS By MS/MS 5.54 2.53 1 1 1 1 2 3 1 1 1 1 12 1 460270000 460010000 254680 1714 916 1771 4327;4328;4329;4330;4331;4332;4333;4334;4335;4336;4337;4338;4339 3094;3095;3096;3097;3098;3099;3100;3101;3102;3103;3104 3099 11 16925000 781080 AVASCSEEAVQVLLK RVNAKDSKWLTPLHRAVASCSEEAVQVLLK AVASCSEEAVQVLLKHSADVNARDKNWQTP R A V L K H 3 0 0 0 1 1 2 0 0 0 2 1 0 0 0 2 0 0 0 3 0 0 15 0 1602.8287 O15084 O15084 81 95 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 5.0776E-10 187.58 By MS/MS 4 0 1 1 737760 737760 0 1715 147 1772 4340 3105 3105 1 20140 0 AVASDFYLR ______________________________ ______________________________ M A V L R Y 2 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 9 0 1040.5291 Q96A72 Q96A72 2 10 MAGOHB Protein mago nashi homolog 2 yes yes 2 0.00061942 133.55 By MS/MS 10 0 1 1 141370 141370 0 1716 2119 1773 4341 3106 3106 1 150260 0 AVASEIFK CRSISPEWKQQLQQKAVASEIFKGKKDNYP KQQLQQKAVASEIFKGKKDNYPQSVPRLFI K A V F K G 2 0 0 0 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 8 0 863.47527 O00159 O00159 875 882 MYO1C Unconventional myosin-Ic yes yes 2 0.018973 108.09 By MS/MS 3.5 0.5 1 1 2 2304700 2304700 0 1717 72 1774 4342;4343 3107 3107 1 62812 0 AVASQLDCNFLK LLYGPPGTGKTLLARAVASQLDCNFLKVVS LARAVASQLDCNFLKVVSSSIVDKYIGESA R A V L K V 2 0 1 1 1 1 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 12 0 1364.6758 P62333 P62333 186 197 PSMC6 26S protease regulatory subunit 10B yes yes 2 5.2288E-11 228.64 By MS/MS 7.5 0.5 1 1 2 24988000 24988000 0 1718 1133 1775 4344;4345 3108;3109 3108 2 510820 0 AVASSPAATNSEVK GEASKPPAPSEGSPKAVASSPAATNSEVKM KAVASSPAATNSEVKMTSFAERKKQLVKAE K A V V K M 4 0 1 0 0 0 1 0 0 0 0 1 0 0 1 3 1 0 0 2 0 0 14 0 1330.6729 Q9P1Y5 Q9P1Y5 550 563 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.0020578 116.54 By MS/MS By matching 3 0 2 1 1 413100 361900 51193 1719 2733 1776 4346;4347 3110 3110 1 9447.5 73370 AVATGKMDENQFVAVTSTNAAK GVNGIEERMTVVWDKAVATGKMDENQFVAV DENQFVAVTSTNAAKIFNLYPRKGRIAVGS K A V A K I 5 0 2 1 0 1 1 1 0 0 0 2 1 1 0 1 3 0 0 3 0 0 22 1 2252.1107 Q14194;Q14195 Q14194 369 390 CRMP1;DPYSL3 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 3 yes no 3 0.025465 52.814 By MS/MS By matching 4 2 1 1 1 1 1 1 1 5 2 6312900 6164000 148930 1720 1418 1777 4348;4349;4350;4351;4352;4353;4354 3111 3111 1093 1 112210 144760 AVATYHANTER EYHRSVTGKIQKLTKAVATYHANTEREQKK KLTKAVATYHANTEREQKKENERIEKERMR K A V E R E 3 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 1 1 0 0 11 0 1231.5945 P51532 P51532 503 513 SMARCA4 Transcription activator BRG1 yes yes 2 0.0020321 114.86 By MS/MS 2 0 1 1 0 0 0 1721 965 1778 4355 3112 3112 1 0 0 AVAVDLGNR TQLQVRALWSSAGSRAVAVDLGNRKLEISS SSAGSRAVAVDLGNRKLEISSGKLARFADG R A V N R K 2 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 913.49813 Q8TCS8 Q8TCS8 46 54 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.046101 82.452 By MS/MS 5 0 1 1 1671100 1671100 0 1722 1996 1779 4356 3113 3113 1 68689 0 AVAVGRPSNEELR ______________________________ ______________________________ M A V L R N 2 2 1 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 13 1 1396.7423 Q9NVA2 Q9NVA2 2 14 SEPT11 Septin-11 yes yes 2 0.0047876 122.69 By MS/MS By matching 6.75 0.829 2 1 1 3 1 21958000 21914000 44610 1723 2647 1780 4357;4358;4359;4360 3114;3115 3114 2 203800 136820 AVAVVVDPIQSVK VDINTQQSFEALSERAVAVVVDPIQSVKGK ERAVAVVVDPIQSVKGKVVIDAFRLINANM R A V V K G 2 0 0 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 5 0 0 13 0 1323.7762 O00487 O00487 140 152 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 2 9.6922E-05 155.26 By MS/MS By matching 8 0.707 1 2 1 3 1 21325000 21234000 90236 1724 100 1781 4361;4362;4363;4364 3116;3117;3118 3117 3 1686800 769830 AVCIAVIAK ______________________________ ______________________________ M A V A K E 3 0 0 0 1 0 0 0 0 2 0 1 0 0 0 0 0 0 0 2 0 0 9 0 943.55247 Q9UL33 Q9UL33 2 10 TRAPPC2L Trafficking protein particle complex subunit 2-like protein yes yes 2 0.0032566 122.78 By MS/MS 10 0 1 1 69171 69171 0 1725 2820 1782 4365 3119 3119 1 73521 0 AVCMLSNTTAIAEAWAR PPTVVPGGDLAKVQRAVCMLSNTTAIAEAW CMLSNTTAIAEAWARLDHKFDLMYAKRAFV R A V A R L 5 1 1 0 1 0 1 0 0 1 1 0 1 0 0 1 2 1 0 1 0 0 17 0 1863.8971 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;P68366 P68363 374 390 TUBA1B;TUBA1A;TUBA3E;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain no no 2;3 1.6245E-55 346.65 By MS/MS 7.25 1.48 4 1 1 1 1 8 118040000 118040000 0 1726 1185;1754;1186 1783;1784 4366;4367;4368;4369;4370;4371;4372;4373 3120;3121;3122;3123;3124;3125;3126;3127 3120 926 8 1234900 0 AVCMLSNTTAVAEAWAR PPTVVPGGDLAKVQRAVCMLSNTTAVAEAW CMLSNTTAVAEAWARLDHKFDLMYAKRAFV R A V A R L 5 1 1 0 1 0 1 0 0 0 1 0 1 0 0 1 2 1 0 2 0 0 17 0 1849.8815 Q9BQE3 Q9BQE3 374 390 TUBA1C Tubulin alpha-1C chain yes yes 2;3 3.7079E-115 346.65 By MS/MS 6 0 3 3 30614000 30614000 0 1727 2314 1785;1786 4374;4375;4376 3128;3129;3130 3129 1459 2 238730 0 AVDDGVNTFK VLRGSTDNLMDDIERAVDDGVNTFKVLTRD DDIERAVDDGVNTFKVLTRDKRLVPGGGAT R A V F K V 1 0 1 2 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1064.5138 P50990 P50990 391 400 CCT8 T-complex protein 1 subunit theta yes yes 2 9.381E-05 166.34 By MS/MS By matching 5.73 2.7 1 1 1 1 3 1 1 1 1 10 1 143280000 143090000 183030 1728 955 1787 4377;4378;4379;4380;4381;4382;4383;4384;4385;4386;4387 3131;3132;3133;3134;3135;3136;3137;3138 3135 8 2659600 561330 AVDGIEVYSTK RNPSLLLGKRSLPGRAVDGIEVYSTKVNCK LPGRAVDGIEVYSTKVNCKVTSRFAHNVVT R A V T K V 1 0 0 1 0 0 1 1 0 1 0 1 0 0 0 1 1 0 1 2 0 0 11 0 1180.5976 CON__Q0V8M9 CON__Q0V8M9 39 49 yes yes 2 0.0035243 113.93 By MS/MS 8.5 0.5 1 1 2 870270 870270 0 + 1729 55 1788 4388;4389 3139 3139 1 231120 0 AVDLIQK GSDYCESIRGIGPKRAVDLIQKHKSIEEIV IRGIGPKRAVDLIQKHKSIEEIVRRLDPNK R A V Q K H 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 785.4647 P39748;CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 P39748 246 252 FEN1 Flap endonuclease 1 yes no 2 0.049192 101.69 By MS/MS 7 0.816 1 1 1 3 2920700 2920700 0 1730 826 1789 4390;4391;4392 3140 3140 1 60630 0 AVDPTSGQLYGLAR LGRVKGRTGLRVVVKAVDPTSGQLYGLARE KAVDPTSGQLYGLARELSDEIQVQVFEKLQ K A V A R E 2 1 0 1 0 1 0 2 0 0 2 0 0 0 1 1 1 0 1 1 0 0 14 0 1446.7467 Q8TEM1 Q8TEM1 1259 1272 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 1.5932E-05 163.45 By MS/MS 2 0.816 1 1 1 3 1049700 1049700 0 1731 2002 1790 4393;4394;4395 3141;3142 3142 2 49026 0 AVDQVCTFLFK ______________________________ SPGKAVDQVCTFLFKKPGRKGAAGRRKRPA K A V F K K 1 0 0 1 1 1 0 0 0 0 1 1 0 2 0 0 1 0 0 2 0 0 11 0 1326.6642 O15541 O15541 10 20 RNF113A RING finger protein 113A yes yes 2 0.00056569 140.07 By MS/MS 7 0 1 1 223660 223660 0 1732 180 1791 4396 3143 3143 1 3996.9 0 AVDSLLNFETVK FRRAMNTQENATRARAVDSLLNFETVKYYN RARAVDSLLNFETVKYYNAESYEVERYREA R A V V K Y 1 0 1 1 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 2 0 0 12 0 1334.7082 Q9NP58 Q9NP58 453 464 ABCB6 ATP-binding cassette sub-family B member 6, mitochondrial yes yes 2 0.0048071 107.11 By MS/MS 1 0 1 1 64086 64086 0 1733 2572 1792 4397 3144 3144 1 3131.1 0 AVDSLVPIGR IPRISVREPMQTGIKAVDSLVPIGRGQREL QTGIKAVDSLVPIGRGQRELIIGDRQTGKT K A V G R G 1 1 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 2 0 0 10 0 1025.5869 P25705 P25705 195 204 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 8.5939E-05 167.23 By MS/MS By MS/MS 6 2.76 1 1 1 3 1 2 1 1 10 1 96299000 95461000 838380 1734 687 1793 4398;4399;4400;4401;4402;4403;4404;4405;4406;4407;4408 3145;3146;3147;3148;3149;3150;3151 3148 7 1308700 2571200 AVDSQILPK KEKYEITEQRKIDQKAVDSQILPKIKAIPQ RKIDQKAVDSQILPKIKAIPQLQGYLRSVF K A V P K I 1 0 0 1 0 1 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 9 0 969.5495 Q02878 Q02878 252 260 RPL6 60S ribosomal protein L6 yes yes 2 0.027954 96.034 By MS/MS 8 0 1 1 521650 521650 0 1735 1257 1794 4409 3152 3152 1 34413 0 AVDTLAYLSDGDAR SSNSSSEPAMFIEDKAVDTLAYLSDGDARA KAVDTLAYLSDGDARAGLNGLQLAVLARLS K A V A R A 3 1 0 3 0 0 0 1 0 0 2 0 0 0 0 1 1 0 1 1 0 0 14 0 1465.7049 Q96S55 Q96S55 428 441 WRNIP1 ATPase WRNIP1 yes yes 2 7.3179E-09 147.62 By MS/MS 5 0 1 1 2309700 2309700 0 1736 2253 1795 4410 3153 3153 0 94937 0 AVEAVVNDTSGENK AAAKEICQAIGKQMKAVEAVVNDTSGENKS KAVEAVVNDTSGENKSGAADIAASQHVMVC K A V N K S 2 0 2 1 0 0 2 1 0 0 0 1 0 0 0 1 1 0 0 3 0 0 14 0 1431.6842 Q9P2D3 Q9P2D3 391 404 HEATR5B HEAT repeat-containing protein 5B yes yes 2 4.9702E-36 269.44 By MS/MS 2 0 1 1 510780 510780 0 1737 2736 1796 4411 3154 3154 1 25388 0 AVEDEATK KVMVTNVTSLLKTVKAVEDEATKGTRALEA SLLKTVKAVEDEATKGTRALEATTEHIRQE K A V T K G 2 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 8 0 861.40798 Q9Y490 Q9Y490 2134 2141 TLN1 Talin-1 yes yes 2 0.02399 101.6 By MS/MS 2 0 1 1 515330 515330 0 1738 2947 1797 4412 3155 3155 1 25615 0 AVEDEATKGTR KVMVTNVTSLLKTVKAVEDEATKGTRALEA KTVKAVEDEATKGTRALEATTEHIRQELAV K A V T R A 2 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 1 0 0 11 1 1175.5782 Q9Y490 Q9Y490 2134 2144 TLN1 Talin-1 yes yes 2 7.4068E-10 195.51 By MS/MS 2 0 1 1 0 0 0 1739 2947 1798 4413 3156 3156 1 0 0 AVEDFLR CSVNATPQQMPQTEKAVEDFLRSIGRSKKE QQMPQTEKAVEDFLRSIGRSKKERRPVRPH K A V L R S 1 1 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 848.43922 Q5JRX3 Q5JRX3 795 801 PITRM1 Presequence protease, mitochondrial yes yes 2 0.027704 116.54 By MS/MS 4 0 1 1 646250 646250 0 1740 1606 1799 4414 3157 3157 1 17642 0 AVEDIHGLFSLSK LDSAISMELWQEAFKAVEDIHGLFSLSKKP FKAVEDIHGLFSLSKKPPKPQLMANYYNKV K A V S K K 1 0 0 1 0 0 1 1 1 1 2 1 0 1 0 2 0 0 0 1 0 0 13 0 1414.7456 Q14152 Q14152 252 264 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.1253E-07 185.99 By MS/MS 4 0.816 1 1 1 3 2755100 2755100 0 1741 1409 1800 4415;4416;4417 3158 3158 1 73738 0 AVEDKNIGPLVK MMFGNDRSRFLEGKRAVEDKNIGPLVKTIM GKRAVEDKNIGPLVKTIMTRCIQCTRCIRF R A V V K T 1 0 1 1 0 0 1 1 0 1 1 2 0 0 1 0 0 0 0 2 0 0 12 1 1281.7293 P28331 P28331 159 170 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.029327 111.27 By MS/MS 5 0 1 1 700000 700000 0 1742 718 1801 4418 3159 3159 1 28773 0 AVEELQSIIK ______________________________ ______________________________ M A V I K R 1 0 0 0 0 1 2 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1128.639 Q92990 Q92990 2 11 GLMN Glomulin yes yes 2 0.00026004 137.05 By MS/MS 6 0 1 1 241360 241360 0 1743 2095 1802 4419 3160 3160 1 1882.1 0 AVEELQSIIKR ______________________________ ______________________________ M A V K R C 1 1 0 0 0 1 2 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 11 1 1284.7402 Q92990 Q92990 2 12 GLMN Glomulin yes yes 2 4.006E-10 198.61 By MS/MS 6 0.816 1 1 1 3 6439600 6439600 0 1744 2095 1803 4420;4421;4422 3161;3162 3162 2 56007 0 AVEENGEEAEPVR GFHPERDPSDLKKVKAVEENGEEAEPVRNG VKAVEENGEEAEPVRNGAESVSEGEGIDAN K A V V R N 2 1 1 0 0 0 5 1 0 0 0 0 0 0 1 0 0 0 0 2 0 0 13 0 1427.6529 O43432 O43432 566 578 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 5.0434E-05 158.3 By MS/MS 2 0 1 1 332530 332530 0 1745 200 1804 4423 3163 3163 1 16529 0 AVEEQIEYLQK ENKKMADEDALRKIRAVEEQIEYLQKKLAM RKIRAVEEQIEYLQKKLAMAKQEEEALLSE R A V Q K K 1 0 0 0 0 2 3 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1348.6874 Q5VTR2 Q5VTR2 706 716 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.0060176 113.44 By MS/MS 4 0 1 1 968480 968480 0 1746 1649 1805 4424 3164 3164 1 26439 0 AVEFLASNESR IPPQSRRRMKRVWDRAVEFLASNESRIQTE VWDRAVEFLASNESRIQTESHRVAGEDMLV R A V S R I 2 1 1 0 0 0 2 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 Q8NC56 Q8NC56 464 474 LEMD2 LEM domain-containing protein 2 yes yes 2 0.005693 104.82 By MS/MS By matching 6.75 0.829 2 1 1 3 1 8011500 7987000 24552 1747 1950 1806 4425;4426;4427;4428 3165 3165 1 142460 75299 AVEGCVSASQAATEDGQLLR VCQEQLVEAGRLVAKAVEGCVSASQAATED VSASQAATEDGQLLRGVGAAATAVTQALNE K A V L R G 4 1 0 1 1 2 2 2 0 0 2 0 0 0 0 2 1 0 0 2 0 0 20 0 2060.9797 Q9Y490 Q9Y490 746 765 TLN1 Talin-1 yes yes 2;3 4.1347E-78 347.55 By MS/MS 2.33 0.471 2 1 3 1863500 1863500 0 1748 2947 1807 4429;4430;4431 3166;3167 3166 2 84932 0 AVEGLLDATSGADADLLLR RNSRDAIAALGLLQKAVEGLLDATSGADAD LLDATSGADADLLLRYRECHLLVLKALQDG K A V L R Y 4 1 0 3 0 0 1 2 0 0 5 0 0 0 0 1 1 0 0 1 0 0 19 0 1898.9949 A5YKK6 A5YKK6 1665 1683 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 3.3348E-11 162.37 By MS/MS 2 0 1 1 181310 181310 0 1749 19 1808 4432 3168;3169;3170 3168 3 9012.3 0 AVEHINK RDNDKTRYMGKGVSKAVEHINKTIAPALVS YMGKGVSKAVEHINKTIAPALVSKKLNVTE K A V N K T 1 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 809.43955 P06733 P06733 65 71 ENO1 Alpha-enolase yes yes 2 0.012549 146.94 By MS/MS By matching 6 0 2 1 1 8030400 8007200 23272 1750 482 1809 4433;4434 3171 3171 1 62440 71374 AVELLGDIVQNCSLEDSQIEKER HTAYYIKALSKDLPKAVELLGDIVQNCSLE VQNCSLEDSQIEKERDVILREMQENDASMR K A V E R D 1 1 1 2 1 2 4 1 0 2 3 1 0 0 0 2 0 0 0 2 0 0 23 1 2644.3014 P31930 P31930 143 165 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 3 0.0027381 69.122 By MS/MS 6 0 1 1 2568600 2568600 0 1751 756 1810 4435 3172 3172 1 20030 0 AVELLPDGTANLAK LSTAEREQALRLKSRAVELLPDGTANLAKL RAVELLPDGTANLAKLQLVVENSAQRVIHL R A V A K L 3 0 1 1 0 0 1 1 0 0 3 1 0 0 1 0 1 0 0 1 0 0 14 0 1410.7718 O60826 O60826 389 402 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.00095102 124.39 By MS/MS 5 0 1 1 2000100 2000100 0 1752 268 1811 4436 3173 3173 1 82211 0 AVENSSTAIGIR FSPDGRVFQVEYAMKAVENSSTAIGIRCKD AMKAVENSSTAIGIRCKDGVVFGVEKLVLS K A V I R C 2 1 1 0 0 0 1 1 0 2 0 0 0 0 0 2 1 0 0 1 0 0 12 0 1216.6412 P25788 P25788 30 41 PSMA3 Proteasome subunit alpha type-3 yes yes 2 4.4924E-05 167.11 By MS/MS By matching 8.75 0.829 2 1 1 3 1 10731000 10686000 45267 1753 690 1812 4437;4438;4439;4440 3174 3174 1 1058900 386180 AVENYLIQMAR ARLSNLALVKPEKTKAVENYLIQMARYGQL EKTKAVENYLIQMARYGQLSEKVSEQGLIE K A V A R Y 2 1 1 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 1 0 0 11 0 1306.6704 O14737 O14737 69 79 PDCD5 Programmed cell death protein 5 yes yes 2 4.6097E-07 183.72 By MS/MS 10 0 1 1 1881800 1881800 0 1754 124 1813 4441 3175 3175 81 1 2000200 0 AVETPPLSSVNLLEGLSR KSCVAAFLDVVIGGRAVETPPLSSVNLLEG TPPLSSVNLLEGLSRTVVYITYSQLITLVN R A V S R T 1 1 1 0 0 0 2 1 0 0 4 0 0 0 2 3 1 0 0 2 0 0 18 0 1881.0207 Q14C86 Q14C86 387 404 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.002007 111.66 By MS/MS 3 0.816 1 1 1 3 340180 340180 0 1755 1455 1814 4442;4443;4444 3176;3177;3178;3179 3177 4 12777 0 AVEYGLIQPNQDGE DHSPVTRAAAACLDKAVEYGLIQPNQDGE_ KAVEYGLIQPNQDGE_______________ K A V G E - 1 0 1 1 0 2 2 2 0 1 1 0 0 0 1 0 0 0 1 1 0 0 14 0 1531.7155 Q9H3U1 Q9H3U1 931 944 UNC45A Protein unc-45 homolog A yes yes 2 0.01599 85.288 By MS/MS 4 0 1 1 458400 458400 0 1756 2493 1815 4445 3180 3180 1 12514 0 AVFADLDLR ______________________________ ______________________________ M A V L R A 2 1 0 2 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1018.5447 P78346 P78346 2 10 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.00078857 128.69 By MS/MS 8.5 0.5 1 1 2 700170 700170 0 1757 1193 1816 4446;4447 3181 3181 1 64813 0 AVFDETYPDPVR QDCPLAAAKAIQGLRAVFDETYPDPVRVVS GLRAVFDETYPDPVRVVSIGVPVSELLDDP R A V V R V 1 1 0 2 0 0 1 0 0 0 0 0 0 1 2 0 1 0 1 2 0 0 12 0 1407.667 P49588 P49588 684 695 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 4.5294E-07 182.16 By MS/MS 4.5 0.5 1 1 2 3969000 3969000 0 1758 921 1817 4448;4449 3182;3183 3182 2 119290 0 AVFLVPK LSPTNDLMVIAREQKAVFLVPKWKYSDKGK MVIAREQKAVFLVPKWKYSDKGKEEMQFAV K A V P K W 1 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 7 0 772.48471 Q9H2M9 Q9H2M9 97 103 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.030416 114.67 By MS/MS 3 0 1 1 681990 681990 0 1759 2481 1818 4450 3184 3184 1 17803 0 AVFPSIVGR SGMCKAGFAGDDAPRAVFPSIVGRPRHQGV GDDAPRAVFPSIVGRPRHQGVMVGMGQKDS R A V G R P 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 9 0 944.54435 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P63261 P60709 29 37 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0012486 137.9 By MS/MS By matching 7.33 0.471 2 1 2 1 16052000 15947000 104650 1760 1072;1179 1819 4451;4452;4453 3185 3185 1 296260 429600 AVFQANQENLPILK ATWLALSRIAGLCNRAVFQANQENLPILKR RAVFQANQENLPILKRAVAGDASESALLKC R A V L K R 2 0 2 0 0 2 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 14 0 1583.8671 P05023 P05023 431 444 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 6.398E-08 216.06 By MS/MS By matching 3.57 1.59 1 1 1 2 1 1 6 1 28491000 28465000 25468 1761 463 1820 4454;4455;4456;4457;4458;4459;4460 3186;3187;3188;3189;3190;3191 3190 6 874220 53218 AVFVDLEPTVIDEIR TTFFCETGAGKHVPRAVFVDLEPTVIDEIR AVFVDLEPTVIDEIRNGPYRQLFHPEQLIT R A V I R N 1 1 0 2 0 0 2 0 0 2 1 0 0 1 1 0 1 0 0 3 0 0 15 0 1714.9142 P68366 P68366 65 79 TUBA4A Tubulin alpha-4A chain yes yes 2 0.008208 97.121 By MS/MS 6 0 1 1 1074600 1074600 0 1762 1186 1821 4461 3192 3192 1 8379.9 0 AVFVDLEPTVIDEVR NTFFSETGAGKHVPRAVFVDLEPTVIDEVR AVFVDLEPTVIDEVRTGTYRQLFHPEQLIT R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 P68363;Q71U36;Q9BQE3 P68363 65 79 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2;3 2.1441E-29 250.48 By MS/MS By MS/MS 6.06 2.4 3 2 4 2 4 14 6 5 6 3 45 4 1892400000 1891300000 1182200 1763 1185;1754;2314 1822 4462;4463;4464;4465;4466;4467;4468;4469;4470;4471;4472;4473;4474;4475;4476;4477;4478;4479;4480;4481;4482;4483;4484;4485;4486;4487;4488;4489;4490;4491;4492;4493;4494;4495;4496;4497;4498;4499;4500;4501;4502;4503;4504;4505;4506;4507;4508;4509;4510 3193;3194;3195;3196;3197;3198;3199;3200;3201;3202;3203;3204;3205;3206;3207;3208;3209;3210;3211;3212;3213;3214;3215;3216;3217;3218;3219;3220;3221;3222;3223;3224;3225;3226;3227;3228;3229;3230;3231;3232;3233;3234;3235;3236;3237;3238;3239;3240;3241;3242;3243;3244;3245;3246;3247;3248;3249;3250;3251;3252;3253;3254;3255;3256;3257;3258;3259;3260;3261;3262;3263;3264;3265;3266;3267;3268;3269 3213 77 41634000 7908900 AVFVDLEPTVIDEVRTGTYR NTFFSETGAGKHVPRAVFVDLEPTVIDEVR LEPTVIDEVRTGTYRQLFHPEQLITGKEDA R A V Y R Q 1 2 0 2 0 0 2 1 0 1 1 0 0 1 1 0 3 0 1 4 0 0 20 1 2279.1798 P68363;Q71U36;Q9BQE3 P68363 65 84 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 0.0082575 100.73 By MS/MS 6 0 1 1 32571000 32571000 0 1764 1185;1754;2314 1823 4511 3270 3270 1 253990 0 AVGDASKR VSCLPGQRDVDNALRAVGDASKRLLSDSLP DVDNALRAVGDASKRLLSDSLPPSTGTFQE R A V K R L 2 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 8 1 802.42972 Q9Y490 Q9Y490 1215 1222 TLN1 Talin-1 yes yes 2 0.019276 137.18 By MS/MS 2.5 0.5 1 1 2 395450 395450 0 1765 2947 1824 4512;4513 3271 3271 1 18513 0 AVGDGILCNTYIDSYKGTVDCVQAR DTPRAPQLVGQFIARAVGDGILCNTYIDSY YIDSYKGTVDCVQARAALDKATVLLSMSKG R A V A R A 2 1 1 3 2 1 0 3 0 2 1 1 0 0 0 1 2 0 2 3 0 0 25 1 2774.3004 Q53EL6 Q53EL6 268 292 PDCD4 Programmed cell death protein 4 yes yes 3 0.0034181 61.524 By MS/MS 6 0 1 1 3079100 3079100 0 1766 1581 1825 4514 3272 3272 1 24011 0 AVGHPFVIQLGR KQLGSILKTNVRACKAVGHPFVIQLGRIYL ACKAVGHPFVIQLGRIYLDMLNVYKCLSEN K A V G R I 1 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 2 0 0 12 0 1292.7353 O14980 O14980 701 712 XPO1 Exportin-1 yes yes 3 0.029457 82.029 By MS/MS 4 0 1 1 281250 281250 0 1767 142 1826 4515 3273 3273 0 7677.8 0 AVGPSSTQLYMVR EKDPKSGFDIKVPRRAVGPSSTQLYMVRTM RRAVGPSSTQLYMVRTMLESLIADKSGSKK R A V V R T 1 1 0 0 0 1 0 1 0 0 1 0 1 0 1 2 1 0 1 2 0 0 13 0 1407.718 Q7L576 Q7L576 551 563 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 9.4935E-05 123.67 By MS/MS 3 0 1 1 0 0 0 1768 1765 1827 4516 3274 3274 1252 1 0 0 AVGQDTLLR TMRPDTLQDYFGQSKAVGQDTLLRSLLETN YFGQSKAVGQDTLLRSLLETNEIPSLILWG K A V L R S 1 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 971.53999 Q96S55 Q96S55 245 253 WRNIP1 ATPase WRNIP1 yes yes 2 0.020116 96.668 By MS/MS 6.5 1.12 1 1 1 1 4 7631800 7631800 0 1769 2253 1828 4517;4518;4519;4520 3275 3275 1 233160 0 AVGSISSTAFDIR GTDPRSREVIRNACKAVGSISSTAFDIRFN CKAVGSISSTAFDIRFNPDIFSPGVRFPES K A V I R F 2 1 0 1 0 0 0 1 0 2 0 0 0 1 0 3 1 0 0 1 0 0 13 0 1322.683 O75153 O75153 704 716 CLUH Clustered mitochondria protein homolog yes yes 2 0.011837 92.866 By MS/MS 3 0 1 1 1613200 1613200 0 1770 285 1829 4521 3276 3276 1 42113 0 AVGTPGGGGGGAVPGISAMSR RGDKEAPPPVLLTPKAVGTPGGGGGGAVPG GGGGGAVPGISAMSRGDLSQRAKDLSKRSF K A V S R G 3 1 0 0 0 0 0 8 0 1 0 0 1 0 2 2 1 0 0 2 0 0 21 0 1754.8734 P48634 P48634 1350 1370 PRRC2A Protein PRRC2A yes yes 2 3.2681E-08 140.03 By MS/MS 1.5 0.5 1 1 2 510680 510680 0 1771 907 1830 4522;4523 3277 3277 638 1 25357 0 AVGVQNYLEEAAER GTDFNGVAAVRGTQRAVGVQNYLEEAAERL RAVGVQNYLEEAAERLNSVEPVRFTISSRT R A V E R L 3 1 1 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 1 2 0 0 14 0 1547.758 Q8N0Z8 Q8N0Z8 37 50 PUSL1 tRNA pseudouridine synthase-like 1 yes yes 2 3.7114E-08 188.29 By MS/MS 8 0 1 1 709950 709950 0 1772 1890 1831 4524 3278 3278 1 46835 0 AVHEDIVAVELLPK ENKEIILQGLKHLNRAVHEDIVAVELLPKS RAVHEDIVAVELLPKSQWVAPSSVVLHDEG R A V P K S 2 0 0 1 0 0 2 0 1 1 2 1 0 0 1 0 0 0 0 3 0 0 14 0 1531.861 Q9Y2L1 Q9Y2L1 286 299 DIS3 Exosome complex exonuclease RRP44 yes yes 2;3 8.3652E-05 159.94 By MS/MS 3.67 0.471 1 2 3 3502200 3502200 0 1773 2892 1832 4525;4526;4527 3279;3280 3280 2 95463 0 AVIEHNLLSASK HQKATTADGSSILDRAVIEHNLLSASKLYN LDRAVIEHNLLSASKLYNNITFEELGALLE R A V S K L 2 0 1 0 0 0 1 0 1 1 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1280.7089 Q9BT78 Q9BT78 303 314 COPS4 COP9 signalosome complex subunit 4 yes yes 2 0.00035822 145.23 By MS/MS 7.5 0.5 1 1 2 6147800 6147800 0 1774 2347 1833 4528;4529 3281 3281 1 122080 0 AVIELLEK VRGDAHECFVSPVAKAVIELLEKSGVNLDG FVSPVAKAVIELLEKSGVNLDGKKILVVGA K A V E K S 1 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 913.54843 Q6UB35 Q6UB35 206 213 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0074075 141.52 By MS/MS By matching 5.67 1.49 2 1 1 1 1 5 1 14374000 14290000 84421 1775 1726 1834 4530;4531;4532;4533;4534;4535 3282;3283;3284 3284 3 417310 176400 AVIETADR IKKYAEVLRYVDSSKAVIETADRAKLQPIA RYVDSSKAVIETADRAKLQPIALSCVLNIG K A V D R A 2 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 8 0 873.4556 Q08752 Q08752 258 265 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.019809 107.01 By MS/MS 7.5 0.5 1 1 2 2634300 2634300 0 1776 1290 1835 4536;4537 3285 3285 1 64459 0 AVIFEDCAVPVANR GKKEKKVGWNSQPTRAVIFEDCAVPVANRI RAVIFEDCAVPVANRIGSEGQGFLIAVRGL R A V N R I 3 1 1 1 1 0 1 0 0 1 0 0 0 1 1 0 0 0 0 3 0 0 14 0 1559.7766 Q9UKU7 Q9UKU7 245 258 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 3.7172E-08 188.28 By MS/MS 7.5 0.5 1 1 2 3812600 3812600 0 1777 2816 1836 4538;4539 3286;3287 3287 2 148130 0 AVIGIGIEEEDRK CDRAGSVATCQAVMRAVIGIGIEEEDRKHT MRAVIGIGIEEEDRKHTWMEDADSCVAHNA R A V R K H 1 1 0 1 0 0 3 2 0 3 0 1 0 0 0 0 0 0 0 1 0 0 13 1 1427.762 O94906 O94906 528 540 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0042983 130.01 By MS/MS 4.5 0.5 1 1 2 2077900 2077900 0 1778 358 1837 4540;4541 3288 3288 1 60267 0 AVILIGGPQK ______________________________ ______________________________ K A V Q K G 1 0 0 0 0 1 0 2 0 2 1 1 0 0 1 0 0 0 0 1 0 0 10 0 994.61752 Q96IJ6 Q96IJ6 4 13 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 2 0.0083727 100.45 By MS/MS 7 0 1 1 740530 740530 0 1779 2202 1838 4542 3289 3289 1 13233 0 AVIPEAVVEVLDPK FWDDVYGFKMSCMKKAVIPEAVVEVLDPKT KAVIPEAVVEVLDPKTLISEPCGIKHIDCH K A V P K T 2 0 0 1 0 0 2 0 0 1 1 1 0 0 2 0 0 0 0 4 0 0 14 0 1477.8392 O60678 O60678 397 410 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.001721 117.98 By MS/MS 5.5 1.12 1 1 1 1 4 2818600 2818600 0 1780 257 1839 4543;4544;4545;4546 3290;3291 3291 2 48213 0 AVIQVSQIVAR VTKEAFDRSFEVNLRAVIQVSQIVARGLIA VNLRAVIQVSQIVARGLIARGVPGAIVNVS R A V A R G 2 1 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 0 3 0 0 11 0 1182.7085 Q7Z4W1 Q7Z4W1 110 120 DCXR L-xylulose reductase yes yes 2 0.0013961 128.35 By MS/MS 9 0 1 1 648590 648590 0 1781 1798 1840 4547 3292 3292 1 372230 0 AVIYNPATQADWTAK RTGLEDPERYLFVDRAVIYNPATQADWTAK AVIYNPATQADWTAKKLVWIPSERHGFEAA R A V A K K 4 0 1 1 0 1 0 0 0 1 0 1 0 0 1 0 2 1 1 1 0 0 15 0 1647.8257 P35580 P35580 19 33 MYH10 Myosin-10 yes yes 2 0.0084132 96.745 By MS/MS 2 0 1 1 181480 181480 0 1782 794 1841 4548 3293 3293 1 9020.3 0 AVLAQLGCPIK LFPMFMGGLLSAHNRAVLAQLGCPIKNLDA AHNRAVLAQLGCPIKNLDALENAQAIKKKL R A V I K N 2 0 0 0 1 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1168.6638 Q86UT6 Q86UT6 637 647 NLRX1 NLR family member X1 yes yes 2 0.0004935 143.01 By MS/MS 4 0 1 1 1620800 1620800 0 1783 1825 1842 4549 3294;3295 3295 2 44246 0 AVLASTPR DPHGIQREDLILSLRAVLASTPRFAEFLLP DLILSLRAVLASTPRFAEFLLPLLIEKVDS R A V P R F 2 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 8 0 813.47085 Q96T76 Q96T76 247 254 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.023957 101.64 By MS/MS 4.5 0.5 1 1 2 1455400 1455400 0 1784 2261 1843 4550;4551 3296 3296 1 41551 0 AVLDALLEGK YVVSGNDPAAEEPSRAVLDALLEGKAQWGS EEPSRAVLDALLEGKAQWGSNMQVTLIPTH R A V G K A 2 0 0 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1027.5914 P46821;P78559 P46821 2400 2409 MAP1B;MAP1A Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1;Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.00080263 132.01 By MS/MS 8 0 1 1 544180 544180 0 1785 890 1844 4552 3297 3297 1 35900 0 AVLDSYEYFAVLAAK ILYKRLSVLVKGHDKAVLDSYEYFAVLAAK AVLDSYEYFAVLAAKELGISIKVHEPPRKI K A V A K E 4 0 0 1 0 0 1 0 0 0 2 1 0 1 0 1 0 0 2 2 0 0 15 0 1658.8556 P82664 P82664 86 100 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 2 0.027339 95.618 By MS/MS 9.5 0.5 1 1 2 107580 107580 0 1786 1203 1845 4553;4554 3298 3298 1 84445 0 AVLEEGTDVVIK DGVFTDVAGPELQNKAVLEEGTDVVIKMLQ QNKAVLEEGTDVVIKMLQTAKNLLKEEKLV K A V I K M 1 0 0 1 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 3 0 0 12 0 1271.6973 Q9NSE4 Q9NSE4 434 445 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 1.8184E-16 218.94 By MS/MS By MS/MS 4.33 0.471 2 1 2 1 23074000 23013000 61343 1787 2624 1846 4555;4556;4557 3299;3300;3301 3301 3 650580 128180 AVLELFDR CCHATMFFSICFSFRAVLELFDRYDGLRRL SICFSFRAVLELFDRYDGLRRLVNLISTLE R A V D R Y 1 1 0 1 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 961.52328 Q9Y4B6 Q9Y4B6 472 479 VPRBP Protein VPRBP yes yes 2 0.014183 114.28 By MS/MS 3 0 1 1 167340 167340 0 1788 2950 1847 4558 3302 3302 1 4368.4 0 AVLENNLGAAVLR APLNLYGKTKLDGEKAVLENNLGAAVLRIP EKAVLENNLGAAVLRIPILYGEVEKLEESA K A V L R I 3 1 2 0 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 2 0 0 13 0 1338.7619 Q9NZL9 Q9NZL9 169 181 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 2 7.6521E-12 186.87 By MS/MS 7 0 1 1 0 0 0 1789 2714 1848 4559 3303 3303 1 0 0 AVLEQEETAAASR LTEGAKEEGGEEVAKAVLEQEETAAASRER AKAVLEQEETAAASRERQEEQSAAIHISET K A V S R E 4 1 0 0 0 1 3 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 13 0 1373.6787 Q9Y2J2 Q9Y2J2 912 924 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes yes 2 3.9776E-05 162.22 By MS/MS 3.5 0.5 1 1 2 994140 994140 0 1790 2889 1849 4560;4561 3304 3304 1 26818 0 AVLEQFGFPLTGTEAR EGALTGKQPDGSAEKAVLEQFGFPLTGTEA VLEQFGFPLTGTEARCYTNHALSYDQAKRV K A V A R C 2 1 0 0 0 1 2 2 0 0 2 0 0 2 1 0 2 0 0 1 0 0 16 0 1734.8941 Q9Y2C4 Q9Y2C4 60 75 EXOG Nuclease EXOG, mitochondrial yes yes 2 0.00038947 125.97 By MS/MS 7 0 1 1 218170 218170 0 1791 2883 1850 4562 3305 3305 1 3898.7 0 AVLFCLSEDK VRKSSTPEEVKKRKKAVLFCLSEDKKNIIL KKRKKAVLFCLSEDKKNIILEEGKEILVGD K A V D K K 1 0 0 1 1 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1180.5798 P23528 P23528 35 44 CFL1 Cofilin-1 yes yes 2 0.0072207 101.25 By MS/MS 9.5 0.5 1 1 2 658110 658110 0 1792 671 1851 4563;4564 3306 3306 1 599660 0 AVLFCLSEDKK VRKSSTPEEVKKRKKAVLFCLSEDKKNIIL KRKKAVLFCLSEDKKNIILEEGKEILVGDV K A V K K N 1 0 0 1 1 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 11 1 1308.6748 P23528 P23528 35 45 CFL1 Cofilin-1 yes yes 2 0.0045161 140.45 By MS/MS 9.5 0.5 1 1 2 1086000 1086000 0 1793 671 1852 4565;4566 3307 3307 1 891230 0 AVLGANDPEK KPIDYYTETKILQERAVLGANDPEKNFLTT ILQERAVLGANDPEKNFLTTAIRPHGIFGP R A V E K N 2 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1012.5189 Q15738 Q15738 182 191 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.0064779 102.62 By MS/MS By matching 7.8 0.748 2 2 1 3 2 25017000 24941000 75891 1794 1515 1853 4567;4568;4569;4570;4571 3308;3309 3309 2 629920 541530 AVLGEVKLCEK TNRWFLTCINQPQFRAVLGEVKLCEKMAQF PQFRAVLGEVKLCEKMAQFDAKKFAETQPK R A V E K M 1 0 0 0 1 0 2 1 0 0 2 2 0 0 0 0 0 0 0 2 0 0 11 1 1244.6799 P26641 P26641 202 212 EEF1G Elongation factor 1-gamma yes yes 2 0.031993 110.54 By MS/MS 6.5 0.5 1 1 2 9197200 9197200 0 1795 700 1854 4572;4573 3310 3310 1 84773 0 AVLGEVVLYSGAR VTRWFVTCVRQPEFRAVLGEVVLYSGARPL FRAVLGEVVLYSGARPLSHQPGPEAPALPK R A V A R P 2 1 0 0 0 0 1 2 0 0 2 0 0 0 0 1 0 0 1 3 0 0 13 0 1332.7402 P26640 P26640 202 214 VARS Valine--tRNA ligase yes yes 2 0.00011411 154.24 By MS/MS 3 0 1 1 928670 928670 0 1796 699 1855 4574 3311 3311 1 24243 0 AVLGGLSQTDPR ______________________________ VARAVLGGLSQTDPRAGGGGGGDYGLVTAG R A V P R A 1 1 0 1 0 1 0 2 0 0 2 0 0 0 1 1 1 0 0 1 0 0 12 0 1212.6463 Q8NI37 Q8NI37 14 25 PPTC7 Protein phosphatase PTC7 homolog yes yes 2 0.00094809 133.91 By MS/MS 7.5 0.5 1 1 2 1178900 1178900 0 1797 1977 1856 4575;4576 3312 3312 1 54005 0 AVLGSSPFLSEANAER VAKKSLRSEDPSGKKAVLGSSPFLSEANAE VLGSSPFLSEANAERIVRTLCKVRGAALKL K A V E R I 3 1 1 0 0 0 2 1 0 0 2 0 0 1 1 3 0 0 0 1 0 0 16 0 1646.8264 Q8NI60 Q8NI60 247 262 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 3.8417E-21 227.06 By MS/MS 7 0.816 1 1 1 3 18660000 18660000 0 1798 1978 1857 4577;4578;4579 3313;3314;3315 3315 3 203870 0 AVLGSVER KGQAGALERPVLIHRAVLGSVERLLGVLAE RPVLIHRAVLGSVERLLGVLAESCGGKWPL R A V E R L 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 829.46577 Q9BW92 Q9BW92 587 594 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0063455 132.08 By MS/MS 5.5 0.5 1 1 2 8501000 8501000 0 1799 2391 1858 4580;4581 3316;3317 3316 2 300890 0 AVLIAGQPGTGK GVVLEMIREGKIAGRAVLIAGQPGTGKTAI AGRAVLIAGQPGTGKTAIAMGMAQALGPDT R A V G K T 2 0 0 0 0 1 0 3 0 1 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1110.6397 Q9Y230 Q9Y230 72 83 RUVBL2 RuvB-like 2 yes yes 2 0.0093514 120.09 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 70544000 70371000 173190 1800 2864 1859 4582;4583;4584;4585;4586;4587 3318;3319 3318 1 863570 531170 AVLICLAQLGEPELR AIRHTPLPQQRHVSKAVLICLAQLGEPELR AVLICLAQLGEPELRDSRDELLASMMAGVK K A V L R D 2 1 0 0 1 1 2 1 0 1 4 0 0 0 1 0 0 0 0 1 0 0 15 0 1680.9233 Q9Y4R8 Q9Y4R8 363 377 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 2.5766E-10 191.53 By MS/MS 4 0 1 1 249460 249460 0 1801 2958 1860 4588 3320 3320 1 6809.9 0 AVLIDKDQSPK SQACMRGHDFHEGVRAVLIDKDQSPKWKPA EGVRAVLIDKDQSPKWKPADLKEVTEEDLN R A V P K W 1 0 0 2 0 1 0 0 0 1 1 2 0 0 1 1 0 0 0 1 0 0 11 1 1212.6714 Q6NVY1 Q6NVY1 348 358 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 1.6976E-05 176.6 By MS/MS 7.5 0.5 1 1 2 2486700 2486700 0 1802 1693 1861 4589;4590 3321 3321 1 63682 0 AVLLAGPPGTGK GVIVELIKSKKMAGRAVLLAGPPGTGKTAL AGRAVLLAGPPGTGKTALALAIAQELGSKV R A V G K T 2 0 0 0 0 0 0 3 0 0 2 1 0 0 2 0 1 0 0 1 0 0 12 0 1079.6339 Q9Y265 Q9Y265 65 76 RUVBL1 RuvB-like 1 yes yes 2 0.0027078 117.53 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 69755000 69657000 97767 1803 2870 1862 4591;4592;4593;4594;4595;4596 3322 3322 1 887050 299840 AVLLDLEPR DVFFYQADDEHYIPRAVLLDLEPRVIHSIL EHYIPRAVLLDLEPRVIHSILNSPYAKLYN R A V P R V 1 1 0 1 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 9 0 1024.5917 P23258;Q9NRH3 P23258 64 72 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 0.020851 96.253 By MS/MS 7 0.816 1 1 1 3 15632000 15632000 0 1804 666 1863 4597;4598;4599 3323;3324 3324 2 261270 0 AVLLVGLCDSGK LVFWKLIRSRRSSQRAVLLVGLCDSGKTLL SQRAVLLVGLCDSGKTLLFVRLLTGLYRDT R A V G K T 1 0 0 1 1 0 0 2 0 0 3 1 0 0 0 1 0 0 0 2 0 0 12 0 1230.6642 Q9Y5M8 Q9Y5M8 66 77 SRPRB Signal recognition particle receptor subunit beta yes yes 2 0.00024909 150.35 By MS/MS 9 0.816 1 1 1 3 17242000 17242000 0 1805 2976 1864 4600;4601;4602 3325;3326;3327 3325 3 2026800 0 AVLNLLR SQAYDNLSLSDHLLRAVLNLLRREVSEHGR SLSDHLLRAVLNLLRREVSEHGRHLQQYFN R A V L R R 1 1 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 797.51232 Q93008 Q93008 2159 2165 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.02164 121.87 By MS/MS 3 1.41 1 1 1 1 1 5 798460 798460 0 1806 2096 1865 4603;4604;4605;4606;4607 3328 3328 1 29408 0 AVLNPLCQVDYR PIQYEPVLCSRTTCRAVLNPLCQVDYRAKL TCRAVLNPLCQVDYRAKLWACNFCYQRNQF R A V Y R A 1 1 1 1 1 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 12 0 1446.7289 Q15436;Q15437 Q15436 68 79 SEC23A;SEC23B Protein transport protein Sec23A;Protein transport protein Sec23B no no 2 0.00052237 138.76 By MS/MS 5 0 1 1 1717700 1717700 0 1807 1502;1503 1866 4608 3329 3329 1 70606 0 AVLPVAESFGFADEIR LQEEMKEGTDMFIIKAVLPVAESFGFADEI VLPVAESFGFADEIRKRTSGLASPQLVFSH K A V I R K 3 1 0 1 0 0 2 1 0 1 1 0 0 2 1 1 0 0 0 2 0 0 16 0 1719.8832 Q7Z2Z2 Q7Z2Z2 1026 1041 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 2 0.0075576 98.368 By MS/MS 3 0 1 1 72684 72684 0 1808 1779 1867 4609 3330 3330 1 1897.4 0 AVLQAAR AVITVPVFFNQAERRAVLQAARMAGLKVLQ FFNQAERRAVLQAARMAGLKVLQLINDNTA R A V A R M 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 727.43407 Q9Y4L1 Q9Y4L1 187 193 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.030601 114.54 By MS/MS 2 0.816 1 1 1 3 577690 577690 0 1809 2955 1868 4610;4611;4612 3331 3331 1 18131 0 AVLQEFGR PLDLTDTGSHEAATKAVLQEFGRIDILVNN SHEAATKAVLQEFGRIDILVNNGGMSQRSL K A V G R I 1 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 918.49232 Q9Y394 Q9Y394 124 131 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 2 0.022264 103.83 By MS/MS 8 0 1 1 2297500 2297500 0 1810 2919 1869 4613 3332 3332 1 151560 0 AVLSAEQLRDEEVHAGLGELLR LVSLGGKATTASQAKAVLSAEQLRDEEVHA LRDEEVHAGLGELLRSLSNSTARNVTWKLG K A V L R S 3 2 0 1 0 1 4 2 1 0 5 0 0 0 0 1 0 0 0 2 0 0 22 1 2404.271 P50454 P50454 95 116 SERPINH1 Serpin H1 yes yes 3 2.1534E-05 104.49 By MS/MS 6 0 1 1 15225000 15225000 0 1811 947 1870 4614 3333 3333 1 118720 0 AVLSCIAPSAK YATLIENDSNPEVRRAVLSCIAPSAKTLPK EVRRAVLSCIAPSAKTLPKIVGRTKDVKEA R A V A K T 3 0 0 0 1 0 0 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 11 0 1115.6009 Q9BPX3 Q9BPX3 198 208 NCAPG Condensin complex subunit 3 yes yes 2 0.00011345 159.79 By MS/MS 4 0 1 1 1006200 1006200 0 1812 2302 1871 4615 3334 3334 1 27469 0 AVLVDLEPGTMDSVR NVYYNEATGGKYVPRAVLVDLEPGTMDSVR AVLVDLEPGTMDSVRSGPFGQIFRPDNFVF R A V V R S 1 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 3 0 0 15 0 1600.8131 P68371;P04350;Q3ZCM7 P68371 63 77 TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain no no 2 7.8809E-16 214.04 By MS/MS By MS/MS 6.75 2.56 2 5 2 3 2 2 13 3 236060000 235280000 783480 1813 1187;451;1572 1872;1873 4616;4617;4618;4619;4620;4621;4622;4623;4624;4625;4626;4627;4628;4629;4630;4631 3335;3336;3337;3338;3339;3340;3341;3342;3343;3344;3345;3346;3347;3348;3349;3350;3351;3352 3348 232 18 7229600 3066200 AVMSNLSAHGVK DGNQYVREAADDCAKAVMSNLSAHGVKLVL CAKAVMSNLSAHGVKLVLPSLLAALEEESW K A V V K L 2 0 1 0 0 0 0 1 1 0 1 1 1 0 0 2 0 0 0 2 0 0 12 0 1212.6285 Q92616 Q92616 1485 1496 GCN1L1 Translational activator GCN1 yes yes 2;3 0.0092781 92.112 By MS/MS 1.5 0.5 2 2 4 1172400 1172400 0 1814 2068 1874 4632;4633;4634;4635 3353;3354 3353 1341 2 58141 0 AVMTSIK PDHMVLGKRLKGAFKAVMTSIKQLSSEELE KRLKGAFKAVMTSIKQLSSEELEQFQKTGT K A V I K Q 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 1 0 0 1 0 0 7 0 748.41531 P41252 P41252 911 917 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.033658 101.69 By MS/MS 3 0 1 1 422610 422610 0 1815 840 1875 4636 3355 3355 592 1 11032 0 AVNHANTAK CKVTSRFAHNVVTTRAVNHANTAKEVSFDV NVVTTRAVNHANTAKEVSFDVELPKTAFIT R A V A K E 3 0 2 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 9 0 924.47773 CON__Q0V8M9 CON__Q0V8M9 67 75 yes yes 2 0.004972 115.71 By MS/MS 9 0.816 1 1 1 3 89229 89229 0 + 1816 55 1876 4637;4638;4639 3356 3356 1 52953 0 AVNTLNEALEFAK SAVLDELKVAQAPWKAVNTLNEALEFAKSV WKAVNTLNEALEFAKSVDYPCLLRPSYVLS K A V A K S 3 0 2 0 0 0 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 13 0 1418.7405 P31327 P31327 1108 1120 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 2 1.545E-07 182.41 By MS/MS 3 0 1 1 387130 387130 0 1817 752 1877 4640 3357 3357 1 10106 0 AVNTQALSGAGILR DPDLRQFLESSELPRAVNTQALSGAGILRM RAVNTQALSGAGILRMVNKAADAVNKMTIK R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 4.7698E-12 201.38 By MS/MS 5 0 1 1 2599300 2599300 0 1818 262 1878 4641 3358 3358 1 106840 0 AVNVYSTSVTSDNLSR ______________________________ VNVYSTSVTSDNLSRHDMLAWINESLQLNL M A V S R H 1 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 2 0 1 3 0 0 16 0 1711.8377 Q15691 Q15691 2 17 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2 4.8227E-08 167.73 By MS/MS 8 0 1 1 1537500 1537500 0 1819 1513 1879 4642 3359 3359 1 101430 0 AVPLALALISVSNPR TFGHLLRYGEPTLRRAVPLALALISVSNPR AVPLALALISVSNPRLNILDTLSKFSHDAD R A V P R L 3 1 1 0 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 2 0 0 15 0 1519.9086 Q13200 Q13200 689 703 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.014628 85.355 By MS/MS 4 0 1 1 217300 217300 0 1820 1347 1880 4643 3360 3360 1 5932 0 AVQADQERER KQCKQCANKVLQHMKAVQADQERERQRRLE LQHMKAVQADQERERQRRLEVEREAEKKRE K A V E R Q 2 2 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 10 1 1200.5847 Q96AG4 Q96AG4 150 159 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.006892 125.97 By MS/MS By matching 8 0 2 1 1 432620 418300 14319 1821 2121 1881 4644;4645 3361 3361 1 27595 122160 AVQEDEVGVPGSNSADLLR HEGGENISASPLTSKAVQEDEVGVPGSNSA DEVGVPGSNSADLLRWTTATTMKVLSNTTT K A V L R W 2 1 1 2 0 1 2 2 0 0 2 0 0 0 1 2 0 0 0 3 0 0 19 0 1954.9596 A2RRP1 A2RRP1 1390 1408 NBAS Neuroblastoma-amplified sequence yes yes 2 0.038892 74.853 By MS/MS 1.5 0.5 1 1 2 456850 456850 0 1822 10 1882 4646;4647 3362 3362 1 22455 0 AVQELWLR EMCGRSPAHYAGYWKAVQELWLRLYQSNLV HYAGYWKAVQELWLRLYQSNLVLVSAINGA K A V L R L 1 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 8 0 1013.5658 P42126 P42126 127 134 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 2 0.022472 103.56 By MS/MS 8 0 1 1 556690 556690 0 1823 844 1883 4648 3363 3363 1 36724 0 AVQESAAQLSMTLK ______________________________ MAVQESAAQLSMTLKVQEYPTLKVPYETLN M A V L K V 3 0 0 0 0 2 1 0 0 0 2 1 1 0 0 2 1 0 0 1 0 0 14 0 1475.7654 Q7L5Y9 Q7L5Y9 2 15 MAEA Macrophage erythroblast attacher yes yes 2 1.1072E-08 188.09 By MS/MS 7 0 1 1 1280100 1280100 0 1824 1769 1884 4649 3364 3364 1254 1 22876 0 AVQFFVQALR YVRGLCLYYEDCIEKAVQFFVQALRMAPDH DCIEKAVQFFVQALRMAPDHEKACIACRNA K A V L R M 2 1 0 0 0 2 0 0 0 0 1 0 0 2 0 0 0 0 0 2 0 0 10 0 1177.6608 Q99615 Q99615 229 238 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.00059145 141.39 By MS/MS 6 0 1 1 1899600 1899600 0 1825 2276 1885 4650 3365 3365 1 14813 0 AVQFTEEK NVKKLAADAGTFLSRAVQFTEEKLGQAEKT AGTFLSRAVQFTEEKLGQAEKTELDAHLEN R A V E K L 1 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 8 0 950.47091 Q9Y371;Q9NR46 Q9Y371 22 29 SH3GLB1;SH3GLB2 Endophilin-B1;Endophilin-B2 yes no 2 0.016674 110.41 By MS/MS 7 0 1 1 823570 823570 0 1826 2914 1886 4651 3366 3366 1 14717 0 AVQGAQQPSLYQIR SHFKRKFIIHRGKRKAVQGAQQPSLYQIRT KAVQGAQQPSLYQIRTNGSALCTRCIQINT K A V I R T 2 1 0 0 0 4 0 1 0 1 1 0 0 0 1 1 0 0 1 1 0 0 14 0 1557.8263 Q13045 Q13045 1047 1060 FLII Protein flightless-1 homolog yes yes 2 2.7236E-06 174.57 By MS/MS 3 0 1 1 698960 698960 0 1827 1328 1887 4652 3367 3367 1 18246 0 AVQGFFTSNNATR LPSTSRRLNHYVLYKAVQGFFTSNNATRDF YKAVQGFFTSNNATRDFLLPFLEEPMDTEA K A V T R D 2 1 2 0 0 1 0 1 0 0 0 0 0 2 0 1 2 0 0 1 0 0 13 0 1411.6844 O43242 O43242 116 128 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 2.1832E-05 168.83 By MS/MS By MS/MS 4.33 2.36 1 2 2 1 16841000 16782000 59653 1828 187 1888 4653;4654;4655 3368;3369;3370;3371;3372 3371 5 151000 182950 AVQGMLDFDYVCSR FSRHTKAIVWGMQTRAVQGMLDFDYVCSRD RAVQGMLDFDYVCSRDEPSVAAMVYPFTGD R A V S R D 1 1 0 2 1 1 0 1 0 0 1 0 1 1 0 1 0 0 1 2 0 0 14 0 1659.7385 P53396 P53396 508 521 ACLY ATP-citrate synthase yes yes 2 0.00010442 141.37 By MS/MS 4 0 1 1 678010 678010 0 1829 1001 1889 4656 3373 3373 756 1 18509 0 AVQISKK ______________________________ ______________________________ M A V K K R 1 0 0 0 0 1 0 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 7 1 772.48069 P23396 P23396 2 8 RPS3 40S ribosomal protein S3 yes yes 2 0.03646 115.46 By MS/MS 9 0.816 1 1 1 3 6907800 6907800 0 1830 668 1890 4657;4658;4659 3374 3374 0 619750 0 AVQLENELENFTK QLEKIQNNSKLLRNKAVQLENELENFTKQF NKAVQLENELENFTKQFLPSSNEES_____ K A V T K Q 1 0 2 0 0 1 3 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 13 0 1533.7675 Q8IWA4 Q8IWA4 719 731 MFN1 Mitofusin-1 yes yes 2 3.6136E-12 210.15 By MS/MS 5 0 1 1 443700 443700 0 1831 1861 1891 4660 3375 3375 1 18238 0 AVSDWLIASVEGR TANGFQMVTSGVQSKAVSDWLIASVEGRLT SKAVSDWLIASVEGRLTGLGGEDLPTIVIV K A V G R L 2 1 0 1 0 0 1 1 0 1 1 0 0 0 0 2 0 1 0 2 0 0 13 0 1401.7252 Q969V3 Q969V3 195 207 NCLN Nicalin yes yes 2 1.6777E-08 194.17 By MS/MS 6 0 1 1 8993900 8993900 0 1832 2109 1892 4661 3376 3376 1 70135 0 AVSEEQQPALK HPPKPAKPEKNRINKAVSEEQQPALKGKKG RINKAVSEEQQPALKGKKGKEEKSKGKAKP K A V L K G 2 0 0 0 0 2 2 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1198.6194 Q8NE71 Q8NE71 164 174 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 2 0.00043323 145.46 By MS/MS 4 0 1 1 455920 455920 0 1833 1963 1893 4662 3377 3377 1 12446 0 AVSGKEPR VTLEDIKEHVKQLEKAVSGKEPRFVLRALR HVKQLEKAVSGKEPRFVLRALRMLPSTSRR K A V P R F 1 1 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 8 1 842.46102 O43242 O43242 85 92 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.035355 137.9 By MS/MS By matching 6.33 0.471 2 1 2 1 4760700 4746600 14172 1834 187 1894 4663;4664;4665 3378 3378 1 37158 43463 AVSISTEPPTYLR SEVEEILDGNDEKYKAVSISTEPPTYLREQ YKAVSISTEPPTYLREQKAKRNSQWVPTLP K A V L R E 1 1 0 0 0 0 1 0 0 1 1 0 0 0 2 2 2 0 1 1 0 0 13 0 1432.7562 Q12824 Q12824 109 121 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 2 0.0028952 114.89 By MS/MS 7 0 1 1 13302000 13302000 0 1835 1308 1895 4666 3379 3379 1 237710 0 AVSTGVKVPR ______________________________ ______________________________ M A V P R N 1 1 0 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 0 3 0 0 10 1 1012.6029 Q15819 Q15819 2 11 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 2 0.010048 112.11 By MS/MS 10 0 1 1 497040 497040 0 1836 1525 1896 4667 3380 3380 1 528300 0 AVSVTPIRDTK ______________________________ ______________________________ M A V T K W 1 1 0 1 0 0 0 0 0 1 0 1 0 0 1 1 2 0 0 2 0 0 11 1 1185.6717 Q9NR56 Q9NR56 2 12 MBNL1 Muscleblind-like protein 1 yes yes 2 0.00024286 163.88 By MS/MS 7 0 1 1 4572300 4572300 0 1837 2602 1897 4668 3381 3381 1 81708 0 AVTDFTSEVTYDPAGR RITDSPEEIVQKFRKAVTDFTSEVTYDPAG VTDFTSEVTYDPAGRAGVSNIVAVHAAVTG K A V G R A 2 1 0 2 0 0 1 1 0 0 0 0 0 1 1 1 3 0 1 2 0 0 16 0 1727.8002 Q9UGM6 Q9UGM6 254 269 WARS2 Tryptophan--tRNA ligase, mitochondrial yes yes 2 0.00011612 174.23 By MS/MS 7 0 1 1 987640 987640 0 1838 2773 1898 4669 3382 3382 1 17649 0 AVTEGAQAVEEPSIC DSISRASQTMAKCVKAVTEGAQAVEEPSIC AVTEGAQAVEEPSIC_______________ K A V I C - 3 0 0 0 1 1 3 1 0 1 0 0 0 0 1 1 1 0 0 2 0 0 15 0 1559.7137 P28331 P28331 713 727 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 5.1438E-07 159.99 By MS/MS 5 0 1 1 1838100 1838100 0 1839 718 1899 4670 3383 3383 1 75555 0 AVTELNEPLSNEDR AEQAERYDDMASAMKAVTELNEPLSNEDRN KAVTELNEPLSNEDRNLLSVAYKNVVGARR K A V D R N 1 1 2 1 0 0 3 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1585.7584 Q04917 Q04917 29 42 YWHAH 14-3-3 protein eta yes yes 2 1.0566E-59 304.89 By MS/MS 8 0 1 1 2788800 2788800 0 1840 1268 1900 4671 3384 3384 1 183970 0 AVTELNEPLSNEDRNLLSVAYK AEQAERYDDMASAMKAVTELNEPLSNEDRN PLSNEDRNLLSVAYKNVVGARRSSWRVISS K A V Y K N 2 1 3 1 0 0 3 0 0 0 4 1 0 0 1 2 1 0 1 2 0 0 22 1 2474.2653 Q04917 Q04917 29 50 YWHAH 14-3-3 protein eta yes yes 3 0.00028259 83.666 By MS/MS 8 0 1 1 333280 333280 0 1841 1268 1901 4672 3385 3385 1 21987 0 AVTEQGAELSNEER AEQAERYDDMATCMKAVTEQGAELSNEERN KAVTEQGAELSNEERNLLSVAYKNVVGGRR K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1531.7114 P27348 P27348 28 41 YWHAQ 14-3-3 protein theta yes yes 2 7.0721E-73 309.35 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 17371000 17323000 48165 1842 703 1902 4673;4674;4675;4676 3386;3387;3388 3387 3 1384600 410910 AVTEQGHELSNEER AEQAERYDDMAAAMKAVTEQGHELSNEERN KAVTEQGHELSNEERNLLSVAYKNVVGARR K A V E R N 1 1 1 0 0 1 4 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1597.7332 P31946 P31946 30 43 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2;3 1.3835E-46 283.47 By MS/MS By matching 8 0 3 2 1 7888900 7855000 33898 1843 760 1903 4677;4678;4679 3389;3390 3390 2 518190 289190 AVTEVLAR DDFKEMEKKVDVTSKAVTEVLARTIEYLQP KVDVTSKAVTEVLARTIEYLQPNPASRAKL K A V A R T 2 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 8 0 857.49707 Q99961 Q99961 46 53 SH3GL1 Endophilin-A2 yes yes 2 0.011957 117.16 By MS/MS 7 0 1 1 1491300 1491300 0 1844 2299 1904 4680 3391 3391 1 26649 0 AVTHTSPEDVSFAESR FLLKGRLQQVLTGLRAVTHTSPEDVSFAES VTHTSPEDVSFAESRRDGLKAIARICQTVG R A V S R R 2 1 0 1 0 0 2 0 1 0 0 0 0 1 1 3 2 0 0 2 0 0 16 0 1731.8064 Q9BTW9 Q9BTW9 800 815 TBCD Tubulin-specific chaperone D yes yes 2 9.5161E-06 139.46 By MS/MS 4 0 1 1 496650 496650 0 1845 2354 1905 4681 3392 3392 1 13558 0 AVTIFIR TKDKMLVIEQCKNSRAVTIFIRGGNKMIIE IEQCKNSRAVTIFIRGGNKMIIEEAKRSLH R A V I R G 1 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 7 0 818.50142 P48643 P48643 382 388 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.011025 151.17 By MS/MS By matching 7.29 1.67 1 2 1 1 1 1 6 1 42992000 42887000 105240 1846 909 1906 4682;4683;4684;4685;4686;4687;4688 3393;3394;3395;3396 3394 4 478110 322770 AVTLDKDAYYR ______________________________ ______________________________ M A V Y R R 2 1 0 2 0 0 0 0 0 0 1 1 0 0 0 0 1 0 2 1 0 0 11 1 1313.6616 Q9Y5B9 Q9Y5B9 2 12 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00072806 152.54 By MS/MS 2.5 1.12 1 1 1 1 4 5373900 5373900 0 1847 2968 1907 4689;4690;4691;4692 3397;3398;3399 3399 3 187070 0 AVTLDKDAYYRR ______________________________ ______________________________ M A V R R V 2 2 0 2 0 0 0 0 0 0 1 1 0 0 0 0 1 0 2 1 0 0 12 2 1469.7627 Q9Y5B9 Q9Y5B9 2 13 SUPT16H FACT complex subunit SPT16 yes yes 3 0.012931 79.201 By MS/MS 2.5 1.12 1 1 1 1 4 2214500 2214500 0 1848 2968 1908 4693;4694;4695;4696 3400;3401 3400 2 72369 0 AVTQALNR PGDPESQQRLAQVAKAVTQALNRCVSCLPG RLAQVAKAVTQALNRCVSCLPGQRDVDNAL K A V N R C 2 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 871.48756 Q9Y490 Q9Y490 1191 1198 TLN1 Talin-1 yes yes 2 0.0028561 151.04 By MS/MS 3.2 1.72 1 1 1 1 1 5 4107600 4107600 0 1849 2947 1909 4697;4698;4699;4700;4701 3402;3403 3402 2 96781 0 AVTVYDKPASFFK TNAMREDLADNWHIRAVTVYDKPASFFKET IRAVTVYDKPASFFKETPLDLQHRLFMKLG R A V F K E 2 0 0 1 0 0 0 0 0 0 0 2 0 2 1 1 1 0 1 2 0 0 13 1 1471.7711 Q9BT22 Q9BT22 211 223 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 0.00035678 159.09 By MS/MS 6 0 1 1 5062200 5062200 0 1850 2344 1910 4702 3404 3404 1 39475 0 AVVAQAVR VWLEAARLQPGDTAKAVVAQAVRHLPQSVR QPGDTAKAVVAQAVRHLPQSVRIYIRAAEL K A V V R H 3 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 8 0 812.48684 O94906 O94906 360 367 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0088361 122.79 By MS/MS 4.5 0.5 1 1 2 1331900 1331900 0 1851 358 1911 4703;4704 3405 3405 1 38462 0 AVVEGLWLR LSVLTSYPILHFCGRAVVEGLWLRYQGVPV LHFCGRAVVEGLWLRYQGVPVEEDVGRERR R A V L R Y 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 1 0 2 0 0 9 0 1041.5971 Q9NVC3 Q9NVC3 345 353 SLC38A7 Putative sodium-coupled neutral amino acid transporter 7 yes yes 2 0.0094345 106.04 By MS/MS 1 0 1 1 62485 62485 0 1852 2648 1912 4705 3406 3406 1 3052.9 0 AVVGVVAGGGR KLPSGSKKVISSANRAVVGVVAGGGRIDKP SANRAVVGVVAGGGRIDKPILKAGRAYHKY R A V G R I 2 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 11 0 940.54541 P62917 P62917 164 174 RPL8 60S ribosomal protein L8 yes yes 2 3.1753E-05 172.14 By MS/MS By matching 8.33 0.471 2 1 2 1 3129800 2983000 146770 1853 1162 1913 4706;4707;4708 3407 3407 1 253750 1252100 AVVIVDDR ELLEEAFSQFGPIERAVVIVDDRGRSTGKG QFGPIERAVVIVDDRGRSTGKGIVEFASKP R A V D R G 1 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 8 0 885.49198 P23246;Q15233 P23246 400 407 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 2 0.020312 106.36 By MS/MS By matching 6 0 2 1 1 6724100 6693300 30826 1854 665;1487 1914 4709;4710 3408 3408 1 52195 94541 AVVIVDDRGR ELLEEAFSQFGPIERAVVIVDDRGRSTGKG GPIERAVVIVDDRGRSTGKGIVEFASKPAA R A V G R S 1 2 0 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 3 0 0 10 1 1098.6146 P23246;Q15233 P23246 400 409 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 2 0.0063418 129.42 By MS/MS 4 0 1 1 354630 354630 0 1855 665;1487 1915 4711 3409 3409 1 9681.1 0 AVVLAANHFGR GYDALSSMANIAGYKAVVLAANHFGRFFTG AGYKAVVLAANHFGRFFTGQITAAGKVPPA K A V G R F 3 1 1 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 2 0 0 11 0 1153.6356 Q13423 Q13423 203 213 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.015792 93.143 By MS/MS 1 0 1 1 118880 118880 0 1856 1367 1916 4712 3410 3410 1 5808.4 0 AVVQVFEGTSGIDAK GTKRSGQVLEVSGSKAVVQVFEGTSGIDAK AVVQVFEGTSGIDAKKTSCEFTGDILRTPV K A V A K K 2 0 0 1 0 1 1 2 0 1 0 1 0 1 0 1 1 0 0 3 0 0 15 0 1519.7882 P21281 P21281 94 108 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 2 6.093E-21 228.7 By MS/MS 6 0 1 1 3016100 3016100 0 1857 647 1917 4713 3411 3411 1 23520 0 AVVVDITEHCH AAGAGTGYFLFSWKKAVVVDITEHCH____ SWKKAVVVDITEHCH_______________ K A V C H - 1 0 0 1 1 0 1 0 2 1 0 0 0 0 0 0 1 0 0 3 0 0 11 0 1278.6027 O15431 O15431 180 190 SLC31A1 High affinity copper uptake protein 1 yes yes 2 0.0065959 101.43 By MS/MS 8 0 1 1 332570 332570 0 1858 177 1918 4714 3412 3412 1 21940 0 AVVVNAAQLASYSQSK GVLTLWRGCIPTMARAVVVNAAQLASYSQS VVVNAAQLASYSQSKQFLLDSGYFSDNILC R A V S K Q 4 0 1 0 0 2 0 0 0 0 1 1 0 0 0 3 0 0 1 3 0 0 16 0 1634.8628 Q02978 Q02978 191 206 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2;3 1.5117E-63 301.35 By MS/MS By MS/MS 6.55 2.9 1 1 1 1 5 1 1 9 2 55637000 55486000 151820 1859 1260 1919 4715;4716;4717;4718;4719;4720;4721;4722;4723;4724;4725 3413;3414;3415;3416;3417;3418;3419;3420 3419 8 4357100 1295200 AVYSTNCPVWEEAFR PMVQLSIQDVTQESKAVYSTNCPVWEEAFR AVYSTNCPVWEEAFRFFLQDPQSQELDVQV K A V F R F 2 1 1 0 1 0 2 0 0 0 0 0 0 1 1 1 1 1 1 2 0 0 15 0 1827.825 Q9BSJ8 Q9BSJ8 516 530 ESYT1 Extended synaptotagmin-1 yes yes 2 3.8517E-07 164.22 By MS/MS 4.5 1.12 1 1 1 1 4 2016000 2016000 0 1860 2339 1920 4726;4727;4728;4729 3421;3422 3422 2 50192 0 AVYTQDCPLAAAK KKAEEIANEMIEAAKAVYTQDCPLAAAKAI AKAVYTQDCPLAAAKAIQGLRAVFDETYPD K A V A K A 4 0 0 1 1 1 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 13 0 1406.6864 P49588 P49588 665 677 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 6.254E-08 190.26 By MS/MS 4.5 0.5 1 1 2 3787900 3787900 0 1861 921 1921 4730;4731 3423;3424 3423 2 121220 0 AWDQEAEGAGPELGLR AGNLKPVWASRGCPRAWDQEAEGAGPELGL WDQEAEGAGPELGLRVARTKALWLPMGD__ R A W L R V 3 1 0 1 0 1 3 3 0 0 2 0 0 0 1 0 0 1 0 0 0 0 16 0 1697.8009 Q8IZ83 Q8IZ83 774 789 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2 1.7246E-08 175.6 By MS/MS 5 0 1 1 663650 663650 0 1862 1886 1922 4732 3425 3425 1 27279 0 AWEVDTCR ADDRQVKIWRMNESKAWEVDTCRGHYNNVS WRMNESKAWEVDTCRGHYNNVSCAVFHPRQ K A W C R G 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 8 0 1035.4444 P53621 P53621 239 246 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.012661 116.25 By MS/MS 2.6 1.02 1 1 2 1 5 3395600 3395600 0 1863 1005 1923 4733;4734;4735;4736;4737 3426;3427;3428 3428 3 102550 0 AWGILTFK RVRPDYTAQNLDHGKAWGILTFKGKTESEA QNLDHGKAWGILTFKGKTESEAREIEHVMY K A W F K G 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 1 0 0 0 0 8 0 934.52764 P82930 P82930 114 121 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.015988 108.46 By MS/MS 8 0 1 1 581200 581200 0 1864 1209 1924 4738 3429 3429 1 38341 0 AWGPGLEGGVVGK FEVKVGTECGNQKVRAWGPGLEGGVVGKSA VRAWGPGLEGGVVGKSADFVVEAIGDDVGT R A W G K S 1 0 0 0 0 0 1 5 0 0 1 1 0 0 1 0 0 1 0 2 0 0 13 0 1225.6455 P21333 P21333 581 593 FLNA Filamin-A yes yes 2 0.0010159 137.95 By MS/MS 3 1.41 1 1 1 1 1 5 3493300 3493300 0 1865 648 1925 4739;4740;4741;4742;4743 3430;3431;3432 3430 3 126950 0 AWTQVLLGQAEDK EIERILGVRLQAGLRAWTQVLLGQAEDKAE LRAWTQVLLGQAEDKAEVDMDTDAPQVSHK R A W D K A 2 0 0 1 0 2 1 1 0 0 2 1 0 0 0 0 1 1 0 1 0 0 13 0 1457.7514 Q14204 Q14204 921 933 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00075618 162.93 By MS/MS 2 0.816 1 1 1 3 490720 490720 0 1866 1421 1926 4744;4745;4746 3433 3433 1 19812 0 AWVNQLETQTGEASK DKSLIINTNPVEVYKAWVNQLETQTGEASK AWVNQLETQTGEASKLPYDVTTEQALTYPE K A W S K L 2 0 1 0 0 2 2 1 0 0 1 1 0 0 0 1 2 1 0 1 0 0 15 0 1660.8057 Q13576 Q13576 1010 1024 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 2.0718E-28 237.07 By MS/MS 3 0 1 1 809670 809670 0 1867 1383 1927 4747 3434 3434 1 21136 0 AYAALTDEESR PDKGGDEVMFMRIAKAYAALTDEESRKNWE RIAKAYAALTDEESRKNWEEFGNPDGPQAT K A Y S R K 3 1 0 1 0 0 2 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 11 0 1224.5622 Q9UGP8 Q9UGP8 148 158 SEC63 Translocation protein SEC63 homolog yes yes 2 0.0015224 154.01 By MS/MS 4.5 0.5 1 1 2 1713400 1713400 0 1868 2775 1928 4748;4749 3435 3435 1 51146 0 AYALAFAER GRVVLVTGAGAGLGRAYALAFAERGALVVV GAGLGRAYALAFAERGALVVVNDLGGDFKG R A Y E R G 4 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 9 0 1010.5185 P51659 P51659 24 32 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 2 0.0047018 116.37 By MS/MS 5 0 1 1 624360 624360 0 1869 974 1929 4750 3436;3437 3436 2 25664 0 AYDATHLVK KAFSGYLGTDQSKWKAYDATHLVKSYPGSQ DQSKWKAYDATHLVKSYPGSQLDILIDQGK K A Y V K S 2 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 1 0 1 1 0 0 9 0 1016.5291 P10768 P10768 201 209 ESD S-formylglutathione hydrolase yes yes 2;3 0.0063188 112.84 By MS/MS 9 0.816 2 2 2 6 6449700 6449700 0 1870 543 1930 4751;4752;4753;4754;4755;4756 3438;3439 3438 2 997870 0 AYELEQSVVK LAYRKNADRDEDKAKAYELEQSVVKLMRGL EDKAKAYELEQSVVKLMRGLLHCMIRQVDK K A Y V K L 1 0 0 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 10 0 1164.6027 P46020 P46020 74 83 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 2 3.8517E-05 172.59 By MS/MS 3 0 1 1 1052800 1052800 0 1871 875 1931 4757 3440 3440 1 27485 0 AYEYVECPIR TCEKKTYSVPAHQERAYEYVECPIRGTAAE AHQERAYEYVECPIRGTAAENKENLDPSNL R A Y I R G 1 1 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 10 0 1298.5965 P53701 P53701 60 69 HCCS Cytochrome c-type heme lyase yes yes 2 0.00030845 152.47 By MS/MS 8 0 1 1 1117700 1117700 0 1872 1006 1932 4758 3441 3441 1 73731 0 AYFMQLQTR VDSTAESCPKCEHPRAYFMQLQTRSADEPM KCEHPRAYFMQLQTRSADEPMTTFYKCCNA R A Y T R S 1 1 0 0 0 2 0 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 9 0 1156.5699 Q9Y2Y1 Q9Y2Y1 77 85 POLR3K DNA-directed RNA polymerase III subunit RPC10 yes yes 2 0.001151 133.23 By MS/MS 10 0 1 1 288680 288680 0 1873 2906 1933 4759 3442 3442 1674 1 306840 0 AYGDRIER ETATLRSGYLLPDTKAYGDRIERMLRLSLN YLLPDTKAYGDRIERMLRLSLNIDPDAKVE K A Y E R M 1 2 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 8 1 978.48829 P14625 P14625 734 741 HSP90B1 Endoplasmin yes yes 2 0.052147 118.74 By MS/MS By matching 4.33 0.471 2 1 2 1 5322300 5286800 35491 1874 589 1934 4760;4761;4762 3443 3443 1 152300 74162 AYGELPEHAK DVILKYNADEARSLKAYGELPEHAKINETD ARSLKAYGELPEHAKINETDTFGPGDDDEI K A Y A K I 2 0 0 0 0 0 2 1 1 0 1 1 0 0 1 0 0 0 1 0 0 0 10 0 1113.5455 P47813;O14602 P47813 105 114 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2 0.00036221 150.36 By MS/MS By matching 9 0 2 1 1 2365400 2297200 68257 1875 116 1935 4763;4764 3444 3444 1 1318400 735610 AYGPGIEPTGNMVK PGAPLRPKLNPKKARAYGPGIEPTGNMVKK RAYGPGIEPTGNMVKKRAEFTVETRSAGQG R A Y V K K 1 0 1 0 0 0 1 3 0 1 0 1 1 0 2 0 1 0 1 1 0 0 14 0 1432.7021 P21333 P21333 286 299 FLNA Filamin-A yes yes 2 0.00014856 141.89 By MS/MS 2.17 1.07 2 2 1 1 6 1823800 1823800 0 1876 648 1936;1937 4765;4766;4767;4768;4769;4770 3445;3446 3446 436 2 85216 0 AYGVCFVDTSLGK LSLKEKEEDSSGHTRAYGVCFVDTSLGKFF TRAYGVCFVDTSLGKFFIGQFSDDRHCSRF R A Y G K F 1 0 0 1 1 0 0 2 0 0 1 1 0 1 0 1 1 0 1 2 0 0 13 0 1415.6755 P52701 P52701 555 567 MSH6 DNA mismatch repair protein Msh6 yes yes 2 1.5817E-07 205.53 By MS/MS 3.5 0.5 1 1 2 2057600 2057600 0 1877 989 1938 4771;4772 3447 3447 1 53933 0 AYHEQLSVAEITNACFEPANQMVK HFPLATYAPVISAEKAYHEQLSVAEITNAC EITNACFEPANQMVKCDPRHGKYMACCLLY K A Y V K C 4 0 2 0 1 2 3 0 1 1 1 1 1 1 1 1 1 0 1 2 0 0 24 0 2749.284 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;P68366 P68363 281 304 TUBA1B;TUBA1A;TUBA3E;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain no no 2;3 2.9817E-09 138.55 By MS/MS 6 0 3 3 47905000 47905000 0 1878 1185;1754;1186 1939;1940 4773;4774;4775 3448;3449;3450 3449 927 3 373570 0 AYHEQLTVAEITNACFEPANQMVK HFPLATYAPVISAEKAYHEQLTVAEITNAC EITNACFEPANQMVKCDPRHGKYMACCLLY K A Y V K C 4 0 2 0 1 2 3 0 1 1 1 1 1 1 1 0 2 0 1 2 0 0 24 0 2763.2996 Q9BQE3 Q9BQE3 281 304 TUBA1C Tubulin alpha-1C chain yes yes 3 0.0040927 63.63 By MS/MS 6 0 1 1 8627200 8627200 0 1879 2314 1941 4776 3451 3451 1460 1 67275 0 AYIASAGADALAK KLDESIYDVAFHSSKAYIASAGADALAKVF SKAYIASAGADALAKVFV____________ K A Y A K V 6 0 0 1 0 0 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 13 0 1220.6401 Q13033 Q13033 782 794 STRN3 Striatin-3 yes yes 2 2.6561E-05 167.09 By MS/MS 4 0 1 1 1447900 1447900 0 1880 1326 1942 4777 3452 3452 1 39526 0 AYIDSFR TERALHHGIDLEKIKAYIDSFRFGAPPHAG GIDLEKIKAYIDSFRFGAPPHAGGGIGLER K A Y F R F 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 7 0 870.42357 P14868 P14868 454 460 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.047712 102.71 By MS/MS 6 0 1 1 3088800 3088800 0 1881 594 1943 4778 3453 3453 1 24086 0 AYILNLVK VSDYAQMDRVLREERAYILNLVKQIKKTGC RVLREERAYILNLVKQIKKTGCNVLLIQKS R A Y V K Q 1 0 1 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 1 0 0 8 0 932.5695 P50991 P50991 281 288 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0013471 167.25 By MS/MS By matching 5.14 2.23 1 1 1 2 1 1 6 1 133930000 133890000 42961 1882 956 1944 4779;4780;4781;4782;4783;4784;4785 3454;3455;3456;3457;3458;3459 3457 6 1299500 131760 AYIQENLELVEK HGGGPTVTAGLPLPKAYIQENLELVEKGFS LPKAYIQENLELVEKGFSNLKKQIENARMF K A Y E K G 1 0 1 0 0 1 3 0 0 1 2 1 0 0 0 0 0 0 1 1 0 0 12 0 1447.7559 P11586 P11586 722 733 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00030715 147.62 By MS/MS 4 0 1 1 1247100 1247100 0 1883 556 1945 4786 3460 3460 1 34044 0 AYLEGTCVEWLR TQRKLEAARAAEQLRAYLEGTCVEWLRRYL QLRAYLEGTCVEWLRRYLENGKETLQRAEP R A Y L R R 1 1 0 0 1 0 2 1 0 0 2 0 0 0 0 0 1 1 1 1 0 0 12 0 1495.7129 P10321 P10321 182 193 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 9.0959E-05 157.78 By MS/MS 7.5 0.5 1 1 2 1429800 1429800 0 1884 536 1946 4787;4788 3461 3461 1 29160 0 AYLLGKEDAAR ______________________________ LTVKAYLLGKEDAAREIRRFSFCCSPEPEA K A Y A R E 3 1 0 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 11 1 1205.6404 Q13501 Q13501 8 18 SQSTM1 Sequestosome-1 yes yes 2 0.041455 105.17 By MS/MS By matching 6 0 2 1 1 3123300 3102900 20370 1885 1375 1947 4789;4790 3462 3462 1 24196 62473 AYLPQELLGK VSALSQTGSLFKPRKAYLPQELLGKEGFDA FKPRKAYLPQELLGKEGFDALDPFIPILVS K A Y G K E 1 0 0 0 0 1 1 1 0 0 3 1 0 0 1 0 0 0 1 0 0 0 10 0 1130.6336 P51398 P51398 322 331 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0089964 100.02 By MS/MS 7.5 0.5 1 1 2 2680600 2680600 0 1886 963 1948 4791;4792 3463 3463 1 52468 0 AYLYLDEAHSIGALGPTGR IVRLPEVIALKKKYKAYLYLDEAHSIGALG LDEAHSIGALGPTGRGVVEYFGLDPEDVDV K A Y G R G 3 1 0 1 0 0 1 3 1 1 3 0 0 0 1 1 1 0 2 0 0 0 19 0 2003.0112 O15270 O15270 339 357 SPTLC2 Serine palmitoyltransferase 2 yes yes 3 0.050905 61.127 By MS/MS 6 0 1 1 2647500 2647500 0 1887 166 1949 4793 3464 3464 1 20645 0 AYPAAITILETAQK DARGMTPFMSAVSGRAYPAAITILETAQKI RAYPAAITILETAQKIAKAEISSSEKEEDV R A Y Q K I 4 0 0 0 0 1 1 0 0 2 1 1 0 0 1 0 2 0 1 0 0 0 14 0 1488.8188 O95071 O95071 1125 1138 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 1.6234E-08 227.36 By MS/MS 3 1.41 1 1 1 1 1 5 1069600 1069600 0 1888 364 1950 4794;4795;4796;4797;4798 3465;3466;3467;3468 3467 4 43719 0 AYPEVLAQGR ASLQATLLGLAALNKAYPEVLAQGRTARVT AALNKAYPEVLAQGRTARVTLTSPWPRPLP K A Y G R T 2 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 10 0 1102.5771 Q8N2G8 Q8N2G8 141 150 GHDC GH3 domain-containing protein yes yes 2 0.0050913 107.15 By MS/MS 6 0 1 1 3193000 3193000 0 1889 1905 1951 4799 3469 3469 1 24899 0 AYQCVVLLQGK ESKKRFDTEEEFKKRAYQCVVLLQGKNPDI FKKRAYQCVVLLQGKNPDITKAWKLICDVS R A Y G K N 1 0 0 0 1 2 0 1 0 0 2 1 0 0 0 0 0 0 1 2 0 0 11 0 1277.6802 P54136 P54136 290 300 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00019694 155.07 By MS/MS 5 0 1 1 4916400 4916400 0 1890 1013 1952 4800 3470 3470 1 202080 0 AYQDRYQDLGAYSSAR QNCIKEVEQFTQVAKAYQDRYQDLGAYSSA YQDRYQDLGAYSSARKCLAKQRQRMLQERK K A Y A R K 3 2 0 2 0 2 0 1 0 0 1 0 0 0 0 2 0 0 3 0 0 0 16 1 1862.8547 O96000 O96000 132 147 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.0066989 83.37 By MS/MS 9 0 1 1 2118200 2118200 0 1891 417 1953 4801 3471 3471 1 1215600 0 AYQFAGR DNMKYASWAASQINRAYQFAGRSKKETKYS WAASQINRAYQFAGRSKKETKYSLKAVEDM R A Y G R S 2 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 7 0 811.39769 Q15006 Q15006 267 273 EMC2 ER membrane protein complex subunit 2 yes yes 2 0.03532 111.28 By MS/MS 8 0 1 1 1752700 1752700 0 1892 1459 1954 4802 3472 3472 1 115620 0 AYQHGGVTGLSQY IDVALSQDSTYQGERAYQHGGVTGLSQY__ ERAYQHGGVTGLSQY_______________ R A Y Q Y - 1 0 0 0 0 2 0 3 1 0 1 0 0 0 0 1 1 0 2 1 0 0 13 0 1379.647 Q92900 Q92900 1117 1129 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.018305 93.442 By MS/MS 3 0 1 1 0 0 0 1893 2088 1955 4803 3473 3473 1 0 0 AYQKQPTIFQNK ______________________________ TERAYQKQPTIFQNKKRVLLGETGKEKLPR R A Y N K K 1 0 1 0 0 3 0 0 0 1 0 2 0 1 1 0 1 0 1 0 0 0 12 1 1464.7725 P62280 P62280 9 20 RPS11 40S ribosomal protein S11 yes yes 2;3 6.1536E-10 197.21 By MS/MS 8.67 0.471 1 2 3 2724500 2724500 0 1894 1127 1956 4804;4805;4806 3474;3475 3475 2 1461900 0 AYSDQAIVNLLK KALLDNTKDKNTVVRAYSDQAIVNLLKMRQ VVRAYSDQAIVNLLKMRQGEEVFQSLSKIL R A Y L K M 2 0 1 1 0 1 0 0 0 1 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1333.7242 Q92616 Q92616 2610 2621 GCN1L1 Translational activator GCN1 yes yes 2 5.1755E-33 260.98 By MS/MS 2.5 1.12 1 1 1 1 4 2631200 2631200 0 1895 2068 1957 4807;4808;4809;4810 3476;3477;3478 3477 3 99516 0 AYSIVIR SNASSYLTSASSLARAYSIVIRQISDLMGL TSASSLARAYSIVIRQISDLMGLIPKYNHL R A Y I R Q 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 1 1 0 0 7 0 820.48069 O95071 O95071 1787 1793 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.013964 143.02 By MS/MS 2 0.816 1 1 1 3 765050 765050 0 1896 364 1958 4811;4812;4813 3479;3480 3479 2 32631 0 AYSSFGGGR ______________________________ DTYDDRAYSSFGGGRGSRGSAGGHGSRSQK R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.021626 95.815 By MS/MS 8 0 1 1 1012500 1012500 0 1897 1474 1959 4814 3481 3481 1 66793 0 AYTGFSSNSER STRETPSQENGPTAKAYTGFSSNSERGTEA PTAKAYTGFSSNSERGTEAGQVGEPGIPTG K A Y E R G 1 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 1 0 1 0 0 0 11 0 1217.5313 O15355 O15355 210 220 PPM1G Protein phosphatase 1G yes yes 2 0.0047656 115.57 By MS/MS 5 0 1 1 1251000 1251000 0 1898 170 1960 4815 3482 3482 1 51422 0 AYVDDTPAEQMK ETIMKYAEKLIQEGKAYVDDTPAEQMKAER EGKAYVDDTPAEQMKAEREQRIDSKHRKNP K A Y M K A 2 0 0 2 0 1 1 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 12 0 1366.6075 P07814 P07814 289 300 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 7.5199E-44 275.63 By MS/MS 3 0 2 2 1315200 1315200 0 1899 493 1961;1962 4816;4817 3483;3484;3485 3483 285 3 34334 0 AYVEANQMLGDLIK AHSMGLGSKFKEVKKAYVEANQMLGDLIKV KAYVEANQMLGDLIKVTPSSKIVGDLAQFM K A Y I K V 2 0 1 1 0 1 1 1 0 1 2 1 1 0 0 0 0 0 1 1 0 0 14 0 1563.7967 P11498 P11498 893 906 PC Pyruvate carboxylase, mitochondrial yes yes 2 8.0888E-08 179.67 By MS/MS 4 0 1 1 220170 220170 0 1900 555 1963 4818 3486 3486 1 6010.5 0 AYVEQIEK TCPVAKEIIYTLKERAYVEQIEKAFNYASK IYTLKERAYVEQIEKAFNYASKVLLDFLME R A Y E K A 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 8 0 978.50221 Q9BSJ2 Q9BSJ2 483 490 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.039775 95.358 By MS/MS 4 0 1 1 1385300 1385300 0 1901 2338 1964 4819 3487 3487 1 37816 0 AYVLLGDDSFLER GVGAGIDSYYEYLLKAYVLLGDDSFLERFN LKAYVLLGDDSFLERFNTHYDAIMRYISQP K A Y E R F 1 1 0 2 0 0 1 1 0 0 3 0 0 1 0 1 0 0 1 1 0 0 13 0 1496.7511 Q9BZQ6 Q9BZQ6 302 314 EDEM3 ER degradation-enhancing alpha-mannosidase-like protein 3 yes yes 2 4.3336E-05 160.91 By MS/MS 4 0 1 1 127270 127270 0 1902 2426 1965 4820 3488 3488 1 3474.3 0 AYVPALQMAFK FLLSLPHNIIELDVRAYVPALQMAFKLGLS LDVRAYVPALQMAFKLGLSYTPLAEVGLNA R A Y F K L 3 0 0 0 0 1 0 0 0 0 1 1 1 1 1 0 0 0 1 1 0 0 11 0 1237.6529 P78527 P78527 747 757 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.049009 84.568 By MS/MS 2.5 1.12 1 1 1 1 4 2397100 2397100 0 1903 1197 1966 4821;4822;4823;4824 3489;3490 3490 1 105220 0 AYVSTLMGVPGR LTVDTSLQNGRMSIKAYVSTLMGVPGRTMG SIKAYVSTLMGVPGRTMGVMFTPLTVKYAY K A Y G R T 1 1 0 0 0 0 0 2 0 0 1 0 1 0 1 1 1 0 1 2 0 0 12 0 1249.6489 O00303 O00303 215 226 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.0015463 119.75 By MS/MS By matching 6.5 0.5 2 2 3 1 15528000 15503000 24985 1904 88 1967;1968 4825;4826;4827;4828 3491;3492;3493 3492 50 3 247020 76628 AYYQLAK ILGVPRNASQKEIKKAYYQLAKKYHPDTNK ASQKEIKKAYYQLAKKYHPDTNKDDPKAKE K A Y A K K 2 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 7 0 855.44905 Q96EY1 Q96EY1 112 118 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.012813 146.21 By MS/MS 8 0.816 1 1 1 3 10782000 10782000 0 1905 2169 1969 4829;4830;4831 3494 3494 1 387810 0 CAEALVPLLSNVNVSDR WQTPLHIAAANKAVKCAEALVPLLSNVNVS EALVPLLSNVNVSDRAGRTALHHAAFSGHG K C A D R A 2 1 2 1 1 0 1 0 0 0 3 0 0 0 1 2 0 0 0 3 0 0 17 0 1855.9462 O15084 O15084 122 138 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.013538 83.087 By MS/MS 4 0 1 1 194930 194930 0 1906 147 1970 4832 3495 3495 1 5321.4 0 CAEVVSGK CWKYTAESSDTLCPRCAEVVSGK_______ SDTLCPRCAEVVSGK_______________ R C A G K - 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 2 0 0 8 0 848.4062 Q9NSE4 Q9NSE4 1005 1012 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.017402 110.12 By MS/MS 4.5 0.5 1 1 2 1956400 1956400 0 1907 2624 1971 4833;4834 3496 3496 1 58178 0 CAIKVEQSAER VDVDFVRKAVRAIGRCAIKVEQSAERCVST AIGRCAIKVEQSAERCVSTLLDLIQTKVNY R C A E R C 2 1 0 0 1 1 2 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 11 1 1289.6398 P63010;Q10567 Q10567 380 390 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 3 0.0015561 106.67 By MS/MS By matching 3.5 0.5 1 1 1 1 640060 619100 20958 1908 1300;1167 1972 4835;4836 3497 3497 1 16901 30037 CALDFFR KDPRRCLEEGKLVNKCALDFFRQIKRHCAE EEGKLVNKCALDFFRQIKRHCAEPFTEYWT K C A F R Q 1 1 0 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 7 0 927.42727 P51970 P51970 66 72 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2 0.036682 110.34 By MS/MS 9.5 0.5 1 1 2 682760 682760 0 1909 980 1973 4837;4838 3498 3498 1 501880 0 CALGVFR CVNYVPEPENSALLRCALGVFRKFSRFPEA PENSALLRCALGVFRKFSRFPEALRLALML R C A F R K 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 821.42179 Q13200 Q13200 251 257 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.030416 114.67 By MS/MS 4.5 0.5 1 1 2 1749100 1749100 0 1910 1347 1974 4839;4840 3499 3499 1 49426 0 CAMTALSSK VKKADKVEQRKLLEKCAMTALSSKLISQQK RKLLEKCAMTALSSKLISQQKAFFAKMVVD K C A S K L 2 0 0 0 1 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 9 0 967.44669 Q99832 Q99832 158 166 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00035033 153.08 By MS/MS 6.5 0.5 1 1 2 3425500 3425500 0 1911 2295 1975 4841;4842 3500 3500 1438 1 27657 0 CAQETAWDFALPK PKDMGFTRLMQAMWKCAQETAWDFALPKQ_ WKCAQETAWDFALPKQ______________ K C A P K Q 3 0 0 1 1 1 1 0 0 0 1 1 0 1 1 0 1 1 0 0 0 0 13 0 1535.7079 Q9BPX6 Q9BPX6 463 475 MICU1 Calcium uptake protein 1, mitochondrial yes yes 2 0.00024676 146.36 By MS/MS 7 0 1 1 264850 264850 0 1912 2303 1976 4843 3501 3501 1 4732.8 0 CAQIEAK VVKRRVNALKNLQVKCAQIEAKFYEEVHDL ALKNLQVKCAQIEAKFYEEVHDLERKYAVL K C A A K F 2 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 7 0 818.39564 P55209 P55209 88 94 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2 0.027181 116.9 By MS/MS 6 0 1 1 1659800 1659800 0 1913 1030 1977 4844 3502 3502 1 12944 0 CAVVDVPFGGAK SVDEVKALASLMTYKCAVVDVPFGGAKAGV TYKCAVVDVPFGGAKAGVKINPKNYTDNEL K C A A K A 2 0 0 1 1 0 0 2 0 0 0 1 0 1 1 0 0 0 0 3 0 0 12 0 1218.6067 P00367;P49448 P00367 172 183 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.0032491 114.84 By MS/MS By matching 6 0 2 1 1 5611600 5595900 15706 1914 425 1978 4845;4846 3503 3503 1 43637 48170 CCLTYCFNKPEDK GVFMASHFDRHYCGKCCLTYCFNKPEDK__ GKCCLTYCFNKPEDK_______________ K C C D K - 0 0 1 1 3 0 1 0 0 0 1 2 0 1 1 0 1 0 1 0 0 0 13 1 1733.7211 P62979 P62979 144 156 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 3 0.00098818 118.87 By MS/MS 10 0 1 1 840340 840340 0 1915 1165 1979 4847 3504 3504 1 893200 0 CCNAQCGHR LQTRSADEPMTTFYKCCNAQCGHRWRD___ MTTFYKCCNAQCGHRWRD____________ K C C H R W 1 1 1 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1161.4226 Q9Y2Y1 Q9Y2Y1 97 105 POLR3K DNA-directed RNA polymerase III subunit RPC10 yes yes 2 0.052143 81.191 By MS/MS 10 0 1 1 12734 12734 0 1916 2906 1980 4848 3505 3505 1 13535 0 CCNVSSR AELGKLYSVVSQLIRCCNVSSRMQSSINGN SVVSQLIRCCNVSSRMQSSINGNPPLPNPF R C C S R M 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 7 0 881.34837 Q93008 Q93008 2238 2244 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.027209 116.88 By MS/MS 1.5 0.5 1 1 2 529740 529740 0 1917 2096 1981 4849;4850 3506 3506 1 26277 0 CCSGAIIVLTK PTEATAVGAVEASFKCCSGAIIVLTKSGRS ASFKCCSGAIIVLTKSGRSAHQVARYRPRA K C C T K S 1 0 0 0 2 0 0 1 0 2 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1220.6257 P14618 P14618 423 433 PKM Pyruvate kinase PKM yes yes 2 0.0017056 145.99 By MS/MS 3.5 2.5 1 1 2 3915200 3915200 0 1918 588 1982 4851;4852 3507;3508 3508 2 40569 0 CDENILWLDYK GATLKITLDNAYMEKCDENILWLDYKNICK YMEKCDENILWLDYKNICKVVEVGSKIYVD K C D Y K N 0 0 1 2 1 0 1 0 0 1 2 1 0 0 0 0 0 1 1 0 0 0 11 0 1467.6704 P14618 P14618 152 162 PKM Pyruvate kinase PKM yes yes 2 2.7542E-16 225.93 By MS/MS 6 0 1 1 2939700 2939700 0 1919 588 1983 4853 3509 3509 1 22924 0 CDFTEDQTAEFK ______________________________ ______________________________ M C D F K E 1 0 0 2 1 1 2 0 0 0 0 1 0 2 0 0 2 0 0 0 0 0 12 0 1489.6031 P60660 P60660 2 13 MYL6 Myosin light polypeptide 6 yes yes 2 0.00046527 125.74 By MS/MS 10 0 1 1 332910 332910 0 1920 1071 1984 4854 3510 3510 0 353850 0 CDFTGTLIVVPDVSK ILRAEAVESAQAGDKCDFTGTLIVVPDVSK CDFTGTLIVVPDVSKLSTPGARAETNSRVS K C D S K L 0 0 0 2 1 0 0 1 0 1 1 1 0 1 1 1 2 0 0 3 0 0 15 0 1649.8335 Q14566 Q14566 242 256 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0047944 105.17 By MS/MS 4 0 1 1 216900 216900 0 1921 1436 1985 4855 3511 3511 1 5921.1 0 CDIEEATNQLLDVNLHENQK ______________________________ ATNQLLDVNLHENQKSVQVTESDLGSESEL M C D Q K S 1 0 3 2 1 2 3 0 1 1 3 1 0 0 0 0 1 0 0 1 0 0 20 0 2382.1122 Q9BV44 Q9BV44 2 21 THUMPD3 THUMP domain-containing protein 3 yes yes 3 0.031904 50.957 By MS/MS 6 0 1 1 582080 582080 0 1922 2371 1986 4856 3512 3512 1 4539 0 CDPAGYYCGFK ILIGIDEEQGPQVYKCDPAGYYCGFKATAA QVYKCDPAGYYCGFKATAAGVKQTESTSFL K C D F K A 1 0 0 1 2 0 0 2 0 0 0 1 0 1 1 0 0 0 2 0 0 0 11 0 1336.5216 P60900 P60900 154 164 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.044176 78.264 By MS/MS 8.5 0.5 1 1 2 1121000 1121000 0 1923 1077 1987 4857;4858 3513 3513 1 160880 0 CDQGQADPVVAVAR AAASLIRLVPKLFYKCDQGQADPVVAVARD KCDQGQADPVVAVARDQSSVYLKLLMHETQ K C D A R D 3 1 0 2 1 2 0 1 0 0 0 0 0 0 1 0 0 0 0 3 0 0 14 0 1484.7042 P42858 P42858 942 955 HTT Huntingtin yes yes 2 5.8086E-12 198.55 By MS/MS 1.5 0.5 1 1 2 619600 619600 0 1924 858 1988 4859;4860 3514 3514 1 30524 0 CDSWWAK QGLKLATTILQHWKKCDSWWAKDSPLETKM TILQHWKKCDSWWAKDSPLETKMAVLALLA K C D A K D 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 7 0 951.39089 P78527 P78527 1629 1635 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.019236 128.48 By MS/MS 1 0 1 1 253000 253000 0 1925 1197 1989 4861 3515 3515 1 12361 0 CDVIAQGIVMAVK KVLAILVNIFGGIMRCDVIAQGIVMAVKDL MRCDVIAQGIVMAVKDLEIKIPVVVRLQGT R C D V K D 2 0 0 1 1 1 0 1 0 2 0 1 1 0 0 0 0 0 0 3 0 0 13 0 1402.7312 Q9P2R7 Q9P2R7 384 396 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 5.7679E-05 156.01 By MS/MS 7 0 2 2 1070200 1070200 0 1926 2741 1990;1991 4862;4863 3516;3517 3516 1599 2 19125 0 CDVSFLQSEDGSGK FAKVMHETVKDLAPKCDVSFLQSEDGSGKG KCDVSFLQSEDGSGKGAALITAVACRIREA K C D G K G 0 0 0 2 1 1 1 2 0 0 1 1 0 1 0 3 0 0 0 1 0 0 14 0 1527.6511 P52789 P52789 886 899 HK2 Hexokinase-2 yes yes 2 3.6931E-12 204.32 By MS/MS 4 0 1 1 1915100 1915100 0 1927 992 1992 4864 3518 3518 1 52280 0 CEFAVGYQR MNGRLHLGHTFSLSKCEFAVGYQRLKGKCC TFSLSKCEFAVGYQRLKGKCCLFPFGLHCT K C E Q R L 1 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 9 0 1128.5022 Q9P2J5 Q9P2J5 70 78 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0023157 126.41 By MS/MS 3 0 1 1 1982400 1982400 0 1928 2738 1993 4865 3519 3519 1 51752 0 CEFQDAYVLLSEK GYISPYFINTSKGQKCEFQDAYVLLSEKKI QKCEFQDAYVLLSEKKISSIQSIVPALEIA K C E E K K 1 0 0 1 1 1 2 0 0 0 2 1 0 1 0 1 0 0 1 1 0 0 13 0 1600.7443 P10809 P10809 237 249 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 6.2197E-59 299.42 By MS/MS By MS/MS 5.75 1.3 1 1 2 5 2 1 11 1 202640000 202610000 36525 1929 544 1994 4866;4867;4868;4869;4870;4871;4872;4873;4874;4875;4876;4877 3520;3521;3522;3523;3524;3525;3526;3527;3528;3529;3530 3525 11 1680500 112020 CEFQDAYVLLSEKK GYISPYFINTSKGQKCEFQDAYVLLSEKKI KCEFQDAYVLLSEKKISSIQSIVPALEIAN K C E K K I 1 0 0 1 1 1 2 0 0 0 2 2 0 1 0 1 0 0 1 1 0 0 14 1 1728.8393 P10809 P10809 237 250 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.5013E-72 336.16 By MS/MS 5.44 1.26 1 1 2 3 2 9 225580000 225580000 0 1930 544 1995 4878;4879;4880;4881;4882;4883;4884;4885;4886 3531;3532;3533;3534;3535 3533 4 1899100 0 CEILCNVIK FQCVQHIQPPNQEQRCEILCNVIKNKLDCD PNQEQRCEILCNVIKNKLDCDINKFTDLDL R C E I K N 0 0 1 0 2 0 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1147.573 O43933 O43933 746 754 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.00086498 145.16 By MS/MS 3 0 1 1 401420 401420 0 1931 235 1996 4887 3536 3536 1 10479 0 CELLYEGPPDDEAAMGIK ITIHLPSPVTAQKYRCELLYEGPPDDEAAM LYEGPPDDEAAMGIKSCDPKGPLMMYISKM R C E I K S 2 0 0 2 1 0 3 2 0 1 2 1 1 0 2 0 0 0 1 0 0 0 18 0 2006.8965 P13639 P13639 369 386 EEF2 Elongation factor 2 yes yes 2 2.5872E-25 223.36 By MS/MS 4.5 0.957 1 2 2 1 6 9875300 9875300 0 1932 576 1997;1998 4888;4889;4890;4891;4892;4893 3537;3538;3539 3538 362 3 265940 0 CELNVTEDALK NAVIPQYQALFSMDKCELNVTEDALKAIAR SMDKCELNVTEDALKAIARLALERKTGARG K C E L K A 1 0 1 1 1 0 2 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 11 0 1290.6126 O76031 O76031 538 548 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00040249 146.71 By MS/MS 5 0 1 1 1102300 1102300 0 1933 344 1999 4894 3540 3540 1 45311 0 CELPVSYLEPK LIFMVPVACGLFPQKCELPVSYLEPKLQDT FPQKCELPVSYLEPKLQDTIKAKYGELEPY K C E P K L 0 0 0 0 1 0 2 0 0 0 2 1 0 0 2 1 0 0 1 1 0 0 11 0 1333.6588 Q96NB2 Q96NB2 290 300 SFXN2 Sideroflexin-2 yes yes 2 0.00025912 152.54 By MS/MS 8 0 1 1 6719600 6719600 0 1934 2231 2000 4895 3541 3541 1 443290 0 CEMEQQNQEYK QEMIGSVEEQLAQLRCEMEQQNQEYKILLD AQLRCEMEQQNQEYKILLDVKTRLEQEIAT R C E Y K I 0 0 1 0 1 3 3 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 11 0 1485.5864 CON__P02533;P02533;CON__Q61782;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 389 399 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 2 0.017749 83.998 By MS/MS 6 0.816 1 1 1 3 38297 0 38297 + 1935 35;54 2001 4896;4897;4898 3542 3542 14 1 0 127600 CESAPGCGVWQRPVIDNPNYK DMDGEWEAPQIANPRCESAPGCGVWQRPVI CGVWQRPVIDNPNYKGKWKPPMIDNPSYQG R C E Y K G 1 1 2 1 2 1 1 2 0 1 0 1 0 0 3 1 0 1 1 2 0 0 21 1 2446.1158 P27824 P27824 360 380 CANX Calnexin yes yes 3 0.00060882 90.654 By MS/MS 5 0.816 1 1 1 3 2722100 2722100 0 1936 711 2002 4899;4900;4901 3543 3543 1 52451 0 CESGFIEELPEETR SVEIVPRLPDYICPRCESGFIEELPEETRS RCESGFIEELPEETRSTENGSAPSTAPTDQ R C E T R S 0 1 0 0 1 0 5 1 0 1 1 0 0 1 1 1 1 0 0 0 0 0 14 0 1694.7458 Q9BV68 Q9BV68 32 45 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 2 6.5412E-08 182.71 By MS/MS 7.5 0.5 1 1 2 2270200 2270200 0 1937 2372 2003 4902;4903 3544 3544 1 47398 0 CESLLGLDPATCSR QPDQPNYGFPLDLLRCESLLGLDPATCSRV RCESLLGLDPATCSRVLNKNYTLLVSMAPL R C E S R V 1 1 0 1 2 0 1 1 0 0 3 0 0 0 1 2 1 0 0 0 0 0 14 0 1577.7178 Q658Y4 Q658Y4 479 492 FAM91A1 Protein FAM91A1 yes yes 2 0.0028651 142.89 By MS/MS 4 0 1 1 782370 782370 0 1938 1668 2004 4904 3545 3545 0 21358 0 CEVLQYSAR ENAYKKTFLPEMSEKCEVLQYSAREAQDSK PEMSEKCEVLQYSAREAQDSKKVVEDIEYL K C E A R E 1 1 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1124.5284 O95299 O95299 253 261 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.00083166 145.9 By MS/MS 7 0 1 1 1405400 1405400 0 1939 384 2005 4905 3546 3546 1 25115 0 CEVTSGTLR INTDDNLEPELKDYKCEVTSGTLRIGAVSA ELKDYKCEVTSGTLRIGAVSAPIYNAHEKM K C E L R I 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 9 0 1021.4862 A3KMH1 A3KMH1 724 732 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.029991 91.087 By MS/MS 2 0 1 1 333630 333630 0 1940 13 2006 4906 3547 3547 1 16583 0 CFGGLQK ______________________________ LKQISSNKCFGGLQKVFEHDSVELNCKMKF K C F Q K V 0 0 0 0 1 1 0 2 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 808.39016 P10768 P10768 11 17 ESD S-formylglutathione hydrolase yes yes 2 0.043799 105.42 By MS/MS 8.5 0.5 1 1 2 1188800 1188800 0 1941 543 2007 4907;4908 3548 3548 1 134340 0 CFGTGAAGNR FLESIAMHDIIAAEKCFGTGAAGNRTSPQE IAAEKCFGTGAAGNRTSPQEGERYNYSKCT K C F N R T 2 1 1 0 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 10 0 1009.44 P78527 P78527 1312 1321 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00010603 164.96 By MS/MS By matching 1.75 0.829 2 1 1 3 1 6225000 6174700 50337 1942 1197 2008 4909;4910;4911;4912 3549;3550;3551 3550 3 289690 50337 CFIVGADNVGSK NYFLKIIQLLDDYPKCFIVGADNVGSKQMQ YPKCFIVGADNVGSKQMQQIRMSLRGKVVV K C F S K Q 1 0 1 1 1 0 0 2 0 1 0 1 0 1 0 1 0 0 0 2 0 0 12 0 1265.6074 Q8NHW5;P05388 Q8NHW5 27 38 RPLP0P6;RPLP0 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 0.017039 89.171 By MS/MS 7.5 0.5 1 1 2 1394700 1394700 0 1943 473 2009 4913;4914 3552 3552 1 79486 0 CFSPGVIEVQEVQGK LLEPVEGEAAEELSRCFSPGVIEVQEVQGK CFSPGVIEVQEVQGKKVARVANPRLDTFSR R C F G K K 0 0 0 0 1 2 2 2 0 1 0 1 0 1 1 1 0 0 0 3 0 0 15 0 1675.824 O15160 O15160 256 270 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 6.4327E-08 174.72 By MS/MS 7 0 1 1 2430100 2430100 0 1944 155 2010 4915 3553 3553 1 43426 0 CGAALAGHQLIR CSLLRLQETLSAADRCGAALAGHQLIRGLG ADRCGAALAGHQLIRGLGQECVLSSSPAVL R C G I R G 3 1 0 0 1 1 0 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1265.6663 P78527 P78527 25 36 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 7.2834E-05 161.02 By MS/MS 1.8 0.748 2 2 1 5 2564800 2564800 0 1945 1197 2011 4916;4917;4918;4919;4920 3554;3555;3556 3555 3 117250 0 CGDCPSADPTVK DLAVLDASNQISVYKCGDCPSADPTVKLGA VYKCGDCPSADPTVKLGAVGGSGFKVCLRT K C G V K L 1 0 0 2 2 0 0 1 0 0 0 1 0 0 2 1 1 0 0 1 0 0 12 0 1305.5329 O95163 O95163 453 464 IKBKAP Elongator complex protein 1 yes yes 2 3.2006E-05 169.93 By MS/MS 2 0.816 1 1 1 3 620770 620770 0 1946 368 2012 4921;4922;4923 3557;3558 3557 2 23322 0 CGDLLAASQVVNR VEGHPVWALIYYCMRCGDLLAASQVVNRAQ MRCGDLLAASQVVNRAQHQLGEFKTWFQEY R C G N R A 2 1 1 1 1 1 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 13 0 1401.7034 Q8N1F7 Q8N1F7 328 340 NUP93 Nuclear pore complex protein Nup93 yes yes 2 1.2928E-58 289.67 By MS/MS 4.5 0.5 1 1 2 1897100 1897100 0 1947 1898 2013 4924;4925 3559;3560 3560 2 70245 0 CGDSVYAAEK SKFAQKYGGAEKCSRCGDSVYAAEKIIGAG EKCSRCGDSVYAAEKIIGAGKPWHKNCFRC R C G E K I 2 0 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 10 0 1098.4652 Q16527 Q16527 122 131 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 9.5893E-07 183.43 By MS/MS 9 0 1 1 440720 440720 0 1948 1536 2014 4926 3561 3561 1 252930 0 CGEAALNDPK LETHIHNQGLAAIEKCGEAALNDPKMYVQT AAIEKCGEAALNDPKMYVQTVLDVHKKYNA K C G P K M 2 0 1 1 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 10 0 1073.4812 Q13616 Q13616 355 364 CUL1 Cullin-1 yes yes 2 0.0066493 102.06 By MS/MS 4.5 0.5 1 1 2 845450 845450 0 1949 1387 2015 4927;4928 3562 3562 1 28795 0 CGEALGLK ITDLKQKVENLFNEKCGEALGLKQAVKVPF ENLFNEKCGEALGLKQAVKVPFALFESFPE K C G L K Q 1 0 0 0 1 0 1 2 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 846.42694 P78347 P78347 745 752 GTF2I General transcription factor II-I yes yes 2 0.0068936 130.04 By MS/MS 3.5 0.5 1 1 2 1094800 1094800 0 1950 1194 2016 4929;4930 3563 3563 1 28781 0 CGEEIAVQFVDMVK SCPHLGASTKEAQSRCGEEIAVQFVDMVKG RCGEEIAVQFVDMVKGKSLTGVVNAQALTS R C G V K G 1 0 0 1 1 1 2 1 0 1 0 1 1 1 0 0 0 0 0 3 0 0 14 0 1623.7637 O43175 O43175 295 308 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 3.7829E-08 188.15 By MS/MS 6 0 1 1 2374400 2374400 0 1951 185 2017 4931 3564 3564 1 18516 0 CGESGHLAK GFQFVSSSLPDICYRCGESGHLAKDCDLQE PDICYRCGESGHLAKDCDLQEDACYNCGRG R C G A K D 1 0 0 0 1 0 1 2 1 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 957.43381 P62633 P62633 57 65 CNBP Cellular nucleic acid-binding protein yes yes 2;3 0.0006469 150.05 By MS/MS 9.5 0.5 2 2 4 1109600 1109600 0 1952 1138 2018 4932;4933;4934;4935 3565;3566;3567 3567 3 822650 0 CGESGHLAR VAINCSKTSEVNCYRCGESGHLARECTIEA EVNCYRCGESGHLARECTIEATA_______ R C G A R E 1 1 0 0 1 0 1 2 1 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 985.43996 P62633 P62633 161 169 CNBP Cellular nucleic acid-binding protein yes yes 2;3 0.0026132 131.06 By MS/MS By matching 9.4 0.49 3 2 4 1 5562700 5549900 12794 1953 1138 2019 4936;4937;4938;4939;4940 3568;3569;3570 3568 3 3613200 137880 CGETGHVAINCSK FGHIQKDCTKVKCYRCGETGHVAINCSKTS YRCGETGHVAINCSKTSEVNCYRCGESGHL R C G S K T 1 0 1 0 2 0 1 2 1 1 0 1 0 0 0 1 1 0 0 1 0 0 13 0 1431.6235 P62633 P62633 140 152 CNBP Cellular nucleic acid-binding protein yes yes 2 1.644E-17 217.22 By MS/MS 9 0 1 1 577790 577790 0 1954 1138 2020 4941 3571 3571 1 331600 0 CGFAGETGPR EKTAVVIDLGEAFTKCGFAGETGPRCIIPS EAFTKCGFAGETGPRCIIPSVIKRAGMPKP K C G P R C 1 1 0 0 1 0 1 3 0 0 0 0 0 1 1 0 1 0 0 0 0 0 10 0 1050.4553 Q9NZ32 Q9NZ32 27 36 ACTR10 Actin-related protein 10 yes yes 2 0.015485 95.502 By MS/MS 7 0 1 1 656780 656780 0 1955 2704 2021 4942 3572 3572 1 11737 0 CGFSELYSWQR LGRQQPDTELEIQQKCGFSELYSWQRERKV IQQKCGFSELYSWQRERKVKTEFCLHDGPP K C G Q R E 0 1 0 0 1 1 1 1 0 0 1 0 0 1 0 2 0 1 1 0 0 0 11 0 1431.6241 Q9NSE4 Q9NSE4 91 101 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 3.8154E-07 188.87 By MS/MS 4 0 1 1 770380 770380 0 1956 2624 2022 4943 3573 3573 1 21030 0 CGLALALNK GRVISESPPDQWEARCGLALALNKLSQYLD DQWEARCGLALALNKLSQYLDSSQVKPLFQ R C G N K L 2 0 1 0 1 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 958.52699 Q92616 Q92616 1235 1243 GCN1L1 Translational activator GCN1 yes yes 2 0.001438 135.87 By MS/MS 2.5 0.5 1 1 2 1513300 1513300 0 1957 2068 2023 4944;4945 3574 3574 1 60825 0 CGLDNTK GPSVYLERLKILRQRCGLDNTKQDDRPPLT RLKILRQRCGLDNTKQDDRPPLTSLLSKPA R C G T K Q 0 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 806.35925 Q14008 Q14008 1946 1952 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.021547 122.13 By MS/MS 2 0 1 1 389110 389110 0 1958 1405 2024 4946 3575 3575 1 19341 0 CGLLLDR TEDGTAVASVGKGQRCGLLLDRTNFYAEQG ASVGKGQRCGLLLDRTNFYAEQGGQASDRG R C G D R T 0 1 0 1 1 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 845.44292 Q5JTZ9 Q5JTZ9 555 561 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.043839 105.39 By MS/MS 4 0 1 1 2589200 2589200 0 1959 1611 2025 4947 3576 3576 1 70682 0 CGPITSTTR NPDDLREEIVKAGLKCGPITSTTRFIFEKK VKAGLKCGPITSTTRFIFEKKLAQALLEQG K C G T R F 0 1 0 0 1 0 0 1 0 1 0 0 0 0 1 1 3 0 0 0 0 0 9 0 991.47568 Q86XL3 Q86XL3 91 99 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.018406 97.635 By MS/MS 4 0 1 1 912220 912220 0 1960 1841 2026 4948 3577 3577 1 24902 0 CGPMVLDALIK GDKPHMQTYEVDLNKCGPMVLDALIKIKNE DLNKCGPMVLDALIKIKNEVDSTLTFRRSC K C G I K I 1 0 0 1 1 0 0 1 0 1 2 1 1 0 1 0 0 0 0 1 0 0 11 0 1215.6356 P21912 P21912 68 78 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.013078 90.15 By MS/MS 8 0 1 1 529320 529320 0 1961 651 2027 4949 3578 3578 439 1 34919 0 CGSVLVR KIGKPHTVPCKVTGRCGSVLVRLIPAPRGT VPCKVTGRCGSVLVRLIPAPRGTGIVSAPV R C G V R L 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 789.41671 P15880 P15880 188 194 RPS2 40S ribosomal protein S2 yes yes 2 0.024601 118.69 By MS/MS 8.5 0.5 1 1 2 5623800 5623800 0 1962 602 2028 4950;4951 3579 3579 1 425180 0 CGTGIVGVFVK AASIGNAQKLPMCDKCGTGIVGVFVKLRDR MCDKCGTGIVGVFVKLRDRHRHPECYVCTD K C G V K L 0 0 0 0 1 0 0 3 0 1 0 1 0 1 0 0 1 0 0 3 0 0 11 0 1135.606 O00151 O00151 263 273 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.0018998 150.36 By MS/MS 7.5 0.5 1 1 2 1123500 1123500 0 1963 71 2029 4952;4953 3580;3581 3581 2 48494 0 CGVCEVCQQPECGK KDDREDKENAFKRRRCGVCEVCQQPECGKC RCGVCEVCQQPECGKCKACKDMVKFGGSGR R C G G K C 0 0 0 0 4 2 2 2 0 0 0 1 0 0 1 0 0 0 0 2 0 0 14 0 1709.663 P26358 P26358 653 666 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.00054539 146.71 By MS/MS 2 0 1 1 167630 167630 0 1964 693 2030 4954 3582 3582 1 8331.9 0 CGVPFTDLLDAAK LEREFQRVTISGEEKCGVPFTDLLDAAKSV EKCGVPFTDLLDAAKSVVRALFIREKYMAL K C G A K S 2 0 0 2 1 0 0 1 0 0 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1405.6912 Q01433 Q01433 230 242 AMPD2 AMP deaminase 2 yes yes 2 0.0047486 104.79 By MS/MS 4 0 1 1 242460 242460 0 1965 1241 2031 4955 3583 3583 1 6618.8 0 CIAVGESDGSIWNPDGIDPK VGLHSMRYLHRFGAKCIAVGESDGSIWNPD ESDGSIWNPDGIDPKELEDFKLQHGSILGF K C I P K E 1 0 1 3 1 0 1 3 0 3 0 1 0 0 2 2 0 1 0 1 0 0 20 0 2128.9735 P00367;P49448 P00367 327 346 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 3.5212E-31 219.52 By MS/MS 6 0 1 1 2791100 2791100 0 1966 425 2032 4956 3584 3584 1 21765 0 CIDHYTK NVNDNSEYVETIIAKCIDHYTKQCVENADL YVETIIAKCIDHYTKQCVENADLPEGEKKP K C I T K Q 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 7 0 935.4171 Q99460 Q99460 104 110 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 0.021324 130.04 By MS/MS 4 0 2 2 1550400 1550400 0 1967 2268 2033 4957;4958 3585;3586 3586 2 42323 0 CIDLEPDNATTYVHK TDQQQFGKADEMYDKCIDLEPDNATTYVHK CIDLEPDNATTYVHKGLLQLQWKQDLDRGL K C I H K G 1 0 1 2 1 0 1 0 1 1 1 1 0 0 1 0 2 0 1 1 0 0 15 0 1774.8196 O94826 O94826 502 516 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3 0.00017891 129.17 By MS/MS 5 0 1 1 1836800 1836800 0 1968 353 2034 4959 3587 3587 1 75499 0 CIECNQEAK VAATPTAASASCQYRCIECNQEAKELYRDY ASCQYRCIECNQEAKELYRDYNHGVLKITI R C I A K E 1 0 1 0 2 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 9 0 1150.4747 Q9H2C2 Q9H2C2 34 42 ARV1 Protein ARV1 yes yes 2 1.0469E-05 176.44 By MS/MS 1.5 0.5 1 1 2 318740 318740 0 1969 2474 2035 4960;4961 3588 3588 1 15639 0 CIELCCGSVK KRAVAGDASESALLKCIELCCGSVKEMRER SALLKCIELCCGSVKEMRERYAKIVEIPFN K C I V K E 0 0 0 0 3 0 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1224.5301 P05023 P05023 459 468 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 9.6219E-05 166.07 By MS/MS 3 1.41 1 1 1 1 1 5 7020100 7020100 0 1970 463 2036 4962;4963;4964;4965;4966 3589;3590;3591;3592 3589 4 271260 0 CIELCCGSVKEMR KRAVAGDASESALLKCIELCCGSVKEMRER LKCIELCCGSVKEMRERYAKIVEIPFNSTN K C I M R E 0 1 0 0 3 0 2 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 13 1 1640.7143 P05023 P05023 459 471 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.051194 58.511 By MS/MS 3 1.41 1 1 1 1 1 5 1745000 1745000 0 1971 463 2037 4967;4968;4969;4970;4971 3593 3593 1 68922 0 CIEPELNNLIALGDK SEKDMIRQMMIKIFRCIEPELNNLIALGDK CIEPELNNLIALGDKIDSFNSLYMLVKMSH R C I D K I 1 0 2 1 1 0 2 1 0 2 3 1 0 0 1 0 0 0 0 0 0 0 15 0 1697.8658 Q9NV70 Q9NV70 589 603 EXOC1 Exocyst complex component 1 yes yes 2 0.029364 89.301 By MS/MS 4 0 1 1 0 0 0 1972 2645 2038 4972 3594 3594 1 0 0 CIGENFAYVQIK GEKFAYVPFGAGRHRCIGENFAYVQIKTIW RHRCIGENFAYVQIKTIWSTMLRLYEFDLI R C I I K T 1 0 1 0 1 1 1 1 0 2 0 1 0 1 0 0 0 0 1 1 0 0 12 0 1440.7071 Q16850 Q16850 449 460 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 6.801E-17 227.88 By MS/MS 5.5 0.5 1 1 2 2133200 2133200 0 1973 1551 2039 4973;4974 3595 3595 1 18624 0 CIGKPGGSLDNSEQK AQELLQRMTDKCFRKCIGKPGGSLDNSEQK CIGKPGGSLDNSEQKCIAMCMDRYMDAWNT K C I Q K C 0 0 1 1 1 1 1 3 0 1 1 2 0 0 1 2 0 0 0 0 0 0 15 1 1588.7515 Q9Y5L4 Q9Y5L4 50 64 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 3 0.00669 85.287 By MS/MS 10 0 1 1 865640 865640 0 1974 2975 2040 4975 3596 3596 1 920080 0 CIINNTHR LTDEAVSGWKFEIHRCIINNTHRLVELCVA WKFEIHRCIINNTHRLVELCVAKLSQDWFP R C I H R L 0 1 2 0 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 8 0 1026.5029 Q93008;O00507 Q93008 147 154 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.038372 95.909 By MS/MS 2 0 1 1 197660 197660 0 1975 2096 2041 4976 3597 3597 1 9824.8 0 CILPFDK SQLKEHFAQFGHVRRCILPFDKETGFHRGL AQFGHVRRCILPFDKETGFHRGLGWVQFSS R C I D K E 0 0 0 1 1 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 7 0 891.45242 Q9GZT3 Q9GZT3 48 54 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.021238 122.98 By MS/MS 10 0 1 1 1394900 1394900 0 1976 2443 2042 4977 3598 3598 1 1482600 0 CILPFDKETGFHR SQLKEHFAQFGHVRRCILPFDKETGFHRGL RRCILPFDKETGFHRGLGWVQFSSEEGLRN R C I H R G 0 1 0 1 1 0 1 1 1 1 1 1 0 2 1 0 1 0 0 0 0 0 13 1 1618.7926 Q9GZT3 Q9GZT3 48 60 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 3 0.025788 69.846 By MS/MS 10 0 1 1 455830 455830 0 1977 2443 2043 4978 3599 3599 1 484500 0 CILVASPGFVR VVQAIQRHIHFDVVKCILVASPGFVREQFC DVVKCILVASPGFVREQFCDYLFQQAVKTD K C I V R E 1 1 0 0 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 2 0 0 11 0 1217.6591 Q9BRX2 Q9BRX2 204 214 PELO Protein pelota homolog yes yes 2 0.0011814 131.22 By MS/MS 7 0 1 1 804230 804230 0 1978 2331 2044 4979 3600 3600 1 14372 0 CIPALDSLTPANEDQK VEEGIVLGGGCALLRCIPALDSLTPANEDQ IPALDSLTPANEDQKIGIEIIKRTLKIPAM R C I Q K I 2 0 1 2 1 1 1 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 16 0 1770.8458 P10809 P10809 447 462 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 1.6794E-14 241.35 By MS/MS By MS/MS 6.36 1.97 1 1 1 4 1 1 1 1 10 1 102650000 102540000 113110 1979 544 2045 4980;4981;4982;4983;4984;4985;4986;4987;4988;4989;4990 3601;3602;3603;3604;3605;3606;3607;3608;3609;3610 3602 10 1192800 346900 CIPALDSLTPANEDQKIGIEIIK VEEGIVLGGGCALLRCIPALDSLTPANEDQ TPANEDQKIGIEIIKRTLKIPAMTIAKNAG R C I I K R 2 0 1 2 1 1 2 1 0 5 2 2 0 0 2 1 1 0 0 0 0 0 23 1 2537.3411 P10809 P10809 447 469 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.025747 49.559 By MS/MS 6 0 1 1 3434800 3434800 0 1980 544 2046 4991 3611 3611 1 26784 0 CIQCGQYLDDPDLK ARAKTVMNSKTHPPKCIQCGQYLDDPDLKY KCIQCGQYLDDPDLKYGQHPPDAVDEPQML K C I L K Y 0 0 0 3 2 2 0 1 0 1 2 1 0 0 1 0 0 0 1 0 0 0 14 0 1723.7546 P26358 P26358 353 366 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 6.8865E-09 194.24 By MS/MS 2.5 0.5 1 1 2 569430 569430 0 1981 693 2047 4992;4993 3612 3612 1 20641 0 CISIALK ______________________________ SNKDEAERCISIALKAIQSNQPDRALRFLE R C I L K A 1 0 0 0 1 0 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 7 0 803.45751 Q9NXW2 Q9NXW2 11 17 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.044114 105.2 By MS/MS 7 0 1 1 1176800 1176800 0 1982 2694 2048 4994 3613 3613 1 21030 0 CITDTLQELVNQSK IVGLQAFQERLNSYKCITDTLQELVNQSKA KCITDTLQELVNQSKAAPQSPSVPKKPGPP K C I S K A 0 0 1 1 1 2 1 0 0 1 2 1 0 0 0 1 2 0 0 1 0 0 14 0 1647.8138 O75694 O75694 974 987 NUP155 Nuclear pore complex protein Nup155 yes yes 2 7.115E-08 215.53 By MS/MS 3.5 0.5 1 1 2 240430 240430 0 1983 324 2049 4995;4996 3614 3614 1 6354.7 0 CIYNLLQSSSPAVK KVCHANPSERARFIRCIYNLLQSSSPAVKY RCIYNLLQSSSPAVKYEAAGTLVTLSSAPT R C I V K Y 1 0 1 0 1 1 0 0 0 1 2 1 0 0 1 3 0 0 1 1 0 0 14 0 1578.8076 P53618 P53618 248 261 COPB1 Coatomer subunit beta yes yes 2 1.74E-25 234.17 By MS/MS 3.5 0.5 1 1 2 1722300 1722300 0 1984 1004 2050 4997;4998 3615 3615 1 46852 0 CKDISSALR CQVVRLDDCGLTEARCKDISSALRVNPALA GLTEARCKDISSALRVNPALAELNLRSNEL R C K L R V 1 1 0 1 1 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 9 1 1048.5335 P13489 P13489 45 53 RNH1 Ribonuclease inhibitor yes yes 2 0.015754 128.38 By MS/MS 7 0 1 1 1041400 1041400 0 1985 574 2051 4999 3616 3616 1 18610 0 CKELGITALHIK SPYAAMLAAQDVAQRCKELGITALHIKLRA AQRCKELGITALHIKLRATGGNRTKTPGPG R C K I K L 1 0 0 0 1 0 1 1 1 2 2 2 0 0 0 0 1 0 0 0 0 0 12 1 1381.7752 P62263 P62263 85 96 RPS14 40S ribosomal protein S14 yes yes 3;4 0.017101 78.287 By MS/MS 10 0 2 2 784100 784100 0 1986 1122 2052 5000;5001 3617;3618 3617 2 833420 0 CKGGFAPAEK ______________________________ ATCERCKGGFAPAEKIVNSNGELYHEQCFV R C K E K I 2 0 0 0 1 0 1 2 0 0 0 2 0 1 1 0 0 0 0 0 0 0 10 1 1063.5121 P48059 P48059 13 22 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 2 0.043757 112.11 By MS/MS 8 0 1 1 538740 538740 0 1987 901 2053 5002 3619 3619 1 35541 0 CLAENAVYLCDR GQLWLCAPQAKQIWKCLAENAVYLCDREAC IWKCLAENAVYLCDREACFKWYSKLMGDEP K C L D R E 2 1 1 1 2 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 12 0 1482.6595 Q93008;O00507 Q93008 683 694 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 2.2582E-05 206.36 By MS/MS 2.5 1.12 1 1 1 1 4 2197000 2197000 0 1988 2096 2054 5003;5004;5005;5006 3620 3620 1 88324 0 CLALATHDNPLR MSVIREWGSGSDTLRCLALATHDNPLRREE TLRCLALATHDNPLRREEMHLEDSANFIKY R C L L R R 2 1 1 1 1 0 0 0 1 0 3 0 0 0 1 0 1 0 0 0 0 0 12 0 1379.698 P16615 P16615 560 571 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 3 0.049176 72.34 By MS/MS 1 0 1 1 392940 392940 0 1989 608 2055 5007 3621 3621 1 19198 0 CLAPMMSEVIR VIIVVKDGPGFYTTRCLAPMMSEVIRILQE YTTRCLAPMMSEVIRILQEGVDPKKLDSLT R C L I R I 1 1 0 0 1 0 1 0 0 1 1 0 2 0 1 1 0 0 0 1 0 0 11 0 1305.6243 P40939 P40939 550 560 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.010421 93.649 By MS/MS 5 0 1 1 554670 554670 0 1990 835 2056 5008 3622 3622 584 1 22799 0 CLATHGR VLNSLAEEKLQASVRCLATHGRFLEIGKFD EKLQASVRCLATHGRFLEIGKFDLSQNHPL R C L G R F 1 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 813.39156 P49327 P49327 1759 1765 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.013964 143.02 By MS/MS 3 1.41 1 1 1 1 1 5 6126400 6126400 0 1991 915 2057 5009;5010;5011;5012;5013 3623;3624;3625;3626 3624 4 283100 0 CLDDHKYK IDQRLEGIVNKMFQRCLDDHKYKQAIGIAL VNKMFQRCLDDHKYKQAIGIALETRRLDVF R C L Y K Q 0 0 0 2 1 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 8 1 1077.4913 Q99460 Q99460 141 148 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.028956 143.11 By MS/MS 4 0 1 1 191460 191460 0 1992 2268 2058 5014 3627 3627 1 5226.5 0 CLEDENAR ERLKQLIDKETNDRKCLEDENARLQRVQYD KETNDRKCLEDENARLQRVQYDLQKANSSA K C L A R L 1 1 1 1 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1005.4186 P15924 P15924 1499 1506 DSP Desmoplakin yes yes 2 0.0094613 120.46 By MS/MS 1.5 0.5 1 1 2 185570 185570 0 1993 603 2059 5015;5016 3628 3628 1 9201.9 0 CLEEFELLGK IRTIRNAMKIRDVTKCLEEFELLGKAYGKA RDVTKCLEEFELLGKAYGKAKSIVDKEGVP K C L G K A 0 0 0 0 1 0 3 1 0 0 3 1 0 1 0 0 0 0 0 0 0 0 10 0 1236.606 Q99613;B5ME19 Q99613 79 88 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.00020929 156.35 By MS/MS By matching 5.7 2.69 1 1 2 1 1 1 1 1 1 9 1 25350000 25302000 47460 1994 2275 2060 5017;5018;5019;5020;5021;5022;5023;5024;5025;5026 3629;3630;3631;3632;3633;3634;3635;3636 3635 8 849810 99171 CLEKEVAALCR LVIGSSTLFSALLIKCLEKEVAALCRYTPR LLIKCLEKEVAALCRYTPRRNIPPYFVALV K C L C R Y 2 1 0 0 2 0 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 11 1 1347.6639 P12956 P12956 389 399 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2;3 0.0052436 133.23 By MS/MS 5 0 2 2 1610300 1610300 0 1995 569 2061 5027;5028 3637;3638 3638 2 66189 0 CLELFSELAEDK QSKILKVIRKNIVKKCLELFSELAEDKENY VKKCLELFSELAEDKENYKKFYEAFSKNLK K C L D K E 1 0 0 1 1 0 3 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 12 0 1452.6806 P08238 P08238 412 423 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 3.0318E-11 208.15 By MS/MS 4.2 0.748 1 2 2 5 3283400 3283400 0 1996 501 2062 5029;5030;5031;5032;5033 3639;3640;3641;3642;3643;3644 3642 6 109010 0 CLELFSELAEDKENYK QSKILKVIRKNIVKKCLELFSELAEDKENY LELFSELAEDKENYKKFYEAFSKNLKLGIH K C L Y K K 1 0 1 1 1 0 4 0 0 0 3 2 0 1 0 1 0 0 1 0 0 0 16 1 1986.9245 P08238 P08238 412 427 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0064395 84.566 By MS/MS 4.5 0.5 1 1 2 673040 673040 0 1997 501 2063 5034;5035 3645 3645 1 20701 0 CLELFTELAEDK QSKILKVIRKNLVKKCLELFTELAEDKENY VKKCLELFTELAEDKENYKKFYEQFSKNIK K C L D K E 1 0 0 1 1 0 3 0 0 0 3 1 0 1 0 0 1 0 0 0 0 0 12 0 1466.6963 P07900 P07900 420 431 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 8.3197E-24 238.01 By MS/MS 4.33 0.471 2 1 3 716310 716310 0 1998 494 2064 5036;5037;5038 3646;3647;3648;3649 3646 4 21133 0 CLELFTELAEDKENYK QSKILKVIRKNLVKKCLELFTELAEDKENY LELFTELAEDKENYKKFYEQFSKNIKLGIH K C L Y K K 1 0 1 1 1 0 4 0 0 0 3 2 0 1 0 0 1 0 1 0 0 0 16 1 2000.9401 P07900 P07900 420 435 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.012663 81.327 By MS/MS 4 0 1 1 267540 267540 0 1999 494 2065 5039 3650 3650 1 7303.5 0 CLELVEHFGPNELRK VGHLSEPLMNRLEDKCLELVEHFGPNELRK CLELVEHFGPNELRKVLVMLAAQSRRSVPL K C L R K V 0 1 1 0 1 0 3 1 1 0 3 1 0 1 1 0 0 0 0 1 0 0 15 1 1839.9302 Q969Z0 Q969Z0 246 260 TBRG4 Protein TBRG4 yes yes 3;4 0.0027812 91.307 By MS/MS 6 0 2 2 9703300 9703300 0 2000 2112 2066 5040;5041 3651;3652 3652 2 75667 0 CLGFSDK HRGQPLPPDLLQQAKCLGFSDKQIALAVLS PDLLQQAKCLGFSDKQIALAVLSTELAVRK K C L D K Q 0 0 0 1 1 0 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 7 0 825.36909 P27708 P27708 868 874 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.045203 104.45 By MS/MS 1.5 0.5 1 1 2 425600 425600 0 2001 709 2067 5042;5043 3653 3653 1 20998 0 CLGHPEEFYNLVR ______________________________ VKCLGHPEEFYNLVRFRIGGKRKVMPKMDQ K C L V R F 0 1 1 0 1 0 2 1 1 0 2 0 0 1 1 0 0 0 1 1 0 0 13 0 1632.7719 P37268 P37268 6 18 FDFT1 Squalene synthase yes yes 3 0.0020466 94.191 By MS/MS 7 0 1 1 1065400 1065400 0 2002 814 2068 5044 3654 3654 1 19039 0 CLHFSGVGK QLASVTDSTQVNVPRCLHFSGVGKVRQAAC QVNVPRCLHFSGVGKVRQAACGGTGCAVLN R C L G K V 0 0 0 0 1 0 0 2 1 0 1 1 0 1 0 1 0 0 0 1 0 0 9 0 1003.4909 Q96I51 Q96I51 329 337 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 3 0.021309 85.862 By MS/MS 7 0 1 1 737770 737770 0 2003 2199 2069 5045 3655 3655 1 13184 0 CLHPLANETFVAK YKNRFWHDTCFRCAKCLHPLANETFVAKDN AKCLHPLANETFVAKDNKILCNKCTTREDS K C L A K D 2 0 1 0 1 0 1 0 1 0 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1498.7602 Q13642 Q13642 71 83 FHL1 Four and a half LIM domains protein 1 yes yes 2;3 0.00079368 133.91 By MS/MS 8.75 0.829 2 1 1 4 3817400 3817400 0 2004 1394 2070 5046;5047;5048;5049 3656;3657 3656 1 363280 0 CLIATGGTPR NMVKLNDGSQITYEKCLIATGGTPRSLSAI ITYEKCLIATGGTPRSLSAIDRAGAEVKSR K C L P R S 1 1 0 0 1 0 0 2 0 1 1 0 0 0 1 0 2 0 0 0 0 0 10 0 1044.5386 O95831 O95831 256 265 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.00067206 138.06 By MS/MS 5.5 0.5 1 1 2 24949000 24949000 0 2005 409 2071 5050;5051 3658;3659 3659 2 787550 0 CLIFPLIVTGQR LPWWGAIAACTVFARCLIFPLIVTGQREAA FARCLIFPLIVTGQREAARIHNHLPEIQKF R C L Q R E 0 1 0 0 1 1 0 1 0 2 2 0 0 1 1 0 1 0 0 1 0 0 12 0 1415.7959 Q15070 Q15070 153 164 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.0046712 107.79 By MS/MS 6.5 0.5 1 1 2 459930 459930 0 2006 1477 2072 5052;5053 3660 3660 1 7231.6 0 CLLQIQASSGESK GVFTTGIMTPGERIKCLLQIQASSGESKYT IKCLLQIQASSGESKYTGTLDCAKKLYQEF K C L S K Y 1 0 0 0 1 2 1 1 0 1 2 1 0 0 0 3 0 0 0 0 0 0 13 0 1419.7028 O43772 O43772 136 148 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 6.7416E-12 252.97 By MS/MS 8.5 0.5 1 1 2 2746100 2746100 0 2007 222 2073 5054;5055 3661;3662 3661 2 308180 0 CLLVSGFDSQSER KGGRGARIVWVCDGRCLLVSGFDSQSERQL GRCLLVSGFDSQSERQLLLYEAEALAGGPL R C L E R Q 0 1 0 1 1 1 1 1 0 0 2 0 0 1 0 3 0 0 0 1 0 0 13 0 1496.6929 P57737 P57737 695 707 CORO7 Coronin-7 yes yes 2 1.6737E-07 181.31 By MS/MS 4.5 0.5 1 1 2 712190 712190 0 2008 1056 2074 5056;5057 3663 3663 1 21575 0 CLMDQATDPNILGR AQEPESGLSEETQVKCLMDQATDPNILGRT KCLMDQATDPNILGRTWEGWEPWM______ K C L G R T 1 1 1 2 1 1 0 1 0 1 2 0 1 0 1 0 1 0 0 0 0 0 14 0 1602.7494 P78527 P78527 4106 4119 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.899E-46 281.17 By MS/MS 2.5 1.12 2 2 2 2 8 3153400 3153400 0 2009 1197 2075;2076 5058;5059;5060;5061;5062;5063;5064;5065 3664;3665;3666;3667 3666 952 4 134570 0 CLNNLAASQLK MTFEEEAQLLQLKVKCLNNLAASQLKLDHY LKVKCLNNLAASQLKLDHYRAALRSCSLVL K C L L K L 2 0 2 0 1 1 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1230.6391 Q14318 Q14318 274 284 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.00037736 147.73 By MS/MS 6.5 0.5 1 1 2 16815000 16815000 0 2010 1428 2077 5066;5067 3668 3668 1 135620 0 CLQEGAEISSPAVER QCQEVLHHISMIPAKCLQEGAEISSPAVER CLQEGAEISSPAVERLISSLLRTCDLEEFQ K C L E R L 2 1 0 0 1 1 3 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 15 0 1644.7777 Q9BQ52 Q9BQ52 609 623 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 2.3289E-14 203.7 By MS/MS 4 0 1 1 1061400 1061400 0 2011 2305 2078 5068 3669 3669 1 28976 0 CLQNPSSDIR GGGQLPAKLSSLFVKCLQNPSSDIRLVAEK SLFVKCLQNPSSDIRLVAEKMIWWANKDPL K C L I R L 0 1 1 1 1 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 10 0 1188.5557 Q92616 Q92616 2558 2567 GCN1L1 Translational activator GCN1 yes yes 2 0.00048742 145.46 By MS/MS 1.5 0.5 1 1 2 1862000 1862000 0 2012 2068 2079 5069;5070 3670 3670 1 92485 0 CLQTLLDTK VLLDALTDPSRKTQKCLQTLLDTKFVHFID SRKTQKCLQTLLDTKFVHFIDAPSLALIMP K C L T K F 0 0 0 1 1 1 0 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 9 0 1090.5692 Q92616 Q92616 1595 1603 GCN1L1 Translational activator GCN1 yes yes 2 2.7657E-06 185.81 By MS/MS 3 0.816 1 1 1 3 1960600 1960600 0 2013 2068 2080 5071;5072;5073 3671;3672 3671 2 84951 0 CLSEQIADAYSSFR ILLLTAARDAEEALRCLSEQIADAYSSFRS RCLSEQIADAYSSFRSVRAIRIDGTDKATQ R C L F R S 2 1 0 1 1 1 1 0 0 1 1 0 0 1 0 3 0 0 1 0 0 0 14 0 1645.7406 Q5JTV8 Q5JTV8 424 437 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 8.412E-26 243.4 By MS/MS 6 0 1 1 3522900 3522900 0 2014 1610 2081 5074 3673 3673 1 27471 0 CLSHHVADAYTSSQK TIIFTAAREGRETLKCLSHHVADAYTSSQK CLSHHVADAYTSSQKVSPIQIDGAGRTWQD K C L Q K V 2 0 0 1 1 1 0 0 2 0 1 1 0 0 0 3 1 0 1 1 0 0 15 0 1702.7733 Q8NFQ8 Q8NFQ8 310 324 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 3 0.001814 110.44 By MS/MS 5.5 0.5 1 1 2 2535900 2535900 0 2015 1973 2082 5075;5076 3674 3674 1 60532 0 CLSQQADVR ANETFCLEIMDSLRRCLSQQADVRLMLYEG MDSLRRCLSQQADVRLMLYEGFYDVLRRNS R C L V R L 1 1 0 1 1 2 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1075.508 Q9NVI1 Q9NVI1 594 602 FANCI Fanconi anemia group I protein yes yes 2 0.00029397 157.99 By MS/MS 3 0 1 1 1235200 1235200 0 2016 2654 2083 5077 3675 3675 1 32245 0 CLSSATDPQTK EHLILKTTFEDLIQRCLSSATDPQTKRKLD LIQRCLSSATDPQTKRKLDDASKRLEFLYD R C L T K R 1 0 0 1 1 1 0 0 0 0 1 1 0 0 1 2 2 0 0 0 0 0 11 0 1206.5551 O94979 O94979 1130 1140 SEC31A Protein transport protein Sec31A yes yes 2 0.05185 76.228 By MS/MS 3.5 0.5 1 1 2 340840 340840 0 2017 362 2084 5078;5079 3676 3676 1 9030.6 0 CLTGLAVGLR VGKDTNVMLVALAAKCLTGLAVGLRKKFGQ ALAAKCLTGLAVGLRKKFGQYAGHVVPTIL K C L L R K 1 1 0 0 1 0 0 2 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1058.5906 Q14008 Q14008 343 352 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00094709 125.31 By MS/MS 2 0 1 1 208630 208630 0 2018 1405 2085 5080 3677 3677 1 10370 0 CLYALEEGIVR FRWHPGAHVGVGKNKCLYALEEGIVRYTKE GKNKCLYALEEGIVRYTKEVYVPHPRNTEA K C L V R Y 1 1 0 0 1 0 2 1 0 1 2 0 0 0 0 0 0 0 1 1 0 0 11 0 1321.67 Q9P0M9 Q9P0M9 88 98 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 7.1961E-05 166.07 By MS/MS 10 0 1 1 846170 846170 0 2019 2729 2086 5081 3678 3678 1 899390 0 CLYASVLTAQPR AIHRGGGQIIPTARRCLYASVLTAQPRLME ARRCLYASVLTAQPRLMEPIYLVEIQCPEQ R C L P R L 2 1 0 0 1 1 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 0 12 0 1377.7075 P13639 P13639 728 739 EEF2 Elongation factor 2 yes yes 2 1.1671E-24 250.06 By MS/MS 4.5 2.22 1 1 1 1 1 1 6 17754000 17754000 0 2020 576 2087 5082;5083;5084;5085;5086;5087 3679;3680;3681;3682 3680 4 492060 0 CMTNTPVVVR EKKLSAFRPAPRVIRCMTNTPVVVREGATV PRVIRCMTNTPVVVREGATVYATGTHAQVE R C M V R E 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 0 2 0 0 3 0 0 10 0 1175.5791 P32322 P32322 120 129 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 3.0023E-05 171.99 By MS/MS By matching 8.33 0.471 2 1 2 1 3100700 3073500 27158 2021 764 2088 5088;5089;5090 3683 3683 515 1 229800 231690 CNAIINEDPNAR TLSTLRYADRTKQIRCNAIINEDPNARLIR QIRCNAIINEDPNARLIRELQEEVARLREL R C N A R L 2 1 3 1 1 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 12 0 1385.6358 O43896 O43896 350 361 KIF1C Kinesin-like protein KIF1C yes yes 2 7.0583E-05 161.51 By MS/MS 4 0.816 1 1 1 3 937870 937870 0 2022 232 2089 5091;5092;5093 3684 3684 1 25633 0 CNEIINWLDK QGKINDEDKQKILDKCNEIINWLDKNQTAE KILDKCNEIINWLDKNQTAEKEEFEHQQKE K C N D K N 0 0 2 1 1 0 1 0 0 2 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1303.6231 P11142 P11142 574 583 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 1.0241E-10 206.49 By MS/MS 5 0 1 1 1698800 1698800 0 2023 546 2090 5094 3685 3685 1 69826 0 CNELQDIEK TPEEVIEYSAVFWERCNELQDIEKIMAQIE AVFWERCNELQDIEKIMAQIERGEARIQRR R C N E K I 0 0 1 1 1 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1147.5179 O60264;P28370 O60264 891 899 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.00022264 162.64 By MS/MS 3 0 1 1 1498000 1498000 0 2024 240;720 2091 5095 3686 3686 1 39105 0 CNEPAVWSQLAK EHIGNLDRAYEFAERCNEPAVWSQLAKAQL AERCNEPAVWSQLAKAQLQKGMVKEAIDSY R C N A K A 2 0 1 0 1 1 1 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 12 0 1401.6711 Q00610 Q00610 1102 1113 CLTC Clathrin heavy chain 1 yes yes 2 0.00078113 160.67 By MS/MS 3 1.41 1 1 1 1 1 5 1693300 1693300 0 2025 1235 2092 5096;5097;5098;5099;5100 3687;3688 3688 2 55656 0 CNGVLEGIR KAGKLDPHLVLDQLRCNGVLEGIRICRQGF VLDQLRCNGVLEGIRICRQGFPNRVVFQEF R C N I R I 0 1 1 0 1 0 1 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1016.5073 Q7Z406;P12883;P13535;Q9UKX3;Q9Y623;P13533;P12882;P11055;Q9UKX2;P35580;P35579;A7E2Y1 P35579 694 702 MYH14;MYH7;MYH8;MYH13;MYH4;MYH6;MYH1;MYH3;MYH2;MYH10;MYH9;MYH7B Myosin-14;Myosin-7;Myosin-8;Myosin-13;Myosin-4;Myosin-6;Myosin-1;Myosin-3;Myosin-2;Myosin-10;Myosin-9;Myosin-7B no no 2 0.0026132 123.21 By MS/MS 2.5 0.5 1 1 2 569400 569400 0 2026 793;794;1788;25 2093 5101;5102 3689;3690 3690 2 22878 0 CNTDDTIGDLKK EVVCNDRLGKKVRVKCNTDDTIGDLKKLIA RVKCNTDDTIGDLKKLIAAQTGTRWNKIVL K C N K K L 0 0 1 3 1 0 0 1 0 1 1 2 0 0 0 0 2 0 0 0 0 0 12 1 1378.6398 Q9BZL1 Q9BZL1 18 29 UBL5 Ubiquitin-like protein 5 yes yes 3 0.00064382 132.79 By MS/MS 10 0 1 1 438450 438450 0 2027 2424 2094 5103 3691;3692 3691 2 466030 0 CNTLITLIER DWFLKSRTAMELQRRCNTLITLIERENMEL ELQRRCNTLITLIERENMELEEKEKAEKKK R C N E R E 0 1 1 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 0 0 0 0 10 0 1231.6595 O60264 O60264 1001 1010 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 9.9304E-11 206.73 By MS/MS 3 0 1 1 599450 599450 0 2028 240 2095 5104 3693 3693 1 15649 0 CNVIITQPR QLLLERYVTEGRGARCNVIITQPRRISAVS EGRGARCNVIITQPRRISAVSVAQRVSHEL R C N P R R 0 1 1 0 1 1 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 9 0 1099.5808 Q7L2E3 Q7L2E3 484 492 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0020886 128.86 By MS/MS 3.5 0.5 1 1 2 4332800 4332800 0 2029 1763 2096 5105;5106 3694;3695 3694 2 114300 0 CPENAFFLDHVR IRRLIRGFVLRHAPRCPENAFFLDHVRTSF APRCPENAFFLDHVRTSFLLNLRRQLPQNV R C P V R T 1 1 1 1 1 0 1 0 1 0 1 0 0 2 1 0 0 0 0 1 0 0 12 0 1503.6929 O00159 O00159 802 813 MYO1C Unconventional myosin-Ic yes yes 3 9.0357E-08 190.66 By MS/MS 4.5 0.5 1 1 2 1968600 1968600 0 2030 72 2097 5107;5108 3696 3696 1 54653 0 CPFLIPFETR ASGALPDWCEQLTSKCPFLIPFETRQLYFT QLTSKCPFLIPFETRQLYFTCTAFGASRAI K C P T R Q 0 1 0 0 1 0 1 0 0 1 1 0 0 2 2 0 1 0 0 0 0 0 10 0 1278.6431 Q9ULT8 Q9ULT8 2071 2080 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0067771 101.64 By MS/MS 3.5 1.12 1 1 1 1 4 526030 526030 0 2031 2826 2098 5109;5110;5111;5112 3697;3698;3699;3700;3701 3699 5 17936 0 CPFTGNVSIR KTPKEAIEGTYIDKKCPFTGNVSIRGRILS YIDKKCPFTGNVSIRGRILSGVVTKMKMQR K C P I R G 0 1 1 0 1 0 0 1 0 1 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1149.5601 P62280 P62280 60 69 RPS11 40S ribosomal protein S11 yes yes 2 0.00042909 155.84 By MS/MS 9.5 0.5 1 1 2 6133700 6133700 0 2032 1127 2099 5113;5114 3702 3702 1 3536300 0 CPLSGACYSPEFK AASYRPIYRGKPVEKCPLSGACYSPEFKGQ EKCPLSGACYSPEFKGQICRVTTVTEIGKD K C P F K G 1 0 0 0 2 0 1 1 0 0 1 1 0 1 2 2 0 0 1 0 0 0 13 0 1514.6534 P53621 P53621 1185 1197 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 1.9983E-07 178.54 By MS/MS 3 1.41 1 1 1 1 1 5 3866100 3866100 0 2033 1005 2100 5115;5116;5117;5118;5119 3703;3704;3705;3706;3707 3703 5 132550 0 CPNLTYLNLSGNK SDNIISGGLEVLAEKCPNLTYLNLSGNKIK EKCPNLTYLNLSGNKIKDLSTVEALQNLKN K C P N K I 0 0 3 0 1 0 0 1 0 0 3 1 0 0 1 1 1 0 1 0 0 0 13 0 1492.7344 Q9BTT0 Q9BTT0 87 99 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 2 6.4324E-05 186.46 By MS/MS 8 0 1 1 856450 856450 0 2034 2352 2101 5120 3708 3708 1 56500 0 CPPGVVPACHNSK AMAAVGLSWEECKQRCPPGVVPACHNSKDT QRCPPGVVPACHNSKDTVTISGPQAPVFEF R C P S K D 1 0 1 0 2 0 0 1 1 0 0 1 0 0 3 1 0 0 0 2 0 0 13 0 1421.6544 P49327 P49327 634 646 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.032762 78.098 By MS/MS 2 0 1 1 221750 221750 0 2035 915 2102 5121 3709 3709 1 11022 0 CPQIVIAFYEER SDEADLVLAKEANMKCPQIVIAFYEERLTW NMKCPQIVIAFYEERLTWHSCPEDEAQ___ K C P E R L 1 1 0 0 1 1 2 0 0 2 0 0 0 1 1 0 0 0 1 1 0 0 12 0 1523.7442 P45973;Q13185 Q13185 160 171 CBX5;CBX3 Chromobox protein homolog 5;Chromobox protein homolog 3 no no 2 0.0013073 129.82 By MS/MS 9 0 1 1 127760 127760 0 2036 1344;872 2103 5122 3710 3710 1 73320 0 CPYKDTLGPMQK IVSCRICKGDHWTTRCPYKDTLGPMQKELA TTRCPYKDTLGPMQKELAEQLGLSTGEKEK R C P Q K E 0 0 0 1 1 1 0 1 0 0 1 2 1 0 2 0 1 0 1 0 0 0 12 1 1436.6792 O75821 O75821 169 180 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.041401 147.74 By MS/MS 7 0 1 1 583250 583250 0 2037 330 2104 5123 3711 3711 186 1 10423 0 CQDVIVAAR LKYARNINSHFANKKCQDVIVAARNLMTSE HFANKKCQDVIVAARNLMTSEIHNTVKIIP K C Q A R N 2 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 9 0 1030.523 O43264 O43264 404 412 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.0026132 123.21 By MS/MS 4.5 0.5 1 1 2 2440600 2440600 0 2038 189 2105 5124;5125 3712 3712 1 68293 0 CQNALQQVVAR MPVIMIIMRDHTYAKCQNALQQVVARQGRP TYAKCQNALQQVVARQGRPVVICDKEDTET K C Q A R Q 2 1 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1285.6561 Q06210 Q06210 620 630 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 1.5939E-12 214.23 By MS/MS 5 0 1 1 2595600 2595600 0 2039 1274 2106 5126 3713 3713 1 106690 0 CQQLAAYGILEK QQRSRMLATLFKDERCQQLAAYGILEKMYL DERCQQLAAYGILEKMYLDRIIRGNQLQEF R C Q E K M 2 0 0 0 1 2 1 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 12 0 1392.7071 Q9BT78 Q9BT78 255 266 COPS4 COP9 signalosome complex subunit 4 yes yes 2 0.00029997 178.46 By MS/MS 7 0 1 1 2467100 2467100 0 2040 2347 2107 5127 3714 3714 1 44088 0 CQQLQQEYSR NVNYEIPSLKKQIAKCQQLQQEYSRKEEEC KQIAKCQQLQQEYSRKEEECQAGAAEMREQ K C Q S R K 0 1 0 0 1 4 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1338.5986 Q96JB5 Q96JB5 136 145 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 1.3076E-28 257.27 By MS/MS 5 0 1 1 1709900 1709900 0 2041 2206 2108 5128 3715 3715 1 70282 0 CQSLADIEIK C Q I K 1 0 0 1 1 1 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1175.5856 REV__Q15643 yes yes 2 0.0064405 131.03 By MS/MS 4 0 1 1 0 0 0 + 2042 3029 2109 5129 3716 3716 1 0 0 CQVFEETQIGGER IQTSVNALSADVLGRCQVFEETQIGGERYN GRCQVFEETQIGGERYNFFTGCPKAKTCTF R C Q E R Y 0 1 0 0 1 2 3 2 0 1 0 0 0 1 0 0 1 0 0 1 0 0 13 0 1551.6988 Q99832 Q99832 345 357 CCT7 T-complex protein 1 subunit eta yes yes 2 1.251E-58 290.28 By MS/MS By MS/MS 5.1 2.47 1 1 1 1 1 2 1 1 1 9 1 152020000 151910000 106260 2043 2295 2110 5130;5131;5132;5133;5134;5135;5136;5137;5138;5139 3717;3718;3719;3720;3721;3722;3723;3724 3723 8 1651300 325890 CQVFEETQIGGERYNFFTGCPK IQTSVNALSADVLGRCQVFEETQIGGERYN QIGGERYNFFTGCPKAKTCTFILRGGAEQF R C Q P K A 0 1 1 0 2 2 3 3 0 1 0 1 0 3 1 0 2 0 1 1 0 0 22 1 2666.1894 Q99832 Q99832 345 366 CCT7 T-complex protein 1 subunit eta yes yes 3 1.472E-05 109.77 By MS/MS 6 0 1 1 7019800 7019800 0 2044 2295 2111 5140 3725 3725 1 54740 0 CSDFTEEICR KDGKSLTKDLGGNAKCSDFTEEICRRVKDL GGNAKCSDFTEEICRRVKDLD_________ K C S C R R 0 1 0 1 2 0 2 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 10 0 1315.5173 P50213 P50213 351 360 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 3.1466E-05 173.39 By MS/MS 7.5 0.5 1 1 2 3649800 3649800 0 2045 943 2112 5141;5142 3726;3727 3726 2 101330 0 CSDFVVVQFK SGPKREEIMESILFKCSDFVVVQFKDMDSS SILFKCSDFVVVQFKDMDSSYAKRDAFTDS K C S F K D 0 0 0 1 1 1 0 0 0 0 0 1 0 2 0 1 0 0 0 3 0 0 10 0 1227.5958 Q99700 Q99700 332 341 ATXN2 Ataxin-2 yes yes 2 1.9049E-10 199.68 By MS/MS 3 0 1 1 442960 442960 0 2046 2283 2113 5143 3728 3728 1 11564 0 CSEGVFLLTTTPR VEFASKPAARKAFERCSEGVFLLTTTPRPV ERCSEGVFLLTTTPRPVIVEPLEQLDDEDG R C S P R P 0 1 0 0 1 0 1 1 0 0 2 0 0 1 1 1 3 0 0 1 0 0 13 0 1479.7392 P23246 P23246 431 443 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 1.6634E-07 181.4 By MS/MS 4 0 1 1 172950 172950 0 2047 665 2114 5144 3729 3729 1 4721.4 0 CSEPPPVAR PFSECCMDISLSPSRCSEPPPVARLLQEEE SLSPSRCSEPPPVARLLQEEEQERRRPQSR R C S A R L 1 1 0 0 1 0 1 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 9 0 1011.4808 O14654 O14654 1065 1073 IRS4 Insulin receptor substrate 4 yes yes 2 0.0096518 105.57 By MS/MS 3 0 1 1 293140 293140 0 2048 118 2115 5145 3730 3730 1 7652.4 0 CSEQVQDFTK DVLIPKIMREKAKERCSEQVQDFTKCCKNS KAKERCSEQVQDFTKCCKNSGVLMVVKCRK R C S T K C 0 0 0 1 1 2 1 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 10 0 1240.5394 Q7Z7K0 Q7Z7K0 31 40 CMC1 COX assembly mitochondrial protein homolog yes yes 2 0.0020376 117.14 By MS/MS 10 0 1 1 158150 158150 0 2049 1810 2116 5146 3731 3731 1 168100 0 CSESIPK YRVEYAKSGRASCKKCSESIPKDSLRMAIM SGRASCKKCSESIPKDSLRMAIMVQSPMFD K C S P K D 0 0 0 0 1 0 1 0 0 1 0 1 0 0 1 2 0 0 0 0 0 0 7 0 819.37965 P09874 P09874 24 30 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0077484 163.34 By MS/MS 3.5 0.5 1 1 2 955120 955120 0 2050 521 2117 5147;5148 3732 3732 1 25994 0 CSILAAANPAYGR ISIAKAGILTTLNARCSILAAANPAYGRYN ARCSILAAANPAYGRYNPRRSLEQNIQLPA R C S G R Y 4 1 1 0 1 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 13 0 1362.6714 P33993 P33993 482 494 MCM7 DNA replication licensing factor MCM7 yes yes 2 1.2047E-34 256.24 By MS/MS 5.5 0.5 1 1 2 6084300 6084300 0 2051 775 2118 5149;5150 3733 3733 1 203360 0 CSLLDPFAAVR AALAPHLDDALRALRCSLLDPFAAVRRESC RALRCSLLDPFAAVRRESCSCAAALAQATP R C S V R R 2 1 0 1 1 0 0 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 11 0 1247.6332 Q86Y56 Q86Y56 173 183 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.0021375 119.75 By MS/MS 4.5 0.5 1 1 2 1051600 1051600 0 2052 1844 2119 5151;5152 3734;3735 3734 2 37257 0 CSPIGVYTSGK DPGTAKSQLLKFVEKCSPIGVYTSGKGSSA FVEKCSPIGVYTSGKGSSAAGLTASVMRDP K C S G K G 0 0 0 0 1 0 0 2 0 1 0 1 0 0 1 2 1 0 1 1 0 0 11 0 1167.5594 P33992 P33992 397 407 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.051459 76.332 By MS/MS 5.5 0.5 1 1 2 1718100 1718100 0 2053 774 2120 5153;5154 3736 3736 1 45729 0 CSQCHTVEK ______________________________ KIFIMKCSQCHTVEKGGKHKTGPNLHGLFG K C S E K G 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 9 0 1147.475 P99999 P99999 15 23 CYCS Cytochrome c yes yes 2 0.0021123 128.6 By MS/MS 10 0 1 1 60187 60187 0 2054 1227 2121 5155 3737 3737 1 63972 0 CSSILLHGK HLLVMKGAPERILDRCSSILLHGKEQPLDE ERILDRCSSILLHGKEQPLDEELKDAFQNA R C S G K E 0 0 0 0 1 0 0 1 1 1 2 1 0 0 0 2 0 0 0 0 0 0 9 0 1013.5328 P05023 P05023 518 526 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2;3 0.0029209 127.46 By MS/MS 2.5 1.12 2 2 2 2 8 6258100 6258100 0 2055 463 2122 5156;5157;5158;5159;5160;5161;5162;5163 3738;3739;3740;3741;3742;3743 3738 6 236200 0 CSSVTGVQR LEDSGFDEQQEFRSRCSSVTGVQRRVHEGS QEFRSRCSSVTGVQRRVHEGSQKSQPRRRH R C S Q R R 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 2 1 0 0 2 0 0 9 0 992.47093 O60343 O60343 316 324 TBC1D4 TBC1 domain family member 4 yes yes 2 4.2409E-06 180.45 By MS/MS 3.5 0.5 1 1 2 325760 325760 0 2056 246 2123 5164;5165 3744 3744 1 8627.6 0 CSVLAAANPVYGR VTIAKAGIHARLNARCSVLAAANPVYGRYD ARCSVLAAANPVYGRYDQYKTPMENIGLQD R C S G R Y 3 1 1 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1376.6871 P25205 P25205 446 458 MCM3 DNA replication licensing factor MCM3 yes yes 2 1.8665E-17 215.06 By MS/MS 4 0 1 1 2965200 2965200 0 2057 683 2124 5166 3745 3745 1 80947 0 CSVLSTLR LHVRDVSHPEAELQKCSVLSTLRGLQLPAP PEAELQKCSVLSTLRGLQLPAPLLDSMVEV K C S L R G 0 1 0 0 1 0 0 0 0 0 2 0 0 0 0 2 1 0 0 1 0 0 8 0 934.4906 O43824 O43824 394 401 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.0020118 157.33 By MS/MS 5.5 0.5 1 1 2 3006200 3006200 0 2058 228 2125 5167;5168 3746 3746 1 52723 0 CTDDFNGAQCK KMNVSPDVNYEELARCTDDFNGAQCKAVCV ELARCTDDFNGAQCKAVCVEAGMIALRRGA R C T C K A 1 0 1 2 2 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 11 0 1314.4969 P17980 P17980 387 397 PSMC3 26S protease regulatory subunit 6A yes yes 2 8.996E-30 266.99 By MS/MS 6.5 0.5 1 1 2 2313500 2313500 0 2059 618 2126 5169;5170 3747 3747 1 19435 0 CTDQLLLLGQTDR NLQEVKRSTYDHTRKCTDQLLLLGQTDRAV RKCTDQLLLLGQTDRAVQLLLETSADNQHY K C T D R A 0 1 0 2 1 2 0 1 0 0 4 0 0 0 0 0 2 0 0 0 0 0 13 0 1531.7664 Q9BZH6 Q9BZH6 1000 1012 WDR11 WD repeat-containing protein 11 yes yes 2 0.012287 114.76 By MS/MS 1 0 1 1 86360 86360 0 2060 2422 2127 5171 3748 3748 1 4219.4 0 CTGGEVGATSALAPK PPKFDPNEIKVVYLRCTGGEVGATSALAPK CTGGEVGATSALAPKIGPLGLSPKKVGDDI R C T P K I 3 0 0 0 1 0 1 3 0 0 1 1 0 0 1 1 2 0 0 1 0 0 15 0 1417.6871 P30050 P30050 17 31 RPL12 60S ribosomal protein L12 yes yes 2 0.00055892 146.07 By MS/MS By matching 9.67 0.471 1 2 2 1 548290 519740 28550 2061 733 2128 5172;5173;5174 3749;3750 3750 2 443890 732300 CTHWAEGGK ISRLSREHGAFDAVKCTHWAEGGKGALALA AFDAVKCTHWAEGGKGALALAQAVQRAAQA K C T G K G 1 0 0 0 1 0 1 2 1 0 0 1 0 0 0 0 1 1 0 0 0 0 9 0 1044.4447 P11586 P11586 785 793 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.004006 117.89 By MS/MS 4 0 2 2 2547000 2547000 0 2062 556 2129 5175;5176 3751;3752 3752 2 69529 0 CTQDLGNSTK RDGKLKPLPGETMEKCTQDLGNSTKAVSSA ETMEKCTQDLGNSTKAVSSAIAQLLGEVAQ K C T T K A 0 0 1 1 1 1 0 1 0 0 1 1 0 0 0 1 2 0 0 0 0 0 10 0 1122.4975 Q9Y490 Q9Y490 1087 1096 TLN1 Talin-1 yes yes 2 4.823E-38 285.27 By MS/MS 2.5 0.5 1 1 2 817650 817650 0 2063 2947 2130 5177;5178 3753 3753 1 37096 0 CTSFLVDELGVVDR EPEYMEEVRRQHMERCTSFLVDELGVVDRS RCTSFLVDELGVVDRSQAGDRIFFVSAKEV R C T D R S 0 1 0 2 1 0 1 1 0 0 2 0 0 1 0 1 1 0 0 3 0 0 14 0 1608.7818 O95140 O95140 281 294 MFN2 Mitofusin-2 yes yes 2 9.4679E-09 193.73 By MS/MS 5 0 1 1 323940 323940 0 2064 366 2131 5179 3754 3754 1 13315 0 CTVFHGAQVEDAFR LVQAGIRDGVVRPLKCTVFHGAQVEDAFRY KCTVFHGAQVEDAFRYMAQGKHIGKVVVQV K C T F R Y 2 1 0 1 1 1 1 1 1 0 0 0 0 2 0 0 1 0 0 2 0 0 14 0 1635.7464 P49327 P49327 1828 1841 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 1.5612E-05 163.71 By MS/MS 2 0.816 2 2 2 6 5748900 5748900 0 2065 915 2132 5180;5181;5182;5183;5184;5185 3755;3756;3757;3758 3758 4 192420 0 CTVIAAANPIGGR ISISKAGIVTSLQARCTVIAAANPIGGRYD ARCTVIAAANPIGGRYDPSLTFSENVDLTE R C T G R Y 3 1 1 0 1 0 0 2 0 2 0 0 0 0 1 0 1 0 0 1 0 0 13 0 1298.6765 P49736 P49736 624 636 MCM2 DNA replication licensing factor MCM2 yes yes 2 1.4261E-05 171.62 By MS/MS 3.5 0.5 1 1 2 1859300 1859300 0 2066 928 2133 5186;5187 3759;3760 3760 2 50138 0 CTVVAAVLGSGR LRQLNLAGVRMTPVKCTVVAAVLGSGRHAL PVKCTVVAAVLGSGRHALDEVNLASCQLDP K C T G R H 2 1 0 0 1 0 0 2 0 0 1 0 0 0 0 1 1 0 0 3 0 0 12 0 1188.6285 Q86UT6 Q86UT6 713 724 NLRX1 NLR family member X1 yes yes 2 6.0741E-07 177.57 By MS/MS 4.5 0.5 1 1 2 1224300 1224300 0 2067 1825 2134 5188;5189 3761 3761 1 37510 0 CVANNQVETLEK GIRARSARLQWFCDRCVANNQVETLEKLVE CDRCVANNQVETLEKLVELTQKLFECDRDQ R C V E K L 1 0 2 0 1 1 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1403.6715 P42704 P42704 930 941 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 8.9552E-33 298.67 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 86528000 86528000 0 2068 854 2135 5190;5191;5192;5193;5194;5195 3762;3763;3764;3765;3766 3764 5 2282600 0 CVDDAAIVLGALAGPDPR IPLVNSMDVPGILTRCVDDAAIVLGALAGP DAAIVLGALAGPDPRDSTTVHEPINKPFML R C V P R D 4 1 0 3 1 0 0 2 0 1 2 0 0 0 2 0 0 0 0 2 0 0 18 0 1808.9091 Q9H0R6 Q9H0R6 236 253 QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 2 1.3216E-11 175.29 By MS/MS 6.5 0.5 1 1 2 4392900 4392900 0 2069 2456 2136 5196;5197 3767 3767 1 35090 0 CVEENNGVAK FGTSSSSATLPLMMKCVEENNGVAKHISRF PLMMKCVEENNGVAKHISRFILPIGATVNM K C V A K H 1 0 2 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 10 0 1118.5026 Q15758 Q15758 363 372 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 3.4876E-07 191.17 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 3007000 3007000 0 2070 1518 2137 5198;5199;5200;5201;5202;5203 3768;3769 3768 2 109370 0 CVELGAYGQAVR RKLQFLFELPSRLTKCVELGAYGQAVRYQG LTKCVELGAYGQAVRYQGRAQAVLQQYQHL K C V V R Y 2 1 0 0 1 1 1 2 0 0 1 0 0 0 0 0 0 0 1 2 0 0 12 0 1321.6449 Q9UID3 Q9UID3 190 201 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.0057145 99.973 By MS/MS 5 0 1 1 0 0 0 2071 2791 2138 5204 3770 3770 1 0 0 CVESLSFIVR VGLDLGPHDTKSLLKCVESLSFIVRDAAHI KSLLKCVESLSFIVRDAAHITPDNFELCVK K C V V R D 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 2 0 0 0 2 0 0 10 0 1208.6223 Q92538 Q92538 1392 1401 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.00069217 137.13 By MS/MS 2 0 1 1 86276 86276 0 2072 2055 2139 5205 3771 3771 1 4288.4 0 CVLFETFGR VGRYLETKPADLGPRCVLFETFGRCPYGVT ADLGPRCVLFETFGRCPYGVTCRFAGAHLR R C V G R C 0 1 0 0 1 0 1 1 0 0 1 0 0 2 0 0 1 0 0 1 0 0 9 0 1127.5434 Q96G46 Q96G46 162 170 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 2 0.00092147 143.89 By MS/MS 5 0 1 1 351980 351980 0 2073 2177 2140 5206 3772 3772 1 14468 0 CVLLSNLSSTSHVPEVDPGSAELQK LVNCLRREPGGNRLRCVLLSNLSSTSHVPE SHVPEVDPGSAELQKVLQGDLVMNVYRDGA R C V Q K V 1 0 1 1 1 1 2 1 1 0 4 1 0 0 2 5 1 0 0 3 0 0 25 0 2666.3221 P49327 P49327 1471 1495 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 4.3964E-07 108.28 By MS/MS 2 0.816 1 1 1 3 2332300 2332300 0 2074 915 2141 5207;5208;5209 3773;3774;3775 3773 3 86698 0 CVLPEEDSGELAKPK RLWQTVVGKTYGLWKCVLPEEDSGELAKPK CVLPEEDSGELAKPKIGFPETTEEELEEIA K C V P K I 1 0 0 1 1 0 3 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 15 1 1670.8185 Q9Y3F4 Q9Y3F4 305 319 STRAP Serine-threonine kinase receptor-associated protein yes yes 2;3 2.3777E-06 166.29 By MS/MS 7.8 0.748 2 2 1 5 13065000 13065000 0 2075 2937 2142 5210;5211;5212;5213;5214 3776;3777 3777 2 363320 0 CVLSGPPQLEK LSGMILTLKETGLPKCVLSGPPQLEKYLEA GLPKCVLSGPPQLEKYLEAIKIFSGPLKGI K C V E K Y 0 0 0 0 1 1 1 1 0 0 2 1 0 0 2 1 0 0 0 1 0 0 11 0 1226.6329 Q9BQ52 Q9BQ52 136 146 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.012606 96.015 By MS/MS 4 0 1 1 1670300 1670300 0 2076 2305 2143 5215 3778 3778 1 45596 0 CVNLVQK LQSGFLPYCEPVYQRCVNLVQKTLAQAMLN YCEPVYQRCVNLVQKTLAQAMLNNAQPDQY R C V Q K T 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 7 0 859.45857 Q92973 Q92973 620 626 TNPO1 Transportin-1 yes yes 2 0.019116 128.82 By MS/MS 4 0 1 1 1194600 1194600 0 2077 2093 2144 5216 3779 3779 1 32611 0 CVQSNIVLLTQAFR TTSDGVMLDKDLFKKCVQSNIVLLTQAFRR KCVQSNIVLLTQAFRRKFVIPDFMSFTSHI K C V F R R 1 1 1 0 1 2 0 0 0 1 2 0 0 1 0 1 1 0 0 2 0 0 14 0 1647.8767 O94925 O94925 203 216 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 1.7653E-18 273.15 By MS/MS 6 0 1 1 1549000 1549000 0 2078 359 2145 5217 3780 3780 1 12079 0 CVSCLPGQR RLAQVAKAVTQALNRCVSCLPGQRDVDNAL TQALNRCVSCLPGQRDVDNALRAVGDASKR R C V Q R D 0 1 0 0 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 9 0 1075.4903 Q9Y490 Q9Y490 1199 1207 TLN1 Talin-1 yes yes 2 0.00089973 144.38 By MS/MS 2 0 1 1 836810 836810 0 2079 2947 2146 5218 3781 3781 1 41594 0 CVSELVIESR LRDEKDSQGENMFLRCVSELVIESREFDMI NMFLRCVSELVIESREFDMILGKLENDGSR R C V S R E 0 1 0 0 1 0 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1190.5965 Q8N1F7 Q8N1F7 569 578 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.00087065 128.86 By MS/MS 4.5 0.5 1 1 2 3389100 3389100 0 2080 1898 2147 5219;5220 3782 3782 1 125800 0 CVVVGDGAVGK ______________________________ QSIKCVVVGDGAVGKTCLLICYTTNAFPKE K C V G K T 1 0 0 1 1 0 0 3 0 0 0 1 0 0 0 0 0 0 0 4 0 0 11 0 1059.5383 P60953;P17081;Q9H4E5;P60763;P15153;P63000;P84095 P84095 6 16 CDC42;RHOQ;RHOJ;RAC3;RAC2;RAC1;RHOG Cell division control protein 42 homolog;Rho-related GTP-binding protein RhoQ;Rho-related GTP-binding protein RhoJ;Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 1;Rho-related GTP-binding protein RhoG no no 2 0.0020043 120.31 By MS/MS 9 0 1 1 861400 861400 0 2081 1217;1078;1073;1166 2148 5221 3783 3783 1 494370 0 CYIASAGADALAK KFEESIHDVAFHPSKCYIASAGADALAKVF SKCYIASAGADALAKVFV____________ K C Y A K V 5 0 0 1 1 0 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 13 0 1309.6336 O43815 O43815 765 777 STRN Striatin yes yes 2 0.0042604 107.45 By MS/MS 4 0 1 1 853940 853940 0 2082 225 2149 5222 3784 3784 1 23312 0 CYLGATCAYDAAK GTVLERDGHYAVAAKCYLGATCAYDAAKVL AKCYLGATCAYDAAKVLAKKGDAASLRTAA K C Y A K V 4 0 0 1 2 0 0 1 0 0 1 1 0 0 0 0 1 0 2 0 0 0 13 0 1462.6221 Q8TEQ6 Q8TEQ6 1045 1057 GEMIN5 Gem-associated protein 5 yes yes 2 6.7203E-12 206.49 By MS/MS By matching 2.75 0.829 2 1 1 3 1 1451500 1407200 44236 2083 2003 2150 5223;5224;5225;5226 3785 3785 1 38047 37242 CYLTMTQALEAR LGVQDKLVQTPLTDRCYLTMTQALEARLGG TDRCYLTMTQALEARLGGSPFGPAGTGKTE R C Y A R L 2 1 0 0 1 1 1 0 0 0 2 0 1 0 0 0 2 0 1 0 0 0 12 0 1455.685 Q14204 Q14204 1888 1899 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.0138E-16 221.59 By MS/MS 1.5 0.5 1 1 2 761280 761280 0 2084 1421 2151 5227;5228 3786 3786 1098 1 37347 0 CYSCGEFGHIQK PGHLARDCDHADEQKCYSCGEFGHIQKDCT EQKCYSCGEFGHIQKDCTKVKCYRCGETGH K C Y Q K D 0 0 0 0 2 1 1 2 1 1 0 1 0 1 0 1 0 0 1 0 0 0 12 0 1484.6177 P62633 P62633 119 130 CNBP Cellular nucleic acid-binding protein yes yes 2;3 0.0055984 91.123 By MS/MS 9.5 0.5 2 2 4 2017600 2017600 0 2085 1138 2152 5229;5230;5231;5232 3787;3788 3787 2 1284300 0 DAAASASTPAQAPTSDSPVAEDASR DDLATDARGRGAGRRDAAASASTPAQAPTS QAPTSDSPVAEDASRRRPCRACVDFKTWMR R D A S R R 8 1 0 3 0 1 1 0 0 0 0 0 0 0 3 5 2 0 0 1 0 0 25 0 2372.0728 P55789 P55789 43 67 GFER FAD-linked sulfhydryl oxidase ALR yes yes 3 7.7047E-09 127.96 By MS/MS 9 0 1 1 441390 441390 0 2086 1036 2153 5233 3789 3789 1 253320 0 DAAFEALGTALK AALLKHINDSAPEVRDAAFEALGTALKVVG EVRDAAFEALGTALKVVGEKAVNPFLADVD R D A L K V 4 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 12 0 1205.6292 Q14008 Q14008 457 468 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 5.2256E-07 180.09 By MS/MS 3.67 1.25 1 1 1 3 2246700 2246700 0 2087 1405 2154 5234;5235;5236 3790;3791 3790 2 103520 0 DAAFQNVLTHVCLD QQDLHRAIEKMKKSKDAAFQNVLTHVCLD_ KDAAFQNVLTHVCLD_______________ K D A L D - 2 0 1 2 1 1 0 0 1 0 2 0 0 1 0 0 1 0 0 2 0 0 14 0 1601.7508 Q8NBU5 Q8NBU5 348 361 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 2.0681E-05 159.44 By MS/MS 7.5 0.5 1 1 2 512120 512120 0 2088 1947 2155 5237;5238 3792;3793 3792 2 20777 0 DAAGIAMEAIAFAR GGRTMVQLFEKGYGKDAAGIAMEAIAFARN KDAAGIAMEAIAFARNQGFDVVLVDTAGRM K D A A R N 6 1 0 1 0 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 14 0 1405.7024 P08240 P08240 497 510 SRPR Signal recognition particle receptor subunit alpha yes yes 2 1.1863E-05 162.26 By MS/MS 6 1 1 1 2 521250 521250 0 2089 502 2156 5239;5240 3794;3795 3794 301 2 19884 0 DAAGSGDKPGADTGR ALEMLTAFASHIRARDAAGSGDKPGADTGR DAAGSGDKPGADTGR_______________ R D A G R - 3 1 0 3 0 0 0 4 0 0 0 1 0 0 1 1 1 0 0 0 0 0 15 1 1373.6171 Q96EL3 Q96EL3 98 112 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2;3 0.00012076 141.73 By MS/MS 10 0 2 2 861380 861380 0 2090 2163 2157 5241;5242 3796;3797 3797 2 915560 0 DAAHITPDNFELCVK KSLLKCVESLSFIVRDAAHITPDNFELCVK DAAHITPDNFELCVKTLRIFVEASLNGGCK R D A V K T 2 0 1 2 1 0 1 0 1 1 1 1 0 1 1 0 1 0 0 1 0 0 15 0 1728.8141 Q92538 Q92538 1402 1416 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2;3 0.0064392 85.554 By MS/MS 2.33 0.471 2 1 3 637740 637740 0 2091 2055 2158 5243;5244;5245 3798;3799;3800 3800 3 27173 0 DAAINSLVEIYR PHICNLLGDPNSQVRDAAINSLVEIYRHVG QVRDAAINSLVEIYRHVGERVRADLSKKGL R D A Y R H 2 1 1 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 1 0 0 12 0 1362.7143 Q7Z460 Q7Z460 185 196 CLASP1 CLIP-associating protein 1 yes yes 2 1.2428E-05 187.16 By MS/MS 3.5 0.5 1 1 2 641210 641210 0 2092 1790 2159 5246;5247 3801 3801 1 16777 0 DAAIYLVTSLASK LQEYAKNPSVNWKHKDAAIYLVTSLASKAQ HKDAAIYLVTSLASKAQTQKHGITQANELV K D A S K A 3 0 0 1 0 0 0 0 0 1 2 1 0 0 0 2 1 0 1 1 0 0 13 0 1350.7395 P55060 P55060 428 440 CSE1L Exportin-2 yes yes 2 8.43E-05 156.01 By MS/MS 4 0 1 1 248380 248380 0 2093 1025 2160 5248 3802;3803 3802 2 6780.4 0 DAALLEAAR AALVVHCYSKSPSNKDAALLEAARANNMQE KSPSNKDAALLEAARANNMQEVSRLLSEGA K D A A R A 4 1 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 928.49779 Q9H078 Q9H078 135 143 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.000187 164.96 By MS/MS 5.5 0.5 1 1 2 4059000 4059000 0 2094 2448 2161 5249;5250 3804 3804 1 38973 0 DAANILVMGVENSAK DLASHGYVEVTSLPRDAANILVMGVENSAK DAANILVMGVENSAKEGDPGTIFFFREGAA R D A A K E 3 0 2 1 0 0 1 1 0 1 1 1 1 0 0 1 0 0 0 2 0 0 15 0 1530.7712 Q9NWS8 Q9NWS8 205 219 RMND1 Required for meiotic nuclear division protein 1 homolog yes yes 2 1.1055E-09 213.18 By MS/MS 8 0 1 1 329490 329490 0 2095 2668 2162 5251 3805 3805 1 21737 0 DAANLLNDALAIR LNILALVYRDQNKYKDAANLLNDALAIREK YKDAANLLNDALAIREKTLGKDHPAVAATL K D A I R E 4 1 2 2 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 13 0 1368.7361 Q07866 Q07866 273 285 KLC1 Kinesin light chain 1 yes yes 2 6.0014E-17 205.56 By MS/MS 6 0.816 1 1 1 3 1448200 1448200 0 2096 1284 2163 5252;5253;5254 3806;3807;3808 3806 3 11823 0 DAASVDKVLELK PVTGRSRGFGFVLFKDAASVDKVLELKEHK LFKDAASVDKVLELKEHKLDGKLIDPKRAK K D A L K E 2 0 0 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 2 0 0 12 1 1286.7082 O14979 O14979 198 209 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2 0.00054168 160.91 By MS/MS 7.5 0.5 1 1 2 1450700 1450700 0 2097 141 2164 5255;5256 3809 3809 1 37277 0 DAATIMQPYFTSNGLVTK DEGEEAASPMLQIQRDAATIMQPYFTSNGL TIMQPYFTSNGLVTKALEHAFQLEHIMDLT R D A T K A 2 0 1 1 0 1 0 1 0 1 1 1 1 1 1 1 3 0 1 1 0 0 18 0 1955.9663 Q14204 Q14204 2418 2435 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.2112E-14 188.96 By MS/MS 2 0 1 1 255810 255810 0 2098 1421 2165 5257 3810;3811 3810 1099 2 12715 0 DACDGHEIGR IIESYGAALMEVVCRDACDGHEIGRMLALA EVVCRDACDGHEIGRMLALALLDRIVSVDK R D A G R M 1 1 0 2 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 10 0 1128.4618 Q92621 Q92621 1484 1493 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0090954 103.7 By MS/MS 2 0 1 1 0 0 0 2099 2070 2166 5258 3812 3812 1 0 0 DACLGIIK PFTLEELIMLSRCLRDACLGIIKLAYPETK MLSRCLRDACLGIIKLAYPETKPEVREEYI R D A I K L 1 0 0 1 1 0 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 8 0 888.47389 Q15386 Q15386 551 558 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.023957 101.64 By MS/MS 4 0 1 1 1097800 1097800 0 2100 1494 2167 5259 3813 3813 1 29969 0 DACLNAR FTGREFDELNPSAQRDACLNARCFARVEPS ELNPSAQRDACLNARCFARVEPSHKSKIVE R D A A R C 2 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 818.37049 P16615 P16615 667 673 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.017424 133.47 By MS/MS 3 1.41 1 1 1 1 1 5 8368700 8368700 0 2101 608 2168 5260;5261;5262;5263;5264 3814;3815 3814 2 359270 0 DACLVANILDPR SQGTKRPGGPSNVLRDACLVANILDPRIKQ VLRDACLVANILDPRIKQEIIKKFIKQHLS R D A P R I 2 1 1 2 1 0 0 0 0 1 2 0 0 0 1 0 0 0 0 1 0 0 12 0 1355.6867 Q5VIR6 Q5VIR6 240 251 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.015475 90.913 By MS/MS 4.5 0.5 1 1 2 1278600 1278600 0 2102 1645 2169 5265;5266 3816 3816 1 37416 0 DADKSIIR CFTTEVTDFAGQYVKDADKSIIRTLKEQGR FAGQYVKDADKSIIRTLKEQGRLLVATTFT K D A I R T 1 1 0 2 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 8 1 916.49779 P41252 P41252 372 379 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.03381 82.279 By MS/MS 3.5 0.5 1 1 2 1846300 1846300 0 2103 840 2170 5267;5268 3817 3817 1 48395 0 DADSITLFDVQQK CDEIFYAGTGNLLLRDADSITLFDVQQKRT LRDADSITLFDVQQKRTLASVKISKVKYVI R D A Q K R 1 0 0 3 0 2 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 13 0 1478.7253 P53621 P53621 468 480 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 3.1919E-25 237.93 By MS/MS 2.5 1.12 1 1 1 1 4 5027000 5027000 0 2104 1005 2171 5269;5270;5271;5272 3818;3819;3820;3821 3818 4 154080 0 DADSITLFDVQQKR CDEIFYAGTGNLLLRDADSITLFDVQQKRT RDADSITLFDVQQKRTLASVKISKVKYVIW R D A K R T 1 1 0 3 0 2 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 1 1634.8264 P53621 P53621 468 481 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 2.6221E-25 245.08 By MS/MS 2.88 1.36 2 1 2 2 1 8 6987700 6987700 0 2105 1005 2172 5273;5274;5275;5276;5277;5278;5279;5280 3822;3823;3824;3825 3825 4 219240 0 DADSQNPDAPEGK SNLENSTYDLYTIPKDADSQNPDAPEGKRS PKDADSQNPDAPEGKRSSGLTAVWVARNRF K D A G K R 2 0 1 3 0 1 1 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 13 0 1342.5637 P53621 P53621 399 411 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 2.4098E-25 241.39 By MS/MS 1.5 0.5 1 1 2 991760 991760 0 2106 1005 2173 5281;5282 3826;3827 3826 2 48688 0 DADSQNPDAPEGKR SNLENSTYDLYTIPKDADSQNPDAPEGKRS KDADSQNPDAPEGKRSSGLTAVWVARNRFA K D A K R S 2 1 1 3 0 1 1 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 14 1 1498.6648 P53621 P53621 399 412 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.00020429 160.91 By MS/MS 2 0.816 2 2 2 6 1347300 1347300 0 2107 1005 2174 5283;5284;5285;5286;5287;5288 3828;3829;3830 3829 3 63742 0 DADVQNFVSFISK AMMRKATASRLVTQRDADVQNFVSFISKDS QRDADVQNFVSFISKDSIQKSLQMYLERLK R D A S K D 1 0 1 2 0 1 0 0 0 1 0 1 0 2 0 2 0 0 0 2 0 0 13 0 1468.7198 P42126 P42126 271 283 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 2 5.6393E-08 190.78 By MS/MS 8 0 1 1 600840 600840 0 2108 844 2175 5289 3831 3831 1 39637 0 DAEAWFNEK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1108.4825 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 CON__P13645 335 343 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 yes no 2 7.4507E-10 214.23 By MS/MS By MS/MS 5.5 2.87 2 2 2 2 2 2 2 2 2 2 10 10 38321000 24620000 13701000 + 2109 49 2176 5290;5291;5292;5293;5294;5295;5296;5297;5298;5299;5300;5301;5302;5303;5304;5305;5306;5307;5308;5309 3832;3833;3834;3835;3836;3837;3838;3839;3840;3841;3842;3843;3844;3845;3846;3847;3848;3849;3850 3849 19 4777000 47692000 DAEAWFNEKSK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT QNRKDAEAWFNEKSKELTTEIDNNIEQISS K D A S K E 2 0 1 1 0 0 2 0 0 0 0 2 0 1 0 1 0 1 0 0 0 0 11 1 1323.6095 CON__P13645;P13645 CON__P13645 335 345 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.013286 122.96 By MS/MS 5 1.41 1 1 1 1 1 5 349940 0 349940 + 2110 49 2177 5310;5311;5312;5313;5314 3851;3852 3852 2 0 848900 DAEEWFFTK EMRDQYEKMAEKNRKDAEEWFFTKTEELNR AEKNRKDAEEWFFTKTEELNREVATNSELV K D A T K T 1 0 0 1 0 0 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 0 9 0 1171.5186 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 301 309 KRT14 Keratin, type I cytoskeletal 14 yes no 2 0.0019131 166.3 By MS/MS By MS/MS 3.25 1.09 1 2 1 2 2 239030 80670 158360 + 2111 35 2178 5315;5316;5317;5318 3853;3854;3855 3854 3 2105.9 180670 DAEGILEDLQSYR ESEKEIYNQVNVVLKDAEGILEDLQSYRGA LKDAEGILEDLQSYRGAGHEIREAIQHPAD K D A Y R G 1 1 0 2 0 1 2 1 0 1 2 0 0 0 0 1 0 0 1 0 0 0 13 0 1507.7155 Q9NUQ9 Q9NUQ9 45 57 FAM49B Protein FAM49B yes yes 2 0.00032492 141.71 By MS/MS 8 0 1 1 153600 153600 0 2112 2642 2179 5319 3856 3856 1 10133 0 DAETWFLSK EMRDQYEQMAEKNRRDAETWFLSKTEELNK AEKNRRDAETWFLSKTEELNKEVASNSELV R D A S K T 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 1 0 0 0 0 9 0 1095.5237 CON__P08779;P08779 CON__P08779 303 311 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.0010268 141.52 By MS/MS 5 0 1 1 273010 273010 0 + 2113 47 2180 5320 3857 3857 1 11222 0 DAEVVLTSR SAYHNLFGLPLISRRDAEVVLTSRELDSLA PLISRRDAEVVLTSRELDSLALNQSTGLPT R D A S R E 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 2 0 0 9 0 988.51892 Q96RR1 Q96RR1 257 265 PEO1 Twinkle protein, mitochondrial yes yes 2 0.028612 91.867 By MS/MS 5 0 1 1 56967 0 56967 2114 2250 2181 5321 3858 3858 1 0 168560 DAFALAK QLVQMFIGDGAKLVRDAFALAKEKAPSIIF GDGAKLVRDAFALAKEKAPSIIFIDELDAI R D A A K E 3 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 734.39629 P17980 P17980 270 276 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.019274 128.38 By MS/MS 6.5 0.5 1 1 2 5204700 5204700 0 2115 618 2182 5322;5323 3859 3859 1 45499 0 DAFITAICK TMAALCGRLGLVTSRDAFITAICKGSLPPH GLVTSRDAFITAICKGSLPPHYALTVLNTT R D A C K G 2 0 0 1 1 0 0 0 0 2 0 1 0 1 0 0 1 0 0 0 0 0 9 0 1037.5216 Q7Z3U7 Q7Z3U7 602 610 MON2 Protein MON2 homolog yes yes 2 0.0028137 121.05 By MS/MS 3 0 1 1 785310 785310 0 2116 1786 2183 5324 3860 3860 1 20500 0 DAFLGSFLYEYSR FAEDKDVCKNYQEAKDAFLGSFLYEYSRRH AKDAFLGSFLYEYSRRHPEYAVSVLLRLAK K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 5.2888E-12 208.17 By MS/MS 6 0 1 1 542150 542150 0 + 2117 43 2184 5325 3861 3861 1 4227.7 0 DAFLVFR SGPSPGAKFSHILQKDAFLVFRSLCKLSMK KFSHILQKDAFLVFRSLCKLSMKPLSDGPP K D A F R S 1 1 0 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 7 0 866.46504 Q9Y6D6;Q9Y6D5 Q9Y6D6 422 428 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.021307 122.79 By MS/MS 2.5 0.5 1 1 2 215070 215070 0 2118 3003;3002 2185 5326;5327 3862 3862 1 7779.2 0 DAFQNAYLELGGLGER ILLHGKEQPLDEELKDAFQNAYLELGGLGE AFQNAYLELGGLGERVLGFCHLFLPDEQFP K D A E R V 2 1 1 1 0 1 2 3 0 0 3 0 0 1 0 0 0 0 1 0 0 0 16 0 1751.8479 P05023 P05023 536 551 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0057798 115.26 By MS/MS 3.5 0.5 1 1 2 218330 218330 0 2119 463 2186 5328;5329 3863 3863 1 5877.8 0 DAFVAIVQSVK DVEHTIKKEMSGDVRDAFVAIVQSVKNKPL GDVRDAFVAIVQSVKNKPLFFADKLYKSMK R D A V K N 2 0 0 1 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 3 0 0 11 0 1175.655 P08133 P08133 588 598 ANXA6 Annexin A6 yes yes 2 0.0035951 113.63 By MS/MS 5 0 1 1 253990 253990 0 2120 497 2187 5330 3864 3864 1 10440 0 DAFVYAIK MPATYCEIDLDKEKRDAFVYAIKNHYWYQM DLDKEKRDAFVYAIKNHYWYQMYIDDLPIW R D A I K N 2 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 925.49092 Q9HD45 Q9HD45 118 125 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 0.0019165 158.12 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 3306900 3306900 0 2121 2568 2188 5331;5332;5333;5334;5335;5336;5337;5338 3865;3866 3865 2 111220 0 DAGEGGLSLAIEGPSK HGVVNKPATFTVNTKDAGEGGLSLAIEGPS AGEGGLSLAIEGPSKAEISCTDNQDGTCSV K D A S K A 2 0 0 1 0 0 2 4 0 1 2 1 0 0 1 2 0 0 0 0 0 0 16 0 1499.7468 P21333 P21333 1892 1907 FLNA Filamin-A yes yes 2 1.7165E-14 197.36 By MS/MS 2.5 0.5 1 1 2 1456200 1456200 0 2122 648 2189 5339;5340 3867 3867 1 62701 0 DAGEGLLAVQITDPEGKPK GVPASLPVEFTIDAKDAGEGLLAVQITDPE GLLAVQITDPEGKPKKTHIQDNHDGTYTVA K D A P K K 2 0 0 2 0 1 2 3 0 1 2 2 0 0 2 0 1 0 0 1 0 0 19 1 1937.0106 P21333 P21333 1574 1592 FLNA Filamin-A yes yes 2;3 4.4487E-07 154.65 By MS/MS 2.33 0.471 2 1 3 957070 957070 0 2123 648 2190 5341;5342;5343 3868;3869 3869 2 42515 0 DAGIEPGPDTYLALLNAYAEK AGDMENAENILTVMRDAGIEPGPDTYLALL GPDTYLALLNAYAEKGDIDHVKQTLEKVEK R D A E K G 4 0 1 2 0 0 2 2 0 1 3 1 0 0 2 0 1 0 2 0 0 0 21 0 2220.095 P42704 P42704 260 280 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0009223 95.751 By MS/MS 6 0 1 1 235390 235390 0 2124 854 2191 5344 3870 3870 1 1835.6 0 DAGQISGLNVLR TVPAYFNDSQRQATKDAGQISGLNVLRVIN ATKDAGQISGLNVLRVINEPTAAALAYGLD K D A L R V 1 1 1 1 0 1 0 2 0 1 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1241.6728 P38646 P38646 207 218 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.0701E-43 276 By MS/MS By MS/MS 5.08 2.25 1 1 1 1 3 2 1 1 1 10 2 87005000 86398000 607420 2125 820 2192 5345;5346;5347;5348;5349;5350;5351;5352;5353;5354;5355;5356 3871;3872;3873;3874;3875;3876;3877;3878;3879;3880 3876 10 3632900 1801300 DAGSGLVTR EPEDPVTERSAFTERDAGSGLVTRLRERPA SAFTERDAGSGLVTRLRERPALLVSSTSWT R D A T R L 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 874.45084 Q9BT22 Q9BT22 264 272 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 0.00028226 158.76 By MS/MS 4.67 2.62 1 1 1 3 4126300 4126300 0 2126 2344 2193 5357;5358;5359 3881;3882 3882 2 66648 0 DAGTIAGLNVLR TVPAYFNDSQRQATKDAGTIAGLNVLRIIN ATKDAGTIAGLNVLRIINEPTAAAIAYGLD K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 P11142 P11142 160 171 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 5.295E-33 260.76 By MS/MS By MS/MS 5.38 2.53 1 1 1 1 4 1 1 1 1 1 12 1 136730000 136500000 229910 2127 546 2194 5360;5361;5362;5363;5364;5365;5366;5367;5368;5369;5370;5371;5372 3883;3884;3885;3886;3887;3888;3889;3890;3891;3892;3893;3894 3891 12 5846800 680290 DAGTIAGLNVMR TVPAYFNDAQRQATKDAGTIAGLNVMRIIN ATKDAGTIAGLNVMRIINEPTAAAIAYGLD K D A M R I 2 1 1 1 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 1 0 0 12 0 1216.6234 P11021 P11021 186 197 HSPA5 78 kDa glucose-regulated protein yes yes 2 5.8964E-24 237.51 By MS/MS By MS/MS 5.25 0.433 3 1 3 1 22689000 22437000 251830 2128 545 2195;2196 5373;5374;5375;5376 3895;3896;3897 3896 331 3 898920 745170 DAGVIAGLNVLR TVPAYFNDSQRQATKDAGVIAGLNVLRIIN ATKDAGVIAGLNVLRIINEPTAAAIAYGLD K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1196.6877 P0DMV9;P0DMV8 P0DMV9 160 171 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 3.024E-24 246.93 By MS/MS 5.8 2.64 1 1 1 2 1 1 1 1 1 10 39620000 39620000 0 2129 528 2197 5377;5378;5379;5380;5381;5382;5383;5384;5385;5386 3898;3899;3900;3901;3902;3903;3904;3905 3900 8 1653200 0 DAHLLVESK IRNLLESYHVPELIKDAHLLVESKNLDFQK VPELIKDAHLLVESKNLDFQKTVQLTSSEL K D A S K N 1 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 9 0 1010.5397 P42704 P42704 641 649 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.00074929 133.57 By MS/MS By matching 3.25 0.433 3 1 3 1 16178000 16148000 29977 2130 854 2198 5387;5388;5389;5390 3906;3907;3908 3906 3 421550 42964 DAHNALLDIQSSGR MVQLGICAFRQGLTKDAHNALLDIQSSGRA KDAHNALLDIQSSGRAKELLGQGLLLRSLQ K D A G R A 2 1 1 2 0 1 0 1 1 1 2 0 0 0 0 2 0 0 0 0 0 0 14 0 1495.7379 Q99613;B5ME19 Q99613 628 641 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 3.6142E-08 188.48 By MS/MS By MS/MS 4.42 1.89 1 1 1 4 2 1 1 1 10 2 35142000 34783000 358500 2131 2275 2199 5391;5392;5393;5394;5395;5396;5397;5398;5399;5400;5401;5402 3909;3910;3911;3912;3913;3914 3912 6 978630 749120 DAHQSLLATR VRNHPGLLLMDTTFRDAHQSLLATRVRTHD DTTFRDAHQSLLATRVRTHDLKKIAPYVAH R D A T R V 2 1 0 1 0 1 0 0 1 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1110.5782 P11498 P11498 572 581 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.00060702 140.78 By MS/MS 4 0.816 1 1 1 3 1870200 1870200 0 2132 555 2200 5403;5404;5405 3915 3915 1 54584 0 DAHSNLLAK SWLKSLFVRKVDPRKDAHSNLLAKKETSNL KVDPRKDAHSNLLAKKETSNLYKLQFHNVK K D A A K K 2 0 1 1 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 967.50869 O75323 O75323 59 67 GBAS Protein NipSnap homolog 2 yes yes 2;3 0.0085538 99.136 By MS/MS 8 0 2 2 4376200 4376200 0 2133 296 2201 5406;5407 3916;3917 3917 2 288690 0 DAHSTLLSK SWFRSLFVHKVDPRKDAHSTLLSKKETSNL KVDPRKDAHSTLLSKKETSNLYKIQFHNVK K D A S K K 1 0 0 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 970.50836 Q9BPW8 Q9BPW8 57 65 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2;3 0.0012339 138.06 By MS/MS 8.25 0.433 3 1 4 6626600 6626600 0 2134 2301 2202 5408;5409;5410;5411 3918;3919;3920 3919 3 493160 0 DAIAALGLLQK LRSLLEVVVLSRNSRDAIAALGLLQKAVEG RNSRDAIAALGLLQKAVEGLLDATSGADAD R D A Q K A 3 0 0 1 0 1 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1111.6601 A5YKK6 A5YKK6 1654 1664 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00031269 150.36 By MS/MS 3 0.816 1 1 1 3 587110 587110 0 2135 19 2203 5412;5413;5414 3921;3922 3922 2 20437 0 DAIKENPEFDLHFEK QIAWALRDLAVVDAKDAIKENPEFDLHFEK DAIKENPEFDLHFEKIYKWVASSTAEKNAF K D A E K I 1 0 1 2 0 0 3 0 1 1 1 2 0 2 1 0 0 0 0 0 0 0 15 1 1830.8788 Q9NV70 Q9NV70 82 96 EXOC1 Exocyst complex component 1 yes yes 3 0.0061024 87.647 By MS/MS 4 0 1 1 1410200 1410200 0 2136 2645 2204 5415 3923 3923 1 38498 0 DAINQGMDEELER RFHWTAPAALQVTVRDAINQGMDEELERDE VRDAINQGMDEELERDEKVFLLGEEVAQYD R D A E R D 1 1 1 2 0 1 3 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 13 0 1518.662 P11177 P11177 37 49 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 5.8899E-12 207.47 By MS/MS By matching 7.33 0.471 2 1 2 1 1713900 1686800 27109 2137 549 2205 5416;5417;5418 3924 3924 1 76706 111290 DAINQGMDEELERDEK RFHWTAPAALQVTVRDAINQGMDEELERDE AINQGMDEELERDEKVFLLGEEVAQYDGAY R D A E K V 1 1 1 3 0 1 4 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 16 1 1890.8265 P11177 P11177 37 52 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2;3 4.2151E-38 265.77 By MS/MS 8.17 1.07 2 2 1 1 6 30698000 30698000 0 2138 549 2206 5419;5420;5421;5422;5423;5424 3925;3926;3927 3927 3 1444400 0 DALKTEFK LSYIRYSQICAKAVRDALKTEFKANAEKTS ICAKAVRDALKTEFKANAEKTSGSNVKIVK R D A F K A 1 0 0 1 0 0 1 0 0 0 1 2 0 1 0 0 1 0 0 0 0 0 8 1 950.5073 P56381;Q5VTU8 P56381 25 32 ATP5E;ATP5EP2 ATP synthase subunit epsilon, mitochondrial;ATP synthase subunit epsilon-like protein, mitochondrial yes no 2 0.021766 139.97 By MS/MS By matching 10 0 2 1 1 2514500 2463400 51169 2139 1045 2207 5425;5426 3928 3928 1 2618300 1312500 DALKTEFKANAEK LSYIRYSQICAKAVRDALKTEFKANAEKTS VRDALKTEFKANAEKTSGSNVKIVKVKKE_ R D A E K T 3 0 1 1 0 0 2 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 13 2 1463.762 P56381 P56381 25 37 ATP5E ATP synthase subunit epsilon, mitochondrial yes yes 3 0.0045268 99.844 By MS/MS 10 0 1 1 444200 444200 0 2140 1045 2208 5427 3929 3929 1 472130 0 DALLLIFANK AHSELAKLLTEKELRDALLLIFANKQDVAG EKELRDALLLIFANKQDVAGALSVEEITEL R D A N K Q 2 0 1 1 0 0 0 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 10 0 1116.6543 P36406 P36406 505 514 TRIM23 E3 ubiquitin-protein ligase TRIM23 yes yes 2 0.00081963 131.22 By MS/MS 9.5 0.5 1 1 2 378180 378180 0 2141 803 2209 5428;5429 3930 3930 1 353730 0 DALNLAQMQEQTLQLEQQSK AAKAARELEHSRYAKDALNLAQMQEQTLQL AQMQEQTLQLEQQSKLKMRLEALSLLHTLV K D A S K L 2 0 1 1 0 6 2 0 0 0 4 1 1 0 0 1 1 0 0 0 0 0 20 0 2315.1427 Q9NVI7 Q9NVI7 73 92 ATAD3A ATPase family AAA domain-containing protein 3A no no 2 1.2798E-24 207.85 By MS/MS 5.5 0.5 1 1 2 1925600 1925600 0 2142 2655 2210 5430;5431 3931 3931 1 18118 0 DALPELLGLEAGSR RRRATVVVGDLHPLRDALPELLGLEAGSRR RDALPELLGLEAGSRRQARSRESNKPRPSE R D A S R R 2 1 0 1 0 0 2 2 0 0 4 0 0 0 1 1 0 0 0 0 0 0 14 0 1439.762 Q9NSI2 Q9NSI2 149 162 FAM207A Protein FAM207A yes yes 2 0.0066071 113.61 By MS/MS 8 0 1 1 224870 224870 0 2143 2625 2211 5432 3932 3932 1 14835 0 DALQGFK AFVEFENDGQAGAARDALQGFKITPSHAMK DGQAGAARDALQGFKITPSHAMKITYAKK_ R D A F K I 1 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 777.4021 P08579 P08579 205 211 SNRPB2 U2 small nuclear ribonucleoprotein B no no 2 0.029271 115.46 By MS/MS 8 0 1 1 1303200 1303200 0 2144 506 2212 5433 3933 3933 1 85972 0 DALRPPLQNINSVQLK DEAKLIAVEIYRWIRDALRPPLQNINSVQL ALRPPLQNINSVQLKELEEEWVKLPTSAPR R D A L K E 1 1 2 1 0 2 0 0 0 1 3 1 0 0 2 1 0 0 0 1 0 0 16 1 1805.0159 Q14008 Q14008 197 212 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.029917 80.488 By MS/MS 3 0.816 1 1 1 3 495540 495540 0 2145 1405 2213 5434;5435;5436 3934 3934 1 19712 0 DALSDLALHFLNK KTGCNVLLIQKSILRDALSDLALHFLNKMK LRDALSDLALHFLNKMKIMVIKDIEREDIE R D A N K M 2 0 1 2 0 0 0 0 1 0 4 1 0 1 0 1 0 0 0 0 0 0 13 0 1455.7722 P50991 P50991 307 319 CCT4 T-complex protein 1 subunit delta yes yes 2;3 1.388E-17 219.72 By MS/MS 5.75 0.433 1 3 4 142660000 142660000 0 2146 956 2214 5437;5438;5439;5440 3935;3936;3937;3938;3939;3940 3936 6 1113700 0 DALSDLALHFLNKMK KTGCNVLLIQKSILRDALSDLALHFLNKMK DALSDLALHFLNKMKIMVIKDIEREDIEFI R D A M K I 2 0 1 2 0 0 0 0 1 0 4 2 1 1 0 1 0 0 0 0 0 0 15 1 1714.9076 P50991 P50991 307 321 CCT4 T-complex protein 1 subunit delta yes yes 3 0.034255 61.11 By MS/MS 6 0 1 1 640610 640610 0 2147 956 2215 5441 3941 3941 713 1 4995.5 0 DALSLEEILR PREPGAAGGAAGGSRDALSLEEILRLYNQP AGGSRDALSLEEILRLYNQPINEEQAWAVC R D A L R L 1 1 0 1 0 0 2 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1157.6292 Q08AE8 Q08AE8 38 47 SPIRE1 Protein spire homolog 1 yes yes 2 0.0043235 109.66 By MS/MS 4 0 1 1 66122 66122 0 2148 1293 2216 5442 3942 3942 1 1805.1 0 DANGNSFATR NRERHPGSFDVVHVKDANGNSFATRLSNIF VVHVKDANGNSFATRLSNIFVIGKGNKPWI K D A T R L 2 1 2 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 10 0 1051.4683 P62701;Q8TD47;P22090 P62701 212 221 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.00033934 157.38 By MS/MS 8 0 1 1 5192300 5192300 0 2149 1140 2217 5443 3943 3943 1 342530 0 DAQAGKEPGGSR RFEMFRELNEALELKDAQAGKEPGGSRAHS ELKDAQAGKEPGGSRAHSSHLKSKKGQSTS K D A S R A 2 1 0 1 0 1 1 3 0 0 0 1 0 0 1 1 0 0 0 0 0 0 12 1 1171.5582 P04637 P04637 352 363 TP53 Cellular tumor antigen p53 yes yes 2 0.020584 117.14 By MS/MS 6 0 1 1 836130 836130 0 2150 455 2218 5444 3944 3944 1 6520.1 0 DAQPSFSAEDIAK FRTVLIACNVKQMSKDAQPSFSAEDIAKIK SKDAQPSFSAEDIAKIKKFSKTRSKDIFDQ K D A A K I 3 0 0 2 0 1 1 0 0 1 0 1 0 1 1 2 0 0 0 0 0 0 13 0 1377.6412 P25205 P25205 271 283 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.012264 92.295 By MS/MS By matching 4.33 0.471 2 1 2 1 4324300 4302600 21745 2151 683 2219 5445;5446;5447 3945 3945 1 121910 45437 DAQQSSSPAADNLR VKINQNLHRLQVAWRDAQQSSSPAADNLRE RDAQQSSSPAADNLREQFERLMTIYLSTKT R D A L R E 3 1 1 2 0 2 0 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 14 0 1458.6699 Q14139 Q14139 545 558 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 4.91E-12 201 By MS/MS 4 0 1 1 709050 709050 0 2152 1408 2220 5448 3946 3946 1 19356 0 DAQQVEPEGQEKPSPATVR GPIGKERSLKNRKVKDAQQVEPEGQEKPSP VEPEGQEKPSPATVRSTDPVTTKETKAVSE K D A V R S 2 1 0 1 0 3 3 1 0 0 0 1 0 0 3 1 1 0 0 2 0 0 19 1 2065.0076 Q9Y520 Q9Y520 2130 2148 PRRC2C Protein PRRC2C yes yes 3 0.0015513 93.226 By MS/MS 1 0 1 1 649690 649690 0 2153 2963 2221 5449 3947 3947 1 31743 0 DASLMVTNDGATILK LGPKGMDKILLSSGRDASLMVTNDGATILK DASLMVTNDGATILKNIGVDNPAAKVLVDM R D A L K N 2 0 1 2 0 0 0 1 0 1 2 1 1 0 0 1 2 0 0 1 0 0 15 0 1547.7865 P78371 P78371 58 72 CCT2 T-complex protein 1 subunit beta yes yes 2 3.7613E-63 300.27 By MS/MS By MS/MS 7.82 1.47 3 2 2 2 2 10 1 62010000 61916000 94616 2154 1195 2222;2223 5450;5451;5452;5453;5454;5455;5456;5457;5458;5459;5460 3948;3949;3950;3951;3952;3953 3953 943 6 1559100 290180 DASLMVTNDGATILKNIGVDNPAAK LGPKGMDKILLSSGRDASLMVTNDGATILK ATILKNIGVDNPAAKVLVDMSRVQDDEVGD R D A A K V 4 0 3 3 0 0 0 2 0 2 2 2 1 0 1 1 2 0 0 2 0 0 25 1 2527.2952 P78371 P78371 58 82 CCT2 T-complex protein 1 subunit beta yes yes 3 0.0013191 65.213 By MS/MS 6.5 0.5 1 1 2 2208400 2208400 0 2155 1195 2224 5461;5462 3954 3954 943 1 18168 0 DASQTTLLDLDALAR YFWLLCKLVDNIHIKDASQTTLLDLDALAR DASQTTLLDLDALARHLADCIRSREILDHQ K D A A R H 3 1 0 3 0 1 0 0 0 0 4 0 0 0 0 1 2 0 0 0 0 0 15 0 1601.8261 Q70CQ2 Q70CQ2 1749 1763 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 2 0.0031913 110.98 By MS/MS 2 0.816 1 1 1 3 149030 149030 0 2156 1751 2225 5463;5464;5465 3955 3955 1 6257.7 0 DASSSTFPTLTR EIAGVGVPELINSPKDASSSTFPTLTRHTF SPKDASSSTFPTLTRHTFVVFFRVMMAELE K D A T R H 1 1 0 1 0 0 0 0 0 0 1 0 0 1 1 3 3 0 0 0 0 0 12 0 1281.6201 Q9BXW9 Q9BXW9 1217 1228 FANCD2 Fanconi anemia group D2 protein yes yes 2 0.0003533 145.46 By MS/MS 3 0 1 1 1056700 1056700 0 2157 2405 2226 5466 3956 3956 1 27585 0 DASTLGLSQIK AEVASAVCLRLHRPRDASTLGLSQIKLLGL HRPRDASTLGLSQIKLLGLTAFGTTSSATV R D A I K L 1 0 0 1 0 1 0 1 0 1 2 1 0 0 0 2 1 0 0 0 0 0 11 0 1131.6136 Q9NR09 Q9NR09 3287 3297 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.0010811 140.49 By MS/MS 1 0 1 1 637190 637190 0 2158 2596 2227 5467 3957 3957 1 31132 0 DASVPLIDVTNLPTPR VQRNKEKGKISSLVKDASVPLIDVTNLPTP ASVPLIDVTNLPTPRKFLDTSHYSTAGSSS K D A P R K 1 1 1 2 0 0 0 0 0 1 2 0 0 0 3 1 2 0 0 2 0 0 16 0 1706.9203 Q96A65 Q96A65 224 239 EXOC4 Exocyst complex component 4 yes yes 2 1.7967E-07 164.13 By MS/MS 4.5 0.5 1 1 2 2634800 2634800 0 2159 2118 2228 5468;5469 3958 3958 1 72559 0 DATGAEEEAPWAATER PVPPPGAQGVAELLRDATGAEEEAPWAATE ATGAEEEAPWAATERRMPGQCSVLLFPGQG R D A E R R 5 1 0 1 0 0 4 1 0 0 0 0 0 0 1 0 2 1 0 0 0 0 16 0 1702.7435 Q8IVS2 Q8IVS2 41 56 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 7.2973E-29 240.65 By MS/MS By matching 7.75 0.829 2 1 1 3 1 3572800 3556800 16064 2160 1858 2229 5470;5471;5472;5473 3959 3959 1 115760 65944 DATLTALDR IAQVSVDKGLKTILKDATLTALDRGQQQVF LKTILKDATLTALDRGQQQVFKGLNDKVKK K D A D R G 2 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 9 0 974.50327 P40939 P40939 391 399 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 1.8728E-05 175.91 By MS/MS 5 0 1 1 5094100 5094100 0 2161 835 2230 5474 3960;3961 3960 2 209390 0 DATLTALDRGQQQVFK IAQVSVDKGLKTILKDATLTALDRGQQQVF ATLTALDRGQQQVFKGLNDKVKKKALTSFE K D A F K G 2 1 0 2 0 3 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 16 1 1789.9323 P40939 P40939 391 406 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 2.5889E-14 210.93 By MS/MS 5 0 1 1 2702900 2702900 0 2162 835 2231 5475 3962 3962 1 111100 0 DATNVAAAFEEAVR CRDNGDYPYFETSAKDATNVAAAFEEAVRR KDATNVAAAFEEAVRRVLATEDRSDHLIQT K D A V R R 5 1 1 1 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 14 0 1462.7052 P51151 P51151 157 170 RAB9A Ras-related protein Rab-9A yes yes 2 1.6656E-46 282.21 By MS/MS 9.5 0.5 1 1 2 1863900 1863900 0 2163 961 2232 5476;5477 3963;3964;3965 3963 3 1088800 0 DATNVAAAFEEAVRR CRDNGDYPYFETSAKDATNVAAAFEEAVRR DATNVAAAFEEAVRRVLATEDRSDHLIQTD K D A R R V 5 2 1 1 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 15 1 1618.8063 P51151 P51151 157 171 RAB9A Ras-related protein Rab-9A yes yes 2 0.0018828 124.12 By MS/MS 9 0 1 1 420890 420890 0 2164 961 2233 5478 3966 3966 1 241550 0 DATNVEESFTILTR LSADCGMKYIETSAKDATNVEESFTILTRD KDATNVEESFTILTRDIYELIKKGEICIQD K D A T R D 1 1 1 1 0 0 2 0 0 1 1 0 0 1 0 1 3 0 0 1 0 0 14 0 1594.7839 Q14964 Q14964 160 173 RAB39A Ras-related protein Rab-39A yes yes 2 4.0204E-122 366.59 By MS/MS 9 0 1 1 1352500 1352500 0 2165 1451 2234 5479 3967 3967 1 776190 0 DATNVGDEGGFAPNILENK VYHNLKNVIKEKYGKDATNVGDEGGFAPNI VGDEGGFAPNILENKEGLELLKTAIGKAGY K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2 3.2102E-26 228.11 By MS/MS 7 0.816 1 1 1 3 3238300 3238300 0 2166 482 2235 5480;5481;5482 3968 3968 1 43703 0 DATNVGDEGGFAPNILENKEGLELLK VYHNLKNVIKEKYGKDATNVGDEGGFAPNI APNILENKEGLELLKTAIGKAGYTDKVVIG K D A L K T 2 0 3 2 0 0 4 4 0 1 4 2 0 1 1 0 1 0 0 1 0 0 26 1 2742.3712 P06733 P06733 203 228 ENO1 Alpha-enolase yes yes 2;3 1.0019E-11 130.17 By MS/MS 6 0 2 2 15504000 15504000 0 2167 482 2236 5483;5484 3969;3970 3969 2 120900 0 DATSRPTDNILIPQLIR MVLAGASEFDPQYNKDATSRPTDNILIPQL TSRPTDNILIPQLIREIGSINLKKNEPPLT K D A I R E 1 2 1 2 0 1 0 0 0 3 2 0 0 0 2 1 2 0 0 0 0 0 17 1 1922.0585 Q9UGP8 Q9UGP8 263 279 SEC63 Translocation protein SEC63 homolog yes yes 3 0.0054969 86.772 By MS/MS 4.5 0.5 1 1 2 594880 594880 0 2168 2775 2237 5485;5486 3971 3971 1 17036 0 DATYTSAR TAAYVEMRREAWASKDATYTSARTLLAILR REAWASKDATYTSARTLLAILRLSTALARL K D A A R T 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2 0 1 0 0 0 8 0 883.40356 P33993 P33993 597 604 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.014788 113.5 By MS/MS 5.5 0.5 1 1 2 2465000 2465000 0 2169 775 2238 5487;5488 3972 3972 1 81111 0 DAVDFDVR TSKKEDAENLAAAQRDAVDFDVRVDTQDQG NLAAAQRDAVDFDVRVDTQDQGMYRFLTSQ R D A V R V 1 1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 935.43486 Q9Y6D6 Q9Y6D6 1655 1662 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.051613 90.709 By MS/MS 2.5 0.5 1 1 2 481520 481520 0 2170 3003 2239 5489;5490 3973 3973 1 21620 0 DAVIEFLLDK RRPIVACELGRLYNKDAVIEFLLDKSAEKA RLYNKDAVIEFLLDKSAEKALGKAASHIKS K D A D K S 1 0 0 2 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 1 0 0 10 0 1161.6281 Q9BY42 Q9BY42 60 69 RTFDC1 Protein RTF2 homolog yes yes 2 0.034916 88.496 By MS/MS 8 0 1 1 0 0 0 2171 2407 2240 5491 3974 3974 1 0 0 DAVITVPVFFNQAER YSRSLAEDFAEQPIKDAVITVPVFFNQAER DAVITVPVFFNQAERRAVLQAARMAGLKVL K D A E R R 2 1 1 1 0 1 1 0 0 1 0 0 0 2 1 0 1 0 0 3 0 0 15 0 1704.8835 Q9Y4L1 Q9Y4L1 171 185 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.040588 90.614 By MS/MS 3 0 1 1 103100 103100 0 2172 2955 2241 5492 3975 3975 1 2691.4 0 DAVLLLFANK VADELQKMLLVDELRDAVLLLFANKQDLPN VDELRDAVLLLFANKQDLPNAMAISEMTDK R D A N K Q 2 0 1 1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 10 0 1102.6386 P18085 P18085 118 127 ARF4 ADP-ribosylation factor 4 yes yes 2 0.00089422 146.81 By MS/MS 9.5 0.5 1 1 2 746220 746220 0 2173 621 2242 5493;5494 3976;3977 3976 2 541110 0 DAVLLVFANK AREELMRMLAEDELRDAVLLVFANKQDLPN EDELRDAVLLVFANKQDLPNAMNAAEITDK R D A N K Q 2 0 1 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 10 0 1088.623 P84077;P61204;P84085 P84077 118 127 ARF1;ARF3;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5 no no 2 1.0757E-10 206.09 By MS/MS 9.5 0.5 1 1 2 3179500 3179500 0 2174 1093;1215 2243 5495;5496 3978;3979 3978 2 2265400 0 DAVPAFIEPNVR EQEEETQPGRLLGRRDAVPAFIEPNVRFWI GRRDAVPAFIEPNVRFWITERQSFIRRFLQ R D A V R F 2 1 1 1 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 2 0 0 12 0 1326.6932 Q6P4A7 Q6P4A7 19 30 SFXN4 Sideroflexin-4 yes yes 2 0.053296 73.499 By MS/MS 1.5 0.5 1 1 2 562050 562050 0 2175 1709 2244 5497;5498 3980 3980 1 27541 0 DAVQLNVIATR IFHCAATVRFNENLRDAVQLNVIATRQLIL ENLRDAVQLNVIATRQLILLAQQMKNLEVF R D A T R Q 2 1 1 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1198.667 Q8WVX9 Q8WVX9 123 133 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 9.5769E-12 213.35 By MS/MS 6 0 1 1 6686800 6686800 0 2176 2036 2245 5499 3981 3981 1 52144 0 DAVSGMGVIVHIIEK LFETISQAMLNAVDRDAVSGMGVIVHIIEK DAVSGMGVIVHIIEKDKITTRTLKARMD__ R D A E K D 1 0 0 1 0 0 1 2 1 3 0 1 1 0 0 1 0 0 0 3 0 0 15 0 1566.844 P49720 P49720 178 192 PSMB3 Proteasome subunit beta type-3 yes yes 2 6.566E-06 148.68 By MS/MS 9 0 1 1 388100 388100 0 2177 926 2246 5500 3982 3982 689 1 222730 0 DAVSPFSFSLLK CLALILSTMKPFPPKDAVSPFSFSLLKNCS PPKDAVSPFSFSLLKNCSIAAAKTVGGCGA K D A L K N 1 0 0 1 0 0 0 0 0 0 2 1 0 2 1 3 0 0 0 1 0 0 12 0 1309.6918 Q8NB46 Q8NB46 1025 1036 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 2 0.028807 80.916 By MS/MS 4 0 1 1 83532 83532 0 2178 1938 2247 5501 3983 3983 1 2280.3 0 DAVSREIR FVKQLLLYLTSKSEKDAVSREIRLKRFLHV LTSKSEKDAVSREIRLKRFLHVFFSSPLPG K D A I R L 1 2 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 8 1 944.50394 Q14669 Q14669 1178 1185 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 3 0.038218 71.379 By MS/MS 5 0 1 1 0 0 0 2179 1437 2248 5502 3984 3984 1 0 0 DAVVYPILVEFTR AALSKAFKVKPFVVRDAVVYPILVEFTREV VRDAVVYPILVEFTREVEEEPGIHSLKHNK R D A T R E 1 1 0 1 0 0 1 0 0 1 1 0 0 1 1 0 1 0 1 3 0 0 13 0 1520.8239 Q9Y4L1 Q9Y4L1 439 451 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.050647 71.889 By MS/MS 3.5 0.5 1 1 2 274520 274520 0 2180 2955 2249 5503;5504 3985 3985 1 7207.1 0 DAYSGGAVNLYHVR AYDLARRAIYQATYRDAYSGGAVNLYHVRE RDAYSGGAVNLYHVREDGWIRVSSDNVADL R D A V R E 2 1 1 1 0 0 0 2 1 0 1 0 0 0 0 1 0 0 2 2 0 0 14 0 1520.7372 P28074 P28074 226 239 PSMB5 Proteasome subunit beta type-5 yes yes 2 4.1542E-08 187.42 By MS/MS 9 0.816 1 1 1 3 3495000 3495000 0 2181 715 2250 5505;5506;5507 3986 3986 1 2007700 0 DAYVQALAR CAIRIACIFSIQLERDAYVQALARFTLLTV SIQLERDAYVQALARFTLLTVSSGITEMKQ R D A A R F 3 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1005.5243 Q9Y6D6;Q9Y6D5 Q9Y6D6 997 1005 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.0016822 133.23 By MS/MS 2.5 0.5 1 1 2 583150 583150 0 2182 3003;3002 2251 5508;5509 3987 3987 1 23921 0 DCAVIVTQK AINQGGLTSVAVRGKDCAVIVTQKKVPDKL VAVRGKDCAVIVTQKKVPDKLLDSSTVTHL K D C Q K K 1 0 0 1 1 1 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 9 0 1032.5274 P60900 P60900 46 54 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.033601 89.047 By MS/MS 8 0 1 1 547050 547050 0 2183 1077 2252 5510 3988 3988 1 36088 0 DCDHADEQKCYSCGEFGHIQK EQCCYNCGKPGHLARDCDHADEQKCYSCGE EQKCYSCGEFGHIQKDCTKVKCYRCGETGH R D C Q K D 1 0 0 3 3 2 2 2 2 1 0 2 0 1 0 1 0 0 1 0 0 0 21 1 2583.0213 P62633 P62633 110 130 CNBP Cellular nucleic acid-binding protein yes yes 4 0.0055903 57.009 By MS/MS 9.5 0.5 1 1 2 540760 540760 0 2184 1138 2253 5511;5512 3989 3989 1 345490 0 DCDLQEDACYNCGR PDICYRCGESGHLAKDCDLQEDACYNCGRG KDCDLQEDACYNCGRGGHIAKDCKEPKRER K D C G R G 1 1 1 3 3 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 14 0 1774.6345 P62633 P62633 66 79 CNBP Cellular nucleic acid-binding protein yes yes 2 4.1895E-122 365.88 By MS/MS 9.5 0.5 1 1 2 3599300 3599300 0 2185 1138 2254 5513;5514 3990;3991 3991 2 2416300 0 DCEDPNPLIR SQPDMAIMAVNTFVKDCEDPNPLIRALAVR NTFVKDCEDPNPLIRALAVRTMGCIRVDKI K D C I R A 0 1 1 2 1 0 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 10 0 1227.5554 P63010;Q10567 Q10567 94 103 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 0.00024197 155.07 By MS/MS 4 0 1 1 1622800 1622800 0 2186 1300;1167 2255 5515 3992 3992 1 44300 0 DCEECIQLEPTFIK AACYTKLLEFQLALKDCEECIQLEPTFIKG KDCEECIQLEPTFIKGYTRKAAALEAMKDY K D C I K G 0 0 0 1 2 1 3 0 0 2 1 1 0 1 1 0 1 0 0 0 0 0 14 0 1780.8012 P31948 P31948 416 429 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.00080353 155.86 By MS/MS 5 0 1 1 479380 479380 0 2187 762 2256 5516 3993 3993 1 19704 0 DCFTCSNCK AGDQNVEYKGTVWHKDCFTCSNCKQVIGTG GTVWHKDCFTCSNCKQVIGTGSFFPKGEDF K D C C K Q 0 0 1 1 3 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 9 0 1190.4155 Q13642 Q13642 125 133 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.0010268 141.52 By MS/MS 8 0 1 1 599190 599190 0 2188 1394 2257 5517 3994 3994 1 39528 0 DCGEYAHTR SRNRQFSYLIENMARDCGEYAHTRYFRGGM IENMARDCGEYAHTRYFRGGMLTNARLLFG R D C T R Y 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1107.4404 Q9Y399 Q9Y399 161 169 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.00063318 150.36 By MS/MS 8 0 1 1 1634500 1634500 0 2189 2920 2258 5518 3995 3995 1 107830 0 DCGGAAQLAGPAAEADPLGR ______________________________ AQLAGPAAEADPLGRFTCPVCLEVYEKPVQ R D C G R F 6 1 0 2 1 1 1 4 0 0 2 0 0 0 2 0 0 0 0 0 0 0 20 0 1895.8796 Q9Y508 Q9Y508 7 26 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 2 3.2564E-24 197.73 By MS/MS 9 0 1 1 878140 878140 0 2190 2961 2259 5519 3996 3996 1 503970 0 DCGSVSTVDEFPEAR KGELDLSLENLDLSKDCGSVSTVDEFPEAR DCGSVSTVDEFPEARGEHVHSLPEASVSSK K D C A R G 1 1 0 2 1 0 2 1 0 0 0 0 0 1 1 2 1 0 0 2 0 0 15 0 1667.7097 Q01804 Q01804 902 916 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0091375 95.417 By matching By MS/MS 3 0 2 1 1 261320 206690 54627 2191 1245 2260 5520;5521 3997;3998 3998 2 5395.6 78292 DCLFRPLNK KGIYEIYSLALVTWRDCLFRPLNKQVTNAV ALVTWRDCLFRPLNKQVTNAVLKLIEKERN R D C N K Q 0 1 1 1 1 0 0 0 0 0 2 1 0 1 1 0 0 0 0 0 0 0 9 1 1161.5965 Q13616 Q13616 169 177 CUL1 Cullin-1 yes yes 2 0.024906 119.27 By MS/MS 4.5 0.5 1 1 2 1894200 1894200 0 2192 1387 2261 5522;5523 3999;4000 3999 2 64197 0 DCLINAAK YINENLIVNTDELGRDCLINAAKTSMSSKI NTDELGRDCLINAAKTSMSSKIIGINGDFF R D C A K T 2 0 1 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 903.4484 P17987 P17987 146 153 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.0013764 166.78 By MS/MS By matching 4.17 2.27 1 1 1 2 1 5 1 64479000 64418000 61434 2193 619 2262 5524;5525;5526;5527;5528;5529 4001;4002;4003 4003 3 603900 188410 DCLNVLNK IAQLKVVQTKYVEAKDCLNVLNKSNEGKEL TKYVEAKDCLNVLNKSNEGKELLVPLTSSM K D C N K S 0 0 2 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 974.48552 Q99471 Q99471 48 55 PFDN5 Prefoldin subunit 5 yes yes 2 0.0020889 173.68 By MS/MS 9 0.816 1 1 1 3 4523400 4523400 0 2194 2269 2263 5530;5531;5532 4004 4004 1 1848100 0 DCLSIPYR RHNLEIIKTLVECWKDCLSIPYRLIFEKFS TLVECWKDCLSIPYRLIFEKFSGKDPNSKD K D C Y R L 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 8 0 1022.4855 P78527 P78527 2247 2254 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.024035 111.01 By MS/MS 1.5 0.5 1 1 2 395510 395510 0 2195 1197 2264 5533;5534 4005 4005 1 19498 0 DCPLNAEAASSK WKDIPNENEAQFQIRDCPLNAEAASSKLQS QIRDCPLNAEAASSKLQSSNIFTVAKRNVE R D C S K L 3 0 1 1 1 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 12 0 1261.5609 Q10567 Q10567 865 876 AP1B1 AP-1 complex subunit beta-1 yes yes 2 4.9536E-05 166.11 By MS/MS 4 0 1 1 932880 932880 0 2196 1300 2265 5535 4006 4006 1 25467 0 DCPVPLPGDGDLLVR TRLSPNFREAVTLSRDCPVPLPGDGDLLVR DCPVPLPGDGDLLVRNRFVGVNASDINYSA R D C V R N 0 1 0 3 1 0 0 2 0 0 3 0 0 0 3 0 0 0 0 2 0 0 15 0 1621.8134 Q8N4Q0 Q8N4Q0 54 68 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 2 0.0032038 110.93 By MS/MS 7 0 1 1 7400000 7400000 0 2197 1915 2266 5536 4007 4007 1 132240 0 DCQIAHGAAQFLR GRSRDGGLRFGEMERDCQIAHGAAQFLRER ERDCQIAHGAAQFLRERLFEASDPYQVHVC R D C L R E 3 1 0 1 1 2 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 13 0 1485.7147 P30876 P30876 1092 1104 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2;3 0.01053 103.34 By MS/MS 3 0 2 2 1083600 1083600 0 2198 748 2267 5537;5538 4008;4009 4008 1 28289 0 DCQLNAHK PLVLFCESCDTLTCRDCQLNAHKDHQYQFL CDTLTCRDCQLNAHKDHQYQFLEDAVRNQR R D C H K D 1 0 1 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 984.44471 Q13263 Q13263 231 238 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.038612 95.815 By MS/MS 4 0 1 1 247120 247120 0 2199 1351 2268 5539 4010 4010 1 6746.2 0 DCSGPLSALTELNTK VKFDLEVKALIQDIRDCSGPLSALTELNTK DCSGPLSALTELNTKVKEKFQQLRHRIQDL R D C T K V 1 0 1 1 1 0 1 1 0 0 3 1 0 0 1 2 2 0 0 0 0 0 15 0 1604.7716 Q12981 Q12981 32 46 BNIP1 Vesicle transport protein SEC20 yes yes 2 3.9495E-07 195.72 By MS/MS 7.5 0.5 1 1 2 401470 401470 0 2200 1321 2269 5540;5541 4011 4011 1 20891 0 DDANNDPQWSEEQLIAAK EGYKFYPPKVELFFKDDANNDPQWSEEQLI NNDPQWSEEQLIAAKFCFAGLLIGQTEVDI K D D A K F 3 0 2 3 0 2 2 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 18 0 2042.9181 P22234 P22234 132 149 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 6.9295E-44 264.58 By MS/MS 7 0 1 1 1778600 1778600 0 2201 656 2270 5542 4012 4012 1 31784 0 DDDIAALVVDNGSGMCK ______________________________ DIAALVVDNGSGMCKAGFAGDDAPRAVFPS M D D C K A 2 0 1 4 1 0 0 2 0 1 1 1 1 0 0 1 0 0 0 2 0 0 17 0 1778.7815 P60709 P60709 2 18 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes yes 2 6.5986E-45 269.7 By MS/MS By MS/MS 7.25 0.433 3 1 3 1 3477000 3431100 45887 2202 1072 2271;2272 5543;5544;5545;5546 4013;4014;4015;4016;4017 4015 834 5 63193 188370 DDFLGSFCR INHRFAGQMAALCSRDDFLGSFCRYHLTEP AALCSRDDFLGSFCRYHLTEPGLASRHLLS R D D C R Y 0 1 0 2 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 0 0 0 9 0 1115.4706 Q9NXE4 Q9NXE4 769 777 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 0.00034853 156.75 By MS/MS 5 0 1 1 311700 311700 0 2203 2686 2273 5547 4018 4018 1 12812 0 DDGSWEVIEGYR KPCNHVLSLSFPIRRDDGSWEVIEGYRAQH IRRDDGSWEVIEGYRAQHSQHRTPCKGGIR R D D Y R A 0 1 0 2 0 0 2 2 0 1 0 0 0 0 0 1 0 1 1 1 0 0 12 0 1424.6208 P00367;P49448 P00367 125 136 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 2.3128E-16 215.06 By MS/MS 7 0.816 1 1 1 3 6692300 6692300 0 2204 425 2274 5548;5549;5550 4019 4019 1 67605 0 DDIENMVK REQQIVIQSSGGLSKDDIENMVKNAEKYAE SSGGLSKDDIENMVKNAEKYAEEDRRKKER K D D V K N 0 0 1 2 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 8 0 962.4379 P38646 P38646 556 563 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0053588 135.77 By MS/MS 5 0 1 1 632110 632110 0 2205 820 2275 5551 4020 4020 1 25982 0 DDIIENAPTTHTEEYSGEEK MFWMRVPLVAPEDLRDDIIENAPTTHTEEY NAPTTHTEEYSGEEKTWMWWHNFRTLCDYS R D D E K T 1 0 1 2 0 0 5 1 1 2 0 1 0 0 1 1 3 0 1 0 0 0 20 0 2276.9921 O14744 O14744 165 184 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3 0.0056596 73.984 By MS/MS By MS/MS 5 0 2 1 1 5181200 5036300 144900 2206 125 2276 5552;5553 4021;4022 4022 2 207010 428750 DDKHGSYEDAVHSGALND ILRIDDLIKLHPESKDDKHGSYEDAVHSGA HGSYEDAVHSGALND_______________ K D D N D - 2 0 1 4 0 0 1 2 2 0 1 1 0 0 0 2 0 0 1 1 0 0 18 1 1928.8137 P17987 P17987 539 556 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 7.3374E-33 244.23 By MS/MS By matching 6.8 2.32 1 3 2 2 1 1 9 1 67399000 67367000 31174 2207 619 2277 5554;5555;5556;5557;5558;5559;5560;5561;5562;5563 4023;4024;4025 4025 3 1037900 95609 DDLVTVK SVFSVRFFRTTAVCKDDLVTVKTPAFAESV FRTTAVCKDDLVTVKTPAFAESVTEGDVRW K D D V K T 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 7 0 788.42798 P36957 P36957 68 74 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.012279 147.69 By MS/MS 6 0 1 1 2590300 2590300 0 2208 812 2278 5564 4026 4026 1 20199 0 DDNGIGTAIDFVLSNAR ______________________________ NGIGTAIDFVLSNARLVLGVGGAAMLGIAT K D D A R L 2 1 2 3 0 0 0 2 0 2 1 0 0 1 0 1 1 0 0 1 0 0 17 0 1776.8642 Q9NQG6 Q9NQG6 12 28 MIEF1 Mitochondrial dynamics protein MID51 yes yes 2 9.2969E-07 147.7 By MS/MS 6 0 1 1 179760 179760 0 2209 2589 2279 5565 4027 4027 1 1401.8 0 DDPIISTHLAK ADFEKALTDYRAELRDDPIISTHLAKLYDN AELRDDPIISTHLAKLYDNLLEQNLIRVIE R D D A K L 1 0 0 2 0 0 0 0 1 2 1 1 0 0 1 1 1 0 0 0 0 0 11 0 1208.6401 O00231 O00231 315 325 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.0034112 114.4 By MS/MS 7 0 1 1 780760 780760 0 2210 80 2280 5566 4028 4028 1 13952 0 DDPLTNLNTAFDVAEK HRHRPELIDYGKLRKDDPLTNLNTAFDVAE DPLTNLNTAFDVAEKYLDIPKMLDAEDIVG K D D E K Y 2 0 2 3 0 0 1 0 0 0 2 1 0 1 1 0 2 0 0 1 0 0 16 0 1761.8421 P12814 P12814 199 214 ACTN1 Alpha-actinin-1 yes yes 2 6.9279E-05 137.09 By MS/MS 4 0 1 1 153690 153690 0 2211 568 2281 5567 4029;4030 4029 2 4195.6 0 DDREQFYK NDESGANVDASKMWRDDREQFYKIAKQIVQ DASKMWRDDREQFYKIAKQIVQKSLGL___ R D D Y K I 0 1 0 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 8 1 1099.4934 P60604 P60604 146 153 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 yes yes 3 0.0015322 147.29 By MS/MS 10 0 1 1 341930 341930 0 2212 1070 2282 5568 4031 4031 1 363440 0 DDSNLYINVK PGFTPRLAILQVGNRDDSNLYINVKLKAAE QVGNRDDSNLYINVKLKAAEEIGIKATHIK R D D V K L 0 0 2 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 10 0 1179.5772 P11586 P11586 47 56 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 1.968E-07 193.1 By MS/MS 4.5 0.5 1 1 2 3633500 3633500 0 2213 556 2283 5569;5570 4032 4032 1 103610 0 DDTNVTVAFEEAVR CMENGDYPYLETSAKDDTNVTVAFEEAVRQ KDDTNVTVAFEEAVRQVLAVEEQLEHCMLG K D D V R Q 2 1 1 2 0 0 2 0 0 0 0 0 0 1 0 0 2 0 0 3 0 0 14 0 1564.7369 Q9NP90 Q9NP90 157 170 RAB9B Ras-related protein Rab-9B yes yes 2 0.0044677 106.26 By MS/MS 9 0 1 1 56675 56675 0 2214 2577 2284 5571 4033 4033 1 32526 0 DDVAQTDLLQIDPNFGSK KVKGLVLGPIHKNQKDDVAQTDLLQIDPNF AQTDLLQIDPNFGSKEDFDSLLQSAKKKSI K D D S K E 1 0 1 4 0 2 0 1 0 1 2 1 0 1 1 1 1 0 0 1 0 0 18 0 1974.9535 P08195 P08195 270 287 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 7.1231E-69 296.49 By MS/MS 4.5 0.5 1 1 2 680580 680580 0 2215 499 2285 5572;5573 4034 4034 1 24256 0 DDVFGYPQQFEDKPALSK SGDEKQDNESNVDPRDDVFGYPQQFEDKPA FGYPQQFEDKPALSKTEDRKEYNIGVLRHL R D D S K T 1 0 0 3 0 2 1 1 0 0 1 2 0 2 2 1 0 0 1 1 0 0 18 1 2082.9898 Q93008 Q93008 1615 1632 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.052868 53.255 By MS/MS 2 0.816 1 1 1 3 825410 825410 0 2216 2096 2286 5574;5575;5576 4035 4035 1 31584 0 DDVVTFIDAK ICWSPDGQTIAVGNKDDVVTFIDAKTHRSK AVGNKDDVVTFIDAKTHRSKAEEQFKFEVN K D D A K T 1 0 0 3 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1121.5605 Q96J01 Q96J01 162 171 THOC3 THO complex subunit 3 yes yes 2 0.0015555 118.71 By MS/MS 8 0 1 1 650990 650990 0 2217 2204 2287 5577 4036 4036 1 42946 0 DDYELIDVLVNNAK ASTARWYLLRHLYAKDDYELIDVLVNNAKT KDDYELIDVLVNNAKTHGDTRALELNQRLS K D D A K T 1 0 2 3 0 0 1 0 0 1 2 1 0 0 0 0 0 0 1 2 0 0 14 0 1619.8043 Q6PGP7 Q6PGP7 1534 1547 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00021829 138.25 By MS/MS 3 0 1 1 80913 80913 0 2218 1714 2288 5578 4037;4038 4037 2 2112.3 0 DEAGHFLWPGFGENAR GAQLPRIFHVNWFRRDEAGHFLWPGFGENA EAGHFLWPGFGENARVLDWICRRLEGEDSA R D E A R V 2 1 1 1 0 0 2 3 1 0 1 0 0 2 1 0 0 1 0 0 0 0 16 0 1801.8172 Q16822 Q16822 538 553 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 3 0.0126 78.508 By MS/MS 5.5 0.5 1 1 2 2342400 2342400 0 2219 1550 2289 5579;5580 4039 4039 1 28171 0 DEAQVCAIIER QNTDPHSQEYVEHLKDEAQVCAIIERVQRY EHLKDEAQVCAIIERVQRYLEEKGTTEEVC K D E E R V 2 1 0 1 1 1 2 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 11 0 1302.6238 Q99613;B5ME19 Q99613 475 485 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0031907 115.33 By MS/MS 4 0 1 1 1183600 1183600 0 2220 2275 2290 5581 4040 4040 1 32310 0 DEDFKQYVNK CVTYEHLITKPVLGKDEDFKQYVNKNSKHE PVLGKDEDFKQYVNKNSKHEELMLGDPCLK K D E N K N 0 0 1 2 0 1 1 0 0 0 0 2 0 1 0 0 0 0 1 1 0 0 10 1 1284.5986 P07814 P07814 638 647 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00051354 169.09 By MS/MS 3 0 1 1 875460 875460 0 2221 493 2291 5582 4041 4041 1 22854 0 DEDPLAATR SSVQEECVSTISSSKDEDPLAATREFIEMW TISSSKDEDPLAATREFIEMWRLLGREVPE K D E T R E 2 1 0 2 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 9 0 986.46689 Q7L0Y3 Q7L0Y3 87 95 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.0050027 115.71 By MS/MS By matching 7 0 2 1 1 1778500 1758900 19622 2222 1761 2292 5583;5584 4042 4042 1 31432 80553 DEDVLQK ARQSLRLDPKGKSLKDEDVLQKLPVGTTAT DPKGKSLKDEDVLQKLPVGTTATLYFRDLG K D E Q K L 0 0 0 2 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 845.41306 Q9NZ01 Q9NZ01 61 67 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.021851 121.29 By MS/MS 1.5 0.5 1 1 2 783360 783360 0 2223 2703 2293 5585;5586 4043;4044 4044 2 38475 0 DEEVHAGLGELLR TASQAKAVLSAEQLRDEEVHAGLGELLRSL LRDEEVHAGLGELLRSLSNSTARNVTWKLG R D E L R S 1 1 0 1 0 0 3 2 1 0 3 0 0 0 0 0 0 0 0 1 0 0 13 0 1436.726 P50454 P50454 104 116 SERPINH1 Serpin H1 yes yes 3 0.0015386 113.95 By MS/MS 6.5 0.5 1 1 2 1023600 1023600 0 2224 947 2294 5587;5588 4045 4045 1 14367 0 DEGGKAFFK IMYTGTLDCWRKIARDEGGKAFFKGAWSNV WRKIARDEGGKAFFKGAWSNVLRGMGGAFV R D E F K G 1 0 0 1 0 0 1 2 0 0 0 2 0 2 0 0 0 0 0 0 0 0 9 1 997.4869 P05141;P12236 P05141 264 272 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 0.0063897 145.16 By MS/MS By matching 5.06 2.8 2 2 2 2 2 1 1 3 1 1 16 1 320170000 320060000 104090 2225 469;563 2295 5589;5590;5591;5592;5593;5594;5595;5596;5597;5598;5599;5600;5601;5602;5603;5604;5605 4046;4047;4048;4049;4050;4051 4049 6 23758000 888000 DEGVTSLYK KYPNGFRDVLRELIRDEGVTSLYKGFNAVM LRELIRDEGVTSLYKGFNAVMIRAFPANAA R D E Y K G 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 9 0 1010.492 O43772 O43772 259 267 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.02555 107.29 By MS/MS 8 0 1 1 822250 822250 0 2226 222 2296 5606 4052 4052 1 54244 0 DEIIWLLR GPKALFVFMALSFARDEIIWLLRHADNMPK MALSFARDEIIWLLRHADNMPKKSADDFID R D E L R H 0 1 0 1 0 0 1 0 0 2 2 0 0 0 0 0 0 1 0 0 0 0 8 0 1056.5968 Q9Y2A7 Q9Y2A7 380 387 NCKAP1 Nck-associated protein 1 yes yes 2 0.018258 109.01 By MS/MS 4 0 1 1 142040 142040 0 2227 2882 2297 5607 4053 4053 1 3877.4 0 DEILPTTPISEQK PKKPLPDHVSIVEPKDEILPTTPISEQKGG PKDEILPTTPISEQKGGKPEPPAMPQPVPT K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 P23396 P23396 215 227 RPS3 40S ribosomal protein S3 yes yes 2 0.0019468 120.06 By MS/MS By MS/MS 5.8 3.6 1 1 2 1 4 1 25762000 25070000 692150 2228 668 2298 5608;5609;5610;5611;5612 4054;4055;4056;4057 4055 4 1874200 5904900 DELLQVLR AFRLYDLDKDEKISRDELLQVLRMMVGVNI KDEKISRDELLQVLRMMVGVNISDEQLGSI R D E L R M 0 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 984.5604 Q99653 Q99653 133 140 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.00079654 181.81 By MS/MS 9 0 1 1 454890 454890 0 2229 2281 2299 5613 4058 4058 1 261060 0 DEMVATEQER VVVATGVNTEIGKIRDEMVATEQERTPLQQ IGKIRDEMVATEQERTPLQQKLDEFGEQLS R D E E R T 1 1 0 1 0 1 3 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1206.5187 P16615 P16615 237 246 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.0051751 106.88 By MS/MS 1.5 0.5 1 1 2 253460 253460 0 2230 608 2300 5614;5615 4059 4059 1 12494 0 DENPFASLTATSQPIAAAAR GQILMEVLMMSTQTRDENPFASLTATSQPI ASLTATSQPIAAAARSPDRNLLLNTGSNPG R D E A R S 6 1 1 1 0 1 1 0 0 1 1 0 0 1 2 2 2 0 0 0 0 0 20 0 2030.0069 O95155 O95155 218 237 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 6.0643E-32 230.86 By MS/MS 3.5 0.5 1 1 2 331560 331560 0 2231 367 2301 5616;5617 4060 4060 1 8709.8 0 DENSQLVAIVLR LGGAMENQDIAANYRDENSQLVAIVLRRLR NYRDENSQLVAIVLRRLRELQLQEVALRQE R D E L R R 1 1 1 1 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 2 0 0 12 0 1355.7409 Q9Y4B6 Q9Y4B6 166 177 VPRBP Protein VPRBP yes yes 2 0.00019922 152.69 By MS/MS 3.5 0.5 1 1 2 1226000 1226000 0 2232 2950 2302 5618;5619 4061 4061 1 33235 0 DEPGEGSGVAR ATTPMAVHRVKVTFKDEPGEGSGVARSFYT VTFKDEPGEGSGVARSFYTAIAQAFLSNEK K D E A R S 1 1 0 1 0 0 2 3 0 0 0 0 0 0 1 1 0 0 0 1 0 0 11 0 1072.4785 O95071 O95071 2283 2293 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.040843 79.148 By MS/MS 1.5 0.5 1 1 2 160290 160290 0 2233 364 2303 5620;5621 4062 4062 1 7897.2 0 DEPSVAAMVYPFTGDHK RAVQGMLDFDYVCSRDEPSVAAMVYPFTGD PSVAAMVYPFTGDHKQKFYWGHKEILIPVF R D E H K Q 2 0 0 2 0 0 1 1 1 0 0 1 1 1 2 1 1 0 1 2 0 0 17 0 1862.8509 P53396 P53396 522 538 ACLY ATP-citrate synthase yes yes 2 1.1979E-06 172.76 By MS/MS 4 0 2 2 1164200 1164200 0 2234 1001 2304;2305 5622;5623 4063;4064 4064 757 2 31781 0 DEQLLTNVLETLR DSFNATYVQPRRKQRDEQLLTNVLETLRGD QRDEQLLTNVLETLRGDGNVLIAVDTAGRV R D E L R G 0 1 1 1 0 1 2 0 0 0 4 0 0 0 0 0 2 0 0 1 0 0 13 0 1542.8253 Q9P2I0 Q9P2I0 216 228 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 2 2.4507E-05 167.84 By MS/MS 4 0 1 1 57295 57295 0 2235 2737 2306 5624 4065;4066;4067 4066 3 1564.1 0 DESSPYAAMLAAQDVAQR TICRVTGGMKVKADRDESSPYAAMLAAQDV SPYAAMLAAQDVAQRCKELGITALHIKLRA R D E Q R C 5 1 0 2 0 2 1 0 0 0 1 0 1 0 1 2 0 0 1 1 0 0 18 0 1921.884 P62263 P62263 67 84 RPS14 40S ribosomal protein S14 yes yes 2 9.7968E-19 198.29 By MS/MS 10 0 2 2 763360 763360 0 2236 1122 2307;2308 5625;5626 4068;4069 4068 879 2 811370 0 DETNYGIPQR SASRDKTIIMWKLTRDETNYGIPQRALRGH WKLTRDETNYGIPQRALRGHSHFVSDVVIS R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 P63244 P63244 48 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 9.2069E-11 207.29 By MS/MS By matching 8.75 0.829 2 1 1 3 1 9508100 9427700 80394 2237 1178 2309 5627;5628;5629;5630 4070 4070 1 778600 685860 DEVASLLFDPK QRLALPQSDASLLSRDEVASLLFDPKEAAT LLSRDEVASLLFDPKEAATIDRDTAFAIGC R D E P K E 1 0 0 2 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 1 0 0 11 0 1232.6289 Q9H583 Q9H583 24 34 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.0016104 140.75 By MS/MS 1.5 0.5 1 1 2 93059 93059 0 2238 2503 2310 5631;5632 4071;4072 4072 2 4625.5 0 DEVLANR ILSWTGLATPTGVPKDEVLANRLLNFLMKH ATPTGVPKDEVLANRLLNFLMKHVFHPKRA K D E N R L 1 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 815.41373 P78527 P78527 2208 2214 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.010047 153.88 By MS/MS 1.5 0.5 1 1 2 1977000 1977000 0 2239 1197 2311 5633;5634 4073;4074 4073 2 97328 0 DFADILVQPTLEENK EEEREFRKQFPLHEKDFADILVQPTLEENK DFADILVQPTLEENKGTSDGQEEEAGTNPA K D F N K G 1 0 1 2 0 1 2 0 0 1 2 1 0 1 1 0 1 0 0 1 0 0 15 0 1730.8727 Q9NU22 Q9NU22 3584 3598 MDN1 Midasin yes yes 2 0.00035453 128.36 By MS/MS 1.5 0.5 1 1 2 201590 201590 0 2240 2635 2312 5635;5636 4075;4076 4075 2 9887.8 0 DFASIVLLDQR KAVNQSIGRAIRHQKDFASIVLLDQRYARP RHQKDFASIVLLDQRYARPPVLAKLPAWIR K D F Q R Y 1 1 0 2 0 1 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1275.6823 A8MPP1;Q92771 A8MPP1 855 865 DDX11L8;DDX12P Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12 yes no 2 0.0010991 152.97 By MS/MS 4 0 1 1 258610 258610 0 2241 26 2313 5637 4077 4077 1 7059.8 0 DFCIEASER QREAAFSPGQQDWSRDFCIEASERSYQFGI QQDWSRDFCIEASERSYQFGIIGNDRVSGA R D F E R S 1 1 0 1 1 0 2 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1125.4761 Q9C0C2 Q9C0C2 1112 1120 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.010364 104.01 By MS/MS 2 0 1 1 153890 153890 0 2242 2433 2314 5638 4078 4078 1 7649 0 DFDGLVQVIIPQDESAASVK GWIQYRRQNTFLVLRDFDGLVQVIIPQDES VQVIIPQDESAASVKKILCEAPVESVVQVS R D F V K K 2 0 0 3 0 2 1 1 0 2 1 1 0 1 1 2 0 0 0 3 0 0 20 0 2130.0845 Q6PI48 Q6PI48 85 104 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.0082128 76.588 By MS/MS 5.33 0.471 2 1 3 856230 856230 0 2243 1715 2315 5639;5640;5641 4079;4080 4080 2 18527 0 DFDWNLK PVLEKLRSINNYNPKDFDWNLKHGRVFIIK SINNYNPKDFDWNLKHGRVFIIKSYSEDDI K D F L K H 0 0 1 2 0 0 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 7 0 936.43413 Q7Z739;Q9Y5A9 Q9Y5A9 402 408 YTHDF3;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 2 no no 2 0.022086 120.65 By MS/MS 5 0 1 1 262190 262190 0 2244 2966;1804 2316 5642 4081 4081 1 10777 0 DFEPILEQQIHQDDFGESK VLLATGQQTLIMMTKDFEPILEQQIHQDDF ILEQQIHQDDFGESKFITVGWGRKETQFHG K D F S K F 0 0 0 3 0 3 3 1 1 2 1 1 0 2 1 1 0 0 0 0 0 0 19 0 2274.0441 O95163 O95163 139 157 IKBKAP Elongator complex protein 1 yes yes 3 0.03783 57.499 By MS/MS 3 0 1 1 263230 263230 0 2245 368 2317 5643 4082 4082 1 6871.6 0 DFEQPLAISR LQGPGPWGFRLVGGKDFEQPLAISRVTPGS LVGGKDFEQPLAISRVTPGSKAALANLCIG K D F S R V 1 1 0 1 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 10 0 1174.5982 O00151 O00151 23 32 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.00076505 133.75 By MS/MS 8 0 1 1 772130 772130 0 2246 71 2318 5644 4083 4083 1 50937 0 DFESHITSYK KALSTLRQKIRKYNRDFESHITSYKQNPEQ RKYNRDFESHITSYKQNPEQSADEDAEKNE R D F Y K Q 0 0 0 1 0 0 1 0 1 1 0 1 0 1 0 2 1 0 1 0 0 0 10 0 1225.5615 Q99613;B5ME19 Q99613 151 160 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.00036221 150.36 By MS/MS 4 0.816 1 1 1 3 8087600 8087600 0 2247 2275 2319 5645;5646;5647 4084 4084 1 227380 0 DFFDAEIK YILRPWAYAIWEAIKDFFDAEIKKLGVENC AIWEAIKDFFDAEIKKLGVENCYFPMFVSQ K D F I K K 1 0 0 2 0 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 8 0 983.46001 P07814 P07814 1062 1069 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.048699 91.853 By MS/MS 3 0 1 1 904560 904560 0 2248 493 2320 5648 4085 4085 1 23614 0 DFFLANASR VPPELVGQPAVHLKRDFFLANASRARSEQF AVHLKRDFFLANASRARSEQFINLREVSTR R D F S R A 2 1 1 1 0 0 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 9 0 1039.5087 P07384 P07384 463 471 CAPN1 Calpain-1 catalytic subunit yes yes 2 0.019698 102.62 By MS/MS 5 0 1 1 0 0 0 2249 489 2321 5649 4086 4086 1 0 0 DFHILFVPR IAENVLSEDRRGPTRDFHILFVPRRSLLCE RRGPTRDFHILFVPRRSLLCEQRLKDLGVL R D F P R R 0 1 0 1 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 1 0 0 9 0 1142.6237 Q96AX1 Q96AX1 108 116 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 2 0.001411 136.16 By MS/MS 5.5 0.5 1 1 2 409030 409030 0 2250 2124 2322 5650;5651 4087 4087 1 13084 0 DFIDSLGLLHEQNMAK SAKLASYVKFYQNNKDFIDSLGLLHEQNMA FIDSLGLLHEQNMAKMRLLTFMGMAVENKE K D F A K M 1 0 1 2 0 1 1 1 1 1 3 1 1 1 0 1 0 0 0 0 0 0 16 0 1829.8982 Q7L2H7 Q7L2H7 261 276 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 3 0.030147 66.387 By MS/MS 7.5 0.5 1 1 2 721460 721460 0 2251 1764 2323 5652;5653 4088 4088 1249 1 17913 0 DFIIFEAAPQETR GNVAAILELDEHLQKDFIIFEAAPQETRGI QKDFIIFEAAPQETRGIPSKKPVADYFL__ K D F T R G 2 1 0 1 0 1 2 0 0 2 0 0 0 2 1 0 1 0 0 0 0 0 13 0 1535.762 P60510 P60510 282 294 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 2 3.7865E-05 178.67 By MS/MS 8 0 1 1 1193900 1193900 0 2252 1067 2324 5654 4089 4089 1 78762 0 DFILPISDVR HLSLSHQPDKKGVPRDFILPISDVRASIGA KGVPRDFILPISDVRASIGAGFIYPLVGTM R D F V R A 0 1 0 2 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 10 0 1173.6394 Q6UB35 Q6UB35 926 935 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0031126 113.62 By MS/MS By MS/MS 5.36 2.77 1 1 1 2 1 1 1 1 1 1 10 1 23968000 23782000 186130 2253 1726 2325 5655;5656;5657;5658;5659;5660;5661;5662;5663;5664;5665 4090;4091;4092;4093;4094;4095;4096;4097 4093 8 808930 388930 DFINFISDK KDGEFRRYQGPRTKKDFINFISDKEWKSIE GPRTKKDFINFISDKEWKSIEPVSSWFGPG K D F D K E 0 0 1 2 0 0 0 0 0 2 0 1 0 2 0 1 0 0 0 0 0 0 9 0 1097.5393 Q9H3N1 Q9H3N1 122 130 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.0053783 114.89 By MS/MS 8 0 1 1 136540 136540 0 2254 2489 2326 5666 4098 4098 1 9007.6 0 DFKDGTFDPDNLEK AAQLFSEAVAPAIEKDFKDGTFDPDNLEKY KDFKDGTFDPDNLEKYGFEPTQEGKLFQLY K D F E K Y 0 0 1 4 0 0 1 1 0 0 1 2 0 2 1 0 1 0 0 0 0 0 14 1 1639.7366 Q8IXM3 Q8IXM3 103 116 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 3.0913E-08 208.82 By MS/MS 10 0 1 1 528880 528880 0 2255 1873 2327 5667 4099 4099 1 562150 0 DFKENNVVFNR GVVLHKDSKWYQQWKDFKENNVVFNRFFEM QQWKDFKENNVVFNRFFEMKMKYDESDNAF K D F N R F 0 1 3 1 0 0 1 0 0 0 0 1 0 2 0 0 0 0 0 2 0 0 11 1 1380.6786 O43615 O43615 247 257 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.027186 84.198 By MS/MS 7.5 0.5 1 1 2 7385000 7385000 0 2256 209 2328 5668;5669 4100 4100 1 148810 0 DFLAGGIAAAISK ______________________________ AKDFLAGGIAAAISKTAVAPIERVKLLLQV K D F S K T 4 0 0 1 0 0 0 2 0 2 1 1 0 1 0 1 0 0 0 0 0 0 13 0 1232.6765 P12236 P12236 11 23 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 1.249E-13 214.26 By MS/MS By MS/MS 5.78 3.12 1 1 1 1 1 2 1 1 8 1 30191000 30065000 125840 2257 563 2329 5670;5671;5672;5673;5674;5675;5676;5677;5678 4101;4102;4103;4104;4105;4106;4107;4108;4109;4110;4111;4112 4109 12 3785100 1073600 DFLAGGVAAAISK ______________________________ AKDFLAGGVAAAISKTAVAPIERVKLLLQV K D F S K T 4 0 0 1 0 0 0 2 0 1 1 1 0 1 0 1 0 0 0 1 0 0 13 0 1218.6608 P05141 P05141 11 23 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 1.6507E-05 186.81 By MS/MS By MS/MS 6.53 2.8 1 1 1 1 1 1 1 4 2 2 14 1 202280000 201000000 1277500 2258 469 2330 5679;5680;5681;5682;5683;5684;5685;5686;5687;5688;5689;5690;5691;5692;5693 4113;4114;4115;4116;4117;4118;4119;4120;4121;4122;4123;4124;4125;4126;4127;4128 4118 16 20717000 10898000 DFLAGGVAAAVSK ______________________________ LKDFLAGGVAAAVSKTAVAPIERVKLLLQV K D F S K T 4 0 0 1 0 0 0 2 0 0 1 1 0 1 0 1 0 0 0 2 0 0 13 0 1204.6452 P12235 P12235 11 23 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.00072537 134.75 By MS/MS 8 0 1 1 483240 483240 0 2259 562 2331 5694 4129 4129 1 31879 0 DFLDSLGFSTR LSSKGVKIWDANGSRDFLDSLGFSTREEGD NGSRDFLDSLGFSTREEGDLGPVYGFQWRH R D F T R E 0 1 0 2 0 0 0 1 0 0 2 0 0 2 0 2 1 0 0 0 0 0 11 0 1256.6037 P04818 P04818 116 126 TYMS Thymidylate synthase yes yes 2 0.0076545 100.48 By MS/MS 8 0 1 1 57633 57633 0 2260 457 2332 5695 4130 4130 1 3802 0 DFLHLFEK QDKFHELMSQLQNPKDFLHLFEKNMIPERT SQLQNPKDFLHLFEKNMIPERTVEFQHIIP K D F E K N 0 0 0 1 0 0 1 0 1 0 2 1 0 2 0 0 0 0 0 0 0 0 8 0 1047.5389 A4D1E9 A4D1E9 301 308 GTPBP10 GTP-binding protein 10 yes yes 2 0.012293 116.73 By MS/MS 7 0 1 1 985590 985590 0 2261 14 2333 5696 4131 4131 1 17613 0 DFLIPIGK MYGVPFEFPPEAQSKDFLIPIGKAKIERQG PPEAQSKDFLIPIGKAKIERQGTHITVVSH K D F G K A 0 0 0 1 0 0 0 1 0 2 1 1 0 1 1 0 0 0 0 0 0 0 8 0 901.5273 P11177 P11177 220 227 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.028655 116.54 By MS/MS 7.5 0.5 1 1 2 13891000 13891000 0 2262 549 2334 5697;5698 4132;4133 4133 2 248240 0 DFLLQQTMLR EAALSCCSDADPSTKDFLLQQTMLRVKDPK DPSTKDFLLQQTMLRVKDPKKSLDFYTRVL K D F L R V 0 1 0 1 0 2 0 0 0 0 3 0 1 1 0 0 1 0 0 0 0 0 10 0 1263.6645 Q04760 Q04760 29 38 GLO1 Lactoylglutathione lyase yes yes 2 0.00095715 119.22 By MS/MS 9 0 1 1 140480 140480 0 2263 1266 2335 5699 4134 4134 1029 1 80625 0 DFLLTAR ______________________________ PRKIEEIKDFLLTARRKDAKSVKIKKNKDN K D F A R R 1 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 7 0 834.45995 P63173 P63173 10 16 RPL38 60S ribosomal protein L38 yes yes 2 0.039937 108.09 By MS/MS 10 0 1 1 328820 328820 0 2264 1173 2336 5700 4135 4135 1 349500 0 DFLQTFR GNVNIIQPNYPAAARDFLQTFRRGLLGSVM PNYPAAARDFLQTFRRGLLGSVMLDLDVLR R D F F R R 0 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 7 0 925.46577 Q9BT17 Q9BT17 304 310 MTG1 Mitochondrial ribosome-associated GTPase 1 yes yes 2 0.013932 143.11 By MS/MS 8 0 1 1 870610 870610 0 2265 2343 2337 5701 4136 4136 1 57434 0 DFLSVMLEK KLLRHHLQIPIHFPKDFLSVMLEKGSLSAM PIHFPKDFLSVMLEKGSLSAMRFLTAVNLE K D F E K G 0 0 0 1 0 0 1 0 0 0 2 1 1 1 0 1 0 0 0 1 0 0 9 0 1080.5525 Q9Y2Q3 Q9Y2Q3 86 94 GSTK1 Glutathione S-transferase kappa 1 yes yes 2 0.028357 85.161 By MS/MS 9 0 2 2 186920 186920 0 2266 2895 2338;2339 5702;5703 4137;4138 4137 1666 2 107280 0 DFLVQIK FSLNQDIPAFKEHLRDFLVQIKEFAGEDTS PAFKEHLRDFLVQIKEFAGEDTSDLFLEER R D F I K E 0 0 0 1 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 7 0 861.496 O14980 O14980 1017 1023 XPO1 Exportin-1 yes yes 2 0.019236 128.48 By MS/MS 3.5 0.5 1 1 2 1342400 1342400 0 2267 142 2340 5704;5705 4139 4139 1 36490 0 DFMFQPLDGLK INTAKIKGKNSFAPKDFMFQPLDGLKTYQV FAPKDFMFQPLDGLKTYQVTPMTPRSANAF K D F L K T 0 0 0 2 0 1 0 1 0 0 2 1 1 2 1 0 0 0 0 0 0 0 11 0 1309.6377 Q15398 Q15398 311 321 DLGAP5 Disks large-associated protein 5 yes yes 2 0.012564 90.827 By MS/MS 4 0 1 1 162130 162130 0 2268 1499 2341 5706 4140 4140 1158 1 4425.9 0 DFNQFIK KEKLLTQGFTNWNKRDFNQFIKANEKWGRD GFTNWNKRDFNQFIKANEKWGRDDIENIAR R D F I K A 0 0 1 1 0 1 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 7 0 910.45487 O60264;P28370 O60264 849 855 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.0030998 186.67 By MS/MS 3.5 0.5 1 1 2 2178300 2178300 0 2269 240;720 2342 5707;5708 4141 4141 1 57030 0 DFPAVDSVLVK FVWKQLSGEEVSWSKDFPAVDSVLVKLLEV SWSKDFPAVDSVLVKLLEVMEGMDKETFEF K D F V K L 1 0 0 2 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 3 0 0 11 0 1188.639 Q5T447 Q5T447 637 647 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 2 0.018034 102.06 By MS/MS 4 0 1 1 316400 316400 0 2270 1626 2343 5709 4142 4142 1 8637.3 0 DFPDEVLQLIHER VDPEMRIRFTSPHPKDFPDEVLQLIHERDN PKDFPDEVLQLIHERDNICKQIHLPAQSGS K D F E R D 0 1 0 2 0 1 2 0 1 1 2 0 0 1 1 0 0 0 0 1 0 0 13 0 1609.81 Q96SZ6 Q96SZ6 379 391 CDK5RAP1 CDK5 regulatory subunit-associated protein 1 yes yes 2 0.00069745 135.1 By MS/MS 6 0 1 1 800820 800820 0 2271 2258 2344 5710 4143 4143 1 6244.9 0 DFPLSGYVELR RILTDYGFEGHPFRKDFPLSGYVELRYDDE PFRKDFPLSGYVELRYDDEVKRVVAEPVEL K D F L R Y 0 1 0 1 0 0 1 1 0 0 2 0 0 1 1 1 0 0 1 1 0 0 11 0 1294.6558 O75489 O75489 201 211 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 3.7139E-05 171.33 By MS/MS 8.5 0.5 1 1 2 2491700 2491700 0 2272 313 2345 5711;5712 4144 4144 1 183150 0 DFQKDFVK VVGTERGRAFVNTRKDFQKDFVKYCVEEEE AFVNTRKDFQKDFVKYCVEEEEKAAEMHKM K D F V K Y 0 0 0 2 0 1 0 0 0 0 0 2 0 2 0 0 0 0 0 1 0 0 8 1 1025.5182 P78347 P78347 71 78 GTF2I General transcription factor II-I yes yes 2 0.046875 132.08 By MS/MS 3.5 0.5 1 1 2 2186800 2186800 0 2273 1194 2346 5713;5714 4145 4145 1 57499 0 DFSHTGR IKKGILLQLFGGTRKDFSHTGRGKFRAEIN QLFGGTRKDFSHTGRGKFRAEINILLCGDP K D F G R G 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 7 0 818.36712 P33991 P33991 491 497 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.045203 104.45 By MS/MS 3.5 0.5 1 1 2 1351900 1351900 0 2274 773 2347 5715;5716 4146 4146 1 36838 0 DFSLEQLR GEESPATSLPRMKKRDFSLEQLRQYDGSRN LPRMKKRDFSLEQLRQYDGSRNPRILLAVN R D F L R Q 0 1 0 1 0 1 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 1006.5084 O15173 O15173 102 109 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 0.002681 149.65 By MS/MS 7.5 1.12 1 1 1 1 4 4532800 4532800 0 2275 157 2348 5717;5718;5719;5720 4147;4148 4147 2 999990 0 DFSMADKVLPTIPK LLVSVLEYQTAVMRRDFSMADKVLPTIPKE RDFSMADKVLPTIPKEQRTRVAHFLEKQGF R D F P K E 1 0 0 2 0 0 0 0 0 1 1 2 1 1 2 1 1 0 0 1 0 0 14 1 1560.8222 P35606 P35606 602 615 COPB2 Coatomer subunit beta yes yes 3 0.050443 57.434 By MS/MS 1 0 1 1 205210 205210 0 2276 795 2349 5721 4149 4149 1 10026 0 DFSPSGIFGAFQR LEVKLGELPSWILMRDFSPSGIFGAFQRGY MRDFSPSGIFGAFQRGYYRYYNKYINVKKG R D F Q R G 1 1 0 1 0 1 0 2 0 1 0 0 0 3 1 2 0 0 0 0 0 0 13 0 1427.6834 P56134 P56134 34 46 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.0016012 123.96 By MS/MS 10 0 1 1 172250 172250 0 2277 1041 2350 5722 4150 4150 1 183080 0 DFSVFFQK EMALKNKAAKGSATKDFSVFFQKIRETGER AKGSATKDFSVFFQKIRETGERPSNEEIMR K D F Q K I 0 0 0 1 0 1 0 0 0 0 0 1 0 3 0 1 0 0 0 1 0 0 8 0 1016.4967 O95202 O95202 285 292 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 4.1052E-05 197.65 By MS/MS 5 0.816 1 1 1 3 1637600 1637600 0 2278 374 2351 5723;5724;5725 4151 4151 1 55873 0 DFTATDLSEFAAK AAKRTPFGAYGGLLKDFTATDLSEFAAKAA LKDFTATDLSEFAAKAALSAGKVSPETVDS K D F A K A 3 0 0 2 0 0 1 0 0 0 1 1 0 2 0 1 2 0 0 0 0 0 13 0 1414.6616 P42765 P42765 26 38 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 0.00027715 144.55 By MS/MS 7 0 1 1 11156000 11156000 0 2279 855 2352 5726 4152;4153 4153 2 199360 0 DFTATFGPLDSLNTR VLSAAMYPDVFAHFKDFTATFGPLDSLNTR DFTATFGPLDSLNTRLFLQGPKIAEEFEVE K D F T R L 1 1 1 2 0 0 0 1 0 0 2 0 0 2 1 1 3 0 0 0 0 0 15 0 1653.7999 P11498 P11498 1022 1036 PC Pyruvate carboxylase, mitochondrial yes yes 2 5.0776E-10 187.58 By MS/MS 4.5 1.12 1 1 1 1 4 495300 495300 0 2280 555 2353 5727;5728;5729;5730 4154 4154 1 12014 0 DFTPVCTTELGR DFLGDSWGILFSHPRDFTPVCTTELGRAAK HPRDFTPVCTTELGRAAKLAPEFAKRNVKL R D F G R A 0 1 0 1 1 0 1 1 0 0 1 0 0 1 1 0 3 0 0 1 0 0 12 0 1394.65 P30041 P30041 42 53 PRDX6 Peroxiredoxin-6 yes yes 2 0.019925 85.958 By MS/MS 8.5 0.5 1 1 2 816910 816910 0 2281 729 2354 5731;5732 4155 4155 1 86163 0 DFTQYIFTEK GIKIKETMYFAPSMKDFTQYIFTEKLKQDK APSMKDFTQYIFTEKLKQDKGSDASWKNDQ K D F E K L 0 0 0 1 0 1 1 0 0 1 0 1 0 2 0 0 2 0 1 0 0 0 10 0 1290.6132 Q96HR8 Q96HR8 281 290 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 2 0.00094159 125.57 By MS/MS 5 0 1 1 141580 141580 0 2282 2195 2355 5733 4156 4156 1 5819.5 0 DFTVASPAEFVTR LVKQGRDRKKIDSQRDFTVASPAEFVTRFG QRDFTVASPAEFVTRFGGNKVIEKVLIANN R D F T R F 2 1 0 1 0 0 1 0 0 0 0 0 0 2 1 1 2 0 0 2 0 0 13 0 1438.7092 Q13085;O00763 Q13085 99 111 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 2 0.0017921 121.6 By MS/MS 2 0.816 1 1 1 3 295400 295400 0 2283 1332 2356 5734;5735;5736 4157 4157 1 10671 0 DFTVLVDR DLQHVAKETGGFVARDFTVLVDRAIHSRLS TGGFVARDFTVLVDRAIHSRLSRQSISTRE R D F D R A 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 963.50255 O43933 O43933 783 790 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.0059533 133.55 By MS/MS 4 0.816 1 1 1 3 1644900 1644900 0 2284 235 2357 5737;5738;5739 4158 4158 1 56842 0 DFTVSAMHGDMDQK TRRKVDWLTEKMHARDFTVSAMHGDMDQKE RDFTVSAMHGDMDQKERDVIMREFRSGSSR R D F Q K E 1 0 0 3 0 1 0 1 1 0 0 1 2 1 0 1 1 0 0 1 0 0 14 0 1580.6599 P60842 P60842 296 309 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 4.1292E-46 271.21 By MS/MS 4.75 2.73 7 7 5 1 2 7 7 4 4 44 257490000 257490000 0 2285 1074 2358;2359;2360 5740;5741;5742;5743;5744;5745;5746;5747;5748;5749;5750;5751;5752;5753;5754;5755;5756;5757;5758;5759;5760;5761;5762;5763;5764;5765;5766;5767;5768;5769;5770;5771;5772;5773;5774;5775;5776;5777;5778;5779;5780;5781;5782;5783 4159;4160;4161;4162;4163;4164;4165;4166;4167;4168;4169;4170;4171;4172;4173;4174;4175;4176;4177;4178 4176 841;842 20 3038300 0 DFTVSAMHGDMDQKER TRRKVDWLTEKMHARDFTVSAMHGDMDQKE FTVSAMHGDMDQKERDVIMREFRSGSSRVL R D F E R D 1 1 0 3 0 1 1 1 1 0 0 1 2 1 0 1 1 0 0 1 0 0 16 1 1865.8036 P60842 P60842 296 311 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 4.4827E-14 195.71 By MS/MS By matching 5.56 2.63 4 3 3 3 2 10 4 4 4 2 38 1 790410000 790380000 22061 2286 1074 2361;2362;2363 5784;5785;5786;5787;5788;5789;5790;5791;5792;5793;5794;5795;5796;5797;5798;5799;5800;5801;5802;5803;5804;5805;5806;5807;5808;5809;5810;5811;5812;5813;5814;5815;5816;5817;5818;5819;5820;5821;5822 4179;4180;4181;4182;4183;4184;4185;4186;4187;4188;4189;4190;4191;4192;4193;4194;4195;4196;4197;4198;4199;4200;4201;4202 4198 841;842 24 8388600 67661 DFTVSAMHGDMDQKERDVIMR TRRKVDWLTEKMHARDFTVSAMHGDMDQKE MHGDMDQKERDVIMREFRSGSSRVLITTDL R D F M R E 1 2 0 4 0 1 1 1 1 1 0 1 3 1 0 1 1 0 0 2 0 0 21 2 2480.1246 P60842 P60842 296 316 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 3;4 0.0014698 86.573 By MS/MS 6 0 3 3 36043000 36043000 0 2287 1074 2364;2365 5823;5824;5825 4203;4204;4205 4204 841;842;843 3 281060 0 DFVNYLVR GNSTNKKDAQSNAARDFVNYLVRINEIKSE AQSNAARDFVNYLVRINEIKSEEVPAFGVA R D F V R I 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 8 0 1024.5342 Q08211 Q08211 64 71 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0010422 172.15 By MS/MS 4.29 2.37 1 1 1 1 1 1 1 7 3760200 3760200 0 2288 1287 2366 5826;5827;5828;5829;5830;5831;5832 4206;4207;4208;4209;4210 4208 5 110460 0 DFVTTAEDR HTNYIYSISVFPNCRDFVTTAEDRSLRIWK VFPNCRDFVTTAEDRSLRIWKHGECAQTIR R D F D R S 1 1 0 2 0 0 1 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 9 0 1052.4775 Q9Y263 Q9Y263 245 253 PLAA Phospholipase A-2-activating protein yes yes 2 0.0055661 126.24 By MS/MS 1 0 1 1 0 0 0 2289 2869 2367 5833 4211 4211 1 0 0 DFWEQEVR GLRAIDTTQLFSLPKDFWEQEVRDIRSYLT QLFSLPKDFWEQEVRDIRSYLTEQVNQDLP K D F V R D 0 1 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 8 0 1107.4985 Q16822 Q16822 601 608 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.0089094 122.52 By MS/MS 4.5 0.5 1 1 2 314810 314810 0 2290 1550 2368 5834;5835 4212 4212 1 12593 0 DFYVAFQDLPTR LKTFVKDRKEIPLAKDFYVAFQDLPTRHKI LAKDFYVAFQDLPTRHKIRELTSSRIGLLT K D F T R H 1 1 0 2 0 1 0 0 0 0 1 0 0 2 1 0 1 0 1 1 0 0 12 0 1470.7143 Q14566 Q14566 109 120 MCM6 DNA replication licensing factor MCM6 yes yes 2 2.7932E-07 187.31 By MS/MS 4.5 0.5 1 1 2 3607100 3607100 0 2291 1436 2369 5836;5837 4213 4213 1 99313 0 DGAASLSYR ILMSPNSYIKLQTNRDGAASLSYRVLDGPE KLQTNRDGAASLSYRVLDGPEKVPVVHVDE R D G Y R V 2 1 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 9 0 938.44576 Q8TEM1 Q8TEM1 1313 1321 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.038753 86.136 By MS/MS 1.5 0.5 1 1 2 239940 239940 0 2292 2002 2370 5838;5839 4214 4214 1 11868 0 DGAFAEFLR GKISEMGSYQELLARDGAFAEFLRTYASTE QELLARDGAFAEFLRTYASTEQEQDAEENG R D G L R T 2 1 0 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 9 0 1024.4978 P33527 P33527 859 867 ABCC1 Multidrug resistance-associated protein 1 yes yes 2 0.0038023 118.33 By MS/MS 2 0.816 1 1 1 3 343050 343050 0 2293 769 2371 5840;5841;5842 4215;4216 4216 2 12954 0 DGANIVIAAK ASRGIGKAIALKAAKDGANIVIAAKTAQPH LKAAKDGANIVIAAKTAQPHPKLLGTIYTA K D G A K T 3 0 1 1 0 0 0 1 0 2 0 1 0 0 0 0 0 0 0 1 0 0 10 0 970.54475 Q6YN16 Q6YN16 33 42 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 2 3.7158E-06 186.41 By MS/MS 7 0 1 1 0 0 0 2294 1738 2372 5843 4217 4217 1 0 0 DGAWGAFR LQKVLQGDLVMNVYRDGAWGAFRHFLLEED LVMNVYRDGAWGAFRHFLLEEDKPEEPTAH R D G F R H 2 1 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 8 0 878.4035 P49327 P49327 1508 1515 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0038196 143.85 By MS/MS 2.17 1.07 2 2 1 1 6 3412600 3412600 0 2295 915 2373 5844;5845;5846;5847;5848;5849 4218;4219;4220;4221;4222 4219 5 129190 0 DGDESSPILTSFELVK VKCDDKEYGIVYYEKDGDESSPILTSFELV GDESSPILTSFELVKVPDPQMSMENLVESK K D G V K V 0 0 0 2 0 0 2 1 0 1 2 1 0 1 1 3 1 0 0 1 0 0 16 0 1735.8516 Q8NEB9 Q8NEB9 239 254 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 2 0.00048819 122.55 By MS/MS 4 0 1 1 280870 280870 0 2296 1964 2374 5850 4223 4223 1 7667.5 0 DGDVTVTNDGATILSMMDVDHQIAK TSLGPNGLDKMMVDKDGDVTVTNDGATILS ATILSMMDVDHQIAKLMVELSKSQDDEIGD K D G A K L 2 0 1 5 0 1 0 2 1 2 1 1 2 0 0 1 3 0 0 3 0 0 25 0 2645.2313 P48643 P48643 65 89 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.00060367 76.533 By MS/MS 6 0 1 1 1935500 1935500 0 2297 909 2375 5851 4224 4224 1 15093 0 DGEDQTQDTELVETRPAGDGTFQK ALGFYPAEITLTWQRDGEDQTQDTELVETR ELVETRPAGDGTFQKWAAVVVPSGQEQRYT R D G Q K W 1 1 0 4 0 3 3 3 0 0 1 1 0 1 1 0 4 0 0 1 0 0 24 1 2636.1838 P04439;P10321;P01893 P10321 244 267 HLA-A;HLA-C;HLA-H HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H no no 2;3 8.5415E-09 144.29 By MS/MS 7.6 0.8 3 1 1 5 31707000 31707000 0 2298 536;453 2376 5852;5853;5854;5855;5856 4225;4226;4227;4228;4229 4228 5 895220 0 DGEDQTQDTELVETRPAGDR ALGFYPAEITLTWQRDGEDQTQDTELVETR TQDTELVETRPAGDRTFQKWAAVVVPSGEE R D G D R T 1 2 0 4 0 2 3 2 0 0 1 0 0 0 1 0 3 0 0 1 0 0 20 1 2230.9938 P01889 P01889 244 263 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain yes yes 3 0.00027818 109.67 By MS/MS 8 0.816 1 1 1 3 7014700 7014700 0 2299 436 2377 5857;5858;5859 4230;4231 4230 2 265270 0 DGELPVEDDIDLSDVELDDLGKDEL GAFPTIVEREPWDGRDGELPVEDDIDLSDV DLSDVELDDLGKDEL_______________ R D G E L - 0 0 0 8 0 0 4 2 0 1 5 1 0 0 1 1 0 0 0 2 0 0 25 1 2757.2604 Q15084 Q15084 416 440 PDIA6 Protein disulfide-isomerase A6 yes yes 2 8.0643E-06 128.45 By MS/MS 6 0 1 1 490940 490940 0 2300 1478 2378 5860 4232;4233 4233 2 3828.3 0 DGENYVVLLDSTLPR SLGQSLFFHFPPLLRDGENYVVLLDSTLPR DGENYVVLLDSTLPRSQYDYILPQVSFTAV R D G P R S 0 1 1 2 0 0 1 1 0 0 3 0 0 0 1 1 1 0 1 2 0 0 15 0 1689.8574 Q15155;P69849;Q5JPE7 Q15155 1106 1120 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 0.00038073 127.52 By MS/MS 3 0 1 1 37234 37234 0 2301 1190 2379 5861 4234 4234 1 971.99 0 DGEQHEDLNEVAK WNIFNRMPIARKIIKDGEQHEDLNEVAKLF IKDGEQHEDLNEVAKLFNIHED________ K D G A K L 1 0 1 2 0 1 3 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 13 0 1482.6587 O95831 O95831 594 606 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 0.00019203 140.01 By MS/MS 5.33 0.471 2 1 3 3993200 3993200 0 2302 409 2380 5862;5863;5864 4235;4236 4235 2 130610 0 DGETLEELMKLSPEELLLR DIELSRNEALAALLRDGETLEELMKLSPEE LEELMKLSPEELLLRWANFHLENSGWQKIN R D G L R W 0 1 0 1 0 0 5 1 0 0 6 1 1 0 1 1 1 0 0 0 0 0 19 1 2214.1454 P13797 P13797 257 275 PLS3 Plastin-3 yes yes 4 0.028803 53.565 By MS/MS 4.5 0.5 1 1 2 3923200 3923200 0 2303 580 2381 5865;5866 4237 4237 372 1 160260 0 DGFFTLDSALLR ELKTTAVCTQVRRTRDGFFTLDSALLRTQW RTRDGFFTLDSALLRTQWDLTNIQDAIRAA R D G L R T 1 1 0 2 0 0 0 1 0 0 3 0 0 2 0 1 1 0 0 0 0 0 12 0 1353.6929 O95900 O95900 260 271 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 0.0090155 117.7 By MS/MS 7.5 0.5 1 1 2 289470 289470 0 2304 414 2382 5867;5868 4238 4238 1 11974 0 DGFGFIK FTNEAREMGVIAAMRDGFGFIKCVDRDVRM MGVIAAMRDGFGFIKCVDRDVRMFFHFSEI R D G I K C 0 0 0 1 0 0 0 2 0 1 0 1 0 2 0 0 0 0 0 0 0 0 7 0 782.39629 O75534 O75534 358 364 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.020544 124.89 By MS/MS 4.5 1.12 1 1 1 1 4 2659000 2659000 0 2305 316 2383 5869;5870;5871;5872 4239 4239 1 92689 0 DGFLAFQTSR SIRSFVSKMSPLDMKDGFLAFQTSRYKLHY PLDMKDGFLAFQTSRYKLHYYETPTGIKVV K D G S R Y 1 1 0 1 0 1 0 1 0 0 1 0 0 2 0 1 1 0 0 0 0 0 10 0 1140.5564 Q9Y5R8 Q9Y5R8 59 68 TRAPPC1 Trafficking protein particle complex subunit 1 yes yes 2 0.0065456 115.78 By MS/MS 10 0 1 1 200870 200870 0 2306 2979 2384 5873 4240 4240 1 213510 0 DGGPVTSQESGQK AINLLPLLFSQDFAKDGGPVTSQESGQKLV AKDGGPVTSQESGQKLVSPLCLAPYFRLLR K D G Q K L 0 0 0 1 0 2 1 3 0 0 0 1 0 0 1 2 1 0 0 1 0 0 13 0 1288.5895 Q9BXW9 Q9BXW9 711 723 FANCD2 Fanconi anemia group D2 protein yes yes 2 7.474E-05 156.58 By MS/MS 3 0 1 1 138280 138280 0 2307 2405 2385 5874 4241 4241 1 3609.7 0 DGGSGNSTIIVSR VENELEDLIDELLERDGGSGNSTIIVSRSG ERDGGSGNSTIIVSRSGEDESQEDVLMDEA R D G S R S 0 1 1 1 0 0 0 3 0 2 0 0 0 0 0 3 1 0 0 1 0 0 13 0 1261.6262 Q7Z6Z7 Q7Z6Z7 2359 2371 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0031751 142.19 By MS/MS 1 0 1 1 168590 168590 0 2308 1803 2386 5875 4242 4242 1 8236.8 0 DGGVCLLSGTK GVCTFAVGPEQGGCKDGGVCLLSGTKGASF GGCKDGGVCLLSGTKGASFGRLQSMKLDYR K D G T K G 0 0 0 1 1 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 0 11 0 1105.5438 P11717 P11717 1852 1862 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0017243 123.96 By MS/MS 1.5 0.5 1 1 2 247940 247940 0 2309 557 2387 5876;5877 4243 4243 1 12275 0 DGIDDESYGQIFKPIISK GAGKGKYYAVNFPMRDGIDDESYGQIFKPI DDESYGQIFKPIISKVMEMYQPSAVVLQCG R D G S K V 0 0 0 3 0 1 1 2 0 4 0 2 0 1 1 2 0 0 1 0 0 0 18 1 2024.0102 Q92769 Q92769 231 248 HDAC2 Histone deacetylase 2 yes yes 3 0.012803 69.431 By MS/MS 6.5 0.5 1 1 2 2615500 2615500 0 2310 2078 2388 5878;5879 4244 4244 1 21198 0 DGIEPMWEDEK LSSNLMPGCDYSLFKDGIEPMWEDEKNKRG SLFKDGIEPMWEDEKNKRGGRWLITLNKQQ K D G E K N 0 0 0 2 0 0 3 1 0 1 0 1 1 0 1 0 0 1 0 0 0 0 11 0 1347.5653 P06730 P06730 96 106 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 0.00067844 137.95 By MS/MS 9 0 1 1 340140 340140 0 2311 481 2389 5880 4245 4245 1 195210 0 DGIILCELINK VTGMSIGPNFQLGLKDGIILCELINKLQPG LGLKDGIILCELINKLQPGSVKKVNESSLN K D G N K L 0 0 1 1 1 0 1 1 0 3 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1286.6904 Q15417 Q15417 54 64 CNN3 Calponin-3 yes yes 2 7.1961E-05 166.07 By MS/MS 7 0 1 1 554860 554860 0 2312 1500 2390 5881 4246 4246 1 9915.5 0 DGIIVLK KPVNLGRVRDGPQWRDGIIVLKYVDGDLCP VRDGPQWRDGIIVLKYVDGDLCPDGIRKKS R D G L K Y 0 0 0 1 0 0 0 1 0 2 1 1 0 0 0 0 0 0 0 1 0 0 7 0 756.47454 P11717 P11717 1448 1454 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.036682 110.34 By MS/MS 2 0 1 1 119490 119490 0 2313 557 2391 5882 4247 4247 1 5939.2 0 DGIQLSEYLPEVK SKDSIFVKILQKLLKDGIQLSEYLPEVKDL LKDGIQLSEYLPEVKDLLQADQLGSLKSNP K D G V K D 0 0 0 1 0 1 2 1 0 1 2 1 0 0 1 1 0 0 1 1 0 0 13 0 1489.7664 Q8WUM0 Q8WUM0 1111 1123 NUP133 Nuclear pore complex protein Nup133 yes yes 2 0.0090123 96.64 By MS/MS 3 0 1 1 69211 69211 0 2314 2018 2392 5883 4248 4248 1 1806.8 0 DGKKECDIVSR FSFRSQEDLNEPIKRDGKKECDIVSRDGGA PIKRDGKKECDIVSRDGGAASPATEGRGGS R D G S R D 0 1 0 2 1 0 1 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 11 2 1305.6347 Q7Z460 Q7Z460 1207 1217 CLASP1 CLIP-associating protein 1 yes yes 3 0.027335 68.515 By MS/MS 3 0 1 1 0 0 0 2315 1790 2393 5884 4249 4249 1 0 0 DGLFDTIQR THRIHNALKGIPDDRDGLFDTIQRSKNHYQ GIPDDRDGLFDTIQRSKNHYQKRAYQCIKC R D G Q R S 0 1 0 2 0 1 0 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1063.5298 Q93008;O00507 Q93008 2367 2375 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.055667 80.455 By MS/MS 2 0 1 1 253950 253950 0 2316 2096 2394 5885 4250 4250 1 12623 0 DGLGGLPDIVR DVKIVILPDYLEIARDGLGGLPDIVRDRVT EIARDGLGGLPDIVRDRVTSAVEALLSADS R D G V R D 0 1 0 2 0 0 0 3 0 1 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1110.6033 P45974 P45974 134 144 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.01744 91.658 By MS/MS 4.5 0.5 1 1 2 500420 500420 0 2317 873 2395 5886;5887 4251 4251 1 14826 0 DGLIVYEDSPLVK RDTTVQTLTLQPSVKDGLIVYEDSPLVKAV VKDGLIVYEDSPLVKAVKLGHILVVDEADK K D G V K A 0 0 0 2 0 0 1 1 0 1 2 1 0 0 1 1 0 0 1 2 0 0 13 0 1446.7606 A3KMH1 A3KMH1 824 836 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00025597 167.09 By MS/MS 3 1.41 1 1 1 1 1 5 2520100 2520100 0 2318 13 2396 5888;5889;5890;5891;5892 4252;4253;4254;4255 4252 4 86189 0 DGLNDDDFEPYLSPQAR KGQGNKVQNGSVHQKDGLNDDDFEPYLSPQ LNDDDFEPYLSPQARPNNAYTAMSDSYLPS K D G A R P 1 1 1 4 0 1 1 1 0 0 2 0 0 1 2 1 0 0 1 0 0 0 17 0 1950.8595 Q9Y5A9 Q9Y5A9 27 43 YTHDF2 YTH domain-containing family protein 2 yes yes 2 8.0198E-25 216.27 By MS/MS 5 0 1 1 1414000 1414000 0 2319 2966 2397 5893 4256 4256 1 58121 0 DGLQLAADIASLQNR ILVPHSLRQAQASFRDGLQLAADIASLQNR DGLQLAADIASLQNRIDWGRSQLRGLQEKL R D G N R I 3 1 1 2 0 2 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 15 0 1583.8267 Q96NT0 Q96NT0 143 157 CCDC115 Coiled-coil domain-containing protein 115 yes yes 2 5.7548E-10 186.51 By MS/MS 9 0 1 1 154870 154870 0 2320 2233 2398 5894 4257 4257 1 88881 0 DGLQLLTDMK LQTFCNLAIGCHRPKDGLQLLTDMKKSQVT CHRPKDGLQLLTDMKKSQVTPNTHIYSALI K D G M K K 0 0 0 2 0 1 0 1 0 0 3 1 1 0 0 0 1 0 0 0 0 0 10 0 1132.5798 O75127 O75127 570 579 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.00074149 134.84 By MS/MS 5 0 1 1 181630 181630 0 2321 280 2399 5895 4258 4258 1 7465.8 0 DGLTDVYNK STPYGGVKLEDLIVKDGLTDVYNKIHMGSC EDLIVKDGLTDVYNKIHMGSCAENTAKKLN K D G N K I 0 0 1 2 0 0 0 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 9 0 1023.4873 P24752 P24752 182 190 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 8.5955E-05 171.53 By MS/MS 7.33 0.471 2 1 3 27071000 27071000 0 2322 680 2400 5896;5897;5898 4259;4260 4259 2 501910 0 DGLTISFTK KGLDVKSEACQRFFRDGLTISFTKILTDEA CQRFFRDGLTISFTKILTDEAVSGWKFEIH R D G T K I 0 0 0 1 0 0 0 1 0 1 1 1 0 1 0 1 2 0 0 0 0 0 9 0 980.51786 Q93008;O00507 Q93008 122 130 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.039237 85.862 By MS/MS 3 0.816 1 1 1 3 477170 477170 0 2323 2096 2401 5899;5900;5901 4261 4261 1 18074 0 DGLVSLLTTSEGADEPQR MALELMTVLVGSPRKDGLVSLLTTSEGADE VSLLTTSEGADEPQRLQFPLPTAQRSLEPG K D G Q R L 1 1 0 2 0 1 2 2 0 0 3 0 0 0 1 2 2 0 0 1 0 0 18 0 1886.9222 P51570 P51570 70 87 GALK1 Galactokinase yes yes 2 9.2443E-44 262.48 By MS/MS 7 0 1 1 1362700 1362700 0 2324 967 2402 5902 4262 4262 1 24351 0 DGNITGIQQFSK KLGLDKAVLQSMSGRDGNITGIQQFSKKEI SGRDGNITGIQQFSKKEIEDLLRKGAYAAI R D G S K K 0 0 1 1 0 2 0 2 0 2 0 1 0 1 0 1 1 0 0 0 0 0 12 0 1306.6517 Q9HCK8 Q9HCK8 1289 1300 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2 0.0022164 140.14 By MS/MS 1.5 0.5 1 1 2 371580 371580 0 2325 2561 2403 5903;5904 4263 4263 1 18286 0 DGNVLLHEMQIQHPTASLIAK MKMLVSGAGDIKLTKDGNVLLHEMQIQHPT HEMQIQHPTASLIAKVATAQDDITGDGTTS K D G A K V 2 0 1 1 0 2 1 1 2 2 3 1 1 0 1 1 1 0 0 1 0 0 21 0 2314.2104 P40227 P40227 59 79 CCT6A T-complex protein 1 subunit zeta yes yes 2;3;4 4.2056E-06 133.92 By MS/MS 6.11 0.314 8 1 9 223810000 223810000 0 2326 828 2404;2405 5905;5906;5907;5908;5909;5910;5911;5912;5913 4264;4265;4266;4267;4268;4269;4270;4271 4267 570 8 1747900 0 DGPGETDAFGNSEGK PGVSPPAAPAAPGPKDGPGETDAFGNSEGK DGPGETDAFGNSEGKELVASGENKIKQGLL K D G G K E 1 0 1 2 0 0 2 4 0 0 0 1 0 1 1 1 1 0 0 0 0 0 15 0 1479.6114 O94925 O94925 107 121 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 2.0199E-14 205.12 By MS/MS By matching 6 0 2 1 1 7921100 7901000 20130 2327 359 2406 5914;5915 4272 4272 1 61612 61737 DGPGETDAFGNSEGKELVASGENK PGVSPPAAPAAPGPKDGPGETDAFGNSEGK GNSEGKELVASGENKIKQGLLPSLEDLLFY K D G N K I 2 0 2 2 0 0 4 5 0 0 1 2 0 1 1 2 1 0 0 1 0 0 24 1 2407.0775 O94925 O94925 107 130 GLS Glutaminase kidney isoform, mitochondrial yes yes 3 0.022574 46.808 By MS/MS 6 0 1 1 8925300 8925300 0 2328 359 2407 5916 4273 4273 1 69600 0 DGPGFYTTR VAVGLKQGKVIIVVKDGPGFYTTRCLAPMM VIIVVKDGPGFYTTRCLAPMMSEVIRILQE K D G T R C 0 1 0 1 0 0 0 2 0 0 0 0 0 1 1 0 2 0 1 0 0 0 9 0 1012.4614 P40939 P40939 541 549 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0014448 135.79 By MS/MS By matching 5 0 2 1 1 11010000 10990000 19696 2329 835 2408 5917;5918 4274 4274 1 451740 58281 DGPLLAALK DLPVEGGKGGEFAWRDGPLLAALKAGHWVV GEFAWRDGPLLAALKAGHWVVLDELNLASQ R D G L K A 2 0 0 1 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 0 9 0 896.53312 Q9NU22 Q9NU22 1807 1815 MDN1 Midasin yes yes 2 0.00076791 147.34 By MS/MS 1.5 0.5 1 1 2 238080 238080 0 2330 2635 2409 5919;5920 4275 4275 1 11681 0 DGPNALTPPPTTPEWIK SRGLTSARAAEILARDGPNALTPPPTTPEW PNALTPPPTTPEWIKFCRQLFGGFSMLLWI R D G I K F 1 0 1 1 0 0 1 1 0 1 1 1 0 0 5 0 3 1 0 0 0 0 17 0 1832.9309 P05023 P05023 75 91 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 1.2226E-13 203.88 By MS/MS 3.7 1.79 1 2 2 2 1 1 1 10 14079000 14079000 0 2331 463 2410 5921;5922;5923;5924;5925;5926;5927;5928;5929;5930 4276;4277;4278;4279;4280;4281 4279 6 392980 0 DGPSLLVVEQVR SGQLPDPTTNPSAGKDGPSLLVVEQVRVVD AGKDGPSLLVVEQVRVVDLEGSLKVVYPSK K D G V R V 0 1 0 1 0 1 1 1 0 0 2 0 0 0 1 1 0 0 0 3 0 0 12 0 1310.7194 Q8N1G4 Q8N1G4 543 554 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 8.8945E-06 174.98 By MS/MS 5 0 1 1 1529800 1529800 0 2332 1901 2411 5931 4282 4282 1 62881 0 DGPVGFADFVYK CFIILSKLVELWGGKDGPVGFADFVYKHIV GGKDGPVGFADFVYKHIVPACFLAPLKQTF K D G Y K H 1 0 0 2 0 0 0 2 0 0 0 1 0 2 1 0 0 0 1 2 0 0 12 0 1313.6292 O43592 O43592 860 871 XPOT Exportin-T yes yes 2 2.7991E-11 208.63 By MS/MS 4 0 2 2 1854400 1854400 0 2333 208 2412 5932;5933 4283;4284 4283 2 50624 0 DGPVRPQNAEEEKR TRGVQKRRGGSTVPKDGPVRPQNAEEEKRG KDGPVRPQNAEEEKRGLDLRVSGYLNLAAD K D G K R G 1 2 1 1 0 1 3 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 14 2 1623.7965 Q92504 Q92504 298 311 SLC39A7 Zinc transporter SLC39A7 yes yes 3 8.167E-05 145.61 By MS/MS 7 0 1 1 2558000 2558000 0 2334 2053 2413 5934 4285 4285 1 45711 0 DGQAMLWDLNEGK VTVSPDGSLCASGGKDGQAMLWDLNEGKHL GKDGQAMLWDLNEGKHLYTLDGGDIINALC K D G G K H 1 0 1 2 0 1 1 2 0 0 2 1 1 0 0 0 0 1 0 0 0 0 13 0 1475.6715 P63244 P63244 213 225 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 9.1608E-12 203.61 By MS/MS 8 0 2 2 1191500 1191500 0 2335 1178 2414;2415 5935;5936 4286;4287 4287 918 2 78601 0 DGQILVYCLNR ALFATEDSHLSTVRRDGQILVYCLNRMSMK TVRRDGQILVYCLNRMSMKTSSWTRSQPFT R D G N R M 0 1 1 1 1 1 0 1 0 1 2 0 0 0 0 0 0 0 1 1 0 0 11 0 1349.6762 Q9NU22 Q9NU22 2457 2467 MDN1 Midasin yes yes 2 3.2004E-12 214.05 By MS/MS 1 0 1 1 521450 521450 0 2336 2635 2416 5937 4288 4288 1 25477 0 DGQLMTELFNR KSSNLERHLHLMANKDGQLMTELFNRLESQ MANKDGQLMTELFNRLESQHHFQIEKALVE K D G N R L 0 1 1 1 0 1 1 1 0 0 2 0 1 1 0 0 1 0 0 0 0 0 11 0 1322.6289 Q8IYQ7 Q8IYQ7 583 593 THNSL1 Threonine synthase-like 1 yes yes 2 0.0061077 103.08 By MS/MS 5 0 1 1 106280 106280 0 2337 1882 2417 5938 4289 4289 1 4368.7 0 DGQQIPVFK PFQRWHLDEVFLELKDGQQIPVFKLSGENG VFLELKDGQQIPVFKLSGENGDEVKKE___ K D G F K L 0 0 0 1 0 2 0 1 0 1 0 1 0 1 1 0 0 0 0 1 0 0 9 0 1030.5447 Q9GZY4 Q9GZY4 126 134 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 2 0.00051237 153.08 By MS/MS 10 0 1 1 717790 717790 0 2338 2444 2418 5939 4290 4290 1 762940 0 DGSASEVPSELSERPK LYYSRTMAKSSVDQKDGSASEVPSELSERP GSASEVPSELSERPKGFYVETVVTYKEDFV K D G P K G 1 1 0 1 0 0 3 1 0 0 1 1 0 0 2 4 0 0 0 1 0 0 16 1 1686.8061 A0A096LP01 A0A096LP01 44 59 LINC00493 yes yes 2 0.0020086 149.23 By MS/MS 10 0 1 1 274130 274130 0 2339 3 2419 5940 4291 4291 1 291370 0 DGSAVEIVGLSK ESDRARNRGIPATPRDGSAVEIVGLSKSAV TPRDGSAVEIVGLSKSAVRWLLELSKKNIF R D G S K S 1 0 0 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1173.6241 P35573 P35573 1280 1291 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0036329 112.94 By MS/MS 3 0 1 1 771150 771150 0 2340 792 2420 5941 4292 4292 1 20131 0 DGSCGVAYVVQEPGDYEVSVK VEGPSKAEISFEDRKDGSCGVAYVVQEPGD AYVVQEPGDYEVSVKFNEEHIPDSPFVVPV K D G V K F 1 0 0 2 1 1 2 3 0 0 0 1 0 0 1 2 0 0 2 5 0 0 21 0 2257.0209 P21333 P21333 2290 2310 FLNA Filamin-A yes yes 2 0.00017815 114.74 By MS/MS 2.5 0.5 1 1 2 489090 489090 0 2341 648 2421 5942;5943 4293;4294 4293 2 18971 0 DGSDVIYPAR IVFVLKDKPHNIFKRDGSDVIYPARISLRE NIFKRDGSDVIYPARISLREALCGCTVNVP R D G A R I 1 1 0 2 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 1 0 0 10 0 1091.5247 P25685 P25685 250 259 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.0032771 115.7 By MS/MS 7 0 1 1 0 0 0 2342 686 2422 5944 4295 4295 1 0 0 DGSLANNPYPGDVTK YYGIPFAAPTALASRDGSLANNPYPGDVTK DGSLANNPYPGDVTKFGRGDSASPAPATTP R D G T K F 1 0 2 2 0 0 0 2 0 0 1 1 0 0 2 1 1 0 1 1 0 0 15 0 1546.7264 Q5T6F2 Q5T6F2 854 868 UBAP2 Ubiquitin-associated protein 2 yes yes 2 0.0083721 96.82 By MS/MS 3 0 1 1 538600 538600 0 2343 1630 2423 5945 4296 4296 1 14060 0 DGSLASNPYSGDLTK YSIPFPTPTTPLTGRDGSLASNPYSGDLTK DGSLASNPYSGDLTKFGRGDASSPAPATTL R D G T K F 1 0 1 2 0 0 0 2 0 0 2 1 0 0 1 3 1 0 1 0 0 0 15 0 1523.7104 Q14157 Q14157 850 864 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 1.4258E-14 255.54 By MS/MS 3.5 1.12 1 1 1 1 4 3732900 3732900 0 2344 1411 2424 5946;5947;5948;5949 4297 4297 1 101480 0 DGSSGGVIR CLQFTANALALAMERDGSSGGVIRLAAIAE ALAMERDGSSGGVIRLAAIAESGVERQVLL R D G I R L 0 1 0 1 0 0 0 3 0 1 0 0 0 0 0 2 0 0 0 1 0 0 9 0 846.41954 P28072 P28072 201 209 PSMB6 Proteasome subunit beta type-6 yes yes 2 0.0025322 124.08 By MS/MS 9 0 1 1 1504800 1504800 0 2345 714 2425 5950 4298 4298 1 863600 0 DGSTTAGNSSQVSDGAAAILLAR TTMEGLAKLKPAFKKDGSTTAGNSSQVSDG SSQVSDGAAAILLARRSKAEELGLPILGVL K D G A R R 5 1 1 2 0 1 0 3 0 1 2 0 0 0 0 4 2 0 0 1 0 0 23 0 2161.0611 P09110 P09110 267 289 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2;3 8.5692E-31 212.32 By MS/MS 7.33 0.471 2 1 3 2892200 2892200 0 2346 511 2426 5951;5952;5953 4299;4300 4299 2 66661 0 DGSVAIASKPR GTLVQEGGSPIKYNKDGSVAIASKPREVRE KYNKDGSVAIASKPREVREFNGQHFILEEA K D G P R E 2 1 0 1 0 0 0 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 11 1 1099.5986 P55809 P55809 177 187 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2;3 0.004236 152.54 By MS/MS By matching 6.6 0.8 3 1 1 4 1 14119000 14081000 38621 2347 1038 2427 5954;5955;5956;5957;5958 4301;4302 4301 2 123000 118450 DGSVLVPPALQSYLGTDR VPRLLIALLESNQQKDGSVLVPPALQSYLG VLVPPALQSYLGTDRITAPTHVPLQYIGPN K D G D R I 1 1 0 2 0 1 0 2 0 0 3 0 0 0 2 2 1 0 1 2 0 0 18 0 1886.9738 Q9NP81 Q9NP81 472 489 SARS2 Serine--tRNA ligase, mitochondrial yes yes 2 0.0093324 91.914 By MS/MS 6 0 1 1 846090 846090 0 2348 2576 2428 5959 4303 4303 1 6597.8 0 DGTFDPDNLEK LFSEAVAPAIEKDFKDGTFDPDNLEKYGFE KDFKDGTFDPDNLEKYGFEPTQEGKLFQLY K D G E K Y 0 0 1 3 0 0 1 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 11 0 1249.5463 Q8IXM3 Q8IXM3 106 116 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.00049419 142.98 By MS/MS 10 0 1 1 1318600 1318600 0 2349 1873 2429 5960 4304 4304 1 1401500 0 DGTFVISKT VLKEFHKQITARATKDGTFVISKT______ TARATKDGTFVISKT_______________ K D G K T - 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 2 0 0 1 0 0 9 1 966.50221 Q8WUK0 Q8WUK0 193 201 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.042583 102.62 By MS/MS 9 0 1 1 598900 598900 0 2350 2017 2430 5961 4305 4305 1 343720 0 DGTIDFTPGSELLITK NINQGSITFAGGPGRDGTIDFTPGSELLIT GTIDFTPGSELLITKAKNGHLAVVAPRLNS R D G T K A 0 0 0 2 0 0 1 2 0 2 2 1 0 1 1 1 3 0 0 0 0 0 16 0 1705.8774 O00159 O00159 1032 1047 MYO1C Unconventional myosin-Ic yes yes 2 1.1586E-39 269.81 By MS/MS 4 0.707 1 2 1 4 6061400 6061400 0 2351 72 2431 5962;5963;5964;5965 4306;4307 4306 2 166710 0 DGTQCLSGSSDGTIR LKGHTDNVKALLLNRDGTQCLSGSSDGTIR DGTQCLSGSSDGTIRLWSLGQQRCIATYRV R D G I R L 0 1 0 2 1 1 0 3 0 1 1 0 0 0 0 3 2 0 0 0 0 0 15 0 1552.6787 Q8TAF3 Q8TAF3 221 235 WDR48 WD repeat-containing protein 48 yes yes 2 9.9841E-50 276.12 By MS/MS 5 0 1 1 528440 528440 0 2352 1981 2432 5966 4308 4308 1 21721 0 DGVTVAK TVIIEQSWGSPKVTKDGVTVAKSIDLKDKY WGSPKVTKDGVTVAKSIDLKDKYKNIGAKL K D G A K S 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 2 0 0 7 0 688.37555 P10809 P10809 76 82 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.013234 145.04 By MS/MS By MS/MS 7 1.41 4 1 1 1 5 2 62248000 61969000 279190 2353 544 2433 5967;5968;5969;5970;5971;5972;5973 4309;4310 4310 2 718210 856250 DGVWNLQNEVTK ILPKCRTSYEEFTHKDGVWNLQNEVTKERT THKDGVWNLQNEVTKERTAQCFLRVDDESM K D G T K E 0 0 2 1 0 1 1 1 0 0 1 1 0 0 0 0 1 1 0 2 0 0 12 0 1401.6888 Q6P2Q9 Q6P2Q9 1211 1222 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 5.8616E-11 202.31 By MS/MS 2 0.816 1 1 1 3 936670 936670 0 2354 1706 2434 5974;5975;5976 4311;4312 4312 2 33169 0 DGVYVLDLAAK LYFTYLEINPLVVTKDGVYVLDLAAKVDAT VVTKDGVYVLDLAAKVDATADYICKVKWGD K D G A K V 2 0 0 2 0 0 0 1 0 0 2 1 0 0 0 0 0 0 1 2 0 0 11 0 1162.6234 P53396 P53396 210 220 ACLY ATP-citrate synthase yes yes 2 2.3641E-05 173.37 By MS/MS 4.3 2.1 1 1 2 2 1 1 1 1 10 27622000 27622000 0 2355 1001 2435 5977;5978;5979;5980;5981;5982;5983;5984;5985;5986 4313;4314;4315;4316;4317;4318 4315 6 785270 0 DGWQVEEADDWLR YGIRYEYGIFNQKIRDGWQVEEADDWLRYG IRDGWQVEEADDWLRYGNPWEKSRPEFMLP R D G L R Y 1 1 0 3 0 1 2 1 0 0 1 0 0 0 0 0 0 2 0 1 0 0 13 0 1617.7059 P06737 P06737 173 185 PYGL Glycogen phosphorylase, liver form yes yes 2 0.00011343 154.28 By MS/MS 4 0 1 1 144040 144040 0 2356 483 2436 5987 4319 4319 1 3932.1 0 DGWSLWYSEYR TLSVALPYFWEHFDKDGWSLWYSEYRFPEE HFDKDGWSLWYSEYRFPEELTQTFMSCNLI K D G Y R F 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 2 0 2 2 0 0 0 11 0 1460.6361 P26641 P26641 317 327 EEF1G Elongation factor 1-gamma yes yes 2 7.3474E-07 182.65 By MS/MS 6 0 1 1 1010400 1010400 0 2357 700 2437 5988 4320 4320 1 7879.4 0 DGYQATTQGQLK LKWSEDVCVAHLTQRDGYQATTQGQLKEQL TQRDGYQATTQGQLKEQLYQEIIHYFDKGK R D G L K E 1 0 0 1 0 3 0 2 0 0 1 1 0 0 0 0 2 0 1 0 0 0 12 0 1308.631 Q14185 Q14185 1262 1273 DOCK1 Dedicator of cytokinesis protein 1 yes yes 2 0.0014818 127.83 By MS/MS 2 0 1 1 112870 112870 0 2358 1417 2438 5989 4321 4321 1 5610.1 0 DHAISLSEPR PNSSESFEHIARSARDHAISLSEPRMLWGS ARSARDHAISLSEPRMLWGSDPYPHAEPQQ R D H P R M 1 1 0 1 0 0 1 0 1 1 1 0 0 0 1 2 0 0 0 0 0 0 10 0 1123.5622 Q9Y520 Q9Y520 795 804 PRRC2C Protein PRRC2C yes yes 2 0.00011045 164.46 By MS/MS 1.5 0.5 1 1 2 642680 642680 0 2359 2963 2439 5990;5991 4322 4322 1 31513 0 DHEDYDPQTVR ENLATYMESMRLYARDHEDYDPQTVRLGSR LYARDHEDYDPQTVRLGSRYSHVQEVQERL R D H V R L 0 1 0 3 0 1 1 0 1 0 0 0 0 0 1 0 1 0 1 1 0 0 11 0 1373.5848 Q93008 Q93008 633 643 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 2.3641E-05 173.37 By MS/MS 3 1.41 1 1 1 1 1 5 1173700 1173700 0 2360 2096 2440 5992;5993;5994;5995;5996 4323 4323 1 49676 0 DHGLLIYHIPQVEPR VKQHKRLTQAIQKARDHGLLIYHIPQVEPR DHGLLIYHIPQVEPRDLDFSTSHGAVSATP R D H P R D 0 1 0 1 0 1 1 1 2 2 2 0 0 0 2 0 0 0 1 1 0 0 15 0 1785.9526 Q9Y676 Q9Y676 159 173 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 3 0.002034 108.97 By MS/MS 8 0 1 1 1155400 1155400 0 2361 2995 2441 5997 4324 4324 1 76224 0 DHLVQMLSR YAVGGSGVSATPAQRDHLVQMLSRNLEGHH ATPAQRDHLVQMLSRNLEGHHQIAAACFLP R D H S R N 0 1 0 1 0 1 0 0 1 0 2 0 1 0 0 1 0 0 0 1 0 0 9 0 1097.5652 Q86UT6 Q86UT6 348 356 NLRX1 NLR family member X1 yes yes 2 0.0077549 101.9 By MS/MS 4 0 1 1 436770 436770 0 2362 1825 2442 5998 4325 4325 1270 1 11923 0 DHNVEFR IIKEVLLEAQDMAVRDHNVEFRSNLYIAES EAQDMAVRDHNVEFRSNLYIAESTSGRGQC R D H F R S 0 1 1 1 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 7 0 915.41988 Q9NWU5 Q9NWU5 125 131 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.024519 113.41 By MS/MS 9 0 1 1 1235800 1235800 0 2363 2670 2443 5999 4326 4326 1 709260 0 DHPALNYNIVSGPPSHK IEEWQPEPLVPPVPKDHPALNYNIVSGPPS PALNYNIVSGPPSHKTVVNGKECINFASFN K D H H K T 1 0 2 1 0 0 0 1 2 1 1 1 0 0 3 2 0 0 1 1 0 0 17 0 1844.9169 O15269 O15269 76 92 SPTLC1 Serine palmitoyltransferase 1 yes yes 2;3 1.0295E-13 199.38 By MS/MS 6 0 2 2 32701000 32701000 0 2364 165 2444 6000;6001 4327;4328 4327 2 255010 0 DHPLPEVAHVK VKSEDFSLPAYMDRRDHPLPEVAHVKHLSA MDRRDHPLPEVAHVKHLSASQKALKEKEKA R D H V K H 1 0 0 1 0 0 1 0 2 0 1 1 0 0 2 0 0 0 0 2 0 0 11 0 1240.6564 P13073 P13073 43 53 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.0017495 117.53 By MS/MS 10 0 1 1 475300 475300 0 2365 571 2445 6002 4329 4329 1 505190 0 DHQYQFLEDAVR CDTLTCRDCQLNAHKDHQYQFLEDAVRNQR AHKDHQYQFLEDAVRNQRKLLASLVKRLGD K D H V R N 1 1 0 2 0 2 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 12 0 1519.7056 Q13263 Q13263 239 250 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 1.4386E-07 191.33 By MS/MS 4.5 0.5 2 2 4 3962300 3962300 0 2366 1351 2446 6003;6004;6005;6006 4330;4331 4330 2 116490 0 DHTNAQFK CIHPDGVIPVLTFLRDHTNAQFKSLVDLTA PVLTFLRDHTNAQFKSLVDLTAVDVPTRQN R D H F K S 1 0 1 1 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 8 0 959.44609 O75489 O75489 102 109 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.0015705 163.67 By MS/MS 8 0 1 1 3445500 3445500 0 2367 313 2447 6007 4332 4332 1 227300 0 DHVVSDFSEHGSLK GLEGLLTTKWLLRGKDHVVSDFSEHGSLKY KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ K D H L K Y 0 0 0 2 0 0 1 1 2 0 1 1 0 1 0 3 0 0 0 2 0 0 14 0 1555.7267 P54886 P54886 768 781 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 0.0042591 98 By MS/MS 5.5 0.5 1 1 2 2554100 2554100 0 2368 1019 2448 6008;6009 4333 4333 1 61389 0 DHYEATAMHR IAVMLLEGGANPDAKDHYEATAMHRAAAKG NPDAKDHYEATAMHRAAAKGNLKMIHILLY K D H H R A 2 1 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 0 1 0 0 0 10 0 1229.5248 O75832 O75832 136 145 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 3 0.017777 83.499 By MS/MS 9 0 1 1 288490 288490 0 2369 332 2449 6010 4334 4334 1 165570 0 DIALSLPQLPR TLDTCLKLDDTVYLRDIALSLPQLPRELPS VYLRDIALSLPQLPRELPSSHTNAKVAEVL R D I P R E 1 1 0 1 0 1 0 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1221.7081 Q9NYY8 Q9NYY8 557 567 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.0008581 135.55 By MS/MS 6 0 1 1 1960700 1960700 0 2370 2701 2450 6011 4335 4335 1 15290 0 DIATIVADK VSDKERHTQLEQMFRDIATIVADKCVNPET LEQMFRDIATIVADKCVNPETKRPYTVILI R D I D K C 2 0 0 2 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 9 0 944.51786 Q9Y3A5 Q9Y3A5 110 118 SBDS Ribosome maturation protein SBDS yes yes 2 0.008925 107.15 By MS/MS 8 0 1 1 1425800 1425800 0 2371 2922 2451 6012 4336 4336 1 94060 0 DICNDVLSLLEK QMAREYREKIETELRDICNDVLSLLEKFLI ELRDICNDVLSLLEKFLIPNASQAESKVFY R D I E K F 0 0 1 2 1 0 1 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1417.7123 P63104 P63104 92 103 YWHAZ 14-3-3 protein zeta/delta yes yes 2 0.0013926 128.85 By MS/MS 8 0 1 1 78260 78260 0 2372 1169 2452 6013 4337;4338 4338 2 5162.8 0 DIDAFWLQR SGELMSSKKKDLHPRDIDAFWLQRQLSRFY KDLHPRDIDAFWLQRQLSRFYDDAIVSQKK R D I Q R Q 1 1 0 2 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 9 0 1162.5771 O75643 O75643 262 270 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.00021214 182.39 By MS/MS 3.67 1.97 1 1 1 1 1 1 6 532760 532760 0 2373 322 2453 6014;6015;6016;6017;6018;6019 4339;4340 4340 2 18344 0 DIDENAYAK CDLLMEIEQVDMLEKDIDENAYAKVCLYLT VDMLEKDIDENAYAKVCLYLTSCVNYVPEP K D I A K V 2 0 1 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1037.4666 Q13200 Q13200 220 228 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.00028226 158.76 By MS/MS 4.5 0.5 1 1 2 938540 938540 0 2374 1347 2454 6020;6021 4341 4341 1 27597 0 DIDEVSSLLR EILPNLVCCSAKNLRDIDEVSSLLRTSIMS AKNLRDIDEVSSLLRTSIMSKQYGNEVFLA R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 P50990 P50990 156 165 CCT8 T-complex protein 1 subunit theta yes yes 2 7.8072E-11 208.37 By MS/MS By MS/MS 6.07 2.25 1 1 1 1 4 3 1 1 1 13 1 154350000 154270000 77073 2375 955 2455 6022;6023;6024;6025;6026;6027;6028;6029;6030;6031;6032;6033;6034;6035 4342;4343;4344;4345;4346;4347;4348;4349;4350;4351;4352;4353 4346 12 4603400 236380 DIDIHEVR MKVTEKIPVRHLYTKDIDIHEVRIGWSLTT VRHLYTKDIDIHEVRIGWSLTTSGMLLGEE K D I V R I 0 1 0 2 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 8 0 995.50361 Q00839 Q00839 353 360 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.010322 119.27 By MS/MS 4.5 0.5 1 1 2 1815900 1815900 0 2376 1238 2456 6036;6037 4354 4354 1 51993 0 DIDILIVR VIHCKSLPGVVTRHKDIDILIVRENTEGEY GVVTRHKDIDILIVRENTEGEYSSLEHESV K D I V R E 0 1 0 2 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 1 0 0 8 0 955.57023 P51553 P51553 160 167 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 2 0.0033279 147.52 By MS/MS 7.5 0.5 1 1 2 862070 862070 0 2377 966 2457 6038;6039 4355 4355 1 19151 0 DIDPQNDLTFLR SLMHSFILKARSTVRDIDPQNDLTFLRIRS TVRDIDPQNDLTFLRIRSKKNEIMVAPDKD R D I L R I 0 1 1 3 0 1 0 0 0 1 2 0 0 1 1 0 1 0 0 0 0 0 12 0 1445.7151 Q9NP97;Q8TF09 Q9NP97 59 70 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 2 0.00030715 147.62 By MS/MS 10 0 1 1 759890 759890 0 2378 2007 2458 6040 4356 4356 1 807680 0 DIDSFVPSK TQVKGTGPDGRITKKDIDSFVPSKVAPAPA GRITKKDIDSFVPSKVAPAPAAVVPPTGPG K D I S K V 0 0 0 2 0 0 0 0 0 1 0 1 0 1 1 2 0 0 0 1 0 0 9 0 1006.4971 P10515 P10515 388 396 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.0055661 126.24 By MS/MS 5 0 1 1 0 0 0 2379 538 2459 6041 4357 4357 1 0 0 DIEAMDPSILK LVFSFNEKLFGLLVKDIEAMDPSILKGEPA LLVKDIEAMDPSILKGEPATGKRQKIEVGL K D I L K G 1 0 0 2 0 0 1 0 0 2 1 1 1 0 1 1 0 0 0 0 0 0 11 0 1230.6166 P46459 P46459 151 161 NSF Vesicle-fusing ATPase yes yes 2 3.5591E-05 171.56 By MS/MS 5 0 1 1 883210 883210 0 2380 881 2460 6042 4358 4358 1 36303 0 DIEEIIDELK MVQINDNYYEDLTAKDIEEIIDELKAGKIP DLTAKDIEEIIDELKAGKIPKPGPRSGRFS K D I L K A 0 0 0 2 0 0 3 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1215.6234 P19404 P19404 200 209 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 2 0.00045592 146.69 By MS/MS 9 0 1 1 105420 105420 0 2381 633 2461 6043 4359 4359 1 60499 0 DIELSPEAQAK VDKIRTIAQAVYGAKDIELSPEAQAKIDRY YGAKDIELSPEAQAKIDRYTQQGFGNLPIC K D I A K I 2 0 0 1 0 1 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 11 0 1199.6034 Q6UB35 Q6UB35 881 891 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0003538 148.69 By MS/MS By matching 4.33 0.471 2 1 2 1 10981000 10688000 293190 2382 1726 2462 6044;6045;6046 4360 4360 1 300500 612640 DIENQYETQITQIEHEVSSSGQEVQSSAK DMRQEYEQLIAKNRKDIENQYETQITQIEH HEVSSSGQEVQSSAKEVTQLRHGVQELEIE K D I A K E 1 0 1 1 0 5 5 1 1 3 0 1 0 0 0 5 2 0 1 2 0 0 29 0 3263.5066 P35527;CON__P35527 P35527 340 368 KRT9 Keratin, type I cytoskeletal 9 yes no 3 1.8456E-05 77.03 By MS/MS 9 0 1 1 279150 0 279150 + 2383 791 2463 6047 4361;4362;4363 4363 3 0 3008500 DIEREDIEFICK LALHFLNKMKIMVIKDIEREDIEFICKTIG VIKDIEREDIEFICKTIGTKPVAHIDQFTA K D I C K T 0 1 0 2 1 0 3 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 12 1 1565.7396 P50991 P50991 327 338 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.00093499 128.68 By MS/MS 6.67 1.49 1 1 2 2 2 1 9 102120000 102120000 0 2384 956 2464 6048;6049;6050;6051;6052;6053;6054;6055;6056 4364;4365;4366;4367 4365 4 979880 0 DIFDQLAK EDIAKIKKFSKTRSKDIFDQLAKSLAPSIH FSKTRSKDIFDQLAKSLAPSIHGHDYVKKA K D I A K S 1 0 0 2 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 948.49165 P25205 P25205 294 301 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.022336 103.74 By MS/MS By matching 4 0 2 1 1 318230 254370 63860 2385 683 2465 6057;6058 4368 4368 1 6944 133440 DIFEEDNYSPIPVVNEEEYK QYNETLLKKWAGVFRDIFEEDNYSPIPVVN DNYSPIPVVNEEEYKIVISKFPFQDPDLEK R D I Y K I 0 0 2 2 0 0 5 0 0 2 0 1 0 1 2 1 0 0 2 2 0 0 20 0 2428.0958 Q8TAG9 Q8TAG9 438 457 EXOC6 Exocyst complex component 6 yes yes 2 0.012884 71.08 By MS/MS 4 0 1 1 197480 197480 0 2386 1982 2466 6059 4369 4369 1 5391.1 0 DIFLASASCDGSVR RGHDAPVLSLSFDPKDIFLASASCDGSVRV KDIFLASASCDGSVRVWQISDQTCAISWPL K D I V R V 2 1 0 2 1 0 0 1 0 1 1 0 0 1 0 3 0 0 0 1 0 0 14 0 1496.6929 O75717 O75717 148 161 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 3.9311E-08 187.85 By MS/MS 3 0 1 1 672670 672670 0 2387 325 2467 6060 4370 4370 1 17560 0 DIGEGNLSTAAAAALAAAAVK EVVESEGERKTKVERDIGEGNLSTAAAAAL LSTAAAAALAAAAVKAKHLAAVEERKIKSL R D I V K A 9 0 1 1 0 0 1 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 21 0 1883.9953 Q8TAQ2 Q8TAQ2 852 872 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 2 0.0015428 86.539 By MS/MS 3 0 1 1 114650 114650 0 2388 1983 2468 6061 4371 4371 1 2993 0 DIGTNLPTLLWK CEIWLTSEDTGAYGRDIGTNLPTLLWKLVE YGRDIGTNLPTLLWKLVEVIPEGAMLRLGM R D I W K L 0 0 1 1 0 0 0 1 0 1 3 1 0 0 1 0 2 1 0 0 0 0 12 0 1369.7606 Q5VV42 Q5VV42 266 277 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 3.7195E-11 206.73 By MS/MS 6 0 1 1 2724000 2724000 0 2389 1652 2469 6062 4372 4372 1 21242 0 DIIALNPLYR EEVKALTAEIVKTIRDIIALNPLYRESVLQ VKTIRDIIALNPLYRESVLQMMQAGQRVVD R D I Y R E 1 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 0 10 0 1186.671 P36776 P36776 302 311 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.0010678 120.31 By MS/MS 4.5 0.5 1 1 2 1618900 1618900 0 2390 809 2470 6063;6064 4373 4373 1 45635 0 DIICQIAYAR YNTPKYRMIVRVTNRDIICQIAYARIEGDM RVTNRDIICQIAYARIEGDMIVCAAYAHEL R D I A R I 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1221.6176 P46777 P46777 59 68 RPL5 60S ribosomal protein L5 yes yes 2 0.00097796 123.88 By MS/MS 8 0 1 1 1259800 1259800 0 2391 885 2471 6065 4374 4374 1 83110 0 DIIFAIK PYAKILEDNSIPQVKDIIFAIKKTLNI___ DNSIPQVKDIIFAIKKTLNI__________ K D I I K K 1 0 0 1 0 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 7 0 818.49019 P11177 P11177 348 354 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.021238 122.98 By MS/MS 7.5 0.5 1 1 2 4060600 4060600 0 2392 549 2472 6066;6067 4375;4376 4376 2 158520 0 DIIGVAETGSGK TPIQRQAIPIGLQNRDIIGVAETGSGKTAA QNRDIIGVAETGSGKTAAFLIPLLVWITTL R D I G K T 1 0 0 1 0 0 1 3 0 2 0 1 0 0 0 1 1 0 0 1 0 0 12 0 1145.5928 Q9BUQ8 Q9BUQ8 430 441 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.0015804 126.71 By MS/MS 4.5 0.5 1 1 2 1025500 1025500 0 2393 2366 2473 6068;6069 4377 4377 1 32542 0 DIILGMEISAPSQQR KNNVNVASLTQSEIRDIILGMEISAPSQQR DIILGMEISAPSQQRQQIAEIEKQTKEQSQ R D I Q R Q 1 1 0 1 0 2 1 1 0 3 1 0 1 0 1 2 0 0 0 0 0 0 15 0 1656.8505 Q6P2Q9 Q6P2Q9 2009 2023 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 3.3418E-06 153.54 By MS/MS 2 0 1 1 312110 312110 0 2394 1706 2474 6070 4378 4378 1220 1 15514 0 DIINEEEVQFLK GDAFPELKKDPDMVKDIINEEEVQFLKTLS MVKDIINEEEVQFLKTLSRGRRILDRKIQS K D I L K T 0 0 1 1 0 1 3 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1475.7508 P49588 P49588 373 384 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 2.4179E-24 247.96 By MS/MS 4.5 1.12 1 1 1 1 4 2913900 2913900 0 2395 921 2475 6071;6072;6073;6074 4379;4380 4379 2 81334 0 DIISELLTSDDMK MNYFPLAPFNQLLQKDIISELLTSDDMKNA QKDIISELLTSDDMKNAYKLHTLDTCLKLD K D I M K N 0 0 0 3 0 0 1 0 0 2 2 1 1 0 0 2 1 0 0 0 0 0 13 0 1478.7174 Q9NYY8 Q9NYY8 523 535 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 3.3161E-41 261.35 By MS/MS 6 0 1 1 0 0 0 2396 2701 2476 6075 4381 4381 1 0 0 DIISIAEDEDLR HLKKPGGFDISLFYRDIISIAEDEDLRVHF FYRDIISIAEDEDLRVHFEESSKLEDLLRK R D I L R V 1 1 0 3 0 0 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1387.6831 P12956 P12956 219 230 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 4.5031E-07 206.49 By MS/MS 5 0 1 1 2846000 2846000 0 2397 569 2477 6076 4382 4382 1 116980 0 DIIVIGNDITYR AWKMTFKSPEYPEGRDIIVIGNDITYRIGS EGRDIIVIGNDITYRIGSFGPQEDLLFLRA R D I Y R I 0 1 1 2 0 0 0 1 0 4 0 0 0 0 0 0 1 0 1 1 0 0 12 0 1390.7456 Q13085 Q13085 1676 1687 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 0.019921 85.963 By MS/MS 1 0 1 1 52924 52924 0 2398 1332 2478 6077 4383 4383 1 2585.7 0 DIKDTTVGTLSQR GAEEAEEVGVEHLLRDIKDTTVGTLSQRIT LRDIKDTTVGTLSQRITNQVHGLKGLNSKL R D I Q R I 0 1 0 2 0 1 0 1 0 1 1 1 0 0 0 1 3 0 0 1 0 0 13 1 1432.7522 P51665 P51665 178 190 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2;3 8.1649E-11 201.38 By MS/MS By matching 7 0 3 2 1 38415000 38369000 45351 2399 975 2479 6078;6079;6080 4384;4385;4386 4385 3 685660 186170 DIKPQNLLLDPDTAVLK FRSLAYIHSFGICHRDIKPQNLLLDPDTAV KPQNLLLDPDTAVLKLCDFGSAKQLVRGEP R D I L K L 1 0 1 3 0 1 0 0 0 1 4 2 0 0 2 0 1 0 0 1 0 0 17 1 1892.0619 P49841 P49841 181 197 GSK3B Glycogen synthase kinase-3 beta yes yes 3 0.0080561 80.488 By MS/MS 7 0 1 1 248540 248540 0 2400 937 2480 6081 4387 4387 1 4441.5 0 DILETHLR VCVNLMKALKMSPYKDILETHLREKITAQS LKMSPYKDILETHLREKITAQSIEELCAVN K D I L R E 0 1 0 1 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 995.53999 P78527 P78527 1413 1420 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.008849 122.74 By MS/MS 1.5 0.5 1 1 2 504160 504160 0 2401 1197 2481 6082;6083 4388 4388 1 24716 0 DILIDPIR LFSATFRKKIEKLARDILIDPIRVVQGDIG KIEKLARDILIDPIRVVQGDIGEANEDVTQ R D I I R V 0 1 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 0 8 0 953.55458 Q86XP3 Q86XP3 451 458 DDX42 ATP-dependent RNA helicase DDX42 yes yes 2 0.042463 94.302 By MS/MS 4 0 1 1 421360 421360 0 2402 1842 2482 6084 4389 4389 1 11503 0 DILIEHYK QYADALHPEIFSTARDILIEHYKYPEGIRK EIFSTARDILIEHYKYPEGIRKYDYNPSFA R D I Y K Y 0 0 0 1 0 0 1 0 1 2 1 1 0 0 0 0 0 0 1 0 0 0 8 0 1029.5495 Q9H857 Q9H857 95 102 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.022336 103.74 By MS/MS By matching 6 0 2 1 1 6701300 6568800 132520 2403 2522 2483 6085;6086 4390 4390 1 51224 406440 DILIQYDR YYQKYVDEASKKEIKDILIQYDRTLLVADP ASKKEIKDILIQYDRTLLVADPRRCESKKF K D I D R T 0 1 0 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1034.5397 P62249 P62249 110 117 RPS16 40S ribosomal protein S16 yes yes 2 0.030469 98.582 By MS/MS By matching 10 0 2 1 1 7009400 6950100 59277 2404 1120 2484 6087;6088 4391 4391 1 7387200 1520400 DILLQQQQQLGHGGPEAAPR AAASAAAKPPPLSAKDILLQQQQQLGHGGP QQQQLGHGGPEAAPRAPQALERYPLAAAAE K D I P R A 2 1 0 1 0 5 1 3 1 1 3 0 0 0 2 0 0 0 0 0 0 0 20 0 2155.1134 Q7Z5L9 Q7Z5L9 90 109 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0065825 81.016 By MS/MS 5 0 1 1 1500400 1500400 0 2405 1801 2485 6089 4392 4392 1 61672 0 DILLRPELEELR DHTVCHLLFANQTEKDILLRPELEELRNKH TEKDILLRPELEELRNKHSARFKLWYTLDR K D I L R N 0 2 0 1 0 0 3 0 0 1 4 0 0 0 1 0 0 0 0 0 0 0 12 1 1494.8406 P00387 P00387 215 226 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 3 0.033414 67.456 By MS/MS 8 0 1 1 1018900 1018900 0 2406 427 2486 6090 4393 4393 1 67217 0 DILPCLDGYLK WSIYIDRHVMQPYYKDILPCLDGYLKTSAL PYYKDILPCLDGYLKTSALSDETKNNWEVS K D I L K T 0 0 0 2 1 0 0 1 0 1 3 1 0 0 1 0 0 0 1 0 0 0 11 0 1305.6639 P78527 P78527 791 801 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0079111 100.25 By MS/MS 2 0.816 1 1 1 3 501440 501440 0 2407 1197 2487 6091;6092;6093 4394 4394 1 19936 0 DILTAIAADLCK QQLEALRRMVQEREKDILTAIAADLCKSEF REKDILTAIAADLCKSEFNVYSQEVITVLG K D I C K S 3 0 0 2 1 0 0 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1302.6853 P51648 P51648 40 51 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 1.72E-16 219.72 By MS/MS 6 0 1 1 1607400 1607400 0 2408 972 2488 6094 4395 4395 1 12535 0 DILVLPLDLTDTGSHEAATK RVKRRCLENGNLKEKDILVLPLDLTDTGSH PLDLTDTGSHEAATKAVLQEFGRIDILVNN K D I T K A 2 0 0 3 0 0 1 1 1 1 4 1 0 0 1 1 3 0 0 1 0 0 20 0 2108.1001 Q9Y394 Q9Y394 104 123 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 2;3 0.0004244 115.09 By MS/MS 7.5 0.5 2 2 4 2114400 2114400 0 2409 2919 2489 6095;6096;6097;6098 4396;4397;4398 4398 3 98455 0 DILYVFQGIDGK DTGGTMEITEAALVRDILYVFQGIDGKNIK LVRDILYVFQGIDGKNIKMNNTENCYKVEG R D I G K N 0 0 0 2 0 1 0 2 0 2 1 1 0 1 0 0 0 0 1 1 0 0 12 0 1366.7133 Q96CW5 Q96CW5 253 264 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 8.5261E-05 158.31 By MS/MS 4 0 1 1 283250 283250 0 2410 2143 2490 6099 4399 4399 1 7732.3 0 DIMLATGK GAQLCTVYYASLNFRDIMLATGKLSPDAIP YASLNFRDIMLATGKLSPDAIPGKWTSQDS R D I G K L 1 0 0 1 0 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 8 0 847.44734 P49327 P49327 1575 1582 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.016636 101.43 By MS/MS 1.5 0.5 1 1 2 2149800 2149800 0 2411 915 2491 6100;6101 4400 4400 653 1 106720 0 DIMTPLVALLK SACGGFEVCDDMVTKDIMTPLVALLKECSA MVTKDIMTPLVALLKECSAGLDSNEMSLQE K D I L K E 1 0 0 1 0 0 0 0 0 1 3 1 1 0 1 0 1 0 0 1 0 0 11 0 1212.7152 Q7Z4Q2 Q7Z4Q2 122 132 HEATR3 HEAT repeat-containing protein 3 yes yes 2 0.010805 93.143 By MS/MS 5 0 1 1 42111 42111 0 2412 1795 2492 6102 4401 4401 1260 1 1730.9 0 DINAVAASLRK AAFAVKLFKSWINEKDINAVAASLRKVSMD INEKDINAVAASLRKVSMDNRLMELFPANK K D I R K V 3 1 1 1 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 11 1 1156.6564 Q7L1Q6 Q7L1Q6 198 208 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.03353 99.568 By MS/MS 7.5 0.5 1 1 2 3592300 3592300 0 2413 1762 2493 6103;6104 4402 4402 1 103560 0 DINAVLIDMER SALNLAKNIGLTKARDINAVLIDMERQGDV TKARDINAVLIDMERQGDVYRQGTTPPIWH R D I E R Q 1 1 1 2 0 0 1 0 0 2 1 0 1 0 0 0 0 0 0 1 0 0 11 0 1287.6493 P55265 P55265 329 339 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 2 0.0044415 110.08 By MS/MS 3.5 0.5 1 1 2 258640 258640 0 2414 1032 2494 6105;6106 4403 4403 1 7009 0 DINELNLPK GSSKKASAAQLRIQKDINELNLPKTCDISF QLRIQKDINELNLPKTCDISFSDPDDLLNF K D I P K T 0 0 2 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 9 0 1054.5659 P61081 P61081 37 45 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.00027426 159.28 By MS/MS 9.5 0.5 1 1 2 1454200 1454200 0 2415 1086 2495 6107;6108 4404;4405 4404 2 967290 0 DINLQDEDWNEFNDINK NMAIPGGPKFEPLVRDINLQDEDWNEFNDI NLQDEDWNEFNDINKIIIRQPIRTEYKIAF R D I N K I 0 0 4 4 0 1 2 0 0 2 1 1 0 1 0 0 0 1 0 0 0 0 17 0 2120.9287 Q6P2Q9 Q6P2Q9 285 301 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 2.0034E-10 186.69 By MS/MS 2.5 0.5 1 1 2 199040 199040 0 2416 1706 2496 6109;6110 4406 4406 1 8302 0 DIPGLTDTTVPR NLSVLNLVIVKKGEKDIPGLTDTTVPRRLG GEKDIPGLTDTTVPRRLGPKRASRIRKLFN K D I P R R 0 1 0 2 0 0 0 1 0 1 1 0 0 0 2 0 3 0 0 1 0 0 12 0 1283.6721 P62753 P62753 120 131 RPS6 40S ribosomal protein S6 yes yes 2 0.047063 75.387 By MS/MS By matching 8.75 0.829 2 1 1 3 1 11804000 11653000 150930 2417 1143 2497 6111;6112;6113;6114 4407 4407 1 869190 1287600 DIPNENEAQFQIR EDGKMDRQMFLATWKDIPNENEAQFQIRDC WKDIPNENEAQFQIRDCPLNAEAASSKLQS K D I I R D 1 1 2 1 0 2 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 13 0 1572.7532 Q10567 Q10567 852 864 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.00054669 136.96 By MS/MS 4 0 1 1 1000900 1000900 0 2418 1300 2498 6115 4408 4408 1 27323 0 DIPVLVATDVAAR DQSERNKVISDFKKKDIPVLVATDVAARGL KKDIPVLVATDVAARGLDIPSIKTVINYDV K D I A R G 3 1 0 2 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 3 0 0 13 0 1338.7507 Q86XP3 Q86XP3 548 560 DDX42 ATP-dependent RNA helicase DDX42 yes yes 2 0.00028351 144.17 By MS/MS 4 0.816 1 1 1 3 826770 826770 0 2419 1842 2499 6116;6117;6118 4409 4409 1 23618 0 DIQEESTFSSR LLSPARLYAIAAKEKDIQEESTFSSRKISN AKEKDIQEESTFSSRKISNQFDWALMRLDL K D I S R K 0 1 0 1 0 1 2 0 0 1 0 0 0 1 0 3 1 0 0 0 0 0 11 0 1297.5786 P42704 P42704 67 77 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 3.6491E-07 189.17 By MS/MS By MS/MS 3.4 1.02 1 2 1 1 4 1 14024000 13876000 147310 2420 854 2500 6119;6120;6121;6122;6123 4410;4411;4412 4412 3 367770 211120 DIQENDEEAVQVK DREASIDILHSIVKRDIQENDEEAVQVKEQ KRDIQENDEEAVQVKEQSILELGSLLAKTG R D I V K E 1 0 1 2 0 2 3 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 13 0 1515.7053 O00231 O00231 34 46 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 1.2378E-25 246.56 By MS/MS By matching 7 0 2 1 1 1607200 1553600 53600 2421 80 2501 6124;6125 4413 4413 1 27763 220040 DIQGPGNPQCFSLR ______________________________ RDIQGPGNPQCFSLRTEQGTVLIGSEHGLI R D I L R T 0 1 1 1 1 2 0 2 0 1 1 0 0 1 2 1 0 0 0 0 0 0 14 0 1587.7464 O95163 O95163 14 27 IKBKAP Elongator complex protein 1 yes yes 2 0.0030192 112.44 By MS/MS 2 0.816 1 1 1 3 1423100 1423100 0 2422 368 2502 6126;6127;6128 4414;4415;4416 4415 3 45321 0 DIQQTLTQNMER EDVVTFQTLPPQRRRDIQQTLTQNMERIFS RRRDIQQTLTQNMERIFSFLLNTLQENVNK R D I E R I 0 1 1 1 0 3 1 0 0 1 1 0 1 0 0 0 2 0 0 0 0 0 12 0 1475.7038 Q9HAV4 Q9HAV4 177 188 XPO5 Exportin-5 yes yes 2 2.3701E-16 241.39 By MS/MS 3 0 1 1 700840 700840 0 2423 2546 2503 6129 4417 4417 1 18296 0 DIQTLLSR SEPRVRLVMAQHMIRDIQTLLSRMETLPYL MAQHMIRDIQTLLSRMETLPYLQCRGGPQP R D I S R M 0 1 0 1 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 8 0 944.5291 P46379 P46379 175 182 BAG6 Large proline-rich protein BAG6 yes yes 2 0.022124 104.01 By MS/MS 3 0 1 1 579970 579970 0 2424 880 2504 6130 4418 4418 1 15140 0 DIQTNVYIK RVAEFHTELERLPAKDIQTNVYIKHPVSLE ERLPAKDIQTNVYIKHPVSLEQYLMEGSYN K D I I K H 0 0 1 1 0 1 0 0 0 2 0 1 0 0 0 0 1 0 1 1 0 0 9 0 1092.5815 P48556 P48556 219 227 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 2 0.0010268 141.52 By MS/MS 8 0 1 1 2788200 2788200 0 2425 906 2505 6131 4419 4419 1 183940 0 DIREEAEKYAK WVGELTNGRHEIVPKDIREEAEKYAKESLK IVPKDIREEAEKYAKESLKEEDESDDDNM_ K D I A K E 2 1 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 11 2 1350.6779 P25788 P25788 231 241 PSMA3 Proteasome subunit alpha type-3 yes yes 3 0.0096315 110.93 By MS/MS 9 0.816 1 1 1 3 7225400 7225400 0 2426 690 2506 6132;6133;6134 4420 4420 1 760490 0 DISCLNR LFRDATRYMDGHHVKDISCLNRDPARVVVV YMDGHHVKDISCLNRDPARVVVVDCKKEAF K D I N R D 0 1 1 1 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 876.41235 Q3ZCQ8 Q3ZCQ8 233 239 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.019236 128.48 By MS/MS 7 0 1 1 3014000 3014000 0 2427 1573 2507 6135 4421 4421 1 53861 0 DISDIEGEKDGIR KLSPELLNTGRFETKDISDIEGEKDGIRKA TKDISDIEGEKDGIRKAREVLMRLGLDPTQ K D I I R K 0 1 0 3 0 0 2 2 0 3 0 1 0 0 0 1 0 0 0 0 0 0 13 1 1445.6998 P52789 P52789 338 350 HK2 Hexokinase-2 yes yes 2 0.00029309 162.26 By MS/MS 4 0 1 1 801650 801650 0 2428 992 2508 6136 4422 4422 1 21884 0 DISEAALKER HIPCLMPEYFEPQIKDISEAALKERIELRK EPQIKDISEAALKERIELRKVKASVDMFDQ K D I E R I 2 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 10 1 1130.5932 Q96EY7 Q96EY7 151 160 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.010334 119.22 By MS/MS By matching 5.75 0.829 2 1 1 3 1 8627900 8598200 29731 2429 2170 2509 6137;6138;6139;6140 4423 4423 1 299610 87973 DISEASVFDAYVLPK KKFVIRNIVEAAAVRDISEASVFDAYVLPK DISEASVFDAYVLPKLYVKLHYCVSCAIHS R D I P K L 2 0 0 2 0 0 1 0 0 1 1 1 0 1 1 2 0 0 1 2 0 0 15 0 1652.8298 P62854 P62854 52 66 RPS26 40S ribosomal protein S26 yes yes 2 9.2619E-10 180.97 By MS/MS 9.5 0.5 1 1 2 1562800 1562800 0 2430 1151 2510 6141;6142 4424;4425;4426;4427 4425 4 1534200 0 DISLSDYK PNFKATAVMPDGQFKDISLSDYKGKYVVFF MPDGQFKDISLSDYKGKYVVFFFYPLDFTF K D I Y K G 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 8 0 939.45493 Q06830 Q06830 28 35 PRDX1 Peroxiredoxin-1 yes yes 2 0.0068313 130.27 By MS/MS 9 0 1 1 1620300 1620300 0 2431 1277 2511 6143 4428 4428 1 929880 0 DISPVLKDPASFR IRSFPDFPTPGVVFRDISPVLKDPASFRAA FRDISPVLKDPASFRAAIGLLARHLKATHG R D I F R A 1 1 0 2 0 0 0 0 0 1 1 1 0 1 2 2 0 0 0 1 0 0 13 1 1443.7722 P07741 P07741 28 40 APRT Adenine phosphoribosyltransferase yes yes 2 0.015949 118.9 By MS/MS 8.5 0.5 1 1 2 436060 436060 0 2432 492 2512 6144;6145 4429 4429 1 210810 0 DISSSLNSLADSNAR NGNVEAKVVCLFRRRDISSSLNSLADSNAR DISSSLNSLADSNAREFEEESKQPGVSEQQ R D I A R E 2 1 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 0 15 0 1548.738 O94776 O94776 50 64 MTA2 Metastasis-associated protein MTA2 yes yes 2 1.2593E-49 272.59 By MS/MS 5 0 1 1 2138400 2138400 0 2433 349 2513 6146 4430 4430 1 87896 0 DISSTLIALADK NGNVEAKVVCFYRRRDISSTLIALADKHAT RRRDISSTLIALADKHATLSVCYKAGPGAD R D I D K H 2 0 0 2 0 0 0 0 0 2 2 1 0 0 0 2 1 0 0 0 0 0 12 0 1245.6816 Q13330 Q13330 50 61 MTA1 Metastasis-associated protein MTA1 yes yes 2 0.0003533 145.46 By MS/MS 4.5 0.5 1 1 2 518680 518680 0 2434 1357 2514 6147;6148 4431 4431 1 20930 0 DISTNYYASQK NMERIMKAQAYQTGKDISTNYYASQKKTFE QTGKDISTNYYASQKKTFEINPRHPLIRDM K D I Q K K 1 0 1 1 0 1 0 0 0 1 0 1 0 0 0 2 1 0 2 0 0 0 11 0 1288.5935 P14625 P14625 672 682 HSP90B1 Endoplasmin yes yes 2 6.1795E-07 184.71 By MS/MS 3 0.816 1 1 1 3 6649800 6649800 0 2435 589 2515 6149;6150;6151 4432 4432 1 183590 0 DISTNYYASQKK NMERIMKAQAYQTGKDISTNYYASQKKTFE TGKDISTNYYASQKKTFEINPRHPLIRDML K D I K K T 1 0 1 1 0 1 0 0 0 1 0 2 0 0 0 2 1 0 2 0 0 0 12 1 1416.6885 P14625 P14625 672 683 HSP90B1 Endoplasmin yes yes 2 0.013477 113.69 By MS/MS 4 0 1 1 804520 804520 0 2436 589 2516 6152 4433 4433 1 21963 0 DISTTLNADEAVAR RIPAVKERIAKFFGKDISTTLNADEAVARG KDISTTLNADEAVARGCALQCAILSPAFKV K D I A R G 3 1 1 2 0 0 1 0 0 1 1 0 0 0 0 1 2 0 0 1 0 0 14 0 1474.7264 O95757;Q92598 Q92598 361 374 HSPA4L;HSPH1 Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa no no 2 3.6299E-46 273.44 By MS/MS 4.5 0.5 1 1 2 2106800 2106800 0 2437 2063;405 2517 6153;6154 4434 4434 1 61010 0 DITEEIMSGAR ERKTIRIRDPNQGGKDITEEIMSGARTAST QGGKDITEEIMSGARTASTPTPPQTGGGLE K D I A R T 1 1 0 1 0 0 2 1 0 2 0 0 1 0 0 1 1 0 0 0 0 0 11 0 1220.5707 Q04637 Q04637 191 201 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 9.7474E-11 202.2 By MS/MS 2 0.632 1 3 1 5 4030900 4030900 0 2438 1264 2518;2519 6155;6156;6157;6158;6159 4435;4436;4437;4438 4435 1022 4 189120 0 DITHGNR YFVRRSRMHNIPVYKDITHGNRQMTVIRKV MHNIPVYKDITHGNRQMTVIRKVEGDIWAL K D I N R Q 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 7 0 811.39366 Q13405 Q13405 99 105 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 0.024601 118.69 By MS/MS By matching 10 0 2 1 1 424930 412130 12805 2439 1364 2520 6160;6161 4439 4439 1 438050 328430 DIVEAHYR GPYYCGVGADRAYGRDIVEAHYRACLYAGV ADRAYGRDIVEAHYRACLYAGVKIAGTNAE R D I Y R A 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 8 0 1001.493 P15104 P15104 174 181 GLUL Glutamine synthetase yes yes 2 0.015535 114.78 By MS/MS 7 0 1 1 0 0 0 2440 596 2521 6162 4440 4440 1 0 0 DIVENYFMR TVVDCPVCKQQCFSKDIVENYFMRDSGSKA QQCFSKDIVENYFMRDSGSKAATDAQDANQ K D I M R D 0 1 1 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 1 0 0 9 0 1185.5488 Q13263 Q13263 128 136 TRIM28 Transcription intermediary factor 1-beta yes yes 2 3.1851E-06 178.94 By MS/MS By MS/MS 4.25 0.433 3 1 3 1 1849700 1795900 53787 2441 1351 2522;2523 6163;6164;6165;6166 4441;4442;4443 4442 1057 2 50279 112390 DIVPGDIVEIAVGDK VYRQDRKSVQRIKAKDIVPGDIVEIAVGDK DIVPGDIVEIAVGDKVPADIRLTSIKSTTL K D I D K V 1 0 0 3 0 0 1 2 0 3 0 1 0 0 1 0 0 0 0 3 0 0 15 0 1538.8192 P16615 P16615 144 158 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.0044943 106.26 By MS/MS 3 1.41 1 1 1 1 1 5 1092900 1092900 0 2442 608 2524 6167;6168;6169;6170;6171 4444;4445;4446 4445 3 36578 0 DIVQFVPFR DGGSLRSPLGEVAIRDIVQFVPFRQFQNAP GEVAIRDIVQFVPFRQFQNAPKEALAQCVL R D I F R Q 0 1 0 1 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 9 0 1119.6077 O75131;Q96FN4;Q8IYJ1;Q96A23;O95741;Q86YQ8;Q9HCH3;Q9UBL6 O75131 485 493 CPNE3;CPNE2;CPNE9;CPNE4;CPNE6;CPNE8;CPNE5;CPNE7 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-8;Copine-5;Copine-7 yes no 2 0.00083166 153.08 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 7907500 7907500 0 2443 282 2525 6172;6173;6174;6175;6176;6177 4447 4447 1 143550 0 DIWLSLGVPASR DGDPKAGLDPDLETRDIWLSLGVPASRVLS ETRDIWLSLGVPASRVLSFGPQENFWEMGD R D I S R V 1 1 0 1 0 0 0 1 0 1 2 0 0 0 1 2 0 1 0 1 0 0 12 0 1312.7139 Q5JTZ9 Q5JTZ9 188 199 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.0012089 130.94 By MS/MS 4 0 1 1 342930 342930 0 2444 1611 2526 6178 4448 4448 1 9361.7 0 DIYELIK KDATNVEESFTILTRDIYELIKKGEICIQD ESFTILTRDIYELIKKGEICIQDGWEGVKS R D I I K K 0 0 0 1 0 0 1 0 0 2 1 1 0 0 0 0 0 0 1 0 0 0 7 0 892.49058 Q14964 Q14964 174 180 RAB39A Ras-related protein Rab-39A yes yes 2 0.039719 108.24 By MS/MS 9 0 1 1 676610 676610 0 2445 1451 2527 6179 4449 4449 1 388310 0 DIYQDLNR GILITERKKADFSTKDIYQDLNRLLKGKKG KADFSTKDIYQDLNRLLKGKKGEQMNSAVL K D I N R L 0 1 1 2 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1035.4985 P43246 P43246 236 243 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.013332 116.25 By MS/MS 4 0 2 2 0 0 0 2446 862 2528 6180;6181 4450;4451 4451 2 0 0 DKALQDYR ______________________________ ______________________________ R D K Y R K 1 1 0 2 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 1 1007.5036 P62333 P62333 6 13 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.036877 137.14 By MS/MS 8.5 1.12 1 1 1 1 4 5306000 5306000 0 2447 1133 2529 6182;6183;6184;6185 4452 4452 1 305770 0 DKALQDYRK ______________________________ ______________________________ R D K R K K 1 1 0 2 0 1 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 9 2 1135.5986 P62333 P62333 6 14 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.0032176 112.71 By MS/MS 7 0 1 1 1226900 1226900 0 2448 1133 2530 6186 4453 4453 1 21926 0 DKANMQHR VEFATHEDAVAAMSKDKANMQHRYVELFLN AVAAMSKDKANMQHRYVELFLNSTAGASGG K D K H R Y 1 1 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 8 1 998.4716 P31943;P55795 P31943 348 355 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 3 0.0054097 110.41 By MS/MS 6 0 1 1 0 0 0 2449 758;1037 2531 6187 4454 4454 1 0 0 DKATTSGSNSISVR KKAQQETGEREASCRDKATTSGSNSISVRA RDKATTSGSNSISVRAFLDEDDMSLEEIKN R D K V R A 1 1 1 1 0 0 0 1 0 1 0 1 0 0 0 4 2 0 0 1 0 0 14 1 1421.711 Q86XL3 Q86XL3 625 638 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.0079233 64.04 By MS/MS 4 0 1 1 514820 514820 0 2450 1841 2532 6188 4455 4455 1 14054 0 DKDAYSSFGSR KGFYDKDSSGWSSSKDKDAYSSFGSRSDSR SSSKDKDAYSSFGSRSDSRGKSSFFSDRGS K D K S R S 1 1 0 2 0 0 0 1 0 0 0 1 0 1 0 3 0 0 1 0 0 0 11 1 1231.5469 O00571;O15523 O00571 65 75 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.0017332 153.54 By MS/MS 5 0 1 1 6147800 6147800 0 2451 105 2533 6189 4456 4456 1 252700 0 DKDDDEVFEK FRKLLLNRCQKEFEKDKDDDEVFEKKQKEM KEFEKDKDDDEVFEKKQKEMDEAATAEERG K D K E K K 0 0 0 4 0 0 2 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 10 1 1238.5303 Q04637 Q04637 854 863 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 7.2026E-15 222.3 By MS/MS 2 0 1 1 2721700 2721700 0 2452 1264 2534 6190 4457 4457 1 135280 0 DKDDDEVFEKK FRKLLLNRCQKEFEKDKDDDEVFEKKQKEM EFEKDKDDDEVFEKKQKEMDEAATAEERGR K D K K K Q 0 0 0 4 0 0 2 0 0 0 0 3 0 1 0 0 0 0 0 1 0 0 11 2 1366.6252 Q04637 Q04637 854 864 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.00075242 120.55 By MS/MS 2 0 1 1 1575900 1575900 0 2453 1264 2535 6191 4458 4458 1 78331 0 DKELEGLQVK SNKALLEMAEEKTVRDKELEGLQVKIQRLE EKTVRDKELEGLQVKIQRLEKLCRALQTER R D K V K I 0 0 0 1 0 1 2 1 0 0 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1157.6292 P40222 P40222 454 463 TXLNA Alpha-taxilin yes yes 2 2.4158E-06 191.45 By MS/MS 5 0 1 1 2732700 2732700 0 2454 827 2536 6192 4459 4459 1 112320 0 DKETGGILR IKALNHEIEELEKRKDKETGGILRSLEDAL ELEKRKDKETGGILRSLEDALAEAQRVNTK K D K L R S 0 1 0 1 0 0 1 2 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 1 987.53491 O95347 O95347 289 297 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.043915 113.66 By MS/MS 3 0 1 1 974860 974860 0 2455 385 2537 6193 4460 4460 1 25449 0 DKFNECGHVLYADIK FVRNLPFDFTWKMLKDKFNECGHVLYADIK DKFNECGHVLYADIKMENGKSKGCGVVKFE K D K I K M 1 0 1 2 1 0 1 1 1 1 1 2 0 1 0 0 0 0 1 1 0 0 15 1 1807.8563 P52272 P52272 671 685 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 3 0.043961 58.658 By MS/MS 5 0 1 1 3112300 3112300 0 2456 982 2538 6194 4461 4461 1 127930 0 DKFPEVIINFPDPAQK RTIIGQKGERIREIRDKFPEVIINFPDPAQ KFPEVIINFPDPAQKSDIVQLRGPKNEVEK R D K Q K S 1 0 1 2 0 1 1 0 0 2 0 2 0 2 3 0 0 0 0 1 0 0 16 1 1856.9672 Q00341 Q00341 535 550 HDLBP Vigilin yes yes 3 0.032208 68.329 By MS/MS 3.5 0.5 1 1 2 260470 260470 0 2457 1231 2539 6195;6196 4462 4462 1 6902.8 0 DKFQETSDEFEAAR AAPNMKAMEKLESVRDKFQETSDEFEAARK RDKFQETSDEFEAARKRAKKAKQAFEQIKK R D K A R K 2 1 0 2 0 1 3 0 0 0 0 1 0 2 0 1 1 0 0 0 0 0 14 1 1671.7376 Q14683 Q14683 1036 1049 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 4.9312E-11 213.99 By MS/MS 3 0 2 2 2002800 2002800 0 2458 1440 2540 6197;6198 4463;4464 4464 2 52284 0 DKFSFDLGKGEVIK WLLDGTKFDSSLDRKDKFSFDLGKGEVIKA KDKFSFDLGKGEVIKAWDIAIATMKVGEVC K D K I K A 0 0 0 2 0 0 1 2 0 1 1 3 0 2 0 1 0 0 0 1 0 0 14 2 1581.8403 Q02790 Q02790 75 88 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 3 0.00036656 132.24 By MS/MS 6 0 1 1 6386900 6386900 0 2459 1255 2541 6199 4465 4465 1 49805 0 DKGEYTLVVK KHVGSRLYSVSYLLKDKGEYTLVVKWGDEH SYLLKDKGEYTLVVKWGDEHIPGSPYRVVV K D K V K W 0 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 1 2 0 0 10 1 1150.6234 P21333 P21333 2622 2631 FLNA Filamin-A yes yes 2 0.0056427 133.81 By MS/MS 2.5 0.5 1 1 2 1331100 1331100 0 2460 648 2542 6200;6201 4466 4466 1 53806 0 DKHPPELQVAFADCAADIK FRSDLREEILMLMARDKHPPELQVAFADCA PELQVAFADCAADIKSAYESQPIRQTAQDW R D K I K S 4 0 0 3 1 1 1 0 1 1 1 2 0 1 2 0 0 0 0 1 0 0 19 1 2124.031 Q96EY7 Q96EY7 538 556 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 3 0.0081024 70.907 By MS/MS 5 0 1 1 1095800 1095800 0 2461 2170 2543 6202 4467 4467 1 45043 0 DKITRPGAK MDITHLDGHKVHISRDKITRPGAKLWKKGE KVHISRDKITRPGAKLWKKGEGLPNFDNNN R D K A K L 1 1 0 1 0 0 0 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 984.57163 Q9UBS4 Q9UBS4 290 298 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2;3 0.044356 119.21 By MS/MS 7 0 2 2 7209500 7209500 0 2462 2756 2544 6203;6204 4468;4469 4468 2 128840 0 DKLDETGNSLK LPVKGFRSYVDMYLKDKLDETGNSLKVIHE MYLKDKLDETGNSLKVIHEQVNHRWEVCLT K D K L K V 0 0 1 2 0 0 1 1 0 0 2 2 0 0 0 1 1 0 0 0 0 0 11 1 1218.6092 P11388 P11388 277 287 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.018713 119.22 By MS/MS 3 0 1 1 221030 221030 0 2463 553 2545 6205 4470 4470 0 5769.9 0 DKLDQVSSEIK LAKHGMKVVLISRSKDKLDQVSSEIKEKFK SRSKDKLDQVSSEIKEKFKVETRTIAVDFA K D K I K E 0 0 0 2 0 1 1 0 0 1 1 2 0 0 0 2 0 0 0 1 0 0 11 1 1260.6561 Q53GQ0 Q53GQ0 85 95 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.010305 152.04 By MS/MS 8 0 1 1 1574200 1574200 0 2464 1584 2546 6206 4471 4471 1 103850 0 DKLDQVSSEIKEK LAKHGMKVVLISRSKDKLDQVSSEIKEKFK SKDKLDQVSSEIKEKFKVETRTIAVDFASE K D K E K F 0 0 0 2 0 1 2 0 0 1 1 3 0 0 0 2 0 0 0 1 0 0 13 2 1517.7937 Q53GQ0 Q53GQ0 85 97 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 1.2948E-10 196.02 By MS/MS 8 0 2 2 31165000 31165000 0 2465 1584 2547 6207;6208 4472;4473 4473 2 2055900 0 DKLNNLVLFDK GGKAKKKKWSKGKVRDKLNNLVLFDKATYD GKVRDKLNNLVLFDKATYDKLCKEVPNYKL R D K D K A 0 0 2 2 0 0 0 0 0 0 3 2 0 1 0 0 0 0 0 1 0 0 11 1 1317.7293 P62851 P62851 42 52 RPS25 40S ribosomal protein S25 yes yes 2;3 6.5652E-06 197.73 By MS/MS 9.5 0.5 2 2 4 6724300 6724300 0 2466 1150 2548 6209;6210;6211;6212 4474;4475;4476 4475 3 6347100 0 DKLTELQLR QVGEHANNYPEIAAKDKLTELQLRARQLLD PEIAAKDKLTELQLRARQLLDQVEQIQKEQ K D K L R A 0 1 0 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 9 1 1114.6346 Q7Z7H5 Q7Z7H5 151 159 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 2 0.0091035 138.08 By MS/MS 9 0 1 1 681110 681110 0 2467 1808 2549 6213 4477 4477 1 390890 0 DKMLVIEQCK GFAGLVQEISFGTTKDKMLVIEQCKNSRAV FGTTKDKMLVIEQCKNSRAVTIFIRGGNKM K D K C K N 0 0 0 1 1 1 1 0 0 1 1 2 1 0 0 0 0 0 0 1 0 0 10 1 1262.6363 P48643 P48643 369 378 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0055219 134.57 By MS/MS 6 0 1 1 5897600 5897600 0 2468 909 2550 6214 4478 4478 1 45990 0 DKNEATVSTGK ALSGVLEQDRVQSLKDKNEATVSTGKIAKG QSLKDKNEATVSTGKIAKGKPVDSQTSRSE K D K G K I 1 0 1 1 0 0 1 1 0 0 0 2 0 0 0 1 2 0 0 1 0 0 11 1 1148.5673 Q9Y450 Q9Y450 130 140 HBS1L HBS1-like protein yes yes 2 4.1708E-10 208.15 By MS/MS 1.5 0.5 1 1 2 380450 380450 0 2469 2945 2551 6215;6216 4479 4479 1 18678 0 DKNELVQK ______________________________ ______________________________ M D K Q K A 0 0 1 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 1 972.52401 P63104 P63104 2 9 YWHAZ 14-3-3 protein zeta/delta yes yes 3 0.05257 47.082 By MS/MS 10 0 1 1 11023 11023 0 2470 1169 2552 6217 4480 4480 0 11716 0 DKNEQAFEEVFQNANFR EAILGQNAAYLGELKDKNEQAFEEVFQNAN NEQAFEEVFQNANFRSFIFRVRVKVETYND K D K F R S 2 1 3 1 0 2 3 0 0 0 0 1 0 3 0 0 0 0 0 1 0 0 17 1 2084.9552 P27694 P27694 552 568 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 3 0.0050953 88.951 By MS/MS 5 0 1 1 304560 304560 0 2471 708 2553 6218 4481 4481 1 12519 0 DKPELQFPFLQDEDTVATLLECK LPKIFFRKMSSSGAKDKPELQFPFLQDEDT FLQDEDTVATLLECKTLFILRGLPGSGKST K D K C K T 1 0 0 3 1 2 3 0 0 0 4 2 0 2 2 0 2 0 0 1 0 0 23 1 2735.3364 P09543 P09543 28 50 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.0022624 71.656 By MS/MS 6 0 1 1 175860 175860 0 2472 516 2554 6219 4482 4482 1 1371.3 0 DKPHNIFK QTSNNIPADIVFVLKDKPHNIFKRDGSDVI DIVFVLKDKPHNIFKRDGSDVIYPARISLR K D K F K R 0 0 1 1 0 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 0 0 8 1 997.53451 P25685 P25685 241 248 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 3 0.0087941 107.69 By MS/MS 7.5 0.5 1 1 2 1427200 1427200 0 2473 686 2555 6220;6221 4483 4483 1 32150 0 DKPHVNVGTIGHVDHGK LCRGLAVEAKKTYVRDKPHVNVGTIGHVDH PHVNVGTIGHVDHGKTTLTAAITKILAEGG R D K G K T 0 0 1 2 0 0 0 3 3 1 0 2 0 0 1 0 1 0 0 3 0 0 17 1 1808.9282 P49411 P49411 54 70 TUFM Elongation factor Tu, mitochondrial yes yes 3;4;5 0.0070719 89.913 By MS/MS 6.75 0.433 1 3 4 22834000 22834000 0 2474 918 2556 6222;6223;6224;6225 4484;4485;4486 4486 3 385160 0 DKPLKDVIIADCGK MEVVRKVESTKTDSRDKPLKDVIIADCGKI RDKPLKDVIIADCGKIEVEKPFAIAKE___ R D K G K I 1 0 0 3 1 0 0 1 0 2 1 3 0 0 1 0 0 0 0 1 0 0 14 2 1570.8389 P23284 P23284 191 204 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 3 0.0085706 88.561 By MS/MS 9 0 1 1 1177500 1177500 0 2475 667 2557 6226 4487 4487 1 675790 0 DKPNPQLIYDDEIPSLK IPKYGLEGTVFFEEKDKPNPQLIYDDEIPS PNPQLIYDDEIPSLKIEDTVFHVFDKVKVK K D K L K I 0 0 1 3 0 1 1 0 0 2 2 2 0 0 3 1 0 0 1 0 0 0 17 1 1984.0153 Q9Y2L1 Q9Y2L1 879 895 DIS3 Exosome complex exonuclease RRP44 yes yes 3 4.3248E-07 147.49 By MS/MS 4 0 1 1 1032100 1032100 0 2476 2892 2558 6227 4488 4488 1 28174 0 DKQDADRPLSK TELQEKETPTQVYQKDKQDADRPLSKMNRA VYQKDKQDADRPLSKMNRAVNGETLKTGGD K D K S K M 1 1 0 3 0 1 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 11 2 1271.647 Q5SW79 Q5SW79 690 700 CEP170 Centrosomal protein of 170 kDa yes yes 3 0.00027545 146.71 By MS/MS 2.5 0.5 1 1 2 393390 393390 0 2477 1621 2559 6228;6229 4489 4489 1 16736 0 DKQTESLVEK PFHTIMKQLLSYITKDKQTESLVEKLCQRF SYITKDKQTESLVEKLCQRFRTSRTERQQR K D K E K L 0 0 0 1 0 1 2 0 0 0 1 2 0 0 0 1 1 0 0 1 0 0 10 1 1175.6034 Q15021 Q15021 1200 1209 NCAPD2 Condensin complex subunit 1 yes yes 2 0.0019869 154.01 By MS/MS 3 0 1 1 496770 496770 0 2478 1464 2560 6230 4490 4490 1 12968 0 DKSEEVQK LNEQKNLHSEISGKRDKSEEVQKIAELCAN SEISGKRDKSEEVQKIAELCANSIKDYELQ R D K Q K I 0 0 0 1 0 1 2 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 8 1 961.47164 P15924 P15924 942 949 DSP Desmoplakin yes yes 2 0.013241 160.11 By MS/MS By matching 2 0 2 1 1 190430 170790 19640 2479 603 2561 6231;6232 4491 4491 1 8489.2 16535 DKVIPLYGR PNRQVCPVCKAGISRDKVIPLYGRGSTGQQ KAGISRDKVIPLYGRGSTGQQDPREKTPPR R D K G R G 0 1 0 1 0 0 0 1 0 1 1 1 0 0 1 0 0 0 1 1 0 0 9 1 1059.6077 Q96GF1 Q96GF1 86 94 RNF185 E3 ubiquitin-protein ligase RNF185 yes yes 2 0.012754 132.76 By MS/MS 9 0 1 1 1159600 1159600 0 2480 2182 2562 6233 4492 4492 1 665490 0 DKVQAGDVITIDK TIYDLGTKMIESLTKDKVQAGDVITIDKAT TKDKVQAGDVITIDKATGKISKLGRSFTRA K D K D K A 1 0 0 3 0 1 0 1 0 2 0 2 0 0 0 0 1 0 0 2 0 0 13 1 1400.7511 Q9Y230 Q9Y230 185 197 RUVBL2 RuvB-like 2 yes yes 2 7.5952E-17 223.22 By MS/MS 6 0 1 1 14829000 14829000 0 2481 2864 2563 6234 4493 4493 1 115640 0 DKVQAGDVITIDKATGK TIYDLGTKMIESLTKDKVQAGDVITIDKAT VQAGDVITIDKATGKISKLGRSFTRARDYD K D K G K I 2 0 0 3 0 1 0 2 0 2 0 3 0 0 0 0 2 0 0 2 0 0 17 2 1757.9523 Q9Y230 Q9Y230 185 201 RUVBL2 RuvB-like 2 yes yes 3 0.0015721 114.28 By MS/MS 6.5 0.5 1 1 2 11291000 11291000 0 2482 2864 2564 6235;6236 4494 4494 1 89733 0 DKVYEQLAK SDVLQRDLRKVLDHRDKVYEQLAKYLQLRN KVLDHRDKVYEQLAKYLQLRNVIERLQEAK R D K A K Y 1 0 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 1 1 0 0 9 1 1092.5815 Q9UBK9 Q9UBK9 40 48 UXT Protein UXT yes yes 2 0.0097545 137.13 By MS/MS 10 0 1 1 172570 172570 0 2483 2752 2565 6237 4495 4495 1 183430 0 DKWSNFDPTGLER EGGGDRGLGDRPAPKDKWSNFDPTGLERAA PKDKWSNFDPTGLERAAKAARELEHSRYAK K D K E R A 0 1 1 2 0 0 1 1 0 0 1 1 0 1 1 1 1 1 0 0 0 0 13 1 1563.7318 Q5T9A4;Q9NVI7 Q9NVI7 45 57 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.016745 76.728 By MS/MS 5.5 0.5 1 1 2 5417600 5417600 0 2484 2655;1634 2566 6238;6239 4496 4496 1 120050 0 DKYEPAAVSEQGDKK ______________________________ DKYEPAAVSEQGDKKGKKGKKDRDMDELKK R D K K K G 2 0 0 2 0 1 2 1 0 0 0 3 0 0 1 1 0 0 1 1 0 0 15 2 1663.8053 P05023 P05023 8 22 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 4.7007E-06 151.49 By MS/MS 2.67 1.25 1 1 1 3 2648900 2648900 0 2485 463 2567 6240;6241;6242 4497;4498;4499 4497 3 87486 0 DKYPNLQVIGGNVVTAAQAK QGNSIFQINMIKYIKDKYPNLQVIGGNVVT LQVIGGNVVTAAQAKNLIDAGVDALRVGMG K D K A K N 3 0 2 1 0 2 0 2 0 1 1 2 0 0 1 0 1 0 1 3 0 0 20 1 2085.1219 P12268 P12268 292 311 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.00056537 99.569 By MS/MS 6 0 1 1 6562000 6562000 0 2486 564 2568 6243 4500 4500 1 51170 0 DLADALLDTER LPSCPPVETALINQRDLADALLDTERSLRE INQRDLADALLDTERSLRELAQPSGGHLPQ R D L E R S 2 1 0 3 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 11 0 1230.6092 Q2TAZ0 Q2TAZ0 1282 1292 ATG2A Autophagy-related protein 2 homolog A yes yes 2 0.0022622 119.22 By MS/MS 2 0.816 1 1 1 3 202090 202090 0 2487 1563 2569 6244;6245;6246 4501;4502 4502 2 7316.8 0 DLADELALVDVIEDK VGAVGMACAISILMKDLADELALVDVIEDK DLADELALVDVIEDKLKGEMMDLQHGSLFL K D L D K L 2 0 0 4 0 0 2 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1656.8458 P00338 P00338 43 57 LDHA L-lactate dehydrogenase A chain yes yes 2 0.0032852 110.64 By MS/MS 8 0 1 1 182070 182070 0 2488 424 2570 6247 4503;4504;4505 4503 3 12011 0 DLADVAAR VTARPTAVNMARAARDLADVAAREAEREGA NMARAARDLADVAAREAEREGATEEAVRER R D L A R E 3 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 829.42938 Q9BV20 Q9BV20 102 109 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 0.0069891 129.68 By MS/MS 6.5 1.12 1 1 1 1 4 8276400 8276400 0 2489 2369 2571 6248;6249;6250;6251 4506 4506 1 229460 0 DLAEIGIAVGNNDVK HQKKRAAEMMASLLKDLAEIGIAVGNNDVK DLAEIGIAVGNNDVKQPEGTGMIDEEFTVA K D L V K Q 2 0 2 2 0 0 1 2 0 2 1 1 0 0 0 0 0 0 0 2 0 0 15 0 1526.794 P33176 P33176 561 575 KIF5B Kinesin-1 heavy chain yes yes 2 0.0033203 110.51 By MS/MS 4 0 1 1 615610 615610 0 2490 767 2572 6252 4507 4507 1 16805 0 DLAFVDPEDCTPLSTITR YEEERSNIVDMLYLKDLAFVDPEDCTPLST FVDPEDCTPLSTITRFYNHPLHFVFNDTKL K D L T R F 1 1 0 3 1 0 1 0 0 1 2 0 0 1 2 1 3 0 0 1 0 0 18 0 2048.9725 Q8NE01 Q8NE01 367 384 CNNM3 Metal transporter CNNM3 yes yes 2 5.8691E-05 135.58 By MS/MS 4.5 0.5 1 1 2 421770 421770 0 2491 1960 2573 6253;6254 4508 4508 1 15896 0 DLAGRLPAGPR ______________________________ QNLKDLAGRLPAGPRGMGTALKLLLGAGAV K D L P R G 2 2 0 1 0 0 0 2 0 0 2 0 0 0 2 0 0 0 0 0 0 0 11 1 1121.6305 Q99623 Q99623 7 17 PHB2 Prohibitin-2 yes yes 2;3 0.014867 83.647 By MS/MS By matching 8.25 0.433 3 1 3 1 8993700 8941300 52375 2492 2277 2574 6255;6256;6257;6258 4509;4510 4510 2 626870 446830 DLALAAEALR LQGCLDALGHYKQSKDLALAAEALRVARGH YKQSKDLALAAEALRVARGHLTRLTGGGGT K D L L R V 4 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1041.5819 Q969Y2 Q969Y2 453 462 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 0.0009379 140.75 By MS/MS 7.2 0.748 1 2 2 5 6450200 6450200 0 2493 2111 2575 6259;6260;6261;6262;6263 4511;4512 4511 2 99034 0 DLANIAEVEVSIPAK ANCEAARSRILSIQKDLANIAEVEVSIPAK DLANIAEVEVSIPAKLHNSLIGTKGRLIRS K D L A K L 3 0 1 1 0 0 2 0 0 2 1 1 0 0 1 1 0 0 0 2 0 0 15 0 1567.8457 Q00341 Q00341 649 663 HDLBP Vigilin yes yes 2 3.3287E-10 190.34 By MS/MS 3.5 0.5 1 1 2 377170 377170 0 2494 1231 2576 6264;6265 4513 4513 1 9956.5 0 DLAPYLPSVTPGLK AAQIIGNMYSLTDQKDLAPYLPSVTPGLKA KDLAPYLPSVTPGLKASLLDPVPEVRTVSA K D L L K A 1 0 0 1 0 0 0 1 0 0 3 1 0 0 3 1 1 0 1 1 0 0 14 0 1469.813 Q92616 Q92616 1650 1663 GCN1L1 Translational activator GCN1 yes yes 2 0.00098878 123.67 By MS/MS 3 0.816 1 1 1 3 2473200 2473200 0 2495 2068 2577 6266;6267;6268 4514;4515;4516 4515 3 93565 0 DLATVAFCDAQSTQEIHEK LLDGRDCTVEMPILKDLATVAFCDAQSTQE VAFCDAQSTQEIHEKVLNEAVGAMMYHTIT K D L E K V 3 0 0 2 1 2 2 0 1 1 1 1 0 1 0 1 2 0 0 1 0 0 19 0 2161.995 P56545 P56545 53 71 CTBP2 C-terminal-binding protein 2 yes yes 3 0.0030728 82.259 By MS/MS 6.5 0.5 1 1 2 6498600 6498600 0 2496 1047 2578 6269;6270 4517;4518 4517 2 84391 0 DLAYCVSQLPLTER LCQRFRTSRTERQQRDLAYCVSQLPLTERG RDLAYCVSQLPLTERGLRKMLDNFDCFGDK R D L E R G 1 1 0 1 1 1 1 0 0 0 3 0 0 0 1 1 1 0 1 1 0 0 14 0 1663.824 Q15021 Q15021 1225 1238 NCAPD2 Condensin complex subunit 1 yes yes 2 3.9043E-59 295.26 By MS/MS 3.5 0.5 1 1 2 2247500 2247500 0 2497 1464 2579 6271;6272 4519;4520 4519 2 59076 0 DLCGIVASK ALKLESCGVTSDNCRDLCGIVASKASLREL TSDNCRDLCGIVASKASLRELALGSNKLGD R D L S K A 1 0 0 1 1 0 0 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 0 961.49027 P13489 P13489 218 226 RNH1 Ribonuclease inhibitor yes yes 2 0.0023314 126.24 By MS/MS 7 0 1 1 3217100 3217100 0 2498 574 2580 6273 4521 4521 1 57491 0 DLCNTHLMR TLLNTSPEGWKLLKKDLCNTHLMRVLVQTL WKLLKKDLCNTHLMRVLVQTLCEPASIGFN K D L M R V 0 1 1 1 1 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1158.5274 P78527 P78527 1362 1370 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0034229 115.71 By MS/MS 1.5 0.5 1 1 2 422750 422750 0 2499 1197 2581 6274;6275 4522 4522 953 1 20799 0 DLDAPDDVDFF NRMVRGDPRAIVEYRDLDAPDDVDFF____ VEYRDLDAPDDVDFF_______________ R D L F F - 1 0 0 5 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 11 0 1267.5245 Q9BXP5 Q9BXP5 866 876 SRRT Serrate RNA effector molecule homolog yes yes 2 0.027325 82.75 By MS/MS 4 0 1 1 228960 228960 0 2500 2402 2582 6276 4523 4523 1 6250.4 0 DLDQASLAAVSQQLAPR LECETAIAALNSCLRDLDQASLAAVSQQLA DQASLAAVSQQLAPREGISQEALHTQMLTA R D L P R E 4 1 0 2 0 3 0 0 0 0 3 0 0 0 1 2 0 0 0 1 0 0 17 0 1781.9272 Q9Y490 Q9Y490 1674 1690 TLN1 Talin-1 yes yes 2;3 0.017712 111.72 By MS/MS 2.75 0.829 2 1 1 4 1118300 1118300 0 2501 2947 2583 6277;6278;6279;6280 4524;4525 4524 2 47129 0 DLDQLFLSSDCR NLTAFPGGAKELLLRDLDQLFLSSDCRHFN LLRDLDQLFLSSDCRHFNRTESLRLADELS R D L C R H 0 1 0 3 1 1 0 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 12 0 1467.6664 Q99941 Q99941 491 502 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 0.00090685 134.38 By MS/MS 4 0.816 1 1 1 3 532490 532490 0 2502 2297 2584 6281;6282;6283 4526 4526 1 15068 0 DLDRIAGQVAAANK KDQDGGRKLTPQGQRDLDRIAGQVAAANKK RDLDRIAGQVAAANKKH_____________ R D L N K K 4 1 1 2 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 14 1 1440.7685 P39019 P39019 130 143 RPS19 40S ribosomal protein S19 yes yes 2;3 0.0079855 113.65 By MS/MS By matching 10 0 4 2 2 3115200 3010700 104450 2503 823 2585 6284;6285;6286;6287 4527;4528 4528 2 3200100 2679000 DLDRIAGQVAAANKK KDQDGGRKLTPQGQRDLDRIAGQVAAANKK DLDRIAGQVAAANKKH______________ R D L K K H 4 1 1 2 0 1 0 1 0 1 1 2 0 0 0 0 0 0 0 1 0 0 15 2 1568.8635 P39019 P39019 130 144 RPS19 40S ribosomal protein S19 yes yes 3 0.010566 83.869 By MS/MS 10 0 1 1 591380 591380 0 2504 823 2586 6288 4529;4530 4529 2 628570 0 DLDVVVVSVAGAFR DEKALASILLQDHIRDLDVVVVSVAGAFRK RDLDVVVVSVAGAFRKGKSFILDFMLRYLY R D L F R K 2 1 0 2 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 5 0 0 14 0 1445.7878 Q6DD88 Q6DD88 57 70 ATL3 Atlastin-3 yes yes 2 0.029017 101.3 By MS/MS 6 0 1 1 118310 118310 0 2505 1677 2587 6289 4531 4531 0 922.62 0 DLDYLTIR EIKGVQQDEALQLPKDLDYLTIRDVSLSHE EALQLPKDLDYLTIRDVSLSHEVREKLHFS K D L I R D 0 1 0 2 0 0 0 0 0 1 2 0 0 0 0 0 1 0 1 0 0 0 8 0 1007.5288 Q9Y2Z2 Q9Y2Z2 638 645 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.014856 113.41 By MS/MS 5 0 1 1 679550 679550 0 2506 2908 2588 6290 4532 4532 1 27932 0 DLDYYGTLLK SAVKVLMKFMEMLSKDLDYYGTLLKKLAPP EMLSKDLDYYGTLLKKLAPPLVTLLSAEPE K D L L K K 0 0 0 2 0 0 0 1 0 0 3 1 0 0 0 0 1 0 2 0 0 0 10 0 1199.6074 Q10567 Q10567 273 282 AP1B1 AP-1 complex subunit beta-1 yes yes 2 0.00085933 129.38 By MS/MS 4 0 1 1 313160 313160 0 2507 1300 2589 6291 4533 4533 1 8549.1 0 DLEAEHVEVEDTTLNR ______________________________ LEAEHVEVEDTTLNRCSCSFRVLVVSAKFE R D L N R C 1 1 1 2 0 0 4 0 1 0 2 0 0 0 0 0 2 0 0 2 0 0 16 0 1868.8752 Q9H3K6 Q9H3K6 15 30 BOLA2 BolA-like protein 2 yes yes 2 1.2606E-07 175.48 By MS/MS 10 0 1 1 478990 478990 0 2508 2487 2590 6292 4534 4534 1 509110 0 DLEAPEVQESYR AAGARPLTSPESLSRDLEAPEVQESYRQQL LSRDLEAPEVQESYRQQLRSDIQKRLQEDP R D L Y R Q 1 1 0 1 0 1 3 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 12 0 1434.6627 P46379 P46379 1088 1099 BAG6 Large proline-rich protein BAG6 yes yes 2 0.0020794 121.02 By MS/MS 3 0 1 1 1017300 1017300 0 2509 880 2591 6293 4535 4535 1 26558 0 DLEASIAR KDNQQKANEVEQMIRDLEASIARYKEEYAV EVEQMIRDLEASIARYKEEYAVLISEAQAI R D L A R Y 2 1 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 873.4556 Q14204 Q14204 3439 3446 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0072772 128.61 By MS/MS 1 0 1 1 732330 732330 0 2510 1421 2592 6294 4536 4536 1 35780 0 DLECALLLR QDLLREDLNKKQTQKDLECALLLRQHEATR KKQTQKDLECALLLRQHEATRELELRQLQA K D L L R Q 1 1 0 1 1 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1101.5852 Q9UL54 Q9UL54 674 682 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 2 0.00048404 153.71 By MS/MS 3 0 1 1 391420 391420 0 2511 2821 2593 6295 4537 4537 1 10218 0 DLEDESTPIVK EQPTSQRDRLSQVLRDLEDESTPIVKLGDA QVLRDLEDESTPIVKLGDASIAAPFTSKLS R D L V K L 0 0 0 2 0 0 2 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1244.6136 Q9HD20 Q9HD20 940 950 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 3.1666E-07 190.02 By MS/MS 2 0.816 1 1 1 3 673070 673070 0 2512 2566 2594 6296;6297;6298 4538 4538 1 28170 0 DLEDKEGEIQAGAK ALSEQINIFFDYSGRDLEDKEGEIQAGAKL RDLEDKEGEIQAGAKLSLNRQFFDERWSKH R D L A K L 2 0 0 2 0 1 3 2 0 1 1 2 0 0 0 0 0 0 0 0 0 0 14 1 1501.726 Q13409 Q13409 251 264 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 3 0.0060745 89.46 By MS/MS 5 0 1 1 804580 804580 0 2513 1365 2595 6299 4539 4539 1 33071 0 DLEEAEGR LLTDQRDEILLANKKDLEEAEGRLAAPLLK ILLANKKDLEEAEGRLAAPLLKRLSLSTSK K D L G R L 1 1 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 917.40904 P54886 P54886 410 417 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.031446 98.629 By MS/MS 2 0.816 1 1 1 3 335620 335620 0 2514 1019 2596 6300;6301;6302 4540 4540 1 15852 0 DLEEDHACIPIK IIAGAGELHLEICLKDLEEDHACIPIKKSD CLKDLEEDHACIPIKKSDPVVSYRETVSEE K D L I K K 1 0 0 2 1 0 2 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 12 0 1438.6762 P13639 P13639 560 571 EEF2 Elongation factor 2 yes yes 2;3 0.00038666 143.89 By MS/MS 4.5 0.5 2 2 4 4112200 4112200 0 2515 576 2597 6303;6304;6305;6306 4541;4542 4542 2 118520 0 DLEEDHACIPIKK IIAGAGELHLEICLKDLEEDHACIPIKKSD LKDLEEDHACIPIKKSDPVVSYRETVSEES K D L K K S 1 0 0 2 1 0 2 0 1 2 1 2 0 0 1 0 0 0 0 0 0 0 13 1 1566.7712 P13639 P13639 560 572 EEF2 Elongation factor 2 yes yes 3 0.021415 77.387 By MS/MS 4.5 0.5 1 1 2 11660000 11660000 0 2516 576 2598 6307;6308 4543;4544 4544 2 333980 0 DLEEFFSTVGK RTVFCMQLAARIRPRDLEEFFSTVGKVRDV IRPRDLEEFFSTVGKVRDVRMISDRNSRRS R D L G K V 0 0 0 1 0 0 2 1 0 0 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1270.6081 Q14498 Q14498 168 178 RBM39 RNA-binding protein 39 yes yes 2 7.1961E-05 166.07 By MS/MS 5 1.41 1 1 1 1 1 5 2377200 2377200 0 2517 1433 2599 6309;6310;6311;6312;6313 4545;4546;4547;4548;4549 4547 5 46638 0 DLEEKLETLR PSPSKEEEGLRAQVRDLEEKLETLRLKRAE RAQVRDLEEKLETLRLKRAEDKAKLKELEK R D L L R L 0 1 0 1 0 0 3 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 10 1 1244.6612 Q14203 Q14203 226 235 DCTN1 Dynactin subunit 1 yes yes 2;3 3.852E-07 194.94 By MS/MS 3.75 0.829 2 1 1 4 5305100 5305100 0 2518 1420 2600 6314;6315;6316;6317 4550;4551 4550 2 143550 0 DLEEVKVLLEK ______________________________ ELQKDLEEVKVLLEKATRKRVRDALTAEKS K D L E K A 0 0 0 1 0 0 3 0 0 0 3 2 0 0 0 0 0 0 0 2 0 0 11 1 1313.7442 Q9HB71 Q9HB71 9 19 CACYBP Calcyclin-binding protein yes yes 2 3.8671E-10 208.6 By MS/MS 8 0 1 1 1127800 1127800 0 2519 2549 2601 6318 4552 4552 1 74403 0 DLEGSDIDTR DEEAFEDNSEEYIRRDLEGSDIDTRRRAAC EYIRRDLEGSDIDTRRRAACDLVRGLCKFF R D L T R R 0 1 0 3 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1119.5044 P55060 P55060 373 382 CSE1L Exportin-2 yes yes 2 2.2777E-10 196.79 By MS/MS 5 0.816 1 1 1 3 3352000 3352000 0 2520 1025 2602 6319;6320;6321 4553;4554 4553 2 88638 0 DLEGSDIDTRR DEEAFEDNSEEYIRRDLEGSDIDTRRRAAC YIRRDLEGSDIDTRRRAACDLVRGLCKFFE R D L R R R 0 2 0 3 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 11 1 1275.6055 P55060 P55060 373 383 CSE1L Exportin-2 yes yes 2 0.0050935 129.42 By MS/MS 4 0 1 1 1366700 1366700 0 2521 1025 2603 6322 4555 4555 1 37310 0 DLEIERPILGQNDNK QDNLQLFLNSYNGRRDLEIERPILGQNDNK DLEIERPILGQNDNKSKTLKCSTLLVVGDN R D L N K S 0 1 2 2 0 1 2 1 0 2 2 1 0 0 1 0 0 0 0 0 0 0 15 1 1752.9006 Q9UGV2 Q9UGV2 234 248 NDRG3 Protein NDRG3 yes yes 2 1.321E-19 222.72 By MS/MS 7 0.816 1 1 1 3 4413500 4413500 0 2522 2776 2604 6323;6324;6325 4556 4556 1 86416 0 DLEIKIPVVVR MRCDVIAQGIVMAVKDLEIKIPVVVRLQGT MAVKDLEIKIPVVVRLQGTRVDDAKALIAD K D L V R L 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 0 0 0 0 3 0 0 11 1 1279.7864 Q9P2R7 Q9P2R7 397 407 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 3 0.0040963 99.283 By MS/MS 7 0 1 1 1013800 1013800 0 2523 2741 2605 6326 4557 4557 1 18116 0 DLEKPFLLPVEAVYSVPGR KLLDAVDTYIPVPARDLEKPFLLPVEAVYS PFLLPVEAVYSVPGRGTVVTGTLERGILKK R D L G R G 1 1 0 1 0 0 2 1 0 0 3 1 0 1 3 1 0 0 1 3 0 0 19 1 2128.1568 P49411 P49411 253 271 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 0.0081362 112.57 By MS/MS 6.8 0.748 2 2 1 5 11803000 11803000 0 2524 918 2606 6327;6328;6329;6330;6331 4558;4559 4559 2 104510 0 DLENLGER KRTIEALMDRGAIVRDLENLGERALPYRIS DRGAIVRDLENLGERALPYRISAHSQQHNR R D L E R A 0 1 1 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 944.45632 P82932 P82932 38 45 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.0072772 128.61 By MS/MS 10 0 1 1 2946500 2946500 0 2525 1210 2607 6332 4560 4560 1 3131800 0 DLEPVLSVGVFNNK DFWRAGRKREDIQLKDLEPVLSVGVFNNKH KDLEPVLSVGVFNNKHSGLWHSGLIDKNLI K D L N K H 0 0 2 1 0 0 1 1 0 0 2 1 0 1 1 1 0 0 0 3 0 0 14 0 1529.809 O14657 O14657 242 255 TOR1B Torsin-1B yes yes 2 0.00026325 137.4 By MS/MS 8 0 1 1 209580 209580 0 2526 120 2608 6333 4561 4561 1 13826 0 DLEQGDVSETIR LFSRIFNCNPDDMARDLEQGDVSETIRVFF MARDLEQGDVSETIRVFFEQSKSFPPAAKS R D L I R V 0 1 0 2 0 1 2 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1360.647 P49916 P49916 344 355 LIG3 DNA ligase 3 yes yes 2 0.00077082 138.42 By MS/MS 4 0 1 1 0 0 0 2527 941 2609 6334 4562 4562 1 0 0 DLETSCSDIR LQGGQEATDIALLLRDLETSCSDIRQFCKK ALLLRDLETSCSDIRQFCKKIRRRMPGTDA R D L I R Q 0 1 0 2 1 0 1 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1194.5187 Q14203 Q14203 786 795 DCTN1 Dynactin subunit 1 yes yes 2 4.9015E-07 189.38 By MS/MS 3.5 0.5 1 1 2 2070600 2070600 0 2528 1420 2610 6335;6336 4563 4563 1 54283 0 DLFALAR EFLEMFVGVGPARVRDLFALARKNAPCILF GVGPARVRDLFALARKNAPCILFIDEIDAV R D L A R K 2 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 804.44939 Q9Y4W6 Q9Y4W6 391 397 AFG3L2 AFG3-like protein 2 yes yes 2 0.036285 110.61 By MS/MS 5 0 1 1 517020 517020 0 2529 2960 2611 6337 4564 4564 1 21252 0 DLFDPIIEDR VGCVAGDEESYEVFKDLFDPIIEDRHGGYK YEVFKDLFDPIIEDRHGGYKPSDEHKTDLN K D L D R H 0 1 0 3 0 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1231.6085 P12277 P12277 87 96 CKB Creatine kinase B-type yes yes 2 0.00048742 145.46 By MS/MS 7 0 1 1 5763100 5763100 0 2530 565 2612 6338 4565 4565 1 102990 0 DLFEDELVPLFEK QPSVGTEIFVGKIPRDLFEDELVPLFEKAG PRDLFEDELVPLFEKAGPIWDLRLMMDPLT R D L E K A 0 0 0 2 0 0 3 0 0 0 3 1 0 2 1 0 0 0 0 1 0 0 13 0 1592.7974 O60506 O60506 172 184 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 2 0.0003189 142.07 By MS/MS 5.5 0.5 1 1 2 538120 538120 0 2531 252 2613 6339;6340 4566;4567 4567 2 6325.6 0 DLFEPILSK NALYQYLHNGLDLRRDLFEPILSKLRGLKA GLDLRRDLFEPILSKLRGLKAVLERQASYR R D L S K L 0 0 0 1 0 0 1 0 0 1 2 1 0 1 1 1 0 0 0 0 0 0 9 0 1060.5805 Q92551 Q92551 306 314 IP6K1 Inositol hexakisphosphate kinase 1 yes yes 2 0.0061292 113.26 By MS/MS 6 0 1 1 727560 727560 0 2532 2058 2614 6341 4568 4568 1 5673.5 0 DLFHGATFVPR PYHKQRLAEYYGLYRDLFHGATFVPRVPLH GLYRDLFHGATFVPRVPLHVAYAVGEDDLM R D L P R V 1 1 0 1 0 0 0 1 1 0 1 0 0 2 1 0 1 0 0 1 0 0 11 0 1258.6459 Q96DV4 Q96DV4 160 170 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2;3 0.0030016 110.39 By MS/MS 7 0 2 2 2569900 2569900 0 2533 2155 2615 6342;6343 4569;4570 4570 2 45924 0 DLFQDTYHR AFLACAHLRAHIACRDLFQDTYHRYWASRQ AHIACRDLFQDTYHRYWASRQPDAATAGSL R D L H R Y 0 1 0 2 0 1 0 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 9 0 1193.5465 Q96D53 Q96D53 510 518 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.020713 96.331 By MS/MS 6 0 1 1 3124700 3124700 0 2534 2147 2616 6344 4571 4571 1 24367 0 DLFQVAFNR KGVTDHTQRLSIITKDLFQVAFNRVARGML LSIITKDLFQVAFNRVARGMLHQDHITFAM K D L N R V 1 1 1 1 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 9 0 1108.5665 Q14204 Q14204 3862 3870 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00046591 154.12 By MS/MS 2.5 1.12 1 1 1 1 4 1593800 1593800 0 2535 1421 2617 6345;6346;6347;6348 4572;4573;4574 4574 3 60096 0 DLFTCTIK PLDQPSSFDATPYIKDLFTCTIKRLKAADI DATPYIKDLFTCTIKRLKAADIDQEVKERA K D L I K R 0 0 0 1 1 0 0 0 0 1 1 1 0 1 0 0 2 0 0 0 0 0 8 0 996.49502 Q86VP6 Q86VP6 567 574 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.011773 117.4 By MS/MS 4 0.816 1 1 1 3 1026300 1026300 0 2536 1829 2618 6349;6350;6351 4575 4575 1 28242 0 DLGAYLR KLCEEWPVDETKRGRDLGAYLRQRVAQAFR VDETKRGRDLGAYLRQRVAQAFREGENTQV R D L L R Q 1 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 806.42865 Q9BRT2 Q9BRT2 26 32 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 2 0.024601 118.69 By MS/MS 10 0 1 1 735020 735020 0 2537 2329 2619 6352 4576 4576 1 781250 0 DLGDEYGWK YARYSKEEEMDDMDRDLGDEYGWKQVHGDV MDDMDRDLGDEYGWKQVHGDVFRPSSHPLI R D L W K Q 0 0 0 2 0 0 1 2 0 0 1 1 0 0 0 0 0 1 1 0 0 0 9 0 1081.4716 Q9HD45 Q9HD45 267 275 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 0.0010269 141.52 By MS/MS 1 0 1 1 257770 257770 0 2538 2568 2620 6353 4577 4577 1 12594 0 DLGFFGIYK EITTGPRVSALSVVRDLGFFGIYKGAKACF ALSVVRDLGFFGIYKGAKACFLRDIPFSAI R D L Y K G 0 0 0 1 0 0 0 2 0 1 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1058.5437 Q9UJS0 Q9UJS0 476 484 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.00045748 154.31 By MS/MS 5.38 2.5 1 1 1 1 1 1 1 1 8 14291000 14291000 0 2539 2798 2621 6354;6355;6356;6357;6358;6359;6360;6361 4578;4579;4580;4581;4582;4583 4583 6 564460 0 DLGGAAEGGAR LYFNELSSEGRQVLRDLGGAAEGGARVVVS QVLRDLGGAAEGGARVVVSLTEGTAVSEYW R D L A R V 3 1 0 1 0 0 1 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 972.46247 Q86UT6 Q86UT6 885 895 NLRX1 NLR family member X1 yes yes 2 0.001593 125.71 By MS/MS 4.5 0.5 1 1 2 1311900 1311900 0 2540 1825 2622 6362;6363 4584 4584 1 37162 0 DLGGFDEDAEPR GHLNRGFHQEVFLGKDLGGFDEDAEPRRSR LGKDLGGFDEDAEPRRSRRKLMVIFSKVDV K D L P R R 1 1 0 3 0 0 2 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 12 0 1319.563 Q9BRK5 Q9BRK5 86 97 SDF4 45 kDa calcium-binding protein yes yes 2 0.00025565 150.04 By MS/MS 6.5 0.5 1 1 2 7662000 7662000 0 2541 2324 2623 6364;6365 4585;4586;4587 4586 3 80841 0 DLGGLPIVAK LGNNAAYAFNRDIIRDLGGLPIVAKILNTR RDIIRDLGGLPIVAKILNTRDPIVKEKALI R D L A K I 1 0 0 1 0 0 0 2 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 981.58588 Q9UH62 Q9UH62 161 170 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 2 0.00070032 136.75 By MS/MS 7.5 0.5 1 1 2 1531200 1531200 0 2542 2777 2624 6366;6367 4588 4588 1 34796 0 DLGIFGLYK EITTGPRVSALNVLRDLGIFGLYKGAKACF ALNVLRDLGIFGLYKGAKACFLRDIPFSAI R D L Y K G 0 0 0 1 0 0 0 2 0 1 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1024.5593 O75746 O75746 474 482 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0028304 116.9 By MS/MS 5.5 0.5 1 1 2 2365000 2365000 0 2543 327 2625 6368;6369 4589 4589 1 89781 0 DLGLDPGK DLEKKMQSTLISAARDLGLDPGKQIKLDSS TLISAARDLGLDPGKQIKLDSSAQFGYYFR R D L G K Q 0 0 0 2 0 0 0 2 0 0 2 1 0 0 1 0 0 0 0 0 0 0 8 0 813.42323 P43246 P43246 502 509 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.042942 94.114 By MS/MS 4 0 1 1 347020 347020 0 2544 862 2626 6370 4590 4590 1 9473.3 0 DLGLSESGEDVNAAILDESGKK TFAIADEEDYAGEVKDLGLSESGEDVNAAI GEDVNAAILDESGKKFAMEPEEFDSDTLRE K D L K K F 2 0 1 3 0 0 3 3 0 1 3 2 0 0 0 3 0 0 0 1 0 0 22 1 2246.0914 P13667 P13667 464 485 PDIA4 Protein disulfide-isomerase A4 yes yes 3 0.048546 47.726 By MS/MS 5 0 1 1 973390 973390 0 2545 577 2627 6371 4591 4591 1 40010 0 DLGTESQIFISR IEQKFVSISDLLVPKDLGTESQIFISRTYD VPKDLGTESQIFISRTYDATTHFETTCDDI K D L S R T 0 1 0 1 0 1 1 1 0 2 1 0 0 1 0 2 1 0 0 0 0 0 12 0 1364.6936 P50395 P50395 391 402 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 7.3729E-11 199.19 By MS/MS 7 0 1 1 899950 899950 0 2546 944 2628 6372 4592 4592 1 16082 0 DLGVFIPAPMAQGMR NGPKTINQIRQDAVKDLGVFIPAPMAQGMR DLGVFIPAPMAQGMRSDFFLEGPFMPPRMK K D L M R S 2 1 0 1 0 1 0 2 0 1 1 0 2 1 2 0 0 0 0 1 0 0 15 0 1601.8058 P78344 P78344 333 347 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0048088 99.283 By MS/MS 4.25 0.433 3 1 4 3423500 3423500 0 2547 1192 2629;2630;2631 6373;6374;6375;6376 4593;4594;4595 4594 931;932 3 96404 0 DLHDANTDLIGR SKASLEKAGKSGVKKDLHDANTDLIGRHPK VKKDLHDANTDLIGRHPKQEKRSVFQTINQ K D L G R H 1 1 1 3 0 0 0 1 1 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1338.6528 P53985 P53985 225 236 SLC16A1 Monocarboxylate transporter 1 yes yes 3 0.00013814 151.55 By MS/MS 3.25 2.28 1 1 1 1 4 4389600 4389600 0 2548 1008 2632 6377;6378;6379;6380 4596;4597;4598;4599 4596 4 176680 0 DLHDANTDLIGRHPK SKASLEKAGKSGVKKDLHDANTDLIGRHPK DLHDANTDLIGRHPKQEKRSVFQTINQFLD K D L P K Q 1 1 1 3 0 0 0 1 2 1 2 1 0 0 1 0 1 0 0 0 0 0 15 1 1700.8594 P53985 P53985 225 239 SLC16A1 Monocarboxylate transporter 1 yes yes 2;3;4 0.0023666 124.47 By MS/MS 1.5 0.866 3 1 4 6945200 6945200 0 2549 1008 2633 6381;6382;6383;6384 4600;4601;4602;4603 4601 4 320330 0 DLHDANTDLIGRHPKQEK SKASLEKAGKSGVKKDLHDANTDLIGRHPK DANTDLIGRHPKQEKRSVFQTINQFLDLTL K D L E K R 1 1 1 3 0 1 1 1 2 1 2 2 0 0 1 0 1 0 0 0 0 0 18 2 2086.0556 P53985 P53985 225 242 SLC16A1 Monocarboxylate transporter 1 yes yes 4 0.0055293 79.346 By MS/MS 1 0 1 1 847020 847020 0 2550 1008 2634 6385 4604 4604 1 41384 0 DLHTNSPR VGATNVGSIRIYFDRDLHTNSPRHSKGSYN IRIYFDRDLHTNSPRHSKGSYNDFSFVTHT R D L P R H 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 8 0 938.45699 Q9UG56 Q9UG56 336 343 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.034062 97.602 By MS/MS 8 0 1 1 238680 238680 0 2551 2770 2635 6386 4605 4605 1 15746 0 DLHTTAFK LERLGRSRWQGELQRDLHTTAFKVDAGKLH WQGELQRDLHTTAFKVDAGKLHYHRKILNK R D L F K V 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 2 0 0 0 0 0 8 0 931.47633 Q12789 Q12789 196 203 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.05144 90.777 By MS/MS 2 0 1 1 713220 713220 0 2552 1306 2636 6387 4606 4606 1 35451 0 DLIEFGMIPEFVGR DIEEKDRLLRHVEARDLIEFGMIPEFVGRL RDLIEFGMIPEFVGRLPVVVPLHSLDEKTL R D L G R L 0 1 0 1 0 0 2 2 0 2 1 0 1 2 1 0 0 0 0 1 0 0 14 0 1621.8174 O76031 O76031 486 499 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 6.7595E-08 158.05 By MS/MS 5.67 0.471 1 2 3 576640 576640 0 2553 344 2637;2638 6388;6389;6390 4607;4608;4609 4608 188 3 6411.1 0 DLIHGAPVGKPAANR VLGEKTSNLRVKTLRDLIHGAPVGKPAANR DLIHGAPVGKPAANRAFVSMVYSEEGAEDR R D L N R A 3 1 1 1 0 0 0 2 1 1 1 1 0 0 2 0 0 0 0 1 0 0 15 1 1514.8318 Q14683 Q14683 63 77 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.019195 70.373 By MS/MS 3 0 1 1 994660 994660 0 2554 1440 2639 6391 4610 4610 1 25966 0 DLIIEQR ELLELASRMENERTKDLIIEQRFHRTIIGQ RMENERTKDLIIEQRFHRTIIGQKGERIRE K D L Q R F 0 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 885.49198 Q00341 Q00341 511 517 HDLBP Vigilin yes yes 2 0.053886 100.19 By MS/MS 3 0 1 1 883400 883400 0 2555 1231 2640 6392 4611 4611 1 23061 0 DLILPTIQK SCAPLLRYLSHSEFKDLILPTIQKSLLRSP SHSEFKDLILPTIQKSLLRSPENVIETISS K D L Q K S 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 0 1 0 0 0 0 0 9 0 1039.6277 Q92616 Q92616 260 268 GCN1L1 Translational activator GCN1 yes yes 2 0.043833 83.265 By MS/MS 2 0 1 1 322140 322140 0 2556 2068 2641 6393 4612 4612 1 16012 0 DLIQMLVQR EKIQGKITIENRSKKDLIQMLVQRGYESDP ENRSKKDLIQMLVQRGYESDPVKAWKEAQE K D L Q R G 0 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 9 0 1114.6169 Q02880 Q02880 1093 1101 TOP2B DNA topoisomerase 2-beta yes yes 2 0.005304 109.71 By MS/MS 3 0 1 1 107980 107980 0 2557 1258 2642 6394 4613 4613 1018 1 2818.9 0 DLISNSPR DVRCNEDQTRHVTSRDLISNSPRVIPVTSR TRHVTSRDLISNSPRVIPVTSRNRDNDPND R D L P R V 0 1 1 1 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 900.46649 P19387 P19387 119 126 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 2 0.01563 112.41 By MS/MS 8 0 1 1 1545700 1545700 0 2558 631 2643 6395 4614 4614 1 101970 0 DLKPENILVTSGGTVK LRGLDFLHANCIVHRDLKPENILVTSGGTV LKPENILVTSGGTVKLADFGLARIYSYQMA R D L V K L 0 0 1 1 0 0 1 2 0 1 2 2 0 0 1 1 2 0 0 2 0 0 16 1 1669.9251 P11802 P11802 140 155 CDK4 Cyclin-dependent kinase 4 yes yes 2;3 0.010275 117.48 By MS/MS 8.33 0.471 2 1 3 3012900 3012900 0 2559 558 2644 6396;6397;6398 4615;4616 4616 2 215340 0 DLKPENIVLQDVGGK GSGIRYLHENKIIHRDLKPENIVLQDVGGK DLKPENIVLQDVGGKIIHKIIDLGYAKDVD R D L G K I 0 0 1 2 0 1 1 2 0 1 2 2 0 0 1 0 0 0 0 2 0 0 15 1 1623.8832 O15111 O15111 144 158 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 3 0.038941 76.156 By MS/MS 5 0 1 1 552860 552860 0 2560 149 2645 6399 4617 4617 1 22725 0 DLKPENLLLASK LESVNHCHLNGIVHRDLKPENLLLASKSKG VHRDLKPENLLLASKSKGAAVKLADFGLAI R D L S K S 1 0 1 1 0 0 1 0 0 0 4 2 0 0 1 1 0 0 0 0 0 0 12 1 1339.7711 Q13557;Q9UQM7;Q13555;Q13554 Q13557 136 147 CAMK2D;CAMK2A;CAMK2G;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 2;3 0.0021929 132.14 By MS/MS 7.17 1.07 2 2 1 1 6 15119000 15119000 0 2561 1381 2646 6400;6401;6402;6403;6404;6405 4618;4619;4620 4619 3 238230 0 DLKPQNLLIDDK LQGIVFCHSRRVLHRDLKPQNLLIDDKGTI LHRDLKPQNLLIDDKGTIKLADFGLARAFG R D L D K G 0 0 1 3 0 1 0 0 0 1 3 2 0 0 1 0 0 0 0 0 0 0 12 1 1410.7718 P06493 P06493 128 139 CDK1 Cyclin-dependent kinase 1 yes yes 3 0.0043802 103.97 By MS/MS 8 0 1 1 2607900 2607900 0 2562 477 2647 6406 4621 4621 1 172040 0 DLKPQNLLIDDKGTIK LQGIVFCHSRRVLHRDLKPQNLLIDDKGTI LKPQNLLIDDKGTIKLADFGLARAFGIPIR R D L I K L 0 0 1 3 0 1 0 1 0 2 3 3 0 0 1 0 1 0 0 0 0 0 16 2 1810.02 P06493 P06493 128 143 CDK1 Cyclin-dependent kinase 1 yes yes 3;4 0.030479 61.524 By MS/MS 8 0 2 2 24717000 24717000 0 2563 477 2648 6407;6408 4622;4623 4623 2 1630600 0 DLKPQNLLINR LKGLGFCHSRNVLHRDLKPQNLLINRNGEL VLHRDLKPQNLLINRNGELKLADFGLARAF R D L N R N 0 1 2 1 0 1 0 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 11 1 1322.767 Q00535 Q00535 126 136 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.028905 112.3 By MS/MS 8 0 1 1 2358500 2358500 0 2564 1233 2649 6409 4624 4624 1 155590 0 DLKPQNLLINTEGAIK LQGLAFCHSHRVLHRDLKPQNLLINTEGAI LKPQNLLINTEGAIKLADFGLARAFGVPVR R D L I K L 1 0 2 1 0 1 1 1 0 2 3 2 0 0 1 0 1 0 0 0 0 0 16 1 1765.9938 P24941 P24941 127 142 CDK2 Cyclin-dependent kinase 2 yes yes 3 0.00013995 128.85 By MS/MS 8 0 1 1 520580 520580 0 2565 682 2650 6410 4625 4625 1 34343 0 DLLDLLVEAK LATSFFNERNINITKDLLDLLVEAKQEVPS INITKDLLDLLVEAKQEVPSWLENMAYEHH K D L A K Q 1 0 0 2 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 10 0 1127.6438 O00571;O15523 O00571 555 564 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 1.4799E-10 223.32 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 7501600 7501600 0 2566 105 2651 6411;6412;6413;6414;6415;6416;6417;6418 4626;4627;4628 4627 3 357180 0 DLLEVADVLEK LVEEAKLYGIQAFCKDLLEVADVLEKATQC AFCKDLLEVADVLEKATQCVPKEEIKDDNP K D L E K A 1 0 0 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1242.6707 Q9HAV7 Q9HAV7 110 120 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.0021895 119.53 By MS/MS 9 0.816 1 1 1 3 2729600 2729600 0 2567 2547 2652 6419;6420;6421 4629 4629 1 1542000 0 DLLFQALGR ______________________________ TVSVKRDLLFQALGRTYTDEEFDELCFEFG R D L G R T 1 1 0 1 0 1 0 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1031.5764 Q9NSD9 Q9NSD9 9 17 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.00086498 145.16 By MS/MS 5 0 1 1 1066600 1066600 0 2568 2623 2653 6422 4630 4630 1 43842 0 DLLGIIK ETSESQDSEKENTKKDLLGIIKGMKVELST SEKENTKKDLLGIIKGMKVELSTVNVRTTK K D L I K G 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 0 0 0 0 0 0 0 7 0 770.49019 Q92665 Q92665 98 104 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.0187 129.96 By MS/MS 7 0 1 1 3659100 3659100 0 2569 2073 2654 6423 4631 4631 1 65388 0 DLLHPSLEEEK ______________________________ PLARDLLHPSLEEEKKKHKKKRLVQSPNSY R D L E K K 0 0 0 1 0 0 3 0 1 0 3 1 0 0 1 1 0 0 0 0 0 0 11 0 1308.6561 Q71UM5 Q71UM5 6 16 RPS27L 40S ribosomal protein S27-like yes yes 2 0.014499 94.309 By MS/MS 10 0 1 1 178780 178780 0 2570 1755 2655 6424 4632 4632 1 190030 0 DLLHPSPEEEKRK ______________________________ AKDLLHPSPEEEKRKHKKKRLVQSPNSYFM K D L R K H 0 1 0 1 0 0 3 0 1 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1576.8209 P42677 P42677 6 18 RPS27 40S ribosomal protein S27 yes yes 3 0.010737 87.719 By MS/MS 10 0 1 1 2338500 2338500 0 2571 852 2656 6425 4633 4633 1 2485500 0 DLLKEFPQPK CVNPTPGGTISRASRDLLKEFPQPKNLLNS SRASRDLLKEFPQPKNLLNSVIGRALGISH R D L P K N 0 0 0 1 0 1 1 0 0 0 2 2 0 1 2 0 0 0 0 0 0 0 10 1 1213.6707 Q7L2E3 Q7L2E3 45 54 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0064723 128.6 By MS/MS 4 0.816 1 1 1 3 3735400 3735400 0 2572 1763 2657 6426;6427;6428 4634;4635 4634 2 101360 0 DLLLFLAER LGYQNFLYPSEPDLRDLLLFLAERLPTDAS SEPDLRDLLLFLAERLPTDASEDADQPAGD R D L E R L 1 1 0 1 0 0 1 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 9 0 1088.623 O60826 O60826 99 107 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 0.0021347 128.36 By MS/MS 5 0 1 1 227760 227760 0 2573 268 2658 6429 4636 4636 1 9361.9 0 DLLLHDQCQITTLR LQLNSLGPEACKDLRDLLLHDQCQITTLRL RDLLLHDQCQITTLRLSNNPLTAAGVAVLM R D L L R L 0 1 0 2 1 2 0 0 1 1 4 0 0 0 0 0 2 0 0 0 0 0 14 0 1724.888 Q86UT6 Q86UT6 772 785 NLRX1 NLR family member X1 yes yes 3 0.0015239 113.35 By MS/MS 4 0 1 1 1417400 1417400 0 2574 1825 2659 6430 4637 4637 1 38693 0 DLLLNTMSQEEK RLGLIEWLENTVTLKDLLLNTMSQEEKAAY TLKDLLLNTMSQEEKAAYLSDPRAPPCEYK K D L E K A 0 0 1 1 0 1 2 0 0 0 3 1 1 0 0 1 1 0 0 0 0 0 12 0 1419.6915 P78527 P78527 3814 3825 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.7032E-56 296.65 By MS/MS 2.57 1.4 2 2 1 1 1 7 2469000 2469000 0 2575 1197 2660;2661 6431;6432;6433;6434;6435;6436;6437 4638;4639;4640 4639 954 3 108670 0 DLLLQLEDETLK NNLHDPMSGGWGEGKDLLLQLEDETLKLVE EGKDLLLQLEDETLKLVEPQSQALLHAQPI K D L L K L 0 0 0 2 0 1 2 0 0 0 5 1 0 0 0 0 1 0 0 0 0 0 12 0 1428.7712 O00213 O00213 421 432 APBB1 Amyloid beta A4 precursor protein-binding family B member 1 yes yes 2 0.0017809 124.42 By MS/MS 4 0 1 1 100380 100380 0 2576 78 2662 6438 4641 4641 1 2740.2 0 DLLQADQLGSLK LKDGIQLSEYLPEVKDLLQADQLGSLKSNP EVKDLLQADQLGSLKSNPYFEFVLKANYEY K D L L K S 1 0 0 2 0 2 0 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 12 0 1299.7034 Q8WUM0 Q8WUM0 1124 1135 NUP133 Nuclear pore complex protein Nup133 yes yes 2 0.00082918 146.16 By MS/MS 3 0 1 1 0 0 0 2577 2018 2663 6439 4642 4642 1 0 0 DLLQNLLK TSLVNVVPKLNATGRDLLQNLLKCNPVQRI KLNATGRDLLQNLLKCNPVQRISAEEALQH R D L L K C 0 0 1 1 0 1 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 8 0 955.57023 Q00535 Q00535 261 268 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.0016808 161.9 By MS/MS 8 0 1 1 1263400 1263400 0 2578 1233 2664 6440 4643 4643 1 83346 0 DLLQSSYNK ILHIPDAHLWVKNCRDLLQSSYNKQRFDQP WVKNCRDLLQSSYNKQRFDQPLEASTWLKN R D L N K Q 0 0 1 1 0 1 0 0 0 0 2 1 0 0 0 2 0 0 1 0 0 0 9 0 1066.5295 P51398 P51398 167 175 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0065409 114.89 By MS/MS 7 0 1 1 8314700 8314700 0 2579 963 2665 6441 4644 4644 1 148590 0 DLLTGEQFIQLR HFQRFKEHVQNNLPRDLLTGEQFIQLRREL LPRDLLTGEQFIQLRRELASVNGHSGDDGP R D L L R R 0 1 0 1 0 2 1 1 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1431.7722 Q86UA1 Q86UA1 258 269 PRPF39 Pre-mRNA-processing factor 39 yes yes 2 1.9932E-08 178.46 By MS/MS 5 0 1 1 0 0 0 2580 1819 2666 6442 4645 4645 1 0 0 DLMACAQTGSGK TPVQKHAIPIIKEKRDLMACAQTGSGKTAA EKRDLMACAQTGSGKTAAFLLPILSQIYSD R D L G K T 2 0 0 1 1 1 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 12 0 1237.5431 O00571;O15523;Q9NQI0 O00571 219 230 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 9.5699E-05 155.48 By MS/MS By MS/MS 5 0 3 2 1 3110700 3087600 23178 2581 105 2667;2668 6443;6444;6445 4646;4647;4648 4648 70 3 126910 68585 DLMVGDEASELR PIIRSTTKVGNIEIKDLMVGDEASELRSML EIKDLMVGDEASELRSMLEVNYPMENGIVR K D L L R S 1 1 0 2 0 0 2 1 0 0 2 0 1 0 0 1 0 0 0 1 0 0 12 0 1333.6184 P61160 P61160 54 65 ACTR2 Actin-related protein 2 yes yes 2 0.0010139 127.83 By MS/MS 7 0 1 1 919600 919600 0 2582 1089 2669 6446 4649 4649 856 1 16433 0 DLNCNPNNK LLPADALVNCDLLLRDLNCNPNNKAKIGNK CDLLLRDLNCNPNNKAKIGNKP________ R D L N K A 0 0 4 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 9 0 1087.4717 O60343 O60343 1283 1291 TBC1D4 TBC1 domain family member 4 yes yes 2 0.00092826 143.73 By MS/MS 3 0 1 1 201430 201430 0 2583 246 2670 6447 4650 4650 1 5258.4 0 DLNCVPEIADTLGAVAK MAVGGAGGSRVSSGRDLNCVPEIADTLGAV NCVPEIADTLGAVAKQGFDFLCMPVFHPRF R D L A K Q 3 0 1 2 1 0 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 17 0 1784.8978 O14744 O14744 19 35 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3 0.0038748 84.653 By MS/MS 5 0 1 1 362540 362540 0 2584 125 2671 6448 4651 4651 1 14902 0 DLNFEVR DHVPLATPNGDVLIRDLNFEVRSGANVLIC PNGDVLIRDLNFEVRSGANVLICGPNGCGK R D L V R S 0 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 891.44503 P28288 P28288 458 464 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.040215 107.9 By MS/MS 4.5 0.5 1 1 2 1504200 1504200 0 2585 716 2672 6449;6450 4652 4652 1 59916 0 DLNSDMDSILASLK SGKGFYIYQEGVKRKDLNSDMDSILASLKL KDLNSDMDSILASLKLPPKSEVSSDEDIQF K D L L K L 1 0 1 3 0 0 0 0 0 1 3 1 1 0 0 3 0 0 0 0 0 0 14 0 1520.7392 P40939 P40939 647 660 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 2.0721E-46 276.12 By MS/MS 5 0 1 1 434550 434550 0 2586 835 2673 6451 4653 4653 585 1 17862 0 DLNSVLADNLK RLSTTVNSRAFNPGRDLNSVLADNLKSNPG NPGRDLNSVLADNLKSNPGIKWQYFSSEEG R D L L K S 1 0 2 2 0 0 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1200.635 Q5VU97 Q5VU97 169 179 CACHD1 VWFA and cache domain-containing protein 1 yes yes 2 0.0041469 131.12 By MS/MS 3 0 1 1 505540 505540 0 2587 1650 2674 6452 4654 4654 1 13197 0 DLNSYLEDK VDGHSSKNDIHTLLKDLNSYLEDKVYLTGY IHTLLKDLNSYLEDKVYLTGYNFTLADILL K D L D K V 0 0 1 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1095.5084 O43324 O43324 97 105 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.00011862 169.41 By MS/MS 9.5 0.5 1 1 2 1466100 1466100 0 2588 194 2675 6453;6454 4655;4656 4655 2 927710 0 DLPDEIPLPLVIGTK RLLQQRKVADVSQFKDLPDEIPLPLVIGTK DLPDEIPLPLVIGTKVTARLRGVHDGLFTG K D L T K V 0 0 0 2 0 0 1 1 0 2 3 1 0 0 3 0 1 0 0 1 0 0 15 0 1618.9182 Q5TKA1 Q5TKA1 211 225 LIN9 Protein lin-9 homolog yes yes 2 0.011713 90.697 By MS/MS 6 0 1 1 481280 481280 0 2589 1643 2676 6455 4657 4657 1 3753.1 0 DLPDVQELITQVR NEVNSDAGAFKNSLKDLPDVQELITQVRSE LKDLPDVQELITQVRSEKCSLQAAAILDAN K D L V R S 0 1 0 2 0 2 1 0 0 1 2 0 0 0 1 0 1 0 0 2 0 0 13 0 1524.8148 Q9UHB9 Q9UHB9 509 521 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.002557 116.74 By MS/MS 5.5 0.5 1 1 2 585290 585290 0 2590 2779 2677 6456;6457 4658 4658 1 16311 0 DLPFETLEVEAK NLRSFTKDAHALIYKDLPFETLEVEAKVAL IYKDLPFETLEVEAKVALEIFQHSKYKVDF K D L A K V 1 0 0 1 0 0 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 12 0 1389.7028 Q9NYK5 Q9NYK5 213 224 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 7.3014E-11 199.33 By MS/MS 8 0.816 1 1 1 3 4259700 4259700 0 2591 2696 2678 6458;6459;6460 4659 4659 1 327700 0 DLPGALDEKELIEK PQLQGIPVLVLGNKRDLPGALDEKELIEKM RDLPGALDEKELIEKMNLSAIQDREICCYS R D L E K M 1 0 0 2 0 0 3 1 0 1 3 2 0 0 1 0 0 0 0 0 0 0 14 1 1568.8298 Q96BM9 Q96BM9 133 146 ARL8A ADP-ribosylation factor-like protein 8A yes yes 2 0.025922 104.17 By MS/MS 9.5 0.5 1 1 2 857230 857230 0 2592 2128 2679 6461;6462 4660 4660 1 531760 0 DLPLLLFR GLNGAVFRPEVPLRRDLPLLLFRTQTSDPA PEVPLRRDLPLLLFRTQTSDPAMLPTMIGL R D L F R T 0 1 0 1 0 0 0 0 0 0 4 0 0 1 1 0 0 0 0 0 0 0 8 0 985.59605 O43175 O43175 462 469 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.00093077 173.93 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 61004000 61004000 0 2593 185 2680 6463;6464;6465;6466;6467;6468;6469;6470 4661;4662;4663;4664;4665;4666 4662 6 717950 0 DLPNALDEKQLIEK PQLQGIPVLVLGNKRDLPNALDEKQLIEKM RDLPNALDEKQLIEKMNLSAIQDREICCYS R D L E K M 1 0 1 2 0 1 2 0 0 1 3 2 0 0 1 0 0 0 0 0 0 0 14 1 1624.8672 Q9NVJ2 Q9NVJ2 133 146 ARL8B ADP-ribosylation factor-like protein 8B yes yes 2 0.00011169 164.13 By MS/MS 9 0 1 1 1186600 1186600 0 2594 2656 2681 6471 4667 4667 1 681010 0 DLPNIEVR ARMRHIPLAPGSDWRDLPNIEVRLSDGTMA APGSDWRDLPNIEVRLSDGTMARKLRYTHH R D L V R L 0 1 1 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 8 0 954.51345 P26358 P26358 1438 1445 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.022124 104.06 By MS/MS 3 0.816 1 1 1 3 697770 697770 0 2595 693 2682 6472;6473;6474 4668 4668 1 24559 0 DLPQDPVELAMFGLR WFPRFMNVNPFPVPRDLPQDPVELAMFGLR DLPQDPVELAMFGLRHMEPDLSARVTIYQV R D L L R H 1 1 0 2 0 1 1 1 0 0 3 0 1 1 2 0 0 0 0 1 0 0 15 0 1699.8603 Q9BQ95 Q9BQ95 218 232 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes yes 2 0.0069122 93.649 By MS/MS 7 0 1 1 519170 519170 0 2596 2308 2683 6475 4669 4669 1457 1 9277.7 0 DLPSADSVQYR HFFHSLMLYHEHLRKDLPSADSVQYRHLPS HLRKDLPSADSVQYRHLPSRGITQKEQDGL K D L Y R H 1 1 0 2 0 1 0 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1249.5939 Q92621 Q92621 572 582 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.00013311 157.66 By MS/MS 2 0.816 1 1 1 3 1190300 1190300 0 2597 2070 2684 6476;6477;6478 4670 4670 1 50329 0 DLPSAGEEILEVESEPR DEAYPSMPVGITGWRDLPSAGEEILEVESE PSAGEEILEVESEPRAREVVDWRKYEQEQE R D L P R A 1 1 0 1 0 0 5 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 17 0 1868.9004 P46199 P46199 423 439 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2;3 1.1173E-06 167.22 By MS/MS 5.14 1.25 1 1 2 2 1 7 5390600 5390600 0 2598 879 2685 6479;6480;6481;6482;6483;6484;6485 4671;4672;4673 4671 3 147750 0 DLPVSEQQER YYKDALRFLGCVDIKDLPVSEQQERAFTLG CVDIKDLPVSEQQERAFTLGLAGLLGEGVF K D L E R A 0 1 0 1 0 2 2 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1199.5782 Q9UNM6 Q9UNM6 187 196 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0020723 117.02 By MS/MS By matching 7 0 2 1 1 6976000 6935900 40149 2599 2845 2686 6486;6487 4674 4674 1 123950 164820 DLQANVEHLVQK GADAAYIFEEPFTIRDLQANVEHLVQKMKT TIRDLQANVEHLVQKMKTTVKRGLVLRNEK R D L Q K M 1 0 1 1 0 2 1 0 1 0 2 1 0 0 0 0 0 0 0 2 0 0 12 0 1392.7361 P08237 P08237 604 615 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 4.7167E-05 177.57 By MS/MS 5.5 0.5 1 1 2 1952800 1952800 0 2600 500 2687 6488;6489 4675 4675 1 56325 0 DLQDELAGNSEQR QEQIKQRTKLELKAKDLQDELAGNSEQRKR AKDLQDELAGNSEQRKRLLKERQKLLEKIE K D L Q R K 1 1 1 2 0 2 2 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 13 0 1473.6696 Q9UQE7 Q9UQE7 311 323 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 9.345E-12 203.39 By MS/MS 2.5 0.5 1 1 2 1635300 1635300 0 2601 2860 2688 6490;6491 4676;4677 4677 2 45040 0 DLQHPNEFIR RLLHEMILVCDAYRKDLQHPNEFIRGSTLR DAYRKDLQHPNEFIRGSTLRFLCKLKEAEL K D L I R G 0 1 1 1 0 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1267.6309 P53618 P53618 108 117 COPB1 Coatomer subunit beta yes yes 2;3 0.00015166 159.79 By MS/MS 3.43 1.4 1 1 1 2 2 7 18050000 18050000 0 2602 1004 2689 6492;6493;6494;6495;6496;6497;6498 4678;4679;4680 4678 3 534340 0 DLQLLQGSK QVLDLLKTSVVKSFKDLQLLQGSKFLQNLV VVKSFKDLQLLQGSKFLQNLVPHRSYVSTM K D L S K F 0 0 0 1 0 2 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1000.5553 Q9NVI1 Q9NVI1 340 348 FANCI Fanconi anemia group I protein yes yes 2 0.0014673 135.55 By MS/MS 3 0 1 1 470490 470490 0 2603 2654 2690 6499 4681 4681 1 12282 0 DLQMVNISLR IRARPRKISSPTGSKDLQMVNISLRVLSRP PTGSKDLQMVNISLRVLSRPNAQELPSMYQ K D L L R V 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1187.6332 Q99623 Q99623 98 107 PHB2 Prohibitin-2 yes yes 2 3.4625E-07 200.71 By MS/MS By MS/MS 8 0 3 2 1 16837000 16471000 365250 2604 2277 2691;2692 6500;6501;6502 4682;4683;4684 4683 1429 3 1086600 3116000 DLQNVNITLR CRSRPRNVPVITGSKDLQNVNITLRILFRP ITGSKDLQNVNITLRILFRPVASQLPRIFT K D L L R I 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1184.6513 P35232 P35232 84 93 PHB Prohibitin yes yes 2 1.0407E-10 210.64 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 86381000 85774000 607270 2605 782 2693 6503;6504;6505;6506 4685;4686;4687;4688 4686 4 6806200 5180700 DLQQQLVDAK YELREEHIDKVFKHKDLQQQLVDAKLQQAQ VFKHKDLQQQLVDAKLQQAQEMLKEAEERH K D L A K L 1 0 0 2 0 3 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1156.6088 P40222 P40222 331 340 TXLNA Alpha-taxilin yes yes 2 0.00080677 131.82 By MS/MS 5 0 1 1 1105300 1105300 0 2606 827 2694 6507 4689 4689 1 45432 0 DLQQYQSQAK LPLAASMQEDEQSGRDLQQYQSQAKQLFRK EQSGRDLQQYQSQAKQLFRKLNEQSPTRCT R D L A K Q 1 0 0 1 0 4 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 10 0 1207.5833 O75396 O75396 29 38 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 1.2223E-06 180.09 By MS/MS By matching 8.8 0.748 2 2 1 3 2 9322200 9262700 59426 2607 304 2695 6508;6509;6510;6511;6512 4690;4691 4691 2 4546200 583240 DLSDFPLIK NEQAAKVGDKTELFKDLSDFPLIKKRKDEI KTELFKDLSDFPLIKKRKDEIQGVIDEIRM K D L I K K 0 0 0 2 0 0 0 0 0 1 2 1 0 1 1 1 0 0 0 0 0 0 9 0 1046.5648 P20585 P20585 705 713 MSH3 DNA mismatch repair protein Msh3 yes yes 2 0.041651 84.498 By MS/MS 3 0 1 1 67848 67848 0 2608 642 2696 6513 4692 4692 1 1771.2 0 DLSEPYSIYTYR ESELQMPDIMRLITKDLSEPYSIYTYRYFI ITKDLSEPYSIYTYRYFIHNWPQLCFLAMV K D L Y R Y 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 2 1 0 3 0 0 0 12 0 1505.7038 Q147X3 Q147X3 234 245 NAA30 N-alpha-acetyltransferase 30 yes yes 2 0.0044463 108.9 By MS/MS 7 0 1 1 1100300 1100300 0 2609 1447 2697 6514 4693 4693 1 19662 0 DLSHIGDAVVISCAK CVVKMPSGEFARICRDLSHIGDAVVISCAK DLSHIGDAVVISCAKDGVKFSASGELGNGN R D L A K D 2 0 0 2 1 0 0 1 1 2 1 1 0 0 0 2 0 0 0 2 0 0 15 0 1583.7977 P12004 P12004 150 164 PCNA Proliferating cell nuclear antigen yes yes 2 7.8201E-06 150.51 By MS/MS 7.5 0.5 1 1 2 986180 986180 0 2610 561 2698 6515;6516 4694 4694 1 55845 0 DLSIEEYIR ELGDVQALSLWQKFRDLSIEEYIRVYKRLG LWQKFRDLSIEEYIRVYKRLGVYFDEYSGE R D L I R V 0 1 0 1 0 0 2 0 0 2 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1136.5714 Q5T160 Q5T160 246 254 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.00091101 144.12 By MS/MS 6 0 1 1 1587600 1587600 0 2611 1624 2699 6517 4695 4695 1 12380 0 DLSLDDFK APYFKGTAVVNGEFKDLSLDDFKGKYLVLF VVNGEFKDLSLDDFKGKYLVLFFYPLDFTF K D L F K G 0 0 0 3 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 8 0 951.45493 P30048 P30048 84 91 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.0104 119.17 By MS/MS 9.5 0.5 1 1 2 1919800 1919800 0 2612 731 2700 6518;6519 4696 4696 1 1137500 0 DLSLLQIQMR RNALKWDKDNLQILRDLSLLQIQMRDLEGY LQILRDLSLLQIQMRDLEGYRETRYQLLQL R D L M R D 0 1 0 1 0 2 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 0 10 0 1215.6645 Q9BXJ9;Q6N069 Q9BXJ9 119 128 NAA15;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 2 8.2217E-11 205.12 By MS/MS 4 0 2 2 1466300 1466300 0 2613 2401 2701;2702 6520;6521 4697;4698 4697 1481 2 40029 0 DLSSEELAAFQK SIIGSARSLGIRVVKDLSSEELAAFQKERA VVKDLSSEELAAFQKERAIFLAAQKEADLA K D L Q K E 2 0 0 1 0 1 2 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 12 0 1336.6511 Q9Y3B7 Q9Y3B7 158 169 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 4.8505E-33 261.6 By MS/MS By matching 9 0 2 1 1 3607300 3532200 75010 2614 2927 2703 6522;6523 4699 4699 1 2027200 808400 DLSSEELAAFQKER SIIGSARSLGIRVVKDLSSEELAAFQKERA KDLSSEELAAFQKERAIFLAAQKEADLAAQ K D L E R A 2 1 0 1 0 1 3 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 14 1 1621.7948 Q9Y3B7 Q9Y3B7 158 171 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2;3 0.00056554 162.49 By MS/MS 9 0 2 2 1560600 1560600 0 2615 2927 2704 6524;6525 4700;4701 4700 2 895630 0 DLSSLLQAVGR ITAENDCRRLHCSLRDLSSLLQAVGRLAEY CSLRDLSSLLQAVGRLAEYFIGDVFAARFN R D L G R L 1 1 0 1 0 1 0 1 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1157.6404 Q96QU8 Q96QU8 556 566 XPO6 Exportin-6 yes yes 2 0.0016274 145.89 By MS/MS 4 0 1 1 0 0 0 2616 2243 2705 6526 4702 4702 1 0 0 DLSTVEALQNLK CPNLTYLNLSGNKIKDLSTVEALQNLKNLK KIKDLSTVEALQNLKNLKSLDLFNCEITNL K D L L K N 1 0 1 1 0 1 1 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 12 0 1329.714 Q9BTT0 Q9BTT0 102 113 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 2 5.15E-33 261.03 By MS/MS 9 0.816 1 1 1 3 13022000 13022000 0 2617 2352 2706 6527;6528;6529 4703;4704 4703 2 1109900 0 DLTCAVITEFAR SANEVFYNPVQEFNRDLTCAVITEFARIQL FNRDLTCAVITEFARIQLGAKGIQIKVPGE R D L A R I 2 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 2 0 0 1 0 0 12 0 1394.6864 Q9NXH9 Q9NXH9 83 94 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 5.2995E-05 175.65 By MS/MS 5 0 1 1 360060 360060 0 2618 2688 2707 6530 4705 4705 1 14800 0 DLTDYLMK YALPHAILRLDLAGRDLTDYLMKILTERGY RLDLAGRDLTDYLMKILTERGYSFTTTAER R D L M K I 0 0 0 2 0 0 0 0 0 0 2 1 1 0 0 0 1 0 1 0 0 0 8 0 997.47903 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P60709 184 191 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 2 0.0017072 153.73 By MS/MS By MS/MS 7 0 3 2 1 7544500 7450700 93780 2619 1072;1179;1593 2708;2709 6531;6532;6533 4706;4707;4708 4707 835 3 133150 384980 DLTEYLSR GKMFIGGLSWDTSKKDLTEYLSRFGEVVDC SWDTSKKDLTEYLSRFGEVVDCTIKTDPVT K D L S R F 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 8 0 995.49238 O14979 O14979 163 170 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2 0.0022231 155.75 By MS/MS 7.5 0.5 1 1 2 2675100 2675100 0 2620 141 2710 6534;6535 4709;4710 4709 2 80277 0 DLTGQVPTPVVK LKHLDFLKQPLATQKDLTGQVPTPVVKQTK TQKDLTGQVPTPVVKQTKLKQRADSRESLK K D L V K Q 0 0 0 1 0 1 0 1 0 0 1 1 0 0 2 0 2 0 0 3 0 0 12 0 1252.7027 P46821 P46821 520 531 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0055676 103.34 By MS/MS 1 0 1 1 198240 198240 0 2621 890 2711 6536 4711 4711 1 9685.9 0 DLTIPGLSPAER TEFYVMEHVQGRIFRDLTIPGLSPAERSAI IFRDLTIPGLSPAERSAIYVATVETLAQLH R D L E R S 1 1 0 1 0 0 1 1 0 1 2 0 0 0 2 1 1 0 0 0 0 0 12 0 1267.6772 Q709F0 Q709F0 131 142 ACAD11 Acyl-CoA dehydrogenase family member 11 yes yes 2 0.012081 94.692 By MS/MS 4.5 0.5 1 1 2 852490 852490 0 2622 1750 2712 6537;6538 4712 4712 1 33463 0 DLTQEQTEK ______________________________ AAPEERDLTQEQTEKLLQFQDLTGIESMDQ R D L E K L 0 0 0 1 0 2 2 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 9 0 1090.5142 Q96CS3 Q96CS3 8 16 FAF2 FAS-associated factor 2 yes yes 2 4.4615E-08 203.29 By MS/MS By matching 6 0 2 1 1 16399000 16353000 45789 2623 2140 2713 6539;6540 4713 4713 1 127520 140430 DLTTAGAVTQCYR YDSRSGTHNMYREYRDLTTAGAVTQCYRDM YRDLTTAGAVTQCYRDMGARHRARAHSIQI R D L Y R D 2 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 3 0 1 1 0 0 13 0 1454.6824 Q02543 Q02543 99 111 RPL18A 60S ribosomal protein L18a yes yes 2 0.00073097 160.18 By MS/MS 9 0 1 1 498140 498140 0 2624 1254 2714 6541 4714 4714 1 285880 0 DLVAQAPLKPK KIHPLVRLPLATIVKDLVAQAPLKPKTPRG TIVKDLVAQAPLKPKTPRGTKTPINRNQLS K D L P K T 2 0 0 1 0 1 0 0 0 0 2 2 0 0 2 0 0 0 0 1 0 0 11 1 1178.7023 O94776 O94776 523 533 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.0206 117.01 By MS/MS 5.5 0.5 1 1 2 3608300 3608300 0 2625 349 2715 6542;6543 4715 4715 1 119190 0 DLVDDFRIR LPTASRKLQFLELQKDLVDDFRIRLTQVMK FLELQKDLVDDFRIRLTQVMKEETRASLGF K D L I R L 0 2 0 3 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 9 1 1147.5986 Q6NUQ1 Q6NUQ1 511 519 RINT1 RAD50-interacting protein 1 yes yes 2 0.0088866 138.4 By MS/MS 5 0 1 1 267090 267090 0 2626 1692 2716 6544 4716 4716 1 10978 0 DLVETTHLFLK FRKFDERCQPRSFLRDLVETTHLFLKMLER SFLRDLVETTHLFLKMLERFCRSRGNLVVQ R D L L K M 0 0 0 1 0 0 1 0 1 0 3 1 0 1 0 0 2 0 0 1 0 0 11 0 1314.7184 Q9UNS1 Q9UNS1 501 511 TIMELESS Protein timeless homolog yes yes 2 0.0012237 130.66 By MS/MS 3 0 1 1 278490 278490 0 2627 2846 2717 6545 4717 4717 1 7270 0 DLVNIGLK TRILYTLVDWFPVFRDLVNIGLKAFAFCVA DWFPVFRDLVNIGLKAFAFCVATSLTLLTV R D L L K A 0 0 1 1 0 0 0 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 870.51747 Q9BTV4 Q9BTV4 342 349 TMEM43 Transmembrane protein 43 yes yes 2 0.021852 104.37 By MS/MS 7 0 1 1 1626500 1626500 0 2628 2353 2718 6546 4718 4718 1 29066 0 DLVQDPSLLGGTISAYK CFRNLAEDRSGINLKDLVQDPSLLGGTISA VQDPSLLGGTISAYKIVPDEIEEIKETLID K D L Y K I 1 0 0 2 0 1 0 2 0 1 3 1 0 0 1 2 1 0 1 1 0 0 17 0 1775.9305 Q9NQX3 Q9NQX3 41 57 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 2 3.0944E-07 188.59 By MS/MS 4 0 1 1 324480 324480 0 2629 2594 2719 6547 4719 4719 1 8858 0 DLVSSLTSGLLTIGDR VSGAHNTIICARAGKDLVSSLTSGLLTIGD LVSSLTSGLLTIGDRFGGALDAAAKMFSKA K D L D R F 0 1 0 2 0 0 0 2 0 1 4 0 0 0 0 3 2 0 0 1 0 0 16 0 1645.8887 P53396 P53396 919 934 ACLY ATP-citrate synthase yes yes 2 0.03307 73.435 By MS/MS 4 0 1 1 23300 23300 0 2630 1001 2720 6548 4720 4720 1 636.06 0 DLYANTVLSGGTTMYPGIADR TTFNSIMKCDVDIRKDLYANTVLSGGTTMY VLSGGTTMYPGIADRMQKEITALAPSTMKI K D L D R M 2 1 1 2 0 0 0 3 0 1 2 0 1 0 1 1 3 0 2 1 0 0 21 0 2214.0627 P60709;P63261 P60709 292 312 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 2.665E-13 172.91 By MS/MS By matching 7 0 2 1 1 1108900 1069200 39745 2631 1072;1179 2721 6549;6550 4721 4721 836 1 19107 163160 DLYEDELVPLFEK QPGIGTEVFVGKIPRDLYEDELVPLFEKAG PRDLYEDELVPLFEKAGPIWDLRLMMDPLS R D L E K A 0 0 0 2 0 0 3 0 0 0 3 1 0 1 1 0 0 0 1 1 0 0 13 0 1608.7923 O43390 O43390 175 187 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 2 0.0032016 113.22 By MS/MS 5 0 1 1 117160 117160 0 2632 196 2722 6551 4722;4723 4723 2 4815.7 0 DLYVNIQPVQEPK DMAAAAVRCIRKEIRDLYVNIQPVQEPKDQ IRDLYVNIQPVQEPKDQAFGNGNGIIIIAE R D L P K D 0 0 1 1 0 2 1 0 0 1 1 1 0 0 2 0 0 0 1 2 0 0 13 0 1541.809 O00442 O00442 224 236 RTCA RNA 3-terminal phosphate cyclase yes yes 2 1.5362E-05 191.26 By MS/MS 7.5 0.5 1 1 2 2514300 2514300 0 2633 95 2723 6552;6553 4724 4724 1 69190 0 DMAEMQRVWKEK QEITSLRMKLHQQERDMAEMQRVWKEKFEQ QERDMAEMQRVWKEKFEQAEKRKLQETKEL R D M E K F 1 1 0 1 0 1 2 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 12 2 1549.7381 Q15058 Q15058 761 772 KIF14 Kinesin-like protein KIF14 yes yes 2 0.018541 114.86 By MS/MS By MS/MS 5.5 2.96 1 1 2 1 1 1 1 5 3 47692000 23715000 23977000 2634 1475 2724 6554;6555;6556;6557;6558;6559;6560;6561 4725;4726 4726 1152 2 9269700 35969000 DMAGAQAAAVALNEEFLR TTETTKTARATGASRDMAGAQAAAVALNEE GAQAAAVALNEEFLRNYFTDKAASYTEEDE R D M L R N 6 1 1 1 0 1 2 1 0 0 2 0 1 1 0 0 0 0 0 1 0 0 18 0 1875.9149 Q14126 Q14126 756 773 DSG2 Desmoglein-2 yes yes 2 7.6176E-11 164.15 By MS/MS 3 0 1 1 184410 184410 0 2635 1407 2725 6562 4727 4727 1079 1 4814.1 0 DMDELKK SEQGDKKGKKGKKDRDMDELKKEVSMDDHK GKKGKKDRDMDELKKEVSMDDHKLSLDELH R D M K K E 0 0 0 2 0 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 7 1 877.42152 P05023 P05023 31 37 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.032955 158.36 By MS/MS 2 0.816 1 1 1 3 932310 932310 0 2636 463 2726 6563;6564;6565 4728 4728 1 42624 0 DMEALLPLMNMVIYSIDK LFTFNVPGSGNTYPKDMEALLPLMNMVIYS ALLPLMNMVIYSIDKAKKFRLNREGKQKAD K D M D K A 1 0 1 2 0 0 1 0 0 2 3 1 3 0 1 1 0 0 1 1 0 0 18 0 2095.0404 Q96A33 Q96A33 375 392 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 0.025553 54.524 By MS/MS 6 0 1 1 42720 42720 0 2637 2114 2727 6566 4729 4729 1380;1381 1 333.13 0 DMEANLLPGFLR DQTVYIVLDKAEYLRDMEANLLPGFLRLQE YLRDMEANLLPGFLRLQELADRNVTVLFLS R D M L R L 1 1 1 1 0 0 1 1 0 0 3 0 1 1 1 0 0 0 0 0 0 0 12 0 1374.6966 O43913 O43913 132 143 ORC5 Origin recognition complex subunit 5 yes yes 2 3.317E-05 166.34 By MS/MS 7 0 1 1 675770 675770 0 2638 233 2728 6567 4730 4730 137 1 12076 0 DMEDPTPVPNIEEVVLPK RRSQKEEDEQEDLTKDMEDPTPVPNIEEVV DPTPVPNIEEVVLPKNVNLKKDSENTPVKG K D M P K N 0 0 1 2 0 0 3 0 0 1 1 1 1 0 4 0 1 0 0 3 0 0 18 0 2021.0027 Q92922 Q92922 370 387 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.004781 90.926 By MS/MS 3 0 1 1 135620 135620 0 2639 2090 2729 6568 4731 4731 1363 1 3540.5 0 DMFEEALR LFEDIRGQSDIAITKDMFEEALRALADDDF SDIAITKDMFEEALRALADDDFLTVTGKTV K D M L R A 1 1 0 1 0 0 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 1009.4539 P33991 P33991 838 845 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.0022231 155.75 By MS/MS 4.33 0.471 2 1 3 1533400 1533400 0 2640 773 2730;2731 6569;6570;6571 4732;4733 4733 523 2 43307 0 DMGEDLECLCQIMR CIKTLLEKKKRVQLKDMGEDLECLCQIMRT KDMGEDLECLCQIMRTVGPRLDHERAKSLM K D M M R T 0 1 0 2 2 1 2 1 0 1 2 0 2 0 0 0 0 0 0 0 0 0 14 0 1768.7252 P78344 P78344 246 259 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 2.3268E-12 205.12 By MS/MS 4 0 2 2 276790 276790 0 2641 1192 2732;2733 6572;6573 4734;4735 4734 933 2 7556.1 0 DMGGYSTTTDFIK DAVKKVIKVGKVRTRDMGGYSTTTDFIKSV TRDMGGYSTTTDFIKSVIGHLQTKGS____ R D M I K S 0 0 0 2 0 0 0 2 0 1 0 1 1 1 0 1 3 0 1 0 0 0 13 0 1434.6337 O43837 O43837 362 374 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2 2.8245E-05 161.67 By MS/MS 7 0 2 2 3858600 3858600 0 2642 230 2734;2735 6574;6575 4736;4737 4736 135 2 68954 0 DMGSCEIYPQTIQHNPNGR DAEIKDGERLPLAVKDMGSCEIYPQTIQHN CEIYPQTIQHNPNGRFVVVCGDGEYIIYTA K D M G R F 0 1 2 1 1 2 1 2 1 2 0 0 1 0 2 1 1 0 1 0 0 0 19 0 2215.9739 P35606 P35606 347 365 COPB2 Coatomer subunit beta yes yes 3 0.014261 66.809 By MS/MS 1.5 0.5 1 1 2 299720 299720 0 2643 795 2736 6576;6577 4738 4738 542 1 14710 0 DMLEAGILDTYLGK KNVGLDIEAEVPAVKDMLEAGILDTYLGKY KDMLEAGILDTYLGKYWAIKLATNAAVTVL K D M G K Y 1 0 0 2 0 0 1 2 0 1 3 1 1 0 0 0 1 0 1 0 0 0 14 0 1537.7698 P50990 P50990 491 504 CCT8 T-complex protein 1 subunit theta yes yes 2;3 4.1665E-12 203.03 By MS/MS 6.62 2.12 1 1 3 1 1 1 8 32987000 32987000 0 2644 955 2737;2738 6578;6579;6580;6581;6582;6583;6584;6585 4739;4740;4741;4742;4743;4744;4745;4746 4745 703 8 365420 0 DMLIRQKGEELK D M L K 0 1 0 1 0 1 2 1 0 1 2 2 1 0 0 0 0 0 0 0 0 0 12 2 1458.7864 REV__Q16281 yes yes 2 0.0016249 148.69 By MS/MS 6 2.61 1 1 1 1 1 5 63899000 0 63899000 + 2645 3030 2739 6586;6587;6588;6589;6590 4747;4748;4749;4750;4751 4749 1744 5 0 151570000 DMPIQAFLLYQEPVLGPVR KVLPVPQKAVPYPQRDMPIQAFLLYQEPVL QAFLLYQEPVLGPVRGPFPIIV________ R D M V R G 1 1 0 1 0 2 1 1 0 1 3 0 1 1 3 0 0 0 1 2 0 0 19 0 2185.1605 CON__P02666 CON__P02666 184 202 yes yes 2;3 1.0774E-11 169.98 By MS/MS 5.5 0.5 2 2 4 6264500 6264500 0 + 2646 39 2740 6591;6592;6593;6594 4752;4753 4752 23 2 51682 0 DMSALVAAR RGAQYQPILRDHICKDMSALVAARMRHIPL RDHICKDMSALVAARMRHIPLAPGSDWRDL K D M A R M 3 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 9 0 932.47495 P26358 P26358 1416 1424 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.055746 80.438 By MS/MS 2 0 1 1 112860 112860 0 2647 693 2741 6595 4754 4754 1 5609.9 0 DMSDNVLYQNR GPGRNMPNSQMVNIRDMSDNVLYQNRNYHL VNIRDMSDNVLYQNRNYHLTPRTSLHTASS R D M N R N 0 1 2 2 0 1 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 11 0 1353.5983 Q7Z353 Q7Z353 359 369 HDX Highly divergent homeobox yes yes 2 0.040797 74.165 By matching By MS/MS 4.5 0.5 1 1 1 1 190050 148550 41497 2648 1780 2742 6596;6597 4755 4755 1259 1 6106.2 86711 DMSGHYQNALYLGDVSER LEKLRKMMKIAEIRKDMSGHYQNALYLGDV GHYQNALYLGDVSERVRILKNCGQKSLAYL K D M E R V 1 1 1 2 0 1 1 2 1 0 2 0 1 0 0 2 0 0 2 1 0 0 18 0 2053.9164 P53621 P53621 728 745 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.018003 69.522 By MS/MS 1 0 1 1 256280 256280 0 2649 1005 2743 6598 4756 4756 778 1 12522 0 DMTMFVTASK VKEHSRQINDIQLSRDMTMFVTASKDNTAK IQLSRDMTMFVTASKDNTAKLFDSTTLEHQ R D M S K D 1 0 0 1 0 0 0 0 0 0 0 1 2 1 0 1 2 0 0 1 0 0 10 0 1129.5148 Q13347 Q13347 199 208 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 3.1466E-05 173.39 By MS/MS 7.5 0.5 1 1 2 1194500 1194500 0 2650 1358 2744 6599;6600 4757;4758 4758 2 54856 0 DMTSEQLDDILK PRDAKACVVHGSDLKDMTSEQLDDILKYHT DLKDMTSEQLDDILKYHTEIVFARTSPQQK K D M L K Y 0 0 0 3 0 1 1 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 12 0 1406.6599 P05023 P05023 672 683 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 4.303E-11 205.52 By MS/MS 3 1.41 2 2 2 2 2 10 2606900 2606900 0 2651 463 2745;2746 6601;6602;6603;6604;6605;6606;6607;6608;6609;6610 4759;4760;4761;4762;4763 4763 248 5 92867 0 DNALLSAIEESR PVKDTDIQGFLKNEKDNALLSAIEESRKRT NEKDNALLSAIEESRKRTFGMAEEYHRESM K D N S R K 2 1 1 1 0 0 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 12 0 1316.6572 Q8N1F7 Q8N1F7 107 118 NUP93 Nuclear pore complex protein Nup93 yes yes 2 1.2849E-07 191.79 By MS/MS 4.5 0.5 1 1 2 720140 720140 0 2652 1898 2747 6611;6612 4764;4765 4765 2 27547 0 DNALTLLIK LLDLLTEVGVSGQGRDNALTLLIKAVPRKS VSGQGRDNALTLLIKAVPRKSLKDPNNSLT R D N I K A 1 0 1 1 0 0 0 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 9 0 999.59645 Q9H3U1 Q9H3U1 313 321 UNC45A Protein unc-45 homolog A yes yes 2 3.0348E-14 229.55 By MS/MS 4.5 0.5 1 1 2 0 0 0 2653 2493 2748 6613;6614 4766;4767 4766 2 0 0 DNCPLVANLVTASLR AHDRMDCKGLEAVRRDNCPLVANLVTASLR DNCPLVANLVTASLRRLLIDRDPEGAVAHA R D N L R R 2 1 2 1 1 0 0 0 0 0 3 0 0 0 1 1 1 0 0 2 0 0 15 0 1641.8508 P28340 P28340 835 849 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.0024413 113.69 By MS/MS 3.5 0.5 1 1 2 211030 211030 0 2654 719 2749 6615;6616 4768 4768 1 5579.6 0 DNEGSWFR AGDVASAAAARFYSKDNEGSWFRSLFVHKV AARFYSKDNEGSWFRSLFVHKVDPRKDAHS K D N F R S 0 1 1 1 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 8 0 1009.4254 Q9BPW8 Q9BPW8 38 45 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.0085164 123.98 By MS/MS 8 0 1 1 1012400 1012400 0 2655 2301 2750 6617 4769 4769 1 66786 0 DNGVVPVVK TQKAARNMSYQGFTKDNGVVPVVKELMGEE YQGFTKDNGVVPVVKELMGEEILGASLSAP K D N V K E 0 0 1 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 4 0 0 9 0 925.52328 Q9P2J5 Q9P2J5 342 350 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0024484 124.98 By MS/MS 3 0 1 1 1387800 1387800 0 2656 2738 2751 6618 4770 4770 1 36228 0 DNHLLGTFDLTGIPPAPR TVTIKVYEGERPLTKDNHLLGTFDLTGIPP LLGTFDLTGIPPAPRGVPQIEVTFEIDVNG K D N P R G 1 1 1 2 0 0 0 2 1 1 3 0 0 1 3 0 2 0 0 0 0 0 18 0 1933.0058 P11021 P11021 475 492 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0066753 80.609 By MS/MS 5.5 0.5 1 1 2 1364100 1364100 0 2657 545 2752 6619;6620 4771 4771 1 27297 0 DNICGALAR LLFPLLARERHDRVRDNICGALARLLMASP RHDRVRDNICGALARLLMASPTRKPEPQVL R D N A R L 2 1 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 988.47601 Q8TEX9 Q8TEX9 959 967 IPO4 Importin-4 yes yes 2 0.021239 96.034 By MS/MS 4.5 0.5 1 1 2 789660 789660 0 2658 2005 2753 6621;6622 4772 4772 1 23112 0 DNIFVLR D N L R 0 1 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 875.4865 REV__Q8TBY9 yes yes 2 0.0099715 154.09 By MS/MS 4.33 0.471 2 1 3 2974500 2974500 0 + 2659 3038 2754 6623;6624;6625 4773 4773 1 84368 0 DNIQGITKPAIR GLGKGGAKRHRKVLRDNIQGITKPAIRRLA VLRDNIQGITKPAIRRLARRGGVKRISGLI R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 P62805 P62805 25 36 HIST1H4A Histone H4 yes yes 2;3 0.0017796 136.96 By MS/MS 10 0 2 2 1062100 1062100 0 2660 1144 2755 6626;6627 4774;4775 4774 2 1128900 0 DNITNNTAAATVR LSKAIVLCFRLHFTKDNITNNTAAATVRQV TKDNITNNTAAATVRQVVTVVFERMVAEDE K D N V R Q 3 1 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 0 0 1 0 0 13 0 1359.6743 Q7Z3U7 Q7Z3U7 158 170 MON2 Protein MON2 homolog yes yes 2 9.2099E-35 295.26 By MS/MS 3.5 0.5 1 1 2 1038900 1038900 0 2661 1786 2756 6628;6629 4776 4776 1 27253 0 DNKAGGAVPK D N P K 2 0 1 1 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 10 1 955.50869 REV__Q9UGN5 yes yes 3 0.012853 82.261 By MS/MS 3 0 1 1 834790 834790 0 + 2662 3048 2757 6630 4777 4777 1 21792 0 DNKQAGVFEPTIVK NLKWIGLDLSNGKPRDNKQAGVFEPTIVKV RDNKQAGVFEPTIVKVKSLKFATEAAITIL R D N V K V 1 0 1 1 0 1 1 1 0 1 0 2 0 1 1 0 1 0 0 2 0 0 14 1 1544.8199 P17987 P17987 497 510 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 3.0851E-08 225.79 By MS/MS 5.2 1.99 1 1 1 2 2 2 1 10 95603000 95603000 0 2663 619 2758 6631;6632;6633;6634;6635;6636;6637;6638;6639;6640 4778;4779;4780 4779 3 862090 0 DNLEFFLAGIGR KPSCTIIPLMKKDHRDNLEFFLAGIGRLHL DHRDNLEFFLAGIGRLHLSGIDANPNALFP R D N G R L 1 1 1 1 0 0 1 2 0 1 2 0 0 2 0 0 0 0 0 0 0 0 12 0 1350.6932 P49327 P49327 791 802 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00017253 153.95 By MS/MS 3.5 1.12 1 1 1 1 4 745400 745400 0 2664 915 2759 6641;6642;6643;6644 4781;4782;4783;4784 4783 4 23186 0 DNLEWLAR NSFMHCGTTSDQFLRDNLEWLARATNWAKF TSDQFLRDNLEWLARATNWAKFTATASLGV R D N A R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 8 0 1015.5087 Q99460 Q99460 388 395 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.0030197 149.82 By MS/MS 4.5 1.12 1 1 1 1 4 4287400 4287400 0 2665 2268 2760 6645;6646;6647;6648 4785 4785 1 110420 0 DNLFEIVTTSR VHKVQECKQSDIMMRDNLFEIVTTSRTFYV IMMRDNLFEIVTTSRTFYVQADSPEEMHSW R D N S R T 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 1 2 0 0 1 0 0 11 0 1293.6565 Q9HB21 Q9HB21 255 265 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 2 0.00023566 169.21 By MS/MS 7 0 1 1 271730 271730 0 2666 2548 2761 6649 4786 4786 1 4855.8 0 DNLPLQENVTIQK AINPELLQLLPLHPKDNLPLQENVTIQKQK PKDNLPLQENVTIQKQKRRSVNSKIPAPKE K D N Q K Q 0 0 2 1 0 2 1 0 0 1 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1510.7991 Q99661 Q99661 78 90 KIF2C Kinesin-like protein KIF2C yes yes 2 0.00094649 132.03 By MS/MS 4.5 0.5 1 1 2 819090 819090 0 2667 2282 2762 6650;6651 4787 4787 1 32152 0 DNNELLLFILK RSMRKTFARYLSFRRDNNELLLFILKQLVA SFRRDNNELLLFILKQLVAEQVTYQRNRFG R D N L K Q 0 0 2 1 0 0 1 0 0 1 4 1 0 1 0 0 0 0 0 0 0 0 11 0 1330.7497 P49736 P49736 827 837 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00038791 147.3 By MS/MS 5.6 1.85 1 1 1 1 1 5 1059300 1059300 0 2668 928 2763 6652;6653;6654;6655;6656 4788;4789 4789 2 29634 0 DNNLLGK GVLIQVYEGERAMTKDNNLLGKFELTGIPP EGERAMTKDNNLLGKFELTGIPPAPRGVPQ K D N G K F 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 772.40792 P11142;P54652 P11142 452 458 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.027181 116.9 By MS/MS 5 0 1 1 3589000 3589000 0 2669 546 2764 6657 4790 4790 1 147520 0 DNNLLGR GVLIQVYEGERAMTKDNNLLGRFELSGIPP EGERAMTKDNNLLGRFELSGIPPAPRGVPQ K D N G R F 0 1 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 800.41407 P0DMV9;P0DMV8;P17066 P0DMV9 452 458 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2 0.020411 125.25 By MS/MS 5.5 0.5 1 1 2 4211900 4211900 0 2670 528;611 2765 6658;6659 4791 4791 1 148380 0 DNNQFASASLDR EGHTHYVMQIVINPKDNNQFASASLDRTIK NPKDNNQFASASLDRTIKVWQLGSSSPNFT K D N D R T 2 1 2 2 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1336.6008 P35606 P35606 154 165 COPB2 Coatomer subunit beta yes yes 2 1.0491E-24 250.26 By MS/MS 2.5 1.12 1 1 1 1 4 5484000 5484000 0 2671 795 2766 6660;6661;6662;6663 4792;4793;4794;4795 4792 4 222610 0 DNPGVVTCLDEAR NGEQPLSAMVSMVTKDNPGVVTCLDEARHG TKDNPGVVTCLDEARHGFESGDFVSFSEVQ K D N A R H 1 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1444.6616 P22314 P22314 227 239 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 6.3373E-27 251.75 By MS/MS 4 0 1 1 1619800 1619800 0 2672 658 2767 6664 4796 4796 1 44220 0 DNPLDPVLAK VSFAQLKNLKWLDLKDNPLDPVLAKVAGDC WLDLKDNPLDPVLAKVAGDCLDEKQCKQCA K D N A K V 1 0 1 2 0 0 0 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 10 0 1080.5815 Q96AG4 Q96AG4 117 126 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.0015555 118.71 By MS/MS 8 0 1 1 895210 895210 0 2673 2121 2768 6665 4797 4797 1 59057 0 DNPLNEGTDAAR GFCYLANQWQVSKPKDNPLNEGTDAARAAI KPKDNPLNEGTDAARAAIAFSFFSIFTWAG K D N A R A 2 1 2 2 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 12 0 1271.5742 O43759 O43759 137 148 SYNGR1 Synaptogyrin-1 yes yes 2 3.7584E-07 184.44 By MS/MS 9 0 1 1 398120 398120 0 2674 220 2769 6666 4798 4798 1 228480 0 DNPNLLFNMCGFECR TTVQWENSFVSVYSKDNPNLLFNMCGFECR DNPNLLFNMCGFECRILPKCRTSYEEFTHK K D N C R I 0 1 3 1 2 0 1 1 0 0 2 0 1 2 1 0 0 0 0 0 0 0 15 0 1885.791 Q6P2Q9 Q6P2Q9 1181 1195 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 6.566E-06 148.68 By MS/MS 2 0.816 1 1 1 3 486190 486190 0 2675 1706 2770 6667;6668;6669 4799 4799 1221 1 20344 0 DNPTAQQIMQLLR SVEPAQGEAREGSPRDNPTAQQIMQLLREM PRDNPTAQQIMQLLREMQNPRERPGLGSNP R D N L R E 1 1 1 1 0 3 0 0 0 1 2 0 1 0 1 0 1 0 0 0 0 0 13 0 1526.7875 Q08379 Q08379 956 968 GOLGA2 Golgin subfamily A member 2 yes yes 2 9.6141E-05 152.67 By MS/MS 3 0 1 1 187190 187190 0 2676 1288 2771 6670 4800 4800 1038 1 4886.5 0 DNSDFDLLTVSETANEPPQDEGNSFNSPR IVVQRVGSKLFFDKRDNSDFDLLTVSETAN NEPPQDEGNSFNSPRNLAMEATYINHNFSQ R D N P R N 1 1 4 4 0 1 3 1 0 0 2 0 0 2 3 4 2 0 0 1 0 0 29 0 3194.3912 O15371 O15371 282 310 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 1.6003E-05 77.802 By MS/MS 5.67 0.471 1 2 3 12286000 12286000 0 2677 172 2772 6671;6672;6673 4801;4802 4801 2 101620 0 DNSEVQFNSAVPTNLSR LKEVTLLGQNVNSFRDNSEVQFNSAVPTNL SEVQFNSAVPTNLSRGFTTNYKTKQGGLRF R D N S R G 1 1 3 1 0 1 1 0 0 0 1 0 0 1 1 3 1 0 0 2 0 0 17 0 1876.8915 Q96SZ6 Q96SZ6 323 339 CDK5RAP1 CDK5 regulatory subunit-associated protein 1 yes yes 2 0.005122 133.88 By MS/MS 7 0.816 1 1 1 3 5341200 5341200 0 2678 2258 2773 6674;6675;6676 4803 4803 1 58313 0 DNSHPFVGLAFK DDSKEKTKILMNSSRDNSHPFVGLAFKLEV SSRDNSHPFVGLAFKLEVGRFGQLTYVRSY R D N F K L 1 0 1 1 0 0 0 1 1 0 1 1 0 2 1 1 0 0 0 1 0 0 12 0 1330.667 Q96RP9 Q96RP9 348 359 GFM1 Elongation factor G, mitochondrial yes yes 2;3 0.00099929 129.82 By MS/MS 5.4 1.02 1 2 1 1 5 6068400 6068400 0 2679 2247 2774 6677;6678;6679;6680;6681 4804;4805 4805 2 195490 0 DNSNIILLGDSQGDLR HDGALRNTEYFNQLKDNSNIILLGDSQGDL NSNIILLGDSQGDLRMADGVANVEHILKIG K D N L R M 0 1 2 3 0 1 0 2 0 2 3 0 0 0 0 2 0 0 0 0 0 0 16 0 1728.8642 Q9H0P0 Q9H0P0 268 283 NT5C3A Cytosolic 5-nucleotidase 3A yes yes 2 1.3023E-38 259.27 By MS/MS 7.5 0.5 1 1 2 2642900 2642900 0 2680 2455 2775 6682;6683 4806;4807 4806 2 59776 0 DNSTMGYMAAK WTANMERIMKAQALRDNSTMGYMAAKKHLE QALRDNSTMGYMAAKKHLEINPDHSIIETL R D N A K K 2 0 1 1 0 0 0 1 0 0 0 1 2 0 0 1 1 0 1 0 0 0 11 0 1187.4951 P07900 P07900 621 631 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 9.0828E-11 204.34 By MS/MS 4 0 2 2 1318300 1318300 0 2681 494 2776;2777 6684;6685 4808;4809 4809 291;292 2 35987 0 DNTSVYHISGK VIPNSNFYVSRTACRDNTSVYHISGKKKTF TACRDNTSVYHISGKKKTFKDVGNLLRSHG R D N G K K 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 2 1 0 1 1 0 0 11 0 1219.5833 Q9NTJ3 Q9NTJ3 192 202 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.026998 83.045 By MS/MS 3.5 0.5 1 1 2 1196400 1196400 0 2682 2630 2778 6686;6687 4810 4810 1 31389 0 DNVDDPTGNFR WTKIEPSVNFLKSPKDNVDDPTGNFRSGPL KSPKDNVDDPTGNFRSGPLTGWRVFLLLLC K D N F R S 0 1 2 3 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 11 0 1248.5371 Q12907 Q12907 304 314 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 2 0.0014584 127.51 By MS/MS 7.5 0.5 1 1 2 2220400 2220400 0 2683 1315 2779 6688;6689 4811 4811 1 70230 0 DNVDLLGSLADLYFR AISTICSLEKKSLLRDNVDLLGSLADLYFR DNVDLLGSLADLYFRAGDNKNSVLKFEQAQ R D N F R A 1 1 1 3 0 0 0 1 0 0 4 0 0 1 0 1 0 0 1 1 0 0 15 0 1709.8625 Q9UJX3 Q9UJX3 269 283 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2 3.4562E-14 198.52 By MS/MS 6 0 1 1 163220 163220 0 2684 2803 2780 6690 4812 4812 1 1272.8 0 DNWNRPICSVPGAR DFENFYTRNLYMRIRDNWNRPICSVPGARV RDNWNRPICSVPGARVDIMERQSHDYNWSF R D N A R V 1 2 2 1 1 0 0 1 0 1 0 0 0 0 2 1 0 1 0 1 0 0 14 1 1640.7842 O15270 O15270 132 145 SPTLC2 Serine palmitoyltransferase 2 yes yes 3 0.0089668 81.904 By MS/MS 6 0 1 1 5588400 5588400 0 2685 166 2781 6691 4813 4813 1 43579 0 DNYPQSVPR LQQKAVASEIFKGKKDNYPQSVPRLFISTR IFKGKKDNYPQSVPRLFISTRLGTDEISPR K D N P R L 0 1 1 1 0 1 0 0 0 0 0 0 0 0 2 1 0 0 1 1 0 0 9 0 1074.5094 O00159 O00159 886 894 MYO1C Unconventional myosin-Ic yes yes 2 0.0027502 121.73 By MS/MS 4 0 1 1 2419300 2419300 0 2686 72 2782 6692 4814 4814 1 66045 0 DNYSPGWK RRLLSVNIRVRADLRDNYSPGWKFNHWELK RVRADLRDNYSPGWKFNHWELKGVPIRLEV R D N W K F 0 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 1 1 0 0 0 8 0 965.4243 P07814 P07814 1347 1354 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.017402 110.12 By MS/MS 3 0 1 1 1506400 1506400 0 2687 493 2783 6693 4815 4815 1 39323 0 DPAAAPATGNK RTTISRAKPVWYAGRDPAAAPATGNKKTHL YAGRDPAAAPATGNKKTHLTELQRLLDTAF R D P N K K 4 0 1 1 0 0 0 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 11 0 1011.4985 Q02218 Q02218 989 999 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.0084189 99.788 By MS/MS By matching 4 0 2 1 1 247720 236190 11538 2688 1251 2784 6694;6695 4816 4816 1 6447.6 24111 DPASGICTLLYDSAPSGR QEQKTLGADDTMLAKDPASGICTLLYDSAP SGICTLLYDSAPSGRFGTMTYLSKAAATYV K D P G R F 2 1 0 2 1 0 0 2 0 1 2 0 0 0 2 3 1 0 1 0 0 0 18 0 1878.8782 P46020 P46020 1179 1196 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 2 4.7153E-05 136.3 By MS/MS 3 0 1 1 110740 110740 0 2689 875 2785 6696 4817 4817 1 2890.8 0 DPATYNIATLK VKRVLALTETCLVERDPATYNIATLKPLGE LVERDPATYNIATLKPLGEVFALVCDSENP R D P L K P 2 0 1 1 0 0 0 0 0 1 1 1 0 0 1 0 2 0 1 0 0 0 11 0 1205.6292 O75165 O75165 266 276 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 3 0.012477 88.056 By MS/MS 7 0 1 1 483650 483650 0 2690 287 2786 6697 4818 4818 1 8642.9 0 DPELGLK TPVIVGSALCALEGRDPELGLKSVQKLLDA ALCALEGRDPELGLKSVQKLLDAVDTYIPV R D P L K S 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 7 0 770.41742 P49411 P49411 228 234 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.012549 146.94 By MS/MS 8 0.816 1 1 1 3 19763000 19763000 0 2691 918 2787 6698;6699;6700 4819;4820 4820 2 455090 0 DPENFPFVVLGNK LDSWRDEFLIQASPRDPENFPFVVLGNKID PRDPENFPFVVLGNKIDLENRQVATKRAQA R D P N K I 0 0 2 1 0 0 1 1 0 0 1 1 0 2 2 0 0 0 0 2 0 0 13 0 1474.7456 P51149 P51149 114 126 RAB7A Ras-related protein Rab-7a yes yes 2 0.00093487 132.17 By MS/MS 9 0 1 1 402090 402090 0 2692 960 2788 6701 4821;4822 4822 2 230760 0 DPESETDNDSQEIFK EQMYNILMWIHDNYRDPESETDNDSQEIFK DPESETDNDSQEIFKLAKDVLIQGLIDENP R D P F K L 0 0 1 3 0 1 3 0 0 1 0 1 0 1 1 2 1 0 0 0 0 0 15 0 1752.7326 P78527 P78527 2486 2500 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.5139E-38 264.61 By MS/MS 1.5 0.5 1 1 2 707570 707570 0 2693 1197 2789 6702;6703 4823;4824 4824 2 34845 0 DPETLVGYSMVGCQR WVGVSGSETSEALSRDPETLVGYSMVGCQR DPETLVGYSMVGCQRAMMANRLSFFFDFRG R D P Q R A 0 1 0 1 1 1 1 2 0 0 1 0 1 0 1 1 1 0 1 2 0 0 15 0 1710.7705 P49327 P49327 123 137 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 2.4485E-29 250.26 By MS/MS 2.69 1.26 3 3 3 3 1 13 9032100 9032100 0 2694 915 2790;2791 6704;6705;6706;6707;6708;6709;6710;6711;6712;6713;6714;6715;6716 4825;4826;4827;4828;4829;4830 4830 654 6 372900 0 DPFAHLPK MDECEQALAAEPKAKDPFAHLPKSTFVLDE AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE K D P P K S 1 0 0 1 0 0 0 0 1 0 1 1 0 1 2 0 0 0 0 0 0 0 8 0 923.4865 P26641 P26641 278 285 EEF1G Elongation factor 1-gamma yes yes 2 0.0058824 133.81 By MS/MS 6.8 0.748 2 2 1 5 7666900 7666900 0 2695 700 2792 6717;6718;6719;6720;6721 4831;4832;4833 4832 3 114300 0 DPFSSSLQNR RCLHPLLVVVSCLTRDPFSSSLQNRAEVDK SCLTRDPFSSSLQNRAEVDKVKALLSHDSG R D P N R A 0 1 1 1 0 1 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 10 0 1149.5415 Q7L2E3 Q7L2E3 909 918 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 9.1883E-06 175.91 By MS/MS 4 0.816 1 1 1 3 1988300 1988300 0 2696 1763 2793 6722;6723;6724 4834;4835;4836 4835 3 60336 0 DPIYFTGLASEPGAR STDEGQCWQTYTFTRDPIYFTGLASEPGAR DPIYFTGLASEPGARSMNISIWGFTESFLT R D P A R S 2 1 0 1 0 0 1 2 0 1 1 0 0 1 2 1 1 0 1 0 0 0 15 0 1592.7835 Q99523 Q99523 565 579 SORT1 Sortilin yes yes 2 6.5999E-15 211.37 By MS/MS 4.5 0.5 1 1 2 1051300 1051300 0 2697 2271 2794 6725;6726 4837 4837 1 30876 0 DPLLLAIIPK QMTWGALFRHEILSRDPLLLAIIPKYLRAS EILSRDPLLLAIIPKYLRASMTNLVKMGFP R D P P K Y 1 0 0 1 0 0 0 0 0 2 3 1 0 0 2 0 0 0 0 0 0 0 10 0 1091.6954 Q9HAV4 Q9HAV4 387 396 XPO5 Exportin-5 yes yes 2 0.019886 92.439 By MS/MS 5 1.41 1 1 1 1 1 5 2142300 2142300 0 2698 2546 2795 6727;6728;6729;6730;6731 4838;4839;4840;4841;4842;4843 4838 6 54735 0 DPLSASSR NALKSMIMFGSQENKDPLSASSRIGHLLPE FGSQENKDPLSASSRIGHLLPEEQVYLNQQ K D P S R I 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 8 0 831.40865 O95071 O95071 1352 1359 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.055211 89.296 By MS/MS 2 0 1 1 231830 231830 0 2699 364 2796 6732 4844 4844 1 11523 0 DPNLFPFEK LQLESPKLHAEAIKRDPNLFPFEKEGPHYT AEAIKRDPNLFPFEKEGPHYTPPIPNYQPP R D P E K E 0 0 1 1 0 0 1 0 0 0 1 1 0 2 2 0 0 0 0 0 0 0 9 0 1105.5444 Q9NQ50 Q9NQ50 165 173 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 2 0.0069542 111.46 By MS/MS 9 0 1 1 297680 297680 0 2700 2585 2797 6733 4845 4845 1 170840 0 DPNNLFMVR RLAAMLRQLAQYHAKDPNNLFMVRLAQGLT AQYHAKDPNNLFMVRLAQGLTHLGKGTLTL K D P V R L 0 1 2 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 9 0 1104.5386 Q13200 Q13200 755 763 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 1.0554E-06 190.26 By MS/MS 4.33 0.471 2 1 3 3825100 3825100 0 2701 1347 2798;2799 6734;6735;6736 4846;4847 4846 1052 2 105920 0 DPNNLLNDWSQK KVDRLAGIINFQRPKDPNNLLNDWSQKLNS RPKDPNNLLNDWSQKLNSLMSLVNKTTHLI K D P Q K L 0 0 3 2 0 1 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 12 0 1442.679 O00232 O00232 420 431 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 1.6466E-16 220.29 By MS/MS 6 0 1 1 5485600 5485600 0 2702 81 2800 6737 4848 4848 1 42777 0 DPNTQSVGNPQR FHSHPGTHCPSPAVKDPNTQSVGNPQRIGW AVKDPNTQSVGNPQRIGWPHFKEIFMLSAL K D P Q R I 0 1 2 1 0 2 0 1 0 0 0 0 0 0 2 1 1 0 0 1 0 0 12 0 1311.6167 O75616 O75616 285 296 ERAL1 GTPase Era, mitochondrial yes yes 2 1.0165E-23 234.9 By MS/MS 8 0.816 1 1 1 3 7530400 7530400 0 2703 321 2801 6738;6739;6740 4849 4849 1 162690 0 DPPDPYVSLLLLPDK VSIVHGCRSLRQNGRDPPDPYVSLLLLPDK DPPDPYVSLLLLPDKNRGTKRRTSQKKRTL R D P D K N 0 0 0 3 0 0 0 0 0 0 4 1 0 0 4 1 0 0 1 1 0 0 15 0 1680.8974 Q9BSJ8 Q9BSJ8 1004 1018 ESYT1 Extended synaptotagmin-1 yes yes 2 0.0065127 116.03 By MS/MS 4 0.816 1 1 1 3 387520 387520 0 2704 2339 2802 6741;6742;6743 4850;4851;4852;4853 4852 4 10957 0 DPQLVPILIEAAR FLTTAIRPHGIFGPRDPQLVPILIEAARNG PRDPQLVPILIEAARNGKMKFVIGNGKNLV R D P A R N 2 1 0 1 0 1 1 0 0 2 2 0 0 0 2 0 0 0 0 1 0 0 13 0 1433.8242 Q15738 Q15738 208 220 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2;3 0.017185 93.623 By MS/MS 7.3 1.79 1 1 1 2 2 2 1 10 33426000 33426000 0 2705 1515 2803 6744;6745;6746;6747;6748;6749;6750;6751;6752;6753 4854;4855;4856 4856 3 897190 0 DPSGLLISVIR EAAGGKYRSTVSKSKDPSGLLISVIRTLST SKSKDPSGLLISVIRTLSTSDDVEDRENEK K D P I R T 0 1 0 1 0 0 0 1 0 2 2 0 0 0 1 2 0 0 0 1 0 0 11 0 1168.6816 Q96A65 Q96A65 19 29 EXOC4 Exocyst complex component 4 yes yes 2 0.00058273 139.38 By MS/MS By matching 3.5 0.5 1 1 1 1 258210 227650 30558 2706 2118 2804 6754;6755 4857;4858 4858 2 6214.5 43796 DPSKNQGGGLSSSGAGEGQGPK EKQNKPQKQNDGQRKDPSKNQGGGLSSSGA GGLSSSGAGEGQGPKKQTRLGLEAKKEENL K D P P K K 1 0 1 1 0 2 1 7 0 0 1 2 0 0 2 4 0 0 0 0 0 0 22 1 2013.9352 P07814 P07814 988 1009 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.0045314 60.347 By MS/MS 3 0 1 1 450030 450030 0 2707 493 2805 6756 4859 4859 1 11748 0 DPSQIDNNEPYMK KQMGYQCFVSFFDLRDPSQIDNNEPYMKIP LRDPSQIDNNEPYMKIPCNDSKITSAVWGP R D P M K I 0 0 2 2 0 1 1 0 0 1 0 1 1 0 2 1 0 0 1 0 0 0 13 0 1549.6719 Q13347 Q13347 129 141 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.0025267 136.81 By MS/MS 7.5 0.5 1 1 2 1424900 1424900 0 2708 1358 2806 6757;6758 4860 4860 1 54418 0 DPSQQELPR LKMVVPGLDGAQIPRDPSQQELPRLLSAAC GAQIPRDPSQQELPRLLSAACRLQLNGNLQ R D P P R L 0 1 0 1 0 2 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 9 0 1068.52 P49327 P49327 1172 1180 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.6988E-11 219.54 By MS/MS 2.4 1.02 1 2 1 1 5 30510000 30510000 0 2709 915 2807 6759;6760;6761;6762;6763 4861;4862;4863;4864;4865 4862 5 1265200 0 DPSSVPNADNAFTLFYVK TVNTLQTLTSQLLKRDPSSVPNADNAFTLF SVPNADNAFTLFYVKFRAAAPKVRTLIEQI R D P V K F 2 0 2 2 0 0 0 0 0 0 1 1 0 2 2 2 1 0 1 2 0 0 18 0 1983.9578 Q96JB2 Q96JB2 282 299 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 0.0088041 98.582 By MS/MS 4.5 0.5 1 1 2 311610 311610 0 2710 2205 2808 6764;6765 4866 4866 1 9127.5 0 DPTSLEEEIK NHQLYKPYTNGIIAKDPTSLEEEIKEIRRS GIIAKDPTSLEEEIKEIRRSGSSKALDNTP K D P I K E 0 0 0 1 0 0 3 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 10 0 1159.5608 Q86UL3 Q86UL3 84 93 AGPAT6 Glycerol-3-phosphate acyltransferase 4 yes yes 2 0.00067206 138.06 By MS/MS 2 0.816 1 1 1 3 488720 488720 0 2711 1822 2809 6766;6767;6768 4867 4867 1 21607 0 DPVQLNLLYVQAR LRRKFFYSDQNVDSRDPVQLNLLYVQARDD SRDPVQLNLLYVQARDDILNGSHPVSFDKA R D P A R D 1 1 1 1 0 2 0 0 0 0 3 0 0 0 1 0 0 0 1 2 0 0 13 0 1527.8409 Q9Y490;Q9Y4G6 Q9Y490 208 220 TLN1;TLN2 Talin-1;Talin-2 yes no 2 6.3112E-12 206.97 By MS/MS 3 0.816 1 1 1 3 718250 718250 0 2712 2947 2810 6769;6770;6771 4868;4869 4868 2 28135 0 DQAAEGINLIK YHVLHPDGQSAQGAKDQAAEGINLIKVFAK QGAKDQAAEGINLIKVFAKTEAQKGAYIEL K D Q I K V 2 0 1 1 0 1 1 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 11 0 1170.6245 P82650 P82650 319 329 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 1.122E-07 219.5 By MS/MS By MS/MS 7 0 2 1 1 18464000 18405000 59496 2713 1201 2811 6772;6773 4870;4871;4872 4871 3 328900 244240 DQDELNPYAAWR PDKVLRMLYVWALCRDQDELNPYAAWRLLD LCRDQDELNPYAAWRLLDISASSTEQIL__ R D Q W R L 2 1 1 2 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 12 0 1476.6634 O43615 O43615 428 439 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 5.875E-17 257.72 By MS/MS 7 0.816 1 1 1 3 12352000 12352000 0 2714 209 2812 6774;6775;6776 4873 4873 1 221640 0 DQDLEPGAPSMGAK GEIDCEDWIKKTTARDQDLEPGAPSMGAKS RDQDLEPGAPSMGAKSLCIPFKPLCELQPG R D Q A K S 2 0 0 2 0 1 1 2 0 0 1 1 1 0 2 1 0 0 0 0 0 0 14 0 1414.6398 P07814 P07814 1464 1477 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 2.5254E-06 173.76 By MS/MS By matching 3.4 0.49 3 2 4 1 4645800 4612900 32925 2715 493 2813;2814 6777;6778;6779;6780;6781 4874;4875 4874 286 2 121120 47189 DQEALEAVKR NKQAEVKKMDSGYRKDQEALEAVKRLKEKL SGYRKDQEALEAVKRLKEKLEAEMKKLNYE K D Q K R L 2 1 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1157.6041 O95347 O95347 447 456 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0030344 132.88 By MS/MS 3.5 0.5 1 1 2 1367300 1367300 0 2716 385 2815 6782;6783 4876 4876 1 35858 0 DQEGQDVLLFIDNIFR ARVALTGLTVAEYFRDQEGQDVLLFIDNIF QEGQDVLLFIDNIFRFTQAGSEVSALLGRI R D Q F R F 0 1 1 3 0 2 1 1 0 2 2 0 0 2 0 0 0 0 0 1 0 0 16 0 1920.9581 P06576 P06576 295 310 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.012013 113.95 By MS/MS 6 0 1 1 52713 52713 0 2717 478 2816 6784 4877 4877 1 411.06 0 DQGAYLILR IMLLTATAPGRQQVRDQGAYLILRELHSWE GRQQVRDQGAYLILRELHSWEPEPDVRTAC R D Q L R E 1 1 0 1 0 1 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 0 9 0 1047.5713 Q9BTY7 Q9BTY7 308 316 HGH1 Protein HGH1 homolog yes yes 2 0.002563 138.4 By MS/MS 6.5 0.5 1 1 2 1732700 1732700 0 2718 2357 2817 6785;6786 4878 4878 1 16861 0 DQGTYEDYVEGLR FEHFLPMLQTVAKNKDQGTYEDYVEGLRVF NKDQGTYEDYVEGLRVFDKEGNGTVMGAEI K D Q L R V 0 1 0 2 0 1 2 2 0 0 1 0 0 0 0 0 1 0 2 1 0 0 13 0 1543.6791 P60660 P60660 82 94 MYL6 Myosin light polypeptide 6 yes yes 2 1.5006E-17 218.62 By MS/MS 10 0 1 1 339010 339010 0 2719 1071 2818 6787 4879 4879 1 360330 0 DQHSFELDEK ESSKPGPVQVVLVQKDQHSFELDEKALASI VLVQKDQHSFELDEKALASILLQDHIRDLD K D Q E K A 0 0 0 2 0 1 2 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1246.5466 Q6DD88 Q6DD88 35 44 ATL3 Atlastin-3 yes yes 2 0.046493 111.86 By MS/MS 6 0 1 1 3117000 3117000 0 2720 1677 2819 6788 4880 4880 0 24306 0 DQILYLFGR KKPPRPQEGTRSSQRDQILYLFGRTGREKE TRSSQRDQILYLFGRTGREKEEWFRRFILA R D Q G R T 0 1 0 1 0 1 0 1 0 1 2 0 0 1 0 0 0 0 1 0 0 0 9 0 1123.6026 Q8IWB9 Q8IWB9 684 692 TEX2 Testis-expressed sequence 2 protein yes yes 2 0.002198 127.68 By MS/MS 3 0 1 1 67676 67676 0 2721 1863 2820 6789 4881 4881 1 1766.7 0 DQITAGNAAR YELLDSPGKVLLQSKDQITAGNAARKNHLE LLQSKDQITAGNAARKNHLEGKAAISNKIT K D Q A R K 3 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1015.5047 P22234 P22234 37 46 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.00074015 164.66 By MS/MS 8.5 1.5 1 1 2 230680 230680 0 2722 656 2821 6790;6791 4882;4883 4882 2 245190 0 DQIVDLTVGNNK QKNYSPYYNTIDDLKDQIVDLTVGNNKTLL DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF K D Q N K T 0 0 2 2 0 1 0 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1314.6779 P35527;CON__P35527 P35527 213 224 KRT9 Keratin, type I cytoskeletal 9 yes no 2 1.7723E-07 215.04 By MS/MS 4 2 1 1 1 1 1 1 1 7 684050 0 684050 + 2723 791 2822 6792;6793;6794;6795;6796;6797;6798 4884;4885;4886;4887;4888;4889;4890;4891;4892 4890 9 0 1479000 DQIYDIFQK FVLDEADEMLSRGFKDQIYDIFQKLNSNTQ LSRGFKDQIYDIFQKLNSNTQVVLLSATMP K D Q Q K L 0 0 0 2 0 2 0 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 9 0 1168.5764 P60842 P60842 194 202 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 5.3568E-24 268.72 By MS/MS 4.55 2.39 2 1 1 1 1 2 2 1 11 83191000 83191000 0 2724 1074 2823 6799;6800;6801;6802;6803;6804;6805;6806;6807;6808;6809 4893;4894;4895;4896;4897;4898;4899;4900;4901;4902 4900 10 1149100 0 DQLALAIGK LSGLPAGPDREGSLKDQLALAIGKLGENMI REGSLKDQLALAIGKLGENMILKRAAWVKV K D Q G K L 2 0 0 1 0 1 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 927.53893 P43897 P43897 184 192 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.00154 134.77 By MS/MS 6.5 1.12 1 1 1 1 4 8832800 8832800 0 2725 868 2824 6810;6811;6812;6813 4903 4903 1 282080 0 DQLFSQPPVLR APSSMTQDLPGVPGKDQLFSQPPVLRTASQ VPGKDQLFSQPPVLRTASQEGCQELTQEQR K D Q L R T 0 1 0 1 0 2 0 0 0 0 2 0 0 1 2 1 0 0 0 1 0 0 11 0 1298.6983 O43933 O43933 1168 1178 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.013335 95.358 By MS/MS 5 0 1 1 33936000 33936000 0 2726 235 2825 6814 4904 4904 1 1394900 0 DQLIYNLLKEEQTPQNK ______________________________ LIYNLLKEEQTPQNKITVVGVGAVGMACAI K D Q N K I 0 0 2 1 0 3 2 0 0 1 3 2 0 0 1 0 1 0 1 0 0 0 17 1 2073.0742 P00338 P00338 6 22 LDHA L-lactate dehydrogenase A chain yes yes 3 0.016197 106.82 By MS/MS 8 0 1 1 767120 767120 0 2727 424 2826 6815 4905 4905 1 50606 0 DQLLLGPTYATPK KAYLRDFMYVSQDPKDQLLLGPTYATPKVL PKDQLLLGPTYATPKVLEKAGLTMNDIDAF K D Q P K V 1 0 0 1 0 1 0 1 0 0 3 1 0 0 2 0 2 0 1 0 0 0 13 0 1415.766 P55084 P55084 349 361 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 1.3066E-08 194.48 By MS/MS By MS/MS 6.5 0.5 2 2 2 2 24875000 24802000 72100 2728 1027 2827 6816;6817;6818;6819 4906;4907;4908;4909 4909 4 316400 268730 DQLNDQYLELLEK RMKMEKKKQENKMRRDQLNDQYLELLEKQR RRDQLNDQYLELLEKQRLYFKTVKEFKEEG R D Q E K Q 0 0 1 2 0 2 2 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 13 0 1619.8043 Q567U6 Q567U6 589 601 CCDC93 Coiled-coil domain-containing protein 93 yes yes 2 0.00020413 148.89 By MS/MS 5 0 1 1 362260 362260 0 2729 1594 2828 6820 4910 4910 1 14891 0 DQLQTFSEEHPVLLTEAPLNPR DWNDMERIWQYVYSKDQLQTFSEEHPVLLT EEHPVLLTEAPLNPRKNRERAAEVFFETFN K D Q P R K 1 1 1 1 0 2 3 0 1 0 4 0 0 1 3 1 2 0 0 1 0 0 22 0 2533.2813 P61163 P61163 97 118 ACTR1A Alpha-centractin yes yes 3 5.1702E-05 100.28 By MS/MS 7 0 1 1 1754400 1754400 0 2730 1090 2829 6821 4911 4911 1 31352 0 DQNILLGTTYR NNVSSYLSKNILAFRDQNILLGTTYRIIAN LAFRDQNILLGTTYRIIANALSSEPACLAE R D Q Y R I 0 1 1 1 0 1 0 1 0 1 2 0 0 0 0 0 2 0 1 0 0 0 11 0 1292.6725 P78527 P78527 3325 3335 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.3548E-22 238.51 By MS/MS 2.5 1.12 1 1 1 1 4 6723300 6723300 0 2731 1197 2830 6822;6823;6824;6825 4912;4913;4914 4912 3 249540 0 DQNRAPSLTLR YDSYAMYLCEWCRTRDQNRAPSLTLRNFLS CRTRDQNRAPSLTLRNFLSRNRLMITHHAV R D Q L R N 1 2 1 1 0 1 0 0 0 0 2 0 0 0 1 1 1 0 0 0 0 0 11 1 1269.6789 Q8TBR7 Q8TBR7 101 111 FAM57A Protein FAM57A yes yes 3 0.0089579 73.273 By MS/MS 1 0 1 1 199600 199600 0 2732 1990 2831 6826 4915 4915 1 9752.2 0 DQPSLVQAIFNGDPDEVR ______________________________ SLVQAIFNGDPDEVRALIFKKEDVNFQDNE R D Q V R A 1 1 1 3 0 2 1 1 0 1 1 0 0 1 2 1 0 0 0 2 0 0 18 0 1998.9647 O15084 O15084 8 25 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.00072741 118.19 By MS/MS 4 0 1 1 110330 110330 0 2733 147 2832 6827 4916 4916 1 3011.9 0 DQPYYDIPDAPYR ILQTLSLSLSADIHKDQPYYDIPDAPYRIT HKDQPYYDIPDAPYRITVPDTYEARESIVK K D Q Y R I 1 1 0 3 0 1 0 0 0 1 0 0 0 0 3 0 0 0 3 0 0 0 13 0 1611.7205 P42356 P42356 1028 1040 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.030443 78.903 By MS/MS 2.5 0.5 1 1 2 825230 825230 0 2734 850 2833 6828;6829 4917;4918;4919 4919 3 29127 0 DQQPGTFLLR IMGFISKERERALLKDQQPGTFLLRFSESS RALLKDQQPGTFLLRFSESSREGAITFTWV K D Q L R F 0 1 0 1 0 2 0 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 10 0 1173.6142 P42224 P42224 593 602 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 0.0041292 147.75 By MS/MS 5 0 1 1 0 0 0 2735 847 2834 6830 4920 4920 1 0 0 DQSAVVVQGLPEGVAFK GKSTVVPVPYEKMLRDQSAVVVQGLPEGVA SAVVVQGLPEGVAFKHPENYDLATLKWILE R D Q F K H 2 0 0 1 0 2 1 2 0 0 1 1 0 1 1 1 0 0 0 4 0 0 17 0 1742.9203 P78347 P78347 144 160 GTF2I General transcription factor II-I yes yes 2 1.0194E-13 184 By MS/MS 3.5 0.5 1 1 2 4337800 4337800 0 2736 1194 2835 6831;6832 4921 4921 1 113510 0 DQSDFVGQTVELGELR DFLAGPGSLGGASGRDQSDFVGQTVELGEL QSDFVGQTVELGELRLRVRRVLAEGGFAFV R D Q L R L 0 1 0 2 0 2 2 2 0 0 2 0 0 1 0 1 1 0 0 2 0 0 16 0 1791.8639 O14976 O14976 24 39 GAK Cyclin-G-associated kinase yes yes 2 1.2099E-10 231.58 By MS/MS 3 0 1 1 402090 402090 0 2737 140 2836 6833 4922 4922 1 10497 0 DQSEPLGR LSFALADGSHKNMQRDQSEPLGRVLSRIAT SHKNMQRDQSEPLGRVLSRIATNALKGHAK R D Q G R V 0 1 0 1 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 8 0 900.43011 Q6L8Q7 Q6L8Q7 66 73 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.031882 98.458 By MS/MS 5.5 0.5 1 1 2 1422500 1422500 0 2738 1687 2837 6834;6835 4923 4923 1 35152 0 DQSGVQELVK ILVSLLADCNDHQMRDQSGVQELVKQVLST DHQMRDQSGVQELVKQVLSTLRAIAGNDDV R D Q V K Q 0 0 0 1 0 2 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 10 0 1101.5666 Q6NXE6 Q6NXE6 336 345 ARMC6 Armadillo repeat-containing protein 6 yes yes 2 8.0408E-06 178.84 By MS/MS 7 0 1 1 0 0 0 2739 1694 2838 6836 4924 4924 1 0 0 DQTDDQVTIDSALATQK VDIQLKYFDLGLPNRDQTDDQVTIDSALAT TDDQVTIDSALATQKYSVAVKCATITPDEA R D Q Q K Y 2 0 0 4 0 3 0 0 0 1 1 1 0 0 0 1 3 0 0 1 0 0 17 0 1847.8749 P48735 P48735 90 106 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 1.8608E-68 291.13 By MS/MS 7 0 1 1 2096700 2096700 0 2740 912 2839 6837 4925 4925 1 37469 0 DQTIVDPFSSK MYIKQVIIQGFRSYRDQTIVDPFSSKHNVI RSYRDQTIVDPFSSKHNVIVGRNGSGKSNF R D Q S K H 0 0 0 2 0 1 0 0 0 1 0 1 0 1 1 2 1 0 0 1 0 0 11 0 1235.6034 Q9UQE7 Q9UQE7 16 26 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0021394 127.42 By MS/MS 3 0 1 1 0 0 0 2741 2860 2840 6838 4926 4926 1 0 0 DQTPDENDQVIVK NELQNLTAAEVVVPRDQTPDENDQVIVKII PRDQTPDENDQVIVKIIGHFYASQMAQRKI R D Q V K I 0 0 1 3 0 2 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 13 0 1499.7104 Q9NZI8 Q9NZI8 526 538 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 1.3067E-07 184.44 By MS/MS 5.5 0.5 1 1 2 7903400 7903400 0 2742 2711 2841 6839;6840 4927 4927 1 285760 0 DQTPDENDQVVVK NELQNLSSAEVVVPRDQTPDENDQVVVKIT PRDQTPDENDQVVVKITGHFYACQVAQRKI R D Q V K I 0 0 1 3 0 2 1 0 0 0 0 1 0 0 1 0 1 0 0 3 0 0 13 0 1485.6947 O00425 O00425 526 538 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 2 0.0034782 121.29 By MS/MS 5 0 1 1 564530 564530 0 2743 93 2842 6841 4928 4928 1 23205 0 DQVANSAFVER KENQKHIYYITGETKDQVANSAFVERLRKH GETKDQVANSAFVERLRKHGLEVIYMIEPI K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 4.6422E-07 187.42 By MS/MS By matching 4.42 1.93 1 1 2 2 3 1 1 1 11 1 51621000 51577000 43913 2744 494 2843 6842;6843;6844;6845;6846;6847;6848;6849;6850;6851;6852;6853 4929;4930;4931;4932;4933;4934;4935;4936 4929 8 1478800 129940 DQVELVENMVTVGK VVPKKHIGNCRTLRKDQVELVENMVTVGKT KDQVELVENMVTVGKTILERNNFTDFTNVR K D Q G K T 0 0 1 1 0 1 2 1 0 0 1 1 1 0 0 0 1 0 0 4 0 0 14 0 1559.7865 Q9NQE9 Q9NQE9 102 115 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 2 9.0288E-08 177.81 By MS/MS 9 0 1 1 255480 255480 0 2745 2588 2844 6854 4937 4937 1 146620 0 DQVLAMLEK EKMAKATGKLKPTSKDQVLAMLEKAKVNMP LKPTSKDQVLAMLEKAKVNMPAKPAPPTKA K D Q E K A 1 0 0 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 0 1045.5478 Q14008 Q14008 1067 1075 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.049233 89.029 By MS/MS 2 0 1 1 0 0 0 2746 1405 2845 6855 4938 4938 1 0 0 DQVLQNLGSVESYSEEK LMMLQHKIRDTQLERDQVLQNLGSVESYSE VLQNLGSVESYSEEKAKKVRSEYEKKLQAM R D Q E K A 0 0 1 1 0 2 3 1 0 0 2 1 0 0 0 3 0 0 1 2 0 0 17 0 1923.9062 Q7Z4S6 Q7Z4S6 697 713 KIF21A Kinesin-like protein KIF21A yes yes 2 0.00016261 132.97 By MS/MS 2 0 1 1 228560 228560 0 2747 1797 2846 6856 4939 4939 1 11360 0 DQVYPQYVIEYTEDK VDTRSNPSVFVIFQKDQVYPQYVIEYTEDK DQVYPQYVIEYTEDKACVIS__________ K D Q D K A 0 0 0 2 0 2 2 0 0 1 0 1 0 0 1 0 1 0 3 2 0 0 15 0 1888.8731 Q7Z2W4 Q7Z2W4 883 897 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 1.2379E-05 145.81 By MS/MS 4.5 0.5 1 1 2 1462100 1462100 0 2748 1777 2847 6857;6858 4940 4940 1 41211 0 DQYSVIFESGDR DLGNLRYWLEEAECRDQYSVIFESGDRTSI ECRDQYSVIFESGDRTSIFWNDVKDPVSIE R D Q D R T 0 1 0 2 0 1 1 1 0 1 0 0 0 1 0 2 0 0 1 1 0 0 12 0 1414.6365 P55884 P55884 304 315 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 7.5536E-11 198.81 By MS/MS 3 1.41 1 1 1 1 1 5 2927300 2927300 0 2749 1040 2848 6859;6860;6861;6862;6863 4941 4941 1 88446 0 DRDMDELKK AVSEQGDKKGKKGKKDRDMDELKKEVSMDD GKKGKKDRDMDELKKEVSMDDHKLSLDELH K D R K K E 0 1 0 3 0 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 9 2 1148.5496 P05023 P05023 29 37 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.0050959 110.38 By MS/MS 2.33 1.25 1 1 1 3 1310600 1310600 0 2750 463 2849 6864;6865;6866 4942;4943 4943 2 49024 0 DREEALHQFR EGYACTSIHGDRSQRDREEALHQFRSGKSP DRSQRDREEALHQFRSGKSPILVATAVAAR R D R F R S 1 2 0 1 0 1 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1299.632 O00571;O15523 O00571 479 488 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 0.0019491 155.42 By MS/MS 6 1.73 1 1 2 2 2 1 1 10 39361000 39361000 0 2751 105 2850 6867;6868;6869;6870;6871;6872;6873;6874;6875;6876 4944;4945;4946;4947;4948 4947 5 1547900 0 DRGEEDADGSK EKAWKPSSKRTAADKDRGEEDADGSKTQDL AADKDRGEEDADGSKTQDLFRRVRSILNKL K D R S K T 1 1 0 3 0 0 2 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 11 1 1177.4847 Q04637 Q04637 746 756 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 5.5793E-06 182.28 By MS/MS 2 0 1 1 409460 409460 0 2752 1264 2851 6877 4949 4949 1 20352 0 DRNENEIGHSR PMMRQQELIKGICVKDRNENEIGHSRRAAA ICVKDRNENEIGHSRRAAAIGITQVVISRI K D R S R R 0 2 2 1 0 0 2 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 11 1 1325.6072 Q96NB2 Q96NB2 208 218 SFXN2 Sideroflexin-2 yes yes 3 0.00056903 115.92 By MS/MS 8 0 1 1 0 0 0 2753 2231 2852 6878 4950 4950 1 0 0 DRPGDEDWVHR LLEHHALQLCQQTGRDRPGDEDWVHRTSRL QTGRDRPGDEDWVHRTSRLPPQEDTRAQRQ R D R H R T 0 2 0 3 0 0 1 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 11 1 1380.6171 O60826 O60826 221 231 CCDC22 Coiled-coil domain-containing protein 22 yes yes 3 0.0072711 93.011 By MS/MS 5 0 1 1 379490 379490 0 2754 268 2853 6879 4951 4951 1 15599 0 DRVTDALNATR LKVGGTSDVEVNEKKDRVTDALNATRAAVE NEKKDRVTDALNATRAAVEEGIVLGGGCAL K D R T R A 2 2 1 2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 11 1 1230.6317 P10809 P10809 419 429 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.0056856 89.805 By MS/MS 6 0 1 1 1839300 1839300 0 2755 544 2854 6880 4952 4952 1 14343 0 DRYDSDRYR YPPRRGDDSFGDKYRDRYDSDRYRDGYRDG FGDKYRDRYDSDRYRDGYRDGYRDGPRRDM R D R Y R D 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 9 2 1244.5534 P23588 P23588 226 234 EIF4B Eukaryotic translation initiation factor 4B yes no 2 0.021688 123.21 By MS/MS 5.5 0.5 1 1 2 659530 659530 0 2756 672 2855 6881;6882 4953 4953 1 13058 0 DSAATTDEER FLGAENAFNLFVCQKDSAATTDEERQHLQE FVCQKDSAATTDEERQHLQEVGLFHLGEFV K D S E R Q 2 1 0 2 0 0 2 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 10 0 1093.4524 Q16531 Q16531 980 989 DDB1 DNA damage-binding protein 1 yes yes 2 4.1713E-05 172.23 By MS/MS 1.5 0.5 1 1 2 376030 376030 0 2757 1537 2856 6883;6884 4954;4955 4954 2 18529 0 DSAIQQQVANLQMK IEGEWGAFNDIMRRKDSAIQQQVANLQMKI KDSAIQQQVANLQMKIVQEDRAVESRTTDL K D S M K I 2 0 1 1 0 4 0 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 14 0 1572.793 Q14204 Q14204 1229 1242 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.5602E-46 272.94 By MS/MS 1.5 0.5 1 1 2 724800 724800 0 2758 1421 2857 6885;6886 4956;4957 4956 1100 2 35574 0 DSALEFLTQLSR PVLQKRLCHPCWEVRDSALEFLTQLSRHWG EVRDSALEFLTQLSRHWGGQADFRCALLAS R D S S R H 1 1 0 1 0 1 1 0 0 0 3 0 0 1 0 2 1 0 0 0 0 0 12 0 1378.7092 Q6PJG6 Q6PJG6 518 529 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.0021137 120.63 By MS/MS 5.5 0.5 1 1 2 190410 190410 0 2759 1717 2858 6887;6888 4958 4958 1 3274.3 0 DSAQNSVIIVDK SKVWRDQHFVKIQVKDSAQNSVIIVDKNGR QVKDSAQNSVIIVDKNGRLVYLVENPGGYV K D S D K N 1 0 1 2 0 1 0 0 0 2 0 1 0 0 0 2 0 0 0 2 0 0 12 0 1287.667 P02786 P02786 194 205 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.0013141 129.74 By MS/MS 4 0.816 1 1 1 3 2714100 2714100 0 2760 437 2859 6889;6890;6891 4959 4959 1 86209 0 DSAVAISGADSR EDSSPPASSESSSTRDSAVAISGADSRGIL STRDSAVAISGADSRGILEEPLPSTSSEEE R D S S R G 3 1 0 2 0 0 0 1 0 1 0 0 0 0 0 3 0 0 0 1 0 0 12 0 1147.5469 Q7Z6Z7 Q7Z6Z7 2930 2941 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 5.1915E-07 180.19 By MS/MS 1.5 0.5 1 1 2 601610 601610 0 2761 1803 2860 6892;6893 4960;4961 4960 2 29593 0 DSAYQSITHYRPVSASR SEEECKDRERPMYGRDSAYQSITHYRPVSA AYQSITHYRPVSASRSSLDLSYYPTSSSTS R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 P50402 P50402 158 174 EMD Emerin yes yes 3 0.0023129 104.95 By MS/MS 8.5 0.5 1 1 2 5281200 5281200 0 2762 945 2861 6894;6895 4962 4962 1 511650 0 DSDAGSSTPTTSTR EEEVRQKKSSRKRKRDSDAGSSTPTTSTRS RDSDAGSSTPTTSTRSRDKDDESKKQKKRG R D S T R S 1 1 0 2 0 0 0 1 0 0 0 0 0 0 1 4 4 0 0 0 0 0 14 0 1381.5957 P51532 P51532 1416 1429 SMARCA4 Transcription activator BRG1 yes yes 2 3.2393E-12 205.56 By MS/MS 2 0 1 1 295510 295510 0 2763 965 2862 6896 4963 4963 1 14688 0 DSDEADLVLAK ATDSSGELMFLMKWKDSDEADLVLAKEANM MKWKDSDEADLVLAKEANMKCPQIVIAFYE K D S A K E 2 0 0 3 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1174.5717 Q13185 Q13185 144 154 CBX3 Chromobox protein homolog 3 yes yes 2 0.00031295 150.35 By MS/MS 9 0 1 1 322230 322230 0 2764 1344 2863 6897 4964 4964 1 184930 0 DSDKTDTDWR DKDRDDRSFGRDRNRDSDKTDTDWRARPAT RDRNRDSDKTDTDWRARPATDSFDDYPPRR R D S W R A 0 1 0 4 0 0 0 0 0 0 0 1 0 0 0 1 2 1 0 0 0 0 10 1 1237.5211 P23588 P23588 191 200 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.011894 88.134 By matching By MS/MS 5 0 2 1 1 330980 182750 148230 2765 672 2864 6898;6899 4965 4965 1 7511.7 438620 DSEAQLISK D S S K 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 9 0 989.50294 REV__Q9UKG1 yes yes 2 0.0012339 138.06 By MS/MS 1 0 1 1 56396 56396 0 + 2766 3049 2865 6900 4966 4966 1 2755.4 0 DSEEAEIIRK VNYEKLKTDIKVVDRDSEEAEIIRKYVKNT KVVDRDSEEAEIIRKYVKNTHATTHNAYDL R D S R K Y 1 1 0 1 0 0 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 10 1 1188.5986 P09874 P09874 807 816 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 7.3592E-10 199.7 By MS/MS 4 0 1 1 561280 561280 0 2767 521 2866 6901 4967 4967 1 15322 0 DSETGENIR LKEEISKMRELLARKDSETGENIRQAASSL ELLARKDSETGENIRQAASSLQQASLKLFE K D S I R Q 0 1 1 1 0 0 2 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 9 0 1019.452 P38646 P38646 626 634 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0034007 119.21 By MS/MS 5 0 1 1 59268 0 59268 2768 820 2867 6902 4968 4968 1 0 175370 DSETGLLIK LMQHVHKSAVNKDGKDSETGLLIKEKWEAF VNKDGKDSETGLLIKEKWEAFGLRLNHAQQ K D S I K E 0 0 0 1 0 0 1 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 9 0 974.52843 Q9NU22 Q9NU22 782 790 MDN1 Midasin yes yes 2 0.0008567 145.34 By MS/MS 1 0 1 1 182140 182140 0 2769 2635 2868 6903 4969 4969 1 8898.8 0 DSFLGSIPGK KPGLEEAVESACAMRDSFLGSIPGKNAAEY ACAMRDSFLGSIPGKNAAEYKVITVIEPGL R D S G K N 0 0 0 1 0 0 0 2 0 1 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1019.5288 Q9NSE4 Q9NSE4 887 896 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00097847 123.86 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 6792800 5807500 985220 2770 2624 2869 6904;6905;6906;6907;6908 4970 4970 1 215400 985220 DSGAASEQATAAPNPCSSSSR LAPVSGEKRRPASQKDSGAASEQATAAPNP EQATAAPNPCSSSSRTTRRKK_________ K D S S R T 5 1 1 1 1 1 1 1 0 0 0 0 0 0 2 6 1 0 0 0 0 0 21 0 2049.8658 Q9BU23 Q9BU23 681 701 LMF2 Lipase maturation factor 2 yes yes 2 0.016061 81.992 By MS/MS 1.5 0.5 1 1 2 373530 373530 0 2771 2359 2870 6909;6910 4971 4971 1 18344 0 DSGEDVSSPK MIGQDDRNMQITINRDSGEDVSSPKHGKED ITINRDSGEDVSSPKHGKEDPDNMPHVGGN R D S P K H 0 0 0 2 0 0 1 1 0 0 0 1 0 0 1 3 0 0 0 1 0 0 10 0 1019.4407 A3KMH1 A3KMH1 1543 1552 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00081495 131.44 By MS/MS 2 0 1 1 304090 304090 0 2772 13 2871 6911 4972 4972 1 15115 0 DSGNKPPGLLPR INLQLRPSLITGIMKDSGNKPPGLLPRKGL IMKDSGNKPPGLLPRKGLYMANDLKLLRHH K D S P R K 0 1 1 1 0 0 0 2 0 0 2 1 0 0 3 1 0 0 0 0 0 0 12 1 1249.6779 Q9Y2Q3 Q9Y2Q3 50 61 GSTK1 Glutathione S-transferase kappa 1 yes yes 3 0.00016853 144.7 By MS/MS 9 0 1 1 659300 659300 0 2773 2895 2872 6912 4973 4973 1 378380 0 DSGPLFNTDYDILK TASIHVYSIQKAMLKDSGPLFNTDYDILKS KDSGPLFNTDYDILKSNLQNCSKFSAIQCA K D S L K S 0 0 1 3 0 0 0 1 0 1 2 1 0 1 1 1 1 0 1 0 0 0 14 0 1596.7672 Q15054 Q15054 110 123 POLD3 DNA polymerase delta subunit 3 yes yes 2 0.00021888 138.24 By MS/MS 5 0 1 1 262540 262540 0 2774 1473 2873 6913 4974 4974 1 10792 0 DSGPLSDPITGKPYVPLLEAEEVR PELRLQSDDILPLGKDSGPLSDPITGKPYV TGKPYVPLLEAEEVRLSQSLLELWRRRGPV K D S V R L 1 1 0 2 0 0 3 2 0 1 3 1 0 0 4 2 1 0 1 2 0 0 24 1 2581.3275 Q7L2E3 Q7L2E3 389 412 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 3 8.735E-05 86.832 By MS/MS 3.5 0.5 1 1 2 382320 382320 0 2775 1763 2874 6914;6915 4975;4976 4975 2 10178 0 DSGSFLLR QRLLDRLVRRYAETKDSGSFLLRNLKDSER RRYAETKDSGSFLLRNLKDSERMQLLLTLA K D S L R N 0 1 0 1 0 0 0 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 8 0 893.46068 Q8NDZ4 Q8NDZ4 188 195 C3orf58 Deleted in autism protein 1 yes yes 2 0.001422 166.05 By MS/MS 7.5 0.5 1 1 2 1423900 1423900 0 2776 1959 2875 6916;6917 4977 4977 1 29185 0 DSGSISLQETR IDLNLSISSFLSKTKDSGSISLQETRRQKK SKTKDSGSISLQETRRQKKTLKKTRKFIVD K D S T R R 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1191.5731 Q9H2G2 Q9H2G2 776 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 9.6755E-07 178.54 By MS/MS 2 0 1 1 291410 291410 0 2777 2476 2876 6918 4978 4978 1 14485 0 DSGVVPVGTEEAPK ______________________________ RDSGVVPVGTEEAPKVFKMAASMHGQPSPS R D S P K V 1 0 0 1 0 0 2 2 0 0 0 1 0 0 2 1 1 0 0 3 0 0 14 0 1383.6882 Q8IUX1 Q8IUX1 14 27 TMEM126B Complex I assembly factor TMEM126B, mitochondrial yes yes 2 0.00098878 123.67 By MS/MS 9 0 1 1 1471600 1471600 0 2778 1855 2877 6919 4979 4979 1 844560 0 DSGVVPVGTEEAPKVFK ______________________________ GVVPVGTEEAPKVFKMAASMHGQPSPSLED R D S F K M 1 0 0 1 0 0 2 2 0 0 0 2 0 1 2 1 1 0 0 4 0 0 17 1 1757.92 Q8IUX1 Q8IUX1 14 30 TMEM126B Complex I assembly factor TMEM126B, mitochondrial yes yes 2 1.5377E-09 163.51 By MS/MS 9 0 1 1 463120 463120 0 2779 1855 2878 6920 4980 4980 1 265790 0 DSHGVAQVR AKKGLTPSQIGVILRDSHGVAQVRFVTGNK IGVILRDSHGVAQVRFVTGNKILRILKSKG R D S V R F 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 2 0 0 9 0 967.48354 P62277 P62277 56 64 RPS13 40S ribosomal protein S13 yes yes 2;3 0.034005 88.819 By MS/MS By matching 9.75 0.433 1 3 3 1 4549200 4518800 30385 2780 1126 2879 6921;6922;6923;6924 4981;4982 4981 2 4200000 779350 DSIPSEVDYETR LKAGGLSLVVNVMQRDSIPSEVDYETRQGV MQRDSIPSEVDYETRQGVYSICLQLARFLL R D S T R Q 0 1 0 2 0 0 2 0 0 1 0 0 0 0 1 2 1 0 1 1 0 0 12 0 1409.6311 Q9UPU5 Q9UPU5 1221 1232 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.010227 96.756 By MS/MS 2 0 1 1 611570 611570 0 2781 2854 2880 6925 4983 4983 1 30398 0 DSIQSHQESLSVLR LSMKFVSSLLTALFRDSIQSHQESLSVLRS RDSIQSHQESLSVLRSSNEFMRYAVNVALQ R D S L R S 0 1 0 1 0 2 1 0 1 1 2 0 0 0 0 4 0 0 0 1 0 0 14 0 1597.806 Q9NVI1 Q9NVI1 820 833 FANCI Fanconi anemia group I protein yes yes 2;3 4.1823E-18 223.77 By MS/MS 3 0 2 2 2311100 2311100 0 2782 2654 2881 6926;6927 4984;4985 4985 2 60332 0 DSIVAELDR AVRMFADYLAHESRRDSIVAELDREMSRSV AHESRRDSIVAELDREMSRSVDVTNTTFLL R D S D R E 1 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1016.5138 O14579 O14579 98 106 COPE Coatomer subunit epsilon yes yes 2 0.00021751 162.97 By MS/MS 8 0 1 1 4105600 4105600 0 2783 115 2882 6928 4986 4986 1 270850 0 DSIVAELDREMSR AVRMFADYLAHESRRDSIVAELDREMSRSV RRDSIVAELDREMSRSVDVTNTTFLLMAAS R D S S R S 1 2 0 2 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 1 0 0 13 1 1519.7301 O14579 O14579 98 110 COPE Coatomer subunit epsilon yes yes 2;3 0.0019572 145.28 By MS/MS 8 0 3 3 5439200 5439200 0 2784 115 2883;2884 6929;6930;6931 4987;4988;4989 4988 75 3 358830 0 DSIVQGFQWGTR TLPSEVDKALLGSVKDSIVQGFQWGTREGP SVKDSIVQGFQWGTREGPLCDELIRNVKFK K D S T R E 0 1 0 1 0 2 0 2 0 1 0 0 0 1 0 1 1 1 0 1 0 0 12 0 1392.6786 Q15029 Q15029 764 775 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 2.3177E-16 231.07 By MS/MS 3.5 0.5 1 1 2 1211800 1211800 0 2785 1466 2885 6932;6933 4990 4990 1 32987 0 DSLHQPQYVEK AEWIQQNNILSIVLRDSLHQPQYVEKLEKI IVLRDSLHQPQYVEKLEKILRFVIKEKALT R D S E K L 0 0 0 1 0 2 1 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 11 0 1342.6517 Q93008 Q93008 402 412 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2;3 0.0031922 105.2 By MS/MS 2.5 0.957 1 2 2 1 6 1295700 1295700 0 2786 2096 2886 6934;6935;6936;6937;6938;6939 4991;4992 4991 2 51652 0 DSLIFLVDASK EENLEASGDYKYSGRDSLIFLVDASKAMFE YSGRDSLIFLVDASKAMFESQSEDELTPFD R D S S K A 1 0 0 2 0 0 0 0 0 1 2 1 0 1 0 2 0 0 0 1 0 0 11 0 1206.6496 P12956 P12956 36 46 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 4.615E-22 240.38 By MS/MS 7.4 1.85 1 1 1 1 1 5 2358200 2358200 0 2787 569 2887 6940;6941;6942;6943;6944 4993;4994 4993 2 136410 0 DSLIIIDELGR AEMLETASILRSATKDSLIIIDELGRGTST SATKDSLIIIDELGRGTSTYDGFGLAWAIS K D S G R G 0 1 0 2 0 0 1 1 0 3 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1242.682 P43246 P43246 742 752 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.00058417 167.12 By MS/MS 4.5 0.5 1 1 2 1270900 1270900 0 2788 862 2888 6945;6946 4995 4995 1 35422 0 DSLINLK YLAVRPFLPKKKQQKDSLINLKIQKENPKV LPKKKQQKDSLINLKIQKENPKVVNEINIE K D S L K I 0 0 1 1 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 7 0 801.45962 Q8N5K1 Q8N5K1 68 74 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 0.013964 143.02 By MS/MS 10 0 1 1 1230300 1230300 0 2789 1921 2889 6947 4996 4996 1 1307700 0 DSLLQDGEFSMDLR VNGLTLGGQKCSVIRDSLLQDGEFSMDLRT RDSLLQDGEFSMDLRTKSTGGAPTFNVTVT R D S L R T 0 1 0 3 0 1 1 1 0 0 3 0 1 1 0 2 0 0 0 0 0 0 14 0 1624.7403 P07737 P07737 76 89 PFN1 Profilin-1 yes yes 2 5.5319E-08 179.67 By MS/MS 10 0 2 2 689240 689240 0 2790 491 2890;2891 6948;6949 4997;4998 4997 283 2 732590 0 DSLVDIIGICK QFDFTGIDDLENKSKDSLVDIIGICKSYED NKSKDSLVDIIGICKSYEDATKITVRSNNR K D S C K S 0 0 0 2 1 0 0 1 0 3 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1231.6482 P27694 P27694 314 324 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 7.1961E-05 166.07 By MS/MS 5 0 1 1 1566300 1566300 0 2791 708 2892 6950 4999 4999 1 64383 0 DSLYAQGK GKHQPHKVTQYKKGKDSLYAQGKRRYDRKQ TQYKKGKDSLYAQGKRRYDRKQSGYGGQTK K D S G K R 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 8 0 880.42905 P83881 P83881 31 38 RPL36A 60S ribosomal protein L36a yes yes 2 0.0039198 143.11 By MS/MS 10 0 1 1 294210 294210 0 2792 1214 2893 6951 5000 5000 1 312710 0 DSMLKYPDSHQPR SETPGERLREGQTLRDSMLKYPDSHQPRIF LRDSMLKYPDSHQPRIFGGVLESDARSESP R D S P R I 0 1 0 2 0 1 0 0 1 0 1 1 1 0 2 2 0 0 1 0 0 0 13 1 1572.7355 O00165 O00165 127 139 HAX1 HCLS1-associated protein X-1 yes yes 3 0.041216 61.409 By MS/MS 8.5 0.5 1 1 2 979840 979840 0 2793 73 2894 6952;6953 5001 5001 43 1 101170 0 DSNGAILVYDITDEDSFQK AGQERFHALGPIYYRDSNGAILVYDITDED AILVYDITDEDSFQKVKNWVKELRKMLGNE R D S Q K V 1 0 1 4 0 1 1 1 0 2 1 1 0 1 0 2 1 0 1 1 0 0 19 0 2128.9801 Q9UL25 Q9UL25 91 109 RAB21 Ras-related protein Rab-21 yes yes 2 0.0028235 96.673 By MS/MS 9 0 1 1 75741 75741 0 2794 2819 2895 6954 5002 5002 1 43468 0 DSNLHSSTDKEQAER KRKTDKERSSSLNRRDSNLHSSTDKEQAER DSNLHSSTDKEQAERKPRVTGVTNYVMQYV R D S E R K 1 1 1 2 0 1 2 0 1 0 1 1 0 0 0 3 1 0 0 0 0 0 15 1 1715.7711 Q8IWC1 Q8IWC1 228 242 MAP7D3 MAP7 domain-containing protein 3 yes yes 3 0.016461 74.338 By MS/MS 3 0 1 1 616740 616740 0 2795 1864 2896 6955 5003 5003 1 16100 0 DSNLLLEDVTWK QQVHCWAWLKKHMPKDSNLLLEDVTWKYTA MPKDSNLLLEDVTWKYTALNLIGPRAVDVL K D S W K Y 0 0 1 2 0 0 1 0 0 0 3 1 0 0 0 1 1 1 0 1 0 0 12 0 1431.7246 Q8NCN5 Q8NCN5 609 620 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 6.2731E-11 201.46 By MS/MS 4.5 0.5 1 1 2 875110 875110 0 2796 1955 2897 6956;6957 5004;5005 5004 2 25845 0 DSNVLSVIIK RKEQIPLKPKEKRERDSNVLSVIIKGDVDG EKRERDSNVLSVIIKGDVDGSVEAILNIID R D S I K G 0 0 1 1 0 0 0 0 0 2 1 1 0 0 0 2 0 0 0 2 0 0 10 0 1086.6285 P46199 P46199 512 521 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 2.0424E-10 198.61 By MS/MS 5 0 1 1 638350 638350 0 2797 879 2898 6958 5006 5006 1 26239 0 DSPDLLLLLR VRHLQELVGQETLPRDSPDLLLLLRLLALG ETLPRDSPDLLLLLRLLALGQGAWDMIDSQ R D S L R L 0 1 0 2 0 0 0 0 0 0 5 0 0 0 1 1 0 0 0 0 0 0 10 0 1153.6707 Q8WX92 Q8WX92 334 343 NELFB Negative elongation factor B yes yes 2 0.00045295 146.81 By MS/MS 6.5 1.12 1 1 1 1 4 1015800 1015800 0 2798 2044 2899 6959;6960;6961;6962 5007;5008;5009 5009 3 33439 0 DSPLLLQQISAMR PGQAPGSVPGPGLVKDSPLLLQQISAMRLH VKDSPLLLQQISAMRLHISQLQHENSILKG K D S M R L 1 1 0 1 0 2 0 0 0 1 3 0 1 0 1 2 0 0 0 0 0 0 13 0 1470.7864 Q14203 Q14203 1089 1101 DCTN1 Dynactin subunit 1 yes yes 2 9.6652E-06 171.67 By MS/MS 3.5 0.5 1 1 2 2152300 2152300 0 2799 1420 2900 6963;6964 5010 5010 1094 1 56272 0 DSPSVWAAVPGK MADGTCQDAAIVGYKDSPSVWAAVPGKTFV GYKDSPSVWAAVPGKTFVNITPAEVGVLVG K D S G K T 2 0 0 1 0 0 0 1 0 0 0 1 0 0 2 2 0 1 0 2 0 0 12 0 1212.6139 P07737;CON__P02584 P07737 27 38 PFN1 Profilin-1 yes no 2 0.0001112 156.83 By MS/MS 10 0 1 1 1475500 1475500 0 2800 491 2901 6965 5011 5011 1 1568300 0 DSPTLSNSGIR ANAPERVVERRRRPRDSPTLSNSGIRATSR RRPRDSPTLSNSGIRATSRTAKQRSGLPPS R D S I R A 0 1 1 1 0 0 0 1 0 1 1 0 0 0 1 3 1 0 0 0 0 0 11 0 1145.5677 Q9HD20 Q9HD20 898 908 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.00034828 148.91 By MS/MS 1.5 0.5 1 1 2 1031000 1031000 0 2801 2566 2902 6966;6967 5012;5013 5012 2 50707 0 DSQADDPENIK HLKKAENAWKPSQKRDSQADDPENIKTQEL SQKRDSQADDPENIKTQELFRKVRSILNKL R D S I K T 1 0 1 3 0 1 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 11 0 1230.5364 O43432 O43432 740 750 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00027138 152.04 By MS/MS 2 0 1 1 145020 145020 0 2802 200 2903 6968 5014 5014 1 7208.3 0 DSQLGFHR KTADVTKVWGMGLNKDSQLGFHRSRKDKTR WGMGLNKDSQLGFHRSRKDKTRGYEYVLEP K D S H R S 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 958.46208 Q96I51 Q96I51 139 146 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 2 0.0053588 135.77 By MS/MS 7 0 1 1 1823000 1823000 0 2803 2199 2904 6969 5015 5015 1 32577 0 DSQLYAVDYETLTR ARRVRALREQLNRPRDSQLYAVDYETLTRP RDSQLYAVDYETLTRPFSGRRLPVRAWADV R D S T R P 1 1 0 2 0 1 1 0 0 0 2 0 0 0 0 1 2 0 2 1 0 0 14 0 1672.7944 P82930 P82930 30 43 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 5.3949E-60 306.64 By MS/MS 8 0 1 1 1040900 1040900 0 2804 1209 2905 6970 5016 5016 1 68671 0 DSQVVQVVLDGLK QQNVIPPFCNLLSVKDSQVVQVVLDGLKNI VKDSQVVQVVLDGLKNILIMAGDEASTIAE K D S L K N 0 0 0 2 0 2 0 1 0 0 2 1 0 0 0 1 0 0 0 4 0 0 13 0 1398.7718 O00505 O00505 424 436 KPNA3 Importin subunit alpha-4 yes yes 2 0.0002265 175.48 By MS/MS 6 0 1 1 1494100 1494100 0 2805 101 2906 6971 5017 5017 1 11651 0 DSSNVEEAFLR AEHYDILCAIETSAKDSSNVEEAFLRVATE TSAKDSSNVEEAFLRVATELIMRHGGPLFS K D S L R V 1 1 1 1 0 0 2 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 0 1265.5888 Q86YS6 Q86YS6 165 175 RAB43 Ras-related protein Rab-43 yes yes 2 6.693E-06 175.93 By MS/MS 9 0 1 1 457050 457050 0 2806 1849 2907 6972 5018 5018 1 262310 0 DSSVEVR FGVRQKWDQKSQKPRDSSVEVRSDWEVKEE DQKSQKPRDSSVEVRSDWEVKEEMDFPQLM R D S V R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 7 0 790.3821 O15371 O15371 159 165 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.021851 121.29 By MS/MS By matching 6 0 2 1 1 10693000 10578000 115050 2807 172 2908 6973;6974 5019 5019 1 82488 352860 DSTEVEISTGER IHLMNIVSSAGSLERDSTEVEISTGERKGS LERDSTEVEISTGERKGSWSERRNSSIVGR R D S E R K 0 1 0 1 0 0 3 1 0 1 0 0 0 0 0 2 2 0 0 1 0 0 12 0 1321.5998 Q96N67 Q96N67 418 429 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 5.851E-06 175.65 By MS/MS 2 0.816 1 1 1 3 3483900 3483900 0 2808 2230 2909 6975;6976;6977 5020;5021;5022 5020 3 154120 0 DSTGAADPPQPHIVGIQSPDQQAALAR DLSARVTIYQVPLPKDSTGAADPPQPHIVG IVGIQSPDQQAALARHNPARPVFVEGPFSL K D S A R H 5 1 0 3 0 4 0 2 1 2 1 0 0 0 4 2 1 0 0 1 0 0 27 0 2739.3576 Q9BQ95 Q9BQ95 252 278 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes yes 3 0.0037114 59.005 By MS/MS 7 0 1 1 1465000 1465000 0 2809 2308 2910 6978 5023 5023 1 26179 0 DSTLDAAEEIIK KSQFEKFVRFCFIKKDSTLDAAEEIIKAWS IKKDSTLDAAEEIIKAWSVQKS________ K D S I K A 2 0 0 2 0 0 2 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 12 0 1303.6507 Q6YP21 Q6YP21 436 447 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 2 2.228E-07 188.99 By MS/MS 7 0 1 1 480400 480400 0 2810 1739 2911 6979 5024 5024 1 8584.8 0 DSTLIMQLLR EAIAELDTLSEESYKDSTLIMQLLRDNLTL EESYKDSTLIMQLLRDNLTLWTSDTQGDEA K D S L R D 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 10 0 1188.6536 P27348;P62258;P31946;P31947;P61981;P63104;Q04917 P63104 213 222 YWHAQ;YWHAE;YWHAB;SFN;YWHAG;YWHAZ;YWHAH 14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein eta no no 2 1.4993E-08 195.32 By MS/MS 8 0 3 3 2106800 2106800 0 2811 1121;1169;703;760;1111;1268;761 2912;2913 6980;6981;6982 5025;5026;5027;5028 5025 474 4 138990 0 DSTLTEPVVMALLK YHPQLAYCVVQFLEKDSTLTEPVVMALLKY KDSTLTEPVVMALLKYWPKTHSPKEVMFLN K D S L K Y 1 0 0 1 0 0 1 0 0 0 3 1 1 0 1 1 2 0 0 2 0 0 14 0 1515.8218 Q13362 Q13362 278 291 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 2 0.010216 94.297 By MS/MS 6 0 1 1 243410 243410 0 2812 1359 2914 6983 5029 5029 1 1898.1 0 DSVFLSCSEDNR AHAAQVTCVAASPHKDSVFLSCSEDNRILL PHKDSVFLSCSEDNRILLWDTRCPKPASQI K D S N R I 0 1 1 2 1 0 1 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 12 0 1427.5987 Q9BQA1 Q9BQA1 180 191 WDR77 Methylosome protein 50 yes yes 2 5.6085E-07 204.34 By MS/MS By matching 7.8 0.748 2 2 1 3 2 3193400 2961200 232170 2813 2309 2915 6984;6985;6986;6987;6988 5030;5031 5030 2 135790 1583300 DSVTCPTCQGTGR NGDVSQFPYVEFTGRDSVTCPTCQGTGRIP GRDSVTCPTCQGTGRIPRGQENQLVALIPY R D S G R I 0 1 0 1 2 1 0 2 0 0 0 0 0 0 1 1 3 0 0 1 0 0 13 0 1437.5977 Q9NUM4 Q9NUM4 57 69 TMEM106B Transmembrane protein 106B yes yes 2 0.004529 113.61 By MS/MS 1.5 0.5 1 1 2 349960 349960 0 2814 2639 2916 6989;6990 5032 5032 1 17212 0 DSVVLSLLK VSTGEFTDLKQQLERDSVVLSLLKQLQEFS KQQLERDSVVLSLLKQLQEFSTAIEEYNCA R D S L K Q 0 0 0 1 0 0 0 0 0 0 3 1 0 0 0 2 0 0 0 2 0 0 9 0 972.58555 O43264 O43264 102 110 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.1285E-06 184.49 By MS/MS 4.5 0.5 1 1 2 2342700 2342700 0 2815 189 2917 6991;6992 5033;5034 5033 2 66126 0 DSYLILETLPTEYDSR DAEKLKPGDLVGVNKDSYLILETLPTEYDS SYLILETLPTEYDSRVKAMEVDERPTEQYS K D S S R V 0 1 0 2 0 0 2 0 0 1 3 0 0 0 1 2 2 0 2 0 0 0 16 0 1913.9258 P17980 P17980 156 171 PSMC3 26S protease regulatory subunit 6A yes yes 2 1.0155E-14 204.32 By MS/MS 7 0.816 1 1 1 3 5790400 5790400 0 2816 618 2918 6993;6994;6995 5035;5036 5035 2 48934 0 DSYNLLLVAAR QVWRLMLSLGLQPSRDSYNLLLVAARDCGL QPSRDSYNLLLVAARDCGLGDPQVASELLL R D S A R D 2 1 1 1 0 0 0 0 0 0 3 0 0 0 0 1 0 0 1 1 0 0 11 0 1233.6717 O75127 O75127 320 330 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 3.0288E-07 202.2 By MS/MS 5.5 0.5 1 1 2 1117500 1117500 0 2817 280 2919 6996;6997 5037 5037 1 41640 0 DSYVGDEAQSK GRPRHQGVMVGMGQKDSYVGDEAQSKRGIL MGQKDSYVGDEAQSKRGILTLKYPIEHGIV K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P60709;P63267;P68133;P68032;P62736;P63261 P60709 51 61 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 3.3996E-11 210.64 By MS/MS By MS/MS 7 0.707 1 2 1 1 3 5177000 3804500 1372500 2818 1072;1179 2920 6998;6999;7000;7001 5038;5039;5040 5040 3 67987 5904600 DSYVGDEAQSKR GRPRHQGVMVGMGQKDSYVGDEAQSKRGIL GQKDSYVGDEAQSKRGILTLKYPIEHGIVT K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P60709;P63267;P68133;P68032;P62736;P63261 P60709 51 62 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2;3 4.424E-16 204.56 By MS/MS By MS/MS 7.86 1.12 4 1 1 1 3 4 18148000 17517000 630990 2819 1072;1179 2921 7002;7003;7004;7005;7006;7007;7008 5041;5042;5043 5042 3 348240 2961500 DTAASGYGTQNIR NCTAGAVYTYHEKKKDTAASGYGTQNIRLS KKDTAASGYGTQNIRLSRDAVKDFDCCCLS K D T I R L 2 1 1 1 0 1 0 2 0 1 0 0 0 0 0 1 2 0 1 0 0 0 13 0 1352.6321 Q9Y314 Q9Y314 22 34 NOSIP Nitric oxide synthase-interacting protein yes yes 2 1.9347E-36 270.61 By MS/MS 8 0 1 1 1527400 1527400 0 2820 2911 2922 7009 5044 5044 1 100760 0 DTAAWTVGR PTLIELMKDPSVVVRDTAAWTVGRICELLP PSVVVRDTAAWTVGRICELLPEAAINDVYL R D T G R I 2 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 2 1 0 1 0 0 9 0 975.47739 Q14974 Q14974 426 434 KPNB1 Importin subunit beta-1 yes yes 2 0.00013614 168.27 By MS/MS 4 0 1 1 2498900 2498900 0 2821 1452 2923 7010 5045 5045 1 68218 0 DTALETALNAK FQRQLRQEVVVCMRRDTALETALNAKAYKR CMRRDTALETALNAKAYKRSKRQSLREARI R D T A K A 3 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 11 0 1145.5928 P51532 P51532 427 437 SMARCA4 Transcription activator BRG1 yes yes 2 9.4644E-05 162.64 By MS/MS 2 0 1 1 381210 381210 0 2822 965 2924 7011 5046 5046 1 18948 0 DTASLSTTPSESPR IPDSIISRGVQVLPRDTASLSTTPSESPRA RDTASLSTTPSESPRAQATSRLSTASCPTP R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 Q9NQX3 Q9NQX3 259 272 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 2 1.5932E-05 163.45 By MS/MS 4.5 0.5 1 1 2 1051700 1051700 0 2823 2594 2925 7012;7013 5047 5047 1 31155 0 DTDEADLVLAK ATDSCGDLMFLMKWKDTDEADLVLAKEANV MKWKDTDEADLVLAKEANVKCPQIVIAFYE K D T A K E 2 0 0 3 0 0 1 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 11 0 1188.5874 P45973 P45973 144 154 CBX5 Chromobox protein homolog 5 yes yes 2 0.0033023 114.86 By MS/MS 9.5 0.5 1 1 2 689230 689230 0 2824 872 2926 7014;7015 5048 5048 1 608300 0 DTDGGPKEEESPV KPNEVTKAAESPDQKDTDGGPKEEESPV__ QKDTDGGPKEEESPV_______________ K D T P V - 0 0 0 2 0 0 3 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1358.5838 P53985 P53985 488 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.033232 106.16 By MS/MS 1.5 0.5 1 1 2 651970 651970 0 2825 1008 2927 7016;7017 5049 5049 1 32014 0 DTDIVDEAIYYFK PIRSQFKGPAPRETKDTDIVDEAIYYFKAN TKDTDIVDEAIYYFKANVFFKNYEIKNEAD K D T F K A 1 0 0 3 0 0 1 0 0 2 0 1 0 1 0 0 1 0 2 1 0 0 13 0 1590.7454 O15145 O15145 38 50 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 2 0.0039 109.42 By MS/MS 9 0 1 1 116450 116450 0 2826 153 2928 7018 5050;5051;5052 5052 3 66832 0 DTDSINLYK VVENDQGEVVREFMKDTDSINLYKNMRETL VREFMKDTDSINLYKNMRETLVYLTHLDYV K D T Y K N 0 0 1 2 0 0 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 1067.5135 O14980 O14980 447 455 XPO1 Exportin-1 yes yes 2 0.010344 104.06 By MS/MS 4 0 1 1 1726100 1726100 0 2827 142 2929 7019 5053 5053 1 47120 0 DTGEKLTVAENEAETK GPRDMKSCQFVAVRRDTGEKLTVAENEAET TGEKLTVAENEAETKLQAILEDIQVTLFTR R D T T K L 2 0 1 1 0 0 4 1 0 0 1 2 0 0 0 0 3 0 0 1 0 0 16 1 1733.8319 P07814 P07814 1385 1400 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 2.7478E-09 209.11 By MS/MS 3.8 0.748 2 2 1 5 3342100 3342100 0 2828 493 2930 7020;7021;7022;7023;7024 5054;5055 5055 2 90096 0 DTGKTPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 P60866 P60866 5 19 RPS20 40S ribosomal protein S20 yes yes 3;4 0.00022066 115.12 By MS/MS By matching 10 0 4 2 2 3863600 3600200 263490 2829 1075 2931 7025;7026;7027;7028 5056;5057 5057 2 3826600 6758400 DTGLGLSPTASLR DTITEWKAGALCLSRDTGLGLSPTASLRVF SRDTGLGLSPTASLRVFQPFFVELTMPYSV R D T L R V 1 1 0 1 0 0 0 2 0 0 3 0 0 0 1 2 2 0 0 0 0 0 13 0 1286.683 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 780 792 yes yes 2 2.7171E-05 166.86 By MS/MS 5.5 4.03 1 1 1 1 4 2256100 2256100 0 + 2830 30 2932 7029;7030;7031;7032 5058;5059 5059 2 795120 0 DTGNFVIGQILSDQSR KGLDIVRRDWCDLAKDTGNFVIGQILSDQS TGNFVIGQILSDQSRDTIVENIQKRLIEIG K D T S R D 0 1 1 2 0 2 0 2 0 2 1 0 0 1 0 2 1 0 0 1 0 0 16 0 1748.8693 P09884 P09884 1090 1105 POLA1 DNA polymerase alpha catalytic subunit yes yes 2 2.2106E-07 161.21 By MS/MS 3 0 1 1 165670 165670 0 2831 522 2933 7033 5060 5060 1 4324.7 0 DTHKSEIAHR LLLFSSAYSRGVFRRDTHKSEIAHRFKDLG GVFRRDTHKSEIAHRFKDLGEEHFKGLVLI R D T H R F 1 1 0 1 0 0 1 0 2 1 0 1 0 0 0 1 1 0 0 0 0 0 10 1 1192.5949 CON__P02769 CON__P02769 25 34 yes yes 3 0.0007096 124.67 By MS/MS 7 0.816 1 1 1 3 1595800 1595800 0 + 2832 43 2934 7034;7035;7036 5061 5061 1 20663 0 DTIFDNILK IHGREFDQKALLEFRDTIFDNILKGSRVLV ALLEFRDTIFDNILKGSRVLVDARDKLGIP R D T L K G 0 0 1 2 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1077.5706 Q03113 Q03113 95 103 GNA12 Guanine nucleotide-binding protein subunit alpha-12 yes yes 2 0.021626 95.815 By MS/MS 7 0 1 1 88732 88732 0 2833 1261 2935 7037 5062 5062 1 1585.7 0 DTLGLFLR TGKTARAIRDMCLEKDTLGLFLREGSASTE RDMCLEKDTLGLFLREGSASTEVLRTEAEQ K D T L R E 0 1 0 1 0 0 0 1 0 0 3 0 0 1 0 0 1 0 0 0 0 0 8 0 933.52837 O75643 O75643 746 753 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.012567 114.78 By MS/MS 1.5 0.5 1 1 2 175590 175590 0 2834 322 2936 7038;7039 5063 5063 1 8666.3 0 DTLQSELVGQLYK SVPKAVMHFLVNHVKDTLQSELVGQLYKSS VKDTLQSELVGQLYKSSLLDDLLTESEDMA K D T Y K S 0 0 0 1 0 2 1 1 0 0 3 1 0 0 0 1 1 0 1 1 0 0 13 0 1492.7773 O00429 O00429 680 692 DNM1L Dynamin-1-like protein yes yes 2 4.4513E-05 193.28 By MS/MS 5 0 1 1 413730 413730 0 2835 94 2937 7040 5064 5064 1 17006 0 DTLVQGLNEAGDDLEAVAK RKRDEKEKFEPTVFRDTLVQGLNEAGDDLE QGLNEAGDDLEAVAKFLDSTGSRLDYRRYA R D T A K F 3 0 1 3 0 1 2 2 0 0 3 1 0 0 0 0 1 0 0 2 0 0 19 0 1956.964 Q9Y6E2 Q9Y6E2 32 50 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 7.3842E-135 366.02 By MS/MS 6 0 1 1 1097800 1097800 0 2836 3004 2938 7041 5065 5065 1 8560.8 0 DTLYEAVR ______________________________ MSSKVSRDTLYEAVREVLHGNQRKRRKFLE R D T V R E 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 8 0 965.48181 P62906 P62906 8 15 RPL10A 60S ribosomal protein L10a yes yes 2 0.0049803 137.18 By MS/MS 9 0 1 1 213860 213860 0 2837 1159 2939 7042 5066 5066 1 122740 0 DTMDLPEELPGVKPFTR HTPEGISIKPLYSKRDTMDLPEELPGVKPF MDLPEELPGVKPFTRGPYPTMYTFRPWTIR R D T T R G 0 1 0 2 0 0 2 1 0 0 2 1 1 1 3 0 2 0 0 1 0 0 17 1 1943.9663 P22033 P22033 77 93 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 3 0.020923 63.894 By MS/MS 5 0 1 1 894410 894410 0 2838 653 2940 7043 5067 5067 440 1 36764 0 DTMLQALR ELLNGIRAMEDPGVRDTMLQALRFVIQGAG MEDPGVRDTMLQALRFVIQGAGAKVDAVIR R D T L R F 1 1 0 1 0 1 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 8 0 946.4906 Q92616 Q92616 2402 2409 GCN1L1 Translational activator GCN1 yes yes 2 0.0076389 131.03 By MS/MS 2 0 1 1 0 0 0 2839 2068 2941 7044 5068 5068 1 0 0 DTMSDLPEVR ITRLSSGPFRTITVRDTMSDLPEVRNGASA TITVRDTMSDLPEVRNGASALEISYNGEPQ R D T V R N 0 1 0 2 0 0 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 0 10 0 1161.5336 P26358 P26358 1369 1378 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.037188 81.95 By MS/MS 2 0 1 1 623860 623860 0 2840 693 2942 7045 5069 5069 1 31009 0 DTNGENIAESLVAEGLATR KTPQGREYGMIYLGKDTNGENIAESLVAEG ENIAESLVAEGLATRREGMRANNPEQNRLS K D T T R R 3 1 2 1 0 0 3 2 0 1 2 0 0 0 0 1 2 0 0 1 0 0 19 0 1958.9545 Q7KZF4 Q7KZF4 117 135 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0035896 118.21 By MS/MS 4 0 1 1 153890 153890 0 2841 1757 2943 7046 5070 5070 1 4200.9 0 DTNGSQFFITTVK KHYGPGWVSMANAGKDTNGSQFFITTVKTA GKDTNGSQFFITTVKTAWLDGKHVVFGKVL K D T V K T 0 0 1 1 0 1 0 1 0 1 0 1 0 2 0 1 3 0 0 1 0 0 13 0 1456.7198 P23284 P23284 146 158 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 1.2573E-17 238.01 By MS/MS 9 0 1 1 2755800 2755800 0 2842 667 2944 7047 5071 5071 1 1581600 0 DTNVMLVALAAK DYADLVKALKKVVGKDTNVMLVALAAKCLT VGKDTNVMLVALAAKCLTGLAVGLRKKFGQ K D T A K C 3 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 2 0 0 12 0 1244.6799 Q14008 Q14008 331 342 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.2154E-16 215.83 By MS/MS 2 0 1 1 208010 208010 0 2843 1405 2945 7048 5072 5072 1 10339 0 DTPDEPWAFPAR GNLARRAAATQPDAKDTPDEPWAFPAREFL DAKDTPDEPWAFPAREFLRKKLIGKEVCFT K D T A R E 2 1 0 2 0 0 1 0 0 0 0 0 0 1 3 0 1 1 0 0 0 0 12 0 1400.6361 Q7KZF4 Q7KZF4 72 83 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0027078 117.53 By MS/MS 4 0 1 1 341460 341460 0 2844 1757 2946 7049 5073 5073 1 9321.5 0 DTQEVPLEK IRLENNENKPVTNSRDTQEVPLEKAKQVLK PVTNSRDTQEVPLEKAKQVLKIIASYKHTT R D T E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 9 0 1057.5292 Q7Z739;Q9BYJ9;Q9Y5A9 Q9Y5A9 528 536 YTHDF3;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 2 0.021239 96.034 By MS/MS 5.5 0.5 1 1 2 2838100 2838100 0 2845 2966;1804 2947 7050;7051 5074 5074 1 89826 0 DTQGSLDLDGR QYRMPFAWAARPIFKDTQGSLDLDGRFSPL PIFKDTQGSLDLDGRFSPLYKQDSSKLSSE K D T G R F 0 1 0 3 0 1 0 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1175.5418 Q5JSL3 Q5JSL3 537 547 DOCK11 Dedicator of cytokinesis protein 11 yes yes 2 0.0061077 103.08 By MS/MS 2 0 1 1 166550 166550 0 2846 1607 2948 7052 5075 5075 1 8278.4 0 DTQSGSLLFIGR PKLFYADHPFIFLVRDTQSGSLLFIGRLVR LVRDTQSGSLLFIGRLVRPKGDKMRDEL__ R D T G R L 0 1 0 1 0 1 0 2 0 1 2 0 0 1 0 2 1 0 0 0 0 0 12 0 1292.6725 P50454 P50454 394 405 SERPINH1 Serpin H1 yes yes 2 0.011955 136.81 By MS/MS 8.67 1.25 1 1 1 3 16949000 16949000 0 2847 947 2949 7053;7054;7055 5076;5077 5076 1 529060 0 DTQTSITDSCAVYR GKTLLFVRLLTGLYRDTQTSITDSCAVYRV RDTQTSITDSCAVYRVNNNRGNSLTLIDLP R D T Y R V 1 1 0 2 1 1 0 0 0 1 0 0 0 0 0 2 3 0 1 1 0 0 14 0 1615.7148 Q9Y5M8 Q9Y5M8 91 104 SRPRB Signal recognition particle receptor subunit beta yes yes 2 1.209E-59 304.38 By MS/MS By matching 8.75 0.829 2 1 1 3 1 10897000 10874000 23033 2848 2976 2950 7056;7057;7058;7059 5078;5079 5079 2 1398500 196500 DTSASAVAVGLK KMQLLEIITTEKTSKDTSASAVAVGLKQGK TSKDTSASAVAVGLKQGKVIIVVKDGPGFY K D T L K Q 3 0 0 1 0 0 0 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 12 0 1117.5979 P40939 P40939 520 531 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 3.7975E-17 230.24 By MS/MS 6 1 1 1 2 16886000 16886000 0 2849 835 2951 7060;7061 5080;5081 5080 2 679460 0 DTSEDIEELVEPVAAHGPK QPFKPLSIGGIIILKDTSEDIEELVEPVAA DIEELVEPVAAHGPKIEEEEQEPEPPEPFE K D T P K I 2 0 0 2 0 0 4 1 1 1 1 1 0 0 2 1 1 0 0 2 0 0 19 0 2034.9746 Q99460 Q99460 916 934 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 7.3587E-15 189.3 By MS/MS 3.67 0.471 1 2 3 5655500 5655500 0 2850 2268 2952 7062;7063;7064 5082;5083 5083 2 154240 0 DTSFEQHVLWHTGGK ARFPQLDSTSFANSRDTSFEQHVLWHTGGK DTSFEQHVLWHTGGKGVDLVLNSLAEEKLQ R D T G K G 0 0 0 1 0 1 1 2 2 0 1 1 0 1 0 1 2 1 0 1 0 0 15 0 1740.822 P49327 P49327 1725 1739 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.047921 59.709 By MS/MS 1 0 1 1 507610 507610 0 2851 915 2953 7065 5084 5084 1 24801 0 DTSNDPGQLLR KGKEVPFFSVLLFARDTSNDPGQLLRNHLN LFARDTSNDPGQLLRNHLNQVGHTGGLEQV R D T L R N 0 1 1 2 0 1 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 11 0 1214.5891 Q96BN8 Q96BN8 264 274 OTULIN Ubiquitin thioesterase otulin yes yes 2 7.4527E-07 182.46 By MS/MS 7.5 0.5 1 1 2 2084000 2084000 0 2852 2130 2954 7066;7067 5085 5085 1 59728 0 DTSSSTVVSTQR EVKVNWATTPSSQKKDTSSSTVVSTQRSQD QKKDTSSSTVVSTQRSQDHFHVFVGDLSPE K D T Q R S 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 4 3 0 0 2 0 0 12 0 1266.6052 P31483 P31483 90 101 TIA1 Nucleolysin TIA-1 isoform p40 yes yes 2 9.9458E-05 157.38 By MS/MS 7 0 1 1 735500 735500 0 2853 754 2955 7068 5086 5086 1 13143 0 DTSVEDALER RADGIVPETWIDGPKDTSVEDALERTYVPC IDGPKDTSVEDALERTYVPCLKTLQEEVME K D T E R T 1 1 0 2 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1133.52 Q96A35 Q96A35 176 185 MRPL24 39S ribosomal protein L24, mitochondrial yes yes 2 6.7205E-11 209.21 By MS/MS 8.5 0.5 1 1 2 2094000 2094000 0 2854 2115 2956 7069;7070 5087;5088 5088 2 607700 0 DTTETDLK LELTKREVEYIALSRDTTETDLKQRREIRA EYIALSRDTTETDLKQRREIRAGTAFYIDQ R D T L K Q 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 0 3 0 0 0 0 0 8 0 921.42911 A3KMH1 A3KMH1 139 146 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.024577 101.33 By MS/MS 2 0 1 1 324200 324200 0 2855 13 2957 7071 5089 5089 1 16115 0 DTTINEIEDTFR ELNKNRHPNFLVVEKDTTINEIEDTFRQFL VEKDTTINEIEDTFRQFLNRDDIGIILINQ K D T F R Q 0 1 1 2 0 0 2 0 0 2 0 0 0 1 0 0 3 0 0 0 0 0 12 0 1452.6733 Q16864 Q16864 42 53 ATP6V1F V-type proton ATPase subunit F yes yes 2 4.4924E-05 167.11 By MS/MS 10 0 1 1 213110 213110 0 2856 1552 2958 7072 5090 5090 1 226520 0 DTTVGTLSQR EAEEVGVEHLLRDIKDTTVGTLSQRITNQV LRDIKDTTVGTLSQRITNQVHGLKGLNSKL K D T Q R I 0 1 0 1 0 1 0 1 0 0 1 0 0 0 0 1 3 0 0 1 0 0 10 0 1076.5462 P51665 P51665 181 190 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 8.8354E-16 223.32 By MS/MS 7.5 0.5 1 1 2 2171900 2171900 0 2857 975 2959 7073;7074 5091 5091 1 44120 0 DTTVQTLTLQPSVK LHLLNRPREYIQLHRDTTVQTLTLQPSVKD RDTTVQTLTLQPSVKDGLIVYEDSPLVKAV R D T V K D 0 0 0 1 0 2 0 0 0 0 2 1 0 0 1 1 4 0 0 2 0 0 14 0 1529.8301 A3KMH1 A3KMH1 810 823 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 3.2906E-18 225.79 By MS/MS 3 1.41 1 1 1 1 1 5 3443400 3443400 0 2858 13 2960 7075;7076;7077;7078;7079 5092;5093;5094 5094 3 130150 0 DTVADAAEMGLAR D T A R 4 1 0 2 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 1 0 0 13 0 1318.6187 REV__A6NMB1 yes yes 2 0.019674 79.489 By MS/MS 9 0 1 1 168360 168360 0 + 2859 3015 2961 7080 5095 5095 1736 1 96624 0 DTVDPVQDEMLAR TEPIISRFDILCVVRDTVDPVQDEMLARFV VRDTVDPVQDEMLARFVVGSHVRHHPSNKE R D T A R F 1 1 0 3 0 1 1 0 0 0 1 0 1 0 1 0 1 0 0 2 0 0 13 0 1487.6926 P49736 P49736 665 677 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.0043271 107.09 By MS/MS 3.5 0.5 1 1 2 953200 953200 0 2860 928 2962 7081;7082 5096 5096 1 25684 0 DTVELQLLK FAVYKPPGLKWKHLRDTVELQLLKGLNARK KWKHLRDTVELQLLKGLNARKPPAPKQRVR R D T L K G 0 0 0 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1057.6019 O95900 O95900 28 36 TRUB2 Probable tRNA pseudouridine synthase 2 yes yes 2 0.00010493 170.3 By MS/MS 7.5 0.5 1 1 2 1786400 1786400 0 2861 414 2963 7083;7084 5097;5098 5098 2 53569 0 DTVLLPQTSFPMK GASNHQPNSNSGRYRDTVLLPQTSFPMKLL YRDTVLLPQTSFPMKLLGRQQPDTELEIQQ R D T M K L 0 0 0 1 0 1 0 0 0 0 2 1 1 1 2 1 2 0 0 1 0 0 13 0 1475.7694 Q9NSE4 Q9NSE4 62 74 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0037828 101.3 By MS/MS 4 0 1 1 443290 443290 0 2862 2624 2964 7085 5099 5099 1550 1 12101 0 DTYGVRPLFK FVLLDTANKKVFLGRDTYGVRPLFKAMTED VFLGRDTYGVRPLFKAMTEDGFLAVCSEAK R D T F K A 0 1 0 1 0 0 0 1 0 0 1 1 0 1 1 0 1 0 1 1 0 0 10 1 1194.6397 P08243 P08243 138 147 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.049119 101.25 By MS/MS 7 0.816 1 1 1 3 16068000 16068000 0 2863 503 2965 7086;7087;7088 5100 5100 1 140580 0 DTYIENEKLISGK SAVEAERLVAGKLKKDTYIENEKLISGKRQ KKDTYIENEKLISGKRQELVTKIDHILDAL K D T G K R 0 0 1 1 0 0 2 1 0 2 1 2 0 0 0 1 1 0 1 0 0 0 13 1 1508.7722 P04843 P04843 580 592 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.00011053 161.93 By MS/MS 5 0 1 1 2469000 2469000 0 2864 458 2966 7089 5101 5101 1 101490 0 DTYVSSFPR SSGNVSNRKDETNARDTYVSSFPRAPSTSD DETNARDTYVSSFPRAPSTSDSVRLKCREM R D T P R A 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 9 0 1070.5033 P23193 P23193 124 132 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.001203 138.4 By MS/MS 7 0 1 1 965730 965730 0 2865 664 2967 7090 5102 5102 1 17258 0 DVAEALR QEVKAATERLSLGSRDVAEALRLSKDIGRL ERLSLGSRDVAEALRLSKDIGRLIEAVETA R D V L R L 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 772.40792 Q5JTZ9;Q9H2T7 Q5JTZ9 813 819 AARS2;RANBP17 Alanine--tRNA ligase, mitochondrial;Ran-binding protein 17 yes no 2 0.042356 106.42 By MS/MS 4 0 1 1 3379100 3379100 0 2866 1611 2968 7091 5103 5103 1 92246 0 DVAEQLEK YEIIIIDDGSPDGTRDVAEQLEKIYGSDRI GSPDGTRDVAEQLEKIYGSDRILLRPREKK R D V E K I 1 0 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 930.46583 O60762 O60762 73 80 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.011049 118.33 By MS/MS 8.5 0.5 1 1 2 10142000 10142000 0 2867 263 2969 7092;7093 5104 5104 1 743000 0 DVAEQLEKIYGSDR YEIIIIDDGSPDGTRDVAEQLEKIYGSDRI RDVAEQLEKIYGSDRILLRPREKKLGLGTA R D V D R I 1 1 0 2 0 1 2 1 0 1 1 1 0 0 0 1 0 0 1 1 0 0 14 1 1621.7948 O60762 O60762 73 86 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0098145 126.83 By MS/MS 8 0 1 1 633000 633000 0 2868 263 2970 7094 5105 5105 1 41759 0 DVAGDASESALLK AVFKGGQDNIPVLKRDVAGDASESALLKCI KRDVAGDASESALLKCIELSSGSVKLMRER R D V L K C 3 0 0 2 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 13 0 1274.6354 P13637 P13637 436 448 ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-3 yes yes 2 0.0028538 117.25 By MS/MS 1.5 0.5 1 1 2 486330 486330 0 2869 575 2971 7095;7096 5106 5106 1 23945 0 DVAIKEPLVDVVDPK HWWENVYGFDMSCIKDVAIKEPLVDVVDPK DVAIKEPLVDVVDPKQLVTNACLIKEVDIY K D V P K Q 1 0 0 3 0 0 1 0 0 1 1 2 0 0 2 0 0 0 0 4 0 0 15 1 1635.9083 Q99873 Q99873 229 243 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.0035935 124.12 By MS/MS 7.5 0.5 1 1 2 728790 728790 0 2870 2296 2972 7097;7098 5107 5107 1 19293 0 DVAKPVIELYK DDKPEAVAARLRQYKDVAKPVIELYKSRGV RQYKDVAKPVIELYKSRGVLHQFSGTETNK K D V Y K S 1 0 0 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 1 2 0 0 11 1 1273.7282 P27144 P27144 176 186 AK4 Adenylate kinase 4, mitochondrial yes yes 2;3 0.012465 105.17 By MS/MS 8 0 2 2 23793000 23793000 0 2871 702 2973 7099;7100 5108;5109 5109 2 1569600 0 DVALLQER PNSRASQNPGAAQPRDVALLQERANKLVKY PGAAQPRDVALLQERANKLVKYLMLKDYTK R D V E R A 1 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 942.51345 Q9Y5V3 Q9Y5V3 467 474 MAGED1 Melanoma-associated antigen D1 yes yes 2 0.015297 112.84 By MS/MS 4 0.816 1 1 1 3 2236500 2236500 0 2872 2982 2974 7101;7102;7103 5110 5110 1 62376 0 DVALLQGR AKLQSSQEPEAPPPRDVALLQGRANDLVKY PEAPPPRDVALLQGRANDLVKYLLAKDQTK R D V G R A 1 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 870.49232 Q9UNF1 Q9UNF1 275 282 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.027478 100.19 By MS/MS 5 0 1 1 1074100 1074100 0 2873 2840 2975 7104 5111 5111 1 44149 0 DVATVAFCDAQSTQEIHEK LLDGRDCTVEMPILKDVATVAFCDAQSTQE VAFCDAQSTQEIHEKVLNEAVGALMYHTIT K D V E K V 3 0 0 2 1 2 2 0 1 1 0 1 0 1 0 1 2 0 0 2 0 0 19 0 2147.9793 Q13363 Q13363 47 65 CTBP1 C-terminal-binding protein 1 yes yes 2 8.7169E-15 188.13 By MS/MS 7 0 1 1 1100700 1100700 0 2874 1360 2976 7105 5112 5112 1 19669 0 DVAVMQLR VKDRFLRQLDFNSSKDVAVMQLRSGSKFPV LDFNSSKDVAVMQLRSGSKFPVFNMSYNPA K D V L R S 1 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 2 0 0 8 0 930.49569 P53621 P53621 351 358 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.018685 119.17 By MS/MS 1.33 0.471 2 1 3 664520 664520 0 2875 1005 2977;2978 7106;7107;7108 5113;5114 5113 779 2 32605 0 DVAYQYVK KTTWHRISVFRPGLRDVAYQYVKKGSRIYL VFRPGLRDVAYQYVKKGSRIYLEGKIDYGE R D V V K K 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 8 0 984.49165 Q04837 Q04837 96 103 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.010309 119.29 By MS/MS By matching 10 0 2 1 1 5248500 4402200 846280 2876 1267 2979 7109;7110 5115 5115 1 4679100 21706000 DVAYQYVKK KTTWHRISVFRPGLRDVAYQYVKKGSRIYL FRPGLRDVAYQYVKKGSRIYLEGKIDYGEY R D V K K G 1 0 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 0 2 2 0 0 9 1 1112.5866 Q04837 Q04837 96 104 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.040601 103.74 By MS/MS By matching 10 0 2 1 1 419800 311770 108030 2877 1267 2980 7111;7112 5116 5116 1 331380 2770900 DVCTFLR EFDDGTPATMSQIAKDVCTFLRWASEPEHD ATMSQIAKDVCTFLRWASEPEHDHRKRMGL K D V L R W 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7 0 909.43784 P08574 P08574 269 275 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 0.021931 124.37 By MS/MS 8.5 0.5 1 1 2 2694900 2694900 0 2878 505 2981 7113;7114 5117;5118 5118 2 177780 0 DVDETGITVASLER SVSVNDIDLSLYIPRDVDETGITVASLERF RDVDETGITVASLERFSTYTSDKDENKLSE R D V E R F 1 1 0 2 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 14 0 1503.7417 Q8WU90 Q8WU90 341 354 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 2 8.0937E-05 150.51 By MS/MS By matching 6 0 2 1 1 1422100 1391700 30451 2879 2013 2982 7115;7116 5119 5119 1 10852 93390 DVDFELIK IAVNAVLTVADMERRDVDFELIKVEGKVGG VADMERRDVDFELIKVEGKVGGRLEDTKLI R D V I K V 0 0 0 2 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 977.50696 P48643 P48643 203 210 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0043246 140.09 By MS/MS By matching 6.4 1.02 1 2 1 1 4 1 18288000 18255000 32850 2880 909 2983 7117;7118;7119;7120;7121 5120;5121;5122 5121 3 189610 100750 DVDFELIKVEGK IAVNAVLTVADMERRDVDFELIKVEGKVGG ERRDVDFELIKVEGKVGGRLEDTKLIKGVI R D V G K V 0 0 0 2 0 0 2 1 0 1 1 2 0 1 0 0 0 0 0 2 0 0 12 1 1390.7344 P48643 P48643 203 214 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 6.6475E-10 195.83 By MS/MS 5.27 1.6 2 2 2 2 2 1 11 339380000 339380000 0 2881 909 2984 7122;7123;7124;7125;7126;7127;7128;7129;7130;7131;7132 5123;5124;5125;5126;5127;5128 5125 5 3115200 0 DVDFMYVELIQR GYGLFAGPCKVINAKDVDFMYVELIQRCKQ NAKDVDFMYVELIQRCKQMFLTQTDTGDDR K D V Q R C 0 1 0 2 0 1 1 0 0 1 1 0 1 1 0 0 0 0 1 2 0 0 12 0 1526.7439 P78527 P78527 380 391 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.7297E-07 179.42 By MS/MS 2 0.816 1 1 1 3 749620 749620 0 2882 1197 2985 7133;7134;7135 5129;5130;5131 5131 955 3 32540 0 DVDGAYMTK NKRTNAENEFVTIKKDVDGAYMTKVDLQAK FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K D V T K V 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 0 9 0 998.4379 P04264;CON__P04264 P04264 290 298 KRT1 Keratin, type II cytoskeletal 1 no no 2 7.1629E-06 176.44 By MS/MS By MS/MS 5.5 2.69 1 3 1 3 2 3 1 3 1 2 10 10 9348500 3794200 5554300 + 2883 450;45 2986;2987 7136;7137;7138;7139;7140;7141;7142;7143;7144;7145;7146;7147;7148;7149;7150;7151;7152;7153;7154;7155 5132;5133;5134;5135;5136;5137;5138;5139;5140;5141;5142;5143 5132 26 12 983480 12844000 DVDGAYMTKVDLQAK NKRTNAENEFVTIKKDVDGAYMTKVDLQAK DVDGAYMTKVDLQAKLDNLQQEIDFLTALY K D V A K L 2 0 0 3 0 1 0 1 0 0 1 2 1 0 0 0 1 0 1 2 0 0 15 1 1652.808 P04264;CON__P04264 P04264 290 304 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.023192 65.472 By matching By MS/MS 2.25 0.829 1 1 2 1 3 855230 226410 628810 + 2884 450;45 2988 7156;7157;7158;7159 5144 5144 26 1 5910.5 826590 DVDGVTDINLGK NLFSNKVLNALKPEKDVDGVTDINLGKLVR PEKDVDGVTDINLGKLVRGDAHECFVSPVA K D V G K L 0 0 1 3 0 0 0 2 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1244.6248 Q6UB35 Q6UB35 178 189 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 1.8255E-11 210.64 By MS/MS By MS/MS 4 0.707 1 2 1 3 1 6931200 6498000 433180 2885 1726 2989 7160;7161;7162;7163 5145;5146 5145 2 180470 905150 DVDLEFLAK VAILKANLRKSPVAKDVDLEFLAKMTNGFS KSPVAKDVDLEFLAKMTNGFSGADLTEICQ K D V A K M 1 0 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1048.5441 P55072 P55072 669 677 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00016052 166.68 By MS/MS 6.4 1.85 1 1 1 1 1 5 13507000 13507000 0 2886 1026 2990 7164;7165;7166;7167;7168 5147;5148;5149 5147 3 432500 0 DVDNALR TQALNRCVSCLPGQRDVDNALRAVGDASKR VSCLPGQRDVDNALRAVGDASKRLLSDSLP R D V L R A 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 801.39808 Q9Y490 Q9Y490 1208 1214 TLN1 Talin-1 yes yes 2 0.020039 126.28 By MS/MS 2.5 0.5 1 1 2 893500 893500 0 2887 2947 2991 7169;7170 5150 5150 1 40795 0 DVDVNLFESTIR EEARKWVSKKLHFEKDVDVNLFESTIRILG FEKDVDVNLFESTIRILGGLLSAYHLSGDS K D V I R I 0 1 1 2 0 0 1 0 0 1 1 0 0 1 0 1 1 0 0 2 0 0 12 0 1406.7042 Q9UKM7 Q9UKM7 323 334 MAN1B1 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase yes yes 2 8.0759E-11 197.73 By MS/MS 4.5 0.5 1 1 2 379120 379120 0 2888 2813 2992 7171;7172 5151;5152 5152 2 13918 0 DVDVYSQILR SEMVPSCPFIYIIRKDVDVYSQILRKLFNE YIIRKDVDVYSQILRKLFNESHGIFLGLQR K D V L R K 0 1 0 2 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 2 0 0 10 0 1206.6245 Q9BW27 Q9BW27 60 69 NUP85 Nuclear pore complex protein Nup85 yes yes 2 0.0018733 117.67 By MS/MS 5 0 1 1 473540 473540 0 2889 2387 2993 7173 5153 5153 1 19464 0 DVEDFLSPLLGK TVIRKVEGDIWALQKDVEDFLSPLLGKTPV LQKDVEDFLSPLLGKTPVTQVNEVTGTLRI K D V G K T 0 0 0 2 0 0 1 1 0 0 3 1 0 1 1 1 0 0 0 1 0 0 12 0 1331.6973 Q13405 Q13405 123 134 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 0.010752 96.171 By MS/MS 10 0 1 1 134440 134440 0 2890 1364 2994 7174 5154 5154 1 142890 0 DVEGSTSPQIGDK YDDCGVKLTIAFQAKDVEGSTSPQIGDKVE AKDVEGSTSPQIGDKVEFSISDKQRPGQQV K D V D K V 0 0 0 2 0 1 1 2 0 1 0 1 0 0 1 2 1 0 0 1 0 0 13 0 1331.6205 O75534 O75534 476 488 CSDE1 Cold shock domain-containing protein E1 yes yes 2 1.2917E-11 199.19 By MS/MS 4.5 0.5 1 1 2 1105600 1105600 0 2891 316 2995 7175;7176 5155 5155 1 41542 0 DVEKGELVAK KELAQRGARVYLACRDVEKGELVAKEIQTT YLACRDVEKGELVAKEIQTTTGNQQVLVRK R D V A K E 1 0 0 1 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 2 0 0 10 1 1086.5921 Q8TC12 Q8TC12 74 83 RDH11 Retinol dehydrogenase 11 yes yes 3 0.0086099 94.409 By MS/MS 8 0 1 1 2182100 2182100 0 2892 1992 2996 7177 5156 5156 1 143950 0 DVEQQFK VSGTFLCLDCQTVIRDVEQQFKYTQPNICR LDCQTVIRDVEQQFKYTQPNICRNPVCANR R D V F K Y 0 0 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 7 0 892.42905 Q14566 Q14566 167 173 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.018407 130.77 By MS/MS 4 0 1 1 1586100 1586100 0 2893 1436 2997 7178 5157 5157 1 43300 0 DVERDVFLYR CINEAQRVKLSSPERDVERDVFLYRAYLAQ SSPERDVERDVFLYRAYLAQRKFGVVLDEI R D V Y R A 0 2 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 10 1 1310.6619 O14579 O14579 49 58 COPE Coatomer subunit epsilon yes yes 3 0.0245 105.98 By MS/MS 8 0 1 1 4417000 4417000 0 2894 115 2998 7179 5158 5158 1 291390 0 DVEVTKEEFAQSAIR ELVRKIYSTLAGTRKDVEVTKEEFAQSAIR DVEVTKEEFAQSAIRYGQVTPLEIDILYQL K D V I R Y 2 1 0 1 0 1 3 0 0 1 0 1 0 1 0 1 1 0 0 2 0 0 15 1 1720.8632 O75746 O75746 245 259 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2;3 3.4833E-07 175.28 By MS/MS 5 0 2 2 9780400 9780400 0 2895 327 2999 7180;7181 5159;5160 5160 2 402010 0 DVEVTKEEFVLAAQK ELIRKIYSTLAGTRKDVEVTKEEFVLAAQK DVEVTKEEFVLAAQKFGQVTPMEVDILFQL K D V Q K F 2 0 0 1 0 1 3 0 0 0 1 2 0 1 0 0 1 0 0 3 0 0 15 1 1704.8934 Q9UJS0 Q9UJS0 246 260 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 1.4273E-22 215.02 By MS/MS 5.4 1.02 1 2 1 1 5 21429000 21429000 0 2896 2798 3000 7182;7183;7184;7185;7186 5161;5162;5163 5162 3 744890 0 DVFGLDFGTTSAK PTLTYEERVGFKKSRDVFGLDFGTTSAKQP SRDVFGLDFGTTSAKQPTQPASELPSGRLF R D V A K Q 1 0 0 2 0 0 0 2 0 0 1 1 0 2 0 1 2 0 0 1 0 0 13 0 1356.6561 Q8N653 Q8N653 363 375 LZTR1 Leucine-zipper-like transcriptional regulator 1 yes yes 2 0.0014285 143 By MS/MS 4.5 0.5 1 1 2 197580 197580 0 2897 1926 3001 7187;7188 5164 5164 1 5966 0 DVFISAAER EHVPLSLDRAMRLVKDVFISAAERDVYTGD AMRLVKDVFISAAERDVYTGDALRICIVTK K D V E R D 2 1 0 1 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1006.5084 P20618 P20618 205 213 PSMB1 Proteasome subunit beta type-1 yes yes 2 0.0025589 123.86 By MS/MS 9.5 0.5 1 1 2 2540600 2540600 0 2898 643 3002 7189;7190 5165 5165 1 1510600 0 DVGGEGVQQGLLK EVDKIGSVPGIHQLRDVGGEGVQQGLLKLL LRDVGGEGVQQGLLKLLEGTIVNVPEKNSR R D V L K L 0 0 0 1 0 2 1 4 0 0 2 1 0 0 0 0 0 0 0 2 0 0 13 0 1298.683 O76031 O76031 374 386 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 5.1425E-46 279.77 By MS/MS By MS/MS 6.2 1.17 2 1 1 1 4 1 29344000 29307000 37241 2899 344 3003 7191;7192;7193;7194;7195 5166;5167;5168;5169;5170 5168 5 669270 110200 DVGIEDNQLGAFLTK LDFEKDIKQMLLFLKDVGIEDNQLGAFLTK DVGIEDNQLGAFLTKNHAIFSEDLENLKTR K D V T K N 1 0 1 2 0 1 1 2 0 1 2 1 0 1 0 0 1 0 0 1 0 0 15 0 1618.8203 Q96E29 Q96E29 197 211 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 8.7264E-10 211.77 By MS/MS 7 0 1 1 1753300 1753300 0 2900 2158 3004 7196 5171 5171 1 31332 0 DVGNLLR NTSVYHISGKKKTFKDVGNLLRSHGIDLDH SGKKKTFKDVGNLLRSHGIDLDHNRFLILQ K D V L R S 0 1 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 785.43955 Q9NTJ3 Q9NTJ3 208 214 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.024601 118.69 By MS/MS 3 0 1 1 342350 342350 0 2901 2630 3005 7197 5172 5172 1 8937.1 0 DVIEEYFK SCVVVKDYGKESQAKDVIEEYFKCKK____ GKESQAKDVIEEYFKCKK____________ K D V F K C 0 0 0 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1041.5019 P25398 P25398 122 129 RPS12 40S ribosomal protein S12 yes yes 2 0.021557 104.75 By MS/MS By matching 10 0 2 1 1 7085700 7029800 55922 2902 684 3006 7198;7199 5173 5173 1 7471900 1434400 DVIIDLLCYR RATRLAFEYQRQFRKDVIIDLLCYRQWGHN RQFRKDVIIDLLCYRQWGHNELDEPFYTNP K D V Y R Q 0 1 0 2 1 0 0 0 0 2 2 0 0 0 0 0 0 0 1 1 0 0 10 0 1278.6642 Q96HY7 Q96HY7 422 431 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes yes 2 0.0001329 161.92 By MS/MS 5 0.816 1 1 1 3 453240 453240 0 2903 2198 3007 7200;7201;7202 5174 5174 1 11056 0 DVIMREFR FTVSAMHGDMDQKERDVIMREFRSGSSRVL DMDQKERDVIMREFRSGSSRVLITTDLLAR R D V F R S 0 2 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 8 1 1064.5437 P60842;Q14240 P60842 312 319 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 3 0.029374 84.916 By MS/MS 6.5 0.5 1 1 2 20000000 20000000 0 2904 1074 3008 7203;7204 5175 5175 843 1 165120 0 DVLDFYNVPIQDR HVVPNSRLHQMCRVRDVLDFYNVPIQDRSK VRDVLDFYNVPIQDRSKFDELSASNLPPNL R D V D R S 0 1 1 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 13 0 1592.7835 Q8N5N7 Q8N5N7 125 137 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 2 4.4662E-08 191.79 By MS/MS 10 0 1 1 436000 436000 0 2905 1925 3009 7205 5176 5176 1 463430 0 DVLETPVDLAGFPVLLSDTAGLR RKPVSIVSPEPGTTRDVLETPVDLAGFPVL LAGFPVLLSDTAGLREGVGPVEQEGVRRAR R D V L R E 2 1 0 3 0 0 1 2 0 0 5 0 0 1 2 1 2 0 0 3 0 0 23 0 2397.2791 Q969Y2 Q969Y2 286 308 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2;3 8.6613E-05 94.463 By MS/MS 6 0 2 2 696040 696040 0 2906 2111 3010 7206;7207 5177;5178;5179 5178 3 5427.7 0 DVLEVGELAK NQVIFPVSYNDKFYKDVLEVGELAKLAYFN DKFYKDVLEVGELAKLAYFNDIAVGAVCCR K D V A K L 1 0 0 1 0 0 2 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 10 0 1071.5812 Q9GZZ1 Q9GZZ1 38 47 NAA50 N-alpha-acetyltransferase 50 yes yes 2 0.0052354 106.68 By MS/MS 9 0 1 1 355680 355680 0 2907 2445 3011 7208 5180 5180 1 204130 0 DVLEYVVFEK DRFGRLMYGQEDVPKDVLEYVVFEKQLTNP EDVPKDVLEYVVFEKQLTNPYGSWRMHTKI K D V E K Q 0 0 0 1 0 0 2 0 0 0 1 1 0 1 0 0 0 0 1 3 0 0 10 0 1239.6387 Q9BRJ2 Q9BRJ2 241 250 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 0.0007541 134.26 By MS/MS 8 0 1 1 779900 779900 0 2908 2322 3012 7209 5181 5181 1 51450 0 DVLLDVAYAYGK AISYHLVQKPFSLTKDVLLDVAYAYGKLSF LTKDVLLDVAYAYGKLSFHQTQVSQRLATD K D V G K L 2 0 0 2 0 0 0 1 0 0 2 1 0 0 0 0 0 0 2 2 0 0 12 0 1325.6867 Q969Z0 Q969Z0 293 304 TBRG4 Protein TBRG4 yes yes 2 6.2016E-05 163.38 By MS/MS 4.5 1.12 1 1 1 1 4 10236000 10236000 0 2909 2112 3013 7210;7211;7212;7213 5182 5182 1 96451 0 DVLLFEHDR PLLTCRPLQGTTLQRDVLLFEHDRGRFFTI GTTLQRDVLLFEHDRGRFFTILGLFCAGQG R D V D R G 0 1 0 2 0 0 1 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1142.572 A0PJW6 A0PJW6 33 41 TMEM223 Transmembrane protein 223 yes yes 2 0.0024319 125.16 By MS/MS 9.5 0.5 1 1 2 1532500 1532500 0 2910 7 3014 7214;7215 5183;5184 5184 2 1129300 0 DVLNDTAPR AQTTMEPHLLEACVRDVLNDTAPRAMAVLE LEACVRDVLNDTAPRAMAVLESLRVIITNF R D V P R A 1 1 1 2 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 9 0 999.49852 P47897 P47897 559 567 QARS Glutamine--tRNA ligase yes yes 2 0.00050482 153.24 By MS/MS 5 0.816 1 1 1 3 2267800 2267800 0 2911 896 3015 7216;7217;7218 5185 5185 1 68760 0 DVLNPVYVER QVLVEEAFGCQLQNRDVLNPVYVERILLLR QLQNRDVLNPVYVERILLLRQGHICRLQDL R D V E R I 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 10 0 1202.6295 Q5JPH6 Q5JPH6 392 401 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.018445 93.442 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 17833000 17776000 57333 2912 1604 3016 7219;7220;7221;7222;7223 5186 5186 1 296500 175840 DVLSVAFSSDNR LTTGTTTRRFVGHTKDVLSVAFSSDNRQIV HTKDVLSVAFSSDNRQIVSGSRDKTIKLWN K D V N R Q 1 1 1 2 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 2 0 0 12 0 1308.631 P63244 P63244 107 118 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 1.0782E-16 224.75 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 13094000 12950000 144710 2913 1178 3017 7224;7225;7226 5187;5188;5189 5188 3 1065400 1234500 DVLVGADSVR GFCFLTNQWAVTNPKDVLVGADSVRAAITF VTNPKDVLVGADSVRAAITFSFFSIFSWGV K D V V R A 1 1 0 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 3 0 0 10 0 1029.5455 O43760 O43760 137 146 SYNGR2 Synaptogyrin-2 yes yes 2 0.0019183 117.53 By MS/MS By matching 8.5 1.12 1 1 1 1 3 1 2506300 2486300 20005 2914 221 3018 7227;7228;7229;7230 5190;5191;5192 5192 3 819500 82124 DVMDSTTTQK YKWNVSRPSLLADSKDVMDSTTTQKYWIDI LADSKDVMDSTTTQKYWIDIQLRWGDYDSH K D V Q K Y 0 0 0 2 0 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 0 0 10 0 1124.502 Q6P2Q9 Q6P2Q9 1650 1659 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 1.4106E-06 177.7 By MS/MS 1.67 0.471 1 2 3 466960 466960 0 2915 1706 3019;3020 7231;7232;7233 5193;5194 5194 1222 2 23177 0 DVNAAIATIK YMACCLLYRGDVVPKDVNAAIATIKTKRSI DVVPKDVNAAIATIKTKRSIQFVDWCPTGF K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 P68363 327 336 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2 0.00011019 175.65 By MS/MS By MS/MS 5.93 2.46 1 1 1 1 1 3 3 2 1 1 12 3 955200000 950600000 4592100 2916 1185;1754;2314 3021 7234;7235;7236;7237;7238;7239;7240;7241;7242;7243;7244;7245;7246;7247;7248 5195;5196;5197;5198;5199;5200;5201;5202;5203;5204;5205;5206;5207 5197 13 31709000 15220000 DVNCLEPWLIK LDDGGDAVFSQLTEKDVNCLEPWLIKEMDA LTEKDVNCLEPWLIKEMDACLSDIWLHKDI K D V I K E 0 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 0 1 0 1 0 0 11 0 1385.7013 Q9H6S0 Q9H6S0 457 467 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.0008397 135.8 By MS/MS 3 0 1 1 173970 173970 0 2917 2511 3022 7249 5208 5208 1 4541.5 0 DVNGELIAVQR AQETDVRAQIRLQFRDVNGELIAVQRSMVC LQFRDVNGELIAVQRSMVCTQKSKKTEFKT R D V Q R S 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1212.6463 Q92878 Q92878 88 98 RAD50 DNA repair protein RAD50 yes yes 2 0.00060088 138.99 By MS/MS 3 0 1 1 587610 587610 0 2918 2083 3023 7250 5209 5209 1 15340 0 DVNGPEPLNSR TLAHFRPIEDNEKSKDVNGPEPLNSRSNKL EKSKDVNGPEPLNSRSNKLHFAFRLYDLDK K D V S R S 0 1 2 1 0 0 1 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 11 0 1196.5786 Q99653 Q99653 101 111 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.0012862 129.82 By MS/MS 9 0 1 1 536500 536500 0 2919 2281 3024 7251 5210 5210 1 307900 0 DVNQQEFVR ______________________________ PGVTVKDVNQQEFVRALAAFLKKSGKLKVP K D V V R A 0 1 1 1 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 9 0 1133.5465 P39019 P39019 8 16 RPS19 40S ribosomal protein S19 yes yes 2 2.27E-09 213.85 By MS/MS 9.5 0.5 1 1 2 7430500 7430500 0 2920 823 3025 7252;7253 5211 5211 1 7799400 0 DVNTNSENWAVVK RASGFVRARGGGDIRDVNTNSENWAVVKAA IRDVNTNSENWAVVKAALVAGMYPNLVHVD R D V V K A 1 0 3 1 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 3 0 0 13 0 1474.7052 Q9H6S0 Q9H6S0 960 972 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.00055885 136.81 By MS/MS 3 0 1 1 604030 604030 0 2921 2511 3026 7254 5212 5212 1 15768 0 DVPAYSQDTFK NPTRSEDLLDYGPFRDVPAYSQDTFKVHYE GPFRDVPAYSQDTFKVHYENNSPFLTITSM R D V F K V 1 0 0 2 0 1 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 0 11 0 1269.5877 P04843 P04843 205 215 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0202 89.171 By MS/MS 5 0 1 1 4107400 4107400 0 2922 458 3027 7255 5213 5213 1 168830 0 DVPLTAEEVEFVVEK RWDQQYVIQLTSMFKDVPLTAEEVEFVVEK DVPLTAEEVEFVVEKALSMFSKMNLQEIPP K D V E K A 1 0 0 1 0 0 4 0 0 0 1 1 0 1 1 0 1 0 0 4 0 0 15 0 1702.8665 Q9NVI1 Q9NVI1 183 197 FANCI Fanconi anemia group I protein yes yes 2 1.3683E-05 144.47 By MS/MS 3 0 1 1 277190 277190 0 2923 2654 3028 7256 5214 5214 1 7236 0 DVPPSINTTNIDTLLVATDQTER KTVTVTRPTGVSFKKDVPPSINTTNIDTLL TNIDTLLVATDQTERIVEPPENIQEKIAFI K D V E R I 1 1 2 3 0 1 1 0 0 2 2 0 0 0 2 1 5 0 0 2 0 0 23 0 2512.2657 A5YKK6 A5YKK6 1065 1087 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 3 0.01179 47.991 By MS/MS 2 0 1 1 60377 60377 0 2924 19 3029 7257 5215 5215 1 3001 0 DVQELLTQYTK GRIQRVARGSGVSTRDVQELLTQYTKFAQM VSTRDVQELLTQYTKFAQMVKKMGGIKGLF R D V T K F 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 0 2 0 1 1 0 0 11 0 1336.6874 P61011 P61011 416 426 SRP54 Signal recognition particle 54 kDa protein yes yes 2 9.5769E-12 213.35 By MS/MS 6.5 0.5 1 1 2 6158900 6158900 0 2925 1082 3030 7258;7259 5216;5217 5216 2 48027 0 DVQGTDASLDEELDRVK PVPGTPDSLSSGSSRDVQGTDASLDEELDR QGTDASLDEELDRVKMS_____________ R D V V K M 1 1 0 4 0 1 2 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 17 1 1888.9014 Q9UJZ1 Q9UJZ1 338 354 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 1.9214E-42 257.81 By MS/MS 7 0 1 1 3973100 3973100 0 2926 2806 3031 7260 5218 5218 1 71000 0 DVQIGDIVTVGECR KRHKNMSVHLSPCFRDVQIGDIVTVGECRP RDVQIGDIVTVGECRPLSKTVRFNVLKVTK R D V C R P 0 1 0 2 1 1 1 2 0 2 0 0 0 0 0 0 1 0 0 3 0 0 14 0 1559.7614 P62280 P62280 119 132 RPS11 40S ribosomal protein S11 yes yes 2 7.1265E-18 217.12 By MS/MS 9 0 1 1 1453700 1453700 0 2927 1127 3032 7261 5219 5219 1 834290 0 DVQIGDIVTVGECRPLSK KRHKNMSVHLSPCFRDVQIGDIVTVGECRP IGDIVTVGECRPLSKTVRFNVLKVTKAAGT R D V S K T 0 1 0 2 1 1 1 2 0 2 1 1 0 0 1 1 1 0 0 3 0 0 18 1 1985.0252 P62280 P62280 119 136 RPS11 40S ribosomal protein S11 yes yes 2 3.1072E-24 217.19 By MS/MS 9 0 1 1 1133900 1133900 0 2928 1127 3033 7262 5220 5220 1 650750 0 DVSHPEAELQK TLEDVAHSDLILHVRDVSHPEAELQKCSVL LHVRDVSHPEAELQKCSVLSTLRGLQLPAP R D V Q K C 1 0 0 1 0 1 2 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1251.6095 O43824 O43824 383 393 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.0019076 121.5 By MS/MS 6 0 1 1 7442400 7442400 0 2929 228 3034 7263 5221 5221 1 58036 0 DVTPPQTSGYIEVTDLQSK ILPPGEVPLKDIYPKDVTPPQTSGYIEVTD PQTSGYIEVTDLQSKKLRYIPIPRSESLSP K D V S K K 0 0 0 2 0 2 1 1 0 1 1 1 0 0 2 2 3 0 1 2 0 0 19 0 2077.0215 A3KMH1 A3KMH1 1443 1461 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 3.3683E-07 136.57 By MS/MS 2.5 0.5 1 1 2 1238200 1238200 0 2930 13 3035 7264;7265 5222 5222 1 53888 0 DVVALIR VSWTKGFKSSGVEGRDVVALIRKAIQRRGD KSSGVEGRDVVALIRKAIQRRGDFDIDIVA R D V I R K 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 2 0 0 7 0 784.48069 P52789 P52789 184 190 HK2 Hexokinase-2 yes yes 2 0.04569 104.11 By MS/MS 4 0 1 1 873050 873050 0 2931 992 3036 7266 5223 5223 1 23833 0 DVVEVLLR TGYTPLHHAALNGHKDVVEVLLRNDALTNV AALNGHKDVVEVLLRNDALTNVADSKGCYP K D V L R N 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 3 0 0 8 0 941.55458 Q92625 Q92625 94 101 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.0090507 121.99 By MS/MS 3 0 1 1 298520 298520 0 2932 2071 3037 7267 5224 5224 1 7792.8 0 DVVGNDVATILSR FQLRRVEEQREQEKRDVVGNDVATILSRRI KRDVVGNDVATILSRRIAVEYSDSEDDSSE R D V S R R 1 1 1 2 0 0 0 1 0 1 1 0 0 0 0 1 1 0 0 3 0 0 13 0 1357.7201 Q9Y6W5 Q9Y6W5 463 475 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 2 5.9961E-12 207.34 By MS/MS 4.5 0.5 1 1 2 911670 911670 0 2933 3013 3038 7268;7269 5225 5225 1 36245 0 DVVQAYPEVR HERDINTDFLLVVLRDVVQAYPEVRIVLMS LVVLRDVVQAYPEVRIVLMSATIDTSMFCE R D V V R I 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 3 0 0 10 0 1174.5982 Q08211 Q08211 529 538 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0024771 115.7 By MS/MS 3.5 0.5 1 1 2 2070000 2070000 0 2934 1287 3039 7270;7271 5226;5227;5228 5226 3 55005 0 DVVTLLAEGLR AQYCQLVRQLLDDHKDVVTLLAEGLRESRK DDHKDVVTLLAEGLRESRKHIEDEKLVRYF K D V L R E 1 1 0 1 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 2 0 0 11 0 1184.6765 O14874 O14874 164 174 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes yes 2 0.001878 121.9 By MS/MS 7 0 1 1 132650 132650 0 2935 131 3040 7272 5229;5230 5229 2 2370.6 0 DVYTGDALR AMRLVKDVFISAAERDVYTGDALRICIVTK ISAAERDVYTGDALRICIVTKEGIREETVS R D V L R I 1 1 0 2 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 9 0 1008.4876 P20618 P20618 214 222 PSMB1 Proteasome subunit beta type-1 yes yes 2 0.0026774 122.52 By MS/MS 9 0.816 1 1 1 3 3665200 3665200 0 2936 643 3041 7273;7274;7275 5231 5231 1 1938300 0 DWLSTLEPR GLVISQMLRKSVETRDWLSTLEPRNVRAVM KSVETRDWLSTLEPRNVRAVMKRVVEDTTA R D W P R N 0 1 0 1 0 0 1 0 0 0 2 0 0 0 1 1 1 1 0 0 0 0 9 0 1115.5611 Q9UID3 Q9UID3 599 607 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.0016822 133.23 By MS/MS 5 0 1 1 220010 220010 0 2937 2791 3042 7276 5232 5232 1 9043.2 0 DWNTLIVGK RPGPQTRSDLLLSGRDWNTLIVGKLSPWIR LLLSGRDWNTLIVGKLSPWIRPDSKVEKIR R D W G K L 0 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 9 0 1044.5604 O14744 O14744 77 85 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0048486 116.05 By MS/MS By MS/MS 5 0 2 1 1 2089100 1998300 90795 2938 125 3043 7277;7278 5233;5234 5234 2 82139 268660 DWVLNEFK WPAMGIHGDKSQQERDWVLNEFKHGKAPIL DKSQQERDWVLNEFKHGKAPILIATDVASR R D W F K H 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 8 0 1049.5182 P17844 P17844 381 388 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.013245 115.49 By MS/MS 5 0 1 1 563160 563160 0 2939 616 3044 7279 5235 5235 1 23148 0 DYDRGYDSR DRYGGRDRYDDRGSRDYDRGYDSRIGSGRR DDRGSRDYDRGYDSRIGSGRRAFGSGYRRD R D Y S R I 0 2 0 3 0 0 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 9 1 1145.4738 P23588 P23588 265 273 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.018742 84.817 By matching By MS/MS 6 0.707 1 2 1 2 2 672640 367070 305570 2940 672 3045 7280;7281;7282;7283 5236 5236 1 4008 907350 DYDSTCVFCR SVGTCEAAGKSPEPKDYDSTCVFCRIAGRQ SPEPKDYDSTCVFCRIAGRQDPGTELLHCE K D Y C R I 0 1 0 2 2 0 0 0 0 0 0 0 0 1 0 1 1 0 1 1 0 0 10 0 1321.5067 Q9NQE9 Q9NQE9 43 52 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 2 2.5332E-21 236.21 By MS/MS 9.5 0.5 1 1 2 764490 764490 0 2941 2588 3046 7284;7285 5237 5237 1 497270 0 DYEEVGVDSVEGEGEEEGEEY GEFSEAREDMAALEKDYEEVGVDSVEGEGE VDSVEGEGEEEGEEY_______________ K D Y E Y - 0 0 0 2 0 0 9 4 0 0 0 0 0 0 0 1 0 0 2 3 0 0 21 0 2347.8976 P68363;Q71U36 P68363 431 451 TUBA1B;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 2 0.0092424 71.976 By MS/MS 6 0 1 1 15592000 15592000 0 2942 1185;1754 3047 7286 5238 5238 1 121580 0 DYETATLSDIK HEAWTDGKEAMLKHRDYETATLSDIKALIR LKHRDYETATLSDIKALIRKHEAFESDLAA R D Y I K A 1 0 0 2 0 0 1 0 0 1 1 1 0 0 0 1 2 0 1 0 0 0 11 0 1254.598 O43707 O43707 440 450 ACTN4 Alpha-actinin-4 yes yes 2 0.00067844 137.95 By MS/MS 4 0 1 1 779890 779890 0 2943 217 3048 7287 5239 5239 1 21290 0 DYGVLLEGSGLALR MNIALLSDLTKQISRDYGVLLEGSGLALRG RDYGVLLEGSGLALRGLFIIDPNGVIKHLS R D Y L R G 1 1 0 1 0 0 1 3 0 0 4 0 0 0 0 1 0 0 1 1 0 0 14 0 1461.7827 P30048 P30048 171 184 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 3.9693E-26 247.96 By MS/MS By matching 9.25 0.433 3 1 3 1 4753800 4649200 104580 2944 731 3049 7288;7289;7290;7291 5240;5241;5242;5243 5240 4 2746900 1127100 DYGVYLEDSGHTLR IRIPLLSDLTHQISKDYGVYLEDSGHTLRG KDYGVYLEDSGHTLRGLFIIDDKGILRQIT K D Y L R G 0 1 0 2 0 0 1 2 1 0 2 0 0 0 0 1 1 0 2 1 0 0 14 0 1623.7529 Q13162 Q13162 187 200 PRDX4 Peroxiredoxin-4 yes yes 2 0.0059635 100.93 By MS/MS 10 0 1 1 140610 140610 0 2945 1343 3050 7292 5244 5244 1 149450 0 DYILEGEPGK IQVVREELKPDQKQRDYILEGEPGKVSNLQ DQKQRDYILEGEPGKVSNLQYLHSYLTYIK R D Y G K V 0 0 0 1 0 0 2 2 0 1 1 1 0 0 1 0 0 0 1 0 0 0 10 0 1119.5448 Q9UHB9 Q9UHB9 363 372 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0065662 131.44 By MS/MS 5 0 1 1 0 0 0 2946 2779 3051 7293 5245 5245 1 0 0 DYKVDQEIINIMQDR EDIMCMYEAEMQWKRDYKVDQEIINIMQDR DYKVDQEIINIMQDRLKACQQREGQNYQQN R D Y D R L 0 1 1 3 0 2 1 0 0 3 0 1 1 0 0 0 0 0 1 1 0 0 15 1 1878.9146 O96000 O96000 89 103 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.008321 81.428 By MS/MS 9 0 1 1 407550 407550 0 2947 417 3052 7294 5246 5246 220 1 233900 0 DYLDFLDDEEDQGIYQSK GTVVLDDVELREAQRDYLDFLDDEEDQGIY DFLDDEEDQGIYQSKVRELISDNQYRLIVN R D Y S K V 0 0 0 5 0 2 2 1 0 1 2 1 0 1 0 1 0 0 2 0 0 0 18 0 2191.9433 P25205 P25205 18 35 MCM3 DNA replication licensing factor MCM3 yes yes 2 1.4206E-18 236.55 By MS/MS 4 0 1 1 239830 239830 0 2948 683 3053 7295 5247 5247 1 6547.1 0 DYLEDQQGGR ANSMGLFLQKTNIIRDYLEDQQGGREFWPQ TNIIRDYLEDQQGGREFWPQEVWSRYVKKL R D Y G R E 0 1 0 2 0 2 1 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 0 1179.5156 P37268 P37268 219 228 FDFT1 Squalene synthase yes yes 2 0.044589 80.231 By MS/MS 7 0 1 1 1761100 1761100 0 2949 814 3054 7296 5248 5248 1 31472 0 DYLKEAVTTLK NDAANSRLIITQVRRDYLKEAVTTLKTVLD QVRRDYLKEAVTTLKTVLDQQQTPSRLAVT R D Y L K T 1 0 0 1 0 0 1 0 0 0 2 2 0 0 0 0 2 0 1 1 0 0 11 1 1279.7024 P42704 P42704 1118 1128 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 1.2379E-09 195.83 By MS/MS 4 0.816 2 2 2 6 51203000 51203000 0 2950 854 3055 7297;7298;7299;7300;7301;7302 5249;5250;5251;5252;5253 5249 5 1353600 0 DYLSPVLADLAQR QVLEPLMNLEVTVARDYLSPVLADLAQRRG ARDYLSPVLADLAQRRGNIQEIQTRQDNKV R D Y Q R R 2 1 0 2 0 1 0 0 0 0 3 0 0 0 1 1 0 0 1 1 0 0 13 0 1459.7671 Q969S9 Q969S9 699 711 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.00019271 165.63 By MS/MS 5.5 0.5 1 1 2 1382000 1382000 0 2951 2107 3056 7303;7304 5254;5255 5255 2 32293 0 DYNPYNYSDSISPFNK SLLHSMPTHSSPRSRDYNPYNYSDSISPFN YNPYNYSDSISPFNKSALKEAMFDDDADQF R D Y N K S 0 0 3 2 0 0 0 0 0 1 0 1 0 1 2 3 0 0 3 0 0 0 16 0 1922.8323 O75122 O75122 1018 1033 CLASP2 CLIP-associating protein 2 yes yes 2 2.6395E-21 259.27 By MS/MS 3 0 1 1 833580 833580 0 2952 279 3057 7305 5256 5256 1 21761 0 DYNVTANSK HGSLFLRTPKIVSGKDYNVTANSKLVIITA KIVSGKDYNVTANSKLVIITAGARQQEGES K D Y S K L 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 1 0 0 9 0 1010.4669 P00338 P00338 82 90 LDHA L-lactate dehydrogenase A chain yes yes 2 0.015967 99.013 By MS/MS 8 0 1 1 1244200 1244200 0 2953 424 3058 7306 5257 5257 1 82082 0 DYPEMEILWLMVK WGYFEDALSHISRTKDYPEMEILWLMVKSW TKDYPEMEILWLMVKSWNTGVLMFSRSKYA K D Y V K S 0 0 0 1 0 0 2 0 0 1 2 1 2 0 1 0 0 1 1 1 0 0 13 0 1665.8146 Q8IYF3 Q8IYF3 857 869 TEX11 Testis-expressed sequence 11 protein yes yes 2 0.031998 56.258 By MS/MS By MS/MS 5 3.16 2 1 1 1 1 1 1 1 1 1 9 1481200 271040 1210100 2954 1880 3059 7307;7308;7309;7310;7311;7312;7313;7314;7315;7316 5258;5259 5258 1285;1286 2 13242 7363300 DYQDNKADVILK KVWINTSDIILVGLRDYQDNKADVILKYNA GLRDYQDNKADVILKYNADEARSLKAYGEL R D Y L K Y 1 0 1 3 0 1 0 0 0 1 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1420.7198 P47813;O14602 P47813 83 94 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2;3 3.924E-06 203.03 By MS/MS 9 0 2 2 4423300 4423300 0 2955 116 3060 7317;7318 5260;5261 5260 2 2538600 0 DYQELMNTK DALQQAKEDLARLLRDYQELMNTKLALDLE LARLLRDYQELMNTKLALDLEIATYRTLLE R D Y T K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 1140.5121 P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 464 472 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.00023991 157.34 By matching By MS/MS 2.17 0.687 1 3 2 2 4 704130 208910 495220 + 2956 450;45;32 3061;3062 7319;7320;7321;7322;7323;7324 5262;5263 5263 12 2 6306.5 501860 DYQGPLKEHEVTIFVR TNVAATFKGIVRAIRDYQGPLKEHEVTIFV YQGPLKEHEVTIFVRRGGPNYQEGLRVMGE R D Y V R R 0 1 0 1 0 1 2 1 1 1 1 1 0 1 1 0 1 0 1 2 0 0 16 1 1929.9949 P53396 P53396 363 378 ACLY ATP-citrate synthase yes yes 3 0.033289 62.104 By MS/MS 3.5 0.5 1 1 2 1129400 1129400 0 2957 1001 3063 7325;7326 5264 5264 1 30464 0 DYQNVPGIEK QSRLDDDPPPSTLLKDYQNVPGIEKVDDVV STLLKDYQNVPGIEKVDDVVKRLLSLEMAN K D Y E K V 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 0 0 0 1 1 0 0 10 0 1161.5666 P82914 P82914 75 84 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.00014513 160.53 By MS/MS 9 0 1 1 2363200 2363200 0 2958 1207 3064 7327 5265 5265 1 1356300 0 DYSAPVNFISAGLK DSDDERPSFGGKRARDYSAPVNFISAGLKK RDYSAPVNFISAGLKKGAAEEAELEDSDDE R D Y L K K 2 0 1 1 0 0 0 1 0 1 1 1 0 1 1 2 0 0 1 1 0 0 14 0 1480.7562 Q9UBB9 Q9UBB9 73 86 TFIP11 Tuftelin-interacting protein 11 yes yes 2 6.3804E-05 152.7 By MS/MS 4 0 1 1 211080 211080 0 2959 2746 3065 7328 5266 5266 1 5762.4 0 DYTGALAVFTR LQALGEAASCQLLARDYTGALAVFTRMQRL LLARDYTGALAVFTRMQRLAREHGSHPVQS R D Y T R M 2 1 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 1 1 0 0 11 0 1212.6139 P23610 P23610 196 206 F8A1 Factor VIII intron 22 protein yes yes 2 1.3697E-08 195.36 By MS/MS 7 0 1 1 577060 577060 0 2960 673 3066 7329 5267 5267 1 10312 0 DYTYEELLNR SFSNQTGPAWAGSERDYTYEELLNRVFNIM AGSERDYTYEELLNRVFNIMREKNPDMVAG R D Y N R V 0 1 1 1 0 0 2 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 10 0 1314.6092 P20042 P20042 173 182 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.00013401 161.79 By MS/MS 6 0 1 1 3187900 3187900 0 2961 638 3067 7330 5268 5268 1 24860 0 DYVAPTANLDQK AAERFAKERRLRIWRDYVAPTANLDQKDKQ IWRDYVAPTANLDQKDKQFVAKVMQVLNAD R D Y Q K D 2 0 1 2 0 1 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 12 0 1333.6514 Q7KZF4 Q7KZF4 328 339 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.051804 73.951 By MS/MS 4 0 1 1 1188200 1188200 0 2962 1757 3068 7331 5269 5269 1 32435 0 DYVAVAR CDELLLGHEKAPAFRDYVAVARGSKDHNIR HEKAPAFRDYVAVARGSKDHNIRAQEPESG R D Y A R G 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 7 0 792.413 P78527 P78527 4076 4082 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.038642 108.98 By MS/MS 1.5 0.5 1 1 2 1768100 1768100 0 2963 1197 3069 7332;7333 5270 5270 1 86866 0 DYVDEQTGDGPVK QEYDSDSDVPEELKRDYVDEQTGDGPVKSV KRDYVDEQTGDGPVKSVSRETLKSRKKSDY R D Y V K S 0 0 0 3 0 1 1 2 0 0 0 1 0 0 1 0 1 0 1 2 0 0 13 0 1421.6311 Q96JG6 Q96JG6 570 582 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 9.7093E-18 223.77 By MS/MS 4 0 1 1 1068500 1068500 0 2964 2208 3070 7334 5271 5271 1 29169 0 DYVDHSETLQK IIADPPLPPASFTLRDYVDHSETLQKLVLL FTLRDYVDHSETLQKLVLLGVDLSKIEKHP R D Y Q K L 0 0 0 2 0 1 1 0 1 0 1 1 0 0 0 1 1 0 1 1 0 0 11 0 1333.615 Q96E29 Q96E29 148 158 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 4.9868E-05 169.41 By MS/MS 7.5 0.5 1 1 2 1071700 1071700 0 2965 2158 3071 7335;7336 5272 5272 1 23695 0 DYVDLFR SGEVRTGKWKVPTYKDYVDLFRHLLSSDQM KWKVPTYKDYVDLFRHLLSSDQMMDSILAD K D Y F R H 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 926.44978 P78527 P78527 526 532 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.020731 124.37 By MS/MS 2 0.816 1 1 1 3 867340 867340 0 2966 1197 3072 7337;7338;7339 5273;5274;5275 5274 3 36223 0 DYVIVSHPMSSEK D Y E K 0 0 0 1 0 0 1 0 1 1 0 1 1 0 1 3 0 0 1 2 0 0 13 0 1490.7075 REV__Q7Z3Z3 yes yes 2 0.029577 74.464 By MS/MS 6 0 1 1 65765000 65765000 0 + 2967 3035 3073 7340 5276 5276 1748 1 512840 0 DYYEILGVSR TAEQVAAVKRVKQCKDYYEILGVSRGASDE VKQCKDYYEILGVSRGASDEDLKKAYRRLA K D Y S R G 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 2 1 0 0 10 0 1213.5979 Q9NXW2 Q9NXW2 110 119 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.00049051 145.34 By MS/MS 7 0 1 1 2320000 2320000 0 2968 2694 3074 7341 5277 5277 1 41460 0 EAAAALVEEETRR ALPYFDQGYEAPGVREAAAALVEEETRRYR VREAAAALVEEETRRYRPTKNYLSYLTAPD R E A R R Y 4 2 0 0 0 0 4 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 13 1 1443.7318 O75934 O75934 30 42 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 2 0.017138 136.49 By MS/MS 8 0 1 1 4702000 4702000 0 2969 337 3075 7342 5278 5278 1 310190 0 EAAATEIRR PHTAWYSEQASLEMREAAATEIRRAITGRI ASLEMREAAATEIRRAITGRIPESLRNCVN R E A R R A 3 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 9 1 1015.5411 P56545 P56545 335 343 CTBP2 C-terminal-binding protein 2 yes yes 2 0.0019899 153.04 By MS/MS 6.5 0.5 1 1 2 6434500 6434500 0 2970 1047 3076 7343;7344 5279 5279 1 97088 0 EAACAQNFR QALQQELAWECDYRREAACAQNFRQLLAND ECDYRREAACAQNFRQLLANDPFFRVPAVV R E A F R Q 3 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 9 0 1065.4662 Q96D53 Q96D53 290 298 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 7.4563E-08 195.81 By MS/MS 7 0.816 1 1 1 3 3289300 3289300 0 2971 2147 3077 7345;7346;7347 5280 5280 1 34504 0 EAAEAEAEVPVVQYVGER GRGHWTAARRSRSRREAAEAEAEVPVVQYV EAEAEVPVVQYVGERAARADRVFVWGFSFS R E A E R A 4 1 0 0 0 1 5 1 0 0 0 0 0 0 1 0 0 0 1 4 0 0 18 0 1944.9429 Q96I51 Q96I51 37 54 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 2 1.3615E-19 212.87 By MS/MS 6.5 0.5 1 1 2 3991500 3991500 0 2972 2199 3078 7348;7349 5281 5281 1 65708 0 EAAENSLVAYK YHRYLAEFATGNDRKEAAENSLVAYKAASD NDRKEAAENSLVAYKAASDIAMTELPPTHP K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1193.5928 P62258 P62258 143 153 YWHAE 14-3-3 protein epsilon yes yes 2 1.4246E-10 198.61 By MS/MS By matching 8.75 0.829 2 1 1 3 1 37455000 37314000 140190 2973 1121 3079 7350;7351;7352;7353 5282;5283 5282 2 2847100 1196000 EAAEQDVEK RANARLFGIRAKRAKEAAEQDVEKKK____ RAKRAKEAAEQDVEKKK_____________ K E A E K K 2 0 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 9 0 1017.4615 P26373 P26373 201 209 RPL13 60S ribosomal protein L13 yes yes 2 0.035141 88.177 By MS/MS 8 0 1 1 62213 0 62213 2974 695 3080 7354 5284 5284 1 0 530760 EAAEVLQNNR QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ DPLNKEAAEVLQNNRRLFEQNVQRSMRGGY K E A N R R 2 1 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1142.568 P61081 P61081 148 157 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 2.8121E-21 234.47 By MS/MS 8.5 1.12 1 1 1 1 4 5851900 5851900 0 2975 1086 3081 7355;7356;7357;7358 5285;5286 5285 2 1950100 0 EAAEVLQNNRR QYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ PLNKEAAEVLQNNRRLFEQNVQRSMRGGYI K E A R R L 2 2 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 1 1298.6691 P61081 P61081 148 158 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.018673 107.69 By MS/MS 9 0 1 1 729800 729800 0 2976 1086 3082 7359 5287 5287 1 418840 0 EAAEYIAQAR LGKYGQKKIREIQEREAAEYIAQARRQYHF EIQEREAAEYIAQARRQYHFESNQRTCNMT R E A A R R 4 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1120.5513 P56589 P56589 44 53 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 3.0789E-06 176.6 By MS/MS By matching 4.8 2.79 1 1 1 1 1 4 1 7269200 7230300 38837 2977 1049 3083 7360;7361;7362;7363;7364 5288;5289;5290 5290 3 214870 119110 EAAIWELEER ERECLNNKQQLMRAREAAIWELEERHLQEK LMRAREAAIWELEERHLQEKHQLLKQQLKD R E A E R H 2 1 0 0 0 0 4 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 10 0 1244.6037 Q9H2G2 Q9H2G2 1005 1014 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.00083186 130.66 By MS/MS 2 0 1 1 206630 206630 0 2978 2476 3084 7365 5291 5291 1 10271 0 EAALGAGFSDK FGTVIQEVKTSNVAREAALGAGFSDKTPAH NVAREAALGAGFSDKTPAHTVTMACISANQ R E A D K T 3 0 0 1 0 0 1 2 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1064.5138 P55084 P55084 118 128 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.00017006 156.16 By MS/MS 7 0.707 1 2 1 4 18185000 18185000 0 2979 1027 3085 7366;7367;7368;7369 5292;5293 5292 2 272770 0 EAALILGVSPTANK GGYYRGGFEPKMTKREAALILGVSPTANKG REAALILGVSPTANKGKIRDAHRRIMLLNH R E A N K G 3 0 1 0 0 0 1 1 0 1 2 1 0 0 1 1 1 0 0 1 0 0 14 0 1382.7769 Q96DA6 Q96DA6 62 75 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 2 9.5407E-06 168.83 By MS/MS 10 0 1 1 874260 874260 0 2980 2149 3086 7370 5294 5294 1 929250 0 EAALPPVSPLK SLTEDRDRGRDAVKREAALPPVSPLKAALS AVKREAALPPVSPLKAALSEEELEKKSKAI R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 Q04637 Q04637 1224 1234 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 7.1155E-05 166.19 By MS/MS 3 0.816 1 1 1 3 11468000 11468000 0 2981 1264 3087 7371;7372;7373 5295;5296;5297;5298;5299;5300 5297 6 570010 0 EAALQAQK GATPLFGLYKRWQQREAALQAQKAQDSYQT YKRWQQREAALQAQKAQDSYQTPQNPGIVP R E A Q K A 3 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 857.46068 Q96Q15 Q96Q15 2225 2232 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.038662 99.375 By MS/MS 1 0 1 1 0 0 0 2982 2241 3088 7374 5301 5301 1 0 0 EAAPQDYEAVAR RLAQPLHACLVQCSREAAPQDYEAVARGSF CSREAAPQDYEAVARGSFSLLWKGAEALLE R E A A R G 4 1 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 12 0 1318.6153 Q14674 Q14674 134 145 ESPL1 Separin yes yes 2 0.017556 88.596 By MS/MS 2 0 1 1 188580 188580 0 2983 1439 3089 7375 5302 5302 1 9373.4 0 EAAQAMYIDSYNSR DDELYQRTRISLLQREAAQAMYIDSYNSRG REAAQAMYIDSYNSRGFMINGNRVLGPCAL R E A S R G 3 1 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 2 0 0 0 14 0 1617.7093 Q9BU61 Q9BU61 53 66 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 1.2892E-35 265.53 By MS/MS 10 0 2 2 1617600 1617600 0 2984 2360 3090;3091 7376;7377 5303;5304 5303 1470 2 1719300 0 EAASQRPLSSSASNR VSSPDVSSVSELTNKEAASQRPLSSSASNR EAASQRPLSSSASNRLSVSSLLAAGAPMSS K E A N R L 3 2 1 0 0 1 1 0 0 0 1 0 0 0 1 5 0 0 0 0 0 0 15 1 1559.7652 Q9ULT8 Q9ULT8 1501 1515 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.048878 100.04 By MS/MS 2.5 0.5 1 1 2 324120 324120 0 2985 2826 3092 7378;7379 5305 5305 1 12842 0 EAATQAQQTLGSTIDK ARETLKNSALSAQLREAATQAQQTLGSTID AATQAQQTLGSTIDKATGILLYGLASRLRD R E A D K A 3 0 0 1 0 3 1 1 0 1 1 1 0 0 0 1 3 0 0 0 0 0 16 0 1660.8268 P47897 P47897 35 50 QARS Glutamine--tRNA ligase yes yes 2 2.8659E-21 228.62 By MS/MS 4.5 0.5 1 1 2 2739600 2739600 0 2986 896 3093 7380;7381 5306 5306 1 108170 0 EAAWAITNATSGGTPEQIR VLIEILQKAEFRTRKEAAWAITNATSGGTP AITNATSGGTPEQIRYLVSLGCIKPLCDLL K E A I R Y 4 1 1 0 0 1 2 2 0 2 0 0 0 0 1 1 3 1 0 0 0 0 19 0 1971.965 O60684;O15131 O60684 397 415 KPNA6;KPNA5 Importin subunit alpha-7;Importin subunit alpha-6 yes no 2 2.4456E-135 377.85 By MS/MS 5.5 0.5 1 1 2 5653800 5653800 0 2987 258 3094 7382;7383 5307 5307 1 49556 0 EAAYHPEVAPDVR NLSRRAIADMLRACKEAAYHPEVAPDVRLR CKEAAYHPEVAPDVRLRALHYGRECANGYL K E A V R L 3 1 0 1 0 0 2 0 1 0 0 0 0 0 2 0 0 0 1 2 0 0 13 0 1452.6997 Q9Y490 Q9Y490 2221 2233 TLN1 Talin-1 yes yes 2 0.017003 85.963 By MS/MS 2 0 1 1 250520 250520 0 2988 2947 3095 7384 5308 5308 1 12452 0 EACGVIVELIK AKQAASGLVGQENAREACGVIVELIKSKKM ENAREACGVIVELIKSKKMAGRAVLLAGPP R E A I K S 1 0 0 0 1 0 2 1 0 2 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1229.669 Q9Y265 Q9Y265 47 57 RUVBL1 RuvB-like 1 yes yes 2 2.6225E-05 172.98 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 43546000 43546000 0 2989 2870 3096 7385;7386;7387;7388;7389;7390;7391;7392 5309;5310;5311;5312;5313 5309 5 530120 0 EACNQDALQEAGTFR KQEESQFHPLEWLAREACNQDALQEAGTFR EACNQDALQEAGTFRHTLWKRVQGAVTPLL R E A F R H 3 1 1 1 1 2 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 15 0 1708.7475 Q63HN8 Q63HN8 3607 3621 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0029025 112.02 By MS/MS 1.5 0.5 1 1 2 324490 324490 0 2990 1666 3097 7393;7394 5314 5314 1 15941 0 EACPELDYFVVFSSVSCGR KPKYSGTLNLDRVTREACPELDYFVVFSSV ELDYFVVFSSVSCGRGNAGQSNYGFANSAM R E A G R G 1 1 0 1 2 0 2 1 0 0 1 0 0 2 1 3 0 0 1 3 0 0 19 0 2220.982 P49327 P49327 2008 2026 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0048197 84.753 By MS/MS 2.5 0.5 1 1 2 172520 172520 0 2991 915 3098 7395;7396 5315;5316 5315 2 7962 0 EACWTISNITAGNR CLLHLLSSPKESIRKEACWTISNITAGNRA KEACWTISNITAGNRAQIQAVIDANIFPVL K E A N R A 2 1 2 0 1 0 1 1 0 2 0 0 0 0 0 1 2 1 0 0 0 0 14 0 1591.7413 O60684;P52294 O60684 355 368 KPNA6;KPNA1 Importin subunit alpha-7;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 2 1.521E-25 294.01 By MS/MS 6 0 1 1 4042600 4042600 0 2992 258;984 3099 7397 5317 5317 1 31524 0 EADASPASAGICR VLQGRLDEARQMLSKEADASPASAGICRIM SKEADASPASAGICRIMGDLMRTMPILSPG K E A C R I 4 1 0 1 1 0 1 1 0 1 0 0 0 0 1 2 0 0 0 0 0 0 13 0 1303.5827 Q9BW27 Q9BW27 219 231 NUP85 Nuclear pore complex protein Nup85 yes yes 2 0.0001829 150.15 By MS/MS 5 0 1 1 525970 525970 0 2993 2387 3100 7398 5318 5318 1 21619 0 EADDIVNWLK RNGDTASPKEYTAGREADDIVNWLKKRTGP YTAGREADDIVNWLKKRTGPAATTLPDGAA R E A L K K 1 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1201.5979 P07237 P07237 121 130 P4HB Protein disulfide-isomerase yes yes 2 6.7354E-10 205.12 By MS/MS 6 0 1 1 0 0 0 2994 487 3101 7399 5319 5319 1 0 0 EADEDAVQFANR WAIVCSVWYLPPMTREADEDAVQFANRVKS MTREADEDAVQFANRVKSAIARQGGLVDLL R E A N R V 3 1 1 2 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 12 0 1363.6004 Q86UL3 Q86UL3 394 405 AGPAT6 Glycerol-3-phosphate acyltransferase 4 yes yes 2 3.0645E-17 280.09 By MS/MS 1 0 1 1 1224000 1224000 0 2995 1822 3102 7400 5320 5320 1 59804 0 EADESLNFEEQILEAAK AAKKLEQLKPRAKPKEADESLNFEEQILEA DESLNFEEQILEAAKSIAAATSALVKAASA K E A A K S 3 0 1 1 0 1 5 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 17 0 1934.9109 Q9Y490 Q9Y490 2334 2350 TLN1 Talin-1 yes yes 2 4.7254E-55 276.51 By MS/MS 2 0 1 1 351940 351940 0 2996 2947 3103 7401 5321 5321 1 17493 0 EADGILKPLPK NVLEIWNLVFIQYNREADGILKPLPKKSID QYNREADGILKPLPKKSIDTGMGLERLVSV R E A P K K 1 0 0 1 0 0 1 1 0 1 2 2 0 0 2 0 0 0 0 0 0 0 11 1 1179.6863 P49588 P49588 225 235 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.0067712 134.77 By MS/MS 4.5 0.5 1 1 2 1467500 1467500 0 2997 921 3104 7402;7403 5322 5322 1 48258 0 EADGSETPEPFAAEAK VTVMLSGIKCPTFRREADGSETPEPFAAEA ADGSETPEPFAAEAKFFTESRLLQRDVQII R E A A K F 4 0 0 1 0 0 4 1 0 0 0 1 0 1 2 1 1 0 0 0 0 0 16 0 1647.7264 Q7KZF4 Q7KZF4 234 249 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 8.9912E-29 238.01 By MS/MS 4 0 1 1 2001400 2001400 0 2998 1757 3105 7404 5323 5323 1 54637 0 EADGSLQPLPQR QLVELWNLVFMQHNREADGSLQPLPQRHVD HNREADGSLQPLPQRHVDTGMGLERLVAVL R E A Q R H 1 1 0 1 0 2 1 1 0 0 2 0 0 0 2 1 0 0 0 0 0 0 12 0 1309.6626 Q5JTZ9 Q5JTZ9 251 262 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 8.0475E-11 197.79 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 8938500 8938500 0 2999 1611 3106 7405;7406;7407;7408;7409;7410 5324;5325 5325 2 239320 0 EADLDVATITK VTEFEQRHHCLELAKEADLDVATITKTVVE ELAKEADLDVATITKTVVENIRKKDNGEFS K E A T K T 2 0 0 2 0 0 1 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 11 0 1174.6081 P57740 P57740 627 637 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.00027667 151.83 By MS/MS 4.5 0.5 1 1 2 2450900 2450900 0 3000 1057 3107 7411;7412 5326 5326 1 73165 0 EAEANLRR TVNGVCEDQLGKAAKEAEANLRRQRRLVRS QLGKAAKEAEANLRRQRRLVRSQVLKYMVP K E A R R Q 2 2 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 957.49919 Q9ULT8 Q9ULT8 1254 1261 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0027806 177.71 By MS/MS 1.5 0.5 1 1 2 468980 468980 0 3001 2826 3108 7413;7414 5327 5327 1 23264 0 EAEDGIIAYDDCGVK FSNPKTTSPNKGKEKEAEDGIIAYDDCGVK EAEDGIIAYDDCGVKLTIAFQAKDVEGSTS K E A V K L 2 0 0 3 1 0 2 2 0 2 0 1 0 0 0 0 0 0 1 1 0 0 15 0 1653.7192 O75534 O75534 453 467 CSDE1 Cold shock domain-containing protein E1 yes yes 2 3.9069E-07 164.04 By MS/MS 5.5 0.5 1 1 2 2949500 2949500 0 3002 316 3109 7415;7416 5328 5328 1 111790 0 EAEEEFWYR HKNEKDMAKATQLLKEAEEEFWYRQHPQPY ATQLLKEAEEEFWYRQHPQPYIFPDSPGGT K E A Y R Q 1 1 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 9 0 1257.5302 Q9Y6M9 Q9Y6M9 66 74 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 2 0.00034853 156.75 By MS/MS 9 0 1 1 988790 988790 0 3003 3010 3110 7417 5329 5329 1 567470 0 EAEILEVLR TARWEYMHSPSENSKEAEILEVLRHPRDWV PSENSKEAEILEVLRHPRDWVR________ K E A L R H 1 1 0 0 0 0 3 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1070.5972 P36551 P36551 439 447 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 2.5832E-05 175.44 By MS/MS 7.5 0.5 1 1 2 2874100 2874100 0 3004 807 3111 7418;7419 5330;5331 5331 2 125470 0 EAELLEPLMPAIR EFIRGSTLRFLCKLKEAELLEPLMPAIRAC LKEAELLEPLMPAIRACLEHRHSYVRRNAV K E A I R A 2 1 0 0 0 0 3 0 0 1 3 0 1 0 2 0 0 0 0 0 0 0 13 0 1480.796 P53618 P53618 129 141 COPB1 Coatomer subunit beta yes yes 2 0.000165 151.22 By MS/MS 4 0.707 1 2 1 4 5994700 5994700 0 3005 1004 3112;3113 7420;7421;7422;7423 5332;5333;5334 5333 768 3 168870 0 EAENQHQVR YIGELCRYLLNQPPREAENQHQVRMALGNG LNQPPREAENQHQVRMALGNGLRQSIWTNF R E A V R M 1 1 1 0 0 2 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1109.5214 Q6P1M0 Q6P1M0 348 356 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.0022591 127.02 By MS/MS 1.5 0.5 1 1 2 384250 384250 0 3006 1701 3114 7424;7425 5335 5335 1 18858 0 EAEPDLLAVLR LLVGLLAAAETQCWKEAEPDLLAVLRGLSE QCWKEAEPDLLAVLRGLSEDFQKAEDASKF K E A L R G 2 1 0 1 0 0 2 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 11 0 1224.6714 Q9UBB6 Q9UBB6 213 223 NCDN Neurochondrin yes yes 2 0.00020954 154.56 By MS/MS 6.5 1.12 1 1 1 1 4 3134000 3134000 0 3007 2745 3115 7426;7427;7428;7429 5336;5337 5336 2 119800 0 EAEPYYLLLPR IPTCFTLYQDEITEREAEPYYLLLPRVSYL ITEREAEPYYLLLPRVSYLTLVTDKVKKHF R E A P R V 1 1 0 0 0 0 2 0 0 0 3 0 0 0 2 0 0 0 2 0 0 0 11 0 1362.7184 Q9H1Y0 Q9H1Y0 31 41 ATG5 Autophagy protein 5 yes yes 2 0.00046697 144.09 By MS/MS 6.5 0.5 1 1 2 734560 734560 0 3008 2468 3116 7430;7431 5338 5338 1 6448.9 0 EAEREGATEEAVRER NMARAARDLADVAAREAEREGATEEAVRER EAEREGATEEAVRERVICCTEDMLEKDLRD R E A E R V 3 3 0 0 0 0 6 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 15 2 1730.8184 Q9BV20 Q9BV20 110 124 MRI1 Methylthioribose-1-phosphate isomerase yes yes 3 3.5314E-07 158.52 By MS/MS 7 0 1 1 1809700 1809700 0 3009 2369 3117 7432 5339 5339 1 32340 0 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK EGAELMESVMDVVRKEAESCDCLQGFQLTH GGGTGSGMGTLLLSKIREEYPDRIINTFSI K E A S K I 1 0 0 1 2 2 2 7 1 0 6 1 1 1 0 4 3 0 0 0 0 0 32 0 3310.5268 Q3ZCM7 Q3ZCM7 123 154 TUBB8 Tubulin beta-8 chain yes yes 3 7.9266E-06 73.919 By MS/MS 6 0 1 1 26739000 26739000 0 3010 1572 3118 7433 5340 5340 1 208510 0 EAESLIAKK DGTTSVTVLAAELLREAESLIAKKIHPQTI AAELLREAESLIAKKIHPQTIIAGWREATK R E A K K I 2 0 0 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 987.56006 P78371 P78371 112 120 CCT2 T-complex protein 1 subunit beta yes yes 2 0.0089986 145.16 By MS/MS 6.5 0.5 1 1 2 27893000 27893000 0 3011 1195 3119 7434;7435 5341;5342 5342 2 227860 0 EAESSPFVER EKQDKIYFMAGSSRKEAESSPFVERLLKKG GSSRKEAESSPFVERLLKKGYEVIYLTEPV K E A E R L 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 2 0 0 0 1 0 0 10 0 1149.5302 P14625 P14625 548 557 HSP90B1 Endoplasmin yes yes 2 0.0059949 104.2 By MS/MS 5 0.816 1 1 1 3 9682200 9682200 0 3012 589 3120 7436;7437;7438 5343 5343 1 265710 0 EAETFKEQGNAYYAK AATEPELLDDQEAKREAETFKEQGNAYYAK EAETFKEQGNAYYAKKDYNEAYNYYTKAID R E A A K K 3 0 1 0 0 1 3 1 0 0 0 2 0 1 0 0 1 0 2 0 0 0 15 1 1747.8053 Q99615 Q99615 27 41 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 7.9187E-09 193.62 By MS/MS 6 0 1 1 2895200 2895200 0 3013 2276 3121 7439 5344 5344 1 22577 0 EAEYFELPELVR LVLPDYFPERSRLQREAEYFELPELVRRLG LQREAEYFELPELVRRLGAPQQPGPGPPPS R E A V R R 1 1 0 0 0 0 4 0 0 0 2 0 0 1 1 0 0 0 1 1 0 0 12 0 1493.7402 Q96CX2 Q96CX2 116 127 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2 0.0073375 99.973 By MS/MS 7.5 0.5 1 1 2 278510 278510 0 3014 2144 3122 7440;7441 5345;5346 5345 2 12084 0 EAFGFIER KKKQARCQGVVCAMKEAFGFIERGDVVKEI GVVCAMKEAFGFIERGDVVKEIFFHYSEFK K E A E R G 1 1 0 0 0 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 8 0 967.47633 O75534 O75534 195 202 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.0193 107.66 By MS/MS 5 0 1 1 2470900 2470900 0 3015 316 3123 7442 5347 5347 1 101570 0 EAFLEQFR LFERTCRQYDKLRKREAFLEQFRKEDMFKD YDKLRKREAFLEQFRKEDMFKDNFDEMDTS R E A F R K 1 1 0 0 0 1 2 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1038.5134 P23258 P23258 402 409 TUBG1 Tubulin gamma-1 chain yes yes 2 0.0075842 127.46 By MS/MS 7.5 0.5 1 1 2 1789800 1789800 0 3016 666 3124 7443;7444 5348 5348 1 34352 0 EAFLQEVWK KLWREQGLSRHQLGREAFLQEVWKWKEEKG RHQLGREAFLQEVWKWKEEKGDRIYHQLKK R E A W K W 1 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 9 0 1148.5866 P26640 P26640 410 418 VARS Valine--tRNA ligase yes yes 2 7.4611E-12 229.44 By MS/MS 4 0.816 1 1 1 3 1626800 1626800 0 3017 699 3125 7445;7446;7447 5349;5350;5351 5349 3 44536 0 EAFLVPAYTEQSQIK FLPFLWLVNIFWFFREAFLVPAYTEQSQIK EAFLVPAYTEQSQIKGYVWRSAVGFLFWVI R E A I K G 2 0 0 0 0 2 2 0 0 1 1 1 0 1 1 1 1 0 1 1 0 0 15 0 1722.8829 Q9NZ42 Q9NZ42 40 54 PSENEN Gamma-secretase subunit PEN-2 yes yes 2 0.010268 93.345 By MS/MS 10 0 1 1 193190 193190 0 3018 2705 3126 7448 5352 5352 1 205340 0 EAFNIIGR IGPKRTAVVRGIMHREAFNIIGRRIVQVAQ VRGIMHREAFNIIGRRIVQVAQAMSLTEDV R E A G R R 1 1 1 0 0 0 1 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 8 0 918.49232 Q96S52 Q96S52 177 184 PIGS GPI transamidase component PIG-S yes yes 2 0.0030756 149.4 By MS/MS 5 0 1 1 2144200 2144200 0 3019 2252 3127 7449 5353 5353 1 88136 0 EAFNLLLR ILIHNAGISSCGRTREAFNLLLRVNHIGPF SSCGRTREAFNLLLRVNHIGPFLLTHLLLP R E A L R V 1 1 1 0 0 0 1 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 974.55492 Q6UX07 Q6UX07 133 140 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 0.013273 115.46 By MS/MS 7.5 0.5 1 1 2 1195700 1195700 0 3020 1732 3128 7450;7451 5354 5354 1 26409 0 EAFQLFDR ______________________________ DQTAEFKEAFQLFDRTGDGKILYSQCGDVM K E A D R T 1 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1024.4978 P60660 P60660 14 21 MYL6 Myosin light polypeptide 6 yes yes 2 0.00061532 180.45 By MS/MS 10 0 1 1 608560 608560 0 3021 1071 3129 7452 5355 5355 1 646830 0 EAFSDGITSVK EDSNLIPKEILWRPKEAFSDGITSVKNSWF WRPKEAFSDGITSVKNSWFKILQEYVEHQV K E A V K N 1 0 0 1 0 0 1 1 0 1 0 1 0 1 0 2 1 0 0 1 0 0 11 0 1152.5663 P08243 P08243 468 478 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.00037736 147.73 By MS/MS By matching 6.33 0.471 2 1 2 1 8578500 8550300 28240 3022 503 3130 7453;7454;7455 5356 5356 1 69274 86611 EAFWLGNLK LVCRVKAMLTLNNCREAFWLGNLKNRDLQG TLNNCREAFWLGNLKNRDLQGEEIKSQNSQ R E A L K N 1 0 1 0 0 0 1 1 0 0 2 1 0 1 0 0 0 1 0 0 0 0 9 0 1076.5655 Q9BXW9 Q9BXW9 1382 1390 FANCD2 Fanconi anemia group D2 protein yes yes 2 3.9145E-08 204.65 By MS/MS 3 0 1 1 510530 510530 0 3023 2405 3131 7456 5357 5357 1 13327 0 EAGAGGLAIAVEGPSK RAEAGVPAEFSIWTREAGAGGLAIAVEGPS AGAGGLAIAVEGPSKAEISFEDRKDGSCGV R E A S K A 4 0 0 0 0 0 2 4 0 1 1 1 0 0 1 1 0 0 0 1 0 0 16 0 1425.7464 P21333 P21333 2265 2280 FLNA Filamin-A yes yes 2 1.4436E-07 166.62 By MS/MS 2.5 0.5 1 1 2 798380 798380 0 3024 648 3132 7457;7458 5358 5358 1 34743 0 EAGELKPEEEITVGPVQK RSLGEIPIVESEIKKEAGELKPEEEITVGP ELKPEEEITVGPVQKLVTEMGTYATQSALS K E A Q K L 1 0 0 0 0 1 5 2 0 1 1 2 0 0 2 0 1 0 0 2 0 0 18 1 1952.0102 P53618 P53618 496 513 COPB1 Coatomer subunit beta yes yes 2;3 1.0421E-10 198.48 By MS/MS By matching 4.67 0.745 3 2 1 5 1 29699000 29612000 87105 3025 1004 3133 7459;7460;7461;7462;7463;7464 5359;5360;5361 5360 3 847270 182010 EAGEQGDIEPR QRINIPPQRGPRPIREAGEQGDIEPRRMVR RPIREAGEQGDIEPRRMVRHPDSHQLFIGN R E A P R R 1 1 0 1 0 1 3 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 11 0 1199.5418 Q13283 Q13283 321 331 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.0066513 101.38 By matching By MS/MS 5.33 0.471 2 1 1 2 331160 240960 90203 3026 1352 3134 7465;7466;7467 5362;5363 5363 2 9904.5 268800 EAGFHQYEVSNFAR ELAAEMYQRGRAVLREAGFHQYEVSNFARN REAGFHQYEVSNFARNGALSTHNWTYWQCG R E A A R N 2 1 1 0 0 1 2 1 1 0 0 0 0 2 0 1 0 0 1 1 0 0 14 0 1653.7536 Q9HA92 Q9HA92 266 279 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial yes yes 2;3 0.00043972 147.62 By MS/MS 7 0 2 2 3845400 3845400 0 3027 2541 3135 7468;7469 5364;5365 5365 2 68718 0 EAGFPPGVVNIVPGFGPTAGAAIASHEDVDK EQTPLTALYVANLIKEAGFPPGVVNIVPGF PTAGAAIASHEDVDKVAFTGSTEIGRVIQV K E A D K V 5 0 1 2 0 0 2 5 1 2 0 1 0 2 4 1 1 0 0 4 0 0 31 0 3018.5087 P05091 P05091 227 257 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 3 0.0044955 47.175 By MS/MS 6 0 1 1 2472300 2472300 0 3028 467 3136 7470 5366 5366 1 19279 0 EAGGGGVGGPGAK SDPFEVLKAAENKKKEAGGGGVGGPGAKSA KKEAGGGGVGGPGAKSAAQAAAQTNSNAAG K E A A K S 2 0 0 0 0 0 1 7 0 0 0 1 0 0 1 0 0 0 0 1 0 0 13 0 1012.4938 Q8NC51 Q8NC51 40 52 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.012343 116.52 By MS/MS By matching 6 0 2 1 1 6811400 6715100 96279 3029 1949 3137 7471;7472 5367 5367 1 52365 295280 EAGISDYLTIEELVK ENCMTIDKLSWGYRREAGISDYLTIEELVK EAGISDYLTIEELVKQLVETVSCGGNLLMN R E A V K Q 1 0 0 1 0 0 3 1 0 2 2 1 0 0 0 1 1 0 1 1 0 0 15 0 1678.8665 Q9BTY2 Q9BTY2 307 321 FUCA2 Plasma alpha-L-fucosidase yes yes 2 9.6763E-21 226.04 By MS/MS 6 0 1 1 1064800 1064800 0 3030 2356 3138 7473 5368 5368 1 8303.3 0 EAGLQMFGQLAR RGEWDSLTPEARREKEAGLQMFGQLARFHN REKEAGLQMFGQLARFHNIMSNETIGTLAF K E A A R F 2 1 0 0 0 2 1 2 0 0 2 0 1 1 0 0 0 0 0 0 0 0 12 0 1319.6656 Q14139 Q14139 833 844 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 7.6087E-05 156.83 By MS/MS 3.5 0.5 2 2 4 1410300 1410300 0 3031 1408 3139;3140 7474;7475;7476;7477 5369;5370;5371 5369 1080 3 37076 0 EAGNINQSLLTLGR SENIGRSGAVDKRAREAGNINQSLLTLGRV REAGNINQSLLTLGRVITALVERTPHVPYR R E A G R V 1 1 2 0 0 1 1 2 0 1 3 0 0 0 0 1 1 0 0 0 0 0 14 0 1484.7947 P52732 P52732 284 297 KIF11 Kinesin-like protein KIF11 yes yes 2 1.4841E-26 250.51 By MS/MS 4 0.816 1 1 1 3 1946500 1946500 0 3032 990 3141 7478;7479;7480 5372;5373 5373 2 53682 0 EAGNLEGILLTGLTK TQLNRYIEKLTNEMKEAGNLEGILLTGLTK EAGNLEGILLTGLTKDGVDLMESYVDRTGD K E A T K D 1 0 1 0 0 0 2 3 0 1 4 1 0 0 0 0 2 0 0 0 0 0 15 0 1527.8508 Q9NXC5 Q9NXC5 642 656 MIOS WD repeat-containing protein mio yes yes 2 0.0053822 127.71 By MS/MS 5 0 1 1 114370 114370 0 3033 2685 3142 7481 5374 5374 1 4701.2 0 EAGVEMGDEDDLSTPNEK PTLRLEYCEALAMLREAGVEMGDEDDLSTP VEMGDEDDLSTPNEKLLGHLVKEKYDTDFY R E A E K L 1 0 1 3 0 0 4 2 0 0 1 1 1 0 1 1 1 0 0 1 0 0 18 0 1934.8051 P14868 P14868 357 374 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 1.2832E-18 199.96 By MS/MS 1.5 0.5 1 1 2 313950 313950 0 3034 594 3143 7482;7483 5375 5375 1 15399 0 EAHQLFLEPEVLDPESVELK LDPNKYPVPENWLHKEAHQLFLEPEVLDPE FLEPEVLDPESVELKWSEPNEEELIKFMCG K E A L K W 1 0 0 1 0 1 5 0 1 0 4 1 0 1 2 1 0 0 0 2 0 0 20 0 2321.1791 P39748 P39748 278 297 FEN1 Flap endonuclease 1 yes yes 3 0.023893 59.792 By MS/MS 6.5 0.5 1 1 2 2154200 2154200 0 3035 826 3144 7484;7485 5376 5376 1 22651 0 EAIEGTYIDK PRYYKNIGLGFKTPKEAIEGTYIDKKCPFT FKTPKEAIEGTYIDKKCPFTGNVSIRGRIL K E A D K K 1 0 0 1 0 0 2 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 10 0 1137.5554 P62280 P62280 49 58 RPS11 40S ribosomal protein S11 yes yes 2 0.00087807 140.11 By MS/MS 9 0 1 1 2996800 2996800 0 3036 1127 3145 7486 5377 5377 1 1719900 0 EAIEGTYIDKK PRYYKNIGLGFKTPKEAIEGTYIDKKCPFT KTPKEAIEGTYIDKKCPFTGNVSIRGRILS K E A K K C 1 0 0 1 0 0 2 1 0 2 0 2 0 0 0 0 1 0 1 0 0 0 11 1 1265.6503 P62280 P62280 49 59 RPS11 40S ribosomal protein S11 yes yes 2 0.00036633 162.64 By MS/MS 9 0 1 1 5100600 5100600 0 3037 1127 3146 7487 5378 5378 1 2927300 0 EAIESAIGGNAYQHSK EETAFVVDEVSNIVKEAIESAIGGNAYQHS AIESAIGGNAYQHSKVNQWTTNVVEQTLSQ K E A S K V 3 0 1 0 0 1 2 2 1 2 0 1 0 0 0 2 0 0 1 0 0 0 16 0 1673.8009 P63172 P63172 23 38 DYNLT1 Dynein light chain Tctex-type 1 yes yes 2 1.0717E-06 156.36 By MS/MS 10 0 1 1 338930 338930 0 3038 1172 3147 7488 5379 5379 1 360250 0 EAIHSQLLEK NMYEGVGRMFILQSKEAIHSQLLEKQKIAE ILQSKEAIHSQLLEKQKIAEEKIKELEQKK K E A E K Q 1 0 0 0 0 1 2 0 1 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1166.6295 O60925 O60925 74 83 PFDN1 Prefoldin subunit 1 yes yes 2 2.0424E-10 198.61 By MS/MS 10 0 1 1 371060 371060 0 3039 274 3148 7489 5380 5380 1 394400 0 EAILAIHK HDQFKSTLPDADREREAILAIHKEAQRIAE PDADREREAILAIHKEAQRIAESNHIKLSG R E A H K E 2 0 0 0 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 8 0 893.53345 O43707 O43707 585 592 ACTN4 Alpha-actinin-4 yes yes 2 0.0046954 138.24 By MS/MS 4 0 1 1 590690 590690 0 3040 217 3149 7490 5381 5381 1 16125 0 EAINLLEPMTNDPVNYVR AAMALGICCAGTGNKEAINLLEPMTNDPVN NLLEPMTNDPVNYVRQGALIASALIMIQQT K E A V R Q 1 1 3 1 0 0 2 0 0 1 2 0 1 0 2 0 1 0 1 2 0 0 18 0 2087.0357 Q99460 Q99460 667 684 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 3.8357E-25 218.6 By MS/MS 4 0 3 3 3577100 3577100 0 3041 2268 3150;3151 7491;7492;7493 5382;5383;5384 5384 1424 3 97650 0 EAINVEQAFQTIAR CYSKNNIPYFETSAKEAINVEQAFQTIARN KEAINVEQAFQTIARNALKQETEVELYNEF K E A A R N 3 1 1 0 0 2 2 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 14 0 1588.8209 P51149 P51149 158 171 RAB7A Ras-related protein Rab-7a yes yes 2;3 3.9043E-59 295.26 By MS/MS By matching 9.25 0.433 3 1 3 1 2543000 2462800 80227 3042 960 3152 7494;7495;7496;7497 5385;5386;5387 5385 3 1457000 864610 EAKNDSEQFAALLLVTK EGRNPTLERYLGALREAKNDSEQFAALLLV KNDSEQFAALLLVTKAVKAGDIDAKTRRRI R E A T K A 3 0 1 1 0 1 2 0 0 0 3 2 0 1 0 1 1 0 0 1 0 0 17 1 1875.9942 Q9UBB6 Q9UBB6 45 61 NCDN Neurochondrin yes yes 3 0.0060276 83.891 By MS/MS 5 0 1 1 273100 273100 0 3043 2745 3153 7498 5388 5388 1 11225 0 EALCDPTVASR FLQVHASSGHKYSLKEALCDPTVASRLSDT YSLKEALCDPTVASRLSDTKAAGEVKALDD K E A S R L 2 1 0 1 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 11 0 1217.571 Q9BRX2 Q9BRX2 255 265 PELO Protein pelota homolog yes yes 2 8.6437E-05 163.88 By MS/MS 7 0 1 1 2936800 2936800 0 3044 2331 3154 7499 5389 5389 1 52481 0 EALCGCTVNVPTLDGR RDGSDVIYPARISLREALCGCTVNVPTLDG ALCGCTVNVPTLDGRTIPVVFKDVIRPGMR R E A G R T 1 1 1 1 2 0 1 2 0 0 2 0 0 0 1 0 2 0 0 2 0 0 16 0 1760.8186 P25685 P25685 264 279 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 2.7663E-10 186.16 By MS/MS 8 0.816 1 1 1 3 2058900 2058900 0 3045 686 3155 7500;7501;7502 5390 5390 1 90447 0 EALDVLGAVLK MEKVAASPEDIKLCREALDVLGAVLKALTS KLCREALDVLGAVLKALTSADGASEEQSQN R E A L K A 2 0 0 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1126.6598 Q92552 Q92552 278 288 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 4.7552E-07 187.22 By MS/MS 7 0.816 1 1 1 3 30963000 30963000 0 3046 2059 3156 7503;7504;7505 5391;5392;5393 5391 3 568390 0 EALEGILIR DGVFSGDAVQVQEYREALEGILIRGKNGIR QVQEYREALEGILIRGKNGIRLVPELYAVP R E A I R G 1 1 0 0 0 0 2 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5917 P46019 P46019 353 361 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 2 0.0022591 127.02 By MS/MS 3.5 0.5 1 1 2 412230 412230 0 3047 874 3157 7506;7507 5394 5394 1 10806 0 EALEHLCTYEK LLYQNQVLREAGLYREALEHLCTYEKQICD GLYREALEHLCTYEKQICDKLAVEETKGEL R E A E K Q 1 0 0 0 1 0 3 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 11 0 1391.6391 Q9BXJ9 Q9BXJ9 208 218 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 0.0057884 104.42 By MS/MS 4 0 1 1 872000 872000 0 3048 2401 3158 7508 5395 5395 1 23805 0 EALELTDTGLLSGSEER FGRLKDDREKCAKAKEALELTDTGLLSGSE LELTDTGLLSGSEERVQVALEELQDLKGVW K E A E R V 1 1 0 1 0 0 4 2 0 0 4 0 0 0 0 2 2 0 0 0 0 0 17 0 1818.8847 Q14204 Q14204 1302 1318 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.4969E-25 230.06 By MS/MS 2 0.816 1 1 1 3 717090 717090 0 3049 1421 3159 7509;7510;7511 5396;5397 5397 2 33535 0 EALENCITLQDFNR ELKMAEIKVKLIEAKEALENCITLQDFNRA KEALENCITLQDFNRASELKEEIKALEDAR K E A N R A 1 1 2 1 1 1 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 14 0 1721.8043 Q9BPX3 Q9BPX3 504 517 NCAPG Condensin complex subunit 3 yes yes 2 4.6344E-18 269.04 By MS/MS 4.5 0.5 1 1 2 2161700 2161700 0 3050 2302 3160 7512;7513 5398 5398 1 62349 0 EALEPSGENVIQNK YSDIRTGRESSLPSKEALEPSGENVIQNKE KEALEPSGENVIQNKESTG___________ K E A N K E 1 0 2 0 0 1 3 1 0 1 1 1 0 0 1 1 0 0 0 1 0 0 14 0 1526.7577 O75477 O75477 331 344 ERLIN1 Erlin-1 yes yes 2 1.5659E-18 229.68 By MS/MS 7 0 1 1 1467800 1467800 0 3051 312 3161 7514 5399 5399 1 26229 0 EALETERVR ATARLGDPSGRTKEREALETERVRANARAL GRTKEREALETERVRANARALRLGLEALAA R E A V R A 1 2 0 0 0 0 3 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 1 1101.5778 Q9Y2Z4 Q9Y2Z4 130 138 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 0.0035757 153.71 By MS/MS By matching 7.33 0.471 2 1 2 1 6734600 6709500 25158 3052 2909 3162 7515;7516;7517 5400 5400 1 125370 103280 EALFNEFVAAAR AKDSRFKAIEKMKDREALFNEFVAAARKKE KDREALFNEFVAAARKKEKEDSKTRGEKIK R E A A R K 4 1 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 12 0 1336.6776 O14776 O14776 770 781 TCERG1 Transcription elongation regulator 1 yes yes 2 5.627E-56 290.51 By MS/MS 3 0 1 1 340660 340660 0 3053 127 3163 7518 5401 5401 1 8893.1 0 EALGQAGVSETDNSSQDALGLSK LFGKKEKGRPGQTGKEALGQAGVSETDNSS SETDNSSQDALGLSKLGGQAEKNRKLQKKH K E A S K L 3 0 1 2 0 2 2 3 0 0 3 1 0 0 0 4 1 0 0 1 0 0 23 0 2276.0768 Q13136 Q13136 825 847 PPFIA1 Liprin-alpha-1 yes yes 2 2.9854E-30 258.92 By MS/MS 3 0 1 1 682680 682680 0 3054 1338 3164 7519 5402 5402 1 17821 0 EALIAASETLKER LSRHNTAVSQLTKAKEALIAASETLKERKA AKEALIAASETLKERKAAIRDIEGKLPQTE K E A E R K 3 1 0 0 0 0 3 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 1 1429.7777 Q9NTJ3 Q9NTJ3 525 537 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.047527 100.09 By MS/MS 3 0 1 1 1167700 1167700 0 3055 2630 3165 7520 5403 5403 1 30483 0 EALLGDTGTGDFLK WDDSHLDSAGREGDREALLGDTGTGDFLKA REALLGDTGTGDFLKAPQSFRAELSSILLL R E A L K A 1 0 0 2 0 0 1 3 0 0 3 1 0 1 0 0 2 0 0 0 0 0 14 0 1435.7195 O00400 O00400 50 63 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 5.6318E-18 220.5 By MS/MS 2 0.816 1 1 1 3 601340 601340 0 3056 90 3166 7521;7522;7523 5404 5404 1 22073 0 EALLGVQEDVDEYVK ELHYPLGERRSDYDREALLGVQEDVDEYVK EALLGVQEDVDEYVKLGHEEQQKRLQAIIK R E A V K L 1 0 0 2 0 1 3 1 0 0 2 1 0 0 0 0 0 0 1 3 0 0 15 0 1705.841 Q14257 Q14257 42 56 RCN2 Reticulocalbin-2 yes yes 2 3.2657E-63 301.35 By MS/MS 7.4 1.85 1 1 1 1 1 5 18030000 18030000 0 3057 1426 3167 7524;7525;7526;7527;7528 5405;5406 5405 2 285180 0 EALLSSAVDHGSDEVK QTIIAGWREATKAAREALLSSAVDHGSDEV ALLSSAVDHGSDEVKFRQDLMNIAGTTLSS R E A V K F 2 0 0 2 0 0 2 1 1 0 2 1 0 0 0 3 0 0 0 2 0 0 16 0 1655.8002 P78371 P78371 139 154 CCT2 T-complex protein 1 subunit beta yes yes 2;3 5.802E-16 273.24 By MS/MS 7.44 1.34 3 2 2 1 1 9 214080000 214080000 0 3058 1195 3168 7529;7530;7531;7532;7533;7534;7535;7536;7537 5407;5408;5409;5410 5407 4 2205300 0 EALLSSAVDHGSDEVKFR QTIIAGWREATKAAREALLSSAVDHGSDEV LSSAVDHGSDEVKFRQDLMNIAGTTLSSKL R E A F R Q 2 1 0 2 0 0 2 1 1 0 2 1 0 1 0 3 0 0 0 2 0 0 18 1 1958.9698 P78371 P78371 139 156 CCT2 T-complex protein 1 subunit beta yes yes 2;3 9.9576E-156 402.3 By MS/MS 6 0 2 2 78513000 78513000 0 3059 1195 3169 7538;7539 5411;5412 5412 2 612250 0 EALQLMATYLPK TATASLGVIHKGHEKEALQLMATYLPKDTS HEKEALQLMATYLPKDTSPGSAYQEGGGLY K E A P K D 2 0 0 0 0 1 1 0 0 0 3 1 1 0 1 0 1 0 1 0 0 0 12 0 1376.7374 Q99460 Q99460 418 429 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 1.7106E-05 205.13 By MS/MS 4 0 2 2 1897200 1897200 0 3060 2268 3170;3171 7540;7541 5413;5414 5414 1425 2 51791 0 EALQPLINR KEYQRELERNYHRLKEALQPLINRKIPQLY NYHRLKEALQPLINRKIPQLYKAVLPVTCH K E A N R K 1 1 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 9 0 1052.5978 Q96N67 Q96N67 2103 2111 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0019573 130.27 By MS/MS 3.5 1.12 1 1 1 1 4 1188500 1188500 0 3061 2230 3172 7542;7543;7544;7545 5415 5415 1 45637 0 EALQSDWLPFELLASGGQK FYARERLGAVYGFVREALQSDWLPFELLAS SDWLPFELLASGGQKLSEDENLALNECGLV R E A Q K L 2 0 0 1 0 2 2 2 0 0 4 1 0 1 1 2 0 1 0 0 0 0 19 0 2088.0528 Q9BZV1 Q9BZV1 368 386 UBXN6 UBX domain-containing protein 6 yes yes 2 1.9698E-07 183.06 By MS/MS 6 0 1 1 455510 455510 0 3062 2427 3173 7546 5416 5416 1 3552.1 0 EALSTATVQAAER FMSLLNFLNNFQTAKEALSTATVQAAERAA AKEALSTATVQAAERAASSMKDLAQKSFRL K E A E R A 4 1 0 0 0 1 2 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 13 0 1345.6838 Q709C8 Q709C8 1727 1739 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.00075555 134.38 By MS/MS 1 0 1 1 189380 189380 0 3063 1749 3174 7547 5417 5417 1 9252.5 0 EAMDPIAELLSQLSGVR GGLSSSQSSYSPSNREAMDPIAELLSQLSG MDPIAELLSQLSGVRRSAGGQLNSSGPSAS R E A V R R 2 1 0 1 0 1 2 1 0 1 3 0 1 0 1 2 0 0 0 1 0 0 17 0 1827.94 Q9P0J7 Q9P0J7 194 210 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 2 0.001946 112.44 By MS/MS 6 0 1 1 50325 50325 0 3064 2727 3175 7548 5418;5419;5420 5419 1590 3 392.43 0 EANDALNAYVCK CMSIVTSMTAGVSEREANDALNAYVCKGLP SEREANDALNAYVCKGLPQHEEICLGLFTL R E A C K G 3 0 2 1 1 0 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 12 0 1366.6187 Q68E01 Q68E01 70 81 INTS3 Integrator complex subunit 3 yes yes 2 5.3777E-24 242.97 By MS/MS 4 0 1 1 768580 768580 0 3065 1674 3176 7549 5421 5421 1 20981 0 EANEDESGFTCCAFSAR RHLIFSRFRPISVFREANEDESGFTCCAFS NEDESGFTCCAFSARERFLMLGTCTGQLKL R E A A R E 3 1 1 1 2 0 3 1 0 0 0 0 0 2 0 2 1 0 0 0 0 0 17 0 1949.752 Q9Y4B6 Q9Y4B6 1088 1104 VPRBP Protein VPRBP yes yes 2 3.8435E-83 322.18 By MS/MS 3 0 1 1 959090 959090 0 3066 2950 3177 7550 5422 5422 1 25037 0 EANEILQR KREDLVVAPAGITLKEANEILQRSKKGKLP PAGITLKEANEILQRSKKGKLPIVNEDDEL K E A Q R S 1 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 971.50361 P12268;P20839 P12268 196 203 IMPDH2;IMPDH1 Inosine-5-monophosphate dehydrogenase 2;Inosine-5-monophosphate dehydrogenase 1 no no 2 2.164E-05 205.58 By MS/MS By MS/MS 7.2 1.17 2 1 1 1 4 1 20768000 20654000 113960 3067 564;646 3178 7551;7552;7553;7554;7555 5423;5424;5425 5424 3 283490 349510 EANIQAVDSEVGLTK ILQTVDLVSQETGEKEANIQAVDSEVGLTK EANIQAVDSEVGLTKEDTQEKLGEDDKTQK K E A T K E 2 0 1 1 0 1 2 1 0 1 1 1 0 0 0 1 1 0 0 2 0 0 15 0 1572.7995 Q9H2G2 Q9H2G2 510 524 SLK STE20-like serine/threonine-protein kinase yes yes 2 7.4501E-50 279.56 By MS/MS 2 0 1 1 288230 288230 0 3068 2476 3179 7556 5426 5426 1 14327 0 EANLAASFGK ARVCHAHPTLSEAFREANLAASFGKSINF_ SEAFREANLAASFGKSINF___________ R E A G K S 3 0 1 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1006.5084 P09622 P09622 496 505 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 0.0037542 128.03 By MS/MS By matching 6.75 0.829 2 1 1 3 1 7826500 7763000 63504 3069 518 3180 7557;7558;7559;7560 5427 5427 1 77896 194760 EANLLNAVIVQR TFPNKELADESQTLKEANLLNAVIVQRLT_ TLKEANLLNAVIVQRLT_____________ K E A Q R L 2 1 2 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1338.7619 Q9UNZ2 Q9UNZ2 357 368 NSFL1C NSFL1 cofactor p47 yes yes 2 2.098E-11 210.08 By MS/MS 7 0 1 1 1136700 1136700 0 3070 2849 3181 7561 5428 5428 1 20313 0 EANQAINPK PNNIKQVSDLISVLREANQAINPKLLQLVE LISVLREANQAINPKLLQLVEDRGSGRSRG R E A P K L 2 0 2 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 9 0 983.50361 P17844 P17844 462 470 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.0059227 113.71 By MS/MS 5 0 1 1 1634300 1634300 0 3071 616 3182 7562 5429 5429 1 67177 0 EANSIIITPGYGLCAAK THTEINLDNAIDMIREANSIIITPGYGLCA NSIIITPGYGLCAAKAQYPIADLVKMLTEQ R E A A K A 3 0 1 0 1 0 1 2 0 3 1 1 0 0 1 1 1 0 1 0 0 0 17 0 1776.908 Q13423 Q13423 923 939 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 1.9371E-18 202.32 By MS/MS 2 0.816 1 1 1 3 860040 860040 0 3072 1367 3183 7563;7564;7565 5430 5430 1 37659 0 EAPATQASSTTQLTDTQVLAAENK GVSKATEVSKTPEAREAPATQASSTTQLTD TTQLTDTQVLAAENKSLAADTKKQNADPQA R E A N K S 5 0 1 1 0 3 2 0 0 0 2 1 0 0 1 2 5 0 0 1 0 0 24 0 2474.2136 Q9UNF1 Q9UNF1 77 100 MAGED2 Melanoma-associated antigen D2 yes yes 2;3 6.9666E-08 157.11 By MS/MS 5.33 0.471 2 1 3 6907000 6907000 0 3073 2840 3184 7566;7567;7568 5431;5432 5432 2 270970 0 EAPCVLIYIPDGHTK ICDQPYEPVSPYSCKEAPCVLIYIPDGHTK EAPCVLIYIPDGHTKEMPTSGSKEKTKVEA K E A T K E 1 0 0 1 1 0 1 1 1 2 1 1 0 0 2 0 1 0 1 1 0 0 15 0 1711.8603 P07814 P07814 694 708 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0002169 132.79 By MS/MS 3.5 0.5 1 1 2 1499800 1499800 0 3074 493 3185 7569;7570 5433 5433 1 39433 0 EAPETDTSPSLWDVEFAK TGKRLNIFDMMAVTKEAPETDTSPSLWDVE ETDTSPSLWDVEFAKQLATVNEQPLQNGFE K E A A K Q 2 0 0 2 0 0 3 0 0 0 1 1 0 1 2 2 2 1 0 1 0 0 18 0 2020.9266 Q92665 Q92665 267 284 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 7.9799E-11 167.73 By MS/MS 8 0.816 1 1 1 3 9952000 9952000 0 3075 2073 3186 7571;7572;7573 5434;5435 5434 2 220270 0 EAPGPAGGGGGGSR ______________________________ REAPGPAGGGGGGSRWAESGSGTSPESGDE R E A S R W 2 1 0 0 0 0 1 7 0 0 0 0 0 0 2 1 0 0 0 0 0 0 14 0 1125.5163 Q9BQ61 Q9BQ61 14 27 C19orf43 Uncharacterized protein C19orf43 yes yes 2 0.0065366 100.04 By MS/MS 9 0 1 1 422310 422310 0 3076 2306 3187 7574 5436 5436 1 242370 0 EAPVDVLTQIGR AQSRRDFAPPGQQKREAPVDVLTQIGRSVR QKREAPVDVLTQIGRSVRGTLDAWIGPETM R E A G R S 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 12 0 1296.7038 Q9BVC6 Q9BVC6 48 59 TMEM109 Transmembrane protein 109 yes yes 2 8.3302E-11 197.21 By MS/MS 9.5 0.5 1 1 2 10463000 10463000 0 3077 2376 3188 7575;7576 5437;5438 5437 2 6020800 0 EAPWPSAQSEIR TANHRALQIPEVYLREAPWPSAQSEIRTIS YLREAPWPSAQSEIRTISAYKTPRDKVQCI R E A I R T 2 1 0 0 0 1 2 0 0 1 0 0 0 0 2 2 0 1 0 0 0 0 12 0 1369.6626 Q14C86 Q14C86 1371 1382 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0073375 99.973 By MS/MS 2 0 1 1 295460 295460 0 3078 1455 3189 7577 5439 5439 1 14686 0 EAQDTSDGIIQK SPANQRRHLLGFSAKEAQDTSDGIIQKNSY SAKEAQDTSDGIIQKNSYRYDHSVSNDKAL K E A Q K N 1 0 0 2 0 2 1 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 12 0 1303.6256 P18850 P18850 425 436 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 8.0904E-13 201.09 By MS/MS 4 0 1 1 0 0 0 3079 626 3190 7578 5440 5440 1 0 0 EAQELSLEK YRVSMLKMDESTLLREAQELSLEKLQQAVR ESTLLREAQELSLEKLQQAVRQNGLMSGLM R E A E K L 1 0 0 0 0 1 3 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1045.5292 Q9H4I3 Q9H4I3 125 133 TRABD TraB domain-containing protein yes yes 2 0.015967 99.013 By MS/MS 7 0 1 1 2017300 2017300 0 3080 2500 3191 7579 5441 5441 1 36050 0 EAQKEGWSK TCGGDLKQAEIWLHKEAQKEGWSKAAKLQG EIWLHKEAQKEGWSKAAKLQGRKTKEGLIG K E A S K A 1 0 0 0 0 1 2 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 9 1 1061.5142 P43897 P43897 85 93 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.015754 128.38 By MS/MS 8 0 1 1 2018400 2018400 0 3081 868 3192 7580 5442 5442 1 133150 0 EAQKFALAR SPAGARLRASLTLSREAQKFALAREVVYLE SLTLSREAQKFALAREVVYLESSTTAVHAL R E A A R E 3 1 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 1 1032.5716 Q53S58 Q53S58 148 156 TMEM177 Transmembrane protein 177 yes yes 2 0.016386 127.46 By MS/MS 8 0 1 1 375110 375110 0 3082 1591 3193 7581 5443 5443 1 24746 0 EAQLQSR DTLSPEERRARLRKREAQLQSRKEYEQELS RRARLRKREAQLQSRKEYEQELSDDLHVER R E A S R K 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 830.42463 Q7Z7F7 Q7Z7F7 97 103 MRPL55 39S ribosomal protein L55, mitochondrial yes yes 2 0.018801 129.68 By MS/MS By matching 10 0 2 1 1 280590 250000 30582 3083 1807 3194 7582;7583 5444 5444 1 265730 784410 EAQNLSAMEIR HGLPIEIKVLSELGREAQNLSAMEIRKKAR ELGREAQNLSAMEIRKKARSFAKAAIEKQK R E A I R K 2 1 1 0 0 1 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 11 0 1260.6132 Q9NSE4 Q9NSE4 171 181 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 1.3943E-16 229.53 By MS/MS 3.5 0.957 1 2 2 1 6 11973000 11973000 0 3084 2624 3195;3196 7584;7585;7586;7587;7588;7589 5445;5446 5446 1551 2 336480 0 EAQQVYGGK VTEFGNKYWLMLNEKEAQQVYGGKEARTEE LMLNEKEAQQVYGGKEARTEEMKWRQWADD K E A G K E 1 0 0 0 0 2 1 2 0 0 0 1 0 0 0 0 0 0 1 1 0 0 9 0 978.47706 Q9H7Z7 Q9H7Z7 217 225 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 2 0.02429 98.458 By MS/MS 8 0 1 1 540150 540150 0 3085 2519 3197 7590 5447 5447 1 35634 0 EAQQYSEALASTR KHGVPPLKLCKNLNREAQQYSEALASTRIL NREAQQYSEALASTRILKHSPESSRGQCGE R E A T R I 3 1 0 0 0 2 2 0 0 0 1 0 0 0 0 2 1 0 1 0 0 0 13 0 1452.6845 Q9H4G4 Q9H4G4 38 50 GLIPR2 Golgi-associated plant pathogenesis-related protein 1 yes yes 2 3.4245E-06 190.66 By MS/MS 10 0 1 1 262770 262770 0 3086 2499 3198 7591 5448 5448 1 279300 0 EAQVYQAFK GGKPANFLDLGGGVKEAQVYQAFKLLTADP LGGGVKEAQVYQAFKLLTADPKVEAILVNI K E A F K L 2 0 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 9 0 1082.5397 Q96I99 Q96I99 339 347 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.003615 118.74 By MS/MS 7 0 1 1 2197500 2197500 0 3087 2200 3199 7592 5449 5449 1 39270 0 EAREDLEVHQAK TEAEKVFMVARGLVREAREDLEVHQAKLKE LVREAREDLEVHQAKLKEVRDRLDRVSRED R E A A K L 2 1 0 1 0 1 3 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 12 1 1423.7056 Q96ER9 Q96ER9 118 129 CCDC51 Coiled-coil domain-containing protein 51 yes yes 3 0.00013885 133.05 By MS/MS 7 0 1 1 793310 793310 0 3088 2166 3200 7593 5450 5450 1 14177 0 EASADLSPYVR IRVPIIVPIMMLAIKEASADLSPYVRKNAA LAIKEASADLSPYVRKNAAHAIQKLYSLDP K E A V R K 2 1 0 1 0 0 1 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1206.5881 O00203 O00203 157 167 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0017952 148.94 By MS/MS 4.5 0.5 1 1 2 1387300 1387300 0 3089 77 3201 7594;7595 5451 5451 1 40974 0 EASDIILTDDNFTSIVK DVGFAMGIAGTDVAKEASDIILTDDNFTSI SDIILTDDNFTSIVKAVMWGRNVYDSISKF K E A V K A 1 0 1 3 0 0 1 0 0 3 1 1 0 1 0 2 2 0 0 1 0 0 17 0 1879.9415 P20020;P23634;Q16720 P20020 824 840 ATP2B1;ATP2B4;ATP2B3 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 4;Plasma membrane calcium-transporting ATPase 3 yes no 2 0.030472 73.273 By MS/MS 2.5 0.5 1 1 2 365330 365330 0 3090 637 3202 7596;7597 5452 5452 1 14928 0 EASDTGQPIVFSQPESDEAK GLEVLGDIPLHLNIREASDTGQPIVFSQPE GQPIVFSQPESDEAKAYLRIAVEVVRRLPS R E A A K A 2 0 0 2 0 2 3 1 0 1 0 1 0 1 2 3 1 0 0 1 0 0 20 0 2133.9702 Q8TB37 Q8TB37 282 301 NUBPL Iron-sulfur protein NUBPL yes yes 2 2.754E-12 162.88 By MS/MS 8 0 1 1 4267900 4267900 0 3091 1987 3203 7598 5453 5453 1 281550 0 EASDTGQPIVFSQPESDEAKAYLR GLEVLGDIPLHLNIREASDTGQPIVFSQPE VFSQPESDEAKAYLRIAVEVVRRLPSPSE_ R E A L R I 3 1 0 2 0 2 3 1 0 1 1 1 0 1 2 3 1 0 1 1 0 0 24 1 2637.2558 Q8TB37 Q8TB37 282 305 NUBPL Iron-sulfur protein NUBPL yes yes 3 0.00041666 80.382 By MS/MS 8 0 1 1 2410900 2410900 0 3092 1987 3204 7599 5454 5454 1 159040 0 EASGEAEAEAEEADSGPVPGGERPAGEGQGEPTSRPK RQRLGKSAFLQVQPREASGEAEAEAEEADS RPAGEGQGEPTSRPKAVTFSPDLGPVPHEG R E A P K A 6 2 0 1 0 1 9 7 0 0 0 1 0 0 5 3 1 0 0 1 0 0 37 2 3634.6255 Q9P1Y5 Q9P1Y5 644 680 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 4 0.032613 35.769 By MS/MS By matching 3 0 2 1 1 724660 654880 69781 3093 2733 3205 7600;7601 5455 5455 1 17096 100010 EASGETTGVDITK GNEVDSQSSIRTEAKEASGETTGVDITKIQ AKEASGETTGVDITKIQVKRCETMREKHMQ K E A T K I 1 0 0 1 0 0 2 2 0 1 0 1 0 0 0 1 3 0 0 1 0 0 13 0 1306.6252 O75152 O75152 541 553 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 2 0.0034942 111.63 By MS/MS 3.5 0.5 1 1 2 1301500 1301500 0 3094 284 3206 7602;7603 5456 5456 1 34523 0 EASIDILHSIVK VVEFQRAQSLLSTDREASIDILHSIVKRDI TDREASIDILHSIVKRDIQENDEEAVQVKE R E A V K R 1 0 0 1 0 0 1 0 1 3 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1323.7398 O00231 O00231 21 32 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.0015804 126.71 By MS/MS 7 0 1 1 344130 344130 0 3095 80 3207 7604 5457 5457 1 6149.6 0 EASKQADVNLVNAK AGNCLSPAVIVGLLKEASKQADVNLVNAKL KEASKQADVNLVNAKLLVKEAGLNVTTSHS K E A A K L 3 0 2 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 0 2 0 0 14 1 1485.7787 O43175 O43175 381 394 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 6.1296E-17 248.21 By MS/MS 6.33 0.471 2 1 3 9244100 9244100 0 3096 185 3208 7605;7606;7607 5458;5459 5458 2 74603 0 EATADDLIK VVANLQYDDGSGMKREATADDLIKVVEELT GSGMKREATADDLIKVVEELTRIH______ R E A I K V 2 0 0 2 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 0 974.49204 Q16531 Q16531 1123 1131 DDB1 DNA damage-binding protein 1 yes yes 2 0.055746 80.438 By MS/MS 1 0 1 1 188830 188830 0 3097 1537 3209 7608 5460 5460 1 9225.7 0 EATAGNPGGQTVR SDMELLFDIFLETVKEATAGNPGGQTVRER VKEATAGNPGGQTVRERLTERLCPPGIPTP K E A V R E 2 1 1 0 0 1 1 3 0 0 0 0 0 0 1 0 2 0 0 1 0 0 13 0 1256.6109 P27708 P27708 359 371 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 9.338E-05 155.47 By MS/MS 3 1.41 1 1 1 1 1 5 4727600 4727600 0 3098 709 3210 7609;7610;7611;7612;7613 5461;5462;5463;5464 5461 4 217930 0 EATLTIAQYR EAYLNQHLSGFGAEREATLTIAQYRAGKSN FGAEREATLTIAQYRAGKSNPTFYLQKGFQ R E A Y R A 2 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 10 0 1164.6139 Q709F0 Q709F0 41 50 ACAD11 Acyl-CoA dehydrogenase family member 11 yes yes 2 1.7001E-09 195.05 By MS/MS 5 0 1 1 0 0 0 3099 1750 3211 7614 5465 5465 1 0 0 EATPAENVAK EVQLDVNLKPLPFNREATPAENVAKLRLEH LPFNREATPAENVAKLRLEHVGVSLTDDLM R E A A K L 3 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 10 0 1028.5138 Q7L8L6 Q7L8L6 606 615 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.024582 85.862 By MS/MS 5 0 1 1 3046700 3046700 0 3100 1770 3212 7615 5466 5466 1 125230 0 EATPVVHETEPESGSQPR EEPVFTRQDSNRSEKEATPVVHETEPESGS PVVHETEPESGSQPRPAVLSGYFKQFQKSL K E A P R P 1 1 0 0 0 1 4 1 1 0 0 0 0 0 3 2 2 0 0 2 0 0 18 0 1948.9126 Q9Y520 Q9Y520 639 656 PRRC2C Protein PRRC2C yes yes 3 0.050872 56.215 By MS/MS 1.5 0.5 1 1 2 312090 312090 0 3101 2963 3213 7616;7617 5467 5467 1 15333 0 EATTEFSVDAR VQCYGPGIEGQGVFREATTEFSVDARALTQ GVFREATTEFSVDARALTQTGGPHVKARVA R E A A R A 2 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 11 0 1224.5622 P21333 P21333 1273 1283 FLNA Filamin-A yes yes 2 0.00057343 167.93 By MS/MS 2.5 0.5 1 1 2 4209000 4209000 0 3102 648 3214 7618;7619 5468;5469 5468 2 184570 0 EATVQEVDVIPEDGAADVR LRVRLAGAQLSWLYKEATVQEVDVIPEDGA QEVDVIPEDGAADVRVIISNSAYGKFRKLF K E A V R V 3 1 0 3 0 1 3 1 0 1 0 0 0 0 1 0 1 0 0 4 0 0 19 0 2011.9698 O43824 O43824 481 499 GTPBP6 Putative GTP-binding protein 6 yes yes 2 2.1059E-19 204.52 By MS/MS 7 0.816 1 1 1 3 9700900 9700900 0 3103 228 3215 7620;7621;7622 5470 5470 1 115920 0 EATWTMSNITAGR VFPSLLTNPKTNIQKEATWTMSNITAGRQD QKEATWTMSNITAGRQDQIQQVVNHGLVPF K E A G R Q 2 1 1 0 0 0 1 1 0 1 0 0 1 0 0 1 3 1 0 0 0 0 13 0 1436.6718 P52292 P52292 354 366 KPNA2 Importin subunit alpha-1 yes yes 2 2.7225E-25 240 By MS/MS 6 0 1 1 4397500 4397500 0 3104 983 3216 7623 5471 5471 1 34292 0 EAVAMESYAK MAHAVTQLANRTPGKEAVAMESYAKALRML RTPGKEAVAMESYAKALRMLPTIIADNAGY K E A A K A 3 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 10 0 1097.5063 P78371 P78371 432 441 CCT2 T-complex protein 1 subunit beta yes yes 2 4.1713E-05 172.23 By MS/MS By matching 6.6 0.8 3 1 1 4 1 31226000 31203000 23144 3105 1195 3217;3218 7624;7625;7626;7627;7628 5472;5473 5473 944 2 250510 70982 EAVAPVQEESDLEK RKEEERKKKETDQKKEAVAPVQEESDLEKK KEAVAPVQEESDLEKKRREAEALLQSMGLT K E A E K K 2 0 0 1 0 1 4 0 0 0 1 1 0 0 1 1 0 0 0 2 0 0 14 0 1542.7413 Q13409 Q13409 42 55 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 0.00096511 124.12 By MS/MS By matching 5.33 0.471 2 1 2 1 2826700 2803200 23517 3106 1365 3219 7629;7630;7631 5474 5474 1 97106 69587 EAVCIVLSDDTCSDEK LFRGDTVLLKGKKRREAVCIVLSDDTCSDE AVCIVLSDDTCSDEKIRMNRVVRNNLRVRL R E A E K I 1 0 0 3 2 0 2 0 0 1 1 1 0 0 0 2 1 0 0 2 0 0 16 0 1839.7866 P55072 P55072 66 81 VCP Transitional endoplasmic reticulum ATPase yes yes 2 9.6466E-22 231.67 By MS/MS 4 0 1 1 1705800 1705800 0 3107 1026 3220 7632 5475 5475 1 46567 0 EAVEAIQNSTSIK KLPENYTDETWQKLKEAVEAIQNSTSIKYN LKEAVEAIQNSTSIKYNLEELYQAVENLCS K E A I K Y 2 0 1 0 0 1 2 0 0 2 0 1 0 0 0 2 1 0 0 1 0 0 13 0 1388.7147 Q13620 Q13620 222 234 CUL4B Cullin-4B yes yes 2 2.7559E-26 276.17 By MS/MS 4 0 1 1 1200300 1200300 0 3108 1390 3221 7633 5476 5476 1 32767 0 EAVELPLTHFELYK YADIGGMDIQKQEVREAVELPLTHFELYKQ REAVELPLTHFELYKQIGIDPPRGVLMYGP R E A Y K Q 1 0 0 0 0 0 3 0 1 0 3 1 0 1 1 0 1 0 1 1 0 0 14 0 1687.8821 P43686 P43686 179 192 PSMC4 26S protease regulatory subunit 6B yes yes 2 5.6618E-09 194.48 By MS/MS 6 0 1 1 4483800 4483800 0 3109 867 3222 7634 5477 5477 1 34965 0 EAVGDLLDAFK SVPKRRRKIKELNKKEAVGDLLDAFKEANP LNKKEAVGDLLDAFKEANPAVPEVENQPPA K E A F K E 2 0 0 2 0 0 1 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1176.6027 Q04637 Q04637 525 535 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 1;2 6.902E-07 183.43 By MS/MS 3 1.22 1 2 2 2 1 8 13902000 13902000 0 3110 1264 3223 7635;7636;7637;7638;7639;7640;7641;7642 5478;5479;5480;5481;5482;5483 5483 5 530950 0 EAVGGQAEDHLK EMQQRVIKKSKDMAKEAVGGQAEDHLKLKD MAKEAVGGQAEDHLKLKDGQQQNETKKKKG K E A L K L 2 0 0 1 0 1 2 2 1 0 1 1 0 0 0 0 0 0 0 1 0 0 12 0 1252.6048 Q8IWC1 Q8IWC1 640 651 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 8.4511E-05 158.47 By MS/MS 3 0 1 1 364280 364280 0 3111 1864 3224 7643 5484 5484 1 9509.6 0 EAVKEESIKR EPKGKEHDDIFDKLKEAVKEESIKRHKWND FDKLKEAVKEESIKRHKWNDFAEDSLRVIQ K E A K R H 1 1 0 0 0 0 3 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 10 2 1187.651 O60313 O60313 702 711 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 3 0.01717 104.42 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 2182300 2154600 27653 3112 244 3225 7644;7645;7646;7647;7648 5485 5485 1 48857 57783 EAVLIDPVLETAPR VSCTFTYLLGDRESREAVLIDPVLETAPRD REAVLIDPVLETAPRDAQLIKELGLRLLYA R E A P R D 2 1 0 1 0 0 2 0 0 1 2 0 0 0 2 0 1 0 0 2 0 0 14 0 1521.8403 O95571 O95571 47 60 ETHE1 Persulfide dioxygenase ETHE1, mitochondrial yes yes 2 0.0044595 128.01 By MS/MS 9 0.816 1 1 1 3 731730 731730 0 3113 399 3226 7649;7650;7651 5486 5486 1 146810 0 EAVLLNLK IKSEEAKRQQLGIEKEAVLLNLKSNQELSE QQLGIEKEAVLLNLKSNQELSEQGTSFSQT K E A L K S 1 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 8 0 898.54877 Q9H9J2 Q9H9J2 113 120 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.043217 94.006 By MS/MS 8 0 1 1 3660800 3660800 0 3114 2535 3227 7652 5487 5487 1 241500 0 EAVLNAYR RRMLPLIWSKEPGVREAVLNAYRQLYLNPK SKEPGVREAVLNAYRQLYLNPKGDSARAKA R E A Y R Q 2 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 934.48723 Q15021 Q15021 691 698 NCAPD2 Condensin complex subunit 1 yes yes 2 0.0010493 172.03 By MS/MS 3.5 0.5 1 1 2 3158800 3158800 0 3115 1464 3228 7653;7654 5488;5489 5488 2 83277 0 EAVLSCSQALK WYHLAEAQVKMHRPKEAVLSCSQALKIVDN HRPKEAVLSCSQALKIVDNLGASGNSLYQR K E A L K I 2 0 0 0 1 1 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 11 0 1204.6122 Q6PGP7 Q6PGP7 324 334 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 1.6137E-10 196.52 By MS/MS 3.5 0.5 1 1 2 1611800 1611800 0 3116 1714 3229 7655;7656 5490 5490 1 42202 0 EAVLSLYR ______________________________ ______________________________ R E A Y R A 1 1 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 8 0 949.52328 L0R8F8 L0R8F8 7 14 SMCR7L yes yes 2 0.009351 132.08 By MS/MS 10 0 1 1 2157400 2157400 0 3117 66 3230 7657 5491 5491 1 2293100 0 EAVQLVNTR LHLLTQEALSIHGVKEAVQLVNTREEVEDL SIHGVKEAVQLVNTREEVEDLCRLDKMIDL K E A T R E 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 9 0 1028.5615 P54886 P54886 531 539 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 2.0867E-08 209.21 By MS/MS By MS/MS 3.71 1.67 1 1 1 1 2 1 6 1 15489000 15388000 101210 3118 1019 3231 7658;7659;7660;7661;7662;7663;7664 5492;5493 5493 2 481680 299490 EAVQLVNTREEVEDLCR LHLLTQEALSIHGVKEAVQLVNTREEVEDL VQLVNTREEVEDLCRLDKMIDLIIPRGSSQ K E A C R L 1 2 1 1 1 1 4 0 0 0 2 0 0 0 0 0 1 0 0 3 0 0 17 1 2059.0004 P54886 P54886 531 547 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 1.542E-17 201.38 By MS/MS 5 0.707 1 2 1 4 16798000 16798000 0 3119 1019 3232 7665;7666;7667;7668 5494;5495 5495 2 547640 0 EAVTEILGIEPDR AAFVVYLETETLVTREAVTEILGIEPDREK TREAVTEILGIEPDREKGFHLDVEDYLSGV R E A D R E 1 1 0 1 0 0 3 1 0 2 1 0 0 0 1 0 1 0 0 1 0 0 13 0 1440.746 Q15631 Q15631 117 129 TSN Translin yes yes 2 0.0014276 152.7 By MS/MS 8.5 0.5 1 1 2 315000 315000 0 3120 1510 3233 7669;7670 5496 5496 1 92886 0 EAVTFDQANPTQILGK RSAASKTMNIYFPKKEAVTFDQANPTQILG AVTFDQANPTQILGKLKELNGTAPEEKKLT K E A G K L 2 0 1 1 0 2 1 1 0 1 1 1 0 1 1 0 2 0 0 1 0 0 16 0 1730.8839 Q9Y263 Q9Y263 539 554 PLAA Phospholipase A-2-activating protein yes yes 2 4.6381E-06 149.23 By MS/MS 2.5 1.12 1 1 1 1 4 512200 512200 0 3121 2869 3234 7671;7672;7673;7674 5497 5497 1 19840 0 EAVTHIGR KGDKIAIWTTECENREAVTHIGRVYKERLG TTECENREAVTHIGRVYKERLGLPPKIVIG R E A G R V 1 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 8 0 881.47191 P06730 P06730 174 181 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 0.0026201 161.68 By MS/MS 9 0 1 1 0 0 0 3122 481 3235 7675 5498 5498 1 0 0 EAYEAGLIGK GEFYNEASNLQVAIREAYEAGLIGKNACGS QVAIREAYEAGLIGKNACGSGYDFDVFVVR R E A G K N 2 0 0 0 0 0 2 2 0 1 1 1 0 0 0 0 0 0 1 0 0 0 10 0 1049.5393 P49821 P49821 175 184 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.0061899 103.56 By MS/MS 6.5 0.5 1 1 2 6619200 6619200 0 3123 936 3236 7676;7677 5499 5499 1 62011 0 EAYGAVTQTVR LVSDTRRVSDIQWFREAYGAVTQTVRVVAL QWFREAYGAVTQTVRVVALEQSRQQRGWVF R E A V R V 2 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 2 0 1 2 0 0 11 0 1193.6041 Q15126 Q15126 120 130 PMVK Phosphomevalonate kinase yes yes 2 8.3266E-11 205.18 By MS/MS 9.5 0.5 1 1 2 752040 752040 0 3124 1483 3237 7678;7679 5500 5500 1 501860 0 EAYMGNVLQGGEGQAPTR QGAIEKAGIPKEEVKEAYMGNVLQGGEGQA MGNVLQGGEGQAPTRQAVLGAGLPISTPCT K E A T R Q 2 1 1 0 0 2 2 4 0 0 1 0 1 0 1 0 1 0 1 1 0 0 18 0 1876.8738 P24752 P24752 88 105 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 2.7683E-55 275.76 By MS/MS By MS/MS 7.2 0.4 4 1 3 2 14595000 14434000 161070 3125 680 3238;3239 7680;7681;7682;7683;7684 5501;5502;5503;5504 5504 454 4 267910 661240 EAYPEEAYIADLDAK KVKWGDIEFPPPFGREAYPEEAYIADLDAK EAYPEEAYIADLDAKSGASLKLTLLNPKGR R E A A K S 4 0 0 2 0 0 3 0 0 1 1 1 0 0 1 0 0 0 2 0 0 0 15 0 1696.7832 P53396 P53396 245 259 ACLY ATP-citrate synthase yes yes 2;3 5.7731E-21 228.93 By MS/MS 3.89 1.79 1 1 2 2 1 1 1 9 23415000 23415000 0 3126 1001 3240 7685;7686;7687;7688;7689;7690;7691;7692;7693 5505;5506;5507;5508;5509;5510 5509 6 622850 0 EAYPGDVFYLHSR AYRQMSLLLRRPPGREAYPGDVFYLHSRLL GREAYPGDVFYLHSRLLERAAKMNDAFGGG R E A S R L 1 1 0 1 0 0 1 1 1 0 1 0 0 1 1 1 0 0 2 1 0 0 13 0 1552.731 P25705 P25705 335 347 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 1.9597E-05 169.65 By MS/MS 7 1.41 1 1 1 1 1 5 54833000 54833000 0 3127 687 3241 7694;7695;7696;7697;7698 5511;5512;5513;5514 5511 4 548560 0 EAYTAVVYHNR MPVIFGKSSCSEFSKEAYTAVVYHNRSPDF EFSKEAYTAVVYHNRSPDFHEEIKVKLPAT K E A N R S 2 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 2 2 0 0 11 0 1321.6415 Q96N67 Q96N67 614 624 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 8.2613E-05 164.46 By MS/MS 3 0.816 1 1 1 3 1072200 1072200 0 3128 2230 3242 7699;7700;7701 5515;5516 5516 2 39986 0 EAYVNANQAR TFYCVPVPGESTWVKEAYVNANQARVSPST STWVKEAYVNANQARVSPSTSYTPSRHKRS K E A A R V 3 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 10 0 1134.5418 Q9BTE3 Q9BTE3 143 152 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 2 1.3002E-06 209.87 By MS/MS 5 0 1 1 1139500 1139500 0 3129 2349 3243 7702 5517 5517 1 46838 0 ECADLWPR KGEMKGSAITGPVAKECADLWPRIASNAGS ITGPVAKECADLWPRIASNAGSIA______ K E C P R I 1 1 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 8 0 1045.4651 P62829 P62829 124 131 RPL23 60S ribosomal protein L23 yes yes 2 0.037656 96.19 By MS/MS 10 0 1 1 1950600 1950600 0 3130 1147 3244 7703 5518 5518 1 2073300 0 ECEGIVPVPLAEK IRGNIVKHPLTQELKECEGIVPVPLAEKLY LKECEGIVPVPLAEKLYSTKKRKK______ K E C E K L 1 0 0 0 1 0 3 1 0 1 1 1 0 0 2 0 0 0 0 2 0 0 13 0 1439.733 P82932 P82932 104 116 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.00085478 158.05 By MS/MS 10 0 1 1 3569200 3569200 0 3131 1210 3245 7704 5519 5519 1 3793700 0 ECELSPGVNR NIKEICWNLQNIRLRECELSPGVNRDLTRR NIRLRECELSPGVNRDLTRRVRNINGITQH R E C N R D 0 1 1 0 1 0 2 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1159.5292 Q9BXP5 Q9BXP5 489 498 SRRT Serrate RNA effector molecule homolog yes yes 2 0.00088136 128.36 By MS/MS 4 0 1 1 900030 900030 0 3132 2402 3246 7705 5520 5520 1 24570 0 ECGHDVTCPVAK ADKILSTGKYLNVVRECGHDVTCPVAKEII VVRECGHDVTCPVAKEIIYTLKERAYVEQI R E C A K E 1 0 0 1 2 0 1 1 1 0 0 1 0 0 1 0 1 0 0 2 0 0 12 0 1371.5911 Q9BSJ2 Q9BSJ2 462 473 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.0032234 114.97 By MS/MS 4 0 1 1 390200 390200 0 3133 2338 3247 7706 5521 5521 1 10652 0 ECGNAHYQR MLTGQERVALANRKRECGNAHYQRADFVLA LANRKRECGNAHYQRADFVLAANSYDLAIK R E C Q R A 1 1 1 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1133.4672 Q14318 Q14318 226 234 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.00058512 163.77 By MS/MS 6 0 1 1 2338600 2338600 0 3134 1428 3248 7707 5522 5522 1 18237 0 ECICEVEGQVPCPSLVPLPK LSHPANFGPRKYCLRECICEVEGQVPCPSL VEGQVPCPSLVPLPKEMRGKYKAALKADAQ R E C P K E 0 0 0 0 3 1 3 1 0 1 2 1 0 0 4 1 0 0 0 3 0 0 20 0 2310.1058 P82663 P82663 138 157 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2;3 0.0019029 93.243 By MS/MS 9 0 2 2 1198300 1198300 0 3135 1202 3249 7708;7709 5523;5524 5523 2 687690 0 ECLPLIIFLR GVFAPRPSTGPHKLRECLPLIIFLRNRLKY PHKLRECLPLIIFLRNRLKYALTGDEVKKI R E C L R N 0 1 0 0 1 0 1 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 10 0 1272.7264 P62701 P62701 40 49 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.0048645 107.9 By MS/MS 8 0 1 1 425190 425190 0 3136 1140 3250 7710 5525 5525 1 28050 0 ECLTLLSQR EDEEELEKELYREARECLTLLSQRLGSQKF LYREARECLTLLSQRLGSQKFFFGDAPASL R E C Q R L 0 1 0 0 1 1 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 9 0 1118.5754 Q13505 Q13505 325 333 MTX1 Metaxin-1 yes yes 2 0.00054507 152.34 By MS/MS 8 0 1 1 4157800 4157800 0 3137 1376 3251 7711 5526 5526 1 274290 0 ECREEILK LLVFVRKSLNSIEFRECREEILKFLCIFLE LNSIEFRECREEILKFLCIFLEKMGQKIAP R E C L K F 0 1 0 0 1 0 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1075.5332 P78527 P78527 80 87 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.01459 87.181 By MS/MS 2 0.816 1 1 1 3 927240 927240 0 3138 1197 3252 7712;7713;7714 5527;5528 5527 2 42927 0 ECSLQVPEDELVSTLK ______________________________ CSLQVPEDELVSTLKQLVSEKLNVPVRQQR R E C L K Q 0 0 0 1 1 1 3 0 0 0 3 1 0 0 1 2 1 0 0 2 0 0 16 0 1845.903 P11441 P11441 12 27 UBL4A Ubiquitin-like protein 4A yes yes 2 0.034727 76.728 By MS/MS 10 0 1 1 166690 166690 0 3139 554 3253 7715 5529 5529 1 177180 0 ECVGASNQNCR PSTVALWLVDPLTVKECVGASNQNCRTPDA LTVKECVGASNQNCRTPDAVELCKKLGGSC K E C C R T 1 1 2 0 2 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1293.519 O00400 O00400 478 488 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 0.00031269 150.36 By MS/MS 1.5 0.5 1 1 2 287210 287210 0 3140 90 3254 7716;7717 5530 5530 1 14161 0 ECVQPATK ETLKFVARNYLEPGKECVQPATKSCSFSAC NYLEPGKECVQPATKSCSFSACTDGISWPF K E C T K S 1 0 0 0 1 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 8 0 931.44332 P16615 P16615 996 1003 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.02399 101.6 By MS/MS 2 0.816 1 1 1 3 1003300 1003300 0 3141 608 3255 7718;7719;7720 5531 5531 1 47468 0 ECVQQLAENTR SMKCIMGQDGTSLGKECVQQLAENTRYFRR SLGKECVQQLAENTRYFRRRLKEMGFIIYG K E C T R Y 1 1 1 0 1 2 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1346.6249 O15270 O15270 437 447 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 4.327E-49 299.28 By MS/MS 6 0 1 1 9825100 9825100 0 3142 166 3256 7721 5532 5532 1 76616 0 EDAANNYAR TYRQLFHPEQLITGKEDAANNYARGHYTIG QLITGKEDAANNYARGHYTIGKEIIDLVLD K E D A R G 3 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1022.4417 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;A6NHL2;P68366 P68363 97 105 TUBA1B;TUBA1A;TUBA1C;TUBAL3;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 2 0.00013329 168.45 By MS/MS By matching 6.33 2.21 1 2 1 1 1 5 1 76159000 75603000 556800 3143 1185;1754;2314;1186;22 3257 7722;7723;7724;7725;7726;7727 5533;5534;5535;5536 5536 4 1091400 1707600 EDAFYSWESSK LRMFFDALYDEDVVKEDAFYSWESSKDPAE DVVKEDAFYSWESSKDPAEQQGKGVALKSV K E D S K D 1 0 0 1 0 0 2 0 0 0 0 1 0 1 0 3 0 1 1 0 0 0 11 0 1347.5619 Q04637 Q04637 1557 1567 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.018363 90.827 By MS/MS 2 0 1 1 302550 302550 0 3144 1264 3258 7728 5537 5537 1 15038 0 EDAGGMIQR ESVASCLPPLVPAIKEDAGGMIQRLMQQLL LVPAIKEDAGGMIQRLMQQLLESDKYAERK K E D Q R L 1 1 0 1 0 1 1 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 9 0 975.44438 Q92616 Q92616 1372 1380 GCN1L1 Translational activator GCN1 yes yes 2 0.00023397 161.9 By MS/MS 2 0 2 2 724180 724180 0 3145 2068 3259;3260 7729;7730 5538;5539 5539 1342 2 35995 0 EDAPIGPHLQSMPSEQIR SRTLSFGSDLNYATREDAPIGPHLQSMPSE PIGPHLQSMPSEQIRNQLTAMSSVLAKALE R E D I R N 1 1 0 1 0 2 2 1 1 2 1 0 1 0 3 2 0 0 0 0 0 0 18 0 2003.9735 Q14152 Q14152 503 520 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0001191 135.91 By MS/MS 3.12 1.17 1 1 3 2 1 8 12268000 12268000 0 3146 1409 3261;3262 7731;7732;7733;7734;7735;7736;7737;7738 5540;5541;5542;5543;5544 5543 1082 5 335090 0 EDAVSKEVTR KNVKFVLKHKVAQKREDAVSKEVTRKLSEA VAQKREDAVSKEVTRKLSEADNRKMSRKEK R E D T R K 1 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 10 1 1132.5724 Q9UNL2 Q9UNL2 93 102 SSR3 Translocon-associated protein subunit gamma yes yes 2 0.0031678 147.75 By MS/MS 9 0 1 1 352880 352880 0 3147 2844 3263 7739 5545 5545 1 202520 0 EDCLPYAATVLR GTLQALAQIFKHGKREDCLPYAATVLRCLD GKREDCLPYAATVLRCLDGCRLPESNQTLL R E D L R C 2 1 0 1 1 0 1 0 0 0 2 0 0 0 1 0 1 0 1 1 0 0 12 0 1406.6864 Q9BTW9 Q9BTW9 267 278 TBCD Tubulin-specific chaperone D yes yes 2 0.00038516 143.96 By MS/MS 4 0 1 1 789800 789800 0 3148 2354 3264 7740 5546 5546 1 21561 0 EDCSPDEFIDVIVGNR ILHEYKIFNAEVLFREDCSPDEFIDVIVGN DCSPDEFIDVIVGNRVYMPCLYVYNKIDQI R E D N R V 0 1 1 3 1 0 2 1 0 2 0 0 0 1 1 1 0 0 0 2 0 0 16 0 1863.8309 P55039 P55039 221 236 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 2 0.000211 132.17 By MS/MS 7 0 1 1 98519 98519 0 3149 1024 3265 7741 5547;5548 5548 2 1760.6 0 EDDSSASTSQSTR PQRPKLNLKPRSTPKEDDSSASTSQSTRAA PKEDDSSASTSQSTRAASIFGGAKPVDTAA K E D T R A 1 1 0 2 0 1 1 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 13 0 1369.5593 P23588 P23588 344 356 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.044707 73.951 By matching By MS/MS 5.67 0.471 1 2 1 2 495580 191290 304300 3150 672 3266 7742;7743;7744 5549 5549 1 1491.6 903280 EDDVGTGAGLLEIK RACGARIVSRPEELREDDVGTGAGLLEIKK REDDVGTGAGLLEIKKIGDEYFTFITDCKD R E D I K K 1 0 0 2 0 0 2 3 0 1 2 1 0 0 0 0 1 0 0 1 0 0 14 0 1415.7144 P49368 P49368 340 353 CCT3 T-complex protein 1 subunit gamma yes yes 2 2.6175E-46 277.96 By MS/MS 7 1.41 1 1 1 1 1 5 23201000 23201000 0 3151 916 3267 7745;7746;7747;7748;7749 5550;5551;5552;5553 5551 4 372760 0 EDEEESLNEVGYDDIGGCR APDTVIHCEGEPIKREDEEESLNEVGYDDI ESLNEVGYDDIGGCRKQLAQIKEMVELPLR R E D C R K 0 1 1 3 1 0 5 3 0 1 1 0 0 0 0 1 0 0 1 1 0 0 19 0 2184.8753 P55072 P55072 192 210 VCP Transitional endoplasmic reticulum ATPase yes yes 2 2.6083E-69 290.17 By MS/MS 4.5 0.5 1 1 2 2788100 2788100 0 3152 1026 3268 7750;7751 5554 5554 1 82593 0 EDEIPETVSLEMLDAAK DWQKKILIWSGRFKKEDEIPETVSLEMLDA EIPETVSLEMLDAAKNKMRVKISYLMIALT K E D A K N 2 0 0 2 0 0 4 0 0 1 2 1 1 0 1 1 1 0 0 1 0 0 17 0 1888.8976 Q96A26 Q96A26 80 96 FAM162A Protein FAM162A yes yes 2 1.7401E-10 160.56 By MS/MS 10 0 2 2 405600 405600 0 3153 2113 3269;3270 7752;7753 5555;5556 5555 1379 2 431110 0 EDFDSLLQSAK AQTDLLQIDPNFGSKEDFDSLLQSAKKKSI FGSKEDFDSLLQSAKKKSIRVILDLTPNYR K E D A K K 1 0 0 2 0 1 1 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 11 0 1251.5983 P08195 P08195 288 298 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 4.906E-38 271.26 By MS/MS 4.5 0.5 1 1 2 4298200 4298200 0 3154 499 3271 7754;7755 5557;5558 5558 2 158530 0 EDFLNICIEPDTISK LSITTRNNQLDPTSKEDFLNICIEPDTISK EDFLNICIEPDTISKGDFITIGSRKVRNPK K E D S K G 0 0 1 2 1 0 2 0 0 3 1 1 0 1 1 1 1 0 0 0 0 0 15 0 1792.8553 Q53H12 Q53H12 328 342 AGK Acylglycerol kinase, mitochondrial yes yes 2 3.2334E-38 257.54 By MS/MS 7 0 1 1 498020 498020 0 3155 1587 3272 7756 5559;5560 5559 2 8899.7 0 EDGAISTIVLR SEVGDTQVVVFKHEKEDGAISTIVLRGSTD KHEKEDGAISTIVLRGSTDNLMDDIERAVD K E D L R G 1 1 0 1 0 0 1 1 0 2 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1172.6401 P50990 P50990 368 378 CCT8 T-complex protein 1 subunit theta yes yes 2 6.497E-05 167.12 By MS/MS By MS/MS 5.5 2.6 1 1 1 2 1 1 1 7 1 66512000 66440000 72099 3156 955 3273 7757;7758;7759;7760;7761;7762;7763;7764 5561;5562;5563;5564;5565;5566;5567;5568 5565 8 1306500 221120 EDGLAQQQTQLNLR SKADEASELACPTPKEDGLAQQQTQLNLRS KEDGLAQQQTQLNLRSLLVNPEGPTLMRLN K E D L R S 1 1 1 1 0 4 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 14 0 1612.8169 P49327 P49327 2207 2220 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 1.0237E-142 399.31 By MS/MS By MS/MS 2.86 1.36 3 3 3 3 2 10 4 50059000 49758000 301520 3157 915 3274 7765;7766;7767;7768;7769;7770;7771;7772;7773;7774;7775;7776;7777;7778 5569;5570;5571;5572;5573;5574;5575;5576;5577;5578 5576 10 1964900 373520 EDGQEYAQVIK GKNENESEKRELVFKEDGQEYAQVIKMLGN LVFKEDGQEYAQVIKMLGNGRLEAMCFDGV K E D I K M 1 0 0 1 0 2 2 1 0 1 0 1 0 0 0 0 0 0 1 1 0 0 11 0 1278.6092 P47813;O14602 P47813 30 40 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2 3.318E-22 243.65 By MS/MS By matching 9 0 2 1 1 2243700 2146500 97161 3158 116 3275 7779;7780 5579 5579 1 1231900 1047100 EDGSEVGVGGAQVTGSNTR GSADLNATFYGPVKKEDGSEVGVGGAQVTG EVGVGGAQVTGSNTRKHILQVSTFQMTILM K E D T R K 1 1 1 1 0 1 2 5 0 0 0 0 0 0 0 2 2 0 0 3 0 0 19 0 1818.8344 Q13618 Q13618 570 588 CUL3 Cullin-3 yes yes 2 6.7453E-35 249.82 By MS/MS 4.5 0.5 1 1 2 1293500 1293500 0 3159 1389 3276 7781;7782 5580;5581 5580 2 46587 0 EDIEFICK FLNKMKIMVIKDIEREDIEFICKTIGTKPV VIKDIEREDIEFICKTIGTKPVAHIDQFTA R E D C K T 0 0 0 1 1 0 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 8 0 1052.4848 P50991 P50991 331 338 CCT4 T-complex protein 1 subunit delta yes yes 2 0.012155 116.9 By MS/MS 7 0.816 1 1 1 3 41583000 41583000 0 3160 956 3277 7783;7784;7785 5582 5582 1 433820 0 EDIQSVMTEIR YRGALWILGEYCSTKEDIQSVMTEIRRSLG CSTKEDIQSVMTEIRRSLGEIPIVESEIKK K E D I R R 0 1 0 1 0 1 2 0 0 2 0 0 1 0 0 1 1 0 0 1 0 0 11 0 1319.6391 P53618 P53618 470 480 COPB1 Coatomer subunit beta yes yes 2 2.3348E-29 256.24 By MS/MS 4.33 0.471 2 1 3 1038200 1038200 0 3161 1004 3278;3279 7786;7787;7788 5583;5584 5583 769 1 30539 0 EDIRNAAWHK YMVHHLWAYRDLQTREDIRNAAWHKHGWEE DLQTREDIRNAAWHKHGWEELVYYTVPLIQ R E D H K H 2 1 1 1 0 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 10 1 1238.6156 O75323 O75323 246 255 GBAS Protein NipSnap homolog 2 yes yes 3 0.010428 101.46 By MS/MS 8 0 1 1 1321700 1321700 0 3162 296 3280 7789 5585 5585 1 87189 0 EDISSIEIVGGATR EPPLKAVMEQANLQREDISSIEIVGGATRI REDISSIEIVGGATRIPAVKEQITKFFLKD R E D T R I 1 1 0 1 0 0 2 2 0 3 0 0 0 0 0 2 1 0 0 1 0 0 14 0 1445.7362 O95757 O95757 333 346 HSPA4L Heat shock 70 kDa protein 4L yes yes 2 2.3914E-12 207.88 By MS/MS 4 0 1 1 406780 406780 0 3163 405 3281 7790 5586 5586 1 11105 0 EDITQEFPGK YDMEIIEEEAFLAWKEDITQEFPGKGKALF FLAWKEDITQEFPGKGKALFQVNQWLTWLE K E D G K G 0 0 0 1 0 1 2 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 10 0 1162.5506 P78344 P78344 871 880 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 2.2518E-10 196.99 By MS/MS 4 0 1 1 2965000 2965000 0 3164 1192 3282 7791 5587 5587 1 80942 0 EDIVVPVYLR VYEVSGRIEAIEGSREDIVVPVYLRERTPA IEGSREDIVVPVYLRERTPARDYNNSYYGL R E D L R E 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 3 0 0 10 0 1201.6707 P51784 P51784 586 595 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.0027118 114.93 By MS/MS 4 0 1 1 703900 703900 0 3165 976 3283 7792 5588 5588 1 19216 0 EDIYSGGGGGGSR PIQGHRVEVKKAVPKEDIYSGGGGGGSRSS PKEDIYSGGGGGGSRSSRGGRGGRGRGGGR K E D S R S 0 1 0 1 0 0 1 6 0 1 0 0 0 0 0 2 0 0 1 0 0 0 13 0 1210.5214 Q13151 Q13151 177 189 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 2 2.0809E-05 169.21 By MS/MS 8 0 1 1 1138500 1138500 0 3166 1341 3284 7793 5589 5589 1 75104 0 EDKIHNAENIQPGEQK VPPRPEEADETWDSKEDKIHNAENIQPGEQ DKIHNAENIQPGEQKYEYKSDQWKPLNLEE K E D Q K Y 1 0 2 1 0 2 3 1 1 2 0 2 0 0 1 0 0 0 0 0 0 0 16 1 1848.8966 Q04637 Q04637 578 593 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.014799 73.758 By MS/MS 2 0 1 1 311650 311650 0 3167 1264 3285 7794 5590 5590 1 15491 0 EDLEELQAR FLLFANQTEKDIILREDLEELQARYPNRFK KDIILREDLEELQARYPNRFKLWFTLDHPP R E D A R Y 1 1 0 1 0 1 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1101.5302 Q9UHQ9 Q9UHQ9 224 232 CYB5R1 NADH-cytochrome b5 reductase 1 yes yes 2 0.0019304 130.56 By MS/MS 8 0 1 1 863760 863760 0 3168 2781 3286 7795 5591 5591 1 56982 0 EDLILSLR IDFTPPPNDPHGIQREDLILSLRAVLASTP DPHGIQREDLILSLRAVLASTPRFAEFLLP R E D L R A 0 1 0 1 0 0 1 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 8 0 957.5495 Q96T76 Q96T76 239 246 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.001859 159.04 By MS/MS 4.5 0.5 1 1 2 1814100 1814100 0 3169 2261 3287 7796;7797 5592 5592 1 52807 0 EDLPGFVFESNR IAIHNSDGQQATILKEDLPGFVFESNRGTK ILKEDLPGFVFESNRGTKHSFTAETSLGSE K E D N R G 0 1 1 1 0 0 2 1 0 0 1 0 0 2 1 1 0 0 0 1 0 0 12 0 1408.6623 Q9ULT8 Q9ULT8 783 794 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0020024 121.9 By MS/MS 2 0.816 1 1 1 3 311920 311920 0 3170 2826 3288 7798;7799;7800 5593;5594 5594 2 12176 0 EDLQLDKPASGVK IRFVIKKHELLNSTREDLQLDKPASGVKEE TREDLQLDKPASGVKEEWYARITKLRKMVD R E D V K E 1 0 0 2 0 1 1 1 0 0 2 2 0 0 1 1 0 0 0 1 0 0 13 1 1398.7355 P78347 P78347 444 456 GTF2I General transcription factor II-I yes yes 2 1.172E-10 203.03 By MS/MS 3 0 1 1 1785500 1785500 0 3171 1194 3289 7801 5595 5595 1 46609 0 EDLRLPEGDLGK QDGYLSLLQDSGEVREDLRLPEGDLGKEIE EVREDLRLPEGDLGKEIEQKYDCGEEILIT R E D G K E 0 1 0 2 0 0 2 2 0 0 3 1 0 0 1 0 0 0 0 0 0 0 12 1 1340.6936 P63241 P63241 110 121 EIF5A Eukaryotic translation initiation factor 5A-1 yes yes 3 0.006568 92.112 By MS/MS 9.5 0.5 1 1 2 14466000 14466000 0 3172 1177 3290 7802;7803 5596 5596 1 15111000 0 EDLRLPEGDLGKEIEQK QDGYLSLLQDSGEVREDLRLPEGDLGKEIE LRLPEGDLGKEIEQKYDCGEEILITVLSAM R E D Q K Y 0 1 0 2 0 1 4 2 0 1 3 2 0 0 1 0 0 0 0 0 0 0 17 2 1968.0164 P63241 P63241 110 126 EIF5A Eukaryotic translation initiation factor 5A-1 yes yes 3 1.8654E-10 159.4 By MS/MS 9.5 0.5 1 1 2 4216200 4216200 0 3173 1177 3291 7804;7805 5597 5597 1 4387400 0 EDLSGTQAGLNVIK GLPPYDPIRMEFENKEDLSGTQAGLNVIKE KEDLSGTQAGLNVIKEAEAQLWWAAKELRR K E D I K E 1 0 1 1 0 1 1 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1443.7569 P57076 P57076 172 185 C21orf59 UPF0769 protein C21orf59 yes yes 2 5.7953E-26 246.08 By MS/MS 8 0 1 1 796170 796170 0 3174 1052 3292 7806 5598 5598 1 52523 0 EDLVVAPAGITLK EEEHDCFLEEIMTKREDLVVAPAGITLKEA KREDLVVAPAGITLKEANEILQRSKKGKLP R E D L K E 2 0 0 1 0 0 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 13 0 1324.7602 P12268 P12268 183 195 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.00046397 137.98 By MS/MS 7.5 1.12 1 1 1 1 4 3695300 3695300 0 3175 564 3293 7807;7808;7809;7810 5599;5600 5599 2 85118 0 EDLYLKPIQR LKVRIMGPNYTPGKKEDLYLKPIQRTILMM TPGKKEDLYLKPIQRTILMMGRYVEPIEDV K E D Q R T 0 1 0 1 0 1 1 0 0 1 2 1 0 0 1 0 0 0 1 0 0 0 10 1 1273.703 P13639 P13639 440 449 EEF2 Elongation factor 2 yes yes 2 0.006892 132.76 By MS/MS 5 1.41 1 1 1 1 1 5 37529000 37529000 0 3176 576 3294 7811;7812;7813;7814;7815 5601;5602 5602 2 883830 0 EDMAALEK YVGEGMEEGEFSEAREDMAALEKDYEEVGV GEFSEAREDMAALEKDYEEVGVDSVEGEGE R E D E K D 2 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 8 0 905.41643 P68363;Q71U36;Q9BQE3;P68366 P68363 423 430 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2 0.037656 96.19 By MS/MS By matching 4.4 2.42 1 1 2 1 4 1 20732000 20606000 125850 3177 1185;1754;2314;1186 3295 7816;7817;7818;7819;7820 5603;5604 5604 2 182380 385990 EDMAALEKDYEEVGADSADGEDEGEEY YVGEGMEEGEFSEAREDMAALEKDYEEVGA VGADSADGEDEGEEY_______________ R E D E Y - 4 0 0 5 0 0 8 3 0 0 1 1 1 0 0 1 0 0 2 1 0 0 27 1 2965.1455 Q9BQE3 Q9BQE3 423 449 TUBA1C Tubulin alpha-1C chain yes yes 2 2.5562E-08 117.48 By MS/MS 6 0 1 1 5348200 5348200 0 3178 2314 3296 7821 5605 5605 1 41705 0 EDMAALEKDYEEVGVDSVEGEGEEEGEEY YVGEGMEEGEFSEAREDMAALEKDYEEVGV VDSVEGEGEEEGEEY_______________ R E D E Y - 2 0 0 3 0 0 11 4 0 0 1 1 1 0 0 1 0 0 2 3 0 0 29 1 3235.3034 P68363;Q71U36 P68363 423 451 TUBA1B;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 3 4.9567E-05 64.27 By MS/MS 6 0 2 2 7554400 7554400 0 3179 1185;1754 3297;3298 7822;7823 5606;5607 5607 928 2 58909 0 EDNDLDSQVSQEGLGPVLQPQPK RFDDVWPMDPHPRTREDNDLDSQVSQEGLG VSQEGLGPVLQPQPKSYFKSISVTKITKPD R E D P K S 0 0 1 3 0 4 2 2 0 0 3 1 0 0 3 2 0 0 0 2 0 0 23 0 2492.2031 O00165 O00165 183 205 HAX1 HCLS1-associated protein X-1 yes yes 2 1.7661E-07 125.36 By MS/MS 8 0 1 1 674120 674120 0 3180 73 3299 7824 5608 5608 1 44472 0 EDNFNTAMQVLR GDGLHLVVDENGDFREDNFNTAMQVLRDAG DFREDNFNTAMQVLRDAGDLAKGDQKGRKG R E D L R D 1 1 2 1 0 1 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 12 0 1436.6718 P42285 P42285 340 351 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 2.453E-33 266.17 By MS/MS 4 0 1 1 351020 351020 0 3181 848 3300 7825 5609 5609 1 9582.5 0 EDNGIGILTLNNPSR KTLQQFPGGSIDLQKEDNGIGILTLNNPSR EDNGIGILTLNNPSRMNAFSGVMMLQLLEK K E D S R M 0 1 3 1 0 0 1 2 0 2 2 0 0 0 1 1 1 0 0 0 0 0 15 0 1611.8216 Q9NTX5 Q9NTX5 60 74 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 5.0311E-63 297.5 By MS/MS 8 0 1 1 2383000 2383000 0 3182 2633 3301 7826 5610 5610 1 157200 0 EDPNLVPSISNK DPYNVLAPKGASGTREDPNLVPSISNKRIV GTREDPNLVPSISNKRIVGCICEEDNTSVV R E D N K R 0 0 2 1 0 0 1 0 0 1 1 1 0 0 2 2 0 0 0 1 0 0 12 0 1311.667 P10606 P10606 75 86 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 2 0.010893 96.015 By MS/MS 10 0 1 1 888180 888180 0 3183 540 3302 7827 5611;5612 5611 2 944040 0 EDPVLLQGIR VIVLLLEGSLVWAPREDPVLLQGIRVSIAQ VWAPREDPVLLQGIRVSIAQWPALTFTPLV R E D I R V 0 1 0 1 0 1 1 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 10 0 1138.6346 Q7LBC6 Q7LBC6 102 111 KDM3B Lysine-specific demethylase 3B yes yes 2 0.0010146 122.19 By MS/MS 1.5 0.5 1 1 2 132320 132320 0 3184 1772 3303 7828;7829 5613 5613 1 6553.7 0 EDQILVSLAGLK LVNIQDVILQENLEKEDQILVSLAGLKQIK LEKEDQILVSLAGLKQIKDILKGSLRFNQS K E D L K Q 1 0 0 1 0 1 1 1 0 1 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1284.7289 Q92609 Q92609 632 643 TBC1D5 TBC1 domain family member 5 yes yes 2 8.7039E-11 196.44 By MS/MS 4.5 0.5 1 1 2 333820 333820 0 3185 2066 3304 7830;7831 5614 5614 1 9709.6 0 EDQSILCTGESGAGK YAITDTAYRSMMQDREDQSILCTGESGAGK EDQSILCTGESGAGKTENTKKVIQYLAYVA R E D G K T 1 0 0 1 1 1 2 3 0 1 1 1 0 0 0 2 1 0 0 0 0 0 15 0 1550.6883 Q7Z406;P35580;P35579 P35579 166 180 MYH14;MYH10;MYH9 Myosin-14;Myosin-10;Myosin-9 no no 2 4.5705E-07 161.87 By MS/MS 2 0 1 1 204380 204380 0 3186 793;794;1788 3305 7832 5615 5615 1 10159 0 EDQTEYLEER GEPIGRGTKVILHLKEDQTEYLEERRVKEV ILHLKEDQTEYLEERRVKEVVKKHSQFIGY K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P07900;P08238;Q58FF7;Q58FF6 P08238 187 196 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 2 0.00036756 150.15 By MS/MS 4.5 0.5 1 1 2 967170 967170 0 3187 501;494 3306 7833;7834 5616 5616 1 30371 0 EDSGLFSPIR LCDAPDSPRPVKASREDSGLFSPIRSSAFS VKASREDSGLFSPIRSSAFSPLGGCTPAEC R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 0.027996 105.52 By MS/MS 2 0 1 1 0 0 0 3188 2809 3307 7835 5617 5617 1 0 0 EDSLDSVLFLK QICEDHIKAQIHQFREDSLDSVLFLKKIDR HQFREDSLDSVLFLKKIDRCWQNHCRQMIM R E D L K K 0 0 0 2 0 0 1 0 0 0 3 1 0 1 0 2 0 0 0 1 0 0 11 0 1264.6551 Q13620;Q13619 Q13620 277 287 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.0035968 113.62 By MS/MS 4.5 0.5 1 1 2 1888300 1888300 0 3189 1390 3308 7836;7837 5618;5619 5618 2 63470 0 EDTFYVVSFR PDRSQPAFLDAIDRREDTFYVVSFRRDHLL AIDRREDTFYVVSFRRDHLLLPAISHNKTS R E D F R R 0 1 0 1 0 0 1 0 0 0 0 0 0 2 0 1 1 0 1 2 0 0 10 0 1261.5979 Q99941 Q99941 589 598 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 0.0029248 119.62 By MS/MS 4 0 1 1 0 0 0 3190 2297 3309 7838 5620 5620 1 0 0 EDTNNLFSVQFR LTHDDTGARYLHLAREDTNNLFSVQFRTTP LAREDTNNLFSVQFRTTPMDSTGVPHILEH R E D F R T 0 1 2 1 0 1 1 0 0 0 1 0 0 2 0 1 1 0 0 1 0 0 12 0 1468.6947 Q5JRX3 Q5JRX3 82 93 PITRM1 Presequence protease, mitochondrial yes yes 2 2.0266E-07 189.58 By MS/MS 4 0 1 1 1242500 1242500 0 3191 1606 3310 7839 5621 5621 1 33920 0 EDVLTLLLPVMGDSK GSIFGLGLAYAGSNREDVLTLLLPVMGDSK EDVLTLLLPVMGDSKSSMEVAGVTALACGM R E D S K S 0 0 0 2 0 0 1 1 0 0 4 1 1 0 1 1 1 0 0 2 0 0 15 0 1628.8695 Q13200 Q13200 495 509 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.011792 82.171 By MS/MS 4.5 0.5 1 1 2 700890 700890 0 3192 1347 3311 7840;7841 5622 5622 1053 1 19701 0 EDVRPEEIADQELAEALQK GELPECARLAYGAGREDVRPEEIADQELAE PEEIADQELAEALQKSAEDAERQKP_____ R E D Q K S 3 1 0 2 0 2 5 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 19 1 2182.0754 Q5TDH0 Q5TDH0 371 389 DDI2 Protein DDI1 homolog 2 yes yes 3 0.010391 66.201 By MS/MS 6 0 1 1 1010000 1010000 0 3193 1639 3312 7842 5623 5623 1 7876.3 0 EDYLYAVR YITAFFFAGYYLVKREDYLYAVRDREMFGY GYYLVKREDYLYAVRDREMFGYMKLHPEDF R E D V R D 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 1027.4975 O95298;E9PQ53 O95298 78 85 NDUFC2;NDUFC2-KCTD14 NADH dehydrogenase [ubiquinone] 1 subunit C2;NADH dehydrogenase [ubiquinone] 1 subunit C2, isoform 2 yes no 2 0.005715 134.44 By MS/MS 10 0 1 1 367080 367080 0 3194 383 3313 7843 5624 5624 1 390170 0 EEAAEHIPLLFFAFPSAK TDMDQAMERYVSMPREEAAEHIPLLFFAFP AEHIPLLFFAFPSAKDPTWEDRFPGRSTMI R E E A K D 4 0 0 0 0 0 3 0 1 1 2 1 0 3 2 1 0 0 0 0 0 0 18 0 2016.0357 Q6NUM9 Q6NUM9 429 446 RETSAT All-trans-retinol 13,14-reductase yes yes 3 0.00016327 133.25 By MS/MS 6 0 1 1 417940 417940 0 3195 1691 3314 7844 5625 5625 1 3259.1 0 EEACDCLFEVVNK FINMLLGHMSIEVLREEACDCLFEVVNKGM LREEACDCLFEVVNKGMDPVDKMKLVESLC R E E N K G 1 0 1 1 2 0 3 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 13 0 1611.6909 O43592 O43592 241 253 XPOT Exportin-T yes yes 2 3.8733E-25 234.92 By MS/MS 4 0.816 1 1 1 3 1802400 1802400 0 3196 208 3315 7845;7846;7847 5626 5626 1 52734 0 EEAQAEIEQYR SEARKRKNRRLKQAKEEAQAEIEQYRLQRE KQAKEEAQAEIEQYRLQREKEFKAKEAAAL K E E Y R L 2 1 0 0 0 2 4 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 11 0 1364.6208 O75348 O75348 38 48 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 2 8.9416E-30 280.09 By MS/MS 10 0 1 1 666940 666940 0 3197 298 3316 7848 5627 5627 1 708890 0 EEASDYLELDTIK GNTLGRGTTITLVLKEEASDYLELDTIKNL LKEEASDYLELDTIKNLVKKYSQFINFPIY K E E I K N 1 0 0 2 0 0 3 0 0 1 2 1 0 0 0 1 1 0 1 0 0 0 13 0 1524.7195 P14625 P14625 253 265 HSP90B1 Endoplasmin yes yes 2 1.7809E-25 244.16 By MS/MS 4.5 0.5 1 1 2 1545500 1545500 0 3198 589 3317 7849;7850 5628 5628 1 45098 0 EEATVLQPPVSR LGDPQVASELLLKPREEATVLQPPVSRQRP KPREEATVLQPPVSRQRPRRTAQAKAGNLM R E E S R Q 1 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 1 0 0 2 0 0 12 0 1324.6987 O75127 O75127 349 360 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.00031261 147.37 By MS/MS 5 0 1 1 5416400 5416400 0 3199 280 3318 7851 5629 5629 1 222640 0 EECDKYALQSQQR AMTAENLAVKHKISREECDKYALQSQQRWK SREECDKYALQSQQRWKAANDAGYFNDEMA R E E Q R W 1 1 0 1 1 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 13 1 1653.7417 P42765 P42765 177 189 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 3 0.0021973 85.973 By MS/MS 7 0 1 1 1267000 1267000 0 3200 855 3319 7852 5630 5630 1 22641 0 EECGPLPIVVASPR QQLADKKGLHVVEIREECGPLPIVVASPRG REECGPLPIVVASPRGPLRKDPEPEDEVPD R E E P R G 1 1 0 0 1 0 2 1 0 1 1 0 0 0 3 1 0 0 0 2 0 0 14 0 1522.7814 P82675 P82675 375 388 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 6.4258E-05 152.64 By MS/MS 7 0 1 1 2442500 2442500 0 3201 1205 3320 7853 5631 5631 1 43648 0 EEDGSLSLDGADSTGVVAK EEWSCSLCHVLPDLKEEDGSLSLDGADSTG SLSLDGADSTGVVAKLSPANQRKCERVLLA K E E A K L 2 0 0 3 0 0 2 3 0 0 2 1 0 0 0 3 1 0 0 2 0 0 19 0 1848.8589 Q13263 Q13263 677 695 TRIM28 Transcription intermediary factor 1-beta yes yes 2 7.0482E-15 217.2 By MS/MS By MS/MS 3.14 1.12 1 1 1 4 5 2 14742000 14601000 141100 3202 1351 3321 7854;7855;7856;7857;7858;7859;7860 5632;5633;5634 5633 3 401170 294850 EEEEFNTGPLSVLTQSVK NKPKSEMTPEELQKREEEEFNTGPLSVLTQ EFNTGPLSVLTQSVKNNTQVLINCRNNKKL R E E V K N 0 0 1 0 0 1 4 1 0 0 2 1 0 1 1 2 2 0 0 2 0 0 18 0 2005.9844 P62316 P62316 20 37 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.022809 73.156 By MS/MS 10 0 1 1 137480 137480 0 3203 1130 3322 7861 5635 5635 1 146130 0 EEEGTGVVHQAPYFGAEDYR KENGAFTVLVDNYVKEEEGTGVVHQAPYFG GVVHQAPYFGAEDYRVCMDFNIIRKDSLPV K E E Y R V 2 1 0 1 0 1 4 3 1 0 0 0 0 1 1 0 1 0 2 2 0 0 20 0 2252.9974 P41252 P41252 315 334 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 1.625E-05 128.79 By MS/MS 3 0 1 1 3834500 3834500 0 3204 840 3323 7862 5636 5636 1 100100 0 EEEIAALVIDNGSGMCK ______________________________ EIAALVIDNGSGMCKAGFAGDDAPRAVFPS M E E C K A 2 0 1 1 1 0 3 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 17 0 1834.8441 P63261 P63261 2 18 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 2 2.4033E-19 209.25 By MS/MS 7.83 1.34 1 2 1 1 1 6 3072300 3072300 0 3205 1179 3324;3325 7863;7864;7865;7866;7867;7868 5637;5638;5639;5640;5641 5637 919 5 157350 0 EEEIEFLYNENTVR NAYRFLIQNVLRLQKEEEIEFLYNENTVRE KEEEIEFLYNENTVRESPNITDRWILSFMQ K E E V R E 0 1 2 0 0 0 5 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 14 0 1783.8265 P41252 P41252 673 686 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0032331 111.52 By MS/MS 3 0 1 1 282740 282740 0 3206 840 3326 7869 5642 5642 1 7380.9 0 EEELREYQER LKEREERERAERAKREEELREYQERVKKLE ERAKREEELREYQERVKKLEEVERKKRQRE R E E E R V 0 2 0 0 0 1 5 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 1 1379.6317 Q14152 Q14152 838 847 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0011541 159.28 By MS/MS By matching 3 0 2 1 1 878090 854280 23813 3207 1409 3327 7870;7871 5643 5643 1 22301 34128 EEETSIDVAGKPNEVTK LAKEQKANEQKKESKEEETSIDVAGKPNEV ETSIDVAGKPNEVTKAAESPDQKDTDGGPK K E E T K A 1 0 1 1 0 0 4 1 0 1 0 2 0 0 1 1 2 0 0 2 0 0 17 1 1844.9004 P53985 P53985 463 479 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.0026133 148.89 By MS/MS 3 1.41 1 1 1 1 1 5 896000 896000 0 3208 1008 3328 7872;7873;7874;7875;7876 5644 5644 1 35384 0 EEFAIMQTPAGELYDK ITASVQNPALRLVTREEFAIMQTPAGELYD EFAIMQTPAGELYDKSIIQSAQQDSIKKAN R E E D K S 2 0 0 1 0 1 3 1 0 1 1 1 1 1 1 0 1 0 1 0 0 0 16 0 1840.8553 Q92616 Q92616 761 776 GCN1L1 Translational activator GCN1 yes yes 2 9.8771E-08 166.62 By MS/MS 2.5 0.5 2 2 4 665720 665720 0 3209 2068 3329;3330 7877;7878;7879;7880 5645;5646;5647 5645 1343 3 27237 0 EEFDRLDSSAVLDTGK LCCRHDKVEDALNLKEEFDRLDSSAVLDTG EFDRLDSSAVLDTGKYVGLVRVLAKHGKLQ K E E G K Y 1 1 0 3 0 0 2 1 0 0 2 1 0 1 0 2 1 0 0 1 0 0 16 1 1780.8479 P42704 P42704 735 750 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 3.4853E-09 179.5 By MS/MS 3.5 0.5 1 1 2 862490 862490 0 3210 854 3331 7881;7882 5648 5648 1 22670 0 EEFEHQQK NEIINWLDKNQTAEKEEFEHQQKELEKVCN KNQTAEKEEFEHQQKELEKVCNPIITKLYQ K E E Q K E 0 0 0 0 0 2 3 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 8 0 1073.4778 P11142 P11142 590 597 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.023083 102.77 By MS/MS By matching 5 0 2 1 1 376200 343230 32965 3211 546 3332 7883;7884 5649 5649 1 14108 97543 EEFGAEPELAVSAPGR PQVAELLAEARRAFREEFGAEPELAVSAPG EFGAEPELAVSAPGRVNLIGEHTDYNQGLV R E E G R V 3 1 0 0 0 0 4 2 0 0 1 0 0 1 2 1 0 0 0 1 0 0 16 0 1657.7948 P51570 P51570 22 37 GALK1 Galactokinase yes yes 2 0.00021513 132.03 By MS/MS 7 0 1 1 732780 732780 0 3212 967 3333 7885 5650 5650 1 13095 0 EEFVLAAQK YSTLAGTRKDVEVTKEEFVLAAQKFGQVTP DVEVTKEEFVLAAQKFGQVTPMEVDILFQL K E E Q K F 2 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1033.5444 Q9UJS0 Q9UJS0 252 260 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 2.6785E-06 186.13 By MS/MS 5 0 1 1 4365400 4365400 0 3213 2798 3334 7886 5651 5651 1 179440 0 EEGMVPFIFVGTR VRVRVEGDNDKKNPREEGMVPFIFVGTREN PREEGMVPFIFVGTRENISNAQALLEYHLS R E E T R E 0 1 0 0 0 0 2 2 0 1 0 0 1 2 1 0 1 0 0 2 0 0 13 0 1480.7384 P51116 P51116 339 351 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 0.0010561 124.67 By MS/MS 4.5 0.5 1 1 2 302910 302910 0 3214 958 3335 7887;7888 5652 5652 724 1 9480.8 0 EEGVLTLWR RGYKNVFNALIRITREEGVLTLWRGCIPTM LIRITREEGVLTLWRGCIPTMARAVVVNAA R E E W R G 0 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 1 1 0 1 0 0 9 0 1101.5819 Q02978 Q02978 174 182 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.00034853 156.75 By MS/MS 6 3.56 1 1 1 3 14873000 14873000 0 3215 1260 3336 7889;7890;7891 5653;5654 5654 2 1072000 0 EEIAQLAR VVWLWLGTQSFVFQREEIAQLARQYAGLDH QSFVFQREEIAQLARQYAGLDHELAFSRLI R E E A R Q 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 928.49779 Q99720 Q99720 40 47 SIGMAR1 Sigma non-opioid intracellular receptor 1 yes yes 2 0.0016808 161.9 By MS/MS 8 0 1 1 9110500 9110500 0 3216 2286 3337 7892 5655 5655 1 601010 0 EEIDHAEYYLYK SSLTISRLIDNISSREEIDHAEYYLYKFRH SSREEIDHAEYYLYKFRHSPNCWYLRNWTI R E E Y K F 1 0 0 1 0 0 3 0 1 1 1 1 0 0 0 0 0 0 3 0 0 0 12 0 1571.7144 Q92552 Q92552 83 94 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 5.985E-11 202.05 By MS/MS 7 0 1 1 4726400 4726400 0 3217 2059 3338 7893 5656 5656 1 84461 0 EEIFGPVMQILK PTVFGDVQDGMTIAKEEIFGPVMQILKFKT IAKEEIFGPVMQILKFKTIEEVVGRANNST K E E L K F 0 0 0 0 0 1 2 1 0 2 1 1 1 1 1 0 0 0 0 1 0 0 12 0 1402.753 P05091 P05091 415 426 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 1.522E-11 211.27 By MS/MS 6 0 1 1 360320 360320 0 3218 467 3339 7894 5657 5657 1 2809.8 0 EEIFGPVQPLFK PTVFGGVQDDMRIAKEEIFGPVQPLFKFKK IAKEEIFGPVQPLFKFKKIEEVVERANNTR K E E F K F 0 0 0 0 0 1 2 1 0 1 1 1 0 2 2 0 0 0 0 1 0 0 12 0 1402.7497 P30837 P30837 415 426 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 4.9621E-05 166.09 By MS/MS 6.5 0.5 1 1 2 3219400 3219400 0 3219 747 3340 7895;7896 5658;5659 5658 2 26084 0 EEIINYEFDTK RQYQLLFTQGSGENKEEIINYEFDTKDLVC GENKEEIINYEFDTKDLVCLGLSSIVGVWY K E E T K D 0 0 1 1 0 0 3 0 0 2 0 1 0 1 0 0 1 0 1 0 0 0 11 0 1399.6507 Q8TCT9 Q8TCT9 151 161 HM13 Minor histocompatibility antigen H13 yes yes 2 4.637E-05 169.93 By MS/MS 2 0.816 1 1 1 3 744940 744940 0 3220 1997 3341 7897;7898;7899 5660 5660 1 29624 0 EEIIPVAAEYDK EQQKEFQATARKFAREEIIPVAAEYDKTGE FAREEIIPVAAEYDKTGEYPVPLIRRAWEL R E E D K T 2 0 0 1 0 0 3 0 0 2 0 1 0 0 1 0 0 0 1 1 0 0 12 0 1375.6871 P11310 P11310 58 69 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0020283 121.6 By MS/MS By matching 7.33 0.471 2 1 2 1 8932100 8897700 34357 3221 552 3342 7900;7901;7902 5661 5661 1 165490 141040 EEIKDDNPHLK EVADVLEKATQCVPKEEIKDDNPHLKNLYE CVPKEEIKDDNPHLKNLYEGLVMTEVQIQK K E E L K N 0 0 1 2 0 0 2 0 1 1 1 2 0 0 1 0 0 0 0 0 0 0 11 1 1336.6623 Q9HAV7 Q9HAV7 128 138 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 3 0.016385 98.04 By MS/MS 9 0 1 1 932440 932440 0 3222 2547 3343 7903 5662 5662 1 535140 0 EELALLDGSNVVFK RQKLEAQLTENNIVKEELALLDGSNVVFKL KEELALLDGSNVVFKLLGPVLVKQELGEAR K E E F K L 1 0 1 1 0 0 2 1 0 0 3 1 0 1 0 1 0 0 0 2 0 0 14 0 1532.8086 O15212 O15212 45 58 PFDN6 Prefoldin subunit 6 yes yes 2 1.431E-05 164.81 By MS/MS 10 0 1 1 241000 241000 0 3223 159 3344 7904 5663 5663 1 256160 0 EELAQQYEAILR GPPGGRGEAQRRKEREELAQQYEAILRECG KEREELAQQYEAILRECGHGRFQWTLYFVL R E E L R E 2 1 0 0 0 2 3 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 12 0 1461.7464 Q7L0J3 Q7L0J3 146 157 SV2A Synaptic vesicle glycoprotein 2A yes yes 2 0.0055921 103.22 By MS/MS 1 0 1 1 71846 71846 0 3224 1760 3345 7905 5664 5664 1 3510.2 0 EELEEMLVEK KTVTRDVIGSRWLIKEELEEMLVEKLSDLD RWLIKEELEEMLVEKLSDLDYMQFIRLLEK K E E E K L 0 0 0 0 0 0 5 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 10 0 1247.5955 P82933 P82933 203 212 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.023177 98.582 By MS/MS 7 0 1 1 338270 338270 0 3225 1211 3346 7906 5665 5665 1 6044.9 0 EELEEVIKDI LATVQPGQNFHMFTKEELEEVIKDI_____ HMFTKEELEEVIKDI_______________ K E E D I - 0 0 0 1 0 0 4 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1215.6234 P28066 P28066 232 241 PSMA5 Proteasome subunit alpha type-5 yes yes 2 6.7875E-05 175.91 By MS/MS 8 0 1 1 1484200 1484200 0 3226 712 3347 7907 5666 5666 1 97912 0 EELEFEVPFR TAFKNFIEKVEALTKEELEFEVPFRDLGFN EALTKEELEFEVPFRDLGFNGAPYRSTCLL K E E F R D 0 1 0 0 0 0 4 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 10 0 1293.6241 Q9Y5B9 Q9Y5B9 793 802 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00044336 147.19 By MS/MS 3 0 1 1 286830 286830 0 3227 2968 3348 7908 5667 5667 1 7487.7 0 EELGFRPEYSASQLK MIDRWYHPGCFVKNREELGFRPEYSASQLK EELGFRPEYSASQLKGFSLLATEDKEALKK R E E L K G 1 1 0 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 15 1 1752.8683 P09874 P09874 168 182 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 2.9947E-13 195.77 By MS/MS 3.67 0.471 1 2 3 13056000 13056000 0 3228 521 3349 7909;7910;7911 5668;5669 5669 2 355980 0 EELKLNIR SLPRTLDELGIHLTKEELKLNIRPLLRLVC LGIHLTKEELKLNIRPLLRLVCKKFFGEFT K E E I R P 0 1 1 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 1 1013.5869 Q15029 Q15029 406 413 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 3 0.034906 73.248 By MS/MS 6 0 1 1 623960 623960 0 3229 1466 3350 7912 5670 5670 1 4865.6 0 EELTLEGIR TKKFMRDPIRILVKKEELTLEGIRQFYINV RILVKKEELTLEGIRQFYINVEREEWKLDT K E E I R Q 0 1 0 0 0 0 3 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1058.5608 P60842 P60842 239 247 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 1.4719E-06 190.52 By MS/MS 5.67 2.98 1 1 1 1 1 1 1 1 1 9 512540000 512540000 0 3230 1074 3351 7913;7914;7915;7916;7917;7918;7919;7920;7921 5671;5672;5673;5674;5675;5676;5677;5678;5679 5676 9 8728600 0 EELVAEQALK LLWTCIMNAVEWNKKEELVAEQALKHLKQY EWNKKEELVAEQALKHLKQYAPLLAVFSSQ K E E L K H 2 0 0 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1128.6027 Q9Y6E2 Q9Y6E2 311 320 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.00040831 172.94 By MS/MS 6.5 0.5 1 1 2 6595200 6595200 0 3231 3004 3352 7922;7923 5680 5680 1 84044 0 EEMHLEDSANFIK LRCLALATHDNPLRREEMHLEDSANFIKYE RREEMHLEDSANFIKYETNLTFVGCVGMLD R E E I K Y 1 0 1 1 0 0 3 0 1 1 1 1 1 1 0 1 0 0 0 0 0 0 13 0 1561.7083 P16615 P16615 573 585 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 1.3308E-07 184.24 By MS/MS 4 0.816 1 1 1 3 999660 999660 0 3232 608 3353 7924;7925;7926 5681 5681 1 29230 0 EENAEQQALAAK NKKDELQSERNYLWREENAEQQALAAKRED LWREENAEQQALAAKREDLEKKQQLLRAAT R E E A K R 4 0 1 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 0 1300.6259 Q9UQE7 Q9UQE7 475 486 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.5573E-34 270.54 By MS/MS 3 0.816 1 1 1 3 1082800 1082800 0 3233 2860 3354 7927;7928;7929 5682 5682 1 32232 0 EENLADWYSQVITK QGPKKQTRLGLEAKKEENLADWYSQVITKS KEENLADWYSQVITKSEMIEYHDISGCYIL K E E T K S 1 0 1 1 0 1 2 0 0 1 1 1 0 0 0 1 1 1 1 1 0 0 14 0 1694.8152 P07814 P07814 1021 1034 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 8.2789E-06 169.89 By MS/MS 3.5 0.5 1 1 2 207590 207590 0 3234 493 3355 7930;7931 5683 5683 1 5468.9 0 EEPEPLSPELEYIPR NRTRALQSHSSPEGKEEPEPLSPELEYIPR EEPEPLSPELEYIPRKRGKNPMKAVGLAWY K E E P R K 0 1 0 0 0 0 5 0 0 1 2 0 0 0 4 1 0 0 1 0 0 0 15 0 1796.8832 Q8N490 Q8N490 51 65 PNKD Probable hydrolase PNKD yes yes 2;3 1.2041E-05 146.16 By MS/MS 9.5 0.5 2 2 4 5148700 5148700 0 3235 1914 3356 7932;7933;7934;7935 5684;5685;5686 5685 3 4606000 0 EEPGSDSGTTAVVALIR EEEEEEMMVPGMEGKEEPGSDSGTTAVVAL PGSDSGTTAVVALIRGKQLIVANAGDSRCV K E E I R G 2 1 0 1 0 0 2 2 0 1 1 0 0 0 1 2 2 0 0 2 0 0 17 0 1700.8581 O15355 O15355 321 337 PPM1G Protein phosphatase 1G yes yes 2 0.0061472 101.39 By MS/MS 5 0 1 1 905250 905250 0 3236 170 3357 7936 5687 5687 1 37209 0 EEQHQLAVTAYLK KALEVIKPAHILQEKEEQHQLAVTAYLKNS EKEEQHQLAVTAYLKNSRKEHQRILARRQT K E E L K N 2 0 0 0 0 2 2 0 1 0 2 1 0 0 0 0 1 0 1 1 0 0 13 0 1528.7886 Q14152 Q14152 547 559 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 1.7641E-17 216.06 By MS/MS 3 0 2 2 2178200 2178200 0 3237 1409 3358 7937;7938 5688;5689 5688 2 56861 0 EESFGPIMVISK PTVFTDVEDYMYLAKEESFGPIMVISKFQN LAKEESFGPIMVISKFQNGDIDGVLQRANS K E E S K F 0 0 0 0 0 0 2 1 0 2 0 1 1 1 1 2 0 0 0 1 0 0 12 0 1335.6744 Q3SY69 Q3SY69 824 835 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 2.1288E-05 172.27 By MS/MS 4 0 2 2 1875400 1875400 0 3238 1570 3359;3360 7939;7940 5690;5691 5691 1179 2 51196 0 EESWGPPR PLVKPGGWREKEKAREESWGPPRESRPSEE REKEKAREESWGPPRESRPSEEREWDREKE R E E P R E 0 1 0 0 0 0 2 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 8 0 956.43519 Q14152 Q14152 1186 1193 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.021788 104.45 By MS/MS 3.5 0.5 1 1 2 1750900 1750900 0 3239 1409 3361 7941;7942 5692 5692 1 45812 0 EETQPPVALKK RKNPLPPSVGVVDKKEETQPPVALKKEGIR VDKKEETQPPVALKKEGIRRVGRRPDQQLQ K E E K K E 1 0 0 0 0 1 2 0 0 0 1 2 0 0 2 0 1 0 0 1 0 0 11 1 1238.6871 Q8NC51 Q8NC51 93 103 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.0010437 152.11 By MS/MS 6.5 0.5 1 1 2 4553400 4553400 0 3240 1949 3362 7943;7944 5693 5693 1 36215 0 EEVEDLCRLDK SIHGVKEAVQLVNTREEVEDLCRLDKMIDL VNTREEVEDLCRLDKMIDLIIPRGSSQLVR R E E D K M 0 1 0 2 1 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 11 1 1404.6555 P54886 P54886 540 550 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 2.4822E-28 256.47 By MS/MS 5.5 0.5 1 1 2 2831600 2831600 0 3241 1019 3363 7945;7946 5694 5694 1 69140 0 EEVHGEAQR IPSRYLLLLAAGDPREEVHGEAQRVLRCLP AAGDPREEVHGEAQRVLRCLPGRNRKESTS R E E Q R V 1 1 0 0 0 1 3 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1053.4839 Q5VYK3 Q5VYK3 528 536 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00786 109.48 By MS/MS 2 0 1 1 109590 109590 0 3242 1657 3364 7947 5695 5695 1 5447.1 0 EEVKEAYMGNVLQGGEGQAPTR SIAIQGAIEKAGIPKEEVKEAYMGNVLQGG MGNVLQGGEGQAPTRQAVLGAGLPISTPCT K E E T R Q 2 1 1 0 0 2 4 4 0 0 1 1 1 0 1 0 1 0 1 2 0 0 22 1 2362.1223 P24752 P24752 84 105 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 3 0.00011095 95.591 By MS/MS 7 0 1 1 1561700 1561700 0 3243 680 3365 7948 5696 5696 1 27908 0 EEVQLTSK ELELKEEIKKKKGIKEEVQLTSKQKEMLQA KKKKGIKEEVQLTSKQKEMLQAQLDREAQV K E E S K Q 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 8 0 932.48148 Q92616 Q92616 822 829 GCN1L1 Translational activator GCN1 yes yes 2 0.031717 98.523 By MS/MS 2 0 1 1 341350 341350 0 3244 2068 3366 7949 5697 5697 1 16967 0 EEVTELLAR ITEHELVPEHVVMTKEEVTELLARYKLREN HVVMTKEEVTELLARYKLRENQLPRIQAGD K E E A R Y 1 1 0 0 0 0 3 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1058.5608 P19388 P19388 154 162 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 0.00010493 170.3 By MS/MS 8.5 0.5 1 1 2 2820000 2820000 0 3245 632 3367 7950;7951 5698 5698 1 239240 0 EEYPDRIMNTFSVVPSPK GTGSGMGTLLISKIREEYPDRIMNTFSVVP PDRIMNTFSVVPSPKVSDTVVEPYNATLSV R E E P K V 0 1 1 1 0 0 2 0 0 1 0 1 1 1 3 2 1 0 1 2 0 0 18 1 2108.0248 P07437;P68371;Q13509 P68371 157 174 TUBB;TUBB4B;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain no no 3 0.0033732 89.484 By MS/MS 6 0 1 1 2280000 2280000 0 3246 1187;490;1377 3368 7952 5699 5699 1 17779 0 EFAGEDTSDLFLEER PAFKEHLRDFLVQIKEFAGEDTSDLFLEER EFAGEDTSDLFLEEREIALRQADEEKHKRQ K E F E R E 1 1 0 2 0 0 4 1 0 0 2 0 0 2 0 1 1 0 0 0 0 0 15 0 1756.7792 O14980 O14980 1024 1038 XPO1 Exportin-1 yes yes 2 1.7238E-30 295.34 By MS/MS 4.5 0.5 1 1 2 3670700 3670700 0 3247 142 3369 7953;7954 5700 5700 1 101570 0 EFDELNPSAQR FGQDEDVTSKAFTGREFDELNPSAQRDACL FTGREFDELNPSAQRDACLNARCFARVEPS R E F Q R D 1 1 1 1 0 1 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1304.5997 P16615 P16615 656 666 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 6.2121E-22 236.35 By MS/MS 3 1.41 1 1 1 1 1 5 15549000 15549000 0 3248 608 3370 7955;7956;7957;7958;7959 5701;5702;5703;5704;5705;5706 5701 6 563370 0 EFEEESKQPGVSEQQR DISSSLNSLADSNAREFEEESKQPGVSEQQ FEEESKQPGVSEQQRHQLKHRELFLSRQFE R E F Q R H 0 1 0 0 0 3 5 1 0 0 0 1 0 1 1 2 0 0 0 1 0 0 16 1 1905.8704 O94776 O94776 65 80 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.010865 78.191 By MS/MS 5 0 1 1 1906200 1906200 0 3249 349 3371 7960 5707 5707 1 78352 0 EFEFSQLPLK DSSSTAPAQLGKKGKEFEFSQLPLKVEFLE GKKGKEFEFSQLPLKVEFLECSAKGGRGDV K E F L K V 0 0 0 0 0 1 2 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 10 0 1236.639 Q9Y5M8 Q9Y5M8 231 240 SRPRB Signal recognition particle receptor subunit beta yes yes 2 1.1763E-06 208.37 By MS/MS 8.5 0.5 1 1 2 1669100 1669100 0 3250 2976 3372 7961;7962 5708 5708 1 183310 0 EFEFSQLPLKVEFLECSAK DSSSTAPAQLGKKGKEFEFSQLPLKVEFLE SQLPLKVEFLECSAKGGRGDVGSADIQDLE K E F A K G 1 0 0 0 1 1 4 0 0 0 3 2 0 3 1 2 0 0 0 1 0 0 19 1 2300.1399 Q9Y5M8 Q9Y5M8 231 249 SRPRB Signal recognition particle receptor subunit beta yes yes 3 0.04353 53.779 By MS/MS 6 0 1 1 48485 0 48485 3251 2976 3373 7963 5709 5709 1 0 148700 EFEKDKDDDEVFEK VTVNFRKLLLNRCQKEFEKDKDDDEVFEKK KEFEKDKDDDEVFEKKQKEMDEAATAEERG K E F E K K 0 0 0 4 0 0 4 0 0 0 0 3 0 2 0 0 0 0 0 1 0 0 14 2 1771.7788 Q04637 Q04637 850 863 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.015132 80.905 By MS/MS 2 0.816 1 1 1 3 1331200 1331200 0 3252 1264 3374 7964;7965;7966 5710 5710 1 59214 0 EFEPLLNWMK DESEKTKESREAVEKEFEPLLNWMKDKALK EAVEKEFEPLLNWMKDKALKDKIEKAVVSQ K E F M K D 0 0 1 0 0 0 2 0 0 0 2 1 1 1 1 0 0 1 0 0 0 0 10 0 1305.6427 P14625 P14625 614 623 HSP90B1 Endoplasmin yes yes 2 0.0033767 107.66 By MS/MS 4 0 1 1 113720 113720 0 3253 589 3375 7967 5711 5711 378 1 3104.3 0 EFESAIVEAAR GLHMTKGLALWEAYREFESAIVEAARLEKV EAYREFESAIVEAARLEKVHSLFRRQLAIP R E F A R L 3 1 0 0 0 0 3 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 11 0 1220.6037 Q15020 Q15020 233 243 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 2 3.1666E-07 190.02 By MS/MS 3.5 0.5 1 1 2 770710 770710 0 3254 1463 3376 7968;7969 5712 5712 1 20298 0 EFFNGKEPSR VGGSTRIPKIQQLVKEFFNGKEPSRGINPD QQLVKEFFNGKEPSRGINPDEAVAYGAAVQ K E F S R G 0 1 1 0 0 0 2 1 0 0 0 1 0 2 1 1 0 0 0 0 0 0 10 1 1209.5778 P11021 P11021 377 386 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.014363 131.12 By MS/MS 5 0 1 1 0 0 0 3255 545 3377 7970 5713 5713 1 0 0 EFGEPWDLNSGDGAFYGPK CLWDQAEQVLKQALKEFGEPWDLNSGDGAF PWDLNSGDGAFYGPKIDVHLHDALGRPHQC K E F P K I 1 0 1 2 0 0 2 4 0 0 1 1 0 2 2 1 0 1 1 0 0 0 19 0 2084.9116 Q9BW92 Q9BW92 521 539 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 2.2395E-07 145.61 By MS/MS 5.5 0.5 1 1 2 1045700 1045700 0 3256 2391 3378 7971;7972 5714 5714 1 14111 0 EFGFSGLNVK KNQSETLNWLSNAIKEFGFSGLNVKAFISN SNAIKEFGFSGLNVKAFISNVKTALAATNP K E F V K A 0 0 1 0 0 0 1 2 0 0 1 1 0 2 0 1 0 0 0 1 0 0 10 0 1096.5553 Q14008 Q14008 745 754 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.056868 90.709 By MS/MS 2.5 0.5 1 1 2 409530 409530 0 3257 1405 3379 7973;7974 5715 5715 1 14497 0 EFGPVVIDYGK IRKARGTFDNAETKKEFGPVVIDYGKVQSK ETKKEFGPVVIDYGKVQSKVNLKYDSWHKE K E F G K V 0 0 0 1 0 0 1 2 0 1 0 1 0 1 1 0 0 0 1 2 0 0 11 0 1222.6234 Q14204 Q14204 1101 1111 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.013096 95.573 By MS/MS 2 0.816 1 1 1 3 987550 987550 0 3258 1421 3380 7975;7976;7977 5716 5716 1 44567 0 EFGTEFTDHYIEVVK ASSHQVTLLDFGASREFGTEFTDHYIEVVK EFGTEFTDHYIEVVKAAADGDRDCVLQKSR R E F V K A 0 0 0 1 0 0 3 1 1 1 0 1 0 2 0 0 2 0 1 2 0 0 15 0 1812.857 Q96D53 Q96D53 392 406 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.00023388 150.09 By MS/MS 6 0 1 1 2400400 2400400 0 3259 2147 3381 7978 5717 5717 1 18719 0 EFHGLGDCIIK RTRLAADVGKGAAQREFHGLGDCIIKIFKS AAQREFHGLGDCIIKIFKSDGLRGLYQGFN R E F I K I 0 0 0 1 1 0 1 2 1 2 1 1 0 1 0 0 0 0 0 0 0 0 11 0 1287.6282 P12235 P12235 153 163 SLC25A4 ADP/ATP translocase 1 yes yes 2;3 7.1327E-05 166.16 By MS/MS 5.29 3.24 2 1 1 2 1 7 9938100 9938100 0 3260 562 3382 7979;7980;7981;7982;7983;7984;7985 5718;5719;5720;5721;5722 5721 5 655950 0 EFHLNESGDPSSK YFDENPYFENKVLSKEFHLNESGDPSSKST SKEFHLNESGDPSSKSTEIKWKSGKDLTKR K E F S K S 0 0 1 1 0 0 2 1 1 0 1 1 0 1 1 3 0 0 0 0 0 0 13 0 1445.6423 Q01105;P0DME0 Q01105 155 167 SET;SETSIP Protein SET;Protein SETSIP yes no 2 1.4435E-07 210.44 By MS/MS 7 0 1 1 857810 857810 0 3261 527 3383 7986 5723 5723 1 15329 0 EFIEMWR TISSSKDEDPLAATREFIEMWRLLGREVPE EDPLAATREFIEMWRLLGREVPEHITEEEL R E F W R L 0 1 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 7 0 1009.4691 Q7L0Y3 Q7L0Y3 96 102 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.013079 128.82 By MS/MS 7 0 1 1 1284200 1284200 0 3262 1761 3384 7987 5724 5724 1241 1 22950 0 EFIQEPAK FDFLCMPVFHPRFKREFIQEPAKNRPGPQT FHPRFKREFIQEPAKNRPGPQTRSDLLLSG R E F A K N 1 0 0 0 0 1 2 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 8 0 960.49165 O14744 O14744 53 60 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0080258 125.81 By MS/MS 5 0 1 1 5638100 5638100 0 3263 125 3385 7988 5725 5725 1 231750 0 EFIYYADVK VDDSQSFQNLSNWKKEFIYYADVKEPESFP LSNWKKEFIYYADVKEPESFPFVILGNKID K E F V K E 1 0 0 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 9 0 1146.5597 P51151;Q9NP90 P51151 104 112 RAB9A;RAB9B Ras-related protein Rab-9A;Ras-related protein Rab-9B no no 2 0.01017 104.44 By MS/MS 9 0 1 1 213280 213280 0 3264 961;2577 3386 7989 5726 5726 1 122400 0 EFLEFRK YPALTEVMNKLRENKEFLEFRKARSDMLLS MNKLRENKEFLEFRKARSDMLLSRKNQLLL K E F R K A 0 1 0 0 0 0 2 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 7 1 967.51272 O75323 O75323 149 155 GBAS Protein NipSnap homolog 2 yes yes 2 0.031962 154.09 By MS/MS 8 0 1 1 7827100 7827100 0 3265 296 3387 7990 5727 5727 1 516350 0 EFLHAQEEVKR VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI NLKKEFLHAQEEVKRIQSIPLVIGQFLEAV K E F K R I 1 1 0 0 0 1 3 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 11 1 1384.7099 P43686 P43686 71 81 PSMC4 26S protease regulatory subunit 6B yes yes 2;3 0.0003951 161.51 By MS/MS 6.75 0.829 2 1 1 4 13455000 13455000 0 3266 867 3388 7991;7992;7993;7994 5728;5729 5729 2 137050 0 EFLPEGQDIGAFVAEQK KKVGTLWREAGLSWKEFLPEGQDIGAFVAE LPEGQDIGAFVAEQKVEYTLGEESEAPGQR K E F Q K V 2 0 0 1 0 2 3 2 0 1 1 1 0 2 1 0 0 0 0 1 0 0 17 0 1876.9207 Q04637 Q04637 1405 1421 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 4.114E-33 266.85 By MS/MS 3.57 1.4 2 2 1 1 1 7 5918000 5918000 0 3267 1264 3389 7995;7996;7997;7998;7999;8000;8001 5730;5731;5732;5733;5734 5730 5 228060 0 EFLVAGGEDFK EAPATINSASLHPEKEFLVAGGEDFKLYKY HPEKEFLVAGGEDFKLYKYDYNSGEELESY K E F F K L 1 0 0 1 0 0 2 2 0 0 1 1 0 2 0 0 0 0 0 1 0 0 11 0 1210.587 Q9Y3F4 Q9Y3F4 236 246 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 0.0010385 133.13 By MS/MS 7.5 0.5 1 1 2 5764000 5764000 0 3268 2937 3390 8002;8003 5735;5736 5735 2 144770 0 EFLVLQEIFR FNMFDTDGNEMVDKKEFLVLQEIFRKKNEK MVDKKEFLVLQEIFRKKNEKREIKGDEEKR K E F F R K 0 1 0 0 0 1 2 0 0 1 2 0 0 2 0 0 0 0 0 1 0 0 10 0 1292.7129 Q86XE3 Q86XE3 256 265 MICU3 Calcium uptake protein 3, mitochondrial yes yes 2 0.0066465 134.25 By MS/MS 6 0 1 1 53559 53559 0 3269 1839 3391 8004 5737 5737 0 417.66 0 EFLVPSREPGK IETPTLFKRTPGGAKEFLVPSREPGKFYSL GGAKEFLVPSREPGKFYSLPQSPQQFKQLL K E F G K F 0 1 0 0 0 0 2 1 0 0 1 1 0 1 2 1 0 0 0 1 0 0 11 1 1257.6717 Q6PI48 Q6PI48 225 235 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.015796 121.6 By MS/MS 5 0 1 1 1125700 1125700 0 3270 1715 3392 8005 5738 5738 1 46271 0 EFNPTKPLLSVNK VAEQVKKSTLNPNAKEFNPTKPLLSVNKST AKEFNPTKPLLSVNKSTSTPTSPGPRTHST K E F N K S 0 0 2 0 0 0 1 0 0 0 2 2 0 1 2 1 1 0 0 1 0 0 13 1 1485.8191 Q8WWM7 Q8WWM7 665 677 ATXN2L Ataxin-2-like protein yes yes 2 0.021237 115 By MS/MS 3 0 1 1 742530 742530 0 3271 2041 3393 8006 5739 5739 1 19384 0 EFPVISVVGYTNCGK LRKKRHLLRRQRTRREFPVISVVGYTNCGK EFPVISVVGYTNCGKTTLIKALTGDAAIQP R E F G K T 0 0 1 0 1 0 1 2 0 1 0 1 0 1 1 1 1 0 1 3 0 0 15 0 1668.8181 O43824 O43824 293 307 GTPBP6 Putative GTP-binding protein 6 yes yes 2 3.0658E-07 202 By MS/MS 6.5 0.5 1 1 2 2122800 2122800 0 3272 228 3394 8007;8008 5740 5740 1 17715 0 EFQAPIGSEEGLR ISNYYDNHLKQQLAKEFQAPIGSEEGLRLL AKEFQAPIGSEEGLRLLEDPERRQVRSGAR K E F L R L 1 1 0 0 0 1 3 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1431.6994 Q9NVH0 Q9NVH0 480 492 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 0.01381 98.105 By MS/MS 5 0 1 1 1891100 1891100 0 3273 2651 3395 8009 5741 5741 1 77732 0 EFQITCGPDSFATDPSK PSTVVPAQTPWDKPREFQITCGPDSFATDP QITCGPDSFATDPSKQTTISVSFLLPDITD R E F S K Q 1 0 0 2 1 1 1 1 0 1 0 1 0 2 2 2 2 0 0 0 0 0 17 0 1898.8356 Q5JRX3 Q5JRX3 308 324 PITRM1 Presequence protease, mitochondrial yes yes 2 1.2192E-116 364.3 By MS/MS 4.5 0.5 1 1 2 1310200 1310200 0 3274 1606 3396 8010;8011 5742 5742 1 38235 0 EFQLDLDEIENDNGTVR RSMSGHPEAAQMVRREFQLDLDEIENDNGT QLDLDEIENDNGTVRCEMPELVQHKLDDIF R E F V R C 0 1 2 3 0 1 3 1 0 1 2 0 0 1 0 0 1 0 0 1 0 0 17 0 2005.9229 Q14008 Q14008 1483 1499 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.3895E-25 228.17 By MS/MS 2 0 1 1 127820 127820 0 3275 1405 3397 8012 5743;5744;5745 5744 3 6353.1 0 EFQQYLPVVMGPLMK YMISAWARMCKILGKEFQQYLPVVMGPLMK EFQQYLPVVMGPLMKTASIKPEVALLDTQD K E F M K T 0 0 0 0 0 2 1 1 0 0 2 1 2 1 2 0 0 0 1 2 0 0 15 0 1778.9099 O00410 O00410 618 632 IPO5 Importin-5 yes yes 2 8.2163E-08 165.63 By MS/MS 4 0 1 1 458880 458880 0 3276 91 3398 8013 5746 5746 55;56 1 12527 0 EFRGLGDCLVK RTRLAADVGKAGAEREFRGLGDCLVKIYKS GAEREFRGLGDCLVKIYKSDGIKGLYQGFN R E F V K I 0 1 0 1 1 0 1 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 1 1292.6547 P05141;P12236 P05141 153 163 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 1.9898E-15 226.09 By MS/MS By matching 5.86 3.44 1 1 1 2 1 1 6 1 19663000 19631000 32041 3277 469;563 3399 8014;8015;8016;8017;8018;8019;8020 5747;5748;5749 5748 3 1745400 273350 EFSEIQLAR KALYNRLVPLVNGVREFSEIQLARLKKLGI LVNGVREFSEIQLARLKKLGINKTDPSTLT R E F A R L 1 1 0 0 0 1 2 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1091.5611 Q6UB35 Q6UB35 531 539 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0065163 112.41 By MS/MS 4.5 0.5 1 1 2 14727000 14727000 0 3278 1726 3400 8021;8022 5750;5751 5750 2 415330 0 EFSITEFSEGAK RTRIKAFLIWAYFDKEFSITEFSEGAKQAF FDKEFSITEFSEGAKQAFAHVSKLLSQCKF K E F A K Q 1 0 0 0 0 0 3 1 0 1 0 1 0 2 0 2 1 0 0 0 0 0 12 0 1343.6245 Q8WWC4 Q8WWC4 138 149 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 4.1173E-05 167.93 By MS/MS 9 0 1 1 1051300 1051300 0 3279 2037 3401 8023 5752 5752 1 603380 0 EFSPEEGLYYNK ICAQAHCGAGDELKREFSPEEGLYYNKAID LKREFSPEEGLYYNKAIDYYLKALRSLGTR R E F N K A 0 0 1 0 0 0 3 1 0 0 1 1 0 1 1 1 0 0 2 0 0 0 12 0 1474.6616 Q3B7T1 Q3B7T1 927 938 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.00013987 160.36 By MS/MS 3 0 1 1 677240 677240 0 3280 1566 3402 8024 5753 5753 1 17679 0 EFSPFGSITSAK IKNLDDTIDDEKLRKEFSPFGSITSAKVML LRKEFSPFGSITSAKVMLEDGRSKGFGFVC K E F A K V 1 0 0 0 0 0 1 1 0 1 0 1 0 2 1 3 1 0 0 0 0 0 12 0 1269.6241 Q13310 Q13310 313 324 PABPC4 Polyadenylate-binding protein 4 yes yes 2 0.0020085 121.83 By MS/MS 5.5 0.5 1 1 2 3641800 3641800 0 3281 1353 3403 8025;8026 5754 5754 1 138220 0 EFSPFGTITSAK VKNLDDGIDDERLRKEFSPFGTITSAKVMM LRKEFSPFGTITSAKVMMEGGRSKGFGFVC K E F A K V 1 0 0 0 0 0 1 1 0 1 0 1 0 2 1 2 2 0 0 0 0 0 12 0 1283.6398 P11940 P11940 313 324 PABPC1 Polyadenylate-binding protein 1 yes yes 2 0.0010879 132.32 By MS/MS 5.5 0.5 1 1 2 7095300 7095300 0 3282 560 3404 8027;8028 5755 5755 1 261070 0 EFTAQNLGK LLIAGQINTYCQNIKEFTAQNLGKLFMAQA YCQNIKEFTAQNLGKLFMAQALQEYNN___ K E F G K L 1 0 1 0 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1006.5084 O15372 O15372 332 340 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 6.4333E-05 183.74 By MS/MS By matching 7 0 2 1 1 20690000 20619000 70983 3283 173 3405 8029;8030 5756 5756 1 368460 291400 EFTEAVEAK LILDDVSLTHLTFGKEFTEAVEAKQVAQQE HLTFGKEFTEAVEAKQVAQQEAERARFVVE K E F A K Q 2 0 0 0 0 0 3 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 9 0 1022.492 P35232 P35232 178 186 PHB Prohibitin yes yes 2 0.00786 109.48 By MS/MS By matching 8.75 0.829 2 1 1 3 1 10193000 10093000 99665 3284 782 3406 8031;8032;8033;8034 5757 5757 1 815970 850260 EFTLEFSR RANACNSVIKQLMKKEFTLEFSRDRKSMSV IKQLMKKEFTLEFSRDRKSMSVYCTPNKPS K E F S R D 0 1 0 0 0 0 2 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 8 0 1027.4975 P16615;O14983;Q93084 P16615 482 489 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 0.0072772 128.61 By MS/MS By matching 3.83 1.57 1 1 2 1 1 5 1 11944000 11910000 33690 3285 608 3407 8035;8036;8037;8038;8039;8040 5758;5759;5760 5758 3 383840 70397 EFTQGVKPDWTIAR VETKQLLSASYEFQREFTQGVKPDWTIARI REFTQGVKPDWTIARIEHSKLLE_______ R E F A R I 1 1 0 1 0 1 1 1 0 1 0 1 0 1 1 0 2 1 0 1 0 0 14 1 1646.8417 Q8WWC4 Q8WWC4 270 283 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 7.5815E-05 168.22 By MS/MS 9.5 0.5 1 1 2 1265700 1265700 0 3286 2037 3408 8041;8042 5761 5761 1 741190 0 EFTVNIMDTCER FMELTFNQAAKGVNKEFTVNIMDTCERCNG VNKEFTVNIMDTCERCNGKGNEPGTKVQHC K E F E R C 0 1 1 1 1 0 2 0 0 1 0 0 1 1 0 0 2 0 0 1 0 0 12 0 1513.6541 Q96EY1 Q96EY1 227 238 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 2.7781E-44 284.47 By MS/MS 7 0 2 2 2684100 2684100 0 3287 2169 3409;3410 8043;8044 5762;5763 5762 1395 2 47966 0 EFVAQNNTVQIK EKRKVAALEIEKLVREFVAQNNTVQIKHVI LVREFVAQNNTVQIKHVIQTLSQEFALSQH R E F I K H 1 0 2 0 0 2 1 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 12 0 1389.7252 Q08AM6 Q08AM6 39 50 VAC14 Protein VAC14 homolog yes yes 2 7.9356E-34 269.33 By MS/MS 5 0 1 1 2129600 2129600 0 3288 1294 3411 8045 5764 5764 1 87535 0 EFVFENVK RMENDFLPSLELSRREFVFENVKFRQLQKE SLELSRREFVFENVKFRQLQKEKFQISNNG R E F V K F 0 0 1 0 0 0 2 0 0 0 0 1 0 2 0 0 0 0 0 2 0 0 8 0 1010.5073 Q01968 Q01968 571 578 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 0.05144 90.777 By MS/MS 3.5 0.5 1 1 2 988160 988160 0 3289 1248 3412 8046;8047 5765 5765 1 26895 0 EFVVIAPAAHSDAVLSESK FPPRAHCLVRWYGLREFVVIAPAAHSDAVL IAPAAHSDAVLSESKCNLLLSSVSIALGNT R E F S K C 4 0 0 1 0 0 2 0 1 1 1 1 0 1 1 3 0 0 0 3 0 0 19 0 1969.0157 Q15042 Q15042 126 144 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 3 0.0083366 73.168 By MS/MS 3 0 1 1 1685900 1685900 0 3290 1469 3413 8048 5766 5766 1 44011 0 EFYSEILDK SKRLKKVWKPQLFEREFYSEILDKKFTVTV PQLFEREFYSEILDKKFTVTVTMRTLDLID R E F D K K 0 0 0 1 0 0 2 0 0 1 1 1 0 1 0 1 0 0 1 0 0 0 9 0 1142.5496 Q13084 Q13084 113 121 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.0061292 113.26 By MS/MS 8.5 0.5 1 1 2 1370400 1370400 0 3291 1331 3414 8049;8050 5767 5767 1 122440 0 EFYSEILDKK SKRLKKVWKPQLFEREFYSEILDKKFTVTV QLFEREFYSEILDKKFTVTVTMRTLDLIDE R E F K K F 0 0 0 1 0 0 2 0 0 1 1 2 0 1 0 1 0 0 1 0 0 0 10 1 1270.6445 Q13084 Q13084 113 122 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.00029764 168.25 By MS/MS 8 0 1 1 2542100 2542100 0 3292 1331 3415 8051 5768 5768 1 167700 0 EGAAVIDVGINR SAAGIPNLITADMIKEGAAVIDVGINRVHD MIKEGAAVIDVGINRVHDPVTAKPKLVGDV K E G N R V 2 1 1 1 0 0 1 2 0 2 0 0 0 0 0 0 0 0 0 2 0 0 12 0 1212.6463 P13995 P13995 267 278 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 2 2.3126E-16 215.06 By MS/MS 8 0 1 1 7102900 7102900 0 3293 585 3416 8052 5769 5769 1 468580 0 EGAGAVDEEDFIK RLGSSTLGSKSSAAKEGAGAVDEEDFIKAF AKEGAGAVDEEDFIKAFDDVPVVQIYSSRD K E G I K A 2 0 0 2 0 0 3 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 13 0 1378.6252 Q7Z460 Q7Z460 292 304 CLASP1 CLIP-associating protein 1 yes yes 2 1.8773E-07 179.57 By MS/MS 3 0 1 1 604240 604240 0 3294 1790 3417 8053 5770 5770 1 15774 0 EGAITFTWVER QQPGTFLLRFSESSREGAITFTWVERSQNG ESSREGAITFTWVERSQNGGEPDFHAVEPY R E G E R S 1 1 0 0 0 0 2 1 0 1 0 0 0 1 0 0 2 1 0 1 0 0 11 0 1307.651 P42224 P42224 609 619 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 0.040334 88.134 By MS/MS 5 0 1 1 230900 230900 0 3295 847 3418 8054 5771 5771 1 9490.9 0 EGALCEENMR EIKDSVVAGFQWATKEGALCEENMRGVRFD QWATKEGALCEENMRGVRFDVHDVTLHADA K E G M R G 1 1 1 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1207.4962 P13639 P13639 689 698 EEF2 Elongation factor 2 yes yes 2 9.8673E-22 243.03 By MS/MS 4.12 2.09 1 1 1 2 1 1 1 8 13520000 13520000 0 3296 576 3419;3420 8055;8056;8057;8058;8059;8060;8061;8062 5772;5773;5774 5772 363 3 380840 0 EGALDLSGLR GEDSARETPIGLVPKEGALDLSGLRAIDTT GLVPKEGALDLSGLRAIDTTQLFSLPKDFW K E G L R A 1 1 0 1 0 0 1 2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1029.5455 Q16822 Q16822 579 588 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.0006056 157.99 By MS/MS 6.67 1.7 1 1 1 3 6935500 6935500 0 3297 1550 3421 8063;8064;8065 5775;5776;5777 5775 3 285080 0 EGALGFFK RYKGLMDCAKQVLQKEGALGFFKGLSPSLL AKQVLQKEGALGFFKGLSPSLLKAALSTGF K E G F K G 1 0 0 0 0 0 1 2 0 0 1 1 0 2 0 0 0 0 0 0 0 0 8 0 867.44905 Q9HC21 Q9HC21 276 283 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.043217 94.006 By MS/MS 8 0 1 1 2137200 2137200 0 3298 2556 3422 8066 5778 5778 1 140990 0 EGATLVYGGR AHLEKLLQYCETGVKEGATLVYGGRQVQRP ETGVKEGATLVYGGRQVQRPGFFMEPTVFT K E G G R Q 1 1 0 0 0 0 1 3 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1021.5193 Q3SY69 Q3SY69 789 798 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 9.2367E-06 175.91 By MS/MS 4.5 0.5 1 1 2 2288200 2288200 0 3299 1570 3423 8067;8068 5779 5779 1 64306 0 EGATVYATGTHAQVEDGR PRVIRCMTNTPVVVREGATVYATGTHAQVE TVYATGTHAQVEDGRLMEQLLSSVGFCTEV R E G G R L 3 1 0 1 0 1 2 3 1 0 0 0 0 0 0 0 3 0 1 2 0 0 18 0 1860.8602 P32322 P32322 130 147 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2;3 1.0805E-33 215.51 By MS/MS By matching 8.4 0.49 3 2 4 1 35187000 35060000 127150 3300 764 3424 8069;8070;8071;8072;8073 5780;5781 5781 1 2564500 1084800 EGCTVSPETISLNVK ALRHEIELRMRKNVKEGCTVSPETISLNVK EGCTVSPETISLNVKGPGLQRMVLVDLPGV K E G V K G 0 0 1 0 1 0 2 1 0 1 1 1 0 0 1 2 2 0 0 2 0 0 15 0 1632.8029 O60313 O60313 373 387 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 2.443E-07 168.83 By MS/MS 4.5 0.5 1 1 2 1185400 1185400 0 3301 244 3425 8074;8075 5782 5782 1 39619 0 EGDLLFTVAK LQGHERSITQIKYNREGDLLFTVAKDPIVN IKYNREGDLLFTVAKDPIVNVWYSVNGERL R E G A K D 1 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1091.5863 Q13347 Q13347 21 30 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.00048071 145.72 By MS/MS 8.33 1.25 1 1 1 3 7285400 7285400 0 3302 1358 3426 8076;8077;8078 5783;5784 5783 2 408440 0 EGDLTNLLQNQAVK EKTADKLQEFLQTLREGDLTNLLQNQAVKG REGDLTNLLQNQAVKGKVAGALLRAIFKGS R E G V K G 1 0 2 1 0 2 1 1 0 0 3 1 0 0 0 0 1 0 0 1 0 0 14 0 1541.8049 Q9NVI1 Q9NVI1 26 39 FANCI Fanconi anemia group I protein yes yes 2 3.6462E-59 296.14 By MS/MS 3.5 0.5 1 1 2 2648200 2648200 0 3303 2654 3427 8079;8080 5785 5785 1 69578 0 EGDPGTIFFFR DAANILVMGVENSAKEGDPGTIFFFREGAA NSAKEGDPGTIFFFREGAAVFWNVKDKTMK K E G F R E 0 1 0 1 0 0 1 2 0 1 0 0 0 3 1 0 1 0 0 0 0 0 11 0 1284.6139 Q9NWS8 Q9NWS8 220 230 RMND1 Required for meiotic nuclear division protein 1 homolog yes yes 2 0.00056477 140.11 By MS/MS 7.5 0.5 1 1 2 1180700 1180700 0 3304 2668 3428 8081;8082 5786 5786 1 75535 0 EGDQTSNNIPADIVFVLK VKKGWKEGTKITFPKEGDQTSNNIPADIVF QTSNNIPADIVFVLKDKPHNIFKRDGSDVI K E G L K D 1 0 2 2 0 1 1 1 0 2 1 1 0 1 1 1 1 0 0 2 0 0 18 0 1958.9949 P25685 P25685 223 240 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.00051921 119.25 By MS/MS 8 0.816 1 1 1 3 1921500 1921500 0 3305 686 3429 8083;8084;8085 5787;5788 5788 2 94437 0 EGDVLTLLESER DTSRSIIRNVKGPVREGDVLTLLESEREAR PVREGDVLTLLESEREARRLR_________ R E G E R E 0 1 0 1 0 0 3 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1359.6882 P62857 P62857 52 63 RPS28 40S ribosomal protein S28 yes yes 2 4.3369E-18 232.88 By MS/MS By MS/MS 10 0 2 1 1 6191800 6063100 128680 3306 1152 3430 8086;8087 5789;5790 5790 2 6444400 3300600 EGDYVLFHHEGGVDVGDVDAK HSQAEEFYVCIYATREGDYVLFHHEGGVDV FHHEGGVDVGDVDAKAQKLLVGVDEKLNPE R E G A K A 1 0 0 4 0 0 2 4 2 0 1 1 0 1 0 0 0 0 1 4 0 0 21 0 2257.0287 P53396 P53396 128 148 ACLY ATP-citrate synthase yes yes 3 0.00038412 79.467 By MS/MS 4 0 1 1 1164600 1164600 0 3307 1001 3431 8088 5791 5791 1 31791 0 EGEEAGPGDPLLEAVPK DSGLWVPNSKASEAKEGEEAGPGDPLLEAV EEAGPGDPLLEAVPKTGDEKDVSV______ K E G P K T 2 0 0 1 0 0 4 3 0 0 2 1 0 0 3 0 0 0 0 1 0 0 17 0 1706.8363 Q16543 Q16543 353 369 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 2 1.4896E-10 179.67 By MS/MS 6.5 0.5 1 1 2 2751800 2751800 0 3308 1539 3432 8089;8090 5792;5793 5792 2 27856 0 EGEEEQAINR KLVPDLLAIVQRKKKEGEEEQAINRQTALY QRKKKEGEEEQAINRQTALYTLKLLCKNFG K E G N R Q 1 1 1 0 0 1 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 10 0 1173.5262 Q9H583 Q9H583 1658 1667 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 6.6408E-05 169.44 By MS/MS 1.5 0.5 1 1 2 742920 742920 0 3309 2503 3433 8091;8092 5794 5794 1 36830 0 EGEEQPVLPEETESSKPGPSAHDLAAQLK ANLKNVMNMQNRQKKEGEEQPVLPEETESS SKPGPSAHDLAAQLKSSLLAEIGLTESEGP K E G L K S 3 0 0 1 0 2 6 2 1 0 3 2 0 0 4 3 1 0 0 1 0 0 29 1 3072.4888 O95071 O95071 2121 2149 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 4 0.04751 33.265 By MS/MS 3.5 0.5 1 1 2 790120 790120 0 3310 364 3434 8093;8094 5795 5795 1 20898 0 EGELLCGVLDK GFNPDSMCESQVIIREGELLCGVLDKAHYG VIIREGELLCGVLDKAHYGSSAYGLVHCCY R E G D K A 0 0 0 1 1 0 2 2 0 0 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1231.6118 O95602 O95602 741 751 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.00047013 143.96 By MS/MS 3 0.816 1 1 1 3 872640 872640 0 3311 401 3435 8095;8096;8097 5796 5796 1 26589 0 EGFTQASLGLLANQR AVICTNGRRHLNIAKEGFTQASLGLLANQR EGFTQASLGLLANQRKRQLLIGLLKSLRTI K E G Q R K 2 1 1 0 0 2 1 2 0 0 3 0 0 1 0 1 1 0 0 0 0 0 15 0 1603.8318 Q96JG6 Q96JG6 148 162 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 6.2569E-22 195.72 By MS/MS 4 0 1 1 0 0 0 3312 2208 3436 8098 5797 5797 1 0 0 EGFVEYTEQVVK STACQMLVCYAKELKEGFVEYTEQVVKLMV ELKEGFVEYTEQVVKLMVPLLKFYFHDGVR K E G V K L 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 0 1 0 1 3 0 0 12 0 1426.698 O00410 O00410 694 705 IPO5 Importin-5 no no 2 1.0836E-34 270.63 By MS/MS 5.5 1.12 1 1 1 1 4 8861200 8861200 0 3313 91 3437 8099;8100;8101;8102 5798;5799 5798 2 225180 0 EGGAGAVDEDDFIK KPGSAGGPKVGGASKEGGAGAVDEDDFIKA KEGGAGAVDEDDFIKAFTDVPSIQIYSSRE K E G I K A 2 0 0 3 0 0 2 3 0 1 0 1 0 1 0 0 0 0 0 1 0 0 14 0 1421.6311 O75122 O75122 59 72 CLASP2 CLIP-associating protein 2 yes yes 2 1.15E-05 167.18 By MS/MS 3.5 1.12 1 1 1 1 4 2064200 2064200 0 3314 279 3438 8103;8104;8105;8106 5800 5800 1 58291 0 EGGAGGGFGSPMDIFDMFFGGGGR KKRELYDKGGEQAIKEGGAGGGFGSPMDIF SPMDIFDMFFGGGGRMQRERRGKNVVHQLS K E G G R M 1 1 0 2 0 0 1 10 0 1 0 0 2 4 1 1 0 0 0 0 0 0 24 0 2321.9834 P31689 P31689 74 97 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.00091848 70.197 By MS/MS 6 0 1 1 119830 119830 0 3315 755 3439 8107 5801;5802;5803 5802 508;509 3 934.45 0 EGGGDEPLNFLDPK EQRKLARQRSRAWLKEGGGDEPLNFLDPKV KEGGGDEPLNFLDPKVAQRVLATQPGPGRG K E G P K V 0 0 1 2 0 0 2 3 0 0 2 1 0 1 2 0 0 0 0 0 0 0 14 0 1486.694 Q5JTH9 Q5JTH9 1111 1124 RRP12 RRP12-like protein yes yes 2 0.00557 101.56 By MS/MS 3 0 1 1 166920 166920 0 3316 1609 3440 8108 5804 5804 1 4357.6 0 EGGGNNLYGEEMVQALKQLK EALAAPSRFVLKPQREGGGNNLYGEEMVQA NLYGEEMVQALKQLKDSEERASYILMEKIE R E G L K D 1 0 2 0 0 2 3 4 0 0 3 2 1 0 0 0 0 0 1 1 0 0 20 1 2177.0787 P48637 P48637 368 387 GSS Glutathione synthetase yes yes 3 0.014832 61.52 By MS/MS By matching 7 3 1 2 1 3 1 3229100 3163700 65435 3317 908 3441 8109;8110;8111;8112 5805;5806 5805 639 2 362680 558240 EGGPNPEHNSNLANILEVCR RIFSKLCLNIRLAVKEGGPNPEHNSNLANI PEHNSNLANILEVCRSKHMPKSTIETALKM K E G C R S 1 1 4 0 1 0 3 2 1 1 2 0 0 0 2 1 0 0 0 1 0 0 20 0 2219.0389 Q9BSH4 Q9BSH4 94 113 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 3 8.3113E-13 169.06 By MS/MS 8 0 1 1 3543800 3543800 0 3318 2337 3442 8113 5807 5807 1 233780 0 EGGQIAVFDATNTTR CALAALRDVKSYLAKEGGQIAVFDATNTTR EGGQIAVFDATNTTRERRHMILHFAKENDF K E G T R E 2 1 1 1 0 1 1 2 0 1 0 0 0 1 0 0 3 0 0 1 0 0 15 0 1578.7638 Q16875 Q16875 117 131 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2 8.6144E-06 149.69 By MS/MS 6 0 1 1 140670 0 140670 3319 1553 3443 8114 5808 5808 1 0 431430 EGGSAGLIPSQFLEEK VNREDPNWWQASHVKEGGSAGLIPSQFLEE GGSAGLIPSQFLEEKRKAFVRRDWDNSGPF K E G E K R 1 0 0 0 0 1 3 3 0 1 2 1 0 1 1 2 0 0 0 0 0 0 16 0 1660.8308 Q9NZW5 Q9NZW5 267 282 MPP6 MAGUK p55 subfamily member 6 yes yes 2 0.0043538 107.34 By MS/MS 7 0.816 1 1 1 3 2084200 2084200 0 3320 2717 3444 8115;8116;8117 5809;5810 5810 2 24451 0 EGIDSECGPFIK LVHGNVCTKNLLLAREGIDSECGPFIKLSD LAREGIDSECGPFIKLSDPGIPITVLSRQE R E G I K L 0 0 0 1 1 0 2 2 0 2 0 1 0 1 1 1 0 0 0 0 0 0 12 0 1350.6126 P23458 P23458 725 736 JAK1 Tyrosine-protein kinase JAK1 yes yes 2 0.015159 91.265 By matching By MS/MS 4 0 2 1 1 377780 350740 27034 3321 669 3445 8118;8119 5811 5811 1 9574.9 56490 EGIHAQQK EIVPNSAEERLHSMKEGIHAQQKEPMIGVN ERLHSMKEGIHAQQKEPMIGVNQELAYFYP K E G Q K E 1 0 0 0 0 2 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 8 0 909.46683 CON__P02662 CON__P02662 125 132 yes yes 2 0.0056149 138.24 By MS/MS 5 1.41 1 1 1 1 1 5 1505100 1505100 0 + 3322 37 3446 8120;8121;8122;8123;8124 5812;5813 5812 2 39430 0 EGIPALDNFLDK PSQVVAETRKRKGLKEGIPALDNFLDKL__ GLKEGIPALDNFLDKL______________ K E G D K L 1 0 1 2 0 0 1 1 0 1 2 1 0 1 1 0 0 0 0 0 0 0 12 0 1330.6769 P13639 P13639 846 857 EEF2 Elongation factor 2 yes yes 2 0.0052688 104.82 By MS/MS 5 0.816 1 1 1 3 1250200 1250200 0 3323 576 3447 8125;8126;8127 5814 5814 1 33720 0 EGIPALDNFLDKL PSQVVAETRKRKGLKEGIPALDNFLDKL__ LKEGIPALDNFLDKL_______________ K E G K L - 1 0 1 2 0 0 1 1 0 1 3 1 0 1 1 0 0 0 0 0 0 0 13 1 1443.7609 P13639 P13639 846 858 EEF2 Elongation factor 2 yes yes 2 4.3905E-17 222.18 By MS/MS 6 0 1 1 1447200 1447200 0 3324 576 3448 8128 5815 5815 1 11286 0 EGIPLIILAGK GQTLDVFEAAELYQKEGIPLIILAGKKYGS LYQKEGIPLIILAGKKYGSGNSRDWAAKGP K E G G K K 1 0 0 0 0 0 1 2 0 3 2 1 0 0 1 0 0 0 0 0 0 0 11 0 1122.7012 P48200 P48200 837 847 IREB2 Iron-responsive element-binding protein 2 yes yes 2 0.0081645 100.02 By MS/MS 4 0 1 1 114150 114150 0 3325 902 3449 8129 5816 5816 1 3116.2 0 EGIREETVSLR DVYTGDALRICIVTKEGIREETVSLRKD__ IVTKEGIREETVSLRKD_____________ K E G L R K 0 2 0 0 0 0 3 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 1 1287.6783 P20618 P20618 229 239 PSMB1 Proteasome subunit beta type-1 yes yes 2 0.001812 153.1 By MS/MS 9.5 0.5 1 1 2 2525200 2525200 0 3326 643 3450 8130;8131 5817 5817 1 1483200 0 EGITGLYR MYSGTFDCFRKTLFREGITGLYRGMAAPII FRKTLFREGITGLYRGMAAPIIGVTPMFAV R E G Y R G 0 1 0 0 0 0 1 2 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 907.47633 O43772 O43772 66 73 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.030511 98.997 By MS/MS 8.5 0.5 1 1 2 9056300 9056300 0 3327 222 3451 8132;8133 5818 5818 1 935200 0 EGIVALRR NQKGIDPFSLDALSKEGIVALRRAKRRNME SLDALSKEGIVALRRAKRRNMERLTLACGG K E G R R A 1 2 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 1 912.5505 P40227 P40227 308 315 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.014784 148.07 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 177670000 177620000 54889 3328 828 3452 8134;8135;8136;8137;8138 5819 5819 1 1898900 168340 EGIVENLFK DIMPGLETAVVFQEKEGIVENLFKWAREAD VVFQEKEGIVENLFKWAREADQPLRTYSTG K E G F K W 0 0 1 0 0 0 2 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1047.5601 Q9Y4B6 Q9Y4B6 126 134 VPRBP Protein VPRBP yes yes 2 0.0022591 127.02 By MS/MS 3 0 1 1 365190 365190 0 3329 2950 3453 8139 5820 5820 1 9533.3 0 EGIVTATEQEVK EKYAKFFEDYGLFMREGIVTATEQEVKEDI FMREGIVTATEQEVKEDIAKLLRYESSALP R E G V K E 1 0 0 0 0 1 3 1 0 1 0 1 0 0 0 0 2 0 0 2 0 0 12 0 1302.6667 Q12931 Q12931 450 461 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 2.098E-11 210.08 By MS/MS 6 0.816 1 1 1 3 6866500 6866500 0 3330 1316 3454 8140;8141;8142 5821 5821 1 230560 0 EGIVTATEQEVKEDIAK EKYAKFFEDYGLFMREGIVTATEQEVKEDI IVTATEQEVKEDIAKLLRYESSALPSGQLT R E G A K L 2 0 0 1 0 1 4 1 0 2 0 2 0 0 0 0 2 0 0 2 0 0 17 1 1858.9524 Q12931 Q12931 450 466 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 3.5629E-24 223.03 By MS/MS 4.5 0.5 1 1 2 1214600 1214600 0 3331 1316 3455 8143;8144 5822 5822 1 48465 0 EGKPTIVEEDDPELFK YVEHTVKERKKQLKKEGKPTIVEEDDPELF GKPTIVEEDDPELFKQAVYKQTMKLFAELE K E G F K Q 0 0 0 2 0 0 4 1 0 1 1 2 0 1 2 0 1 0 0 1 0 0 16 1 1844.9044 O75937 O75937 144 159 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 3 0.017176 71.08 By MS/MS 8 0 1 1 795590 795590 0 3332 339 3456 8145 5823 5823 1 52485 0 EGLAELYEYK LAEIFKKIGSKENTKEGLAELYEYKKKYSD KENTKEGLAELYEYKKKYSDADIEPFLKNS K E G Y K K 1 0 0 0 0 0 3 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1213.5867 Q14008 Q14008 1848 1857 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.014721 96.034 By MS/MS 2 0 1 1 333330 333330 0 3333 1405 3457 8146 5824 5824 1 16568 0 EGLDEVAGIINDAK ELVSKIGDKNWKIRKEGLDEVAGIINDAKF KEGLDEVAGIINDAKFIQPNIGELPTALKG K E G A K F 2 0 1 2 0 0 2 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 14 0 1442.7253 Q14008 Q14008 879 892 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00014884 172.13 By MS/MS 2.5 0.5 1 1 2 2126500 2126500 0 3334 1405 3458 8147;8148 5825;5826 5825 2 81653 0 EGLEEGDQILR GIFVAGVLEDSPAAKEGLEEGDQILRVNNV PAAKEGLEEGDQILRVNNVDFTNIIREEAV K E G L R V 0 1 0 1 0 1 3 2 0 1 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1257.6201 Q07157 Q07157 459 469 TJP1 Tight junction protein ZO-1 yes yes 2 0.022323 87.258 By MS/MS 2 0 1 1 90936 90936 0 3335 1280 3459 8149 5827 5827 1 4520 0 EGLELPEDEEEKKK QLKEFDGKSLVSVTKEGLELPEDEEEKKKM KEGLELPEDEEEKKKMEESKAKFENLCKLM K E G K K M 0 0 0 1 0 0 6 1 0 0 2 3 0 0 1 0 0 0 0 0 0 0 14 2 1671.8203 P07900;Q58FG0;P08238;Q58FF7 P08238 539 552 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 4.3742E-17 221.32 By MS/MS 4.5 0.5 1 1 2 2478300 2478300 0 3336 501;494 3460 8150;8151 5828 5828 1 93005 0 EGLEYIPLR PWFFKHVENYLKTNREGLEYIPLRHYYHRH YLKTNREGLEYIPLRHYYHRHTRSIFWELQ R E G L R H 0 1 0 0 0 0 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 9 0 1088.5866 Q15392 Q15392 317 325 DHCR24 Delta(24)-sterol reductase yes yes 2 0.0059227 113.71 By MS/MS 1 0 1 1 1136000 1136000 0 3337 1497 3461 8152 5829 5829 1 55504 0 EGLGASEAVADIK MAGFPPLVAEDIMLKEGLGASEAVADIKFS LKEGLGASEAVADIKFSSAGWVSVTPNFKD K E G I K F 3 0 0 1 0 0 2 2 0 1 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1258.6405 Q8NC60 Q8NC60 612 624 NOA1 Nitric oxide-associated protein 1 yes yes 2 1.1555E-05 172.61 By MS/MS 5.5 0.5 1 1 2 6499700 6499700 0 3338 1951 3462 8153;8154 5830 5830 1 182300 0 EGLGSNYLGGR ETPLVADTSGAYFRREGLGSNYLGGRSPTE YFRREGLGSNYLGGRSPTEQEEPDPANLEV R E G G R S 0 1 1 0 0 0 1 4 0 0 2 0 0 0 0 1 0 0 1 0 0 0 11 0 1121.5465 Q96CU9 Q96CU9 353 363 FOXRED1 FAD-dependent oxidoreductase domain-containing protein 1 yes yes 2 0.0057884 104.42 By MS/MS 6.5 0.5 1 1 2 4560300 4560300 0 3339 2142 3463 8155;8156 5831 5831 1 39977 0 EGLLFEGR YLGELVRLILVKMAKEGLLFEGRITPELLT ILVKMAKEGLLFEGRITPELLTRGKFNTSD K E G G R I 0 1 0 0 0 0 2 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 919.47633 P19367 P19367 316 323 HK1 Hexokinase-1 yes yes 2 0.0037496 144.38 By MS/MS 4.75 1.48 1 1 1 1 4 3993600 3993600 0 3340 630 3464 8157;8158;8159;8160 5832;5833;5834 5832 3 111240 0 EGLLGLQNLLK EVLNRCASSNWSERKEGLLGLQNLLKNQRT SERKEGLLGLQNLLKNQRTLSRVELKRLCE K E G L K N 0 0 1 0 0 1 1 2 0 0 5 1 0 0 0 0 0 0 0 0 0 0 11 0 1196.7129 O75122;Q7Z460 O75122 672 682 CLASP2;CLASP1 CLIP-associating protein 2;CLIP-associating protein 1 no no 2 1.9334E-05 174.02 By MS/MS 3.5 0.5 1 1 2 234400 234400 0 3341 279;1790 3465 8161;8162 5835;5836;5837 5836 3 6229.5 0 EGLLGQR CRASSGGGGGGGGGREGLLGQRRPQDGQAR GGGGGGGREGLLGQRRPQDGQARSSCSPGG R E G Q R R 0 1 0 0 0 1 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 771.4239 Q6UB35 Q6UB35 44 50 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.020871 123.99 By MS/MS By matching 4.33 0.471 2 1 2 1 4097200 3874800 222340 3342 1726 3466 8163;8164;8165 5838 5838 1 110080 464600 EGLLLWCQR RFAIQDISVEETSAKEGLLLWCQRKTAPYK EETSAKEGLLLWCQRKTAPYKNVNVQNFHI K E G Q R K 0 1 0 0 1 1 1 1 0 0 3 0 0 0 0 0 0 1 0 0 0 0 9 0 1173.5965 P12814;Q08043;P35609;O43707 O43707 167 175 ACTN1;ACTN3;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-2;Alpha-actinin-4 no no 2 0.00012391 169.06 By MS/MS 4 0 1 1 1474800 1474800 0 3343 217;568 3467 8166 5839 5839 1 40261 0 EGLNLPSQLAHR SIEDICHVLSTVCKKEGLNLPSQLAHRLAE CKKEGLNLPSQLAHRLAEKSCRNLRKALLM K E G H R L 1 1 1 0 0 1 1 1 1 0 3 0 0 0 1 1 0 0 0 0 0 0 12 0 1333.7102 P40938 P40938 203 214 RFC3 Replication factor C subunit 3 yes yes 2 5.3993E-07 179.57 By MS/MS 7.5 0.5 1 1 2 2133400 2133400 0 3344 834 3468 8167;8168 5840 5840 1 46027 0 EGLPEDGTLYR YLPQEEKSPLFSVQREGLPEDGTLYRINRF SVQREGLPEDGTLYRINRFSSITAHPERWD R E G Y R I 0 1 0 1 0 0 2 2 0 0 2 0 0 0 1 0 1 0 1 0 0 0 11 0 1248.5986 Q8WUA4 Q8WUA4 363 373 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 2 0.00031295 150.35 By MS/MS 4 0 1 1 1353700 1353700 0 3345 2014 3469 8169 5841 5841 1 36955 0 EGLPVALDK ERLTQDAVAKANQTKEGLPVALDKHILGFD KANQTKEGLPVALDKHILGFDTGDAVLNEA K E G D K H 1 0 0 1 0 0 1 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 9 0 940.52295 Q9Y224 Q9Y224 177 185 C14orf166 UPF0568 protein C14orf166 yes yes 2 0.035796 90.709 By MS/MS 9 0.816 1 1 1 3 851290 851290 0 3346 2863 3470 8170;8171;8172 5842 5842 1 98582 0 EGLTCPVGIALTPK ILHFPKGGGYSVLIREGLTCPVGIALTPKG REGLTCPVGIALTPKGQLLVLDCWDHCIKI R E G P K G 1 0 0 0 1 0 1 2 0 1 2 1 0 0 2 0 2 0 0 1 0 0 14 0 1454.7803 Q13049 Q13049 614 627 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 2 0.00063121 130.44 By MS/MS 5 0 1 1 599640 599640 0 3347 1329 3471 8173 5843 5843 1 24648 0 EGLVVRPQR AALDSRKNYNWAITREGLVVRPQRRDS___ NWAITREGLVVRPQRRDS____________ R E G Q R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 9 1 1052.6091 Q9BYN8 Q9BYN8 194 202 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.012754 143.11 By MS/MS By matching 9 0 2 1 1 3857100 3836300 20802 3348 2417 3472 8174;8175 5844 5844 1 2201700 224180 EGMFNNANVLFK RTHFTHSQFIVVSLKEGMFNNANVLFKTKF SLKEGMFNNANVLFKTKFVDGVSTVARFTQ K E G F K T 1 0 3 0 0 0 1 1 0 0 1 1 1 2 0 0 0 0 0 1 0 0 12 0 1382.6653 O95347 O95347 1147 1158 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00024588 145.17 By MS/MS 3 0 1 1 759620 759620 0 3349 385 3473 8176 5845 5845 203 1 19830 0 EGMNIVEAMER TEWLDGKHVVFGKVKEGMNIVEAMERFGSR GKVKEGMNIVEAMERFGSRNGKTSKKITIA K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 11 0 1277.5744 P62937 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 5.0175E-11 208.84 By MS/MS 10 0 2 2 1114100 1114100 0 3350 1163 3474;3475 8177;8178 5846;5847 5846 905;906 2 1184200 0 EGNDLYHEMIESGVINLK HGGYSVFAGVGERTREGNDLYHEMIESGVI DLYHEMIESGVINLKDATSKVALVYGQMNE R E G L K D 0 0 2 1 0 0 3 2 1 2 2 1 1 0 0 1 0 0 1 1 0 0 18 0 2059.9885 P06576 P06576 242 259 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 4.5412E-83 316.42 By MS/MS 6.33 0.471 2 1 3 17169000 17169000 0 3351 478 3476 8179;8180;8181 5848;5849 5849 2 134470 0 EGNDLYHEMIESGVINLKDATSK HGGYSVFAGVGERTREGNDLYHEMIESGVI MIESGVINLKDATSKVALVYGQMNEPPGAR R E G S K V 1 0 2 2 0 0 3 2 1 2 2 2 1 0 0 2 1 0 1 1 0 0 23 1 2562.2272 P06576 P06576 242 264 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3;4 3.3638E-17 176.44 By MS/MS 6 0 2 2 6321900 6321900 0 3352 478 3477 8182;8183 5850;5851 5851 2 49299 0 EGNFDIVSGTR SHHPKFIPEFIRKQKEGNFDIVSGTRYKGN RKQKEGNFDIVSGTRYKGNGGVYGWDLKRK K E G T R Y 0 1 1 1 0 0 1 2 0 1 0 0 0 1 0 1 1 0 0 1 0 0 11 0 1193.5677 O60762 O60762 137 147 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 4.0044E-29 253.71 By MS/MS By matching 8.75 0.829 2 1 1 3 1 73909000 73607000 301540 3353 263 3478 8184;8185;8186;8187 5852 5852 1 5947200 2572500 EGNQEVPFDVPELWYEDEK IPREKTLRLLAEILREGNQEVPFDVPELWY EVPFDVPELWYEDEKHSLNSSSASTTEPDF R E G E K H 0 0 1 2 0 1 5 1 0 0 1 1 0 1 2 0 0 1 1 2 0 0 19 0 2322.0328 P42704 P42704 1002 1020 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.049821 60.364 By MS/MS 3.5 0.5 1 1 2 587790 587790 0 3354 854 3479 8188;8189 5853 5853 1 15440 0 EGNQIPGFPDR SRFFDKVIEKRYFLREGNQIPGFPDRKRFG YFLREGNQIPGFPDRKRFGAGTLKSLHYD_ R E G D R K 0 1 1 1 0 1 1 2 0 1 0 0 0 1 2 0 0 0 0 0 0 0 11 0 1228.5836 Q5HYI8 Q5HYI8 212 222 RABL3 Rab-like protein 3 yes yes 2 0.029111 82.261 By MS/MS 8.5 0.5 1 1 2 2920800 2920800 0 3355 1601 3480 8190;8191 5854 5854 1 313770 0 EGNVLGHSR SRSLESIKGIAVMDKEGNVLGHSRIAGTKA IAVMDKEGNVLGHSRIAGTKAVRETLASRI K E G S R I 0 1 1 0 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 967.48354 Q6P4A7 Q6P4A7 231 239 SFXN4 Sideroflexin-4 yes yes 2 0.00047068 154.01 By MS/MS 7.5 0.5 1 1 2 867690 867690 0 3356 1709 3481 8192;8193 5855 5855 1 53176 0 EGNVPNIIIAGPPGTGK VGNEDTVSRLEVFAREGNVPNIIIAGPPGT NVPNIIIAGPPGTGKTTSILCLARALLGPA R E G G K T 1 0 2 0 0 0 1 4 0 3 0 1 0 0 3 0 1 0 0 1 0 0 17 0 1632.8835 P35250 P35250 66 82 RFC2 Replication factor C subunit 2 yes yes 2 8.1457E-07 171.36 By MS/MS 7.5 0.5 1 1 2 11243000 11243000 0 3357 786 3482 8194;8195 5856;5857 5856 2 335430 0 EGPALLLLSR PGRSPAAAIEEPWGREGPALLLLSRFSQAP EPWGREGPALLLLSRFSQAPDPSGALVTGP R E G S R F 1 1 0 0 0 0 1 1 0 0 4 0 0 0 1 1 0 0 0 0 0 0 10 0 1067.6339 Q96C12 Q96C12 522 531 ARMC5 Armadillo repeat-containing protein 5 yes yes 2 0.00076202 153.05 By MS/MS 4 0 1 1 359210 359210 0 3358 2135 3483 8196 5858 5858 1 9806 0 EGPAVVGQFIQDVK SIAKCVAALTRACPKEGPAVVGQFIQDVKN KEGPAVVGQFIQDVKNSRSTDSIRLLALLS K E G V K N 1 0 0 1 0 2 1 2 0 1 0 1 0 1 1 0 0 0 0 3 0 0 14 0 1485.7827 Q86VP6 Q86VP6 813 826 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 5.1677E-18 221.55 By MS/MS 4 0.816 1 1 1 3 10261000 10261000 0 3359 1829 3484 8197;8198;8199 5859;5860;5861;5862 5859 4 284240 0 EGPEPPEEVPPPTTPPVPK GSFEASPVEPQLPSKEGPEPPEEVPPPTTP PPEEVPPPTTPPVPKVEPKGDGIGPTRQPP K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2 0.024886 64.224 By MS/MS 2 0 1 1 219250 219250 0 3360 907 3485 8200 5863 5863 1 10898 0 EGPITEDFFK FQLTSDEMSLLRGTREGPITEDFFKALGRV LRGTREGPITEDFFKALGRVKQIHNDVKVL R E G F K A 0 0 0 1 0 0 2 1 0 1 0 1 0 2 1 0 1 0 0 0 0 0 10 0 1181.5605 Q9Y2V7 Q9Y2V7 175 184 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.019313 92.838 By MS/MS 5 0 1 1 1928900 1928900 0 3361 2903 3486 8201 5864 5864 1 79285 0 EGPLCDELIR SVKDSIVQGFQWGTREGPLCDELIRNVKFK QWGTREGPLCDELIRNVKFKILDAVVAQEP R E G I R N 0 1 0 1 1 0 2 1 0 1 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1200.5809 Q15029 Q15029 776 785 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.001383 156.35 By MS/MS 3 0.816 1 1 1 3 440180 440180 0 3362 1466 3487 8202;8203;8204 5865;5866 5866 2 12530 0 EGPPFISEAAVR ______________________________ AKREGPPFISEAAVRGNAAVLDYCRTSVSA R E G V R G 2 1 0 0 0 0 2 1 0 1 0 0 0 1 2 1 0 0 0 1 0 0 12 0 1271.651 Q9BV81 Q9BV81 9 20 EMC6 ER membrane protein complex subunit 6 yes yes 2 0.00034023 167.93 By MS/MS 10 0 1 1 1739700 1739700 0 3363 2373 3488 8205 5867 5867 1 1849100 0 EGPSGSGDSQLSASSR PPVPQGEAEEDSQGKEGPSGSGDSQLSASS GPSGSGDSQLSASSRSESGRMKKSDNKMGI K E G S R S 1 1 0 1 0 1 1 3 0 0 1 0 0 0 1 6 0 0 0 0 0 0 16 0 1520.6703 Q12789 Q12789 743 758 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00031169 128.68 By MS/MS 2.5 0.5 1 1 2 410730 410730 0 3364 1306 3489 8206;8207 5868 5868 1 17295 0 EGPYSISVLYGDEEVPR DNADGTQTVNYVPSREGPYSISVLYGDEEV PYSISVLYGDEEVPRSPFKVKVLPTHDASK R E G P R S 0 1 0 1 0 0 3 2 0 1 1 0 0 0 2 2 0 0 2 2 0 0 17 0 1908.9105 P21333 P21333 1516 1532 FLNA Filamin-A yes yes 2 8.1549E-07 148.96 By MS/MS 2.5 0.5 1 1 2 680150 680150 0 3365 648 3490 8208;8209 5869 5869 1 24868 0 EGQIEPSFVFR YNPDKHYIYVVRILREGQIEPSFVFRTFDE RILREGQIEPSFVFRTFDEFQELHNKLSII R E G F R T 0 1 0 0 0 1 2 1 0 1 0 0 0 2 1 1 0 0 0 1 0 0 11 0 1307.651 O00443 O00443 1451 1461 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 2 0.025028 94.409 By MS/MS 3 0 1 1 292820 292820 0 3366 96 3491 8210 5870 5870 1 7644.2 0 EGQNYQQNCIK IINIMQDRLKACQQREGQNYQQNCIKEVEQ CQQREGQNYQQNCIKEVEQFTQVAKAYQDR R E G I K E 0 0 2 0 1 3 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 11 0 1380.6092 O96000 O96000 111 121 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 6.2985E-31 270.57 By MS/MS 9 0 1 1 3585700 3585700 0 3367 417 3492 8211 5871 5871 1 2057900 0 EGQNYQQNCIKEVEQFTQVAK IINIMQDRLKACQQREGQNYQQNCIKEVEQ QNCIKEVEQFTQVAKAYQDRYQDLGAYSSA R E G A K A 1 0 2 0 1 5 3 1 0 1 0 2 0 1 0 0 1 0 1 2 0 0 21 1 2540.1966 O96000 O96000 111 131 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 3 0.0025651 78.794 By MS/MS 9 0 1 1 434900 434900 0 3368 417 3493 8212 5872 5872 1 249590 0 EGQTICVR WFPILFPIKQPITVREGQTICVRFWRCSNS KQPITVREGQTICVRFWRCSNSKKVWYEWA R E G V R F 0 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 8 0 961.46511 O14744 O14744 594 601 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.051888 90.37 By MS/MS By matching 5 0 2 1 1 5542000 5333700 208280 3369 125 3494 8213;8214 5873 5873 1 219240 616290 EGQWDCSVCLVR SKAPKSGFEGMFTKKEGQWDCSVCLVRNEA TKKEGQWDCSVCLVRNEASATKCIACQNPG K E G V R N 0 1 0 1 2 1 1 1 0 0 1 0 0 0 0 1 0 1 0 2 0 0 12 0 1507.6548 P49792 P49792 1607 1618 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 2 0.020467 85.355 By MS/MS 1 0 1 1 131300 131300 0 3370 933 3495 8215 5874 5874 1 6415 0 EGSALSHVR VVITPPYQVENCKGKEGSALSHVRKIVEKH ENCKGKEGSALSHVRKIVEKHFRDVESQKI K E G V R K 1 1 0 0 0 0 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 954.48829 Q3MHD2 Q3MHD2 155 163 LSM12 Protein LSM12 homolog yes yes 2 0.0021347 128.36 By MS/MS 9 0 1 1 416230 416230 0 3371 1568 3496 8216 5875 5875 1 238880 0 EGSGLFPDLLVR DPERAIQDAILEVLKEGSGLFPDLLVRETE VLKEGSGLFPDLLVRETEAVIHKHRSATYC K E G V R E 0 1 0 1 0 0 1 2 0 0 3 0 0 1 1 1 0 0 0 1 0 0 12 0 1301.698 Q86Y56 Q86Y56 815 826 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.00080442 135.55 By MS/MS 4.5 0.5 1 1 2 1355100 1355100 0 3372 1844 3497 8217;8218 5876;5877 5876 2 47937 0 EGSIEIDIPVPK AKLIILENTIYLFSKEGSIEIDIPVPKYLS FSKEGSIEIDIPVPKYLSSVSSQETQGGPL K E G P K Y 0 0 0 1 0 0 2 1 0 3 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1295.6973 Q96RQ3 Q96RQ3 624 635 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 7.4417E-05 195.79 By MS/MS 5 0 1 1 1407100 1407100 0 3373 2249 3498 8219 5878 5878 1 57837 0 EGSLKDQLALAIGK LNSSELSGLPAGPDREGSLKDQLALAIGKL REGSLKDQLALAIGKLGENMILKRAAWVKV R E G G K L 2 0 0 1 0 1 1 2 0 1 3 2 0 0 0 1 0 0 0 0 0 0 14 1 1441.814 P43897 P43897 179 192 TSFM Elongation factor Ts, mitochondrial yes yes 2;3 7.6601E-25 241.39 By MS/MS 8 0 2 2 4387200 4387200 0 3374 868 3499 8220;8221 5879;5880 5879 2 289420 0 EGSPVLLNCLMYK ENDYYTPTGEFRVDREGSPVLLNCLMYKMC DREGSPVLLNCLMYKMCYYRFGQVYTEAKR R E G Y K M 0 0 1 0 1 0 1 1 0 0 3 1 1 0 1 1 0 0 1 1 0 0 13 0 1522.7524 P46977 P46977 629 641 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 1.8974E-05 166.66 By MS/MS 1.5 0.5 1 1 2 1083600 1083600 0 3375 893 3500 8222;8223 5881;5882 5881 632 2 53215 0 EGSTAQLIINTEK TVHSGSLMLVTVELKEGSTAQLIINTEKTV LKEGSTAQLIINTEKTVIGSVLLRELKPVL K E G E K T 1 0 1 0 0 1 2 1 0 2 1 1 0 0 0 1 2 0 0 0 0 0 13 0 1402.7304 O00203 O00203 1064 1076 AP3B1 AP-3 complex subunit beta-1 yes yes 2 2.1786E-05 168.85 By MS/MS 4 0 1 1 909050 909050 0 3376 77 3501 8224 5883 5883 1 24816 0 EGSTQQLQTTSPK EAVLNNRFIKVYWHREGSTQQLQTTSPKVM HREGSTQQLQTTSPKVMQPLVQQPILPVVK R E G P K V 0 0 0 0 0 3 1 1 0 0 1 1 0 0 1 2 3 0 0 0 0 0 13 0 1403.6892 Q5T8P6 Q5T8P6 606 618 RBM26 RNA-binding protein 26 yes yes 2 0.00012598 153.54 By MS/MS 3.5 0.5 1 1 2 545990 545990 0 3377 1633 3502 8225;8226 5884 5884 1 14400 0 EGTALVPYGLPCIR YVNPRGVRFTQSSQKEGTALVPYGLPCIRE KEGTALVPYGLPCIRELFRFLISLTNPHDR K E G I R E 1 1 0 0 1 0 1 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 14 0 1544.8021 Q92538 Q92538 392 405 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.016905 83.862 By MS/MS 2.5 0.5 1 1 2 465770 465770 0 3378 2055 3503 8227;8228 5885 5885 1 18487 0 EGTDSSQGIPQLVSNISACQVIAEAVR ______________________________ VSNISACQVIAEAVRTTLGPRGMDKLIVDG K E G V R T 3 1 1 1 1 3 2 2 0 3 1 0 0 0 1 4 1 0 0 3 0 0 27 0 2828.3974 Q99832 Q99832 11 37 CCT7 T-complex protein 1 subunit eta yes yes 2;3 5.7347E-09 111.55 By MS/MS 6 0 2 2 50190000 50190000 0 3379 2295 3504 8229;8230 5886;5887;5888;5889 5887 4 391380 0 EGTGSTATSSSSTAGAAGK ______________________________ STATSSSSTAGAAGKGKGKGGSGDSAVKQV K E G G K G 4 0 0 0 0 0 1 4 0 0 0 1 0 0 0 5 4 0 0 0 0 0 19 0 1626.7333 O15372 O15372 6 24 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 4.9121E-20 212.1 By MS/MS By MS/MS 5.64 2.77 1 1 1 1 1 1 2 1 1 1 10 1 49353000 49030000 323900 3380 173 3505 8231;8232;8233;8234;8235;8236;8237;8238;8239;8240;8241 5890;5891;5892;5893;5894;5895;5896 5894 7 1545800 1329700 EGTQEEAASTLLLAEAQQGK LLPPGAPFIELLPVKEGTQEEAASTLLLAE EAASTLLLAEAQQGKEYELVLTDRASLTRC K E G G K E 4 0 0 0 0 3 4 2 0 0 3 1 0 0 0 1 2 0 0 0 0 0 20 0 2073.0226 Q8N2G8 Q8N2G8 328 347 GHDC GH3 domain-containing protein yes yes 2 1.7552E-31 226.39 By MS/MS 6 0 1 1 2832100 2832100 0 3381 1905 3506 8242 5897 5897 1 22085 0 EGVECEVINMR RPVGHCLEAAAVLSKEGVECEVINMRTIRP VLSKEGVECEVINMRTIRPMDMETIEASVM K E G M R T 0 1 1 0 1 0 3 1 0 1 0 0 1 0 0 0 0 0 0 2 0 0 11 0 1334.5959 P11177 P11177 259 269 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 3.7879E-16 218.58 By MS/MS 8.5 1.12 2 2 2 2 8 47145000 47145000 0 3382 549 3507;3508 8243;8244;8245;8246;8247;8248;8249;8250 5898;5899;5900 5898 342 3 2357800 0 EGVEEAAKTAK SLHEVSKSDLGRKIKEGVEEAAKTAKQSAE RKIKEGVEEAAKTAKQSAESVSKGGEKLGR K E G A K Q 3 0 0 0 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 11 1 1131.5772 O43615 O43615 147 157 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.018806 118.03 By MS/MS 7 0 1 1 629270 629270 0 3383 209 3509 8251 5901 5901 1 11245 0 EGVHGGLINK TVTKTDKTLVLLMGKEGVHGGLINKKCYEM LLMGKEGVHGGLINKKCYEMASHLRRSQY_ K E G N K K 0 0 1 0 0 0 1 3 1 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1022.5509 P07737 P07737 117 126 PFN1 Profilin-1 yes yes 2 0.0051361 107.01 By MS/MS 10 0 1 1 460860 460860 0 3384 491 3510 8252 5902 5902 1 489840 0 EGVKFDESEKTK ALPEFDGKRFQNVAKEGVKFDESEKTKESR VAKEGVKFDESEKTKESREAVEKEFEPLLN K E G T K E 0 0 0 1 0 0 3 1 0 0 0 3 0 1 0 1 1 0 0 1 0 0 12 2 1395.6882 P14625 P14625 594 605 HSP90B1 Endoplasmin yes yes 2;3 0.0011008 140.63 By MS/MS 4.33 0.471 2 1 3 5472500 5472500 0 3385 589 3511 8253;8254;8255 5903;5904 5903 2 155940 0 EGVLTGSPEQK CLPKKGVTSILPVLREGVLTGSPEQKEEAA PVLREGVLTGSPEQKEEAAKALGLVIRLTS R E G Q K E 0 0 0 0 0 1 2 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1143.5772 Q92616 Q92616 2270 2280 GCN1L1 Translational activator GCN1 yes yes 2 6.3749E-07 206.43 By MS/MS 1.5 0.5 1 1 2 1273300 1273300 0 3386 2068 3512 8256;8257 5905 5905 1 63252 0 EGVLTGSPEQKEEAAK CLPKKGVTSILPVLREGVLTGSPEQKEEAA GVLTGSPEQKEEAAKALGLVIRLTSADALR R E G A K A 2 0 0 0 0 1 4 2 0 0 1 2 0 0 1 1 1 0 0 1 0 0 16 1 1671.8315 Q92616 Q92616 2270 2285 GCN1L1 Translational activator GCN1 yes yes 2 1.1356E-09 190.35 By MS/MS 2.5 1.12 1 1 1 1 4 722870 722870 0 3387 2068 3513 8258;8259;8260;8261 5906 5906 1 30744 0 EGVREVFETATR RIQAYDYLECSAKTKEGVREVFETATRAAL KTKEGVREVFETATRAALQKRYGSQNGCIN K E G T R A 1 2 0 0 0 0 3 1 0 0 0 0 0 1 0 0 2 0 0 2 0 0 12 1 1392.6997 P62745 P62745 165 176 RHOB Rho-related GTP-binding protein RhoB yes yes 3 0.014561 66.498 By MS/MS 9 0 1 1 239080 239080 0 3388 1141 3514 8262 5907 5907 1 137210 0 EGVSAAFAVK NASILNSLYNENLVKEGVSAAFAVKLFKSW ENLVKEGVSAAFAVKLFKSWINEKDINAVA K E G V K L 3 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 10 0 977.5182 Q7L1Q6 Q7L1Q6 179 188 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.00071077 136.27 By MS/MS 7 0 1 1 7184800 7184800 0 3389 1762 3515 8263 5908 5908 1 128390 0 EGVVECSFVK GARFVFSLVDAMNGKEGVVECSFVKSQETE AMNGKEGVVECSFVKSQETECTYFSTPLLL K E G V K S 0 0 0 0 1 0 2 1 0 0 0 1 0 1 0 1 0 0 0 3 0 0 10 0 1152.5485 P40926 P40926 270 279 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 1.291E-10 204.42 By MS/MS 8 0.816 1 1 1 3 3682500 3682500 0 3390 832 3516 8264;8265;8266 5909 5909 1 258840 0 EGWEYVK SALSVAPSKAREYSKEGWEYVKARTK____ SKAREYSKEGWEYVKARTK___________ K E G V K A 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 7 0 909.42323 Q5XKP0 Q5XKP0 108 114 QIL1 Protein QIL1 yes yes 2 0.052052 100.74 By MS/MS 10 0 1 1 1630000 1630000 0 3391 1664 3517 8267 5910 5910 1 1732600 0 EGWGLQGLNK EQPSTVGYARQIIKKEGWGLQGLNKGLTAT QIIKKEGWGLQGLNKGLTATLGRHGVFNMV K E G N K G 0 0 1 0 0 1 1 3 0 0 2 1 0 0 0 0 0 1 0 0 0 0 10 0 1100.5615 Q9BQT8 Q9BQT8 161 170 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 1.0278E-15 221.7 By MS/MS 8 0 1 1 1821400 1821400 0 3392 2319 3518 8268 5911 5911 1 120160 0 EHALLAYTLGVK VGEFEAGISKNGQTREHALLAYTLGVKQLI QTREHALLAYTLGVKQLIVGVNKMDSTEPP R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 0 12 0 1313.7343 Q5VTE0;P68104;Q05639 Q5VTE0 135 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 7.5075E-05 160.53 By MS/MS 6.07 2.69 2 1 1 1 2 3 2 2 1 15 35107000 35107000 0 3393 1184 3519 8269;8270;8271;8272;8273;8274;8275;8276;8277;8278;8279;8280;8281;8282;8283 5912;5913;5914;5915;5916;5917;5918;5919;5920 5919 9 777510 0 EHAPSIIFMDEIDSIGSSR GEGARMVRELFVMAREHAPSIIFMDEIDSI SIIFMDEIDSIGSSRLEGGSGGDSEVQRTM R E H S R L 1 1 0 2 0 0 2 1 1 4 0 0 1 1 1 4 0 0 0 0 0 0 19 0 2102.9943 P62195 P62195 240 258 PSMC5 26S protease regulatory subunit 8 yes yes 3 0.0012321 102.5 By MS/MS 7 0 1 1 478240 478240 0 3394 1117 3520 8284 5921 5921 868 1 8546.3 0 EHCPAGQPVK TRRALDIPLVKNWYREHCPAGQPVKVRVSY KNWYREHCPAGQPVKVRVSYQKLLKYYVLN R E H V K V 1 0 0 0 1 1 1 1 1 0 0 1 0 0 2 0 0 0 0 1 0 0 10 0 1121.5288 Q6P2Q9 Q6P2Q9 433 442 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2;3 0.00044336 147.19 By MS/MS 2.29 1.03 2 2 2 1 7 1602600 1602600 0 3395 1706 3521 8285;8286;8287;8288;8289;8290;8291 5922;5923 5922 2 74485 0 EHDPVGQMVNNPK GYQTAFSQLAFAGKKEHDPVGQMVNNPKIH KKEHDPVGQMVNNPKIHLAQSLHKLSTACP K E H P K I 0 0 2 1 0 1 1 1 1 0 0 1 1 0 2 0 0 0 0 2 0 0 13 0 1463.6827 P55060 P55060 913 925 CSE1L Exportin-2 yes yes 3 0.00072942 129.74 By MS/MS 4 0 2 2 1295700 1295700 0 3396 1025 3522;3523 8292;8293 5924;5925 5924 796 2 35370 0 EHDQLIEK NFIQNLSLFLCTFLKEHDQLIEKRLNLRET FLCTFLKEHDQLIEKRLNLRETLMEALHYM K E H E K R 0 0 0 1 0 1 2 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 1010.5033 O14980 O14980 332 339 XPO1 Exportin-1 yes yes 2 0.047207 92.439 By MS/MS 4 0 1 1 505690 505690 0 3397 142 3524 8294 5926 5926 1 13805 0 EHFAQFGHVR FVRRIPWTAASSQLKEHFAQFGHVRRCILP SSQLKEHFAQFGHVRRCILPFDKETGFHRG K E H V R R 1 1 0 0 0 1 1 1 2 0 0 0 0 2 0 0 0 0 0 1 0 0 10 0 1226.5945 Q9GZT3 Q9GZT3 37 46 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 3;4 0.0022722 99.013 By MS/MS 9.67 0.471 1 2 3 6033300 6033300 0 3398 2443 3525 8295;8296;8297 5927;5928 5927 2 6388900 0 EHGAFDAVK TDTESELDLISRLSREHGAFDAVKCTHWAE ISRLSREHGAFDAVKCTHWAEGGKGALALA R E H V K C 2 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 9 0 972.46649 P11586 P11586 776 784 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0029682 120.15 By MS/MS 4.5 0.5 1 1 2 3499200 3499200 0 3399 556 3526 8298;8299 5929 5929 1 98252 0 EHIDKYKN IYEGTSQIQRLIVAREHIDKYKN_______ QRLIVAREHIDKYKN_______________ R E H K N - 0 0 1 1 0 0 1 0 1 1 0 2 0 0 0 0 0 0 1 0 0 0 8 2 1045.5193 P11310 P11310 414 421 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.036348 139.68 By MS/MS 7.5 0.5 1 1 2 1458200 1458200 0 3400 552 3527 8300;8301 5930 5930 1 28194 0 EHIKNPDWR CCEDDIVPHVLPFIKEHIKNPDWRYRDAAV VLPFIKEHIKNPDWRYRDAAVMAFGCILEG K E H W R Y 0 1 1 1 0 0 1 0 1 1 0 1 0 0 1 0 0 1 0 0 0 0 9 1 1193.5942 Q14974 Q14974 373 381 KPNB1 Importin subunit beta-1 yes yes 3 0.032246 83.647 By MS/MS 5 0.816 1 1 1 3 1750200 1750200 0 3401 1452 3528 8302;8303;8304 5931 5931 1 47516 0 EHINSVSAMK CRLIRGWDDLFNKVKEHINSVSAMKLSPYY FNKVKEHINSVSAMKLSPYYKVFEEDALSW K E H M K L 1 0 1 0 0 0 1 0 1 1 0 1 1 0 0 2 0 0 0 1 0 0 10 0 1114.5441 Q14204 Q14204 1499 1508 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.01696 89.029 By MS/MS 1 0 1 1 116440 116440 0 3402 1421 3529 8305 5932 5932 1101 1 5689 0 EHLLLAR ILVVAANDGPMPQTREHLLLARQIGVEHVV DGPMPQTREHLLLARQIGVEHVVVYVNKAD R E H A R Q 1 1 0 0 0 0 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 850.50249 P49411 P49411 163 169 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.01575 138.07 By MS/MS 8 1.41 1 1 1 1 1 5 142600000 142600000 0 3403 918 3530 8306;8307;8308;8309;8310 5933;5934;5935;5936 5933 4 3788300 0 EHQHEEIQNVR LQGGMAFLDKRLQVKEHQHEEIQNVRNHIH LQVKEHQHEEIQNVRNHIHSCFSDVTCFLL K E H V R N 0 1 1 0 0 2 3 0 2 1 0 0 0 0 0 0 0 0 0 1 0 0 11 0 1417.6698 Q6DD88 Q6DD88 240 250 ATL3 Atlastin-3 yes yes 3 0.048542 54.471 By MS/MS 6.5 0.5 1 1 2 3007400 3007400 0 3404 1677 3531 8311;8312 5937 5937 1 29872 0 EHSNPNYDK SAVSQQVQCIQEALREHSNPNYDKTSAPIT IQEALREHSNPNYDKTSAPITCELLNKQVK R E H D K T 0 0 2 1 0 0 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 0 1102.468 Q14204 Q14204 1984 1992 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00086498 145.16 By MS/MS 1.5 0.5 1 1 2 191400 191400 0 3405 1421 3532 8313;8314 5938 5938 1 9393.9 0 EHTAYYIK EVESMGAHLNAYSTREHTAYYIKALSKDLP LNAYSTREHTAYYIKALSKDLPKAVELLGD R E H I K A 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 2 0 0 0 8 0 1023.5025 P31930 P31930 127 134 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2;3 0.0089639 111.04 By MS/MS 6.5 0.5 2 2 4 4415700 4415700 0 3406 756 3533 8315;8316;8317;8318 5939;5940 5940 2 59799 0 EHTSYKQQLEAVNEAIK QEVEAITLELEELKREHTSYKQQLEAVNEA TSYKQQLEAVNEAIKSYESQIEVMAAEVAK R E H I K S 2 0 1 0 0 2 3 0 1 1 1 2 0 0 0 1 1 0 1 1 0 0 17 1 1987.0011 O95347 O95347 832 848 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.0098387 79.326 By MS/MS 3 0 1 1 1507600 1507600 0 3407 385 3534 8319 5941 5941 1 39357 0 EHVVAASK VGERQPLLGPPESMREHVVAASKAMKMGDW GPPESMREHVVAASKAMKMGDWKTCHSFII R E H S K A 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 8 0 839.45012 Q99613;B5ME19 Q99613 735 742 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.00024648 190.26 By MS/MS By matching 5.67 1.49 2 1 1 1 1 5 1 3520800 3504200 16651 3408 2275 3535 8320;8321;8322;8323;8324;8325 5942 5942 1 107830 34793 EHVYDLFEK WLHDEISMAQDGLDREHVYDLFEKAVKDYI QDGLDREHVYDLFEKAVKDYICPNIWLEYG R E H E K A 0 0 0 1 0 0 2 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 9 0 1178.5608 Q15020 Q15020 167 175 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 2 0.0019304 130.56 By MS/MS 3 0 1 1 411000 411000 0 3409 1463 3536 8326 5943 5943 1 10729 0 EHYLEDILAK GCPVIKVPGFMYPVKEHYLEDILAKLGKHQ MYPVKEHYLEDILAKLGKHQYLHRHRHHES K E H A K L 1 0 0 1 0 0 2 0 1 1 2 1 0 0 0 0 0 0 1 0 0 0 10 0 1229.6292 Q7L2E3 Q7L2E3 620 629 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0001535 159.58 By MS/MS 3.5 0.5 1 1 2 4313200 4313200 0 3410 1763 3537 8327;8328 5944;5945 5944 2 113870 0 EIAAFFPDFSEQR RNTTHGSDSVVSASREIAAFFPDFSEQRWY SREIAAFFPDFSEQRWYEEEEPQLRCGPVC R E I Q R W 2 1 0 1 0 1 2 0 0 1 0 0 0 3 1 1 0 0 0 0 0 0 13 0 1555.7307 O75414 O75414 140 152 NME6 Nucleoside diphosphate kinase 6 yes yes 2 0.0048625 117.52 By MS/MS 9 0 1 1 350530 350530 0 3411 306 3538 8329 5946 5946 1 201170 0 EIAAVFQDNR SPPQEEIGLIRLLRREIAAVFQDNRMIAVC RLLRREIAAVFQDNRMIAVCQNVALSAEDK R E I N R M 2 1 1 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1161.5778 Q7Z7H8 Q7Z7H8 85 94 MRPL10 39S ribosomal protein L10, mitochondrial yes yes 2 8.1608E-22 246.93 By MS/MS By matching 8.75 0.829 2 1 1 3 1 16780000 16714000 65904 3412 1809 3539 8330;8331;8332;8333 5947;5948 5948 2 2608000 562240 EIADGLCLEVEGK LISHDEMFSDIYKIREIADGLCLEVEGKMV IREIADGLCLEVEGKMVSRTEGNIDDSLIG R E I G K M 1 0 0 1 1 0 3 2 0 1 2 1 0 0 0 0 0 0 0 1 0 0 13 0 1431.6915 P13693 P13693 22 34 TPT1 Translationally-controlled tumor protein yes yes 2 9.4849E-35 259.35 By MS/MS 9 0 1 1 286550 286550 0 3413 579 3540 8334 5949 5949 1 164450 0 EIAEAYLGK FYPEEVSSMVLTKMKEIAEAYLGKTVTNAV VLTKMKEIAEAYLGKTVTNAVVTVPAYFND K E I G K T 2 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 992.51786 P11142 P11142 129 137 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.0066554 118.74 By MS/MS 4 0.816 1 1 1 3 6982000 6982000 0 3414 546 3541 8335;8336;8337 5950 5950 1 272320 0 EIAEPLFDLK LQLWAFKLDYDSMEREIAEPLFDLKVGMEQ DSMEREIAEPLFDLKVGMEQLVQNATFRCI R E I L K V 1 0 0 1 0 0 2 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 10 0 1173.6281 Q9Y613 Q9Y613 796 805 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0010404 120.99 By MS/MS 3 0 1 1 1208000 1208000 0 3415 2993 3542 8338 5951 5951 1 31536 0 EIAPGLTGSEWTR SLGGPLSSHPSRYHREIAPGLTGSEWTRTV HREIAPGLTGSEWTRTVLSLNSRSEAESMP R E I T R T 1 1 0 0 0 0 2 2 0 1 1 0 0 0 1 1 2 1 0 0 0 0 13 0 1415.7045 Q9C0C7 Q9C0C7 409 421 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes yes 2 0.011317 93.561 By MS/MS 3.5 0.5 1 1 2 757370 757370 0 3416 2434 3543 8339;8340 5952 5952 1 19864 0 EIAQDFKTDLR TELLIRKLPFQRLVREIAQDFKTDLRFQSS RLVREIAQDFKTDLRFQSSAVMALQEASEA R E I L R F 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1334.683 Q71DI3;Q16695;P84243;P68431 Q71DI3 74 84 HIST2H3A;HIST3H3;H3F3A;HIST1H3A Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.020386 117.14 By MS/MS 10 0 1 1 510660 510660 0 3417 1189 3544 8341 5953 5953 1 542780 0 EICCYSISCK KQLIEKMNLSAIQDREICCYSISCKEKDNI AIQDREICCYSISCKEKDNIDITLQWLIQH R E I C K E 0 0 0 0 3 0 1 0 0 2 0 1 0 0 0 2 0 0 1 0 0 0 10 0 1318.5356 Q96BM9;Q9NVJ2 Q9NVJ2 156 165 ARL8A;ARL8B ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B no no 2 0.0024773 115.7 By MS/MS 9 0 1 1 377030 377030 0 3418 2128;2656 3545 8342 5954 5954 1 216380 0 EICELTGIDQSVLER NGLDESKIKDKNELKEICELTGIDQSVLER EICELTGIDQSVLERAFSFRTVEAKQEKVS K E I E R A 0 1 0 1 1 1 3 1 0 2 2 0 0 0 0 1 1 0 0 1 0 0 15 0 1760.8615 O43795 O43795 308 322 MYO1B Unconventional myosin-Ib yes yes 2 2.9315E-38 258.78 By MS/MS 3.5 0.5 1 1 2 1470600 1470600 0 3419 223 3546 8343;8344 5955 5955 1 39952 0 EICSLFGEAPQNLSQTQR RTNDKWVIPALKQIREICSLFGEAPQNLSQ SLFGEAPQNLSQTQRSPHVFYRHDLINQLQ R E I Q R S 1 1 1 0 1 3 2 1 0 1 2 0 0 1 1 2 1 0 0 0 0 0 18 0 2076.9899 Q93008 Q93008 575 592 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2;3 1.2666E-10 162.41 By MS/MS 2.8 1.47 1 2 1 1 5 1618400 1618400 0 3420 2096 3547 8345;8346;8347;8348;8349 5956;5957;5958 5956 3 67455 0 EICYEVALADFR PRWATMADLKMQAVKEICYEVALADFRHGR AVKEICYEVALADFRHGRAEIEALAALKMR K E I F R H 2 1 0 1 1 0 2 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 12 0 1484.697 O43896 O43896 754 765 KIF1C Kinesin-like protein KIF1C yes yes 2 6.2609E-11 201.48 By MS/MS 3 0 1 1 152790 152790 0 3421 232 3548 8350 5959 5959 1 3988.6 0 EIDDSVLGQTGPYR AAFRALSQGVESVKKEIDDSVLGQTGPYRR KEIDDSVLGQTGPYRRPQRLRKRTEFAGDK K E I Y R R 0 1 0 2 0 1 1 2 0 1 1 0 0 0 1 1 1 0 1 1 0 0 14 0 1548.742 O43615 O43615 189 202 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 1.1715E-25 240 By MS/MS 7.5 0.5 1 1 2 35776000 35776000 0 3422 209 3549 8351;8352 5960;5961 5961 2 713990 0 EIDEVGDLLQLK LSAAHTKEILDTALKEIDEVGDLLQLKYSR ALKEIDEVGDLLQLKYSRHRLVPLLDRPFD K E I L K Y 0 0 0 2 0 1 2 1 0 1 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1370.7293 O15270 O15270 527 538 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 2.5629E-07 187.99 By MS/MS 6 0 1 1 1451800 1451800 0 3423 166 3550 8353 5962 5962 1 11321 0 EIDGGLETLR ASQVTLEGDKLKVEREIDGGLETLRLKLPA LKVEREIDGGLETLRLKLPAVVTADLRLNE R E I L R L 0 1 0 1 0 0 2 2 0 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1101.5666 P38117 P38117 165 174 ETFB Electron transfer flavoprotein subunit beta yes yes 2 0.029338 85.862 By MS/MS 8 0 1 1 4039900 4039900 0 3424 816 3551 8354 5963 5963 1 266510 0 EIDLFQAR SCNRQLQIDIDCLTKEIDLFQARGPHFNPS DIDCLTKEIDLFQARGPHFNPSAIHNFYDN K E I A R G 1 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 990.51345 Q9NYJ8 Q9NYJ8 612 619 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 0.008595 123.69 By MS/MS 5 0 1 1 356700 356700 0 3425 2695 3552 8355 5964 5964 1 14662 0 EIDLLLGQTDDTR AVLKNEKLRDKERRKEIDLLLGQTDDTRYH RKEIDLLLGQTDDTRYHVLVNLGKKITDYG K E I T R Y 0 1 0 3 0 1 1 1 0 1 3 0 0 0 0 0 2 0 0 0 0 0 13 0 1487.7468 O75643 O75643 156 168 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.023472 90.913 By MS/MS 1 0 1 1 0 0 0 3426 322 3553 8356 5965 5965 1 0 0 EIDSKEEK TQYSLRPRREEVKLKEIDSKEEKYVAKELA REEVKLKEIDSKEEKYVAKELAVRTFEVTP K E I E K Y 0 0 0 1 0 0 3 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 8 1 976.47131 Q14739 Q14739 179 186 LBR Lamin-B receptor yes yes 2 0.053602 128.69 By MS/MS 1.5 0.5 1 1 2 213460 213460 0 3427 1445 3554 8357;8358 5966 5966 1 10488 0 EIEDFDSLEALR SLKLNTAEDAKDVIKEIEDFDSLEALRLEG VIKEIEDFDSLEALRLEGNTVGVEAARVIA K E I L R L 1 1 0 2 0 0 3 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 12 0 1435.6831 P46060 P46060 44 55 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 5.5739E-56 290.68 By MS/MS 6.5 1.12 1 1 1 1 4 2215000 2215000 0 3428 876 3555 8359;8360;8361;8362 5967 5967 1 69835 0 EIEIDIEPTDKVER ______________________________ KEIEIDIEPTDKVERIKERVEEKEGIPPQQ K E I E R I 0 1 0 2 0 0 4 0 0 3 0 1 0 0 1 0 1 0 0 1 0 0 14 1 1684.8519 Q15843 Q15843 12 25 NEDD8 NEDD8 yes yes 2 6.7176E-05 169.21 By MS/MS 4.5 0.5 1 1 2 2799200 2799200 0 3429 1527 3556 8363;8364 5968;5969 5968 2 93646 0 EIELLCQEHGQENDDLVQR EGVEKERDFYFGKLREIELLCQEHGQENDD LCQEHGQENDDLVQRLMDILYASEEHEGHT R E I Q R L 0 1 1 2 1 3 4 1 1 1 3 0 0 0 0 0 0 0 0 1 0 0 19 0 2324.0703 Q15555 Q15555 274 292 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 3 0.0037114 81.157 By MS/MS 7.5 0.5 1 1 2 3645500 3645500 0 3430 1508 3557 8365;8366 5970 5970 1 85790 0 EIEQEAAVELSQLR KWRGKPLFVRHRTQKEIEQEAAVELSQLRD KEIEQEAAVELSQLRDPQHDLDRVKKPEWV K E I L R D 2 1 0 0 0 2 4 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 14 0 1613.8261 P47985 P47985 183 196 UQCRFS1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 2 1.3835E-46 283.47 By MS/MS 9 0 1 1 887690 887690 0 3431 899 3558 8367 5971 5971 1 509460 0 EIESEIDSEEELINK ESALKRSELVNWYLKEIESEIDSEEELINK EIESEIDSEEELINKKRIIEKVIHRLTHYD K E I N K K 0 0 1 1 0 0 6 0 0 3 1 1 0 0 0 2 0 0 0 0 0 0 15 0 1775.8313 Q14566 Q14566 755 769 MCM6 DNA replication licensing factor MCM6 yes yes 2 6.9977E-50 280.17 By MS/MS 4 0 1 1 1307900 1307900 0 3432 1436 3559 8368 5972 5972 1 35704 0 EIESSPQYR EEFRQRELRAAQLAREIESSPQYRLRIAME AAQLAREIESSPQYRLRIAMENDDGRTEEE R E I Y R L 0 1 0 0 0 1 2 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 0 1107.5197 Q8WWM7 Q8WWM7 302 310 ATXN2L Ataxin-2-like protein yes yes 2 0.0013555 136.75 By MS/MS By matching 3.33 0.471 2 1 2 1 1744200 1725200 19052 3433 2041 3560 8369;8370;8371 5973 5973 1 45524 27305 EIETYHNLLEGGQEDFESSGAGK QEYSLLLSIKMRLEKEIETYHNLLEGGQED LEGGQEDFESSGAGKIGLGGRGGSGGSYGR K E I G K I 1 0 1 1 0 1 5 4 1 1 2 1 0 1 0 2 1 0 1 0 0 0 23 0 2509.1245 P35527;CON__P35527 P35527 450 472 KRT9 Keratin, type I cytoskeletal 9 yes no 3 4.5382E-39 214.86 By MS/MS By MS/MS 5.67 2.75 1 2 1 1 1 1 1 1 6 3 6191800 5749700 442160 + 3434 791 3561 8372;8373;8374;8375;8376;8377;8378;8379;8380 5974;5975;5976;5977;5978;5979;5980 5977 7 1284900 623880 EIEVPDQYGTIR DRKIILWDHDLNPEREIEVPDQYGTIRAVA PEREIEVPDQYGTIRAVAEGKADQFLVGTS R E I I R A 0 1 0 1 0 1 2 1 0 2 0 0 0 0 1 0 1 0 1 1 0 0 12 0 1418.7042 Q9HC35 Q9HC35 545 556 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.013097 93.561 By MS/MS 1.5 0.5 1 1 2 556450 556450 0 3435 2557 3562 8381;8382 5981;5982 5981 2 27375 0 EIEYEVVR HTSQVLVDKSLKGWKEIEYEVVRDAYGNCV KSLKGWKEIEYEVVRDAYGNCVTVCNMENL K E I V R D 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 1 2 0 0 8 0 1035.5237 P27708;P31327 P27708 599 606 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial no no 2 0.019355 107.59 By MS/MS 3 1.41 1 1 1 1 1 5 2015100 2015100 0 3436 709;752 3563 8383;8384;8385;8386;8387 5983 5983 1 81486 0 EIFAQEALAPFR ETDIEDFRLCVKLTREIFAQEALAPFRGKE LTREIFAQEALAPFRGKELQPGSHIQSDKE R E I F R G 3 1 0 0 0 1 2 0 0 1 1 0 0 2 1 0 0 0 0 0 0 0 12 0 1390.7245 Q8NE62 Q8NE62 471 482 CHDH Choline dehydrogenase, mitochondrial yes yes 2 0.00044617 141.1 By MS/MS 5.5 0.5 1 1 2 1422100 1422100 0 3437 1962 3564 8388;8389 5984 5984 1 12218 0 EIFDSRGNPTVEVDLFTSK ______________________________ SRGNPTVEVDLFTSKGLFRAAVPSGASTGI R E I S K G 0 1 1 2 0 0 2 1 0 1 1 1 0 2 1 2 2 0 0 2 0 0 19 1 2153.0641 P06733 P06733 10 28 ENO1 Alpha-enolase yes yes 3 0.0041232 61.87 By MS/MS 6 0 1 1 1285700 1285700 0 3438 482 3565 8390 5985 5985 1 10026 0 EIFEQPESVVNTMR LQQIMKGNFSSFMQKEIFEQPESVVNTMRG KEIFEQPESVVNTMRGRVNFDDYTVNLGGL K E I M R G 0 1 1 0 0 1 3 0 0 1 0 0 1 1 1 1 1 0 0 2 0 0 14 0 1677.8032 Q06210 Q06210 346 359 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 4.605E-18 234.87 By MS/MS 5 0 2 2 3503600 3503600 0 3439 1274 3566;3567 8391;8392 5986;5987 5986 1033 2 144010 0 EIFITFR GVEDGQTVRMPVGKREIFITFRVQKSPVFR VRMPVGKREIFITFRVQKSPVFRRDGADIH R E I F R V 0 1 0 0 0 0 1 0 0 2 0 0 0 2 0 0 1 0 0 0 0 0 7 0 924.5069 Q96EY1 Q96EY1 326 332 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.023342 119.56 By MS/MS 8 0.816 1 1 1 3 14295000 14295000 0 3440 2169 3568 8393;8394;8395 5988 5988 1 379540 0 EIFNFVLK CNFTKSMEEDPQTSREIFNFVLKAIRPQID EDPQTSREIFNFVLKAIRPQIDLKRYAVPS R E I L K A 0 0 1 0 0 0 1 0 0 1 1 1 0 2 0 0 0 0 0 1 0 0 8 0 1008.5644 P78527 P78527 247 254 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0056545 134.66 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 3022300 3022300 0 3441 1197 3569 8396;8397;8398;8399;8400;8401;8402;8403 5989;5990;5991;5992;5993 5991 5 99025 0 EIFTNLAPFSEVSADGEK KSESHVIQDIALKTREIFTNLAPFSEVSAD TNLAPFSEVSADGEKRVLNLEALKQKRFPP R E I E K R 2 0 1 1 0 0 3 1 0 1 1 1 0 2 1 2 1 0 0 1 0 0 18 0 1952.9367 Q8TCE6;Q6NSW5 Q8TCE6 307 324 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 2 0.029743 84.297 By MS/MS 7 0 1 1 108350 108350 0 3442 1688 3570 8404 5994 5994 1 1936.2 0 EIGLLADEIEIYGK ISRGQTPKAVDVLAKEIGLLADEIEIYGKS KEIGLLADEIEIYGKSKAKVRLSVLERLKD K E I G K S 1 0 0 1 0 0 3 2 0 3 2 1 0 0 0 0 0 0 1 0 0 0 14 0 1561.8239 Q6UB35 Q6UB35 380 393 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 4.8762E-08 185.99 By MS/MS 5 0.816 1 1 1 3 5254900 5254900 0 3443 1726 3571 8405;8406;8407 5995;5996;5997 5997 3 123670 0 EIGNIISDAMK EEIAQVATISANGDKEIGNIISDAMKKVGR NGDKEIGNIISDAMKKVGRKGVITVKDGKT K E I M K K 1 0 1 1 0 0 1 1 0 3 0 1 1 0 0 1 0 0 0 0 0 0 11 0 1189.6013 P10809 P10809 181 191 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 4.8876E-11 206.49 By MS/MS By MS/MS 6.25 1.71 1 1 3 1 1 1 7 1 24187000 24083000 104550 3444 544 3572;3573 8408;8409;8410;8411;8412;8413;8414;8415 5998;5999;6000;6001;6002 5999 323 5 294080 320640 EIIDLVLDR DAANNYARGHYTIGKEIIDLVLDRIRKLAD HYTIGKEIIDLVLDRIRKLADQCTGLQGFL K E I D R I 0 1 0 2 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1084.6128 P68363;Q71U36;Q9BQE3 P68363 113 121 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 2.4987E-06 193.41 By MS/MS 5.55 2.74 1 1 1 1 1 2 1 1 1 1 11 319580000 319580000 0 3445 1185;1754;2314 3574 8416;8417;8418;8419;8420;8421;8422;8423;8424;8425;8426 6003;6004;6005;6006;6007;6008;6009;6010;6011;6012;6013;6014 6008 12 5802600 0 EIIDLVLDRIR DAANNYARGHYTIGKEIIDLVLDRIRKLAD TIGKEIIDLVLDRIRKLADQCTGLQGFLVF K E I I R K 0 2 0 2 0 0 1 0 0 3 2 0 0 0 0 0 0 0 0 1 0 0 11 1 1353.798 P68363;Q71U36;Q9BQE3 P68363 113 123 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2 1.844E-10 207.29 By MS/MS 6 0 1 1 25110000 25110000 0 3446 1185;1754;2314 3575 8427 6015 6015 1 195810 0 EIINTYTEAVQTVDPFK HEWHKRVALHQGRPREIINTYTEAVQTVDP INTYTEAVQTVDPFKATGKPHTLWVAFAKF R E I F K A 1 0 1 1 0 1 2 0 0 2 0 1 0 1 1 0 3 0 1 2 0 0 17 0 1966.9888 Q9HCS7 Q9HCS7 373 389 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 2 0.0053896 134.04 By MS/MS 4 0 1 1 123830 123830 0 3447 2564 3576 8428 6016 6016 1 3380.3 0 EIIQDVTLHDLDVANAR EEYVPLPKGDVHKKKEIIQDVTLHDLDVAN IQDVTLHDLDVANARPQGGQDILSMMGQLM K E I A R P 2 1 1 3 0 1 1 0 1 2 2 0 0 0 0 0 1 0 0 2 0 0 17 0 1920.9905 Q9Y265 Q9Y265 233 249 RUVBL1 RuvB-like 1 yes yes 2;3 2.7744E-18 206.45 By MS/MS 6.33 0.471 2 1 3 35706000 35706000 0 3448 2870 3577 8429;8430;8431 6017;6018 6018 2 279380 0 EIISFGSGYGGNSLLGK CNPEKTLIGHVPDQREIISFGSGYGGNSLL ISFGSGYGGNSLLGKKCFALRIASRLARDE R E I G K K 0 0 1 0 0 0 1 5 0 2 2 1 0 1 0 3 0 0 1 0 0 0 17 0 1697.8625 Q16822;P35558 Q16822 245 261 PCK2;PCK1 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial;Phosphoenolpyruvate carboxykinase, cytosolic [GTP] yes no 2 4.1306E-19 211.83 By MS/MS 5.5 0.5 1 1 2 3975700 3975700 0 3449 1550 3578 8432;8433 6019;6020 6020 2 43697 0 EIISNLAK PLLIDEDYYARVEGREIISNLAKAAGLATM YARVEGREIISNLAKAAGLATMISTMRPDI R E I A K A 1 0 1 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 8 0 886.51238 O75533 O75533 595 602 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0081763 125.25 By MS/MS 3.5 0.5 1 1 2 2167500 2167500 0 3450 315 3579 8434;8435 6021 6021 1 56762 0 EIKDILIQYDR LVAYYQKYVDEASKKEIKDILIQYDRTLLV ASKKEIKDILIQYDRTLLVADPRRCESKKF K E I D R T 0 1 0 2 0 1 1 0 0 3 1 1 0 0 0 0 0 0 1 0 0 0 11 1 1404.7613 P62249 P62249 107 117 RPS16 40S ribosomal protein S16 yes yes 2;3 1.936E-15 226.29 By MS/MS 10 0 2 2 10192000 10192000 0 3451 1120 3580 8436;8437 6022;6023 6023 2 10833000 0 EIKDTEKEVDDLTAELK RNLQKAQDSVLRTEKEIKDTEKEVDDLTAE KDTEKEVDDLTAELKSLEDKAAEVVKNTNA K E I L K S 1 0 0 3 0 0 4 0 0 1 2 3 0 0 0 0 2 0 0 1 0 0 17 2 1974.9997 Q9NTJ3 Q9NTJ3 947 963 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.00016373 130.02 By MS/MS 3 0 1 1 1318200 1318200 0 3452 2630 3581 8438 6024 6024 1 34412 0 EILAELTGR YRAHGFTFTRGLSVREILAELTGRKGGCAK RGLSVREILAELTGRKGGCAKGKGGSMHMY R E I G R K 1 1 0 0 0 0 2 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1000.5553 P08559 P08559 133 141 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 4.2409E-06 180.45 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 28159000 28128000 31057 3453 504 3582 8439;8440;8441;8442;8443 6025;6026;6027 6026 3 831280 127490 EILDKKVEK EESKAKFENLCKLMKEILDKKVEKVTISNR LCKLMKEILDKKVEKVTISNRLVSSPCCIV K E I E K V 0 0 0 1 0 0 2 0 0 1 1 3 0 0 0 0 0 0 0 1 0 0 9 2 1100.6441 P08238;Q58FF7 P08238 569 577 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 6.3727E-11 229.33 By MS/MS 4.5 0.5 1 1 2 2772500 2772500 0 3454 501 3583 8444;8445 6028;6029 6028 2 88167 0 EILEFPAR LQVKLYPDSRVRPTREILEFPARDVYVPNT SRVRPTREILEFPARDVYVPNTTYRNLLYI R E I A R D 1 1 0 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 8 0 973.52328 Q96N67;Q96HP0 Q96N67 544 551 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 no no 2 0.050767 91.041 By MS/MS 2 0.816 1 1 1 3 1258600 1258600 0 3455 2230;2193 3584 8446;8447;8448 6030 6030 1 52152 0 EILETLIK GIFAYLNYHVPRTRREILETLIKGLQRLEY HVPRTRREILETLIKGLQRLEYRGYDSAGV R E I I K G 0 0 0 0 0 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 8 0 957.57465 Q06210 Q06210 18 25 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.012293 114.6 By MS/MS 5 0.816 1 1 1 3 3662500 3662500 0 3456 1274 3585 8449;8450;8451 6031 6031 1 134860 0 EILSEVER KDPKACTILLRGASKEILSEVERNLQDAMQ LLRGASKEILSEVERNLQDAMQVCRNVLLD K E I E R N 0 1 0 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 973.50803 P49368 P49368 382 389 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.0094613 120.46 By MS/MS 6.29 2.37 1 1 1 1 1 1 1 7 112680000 112680000 0 3457 916 3586 8452;8453;8454;8455;8456;8457;8458 6032;6033;6034;6035;6036 6032 5 3013200 0 EILSEVERNLQDAMQVCR KDPKACTILLRGASKEILSEVERNLQDAMQ SEVERNLQDAMQVCRNVLLDPQLVPGGGAS K E I C R N 1 2 1 1 1 2 3 0 0 1 2 0 1 0 0 1 0 0 0 2 0 0 18 1 2189.0569 P49368 P49368 382 399 CCT3 T-complex protein 1 subunit gamma yes yes 3 2.6078E-07 167.92 By MS/MS 6 0 2 2 4306900 4306900 0 3458 916 3587;3588 8459;8460 6037;6038 6038 668 2 33585 0 EILVEESNVQR LIKESEVKALCAKAREILVEESNVQRVDSP AKAREILVEESNVQRVDSPVTVCGDIHGQF R E I Q R V 0 1 1 0 0 1 3 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 11 0 1314.6779 P60510 P60510 34 44 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 2 1.2386E-22 270.06 By MS/MS 8.5 0.5 1 1 2 364430 364430 0 3459 1067 3589 8461;8462 6039;6040 6039 2 209150 0 EILVGDVGQTVDDPYATFVK CLSEDKKNIILEEGKEILVGDVGQTVDDPY DVGQTVDDPYATFVKMLPDKDCRYALYDAT K E I V K M 1 0 0 3 0 1 1 2 0 1 1 1 0 1 1 0 2 0 1 4 0 0 20 0 2165.0892 P23528 P23528 54 73 CFL1 Cofilin-1 yes yes 2 0.0067392 78.326 By MS/MS 9.5 0.5 1 1 2 467450 467450 0 3460 671 3590 8463;8464 6041;6042 6041 2 436240 0 EINLLPDR FLRQELPVRLANIMKEINLLPDRVLSTPSV RLANIMKEINLLPDRVLSTPSVQLVQSWYV K E I D R V 0 1 1 1 0 0 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 8 0 968.5291 Q15119 Q15119 67 74 PDK2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes yes 2 0.012619 116.73 By MS/MS 7 0 1 1 0 0 0 3461 1480 3591 8465 6043 6043 1 0 0 EINSDQATQGNISSDR ISVTPVKNIDPVKNKEINSDQATQGNISSD INSDQATQGNISSDRGKKRTVTAAGAENIQ K E I D R G 1 1 2 2 0 2 1 1 0 2 0 0 0 0 0 3 1 0 0 0 0 0 16 0 1733.7816 Q29RF7 Q29RF7 1220 1235 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 3.8878E-63 290.17 By MS/MS 3 0 1 1 486680 486680 0 3462 1556 3592 8466 6044 6044 1 12705 0 EIPLSEILR CLTLFQNESGSKYYKEIPLSEILRISSPRD GSKYYKEIPLSEILRISSPRDFTNISQGSN K E I L R I 0 1 0 0 0 0 2 0 0 2 2 0 0 0 1 1 0 0 0 0 0 0 9 0 1068.6179 O94806 O94806 459 467 PRKD3 Serine/threonine-protein kinase D3 yes yes 2 0.025945 93.374 By MS/MS 4 0 1 1 370790 370790 0 3463 351 3593 8467 6045 6045 1 10122 0 EIPVESIEEVSK PGIEVLWTGPKVVSKEIPVESIEEVSKIIK VSKEIPVESIEEVSKIIKRAPVIWDNIHAN K E I S K I 0 0 0 0 0 0 4 0 0 2 0 1 0 0 1 2 0 0 0 2 0 0 12 0 1357.6977 O60502 O60502 258 269 MGEA5 Protein O-GlcNAcase yes yes 2 0.00013128 178.54 By MS/MS 3.5 0.5 1 1 2 4456100 4456100 0 3464 251 3594 8468;8469 6046;6047 6047 2 119230 0 EIQEAIAVANASTMH REQMGQMLTRILVIREIQEAIAVANASTMH EIQEAIAVANASTMH_______________ R E I M H - 4 0 1 0 0 1 2 0 1 2 0 0 1 0 0 1 1 0 0 1 0 0 15 0 1583.7614 Q2TAL8 Q2TAL8 762 776 QRICH1 Glutamine-rich protein 1 yes yes 2 8.0884E-05 172.33 By MS/MS 4 0 2 2 1493400 1493400 0 3465 1562 3595;3596 8470;8471 6048;6049 6049 1178 2 40769 0 EIQGFLDCAAR ACWKQNEFRDDACRKEIQGFLDCAARAQEA ACRKEIQGFLDCAARAQEARKMRSIQETLG K E I A R A 2 1 0 1 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 11 0 1278.6027 Q96BP2 Q96BP2 69 79 CHCHD1 Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 yes yes 2 3.751E-07 188.99 By MS/MS 10 0 1 1 369720 369720 0 3466 2131 3597 8472 6050 6050 1 392970 0 EIQMLAR KGVRHTMMFSATFPKEIQMLARDFLDEYIF MFSATFPKEIQMLARDFLDEYIFLAVGRVG K E I A R D 1 1 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 7 0 859.45857 O00571;O15523 O00571 388 394 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.03455 103.28 By MS/MS 4.25 0.829 1 1 2 4 3786100 3786100 0 3467 105 3598;3599 8473;8474;8475;8476 6051;6052 6051 71 2 153150 0 EIQNASHR VVSCPLKADSKAVIREIQNASHRVVMITGD DSKAVIREIQNASHRVVMITGDNPLTACHV R E I H R V 1 1 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 8 0 953.46789 Q9HD20 Q9HD20 735 742 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.003131 148.99 By MS/MS 2 0.816 1 1 1 3 223940 223940 0 3468 2566 3600 8477;8478;8479 6053;6054;6055 6053 3 9492.8 0 EIQPCLAESR EDLKVQLEHVQTRLREIQPCLAESRAAREK QTRLREIQPCLAESRAAREKESFNLKRAQE R E I S R A 1 1 0 0 1 1 2 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1201.5761 O75150 O75150 886 895 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.0064665 131.12 By MS/MS 3 0 1 1 0 0 0 3469 283 3601 8480 6056 6056 1 0 0 EIQQALVDAGDKPATFVGSR FKHQGYTERSIPTHREIQQALVDAGDKPAT LVDAGDKPATFVGSRQWIGSIEVQLVLNQL R E I S R Q 3 1 0 2 0 2 1 2 0 1 1 1 0 1 1 1 1 0 0 2 0 0 20 1 2101.0804 Q9NUQ7 Q9NUQ7 329 348 UFSP2 Ufm1-specific protease 2 yes yes 2;3 6.3701E-07 170.47 By MS/MS 6.33 0.471 2 1 3 8568000 8568000 0 3470 2640 3602 8481;8482;8483 6057;6058 6058 2 73658 0 EIQTTTGNQQVLVR YLACRDVEKGELVAKEIQTTTGNQQVLVRK KEIQTTTGNQQVLVRKLDLSDTKSIRAFAK K E I V R K 0 1 1 0 0 3 1 1 0 1 1 0 0 0 0 0 3 0 0 2 0 0 14 0 1585.8424 Q8TC12 Q8TC12 84 97 RDH11 Retinol dehydrogenase 11 yes yes 2 1.0888E-35 303.33 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 11719000 11642000 77266 3471 1992 3603 8484;8485;8486;8487 6059;6060;6061 6060 3 1252600 659180 EIQVQHPAAK MGGIVMTNDGNAILREIQVQHPAAKSMIEI NAILREIQVQHPAAKSMIEISRTQDEEVGD R E I A K S 2 0 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 10 0 1119.6037 P49368 P49368 69 78 CCT3 T-complex protein 1 subunit gamma yes yes 2 3.1275E-06 195.05 By MS/MS By matching 6.33 0.471 2 1 2 1 97274000 97226000 47567 3472 916 3604 8488;8489;8490 6062;6063 6062 2 797460 145880 EISEGDEVEVYSR PFNEVRLPPPPDIKKEISEGDEVEVYSRAN KKEISEGDEVEVYSRANDQEPCGWWLAKVR K E I S R A 0 1 0 1 0 0 4 1 0 1 0 0 0 0 0 2 0 0 1 2 0 0 13 0 1510.6787 P51114 P51114 58 70 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 2 0.00040018 138.76 By MS/MS 5 0 1 1 1057000 1057000 0 3473 957 3605 8491 6064 6064 1 43446 0 EISFAYEVLSNPEK EYHPDKNPNAGDKFKEISFAYEVLSNPEKR KEISFAYEVLSNPEKRELYDRYGEQGLREG K E I E K R 1 0 1 0 0 0 3 0 0 1 1 1 0 1 1 2 0 0 1 1 0 0 14 0 1624.7985 O60884 O60884 49 62 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 2.1923E-05 158.4 By MS/MS 7.5 1.5 1 1 2 1164400 1164400 0 3474 273 3606 8492;8493 6065;6066 6065 2 64707 0 EISGHTSGIKK LLRIYDLNKPEAEPKEISGHTSGIKKALWC AEPKEISGHTSGIKKALWCSEDKQILSADD K E I K K A 0 0 0 0 0 0 1 2 1 2 0 2 0 0 0 2 1 0 0 0 0 0 11 1 1155.6248 Q9Y3F4 Q9Y3F4 138 148 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 6.8134E-07 213.53 By MS/MS 7.5 0.5 1 1 2 2252700 2252700 0 3475 2937 3607 8494;8495 6067;6068 6067 2 60093 0 EISLLKELR RLESEEEGVPSTAIREISLLKELRHPNIVS PSTAIREISLLKELRHPNIVSLQDVLMQDS R E I L R H 0 1 0 0 0 0 2 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 1 1099.6601 P06493 P06493 51 59 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.010728 135.71 By MS/MS 8 0 1 1 1155700 1155700 0 3476 477 3608 8496 6069 6069 1 76244 0 EISLLPDNLLR FLRQELPVRLANIMKEISLLPDNLLRTPSV NIMKEISLLPDNLLRTPSVQLVQSWYIQSL K E I L R T 0 1 1 1 0 0 1 0 0 1 4 0 0 0 1 1 0 0 0 0 0 0 11 0 1281.7293 Q15118 Q15118 93 103 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.0041131 111.46 By MS/MS 7 0 1 1 1838100 1838100 0 3477 1479 3609 8497 6070 6070 1 32847 0 EISYENTQISR SSNNVRISMINNPAKEISYENTQISRAIWA NPAKEISYENTQISRAIWAALQTQTSNAAK K E I S R A 0 1 1 0 0 1 2 0 0 2 0 0 0 0 0 2 1 0 1 0 0 0 11 0 1338.6416 Q9NYU2 Q9NYU2 802 812 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 3.7526E-08 194.94 By MS/MS 3 0 1 1 1337500 1337500 0 3478 2699 3610 8498 6071 6071 1 34914 0 EITALAPSTMK GGTTMYPGIADRMQKEITALAPSTMKIKII RMQKEITALAPSTMKIKIIAPPERKYSVWI K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P60709;P63267;P68133;P68032;P62736;P63261 P60709 316 326 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 0.0005106 137.05 By MS/MS By MS/MS 7 0.632 1 3 1 2 3 9515100 8877900 637250 3479 1072;1179 3611;3612 8499;8500;8501;8502;8503 6072;6073;6074 6074 837 2 171740 2597000 EITEGDEVEVYSR PFGDVRLPPPADYNKEITEGDEVEVYSRAN NKEITEGDEVEVYSRANEQEPCGWWLARVR K E I S R A 0 1 0 1 0 0 4 1 0 1 0 0 0 0 0 1 1 0 1 2 0 0 13 0 1524.6944 P51116 P51116 68 80 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 2.5971E-05 132.32 By MS/MS 4 0 1 1 342380 342380 0 3480 958 3613 8504 6075 6075 0 9346.5 0 EITGIGPSTTTETETIAK VRIKIQHMELQLIKKEITGIGPSTTTETET GIGPSTTTETETIAKYEIMDGAPVKGESIP K E I A K Y 1 0 0 0 0 0 3 2 0 3 0 1 0 0 1 1 6 0 0 0 0 0 18 0 1847.9364 O75436 O75436 215 232 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 2.2899E-19 211.83 By MS/MS 8 0.816 1 1 1 3 10831000 10831000 0 3481 309 3614 8505;8506;8507 6076 6076 1 304000 0 EITTCLPDYYK RKQLDRLGLCFSWDREITTCLPDYYKWTQY SWDREITTCLPDYYKWTQYLFIKLYEAGLA R E I Y K W 0 0 0 1 1 0 1 0 0 1 1 1 0 0 1 0 2 0 2 0 0 0 11 0 1401.6486 Q15031 Q15031 173 183 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0092788 99.013 By MS/MS 4 0 1 1 1406000 1406000 0 3482 1467 3615 8508 6077 6077 1 38382 0 EITTEGQVQVLK TYAVGLCQSFCELLKEITTEGQVQVLKVVE LLKEITTEGQVQVLKVVENALKVNPILGPQ K E I L K V 0 0 0 0 0 2 2 1 0 1 1 1 0 0 0 0 2 0 0 2 0 0 12 0 1343.7296 Q9UI26 Q9UI26 739 750 IPO11 Importin-11 yes yes 2 6.1976E-11 201.61 By MS/MS 4 0 1 1 2882200 2882200 0 3483 2787 3616 8509 6078 6078 1 78680 0 EIVEPELSIEVCEEK AGNTGTKNKKGLETKEIVEPELSIEVCEEK EIVEPELSIEVCEEKASAVLPPTCIQLLDS K E I E K A 0 0 0 0 1 0 6 0 0 2 1 1 0 0 1 1 0 0 0 2 0 0 15 0 1801.8655 Q14008 Q14008 581 595 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.3955E-07 168.98 By MS/MS 2 0 1 1 607170 607170 0 3484 1405 3617 8510 6079;6080 6080 2 30180 0 EIVHLQAGQCGNQIGAK ______________________________ VHLQAGQCGNQIGAKFWEVISDEHGIDPTG R E I A K F 2 0 1 0 1 3 1 3 1 2 1 1 0 0 0 0 0 0 0 1 0 0 17 0 1821.9156 P68371;P04350 P68371 3 19 TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 2;3 3.8842E-55 328.26 By MS/MS By matching 6.43 0.904 1 3 2 1 6 1 337490000 337400000 94531 3485 1187;451 3618 8511;8512;8513;8514;8515;8516;8517 6081;6082;6083;6084;6085 6082 5 2802000 289920 EIVLADVIDNDSWR LVDMKIEFGVDVTTKEIVLADVIDNDSWRL KEIVLADVIDNDSWRLWPSGDRSQQKDKQS K E I W R L 1 1 1 3 0 0 1 0 0 2 1 0 0 0 0 1 0 1 0 2 0 0 14 0 1643.8155 P22234 P22234 202 215 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 1.1038E-52 269.44 By MS/MS 7 0.816 1 1 1 3 1810200 1810200 0 3486 656 3619 8518;8519;8520 6086;6087;6088 6086 3 40931 0 EIVRDIKEK ILTERGYSFTTTAEREIVRDIKEKLCYVAL TTTAEREIVRDIKEKLCYVALDFEQEMATA R E I E K L 0 1 0 1 0 0 2 0 0 2 0 2 0 0 0 0 0 0 0 1 0 0 9 2 1128.6503 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261 P60709 207 215 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEI;POTEJ;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 3 0.0070791 104.06 By MS/MS By matching 7 0 2 1 1 1698100 1653600 44503 3487 1072;1179 3620 8521;8522 6089 6089 1 29551 182690 EIVREQGLK TSPNPKYRGFFHGVREIVREQGLKGTYQGL FFHGVREIVREQGLKGTYQGLTATVLKQGS R E I L K G 0 1 0 0 0 1 2 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1070.6084 P53007 P53007 170 178 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0070051 143.28 By MS/MS 8 0 1 1 7431400 7431400 0 3488 996 3621 8523 6090 6090 1 490250 0 EIVTNFLAGFEA RADGKISEQSDAKLKEIVTNFLAGFEA___ KLKEIVTNFLAGFEA_______________ K E I E A - 2 0 1 0 0 0 2 1 0 1 1 0 0 2 0 0 1 0 0 1 0 0 12 0 1309.6554 P25705 P25705 542 553 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 7.8905E-24 238.73 By MS/MS 6 0 1 1 2813800 2813800 0 3489 687 3622 8524 6091 6091 1 21942 0 EIVVIHQDPEALK VIRDRKTIPIKYPLKEIVVIHQDPEALKDI LKEIVVIHQDPEALKDIKSLEKYIIEELNV K E I L K D 1 0 0 1 0 1 2 0 1 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1489.814 P41252 P41252 849 861 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 3.0193E-26 250.7 By MS/MS 3 0 1 1 2474400 2474400 0 3490 840 3623 8525 6092 6092 1 64595 0 EIVVIHQDPEALKDIK VIRDRKTIPIKYPLKEIVVIHQDPEALKDI IVVIHQDPEALKDIKSLEKYIIEELNVRKV K E I I K S 1 0 0 2 0 1 2 0 1 3 1 2 0 0 1 0 0 0 0 2 0 0 16 1 1846.02 P41252 P41252 849 864 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 3.39E-06 143.64 By MS/MS 3 0 1 1 1305500 1305500 0 3491 840 3624 8526 6093 6093 1 34079 0 EIYGPILER DGEIGAKGLMGPFSKEIYGPILERIKAEGI MGPFSKEIYGPILERIKAEGIIYTTQSTIK K E I E R I 0 1 0 0 0 0 2 1 0 2 1 0 0 0 1 0 0 0 1 0 0 0 9 0 1088.5866 Q9UDR5 Q9UDR5 902 910 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.036679 87.308 By MS/MS 4 0 1 1 1263900 1263900 0 3492 2762 3625 8527 6094 6094 1 34504 0 EIYHFTLEK DFCTHLPNLPDSTAKEIYHFTLEKIQPRVI PDSTAKEIYHFTLEKIQPRVISFEEQVASI K E I E K I 0 0 0 0 0 0 2 0 1 1 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1178.5972 Q9BT78 Q9BT78 83 91 COPS4 COP9 signalosome complex subunit 4 yes yes 2 0.0053783 114.89 By MS/MS 7 0 1 1 1826500 1826500 0 3493 2347 3626 8528 6095;6096 6096 2 32640 0 EIYNEKELLQGK DRHLVFPLLEFLSVKEIYNEKELLQGKLDL SVKEIYNEKELLQGKLDLLSDTNMVDFAMD K E I G K L 0 0 1 0 0 1 3 1 0 1 2 2 0 0 0 0 0 0 1 0 0 0 12 1 1462.7668 P60228 P60228 30 41 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2;3 2.809E-06 203.02 By MS/MS 6.2 0.748 1 2 2 5 13406000 13406000 0 3494 1065 3627 8529;8530;8531;8532;8533 6097;6098 6097 2 126180 0 EIYQEALK LAAVLMHRERYTQAKEIYQEALKQAKLKKD ERYTQAKEIYQEALKQAKLKKDEISVQHIR K E I L K Q 1 0 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 992.51786 Q6DKK2 Q6DKK2 339 346 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 0.0034376 143.12 By MS/MS 8 0 1 1 0 0 0 3495 1679 3628 8534 6099 6099 1 0 0 EKALEHK EQQEEERITTMQLEREKALEHKNRMSRMLE ITTMQLEREKALEHKNRMSRMLEDRDLFVM R E K H K N 1 0 0 0 0 0 2 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 7 1 853.46577 Q14152 Q14152 741 747 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.018774 188.81 By MS/MS 2.5 0.5 1 1 2 385350 385350 0 3496 1409 3629 8535;8536 6100 6100 1 11693 0 EKALQFLEEVK GLHPRIITEGFEAAKEKALQFLEEVKVSRE EAAKEKALQFLEEVKVSREMDRETLIDVAR K E K V K V 1 0 0 0 0 1 3 0 0 0 2 2 0 1 0 0 0 0 0 1 0 0 11 1 1332.7289 P40227 P40227 128 138 CCT6A T-complex protein 1 subunit zeta yes yes 2 3.4643E-15 220.82 By MS/MS 6.5 0.5 1 1 2 5060000 5060000 0 3497 828 3630 8537;8538 6101 6101 1 40994 0 EKALQFLEEVKVSR GLHPRIITEGFEAAKEKALQFLEEVKVSRE KEKALQFLEEVKVSREMDRETLIDVARTSL K E K S R E 1 1 0 0 0 1 3 0 0 0 2 2 0 1 0 1 0 0 0 2 0 0 14 2 1674.9305 P40227 P40227 128 141 CCT6A T-complex protein 1 subunit zeta yes yes 3 0.00063543 124.81 By MS/MS 6 0 1 1 3440700 3440700 0 3498 828 3631 8539 6102 6102 1 26831 0 EKAPSIIFIDELDAIGTK GDGAKLVRDAFALAKEKAPSIIFIDELDAI PSIIFIDELDAIGTKRFDSEKAGDREVQRT K E K T K R 2 0 0 2 0 0 2 1 0 4 1 2 0 1 1 1 1 0 0 0 0 0 18 1 1959.0565 P17980 P17980 277 294 PSMC3 26S protease regulatory subunit 6A yes yes 2;3 1.2567E-32 238.67 By MS/MS 6 0 2 2 13031000 13031000 0 3499 618 3632 8540;8541 6103;6104 6104 2 101620 0 EKAPSIIFIDELDAIGTKR GDGAKLVRDAFALAKEKAPSIIFIDELDAI SIIFIDELDAIGTKRFDSEKAGDREVQRTM K E K K R F 2 1 0 2 0 0 2 1 0 4 1 2 0 1 1 1 1 0 0 0 0 0 19 2 2115.1576 P17980 P17980 277 295 PSMC3 26S protease regulatory subunit 6A yes yes 4 0.0024517 81.713 By MS/MS 6 0 1 1 1132000 1132000 0 3500 618 3633 8542 6105 6105 1 8827.1 0 EKDFIILSCVR YQEVEIASVDAFQGREKDFIILSCVRANEH FQGREKDFIILSCVRANEHQGIGFLNDPRR R E K V R A 0 1 0 1 1 0 1 0 0 2 1 1 0 1 0 1 0 0 0 1 0 0 11 1 1378.7279 Q92900 Q92900 844 854 UPF1 Regulator of nonsense transcripts 1 yes yes 3 0.00026582 144.7 By MS/MS 3.5 0.5 1 1 2 542270 542270 0 3501 2088 3634 8543;8544 6106 6106 1 14238 0 EKDFSPEALKK LKAYRLTPKLMEVCKEKDFSPEALKKANIT EVCKEKDFSPEALKKANITFEYMFEEVPIV K E K K K A 1 0 0 1 0 0 2 0 0 0 1 3 0 1 1 1 0 0 0 0 0 0 11 2 1290.682 O15372 O15372 179 189 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 3 0.03854 82.831 By MS/MS 7 0 1 1 3379400 3379400 0 3502 173 3635 8545 6107 6107 1 60391 0 EKDILTAIAADLCK RLQQLEALRRMVQEREKDILTAIAADLCKS REKDILTAIAADLCKSEFNVYSQEVITVLG R E K C K S 3 0 0 2 1 0 1 0 0 2 2 2 0 0 0 0 1 0 0 0 0 0 14 1 1559.8229 P51648 P51648 38 51 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2;3 3.1862E-11 240.18 By MS/MS 6 0 2 2 10310000 10310000 0 3503 972 3636 8546;8547 6108;6109 6109 2 80397 0 EKDILVLPLDLTDTGSHEAATK LERVKRRCLENGNLKEKDILVLPLDLTDTG PLDLTDTGSHEAATKAVLQEFGRIDILVNN K E K T K A 2 0 0 3 0 0 2 1 1 1 4 2 0 0 1 1 3 0 0 1 0 0 22 1 2365.2377 Q9Y394 Q9Y394 102 123 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 3 9.8511E-05 96.455 By MS/MS 8 0 1 1 240180 240180 0 3504 2919 3637 8548 6110 6110 1 15844 0 EKDIQEESTFSSR GGLLSPARLYAIAAKEKDIQEESTFSSRKI AKEKDIQEESTFSSRKISNQFDWALMRLDL K E K S R K 0 1 0 1 0 1 3 0 0 1 0 1 0 1 0 3 1 0 0 0 0 0 13 1 1554.7162 P42704 P42704 65 77 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 2.9233E-45 282.05 By MS/MS By MS/MS 5.61 2.5 1 4 2 2 2 2 2 2 1 16 2 91170000 90511000 658160 3505 854 3638 8549;8550;8551;8552;8553;8554;8555;8556;8557;8558;8559;8560;8561;8562;8563;8564;8565;8566 6111;6112;6113;6114;6115;6116;6117;6118;6119 6115 8 2710800 943270 EKDIQEESTFSSRK GGLLSPARLYAIAAKEKDIQEESTFSSRKI KEKDIQEESTFSSRKISNQFDWALMRLDLS K E K R K I 0 1 0 1 0 1 3 0 0 1 0 2 0 1 0 3 1 0 0 0 0 0 14 2 1682.8111 P42704 P42704 65 78 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.0060153 91.307 By MS/MS 3 0 1 1 0 0 0 3506 854 3639 8567 6120 6120 1 0 0 EKDRDPEAQFEMPYVVR PISSSKLYNEVRACREKDRDPEAQFEMPYV DRDPEAQFEMPYVVRLHNFHQLSAPQPCFT R E K V R L 1 2 0 2 0 1 3 0 0 0 0 1 1 1 2 0 0 0 1 2 0 0 17 2 2107.9997 O14744 O14744 489 505 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 3;4 0.027693 67.646 By MS/MS 5 0 2 2 1383000 1383000 0 3507 125 3640 8568;8569 6121;6122 6122 2 56846 0 EKEAEDGIIAYDDCGVK ATFSNPKTTSPNKGKEKEAEDGIIAYDDCG EAEDGIIAYDDCGVKLTIAFQAKDVEGSTS K E K V K L 2 0 0 3 1 0 3 2 0 2 0 2 0 0 0 0 0 0 1 1 0 0 17 1 1910.8568 O75534 O75534 451 467 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.0052668 74.141 By MS/MS 4.5 0.5 1 1 2 1685400 1685400 0 3508 316 3641 8570;8571 6123 6123 1 65489 0 EKEDDVPQFTSAGENFDKLLAGK TADMTKGLVLGIYSKEKEDDVPQFTSAGEN FTSAGENFDKLLAGKLRETLNISGPPLKAG K E K G K L 2 0 1 3 0 1 3 2 0 0 2 3 0 2 1 1 1 0 0 1 0 0 23 2 2537.2286 P28838 P28838 44 66 LAP3 Cytosol aminopeptidase yes yes 3 0.00104 80.016 By MS/MS 6 0 1 1 3142200 3142200 0 3509 722 3642 8572 6124 6124 1 24503 0 EKEEADLLLEQQR EMEKRLQDLENQYRKEKEEADLLLEQQRLY RKEKEEADLLLEQQRLYADSDSGDDSDKRS K E K Q R L 1 1 0 1 0 2 4 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 13 1 1599.8104 O43896;O60333 O43896 657 669 KIF1C;KIF1B Kinesin-like protein KIF1C;Kinesin-like protein KIF1B no no 2;3 2.9565E-25 250.26 By MS/MS 3.5 0.5 2 2 4 3528000 3528000 0 3510 232;245 3643 8573;8574;8575;8576 6125;6126 6126 2 93829 0 EKEELEQR IEERKERLESLNIQREKEELEQREAELQKV ESLNIQREKEELEQREAELQKVRKAEEERL R E K Q R E 0 1 0 0 0 1 4 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1059.5197 Q14152 Q14152 590 597 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.011422 145.16 By MS/MS 3 0 1 1 0 0 0 3511 1409 3644 8577 6127 6127 1 0 0 EKEELEQREAELQK IEERKERLESLNIQREKEELEQREAELQKV REKEELEQREAELQKVRKAEEERLRQEAKE R E K Q K V 1 1 0 0 0 2 6 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 14 2 1757.8796 Q14152 Q14152 590 603 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 5.3644E-25 248.19 By MS/MS 3 1.29 1 1 2 1 1 6 22024000 22024000 0 3512 1409 3645 8578;8579;8580;8581;8582;8583 6128;6129 6129 2 591860 0 EKEELIEEWQPEPLVPPVPK SKTYKLQERSDLTVKEKEELIEEWQPEPLV IEEWQPEPLVPPVPKDHPALNYNIVSGPPS K E K P K D 0 0 0 0 0 1 6 0 0 1 2 2 0 0 5 0 0 1 0 2 0 0 20 1 2385.2468 O15269 O15269 56 75 SPTLC1 Serine palmitoyltransferase 1 yes yes 2;3 6.4237E-13 169.67 By MS/MS 6 0 2 2 21579000 21579000 0 3513 165 3646 8584;8585 6130;6131 6130 2 168270 0 EKEPVVVETVEEK VSGTPCREFWSRFRKEKEPVVVETVEEKKE RKEKEPVVVETVEEKKEPILVCPPLRSRAY K E K E K K 0 0 0 0 0 0 5 0 0 0 0 2 0 0 1 0 1 0 0 4 0 0 13 1 1513.7876 Q8N5N7 Q8N5N7 33 45 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 3 0.035733 68.171 By MS/MS 10 0 1 1 0 0 0 3514 1925 3647 8586 6132 6132 1 0 0 EKFEEMIQQIK VTSVEDYKALQKYEKEKFEEMIQQIKETGA KYEKEKFEEMIQQIKETGANLAICQWGFDD K E K I K E 0 0 0 0 0 2 3 0 0 2 0 2 1 1 0 0 0 0 0 0 0 0 11 1 1421.7225 P48643 P48643 283 293 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 1.6713E-28 261.16 By MS/MS 6 0 2 2 29013000 29013000 0 3515 909 3648 8587;8588 6133;6134 6133 2 226240 0 EKFENLGIQPPK IQELVEAIVLPMNHKEKFENLGIQPPKGVL NHKEKFENLGIQPPKGVLMYGPPGTGKTLL K E K P K G 0 0 1 0 0 1 2 1 0 1 1 2 0 1 2 0 0 0 0 0 0 0 12 1 1398.7507 P17980 P17980 210 221 PSMC3 26S protease regulatory subunit 6A yes yes 2 2.5289E-10 207.34 By MS/MS 6 0 1 1 2775900 2775900 0 3516 618 3649 8589 6135 6135 1 21647 0 EKLEATINELV FKKGQKVGEFSGANKEKLEATINELV____ GANKEKLEATINELV_______________ K E K L V - 1 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 11 1 1257.6816 P10599 P10599 95 105 TXN Thioredoxin yes yes 2 2.4865E-21 243.53 By MS/MS 10 0 1 1 1109100 1109100 0 3517 539 3650 8590 6136;6137 6137 2 1178900 0 EKLEQAAIVK KSFEKAKESWEMDTKEKLEQAAIVKEKGTV EMDTKEKLEQAAIVKEKGTVYFKGGKYMQA K E K V K E 2 0 0 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 10 1 1127.655 Q13451 Q13451 263 272 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 2 0.013764 117.71 By MS/MS 6 0 1 1 1405300 1405300 0 3518 1372 3651 8591 6138 6138 1 10958 0 EKLEVTWEK EVDLTGSVPVHAKTKEKLEVTWEKMSKSKH VHAKTKEKLEVTWEKMSKSKHNGVDPEEVV K E K E K M 0 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 9 1 1160.6077 Q15031 Q15031 631 639 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.010839 125.82 By MS/MS 4.5 0.5 1 1 2 2043800 2043800 0 3519 1467 3652 8592;8593 6139 6139 1 60594 0 EKLPGELEPVQATQNK QKELAEQLGLSTGEKEKLPGELEPVQATQN KLPGELEPVQATQNKTGKYVPPSLRDGASR K E K N K T 1 0 1 0 0 2 3 1 0 0 2 2 0 0 2 0 1 0 0 1 0 0 16 1 1779.9367 O75821 O75821 194 209 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 5.3288E-15 234.87 By MS/MS 7.33 0.471 2 1 3 7227700 7227700 0 3520 330 3653 8594;8595;8596 6140;6141 6141 2 137140 0 EKLVLTTLDFQK RAIHSRLSRQSISTREKLVLTTLDFQKALR STREKLVLTTLDFQKALRGFLPASLRSVNL R E K Q K A 0 0 0 1 0 1 1 0 0 0 3 2 0 1 0 0 2 0 0 1 0 0 12 1 1433.813 O43933 O43933 805 816 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.00066988 128.01 By MS/MS 3 0 1 1 435030 435030 0 3521 235 3654 8597 6142 6142 0 11356 0 EKNQPKPSPK LGPWPAASHGGKYSREKNQPKPSPKRESGE GKYSREKNQPKPSPKRESGEEFRMEKLNQL R E K P K R 0 0 1 0 0 1 1 0 0 0 0 3 0 0 3 1 0 0 0 0 0 0 10 2 1151.6299 P30533 P30533 38 47 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 2 0.0048808 141.52 By MS/MS 7 0 1 1 79488 79488 0 3522 743 3655 8598 6143 6143 1 1420.5 0 EKNVQGIIEILK IRPHYFWPLLVGRRKEKNVQGIIEILKGMQ RRKEKNVQGIIEILKGMQELGVHPDQETYT K E K L K G 0 0 1 0 0 1 2 1 0 3 1 2 0 0 0 0 0 0 0 1 0 0 12 1 1382.8133 P42704 P42704 452 463 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 4.7277E-32 279.9 By MS/MS 4.5 1.12 1 1 1 1 4 4980900 4980900 0 3523 854 3656 8599;8600;8601;8602 6144 6144 1 128220 0 EKPPITVVGDVGGR ATVHPGLELPLMMAKEKPPITVVGDVGGRI KEKPPITVVGDVGGRIAIIVDDIIDDVESF K E K G R I 0 1 0 1 0 0 1 3 0 1 0 1 0 0 2 0 1 0 0 3 0 0 14 1 1422.7831 Q14558;O60256 Q14558 237 250 PRPSAP1;PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 1;Phosphoribosyl pyrophosphate synthase-associated protein 2 no no 3 0.0018269 108.23 By MS/MS 7 0 1 1 1239700 1239700 0 3524 1435;239 3657 8603 6145 6145 1 22154 0 EKPVDLQNFGLR VPAAQQMLNFPEKNKEKPVDLQNFGLRTDI KNKEKPVDLQNFGLRTDIYSKKTLAKSKGA K E K L R T 0 1 1 1 0 1 1 1 0 0 2 1 0 1 1 0 0 0 0 1 0 0 12 1 1414.7569 Q92922 Q92922 591 602 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2;3 0.00025298 139.38 By MS/MS 3.33 0.471 2 1 3 1060700 1060700 0 3525 2090 3658 8604;8605;8606 6146;6147 6146 2 27856 0 EKQDTFALASQQK GITSENVAERFGISREKQDTFALASQQKAA SREKQDTFALASQQKAARAQSKGCFQAEIV R E K Q K A 2 0 0 1 0 3 1 0 0 0 1 2 0 1 0 1 1 0 0 0 0 0 13 1 1492.7522 P09110 P09110 197 209 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2 0.0055709 166.11 By MS/MS 7.5 0.5 1 1 2 1598600 1598600 0 3526 511 3659 8607;8608 6148 6148 1 37136 0 EKQEEEEAK EEVACRKEEEERKAREKQEEEEAKCLEKFQ EERKAREKQEEEEAKCLEKFQDADPLEQDE R E K A K C 1 0 0 0 0 1 5 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 9 1 1118.5091 Q7Z6Z7 Q7Z6Z7 1412 1420 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.048137 112.41 By MS/MS 1.5 0.5 1 1 2 69326 69326 0 3527 1803 3660 8609;8610 6149 6149 1 3418.1 0 EKQEEEEAKCLEK EEVACRKEEEERKAREKQEEEEAKCLEKFQ AREKQEEEEAKCLEKFQDADPLEQDELHTF R E K E K F 1 0 0 0 1 1 6 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 13 2 1648.7614 Q7Z6Z7 Q7Z6Z7 1412 1424 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.00089802 127.52 By MS/MS 1.5 0.5 1 1 2 1124900 1124900 0 3528 1803 3661 8611;8612 6150;6151 6150 2 55249 0 EKQLAAENR EEEMMAKEEELVKVREKQLAAENRLTEMET ELVKVREKQLAAENRLTEMETLQSQLMAEK R E K N R L 2 1 1 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1057.5516 P35579 P35579 859 867 MYH9 Myosin-9 yes yes 2 0.012026 156.83 By MS/MS 2 0 1 1 0 0 0 3529 793 3662 8613 6152 6152 1 0 0 EKQPPIDNIIR NQLQATQAARKLLSREKQPPIDNIIRAGLI LLSREKQPPIDNIIRAGLIPKFVSFLGRTD R E K I R A 0 1 1 1 0 1 1 0 0 3 0 1 0 0 2 0 0 0 0 0 0 0 11 1 1321.7354 P52292 P52292 107 117 KPNA2 Importin subunit alpha-1 yes yes 2;3 0.0014944 131.12 By MS/MS By matching 6.2 0.98 1 3 1 4 1 27443000 27422000 21863 3530 983 3663 8614;8615;8616;8617;8618 6153;6154;6155 6154 3 219140 67051 EKRQEQIAK AEYAKLLAKRMKEAKEKRQEQIAKRRRLSS RMKEAKEKRQEQIAKRRRLSSLRASTSKSE K E K A K R 1 1 0 0 0 2 2 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1128.6251 P62753 P62753 222 230 RPS6 40S ribosomal protein S6 yes yes 2 3.13E-05 177.7 By MS/MS 8 0 1 1 726670 726670 0 3531 1143 3664 8619 6156 6156 1 47938 0 EKVVPLYGR PERQECPVCKAGISREKVVPLYGRGSQKPQ KAGISREKVVPLYGRGSQKPQDPRLKTPPR R E K G R G 0 1 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 9 1 1059.6077 Q99942 Q99942 74 82 RNF5 E3 ubiquitin-protein ligase RNF5 yes yes 2;3 0.014922 125.31 By MS/MS 9 0 2 2 3165200 3165200 0 3532 2298 3665 8620;8621 6157;6158 6158 2 1816500 0 EKYIDQEELNK DDSGKDKKKKTKKIKEKYIDQEELNKTKPI KKIKEKYIDQEELNKTKPIWTRNPDDITQE K E K N K T 0 0 1 1 0 1 3 0 0 1 1 2 0 0 0 0 0 0 1 0 0 0 11 1 1407.6882 P07900;Q14568;P08238;Q58FF8 P08238 274 284 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2;3 1.3042E-28 305.4 By MS/MS 5 0.816 2 2 2 6 9106600 9106600 0 3533 501;494 3666 8622;8623;8624;8625;8626;8627 6159;6160;6161;6162 6161 4 258070 0 ELAAQLNEEAK RNEMTAEEKRRAHQKELAAQLNEEAKRRLT AHQKELAAQLNEEAKRRLTEQKGEQQIQKA K E L A K R 3 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1214.6143 Q9Y5B9 Q9Y5B9 480 490 SUPT16H FACT complex subunit SPT16 yes yes 2 9.0828E-11 204.34 By MS/MS 2 0.816 1 1 1 3 1869700 1869700 0 3534 2968 3667 8628;8629;8630 6163;6164;6165 6163 3 66864 0 ELAAVCGDPSTDPPLLTR LTGEGLDGLLEALRKELAAVCGDPSTDPPL AVCGDPSTDPPLLTRARHQHHLQGCLDALG K E L T R A 2 1 0 2 1 0 1 1 0 0 3 0 0 0 3 1 2 0 0 1 0 0 18 0 1910.9408 Q969Y2 Q969Y2 414 431 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 1.6465E-19 212.55 By MS/MS 7 0 1 1 1747300 1747300 0 3535 2111 3668 8631 6166 6166 1 31224 0 ELAEAVAGGR ______________________________ RGLPRELAEAVAGGRVLVVGAGGIGCELLK R E L G R V 3 1 0 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 971.50361 Q9UBT2 Q9UBT2 10 19 UBA2 SUMO-activating enzyme subunit 2 yes yes 2 0.0016218 118.5 By MS/MS 4 0 1 1 637450 637450 0 3536 2757 3669 8632 6167 6167 1 17402 0 ELAEDDSILK AEEKKKQDELKRIARELAEDDSILK_____ KRIARELAEDDSILK_______________ R E L L K - 1 0 0 2 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5659 P56385 P56385 60 69 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 1.291E-10 204.42 By MS/MS By matching 10 0 4 3 1 39678000 39524000 154080 3537 1046 3670 8633;8634;8635;8636 6168;6169;6170 6170 3 42009000 3952100 ELAEDGYSGVEVR ADGIFKAELNEFLTRELAEDGYSGVEVRVT TRELAEDGYSGVEVRVTPTRTEIIILATRT R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 P23396 P23396 28 40 RPS3 40S ribosomal protein S3 yes yes 2 7.5722E-46 275.11 By MS/MS By MS/MS 6.75 3.11 1 1 4 1 1 6 2 49715000 49182000 532510 3538 668 3671 8637;8638;8639;8640;8641;8642;8643;8644 6171;6172;6173;6174;6175;6176;6177;6178;6179;6180 6175 10 3673300 4542900 ELAEQLGLSTGEK TTRCPYKDTLGPMQKELAEQLGLSTGEKEK QKELAEQLGLSTGEKEKLPGELEPVQATQN K E L E K E 1 0 0 0 0 1 3 2 0 0 3 1 0 0 0 1 1 0 0 0 0 0 13 0 1373.7038 O75821 O75821 181 193 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 2.208E-18 231.07 By MS/MS By MS/MS 7.8 0.748 2 2 1 3 2 47669000 47320000 348990 3539 330 3672 8645;8646;8647;8648;8649 6181;6182;6183;6184 6182 4 1862500 1642100 ELAEQLGLSTGEKEK TTRCPYKDTLGPMQKELAEQLGLSTGEKEK ELAEQLGLSTGEKEKLPGELEPVQATQNKT K E L E K L 1 0 0 0 0 1 4 2 0 0 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1630.8414 O75821 O75821 181 195 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 4.1784E-49 315.41 By MS/MS 7.5 0.5 1 1 2 4765000 4765000 0 3540 330 3673 8650;8651 6185 6185 1 103240 0 ELAEQTLNNIK FLPNAPKALIVEPSRELAEQTLNNIKQFKK EPSRELAEQTLNNIKQFKKYIDNPKLRELL R E L I K Q 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1271.6721 Q92499 Q92499 297 307 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.0039129 112.3 By MS/MS 5 0 1 1 7831900 7831900 0 3541 2051 3674 8652 6186 6186 1 321920 0 ELAESDFASTFR GVYVFGELLDMPNVRELAESDFASTFRLLT NVRELAESDFASTFRLLTVFAYGTYADYLA R E L F R L 2 1 0 1 0 0 2 0 0 0 1 0 0 2 0 2 1 0 0 0 0 0 12 0 1371.6307 Q9UBW8 Q9UBW8 54 65 COPS7A COP9 signalosome complex subunit 7a yes yes 2 4.4712E-11 205.18 By MS/MS 7.5 0.5 1 1 2 3352800 3352800 0 3542 2760 3675 8653;8654 6187 6187 1 216900 0 ELAFATEQDPPDAK TPVEVAIEDMQKKTRELAFATEQDPPDAKM RELAFATEQDPPDAKMLQMVLQGSVGPTVN R E L A K M 3 0 0 2 0 1 2 0 0 0 1 1 0 1 2 0 1 0 0 0 0 0 14 0 1530.7202 Q96HP0 Q96HP0 1915 1928 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.00038474 135.1 By MS/MS 2 0 1 1 314570 314570 0 3543 2193 3676 8655 6188 6188 1 15636 0 ELAGHTGYLSCCR IYNLKTREGNVRVSRELAGHTGYLSCCRFL SRELAGHTGYLSCCRFLDDNQIVTSSGDTT R E L C R F 1 1 0 0 2 0 1 2 1 0 2 0 0 0 0 1 1 0 1 0 0 0 13 0 1522.6657 P62873 P62873 138 150 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 2 0.004414 106.62 By MS/MS 8 0 1 1 383590 383590 0 3544 1154 3677 8656 6189 6189 1 25305 0 ELAHCQK LPHSAAPARKAELRRELAHCQKVAREMHSL ARKAELRRELAHCQKVAREMHSLRAEALYR R E L Q K V 1 0 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 7 0 884.41744 O00411 O00411 761 767 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.021238 122.98 By MS/MS 3.5 0.5 1 1 2 548040 548040 0 3545 92 3678 8657;8658 6190 6190 1 14417 0 ELAICTVGR QALFVALNDQVFEIRELAICTVGRLSSMNP QVFEIRELAICTVGRLSSMNPAFVMPFLRK R E L G R L 1 1 0 0 1 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1017.5277 P42345 P42345 709 717 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.017806 104.44 By MS/MS 2 0 1 1 0 0 0 3546 849 3679 8659 6191 6191 1 0 0 ELALALQEALEPAVR AGRRRRAPPGGCEERELALALQEALEPAVR ELALALQEALEPAVRLGRYPRAQLEVSALL R E L V R L 4 1 0 0 0 1 3 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 15 0 1621.9039 Q5RKV6 Q5RKV6 121 135 EXOSC6 Exosome complex component MTR3 yes yes 2 0.0048591 104.94 By MS/MS 8 0 1 1 157150 157150 0 3547 1615 3680 8660 6192 6192 1 10367 0 ELALECDYQR PEGLFPEHLIDVLRRELALECDYQREAACA DVLRRELALECDYQREAACARKFRDLLKGH R E L Q R E 1 1 0 1 1 1 2 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1295.5816 Q8NI60 Q8NI60 401 410 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 1.7454E-28 252.72 By MS/MS 6.5 0.5 1 1 2 7743600 7743600 0 3548 1978 3681 8661;8662 6193;6194 6193 2 67370 0 ELALPGELTQSR FNDKSNTHEFVNLVKELALPGELTQSRSYD LVKELALPGELTQSRSYDFEFMQVEKPYES K E L S R S 1 1 0 0 0 1 2 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 12 0 1312.6987 O75436 O75436 94 105 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 0.0004881 139.15 By MS/MS 7 0 1 1 9757300 9757300 0 3549 309 3682 8663 6195 6195 1 174370 0 ELALQQEEGK GTDRKVFFNILEEARELALQQEEGKTVMYT LEEARELALQQEEGKTVMYTAVGSEWRPFG R E L G K T 1 0 0 0 0 2 3 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1143.5772 Q9Y276 Q9Y276 156 165 BCS1L Mitochondrial chaperone BCS1 yes yes 2 1.6E-10 230.06 By MS/MS By matching 7 0 2 1 1 2908900 2892100 16837 3550 2872 3683 8664;8665 6196 6196 1 51682 69117 ELAMPGEDLK LTWDMACRIILPPEKELAMPGEDLKFNLIL LPPEKELAMPGEDLKFNLILRQPMILEKGQ K E L L K F 1 0 0 1 0 0 2 1 0 0 2 1 1 0 1 0 0 0 0 0 0 0 10 0 1101.5376 P49411 P49411 396 405 TUFM Elongation factor Tu, mitochondrial yes yes 2 3.0023E-05 171.99 By MS/MS 7.5 0.5 2 2 4 19691000 19691000 0 3551 918 3684;3685 8666;8667;8668;8669 6197;6198;6199 6197 681 3 385090 0 ELAPAVSVLQLFCSSPK EAASAIVNLPGCSAKELAPAVSVLQLFCSS APAVSVLQLFCSSPKAALRYAAVRTLNKVA K E L P K A 2 0 0 0 1 1 1 0 0 0 3 1 0 1 2 3 0 0 0 2 0 0 17 0 1844.9706 Q9Y678;Q9UBF2 Q9Y678 284 300 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 2.2793E-18 200.19 By MS/MS 5 1 1 1 2 571970 571970 0 3552 2996;2748 3686 8670;8671 6200;6201;6202 6202 3 7803.6 0 ELAPLFEELR ASSSANTGLIVSLEKELAPLFEELRQVVEV VSLEKELAPLFEELRQVVEVS_________ K E L L R Q 1 1 0 0 0 0 3 0 0 0 3 0 0 1 1 0 0 0 0 0 0 0 10 0 1215.6499 Q9UHA4 Q9UHA4 109 118 LAMTOR3 Ragulator complex protein LAMTOR3 yes yes 2 0.0066998 101.9 By MS/MS 10 0 1 1 145470 145470 0 3553 2778 3687 8672 6203 6203 1 154620 0 ELAPLQELIEK HFIFFVQEFNLIDRRELAPLQELIEKLGSK IDRRELAPLQELIEKLGSKDR_________ R E L E K L 1 0 0 0 0 1 3 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 11 0 1281.718 Q9H8S9;Q7L9L4 Q9H8S9 200 210 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 2 0.00037682 147.75 By MS/MS 9 0.816 1 1 1 3 2509200 2509200 0 3554 1771 3688 8673;8674;8675 6204;6205 6205 2 1397100 0 ELAPYDENWFYTR KVPEWVDTVKLAKHKELAPYDENWFYTRAA HKELAPYDENWFYTRAASTARHLYLRGGAG K E L T R A 1 1 1 1 0 0 2 0 0 0 1 0 0 1 1 0 1 1 2 0 0 0 13 0 1702.7627 P39019 P39019 44 56 RPS19 40S ribosomal protein S19 yes yes 2 0.00057532 140.63 By MS/MS 10 0 1 1 272030 272030 0 3555 823 3689 8676 6206 6206 1 289140 0 ELAQQIQK LDLKATQALVLAPTRELAQQIQKVVMALGD LVLAPTRELAQQIQKVVMALGDYMGASCHA R E L Q K V 1 0 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 956.5291 P60842;Q14240 P60842 111 118 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 1.0112E-19 261.13 By MS/MS By MS/MS 5.69 2.55 1 1 1 1 1 3 2 1 1 1 11 2 1601100000 1601000000 132990 3556 1074 3690 8677;8678;8679;8680;8681;8682;8683;8684;8685;8686;8687;8688;8689 6207;6208;6209;6210;6211;6212;6213;6214;6215;6216;6217;6218;6219 6214 13 29176000 444580 ELAQQVQQVAAEYCR ERGDGPICLVLAPTRELAQQVQQVAAEYCR ELAQQVQQVAAEYCRACRLKSTCIYGGAPK R E L C R A 3 1 0 0 1 4 2 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 15 0 1791.8574 P17844 P17844 178 192 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 8.3039E-06 175.88 By MS/MS 5 0 1 1 1518000 1518000 0 3557 616 3691 8690 6220 6220 1 62394 0 ELAQQVQQVADDYGK ERGDGPICLVLAPTRELAQQVQQVADDYGK ELAQQVQQVADDYGKCSRLKSTCIYGGAPK R E L G K C 2 0 0 2 0 4 1 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 15 0 1690.8162 Q92841 Q92841 255 269 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 5.0311E-63 297.5 By MS/MS 5 0 1 1 2887100 2887100 0 3558 2082 3692 8691 6221 6221 1 118670 0 ELAQTTR SGLEEAVYRNIQACKELAQTTRTAYGPNGM YRNIQACKELAQTTRTAYGPNGMNKMVINH K E L T R T 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 7 0 817.42938 P50990 P50990 38 44 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0065124 171.38 By MS/MS 6 0 1 1 74542000 74542000 0 3559 955 3693 8692 6222 6222 1 581280 0 ELAVQIQK IQVRETQALILAPTRELAVQIQKGLLALGD LILAPTRELAVQIQKGLLALGDYMNVQCHA R E L Q K G 1 0 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 927.53893 P38919 P38919 117 124 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 2 0.0072883 128.57 By MS/MS 6 0.816 1 1 1 3 4013500 4013500 0 3560 821 3694 8693;8694;8695 6223 6223 1 46848 0 ELAVQIYEEAR RRKQYPISLVLAPTRELAVQIYEEARKFSY APTRELAVQIYEEARKFSYRSRVRPCVVYG R E L A R K 2 1 0 0 0 1 3 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1319.6721 O00571;O15523 O00571 277 287 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 5.9841E-22 236.92 By MS/MS By matching 5 0 2 1 1 9817200 9768600 48606 3561 105 3695 8696;8697 6224 6224 1 401530 143830 ELAVQIYEEARK RRKQYPISLVLAPTRELAVQIYEEARKFSY PTRELAVQIYEEARKFSYRSRVRPCVVYGG R E L R K F 2 1 0 0 0 1 3 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 12 1 1447.7671 O00571;O15523 O00571 277 288 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 1.9904E-11 213.35 By MS/MS 6 0.816 1 1 1 3 5615500 5615500 0 3562 105 3696 8698;8699;8700 6225;6226 6225 2 198860 0 ELCGTPGYLAPEILK DFGFSCHLEPGEKLRELCGTPGYLAPEILK ELCGTPGYLAPEILKCSMDETHPGYGKEVD R E L L K C 1 0 0 0 1 0 2 2 0 1 3 1 0 0 2 0 1 0 1 0 0 0 15 0 1659.8542 P15735 P15735 186 200 PHKG2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform yes yes 2 2.1182E-07 169.89 By MS/MS 7 0 1 1 756410 756410 0 3563 600 3697 8701 6227 6227 1 13517 0 ELCQGLGQPGSVLR ELQISNNRLEDAGVRELCQGLGQPGSVLRV RELCQGLGQPGSVLRVLWLADCDVSDSSCS R E L L R V 0 1 0 0 1 2 1 3 0 0 3 0 0 0 1 1 0 0 0 1 0 0 14 0 1512.7719 P13489 P13489 360 373 RNH1 Ribonuclease inhibitor yes yes 2 4.7256E-08 218.94 By MS/MS 8.5 1.12 1 1 1 1 4 18846000 18846000 0 3564 574 3698 8702;8703;8704;8705 6228;6229 6228 2 542640 0 ELCSLASDLSQPDLVYK ALGKTPDGQGLSTYKELCSLASDLSQPDLV CSLASDLSQPDLVYKFMNLANHHAMWNSRK K E L Y K F 1 0 0 2 1 1 1 0 0 0 4 1 0 0 1 3 0 0 1 1 0 0 17 0 1936.9452 Q5VYK3 Q5VYK3 1068 1084 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 6.3793E-07 187.74 By MS/MS 3 0.816 1 1 1 3 1450400 1450400 0 3565 1657 3699 8706;8707;8708 6230 6230 1 40114 0 ELDAEGLEAVQQTVGSR HRGRNVLTAILLLLRELDAEGLEAVQQTVG DAEGLEAVQQTVGSRLQALRGEEVQEHAE_ R E L S R L 2 1 0 1 0 2 3 2 0 0 2 0 0 0 0 1 1 0 0 2 0 0 17 0 1800.8854 O43822 O43822 226 242 C21orf2 Protein C21orf2 yes yes 2 1.0829E-82 312.92 By MS/MS 8 0 1 1 458280 458280 0 3566 227 3700 8709 6231 6231 1 30233 0 ELDALDANDELTPLGR PPPLDAVIEAEHTLRELDALDANDELTPLG LDALDANDELTPLGRILAKLPIEPRFGKMM R E L G R I 2 1 1 3 0 0 2 1 0 0 4 0 0 0 1 0 1 0 0 0 0 0 16 0 1740.853 Q08211 Q08211 838 853 DHX9 ATP-dependent RNA helicase A yes yes 2 6.8224E-29 289.37 By MS/MS 3 1.41 1 1 1 1 1 5 8257700 8257700 0 3567 1287 3701 8710;8711;8712;8713;8714 6232;6233;6234;6235;6236;6237;6238 6232 7 235560 0 ELDDATEANEGLSR EEATRANASRRKLQRELDDATEANEGLSRE RELDDATEANEGLSREVSTLKNRLRRGGPI R E L S R E 2 1 1 2 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1518.6798 P35580 P35580 1906 1919 MYH10 Myosin-10 yes yes 2 3.8819E-59 295.34 By MS/MS By matching 2 0 2 1 1 694860 665320 29540 3568 794 3702 8715;8716 6239 6239 1 33070 24870 ELDFWQEGWR LLSVYLDATFFPCLRELDFWQEGWRLEHEN FPCLRELDFWQEGWRLEHENPSDPQTPLVF R E L W R L 0 1 0 1 0 1 2 1 0 0 1 0 0 1 0 0 0 2 0 0 0 0 10 0 1364.6149 Q5JRX3 Q5JRX3 174 183 PITRM1 Presequence protease, mitochondrial yes yes 2 0.0006056 140.83 By MS/MS 4 0 1 1 110630 110630 0 3569 1606 3703 8717 6240 6240 1 3020.2 0 ELDIMEPK MSNVQLNSNFLALARELDIMEPKVPDDIYK NFLALARELDIMEPKVPDDIYKTHLENNRF R E L P K V 0 0 0 1 0 0 2 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 8 0 973.47903 Q13200 Q13200 336 343 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.0069891 129.68 By MS/MS 4.5 0.5 1 1 2 2222300 2222300 0 3570 1347 3704 8718;8719 6241 6241 1 64336 0 ELDMEPYTVAGVAK RECAIKFNDYFEFPRELDMEPYTVAGVAKL RELDMEPYTVAGVAKLEGDNVNPESQLIQQ R E L A K L 2 0 0 1 0 0 2 1 0 0 1 1 1 0 1 0 1 0 1 2 0 0 14 0 1521.7385 Q93008 Q93008 1821 1834 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 5.8951E-08 183.99 By MS/MS 1.67 0.471 1 2 3 1168900 1168900 0 3571 2096 3705;3706 8720;8721;8722 6242;6243;6244 6243 1369 3 58045 0 ELDPILTEVTLMNAR NNLMRNSTTEKIEPRELDPILTEVTLMNAR ELDPILTEVTLMNARSELYLRFLKKRISSD R E L A R S 1 1 1 1 0 0 2 0 0 1 3 0 1 0 1 0 2 0 0 1 0 0 15 0 1713.8971 Q9H9E3 Q9H9E3 351 365 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 5.2034E-11 244.71 By MS/MS 5 0 2 2 424640 424640 0 3572 2534 3707;3708 8723;8724 6245;6246 6246 1531 2 17455 0 ELDQWIEQLNECK ______________________________ TKELDQWIEQLNECKQLSESQVKSLCEKAK K E L C K Q 0 0 1 1 1 2 3 0 0 1 2 1 0 0 0 0 0 1 0 0 0 0 13 0 1703.7825 P67775 P67775 9 21 PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes yes 2 1.4518E-11 197.3 By MS/MS 8 0 1 1 211030 211030 0 3573 1181 3709 8725 6247 6247 1 13922 0 ELDRNELFEK FNLETEWKNNYPRLRELDRNELFEKAKNEI YPRLRELDRNELFEKAKNEILDEVISLSQV R E L E K A 0 1 1 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 10 1 1291.6408 O60313 O60313 587 596 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0056131 133.99 By MS/MS 4 0 1 1 680620 680620 0 3574 244 3710 8726 6248 6248 1 18580 0 ELDSIEAELTR PNPSLAQVKIEEAKRELDSIEAELTRRVDM EAKRELDSIEAELTRRVDMMEL________ R E L T R R 1 1 0 1 0 0 3 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1274.6354 Q96CS2 Q96CS2 261 271 HAUS1 HAUS augmin-like complex subunit 1 yes yes 2 3.1565E-05 202.2 By MS/MS 8 0 1 1 1465800 1465800 0 3575 2139 3711 8727 6249 6249 1 96700 0 ELDSITPEVLPGWK QYHELVVQARDDFKRELDSITPEVLPGWKG RELDSITPEVLPGWKGMSVSDLADKLSTDD R E L W K G 0 0 0 1 0 0 2 1 0 1 2 1 0 0 2 1 1 1 0 1 0 0 14 0 1582.8243 Q16891 Q16891 372 385 IMMT MICOS complex subunit MIC60 yes yes 2 2.2302E-05 158.08 By MS/MS 4.5 0.5 1 1 2 1023700 1023700 0 3576 1554 3712 8728;8729 6250;6251 6251 2 38020 0 ELDTIEVFPTK KLHLTERADFQYSQRELDTIEVFPTKSARG YSQRELDTIEVFPTKSARGNRVSCMYVRCV R E L T K S 0 0 0 1 0 0 2 0 0 1 1 1 0 1 1 0 2 0 0 1 0 0 11 0 1290.6707 Q96GS6 Q96GS6 82 92 ABHD17A Alpha/beta hydrolase domain-containing protein 17A yes yes 2 0.00067673 137.98 By MS/MS 5.44 2.71 1 1 1 1 1 1 2 1 9 9738900 9738900 0 3577 2185 3713 8730;8731;8732;8733;8734;8735;8736;8737;8738 6252;6253;6254;6255;6256 6255 5 227150 0 ELDTVTLEDIKEHVK ADGKTAAAAAEHSQRELDTVTLEDIKEHVK ELDTVTLEDIKEHVKQLEKAVSGKEPRFVL R E L V K Q 0 0 0 2 0 0 3 0 1 1 2 2 0 0 0 0 2 0 0 2 0 0 15 1 1767.9254 O43242 O43242 66 80 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.02388 65.495 By MS/MS 6 0 1 1 8216100 8216100 0 3578 187 3714 8739 6257 6257 1 64070 0 ELEAASAPEER EKDKADDDVFEKKQKELEAASAPEERTRLH KKQKELEAASAPEERTRLHDELEEAKDKAR K E L E R T 3 1 0 0 0 0 4 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1200.5622 O43432 O43432 861 871 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00030662 150.61 By MS/MS 2 0 1 1 1811800 1811800 0 3579 200 3715 8740 6258 6258 1 90054 0 ELEAFSILQK WFCGNVNEQNVLSERELEAFSILQKSGKPI VLSERELEAFSILQKSGKPILEGAALDEAL R E L Q K S 1 0 0 0 0 1 2 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1176.639 Q68CZ6 Q68CZ6 57 66 HAUS3 HAUS augmin-like complex subunit 3 yes yes 2 9.2236E-05 166.52 By MS/MS 5 0 1 1 302900 302900 0 3580 1672 3716 8741 6259 6259 1 12451 0 ELEANVLATAPDK QRLIEQEEYLNVQVKELEANVLATAPDKKK VKELEANVLATAPDKKKQKLLEENVSAFKT K E L D K K 3 0 1 1 0 0 2 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1369.7089 Q9NTJ3 Q9NTJ3 841 853 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 3.2687E-25 270.67 By MS/MS 4 0.816 1 1 1 3 2854100 2854100 0 3581 2630 3717 8742;8743;8744 6260 6260 1 80361 0 ELEASEELDTICPK LYVSGELIGGLDIIKELEASEELDTICPKA KELEASEELDTICPKAPKLEERLKVLTNKA K E L P K A 1 0 0 1 1 0 4 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 14 0 1632.7553 O76003 O76003 218 231 GLRX3 Glutaredoxin-3 yes yes 2 5.2179E-12 240.85 By MS/MS 7 0 1 1 2205200 2205200 0 3582 342 3718 8745 6261 6261 1 39408 0 ELEDATETADAMNR EEAQRANASRRKLQRELEDATETADAMNRE RELEDATETADAMNREVSSLKNKLRRGDLP R E L N R E 3 1 1 2 0 0 3 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 14 0 1564.6675 P35579 P35579 1899 1912 MYH9 Myosin-9 yes yes 2 5.0932E-59 291.24 By MS/MS 2 0 1 1 351300 351300 0 3583 793 3719 8746 6262 6262 1 17461 0 ELEEIVQPIISK SHQDADIEDFKAKKKELEEIVQPIISKLYG KKKELEEIVQPIISKLYGSAGPPPTGEEDT K E L S K L 0 0 0 0 0 1 3 0 0 3 1 1 0 0 1 1 0 0 0 1 0 0 12 0 1396.7813 P11021 P11021 622 633 HSPA5 78 kDa glucose-regulated protein yes yes 2 1.9248E-16 218.11 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 25838000 25838000 0 3584 545 3720 8747;8748;8749;8750;8751;8752 6263;6264 6263 2 1026300 0 ELEEQVVSVVNK SLDQEYDSESSQQWRELEEQVVSVVNKGVI QWRELEEQVVSVVNKGVIPSNFHPTQYCLN R E L N K G 0 0 1 0 0 1 3 0 0 0 1 1 0 0 0 1 0 0 0 4 0 0 12 0 1371.7246 Q9Y2L5 Q9Y2L5 712 723 TRAPPC8 Trafficking protein particle complex subunit 8 yes yes 2 2.8886E-17 230.95 By MS/MS 1 0 1 1 259500 259500 0 3585 2893 3721 8753 6265 6265 1 12679 0 ELEFYLR PGQCGRADGYVLEGKELEFYLRKIKARKGK DGYVLEGKELEFYLRKIKARKGK_______ K E L L R K 0 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 7 0 968.49673 P62241 P62241 194 200 RPS8 40S ribosomal protein S8 yes yes 2 0.019116 128.82 By MS/MS 8.5 1.12 1 1 1 1 4 8397800 8397800 0 3586 1118 3722 8754;8755;8756;8757 6266;6267 6267 2 1304300 0 ELEFYLRK PGQCGRADGYVLEGKELEFYLRKIKARKGK GYVLEGKELEFYLRKIKARKGK________ K E L R K I 0 1 0 0 0 0 2 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 8 1 1096.5917 P62241 P62241 194 201 RPS8 40S ribosomal protein S8 yes yes 2 0.02821 128.57 By MS/MS 8.5 0.5 1 1 2 2235000 2235000 0 3587 1118 3723 8758;8759 6268 6268 1 270240 0 ELEIEERER RVKKLEEVERKKRQRELEIEERERRREEER RKKRQRELEIEERERRREEERRLGDSSLSR R E L E R R 0 2 0 0 0 0 5 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1201.5939 Q14152 Q14152 862 870 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0021624 158.07 By MS/MS 2.5 0.5 1 1 2 2268700 2268700 0 3588 1409 3724 8760;8761 6269 6269 1 61190 0 ELEIGQAGSQR QKLRACHTRGLDGIKELEIGQAGSQRAPSA DGIKELEIGQAGSQRAPSAKKPSTGSRYQP K E L Q R A 1 1 0 0 0 2 2 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 11 0 1186.5942 Q15021 Q15021 1302 1312 NCAPD2 Condensin complex subunit 1 yes yes 2 2.8505E-07 190.57 By MS/MS 3 0 1 1 1179100 1179100 0 3589 1464 3725 8762 6270 6270 1 30779 0 ELEKVCNPIITK KNQTAEKEEFEHQQKELEKVCNPIITKLYQ QQKELEKVCNPIITKLYQSAGGMPGGMPGG K E L T K L 0 0 1 0 1 0 2 0 0 2 1 2 0 0 1 0 1 0 0 1 0 0 12 1 1442.7803 P11142 P11142 598 609 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 1.329E-06 190.26 By MS/MS 5 0 1 1 3524100 3524100 0 3590 546 3726 8763 6271 6271 1 144860 0 ELELDELALR EHKIQTNRYTVKVQRELELDELALRALKED VKVQRELELDELALRALKEDRKRFLCKAVE R E L L R A 1 1 0 1 0 0 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1199.6398 Q13315 Q13315 2444 2453 ATM Serine-protein kinase ATM yes yes 2 0.0069723 132.76 By MS/MS 3 0 1 1 0 0 0 3591 1354 3727 8764 6272 6272 1 0 0 ELELKVPLVVR VNCAIIANGITKACRELELKVPLVVRLEGT KACRELELKVPLVVRLEGTNVQEAQKILNN R E L V R L 0 1 0 0 0 0 2 0 0 0 3 1 0 0 1 0 0 0 0 3 0 0 11 1 1293.802 Q96I99 Q96I99 382 392 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 3 0.049474 67.334 By MS/MS 7 0 1 1 399270 399270 0 3592 2200 3728 8765 6273 6273 1 7135.1 0 ELELQILTEAIR FKNLSAQCQEVRKRKELELQILTEAIRNWE KRKELELQILTEAIRNWEGDDIKTLGNVTY K E L I R N 1 1 0 0 0 1 3 0 0 2 3 0 0 0 0 0 1 0 0 0 0 0 12 0 1426.8031 Q14155 Q14155 456 467 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 2 0.022542 83.045 By MS/MS 5 0 1 1 36407 36407 0 3593 1410 3729 8766 6274 6274 1 1496.5 0 ELEPGDGPIAVIVCPTR AAFIWPMLIHIMDQKELEPGDGPIAVIVCP EPGDGPIAVIVCPTRELCQQIHAECKRFGK K E L T R E 1 1 0 1 1 0 2 2 0 2 1 0 0 0 3 0 1 0 0 2 0 0 17 0 1821.9295 Q86XP3 Q86XP3 320 336 DDX42 ATP-dependent RNA helicase DDX42 yes yes 2 0.012809 84.892 By MS/MS 4 0 1 1 307180 307180 0 3594 1842 3730 8767 6275 6275 1 8385.7 0 ELEPITTSQALQIAGR FYSLIKPSINEKGERELEPITTSQALQIAG LEPITTSQALQIAGRAGRFSSRFKEGEVTT R E L G R A 2 1 0 0 0 2 2 1 0 2 2 0 0 0 1 1 2 0 0 0 0 0 16 0 1725.9261 Q8IYB8 Q8IYB8 455 470 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 9.2967E-29 237.53 By MS/MS 6 0.816 1 1 1 3 5018000 5018000 0 3595 1879 3731 8768;8769;8770 6276 6276 1 170520 0 ELEQIFCQFDSK PHRGRLNVLANVIRKELEQIFCQFDSKLEA IRKELEQIFCQFDSKLEAADEGSGDVKYHL K E L S K L 0 0 0 1 1 2 2 0 0 1 1 1 0 2 0 1 0 0 0 0 0 0 12 0 1542.7024 Q02218 Q02218 325 336 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 5.0563E-56 292.33 By MS/MS 4.5 0.5 1 1 2 714050 714050 0 3596 1251 3732 8771;8772 6277 6277 1 20073 0 ELEQVCNPIISGLYQGAGGPGPGGFGAQGPK ANTLAEKDEFEHKRKELEQVCNPIISGLYQ AGGPGPGGFGAQGPKGGSGSGPTIEEVD__ K E L P K G 2 0 1 0 1 3 2 9 0 2 2 1 0 1 4 1 0 0 1 1 0 0 31 0 3054.4869 P0DMV9;P0DMV8 P0DMV9 598 628 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 7.511E-12 114.98 By MS/MS 6 0 1 1 2525800 2525800 0 3597 528 3733 8773 6278 6278 1 19696 0 ELESQISELQEDLESER EEEAAQKNMALKKIRELESQISELQEDLES ESQISELQEDLESERASRNKAEKQKRDLGE R E L E R A 0 1 0 1 0 2 6 0 0 1 3 0 0 0 0 3 0 0 0 0 0 0 17 0 2032.9437 P35579 P35579 1108 1124 MYH9 Myosin-9 yes yes 2 0.019213 79.614 By MS/MS 2 0 1 1 52023 52023 0 3598 793 3734 8774 6279 6279 1 2585.8 0 ELEVQHPAAK LEKLFVTNDAATILRELEVQHPAAKMIVMA ATILRELEVQHPAAKMIVMASHMQEQEVGD R E L A K M 2 0 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1120.5877 P50990 P50990 75 84 CCT8 T-complex protein 1 subunit theta yes yes 2 3.922E-07 190.62 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 58013000 58013000 0 3599 955 3735 8775;8776;8777;8778;8779;8780;8781;8782;8783;8784 6280;6281;6282;6283;6284;6285;6286;6287 6283 8 834800 0 ELFEDLLR FVGVVLSSELPEDDRELFEDLLRQMSDLRL ELPEDDRELFEDLLRQMSDLRLQANWNRAE R E L L R Q 0 1 0 1 0 0 2 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 1033.5444 Q8N0X7 Q8N0X7 321 328 SPG20 Spartin yes yes 2 0.034062 97.602 By MS/MS 4.5 0.5 1 1 2 364930 364930 0 3600 1889 3736 8785;8786 6288 6288 1 14258 0 ELFGPELFR PPGTGKTSTILAAARELFGPELFRLRVLEL ILAAARELFGPELFRLRVLELNASDERGIQ R E L F R L 0 1 0 0 0 0 2 1 0 0 2 0 0 2 1 0 0 0 0 0 0 0 9 0 1106.576 P35249 P35249 94 102 RFC4 Replication factor C subunit 4 yes yes 2 0.0028304 120.87 By MS/MS 7.5 0.5 1 1 2 4528000 4528000 0 3601 785 3737 8787;8788 6289;6290 6289 2 110720 0 ELFPVLQK PGCSDLGPLIPQFLRELFPVLQKRLCHPCW LIPQFLRELFPVLQKRLCHPCWEVRDSALE R E L Q K R 0 0 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 8 0 972.56442 Q6PJG6 Q6PJG6 500 507 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.0034049 146.94 By MS/MS 5 0 1 1 340470 340470 0 3602 1717 3738 8789 6291 6291 1 13995 0 ELFSNLQEFAGPSGK RFTVIYNEQMASKKRELFSNLQEFAGPSGK ELFSNLQEFAGPSGKLSLLEVGCGTGANFK R E L G K L 1 0 1 0 0 1 2 2 0 0 2 1 0 2 1 2 0 0 0 0 0 0 15 0 1622.794 Q9H8H3 Q9H8H3 57 71 METTL7A Methyltransferase-like protein 7A yes yes 2 5.4902E-07 158.86 By MS/MS 8.5 0.5 1 1 2 526330 526330 0 3603 2525 3739 8790;8791 6292 6292 1 267720 0 ELGEDGLKAYTEVK CHTPFGGFKESGNGRELGEDGLKAYTEVKT RELGEDGLKAYTEVKTVTIKVPQKNS____ R E L V K T 1 0 0 1 0 0 3 2 0 0 2 2 0 0 0 0 1 0 1 1 0 0 14 1 1550.7828 P30837 P30837 493 506 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 3.8144E-06 168.82 By MS/MS 6 0 1 1 6689500 6689500 0 3604 747 3740 8792 6293 6293 1 52165 0 ELGENLDQILR FVGRLVSTLISKAGRELGENLDQILRAILS KAGRELGENLDQILRAILSKMQQAETLSVM R E L L R A 0 1 1 1 0 1 2 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1298.683 Q96P70 Q96P70 777 787 IPO9 Importin-9 yes yes 2 0.001593 125.71 By MS/MS 3.5 0.5 1 1 2 2364900 2364900 0 3605 2237 3741 8793;8794 6294 6294 1 64420 0 ELGEYGLQAYTEVK AQSPFGGYKMSGSGRELGEYGLQAYTEVKT RELGEYGLQAYTEVKTVTVKVPQKNS____ R E L V K T 1 0 0 0 0 1 3 2 0 0 2 1 0 0 0 0 1 0 2 1 0 0 14 0 1598.7828 P05091 P05091 493 506 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 5.4094E-53 282.21 By MS/MS 8.33 1.7 1 1 1 3 708280 708280 0 3606 467 3742 8795;8796;8797 6295;6296 6295 2 435620 0 ELGGIPIVANK LGNNAAFSVNQAIIRELGGIPIVANKINHS AIIRELGGIPIVANKINHSNQSIKEKALNA R E L N K I 1 0 1 0 0 0 1 2 0 2 1 1 0 0 1 0 0 0 0 1 0 0 11 0 1109.6445 Q8N2F6 Q8N2F6 136 146 ARMC10 Armadillo repeat-containing protein 10 yes yes 2 0.025114 84.743 By MS/MS 8.5 0.5 1 1 2 994920 994920 0 3607 1904 3743 8798;8799 6297 6297 1 96793 0 ELGHGALAEK YATNEIGKVTGLNRRELGHGALAEKALYPV GLNRRELGHGALAEKALYPVIPRDFPFTIR R E L E K A 2 0 0 0 0 0 2 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1023.5349 Q8TCS8 Q8TCS8 447 456 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.0060521 104.01 By MS/MS 5 0 1 1 910450 910450 0 3608 1996 3744 8800 6298;6299 6299 2 37423 0 ELGITALHIK YAAMLAAQDVAQRCKELGITALHIKLRATG AQRCKELGITALHIKLRATGGNRTKTPGPG K E L I K L 1 0 0 0 0 0 1 1 1 2 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1093.6495 P62263 P62263 87 96 RPS14 40S ribosomal protein S14 yes yes 2 0.00021405 172.94 By MS/MS 9.5 0.5 1 1 2 3386800 3386800 0 3609 1122 3745 8801;8802 6300 6300 1 3576200 0 ELGIWEPLAVK TWGVNGETGTLVDMKELGIWEPLAVKLQTY VDMKELGIWEPLAVKLQTYKTAVETAVLLL K E L V K L 1 0 0 0 0 0 2 1 0 1 2 1 0 0 1 0 0 1 0 1 0 0 11 0 1253.702 P49368 P49368 492 502 CCT3 T-complex protein 1 subunit gamma yes yes 2 8.6769E-11 204.79 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 115880000 115880000 0 3610 916 3746 8803;8804;8805;8806;8807;8808;8809;8810 6301;6302;6303;6304;6305;6306;6307;6308 6304 8 2311400 0 ELGLEKDDKDAIEEK HRKYLLQEQLKIIKKELGLEKDDKDAIEEK ELGLEKDDKDAIEEKFRERLKELVVPKHVM K E L E K F 1 0 0 3 0 0 4 1 0 1 2 3 0 0 0 0 0 0 0 0 0 0 15 2 1730.8574 P36776 P36776 406 420 LONP1 Lon protease homolog, mitochondrial yes yes 3 0.0017022 113.53 By MS/MS 5 0.816 1 1 1 3 4221400 4221400 0 3611 809 3747 8811;8812;8813 6309 6309 1 113580 0 ELGLPEELVSR PLKDFHKDEVRILGRELGLPEELVSRHPFP ILGRELGLPEELVSRHPFPGPGLAIRVICA R E L S R H 0 1 0 0 0 0 3 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 11 0 1240.6663 P49915 P49915 425 435 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0009175 126.39 By MS/MS 5 0 1 1 767610 767610 0 3612 940 3748 8814 6310 6310 1 31552 0 ELGLQAIDNQR KQDLSEAMSMGELQRELGLQAIDNQREVFL ELQRELGLQAIDNQREVFLLAASIAPAGPT R E L Q R E 1 1 1 1 0 2 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1255.6521 Q8N8L6 Q8N8L6 201 211 ARL10 ADP-ribosylation factor-like protein 10 yes yes 2 2.6884E-05 172.88 By MS/MS 8 0 1 1 1055000 1055000 0 3613 1932 3749 8815 6311 6311 1 69596 0 ELGNDAYK EEDLPENKKQALKEKELGNDAYKKKDFDTA KQALKEKELGNDAYKKKDFDTALKHYDKAK K E L Y K K 1 0 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 0 908.42396 P31948 P31948 230 237 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.023957 101.64 By MS/MS 5.5 0.5 1 1 2 3539500 3539500 0 3614 762 3750 8816;8817 6312 6312 1 66080 0 ELGQSLAQEVK TRLLAVTGEQAQQARELGQSLAQEVKAATE QQARELGQSLAQEVKAATERLSLGSRDVAE R E L V K A 1 0 0 0 0 2 2 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1200.635 Q5JTZ9 Q5JTZ9 791 801 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 8.3765E-11 219.72 By MS/MS By MS/MS 5.33 2.21 1 1 2 1 1 1 1 1 8 1 29284000 29243000 41186 3615 1611 3751 8818;8819;8820;8821;8822;8823;8824;8825;8826 6313;6314;6315;6316;6317;6318;6319 6315 7 1436400 86062 ELGSECGIEFDEEK SVLVAASSDIGDPLRELGSECGIEFDEEKT RELGSECGIEFDEEKTAVIDHHNYDISDLG R E L E K T 0 0 0 1 1 0 5 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 14 0 1640.6876 P39656 P39656 140 153 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 3.4007E-12 205.12 By MS/MS By MS/MS 7.2 1.17 2 1 1 1 4 1 6627300 6602600 24734 3616 825 3752 8827;8828;8829;8830;8831 6320;6321 6321 2 155840 75858 ELGSLPLPLSTSEQR HSTNQLAKETNELLKELGSLPLPLSTSEQR ELGSLPLPLSTSEQRQQRLQKERLMNDFSA K E L Q R Q 0 1 0 0 0 1 2 1 0 0 4 0 0 0 2 3 1 0 0 0 0 0 15 0 1625.8625 Q86Y82 Q86Y82 83 97 STX12 Syntaxin-12 yes yes 2 4.9808E-07 160.52 By MS/MS 7.67 0.471 1 2 3 1793100 1793100 0 3617 1846 3753 8832;8833;8834 6322;6323 6323 2 64363 0 ELGSSVALYSR FYVPDMKPSMFDVSRELGSSVALYSRKVLI DVSRELGSSVALYSRKVLIQTKATDILPKW R E L S R K 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 3 0 0 1 1 0 0 11 0 1180.6088 Q12931 Q12931 358 368 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.0027177 117.31 By MS/MS By matching 5.75 0.829 2 1 1 3 1 28857000 28759000 98401 3618 1316 3754 8835;8836;8837;8838 6324;6325 6325 2 1066000 291170 ELGVGIALR RWRLVDSKGFDEYMKELGVGIALRKMGAMA FDEYMKELGVGIALRKMGAMAKPDCIITCD K E L L R K 1 1 0 0 0 0 1 2 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 926.55492 Q01469 Q01469 25 33 FABP5 Fatty acid-binding protein, epidermal yes yes 2 0.030541 90.777 By MS/MS By MS/MS 5.78 2.9 1 1 2 1 2 1 1 5 4 119960000 82104000 37861000 3619 1242 3755 8839;8840;8841;8842;8843;8844;8845;8846;8847 6326;6327 6327 2 18040000 121300000 ELGVLVFENSAK FLSQVDFELLLAHARELGVLVFENSAKRLM HARELGVLVFENSAKRLMVVTPAGHSDVKR R E L A K R 1 0 1 0 0 0 2 1 0 0 2 1 0 1 0 1 0 0 0 2 0 0 12 0 1304.6976 Q92759 Q92759 427 438 GTF2H4 General transcription factor IIH subunit 4 yes yes 2 1.9744E-05 172.61 By MS/MS 7 0 1 1 263440 263440 0 3620 2077 3756 8848 6328 6328 1 4707.7 0 ELHAQAQER VRRHLGSPMSDVVSRELHAQAQERLQHYFM SDVVSRELHAQAQERLQHYFMGRALEERAQ R E L E R L 2 1 0 0 0 2 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1080.5312 Q15051 Q15051 481 489 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.0098225 105.2 By MS/MS By matching 4.5 0.5 1 1 1 1 378010 352100 25907 3621 1472 3757 8849;8850 6329 6329 1 14473 54135 ELHINLIPNKQDR RYESLTDPSKLDSGKELHINLIPNKQDRTL GKELHINLIPNKQDRTLTIVDTGIGMTKAD K E L D R T 0 1 2 1 0 1 1 0 1 2 2 1 0 0 1 0 0 0 0 0 0 0 13 1 1588.8685 P07900 P07900 75 87 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 0.00051135 140.01 By MS/MS 4 0.707 1 2 1 4 6375600 6375600 0 3622 494 3758 8851;8852;8853;8854 6330;6331 6330 2 182980 0 ELHKESK ARKQNNFSLAMKLLKELHKESKTRDDWLVS SLAMKLLKELHKESKTRDDWLVSWVQSYCR K E L S K T 0 0 0 0 0 0 2 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 7 1 869.46068 P78527 P78527 3261 3267 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.053332 166.78 By MS/MS 2 0.816 1 1 1 3 222470 222470 0 3623 1197 3759 8855;8856;8857 6332 6332 1 10655 0 ELHNTPYGTASEPSEK YGNEDQAEFLCVVSKELHNTPYGTASEPSE LHNTPYGTASEPSEKAKILQERGSRM____ K E L E K A 1 0 1 0 0 0 3 1 1 0 1 1 0 0 2 2 2 0 1 0 0 0 16 0 1758.8061 Q9NXV2 Q9NXV2 208 223 KCTD5 BTB/POZ domain-containing protein KCTD5 yes yes 3 0.017112 63.31 By MS/MS 8.5 0.5 1 1 2 1311400 1311400 0 3624 2693 3760 8858;8859 6333 6333 1 273460 0 ELHQLQNEK NQMRDLQLQCEANVRELHQLQNEKCHLLVE CEANVRELHQLQNEKCHLLVEHETQKLKEL R E L E K C 0 0 1 0 0 2 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1137.5778 Q9H2G2 Q9H2G2 1144 1152 SLK STE20-like serine/threonine-protein kinase yes yes 2 1.7849E-06 189.38 By MS/MS 2 0 1 1 276170 276170 0 3625 2476 3761 8860 6334 6334 1 13727 0 ELIDHSPK VRGDGPWYYYETIDKELIDHSPKATPDN__ YYETIDKELIDHSPKATPDN__________ K E L P K A 0 0 0 1 0 0 1 0 1 1 1 1 0 0 1 1 0 0 0 0 0 0 8 0 937.4869 O43674 O43674 177 184 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 2 0.0044287 139.31 By MS/MS 10 0 1 1 315520 315520 0 3626 211 3762 8861 6335 6335 1 335370 0 ELIDYLR TKSFGASGGYIGGKKELIDYLRTHSHSAVY GGYIGGKKELIDYLRTHSHSAVYATSLSPP K E L L R T 0 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 7 0 920.49673 O15270 O15270 393 399 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.046884 103.29 By MS/MS 7 0.816 1 1 1 3 3439200 3439200 0 3627 166 3763 8862;8863;8864 6336 6336 1 30412 0 ELIEIISGAAALD LTLTFNRTRQAVITKELIEIISGAAALD__ TKELIEIISGAAALD_______________ K E L L D - 3 0 0 1 0 0 2 1 0 3 2 0 0 0 0 1 0 0 0 0 0 0 13 0 1313.7078 P36542 P36542 286 298 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.00022325 147.75 By MS/MS By matching 8.75 0.829 2 1 1 3 1 2882700 2849500 33202 3628 805 3764 8865;8866;8867;8868 6337;6338 6337 2 1084900 283250 ELIEPVLTCFNDADSR ACSIALGKDSGLYLKELIEPVLTCFNDADS LIEPVLTCFNDADSRLRYYACEALYNIVKV K E L S R L 1 1 1 2 1 0 2 0 0 1 2 0 0 1 1 1 1 0 0 1 0 0 16 0 1877.8829 Q08AM6 Q08AM6 93 108 VAC14 Protein VAC14 homolog yes yes 2 8.6657E-15 205.8 By MS/MS 4.5 0.5 1 1 2 607720 607720 0 3629 1294 3765 8869;8870 6339 6339 1 24380 0 ELIFEETAR KFDMELDDLPKEKLKELIFEETARFQPGYR PKEKLKELIFEETARFQPGYRS________ K E L A R F 1 1 0 0 0 0 3 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1106.5608 P28482 P28482 345 353 MAPK1 Mitogen-activated protein kinase 1 yes yes 2 0.030024 91.069 By MS/MS By matching 6.5 2.22 1 1 2 1 1 3 3 1680200 1101100 579120 3630 721 3766 8871;8872;8873;8874;8875;8876 6340 6340 1 108650 1658800 ELIIGDR IKAVDSLVPIGRGQRELIIGDRQTGKTSIA VPIGRGQRELIIGDRQTGKTSIAIDTIINQ R E L D R Q 0 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 814.45487 P25705 P25705 208 214 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.045203 104.45 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 59950000 59526000 423900 3631 687 3767 8877;8878;8879;8880;8881 6341 6341 1 641250 1300100 ELIIGDRQTGK IKAVDSLVPIGRGQRELIIGDRQTGKTSIA RGQRELIIGDRQTGKTSIAIDTIINQKRFN R E L G K T 0 1 0 1 0 1 1 2 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1228.6776 P25705 P25705 208 218 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 2.7721E-07 194.94 By MS/MS By matching 6 0 2 1 1 10675000 10619000 56085 3632 687 3768 8882;8883 6342 6342 1 82809 172010 ELILFSNSDNER GQTTTYLTYNDFINKELILFSNSDNERSIP INKELILFSNSDNERSIPSMVDGLKPGQRK K E L E R S 0 1 2 1 0 0 2 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 12 0 1435.6943 P11388;Q02880 P11388 702 713 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 2 1.4113E-43 271.65 By MS/MS 3.5 0.5 1 1 2 2087300 2087300 0 3633 553;1258 3769 8884;8885 6343 6343 1 54722 0 ELIRDEGVTSLYK APPGKYPNGFRDVLRELIRDEGVTSLYKGF LRELIRDEGVTSLYKGFNAVMIRAFPANAA R E L Y K G 0 1 0 1 0 0 2 1 0 1 2 1 0 0 0 1 1 0 1 1 0 0 13 1 1521.8039 O43772 O43772 255 267 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0069734 163.9 By MS/MS 8.5 0.5 1 1 2 4492700 4492700 0 3634 222 3770 8886;8887 6344 6344 1 416380 0 ELISDNQYR LDDEEDQGIYQSKVRELISDNQYRLIVNVN YQSKVRELISDNQYRLIVNVNDLRRKNEKR R E L Y R L 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1136.5462 P25205 P25205 38 46 MCM3 DNA replication licensing factor MCM3 yes yes 2 8.0234E-06 176.6 By MS/MS 4 0.816 1 1 1 3 3245000 3245000 0 3635 683 3771 8888;8889;8890 6345 6345 1 90982 0 ELISFLSEPEILVK VDEDFPEDSSSQKVKELISFLSEPEILVKE KELISFLSEPEILVKENNMHPKHCNLLGDE K E L V K E 0 0 0 0 0 0 3 0 0 2 3 1 0 1 1 2 0 0 0 1 0 0 14 0 1615.9073 A6NDU8 A6NDU8 98 111 C5orf51 UPF0600 protein C5orf51 yes yes 2 0.00099156 123.62 By MS/MS 8 0 1 1 69896 69896 0 3636 21 3772 8891 6346;6347 6346 2 4611 0 ELISNASDALDK LIINTFYSNKEIFLRELISNASDALDKIRY FLRELISNASDALDKIRYESLTDPSKLDSG R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;P14625 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 5.6471E-18 265.77 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 83731000 83731000 0 3637 501;589 3773 8892;8893;8894;8895;8896;8897;8898;8899;8900;8901 6348;6349;6350;6351;6352;6353;6354;6355;6356;6357 6351 10 3409800 0 ELISNASDALDKIR LIINTFYSNKEIFLRELISNASDALDKIRY RELISNASDALDKIRYESLTDPSKLDSGKE R E L I R Y 2 1 1 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 14 1 1543.8206 P08238;P14625 P08238 42 55 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 6.2087E-25 243.4 By MS/MS 4.5 0.5 1 1 2 14336000 14336000 0 3638 501;589 3774 8902;8903 6358;6359 6358 2 470280 0 ELISNASDALEK IVARSLYSEKEVFIRELISNASDALEKLRH FIRELISNASDALEKLRHKLVSDGQALPEM R E L E K L 2 0 1 1 0 0 2 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1288.6511 Q12931 Q12931 115 126 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.025363 107.83 By MS/MS 4 0.816 1 1 1 3 17745000 17745000 0 3639 1316 3775 8904;8905;8906 6360 6360 0 723550 0 ELISNSSDALDK LIINTFYSNKEIFLRELISNSSDALDKIRY FLRELISNSSDALDKIRYESLTDPSKLDSG R E L D K I 1 0 1 2 0 0 1 0 0 1 2 1 0 0 0 3 0 0 0 0 0 0 12 0 1290.6303 P07900;Q14568 P07900 47 58 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 2 4.6073E-05 166.86 By MS/MS 7.17 2.11 1 1 1 1 1 1 6 31645000 31645000 0 3640 494 3776 8907;8908;8909;8910;8911;8912 6361;6362;6363 6361 3 1210200 0 ELISNSSDALDKIR LIINTFYSNKEIFLRELISNSSDALDKIRY RELISNSSDALDKIRYESLTDPSKLDSGKE R E L I R Y 1 1 1 2 0 0 1 0 0 2 2 1 0 0 0 3 0 0 0 0 0 0 14 1 1559.8155 P07900 P07900 47 60 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 7.8693E-18 230.81 By MS/MS 5 0.816 1 1 1 3 9274200 9274200 0 3641 494 3777 8913;8914;8915 6364 6364 1 258090 0 ELIVGEIFVR DKTYGSEFVYSDHAKELIVGEIFVRVYNEV SDHAKELIVGEIFVRVYNEVPTFQLEVPKA K E L V R V 0 1 0 0 0 0 2 1 0 2 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1173.6758 O75165 O75165 1685 1694 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.00024197 155.07 By MS/MS 2.5 0.5 1 1 2 94429 94429 0 3642 287 3778 8916;8917 6365 6365 1 4041.1 0 ELKEGFVEYTEQVVK EEKSTACQMLVCYAKELKEGFVEYTEQVVK ELKEGFVEYTEQVVKLMVPLLKFYFHDGVR K E L V K L 0 0 0 0 0 1 4 1 0 0 1 2 0 1 0 0 1 0 1 3 0 0 15 1 1796.9196 O00410 O00410 691 705 IPO5 Importin-5 yes yes 2;3 4.2471E-28 247.88 By MS/MS 4.33 0.471 2 1 3 2472100 2472100 0 3643 91 3779 8918;8919;8920 6366;6367 6366 2 72025 0 ELKENGELLPILR LYVKGELVGGLDIVKELKENGELLPILRGE VKELKENGELLPILRGEN____________ K E L L R G 0 1 1 0 0 0 3 1 0 1 4 1 0 0 1 0 0 0 0 0 0 0 13 1 1522.8719 O76003 O76003 320 332 GLRX3 Glutaredoxin-3 yes yes 2;3 9.1565E-11 199.8 By MS/MS 7.33 0.471 2 1 3 1506600 1506600 0 3644 342 3780 8921;8922;8923 6368;6369 6369 2 29303 0 ELKIDIIPNPQER RYESLTDPSKLDSGKELKIDIIPNPQERTL GKELKIDIIPNPQERTLTLVDTGIGMTKAD K E L E R T 0 1 1 1 0 1 2 0 0 3 1 1 0 0 2 0 0 0 0 0 0 0 13 1 1563.8621 P08238;Q58FF7 P08238 70 82 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2;3 1.3685E-05 176.18 By MS/MS 4.5 0.5 2 2 4 5119800 5119800 0 3645 501 3781 8924;8925;8926;8927 6370;6371;6372;6373 6373 4 172920 0 ELKTHYQADIER PETGLVTDAFKLKRKELKTHYQADIERMYG KRKELKTHYQADIERMYGRK__________ K E L E R M 1 1 0 1 0 1 2 0 1 1 1 1 0 0 0 0 1 0 1 0 0 0 12 1 1501.7525 O95573 O95573 704 715 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.022291 83.137 By MS/MS 5 0 1 1 2263400 2263400 0 3646 400 3782 8928 6374 6374 1 93033 0 ELKVGIPVTDENGNR VAAANCINIPLMRQRELKVGIPVTDENGNR ELKVGIPVTDENGNRLGESANAAKQAITQV R E L N R L 0 1 2 1 0 0 2 2 0 1 1 1 0 0 1 0 1 0 0 2 0 0 15 1 1639.8529 Q9H9B4 Q9H9B4 200 214 SFXN1 Sideroflexin-1 yes yes 2;3 0.000112 158.42 By MS/MS 8 0 2 2 2965500 2965500 0 3647 2533 3783 8929;8930 6375;6376 6375 2 195630 0 ELKVLDSK EGGEEKKSVQKKKVKELKVLDSKTAQNLSI VQKKKVKELKVLDSKTAQNLSIFLGSFRMP K E L S K T 0 0 0 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 8 1 930.5386 O60610 O60610 848 855 DIAPH1 Protein diaphanous homolog 1 yes yes 1 0.052694 55.676 By MS/MS 5 0 1 1 116780 116780 0 3648 255 3784 8931 6377 6377 0 4800.3 0 ELLAFQTSEK GIEETILEGHLGVTKELLAFQTSEKKFHIG LGVTKELLAFQTSEKKFHIGCEKGGANLIK K E L E K K 1 0 0 0 0 1 2 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1164.6027 Q93008;O00507 Q93008 1436 1445 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 5.301E-07 188.87 By MS/MS 1.67 0.471 1 2 3 1445200 1445200 0 3649 2096 3785 8932;8933;8934 6378;6379 6379 2 71568 0 ELLDGGANPLQR ALHYAVLADDYRTVKELLDGGANPLQRNEM TVKELLDGGANPLQRNEMGHTPLDYAREGE K E L Q R N 1 1 1 1 0 1 1 2 0 0 3 0 0 0 1 0 0 0 0 0 0 0 12 0 1281.6677 Q9H078 Q9H078 284 295 CLPB Caseinolytic peptidase B protein homolog yes yes 2 1.4147E-07 191.4 By MS/MS By MS/MS 6.6 0.8 3 1 1 4 1 27000000 26929000 70530 3650 2448 3786 8935;8936;8937;8938;8939 6380;6381;6382;6383 6382 4 259180 216310 ELLDQLQQK DIYTRKGPLENPKRRELLDQLQQKLYLIQM ENPKRRELLDQLQQKLYLIQMIPRQNLFTK R E L Q K L 0 0 0 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1113.603 Q9H5Q4 Q9H5Q4 287 295 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 2 9.185E-17 251.33 By MS/MS 7 0 1 1 6447100 6447100 0 3651 2505 3787 8940 6384;6385 6384 2 115210 0 ELLELASR IRIEGDPQGVQQAKRELLELASRMENERTK GVQQAKRELLELASRMENERTKDLIIEQRF R E L S R M 1 1 0 0 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 929.5182 Q00341 Q00341 496 503 HDLBP Vigilin yes yes 2 0.0085164 123.98 By MS/MS 3 0 1 1 3173300 3173300 0 3652 1231 3788 8941 6386 6386 1 82840 0 ELLEQQGIDIK PGPPSEPVDWNFAQKELLEQQGIDIKLEME FAQKELLEQQGIDIKLEMEKRLQDLENQYR K E L I K L 0 0 0 1 0 2 2 1 0 2 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1284.6925 O43896 O43896 630 640 KIF1C Kinesin-like protein KIF1C yes yes 2 5.9841E-22 236.92 By MS/MS 3 0 1 1 605850 605850 0 3653 232 3789 8942 6387 6387 1 15816 0 ELLESNFTLVGDDGTNK NKNSRLAQAWFNTHRELLESNFTLVGDDGT LESNFTLVGDDGTNKEATSTGKLNQENEHI R E L N K E 0 0 2 2 0 0 2 2 0 0 3 1 0 1 0 1 2 0 0 1 0 0 17 0 1850.8898 Q96A33 Q96A33 173 189 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 2.0299E-25 228.93 By MS/MS 6.5 0.5 1 1 2 5912100 5912100 0 3654 2114 3790 8943;8944 6388 6388 1 47352 0 ELLETWGSSSAIR AMDSQRRPLLLQVLKELLETWGSSSAIRHT LKELLETWGSSSAIRHTPLPQQRHVSKAVL K E L I R H 1 1 0 0 0 0 2 1 0 1 2 0 0 0 0 3 1 1 0 0 0 0 13 0 1447.7307 Q9Y4R8 Q9Y4R8 338 350 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 9.6596E-12 203.02 By MS/MS 4 0 1 1 1174400 1174400 0 3655 2958 3791 8945 6389 6389 1 32061 0 ELLFLSNANPSLLER NWLQHEKAPTEEGKKELLFLSNANPSLLER ELLFLSNANPSLLERHCAYL__________ K E L E R H 1 1 2 0 0 0 2 0 0 0 5 0 0 1 1 2 0 0 0 0 0 0 15 0 1714.9254 P51398 P51398 379 393 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 1.2593E-49 272.59 By MS/MS 7.5 0.5 1 1 2 1283100 1283100 0 3656 963 3792 8946;8947 6390 6390 1 24782 0 ELLGLQQAEER DLEGPVIDESVLSTKELLGLQQAEERLKRD LSTKELLGLQQAEERLKRDCIDRLKRRPRN K E L E R L 1 1 0 0 0 2 3 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1284.6674 Q5VYS8 Q5VYS8 213 223 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 0.00010208 161.51 By MS/MS 2.5 0.5 1 1 2 492890 492890 0 3657 1658 3793 8948;8949 6391 6391 1 18400 0 ELLGQGIDYEK MSSVKLRLLCSQVLKELLGQGIDYEKILKL QVLKELLGQGIDYEKILKLTADAKFESGDV K E L E K I 0 0 0 1 0 1 2 2 0 1 2 1 0 0 0 0 0 0 1 0 0 0 11 0 1263.6347 Q9H0A8 Q9H0A8 40 50 COMMD4 COMM domain-containing protein 4 yes yes 2 6.6179E-16 215.72 By MS/MS 9 0 1 1 1314500 1314500 0 3658 2450 3794 8950 6392 6392 1 754390 0 ELLGQGLLLR AHNALLDIQSSGRAKELLGQGLLLRSLQER SGRAKELLGQGLLLRSLQERNQEQEKVERR K E L L R S 0 1 0 0 0 1 1 2 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 1110.6761 Q99613;B5ME19 Q99613 644 653 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 1.3999E-21 243.29 By MS/MS By matching 4.75 2.11 1 1 2 1 1 1 1 7 1 21292000 21223000 68526 3659 2275 3795 8951;8952;8953;8954;8955;8956;8957;8958 6393;6394;6395;6396;6397;6398 6398 6 590630 143190 ELLIFNK IKDELKKVCSTNDLKELLIFNKQQVPSGES VCSTNDLKELLIFNKQQVPSGESAILDRVA K E L N K Q 0 0 1 0 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 875.51165 P09874 P09874 263 269 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.053606 100.27 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 3936000 3936000 0 3660 521 3796 8959;8960;8961;8962;8963;8964 6399 6399 1 107300 0 ELLIIGGVAAR NIKQFKKYIDNPKLRELLIIGGVAARDQLS PKLRELLIIGGVAARDQLSVLENGVDIVVG R E L A R D 2 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1110.6761 Q92499 Q92499 320 330 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 3.1357E-08 195.05 By MS/MS 5.5 0.5 1 1 2 1439500 1439500 0 3661 2051 3797 8965;8966 6400 6400 1 35805 0 ELLILQGGPPQSCTDVK LRDMLDQVYQPLAVRELLILQGGPPQSCTD LILQGGPPQSCTDVKTQMRCRAPAWLRRLC R E L V K T 0 0 0 1 1 2 1 2 0 1 3 1 0 0 2 1 1 0 0 1 0 0 17 0 1853.9557 Q9C0B7 Q9C0B7 274 290 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 2 1.481E-06 166.03 By MS/MS 4 0 1 1 503480 503480 0 3662 2432 3798 8967 6401 6401 1 13745 0 ELLKPNASVALHK TGSNYYVRILSTIDRELLKPNASVALHKHS DRELLKPNASVALHKHSNALVDVLPPEADS R E L H K H 2 0 1 0 0 0 1 0 1 0 3 2 0 0 1 1 0 0 0 1 0 0 13 1 1418.8245 P43686 P43686 122 134 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.0045063 89.663 By MS/MS 6 0 1 1 14548000 14548000 0 3663 867 3799 8968 6402 6402 1 113440 0 ELLLQPVTISR VERHNKPEVEVRSSKELLLQPVTISRNEKE RSSKELLLQPVTISRNEKEKVLIEGSINSV K E L S R N 0 1 0 0 0 1 1 0 0 1 3 0 0 0 1 1 1 0 0 1 0 0 11 0 1267.75 P59998 P59998 45 55 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 6.6685E-05 166.86 By MS/MS 9.5 0.5 1 1 2 1540000 1540000 0 3664 1062 3800 8969;8970 6403;6404 6404 2 1026300 0 ELLLSELLGR GRQAVLSMVRKAKYRELLLSELLGRRAPVV KAKYRELLLSELLGRRAPVVVRLGLTYHVH R E L G R R 0 1 0 0 0 0 2 1 0 0 5 0 0 0 0 1 0 0 0 0 0 0 10 0 1141.6707 P49842 P49842 320 329 STK19 Serine/threonine-protein kinase 19 yes yes 2 0.00040831 146.69 By MS/MS 8 0 1 1 33887 33887 0 3665 938 3801 8971 6405;6406 6405 2 2235.5 0 ELLLSYLK TFLHFQRKEFFAKLRELLLSYLKNSFIPTE EFFAKLRELLLSYLKNSFIPTEVSVLVRAI R E L L K N 0 0 0 0 0 0 1 0 0 0 4 1 0 0 0 1 0 0 1 0 0 0 8 0 977.57973 Q53R41 Q53R41 401 408 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.018258 109.01 By MS/MS 5 0 1 1 279760 279760 0 3666 1590 3802 8972 6407 6407 1 11499 0 ELLLTGPGLEER ESWPELELAERERRRELLLTGPGLEERVRA RRRELLLTGPGLEERVRAAGGQLPPRLFTL R E L E R V 0 1 0 0 0 0 3 2 0 0 4 0 0 0 1 0 1 0 0 0 0 0 12 0 1325.7191 Q8N1G4 Q8N1G4 23 34 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 6.6355E-11 200.71 By MS/MS 5 0 1 1 4805000 4805000 0 3667 1901 3803 8973 6408 6408 1 197500 0 ELLPVLISAMK QEHRVMLVNSMNTVKELLPVLISAMKIFVT NTVKELLPVLISAMKIFVTTKNSKNQGIEE K E L M K I 1 0 0 0 0 0 1 0 0 1 3 1 1 0 1 1 0 0 0 1 0 0 11 0 1212.7152 P18206 P18206 200 210 VCL Vinculin yes yes 2 0.003507 107.21 By MS/MS 3.5 0.5 1 1 2 329120 329120 0 3668 623 3804 8974;8975 6409 6409 415 1 8948 0 ELLQEQLEQLQR FQAERQAREKLAEKKELLQEQLEQLQREYS EKKELLQEQLEQLQREYSKLKASCQESARI K E L Q R E 0 1 0 0 0 4 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 12 0 1525.81 Q9Y6K9 Q9Y6K9 327 338 IKBKG NF-kappa-B essential modulator yes yes 2 4.8167E-24 243.91 By MS/MS 6.5 0.5 1 1 2 2864300 2864300 0 3669 3009 3805 8976;8977 6410;6411 6410 2 30608 0 ELLQESALIR RGVVDSEDIPLNLSRELLQESALIRKLRDV LNLSRELLQESALIRKLRDVLQQRLIKFFI R E L I R K 1 1 0 0 0 1 2 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1170.6608 Q12931 Q12931 403 412 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 2.3365E-21 237.44 By MS/MS 6 1 1 1 2 22694000 22694000 0 3670 1316 3806 8978;8979 6412;6413 6412 2 907300 0 ELLQESALIRK RGVVDSEDIPLNLSRELLQESALIRKLRDV NLSRELLQESALIRKLRDVLQQRLIKFFID R E L R K L 1 1 0 0 0 1 2 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 11 1 1298.7558 Q12931 Q12931 403 413 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.0076873 120.45 By MS/MS 5 0 1 1 2662900 2662900 0 3671 1316 3807 8980 6414 6414 1 109450 0 ELLSNVDEGIYQLEK EEERQDLTTALGLVKELLSNVDEGIYQLEK ELLSNVDEGIYQLEKGARLQEIYNRMDPRA K E L E K G 0 0 1 1 0 1 3 1 0 1 3 1 0 0 0 1 0 0 1 1 0 0 15 0 1748.8832 Q92974 Q92974 424 438 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 5.4302E-92 364.53 By MS/MS 4 0 1 1 814110 814110 0 3672 2094 3808 8981 6415 6415 1 22224 0 ELLTEFGYK VQDSEMVELVELEIRELLTEFGYKGEETPV VELEIRELLTEFGYKGEETPVIVGSALCAL R E L Y K G 0 0 0 0 0 0 2 1 0 0 2 1 0 1 0 0 1 0 1 0 0 0 9 0 1098.5597 P49411 P49411 201 209 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.00067597 149.4 By MS/MS 8 1.41 1 1 1 1 1 5 33156000 33156000 0 3673 918 3809 8982;8983;8984;8985;8986 6416;6417;6418 6416 3 1045600 0 ELLTLDEK WRVKFTLAKIRKAARELLTLDEKDPRRLFE KIRKAARELLTLDEKDPRRLFEGNALLRRL R E L E K D 0 0 0 1 0 0 2 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 0 959.51753 P46781 P46781 59 66 RPS9 40S ribosomal protein S9 yes yes 2 0.022264 103.83 By MS/MS 8.5 0.5 1 1 2 2741500 2741500 0 3674 887 3810 8987;8988 6419 6419 1 1333500 0 ELLVLPIYANLPSDMQAR EMLQDRCRRLGSKIRELLVLPIYANLPSDM VLPIYANLPSDMQARIFQPTPPGARKVVVA R E L A R I 2 1 1 1 0 1 1 0 0 1 4 0 1 0 2 1 0 0 1 1 0 0 18 0 2042.087 O60231 O60231 641 658 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 2 0.05384 58.21 By MS/MS 4 0 1 1 53050 53050 0 3675 237 3811 8989 6420 6420 1 1448.2 0 ELLVPLTSSMYVPGK AKDCLNVLNKSNEGKELLVPLTSSMYVPGK ELLVPLTSSMYVPGKLHDVEHVLIDVGTGY K E L G K L 0 0 0 0 0 0 1 1 0 0 3 1 1 0 2 2 1 0 1 2 0 0 15 0 1632.8797 Q99471 Q99471 61 75 PFDN5 Prefoldin subunit 5 yes yes 2 0.03334 67.214 By MS/MS 10 0 1 1 462580 462580 0 3676 2269 3812 8990 6421 6421 1428 1 491670 0 ELLVTETQEVVK TDVLEALNRLLDDNRELLVTETQEVVKAHP DNRELLVTETQEVVKAHPRFMLFATQNPPG R E L V K A 0 0 0 0 0 1 3 0 0 0 2 1 0 0 0 0 2 0 0 3 0 0 12 0 1386.7606 Q9NU22 Q9NU22 1173 1184 MDN1 Midasin yes yes 2 4.3334E-17 229.82 By MS/MS 2 0.816 1 1 1 3 702350 702350 0 3677 2635 3813 8991;8992;8993 6422 6422 1 27054 0 ELLYFLDSCEPEFK SFALVNGNNIRGMMKELLYFLDSCEPEFKA KELLYFLDSCEPEFKADCASGIFLAAEKYA K E L F K A 0 0 0 1 1 0 3 0 0 0 3 1 0 2 1 1 0 0 1 0 0 0 14 0 1788.828 O43747 O43747 384 397 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.0001198 145.55 By MS/MS 4 0 1 1 84617 84617 0 3678 219 3814 8994 6423 6423 1 2309.9 0 ELLYGGTSPTAETILK APNPAKATVTAMIARELLYGGTSPTAETIL LLYGGTSPTAETILKNNISSGHVPHGPLTR R E L L K N 1 0 0 0 0 0 2 2 0 1 3 1 0 0 1 1 3 0 1 0 0 0 16 0 1691.8982 O95793 O95793 458 473 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2 1.5972E-14 198.55 By MS/MS 6 0 1 1 4008700 4008700 0 3679 406 3815 8995 6424 6424 1 31260 0 ELMMFYIDLK EYQELLPIFMQLGSRELMMFYIDLKQTNDV QLGSRELMMFYIDLKQTNDVLLTFEALKHL R E L L K Q 0 0 0 1 0 0 1 0 0 1 2 1 2 1 0 0 0 0 1 0 0 0 10 0 1301.64 Q9Y4B6 Q9Y4B6 354 363 VPRBP Protein VPRBP yes yes 2 0.047114 54.157 By MS/MS 9 0 1 1 0 0 0 3680 2950 3816 8996 6425 6425 1 0 0 ELNITAAK LLELEMNSDLKAQLRELNITAAKEIEVGGG DLKAQLRELNITAAKEIEVGGGRKAIIIFV R E L A K E 2 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 858.48108 P62081 P62081 42 49 RPS7 40S ribosomal protein S7 yes yes 2 0.021256 105.14 By MS/MS By matching 9 0 2 1 1 7385200 7273400 111820 3681 1113 3817 8997;8998 6426 6426 1 4174300 1205100 ELNITAAKEIEVGGGR LLELEMNSDLKAQLRELNITAAKEIEVGGG LNITAAKEIEVGGGRKAIIIFVPVPQLKSF R E L G R K 2 1 1 0 0 0 3 3 0 2 1 1 0 0 0 0 1 0 0 1 0 0 16 1 1655.8842 P62081 P62081 42 57 RPS7 40S ribosomal protein S7 yes yes 3 0.0055261 88.78 By MS/MS 9 0 1 1 454800 454800 0 3682 1113 3818 8999 6427 6427 1 261010 0 ELNLSFCEIK VAIADAIRGGLPKLKELNLSFCEIKRDAAL LPKLKELNLSFCEIKRDAALAVAEAMADKA K E L I K R 0 0 1 0 1 0 2 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1251.6169 P46060 P46060 297 306 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0016198 154.85 By MS/MS 5 0 1 1 0 0 0 3683 876 3819 9000 6428 6428 1 0 0 ELNLSFCEIKR VAIADAIRGGLPKLKELNLSFCEIKRDAAL PKLKELNLSFCEIKRDAALAVAEAMADKAE K E L K R D 0 1 1 0 1 0 2 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 11 1 1407.718 P46060 P46060 297 307 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.00043911 159.79 By MS/MS 5 0 1 1 1050300 1050300 0 3684 876 3820 9001 6429 6429 1 43173 0 ELNVMFIETSAK DKRQVSIEEGERKAKELNVMFIETSAKAGY KAKELNVMFIETSAKAGYNVKQLFRRVAAA K E L A K A 1 0 1 0 0 0 2 0 0 1 1 1 1 1 0 1 1 0 0 1 0 0 12 0 1380.6959 P20340 P20340 147 158 RAB6A Ras-related protein Rab-6A yes yes 2 2.4154E-24 246.08 By MS/MS 9 0 2 2 642600 642600 0 3685 641 3821;3822 9002;9003 6430;6431 6430 433 2 368790 0 ELNYNLDTHTSTGR HYNINCNSTRTPVAKELNYNLDTHTSTGRI KELNYNLDTHTSTGRIKAAEKKEACNVESN K E L G R I 0 1 2 1 0 0 1 1 1 0 2 0 0 0 0 1 3 0 1 0 0 0 14 0 1619.754 Q9NSV4 Q9NSV4 1135 1148 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.053403 68.171 By MS/MS 3 0 1 1 595240 595240 0 3686 2628 3823 9004 6432 6432 1 15539 0 ELPPDQAEYCIAR LAGDKNFITAEELRRELPPDQAEYCIARMA RRELPPDQAEYCIARMAPYQGPDAVPGALD R E L A R M 2 1 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 13 0 1560.7242 P12814;O43707 O43707 870 882 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 2 0.039415 75.788 By MS/MS 4 0 1 1 984640 984640 0 3687 217;568 3824 9005 6433 6433 1 26879 0 ELPQVSFVK PQCAQMNEVMAELAKELPQVSFVKLEAEGV MAELAKELPQVSFVKLEAEGVPEVSEKYEI K E L V K L 0 0 0 0 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 9 0 1045.5808 O76003 O76003 59 67 GLRX3 Glutaredoxin-3 yes yes 2 0.0091407 106.68 By MS/MS 7.5 0.5 1 1 2 6886300 6886300 0 3688 342 3825 9006;9007 6434 6434 1 141670 0 ELPVNAQNYVR LPGWNTDISNARAFKELPVNAQNYVRFIED RAFKELPVNAQNYVRFIEDELQIPVKWIGV K E L V R F 1 1 2 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 2 0 0 11 0 1301.6728 P30520 P30520 420 430 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 7.8936E-12 213.53 By MS/MS 6.5 0.5 1 1 2 7122800 7122800 0 3689 742 3826 9008;9009 6435 6435 1 117820 0 ELQAHGADELLK DKTKVMVSISLKFYKELQAHGADELLKRVY FYKELQAHGADELLKRVYGSFLVNPESGYN K E L L K R 2 0 0 1 0 1 2 1 1 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1322.683 O15144 O15144 66 77 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 2 7.2057E-05 161.19 By MS/MS 8 0 1 1 603830 603830 0 3690 152 3827 9010 6436 6436 1 39834 0 ELQALSEQLGR GGNQAATERIILFGRELQALSEQLGREYGK LFGRELQALSEQLGREYGKNLAHTEMLQDA R E L G R E 1 1 0 0 0 2 2 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 11 0 1242.6568 Q6VN20 Q6VN20 517 527 RANBP10 Ran-binding protein 10 yes yes 2 2.8505E-07 190.57 By MS/MS 5 0 1 1 2053900 2053900 0 3691 1734 3828 9011 6437 6437 1 84425 0 ELQAMSEQLR GGSQAAIERMIHFGRELQAMSEQLRRDCGK IHFGRELQAMSEQLRRDCGKNTANKKMLKD R E L L R R 1 1 0 0 0 2 2 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 10 0 1203.5918 Q96S59 Q96S59 626 635 RANBP9 Ran-binding protein 9 yes yes 2 0.00038851 149.33 By MS/MS 4 0 1 1 441860 441860 0 3692 2254 3829 9012 6438 6438 1 12062 0 ELQCLTPR ADVIQATGDAICIFRELQCLTPRGRYDIRI DAICIFRELQCLTPRGRYDIRIYPTFLHLH R E L P R G 0 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 8 0 1015.5121 Q08945 Q08945 204 211 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.04976 96.034 By MS/MS 5 0 1 1 0 0 0 3693 1291 3830 9013 6439 6439 1 0 0 ELQELNELFKPVVAAQK QSEAEKKLKKDDKKKELQELNELFKPVVAA QELNELFKPVVAAQKISKGADPKSVVCAFF K E L Q K I 2 0 1 0 0 2 3 0 0 0 3 2 0 1 1 0 0 0 0 2 0 0 17 1 1955.0728 Q8WU90 Q8WU90 77 93 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 3 0.01144 76.311 By MS/MS 6 0 1 1 2100800 2100800 0 3694 2013 3831 9014 6440 6440 1 16382 0 ELQEQLK LCEHQFTIIVAELQKELQEQLKITTFKDLV IIVAELQKELQEQLKITTFKDLVIRDKELT K E L L K I 0 0 0 0 0 2 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 886.476 O75694 O75694 813 819 NUP155 Nuclear pore complex protein Nup155 yes yes 2 0.018801 129.68 By MS/MS 3 0 1 1 395200 395200 0 3695 324 3832 9015 6441 6441 1 10317 0 ELQEQMSR VRNQQTIGARKELQKELQEQMSRGDPFKDI ARKELQKELQEQMSRGDPFKDIILYVKEEM K E L S R G 0 1 0 0 0 2 2 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 8 0 1019.4706 Q7L1Q6 Q7L1Q6 260 267 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.017402 110.12 By MS/MS 7 0 1 1 724310 724310 0 3696 1762 3833 9016 6442 6442 1 12944 0 ELQGFIAR SSSGKPDVPCSLYMKELQGFIARVMSDYFK PCSLYMKELQGFIARVMSDYFKHFECLDFV K E L A R V 1 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 932.50797 Q9UP83 Q9UP83 646 653 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.0033279 147.52 By MS/MS 4.5 0.5 1 1 2 879630 879630 0 3697 2850 3834 9017;9018 6443 6443 1 25206 0 ELQGFLDGVK DACIRERFVDSKRARELQGFLDGVKKGQEQ SKRARELQGFLDGVKKGQEQVLGDLSMILC R E L V K K 0 0 0 1 0 1 1 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 10 0 1104.5815 Q8WX92 Q8WX92 282 291 NELFB Negative elongation factor B yes yes 2 0.00031165 152.34 By MS/MS 5 0 1 1 416950 416950 0 3698 2044 3835 9019 6444 6444 1 17139 0 ELQHAALGGTATR EELNRKAEELDRRERELQHAALGGTATRQN ERELQHAALGGTATRQNNWPPLPSFCPVQP R E L T R Q 3 1 0 0 0 1 1 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 13 0 1323.6895 O14828 O14828 119 131 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 4.2406E-05 161.25 By MS/MS By matching 8.17 0.687 1 3 2 5 1 4028200 4012600 15559 3699 130 3836 9020;9021;9022;9023;9024;9025 6445;6446 6446 2 370350 132740 ELQLPSMSMLTSK NVVIVASQKRPLGGRELQLPSMSMLTSKTS GRELQLPSMSMLTSKTSTQKFFLRVLQVII R E L S K T 0 0 0 0 0 1 1 0 0 0 3 1 2 0 1 3 1 0 0 0 0 0 13 0 1463.7364 Q7Z6Z7 Q7Z6Z7 3704 3716 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.016588 65.5 By MS/MS 1 0 1 1 164270 164270 0 3700 1803 3837 9026 6447 6447 1261;1262 1 8026 0 ELQLQEVALR DENSQLVAIVLRRLRELQLQEVALRQENKR LRRLRELQLQEVALRQENKRPSPRKLSSEP R E L L R Q 1 1 0 0 0 2 2 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 10 0 1197.6717 Q9Y4B6 Q9Y4B6 181 190 VPRBP Protein VPRBP yes yes 2 1.4799E-10 223.32 By MS/MS 3 0 1 1 443540 443540 0 3701 2950 3838 9027 6448 6448 1 11579 0 ELQNAPDAIPESGVEPPALDTAWVEATR EIHRKLSEATRSSLRELQNAPDAIPESGVE VEPPALDTAWVEATRKKALLKLEKLDTDLK R E L T R K 5 1 1 2 0 1 4 1 0 1 2 0 0 0 4 1 2 1 0 2 0 0 28 0 2975.4512 Q13098 Q13098 108 135 GPS1 COP9 signalosome complex subunit 1 yes yes 3 0.00031179 66.633 By MS/MS 6 0 1 1 2538500 2538500 0 3702 1333 3839 9028 6449;6450 6450 2 19795 0 ELQPQQQPR EKPSTLQRPQETVIRELQPQQQPRTIERRD QETVIRELQPQQQPRTIERRDLQYITVSKE R E L P R T 0 1 0 0 0 4 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 1122.5782 P55196 P55196 1480 1488 MLLT4 Afadin yes yes 2 0.00053217 152.63 By MS/MS 3 0.816 1 1 1 3 538450 538450 0 3703 1029 3840 9029;9030;9031 6451 6451 1 22565 0 ELQPSEEVTWK ERLTAFRNKSMLFKRELQPSEEVTWK____ LFKRELQPSEEVTWK_______________ R E L W K - 0 0 0 0 0 1 3 0 0 0 1 1 0 0 1 1 1 1 0 1 0 0 11 0 1344.6561 O75438 O75438 48 58 NDUFB1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 yes yes 2 0.00071536 137.46 By MS/MS By matching 10 0 2 1 1 1761200 1741000 20281 3704 310 3841 9032;9033 6452 6452 1 1850500 520190 ELQSLLVEER VVDSADRQRMQDCQRELQSLLVEERLAGAT QDCQRELQSLLVEERLAGATLLIFANKQDL R E L E R L 0 1 0 0 0 1 3 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1214.6507 P36404 P36404 105 114 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 7.4731E-11 208.63 By MS/MS 9 0.816 1 1 1 3 4721900 4721900 0 3705 802 3842 9034;9035;9036 6453;6454 6454 2 2986800 0 ELQSMADQEK SLLINAVEASCIRTRELQSMADQEKISPAA CIRTRELQSMADQEKISPAALKKTLLDRVK R E L E K I 1 0 0 1 0 2 2 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 10 0 1177.5285 Q96C36 Q96C36 267 276 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 1.8209E-16 230.24 By MS/MS By MS/MS 8 0 4 2 2 17441000 17389000 52360 3706 2136 3843;3844 9037;9038;9039;9040 6455;6456;6457 6456 1386 3 1147100 446690 ELQSMADQEKISPAALKK SLLINAVEASCIRTRELQSMADQEKISPAA SMADQEKISPAALKKTLLDRVKLESPTVST R E L K K T 3 0 0 1 0 2 2 0 0 1 2 3 1 0 1 2 0 0 0 0 0 0 18 2 1986.0456 Q96C36 Q96C36 267 284 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 3 0.013427 79.347 By MS/MS 8 0 1 1 2234900 2234900 0 3707 2136 3845 9041 6458 6458 1386 1 147440 0 ELQSMADQEQVSPAAIK SLLINAVEASCIRTRELQSMADQEQVSPAA QSMADQEQVSPAAIKKTILDKVKLDSPAGT R E L I K K 3 0 0 1 0 3 2 0 0 1 1 1 1 0 1 2 0 0 0 1 0 0 17 0 1843.8986 P32322 P32322 267 283 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 3.528E-43 253.16 By MS/MS 7.5 0.5 1 1 2 3828300 3828300 0 3708 764 3846 9042;9043 6459 6459 1 244860 0 ELQSMADQEQVSPAAIKK SLLINAVEASCIRTRELQSMADQEQVSPAA SMADQEQVSPAAIKKTILDKVKLDSPAGTA R E L K K T 3 0 0 1 0 3 2 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 18 1 1971.9935 P32322 P32322 267 284 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 2.5639E-25 230.69 By MS/MS 8 0 2 2 1277700 1277700 0 3709 764 3847;3848 9044;9045 6460;6461 6461 516 2 84290 0 ELQSQIQEAR GYRVATFHDCEDAARELQSQIQEARADLAR EDAARELQSQIQEARADLARRGLRF_____ R E L A R A 1 1 0 0 0 3 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1200.6099 Q9P2X0 Q9P2X0 73 82 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 yes yes 2 3.0396E-17 232.88 By MS/MS 10 0 2 2 6992700 6992700 0 3710 2743 3849 9046;9047 6462;6463 6462 2 7432500 0 ELQVGIPVADEAGQR VAAANCINIPLMRQRELQVGIPVADEAGQR ELQVGIPVADEAGQRLGYSVTAAKQGIFQV R E L Q R L 2 1 0 1 0 2 2 2 0 1 1 0 0 0 1 0 0 0 0 2 0 0 15 0 1580.8158 Q9BWM7 Q9BWM7 199 213 SFXN3 Sideroflexin-3 yes yes 2 4.8116E-07 164.53 By MS/MS 8 0 1 1 1349700 1349700 0 3711 2397 3850 9048 6464 6464 1 89039 0 ELQVLDGANIQSIMASEK YAISNAEAFAEKLSRELQVLDGANIQSIMA VLDGANIQSIMASEKQVNILMKLLDEALKE R E L E K Q 2 0 1 1 0 2 2 1 0 2 2 1 1 0 0 2 0 0 0 1 0 0 18 0 1944.9826 Q9NV70 Q9NV70 195 212 EXOC1 Exocyst complex component 1 yes yes 2 4.1413E-11 172.09 By MS/MS 4 0 1 1 202000 202000 0 3712 2645 3851 9049 6465 6465 1 5514.3 0 ELRDEEQTAESIK LACCVAPTNPRFGGKELRDEEQTAESIKNQ GKELRDEEQTAESIKNQMTVKEWEKVFEMS K E L I K N 1 1 0 1 0 1 4 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 13 1 1546.7475 Q14566 Q14566 314 326 MCM6 DNA replication licensing factor MCM6 yes yes 2;3 5.298E-05 174.23 By MS/MS 4 0 2 2 1141100 1141100 0 3713 1436 3852 9050;9051 6466;6467 6466 2 31150 0 ELREQLKELTK RKKLLEHKEIDGRLKELREQLKELTKQYEK GRLKELREQLKELTKQYEKSENDLKALQSV K E L T K Q 0 1 0 0 0 1 3 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 11 2 1385.7878 P62333 P62333 28 38 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.00098528 121.02 By MS/MS 7 0 1 1 2748500 2748500 0 3714 1133 3853 9052 6468 6468 1 49117 0 ELSAEELYK IESDSPCSSEALSKKELSAEELYKRLEKLI EALSKKELSAEELYKRLEKLIIEDKANDEQ K E L Y K R 1 0 0 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1080.5339 O43432 O43432 1420 1428 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.042916 84.568 By MS/MS 2 0 1 1 356280 356280 0 3715 200 3854 9053 6469 6469 1 17709 0 ELSANTAAFAK RKLHVSVEALVCHRKELSANTAAFAKSAAM CHRKELSANTAAFAKSAAMLGNSEDHTALS K E L A K S 4 0 1 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1121.5717 O60749 O60749 336 346 SNX2 Sorting nexin-2 yes yes 2 0.012255 96.331 By MS/MS 5 0 1 1 1261000 1261000 0 3716 262 3855 9054 6470 6470 1 51831 0 ELSAQPEVHR ERADQRFVWNGHLLRELSAQPEVHRFALPV GHLLRELSAQPEVHRFALPVLHGFITMHSC R E L H R F 1 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1164.5887 Q9NTJ5 Q9NTJ5 175 184 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.000443 147.2 By MS/MS 1.5 0.5 1 1 2 608450 608450 0 3717 2631 3856 9055;9056 6471;6472 6471 2 29862 0 ELSAVTFPDIIR GGEPDFHAVEPYTKKELSAVTFPDIIRNYK TKKELSAVTFPDIIRNYKVMAAENIPENPL K E L I R N 1 1 0 1 0 0 1 0 0 2 1 0 0 1 1 1 1 0 0 1 0 0 12 0 1359.7398 P42224 P42224 638 649 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 7.3984E-05 160.77 By MS/MS 5 0.816 1 1 1 3 2853600 2853600 0 3718 847 3857 9057;9058;9059 6473 6473 1 96345 0 ELSDFISYLQR PANKKLNPKKYEGGRELSDFISYLQREATN EGGRELSDFISYLQREATNPPVIQEEKPKK R E L Q R E 0 1 0 1 0 1 1 0 0 1 2 0 0 1 0 2 0 0 1 0 0 0 11 0 1369.6878 P30101 P30101 472 482 PDIA3 Protein disulfide-isomerase A3 yes yes 2 1.9778E-16 227.99 By MS/MS 5.5 0.5 1 1 2 5863400 5863400 0 3719 736 3858 9060;9061 6474 6474 1 47375 0 ELSDIAHR ______________________________ LTPEQKKELSDIAHRIVAPGKGILAADEST K E L H R I 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 939.47739 P04075 P04075 15 22 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.017166 113.7 By MS/MS 7.5 0.5 1 1 2 1723100 1723100 0 3720 444 3859 9062;9063 6475;6476 6475 2 113670 0 ELSDLESAR SRLLDTIGISQPQWRELSDLESARQFCQTV SQPQWRELSDLESARQFCQTVGYPCVVRPS R E L A R Q 1 1 0 1 0 0 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 1018.4931 P27708 P27708 1067 1075 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.011496 101.54 By MS/MS 2 0.816 1 1 1 3 3163700 3163700 0 3721 709 3860 9064;9065;9066 6477;6478;6479 6478 3 141960 0 ELSDPAGAIIYTSR SLHDQGAGGNGNVLKELSDPAGAIIYTSRF KELSDPAGAIIYTSRFQLGDPTLNALEIWG K E L S R F 2 1 0 1 0 0 1 1 0 2 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1491.7569 O15067 O15067 528 541 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 4.2984E-14 215.08 By MS/MS 3.5 0.5 1 1 2 1372700 1372700 0 3722 145 3861 9067;9068 6480 6480 0 35988 0 ELSDSVTLSSSDR DPILVQTLWQDIIEKELSDSVTLSSSDRMH EKELSDSVTLSSSDRMHALSLKIVLLGKIY K E L D R M 0 1 0 2 0 0 1 0 0 0 2 0 0 0 0 5 1 0 0 1 0 0 13 0 1394.6525 O75694 O75694 1228 1240 NUP155 Nuclear pore complex protein Nup155 yes yes 2 0.0089261 96.756 By MS/MS 3 0 1 1 741780 741780 0 3723 324 3862 9069 6481 6481 1 19364 0 ELSEALGQIFDSQR CTNETRSTHTLDLSRELSEALGQIFDSQRG RELSEALGQIFDSQRGCDLSISVNVQGEDA R E L Q R G 1 1 0 1 0 2 2 1 0 1 2 0 0 1 0 2 0 0 0 0 0 0 14 0 1591.7842 Q08380 Q08380 138 151 LGALS3BP Galectin-3-binding protein yes yes 2 8.9568E-05 149.41 By MS/MS 5 0 1 1 170540 170540 0 3724 1289 3863 9070 6482 6482 1 7010 0 ELSEITTAEAEPVVPR EDSIEKDKEEAAISRELSEITTAEAEPVVP LSEITTAEAEPVVPRGGFDSPFYRDSLPGS R E L P R G 2 1 0 0 0 0 4 0 0 1 1 0 0 0 2 1 2 0 0 2 0 0 16 0 1739.8941 Q92574 Q92574 485 500 TSC1 Hamartin yes yes 2 1.4983E-07 166.24 By MS/MS 3.5 0.5 1 1 2 1142600 1142600 0 3725 2061 3864 9071;9072 6483 6483 1 30092 0 ELSGSGLER EAQWRERPDVGRYLRELSGSGLERLRREPE VGRYLRELSGSGLERLRREPERLAEERAQL R E L E R L 0 1 0 0 0 0 2 2 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 946.47197 Q96MW5 Q96MW5 52 60 COG8 Conserved oligomeric Golgi complex subunit 8 yes yes 2 0.024635 94.114 By MS/MS 5 0 2 2 1552000 1552000 0 3726 2228 3865 9073;9074 6484 6484 1 63795 0 ELSLAGNELGDEGAR CGDLCRVLRAKESLKELSLAGNELGDEGAR ELSLAGNELGDEGARLLCETLLEPGCQLES K E L A R L 2 1 1 1 0 0 3 3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 15 0 1529.7322 P13489 P13489 288 302 RNH1 Ribonuclease inhibitor yes yes 2 7.0895E-39 267.93 By MS/MS 8 0.816 1 1 1 3 9458600 9458600 0 3727 574 3866 9075;9076;9077 6485;6486 6485 2 269900 0 ELSNFYFSIIK DFGKVVRLLRTFYTRELSNFYFSIIKDRLY FYTRELSNFYFSIIKDRLYCEKENDPKRRS R E L I K D 0 0 1 0 0 0 1 0 0 2 1 1 0 2 0 2 0 0 1 0 0 0 11 0 1359.7075 Q9NSE4 Q9NSE4 793 803 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0086628 99.568 By MS/MS 4 0 1 1 218700 218700 0 3728 2624 3867 9078 6487 6487 1 5970.2 0 ELSPDFYQPGPDYVK LAARQECDIARAVARELSPDFYQPGPDYVK ELSPDFYQPGPDYVKQRFQEGVDAKENPEE R E L V K Q 0 0 0 2 0 1 1 1 0 0 1 1 0 1 3 1 0 0 2 1 0 0 15 0 1753.8199 Q9HDC5 Q9HDC5 411 425 JPH1 Junctophilin-1 yes yes 2 3.5088E-07 186.17 By MS/MS 5.5 0.5 1 1 2 1763900 1763900 0 3729 2569 3868 9079;9080 6488 6488 1 53020 0 ELSQNTDESGLNDEAIAK SVQRSNKKMVASKRKELSQNTDESGLNDEA QNTDESGLNDEAIAKQLQLDEDAELERQLH K E L A K Q 2 0 2 2 0 1 3 1 0 1 2 1 0 0 0 2 1 0 0 0 0 0 18 0 1932.8912 P35251 P35251 188 205 RFC1 Replication factor C subunit 1 yes yes 2 4.1095E-14 187.16 By MS/MS 3 0 1 1 1115900 1115900 0 3730 787 3869 9081 6489 6489 1 29131 0 ELSRKPDIYER AEQKLFSEKRVELLKELSRKPDIYERLASA ELLKELSRKPDIYERLASALAPSIYEHEDI K E L E R L 0 2 0 1 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 0 11 2 1404.7361 P33991 P33991 451 461 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.01041 105.2 By MS/MS 4 0 1 1 1979000 1979000 0 3731 773 3870 9082 6490 6490 1 54024 0 ELSTTLNADEAVTR RIPAVKEKISKFFGKELSTTLNADEAVTRG KELSTTLNADEAVTRGCALQCAILSPAFKV K E L T R G 2 1 1 1 0 0 2 0 0 0 2 0 0 0 0 1 3 0 0 1 0 0 14 0 1518.7526 P34932 P34932 361 374 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 1.071E-05 167.84 By MS/MS 4 0 1 1 1930000 1930000 0 3732 778 3871 9083 6491 6491 1 52687 0 ELTASHATK VLCGRNGGALEELIRELTASHATKVQTHKP LEELIRELTASHATKVQTHKPYLVTFDLTD R E L T K V 2 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 9 0 956.49271 Q6IAN0 Q6IAN0 95 103 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 3.6679E-06 182.53 By MS/MS By matching 8 0 2 1 1 2491100 2481000 10102 3733 1682 3872 9084;9085 6492 6492 1 163670 86184 ELTAVVQK TRTQNVLGEKGRRIRELTAVVQKRFGFPEG EKGRRIRELTAVVQKRFGFPEGSVELYAEK R E L Q K R 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 8 0 886.51238 P23396 P23396 68 75 RPS3 40S ribosomal protein S3 yes yes 2 0.0033045 147.69 By MS/MS 8.5 0.5 1 1 2 4509400 4509400 0 3734 668 3873 9086;9087 6493 6493 1 403820 0 ELTAVVQKR TRTQNVLGEKGRRIRELTAVVQKRFGFPEG KGRRIRELTAVVQKRFGFPEGSVELYAEKV R E L K R F 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 9 1 1042.6135 P23396 P23396 68 76 RPS3 40S ribosomal protein S3 yes yes 2 1.0986E-05 185.55 By MS/MS By matching 8.75 0.829 2 1 1 3 1 9182600 9075000 107610 3735 668 3874 9088;9089;9090;9091 6494 6494 1 733460 918050 ELTGPAVLAVELCSR RELNLAISRDSRGGRELTGPAVLAVELCSR ELTGPAVLAVELCSRESMFGYHGHGPSPFL R E L S R E 2 1 0 0 1 0 2 1 0 0 3 0 0 0 1 1 1 0 0 2 0 0 15 0 1613.8447 P28340 P28340 181 195 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.00023701 132.14 By MS/MS 3.5 0.5 1 1 2 312570 312570 0 3736 719 3875 9092;9093 6495;6496 6495 2 8258.6 0 ELTGYNADVICLQEVDR PYALELDYRQNLIQKELTGYNADVICLQEV TGYNADVICLQEVDRAVFSDSLVPALEAFG K E L D R A 1 1 1 2 1 1 2 1 0 1 2 0 0 0 0 0 1 0 1 2 0 0 17 0 1993.9415 Q6L8Q7 Q6L8Q7 338 354 PDE12 2,5-phosphodiesterase 12 yes yes 2 3.0203E-33 238.88 By MS/MS 5.5 0.5 1 1 2 2671700 2671700 0 3737 1687 3876 9094;9095 6497 6497 1 33210 0 ELTLLGKPK IMDKHLKRKAMTKKKELTLLGKPKRPRSAY AMTKKKELTLLGKPKRPRSAYNVYVAERFQ K E L P K R 0 0 0 0 0 0 1 1 0 0 3 2 0 0 1 0 1 0 0 0 0 0 9 1 997.61718 Q00059 Q00059 148 156 TFAM Transcription factor A, mitochondrial yes yes 2 0.0068572 143.73 By MS/MS 9 0 1 1 2801700 2801700 0 3738 1229 3877 9096 6498 6498 1 1607900 0 ELTLQDVELLK TADEEEPELTASLPRELTLQDVELLKVGHV SLPRELTLQDVELLKVGHVGPLQIGQAVKK R E L L K V 0 0 0 1 0 1 2 0 0 0 4 1 0 0 0 0 1 0 0 1 0 0 11 0 1299.7286 Q13049 Q13049 272 282 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 2 6.8649E-16 215.06 By MS/MS 5 0 1 1 588600 588600 0 3739 1329 3878 9097 6499 6499 1 24194 0 ELTNQQEASVER KKYRQLTAHLQDVNRELTNQQEASVERQQQ VNRELTNQQEASVERQQQPPPETFDFKIKF R E L E R Q 1 1 1 0 0 2 3 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1402.6688 Q14203 Q14203 533 544 DCTN1 Dynactin subunit 1 yes yes 2 4.6978E-56 310.77 By MS/MS 3.5 0.5 1 1 2 8127600 8127600 0 3740 1420 3879 9098;9099 6500;6501 6500 2 212820 0 ELTPQVVSAAR KSTVEGIQASVKTARELTPQVVSAARILLR KTARELTPQVVSAARILLRNPGNQAAYEHF R E L A R I 2 1 0 0 0 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 11 0 1169.6404 P18206 P18206 670 680 VCL Vinculin yes yes 2 8.7855E-05 163.66 By MS/MS 4.5 0.5 1 1 2 2075900 2075900 0 3741 623 3880 9100;9101 6502 6502 1 60459 0 ELTTEIDNNIEQISSYK QNRKDAEAWFNEKSKELTTEIDNNIEQISS TTEIDNNIEQISSYKSEITELRRNVQALEI K E L Y K S 0 0 2 1 0 1 3 0 0 3 1 1 0 0 0 2 2 0 1 0 0 0 17 0 1995.9637 CON__P13645;P13645 CON__P13645 346 362 KRT10 Keratin, type I cytoskeletal 10 yes no 2 3.3667E-43 253.97 By MS/MS By MS/MS 5 3 1 1 1 1 1 1 1 1 7 1 3291200 3153500 137650 + 3742 49 3881 9102;9103;9104;9105;9106;9107;9108;9109 6503;6504;6505;6506;6507 6506 5 282500 137650 ELTVSNNDINEAGVR CEPLASVLRAKPDFKELTVSNNDINEAGVR ELTVSNNDINEAGVRVLCQGLKDSPCQLEA K E L V R V 1 1 3 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 15 0 1629.7958 P13489 P13489 174 188 RNH1 Ribonuclease inhibitor yes yes 2 4.7362E-92 335.25 By MS/MS 7.67 0.471 1 2 3 13216000 13216000 0 3743 574 3882 9110;9111;9112 6508;6509 6508 2 269810 0 ELVASGENK DGPGETDAFGNSEGKELVASGENKIKQGLL GNSEGKELVASGENKIKQGLLPSLEDLLFY K E L N K I 1 0 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 945.47673 O94925 O94925 122 130 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 0.047116 82.241 By MS/MS By matching 6 0 2 1 1 2986900 2962800 24110 3744 359 3883 9113;9114 6510 6510 1 23104 73944 ELVEPLTPSGEAPNQALLR HIVRKRTLRRLLQERELVEPLTPSGEAPNQ PLTPSGEAPNQALLRILKETEFKKIKVLGS R E L L R I 2 1 1 0 0 1 3 1 0 0 4 0 0 0 3 1 1 0 0 1 0 0 19 0 2033.0793 P00533 P00533 687 705 EGFR Epidermal growth factor receptor yes yes 2 0.0023881 126.09 By MS/MS 3 0 1 1 436370 436370 0 3745 431 3884 9115 6511 6511 1 11391 0 ELVFKEDGQEYAQVIK KNRRRGKNENESEKRELVFKEDGQEYAQVI LVFKEDGQEYAQVIKMLGNGRLEAMCFDGV R E L I K M 1 0 0 1 0 2 3 1 0 1 1 2 0 1 0 0 0 0 1 2 0 0 16 1 1894.9676 P47813;O14602 P47813 25 40 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 3 0.025383 65.565 By MS/MS By matching 9 0 2 1 1 572910 497660 75247 3746 116 3885 9116;9117 6512 6512 1 285610 810950 ELVNVDAETFPGTQGQK ESGSVTKSKGLSMDRELVNVDAETFPGTQG VNVDAETFPGTQGQKGIQPWFGPGEETNMG R E L Q K G 1 0 1 1 0 2 2 2 0 0 1 1 0 1 1 0 2 0 0 2 0 0 17 0 1831.8952 Q96D09 Q96D09 174 190 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 1.8075E-25 280.97 By MS/MS 4 0 1 1 837410 837410 0 3747 2146 3886 9118 6513 6513 1 22860 0 ELVSCSNCTDYQAR KLDLEAWFPGSGAFRELVSCSNCTDYQARR RELVSCSNCTDYQARRLRIRYGQTKKMMDK R E L A R R 1 1 1 1 2 1 1 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 14 0 1701.7087 P49591 P49591 391 404 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 4.843E-09 153.74 By MS/MS 6 0 1 1 1299000 1299000 0 3748 922 3887 9119 6514 6514 0 10130 0 ELVSDANQHVK CRENVIMSQILPCIKELVSDANQHVKSALA PCIKELVSDANQHVKSALASVIMGLSPILG K E L V K S 1 0 1 1 0 1 1 0 1 0 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1238.6255 P30153 P30153 332 342 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 0.038917 96.668 By MS/MS 6 0 1 1 1654800 1654800 0 3749 737 3888 9120 6515 6515 1 12904 0 ELVSGGR ARTQRPADVIFATVRELVSGGRSVRFSEAE DVIFATVRELVSGGRSVRFSEAEQRCVSRG R E L G R S 0 1 0 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 7 0 716.3817 P33993 P33993 667 673 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.042356 106.42 By MS/MS By matching 4.5 0.5 1 1 1 1 2217100 2184300 32761 3750 775 3889 9121;9122 6516 6516 1 89784 68457 ELVTIIPNFSLDK ______________________________ EKELVTIIPNFSLDKIYLIGGDLGPFNPGL K E L D K I 0 0 1 1 0 0 1 0 0 2 2 1 0 1 1 1 1 0 0 1 0 0 13 0 1487.8235 Q9Y248 Q9Y248 13 25 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 0.025299 80.688 By MS/MS 9 0 1 1 96904 96904 0 3751 2867 3890 9123 6517 6517 1 55614 0 ELVVTQLGYDTR AIDTQNKPITSEKIKELVVTQLGYDTRVTI KIKELVVTQLGYDTRVTILGHVQRGGTPSA K E L T R V 0 1 0 1 0 1 1 1 0 0 2 0 0 0 0 0 2 0 1 2 0 0 12 0 1392.7249 Q01813 Q01813 290 301 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 1.4386E-07 191.33 By MS/MS 5 0 1 1 1303700 1303700 0 3752 1246 3891 9124 6518 6518 1 53589 0 ELWFSDDPNVTK SEDPELPYMRPPLSKELWFSDDPNVTKTLR LSKELWFSDDPNVTKTLRFKQWNGKERSIY K E L T K T 0 0 1 2 0 0 1 0 0 0 1 1 0 1 1 1 1 1 0 1 0 0 12 0 1449.6776 O95831 O95831 178 189 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 6.3095E-24 241.4 By MS/MS By matching 6 2.6 1 3 1 1 1 1 7 1 32422000 32408000 14390 3753 409 3892 9125;9126;9127;9128;9129;9130;9131;9132 6519;6520;6521;6522;6523 6520 5 1324100 42581 ELYDKGGEQAIK QISQAYEVLSDAKKRELYDKGGEQAIKEGG KKRELYDKGGEQAIKEGGAGGGFGSPMDIF R E L I K E 1 0 0 1 0 1 2 2 0 1 1 2 0 0 0 0 0 0 1 0 0 0 12 1 1349.6827 P31689 P31689 62 73 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 1.6366E-15 215.83 By MS/MS By matching 6.5 0.764 4 1 1 4 2 55727000 55653000 74447 3754 755 3893 9133;9134;9135;9136;9137;9138 6524;6525;6526 6525 3 546830 228320 ELYDRYGEQGLR EISFAYEVLSNPEKRELYDRYGEQGLREGS EKRELYDRYGEQGLREGSGGGGGMDDIFSH R E L L R E 0 2 0 1 0 1 2 2 0 0 2 0 0 0 0 0 0 0 2 0 0 0 12 1 1497.7212 O60884 O60884 64 75 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2;3 9.1262E-05 176.6 By MS/MS 7.78 1.31 2 2 2 2 1 9 20169000 20169000 0 3755 273 3894 9139;9140;9141;9142;9143;9144;9145;9146;9147 6527;6528;6529 6529 3 615690 0 ELYDVYVDNQNVK SYVACTTEKIFEEKRELYDVYVDNQNVKTH KRELYDVYVDNQNVKTHHDHLQPLLKINSA R E L V K T 0 0 2 2 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 3 0 0 13 0 1597.7624 A4D1U4 A4D1U4 329 341 LCHN Protein LCHN yes yes 2 0.0018733 131.42 By MS/MS 1 0 1 1 265010 265010 0 3756 16 3895 9148 6530 6530 1 12948 0 ELYGQVLYR LKTIESANQQTDKLKELYGQVLYRLERYDE QTDKLKELYGQVLYRLERYDECLAVYRDLV K E L Y R L 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 2 1 0 0 9 0 1139.5975 O76094 O76094 113 121 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.00067186 186.09 By MS/MS 5 0 1 1 0 0 0 3757 346 3896 9149 6531 6531 1 0 0 ELYGSILQENPQVVYK TKVLNIVKPNIAHFRELYGSILQENPQVVY LYGSILQENPQVVYKSQQGWLEIDKSPEGQ R E L Y K S 0 0 1 0 0 2 2 1 0 1 2 1 0 0 1 1 0 0 2 2 0 0 16 0 1878.9727 Q96BW9 Q96BW9 214 229 TAMM41 Phosphatidate cytidylyltransferase, mitochondrial yes yes 2 3.2269E-50 280.21 By MS/MS 8 0.816 1 1 1 3 4668400 4668400 0 3758 2133 3897 9150;9151;9152 6532;6533 6532 2 227380 0 ELYIQHAK KTVKENWKNLSDSEKELYIQHAKEDETRYH NLSDSEKELYIQHAKEDETRYHNEMKSWEE K E L A K E 1 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 1000.5342 Q00059 Q00059 198 205 TFAM Transcription factor A, mitochondrial yes yes 2 0.008849 122.74 By MS/MS 9 0 1 1 920320 920320 0 3759 1229 3898 9153 6534 6534 1 528180 0 ELYLEDSPLELK IVDLIHDIQIVSTTRELYLEDSPLELKIQA TTRELYLEDSPLELKIQALDSEGNTFSTLA R E L L K I 0 0 0 1 0 0 3 0 0 0 4 1 0 0 1 1 0 0 1 0 0 0 12 0 1447.7446 Q8TEM1 Q8TEM1 127 138 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 4.7016E-05 166.66 By MS/MS 2 0.816 1 1 1 3 414670 414670 0 3760 2002 3899 9154;9155;9156 6535;6536;6537 6536 3 16445 0 ELYLEEALQNER PEVIRALKKSVCSGRELYLEEALQNERDLL SGRELYLEEALQNERDLLGTVWGGPANLEA R E L E R D 1 1 1 0 0 1 4 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 12 0 1505.7362 Q9NTX5 Q9NTX5 272 283 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 2.2864E-69 315.5 By MS/MS 8 0 1 1 1912600 1912600 0 3761 2633 3900 9157 6538 6538 1 126170 0 ELYLFDVLR PSPEKAEEESERLLRELYLFDVLRADRTTA SERLLRELYLFDVLRADRTTAAHGLELRVP R E L L R A 0 1 0 1 0 0 1 0 0 0 3 0 0 1 0 0 0 0 1 1 0 0 9 0 1166.6336 P08243 P08243 396 404 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 6.3215E-08 198.65 By MS/MS 6.5 0.5 1 1 2 5854900 5854900 0 3762 503 3901 9158;9159 6539 6539 1 46096 0 ELYLFDVLRADR PSPEKAEEESERLLRELYLFDVLRADRTTA LLRELYLFDVLRADRTTAAHGLELRVPFLD R E L D R T 1 2 0 2 0 0 1 0 0 0 3 0 0 1 0 0 0 0 1 1 0 0 12 1 1508.7987 P08243 P08243 396 407 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.00033186 156.83 By MS/MS 6 0 1 1 606710 606710 0 3763 503 3902 9160 6540 6540 1 4731.2 0 ELYPVEFR IPITLFMDLQAVLPRELYPVEFRNLLKWYA LQAVLPRELYPVEFRNLLKWYAKEFKDPLL R E L F R N 0 1 0 0 0 0 2 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 8 0 1051.5338 Q5BJF2 Q5BJF2 37 44 TMEM97 Transmembrane protein 97 yes yes 2 0.0084907 124.08 By MS/MS 9.5 0.5 1 1 2 2368600 2368600 0 3764 1598 3903 9161;9162 6541 6541 1 1439000 0 EMAIPVLEAR QSVRQALHSGQNQLKEMAIPVLEARACAAA QNQLKEMAIPVLEARACAAAGQSGLMALYE K E M A R A 2 1 0 0 0 0 2 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 10 0 1127.6009 P54886 P54886 150 159 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.003576 112.11 By MS/MS By matching 5.25 0.433 3 1 3 1 8296700 8244700 51966 3765 1019 3904;3905 9163;9164;9165;9166 6542;6543 6543 2 306280 153770 EMDEAATAEER EKDKDDDEVFEKKQKEMDEAATAEERGRLK KKQKEMDEAATAEERGRLKEELEEARDIAR K E M E R G 3 1 0 1 0 0 4 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 11 0 1250.5085 Q04637 Q04637 867 877 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 4.615E-22 240.38 By MS/MS 1.67 0.471 1 2 3 12517000 12517000 0 3766 1264 3906;3907 9167;9168;9169 6544;6545;6546 6545 1023 3 621960 0 EMDRETLIDVAR KEKALQFLEEVKVSREMDRETLIDVARTSL VSREMDRETLIDVARTSLRTKVHAELADVL R E M A R T 1 2 0 2 0 0 2 0 0 1 1 0 1 0 0 0 1 0 0 1 0 0 12 1 1446.7137 P40227 P40227 142 153 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 6.1814E-11 217.02 By MS/MS 6.36 2.38 1 2 2 3 3 3 3 3 2 22 194240000 194240000 0 3767 828 3908;3909 9170;9171;9172;9173;9174;9175;9176;9177;9178;9179;9180;9181;9182;9183;9184;9185;9186;9187;9188;9189;9190;9191 6547;6548;6549;6550;6551;6552;6553;6554;6555 6551 571 9 2733100 0 EMFLEDILR SCPVIYIQGRPFEVKEMFLEDILRTTGYTN RPFEVKEMFLEDILRTTGYTNKEMLKYKKE K E M L R T 0 1 0 1 0 0 2 0 0 1 2 0 1 1 0 0 0 0 0 0 0 0 9 0 1164.5849 Q9H6S0 Q9H6S0 377 385 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.014683 95.909 By MS/MS 3 0 1 1 139730 139730 0 3768 2511 3910 9192 6556 6556 1527 1 3647.6 0 EMFNPMYALFR DAGGLLREWYMIISREMFNPMYALFRTSPG IISREMFNPMYALFRTSPGDRVTYTINPSS R E M F R T 1 1 1 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 1 0 0 0 11 0 1417.6523 Q7Z6Z7 Q7Z6Z7 4072 4082 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 1.6613E-16 214.93 By MS/MS 2 0.816 1 1 1 3 332940 332940 0 3769 1803 3911 9193;9194;9195 6557 6557 1263;1264 1 14442 0 EMGLPVGTAAIAPIIAAVK KLHLKRGNFLVLKAKEMGLPVGTAAIAPII PVGTAAIAPIIAAVKDGKSITHEGREILAE K E M V K D 5 0 0 0 0 0 1 2 0 3 1 1 1 0 2 0 1 0 0 2 0 0 19 0 1821.0434 Q9BQ52 Q9BQ52 261 279 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.010427 73.273 By MS/MS 4 0 1 1 74663 74663 0 3770 2305 3912 9196 6558 6558 1455 1 2038.2 0 EMGVIAAMR IEVLSNTFQFTNEAREMGVIAAMRDGFGFI FTNEAREMGVIAAMRDGFGFIKCVDRDVRM R E M M R D 2 1 0 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 9 0 976.48341 O75534 O75534 349 357 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.029038 91.626 By MS/MS 4.5 0.5 1 1 2 926050 926050 0 3771 316 3913 9197;9198 6559 6559 1 35536 0 EMLFEFIDR TAMAVCNSISNPVTKEMLFEFIDRCTAASQ SNPVTKEMLFEFIDRCTAASQGQKRKHHLD K E M D R C 0 1 0 1 0 0 2 0 0 1 1 0 1 2 0 0 0 0 0 0 0 0 9 0 1198.5692 O60942 O60942 556 564 RNGTT mRNA-capping enzyme;Polynucleotide 5-triphosphatase;mRNA guanylyltransferase yes yes 2 0.0091791 106.6 By MS/MS 5 0 1 1 61495 61495 0 3772 275 3914 9199 6560 6560 1 2527.7 0 EMLQQSK RGVVDSEDLPLNISREMLQQSKILKVIRKN DLPLNISREMLQQSKILKVIRKNIVKKCLE R E M S K I 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 7 0 862.42185 P07900;P08238;Q58FF7 P08238 393 399 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 0.015689 138.24 By MS/MS 4.33 0.471 2 1 3 11542000 11542000 0 3773 501;494 3915;3916 9200;9201;9202 6561;6562;6563 6562 293 3 368090 0 EMMDSQPSTTVSK E M S K 0 0 0 1 0 1 1 0 0 0 0 1 2 0 1 3 2 0 0 1 0 0 13 0 1439.6272 REV__O60318 yes yes 2 0.04101 51.436 By MS/MS 9.5 0.5 1 1 2 1205000 1205000 0 + 3774 3018 3917 9203;9204 6564 6564 1739;1740 1 802990 0 EMMLVTSGAVAFGK ASIVEQVSVLQNQGREMMLVTSGAVAFGKQ REMMLVTSGAVAFGKQRLRHEILLSQSVRQ R E M G K Q 2 0 0 0 0 0 1 2 0 0 1 1 2 1 0 1 1 0 0 2 0 0 14 0 1439.7153 P54886 P54886 111 124 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.000236 123.79 By matching By MS/MS 5 0 2 1 1 395970 352900 43073 3775 1019 3918 9205;9206 6565;6566 6565 788;789 2 14505 127450 EMNPALGIDCLHK NPIQTMTEVRARQVKEMNPALGIDCLHKGT VKEMNPALGIDCLHKGTNDMKQQHVIETLI K E M H K G 1 0 1 1 1 0 1 1 1 1 2 1 1 0 1 0 0 0 0 0 0 0 13 0 1496.7116 P48643 P48643 484 496 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.0026896 107.93 By MS/MS By matching 6.75 0.829 2 1 1 3 1 15841000 15793000 48095 3776 909 3919 9207;9208;9209;9210 6567 6567 644 1 144330 147500 EMPLQDPR VIVTPGERRKQEMLKEMPLQDPRSREEAAR RKQEMLKEMPLQDPRSREEAARTQQLLLAT K E M P R S 0 1 0 1 0 1 1 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 8 0 984.46987 Q6UW78 Q6UW78 41 48 UQCC3 Ubiquinol-cytochrome-c reductase complex assembly factor 3 yes yes 2 0.04146 87.181 By MS/MS 10 0 1 1 215130 215130 0 3777 1727 3920 9211 6568 6568 1233 1 228670 0 EMRDELHVR TLDGKEYITPAQISKEMRDELHVRGGRVNI PAQISKEMRDELHVRGGRVNIVDLQQVINV K E M V R G 0 2 0 1 0 0 2 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 9 1 1183.5768 O94874 O94874 65 73 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.0094485 96.331 By MS/MS 4.5 0.5 1 1 2 1350500 1350500 0 3778 354 3921 9212;9213 6569 6569 1 52874 0 EMSSSTLNLVVAGAPK IGIIDGEYVVNPTRKEMSSSTLNLVVAGAP MSSSTLNLVVAGAPKSQIVMLEASAENILQ K E M P K S 2 0 1 0 0 0 1 1 0 0 2 1 1 0 1 3 1 0 0 2 0 0 16 0 1602.8287 Q8TCS8 Q8TCS8 208 223 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 2.6283E-07 158.25 By MS/MS 5 0 2 2 1507400 1507400 0 3779 1996 3922;3923 9214;9215 6570;6571 6571 1312 2 61959 0 EMTADVIELK LMMASESTLLAQEPREMTADVIELKGKFLI AQEPREMTADVIELKGKFLINLEGGDIREE R E M L K G 1 0 0 1 0 0 2 0 0 1 1 1 1 0 0 0 1 0 0 1 0 0 10 0 1147.5795 Q9NSE4 Q9NSE4 948 957 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0049656 126.24 By MS/MS 4 0 2 2 0 0 0 3780 2624 3924;3925 9216;9217 6572;6573 6573 1552 2 0 0 EMVPEFVVPDLTGFK GIGFLTSGWRFVQIKEMVPEFVVPDLTGFK EMVPEFVVPDLTGFKLKPYVSYLAPESEET K E M F K L 0 0 0 1 0 0 2 1 0 0 1 1 1 2 2 0 1 0 0 3 0 0 15 0 1706.8589 Q8IXM3 Q8IXM3 55 69 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.00068604 118.9 By MS/MS 10 0 1 1 195030 195030 0 3781 1873 3926 9218 6574;6575 6575 1283 2 207290 0 EMVSQYLYTSK EKQQPLREKDIIIKREMVSQYLYTSKAGMS IIKREMVSQYLYTSKAGMSQKESSKSAMMY R E M S K A 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 1 0 2 1 0 0 11 0 1347.6381 O60610 O60610 123 133 DIAPH1 Protein diaphanous homolog 1 yes yes 2 0.0042702 102.52 By MS/MS 3 0 1 1 519980 519980 0 3782 255 3927 9219 6576 6576 144 1 13574 0 ENADIIREQIR LRVEAEARARAKAERENADIIREQIRLKAA KAERENADIIREQIRLKAAEHRQTVLESIR R E N I R L 1 2 1 1 0 1 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 11 1 1355.7157 Q5T9A4;Q9NVI7 Q9NVI7 250 260 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 3.8502E-06 186.41 By MS/MS 5.5 0.5 1 1 2 9561900 9561900 0 3783 2655;1634 3928 9220;9221 6577;6578 6577 2 173520 0 ENAGEDPGLAR PGSGNPCHEASAAQKENAGEDPGLARQAPK AAQKENAGEDPGLARQAPKPRKQRSSLLEK K E N A R Q 2 1 1 1 0 0 2 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 11 0 1127.5207 P81605 P81605 43 53 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 2 0.00029168 151.22 By MS/MS By MS/MS 5 3.1 2 2 1 1 1 1 1 1 1 2 9 1964100 390190 1574000 3784 1200 3929 9222;9223;9224;9225;9226;9227;9228;9229;9230;9231;9232 6579;6580;6581;6582;6583;6584;6585 6585 7 19321 9144400 ENAPAIIFIDEIDAIATK GEGPRMVRDVFRLAKENAPAIIFIDEIDAI PAIIFIDEIDAIATKRFDAQTGADREVQRI K E N T K R 4 0 1 2 0 0 2 0 0 5 0 1 0 1 1 0 1 0 0 0 0 0 18 0 1943.0252 P43686 P43686 256 273 PSMC4 26S protease regulatory subunit 6B yes yes 2;3 5.5002E-05 153.94 By MS/MS 6 0 2 2 2333400 2333400 0 3785 867 3930 9233;9234 6586;6587 6587 2 18196 0 ENCILNLLTEK VKDAHWFYDTPGITKENCILNLLTEKEVNI GITKENCILNLLTEKEVNIVLPTQSIVPRT K E N E K E 0 0 2 0 1 0 2 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 11 0 1345.6912 Q8NC60 Q8NC60 503 513 NOA1 Nitric oxide-associated protein 1 yes yes 2 8.1381E-05 164.64 By MS/MS 5.5 0.5 1 1 2 1131100 1131100 0 3786 1951 3931 9235;9236 6588 6588 1 37588 0 ENDFDRLVLQYAPSA DAHRSHPFIKEYQAKENDFDRLVLQYAPSA ENDFDRLVLQYAPSA_______________ K E N S A - 2 1 1 2 0 1 1 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 15 1 1736.837 O14579 O14579 294 308 COPE Coatomer subunit epsilon yes yes 2 0.0019867 131.12 By MS/MS 8 0 1 1 1381700 1381700 0 3787 115 3932 9237 6589 6589 1 91152 0 ENDYYTPTGEFR MVRIGGSTDTGKHIKENDYYTPTGEFRVDR HIKENDYYTPTGEFRVDREGSPVLLNCLMY K E N F R V 0 1 1 1 0 0 2 1 0 0 0 0 0 1 1 0 2 0 2 0 0 0 12 0 1490.6314 P46977 P46977 614 625 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 4.6081E-24 244.27 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 5277600 5277600 0 3788 893 3933 9238;9239;9240;9241;9242;9243 6590;6591;6592 6590 3 185640 0 ENEITGALLPCLDESR RRGGFEEPVLLKNIRENEITGALLPCLDES NEITGALLPCLDESRFENLGVSSLGERKKL R E N S R F 1 1 1 1 1 0 3 1 0 1 3 0 0 0 1 1 1 0 0 0 0 0 16 0 1815.8673 Q9Y3Z3 Q9Y3Z3 70 85 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 2 0.0055919 103.11 By MS/MS 5 0 1 1 194780 194780 0 3789 2944 3934 9244 6593 6593 1 8006.1 0 ENEQSLLEYLEK AGFDSDYDQALADIRENEQSLLEYLEKQRN DIRENEQSLLEYLEKQRNRIGCRTIVYWGI R E N E K Q 0 0 1 0 0 1 4 0 0 0 3 1 0 0 0 1 0 0 1 0 0 0 12 0 1493.725 P52701 P52701 946 957 MSH6 DNA mismatch repair protein Msh6 yes yes 2 3.5347E-05 169.21 By MS/MS 3 0 1 1 433060 433060 0 3790 989 3935 9245 6594 6594 1 11305 0 ENEVQSLHSK HEAAQQDLQSKFVAKENEVQSLHSKLTDTL KFVAKENEVQSLHSKLTDTLVSKQQLEQRL K E N S K L 0 0 1 0 0 1 2 0 1 0 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1169.5677 Q86UP2 Q86UP2 526 535 KTN1 Kinectin yes yes 2 0.025089 88.819 By MS/MS 7 1.58 1 1 1 1 4 76758000 76758000 0 3791 1823 3936 9246;9247;9248;9249 6595 6595 1 973730 0 ENFAGEATLQR QGTSKIDDIWNLEVKENFAGEATLQRIYSL LEVKENFAGEATLQRIYSLWEHSTKNHLQL K E N Q R I 2 1 1 0 0 1 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 11 0 1234.5942 P04114 P04114 3548 3558 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 4.371E-29 252.14 By MS/MS 5.14 2.9 1 1 1 1 1 1 1 7 5013000 5013000 0 3792 445 3937 9250;9251;9252;9253;9254;9255;9256 6596;6597;6598;6599 6596 4 346180 0 ENFVDIVDAK LGPPLNIHYLKLIDRENFVDIVDAKLKIPV KLIDRENFVDIVDAKLKIPVSGSKSEGLLY R E N A K L 1 0 1 2 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 10 0 1148.5714 Q9GZY4 Q9GZY4 79 88 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 2 0.00021405 156.16 By MS/MS 10 0 1 1 149340 149340 0 3793 2444 3938 9257 6600 6600 1 158740 0 ENGADSILDLGLVDSSEK ARVDEAMELIIAHGRENGADSILDLGLVDS ADSILDLGLVDSSEKVQQENRKRHGSSRSV R E N E K V 1 0 1 3 0 0 2 2 0 1 3 1 0 0 0 3 0 0 0 1 0 0 18 0 1860.8953 O95071 O95071 2455 2472 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 4.0698E-07 150.34 By MS/MS 2.5 1.12 1 1 1 1 4 490240 490240 0 3794 364 3939 9258;9259;9260;9261 6601;6602;6603;6604 6604 4 17396 0 ENGELLPILR KGELVGGLDIVKELKENGELLPILRGEN__ VKELKENGELLPILRGEN____________ K E N L R G 0 1 1 0 0 0 2 1 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1152.6503 O76003 O76003 323 332 GLRX3 Glutaredoxin-3 yes yes 2 0.00023303 155.42 By MS/MS 7 0 1 1 1423800 1423800 0 3795 342 3940 9262 6605 6605 1 25443 0 ENGELLPILRGEN KGELVGGLDIVKELKENGELLPILRGEN__ LKENGELLPILRGEN_______________ K E N E N - 0 1 2 0 0 0 3 2 0 1 3 0 0 0 1 0 0 0 0 0 0 0 13 1 1452.7573 O76003 O76003 323 335 GLRX3 Glutaredoxin-3 yes yes 2 0.00032914 196.67 By MS/MS 7 0 1 1 747270 747270 0 3796 342 3941 9263 6606 6606 1 13354 0 ENGLEVLQEAFSR HTVNCSALNAEELRRENGLEVLQEAFSRCV RRENGLEVLQEAFSRCVAVLTRASKPSDMS R E N S R C 1 1 1 0 0 1 3 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 13 0 1490.7365 O75165 O75165 1443 1455 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.053991 70.728 By MS/MS 2.5 0.5 1 1 2 74880 74880 0 3797 287 3942 9264;9265 6607 6607 1 2606.6 0 ENITIVDISR ______________________________ KSNNKENITIVDISRKINQLPEAERNLLEN K E N S R K 0 1 1 1 0 0 1 0 0 3 0 0 0 0 0 1 1 0 0 1 0 0 10 0 1158.6245 Q9H061 Q9H061 10 19 TMEM126A Transmembrane protein 126A yes yes 2 8.0952E-07 185.33 By MS/MS 9.5 0.5 1 1 2 1056500 1056500 0 3798 2447 3943 9266;9267 6608 6608 1 643010 0 ENKEFLEFR EGGYPALTEVMNKLRENKEFLEFRKARSDM VMNKLRENKEFLEFRKARSDMLLSRKNQLL R E N F R K 0 1 1 0 0 0 3 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 9 1 1210.5982 O75323 O75323 146 154 GBAS Protein NipSnap homolog 2 yes yes 2 0.013537 131.62 By MS/MS 8.5 0.5 1 1 2 9928300 9928300 0 3799 296 3944 9268;9269 6609 6609 1 681460 0 ENKEFLEFRK EGGYPALTEVMNKLRENKEFLEFRKARSDM MNKLRENKEFLEFRKARSDMLLSRKNQLLL R E N R K A 0 1 1 0 0 0 3 0 0 0 1 2 0 2 0 0 0 0 0 0 0 0 10 2 1338.6932 O75323 O75323 146 155 GBAS Protein NipSnap homolog 2 yes yes 3 0.015417 92.239 By MS/MS 8 0 1 1 5559800 5559800 0 3800 296 3945 9270 6610 6610 1 366780 0 ENLATVEGNFASIDER KDNTTLLTQVQTTMRENLATVEGNFASIDE NLATVEGNFASIDERMKKLGK_________ R E N E R M 2 1 2 1 0 0 3 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 16 0 1763.8326 Q13561 Q13561 380 395 DCTN2 Dynactin subunit 2 yes yes 2 5.7783E-50 272.74 By MS/MS 6.5 0.5 1 1 2 10397000 10397000 0 3801 1382 3946 9271;9272 6611 6611 1 84403 0 ENLCSTFCK ETYKQEKNMAINPSKENLCSTFCKEVVRNA AINPSKENLCSTFCKEVVRNANEEEYSIGS K E N C K E 0 0 1 0 2 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 9 0 1157.4845 CON__P02663 CON__P02663 33 41 yes yes 2 0.00786 109.48 By MS/MS 5 0 1 1 1175100 1175100 0 + 3802 38 3947 9273 6612 6612 1 48301 0 ENLEEEAIIMK LLQAETDRRTLQMLRENLEEEAIIMKDVPD QMLRENLEEEAIIMKDVPDWKVGESVFHTT R E N M K D 1 0 1 0 0 0 4 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 11 0 1317.6486 Q9P0J0 Q9P0J0 89 99 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2 7.4388E-49 292.68 By MS/MS 10 0 2 2 3050000 3050000 0 3803 2726 3948;3949 9274;9275 6613;6614 6614 1588 2 3241800 0 ENLGVALEIDGLEEK ______________________________ ENLGVALEIDGLEEKLSQCRRDLEAVNSRL R E N E K L 1 0 1 1 0 0 4 2 0 1 3 1 0 0 0 0 0 0 0 1 0 0 15 0 1627.8305 Q9P0B6 Q9P0B6 7 21 CCDC167 Coiled-coil domain-containing protein 167 yes yes 2 1.8367E-14 205.96 By MS/MS 10 0 1 1 323490 323490 0 3804 2724 3950 9276 6615 6615 1 343830 0 ENLISALEEAK VVTHGGRVLAVTAIRENLISALEEAKKGLA TAIRENLISALEEAKKGLAAIKFEGAIYRK R E N A K K 2 0 1 0 0 0 3 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1215.6347 P22102 P22102 394 404 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 9.6755E-07 178.54 By MS/MS 4 0 1 1 439430 439430 0 3805 655 3951 9277 6616 6616 1 11996 0 ENLLDFIK KFDEGRNNFEGEVTKENLLDFIKHNQLPLV FEGEVTKENLLDFIKHNQLPLVIEFTEQTA K E N I K H 0 0 1 1 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 8 0 990.5386 P07237 P07237 223 230 P4HB Protein disulfide-isomerase yes yes 2 0.010309 119.29 By MS/MS 6 0 1 1 498350 498350 0 3806 487 3952 9278 6617 6617 1 3886.2 0 ENLPVSSDGNLPQQAASAPSR LRDRLWKKKAALQQKENLPVSSDGNLPQQA SDGNLPQQAASAPSRVAAVGPYIQSSTMPR K E N S R V 3 1 2 1 0 2 1 1 0 0 2 0 0 0 3 4 0 0 0 1 0 0 21 0 2137.04 Q13625 Q13625 323 343 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 4.5379E-08 140.93 By MS/MS 3 0 1 1 722360 722360 0 3807 1391 3953 9279 6618 6618 1 18857 0 ENLTELSGGQR LDGLEFKVALGNTWKENLTELSGGQRSLVA NTWKENLTELSGGQRSLVALSLILSMLLFK K E N Q R S 0 1 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1202.5891 O95347 O95347 1080 1090 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00093157 134.57 By MS/MS 3 0 1 1 2222900 2222900 0 3808 385 3954 9280 6619 6619 1 58029 0 ENLVQAFK LKYLLLSDLPGVREKENLVQAFKTALPSLE LPGVREKENLVQAFKTALPSLELKLQLK__ K E N F K T 1 0 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 947.50763 Q99766 Q99766 195 202 ATP5S ATP synthase subunit s, mitochondrial yes yes 2 0.0066989 130.77 By MS/MS 9 0 1 1 215740 215740 0 3809 2290 3955 9281 6620 6620 1 123820 0 ENNVDAVHPGYGFLSER VQAYLHIPDIIKVAKENNVDAVHPGYGFLS NVDAVHPGYGFLSERADFAQACQDAGVRFI K E N E R A 1 1 2 1 0 0 2 2 1 0 1 0 0 1 1 1 0 0 1 2 0 0 17 0 1902.886 P11498 P11498 108 124 PC Pyruvate carboxylase, mitochondrial yes yes 2;3 1.377E-13 179.93 By MS/MS 4 0.707 1 2 1 4 4861200 4861200 0 3810 555 3956 9282;9283;9284;9285 6621;6622 6622 2 136290 0 ENNVVFNR LHKDSKWYQQWKDFKENNVVFNRFFEMKMK QQWKDFKENNVVFNRFFEMKMKYDESDNAF K E N N R F 0 1 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 990.48829 O43615 O43615 250 257 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 3.806E-05 198.87 By MS/MS 7 0 1 1 11912000 11912000 0 3811 209 3957 9286 6623 6623 1 212870 0 ENPCQEQGDVIQIK RPEKALILGFMAGSRENPCQEQGDVIQIKL RENPCQEQGDVIQIKLSEHTEDLPKADGQG R E N I K L 0 0 1 1 1 3 2 1 0 2 0 1 0 0 1 0 0 0 0 1 0 0 14 0 1656.7777 Q9H3P2 Q9H3P2 468 481 NELFA Negative elongation factor A yes yes 2 1.5594E-12 210.15 By MS/MS 5 0 1 1 1346900 1346900 0 3812 2490 3958 9287 6624 6624 1 55362 0 ENPGSGEYDFR GSEPGKQGTVYAQVKENPGSGEYDFRYIFV AQVKENPGSGEYDFRYIFVEIESYPRRTII K E N F R Y 0 1 1 1 0 0 2 2 0 0 0 0 0 1 1 1 0 0 1 0 0 0 11 0 1269.5262 Q9BVV7 Q9BVV7 214 224 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 0.0064458 101.66 By MS/MS 9 0 1 1 2243200 2243200 0 3813 2386 3959 9288 6625 6625 1 1287400 0 ENPIEDDLIFR AVKRPASMYSTGKRKENPIEDDLIFRVGTK GKRKENPIEDDLIFRVGTKGRNKGEFTNLQ K E N F R V 0 1 1 2 0 0 2 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 11 0 1359.667 Q9C040 Q9C040 465 475 TRIM2 Tripartite motif-containing protein 2 yes yes 2 0.0033885 114.5 By MS/MS 5 0 1 1 93902 93902 0 3814 2431 3960 9289 6626 6626 1 3859.7 0 ENPLLPEEEEQR EFENRTRNVDVYDKRENPLLPEEEEQRAIA DKRENPLLPEEEEQRAIAKIKMLGNIKFIG R E N Q R A 0 1 1 0 0 1 5 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 12 0 1481.6998 P78344 P78344 189 200 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00035677 150.04 By MS/MS 4 0.816 1 1 1 3 5837400 5837400 0 3815 1192 3961 9290;9291;9292 6627 6627 1 164450 0 ENPLLPEEEEQRAIAK EFENRTRNVDVYDKRENPLLPEEEEQRAIA NPLLPEEEEQRAIAKIKMLGNIKFIGELGK R E N A K I 2 1 1 0 0 1 5 0 0 1 2 1 0 0 2 0 0 0 0 0 0 0 16 1 1864.9531 P78344 P78344 189 204 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.01543 116.84 By MS/MS 4 0 1 1 1379000 1379000 0 3816 1192 3962 9293 6628 6628 1 37644 0 ENPVINDCCR LRKLLSRYRLPVATRENPVINDCCRGAMLS PVATRENPVINDCCRGAMLSLATGLAHSGS R E N C R G 0 1 2 1 2 0 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 10 0 1275.5336 Q9Y4C2 Q9Y4C2 480 489 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 0.00093849 125.71 By MS/MS 4 0 1 1 311790 311790 0 3817 2952 3963 9294 6629 6629 1 8511.5 0 ENQEGAANVNVR HTLLEDYQIVDNSQRENQEGAANVNVRGEK SQRENQEGAANVNVRGEKDEQTKEVKEAKK R E N V R G 2 1 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 12 0 1299.6167 Q8N0X7 Q8N0X7 637 648 SPG20 Spartin yes yes 2 1.0796E-23 233.84 By MS/MS By matching 5 0 2 1 1 1093100 1080700 12443 3818 1889 3964 9295;9296 6630 6630 1 44420 36818 ENQTAVDVFR LAESWNAAFLESSAKENQTAVDVFRRIILE ESSAKENQTAVDVFRRIILEAEKMDGAASQ K E N F R R 1 1 1 1 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 10 0 1177.5728 Q15382 Q15382 152 161 RHEB GTP-binding protein Rheb yes yes 2 1.3046E-15 218.6 By MS/MS 10 0 1 1 478800 478800 0 3819 1493 3965 9297 6631 6631 1 508910 0 ENQWFDVGVIK KPDLPPPPSKAPMKKENQWFDVGVIKGTNV PMKKENQWFDVGVIKGTNVMVTHYFLPPDD K E N I K G 0 0 1 1 0 1 1 1 0 1 0 1 0 1 0 0 0 1 0 2 0 0 11 0 1333.6667 P51610 P51610 1809 1819 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 2 3.907E-11 210.08 By MS/MS 4 0 1 1 307820 307820 0 3820 970 3966 9298 6632 6632 1 8403.1 0 ENSETVVTGSLDDLVK HDDAIWSVAWGTNKKENSETVVTGSLDDLV NSETVVTGSLDDLVKVWKWRDERLDLQWSL K E N V K V 0 0 1 2 0 0 2 1 0 0 2 1 0 0 0 2 2 0 0 3 0 0 16 0 1704.8418 Q9GZS3 Q9GZS3 30 45 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 2 1.6558E-38 256.13 By MS/MS 8 0 1 1 4470800 4470800 0 3821 2442 3967 9299 6633 6633 1 294940 0 ENSFYVDTVR HITKVEERLTTICQRENSFYVDTVRAFRDR TICQRENSFYVDTVRAFRDRRYEFKGLHKV R E N V R A 0 1 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 2 0 0 10 0 1228.5724 Q07864 Q07864 750 759 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.000694 137.05 By MS/MS 1.5 0.5 1 1 2 398590 398590 0 3822 1283 3968 9300;9301 6634 6634 1 19694 0 ENTAAENGLTVR RNWIWTSYIINQAKKENTAAENGLTVRLQT AKKENTAAENGLTVRLQTFLSKRPMPLSAR K E N V R L 2 1 2 0 0 0 2 1 0 0 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1273.6262 Q12789 Q12789 1144 1155 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 7.4484E-11 199.03 By MS/MS 2.5 0.5 1 1 2 416750 416750 0 3823 1306 3969 9302;9303 6635 6635 1 17767 0 ENTYPFLAMIMLK STNKPEGYRVSQALRENTYPFLAMIMLKDR LRENTYPFLAMIMLKDRRMTVVGRLEGLIQ R E N L K D 1 0 1 0 0 0 1 0 0 1 2 1 2 1 1 0 1 0 1 0 0 0 13 0 1569.7935 Q96CS3 Q96CS3 227 239 FAF2 FAS-associated factor 2 yes yes 2 2.9651E-05 160.91 By MS/MS 6 0 2 2 757530 757530 0 3824 2140 3970;3971 9304;9305 6636;6637;6638 6636 1391 3 5907.2 0 ENVATTDTLESTTVGTSV KEVLLFPAMKPEDKKENVATTDTLESTTVG ATTDTLESTTVGTSV_______________ K E N S V - 1 0 1 1 0 0 2 1 0 0 1 0 0 0 0 2 6 0 0 3 0 0 18 0 1823.8636 Q15046 Q15046 580 597 KARS Lysine--tRNA ligase yes yes 2 1.4789E-05 138.31 By MS/MS 5 0 1 1 957860 957860 0 3825 1471 3972 9306 6639 6639 1 39372 0 ENVDYIIQELR IMKHLKAICFLRPTKENVDYIIQELRRPKY RPTKENVDYIIQELRRPKYTIYFIYFSNVI K E N L R R 0 1 1 1 0 1 2 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1390.7092 Q9NRW7 Q9NRW7 77 87 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 2.7542E-16 225.93 By MS/MS 5 0 1 1 632700 632700 0 3826 2612 3973 9307 6640 6640 1 26006 0 ENVLIGDGAGFK SDTRGIVFEDVKVPKENVLIGDGAGFKVAM VPKENVLIGDGAGFKVAMGAFDKTRPVVAA K E N F K V 1 0 1 1 0 0 1 3 0 1 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1218.6245 P11310 P11310 260 271 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00033826 146.16 By MS/MS By matching 7.67 0.943 2 1 2 1 22576000 22525000 50742 3827 552 3974 9308;9309;9310 6641;6642 6641 2 838970 208310 ENVLLSSELQR KEWNALETECHSLKRENVLLSSELQRQEKE SLKRENVLLSSELQRQEKELHNSQKQSLEL R E N Q R Q 0 1 1 0 0 1 2 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1286.683 Q14BN4 Q14BN4 679 689 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.00042027 145.99 By MS/MS By matching 4.33 0.471 2 1 2 1 1418600 1394000 24613 3828 1454 3975 9311;9312;9313 6643;6644 6644 2 42372 51431 ENVNATENCISAVGK PLLVRVIQSADSKTKENVNATENCISAVGK ENVNATENCISAVGKIMKFKPDCVNVEEVL K E N G K I 2 0 3 0 1 0 2 1 0 1 0 1 0 0 0 1 1 0 0 2 0 0 15 0 1604.7464 O00410 O00410 964 978 IPO5 Importin-5 yes yes 2 7.9879E-08 174.21 By MS/MS By matching 4.33 0.471 2 1 2 1 3063700 3042400 21370 3829 91 3976 9314;9315;9316 6645 6645 1 87911 44654 ENVNLAQIR DLIFAFDEIVALGYRENVNLAQIRTFTEMD VALGYRENVNLAQIRTFTEMDSHEEKVFRA R E N I R T 1 1 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1055.5724 P48444 P48444 123 131 ARCN1 Coatomer subunit delta yes yes 2 2.7558E-11 219.25 By MS/MS By matching 6 0 2 1 1 13886000 13842000 44121 3830 903 3977 9317;9318 6646 6646 1 107940 135320 ENYLEENLLYAPSLR AGWEEVLRWQDRSSRENYLEENLLYAPSLR ENYLEENLLYAPSLRFIHGLIKQFSENIYE R E N L R F 1 1 2 0 0 0 3 0 0 0 4 0 0 0 1 1 0 0 2 0 0 0 15 0 1822.9101 Q7L2E3 Q7L2E3 959 973 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 1.171E-09 177.1 By MS/MS 3.5 0.5 1 1 2 2094400 2094400 0 3831 1763 3978 9319;9320 6647;6648 6648 2 55492 0 EPATINYPFEK ELFRGLGMTLSYLFREPATINYPFEKGPLS YLFREPATINYPFEKGPLSPRFRGEHALRR R E P E K G 1 0 1 0 0 0 2 0 0 1 0 1 0 1 2 0 1 0 1 0 0 0 11 0 1307.6398 O00217 O00217 78 88 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 2 0.0064458 101.66 By MS/MS 9.5 0.5 1 1 2 2019600 2019600 0 3832 79 3979 9321;9322 6649 6649 1 1190300 0 EPELQQYVPQLQNNTILR RVTKVLNWVREQPEKEPELQQYVPQLQNNT LQQYVPQLQNNTILRLLQQVSQIYQSIEFS K E P L R L 0 1 2 0 0 4 2 0 0 1 3 0 0 0 2 0 1 0 1 1 0 0 18 0 2182.1382 Q14152 Q14152 421 438 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.029506 91.62 By MS/MS 3 0 1 1 340210 340210 0 3833 1409 3980 9323 6650 6650 1 8881.3 0 EPEQPPALWR AWPLALVASLGSAEKEPEQPPALWRKVVDF GSAEKEPEQPPALWRKVVDFLLKAIMRTMW K E P W R K 1 1 0 0 0 1 2 0 0 0 1 0 0 0 3 0 0 1 0 0 0 0 10 0 1221.6142 Q8NF37 Q8NF37 83 92 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.00085849 129.42 By MS/MS 6 0 1 1 2524000 2524000 0 3834 1967 3981 9324 6651 6651 1 19682 0 EPEVLSTMAIIVNK DAVLIDYQRNVPAAREPEVLSTMAIIVNKL REPEVLSTMAIIVNKLGGHITAEIPQIFDA R E P N K L 1 0 1 0 0 0 2 0 0 2 1 1 1 0 1 1 1 0 0 2 0 0 14 0 1542.8327 O14980 O14980 797 810 XPO1 Exportin-1 yes yes 2 9.9292E-06 164.64 By MS/MS 4 0 2 2 943910 943910 0 3835 142 3982;3983 9325;9326 6652;6653 6652 87 2 25768 0 EPFLQQLK PVVPNYDNVHPNYHKEPFLQQLKVFSDEVQ VHPNYHKEPFLQQLKVFSDEVQQQAQLSTI K E P L K V 0 0 0 0 0 2 1 0 0 0 2 1 0 1 1 0 0 0 0 0 0 0 8 0 1001.5546 Q9Y262 Q9Y262 438 445 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.012435 116.54 By MS/MS 5.5 0.5 1 1 2 2991400 2991400 0 3836 2868 3984 9327;9328 6654 6654 1 72449 0 EPGEFALLR LVCPSRYEAAVPDPREPGEFALLRSCQEVF AVPDPREPGEFALLRSCQEVFDKLARVAQP R E P L R S 1 1 0 0 0 0 2 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 9 0 1030.5447 O43505 O43505 172 180 B4GAT1 Beta-1,4-glucuronyltransferase 1 yes yes 2 0.0028534 120.62 By MS/MS 6 1.41 1 1 1 1 1 5 4236000 4236000 0 3837 205 3985 9329;9330;9331;9332;9333 6655 6655 1 56377 0 EPLINTYISVPK EQANDDARTFYIIEREPLINTYISVPKENS IEREPLINTYISVPKENSTLNCASFTAGIV R E P P K E 0 0 1 0 0 0 1 0 0 2 1 1 0 0 2 1 1 0 1 1 0 0 12 0 1372.7602 Q8IUR0 Q8IUR0 121 132 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 2 0.002028 121.61 By MS/MS 9 0 1 1 427390 427390 0 3838 1853 3986 9334 6656 6656 1 245280 0 EPLSLINVR ARPGPGVWDPNWDRREPLSLINVRKRNVES PNWDRREPLSLINVRKRNVESGEEELASKL R E P V R K 0 1 1 0 0 0 1 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 9 0 1039.6026 Q96HS1 Q96HS1 66 74 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.050433 81.548 By MS/MS 8.5 1.12 1 1 1 1 4 28793000 28793000 0 3839 2196 3987 9335;9336;9337;9338 6657 6657 1 3225200 0 EPLVATNLPGR QAAKKVHTSKGDLPREPLVATNLPGRGQLQ DLPREPLVATNLPGRGQLQKLASERNLFIS R E P G R G 1 1 1 0 0 0 1 1 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1165.6455 P42166 P42166 254 264 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0027886 117.01 By MS/MS 5 0 1 1 1028900 1028900 0 3840 845 3988 9339 6658 6658 1 42292 0 EPNPPIDEVISTPGVVAR QQLSATQKFRKLLSKEPNPPIDEVISTPGV PPIDEVISTPGVVARFVEFLKRKENCTLQF K E P A R F 1 1 1 1 0 0 2 1 0 2 0 0 0 0 4 1 1 0 0 3 0 0 18 0 1888.9894 P52294 P52294 113 130 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 2 0.0087834 84.566 By MS/MS 5.5 0.5 1 1 2 2012400 2012400 0 3841 984 3989 9340;9341 6659 6659 1 19956 0 EPSPPIDEVINTPR LQLATTQKFRKLLSKEPSPPIDEVINTPRV KEPSPPIDEVINTPRVVDRFVEFLKRNENC K E P P R V 0 1 1 1 0 0 2 0 0 2 0 0 0 0 4 1 1 0 0 1 0 0 14 0 1562.794 O60684 O60684 111 124 KPNA6 Importin subunit alpha-7 yes yes 2 0.047226 70.685 By MS/MS 6 0 1 1 3924700 3924700 0 3842 258 3990 9342 6660 6660 1 30605 0 EPVEAAPAAEPVPAST HPPQDGEDEPTLVQKEPVEAAPAAEPVPAS PVEAAPAAEPVPAST_______________ K E P S T - 5 0 0 0 0 0 3 0 0 0 0 0 0 0 4 1 1 0 0 2 0 0 16 0 1534.7515 Q16740 Q16740 262 277 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 2 0.00050687 121.9 By MS/MS 8.5 0.5 1 1 2 1220900 1220900 0 3843 1545 3991 9343;9344 6661 6661 1 128660 0 EPVQLETLSIR MNTHLKAVKMTLKNREPVQLETLSIRGNNI LKNREPVQLETLSIRGNNIRYFILPDSLPL R E P I R G 0 1 0 0 0 1 2 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 11 0 1283.7085 P62314 P62314 51 61 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 2 0.0092788 99.013 By MS/MS 10 0 1 1 715700 715700 0 3844 1129 3992 9345 6662 6662 1 760710 0 EPVVVETVEEK GTPCREFWSRFRKEKEPVVVETVEEKKEPI RKEKEPVVVETVEEKKEPILVCPPLRSRAY K E P E K K 0 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 1 0 0 4 0 0 11 0 1256.65 Q8N5N7 Q8N5N7 35 45 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 2 0.024237 85.533 By MS/MS 10 0 1 1 270010 270010 0 3845 1925 3993 9346 6663 6663 1 287000 0 EQADFALEALAK RIKVGRDYVQKAQTKEQADFALEALAKATY QTKEQADFALEALAKATYERLFRWLVLRLN K E Q A K A 4 0 0 1 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1304.6612 Q7Z406 Q7Z406 434 445 MYH14 Myosin-14 yes yes 2 0.00013186 185.96 By MS/MS 2 0 1 1 841770 841770 0 3846 1788 3994 9347 6664 6664 1 41840 0 EQADFAVEALAK RIKVGRDYVQKAQTKEQADFAVEALAKATY QTKEQADFAVEALAKATYERLFRWLVHRIN K E Q A K A 4 0 0 1 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1290.6456 P35580 P35580 415 426 MYH10 Myosin-10 no no 2 0.00014976 164.43 By MS/MS 2 0 1 1 594040 594040 0 3847 794 3995 9348 6665 6665 1 29527 0 EQAEEERYFR GAGSIREAGGAFGKREQAEEERYFRAQSRE AFGKREQAEEERYFRAQSREQLAALKKHHE R E Q F R A 1 2 0 0 0 1 4 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 10 1 1355.6106 Q9UII2 Q9UII2 51 60 ATPIF1 ATPase inhibitor, mitochondrial yes yes 2 5.9801E-06 190.62 By MS/MS 10 0 1 1 1444500 1444500 0 3848 2792 3996 9349 6666 6666 1 1535300 0 EQAELTGLR DGSLEKDRTLTPLGREQAELTGLRLASLGL LTPLGREQAELTGLRLASLGLKFNKIVHSS R E Q L R L 1 1 0 0 0 1 2 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1015.5298 Q96HS1 Q96HS1 126 134 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.004042 117.81 By MS/MS 8.5 1.12 1 1 1 1 4 64109000 64109000 0 3849 2196 3997 9350;9351;9352;9353 6667;6668 6668 2 6350600 0 EQAKQEYQAQK HLDLVQLIQREQQQREQAKQEYQAQKAAKA QQQREQAKQEYQAQKAAKASA_________ R E Q Q K A 2 0 0 0 0 4 2 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 11 1 1349.6575 Q92552 Q92552 398 408 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 1.1265E-22 251.64 By MS/MS By matching 7 0 2 1 1 1473200 1462200 10973 3850 2059 3998 9354;9355 6669 6669 1 26130 45047 EQALQLAQK AIIKEPIDIEEGIKKEQALQLAQKMGFPPN EEGIKKEQALQLAQKMGFPPNIVESAAENM K E Q Q K M 2 0 0 0 0 3 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1027.5662 Q9P2R7 Q9P2R7 217 225 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 5.1878E-10 214.29 By MS/MS 7.5 0.5 1 1 2 19413000 19413000 0 3851 2741 3999 9356;9357 6670 6670 1 353420 0 EQASIDGTSLR E Q L R 1 1 0 1 0 1 1 1 0 1 1 0 0 0 0 2 1 0 0 0 0 0 11 0 1175.5782 REV__Q49A17 yes yes 2 0.0014131 128.12 By MS/MS 5 0 1 1 499100 499100 0 + 3852 3031 4000 9358 6671 6671 1 20515 0 EQATSVLLADPCFQLR GILVQLLVRGPASEREQATSVLLADPCFQL QATSVLLADPCFQLRSICYLLGQPEPPAPG R E Q L R S 2 1 0 1 1 2 1 0 0 0 3 0 0 1 1 1 1 0 0 1 0 0 16 0 1846.9247 Q5XPI4 Q5XPI4 1169 1184 RNF123 E3 ubiquitin-protein ligase RNF123 yes yes 2 6.9957E-06 144.51 By MS/MS 3 0 1 1 242240 242240 0 3853 1665 4001 9359 6672 6672 1 6323.7 0 EQEAGLLQFLR TVRVKALFAISCLVREQEAGLLQFLRLDGF CLVREQEAGLLQFLRLDGFSVLMRAMQQQV R E Q L R L 1 1 0 0 0 2 2 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 11 0 1302.6932 Q9NZL4 Q9NZL4 218 228 HSPBP1 Hsp70-binding protein 1 yes yes 2 5.7711E-05 185.81 By MS/MS 7.5 0.5 1 1 2 2580900 2580900 0 3854 2713 4002 9360;9361 6673;6674 6674 2 112660 0 EQEIEDQKNPR LFKHNDMADLERLLKEQEIEDQKNPRKARV RLLKEQEIEDQKNPRKARVTRRFIVVEGLY K E Q P R K 0 1 1 1 0 2 3 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 11 1 1384.6583 O15269 O15269 223 233 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.00019373 172.98 By MS/MS 6 0 1 1 1916900 1916900 0 3855 165 4003 9362 6675 6675 1 14948 0 EQELQVVR LFSVLPELSQSLGLREQELQVVRASGKESS SQSLGLREQELQVVRASGKESSGLVLLSSC R E Q V R A 0 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 999.53491 Q6P087 Q6P087 125 132 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 0.017402 124.59 By MS/MS 8 0 1 1 4347900 4347900 0 3856 1697 4004 9363 6676 6676 1 286830 0 EQFCDYLFQQAVK DVVKCILVASPGFVREQFCDYLFQQAVKTD VREQFCDYLFQQAVKTDNKLLLENRSKFLQ R E Q V K T 1 0 0 1 1 3 1 0 0 0 1 1 0 2 0 0 0 0 1 1 0 0 13 0 1674.7712 Q9BRX2 Q9BRX2 215 227 PELO Protein pelota homolog yes yes 2 1.2792E-11 199.33 By MS/MS 7 0 1 1 301120 301120 0 3857 2331 4005 9364 6677 6677 1 5381 0 EQFDTLTPEPPVDPNQEVPPGPPR KQEVENFKKVNMISREQFDTLTPEPPVDPN PPVDPNQEVPPGPPRFQQVPTDALANKLFG R E Q P R F 0 1 1 2 0 2 3 1 0 0 1 0 0 1 8 0 2 0 0 2 0 0 24 0 2655.2817 Q6PKG0 Q6PKG0 718 741 LARP1 La-related protein 1 yes yes 3 4.683E-05 95.206 By MS/MS 3 0 1 1 641000 641000 0 3858 1719 4006 9365 6678 6678 1 16733 0 EQFVEFRDK HDGNTDEPEWVKTEREQFVEFRDKNRDGKM WVKTEREQFVEFRDKNRDGKMDKEETKDWI R E Q D K N 0 1 0 1 0 1 2 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 9 1 1196.5826 O43852 O43852 235 243 CALU Calumenin yes yes 2 0.010141 136.57 By MS/MS 7 0 1 1 1391300 1391300 0 3859 231 4007 9366 6679 6679 1 24863 0 EQGNIEEAVR PTHADSLNNLANIKREQGNIEEAVRLYRKA ANIKREQGNIEEAVRLYRKALEVFPEFAAA R E Q V R L 1 1 1 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 10 0 1143.552 O15294 O15294 339 348 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.0013989 127.68 By MS/MS 4 0 1 1 913360 913360 0 3860 167 4008 9367 6680 6680 1 24934 0 EQGQAPITPQQGQALAK KKDLRAQPDTLRRLKEQGQAPITPQQGQAL GQAPITPQQGQALAKQIHAVRYLECSALQQ K E Q A K Q 3 0 0 0 0 5 1 2 0 1 1 1 0 0 2 0 1 0 0 0 0 0 17 0 1763.9166 P84095 P84095 131 147 RHOG Rho-related GTP-binding protein RhoG yes yes 2 3.2532E-11 174.72 By MS/MS 9 0 1 1 497150 497150 0 3861 1217 4009 9368 6681 6681 1 285320 0 EQGVLSFWR KQYKGIIDCVVRIPKEQGVLSFWRGNLANV VVRIPKEQGVLSFWRGNLANVIRYFPTQAL K E Q W R G 0 1 0 0 0 1 1 1 0 0 1 0 0 1 0 1 0 1 0 1 0 0 9 0 1120.5665 P05141;P12236 P05141 64 72 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 2.0477E-13 253.05 By MS/MS By MS/MS 5.73 2.83 1 1 1 1 1 1 1 2 1 1 10 1 61556000 61269000 286960 3862 469;563 4010 9369;9370;9371;9372;9373;9374;9375;9376;9377;9378;9379 6682;6683;6684;6685;6686;6687;6688;6689;6690;6691;6692;6693 6691 12 7276000 2448200 EQGVTFPSGDIQEQLIR YATILNAGTNTDGFKEQGVTFPSGDIQEQL GVTFPSGDIQEQLIRSLYQSAGVAPESFEY K E Q I R S 0 1 0 1 0 3 2 2 0 2 1 0 0 1 1 1 1 0 0 1 0 0 17 0 1915.964 P49327 P49327 258 274 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.8445E-07 182.02 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 6198700 6198700 0 3863 915 4011 9380;9381;9382;9383;9384;9385 6694;6695;6696;6697 6695 4 214270 0 EQIDIFEGIK DIEEVAASNPELIFKEQIDIFEGIKDSQAQ ELIFKEQIDIFEGIKDSQAQRMAENLGFVG K E Q I K D 0 0 0 1 0 1 2 1 0 3 0 1 0 1 0 0 0 0 0 0 0 0 10 0 1190.6183 Q96I99 Q96I99 191 200 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.051972 78.516 By MS/MS 7 0 1 1 431000 431000 0 3864 2200 4012 9386 6698 6698 1 7702 0 EQIDNLATELCR DSHVHAVRESQVELREQIDNLATELCRINE ELREQIDNLATELCRINEDQKVALDLDPYV R E Q C R I 1 1 1 1 1 1 2 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1460.6929 O95295 O95295 56 67 SNAPIN SNARE-associated protein Snapin yes yes 2 9.3833E-33 252.97 By MS/MS 10 0 1 1 457650 457650 0 3865 382 4013 9387 6699 6699 1 486440 0 EQISDIDDAVR RKGISLNPEQWSQLKEQISDIDDAVRKL__ SQLKEQISDIDDAVRKL_____________ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.00049801 142.83 By MS/MS 10 0 1 1 869400 869400 0 3866 1010 4014 9388 6700 6700 1 924080 0 EQISLYPEVK PSVAPRHPSTNSLLREQISLYPEVKGEIAR NSLLREQISLYPEVKGEIARKDEKLLSFLK R E Q V K G 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 10 0 1204.634 Q9P032 Q9P032 42 51 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 2.6298E-07 192.26 By MS/MS 9.5 0.5 1 1 2 9937100 9937100 0 3867 2722 4015 9389;9390 6701;6702 6701 2 5802800 0 EQISLYPEVKGEIAR PSVAPRHPSTNSLLREQISLYPEVKGEIAR EQISLYPEVKGEIARKDEKLLSFLKDVYVD R E Q A R K 1 1 0 0 0 1 3 1 0 2 1 1 0 0 1 1 0 0 1 1 0 0 15 1 1730.9203 Q9P032 Q9P032 42 56 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 3 0.0070543 83.823 By MS/MS 9 0 1 1 1109300 1109300 0 3868 2722 4016 9391 6703 6703 1 636660 0 EQIVPKPEEEVAQK YMSSPCHIEMILTEKEQIVPKPEEEVAQKK KEQIVPKPEEEVAQKKKISQKKLKKQKLMA K E Q Q K K 1 0 0 0 0 2 4 0 0 1 0 2 0 0 2 0 0 0 0 2 0 0 14 1 1622.8516 P18621 P18621 154 167 RPL17 60S ribosomal protein L17 yes yes 2 0.0046123 130.56 By MS/MS 9 0 1 1 309050 309050 0 3869 624 4017 9392 6704 6704 1 177370 0 EQLAALKK REQAEEERYFRAQSREQLAALKKHHEEEIV YFRAQSREQLAALKKHHEEEIVHHKKEIER R E Q K K H 2 0 0 0 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 1 899.54402 Q9UII2 Q9UII2 65 72 ATPIF1 ATPase inhibitor, mitochondrial yes yes 2 0.0168 139.97 By MS/MS By matching 10 0 2 1 1 1214800 1183200 31622 3870 2792 4018 9393;9394 6705 6705 1 1257600 811090 EQLAIAEFAR LSIYLENYATSMGSREQLAIAEFARSLLVI SMGSREQLAIAEFARSLLVIPNTLAVNAAQ R E Q A R S 3 1 0 0 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 10 0 1146.6033 P17987 P17987 434 443 TCP1 T-complex protein 1 subunit alpha yes yes 2 7.5821E-23 251.56 By MS/MS By MS/MS 6 2.83 1 1 1 2 1 1 1 1 8 1 238050000 237870000 184150 3871 619 4019 9395;9396;9397;9398;9399;9400;9401;9402;9403 6706;6707;6708;6709;6710;6711;6712;6713;6714;6715 6711 10 4919200 564780 EQLAQAVAR PPSVNRTEIVFTGEKEQLAQAVARIKKIYE VFTGEKEQLAQAVARIKKIYEEKKKKTTTI K E Q A R I 3 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 984.53524 Q00341 Q00341 275 283 HDLBP Vigilin yes yes 2 0.00032296 157.33 By MS/MS 3 0 1 1 1462100 1462100 0 3872 1231 4020 9404 6716 6716 1 38167 0 EQLIIPQVPLFNILAK LTLDLPTAPLYKDEKEQLIIPQVPLFNILA QLIIPQVPLFNILAKFNGITEKEYKTYKEN K E Q A K F 1 0 1 0 0 2 1 0 0 3 3 1 0 1 2 0 0 0 0 1 0 0 16 0 1835.0921 Q53GS9 Q53GS9 406 421 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 2 0.010798 91.549 By MS/MS 6 0 1 1 84125 84125 0 3873 1585 4021 9405 6717 6717 1 656.01 0 EQLLQSNPVLEAFGNAK VAAVCGKGAEVNQVKEQLLQSNPVLEAFGN LLQSNPVLEAFGNAKTVRNDNSSRFGKYMD K E Q A K T 2 0 2 0 0 2 2 1 0 0 3 1 0 1 1 1 0 0 0 1 0 0 17 0 1856.9632 O43795;Q9UBC5 O43795 140 156 MYO1B;MYO1A Unconventional myosin-Ib;Unconventional myosin-Ia yes no 2 0.0043467 107.39 By MS/MS 3.5 0.5 1 1 2 868970 868970 0 3874 223 4022 9406;9407 6718;6719;6720 6719 3 23645 0 EQLQTEQDAPAATR QNIHPENQELVRVLREQLQTEQDAPAATRQ REQLQTEQDAPAATRQQFYTDMYCPICLHQ R E Q T R Q 3 1 0 1 0 3 2 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 14 0 1556.7431 Q96K19 Q96K19 65 78 RNF170 E3 ubiquitin-protein ligase RNF170 yes yes 2 1.0653E-18 230.81 By MS/MS 9 0 1 1 306030 306030 0 3875 2214 4023 9408 6721 6721 1 175640 0 EQLWLANEGLITR EIQSSISGVTAAYNREQLWLANEGLITRLQ NREQLWLANEGLITRLQARCRGYLVRQEFR R E Q T R L 1 1 1 0 0 1 2 1 0 1 3 0 0 0 0 0 1 1 0 0 0 0 13 0 1541.8202 P46940 P46940 739 751 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 1.0762E-11 241.35 By MS/MS 3 0 1 1 259120 259120 0 3876 892 4024 9409 6722 6722 1 6764.2 0 EQNIVFNAETYSNLIK LNQKKGAYDIFLNAKEQNIVFNAETYSNLI QNIVFNAETYSNLIKLLMSEDYFTQAMEVK K E Q I K L 1 0 3 0 0 1 2 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 16 0 1881.9472 P42704 P42704 1060 1075 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 2.2237E-92 335.1 By MS/MS 3.33 0.471 2 1 3 3404000 3404000 0 3877 854 4025 9410;9411;9412 6723;6724 6723 2 89000 0 EQNKPDSSPLYIQNPFETSLNISK NFAFDKNSINIRQGREQNKPDSSPLYIQNP LYIQNPFETSLNISKNVSQSQLQKFVDLAR R E Q S K N 0 0 3 1 0 2 2 0 0 2 2 2 0 1 3 4 1 0 1 0 0 0 24 1 2748.3606 Q9NVV4 Q9NVV4 465 488 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 3 5.4365E-08 121.91 By MS/MS 6 0 1 1 4226800 4226800 0 3878 2663 4026 9413 6725 6725 1 32961 0 EQNYSDDVLANMISEPR VAEEIQDEVDELLQKEQNYSDDVLANMISE NYSDDVLANMISEPRISYGNDALMPSLTET K E Q P R I 1 1 2 2 0 1 2 0 0 1 1 0 1 0 1 2 0 0 1 1 0 0 17 0 1979.8895 P05067 P05067 569 585 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes yes 2 1.8541E-18 255.08 By MS/MS 3.5 0.5 1 1 2 357250 357250 0 3879 465 4027 9414;9415 6726 6726 1 9658 0 EQPEKEPELQQYVPQLQNNTILR LKLCERVTKVLNWVREQPEKEPELQQYVPQ LQQYVPQLQNNTILRLLQQVSQIYQSIEFS R E Q L R L 0 1 2 0 0 5 4 0 0 1 3 1 0 0 3 0 1 0 1 1 0 0 23 1 2793.4297 Q14152 Q14152 416 438 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 7.695E-09 137.86 By MS/MS 3.5 0.5 1 1 2 1414400 1414400 0 3880 1409 4028 9416;9417 6727 6727 1 37152 0 EQPVFAMTGLR GETVPLDVLQIKGEKEQPVFAMTGLRWGSF KGEKEQPVFAMTGLRWGSFRDAGVKVSKYW K E Q L R W 1 1 0 0 0 1 1 1 0 0 1 0 1 1 1 0 1 0 0 1 0 0 11 0 1247.6332 Q53H12 Q53H12 200 210 AGK Acylglycerol kinase, mitochondrial yes yes 2 1.9849E-05 172.56 By MS/MS 6.67 0.471 1 2 3 8861700 8861700 0 3881 1587 4029;4030 9418;9419;9420 6728;6729 6728 1189 2 155630 0 EQPWPLPVQMELGK PRQYWEELGAPEALREQPWPLPVQMELGKL REQPWPLPVQMELGKLLAEMLVQATQMPCS R E Q G K L 0 0 0 0 0 2 2 1 0 0 2 1 1 0 3 0 0 1 0 1 0 0 14 0 1650.844 O00411 O00411 564 577 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0035089 103.44 By MS/MS 3.5 0.5 1 1 2 689120 689120 0 3882 92 4031 9421;9422 6730;6731 6730 63 2 18099 0 EQQIVIQSSGGLSK NGIVHVSAKDKGTGREQQIVIQSSGGLSKD REQQIVIQSSGGLSKDDIENMVKNAEKYAE R E Q S K D 0 0 0 0 0 3 1 2 0 2 1 1 0 0 0 3 0 0 0 1 0 0 14 0 1472.7835 P38646 P38646 542 555 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.4241E-25 237.41 By MS/MS 5.5 0.5 1 1 2 4034600 4034600 0 3883 820 4032 9423;9424 6732 6732 1 146060 0 EQQLAEIEAR ALVLGPLKSVQELRREQQLAEIEARRQERE QELRREQQLAEIEARRQEREKNGNEEGEER R E Q A R R 2 1 0 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1185.599 Q15155;P69849;Q5JPE7 Q15155 708 717 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 0.00091579 140.07 By MS/MS By matching 2.6 1.02 1 1 2 1 4 1 2003800 1979600 24207 3884 1190 4033 9425;9426;9427;9428;9429 6733;6734;6735 6734 3 73582 34694 EQQLPVNEETLFQK FEAEEKLAEWVLTQREQQLPVNEETLFQKA REQQLPVNEETLFQKATKIGRSLEGGFKIS R E Q Q K A 0 0 1 0 0 3 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 14 0 1701.8574 Q7Z3K3 Q7Z3K3 1040 1053 POGZ Pogo transposable element with ZNF domain yes yes 2 6.3543E-12 205.02 By MS/MS 3 0 1 1 1034200 1034200 0 3885 1785 4034 9430 6736 6736 1 26997 0 EQQQREQAKQEYQAQK NLQQWHLDLVQLIQREQQQREQAKQEYQAQ QQQREQAKQEYQAQKAAKASA_________ R E Q Q K A 2 1 0 0 0 7 3 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 16 2 2018.977 Q92552 Q92552 393 408 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 3 3.0801E-05 137.93 By MS/MS 7 0 1 1 730140 730140 0 3886 2059 4035 9431 6737 6737 1 13048 0 EQSILELGSLLAK KRDIQENDEEAVQVKEQSILELGSLLAKTG VKEQSILELGSLLAKTGQAAELGGLLKYVR K E Q A K T 1 0 0 0 0 1 2 1 0 1 4 1 0 0 0 2 0 0 0 0 0 0 13 0 1399.7922 O00231 O00231 47 59 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 6.8948E-26 248.98 By MS/MS 7 0.816 1 1 1 3 6477500 6477500 0 3887 80 4036 9432;9433;9434 6738;6739;6740;6741 6739 4 112720 0 EQSQLTATQTR SQQRQQIAEIEKQTKEQSQLTATQTRTVNK KQTKEQSQLTATQTRTVNKHGDEIITSTTS K E Q T R T 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 1 3 0 0 0 0 0 11 0 1261.6262 Q6P2Q9 Q6P2Q9 2035 2045 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 8.8896E-07 194.12 By MS/MS 2 0.816 1 1 1 3 1292200 1292200 0 3888 1706 4037 9435;9436;9437 6742;6743;6744 6743 3 49969 0 EQTAQAIANTAR HGVRCLSSEHAVIVKEQTAQAIANTARAYE IVKEQTAQAIANTARAYEKSGVEAALSEVM K E Q A R A 4 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 12 0 1272.6422 Q96RU2 Q96RU2 744 755 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 2 0.00033826 146.16 By MS/MS 3.5 0.5 1 1 2 458170 458170 0 3889 2251 4038 9438;9439 6745 6745 1 12131 0 EQTDQTQAQELHR RIHTTAEKYREYEAREQTDQTQAQELHRSQ AREQTDQTQAQELHRSQDRDFETMAKLHIP R E Q H R S 1 1 0 1 0 4 2 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 13 0 1582.7336 A6NJ78 A6NJ78 47 59 METTL15 Probable methyltransferase-like protein 15 yes yes 2 0.041392 86.344 By MS/MS 7 0 1 1 508990 508990 0 3890 24 4039 9440 6746 6746 1 9095.7 0 EQTEGEYSSLEHESAR GYMTRHNNLDLVIIREQTEGEYSSLEHESA QTEGEYSSLEHESARGVIECLKIVTRAKSQ R E Q A R G 1 1 0 0 0 1 5 1 1 0 1 0 0 0 0 3 1 0 1 0 0 0 16 0 1850.7919 O43837 O43837 165 180 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2;3 1.1958E-06 152.16 By MS/MS 7.33 0.471 2 1 3 18631000 18631000 0 3891 230 4040 9441;9442;9443 6747;6748 6748 2 348010 0 EQTQDLIVK SNCCQDMTSRLQAAKEQTQDLIVKTTKLQS RLQAAKEQTQDLIVKTTKLQSESQKLEIRA K E Q V K T 0 0 0 1 0 2 1 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1072.5764 Q9Y2V7 Q9Y2V7 127 135 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.0063188 112.84 By MS/MS 4.5 0.5 1 1 2 1569400 1569400 0 3892 2903 4041 9444;9445 6749 6749 1 59752 0 EQVANSAFVER KETQKSIYYITGESKEQVANSAFVERVRKR GESKEQVANSAFVERVRKRGFEVVYMTEPI K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 6.6179E-16 215.72 By MS/MS By MS/MS 5.22 2.48 1 1 1 2 1 1 1 1 8 1 91920000 91741000 179410 3893 501 4042 9446;9447;9448;9449;9450;9451;9452;9453;9454 6750;6751;6752;6753;6754;6755;6756;6757 6751 8 3119700 530870 EQVPGFTPR AQIRARLKNQVTQLKEQVPGFTPRLAILQV QVTQLKEQVPGFTPRLAILQVGNRDDSNLY K E Q P R L 0 1 0 0 0 1 1 1 0 0 0 0 0 1 2 0 1 0 0 1 0 0 9 0 1029.5243 P11586 P11586 29 37 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00092964 143.7 By MS/MS 4 0 1 1 6243900 6243900 0 3894 556 4043 9455 6758 6758 1 170450 0 EQVSPLETTLEK STEVQSLYREIKDAKEQVSPLETTLEKFQQ DAKEQVSPLETTLEKFQQEKEELINKKNTS K E Q E K F 0 0 0 0 0 1 3 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 12 0 1372.7086 Q92878 Q92878 910 921 RAD50 DNA repair protein RAD50 yes yes 2 0.0055676 103.34 By MS/MS 3.5 0.5 1 1 2 602140 602140 0 3895 2083 4044 9456;9457 6759;6760 6760 2 15846 0 EQYGSVDQYAR VRIRSAAALSVPGKREQYGSVDQYARIWNA PGKREQYGSVDQYARIWNALVTALQKSEDT R E Q A R I 1 1 0 1 0 2 1 1 0 0 0 0 0 0 0 1 0 0 2 1 0 0 11 0 1314.584 Q6AI08 Q6AI08 1031 1041 HEATR6 HEAT repeat-containing protein 6 yes yes 2 0.0017986 122.96 By MS/MS 4 0 1 1 636990 636990 0 3896 1676 4045 9458 6761 6761 1 17389 0 EQYLELVSAALR LLSHHRRALRLQVSREQYLELVSAALRRPG VSREQYLELVSAALRRPGPSLVLYMVDLLD R E Q L R R 2 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 1 1 0 0 12 0 1390.7456 Q8NC60 Q8NC60 199 210 NOA1 Nitric oxide-associated protein 1 yes yes 2 4.5047E-17 229.68 By MS/MS 5 0 1 1 311670 311670 0 3897 1951 4046 9459 6762 6762 1 12811 0 EQYLIQGSR LVVGHNVSFDRAHIREQYLIQGSRMRFLDT DRAHIREQYLIQGSRMRFLDTMSMHMAISG R E Q S R M 0 1 0 0 0 2 1 1 0 1 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1092.5564 P54098 P54098 280 288 POLG DNA polymerase subunit gamma-1 yes yes 2 0.0087415 113.62 By MS/MS 3.5 0.5 1 1 2 742490 742490 0 3898 1011 4047 9460;9461 6763 6763 1 19504 0 ERELQHAALGGTATR KQEELNRKAEELDRRERELQHAALGGTATR ERELQHAALGGTATRQNNWPPLPSFCPVQP R E R T R Q 3 2 0 0 0 1 2 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 15 1 1608.8332 O14828 O14828 117 131 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 3 0.006319 86.777 By MS/MS By matching 5.67 3.3 1 2 2 1 2921700 2908000 13642 3899 130 4048 9462;9463;9464 6764;6765 6765 2 188210 116380 EREVLQLQEEVK QARKAEEVQAWAQRKEREVLQLQEEVKNFI QRKEREVLQLQEEVKNFITRENLEARVEAA K E R V K N 0 1 0 0 0 2 4 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 12 1 1498.7991 Q9BYN8 Q9BYN8 154 165 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 3.7981E-23 275.48 By MS/MS 9 0 1 1 677900 677900 0 3900 2417 4049 9465 6766 6766 1 389050 0 ERHDAIFR RRDDNSAANNSANEKERHDAIFRKVRGILN NNSANEKERHDAIFRKVRGILNKLTPEKFD K E R F R K 1 2 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 8 1 1042.5308 P78344 P78344 72 79 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 3 0.028046 78.149 By MS/MS 4 0 1 1 642360 642360 0 3901 1192 4050 9466 6767 6767 1 17536 0 ERHPGSFDVVHVK TGGANLGRIGVITNRERHPGSFDVVHVKDA NRERHPGSFDVVHVKDANGNSFATRLSNIF R E R V K D 0 1 0 1 0 0 1 1 2 0 0 1 0 1 1 1 0 0 0 3 0 0 13 1 1505.7739 P62701;P22090 P62701 199 211 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 4 0.012857 78.287 By MS/MS By matching 8 0 2 1 1 4074100 4036700 37483 3902 1140 4051 9467;9468 6768 6768 1 266300 319780 ERLEQIK RILQEHEQIKKKTVRERLEQIKKTELGAKA QIKKKTVRERLEQIKKTELGAKAFKDIDIE R E R I K K 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 1 914.51853 Q14152 Q14152 638 644 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.014193 107.32 By MS/MS 3 0.816 1 1 1 3 387240 387240 0 3903 1409 4052 9469;9470;9471 6769 6769 1 10598 0 ERLEQIKK RILQEHEQIKKKTVRERLEQIKKTELGAKA IKKKTVRERLEQIKKTELGAKAFKDIDIED R E R K K T 0 1 0 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 8 2 1042.6135 Q14152 Q14152 638 645 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00033242 193.86 By MS/MS By matching 3.6 0.49 2 3 4 1 6898600 6887100 11491 3904 1409 4053 9472;9473;9474;9475;9476 6770;6771;6772 6770 3 180640 24012 ERPHLAAK QFQRVATTTFITLSRERPHLAAKYLLQPVL TFITLSRERPHLAAKYLLQPVLAPLHRCLN R E R A K Y 2 1 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 8 1 920.5192 Q9C0B7 Q9C0B7 407 414 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 3 0.0041738 113.7 By MS/MS 4 0 1 1 0 0 0 3905 2432 4054 9477 6773 6773 1 0 0 ERPPDHQHSAQVK IKMKIALRVLHLEKRERPPDHQHSAQVKRP KRERPPDHQHSAQVKRPSVSKEGRKTSIKS R E R V K R 1 1 0 1 0 2 1 0 2 0 0 1 0 0 2 1 0 0 0 1 0 0 13 1 1527.7542 A0FGR8 A0FGR8 661 673 ESYT2 Extended synaptotagmin-2 yes yes 3 0.029503 67.019 By MS/MS 4 0 1 1 243390 243390 0 3906 6 4055 9478 6774 6774 1 6644.2 0 ERPPEEVAAR PTPALSEEASSSSIRERPPEEVAARLAQQE SSSIRERPPEEVAARLAQQEKQEQVKIESL R E R A R L 2 2 0 0 0 0 3 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 10 1 1152.5887 Q16891 Q16891 196 205 IMMT MICOS complex subunit MIC60 yes yes 2 0.0055758 134.23 By MS/MS By matching 5.33 0.471 2 1 2 1 825010 806060 18951 3907 1554 4056 9479;9480;9481 6775 6775 1 24496 56075 ERPQVELTFEETERR IEDFITPLKFLDKARERPQVELTFEETERR ERPQVELTFEETERRALLLKKWSLYKQQER R E R R R A 0 3 0 0 0 1 5 0 0 0 1 0 0 1 1 0 2 0 0 1 0 0 15 2 1917.9545 Q9NQ50 Q9NQ50 100 114 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 3 0.0036352 103.3 By MS/MS 9 0 1 1 1143800 1143800 0 3908 2585 4057 9482 6776 6776 1 656450 0 ERPSQPEGLR ATKRSFSKEVEERSRERPSQPEGLRKAASL EERSRERPSQPEGLRKAASLTEDRDRGRDA R E R L R K 0 2 0 0 0 1 2 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 10 1 1167.5996 Q04637 Q04637 1196 1205 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.039106 96.171 By MS/MS 2 0 1 1 2199400 2199400 0 3909 1264 4058 9483 6777 6777 1 109320 0 ERPSQPEGLRK ATKRSFSKEVEERSRERPSQPEGLRKAASL ERSRERPSQPEGLRKAASLTEDRDRGRDAV R E R R K A 0 2 0 0 0 1 2 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 2 1295.6946 Q04637 Q04637 1196 1206 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.0001315 155.26 By MS/MS By matching 3.56 1.95 1 3 1 1 1 1 1 8 1 14881000 14867000 14468 3910 1264 4059 9484;9485;9486;9487;9488;9489;9490;9491;9492 6778;6779;6780;6781;6782 6782 5 643720 12180 ERPTPSLNNNCTTSEDSLVLYNR TKVEATKNETSAPFKERPTPSLNNNCTTSE NNCTTSEDSLVLYNRVAVQGDVVRELKAKK K E R N R V 0 2 4 1 1 0 2 0 0 0 3 0 0 0 2 3 3 0 1 1 0 0 23 1 2679.2559 P07814 P07814 734 756 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 4.948E-23 166.59 By MS/MS 3.5 0.5 1 1 2 5516200 5516200 0 3911 493 4060 9493;9494 6783 6783 1 145000 0 ERSQMLLSR MNKLKNNKEYLEFRRERSQMLLSRRNQLLL YLEFRRERSQMLLSRRNQLLLEFSFWNEPQ R E R S R R 0 2 0 0 0 1 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 9 1 1118.5866 Q9BPW8 Q9BPW8 154 162 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.048528 112.3 By MS/MS 8 0 1 1 763910 763910 0 3912 2301 4061 9495 6784 6784 1 50395 0 ERVEAGDVIYIEANSGAVKR KQLKLDPSIFESLQKERVEAGDVIYIEANS GDVIYIEANSGAVKRQGRCDTYATEFDLEA K E R K R Q 3 2 1 1 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 3 0 0 20 2 2175.1284 Q9Y265 Q9Y265 183 202 RUVBL1 RuvB-like 1 yes yes 3 0.00023165 114.88 By MS/MS 6 0 1 1 6344900 6344900 0 3913 2870 4062 9496 6785 6785 1 49478 0 ESATADAGYAILEK NSFQPISSLRDDERRESATADAGYAILEKK RESATADAGYAILEKKGALAERQHTSMDLP R E S E K K 4 0 0 1 0 0 2 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 14 0 1437.6987 P98175 P98175 686 699 RBM10 RNA-binding protein 10 yes yes 2 1.8994E-05 199.12 By MS/MS By MS/MS 3.67 0.471 1 2 1 2 975040 667140 307910 3914 1225 4063 9497;9498;9499 6786;6787;6788 6788 3 18212 617130 ESCLEAYTGIVQGLK DKSDYDMVDYLNELRESCLEAYTGIVQGLK ESCLEAYTGIVQGLKGDQENVHPDVMLVQP R E S L K G 1 0 0 0 1 1 2 2 0 1 2 1 0 0 0 1 1 0 1 1 0 0 15 0 1666.8236 Q14974 Q14974 763 777 KPNB1 Importin subunit beta-1 yes yes 2 3.1205E-38 258.01 By MS/MS 4.5 0.5 1 1 2 1215800 1215800 0 3915 1452 4064 9500;9501 6789 6789 1 34389 0 ESDLPSAILQTSGVSEFTK GRDRKKDKQHLKRKKESDLPSAILQTSGVS PSAILQTSGVSEFTKKRSKLVLPAPQISDA K E S T K K 1 0 0 1 0 1 2 1 0 1 2 1 0 1 1 4 2 0 0 1 0 0 19 0 2008.0001 Q99459 Q99459 272 290 CDC5L Cell division cycle 5-like protein yes yes 2 7.1197E-12 173.71 By MS/MS 4 0 1 1 376350 376350 0 3916 2267 4065 9502 6790;6791 6790 2 10274 0 ESDTGLAPPALWDLAADK IQQLLKKINELTGIKESDTGLAPPALWDLA TGLAPPALWDLAADKQTLQSEQPLQVARCT K E S D K Q 4 0 0 3 0 0 1 1 0 0 3 1 0 0 2 1 1 1 0 0 0 0 18 0 1868.9156 P35998 P35998 67 84 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.04627 62.528 By MS/MS 6.5 0.5 1 1 2 396710 396710 0 3917 801 4066 9503;9504 6792 6792 1 4479.7 0 ESDVGFIPTSGLSGENLITR ITGKLGHFLKQAGFKESDVGFIPTSGLSGE FIPTSGLSGENLITRSQSSELTKWYKGLCL K E S T R S 0 1 1 1 0 0 2 3 0 2 2 0 0 1 1 3 2 0 0 1 0 0 20 0 2091.0484 Q9Y450 Q9Y450 436 455 HBS1L HBS1-like protein yes yes 2 0.00040909 113.53 By MS/MS 2.75 1.48 1 1 1 1 4 590650 590650 0 3918 2945 4067 9505;9506;9507;9508 6793;6794;6795;6796 6794 4 22528 0 ESDYFTPQGEFR WMVRIAEGEHPKDIRESDYFTPQGEFRVDK DIRESDYFTPQGEFRVDKAGSPTLLNCLMY R E S F R V 0 1 0 1 0 1 2 1 0 0 0 0 0 2 1 1 1 0 1 0 0 0 12 0 1474.6365 Q8TCJ2 Q8TCJ2 692 703 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.0025652 118.23 By MS/MS 3 1.41 1 1 1 1 1 5 2075500 2075500 0 3919 1995 4068 9509;9510;9511;9512;9513 6797;6798 6797 2 85114 0 ESEAFVQR ASGTLLLLAPATRNRESEAFVQRLLWLRGR APATRNRESEAFVQRLLWLRGRGRLRYVNL R E S Q R L 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 8 0 964.46141 Q9BSF4 Q9BSF4 105 112 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.002028 157.21 By MS/MS 9 0.816 1 1 1 3 3753200 3753200 0 3920 2336 4069 9514;9515;9516 6799 6799 1 413620 0 ESEDFIVEQYK RYLLFARQFKPKISKESEDFIVEQYKHLRQ KISKESEDFIVEQYKHLRQRDGSGVTKSSW K E S Y K H 0 0 0 1 0 1 3 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 11 0 1385.6351 Q14566 Q14566 589 599 MCM6 DNA replication licensing factor MCM6 yes yes 2 4.1364E-16 222.28 By MS/MS 4.5 0.5 1 1 2 6125200 6125200 0 3921 1436 4070 9517;9518 6800 6800 1 176780 0 ESEGFEEHVPSDNS RYKEGRVILERALVRESEGFEEHVPSDNS_ RESEGFEEHVPSDNS_______________ R E S N S - 0 0 1 1 0 0 4 1 1 0 0 0 0 1 1 3 0 0 0 1 0 0 14 0 1561.6169 P62699 P62699 108 121 YPEL5 Protein yippee-like 5 yes yes 2 3.6062E-12 204.56 By MS/MS 10 0 1 1 561910 561910 0 3922 1139 4071 9519 6801 6801 1 597250 0 ESEITDEDIDGILER LQMIRHGATHVFASKESEITDEDIDGILER ESEITDEDIDGILERGAKKTAEMNEKLSKM K E S E R G 0 1 0 3 0 0 4 1 0 3 1 0 0 0 0 1 1 0 0 0 0 0 15 0 1732.8003 O60264 O60264 666 680 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 9.8134E-50 276.35 By MS/MS 3.5 0.5 1 1 2 2455100 2455100 0 3923 240 4072 9520;9521 6802 6802 1 64480 0 ESELTDEDITTILER LQMIRHGATHVFASKESELTDEDITTILER ESELTDEDITTILERGEKKTAEMNERLQKM K E S E R G 0 1 0 2 0 0 4 0 0 2 2 0 0 0 0 1 3 0 0 0 0 0 15 0 1762.8473 P28370 P28370 681 695 SMARCA1 Probable global transcription activator SNF2L1 yes yes 2 2.0408E-14 205.02 By MS/MS 3.5 0.5 1 1 2 382860 382860 0 3924 720 4073 9522;9523 6803 6803 1 10170 0 ESEMNVIAADMCTNARR NAVKLYCQNFAPSFKESEMNVIAADMCTNA EMNVIAADMCTNARRVRKRWLPKIKSMLPE K E S R R V 3 2 2 1 1 0 2 0 0 1 0 0 2 0 0 1 1 0 0 1 0 0 17 1 1966.8659 Q96BF6 Q96BF6 430 446 NACC2 Nucleus accumbens-associated protein 2 yes yes 2 0.015035 64.121 By MS/MS 3 1.41 1 1 1 1 1 5 576790 0 576790 3925 2127 4074 9524;9525;9526;9527;9528 6804 6804 1382;1383 1 0 1012700 ESEVLIGNLGDK KREEEEDFIRAAFGKESEVLIGNLGDKLIP FGKESEVLIGNLGDKLIPPQDILRDVSDLK K E S D K L 0 0 1 1 0 0 2 2 0 1 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1272.6561 Q96A65 Q96A65 682 693 EXOC4 Exocyst complex component 4 yes yes 2 0.0036329 112.94 By MS/MS 4 0 1 1 433330 433330 0 3926 2118 4075 9529 6805 6805 1 11830 0 ESFAEMNR LSMDEKVELYRIKFKESFAEMNRGSNEWKT LYRIKFKESFAEMNRGSNEWKTVVGGAMFF K E S N R G 1 1 1 0 0 0 2 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 8 0 982.41783 P13073 P13073 88 95 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.024687 101.28 By MS/MS 10 0 2 2 839960 839960 0 3927 571 4076;4077 9530;9531 6806;6807 6807 359 2 892790 0 ESFDPSAFLVPR NGRWIKSQKIVKFPRESFDPSAFLVPRDPA FPRESFDPSAFLVPRDPALCQHKPLTPQGD R E S P R D 1 1 0 1 0 0 1 0 0 0 1 0 0 2 2 2 0 0 0 1 0 0 12 0 1363.6772 Q8NFA0;P35125 Q8NFA0 1304 1315 USP32;USP6 Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 6 yes no 2 0.00019172 153.05 By MS/MS 3 0 1 1 159510 159510 0 3928 1968 4078 9532 6808 6808 1 4164.1 0 ESFESQFLADTER EDDAFAKGPTLTVYKESFESQFLADTERFY YKESFESQFLADTERFYTRESTEFLQQNPV K E S E R F 1 1 0 1 0 1 3 0 0 0 1 0 0 2 0 2 1 0 0 0 0 0 13 0 1557.6947 Q13616 Q13616 230 242 CUL1 Cullin-1 yes yes 2 3.364E-12 210.44 By MS/MS 4.5 0.5 1 1 2 728910 728910 0 3929 1387 4079 9533;9534 6809 6809 1 25414 0 ESFSLVQVQPGVDIIR MATHTLITGLEEYVRESFSLVQVQPGVDII SFSLVQVQPGVDIIRTNLEFLQEQFNSIAA R E S I R T 0 1 0 1 0 2 1 1 0 2 1 0 0 1 1 2 0 0 0 3 0 0 16 0 1785.9625 P46379 P46379 821 836 BAG6 Large proline-rich protein BAG6 yes yes 2 0.00038534 126.12 By MS/MS 3.5 0.5 1 1 2 812220 812220 0 3930 880 4080 9535;9536 6810 6810 1 21360 0 ESGDRNFAIGYYLK NEYVGFSNATFQSERESGDRNFAIGYYLKE RESGDRNFAIGYYLKEKKCFPEGTDMVGIL R E S L K E 1 1 1 1 0 0 1 2 0 1 1 1 0 1 0 1 0 0 2 0 0 0 14 1 1631.7944 O94925 O94925 383 396 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 0.0020635 155.53 By MS/MS 6 0 1 1 2037500 2037500 0 3931 359 4081 9537 6811 6811 1 15888 0 ESGEGQGGYAK QFKSLGAEPLEVDLKESGEGQGGYAKEMSK VDLKESGEGQGGYAKEMSKEFIEAEMKLFA K E S A K E 1 0 0 0 0 1 2 4 0 0 0 1 0 0 0 1 0 0 1 0 0 0 11 0 1081.4676 Q13423 Q13423 280 290 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.012585 96.034 By MS/MS 1.5 0.5 1 1 2 257910 257910 0 3932 1367 4082 9538;9539 6812 6812 1 12644 0 ESGSLSPEHGPVVVHCSAGIGR PESPASFLNFLFKVRESGSLSPEHGPVVVH EHGPVVVHCSAGIGRSGTFCLADTCLLLMD R E S G R S 1 1 0 0 1 0 2 4 2 1 1 0 0 0 2 4 0 0 0 3 0 0 22 0 2231.0753 P18031 P18031 200 221 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 3 9.668E-07 124.98 By MS/MS 6.5 0.5 1 1 2 12623000 12623000 0 3933 620 4083 9540;9541 6813 6813 1 103370 0 ESIESEIR DLTEICQRACKLAIRESIESEIRRERERQT ACKLAIRESIESEIRRERERQTNPSAMEVE R E S I R R 0 1 0 0 0 0 3 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 8 0 961.47164 P55072 P55072 701 708 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.014788 113.5 By MS/MS 4 0 1 1 1272300 1272300 0 3934 1026 4084 9542 6814 6814 1 34732 0 ESINFSILNK VVGRLKTGTPPRIAKESINFSILNKHIPDN PRIAKESINFSILNKHIPDNPSIPFSFTNE K E S N K H 0 0 2 0 0 0 1 0 0 2 1 1 0 1 0 2 0 0 0 0 0 0 10 0 1163.6186 Q9Y2Z2 Q9Y2Z2 246 255 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 4.3573E-08 195.05 By MS/MS 5 0 1 1 1054600 1054600 0 3935 2908 4085 9543 6815 6815 1 43347 0 ESISDVGFGMLK SHHHGVGKLRKQWLKESISDVGFGMLKSVK WLKESISDVGFGMLKSVKEYVDPNNIFGNR K E S L K S 0 0 0 1 0 0 1 2 0 1 1 1 1 1 0 2 0 0 0 1 0 0 12 0 1281.6275 O00116 O00116 629 640 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 2.2366E-07 211.27 By MS/MS 5 0 2 2 3101900 3101900 0 3936 67 4086;4087 9544;9545 6816;6817 6817 40 2 127500 0 ESIVDVEGVVR HASKQMVKFAANINKESIVDVEGVVRKVNQ NINKESIVDVEGVVRKVNQKIGSCTQQDVE K E S V R K 0 1 0 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 0 4 0 0 11 0 1200.635 P14868 P14868 111 121 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 6.444E-07 214.83 By MS/MS By matching 4.33 2.36 1 2 2 1 6786600 6760300 26251 3937 594 4088 9546;9547;9548 6818;6819 6819 2 66841 80511 ESKEEETSIDVAGKPNEVTK YRLLAKEQKANEQKKESKEEETSIDVAGKP ETSIDVAGKPNEVTKAAESPDQKDTDGGPK K E S T K A 1 0 1 1 0 0 5 1 0 1 0 3 0 0 1 2 2 0 0 2 0 0 20 2 2189.0699 P53985 P53985 460 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3;4 5.6466E-06 136.33 By MS/MS 3.91 2.23 2 2 2 1 2 2 11 17824000 17824000 0 3938 1008 4089 9549;9550;9551;9552;9553;9554;9555;9556;9557;9558;9559 6820;6821;6822;6823;6824;6825;6826;6827 6820 8 546330 0 ESLCQAALGLILK QHHKQLLLSRKAAAKESLCQAALGLILKEK AKESLCQAALGLILKEKAMTDTFTLQAHDQ K E S L K E 2 0 0 0 1 1 1 1 0 1 4 1 0 0 0 1 0 0 0 0 0 0 13 0 1414.7854 Q96RQ3 Q96RQ3 506 518 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 1.0437E-46 287.65 By MS/MS 6 0 1 1 240380 240380 0 3939 2249 4090 9560 6828 6828 1 1874.5 0 ESLDDLTNLVVK AYYSSNLMAVCVLGRESLDDLTNLVVKLFS LGRESLDDLTNLVVKLFSEVENKNVPLPEF R E S V K L 0 0 1 2 0 0 1 0 0 0 3 1 0 0 0 1 1 0 0 2 0 0 12 0 1344.7137 P14735 P14735 262 273 IDE Insulin-degrading enzyme yes yes 2 1.0347E-17 232.41 By MS/MS 4 0 1 1 938230 938230 0 3940 592 4091 9561 6829 6829 1 25613 0 ESLEALLQR VWLRAAYFEKNHGTRESLEALLQRAVAHCP KNHGTRESLEALLQRAVAHCPKAEVLWLMG R E S Q R A 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 9 0 1057.5768 O94906 O94906 591 599 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 8.8214E-05 171.38 By MS/MS 4.5 0.5 1 1 2 1890700 1890700 0 3941 358 4092 9562;9563 6830 6830 1 53637 0 ESLHEVSK EVLRKKLGELTGTVKESLHEVSKSDLGRKI ELTGTVKESLHEVSKSDLGRKIKEGVEEAA K E S S K S 0 0 0 0 0 0 2 0 1 0 1 1 0 0 0 2 0 0 0 1 0 0 8 0 927.46616 O43615 O43615 131 138 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0082883 124.83 By MS/MS 7.5 0.5 1 1 2 6430800 6430800 0 3942 209 4093 9564;9565 6831 6831 1 132590 0 ESLHEVSKSDLGR EVLRKKLGELTGTVKESLHEVSKSDLGRKI VKESLHEVSKSDLGRKIKEGVEEAAKTAKQ K E S G R K 0 1 0 1 0 0 2 1 1 0 2 1 0 0 0 3 0 0 0 1 0 0 13 1 1455.7318 O43615 O43615 131 143 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 0.00030099 187.42 By MS/MS 7.33 0.471 2 1 3 7463000 7463000 0 3943 209 4094 9566;9567;9568 6832;6833 6833 2 147390 0 ESLKELSLAGNELGDEGAR TAKGCGDLCRVLRAKESLKELSLAGNELGD ELSLAGNELGDEGARLLCETLLEPGCQLES K E S A R L 2 1 1 1 0 0 4 3 0 0 4 1 0 0 0 2 0 0 0 0 0 0 19 1 1986.9858 P13489 P13489 284 302 RNH1 Ribonuclease inhibitor yes yes 2;3 4.6046E-24 238.02 By MS/MS 7 0 2 2 4362500 4362500 0 3944 574 4095 9569;9570 6834;6835 6835 2 77959 0 ESLLLQVR RICVQNSTFSATWNRESLLLQVRGSGGARL FSATWNRESLLLQVRGSGGARLSTKDPLPT R E S V R G 0 1 0 0 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 8 0 956.56548 Q9BZE1 Q9BZE1 216 223 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 4.2694E-05 196.98 By MS/MS By matching 7.75 0.829 2 1 1 3 1 5314800 5290000 24800 3945 2420 4096 9571;9572;9573;9574 6836 6836 1 161200 101810 ESLREVQLEELEAAR VRRRQCEEVARALGKESLREVQLEELEAAR ESLREVQLEELEAARDLVSKEGFRRARHVV K E S A R D 2 2 0 0 0 1 5 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 15 1 1770.9112 P51570 P51570 253 267 GALK1 Galactokinase yes yes 2;3 1.8657E-09 145.83 By MS/MS 7 0 2 2 1476500 1476500 0 3946 967 4097 9575;9576 6837;6838 6838 2 26385 0 ESLSAATAQAAER LMSLLNFLNNFQTAKESLSAATAQAAERAA AKESLSAATAQAAERAATSVKDLAQRSFRV K E S E R A 5 1 0 0 0 1 2 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 13 0 1303.6368 Q709C8 Q709C8 1212 1224 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 5.4389E-08 163.46 By MS/MS 1 0 1 1 0 0 0 3947 1749 4098 9577 6839 6839 1 0 0 ESLSTAAECVK GMFVDAFSKQVFDSKESLSTAAECVKVAKE FDSKESLSTAAECVKVAKEHCQQLGDIGLD K E S V K V 2 0 0 0 1 0 2 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1193.5598 Q8IYI6 Q8IYI6 513 523 EXOC8 Exocyst complex component 8 yes yes 2 0.0026667 117.53 By MS/MS 5 0 1 1 755860 755860 0 3948 1881 4099 9578 6840 6840 1 31069 0 ESLSYVVESIEK PTFQPHGCLCLYNSKESLSYVVESIEKSRE NSKESLSYVVESIEKSRESTLGRRDNHLVH K E S E K S 0 0 0 0 0 0 3 0 0 1 1 1 0 0 0 3 0 0 1 2 0 0 12 0 1381.6977 Q9NRY4 Q9NRY4 669 680 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2 0.0016988 156.16 By MS/MS 3 0 1 1 229050 229050 0 3949 2618 4100 9579 6841 6841 1 5979.3 0 ESLVVNYEDLAAR NVFKERISDMCKENRESLVVNYEDLAAREH NRESLVVNYEDLAAREHVLAYFLPEAPAEL R E S A R E 2 1 1 1 0 0 2 0 0 0 2 0 0 0 0 1 0 0 1 2 0 0 13 0 1477.7413 P49736 P49736 228 240 MCM2 DNA replication licensing factor MCM2 yes yes 2 1.2644E-34 255.52 By MS/MS 4 0.816 1 1 1 3 9850900 9850900 0 3950 928 4101 9580;9581;9582 6842;6843 6842 2 274950 0 ESMATGSIPITVR MDQDKVAKMYSDLRKESMATGSIPITVRHI RKESMATGSIPITVRHIESMIRMAEAHARI K E S V R H 1 1 0 0 0 0 1 1 0 2 0 0 1 0 1 2 2 0 0 1 0 0 13 0 1360.7021 P49736 P49736 753 765 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.0011202 123.51 By MS/MS 3.5 0.5 1 1 2 1517100 1517100 0 3951 928 4102 9583;9584 6844;6845 6845 692 2 40699 0 ESNTPAPSTQGLPDSWGIIAEPR ADSSSDYVNMDFTKRESNTPAPSTQGLPDS TQGLPDSWGIIAEPRQSAFSNYVNVEFGVP R E S P R Q 2 1 1 1 0 1 2 2 0 2 1 0 0 0 4 3 2 1 0 0 0 0 23 0 2422.1765 O14654 O14654 930 952 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.0282E-30 211.9 By MS/MS 4.29 1.03 2 2 2 1 7 3152400 3152400 0 3952 118 4103 9585;9586;9587;9588;9589;9590;9591 6846;6847;6848;6849 6847 4 81471 0 ESNYFGLSPEER KPDRERVEDFDHTSRESNYFGLSPEERREK TSRESNYFGLSPEERREKQAIEESRLLYEI R E S E R R 0 1 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 12 0 1426.6365 Q01804 Q01804 436 447 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0085417 120.86 By MS/MS By matching 3 0 2 1 1 471420 414380 57034 3953 1245 4104 9592;9593 6850 6850 0 10818 81742 ESPEKFQIEANFPR SQSLTVIHDFLFSLKESPEKFQIEANFPRR KESPEKFQIEANFPRRVLPCIPSEEWPNPP K E S P R R 1 1 1 0 0 1 3 0 0 1 0 1 0 2 2 1 0 0 0 0 0 0 14 1 1690.8315 Q96CS3 Q96CS3 396 409 FAF2 FAS-associated factor 2 yes yes 2 9.4345E-05 166.11 By MS/MS 6 0 1 1 3169900 3169900 0 3954 2140 4105 9594 6851 6851 1 24719 0 ESPESEGPIYEGLIL NKHFHNTLEHLRLRRESPESEGPIYEGLIL ESPESEGPIYEGLIL_______________ R E S I L - 0 0 0 0 0 0 4 2 0 2 2 0 0 0 2 2 0 0 1 0 0 0 15 0 1631.793 Q96QK1 Q96QK1 782 796 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.019785 94.692 By MS/MS 6 1.41 1 1 1 1 1 5 3571000 3571000 0 3955 2242 4106 9595;9596;9597;9598;9599 6852;6853 6852 2 135840 0 ESPNPPNPSGQCPICR GKTTIIEGRITATPKESPNPPNPSGQCPIC SPNPPNPSGQCPICRWNLKHKYNYDDVLLL K E S C R W 0 1 2 0 2 1 1 1 0 1 0 0 0 0 5 2 0 0 0 0 0 0 16 0 1808.7934 Q9NVS2 Q9NVS2 59 74 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 0.00010252 135.94 By MS/MS 9.5 0.5 1 1 2 1011100 1011100 0 3956 2660 4107 9600;9601 6854;6855;6856 6856 3 693880 0 ESQAKDVIEEYFK KVVGCSCVVVKDYGKESQAKDVIEEYFKCK GKESQAKDVIEEYFKCKK____________ K E S F K C 1 0 0 1 0 1 3 0 0 1 0 2 0 1 0 1 0 0 1 1 0 0 13 1 1584.7672 P25398 P25398 117 129 RPS12 40S ribosomal protein S12 yes yes 2 0.00037738 158.06 By MS/MS 10 0 1 1 1061900 1061900 0 3957 684 4108 9602 6857 6857 1 1128700 0 ESQDTSFTTLVER TETIAKLVKYMYDNRESQDTSFTTLVERVI NRESQDTSFTTLVERVIQQLEGAFALVFKS R E S E R V 0 1 0 1 0 1 2 0 0 0 1 0 0 1 0 2 3 0 0 1 0 0 13 0 1511.7104 Q06210 Q06210 164 176 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 1.564E-07 182.25 By MS/MS 5.5 0.5 1 1 2 8168900 8168900 0 3958 1274 4109 9603;9604 6858 6858 1 295940 0 ESQKVELSESR PQVHTPKTADSQETKESQKVELSESRLKAF QETKESQKVELSESRLKAFKVALLDVFREA K E S S R L 0 1 0 0 0 1 3 0 0 0 1 1 0 0 0 3 0 0 0 1 0 0 11 1 1290.6416 P25205 P25205 733 743 MCM3 DNA replication licensing factor MCM3 yes yes 2 7.1474E-06 178.54 By MS/MS 4 0 1 1 738870 738870 0 3959 683 4110 9605 6859 6859 1 20170 0 ESQLLLNVVSQLAK VIDGLNVAKMFPKVRESQLLLNVVSQLAKR RESQLLLNVVSQLAKRNLRLLVLGRKHMLR R E S A K R 1 0 1 0 0 2 1 0 0 0 4 1 0 0 0 2 0 0 0 2 0 0 14 0 1540.8825 O15091 O15091 422 435 KIAA0391 Mitochondrial ribonuclease P protein 3 yes yes 2 3.6041E-59 296.28 By MS/MS 6 0 1 1 2857400 2857400 0 3960 148 4111 9606 6860 6860 1 22282 0 ESQNSLDESLPFR DDIISDPDSHFPAWRESQNSLDESLPFRGS WRESQNSLDESLPFRGSGTAIKPLPSYENL R E S F R G 0 1 1 1 0 1 2 0 0 0 2 0 0 1 1 3 0 0 0 0 0 0 13 0 1520.7107 Q8IXW5 Q8IXW5 425 437 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 1.4856E-07 182.92 By MS/MS 5 0 1 1 1123200 1123200 0 3961 1875 4112 9607 6861 6861 1 46168 0 ESQQQHGLR EFGDSLSLEILQIIKESQQQHGLRHGDFQR ILQIIKESQQQHGLRHGDFQRYRGYCSRRQ K E S L R H 0 1 0 0 0 3 1 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1081.5265 Q9UHB9 Q9UHB9 68 76 SRP68 Signal recognition particle subunit SRP68 yes yes 2 1.8728E-05 175.91 By MS/MS 5 0 1 1 2078800 2078800 0 3962 2779 4113 9608 6862 6862 1 85445 0 ESQSPDTTIQR KPDEQGLQQILQLLKESQSPDTTIQRTVQQ QLLKESQSPDTTIQRTVQQKLEQLNQYPDF K E S Q R T 0 1 0 1 0 2 1 0 0 1 0 0 0 0 1 2 2 0 0 0 0 0 11 0 1260.5946 Q92973 Q92973 29 39 TNPO1 Transportin-1 yes yes 2 0.00051846 142 By MS/MS 4.5 0.5 1 1 2 6955500 6955500 0 3963 2093 4114 9609;9610 6863;6864 6863 2 204430 0 ESRPSEEREWDR REKEKAREESWGPPRESRPSEEREWDREKE PPRESRPSEEREWDREKERDRDNQDREEND R E S D R E 0 3 0 1 0 0 4 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 12 2 1574.7073 Q14152 Q14152 1194 1205 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.050128 67.456 By MS/MS 3 0 1 1 1652400 1652400 0 3964 1409 4115 9611 6865 6865 1 43137 0 ESSCLALNDLLR QDLVKNLTSNMWRVRESSCLALNDLLRGRP RVRESSCLALNDLLRGRPLDDIIDKLPEIW R E S L R G 1 1 1 1 1 0 1 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 12 0 1389.6922 Q5VYK3 Q5VYK3 1180 1191 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 1.9087E-05 190.57 By MS/MS 4 1.41 1 1 1 1 1 5 3870900 3870900 0 3965 1657 4116 9612;9613;9614;9615;9616 6866;6867 6867 2 99360 0 ESSDQPPTIPVEILQLEK LCELTIPLAIENFLRESSDQPPTIPVEILQ DQPPTIPVEILQLEKKLSEPVRVHNDDKLR R E S E K K 0 0 0 1 0 2 3 0 0 2 2 1 0 0 3 2 1 0 0 1 0 0 18 0 2022.0521 Q8NEC7 Q8NEC7 164 181 GSTCD Glutathione S-transferase C-terminal domain-containing protein yes yes 2 0.0067085 91.914 By MS/MS 5 0 1 1 121140 121140 0 3966 1965 4117 9617 6868 6868 1 4979.2 0 ESSGFPSR QAWTGEIFAQAFLGRESSGFPSRLCTPGEM AQAFLGRESSGFPSRLCTPGEMVKFLTAII R E S S R L 0 1 0 0 0 0 1 1 0 0 0 0 0 1 1 3 0 0 0 0 0 0 8 0 865.393 Q9BYJ1 Q9BYJ1 559 566 ALOXE3 Hydroperoxide isomerase ALOXE3 yes yes 2 0.0084118 124.37 By MS/MS 4 0 1 1 804670 804670 0 3967 2416 4118 9618 6869 6869 1 21966 0 ESSGLVLLSSCPQTASR GLREQELQVVRASGKESSGLVLLSSCPQTA SGLVLLSSCPQTASRLQKYFTHARRAQRPT K E S S R L 1 1 0 0 1 1 1 1 0 0 3 0 0 0 1 5 1 0 0 1 0 0 17 0 1790.8833 Q6P087 Q6P087 137 153 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 2.4049E-18 199.4 By MS/MS 8 0 1 1 1624500 1624500 0 3968 1697 4119 9619 6870 6870 1 107170 0 ESSLTEPVIVGLLK YHPQLAYCVVQFLEKESSLTEPVIVGLLKF KESSLTEPVIVGLLKFWPKTHSPKEVMFLN K E S L K F 0 0 0 0 0 0 2 1 0 1 3 1 0 0 1 2 1 0 0 2 0 0 14 0 1483.8498 Q14738 Q14738 354 367 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 2 0.0055444 101.66 By MS/MS 5 0 1 1 813490 813490 0 3969 1444 4120 9620 6871;6872 6872 2 33438 0 ESSNVVVTER PSSSLPTSLTIHHPRESSNVVVTERVIQPT IHHPRESSNVVVTERVIQPTSGMIGSLSMH R E S E R V 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 2 1 0 0 3 0 0 10 0 1118.5568 Q02413 Q02413 916 925 DSG1 Desmoglein-1 yes yes 2 0.00086962 128.91 By matching By MS/MS 3.25 0.829 1 1 2 1 3 545800 292710 253090 3970 1253 4121 9621;9622;9623;9624 6873;6874;6875 6874 3 7990.6 402210 ESSSEQYVPDVFYK CLLPCKDAPELGYAKESSSEQYVPDVFYKD KESSSEQYVPDVFYKDVDKFGNEITQLARP K E S Y K D 0 0 0 1 0 1 2 0 0 0 0 1 0 1 1 3 0 0 2 2 0 0 14 0 1676.757 Q8TAT6 Q8TAT6 414 427 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 7.747E-18 215.72 By MS/MS 5 0 1 1 1394200 1394200 0 3971 1984 4122 9625 6876 6876 1 57308 0 ESSTVFELKR LMIRRHKTTIFTDAKESSTVFELKRIVEGI FTDAKESSTVFELKRIVEGILKRPPDEQRL K E S K R I 0 1 0 0 0 0 2 0 0 0 1 1 0 1 0 2 1 0 0 1 0 0 10 1 1194.6245 Q15370 Q15370 20 29 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.018334 96.665 By MS/MS 10 0 1 1 473870 473870 0 3972 1492 4123 9626 6877 6877 1 503680 0 ESTEKGSPLGEVVEQGITR LNQIKVQEKYVWNKRESTEKGSPLGEVVEQ KGSPLGEVVEQGITRVRNATDAVGIVLKEL R E S T R V 0 1 0 0 0 1 4 3 0 1 1 1 0 0 1 2 2 0 0 2 0 0 19 1 2015.0171 P51398 P51398 214 232 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 8.0412E-12 176.44 By MS/MS 7.5 0.5 1 1 2 6502600 6502600 0 3973 963 4124 9627;9628 6878 6878 1 129580 0 ESTGAQVQVAGDMLPNSTER GSLIGKGGCKIKEIRESTGAQVQVAGDMLP QVQVAGDMLPNSTERAITIAGVPQSVTECV R E S E R A 2 1 1 1 0 2 2 2 0 0 1 0 1 0 1 2 2 0 0 2 0 0 20 0 2088.9746 P57721;Q15365;Q15366 Q15365 125 144 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 2;3 5.7604E-40 239.51 By MS/MS By matching 7.8 0.748 4 4 2 8 2 27228000 27158000 70768 3974 1490;1491;1055 4125;4126 9629;9630;9631;9632;9633;9634;9635;9636;9637;9638 6879;6880;6881;6882;6883;6884 6882 821 6 1064100 439600 ESTLHLVLR QLEDGRTLSDYNIQKESTLHLVLRLRGGAK DYNIQKESTLHLVLRLRGGAKKRKKKSYTT K E S L R L 0 1 0 0 0 0 1 0 1 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 1066.6135 P62979;P0CG47;P0CG48 P62979 64 72 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 2 0.00016052 166.68 By MS/MS 4.64 2.84 2 2 2 2 1 1 1 1 1 1 14 79484000 79484000 0 3975 1165 4127 9639;9640;9641;9642;9643;9644;9645;9646;9647;9648;9649;9650;9651;9652 6885;6886;6887;6888;6889;6890;6891;6892;6893;6894;6895;6896;6897 6892 13 3707100 0 ESVAPVLSVLTECAR LIFLEKRLHKTHRLKESVAPVLSVLTECAR ESVAPVLSVLTECARMHRPARKFLKAQVLP K E S A R M 2 1 0 0 1 0 2 0 0 0 2 0 0 0 1 2 1 0 0 3 0 0 15 0 1629.8396 Q9NPQ8 Q9NPQ8 329 343 RIC8A Synembryn-A yes yes 2 8.8231E-10 181.66 By MS/MS 5 0 1 1 765300 765300 0 3976 2584 4128 9653 6898 6898 1 31457 0 ESVDGQWVCISDVNK ILAVSGGDNKVTLWKESVDGQWVCISDVNK ESVDGQWVCISDVNKGQGSVSASVTEGQQN K E S N K G 0 0 1 2 1 1 1 1 0 1 0 1 0 0 0 2 0 1 0 3 0 0 15 0 1734.7883 P55735 P55735 291 305 SEC13 Protein SEC13 homolog yes yes 2 7.6481E-29 246.51 By MS/MS 8 0 1 1 553370 553370 0 3977 1033 4129 9654 6899 6899 1 36506 0 ESVDHLTIPSR ELEELSGAKISDLHRESVDHLTIPSRCGKG DLHRESVDHLTIPSRCGKGSLHRISEVFDC R E S S R C 0 1 0 1 0 0 1 0 1 1 1 0 0 0 1 2 1 0 0 1 0 0 11 0 1252.6412 P41252 P41252 501 511 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0026257 117.7 By MS/MS 3.5 0.5 1 1 2 3237600 3237600 0 3978 840 4130 9655;9656 6900 6900 1 84825 0 ESVEQQADSFK NLSLAVSDCFWKMVRESVEQQADSFKATRF KMVRESVEQQADSFKATRFNLETEWKNNYP R E S F K A 1 0 0 1 0 2 2 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 11 0 1266.5728 O60313 O60313 558 568 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0020692 144.77 By MS/MS 4.5 0.5 1 1 2 3563500 3563500 0 3979 244 4131 9657;9658 6901;6902 6902 2 113400 0 ESVFTVEGGHR LKLLLGAGAVAYGVRESVFTVEGGHRAIFF YGVRESVFTVEGGHRAIFFNRIGGVQQDTI R E S H R A 0 1 0 0 0 0 2 2 1 0 0 0 0 1 0 1 1 0 0 2 0 0 11 0 1216.5836 Q99623 Q99623 38 48 PHB2 Prohibitin-2 yes yes 2 5.5508E-07 185.81 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 21322000 20948000 374160 3980 2277 4132 9659;9660;9661;9662;9663 6903;6904 6904 2 1602000 3192100 ESVLQMMQAGQR VKTIRDIIALNPLYRESVLQMMQAGQRVVD LYRESVLQMMQAGQRVVDNPIYLSDMGAAL R E S Q R V 1 1 0 0 0 3 1 1 0 0 1 0 2 0 0 1 0 0 0 1 0 0 12 0 1376.6541 P36776 P36776 312 323 LONP1 Lon protease homolog, mitochondrial yes yes 2 8.6578E-24 237.44 By MS/MS 4 0 1 1 536060 536060 0 3981 809 4133 9664 6905 6905 1 14634 0 ESVTDYTTPSSSLPNTVATNNTK TMISVSSAEYGTNAKESVTDYTTPSSSLPN PSSSLPNTVATNNTKMEDTLVNNVPLPNTL K E S T K M 1 0 3 1 0 0 1 0 0 0 1 1 0 0 2 4 6 0 1 2 0 0 23 0 2426.1449 Q9Y520 Q9Y520 2185 2207 PRRC2C Protein PRRC2C yes yes 2 0.00038025 83.856 By MS/MS 1 0 1 1 226330 226330 0 3982 2963 4134 9665 6906 6906 1 11058 0 ESVVDYCNR WAKAKKGEEALFTTRESVVDYCNRLLKKQF ALFTTRESVVDYCNRLLKKQFFHRALKVMK R E S N R L 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 2 0 0 9 0 1140.487 Q99442 Q99442 76 84 SEC62 Translocation protein SEC62 yes yes 2 0.00042683 155 By MS/MS 5.5 0.5 1 1 2 3139600 3139600 0 3983 2266 4135 9666;9667 6907 6907 1 31248 0 ETAEALLQVLK GYVFQKAYLEFFTSRETAEALLQVLKKYEL FTSRETAEALLQVLKKYELRVNYHLVNVKG R E T L K K 2 0 0 0 0 1 2 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 11 0 1213.6918 P42898 P42898 520 530 MTHFR Methylenetetrahydrofolate reductase yes yes 2 0.0044415 130.66 By MS/MS 5 0 1 1 257260 257260 0 3984 859 4136 9668 6908 6908 1 10574 0 ETAENYLGHTAK YSPSQIGAFVLMKMKETAENYLGHTAKNAV KMKETAENYLGHTAKNAVITVPAYFNDSQR K E T A K N 2 0 1 0 0 0 2 1 1 0 1 1 0 0 0 0 2 0 1 0 0 0 12 0 1332.631 P38646 P38646 176 187 HSPA9 Stress-70 protein, mitochondrial yes yes 2 9.2781E-17 225.93 By MS/MS 5.5 0.5 1 1 2 2394800 2394800 0 3985 820 4137 9669;9670 6909 6909 1 76849 0 ETANAIVSQQTPQR ADQEIPETDWEVYLRETANAIVSQQTPQRL RETANAIVSQQTPQRLLEVRGRLYELLTHC R E T Q R L 2 1 1 0 0 3 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 14 0 1541.7798 P40938 P40938 257 270 RFC3 Replication factor C subunit 3 yes yes 2 9.4747E-13 237.76 By MS/MS 7.5 0.5 1 1 2 5855500 5855500 0 3986 834 4138 9671;9672 6910;6911 6910 2 118400 0 ETARPSCEIVDGTR CQAKVLNSLTQQEKKETARPSCEIVDGTRE KETARPSCEIVDGTREASNTERTASDGKAV K E T T R E 1 2 0 1 1 0 2 1 0 1 0 0 0 0 1 1 2 0 0 1 0 0 14 1 1589.7468 Q92538 Q92538 607 620 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.049741 58.071 By MS/MS 2.5 0.5 1 1 2 926700 926700 0 3987 2055 4139 9673;9674 6912 6912 1 40216 0 ETCAQTLGVVLK RFGDFVSDEVVAPVRETCAQTLGVVLKHMN PVRETCAQTLGVVLKHMNETGVHKTVDVLL R E T L K H 1 0 0 0 1 1 1 1 0 0 2 1 0 0 0 0 2 0 0 2 0 0 12 0 1317.6962 O14981 O14981 369 380 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.00023067 151.22 By MS/MS 2 0 1 1 331380 331380 0 3988 143 4140 9675 6913 6913 1 16471 0 ETDCGVHINAGPEIGVASTK LTVGITNTVGSSISRETDCGVHINAGPEIG VHINAGPEIGVASTKAYTSQFVSLVMFALM R E T T K A 2 0 1 1 1 0 2 3 1 2 0 1 0 0 1 1 2 0 0 2 0 0 20 0 2053.9739 Q06210;O94808 Q06210 475 494 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes no 3 0.0015682 88.282 By MS/MS 5 0 1 1 4719000 4719000 0 3989 1274 4141 9676 6914 6914 1 193970 0 ETEGDVTSVK GISSSSVLHGMVFKKETEGDVTSVKDAKIA MVFKKETEGDVTSVKDAKIAVYSCPFDGMI K E T V K D 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 1 2 0 0 2 0 0 10 0 1063.5033 P50990 P50990 226 235 CCT8 T-complex protein 1 subunit theta yes yes 2 0.012419 97.635 By MS/MS 1.5 0.5 1 1 2 748340 748340 0 3990 955 4142 9677;9678 6915;6916 6915 2 36759 0 ETEGDVTSVKDAK GISSSSVLHGMVFKKETEGDVTSVKDAKIA KKETEGDVTSVKDAKIAVYSCPFDGMITET K E T A K I 1 0 0 2 0 0 2 1 0 0 0 2 0 0 0 1 2 0 0 2 0 0 13 1 1377.6624 P50990 P50990 226 238 CCT8 T-complex protein 1 subunit theta yes yes 2 6.6552E-12 213.35 By MS/MS 7 0.816 1 1 1 3 80201000 80201000 0 3991 955 4143 9679;9680;9681 6917;6918;6919 6917 3 679120 0 ETENDDLTNVIQK PFIRPVMQALLHIIRETENDDLTNVIQKMI IRETENDDLTNVIQKMICEYSEEVTPIAVE R E T Q K M 0 0 2 2 0 1 2 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1517.7209 O95373 O95373 552 564 IPO7 Importin-7 yes yes 2 2.208E-18 231.07 By MS/MS 4 0.816 1 1 1 3 10259000 10259000 0 3992 388 4144 9682;9683;9684 6920;6921;6922 6921 3 298110 0 ETENDDVTNVIQK PHVRPIMQELLHIVRETENDDVTNVIQKMI VRETENDDVTNVIQKMICEYSQEVASIAVD R E T Q K M 0 0 2 2 0 1 2 0 0 1 0 1 0 0 0 0 2 0 0 2 0 0 13 0 1503.7053 O15397 O15397 553 565 IPO8 Importin-8 yes yes 2 5.5414E-12 207.88 By MS/MS 4 0 1 1 1912900 1912900 0 3993 175 4145 9685 6923 6923 1 52221 0 ETESQLLPDVGAIVTCK KSSENGALPVVSVVRETESQLLPDVGAIVT ESQLLPDVGAIVTCKVSSINSRFAKVHILY R E T C K V 1 0 0 1 1 1 2 1 0 1 2 1 0 0 1 1 2 0 0 2 0 0 17 0 1858.9346 Q9Y3B2 Q9Y3B2 58 74 EXOSC1 Exosome complex component CSL4 yes yes 2 0.027428 74.987 By MS/MS 9 0 1 1 248580 248580 0 3994 2924 4146 9686 6924 6924 1 142660 0 ETFDPEKETIPDIDPNAK TAATHGLDEEAESLKETFDPEKETIPDIDP DPEKETIPDIDPNAKLLQPPAPIMPLDTNW K E T A K L 1 0 1 3 0 0 3 0 0 2 0 2 0 1 3 0 2 0 0 0 0 0 18 1 2057.9793 P53621 P53621 776 793 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.046533 44.539 By MS/MS 3 0 1 1 548520 548520 0 3995 1005 4147 9687 6925 6925 1 14319 0 ETFEDSNLIPK EMRIPKNGIEKHLLRETFEDSNLIPKEILW HLLRETFEDSNLIPKEILWRPKEAFSDGIT R E T P K E 0 0 1 1 0 0 2 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1291.6296 P08243 P08243 450 460 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.0033885 114.5 By MS/MS 6 0 1 1 5454200 5454200 0 3996 503 4148 9688 6926 6926 1 42532 0 ETFLTSPEELYR RPVGVKIPTCKITLKETFLTSPEELYRVFT TLKETFLTSPEELYRVFTTQELVQAFTHAP K E T Y R V 0 1 0 0 0 0 3 0 0 0 2 0 0 1 1 1 2 0 1 0 0 0 12 0 1483.7195 O95433 O95433 213 224 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 2 4.4504E-07 182.39 By MS/MS 7.5 0.5 1 1 2 2597000 2597000 0 3997 393 4149 9689;9690 6927 6927 1 51665 0 ETGENVLHVR FGTPVINLGTRQIGRETGENVLHVRDADTQ RQIGRETGENVLHVRDADTQDKILQALHLQ R E T V R D 0 1 1 0 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1152.5887 Q9Y223 Q9Y223 326 335 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.0006717 138.08 By MS/MS 5 0 1 1 1151200 1151200 0 3998 2862 4150 9691 6928 6928 1 47318 0 ETGGAEGTGDAVLGEK PVVPAEKRSSGERARETGGAEGTGDAVLGE TGGAEGTGDAVLGEKVLEEALLSREHVLEL R E T E K V 2 0 0 1 0 0 3 5 0 0 1 1 0 0 0 0 2 0 0 1 0 0 16 0 1489.6896 Q92667 Q92667 198 213 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 1.0704E-11 246.63 By MS/MS 3 0 1 1 690040 690040 0 3999 2074 4151 9692 6929 6929 1 18013 0 ETGVDLTKDNMALQR FDQALLRHIVKEFKRETGVDLTKDNMALQR ETGVDLTKDNMALQRVREAAEKAKCELSSS R E T Q R V 1 1 1 2 0 1 1 1 0 0 2 1 1 0 0 0 2 0 0 1 0 0 15 1 1689.8356 P38646 P38646 293 307 HSPA9 Stress-70 protein, mitochondrial yes yes 2 5.2122E-10 194.48 By MS/MS By matching 5.25 0.433 3 1 3 1 10954000 10920000 33649 4000 820 4152;4153 9693;9694;9695;9696 6930;6931;6932 6932 565 3 418610 99567 ETGVPGLLTPLPDLDGVYELER MESMFSSPAEAALQRETGVPGLLTPLPDLD LTPLPDLDGVYELERVAGFVRDLGCERVAL R E T E R V 0 1 0 2 0 0 3 3 0 0 5 0 0 0 3 0 2 0 1 2 0 0 22 0 2382.2319 Q9BQC3 Q9BQC3 16 37 DPH2 Diphthamide biosynthesis protein 2 yes yes 2 0.00069064 82.651 By MS/MS 6 0 1 1 162060 162060 0 4001 2312 4154 9697 6933 6933 1 1263.8 0 ETHASAPVK VKRRMKVEMERGLSKETHASAPVKMLPTYV ERGLSKETHASAPVKMLPTYVCATPDGTEK K E T V K M 2 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 9 0 938.48214 P52789 P52789 502 510 HK2 Hexokinase-2 yes yes 2 0.00086498 145.16 By MS/MS 4 0 1 1 1125300 1125300 0 4002 992 4155 9698 6934 6934 1 30719 0 ETIDNNSVSSPLQSLQQR MQNWDAAMEDLTRLKETIDNNSVSSPLQSL DNNSVSSPLQSLQQRTWLIHWSLFVFFNHP K E T Q R T 0 1 2 1 0 3 1 0 0 1 2 0 0 0 1 4 1 0 0 1 0 0 18 0 2014.992 P60228 P60228 194 211 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 9.9326E-34 244.23 By MS/MS 6.5 0.5 1 1 2 11731000 11731000 0 4003 1065 4156 9699;9700 6935;6936;6937 6936 3 107600 0 ETIIAFAWEPNGSK RMREKQVPVDVVEMKETIIAFAWEPNGSKF KETIIAFAWEPNGSKFAVLHGEAPRISVSF K E T S K F 2 0 1 0 0 0 2 1 0 2 0 1 0 1 1 1 1 1 0 0 0 0 14 0 1561.7777 P55884 P55884 563 576 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0099144 94.767 By MS/MS 4 0 1 1 148940 148940 0 4004 1040 4157 9701 6938 6938 1 4065.8 0 ETIPLQETSLYTQDR VDSEWFGFYRSGQAKETIPLQETSLYTQDR ETIPLQETSLYTQDRLGLKEMDNAGQLVFL K E T D R L 0 1 0 1 0 2 2 0 0 1 2 0 0 0 1 1 3 0 1 0 0 0 15 0 1792.8843 P50897 P50897 254 268 PPT1 Palmitoyl-protein thioesterase 1 yes yes 2 4.5064E-10 188.48 By MS/MS 8 0.816 1 1 1 3 2143200 2143200 0 4005 953 4158 9702;9703;9704 6939 6939 1 135100 0 ETITAPVPFDFTHK YGCPCITGKPKVAFRETITAPVPFDFTHKK RETITAPVPFDFTHKKQSGGAGQYGKVIGV R E T H K K 1 0 0 1 0 0 1 0 1 1 0 1 0 2 2 0 3 0 0 1 0 0 14 0 1601.809 Q96RP9 Q96RP9 527 540 GFM1 Elongation factor G, mitochondrial yes yes 2 0.015413 86.189 By MS/MS 5.5 0.5 1 1 2 1086500 1086500 0 4006 2247 4159 9705;9706 6940;6941 6940 2 25234 0 ETLAQLQQEFQR ESQLRDLERQSEQQRETLAQLQQEFQRAQA QQRETLAQLQQEFQRAQAAKAGAPGKA___ R E T Q R A 1 1 0 0 0 4 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 12 0 1489.7525 O15212 O15212 106 117 PFDN6 Prefoldin subunit 6 yes yes 2;3 1.1482E-97 355.77 By MS/MS 10 0 2 2 865300 865300 0 4007 159 4160 9707;9708 6942;6943;6944 6943 3 919720 0 ETLEQQK IVGLSVETERKKLPKETLEQQKRICEMAAY TERKKLPKETLEQQKRICEMAAYFTHSNLQ K E T Q K R 0 0 0 0 0 2 2 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 874.43961 P53621 P53621 1076 1082 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.050496 101.21 By MS/MS 1 0 1 1 266170 266170 0 4008 1005 4161 9709 6945 6945 1 13005 0 ETLIDVAR LQFLEEVKVSREMDRETLIDVARTSLRTKV VSREMDRETLIDVARTSLRTKVHAELADVL R E T A R T 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 915.50255 P40227 P40227 146 153 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.054049 101.69 By MS/MS 6 0 1 1 6154000 6154000 0 4009 828 4162 9710 6946 6946 1 47989 0 ETLLNSATTSLNSK EILTDMSRPVELSDRETLLNSATTSLNSKV RETLLNSATTSLNSKVVSQYSSLLSPMSVN R E T S K V 1 0 2 0 0 0 1 0 0 0 3 1 0 0 0 3 3 0 0 0 0 0 14 0 1477.7624 P50991 P50991 161 174 CCT4 T-complex protein 1 subunit delta yes yes 2 2.727E-27 251.75 By MS/MS By MS/MS 6.22 2.66 1 1 3 1 1 1 1 8 1 80958000 80743000 215780 4010 956 4163 9711;9712;9713;9714;9715;9716;9717;9718;9719 6947;6948;6949;6950;6951;6952;6953 6952 7 3072100 661780 ETLQALDMPVLPVTATEIR PRNLAPGPPRRRYRKETLQALDMPVLPVTA ALDMPVLPVTATEIRQYLRGHGIPFQDGHS K E T I R Q 2 1 0 1 0 1 2 0 0 1 3 0 1 0 2 0 3 0 0 2 0 0 19 0 2096.1187 Q96RR1 Q96RR1 43 61 PEO1 Twinkle protein, mitochondrial yes yes 2 5.5999E-12 173.25 By MS/MS 5 0 1 1 207220 207220 0 4011 2250 4164 9720 6954 6954 1420 1 8517.5 0 ETLQAVPKPGAFDLEQVK FCSEPQKILEASQLKETLQAVPKPGAFDLE QAVPKPGAFDLEQVKRSTYFFS________ K E T V K R 2 0 0 1 0 2 2 1 0 0 2 2 0 1 2 0 1 0 0 2 0 0 18 1 1969.052 O00411 O00411 1206 1223 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.00718 78.166 By MS/MS 3 0 1 1 1780700 1780700 0 4012 92 4165 9721 6955 6955 1 46485 0 ETLQAVPKPGAFDLEQVKR FCSEPQKILEASQLKETLQAVPKPGAFDLE AVPKPGAFDLEQVKRSTYFFS_________ K E T K R S 2 1 0 1 0 2 2 1 0 0 2 2 0 1 2 0 1 0 0 2 0 0 19 2 2125.1532 O00411 O00411 1206 1224 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.0035253 82.774 By MS/MS 3 0 1 1 1447200 1447200 0 4013 92 4166 9722 6956 6956 1 37779 0 ETLQQHK KGVVDSDDLPLNVSRETLQQHKLLKVIRKK DLPLNVSRETLQQHKLLKVIRKKLVRKTLD R E T H K L 0 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 882.45593 P14625 P14625 449 455 HSP90B1 Endoplasmin yes yes 2 0.011025 151.17 By MS/MS 4 0 1 1 1233600 1233600 0 4014 589 4167 9723 6957 6957 1 33676 0 ETLVYLTHLDYVDTER FMKDTDSINLYKNMRETLVYLTHLDYVDTE TLVYLTHLDYVDTERIMTEKLHNQVNGTEW R E T E R I 0 1 0 2 0 0 2 0 1 0 3 0 0 0 0 0 3 0 2 2 0 0 16 0 1965.9684 O14980 O14980 459 474 XPO1 Exportin-1 yes yes 2;3 0.00022723 160.56 By MS/MS 4 0 2 2 1138600 1138600 0 4015 142 4168 9724;9725 6958;6959 6959 2 31084 0 ETNFQVMQMK CQALVRMLAKKPGWKETNFQVMQMKLHIVA KPGWKETNFQVMQMKLHIVALIAQKGNFSK K E T M K L 0 0 1 0 0 2 1 0 0 0 0 1 2 1 0 0 1 0 0 1 0 0 10 0 1254.5737 Q14008 Q14008 652 661 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00083388 130.56 By MS/MS 2 0 1 1 229980 229980 0 4016 1405 4169 9726 6960 6960 1 11431 0 ETNISYSQEADDR TPPSVVNEDFLHDLKETNISYSQEADDRVF LKETNISYSQEADDRVFRAHGHCLHEIFLL K E T D R V 1 1 1 2 0 1 2 0 0 1 0 0 0 0 0 2 1 0 1 0 0 0 13 0 1526.6485 O00116 O00116 170 182 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 8.5579E-12 204.32 By MS/MS 5 0 1 1 1260600 1260600 0 4017 67 4170 9727 6961 6961 1 51817 0 ETPALTINR IYLARHVGLRVGIPKETPALTINRLCGSGF RVGIPKETPALTINRLCGSGFQSIVNGCQE K E T N R L 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 9 0 1013.5506 P42765 P42765 82 90 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 0.0098498 105.14 By MS/MS 7 0 1 1 7891400 7891400 0 4018 855 4171 9728 6962 6962 1 141020 0 ETQDPTAQSLAASLSTR QEALDKLLSFTHKLRETQDPTAQSLAASLS QDPTAQSLAASLSTRQLLRISRRLSQYPNE R E T T R Q 3 1 0 1 0 2 1 0 0 0 2 0 0 0 1 3 3 0 0 0 0 0 17 0 1774.8697 A3KMH1 A3KMH1 644 660 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 9.1407E-14 203.2 By MS/MS 3.5 1.12 1 1 1 1 4 3812800 3812800 0 4019 13 4172 9729;9730;9731;9732 6963;6964;6965 6963 3 145170 0 ETQELVSEAYPILEQK VIILEDELEKLVCTKETQELVSEAYPILEQ TQELVSEAYPILEQKLKLIQPHVQASNNCW K E T Q K L 1 0 0 0 0 2 4 0 0 1 2 1 0 0 1 1 1 0 1 1 0 0 16 0 1875.9466 Q9HBM0 Q9HBM0 459 474 VEZT Vezatin yes yes 2 7.736E-08 171.36 By MS/MS 4 0 1 1 557780 557780 0 4020 2553 4173 9733 6966 6966 1 15227 0 ETQSQLETER RIEERCRRKLEDSTRETQSQLETERSRYQR EDSTRETQSQLETERSRYQREIDKLRQRPY R E T E R S 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 10 0 1219.5681 P15924 P15924 1923 1932 DSP Desmoplakin yes yes 2 4.985E-29 265.67 By MS/MS By MS/MS 3.2 1.47 2 2 1 2 3 1601700 1177600 424110 4021 603 4174 9734;9735;9736;9737;9738 6967;6968;6969 6969 3 55877 724110 ETQSTPQSAPQVR SQLSITQVASIKQLRETQSTPQSAPQVRRP LRETQSTPQSAPQVRRPLHPALNQPGGLQP R E T V R R 1 1 0 0 0 3 1 0 0 0 0 0 0 0 2 2 2 0 0 1 0 0 13 0 1427.7005 Q9UJF2 Q9UJF2 751 763 RASAL2 Ras GTPase-activating protein nGAP yes yes 2 0.00027465 144.7 By MS/MS 3.5 0.5 1 1 2 495730 495730 0 4022 2795 4175 9739;9740 6970 6970 1 13031 0 ETQVILLDTPGIISPGK VHTTRCQALGVITEKETQVILLDTPGIISP QVILLDTPGIISPGKQKRHHLELSLLEDPW K E T G K Q 0 0 0 1 0 1 1 2 0 3 2 1 0 0 2 1 2 0 0 1 0 0 17 0 1779.9982 O75616 O75616 160 176 ERAL1 GTPase Era, mitochondrial yes yes 2;3 2.4422E-43 258.6 By MS/MS 8.2 1.17 2 1 1 1 5 13337000 13337000 0 4023 321 4176 9741;9742;9743;9744;9745 6971;6972;6973;6974;6975 6973 5 372930 0 ETSAATLSPGASSR SDTSSVSLEVSPGSRETSAATLSPGASSRG RETSAATLSPGASSRGWDDGDTRSEHSYSE R E T S R G 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 4 2 0 0 0 0 0 14 0 1333.6474 Q9Y6I9 Q9Y6I9 237 250 TEX264 Testis-expressed sequence 264 protein yes yes 2 4.5462E-06 173.04 By MS/MS By matching 7.33 0.471 2 1 2 1 11056000 11023000 33622 4024 3007 4177 9746;9747;9748 6976;6977 6976 2 226650 138020 ETSALEASSPLLTGQILER SVEKIEKILNSQSSKETSALEASSPLLTGQ LEASSPLLTGQILERIATEFNQLQFHAVQS K E T E R I 2 1 0 0 0 1 3 1 0 1 4 0 0 0 1 3 2 0 0 0 0 0 19 0 2014.0582 Q14746 Q14746 154 172 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 2 9.1817E-15 226.93 By MS/MS 5.5 0.5 1 1 2 1067700 1067700 0 4025 1446 4178 9749;9750 6978 6978 1 27721 0 ETSEELLPPPVQTQIK IKSQDFYEKEKLLSKETSEELLPPPVQTQI TSEELLPPPVQTQIKGHASAPYFGKEEPSV K E T I K G 0 0 0 0 0 2 3 0 0 1 2 1 0 0 3 1 2 0 0 1 0 0 16 0 1807.9567 Q8N183 Q8N183 115 130 NDUFAF2 Mimitin, mitochondrial yes yes 2 0.0097098 93.839 By MS/MS 9.5 0.5 1 1 2 1215800 1215800 0 4026 1896 4179 9751;9752 6979 6979 1 738020 0 ETSFNQAYGR EPLHAMMERGPQTLKETSFNQAYGRDLMEA PQTLKETSFNQAYGRDLMEAQEWCRKYMKS K E T G R D 1 1 1 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 10 0 1171.5258 P42345 P42345 2067 2076 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.001043 120.87 By MS/MS 2.5 0.5 1 1 2 573670 573670 0 4027 849 4180 9753;9754 6980 6980 1 23438 0 ETSMVHELNR AKQLKEQQMVMRGHRETSMVHELNRYIPTA MRGHRETSMVHELNRYIPTAAAFGGLCIGA R E T N R Y 0 1 1 0 0 0 2 0 1 0 1 0 1 0 0 1 1 0 0 1 0 0 10 0 1214.5714 P61619 P61619 406 415 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 2 0.027438 99.815 By MS/MS 2 0.816 1 1 1 3 384230 384230 0 4028 1103 4181 9755;9756;9757 6981 6981 1 16912 0 ETSSLESFVR APMSSSASVPNLSSRETSSLESFVRRVANI NLSSRETSSLESFVRRVANIARTNATNNMN R E T V R R 0 1 0 0 0 0 2 0 0 0 1 0 0 1 0 3 1 0 0 1 0 0 10 0 1153.5615 Q9ULT8 Q9ULT8 1541 1550 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00069207 137.14 By MS/MS 2 0.816 1 1 1 3 1039900 1039900 0 4029 2826 4182 9758;9759;9760 6982;6983 6982 2 40683 0 ETTDTDTADQVIASFK SGLVTFQAFIDFMSRETTDTDTADQVIASF TTDTDTADQVIASFKVLAGDKNFITAEELR R E T F K V 2 0 0 3 0 1 1 0 0 1 0 1 0 1 0 1 4 0 0 1 0 0 16 0 1740.8054 O43707 O43707 838 853 ACTN4 Alpha-actinin-4 yes yes 2 5.4134E-78 324.41 By MS/MS 4 0 1 1 2642500 2642500 0 4030 217 4183 9761 6984;6985 6984 2 72138 0 ETTEVDLLTK VTEPQVAEKNEANGRETTEVDLLTKELEDF EANGRETTEVDLLTKELEDFEMKKAAARAV R E T T K E 0 0 0 1 0 0 2 0 0 0 2 1 0 0 0 0 3 0 0 1 0 0 10 0 1147.5972 Q9UG63 Q9UG63 49 58 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.02476 89.047 By MS/MS 5 0 1 1 1356400 1356400 0 4031 2771 4184 9762 6986 6986 1 55754 0 ETTNIFSNCGCVR ERVIDLLRVIHVAGKETTNIFSNCGCVRAE GKETTNIFSNCGCVRAEGDISNVANGFKSH K E T V R A 0 1 2 0 2 0 1 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 13 0 1556.6712 Q9UBB4 Q9UBB4 346 358 ATXN10 Ataxin-10 yes yes 2 1.4149E-11 197.73 By MS/MS 6.5 0.5 1 1 2 5406500 5406500 0 4032 2744 4185 9763;9764 6987 6987 1 85371 0 ETTVGAVTVTHK TFCRWLENSLKGLPKETTVGAVTVTHKQLT LPKETTVGAVTVTHKQLTDFHKQVTSAEEC K E T H K Q 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 4 0 0 3 0 0 12 0 1241.6616 Q9Y5L0 Q9Y5L0 882 893 TNPO3 Transportin-3 yes yes 2 0.00045983 161.51 By MS/MS 4 0 1 1 759310 759310 0 4033 2974 4186 9765 6988 6988 1 20728 0 ETVLSALSR AKHYQFASGAFLHIKETVLSALSREPTVDI AFLHIKETVLSALSREPTVDISPDTVGTLS K E T S R E 1 1 0 0 0 0 1 0 0 0 2 0 0 0 0 2 1 0 0 1 0 0 9 0 974.53966 Q8WUM4 Q8WUM4 165 173 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.004042 117.81 By MS/MS 4 0 1 1 766230 766230 0 4034 2019 4187 9766 6989 6989 1 20917 0 ETVSEESNVLCLSK ACIPIKKSDPVVSYRETVSEESNVLCLSKS RETVSEESNVLCLSKSPNKHNRLYMKARPF R E T S K S 0 0 1 0 1 0 3 0 0 0 2 1 0 0 0 3 1 0 0 2 0 0 14 0 1593.7556 P13639 P13639 581 594 EEF2 Elongation factor 2 yes yes 2 2.7996E-46 277.15 By MS/MS 4.44 2.17 1 1 1 2 1 1 1 1 9 91103000 91103000 0 4035 576 4188 9767;9768;9769;9770;9771;9772;9773;9774;9775 6990;6991;6992;6993;6994 6992 5 2645600 0 ETYLAILMDR KVNKVMVAEALDISRETYLAILMDRSCNGP LDISRETYLAILMDRSCNGPVLVGSPQGGV R E T D R S 1 1 0 1 0 0 1 0 0 1 2 0 1 0 0 0 1 0 1 0 0 0 10 0 1223.622 Q96I99 Q96I99 151 160 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.0070796 122.96 By MS/MS 7 0 2 2 277740 277740 0 4036 2200 4189;4190 9776;9777 6995;6996 6996 1405 1 4963.3 0 ETYTEDFIKK TAFVIPKKNVPTSKRETYTEDFIKKQIEEF PTSKRETYTEDFIKKQIEEFNIGKRHLANM R E T K K Q 0 0 0 1 0 0 2 0 0 1 0 2 0 1 0 0 2 0 1 0 0 0 10 1 1272.6238 P82933 P82933 67 76 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.0034114 128.36 By MS/MS 7.5 0.5 1 1 2 13259000 13259000 0 4037 1211 4191 9778;9779 6997 6997 1 253570 0 ETYYLSDSPLLGPPVGEPR EKEKEMKKSPTSLKRETYYLSDSPLLGPPV LSDSPLLGPPVGEPRLLASSPALPSSGAQA R E T P R L 0 1 0 1 0 0 2 2 0 0 3 0 0 0 4 2 1 0 2 1 0 0 19 0 2089.0368 Q9NYZ3 Q9NYZ3 145 163 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 1.2092E-07 151.3 By MS/MS 4 0 1 1 293240 293240 0 4038 2702 4192 9780 6998 6998 1 8005.2 0 EVAAFAQFGSDLDAATQQLLSR KQVAGTMKLELAQYREVAAFAQFGSDLDAA FGSDLDAATQQLLSRGVRLTELLKQGQYSP R E V S R G 5 1 0 2 0 3 1 1 0 0 3 0 0 2 0 2 1 0 0 1 0 0 22 0 2337.1601 P25705 P25705 442 463 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.00021994 102.39 By MS/MS 6 0 2 2 784380 784380 0 4039 687 4193 9781;9782 6999;7000 6999 2 6116.6 0 EVAAGYLVPLLR ARGSGGAGALPEAAREVAAGYLVPLLRSLR AAREVAAGYLVPLLRSLRGRPAGGPDPSLQ R E V L R S 2 1 0 0 0 0 1 1 0 0 3 0 0 0 1 0 0 0 1 2 0 0 12 0 1299.7551 Q13395 Q13395 63 74 TARBP1 Probable methyltransferase TARBP1 yes yes 2 5.3568E-11 203.35 By MS/MS 3.5 0.5 1 1 2 549120 549120 0 4040 1362 4194 9783;9784 7001;7002 7001 2 14401 0 EVADSYAQNAK TVSTIDEEEEEIEAREVADSYAQNAKVIEK IEAREVADSYAQNAKVIEKQLERKGMSKRR R E V A K V 3 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 11 0 1194.5517 Q9H5V9 Q9H5V9 173 183 CXorf56 UPF0428 protein CXorf56 yes yes 2 1.8704E-29 262.84 By MS/MS 8 0 1 1 1315200 1315200 0 4041 2506 4195 9785 7003 7003 1 86764 0 EVADVLVDGYNVHYGAR KRAKQRHNITLLWDREVADVLVDGYNVHYG ADVLVDGYNVHYGARSIKHEVERRVVNQLA R E V A R S 2 1 1 2 0 0 1 2 1 0 1 0 0 0 0 0 0 0 2 4 0 0 17 0 1875.9115 Q9H078 Q9H078 604 620 CLPB Caseinolytic peptidase B protein homolog yes yes 2 3.4764E-43 253.42 By MS/MS 6 0 1 1 8261300 8261300 0 4042 2448 4196 9786 7004 7004 1 64422 0 EVAESCKDIK NIMRMSDGLFLQKCREVAESCKDIKFNEMY LQKCREVAESCKDIKFNEMYLDTVCLNMVQ R E V I K F 1 0 0 1 1 0 2 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1177.5649 P50213 P50213 217 226 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.002355 152.06 By MS/MS By matching 7.33 0.471 2 1 2 1 4077800 4071200 6538.2 4043 943 4197 9787;9788;9789 7005;7006 7005 2 103400 26841 EVAETSAGPSVVSVK LELQEDVQEMNAVRKEVAETSAGPSVVSVK EVAETSAGPSVVSVKTDGGDPSGLLKNFQD K E V V K T 2 0 0 0 0 0 2 1 0 0 0 1 0 0 1 3 1 0 0 4 0 0 15 0 1458.7566 P13196 P13196 143 157 ALAS1 5-aminolevulinate synthase, nonspecific, mitochondrial yes yes 2 3.9206E-14 196.38 By MS/MS 5.5 0.5 1 1 2 3232100 3232100 0 4044 572 4198 9790;9791 7007 7007 1 93823 0 EVAFFNNFLTDAK HIFNKHAEKIEEVKKEVAFFNNFLTDAKRP KKEVAFFNNFLTDAKRPALPEIKPAQPPGP K E V A K R 2 0 2 1 0 0 1 0 0 0 1 1 0 3 0 0 1 0 0 1 0 0 13 0 1514.7405 Q9BXP5 Q9BXP5 746 758 SRRT Serrate RNA effector molecule homolog yes yes 2 2.4266E-25 241.31 By MS/MS 4.5 1.12 1 1 1 1 4 1587400 1587400 0 4045 2402 4199 9792;9793;9794;9795 7008 7008 1 35690 0 EVANSTANLVK TTNPTAKRQFVQSAKEVANSTANLVKTIKA QSAKEVANSTANLVKTIKALDGAFTEENRA K E V V K T 2 0 2 0 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1144.6088 Q9Y490;Q9Y4G6 Q9Y490 1531 1541 TLN1;TLN2 Talin-1;Talin-2 yes no 2 8.9588E-07 179.81 By MS/MS 2 0.816 1 1 1 3 2801600 2801600 0 4046 2947 4200 9796;9797;9798 7009 7009 1 117200 0 EVATNSELVQSGK DAEEWFFTKTEELNREVATNSELVQSGKSE NREVATNSELVQSGKSEISELRRTMQNLEI R E V G K S 1 0 1 0 0 1 2 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 13 0 1360.6834 CON__P02533;P02533;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 316 328 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 2 4.0022E-26 250.26 By MS/MS By MS/MS 5.47 2.63 1 1 2 2 2 2 1 1 2 1 7 8 14423000 6923000 7500200 + 4047 35;54 4201 9799;9800;9801;9802;9803;9804;9805;9806;9807;9808;9809;9810;9811;9812;9813 7010;7011;7012;7013;7014;7015;7016;7017;7018;7019;7020;7021;7022 7022 13 1359900 15916000 EVAWNLTSVDLVR AAKNLQKEVIHRKSKEVAWNLTSVDLVRAS SKEVAWNLTSVDLVRASEAHCHYVVVKLFS K E V V R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 1 1 1 0 3 0 0 13 0 1500.7936 Q15067 Q15067 513 525 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 2 0.0035135 111.52 By MS/MS 9 0 1 1 59926 59926 0 4048 1476 4202 9814 7023 7023 1 34392 0 EVCFTIENK AFPAREFLRKKLIGKEVCFTIENKTPQGRE KKLIGKEVCFTIENKTPQGREYGMIYLGKD K E V N K T 0 0 1 0 1 0 2 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 9 0 1138.5329 Q7KZF4 Q7KZF4 94 102 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.01145 101.64 By MS/MS 4 0 1 1 1150600 1150600 0 4049 1757 4203 9815 7024 7024 1 31411 0 EVCGFAPYER GRLTKHTKFVRDMIREVCGFAPYERRAMEL RDMIREVCGFAPYERRAMELLKVSKDKRAL R E V E R R 1 1 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 0 1 1 0 0 10 0 1226.539 Q9Y3U8 Q9Y3U8 46 55 RPL36 60S ribosomal protein L36 yes yes 2 0.0053149 106.42 By MS/MS 10 0 1 1 605380 605380 0 4050 2943 4204 9816 7025 7025 1 643460 0 EVCQLLPFLVR ILGAWLAEETSSLRKEVCQLLPFLVRYAKT SLRKEVCQLLPFLVRYAKTLYEEAEEANDL K E V V R Y 0 1 0 0 1 1 1 0 0 0 3 0 0 1 1 0 0 0 0 2 0 0 11 0 1372.7537 Q9UBB6 Q9UBB6 413 423 NCDN Neurochondrin yes yes 2 1.6796E-10 195.79 By MS/MS 5.5 0.5 1 1 2 700810 700810 0 4051 2745 4205 9817;9818 7026;7027 7027 2 14566 0 EVDALDGLCSR CNPSFGGIGKGHLMREVDALDGLCSRICDQ HLMREVDALDGLCSRICDQSGVHYKVLNRR R E V S R I 1 1 0 2 1 0 1 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1233.566 Q9Y2Z2 Q9Y2Z2 92 102 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 1.1542E-10 201.61 By MS/MS 5 0 1 1 2131600 2131600 0 4052 2908 4206 9819 7028 7028 1 87618 0 EVDDLGPEVGDIK TGQEEIDEACKRIKREVDDLGPEVGDIKII KREVDDLGPEVGDIKIIPLYSTLPPQQQQR R E V I K I 0 0 0 3 0 0 2 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1384.6722 O43143 O43143 372 384 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 0.0027704 115.57 By MS/MS 4 0 1 1 1014400 1014400 0 4053 181 4207 9820 7029 7029 1 27691 0 EVDEQMLAIQSK YLTVATVFRGRMSMKEVDEQMLAIQSKNSS SMKEVDEQMLAIQSKNSSYFVEWIPNNVKV K E V S K N 1 0 0 1 0 2 2 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1389.681 Q13509;Q9BUF5 Q13509 325 336 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 2 3.2691E-33 311.02 By MS/MS 6 0 1 1 5185700 5185700 0 4054 1377;2363 4208 9821 7030 7030 1 40438 0 EVDEQMLNVQNK YLTVAAVFRGRMSMKEVDEQMLNVQNKNSS SMKEVDEQMLNVQNKNSSYFVEWIPNNVKT K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 P07437;P68371;Q13885;Q9BVA1 P68371 325 336 TUBB;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 1.801E-114 376.23 By MS/MS By MS/MS 6 2.39 1 1 1 1 3 3 2 2 12 2 292360000 292100000 261350 4055 1187;490;1400;2375 4209;4210 9822;9823;9824;9825;9826;9827;9828;9829;9830;9831;9832;9833;9834;9835 7031;7032;7033;7034;7035;7036;7037;7038;7039;7040;7041;7042 7039 278 12 5003600 882490 EVDIGIPDATGR NSIDPALRRFGRFDREVDIGIPDATGRLEI FDREVDIGIPDATGRLEILQIHTKNMKLAD R E V G R L 1 1 0 2 0 0 1 2 0 2 0 0 0 0 1 0 1 0 0 1 0 0 12 0 1241.6252 P55072 P55072 366 377 VCP Transitional endoplasmic reticulum ATPase yes yes 2 7.4054E-05 160.75 By MS/MS By matching 4.33 0.471 2 1 2 1 5376900 5353900 22967 4056 1026 4211 9836;9837;9838 7043 7043 1 153420 47992 EVDVFSPLR ISPQLLLATQRFLSREVDVFSPLRISEKVL QRFLSREVDVFSPLRISEKVLLHLLKHPSV R E V L R I 0 1 0 1 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 2 0 0 9 0 1060.5553 Q8NE01 Q8NE01 507 515 CNNM3 Metal transporter CNNM3 yes yes 2 0.0015667 134.48 By MS/MS 5 0 1 1 491370 491370 0 4057 1960 4212 9839 7044 7044 1 20197 0 EVDVGLAADVGTLQR CDIRYCAQDAFFQVKEVDVGLAADVGTLQR EVDVGLAADVGTLQRLPKVIGNQSLVNELA K E V Q R L 2 1 0 2 0 1 1 2 0 0 2 0 0 0 0 0 1 0 0 3 0 0 15 0 1541.8049 Q13011 Q13011 197 211 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 2 1.5894E-38 264.3 By MS/MS 8 0 1 1 612450 612450 0 4058 1324 4213 9840 7045 7045 1 40403 0 EVDYSDSLTEK EEEEKMFGRGSRHRKEVDYSDSLTEKQWLK RHRKEVDYSDSLTEKQWLKAIEEGTLEEIE K E V E K Q 0 0 0 2 0 0 2 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 11 0 1284.5721 P51532 P51532 1376 1386 SMARCA4 Transcription activator BRG1 yes yes 2 0.039558 79.489 By MS/MS 2 0 1 1 274730 274730 0 4059 965 4214 9841 7046 7046 1 13656 0 EVEEDEYKAFYK ELMNDIKPIWQRPSKEVEEDEYKAFYKSFS PSKEVEEDEYKAFYKSFSKESDDPMAYIHF K E V Y K S 1 0 0 1 0 0 4 0 0 0 0 2 0 1 0 0 0 0 2 1 0 0 12 1 1548.6984 P14625 P14625 349 360 HSP90B1 Endoplasmin yes yes 2 1.065E-42 271.26 By MS/MS 4.5 0.5 1 1 2 2271900 2271900 0 4060 589 4215 9842;9843 7047 7047 1 67528 0 EVEETDEMDQVELVDFDPNQER PDKLSLLEKLLPERKEVEETDEMDQVELVD MDQVELVDFDPNQERRRHYNGEAYEDDEHH K E V E R R 0 1 1 4 0 2 6 0 0 0 1 0 1 1 1 0 1 0 0 3 0 0 22 0 2665.1337 P31689 P31689 351 372 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 1.3178E-06 154.69 By MS/MS 6 0 2 2 4923100 4923100 0 4061 755 4216 9844;9845 7048;7049 7048 2 38390 0 EVELPLTNFR RLALTLKVTGLGTTREVELPLTNFRSTIFY LGTTREVELPLTNFRSTIFYYVQKLLQLSC R E V F R S 0 1 1 0 0 0 2 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 10 0 1216.6452 Q9ULT8 Q9ULT8 1831 1840 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.015093 95.775 By MS/MS 2.5 0.5 1 1 2 1235200 1235200 0 4062 2826 4217 9846;9847 7050;7051 7050 2 45373 0 EVEPEPTEDKDLEADEEDTR EGDTQTEETQPSETKEVEPEPTEDKDLEAD PTEDKDLEADEEDTRKKDASDDLDDLNFFN K E V T R K 1 1 0 4 0 0 7 0 0 0 1 1 0 0 2 0 2 0 0 1 0 0 20 1 2345.003 P20042 P20042 43 62 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.00035486 106.44 By MS/MS By matching 6 0 2 1 1 5054400 5020800 33628 4063 638 4218 9848;9849 7052 7052 1 39152 103130 EVEQFTQVAK CQQREGQNYQQNCIKEVEQFTQVAKAYQDR QNCIKEVEQFTQVAKAYQDRYQDLGAYSSA K E V A K A 1 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1177.5979 O96000 O96000 122 131 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 3.3258E-48 291.35 By MS/MS 9.5 0.5 1 1 2 14409000 14409000 0 4064 417 4219 9850;9851 7053;7054 7053 2 8269500 0 EVEQLIK TRENGKTVIRVLKQKEVEQLIKKHEEEEAK VIRVLKQKEVEQLIKKHEEEEAKAEREKKE K E V I K K 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 857.48583 P25789 P25789 232 238 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.036682 110.34 By MS/MS 7.5 0.5 1 1 2 6229000 6229000 0 4065 691 4220 9852;9853 7055 7055 1 331870 0 EVESFAR FPCNQFGESEPRPSKEVESFARKNYGVTFP ESEPRPSKEVESFARKNYGVTFPIFHKIKI K E V A R K 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 7 0 836.40283 Q8TED1 Q8TED1 121 127 GPX8 Probable glutathione peroxidase 8 yes yes 2 0.040433 107.74 By MS/MS 9 0 1 1 1525900 1525900 0 4066 2001 4221 9854 7056 7056 1 875730 0 EVESFQQLLNAR MMLGVLMERAADDSKEVESFQQLLNARTQE DSKEVESFQQLLNARTQEFIEELLSPPFGG K E V A R T 1 1 1 0 0 2 2 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 12 0 1432.731 Q8N1B4 Q8N1B4 585 596 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 4.5297E-06 175.93 By MS/MS 4 0 1 1 277890 277890 0 4067 1897 4222 9855 7057 7057 1 7586 0 EVEYIALSR LRRSIAMQYLELTKREVEYIALSRDTTETD LELTKREVEYIALSRDTTETDLKQRREIRA R E V S R D 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1078.5659 A3KMH1 A3KMH1 130 138 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 4.6552E-06 178.94 By MS/MS 3 0.816 1 1 1 3 2143400 2143400 0 4068 13 4223 9856;9857;9858 7058;7059 7058 2 78419 0 EVFAEAVR VRYLECSALQQDGVKEVFAEAVRAVLNPTP LQQDGVKEVFAEAVRAVLNPTPIKRGRSCI K E V V R A 2 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 919.47633 P84095 P84095 167 174 RHOG Rho-related GTP-binding protein RhoG yes yes 2 0.0069891 129.68 By MS/MS 9 0 1 1 868780 868780 0 4069 1217 4224 9859 7060 7060 1 498600 0 EVFEMATR FGYMECSAKTKDGVREVFEMATRAALQARR KTKDGVREVFEMATRAALQARRGKKKSGCL R E V T R A 1 1 0 0 0 0 2 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 8 0 981.45897 P61586;P08134 P61586 169 176 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 2 0.0026104 143.89 By MS/MS 9 0 2 2 1917500 1917500 0 4070 1101;498 4225;4226 9860;9861 7061;7062 7061 297 2 1100500 0 EVFETATR YDYLECSAKTKEGVREVFETATRAALQKRY KTKEGVREVFETATRAALQKRYGSQNGCIN R E V T R A 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 8 0 951.46616 P62745 P62745 169 176 RHOB Rho-related GTP-binding protein RhoB yes yes 2 0.0088433 126.52 By MS/MS 9 0 1 1 0 0 0 4071 1141 4227 9862 7063 7063 1 0 0 EVFLGTLNDR AVLQRMMDASVYLQREVFLGTLNDRTNAID VYLQREVFLGTLNDRTNAIDFLMDRNNVVP R E V D R T 0 1 1 1 0 0 1 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1162.5982 Q9NYU1 Q9NYU1 656 665 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 0.0046493 138.08 By MS/MS 3 0 1 1 842440 842440 0 4072 2698 4228 9863 7064 7064 0 21992 0 EVFLVMPTGGGK RPLQLETINVTMAGKEVFLVMPTGGGKSLC AGKEVFLVMPTGGGKSLCYQLPALCSDGFT K E V G K S 0 0 0 0 0 0 1 3 0 0 1 1 1 1 1 0 1 0 0 2 0 0 12 0 1233.6427 P46063 P46063 108 119 RECQL ATP-dependent DNA helicase Q1 yes yes 2 0.00036791 144.77 By MS/MS 1 0 1 1 67206 67206 0 4073 877 4229 9864 7065 7065 1 3283.6 0 EVFQTASER ELKDFLPSLWASIRREVFQTASERVEAEGL WASIRREVFQTASERVEAEGLAALHSLTAC R E V E R V 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 9 0 1065.5091 Q96T76 Q96T76 308 316 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.0021123 128.6 By MS/MS 5.5 1.12 1 1 1 1 4 3460600 3460600 0 4074 2261 4230 9865;9866;9867;9868 7066 7066 1 60733 0 EVFSMAGVVVR FVANLDYKVGWKKLKEVFSMAGVVVRADIL KKLKEVFSMAGVVVRADILEDKDGKSRGIG K E V V R A 1 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 4 0 0 11 0 1192.6274 P52272 P52272 222 232 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.00011687 159.28 By MS/MS 5 0 2 2 1229400 1229400 0 4075 982 4231;4232 9869;9870 7067;7068 7067 738 1 50534 0 EVFTSSSSSSSR HLSSQQASGQSYSSREVFTSSSSSSSRQTR SSREVFTSSSSSSSRQTRPILKEQSSSSFS R E V S R Q 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 7 1 0 0 1 0 0 12 0 1259.563 CON__P08779;P08779 CON__P08779 442 453 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.0036515 112.85 By MS/MS By MS/MS 5.8 2.86 1 1 1 2 1 1 2 1 3 7 1853200 914010 939170 + 4076 47 4233 9871;9872;9873;9874;9875;9876;9877;9878;9879;9880 7069;7070;7071;7072;7073;7074;7075;7076 7070 8 131960 3226400 EVGAFGTPVINLGTR AHAGCMIGNSSCGVREVGAFGTPVINLGTR EVGAFGTPVINLGTRQIGRETGENVLHVRD R E V T R Q 1 1 1 0 0 0 1 3 0 1 1 0 0 1 1 0 2 0 0 2 0 0 15 0 1529.8202 Q9Y223 Q9Y223 307 321 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 3.2639E-14 199.4 By MS/MS 6 0.816 1 1 1 3 3613400 3613400 0 4077 2862 4234 9881;9882;9883 7077 7077 1 114450 0 EVGDGTTSVVIIAAELLK PAAKVLCELADLQDKEVGDGTTSVVIIAAE DGTTSVVIIAAELLKNADELVKQKIHPTSV K E V L K N 2 0 0 1 0 0 2 2 0 2 2 1 0 0 0 1 2 0 0 3 0 0 18 0 1814.0037 P17987 P17987 85 102 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 2.9574E-07 155.39 By MS/MS 6 0 4 4 5689200 5689200 0 4078 619 4235 9884;9885;9886;9887 7078;7079;7080;7081 7079 4 44364 0 EVGDVIALSDITSSGAADR DYVSPLQLNGLGTPKEVGDVIALSDITSSG VIALSDITSSGAADRSQEPSPVGSRRGHVT K E V D R S 3 1 0 3 0 0 1 2 0 2 1 0 0 0 0 3 1 0 0 2 0 0 19 0 1874.9222 Q96CP6 Q96CP6 244 262 GRAMD1A GRAM domain-containing protein 1A yes yes 2 1.8178E-14 238.88 By MS/MS 4 0 1 1 449180 449180 0 4079 2138 4236 9888 7082 7082 1 12262 0 EVGEAFTILSDPK GASAEVQKEEEKKFKEVGEAFTILSDPKKK FKEVGEAFTILSDPKKKTRYDSGQDLDEEG K E V P K K 1 0 0 1 0 0 2 1 0 1 1 1 0 1 1 1 1 0 0 1 0 0 13 0 1404.7137 Q99615 Q99615 430 442 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.00011565 154.15 By MS/MS 7.25 1.48 1 1 1 1 4 1123100 1123100 0 4080 2276 4237 9889;9890;9891;9892 7083;7084;7085 7084 3 147020 0 EVGEAICTDPLVSK SGVYNVIPCSRKNAKEVGEAICTDPLVSKI KEVGEAICTDPLVSKISFTGSTTTGKILLH K E V S K I 1 0 0 1 1 0 2 1 0 1 1 1 0 0 1 1 1 0 0 2 0 0 14 0 1516.7443 P51649 P51649 266 279 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 2 0.00082818 126.71 By MS/MS 6.5 0.5 1 1 2 2927700 2927700 0 4081 973 4238 9893;9894 7086 7086 1 32723 0 EVGETLLYYGCR IGFIQERAWLRQQGKEVGETLLYYGCRRSD QGKEVGETLLYYGCRRSDEDYLYREELAQF K E V C R R 0 1 0 0 1 0 2 2 0 0 2 0 0 0 0 0 1 0 2 1 0 0 12 0 1458.6813 P16435 P16435 556 567 POR NADPH--cytochrome P450 reductase yes yes 2 8.5295E-05 192.26 By MS/MS 5 0 1 1 2422700 2422700 0 4082 607 4239 9895 7087 7087 1 99584 0 EVGNALLNVVLK HVTCVELMALAVSGKEVGNALLNVVLKSQP SGKEVGNALLNVVLKSQPLVPRENITAWMN K E V L K S 1 0 2 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 3 0 0 12 0 1267.75 Q9ULK4 Q9ULK4 1121 1132 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 2 1.6172E-05 173.39 By MS/MS 3 0 1 1 181200 181200 0 4083 2824 4240 9896 7088 7088 1 4730.3 0 EVIELPLTNPELFQR YSEIGGLSEQIRELREVIELPLTNPELFQR EVIELPLTNPELFQRVGIIPPKGCLLYGPP R E V Q R V 0 1 1 0 0 1 3 0 0 1 3 0 0 1 2 0 1 0 0 1 0 0 15 0 1796.9672 P62333 P62333 147 161 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.0002239 132.56 By MS/MS 7 0.816 1 1 1 3 2182200 2182200 0 4084 1133 4241 9897;9898;9899 7089;7090;7091;7092 7090 4 44943 0 EVIKTNNVSEHEDTDK VSSRNVEELVIVLKKEVIKTNNVSEHEDTD VIKTNNVSEHEDTDKYRQLLVRTLHSCSVR K E V D K Y 0 0 2 2 0 0 3 0 1 1 0 2 0 0 0 1 2 0 0 2 0 0 16 1 1856.8752 P53618 P53618 363 378 COPB1 Coatomer subunit beta yes yes 3 0.0042968 94.45 By MS/MS 4.5 0.5 1 1 2 730510 730510 0 4085 1004 4242 9900;9901 7093 7093 1 21809 0 EVIKTNNVSEHEDTDKYR VSSRNVEELVIVLKKEVIKTNNVSEHEDTD KTNNVSEHEDTDKYRQLLVRTLHSCSVRFP K E V Y R Q 0 1 2 2 0 0 3 0 1 1 0 2 0 0 0 1 2 0 1 2 0 0 18 2 2176.0396 P53618 P53618 363 380 COPB1 Coatomer subunit beta yes yes 3 0.01484 73.953 By MS/MS 4.5 0.5 1 1 2 1480400 1480400 0 4086 1004 4243 9902;9903 7094 7094 1 44566 0 EVINGNIK PEPELLPGAPLPPPKEVINGNIKTVTEYKI APLPPPKEVINGNIKTVTEYKIDEDGKKFK K E V I K T 0 0 2 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 0 1 0 0 8 0 885.49198 O75821 O75821 58 65 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.020267 106.42 By MS/MS 7 0 1 1 1658900 1658900 0 4087 330 4244 9904 7095 7095 1 29644 0 EVIPVNVPEAQEEMK VIDPVAPRYVALLKKEVIPVNVPEAQEEMK EVIPVNVPEAQEEMKEVAKHPKNPEVGLKP K E V M K E 1 0 1 0 0 1 4 0 0 1 0 1 1 0 2 0 0 0 0 3 0 0 15 0 1710.8498 P07814 P07814 514 528 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0031329 109.15 By MS/MS 3.33 0.471 2 1 3 3618500 3618500 0 4088 493 4245;4246 9905;9906;9907 7096;7097 7096 287 2 94624 0 EVITAQDTVIK KESVNKAQEEVTKQKEVITAQDTVIKAKYA TKQKEVITAQDTVIKAKYAEVAKHKEQNND K E V I K A 1 0 0 1 0 1 1 0 0 2 0 1 0 0 0 0 2 0 0 2 0 0 11 0 1215.6711 O95347 O95347 880 890 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 5.03E-16 228.98 By MS/MS 4 0.816 1 1 1 3 2961900 2961900 0 4089 385 4247 9908;9909;9910 7098 7098 1 80849 0 EVLADFQR CKQGLPAFRQSQPSREVLADFQRREPYKFL RQSQPSREVLADFQRREPYKFLQFAYFKAN R E V Q R R 1 1 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 976.49779 O75718 O75718 137 144 CRTAP Cartilage-associated protein yes yes 2 0.0030754 149.4 By MS/MS 7.5 0.5 1 1 2 2841500 2841500 0 4090 326 4248 9911;9912 7099 7099 1 75191 0 EVLAELEALER IRSYLTEQVNQDLPKEVLAELEALERRVHK DLPKEVLAELEALERRVHKM__________ K E V E R R 2 1 0 0 0 0 4 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 11 0 1270.6769 Q16822 Q16822 625 635 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 5.3979E-16 218.94 By MS/MS 5.5 0.5 1 1 2 2681900 2681900 0 4091 1550 4249 9913;9914 7100;7101 7101 2 46716 0 EVLDSFLDLAR ASVGAAGSAENAPSKEVLDSFLDLARNIFP APSKEVLDSFLDLARNIFPSNLVSAAFRSY K E V A R N 1 1 0 2 0 0 1 0 0 0 3 0 0 1 0 1 0 0 0 1 0 0 11 0 1276.6663 Q15758 Q15758 179 189 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 3.5379E-29 255.71 By MS/MS 4.12 1.9 1 1 1 1 2 1 1 8 33854000 33854000 0 4092 1518 4250 9915;9916;9917;9918;9919;9920;9921;9922 7102;7103;7104;7105;7106;7107;7108;7109;7110;7111 7110 10 951310 0 EVLEKLIEK PGASDLTGSFRLYRKEVLEKLIEKCVSKGY FRLYRKEVLEKLIEKCVSKGYVFQMEMIVR K E V E K C 0 0 0 0 0 0 3 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 9 1 1099.6489 O60762 O60762 193 201 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0032033 148.94 By MS/MS 8 0 1 1 8869200 8869200 0 4093 263 4251 9923 7112 7112 1 585100 0 EVLEKQPVLSQTEAR LATGYGAYLAQPLLREVLEKQPVLSQTEAR EVLEKQPVLSQTEARDLVERCMRVLYYRDA R E V A R D 1 1 0 0 0 2 3 0 0 0 2 1 0 0 1 1 1 0 0 2 0 0 15 1 1725.9261 P28070 P28070 197 211 PSMB4 Proteasome subunit beta type-4 yes yes 2;3 3.5143E-06 161.25 By MS/MS 9 0 2 2 8590000 8590000 0 4094 713 4252 9924;9925 7113;7114 7114 2 4929800 0 EVLELDSIR NKQDLPGALSSNAIREVLELDSIRSHHWCI SSNAIREVLELDSIRSHHWCIQGCSAVTGE R E V I R S 0 1 0 1 0 0 2 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1072.5764 P36404 P36404 140 148 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 5.9079E-08 199.68 By MS/MS 8.5 1.12 1 1 1 1 4 4306700 4306700 0 4095 802 4253 9926;9927;9928;9929 7115;7116 7115 2 2536800 0 EVLHALKEK LSQCKFDLLEELVAKEVLHALKEKVTSLPD EELVAKEVLHALKEKVTSLPDNHKNALAAN K E V E K V 1 0 0 0 0 0 2 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 9 1 1065.6182 Q8WWC4 Q8WWC4 174 182 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.017223 126.24 By MS/MS 9 0 1 1 381010 381010 0 4096 2037 4254 9930 7117 7117 1 218660 0 EVLLASQKTDAEATDTEATET MMITNAERLRRKRAREVLLASQKTDAEATD QKTDAEATDTEATET_______________ R E V E T - 4 0 0 2 0 1 4 0 0 0 2 1 0 0 0 1 5 0 0 1 0 0 21 1 2222.0438 Q9Y3D3 Q9Y3D3 117 137 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 1.368E-75 302.35 By MS/MS 10 0 1 1 3822100 3822100 0 4097 2930 4255 9931 7118 7118 1 4062500 0 EVLLEAQDMAVR AQLEFNDKKGAKIIKEVLLEAQDMAVRDHN IIKEVLLEAQDMAVRDHNVEFRSNLYIAES K E V V R D 2 1 0 1 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 2 0 0 12 0 1372.7021 Q9NWU5 Q9NWU5 113 124 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 5.4297E-34 269.33 By MS/MS 9 0 2 2 1385900 1385900 0 4098 2670 4256;4257 9932;9933 7119;7120 7119 1573 2 795400 0 EVLLQTFLDDTSPGDK AIQALRKMELSDEVREVLLQTFLDDTSPGD VLLQTFLDDTSPGDKRLAAYLMLMGSPSQS R E V D K R 0 0 0 3 0 1 1 1 0 0 3 1 0 1 1 1 2 0 0 1 0 0 16 0 1776.8782 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 539 554 yes yes 2 0.00048141 122.78 By MS/MS 5 0 1 1 83895 83895 0 + 4099 31 4258 9934 7121;7122 7122 2 3448.4 0 EVLNEEDEVQPNGK YAKNKFKNKRLLGTREVLNEEDEVQPNGKI REVLNEEDEVQPNGKIFKKVILGQYNWLSY R E V G K I 0 0 2 1 0 1 4 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 14 0 1598.7424 O95573 O95573 109 122 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 5.158E-35 256.31 By MS/MS By matching 3.8 1.94 1 1 2 1 4 1 3168600 3154900 13692 4100 400 4259 9935;9936;9937;9938;9939 7123;7124;7125 7123 3 101800 40515 EVLQLQEEVK RKAEEVQAWAQRKEREVLQLQEEVKNFITR QRKEREVLQLQEEVKNFITRENLEARVEAA R E V V K N 0 0 0 0 0 2 3 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 10 0 1213.6554 Q9BYN8 Q9BYN8 156 165 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 1.4879E-74 329.05 By MS/MS 9 0 1 1 4463900 4463900 0 4101 2417 4260 9940 7126 7126 1 2561900 0 EVLSLLQEK AARDSIVREVIQNSKEVLSLLQEKNPAFKP VIQNSKEVLSLLQEKNPAFKPVLAIIQAGD K E V E K N 0 0 0 0 0 1 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 9 0 1057.6019 Q6UB35 Q6UB35 84 92 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0010268 141.52 By MS/MS 4 0 1 1 3676200 3676200 0 4102 1726 4261 9941 7127 7127 1 100360 0 EVLVLGLDGAGK DEEDEEPALEELEQREVLVLGLDGAGKSTF EQREVLVLGLDGAGKSTFLRVLSGKPPLEG R E V G K S 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 0 0 0 0 2 0 0 12 0 1169.6656 Q8N8L6 Q8N8L6 79 90 ARL10 ADP-ribosylation factor-like protein 10 yes yes 2 0.00033415 171.85 By MS/MS 8.5 0.5 1 1 2 1045900 1045900 0 4103 1932 4262 9942;9943 7128 7128 1 113470 0 EVMIGSFHETVWR E V W R 0 1 0 0 0 0 2 1 1 1 0 0 1 1 0 1 1 1 0 2 0 0 13 0 1589.766 REV__Q6ZMI3 yes yes 2 0.040651 68.846 By MS/MS 5 0 2 2 1639500 1639500 0 + 4104 3033 4263 9944;9945 7129 7129 1745 1 67392 0 EVMLILIR LIPLMDAEYANYYTREVMLILIREFQSPDE YANYYTREVMLILIREFQSPDEEMKKIVLK R E V I R E 0 1 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 0 0 1 0 0 8 0 985.59942 O75533 O75533 768 775 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0033045 147.69 By MS/MS 3.33 0.471 2 1 3 1288100 1288100 0 4105 315 4264;4265 9946;9947;9948 7130;7131 7131 174 2 33674 0 EVMLVGIGDK KQMKSEVATLTAAGKEVMLVGIGDKIRGIL TAAGKEVMLVGIGDKIRGILYRTHSDQFLV K E V D K I 0 0 0 1 0 0 1 2 0 1 1 1 1 0 0 0 0 0 0 2 0 0 10 0 1059.5634 P36542 P36542 127 136 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.00042116 140.45 By MS/MS 8.5 0.5 1 1 2 4532600 4532600 0 4106 805 4266 9949;9950 7132;7133 7133 551 2 562940 0 EVMLVGIGDKIR KQMKSEVATLTAAGKEVMLVGIGDKIRGIL AGKEVMLVGIGDKIRGILYRTHSDQFLVAF K E V I R G 0 1 0 1 0 0 1 2 0 2 1 1 1 0 0 0 0 0 0 2 0 0 12 1 1328.7486 P36542 P36542 127 138 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.0053417 160.18 By MS/MS By matching 8.67 0.745 3 2 1 5 1 18089000 18062000 26890 4107 805 4267;4268 9951;9952;9953;9954;9955;9956 7134;7135 7135 551 2 2003400 229410 EVMPLLLAYLK QFSENLQPHISSYSREVMPLLLAYLKSVPL SYSREVMPLLLAYLKSVPLGHTHHLAKACY R E V L K S 1 0 0 0 0 0 1 0 0 0 4 1 1 0 1 0 0 0 1 1 0 0 11 0 1288.7465 Q8TEX9 Q8TEX9 435 445 IPO4 Importin-4 yes yes 2 9.0835E-05 157.68 By MS/MS 4 0.816 1 1 1 3 1006500 1006500 0 4108 2005 4269 9957;9958;9959 7136;7137 7137 1314 2 28063 0 EVNIVLPTQSIVPR GITKENCILNLLTEKEVNIVLPTQSIVPRT KEVNIVLPTQSIVPRTFVLKPGMVLFLGAI K E V P R T 0 1 1 0 0 1 1 0 0 2 1 0 0 0 2 1 1 0 0 3 0 0 14 0 1563.8984 Q8NC60 Q8NC60 514 527 NOA1 Nitric oxide-associated protein 1 yes yes 2 8.0879E-07 176.18 By MS/MS 5 0 1 1 277590 277590 0 4109 1951 4270 9960 7138 7138 1 11410 0 EVNLWCPTLK HLIVVPASTIDNWLREVNLWCPTLKVLCYY DNWLREVNLWCPTLKVLCYYGSQEERKQIR R E V L K V 0 0 1 0 1 0 1 0 0 0 2 1 0 0 1 0 1 1 0 1 0 0 10 0 1258.638 Q9H4L7 Q9H4L7 563 572 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 0.00014663 160.36 By MS/MS 3.5 0.5 1 1 2 897900 897900 0 4110 2502 4271 9961;9962 7139 7139 1 23673 0 EVNTVLADVIK AEVWVEYTCKHFTKREVNTVLADVIKHMTP FTKREVNTVLADVIKHMTPDRAFEDSYPQL R E V I K H 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 3 0 0 11 0 1199.6762 Q7Z3J2 Q7Z3J2 521 531 C16orf62 UPF0505 protein C16orf62 yes yes 2 5.646E-11 208.15 By MS/MS 3.5 0.5 1 1 2 847520 847520 0 4111 1784 4272 9963;9964 7140 7140 1 23064 0 EVPEHITEEELK AATREFIEMWRLLGREVPEHITEEELKTLM LGREVPEHITEEELKTLMECVSNTAKKKYL R E V L K T 0 0 0 0 0 0 5 0 1 1 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1451.7144 Q7L0Y3 Q7L0Y3 107 118 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.00026911 167.09 By MS/MS 7 0 1 1 6788700 6788700 0 4112 1761 4273 9965 7141 7141 1 121320 0 EVPGSEAARPEQEPPVAEPVPVCTIFSQR AAPSSGGAPRQDAAREVPGSEAARPEQEPP PVAEPVPVCTIFSQRAPPASGDGFEPQMVK R E V Q R A 3 2 0 0 1 2 5 1 0 1 0 0 0 1 6 2 1 0 0 4 0 0 29 1 3175.5608 Q8WVT3 Q8WVT3 138 166 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 3 0.0034768 51.619 By MS/MS 4 0 1 1 488670 488670 0 4113 2034 4274 9966 7142 7142 1 13340 0 EVPQDQHLEAPADQSK SVRPQTALEENETQKEVPQDQHLEAPADQS VPQDQHLEAPADQSKGLLPP__________ K E V S K G 2 0 0 2 0 3 2 0 1 0 1 1 0 0 2 1 0 0 0 1 0 0 16 0 1790.8435 Q9Y3D9 Q9Y3D9 170 185 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 3.2988E-10 184.34 By MS/MS 9 0 1 1 576290 576290 0 4114 2935 4275 9967 7143 7143 1 330740 0 EVQDGIAPR PVPESGDGERVPEQKEVQDGIAPRMFKALI RVPEQKEVQDGIAPRMFKALIGKGHPEFST K E V P R M 1 1 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 983.50361 P45974 P45974 407 415 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.00022481 162.49 By MS/MS 4 0 1 1 768160 768160 0 4115 873 4276 9968 7144 7144 1 20970 0 EVQDLFEAQGNDR RRAATECMCNLAMSKEVQDLFEAQGNDRLK SKEVQDLFEAQGNDRLKLLVLYSGEDDELL K E V D R L 1 1 1 2 0 2 2 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 13 0 1519.6903 Q9H3U1 Q9H3U1 807 819 UNC45A Protein unc-45 homolog A yes yes 2 1.4758E-34 252.96 By MS/MS 4.5 0.5 1 1 2 5884000 5884000 0 4116 2493 4277 9969;9970 7145 7145 1 168230 0 EVQDLFEAQGNDRLK RRAATECMCNLAMSKEVQDLFEAQGNDRLK EVQDLFEAQGNDRLKLLVLYSGEDDELLQR K E V L K L 1 1 1 2 0 2 2 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 15 1 1760.8693 Q9H3U1 Q9H3U1 807 821 UNC45A Protein unc-45 homolog A yes yes 2 1.4616E-13 205.31 By MS/MS 4 0 1 1 832750 832750 0 4117 2493 4278 9971 7146 7146 1 22733 0 EVQDLTVR LAERALRVKAVKLEKEVQDLTVRYQRAIAD KAVKLEKEVQDLTVRYQRAIADCENIRRRT K E V V R Y 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 8 0 958.50836 Q8TAA5 Q8TAA5 72 79 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.010733 118.74 By MS/MS 8.5 1.12 1 1 1 1 4 2321700 2321700 0 4118 1979 4279 9972;9973;9974;9975 7147 7147 1 892310 0 EVQETTVTEGAAK AMENGTGPYGEERPREVQETTVTEGAAKIA PREVQETTVTEGAAKIAFPSANEVFYNPVQ R E V A K I 2 0 0 0 0 1 3 1 0 0 0 1 0 0 0 0 3 0 0 2 0 0 13 0 1361.6674 Q9NXH9 Q9NXH9 51 63 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 0.0047285 112.64 By MS/MS 5 0 1 1 589160 589160 0 4119 2688 4280 9976 7148 7148 1 24217 0 EVQLAQIFEPLSR AKQAVHCIHAIFTNKEVQLAQIFEPLSRSL NKEVQLAQIFEPLSRSLNADVPEQLITPLV K E V S R S 1 1 0 0 0 2 2 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 13 0 1528.8249 Q29RF7 Q29RF7 751 763 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.0018444 120.96 By MS/MS 3.5 0.5 1 1 2 321860 321860 0 4120 1556 4281 9977;9978 7149 7149 1 8545.2 0 EVQLEELEAAR QCEEVARALGKESLREVQLEELEAARDLVS ESLREVQLEELEAARDLVSKEGFRRARHVV R E V A R D 2 1 0 0 0 1 4 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1285.6514 P51570 P51570 257 267 GALK1 Galactokinase yes yes 2 5.646E-11 208.15 By MS/MS 7 0 1 1 6967600 6967600 0 4121 967 4282 9979 7150 7150 1 124510 0 EVQPDVVVVELCQYR HFSDDSKRDVVKTIREVQPDVVVVELCQYR EVQPDVVVVELCQYRVSMLKMDESTLLREA R E V Y R V 0 1 0 1 1 2 2 0 0 0 1 0 0 0 1 0 0 0 1 5 0 0 15 0 1831.9138 Q9H4I3 Q9H4I3 97 111 TRABD TraB domain-containing protein yes yes 2 6.7911E-10 184.87 By MS/MS 7 0 1 1 413410 413410 0 4122 2500 4283 9980 7151 7151 1 7387.7 0 EVQTNDLK QVRQIRKKMMEIMTREVQTNDLKEVVNKLI MMEIMTREVQTNDLKEVVNKLIPDSIGKDI R E V L K E 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 945.47673 P61247 P61247 175 182 RPS3A 40S ribosomal protein S3a yes yes 2 0.010733 118.74 By MS/MS By matching 8 0 2 1 1 2945900 2782600 163260 4123 1094 4284 9981;9982 7152 7152 1 183570 1392800 EVQTNDLKEVVNK QVRQIRKKMMEIMTREVQTNDLKEVVNKLI TREVQTNDLKEVVNKLIPDSIGKDIEKACQ R E V N K L 0 0 2 1 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 3 0 0 13 1 1514.794 P61247 P61247 175 187 RPS3A 40S ribosomal protein S3a yes yes 2 9.5399E-17 220.66 By MS/MS By matching 8.33 0.471 2 1 2 1 5641100 5596100 44982 4124 1094 4285 9983;9984;9985 7153 7153 1 400180 383750 EVQYLLNK LLSKDIEAKMMALDREVQYLLNKAKFTKPR KMMALDREVQYLLNKAKFTKPRPRPKDKNG R E V N K A 0 0 1 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 8 0 1005.5495 Q9Y4L1 Q9Y4L1 901 908 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.008849 122.74 By MS/MS 3 0 1 1 646760 646760 0 4125 2955 4286 9986 7154 7154 1 16884 0 EVSDGIIAPGYEEEALTILSK LSDVCDVPTAKIISREVSDGIIAPGYEEEA IAPGYEEEALTILSKKKNGNYCVLQMDQSY R E V S K K 2 0 0 1 0 0 4 2 0 3 2 1 0 0 1 2 1 0 1 1 0 0 21 0 2233.1366 P31939 P31939 336 356 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.0011571 92.265 By MS/MS 6 0 1 1 3682200 3682200 0 4126 757 4287 9987 7155 7155 1 28714 0 EVSFDVELPK NVVTTRAVNHANTAKEVSFDVELPKTAFIT ANTAKEVSFDVELPKTAFITNFTLTIDGVT K E V P K T 0 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 10 0 1161.5918 CON__Q0V8M9;Q06033 CON__Q0V8M9 76 85 ITIH3 Inter-alpha-trypsin inhibitor heavy chain H3 yes no 2 0.0067533 101.72 By MS/MS 9.5 0.5 1 1 2 1353700 1353700 0 + 4127 55 4288 9988;9989 7156 7156 1 832470 0 EVSFQSTGESEWK VGQEDEAESDIFSIREVSFQSTGESEWKDT IREVSFQSTGESEWKDTNYTLNTDSLDWAL R E V W K D 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 3 1 1 0 1 0 0 13 0 1512.6733 Q07021 Q07021 208 220 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2 8.7618E-35 260.22 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 4166300 4003200 163060 4128 1279 4289 9990;9991;9992;9993 7157;7158 7158 2 537140 1391100 EVSMDDHK GKKGKKDRDMDELKKEVSMDDHKLSLDELH DMDELKKEVSMDDHKLSLDELHRKYGTDLS K E V H K L 0 0 0 2 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 8 0 959.40185 P05023 P05023 38 45 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.054049 89.752 By MS/MS 1.5 0.5 1 1 2 266270 266270 0 4129 463 4290 9994;9995 7159 7159 1 13100 0 EVSPGAGTEVQDALER GGTGPWWAAGGRGPREVSPGAGTEVQDALE VSPGAGTEVQDALERALPELQQALSALKQA R E V E R A 2 1 0 1 0 1 3 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 16 0 1656.7955 Q6SZW1 Q6SZW1 52 67 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 1.0597E-14 203.88 By MS/MS 5 0 1 1 3848800 3848800 0 4130 1725 4291 9996 7160 7160 1 158200 0 EVTAAQVAR SIEECRNIIVQFGVREVTAAQVARVLGMMA VQFGVREVTAAQVARVLGMMARTHSGLTDG R E V A R V 3 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 9 0 943.50869 A5YKK6 A5YKK6 284 292 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00092147 143.89 By MS/MS 2 0 1 1 853900 853900 0 4131 19 4292 9997 7161 7161 1 42444 0 EVTFVPGLYK QQMWVYDEDVGINYREVTFVPGLYKIFDEI GINYREVTFVPGLYKIFDEILVNAADNKQR R E V Y K I 0 0 0 0 0 0 1 1 0 0 1 1 0 1 1 0 1 0 1 2 0 0 10 0 1151.6227 P11388;Q02880 P11388 74 83 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 2 0.00087604 128.61 By MS/MS 3 0 1 1 1269000 1269000 0 4132 553;1258 4293 9998 7162 7162 1 33127 0 EVTLLGQNVNSFR LPPRPPKVLGLQGLKEVTLLGQNVNSFRDN LKEVTLLGQNVNSFRDNSEVQFNSAVPTNL K E V F R D 0 1 2 0 0 1 1 1 0 0 2 0 0 1 0 1 1 0 0 2 0 0 13 0 1475.7732 Q96SZ6 Q96SZ6 310 322 CDK5RAP1 CDK5 regulatory subunit-associated protein 1 yes yes 2 3.6405E-05 163.46 By MS/MS 6 0 1 1 2294600 2294600 0 4133 2258 4294 9999 7163 7163 1 17893 0 EVVATLLPSAK LQVSEQSQRKALGRKEVVATLLPSAKEQQK LGRKEVVATLLPSAKEQQKEEEEKRLKEHL K E V A K E 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 1 1 0 0 2 0 0 11 0 1126.6598 Q9UJG1 Q9UJG1 112 122 MOSPD1 Motile sperm domain-containing protein 1 yes yes 2 0.0018904 121.73 By MS/MS 9 0 1 1 426390 426390 0 4134 2796 4295 10000 7164 7164 1 244710 0 EVVDYIIFGTVIQEVK RAALTGLLHRTSVPKEVVDYIIFGTVIQEV VVDYIIFGTVIQEVKTSNVAREAALGAGFS K E V V K T 0 0 0 1 0 1 2 1 0 3 0 1 0 1 0 0 1 0 1 4 0 0 16 0 1851.003 P55084 P55084 96 111 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 4.18E-06 150.14 By MS/MS 6 0 1 1 206950 206950 0 4135 1027 4296 10001 7165;7166 7165 2 1613.8 0 EVVEAHVDQK TAEAIKALGAKHCVKEVVEAHVDQKNKVVT KHCVKEVVEAHVDQKNKVVTTPAFMCETAL K E V Q K N 1 0 0 1 0 1 2 0 1 0 0 1 0 0 0 0 0 0 0 3 0 0 10 0 1152.5775 P0DPI2;A0A0B4J2D5 P0DPI2 224 233 yes no 2 3.8517E-05 172.59 By MS/MS 9 0.816 1 1 1 3 1987300 1987300 0 4136 4 4297 10002;10003;10004 7167 7167 1 761470 0 EVVETPLLHPER YSDVGGCKEQIEKLREVVETPLLHPERFVN KLREVVETPLLHPERFVNLGIEPPKGVLLF R E V E R F 0 1 0 0 0 0 3 0 1 0 2 0 0 0 2 0 1 0 0 2 0 0 12 0 1417.7565 P35998 P35998 189 200 PSMC2 26S protease regulatory subunit 7 yes yes 2 8.4511E-05 158.47 By MS/MS 7 0.816 1 1 1 3 4301900 4301900 0 4137 801 4298 10005;10006;10007 7168 7168 1 70285 0 EVVFVEDVK PKEEEKVNEEQWSLREVVFVEDVKNVPVGK EQWSLREVVFVEDVKNVPVGKVLKVDGAYV R E V V K N 0 0 0 1 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 4 0 0 9 0 1062.5597 O95071 O95071 655 663 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0091791 106.6 By MS/MS 2.5 1.12 1 1 1 1 4 1614400 1614400 0 4138 364 4299 10008;10009;10010;10011 7169;7170;7171;7172 7169 4 64062 0 EVVHTVSLHEIDVINSR TKFVQCPDGELQKRKEVVHTVSLHEIDVIN VHTVSLHEIDVINSRTQGFLALFSGDTGEI K E V S R T 0 1 1 1 0 0 2 0 2 2 1 0 0 0 0 2 1 0 0 4 0 0 17 0 1946.0221 Q9Y230 Q9Y230 237 253 RUVBL2 RuvB-like 2 yes yes 2;3 2.1745E-25 228.62 By MS/MS 6 0 2 2 47965000 47965000 0 4139 2864 4300 10012;10013 7173;7174 7173 2 374030 0 EVVIGTPTLK DALDPALRRPGRFDREVVIGTPTLKQRKEI GRFDREVVIGTPTLKQRKEILQVITSKMPI R E V L K Q 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 2 0 0 2 0 0 10 0 1055.6227 Q9BVQ7 Q9BVQ7 363 372 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 0.018874 93.143 By MS/MS 5 0 1 1 781640 781640 0 4140 2382 4301 10014 7175 7175 1 32129 0 EVVIVSATR IRYVERSYVSKPTLKEVVIVSATRTPIGSF SKPTLKEVVIVSATRTPIGSFLGSLSLLPA K E V T R T 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 3 0 0 9 0 972.5604 P24752 P24752 41 49 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 4.6552E-06 178.94 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 94732000 94585000 147550 4141 680 4302 10015;10016;10017;10018;10019 7176;7177;7178;7179 7176 4 2098900 605700 EVVNAIIESGK NTEIGPGTVCESAIKEVVNAIIESGKTLSR SAIKEVVNAIIESGKTLSREERKTERCPLL K E V G K T 1 0 1 0 0 0 2 1 0 2 0 1 0 0 0 1 0 0 0 2 0 0 11 0 1157.6292 Q9NS86 Q9NS86 226 236 LANCL2 LanC-like protein 2 yes yes 2 0.00041733 146.11 By MS/MS 7 0 1 1 719120 719120 0 4142 2621 4303 10020 7180 7180 1 12851 0 EVVNKDVLDVYIEHR FADAVQELLPQYKEREVVNKDVLDVYIEHR EVVNKDVLDVYIEHRLMMEQRSRDPGMVRS R E V H R L 0 1 1 2 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 4 0 0 15 1 1826.9527 P33993 P33993 92 106 MCM7 DNA replication licensing factor MCM7 yes yes 3 2.6033E-10 162.46 By MS/MS 5 0 1 1 985990 985990 0 4143 775 4304 10021 7181 7181 1 40528 0 EVVTEHLINK MVLHKHGEKLYTGLREVVTEHLINKVREDV YTGLREVVTEHLINKVREDVLNSLNNNFLQ R E V N K V 0 0 1 0 0 0 2 0 1 1 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1180.6452 Q13618 Q13618 79 88 CUL3 Cullin-3 yes yes 2 0.00077622 133.23 By MS/MS 5 0.816 1 1 1 3 1753900 1753900 0 4144 1389 4305 10022;10023;10024 7182 7182 1 52801 0 EVVTEIRDK HAALQDIGKNIYTIREVVTEIRDKATRRRL NIYTIREVVTEIRDKATRRRLAVLPYELRF R E V D K A 0 1 0 1 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 9 1 1087.5873 Q9ULX3 Q9ULX3 32 40 NOB1 RNA-binding protein NOB1 yes yes 2 0.015769 140.35 By MS/MS 7 0 1 1 0 0 0 4145 2829 4306 10025 7183 7183 1 0 0 EVVVYAPLSK RRLKSDVALEVPPKREVVVYAPLSKKQEIF VPPKREVVVYAPLSKKQEIFYTAIVNRTIA R E V S K K 1 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 1 3 0 0 10 0 1103.6227 Q9NRZ9 Q9NRZ9 465 474 HELLS Lymphoid-specific helicase yes yes 2 0.00058912 141.48 By MS/MS 4.5 0.5 1 1 2 3038100 3038100 0 4146 2619 4307 10026;10027 7184 7184 1 87740 0 EVWDYVFFK QAESPLGIRPQQMTKEVWDYVFFKEAPFPK PQQMTKEVWDYVFFKEAPFPKTQIAKEKLD K E V F K E 0 0 0 1 0 0 1 0 0 0 0 1 0 2 0 0 0 1 1 2 0 0 9 0 1231.5914 Q9P2J5 Q9P2J5 633 641 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0060578 113.41 By MS/MS 3.5 0.5 1 1 2 298030 298030 0 4147 2738 4308 10028;10029 7185 7185 1 7832.3 0 EVYEEAGVK GGMEPEEEPGGAAVREVYEEAGVKGKLGRL GGAAVREVYEEAGVKGKLGRLLGIFEQNQD R E V V K G 1 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 1 2 0 0 9 0 1022.492 A0A024RBG1;Q9NZJ9;Q8NFP7;Q96G61 A0A024RBG1 66 74 NUDT4;NUDT10;NUDT11 Diphosphoinositol polyphosphate phosphohydrolase 2;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha;Diphosphoinositol polyphosphate phosphohydrolase 3-beta no no 2 0.021626 95.815 By MS/MS 8.5 0.5 1 1 2 464700 464700 0 4148 0;1972;2178 4309 10030;10031 7186 7186 1 217120 0 EVYEEAGVKGK GGMEPEEEPGGAAVREVYEEAGVKGKLGRL AAVREVYEEAGVKGKLGRLLGIFEQNQDRK R E V G K L 1 0 0 0 0 0 3 2 0 0 0 2 0 0 0 0 0 0 1 2 0 0 11 1 1207.6085 A0A024RBG1;Q9NZJ9;Q8NFP7;Q96G61 A0A024RBG1 66 76 NUDT4;NUDT10;NUDT11 Diphosphoinositol polyphosphate phosphohydrolase 2;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha;Diphosphoinositol polyphosphate phosphohydrolase 3-beta no no 2 3.1497E-15 221.94 By MS/MS 9 0 1 1 489960 489960 0 4149 0;1972;2178 4310 10032 7187 7187 1 281190 0 EVYEGEVTELTPCETENPMGGYGK ENFRRAIGLRIKETKEVYEGEVTELTPCET LTPCETENPMGGYGKTISHVIIGLKTAKGT K E V G K T 0 0 1 0 1 0 6 4 0 0 1 1 1 0 2 0 3 0 2 2 0 0 24 0 2688.1571 Q9Y265 Q9Y265 129 152 RUVBL1 RuvB-like 1 yes yes 2 0.0042364 68.751 By MS/MS 6 0 1 1 3436800 3436800 0 4150 2870 4311 10033 7188 7188 1 26800 0 EVYELLDSPGK EVLNIGKKLYEGKTKEVYELLDSPGKVLLQ GKTKEVYELLDSPGKVLLQSKDQITAGNAA K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 P22234 P22234 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 8.9588E-07 179.81 By MS/MS 7.67 1.7 1 1 1 3 7941000 7941000 0 4151 656 4312 10034;10035;10036 7189;7190 7189 2 476410 0 EVYQQQQYGSGGR TVSGSKCEIKVAQPKEVYQQQQYGSGGRGN PKEVYQQQQYGSGGRGNRNRGNRGSGGGGG K E V G R G 0 1 0 0 0 4 1 3 0 0 0 0 0 0 0 1 0 0 2 1 0 0 13 0 1498.6801 Q99729 Q99729 233 245 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 2 2.4098E-25 241.39 By MS/MS 8.5 1.12 1 1 1 1 4 1604000 1604000 0 4152 2287 4313 10037;10038;10039;10040 7191;7192 7191 2 147630 0 EVYVPHPR KCLYALEEGIVRYTKEVYVPHPRNTEAVDL GIVRYTKEVYVPHPRNTEAVDLITRLPKGA K E V P R N 0 1 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 0 1 2 0 0 8 0 995.51886 Q9P0M9 Q9P0M9 102 109 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 0.0084118 124.37 By MS/MS 10 0 1 1 117810 117810 0 4153 2729 4314 10041 7193 7193 1 125220 0 EWLTELFQQSK LFLLCLQQLAKLQDREWLTELFQQSKVNMQ LQDREWLTELFQQSKVNMQKMLPEIDQNKD R E W S K V 0 0 0 0 0 2 2 0 0 0 2 1 0 1 0 1 1 1 0 0 0 0 11 0 1407.7034 P78344 P78344 688 698 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 1.6791E-07 192.64 By MS/MS 4 0 1 1 146770 146770 0 4154 1192 4315 10042 7194 7194 1 4006.6 0 EWQHEEFYR NTLQAIWMMDPKDVREWQHEEFYRYVAQAH DPKDVREWQHEEFYRYVAQAHDKPRYTLHY R E W Y R Y 0 1 0 0 0 1 3 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 9 0 1322.568 Q12931 Q12931 308 316 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.00030442 155.84 By MS/MS 5 0 1 1 1373200 1373200 0 4155 1316 4316 10043 7195 7195 1 56443 0 EWSGLLEELAR IGGDGSLTGANLFRKEWSGLLEELARNGQI LFRKEWSGLLEELARNGQIDKEAVQKYAYL K E W A R N 1 1 0 0 0 0 3 1 0 0 3 0 0 0 0 1 0 1 0 0 0 0 11 0 1301.6616 Q01813 Q01813 140 150 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 0.001593 125.71 By MS/MS 5 0.816 1 1 1 3 375740 375740 0 4156 1246 4317 10044;10045;10046 7196 7196 1 7990.4 0 EWYPSLATMQESLR WPSPEQLRELEAEEREWYPSLATMQESLRV REWYPSLATMQESLRVKQLAEEQKRREREQ R E W L R V 1 1 0 0 0 1 2 0 0 0 2 0 1 0 1 2 1 1 1 0 0 0 14 0 1709.8083 Q8TAE8 Q8TAE8 91 104 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.0013762 116.74 By MS/MS 9 0 1 1 234100 234100 0 4157 1980 4318 10047 7197 7197 1306 1 134350 0 EYAEDDNIYQQK NPLVSERLELSVLYKEYAEDDNIYQQKIKD LYKEYAEDDNIYQQKIKDLHKKYSYIRKTR K E Y Q K I 1 0 1 2 0 2 2 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 12 0 1514.6525 Q96FW1 Q96FW1 60 71 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 2 2.7351E-06 176.33 By MS/MS 8 0 1 1 1297700 1297700 0 4158 2173 4319 10048 7198 7198 1 85611 0 EYEAEGIAK PLLFLQNITGFMVGREYEAEGIAKDGAKMV GFMVGREYEAEGIAKDGAKMVAAVACAQVP R E Y A K D 2 0 0 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1008.4764 Q9HCC0 Q9HCC0 412 420 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.042535 98.458 By MS/MS 6 0 1 1 7628400 7628400 0 4159 2559 4320 10049 7199 7199 1 59487 0 EYELFEFR AAKRLAECVKQVITKEYELFEFRRTEVPPL VKQVITKEYELFEFRRTEVPPLLLILDRCD K E Y F R R 0 1 0 0 0 0 3 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 8 0 1131.5237 Q9NRW7 Q9NRW7 198 205 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.017601 109.86 By MS/MS 5 0 1 1 190730 190730 0 4160 2612 4321 10050 7200 7200 1 7839.6 0 EYEPEMGK VWQERNAENAIEALKEYEPEMGKVYRQDRK NAIEALKEYEPEMGKVYRQDRKSVQRIKAK K E Y G K V 0 0 0 0 0 0 3 1 0 0 0 1 1 0 1 0 0 0 1 0 0 0 8 0 981.41135 P16615;O14983;Q93084 P16615 121 128 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 0.014487 113.89 By MS/MS 2.5 1.12 1 1 1 1 4 1711600 1711600 0 4161 608 4322 10051;10052;10053;10054 7201 7201 1 65075 0 EYFQKVNQ TPDSPTIKPSPAASKEYFQKVNQ_______ PSPAASKEYFQKVNQ_______________ K E Y N Q - 0 0 1 0 0 2 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 8 1 1054.5084 P30048 P30048 249 256 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.012416 152.63 By MS/MS 8.5 0.5 1 1 2 452800 452800 0 4162 731 4323 10055;10056 7202 7202 1 182480 0 EYFSWEGAFQHVGK RKLDPGSEETQTLVREYFSWEGAFQHVGKA REYFSWEGAFQHVGKAFNQGKIFK______ R E Y G K A 1 0 0 0 0 1 2 2 1 0 0 1 0 2 0 1 0 1 1 1 0 0 14 0 1683.7682 P26641 P26641 415 428 EEF1G Elongation factor 1-gamma yes yes 2 1.5394E-05 163.9 By MS/MS 6.5 0.5 1 1 2 8434000 8434000 0 4163 700 4324 10057;10058 7203 7203 1 66236 0 EYGASPVLSQGVDPR RLPSFRFLLSYSIIKEYGASPVLSQGVDPR EYGASPVLSQGVDPRSTFYVLNPHNNLSST K E Y P R S 1 1 0 1 0 1 1 2 0 0 1 0 0 0 2 2 0 0 1 2 0 0 15 0 1573.7736 Q14674 Q14674 1932 1946 ESPL1 Separin yes yes 2 0.0084132 96.745 By MS/MS 2 0 1 1 140920 140920 0 4164 1439 4325 10059 7204 7204 1 7004.3 0 EYIPGQPPLSQSSDSSPTR CLLSLKAQYKEKTGKEYIPGQPPLSQSSDS GQPPLSQSSDSSPTRNSEPAGLETPEAKVL K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 P07814 P07814 871 889 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0018849 102.78 By MS/MS 3.5 0.5 1 1 2 4315300 4315300 0 4165 493 4326 10060;10061 7205 7205 1 113410 0 EYIPTVFDNYSAQSAVDGR KTCLLICYTTNAFPKEYIPTVFDNYSAQSA TVFDNYSAQSAVDGRTVNLNLWDTAGQEEY K E Y G R T 2 1 1 2 0 1 1 1 0 1 0 0 0 1 1 2 1 0 2 2 0 0 19 0 2130.9858 P84095 P84095 31 49 RHOG Rho-related GTP-binding protein RhoG yes yes 2 0.00019832 119.65 By MS/MS 9 0 1 1 446670 446670 0 4166 1217 4327 10062 7206 7206 1 256350 0 EYITPAQISK IAQKQLEVVHTLDGKEYITPAQISKEMRDE TLDGKEYITPAQISKEMRDELHVRGGRVNI K E Y S K E 1 0 0 0 0 1 1 0 0 2 0 1 0 0 1 1 1 0 1 0 0 0 10 0 1148.6077 O94874 O94874 55 64 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0067763 101.65 By MS/MS 5 0 1 1 1001000 1001000 0 4167 354 4328 10063 7207 7207 1 41145 0 EYIVGLSVETER KQEIAEAQQLITICREYIVGLSVETERKKL ICREYIVGLSVETERKKLPKETLEQQKRIC R E Y E R K 0 1 0 0 0 0 3 1 0 1 1 0 0 0 0 1 1 0 1 2 0 0 12 0 1393.7089 P53621 P53621 1059 1070 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 3.636E-05 188.99 By MS/MS 2.5 0.5 1 1 2 2022400 2022400 0 4168 1005 4329 10064;10065 7208;7209 7209 2 57938 0 EYLLGSTAEEK GLTTIAAHLVKQANKEYLLGSTAEEKAIVQ QANKEYLLGSTAEEKAIVQQWLEYRVTQVD K E Y E K A 1 0 0 0 0 0 3 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 11 0 1238.603 O43324 O43324 58 68 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 5.8823E-16 217.66 By MS/MS 9 0.816 1 1 1 3 2596100 2596100 0 4169 194 4330 10066;10067;10068 7210 7210 1 1524800 0 EYLLQYNDPNRR RAQAERLAIRAQLKREYLLQYNDPNRRGLI LKREYLLQYNDPNRRGLIENPALLRWAYAR R E Y R R G 0 2 2 1 0 1 1 0 0 0 2 0 0 0 1 0 0 0 2 0 0 0 12 1 1579.7743 O95168 O95168 46 57 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 0.02592 115.7 By MS/MS 10 0 1 1 498870 498870 0 4170 370 4331 10069 7211 7211 1 530240 0 EYLPFLNTLK DLVLMVAEKSQKDPKEYLPFLNTLKKMETN QKDPKEYLPFLNTLKKMETNYQRFTIDKYL K E Y L K K 0 0 1 0 0 0 1 0 0 0 3 1 0 1 1 0 1 0 1 0 0 0 10 0 1236.6754 O95163 O95163 916 925 IKBKAP Elongator complex protein 1 yes yes 2 0.011832 98.044 By MS/MS 3.5 0.5 1 1 2 165650 165650 0 4171 368 4332 10070;10071 7212;7213 7213 2 4386.6 0 EYLQQLR KDLFIWDLDLPSRRREYLQQLRKDVVETTR LDLPSRRREYLQQLRKDVVETTRSPESVSR R E Y L R K 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 948.50288 Q9P2P6 Q9P2P6 4307 4313 STARD9 StAR-related lipid transfer protein 9 yes yes 2 0.012094 148.21 By MS/MS By matching 9.33 0.471 2 1 2 1 6646500 6587600 58852 4172 2739 4333 10072;10073;10074 7214 7214 1 3830900 634260 EYLTTLGQR EAVILLQEIGVLDQREYLTTLGQRLAHIST GVLDQREYLTTLGQRLAHISTDPRLAKAIV R E Y Q R L 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 2 0 1 0 0 0 9 0 1079.5611 Q7L2E3 Q7L2E3 865 873 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 4.4615E-08 200.16 By MS/MS 3.5 0.5 1 1 2 5060400 5060400 0 4173 1763 4334 10075;10076 7215;7216 7215 2 133700 0 EYLVPELSSEVQSLWSK PSLADVSKLCIGIPKEYLVPELSSEVQSLW LVPELSSEVQSLWSKAADLFESEGAKVIEV K E Y S K A 0 0 0 0 0 1 3 0 0 0 3 1 0 0 1 4 0 1 1 2 0 0 17 0 1993.0044 Q9H0R6 Q9H0R6 284 300 QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 2 0.00043023 122.66 By MS/MS 6 0 1 1 280500 280500 0 4174 2456 4335 10077 7217 7217 1 2187.3 0 EYNEFAEVFLK ARLFERYGSPGNVSKEYNEFAEVFLKAFAV NVSKEYNEFAEVFLKAFAVGVQQVLLKVLY K E Y L K A 1 0 1 0 0 0 3 0 0 0 1 1 0 2 0 0 0 0 1 1 0 0 11 0 1387.666 O95373 O95373 284 294 IPO7 Importin-7 yes yes 2 4.3994E-23 250.92 By MS/MS 3.5 0.5 1 1 2 1414300 1414300 0 4175 388 4336 10078;10079 7218 7218 1 38537 0 EYNIGVLR QFEDKPALSKTEDRKEYNIGVLRHLQVIFG SKTEDRKEYNIGVLRHLQVIFGHLAASRLQ K E Y L R H 0 1 1 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 8 0 962.51853 Q93008;O00507 Q93008 1638 1645 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.055602 89.142 By MS/MS 2 0.816 1 1 1 3 716720 716720 0 4176 2096 4337 10080;10081;10082 7219 7219 1 28541 0 EYNLEQQR YTLCKQIGTLLAELREYNLEQQRRAQCETL TLLAELREYNLEQQRRAQCETLSPDGLPEE R E Y Q R R 0 1 1 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1078.5043 Q7Z6Z7 Q7Z6Z7 3647 3654 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 3.4912E-05 200.16 By MS/MS 1.5 0.5 1 1 2 285880 285880 0 4177 1803 4338 10083;10084 7220 7220 1 14070 0 EYPFILDAFQR EDYLPLKPRVGKAAKEYPFILDAFQREAIQ KAAKEYPFILDAFQREAIQCVDNNQSVLVS K E Y Q R E 1 1 0 1 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 11 0 1397.698 P42285 P42285 135 145 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 0.0036915 125.71 By MS/MS 4 0 1 1 246230 246230 0 4178 848 4339 10085 7221 7221 1 6721.8 0 EYPSEQIIVTEK CKASNRRPSVYLPTREYPSEQIIVTEKTNI PTREYPSEQIIVTEKTNILLRYLHQQWDKK R E Y E K T 0 0 0 0 0 1 3 0 0 2 0 1 0 0 1 1 1 0 1 1 0 0 12 0 1434.7242 Q9BW61 Q9BW61 40 51 DDA1 DET1- and DDB1-associated protein 1 yes yes 2 5.3686E-07 203.02 By MS/MS 10 0 1 1 521790 521790 0 4179 2389 4340 10086 7222 7222 1 554600 0 EYQAGDFEAAER KRMLSFQGLAELAHREYQAGDFEAAERHCM AHREYQAGDFEAAERHCMQLWRQEPDNTGV R E Y E R H 3 1 0 1 0 1 3 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 12 0 1384.5895 O15294 O15294 31 42 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 1.3433E-11 211.63 By MS/MS 4 0 1 1 974030 974030 0 4180 167 4341 10087 7223 7223 1 26590 0 EYQDAFLFNELKGETMDTS YSLFLDESRSTQYMKEYQDAFLFNELKGET AFLFNELKGETMDTS_______________ K E Y T S - 1 0 1 2 0 1 3 1 0 0 2 1 1 2 0 1 2 0 1 0 0 0 19 1 2236.9834 Q9Y230 Q9Y230 445 463 RUVBL2 RuvB-like 2 yes yes 2 1.8048E-83 324.84 By MS/MS 6 0 2 2 4350000 4350000 0 4181 2864 4342;4343 10088;10089 7224;7225 7225 1654 2 33921 0 EYQISAGDFPEVK ELISRLPEIYIQLQREYQISAGDFPEVKAM QREYQISAGDFPEVKAMQEQLENYDFTKFH R E Y V K A 1 0 0 1 0 1 2 1 0 1 0 1 0 1 1 1 0 0 1 1 0 0 13 0 1481.7038 Q9H223 Q9H223 348 360 EHD4 EH domain-containing protein 4 yes yes 2 0.00089628 150.14 By MS/MS 6 0.816 1 1 1 3 2522100 2522100 0 4182 2470 4344 10090;10091;10092 7226 7226 1 50399 0 EYQNEEDSLGGSR QLRAQQNLSWEEIAKEYQNEEDSLGGSRVV AKEYQNEEDSLGGSRVVVCDINKEMLKVGK K E Y S R V 0 1 1 1 0 1 3 2 0 0 1 0 0 0 0 2 0 0 1 0 0 0 13 0 1482.6223 Q5HYK3 Q5HYK3 154 166 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 3.5294E-59 303.33 By MS/MS 8 0 1 1 270570 270570 0 4183 1602 4345 10093 7227 7227 1 17850 0 EYQTQLIQR FNALFVRPHIRGAIREYQTQLIQRVKDDIE IRGAIREYQTQLIQRVKDDIESLHDKFKVQ R E Y Q R V 0 1 0 0 0 3 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1177.6091 Q14204 Q14204 603 611 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 4.0689E-08 204.27 By MS/MS 1.5 0.5 1 1 2 3981700 3981700 0 4184 1421 4346 10094;10095 7228;7229 7228 2 195260 0 EYSKEGWEYVK MTVMSALSVAPSKAREYSKEGWEYVKARTK SKAREYSKEGWEYVKARTK___________ R E Y V K A 0 0 0 0 0 0 3 1 0 0 0 2 0 0 0 1 0 1 2 1 0 0 11 1 1416.6561 Q5XKP0 Q5XKP0 104 114 QIL1 Protein QIL1 yes yes 2 4.4205E-21 236.92 By MS/MS 10 0 1 1 723650 723650 0 4185 1664 4347 10096 7230 7230 1 769170 0 EYTAAVEAK LILDDVAITELSFSREYTAAVEAKQVAQQE ELSFSREYTAAVEAKQVAQQEAQRAQFLVE R E Y A K Q 3 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 9 0 980.48148 Q99623 Q99623 192 200 PHB2 Prohibitin-2 yes yes 2 0.00026151 160.11 By MS/MS By matching 8.75 0.829 2 1 1 3 1 31358000 30871000 487060 4186 2277 4348 10097;10098;10099;10100 7231 7231 1 2135400 4155200 EYTDVYPEIIER KIPIKRSDMLKDIIKEYTDVYPEIIERAGY IIKEYTDVYPEIIERAGYSLEKVFGIQLKE K E Y E R A 0 1 0 1 0 0 3 0 0 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1525.73 Q9Y5V3;Q9UNF1 Q9UNF1 312 323 MAGED1;MAGED2 Melanoma-associated antigen D1;Melanoma-associated antigen D2 no no 2 5.7654E-05 164.33 By MS/MS 4.5 0.5 1 1 2 2436300 2436300 0 4187 2840;2982 4349 10101;10102 7232;7233 7233 2 80864 0 EYVAYSHTGR SGKQRYSYQYTVANKEYVAYSHTGRIIPAI TVANKEYVAYSHTGRIIPAIWFRYDLSPIT K E Y G R I 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 2 1 0 0 10 0 1181.5465 Q969X5 Q969X5 215 224 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2 0.00044034 148.94 By MS/MS 7.5 0.5 1 1 2 1112000 1112000 0 4188 2110 4350 10103;10104 7234 7234 1 56818 0 FAAATGATPIAGR SVISSRNTGQRAVLKFAAATGATPIAGRFT LKFAAATGATPIAGRFTPGTFTNQIQAAFR K F A G R F 5 1 0 0 0 0 0 2 0 1 0 0 0 1 1 0 2 0 0 0 0 0 13 0 1202.6408 P08865 P08865 90 102 RPSA 40S ribosomal protein SA yes yes 2 9.7041E-35 259.08 By MS/MS By MS/MS 7.5 1.5 2 2 1 1 4 2 40540000 39761000 779290 4189 509 4351 10105;10106;10107;10108;10109;10110 7235;7236;7237;7238;7239 7237 4 1291200 3140900 FAADIISVLAMTMSGER LKEIYENMAPGENKRFAADIISVLAMTMSG ADIISVLAMTMSGERECLKYRLVGSQEELA R F A E R E 3 1 0 1 0 0 1 1 0 2 1 0 2 1 0 2 1 0 0 1 0 0 17 0 1810.8957 Q13200 Q13200 121 137 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.00068328 112.44 By MS/MS 4 0 1 1 65706 65706 0 4190 1347 4352 10111 7240 7240 1054;1055 1 1793.7 0 FAAKGEGQLGPAER WAFTLKQFAEMYVAKFAAKGEGQLGPAERA KFAAKGEGQLGPAERAKKVEDMMKKLWGDR K F A E R A 3 1 0 0 0 1 2 3 0 0 1 1 0 1 1 0 0 0 0 0 0 0 14 1 1429.7314 P13639 P13639 236 249 EEF2 Elongation factor 2 yes yes 2 0.034092 118.76 By MS/MS 4.5 0.5 1 1 2 713860 713860 0 4191 576 4353 10112;10113 7241 7241 1 20734 0 FAANINKESIVDVEGVVR ALVAVGDHASKQMVKFAANINKESIVDVEG NINKESIVDVEGVVRKVNQKIGSCTQQDVE K F A V R K 2 1 2 1 0 0 2 1 0 2 0 1 0 1 0 1 0 0 0 4 0 0 18 1 1959.0425 P14868 P14868 104 121 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 8.7705E-05 127.3 By MS/MS 6 0 1 1 10547000 10547000 0 4192 594 4354 10114 7242 7242 1 82243 0 FACHSASLTVR ELDNMPLRGKQLRVRFACHSASLTVRNLPQ LRVRFACHSASLTVRNLPQYVSNELLEEAF R F A V R N 2 1 0 0 1 0 0 0 1 0 1 0 0 1 0 2 1 0 0 1 0 0 11 0 1247.6081 Q15233 Q15233 143 153 NONO Non-POU domain-containing octamer-binding protein yes yes 3 0.0034706 123.51 By MS/MS 6 0 1 1 1880500 1880500 0 4193 1487 4355 10115 7243 7243 1 14664 0 FAEAFEAIPR YGETCPGLEQYAIKKFAEAFEAIPRALAEN YAIKKFAEAFEAIPRALAENSGVKANEVIS K F A P R A 3 1 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 10 0 1149.5819 P50990 P50990 441 450 CCT8 T-complex protein 1 subunit theta yes yes 2 3.922E-07 190.62 By MS/MS By MS/MS 5.4 2.84 1 1 1 1 1 2 1 1 1 9 1 378520000 378360000 157030 4194 955 4356 10116;10117;10118;10119;10120;10121;10122;10123;10124;10125 7244;7245;7246;7247;7248;7249;7250;7251;7252;7253 7245 10 9610600 481600 FAEALGSTEAK ITKLRKMVDQLFCKKFAEALGSTEAKAVPY FCKKFAEALGSTEAKAVPYQKFEAHPNDLY K F A A K A 3 0 0 0 0 0 2 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 11 0 1122.5557 P78347 P78347 478 488 GTF2I General transcription factor II-I yes yes 2 3.7653E-07 204.52 By MS/MS 4 0.816 1 1 1 3 7419600 7419600 0 4195 1194 4357 10126;10127;10128 7254 7254 1 199490 0 FAEFQYLQPGPPR AQTGIDLSGCTKWWRFAEFQYLQPGPPRRL WRFAEFQYLQPGPPRRLQTVVVYLPDVWTI R F A P R R 1 1 0 0 0 2 1 1 0 0 1 0 0 2 3 0 0 0 1 0 0 0 13 0 1548.7725 Q8N163 Q8N163 405 417 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 5.6985E-06 174.77 By MS/MS 3.5 0.5 1 1 2 1856300 1856300 0 4196 1895 4358 10129;10130 7255 7255 1 48814 0 FAEMEER GDEEKSRKRKNKDPKFAEMEERFYRYGIKP KRKNKDPKFAEMEERFYRYGIKPEWMMIHR K F A E R F 1 1 0 0 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 7 0 910.38547 Q14839 Q14839 605 611 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.050256 101.28 By MS/MS 2 0 1 1 245440 245440 0 4197 1449 4359 10131 7256 7256 1 12200 0 FAETQPK EVKLCEKMAQFDAKKFAETQPKKDTPRKEK MAQFDAKKFAETQPKKDTPRKEKGSREEKQ K F A P K K 1 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 7 0 819.41267 P26641 P26641 221 227 EEF1G Elongation factor 1-gamma yes yes 2 0.012279 147.69 By MS/MS By matching 6.33 0.471 2 1 2 1 27479000 27457000 22192 4198 700 4360 10132;10133;10134 7257;7258 7258 2 292270 68060 FAFDYATKK CLKIVTRAKSQRIAKFAFDYATKKGRGKVT SQRIAKFAFDYATKKGRGKVTAVHKANIMK K F A K K G 2 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 1 0 1 0 0 0 9 1 1089.5495 O43837 O43837 200 208 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2 0.010875 121.09 By MS/MS 7 0 1 1 2914200 2914200 0 4199 230 4361 10135 7259 7259 1 52077 0 FAFQAEVNR LNASQIRELREKSEKFAFQAEVNRMMKLII REKSEKFAFQAEVNRMMKLIINSLYKNKEI K F A N R M 2 1 1 0 0 1 1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 9 0 1080.5352 P14625 P14625 76 84 HSP90B1 Endoplasmin yes yes 2 0.00026952 159.58 By MS/MS 4 0 1 1 4451100 4451100 0 4200 589 4362 10136 7260 7260 1 121510 0 FAGVVPPVAGPWLGVEWDNPER IGRRVEVNGEHATVRFAGVVPPVAGPWLGV VAGPWLGVEWDNPERGKHDGSHEGTVYFKC R F A E R G 2 1 1 1 0 0 2 3 0 0 1 0 0 1 4 0 0 2 0 4 0 0 22 0 2391.2012 Q15813 Q15813 25 46 TBCE Tubulin-specific chaperone E yes yes 2 0.0030015 78.401 By MS/MS 6 0 1 1 258640 258640 0 4201 1524 4363 10137 7261 7261 1 2016.9 0 FAHNVVTTR IEVYSTKVNCKVTSRFAHNVVTTRAVNHAN CKVTSRFAHNVVTTRAVNHANTAKEVSFDV R F A T R A 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 2 0 0 9 0 1043.5512 CON__Q0V8M9 CON__Q0V8M9 58 66 yes yes 2;3 0.0078781 109.44 By MS/MS 9 0.707 1 2 1 4 4642600 4642600 0 + 4202 55 4364 10138;10139;10140;10141 7262;7263 7263 2 2649900 0 FAIQDISVEETSAK NAKMTLGMIWTIILRFAIQDISVEETSAKE RFAIQDISVEETSAKEGLLLWCQRKTAPYK R F A A K E 2 0 0 1 0 1 2 0 0 2 0 1 0 1 0 2 1 0 0 1 0 0 14 0 1536.7672 P12814;Q08043;P35609;O43707 O43707 153 166 ACTN1;ACTN3;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-2;Alpha-actinin-4 no no 2 2.32E-35 264.3 By MS/MS 4.5 0.5 1 1 2 3975300 3975300 0 4203 217;568 4365 10142;10143 7264 7264 1 111460 0 FAIYETVR LSASLCRQMTYSLTRFAIYETVRDRVAKGS MTYSLTRFAIYETVRDRVAKGSQGPLPFHE R F A V R D 1 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 8 0 997.52328 Q9UBX3 Q9UBX3 79 86 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.0094613 120.46 By MS/MS 8.5 1.12 1 1 1 1 4 21066000 21066000 0 4204 2761 4366 10144;10145;10146;10147 7265;7266 7265 2 2176900 0 FAIYETVRDR LSASLCRQMTYSLTRFAIYETVRDRVAKGS YSLTRFAIYETVRDRVAKGSQGPLPFHEKV R F A D R V 1 2 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 10 1 1268.6513 Q9UBX3 Q9UBX3 79 88 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.043751 104.44 By MS/MS 8 0.816 1 1 1 3 12100000 12100000 0 4205 2761 4367 10148;10149;10150 7267 7267 1 1200400 0 FALEVPGLR HVLEGLAASGLRSIRFALEVPGLRSVVAND GLRSIRFALEVPGLRSVVANDASTRAVDLI R F A L R S 1 1 0 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 0 1 0 0 9 0 1000.5706 Q9NXH9 Q9NXH9 170 178 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 0.0050099 120.46 By MS/MS 5 0 1 1 190020 190020 0 4206 2688 4368 10151 7268 7268 1 7810.7 0 FALPQYLK NRLNFLKKISQRYQKFALPQYLKTVYQHQK ISQRYQKFALPQYLKTVYQHQKAMKPWIQP K F A L K T 1 0 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 0 8 0 978.55385 CON__P02663 CON__P02663 174 181 yes yes 2 0.036889 94.262 By MS/MS 5 0 1 1 603030 603030 0 + 4207 38 4369 10152 7269 7269 1 24787 0 FANSFIPK NLASTRKYFTQFCVKFANSFIPKFITHLFK FTQFCVKFANSFIPKFITHLFKCKPISMVG K F A P K F 1 0 1 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 0 8 0 922.49125 Q5VIR6 Q5VIR6 670 677 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0093028 121.05 By MS/MS 4.5 0.5 1 1 2 726520 726520 0 4208 1645 4370 10153;10154 7270 7270 1 21651 0 FAPGGVGDSGPGEEQR VADSECRAELKDYLRFAPGGVGDSGPGEEQ APGGVGDSGPGEEQRESRARRGPRGPSAFI R F A Q R E 1 1 0 1 0 1 2 5 0 0 0 0 0 1 2 1 0 0 0 1 0 0 16 0 1558.7012 P58004 P58004 18 33 SESN2 Sestrin-2 yes yes 2 0.034128 72.891 By MS/MS 6 0 1 1 1793600 1793600 0 4209 1058 4371 10155 7271 7271 1 13986 0 FAQALGLTEAVK ITKLRKQVEEIFNLKFAQALGLTEAVKVPY NLKFAQALGLTEAVKVPYPVFESNPEFLYV K F A V K V 3 0 0 0 0 1 1 1 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1246.6921 P78347 P78347 583 594 GTF2I General transcription factor II-I yes yes 2 7.1351E-11 199.68 By MS/MS 3.5 0.5 1 1 2 6500400 6500400 0 4210 1194 4372 10156;10157 7272 7272 1 170420 0 FAQDVSQDDLIR TLEELHQQVLKGRGKFAQDVSQDDLIRAIK RGKFAQDVSQDDLIRAIKKLKALGTGFGII K F A I R A 1 1 0 3 0 2 0 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 12 0 1405.6838 Q96H20 Q96H20 135 146 SNF8 Vacuolar-sorting protein SNF8 yes yes 2 0.00027305 149.23 By MS/MS 8 0 1 1 634650 634650 0 4211 2187 4373 10158 7273 7273 1 41868 0 FAQILTR LSDANLSRYGIHPAKFAQILTRDPQVNAFA RYGIHPAKFAQILTRDPQVNAFAIFIGSLG K F A T R D 1 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 7 0 847.49159 A3KMH1 A3KMH1 1844 1850 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.038599 109.01 By MS/MS 2 0 1 1 273700 273700 0 4212 13 4374 10159 7274 7274 1 13604 0 FAQIVQK CVDRFIDTTLAITSRFAQIVQKGGQ_____ TTLAITSRFAQIVQKGGQ____________ R F A Q K G 1 0 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 7 0 832.48069 Q9Y5J9 Q9Y5J9 74 80 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 0.0066588 170.43 By MS/MS 10 0 1 1 1487600 1487600 0 4213 2970 4375 10160 7275 7275 1 1581200 0 FAQLALER PEDSDMPDHDLEPPRFAQLALERVLQDWNA HDLEPPRFAQLALERVLQDWNALKSMIMFG R F A E R V 2 1 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 946.52362 O95071 O95071 1324 1331 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0089094 122.52 By MS/MS 1.5 0.5 1 1 2 1594400 1594400 0 4214 364 4376 10161;10162 7276;7277 7276 2 78360 0 FAQQHQAR LIRHFRPELEERMQRFAQQHQARQAAS___ LEERMQRFAQQHQARQAAS___________ R F A A R Q 2 1 0 0 0 3 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 8 0 984.48896 P49821 P49821 453 460 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.0026418 152.63 By MS/MS 6.5 0.5 1 1 2 1071100 1071100 0 4215 936 4377 10163;10164 7278 7278 1 15914 0 FAQVLEK MAAVASPTGNCDLERFAQVLEKELPLYARP TGNCDLERFAQVLEKELPLYARPIFLRLLP R F A E K E 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 833.4647 Q6P1M0 Q6P1M0 565 571 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.016075 137.18 By MS/MS 1.5 0.5 1 1 2 1013900 1013900 0 4216 1701 4378 10165;10166 7279 7279 1 49699 0 FAQVSDPTVGVDFFSR TVGKSCLIRRFTEGRFAQVSDPTVGVDFFS AQVSDPTVGVDFFSRLVEIEPGKRIKLQIW R F A S R L 1 1 0 2 0 1 0 1 0 0 0 0 0 3 1 2 1 0 0 3 0 0 16 0 1770.8577 Q96DA2 Q96DA2 33 48 RAB39B Ras-related protein Rab-39B yes yes 2 1.2641E-06 155.98 By MS/MS 9 0 1 1 325660 325660 0 4217 2148 4379 10167 7280 7280 1 186900 0 FASASIK AIIGKKGQHIKQLSRFASASIKIAPPETPD QHIKQLSRFASASIKIAPPETPDSKVRMVI R F A I K I 2 0 0 0 0 0 0 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 7 0 722.39629 Q9NZI8 Q9NZI8 434 440 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.031113 114.19 By MS/MS 4.5 0.5 1 1 2 2167900 2167900 0 4218 2711 4380 10168;10169 7281 7281 1 88307 0 FASEAEDKIR VYLTNSLELEHIEVKFASEAEDKIREDCCP HIEVKFASEAEDKIREDCCPGKPLNVFRIE K F A I R E 2 1 0 1 0 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 10 1 1164.5775 Q9P2J5 Q9P2J5 1040 1049 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.00047661 169.65 By MS/MS 3 0 1 1 395020 395020 0 4219 2738 4381 10170 7282 7282 1 10312 0 FASEIAGVDDLGTTGR KTIMTRCIQCTRCIRFASEIAGVDDLGTTG ASEIAGVDDLGTTGRGNDMQVGTYIEKMFM R F A G R G 2 1 0 2 0 0 1 3 0 1 1 0 0 1 0 1 2 0 0 1 0 0 16 0 1607.7791 P28331 P28331 185 200 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 4.6217E-50 276.12 By MS/MS 5.5 0.5 1 1 2 6013200 6013200 0 4220 718 4382 10171;10172 7283 7283 1 219470 0 FASENDLPEWK EDEEELFKMRAKLFRFASENDLPEWKERGT KLFRFASENDLPEWKERGTGDVKLLKHKEK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 P43487 P43487 58 68 RANBP1 Ran-specific GTPase-activating protein yes yes 2 3.0715E-17 232.41 By MS/MS 8.5 0.5 1 1 2 8276700 8276700 0 4221 865 4383 10173;10174 7284;7285 7284 2 791430 0 FASENDLPEWKER EDEEELFKMRAKLFRFASENDLPEWKERGT FRFASENDLPEWKERGTGDVKLLKHKEKGA R F A E R G 1 1 1 1 0 0 3 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 13 1 1619.758 P43487 P43487 58 70 RANBP1 Ran-specific GTPase-activating protein yes yes 2;3 7.9078E-25 247.3 By MS/MS 8.5 0.5 2 2 4 20810000 20810000 0 4222 865 4384 10175;10176;10177;10178 7286;7287;7288 7287 3 1825600 0 FASFIDK VKAQEREQIKTLNNKFASFIDKVRFLEQQN QIKTLNNKFASFIDKVRFLEQQNQVLQTKW K F A D K V 1 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 7 0 826.4225 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__P19013;P19013;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P05787;CON__P07744;P05787;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__Q9NSB2;CON__Q6ISB0;P08729;Q9NSB2;CON__Q9H552;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647;CON__Q7Z794;Q7Z794;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q14CN4-1;CON__Q6IME9;CON__Q3SY84;Q14CN4;Q3SY84 CON__P35908v2 189 195 KRT2;KRT4;KRT6A;KRT75;KRT8;KRT7;KRT84;KRT6C;KRT6B;KRT5;KRT77;KRT74;KRT73;KRT72;KRT71 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71 no no 2 0.012279 147.69 By MS/MS By matching 4.38 3.24 2 1 1 1 1 1 1 7 1 5508000 5228800 279250 + 4223 52;50;36;53;449;61;63;57 4385 10179;10180;10181;10182;10183;10184;10185;10186 7289;7290;7291 7289 3 661480 279250 FASFIDKVR VKAQEREQIKTLNNKFASFIDKVRFLEQQN KTLNNKFASFIDKVRFLEQQNQVLQTKWEL K F A V R F 1 1 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 1 0 0 9 1 1081.592 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P05787;CON__P07744;P05787;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__Q9NSB2;CON__Q6ISB0;P08729;Q9NSB2;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647;CON__Q7Z794;Q7Z794;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q14CN4-1;CON__Q6IME9;CON__Q3SY84;Q14CN4;Q3SY84 CON__P35908v2 189 197 KRT2;KRT6A;KRT75;KRT8;KRT7;KRT84;KRT6C;KRT6B;KRT5;KRT77;KRT74;KRT73;KRT72;KRT71 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71 no no 2;3 0.0044558 151.04 By MS/MS By MS/MS 4.59 2.79 3 2 2 2 2 1 2 1 1 1 6 11 4607800 3548000 1059800 + 4224 52;50;36;53;449;61;63;57 4386 10187;10188;10189;10190;10191;10192;10193;10194;10195;10196;10197;10198;10199;10200;10201;10202;10203 7292;7293;7294;7295 7292 4 557610 1901600 FASGGCDNLIK LIDHPSGQKPNYIKRFASGGCDNLIKLWKE YIKRFASGGCDNLIKLWKEEEDGQWKEEQK R F A I K L 1 0 1 1 1 0 0 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1180.5547 P55735 P55735 182 192 SEC13 Protein SEC13 homolog yes yes 2 7.0158E-05 166.34 By MS/MS 7.5 0.5 1 1 2 2044300 2044300 0 4225 1033 4387 10204;10205 7296 7296 1 118420 0 FASNVVEK VAEIRGNVLVLSQHKFASNVVEKCVTHASR LVLSQHKFASNVVEKCVTHASRTERAVLID K F A E K C 1 0 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 8 0 892.46543 Q14671;Q8TB72 Q14671 1077 1084 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 yes no 2 0.0038356 143.73 By MS/MS 3.5 0.5 1 1 2 2033300 2033300 0 4226 1438 4388 10206;10207 7297 7297 1 53709 0 FASYLTFSPSEVK DMLRVEQVKIHAGPKFASYLTFSPSEVKSL PKFASYLTFSPSEVKSLRTEYGDLELCIEV K F A V K S 1 0 0 0 0 0 1 0 0 0 1 1 0 2 1 3 1 0 1 1 0 0 13 0 1474.7344 P54886 P54886 650 662 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 2.8714E-26 250.76 By MS/MS 4.5 1.12 1 1 1 1 4 14846000 14846000 0 4227 1019 4389 10208;10209;10210;10211 7298;7299;7300 7299 3 404630 0 FATEAAITILR AGVFEPTIVKVKSLKFATEAAITILRIDDL KSLKFATEAAITILRIDDLIKLHPESKDDK K F A L R I 3 1 0 0 0 0 1 0 0 2 1 0 0 1 0 0 2 0 0 0 0 0 11 0 1204.6816 P17987 P17987 516 526 TCP1 T-complex protein 1 subunit alpha yes yes 2 3.7526E-08 194.94 By MS/MS 7.67 1.49 2 1 1 1 1 6 73439000 73439000 0 4228 619 4390 10212;10213;10214;10215;10216;10217 7301;7302 7301 1 703410 0 FATEYCNTIEGTAK PVDDKSATLLQLITKFATEYCNTIEGTAKY KFATEYCNTIEGTAKYIETSELCGGARICY K F A A K Y 2 0 1 0 1 0 2 1 0 1 0 1 0 1 0 0 3 0 1 0 0 0 14 0 1603.7188 O00429 O00429 340 353 DNM1L Dynamin-1-like protein yes yes 2 1.1415E-87 336.93 By MS/MS 5.5 0.5 1 1 2 1626900 1626900 0 4229 94 4391 10218;10219 7303 7303 1 51148 0 FATHAAALSVR ELDDTPMRGRQLRVRFATHAAALSVRNLSP LRVRFATHAAALSVRNLSPYVSNELLEEAF R F A V R N 4 1 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 0 1 0 0 11 0 1142.6196 P23246 P23246 366 376 SFPQ Splicing factor, proline- and glutamine-rich yes yes 3 0.0024946 117.14 By MS/MS 4 0 1 1 600770 600770 0 4230 665 4392 10220 7304 7304 1 16400 0 FAVFGLGNK YDWLQETDVDLSGVKFAVFGLGNKTYEHFN DLSGVKFAVFGLGNKTYEHFNAMGKYVDKR K F A N K T 1 0 1 0 0 0 0 2 0 0 1 1 0 2 0 0 0 0 0 1 0 0 9 0 951.5178 P16435 P16435 168 176 POR NADPH--cytochrome P450 reductase yes yes 2 0.0012056 138.37 By MS/MS 5.5 0.5 1 1 2 1051100 1051100 0 4231 607 4393 10221;10222 7305 7305 1 35131 0 FAVGTAGLGAEER TWLARRGAPGDVWARFAVGTAGLGAEERRA ARFAVGTAGLGAEERRALEREQARHGDLLL R F A E R R 3 1 0 0 0 0 2 3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 13 0 1276.6412 Q96L58 Q96L58 94 106 B3GALT6 Beta-1,3-galactosyltransferase 6 yes yes 2 0.00054271 137.01 By MS/MS 8 0 1 1 1141300 1141300 0 4232 2223 4394 10223 7306 7306 1 75288 0 FAVLHGEAPR KETIIAFAWEPNGSKFAVLHGEAPRISVSF PNGSKFAVLHGEAPRISVSFYHVKNNGKIE K F A P R I 2 1 0 0 0 0 1 1 1 0 1 0 0 1 1 0 0 0 0 1 0 0 10 0 1095.5825 P55884 P55884 577 586 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.00077638 117.81 By MS/MS By matching 4.5 1.63 1 1 3 2 2 1 9 1 17478000 17414000 63531 4233 1040 4395 10224;10225;10226;10227;10228;10229;10230;10231;10232;10233 7307;7308;7309;7310 7309 4 421490 132750 FAYVPFGAGR NPDRYLQDNPASGEKFAYVPFGAGRHRCIG ASGEKFAYVPFGAGRHRCIGENFAYVQIKT K F A G R H 2 1 0 0 0 0 0 2 0 0 0 0 0 2 1 0 0 0 1 1 0 0 10 0 1083.5502 Q16850 Q16850 437 446 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 0.0049568 107.59 By MS/MS 6 0 1 1 2370800 2370800 0 4234 1551 4396 10234 7311 7311 1 18488 0 FCAFTLSK ILDEMSHKLRLGAIRFCAFTLSKVFKQIFS LRLGAIRFCAFTLSKVFKQIFSKVCVNEEG R F C S K V 1 0 0 0 1 0 0 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 8 0 972.47389 O15228 O15228 121 128 GNPAT Dihydroxyacetone phosphate acyltransferase yes yes 2 0.042463 94.302 By MS/MS 5 0 1 1 710060 710060 0 4235 160 4397 10235 7312 7312 1 29187 0 FCAGILSTAR IVLLEQGRLAAGSTRFCAGILSTARHLTIE AGSTRFCAGILSTARHLTIEQKMADYSNKL R F C A R H 2 1 0 0 1 0 0 1 0 1 1 0 0 1 0 1 1 0 0 0 0 0 10 0 1094.5543 Q8NCN5 Q8NCN5 84 93 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 0.0040959 110.41 By MS/MS 4 0 1 1 972420 972420 0 4236 1955 4398 10236 7313 7313 1 26546 0 FCDNSSAIQGK IMSTQESSNPNNVLKFCDNSSAIQGKEVRF NVLKFCDNSSAIQGKEVRFLRPEDPTRPSR K F C G K E 1 0 1 1 1 1 0 1 0 1 0 1 0 1 0 2 0 0 0 0 0 0 11 0 1225.5397 O15067 O15067 269 279 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 0.00024037 160.53 By MS/MS 3 0 1 1 0 0 0 4237 145 4399 10237 7314 7314 1 0 0 FCEDLFSQVAR YTMMGFSEEPGIIPRFCEDLFSQVARKQTQ IIPRFCEDLFSQVARKQTQEVSYHIEMSFF R F C A R K 1 1 0 1 1 1 1 0 0 0 1 0 0 2 0 1 0 0 0 1 0 0 11 0 1370.6289 Q15058 Q15058 470 480 KIF14 Kinesin-like protein KIF14 yes yes 2 6.7373E-07 183.72 By MS/MS 4 0.816 1 1 1 3 3866600 3866600 0 4238 1475 4400 10238;10239;10240 7315 7315 1 145780 0 FCEEFKEK MDPNSTQRYRLEALKFCEEFKEKCPICVPC YRLEALKFCEEFKEKCPICVPCGLRLAEKT K F C E K C 0 0 0 0 1 0 3 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 8 1 1115.4957 Q9HAV4 Q9HAV4 36 43 XPO5 Exportin-5 yes yes 3 0.0021419 148.04 By MS/MS 3.5 0.5 1 1 2 576470 576470 0 4239 2546 4401 10241;10242 7316 7316 1 15222 0 FCENTQAGEGR LDRHLYFACRDDRERFCENTQAGEGRVYKC DRERFCENTQAGEGRVYKCLFNHKFEESMS R F C G R V 1 1 1 0 1 1 2 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 11 0 1267.5251 Q92896 Q92896 323 333 GLG1 Golgi apparatus protein 1 yes yes 2 1.2864E-16 229.82 By MS/MS 3.5 0.5 1 1 2 258580 258580 0 4240 2087 4402 10243;10244 7317 7317 1 6798 0 FCFTPHTEEGCLSER APRRQQEQQVPILEKFCFTPHTEEGCLSER FCFTPHTEEGCLSERAALQEELQLCKGLVQ K F C E R A 0 1 0 0 2 0 3 1 1 0 1 0 0 2 1 1 2 0 0 0 0 0 15 0 1868.7822 P49327 P49327 1117 1131 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 5.4789E-07 178.95 By MS/MS 2.62 1.32 2 2 2 1 1 8 16132000 16132000 0 4241 915 4403 10245;10246;10247;10248;10249;10250;10251;10252 7318;7319;7320;7321 7321 4 492140 0 FCLQYTR RVERLYHDIAQQAFKFCLQYTRKAEFRKLC DIAQQAFKFCLQYTRKAEFRKLCDNLRMHL K F C T R K 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 7 0 986.46439 Q14152 Q14152 184 190 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0094613 155.51 By MS/MS 3.5 1.12 1 1 1 1 4 7925700 7925700 0 4242 1409 4404 10253;10254;10255;10256 7322 7322 1 216790 0 FCLSAAHTK VVGFPATPIIESRARFCLSAAHTKEILDTA IESRARFCLSAAHTKEILDTALKEIDEVGD R F C T K E 2 0 0 0 1 0 0 0 1 0 1 1 0 1 0 1 1 0 0 0 0 0 9 0 1033.5015 O15270 O15270 510 518 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.0091407 106.68 By MS/MS 6 0 1 1 1207600 1207600 0 4243 166 4405 10257 7323 7323 1 9416.5 0 FCNVDDDELR RIGEYLEKIIPLVVKFCNVDDDELREYCIQ PLVVKFCNVDDDELREYCIQAFESFVRRCP K F C L R E 0 1 1 3 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1281.5296 Q86VP6 Q86VP6 263 272 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.032212 83.862 By MS/MS 3.5 0.5 1 1 2 1156100 1156100 0 4244 1829 4406 10258;10259 7324 7324 1 31095 0 FCQLLWR WTFQGRLLQKNNKDRFCQLLWRPRPPTLLS LQKNNKDRFCQLLWRPRPPTLLSQEQIKQI R F C W R P 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 0 7 0 1021.5168 P55884 P55884 699 705 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.019138 128.75 By MS/MS 5 0.816 1 1 1 3 716010 716010 0 4245 1040 4407 10260;10261;10262 7325 7325 1 14640 0 FDAGELITQR LPSITTEILKSVVARFDAGELITQRELVSR SVVARFDAGELITQRELVSRQVSDDLTERA R F D Q R E 1 1 0 1 0 1 1 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1148.5826 P35232 P35232 134 143 PHB Prohibitin yes yes 2 4.5888E-12 214.05 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 114350000 113280000 1066000 4246 782 4408 10263;10264;10265;10266 7326;7327;7328;7329 7327 4 9841000 9094300 FDAMPFTLR KMKTSRAFFSEVERRFDAMPFTLRAFEDEK SEVERRFDAMPFTLRAFEDEKKARMGVVEC R F D L R A 1 1 0 1 0 0 0 0 0 0 1 0 1 2 1 0 1 0 0 0 0 0 9 0 1096.5376 Q9UQ80 Q9UQ80 273 281 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.0027409 117.89 By MS/MS 7 0 1 1 1174700 1174700 0 4247 2859 4409 10267 7330 7330 1643 1 20992 0 FDAQTGADREVQR AIIFIDEIDAIATKRFDAQTGADREVQRIL KRFDAQTGADREVQRILLELLNQMDGFDQN R F D Q R I 2 2 0 2 0 2 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 13 1 1491.7066 P43686 P43686 275 287 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.010589 126.03 By MS/MS 7 0.816 1 1 1 3 6749100 6749100 0 4248 867 4410 10268;10269;10270 7331 7331 1 71908 0 FDASFFGVHPK YGLPRRSGKLKDLSRFDASFFGVHPKQAHT DLSRFDASFFGVHPKQAHTMDPQLRLLLEV R F D P K Q 1 0 0 1 0 0 0 1 1 0 0 1 0 3 1 1 0 0 0 1 0 0 11 0 1250.6084 P49327 P49327 60 70 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00011812 175.91 By MS/MS 5.06 2.84 2 2 2 2 2 1 2 2 2 17 9224400 9224400 0 4249 915 4411 10271;10272;10273;10274;10275;10276;10277;10278;10279;10280;10281;10282;10283;10284;10285;10286;10287 7332;7333;7334;7335;7336;7337;7338;7339;7340;7341 7335 10 648080 0 FDAVIGYK PERFLAVLKQKISVKFDAVIGYKMKAQ___ KQKISVKFDAVIGYKMKAQ___________ K F D Y K M 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 911.47527 Q8NBQ5 Q8NBQ5 289 296 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 0.01609 111.82 By MS/MS 8 0 1 1 534130 534130 0 4250 1944 4412 10288 7342 7342 1 35237 0 FDAVQSAHR QQYIEQSQAEIYHNRFDAVQSAHRAATRGF EIYHNRFDAVQSAHRAATRGFIRYGWRWGW R F D H R A 2 1 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1029.4992 Q9NPL8 Q9NPL8 117 125 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 3 0.032782 103.55 By MS/MS 8 0 1 1 1747500 1747500 0 4251 2583 4413 10289 7343 7343 1 115280 0 FDDAVVQSDMK PTNTVFDAKRLIGRRFDDAVVQSDMKHWPF IGRRFDDAVVQSDMKHWPFMVVNDAGRPKV R F D M K H 1 0 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 11 0 1253.5598 P11142 P11142 78 88 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 9.7218E-07 178.46 By MS/MS 5 0 1 1 3334100 3334100 0 4252 546 4414 10290 7344 7344 1 137040 0 FDDGAGGDNEVQR CLIFFDEIDAIGGARFDDGAGGDNEVQRTM ARFDDGAGGDNEVQRTMLELINQLDGFDPR R F D Q R T 1 1 1 3 0 1 1 3 0 0 0 0 0 1 0 0 0 0 0 1 0 0 13 0 1378.5749 P35998 P35998 285 297 PSMC2 26S protease regulatory subunit 7 yes yes 2 7.0786E-18 226.33 By MS/MS 6.5 0.5 1 1 2 7406000 7406000 0 4253 801 4415 10291;10292 7345;7346 7345 2 77568 0 FDDGDVTECK IQRNGGDGERNRWYKFDDGDVTECKMDDDE NRWYKFDDGDVTECKMDDDEEMKNQCFGGE K F D C K M 0 0 0 3 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 10 0 1184.4656 Q93008;O00507 Q93008 1900 1909 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.00093849 125.71 By MS/MS 2 0.816 1 1 1 3 1343100 1343100 0 4254 2096 4416 10293;10294;10295 7347 7347 1 65015 0 FDDKPDYSYLR PSEFSTYLNFCRSLRFDDKPDYSYLRQLFR RSLRFDDKPDYSYLRQLFRNLFHRQGFSYD R F D L R Q 0 1 0 3 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 0 0 0 11 1 1417.6514 P49674;P48730 P49674 260 270 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta yes no 3 0.017212 98.898 By MS/MS 7 0 1 1 1468600 1468600 0 4255 925 4417 10296 7348 7348 1 26244 0 FDDKYTLK MDPDDIWQLSSSLKRFDDKYTLKLTFISGR LSSSLKRFDDKYTLKLTFISGRTKQQREAE R F D L K L 0 0 0 2 0 0 0 0 0 0 1 2 0 1 0 0 1 0 1 0 0 0 8 1 1028.5179 Q15005 Q15005 166 173 SPCS2 Signal peptidase complex subunit 2 yes yes 3 0.031589 87.258 By MS/MS 9 0 1 1 576320 576320 0 4256 1458 4418 10297 7349 7349 1 330750 0 FDDPLLGPR MNRGIKDLSKVKLMRFDDPLLGPRRVPVLG KVKLMRFDDPLLGPRRVPVLGKEYTEKTPI R F D P R R 0 1 0 2 0 0 0 1 0 0 2 0 0 1 2 0 0 0 0 0 0 0 9 0 1028.5291 Q9P2J5 Q9P2J5 1118 1126 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.010344 104.06 By MS/MS 4.67 3.86 1 1 1 3 4437700 4437700 0 4257 2738 4419 10298;10299;10300 7350;7351;7352 7352 3 253090 0 FDDTNPEKEKEDFEK NQHYQVNFKGKLIMRFDDTNPEKEKEDFEK FDDTNPEKEKEDFEKVILEDVAMLHIKPDQ R F D E K V 0 0 1 3 0 0 4 0 0 0 0 3 0 2 1 0 1 0 0 0 0 0 15 2 1869.8269 P07814 P07814 236 250 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3;4 0.00017903 131.35 By MS/MS 4.17 1.07 2 2 1 1 6 9484200 9484200 0 4258 493 4420 10301;10302;10303;10304;10305;10306 7353;7354 7353 2 239440 0 FDECVLDK TGQQLFRHCRKQQAKFDECVLDKLGWVRPD CRKQQAKFDECVLDKLGWVRPDLGELSKVT K F D D K L 0 0 0 2 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 1024.4535 P51970 P51970 107 114 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2 0.0033587 147.29 By MS/MS 9.5 0.5 1 1 2 883080 883080 0 4259 980 4421 10307;10308 7355;7356 7356 2 592960 0 FDEISFVNFAR ERGFIYVHKPPVHIRFDEISFVNFARGTTT VHIRFDEISFVNFARGTTTTRSFDFEIETK R F D A R G 1 1 1 1 0 0 1 0 0 1 0 0 0 3 0 1 0 0 0 1 0 0 11 0 1343.651 Q08945 Q08945 371 381 SSRP1 FACT complex subunit SSRP1 yes yes 2 4.3626E-16 221.68 By MS/MS 5.5 0.5 1 1 2 3164900 3164900 0 4260 1291 4422 10309;10310 7357;7358 7357 2 51014 0 FDEVLIR YVRCIKPNDAKQPGRFDEVLIRHQVKYLGL NDAKQPGRFDEVLIRHQVKYLGLLENLRVR R F D I R H 0 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 890.48617 O00159 O00159 637 643 MYO1C Unconventional myosin-Ic yes yes 2 0.015644 138.37 By MS/MS 4 0 1 1 716200 716200 0 4261 72 4423 10311 7359 7359 1 19552 0 FDGALNVDLTEFQTNLVPYPR RLISQIVSSITASLRFDGALNVDLTEFQTN VDLTEFQTNLVPYPRIHFPLATYAPVISAE R F D P R I 1 1 2 2 0 1 1 1 0 0 3 0 0 2 2 0 2 0 1 2 0 0 21 0 2408.2012 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 244 264 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2 1.2964E-12 163.9 By MS/MS 6 0 1 1 1575700 1575700 0 4262 1185;1754;2314;1186 4424 10312 7360 7360 1 12288 0 FDGAVEAVAVR SYDRTALKLGPESFKFDGAVEAVAVRQAEK ESFKFDGAVEAVAVRQAEKYYILRPEVIET K F D V R Q 3 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 3 0 0 11 0 1132.5877 O60476 O60476 512 522 MAN1A2 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB yes yes 2 0.0011594 131.52 By MS/MS 5 0 1 1 435610 435610 0 4263 247 4425 10313 7361 7361 1 17905 0 FDGGVEAIATR SYNRTFMKLGPEAFRFDGGVEAIATRQNEK EAFRFDGGVEAIATRQNEKYYILRPEVMET R F D T R Q 2 1 0 1 0 0 1 2 0 1 0 0 0 1 0 0 1 0 0 1 0 0 11 0 1134.5669 P33908 P33908 526 536 MAN1A1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA yes yes 2 0.0025647 112.83 By MS/MS 5 0 1 1 0 0 0 4264 771 4426 10314 7362 7362 1 0 0 FDILCVVR TFSENVDLTEPIISRFDILCVVRDTVDPVQ TEPIISRFDILCVVRDTVDPVQDEMLARFV R F D V R D 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 1020.5426 P49736 P49736 657 664 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.0043405 138.9 By MS/MS 4 0 1 1 1082700 1082700 0 4265 928 4427 10315 7363 7363 1 29555 0 FDITIGPK VKHSISFKENSSCGRFDITIGPKQNMGKTI ENSSCGRFDITIGPKQNMGKTIEGITVTVH R F D P K Q 0 0 0 1 0 0 0 1 0 2 0 1 0 1 1 0 1 0 0 0 0 0 8 0 889.49092 Q9Y2T2 Q9Y2T2 291 298 AP3M1 AP-3 complex subunit mu-1 yes yes 2 0.054049 89.752 By MS/MS 7 0 1 1 508510 508510 0 4266 2901 4428 10316 7364 7364 1 9087.2 0 FDKEEEIRK EKNGLNLLRRLWVVKFDKEEEIRKLAERLW RLWVVKFDKEEEIRKLAERLWSMMGLDLQP K F D R K L 0 1 0 1 0 0 3 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 9 2 1192.6088 Q92616 Q92616 1135 1143 GCN1L1 Translational activator GCN1 yes yes 3 0.0016383 125.57 By MS/MS 2.5 0.5 1 1 2 392960 392960 0 4267 2068 4429 10317;10318 7365 7365 1 15941 0 FDKKDEESGGGSNPFQHLEK ______________________________ EESGGGSNPFQHLEKSAVLQEARVFNETPI K F D E K S 0 0 1 2 0 1 3 3 1 0 1 3 0 2 1 2 0 0 0 0 0 0 20 2 2248.0396 Q9Y678 Q9Y678 5 24 COPG1 Coatomer subunit gamma-1 yes yes 4 0.053841 44.641 By MS/MS 4.5 0.5 1 1 2 1519700 1519700 0 4268 2996 4430 10319;10320 7366 7366 1 45763 0 FDLGIICVDNK RSKIEIVRRILGVQKFDLGIICVDNKNIQH GVQKFDLGIICVDNKNIQHINRIYRDRNVP K F D N K N 0 0 1 2 1 0 0 1 0 2 1 1 0 1 0 0 0 0 0 1 0 0 11 0 1292.6435 P58557 P58557 35 45 YBEY Putative ribonuclease yes yes 2 0.00052133 141.88 By MS/MS 10 0 1 1 143320 143320 0 4269 1061 4431 10321 7367 7367 1 152330 0 FDLLEELVAK KQAFAHVSKLLSQCKFDLLEELVAKEVLHA LSQCKFDLLEELVAKEVLHALKEKVTSLPD K F D A K E 1 0 0 1 0 0 2 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 10 0 1175.6438 Q8WWC4 Q8WWC4 164 173 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.00028855 153.24 By MS/MS 9 0 1 1 532480 532480 0 4270 2037 4432 10322 7368 7368 1 305600 0 FDLLGDFGR SSALPVFSRTLGLTRFDLLGDFGRFNWLGN TLGLTRFDLLGDFGRFNWLGNFYIVFLYNA R F D G R F 0 1 0 2 0 0 0 2 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1038.5134 Q6UX01;Q8WVP7 Q6UX01 418 426 LMBR1L;LMBR1 Protein LMBR1L;Limb region 1 protein homolog yes no 2 0.0024319 125.16 By MS/MS 7.5 0.5 1 1 2 391350 391350 0 4271 1730 4433 10323;10324 7369 7369 1 11811 0 FDLMYAK NTTAIAEAWARLDHKFDLMYAKRAFVHWYV AWARLDHKFDLMYAKRAFVHWYVGEGMEEG K F D A K R 1 0 0 1 0 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 0 0 7 0 886.42588 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;A6NHL2;P68366 P68363 395 401 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBAL3;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 2 0.019236 128.48 By MS/MS 6 0 2 2 13798000 13798000 0 4272 1185;1754;2314;1186;22 4434;4435 10325;10326 7370;7371 7371 6 2 107600 0 FDMIVPILEK LMKICMNEDPAKRPKFDMIVPILEKMQDK_ AKRPKFDMIVPILEKMQDK___________ K F D E K M 0 0 0 1 0 0 1 0 0 2 1 1 1 1 1 0 0 0 0 1 0 0 10 0 1203.6573 Q13418 Q13418 439 448 ILK Integrin-linked protein kinase yes yes 2 0.0066998 101.9 By MS/MS 6.67 0.471 1 2 3 1054400 1054400 0 4273 1366 4436;4437 10327;10328;10329 7372;7373 7372 1064 2 12452 0 FDNLYGCR KVPAINVNDSVTKSKFDNLYGCRESLIDGI DSVTKSKFDNLYGCRESLIDGIKRATDVMI K F D C R E 0 1 1 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1043.4495 P23526 P23526 189 196 AHCY Adenosylhomocysteinase yes yes 2 0.044828 93.374 By MS/MS 7 0 1 1 488680 488680 0 4274 670 4438 10330 7374 7374 1 8732.8 0 FDNPAAVSPTPTR IRVQVIQSQLPVFTRFDNPAAVSPTPTRQL TRFDNPAAVSPTPTRQLTFNYLLPVNAWLL R F D T R Q 2 1 1 1 0 0 0 0 0 0 0 0 0 1 3 1 2 0 0 1 0 0 13 0 1371.6783 Q6ZXV5 Q6ZXV5 267 279 TMTC3 Transmembrane and TPR repeat-containing protein 3 yes yes 2 0.0080996 97.86 By MS/MS 1.5 0.5 1 1 2 451400 451400 0 4275 1748 4439 10331;10332 7375;7376 7375 2 22202 0 FDNSYSLWR AGSHQYPGRGVYLLKFDNSYSLWRSKSVYY GVYLLKFDNSYSLWRSKSVYYRVYYTR___ K F D W R S 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 2 0 1 1 0 0 0 9 0 1186.5407 Q9H3P7 Q9H3P7 508 516 ACBD3 Golgi resident protein GCP60 yes yes 2 0.017821 97.965 By MS/MS 5 0 1 1 565620 565620 0 4276 2491 4440 10333 7377 7377 1 23249 0 FDPFIVEEIQR IYKTYCLDESIDKIRFDPFIVEEIQRIAEG DKIRFDPFIVEEIQRIAEGPYIDVVKLQTM R F D Q R I 0 1 0 1 0 1 2 0 0 2 0 0 0 2 1 0 0 0 0 1 0 0 11 0 1391.7085 Q9Y5W7 Q9Y5W7 411 421 SNX14 Sorting nexin-14 yes yes 2 0.00077222 143.96 By MS/MS 4 0 1 1 547950 547950 0 4277 2983 4441 10334 7378 7378 1 14958 0 FDPTWESLDAR LLLPPPPCPAHSATRFDPTWESLDARQLPA SATRFDPTWESLDARQLPAWFDQAKFGIFI R F D A R Q 1 1 0 2 0 0 1 0 0 0 1 0 0 1 1 1 1 1 0 0 0 0 11 0 1335.6095 Q9BTY2 Q9BTY2 34 44 FUCA2 Plasma alpha-L-fucosidase yes yes 2 5.9608E-05 167.93 By MS/MS 6 0 1 1 2905600 2905600 0 4278 2356 4442 10335 7379 7379 1 22658 0 FDPVGPLPGPNPILPGR GPGETPSQFPPLRPRFDPVGPLPGPNPILP PVGPLPGPNPILPGRGGPNDRFPFRPSRGR R F D G R G 0 1 1 1 0 0 0 3 0 1 2 0 0 1 6 0 0 0 0 1 0 0 17 0 1741.9515 Q9Y3I1 Q9Y3I1 482 498 FBXO7 F-box only protein 7 yes yes 2 0.013324 83.617 By MS/MS 5 0 1 1 261920 261920 0 4279 2939 4443 10336 7380 7380 1 10766 0 FDQLFDDESDPFEVLK PGHLQEGFGCVVTNRFDQLFDDESDPFEVL DQLFDDESDPFEVLKAAENKKKEAGGGGVG R F D L K A 0 0 0 4 0 1 2 0 0 0 2 1 0 3 1 1 0 0 0 1 0 0 16 0 1942.8836 Q8NC51 Q8NC51 17 32 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 2.4523E-77 314.29 By MS/MS 6 0 1 1 14743000 14743000 0 4280 1949 4444 10337 7381 7381 1 114970 0 FDQLLAEEK HQRQSACNLEKKQKKFDQLLAEEKTISAKY EKKQKKFDQLLAEEKTISAKYAEERDRAEA K F D E K T 1 0 0 1 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1091.5499 Q7Z406;P35580;P35579 P35579 1446 1454 MYH14;MYH10;MYH9 Myosin-14;Myosin-10;Myosin-9 no no 2 5.5529E-08 200.56 By MS/MS By matching 2.33 0.471 2 1 2 1 359790 345370 14423 4281 793;794;1788 4445 10338;10339;10340 7382 7382 1 15852 12143 FDQPLEASTWLK KNCRDLLQSSYNKQRFDQPLEASTWLKNFK KQRFDQPLEASTWLKNFKTTNERFLNQIKV R F D L K N 1 0 0 1 0 1 1 0 0 0 2 1 0 1 1 1 1 1 0 0 0 0 12 0 1433.7191 P51398 P51398 178 189 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 2.4695E-07 188.27 By MS/MS 7 0 1 1 10808000 10808000 0 4282 963 4446 10341 7383 7383 1 193140 0 FDRGYISPYFINTSK GKTLNDELEIIEGMKFDRGYISPYFINTSK FDRGYISPYFINTSKGQKCEFQDAYVLLSE K F D S K G 0 1 1 1 0 0 0 1 0 2 0 1 0 2 1 2 1 0 2 0 0 0 15 1 1806.8941 P10809 P10809 219 233 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.0013512 111.81 By MS/MS 6 0 1 1 3458000 3458000 0 4283 544 4447 10342 7384 7384 1 26966 0 FDSDAASPR RFISVGYVDDTQFVRFDSDAASPRGEPRAP DTQFVRFDSDAASPRGEPRAPWVEQEGPEY R F D P R G 2 1 0 2 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 9 0 964.42502 P01889;P10321 P10321 60 68 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain no no 2 5.8969E-08 199.7 By MS/MS 7.5 0.5 1 1 2 3471100 3471100 0 4284 536;436 4448 10343;10344 7385 7385 1 67099 0 FDSDAASQR RFIAVGYVDDTQFVRFDSDAASQRMEPRAP DTQFVRFDSDAASQRMEPRAPWIEQEGPEY R F D Q R M 2 1 0 2 0 1 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 9 0 995.43084 P04439 P04439 60 68 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain yes yes 2 0.00011812 169.44 By MS/MS 8 0.816 1 1 1 3 5087400 5087400 0 4285 453 4449 10345;10346;10347 7386 7386 1 122000 0 FDSKDEILLTLEK IAHFLEKLAFSSTARFDSKDEILLTLEKHG ARFDSKDEILLTLEKHGGICDCQTSRDTTM R F D E K H 0 0 0 2 0 0 2 0 0 1 3 2 0 1 0 1 1 0 0 0 0 0 13 1 1549.8239 Q10713 Q10713 123 135 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 3 0.00083216 121.21 By MS/MS 6 0 1 1 2335200 2335200 0 4286 1301 4450 10348 7387 7387 1 18210 0 FDSNNVVLIEDNGNPVGTR LIVGHCMPGPRMTPRFDSNNVVLIEDNGNP NVVLIEDNGNPVGTRIKTPIPTSLRKREGE R F D T R I 0 1 4 2 0 0 1 2 0 1 1 0 0 1 1 1 1 0 0 3 0 0 19 0 2058.997 Q6P1L8 Q6P1L8 100 118 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2;3 6.3382E-26 223.14 By MS/MS 10 0 2 2 2351600 2351600 0 4287 1700 4451 10349;10350 7388;7389 7388 2 2499500 0 FDTGNLCMVTGGANLGR IQIDLETGKITDFIKFDTGNLCMVTGGANL TGNLCMVTGGANLGRIGVITNRERHPGSFD K F D G R I 1 1 2 1 1 0 0 4 0 0 2 0 1 1 0 0 2 0 0 1 0 0 17 0 1781.8189 P62701 P62701 175 191 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 6.1669E-69 300.07 By MS/MS 8 0 1 1 1813100 1813100 0 4288 1140 4452 10351 7390 7390 890 1 119610 0 FDVINLAAEK PVVDEKGRVVDIYSKFDVINLAAEKTYNNL DIYSKFDVINLAAEKTYNNLDVSVTKALQH K F D E K T 2 0 1 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1118.5972 P54619;Q9UGJ0 P54619 244 253 PRKAG1;PRKAG2 5-AMP-activated protein kinase subunit gamma-1;5-AMP-activated protein kinase subunit gamma-2 yes no 2 0.00064854 139.15 By MS/MS 7 0 1 1 2185700 2185700 0 4289 1015 4453 10352 7391 7391 1 39059 0 FDVQLKDLEK NLTGRLNKCGVISPRFDVQLKDLEKWQNNL VISPRFDVQLKDLEKWQNNLLPSRQFGFIV R F D E K W 0 0 0 2 0 1 1 0 0 0 2 2 0 1 0 0 0 0 0 1 0 0 10 1 1233.6605 P62244 P62244 79 88 RPS15A 40S ribosomal protein S15a yes yes 2;3 0.00066543 149.33 By MS/MS 9.67 0.471 1 2 3 3707500 3707500 0 4290 1119 4454 10353;10354;10355 7392;7393 7392 2 3904400 0 FEAPLFNAR VEEADVVLLVGTNPRFEAPLFNARIRKSWL VGTNPRFEAPLFNARIRKSWLHNDLKVALI R F E A R I 2 1 1 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 9 0 1063.5451 P28331 P28331 409 417 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.010344 104.06 By MS/MS 5.5 0.5 1 1 2 2873000 2873000 0 4291 718 4455 10356;10357 7394 7394 1 103830 0 FEDENFILK TRHNGTGGKSIYGEKFEDENFILKHTGPGI SIYGEKFEDENFILKHTGPGILSMANAGPN K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 3.9775E-12 231.2 By MS/MS By matching 10 0 2 1 1 9356600 9318500 38086 4292 1163 4456 10358;10359 7395 7395 1 9904600 976890 FEDPKFEVIEKPQA QMFGNADMNTFPTFKFEDPKFEVIEKPQA_ KFEDPKFEVIEKPQA_______________ K F E Q A - 1 0 0 1 0 1 3 0 0 1 0 2 0 2 2 0 0 0 0 1 0 0 14 2 1675.8457 P18859 P18859 95 108 ATP5J ATP synthase-coupling factor 6, mitochondrial yes yes 2;3 0.0010771 144.28 By MS/MS 10 0 2 2 1792700 1792700 0 4293 627 4457 10360;10361 7396;7397 7397 2 1905500 0 FEDTLEFVGFDAK SVAASSHVPIQKKLRFEDTLEFVGFDAKMA LRFEDTLEFVGFDAKMAEESSSSSSSSSPT R F E A K M 1 0 0 2 0 0 2 1 0 0 1 1 0 3 0 0 1 0 0 1 0 0 13 0 1516.7086 Q13620 Q13620 121 133 CUL4B Cullin-4B yes yes 2 7.6949E-35 261.52 By MS/MS 4 0 1 1 292230 292230 0 4294 1390 4458 10362 7398 7398 1 7977.5 0 FEDVVNQSSPK PAPKSTQENNTKQLRFEDVVNQSSPKNCTV KQLRFEDVVNQSSPKNCTVYCGGIASGLTD R F E P K N 0 0 1 1 0 1 1 0 0 0 0 1 0 1 1 2 0 0 0 2 0 0 11 0 1248.5986 Q01085 Q01085 193 203 TIAL1 Nucleolysin TIAR yes yes 2 4.6422E-07 187.42 By MS/MS 7.5 0.5 1 1 2 4292600 4292600 0 4295 1239 4459 10363;10364 7399 7399 1 91090 0 FEEAAGAAPCR EYKKKQDPYLLKTGRFEEAAGAAPCRLALS KTGRFEEAAGAAPCRLALSPNAQVLALASG R F E C R L 4 1 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 11 0 1177.5186 Q9Y4P3 Q9Y4P3 326 336 TBL2 Transducin beta-like protein 2 yes yes 2 0.0013771 128.6 By MS/MS 7 0 1 1 1993400 1993400 0 4296 2957 4460 10365 7400 7400 1 35622 0 FEEAVEK IQRLQLCYQLTTVGKFEEAVEKFRSILLSV YQLTTVGKFEEAVEKFRSILLSVPLLVVDN K F E E K F 1 0 0 0 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 7 0 850.40725 P53621 P53621 1022 1028 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.021598 121.99 By MS/MS 2 0.816 1 1 1 3 947240 947240 0 4297 1005 4461 10366;10367;10368 7401 7401 1 40106 0 FEECRKEIEER IRFLNAENAQKFKTKFEECRKEIEEREKKA FKTKFEECRKEIEEREKKAGSGKNDHAEKV K F E E R E 0 2 0 0 1 0 5 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 11 2 1523.7038 P43487 P43487 155 165 RANBP1 Ran-specific GTPase-activating protein yes yes 3 0.0025731 112.94 By MS/MS 8 0 1 1 1065400 1065400 0 4298 865 4462 10369 7402 7402 1 70284 0 FEELCSDLFR LFEGIDFYTSITRARFEELCSDLFRSTLEP ITRARFEELCSDLFRSTLEPVEKALRDAKL R F E F R S 0 1 0 1 1 0 2 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 10 0 1314.5914 P0DMV9;P0DMV8;P17066;P48741 P0DMV9 302 311 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 4.9015E-07 189.38 By MS/MS 5.5 0.5 1 1 2 12785000 12785000 0 4299 528;611 4463 10370;10371 7403 7403 1 458280 0 FEELLLQASK MGLSEAEAIGADSARFEELLLQASKELQQA ADSARFEELLLQASKELQQAQTTRPESTQI R F E S K E 1 0 0 0 0 1 2 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 10 0 1176.639 Q9NWS0 Q9NWS0 24 33 PIH1D1 PIH1 domain-containing protein 1 yes yes 2 0.0004709 146.11 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 71796000 71796000 0 4300 2667 4464 10372;10373;10374;10375;10376;10377 7404 7404 1 649860 0 FEELNADLFR LYEGIDFYTSITRARFEELNADLFRGTLDP ITRARFEELNADLFRGTLDPVEKALRDAKL R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 P11142;P54652 P11142 302 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 2.6298E-07 192.26 By MS/MS 6 2.58 1 1 1 1 1 1 1 1 1 9 22948000 22948000 0 4301 546 4465 10378;10379;10380;10381;10382;10383;10384;10385;10386 7405;7406;7407;7408 7406 4 881310 0 FEELNMDLFR FYEGEDFSETLTRAKFEELNMDLFRSTMKP LTRAKFEELNMDLFRSTMKPVQKVLEDSDL K F E F R S 0 1 1 1 0 0 2 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 10 0 1312.6122 P11021 P11021 327 336 HSPA5 78 kDa glucose-regulated protein yes yes 2 1.3883E-10 198.72 By MS/MS 5 0 2 2 979180 979180 0 4302 545 4466;4467 10387;10388 7409;7410 7409 330 2 40248 0 FEELTNLIR EEDTKRVVRSAKDKRFEELTNLIRTIRNAM SAKDKRFEELTNLIRTIRNAMKIRDVTKCL R F E I R T 0 1 1 0 0 0 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1133.6081 Q99613;B5ME19 Q99613 57 65 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 5.5626E-08 200.54 By MS/MS By matching 4.75 1.2 1 3 2 1 1 7 1 18980000 18942000 37160 4303 2275 4468 10389;10390;10391;10392;10393;10394;10395;10396 7411;7412;7413;7414;7415 7414 5 518390 77648 FEEMIQQIK SVEDYKALQKYEKEKFEEMIQQIKETGANL KYEKEKFEEMIQQIKETGANLAICQWGFDD K F E I K E 0 0 0 0 0 2 2 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 9 0 1164.5849 P48643 P48643 285 293 CCT5 T-complex protein 1 subunit epsilon yes yes 2 2.9017E-06 180.45 By MS/MS 6 0 1 1 4572600 4572600 0 4304 909 4469 10397 7416 7416 645 1 35657 0 FEFQSLLSSR SPGSPAHGGGGGGSRFEFQSLLSSRATAVD GGGSRFEFQSLLSSRATAVDPTCARLRASE R F E S R A 0 1 0 0 0 1 1 0 0 0 2 0 0 2 0 3 0 0 0 0 0 0 10 0 1212.6139 Q8IY26 Q8IY26 38 47 PPAPDC2 Presqualene diphosphate phosphatase yes yes 2 0.00023008 155.53 By MS/MS 8 0 1 1 760660 760660 0 4305 1877 4470 10398 7417 7417 1 50181 0 FEGPQVQDGR RGVSVWPVGLVGGLRFEGPQVQDGRVVGFH VGGLRFEGPQVQDGRVVGFHTAWEPSRPFP R F E G R V 0 1 0 1 0 2 1 2 0 0 0 0 0 1 1 0 0 0 0 1 0 0 10 0 1131.5309 O94766 O94766 226 235 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes yes 2 0.0010293 121.5 By MS/MS 7 0 1 1 806890 806890 0 4306 348 4471 10399 7418 7418 1 14419 0 FEGQFSINK DNSMKIPLNNGAGCRFEGQFSINKVPGNFH NGAGCRFEGQFSINKVPGNFHVSTHSATAQ R F E N K V 0 0 1 0 0 1 1 1 0 1 0 1 0 2 0 1 0 0 0 0 0 0 9 0 1068.524 Q969X5 Q969X5 117 125 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2 0.0012323 138.08 By MS/MS 8 0 1 1 1287200 1287200 0 4307 2110 4472 10400 7419;7420 7419 2 84919 0 FEGTTSLGEVR VRKSMSHQAAIASQRFEGTTSLGEVRTPSQ ASQRFEGTTSLGEVRTPSQLSDNNCRQ___ R F E V R T 0 1 0 0 0 0 2 2 0 0 1 0 0 1 0 1 2 0 0 1 0 0 11 0 1194.5881 Q4G0F5 Q4G0F5 314 324 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 2 0.0056117 105.17 By MS/MS By matching 6 0.816 1 1 1 1 2 2313800 2259900 53882 4308 1575 4473 10401;10402;10403 7421 7421 1 40385 162660 FEIGEGENLDLPYGLER EGYYKDKLFDQRELRFEIGEGENLDLPYGL IGEGENLDLPYGLERAIQRMEKGEHSIVYL R F E E R A 0 1 1 1 0 0 4 3 0 1 3 0 0 1 1 0 0 0 1 0 0 0 17 0 1949.9371 Q02790 Q02790 190 206 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 7.103E-25 218.21 By MS/MS 6 0 1 1 3670100 3670100 0 4309 1255 4474 10404 7422 7422 1 28619 0 FEINLISPDTK SDSEKNRTMLFQVGRFEINLISPDTKSVVL QVGRFEINLISPDTKSVVLEKNFKDISSCS R F E T K S 0 0 1 1 0 0 1 0 0 2 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1275.6711 O60343 O60343 364 374 TBC1D4 TBC1 domain family member 4 yes yes 2 3.3214E-05 171.92 By MS/MS 3 0 1 1 965460 965460 0 4310 246 4475 10405 7423 7423 1 25203 0 FEIWDTAGQER AFLTQTVCLDDTTVKFEIWDTAGQERYHSL TTVKFEIWDTAGQERYHSLAPMYYRGAQAA K F E E R Y 1 1 0 1 0 1 2 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 11 0 1350.6204 P20339;P51148;P61020 P51148 72 82 RAB5A;RAB5C;RAB5B Ras-related protein Rab-5A;Ras-related protein Rab-5C;Ras-related protein Rab-5B no no 2 6.5609E-07 213.8 By MS/MS 8.5 0.5 1 1 2 2300000 2300000 0 4311 959;640;1084 4476 10406;10407 7424 7424 1 1226800 0 FEKEAAEMGK LIYKCGGIDKRTIEKFEKEAAEMGKGSFKY RTIEKFEKEAAEMGKGSFKYAWVLDKLKAE K F E G K G 2 0 0 0 0 0 3 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 10 1 1138.5329 Q5VTE0;P68104;Q05639 Q5VTE0 42 51 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 3 0.0005833 132.32 By MS/MS 7 0 1 1 843590 843590 0 4312 1184 4477 10408 7425 7425 1 15075 0 FELDTSER EVVFVAEPDNKNVYKFELDTSERKIEFDSA DNKNVYKFELDTSERKIEFDSASGTYTLYL K F E E R K 0 1 0 1 0 0 2 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 995.45599 P04844 P04844 461 468 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.018258 109.01 By MS/MS 1.5 0.5 1 1 2 748920 748920 0 4313 459 4478 10409;10410 7426 7426 1 36816 0 FELLCSPLFNK LYEGQDFDCNVSRARFELLCSPLFNKCIEA SRARFELLCSPLFNKCIEAIRGLLDQNGFT R F E N K C 0 0 1 0 1 0 1 0 0 0 3 1 0 2 1 1 0 0 0 0 0 0 11 0 1366.6955 Q0VDF9 Q0VDF9 300 310 HSPA14 Heat shock 70 kDa protein 14 yes yes 2 0.00012535 157.99 By MS/MS 6 0 1 1 356730 356730 0 4314 1298 4479 10411 7427 7427 1 2781.8 0 FELQDSGSSLLPK LGHEGKMAVEGVLKRFELQDSGSSLLPKEI KRFELQDSGSSLLPKEIVKVEKMMENHVSQ R F E P K E 0 0 0 1 0 1 1 1 0 0 3 1 0 1 1 3 0 0 0 0 0 0 13 0 1419.7246 A3KMH1 A3KMH1 362 374 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0062164 100.38 By MS/MS 3 0.816 1 1 1 3 580420 580420 0 4315 13 4480 10412;10413;10414 7428 7428 1 22894 0 FELTGIPPAPR EGERAMTKDNNLLGKFELTGIPPAPRGVPQ LLGKFELTGIPPAPRGVPQIEVTFDIDANG K F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 3 0 1 0 0 0 0 0 11 0 1196.6554 P11142 P11142 459 469 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.028501 85.862 By MS/MS 5 0 1 1 0 0 0 4316 546 4481 10415 7429 7429 1 0 0 FEMEQNLR DIDNTRMTLDDFRIKFEMEQNLRQGVDADI LDDFRIKFEMEQNLRQGVDADINGLRQVLD K F E L R Q 0 1 1 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 1065.4913 P35527;CON__P35527 P35527 243 250 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0010648 163.9 By MS/MS 4.23 1.89 1 2 2 2 2 2 2 13 1530100 0 1530100 + 4317 791 4482;4483 10416;10417;10418;10419;10420;10421;10422;10423;10424;10425;10426;10427;10428 7430;7431;7432;7433;7434;7435;7436;7437;7438 7434 533 9 0 3411900 FENAFLSHVVSQHQALLGTIR VRGYLDKLEPSKITKFENAFLSHVVSQHQA SHVVSQHQALLGTIRADGKISEQSDAKLKE K F E I R A 2 1 1 0 0 2 1 1 2 1 3 0 0 2 0 2 1 0 0 2 0 0 21 0 2366.2495 P25705 P25705 507 527 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 6.6232E-06 130.89 By MS/MS 6 0 1 1 3370300 3370300 0 4318 687 4484 10429 7439 7439 1 26282 0 FENEEFFR ______________________________ VPDQRSKFENEEFFRKLSRECEIKYTGFRD K F E F R K 0 1 1 0 0 0 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 8 0 1116.4876 Q13951 Q13951 12 19 CBFB Core-binding factor subunit beta yes yes 2 0.013709 114.89 By MS/MS 9 0 1 1 224940 224940 0 4319 1404 4485 10430 7440 7440 1 129090 0 FENLGIQPPK ELVEAIVLPMNHKEKFENLGIQPPKGVLMY NHKEKFENLGIQPPKGVLMYGPPGTGKTLL K F E P K G 0 0 1 0 0 1 1 1 0 1 1 1 0 1 2 0 0 0 0 0 0 0 10 0 1141.6132 P17980 P17980 212 221 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.00093624 125.82 By MS/MS 6 0 1 1 1503100 1503100 0 4320 618 4486 10431 7441 7441 1 11721 0 FENLGVSSLGER NEITGALLPCLDESRFENLGVSSLGERKKL ESRFENLGVSSLGERKKLLSYIQRLVQIHV R F E E R K 0 1 1 0 0 0 2 2 0 0 2 0 0 1 0 2 0 0 0 1 0 0 12 0 1306.6517 Q9Y3Z3 Q9Y3Z3 86 97 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 2 0.052017 75.479 By MS/MS 5 0 1 1 993350 993350 0 4321 2944 4487 10432 7442 7442 1 40831 0 FEQKGFR PDGVQRGLVGEIIKRFEQKGFRLVAMKFLR LVGEIIKRFEQKGFRLVAMKFLRASEEHLK R F E F R L 0 1 0 0 0 1 1 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 7 1 910.4661 P15531;P22392;O60361 P22392 28 34 NME1;NME2;NME2P1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase no no 3 0.038799 96.19 By MS/MS 10 0 1 1 93754 93754 0 4322 659;599 4488 10433 7443 7443 1 99650 0 FESFPAGSTLIFYK SNGFKNGQNAAVVHRFESFPAGSTLIFYKY RFESFPAGSTLIFYKYCDHENAAFKDVALV R F E Y K Y 1 0 0 0 0 0 1 1 0 1 1 1 0 3 1 2 1 0 1 0 0 0 14 0 1605.8079 Q5JTV8 Q5JTV8 481 494 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 4.5187E-06 177.44 By MS/MS 6 0 1 1 1317500 1317500 0 4323 1610 4489 10434 7444 7444 1 10274 0 FESPEVAER IKMENGKSKGCGVVKFESPEVAERACRMMN GCGVVKFESPEVAERACRMMNGMKLSGREI K F E E R A 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1062.4982 P52272 P52272 699 707 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0091407 106.68 By MS/MS 5 0 1 1 2898700 2898700 0 4324 982 4490 10435 7445 7445 1 119150 0 FETFCLDPSLVTK TSSSQVKDNKPLVERFETFCLDPSLVTKQA ERFETFCLDPSLVTKQANLVHFPPGFQPIP R F E T K Q 0 0 0 1 1 0 1 0 0 0 2 1 0 2 1 1 2 0 0 1 0 0 13 0 1555.7592 Q9UHB9 Q9UHB9 558 570 SRP68 Signal recognition particle subunit SRP68 yes yes 2 3.579E-25 236.22 By MS/MS 4.67 0.471 1 2 3 5849600 5849600 0 4325 2779 4491 10436;10437;10438 7446;7447 7446 2 239520 0 FEWELPLDEAQR TSQKKRTLSPEFNERFEWELPLDEAQRRKL NERFEWELPLDEAQRRKLDVSVKSNSSFMS R F E Q R R 1 1 0 1 0 1 3 0 0 0 2 0 0 1 1 0 0 1 0 0 0 0 12 0 1531.7307 Q9BSJ8 Q9BSJ8 1041 1052 ESYT1 Extended synaptotagmin-1 yes yes 2 0.0055434 107.55 By MS/MS 4 0.816 1 1 1 3 569260 569260 0 4326 2339 4492 10439;10440;10441 7448;7449 7448 2 15531 0 FFADDTQAALTK SNLYNNIRLFEKGMKFFADDTQAALTKHLL GMKFFADDTQAALTKHLLKSVCTDITNLIF K F F T K H 3 0 0 2 0 1 0 0 0 0 1 1 0 2 0 0 2 0 0 0 0 0 12 0 1326.6456 O94874 O94874 560 571 UFL1 E3 UFM1-protein ligase 1 yes yes 2 2.4079E-05 171.67 By MS/MS 5.5 1.12 1 1 1 1 4 13926000 13926000 0 4327 354 4493 10442;10443;10444;10445 7450;7451 7451 2 535790 0 FFCIVEGLR LEALTSAGEEKKIDRFFCIVEGLRHNSVQL EKKIDRFFCIVEGLRHNSVQLQVACMQLIN R F F L R H 0 1 0 0 1 0 1 1 0 1 1 0 0 2 0 0 0 0 0 1 0 0 9 0 1139.5798 Q9NSV4 Q9NSV4 323 331 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.0020321 129.47 By MS/MS 3.5 0.5 1 1 2 241710 241710 0 4328 2628 4494 10446;10447 7452 7452 1 6378.8 0 FFDDDLLVSTSR MPASVLTGNVIIETKFFDDDLLVSTSRVRL ETKFFDDDLLVSTSRVRLFYV_________ K F F S R V 0 1 0 3 0 0 0 0 0 0 2 0 0 2 0 2 1 0 0 1 0 0 12 0 1413.6776 O43924 O43924 133 144 PDE6D Retinal rod rhodopsin-sensitive cGMP 3,5-cyclic phosphodiesterase subunit delta yes yes 2 1.3875E-12 232.88 By MS/MS 10 0 1 1 0 0 0 4329 234 4495 10448 7453 7453 1 0 0 FFDDPMLLELAK TRRRKGLSEDVSISKFFDDPMLLELAKQDV ISKFFDDPMLLELAKQDVVLNYPM______ K F F A K Q 1 0 0 2 0 0 1 0 0 0 3 1 1 2 1 0 0 0 0 0 0 0 12 0 1437.7214 Q15029 Q15029 952 963 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00020841 147.74 By MS/MS 4 0.707 1 2 1 4 1522400 1522400 0 4330 1466 4496;4497 10449;10450;10451;10452 7454;7455 7454 1146 2 41946 0 FFDEESYSLLR SLDHKSAHAGTYEVRFFDEESYSLLRKAQR YEVRFFDEESYSLLRKAQRNNEDISIIPPL R F F L R K 0 1 0 1 0 0 2 0 0 0 2 0 0 2 0 2 0 0 1 0 0 0 11 0 1404.6561 P51571 P51571 106 116 SSR4 Translocon-associated protein subunit delta yes yes 2 1.9907E-30 269.99 By MS/MS 8.29 3.06 1 1 1 4 7 17760000 17760000 0 4331 968 4498 10453;10454;10455;10456;10457;10458;10459 7456;7457;7458;7459;7460;7461;7462 7459 7 17017000 0 FFDEESYSLLRK SLDHKSAHAGTYEVRFFDEESYSLLRKAQR EVRFFDEESYSLLRKAQRNNEDISIIPPLF R F F R K A 0 1 0 1 0 0 2 0 0 0 2 1 0 2 0 2 0 0 1 0 0 0 12 1 1532.7511 P51571 P51571 106 117 SSR4 Translocon-associated protein subunit delta yes yes 2;3 4.1633E-12 180.09 By MS/MS 9.5 0.5 2 2 4 4139700 4139700 0 4332 968 4499 10460;10461;10462;10463 7463;7464 7464 1 3902800 0 FFDTELENLER QMHKRFEQEINAKKKFFDTELENLERQQKQ AKKKFFDTELENLERQQKQQVEKMEQDHAV K F F E R Q 0 1 1 1 0 0 3 0 0 0 2 0 0 2 0 0 1 0 0 0 0 0 11 0 1411.662 O94804 O94804 608 618 STK10 Serine/threonine-protein kinase 10 yes yes 2 5.1867E-16 219.5 By MS/MS 3 0 1 1 369850 369850 0 4333 350 4500 10464 7465 7465 1 9655 0 FFEDYGLFMR FFIDQSKKDAEKYAKFFEDYGLFMREGIVT EKYAKFFEDYGLFMREGIVTATEQEVKEDI K F F M R E 0 1 0 1 0 0 1 1 0 0 1 0 1 3 0 0 0 0 1 0 0 0 10 0 1323.5958 Q12931 Q12931 440 449 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.00047353 137.14 By MS/MS 5 0.816 1 1 1 3 2539900 2539900 0 4334 1316 4501 10465;10466;10467 7466 7466 1043 1 88963 0 FFEFGSLEQK YQLMVDVFGNYVIQKFFEFGSLEQKLALAE YVIQKFFEFGSLEQKLALAERIRGHVLSLA K F F Q K L 0 0 0 0 0 1 2 1 0 0 1 1 0 3 0 1 0 0 0 0 0 0 10 0 1230.5921 Q14671 Q14671 905 914 PUM1 Pumilio homolog 1 yes yes 2 0.00014303 175.91 By MS/MS By matching 3.75 0.829 2 1 1 3 1 1883500 1814500 68930 4335 1438 4502 10468;10469;10470;10471 7467;7468 7467 2 50997 98791 FFEHFIEGGR YLRLLTSGYLQRESKFFEHFIEGGRTVKEF QRESKFFEHFIEGGRTVKEFCQQEVEPMCK K F F G R T 0 1 0 0 0 0 2 2 1 1 0 0 0 3 0 0 0 0 0 0 0 0 10 0 1237.588 Q96FW1 Q96FW1 189 198 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 2;3 0.0034127 107.21 By MS/MS 8 0 2 2 861900 861900 0 4336 2173 4503 10472;10473 7469;7470 7469 2 56859 0 FFENYNQSLEK LALLSAVSASIKDEKFFENYNQSLEKWSLS KDEKFFENYNQSLEKWSLSQAVTGLIDTGR K F F E K W 0 0 2 0 0 1 2 0 0 0 1 1 0 2 0 1 0 0 1 0 0 0 11 0 1417.6514 Q6PGP7 Q6PGP7 1316 1326 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 2.7542E-16 225.93 By MS/MS 3 0 1 1 1379300 1379300 0 4337 1714 4504 10474 7471 7471 1 36006 0 FFGEDAEIAAR HKDAVLCVECGYKYRFFGEDAEIAARELNI YKYRFFGEDAEIAARELNIYCHLDHNFMTA R F F A R E 3 1 0 1 0 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1224.5775 P20585 P20585 258 268 MSH3 DNA mismatch repair protein Msh3 yes yes 2 0.00013311 157.66 By MS/MS 3 0 1 1 674170 674170 0 4338 642 4505 10475 7472 7472 1 17599 0 FFGGYVPEMVLTPDDQR NLGNFINRAGMFVSKFFGGYVPEMVLTPDD GGYVPEMVLTPDDQRLLAHVTLELQHYHQL K F F Q R L 0 1 0 2 0 1 1 2 0 0 1 0 1 2 2 0 1 0 1 2 0 0 17 0 1969.9244 P56192 P56192 664 680 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0067185 94.402 By MS/MS 4 0 2 2 1997300 1997300 0 4339 1042 4506;4507 10476;10477 7473;7474 7473 811 2 54524 0 FFHETEAPR EETIKVWKQRTHVMRFFHETEAPRPKDFLS RTHVMRFFHETEAPRPKDFLSKFYVGHDP_ R F F P R P 1 1 0 0 0 0 2 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 9 0 1132.5302 P56556 P56556 106 114 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 2;3 0.0011492 141.52 By MS/MS 10 0 2 2 1351300 1351300 0 4340 1048 4508 10478;10479 7475;7476 7476 2 1436300 0 FFHETEAPRPK EETIKVWKQRTHVMRFFHETEAPRPKDFLS HVMRFFHETEAPRPKDFLSKFYVGHDP___ R F F P K D 1 1 0 0 0 0 2 0 1 0 0 1 0 2 2 0 1 0 0 0 0 0 11 1 1357.6779 P56556 P56556 106 116 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 2;3;4 0.00078778 160.82 By MS/MS By matching 9.8 0.4 1 4 4 1 5295700 5269300 26419 4341 1048 4509 10480;10481;10482;10483;10484 7477;7478;7479 7479 3 5572500 677640 FFIGQFSDDR TRAYGVCFVDTSLGKFFIGQFSDDRHCSRF TSLGKFFIGQFSDDRHCSRFRTLVAHYPPV K F F D R H 0 1 0 2 0 1 0 1 0 1 0 0 0 3 0 1 0 0 0 0 0 0 10 0 1230.5669 P52701 P52701 568 577 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.00086755 139.38 By MS/MS 3.5 0.5 1 1 2 995200 995200 0 4342 989 4510 10485;10486 7480 7480 1 26112 0 FFLAPCVEPGR EEFQLLHIFRRDALRFFLAPCVEPGRAGTF DALRFFLAPCVEPGRAGTFVFTVPAMQEYL R F F G R A 1 1 0 0 1 0 1 1 0 0 1 0 0 2 2 0 0 0 0 1 0 0 11 0 1291.6383 Q86UT6 Q86UT6 476 486 NLRX1 NLR family member X1 yes yes 2 0.0029577 116.3 By MS/MS 3.6 1.85 1 1 1 1 1 5 4641100 4641100 0 4343 1825 4511 10487;10488;10489;10490;10491 7481;7482;7483 7482 3 126660 0 FFLGDLCSR NVFDIQQGFDNPQVRFFLGDLCSRQDLYPA DNPQVRFFLGDLCSRQDLYPALKGVNTVFH R F F S R Q 0 1 0 1 1 0 0 1 0 0 2 0 0 2 0 1 0 0 0 0 0 0 9 0 1113.5277 Q15738 Q15738 80 88 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.0091407 106.68 By MS/MS 8.5 1.12 1 1 1 1 4 15724000 15724000 0 4344 1515 4512 10492;10493;10494;10495 7484;7485 7484 2 431390 0 FFLLENVR LVVSFLSYCDYYRPRFFLLENVRNFVSFKR CDYYRPRFFLLENVRNFVSFKRSMVLKLTL R F F V R N 0 1 1 0 0 0 1 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 8 0 1036.5706 P26358 P26358 1262 1269 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.02209 116.9 By MS/MS 3.5 1.12 1 1 1 1 4 501460 501460 0 4345 693 4513 10496;10497;10498;10499 7486 7486 1 16247 0 FFLSSGLIDK VESFMATAPFVQIGRFFLSSGLIDKVDNFK VQIGRFFLSSGLIDKVDNFKSLSLSKLEDP R F F D K V 0 0 0 1 0 0 0 1 0 1 2 1 0 2 0 2 0 0 0 0 0 0 10 0 1125.607 Q9BTV4 Q9BTV4 190 199 TMEM43 Transmembrane protein 43 yes yes 2 0.00044034 160.82 By MS/MS 7.5 0.5 1 1 2 1169800 1169800 0 4346 2353 4514 10500;10501 7487 7487 1 28749 0 FFMGNQVLK FSVLGFCKSSQVQRRFFMGNQVLKVFAARD SQVQRRFFMGNQVLKVFAARDDEAAAVALS R F F L K V 0 0 1 0 0 1 0 1 0 0 1 1 1 2 0 0 0 0 0 1 0 0 9 0 1082.5583 P13010 P13010 355 363 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.006955 104.45 By MS/MS 5 0 1 1 1096900 1096900 0 4347 570 4515 10502 7488 7488 357 1 45085 0 FFNANQWADIFQASGAK PSFKYEDFGPLFTAKFFNANQWADIFQASG NANQWADIFQASGAKYIVLTSKHHEGFTLW K F F A K Y 4 0 2 1 0 2 0 1 0 1 0 1 0 3 0 1 0 1 0 0 0 0 17 0 1913.906 Q9BTY2 Q9BTY2 111 127 FUCA2 Plasma alpha-L-fucosidase yes yes 2 1.6808E-33 244.71 By MS/MS 6 0 1 1 757380 757380 0 4348 2356 4516 10503 7489;7490 7489 2 5906 0 FFQADIAENALK RGYIAQYLNKETIGKFFQADIAENALKNSS IGKFFQADIAENALKNSSETEIPTVSVLAD K F F L K N 3 0 1 1 0 1 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 12 0 1365.6929 Q5TEU4 Q5TEU4 115 126 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 yes yes 2 0.00038483 153.95 By MS/MS 7 0 1 1 840390 840390 0 4349 1640 4517 10504 7491 7491 1 15018 0 FFQEENTEK DYIRTQIISKKINTKFFQEENTEKLKLKYY KKINTKFFQEENTEKLKLKYYNLMIQLDQH K F F E K L 0 0 1 0 0 1 3 0 0 0 0 1 0 2 0 0 1 0 0 0 0 0 9 0 1170.5193 O00232 O00232 213 221 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.00012751 168.83 By MS/MS By matching 6.75 0.829 2 1 1 3 1 7367800 7342400 25491 4350 81 4518 10505;10506;10507;10508 7492 7492 1 64115 78178 FFQEENTEKLK DYIRTQIISKKINTKFFQEENTEKLKLKYY INTKFFQEENTEKLKLKYYNLMIQLDQHEG K F F L K L 0 0 1 0 0 1 3 0 0 0 1 2 0 2 0 0 1 0 0 0 0 0 11 1 1411.6983 O00232 O00232 213 223 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2;3 3.1906E-21 241.13 By MS/MS By matching 6 0 3 2 1 26992000 26972000 20136 4351 81 4519 10509;10510;10511 7493;7494 7494 2 210330 61755 FFQELPGSDPVFK ILVEDELSSPVVVFRFFQELPGSDPVFKAV FRFFQELPGSDPVFKAVPVPNMTPSGVGRE R F F F K A 0 0 0 1 0 1 1 1 0 0 1 1 0 3 2 1 0 0 0 1 0 0 13 0 1509.7504 Q6P996;Q6P474 Q6P996 394 406 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 2 0.0027241 136.53 By MS/MS 5 0.816 1 1 1 3 3937400 3937400 0 4352 1712 4520 10512;10513;10514 7495 7495 1 104730 0 FFQELSK FLEEIQIKEPAEKQKFFQELSKSLDAFPED KEPAEKQKFFQELSKSLDAFPEDFCRHKVL K F F S K S 0 0 0 0 0 1 1 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 7 0 897.45962 Q96KG9 Q96KG9 293 299 SCYL1 N-terminal kinase-like protein yes yes 2 0.026464 117.4 By MS/MS 4 0 1 1 1124500 1124500 0 4353 2220 4521 10515 7496 7496 1 30698 0 FFSEQQQSK MKAKQRAEVLQSTQRFFSEQQQSKQIGGGK LQSTQRFFSEQQQSKQIGGGKAQKVDSDSS R F F S K Q 0 0 0 0 0 3 1 0 0 0 0 1 0 2 0 2 0 0 0 0 0 0 9 0 1127.5247 Q9Y520 Q9Y520 2824 2832 PRRC2C Protein PRRC2C yes yes 2 0.0010955 139.98 By MS/MS 1.5 0.5 1 1 2 336710 336710 0 4354 2963 4522 10516;10517 7497 7497 1 16557 0 FFTEILR AFLHLGQNNFAEAHRFFTEILRMDPRNAVA NNFAEAHRFFTEILRMDPRNAVANNNAAVC R F F L R M 0 1 0 0 0 0 1 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 7 0 924.5069 Q8WVT3 Q8WVT3 642 648 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 0.045203 104.45 By MS/MS 4.5 0.5 1 1 2 316650 316650 0 4355 2034 4523 10518;10519 7498 7498 1 9125.1 0 FFTFEQYKK ILPPILAETPKRAVKFFTFEQYKKLLGYVS PKRAVKFFTFEQYKKLLGYVSLSPALTFAI K F F K K L 0 0 0 0 0 1 1 0 0 0 0 2 0 3 0 0 1 0 1 0 0 0 9 1 1236.6179 Q9BQT8 Q9BQT8 91 99 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 0.034295 107.29 By MS/MS 8 0 1 1 350800 350800 0 4356 2319 4524 10520 7499 7499 1 23142 0 FFTGQITAAGK AGYKAVVLAANHFGRFFTGQITAAGKVPPA HFGRFFTGQITAAGKVPPAKILIVGGGVAG R F F G K V 2 0 0 0 0 1 0 2 0 1 0 1 0 2 0 0 2 0 0 0 0 0 11 0 1139.5975 Q13423 Q13423 214 224 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.0047323 112.83 By MS/MS 1 0 1 1 0 0 0 4357 1367 4525 10521 7500 7500 1 0 0 FFVADTANEALEAAK QSKKLMSDNGVRVQRFFVADTANEALEAAK FFVADTANEALEAAKRLNAKEIVLKAQILA R F F A K R 5 0 1 1 0 0 2 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 15 0 1595.7831 Q96I99 Q96I99 59 73 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 5.3933E-10 212.68 By MS/MS 7 0 1 1 1236700 1236700 0 4358 2200 4526 10522 7501 7501 1 22100 0 FFVAPFPEVFGK HQGLPQEVLNENLLRFFVAPFPEVFGKEKV LLRFFVAPFPEVFGKEKVNELSKDIGSEST R F F G K E 1 0 0 0 0 0 1 1 0 0 0 1 0 4 2 0 0 0 0 2 0 0 12 0 1383.7227 CON__P02662 CON__P02662 23 34 yes yes 2 0.0019709 122.26 By MS/MS 5.5 0.5 1 1 2 5891000 5891000 0 + 4359 37 4527 10523;10524 7502 7502 1 65194 0 FFVMTSLR LTATVLKQGSNQAIRFFVMTSLRNWYRGDN GSNQAIRFFVMTSLRNWYRGDNPNKPMNPL R F F L R N 0 1 0 0 0 0 0 0 0 0 1 0 1 2 0 1 1 0 0 1 0 0 8 0 999.52117 P53007 P53007 199 206 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0007607 176.66 By MS/MS 8.33 0.471 2 1 3 7356500 7356500 0 4360 996 4528;4529 10525;10526;10527 7503;7504 7504 750 2 539680 0 FFVSSSQGR TDSEDKALMNGSESRFFVSSSQGRSELHIE NGSESRFFVSSSQGRSELHIENLNMEADPG R F F G R S 0 1 0 0 0 1 0 1 0 0 0 0 0 2 0 3 0 0 0 1 0 0 9 0 1013.493 P35613 P35613 274 282 BSG Basigin yes yes 2 0.004042 117.81 By MS/MS 7 0.816 1 1 1 3 13783000 13783000 0 4361 797 4530 10528;10529;10530 7505;7506 7506 2 317230 0 FFYSDQNVDSR EQGVEEHETLLLRRKFFYSDQNVDSRDPVQ LRRKFFYSDQNVDSRDPVQLNLLYVQARDD K F F S R D 0 1 1 2 0 1 0 0 0 0 0 0 0 2 0 2 0 0 1 1 0 0 11 0 1376.5997 Q9Y490;Q9Y4G6 Q9Y490 197 207 TLN1;TLN2 Talin-1;Talin-2 yes no 2 1.3597E-10 199.33 By MS/MS 2.5 0.5 1 1 2 401800 401800 0 4362 2947 4531 10531;10532 7507 7507 1 16935 0 FGAGTLK LREGNQIPGFPDRKRFGAGTLKSLHYD___ PGFPDRKRFGAGTLKSLHYD__________ R F G L K S 1 0 0 0 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 7 0 692.38573 Q5HYI8 Q5HYI8 225 231 RABL3 Rab-like protein 3 yes yes 2 0.020871 123.99 By MS/MS 8.5 0.5 1 1 2 3845200 3845200 0 4363 1601 4532 10533;10534 7508 7508 1 372820 0 FGALTAEK ILQCHGELDPMVPVRFGALTAEKLRSVVTP DPMVPVRFGALTAEKLRSVVTPARVQFKTY R F G E K L 2 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 8 0 835.44397 O95372 O95372 183 190 LYPLA2 Acyl-protein thioesterase 2 yes yes 2 0.011773 117.4 By MS/MS 8.5 0.5 1 1 2 1588800 1588800 0 4364 387 4533 10535;10536 7509 7509 1 611740 0 FGAPPHAGGGIGLER GIDLEKIKAYIDSFRFGAPPHAGGGIGLER FGAPPHAGGGIGLERVTMLFLGLHNVRQTS R F G E R V 2 1 0 0 0 0 1 5 1 1 1 0 0 1 2 0 0 0 0 0 0 0 15 0 1434.7368 P14868 P14868 461 475 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.0029995 110.51 By MS/MS 3.5 2.5 1 1 2 5119900 5119900 0 4365 594 4534 10537;10538 7510;7511 7511 2 51719 0 FGAPQKDVK LMGLYHGQVLCKKNKFGAPQKDVKHLAILG LCKKNKFGAPQKDVKHLAILGAGLMGAGIA K F G V K H 1 0 0 1 0 1 0 1 0 0 0 2 0 1 1 0 0 0 0 1 0 0 9 1 988.53418 P40939 P40939 354 362 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.017115 86.136 By MS/MS 4.5 0.5 1 1 2 1586800 1586800 0 4366 835 4535 10539;10540 7512 7512 1 60313 0 FGAQQDTIEVPEK LKQLVAEQVTYQRNRFGAQQDTIEVPEKDL NRFGAQQDTIEVPEKDLVDKARQINIHNLS R F G E K D 1 0 0 1 0 2 2 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 13 0 1460.7147 P49736 P49736 851 863 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00024429 146.5 By MS/MS 4 0 1 1 458780 458780 0 4367 928 4536 10541 7513 7513 1 12524 0 FGAQQDTIEVPEKDLVDK LKQLVAEQVTYQRNRFGAQQDTIEVPEKDL QQDTIEVPEKDLVDKARQINIHNLSAFYDS R F G D K A 1 0 0 3 0 2 2 1 0 1 1 2 0 1 1 0 1 0 0 2 0 0 18 1 2031.0161 P49736 P49736 851 868 MCM2 DNA replication licensing factor MCM2 yes yes 3 0.0092227 74.993 By MS/MS 3.5 0.5 1 1 2 2937900 2937900 0 4368 928 4537 10542;10543 7514 7514 1 79258 0 FGAVEGAVAK TEALASFDYIVREGKFGAVEGAVAKYMGAA VREGKFGAVEGAVAKYMGAAAMYLISKRLK K F G A K Y 3 0 0 0 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 2 0 0 10 0 947.50763 Q9H7Z7 Q9H7Z7 270 279 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 2 0.028945 86.136 By MS/MS 8 0 1 1 2198900 2198900 0 4369 2519 4538 10544 7515 7515 1 145060 0 FGDDVVEIIK LAEISHRLEEFYTERFGDDVVEIIKDSNPV FYTERFGDDVVEIIKDSNPVDKSKLDSQKA R F G I K D 0 0 0 2 0 0 1 1 0 2 0 1 0 1 0 0 0 0 0 2 0 0 10 0 1133.5968 Q96HP0 Q96HP0 1794 1803 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.011826 98.048 By MS/MS 2 0 1 1 97232 97232 0 4370 2193 4539 10545 7516 7516 1 4833 0 FGDFVLK LGPLVTGLYDVQAFKFGDFVLKSGLSSPIY LYDVQAFKFGDFVLKSGLSSPIYIDLRGIV K F G L K S 0 0 0 1 0 0 0 1 0 0 1 1 0 2 0 0 0 0 0 1 0 0 7 0 824.44324 P11172 P11172 23 29 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 0.021851 121.29 By MS/MS 6 0 1 1 1456000 1456000 0 4371 548 4540 10546 7517 7517 1 11354 0 FGDLDEQEFVYKEPAITK RMFGTYFRVGFYGTKFGDLDEQEFVYKEPA LDEQEFVYKEPAITKLAEISHRLEGFYGER K F G T K L 1 0 0 2 0 1 3 1 0 1 1 2 0 2 1 0 1 0 1 1 0 0 18 1 2128.0365 Q96N67;Q8NF50 Q96N67 1852 1869 DOCK7;DOCK8 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 8 yes no 3 0.013728 67.994 By MS/MS 4 1.41 1 1 1 1 1 5 3249700 3249700 0 4372 2230 4541 10547;10548;10549;10550;10551 7518;7519 7518 2 70369 0 FGDLILK SELQLPFQACLKVEKFGDLILKATEPQMVL QACLKVEKFGDLILKATEPQMVLFNLYDDW K F G L K A 0 0 0 1 0 0 0 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 804.47454 Q6P2Q9 Q6P2Q9 1902 1908 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.036253 110.63 By MS/MS 2 0.816 1 1 1 3 834030 834030 0 4373 1706 4542 10552;10553;10554 7520;7521 7520 2 38182 0 FGDPECQVILPLLK MLTKNGPKVLEFNCRFGDPECQVILPLLKS RFGDPECQVILPLLKSDLYEVIQSTLDGLL R F G L K S 0 0 0 1 1 1 1 1 0 1 3 1 0 1 2 0 0 0 0 1 0 0 14 0 1627.8644 P22102 P22102 293 306 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00041688 134.49 By MS/MS 4 0 1 1 725980 725980 0 4374 655 4543 10555 7522 7522 1 19818 0 FGDSNTVMR LYDAKRRQDSLESMKFGDSNTVMRFLNEQK SLESMKFGDSNTVMRFLNEQKNLHSEISGK K F G M R F 0 1 1 1 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 9 0 1025.46 P15924 P15924 917 925 DSP Desmoplakin yes yes 2 0.018008 93.162 By MS/MS By MS/MS 3 1.1 2 2 1 2 3 342120 234990 107130 4375 603 4544 10556;10557;10558;10559;10560 7523;7524;7525;7526 7526 388 4 10581 181470 FGEDVVEVIK LAEISHRLEGFYGERFGEDVVEVIKDSNPV FYGERFGEDVVEVIKDSNPVDKCKLDPNKA R F G I K D 0 0 0 1 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 3 0 0 10 0 1133.5968 Q96N67 Q96N67 1885 1894 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 3.4876E-07 191.17 By MS/MS 3 1.41 1 1 1 1 1 5 1347100 1347100 0 4376 2230 4545 10561;10562;10563;10564;10565 7527 7527 1 54750 0 FGELGGFAAIQAK FQKEPHGWVVDLVNKFGELGGFAAIQAKLH NKFGELGGFAAIQAKLHSEDIELGAVSALI K F G A K L 3 0 0 0 0 1 1 3 0 1 1 1 0 2 0 0 0 0 0 0 0 0 13 0 1307.6874 Q9UPU5 Q9UPU5 288 300 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.053285 121.5 By MS/MS 2 0 1 1 122940 122940 0 4377 2854 4546 10566 7528 7528 0 6110.5 0 FGELVMTK IEQGSDAGYLCESQKFGELVMTKESKALMG YLCESQKFGELVMTKESKALMGLYHGQVLC K F G T K E 0 0 0 0 0 0 1 1 0 0 1 1 1 1 0 0 1 0 0 1 0 0 8 0 923.47864 P40939 P40939 327 334 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00067017 178.99 By MS/MS 5 0 1 1 1986000 1986000 0 4378 835 4547 10567 7529 7529 1 81635 0 FGEMQLDFR PTLLNCLMYKMSYYRFGEMQLDFRTPPGFD KMSYYRFGEMQLDFRTPPGFDRTRNAEIGN R F G F R T 0 1 0 1 0 1 1 1 0 0 1 0 1 2 0 0 0 0 0 0 0 0 9 0 1141.5226 Q8TCJ2 Q8TCJ2 725 733 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.00084319 138.08 By MS/MS 2 0.816 1 1 1 3 853220 853220 0 4379 1995 4548 10568;10569;10570 7530;7531 7530 1311 2 37858 0 FGEPVLAGFAR VAIEASNGASDYGNKFGEPVLAGFARSLGL YGNKFGEPVLAGFARSLGLQLPDGQRREWI K F G A R S 2 1 0 0 0 0 1 2 0 0 1 0 0 2 1 0 0 0 0 1 0 0 11 0 1162.6135 O15067 O15067 396 406 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 0.0001082 160.59 By MS/MS 3.5 0.5 1 1 2 844170 844170 0 4380 145 4549 10571;10572 7532 7532 1 22148 0 FGEVLEISGK RRRLAEWKATKLKNKFGEVLEISGKDYVQE KLKNKFGEVLEISGKDYVQEVTKAGEGLWV K F G G K D 0 0 0 0 0 0 2 2 0 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1077.5706 Q9H2J4 Q9H2J4 91 100 PDCL3 Phosducin-like protein 3 yes yes 2 0.00075438 134.25 By MS/MS 8 0 1 1 756740 756740 0 4381 2479 4550 10573 7533 7533 1 49922 0 FGEVVDCTIKTDPVTGR SWDTSKKDLTEYLSRFGEVVDCTIKTDPVT EVVDCTIKTDPVTGRSRGFGFVLFKDAASV R F G G R S 0 1 0 2 1 0 1 2 0 1 0 1 0 1 1 0 3 0 0 3 0 0 17 1 1892.9302 O14979 O14979 171 187 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 3 0.0038426 95.751 By MS/MS 7.5 0.5 1 1 2 5222800 5222800 0 4382 141 4551 10574;10575 7534 7534 1 128840 0 FGEVVDCTLK SWDTTKKDLKDYFSKFGEVVDCTLKLDPIT DYFSKFGEVVDCTLKLDPITGRSRGFGFVL K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 Q14103 Q14103 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 0.00028855 153.24 By MS/MS By matching 7.25 0.433 3 1 3 1 16139000 16127000 12701 4383 1406 4552 10576;10577;10578;10579 7535;7536;7537 7536 3 326700 52139 FGFAESIANQR KALENDQKVRKEGGKFGFAESIANQRITAF EGGKFGFAESIANQRITAFKMEKAPIDTSD K F G Q R I 2 1 1 0 0 1 1 1 0 1 0 0 0 2 0 1 0 0 0 0 0 0 11 0 1238.6044 Q06265 Q06265 282 292 EXOSC9 Exosome complex component RRP45 yes yes 2 0.0015739 125.97 By MS/MS 5 0 1 1 693320 693320 0 4384 1275 4553 10580 7538 7538 1 28498 0 FGFPEGSVELYAEK KGRRIRELTAVVQKRFGFPEGSVELYAEKV RFGFPEGSVELYAEKVATRGLCAIAQAESL R F G E K V 1 0 0 0 0 0 3 2 0 0 1 1 0 2 1 1 0 0 1 1 0 0 14 0 1571.7508 P23396 P23396 77 90 RPS3 40S ribosomal protein S3 yes yes 2 0.0075813 98.407 By MS/MS 8 0 1 1 574950 574950 0 4385 668 4554 10581 7539 7539 1 37929 0 FGFYEVFK WAPTFLGYSMQGLCKFGFYEVFKVLYSNML SMQGLCKFGFYEVFKVLYSNMLGEENTYLW K F G F K V 0 0 0 0 0 0 1 1 0 0 0 1 0 3 0 0 0 0 1 1 0 0 8 0 1035.5066 Q00325 Q00325 138 145 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.014636 113.7 By MS/MS 4.86 2.9 1 1 1 1 1 1 1 7 2807700 2807700 0 4386 1230 4555 10582;10583;10584;10585;10586;10587;10588 7540;7541 7540 2 176030 0 FGGALDAAAK LVSSLTSGLLTIGDRFGGALDAAAKMFSKA TIGDRFGGALDAAAKMFSKAFDSGIIPMEF R F G A K M 4 0 0 1 0 0 0 2 0 0 1 1 0 1 0 0 0 0 0 0 0 0 10 0 919.47633 P53396 P53396 935 944 ACLY ATP-citrate synthase yes yes 2 0.001807 117.89 By MS/MS 3 1.41 1 1 1 1 1 5 9993700 9993700 0 4387 1001 4556 10589;10590;10591;10592;10593 7542;7543;7544 7542 3 307090 0 FGGGNPELLTQMVSK AKHVAEDLGKVFGERFGGGNPELLTQMVSK FGGGNPELLTQMVSKGFLGRKSGKGFYIYQ R F G S K G 0 0 1 0 0 1 1 3 0 0 2 1 1 1 1 1 1 0 0 1 0 0 15 0 1576.7919 P40939 P40939 611 625 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 1.6412E-28 240.18 By MS/MS By matching 4.4 1.74 1 3 1 4 1 14558000 14522000 35926 4388 835 4557;4558 10594;10595;10596;10597;10598 7545;7546;7547 7547 586 3 557120 106300 FGGLAAGEDNGQR KVLQHEKQVYDIAAKFGGLAAGEDNGQRGY AKFGGLAAGEDNGQRGYLLTYVIAYIRDLA K F G Q R G 2 1 1 1 0 1 1 4 0 0 1 0 0 1 0 0 0 0 0 0 0 0 13 0 1290.5953 O00116 O00116 491 503 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 5.8857E-08 190.57 By MS/MS 5 0 1 1 5604900 5604900 0 4389 67 4559 10599 7548 7548 1 230380 0 FGGLVLSPVGK LARLGLVRCLRLGHRFGGLVLSPVGKQYAS LGHRFGGLVLSPVGKQYASPADRQLVAQSG R F G G K Q 0 0 0 0 0 0 0 3 0 0 2 1 0 1 1 1 0 0 0 2 0 0 11 0 1072.6281 Q9UJK0 Q9UJK0 93 103 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 2 0.0055566 105.4 By MS/MS 7 0 1 1 332260 332260 0 4390 2797 4560 10600 7549 7549 1 5937.6 0 FGGNPGGFGNQGGFGNSR EPKHNSNRQLERSGRFGGNPGGFGNQGGFG NPGGFGNQGGFGNSRGGGAGLGNNQGSNMG R F G S R G 0 1 3 0 0 1 0 8 0 0 0 0 0 3 1 1 0 0 0 0 0 0 18 0 1725.7608 Q13148 Q13148 276 293 TARDBP TAR DNA-binding protein 43 yes yes 2 1.9669E-43 253.06 By MS/MS 8 0.816 1 1 1 3 7825800 7825800 0 4391 1340 4561 10601;10602;10603 7550 7550 1 247800 0 FGGSGSQVDSAR KVPDDIYKTHLENNRFGGSGSQVDSARMNL NNRFGGSGSQVDSARMNLASSFVNGFVNAA R F G A R M 1 1 0 1 0 1 0 3 0 0 0 0 0 1 0 3 0 0 0 1 0 0 12 0 1166.5316 Q13200 Q13200 358 369 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 7.2201E-33 257.09 By MS/MS 5.5 1.12 1 1 1 1 4 9918500 9918500 0 4392 1347 4562 10604;10605;10606;10607 7551;7552 7551 2 257690 0 FGGTVTEVLLK LENDFFNSPPRKTVRFGGTVTEVLLKYKKG KTVRFGGTVTEVLLKYKKGETNDFELLKNQ R F G L K Y 0 0 0 0 0 0 1 2 0 0 2 1 0 1 0 0 2 0 0 2 0 0 11 0 1162.6598 Q9NYV6 Q9NYV6 52 62 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 yes yes 2 0.00055656 140.45 By MS/MS 5 0 1 1 575550 575550 0 4393 2700 4563 10608 7553 7553 1 23657 0 FGGVQELLNQQK DCRMGAGIAVLFKKKFGGVQELLNQQKKSG KKKFGGVQELLNQQKKSGEVAVLKRDGRYI K F G Q K K 0 0 1 0 0 3 1 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 12 0 1359.7147 Q9Y530 Q9Y530 52 63 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 2 1.9816E-16 217.66 By MS/MS 10 0 1 1 380500 380500 0 4394 2964 4564 10609 7554 7554 1 404430 0 FGIHPVAGR ADLVKMLTEQGKKVRFGIHPVAGRMPGQLN QGKKVRFGIHPVAGRMPGQLNVLLAEAGVP R F G G R M 1 1 0 0 0 0 0 2 1 1 0 0 0 1 1 0 0 0 0 1 0 0 9 0 952.52428 Q13423 Q13423 960 968 NNT NAD(P) transhydrogenase, mitochondrial yes yes 3 0.028043 81.296 By MS/MS 1 0 1 1 505500 505500 0 4395 1367 4565 10610 7555 7555 1 24698 0 FGIMGLYK SLRNILYLLHQRVRRFGIMGLYKGLEAKLL LHQRVRRFGIMGLYKGLEAKLLQTVLTAAL R F G Y K G 0 0 0 0 0 0 0 2 0 1 1 1 1 1 0 0 0 0 1 0 0 0 8 0 927.48881 O43808 O43808 261 268 SLC25A17 Peroxisomal membrane protein PMP34 yes yes 2 0.043321 86.113 By MS/MS 1 0 1 1 138870 138870 0 4396 224 4566 10611 7556 7556 1 6785.1 0 FGIQAQMVTTDFQK AMKGKNCVAIAADRRFGIQAQMVTTDFQKI RFGIQAQMVTTDFQKIFPMGDRLYIGLAGL R F G Q K I 1 0 0 1 0 3 0 1 0 1 0 1 1 2 0 0 2 0 0 1 0 0 14 0 1612.7919 P49720 P49720 28 41 PSMB3 Proteasome subunit beta type-3 yes yes 2 6.2174E-19 231.17 By MS/MS 9.33 0.471 2 1 3 2432400 2432400 0 4397 926 4567;4568 10612;10613;10614 7557;7558 7557 690 2 1438000 0 FGLCAYMSQGR DFPAGIPECGTDALRFGLCAYMSQGRDINL DALRFGLCAYMSQGRDINLDVNRILGYRHF R F G G R D 1 1 0 0 1 1 0 2 0 0 1 0 1 1 0 1 0 0 1 0 0 0 11 0 1288.5693 P26640 P26640 924 934 VARS Valine--tRNA ligase yes yes 2 0.0070927 98.033 By MS/MS 3 0 1 1 738420 738420 0 4398 699 4569 10615 7559 7559 467 1 19277 0 FGLEGCEVLIPALK RFEEFLQRKWSSEKRFGLEGCEVLIPALKT RFGLEGCEVLIPALKTIIDKSSENGVDYVI R F G L K T 1 0 0 0 1 0 2 2 0 1 3 1 0 1 1 0 0 0 0 1 0 0 14 0 1544.8273 Q02218 Q02218 278 291 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.0047558 118.28 By MS/MS 4 0 1 1 544960 544960 0 4399 1251 4570 10616 7560 7560 1 14877 0 FGLFSAEIK MREMAGAWHMTVEQKFGLFSAEIKEADPLA MTVEQKFGLFSAEIKEADPLAASEASQPKP K F G I K E 1 0 0 0 0 0 1 1 0 1 1 1 0 2 0 1 0 0 0 0 0 0 9 0 1010.5437 P42356;A4QPH2;Q8N8J0 P42356 1264 1272 PI4KA;PI4KAP2;PI4KAP1 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2;Putative inactive phosphatidylinositol 4-kinase alpha-like protein P1 yes no 2 0.0092599 106.42 By MS/MS 3 0.816 1 1 1 3 344040 344040 0 4400 850 4571 10617;10618;10619 7561;7562 7562 2 11955 0 FGLFTPGSR GRYVEFNLLYDRGTKFGLFTPGSRIESILM YDRGTKFGLFTPGSRIESILMSLPLTARWE K F G S R I 0 1 0 0 0 0 0 2 0 0 1 0 0 2 1 1 1 0 0 0 0 0 9 0 980.50797 P36551 P36551 405 413 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 0.0051581 123.98 By MS/MS 7.5 0.5 1 1 2 0 0 0 4401 807 4572 10620;10621 7563;7564 7563 2 0 0 FGLGSVAGAVGATAVYPIDLVK SARPVLLQVAESAYRFGLGSVAGAVGATAV GAVGATAVYPIDLVKTRMQNQRSTGSFVGE R F G V K T 4 0 0 1 0 0 0 4 0 1 2 1 0 1 1 1 1 0 1 4 0 0 22 0 2104.1568 Q9UJS0 Q9UJS0 332 353 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.033809 90.707 By MS/MS 6 0 1 1 395430 395430 0 4402 2798 4573 10622 7565 7565 0 3083.6 0 FGLLPLSMTSTR QEPHNILPLASSQIRFGLLPLSMTSTRKAK QIRFGLLPLSMTSTRKAKSTRNIETKAQVV R F G T R K 0 1 0 0 0 0 0 1 0 0 3 0 1 1 1 2 2 0 0 0 0 0 12 0 1321.7064 Q8WTW3 Q8WTW3 911 922 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 0.003986 102.06 By MS/MS 4 0 1 1 454710 454710 0 4403 2010 4574 10623 7566 7566 1318 1 12413 0 FGLYLPK GYRLATATFAGIENKFGLYLPKFKSPSVAV TFAGIENKFGLYLPKFKSPSVAVVQPKAAV K F G P K F 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 0 0 0 1 0 0 0 7 0 836.47963 O75746 O75746 653 659 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.037342 109.88 By MS/MS 5 0 1 1 825500 825500 0 4404 327 4575 10624 7567 7567 1 33931 0 FGMFEFLSNHMR LSSLLYGSIPKAAVRFGMFEFLSNHMRDAQ AVRFGMFEFLSNHMRDAQGRLDSTRGLLCG R F G M R D 0 1 1 0 0 0 1 1 1 0 1 0 2 3 0 1 0 0 0 0 0 0 12 0 1514.6799 P53007 P53007 102 113 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.0011898 111.27 By MS/MS 8 0 1 1 1349700 1349700 0 4405 996 4576 10625 7568 7568 751;752 1 89037 0 FGNEVIPVTVTVK INSYTRSKAAWEAGKFGNEVIPVTVTVKGQ GKFGNEVIPVTVTVKGQPDVVVKEDEEYKR K F G V K G 0 0 1 0 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 4 0 0 13 0 1401.7868 P24752 P24752 231 243 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0036511 126.1 By MS/MS By matching 7.33 0.471 2 1 2 1 28514000 28455000 58454 4406 680 4577 10626;10627;10628 7569;7570 7570 2 548300 239960 FGNICVVR TASLLDYDTVAGADKFGNICVVRLPPNTND TVAGADKFGNICVVRLPPNTNDEVDEDPTG K F G V R L 0 1 1 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 8 0 963.49602 Q15393 Q15393 1050 1057 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.0056149 138.24 By MS/MS 2 0.816 1 1 1 3 582490 582490 0 4407 1498 4578 10629;10630;10631 7571 7571 1 24657 0 FGPALSVK GEDMDDERLKDLFGKFGPALSVKVMTDESG LKDLFGKFGPALSVKVMTDESGKSKGFGFV K F G V K V 1 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 8 0 817.46979 P11940;Q9H361 P11940 214 221 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.018685 108.46 By MS/MS 3 1.41 1 1 1 1 1 5 4462000 4462000 0 4408 560 4579 10632;10633;10634;10635;10636 7572 7572 1 176830 0 FGPLTPELMVPR SKIIPALQSRCTRFRFGPLTPELMVPRLEH RFRFGPLTPELMVPRLEHVVEEEKVDISED R F G P R L 0 1 0 0 0 0 1 1 0 0 2 0 1 1 3 0 1 0 0 1 0 0 12 0 1355.7271 P40937 P40937 174 185 RFC5 Replication factor C subunit 5 yes yes 2 0.020186 80.706 By MS/MS 7.5 0.5 1 1 2 4028300 4028300 0 4409 833 4580 10637;10638 7573;7574 7573 581 2 179520 0 FGPVVAPKPK SVSVSAPAFYAPQKKFGPVVAPKPKVNPFR APQKKFGPVVAPKPKVNPFRPGDSEPPPAP K F G P K V 1 0 0 0 0 0 0 1 0 0 0 2 0 1 3 0 0 0 0 2 0 0 10 1 1038.6226 Q15942 Q15942 26 35 ZYX Zyxin yes yes 3 0.001837 111.74 By MS/MS 5 0 1 1 524460 524460 0 4410 1528 4581 10639 7575 7575 1 21557 0 FGPYYTEPVIAGLDPK YTLMSMVANLLYEKRFGPYYTEPVIAGLDP GPYYTEPVIAGLDPKTFKPFICSLDLIGCP R F G P K T 1 0 0 1 0 0 1 2 0 1 1 1 0 1 3 0 1 0 2 1 0 0 16 0 1765.8927 P49720 P49720 100 115 PSMB3 Proteasome subunit beta type-3 yes yes 2 5.4881E-21 224.42 By MS/MS 9 0 1 1 1671700 1671700 0 4411 926 4582 10640 7576 7576 1 959400 0 FGQDHAR QRIKIEANWDLFYYRFGQDHARSNLIWNFK NWDLFYYRFGQDHARSNLIWNFKTREELKD R F G A R S 1 1 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 7 0 829.3831 O75165 O75165 765 771 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.05115 104.75 By MS/MS 2 0 1 1 0 0 0 4412 287 4583 10641 7577 7577 1 0 0 FGQDIISPLLSVK NSTGEPVWKVLIYDRFGQDIISPLLSVKEL DRFGQDIISPLLSVKELRDMGITLHLLLHS R F G V K E 0 0 0 1 0 1 0 1 0 2 2 1 0 1 1 2 0 0 0 1 0 0 13 0 1415.8024 Q8WVM8 Q8WVM8 51 63 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 2.1671E-07 177.1 By MS/MS 5 0 1 1 282760 282760 0 4413 2033 4584 10642 7578 7578 1 11623 0 FGQGGAGPVGGQGPR TMSGSMMGSDMRTERFGQGGAGPVGGQGPR FGQGGAGPVGGQGPRGMGPGTPAGYGRGRE R F G P R G 1 1 0 0 0 2 0 7 0 0 0 0 0 1 2 0 0 0 0 1 0 0 15 0 1340.6585 P23246 P23246 667 681 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 1.7268E-05 140.78 By MS/MS By matching 4 0 2 1 1 3298600 3262500 36168 4414 665 4585 10643;10644 7579 7579 1 89061 75576 FGQLTYVR SHPFVGLAFKLEVGRFGQLTYVRSYQGELK FKLEVGRFGQLTYVRSYQGELKKGDTIYNT R F G V R S 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 1 1 0 0 8 0 982.52362 Q96RP9 Q96RP9 365 372 GFM1 Elongation factor G, mitochondrial yes yes 2 0.00079654 176.09 By MS/MS 4.6 2.06 1 1 1 1 1 5 20453000 20453000 0 4415 2247 4586 10645;10646;10647;10648;10649 7580;7581;7582;7583 7582 4 633550 0 FGQMLGSNMTEFHSQISK VNLKYDSWHKEVLSKFGQMLGSNMTEFHSQ MLGSNMTEFHSQISKSRQELEQHSVDTAST K F G S K S 0 0 1 0 0 2 1 2 1 1 1 1 2 2 0 3 1 0 0 0 0 0 18 0 2040.9397 Q14204 Q14204 1131 1148 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.049661 46.621 By MS/MS 1 0 1 1 454620 454620 0 4416 1421 4587 10650 7584 7584 1 22212 0 FGQVPDQPAGLR GPTFSSTPYRYQACRFGQVPDQPAGLRLFT ACRFGQVPDQPAGLRLFTVQIPHKRLRQPP R F G L R L 1 1 0 1 0 2 0 2 0 0 1 0 0 1 2 0 0 0 0 1 0 0 12 0 1283.6622 Q9HCU5 Q9HCU5 252 263 PREB Prolactin regulatory element-binding protein yes yes 2 0.013097 93.561 By MS/MS By matching 7.33 0.471 2 1 2 1 5017300 4997600 19772 4417 2565 4588 10651;10652;10653 7585 7585 1 103140 81169 FGQVYTEAK PVLLNCLMYKMCYYRFGQVYTEAKRPPGFD KMCYYRFGQVYTEAKRPPGFDRVRNAEIGN R F G A K R 1 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 1 1 0 0 9 0 1041.5131 P46977 P46977 647 655 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00036669 156.35 By MS/MS 3 1.41 1 1 1 1 1 5 6308600 6308600 0 4418 893 4589 10654;10655;10656;10657;10658 7586;7587 7586 2 272720 0 FGSFEIFK EQCTVVLRVASTFIRFGSFEIFKSADEHTG VASTFIRFGSFEIFKSADEHTGRAGPSVGR R F G F K S 0 0 0 0 0 0 1 1 0 1 0 1 0 3 0 1 0 0 0 0 0 0 8 0 973.49092 Q9BVL4 Q9BVL4 254 261 SELO Selenoprotein O yes yes 2 0.0030754 149.4 By MS/MS 5 0 1 1 323080 323080 0 4419 2380 4590 10659 7588 7588 1 13280 0 FGSNINLEADES IQRVLADLKVQLYAKFGSNINLEADES___ YAKFGSNINLEADES_______________ K F G E S - 1 0 2 1 0 0 2 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1294.5677 Q9NQP4 Q9NQP4 123 134 PFDN4 Prefoldin subunit 4 yes yes 2 2.9537E-09 195.51 By MS/MS 10 0 1 1 443440 443440 0 4420 2591 4591 10660 7589 7589 1 471330 0 FGTDLNQGEK EYALKQERAKYHKLKFGTDLNQGEKKADVS YHKLKFGTDLNQGEKKADVSEQVSNGPVES K F G E K K 0 0 1 1 0 1 1 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1107.5197 Q9NRL3 Q9NRL3 137 146 STRN4 Striatin-4 yes yes 2 0.01252 97.565 By MS/MS 4.5 0.5 1 1 2 780130 780130 0 4421 2607 4592 10661;10662 7590 7590 1 24487 0 FGVEQDVDMVFASFIR VDLPAVSEKDIQDLKFGVEQDVDMVFASFI GVEQDVDMVFASFIRKASDVHEVRKVLGEK K F G I R K 1 1 0 2 0 1 1 1 0 1 0 0 1 3 0 1 0 0 0 3 0 0 16 0 1858.8924 P14618 P14618 231 246 PKM Pyruvate kinase PKM yes yes 2 3.3458E-06 148.72 By MS/MS 6 0 1 1 144900 144900 0 4422 588 4593 10663 7591;7592 7592 377 2 1129.9 0 FGVEQPEGDEDLTK KGKNICEGGEEMDNKFGVEQPEGDEDLTKE KFGVEQPEGDEDLTKEKGHGGCGRYQPRIR K F G T K E 0 0 0 2 0 1 3 2 0 0 1 1 0 1 1 0 1 0 0 1 0 0 14 0 1562.71 P24928 P24928 164 177 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0027985 113.38 By MS/MS 2.5 0.5 1 1 2 297540 297540 0 4423 681 4594 10664;10665 7593 7593 1 12146 0 FGVTSGSSELEK GQTLMINQLIDMEWKFGVTSGSSELEKVGS EWKFGVTSGSSELEKVGSIFLQLKLVVKKG K F G E K V 0 0 0 0 0 0 2 2 0 0 1 1 0 1 0 3 1 0 0 1 0 0 12 0 1239.5983 Q86VX2 Q86VX2 141 152 COMMD7 COMM domain-containing protein 7 yes yes 2 0.0016704 125.68 By MS/MS 9 0 1 1 360870 360870 0 4424 1833 4595 10666 7594 7594 1 207110 0 FGVVLDEIKPSSAPELQAVR ERDVFLYRAYLAQRKFGVVLDEIKPSSAPE DEIKPSSAPELQAVRMFADYLAHESRRDSI K F G V R M 2 1 0 1 0 1 2 1 0 1 2 1 0 1 2 2 0 0 0 3 0 0 20 1 2154.1685 O14579 O14579 66 85 COPE Coatomer subunit epsilon yes yes 3 0.0012177 85.937 By MS/MS 8 0 1 1 789970 789970 0 4425 115 4596 10667 7595 7595 1 52114 0 FHEICSNLVK RIFGSNKWTTEQQQRFHEICSNLVKTRRRA EQQQRFHEICSNLVKTRRRAVGWWKRLFTL R F H V K T 0 0 1 0 1 0 1 0 1 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1245.6176 Q15041 Q15041 105 114 ARL6IP1 ADP-ribosylation factor-like protein 6-interacting protein 1 yes yes 2 0.00042909 155.84 By MS/MS 9 0 1 1 1686000 1686000 0 4426 1468 4597 10668 7596 7596 1 967610 0 FHINQPALK PQDLDSAIMRRMPTRFHINQPALKQREAIL RRMPTRFHINQPALKQREAILKLILKNENV R F H L K Q 1 0 1 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 9 0 1066.5924 Q8NBU5 Q8NBU5 255 263 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 0.033031 89.369 By MS/MS 7.5 0.5 1 1 2 1383200 1383200 0 4427 1947 4598 10669;10670 7597 7597 1 48698 0 FHPEPYGLEDDQR QPQVRVGGSSVDLHRFHPEPYGLEDDQRSM HRFHPEPYGLEDDQRSMGYDDLDYGMMSDY R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 O60716 O60716 275 287 CTNND1 Catenin delta-1 yes yes 3 0.0092974 98.407 By MS/MS 4.5 0.5 1 1 2 2417900 2417900 0 4428 260 4599 10671;10672 7598;7599 7598 2 68600 0 FHVEEEGKGK ANPAAGSVILLENLRFHVEEEGKGKDASGN LENLRFHVEEEGKGKDASGNKVKAEPAKIE R F H G K D 0 0 0 0 0 0 3 2 1 0 0 2 0 1 0 0 0 0 0 1 0 0 10 1 1158.5669 P00558 P00558 124 133 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.0015461 156.35 By MS/MS 7 0 1 1 856500 856500 0 4429 432 4600 10673 7600;7601 7600 2 15306 0 FHVEEEGKGKDASGNK ANPAAGSVILLENLRFHVEEEGKGKDASGN HVEEEGKGKDASGNKVKAEPAKIEAFRASL R F H N K V 1 0 1 1 0 0 3 3 1 0 0 3 0 1 0 1 0 0 0 1 0 0 16 2 1730.8224 P00558 P00558 124 139 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.027684 73.834 By MS/MS 7 0 1 1 0 0 0 4430 432 4601 10674 7602 7602 1 0 0 FIAAVIER DDDSHEDRGIISNTRFIAAVIERHAHSPER GIISNTRFIAAVIERHAHSPERRRRYWGRS R F I E R H 2 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 8 0 917.53345 Q5VU97 Q5VU97 1167 1174 CACHD1 VWFA and cache domain-containing protein 1 yes yes 2 0.018685 108.46 By MS/MS 3 0 1 1 625040 625040 0 4431 1650 4602 10675 7603 7603 1 16317 0 FIADQLDHLNVTK EAIKAAATSKFPPHRFIADQLDHLNVTKKW HRFIADQLDHLNVTKKWS____________ R F I T K K 1 0 1 2 0 1 0 0 1 1 2 1 0 1 0 0 1 0 0 1 0 0 13 0 1512.7936 Q9BQC6 Q9BQC6 87 99 MRPL57 Ribosomal protein 63, mitochondrial yes yes 2 0.00094219 144.28 By MS/MS 10 0 1 1 408110 408110 0 4432 2313 4603 10676 7604 7604 1 433780 0 FIAGTGCLVR VGTNMDNRLPLENGRFIAGTGCLVRAVEMA LENGRFIAGTGCLVRAVEMAAQRQADIIGK R F I V R A 1 1 0 0 1 0 0 2 0 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1092.575 A6NDG6 A6NDG6 211 220 PGP Phosphoglycolate phosphatase yes yes 2 0.00039733 148.99 By MS/MS 8 0 1 1 1588600 1588600 0 4433 20 4604 10677 7605 7605 1 104800 0 FICDASSLHQVR DVKETEDEEERNVFKFICDASSLHQVRKKL VFKFICDASSLHQVRKKLDSLGLCSVSCAL K F I V R K 1 1 0 1 1 1 0 0 1 1 1 0 0 1 0 2 0 0 0 1 0 0 12 0 1431.6929 Q9BSH4 Q9BSH4 232 243 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2;3 0.00033946 146.11 By MS/MS 8.33 0.471 2 1 3 7602600 7602600 0 4434 2337 4605 10678;10679;10680 7606;7607 7607 2 583840 0 FICISDLR ETGYTYILPKNVLKKFICISDLRAQIAGYL PKNVLKKFICISDLRAQIAGYLYGVSPPDN K F I L R A 0 1 0 1 1 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 8 0 1022.5219 Q6P2Q9 Q6P2Q9 2114 2121 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0084907 124.08 By MS/MS 1.5 0.5 1 1 2 596920 596920 0 4435 1706 4606 10681;10682 7608;7609 7608 2 29500 0 FICTTSAIQNR AKAISEQTGKELLYKFICTTSAIQNRFKYA LLYKFICTTSAIQNRFKYARVTPDTDWARL K F I N R F 1 1 1 0 1 1 0 0 0 2 0 0 0 1 0 1 2 0 0 0 0 0 11 0 1309.6449 P53396 P53396 18 28 ACLY ATP-citrate synthase yes yes 2 3.1724E-29 257.27 By MS/MS 5.36 2.77 1 1 1 2 1 1 1 1 1 1 11 47535000 47535000 0 4436 1001 4607 10683;10684;10685;10686;10687;10688;10689;10690;10691;10692;10693 7610;7611;7612;7613;7614;7615;7616 7613 7 1699800 0 FIDIAAAK DNFQNEEEKKKAEKKFIDIAAAKEVLSDPE KKKAEKKFIDIAAAKEVLSDPEMRKKFDDG K F I A K E 3 0 0 1 0 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 8 0 847.48035 Q13217 Q13217 439 446 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 2 0.021852 104.37 By MS/MS 7 0.816 1 1 1 3 2314200 2314200 0 4437 1348 4608 10694;10695;10696 7617 7617 1 35076 0 FIDTSQFILNR LDSRAEACFVNCVERFIDTSQFILNRLEQT CVERFIDTSQFILNRLEQTQKSKPVFSESL R F I N R L 0 1 1 1 0 1 0 0 0 2 1 0 0 2 0 1 1 0 0 0 0 0 11 0 1352.7089 O60220 O60220 70 80 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 2 5.1196E-05 195.79 By MS/MS 10 0 1 1 170530 170530 0 4438 236 4609 10697 7618 7618 1 181250 0 FIDTTLAITSR LDSRTENCLSSCVDRFIDTTLAITSRFAQI CVDRFIDTTLAITSRFAQIVQKGGQ_____ R F I S R F 1 1 0 1 0 0 0 0 0 2 1 0 0 1 0 1 3 0 0 0 0 0 11 0 1236.6714 Q9Y5J9 Q9Y5J9 63 73 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 1.9872E-07 192.1 By MS/MS 10 0 1 1 608550 608550 0 4439 2970 4610 10698 7619 7619 1 646820 0 FIEDELQIPVK RAFKELPVNAQNYVRFIEDELQIPVKWIGV NYVRFIEDELQIPVKWIGVGKSRESMIQLF R F I V K W 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 0 0 0 0 1 0 0 11 0 1329.718 P30520 P30520 431 441 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 0.00010857 160.53 By MS/MS 6.5 0.5 1 1 2 5876100 5876100 0 4440 742 4611 10699;10700 7620 7620 1 93713 0 FIEIAAR KLNTLLQRAPQCLGKFIEIAARKKRNFILD RAPQCLGKFIEIAARKKRNFILDQTNVSAA K F I A R K 2 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 7 0 818.46504 Q00839 Q00839 566 572 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.043839 105.39 By MS/MS By matching 4.33 0.471 2 1 2 1 2228300 2184000 44289 4441 1238 4612 10701;10702;10703 7621 7621 1 62091 92544 FIESAHTELAKDDAAPAPPVADAK PVQEEEYVAEKLPSRFIESAHTELAKDDAA AKDDAAPAPPVADAKAQDRGVEGELGNEES R F I A K A 7 0 0 3 0 0 2 0 1 1 1 2 0 1 3 1 1 0 0 1 0 0 24 1 2463.2282 Q92667 Q92667 271 294 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 3 0.0019909 68.303 By MS/MS 3 0 1 1 968520 968520 0 4442 2074 4613 10704 7622 7622 1 25283 0 FIGELFK EARDIARRRSLGNIKFIGELFKLKMLTEAI RRSLGNIKFIGELFKLKMLTEAIMHDCVVK K F I F K L 0 0 0 0 0 0 1 1 0 1 1 1 0 2 0 0 0 0 0 0 0 0 7 0 852.47454 Q04637;O43432 Q04637 901 907 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.040889 107.43 By MS/MS 3 1.41 1 1 1 1 1 5 7128200 7128200 0 4443 1264;200 4614 10705;10706;10707;10708;10709 7623;7624 7624 2 267560 0 FIGPSPEVVR ERADFAQACQDAGVRFIGPSPEVVRKMGDK DAGVRFIGPSPEVVRKMGDKVEARAIAIAA R F I V R K 0 1 0 0 0 0 1 1 0 1 0 0 0 1 2 1 0 0 0 2 0 0 10 0 1099.6026 P11498 P11498 138 147 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.041208 82.287 By MS/MS By matching 4.33 0.471 2 1 2 1 6739300 6705500 33847 4444 555 4615 10710;10711;10712 7625 7625 1 187320 70725 FIGSPPGYVGHEEGGQLTK RLDMSEFQERHEVAKFIGSPPGYVGHEEGG PPGYVGHEEGGQLTKKLKQCPNAVVLFDEV K F I T K K 0 0 0 0 0 1 2 5 1 1 1 1 0 1 2 1 1 0 1 1 0 0 19 0 1971.969 Q9H078 Q9H078 423 441 CLPB Caseinolytic peptidase B protein homolog yes yes 2 3.6827E-11 160.87 By MS/MS 6.5 0.5 1 1 2 9593600 9593600 0 4445 2448 4616 10713;10714 7626 7626 1 76198 0 FIHDQTSPNPK EAVVVVCPMETIKVKFIHDQTSPNPKYRGF IKVKFIHDQTSPNPKYRGFFHGVREIVREQ K F I P K Y 0 0 1 1 0 1 0 0 1 1 0 1 0 1 2 1 1 0 0 0 0 0 11 0 1282.6306 P53007 P53007 150 160 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2;3 7.1924E-05 166.07 By MS/MS By matching 8.5 0.707 5 2 1 6 2 38052000 37943000 109110 4446 996 4617 10715;10716;10717;10718;10719;10720;10721;10722 7627;7628;7629;7630 7629 4 2824500 930850 FIINSYPK RSFLLAKKSGENVAKFIINSYPKYFQKDIA SGENVAKFIINSYPKYFQKDIAEPHIPCLM K F I P K Y 0 0 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 0 8 0 980.53312 Q96EY7 Q96EY7 119 126 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.014856 113.41 By MS/MS 5 0 1 1 5677600 5677600 0 4447 2170 4618 10723 7631 7631 1 233370 0 FIIPQIVK ESRLNLVQRNVNVFKFIIPQIVKYSPDCII RNVNVFKFIIPQIVKYSPDCIIIVVSNPVD K F I V K Y 0 0 0 0 0 1 0 0 0 3 0 1 0 1 1 0 0 0 0 1 0 0 8 0 956.60589 P07195 P07195 120 127 LDHB L-lactate dehydrogenase B chain yes yes 2 0.035414 97.071 By MS/MS 8.5 1.12 1 1 1 1 4 3536600 3536600 0 4448 486 4619 10724;10725;10726;10727 7632 7632 1 297320 0 FILNALGEK QSCRHFCNKIWNALRFILNALGEKFVPQPA IWNALRFILNALGEKFVPQPAEELSPSSPM R F I E K F 1 0 1 0 0 0 1 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1003.5702 Q5ST30 Q5ST30 755 763 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.00079651 146.69 By MS/MS 3.5 0.5 1 1 2 1639400 1639400 0 4449 1619 4620 10728;10729 7633 7633 1 44715 0 FIMGDSSVQDQWK DQLRFSYLAVIEGAKFIMGDSSVQDQWKEL AKFIMGDSSVQDQWKELSHEDLEPPPEHIP K F I W K E 0 0 0 2 0 2 0 1 0 1 0 1 1 1 0 2 0 1 0 1 0 0 13 0 1539.7028 P18031 P18031 280 292 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 4.7691E-08 191.53 By MS/MS 6 0 1 1 3047000 3047000 0 4450 620 4621 10730 7634 7634 1 23761 0 FINDCTELFR ASTVVFSDTVVVSEKFINDCTELFRELMHQ VVSEKFINDCTELFRELMHQKAEKEMKNNP K F I F R E 0 1 1 1 1 0 1 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 10 0 1313.6074 O94874 O94874 368 377 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.00012653 162.64 By MS/MS 4.5 0.5 1 1 2 5912200 5912200 0 4451 354 4622 10731;10732 7635;7636 7636 2 235130 0 FINNNAVTK NDAGFVAALDKACGRFINNNAVTKMAQSSS DKACGRFINNNAVTKMAQSSSKSPELLARY R F I T K M 1 0 3 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 9 0 1019.54 Q13616 Q13616 402 410 CUL1 Cullin-1 yes yes 2 0.0026948 122.33 By MS/MS 4 2 1 1 1 1 1 1 1 7 5627000 5627000 0 4452 1387 4623 10733;10734;10735;10736;10737;10738;10739 7637;7638 7638 2 164420 0 FIPGLQMLSDAAPGK NADVAELLVVEKDTRFIPGLQMLSDAAPGK FIPGLQMLSDAAPGKLRIVHGDVLTFKVEK R F I G K L 2 0 0 1 0 1 0 2 0 1 2 1 1 1 2 1 0 0 0 0 0 0 15 0 1543.8068 Q8WVM0 Q8WVM0 90 104 TFB1M Dimethyladenosine transferase 1, mitochondrial yes yes 2 0.0018962 112.5 By MS/MS 7.5 0.5 1 1 2 1037200 1037200 0 4453 2032 4624 10740;10741 7639 7639 1325 1 30895 0 FIPLSEPAPVPPIPNEQQLAR PRKPVAGALDVSFNKFIPLSEPAPVPPIPN PAPVPPIPNEQQLARLTDYVAFLEN_____ K F I A R L 2 1 1 0 0 2 2 0 0 2 2 0 0 1 6 1 0 0 0 1 0 0 21 0 2312.2529 Q99627 Q99627 179 199 COPS8 COP9 signalosome complex subunit 8 yes yes 2 0.015883 63.709 By MS/MS 9 0 1 1 252040 252040 0 4454 2278 4625 10742 7640 7640 1 144650 0 FIQPNIGELPTALK KEGLDEVAGIINDAKFIQPNIGELPTALKG KFIQPNIGELPTALKGRLNDSNKILVQQTL K F I L K G 1 0 1 0 0 1 1 1 0 2 2 1 0 1 2 0 1 0 0 0 0 0 14 0 1539.8661 Q14008 Q14008 893 906 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00031062 136.5 By MS/MS 2.5 0.5 1 1 2 1155100 1155100 0 4455 1405 4626 10743;10744 7641;7642 7641 2 46289 0 FISVGYVDDTQFVR YFDTAVSRPGRGEPRFISVGYVDDTQFVRF RFISVGYVDDTQFVRFDSDAASPRGEPRAP R F I V R F 0 1 0 2 0 1 0 1 0 1 0 0 0 2 0 1 1 0 1 3 0 0 14 0 1644.8148 P01889;P10321;P01893;P13747 P10321 46 59 HLA-B;HLA-C;HLA-H;HLA-E HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, alpha chain E no no 2 2.7101E-08 190.26 By MS/MS 7 0 1 1 923460 923460 0 4456 536;436 4627 10745 7643 7643 1 16502 0 FITDNTVEER RAHRIGQTKTVRVFRFITDNTVEERIVERA VRVFRFITDNTVEERIVERAEMKLRLDSIV R F I E R I 0 1 1 1 0 0 2 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1222.583 O60264 O60264 607 616 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.00046947 152.54 By MS/MS 2.5 1.12 1 1 1 1 4 6941400 6941400 0 4457 240 4628 10746;10747;10748;10749 7644;7645 7644 2 192330 0 FITLIDNFYDLK NIPQFTLANRTQGRRFITLIDNFYDLKVRI GRRFITLIDNFYDLKVRIICSASTPISSLF R F I L K V 0 0 1 2 0 0 0 0 0 2 2 1 0 2 0 0 1 0 1 0 0 0 12 0 1500.7864 Q8WV93 Q8WV93 390 401 LACE1 Lactation elevated protein 1 yes yes 2 8.21E-24 251.43 By MS/MS 6 0 1 1 409580 409580 0 4458 2026 4629 10750 7646 7646 1 3193.9 0 FITLLADTSDSR AASSSVCKLDGLIHRFITLLADTSDSRALE IHRFITLLADTSDSRALENRGADASMACRK R F I S R A 1 1 0 2 0 0 0 0 0 1 2 0 0 1 0 2 2 0 0 0 0 0 12 0 1337.6827 Q8N201 Q8N201 1842 1853 INTS1 Integrator complex subunit 1 yes yes 2 0.0017754 152.69 By MS/MS 2 0 1 1 128380 128380 0 4459 1903 4630 10751 7647 7647 1 6381.2 0 FIVDLTVQEK NFTLADILLYYGLHRFIVDLTVQEKEKYLN YGLHRFIVDLTVQEKEKYLNVSRWFCHIQH R F I E K E 0 0 0 1 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1190.6547 O43324 O43324 127 136 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 1.0409E-06 182.39 By MS/MS 9.5 0.5 1 1 2 1358600 1358600 0 4460 194 4631 10752;10753 7648 7648 1 807350 0 FIVNTLKDGR EEEQLSSNCVCQIHRFIVNTLKDGRRVVIL CQIHRFIVNTLKDGRRVVILMELEVLKSAE R F I G R R 0 1 1 1 0 0 0 1 0 1 1 1 0 1 0 0 1 0 0 1 0 0 10 1 1161.6506 P27694 P27694 82 91 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.036054 109.44 By MS/MS 5 0 1 1 307010 307010 0 4461 708 4632 10754 7649 7649 0 12620 0 FKASGVEGADVVK QSKIDEAILITWTKRFKASGVEGADVVKLL KRFKASGVEGADVVKLLNKAIKKRGDYDAN R F K V K L 2 0 0 1 0 0 1 2 0 0 0 2 0 1 0 1 0 0 0 3 0 0 13 1 1305.6929 P19367 P19367 175 187 HK1 Hexokinase-1 yes yes 2;3 0.0081481 130.1 By MS/MS 4 0 2 2 2188400 2188400 0 4462 630 4633 10755;10756 7650;7651 7650 2 59741 0 FKEPLPEYVR KATRRRLAVLPYELRFKEPLPEYVRLVTEF PYELRFKEPLPEYVRLVTEFSKKTGDYPSL R F K V R L 0 1 0 0 0 0 2 0 0 0 1 1 0 1 2 0 0 0 1 1 0 0 10 1 1276.6816 Q9ULX3 Q9ULX3 55 64 NOB1 RNA-binding protein NOB1 yes yes 3 0.050818 57.149 By MS/MS 7 0 1 1 980220 980220 0 4463 2829 4634 10757 7652 7652 1 17517 0 FKEQEQDDSTVACR HLHKCRECRLERYRKFKEQEQDDSTVACRF KFKEQEQDDSTVACRFFHFRRLIFTRKGVL K F K C R F 1 1 0 2 1 2 2 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 14 1 1711.7472 Q7LBC6 Q7LBC6 925 938 KDM3B Lysine-specific demethylase 3B yes yes 3 0.056251 55.213 By MS/MS 2 0 1 1 141710 141710 0 4464 1772 4635 10758 7653 7653 1 7043.5 0 FKEQLTPSQIMSLEK AYRAEWQVYKEEISRFKEQLTPSQIMSLEK FKEQLTPSQIMSLEKEIMDKHLKRKAMTKK R F K E K E 0 0 0 0 0 2 2 0 0 1 2 2 1 1 1 2 1 0 0 0 0 0 15 1 1777.9284 Q00059 Q00059 117 131 TFAM Transcription factor A, mitochondrial yes yes 2;3 0.00014115 157.5 By MS/MS 9 0 2 2 2069500 2069500 0 4465 1229 4636 10759;10760 7654;7655 7655 999 2 1187700 0 FKESFAEMNR SSLSMDEKVELYRIKFKESFAEMNRGSNEW LYRIKFKESFAEMNRGSNEWKTVVGGAMFF K F K N R G 1 1 1 0 0 0 2 0 0 0 0 1 1 2 0 1 0 0 0 0 0 0 10 1 1257.5812 P13073 P13073 86 95 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 3 0.0041277 99.788 By MS/MS 10 0 1 1 554590 554590 0 4466 571 4637 10761 7656 7656 359 1 589480 0 FKEVGEAFTILSDPK HSGASAEVQKEEEKKFKEVGEAFTILSDPK FKEVGEAFTILSDPKKKTRYDSGQDLDEEG K F K P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 2 1 1 1 0 0 1 0 0 15 1 1679.877 Q99615 Q99615 428 442 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 3.4534E-07 175.29 By MS/MS 6.5 0.5 1 1 2 3059400 3059400 0 4467 2276 4638 10762;10763 7657 7657 1 25862 0 FKKYEEIDNAPEER TAAITKILAEGGGAKFKKYEEIDNAPEERA KFKKYEEIDNAPEERARGITINAAHVEYST K F K E R A 1 1 1 1 0 0 4 0 0 1 0 2 0 1 1 0 0 0 1 0 0 0 14 2 1766.8475 P49411 P49411 89 102 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 2.9066E-17 249.98 By MS/MS 7.71 1.28 1 3 1 1 1 7 110590000 110590000 0 4468 918 4639 10764;10765;10766;10767;10768;10769;10770 7658;7659;7660 7660 3 3350800 0 FKLITEDVQGK VSLADLQNDEVAFRKFKLITEDVQGKNCLT AFRKFKLITEDVQGKNCLTNFHGMDLTRDK K F K G K N 0 0 0 1 0 1 1 1 0 1 1 2 0 1 0 0 1 0 0 1 0 0 11 1 1276.7027 P61247 P61247 84 94 RPS3A 40S ribosomal protein S3a yes yes 2;3 4.5649E-06 184.71 By MS/MS By matching 8 0 3 2 1 3964000 3936000 27995 4469 1094 4640 10771;10772;10773 7661;7662 7661 2 259650 238830 FKNEDLTDELSLNK TIDSIMNKVRDIKNKFKNEDLTDELSLNKI KFKNEDLTDELSLNKISADTTDNSGTVNQI K F K N K I 0 0 2 2 0 0 2 0 0 0 3 2 0 1 0 1 1 0 0 0 0 0 14 1 1664.8257 P33981 P33981 27 40 TTK Dual specificity protein kinase TTK yes yes 2 0.001153 170.95 By MS/MS 4 0 1 1 542620 542620 0 4470 772 4641 10774 7663 7663 1 14813 0 FKPNSVTYR NLIQVRQGKVTRQGKFKPNSVTYRTKSGNI VTRQGKFKPNSVTYRTKSGNILLHKSTINR K F K Y R T 0 1 1 0 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 0 9 1 1110.5822 Q7L2E3 Q7L2E3 1041 1049 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 3 0.0099246 93.598 By MS/MS By matching 3.75 0.829 2 1 1 3 1 1271900 1252900 18992 4471 1763 4642 10775;10776;10777;10778 7664 7664 1 34200 27220 FKQISQAYEVLSDAK ALKYHPDKNPNEGEKFKQISQAYEVLSDAK FKQISQAYEVLSDAKKRELYDKGGEQAIKE K F K A K K 2 0 0 1 0 2 1 0 0 1 1 2 0 1 0 2 0 0 1 1 0 0 15 1 1725.8938 P31689 P31689 45 59 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 3.5119E-09 188.09 By MS/MS 6 0 2 2 11508000 11508000 0 4472 755 4643 10779;10780 7665;7666 7665 2 89740 0 FKTIEEVVGR IAKEEIFGPVMQILKFKTIEEVVGRANNST MQILKFKTIEEVVGRANNSTYGLAAAVFTK K F K G R A 0 1 0 0 0 0 2 1 0 1 0 1 0 1 0 0 1 0 0 2 0 0 10 1 1176.6503 P05091 P05091 427 436 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.0034786 146.11 By MS/MS 6 0 1 1 5791300 5791300 0 4473 467 4644 10781 7667 7667 1 45160 0 FLAEEGFYK VIHEFDPYFNYRTTRFLAEEGFYKFHNWFD NYRTTRFLAEEGFYKFHNWFDDRAWYPLGR R F L Y K F 1 0 0 0 0 0 2 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1102.5335 P46977 P46977 59 67 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.0010958 139.97 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 5695500 5695500 0 4474 893 4645 10782;10783;10784;10785;10786;10787 7668;7669 7668 2 203030 0 FLAVGLVDNTVR CMSLANVPPGEQRSRFLAVGLVDNTVRIIS RSRFLAVGLVDNTVRIISLDPSDCLQPLSM R F L V R I 1 1 1 1 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 3 0 0 12 0 1302.7296 Q15393 Q15393 604 615 SF3B3 Splicing factor 3B subunit 3 yes yes 2 3.6706E-07 184.71 By MS/MS 2.5 1.12 1 1 1 1 4 3514500 3514500 0 4475 1498 4646 10788;10789;10790;10791 7670;7671;7672;7673;7674 7672 5 112430 0 FLCIFLEK LNSIEFRECREEILKFLCIFLEKMGQKIAP CREEILKFLCIFLEKMGQKIAPYSVEIKNT K F L E K M 0 0 0 0 1 0 1 0 0 1 2 1 0 2 0 0 0 0 0 0 0 0 8 0 1068.5678 P78527 P78527 88 95 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.032287 93.262 By MS/MS 2 0.816 1 1 1 3 269990 269990 0 4476 1197 4647 10792;10793;10794 7675 7675 1 11476 0 FLDDLGNAK SLKHATRIIDEVVNKFLDDLGNAKSHLMSL DEVVNKFLDDLGNAKSHLMSLYSACSSEVP K F L A K S 1 0 1 2 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 9 0 991.49746 O95816 O95816 124 132 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 0.003615 118.74 By MS/MS 8.5 0.5 1 1 2 923030 923030 0 4477 408 4648 10795;10796 7676 7676 1 380790 0 FLDELDAVQMD LVSEAIKVLMGKCRRFLDELDAVQMD____ KCRRFLDELDAVQMD_______________ R F L M D - 1 0 0 3 0 1 1 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 11 0 1294.5751 O15160 O15160 336 346 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.00016754 153.12 By MS/MS 7 0 1 1 497390 497390 0 4478 155 4649 10797 7677 7677 97 1 8888.4 0 FLDELEDEAK LAIYGYTFYSISQERFLDELEDEAKAARAR ISQERFLDELEDEAKAARARALARASGS__ R F L A K A 1 0 0 2 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 10 0 1207.5608 Q9Y2R0 Q9Y2R0 84 93 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 1.4382E-10 203.29 By MS/MS 10 0 1 1 14925000 14925000 0 4479 2897 4650 10798 7678 7678 1 15863000 0 FLDGIYVSEK LIQQATTVKNKDIRKFLDGIYVSEKGTVQQ KDIRKFLDGIYVSEKGTVQQADE_______ K F L E K G 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 1 0 0 10 0 1169.5968 P32969 P32969 175 184 RPL9 60S ribosomal protein L9 yes yes 2 0.00075438 134.25 By MS/MS 9 0 1 1 2785400 2785400 0 4480 765 4651 10799 7679 7679 1 1598600 0 FLDQNLQK RLARDANSENCNKNKFLDQNLQKYQAECSQ ENCNKNKFLDQNLQKYQAECSQFKAKLASL K F L Q K Y 0 0 1 1 0 2 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5291 P15924 P15924 1057 1064 DSP Desmoplakin yes yes 2 0.014788 113.5 By MS/MS 2 0 1 1 815250 815250 0 4481 603 4652 10800 7680 7680 1 40522 0 FLDSGPNK AIVNTARSMVSTIMKFLDSGPNKAVDSTLK MVSTIMKFLDSGPNKAVDSTLKTRILASEP K F L N K A 0 0 1 1 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 0 8 0 876.43413 Q9NR09 Q9NR09 3132 3139 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.048699 91.853 By MS/MS 1.5 0.5 1 1 2 260900 260900 0 4482 2596 4653 10801;10802 7681 7681 1 12837 0 FLEEEVYPLLKPYESVMK DPSSFTGRASQQVQRFLEEEVYPLLKPYES EEVYPLLKPYESVMKVKAELCL________ R F L M K V 0 0 0 0 0 0 4 0 0 0 3 2 1 1 2 1 0 0 2 2 0 0 18 1 2213.133 P30566 P30566 460 477 ADSL Adenylosuccinate lyase yes yes 3 0.0093559 74.786 By MS/MS 6 0 1 1 512090 512090 0 4483 744 4654 10803 7682 7682 1 3993.3 0 FLEEFITPIVK INFIHHNWPSLLRHRFLEEFITPIVKVSKN LRHRFLEEFITPIVKVSKNKQEMAFYSLPE R F L V K V 0 0 0 0 0 0 2 0 0 2 1 1 0 2 1 0 1 0 0 1 0 0 11 0 1334.7486 P11388 P11388 569 579 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00041427 146.23 By MS/MS 3.5 0.5 1 1 2 487220 487220 0 4484 553 4655 10804;10805 7683;7684 7683 2 12795 0 FLEEYLSSTPQR ______________________________ ISRFLEEYLSSTPQRLKLLDAYLLYILLTG R F L Q R L 0 1 0 0 0 1 2 0 0 0 2 0 0 1 1 2 1 0 1 0 0 0 12 0 1468.7198 P61803 P61803 12 23 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 2 4.7088E-07 181.62 By MS/MS By matching 7 4.24 1 2 2 1 3015500 2985000 30435 4485 1106 4656 10806;10807;10808 7685;7686 7686 2 2783400 780650 FLELLPVSK VCLRFLPVFDIVIHRFLELLPVSKSLETLL DIVIHRFLELLPVSKSLETLLDHLGGLYKF R F L S K S 0 0 0 0 0 0 1 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 9 0 1044.6219 Q9ULK4 Q9ULK4 974 982 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 2 0.018767 97.431 By MS/MS 3 0 1 1 195700 195700 0 4486 2824 4657 10809 7687 7687 1 5108.9 0 FLELVQLK AYAENIALLAETALRFLELVQLKNLNMEND LAETALRFLELVQLKNLNMENDPNNEEIDE R F L L K N 0 0 0 0 0 1 1 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 8 0 988.59572 Q99570 Q99570 496 503 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 2 0.020922 105.57 By MS/MS 3.5 0.5 1 1 2 421030 421030 0 4487 2273 4658 10810;10811 7688 7688 1 11088 0 FLENALAVSTK GLVLHGVMEYDLSLRFLENALAVSTKYHGP LSLRFLENALAVSTKYHGPKALKVALSHHL R F L T K Y 2 0 1 0 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 1 0 0 11 0 1191.6499 O75153 O75153 1126 1136 CLUH Clustered mitochondria protein homolog yes yes 2 9.7128E-05 162.26 By MS/MS 3 0 1 1 810190 810190 0 4488 285 4659 10812 7689 7689 1 21150 0 FLENCLDTDLR TDWTAPIGHILPLRRFLENCLDTDLRSFYA PLRRFLENCLDTDLRSFYAESCFLFALTRQ R F L L R S 0 1 1 2 1 0 1 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 11 0 1394.65 Q8IWF2 Q8IWF2 584 594 FOXRED2 FAD-dependent oxidoreductase domain-containing protein 2 yes yes 2 2.8663E-05 172.61 By MS/MS 5 0 1 1 1984400 1984400 0 4489 1865 4660 10813 7690 7690 1 81567 0 FLENPDLSQTEEK EPEELQRRARHLEKKFLENPDLSQTEEKLR KKFLENPDLSQTEEKLRGAVLHALRKTTYH K F L E K L 0 0 1 1 0 1 3 0 0 0 2 1 0 1 1 1 1 0 0 0 0 0 13 0 1548.7308 Q9H7H0 Q9H7H0 117 129 METTL17 Methyltransferase-like protein 17, mitochondrial yes yes 2 1.251E-58 290.28 By MS/MS 7 0 1 1 1088500 1088500 0 4490 2517 4661 10814 7691 7691 1 19452 0 FLENPDLSQTEEKLR EPEELQRRARHLEKKFLENPDLSQTEEKLR FLENPDLSQTEEKLRGAVLHALRKTTYHWQ K F L L R G 0 1 1 1 0 1 3 0 0 0 3 1 0 1 1 1 1 0 0 0 0 0 15 1 1817.9159 Q9H7H0 Q9H7H0 117 131 METTL17 Methyltransferase-like protein 17, mitochondrial yes yes 3 0.043732 58.723 By MS/MS 7 0 1 1 2581300 2581300 0 4491 2517 4662 10815 7692 7692 1 46129 0 FLENVAAAETEK PSADTSSERSIYKARFLENVAAAETEKQVA KARFLENVAAAETEKQVALAQGRAETLAGA R F L E K Q 3 0 1 0 0 0 3 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 12 0 1320.6561 Q9Y613 Q9Y613 443 454 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 7.4455E-17 227.37 By MS/MS 3 0 1 1 1352600 1352600 0 4492 2993 4663 10816 7693 7693 1 35309 0 FLENVAAAETEKQVALAQGR PSADTSSERSIYKARFLENVAAAETEKQVA AAAETEKQVALAQGRAETLAGAMPNEAGGH R F L G R A 5 1 1 0 0 2 3 1 0 0 2 1 0 1 0 0 1 0 0 2 0 0 20 1 2144.1226 Q9Y613 Q9Y613 443 462 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 3 0.0068656 68.525 By MS/MS 3 0 1 1 943050 943050 0 4493 2993 4664 10817 7694 7694 1 24618 0 FLEQLQELDAK ALVTAILEAPVTEPRFLEQLQELDAKAAAV TEPRFLEQLQELDAKAAAVREQEARGTAAC R F L A K A 1 0 0 1 0 2 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 11 0 1332.6925 Q8N1B4 Q8N1B4 195 205 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 4.327E-49 299.28 By MS/MS 5 0.816 1 1 1 3 5336600 5336600 0 4494 1897 4665 10818;10819;10820 7695;7696 7695 2 143520 0 FLEQQNK KTLNNKFASFIDKVRFLEQQNKVLDTKWTL ASFIDKVRFLEQQNKVLDTKWTLLQEQGTK R F L N K V 0 0 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 905.46068 CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P05787;CON__P07744;P05787;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__Q9NSB2;CON__Q6ISB0;P08729;Q9NSB2;CON__H-INV:HIT000292931;CON__Q61726;CON__O43790;CON__Q6NT21;CON__P78385;CON__Q14533;CON__P78386;P14136;P08670;O43790;P78385;Q14533;P78386;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__P13647 188 194 KRT6A;KRT75;KRT8;KRT7;KRT84;GFAP;VIM;KRT86;KRT83;KRT81;KRT85;KRT6C;KRT6B;KRT5;KRT78 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Glial fibrillary acidic protein;Vimentin;Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb5;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 78 no no 2 0.013663 143.85 By MS/MS By MS/MS 6.4 3.04 2 1 1 1 2 2 1 6 4 5202900 3131000 2071900 + 4495 50;36;53;449;61;62 4666 10821;10822;10823;10824;10825;10826;10827;10828;10829;10830 7697;7698;7699;7700;7701;7702 7701 6 1662100 6878500 FLEQQNKVLETK KTLNNKFASFIDKVRFLEQQNKVLETKWTL KVRFLEQQNKVLETKWTLLQEQGTKTVRQN R F L T K W 0 0 1 0 0 2 2 0 0 0 2 2 0 1 0 0 1 0 0 1 0 0 12 1 1475.7984 CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P07744;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__P02538 183 194 KRT6A;KRT75;KRT78 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 78 no no 2 0.0014711 152.7 By MS/MS 3.5 0.5 1 1 2 174250 0 174250 + 4496 36;62 4667 10831;10832 7703 7703 1 0 273970 FLEQQNQVLETK KVLNDKFASFIDKVRFLEQQNQVLETKWEL KVRFLEQQNQVLETKWELLQQLDLNNCKKN R F L T K W 0 0 1 0 0 3 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1475.762 CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q14CN4-1;CON__Q6IME9;CON__Q3SY84;Q14CN4;Q3SY84 CON__Q7RTS7 160 171 KRT74;KRT73;KRT72;KRT71 Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71 yes no 2 1.5929E-06 165.35 By MS/MS By MS/MS 4.89 2.47 1 1 1 1 1 1 2 1 2 7 1212000 762790 449230 + 4497 57 4668 10833;10834;10835;10836;10837;10838;10839;10840;10841 7704;7705;7706;7707;7708;7709;7710 7705 5 201590 962640 FLEQQNQVLQTK KSLNNQFASFIDKVRFLEQQNQVLQTKWEL KVRFLEQQNQVLQTKWELLQQVDTSTRTHN R F L T K W 0 0 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1474.778 P04264;CON__P04264;CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;CON__Q9R0H5;CON__ENSEMBL:ENSBTAP00000038253;CON__Q7Z794;Q7Z794 P04264 200 211 KRT1;KRT2;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b no no 2 3.7032E-56 296.65 By MS/MS By MS/MS 5.33 2.94 2 1 2 2 1 1 1 2 2 1 10 5 232450000 191730000 40712000 + 4498 450;45;52;32;63 4669 10842;10843;10844;10845;10846;10847;10848;10849;10850;10851;10852;10853;10854;10855;10856 7711;7712;7713;7714;7715;7716;7717;7718;7719;7720;7721;7722;7723;7724;7725;7726;7727;7728;7729;7730;7731;7732;7733 7727 23 45358000 97633000 FLESPDFQPNIAK AAWPHLQLVYEFFLRFLESPDFQPNIAKKY LRFLESPDFQPNIAKKYIDQKFVLALLDLF R F L A K K 1 0 1 1 0 1 1 0 0 1 1 1 0 2 2 1 0 0 0 0 0 0 13 0 1504.7562 Q13362;Q14738 Q14738 220 232 PPP2R5C;PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform no no 2 1.8487E-18 231.42 By MS/MS 5.5 0.5 1 1 2 2850400 2850400 0 4499 1444;1359 4670 10857;10858 7734 7734 1 51023 0 FLFPEYILDPEPQPTR VDTEGFGEGGDMQERFLFPEYILDPEPQPT LFPEYILDPEPQPTREKQLQELQQQQEEEE R F L T R E 0 1 0 1 0 1 2 0 0 1 2 0 0 2 4 0 1 0 1 0 0 0 16 0 1960.9935 Q8NC60 Q8NC60 72 87 NOA1 Nitric oxide-associated protein 1 yes yes 2 8.558E-06 141.38 By MS/MS 5.5 0.5 1 1 2 367000 367000 0 4500 1951 4671 10859;10860 7735;7736 7736 2 4887.5 0 FLGCVDIK QTIGNHASYYKDALRFLGCVDIKDLPVSEQ YYKDALRFLGCVDIKDLPVSEQQERAFTLG R F L I K D 0 0 0 1 1 0 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 950.48954 Q9UNM6 Q9UNM6 179 186 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.019355 107.59 By MS/MS 7 0 1 1 4797300 4797300 0 4501 2845 4672 10861 7737 7737 1 85729 0 FLGCVDIKDLPVSEQQER QTIGNHASYYKDALRFLGCVDIKDLPVSEQ CVDIKDLPVSEQQERAFTLGLAGLLGEGVF R F L E R A 0 1 0 2 1 2 2 1 0 1 2 1 0 1 1 1 0 0 0 2 0 0 18 1 2132.0572 Q9UNM6 Q9UNM6 179 196 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 3 0.0023929 97.095 By MS/MS 7 0 1 1 3891200 3891200 0 4502 2845 4673 10862 7738 7738 1 69537 0 FLGDASEAYLK IYRTHADRLHNDLFKFLGDASEAYLKHFTK DLFKFLGDASEAYLKHFTKELKATTARCGL K F L L K H 2 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1212.6027 Q9HBF4 Q9HBF4 279 289 ZFYVE1 Zinc finger FYVE domain-containing protein 1 yes yes 2 0.010349 98.048 By MS/MS 5 0 1 1 590820 590820 0 4503 2550 4674 10863 7739 7739 1 24285 0 FLGTEPEPDAVGLDSGHIR ESKRFQLVDSRSQGRFLGTEPEPDAVGLDS EPEPDAVGLDSGHIRGAVNMPFMDFLTEDG R F L I R G 1 1 0 2 0 0 2 3 1 1 2 0 0 1 2 1 1 0 0 1 0 0 19 0 2008.9854 Q16762 Q16762 188 206 TST Thiosulfate sulfurtransferase yes yes 3 0.0096152 70.96 By MS/MS 7.5 0.5 1 1 2 2212900 2212900 0 4504 1546 4675 10864;10865 7740 7740 1 138670 0 FLGTVEKEATFSNPK LPKGTVSFHSHSDHRFLGTVEKEATFSNPK FLGTVEKEATFSNPKTTSPNKGKEKEAEDG R F L P K T 1 0 1 0 0 0 2 1 0 0 1 2 0 2 1 1 2 0 0 1 0 0 15 1 1666.8566 O75534 O75534 428 442 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.019813 69.729 By MS/MS 4.5 0.5 1 1 2 2013900 2013900 0 4505 316 4676 10866;10867 7741 7741 1 79101 0 FLHQDIDSGQGIR VRFVCNDDVYSGPLKFLHQDIDSGQGIRNT LKFLHQDIDSGQGIRNTYFEFETALACVPS K F L I R N 0 1 0 2 0 2 0 2 1 2 1 0 0 1 0 1 0 0 0 0 0 0 13 0 1484.7372 P11717 P11717 1053 1065 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.024108 88.163 By MS/MS 3 0 1 1 0 0 0 4506 557 4677 10868 7742 7742 1 0 0 FLILPDMLK VAQLEQVYIRGSKIRFLILPDMLKNAPMLK RGSKIRFLILPDMLKNAPMLKSMKNKNQGS R F L L K N 0 0 0 1 0 0 0 0 0 1 3 1 1 1 1 0 0 0 0 0 0 0 9 0 1088.6304 P62318 P62318 70 78 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 2 0.011789 98.299 By MS/MS 10 0 1 1 1517700 1517700 0 4507 1131 4678 10869 7743 7743 884 1 1613200 0 FLINLEGGDIR EPREMTADVIELKGKFLINLEGGDIREESS LKGKFLINLEGGDIREESSYKVIVMPTTKE K F L I R E 0 1 1 1 0 0 1 2 0 2 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1245.6717 Q9NSE4 Q9NSE4 960 970 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00010208 161.51 By MS/MS 5.33 1.25 1 1 1 3 3249900 3249900 0 4508 2624 4679 10870;10871;10872 7744;7745;7746 7744 3 89849 0 FLINLEGGDIREESSYK EPREMTADVIELKGKFLINLEGGDIREESS INLEGGDIREESSYKVIVMPTTKEKCPRCW K F L Y K V 0 1 1 1 0 0 3 2 0 2 2 1 0 1 0 2 0 0 1 0 0 0 17 1 1968.9793 Q9NSE4 Q9NSE4 960 976 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 3 0.0037066 96.489 By MS/MS 4 0 1 1 725410 725410 0 4509 2624 4680 10873 7747 7747 1 19803 0 FLIQNVLR DVLKDVLLPWYNAYRFLIQNVLRLQKEEEI PWYNAYRFLIQNVLRLQKEEEIEFLYNENT R F L L R L 0 1 1 0 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 1 0 0 8 0 1001.6022 P41252 P41252 662 669 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00011737 193.7 By MS/MS 4 0.816 1 1 1 3 5033600 5033600 0 4510 840 4681 10874;10875;10876 7748;7749;7750 7749 3 134690 0 FLKGDTTDLLK IQSTEEFENALKEMRFLKGDTTDLLKYARN KEMRFLKGDTTDLLKYARNINSHFANKKCQ R F L L K Y 0 0 0 2 0 0 0 1 0 0 3 2 0 1 0 0 2 0 0 0 0 0 11 1 1249.6918 O43264 O43264 380 390 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 3 0.00061461 129 By MS/MS 4.5 0.5 1 1 2 3510900 3510900 0 4511 189 4682 10877;10878 7751 7751 1 99656 0 FLLADNLYCK YMQKKKESTNSMETRFLLADNLYCKASVPP SMETRFLLADNLYCKASVPPTDKVCLWLGA R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 P61758 P61758 105 114 VBP1 Prefoldin subunit 3 yes yes 2 0.00015623 159.28 By MS/MS 9 0 1 1 2651400 2651400 0 4512 1105 4683 10879 7752 7752 1 1521700 0 FLLDHQGELFPSPDPSGL AITLKAINPINTFTKFLLDHQGELFPSPDP DHQGELFPSPDPSGL_______________ K F L G L - 0 0 0 2 0 1 1 2 1 0 4 0 0 2 3 2 0 0 0 0 0 0 18 0 1967.9629 Q07960 Q07960 422 439 ARHGAP1 Rho GTPase-activating protein 1 yes yes 2 1.5409E-07 155.08 By MS/MS 6 0 1 1 1877300 1877300 0 4513 1286 4684 10880 7753 7753 1 14639 0 FLLESFNNDR DYIQGLLDLKSRFDRFLLESFNNDRLFKQT SRFDRFLLESFNNDRLFKQTIAGDFEYFLN R F L D R L 0 1 2 1 0 0 1 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 10 0 1253.6041 Q13618 Q13618 355 364 CUL3 Cullin-3 yes yes 2 0.0015555 118.71 By MS/MS 5 0.816 1 1 1 3 1422200 1422200 0 4514 1389 4685 10881;10882;10883 7754 7754 1 38741 0 FLLEYIAPMTEK DIHMNQIGFEREWHKFLLEYIAPMTEKLYP WHKFLLEYIAPMTEKLYPGYYTRAQFDLAF K F L E K L 1 0 0 0 0 0 2 0 0 1 2 1 1 1 1 0 1 0 1 0 0 0 12 0 1453.7527 Q02809 Q02809 615 626 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.00010102 155.11 By MS/MS 5.5 0.5 1 1 2 621390 621390 0 4515 1256 4686 10884;10885 7755 7755 1016 1 16550 0 FLLGISMTER VALSFHSLEDRIVKRFLLGISMTERFNLSV RIVKRFLLGISMTERFNLSVRQQVMKTSQL R F L E R F 0 1 0 0 0 0 1 1 0 1 2 0 1 1 0 1 1 0 0 0 0 0 10 0 1165.6165 A6NJ78 A6NJ78 332 341 METTL15 Probable methyltransferase-like protein 15 yes yes 2 0.00060271 128.38 By MS/MS 7 0 1 1 878610 878610 0 4516 24 4687 10886 7756 7756 11 1 15701 0 FLLLQQK LEISQTLLGIIVRMKFLLLQQKYLEYLEDG LGIIVRMKFLLLQQKYLEYLEDGKVLEALQ K F L Q K Y 0 0 0 0 0 2 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 7 0 888.54329 Q9H7D7 Q9H7D7 213 219 WDR26 WD repeat-containing protein 26 yes yes 2 0.00068548 197.65 By MS/MS 5 0 1 1 1081400 1081400 0 4517 2515 4688 10887 7757 7757 1 44449 0 FLLQDTVELR MCSLMLSKELPARIRFLLQDTVELREHHWV PARIRFLLQDTVELREHHWVPRKAFLDNGP R F L L R E 0 1 0 1 0 1 1 0 0 0 3 0 0 1 0 0 1 0 0 1 0 0 10 0 1232.6765 P78344 P78344 296 305 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00043775 147.4 By MS/MS 4.5 0.5 1 1 2 663530 663530 0 4518 1192 4689 10888;10889 7758 7758 1 19154 0 FLLSESGSGK FHKTLRRLVPDSDVRFLLSESGSGKGAAMV DSDVRFLLSESGSGKGAAMVTAVAYRLAEQ R F L G K G 0 0 0 0 0 0 1 2 0 0 2 1 0 1 0 3 0 0 0 0 0 0 10 0 1023.5237 P19367 P19367 442 451 HK1 Hexokinase-1 yes yes 2 0.00098936 123.35 By MS/MS 4.5 0.5 1 1 2 4875800 4875800 0 4519 630 4690 10890;10891 7759 7759 1 141690 0 FLLSLPEHR EGLPKNPDLRIAQLRFLLSLPEHRGDAAVR RIAQLRFLLSLPEHRGDAAVRDELMAAVRD R F L H R G 0 1 0 0 0 0 1 0 1 0 3 0 0 1 1 1 0 0 0 0 0 0 9 0 1110.6186 Q15008 Q15008 24 32 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.003615 118.74 By MS/MS 6.5 0.5 1 1 2 2882600 2882600 0 4520 1460 4691 10892;10893 7760 7760 1 36331 0 FLLVGQTMPTLLDEDLTK ETRQGVYSICLQLARFLLVGQTMPTLLDED VGQTMPTLLDEDLTKDGIEALSSRPFRNVS R F L T K D 0 0 0 2 0 1 1 1 0 0 5 1 1 1 1 0 3 0 0 1 0 0 18 0 2033.0755 Q9UPU5 Q9UPU5 1245 1262 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0055048 87.18 By MS/MS 2 0 1 1 58518 58518 0 4521 2854 4692 10894 7761;7762 7761 1638 2 2908.6 0 FLLVYLHGDDHQDSDEFCR GTYSQALNDAKRELRFLLVYLHGDDHQDSD YLHGDDHQDSDEFCRNTLCAPEVISLINTR R F L C R N 0 1 0 4 1 1 1 1 2 0 3 0 0 2 0 1 0 0 1 1 0 0 19 0 2365.0433 Q96CS3 Q96CS3 172 190 FAF2 FAS-associated factor 2 yes yes 3 0.0008294 106.35 By MS/MS 6 0 1 1 2868300 2868300 0 4522 2140 4693 10895 7763 7763 1 22367 0 FLLYDQTK TSTDQVPIQHELFERFLLYDQTKAPPFVAR QHELFERFLLYDQTKAPPFVARETLRAWQE R F L T K A 0 0 0 1 0 1 0 0 0 0 2 1 0 1 0 0 1 0 1 0 0 0 8 0 1026.5386 Q9Y2S7 Q9Y2S7 200 207 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 0.022336 103.74 By MS/MS 7.5 0.5 1 1 2 5338700 5338700 0 4523 2900 4694 10896;10897 7764 7764 1 194480 0 FLMLGTCTGQLK DESGFTCCAFSARERFLMLGTCTGQLKLYN RERFLMLGTCTGQLKLYNVFSGQEEASYNC R F L L K L 0 0 0 0 1 1 0 2 0 0 3 1 1 1 0 0 2 0 0 0 0 0 12 0 1367.6941 Q9Y4B6 Q9Y4B6 1107 1118 VPRBP Protein VPRBP yes yes 2 3.0125E-24 244.61 By MS/MS 3 0 1 1 374040 374040 0 4524 2950 4695 10898 7765 7765 1702 1 9764.2 0 FLMSLVNQVPK DVLSGKVSADNTVGRFLMSLVNQVPKIVPD TVGRFLMSLVNQVPKIVPDDFETMLNSNIN R F L P K I 0 0 1 0 0 1 0 0 0 0 2 1 1 1 1 1 0 0 0 2 0 0 11 0 1274.7057 O00303 O00303 307 317 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 3.2074E-11 209.21 By MS/MS 6.2 0.748 1 2 2 5 9307100 9307100 0 4525 88 4696;4697 10899;10900;10901;10902;10903 7766;7767;7768 7766 51 3 96810 0 FLNAENAQK DFADECPKPELLAIRFLNAENAQKFKTKFE ELLAIRFLNAENAQKFKTKFEECRKEIEER R F L Q K F 2 0 2 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1033.5193 P43487 P43487 142 150 RANBP1 Ran-specific GTPase-activating protein yes yes 2 0.00092964 143.7 By MS/MS 9 0.816 1 1 1 3 20981000 20981000 0 4526 865 4698 10904;10905;10906 7769;7770 7769 2 1809800 0 FLNLSSSPSMAVR APQVMSLHVDTLVTKFLNLSSSPSMAVRIA TKFLNLSSSPSMAVRIAALQCMHALTRLPT K F L V R I 1 1 1 0 0 0 0 0 0 0 2 0 1 1 1 4 0 0 0 1 0 0 13 0 1407.718 Q96T76 Q96T76 959 971 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.0021346 113.67 By MS/MS 4 0 1 1 1060500 1060500 0 4527 2261 4699 10907 7771;7772 7771 1422 2 28951 0 FLNQIKVQEK EASTWLKNFKTTNERFLNQIKVQEKYVWNK TTNERFLNQIKVQEKYVWNKRESTEKGSPL R F L E K Y 0 0 1 0 0 2 1 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1245.7081 P51398 P51398 198 207 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 0.016319 87.149 By MS/MS 7 0 1 1 2081500 2081500 0 4528 963 4700 10908 7773 7773 1 37197 0 FLPDDEAAQALGK RLNGALRQEQNFADRFLPDDEAAQALGKTC DRFLPDDEAAQALGKTCWEALVSPVVQNIT R F L G K T 3 0 0 2 0 1 1 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 13 0 1373.6827 Q14999;Q8IWT3 Q14999 1028 1040 CUL7;CUL9 Cullin-7;Cullin-9 yes no 2 0.012514 91.961 By MS/MS 2.5 0.5 1 1 2 525800 525800 0 4529 1453 4701 10909;10910 7774 7774 1 18160 0 FLPGMAIGYSSSK VQCEIDEDVIQVSKKFLPGMAIGYSSSKLT KKFLPGMAIGYSSSKLTLHVGDGFEFMKQN K F L S K L 1 0 0 0 0 0 0 2 0 1 1 1 1 1 1 3 0 0 1 0 0 0 13 0 1356.6748 P19623 P19623 136 148 SRM Spermidine synthase yes yes 2 0.0090991 90.913 By MS/MS 8.5 0.5 1 1 2 2331300 2331300 0 4530 635 4702 10911;10912 7775 7775 428 1 202220 0 FLPGYVGGIQEGAVTPAGVVNK FQVLLYTSLPDFCHKFLPGYVGGIQEGAVT GIQEGAVTPAGVVNKYQINGLQAWLLTHLL K F L N K Y 2 0 1 0 0 1 1 5 0 1 1 1 0 1 2 0 1 0 1 4 0 0 22 0 2172.1579 Q9UBM7 Q9UBM7 121 142 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.055055 53.403 By MS/MS 2 0.816 1 1 1 3 308440 308440 0 4531 2753 4703 10913;10914;10915 7776 7776 1 12609 0 FLPLPVVQLLDR VKVVSSGAPHAILLKFLPLPVVQLLDRCGL LLKFLPLPVVQLLDRCGLLTRFSPFLQAST K F L D R C 0 1 0 1 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 2 0 0 12 0 1408.8442 Q6NUM9 Q6NUM9 213 224 RETSAT All-trans-retinol 13,14-reductase yes yes 2 0.031041 80.24 By MS/MS 6 0 1 1 600750 600750 0 4532 1691 4704 10916 7777 7777 1 4684.7 0 FLQDTIEEMALK ERLKKELRVKLELAKFLQDTIEEMALKNKA LAKFLQDTIEEMALKNKAAKGSATKDFSVF K F L L K N 1 0 0 1 0 1 2 0 0 1 2 1 1 1 0 0 1 0 0 0 0 0 12 0 1436.7221 O95202 O95202 263 274 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 2.2092E-16 215.87 By MS/MS 4.67 0.471 1 2 3 3069600 3069600 0 4533 374 4705;4706 10917;10918;10919 7778;7779 7779 201 2 124990 0 FLQDYFDGNLKR VMQEEFSRDGKALERFLQDYFDGNLKRYLK LERFLQDYFDGNLKRYLKSEPIPESNDGPV R F L K R Y 0 1 1 2 0 1 0 1 0 0 2 1 0 2 0 0 0 0 1 0 0 0 12 1 1514.7518 P30101 P30101 352 363 PDIA3 Protein disulfide-isomerase A3 yes yes 3 0.044467 67.749 By MS/MS 6 0 1 1 5684500 5684500 0 4534 736 4707 10920 7780 7780 1 44328 0 FLQEFYQDDELGK MALKDYALEKEKVKKFLQEFYQDDELGKKQ KKFLQEFYQDDELGKKQFKYGNQLVRLAHR K F L G K K 0 0 0 2 0 2 2 1 0 0 2 1 0 2 0 0 0 0 1 0 0 0 13 0 1630.7515 P33993 P33993 16 28 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.00014545 152.38 By MS/MS 4.5 0.5 1 1 2 724630 724630 0 4535 775 4708 10921;10922 7781 7781 1 28099 0 FLQEFYQDDELGKK MALKDYALEKEKVKKFLQEFYQDDELGKKQ KFLQEFYQDDELGKKQFKYGNQLVRLAHRE K F L K K Q 0 0 0 2 0 2 2 1 0 0 2 2 0 2 0 0 0 0 1 0 0 0 14 1 1758.8465 P33993 P33993 16 29 MCM7 DNA replication licensing factor MCM7 yes yes 2 2.0784E-17 221.09 By MS/MS 5 0 1 1 1922400 1922400 0 4536 775 4709 10923 7782 7782 1 79020 0 FLQEHLAPK GLSEEQRQLRQTMAKFLQEHLAPKAQEIDR RQTMAKFLQEHLAPKAQEIDRSNEFKNLRE K F L P K A 1 0 0 0 0 1 1 0 1 0 2 1 0 1 1 0 0 0 0 0 0 0 9 0 1081.592 P26440 P26440 59 67 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.004006 117.89 By MS/MS 7 0 1 1 1570900 1570900 0 4537 696 4710 10924 7783 7783 1 28073 0 FLQFVTGTSK FWRALRSFDQADRAKFLQFVTGTSKVPLQG ADRAKFLQFVTGTSKVPLQGFAALEGMNGI K F L S K V 0 0 0 0 0 1 0 1 0 0 1 1 0 2 0 1 2 0 0 1 0 0 10 0 1126.6023 Q7Z6Z7 Q7Z6Z7 4296 4305 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00060699 148.56 By MS/MS 2 0.816 1 1 1 3 730640 730640 0 4538 1803 4711 10925;10926;10927 7784 7784 1 29949 0 FLQKEEQR EELRFLRRQELRELRFLQKEEQRAQQQLNS QELRELRFLQKEEQRAQQQLNSKLQQQREQ R F L Q R A 0 1 0 0 0 2 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 1 1076.5615 Q9H2G2 Q9H2G2 836 843 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.038593 136.27 By MS/MS 2 0 1 1 271690 271690 0 4539 2476 4712 10928 7785 7785 1 13505 0 FLQLESLQELMK CIKQCDPEKMITESKFLQLESLQELMKALV ESKFLQLESLQELMKALVSVTPDEETYDEE K F L M K A 0 0 0 0 0 2 2 0 0 0 4 1 1 1 0 1 0 0 0 0 0 0 12 0 1477.7851 Q92538 Q92538 1125 1136 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 3.9353E-07 178.53 By MS/MS 3 0.816 1 1 1 3 520460 520460 0 4540 2055 4713 10929;10930;10931 7786;7787;7788 7788 1333 3 19548 0 FLQMCNDDPDVLPDLK MEGMGPEHSSARPERFLQMCNDDPDVLPDL LQMCNDDPDVLPDLKEANFDINQLYDCNWV R F L L K E 0 0 1 4 1 1 0 0 0 0 3 1 1 1 2 0 0 0 0 1 0 0 16 0 1918.8805 Q02218 Q02218 798 813 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.0063374 94.781 By MS/MS 4 0 1 1 378970 378970 0 4541 1251 4714 10932 7789 7789 1012 1 10345 0 FLQQEQSVFR RRRMKLRDLMEAAFKFLQQEQSVFRELWDW EAAFKFLQQEQSVFRELWDWSVCVPLLRSH K F L F R E 0 1 0 0 0 3 1 0 0 0 1 0 0 2 0 1 0 0 0 1 0 0 10 0 1280.6513 Q9NU22 Q9NU22 155 164 MDN1 Midasin yes yes 2 0.00097847 123.86 By MS/MS 1.5 0.5 1 1 2 597580 597580 0 4542 2635 4715 10933;10934 7790;7791 7790 2 29353 0 FLRENPYYDSR ALAKIYIDSNNNPERFLRENPYYDSRVVGK NPERFLRENPYYDSRVVGKYCEKRDPHLAC R F L S R V 0 2 1 1 0 0 1 0 0 0 1 0 0 1 1 1 0 0 2 0 0 0 11 1 1458.6892 Q00610 Q00610 893 903 CLTC Clathrin heavy chain 1 yes yes 3 0.019479 85.924 By MS/MS 2.67 1.25 1 1 1 3 1514500 1514500 0 4543 1235 4716 10935;10936;10937 7792;7793 7792 2 50039 0 FLREPVVTPQDLEGPGR PACLLDGLVRLQHLRFLREPVVTPQDLEGP REPVVTPQDLEGPGRAESKESVGSRDSSKR R F L G R A 0 2 0 1 0 1 2 2 0 0 2 0 0 1 3 0 1 0 0 2 0 0 17 1 1909.0058 Q66K74 Q66K74 453 469 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.0037791 96.096 By MS/MS 3 0 1 1 694360 694360 0 4544 1670 4717 10938 7794 7794 1 18126 0 FLSAEEYQQK NAGAVVLTPLFKVGKFLSAEEYQQKIIPVV FKVGKFLSAEEYQQKIIPVVVKMFSSTDRA K F L Q K I 1 0 0 0 0 2 2 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 10 0 1241.5928 Q96KG9 Q96KG9 340 349 SCYL1 N-terminal kinase-like protein yes yes 2 1.0761E-37 279.87 By MS/MS 4.5 0.5 1 1 2 2515200 2515200 0 4545 2220 4718 10939;10940 7795 7795 1 73864 0 FLSDPQVHTVLVER EAALEEKSALEQMRKFLSDPQVHTVLVERS KFLSDPQVHTVLVERSTLKEDVGDEGEEEK K F L E R S 0 1 0 1 0 1 1 0 1 0 2 0 0 1 1 1 1 0 0 3 0 0 14 0 1638.873 Q14204 Q14204 68 81 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00089804 146.67 By MS/MS 1 0 1 1 289730 289730 0 4546 1421 4719 10941 7796 7796 1 14156 0 FLSNLQTLDLR LGDNRVTHIADGVFRFLSNLQTLDLRNNEI GVFRFLSNLQTLDLRNNEISWAIEDASEAF R F L L R N 0 1 1 1 0 1 0 0 0 0 4 0 0 1 0 1 1 0 0 0 0 0 11 0 1318.7245 O94898 O94898 357 367 LRIG2 Leucine-rich repeats and immunoglobulin-like domains protein 2 yes yes 2 0.049214 76.927 By MS/MS 3 0 1 1 125480 125480 0 4547 356 4720 10942 7797 7797 1 3275.6 0 FLSQIESDR QISETLKTRGIFETKFLSQIESDRLALLQV GIFETKFLSQIESDRLALLQVRAILQQLGL K F L D R L 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 2 0 0 0 0 0 0 9 0 1093.5404 P19367;Q2TB90 P19367 786 794 HK1;HKDC1 Hexokinase-1;Putative hexokinase HKDC1 yes no 2 0.0013728 136.57 By MS/MS 4 0 1 1 1717500 1717500 0 4548 630 4721 10943 7798 7798 1 46885 0 FLSQLLER GLFPCVDELSDIHTRFLSQLLERRRQALCP LSDIHTRFLSQLLERRRQALCPGSTRNFVI R F L E R R 0 1 0 0 0 1 1 0 0 0 3 0 0 1 0 1 0 0 0 0 0 0 8 0 1004.5655 Q92974 Q92974 293 300 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.013709 114.89 By MS/MS 4 0 1 1 783720 783720 0 4549 2094 4722 10944 7799 7799 1 21395 0 FLSQPFQVAEVFTGHMGK EEDKLTVSRARKIQRFLSQPFQVAEVFTGH QPFQVAEVFTGHMGKLVPLKETIKGFQQIL R F L G K L 1 0 0 0 0 2 1 2 1 0 1 1 1 3 1 1 1 0 0 2 0 0 18 0 2022.0033 P06576 P06576 463 480 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3 0.0015684 120.77 By MS/MS 6 0 2 2 45268000 45268000 0 4550 478 4723;4724 10945;10946 7800;7801 7801 266 2 353000 0 FLSSAAAVSK GAAMNVAYTDGDLERFLSSAAAVSKEHPVV GDLERFLSSAAAVSKEHPVVISKFIQEAKE R F L S K E 3 0 0 0 0 0 0 0 0 0 1 1 0 1 0 3 0 0 0 1 0 0 10 0 979.53385 P27708 P27708 1110 1119 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0007548 134.23 By MS/MS 2 0.816 1 1 1 3 4503200 4503200 0 4551 709 4725 10947;10948;10949 7802;7803;7804 7803 3 203970 0 FLSTEAISIMR EVFDSIVNDEVRYPRFLSTEAISIMRRLLR RYPRFLSTEAISIMRRLLRRNPERRLGASE R F L M R R 1 1 0 0 0 0 1 0 0 2 1 0 1 1 0 2 1 0 0 0 0 0 11 0 1266.6642 Q16513 Q16513 879 889 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.00025458 147.95 By MS/MS 3 0 1 1 428200 428200 0 4552 1535 4726 10950 7805 7805 1168 1 11178 0 FLTAVNLEHPEMLEK FLSVMLEKGSLSAMRFLTAVNLEHPEMLEK FLTAVNLEHPEMLEKASRELWMRVWSRNED R F L E K A 1 0 1 0 0 0 3 0 1 0 3 1 1 1 1 0 1 0 0 1 0 0 15 0 1769.9022 Q9Y2Q3 Q9Y2Q3 102 116 GSTK1 Glutathione S-transferase kappa 1 yes yes 2 0.0018947 112.51 By MS/MS 9 0 1 1 387930 387930 0 4553 2895 4727 10951 7806 7806 1667 1 222640 0 FLTFDSPEGK PYDLERPLETDSDLRFLTFDSPEGKAVFWH DSDLRFLTFDSPEGKAVFWHSSTHVLGAAA R F L G K A 0 0 0 1 0 0 1 1 0 0 1 1 0 2 1 1 1 0 0 0 0 0 10 0 1139.5499 Q9BW92 Q9BW92 119 128 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.00040831 172.94 By MS/MS By matching 6.2 1.17 2 1 1 1 4 1 20280000 20238000 42599 4554 2391 4728 10952;10953;10954;10955;10956 7807;7808;7809 7807 3 638830 126050 FLTGPLNLNDPDAK PIRAEMPGNLQHYGRFLTGPLNLNDPDAKC RFLTGPLNLNDPDAKCRFPKIFVNTDDTYE R F L A K C 1 0 2 2 0 0 0 1 0 0 3 1 0 1 2 0 1 0 0 0 0 0 14 0 1513.7777 P86791;P86790 P86791 282 295 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 2 1.8971E-18 228.93 By MS/MS 6 0 1 1 1705300 1705300 0 4555 1222 4729 10957 7810 7810 1 13298 0 FLTGYEVK DRDRETVRAKSIEMKFLTGYEVKVMEDAHL AKSIEMKFLTGYEVKVMEDAHLDAILILGE K F L V K V 0 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 1 0 0 8 0 955.50148 Q8NI60 Q8NI60 546 553 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 0.038799 95.741 By MS/MS 6.5 0.5 1 1 2 6782400 6782400 0 4556 1978 4730 10958;10959 7811 7811 1 56780 0 FLTKGDNNAVDDR HRVLKIHEKQNGHIKFLTKGDNNAVDDRGL IKFLTKGDNNAVDDRGLYKQGQHWLEKKDV K F L D R G 1 1 2 3 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 13 1 1463.7005 P67812;P0C7V7 P67812 111 123 SEC11A;SEC11B Signal peptidase complex catalytic subunit SEC11A;Putative signal peptidase complex catalytic subunit SEC11B yes no 3 0.034409 68.809 By MS/MS 9 0 1 1 0 0 0 4557 1183 4731 10960 7812 7812 1 0 0 FLTQPQVVAR AYGAAKAGGSFDLRRFLTQPQVVARAVCLV FDLRRFLTQPQVVARAVCLVFALIVFSCIY R F L A R A 1 1 0 0 0 2 0 0 0 0 1 0 0 1 1 0 1 0 0 2 0 0 10 0 1157.6557 O43760 O43760 20 29 SYNGR2 Synaptogyrin-2 yes yes 2 0.0057193 105.1 By MS/MS 8.5 0.5 1 1 2 3040500 3040500 0 4558 221 4732 10961;10962 7813 7813 1 945230 0 FLVGFTNK LFVKGEDFPANNIVKFLVGFTNKGTEDFIV PANNIVKFLVGFTNKGTEDFIVESLDASFR K F L N K G 0 0 1 0 0 0 0 1 0 0 1 1 0 2 0 0 1 0 0 1 0 0 8 0 924.5069 P43307 P43307 103 110 SSR1 Translocon-associated protein subunit alpha yes yes 2 0.019122 107.9 By MS/MS By matching 7.67 0.471 1 2 2 1 11618000 11586000 32103 4559 863 4733 10963;10964;10965 7814;7815 7815 2 726040 273880 FLVQEIMFDR DNTLSLEHQKFLKHKFLVQEIMFDRCLDKA FLKHKFLVQEIMFDRCLDKAPTVRSKALSS K F L D R C 0 1 0 1 0 1 1 0 0 1 1 0 1 2 0 0 0 0 0 1 0 0 10 0 1296.6536 P42695 P42695 443 452 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 0.0003948 141.95 By MS/MS 3 0 2 2 420200 420200 0 4560 853 4734;4735 10966;10967 7816;7817;7818 7816 603 3 10969 0 FLVTVIK IGSISGAMHEEDEKRFLVTVIKDLLGLCEQ MHEEDEKRFLVTVIKDLLGLCEQKRGKDNK R F L I K D 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 1 0 0 2 0 0 7 0 818.52658 O14980 O14980 516 522 XPO1 Exportin-1 yes yes 2 0.011025 151.17 By MS/MS 4 0 1 1 486670 486670 0 4561 142 4736 10968 7819 7819 1 13285 0 FLWESYR TQDRTDRLLLTPWVKFLWESYRQCLDLLRN LLLTPWVKFLWESYRQCLDLLRNNSRVERL K F L Y R Q 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 7 0 999.48142 Q14152 Q14152 152 158 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.036253 110.63 By MS/MS 3.5 0.5 1 1 2 4323900 4323900 0 4562 1409 4737 10969;10970 7820;7821 7820 2 113210 0 FLYECPWR SMENWGGATFDVAMRFLYECPWRRLQELRE TFDVAMRFLYECPWRRLQELRELIPNIPFQ R F L W R R 0 1 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 8 0 1169.5328 P11498 P11498 618 625 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.032287 98.299 By MS/MS 4.5 0.5 1 1 2 905270 905270 0 4563 555 4738 10971;10972 7822 7822 1 26844 0 FLYIWPNAR GAGNYGMCGRAYSPRFLYIWPNARISVMGG RAYSPRFLYIWPNARISVMGGEQAANVLAT R F L A R I 1 1 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 9 0 1178.6237 Q9HCC0 Q9HCC0 461 469 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.013423 100.45 By MS/MS 5.5 0.5 1 1 2 3255900 3255900 0 4564 2559 4739 10973;10974 7823 7823 1 28027 0 FMELNLAQK DTVLKKLDEQYQKYKFMELNLAQKKRRLKG QYQKYKFMELNLAQKKRRLKGQIPEIKQTL K F M Q K K 1 0 1 0 0 1 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 9 0 1092.5638 P61758 P61758 62 70 VBP1 Prefoldin subunit 3 yes yes 2 0.00011386 166.3 By MS/MS 9 0 1 1 970430 970430 0 4565 1105 4740 10975 7824 7824 864 1 556940 0 FMEPYIFGSR DARVHLGHKAGCRHRFMEPYIFGSRLDHDI GCRHRFMEPYIFGSRLDHDIIDLEQTATHL R F M S R L 0 1 0 0 0 0 1 1 0 1 0 0 1 2 1 1 0 0 1 0 0 0 10 0 1245.5852 Q9Y399 Q9Y399 101 110 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.006354 102.06 By MS/MS 8.75 0.829 2 1 1 4 4657600 4657600 0 4566 2920 4741;4742 10976;10977;10978;10979 7825;7826 7825 1680 2 424130 0 FMQDASDVMQLLLK IECISLIGLAVGKEKFMQDASDVMQLLLKT KFMQDASDVMQLLLKTQTDFNDMEDDDPQI K F M L K T 1 0 0 2 0 2 0 0 0 0 3 1 2 1 0 1 0 0 0 1 0 0 14 0 1637.8157 O00410 O00410 573 586 IPO5 Importin-5 yes yes 2 3.183E-13 210.79 By MS/MS 4 0 2 2 531670 531670 0 4567 91 4743;4744 10980;10981 7827;7828 7827 57;58 2 14514 0 FMRDPIR LSATMPSDVLEVTKKFMRDPIRILVKKEEL DVLEVTKKFMRDPIRILVKKEELTLEGIRQ K F M I R I 0 2 0 1 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 7 1 933.48546 P60842;Q14240 P60842 227 233 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 3 0.047126 85.265 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 113540000 113540000 0 4568 1074 4745 10982;10983;10984;10985;10986;10987;10988;10989 7829 7829 1 1029600 0 FMRDQEK KGAAGRTDLLRLRRRFMRDQEKLSLMYARK DLLRLRRRFMRDQEKLSLMYARKGVAEQKR R F M E K L 0 1 0 1 0 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 7 1 952.44365 P78527 P78527 2732 2738 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.046983 85.359 By MS/MS 1.5 0.5 1 1 2 225280 225280 0 4569 1197 4746 10990;10991 7830 7830 1 11092 0 FMYCTPFTLDGR KDRITYFDKNYNLRRFMYCTPFTLDGRAHG LRRFMYCTPFTLDGRAHGELHEQFKRKTIL R F M G R A 0 1 0 1 1 0 0 1 0 0 1 0 1 2 1 0 2 0 1 0 0 0 12 0 1506.6636 Q96N67 Q96N67 1941 1952 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.042546 70.808 By MS/MS 2 0 1 1 143530 143530 0 4570 2230 4747 10992 7831 7831 1 7134 0 FNADEFEDMVAEK GRQKIHISKKWGFTKFNADEFEDMVAEKRL TKFNADEFEDMVAEKRLIPDGCGVKYIPNR K F N E K R 2 0 1 2 0 0 3 0 0 0 0 1 1 2 0 0 0 0 0 1 0 0 13 0 1543.6501 P27635 P27635 176 188 RPL10 60S ribosomal protein L10 yes yes 2 5.8462E-46 273.24 By MS/MS 8.67 0.471 1 2 3 798020 798020 0 4571 707 4748;4749 10993;10994;10995 7832;7833 7832 477 2 417350 0 FNALKVPVPEDK ANVAKAGLVDDFEKKFNALKVPVPEDKYTA EKKFNALKVPVPEDKYTAQVDAEEKEDVKS K F N D K Y 1 0 1 1 0 0 1 0 0 0 1 2 0 1 2 0 0 0 0 2 0 0 12 1 1355.7449 O75947 O75947 74 85 ATP5H ATP synthase subunit d, mitochondrial yes yes 3 0.007565 124.6 By MS/MS 9 0 1 1 1446900 1446900 0 4572 340 4750 10996 7834 7834 1 830390 0 FNASQLITQR LPSIVNEVLKSVVAKFNASQLITQRAQVSL SVVAKFNASQLITQRAQVSLLIRRELTERA K F N Q R A 1 1 1 0 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 10 0 1176.6251 Q99623 Q99623 148 157 PHB2 Prohibitin-2 yes yes 2 3.3651E-07 219.72 By MS/MS By MS/MS 8 0.707 1 2 1 3 1 50942000 50448000 494320 4573 2277 4751 10997;10998;10999;11000 7835;7836;7837;7838 7837 4 3704500 4217200 FNDALTVVER GRLAEYFIGDVFAARFNDALTVVERLVKVT VFAARFNDALTVVERLVKVTLYGSQIKLYN R F N E R L 1 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 10 0 1162.5982 Q96QU8 Q96QU8 580 589 XPO6 Exportin-6 yes yes 2 1.4381E-05 175.33 By MS/MS 3.5 0.5 1 1 2 1367200 1367200 0 4574 2243 4752 11001;11002 7839 7839 1 37053 0 FNDGSDEK GKTSIAIDTIINQKRFNDGSDEKKKLYCIY TIINQKRFNDGSDEKKKLYCIYVAIGQKRS R F N E K K 0 0 1 2 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 8 0 910.36684 P25705 P25705 232 239 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0049921 137.14 By MS/MS By MS/MS 6 0 3 2 1 7154300 7123000 31361 4575 687 4753 11003;11004;11005 7840;7841 7841 2 55545 96183 FNDGSDEKK GKTSIAIDTIINQKRFNDGSDEKKKLYCIY IINQKRFNDGSDEKKKLYCIYVAIGQKRST R F N K K K 0 0 1 2 0 0 1 1 0 0 0 2 0 1 0 1 0 0 0 0 0 0 9 1 1038.4618 P25705 P25705 232 240 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 9.6921E-06 186.76 By MS/MS 6 0 2 2 2568200 2568200 0 4576 687 4754 11006;11007 7842;7843 7842 2 20027 0 FNDGSDEKKK GKTSIAIDTIINQKRFNDGSDEKKKLYCIY INQKRFNDGSDEKKKLYCIYVAIGQKRSTV R F N K K L 0 0 1 2 0 0 1 1 0 0 0 3 0 1 0 1 0 0 0 0 0 0 10 2 1166.5568 P25705 P25705 232 241 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0059987 135.71 By MS/MS By matching 6 0 2 1 1 1562800 1542800 19994 4577 687 4755 11008;11009 7844 7844 1 12031 61321 FNDILGR LYGYIDKYNIELDPRFNDILGRHSRKRWER YNIELDPRFNDILGRHSRKRWERFVHSENQ R F N G R H 0 1 1 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 833.43955 Q8NEV1;P68400 Q8NEV1 269 275 CSNK2A3;CSNK2A1 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha yes no 2 0.031543 113.89 By MS/MS By matching 7 0 2 1 1 2026600 2007300 19375 4578 1188 4756 11010;11011 7845 7845 1 35870 79537 FNECGHVLYADIK RNLPFDFTWKMLKDKFNECGHVLYADIKME DKFNECGHVLYADIKMENGKSKGCGVVKFE K F N I K M 1 0 1 1 1 0 1 1 1 1 1 1 0 1 0 0 0 0 1 1 0 0 13 0 1564.7344 P52272 P52272 673 685 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 3 0.014433 98.592 By MS/MS 5 0 1 1 782700 782700 0 4579 982 4757 11012 7846 7846 1 32172 0 FNESSQKLDLLK GKVTDRKALSEAQARFNESSQKLDLLKYSL QARFNESSQKLDLLKYSLEQRLNEVPKNHP R F N L K Y 0 0 1 1 0 1 1 0 0 0 3 2 0 1 0 2 0 0 0 0 0 0 12 1 1420.7562 Q16513 Q16513 261 272 PKN2 Serine/threonine-protein kinase N2 yes yes 3 0.034764 66.56 By MS/MS 3.5 0.5 1 1 2 1339300 1339300 0 4580 1535 4758 11013;11014 7847 7847 1 35966 0 FNEVAAQYSEDK GKIMEAMEKLKSGMRFNEVAAQYSEDKARQ GMRFNEVAAQYSEDKARQGGDLGWMTRGSM R F N D K A 2 0 1 1 0 1 2 0 0 0 0 1 0 1 0 1 0 0 1 1 0 0 12 0 1399.6256 Q9Y237 Q9Y237 64 75 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes yes 2 2.1417E-07 189.24 By MS/MS 10 0 1 1 611570 611570 0 4581 2865 4759 11015 7848 7848 1 650030 0 FNFACLEAR VPSGMLSVLGQPQSKFNFACLEAREHCKSL GQPQSKFNFACLEAREHCKSLGIENPVCEV K F N A R E 2 1 1 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 9 0 1126.523 Q8IVS2 Q8IVS2 204 212 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 0.00019118 164.68 By MS/MS 7 0 1 1 2588000 2588000 0 4582 1858 4760 11016 7849 7849 1 46249 0 FNGEDIDTISPTLGFNIK MLGLDNAGKTTILKKFNGEDIDTISPTLGF EDIDTISPTLGFNIKTLEHRGFKLNIWDVG K F N I K T 0 0 2 2 0 0 1 2 0 3 1 1 0 2 1 1 2 0 0 0 0 0 18 0 1979.984 P36404 P36404 36 53 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 8.3514E-05 134.04 By MS/MS 9.5 0.5 1 1 2 148610 148610 0 4583 802 4761 11017;11018 7850;7851 7850 2 97342 0 FNHWELK RVRADLRDNYSPGWKFNHWELKGVPIRLEV DNYSPGWKFNHWELKGVPIRLEVGPRDMKS K F N L K G 0 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 7 0 972.48175 P07814 P07814 1355 1361 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.013952 125.25 By MS/MS 3.5 0.5 2 2 4 5285700 5285700 0 4584 493 4762 11019;11020;11021;11022 7852;7853 7853 2 138620 0 FNISTDRR DTKSKVTLLEGDHVRFNISTDRRDKLERAT LEGDHVRFNISTDRRDKLERATNIEVLSNT R F N R R D 0 2 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 8 1 1007.5148 O75534 O75534 318 325 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.0031264 164.72 By MS/MS 5 0.816 1 1 1 3 3383300 3383300 0 4585 316 4763 11023;11024;11025 7854 7854 1 106050 0 FNLMQVGR QYGIISDAPINEVARFNLMQVGRLLQQLAM PINEVARFNLMQVGRLLQQLAMTGSEEGDP R F N G R L 0 1 1 0 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 8 0 963.49602 Q14C86 Q14C86 339 346 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0028768 140.98 By MS/MS 2.5 0.5 1 1 2 1122700 1122700 0 4586 1455 4764 11026;11027 7855;7856 7855 1143 2 41908 0 FNNYVDCMKK HFPMQSREFPPGTPRFNNYVDCMKKFLDAL PGTPRFNNYVDCMKKFLDALELSQSPMLLE R F N K K F 0 0 2 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 1 1 0 0 10 1 1317.5846 P78527 P78527 1736 1745 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0017953 121.73 By MS/MS 1.8 0.748 2 2 1 5 1545400 1545400 0 4587 1197 4765 11028;11029;11030;11031;11032 7857;7858;7859 7859 956 3 74336 0 FNPDGEEEDVTVQE ENAESEADFSIHFNRFNPDGEEEDVTVQE_ RFNPDGEEEDVTVQE_______________ R F N Q E - 0 0 1 2 0 1 4 1 0 0 0 0 0 1 1 0 1 0 0 2 0 0 14 0 1606.6635 Q5SW79 Q5SW79 1571 1584 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0035725 110.08 By MS/MS 2 0 1 1 139970 139970 0 4588 1621 4766 11033 7860 7860 1 6957.2 0 FNQVLDQFGEK YFLLTQAVRTGNLAKFNQVLDQFGEKFQAD NLAKFNQVLDQFGEKFQADGTYTLIIRLRH K F N E K F 0 0 1 1 0 2 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 0 11 0 1323.6459 O43242 O43242 375 385 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 4.7897E-07 187.16 By MS/MS 3 2.16 1 1 1 3 13104000 13104000 0 4589 187 4767 11034;11035;11036 7861;7862 7862 2 123680 0 FNTGPVGK QIRMCKDLKHLIYYRFNTGPVGKGPGCGFW KHLIYYRFNTGPVGKGPGCGFWAAGWRVWL R F N G K G 0 0 1 0 0 0 0 2 0 0 0 1 0 1 1 0 1 0 0 1 0 0 8 0 818.42865 Q6P2Q9 Q6P2Q9 616 623 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0066277 131.03 By MS/MS 2 0.816 1 1 1 3 1904000 1904000 0 4590 1706 4768 11037;11038;11039 7863;7864 7863 2 88085 0 FNTTSVIK EPRGNEEAQIFRPLKFNTTSVIKIAVEPVN QIFRPLKFNTTSVIKIAVEPVNPSELPKML K F N I K I 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 8 0 908.49673 Q15029 Q15029 582 589 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.010925 130.22 By MS/MS 4 0 1 1 1352900 1352900 0 4591 1466 4769 11040 7865 7865 1 36934 0 FNVEDGEIVQQVR WALGVVPFSHVNIVKFNVEDGEIVQQVRVS VKFNVEDGEIVQQVRVSTPWLQHLSGACGV K F N V R V 0 1 1 1 0 2 2 1 0 1 0 0 0 1 0 0 0 0 0 3 0 0 13 0 1531.7631 Q8N766 Q8N766 202 214 EMC1 ER membrane protein complex subunit 1 yes yes 2 4.5904E-73 322.27 By MS/MS 1.5 0.5 1 1 2 1078500 1078500 0 4592 1931 4770 11041;11042 7866;7867 7866 2 53033 0 FNVLQYVVPEVK QAPPTRIGLINDMVRFNVLQYVVPEVKDLY MVRFNVLQYVVPEVKDLYNWLEVEFNPLKL R F N V K D 0 0 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 4 0 0 12 0 1433.7919 Q14152 Q14152 377 388 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 7.6663E-05 184.24 By MS/MS 4.5 1.12 1 1 1 1 4 1925000 1925000 0 4593 1409 4771 11043;11044;11045;11046 7868;7869;7870;7871 7871 4 40049 0 FNVTGTPEQYVPYSTTR TKPLTARKFIWTNHKFNVTGTPEQYVPYST VTGTPEQYVPYSTTRKKIQEWIPPSTPYK_ K F N T R K 0 1 1 0 0 1 1 1 0 0 0 0 0 1 2 1 4 0 2 2 0 0 17 0 1958.9374 Q9UI09 Q9UI09 115 131 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes yes 2 8.4054E-07 148.68 By MS/MS 10 0 1 1 239990 239990 0 4594 2784 4772 11047 7872 7872 1 255090 0 FNVWDTAGQEK EVHPLVFHTNRGPIKFNVWDTAGQEKFGGL GPIKFNVWDTAGQEKFGGLRDGYYIQAQCA K F N E K F 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 0 0 11 0 1293.599 P62826 P62826 61 71 RAN GTP-binding nuclear protein Ran yes yes 2 0.013046 95.618 By MS/MS 9 0 1 1 2546900 2546900 0 4595 1146 4773 11048 7873 7873 1 1461700 0 FNVWDVGGQDK TVGFNVETVTYKNVKFNVWDVGGQDKIRPL KNVKFNVWDVGGQDKIRPLWRHYYTGTQGL K F N D K I 0 0 1 2 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 2 0 0 11 0 1263.5884 P62330 P62330 59 69 ARF6 ADP-ribosylation factor 6 yes yes 2 0.00019855 155 By MS/MS 9.5 0.5 1 1 2 1340500 1340500 0 4596 1132 4774 11049;11050 7874;7875 7875 2 1214200 0 FNYGFEYLGVQDK TDVLQQLSIQMANAKFNYGFEYLGVQDKLV AKFNYGFEYLGVQDKLVQTPLTDRCYLTMT K F N D K L 0 0 1 1 0 1 1 2 0 0 1 1 0 2 0 0 0 0 2 1 0 0 13 0 1578.7355 Q14204 Q14204 1866 1878 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 3.0748E-13 214.04 By MS/MS 2 0.816 1 1 1 3 574700 574700 0 4597 1421 4775 11051;11052;11053 7876;7877 7876 2 26132 0 FNYQGTK HAAYNLLFFASGGGKFNYQGTKRWLEDNLD FFASGGGKFNYQGTKRWLEDNLDHTDSSLL K F N T K R 0 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 1 0 0 0 7 0 856.40792 Q969V3 Q969V3 280 286 NCLN Nicalin yes yes 2 0.037937 111.04 By MS/MS 6 0 1 1 0 0 0 4598 2109 4776 11054 7878 7878 1 0 0 FPDENFTLK TNHNGTGGKSIYGSRFPDENFTLKHVGPGV SIYGSRFPDENFTLKHVGPGVLSMANAGPN R F P L K H 0 0 1 1 0 0 1 0 0 0 1 1 0 2 1 0 1 0 0 0 0 0 9 0 1109.5393 P30405 P30405 125 133 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 2 0.051637 81.296 By MS/MS 10 0 1 1 354700 354700 0 4599 740 4777 11055 7879 7879 1 377010 0 FPEEEAPSTVLSQNLFTPK LKNPILWNVADVVIKFPEEEAPSTVLSQNL EAPSTVLSQNLFTPKQEIQHLFREPEKRPP K F P P K Q 1 0 1 0 0 1 3 0 0 0 2 1 0 2 3 2 2 0 0 1 0 0 19 0 2133.063 P04844 P04844 505 523 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.0095441 78.615 By MS/MS 2 0.816 1 1 1 3 227330 227330 0 4600 459 4778 11056;11057;11058 7880 7880 1 9535.8 0 FPGQLNADLR HLVSATMSGVTTCLRFPGQLNADLRKLAVN TTCLRFPGQLNADLRKLAVNMVPFPRLHFF R F P L R K 1 1 1 1 0 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 10 0 1129.588 P07437;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q13885;Q9BVA1;P04350;Q13509;Q3ZCM7;Q9BUF5 P68371 242 251 TUBB;TUBB1;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 2 3.2703E-07 191.45 By MS/MS By MS/MS 6.89 1.66 1 2 2 3 1 7 2 399660000 399170000 493540 4601 1187;490;1400;2375;451;1377;2363;1572 4779 11059;11060;11061;11062;11063;11064;11065;11066;11067 7881;7882;7883;7884;7885;7886;7887;7888;7889;7890;7891;7892;7893;7894;7895;7896;7897 7886 17 3587000 1567100 FPGQLNADLRK HLVSATMSGVTTCLRFPGQLNADLRKLAVN TCLRFPGQLNADLRKLAVNMVPFPRLHFFM R F P R K L 1 1 1 1 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 11 1 1257.683 P07437;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q13885;Q9BVA1;P04350;Q13509;Q3ZCM7;Q9BUF5 P68371 242 252 TUBB;TUBB1;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 2;3 0.0013452 148.94 By MS/MS 6.4 1.02 1 2 1 1 5 41960000 41960000 0 4602 1187;490;1400;2375;451;1377;2363;1572 4780 11068;11069;11070;11071;11072 7898;7899;7900 7898 3 433010 0 FPHLAEAQK KENLERKKAKILLKKFPHLAEAQKSSLV__ KILLKKFPHLAEAQKSSLV___________ K F P Q K S 2 0 0 0 0 1 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 9 0 1039.5451 Q9HD33 Q9HD33 238 246 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 3 0.017765 101.54 By MS/MS 9 0 1 1 366710 366710 0 4603 2567 4781 11073 7901 7901 1 210460 0 FPLLKPSPK LEYNPEHVSRSIYVKFPLLKPSPKLASLID RSIYVKFPLLKPSPKLASLIDGSSPVSILV K F P P K L 0 0 0 0 0 0 0 0 0 0 2 2 0 1 3 1 0 0 0 0 0 0 9 1 1025.6274 Q9NSE4 Q9NSE4 273 281 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2;3 0.0075935 134.48 By MS/MS 4 0 2 2 1114300 1114300 0 4604 2624 4782 11074;11075 7902;7903 7902 2 30420 0 FPPVVFYTPK QTRIKIGLNSKMPSRFPPVVFYTPKELGGL KMPSRFPPVVFYTPKELGGLGMLSMGHVLI R F P P K E 0 0 0 0 0 0 0 0 0 0 0 1 0 2 3 0 1 0 1 2 0 0 10 0 1193.6485 Q6P2Q9 Q6P2Q9 1311 1320 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.050879 78.77 By MS/MS 2 0 1 1 57288 57288 0 4605 1706 4783 11076 7904 7904 1 2847.5 0 FPQLDSTSFANSR TTVGSAEKRAYLQARFPQLDSTSFANSRDT ARFPQLDSTSFANSRDTSFEQHVLWHTGGK R F P S R D 1 1 1 1 0 1 0 0 0 0 1 0 0 2 1 3 1 0 0 0 0 0 13 0 1468.6947 P49327 P49327 1712 1724 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.8758E-07 179.59 By MS/MS 2.83 1.34 1 2 1 1 1 6 32786000 32786000 0 4606 915 4784 11077;11078;11079;11080;11081;11082 7905;7906;7907;7908;7909;7910;7911;7912 7905 8 1350900 0 FPQVFNTR FVHNVMSIPHHIIVKFPQVFNTRLFKVKER PHHIIVKFPQVFNTRLFKVKERHLFLTYLG K F P T R L 0 1 1 0 0 1 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 8 0 1007.5189 Q96E29 Q96E29 351 358 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 0.023957 101.64 By MS/MS 7 0 1 1 2238800 2238800 0 4607 2158 4785 11083 7913 7913 1 40008 0 FPSSGPVTPQPTALTFAK ITKGTQSLPTASASKFPSSGPVTPQPTALT SGPVTPQPTALTFAKSSWARQESLQERKQA K F P A K S 2 0 0 0 0 1 0 1 0 0 1 1 0 2 4 2 3 0 0 1 0 0 18 0 1844.9672 Q9Y679 Q9Y679 360 377 AUP1 Ancient ubiquitous protein 1 yes yes 2 1.6274E-10 158.31 By MS/MS 7 0 1 1 1870200 1870200 0 4608 2997 4786 11084 7914;7915 7915 2 33421 0 FPYAYVTER KQEITLPPDGLWVLRFPYAYVTERGPCFPP GLWVLRFPYAYVTERGPCFPPKENVQLMSY R F P E R G 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 2 1 0 0 9 0 1144.5553 Q8ND04 Q8ND04 956 964 SMG8 Protein SMG8 yes yes 2 0.0089015 101.25 By MS/MS 3.5 0.5 1 1 2 558590 558590 0 4609 1956 4787 11085;11086 7916 7916 1 15061 0 FQAHQQQGNK DILAAGQDAHCQLLRFQAHQQQGNKAEKAG CQLLRFQAHQQQGNKAEKAGSKEQGPRQRK R F Q N K A 1 0 1 0 0 4 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 10 0 1184.5687 Q9HCU5 Q9HCU5 95 104 PREB Prolactin regulatory element-binding protein yes yes 2;3 1.3933E-05 175.38 By MS/MS 7 0 2 2 470270 470270 0 4610 2565 4788 11087;11088 7917;7918 7917 2 8403.7 0 FQASGLIVK GSNRLQELVDRVLERFQASGLIVKEWNSVK DRVLERFQASGLIVKEWNSVKLHATVMNTL R F Q V K E 1 0 0 0 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 9 0 961.55967 Q8N9N2 Q8N9N2 289 297 ASCC1 Activating signal cointegrator 1 complex subunit 1 yes yes 2 0.0081971 108.74 By MS/MS 7.5 0.5 1 1 2 1430300 1430300 0 4611 1937 4789 11089;11090 7919 7919 1 32592 0 FQASQGENLEGK HFRNPQRRIRRWLRRFQASQGENLEGKYLS LRRFQASQGENLEGKYLSFEAEEKLAEWVL R F Q G K Y 1 0 1 0 0 2 2 2 0 0 1 1 0 1 0 1 0 0 0 0 0 0 12 0 1306.6153 Q7Z3K3 Q7Z3K3 1010 1021 POGZ Pogo transposable element with ZNF domain yes yes 2 2.4079E-05 171.67 By MS/MS 2.5 0.5 1 1 2 662910 662910 0 4612 1785 4790 11091;11092 7920 7920 1 18496 0 FQDDNVEGDK LLSRFGGSDRLRQFKFQDDNVEGDKVSKKD LRQFKFQDDNVEGDKVSKKDEIELAMQQIC K F Q D K V 0 0 1 3 0 1 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 10 0 1165.4887 Q92621 Q92621 1733 1742 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0010208 121.9 By MS/MS 2 0 1 1 215660 215660 0 4613 2070 4791 11093 7921 7921 1 10719 0 FQDDNVEGDKVSK LLSRFGGSDRLRQFKFQDDNVEGDKVSKKD FKFQDDNVEGDKVSKKDEIELAMQQICANV K F Q S K K 0 0 1 3 0 1 1 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 13 1 1479.6842 Q92621 Q92621 1733 1745 NUP205 Nuclear pore complex protein Nup205 yes yes 2;3 0.0057974 120.57 By MS/MS 2 0 2 2 1284200 1284200 0 4614 2070 4792 11094;11095 7922;7923 7922 2 63830 0 FQDGDLTLYQSNTILR EGSLKASCLYGQLPKFQDGDLTLYQSNTIL QDGDLTLYQSNTILRHLGRTLGLYGKDQQE K F Q L R H 0 1 1 2 0 2 0 1 0 1 3 0 0 1 0 1 2 0 1 0 0 0 16 0 1882.9425 P09211 P09211 56 71 GSTP1 Glutathione S-transferase P yes yes 2 0.021609 83.243 By MS/MS 9 0 1 1 763850 763850 0 4615 513 4793 11096 7924 7924 1 438380 0 FQDLGAAYEVLSDSEK LHPDRNPDDPQAQEKFQDLGAAYEVLSDSE QDLGAAYEVLSDSEKRKQYDTYGEEGLKDG K F Q E K R 2 0 0 2 0 1 2 1 0 0 2 1 0 1 0 2 0 0 1 1 0 0 16 0 1770.8312 Q9UBS4 Q9UBS4 67 82 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2;3 5.9158E-06 172.43 By MS/MS 8.2 1.17 2 1 1 1 5 6899500 6899500 0 4616 2756 4794 11097;11098;11099;11100;11101 7925;7926 7925 2 206750 0 FQDLGAAYEVLSDSEKR LHPDRNPDDPQAQEKFQDLGAAYEVLSDSE DLGAAYEVLSDSEKRKQYDTYGEEGLKDGH K F Q K R K 2 1 0 2 0 1 2 1 0 0 2 1 0 1 0 2 0 0 1 1 0 0 17 1 1926.9323 Q9UBS4 Q9UBS4 67 83 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 4.4675E-13 206.49 By MS/MS 7 0 1 1 637450 637450 0 4617 2756 4795 11102 7927 7927 1 11391 0 FQDQVLDLLK PFSIALLLSVTRIQRFQDQVLDLLKTSVVK TRIQRFQDQVLDLLKTSVVKSFKDLQLLQG R F Q L K T 0 0 0 2 0 2 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 10 0 1217.6656 Q9NVI1 Q9NVI1 322 331 FANCI Fanconi anemia group I protein yes yes 2 1.1937E-10 205.18 By MS/MS 3.5 0.5 1 1 2 2927600 2927600 0 4618 2654 4796 11103;11104 7928;7929 7928 2 76673 0 FQDTDGKHLLPK ELDSFLIEITANILKFQDTDGKHLLPKIRD ILKFQDTDGKHLLPKIRDSAGQKGTGKWTA K F Q P K I 0 0 0 2 0 1 0 1 1 0 2 2 0 1 1 0 1 0 0 0 0 0 12 1 1397.7303 P52209 P52209 242 253 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 3 0.0084 87.641 By MS/MS 6.5 0.5 1 1 2 3898700 3898700 0 4619 981 4797 11105;11106 7930 7930 1 45410 0 FQEAKGDSPQEK PKRPRSAYNVYVAERFQEAKGDSPQEKLKT AERFQEAKGDSPQEKLKTVKENWKNLSDSE R F Q E K L 1 0 0 1 0 2 2 1 0 0 0 2 0 1 1 1 0 0 0 0 0 0 12 1 1362.6416 Q00059 Q00059 170 181 TFAM Transcription factor A, mitochondrial yes yes 2;3 0.00040978 164.81 By MS/MS By matching 9 0 4 2 2 2116400 2082000 34404 4620 1229 4798 11107;11108;11109;11110 7931;7932 7932 2 1194900 370780 FQEAKGDSPQEKLK PKRPRSAYNVYVAERFQEAKGDSPQEKLKT RFQEAKGDSPQEKLKTVKENWKNLSDSEKE R F Q L K T 1 0 0 1 0 2 2 1 0 0 1 3 0 1 1 1 0 0 0 0 0 0 14 2 1603.8206 Q00059 Q00059 170 183 TFAM Transcription factor A, mitochondrial yes yes 3 0.015399 80.746 By MS/MS 9 0 1 1 239990 239990 0 4621 1229 4799 11111 7933 7933 1 137730 0 FQEDIISIWNK FMVGEEICGAVVSVRFQEDIISIWNKTASD VSVRFQEDIISIWNKTASDQATTARIRDTL R F Q N K T 0 0 1 1 0 1 1 0 0 3 0 1 0 1 0 1 0 1 0 0 0 0 11 0 1391.7085 O60573 O60573 175 185 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 2 0.0006789 150.09 By MS/MS 8 0 1 1 443860 443860 0 4622 254 4800 11112 7934 7934 1 29282 0 FQEITGK VAVNKMDQVNWQQERFQEITGKLGHFLKQA QVNWQQERFQEITGKLGHFLKQAGFKESDV R F Q G K L 0 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 0 0 0 0 7 0 821.42832 Q9Y450 Q9Y450 418 424 HBS1L HBS1-like protein yes yes 2 0.0088055 157.33 By MS/MS 1.5 0.5 1 1 2 1381800 1381800 0 4623 2945 4801 11113;11114 7935 7935 1 68470 0 FQELKDVQDELR LSGGARSQAASILTKFQELKDVQDELRIKE LTKFQELKDVQDELRIKENELRALEEELAG K F Q L R I 0 1 0 2 0 2 2 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 12 1 1518.7678 O95347 O95347 678 689 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2;3 0.0018612 159.99 By MS/MS 3.33 0.471 2 1 3 5180700 5180700 0 4624 385 4802 11115;11116;11117 7936;7937 7937 2 135690 0 FQELLQDLEK AQELLGYQVDPRSARFQELLQDLEKKERKR PRSARFQELLQDLEKKERKRLKEEKQKRKK R F Q E K K 0 0 0 1 0 2 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 10 0 1261.6554 Q8TAE8 Q8TAE8 175 184 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.00083387 146.11 By MS/MS 9 0 1 1 1871200 1871200 0 4625 1980 4803 11118 7938 7938 1 1073900 0 FQELLQDLEKK AQELLGYQVDPRSARFQELLQDLEKKERKR RSARFQELLQDLEKKERKRLKEEKQKRKKE R F Q K K E 0 0 0 1 0 2 2 0 0 0 3 2 0 1 0 0 0 0 0 0 0 0 11 1 1389.7504 Q8TAE8 Q8TAE8 175 185 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2;3 6.9648E-05 163.84 By MS/MS 9 0 2 2 1782000 1782000 0 4626 1980 4804 11119;11120 7939;7940 7940 2 1022700 0 FQETSDEFEAAR PNMKAMEKLESVRDKFQETSDEFEAARKRA RDKFQETSDEFEAARKRAKKAKQAFEQIKK K F Q A R K 2 1 0 1 0 1 3 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 12 0 1428.6157 Q14683 Q14683 1038 1049 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00025776 149.94 By MS/MS 3 0 1 1 815440 815440 0 4627 1440 4805 11121 7941 7941 1 21287 0 FQGEDTVVIASKPYAFDR LNESEVNRGDKYIAKFQGEDTVVIASKPYA EDTVVIASKPYAFDRVFQSSTSQEQVYNDC K F Q D R V 2 1 0 2 0 1 1 1 0 1 0 1 0 2 1 1 1 0 1 2 0 0 18 1 2042.0109 P33176 P33176 33 50 KIF5B Kinesin-1 heavy chain yes yes 3 0.0057041 80.459 By MS/MS 4 0 1 1 1609500 1609500 0 4628 767 4806 11122 7942 7942 1 43937 0 FQIATVTEK CMRVLYYRDARSYNRFQIATVTEKGVEIEG ARSYNRFQIATVTEKGVEIEGPLSTETNWD R F Q E K G 1 0 0 0 0 1 1 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 9 0 1035.5601 P28070 P28070 232 240 PSMB4 Proteasome subunit beta type-4 yes yes 2 0.033214 99.973 By MS/MS 8.5 0.5 1 1 2 7365700 7365700 0 4629 713 4807 11123;11124 7943 7943 1 3830900 0 FQIEANFPR VIHDFLFSLKESPEKFQIEANFPRRVLPCI KESPEKFQIEANFPRRVLPCIPSEEWPNPP K F Q P R R 1 1 1 0 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 9 0 1120.5665 Q96CS3 Q96CS3 401 409 FAF2 FAS-associated factor 2 yes yes 2 0.0039402 134.77 By MS/MS 7 0.816 1 1 1 3 23695000 23695000 0 4630 2140 4808 11125;11126;11127 7944;7945 7944 2 207880 0 FQILDFTSPK RQIYEVEKAVHLLKKFQILDFTSPKQSVYL HLLKKFQILDFTSPKQSVYLDLTLDMALGK K F Q P K Q 0 0 0 1 0 1 0 0 0 1 1 1 0 2 1 1 1 0 0 0 0 0 10 0 1194.6285 Q9BYD6 Q9BYD6 109 118 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 0.00087016 137.46 By MS/MS 8 0 1 1 1195200 1195200 0 4631 2415 4809 11128 7946 7946 1 78845 0 FQLQHER VTRALISPFDVIKIRFQLQHERLSRSDPSA PFDVIKIRFQLQHERLSRSDPSAKYHGILQ R F Q E R L 0 1 0 0 0 2 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 956.48281 Q9HC21 Q9HC21 43 49 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2;3 0.042897 111.01 By MS/MS 8 0 2 2 2356100 2356100 0 4632 2556 4810 11129;11130 7947;7948 7948 2 155430 0 FQMAYSNLLR KKKISTVVSSKEVNKFQMAYSNLLRANMDG KEVNKFQMAYSNLLRANMDGLKKRDKKNKT K F Q L R A 1 1 1 0 0 1 0 0 0 0 2 0 1 1 0 1 0 0 1 0 0 0 10 0 1241.6227 P37108 P37108 79 88 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.037702 96.665 By MS/MS 10 0 1 1 164020 164020 0 4633 813 4811 11131 7949 7949 557 0 174330 0 FQMTQEVVCDECPNVK NCRQEMRTTQLGPGRFQMTQEVVCDECPNV QMTQEVVCDECPNVKLVNEERTLEVEIEPG R F Q V K L 0 0 1 1 2 2 2 0 0 0 0 1 1 1 1 0 1 0 0 3 0 0 16 0 1982.8536 Q9UBS4 Q9UBS4 185 200 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 3.1255E-63 293.76 By MS/MS 7 0 2 2 5480500 5480500 0 4634 2756 4812;4813 11132;11133 7950;7951 7951 1609 2 97937 0 FQNGDIDGVLQR LAKEESFGPIMVISKFQNGDIDGVLQRANS ISKFQNGDIDGVLQRANSTEYGLASGVFTR K F Q Q R A 0 1 1 2 0 2 0 2 0 1 1 0 0 1 0 0 0 0 0 1 0 0 12 0 1360.6735 Q3SY69 Q3SY69 836 847 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.0004409 172.21 By MS/MS 4.5 0.5 1 1 2 2691200 2691200 0 4635 1570 4814 11134;11135 7952 7952 1 76321 0 FQPASAPAEDCISSSTEPKPDPK TKATSKPMGGSAPAKFQPASAPAEDCISSS EDCISSSTEPKPDPKKAKAPGLSSKAKSAQ K F Q P K K 3 0 0 2 1 1 2 0 0 1 0 2 0 1 5 4 1 0 0 0 0 0 23 1 2458.1322 Q14008 Q14008 1103 1125 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.053436 40.381 By MS/MS 2.5 0.5 1 1 2 1624400 1624400 0 4636 1405 4815 11136;11137 7953 7953 1 69896 0 FQPFQDGSSGQR DGNVSFLPENSFPSRFQPFQDGSSGQRRLI PSRFQPFQDGSSGQRRLIALLMAFVCSLPR R F Q Q R R 0 1 0 1 0 3 0 2 0 0 0 0 0 2 1 2 0 0 0 0 0 0 12 0 1352.6109 Q96T76 Q96T76 701 712 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.020027 85.845 By MS/MS 4 0 1 1 1445600 1445600 0 4637 2261 4816 11138 7954 7954 1 39463 0 FQPQSPDFLDITNPK VQVESVNLQVATYSKFQPQSPDFLDITNPK FQPQSPDFLDITNPKAVLENALRNFACLTT K F Q P K A 0 0 1 2 0 2 0 0 0 1 1 1 0 2 3 1 1 0 0 0 0 0 15 0 1745.8625 Q92890 Q92890 125 139 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.00011987 135.91 By MS/MS 7.5 0.5 1 1 2 2717800 2717800 0 4638 2086 4817 11139;11140 7955;7956 7955 2 101320 0 FQQEKEELINKK DAKEQVSPLETTLEKFQQEKEELINKKNTS LEKFQQEKEELINKKNTSNKIAQDKLNDIK K F Q K K N 0 0 1 0 0 2 3 0 0 1 1 3 0 1 0 0 0 0 0 0 0 0 12 2 1532.8199 Q92878 Q92878 922 933 RAD50 DNA repair protein RAD50 yes yes 3 0.03821 72.731 By MS/MS 3.5 0.5 1 1 2 507750 507750 0 4639 2083 4818 11141;11142 7957 7957 1 13396 0 FQQQQGLR EVRFLRPEDPTRPSRFQQQQGLRHVVFTAE DPTRPSRFQQQQGLRHVVFTAETHNFPTGV R F Q L R H 0 1 0 0 0 4 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 1003.5199 O15067 O15067 295 302 PFAS Phosphoribosylformylglycinamidine synthase yes yes 2 0.0072883 128.57 By MS/MS 3 0 1 1 620010 620010 0 4640 145 4819 11143 7958 7958 1 16185 0 FQQVPTDALANK PPVDPNQEVPPGPPRFQQVPTDALANKLFG PPRFQQVPTDALANKLFGAPEPSTIARSLP R F Q N K L 2 0 1 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 12 0 1330.6881 Q6PKG0 Q6PKG0 742 753 LARP1 La-related protein 1 yes yes 2 0.00012872 187.42 By MS/MS 3 0 1 1 2189000 2189000 0 4641 1719 4820 11144 7959 7959 1 57145 0 FQSISTEFLALMK GSADIKHLLPVETQRFQSISTEFLALMKKV QRFQSISTEFLALMKKVSKSPLVMDVLNIQ R F Q M K K 1 0 0 0 0 1 1 0 0 1 2 1 1 2 0 2 1 0 0 0 0 0 13 0 1513.7851 Q14204 Q14204 1568 1580 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00015097 147.91 By MS/MS 1.5 0.5 1 1 2 173590 173590 0 4642 1421 4821 11145;11146 7960;7961;7962 7961 1102 3 8534.9 0 FQSIVIGCALEDQK SACSSEVPHGPVDQKFQSIVIGCALEDQKK KFQSIVIGCALEDQKKIKRRLETLLRNIEN K F Q Q K K 1 0 0 1 1 2 1 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 14 0 1606.8025 O95816 O95816 155 168 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 3.0284E-46 276.12 By MS/MS 8.5 0.5 1 1 2 1200800 1200800 0 4643 408 4822 11147;11148 7963 7963 1 538170 0 FQSLGVAFYR RLVTMQIWDTAGQERFQSLGVAFYRGADCC AGQERFQSLGVAFYRGADCCVLVFDVTAPN R F Q Y R G 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 1 0 0 1 1 0 0 10 0 1186.6135 P51149 P51149 70 79 RAB7A Ras-related protein Rab-7a yes yes 2 0.00053232 143.7 By MS/MS 9 0 1 1 333680 333680 0 4644 960 4823 11149 7964 7964 1 191500 0 FQTEIQTVNK IADTMVQIFKGLQERFQTEIQTVNKQFPCE GLQERFQTEIQTVNKQFPCEPFKFLEPTLR R F Q N K Q 0 0 1 0 0 2 1 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 10 0 1206.6245 P14868 P14868 321 330 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 1.2744E-15 218.94 By MS/MS By matching 5 2.35 1 2 1 3 1 12148000 12090000 58095 4645 594 4824 11150;11151;11152;11153 7965;7966 7966 2 127680 178170 FQTIDLSPFLFTR PGIGRAVAEMVLKGRFQTIDLSPFLFTRFY GRFQTIDLSPFLFTRFYLGEKIQENNII__ R F Q T R F 0 1 0 1 0 1 0 0 0 1 2 0 0 3 1 1 2 0 0 0 0 0 13 0 1583.8348 Q96CU9 Q96CU9 461 473 FOXRED1 FAD-dependent oxidoreductase domain-containing protein 1 yes yes 2 1.2872E-05 172.13 By MS/MS 6 0 1 1 1497500 1497500 0 4646 2142 4825 11154 7967 7967 1 11678 0 FQVDLVSENAGR DGLGRPLGPTPSQSRFQVDLVSENAGRAAA QSRFQVDLVSENAGRAAAAAAAAAAAAAAA R F Q G R A 1 1 1 1 0 1 1 1 0 0 1 0 0 1 0 1 0 0 0 2 0 0 12 0 1333.6626 P55011 P55011 81 92 SLC12A2 Solute carrier family 12 member 2 yes yes 2 0.00018128 153.54 By MS/MS 2 0.816 1 1 1 3 723120 723120 0 4647 1022 4826 11155;11156;11157 7968 7968 1 28302 0 FRDLSIEEYIR RLELGDVQALSLWQKFRDLSIEEYIRVYKR LWQKFRDLSIEEYIRVYKRLGVYFDEYSGE K F R I R V 0 2 0 1 0 0 2 0 0 2 1 0 0 1 0 1 0 0 1 0 0 0 11 1 1439.7409 Q5T160 Q5T160 244 254 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2;3 0.00053418 185.08 By MS/MS 6 0 2 2 2143200 2143200 0 4648 1624 4827 11158;11159 7969;7970 7970 2 16712 0 FREALGDAQQSVR SYYGNRAATLMMLGRFREALGDAQQSVRLD GRFREALGDAQQSVRLDDSFVRGHLREGKC R F R V R L 2 2 0 1 0 2 1 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 13 1 1475.7481 Q99615 Q99615 78 90 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2;3 0.00021327 166.24 By MS/MS 6 0 2 2 16021000 16021000 0 4649 2276 4828 11160;11161 7971;7972 7972 2 124930 0 FREGERPSLR KQEALIESLCEKLVKFREGERPSLRLQLLS EKLVKFREGERPSLRLQLLSNLFHGMDKNT K F R L R L 0 3 0 0 0 0 2 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 10 2 1245.6578 Q7L2H7 Q7L2H7 93 102 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 3 0.013806 92.239 By MS/MS 7.5 0.5 1 1 2 9152600 9152600 0 4650 1764 4829 11162;11163 7973 7973 1 265930 0 FRPDMEEEEAK MGSGSLAAMAVFEDKFRPDMEEEEAKNLVS FEDKFRPDMEEEEAKNLVSEAIAAGIFNDL K F R A K N 1 1 0 1 0 0 4 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 11 1 1379.6027 Q99436 Q99436 185 195 PSMB7 Proteasome subunit beta type-7 yes yes 2;3 0.0019144 152.54 By MS/MS 8.5 0.5 2 2 4 1440300 1440300 0 4651 2265 4830 11164;11165;11166;11167 7974;7975 7975 2 492360 0 FRPLNESEVNRGDK ______________________________ RFRPLNESEVNRGDKYIAKFQGEDTVVIAS R F R D K Y 0 2 2 1 0 0 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 14 2 1659.8329 P33176 P33176 15 28 KIF5B Kinesin-1 heavy chain yes yes 3 0.016846 79.885 By MS/MS 4 0 1 1 1208000 1208000 0 4652 767 4831 11168 7976 7976 1 32976 0 FRQDLMNIAGTTLSSK ALLSSAVDHGSDEVKFRQDLMNIAGTTLSS RQDLMNIAGTTLSSKLLTHHKDHFTKLAVE K F R S K L 1 1 1 1 0 1 0 1 0 1 2 1 1 1 0 2 2 0 0 0 0 0 16 1 1780.9142 P78371 P78371 155 170 CCT2 T-complex protein 1 subunit beta yes yes 2;3 3.6872E-05 184 By MS/MS 6 0 3 3 27412000 27412000 0 4653 1195 4832;4833 11169;11170;11171 7977;7978;7979 7978 945 2 213760 0 FRQHLLGTSPER RFVSLRDGFVCALLRFRQHLLGTSPERVVQ LLRFRQHLLGTSPERVVQHLCQRRVEPPEL R F R E R V 0 2 0 0 0 1 1 1 1 0 2 0 0 1 1 1 1 0 0 0 0 0 12 1 1439.7633 Q8WUY1 Q8WUY1 151 162 THEM6 Protein THEM6 yes yes 3 0.0222 74.698 By MS/MS 9 0 1 1 0 0 0 4654 2020 4834 11172 7980 7980 1 0 0 FSAEVLSSLR LLDHLFFHYEFQNQRFSAEVLSSLRQLNLA FQNQRFSAEVLSSLRQLNLAGVRMTPVKCT R F S L R Q 1 1 0 0 0 0 1 0 0 0 2 0 0 1 0 3 0 0 0 1 0 0 10 0 1107.5924 Q86UT6 Q86UT6 690 699 NLRX1 NLR family member X1 yes yes 2 8.3667E-07 191.45 By MS/MS 4 0 1 1 0 0 0 4655 1825 4835 11173 7981 7981 1 0 0 FSAHYDAVEAELK RIAEETILKSQVDKRFSAHYDAVEAELKSS KRFSAHYDAVEAELKSSTVGLVTLNDMKAR R F S L K S 3 0 0 1 0 0 2 0 1 0 1 1 0 1 0 1 0 0 1 1 0 0 13 0 1478.7042 Q9Y247;Q14320 Q9Y247 49 61 FAM50B;FAM50A Protein FAM50B;Protein FAM50A yes no 3 0.0090791 83.53 By MS/MS 7 0 1 1 985600 985600 0 4656 1429 4836 11174 7982 7982 1 17613 0 FSALQQAVPTESTDNR AASEAARPATSTLNRFSALQQAVPTESTDN SALQQAVPTESTDNRRVVQRSSLSRERGEK R F S N R R 2 1 1 1 0 2 1 0 0 0 1 0 0 1 1 2 2 0 0 1 0 0 16 0 1762.8486 Q04637 Q04637 1123 1138 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 8.5962E-15 205.87 By MS/MS 2.5 1.12 1 1 1 1 4 7325900 7325900 0 4657 1264 4837 11175;11176;11177;11178 7983;7984 7984 2 336120 0 FSALQQAVPTESTDNRR AASEAARPATSTLNRFSALQQAVPTESTDN ALQQAVPTESTDNRRVVQRSSLSRERGEKA R F S R R V 2 2 1 1 0 2 1 0 0 0 1 0 0 1 1 2 2 0 0 1 0 0 17 1 1918.9497 Q04637 Q04637 1123 1139 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 6.5346E-05 155.99 By MS/MS 2.89 1.66 2 3 1 1 1 1 9 33795000 33795000 0 4658 1264 4838 11179;11180;11181;11182;11183;11184;11185;11186;11187 7985;7986;7987;7988;7989;7990;7991;7992;7993;7994;7995 7985 11 1417900 0 FSAPVVPSSFNFGGPAPGMN AAHESKMIEKHGGYKFSAPVVPSSFNFGGP VPSSFNFGGPAPGMN_______________ K F S M N - 2 0 2 0 0 0 0 3 0 0 0 0 1 3 4 3 0 0 0 2 0 0 20 0 1978.9247 O95373 O95373 1019 1038 IPO7 Importin-7 yes yes 2 0.00066807 102.62 By MS/MS 4 0 1 1 238050 238050 0 4659 388 4839 11188 7996 7996 206 1 6498.4 0 FSASGELGNGNIK IGDAVVISCAKDGVKFSASGELGNGNIKLS VKFSASGELGNGNIKLSQTSNVDKEEEAVT K F S I K L 1 0 2 0 0 0 1 3 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1292.6361 P12004 P12004 169 181 PCNA Proliferating cell nuclear antigen yes yes 2 1.2351E-58 290.51 By MS/MS 8 0 1 1 4534800 4534800 0 4660 561 4840 11189 7997 7997 1 299160 0 FSASSGGGGSR ______________________________ GASRFSASSGGGGSRGAPQHYPKTAGNSEF R F S S R G 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 4 0 0 0 0 0 0 11 0 968.43117 P78344 P78344 13 23 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00030165 150.81 By MS/MS By matching 4.33 0.471 2 1 2 1 3955300 3946400 8861.9 4661 1192 4841 11190;11191;11192 7998 7998 1 111020 18518 FSCDVAEGK PHLKPAWVLDRALWRFSCDVAEGKYKEKGI DRALWRFSCDVAEGKYKEKGIPALIENDHH R F S G K Y 1 0 0 1 1 0 1 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1011.4331 P35573 P35573 257 265 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0005395 152.47 By MS/MS 3 0 1 1 507740 507740 0 4662 792 4842 11193 7999 7999 1 13255 0 FSCLLPDPR VDSGADKKFARKPPRFSCLLPDPRELIEIK ARKPPRFSCLLPDPRELIEIKNKKKLLITG R F S P R E 0 1 0 1 1 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1103.5434 Q92538 Q92538 683 691 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.002454 124.92 By MS/MS 2.5 0.5 1 1 2 785190 785190 0 4663 2055 4843 11194;11195 8000 8000 1 32614 0 FSDDKDGVLPVK LLEKYKQENTRTNVRFSDDKDGVLPVKTFL NVRFSDDKDGVLPVKTFLEYLEYEKDVLNI R F S V K T 0 0 0 3 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 12 1 1318.6769 Q9H2M9 Q9H2M9 700 711 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2;3 0.010749 111.63 By MS/MS 3.33 0.471 2 1 3 2086600 2086600 0 4664 2481 4844 11196;11197;11198 8001;8002 8002 2 54875 0 FSDFLGLYEK SLPLFRSKQFAVKRRFSDFLGLYEKLSEKH AVKRRFSDFLGLYEKLSEKHSQNGFIVPPP R F S E K L 0 0 0 1 0 0 1 1 0 0 2 1 0 2 0 1 0 0 1 0 0 0 10 0 1217.5968 Q13596 Q13596 187 196 SNX1 Sorting nexin-1 yes yes 2 0.0012389 119.75 By MS/MS 5 0 1 1 216960 216960 0 4665 1385 4845 11199 8003 8003 1 8918.1 0 FSDIQIR ALFNRLVPSVNGVRRFSDIQIRRLKRLGIE PSVNGVRRFSDIQIRRLKRLGIEKTDPTTL R F S I R R 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 7 0 877.46577 P11586 P11586 489 495 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.031543 113.89 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 19886000 19886000 0 4666 556 4846 11200;11201;11202;11203;11204;11205;11206;11207 8004 8004 1 397640 0 FSDQFPLPLK LHGFKNQVGDENWRRFSDQFPLPLKERLAA ENWRRFSDQFPLPLKERLAAFYGV______ R F S L K E 0 0 0 1 0 1 0 0 0 0 2 1 0 2 2 1 0 0 0 0 0 0 10 0 1190.6336 Q92973 Q92973 880 889 TNPO1 Transportin-1 yes yes 2 0.0059235 110.76 By MS/MS 4.5 0.5 1 1 2 357180 357180 0 4667 2093 4847 11208;11209 8005 8005 1 10876 0 FSDQFPLPLKER LHGFKNQVGDENWRRFSDQFPLPLKERLAA WRRFSDQFPLPLKERLAAFYGV________ R F S E R L 0 1 0 1 0 1 1 0 0 0 2 1 0 2 2 1 0 0 0 0 0 0 12 1 1475.7773 Q92973 Q92973 880 891 TNPO1 Transportin-1 yes yes 3 0.0054586 108.32 By MS/MS 4.5 0.5 1 1 2 937160 937160 0 4668 2093 4848 11210;11211 8006 8006 1 28550 0 FSDSYASVIK LLETCSIALVGKYTKFSDSYASVIKALEHS GKYTKFSDSYASVIKALEHSALAINHKLEI K F S I K A 1 0 0 1 0 0 0 0 0 1 0 1 0 1 0 3 0 0 1 1 0 0 10 0 1115.5499 P17812 P17812 310 319 CTPS1 CTP synthase 1 yes yes 2 0.00028855 153.24 By MS/MS 5 0 1 1 1973600 1973600 0 4669 615 4849 11212 8007 8007 1 81125 0 FSEAEQR FATVRELVSGGRSVRFSEAEQRCVSRGFTP VSGGRSVRFSEAEQRCVSRGFTPAQFQAAL R F S Q R C 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 7 0 865.393 P33993 P33993 677 683 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.013964 143.02 By MS/MS 6 0 1 1 1648500 1648500 0 4670 775 4850 11213 8008 8008 1 12855 0 FSEGEATLR MEESLLLFEAMRKGKFSEGEATLRMKLVME AMRKGKFSEGEATLRMKLVMEDGKMDPVAY K F S L R M 1 1 0 0 0 0 2 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 9 0 1008.4876 P47897 P47897 395 403 QARS Glutamine--tRNA ligase yes yes 2 0.00021473 163.15 By MS/MS 4.5 0.5 1 1 2 2596400 2596400 0 4671 896 4851 11214;11215 8009 8009 1 100870 0 FSEGTSADR CIIFMDEIDAIGGRRFSEGTSADREIQRTL AIGGRRFSEGTSADREIQRTLMELLNQMDG R F S D R E 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 9 0 968.41994 P62333 P62333 243 251 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.0011492 138.98 By MS/MS 7 0 1 1 852680 852680 0 4672 1133 4852 11216 8010 8010 1 15238 0 FSEGVLQSPSQDQEK KGDAHLRPTSLVQRRFSEGVLQSPSQDQEK FSEGVLQSPSQDQEKLGGSLAALPQGQGSQ R F S E K L 0 0 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 15 0 1677.7846 Q9C0C2 Q9C0C2 428 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 2.7652E-21 231.17 By MS/MS 2 0 1 1 192740 192740 0 4673 2433 4853 11217 8011 8011 1 9580.1 0 FSELTAEK IELIAIATGGRIVPRFSELTAEKLGFAGLV GGRIVPRFSELTAEKLGFAGLVQEISFGTT R F S E K L 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 923.46001 P48643 P48643 345 352 CCT5 T-complex protein 1 subunit epsilon yes yes 2 2.4788E-08 205.7 By MS/MS By MS/MS 6 1.87 1 1 1 2 1 1 1 7 1 10130000 9961800 168320 4674 909 4854 11218;11219;11220;11221;11222;11223;11224;11225 8012;8013;8014;8015;8016;8017;8018 8015 7 384130 516230 FSETHADPHNSR NDVYEWARDHRAHHKFSETHADPHNSRRGF HHKFSETHADPHNSRRGFFFSHVGWLLVRK K F S S R R 1 1 1 1 0 0 1 0 2 0 0 0 0 1 1 2 1 0 0 0 0 0 12 0 1396.612 O00767 O00767 163 174 SCD Acyl-CoA desaturase yes yes 2;3 0.0040391 131.09 By MS/MS 5.5 2.87 1 1 2 2 6 4858300 4858300 0 4675 109 4855 11226;11227;11228;11229;11230;11231 8019;8020;8021;8022 8021 4 162440 0 FSEVLKR AGVHIKLPNLGKHEKFSEVLKRLRLQKRGT PNLGKHEKFSEVLKRLRLQKRGTGGVDTAA K F S K R L 0 1 0 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 7 1 877.50215 P12277 P12277 308 314 CKB Creatine kinase B-type yes yes 2 0.025931 170.17 By MS/MS 7 0 1 1 5706700 5706700 0 4676 565 4856 11232 8023 8023 1 101980 0 FSEYLLECPSAEVR RFWFAHNVLFNVSNRFSEYLLECPSAEVRG RFSEYLLECPSAEVRGAFAKLIVFIAHFSL R F S V R G 1 1 0 0 1 0 3 0 0 0 2 0 0 1 1 2 0 0 1 1 0 0 14 0 1698.7923 Q93008;O00507 Q93008 2100 2113 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 2.3914E-12 207.88 By MS/MS 2 0.816 1 1 1 3 2511800 2511800 0 4677 2096 4857 11233;11234;11235 8024;8025;8026;8027 8025 4 94053 0 FSGCTLTDGTLK AIQRTTNFEGFLAKRFSGCTLTDGTLKKLE AKRFSGCTLTDGTLKKLESPPPSTNPFLED R F S L K K 0 0 0 1 1 0 0 2 0 0 2 1 0 1 0 1 3 0 0 0 0 0 12 0 1298.6177 Q5VIR6 Q5VIR6 362 373 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 1.4927E-16 221.5 By MS/MS 4 0 1 1 1061500 1061500 0 4678 1645 4858 11236 8028 8028 1 28977 0 FSGGYPALMDCMNK NTWYGEQDQAVHLWRFSGGYPALMDCMNKL RFSGGYPALMDCMNKLKNNKEYLEFRRERS R F S N K L 1 0 1 1 1 0 0 2 0 0 1 1 2 1 1 1 0 0 1 0 0 0 14 0 1589.6677 Q9BPW8 Q9BPW8 128 141 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 2.0513E-05 149.94 By MS/MS 8 0 1 1 1918900 1918900 0 4679 2301 4859 11237 8029 8029 1450;1451 1 126590 0 FSGKDPNSK WKDCLSIPYRLIFEKFSGKDPNSKDNSVGI RLIFEKFSGKDPNSKDNSVGIQLLGIVMAN K F S S K D 0 0 1 1 0 0 0 1 0 0 0 2 0 1 1 2 0 0 0 0 0 0 9 1 978.47706 P78527 P78527 2260 2268 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.013971 133.13 By MS/MS 1.5 0.5 1 1 2 977980 977980 0 4680 1197 4860 11238;11239 8030 8030 1 48255 0 FSGLPSNDEPILSFSPK ATKFNFFIHNLAQLRFSGLPSNDEPILSFS GLPSNDEPILSFSPKTYSFRQDGRIKEVSV R F S P K T 0 0 1 1 0 0 1 1 0 1 2 1 0 2 3 4 0 0 0 0 0 0 17 0 1833.9149 O00443 O00443 1398 1414 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 2 0.022477 77.776 By MS/MS 3 0 1 1 176240 176240 0 4681 96 4861 11240 8031 8031 1 4600.7 0 FSGSGSGTDFTLK LIYEVSSRFSGVPDRFSGSGSGTDFTLKIS DRFSGSGSGTDFTLKISRVEAEDVGVYYCM R F S L K I 0 0 0 1 0 0 0 3 0 0 1 1 0 2 0 3 2 0 0 0 0 0 13 0 1302.6092 A2NJV5;A0A0A0MRZ7;A0A075B6S2;A0A075B6S6;A0A075B6P5;A0A087WW87;P06310;P01615;P01614 A2NJV5 87 99 IGKV A18;IGKV2D-26;IGKV2D-29;IGKV2D-30;IGKV2D-28;IGKV2-40 Ig kappa chain V-II region RPMI 6410;Ig kappa chain V-II region FR;Ig kappa chain V-II region Cum yes no 2 7.8285E-35 261.35 By MS/MS By MS/MS 8.17 1.46 1 1 1 3 4 2 4 8 172200000 113380000 58824000 4682 2 4862 11241;11242;11243;11244;11245;11246;11247;11248;11249;11250;11251;11252 8032;8033;8034;8035;8036;8037;8038;8039;8040;8041;8042;8043;8044;8045;8046;8047 8047 16 62312000 627890000 FSGTTGQMSDLNK NLRNRYAGEVYGMIRFSGTTGQMSDLNKMM IRFSGTTGQMSDLNKMMVQDLHSALDRSHP R F S N K M 0 0 1 1 0 1 0 2 0 0 1 1 1 1 0 2 2 0 0 0 0 0 13 0 1384.6293 P42356 P42356 1159 1171 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.043867 67.214 By MS/MS By matching 1.67 0.471 1 2 1 2 203260 159110 44157 4683 850 4863 11253;11254;11255 8048 8048 1 7908.4 39813 FSGVPDR PGQSPQLLIYEVSSRFSGVPDRFSGSGSGT LIYEVSSRFSGVPDRFSGSGSGTDFTLKIS R F S D R F 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 0 7 0 776.3817 A2NJV5;A0A0A0MRZ7;A0A075B6S2;A0A0C4DH68;A0A075B6R9 A2NJV5 80 86 IGKV A18;IGKV2D-26;IGKV2D-29;IGKV2-24;IGKV2D-24 no no 2 0.047626 102.77 By MS/MS By matching 7.71 1.67 1 1 1 1 2 1 2 5 42458000 19879000 22580000 4684 2;1 4864 11256;11257;11258;11259;11260;11261;11262 8049 8049 1 11800000 234820000 FSGVPDRFSGSGSGTDFTLK PGQSPQLLIYEVSSRFSGVPDRFSGSGSGT DRFSGSGSGTDFTLKISRVEAEDVGVYYCM R F S L K I 0 1 0 2 0 0 0 4 0 0 1 1 0 3 1 4 2 0 0 1 0 0 20 1 2060.9803 A2NJV5;A0A0A0MRZ7;A0A075B6S2 A2NJV5 80 99 IGKV A18;IGKV2D-26;IGKV2D-29 yes no 2;3 1.8924E-11 182.35 By MS/MS By MS/MS 9 0.632 1 3 1 2 3 7988200 5069800 2918400 4685 2 4865 11263;11264;11265;11266;11267 8050;8051;8052;8053;8054 8053 5 2965400 31252000 FSGYGQLCER QCVTVERELEKVLHKFSGYGQLCERGLEEL KVLHKFSGYGQLCERGLEELIDYTGGLKHE K F S E R G 0 1 0 0 1 1 1 2 0 0 1 0 0 1 0 1 0 0 1 0 0 0 10 0 1215.5343 Q9H871 Q9H871 18 27 RMND5A Protein RMD5 homolog A yes yes 2 0.00053746 143.5 By MS/MS 7 0 1 1 1509500 1509500 0 4686 2523 4866 11268 8055 8055 1 26975 0 FSHDLKR NLSAFYDSELFRMNKFSHDLKRKMILQQF_ SELFRMNKFSHDLKRKMILQQF________ K F S K R K 0 1 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 7 1 901.477 P49736 P49736 891 897 MCM2 DNA replication licensing factor MCM2 yes yes 1 0.052543 81.381 By MS/MS 8.5 1.12 1 1 1 1 4 33607000 33607000 0 4687 928 4867 11269;11270;11271;11272 8056 8056 0 2895300 0 FSHGTMPLR FHYIKRLLETLFVHRFSHGTMPLRNIFKNC TLFVHRFSHGTMPLRNIFKNCTYYWGFAAW R F S L R N 0 1 0 0 0 0 0 1 1 0 1 0 1 1 1 1 1 0 0 0 0 0 9 0 1044.5175 Q9NZ01 Q9NZ01 151 159 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.010773 99.139 By MS/MS 2 0.816 1 1 1 3 454450 454450 0 4688 2703 4868 11273;11274;11275 8057 8057 1580 1 20679 0 FSHQASGFQCDLTTNNR VGVQKILNARCPLVRFSHQASGFQCDLTTN HQASGFQCDLTTNNRIALTSSELLYIYGAL R F S N R I 1 1 2 1 1 2 0 1 1 0 1 0 0 2 0 2 2 0 0 0 0 0 17 0 1981.8701 Q9NVV4 Q9NVV4 315 331 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 3 0.0061535 69.522 By MS/MS 6.5 0.5 1 1 2 3807300 3807300 0 4689 2663 4869 11276;11277 8058 8058 1 31811 0 FSHQGVQLIDFSPCER GIALWGGEKFKQIQRFSHQGVQLIDFSPCE SHQGVQLIDFSPCERYLVTFSPLMDTQDDP R F S E R Y 0 1 0 1 1 2 1 1 1 1 1 0 0 2 1 2 0 0 0 1 0 0 16 0 1918.8996 P55884 P55884 371 386 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 1.0102E-14 204.37 By MS/MS 4.71 1.03 1 2 2 2 7 11560000 11560000 0 4690 1040 4870 11278;11279;11280;11281;11282;11283;11284 8059;8060;8061 8060 3 290440 0 FSIQTMCPIEGEGNIAR GFTLIWKNVPKTQMKFSIQTMCPIEGEGNI IQTMCPIEGEGNIARFLFSLFGQKHNAVNA K F S A R F 1 1 1 0 1 1 2 2 0 3 0 0 1 1 1 1 1 0 0 0 0 0 17 0 1921.9026 Q13155 Q13155 199 215 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 4.1599E-25 220.37 By MS/MS 8 0.816 1 1 1 3 3521700 3521700 0 4691 1342 4871 11285;11286;11287 8062;8063 8063 1049 2 272060 0 FSIYPPIPGEESSLR AKQKVEQNAAPSHTKFSIYPPIPGEESSLR FSIYPPIPGEESSLRWAGKKFEEIPIAHIK K F S L R W 0 1 0 0 0 0 2 1 0 2 1 0 0 1 3 3 0 0 1 0 0 0 15 0 1690.8566 P82912 P82912 60 74 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2 7.8729E-06 150.46 By MS/MS 10 0 1 1 958920 958920 0 4692 1206 4872 11288 8064 8064 1 1019200 0 FSLCSDNLEGISEGPSNR VDENKLHGKPDKTLRFSLCSDNLEGISEGP CSDNLEGISEGPSNRSNSVSSLDLEGESVS R F S N R S 0 1 2 1 1 0 2 2 0 1 2 0 0 1 1 4 0 0 0 0 0 0 18 0 1980.8847 Q14C86 Q14C86 565 582 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 4.6627E-05 136.33 By MS/MS 2 0 1 1 320440 320440 0 4693 1455 4873 11289 8065;8066 8065 2 15927 0 FSLFAGGMLR TPGEHQICLHSNSTKFSLFAGGMLRVHLDI SNSTKFSLFAGGMLRVHLDIQVGEHANDYA K F S L R V 1 1 0 0 0 0 0 2 0 0 2 0 1 2 0 1 0 0 0 0 0 0 10 0 1097.5692 Q9BVK6 Q9BVK6 129 138 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2 0.024044 82.426 By MS/MS 9 0 1 1 83004 83004 0 4694 2379 4874 11290 8067 8067 1476 1 47637 0 FSLFSAAVR LRTAYLRAEDSEREKFSLFSAAVRESHEKE DSEREKFSLFSAAVRESHEKERTRAERTKN K F S V R E 2 1 0 0 0 0 0 0 0 0 1 0 0 2 0 2 0 0 0 1 0 0 9 0 996.53927 Q96ER9 Q96ER9 179 187 CCDC51 Coiled-coil domain-containing protein 51 yes yes 2 0.00011812 180.93 By MS/MS 7 0 1 1 347610 347610 0 4695 2166 4875 11291 8068 8068 1 6211.9 0 FSLIDLAGNER VFQIILRRKGKLHGKFSLIDLAGNERGADT LHGKFSLIDLAGNERGADTSSADRQTRLEG K F S E R G 1 1 1 1 0 0 1 1 0 1 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1233.6354 O00139 O00139 453 463 KIF2A Kinesin-like protein KIF2A yes yes 2 4.7897E-07 187.16 By MS/MS 4.5 0.5 1 1 2 1363600 1363600 0 4696 69 4876 11292;11293 8069;8070 8069 2 39710 0 FSLVDLAGNER CFQIILRAKGRMHGKFSLVDLAGNERGADT MHGKFSLVDLAGNERGADTSSADRQTRMEG K F S E R G 1 1 1 1 0 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1219.6197 Q99661;Q8N4N8 Q99661 488 498 KIF2C;KIF2B Kinesin-like protein KIF2C;Kinesin-like protein KIF2B yes no 2 1.058E-06 176.95 By MS/MS 5.5 0.5 1 1 2 866940 866940 0 4697 2282 4877 11294;11295 8071 8071 1 27904 0 FSLVNTVCDR VGIFGKTALRLNSEKFSLVNTVCDRQVFPL LNSEKFSLVNTVCDRQVFPLFRHQDPGDPG K F S D R Q 0 1 1 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 2 0 0 10 0 1209.5812 Q8ND04 Q8ND04 65 74 SMG8 Protein SMG8 yes yes 2 0.00093916 125.68 By MS/MS 4.5 0.5 1 1 2 930480 930480 0 4698 1956 4878 11296;11297 8072 8072 1 28763 0 FSMEILK GPPLVLRRILRRAVRFSMEILKAPPGFLGS RILRRAVRFSMEILKAPPGFLGSLVPVVVE R F S L K A 0 0 0 0 0 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 7 0 866.45718 Q5JTZ9 Q5JTZ9 360 366 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.019099 128.86 By MS/MS 4.5 0.5 1 1 2 735590 735590 0 4699 1611 4879 11298;11299 8073 8073 1 23424 0 FSMGFIDSIIAK FRKLVEHLHNFILFRFSMGFIDSIIAKYLA LFRFSMGFIDSIIAKYLATVVGYLVVSRPF R F S A K Y 1 0 0 1 0 0 0 1 0 3 0 1 1 2 0 2 0 0 0 0 0 0 12 0 1327.6846 P28288 P28288 311 322 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.0012465 123.96 By MS/MS 4.5 0.5 1 1 2 204130 204130 0 4700 716 4880 11300;11301 8074;8075 8074 493 2 7894 0 FSMGSVVAGLLK GDGFKVAMNILNSGRFSMGSVVAGLLKRLI SGRFSMGSVVAGLLKRLIEMTAEYACTRKQ R F S L K R 1 0 0 0 0 0 0 2 0 0 2 1 1 1 0 2 0 0 0 2 0 0 12 0 1207.6635 Q9H845 Q9H845 305 316 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2 1.7089E-16 219.8 By MS/MS 6 0 1 1 656350 656350 0 4701 2521 4881 11302 8076 8076 1 5118.3 0 FSMVVQDGIVK DDSLVSIFGNRRLKRFSMVVQDGIVKALNV RLKRFSMVVQDGIVKALNVEPDGTGLTCSL R F S V K A 0 0 0 1 0 1 0 1 0 1 0 1 1 1 0 1 0 0 0 3 0 0 11 0 1221.6427 P30044 P30044 181 191 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.00081522 131.09 By MS/MS 10 0 1 1 549750 549750 0 4702 730 4882 11303 8077 8077 498 1 584330 0 FSNISAAK GKGAYQDRDKPAQIRFSNISAAKAVADAIR DKPAQIRFSNISAAKAVADAIRTSLGPKGM R F S A K A 2 0 1 0 0 0 0 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 8 0 836.43922 P50991 P50991 35 42 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0030524 149.57 By MS/MS By MS/MS 5.4 2.84 1 1 1 1 1 2 1 1 1 9 1 124150000 123900000 252470 4703 956 4883 11304;11305;11306;11307;11308;11309;11310;11311;11312;11313 8078;8079;8080;8081;8082;8083;8084 8081 7 2054500 774290 FSNQETCVEIGESVR ADRLGLELGKVVTKKFSNQETCVEIGESVR FSNQETCVEIGESVRGEDVYIVQSGCGEIN K F S V R G 0 1 1 0 1 1 3 1 0 1 0 0 0 1 0 2 1 0 0 2 0 0 15 0 1753.7941 P60891 P60891 35 49 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes yes 2 3.4921E-50 284.92 By MS/MS 8 0 1 1 1089900 1089900 0 4704 1076 4884 11314 8085 8085 1 71903 0 FSNQETSVEIGESVR ADRLGLELGKVVTKKFSNQETSVEIGESVR FSNQETSVEIGESVRGEDVYIIQSGCGEIN K F S V R G 0 1 1 0 0 1 3 1 0 1 0 0 0 1 0 3 1 0 0 2 0 0 15 0 1680.7955 P11908 P11908 35 49 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes yes 2 1.0102E-20 225.72 By MS/MS 8 0 1 1 2383000 2383000 0 4705 559 4885 11315 8086 8086 1 157210 0 FSNSSSSNEFSK QSCSNGQHEYGSCGRFSNSSSSNEFSKCDQ CGRFSNSSSSNEFSKCDQYGSGSSQSTSFE R F S S K C 0 0 2 0 0 0 1 0 0 0 0 1 0 2 0 6 0 0 0 0 0 0 12 0 1319.563 CON__Q5D862;Q5D862 CON__Q5D862 404 415 FLG2 Filaggrin-2 yes no 2 8.8001E-11 196.24 By MS/MS By MS/MS 6 3.08 2 1 1 1 1 1 2 1 2 4 8 3487800 1217100 2270700 + 4706 60 4886 11316;11317;11318;11319;11320;11321;11322;11323;11324;11325;11326;11327 8087;8088;8089;8090;8091;8092;8093;8094;8095;8096 8096 10 447930 8881800 FSPAGPILSIR GDLHPDVTEAMLYEKFSPAGPILSIRVCRD LYEKFSPAGPILSIRVCRDMITRRSLGYAY K F S I R V 1 1 0 0 0 0 0 1 0 2 1 0 0 1 2 2 0 0 0 0 0 0 11 0 1156.6604 P11940;Q9H361;Q4VXU2 P11940 31 41 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 2 0.00093157 134.57 By MS/MS 5.5 0.5 1 1 2 3942300 3942300 0 4707 560 4887 11328;11329 8097 8097 1 156430 0 FSPDGELYASGSEDGTLR LESYKGHFGPIHCVRFSPDGELYASGSEDG DGELYASGSEDGTLRLWQTVVGKTYGLWKC R F S L R L 1 1 0 2 0 0 2 3 0 0 2 0 0 1 1 3 1 0 1 0 0 0 18 0 1899.8487 Q9Y3F4 Q9Y3F4 273 290 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 1.0243E-10 194.86 By MS/MS 7.5 0.5 1 1 2 1575300 1575300 0 4708 2937 4888 11330;11331 8098 8098 1 43104 0 FSPDLWGVSVCTVDGQR QSGGKVADYIPQLAKFSPDLWGVSVCTVDG PDLWGVSVCTVDGQRHSTGDTKVPFCLQSC K F S Q R H 0 1 0 2 1 1 0 2 0 0 1 0 0 1 1 2 1 1 0 3 0 0 17 0 1921.8992 O94925 O94925 256 272 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 2.3412E-18 199.8 By MS/MS 6 0 2 2 6702000 6702000 0 4709 359 4889 11332;11333 8099;8100 8099 2 52262 0 FSPGAPGGSGSQPNQK KFSPVTPKFTPVASKFSPGAPGGSGSQPNQ SPGAPGGSGSQPNQKLGHPEALSAGTGSPQ K F S Q K L 1 0 1 0 0 2 0 4 0 0 0 1 0 1 3 3 0 0 0 0 0 0 16 0 1514.7114 Q15942 Q15942 280 295 ZYX Zyxin yes yes 2 0.013103 86.699 By MS/MS 5 0 1 1 3030100 3030100 0 4710 1528 4890 11334 8101 8101 1 124550 0 FSPNSSNPIIVSCGWDK TVQDESHSEWVSCVRFSPNSSNPIIVSCGW PNSSNPIIVSCGWDKLVKVWNLANCKLKTN R F S D K L 0 0 2 1 1 0 0 1 0 2 0 1 0 1 2 4 0 1 0 1 0 0 17 0 1906.8883 P63244 P63244 156 172 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 5.3081E-07 152.11 By MS/MS 8 0 1 1 1361500 1361500 0 4711 1178 4891 11335 8102 8102 1 89820 0 FSPTDFLAK HYNALLKVYLQNEYKFSPTDFLAKMEEANI LQNEYKFSPTDFLAKMEEANIQPNRVTYQR K F S A K M 1 0 0 1 0 0 0 0 0 0 1 1 0 2 1 1 1 0 0 0 0 0 9 0 1024.5229 P42704 P42704 179 187 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.030852 90.601 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 20686000 20686000 0 4712 854 4892 11336;11337;11338;11339;11340;11341;11342;11343;11344 8103 8103 1 571540 0 FSPVATASYR LLMHCVKGIGKDHAKFSPVATASYRLLPDI KDHAKFSPVATASYRLLPDITLLEPVEGEA K F S Y R L 2 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 10 0 1097.5506 O15160 O15160 225 234 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.020174 92.239 By MS/MS 7 0 1 1 3088100 3088100 0 4713 155 4893 11345 8104 8104 1 55186 0 FSQFLETEYK FLRELAKVKQENKLKFSQFLETEYKVKINP ENKLKFSQFLETEYKVKINPSSMFDVQVKR K F S Y K V 0 0 0 0 0 1 2 0 0 0 1 1 0 2 0 1 1 0 1 0 0 0 10 0 1290.6132 P06737 P06737 546 555 PYGL Glycogen phosphorylase, liver form yes yes 2 1.9037E-08 195.36 By MS/MS 4 0 1 1 779520 779520 0 4714 483 4894 11346 8105 8105 1 21280 0 FSQGPTPAAAVPEGTAAEGAPR KREVRFERAEQALRRFSQGPTPAAAVPEGT AAAVPEGTAAEGAPRQENCGAQQVPAGPGT R F S P R Q 6 1 0 0 0 1 2 3 0 0 0 0 0 1 4 1 2 0 0 1 0 0 22 0 2081.0178 Q96G46 Q96G46 235 256 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 2 1.4897E-06 127.3 By MS/MS 5 0 1 1 549120 549120 0 4715 2177 4895 11347 8106 8106 1 22571 0 FSQLAEAYEVLSDEVK YHPDTNKDDPKAKEKFSQLAEAYEVLSDEV SQLAEAYEVLSDEVKRKQYDAYGSAGFDPG K F S V K R 2 0 0 1 0 1 3 0 0 0 2 1 0 1 0 2 0 0 1 2 0 0 16 0 1826.8938 Q96EY1 Q96EY1 135 150 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.0013017 138.55 By MS/MS 7 0 1 1 133430 133430 0 4716 2169 4896 11348 8107 8107 1 2384.3 0 FSSCGGGGGSFGAGGGFGSR TTSSSTRRSGGGGGRFSSCGGGGGSFGAGG GGGGSFGAGGGFGSRSLVNLGGSKSISISV R F S S R S 1 1 0 0 1 0 0 10 0 0 0 0 0 3 0 4 0 0 0 0 0 0 20 0 1764.7274 P04264;CON__P04264 P04264 46 65 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.3337E-31 220.25 By MS/MS By MS/MS 6.07 2.82 1 1 1 2 2 1 1 2 2 2 5 10 8766000 5517200 3248900 + 4717 450;45 4897 11349;11350;11351;11352;11353;11354;11355;11356;11357;11358;11359;11360;11361;11362;11363 8108;8109;8110;8111;8112;8113;8114;8115;8116;8117;8118;8119;8120;8121;8122;8123;8124;8125 8124 18 1113800 15752000 FSSSGGGGGGGR GGLGSGGSIRSSYSRFSSSGGGGGGGRFSS YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC R F S G R F 0 1 0 0 0 0 0 7 0 0 0 0 0 1 0 3 0 0 0 0 0 0 12 0 981.42642 P35527 P35527 35 46 KRT9 Keratin, type I cytoskeletal 9 yes yes 2 2.2665E-11 209.73 By MS/MS By MS/MS 5.09 2.83 2 3 2 4 3 1 1 2 2 2 9 13 42170000 18275000 23895000 + 4718 791 4898 11364;11365;11366;11367;11368;11369;11370;11371;11372;11373;11374;11375;11376;11377;11378;11379;11380;11381;11382;11383;11384;11385 8126;8127;8128;8129;8130;8131;8132;8133;8134;8135;8136;8137;8138;8139;8140;8141;8142;8143;8144;8145;8146;8147 8141 22 6223100 67575000 FSSSGGGGGGGRFSSSSGYGGGSSR GGLGSGGSIRSSYSRFSSSGGGGGGGRFSS GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 2 0 0 0 0 0 11 0 0 0 0 0 2 0 9 0 0 1 0 0 0 25 1 2197.9373 P35527 P35527 35 59 KRT9 Keratin, type I cytoskeletal 9 yes yes 3 0.0018294 45.679 By MS/MS By MS/MS 4.75 2.77 1 1 1 1 2 2 2 6 3028100 1010600 2017500 + 4719 791 4899 11386;11387;11388;11389;11390;11391;11392;11393 8148;8149;8150;8151 8150 4 251640 3828100 FSSSSGYGGGSSR YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 0 13 0 1234.5214 P35527;CON__P35527 P35527 47 59 KRT9 Keratin, type I cytoskeletal 9 yes no 2 2.7225E-25 240 By MS/MS By MS/MS 5.37 2.72 2 3 3 3 4 2 3 2 3 2 10 17 108460000 73184000 35277000 + 4720 791 4900 11394;11395;11396;11397;11398;11399;11400;11401;11402;11403;11404;11405;11406;11407;11408;11409;11410;11411;11412;11413;11414;11415;11416;11417;11418;11419;11420 8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163;8164;8165;8166;8167;8168;8169;8170;8171 8152 20 16870000 157530000 FSTETTFLVDKYEIL QVTKVTQVDGNSPVRFSTETTFLVDKYEIL FSTETTFLVDKYEIL_______________ R F S I L - 0 0 0 1 0 0 2 0 0 1 2 1 0 2 0 1 3 0 1 1 0 0 15 1 1804.9135 P48444 P48444 497 511 ARCN1 Coatomer subunit delta yes yes 2 0.0029261 112.84 By MS/MS 6 0 1 1 5872400 5872400 0 4721 903 4901 11421 8172 8172 1 45793 0 FSTFFDDAPVFR ELKVLVASATMDTARFSTFFDDAPVFRIPG TARFSTFFDDAPVFRIPGRRFPVDIFYTKA R F S F R I 1 1 0 2 0 0 0 0 0 0 0 0 0 4 1 1 1 0 0 1 0 0 12 0 1447.6772 O60231 O60231 560 571 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 2 0.00046789 140.07 By MS/MS 3.5 0.5 1 1 2 332440 332440 0 4722 237 4902 11422;11423 8173;8174 8174 2 8982.5 0 FSTIEEFSYIR SGLLANYTDPQSKLRFSTIEEFSYIRRLPS SKLRFSTIEEFSYIRRLPSDVVTGYLALRK R F S I R R 0 1 0 0 0 0 2 0 0 2 0 0 0 2 0 2 1 0 1 0 0 0 11 0 1390.6769 Q6PI98 Q6PI98 161 171 INO80C INO80 complex subunit C yes yes 2 0.019113 90.15 By MS/MS 9 0 1 1 78656 78656 0 4723 1716 4903 11424 8175 8175 1 45141 0 FSTSSLLLR FRPKDPYCHPVCANRFSTSSLLLRIRKRTR PVCANRFSTSSLLLRIRKRTRRQKGVLGTE R F S L R I 0 1 0 0 0 0 0 0 0 0 3 0 0 1 0 3 1 0 0 0 0 0 9 0 1022.576 Q9Y5Q8 Q9Y5Q8 79 87 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.041217 84.743 By MS/MS 5.5 0.5 1 1 2 2002300 2002300 0 4724 2977 4904 11425;11426 8176 8176 1 18703 0 FSVGGMTDVAEIK IARSIARALNREYFRFSVGGMTDVAEIKGH FRFSVGGMTDVAEIKGHRRTYVGAMPGKII R F S I K G 1 0 0 1 0 0 1 2 0 1 0 1 1 1 0 1 1 0 0 2 0 0 13 0 1352.6646 P36776 P36776 547 559 LONP1 Lon protease homolog, mitochondrial yes yes 2 9.5864E-08 187.42 By MS/MS 4 0 2 2 2026300 2026300 0 4725 809 4905;4906 11427;11428 8177;8178 8178 554 2 55317 0 FSVSPVVR TITTFEHAHNMRVMKFSVSPVVRVAVEAKN HNMRVMKFSVSPVVRVAVEAKNPADLPKLV K F S V R V 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 3 0 0 8 0 889.50215 P13639 P13639 499 506 EEF2 Elongation factor 2 yes yes 2 0.0094613 120.46 By MS/MS By matching 4 0 2 1 1 65469000 65411000 57195 4726 576 4907 11429;11430 8179 8179 1 1785700 119510 FSYLAVIEGAK RKFRMGLIQTADQLRFSYLAVIEGAKFIMG DQLRFSYLAVIEGAKFIMGDSSVQDQWKEL R F S A K F 2 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 0 0 1 1 0 0 11 0 1196.6441 P18031 P18031 269 279 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 2.6303E-07 190.96 By MS/MS 7.5 1.12 1 1 1 1 4 18344000 18344000 0 4727 620 4908 11431;11432;11433;11434 8180;8181;8182;8183 8180 4 217120 0 FTADEAR RLFCRYIDRIHIFFRFTADEARDLIQRYLT DRIHIFFRFTADEARDLIQRYLTEHPDPNN R F T A R D 2 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 7 0 808.37153 Q6P2Q9 Q6P2Q9 1101 1107 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.017299 133.81 By MS/MS 1.5 0.5 1 1 2 1740700 1740700 0 4728 1706 4909 11435;11436 8184;8185 8185 2 86378 0 FTAFYASR CTFALPSELERSYQRFTAFYASRHSGRKLT LERSYQRFTAFYASRHSGRKLTWLYQLSKG R F T S R H 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 1 0 0 0 8 0 961.46577 Q13616 Q13616 566 573 CUL1 Cullin-1 yes yes 2 0.0062402 136.27 By MS/MS 4.5 0.5 1 1 2 2179000 2179000 0 4729 1387 4910 11437;11438 8186;8187 8186 2 89566 0 FTAGDFSTTVIQNVNK GEVMREAAFSLAEAKFTAGDFSTTVIQNVN TAGDFSTTVIQNVNKAQVKIRAKKDNVAGV K F T N K A 1 0 2 1 0 1 0 1 0 1 0 1 0 2 0 1 3 0 0 2 0 0 16 0 1740.8683 Q9Y5K8 Q9Y5K8 74 89 ATP6V1D V-type proton ATPase subunit D yes yes 2 0.00024302 131.06 By MS/MS 8 0 1 1 323090 323090 0 4730 2973 4911 11439 8188 8188 1 21314 0 FTAILYR AEEKRHQKDEAQKEKFTAILYRTLERRRLA KDEAQKEKFTAILYRTLERRRLADDYQQKR K F T Y R T 1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 7 0 882.49634 Q8IWC1 Q8IWC1 142 148 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.017424 133.47 By MS/MS 3 0 1 1 536740 536740 0 4731 1864 4912 11440 8189 8189 1 14012 0 FTASIQR KLRHSEREMRNTLEKFTASIQRLIEQEEYL EMRNTLEKFTASIQRLIEQEEYLNVQVKEL K F T Q R L 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 7 0 821.43955 Q9NTJ3 Q9NTJ3 821 827 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.034785 111.65 By MS/MS 3 0 1 1 928020 928020 0 4732 2630 4913 11441 8190 8190 1 24226 0 FTDEEVDELYR QEDYLRELLTTMGDRFTDEEVDELYREAPI MGDRFTDEEVDELYREAPIDKKGNFNYIEF R F T Y R E 0 1 0 2 0 0 3 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 11 0 1414.6252 P19105;O14950 P19105 133 143 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2 6.4838E-22 235.66 By MS/MS 9.5 0.5 1 1 2 708900 708900 0 4733 136 4914 11442;11443 8191 8191 1 493500 0 FTDELMEQGLTYK WTLELSPELASMTTRFTDELMEQGLTYKVL TRFTDELMEQGLTYKVLTLVSQIDVNNEFE R F T Y K V 0 0 0 1 0 1 2 1 0 0 2 1 1 1 0 0 2 0 1 0 0 0 13 0 1573.7334 Q92621 Q92621 173 185 NUP205 Nuclear pore complex protein Nup205 yes yes 2 1.4434E-18 231.17 By MS/MS 2.33 0.471 2 1 3 654040 654040 0 4734 2070 4915;4916 11444;11445;11446 8192;8193 8192 1358 2 30095 0 FTDEYQLFEELGK ______________________________ TRFTDEYQLFEELGKGAFSVVRRCMKIPTG R F T G K G 0 0 0 1 0 1 3 1 0 0 2 1 0 2 0 0 1 0 1 0 0 0 13 0 1617.7563 Q13557 Q13557 10 22 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 2 6.26E-60 307.55 By MS/MS 6 0 1 1 1642400 1642400 0 4735 1381 4917 11447 8194;8195 8194 2 12808 0 FTDILVR LKKRLQLPVWEYKDRFTDILVRHQSFVLVG PVWEYKDRFTDILVRHQSFVLVGETGSGKT R F T V R H 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 7 0 862.49125 O43143 O43143 146 152 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 0.020742 124.34 By MS/MS 4 0 1 1 240990 240990 0 4736 181 4918 11448 8196 8196 1 6578.8 0 FTDLFEK TLVKSTPVNVPISQKFTDLFEKMVPVSVQQ VNVPISQKFTDLFEKMVPVSVQQSLAAYNQ K F T E K M 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 0 1 0 0 0 0 0 7 0 898.44363 Q8WUM4 Q8WUM4 351 357 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.023559 126.28 By MS/MS 4 0 1 1 452210 452210 0 4737 2019 4919 11449 8197 8197 1 12345 0 FTDTRKDEQER CKAGIIASARAGETRFTDTRKDEQERCITI GETRFTDTRKDEQERCITIKSTAISLFYEL R F T E R C 0 2 0 2 0 1 2 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 11 2 1423.6692 P13639 P13639 56 66 EEF2 Elongation factor 2 yes yes 2;3;4 0.00067379 140.17 By MS/MS 6.62 2.12 2 1 1 1 1 1 1 8 10814000 10814000 0 4738 576 4920 11450;11451;11452;11453;11454;11455;11456;11457 8198;8199;8200 8199 3 524340 0 FTEDSLLR KIETTVPPSGLNLNRFTEDSLLRHAQFVVE SGLNLNRFTEDSLLRHAQFVVEQVESYDEA R F T L R H 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 8 0 979.49746 P26358 P26358 545 552 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0039335 143 By MS/MS 3.5 1.12 1 1 1 1 4 1731800 1731800 0 4739 693 4921 11458;11459;11460;11461 8201;8202;8203 8203 3 60033 0 FTEYETQVK KDLKTGHSKGFGFVRFTEYETQVKVMSQRH GFGFVRFTEYETQVKVMSQRHMIDGRWCDC R F T V K V 0 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 2 0 1 1 0 0 9 0 1143.5448 Q13148 Q13148 152 160 TARDBP TAR DNA-binding protein 43 yes yes 2 7.4611E-12 229.44 By MS/MS 8 0.816 1 1 1 3 17563000 17563000 0 4740 1340 4922 11462;11463;11464 8204 8204 1 433380 0 FTGATIFEEYAR ACAGTLILEFAALSRFTGATIFEEYARKAL LSRFTGATIFEEYARKALDFLWEKRQRSSN R F T A R K 2 1 0 0 0 0 2 1 0 1 0 0 0 2 0 0 2 0 1 0 0 0 12 0 1403.6721 Q9BZQ6 Q9BZQ6 242 253 EDEM3 ER degradation-enhancing alpha-mannosidase-like protein 3 yes yes 2 1.2428E-05 211.86 By MS/MS 4 0 1 1 397840 397840 0 4741 2426 4923 11465 8205 8205 1 10860 0 FTGLESIFR LVCEVDLGDLSPEGRFTGLESIFRAVNYMY LSPEGRFTGLESIFRAVNYMYMGKNTGKIV R F T F R A 0 1 0 0 0 0 1 1 0 1 1 0 0 2 0 1 1 0 0 0 0 0 9 0 1068.5604 Q8N4Q0 Q8N4Q0 343 351 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 2 3.6305E-08 205.36 By MS/MS 7.5 0.5 1 1 2 1611700 1611700 0 4742 1915 4924 11466;11467 8206;8207 8206 2 34646 0 FTGLSKEELLK IKVAEDEAEAAAAAKFTGLSKEELLKVAGS AAAKFTGLSKEELLKVAGSPGWVRTRWALL K F T L K V 0 0 0 0 0 0 2 1 0 0 3 2 0 1 0 1 1 0 0 0 0 0 11 1 1263.7075 P08195 P08195 161 171 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0025728 148.91 By MS/MS 4.5 0.5 1 1 2 6002000 6002000 0 4743 499 4925 11468;11469 8208;8209;8210 8208 3 220510 0 FTHESQR LRFEPVRGLEAICAKFTHESQRQENHFVEG GLEAICAKFTHESQRQENHFVEGLLYSLDE K F T Q R Q 0 1 0 0 0 1 1 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 7 0 903.41988 Q15392 Q15392 255 261 DHCR24 Delta(24)-sterol reductase yes yes 2 0.039861 104.75 By MS/MS 6 1.87 1 1 1 1 4 2354700 2354700 0 4744 1497 4926 11470;11471;11472;11473 8211;8212 8211 2 22557 0 FTHVDHINFMK HLSSRSLVNIVKMFRFTHVDHINFMKQIGE KMFRFTHVDHINFMKQIGEIAPQRIPSLGV R F T M K Q 0 0 1 1 0 0 0 0 2 1 0 1 1 2 0 0 1 0 0 1 0 0 11 0 1387.6707 Q7L8L6 Q7L8L6 365 375 FASTKD5 FAST kinase domain-containing protein 5 yes yes 3 0.035842 68.626 By MS/MS 5 0 1 1 617420 617420 0 4745 1770 4927 11474 8213 8213 1257 0 25379 0 FTISDHPQPIDPLLK SGSSYARSSVVTAVKFTISDHPQPIDPLLK FTISDHPQPIDPLLKNCIGDFLKTLEDPDL K F T L K N 0 0 0 2 0 1 0 0 1 2 2 1 0 1 3 1 1 0 0 0 0 0 15 0 1719.9196 Q86VP6 Q86VP6 991 1005 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 3 0.0071122 88.163 By MS/MS 3.5 0.5 1 1 2 3742100 3742100 0 4746 1829 4928 11475;11476 8214 8214 1 100540 0 FTKLNESTFDTQITK FSTIVVDAIDVLKSRFTKLNESTFDTQITK FTKLNESTFDTQITKKMGYYKILDVMYSRL R F T T K K 0 0 1 1 0 1 1 0 0 1 1 2 0 2 0 1 4 0 0 0 0 0 15 1 1771.8992 P78527 P78527 1855 1869 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.031852 55.011 By MS/MS 1.5 0.5 1 1 2 258570 258570 0 4747 1197 4929 11477;11478 8215 8215 1 12697 0 FTLLPPTSPGDTAPK LKFISGHTSELGDFRFTLLPPTSPGDTAPK FTLLPPTSPGDTAPKYGSYNVFWTSNPGLP R F T P K Y 1 0 0 1 0 0 0 1 0 0 2 1 0 1 4 1 3 0 0 0 0 0 15 0 1540.8137 Q13724 Q13724 242 256 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 0.0010409 118.77 By MS/MS 4.5 0.5 1 1 2 986250 986250 0 4748 1396 4930 11479;11480 8216 8216 1 39159 0 FTLLTVSSGITEMK SIQLERDAYVQALARFTLLTVSSGITEMKQ RFTLLTVSSGITEMKQKNIDTIKTLITVAH R F T M K Q 0 0 0 0 0 0 1 1 0 1 2 1 1 1 0 2 3 0 0 1 0 0 14 0 1525.8062 Q9Y6D6 Q9Y6D6 1006 1019 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.0038111 101.56 By MS/MS 2 0 1 1 115680 115680 0 4749 3003 4931 11481 8217 8217 1732 1 5749.9 0 FTMEVPK TLVHAVSVLALWCNRFTMEVPKKLTEWFKK VLALWCNRFTMEVPKKLTEWFKKAFSLKTS R F T P K K 0 0 0 0 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 1 0 0 7 0 850.42588 Q92616 Q92616 417 423 GCN1L1 Translational activator GCN1 yes yes 2 0.028088 107.32 By MS/MS 2 0 1 1 92886 92886 0 4750 2068 4932 11482 8218 8218 1344 1 4616.9 0 FTPVDESVTFIGR DWQSMYQSTHIPIPKFTPVDESVTFIGRLC PKFTPVDESVTFIGRLCREILRITDPKMTC K F T G R L 0 1 0 1 0 0 1 1 0 1 0 0 0 2 1 1 2 0 0 2 0 0 13 0 1466.7405 Q12768 Q12768 811 823 KIAA0196 WASH complex subunit strumpellin yes yes 2 6.254E-08 190.26 By MS/MS 3.5 0.5 1 1 2 429630 429630 0 4751 1303 4933 11483;11484 8219 8219 1 11671 0 FTQAGSEVSALLGR QEGQDVLLFIDNIFRFTQAGSEVSALLGRI RFTQAGSEVSALLGRIPSAVGYQPTLATDM R F T G R I 2 1 0 0 0 1 1 2 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1434.7467 P06576 P06576 311 324 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 1.2746E-12 210.93 By MS/MS By MS/MS 7.2 1.17 2 1 1 1 4 1 248480000 248420000 52650 4752 478 4934 11485;11486;11487;11488;11489 8220;8221;8222;8223 8223 4 2242700 161470 FTQDTQPHYIYSPR LTAAMVEFYTMSQERFTQDTQPHYIYSPRE RFTQDTQPHYIYSPREMTRWVRGIFEALRP R F T P R E 0 1 0 1 0 2 0 0 1 1 0 0 0 1 2 1 2 0 2 0 0 0 14 0 1751.8267 Q14204 Q14204 2784 2797 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0059138 125.03 By MS/MS 1.75 0.829 2 1 1 4 2383200 2383200 0 4753 1421 4935 11490;11491;11492;11493 8224;8225 8225 2 111820 0 FTQLDLEDVQVR KLNKITKFIEENKEKFTQLDLEDVQVREKL KEKFTQLDLEDVQVREKLKHATSKAKKLEK K F T V R E 0 1 0 2 0 2 1 0 0 0 2 0 0 1 0 0 1 0 0 2 0 0 12 0 1461.7464 Q9NTJ3 Q9NTJ3 390 401 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 4.5719E-56 293.88 By MS/MS 2.67 1.25 1 1 1 3 5520000 5520000 0 4754 2630 4936 11494;11495;11496 8226;8227 8227 2 145440 0 FTQQDIDEAK LQSFGKAVDWAKSGKFTQQDIDEAKLSVFS AKSGKFTQQDIDEAKLSVFSTVDAPVAPSD K F T A K L 1 0 0 2 0 2 1 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 10 0 1193.5564 Q5JRX3 Q5JRX3 947 956 PITRM1 Presequence protease, mitochondrial yes yes 2 9.9304E-11 206.73 By MS/MS 4 0 1 1 1658300 1658300 0 4755 1606 4937 11497 8228 8228 1 45269 0 FTQSSQK ASVHDMDYVNPRGVRFTQSSQKEGTALVPY YVNPRGVRFTQSSQKEGTALVPYGLPCIRE R F T Q K E 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 7 0 824.40283 Q92538 Q92538 385 391 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.02098 123.69 By MS/MS 2 0 1 1 354370 354370 0 4756 2055 4938 11498 8229 8229 1 17614 0 FTREDPTFK SNKNDLEKFSKGIGRFTREDPTFKVYFDTE SKGIGRFTREDPTFKVYFDTENKETVISGM R F T F K V 0 1 0 1 0 0 1 0 0 0 0 1 0 2 1 0 2 0 0 0 0 0 9 1 1139.5611 Q96RP9 Q96RP9 473 481 GFM1 Elongation factor G, mitochondrial yes yes 3 0.013696 101.46 By MS/MS 6 0.816 1 1 1 3 3997800 3997800 0 4757 2247 4939 11499;11500;11501 8230 8230 1 110970 0 FTRNEFNLESK LIGDSGVGKSNLLSRFTRNEFNLESKSTIG LLSRFTRNEFNLESKSTIGVEFATRSIQVD R F T S K S 0 1 2 0 0 0 2 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 11 1 1383.6783 P62491;Q15907 P62491 31 41 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2;3 0.0017782 127.87 By MS/MS 9 0 2 2 1511400 1511400 0 4758 1136 4940 11502;11503 8231;8232 8231 2 867420 0 FTSSSDIPVEFIR AGIMLLLRSIRLTSKFTSSSDIPVEFIRRN SKFTSSSDIPVEFIRRNVKLRGRLRRITEN K F T I R R 0 1 0 1 0 0 1 0 0 2 0 0 0 2 1 3 1 0 0 1 0 0 13 0 1496.7511 Q6P1S2 Q6P1S2 62 74 C3orf33 Protein C3orf33 yes yes 2 0.0028436 115.18 By MS/MS 7.5 0.5 1 1 2 1242600 1242600 0 4759 1705 4941 11504;11505 8233 8233 1 73638 0 FTTEEEVDYTVEK DEDLAHSSIRFGIGRFTTEEEVDYTVEKCI GRFTTEEEVDYTVEKCIQHVKRLREMSPLW R F T E K C 0 0 0 1 0 0 4 0 0 0 0 1 0 1 0 0 3 0 1 2 0 0 13 0 1588.7144 Q9Y697 Q9Y697 413 425 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 4.254E-05 179.19 By MS/MS 7 0 1 1 1226800 1226800 0 4760 2998 4942 11506 8234 8234 1 21923 0 FTVAELK EAPKLSKKKLRRMNRFTVAELKQLVARPDV KKLRRMNRFTVAELKQLVARPDVVEMHDVT R F T L K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 7 0 806.4538 Q13435 Q13435 460 466 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.022143 120.49 By MS/MS 3 0 1 1 1225100 1225100 0 4761 1369 4943 11507 8235 8235 1 31981 0 FTVDQTQTPSLK RESFPNDLQFNILMRFTVDQTQTPSLKVKV LMRFTVDQTQTPSLKVKVAILKYIETLAKQ R F T L K V 0 0 0 1 0 2 0 0 0 0 1 1 0 1 1 1 3 0 0 1 0 0 12 0 1363.6983 O75122 O75122 780 791 CLASP2 CLIP-associating protein 2 yes yes 2 3.481E-69 353.5 By MS/MS 3 0 1 1 2103600 2103600 0 4762 279 4944 11508 8236 8236 1 54914 0 FTVETASR RNGYGAKLCNIFSTKFTVETASREYKKMFK CNIFSTKFTVETASREYKKMFKQTWMDNMG K F T S R E 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 8 0 909.4556 P11388 P11388 177 184 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0075842 127.46 By MS/MS 4 0.816 1 1 1 3 4319600 4319600 0 4763 553 4945 11509;11510;11511 8237 8237 1 121910 0 FTVLFPSGTPLPAR RDILVKGVDESGASRFTVLFPSGTPLPARR RFTVLFPSGTPLPARRQHTLQAPGSISSVC R F T A R R 1 1 0 0 0 0 0 1 0 0 2 0 0 2 3 1 2 0 0 1 0 0 14 0 1501.8293 Q0VDF9 Q0VDF9 412 425 HSPA14 Heat shock 70 kDa protein 14 yes yes 2 0.013383 89.356 By MS/MS 6 0 1 1 1191000 1191000 0 4764 1298 4946 11512 8238 8238 1 9287.1 0 FTYYTILDIFR GLLGWGYYLIMLPFRFTYYTILDIFRFALR LPFRFTYYTILDIFRFALRFIRPDPRSRVT R F T F R F 0 1 0 1 0 0 0 0 0 2 1 0 0 2 0 0 2 0 2 0 0 0 11 0 1450.7497 Q96CS3 Q96CS3 105 115 FAF2 FAS-associated factor 2 yes yes 2 0.00038541 147.4 By MS/MS 6 0 1 1 67772 67772 0 4765 2140 4947 11513 8239 8239 1 528.48 0 FVAFSGEGQSLR RPLVKKVEEDEAGGRFVAFSGEGQSLRKKG GGRFVAFSGEGQSLRKKGRKP_________ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 2.8451E-07 187.16 By MS/MS 7.5 0.5 1 1 2 4257500 4257500 0 4766 2086 4948 11514;11515 8240 8240 1 160220 0 FVAGALGPTNK RKAAEEVTLQTGIKRFVAGALGPTNKTLSV GIKRFVAGALGPTNKTLSVSPSVERPDYRN R F V N K T 2 0 1 0 0 0 0 2 0 0 1 1 0 1 1 0 1 0 0 1 0 0 11 0 1073.5869 Q99707 Q99707 141 151 MTR Methionine synthase yes yes 2 0.0025115 118.18 By MS/MS 3 0 1 1 2339200 2339200 0 4767 2284 4949 11516 8241 8241 1 61065 0 FVAGVGANSK RMTLKQLKDRYPRKRFVAGVGANSKISALK YPRKRFVAGVGANSKISALKGSKGKDCEIP R F V S K I 2 0 1 0 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 10 0 948.50288 A4D1E9 A4D1E9 67 76 GTPBP10 GTP-binding protein 10 yes yes 2 0.001043 120.87 By MS/MS 5.5 1.12 1 1 1 1 4 5568600 5568600 0 4768 14 4950 11517;11518;11519;11520 8242 8242 1 98640 0 FVALENISCK HAYIRKLTGGADKGKFVALENISCKIKSGC ADKGKFVALENISCKIKSGCEGHLPWPNGI K F V C K I 1 0 1 0 1 0 1 0 0 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1179.5958 Q8TAT6 Q8TAT6 180 189 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 0.00029549 152.97 By MS/MS 5 0 1 1 1450600 1450600 0 4769 1984 4951 11521 8243 8243 1 59625 0 FVAPEEVLPFTEGDILEK KLSPQFPNEEDSFHKFVAPEEVLPFTEGDI PEEVLPFTEGDILEKVSVHCPVFDYVPPEL K F V E K V 1 0 0 1 0 0 4 1 0 1 2 1 0 2 2 0 1 0 0 2 0 0 18 0 2032.0405 P49770 P49770 288 305 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 2 0.024612 71.879 By MS/MS 7 0 1 1 153990 153990 0 4770 932 4952 11522 8244 8244 1 2751.9 0 FVASCGFTPDVK NQMNNTHAAVSPCGRFVASCGFTPDVKVWE CGRFVASCGFTPDVKVWEVCFGKKGEFQEV R F V V K V 1 0 0 1 1 0 0 1 0 0 0 1 0 2 1 1 1 0 0 2 0 0 12 0 1326.6278 Q9Y4P3 Q9Y4P3 243 254 TBL2 Transducin beta-like protein 2 yes yes 2 6.3333E-11 201.33 By MS/MS 7.5 0.5 1 1 2 3081700 3081700 0 4771 2957 4953 11523;11524 8245 8245 1 64010 0 FVCEGTVEEK RIYRVGQQKDVVIHRFVCEGTVEEKILQLQ VVIHRFVCEGTVEEKILQLQEKKKDLAKQV R F V E K I 0 0 0 0 1 0 3 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1196.5383 Q9UNY4 Q9UNY4 1116 1125 TTF2 Transcription termination factor 2 yes yes 2 1.2712E-05 175.51 By MS/MS 3.5 0.5 1 1 2 1630800 1630800 0 4772 2848 4954 11525;11526 8246 8246 1 42795 0 FVDGVSTVAR KEGMFNNANVLFKTKFVDGVSTVARFTQCQ LFKTKFVDGVSTVARFTQCQNGKISKEAKS K F V A R F 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 3 0 0 10 0 1049.5506 O95347 O95347 1161 1170 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 9.6219E-05 166.07 By MS/MS 3 0.816 1 1 1 3 4006800 4006800 0 4773 385 4955 11527;11528;11529 8247 8247 1 107210 0 FVDLYGAQK VFGLGFPPCLGGPFRFVDLYGAQKIVDRLK LGGPFRFVDLYGAQKIVDRLKKYEAAYGKQ R F V Q K I 1 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 1 1 0 0 9 0 1039.5338 P40939 P40939 720 728 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0055602 114.5 By MS/MS 5.33 2.49 1 1 1 1 1 1 6 27874000 27874000 0 4774 835 4956 11530;11531;11532;11533;11534;11535 8248;8249;8250 8250 3 1374800 0 FVDPSAALDLLK ELQYLFALMMGSNRKFVDPSAALDLLKGAF NRKFVDPSAALDLLKGAFRSSEEQQQDVSE K F V L K G 2 0 0 2 0 0 0 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 12 0 1287.7075 Q96RU2 Q96RU2 232 243 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 2 0.0053903 104.22 By MS/MS 3.5 0.5 1 1 2 189020 189020 0 4775 2251 4957 11536;11537 8251;8252 8251 2 5019.4 0 FVEGVCPFCGYEEAR EQLRCEHCARFLADRFVEGVCPFCGYEEAR FVEGVCPFCGYEEARGDQCDKCGKLINAVE R F V A R G 1 1 0 0 2 0 3 2 0 0 0 0 0 2 1 0 0 0 1 2 0 0 15 0 1818.7705 P56192 P56192 400 414 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 1.2385E-05 145.81 By MS/MS 4.5 0.5 1 1 2 1889100 1889100 0 4776 1042 4958 11538;11539 8253 8253 1 53329 0 FVEKYTELQK AFDLFNPNFKSTCQRFVEKYTELQKLGETD STCQRFVEKYTELQKLGETDEEKLFVETGK R F V Q K L 0 0 0 0 0 1 2 0 0 0 1 2 0 1 0 0 1 0 1 1 0 0 10 1 1283.6762 Q9Y3D9 Q9Y3D9 99 108 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2;3 7.6084E-15 221.68 By MS/MS 9 0 3 3 11432000 11432000 0 4777 2935 4959 11540;11541;11542 8254;8255;8256 8254 3 6560700 0 FVELPGAEMGK TKARVAPEKKQDVGKFVELPGAEMGKVTVR DVGKFVELPGAEMGKVTVRFPPEASGYLHI K F V G K V 1 0 0 0 0 0 2 2 0 0 1 1 1 1 1 0 0 0 0 1 0 0 11 0 1176.5849 P07814 P07814 187 197 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0045935 109.44 By MS/MS 2.62 1.32 2 2 2 1 1 8 6175400 6175400 0 4778 493 4960;4961 11543;11544;11545;11546;11547;11548;11549;11550 8257;8258 8258 288 2 170680 0 FVEQLGSYDPLPNSHGEK YRIVAAHNKCPRDGRFVEQLGSYDPLPNSH QLGSYDPLPNSHGEKLVALNLDRIRHWIGC R F V E K L 0 0 1 1 0 1 2 2 1 0 2 1 0 1 2 2 0 0 1 1 0 0 18 0 2015.9589 Q9Y3D3 Q9Y3D3 47 64 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2;3 0.0042231 112.62 By MS/MS 10 0 2 2 1934300 1934300 0 4779 2930 4962 11551;11552 8259;8260 8259 2 2056000 0 FVESVDEYQFVER LRLLSQTQGPPDYPRFVESVDEYQFVERLL PRFVESVDEYQFVERLLPATRIPDPPKHEH R F V E R L 0 1 0 1 0 1 3 0 0 0 0 0 0 2 0 1 0 0 1 3 0 0 13 0 1645.7624 Q13405 Q13405 38 50 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 2.5636E-46 284.73 By MS/MS By matching 10 0 2 1 1 2166200 2134700 31470 4780 1364 4963 11553;11554 8261 8261 1 2269000 807190 FVGDADLER LMANGTLTRRHQNGRFVGDADLERQKFSDL RHQNGRFVGDADLERQKFSDLKLNGPQDHS R F V E R Q 1 1 0 2 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1020.4876 O60716 O60716 69 77 CTNND1 Catenin delta-1 yes yes 2 0.011002 102.62 By MS/MS 4 0 1 1 3405200 3405200 0 4781 260 4964 11555 8262 8262 1 92958 0 FVGPGGYNLK PVVETVQVPLSKRAKFVGPGGYNLKKLQAE SKRAKFVGPGGYNLKKLQAETGVTISQVDE K F V L K K 0 0 1 0 0 0 0 3 0 0 1 1 0 1 1 0 0 0 1 1 0 0 10 0 1050.5498 Q8TCS8 Q8TCS8 620 629 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.00096263 124.59 By MS/MS 5 0 1 1 1516300 1516300 0 4782 1996 4965 11556 8263 8263 1 62324 0 FVGQDVEGER VNPVWKKCLEEQGLKFVGQDVEGERMEIVE EQGLKFVGQDVEGERMEIVELEDHPFFVGV K F V E R M 0 1 0 1 0 1 2 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 10 0 1134.5306 P17812 P17812 499 508 CTPS1 CTP synthase 1 yes yes 2 0.0038335 111.27 By MS/MS 5.5 0.5 1 1 2 5612400 5612400 0 4783 615 4966 11557;11558 8264 8264 1 157140 0 FVGTDPASDEVVLMK AEGMENMADAVTHARFVGTDPASDEVVLMK FVGTDPASDEVVLMKILQVLRTLLLTPVGA R F V M K I 1 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 3 0 0 15 0 1606.7913 Q92538 Q92538 121 135 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 3.9561E-10 186.46 By MS/MS 2.33 0.471 2 1 3 1480200 1480200 0 4784 2055 4967;4968 11559;11560;11561 8265;8266;8267 8265 1334 3 66956 0 FVGVNASDINYSAGR PVPLPGDGDLLVRNRFVGVNASDINYSAGR FVGVNASDINYSAGRYDPSVKPPFDIGFEG R F V G R Y 2 1 2 1 0 0 0 2 0 1 0 0 0 1 0 2 0 0 1 2 0 0 15 0 1568.7583 Q8N4Q0 Q8N4Q0 71 85 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 2 2.4963E-38 260.57 By MS/MS 7 0.816 1 1 1 3 11400000 11400000 0 4785 1915 4969 11562;11563;11564 8268 8268 1 173210 0 FVIGGPQGDAGLTGR YLDEDTIYHLQPSGRFVIGGPQGDAGLTGR FVIGGPQGDAGLTGRKIIVDTYGGWGAHGG R F V G R K 1 1 0 1 0 1 0 5 0 1 1 0 0 1 1 0 1 0 0 1 0 0 15 0 1443.747 P31153 P31153 250 264 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 2 0.00030315 143.76 By MS/MS 6.5 0.5 1 1 2 7489900 7489900 0 4786 751 4970 11565;11566 8269 8269 1 121180 0 FVIQGAGAK MEDPGVRDTMLQALRFVIQGAGAKVDAVIR MLQALRFVIQGAGAKVDAVIRKNIVSLLLS R F V A K V 2 0 0 0 0 1 0 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 9 0 889.50215 Q92616 Q92616 2410 2418 GCN1L1 Translational activator GCN1 yes yes 2 0.0013159 137.18 By MS/MS 1.5 0.5 1 1 2 2528300 2528300 0 4787 2068 4971 11567;11568 8270 8270 1 125550 0 FVKQDQVCIAR LVDKKSGEKSKTRPRFVKQDQVCIARLRTA TRPRFVKQDQVCIARLRTAGTICLETFKDF R F V A R L 1 1 0 1 1 2 0 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 11 1 1362.7078 P15170;Q8IYD1 P15170 446 456 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 3 0.029817 78.342 By MS/MS 3 2 1 1 2 1005600 1005600 0 4788 597 4972 11569;11570 8271;8272 8272 2 42384 0 FVLPLQDHTIK LNGEKLPGLLMTIIRFVLPLQDHTIKKLLL TIIRFVLPLQDHTIKKLLLVFWEIVPKTTP R F V I K K 0 0 0 1 0 1 0 0 1 1 2 1 0 1 1 0 1 0 0 1 0 0 11 0 1309.7394 P53618 P53618 65 75 COPB1 Coatomer subunit beta yes yes 3 0.015993 82.171 By MS/MS 4.5 0.5 1 1 2 1641300 1641300 0 4789 1004 4973 11571;11572 8273 8273 1 49459 0 FVLSQAKDEL VSEHSGGRDLDSLHRFVLSQAKDEL_____ DSLHRFVLSQAKDEL_______________ R F V E L - 1 0 0 1 0 1 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 1 1148.6077 Q8NBS9 Q8NBS9 423 432 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.00080105 164.68 By MS/MS By matching 6.33 0.471 2 1 2 1 6258900 6240300 18591 4790 1945 4974 11573;11574;11575 8274 8274 1 51610 57017 FVNLGIEPPK KLREVVETPLLHPERFVNLGIEPPKGVLLF LHPERFVNLGIEPPKGVLLFGPPGTGKTLC R F V P K G 0 0 1 0 0 0 1 1 0 1 1 1 0 1 2 0 0 0 0 1 0 0 10 0 1112.623 P35998 P35998 201 210 PSMC2 26S protease regulatory subunit 7 yes yes 2 9.6219E-05 166.07 By MS/MS 7 0.816 1 1 1 3 4142100 4142100 0 4791 801 4975 11576;11577;11578 8275;8276 8276 2 57038 0 FVNVVPTFGK KKTGRAKRRMQYNRRFVNVVPTFGKKKGPN QYNRRFVNVVPTFGKKKGPNANS_______ R F V G K K 0 0 1 0 0 0 0 1 0 0 0 1 0 2 1 0 1 0 0 3 0 0 10 0 1106.6124 P62861 P62861 42 51 FAU 40S ribosomal protein S30 yes yes 2 0.0043923 109.44 By MS/MS By matching 10 0 2 1 1 699500 672220 27287 4792 1153 4976 11579;11580 8277 8277 1 714490 699880 FVPLLPGNR PQTECRHKSIELFYKFVPLLPGNRSPNLWL IELFYKFVPLLPGNRSPNLWLKDVLKEEGV K F V N R S 0 1 1 0 0 0 0 1 0 0 2 0 0 1 2 0 0 0 0 1 0 0 9 0 1011.5866 P78527 P78527 1194 1202 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.037519 90.986 By MS/MS 2.5 1.12 1 1 1 1 4 8106400 8106400 0 4793 1197 4977 11581;11582;11583;11584 8278;8279 8279 2 361530 0 FVPYLIAGIQHSCQDIGAK QGVSGAVQDKGSIHKFVPYLIAGIQHSCQD LIAGIQHSCQDIGAKSLTQVRAMMYSGELK K F V A K S 2 0 0 1 1 2 0 2 1 3 1 1 0 1 1 1 0 0 1 1 0 0 19 0 2116.0775 P12268 P12268 456 474 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.043143 70.41 By MS/MS 6 0 1 1 4330000 4330000 0 4794 564 4978 11585 8280 8280 1 33766 0 FVQCPDGELQK FTRARDYDAMGSQTKFVQCPDGELQKRKEV SQTKFVQCPDGELQKRKEVVHTVSLHEIDV K F V Q K R 0 0 0 1 1 2 1 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 11 0 1319.618 Q9Y230 Q9Y230 224 234 RUVBL2 RuvB-like 2 yes yes 2 3.4217E-05 172.27 By MS/MS 6.33 0.471 2 1 3 50781000 50781000 0 4795 2864 4979 11586;11587;11588 8281;8282;8283 8282 3 407200 0 FVQDTLKGDGVTEIR LRGALEMVQMAVEAKFVQDTLKGDGVTEIR FVQDTLKGDGVTEIRMRFIRRIEDNLPAGE K F V I R M 0 1 0 2 0 1 1 2 0 1 1 1 0 1 0 0 2 0 0 2 0 0 15 1 1676.8733 O43617 O43617 150 164 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2;3 0.0071056 116.63 By MS/MS 9.5 0.5 2 2 4 2145700 2145700 0 4796 210 4980 11589;11590;11591;11592 8284;8285;8286 8284 3 1713900 0 FVSFLGR QPPIDNIIRAGLIPKFVSFLGRTDCSPIQF IRAGLIPKFVSFLGRTDCSPIQFESAWALT K F V G R T 0 1 0 0 0 0 0 1 0 0 1 0 0 2 0 1 0 0 0 1 0 0 7 0 824.45447 P52292 P52292 124 130 KPNA2 Importin subunit alpha-1 yes yes 2 0.011441 150.02 By MS/MS 6 0.816 1 1 1 3 13126000 13126000 0 4797 983 4981 11593;11594;11595 8287 8287 1 122270 0 FVSFPTQVLAK LSNVLSSWCQYEALKFVSFPTQVLAKASKV EALKFVSFPTQVLAKASKVIPVMLMGKLVS K F V A K A 1 0 0 0 0 1 0 0 0 0 1 1 0 2 1 1 1 0 0 2 0 0 11 0 1235.6914 Q8TB61 Q8TB61 206 216 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.00097432 133.99 By MS/MS 2 0.816 1 1 1 3 357430 357430 0 4798 1988 4982 11596;11597;11598 8288 8288 1 16580 0 FVSGVLSDQMSAR GFITSSQSAAYAISKFVSGVLSDQMSARWL SKFVSGVLSDQMSARWLFSSGLLLVGLVNI K F V A R W 1 1 0 1 0 1 0 1 0 0 1 0 1 1 0 3 0 0 0 2 0 0 13 0 1395.6816 O43826 O43826 65 77 SLC37A4 Glucose-6-phosphate translocase yes yes 2 2.2468E-25 237.53 By MS/MS 1.5 0.5 1 1 2 717740 717740 0 4799 229 4983 11599;11600 8289 8289 134 1 35272 0 FVSISDLLVPK EIRPALELLEPIEQKFVSISDLLVPKDLGT IEQKFVSISDLLVPKDLGTESQIFISRTYD K F V P K D 0 0 0 1 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 2 0 0 11 0 1216.7067 P50395 P50395 380 390 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 0.00034755 148.94 By MS/MS 6.5 0.5 1 1 2 539300 539300 0 4800 944 4984 11601;11602 8290 8290 1 4737.8 0 FVTDSNAVVQLK EKSPEWSKFLGLIKKFVTDSNAVVQLKGLE IKKFVTDSNAVVQLKGLEAALVYVENAHVA K F V L K G 1 0 1 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 3 0 0 12 0 1319.7085 Q14008 Q14008 56 67 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.811E-11 208.6 By MS/MS 3 0.816 1 1 1 3 2022400 2022400 0 4801 1405 4985 11603;11604;11605 8291 8291 1 89457 0 FVTLSATNAK LAHIIASNSKKHSIRFVTLSATNAKTNDVR KHSIRFVTLSATNAKTNDVRDVIKQAQNEK R F V A K T 2 0 1 0 0 0 0 0 0 0 1 1 0 1 0 1 2 0 0 1 0 0 10 0 1050.571 Q96S55 Q96S55 292 301 WRNIP1 ATPase WRNIP1 yes yes 2 0.00062406 140.11 By MS/MS 5 0 1 1 662040 662040 0 4802 2253 4986 11606 8292 8292 1 27212 0 FVTPSEPVAHSR RAIGDGEDEMLFTRRFVTPSEPVAHSRRGR TRRFVTPSEPVAHSRRGRLHLPRGRRSRRA R F V S R R 1 1 0 0 0 0 1 0 1 0 0 0 0 1 2 2 1 0 0 2 0 0 12 0 1325.6728 O14654 O14654 399 410 IRS4 Insulin receptor substrate 4 yes yes 3 0.049176 65.179 By MS/MS 1 0 1 1 105750 105750 0 4803 118 4987 11607 8293 8293 1 5166.9 0 FVTSNTQELGK AQKMGRKDPEQEVEKFVTSNTQELGKDKWL EVEKFVTSNTQELGKDKWLCPLSGKKFKGP K F V G K D 0 0 1 0 0 1 1 1 0 0 1 1 0 1 0 1 2 0 0 1 0 0 11 0 1222.6194 Q9BXP5 Q9BXP5 700 710 SRRT Serrate RNA effector molecule homolog yes yes 2 1.3597E-10 199.33 By MS/MS 3.5 1.12 1 1 1 1 4 2679300 2679300 0 4804 2402 4988 11608;11609;11610;11611 8294 8294 1 81346 0 FVTVQTISGTGALR ELALGENSEVLKSGRFVTVQTISGTGALRI RFVTVQTISGTGALRIGASFLQRFFKFSRD R F V L R I 1 1 0 0 0 1 0 2 0 1 1 0 0 1 0 1 3 0 0 2 0 0 14 0 1448.7987 P00505 P00505 126 139 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 3.9295E-46 272.1 By MS/MS 7 0 1 1 3248100 3248100 0 4805 430 4989 11612 8295 8295 1 58044 0 FVVDLSDQVAPTDIEEGMR SEDPKYIINVKQFAKFVVDLSDQVAPTDIE LSDQVAPTDIEEGMRVGVDRNKYQIHIPLP K F V M R V 1 1 0 3 0 1 2 1 0 1 1 0 1 1 1 1 1 0 0 3 0 0 19 0 2120.0096 P35998 P35998 121 139 PSMC2 26S protease regulatory subunit 7 yes yes 2 1.0697E-07 149.35 By MS/MS 6.5 0.5 1 1 2 2319300 2319300 0 4806 801 4990 11613;11614 8296 8296 547 1 25654 0 FVVEKAEQQK VEAKQVAQQEAERARFVVEKAEQQKKAAII AERARFVVEKAEQQKKAAIISAEGDSKAAE R F V Q K K 1 0 0 0 0 2 2 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 10 1 1204.6452 P35232 P35232 198 207 PHB Prohibitin yes yes 2 3.3135E-05 176.44 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 22803000 22596000 206870 4807 782 4991 11615;11616;11617 8297;8298;8299 8298 3 1627000 1764900 FVVEKAEQQKK VEAKQVAQQEAERARFVVEKAEQQKKAAII ERARFVVEKAEQQKKAAIISAEGDSKAAEL R F V K K A 1 0 0 0 0 2 2 0 0 0 0 3 0 1 0 0 0 0 0 2 0 0 11 2 1332.7402 P35232 P35232 198 208 PHB Prohibitin yes yes 2 0.00038164 169.99 By MS/MS By matching 8.33 0.471 2 1 2 1 5545800 5517100 28686 4808 782 4992 11618;11619;11620 8300 8300 1 394970 244720 FVVSSLQGEDCR LLGDLDRSTFRKLLKFVVSSLQGEDCREAV LLKFVVSSLQGEDCREAVQRLGVSANLPEE K F V C R E 0 1 0 1 1 1 1 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 12 0 1395.6453 Q9GZQ3 Q9GZQ3 54 65 COMMD5 COMM domain-containing protein 5 yes yes 2 2.6943E-11 208.84 By MS/MS 9 0 1 1 527770 527770 0 4809 2441 4993 11621 8301 8301 1 302890 0 FVYVWDTTSR WSPDGSKIAAGSADRFVYVWDTTSRRILYK GSADRFVYVWDTTSRRILYKLPGHAGSINE R F V S R R 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 2 1 1 2 0 0 10 0 1272.6139 Q96DI7 Q96DI7 308 317 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 2 0.0031126 113.62 By MS/MS 7.5 0.5 1 1 2 612510 612510 0 4810 2152 4994 11622;11623 8302 8302 1 18636 0 FWAYEQYK NGTNVIKIAPETAVKFWAYEQYKKLLTEEG APETAVKFWAYEQYKKLLTEEGQKIGTFER K F W Y K K 1 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 1 2 0 0 0 8 0 1133.5182 Q6NUK1 Q6NUK1 269 276 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.047128 92.47 By MS/MS 7 0 1 1 1800900 1800900 0 4811 1690 4995 11624 8303 8303 1 32183 0 FWEVISDEHGIDPTGTYHGDSDLQLDR VHIQAGQCGNQIGAKFWEVISDEHGIDPTG PTGTYHGDSDLQLDRISVYYNEATGGKYVP K F W D R I 0 1 0 5 0 1 2 3 2 2 2 0 0 1 1 2 2 1 1 1 0 0 27 0 3101.4003 P07437 P07437 20 46 TUBB Tubulin beta chain yes yes 3 1.0709E-08 103.9 By MS/MS 6 0 1 1 15541000 15541000 0 4812 490 4996 11625 8304 8304 1 121190 0 FWEVISDEHGIDPTGTYHGDSDLQLER VHLQAGQCGNQIGAKFWEVISDEHGIDPTG PTGTYHGDSDLQLERINVYYNEATGGKYVP K F W E R I 0 1 0 4 0 1 3 3 2 2 2 0 0 1 1 2 2 1 1 1 0 0 27 0 3115.4159 P68371;P04350 P68371 20 46 TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 3;4 5.3479E-12 126.32 By MS/MS 6 0 2 2 19436000 19436000 0 4813 1187;451 4997 11626;11627 8305;8306;8307 8307 3 151560 0 FWTVADTVK ASANEILGSLRWRDRFWTVADTVKVDAPGL LRWRDRFWTVADTVKVDAPGLALLALHWHW R F W V K V 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 2 1 0 2 0 0 9 0 1065.5495 Q9NU22 Q9NU22 2727 2735 MDN1 Midasin yes yes 2 0.041651 84.498 By MS/MS 1 0 1 1 166090 166090 0 4814 2635 4998 11628 8308 8308 1 8114.6 0 FYALDPSFPR VFIPEDDPLFPPIEKFYALDPSFPRMNLLT PPIEKFYALDPSFPRMNLLTRTTEGKKRQL K F Y P R M 1 1 0 1 0 0 0 0 0 0 1 0 0 2 2 1 0 0 1 0 0 0 10 0 1211.5975 Q08J23 Q08J23 536 545 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.0061899 103.56 By MS/MS 4 0 1 1 278420 278420 0 4815 1295 4999 11629 8309 8309 1 7600.6 0 FYDANYDGK GRFQDNLDFIQWFKKFYDANYDGKEYDPVE IQWFKKFYDANYDGKEYDPVEARQGQDAIP K F Y G K E 1 0 1 2 0 0 0 1 0 0 0 1 0 1 0 0 0 0 2 0 0 0 9 0 1091.456 Q15555 Q15555 157 165 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.020122 96.665 By MS/MS 7.5 0.5 1 1 2 1423200 1423200 0 4816 1508 5000 11630;11631 8310 8310 1 31049 0 FYDDAIVSQK PRDIDAFWLQRQLSRFYDDAIVSQKKADEV RQLSRFYDDAIVSQKKADEVLEILKTASDD R F Y Q K K 1 0 0 2 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 10 0 1184.5714 O75643 O75643 275 284 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.00066809 153.05 By MS/MS 2 0.816 1 1 1 3 2005500 2005500 0 4817 322 5001 11632;11633;11634 8311;8312 8311 2 93922 0 FYEAFSK ELFSELAEDKENYKKFYEAFSKNLKLGIHE EDKENYKKFYEAFSKNLKLGIHEDSTNRRR K F Y S K N 1 0 0 0 0 0 1 0 0 0 0 1 0 2 0 1 0 0 1 0 0 0 7 0 890.41742 P08238 P08238 429 435 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.012051 148.33 By MS/MS By matching 5.83 1.34 1 2 1 1 1 5 1 44412000 44381000 30082 4818 501 5002 11635;11636;11637;11638;11639;11640 8313;8314 8313 2 1368100 89013 FYEEVHDLER ALKNLQVKCAQIEAKFYEEVHDLERKYAVL QIEAKFYEEVHDLERKYAVLYQPLFDKRFE K F Y E R K 0 1 0 1 0 0 3 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1335.6095 P55209;Q99733 P55209 95 104 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 no no 2 7.6838E-05 168.26 By MS/MS 7.5 1.12 1 1 1 1 4 14676000 14676000 0 4819 1030;2288 5003 11641;11642;11643;11644 8315;8316;8317;8318 8315 4 167260 0 FYEEVHDLERK ALKNLQVKCAQIEAKFYEEVHDLERKYAVL IEAKFYEEVHDLERKYAVLYQPLFDKRFEI K F Y R K Y 0 1 0 1 0 0 3 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1463.7045 P55209;Q99733 P55209 95 105 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 no no 2;3 2.449E-06 204.34 By MS/MS 6.5 0.5 2 2 4 22891000 22891000 0 4820 1030;2288 5004 11645;11646;11647;11648 8319;8320 8320 2 190700 0 FYEQFSK ELFTELAEDKENYKKFYEQFSKNIKLGIHE EDKENYKKFYEQFSKNIKLGIHEDSQNRKK K F Y S K N 0 0 0 0 0 1 1 0 0 0 0 1 0 2 0 1 0 0 1 0 0 0 7 0 947.43888 P07900 P07900 437 443 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0063956 172.14 By MS/MS 5 1.41 1 1 1 1 1 5 34719000 34719000 0 4821 494 5005 11649;11650;11651;11652;11653 8321;8322 8321 2 940390 0 FYFHDGVR EYTEQVVKLMVPLLKFYFHDGVRVAAAESM LMVPLLKFYFHDGVRVAAAESMPLLLECAR K F Y V R V 0 1 0 1 0 0 0 1 1 0 0 0 0 2 0 0 0 0 1 1 0 0 8 0 1039.4876 O00410 O00410 713 720 IPO5 Importin-5 yes yes 2 0.04858 91.9 By MS/MS 4 0 1 1 1089000 1089000 0 4822 91 5006 11654 8323 8323 1 29728 0 FYGELALK SRLMDEFKIGELFSKFYGELALKKKIPDTV IGELFSKFYGELALKKKIPDTVLEKVYELL K F Y L K K 1 0 0 0 0 0 1 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 8 0 939.50657 P78527 P78527 156 163 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.055211 89.296 By MS/MS 3 1.41 1 1 1 1 1 5 2481400 2481400 0 4823 1197 5007 11655;11656;11657;11658;11659 8324 8324 1 108820 0 FYGELALKK SRLMDEFKIGELFSKFYGELALKKKIPDTV GELFSKFYGELALKKKIPDTVLEKVYELLG K F Y K K K 1 0 0 0 0 0 1 1 0 0 2 2 0 1 0 0 0 0 1 0 0 0 9 1 1067.6015 P78527 P78527 156 164 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0093575 125.31 By MS/MS 2 0.816 1 1 1 3 893740 893740 0 4824 1197 5008 11660;11661;11662 8325 8325 1 38116 0 FYGPEGPYGVFAGR MAINGKVFDVTKGRKFYGPEGPYGVFAGRD KFYGPEGPYGVFAGRDASRGLATFCLDKEA K F Y G R D 1 1 0 0 0 0 1 4 0 0 0 0 0 2 2 0 0 0 2 1 0 0 14 0 1515.7147 O00264 O00264 106 119 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 1.7223E-05 162.36 By MS/MS 9 0.816 1 1 1 3 2616300 2616300 0 4825 85 5009 11663;11664;11665 8326;8327 8326 2 1448700 0 FYIEGSEPGK FTEYVKDGLKHTCVKFYIEGSEPGKQGTVY HTCVKFYIEGSEPGKQGTVYAQVKENPGSG K F Y G K Q 0 0 0 0 0 0 2 2 0 1 0 1 0 1 1 1 0 0 1 0 0 0 10 0 1125.5342 Q9BVV7 Q9BVV7 195 204 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 4.3573E-08 195.05 By MS/MS 9 0 1 1 938070 938070 0 4826 2386 5010 11666 8328 8328 1 538360 0 FYNELTEILVR DNFVELVANLKEGTKFYNELTEILVRFQNK EGTKFYNELTEILVRFQNKCSDIVFARKTE K F Y V R F 0 1 1 0 0 0 2 0 0 1 2 0 0 1 0 0 1 0 1 1 0 0 11 0 1395.7398 Q8WUM4 Q8WUM4 676 686 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 5.03E-16 256.38 By MS/MS 4 0 1 1 204210 204210 0 4827 2019 5011 11667 8329 8329 1 5574.6 0 FYPLEIDYGQDEEAVK GNAWHSKNFTKYPKKFYPLEIDYGQDEEAV YPLEIDYGQDEEAVKKLTVNPGTKSKLPKP K F Y V K K 1 0 0 2 0 1 3 1 0 1 1 1 0 1 1 0 0 0 2 1 0 0 16 0 1914.8887 P09874 P09874 638 653 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 6.5301E-07 157.2 By MS/MS 4.5 0.5 1 1 2 994400 994400 0 4828 521 5012 11668;11669 8330 8330 1 27477 0 FYQGFLFSEKPEK NCAISVICCVFNELKFYQGFLFSEKPEKNL LKFYQGFLFSEKPEKNLLIFENLIDLKRRY K F Y E K N 0 0 0 0 0 1 2 1 0 0 1 2 0 3 1 1 0 0 1 0 0 0 13 1 1618.8031 P78527 P78527 1961 1973 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.3126E-05 140.24 By MS/MS 1 0 1 1 0 0 0 4829 1197 5013 11670 8331 8331 1 0 0 FYQPYSEDTQQQIIR AILIFNNHGKPRLSKFYQPYSEDTQQQIIR FYQPYSEDTQQQIIRETFHLVSKRDENVCN K F Y I R E 0 1 0 1 0 4 1 0 0 2 0 0 0 1 1 1 1 0 2 0 0 0 15 0 1914.9112 Q92572 Q92572 19 33 AP3S1 AP-3 complex subunit sigma-1 yes yes 2 4.2813E-07 188.96 By MS/MS 9 0 1 1 761640 761640 0 4830 2060 5014 11671 8332 8332 1 437110 0 FYQVPVPLPDR CEPMIGLVPILKGGRFYQVPVPLPDRRRRF KGGRFYQVPVPLPDRRRRFLAMKWMITECR R F Y D R R 0 1 0 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 2 0 0 11 0 1329.7081 Q9Y2R9 Q9Y2R9 167 177 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.0082133 99.973 By MS/MS By matching 8 0 2 1 1 8650700 8624600 26087 4831 2899 5015 11672;11673 8333 8333 1 568960 222560 FYQVPVPLPDRR CEPMIGLVPILKGGRFYQVPVPLPDRRRRF GGRFYQVPVPLPDRRRRFLAMKWMITECRD R F Y R R R 0 2 0 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 2 0 0 12 1 1485.8092 Q9Y2R9 Q9Y2R9 167 178 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 3 0.043973 82.417 By MS/MS 8 0 1 1 1100200 1100200 0 4832 2899 5016 11674 8334 8334 1 72581 0 FYSLLDPSYAK ALLMLTGKISPWTGRFYSLLDPSYAKNNIP WTGRFYSLLDPSYAKNNIPIIASVSEHQPT R F Y A K N 1 0 0 1 0 0 0 0 0 0 2 1 0 1 1 2 0 0 2 0 0 0 11 0 1302.6496 P46977 P46977 330 340 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00024669 153.05 By MS/MS 3 1.41 1 1 1 1 1 5 2915200 2915200 0 4833 893 5017 11675;11676;11677;11678;11679 8335;8336;8337;8338;8339 8339 5 117110 0 FYSLPQSPQQFK GGAKEFLVPSREPGKFYSLPQSPQQFKQLL PGKFYSLPQSPQQFKQLLMVGGLDRYFQVA K F Y F K Q 0 0 0 0 0 3 0 0 0 0 1 1 0 2 2 2 0 0 1 0 0 0 12 0 1468.7351 Q6PI48 Q6PI48 236 247 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.00017202 153.97 By MS/MS 5.5 0.5 1 1 2 6413700 6413700 0 4834 1715 5018 11680;11681 8340 8340 1 209640 0 FYSVNVDYSK NPEPWNKLGPNDQYKFYSVNVDYSKLKKER NDQYKFYSVNVDYSKLKKERPDF_______ K F Y S K L 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 0 0 2 2 0 0 10 0 1220.5714 O00483 O00483 64 73 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 2.1648E-21 238.51 By MS/MS By MS/MS 10 0 2 1 1 40212000 40022000 190050 4835 99 5019 11682;11683 8341;8342 8342 2 42540000 4874700 FYSVYGSGQR PIQDIWYHEDRIRAKFYSVYGSGQRAFDLF RIRAKFYSVYGSGQRAFDLFNPNFKSTCQR K F Y Q R A 0 1 0 0 0 1 0 2 0 0 0 0 0 1 0 2 0 0 2 1 0 0 10 0 1162.5407 Q9Y3D9 Q9Y3D9 74 83 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 4.7617E-05 171.56 By MS/MS 9 0 1 1 5023500 5023500 0 4836 2935 5020 11684 8343 8343 1 2883000 0 FYTEDSPGLK SAGRTTSAGTGGMWRFYTEDSPGLKVGPVP GGMWRFYTEDSPGLKVGPVPVLVMSLLFIA R F Y L K V 0 0 0 1 0 0 1 1 0 0 1 1 0 1 1 1 1 0 1 0 0 0 10 0 1155.5448 P60468 P60468 58 67 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.00077622 133.23 By MS/MS 10 0 1 1 6722900 6722900 0 4837 1066 5021 11685 8344 8344 1 7145800 0 FYTQQWEDYR LLKDGEDLMDESVLKFYTQQWEDYRFSSKV ESVLKFYTQQWEDYRFSSKVLNGICAYLNR K F Y Y R F 0 1 0 1 0 2 1 0 0 0 0 0 0 1 0 0 1 1 2 0 0 0 10 0 1434.6204 Q13616 Q13616 118 127 CUL1 Cullin-1 yes yes 2 0.0002477 154.84 By MS/MS 4.5 0.5 1 1 2 1516500 1516500 0 4838 1387 5022 11686;11687 8345 8345 1 52455 0 FYVPPTQEDGVDPVEAFAQNVLSK FHQNDDAEVSLMEVRFYVPPTQEDGVDPVE GVDPVEAFAQNVLSKADVIQATGDAICIFR R F Y S K A 2 0 1 2 0 2 2 1 0 0 1 1 0 2 3 1 1 0 1 4 0 0 24 0 2649.2962 Q08945 Q08945 165 188 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.0034221 71.601 By MS/MS 6 0 1 1 168690 168690 0 4839 1291 5023 11688 8346 8346 1 1315.5 0 GAAACDLVQR RSGRGLDGAVDMGARGAAACDLVQRFVREA DMGARGAAACDLVQRFVREAQSQGAQVFQA R G A Q R F 3 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1059.5131 Q8IZ83 Q8IZ83 346 355 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2 0.0023362 141.52 By MS/MS 5 0 1 1 0 0 0 4840 1886 5024 11689 8347 8347 1 0 0 GAAAHPDSEEQQQR KILADATAKMVEAAKGAAAHPDSEEQQQRL KGAAAHPDSEEQQQRLREAAEGLRMATNAA K G A Q R L 3 1 0 1 0 3 2 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 14 0 1522.676 Q9Y490 Q9Y490 876 889 TLN1 Talin-1 yes yes 2;3 4.6556E-08 178.71 By MS/MS 2.33 0.471 2 1 3 1625300 1625300 0 4841 2947 5025 11690;11691;11692 8348;8349 8348 2 79713 0 GAADVEKVEEK EVKERTEEPMETEPKGAADVEKVEEKSAID TEPKGAADVEKVEEKSAIDLTPIVVEDKEE K G A E K S 2 0 0 1 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 2 0 0 11 1 1173.5877 Q14839 Q14839 1637 1647 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 6.779E-06 179.42 By MS/MS 1.5 0.5 1 1 2 775570 775570 0 4842 1449 5026 11693;11694 8350 8350 1 38475 0 GAAGALLVYDITR AGQESFRSITRSYYRGAAGALLVYDITRRD YRGAAGALLVYDITRRDTFNHLTTWLEDAR R G A T R R 3 1 0 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 1 1 0 0 13 0 1318.7245 P61019;Q8WUD1 P61019 78 90 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 2 0.015033 88.596 By MS/MS 9 0 1 1 115010 115010 0 4843 1083 5027 11695 8351 8351 1 66003 0 GAAGALMVYDITR AGQERFRAVTRSYYRGAAGALMVYDITRRS YRGAAGALMVYDITRRSTYNHLSSWLTDAR R G A T R R 3 1 0 1 0 0 0 2 0 1 1 0 1 0 0 0 1 0 1 1 0 0 13 0 1336.6809 P61106 P61106 83 95 RAB14 Ras-related protein Rab-14 yes yes 2 0.00021951 141.95 By MS/MS 9 0 1 1 505040 505040 0 4844 1088 5028 11696 8352 8352 855 1 289850 0 GAAGSSALAR ______________________________ ______________________________ M G A A R F 4 1 0 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 10 0 859.45118 Q5VT66 Q5VT66 2 11 MARC1 Mitochondrial amidoxime-reducing component 1 yes yes 2 0.00039733 148.99 By MS/MS 8 0 1 1 642060 642060 0 4845 1648 5029 11697 8353 8353 1 42357 0 GAALITAVACR KCDVSFLQSEDGSGKGAALITAVACRIREA GSGKGAALITAVACRIREAGQR________ K G A C R I 4 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1101.5965 P52789 P52789 900 910 HK2 Hexokinase-2 yes yes 2 0.00049564 142.92 By MS/MS 4 0 1 1 1036600 1036600 0 4846 992 5030 11698 8354 8354 1 28299 0 GAALITAVGVR KCNVSFLLSEDGSGKGAALITAVGVRLRTE GSGKGAALITAVGVRLRTEASS________ K G A V R L 3 1 0 0 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1026.6186 P19367 P19367 900 910 HK1 Hexokinase-1 yes yes 2 0.00042677 145.72 By MS/MS 4.5 0.5 1 1 2 1176600 1176600 0 4847 630 5031 11699;11700 8355 8355 1 32720 0 GAAMVTAVAYR DSDVRFLLSESGSGKGAAMVTAVAYRLAEQ GSGKGAAMVTAVAYRLAEQHRQIEETLAHF K G A Y R L 4 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 2 0 0 11 0 1108.5699 P19367;P52789 P19367 452 462 HK1;HK2 Hexokinase-1;Hexokinase-2 no no 2 7.0785E-07 177.36 By MS/MS 3.67 0.471 1 2 3 1655100 1655100 0 4848 630;992 5032;5033 11701;11702;11703 8356;8357 8356 421 2 45102 0 GAAVNLTLVTPEK LIKTVRSEGYFGMYRGAAVNLTLVTPEKAI YRGAAVNLTLVTPEKAIKLAANDFFRHQLS R G A E K A 2 0 1 0 0 0 1 1 0 0 2 1 0 0 1 0 2 0 0 2 0 0 13 0 1311.7398 Q9H936;Q9H1K4 Q9H936 68 80 SLC25A22;SLC25A18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 yes no 2 8.684E-12 204.17 By MS/MS 8 0 1 1 5499800 5499800 0 4849 2528 5034 11704 8358 8358 1 362820 0 GAAYGLAGLVK LMQQLLESDKYAERKGAAYGLAGLVKGLGI AERKGAAYGLAGLVKGLGILSLKQQEMMAA K G A V K G 3 0 0 0 0 0 0 3 0 0 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1018.5811 Q92616 Q92616 1396 1406 GCN1L1 Translational activator GCN1 yes yes 2 0.00010096 161.68 By MS/MS 2.5 0.5 1 1 2 934870 934870 0 4850 2068 5035 11705;11706 8359;8360 8359 2 40691 0 GADCCVLVFDVTAPNTFK AGQERFQSLGVAFYRGADCCVLVFDVTAPN CCVLVFDVTAPNTFKTLDSWRDEFLIQASP R G A F K T 2 0 1 2 2 0 0 1 0 0 1 1 0 2 1 0 2 0 0 3 0 0 18 0 2012.9336 P51149 P51149 80 97 RAB7A Ras-related protein Rab-7a yes yes 2 0.016098 77.912 By MS/MS 9 0 1 1 72003 72003 0 4851 960 5036 11707 8361 8361 1 41323 0 GADFLVTEVENGGSLGSK IYVDDGLISLQVKQKGADFLVTEVENGGSL FLVTEVENGGSLGSKKGVNLPGAAVDLPAV K G A S K K 1 0 1 1 0 0 2 4 0 0 2 1 0 1 0 2 1 0 0 2 0 0 18 0 1778.8687 P14618 P14618 189 206 PKM Pyruvate kinase PKM yes yes 2 3.3895E-99 344.48 By MS/MS 5.43 2.77 1 1 1 1 1 1 1 7 13088000 13088000 0 4852 588 5037 11708;11709;11710;11711;11712;11713;11714 8362;8363;8364 8363 3 164870 0 GADIMYTGTVDCWR FDTVRRRMMMQSGRKGADIMYTGTVDCWRK KGADIMYTGTVDCWRKIFRDEGGKAFFKGA K G A W R K 1 1 0 2 1 0 0 2 0 1 0 0 1 0 0 0 2 1 1 1 0 0 14 0 1643.7072 P12235;P12236 P12236 246 259 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 1.1342E-25 235.01 By MS/MS 3 2.61 2 1 1 1 5 3191500 3191500 0 4853 563;562 5038;5039 11715;11716;11717;11718;11719 8365;8366;8367;8368;8369 8365 354 5 172100 0 GADVFLEALAR TLYFFIAGRYEFSNKGADVFLEALARLNYL FSNKGADVFLEALARLNYLLRVNGSEQTVV K G A A R L 3 1 0 1 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 11 0 1160.619 P13807 P13807 338 348 GYS1 Glycogen [starch] synthase, muscle yes yes 2 0.0010448 155.06 By MS/MS 5 0.816 1 1 1 3 1395400 1395400 0 4854 583 5040 11720;11721;11722 8370;8371 8371 2 35988 0 GAEAANVTGPGGVPVQGSK GDGETVEFDVVEGEKGAEAANVTGPGGVPV ANVTGPGGVPVQGSKYAADRNHYRRYPRRR K G A S K Y 3 0 1 0 0 1 1 5 0 0 0 1 0 0 2 1 1 0 0 3 0 0 19 0 1694.8588 P67809 P67809 119 137 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 2 1.2777E-14 238.67 By MS/MS By matching 6.33 0.471 2 1 2 1 3886000 3840100 45945 4855 1182 5041 11723;11724;11725 8372 8372 1 32873 140910 GAEDDLNTVAAGTMTGMLYK ALLYSAFGVIIEKTRGAEDDLNTVAAGTMT LNTVAAGTMTGMLYKCTGGLRGIARGGLTG R G A Y K C 3 0 1 2 0 0 1 3 0 0 2 1 2 0 0 0 3 0 1 1 0 0 20 0 2056.9445 O14925;Q5SRD1 O14925 150 169 TIMM23;TIMM23B Mitochondrial import inner membrane translocase subunit Tim23;Putative mitochondrial import inner membrane translocase subunit Tim23B yes no 2;3 1.6334E-32 230.57 By MS/MS 9.29 0.452 5 2 7 5527500 5527500 0 4856 133 5042;5043;5044 11726;11727;11728;11729;11730;11731;11732 8373;8374;8375;8376;8377;8378 8373 83;84 6 3369200 0 GAEILEVLHSLPAVR MIALERPDLREKVIKGAEILEVLHSLPAVR GAEILEVLHSLPAVRQYLFSLYECRYSVFF K G A V R Q 2 1 0 0 0 0 2 1 1 1 3 0 0 0 1 1 0 0 0 2 0 0 15 0 1602.9093 Q15008 Q15008 243 257 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 3 0.014386 77.776 By MS/MS 6 0 1 1 1136600 1136600 0 4857 1460 5045 11733 8379 8379 1 8863.4 0 GAEQLAEGGR NSLQLHGLQLRIATRGAEQLAEGGRMVYST RIATRGAEQLAEGGRMVYSTCSLNPIEDEA R G A G R M 2 1 0 0 0 1 2 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 0 986.47812 Q08J23 Q08J23 306 315 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.00082193 131.12 By MS/MS 4.5 0.5 1 1 2 2276000 2276000 0 4858 1295 5046 11734;11735 8380 8380 1 66393 0 GAEYVSAR VQENCIDLVGRIADRGAEYVSAREWMRICF VGRIADRGAEYVSAREWMRICFELLELLKA R G A A R E 2 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 8 0 851.41373 O75533 O75533 1046 1053 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.018258 109.01 By MS/MS 3.5 0.5 1 1 2 739160 739160 0 4859 315 5047 11736;11737 8381 8381 1 19670 0 GAFQTGQGPLDAQVK SEFLLKLIHILSTERGAFQTGQGPLDAQVK GAFQTGQGPLDAQVKLLEFTLEQNFEVVSV R G A V K L 2 0 0 1 0 3 0 3 0 0 1 1 0 1 1 0 1 0 0 1 0 0 15 0 1515.7682 Q9NR09 Q9NR09 2824 2838 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 1.4787E-28 241.35 By MS/MS 1.5 0.5 1 1 2 1147500 1147500 0 4860 2596 5048 11738;11739 8382;8383 8382 2 56297 0 GAFSEEYKR KMVSADAYKITPGARGAFSEEYKRLDEDLA ITPGARGAFSEEYKRLDEDLAAYCRRRDIR R G A K R L 1 1 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1085.5142 P09543 P09543 94 102 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.0098359 123.98 By MS/MS 7 0 1 1 1067000 1067000 0 4861 516 5049 11740 8384 8384 1 19067 0 GAGGTIITNFER YKNGWIVMIAIGWARGAGGTIITNFERLVK WARGAGGTIITNFERLVKGDWKPEGDEWLK R G A E R L 1 1 1 0 0 0 1 3 0 2 0 0 0 1 0 0 2 0 0 0 0 0 12 0 1234.6306 Q9NVV0 Q9NVV0 152 163 TMEM38B Trimeric intracellular cation channel type B yes yes 2 8.1058E-06 175.15 By MS/MS 2.5 1.12 1 1 1 1 4 910390 910390 0 4862 2662 5050 11741;11742;11743;11744 8385 8385 1 39831 0 GAGGVAGGPAAGPGR ______________________________ GAGGVAGGPAAGPGRSPGESALLDGWLQRG R G A G R S 4 1 0 0 0 0 0 7 0 0 0 0 0 0 2 0 0 0 0 1 0 0 15 0 1150.5843 Q96A46 Q96A46 7 21 SLC25A28 Mitoferrin-2 yes yes 2 0.007747 97.965 By MS/MS 7.5 0.5 1 1 2 1682600 1682600 0 4863 2116 5051 11745;11746 8386 8386 1 59512 0 GAGIGGLGITVEGPSESK EAFTNKPNVFTVVTRGAGIGGLGITVEGPS IGGLGITVEGPSESKINCRDNKDGSCSAEY R G A S K I 1 0 0 0 0 0 2 6 0 2 1 1 0 0 1 2 1 0 0 1 0 0 18 0 1627.8417 O75369 O75369 1355 1372 FLNB Filamin-B yes yes 2 7.686E-07 143.55 By MS/MS 2.5 0.5 1 1 2 516130 516130 0 4864 300 5052 11747;11748 8387 8387 1 20189 0 GAGPQLLEELDNAPGSDAAELELAPAR AGRLLPPWRPWWWNRGAGPQLLEELDNAPG APGSDAAELELAPARTPPDSVKDASAAEPA R G A A R T 6 1 1 2 0 1 4 3 0 0 5 0 0 0 3 1 0 0 0 0 0 0 27 0 2703.3352 Q9UHR6 Q9UHR6 134 160 ZNHIT2 Zinc finger HIT domain-containing protein 2 yes yes 3 0.0065838 54.259 By MS/MS 6 0 1 1 946090 946090 0 4865 2782 5053 11749 8388 8388 1 7377.6 0 GAGSIAGASASPK KSVEEVASEIQPFLRGAGSIAGASASPKEK LRGAGSIAGASASPKEKYSLVEAKRKKLIS R G A P K E 4 0 0 0 0 0 0 3 0 1 0 1 0 0 1 3 0 0 0 0 0 0 13 0 1072.5513 P15924 P15924 2014 2026 DSP Desmoplakin yes yes 2 1.7503E-07 180.66 By MS/MS 2 0 1 1 948210 948210 0 4866 603 5054 11750 8389 8389 1 47131 0 GAGTGGLGLAVEGPSEAK SGTTNKPNKFTVETRGAGTGGLGLAVEGPS TGGLGLAVEGPSEAKMSCMDNKDGSCSVEY R G A A K M 3 0 0 0 0 0 2 6 0 0 2 1 0 0 1 1 1 0 0 1 0 0 18 0 1569.7999 P21333 P21333 1382 1399 FLNA Filamin-A yes yes 2 9.8625E-07 187.74 By MS/MS 2 0.816 1 1 1 3 3723900 3723900 0 4867 648 5055 11751;11752;11753 8390;8391 8390 2 164860 0 GAGTGGLGLTVEGPCEAK GGLVGKPAEFTIDTKGAGTGGLGLTVEGPC TGGLGLTVEGPCEAKIECSDNGDGTCSVSY K G A A K I 2 0 0 0 1 0 2 6 0 0 2 1 0 0 1 0 2 0 0 1 0 0 18 0 1672.809 O75369 O75369 1067 1084 FLNB Filamin-B no no 2 1.2505E-10 180.09 By MS/MS 2.5 0.5 1 1 2 684920 684920 0 4868 300 5056 11754;11755 8392;8393 8393 2 30161 0 GAGTLAAQALR ______________________________ RLLRGAGTLAAQALRARGPSGAAAMRSMAS R G A L R A 4 1 0 0 0 1 0 2 0 0 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1027.5774 P10606 P10606 8 18 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 2 0.00028491 157.99 By MS/MS 10 0 1 1 0 0 0 4869 540 5057 11756 8394 8394 1 0 0 GAGWLFGAK WSDPEDVDTWAISPRGAGWLFGAKVTNEFV WAISPRGAGWLFGAKVTNEFVHINNLKLIC R G A A K V 2 0 0 0 0 0 0 3 0 0 1 1 0 1 0 0 0 1 0 0 0 0 9 0 905.47594 O00743 O00743 211 219 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 0.027551 92.467 By MS/MS 8 0 1 1 676550 676550 0 4870 106 5058 11757 8395 8395 1 44632 0 GAHHYTGLLK RLVSFLEAKAENLHRGAHHYTGLLKLQERV ENLHRGAHHYTGLLKLQERVLNNVVIHLLG R G A L K L 1 0 0 0 0 0 0 2 2 0 2 1 0 0 0 0 1 0 1 0 0 0 10 0 1095.5825 P42858 P42858 893 902 HTT Huntingtin yes yes 3 0.010223 93.178 By MS/MS 1 0 1 1 306570 306570 0 4871 858 5059 11758 8396 8396 1 14978 0 GAIDHYVTPVK PITRKSVGHRMGGGKGAIDHYVTPVKAGRL GGGKGAIDHYVTPVKAGRLVVEMGGRCEFE K G A V K A 1 0 0 1 0 0 0 1 1 1 0 1 0 0 1 0 1 0 1 2 0 0 11 0 1198.6346 Q9NX20 Q9NX20 145 155 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 2 0.00043323 145.46 By MS/MS 8 0 1 1 2549500 2549500 0 4872 2676 5060 11759 8397 8397 1 168190 0 GAIENLLAK EHRYQFLEEAFQNQKGAIENLLAKLLEKKN AFQNQKGAIENLLAKLLEKKNYVHFAATQV K G A A K L 2 0 1 0 0 0 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 927.53893 Q9UPN9 Q9UPN9 321 329 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.0029682 120.15 By MS/MS 3.5 0.5 1 1 2 803650 803650 0 4873 2852 5061 11760;11761 8398 8398 1 21074 0 GAIETYQEVASLPDVPADLLK EDDLAEKRRSNEVLRGAIETYQEVASLPDV QEVASLPDVPADLLKLSLKRRSDRQQFLGH R G A L K L 3 0 0 2 0 1 2 1 0 1 3 1 0 0 2 1 1 0 1 2 0 0 21 0 2228.1576 Q12797 Q12797 400 420 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.0011571 92.265 By MS/MS 4 0 1 1 122670 122670 0 4874 1307 5062 11762 8399;8400 8399 2 3348.6 0 GAILTGPPGTGK KNPKQYQDLGAKIPKGAILTGPPGTGKTLL IPKGAILTGPPGTGKTLLAKATAGEANVPF K G A G K T 1 0 0 0 0 0 0 4 0 1 1 1 0 0 2 0 2 0 0 0 0 0 12 0 1067.5975 Q9Y4W6 Q9Y4W6 343 354 AFG3L2 AFG3-like protein 2 yes yes 2 0.044287 76.228 By MS/MS 5 0 1 1 2774800 2774800 0 4875 2960 5063 11763 8401 8401 1 114060 0 GAIREYQTQLIQR IFSRFNALFVRPHIRGAIREYQTQLIQRVK IRGAIREYQTQLIQRVKDDIESLHDKFKVQ R G A Q R V 1 2 0 0 0 3 1 1 0 2 1 0 0 0 0 0 1 0 1 0 0 0 13 1 1574.8529 Q14204 Q14204 599 611 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0092697 75.89 By MS/MS 1 0 1 1 304000 304000 0 4876 1421 5064 11764 8402 8402 1 14853 0 GAKAEEILEK GIRRNEKIAVHCTVRGAKAEEILEKGLKVR HCTVRGAKAEEILEKGLKVREYELRKNNFS R G A E K G 2 0 0 0 0 0 3 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1086.5921 P62913 P62913 76 85 RPL11 60S ribosomal protein L11 yes yes 2 0.024775 112.83 By MS/MS 9 0 1 1 1211200 1211200 0 4877 1161 5065 11765 8403 8403 1 695100 0 GAKDCVEAAK SFPRSGTQSDKVTLKGAKDCVEAAKKRIQE KVTLKGAKDCVEAAKKRIQEIIEDLEAQVT K G A A K K 3 0 0 1 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1047.5019 Q00341 Q00341 851 860 HDLBP Vigilin yes yes 2 0.025052 112.71 By MS/MS 3.5 0.5 1 1 2 980520 980520 0 4878 1231 5066 11766;11767 8404 8404 1 25722 0 GALAETGAGAK PYSFFTKLTADELWKGALAETGAGAKKGRG ELWKGALAETGAGAKKGRGKRTKKKKRKDL K G A A K K 4 0 0 0 0 0 1 3 0 0 1 1 0 0 0 0 1 0 0 0 0 0 11 0 944.49271 P82675 P82675 101 111 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.0013771 128.6 By MS/MS 6 0.816 1 1 1 3 8343300 8343300 0 4879 1205 5067 11768;11769;11770 8405 8405 1 153550 0 GALALAQAVQR AFDAVKCTHWAEGGKGALALAQAVQRAAQA EGGKGALALAQAVQRAAQAPSSFQLLYDLK K G A Q R A 4 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1096.6353 P11586 P11586 794 804 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 3.7562E-07 188.98 By MS/MS 4.5 0.5 1 1 2 11568000 11568000 0 4880 556 5068 11771;11772 8406 8406 1 331080 0 GALFGANANR SRLDLIAQQMMPEVRGALFGANANRKFLD_ MPEVRGALFGANANRKFLD___________ R G A N R K 3 1 2 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 10 0 989.50428 P36543 P36543 213 222 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 2 0.0007216 135.77 By MS/MS 8 0 1 1 511070 511070 0 4881 806 5069 11773 8407 8407 1 33715 0 GALIVLEGVDR ______________________________ AARRGALIVLEGVDRAGKSTQSRKLVEALC R G A D R A 1 1 0 1 0 0 1 2 0 1 2 0 0 0 0 0 0 0 0 2 0 0 11 0 1140.6503 P23919 P23919 6 16 DTYMK Thymidylate kinase yes yes 2 0.0018459 122.33 By MS/MS 9 0 1 1 1991000 1991000 0 4882 675 5070 11774 8408 8408 1 1142600 0 GALPLDTVTFYK LLLSAPHGGSGLHTKGALPLDTVTFYKVIP HTKGALPLDTVTFYKVIPKSKFVLVKFDTQ K G A Y K V 1 0 0 1 0 0 0 1 0 0 2 1 0 1 1 0 2 0 1 1 0 0 12 0 1323.7075 P30040 P30040 37 48 ERP29 Endoplasmic reticulum resident protein 29 yes yes 2 0.00046116 123.63 By MS/MS 8.5 0.5 1 1 2 792190 792190 0 4883 728 5071 11775;11776 8409 8409 1 94963 0 GALQNIIPASTGAAK KTVDGPSGKLWRDGRGALQNIIPASTGAAK GALQNIIPASTGAAKAVGKVIPELNGKLTG R G A A K A 4 0 1 0 0 1 0 2 0 2 1 1 0 0 1 1 1 0 0 0 0 0 15 0 1410.7831 P04406 P04406 201 215 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.0024647 113.61 By MS/MS By matching 5.4 3.01 2 1 1 2 2 1 1 6 4 75104000 74862000 241550 4884 452 5072 11777;11778;11779;11780;11781;11782;11783;11784;11785;11786 8410;8411;8412;8413 8412 4 2364500 482670 GALTGGYYDTR TMDCITLEGDQVSHRGALTGGYYDTRKSRL VSHRGALTGGYYDTRKSRLELQKDVRKAEE R G A T R K 1 1 0 1 0 0 0 3 0 0 1 0 0 0 0 0 2 0 2 0 0 0 11 0 1172.5462 Q9UQE7 Q9UQE7 662 672 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 2.6225E-05 172.98 By MS/MS 3 0 1 1 3235000 3235000 0 4885 2860 5073 11787 8414 8414 1 84451 0 GALTLSSPEVR LNKLAKILKKRRIEKGALTLSSPEVRFHMD RIEKGALTLSSPEVRFHMDSETHDPIDLQT K G A V R F 1 1 0 0 0 0 1 1 0 0 2 0 0 0 1 2 1 0 0 1 0 0 11 0 1128.6139 Q9Y2L1 Q9Y2L1 628 638 DIS3 Exosome complex exonuclease RRP44 yes yes 2 9.3051E-05 162.88 By MS/MS 3.8 1.72 1 1 1 1 1 5 7681400 7681400 0 4886 2892 5074 11788;11789;11790;11791;11792 8415;8416 8416 2 188820 0 GALTTVEGLITR RIPELDFEIPAFSQKGALTTVEGLITRAIS SQKGALTTVEGLITRAISGLEQDQPARRAN K G A T R A 1 1 0 0 0 0 1 2 0 1 2 0 0 0 0 0 3 0 0 1 0 0 12 0 1229.698 O75312 O75312 141 152 ZPR1 Zinc finger protein ZPR1 yes yes 2 1.0458E-16 225.01 By MS/MS 6 0 1 1 2723000 2723000 0 4887 295 5075 11793 8417 8417 1 21234 0 GALVTVGQLSCYDQAK GLRRLFSGATMASSRGALVTVGQLSCYDQA ALVTVGQLSCYDQAKQLVLSTGYLSDNIFT R G A A K Q 2 0 0 1 1 2 0 2 0 0 2 1 0 0 0 1 1 0 1 2 0 0 16 0 1708.8454 Q9UBX3 Q9UBX3 171 186 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 2.5844E-50 327.62 By MS/MS 5.71 3.37 1 1 1 1 1 1 1 7 15717000 15717000 0 4888 2761 5076 11794;11795;11796;11797;11798;11799;11800 8418;8419 8419 2 1503300 0 GAMGIILVYDITDEK AGQERFKTITTAYYRGAMGIILVYDITDEK GAMGIILVYDITDEKSFENIQNWMKSIKEN R G A E K S 1 0 0 2 0 0 1 2 0 3 1 1 1 0 0 0 1 0 1 1 0 0 15 0 1636.8382 P51153 P51153 80 94 RAB13 Ras-related protein Rab-13 yes yes 2 3.9258E-07 158.05 By MS/MS 9 0 1 1 145910 145910 0 4889 962 5077 11801 8420 8420 726 1 83740 0 GANAVGYTNYPDNVVFK LRELIPNIPFQMLLRGANAVGYTNYPDNVV NAVGYTNYPDNVVFKFCEVAKENGMDVFRV R G A F K F 2 0 3 1 0 0 0 2 0 0 0 1 0 1 1 0 1 0 2 3 0 0 17 0 1827.8792 P11498 P11498 645 661 PC Pyruvate carboxylase, mitochondrial yes yes 2 2.1401E-25 228.7 By MS/MS 4 0.816 1 1 1 3 4046700 4046700 0 4890 555 5078 11802;11803;11804 8421 8421 1 118110 0 GANDFMCDEMER IKNTKARTSASIILRGANDFMCDEMERSLH ILRGANDFMCDEMERSLHDALCVVKRVLES R G A E R S 1 1 1 2 1 0 2 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 12 0 1473.5323 P17987 P17987 379 390 TCP1 T-complex protein 1 subunit alpha yes yes 2 3.9589E-33 263.3 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 23957000 23957000 0 4891 619 5079 11805;11806;11807;11808;11809;11810;11811;11812 8422;8423;8424 8424 3 262900 0 GANPVEIRR LARSIAKEGFEKISKGANPVEIRRGVMLAV FEKISKGANPVEIRRGVMLAVDAVIAELKK K G A R R G 1 2 1 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 1 1010.5621 P10809 P10809 134 142 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0098011 124.08 By MS/MS 7 2 1 1 1 1 1 1 1 7 128050000 128050000 0 4892 544 5080 11813;11814;11815;11816;11817;11818;11819 8425;8426;8427 8426 3 1294500 0 GANQWIK LGYHIYSSDPPFEVRGANQWIKFKSVS___ SDPPFEVRGANQWIKFKSVS__________ R G A I K F 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 7 0 815.42899 P08559 P08559 379 385 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.012813 146.21 By MS/MS 7 0 1 1 7846700 7846700 0 4893 504 5081 11820 8428 8428 1 140220 0 GAPANVSSSDLTGR SRVDRERKVSMRLHRGAPANVSSSDLTGRQ RGAPANVSSSDLTGRQEVSRIPASQTSVPF R G A G R Q 2 1 1 1 0 0 0 2 0 0 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1330.6477 P49674 P49674 383 396 CSNK1E Casein kinase I isoform epsilon yes yes 2 9.3603E-08 177.16 By MS/MS 7 0 1 1 866110 866110 0 4894 925 5082 11821 8429 8429 1 15477 0 GAPEGVIDR PNKPSRTSMSKMFVKGAPEGVIDRCTHIRV SKMFVKGAPEGVIDRCTHIRVGSTKVPMTS K G A D R C 1 1 0 1 0 0 1 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 912.46649 P16615;O14983 P16615 515 523 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 0.020116 96.668 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 5819600 5819600 0 4895 608 5083 11822;11823;11824;11825;11826;11827 8430;8431 8430 2 194110 0 GAPNPWLFEEPEETR PDLIRSSLMSEEAKRGAPNPWLFEEPEETR GAPNPWLFEEPEETRGLGFDEIRQQQQKII R G A T R G 1 1 1 0 0 0 4 1 0 0 1 0 0 1 3 0 1 1 0 0 0 0 15 0 1770.8213 Q9UNK0 Q9UNK0 119 133 STX8 Syntaxin-8 yes yes 2 0.0064315 100.38 By MS/MS 8.5 0.5 1 1 2 445990 445990 0 4896 2843 5084 11828;11829 8432 8432 1 166980 0 GAQATLSSTTK FVFLLDRGLDIYVWRGAQATLSSTTKARLF YVWRGAQATLSSTTKARLFAEKINKNERKG R G A T K A 2 0 0 0 0 1 0 1 0 0 1 1 0 0 0 2 3 0 0 0 0 0 11 0 1063.551 Q13045 Q13045 661 671 FLII Protein flightless-1 homolog yes yes 2 0.004331 110.54 By MS/MS 3 0 1 1 406540 406540 0 4897 1328 5085 11830 8433 8433 1 10613 0 GAQDVAGGSNPGAHNPSANLAR WFQPVANAADAEAVRGAQDVAGGSNPGAHN GSNPGAHNPSANLARGDNQAGGAAAAAAAP R G A A R G 5 1 3 1 0 1 0 4 1 0 1 0 0 0 2 2 0 0 0 1 0 0 22 0 2059.9784 O14654 O14654 1177 1198 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.4649E-06 127.49 By MS/MS By matching 3.6 0.8 3 1 1 4 1 4876300 4830600 45662 4898 118 5086 11831;11832;11833;11834;11835 8434;8435 8434 2 135330 65442 GAQGVILVYDVTR AGQERFRTLTPSYYRGAQGVILVYDVTRRD YRGAQGVILVYDVTRRDTFVKLDNWLNELE R G A T R R 1 1 0 1 0 1 0 2 0 1 1 0 0 0 0 0 1 0 1 3 0 0 13 0 1389.7616 Q9NP72 Q9NP72 80 92 RAB18 Ras-related protein Rab-18 yes yes 2 0.0078778 98.156 By MS/MS 8 1.41 1 1 1 1 1 5 24926000 24926000 0 4899 2573 5087 11836;11837;11838;11839;11840 8436 8436 1 825730 0 GAQTAAATAPR LPATTLGGACLQASRGAQTAAATAPRIKKF QASRGAQTAAATAPRIKKFAIYRWDPDKAG R G A P R I 5 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 11 0 1013.5254 P21912 P21912 28 38 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 8.3408E-05 164.33 By MS/MS 8 0 1 1 1308800 1308800 0 4900 651 5088 11841 8437 8437 1 86343 0 GASIVEDKLVEDLR DDPNFFKMVEGFFDRGASIVEDKLVEDLRT RGASIVEDKLVEDLRTRESEEQKRNRVRGI R G A L R T 1 1 0 2 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 2 0 0 14 1 1542.8253 P00367 P00367 77 90 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2;3 5.6664E-05 170.4 By MS/MS 6 0 2 2 23619000 23619000 0 4901 425 5089 11842;11843 8438;8439 8439 2 184180 0 GASKEILSEVER ITDCKDPKACTILLRGASKEILSEVERNLQ LLRGASKEILSEVERNLQDAMQVCRNVLLD R G A E R N 1 1 0 0 0 0 3 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 1 1316.6936 P49368 P49368 378 389 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00019287 184.03 By MS/MS 7 1.73 2 2 1 1 1 1 8 143070000 143070000 0 4902 916 5090 11844;11845;11846;11847;11848;11849;11850;11851 8440;8441;8442;8443;8444;8445 8442 6 1714700 0 GASSPLITVFTDDK IHPELEGVEIVISEKGASSPLITVFTDDKG KGASSPLITVFTDDKGAYSVGPLHSDLEYT K G A D K G 1 0 0 2 0 0 0 1 0 1 1 1 0 1 1 2 2 0 0 1 0 0 14 0 1449.7351 Q15155;P69849;Q5JPE7 Q15155 822 835 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 0.047708 70.488 By MS/MS 1 0 1 1 55720 55720 0 4903 1190 5091 11852 8446 8446 1 2722.4 0 GASVFQVK FWYLTSANIPSETLRGASVFQVKLGNQNVE IPSETLRGASVFQVKLGNQNVETKQLLSAS R G A V K L 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 8 0 834.45995 Q8WWC4 Q8WWC4 242 249 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.0079015 126.28 By MS/MS 9 0 1 1 1691400 1691400 0 4904 2037 5092 11853 8447 8447 1 970680 0 GATPEGIFLR GLVRENYVWNVLLHRGATPEGIFLRVPTAS VLLHRGATPEGIFLRVPTASYDLDLFTMTW R G A L R V 1 1 0 0 0 0 1 2 0 1 1 0 0 1 1 0 1 0 0 0 0 0 10 0 1059.5713 Q92538 Q92538 907 916 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0072207 101.25 By MS/MS 3 0.816 1 1 1 3 1107900 1107900 0 4905 2055 5093 11854;11855;11856 8448;8449 8449 2 29025 0 GATQQILDEAER FSGVALGEACTIVLRGATQQILDEAERSLH VLRGATQQILDEAERSLHDALCVLAQTVKD R G A E R S 2 1 0 1 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 12 0 1329.6525 P78371 P78371 377 388 CCT2 T-complex protein 1 subunit beta yes yes 2 3.1579E-69 311.02 By MS/MS By MS/MS 5.91 2.5 1 1 1 1 3 1 1 1 1 10 1 328160000 328080000 76922 4906 1195 5094 11857;11858;11859;11860;11861;11862;11863;11864;11865;11866;11867 8450;8451;8452;8453;8454;8455;8456;8457;8458;8459;8460 8457 11 3535600 235910 GATVDKTVCK WWTNTAHYNRERIRRGATVDKTVCKKNLGR ERIRRGATVDKTVCKKNLGRLTRLYLKAEQ R G A C K K 1 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 2 0 0 2 0 0 10 1 1077.5488 Q6P2Q9 Q6P2Q9 764 773 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.037495 107.21 By MS/MS 2 0 1 1 160920 160920 0 4907 1706 5095 11868 8461 8461 1 7998.4 0 GAVAIADAIR QVEVINFGDCLVRSKGAVAIADAIRGGLPK LVRSKGAVAIADAIRGGLPKLKELNLSFCE K G A I R G 4 1 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 10 0 955.54508 P46060 P46060 280 289 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.00097048 124.23 By MS/MS 6 0.816 1 1 1 3 5363900 5363900 0 4908 876 5096 11869;11870;11871 8462;8463 8463 2 158290 0 GAVAMAETLK LLRVINLNDNTFTEKGAVAMAETLKTLRQV TFTEKGAVAMAETLKTLRQVEVINFGDCLV K G A L K T 3 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 1 0 0 10 0 989.52157 P46060 P46060 252 261 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0033513 112.84 By MS/MS 6.17 1.07 2 2 1 1 6 7358000 7358000 0 4909 876 5097;5098 11872;11873;11874;11875;11876;11877 8464;8465;8466 8465 3 185420 0 GAVDAAVPTNIIAAK ______________________________ GAVDAAVPTNIIAAKAAEVRANKVNWQSYL R G A A K A 5 0 1 1 0 0 0 1 0 2 0 1 0 0 1 0 1 0 0 2 0 0 15 0 1409.7878 Q9UI12 Q9UI12 8 22 ATP6V1H V-type proton ATPase subunit H yes yes 2 0.0041944 107.34 By MS/MS 6 0 1 1 2061700 2061700 0 4910 2786 5099 11878 8467 8467 1 16077 0 GAVEAELDPVEYTLR ______________________________ GAVEAELDPVEYTLRKRLPSRLPRRPNDIY R G A L R K 2 1 0 1 0 0 3 1 0 0 2 0 0 0 1 0 1 0 1 2 0 0 15 0 1660.8308 O75817 O75817 9 23 POP7 Ribonuclease P protein subunit p20 yes yes 2 3.7177E-14 197.31 By MS/MS 9.5 0.5 1 1 2 1723900 1723900 0 4911 329 5100 11879;11880 8468;8469 8468 2 1204400 0 GAVGALLVYDIAK AGQERYRAITSAYYRGAVGALLVYDIAKHL YRGAVGALLVYDIAKHLTYENVERWLKELR R G A A K H 3 0 0 1 0 0 0 2 0 1 2 1 0 0 0 0 0 0 1 2 0 0 13 0 1288.7391 P62491;Q15907 P62491 83 95 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.01798 84.658 By MS/MS 9 0 1 1 155120 155120 0 4912 1136 5101 11881 8470 8470 1 89027 0 GAVIATELKNNSYK HCNGVDWRQKLDSQRGAVIATELKNNSYKL RGAVIATELKNNSYKLARWTCCALLAGSEY R G A Y K L 2 0 2 0 0 0 1 1 0 1 1 2 0 0 0 1 1 0 1 1 0 0 14 1 1506.8042 O15371 O15371 418 431 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 7.026E-18 231.07 By MS/MS By matching 6 0.707 1 2 1 3 1 11807000 11771000 36291 4913 172 5102 11882;11883;11884;11885 8471;8472 8472 2 97569 111300 GAVLFGLDPAVIK CRIIIPQDVGLTILKGAVLFGLDPAVIKVR LKGAVLFGLDPAVIKVRRSPLTYGVGVLNR K G A I K V 2 0 0 1 0 0 0 2 0 1 2 1 0 1 1 0 0 0 0 2 0 0 13 0 1298.7598 O43301 O43301 517 529 HSPA12A Heat shock 70 kDa protein 12A yes yes 2 0.004532 105.98 By MS/MS 5 0 1 1 151850 151850 0 4914 192 5103 11886 8473 8473 1 6241.7 0 GAVPLEMLEIALR NVKKSKQLLQKAVERGAVPLEMLEIALRNL ERGAVPLEMLEIALRNLNLQKKQLLSEEEK R G A L R N 2 1 0 0 0 0 2 1 0 1 3 0 1 0 1 0 0 0 0 1 0 0 13 0 1410.7905 P33981 P33981 173 185 TTK Dual specificity protein kinase TTK yes yes 2 0.0046672 99.568 By MS/MS 4 0 2 2 489680 489680 0 4915 772 5104;5105 11887;11888 8474;8475 8474 521 2 13368 0 GAVSAEQVIAGFNR NSGRAGKSSGSGAGKGAVSAEQVIAGFNRL KGAVSAEQVIAGFNRLRQEQRGLASKAAEL K G A N R L 3 1 1 0 0 1 1 2 0 1 0 0 0 1 0 1 0 0 0 2 0 0 14 0 1417.7314 Q9UHV9 Q9UHV9 19 32 PFDN2 Prefoldin subunit 2 yes yes 2;3 6.433E-12 215.08 By MS/MS 9.67 0.471 1 2 3 3933700 3933700 0 4916 2783 5106 11889;11890;11891 8476;8477;8478 8477 3 3791900 0 GAVTGHEECVDALLQHGAK NVDAKDKWGRTALHRGAVTGHEECVDALLQ GHEECVDALLQHGAKCLLRDSRGRTPIHLS R G A A K C 3 0 0 1 1 1 2 3 2 0 2 1 0 0 0 0 1 0 0 2 0 0 19 0 1990.9531 O15084 O15084 693 711 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 3 0.00099023 103.39 By MS/MS 4 0 1 1 917780 917780 0 4917 147 5107 11892 8479 8479 1 25054 0 GAVVVLNMVEASR LQALLLSSNQELQHRGAVVVLNMVEASREI HRGAVVVLNMVEASREIASTLMESEMMEIL R G A S R E 2 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 4 0 0 13 0 1343.7231 Q9H3U1 Q9H3U1 882 894 UNC45A Protein unc-45 homolog A yes yes 2 1.6069E-05 168.22 By MS/MS 4 0 1 1 1013000 1013000 0 4918 2493 5108 11893 8480 8480 1517 1 27654 0 GAVYSFDPVGSYQR YYVYNIIGGLDEEGKGAVYSFDPVGSYQRD KGAVYSFDPVGSYQRDSFKAGGSASAMLQP K G A Q R D 1 1 0 1 0 1 0 2 0 0 0 0 0 1 1 2 0 0 2 2 0 0 14 0 1544.726 P20618 P20618 147 160 PSMB1 Proteasome subunit beta type-1 yes yes 2 2.5959E-18 227.36 By MS/MS 9.5 0.5 1 1 2 5035000 5035000 0 4919 643 5109 11894;11895 8481 8481 1 2910400 0 GAWSNVLR WRKIARDEGGKAFFKGAWSNVLRGMGGAFV GGKAFFKGAWSNVLRGMGGAFVLVLYDEIK K G A L R G 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 8 0 901.477 P05141;P12235;P12236 P05141 273 280 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 1;2 0.0066277 131.03 By MS/MS By MS/MS 5.86 2.75 1 1 2 1 1 1 1 4 1 1 13 1 167380000 166650000 732750 4920 469;563;562 5110 11896;11897;11898;11899;11900;11901;11902;11903;11904;11905;11906;11907;11908;11909 8482;8483;8484;8485;8486;8487;8488;8489;8490;8491;8492;8493;8494;8495;8496;8497 8483 15 13219000 6251300 GAYDIFLNAK FQKDILIACRLNQKKGAYDIFLNAKEQNIV LNQKKGAYDIFLNAKEQNIVFNAETYSNLI K G A A K E 2 0 1 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 10 0 1110.571 P42704 P42704 1050 1059 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.2712E-05 175.51 By MS/MS 3.4 2.06 1 1 1 1 1 5 29415000 29415000 0 4921 854 5111 11910;11911;11912;11913;11914 8498;8499;8500 8498 3 771680 0 GAYQDRDKPAQIR PRSGATAGAAGGRGKGAYQDRDKPAQIRFS GKGAYQDRDKPAQIRFSNISAAKAVADAIR K G A I R F 2 2 0 2 0 2 0 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 13 2 1516.7746 P50991 P50991 22 34 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0029157 135.1 By MS/MS By matching 7.33 1.6 3 1 1 1 5 1 57225000 57178000 47348 4922 956 5112 11915;11916;11917;11918;11919;11920 8501;8502;8503 8501 3 1440800 145210 GCDVVVIPAGVPR VKGYLGPEQLPDCLKGCDVVVIPAGVPRKP LKGCDVVVIPAGVPRKPGMTRDDLFNTNAT K G C P R K 1 1 0 1 1 0 0 2 0 1 0 0 0 0 2 0 0 0 0 4 0 0 13 0 1337.7126 P40926 P40926 92 104 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0023346 142.36 By MS/MS 8 0 1 1 1956400 1956400 0 4923 832 5113 11921 8504 8504 1 129070 0 GCEVVVSGK ACYGVLRFIMESGAKGCEVVVSGKLRGQRA MESGAKGCEVVVSGKLRGQRAKSMKFVDGL K G C G K L 0 0 0 0 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 9 0 933.45897 P23396 P23396 133 141 RPS3 40S ribosomal protein S3 yes yes 2 0.038753 86.136 By MS/MS By MS/MS 9.25 0.829 1 1 2 3 1 314730 242850 71883 4924 668 5114 11922;11923;11924;11925 8505;8506 8506 2 190030 613250 GCHLLVATPGR YGGADIGQQIRDLERGCHLLVATPGRLVDM DLERGCHLLVATPGRLVDMMERGKIGLDFC R G C G R L 1 1 0 0 1 0 0 2 1 0 2 0 0 0 1 0 1 0 0 1 0 0 11 0 1179.6183 O00571;O15523 O00571 316 326 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 0.00049596 141.52 By MS/MS By matching 5 0 4 2 2 13132000 13096000 35814 4925 105 5115 11926;11927;11928;11929 8507;8508 8508 2 538310 105970 GCILTLVER ESENLHNADQPLRVRGCILTLVERMDEEFT QPLRVRGCILTLVERMDEEFTKIMQNTDPH R G C E R M 0 1 0 0 1 0 1 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1059.5747 Q99613;B5ME19 Q99613 442 450 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.00022853 162.25 By MS/MS 4 0.816 1 1 1 3 6157600 6157600 0 4926 2275 5116 11930;11931;11932 8509;8510 8509 2 167720 0 GCITIIGGGDTATCCAK GTKALMDEVVKATSRGCITIIGGGDTATCC ITIIGGGDTATCCAKWNTEDKVSHVSTGGG R G C A K W 2 0 0 1 3 0 0 4 0 3 0 1 0 0 0 0 3 0 0 0 0 0 17 0 1753.7797 P00558 P00558 366 382 PGK1 Phosphoglycerate kinase 1 yes yes 2 3.5683E-43 252.96 By MS/MS 7 0 1 1 1353700 1353700 0 4927 432 5117 11933 8511 8511 1 24191 0 GCLELIK ARGDLNDCFIPCTPKGCLELIKETGVPIAG CFIPCTPKGCLELIKETGVPIAGRHAVVVG K G C I K E 0 0 0 0 1 0 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 7 0 831.45242 P11586 P11586 151 157 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.015469 138.85 By MS/MS 4 0 1 1 875960 875960 0 4928 556 5118 11934 8512 8512 1 23913 0 GCLELIKETGVPIAGR ARGDLNDCFIPCTPKGCLELIKETGVPIAG CLELIKETGVPIAGRHAVVVGRSKIVGAPM K G C G R H 1 1 0 0 1 0 2 3 0 2 2 1 0 0 1 0 1 0 0 1 0 0 16 1 1711.9291 P11586 P11586 151 166 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 1.7346E-05 153.81 By MS/MS 4 0 2 2 3754300 3754300 0 4929 556 5119 11935;11936 8513;8514 8514 2 102490 0 GCLLYGPPGTGK TNPELFQRVGIIPPKGCLLYGPPGTGKTLL PPKGCLLYGPPGTGKTLLARAVASQLDCNF K G C G K T 0 0 0 0 1 0 0 4 0 0 2 1 0 0 2 0 1 0 1 0 0 0 12 0 1218.6067 P62333 P62333 169 180 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.0018746 123.35 By MS/MS 7.5 0.5 1 1 2 5039800 5039800 0 4930 1133 5120 11937;11938 8515 8515 1 103160 0 GCPEDAAVCAVDK FINICHRVLQEGKARGCPEDAAVCAVDKNG ARGCPEDAAVCAVDKNGSKNLGKFISSPMK R G C D K N 3 0 0 2 2 0 1 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 13 0 1390.5857 P11717 P11717 530 542 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0034033 112.13 By MS/MS 2 0 1 1 196290 196290 0 4931 557 5121 11939 8516 8516 1 9756.5 0 GCTALHYAVLADDYR EDDFNNRLNNRASFKGCTALHYAVLADDYR GCTALHYAVLADDYRTVKELLDGGANPLQR K G C Y R T 3 1 0 2 1 0 0 1 1 0 2 0 0 0 0 0 1 0 2 1 0 0 15 0 1723.7988 Q9H078 Q9H078 266 280 CLPB Caseinolytic peptidase B protein homolog yes yes 2 2.4095E-28 234.63 By MS/MS 6 0 1 1 15812000 15812000 0 4932 2448 5122 11940 8517 8517 1 123310 0 GCTATLGNFAK LLMMAGIDDCYTSARGCTATLGNFAKATFD TSARGCTATLGNFAKATFDAISKTYSYLTP R G C A K A 2 0 1 0 1 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 0 0 11 0 1138.5441 P15880 P15880 228 238 RPS2 40S ribosomal protein S2 yes yes 2 6.8335E-06 175.91 By MS/MS By matching 8 0 2 1 1 14176000 14114000 62743 4933 602 5123 11941;11942 8518 8518 1 931080 535270 GCTDCGWGLAR QLVQRGWGSALAAARGCTDCGWGLARRGLA AAARGCTDCGWGLARRGLAEHAHLAPPELL R G C A R R 1 1 0 1 2 0 0 3 0 0 1 0 0 0 0 0 1 1 0 0 0 0 11 0 1251.5125 P27544 P27544 36 46 CERS1 Ceramide synthase 1 yes yes 2 0.0011603 131.5 By MS/MS 1.5 0.5 1 1 2 506510 506510 0 4934 706 5124 11943;11944 8519 8519 1 24859 0 GCTDNLTLTVAR NTSNMTHLEAQNRIKGCTDNLTLTVARSEH RIKGCTDNLTLTVARSEHKVWSPLVTEEGK K G C A R S 1 1 1 1 1 0 0 1 0 0 2 0 0 0 0 0 3 0 0 1 0 0 12 0 1319.6503 O00151 O00151 72 83 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.01137 95.483 By MS/MS 7 0 1 1 848640 848640 0 4935 71 5125 11945 8520 8520 1 15165 0 GCVQTLVEK ALAIADLALQMPSWKGCVQTLVEKYSNDVT QMPSWKGCVQTLVEKYSNDVTSLPFLLEIL K G C E K Y 0 0 0 0 1 1 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 9 0 1032.5274 Q9Y5L0 Q9Y5L0 124 132 TNPO3 Transportin-3 yes yes 2 0.0050027 115.71 By MS/MS 4 0 1 1 847110 847110 0 4936 2974 5126 11946 8521 8521 1 23125 0 GDADMYDLPK SAASSYSFSDLNSTRGDADMYDLPKKEDAL LNSTRGDADMYDLPKKEDALLYQSKGYNDD R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 P50402 P50402 69 78 EMD Emerin yes yes 2 0.008668 100.25 By MS/MS 8 0 1 1 1000700 1000700 0 4937 945 5127 11947 8522 8522 1 66017 0 GDADMYDLPKKEDALLYQSK SAASSYSFSDLNSTRGDADMYDLPKKEDAL YDLPKKEDALLYQSKGYNDDYYEESYFTTR R G D S K G 2 0 0 4 0 1 1 1 0 0 3 3 1 0 1 1 0 0 2 0 0 0 20 2 2299.1042 P50402 P50402 69 88 EMD Emerin yes yes 3 0.011842 71.637 By MS/MS 7.5 0.5 1 1 2 2878700 2878700 0 4938 945 5128 11948;11949 8523 8523 699 1 174430 0 GDAHECFVSPVAK DVDGVTDINLGKLVRGDAHECFVSPVAKAV VRGDAHECFVSPVAKAVIELLEKSGVNLDG R G D A K A 2 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 0 0 2 0 0 13 0 1415.6503 Q6UB35 Q6UB35 193 205 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00038163 138.99 By MS/MS By MS/MS 4 0 2 1 1 1635300 1597500 37791 4939 1726 5129 11950;11951 8524;8525 8525 2 43611 78967 GDDLSTAILK ______________________________ GADSKGDDLSTAILKQKNRPNRLIVDEAIN K G D L K Q 1 0 0 2 0 0 0 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 0 1031.5499 P55072 P55072 9 18 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00075859 134.05 By MS/MS By matching 4 0 2 1 1 1191700 1148500 43277 4940 1026 5130 11952;11953 8526 8526 1 31352 90431 GDDSEWLKLPVDQK ______________________________ MGDDSEWLKLPVDQKCEHKLWKARLSGYEE M G D Q K C 0 0 0 3 0 1 1 1 0 0 2 2 0 0 1 1 0 1 0 1 0 0 14 1 1628.8046 Q14008 Q14008 2 15 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.7998E-17 218.75 By MS/MS 2 0 1 1 231320 231320 0 4941 1405 5131 11954 8527 8527 1 11498 0 GDECELLGHSK GTVVTGTLERGILKKGDECELLGHSKNIRT ILKKGDECELLGHSKNIRTVVTGIEMFHKS K G D S K N 0 0 0 1 1 0 2 2 1 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1243.5503 P49411 P49411 287 297 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 0.00027667 151.83 By MS/MS 7.17 0.687 1 3 2 6 24697000 24697000 0 4942 918 5132 11955;11956;11957;11958;11959;11960 8528;8529;8530;8531 8529 4 485010 0 GDECGLALGR AKRIVVKLGSAVVTRGDECGLALGRLASIV AVVTRGDECGLALGRLASIVEQVSVLQNQG R G D G R L 1 1 0 1 1 0 1 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1046.4815 P54886 P54886 85 94 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.00030845 152.47 By MS/MS 4.75 2.28 1 1 1 1 4 28737000 28737000 0 4943 1019 5133 11961;11962;11963;11964 8532;8533;8534 8533 3 926280 0 GDETFAVLSR MYQWIEQDMEKYILRGDETFAVLSRLVAHG KYILRGDETFAVLSRLVAHGKQLFLITNSP R G D S R L 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1093.5404 Q9H857 Q9H857 247 256 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.00016083 158.76 By MS/MS 6.5 0.5 1 1 2 2492900 2492900 0 4944 2522 5134 11965;11966 8535 8535 1 21129 0 GDFCIEVGK IGATNPADAPPGTIRGDFCIEVGKNLIHGS PPGTIRGDFCIEVGKNLIHGSDSVESARRE R G D G K N 0 0 0 1 1 0 1 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 9 0 1023.4695 Q13232 Q13232 123 131 NME3 Nucleoside diphosphate kinase 3 yes yes 2 0.0092599 106.42 By MS/MS 10 0 1 1 183880 183880 0 4945 1349 5135 11967 8536 8536 1 195450 0 GDFCIQVGR LGETNPADSKPGTIRGDFCIQVGRNIIHGS KPGTIRGDFCIQVGRNIIHGSDSVKSAEKE R G D G R N 0 1 0 1 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1050.4917 P15531;P22392;O60361 P22392 106 114 NME1;NME2;NME2P1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase no no 2 0.00066472 149.65 By MS/MS 9.5 0.5 1 1 2 5013600 5013600 0 4946 659;599 5136 11968;11969 8537;8538 8537 2 5112900 0 GDFDENLNYPEQK YDYLKTLAGDVHIVRGDFDENLNYPEQKVV VRGDFDENLNYPEQKVVTVGQFKIGLIHGH R G D Q K V 0 0 2 2 0 1 2 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 13 0 1567.6791 Q9UBQ0 Q9UBQ0 61 73 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 2 3.9131E-12 209.8 By MS/MS 9 0 1 1 1099100 1099100 0 4947 2754 5137 11970 8539 8539 1 630790 0 GDFILVGDLMR CNHYNNIMALYLKTKGDFILVGDLMRSVLL LKTKGDFILVGDLMRSVLLLAYKPMEGNFE K G D M R S 0 1 0 2 0 0 0 2 0 1 2 0 1 1 0 0 0 0 0 1 0 0 11 0 1234.638 Q16531 Q16531 918 928 DDB1 DNA damage-binding protein 1 yes yes 2 0.0066513 101.38 By MS/MS 4 0 1 1 42413 42413 0 4948 1537 5138 11971 8540 8540 1 1157.8 0 GDFIPGLR TSVERAAASTDYYKRGDFIPGLRVDGMDIL STDYYKRGDFIPGLRVDGMDILCVREATRF R G D L R V 0 1 0 1 0 0 0 2 0 1 1 0 0 1 1 0 0 0 0 0 0 0 8 0 873.47085 P08559 P08559 246 253 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.048564 91.906 By MS/MS 7.5 0.5 1 1 2 4912800 4912800 0 4949 504 5139 11972;11973 8541 8541 1 97582 0 GDFITIGSR EDFLNICIEPDTISKGDFITIGSRKVRNPK PDTISKGDFITIGSRKVRNPKLHVEGTECL K G D S R K 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 Q53H12 Q53H12 343 351 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.00051691 169.12 By MS/MS By matching 7 0 2 1 1 11258000 11229000 29533 4950 1587 5140 11974;11975 8542 8542 1 200660 121240 GDFLALDLGGTNFR MLPTYVCATPDGTEKGDFLALDLGGTNFRV KGDFLALDLGGTNFRVLLVRVRNGKWGGVE K G D F R V 1 1 1 2 0 0 0 3 0 0 3 0 0 2 0 0 1 0 0 0 0 0 14 0 1494.7467 P52789;P52790 P52789 526 539 HK2;HK3 Hexokinase-2;Hexokinase-3 yes no 2 7.9072E-26 243.91 By MS/MS 4 0 1 1 567150 567150 0 4951 992 5141 11976 8543 8543 1 15483 0 GDFYTAHGEDALLAAR GMPEKPTTTVRLFDRGDFYTAHGEDALLAA DFYTAHGEDALLAAREVFKTQGVIKYMGPA R G D A R E 4 1 0 2 0 0 1 2 1 0 2 0 0 1 0 0 1 0 1 0 0 0 16 0 1705.806 P43246 P43246 40 55 MSH2 DNA mismatch repair protein Msh2 yes yes 3 0.031067 63.212 By MS/MS 4 0 1 1 528100 528100 0 4952 862 5142 11977 8544 8544 1 14417 0 GDGPICLVLAPTR LPAIVHINHQPFLERGDGPICLVLAPTREL ERGDGPICLVLAPTRELAQQVQQVAAEYCR R G D T R E 1 1 0 1 1 0 0 2 0 1 2 0 0 0 2 0 1 0 0 1 0 0 13 0 1367.7231 Q92841;P17844 P17844 165 177 DDX17;DDX5 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 2 0.0016287 123.62 By MS/MS 5 1.41 1 1 1 1 1 5 4543200 4543200 0 4953 616;2082 5143 11978;11979;11980;11981;11982 8545 8545 1 160950 0 GDGQFFAVSVVCPETGAR SALPWDDHRPQVTWRGDGQFFAVSVVCPET QFFAVSVVCPETGARKVRVWNREFALQSTS R G D A R K 2 1 0 1 1 1 1 3 0 0 0 0 0 2 1 1 1 0 0 3 0 0 18 0 1895.8836 O95163 O95163 202 219 IKBKAP Elongator complex protein 1 yes yes 2 1.5416E-18 197.06 By MS/MS 2 0.816 1 1 1 3 730670 730670 0 4954 368 5144 11983;11984;11985 8546;8547 8547 2 22347 0 GDHAWSFLK ______________________________ ______________________________ M G D L K D 1 0 0 1 0 0 0 1 1 0 1 1 0 1 0 1 0 1 0 0 0 0 9 0 1059.5138 P12235 P12235 2 10 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.0073524 96.948 By MS/MS 8 0 1 1 645440 645440 0 4955 562 5145 11986 8548 8548 1 42580 0 GDHWTTR NKLKGQKIVSCRICKGDHWTTRCPYKDTLG IVSCRICKGDHWTTRCPYKDTLGPMQKELA K G D T R C 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 7 0 871.39366 O75821 O75821 162 168 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.02681 117.16 By MS/MS 7 0 1 1 1491700 1491700 0 4956 330 5146 11987 8549 8549 1 26658 0 GDIDHVK GPDTYLALLNAYAEKGDIDHVKQTLEKVEK LLNAYAEKGDIDHVKQTLEKVEKSELHLMD K G D V K Q 0 0 0 2 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 782.39227 P42704 P42704 281 287 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.015689 138.24 By MS/MS By matching 3 0 2 1 1 1667800 1649100 18743 4957 854 5147 11988;11989 8550 8550 1 43050 26862 GDIDHVKQTLEK GPDTYLALLNAYAEKGDIDHVKQTLEKVEK AEKGDIDHVKQTLEKVEKSELHLMDRDLLQ K G D E K V 0 0 0 2 0 1 1 1 1 1 1 2 0 0 0 0 1 0 0 1 0 0 12 1 1381.7201 P42704 P42704 281 292 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.012635 125.23 By MS/MS 3 0 2 2 1728600 1728600 0 4958 854 5148 11990;11991 8551;8552 8552 2 45125 0 GDIFLVR YLKPYFLEAYRPIRKGDIFLVRGGMRAVEF EAYRPIRKGDIFLVRGGMRAVEFKVVETDP K G D V R G 0 1 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 7 0 818.46504 P55072 P55072 149 155 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.03532 111.28 By MS/MS 6 2.16 1 1 1 3 3140100 3140100 0 4959 1026 5149 11992;11993;11994 8553;8554 8554 2 182340 0 GDINILLIGDPSVAK LGGVERDLENGSHIRGDINILLIGDPSVAK GDINILLIGDPSVAKSQLLRYVLCTAPRAI R G D A K S 1 0 1 2 0 0 0 2 0 3 2 1 0 0 1 1 0 0 0 1 0 0 15 0 1523.8559 P25205 P25205 337 351 MCM3 DNA replication licensing factor MCM3 yes yes 2 1.2821E-14 208.51 By MS/MS 4.5 1.12 1 1 1 1 4 3817100 3817100 0 4960 683 5150 11995;11996;11997;11998 8555;8556;8557 8555 3 90694 0 GDINLLMLGDPGTAK FGGSRKRLPDGLTRRGDINLLMLGDPGTAK GDINLLMLGDPGTAKSQLLKFVEKCSPIGV R G D A K S 1 0 1 2 0 0 0 3 0 1 3 1 1 0 1 0 1 0 0 0 0 0 15 0 1513.781 P33992 P33992 373 387 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.011481 91.123 By MS/MS 5 0 1 1 154930 154930 0 4961 774 5151 11999 8558 8558 1 6368.4 0 GDINPNIPYPTR IDSLQLGYAEDGHCKGDINPNIPYPTRLQW HCKGDINPNIPYPTRLQWDIPGECQEVIET K G D T R L 0 1 2 1 0 0 0 1 0 2 0 0 0 0 3 0 1 0 1 0 0 0 12 0 1355.6834 P50416 P50416 506 517 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 2 0.00053364 143.79 By MS/MS 3 2 1 1 2 720880 720880 0 4962 946 5152 12000;12001 8559;8560 8559 2 29631 0 GDINVCIVGDPSTAK FGGVPKTTGEGTSLRGDINVCIVGDPSTAK GDINVCIVGDPSTAKSQFLKHVEEFSPRAV R G D A K S 1 0 1 2 1 0 0 2 0 2 0 1 0 0 1 1 1 0 0 2 0 0 15 0 1544.7505 Q14566 Q14566 388 402 MCM6 DNA replication licensing factor MCM6 yes yes 2 5.5761E-07 158.58 By MS/MS 4 0 1 1 2406500 2406500 0 4963 1436 5153 12002 8561 8561 1 65695 0 GDINVLLCGDPGTAK FGGEPKNPGGKHKVRGDINVLLCGDPGTAK GDINVLLCGDPGTAKSQFLKYIEKVSSRAI R G D A K S 1 0 1 2 1 0 0 3 0 1 2 1 0 0 1 0 1 0 0 1 0 0 15 0 1528.7555 P49736 P49736 515 529 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00012289 135.81 By MS/MS 3 1.41 1 1 1 1 1 5 3089700 3089700 0 4964 928 5154 12003;12004;12005;12006;12007 8562;8563 8563 2 88843 0 GDKAQIEK EVIVTKDDAMLLKGKGDKAQIEKRIQEIIE AMLLKGKGDKAQIEKRIQEIIEQLDVTTSE K G D E K R 1 0 0 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 8 1 887.47125 P10809 P10809 362 369 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.015943 132.76 By MS/MS 6 0 1 1 0 0 0 4965 544 5155 12008 8564 8564 1 0 0 GDKAQIEKR EVIVTKDDAMLLKGKGDKAQIEKRIQEIIE MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY K G D K R I 1 1 0 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1043.5724 P10809 P10809 362 370 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.0017884 117.71 By MS/MS 6.75 0.829 2 1 1 4 18219000 18219000 0 4966 544 5156 12009;12010;12011;12012 8565;8566 8566 2 148460 0 GDLCAISLVGNR PGLVMPPAGLPQVQKGDLCAISLVGNRAPV VQKGDLCAISLVGNRAPVAIGVAAMSTAEM K G D N R A 1 1 1 1 1 0 0 2 0 1 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1273.6449 P41214 P41214 130 141 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.046661 75.509 By MS/MS 5 0 1 1 725750 725750 0 4967 837 5157 12013 8567 8567 1 29831 0 GDLGIEIPAEK FDEILEASDGIMVARGDLGIEIPAEKVFLA MVARGDLGIEIPAEKVFLAQKMMIGRCNRA R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 P14618;P30613 P14618 295 305 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2 0.021899 97.597 By MS/MS By matching 5 2.35 1 2 1 3 1 20188000 20140000 48243 4968 588 5158 12014;12015;12016;12017 8568;8569 8569 2 198670 147960 GDLGIEIPAEKVFLAQK FDEILEASDGIMVARGDLGIEIPAEKVFLA LGIEIPAEKVFLAQKMMIGRCNRAGKPVIC R G D Q K M 2 0 0 1 0 1 2 2 0 2 2 2 0 1 1 0 0 0 0 1 0 0 17 1 1827.0142 P14618;P30613 P14618 295 311 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2;3 6.4471E-06 172.33 By MS/MS 6.33 0.471 2 1 3 5594700 5594700 0 4969 588 5159 12018;12019;12020 8570;8571 8571 2 44173 0 GDLLFLTNR IVVVLSGSMEPAFHRGDLLFLTNRVEDPIR EPAFHRGDLLFLTNRVEDPIRVGEIVVFRI R G D N R V 0 1 1 1 0 0 0 1 0 0 3 0 0 1 0 0 1 0 0 0 0 0 9 0 1047.5713 P67812 P67812 64 72 SEC11A Signal peptidase complex catalytic subunit SEC11A yes yes 2 0.00011862 176.6 By MS/MS 9.5 0.5 1 1 2 809700 809700 0 4970 1183 5160 12021;12022 8572 8572 1 474770 0 GDLNDCFIPCTPK DVDGLTSINAGRLARGDLNDCFIPCTPKGC ARGDLNDCFIPCTPKGCLELIKETGVPIAG R G D P K G 0 0 1 2 2 0 0 1 0 1 1 1 0 1 2 0 1 0 0 0 0 0 13 0 1535.6748 P11586 P11586 138 150 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 7.1269E-06 174.24 By MS/MS 4.5 1.12 1 1 1 1 4 7481000 7481000 0 4971 556 5161 12023;12024;12025;12026 8573 8573 1 196330 0 GDLSTALEVAIDCYEK STNISFPLVTVHLEKGDLSTALEVAIDCYE DLSTALEVAIDCYEKYKVLPRIHDVLCKLV K G D E K Y 2 0 0 2 1 0 2 1 0 1 2 1 0 0 0 1 1 0 1 1 0 0 16 0 1782.8346 P42704 P42704 836 851 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 5.1172E-10 212.9 By MS/MS 3.33 0.471 2 1 3 692260 692260 0 4972 854 5162 12027;12028;12029 8574;8575 8574 2 18133 0 GDNITLLQSVSN SKTKSRKQLGRIMLKGDNITLLQSVSN___ MLKGDNITLLQSVSN_______________ K G D S N - 0 0 2 1 0 1 0 1 0 1 2 0 0 0 0 2 1 0 0 1 0 0 12 0 1259.6357 P62304 P62304 81 92 SNRPE Small nuclear ribonucleoprotein E yes yes 2 2.7637E-05 170.89 By MS/MS 10 0 1 1 394480 394480 0 4973 1128 5163 12030 8576 8576 1 419290 0 GDNLETLVLLNPSDK TFSSIVKGQRSLHHRGDNLETLVLLNPSDK GDNLETLVLLNPSDKSLYDELRNLLLDPAS R G D D K S 0 0 2 2 0 0 1 1 0 0 4 1 0 0 1 1 1 0 0 1 0 0 15 0 1626.8465 Q66K74 Q66K74 82 96 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 1.9327E-14 248.36 By MS/MS 3.5 0.5 1 1 2 559850 559850 0 4974 1670 5164 12031;12032 8577 8577 1 14754 0 GDNQAGGAAAAAAAPEPPPR GSNPGAHNPSANLARGDNQAGGAAAAAAAP GGAAAAAAAPEPPPRSRRVPRPPEREDSDN R G D P R S 8 1 1 1 0 1 1 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 20 0 1787.8551 O14654 O14654 1199 1218 IRS4 Insulin receptor substrate 4 yes yes 2 1.7713E-24 205.33 By MS/MS 4 2 1 1 1 1 1 1 1 7 2649700 2649700 0 4975 118 5165 12033;12034;12035;12036;12037;12038;12039 8578;8579 8579 2 70314 0 GDNRLDLLK NGSEQGGVLLLENPKGDNRLDLLKLKSVVT LLENPKGDNRLDLLKLKSVVTSIFGVKNTE K G D L K L 0 1 1 2 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 1 1042.5771 P41252 P41252 1105 1113 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.0047187 131.62 By MS/MS 3 0 1 1 918310 918310 0 4976 840 5166 12040 8580 8580 1 23973 0 GDPGDQTKAEGSSTASSGSQLAEGK IGWEKTGSHSEPQARGDPGDQTKAEGSSTA GSSTASSGSQLAEGKGSQMGTVQPIPCLLS R G D G K G 3 0 0 2 0 2 2 5 0 0 1 2 0 0 1 5 2 0 0 0 0 0 25 1 2364.0677 Q9NZB2 Q9NZB2 495 519 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 3 0.0057428 43.684 By MS/MS 3 0 1 1 148790 148790 0 4977 2709 5167 12041 8581 8581 1 3884 0 GDPQVYEELFSYSCPK QLREKYGDKMLRMQKGDPQVYEELFSYSCP DPQVYEELFSYSCPKFLSPVVPNYDNVHPN K G D P K F 0 0 0 1 1 1 2 1 0 0 1 1 0 1 2 2 0 0 2 1 0 0 16 0 1917.8455 Q9Y262 Q9Y262 404 419 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 2.2011E-10 188.09 By MS/MS 5.5 0.5 1 1 2 8793400 8793400 0 4978 2868 5168 12042;12043 8582;8583 8582 2 104370 0 GDPYPQEVSATVQK ILFSAHSLPMSVVNRGDPYPQEVSATVQKV RGDPYPQEVSATVQKVMERLEYCNPYRLVW R G D Q K V 1 0 0 1 0 2 1 1 0 0 0 1 0 0 2 1 1 0 1 2 0 0 14 0 1517.7362 P22830 P22830 273 286 FECH Ferrochelatase, mitochondrial yes yes 2 2.2265E-05 158.11 By MS/MS 7 0 1 1 4752800 4752800 0 4979 663 5169 12044 8584 8584 1 84934 0 GDQPAASGDSDDDEPPPLPR LLLGLCIFLLYKIVRGDQPAASGDSDDDEP ASGDSDDDEPPPLPRLKRRDFTPAELRRFD R G D P R L 2 1 0 5 0 1 1 2 0 0 1 0 0 0 5 2 0 0 0 0 0 0 20 0 2034.8767 O00264 O00264 48 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 6.2091E-63 287.43 By MS/MS 9.5 0.5 1 1 2 2543800 2543800 0 4980 85 5170 12045;12046 8585;8586 8585 2 1496100 0 GDREQLLQR ______________________________ ______________________________ M G D Q R A 0 2 0 1 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 1 1113.5891 Q04917 Q04917 2 10 YWHAH 14-3-3 protein eta yes yes 2 0.00063165 162.49 By MS/MS By matching 8.75 0.829 2 1 1 3 1 26770000 26686000 83521 4981 1268 5171 12047;12048;12049;12050 8587 8587 1 2046900 712530 GDSVIVVLR KPVNKDRYISKMFLRGDSVIVVLRNPLIAG SKMFLRGDSVIVVLRNPLIAGK________ R G D L R N 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 3 0 0 9 0 956.56548 P62316 P62316 103 111 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.00048103 153.78 By MS/MS 10 0 1 1 651780 651780 0 4982 1130 5172 12051 8588 8588 1 692770 0 GDTAKPYFVK ______________________________ ______________________________ M G D V K R 1 0 0 1 0 0 0 1 0 0 0 2 0 1 1 0 1 0 1 1 0 0 10 1 1124.5866 Q5VYS8 Q5VYS8 2 11 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 0.018975 101.72 By MS/MS 2 0 1 1 150250 150250 0 4983 1658 5173 12052 8589;8590 8589 2 7468.1 0 GDTGVFLQYTHAR LSDYKFSWDRVFQSRGDTGVFLQYTHARLH SRGDTGVFLQYTHARLHSLEETFGCGYLND R G D A R L 1 1 0 1 0 1 0 2 1 0 1 0 0 1 0 0 2 0 1 1 0 0 13 0 1463.7157 Q5T160 Q5T160 457 469 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 1.4747E-34 252.97 By MS/MS 6 0 1 1 3383600 3383600 0 4984 1624 5174 12053 8591 8591 1 26385 0 GDTPGHATPGHGGATSSAR PTPSHTPAGAATPGRGDTPGHATPGHGGAT GHATPGHGGATSSARKNRWDETPKTERDTP R G D A R K 3 1 0 1 0 0 0 5 2 0 0 0 0 0 2 2 3 0 0 0 0 0 19 0 1732.7877 O75533 O75533 271 289 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.00075686 107.69 By MS/MS By matching 3 0 2 1 1 800270 774550 25719 4985 315 5175 12054;12055 8592 8592 1 20220 36860 GDTVLLK VSLSQPKMDELQLFRGDTVLLKGKKRREAV MDELQLFRGDTVLLKGKKRREAVCIVLSDD R G D L K G 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 7 0 744.43815 P55072 P55072 54 60 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.021538 122.15 By MS/MS 4.5 0.5 1 1 2 2384300 2384300 0 4986 1026 5176 12056;12057 8593 8593 1 68493 0 GDTVSASPCSAPLAR DEDENEAVGQPGGPRGDTVSASPCSAPLAR GDTVSASPCSAPLARASSLEDLVLKEASTA R G D A R A 3 1 0 1 1 0 0 1 0 0 1 0 0 0 2 3 1 0 0 1 0 0 15 0 1487.7038 Q15477 Q15477 239 253 SKIV2L Helicase SKI2W yes yes 2 0.00027398 167.84 By MS/MS 2 0.816 1 1 1 3 852810 852810 0 4987 1506 5177 12058;12059;12060 8594 8594 1 23881 0 GDVAVVR SSALLTRTHINYGVKGDVAVVRINSPNSKV THINYGVKGDVAVVRINSPNSKVNTLSKEL K G D V R I 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 7 0 714.40244 P40939 P40939 47 53 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.031349 114.02 By MS/MS 2.75 1.48 1 1 1 1 4 17816000 17816000 0 4988 835 5178 12061;12062;12063;12064 8595 8595 1 544910 0 GDVEAFAK CQFGLPAEAVEAANKGDVEAFAKAMQNNAK AVEAANKGDVEAFAKAMQNNAKPEQKEGDT K G D A K A 2 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 8 0 835.40758 Q16186 Q16186 372 379 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 0.012155 116.9 By MS/MS 7 0 1 1 1300800 1300800 0 4989 1531 5179 12065 8596 8596 1 23246 0 GDVEEDETIPDSEQDIRPR VNGMKYSDIDIILLKGDVEEDETIPDSEQD EDETIPDSEQDIRPRFHRSRTVAQQHDEDG K G D P R F 0 2 0 4 0 1 4 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 19 1 2198.9927 Q92973 Q92973 328 346 TNPO1 Transportin-1 yes yes 3 0.00095675 101.01 By MS/MS 4 0 1 1 2283200 2283200 0 4990 2093 5180 12066 8597 8597 1 62330 0 GDVENIEVVQK SRLAVTRVIQALAMKGDVENIEVVQKMLNG LAMKGDVENIEVVQKMLNGLEDSIGLSKMV K G D Q K M 0 0 1 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 0 3 0 0 11 0 1228.6299 P42704 P42704 1153 1163 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 9.9399E-07 178.08 By MS/MS By MS/MS 3.5 0.5 1 1 1 1 1771500 1671100 100380 4991 854 5181 12067;12068 8598;8599 8599 2 45620 143870 GDVGSADIQDLEK PLKVEFLECSAKGGRGDVGSADIQDLEKWL GRGDVGSADIQDLEKWLAKIA_________ R G D E K W 1 0 0 3 0 1 1 2 0 1 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1345.6361 Q9Y5M8 Q9Y5M8 253 265 SRPRB Signal recognition particle receptor subunit beta yes yes 2 2.5322E-25 240.85 By MS/MS By matching 8.75 0.829 2 1 1 3 1 24536000 24444000 91952 4992 2976 5182 12069;12070;12071;12072 8600;8601 8600 2 4019900 784470 GDVSNLDPNFSFEGTK ALALIILLGFVQIGKGDVSNLDPNFSFEGT DVSNLDPNFSFEGTKLDVGNIVLALYSGLF K G D T K L 0 0 2 2 0 0 1 2 0 0 1 1 0 2 1 2 1 0 0 1 0 0 16 0 1725.7846 Q01650 Q01650 222 237 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 2 1.6807E-06 155.14 By MS/MS 7 0 1 1 1996200 1996200 0 4993 1243 5183 12073 8602 8602 1 35672 0 GDVTAQIALQPALK NLNVTEEKYQEALAKGDVTAQIALQPALKF KGDVTAQIALQPALKFNGGGHINHSIFWTN K G D L K F 3 0 0 1 0 2 0 1 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1423.8035 P04179 P04179 76 89 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 2 4.1665E-12 203.03 By MS/MS 9 0 1 1 959030 959030 0 4994 446 5184 12074 8603 8603 1 550390 0 GDVTITNDGATILK SLGPKGMDKMIQDGKGDVTITNDGATILKQ KGDVTITNDGATILKQMQVLHPAARMLVEL K G D L K Q 1 0 1 2 0 0 0 2 0 2 1 1 0 0 0 0 3 0 0 1 0 0 14 0 1416.746 P50991 P50991 66 79 CCT4 T-complex protein 1 subunit delta yes yes 2 3.3358E-12 250.51 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 96374000 96266000 108610 4995 956 5185 12075;12076;12077;12078;12079;12080 8604;8605;8606;8607;8608 8608 5 3425900 333100 GDVVLQSDHVIETLTK SLFVLHVQRADNKQKGDVVLQSDHVIETLT DVVLQSDHVIETLTKTALSANRVNSININQ K G D T K T 0 0 0 2 0 1 1 1 1 1 2 1 0 0 0 1 2 0 0 3 0 0 16 0 1752.9258 O00159 O00159 990 1005 MYO1C Unconventional myosin-Ic yes yes 2 4.5888E-06 149.32 By MS/MS 4 0 1 1 507520 507520 0 4996 72 5186 12081 8609 8609 1 13855 0 GDVVPKDVNAAIATIK DPRHGKYMACCLLYRGDVVPKDVNAAIATI DVVPKDVNAAIATIKTKRSIQFVDWCPTGF R G D I K T 3 0 1 2 0 0 0 1 0 2 0 2 0 0 1 0 1 0 0 3 0 0 16 1 1609.9039 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 P68363 321 336 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 3 0.0036688 97.579 By MS/MS 6 0 1 1 0 0 0 4997 1185;1754;2314 5187 12082 8610 8610 1 0 0 GDYPLEAVR LDGADCIMLSGETAKGDYPLEAVRMQHLIA SGETAKGDYPLEAVRMQHLIAREAEAAIYH K G D V R M 1 1 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 9 0 1018.5084 P14618 P14618 368 376 PKM Pyruvate kinase PKM yes yes 2 0.0016822 133.23 By MS/MS By matching 6.33 0.471 2 1 2 1 5874300 5845800 28551 4998 588 5188 12083;12084;12085 8611 8611 1 51099 87563 GEAAPGQGQAAVK AESRYLRTWLEPAPRGEAAPGQGQAAVKAE PRGEAAPGQGQAAVKAEPLLGAPGELLKQG R G E V K A 4 0 0 0 0 2 1 3 0 0 0 1 0 0 1 0 0 0 0 1 0 0 13 0 1182.5993 P17482 P17482 105 117 HOXB9 Homeobox protein Hox-B9 yes yes 2 0.0044986 106.16 By MS/MS 8 0 1 1 324640 324640 0 4999 613 5189 12086 8612 8612 1 21416 0 GEADILAALK TLRRDRDKIQGFQAKGEADILAALKKLQDQ GFQAKGEADILAALKKLQDQRQYIVAEFEQ K G E L K K 3 0 0 1 0 0 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 999.56006 Q12899 Q12899 170 179 TRIM26 Tripartite motif-containing protein 26 yes yes 2 0.00038236 149.57 By MS/MS 5 0 1 1 217690 217690 0 5000 1312 5190 12087 8613 8613 1 8948.1 0 GEALSALDSK VQRIMVANIEEVLQRGEALSALDSKANNLS EVLQRGEALSALDSKANNLSSLSKKYRQDA R G E S K A 2 0 0 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 0 989.50294 O75396 O75396 160 169 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0001838 157.34 By MS/MS 9.5 0.5 1 1 2 3750600 3750600 0 5001 304 5191 12088;12089 8614 8614 1 2178400 0 GEAPGAETPSLR PSQPSAAMAATDSMRGEAPGAETPSLRHRG SMRGEAPGAETPSLRHRGQAAQPEPSTGFT R G E L R H 2 1 0 0 0 0 2 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 12 0 1183.5833 Q9BVT8 Q9BVT8 64 75 TMUB1 Transmembrane and ubiquitin-like domain-containing protein 1 yes yes 2 0.046474 75.566 By MS/MS 8.5 0.5 1 1 2 631970 631970 0 5002 2384 5192 12090;12091 8615 8615 1 210840 0 GEATVSFDDPPSAK PMINLYTDRETGKLKGEATVSFDDPPSAKA KGEATVSFDDPPSAKAAIDWFDGKEFSGNP K G E A K A 2 0 0 2 0 0 1 1 0 0 0 1 0 1 2 2 1 0 0 1 0 0 14 0 1419.6518 P35637;Q92804 P35637 335 348 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.0014743 119.03 By MS/MS 5 0 1 1 484760 484760 0 5003 798 5193 12092 8616 8616 1 19926 0 GEAVQEELLK ELGIEICLMYIEIEKGEAVQEELLKGLDNK IEIEKGEAVQEELLKGLDNKNPKIIVACIE K G E L K G 1 0 0 0 0 1 3 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1114.587 Q14008 Q14008 122 131 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00057596 142 By MS/MS 2 0 1 1 274140 274140 0 5004 1405 5194 12093 8617 8617 1 13626 0 GEDEEENNLEVR PELEARLAHLGVQVKGEDEEENNLEVRETK QVKGEDEEENNLEVRETKIKGKSGRFFTVK K G E V R E 0 1 2 1 0 0 5 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 12 0 1431.6114 P04843 P04843 90 101 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.001492 150.46 By MS/MS 1 0 1 1 198050 198050 0 5005 458 5195 12094 8618 8618 1 9676.6 0 GEDFPANNIVK PEASPSADTTILFVKGEDFPANNIVKFLVG LFVKGEDFPANNIVKFLVGFTNKGTEDFIV K G E V K F 1 0 2 1 0 0 1 1 0 1 0 1 0 1 1 0 0 0 0 1 0 0 11 0 1202.5932 P43307 P43307 92 102 SSR1 Translocon-associated protein subunit alpha yes yes 2 0.00038541 147.4 By MS/MS 8 0 1 1 2882800 2882800 0 5006 863 5196 12095 8619 8619 1 190170 0 GEDFYCVTCHETK SNCKQVIGTGSFFPKGEDFYCVTCHETKFA PKGEDFYCVTCHETKFAKHCVKCNKAITSG K G E T K F 0 0 0 1 2 0 2 1 1 0 0 1 0 1 0 0 2 0 1 1 0 0 13 0 1644.6548 Q13642 Q13642 145 157 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.00011565 154.15 By MS/MS 8 0 1 1 836870 836870 0 5007 1394 5197 12096 8620 8620 1 55208 0 GEDIGEDLFSEALGR VVRFICRLDQTLSVRGEDIGEDLFSEALGR GEDIGEDLFSEALGRAVGQWAGAKLLDHGC R G E G R A 1 1 0 2 0 0 3 3 0 1 2 0 0 1 0 1 0 0 0 0 0 0 15 0 1606.7475 Q8N2G8 Q8N2G8 394 408 GHDC GH3 domain-containing protein yes yes 2 0.00027619 140.63 By MS/MS 6 0 1 1 3269500 3269500 0 5008 1905 5198 12097 8621 8621 0 25495 0 GEDNIDFMPTILSR LAAANSVFGRWDETKGEDNIDFMPTILSRF KGEDNIDFMPTILSRFDMIFIVKDEHNEER K G E S R F 0 1 1 2 0 0 1 1 0 2 1 0 1 1 1 1 1 0 0 0 0 0 14 0 1606.7661 P33992 P33992 500 513 MCM5 DNA replication licensing factor MCM5 yes yes 2 6.8427E-05 179.6 By MS/MS 5 0.816 1 1 1 3 909460 909460 0 5009 774 5199 12098;12099;12100 8622;8623 8623 2 24581 0 GEDVPLTEQTVSQVLQSAK LESDPQQVVHRVALRGEDVPLTEQTVSQVL PLTEQTVSQVLQSAKEQIKWSLLR______ R G E A K E 1 0 0 1 0 3 2 1 0 0 2 1 0 0 1 2 2 0 0 3 0 0 19 0 2028.0375 P61923 P61923 150 168 COPZ1 Coatomer subunit zeta-1 yes yes 2 1.0328E-19 209.56 By MS/MS 9.5 0.5 1 1 2 362470 362470 0 5010 1107 5200 12101;12102 8624 8624 1 226470 0 GEEDADGSKTQDLFR AWKPSSKRTAADKDRGEEDADGSKTQDLFR GEEDADGSKTQDLFRRVRSILNKLTPQMFQ R G E F R R 1 1 0 3 0 1 2 2 0 0 1 1 0 1 0 1 1 0 0 0 0 0 15 1 1666.7435 Q04637 Q04637 748 762 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.002666 101.45 By MS/MS 2 0 1 1 766860 766860 0 5011 1264 5201 12103 8625 8625 1 38117 0 GEEDTGQEEGGSR PVIRERLSKEKEGSRGEEDTGQEEGGSRRE SRGEEDTGQEEGGSRREPQVNQQQLQQLMD R G E S R R 0 1 0 1 0 1 4 4 0 0 0 0 0 0 0 1 1 0 0 0 0 0 13 0 1349.5331 Q7Z6Z7 Q7Z6Z7 1300 1312 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 5.1577E-12 208.33 By MS/MS 1.5 0.5 1 1 2 177400 177400 0 5012 1803 5202 12104;12105 8626 8626 1 8742.2 0 GEEILSGAQR PRNPKQSNSYDMFMRGEEILSGAQRIHDPQ DMFMRGEEILSGAQRIHDPQLLTERALHHG R G E Q R I 1 1 0 0 0 1 2 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1058.5356 P14868 P14868 422 431 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.0077948 135.43 By MS/MS 1 0 1 1 0 0 0 5013 594 5203 12106 8627 8627 1 0 0 GEELLSPLNLEQAAYAR STLREALTHRKIIAKGEELLSPLNLEQAAY ELLSPLNLEQAAYARDALAKAVYSRTFTWL K G E A R D 3 1 1 0 0 1 3 1 0 0 4 0 0 0 1 1 0 0 1 0 0 0 17 0 1872.9581 O00159 O00159 362 378 MYO1C Unconventional myosin-Ic yes yes 2 1.547E-13 217.46 By MS/MS 3.5 0.5 1 1 2 2185200 2185200 0 5014 72 5204 12107;12108 8628 8628 1 59622 0 GEENLMDAQVK TVLIKTAEELMNFSKGEENLMDAQVKAIAD NFSKGEENLMDAQVKAIADTGANVVVTGGK K G E V K A 1 0 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1232.5707 P50990 P50990 271 281 CCT8 T-complex protein 1 subunit theta yes yes 2 1.9503E-07 190.57 By MS/MS By matching 6.17 0.687 1 3 2 5 1 10940000 10924000 16451 5015 955 5205;5206 12109;12110;12111;12112;12113;12114 8629;8630 8629 704 2 105600 50454 GEETPVIVGSALCALEGR VELEIRELLTEFGYKGEETPVIVGSALCAL TPVIVGSALCALEGRDPELGLKSVQKLLDA K G E G R D 2 1 0 0 1 0 3 3 0 1 2 0 0 0 1 1 1 0 0 2 0 0 18 0 1856.9302 P49411 P49411 210 227 TUFM Elongation factor Tu, mitochondrial yes yes 2 5.4569E-07 147.73 By MS/MS 7.5 0.5 1 1 2 310990 310990 0 5016 918 5207 12115;12116 8631 8631 1 7178.5 0 GEEVGELSR LDLLEILRQEKGGSRGEEVGELSRGKLYSL EKGGSRGEEVGELSRGKLYSLGNGRWMLTL R G E S R G 0 1 0 0 0 0 3 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 974.46689 P09543 P09543 361 369 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.0059448 113.66 By MS/MS By matching 7 0 2 1 1 784060 760870 23186 5017 516 5208 12117;12118 8632 8632 1 13597 95182 GEEVTLSNPK LVSQELQRADLGLWRGEEVTLSNPKGSQEG LGLWRGEEVTLSNPKGSQEGTKYIQNLQGL R G E P K G 0 0 1 0 0 0 2 1 0 0 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1072.5401 Q14669 Q14669 1652 1661 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 0.018274 112.11 By MS/MS 2 0 1 1 72779 72779 0 5018 1437 5209 12119 8633 8633 1 3617.5 0 GEFCSQGVR FTAKEVSFSNKPYFRGEFCSQGVREGLIVG NKPYFRGEFCSQGVREGLIVGFVHSMCQTA R G E V R E 0 1 0 0 1 1 1 2 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1038.4553 Q9UID3 Q9UID3 482 490 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.022434 95.358 By MS/MS 5 0 1 1 626300 626300 0 5019 2791 5210 12120 8634 8634 1 25743 0 GEGAGPPPPLPPAQPGAEGGGDR ______________________________ PLPPAQPGAEGGGDRGLGDRPAPKDKWSNF K G E D R G 3 1 0 1 0 1 2 7 0 0 1 0 0 0 7 0 0 0 0 0 0 0 23 0 2079.9974 Q5T9A4;Q9NVI7 Q9NVI7 13 35 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 1.7981E-11 156.29 By MS/MS 5.5 0.5 1 1 2 2868700 2868700 0 5020 2655;1634 5211 12121;12122 8635 8635 1 57855 0 GEGAIGSLDYTPEER IRTALLAIIGFMPTKGEGAIGSLDYTPEER GEGAIGSLDYTPEERRALAKKSQDFCCEGC K G E E R R 1 1 0 1 0 0 3 3 0 1 1 0 0 0 1 1 1 0 1 0 0 0 15 0 1592.7318 Q9Y385 Q9Y385 123 137 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 2 2.687E-14 202.05 By MS/MS 7.5 0.5 1 1 2 1478300 1478300 0 5021 2918 5212 12123;12124 8636;8637 8637 2 53759 0 GEGGILINSQGER TGIYGAGCLITEGCRGEGGILINSQGERFM CRGEGGILINSQGERFMERYAPVAKDLASR R G E E R F 0 1 1 0 0 1 2 4 0 2 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1328.6684 P31040 P31040 313 325 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 1.6761E-17 216.91 By MS/MS 5 0 1 1 2132000 2132000 0 5022 749 5213 12125 8638 8638 1 87634 0 GEGLPNFDNNNIK SRDKITRPGAKLWKKGEGLPNFDNNNIKGS KKGEGLPNFDNNNIKGSLIITFDVDFPKEQ K G E I K G 0 0 4 1 0 0 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 0 13 0 1430.679 Q9UBS4 Q9UBS4 303 315 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.039325 75.819 By MS/MS 7 0 1 1 4529700 4529700 0 5023 2756 5214 12126 8639 8639 1 80947 0 GEGQLGPAER LKQFAEMYVAKFAAKGEGQLGPAERAKKVE KFAAKGEGQLGPAERAKKVEDMMKKLWGDR K G E E R A 1 1 0 0 0 1 2 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 10 0 1012.4938 P13639 P13639 240 249 EEF2 Elongation factor 2 yes yes 2 9.4235E-05 167.93 By MS/MS By matching 5.6 1.62 2 1 1 1 4 1 29180000 29111000 69671 5024 576 5215 12127;12128;12129;12130;12131 8640;8641;8642;8643 8641 4 808890 145580 GEGVGAYNPQLNLK RVVAAEEKNGVVFIRGEGVGAYNPQLNLKN RGEGVGAYNPQLNLKNVQRNLILLHPQLLL R G E L K N 1 0 2 0 0 1 1 3 0 0 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1458.7467 Q9UL01 Q9UL01 539 552 DSE Dermatan-sulfate epimerase yes yes 2 0.0019626 117.53 By MS/MS 6 0 1 1 497360 497360 0 5025 2818 5216 12132 8644 8644 0 3878.5 0 GEHALKDAR QCKNVQDAIADAEQRGEHALKDARNKLNDL ADAEQRGEHALKDARNKLNDLEEALQQAKE R G E A R N 2 1 0 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 995.51484 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 431 439 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.012022 120.99 By MS/MS By MS/MS 4.64 2.67 2 1 1 1 2 2 2 5 6 1467700 1004500 463190 + 5026 52 5217 12133;12134;12135;12136;12137;12138;12139;12140;12141;12142;12143 8645;8646;8647;8648;8649;8650 8647 6 201080 998400 GEHPGLSIGDVAK SAFFLFCSEYRPKIKGEHPGLSIGDVAKKL IKGEHPGLSIGDVAKKLGEMWNNTAADDKQ K G E A K K 1 0 0 1 0 0 1 3 1 1 1 1 0 0 1 1 0 0 0 1 0 0 13 0 1278.6568 P09429;B2RPK0 P09429 115 127 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 2 0.011566 83.226 By MS/MS 8.5 0.5 1 1 2 1402000 1402000 0 5027 515 5218 12144;12145 8651 8651 1 156420 0 GEHSIVYLKPSYAFGSVGK DLPYGLERAIQRMEKGEHSIVYLKPSYAFG IVYLKPSYAFGSVGKEKFQIPPNAELKYEL K G E G K E 1 0 0 0 0 0 1 3 1 1 1 2 0 1 1 3 0 0 2 2 0 0 19 1 2038.0524 Q02790 Q02790 214 232 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 3 0.0017164 91.065 By MS/MS 6 0 1 1 5685800 5685800 0 5028 1255 5219 12146 8652 8652 1 44338 0 GEIAEAYADLVK CYLEELNFRNPLGMKGEIAEAYADLVKQAW GMKGEIAEAYADLVKQAWSGHHRSIVPHVF K G E V K Q 3 0 0 1 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 12 0 1277.6503 P51784 P51784 356 367 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.0007231 136.48 By MS/MS 4 0 1 1 285850 285850 0 5029 976 5220 12147 8653 8653 1 7803.3 0 GEIGDATPFNDAVNVQK GHLIECLQGKVSANKGEIGDATPFNDAVNV IGDATPFNDAVNVQKISNLLSDYGYHLRGN K G E Q K I 2 0 2 2 0 1 1 2 0 1 0 1 0 1 1 0 1 0 0 2 0 0 17 0 1773.8533 P30876 P30876 994 1010 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 3.6976E-19 212.1 By MS/MS 3.5 0.5 1 1 2 1439600 1439600 0 5030 748 5221 12148;12149 8654 8654 1 37698 0 GEILLTELQGDSR ______________________________ ERGEILLTELQGDSRSLPFSENVSAVQKLD R G E S R S 0 1 0 1 0 1 2 2 0 1 3 0 0 0 0 1 1 0 0 0 0 0 13 0 1429.7413 Q16513 Q16513 8 20 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0020707 119.39 By MS/MS 3 0 1 1 683980 683980 0 5031 1535 5222 12150 8655 8655 1 17855 0 GELLALVK YHSCKQYGITGENVRGELLALVKDLPSQLA ITGENVRGELLALVKDLPSQLAEIGAAAQQ R G E V K D 1 0 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 8 0 841.5273 Q96JB5 Q96JB5 177 184 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.011957 117.16 By MS/MS 5 0 1 1 808570 808570 0 5032 2206 5223 12151 8656 8656 1 33236 0 GELPLDINIQEPR ______________________________ ______________________________ M G E P R W 0 1 1 1 0 1 2 1 0 2 2 0 0 0 2 0 0 0 0 0 0 0 13 0 1492.7886 Q9BWM7 Q9BWM7 2 14 SFXN3 Sideroflexin-3 yes yes 2 0.00045135 128.85 By MS/MS 8 0 1 1 371700 371700 0 5033 2397 5224 12152 8657 8657 1 24521 0 GELQNWPDLLPK IRATVGILITTIASKGELQNWPDLLPKLCS ASKGELQNWPDLLPKLCSLLDSEDYNTCEG K G E P K L 0 0 1 1 0 1 1 1 0 0 3 1 0 0 2 0 0 1 0 0 0 0 12 0 1408.7351 Q92973 Q92973 129 140 TNPO1 Transportin-1 yes yes 2 0.0030326 115.91 By MS/MS 7 2 1 1 1 1 1 1 1 7 3806500 3806500 0 5034 2093 5225 12153;12154;12155;12156;12157;12158;12159 8658 8658 1 174500 0 GELVESLKR SFVCWSRGFMEMNGRGELVESLKRFCASTR MEMNGRGELVESLKRFCASTRLPPTPLLLF R G E K R F 0 1 0 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 9 1 1029.5819 Q9Y679 Q9Y679 136 144 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.030423 109.48 By MS/MS 7.5 0.5 1 1 2 5990600 5990600 0 5035 2997 5226 12160;12161 8659 8659 1 143810 0 GELVGGLDIVK KAYSNWPTYPQLYVKGELVGGLDIVKELKE LYVKGELVGGLDIVKELKENGELLPILRGE K G E V K E 0 0 0 1 0 0 1 3 0 1 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1098.6285 O76003 O76003 309 319 GLRX3 Glutaredoxin-3 yes yes 2 0.0020123 120.27 By MS/MS 7.5 0.5 1 1 2 5840400 5840400 0 5036 342 5227 12162;12163 8660 8660 1 120250 0 GEMNVTLGIPR PSTQMTLNTFHFAGRGEMNVTLGIPRLREI FAGRGEMNVTLGIPRLREILMVASANIKTP R G E P R L 0 1 1 0 0 0 1 2 0 1 1 0 1 0 1 0 1 0 0 1 0 0 11 0 1185.6176 O95602 O95602 1237 1247 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.008625 96.015 By MS/MS 2 0 1 1 216700 216700 0 5037 401 5228 12164 8661;8662;8663 8662 211 3 10771 0 GENALKDAK QISNLQQSISDAEQRGENALKDAKNKLNDL SDAEQRGENALKDAKNKLNDLEDALQQAKE R G E A K N 2 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 944.49271 P04264;CON__P04264 P04264 433 441 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.0041958 151.83 By MS/MS By MS/MS 5.48 2.99 3 2 1 3 1 2 2 3 2 2 5 16 7443300 1975500 5467700 + 5038 450;45 5229 12165;12166;12167;12168;12169;12170;12171;12172;12173;12174;12175;12176;12177;12178;12179;12180;12181;12182;12183;12184;12185 8664;8665;8666;8667;8668;8669;8670;8671 8670 8 1057700 12616000 GENCIAAGR DKAVRMGMGAVFFNKGENCIAAGRLFVEES AVFFNKGENCIAAGRLFVEESIHDEFVTRV K G E G R L 2 1 1 0 1 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 9 0 946.42906 Q3SY69;O75891 Q3SY69 725 733 ALDH1L2;ALDH1L1 Mitochondrial 10-formyltetrahydrofolate dehydrogenase;Cytosolic 10-formyltetrahydrofolate dehydrogenase no no 2 0.0010286 141.48 By MS/MS 4.5 0.5 1 1 2 1540800 1540800 0 5039 1570;336 5230 12186;12187 8672 8672 1 43088 0 GENGRQGIPGQQGIQGHHGAK GDKGNQGEKGIQGQKGENGRQGIPGQQGIQ GIPGQQGIQGHHGAKGERGEKGEPGVRGAI K G E A K G 1 1 1 0 0 4 1 7 2 2 0 1 0 0 1 0 0 0 0 0 0 0 21 1 2125.0525 Q96P44 Q96P44 713 733 COL21A1 Collagen alpha-1(XXI) chain yes yes 4 0.012349 60.764 By MS/MS 7 0 1 1 6837900 6837900 0 5040 2236 5231 12188 8673 8673 1 122190 0 GENSWFSTQVDTVATK KKSIRVILDLTPNYRGENSWFSTQVDTVAT ENSWFSTQVDTVATKVKDALEFWLQAGVDG R G E T K V 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 2 3 1 0 2 0 0 16 0 1768.8268 P08195 P08195 314 329 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 1.3078E-38 315.29 By MS/MS 4.5 0.5 1 1 2 1498700 1498700 0 5041 499 5232 12189;12190 8674;8675 8675 2 53252 0 GENVTVENQPR VKRSTTQVADSGYQRGENVTVENQPRLLLE GYQRGENVTVENQPRLLLELLELLFDKFNA R G E P R L 0 1 2 0 0 1 2 1 0 0 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1241.6 Q96A65 Q96A65 326 336 EXOC4 Exocyst complex component 4 yes yes 2 0.0051683 107.03 By MS/MS 4 0 1 1 604560 604560 0 5042 2118 5233 12191 8676 8676 1 16504 0 GEPEKLGQALTEVYAK EIPPSDSISETVILRGEPEKLGQALTEVYA EPEKLGQALTEVYAKANSFTVSSVAAPSWL R G E A K A 2 0 0 0 0 1 3 2 0 0 2 2 0 0 1 0 1 0 1 1 0 0 16 1 1731.9043 Q00341 Q00341 345 360 HDLBP Vigilin yes yes 2 4.8281E-05 145.43 By MS/MS 3 0 1 1 2145000 2145000 0 5043 1231 5234 12192 8677 8677 1 55995 0 GEPPLPEEDLSK YQQRRQQENMQRQSRGEPPLPEEDLSKLFK QSRGEPPLPEEDLSKLFKPPQPPARMDSLL R G E S K L 0 0 0 1 0 0 3 1 0 0 2 1 0 0 3 1 0 0 0 0 0 0 12 0 1309.6402 O15372 O15372 292 303 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.040487 77.379 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 37480000 37276000 204610 5044 173 5235 12193;12194;12195;12196;12197 8678 8678 1 1127800 839970 GEPVLLVGETGTGK PSSVLIEQLAVCVSKGEPVLLVGETGTGKT KGEPVLLVGETGTGKTSTIQYLAHITGHRL K G E G K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 0 2 0 0 2 0 0 14 0 1355.7296 Q9NU22 Q9NU22 670 683 MDN1 Midasin yes yes 2 6.497E-12 196.67 By MS/MS 2 0.816 1 1 1 3 1550600 1550600 0 5045 2635 5236 12198;12199;12200 8679;8680 8679 2 65860 0 GEQHGSSSGSSSSYGQHGSGSR SSYEQHGSRSGQSSRGEQHGSSSGSSSSYG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS R G E S R Q 0 1 0 0 0 2 1 6 2 0 0 0 0 0 0 9 0 0 1 0 0 0 22 0 2121.8696 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1910 1931 HRNR Hornerin yes no 3 0.005154 66.467 By matching By MS/MS 2.67 0.471 1 2 1 2 223620 56358 167260 + 5046 64 5237 12201;12202;12203 8681;8682 8682 2 1471.2 161340 GESFYQDR LNKIYDALDVSLIERGESFYQDRMNDIVKE DVSLIERGESFYQDRMNDIVKEFEDRGFVQ R G E D R M 0 1 0 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 8 0 1000.425 P54136 P54136 334 341 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0052244 136.27 By MS/MS 6 0.816 1 1 1 3 2692000 2692000 0 5047 1013 5238 12204;12205;12206 8683 8683 1 92691 0 GESPVDYDGGR RYGIRGFPTIKIFQKGESPVDYDGGRTRSD IFQKGESPVDYDGGRTRSDIVSRALDLFSD K G E G R T 0 1 0 2 0 0 1 3 0 0 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1150.4891 Q15084 Q15084 246 256 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.0022622 119.22 By MS/MS By matching 6.75 0.829 2 1 1 3 1 5151000 5113400 37644 5048 1478 5239 12207;12208;12209;12210 8684 8684 1 45665 115450 GESQTDIEITR NPRIVLLDSSLEYKKGESQTDIEITREEDF EYKKGESQTDIEITREEDFTRILQMEEEYI K G E T R E 0 1 0 1 0 1 2 1 0 2 0 0 0 0 0 1 2 0 0 0 0 0 11 0 1247.5994 P49368 P49368 250 260 CCT3 T-complex protein 1 subunit gamma yes yes 2 2.0532E-06 175.33 By MS/MS 6 0 1 1 0 0 0 5049 916 5240 12211 8685 8685 1 0 0 GESQTDIEITREEDFTR NPRIVLLDSSLEYKKGESQTDIEITREEDF SQTDIEITREEDFTRILQMEEEYIQQLCED K G E T R I 0 2 0 2 0 1 4 1 0 2 0 0 0 1 0 1 3 0 0 0 0 0 17 1 2024.9287 P49368 P49368 250 266 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.0013591 132.14 By MS/MS 6 0.816 2 2 2 6 32559000 32559000 0 5050 916 5241 12212;12213;12214;12215;12216;12217 8686;8687 8687 2 345160 0 GETAVPGAPEALR DVDTLLFDCDGVLWRGETAVPGAPEALRAL WRGETAVPGAPEALRALRARGKRLGFITNN R G E L R A 3 1 0 0 0 0 2 2 0 0 1 0 0 0 2 0 1 0 0 1 0 0 13 0 1266.6568 A6NDG6 A6NDG6 42 54 PGP Phosphoglycolate phosphatase yes yes 2 0.00527 101.95 By MS/MS 8 0 1 1 1709300 1709300 0 5051 20 5242 12218 8688 8688 1 112760 0 GETDLIQK VLPRIHDVLCKLVEKGETDLIQKAMDFVSQ LCKLVEKGETDLIQKAMDFVSQEQGEMVML K G E Q K A 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 902.47091 P42704 P42704 869 876 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.013245 108.46 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 20087000 20087000 0 5052 854 5243 12219;12220;12221;12222;12223;12224;12225;12226;12227 8689 8689 1 392770 0 GETLGIIGLGR VEQIREVASGAARIRGETLGIIGLGRVGQA ARIRGETLGIIGLGRVGQAVALRAKAFGFN R G E G R V 0 1 0 0 0 0 1 4 0 2 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1084.6241 Q13363 Q13363 174 184 CTBP1 C-terminal-binding protein 1 yes yes 2 1.4164E-07 193.1 By MS/MS 7 0 1 1 493530 493530 0 5053 1360 5244 12228 8690 8690 1 8819.6 0 GETLGLIGFGR VEQIREVASGAARIRGETLGLIGFGRTGQA ARIRGETLGLIGFGRTGQAVAVRAKAFGFS R G E G R T 0 1 0 0 0 0 1 4 0 1 2 0 0 1 0 0 1 0 0 0 0 0 11 0 1118.6084 P56545 P56545 180 190 CTBP2 C-terminal-binding protein 2 yes yes 2 0.00098183 158.76 By MS/MS 7 0 1 1 569350 569350 0 5054 1047 5245 12229 8691 8691 1 10174 0 GETLNHHVNAR CRDMEKCEAAAKDIRGETLNHHVNARHLDL KDIRGETLNHHVNARHLDLASLKSIREFAA R G E A R H 1 1 2 0 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1246.6167 Q8NBN7 Q8NBN7 84 94 RDH13 Retinol dehydrogenase 13 yes yes 3 0.01308 89.171 By MS/MS 8 0 1 1 667620 667620 0 5055 1943 5246 12230 8692 8692 1 44043 0 GETVPLDVLQIK NKVQHITDATLAIVKGETVPLDVLQIKGEK IVKGETVPLDVLQIKGEKEQPVFAMTGLRW K G E I K G 0 0 0 1 0 1 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 12 0 1310.7446 Q53H12 Q53H12 185 196 AGK Acylglycerol kinase, mitochondrial yes yes 2 3.4574E-05 169.37 By MS/MS 7 0.816 1 1 1 3 24217000 24217000 0 5056 1587 5247 12231;12232;12233 8693;8694 8694 1 468490 0 GETVPLDVLQIKGEK NKVQHITDATLAIVKGETVPLDVLQIKGEK GETVPLDVLQIKGEKEQPVFAMTGLRWGSF K G E E K E 0 0 0 1 0 1 2 2 0 1 2 2 0 0 1 0 1 0 0 2 0 0 15 1 1624.9036 Q53H12 Q53H12 185 199 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.00073525 142.12 By MS/MS 7 0 1 1 1523600 1523600 0 5057 1587 5248 12234 8695 8695 1 27228 0 GEVLEGSNAYYCEK TSCQSLEISLDQFVRGEVLEGSNAYYCEKC RGEVLEGSNAYYCEKCKEKRITVKRTCIKS R G E E K C 1 0 1 0 1 0 3 2 0 0 1 1 0 0 0 1 0 0 2 1 0 0 14 0 1617.6981 Q9UPU5 Q9UPU5 1848 1861 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 9.5082E-08 176.87 By MS/MS 2 0 1 1 199920 199920 0 5058 2854 5249 12235 8696 8696 1 9937 0 GEVPCTVTSASPLEEATLSELK QGVVSAFSTMMSVHRGEVPCTVTSASPLEE TSASPLEEATLSELKTVLKSFLSQGQVLKL R G E L K T 2 0 0 0 1 0 4 1 0 0 3 1 0 0 2 3 3 0 0 2 0 0 22 0 2317.1359 P48047 P48047 137 158 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 1.0147E-06 162.37 By MS/MS By matching 9 0 3 2 1 2668200 2592200 76026 5059 900 5250 12236;12237;12238 8697;8698 8697 2 1487700 819350 GEVQALFLR VTMRTITYSINFFSKGEVQALFLRHEGYLG INFFSKGEVQALFLRHEGYLGAIGAFLKGA K G E L R H 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1031.5764 Q9NVE7 Q9NVE7 346 354 PANK4 Pantothenate kinase 4 yes yes 2 0.0096734 105.52 By MS/MS 5 0 1 1 341900 341900 0 5060 2650 5251 12239 8699 8699 1 14054 0 GEVTFEDVK ALFMVAFQLFDKAGKGEVTFEDVKQVFGQT FDKAGKGEVTFEDVKQVFGQTTIHQHIPFN K G E V K Q 0 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 9 0 1022.492 Q9UJS0 Q9UJS0 105 113 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.0010413 141.2 By MS/MS 3 2 1 1 2 6621000 6621000 0 5061 2798 5252 12240;12241 8700;8701 8701 2 272910 0 GEVVEGDPDKVLR ITFQAQLVMVVRNPKGEVVEGDPDKVLRML PKGEVVEGDPDKVLRMLYVWALCRDQDELN K G E L R M 0 1 0 2 0 0 2 2 0 0 1 1 0 0 1 0 0 0 0 3 0 0 13 1 1411.7307 O43615 O43615 406 418 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 0.0013647 150.04 By MS/MS 7.2 1.47 2 2 1 5 34146000 34146000 0 5062 209 5253 12242;12243;12244;12245;12246 8702;8703;8704;8705 8703 4 855700 0 GEYQGVFHCAVETAK CQPLDVLKTRLMNSKGEYQGVFHCAVETAK GEYQGVFHCAVETAKLGPLAFYKGLVPAGI K G E A K L 2 0 0 0 1 1 2 2 1 0 0 1 0 1 0 0 1 0 1 2 0 0 15 0 1694.7723 Q9UBX3 Q9UBX3 232 246 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 7.2757E-10 184.11 By MS/MS 6 3.56 1 1 1 3 3979400 3979400 0 5063 2761 5254 12247;12248;12249 8706;8707 8707 2 312180 0 GFAELEQQLR G F L R 1 1 0 0 0 2 2 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 10 0 1189.6091 REV__Q9H3S7 yes yes 2 0.00052763 143.89 By MS/MS By MS/MS 5.8 3.31 1 2 3 1 1 1 3 3 8 7 7083100 4868100 2215000 + 5064 3042 5255 12250;12251;12252;12253;12254;12255;12256;12257;12258;12259;12260;12261;12262;12263;12264 8708;8709;8710;8711;8712;8713 8709 6 1542100 37513000 GFAFVQYVNER IFSKYGKIVGCSVHKGFAFVQYVNERNARA SVHKGFAFVQYVNERNARAAVAGEDGRMIA K G F E R N 1 1 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 2 0 0 11 0 1328.6513 P07910 P07910 51 61 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 5.1196E-05 204.79 By MS/MS 7 0 1 1 2063700 2063700 0 5065 495 5256 12265 8714 8714 1 36879 0 GFAFVTFESPADAK VEVLLIKDRETNKSRGFAFVTFESPADAKD RGFAFVTFESPADAKDAARDMNGKSLDGKA R G F A K D 3 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 1 0 0 1 0 0 14 0 1485.714 Q96E39;P38159;O75526;Q8N7X1 Q96E39 50 63 RBMXL1;RBMX;RBMXL2;RBMXL3 RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 yes no 2 3.7239E-05 183.03 By MS/MS 7 0 1 1 362190 362190 0 5066 817 5257 12266 8715 8715 1 6472.3 0 GFDILGIKPVQR WRMLLCEAVAAVMAKGFDILGIKPVQRM__ MAKGFDILGIKPVQRM______________ K G F Q R M 0 1 0 1 0 1 0 2 0 2 1 1 0 1 1 0 0 0 0 1 0 0 12 1 1341.7769 P54136 P54136 648 659 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.019301 72.652 By MS/MS 5 0 1 1 563960 563960 0 5067 1013 5258 12267 8716 8716 1 23181 0 GFEAAVAAGAK KFPGINYPVLTPNLKGFEAAVAAGAKEVVI PNLKGFEAAVAAGAKEVVIFGAASELFTKK K G F A K E 5 0 0 0 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 1 0 0 11 0 990.51345 P35914 P35914 112 122 HMGCL Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 2 0.0013188 129.38 By MS/MS 8 0 1 1 1246300 1246300 0 5068 800 5259 12268 8717 8717 1 82216 0 GFEDEVKK QVFNKLIRRYKYLEKGFEDEVKKLLLFLKG RYKYLEKGFEDEVKKLLLFLKGFSESERNK K G F K K L 0 0 0 1 0 0 2 1 0 0 0 2 0 1 0 0 0 0 0 1 0 0 8 1 950.47091 Q7L1Q6 Q7L1Q6 127 134 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.022078 135.77 By MS/MS 7 0 1 1 1597300 1597300 0 5069 1762 5260 12269 8718 8718 1 28544 0 GFEEVIK AYTGNNSSQIQAAMKGFEEVIKKFPRCAEG SQIQAAMKGFEEVIKKFPRCAEGYALYAQA K G F I K K 0 0 0 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 7 0 820.43307 O94826 O94826 464 470 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.01699 134.66 By MS/MS 5 0 1 1 2030500 2030500 0 5070 353 5261 12270 8719 8719 1 83461 0 GFEGSFEELCR VVPDVETLCSWAQKRGFEGSFEELCRNKDV AQKRGFEGSFEELCRNKDVKKAILEDMVRL R G F C R N 0 1 0 0 1 0 3 2 0 0 1 0 0 2 0 1 0 0 0 0 0 0 11 0 1329.566 P33121 P33121 616 626 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 4.3371E-11 209.6 By MS/MS 5 0 1 1 1513200 1513200 0 5071 766 5262 12271 8720 8720 1 62201 0 GFELTFK VRETHSLFFRSLKDRGFELTFKTADDPSLS FFRSLKDRGFELTFKTADDPSLSLIKYGEF R G F F K T 0 0 0 0 0 0 1 1 0 0 1 1 0 2 0 0 1 0 0 0 0 0 7 0 840.43815 P39656 P39656 71 77 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.015469 138.85 By MS/MS 7 0.816 1 1 1 3 7684200 7684200 0 5072 825 5263 12272;12273;12274 8721 8721 1 73009 0 GFFEGTIASK IMPLDTNWPLLTVSKGFFEGTIASKGKGGA LTVSKGFFEGTIASKGKGGALAADIDIDTV K G F S K G 1 0 0 0 0 0 1 2 0 1 0 1 0 2 0 1 1 0 0 0 0 0 10 0 1055.5288 P53621 P53621 816 825 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 7.8933E-07 185.58 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 9174300 9174300 0 5073 1005 5264 12275;12276;12277;12278;12279;12280 8722;8723;8724;8725;8726 8722 5 297410 0 GFFGFPGPR ______________________________ LFDLFRGFFGFPGPRSHRDPFFGGMTRDED R G F P R S 0 1 0 0 0 0 0 3 0 0 0 0 0 3 2 0 0 0 0 0 0 0 9 0 980.48684 O00165 O00165 9 17 HAX1 HCLS1-associated protein X-1 yes yes 2 0.0084283 108.24 By MS/MS 8 0 1 1 669320 669320 0 5074 73 5265 12281 8727 8727 1 44155 0 GFFICDQPYEPVSPYSCK LKDLKKGDIIQLQRRGFFICDQPYEPVSPY ICDQPYEPVSPYSCKEAPCVLIYIPDGHTK R G F C K E 0 0 0 1 2 1 1 1 0 1 0 1 0 2 3 2 0 0 2 1 0 0 18 0 2192.9547 P07814 P07814 676 693 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.6465E-19 212.55 By MS/MS 3.5 0.5 1 1 2 1659500 1659500 0 5075 493 5266 12282;12283 8728 8728 1 43583 0 GFFIKPTVFGGVQDDMR EGAKLLCGGERFGERGFFIKPTVFGGVQDD FIKPTVFGGVQDDMRIAKEEIFGPVQPLFK R G F M R I 0 1 0 2 0 1 0 3 0 1 0 1 1 3 1 0 1 0 0 2 0 0 17 1 1912.9506 P30837 P30837 395 411 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 3 0.0049054 89.982 By MS/MS 6 0 1 1 984200 984200 0 5076 747 5267 12284 8729 8729 1 7674.8 0 GFGDVGEAK GNTFSHHSMVSMLGKGFGDVGEAKGGSTTG VSMLGKGFGDVGEAKGGSTTGSQFLEQFKT K G F A K G 1 0 0 1 0 0 1 3 0 0 0 1 0 1 0 0 0 0 0 1 0 0 9 0 878.4134 Q14157 Q14157 345 353 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 0.007566 110.12 By MS/MS 2.5 0.5 1 1 2 1137700 1137700 0 5077 1411 5268 12285;12286 8730 8730 1 30326 0 GFGFGLVK SYADLGKAARDIFNKGFGFGLVKLDVKTKS ARDIFNKGFGFGLVKLDVKTKSCSGVEFST K G F V K L 0 0 0 0 0 0 0 3 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 823.45922 P45880 P45880 32 39 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 0.050634 91.093 By MS/MS 8 0 1 1 1187100 1187100 0 5078 870 5269 12287 8731 8731 1 78315 0 GFGFVCFSSPEEATK TITSAKVMMEGGRSKGFGFVCFSSPEEATK GFGFVCFSSPEEATKAVTEMNGRIVATKPL K G F T K A 1 0 0 0 1 0 2 2 0 0 0 1 0 3 1 2 1 0 0 1 0 0 15 0 1661.7396 P11940;Q9H361;Q4VXU2;Q13310 P11940 334 348 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 no no 2 6.2713E-06 185.3 By MS/MS 6 0.816 1 1 1 3 5592800 5592800 0 5079 560;1353 5270 12288;12289;12290 8732 8732 1 197230 0 GFGFVDFNSEEDAK VRARIVTDRETGSSKGFGFVDFNSEEDAKA KGFGFVDFNSEEDAKAAKEAMEDGEIDGNK K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338 P19338 611 624 NCL Nucleolin yes yes 2 3.7754E-13 213.38 By MS/MS 4.5 0.5 1 1 2 814790 814790 0 5080 629 5271 12291;12292 8733 8733 1 23484 0 GFGFVSFER ALSVKVMTDESGKSKGFGFVSFERHEDAQK ESGKSKGFGFVSFERHEDAQKAVDEMNGKE K G F E R H 0 1 0 0 0 0 1 2 0 0 0 0 0 3 0 1 0 0 0 1 0 0 9 0 1044.5029 P11940;Q9H361 P11940 232 240 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.0021045 128.69 By MS/MS 5.5 0.5 1 1 2 1657300 1657300 0 5081 560 5272 12293;12294 8734 8734 1 59934 0 GFGFVSFERHEDAQK ALSVKVMTDESGKSKGFGFVSFERHEDAQK GFGFVSFERHEDAQKAVDEMNGKELNGKQI K G F Q K A 1 1 0 1 0 1 2 2 1 0 0 1 0 3 0 1 0 0 0 1 0 0 15 1 1752.822 P11940;Q9H361 P11940 232 246 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 3 0.029017 62.891 By MS/MS 5 0 1 1 1162600 1162600 0 5082 560 5273 12295 8735 8735 1 47789 0 GFGFVTFADPASVDK RECMVMRDPTTKRSRGFGFVTFADPASVDK GFGFVTFADPASVDKVLGQPHHELDSKTID R G F D K V 2 0 0 2 0 0 0 2 0 0 0 1 0 3 1 1 1 0 0 2 0 0 15 0 1556.7511 Q96DH6 Q96DH6 63 77 MSI2 RNA-binding protein Musashi homolog 2 yes yes 2 1.008E-05 148.18 By MS/MS 7.5 0.5 1 1 2 341520 341520 0 5083 2151 5274 12296;12297 8736;8737 8737 2 17141 0 GFGFVTFENSADADR KILDVEIIFNERGSKGFGFVTFENSADADR GFGFVTFENSADADRAREKLHGTVVEGRKI K G F D R A 2 1 1 2 0 0 1 2 0 0 0 0 0 3 0 1 1 0 0 1 0 0 15 0 1631.7216 O43251;Q9NWB1 O43251 161 175 RBFOX2;RBFOX1 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1 yes no 2 1.3873E-28 297.18 By MS/MS 6 0 1 1 2791300 2791300 0 5084 188 5275 12298 8738 8738 1 21766 0 GFGIFVEGVEPGSK RESPLQFSLNGGSEKGFGIFVEGVEPGSKA KGFGIFVEGVEPGSKAADSGLKRGDQIMEV K G F S K A 0 0 0 0 0 0 2 4 0 1 0 1 0 2 1 1 0 0 0 2 0 0 14 0 1421.7191 Q8TEU7 Q8TEU7 553 566 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 2 2.0833E-05 126.71 By MS/MS 2.5 0.5 1 1 2 122790 122790 0 5085 2004 5276 12299;12300 8739;8740 8739 2 3205.5 0 GFGSDQSENVDR RTWLGVWGVRTMQARGFGSDQSENVDRGAG QARGFGSDQSENVDRGAGSIREAGGAFGKR R G F D R G 0 1 1 2 0 1 1 2 0 0 0 0 0 1 0 2 0 0 0 1 0 0 12 0 1309.5535 Q9UII2 Q9UII2 24 35 ATPIF1 ATPase inhibitor, mitochondrial yes yes 2 0.0024577 118.77 By MS/MS 10 0 1 1 141880 141880 0 5086 2792 5277 12301 8741 8741 1 150800 0 GFGYGQGAGALVHAQ EIYCKGCYAKNFGPKGFGYGQGAGALVHAQ GFGYGQGAGALVHAQ_______________ K G F A Q - 3 0 0 0 0 2 0 5 1 0 1 0 0 1 0 0 0 0 1 1 0 0 15 0 1431.6895 Q16527 Q16527 179 193 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 4.8144E-10 187.99 By MS/MS 9 0 1 1 2375900 2375900 0 5087 1536 5278 12302 8742 8742 1 1363600 0 GFHQEVFLGK HLNGVKLEMDGHLNRGFHQEVFLGKDLGGF GHLNRGFHQEVFLGKDLGGFDEDAEPRRSR R G F G K D 0 0 0 0 0 1 1 2 1 0 1 1 0 2 0 0 0 0 0 1 0 0 10 0 1160.5978 Q9BRK5 Q9BRK5 76 85 SDF4 45 kDa calcium-binding protein yes yes 2;3 0.00028855 153.24 By MS/MS 6.67 0.471 1 2 3 7365600 7365600 0 5088 2324 5279 12303;12304;12305 8743;8744 8743 2 98138 0 GFIAGIDLK NPLYKERHQVQLLGRGFIAGIDLKQQKREQ VQLLGRGFIAGIDLKQQKREQSRFYGDLME R G F L K Q 1 0 0 1 0 0 0 2 0 2 1 1 0 1 0 0 0 0 0 0 0 0 9 0 932.53312 Q9BUQ8 Q9BUQ8 302 310 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 0.0059448 119.41 By MS/MS 4 0 1 1 213660 213660 0 5089 2366 5280 12306 8745 8745 1 5832.7 0 GFIDALTR TLDEFGTARRSTVVRGFIDALTRGGPGGTP RRSTVVRGFIDALTRGGPGGTPRPIEMHSH R G F T R G 1 1 0 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 8 0 891.48142 Q9Y2V7 Q9Y2V7 280 287 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.038372 95.909 By MS/MS 5 0 1 1 938580 938580 0 5090 2903 5281 12307 8746 8746 1 38579 0 GFKDQIYDIFQK IKMFVLDEADEMLSRGFKDQIYDIFQKLNS LSRGFKDQIYDIFQKLNSNTQVVLLSATMP R G F Q K L 0 0 0 2 0 2 0 1 0 2 0 2 0 2 0 0 0 0 1 0 0 0 12 1 1500.7613 P60842 P60842 191 202 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 1.2462E-68 318.59 By MS/MS 5.25 1.98 2 1 1 2 6 3 1 16 959470000 959470000 0 5091 1074 5282 12308;12309;12310;12311;12312;12313;12314;12315;12316;12317;12318;12319;12320;12321;12322;12323 8747;8748;8749;8750;8751;8752;8753;8754;8755;8756;8757 8751 11 7552600 0 GFLNSSELSGLPAGPDR MHCQTLKDQPSAYSKGFLNSSELSGLPAGP LNSSELSGLPAGPDREGSLKDQLALAIGKL K G F D R E 1 1 1 1 0 0 1 3 0 0 3 0 0 1 2 3 0 0 0 0 0 0 17 0 1715.8479 P43897 P43897 162 178 TSFM Elongation factor Ts, mitochondrial yes yes 2 8.5202E-05 168 By MS/MS 8 0.816 1 1 1 3 12745000 12745000 0 5092 868 5283 12324;12325;12326 8758 8758 1 898810 0 GFMINGNR REAAQAMYIDSYNSRGFMINGNRVLGPCAL IDSYNSRGFMINGNRVLGPCALLPHSVVQW R G F N R V 0 1 2 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 0 0 8 0 907.43342 Q9BU61 Q9BU61 67 74 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 0.017017 101.21 By MS/MS 10 0 1 1 83688 83688 0 5093 2360 5284 12327 8759 8759 1471 1 88952 0 GFNAVMIR LRELIRDEGVTSLYKGFNAVMIRAFPANAA GVTSLYKGFNAVMIRAFPANAACFLGFEVA K G F I R A 1 1 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 8 0 906.47456 O43772 O43772 268 275 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0049327 128.86 By MS/MS 8 0 1 1 1168500 1168500 0 5094 222 5285 12328 8760 8760 131 1 77088 0 GFNLNPLNQDELK KVNRLFEAQGKPELKGFNLNPLNQDELKAL LKGFNLNPLNQDELKALKVILKG_______ K G F L K A 0 0 3 1 0 1 1 1 0 0 3 1 0 1 1 0 0 0 0 0 0 0 13 0 1500.7573 Q9NUG6 Q9NUG6 113 125 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 2 0.0013821 126.66 By MS/MS 10 0 1 1 255870 255870 0 5095 2636 5286 12329 8761 8761 1 271960 0 GFPTIYFSPANK MDATANDVPSPYEVRGFPTIYFSPANKKLN EVRGFPTIYFSPANKKLNPKKYEGGRELSD R G F N K K 1 0 1 0 0 0 0 1 0 1 0 1 0 2 2 1 1 0 1 0 0 0 12 0 1340.6765 P30101 P30101 449 460 PDIA3 Protein disulfide-isomerase A3 yes yes 2 4.9701E-05 166.07 By MS/MS 6 0 1 1 2454400 2454400 0 5096 736 5287 12330 8762 8762 1 19140 0 GFQEDSEIR AFPVGNAFSYYQSNRGFQEDSEIRAAEKKF YYQSNRGFQEDSEIRAAEKKFGSNKAEMVV R G F I R A 0 1 0 1 0 1 2 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1079.4884 Q9HD20 Q9HD20 208 216 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.00095945 143.03 By MS/MS By matching 1.33 0.471 2 1 2 1 993360 976170 17191 5097 2566 5288 12331;12332;12333 8763;8764 8764 2 47987 17191 GFQEVVTPNIFNSR YNALIEFIRSEYRKRGFQEVVTPNIFNSRL RGFQEVVTPNIFNSRLWMTSGHWQHYSENM R G F S R L 0 1 2 0 0 1 1 1 0 1 0 0 0 2 1 1 1 0 0 2 0 0 14 0 1606.8104 P26639 P26639 368 381 TARS Threonine--tRNA ligase, cytoplasmic yes yes 2 0.0023021 120.57 By MS/MS 5 0 1 1 287710 287710 0 5098 698 5289 12334 8765 8765 0 11826 0 GFSAEQIAR KGKPKRGDTYELQVRGFSAEQIARWIADRT YELQVRGFSAEQIARWIADRTDVNIRVIRP R G F A R W 2 1 0 0 0 1 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 9 0 977.49304 Q9H0U3 Q9H0U3 160 168 MAGT1 Magnesium transporter protein 1 yes yes 2 0.026802 97.635 By MS/MS 8 0 1 1 0 0 0 5099 2458 5290 12335 8766 8766 1 0 0 GFSLEELR RCPTVRYHTKVRAGRGFSLEELRVAGIHKK TKVRAGRGFSLEELRVAGIHKKVARTIGIS R G F L R V 0 1 0 0 0 0 2 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 949.4869 P26373 P26373 75 82 RPL13 60S ribosomal protein L13 yes yes 2 0.0026636 152.47 By MS/MS 8 0 1 1 1771600 1771600 0 5100 695 5291 12336 8767 8767 1 116870 0 GFSLLATEDK EELGFRPEYSASQLKGFSLLATEDKEALKK ASQLKGFSLLATEDKEALKKQLPGVKSEGK K G F D K E 1 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1079.5499 P09874 P09874 183 192 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.0115E-06 182.76 By MS/MS 3.5 0.5 1 1 2 2198800 2198800 0 5101 521 5292 12337;12338 8768 8768 1 59850 0 GFSLLATEDKEALKK EELGFRPEYSASQLKGFSLLATEDKEALKK GFSLLATEDKEALKKQLPGVKSEGKRKGDE K G F K K Q 2 0 0 1 0 0 2 1 0 0 3 3 0 1 0 1 1 0 0 0 0 0 15 2 1648.9036 P09874 P09874 183 197 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 1.0168E-14 213.84 By MS/MS 3.67 0.471 1 2 3 17268000 17268000 0 5102 521 5293 12339;12340;12341 8769;8770 8770 2 470770 0 GFSSGSAVVSGGSR SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG R G F S R R 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 0 14 0 1253.6 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 21 34 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 2 7.6109E-18 216.03 By MS/MS By MS/MS 5.65 2.82 2 2 1 2 2 3 2 2 2 2 8 12 50572000 27924000 22649000 + 5103 52 5294 12342;12343;12344;12345;12346;12347;12348;12349;12350;12351;12352;12353;12354;12355;12356;12357;12358;12359;12360;12361 8771;8772;8773;8774;8775;8776;8777;8778;8779;8780;8781;8782;8783;8784;8785;8786;8787;8788;8789;8790;8791;8792;8793;8794;8795;8796 8795 26 8521600 103950000 GFSVVADTPELQR SQVRYKEEFEKNKGKGFSVVADTPELQRIK GKGFSVVADTPELQRIKKTQDQISNIKYHE K G F Q R I 1 1 0 1 0 1 1 1 0 0 1 0 0 1 1 1 1 0 0 2 0 0 13 0 1417.7201 Q14847 Q14847 97 109 LASP1 LIM and SH3 domain protein 1 yes yes 2 0.0040512 129.16 By MS/MS 8 0 1 1 771870 771870 0 5104 1450 5295 12362 8797 8797 1 50920 0 GFSYLLAGR TRHPAATAQLETAVRGFSYLLAGRFADSHE LETAVRGFSYLLAGRFADSHELSELVYSAS R G F G R F 1 1 0 0 0 0 0 2 0 0 2 0 0 1 0 1 0 0 1 0 0 0 9 0 982.52362 Q9Y5Y5 Q9Y5Y5 31 39 PEX16 Peroxisomal membrane protein PEX16 yes yes 2 0.0014471 135.77 By MS/MS 7 0 1 1 880750 880750 0 5105 2988 5296 12363 8798 8798 1 15739 0 GFTAAGILSAHK VGFIGAGQLAYALARGFTAAGILSAHKIIA LARGFTAAGILSAHKIIASSPEMNLPTVSA R G F H K I 3 0 0 0 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 0 0 0 12 0 1171.635 Q96C36 Q96C36 18 29 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 5.6194E-13 204.34 By MS/MS 8 0 1 1 0 0 0 5106 2136 5297 12364 8799 8799 1 0 0 GFTAAGVLAAHK VGFIGAGQLAFALAKGFTAAGVLAAHKIMA LAKGFTAAGVLAAHKIMASSPDMDLATVSA K G F H K I 4 0 0 0 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 1 0 0 12 0 1141.6244 P32322 P32322 18 29 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 3.5347E-05 199.89 By MS/MS 8.5 0.5 1 1 2 9039300 9039300 0 5107 764 5298 12365;12366 8800 8800 1 659660 0 GFTLNDAANSR TQAMEVKAFAETHIKGFTLNDAANSRLIIT THIKGFTLNDAANSRLIITQVRRDYLKEAV K G F S R L 2 1 2 1 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 0 1164.5523 P42704 P42704 1099 1109 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.3041E-29 260.98 By MS/MS 3.88 1.9 1 1 2 1 1 1 1 8 37961000 37961000 0 5108 854 5299 12367;12368;12369;12370;12371;12372;12373;12374 8801;8802;8803;8804;8805;8806 8802 5 959160 0 GFVEIQTPK QSGICHLFRETLINKGFVEIQTPKIISAAS ETLINKGFVEIQTPKIISAASEGGANVFTV K G F P K I 0 0 0 0 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 9 0 1017.5495 P14868 P14868 214 222 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.0348 88.37 By matching By MS/MS 6 0 2 1 1 3125200 3077500 47634 5109 594 5300 12375;12376 8807 8807 1 23999 146090 GFVLQDTVEQLR QTKITQDIFQQLLKRGFVLQDTVEQLRCEH LKRGFVLQDTVEQLRCEHCARFLADRFVEG R G F L R C 0 1 0 1 0 2 1 1 0 0 2 0 0 1 0 0 1 0 0 2 0 0 12 0 1403.7409 P56192 P56192 377 388 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 4.1325E-07 183.33 By MS/MS 3.5 0.5 1 1 2 7242300 7242300 0 5110 1042 5301 12377;12378 8808 8808 1 197530 0 GFVVINQK KIIELKRKVCGDSDKGFVVINQKGIDPFSL VCGDSDKGFVVINQKGIDPFSLDALSKEGI K G F Q K G 0 0 1 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 2 0 0 8 0 903.5178 P40227;Q92526 P40227 288 295 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 0.0032535 148.07 By MS/MS 4.75 2.28 1 1 1 1 4 19328000 19328000 0 5111 828 5302 12379;12380;12381;12382 8809;8810;8811 8810 3 185990 0 GFYIYQEGVK TQMVSKGFLGRKSGKGFYIYQEGVKRKDLN RKSGKGFYIYQEGVKRKDLNSDMDSILASL K G F V K R 0 0 0 0 0 1 1 2 0 1 0 1 0 1 0 0 0 0 2 1 0 0 10 0 1202.5972 P40939 P40939 635 644 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00045357 146.79 By MS/MS By MS/MS 6.33 1.89 2 1 2 1 13870000 13824000 45745 5112 835 5303 12383;12384;12385 8812;8813;8814 8813 3 568240 135360 GGAAVDPDSGLEHSAHVLEK EGINKSEKRMKLTLKGGAAVDPDSGLEHSA DPDSGLEHSAHVLEKGGKVFSATLGLVDIV K G G E K G 3 0 0 2 0 0 2 3 2 0 2 1 0 0 1 2 0 0 0 2 0 0 20 0 1987.9599 P09874 P09874 529 548 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 3.093E-05 141.59 By MS/MS 4 0 1 1 764100 764100 0 5113 521 5304 12386 8815 8815 1 20859 0 GGAEQFMEETER FTGCPKAKTCTFILRGGAEQFMEETERSLH ILRGGAEQFMEETERSLHDAIMIVRRAIKN R G G E R S 1 1 0 0 0 1 4 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 12 0 1382.5772 Q99832 Q99832 376 387 CCT7 T-complex protein 1 subunit eta yes yes 2 2.4392E-69 308.92 By MS/MS By MS/MS 5.3 2.69 2 2 2 2 2 3 2 2 2 1 19 1 127680000 127630000 43590 5114 2295 5305;5306 12387;12388;12389;12390;12391;12392;12393;12394;12395;12396;12397;12398;12399;12400;12401;12402;12403;12404;12405;12406 8816;8817;8818;8819;8820;8821;8822;8823;8824;8825;8826 8825 1439 11 1611300 133690 GGAGVGSMTK FYTRAASTARHLYLRGGAGVGSMTKIYGGR HLYLRGGAGVGSMTKIYGGRQRNGVMPSHF R G G T K I 1 0 0 0 0 0 0 4 0 0 0 1 1 0 0 1 1 0 0 1 0 0 10 0 863.4171 P39019 P39019 68 77 RPS19 40S ribosomal protein S19 yes yes 2 0.0062934 109.48 By MS/MS By matching 10 0 3 2 1 136870 106410 30466 5115 823 5307;5308 12407;12408;12409 8827;8828 8828 568 2 113100 781420 GGANLIK AFQTSEKKFHIGCEKGGANLIKELIDDFIF KFHIGCEKGGANLIKELIDDFIFPASNVYL K G G I K E 1 0 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 671.39662 Q93008;O00507 Q93008 1454 1460 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.015981 137.44 By MS/MS 3 0.816 1 1 1 3 1310800 1310800 0 5116 2096 5309 12410;12411;12412 8829 8829 1 52711 0 GGDCLTSQTR AFAAGIGWLITFCSKGGDCLTSQTRLRLSG TFCSKGGDCLTSQTRLRLSGMLDGLVNVGW K G G T R L 0 1 0 1 1 1 0 2 0 0 1 0 0 0 0 1 2 0 0 0 0 0 10 0 1093.4822 Q8IXB1 Q8IXB1 267 276 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 0.0012592 119.68 By MS/MS 5 0 1 1 897980 897980 0 5117 1870 5310 12413 8830 8830 1 36911 0 GGDDLGTEIANTLYR FVDCSASATPEFEGRGGDDLGTEIANTLYR GGDDLGTEIANTLYRIFNNKSSVDLKTLCI R G G Y R I 1 1 1 2 0 0 1 3 0 1 2 0 0 0 0 0 2 0 1 0 0 0 15 0 1593.7635 Q15024 Q15024 97 111 EXOSC7 Exosome complex component RRP42 yes yes 2 6.2607E-50 281.17 By MS/MS 8.5 0.5 1 1 2 807360 807360 0 5118 1465 5311 12414;12415 8831 8831 1 67382 0 GGDRGDRLDR EKAGDRGDRLERSERGGDRGDRLDRARTPA ERSERGGDRGDRLDRARTPATKRSFSKEVE R G G D R A 0 3 0 3 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 10 2 1115.5432 Q04637 Q04637 1167 1176 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.019809 90.149 By MS/MS By matching 2.33 0.471 2 1 2 1 7754500 7736900 17664 5119 1264 5312 12416;12417;12418 8832 8832 1 368610 14871 GGDRIPADLR INAEEVVVGDLVEVKGGDRIPADLRIISAN LVEVKGGDRIPADLRIISANGCKVDNSSLT K G G L R I 1 2 0 2 0 0 0 2 0 1 1 0 0 0 1 0 0 0 0 0 0 0 10 1 1068.5676 P05023 P05023 195 204 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.030164 75.229 By MS/MS 3 1.41 1 1 1 1 1 5 5082500 5082500 0 5120 463 5313 12419;12420;12421;12422;12423 8833;8834;8835 8833 3 182740 0 GGDSIGETPTPGASK PGHGSGWAETPRTDRGGDSIGETPTPGASK GGDSIGETPTPGASKRKSRWDETPASQMGG R G G S K R 1 0 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 15 0 1372.647 O75533 O75533 319 333 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0012667 117.95 By MS/MS By matching 3 0 2 1 1 946680 900670 46009 5121 315 5314 12424;12425 8836 8836 1 23512 65940 GGDVWVVAQNR SGGMGYPRLGGEGGKGGDVWVVAQNRMTLK EGGKGGDVWVVAQNRMTLKQLKDRYPRKRF K G G N R M 1 1 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 3 0 0 11 0 1199.6047 A4D1E9 A4D1E9 42 52 GTPBP10 GTP-binding protein 10 yes yes 2 0.0027886 117.01 By MS/MS 7 0 1 1 1840300 1840300 0 5122 14 5315 12426 8837 8837 1 32887 0 GGEGALQVLPPLVDVIPEAR EFAKELIRHNLVVFRGGEGALQVLPPLVDV LQVLPPLVDVIPEARLNLVIYYLRQDDVQE R G G A R L 2 1 0 1 0 1 2 3 0 1 3 0 0 0 3 0 0 0 0 3 0 0 20 0 2029.1208 A0AVF1 A0AVF1 269 288 TTC26 Intraflagellar transport protein 56 yes yes 2 0.00079052 106.19 By MS/MS 6 0 1 1 908790 908790 0 5123 5 5316 12427 8838 8838 1 7086.8 0 GGEICEQLR REAFLREVWQWKEAKGGEICEQLRALGASL QWKEAKGGEICEQLRALGASLDWDRECFTM K G G L R A 0 1 0 0 1 1 2 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1060.4971 Q5ST30 Q5ST30 226 234 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.020713 96.331 By MS/MS 4 0 1 1 1824100 1824100 0 5124 1619 5317 12428 8839 8839 1 49795 0 GGEIQPVSVK LQATVVAVGSGSKGKGGEIQPVSVKVGDKV GSKGKGGEIQPVSVKVGDKVLLPEYGGTKV K G G V K V 0 0 0 0 0 1 1 2 0 1 0 1 0 0 1 1 0 0 0 2 0 0 10 0 1012.5553 P61604 P61604 57 66 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.00093916 125.68 By MS/MS By matching 10 0 2 1 1 2370200 2297400 72779 5125 1102 5318 12429;12430 8840 8840 1 2441900 1866700 GGELIGNFVR SQFTRNALPALLIYKGGELIGNFVRVTDQL LLIYKGGELIGNFVRVTDQLGDDFFAVDLE K G G V R V 0 1 1 0 0 0 1 3 0 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1060.5665 Q13371 Q13371 241 250 PDCL Phosducin-like protein yes yes 2 0.010263 99.136 By MS/MS 7.5 0.5 1 1 2 752620 752620 0 5126 1361 5319 12431;12432 8841 8841 1 20236 0 GGEVLDSSHDDIKLEK SMQQQVNQQIPQEKRGGEVLDSSHDDIKLE GEVLDSSHDDIKLEKSNILLLGPTGSGKTL R G G E K S 0 0 0 3 0 0 2 2 1 1 2 2 0 0 0 2 0 0 0 1 0 0 16 1 1740.853 O76031 O76031 271 286 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 3 0.015104 73.415 By MS/MS By matching 5.67 0.471 1 2 2 1 11755000 11716000 38436 5127 344 5320 12433;12434;12435 8842;8843 8842 2 250380 117880 GGGAFVQNSQPVAVR GQHPAASPTHPSAIRGGGAFVQNSQPVAVR GGGAFVQNSQPVAVRGGGGKQV________ R G G V R G 2 1 1 0 0 2 0 3 0 0 0 0 0 1 1 1 0 0 0 3 0 0 15 0 1485.7688 P33176 P33176 942 956 KIF5B Kinesin-1 heavy chain yes yes 2 1.3589E-10 237.53 By MS/MS 4.5 1.12 1 1 1 1 4 5928400 5928400 0 5128 767 5321 12436;12437;12438;12439 8844 8844 1 143060 0 GGGALSAVAATK DVASVIVTKLDGHAKGGGALSAVAATKSPI HAKGGGALSAVAATKSPIIFIGTGEHIDDF K G G T K S 4 0 0 0 0 0 0 3 0 0 1 1 0 0 0 1 1 0 0 1 0 0 12 0 1001.5506 P61011 P61011 256 267 SRP54 Signal recognition particle 54 kDa protein yes yes 2 8.6833E-05 157.97 By MS/MS 6.5 0.5 1 1 2 8259400 8259400 0 5129 1082 5322 12440;12441 8845 8845 1 69614 0 GGGGGGFR ______________________________ SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR R G G F R G 0 1 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 0 8 0 663.30887 CON__P35908v2;CON__P35908;P35908;Q9NY12 CON__P35908v2 13 20 KRT2;GAR1 Keratin, type II cytoskeletal 2 epidermal;H/ACA ribonucleoprotein complex subunit 1 yes no 2 0.034077 97.596 By matching By MS/MS 3.5 1.66 1 1 2 1 3 574290 155650 418650 + 5130 52 5323 12442;12443;12444;12445 8846 8846 1 6397.7 796900 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR SVSTSHTTISGGGSRGGGGGGYGSGGSSYG GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG R G G G R G 0 1 0 0 0 0 0 21 0 0 0 0 0 0 0 6 0 0 3 0 0 0 31 0 2382.9446 P04264;CON__P04264 P04264 519 549 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 1.0743E-43 214.24 By MS/MS By MS/MS 4.55 2.74 3 3 3 3 4 1 1 1 1 2 10 12 9993500 6549700 3443800 + 5131 450;45 5324 12446;12447;12448;12449;12450;12451;12452;12453;12454;12455;12456;12457;12458;12459;12460;12461;12462;12463;12464;12465;12466;12467 8847;8848;8849;8850;8851;8852;8853;8854;8855;8856;8857;8858;8859;8860;8861;8862;8863;8864;8865;8866;8867 8864 21 903140 6180300 GGGGNFGPGPGSNFR SRSGRGGNFGFGDSRGGGGNFGPGPGSNFR GGGGNFGPGPGSNFRGGSDGYGSGRGFGDG R G G F R G 0 1 2 0 0 0 0 7 0 0 0 0 0 2 2 1 0 0 0 0 0 0 15 0 1376.6222 P22626 P22626 214 228 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.011506 117.09 By MS/MS 7.5 0.5 1 1 2 3987700 3987700 0 5132 661 5325 12468;12469 8868;8869;8870 8870 3 175850 0 GGGHVAQIYAIR GKERFAGVDIRVRVKGGGHVAQIYAIRQSI RVKGGGHVAQIYAIRQSISKALVAYYQKYV K G G I R Q 2 1 0 0 0 1 0 3 1 2 0 0 0 0 0 0 0 0 1 1 0 0 12 0 1240.6677 P62249 P62249 74 85 RPS16 40S ribosomal protein S16 yes yes 2;3 0.022542 104.2 By MS/MS 9.67 0.471 1 2 3 2854800 2854800 0 5133 1120 5326 12470;12471;12472 8871;8872 8872 2 2850600 0 GGGKDVSAQATGK ASEWVQQVSGLMDGKGGGKDVSAQATGKNV GKGGGKDVSAQATGKNVGCLQEALQLATSF K G G G K N 2 0 0 1 0 1 0 4 0 0 0 2 0 0 0 1 1 0 0 1 0 0 13 1 1174.5942 P49588 P49588 931 943 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 5.298E-05 174.23 By MS/MS 6 2 1 1 2 454150 454150 0 5134 921 5327 12473;12474 8873;8874 8873 2 18212 0 GGGLFLLAGPPASVETLGPR GSEETLLFLTVGDEKGGGLFLLAGPPASVE LLAGPPASVETLGPRVAEVLEGKGAGKKGR K G G P R V 2 1 0 0 0 0 1 5 0 0 4 0 0 1 3 1 1 0 0 1 0 0 20 0 1908.0469 Q9BTE6 Q9BTE6 349 368 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 2 5.3462E-05 120.6 By MS/MS 6 0 1 1 942360 942360 0 5135 2350 5328 12475 8875 8875 1 7348.6 0 GGGLGSPGEGGALPR VLMNFLRGDAGRLARGGGLGSPGEGGALPR GGGLGSPGEGGALPRCRPLQFASQKEVVLY R G G P R C 1 1 0 0 0 0 1 7 0 0 2 0 0 0 2 1 0 0 0 0 0 0 15 0 1280.6473 Q7Z7A3 Q7Z7A3 195 209 CTU1 Cytoplasmic tRNA 2-thiolation protein 1 yes yes 2 0.003694 109.16 By MS/MS 8 0 1 1 603900 603900 0 5136 1806 5329 12476 8876 8876 1 39839 0 GGGPAGAGGEAPAALR LCAVSGPRQAEGGERGGGPAGAGGEAPAAL GGPAGAGGEAPAALRGRLLCDFRRAPFAGR R G G L R G 5 1 0 0 0 0 1 6 0 0 1 0 0 0 2 0 0 0 0 0 0 0 16 0 1307.6582 Q5RKV6 Q5RKV6 78 93 EXOSC6 Exosome complex component MTR3 yes yes 2 8.3271E-10 139.32 By MS/MS 8 0 1 1 0 0 0 5137 1615 5330 12477 8877 8877 1 0 0 GGGQIIPTAR FDVHDVTLHADAIHRGGGQIIPTARRCLYA DAIHRGGGQIIPTARRCLYASVLTAQPRLM R G G A R R 1 1 0 0 0 1 0 3 0 2 0 0 0 0 1 0 1 0 0 0 0 0 10 0 968.54033 P13639;Q15029 P13639 717 726 EEF2;EFTUD2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 2 0.020444 92.051 By MS/MS By matching 6.67 1.49 2 1 1 1 1 5 1 9405000 9383900 21119 5138 576;1466 5331 12478;12479;12480;12481;12482;12483 8878;8879 8878 2 417510 62492 GGGVAHGPR TGRARHGSIRSPLWRGGGVAHGPRGPTSYY RSPLWRGGGVAHGPRGPTSYYYMLPMKVRA R G G P R G 1 1 0 0 0 0 0 4 1 0 0 0 0 0 1 0 0 0 0 1 0 0 9 0 806.41473 Q9BYD3 Q9BYD3 148 156 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 0.042101 84.244 By MS/MS 8.5 0.5 1 1 2 669260 669260 0 5139 2414 5332 12484;12485 8880 8880 1 56753 0 GGHDILVR DNKNTHTLLLAGVFRGGHDILVRSRLLLLD LLAGVFRGGHDILVRSRLLLLDTVTMQVTA R G G V R S 0 1 0 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 865.477 Q9Y678 Q9Y678 836 843 COPG1 Coatomer subunit gamma-1 yes yes 2 0.021557 104.75 By MS/MS 4 0 1 1 1869400 1869400 0 5140 2996 5333 12486 8881 8881 1 51034 0 GGHFYSAKPEILR LLKPYTGSKSKEAQKGGHFYSAKPEILRAM QKGGHFYSAKPEILRAMQRADEALNKDKIK K G G L R A 1 1 0 0 0 0 1 2 1 1 1 1 0 1 1 1 0 0 1 0 0 0 13 1 1473.7728 P52701 P52701 162 174 MSH6 DNA mismatch repair protein Msh6 yes yes 3 0.031792 64.224 By MS/MS 3 0 1 1 793230 793230 0 5141 989 5334 12487 8882 8882 1 20707 0 GGHIAKDCK KDCDLQEDACYNCGRGGHIAKDCKEPKRER CYNCGRGGHIAKDCKEPKREREQCCYNCGK R G G C K E 1 0 0 1 1 0 0 2 1 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 984.4811 P62633 P62633 80 88 CNBP Cellular nucleic acid-binding protein yes yes 2 0.018706 124.08 By MS/MS 9.5 0.5 1 1 2 78614 78614 0 5142 1138 5335 12488;12489 8883 8883 1 50775 0 GGILDTAIVDR SAEDASCVVTFKGHKGGILDTAIVDRGRNV KGHKGGILDTAIVDRGRNVVSASRDGTARL K G G D R G 1 1 0 2 0 0 0 2 0 2 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1128.6139 Q9BRP4 Q9BRP4 177 187 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 2 0.00018827 155.42 By MS/MS 7 0.816 1 1 1 3 1673100 1673100 0 5143 2326 5336 12490;12491;12492 8884 8884 1 30880 0 GGIVDEGALLR FAQCKKGVRVVNCARGGIVDEGALLRALQS NCARGGIVDEGALLRALQSGQCAGAALDVF R G G L R A 1 1 0 1 0 0 1 3 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1098.6033 O43175 O43175 237 247 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 3.1067E-05 172.25 By MS/MS By MS/MS 6.71 1.28 1 3 1 1 1 6 1 121650000 121450000 201870 5144 185 5337 12493;12494;12495;12496;12497;12498;12499 8885;8886;8887;8888;8889;8890;8891 8888 7 1257400 619120 GGIVGMTLPIAR AFEGQVGQAAYSASKGGIVGMTLPIARDLA ASKGGIVGMTLPIARDLAPIGIRVMTIAPG K G G A R D 1 1 0 0 0 0 0 3 0 2 1 0 1 0 1 0 1 0 0 1 0 0 12 0 1183.6747 Q99714 Q99714 173 184 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 1.0202E-07 191.17 By MS/MS 8.5 0.5 1 1 2 5995100 5995100 0 5145 2285 5338 12500;12501 8892;8893 8892 1435 2 1299700 0 GGLGLILK YIENKEEKTPLQVAKGGLGLILKRMVEG__ TPLQVAKGGLGLILKRMVEG__________ K G G L K R 0 0 0 0 0 0 0 3 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 769.50617 O75832 O75832 214 221 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 2 0.01511 113.08 By MS/MS 8.5 0.5 1 1 2 1258200 1258200 0 5146 332 5339 12502;12503 8894 8894 1 613550 0 GGLPLDGITELAGR QRLSLGCPVLDALLRGGLPLDGITELAGRS RGGLPLDGITELAGRSSAGKTQLALQLCLA R G G G R S 1 1 0 1 0 0 1 4 0 1 3 0 0 0 1 0 1 0 0 0 0 0 14 0 1367.7409 O43542 O43542 95 108 XRCC3 DNA repair protein XRCC3 yes yes 2 6.3804E-05 152.7 By MS/MS 7.5 0.5 1 1 2 370070 370070 0 5147 206 5340 12504;12505 8895;8896 8896 2 15951 0 GGLQEVADQLDLQR IYDVKYLMKSCKNLKGGLQEVADQLDLQRI KGGLQEVADQLDLQRIGRQHQAGSDSLLTG K G G Q R I 1 1 0 2 0 3 1 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 14 0 1540.7845 Q9UFF9 Q9UFF9 207 220 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 2 9.3376E-26 242.45 By MS/MS 8 0 1 1 391660 391660 0 5148 2766 5341 12506 8897 8897 1 25838 0 GGNASGEPGLDQR SNGSDGGEASRGPWKGGNASGEPGLDQRAK WKGGNASGEPGLDQRAKQPPSTFVPQINRN K G G Q R A 1 1 1 1 0 1 1 4 0 0 1 0 0 0 1 1 0 0 0 0 0 0 13 0 1256.5745 Q7LBC6 Q7LBC6 326 338 KDM3B Lysine-specific demethylase 3B yes yes 2 0.0039055 109.39 By MS/MS 2 0 1 1 226900 226900 0 5149 1772 5342 12507 8898 8898 1 11278 0 GGNIGDGGGAADR CVLFFDELDSIAKARGGNIGDGGGAADRVI ARGGNIGDGGGAADRVINQILTEMDGMSTK R G G D R V 2 1 1 2 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 13 0 1115.4956 P55072 P55072 587 599 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.031567 78.513 By matching By MS/MS 4 0 2 1 1 229730 211980 17746 5150 1026 5343 12508;12509 8899 8899 1 5786.8 37081 GGNPFLFR RFCEDWMQAFLNGAKGGNPFLFRQVLENFK AFLNGAKGGNPFLFRQVLENFKLKAIQDTN K G G F R Q 0 1 1 0 0 0 0 2 0 0 1 0 0 2 1 0 0 0 0 0 0 0 8 0 906.47119 Q9HAS0 Q9HAS0 309 316 C17orf75 Protein Njmu-R1 yes yes 2 0.0094613 120.65 By MS/MS 7 0 1 1 700500 700500 0 5151 2543 5344 12510 8900 8900 1 12518 0 GGNQTSGIDFFITQER RTYVFRAQSAEMKERGGNQTSGIDFFITQE GNQTSGIDFFITQERIVFLDTQPILSPSIL R G G E R I 0 1 1 1 0 2 1 3 0 2 0 0 0 2 0 1 2 0 0 0 0 0 16 0 1768.838 Q9H0W8 Q9H0W8 249 264 SMG9 Protein SMG9 yes yes 2 2.0962E-06 175.6 By MS/MS 6 0 1 1 1281500 1281500 0 5152 2461 5345 12511 8901 8901 1 9993.1 0 GGPAGPYQQSQR MLEWAGIPPDESPRRGGPAGPYQQSQRLEL PRRGGPAGPYQQSQRLELYAQATEALLKTG R G G Q R L 1 1 0 0 0 3 0 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 12 0 1244.5898 Q5JPH6 Q5JPH6 109 120 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.014015 92.538 By MS/MS 9 0 1 1 98446 98446 0 5153 1604 5346 12512 8902 8902 1 56499 0 GGPASVPSSSPGTSVK SPARGPSGSPRTQGRGGPASVPSSSPGTSV GPASVPSSSPGTSVKKPDPNIKNNAASEGV R G G V K K 1 0 0 0 0 0 0 3 0 0 0 1 0 0 3 5 1 0 0 2 0 0 16 0 1413.71 O43237 O43237 398 413 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 2 0.00053214 121.02 By MS/MS By matching 6 0 2 1 1 1875800 1867000 8774.8 5154 186 5347 12513;12514 8903 8903 1 14559 26912 GGPDFSNLEK GFDFSGAEISGNYTKGGPDFSNLEK_____ GNYTKGGPDFSNLEK_______________ K G G E K - 0 0 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 0 0 0 0 0 10 0 1062.4982 Q8WVJ2 Q8WVJ2 148 157 NUDCD2 NudC domain-containing protein 2 yes yes 2 0.00075985 133.99 By MS/MS 10 0 1 1 609950 609950 0 5155 2031 5348 12515 8904 8904 1 648320 0 GGPEPTPLVQTFLR PLPPELQPLLEGEVKGGPEPTPLVQTFLRR KGGPEPTPLVQTFLRRQQRLQEIERRRNTP K G G L R R 0 1 0 0 0 1 1 2 0 0 2 0 0 1 3 0 2 0 0 1 0 0 14 0 1510.8144 P38435 P38435 648 661 GGCX Vitamin K-dependent gamma-carboxylase yes yes 2 0.016491 84.507 By MS/MS 4 2 1 1 1 1 1 1 1 7 811580 811580 0 5156 818 5349 12516;12517;12518;12519;12520;12521;12522 8905;8906 8905 2 21339 0 GGPEVQQVPAGER TAMPFRGYAVLGGERGGPEVQQVPAGERPL ERGGPEVQQVPAGERPLWFICSGMGTQWRG R G G E R P 1 1 0 0 0 2 2 3 0 0 0 0 0 0 2 0 0 0 0 2 0 0 13 0 1322.6579 P49327 P49327 478 490 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00041752 155.99 By MS/MS 2.5 1.12 1 1 1 1 4 3206500 3206500 0 5157 915 5350 12523;12524;12525;12526 8907;8908;8909;8910 8910 4 128060 0 GGPGGELPR ANLGRTTLSTRGPPRGGPGGELPRGPAGLG TRGPPRGGPGGELPRGPAGLGPRRSQQGPR R G G P R G 0 1 0 0 0 0 1 4 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 838.42972 Q04637 Q04637 686 694 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.004231 117.4 By MS/MS 3 1.41 1 1 1 1 1 5 18823000 18823000 0 5158 1264 5351 12527;12528;12529;12530;12531 8911;8912;8913;8914 8912 4 844300 0 GGPLQALTR QAGITETEWTSGSSKGGPLQALTRESTRGS TSGSSKGGPLQALTRESTRGSRRTPRKRVE K G G T R E 1 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 0 911.51886 P42167 P42167 240 248 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 0.011496 101.54 By MS/MS By matching 6.33 0.471 2 1 2 1 2541000 2502700 38300 5159 846 5352 12532;12533;12534 8915 8915 1 21060 117460 GGPNIITLADIVK KKKIKREIKILENLRGGPNIITLADIVKDP LRGGPNIITLADIVKDPVSRTPALVFEHVN R G G V K D 1 0 1 1 0 0 0 2 0 3 1 1 0 0 1 0 1 0 0 1 0 0 13 0 1309.7606 Q8NEV1;P68400 Q8NEV1 90 102 CSNK2A3;CSNK2A1 Casein kinase II subunit alpha 3;Casein kinase II subunit alpha yes no 2 0.0006409 135.8 By MS/MS 7 0 1 1 243030 243030 0 5160 1188 5353 12535 8916 8916 1 4342.9 0 GGPNYQEGLR QGPLKEHEVTIFVRRGGPNYQEGLRVMGEV IFVRRGGPNYQEGLRVMGEVGKTTGIPIHV R G G L R V 0 1 1 0 0 1 1 3 0 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1089.5203 P53396 P53396 380 389 ACLY ATP-citrate synthase yes yes 2 3.0789E-06 176.6 By MS/MS 3 1.58 1 1 1 1 4 15154000 15154000 0 5161 1001 5354 12536;12537;12538;12539 8917;8918;8919;8920 8920 4 482080 0 GGPTVDPEELFR GFDPGASGSQHSYWKGGPTVDPEELFRKIF YWKGGPTVDPEELFRKIFGEFSSSSFGDFQ K G G F R K 0 1 0 1 0 0 2 2 0 0 1 0 0 1 2 0 1 0 0 1 0 0 12 0 1315.6408 Q96EY1 Q96EY1 176 187 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.0019111 122.94 By MS/MS 8.17 1.07 2 2 1 1 6 55374000 55374000 0 5162 2169 5355 12540;12541;12542;12543;12544;12545 8921;8922;8923;8924 8921 4 1342500 0 GGPTVDPEELFRK GFDPGASGSQHSYWKGGPTVDPEELFRKIF WKGGPTVDPEELFRKIFGEFSSSSFGDFQT K G G R K I 0 1 0 1 0 0 2 2 0 0 1 1 0 1 2 0 1 0 0 1 0 0 13 1 1443.7358 Q96EY1 Q96EY1 176 188 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.0066679 143.4 By MS/MS 7 0 1 1 2957700 2957700 0 5163 2169 5356 12546 8925;8926 8926 2 52854 0 GGRGDVGSADIQDLEK SQLPLKVEFLECSAKGGRGDVGSADIQDLE GRGDVGSADIQDLEKWLAKIA_________ K G G E K W 1 1 0 3 0 1 1 4 0 1 1 1 0 0 0 1 0 0 0 1 0 0 16 1 1615.7802 Q9Y5M8 Q9Y5M8 250 265 SRPRB Signal recognition particle receptor subunit beta yes yes 2;3 5.0315E-05 144.88 By MS/MS By matching 8.4 0.49 3 2 4 1 9990700 9967900 22775 5164 2976 5357 12547;12548;12549;12550;12551 8927;8928;8929 8928 3 1063600 194300 GGSDDSSKDPIDVNYEK LDNLLDIEVAYSLLRGGSDDSSKDPIDVNY SDDSSKDPIDVNYEKLKTDIKVVDRDSEEA R G G E K L 0 0 1 4 0 0 1 2 0 1 0 2 0 0 1 3 0 0 1 1 0 0 17 1 1824.8014 P09874 P09874 780 796 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 1.6903E-32 242.07 By MS/MS 5 0.816 2 2 2 6 10502000 10502000 0 5165 521 5358 12552;12553;12554;12555;12556;12557 8930;8931;8932 8932 3 264910 0 GGSDPETTGIQIWSEVFTVEKPGGK WLGDPEEPLTGFSWRGGSDPETTGIQIWSE QIWSEVFTVEKPGGKKVAVVLMDTQGAFDS R G G G K K 0 0 0 1 0 1 3 5 0 2 0 2 0 1 2 2 3 1 0 2 0 0 25 1 2618.2864 Q6DD88 Q6DD88 110 134 ATL3 Atlastin-3 yes yes 3 0.0013945 64.749 By MS/MS 6 0 1 1 1000800 1000800 0 5166 1677 5359 12558 8933;8934 8933 2 7804.4 0 GGSGGGGGGSSGGRGSGGGSSGGSIGGR GHGSYGSGSSSGGYRGGSGGGGGGSSGGRG RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS R G G G R G 0 2 0 0 0 0 0 18 0 1 0 0 0 0 0 7 0 0 0 0 0 0 28 1 2078.9074 P04264;CON__P04264 P04264 589 616 KRT1 Keratin, type II cytoskeletal 1 no no 3 3.8276E-06 88.829 By MS/MS By MS/MS 5.55 3.14 1 2 2 1 1 1 1 2 4 7 1671700 891820 779840 + 5167 450;45 5360 12559;12560;12561;12562;12563;12564;12565;12566;12567;12568;12569 8935;8936;8937;8938;8939 8937 5 82598 3612400 GGSGGGGSISGGGYGSGGGSGGR GSSSYGSGGRQSGSRGGSGGGGSISGGGYG ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R G G G R Y 0 1 0 0 0 0 0 15 0 1 0 0 0 0 0 5 0 0 1 0 0 0 23 0 1740.7412 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 550 572 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 1.9009E-48 249.54 By MS/MS By MS/MS 5.35 3.09 2 2 2 2 2 1 2 2 2 8 9 14788000 11032000 3755500 + 5168 52 5361 12570;12571;12572;12573;12574;12575;12576;12577;12578;12579;12580;12581;12582;12583;12584;12585;12586 8940;8941;8942;8943;8944;8945;8946;8947;8948;8949;8950;8951;8952;8953;8954;8955;8956;8957;8958;8959;8960 8959 21 1615900 21513000 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG EASGSGGGYGGGSGKSSHS___________ R G G G K S 1 0 0 0 0 0 3 23 1 0 0 1 0 1 0 8 0 0 2 0 0 0 40 0 3222.2743 P35527;CON__P35527 P35527 580 619 KRT9 Keratin, type I cytoskeletal 9 yes no 3 2.6552E-19 114.77 By MS/MS By MS/MS 5.23 2.72 1 1 2 2 2 1 1 2 1 5 8 9857100 6701700 3155400 + 5169 791 5362 12587;12588;12589;12590;12591;12592;12593;12594;12595;12596;12597;12598;12599 8961;8962;8963;8964;8965;8966;8967;8968;8969;8970;8971;8972;8973;8974;8975;8976;8977 8966 17 658210 9462900 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG SGGGYGGGSGKSSHS_______________ R G G H S - 1 0 0 0 0 0 3 23 2 0 0 1 0 1 0 11 0 0 2 0 0 0 44 1 3620.4293 P35527;CON__P35527 P35527 580 623 KRT9 Keratin, type I cytoskeletal 9 yes no 3;4 0.00012262 47.381 By matching By MS/MS 2.71 1.39 2 1 2 1 1 3 4 6225200 1068200 5157000 + 5170 791 5363 12600;12601;12602;12603;12604;12605;12606 8978;8979;8980;8981 8979 4 37716 5223900 GGSGGSYGGGGSGGGYGGGSGSR GGRGGSGGSYGRGSRGGSGGSYGGGGSGGG GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G G S R G 0 1 0 0 0 0 0 15 0 0 0 0 0 0 0 5 0 0 2 0 0 0 23 0 1790.7204 P35527;CON__P35527 P35527 491 513 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 1.0288E-58 265.43 By MS/MS By MS/MS 5.25 3.03 3 2 2 2 2 1 2 2 2 2 9 11 29414000 15824000 13589000 + 5171 791 5364 12607;12608;12609;12610;12611;12612;12613;12614;12615;12616;12617;12618;12619;12620;12621;12622;12623;12624;12625;12626 8982;8983;8984;8985;8986;8987;8988;8989;8990;8991;8992;8993;8994;8995;8996;8997;8998;8999;9000;9001;9002;9003;9004 9000 23 2462500 47352000 GGSGGSYGR DFESSGAGKIGLGGRGGSGGSYGRGSRGGS IGLGGRGGSGGSYGRGSRGGSGGSYGGGGS R G G G R G 0 1 0 0 0 0 0 5 0 0 0 0 0 0 0 2 0 0 1 0 0 0 9 0 796.34638 P35527;CON__P35527 P35527 479 487 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.00060318 151.04 By MS/MS By MS/MS 5.31 2.89 2 1 1 1 2 1 1 2 1 1 5 8 7918100 1512800 6405300 + 5172 791 5365 12627;12628;12629;12630;12631;12632;12633;12634;12635;12636;12637;12638;12639 9005;9006;9007;9008;9009;9010;9011;9012 9009 8 508910 13251000 GGSGSGPTIEEVD AGGPGPGGFGAQGPKGGSGSGPTIEEVD__ PKGGSGSGPTIEEVD_______________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 P0DMV9;P0DMV8 P0DMV9 629 641 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 9.4315E-05 155.42 By MS/MS 5 0 1 1 3366900 3366900 0 5173 528 5366 12640 9013 9013 1 138390 0 GGSISGGGYGSGGGK GGGSGGRYGSGGGSKGGSISGGGYGSGGGK GGSISGGGYGSGGGKHSSGGGSRGGSSSGG K G G G K H 0 0 0 0 0 0 0 9 0 1 0 1 0 0 0 3 0 0 1 0 0 0 15 0 1196.5422 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 581 595 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 2.0199E-14 205.12 By MS/MS By MS/MS 4.88 2.78 2 2 2 2 2 1 1 2 1 1 8 8 19570000 12290000 7280100 + 5174 52 5367 12641;12642;12643;12644;12645;12646;12647;12648;12649;12650;12651;12652;12653;12654;12655;12656 9014;9015;9016;9017;9018;9019;9020;9021;9022;9023;9024;9025;9026;9027;9028 9023 15 3156900 17217000 GGSRGEEVGELSR VQTGLDLLEILRQEKGGSRGEEVGELSRGK EKGGSRGEEVGELSRGKLYSLGNGRWMLTL K G G S R G 0 2 0 0 0 0 3 4 0 0 1 0 0 0 0 2 0 0 0 1 0 0 13 1 1331.643 P09543 P09543 357 369 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2;3 0.021099 135.1 By MS/MS 6.67 0.471 1 2 3 9085100 9085100 0 5175 516 5368 12657;12658;12659 9029;9030 9029 2 149880 0 GGSSSGGGYGSGGGGSSSVK YGSGGGKHSSGGGSRGGSSSGGGYGSGGGG GGGYGSGGGGSSSVKGSSGEAFGSSVTFSF R G G V K G 0 0 0 0 0 0 0 10 0 0 0 1 0 0 0 7 0 0 1 1 0 0 20 0 1587.6761 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 604 623 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.4106E-31 219.95 By MS/MS By MS/MS 5.29 2.99 2 2 2 2 1 1 2 2 1 2 9 8 10818000 7483200 3335100 + 5176 52 5369 12660;12661;12662;12663;12664;12665;12666;12667;12668;12669;12670;12671;12672;12673;12674;12675;12676 9031;9032;9033;9034;9035;9036;9037;9038;9039;9040;9041;9042;9043;9044 9042 14 1861600 15199000 GGSVYPDICTISLVAVSDVNK MLDSVLYAKNKYLAKGGSVYPDICTISLVA DICTISLVAVSDVNKHADRIAFWDDVYGFK K G G N K H 1 0 1 2 1 0 0 2 0 2 1 1 0 0 1 3 1 0 1 4 0 0 21 0 2193.0987 O60678 O60678 355 375 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 1.5837E-12 161.04 By MS/MS 6 0 1 1 680760 680760 0 5177 257 5370 12677 9045 9045 1 5308.6 0 GGSWIQEINVAEK PSFDWKNFEQKMLKKGGSWIQEINVAEKNW KKGGSWIQEINVAEKNWYPRQKICYAKRKL K G G E K N 1 0 1 0 0 1 2 2 0 2 0 1 0 0 0 1 0 1 0 1 0 0 13 0 1429.7201 P78527 P78527 4024 4036 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.336E-18 229 By MS/MS 2 0.816 1 1 1 3 1424400 1424400 0 5178 1197 5371 12678;12679;12680 9046;9047;9048 9048 3 49322 0 GGTGFAGSGVK TGDKLTDRDIIVLQRGGTGFAGSGVKLQAE VLQRGGTGFAGSGVKLQAEKSRPVMQA___ R G G V K L 1 0 0 0 0 0 0 5 0 0 0 1 0 1 0 1 1 0 0 1 0 0 11 0 936.46649 Q9Y314 Q9Y314 279 289 NOSIP Nitric oxide synthase-interacting protein yes yes 2 0.05402 75.652 By MS/MS 8 0 1 1 1532500 1532500 0 5179 2911 5372 12681 9049 9049 1 101100 0 GGTLLSVTGEVEPR PTPRGLLGDAPNDPRGGTLLSVTGEVEPRG RGGTLLSVTGEVEPRGYLGPPHQGPPMHHV R G G P R G 0 1 0 0 0 0 2 3 0 0 2 0 0 0 1 1 2 0 0 2 0 0 14 0 1413.7464 P33240;Q9H0L4 P33240 331 344 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant yes no 2 5.8107E-18 220.1 By MS/MS 5 0 1 1 1128500 1128500 0 5180 768 5373 12682 9050 9050 1 46385 0 GGVAEACPNIR EVSLRNCAVSCAGEKGGVAEACPNIRKVDL AGEKGGVAEACPNIRKVDLSKNLLSSWDEV K G G I R K 2 1 1 0 1 0 1 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 11 0 1142.5502 Q15813 Q15813 146 156 TBCE Tubulin-specific chaperone E yes yes 2 0.0015852 125.82 By MS/MS 6 0 1 1 1058200 1058200 0 5181 1524 5374 12683 9051 9051 1 8252.2 0 GGVEEGPTVLR TIGIIGAPFSKGQPRGGVEEGPTVLRKAGL GQPRGGVEEGPTVLRKAGLLEKLKEQECDV R G G L R K 0 1 0 0 0 0 2 3 0 0 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1112.5826 P05089 P05089 22 32 ARG1 Arginase-1 yes yes 2 0.003102 123.35 By matching By MS/MS 4.9 2.47 1 1 1 2 1 1 1 1 1 2 8 909420 488280 421150 5182 466 5375 12684;12685;12686;12687;12688;12689;12690;12691;12692;12693 9052;9053;9054;9055;9056;9057;9058 9053 6 74593 894770 GGVSGFGVPPASMR LSTPQFLYRWLPSRRGGVSGFGVPPASMRR RGGVSGFGVPPASMRRAADQNGGGGRHNWG R G G M R R 1 1 0 0 0 0 0 4 0 0 0 0 1 1 2 2 0 0 0 2 0 0 14 0 1317.65 Q9BUN8 Q9BUN8 215 228 DERL1 Derlin-1 yes yes 2 0.036229 68.355 By MS/MS 1.5 0.5 1 1 2 323120 323120 0 5183 2365 5376 12694;12695 9059 9059 1475 1 15877 0 GGVVLKEDALPGQK LNDSATEVTGHRWLKGGVVLKEDALPGQKT KGGVVLKEDALPGQKTEFKVDSDDQWGEYS K G G Q K T 1 0 0 1 0 1 1 3 0 0 2 2 0 0 1 0 0 0 0 2 0 0 14 1 1409.7878 P35613 P35613 174 187 BSG Basigin yes yes 2 0.00078628 147.26 By MS/MS 7 0.816 1 1 1 3 9696300 9696300 0 5184 797 5377 12696;12697;12698 9060;9061 9061 2 186010 0 GGYDLLVR ENKNSHSLYLAGIFRGGYDLLVRSRLALAD YLAGIFRGGYDLLVRSRLALADGVTMQVTV R G G V R S 0 1 0 1 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 1 0 0 8 0 891.48142 Q9UBF2 Q9UBF2 833 840 COPG2 Coatomer subunit gamma-2 yes yes 2 0.0072883 128.57 By MS/MS 4.5 0.5 1 1 2 2464500 2464500 0 5185 2748 5378 12699;12700 9062;9063 9063 2 92302 0 GGYIGSTYFER NNRRLFEQNVQRSMRGGYIGSTYFERCLK_ RSMRGGYIGSTYFERCLK____________ R G G E R C 0 1 0 0 0 0 1 3 0 1 0 0 0 1 0 1 1 0 2 0 0 0 11 0 1248.5775 P61081 P61081 170 180 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 9.1271E-07 179.51 By MS/MS 9.5 0.5 1 1 2 2301800 2301800 0 5186 1086 5379 12701;12702 9064;9065 9064 2 1450700 0 GGYRQQQSQTAY DQKDGYRKNEGYMRRGGYRQQQSQTAY___ MRRGGYRQQQSQTAY_______________ R G G A Y - 1 1 0 0 0 4 0 2 0 0 0 0 0 0 0 1 1 0 2 0 0 0 12 1 1385.6324 Q99613;B5ME19 Q99613 902 913 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.039819 104.22 By MS/MS By matching 4 0 2 1 1 1313900 1242200 71741 5187 2275 5380 12703;12704 9066 9066 1 33911 149910 GGYTSGTFR RVQVVGTYRCLPGKKGGYTSGTFRTVLIAC CLPGKKGGYTSGTFRTVLIACNVKQMSKDA K G G F R T 0 1 0 0 0 0 0 3 0 0 0 0 0 1 0 1 2 0 1 0 0 0 9 0 944.43519 P25205 P25205 249 257 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.002709 122.18 By MS/MS 4 0 1 1 1929600 1929600 0 5188 683 5381 12705 9067 9067 1 52675 0 GHALLIDCR PCGIMDQFISLMGQKGHALLIDCRSLETSL SLMGQKGHALLIDCRSLETSLVPLSDPKLA K G H C R S 1 1 0 1 1 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1053.5389 P51570 P51570 196 204 GALK1 Galactokinase yes yes 2 0.0033715 119.27 By MS/MS 7 0 1 1 1703500 1703500 0 5189 967 5382 12706 9068 9068 1 30442 0 GHASAPYFGKEEPSVAPSSTGK TSEELLPPPVQTQIKGHASAPYFGKEEPSV FGKEEPSVAPSSTGKTFQPGSWMPRDGKSH K G H G K T 3 0 0 0 0 0 2 3 1 0 0 2 0 1 3 4 1 0 1 1 0 0 22 1 2203.0546 Q8N183 Q8N183 131 152 NDUFAF2 Mimitin, mitochondrial yes yes 3 0.0030581 71.592 By MS/MS 9 0 1 1 401360 401360 0 5190 1896 5383 12707 9069 9069 1 230340 0 GHAVGDIPGVR IEENDEVLVAGFGRKGHAVGDIPGVRFKVV FGRKGHAVGDIPGVRFKVVKVANVSLLALY K G H V R F 1 1 0 1 0 0 0 3 1 1 0 0 0 0 1 0 0 0 0 2 0 0 11 0 1076.5727 P62266 P62266 109 119 RPS23 40S ribosomal protein S23 yes yes 2 0.022081 87.476 By MS/MS 9.5 0.5 1 1 2 379380 379380 0 5191 1123 5384 12708;12709 9070 9070 1 338050 0 GHFGPINSVAFHPDGK RFFHLAFEEEFGRVKGHFGPINSVAFHPDG HFGPINSVAFHPDGKSYSSGGEDGYVRIHY K G H G K S 1 0 1 1 0 0 0 3 2 1 0 1 0 2 2 1 0 0 0 1 0 0 16 0 1678.8216 Q13347 Q13347 283 298 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 3 0.0057559 91.969 By MS/MS 7 0.816 1 1 1 3 7289100 7289100 0 5192 1358 5385 12710;12711;12712 9071 9071 1 299860 0 GHGLQELKAELDAAVLK YSPTEPNVVPVSALRGHGLQELKAELDAAV GLQELKAELDAAVLKATGRQILTLRVRLAG R G H L K A 3 0 0 1 0 1 2 2 1 0 4 2 0 0 0 0 0 0 0 1 0 0 17 1 1790.989 O43824 O43824 441 457 GTPBP6 Putative GTP-binding protein 6 yes yes 3 0.0040603 94.569 By MS/MS 6 0 1 1 1474800 1474800 0 5193 228 5386 12713 9072 9072 1 11501 0 GHLENNPALEK VVLMGKNTMMRKAIRGHLENNPALEKLLPH KAIRGHLENNPALEKLLPHIWGNVGFVFTK R G H E K L 1 0 2 0 0 0 2 1 1 0 2 1 0 0 1 0 0 0 0 0 0 0 11 0 1220.6149 Q8NHW5;P05388 Q8NHW5 67 77 RPLP0P6;RPLP0 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2;3 9.6755E-07 178.54 By MS/MS By matching 8 0 3 2 1 3511200 3481400 29883 5194 473 5387 12714;12715;12716 9073;9074 9073 2 229660 254940 GHPHSASSPSER PALPATMNNSSSETRGHPHSASSPSERVFP ETRGHPHSASSPSERVFPMPLPRKAPLNIP R G H E R V 1 1 0 0 0 0 1 1 2 0 0 0 0 0 2 4 0 0 0 0 0 0 12 0 1247.5643 Q15003 Q15003 21 32 NCAPH Condensin complex subunit 2 yes yes 2 0.039977 77.533 By MS/MS 4.5 0.5 1 1 2 137570 137570 0 5195 1457 5388 12717;12718 9075 9075 1 4029 0 GHQLLSADVDIK KGRLQILHIHTARMRGHQLLSADVDIKELA RMRGHQLLSADVDIKELAVETKNFSGAELE R G H I K E 1 0 0 2 0 1 0 1 1 1 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1294.6881 P46459 P46459 416 427 NSF Vesicle-fusing ATPase yes yes 2 0.0020848 120.96 By MS/MS 5 0 1 1 883800 883800 0 5196 881 5389 12719 9076 9076 1 36328 0 GHRLSPADDELYQR SLRCPPVELPWAPRRGHRLSPADDELYQRT RGHRLSPADDELYQRTRISLLQREAAQAMY R G H Q R T 1 2 0 2 0 1 1 1 1 0 2 0 0 0 1 1 0 0 1 0 0 0 14 1 1655.8016 Q9BU61 Q9BU61 31 44 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 3 0.0045502 94.673 By MS/MS 10 0 2 2 1881600 1881600 0 5197 2360 5390 12720;12721 9077;9078 9078 2 2000000 0 GHSCYRPR QGVLTHGRVRLLLSKGHSCYRPRRTGERKR VRLLLSKGHSCYRPRRTGERKRKSVRGCIV K G H P R R 0 2 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 8 1 1031.4719 P62753 P62753 80 87 RPS6 40S ribosomal protein S6 yes yes 2 0.011508 144.83 By MS/MS 8 0 1 1 0 0 0 5198 1143 5391 12722 9079 9079 1 0 0 GHSEKEVADAIR HVSWDEYKVKFLASKGHSEKEVADAIRLNE ASKGHSEKEVADAIRLNEELKVDEETQEVL K G H I R L 2 1 0 1 0 0 2 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 12 1 1310.6579 Q9BRK5 Q9BRK5 171 182 SDF4 45 kDa calcium-binding protein yes yes 2;3 1.329E-06 190.26 By MS/MS 6.8 0.748 2 2 1 5 14169000 14169000 0 5199 2324 5392 12723;12724;12725;12726;12727 9080;9081;9082;9083 9081 4 163020 0 GHTFAEELQK LSSAIGFALELVTEKGHTFAEELQKIQCTL LVTEKGHTFAEELQKIQCTLQDVGSALATP K G H Q K I 1 0 0 0 0 1 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1158.5669 Q96EY8 Q96EY8 107 116 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes yes 2 0.00095555 124.92 By MS/MS 9 0 1 1 267670 267670 0 5200 2171 5393 12728 9084 9084 1 153620 0 GHVFEESQVAGTPMFVVK EQVVGGIYGVLNRKRGHVFEESQVAGTPMF FEESQVAGTPMFVVKAYLPVNESFGFTADL R G H V K A 1 0 0 0 0 1 2 2 1 0 0 1 1 2 1 1 1 0 0 4 0 0 18 0 1960.9717 P13639 P13639 768 785 EEF2 Elongation factor 2 yes yes 2;3 2.878E-25 217.19 By MS/MS 4.5 0.5 2 2 4 11181000 11181000 0 5201 576 5394 12729;12730;12731;12732 9085;9086 9086 364 2 311410 0 GHVQPIR MTKKRRNNGRAKKGRGHVQPIRCTNCARCV NGRAKKGRGHVQPIRCTNCARCVPKDKAIK R G H I R C 0 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 1 0 0 7 0 805.45587 P62854;Q5JNZ5 P62854 16 22 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2 0.037598 109.7 By MS/MS By matching 10 0 2 1 1 1635500 1592000 43520 5202 1151 5395 12733;12734 9087 9087 1 1692100 1116300 GHVTQDAPIPGSPLYTIK ADCVSAVYTVLARRRGHVTQDAPIPGSPLY TQDAPIPGSPLYTIKAFIPAIDSFGFETDL R G H I K A 1 0 0 1 0 1 0 2 1 2 1 1 0 0 3 1 2 0 1 1 0 0 18 0 1892.9996 Q15029 Q15029 855 872 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00090329 143.05 By MS/MS 4 0 1 1 607220 607220 0 5203 1466 5396 12735 9088 9088 1 16576 0 GHYNNVSCAVFHPR WRMNESKAWEVDTCRGHYNNVSCAVFHPRQ RGHYNNVSCAVFHPRQELILSNSEDKSIRV R G H P R Q 1 1 2 0 1 0 0 1 2 0 0 0 0 1 1 1 0 0 1 2 0 0 14 0 1656.7579 P53621 P53621 247 260 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.0081076 86.944 By MS/MS 1 0 1 1 411240 411240 0 5204 1005 5397 12736 9089 9089 1 20092 0 GHYTEGAELVDAVLDVVR NFVFGQSGAGNNWAKGHYTEGAELVDAVLD TEGAELVDAVLDVVRKEAESCDCLQGFQLT K G H V R K 2 1 0 2 0 0 2 2 1 0 2 0 0 0 0 0 1 0 1 4 0 0 18 0 1941.9796 P04350;Q9BUF5 P04350 104 121 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain no no 3 0.0028187 97.291 By MS/MS 6 0 1 1 1029500 1029500 0 5205 451;2363 5398 12737 9090 9090 1 8027.9 0 GHYTEGAELVDAVLDVVRK NFVFGQSGAGNNWAKGHYTEGAELVDAVLD EGAELVDAVLDVVRKEAESCDCLQGFQLTH K G H R K E 2 1 0 2 0 0 2 2 1 0 2 1 0 0 0 0 1 0 1 4 0 0 19 1 2070.0746 P04350;Q9BUF5 P04350 104 122 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain no no 3 2.748E-05 132.64 By MS/MS 6 0 1 1 1367700 1367700 0 5206 451;2363 5399 12738 9091 9091 1 10666 0 GHYTEGAELVDSVLDVVR NFVFGQSGAGNNWAKGHYTEGAELVDSVLD TEGAELVDSVLDVVRKEAESCDCLQGFQLT K G H V R K 1 1 0 2 0 0 2 2 1 0 2 0 0 0 0 1 1 0 1 4 0 0 18 0 1957.9745 P07437;P68371;Q13885;Q9BVA1;Q13509 P68371 104 121 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain no no 2;3 1.7391E-69 360.04 By MS/MS 5.82 0.716 1 1 8 1 11 224380000 224380000 0 5207 1187;490;1400;2375;1377 5400 12739;12740;12741;12742;12743;12744;12745;12746;12747;12748;12749 9092;9093;9094;9095;9096;9097;9098;9099;9100;9101;9102 9099 10 1755700 0 GHYTEGAELVDSVLDVVRK NFVFGQSGAGNNWAKGHYTEGAELVDSVLD EGAELVDSVLDVVRKEAESCDCLQGFQLTH K G H R K E 1 1 0 2 0 0 2 2 1 0 2 1 0 0 0 1 1 0 1 4 0 0 19 1 2086.0695 P07437;P68371;Q13885;Q9BVA1;Q13509 P68371 104 122 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain no no 2;3;4 1.5364E-134 374.2 By MS/MS 5.89 0.314 1 8 9 413210000 413210000 0 5208 1187;490;1400;2375;1377 5401 12750;12751;12752;12753;12754;12755;12756;12757;12758 9103;9104;9105;9106;9107;9108;9109;9110;9111;9112;9113;9114;9115 9110 12 3224900 0 GHYTIGK QLITGKEDAANNYARGHYTIGKEIIDLVLD DAANNYARGHYTIGKEIIDLVLDRIRKLAD R G H G K E 0 0 0 0 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 7 0 774.40244 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 106 112 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2 0.023342 119.56 By MS/MS By matching 7.43 1.5 3 1 1 1 1 6 1 219400000 219340000 51001 5209 1185;1754;2314;1186 5402 12759;12760;12761;12762;12763;12764;12765 9116;9117;9118 9118 3 2499900 156420 GHYTIGKEIIDLVLDR QLITGKEDAANNYARGHYTIGKEIIDLVLD HYTIGKEIIDLVLDRIRKLADQCTGLQGFL R G H D R I 0 1 0 2 0 0 1 2 1 3 2 1 0 0 0 0 1 0 1 1 0 0 16 1 1841.0047 P68363;Q71U36;Q9BQE3 P68363 106 121 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 2;3 1.3809E-06 163.62 By MS/MS 6 0 2 2 2260000 2260000 0 5210 1185;1754;2314 5403 12766;12767 9119;9120 9120 2 17624 0 GIAADGANALLPANR FKEGKYERAIECYTRGIAADGANALLPANR GIAADGANALLPANRAMAYLKIQKYEEAEK R G I N R A 5 1 2 1 0 0 0 2 0 1 2 0 0 0 1 0 0 0 0 0 0 0 15 0 1422.7579 Q9H6T3 Q9H6T3 308 322 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 5.6604E-07 158.3 By MS/MS 5 0 1 1 1472100 1472100 0 5211 2512 5404 12768 9121 9121 1 60510 0 GIALQLK G I L K 1 0 0 0 0 1 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 7 0 741.47487 REV__Q0VDD8 yes yes 2 0.019412 128 By MS/MS 6 0 1 1 1991000 1991000 0 + 5212 3028 5405 12769 9122 9122 1 15526 0 GIALWGGEK RWSPKGTYLATFHQRGIALWGGEKFKQIQR ATFHQRGIALWGGEKFKQIQRFSHQGVQLI R G I E K F 1 0 0 0 0 0 1 3 0 1 1 1 0 0 0 0 0 1 0 0 0 0 9 0 929.49707 P55884 P55884 356 364 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0015359 134.81 By MS/MS 4.5 0.5 1 1 2 5508500 5508500 0 5213 1040 5406 12770;12771 9123 9123 1 163710 0 GIAPIWISGENIPQEK TQIALEPEQILRYGRGIAPIWISGENIPQE IAPIWISGENIPQEKDIPDCPCGAKRILEF R G I E K D 1 0 1 0 0 1 2 2 0 4 0 1 0 0 2 1 0 1 0 0 0 0 16 0 1750.9254 Q16342 Q16342 261 276 PDCD2 Programmed cell death protein 2 yes yes 2 0.00341 126.34 By MS/MS 7 0 1 1 413140 413140 0 5214 1533 5407 12772 9124 9124 1 7382.8 0 GICDYFPSPSK FKAFSTREDAEKFARGICDYFPSPSKTSLP KFARGICDYFPSPSKTSLPLSPVKTAPLFS R G I S K T 0 0 0 1 1 0 0 1 0 1 0 1 0 1 2 2 0 0 1 0 0 0 11 0 1269.57 Q86XL3 Q86XL3 252 262 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.036728 80.24 By MS/MS 4 0.816 1 1 1 3 711720 711720 0 5215 1841 5408 12773;12774;12775 9125 9125 1 20171 0 GIDPFSLDALSK VCGDSDKGFVVINQKGIDPFSLDALSKEGI NQKGIDPFSLDALSKEGIVALRRAKRRNME K G I S K E 1 0 0 2 0 0 0 1 0 1 2 1 0 1 1 2 0 0 0 0 0 0 12 0 1261.6554 P40227 P40227 296 307 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.00025353 157.97 By MS/MS By MS/MS 5.94 2.24 1 1 1 2 5 4 1 1 1 16 1 323680000 323650000 30915 5216 828 5409 12776;12777;12778;12779;12780;12781;12782;12783;12784;12785;12786;12787;12788;12789;12790;12791;12792 9126;9127;9128;9129;9130;9131;9132;9133;9134;9135;9136 9132 11 3251000 94814 GIDPFSLDALSKEGIVALR VCGDSDKGFVVINQKGIDPFSLDALSKEGI FSLDALSKEGIVALRRAKRRNMERLTLACG K G I L R R 2 1 0 2 0 0 1 2 0 2 3 1 0 1 1 2 0 0 0 1 0 0 19 1 2000.0942 P40227 P40227 296 314 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 0.00092777 100.58 By MS/MS 6 0 2 2 15337000 15337000 0 5217 828 5410 12793;12794 9137;9138 9137 2 119600 0 GIDPFSLDALSKEGIVALRR VCGDSDKGFVVINQKGIDPFSLDALSKEGI SLDALSKEGIVALRRAKRRNMERLTLACGG K G I R R A 2 2 0 2 0 0 1 2 0 2 3 1 0 1 1 2 0 0 0 1 0 0 20 2 2156.1954 P40227 P40227 296 315 CCT6A T-complex protein 1 subunit zeta yes yes 3 0.012212 65.231 By MS/MS 6 0 1 1 3651600 3651600 0 5218 828 5411 12795 9139 9139 1 28475 0 GIDRYNPENLATLER AMFEQMRANVGKLLKGIDRYNPENLATLER GIDRYNPENLATLERYVETQAKENAYDLEA K G I E R Y 1 2 2 1 0 0 2 1 0 1 2 0 0 0 1 0 1 0 1 0 0 0 15 1 1759.8853 Q9UBQ5 Q9UBQ5 17 31 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2;3 3.0428E-06 182.72 By MS/MS 8.67 0.471 1 2 3 17717000 17717000 0 5219 2755 5412 12796;12797;12798 9140;9141 9141 2 10104000 0 GIDVQQVSLVINYDLPTNR SGSSRVLITTDLLARGIDVQQVSLVINYDL QQVSLVINYDLPTNRENYIHRIGRGGRFGR R G I N R E 0 1 2 2 0 2 0 1 0 2 2 0 0 0 1 1 1 0 1 3 0 0 19 0 2143.1273 P60842;Q14240 P60842 335 353 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 2.0384E-44 263.15 By MS/MS 4 2 1 1 2 8649800 8649800 0 5220 1074 5413 12799;12800 9142;9143 9143 2 71671 0 GIDVQQVSLVINYDLPTNRENYIHR SGSSRVLITTDLLARGIDVQQVSLVINYDL INYDLPTNRENYIHRIGRGGRFGRKGVAIN R G I H R I 0 2 3 2 0 2 1 1 1 3 2 0 0 0 1 1 1 0 2 3 0 0 25 1 2955.5203 P60842;Q14240 P60842 335 359 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 4 0.0096245 52.273 By MS/MS 6 0 1 1 2847100 2847100 0 5221 1074 5414 12801 9144 9144 1 22202 0 GIEDNPMVVPLCNR RKAVLVALKERGLFRGIEDNPMVVPLCNRS RGIEDNPMVVPLCNRSKDVVEPLLRPQWYV R G I N R S 0 1 2 1 1 0 1 1 0 1 1 0 1 0 2 0 0 0 0 2 0 0 14 0 1612.7701 P26640 P26640 652 665 VARS Valine--tRNA ligase yes yes 2 0.00023803 135.8 By MS/MS 3.75 0.829 2 1 1 4 1611000 1611000 0 5222 699 5415;5416 12802;12803;12804;12805 9145;9146 9145 468 2 44975 0 GIEILTDMSRPVELSDR HPTIISESFQKALEKGIEILTDMSRPVELS EILTDMSRPVELSDRETLLNSATTSLNSKV K G I D R E 0 2 0 2 0 0 2 1 0 2 2 0 1 0 1 2 1 0 0 1 0 0 17 1 1929.983 P50991 P50991 144 160 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0061649 134.18 By MS/MS 6.71 1.28 1 3 1 1 1 7 25505000 25505000 0 5223 956 5417;5418 12806;12807;12808;12809;12810;12811;12812 9147;9148;9149 9147 714 3 587730 0 GIEILTDMSRPVELSDRETLLNSATTSLNSK HPTIISESFQKALEKGIEILTDMSRPVELS RETLLNSATTSLNSKVVSQYSSLLSPMSVN K G I S K V 1 2 2 2 0 0 3 1 0 2 5 1 1 0 1 5 4 0 0 1 0 0 31 2 3389.7348 P50991 P50991 144 174 CCT4 T-complex protein 1 subunit delta yes yes 3;4 1.8793E-05 65.223 By MS/MS 6 0 2 2 29831000 29831000 0 5224 956 5419 12813;12814 9150;9151 9150 714 2 232630 0 GIELGDIQSSIESIK GSEAQSVKPSTRRKKGIELGDIQSSIESIK GIELGDIQSSIESIKQTQEEIKRNIMALRN K G I I K Q 0 0 0 1 0 1 2 2 0 4 1 1 0 0 0 3 0 0 0 0 0 0 15 0 1587.8356 Q9BZF1 Q9BZF1 824 838 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 2 6.5876E-15 211.38 By MS/MS 4 0 1 1 308870 308870 0 5225 2421 5420 12815 9152 9152 1 8431.7 0 GIFLGDQWR KKFWETDESSKDGPKGIFLGDQWRDSAWGT SKDGPKGIFLGDQWRDSAWGTSDHSVSQPI K G I W R D 0 1 0 1 0 1 0 2 0 1 1 0 0 1 0 0 0 1 0 0 0 0 9 0 1090.556 Q14671 Q14671 165 173 PUM1 Pumilio homolog 1 yes yes 2 0.0070861 111.17 By MS/MS 3 0 1 1 339430 339430 0 5226 1438 5421 12816 9153 9153 1 8860.9 0 GIFNGFSVTLK DLVKCRMQVDPQKYKGIFNGFSVTLKEDGV QKYKGIFNGFSVTLKEDGVRGLAKGWAPTF K G I L K E 0 0 1 0 0 0 0 2 0 1 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1181.6445 Q00325 Q00325 102 112 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.0021895 119.53 By MS/MS 1 0 1 1 63746 63746 0 5227 1230 5422 12817 9154 9154 1 3114.5 0 GIFTKEDALK KHSLDASQGTATGPRGIFTKEDALKLVQLK ATGPRGIFTKEDALKLVQLKQTGKITESRP R G I L K L 1 0 0 1 0 0 1 1 0 1 1 2 0 1 0 0 1 0 0 0 0 0 10 1 1120.6128 O00330 O00330 209 218 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 2 0.045416 103.7 By MS/MS 5.5 0.5 1 1 2 2866200 2866200 0 5228 89 5423 12818;12819 9155 9155 1 30820 0 GIFTSEIGTK LAKLYRSIGEYDVLRGIFTSEIGTKQITQS YDVLRGIFTSEIGTKQITQSALLAEARSDY R G I T K Q 0 0 0 0 0 0 1 2 0 2 0 1 0 1 0 1 2 0 0 0 0 0 10 0 1051.555 P78527 P78527 2941 2950 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00081113 131.62 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 9911600 9849600 62044 5229 1197 5424 12820;12821;12822;12823;12824 9156;9157;9158;9159 9159 4 426150 62044 GIFVFGNPQLSVIALGSR IKTARFLKSELENIKGIFVFGNPQLSVIAL VFGNPQLSVIALGSRDFDIYRLSNLMTAKG K G I S R D 1 1 1 0 0 1 0 3 0 2 2 0 0 2 1 2 0 0 0 2 0 0 18 0 1874.0414 O95470 O95470 439 456 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 6.6353E-07 145.52 By MS/MS 6 0 1 1 364970 364970 0 5230 395 5425 12825 9160 9160 1 2846.1 0 GIGDPLVSVYAR TGISECLPRLTCMIRGIGDPLVSVYARAYL MIRGIGDPLVSVYARAYLCRVGMEVAPHLK R G I A R A 1 1 0 1 0 0 0 2 0 1 1 0 0 0 1 1 0 0 1 2 0 0 12 0 1245.6717 Q7Z3J2 Q7Z3J2 325 336 C16orf62 UPF0505 protein C16orf62 yes yes 2 0.0053306 101.3 By MS/MS 4 0 1 1 0 0 0 5231 1784 5426 12826 9161 9161 1 0 0 GIGELVSEEPFVVK LCTCDRRKAQWYLDKGIGELVSEEPFVVKL KGIGELVSEEPFVVKLRFEPAGRPESPGDY K G I V K L 0 0 0 0 0 0 3 2 0 1 1 1 0 1 1 1 0 0 0 3 0 0 14 0 1501.8028 Q9NVH0 Q9NVH0 383 396 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 4.6876E-17 199.68 By MS/MS 5 0 1 1 0 0 0 5232 2651 5427 12827 9162 9162 1 0 0 GIGGIFFDDLDSPSK WCDDYFFIAHRGERRGIGGIFFDDLDSPSK GIGGIFFDDLDSPSKEEVFRFVQSCARAVV R G I S K E 0 0 0 3 0 0 0 3 0 2 1 1 0 2 1 2 0 0 0 0 0 0 15 0 1566.7566 P36551 P36551 333 347 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 0.040692 88.155 By MS/MS 7.5 0.5 1 1 2 88265 88265 0 5233 807 5428 12828;12829 9163 9163 1 3732.8 0 GIHDADAEAR SLERHAAVLVETIKKGIHDADAEARVEARK ETIKKGIHDADAEARVEARKTYMGLRNHFP K G I A R V 3 1 0 2 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 10 0 1053.4839 O75122 O75122 262 271 CLASP2 CLIP-associating protein 2 yes yes 2 0.042335 80.755 By MS/MS 3 0 1 1 136270 136270 0 5234 279 5429 12830 9164 9164 1 3557.5 0 GIHPTIISESFQK IAGSLLDSCTKLLQKGIHPTIISESFQKAL QKGIHPTIISESFQKALEKGIEILTDMSRP K G I Q K A 0 0 0 0 0 1 1 1 1 3 0 1 0 1 1 2 1 0 0 0 0 0 13 0 1455.7722 P50991 P50991 127 139 CCT4 T-complex protein 1 subunit delta yes yes 2;3 1.0048E-07 229.68 By MS/MS 7 2.07 1 1 1 3 2 2 2 2 14 553590000 553590000 0 5235 956 5430 12831;12832;12833;12834;12835;12836;12837;12838;12839;12840;12841;12842;12843;12844 9165;9166;9167;9168;9169;9170;9171;9172;9173;9174 9172 10 7778400 0 GIIDPTKVVR GYDAMAGDFVNMVEKGIIDPTKVVRTALLD NMVEKGIIDPTKVVRTALLDAAGVASLLTT K G I V R T 0 1 0 1 0 0 0 1 0 2 0 1 0 0 1 0 1 0 0 2 0 0 10 1 1096.6604 P10809 P10809 517 526 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0091516 119.75 By MS/MS By matching 6.25 0.433 3 1 3 1 41338000 41210000 128180 5236 544 5431 12845;12846;12847;12848 9175;9176 9176 2 329540 393110 GIILAGTEEQK SITVTLAAHQAIGLKGIILAGTEEQKAKYL IGLKGIILAGTEEQKAKYLPKLASGEHIAA K G I Q K A 1 0 0 0 0 1 2 2 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 0 1157.6292 Q9H845 Q9H845 152 162 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2 6.6511E-07 187.22 By MS/MS 6 0 1 1 0 0 0 5237 2521 5432 12849 9177 9177 1 0 0 GIILFISR LQLALNFTAHMAYRKGIILFISRNRQFSYL AHMAYRKGIILFISRNRQFSYLIENMARDC K G I S R N 0 1 0 0 0 0 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 8 0 917.56984 Q9Y399 Q9Y399 140 147 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.014636 113.7 By MS/MS 8 0 1 1 163560 163560 0 5238 2920 5433 12850 9178 9178 1 10790 0 GIISALLLPPETEEAK YPEKEEPKHILNIKRGIISALLLPPETEEA IISALLLPPETEEAKQVLFLDTVYGNCSTD R G I A K Q 2 0 0 0 0 0 3 1 0 2 3 1 0 0 2 1 1 0 0 0 0 0 16 0 1679.9346 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 156 171 yes yes 2 0.013524 85.813 By MS/MS 6 2 1 1 1 1 1 1 1 7 1462500 1462500 0 + 5239 31 5434 12851;12852;12853;12854;12855;12856;12857 9179;9180;9181;9182 9179 4 101140 0 GIKEEVQLTSK QIIELELKEEIKKKKGIKEEVQLTSKQKEM KKKKGIKEEVQLTSKQKEMLQAQLDREAQV K G I S K Q 0 0 0 0 0 1 2 1 0 1 1 2 0 0 0 1 1 0 0 1 0 0 11 1 1230.682 Q92616 Q92616 819 829 GCN1L1 Translational activator GCN1 yes yes 3 0.00022641 142.89 By MS/MS 2.5 0.5 1 1 2 772480 772480 0 5240 2068 5435 12858;12859 9183 9183 1 32937 0 GILAADESTGSIAK KELSDIAHRIVAPGKGILAADESTGSIAKR KGILAADESTGSIAKRLQSIGTENTEENRR K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 P04075 P04075 29 42 ALDOA Fructose-bisphosphate aldolase A yes yes 2 1.4646E-05 192.5 By MS/MS By matching 8.17 1.07 2 2 1 1 4 2 20438000 20370000 67551 5241 444 5436 12860;12861;12862;12863;12864;12865 9184;9185;9186;9187 9186 4 894990 413840 GILAADESTGSIAKR KELSDIAHRIVAPGKGILAADESTGSIAKR GILAADESTGSIAKRLQSIGTENTEENRRF K G I K R L 3 1 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 15 1 1487.7944 P04075 P04075 29 43 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.016231 122.7 By MS/MS 7 0 1 1 2048300 2048300 0 5242 444 5437 12866 9188 9188 1 36603 0 GILADEDSSR LPVDDTSFRWVESLKGILADEDSSRPVWLK VESLKGILADEDSSRPVWLKAINCATSGVV K G I S R P 1 1 0 2 0 0 1 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 10 0 1061.4989 P49327 P49327 1430 1439 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0092866 99.815 By MS/MS 2 0 1 1 222680 222680 0 5243 915 5438 12867 9189 9189 1 11068 0 GILDVQSVQEK LAEAAERRQKEAASRGILDVQSVQEKRKKK AASRGILDVQSVQEKRKKKEKIEKQIATSG R G I E K R 0 0 0 1 0 2 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1214.6507 Q8NHG7 Q8NHG7 40 50 SVIP Small VCP/p97-interacting protein yes yes 2 7.1298E-07 183.03 By MS/MS 10 0 1 1 168210 168210 0 5244 1974 5439 12868 9190 9190 1 178780 0 GILEGELEGIR VPRGRRAQSALAQLRGILEGELEGIRGAGT AQLRGILEGELEGIRGAGTWKSERVITSRQ R G I I R G 0 1 0 0 0 0 3 3 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1184.6401 O75600 O75600 29 39 GCAT 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes yes 2 0.00037682 147.75 By MS/MS 6.5 1.12 1 1 1 1 4 6162600 6162600 0 5245 318 5440 12869;12870;12871;12872 9191 9191 1 125100 0 GILEQGWQADSTTR DFAAFVGLPVEEAVKGILEQGWQADSTTRM KGILEQGWQADSTTRMVLPRKPVAGALDVS K G I T R M 1 1 0 1 0 2 1 2 0 1 1 0 0 0 0 1 2 1 0 0 0 0 14 0 1560.7532 Q99627 Q99627 147 160 COPS8 COP9 signalosome complex subunit 8 yes yes 2 5.6525E-12 198.97 By MS/MS 9 0 1 1 2130900 2130900 0 5246 2278 5441 12873 9192 9192 1 1223000 0 GILEVWSTQQGPR PSRVAQFLVIYAPRRGILEVWSTQQGPRVG RRGILEVWSTQQGPRVGAFNVGKHCRLLYP R G I P R V 0 1 0 0 0 2 1 2 0 1 1 0 0 0 1 1 1 1 0 1 0 0 13 0 1469.7627 Q9H2M9 Q9H2M9 473 485 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 8.2223E-18 225.22 By MS/MS 3.5 0.5 1 1 2 676250 676250 0 5247 2481 5442 12874;12875 9193 9193 1 17748 0 GILFVGSGVSGGEEGAR EYRDTTRRCRDLKAKGILFVGSGVSGGEEG LFVGSGVSGGEEGARYGPSLMPGGNKEAWP K G I A R Y 1 1 0 0 0 0 2 6 0 1 1 0 0 1 0 2 0 0 0 2 0 0 17 0 1590.8002 P52209 P52209 120 136 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 8.8228E-34 248.19 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 26735000 26709000 26529 5248 981 5443 12876;12877;12878;12879;12880;12881 9194;9195;9196;9197 9194 4 540980 81362 GILKKGDECELLGHSK SVPGRGTVVTGTLERGILKKGDECELLGHS ILKKGDECELLGHSKNIRTVVTGIEMFHKS R G I S K N 0 0 0 1 1 0 2 3 1 1 3 3 0 0 0 1 0 0 0 0 0 0 16 2 1782.9298 P49411 P49411 282 297 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.0040179 102.15 By MS/MS 6.5 0.5 1 1 2 6855100 6855100 0 5249 918 5444 12882;12883 9198 9198 1 118820 0 GILLFGPPGTGK IKFPHLFTGKRTPWRGILLFGPPGTGKSYL PWRGILLFGPPGTGKSYLAKAVATEANNST R G I G K S 0 0 0 0 0 0 0 4 0 1 2 1 0 1 2 0 1 0 0 0 0 0 12 0 1155.6652 Q9UN37;O75351;Q6PIW4 Q9UN37 162 173 VPS4A;VPS4B;FIGNL1 Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B;Fidgetin-like protein 1 yes no 2 0.0052129 105.1 By MS/MS 6.5 1.12 1 1 1 1 4 3570000 3570000 0 5250 2836 5445 12884;12885;12886;12887 9199;9200;9201 9201 3 41912 0 GILLVGPPGTGK KNPQKFTILGGKLPKGILLVGPPGTGKTLL LPKGILLVGPPGTGKTLLARAVAGEADVPF K G I G K T 0 0 0 0 0 0 0 4 0 1 2 1 0 0 2 0 1 0 0 1 0 0 12 0 1107.6652 Q96TA2 Q96TA2 374 385 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.015159 91.265 By MS/MS By matching 6.75 0.829 2 1 1 3 1 5342400 5314200 28216 5251 2263 5446 12888;12889;12890;12891 9202 9202 1 54630 86536 GILLYGPPGCGK FPPEIVEQMGCKHVKGILLYGPPGCGKTLL HVKGILLYGPPGCGKTLLARQIGKMLNARE K G I G K T 0 0 0 0 1 0 0 4 0 1 2 1 0 0 2 0 0 0 1 0 0 0 12 0 1230.6431 P46459 P46459 255 266 NSF Vesicle-fusing ATPase yes yes 2 0.013265 93.374 By MS/MS 5.5 0.5 1 1 2 7625200 7625200 0 5252 881 5447 12892;12893 9203 9203 1 281190 0 GINSSNVENQLQATQAAR NNQGTVNWSVDDIVKGINSSNVENQLQATQ SSNVENQLQATQAARKLLSREKQPPIDNII K G I A R K 3 1 3 0 0 3 1 1 0 1 1 0 0 0 0 2 1 0 0 1 0 0 18 0 1899.9399 P52292 P52292 84 101 KPNA2 Importin subunit alpha-1 yes yes 2;3 1.004E-43 290.38 By MS/MS By matching 7.43 1.5 3 1 1 1 1 6 1 58834000 58778000 56151 5253 983 5448 12894;12895;12896;12897;12898;12899;12900 9204;9205;9206;9207;9208 9204 5 1246500 172210 GINTLVTYDMVPEPK TYFNKPDIDAWELRKGINTLVTYDMVPEPK GINTLVTYDMVPEPKIIDAALRACRRLNDF K G I P K I 0 0 1 1 0 0 1 1 0 1 1 1 1 0 2 0 2 0 1 2 0 0 15 0 1675.8491 P20674 P20674 73 87 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 6.8453E-21 225.79 By MS/MS 10 0 1 1 1587900 1587900 0 5254 644 5449 12901 9209 9209 435 1 1687800 0 GIPDLYDDAAIFEAK TVAFKDIKLWRKLLKGIPDLYDDAAIFEAK GIPDLYDDAAIFEAKKSFYWARKTSHSFVV K G I A K K 3 0 0 3 0 0 1 1 0 2 1 1 0 1 1 0 0 0 1 0 0 0 15 0 1636.7985 Q14534 Q14534 437 451 SQLE Squalene monooxygenase yes yes 2 0.00037347 145.29 By MS/MS 6 0 1 1 2492900 2492900 0 5255 1434 5450 12902 9210 9210 1 19439 0 GIPELEQYDPPELADSSGR YMYSAQGNGGGPPRKGIPELEQYDPPELAD LEQYDPPELADSSGRVVREKWSADMWRLGC K G I G R V 1 1 0 2 0 1 3 2 0 1 2 0 0 0 3 2 0 0 1 0 0 0 19 0 2071.9698 Q96KG9 Q96KG9 177 195 SCYL1 N-terminal kinase-like protein yes yes 2 6.9652E-08 154.13 By MS/MS 4 0 1 1 729280 729280 0 5256 2220 5451 12903 9211 9211 1 19909 0 GIPLATGDTSPEPELLPGAPLPPPK EEGEDDKCVTSELLKGIPLATGDTSPEPEL PEPELLPGAPLPPPKEVINGNIKTVTEYKI K G I P K E 2 0 0 1 0 0 2 3 0 1 4 1 0 0 8 1 2 0 0 0 0 0 25 0 2463.3261 O75821 O75821 33 57 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 1.7544E-11 141.34 By MS/MS 7 0 2 2 1318100 1318100 0 5257 330 5452 12904;12905 9212;9213 9212 2 23554 0 GIPNMLLSEEETES TLQCPESGRMFPISRGIPNMLLSEEETES_ RGIPNMLLSEEETES_______________ R G I E S - 0 0 1 0 0 0 4 1 0 1 2 0 1 0 1 2 1 0 0 0 0 0 14 0 1547.7025 Q9UI30 Q9UI30 112 125 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 0.00062062 125.22 By MS/MS 10 0 2 2 3098200 3098200 0 5258 2788 5453;5454 12906;12907 9214;9215 9214 1625 2 3293000 0 GIQEAQVELQK ENSRLLENMTEVVRKGIQEAQVELQKASEE VVRKGIQEAQVELQKASEERLLEEGVLRQI K G I Q K A 1 0 0 0 0 3 2 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 11 0 1241.6616 Q6P996 Q6P996 616 626 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 0.0077661 106.62 By MS/MS 4.5 0.5 1 1 2 1355800 1355800 0 5259 1712 5455 12908;12909 9216 9216 1 47543 0 GIQNQAEPR EAQGELQHASAVLQRGIQNQAEPREFLQQQ SAVLQRGIQNQAEPREFLQQQYRLFQTRLT R G I P R E 1 1 1 0 0 2 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 0 1011.5098 O43683 O43683 125 133 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.0078872 107.15 By MS/MS 2 0.816 1 1 1 3 545970 545970 0 5260 215 5456 12910;12911;12912 9217 9217 1 18445 0 GIRPAINVGLSVSR ITDGQIFLETELFYKGIRPAINVGLSVSRV KGIRPAINVGLSVSRVGSAAQTRAMKQVAG K G I S R V 1 2 1 0 0 0 0 2 0 2 1 0 0 0 1 2 0 0 0 2 0 0 14 1 1437.8416 P25705 P25705 403 416 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.0014372 128.88 By MS/MS 6 0 2 2 36339000 36339000 0 5261 687 5457 12913;12914 9218;9219 9219 2 283380 0 GISDLAQHYLMR EDIIQLKPDVVITEKGISDLAQHYLMRANI TEKGISDLAQHYLMRANITAIRRVRKTDNN K G I M R A 1 1 0 1 0 1 0 1 1 1 2 0 1 0 0 1 0 0 1 0 0 0 12 0 1402.7027 P49368 P49368 295 306 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 8.0475E-11 197.79 By MS/MS 6 0.707 2 4 2 8 136570000 136570000 0 5262 916 5458;5459 12915;12916;12917;12918;12919;12920;12921;12922 9220;9221;9222;9223 9222 669 4 1106700 0 GISDPLTVFEQTEAAAR DAGACIYFYFAFNYRGISDPLTVFEQTEAA SDPLTVFEQTEAAAREEILANGGSLSHHHG R G I A R E 3 1 0 1 0 1 2 1 0 1 1 0 0 1 1 1 2 0 0 1 0 0 17 0 1803.9003 O00116 O00116 587 603 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 6.3914E-07 166.86 By MS/MS 6 0.816 1 1 1 3 1504700 1504700 0 5263 67 5460 12923;12924;12925 9224 9224 1 48144 0 GISEETTTGVHNLYK NLIHTKYPQLLPGIRGISEETTTGVHNLYK GISEETTTGVHNLYKMMANGILKVPAINVN R G I Y K M 0 0 1 0 0 0 2 2 1 1 1 1 0 0 0 1 3 0 1 1 0 0 15 0 1647.8104 P23526 P23526 152 166 AHCY Adenosylhomocysteinase yes yes 2 4.3061E-06 199.8 By MS/MS 7.5 0.5 1 1 2 5116500 5116500 0 5264 670 5461 12926;12927 9225 9225 1 103140 0 GISHVIVDEIHER CTVGVLLRKLEAGIRGISHVIVDEIHERDI IRGISHVIVDEIHERDINTDFLLVVLRDVV R G I E R D 0 1 0 1 0 0 2 1 2 3 0 0 0 0 0 1 0 0 0 2 0 0 13 0 1502.7841 Q08211 Q08211 504 516 DHX9 ATP-dependent RNA helicase A yes yes 2;3 2.9132E-05 166.14 By MS/MS 3.5 0.5 2 2 4 4355400 4355400 0 5265 1287 5462 12928;12929;12930;12931 9226;9227 9227 2 114540 0 GISPVPINLR QEIEAETDRVTGTNKGISPVPINLRVYSPH TGTNKGISPVPINLRVYSPHVLNLTLIDLP K G I L R V 0 1 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 1 0 0 10 0 1064.6342 P50570;Q05193 P50570 114 123 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 2 0.021497 91.318 By MS/MS 4 0 1 1 782070 782070 0 5266 949 5463 12932 9228 9228 1 21350 0 GISVHISNAEPK DQIAQSLCGEDLIIKGISVHISNAEPKHNS IIKGISVHISNAEPKHNSNRQLERSGRFGG K G I P K H 1 0 1 0 0 0 1 1 1 2 0 1 0 0 1 2 0 0 0 1 0 0 12 0 1250.6619 Q13148 Q13148 252 263 TARDBP TAR DNA-binding protein 43 yes yes 2 0.022734 82.831 By MS/MS 7 0 1 1 1214000 1214000 0 5267 1340 5464 12933 9229 9229 1 21694 0 GISVNAEQVR CKNSHCAQTVSSVFKGISVNAEQVRIELEP SSVFKGISVNAEQVRIELEPPDKAKPLGTV K G I V R I 1 1 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 10 0 1071.5673 Q9H583 Q9H583 1153 1162 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.00075438 134.25 By MS/MS By matching 1.5 0.5 1 1 1 1 632500 606180 26322 5268 2503 5465 12934;12935 9230 9230 1 30130 26322 GITGVDLFGTTDAVVK RKKNLSPGAVESDVRGITGVDLFGTTDAVV ITGVDLFGTTDAVVKHVLEGHDRGVNWAAF R G I V K H 1 0 0 2 0 0 0 3 0 1 1 1 0 1 0 0 3 0 0 3 0 0 16 0 1591.8457 P53621 P53621 183 198 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 1.5527E-63 301.16 By MS/MS 2.25 0.829 1 1 2 4 2530800 2530800 0 5269 1005 5466 12936;12937;12938;12939 9231;9232;9233 9233 3 76750 0 GITINAAHVEYSTAAR KKYEEIDNAPEERARGITINAAHVEYSTAA ITINAAHVEYSTAARHYAHTDCPGHADYVK R G I A R H 4 1 1 0 0 0 1 1 1 2 0 0 0 0 0 1 2 0 1 1 0 0 16 0 1672.8533 P49411 P49411 105 120 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 1.1569E-38 259.27 By MS/MS 7.9 1.45 2 3 1 2 2 10 64749000 64749000 0 5270 918 5467 12940;12941;12942;12943;12944;12945;12946;12947;12948;12949 9234;9235;9236;9237;9238;9239;9240 9236 7 3228600 0 GITNLGYK NAWERRAPLAPKHIKGITNLGYKVLIQPSN LAPKHIKGITNLGYKVLIQPSNRRAIHDKD K G I Y K V 0 0 1 0 0 0 0 2 0 1 1 1 0 0 0 0 1 0 1 0 0 0 8 0 864.47052 Q9UDR5 Q9UDR5 49 56 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.018685 108.46 By MS/MS 4.5 0.5 1 1 2 1159900 1159900 0 5271 2762 5468 12950;12951 9241 9241 1 33291 0 GITSFLVDR LFLVMANVDPTIGYKGITSFLVDRDTPGLH PTIGYKGITSFLVDRDTPGLHIGKPENKLG K G I D R D 0 1 0 1 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 9 0 1006.5447 P45954 P45954 231 239 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0051036 115.49 By MS/MS 7 0 1 1 2210100 2210100 0 5272 871 5469 12952 9242 9242 1 39496 0 GIVDLIEER AAFMQIPMGLEGNFKGIVDLIEERAIYFDG LEGNFKGIVDLIEERAIYFDGDFGQIVRYG K G I E R A 0 1 0 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1042.5659 Q96RP9 Q96RP9 213 221 GFM1 Elongation factor G, mitochondrial yes yes 2 2.8382E-06 185.55 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 26959000 26959000 0 5273 2247 5470 12953;12954;12955;12956;12957;12958;12959;12960;12961 9243;9244;9245;9246;9247;9248;9249;9250 9246 8 1016100 0 GIVDQSQQAYQEAFEISK YYRYLAEVAAGDDKKGIVDQSQQAYQEAFE DQSQQAYQEAFEISKKEMQPTHPIRLGLAL K G I S K K 2 0 0 1 0 4 2 1 0 2 0 1 0 1 0 2 0 0 1 1 0 0 18 0 2039.98 P63104 P63104 140 157 YWHAZ 14-3-3 protein zeta/delta yes yes 2 6.8058E-83 311 By MS/MS 8 0 1 1 953500 953500 0 5274 1169 5471 12962 9251 9251 1 62902 0 GIVDSITGQR TENLEKISITEGIERGIVDSITGQRLLEAQ EGIERGIVDSITGQRLLEAQACTGGIIHPT R G I Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 1 1 0 0 1 0 0 10 0 1044.5564 P15924 P15924 2640 2649 DSP Desmoplakin yes yes 2 0.0011327 159.58 By MS/MS 2 0 1 1 0 0 0 5275 603 5472 12963 9252 9252 1 0 0 GIVFEDVKVPK GRKELNMGQRCSDTRGIVFEDVKVPKENVL SDTRGIVFEDVKVPKENVLIGDGAGFKVAM R G I P K E 0 0 0 1 0 0 1 1 0 1 0 2 0 1 1 0 0 0 0 3 0 0 11 1 1229.702 P11310 P11310 249 259 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.024394 114.86 By MS/MS 7 0 1 1 11138000 11138000 0 5276 552 5473 12964 9253 9253 1 199040 0 GIVNAVKDPDANGK WKTVKQPVYVVDVSKGIVNAVKDPDANGKS KGIVNAVKDPDANGKSFAFVGPSRYLLFHL K G I G K S 2 0 2 2 0 0 0 2 0 1 0 2 0 0 1 0 0 0 0 2 0 0 14 1 1396.731 Q16795 Q16795 248 261 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 3 0.01796 73.881 By MS/MS 8 0 1 1 981990 981990 0 5277 1548 5474 12965 9254 9254 1 64782 0 GIVVYTGDR NIAFFSTNCVEGTARGIVVYTGDRTVMGRI VEGTARGIVVYTGDRTVMGRIATLASGLEG R G I D R T 0 1 0 1 0 0 0 2 0 1 0 0 0 0 0 0 1 0 1 2 0 0 9 0 978.51345 P05023 P05023 256 264 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0011891 138.54 By MS/MS 4 2 1 1 1 1 1 1 1 7 24246000 24246000 0 5278 463 5475 12966;12967;12968;12969;12970;12971;12972 9255;9256;9257;9258;9259 9258 5 816030 0 GIYAYGFEK VDSFDDMNLSESLLRGIYAYGFEKPSAIQQ SESLLRGIYAYGFEKPSAIQQRAILPCIKG R G I E K P 1 0 0 0 0 0 1 2 0 1 0 1 0 1 0 0 0 0 2 0 0 0 9 0 1046.5073 P60842;Q14240;P38919 P60842 46 54 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 0.011689 101.43 By MS/MS 7 1.41 1 1 1 1 1 5 21005000 21005000 0 5279 1074;821 5476 12973;12974;12975;12976;12977 9260;9261 9261 2 322850 0 GIYAYGFEKPSAIQQR VDSFDDMNLSESLLRGIYAYGFEKPSAIQQ IYAYGFEKPSAIQQRAILPCIKGYDVIAQA R G I Q R A 2 1 0 0 0 2 1 2 0 2 0 1 0 1 1 1 0 0 2 0 0 0 16 1 1826.9315 P60842;Q14240;P38919 P60842 46 61 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2;3 1.7262E-09 187.62 By MS/MS 5.33 2.62 2 2 2 2 2 4 2 2 2 1 21 2603900000 2603900000 0 5280 1074;821 5477 12978;12979;12980;12981;12982;12983;12984;12985;12986;12987;12988;12989;12990;12991;12992;12993;12994;12995;12996;12997;12998 9262;9263;9264;9265;9266;9267;9268;9269;9270;9271;9272;9273;9274;9275;9276;9277;9278 9265 17 25841000 0 GIYFADMVSK IAPPEAPVTGYMFGKGIYFADMVSKSANYC YMFGKGIYFADMVSKSANYCHTSQGDPIGL K G I S K S 1 0 0 1 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 1 0 0 10 0 1129.5478 P09874 P09874 894 903 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0016917 115.71 By MS/MS By matching 4.25 0.433 3 1 3 1 5611300 5549700 61664 5281 521 5478;5479 12999;13000;13001;13002 9279;9280 9279 313 2 152880 128850 GIYLWDVEGR AHNYHPLPVALERGKGIYLWDVEGRKYFDF LERGKGIYLWDVEGRKYFDFLSSYSAVNQG K G I G R K 0 1 0 1 0 0 1 2 0 1 1 0 0 0 0 0 0 1 1 1 0 0 10 0 1206.6033 P04181 P04181 67 76 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.00089607 127.68 By MS/MS 6.5 0.5 1 1 2 820070 820070 0 5282 447 5480 13003;13004 9281 9281 1 11136 0 GIYTGLSAGLLR SFHALTSILKAEGLRGIYTGLSAGLLRQAT GLRGIYTGLSAGLLRQATYTTTRLGIYTVL R G I L R Q 1 1 0 0 0 0 0 3 0 1 3 0 0 0 0 1 1 0 1 0 0 0 12 0 1219.6925 Q02978 Q02978 79 90 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.00027968 148.91 By MS/MS 8 0 1 1 6212500 6212500 0 5283 1260 5481 13005 9282;9283 9282 2 409830 0 GKATISNDGATILK TLGPRGMDKLIVDGRGKATISNDGATILKL RGKATISNDGATILKLLDVVHPAAKTLVDI R G K L K L 2 0 1 1 0 0 0 2 0 2 1 2 0 0 0 1 2 0 0 0 0 0 14 1 1387.7671 Q99832 Q99832 54 67 CCT7 T-complex protein 1 subunit eta yes yes 2;3 4.2985E-11 198.52 By MS/MS By matching 6.71 1.28 1 3 1 1 1 6 1 122440000 122420000 19756 5284 2295 5482 13006;13007;13008;13009;13010;13011;13012 9284;9285 9284 2 1107000 60590 GKDCAVIVTQK FKAINQGGLTSVAVRGKDCAVIVTQKKVPD VAVRGKDCAVIVTQKKVPDKLLDSSTVTHL R G K Q K K 1 0 0 1 1 1 0 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 11 1 1217.6438 P60900 P60900 44 54 PSMA6 Proteasome subunit alpha type-6 yes yes 2;3 0.033109 123.67 By MS/MS 8.75 0.829 2 1 1 4 1933600 1933600 0 5285 1077 5483 13013;13014;13015;13016 9286;9287 9286 2 226950 0 GKDGVGAVMDSMELER VLYYTGRIAKMHEVKGKDGVGAVMDSMELE KDGVGAVMDSMELERQRGITIQSAATYTMW K G K E R Q 1 1 0 2 0 0 2 3 0 0 1 1 2 0 0 1 0 0 0 2 0 0 16 1 1692.7811 Q96RP9 Q96RP9 81 96 GFM1 Elongation factor G, mitochondrial yes yes 3 0.0048428 91.932 By MS/MS 5 0 1 1 501460 501460 0 5286 2247 5484 13017 9288 9288 1 20612 0 GKDHVVSDFSEHGSLK PVGLEGLLTTKWLLRGKDHVVSDFSEHGSL KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ R G K L K Y 0 0 0 2 0 0 1 2 2 0 1 2 0 1 0 3 0 0 0 2 0 0 16 1 1740.8431 P54886 P54886 766 781 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3;4 6.2911E-05 141.46 By MS/MS 5.5 0.5 3 3 6 26919000 26919000 0 5287 1019 5485 13018;13019;13020;13021;13022;13023 9289;9290;9291 9290 3 740790 0 GKDYYQTLGLAR ______________________________ ______________________________ M G K A R G 1 1 0 1 0 1 0 2 0 0 2 1 0 0 0 0 1 0 2 0 0 0 12 1 1383.7147 P25685 P25685 2 13 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 4.2488E-06 178.53 By MS/MS By matching 6.5 0.5 1 1 1 1 1249400 1233800 15636 5288 686 5486 13024;13025 9292 9292 1 22048 47954 GKEDEGEEAASPMLQIQR IPLDEGEDEAQRRRKGKEDEGEEAASPMLQ DEGEEAASPMLQIQRDAATIMQPYFTSNGL K G K Q R D 2 1 0 1 0 2 4 2 0 1 1 1 1 0 1 1 0 0 0 0 0 0 18 1 1986.9317 Q14204 Q14204 2400 2417 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.00718 78.166 By MS/MS 1.5 0.5 1 1 2 614150 614150 0 5289 1421 5487 13026;13027 9293 9293 1 30093 0 GKELNEFR IQKIIETLTQQLQAKGKELNEFREKHNIRL TQQLQAKGKELNEFREKHNIRLMGEDEKPA K G K F R E 0 1 1 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 1 991.50869 Q9UHV9 Q9UHV9 112 119 PFDN2 Prefoldin subunit 2 yes yes 2;3 0.019589 136.27 By MS/MS 9.67 0.471 1 2 3 497940 497940 0 5290 2783 5488 13028;13029;13030 9294;9295 9295 2 503180 0 GKEPYSSSK ARKSNFSLEDFQHSKGKEPYSSSKYATDLL DFQHSKGKEPYSSSKYATDLLSVALNRNFN K G K S K Y 0 0 0 0 0 0 1 1 0 0 0 2 0 0 1 3 0 0 1 0 0 0 9 1 981.47673 P56937 P56937 189 197 HSD17B7 3-keto-steroid reductase yes yes 2 0.043915 113.66 By MS/MS 8 0 1 1 178450 178450 0 5291 1050 5489 13031 9296 9296 1 11772 0 GKEVDNFVDKLK ARPSGPSKALKLGAKGKEVDNFVDKLKSEG GAKGKEVDNFVDKLKSEGETIMSSSMGKRT K G K L K S 0 0 1 2 0 0 1 1 0 0 1 3 0 1 0 0 0 0 0 2 0 0 12 2 1390.7456 P48444 P48444 232 243 ARCN1 Coatomer subunit delta yes yes 2;3 1.194E-06 191.33 By MS/MS 6 0 2 2 10884000 10884000 0 5292 903 5490 13032;13033 9297;9298 9298 2 84875 0 GKFNTSDVSAIEK GLLFEGRITPELLTRGKFNTSDVSAIEKNK TRGKFNTSDVSAIEKNKEGLHNAKEILTRL R G K E K N 1 0 1 1 0 0 1 1 0 1 0 2 0 1 0 2 1 0 0 1 0 0 13 1 1394.7042 P19367 P19367 332 344 HK1 Hexokinase-1 yes yes 2;3 0.00018566 196.15 By MS/MS 4.33 0.471 2 1 3 2987700 2987700 0 5293 630 5491 13034;13035;13036 9299;9300 9299 2 85602 0 GKGDKAQIEK VGEVIVTKDDAMLLKGKGDKAQIEKRIQEI AMLLKGKGDKAQIEKRIQEIIEQLDVTTSE K G K E K R 1 0 0 1 0 1 1 2 0 1 0 3 0 0 0 0 0 0 0 0 0 0 10 2 1072.5877 P10809 P10809 360 369 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.0013141 136.52 By MS/MS By matching 6.2 0.4 4 1 3 2 28623000 28528000 94649 5294 544 5492 13037;13038;13039;13040;13041 9301;9302 9302 2 224750 290280 GKGGEIQPVSVK KVLQATVVAVGSGSKGKGGEIQPVSVKVGD GSKGKGGEIQPVSVKVGDKVLLPEYGGTKV K G K V K V 0 0 0 0 0 1 1 3 0 1 0 2 0 0 1 1 0 0 0 2 0 0 12 1 1197.6717 P61604 P61604 55 66 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.041437 124.6 By MS/MS By matching 10 0 2 1 1 356610 339610 16998 5295 1102 5493 13042;13043 9303 9303 1 360970 435990 GKIEEAVNAFK TIKAELDAAEKLRKRGKIEEAVNAFKELVR LRKRGKIEEAVNAFKELVRKYPQSPRARYG R G K F K E 2 0 1 0 0 0 2 1 0 1 0 2 0 1 0 0 0 0 0 1 0 0 11 1 1204.6452 Q12797 Q12797 355 365 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.026882 113.44 By MS/MS 4 0 1 1 1382800 1382800 0 5296 1307 5494 13044 9304 9304 1 37750 0 GKIGLDFCK LLVATPGRLVDMMERGKIGLDFCKYLVLDE VDMMERGKIGLDFCKYLVLDEADRMLDMGF R G K C K Y 0 0 0 1 1 0 0 2 0 1 1 2 0 1 0 0 0 0 0 0 0 0 9 1 1036.5376 O00571;O15523 O00571 334 342 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.044038 113.62 By MS/MS By matching 5.33 0.471 2 1 2 1 3718000 3703700 14330 5297 105 5495 13045;13046;13047 9305 9305 1 134820 42401 GKLDGNQDLIR PIASIFAWTRGLEHRGKLDGNQDLIRFAQM LEHRGKLDGNQDLIRFAQMLEKVCVETVES R G K I R F 0 1 1 2 0 1 0 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 11 1 1227.6571 P48735 P48735 383 393 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2;3 0.018045 110.84 By MS/MS 7 0 2 2 4954600 4954600 0 5298 912 5496 13048;13049 9306;9307 9307 2 88539 0 GKLPIVNEDDELVAIIAR ITLKEANEILQRSKKGKLPIVNEDDELVAI PIVNEDDELVAIIARTDLKKNRDYPLASKD K G K A R T 2 1 1 2 0 0 2 1 0 3 2 1 0 0 1 0 0 0 0 2 0 0 18 1 1964.0942 P12268 P12268 207 224 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2;3 7.8943E-10 164.66 By MS/MS 6 0 2 2 5569600 5569600 0 5299 564 5497 13050;13051 9308;9309 9309 2 43432 0 GKPLPEYHVR FLRNELEIPGQYDGRGKPLPEYHVRIAGFD QYDGRGKPLPEYHVRIAGFDERVTVMASLR R G K V R I 0 1 0 0 0 0 1 1 1 0 1 1 0 0 2 0 0 0 1 1 0 0 10 1 1194.6509 P78527 P78527 3709 3718 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.013419 85.807 By MS/MS 1.5 0.5 1 1 2 833460 833460 0 5300 1197 5498 13052;13053 9310 9310 1 40815 0 GKVEEVELPVEK IVKANKLDHVVTIIKGKVEEVELPVEKVDI IIKGKVEEVELPVEKVDIIISEWMGYCLFY K G K E K V 0 0 0 0 0 0 4 1 0 0 1 2 0 0 1 0 0 0 0 3 0 0 12 1 1354.7344 Q99873;Q9NR22 Q99873 144 155 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 2 2.0384E-05 176.32 By MS/MS 7 0 1 1 982870 982870 0 5301 2296 5499 13054 9311 9311 1 17564 0 GKVEIDQQQLTQQQLNGN DERDEEDEERESKSRGKVEIDQQQLTQQQL EIDQQQLTQQQLNGN_______________ R G K G N - 0 0 2 1 0 6 1 2 0 1 2 1 0 0 0 0 1 0 0 1 0 0 18 1 2040.0236 Q8IWS0 Q8IWS0 348 365 PHF6 PHD finger protein 6 yes yes 2 5.6031E-18 205.87 By MS/MS 7 0 1 1 574320 574320 0 5302 1866 5500 13055 9312 9312 1 10263 0 GKVLDAIIQEK KVEEAKSSLAMNRSRGKVLDAIIQEKKSGR NRSRGKVLDAIIQEKKSGRIPGIYGRLGDL R G K E K K 1 0 0 1 0 1 1 1 0 2 1 2 0 0 0 0 0 0 0 1 0 0 11 1 1212.7078 Q9NTJ3 Q9NTJ3 597 607 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.003234 145.28 By MS/MS 3 0 1 1 905750 905750 0 5303 2630 5501 13056 9313 9313 1 23645 0 GKYDCGHVQK GRTQDLPGVKLTVVRGKYDCGHVQKK____ LTVVRGKYDCGHVQKK______________ R G K Q K K 0 0 0 1 1 1 0 2 1 0 0 2 0 0 0 0 0 0 1 1 0 0 10 1 1190.5502 O15235 O15235 128 137 MRPS12 28S ribosomal protein S12, mitochondrial yes yes 3 0.0099406 97.597 By MS/MS 10 0 1 1 0 0 0 5304 161 5502 13057 9314 9314 1 0 0 GKYKEETIEK ILERKAKSRQVGKEKGKYKEETIEKMQE__ VGKEKGKYKEETIEKMQE____________ K G K E K M 0 0 0 0 0 0 3 1 0 1 0 3 0 0 0 0 1 0 1 0 0 0 10 2 1223.6398 P61254 P61254 133 142 RPL26 60S ribosomal protein L26 yes yes 2 0.0082856 122.94 By MS/MS 9 0 1 1 123950 123950 0 5305 1095 5503 13058 9315 9315 1 71137 0 GLAAGSAETLPANFR RAPSWRKKFRPKDIRGLAAGSAETLPANFR GLAAGSAETLPANFRVTSSMSSPSMQPKKM R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 6.5039E-10 223.87 By MS/MS 3 0 1 1 1107900 1107900 0 5306 1338 5504 13059 9316 9316 1 28923 0 GLAGAVSELLR EDEGGSGRPLLQAAKGLAGAVSELLRSAQP QAAKGLAGAVSELLRSAQPASAEPRQNLLQ K G L L R S 2 1 0 0 0 0 1 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1084.6241 Q9Y490 Q9Y490 614 624 TLN1 Talin-1 yes yes 2 0.0017315 123.86 By MS/MS 2.5 0.5 1 1 2 196780 196780 0 5307 2947 5505 13060;13061 9317 9317 1 6955.9 0 GLAITFVSDENDAK TYLHRVARAGRFGTKGLAITFVSDENDAKI KGLAITFVSDENDAKILNDVQDRFEVNVAE K G L A K I 2 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1478.7253 O00148;Q13838 O00148 384 397 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 3.1938E-17 203.51 By MS/MS By MS/MS 7.5 1.5 1 1 1 1 32490 0 32490 5308 70 5506 13062;13063 9318;9319 9319 2 0 99645 GLALALFGGEPK ASIAPSIYGHEDIKRGLALALFGGEPKNPG IKRGLALALFGGEPKNPGGKHKVRGDINVL R G L P K N 2 0 0 0 0 0 1 3 0 0 3 1 0 1 1 0 0 0 0 0 0 0 12 0 1171.6601 P49736 P49736 494 505 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00024909 150.35 By MS/MS 3.25 1.48 1 1 1 1 4 2298400 2298400 0 5309 928 5507 13064;13065;13066;13067 9320;9321;9322;9323;9324 9321 5 64779 0 GLAPEQPVTLR AGRCCWDEPVRIAVRGLAPEQPVTLRASLR IAVRGLAPEQPVTLRASLRDEKGALFQAHA R G L L R A 1 1 0 0 0 1 1 1 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1179.6612 Q86TX2;P49753 Q86TX2 25 35 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 2 0.026092 83.862 By MS/MS 7 0 1 1 3863700 3863700 0 5310 1817 5508 13068 9325 9325 1 69045 0 GLASTLLR VHQSYRAEGWRVFTRGLASTLLRAFPVNAA GWRVFTRGLASTLLRAFPVNAATFATVTVV R G L L R A 1 1 0 0 0 0 0 1 0 0 3 0 0 0 0 1 1 0 0 0 0 0 8 0 829.50215 Q8N8R3 Q8N8R3 250 257 SLC25A29 Mitochondrial basic amino acids transporter yes yes 2 0.012171 116.88 By MS/MS 8 0 1 1 938700 938700 0 5311 1934 5509 13069 9326 9326 1 61926 0 GLATFCLDK PEGPYGVFAGRDASRGLATFCLDKEALKDE GRDASRGLATFCLDKEALKDEYDDLSDLTA R G L D K E 1 0 0 1 1 0 0 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 9 0 1023.5059 O15173;O00264 O00264 124 132 PGRMC2;PGRMC1 Membrane-associated progesterone receptor component 2;Membrane-associated progesterone receptor component 1 no no 2 0.0007076 132.76 By MS/MS 9 0.816 1 1 1 3 4682600 4682600 0 5312 85;157 5510 13070;13071;13072 9327 9327 1 2579200 0 GLCAIAQAESLR PEGSVELYAEKVATRGLCAIAQAESLRYKL ATRGLCAIAQAESLRYKLLGGLAVRRACYG R G L L R Y 3 1 0 0 1 1 1 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1287.6605 P23396 P23396 95 106 RPS3 40S ribosomal protein S3 yes yes 2 3.461E-07 185.33 By MS/MS By matching 8 0 2 1 1 19632000 19535000 97052 5313 668 5511 13073;13074 9328 9328 1 1288700 827970 GLCESVVEADLVEALEK GSHHKVSVSPVVHVRGLCESVVEADLVEAL CESVVEADLVEALEKFGTICYVMMMPFKRQ R G L E K F 2 0 0 1 1 0 4 1 0 0 3 1 0 0 0 1 0 0 0 3 0 0 17 0 1859.9186 Q8WVV9 Q8WVV9 82 98 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 2 2.4447E-10 198.14 By MS/MS 6 0 1 1 370710 370710 0 5314 2035 5512 13075 9329 9329 1 2890.8 0 GLCGAIHSSIAK EDKKKHLLIGVSSDRGLCGAIHSSIAKQMK SDRGLCGAIHSSIAKQMKSEVATLTAAGKE R G L A K Q 2 0 0 0 1 0 0 2 1 2 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1212.6285 P36542 P36542 101 112 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2;3 0.0037499 112.36 By MS/MS By matching 8.6 0.8 3 1 1 4 1 26051000 26027000 24536 5315 805 5513 13076;13077;13078;13079;13080 9330;9331 9330 2 1821000 209320 GLDFALLQK SKFLGGDMEHTHLVKGLDFALLQKVRAEIA HTHLVKGLDFALLQKVRAEIASKEKEEEEL K G L Q K V 1 0 0 1 0 1 0 1 0 0 3 1 0 1 0 0 0 0 0 0 0 0 9 0 1003.5702 Q13123 Q13123 165 173 IK Protein Red yes yes 2 0.0011631 138.83 By MS/MS 5 0 1 1 387560 387560 0 5316 1335 5514 13081 9332 9332 1 15930 0 GLDGIKELEIGQAGSQR IIDEFEQKLRACHTRGLDGIKELEIGQAGS DGIKELEIGQAGSQRAPSAKKPSTGSRYQP R G L Q R A 1 1 0 1 0 2 2 4 0 2 2 1 0 0 0 1 0 0 0 0 0 0 17 1 1769.9272 Q15021 Q15021 1296 1312 NCAPD2 Condensin complex subunit 1 yes yes 2 0.0015071 152.11 By MS/MS 3 0 1 1 575100 575100 0 5317 1464 5515 13082 9333 9333 1 15013 0 GLDNKNPK IEIEKGEAVQEELLKGLDNKNPKIIVACIE VQEELLKGLDNKNPKIIVACIETLRKALSE K G L P K I 0 0 2 1 0 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 8 1 884.47158 Q14008 Q14008 132 139 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.012416 161.9 By MS/MS 2.5 0.5 1 1 2 737400 737400 0 5318 1405 5516 13083;13084 9334 9334 1 35834 0 GLDNTEFQGK FVHMERAEDAVEAIRGLDNTEFQGKRMHVQ VEAIRGLDNTEFQGKRMHVQLSTSRLRTAP R G L G K R 0 0 1 1 0 1 1 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1107.5197 Q9BWF3;Q9BQ04 Q9BWF3 130 139 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.048689 109.44 By MS/MS 7 0 1 1 1001000 1001000 0 5319 2392 5517 13085 9335 9335 0 17888 0 GLDPVEILQER LHQKQSRITPIQKPRGLDPVEILQEREYRL QKPRGLDPVEILQEREYRLQARIAHRIQEL R G L E R E 0 1 0 1 0 1 2 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1267.6772 P51532 P51532 360 370 SMARCA4 Transcription activator BRG1 yes yes 2 0.0052655 106.62 By MS/MS 3.5 1.12 1 1 1 1 4 583220 583220 0 5320 965 5518 13086;13087;13088;13089 9336;9337 9336 2 20922 0 GLDPYNVLAPK QATGLEREIMLAAKKGLDPYNVLAPKGASG AAKKGLDPYNVLAPKGASGTREDPNLVPSI K G L P K G 1 0 1 1 0 0 0 1 0 0 2 1 0 0 2 0 0 0 1 1 0 0 11 0 1185.6394 P10606 P10606 58 68 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 2 0.0018003 122.94 By MS/MS 10 0 1 1 2303800 2303800 0 5321 540 5519 13090 9338 9338 1 2448600 0 GLEAICAK IPAKKYVKLRFEPVRGLEAICAKFTHESQR LRFEPVRGLEAICAKFTHESQRQENHFVEG R G L A K F 2 0 0 0 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 860.44259 Q15392 Q15392 247 254 DHCR24 Delta(24)-sterol reductase yes yes 2 0.0094529 120.49 By MS/MS 1 0 1 1 414010 414010 0 5322 1497 5520 13091 9339 9339 1 20228 0 GLEDGEAGEEEEKEPLPSLDVFLSR AGTGVVGNKPRPRGRGLEDGEAGEEEEKEP EEKEPLPSLDVFLSRYTSEDNASFQEIMEV R G L S R Y 1 1 0 2 0 0 7 3 0 0 4 1 0 1 2 2 0 0 0 1 0 0 25 1 2744.3028 Q96DF8 Q96DF8 130 154 DGCR14 Protein DGCR14 yes yes 3 0.0011627 67.827 By MS/MS 6 0 1 1 542350 542350 0 5323 2150 5521 13092 9340 9340 1 4229.3 0 GLEELIDYTGGLK KVLHKFSGYGQLCERGLEELIDYTGGLKHE ERGLEELIDYTGGLKHEILQSHGQDAELSG R G L L K H 0 0 0 1 0 0 2 3 0 1 3 1 0 0 0 0 1 0 1 0 0 0 13 0 1406.7293 Q9H871 Q9H871 28 40 RMND5A Protein RMD5 homolog A yes yes 2 3.8651E-08 192.3 By MS/MS 7 0 1 1 324480 324480 0 5324 2523 5522 13093 9341 9341 1 5798.5 0 GLELISK HKGLLQLQWKQDLDRGLELISKAIEIDNKC QWKQDLDRGLELISKAIEIDNKCDFAYETM R G L S K A 0 0 0 0 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 7 0 758.4538 O94826 O94826 530 536 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.027704 116.54 By MS/MS 5 0 1 1 803850 803850 0 5325 353 5523 13094 9342 9342 1 33041 0 GLELLENSLLR IEVFLQRTEESVISKGLELLENSLLRIEDN VISKGLELLENSLLRIEDNSLLYQYLEIKS K G L L R I 0 1 1 0 0 0 2 1 0 0 5 0 0 0 0 1 0 0 0 0 0 0 11 0 1255.7136 Q92990 Q92990 335 345 GLMN Glomulin yes yes 2 1.1542E-10 201.61 By MS/MS 6 0 1 1 1731800 1731800 0 5326 2095 5524 13095 9343 9343 1 13504 0 GLEPCAISIEVLGAR MRDEAFDPFDKSSLRGLEPCAISIEVLGAR GLEPCAISIEVLGARHLPKNGRGIVCPFVE R G L A R H 2 1 0 0 1 0 2 2 0 2 2 0 0 0 1 1 0 0 0 1 0 0 15 0 1583.8341 P19174 P19174 1084 1098 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 0.010451 93.011 By MS/MS 3 0 1 1 82120 82120 0 5327 628 5525 13096 9344 9344 1 2143.8 0 GLEVTDDSPK LIMLDIYAIEELRARGLEVTDDSPKYNYHL ELRARGLEVTDDSPKYNYHLDSSGSYVFEN R G L P K Y 0 0 0 2 0 0 1 1 0 0 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1059.5084 P49588 P49588 477 486 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.0068004 108.43 By MS/MS 4 0 1 1 0 0 0 5328 921 5526 13097 9345 9345 1 0 0 GLFATQLIR RVSVEVRFVSSAKGKGLFATQLIRKGETIF SSAKGKGLFATQLIRKGETIFVERPLVAAQ K G L I R K 1 1 0 0 0 1 0 1 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1017.5971 Q6GMV2 Q6GMV2 35 43 SMYD5 SET and MYND domain-containing protein 5 yes yes 2 0.0014005 136.27 By MS/MS 7 0 1 1 294610 294610 0 5329 1680 5527 13098 9346 9346 1 5264.7 0 GLFDEYGSK VTFKSILFVPTSAPRGLFDEYGSKKSDYIK PTSAPRGLFDEYGSKKSDYIKLYVRRVFIT R G L S K K 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 1 0 0 1 0 0 0 9 0 1014.4658 P14625;Q58FF3 P14625 396 404 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 2 0.00024963 160.88 By MS/MS 5 0.816 1 1 1 3 6152200 6152200 0 5330 589 5528 13099;13100;13101 9347 9347 1 167130 0 GLFDEYGSKK VTFKSILFVPTSAPRGLFDEYGSKKSDYIK TSAPRGLFDEYGSKKSDYIKLYVRRVFITD R G L K K S 0 0 0 1 0 0 1 2 0 0 1 2 0 1 0 1 0 0 1 0 0 0 10 1 1142.5608 P14625;Q58FF3 P14625 396 405 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 2 0.036653 99.688 By MS/MS 4 0 1 1 1251700 1251700 0 5331 589 5529 13102 9348 9348 1 34171 0 GLFIIDDK QDYGVLKADEGISFRGLFIIDDKGILRQIT DEGISFRGLFIIDDKGILRQITVNDLPVGR R G L D K G 0 0 0 2 0 0 0 1 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 0 919.50148 Q13162;Q06830 Q06830 129 136 PRDX4;PRDX1 Peroxiredoxin-4;Peroxiredoxin-1 no no 2 0.030511 98.997 By MS/MS 9.5 0.5 1 1 2 972800 972800 0 5332 1277;1343 5530 13103;13104 9349;9350 9349 2 593010 0 GLFLPEDENLREK KLIRDEGLAVMDKAKGLFLPEDENLREKGD AKGLFLPEDENLREKGDWSQFTLWQQGRRN K G L E K G 0 1 1 1 0 0 3 1 0 0 3 1 0 1 1 0 0 0 0 0 0 0 13 1 1558.7991 Q12797 Q12797 610 622 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.00030878 145.46 By MS/MS 3.5 0.5 1 1 2 1139000 1139000 0 5333 1307 5531 13105;13106 9351 9351 1 30941 0 GLFTGLTPR LFSYAQHIASIDGRRGLFTGLTPRLCSGVL SIDGRRGLFTGLTPRLCSGVLGTVVHGKVL R G L P R L 0 1 0 0 0 0 0 2 0 0 2 0 0 1 1 0 2 0 0 0 0 0 9 0 960.53927 Q9Y6C9 Q9Y6C9 69 77 MTCH2 Mitochondrial carrier homolog 2 yes yes 2 0.0055602 114.5 By MS/MS 8 0 1 1 353100 353100 0 5334 3000 5532 13107 9352 9352 1 23294 0 GLGAGAGAGEESPATSLPR VLLGAYRLWVRWGRRGLGAGAGAGEESPAT GAGAGEESPATSLPRMKKRDFSLEQLRQYD R G L P R M 4 1 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 19 0 1696.838 O15173 O15173 79 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 3.2835E-19 237.59 By MS/MS 8.5 0.5 1 1 2 3325400 3325400 0 5335 157 5533 13108;13109 9353;9354;9355 9353 3 578180 0 GLGATFILR KISQFLGICIQRSGRGLGATFILRNVIEGQ IQRSGRGLGATFILRNVIEGQGVEICFELY R G L L R N 1 1 0 0 0 0 0 2 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 946.56 P49406 P49406 144 152 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 2.3468E-06 187.34 By MS/MS 8 0 1 1 451690 451690 0 5336 917 5534 13110 9356 9356 1 29798 0 GLGATLLR TRDLLRSRGIAGLYKGLGATLLRDVPFSVV GIAGLYKGLGATLLRDVPFSVVYFPLFANL K G L L R D 1 1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 1 0 0 0 0 0 8 0 799.49159 Q9H936;Q9H1K4 Q9H936 189 196 SLC25A22;SLC25A18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 yes no 2 0.020267 106.42 By MS/MS 8 0 1 1 6168900 6168900 0 5337 2528 5535 13111 9357 9357 1 406960 0 GLGDCLVK LAADVGKAGAEREFRGLGDCLVKIYKSDGI GAEREFRGLGDCLVKIYKSDGIKGLYQGFN R G L V K I 0 0 0 1 1 0 0 2 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 860.44259 P05141;P12236 P05141 156 163 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.001422 166.05 By MS/MS 5.67 2.98 1 1 1 1 1 1 1 1 1 9 373420000 373420000 0 5338 469;563 5536 13112;13113;13114;13115;13116;13117;13118;13119;13120 9358;9359;9360;9361;9362;9363;9364;9365;9366;9367 9365 10 26782000 0 GLGDCLVKITK LAADVGKSGTEREFRGLGDCLVKITKSDGI REFRGLGDCLVKITKSDGIRGLYQGFSVSV R G L T K S 0 0 0 1 1 0 0 2 0 1 2 2 0 0 0 0 1 0 0 1 0 0 11 1 1202.6693 P12236 P12236 156 166 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.032006 110.53 By MS/MS 1 0 1 1 300680 300680 0 5339 563 5537 13121 9368 9368 1 14691 0 GLGDRPAPK PLPPAQPGAEGGGDRGLGDRPAPKDKWSNF EGGGDRGLGDRPAPKDKWSNFDPTGLERAA R G L P K D 1 1 0 1 0 0 0 2 0 0 1 1 0 0 2 0 0 0 0 0 0 0 9 1 909.50321 Q5T9A4;Q9NVI7 Q9NVI7 36 44 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.0017999 143.73 By MS/MS 5 0 1 1 3002000 3002000 0 5340 2655;1634 5538 13122 9369 9369 1 123390 0 GLGEEDIRR GGSWAQKFYQDGPGRGLGEEDIRRAREARP QDGPGRGLGEEDIRRAREARPRKTPRPQLS R G L R R A 0 2 0 1 0 0 2 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1043.536 Q96D53 Q96D53 53 61 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.038814 104.75 By MS/MS 5.5 0.5 1 1 2 3579900 3579900 0 5341 2147 5539 13123;13124 9370 9370 1 35306 0 GLGLDDALEPR DVTRIERIGAHSHIRGLGLDDALEPRQASQ SHIRGLGLDDALEPRQASQGMVGQLAARRA R G L P R Q 1 1 0 2 0 0 1 2 0 0 3 0 0 0 1 0 0 0 0 0 0 0 11 0 1154.5932 Q9Y230 Q9Y230 30 40 RUVBL2 RuvB-like 2 yes yes 2 0.00066901 145.25 By MS/MS By MS/MS 7.43 1.5 3 1 1 1 1 6 1 40047000 39919000 128420 5342 2864 5540 13125;13126;13127;13128;13129;13130;13131 9371;9372;9373;9374 9372 4 544770 393870 GLGLDESGLAK STTKTQRIASHSHVKGLGLDESGLAKQAAS SHVKGLGLDESGLAKQAASGLVGQENAREA K G L A K Q 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1058.5608 Q9Y265 Q9Y265 23 33 RUVBL1 RuvB-like 1 yes yes 2 2.5102E-07 191.17 By MS/MS By MS/MS 7.8 1.6 2 1 1 1 4 1 67535000 67351000 183400 5343 2870 5541 13132;13133;13134;13135;13136 9375;9376;9377 9376 3 948630 562480 GLGLKPEKLEK LPADTCLLEFARLVRGLGLKPEKLEKDLDR RLVRGLGLKPEKLEKDLDRYSERARMKGGE R G L E K D 0 0 0 0 0 0 2 2 0 0 3 3 0 0 1 0 0 0 0 0 0 0 11 2 1210.7285 Q8NF37 Q8NF37 340 350 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2;3 0.015832 121.5 By MS/MS 6 0 2 2 7453300 7453300 0 5344 1967 5542 13137;13138 9378;9379 9379 2 58121 0 GLGLSPDLVVCR EQKTKPTQNSVRELRGLGLSPDLVVCRCSN ELRGLGLSPDLVVCRCSNPLDTSVKEKISM R G L C R C 0 1 0 1 1 0 0 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 12 0 1284.686 P17812 P17812 206 217 CTPS1 CTP synthase 1 yes yes 2 0.00045999 140.45 By MS/MS 5 0 1 1 1937900 1937900 0 5345 615 5543 13139 9380 9380 1 79655 0 GLGNTWTPICNTR PCYVDSEGIVRMLNRGLGNTWTPICNTREH NRGLGNTWTPICNTREHCKGKSDHYWVVGI R G L T R E 0 1 2 0 1 0 0 2 0 1 1 0 0 0 1 0 3 1 0 0 0 0 13 0 1488.7143 O75717 O75717 653 665 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 2.8728E-05 166.29 By MS/MS 3 0 1 1 929630 929630 0 5346 325 5544 13140 9381 9381 1 24268 0 GLGPLAEAAAAGDGAAAAGAAR GVFFSNNHPGAGGAKGLGPLAEAAAAGDGA AAAAGDGAAAAGAARAQYSLPGILHFLQHE K G L A R A 11 1 0 1 0 0 1 5 0 0 2 0 0 0 1 0 0 0 0 0 0 0 22 0 1807.9177 O43815 O43815 23 44 STRN Striatin yes yes 2 1.6281E-32 216.27 By MS/MS 4 0 1 1 510980 510980 0 5347 225 5545 13141 9382;9383 9383 2 13949 0 GLGPNLVGVAPSR LKSILEKEGPKSLFRGLGPNLVGVAPSRAV FRGLGPNLVGVAPSRAVYFACYSKAKEQFN R G L S R A 1 1 1 0 0 0 0 3 0 0 2 0 0 0 2 1 0 0 0 2 0 0 13 0 1235.6986 Q9BSK2;Q96CQ1 Q9BSK2 93 105 SLC25A33;SLC25A36 Solute carrier family 25 member 33;Solute carrier family 25 member 36 yes no 2 2.8728E-05 166.29 By MS/MS 8 0 1 1 4048000 4048000 0 5348 2340 5546 13142 9384 9384 1 267050 0 GLGSAFLR VADIPGIIRGAHQNRGLGSAFLRHIERCRF RGAHQNRGLGSAFLRHIERCRFLLFVVDLS R G L L R H 1 1 0 0 0 0 0 2 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 819.46029 Q9H4K7 Q9H4K7 291 298 MTG2 Mitochondrial ribosome-associated GTPase 2 yes yes 2 0.0008173 175.75 By MS/MS 7.5 0.5 1 1 2 573430 573430 0 5349 2501 5547 13143;13144 9385 9385 1 12318 0 GLGTGQGAVSGPPR KPEEPPPPKKPALDKGLGTGQGAVSGPPRK KGLGTGQGAVSGPPRKPPGTVAGTARGPEG K G L P R K 1 1 0 0 0 1 0 5 0 0 1 0 0 0 2 1 1 0 0 1 0 0 14 0 1252.6524 O00255 O00255 508 521 MEN1 Menin yes yes 2 0.0015009 120.03 By MS/MS 5 0 1 1 448570 448570 0 5350 83 5548 13145 9386 9386 0 18438 0 GLGTGTLYIAESR LLRQQPDTEAVLNGKGLGTGTLYIAESRLS GKGLGTGTLYIAESRLSWLDGSGLGFSLEY K G L S R L 1 1 0 0 0 0 1 3 0 1 2 0 0 0 0 1 2 0 1 0 0 0 13 0 1336.6987 P54105 P54105 31 43 CLNS1A Methylosome subunit pICln yes yes 2 1.25E-11 199.68 By MS/MS 9 1 1 1 2 2117000 2117000 0 5351 1012 5549 13146;13147 9387;9388 9387 2 309460 0 GLGVGFGSGGGSSSSVK GLSVGGSGFSASSGRGLGVGFGSGGGSSSS GVGFGSGGGSSSSVKFVSTTSSSRKSFKS_ R G L V K F 0 0 0 0 0 0 0 7 0 0 1 1 0 1 0 5 0 0 0 2 0 0 17 0 1438.7052 CON__P13647;P13647 CON__P13647 560 576 KRT5 Keratin, type II cytoskeletal 5 yes no 2 1.2489E-10 168.82 By matching By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 2 8 1893100 232670 1660400 + 5352 50 5550 13148;13149;13150;13151;13152;13153;13154;13155;13156;13157 9389;9390;9391;9392;9393;9394 9391 6 175960 3558600 GLGVSALCFK DSGIRLWHLVGRGYRGLGVSALCFKSRSRP GRGYRGLGVSALCFKSRSRPGTLKAVTLAG R G L F K S 1 0 0 0 1 0 0 2 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1050.5532 Q9NNW5 Q9NNW5 334 343 WDR6 WD repeat-containing protein 6 yes yes 2 0.006676 99.802 By MS/MS 1 0 1 1 157940 157940 0 5353 2571 5551 13158 9395 9395 1 7716.6 0 GLGWVQFSSEEGLR RRCILPFDKETGFHRGLGWVQFSSEEGLRN RGLGWVQFSSEEGLRNALQQENHIIDGVKV R G L L R N 0 1 0 0 0 1 2 3 0 0 2 0 0 1 0 2 0 1 0 1 0 0 14 0 1563.7682 Q9GZT3 Q9GZT3 61 74 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 1.413E-25 237.53 By MS/MS 10 0 1 1 1781600 1781600 0 5354 2443 5552 13159 9396 9396 1 1893700 0 GLHYDIQK EGIRKYDYNPSFAIRGLHYDIQKSLLMKID NPSFAIRGLHYDIQKSLLMKIDAFHYVQLG R G L Q K S 0 0 0 1 0 1 0 1 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 972.50288 Q9H857 Q9H857 120 127 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 3 0.011517 130.04 By MS/MS 6 0 1 1 2261700 2261700 0 5355 2522 5553 13160 9397 9397 1 17637 0 GLIEGSAQYR WASFLESLKKNDYFKGLIEGSAQYRERLEM NDYFKGLIEGSAQYRERLEMAENYFQLSVD K G L Y R E 1 1 0 0 0 1 1 2 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1092.5564 O95905 O95905 348 357 ECD Protein SGT1 yes yes 2 0.00097638 134.05 By MS/MS 5 0 1 1 1431800 1431800 0 5356 415 5554 13161 9398 9398 1 58851 0 GLIENPALLR LKREYLLQYNDPNRRGLIENPALLRWAYAR DPNRRGLIENPALLRWAYARTINVYPNFRP R G L L R W 1 1 1 0 0 0 1 1 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1094.6448 O95168 O95168 58 67 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 0.00022214 155.84 By MS/MS 10 0 1 1 3602500 3602500 0 5357 370 5555 13162 9399 9399 1 3829100 0 GLIVYQLENQPSEFR ADVIYPMAVVATAERGLIVYQLENQPSEFR GLIVYQLENQPSEFRRIESPLKHQHRCVAI R G L F R R 0 1 1 0 0 2 2 1 0 1 2 0 0 1 1 1 0 0 1 1 0 0 15 0 1791.9155 P78406 P78406 191 205 RAE1 mRNA export factor yes yes 2 0.0042436 107.17 By MS/MS 7 0 1 1 225550 225550 0 5358 1196 5556 13163 9400 9400 1 4030.6 0 GLLAAAPGLGPR CLQGFVGREVLSFHRGLLAAAPGLGPRAVC FHRGLLAAAPGLGPRAVCRGGSRCSPRARQ R G L P R A 3 1 0 0 0 0 0 3 0 0 3 0 0 0 2 0 0 0 0 0 0 0 12 0 1091.6451 Q8TB03 Q8TB03 46 57 CXorf38 Uncharacterized protein CXorf38 yes yes 2 0.001272 130.22 By MS/MS 7.5 0.5 1 1 2 949840 949840 0 5359 1985 5557 13164;13165 9401 9401 1 42473 0 GLLATASEDR GHVGIIFSMSYLESKGLLATASEDRSVRIW YLESKGLLATASEDRSVRIWKVGDLRVPGG K G L D R S 2 1 0 1 0 0 1 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1031.5247 Q9NNW5 Q9NNW5 222 231 WDR6 WD repeat-containing protein 6 yes yes 2 0.00054074 143.37 By MS/MS 1.5 0.5 1 1 2 347570 347570 0 5360 2571 5558 13166;13167 9402 9402 1 17071 0 GLLDVLPK RMLVVAEQPLHAMRKGLLDVLPKNSLEDLT PLHAMRKGLLDVLPKNSLEDLTAEDFRLLV K G L P K N 0 0 0 1 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 1 0 0 8 0 853.5273 O95071 O95071 2657 2664 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.027478 100.19 By MS/MS 2.5 1.12 1 1 1 1 4 567170 567170 0 5361 364 5559 13168;13169;13170;13171 9403 9403 1 22731 0 GLLDVTCK TLFELILAANYLDIKGLLDVTCKTVANMIK ANYLDIKGLLDVTCKTVANMIKGKTPEEIR K G L C K T 0 0 0 1 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 8 0 904.4688 P63208 P63208 114 121 SKP1 S-phase kinase-associated protein 1 yes yes 2 0.008595 123.69 By MS/MS 9.5 0.5 1 1 2 575830 575830 0 5362 1174 5560 13172;13173 9404;9405 9404 2 406910 0 GLLEYFK KLMEKEINGSKVTCRGLLEYFKAYIKIYQG NGSKVTCRGLLEYFKAYIKIYQGEDLPHPK R G L F K A 0 0 0 0 0 0 1 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 7 0 868.46945 Q6DD88 Q6DD88 320 326 ATL3 Atlastin-3 yes yes 2 0.019116 128.82 By MS/MS 6.5 0.5 1 1 2 1510700 1510700 0 5363 1677 5561 13174;13175 9406 9406 1 12617 0 GLLGSADK RKVTPLQKELQETLKGLLGSADKGSLEVAT ELQETLKGLLGSADKGSLEVATQYGWVLDA K G L D K G 1 0 0 1 0 0 0 2 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 759.41267 Q969Z0 Q969Z0 502 509 TBRG4 Protein TBRG4 yes yes 2 0.013795 114.78 By MS/MS 6 0 1 1 1461700 1461700 0 5364 2112 5562 13176 9407 9407 1 11398 0 GLLLFVDEADAFLR TAMHKLFDWANTSRRGLLLFVDEADAFLRK RGLLLFVDEADAFLRKRATEKISEDLRATL R G L L R K 2 1 0 2 0 0 1 1 0 0 4 0 0 2 0 0 0 0 0 1 0 0 14 0 1577.8453 Q9NVI7 Q9NVI7 453 466 ATAD3A ATPase family AAA domain-containing protein 3A no no 2 0.001232 120.06 By MS/MS 6 0 2 2 173220 173220 0 5365 2655 5563 13177;13178 9408;9409;9410 9408 3 1350.7 0 GLLNAIVIK LMKLPSDVVTAVRGKGLLNAIVIKETKDWD TAVRGKGLLNAIVIKETKDWDAWKVCLRLR K G L I K E 1 0 1 0 0 0 0 1 0 2 2 1 0 0 0 0 0 0 0 1 0 0 9 0 939.6117 P04181 P04181 375 383 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.00029258 158.08 By MS/MS 6.5 0.5 1 1 2 966890 966890 0 5366 447 5564 13179;13180 9411 9411 1 14568 0 GLLPQLLGVAPEK FKKVLRYEGFFGLYRGLLPQLLGVAPEKAI YRGLLPQLLGVAPEKAIKLTVNDFVRDKFM R G L E K A 1 0 0 0 0 1 1 2 0 0 4 1 0 0 2 0 0 0 0 1 0 0 13 0 1333.7969 Q9UJS0 Q9UJS0 393 405 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 4.9719E-05 158.56 By MS/MS 4.7 2.1 1 1 1 1 2 2 1 1 10 26290000 26290000 0 5367 2798 5565 13181;13182;13183;13184;13185;13186;13187;13188;13189;13190 9412;9413;9414;9415;9416;9417 9416 6 922930 0 GLLQLQWK CIDLEPDNATTYVHKGLLQLQWKQDLDRGL ATTYVHKGLLQLQWKQDLDRGLELISKAIE K G L W K Q 0 0 0 0 0 2 0 1 0 0 3 1 0 0 0 0 0 1 0 0 0 0 8 0 984.57565 O94826 O94826 517 524 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.0043796 143.02 By MS/MS 5 0 1 1 145430 145430 0 5368 353 5566 13191 9418 9418 1 5977.8 0 GLLQTEPQNNQAK NYRLKEYEKALKYVRGLLQTEPQNNQAKEL VRGLLQTEPQNNQAKELERLIDKAMKKDGL R G L A K E 1 0 2 0 0 3 1 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 13 0 1439.7369 Q9Y3D6 Q9Y3D6 96 108 FIS1 Mitochondrial fission 1 protein yes yes 2 1.5569E-17 218.07 By MS/MS 10 0 1 1 701320 701320 0 5369 2932 5567 13192 9419 9419 1 745430 0 GLLSSLDHTSIR SDLELHPPSYPWSHRGLLSSLDHTSIRRGF SHRGLLSSLDHTSIRRGFQVYKQVCASCHS R G L I R R 0 1 0 1 0 0 0 1 1 1 3 0 0 0 0 3 1 0 0 0 0 0 12 0 1297.699 P08574 P08574 100 111 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2 0.00036796 144.77 By MS/MS 8 0.816 1 1 1 3 2718500 2718500 0 5370 505 5568 13193;13194;13195 9420;9421 9420 2 190540 0 GLMMLVLEK DKVGSLVNARLEFSRGLMMLVLEKLATDIP RLEFSRGLMMLVLEKLATDIPCLLYDDNLF R G L E K L 0 0 0 0 0 0 1 1 0 0 3 1 2 0 0 0 0 0 0 1 0 0 9 0 1032.5712 Q6NUQ1 Q6NUQ1 375 383 RINT1 RAD50-interacting protein 1 yes yes 2 0.021756 95.741 By MS/MS 5 0 1 1 93040 93040 0 5371 1692 5569 13196 9422 9422 1 3824.3 0 GLNISAVR LPYDVTEESIKEFFRGLNISAVRLPREPSN SIKEFFRGLNISAVRLPREPSNPERLKGFG R G L V R L 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 828.48175 P23588 P23588 118 125 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0024972 153.71 By MS/MS 5 0 1 1 2853000 2853000 0 5372 672 5570 13197 9423 9423 1 117270 0 GLNNLLDENR EKQLLGEHLTAILQKGLNNLLDENRIQDLS AILQKGLNNLLDENRIQDLSLLYQLFSRVR K G L N R I 0 1 3 1 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1156.5836 Q13620 Q13620 460 469 CUL4B Cullin-4B yes yes 2 0.00024755 154.85 By MS/MS 4.5 0.5 1 1 2 906510 906510 0 5373 1390 5571 13198;13199 9424 9424 1 29856 0 GLNVDQLNMLGEK LSEVLSWQFSSVTKRGLNVDQLNMLGEKLL KRGLNVDQLNMLGEKLLGPNASPDGLIPWT R G L E K L 0 0 2 1 0 1 1 2 0 0 3 1 1 0 0 0 0 0 0 1 0 0 13 0 1429.7235 P42224 P42224 513 525 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 0.0022904 112.43 By MS/MS 5 0 1 1 232060 232060 0 5374 847 5572 13200 9425 9425 599 1 9538.6 0 GLPGLLSPR NPGRGDTWDFRTLLRGLPGLLSPREPLAVH FRTLLRGLPGLLSPREPLAVHTWAPTPQGL R G L P R E 0 1 0 0 0 0 0 2 0 0 3 0 0 0 2 1 0 0 0 0 0 0 9 0 908.54435 Q86YV9 Q86YV9 257 265 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.038157 86.472 By MS/MS 5 0 1 1 175770 175770 0 5375 1850 5573 13201 9426 9426 1 7224.8 0 GLPLVDDGGWNTVPISK SDKRRGGPPGPPISRGLPLVDDGGWNTVPI PLVDDGGWNTVPISKGSRPIDTSRLTKITK R G L S K G 0 0 1 2 0 0 0 3 0 1 2 1 0 0 2 1 1 1 0 2 0 0 17 0 1766.9203 Q04637 Q04637 1043 1059 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 2.6848E-10 159.66 By MS/MS 4.17 1.34 1 1 1 2 1 6 7293300 7293300 0 5376 1264 5574 13202;13203;13204;13205;13206;13207 9427;9428;9429;9430;9431;9432 9427 6 287840 0 GLQDVLR ARAQAALAVNISAARGLQDVLRTNLGPKGT AVNISAARGLQDVLRTNLGPKGTMKMLVSG R G L L R T 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 799.4552 P40227;Q92526 P40227 29 35 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 0.02507 117.16 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 116420000 116420000 0 5377 828 5575 13208;13209;13210;13211;13212;13213;13214;13215;13216 9433;9434;9435;9436;9437;9438 9438 6 1216800 0 GLREEIIRK GRAVKIRPKTKDWLKGLREEIIRKRDSMAP TKDWLKGLREEIIRKRDSMAPVSPTANSCL K G L R K R 0 2 0 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 9 2 1112.6666 O15056 O15056 973 981 SYNJ2 Synaptojanin-2 yes yes 3 0.0016226 125.82 By MS/MS 9 0 1 1 678590 678590 0 5378 144 5576 13217 9439 9439 1 389450 0 GLRKPEVGGVIR ______________________________ AARGLRKPEVGGVIRAIVRAGLAMPGPPLG R G L I R A 0 2 0 0 0 0 1 3 0 1 1 1 0 0 1 0 0 0 0 2 0 0 12 2 1279.7725 Q9Y3B7 Q9Y3B7 10 21 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 3 0.040115 71.888 By MS/MS 9 0 1 1 191800 191800 0 5379 2927 5577 13218 9440 9440 1 110070 0 GLSEDEKNTK IKDLAIKRRQILSNKGLSEDEKNTKLQELV ILSNKGLSEDEKNTKLQELVLKNPSGSGPP K G L T K L 0 0 1 1 0 0 2 1 0 0 1 2 0 0 0 1 1 0 0 0 0 0 10 1 1119.5408 Q9ULT8 Q9ULT8 2378 2387 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.014171 117.53 By MS/MS 2 0 1 1 354590 354590 0 5380 2826 5578 13219 9441 9441 1 17625 0 GLSEDVSISK PHLAREFMIKTRRRKGLSEDVSISKFFDDP TRRRKGLSEDVSISKFFDDPMLLELAKQDV K G L S K F 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 3 0 0 0 1 0 0 10 0 1033.5292 Q15029 Q15029 942 951 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.017055 94.409 By MS/MS By matching 4 0 2 1 1 2189400 2149700 39634 5381 1466 5579 13220;13221 9442 9442 1 58686 82817 GLSIEQLTTLAEK VAEVLSWQFSSTTKRGLSIEQLTTLAEKLL KRGLSIEQLTTLAEKLLGPGVNYSGCQITW R G L E K L 1 0 0 0 0 1 2 1 0 1 3 1 0 0 0 1 2 0 0 0 0 0 13 0 1401.7715 P40763 P40763 519 531 STAT3 Signal transducer and activator of transcription 3 yes yes 2 0.0013122 127.52 By MS/MS 5 0 1 1 432720 432720 0 5382 831 5580 13222 9443 9443 1 17786 0 GLSIIGVQQIDR AGCVPQAQPRQDYLKGLSIIGVQQIDRVVE YLKGLSIIGVQQIDRVVEVVEETIKGHSVR K G L D R V 0 1 0 1 0 2 0 2 0 3 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1297.7354 Q5VV42 Q5VV42 151 162 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 7.3378E-12 212.89 By MS/MS 6 0 1 1 2840800 2840800 0 5383 1652 5581 13223 9444 9444 1 22152 0 GLSLGFLEK LKNFVHAQCLELKAKGLSLGFLEKKHDEAS LELKAKGLSLGFLEKKHDEASSLSHPDLTS K G L E K K 0 0 0 0 0 0 1 2 0 0 3 1 0 1 0 1 0 0 0 0 0 0 9 0 962.54368 Q9NU22 Q9NU22 2897 2905 MDN1 Midasin yes yes 2 0.0006469 150.05 By MS/MS 1 0 1 1 177520 177520 0 5384 2635 5582 13224 9445 9445 1 8673.1 0 GLSPAQADSQFLENAK KELEEKVAELHKTHRGLSPAQADSQFLENA LSPAQADSQFLENAKRLSMYGVDLHHAKDS R G L A K R 3 0 1 1 0 2 1 1 0 0 2 1 0 1 1 2 0 0 0 0 0 0 16 0 1674.8213 O43491 O43491 384 399 EPB41L2 Band 4.1-like protein 2 yes yes 2 1.1028E-28 234.83 By MS/MS 3 0 1 1 423030 423030 0 5385 204 5583 13225 9446 9446 1 11043 0 GLSQSALPYR ______________________________ HAPGKGLSQSALPYRRSVPTWLKLTSDDVK K G L Y R R 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 2 0 0 1 0 0 0 10 0 1090.5771 P62277 P62277 10 19 RPS13 40S ribosomal protein S13 yes yes 2 0.00062406 140.11 By MS/MS 9.5 0.5 1 1 2 3961700 3961700 0 5386 1126 5584 13226;13227 9447 9447 1 3634800 0 GLSSEAVTSLLPK AQRANLFHKLVTELRGLSSEAVTSLLPKLI LRGLSSEAVTSLLPKLIEVSSPITLQALIQ R G L P K L 1 0 0 0 0 0 1 1 0 0 3 1 0 0 1 3 1 0 0 1 0 0 13 0 1300.7238 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 354 366 yes yes 2 0.0098485 95.523 By MS/MS 1 0 1 1 82422 82422 0 + 5387 31 5585 13228 9448;9449 9449 2 4027 0 GLSSILDAAR VMGNRRSDEPAKTKKGLSSILDAARWNRGE AKTKKGLSSILDAARWNRGEPQVPDFRHLK K G L A R W 2 1 0 1 0 0 0 1 0 1 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1001.5506 Q92888 Q92888 264 273 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 2 0.0031126 113.62 By MS/MS 3.5 0.5 1 1 2 486920 486920 0 5388 2085 5586 13229;13230 9450 9450 1 13120 0 GLSSLLCNFTK AVREPKLPVLAGCLKGLSSLLCNFTKSMEE GCLKGLSSLLCNFTKSMEEDPQTSREIFNF K G L T K S 0 0 1 0 1 0 0 1 0 0 3 1 0 1 0 2 1 0 0 0 0 0 11 0 1238.6329 P78527 P78527 226 236 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0015913 125.74 By MS/MS 1 0 1 1 70917 70917 0 5389 1197 5587 13231 9451;9452 9451 2 3464.8 0 GLSSLLYGSIPK VRQTVRSHGVLGLYRGLSSLLYGSIPKAAV LYRGLSSLLYGSIPKAAVRFGMFEFLSNHM R G L P K A 0 0 0 0 0 0 0 2 0 1 3 1 0 0 1 3 0 0 1 0 0 0 12 0 1233.6969 P53007 P53007 86 97 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0031012 138.22 By MS/MS 8.5 0.5 1 1 2 1558900 1558900 0 5390 996 5588 13232;13233 9453 9453 1 116640 0 GLTAVSNNAGVDNFGLGLLLR IPENLIDALLKTGVKGLTAVSNNAGVDNFG NNAGVDNFGLGLLLRSKQIKRMVSSYVGEN K G L L R S 2 1 3 1 0 0 0 4 0 0 5 0 0 1 0 1 1 0 0 2 0 0 21 0 2100.1328 P55809 P55809 84 104 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 1.8328E-40 246.66 By MS/MS 6 0 1 1 839310 839310 0 5391 1038 5589 13234 9454 9454 1 6545 0 GLTEQEVETILDK YLSLFIDDKLKKGVKGLTEQEVETILDKAM VKGLTEQEVETILDKAMVLFRFMQEKDVFE K G L D K A 0 0 0 1 0 1 3 1 0 1 2 1 0 0 0 0 2 0 0 1 0 0 13 0 1473.7563 Q13618 Q13618 402 414 CUL3 Cullin-3 yes yes 2 0.0013487 150.14 By MS/MS 4.5 0.5 1 1 2 942850 942850 0 5392 1389 5590 13235;13236 9455 9455 1 32639 0 GLTPSQIGVILR TSDDVKEQIYKLAKKGLTPSQIGVILRDSH AKKGLTPSQIGVILRDSHGVAQVRFVTGNK K G L L R D 0 1 0 0 0 1 0 2 0 2 2 0 0 0 1 1 1 0 0 1 0 0 12 0 1252.7503 P62277 P62277 44 55 RPS13 40S ribosomal protein S13 yes yes 2 0.001196 131.09 By MS/MS 9.5 0.5 1 1 2 1632500 1632500 0 5393 1126 5591 13237;13238 9456;9457 9457 2 1494300 0 GLTSVINQK ENEVFLSLPCILNARGLTSVINQKLKDDEV CILNARGLTSVINQKLKDDEVAQLKKSADT R G L Q K L 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 P07195 P07195 300 308 LDHB L-lactate dehydrogenase B chain yes yes 2 0.00080137 146.58 By MS/MS 8.5 0.5 1 1 2 12771000 12771000 0 5394 486 5592 13239;13240 9458 9458 1 916250 0 GLVASLISVK AYKDPEKNWNRNCVKGLVASLISVKDTSAT RNCVKGLVASLISVKDTSATTALELVAGER K G L V K D 1 0 0 0 0 0 0 1 0 1 2 1 0 0 0 2 0 0 0 2 0 0 10 0 985.61718 O95347 O95347 524 533 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00015623 159.28 By MS/MS 3 0 1 1 334860 334860 0 5395 385 5593 13241 9459 9459 1 8741.6 0 GLVEPVDVVDNADGTQTVNYVPSR KAGVAPLQVKVQGPKGLVEPVDVVDNADGT DNADGTQTVNYVPSREGPYSISVLYGDEEV K G L S R E 1 1 2 3 0 1 1 2 0 0 1 0 0 0 2 1 2 0 1 6 0 0 24 0 2543.2504 P21333 P21333 1492 1515 FLNA Filamin-A yes yes 2 4.7604E-06 133.86 By MS/MS 2.5 0.5 1 1 2 823120 823120 0 5396 648 5594 13242;13243 9460 9460 1 37575 0 GLVFLNGK QKLEDAEARERQLEKGLVFLNGKLGRII__ RERQLEKGLVFLNGKLGRII__________ K G L G K L 0 0 1 0 0 0 0 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 846.49634 L0R8F8 L0R8F8 58 65 SMCR7L yes yes 2 0.016506 111.28 By MS/MS 10 0 1 1 150180 150180 0 5397 66 5595 13244 9461 9461 1 159620 0 GLVGEIIK LERTFIAIKPDGVQRGLVGEIIKRFEQKGF KPDGVQRGLVGEIIKRFEQKGFRLVAMKFL R G L I K R 0 0 0 0 0 0 1 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 827.51165 P15531;P22392 P22392 19 26 NME1;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase B no no 2 0.0094529 120.49 By MS/MS 9.5 0.5 1 1 2 1720900 1720900 0 5398 659;599 5596 13245;13246 9462 9462 1 1729000 0 GLVGEIIKR LERTFIAIKPDGVQRGLVGEIIKRFEQKGF PDGVQRGLVGEIIKRFEQKGFRLVAMKFLR R G L K R F 0 1 0 0 0 0 1 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 1 983.61277 P15531;P22392 P22392 19 27 NME1;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase B no no 2 0.0089235 126.52 By MS/MS 9.5 0.5 1 1 2 1508600 1508600 0 5399 659;599 5597 13247;13248 9463 9463 1 1440100 0 GLVGNPLPSVR VNALLPTETFIPVIRGLVGNPLPSVRRKAL PVIRGLVGNPLPSVRRKALDLLNNKLQQNI R G L V R R 0 1 1 0 0 0 0 2 0 0 2 0 0 0 2 1 0 0 0 2 0 0 11 0 1107.64 Q9H583 Q9H583 1606 1616 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.01085 97.597 By MS/MS 2 0 1 1 369630 369630 0 5400 2503 5598 13249 9464 9464 1 18372 0 GLVHAAGPGQDSGSQAGSPPTR SRQQRDLHNLMVDLRGLVHAAGPGQDSGSQ PGQDSGSQAGSPPTRDRDVDVLSAALKEQL R G L T R D 3 1 0 1 0 2 0 5 1 0 1 0 0 0 3 3 1 0 0 1 0 0 22 0 2045.9879 Q96ER9 Q96ER9 271 292 CCDC51 Coiled-coil domain-containing protein 51 yes yes 3 0.017529 44.258 By MS/MS 7 0 1 1 690020 690020 0 5401 2166 5599 13250 9465 9465 1 12331 0 GLVLDHGAR MEMKHKSETDTSLIRGLVLDHGARHPDMKK DTSLIRGLVLDHGARHPDMKKRVEDAYILT R G L A R H 1 1 0 1 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 936.51411 P40227 P40227 209 217 CCT6A T-complex protein 1 subunit zeta yes yes 2 1.0469E-05 161.9 By MS/MS 5.71 2.12 1 1 2 2 1 7 131110000 131110000 0 5402 828 5600 13251;13252;13253;13254;13255;13256;13257 9466;9467;9468;9469;9470;9471 9467 6 1183200 0 GLVLDHGARHPDMK MEMKHKSETDTSLIRGLVLDHGARHPDMKK RGLVLDHGARHPDMKKRVEDAYILTCNVSL R G L M K K 1 1 0 2 0 0 0 2 2 0 2 1 1 0 1 0 0 0 0 1 0 0 14 1 1544.7882 P40227 P40227 209 222 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.028842 111.52 By MS/MS 6 0 1 1 2708100 2708100 0 5403 828 5601 13258 9472 9472 1 21118 0 GLVLGPIHK GLKGRLDYLSSLKVKGLVLGPIHKNQKDDV SSLKVKGLVLGPIHKNQKDDVAQTDLLQID K G L H K N 0 0 0 0 0 0 0 2 1 1 2 1 0 0 1 0 0 0 0 1 0 0 9 0 932.58074 P08195 P08195 258 266 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.002652 122.79 By MS/MS 5 0.816 1 1 1 3 3247000 3247000 0 5404 499 5602 13259;13260;13261 9473;9474 9474 2 88004 0 GLVQALQTK LSERAALQEELQLCKGLVQALQTKVTQQGL ELQLCKGLVQALQTKVTQQGLKMVVPGLDG K G L T K V 1 0 0 0 0 2 0 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 9 0 956.56548 P49327 P49327 1143 1151 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 2.6802E-07 194.9 By MS/MS 3 1.41 1 1 1 1 1 5 24478000 24478000 0 5405 915 5603 13262;13263;13264;13265;13266 9475;9476;9477;9478 9477 4 961200 0 GLVRECLAETER KSAMERLKRGIIHARGLVRECLAETERNAR HARGLVRECLAETERNARS___________ R G L E R N 1 2 0 0 1 0 3 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 12 1 1431.714 O14519 O14519 100 111 CDK2AP1 Cyclin-dependent kinase 2-associated protein 1 yes yes 3 0.011854 81.709 By MS/MS 10 0 1 1 127280 127280 0 5406 110 5604 13267 9479 9479 1 135290 0 GLVVDMDGFEEER YGFPVDLTGLIAEEKGLVVDMDGFEEERKL EKGLVVDMDGFEEERKLAQLKSQGKGAGGE K G L E R K 0 1 0 2 0 0 3 2 0 0 1 0 1 1 0 0 0 0 0 2 0 0 13 0 1494.6661 P49588 P49588 433 445 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.00049248 168.22 By MS/MS 4 0 1 1 259110 259110 0 5407 921 5605 13268 9480 9480 1 7073.3 0 GLVVPVIR YRDYIDISVAVATPRGLVVPVIRNVEAMNF VAVATPRGLVVPVIRNVEAMNFADIERTIT R G L I R N 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 3 0 0 8 0 851.55927 P36957 P36957 326 333 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.01708 110.54 By MS/MS By matching 6.33 0.471 2 1 2 1 8986500 8868400 118120 5408 812 5606 13269;13270;13271 9481 9481 1 74431 362270 GLVYETSVLDPDEGIR QITVDMMYGGMRGMKGLVYETSVLDPDEGI LVYETSVLDPDEGIRFRGFSIPECQKLLPK K G L I R F 0 1 0 2 0 0 2 2 0 1 2 0 0 0 1 1 1 0 1 2 0 0 16 0 1761.8785 O75390 O75390 77 92 CS Citrate synthase, mitochondrial yes yes 2 1.1096E-07 168.98 By MS/MS 7.5 0.5 1 1 2 9315400 9315400 0 5409 302 5607 13272;13273 9482 9482 1 181650 0 GLYAAAAGVLAGVESR ______________________________ LYAAAAGVLAGVESRQGSIKGLVYSSNFQN M G L S R Q 5 1 0 0 0 0 1 3 0 0 2 0 0 0 0 1 0 0 1 2 0 0 16 0 1503.8045 Q96P11 Q96P11 2 17 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 2 7.2087E-07 154.66 By MS/MS 6 0 1 1 133740 133740 0 5410 2235 5608 13274 9483 9483 1 1042.9 0 GLYAAFDCTATMK MERVFDYSEYWEGARGLYAAFDCTATMKSG ARGLYAAFDCTATMKSGNSDVYENEIPGGQ R G L M K S 3 0 0 1 1 0 0 1 0 0 1 1 1 1 0 0 2 0 1 0 0 0 13 0 1447.6476 P11498 P11498 843 855 PC Pyruvate carboxylase, mitochondrial yes yes 2 1.3924E-05 169.37 By MS/MS 3.5 0.5 1 1 2 789840 789840 0 5411 555 5609 13275;13276 9484 9484 348 1 21385 0 GLYDGPVCEVSVTPK IKARSRLAELRGVPRGLYDGPVCEVSVTPK GLYDGPVCEVSVTPKTVTPASSAKTSPAKQ R G L P K T 0 0 0 1 1 0 1 2 0 0 1 1 0 0 2 1 1 0 1 3 0 0 15 0 1619.7865 Q16555 Q16555 497 511 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 2 1.5858E-09 137.4 By MS/MS 5 0 1 1 0 0 0 5412 1540 5610 13277 9485 9485 1 0 0 GMDDDRGPR REPSLRPDDDRVPRRGMDDDRGPRRGPEED DRVPRRGMDDDRGPRRGPEEDRFSRRGADD R G M P R R 0 2 0 3 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 9 1 1017.4298 Q14152 Q14152 961 969 EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 2 0.035142 116.25 By MS/MS By matching 3 0 2 1 1 521250 491270 29984 5413 1409 5611 13278;13279 9486 9486 1 12825 42973 GMDKLIVDGR CQVIAEAVRTTLGPRGMDKLIVDGRGKATI TLGPRGMDKLIVDGRGKATISNDGATILKL R G M G R G 0 1 0 2 0 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 0 0 10 1 1102.5805 Q99832 Q99832 44 53 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.00058885 167.93 By MS/MS 6 0 2 2 29949000 29949000 0 5414 2295 5612 13280;13281 9487;9488 9487 2 233540 0 GMFTAEDLR HPYDAAKDSILRRARGMFTAEDLR______ ILRRARGMFTAEDLR_______________ R G M L R - 1 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 9 0 1038.4804 Q16864 Q16864 111 119 ATP6V1F V-type proton ATPase subunit F yes yes 2 0.0019963 130.75 By MS/MS 10 0 1 1 207730 207730 0 5415 1552 5613 13282 9489 9489 1 220800 0 GMGFLMR SATADRIPIAVSGVRGMGFLMRHHIETGGG PIAVSGVRGMGFLMRHHIETGGGQLPAKLS R G M M R H 0 1 0 0 0 0 0 2 0 0 1 0 2 1 0 0 0 0 0 0 0 0 7 0 810.38805 Q92616 Q92616 2531 2537 GCN1L1 Translational activator GCN1 yes yes 2 0.040383 69.39 By MS/MS By matching 1.67 0.471 1 2 1 2 378290 242000 136290 5416 2068 5614 13283;13284;13285 9490 9490 1345;1346 1 12029 125400 GMGGLFSVGETTAK YTIRRGPAGIGRTGRGMGGLFSVGETTAKV RGMGGLFSVGETTAKVLKDEIDVKFKDVAG R G M A K V 1 0 0 0 0 0 1 4 0 0 1 1 1 1 0 1 2 0 0 1 0 0 14 0 1353.6599 Q9Y4W6 Q9Y4W6 284 297 AFG3L2 AFG3-like protein 2 yes yes 2 1.1576E-05 167.11 By MS/MS 5 0 1 1 632490 632490 0 5417 2960 5615 13286 9491 9491 1 25998 0 GMGLSLMR RPLWFICSGMGTQWRGMGLSLMRLDRFRDS GMGTQWRGMGLSLMRLDRFRDSILRSDEAV R G M M R L 0 1 0 0 0 0 0 2 0 0 2 0 2 0 0 1 0 0 0 0 0 0 8 0 863.43573 P49327 P49327 505 512 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00269 143.02 By MS/MS 2 0.756 2 3 2 7 5074100 5074100 0 5418 915 5616;5617 13287;13288;13289;13290;13291;13292;13293 9492;9493;9494;9495 9494 655;656 4 238930 0 GMIDGSTPTITPNPNFR NALLEPGGVLTISERGMIDGSTPTITPNPN IDGSTPTITPNPNFRLFLSMDPVHGDISRA R G M F R L 0 1 2 1 0 0 0 2 0 2 0 0 1 1 3 1 3 0 0 0 0 0 17 0 1816.8778 Q9NU22 Q9NU22 2271 2287 MDN1 Midasin yes yes 2 0.0026462 109 By MS/MS 2 0.816 1 1 1 3 1362800 1362800 0 5419 2635 5618 13294;13295;13296 9496;9497 9496 1559 2 60098 0 GMKVLLR REGLESLQGGVCLTRGMKVLLRVGQSPRGG QGGVCLTRGMKVLLRVGQSPRGGAVPRKPV R G M L R V 0 1 0 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 1 0 0 7 1 815.50513 Q15768 Q15768 160 166 EFNB3 Ephrin-B3 yes yes 2 0.019311 103.28 By MS/MS 8 0 1 1 0 0 0 5420 1519 5619 13297 9498 9498 1166 1 0 0 GMLHQDHITFAMLLAR ITKDLFQVAFNRVARGMLHQDHITFAMLLA MLHQDHITFAMLLARIKLKGTVGEPTYDAE R G M A R I 2 1 0 1 0 1 0 1 2 1 3 0 2 1 0 0 1 0 0 0 0 0 16 0 1852.944 Q14204 Q14204 3874 3889 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.032219 53.569 By MS/MS 3.5 0.5 1 1 2 834800 834800 0 5421 1421 5620 13298;13299 9499 9499 1103;1104 1 21959 0 GMQVINPMGWDAFGLPAENAAVER VYTISDTIARFQKMRGMQVINPMGWDAFGL WDAFGLPAENAAVERNLHPQSWTQSNIKHM R G M E R N 4 1 2 1 0 1 2 3 0 1 1 0 2 1 2 0 0 1 0 2 0 0 24 0 2572.2203 Q15031 Q15031 119 142 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 3 0.0097305 53.444 By MS/MS 4 0 1 1 220290 220290 0 5422 1467 5621 13300 9500;9501 9500 1149;1150 2 6013.5 0 GMSIDQALAQLEFNDK KYSKDKMWYLAKLIRGMSIDQALAQLEFND MSIDQALAQLEFNDKKGAKIIKEVLLEAQD R G M D K K 2 0 1 2 0 2 1 1 0 1 2 1 1 1 0 1 0 0 0 0 0 0 16 0 1778.8509 Q9NWU5 Q9NWU5 90 105 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 1.5754E-10 187.74 By MS/MS 9 0 1 1 232260 232260 0 5423 2670 5622 13301 9502 9502 1574 1 133300 0 GMSLNLEPDNVGVVVFGNDK NVQAEEMVEFSSGLKGMSLNLEPDNVGVVV LEPDNVGVVVFGNDKLIKEGDIVKRTGAIV K G M D K L 0 0 3 2 0 0 1 3 0 0 2 1 1 1 1 1 0 0 0 4 0 0 20 0 2103.0307 P25705 P25705 104 123 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 2.2391E-18 180.93 By MS/MS 6 0 3 3 13642000 13642000 0 5424 687 5623;5624 13302;13303;13304 9503;9504;9505 9504 459 3 106380 0 GMSLNLEPDNVGVVVFGNDKLIK NVQAEEMVEFSSGLKGMSLNLEPDNVGVVV DNVGVVVFGNDKLIKEGDIVKRTGAIVDVP K G M I K E 0 0 3 2 0 0 1 3 0 1 3 2 1 1 1 1 0 0 0 4 0 0 23 1 2457.2937 P25705 P25705 104 126 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 8.7912E-08 123.63 By MS/MS 6 0 1 1 6449600 6449600 0 5425 687 5625 13305 9506 9506 459 1 50294 0 GMTPFMSAVSGR LQPYLRELLSAKDARGMTPFMSAVSGRAYP DARGMTPFMSAVSGRAYPAAITILETAQKI R G M G R A 1 1 0 0 0 0 0 2 0 0 0 0 2 1 1 2 1 0 0 1 0 0 12 0 1239.574 O95071 O95071 1113 1124 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0011894 106.4 By MS/MS 1.5 0.5 1 1 2 677850 677850 0 5426 364 5626 13306;13307 9507 9507 194;195 1 33475 0 GMTVEGLK WDDPRFPTVRGVLRRGMTVEGLKQFIAAQG VRGVLRRGMTVEGLKQFIAAQGSSRSVVNM R G M L K Q 0 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 1 0 0 8 0 833.43169 P07814 P07814 465 472 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.047433 83.753 By MS/MS 3 0 1 1 329820 329820 0 5427 493 5627 13308 9508 9508 1 8610 0 GNAAVLDYCR AKREGPPFISEAAVRGNAAVLDYCRTSVSA EAAVRGNAAVLDYCRTSVSALSGATAGILG R G N C R T 2 1 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 10 0 1137.5237 Q9BV81 Q9BV81 21 30 EMC6 ER membrane protein complex subunit 6 yes yes 2 6.218E-11 209.6 By MS/MS 10 0 1 1 2033600 2033600 0 5428 2373 5628 13309 9509 9509 1 2161500 0 GNAAWQEQLK NSLSLADLCVWATLKGNAAWQEQLKQKKAP WATLKGNAAWQEQLKQKKAPVHVKRWFGFL K G N L K Q 2 0 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1143.5673 P07814 P07814 130 139 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 4.3996E-07 190.02 By MS/MS 3 0 1 1 4020500 4020500 0 5429 493 5629 13310 9510 9510 1 104950 0 GNAGQSNYGFANSAMER ELDYFVVFSSVSCGRGNAGQSNYGFANSAM AGQSNYGFANSAMERICEKRRHEGLPGLAV R G N E R I 3 1 3 0 0 1 1 3 0 0 0 0 1 1 0 2 0 0 1 0 0 0 17 0 1772.7536 P49327 P49327 2027 2043 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.602E-69 302.2 By MS/MS 2.78 1.31 2 2 2 2 1 9 14870000 14870000 0 5430 915 5630;5631 13311;13312;13313;13314;13315;13316;13317;13318;13319 9511;9512;9513;9514;9515;9516 9512 657 6 652530 0 GNCLPPLPLPR NRSLDRAKMAVIEYKGNCLPPLPLPRRDSH IEYKGNCLPPLPLPRRDSHLTLLNQLLQGL K G N P R R 0 1 1 0 1 0 0 1 0 0 3 0 0 0 4 0 0 0 0 0 0 0 11 0 1232.67 Q9NRX2 Q9NRX2 127 137 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.035918 80.455 By MS/MS 9.5 0.5 1 1 2 482860 482860 0 5431 2614 5632 13320;13321 9517 9517 1 302490 0 GNDTFVTLDEILR ATDIHLGFMEKDAVRGNDTFVTLDEILRLA VRGNDTFVTLDEILRLAQENEVDFILLGGD R G N L R L 0 1 1 2 0 0 1 1 0 1 2 0 0 1 0 0 2 0 0 1 0 0 13 0 1491.7569 P49959 P49959 33 45 MRE11A Double-strand break repair protein MRE11A yes yes 2 1.0701E-07 186.46 By MS/MS 5.5 0.5 1 1 2 147760 147760 0 5432 942 5633 13322;13323 9518;9519 9518 2 6073.4 0 GNDTPLALESTNTEKETSLEETK LEESKEMDIKRKENKGNDTPLALESTNTEK ESTNTEKETSLEETKIGEILIQGLTEDMVT K G N T K I 1 0 2 1 0 0 5 1 0 0 3 2 0 0 1 2 5 0 0 0 0 0 23 1 2506.1922 Q7Z6Z7 Q7Z6Z7 1719 1741 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.021288 52.464 By MS/MS 1 0 1 1 313940 313940 0 5433 1803 5634 13324 9520 9520 1 15338 0 GNEEAQIFRPLK VDQPIVKTATITEPRGNEEAQIFRPLKFNT EPRGNEEAQIFRPLKFNTTSVIKIAVEPVN R G N L K F 1 1 1 0 0 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 12 1 1400.7412 Q15029 Q15029 570 581 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 4.2659E-06 178.46 By MS/MS 5 0.816 1 1 1 3 4221200 4221200 0 5434 1466 5635 13325;13326;13327 9521 9521 1 101980 0 GNEIVLSAGSTPR VGEPTYDAEFQHFLRGNEIVLSAGSTPRIQ LRGNEIVLSAGSTPRIQGLTVEQAEAVVRL R G N P R I 1 1 1 0 0 0 1 2 0 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1299.6783 Q14204 Q14204 3911 3923 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.6035E-18 231.66 By MS/MS 2.5 1.12 1 1 1 1 4 3708700 3708700 0 5435 1421 5636 13328;13329;13330;13331 9522;9523;9524 9522 3 166100 0 GNELESIAFR RFESRDSCLRALTSRGNELESIAFRSEDIT ALTSRGNELESIAFRSEDITGQLGNNDDLI R G N F R S 1 1 1 0 0 0 2 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1134.5669 Q86US8 Q86US8 1332 1341 SMG6 Telomerase-binding protein EST1A yes yes 2 0.00017356 157.75 By MS/MS 3 0 1 1 576240 576240 0 5436 1824 5637 13332 9525 9525 1 15043 0 GNENANGAPAITLLIR SKKKVEFLKQIANTKGNENANGAPAITLLI NENANGAPAITLLIREKNESNKSSFDKMIE K G N I R E 3 1 3 0 0 0 1 2 0 2 2 0 0 0 1 0 1 0 0 0 0 0 16 0 1622.874 Q9Y5B9 Q9Y5B9 93 108 SUPT16H FACT complex subunit SPT16 yes yes 2 0.010512 92.151 By MS/MS 2 0.816 1 1 1 3 589400 589400 0 5437 2968 5638 13333;13334;13335 9526;9527 9526 2 19219 0 GNEVLYNGFTGR QKISNLLSDYGYHLRGNEVLYNGFTGRKIT HLRGNEVLYNGFTGRKITSQIFIGPTYYQR R G N G R K 0 1 2 0 0 0 1 3 0 0 1 0 0 1 0 0 1 0 1 1 0 0 12 0 1325.6364 P30876 P30876 1024 1035 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 7.0636E-11 199.82 By MS/MS 3.5 0.5 1 1 2 842370 842370 0 5438 748 5639 13336;13337 9528 9528 1 22127 0 GNFEHLTEK VVSTKTPDRKLIFGKGNFEHLTEKIRGSPD KLIFGKGNFEHLTEKIRGSPDITCVFLNVE K G N E K I 0 0 1 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1073.5142 O43824 O43824 156 164 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.0049109 131.12 By MS/MS 6 0 1 1 7573300 7573300 0 5439 228 5640 13338 9529 9529 1 59057 0 GNFLEIK RYAILNEPFKGEMNRGNFLEIKNKFLARRF PFKGEMNRGNFLEIKNKFLARRFKLLEQAL R G N I K N 0 0 1 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 7 0 819.44905 Q14839 Q14839 1772 1778 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.035712 111.01 By MS/MS 1.5 0.5 1 1 2 303920 303920 0 5440 1449 5641 13339;13340 9530 9530 1 15048 0 GNFNYIEFTR EEVDELYREAPIDKKGNFNYIEFTRILKHG PIDKKGNFNYIEFTRILKHGAKDKDD____ K G N T R I 0 1 2 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 10 0 1259.5935 P19105;O14950 P19105 151 160 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2 1.3439E-06 178.55 By MS/MS 9.5 0.5 1 1 2 962330 962330 0 5441 136 5642 13341;13342 9531;9532 9531 2 645120 0 GNHECASINR LAYKIKYPENFFLLRGNHECASINRIYGFY FFLLRGNHECASINRIYGFYDECKRRYNIK R G N N R I 1 1 2 0 1 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 10 0 1156.5044 P36873;P62136;P62140 P62136 123 132 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2;3 3.6544E-07 190.96 By MS/MS 8.2 0.748 1 2 2 5 2810400 2810400 0 5442 1114;810;1115 5643 13343;13344;13345;13346;13347 9533;9534 9533 2 211760 0 GNINICLMGDPGVAK LVGGVDQSPRGMKIRGNINICLMGDPGVAK GNINICLMGDPGVAKSQLLSYIDRLAPRSQ R G N A K S 1 0 2 1 1 0 0 3 0 2 1 1 1 0 1 0 0 0 0 1 0 0 15 0 1557.7643 P33993 P33993 373 387 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.0048036 122.33 By MS/MS 5.5 0.5 1 1 2 1105500 1105500 0 5443 775 5644 13348;13349 9535 9535 1 28385 0 GNIQEIQTR RDYLSPVLADLAQRRGNIQEIQTRQDNKVV DLAQRRGNIQEIQTRQDNKVVIGFVPLAEI R G N T R Q 0 1 1 0 0 2 1 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 9 0 1057.5516 Q969S9 Q969S9 713 721 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.0013283 137.05 By MS/MS 5 0 1 1 1417200 1417200 0 5444 2107 5645 13350 9536 9536 1 58253 0 GNIYPVPDSR GDYLLLKPEKCYLVKGNIYPVPDSRFPFLG CYLVKGNIYPVPDSRFPFLGVHFTPRMDGS K G N S R F 0 1 1 1 0 0 0 1 0 1 0 0 0 0 2 1 0 0 1 1 0 0 10 0 1116.5564 Q9H9P8 Q9H9P8 298 307 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.032182 83.883 By MS/MS 7 0 1 1 2806300 2806300 0 5445 2536 5646 13351 9537 9537 1 50149 0 GNKYSAQGER AAELSLLEKSLGLSKGNKYSAQGERQIPVL LGLSKGNKYSAQGERQIPVLQTNNGPSLTG K G N E R Q 1 1 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 10 1 1108.5261 O43324 O43324 19 28 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2;3 0.0013441 125.68 By MS/MS 9.33 0.471 2 1 3 969380 969380 0 5446 194 5647 13352;13353;13354 9538;9539 9539 2 596810 0 GNLANVIR VVRIPKEQGVLSFWRGNLANVIRYFPTQAL GVLSFWRGNLANVIRYFPTQALNFAFKDKY R G N I R Y 1 1 2 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 855.49265 P05141;Q9H0C2;P12235;P12236 P05141 73 80 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0008173 175.75 By MS/MS By matching 6.44 2.54 1 1 1 1 1 2 1 1 6 3 389570000 387930000 1643300 5447 469;563;562 5648 13355;13356;13357;13358;13359;13360;13361;13362;13363 9540;9541;9542;9543;9544;9545 9544 6 32637000 9815800 GNLASYPIDELVDR GCLNACTYCKTKHARGNLASYPIDELVDRA RGNLASYPIDELVDRAKQSFQEGVCEIWLT R G N D R A 1 1 1 2 0 0 1 1 0 1 2 0 0 0 1 1 0 0 1 1 0 0 14 0 1560.7784 Q5VV42 Q5VV42 228 241 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 0.0006295 163.71 By MS/MS 5.5 0.5 1 1 2 9177800 9177800 0 5448 1652 5649 13364;13365 9546 9546 1 78005 0 GNLGAGNGNLQGPR PPPSFHLGGPAVGPRGNLGAGNGNLQGPRH RGNLGAGNGNLQGPRHMQKGRVETSRVVHI R G N P R H 1 1 3 0 0 1 0 5 0 0 2 0 0 0 1 0 0 0 0 0 0 0 14 0 1323.6644 P43243 P43243 374 387 MATR3 Matrin-3 yes yes 2 0.0019295 117.71 By MS/MS 4 0 1 1 188020 188020 0 5449 861 5650 13366 9547 9547 0 5132.7 0 GNNLQDTLR VPAVQGFFRSISLSRGNNLQDTLRVLTLWF SISLSRGNNLQDTLRVLTLWFDYGHWPDVN R G N L R V 0 1 2 1 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1029.5203 P42345 P42345 1897 1905 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.0011492 138.98 By MS/MS 2 0 1 1 561750 561750 0 5450 849 5651 13367 9548 9548 1 27922 0 GNNVYCLDR IIRTLDLPIYVTRVKGNNVYCLDRECRPRV YVTRVKGNNVYCLDRECRPRVLTIDPTEFK K G N D R E 0 1 2 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1109.4924 P53621 P53621 575 583 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0010286 141.48 By MS/MS 2 1 1 1 2 1190800 1190800 0 5451 1005 5652 13368;13369 9549;9550 9549 2 39283 0 GNPTVEVDLFTSK MSILKIHAREIFDSRGNPTVEVDLFTSKGL SRGNPTVEVDLFTSKGLFRAAVPSGASTGI R G N S K G 0 0 1 1 0 0 1 1 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1405.7089 P06733 P06733 16 28 ENO1 Alpha-enolase yes yes 2 6.7246E-05 157.03 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 16228000 16195000 33144 5452 482 5653 13370;13371;13372;13373;13374;13375 9551 9551 1 221360 101650 GNQLEICAVVLR TFPGCLADQLVLKRRGNQLEICAVVLRQLS KRRGNQLEICAVVLRQLSPHKYYFLVGYSE R G N L R Q 1 1 1 0 1 1 1 1 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1370.734 Q96EL2 Q96EL2 114 125 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 2.9537E-09 195.51 By MS/MS 10 0 1 1 199390 199390 0 5453 2162 5654 13376 9552 9552 1 211930 0 GNSGQSVYSASK QGGSIVNVGSIVGLKGNSGQSVYSASKGGL GLKGNSGQSVYSASKGGLVGFSRALAKEVA K G N S K G 1 0 1 0 0 1 0 2 0 0 0 1 0 0 0 4 0 0 1 1 0 0 12 0 1183.5469 Q8N4T8 Q8N4T8 141 152 CBR4 Carbonyl reductase family member 4 yes yes 2 9.1017E-24 236.69 By MS/MS 9 0 1 1 527750 527750 0 5454 1916 5655 13377 9553 9553 1 302880 0 GNSLQEILER VEVKKSQHKYVIGPKGNSLQEILERTGVSV VIGPKGNSLQEILERTGVSVEIPPSDSISE K G N E R T 0 1 1 0 0 1 2 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1157.6041 Q00341 Q00341 315 324 HDLBP Vigilin yes yes 2 1.1689E-17 233.09 By MS/MS 3.5 0.5 1 1 2 7236800 7236800 0 5455 1231 5656 13378;13379 9554;9555 9554 2 189970 0 GNSLTLIDLPGHESLR SITDSCAVYRVNNNRGNSLTLIDLPGHESL NSLTLIDLPGHESLRLQFLERFKSSARAIV R G N L R L 0 1 1 1 0 0 1 2 1 1 4 0 0 0 1 2 1 0 0 0 0 0 16 0 1720.9108 Q9Y5M8 Q9Y5M8 110 125 SRPRB Signal recognition particle receptor subunit beta yes yes 2;3 2.4411E-07 159.58 By MS/MS 8.33 0.471 2 1 3 7912300 7912300 0 5456 2976 5657 13380;13381;13382 9556;9557 9556 2 620390 0 GNSLTVLDVLEGR KEFSHKNWLVFYKEKGNSLTVLDVLEGRTH EKGNSLTVLDVLEGRTHTISLPINLKTVFL K G N G R T 0 1 1 1 0 0 1 2 0 0 3 0 0 0 0 1 1 0 0 2 0 0 13 0 1371.7358 A3KMH1 A3KMH1 1247 1259 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 3.6352E-18 229.68 By MS/MS 3.5 1.12 1 1 1 1 4 813720 813720 0 5457 13 5658 13383;13384;13385;13386 9558;9559;9560 9559 3 28067 0 GNSRLNIWGEAR LQTFLSKRPMPLSARGNSRLNIWGEARVGS SARGNSRLNIWGEARVGSELCAGWEEQFEV R G N A R V 1 2 2 0 0 0 1 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 12 1 1371.7007 Q12789 Q12789 1171 1182 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.027793 112.3 By MS/MS 6 0 1 1 4647500 4647500 0 5458 1306 5659 13387 9561 9561 1 36242 0 GNVATEISIER VYGNCSTDFTVKTKKGNVATEISIERNLEK KTKKGNVATEISIERNLEKCDHFQPISTGV K G N E R N 1 1 1 0 0 0 2 1 0 2 0 0 0 0 0 1 1 0 0 1 0 0 11 0 1187.6146 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 194 204 yes yes 2 5.0175E-11 208.84 By MS/MS 5.67 2.56 1 1 1 1 1 1 6 3539200 3539200 0 + 5459 31 5660 13388;13389;13390;13391;13392;13393 9562;9563;9564 9564 3 495050 0 GNVDGVAATPTAASASCQYR ______________________________ VAATPTAASASCQYRCIECNQEAKELYRDY K G N Y R C 5 1 1 1 1 1 0 2 0 0 0 0 0 0 1 2 2 0 1 2 0 0 20 0 1994.9116 Q9H2C2 Q9H2C2 14 33 ARV1 Protein ARV1 yes yes 2 5.0032E-06 137.46 By MS/MS 1.5 0.5 1 1 2 238690 238690 0 5460 2474 5661 13394;13395 9565 9565 1 11731 0 GNVFAVEAENR VTNKERTELLPKTERGNVFAVEAENREMSK KTERGNVFAVEAENREMSKTSGRLNNGIPQ R G N N R E 2 1 2 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 11 0 1204.5836 Q9H6S0 Q9H6S0 151 161 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.0027323 117.25 By MS/MS 3 0 1 1 691350 691350 0 5461 2511 5662 13396 9566 9566 1 18048 0 GNYSTDQLCVLDNVK EFQPVFKMKIRKEGRGNYSTDQLCVLDNVK GNYSTDQLCVLDNVKMNLRRFIAYQETVEK R G N V K M 0 0 2 2 1 1 0 1 0 0 2 1 0 0 0 1 1 0 1 2 0 0 15 0 1724.8039 Q7Z4Q2 Q7Z4Q2 647 661 HEATR3 HEAT repeat-containing protein 3 yes yes 2 1.5724E-10 193.11 By MS/MS 5 0 1 1 591720 591720 0 5462 1795 5663 13397 9567 9567 1 24322 0 GPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ K G P Q K N 2 0 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 7 0 683.39662 P35527;CON__P35527 P35527 193 199 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.014142 142.53 By MS/MS By MS/MS 4.62 2.98 2 2 2 1 2 1 2 1 6 7 5134200 1941100 3193000 + 5463 791 5664 13398;13399;13400;13401;13402;13403;13404;13405;13406;13407;13408;13409;13410 9568;9569;9570;9571;9572;9573;9574;9575;9576;9577;9578;9579 9572 12 1036000 7797800 GPAEESSSWR EDRFRRPRDEGGWRRGPAEESSSWRDSSRR GGWRRGPAEESSSWRDSSRRDDRDRDDRRR R G P W R D 1 1 0 0 0 0 2 1 0 0 0 0 0 0 1 3 0 1 0 0 0 0 10 0 1104.4836 Q14152 Q14152 1251 1260 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00036462 150.27 By MS/MS 3 0 1 1 3408400 3408400 0 5464 1409 5665 13411 9580 9580 1 88976 0 GPAGDATVASEK PVPTEEGNPLLKHYRGPAGDATVASEKESV HYRGPAGDATVASEKESVM___________ R G P E K E 3 0 0 1 0 0 1 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 12 0 1101.5302 Q15758 Q15758 526 537 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.00015343 154.84 By MS/MS 1.5 0.5 1 1 2 380810 380810 0 5465 1518 5666 13412;13413 9581;9582 9582 2 18734 0 GPAGLGPR TRGPPRGGPGGELPRGPAGLGPRRSQQGPR PGGELPRGPAGLGPRRSQQGPRKEPRKIIA R G P P R R 1 1 0 0 0 0 0 3 0 0 1 0 0 0 2 0 0 0 0 0 0 0 8 0 723.40277 Q04637 Q04637 695 702 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0058354 133.99 By MS/MS 2.5 1.12 1 1 1 1 4 14100000 14100000 0 5466 1264 5667 13414;13415;13416;13417 9583;9584;9585 9583 3 685380 0 GPAGPALGR PVAEVKSSPVGGGPRGPAGPALGRHWGAGW VGGGPRGPAGPALGRHWGAGWDGGHHYPEM R G P G R H 2 1 0 0 0 0 0 3 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 794.43989 Q00587 Q00587 311 319 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.0036409 118.69 By MS/MS 6 0 1 1 1576400 1576400 0 5467 1234 5668 13418 9586 9586 1 12293 0 GPALINIQEYPIER QKLLCPVETHHIDIKGPALINIQEYPIERH KGPALINIQEYPIERHEERSLNFTEECASW K G P E R H 1 1 1 0 0 1 2 1 0 3 1 0 0 0 2 0 0 0 1 0 0 0 14 0 1611.8621 A3KMH1 A3KMH1 1076 1089 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0018374 144.1 By MS/MS 2.5 0.5 1 1 2 866900 866900 0 5468 13 5669 13419;13420 9587;9588 9587 2 31861 0 GPAPQDQAGPGGAPR FRIFIIWAISSWFRRGPAPQDQAGPGGAPR GPAPQDQAGPGGAPRVASRNLFPKDTLMNL R G P P R V 3 1 0 1 0 2 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 15 0 1374.664 O96005 O96005 76 90 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 2 3.2953E-07 166.04 By MS/MS 2 0.816 1 1 1 3 843900 843900 0 5469 418 5670 13421;13422;13423 9589;9590 9590 2 39396 0 GPATAEVPYPDDLVGFK LVLCDKPLSQDPQDRGPATAEVPYPDDLVG ATAEVPYPDDLVGFKLFLPEGPCDHTVVKL R G P F K L 2 0 0 2 0 0 1 2 0 0 1 1 0 1 3 0 1 0 1 2 0 0 17 0 1774.8778 Q15477 Q15477 889 905 SKIV2L Helicase SKI2W yes yes 2 0.00016531 132.86 By MS/MS 3.5 0.5 1 1 2 885860 885860 0 5470 1506 5671 13424;13425 9591 9591 1 23276 0 GPATVDLELDALEGK RPETSVWPLRHFNGRGPATVDLELDALEGK GPATVDLELDALEGKELMQDGASLSDSTED R G P G K E 2 0 0 2 0 0 2 2 0 0 3 1 0 0 1 0 1 0 0 1 0 0 15 0 1526.7828 Q96DT7 Q96DT7 157 171 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 2 1.9877E-10 237.67 By MS/MS 3 0 1 1 596560 596560 0 5471 2154 5672 13426 9592 9592 1 15573 0 GPCGSFDVR EEHGQLLALLAELLRGPCGSFDVRKTADD_ LAELLRGPCGSFDVRKTADD__________ R G P V R K 0 1 0 1 1 0 0 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 993.43381 Q7L2E3 Q7L2E3 1181 1189 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0051036 115.49 By MS/MS 3 0 1 1 731620 731620 0 5472 1763 5673 13427 9593 9593 1 19099 0 GPCQESFYNLGR IVQGFSFLNRYLSLRGPCQESFYNLGRGLH SLRGPCQESFYNLGRGLHQLGLIHLAIHYY R G P G R G 0 1 1 0 1 1 1 2 0 0 1 0 0 1 1 1 0 0 1 0 0 0 12 0 1426.6299 Q9Y5Q9 Q9Y5Q9 808 819 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 5.1744E-07 219.72 By MS/MS 4 0 1 1 1226500 1226500 0 5473 2978 5674 13428 9594 9594 1 33482 0 GPDALTLLEYTETR TVLEAGTQAPEGVARGPDALTLLEYTETRN RGPDALTLLEYTETRNQFLDELMELEIFLA R G P T R N 1 1 0 1 0 0 2 1 0 0 3 0 0 0 1 0 3 0 1 0 0 0 14 0 1577.7937 Q96JB5 Q96JB5 337 350 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2;3 1.3381E-35 267.07 By MS/MS 5 0.707 1 2 1 4 1908100 1908100 0 5474 2206 5675 13429;13430;13431;13432 9595;9596 9595 2 66331 0 GPDETLR NFGIPCELRVTSAHKGPDETLRIKAEYEGD LRVTSAHKGPDETLRIKAEYEGDGIPTVFV K G P L R I 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 7 0 786.38718 P22234 P22234 305 311 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.0093801 155.73 By MS/MS 7.5 0.5 1 1 2 2941500 2941500 0 5475 656 5676 13433;13434 9597 9597 1 56754 0 GPDFTPAFADFGR PKLPMRTLDPRILPRGPDFTPAFADFGRQT PRGPDFTPAFADFGRQTPGGRGVPLLNVGS R G P G R Q 2 1 0 2 0 0 0 2 0 0 0 0 0 3 2 0 1 0 0 0 0 0 13 0 1396.6412 O43432 O43432 674 686 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 6.1331E-05 157.38 By MS/MS 3 0.816 1 1 1 3 1019200 1019200 0 5476 200 5677 13435;13436;13437 9598;9599 9599 2 36980 0 GPDGLTAFEATDNQAIK CVKLLLSKGADKTVKGPDGLTAFEATDNQA DGLTAFEATDNQAIKALLQ___________ K G P I K A 3 0 1 2 0 1 1 2 0 1 1 1 0 1 1 0 2 0 0 0 0 0 17 0 1746.8424 P58546 P58546 98 114 MTPN Myotrophin yes yes 2 1.8195E-18 229.56 By MS/MS 10 0 1 1 705710 705710 0 5477 1060 5678 13438 9600 9600 1 750090 0 GPDNSMGFGAER DDASAPRLMVLRQPRGPDNSMGFGAERKIR QPRGPDNSMGFGAERKIRQAGVID______ R G P E R K 1 1 1 1 0 0 1 3 0 0 0 0 1 1 1 1 0 0 0 0 0 0 12 0 1236.5193 O75534 O75534 778 789 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.015905 90.434 By MS/MS 4.5 0.5 1 1 2 1288000 1288000 0 5478 316 5679 13439;13440 9601 9601 1 46555 0 GPDWILGEIK LSRGDWYKTKEILLKGPDWILGEIKTSGLR EILLKGPDWILGEIKTSGLRGRGGAGFPTG K G P I K T 0 0 0 1 0 0 1 2 0 2 1 1 0 0 1 0 0 1 0 0 0 0 10 0 1126.6023 P49821 P49821 72 81 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.00040831 159.58 By MS/MS 6.5 0.5 1 1 2 820780 820780 0 5479 936 5680 13441;13442 9602 9602 1 10961 0 GPESESEDHR QGLIRICSKPVVLPKGPESESEDHRASGEV VVLPKGPESESEDHRASGEVRTGKWKVPTY K G P H R A 0 1 0 1 0 0 3 1 1 0 0 0 0 0 1 2 0 0 0 0 0 0 10 0 1141.4636 P78527 P78527 500 509 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 6.6408E-05 169.44 By MS/MS 1.5 0.5 2 2 4 2848400 2848400 0 5480 1197 5681 13443;13444;13445;13446 9603;9604;9605;9606 9605 4 140330 0 GPESESEDHRASGEVR QGLIRICSKPVVLPKGPESESEDHRASGEV PESESEDHRASGEVRTGKWKVPTYKDYVDL K G P V R T 1 2 0 1 0 0 4 2 1 0 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1740.7663 P78527 P78527 500 515 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0017555 109.07 By MS/MS 1.5 0.5 1 1 2 2601500 2601500 0 5481 1197 5682 13447;13448 9607;9608 9608 2 127730 0 GPFADENFK DFVNGDGTGVASIYRGPFADENFKLRHSAP VASIYRGPFADENFKLRHSAPGLLSMANSG R G P F K L 1 0 1 1 0 0 1 1 0 0 0 1 0 2 1 0 0 0 0 0 0 0 9 0 1023.4662 O43447 O43447 93 101 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.046229 82.426 By MS/MS 10 0 1 1 710720 710720 0 5482 201 5683 13449 9609 9609 1 755420 0 GPFLVALGK GKRTPMCAHCNQVIRGPFLVALGKSWHPEE CNQVIRGPFLVALGKSWHPEEFNCAHCKNT R G P G K S 1 0 0 0 0 0 0 2 0 0 2 1 0 1 1 0 0 0 0 1 0 0 9 0 900.54329 Q96HC4 Q96HC4 429 437 PDLIM5 PDZ and LIM domain protein 5 yes yes 2 0.0012328 138.07 By MS/MS 5 0 1 1 818940 818940 0 5483 2190 5684 13450 9610 9610 1 33662 0 GPFTDVVTTNLK EQVLSLEPQHELKFRGPFTDVVTTNLKLGN KFRGPFTDVVTTNLKLGNPTDRNVCFKVKT R G P L K L 0 0 1 1 0 0 0 1 0 0 1 1 0 1 1 0 3 0 0 2 0 0 12 0 1290.682 O95292;Q9P0L0 O95292 20 31 VAPB;VAPA Vesicle-associated membrane protein-associated protein B/C;Vesicle-associated membrane protein-associated protein A no no 2 1.8865E-05 172.8 By MS/MS 8 0 1 1 2358100 2358100 0 5484 381;2728 5685 13451 9611 9611 1 155560 0 GPGASGEQPEPGEAAAGGAAEEAR LPPPLPPPSPPGSGRGPGASGEQPEPGEAA EPGEAAAGGAAEEARRLEQRWGFGLEELYG R G P A R R 7 1 0 0 0 1 5 6 0 0 0 0 0 0 3 1 0 0 0 0 0 0 24 0 2164.9621 Q9H3P7 Q9H3P7 50 73 ACBD3 Golgi resident protein GCP60 yes yes 2;3 1.0321E-10 171.29 By MS/MS 5 0 2 2 2118200 2118200 0 5485 2491 5686 13452;13453 9612;9613 9612 2 87066 0 GPGASVHDR SASATHGGGSPPGTRGPGASVHDRNANSYV SPPGTRGPGASVHDRNANSYVMVGTFNLPS R G P D R N 1 1 0 1 0 0 0 2 1 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 894.43078 P46379 P46379 119 127 BAG6 Large proline-rich protein BAG6 yes yes 2 0.0028304 120.87 By MS/MS 3 0 1 1 275260 275260 0 5486 880 5687 13454 9614 9614 1 7185.6 0 GPGGSSLLIEALSNSSHK KMEKSKDTYLLYEGRGPGGSSLLIEALSNS GSSLLIEALSNSSHKCQADIRHILNKNGGV R G P H K C 1 0 1 0 0 0 1 3 1 1 3 1 0 0 1 5 0 0 0 0 0 0 18 0 1752.9006 Q9BSH4 Q9BSH4 142 159 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 3 0.0032253 94.639 By MS/MS 8 0 1 1 1208100 1208100 0 5487 2337 5688 13455 9615 9615 1 79700 0 GPGLLESPSIFNFTADR PSKSHLRHAIPSAERGPGLLESPSIFNFTA GLLESPSIFNFTADRLINGVRSPQTRQAGQ R G P D R L 1 1 1 1 0 0 1 2 0 1 2 0 0 2 2 2 1 0 0 0 0 0 17 0 1819.9105 Q92615 Q92615 428 444 LARP4B La-related protein 4B yes yes 2 0.025052 76.326 By MS/MS 4 0 1 1 109460 109460 0 5488 2067 5689 13456 9616 9616 1 2988.1 0 GPGLYYVDSEGNR MGLSMGTMICGWDKRGPGLYYVDSEGNRIS KRGPGLYYVDSEGNRISGATFSVGSGSVYA R G P N R I 0 1 1 1 0 0 1 3 0 0 1 0 0 0 1 1 0 0 2 1 0 0 13 0 1425.6525 P28074 P28074 167 179 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.00022342 147.74 By MS/MS 9.5 0.5 1 1 2 2795400 2795400 0 5489 715 5690 13457;13458 9617 9617 1 1653200 0 GPGVGLLGISK FEEAVNYLLSHPEVKGPGVGLLGISKGGEL PEVKGPGVGLLGISKGGELCLSMASFLKGI K G P S K G 0 0 0 0 0 0 0 4 0 1 2 1 0 0 1 1 0 0 0 1 0 0 11 0 996.59678 Q86TX2;P49753 Q86TX2 223 233 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 2 0.00049282 143.04 By MS/MS 7 0 1 1 977690 977690 0 5490 1817 5691 13459 9618 9618 1 17472 0 GPIAFWAR VSKALMASMARRASRGPIAFWARRASRTRL MARRASRGPIAFWARRASRTRLAAWARRAL R G P A R R 2 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 0 8 0 916.49192 Q9UNF1 Q9UNF1 220 227 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.010097 133.99 By MS/MS 5 0 1 1 363150 363150 0 5491 2840 5692 13460 9619 9619 1 14927 0 GPIKFNVWDTAGQEK TLGVEVHPLVFHTNRGPIKFNVWDTAGQEK GPIKFNVWDTAGQEKFGGLRDGYYIQAQCA R G P E K F 1 0 1 1 0 1 1 2 0 1 0 2 0 1 1 0 1 1 0 1 0 0 15 1 1688.8522 P62826 P62826 57 71 RAN GTP-binding nuclear protein Ran yes yes 3 0.00058904 99.069 By MS/MS 9 0 1 1 354990 354990 0 5492 1146 5693 13461 9620 9620 1 203730 0 GPILMELQTYR REATRFAAAYCRSGKGPILMELQTYRYHGH RSGKGPILMELQTYRYHGHSMSDPGVSYRT K G P Y R Y 0 1 0 0 0 1 1 1 0 1 2 0 1 0 1 0 1 0 1 0 0 0 11 0 1319.6908 P08559;P29803 P08559 278 288 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2 4.1015E-06 176.33 By MS/MS 7 0 2 2 1862200 1862200 0 5493 504 5694;5695 13462;13463 9621;9622 9622 303 2 33277 0 GPILSFASTR LELNASDDRGIDIIRGPILSFASTRTIFKK IDIIRGPILSFASTRTIFKKGFKLVILDEA R G P T R T 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 2 1 0 0 0 0 0 10 0 1047.5713 P40937 P40937 103 112 RFC5 Replication factor C subunit 5 yes yes 2 0.0010271 143.04 By MS/MS 7.5 0.5 1 1 2 2424400 2424400 0 5494 833 5696 13464;13465 9623;9624 9624 2 97890 0 GPIQILNR RLKHMVDDKIHSRARGPIQILNRQPMEGRS KIHSRARGPIQILNRQPMEGRSRDGGLRFG R G P N R Q 0 1 1 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 8 0 909.5396 P30876 P30876 1065 1072 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.0024457 154.09 By MS/MS 3 0 1 1 901190 901190 0 5495 748 5697 13466 9625 9625 1 23526 0 GPIVPLNVADQK DGKTATQPLLKKESKGPIVPLNVADQKLLE ESKGPIVPLNVADQKLLEASTQFQKKQGKN K G P Q K L 1 0 1 1 0 1 0 1 0 1 1 1 0 0 2 0 0 0 0 2 0 0 12 0 1249.703 P55011 P55011 996 1007 SLC12A2 Solute carrier family 12 member 2 yes yes 2 0.020467 85.355 By MS/MS 2 0.816 1 1 1 3 565950 565950 0 5496 1022 5698 13467;13468;13469 9626 9626 1 23884 0 GPLMMYISK PDDEAAMGIKSCDPKGPLMMYISKMVPTSD KSCDPKGPLMMYISKMVPTSDKGRFYAFGR K G P S K M 0 0 0 0 0 0 0 1 0 1 1 1 2 0 1 1 0 0 1 0 0 0 9 0 1038.5242 P13639 P13639 392 400 EEF2 Elongation factor 2 yes yes 2 0.014227 79.713 By MS/MS 4 0 1 1 1171800 1171800 0 5497 576 5699 13470 9627 9627 365;366 1 31989 0 GPLPAAPPVAPER PLMDFGNDFVPPAPRGPLPAAPPVAPERQP PRGPLPAAPPVAPERQPSWDPSPVSSTVPA R G P E R Q 3 1 0 0 0 0 1 1 0 0 1 0 0 0 5 0 0 0 0 1 0 0 13 0 1270.7034 Q9NQC3 Q9NQC3 92 104 RTN4 Reticulon-4 yes yes 2 0.01047 94.692 By MS/MS 6.5 0.5 1 1 2 5974000 5974000 0 5498 2587 5700 13471;13472 9628 9628 1 51015 0 GPLQSVQVFGR ______________________________ MPSKGPLQSVQVFGRKKTATAVAHCKRGNG K G P G R K 0 1 0 0 0 2 0 2 0 0 1 0 0 1 1 1 0 0 0 2 0 0 11 0 1186.6459 P62249 P62249 5 15 RPS16 40S ribosomal protein S16 yes yes 2 0.00031944 157.75 By MS/MS By matching 10 0 2 1 1 6340400 6274000 66448 5499 1120 5701 13473;13474 9629;9630 9630 2 6668600 1704400 GPLSGHK FVPAVEKGFLDACEKGPLSGHKLSGLRFVL GFLDACEKGPLSGHKLSGLRFVLQDGAHHM K G P H K L 0 0 0 0 0 0 0 2 1 0 1 1 0 0 1 1 0 0 0 0 0 0 7 0 694.37622 Q96RP9 Q96RP9 597 603 GFM1 Elongation factor G, mitochondrial yes yes 2 0.034728 111.69 By MS/MS 5.5 0.5 1 1 2 816270 816270 0 5500 2247 5702 13475;13476 9631 9631 1 26528 0 GPLVNASLR KDTNVQVLMVLGAGRGPLVNASLRAAKQAD VLGAGRGPLVNASLRAAKQADRRIKLYAVE R G P L R A 1 1 1 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 9 0 925.53451 O14744 O14744 369 377 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0017265 132.76 By MS/MS By MS/MS 3.25 1.79 1 1 2 3 1 2302700 2125700 177050 5501 125 5703 13477;13478;13479;13480 9632;9633;9634;9635 9633 4 89245 523890 GPNKHTLTQIK IEKCNNPRSVTLLIKGPNKHTLTQIKDAVR LLIKGPNKHTLTQIKDAVRDGLRAVKNAID K G P I K D 0 0 1 0 0 1 0 1 1 1 1 2 0 0 1 0 2 0 0 0 0 0 11 1 1235.6986 P40227 P40227 378 388 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 2.6102E-15 223.87 By MS/MS 6.75 2.54 1 2 2 1 1 1 8 65945000 65945000 0 5502 828 5704 13481;13482;13483;13484;13485;13486;13487;13488 9636;9637;9638;9639 9638 4 881320 0 GPNQPVESDESLGGLSAALR APSGASAQAAEQLQRGPNQPVESDESLGGL VESDESLGGLSAALRSWHLTPSCPLDPAPL R G P L R S 2 1 1 1 0 1 2 3 0 0 3 0 0 0 2 3 0 0 0 1 0 0 20 0 1995.9861 P51617 P51617 581 600 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 8.3357E-51 268.13 By MS/MS 5 0 1 1 1528900 1528900 0 5503 971 5705 13489 9640 9640 1 62844 0 GPPASSPAPAPK QSQTQPVSLANTQPRGPPASSPAPAPKFSP QPRGPPASSPAPAPKFSPVTPKFTPVASKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 12 0 1075.5662 Q15942 Q15942 254 265 ZYX Zyxin yes yes 2 0.00079015 135.71 By MS/MS 5.5 0.5 1 1 2 1039900 1039900 0 5504 1528 5706 13490;13491 9641 9641 1 36385 0 GPPIEDAIASSDVLETASK VSSEENGHSFHTPQKGPPIEDAIASSDVLE EDAIASSDVLETASKSANPPHTIQASEEQS K G P S K S 3 0 0 2 0 0 2 1 0 2 1 1 0 0 2 3 1 0 0 1 0 0 19 0 1898.9473 Q9Y450 Q9Y450 196 214 HBS1L HBS1-like protein yes yes 2 0.0001221 151.54 By MS/MS 2.75 1.48 1 1 1 1 4 659910 659910 0 5505 2945 5707 13492;13493;13494;13495 9642;9643 9643 2 25580 0 GPPPPPGDENR TPTVLPMGAPVPRPRGPPPPPGDENREMDD PRPRGPPPPPGDENREMDDPSVGPKIPQAL R G P N R E 0 1 1 1 0 0 1 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 11 0 1131.5309 Q13435 Q13435 248 258 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.0042521 110.87 By MS/MS By matching 3 0 2 1 1 513290 490050 23245 5506 1369 5708 13496;13497 9644 9644 1 12793 33315 GPPQSPVFEGVYNNSR GAAAIGSARGQSTGKGPPQSPVFEGVYNNS PPQSPVFEGVYNNSRMLHFLTAVVGSTCDV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 Q8WWM7 Q8WWM7 107 122 ATXN2L Ataxin-2-like protein yes yes 2 2.8012E-06 180.85 By MS/MS 3 0 1 1 648820 648820 0 5507 2041 5709 13498 9645 9645 1 16937 0 GPQDPSACR CYKGTHNFHNFTSQKGPQDPSACRYILEMY NFTSQKGPQDPSACRYILEMYCEEPFVREG K G P C R Y 1 1 0 1 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 9 0 986.42398 Q9Y606 Q9Y606 253 261 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 0.026353 93.143 By MS/MS 7 0 1 1 957280 957280 0 5508 2992 5710 13499 9646 9646 1 17107 0 GPQVQQPPPSNR EMLGLSKVPLTQATRGPQVQQPPPSNRFLQ ATRGPQVQQPPPSNRFLQPVQKIDMNLTDL R G P N R F 0 1 1 0 0 3 0 1 0 0 0 0 0 0 4 1 0 0 0 1 0 0 12 0 1303.6633 Q15436 Q15436 217 228 SEC23A Protein transport protein Sec23A yes yes 2 0.0012089 130.94 By MS/MS 3 2 1 1 2 523190 523190 0 5509 1502 5711 13500;13501 9647;9648 9648 2 21753 0 GPSAFIPVEEVLR PGEEQRESRARRGPRGPSAFIPVEEVLREG PRGPSAFIPVEEVLREGAESLEQHLGLEAL R G P L R E 1 1 0 0 0 0 2 1 0 1 1 0 0 1 2 1 0 0 0 2 0 0 13 0 1412.7664 P58004 P58004 43 55 SESN2 Sestrin-2 yes yes 2 0.00077597 134.13 By MS/MS 8 1.41 1 1 1 1 1 5 4406400 4406400 0 5510 1058 5712 13502;13503;13504;13505;13506 9649 9649 1 98290 0 GPSFNQER QIPAQPSVAKVPYGKGPSFNQERGTSSHLP AKVPYGKGPSFNQERGTSSHLPPPPKLLAQ K G P E R G 0 1 1 0 0 1 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 8 0 933.43044 Q9Y520 Q9Y520 393 400 PRRC2C Protein PRRC2C yes yes 2 0.050062 91.318 By MS/MS 1.5 0.5 1 1 2 394600 394600 0 5511 2963 5713 13507;13508 9650 9650 1 19374 0 GPSGCVESLEVTCR LRHTGYVIELQHVVKGPSGCVESLEVTCRR KGPSGCVESLEVTCRRADAGEKPKAFIHWV K G P C R R 0 1 0 0 2 0 2 2 0 0 1 0 0 0 1 2 1 0 0 2 0 0 14 0 1549.6865 P47897 P47897 653 666 QARS Glutamine--tRNA ligase yes yes 2 2.9471E-12 206.36 By MS/MS 4.5 0.5 1 1 2 1801500 1801500 0 5512 896 5714 13509;13510 9651 9651 1 71453 0 GPSGLLVYQGK QYLESMQIGDTIEFRGPSGLLVYQGKGKFA IEFRGPSGLLVYQGKGKFAIRPDKKSNPII R G P G K G 0 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1117.6132 P00387 P00387 144 154 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 2 0.0001082 160.59 By MS/MS 8.5 0.5 1 1 2 3544200 3544200 0 5513 427 5715 13511;13512 9652 9652 1 255970 0 GPSSVEDIK QESFKKQEKTPKTPKGPSSVEDIKAKMQAS TPKTPKGPSSVEDIKAKMQASIEKGGSLPK K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 5.7155E-08 200.16 By MS/MS 5.5 3.2 1 1 1 1 4 7516100 7516100 0 5514 485 5716 13513;13514;13515;13516 9653;9654;9655;9656 9653 4 290230 0 GPSSVEDIKAK QESFKKQEKTPKTPKGPSSVEDIKAKMQAS KTPKGPSSVEDIKAKMQASIEKGGSLPKVE K G P A K M 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 2 0 0 0 1 0 0 11 1 1129.5979 P06748 P06748 240 250 NPM1 Nucleophosmin yes yes 3 0.0080515 91.469 By MS/MS 6.5 2.69 1 1 1 1 4 3688500 3688500 0 5515 485 5717 13517;13518;13519;13520 9657;9658 9658 2 99538 0 GPSTENQEAK VSWLTLSGPEQSSVRGPSTENQEAKRVALE QSSVRGPSTENQEAKRVALECIKQCDPEKM R G P A K R 1 0 1 0 0 1 2 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 10 0 1059.4833 Q92538 Q92538 1095 1104 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0006717 138.08 By MS/MS 2.5 0.5 1 1 2 283470 283470 0 5516 2055 5718 13521;13522 9659 9659 1 13867 0 GPSTENQEAKR VSWLTLSGPEQSSVRGPSTENQEAKRVALE SSVRGPSTENQEAKRVALECIKQCDPEKMI R G P K R V 1 1 1 0 0 1 2 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 11 1 1215.5844 Q92538 Q92538 1095 1105 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.029162 125.75 By MS/MS 2 0 1 1 0 0 0 5517 2055 5719 13523 9660 9660 1 0 0 GPTSYYYMLPMK RSPLWRGGGVAHGPRGPTSYYYMLPMKVRA GPRGPTSYYYMLPMKVRALGLKVALTVKLA R G P M K V 0 0 0 0 0 0 0 1 0 0 1 1 2 0 2 1 1 0 3 0 0 0 12 0 1449.6672 Q9BYD3 Q9BYD3 157 168 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 0.00065052 117.53 By MS/MS 8 0 1 1 481020 481020 0 5518 2414 5720 13524 9661 9661 1488;1489 1 31733 0 GPVEGYEENEEFLR FLEAADNLRLIQVPKGPVEGYEENEEFLRT KGPVEGYEENEEFLRTMHHLLLEVEVIEGT K G P L R T 0 1 1 0 0 0 5 2 0 0 1 0 0 1 1 0 0 0 1 1 0 0 14 0 1666.7475 Q9UI30 Q9UI30 69 82 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 1.1179E-18 280.17 By MS/MS 10 0 1 1 2708900 2708900 0 5519 2788 5721 13525 9662 9662 1 2879300 0 GPVGLEGLLTTK LGAEVGISTSRIHARGPVGLEGLLTTKWLL HARGPVGLEGLLTTKWLLRGKDHVVSDFSE R G P T K W 0 0 0 0 0 0 1 3 0 0 3 1 0 0 1 0 2 0 0 1 0 0 12 0 1183.6812 P54886 P54886 750 761 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 1.8512E-05 172.88 By MS/MS 5.45 2.74 1 1 1 1 2 1 1 1 1 1 11 49888000 49888000 0 5520 1019 5722 13526;13527;13528;13529;13530;13531;13532;13533;13534;13535;13536 9663;9664;9665;9666;9667;9668;9669;9670;9671;9672;9673;9674 9667 12 1951300 0 GPVREGDVLTLLESER EFMDDTSRSIIRNVKGPVREGDVLTLLESE PVREGDVLTLLESEREARRLR_________ K G P E R E 0 2 0 1 0 0 3 2 0 0 3 0 0 0 1 1 1 0 0 2 0 0 16 1 1768.9319 P62857 P62857 48 63 RPS28 40S ribosomal protein S28 yes yes 3 0.015734 64.537 By MS/MS 10 0 1 1 512570 512570 0 5521 1152 5723 13537 9675 9675 1 544810 0 GPVYIGELPQDFLR ______________________________ RGPVYIGELPQDFLRITPTQQQRQVQLDAQ R G P L R I 0 1 0 1 0 1 1 2 0 1 2 0 0 1 2 0 0 0 1 1 0 0 14 0 1602.8406 Q9H0E2 Q9H0E2 10 23 TOLLIP Toll-interacting protein yes yes 2 0.0056293 123.62 By MS/MS 8 0 1 1 158200 158200 0 5522 2454 5724 13538 9676 9676 1 10436 0 GPYESGSGHSSGLGHR SYGPYRSGSGWSSSRGPYESGSGHSSGLGH PYESGSGHSSGLGHRESRSGQSSGYGQHGS R G P H R E 0 1 0 0 0 0 1 5 2 0 1 0 0 0 1 4 0 0 1 0 0 0 16 0 1583.7077 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1038 1053 HRNR Hornerin yes no 2;3 0.007618 94.402 By MS/MS By MS/MS 6.1 2.55 1 1 3 1 1 1 2 2 8 3840200 423110 3417100 + 5523 64 5725 13539;13540;13541;13542;13543;13544;13545;13546;13547;13548 9677;9678;9679;9680 9678 4 313270 14467000 GQAFVIFK GHVVDIVALKTMKMRGQAFVIFKELGSSTN LKTMKMRGQAFVIFKELGSSTNALRQLQGF R G Q F K E 1 0 0 0 0 1 0 1 0 1 0 1 0 2 0 0 0 0 0 1 0 0 8 0 908.51199 P08579 P08579 50 57 SNRPB2 U2 small nuclear ribonucleoprotein B no no 2 0.031985 98.418 By MS/MS 8 0 1 1 565570 565570 0 5524 506 5726 13549 9681 9681 1 37311 0 GQAGALERPVLIHR QLDFQLPLRFDLQYKGQAGALERPVLIHRA KGQAGALERPVLIHRAVLGSVERLLGVLAE K G Q H R A 2 2 0 0 0 1 1 2 1 1 2 0 0 0 1 0 0 0 0 1 0 0 14 1 1515.8634 Q9BW92 Q9BW92 573 586 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 3 0.0096686 81.278 By MS/MS 5.5 0.5 1 1 2 7654800 7654800 0 5525 2391 5727 13550;13551 9682 9682 1 202320 0 GQAGFFSTPGGASR GEEGVGGAGGRDHLRGQAGFFSTPGGASRD RGQAGFFSTPGGASRDGSGPGEEGKQRTLT R G Q S R D 2 1 0 0 0 1 0 4 0 0 0 0 0 2 1 2 1 0 0 0 0 0 14 0 1338.6317 Q8IYI6 Q8IYI6 135 148 EXOC8 Exocyst complex component 8 yes yes 2 0.0039106 130.1 By MS/MS 5 0 1 1 1328400 1328400 0 5526 1881 5728 13552 9683 9683 1 54601 0 GQATDIAIQAEEIMK PNSRIMIHQPSGGARGQATDIAIQAEEIMK GQATDIAIQAEEIMKLKKQLYNIYAKHTKQ R G Q M K L 3 0 0 1 0 2 2 1 0 3 0 1 1 0 0 0 1 0 0 0 0 0 15 0 1616.808 Q16740 Q16740 186 200 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 2 1.1815E-20 220.4 By MS/MS 8 0 1 1 1222200 1222200 0 5527 1545 5729 13553 9684 9684 1171 1 80628 0 GQCDLELINVCNENSLFK CEKRDPHLACVAYERGQCDLELINVCNENS DLELINVCNENSLFKSLSRYLVRRKDPELW R G Q F K S 0 0 3 1 2 1 2 1 0 1 3 1 0 1 0 1 0 0 0 1 0 0 18 0 2151.9929 Q00610 Q00610 924 941 CLTC Clathrin heavy chain 1 yes yes 2 0.016156 73.834 By MS/MS 3.5 0.5 1 1 2 305010 305010 0 5528 1235 5730 13554;13555 9685 9685 1 8119.3 0 GQDGIGSKAEK QKVKKTAEAGGVTGKGQDGIGSKAEKTLGD VTGKGQDGIGSKAEKTLGDFAAEYAKSNRS K G Q E K T 1 0 0 1 0 1 1 3 0 1 0 2 0 0 0 1 0 0 0 0 0 0 11 1 1088.5462 P09874 P09874 98 108 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.043382 104.07 By MS/MS By matching 3 0.816 1 1 1 1 2 429570 301710 127860 5529 521 5731 13556;13557;13558 9686 9686 1 8236.3 117690 GQDIEYIEIR EINKIIRDLWRSTYRGQDIEYIEIRSDADE RSTYRGQDIEYIEIRSDADENVSASDKRRN R G Q I R S 0 1 0 1 0 1 2 1 0 3 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1234.6194 Q92878 Q92878 1157 1166 RAD50 DNA repair protein RAD50 yes yes 2 0.0064782 113.63 By MS/MS 3 0 1 1 997060 997060 0 5530 2083 5732 13559 9687 9687 1 26028 0 GQDIFIIQTIPR ETNGETRVEIKESVRGQDIFIIQTIPRDVN SVRGQDIFIIQTIPRDVNTAVMELLIMAYA R G Q P R D 0 1 0 1 0 2 0 1 0 4 0 0 0 1 1 0 1 0 0 0 0 0 12 0 1399.7823 Q14558 Q14558 57 68 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 2 0.00023322 151.1 By MS/MS 7 0 1 1 1038400 1038400 0 5531 1435 5733 13560 9688;9689 9688 2 18557 0 GQELIYAGMPITEVFK IRKPASFMTSICDERGQELIYAGMPITEVF QELIYAGMPITEVFKEEMGIGGVLGLLWFQ R G Q F K E 1 0 0 0 0 1 2 2 0 2 1 1 1 1 1 0 1 0 1 1 0 0 16 0 1794.9226 P53396 P53396 849 864 ACLY ATP-citrate synthase yes yes 2 7.2715E-15 203.85 By MS/MS 3.67 0.471 1 2 3 784070 784070 0 5532 1001 5734;5735 13561;13562;13563 9690;9691 9690 758 2 21370 0 GQENQLVALIPYSDQR SVTCPTCQGTGRIPRGQENQLVALIPYSDQ QENQLVALIPYSDQRLRPRRTKLYVMASVF R G Q Q R L 1 1 1 1 0 3 1 1 0 1 2 0 0 0 1 1 0 0 1 1 0 0 16 0 1829.9272 Q9NUM4 Q9NUM4 73 88 TMEM106B Transmembrane protein 106B yes yes 2 0.0086188 96.135 By MS/MS 3.4 2.06 1 1 1 1 1 5 794440 794440 0 5533 2639 5736 13564;13565;13566;13567;13568 9692;9693 9693 2 20997 0 GQFSTDELVAEVEK DCSEDVIKNLILVVRGQFSTDELVAEVEKR RGQFSTDELVAEVEKRNRLKLLLPWLEARI R G Q E K R 1 0 0 1 0 1 3 1 0 0 1 1 0 1 0 1 1 0 0 2 0 0 14 0 1550.7464 Q00610;P53675 Q00610 838 851 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.0023383 115.34 By MS/MS 1.5 0.5 1 1 2 173620 173620 0 5534 1235 5737 13569;13570 9694 9694 1 8561.8 0 GQGSVSASVTEGQQNEQ ESVDGQWVCISDVNKGQGSVSASVTEGQQN GSVSASVTEGQQNEQ_______________ K G Q E Q - 1 0 1 0 0 4 2 3 0 0 0 0 0 0 0 3 1 0 0 2 0 0 17 0 1704.7551 P55735 P55735 306 322 SEC13 Protein SEC13 homolog yes yes 2 4.1465E-19 211.82 By MS/MS 8 0 1 1 973790 973790 0 5535 1033 5738 13571 9695 9695 1 64241 0 GQGTEFNLTFR QWPYGDICSISPVGKGQGTEFNLTFRKGSG PVGKGQGTEFNLTFRKGSGKKSETLKFSTE K G Q F R K 0 1 1 0 0 1 1 2 0 0 1 0 0 2 0 0 2 0 0 0 0 0 11 0 1268.6149 O75165 O75165 63 73 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0008397 135.8 By MS/MS 2 0 1 1 197180 197180 0 5536 287 5739 13572 9696 9696 1 9800.9 0 GQHSSGSGQSPGHGQR SYGQHESASRHSSGRGQHSSGSGQSPGHGQ QHSSGSGQSPGHGQRGSGSGQSPSSGQHGT R G Q Q R G 0 1 0 0 0 3 0 5 2 0 0 0 0 0 1 4 0 0 0 0 0 0 16 0 1562.6934 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 414 429 HRNR Hornerin yes no 2 0.038431 70.68 By matching By MS/MS 3.33 1.49 1 1 1 1 2 1 5 87255 25948 61307 + 5537 64 5740 13573;13574;13575;13576;13577;13578 9697 9697 1 1066.6 117570 GQHWLLDGFPR HVITRLMMSELENRRGQHWLLDGFPRTLGQ ENRRGQHWLLDGFPRTLGQAEALDKICEVD R G Q P R T 0 1 0 1 0 1 0 2 1 0 2 0 0 1 1 0 0 1 0 0 0 0 11 0 1324.6677 P27144 P27144 82 92 AK4 Adenylate kinase 4, mitochondrial yes yes 3 0.0026248 119.27 By MS/MS 8 0 1 1 307280 307280 0 5538 702 5741 13579 9698 9698 1 20271 0 GQKCEFQDAYVLLSEK FDRGYISPYFINTSKGQKCEFQDAYVLLSE QKCEFQDAYVLLSEKKISSIQSIVPALEIA K G Q E K K 1 0 0 1 1 2 2 1 0 0 2 2 0 1 0 1 0 0 1 1 0 0 16 1 1913.9193 P10809 P10809 234 249 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 6.9776E-05 139.6 By MS/MS 6.75 0.829 2 1 1 4 52558000 52558000 0 5539 544 5742 13580;13581;13582;13583 9699;9700 9700 2 421840 0 GQKCEFQDAYVLLSEKK FDRGYISPYFINTSKGQKCEFQDAYVLLSE KCEFQDAYVLLSEKKISSIQSIVPALEIAN K G Q K K I 1 0 0 1 1 2 2 1 0 0 2 3 0 1 0 1 0 0 1 1 0 0 17 2 2042.0143 P10809 P10809 234 250 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3;4 0.00010506 133.32 By MS/MS 6 0 2 2 74904000 74904000 0 5540 544 5743 13584;13585 9701;9702 9701 2 584100 0 GQLENAEQLFK ITYTYDLMANLAFIRGQLENAEQLFKATMS AFIRGQLENAEQLFKATMSYLLGGGMKQED R G Q F K A 1 0 1 0 0 2 2 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 11 0 1275.6459 Q6DKK2 Q6DKK2 150 160 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 3.7194E-05 185.96 By MS/MS 8 0 1 1 2406300 2406300 0 5541 1679 5744 13586 9703 9703 1 158740 0 GQMQKPFEDASFALR CSSAKARGDLGAFSRGQMQKPFEDASFALR GQMQKPFEDASFALRTGEMSGPVFTDSGIH R G Q L R T 2 1 0 1 0 2 1 1 0 0 1 1 1 2 1 1 0 0 0 0 0 0 15 1 1723.8352 Q13526 Q13526 128 142 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 3 0.015469 73.758 By MS/MS 10 0 1 1 1277800 1277800 0 5542 1378 5745 13587 9704 9704 1070 1 1358100 0 GQPAIIDGELYNEVK MVVDIQRRHLRVGLKGQPAIIDGELYNEVK GQPAIIDGELYNEVKVEESSWLIEDGKVVT K G Q V K V 1 0 1 1 0 1 2 2 0 2 1 1 0 0 1 0 0 0 1 1 0 0 15 0 1644.8359 Q9Y266 Q9Y266 213 227 NUDC Nuclear migration protein nudC yes yes 2 0.00057041 121.42 By MS/MS 7 0 1 1 1767000 1767000 0 5543 2871 5746 13588 9705 9705 1 31577 0 GQPDVVVKEDEEYK GKFGNEVIPVTVTVKGQPDVVVKEDEEYKR KGQPDVVVKEDEEYKRVDFSKVPKLKTVFQ K G Q Y K R 0 0 0 2 0 1 3 1 0 0 0 2 0 0 1 0 0 0 1 3 0 0 14 1 1633.7835 P24752 P24752 244 257 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.022197 112.5 By MS/MS 7 0 1 1 1474400 1474400 0 5544 680 5747 13589 9706 9706 1 26349 0 GQPDVVVKEDEEYKR GKFGNEVIPVTVTVKGQPDVVVKEDEEYKR GQPDVVVKEDEEYKRVDFSKVPKLKTVFQK K G Q K R V 0 1 0 2 0 1 3 1 0 0 0 2 0 0 1 0 0 0 1 3 0 0 15 2 1789.8846 P24752 P24752 244 258 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 4.1649E-14 212.1 By MS/MS 7 0 1 1 3009200 3009200 0 5545 680 5748 13590 9707 9707 1 53775 0 GQPLPPDLLQQAK MKRIIAHAQLLEQHRGQPLPPDLLQQAKCL HRGQPLPPDLLQQAKCLGFSDKQIALAVLS R G Q A K C 1 0 0 1 0 3 0 1 0 0 3 1 0 0 3 0 0 0 0 0 0 0 13 0 1403.7773 P27708 P27708 855 867 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.041796 74.962 By MS/MS 2.5 1.12 1 1 1 1 4 3101200 3101200 0 5546 709 5749 13591;13592;13593;13594 9708 9708 1 138120 0 GQQELLYVVPFVAK TDLDVKSLLLEAYVKGQQELLYVVPFVAKV KGQQELLYVVPFVAKVLESSIRSVVFRPPN K G Q A K V 1 0 0 0 0 2 1 1 0 0 2 1 0 1 1 0 0 0 1 3 0 0 14 0 1589.8817 A5YKK6 A5YKK6 1228 1241 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0021283 116.24 By MS/MS 2.5 0.5 1 1 2 174820 174820 0 5547 19 5750 13595;13596 9709;9710;9711 9710 3 6472.7 0 GQQQVFK LKTILKDATLTALDRGQQQVFKGLNDKVKK ATLTALDRGQQQVFKGLNDKVKKKALTSFE R G Q F K G 0 0 0 0 0 3 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 7 0 833.43955 P40939 P40939 400 406 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.040735 109.7 By MS/MS By MS/MS 4 1.41 1 2 2 1 5831100 5798400 32739 5548 835 5751 13597;13598;13599 9712;9713 9713 2 238340 96875 GQRPETLHER STFLFEDFSKASGFKGQRPETLHERLTLVS ASGFKGQRPETLHERLTLVSVYAPYLLIPF K G Q E R L 0 2 0 0 0 1 2 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 10 1 1221.6214 Q5BJF2 Q5BJF2 131 140 TMEM97 Transmembrane protein 97 yes yes 3 0.012038 96.171 By MS/MS 10 0 1 1 100980 100980 0 5549 1598 5752 13600 9714 9714 1 107330 0 GQSDIAITK KTPALKYQQLFEDIRGQSDIAITKDMFEEA LFEDIRGQSDIAITKDMFEEALRALADDDF R G Q T K D 1 0 0 1 0 1 0 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 9 0 931.49746 P33991 P33991 829 837 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.0093817 109.83 By MS/MS 3.5 0.5 1 1 2 1363400 1363400 0 5550 773 5753 13601;13602 9715;9716 9716 2 37066 0 GQSEDPGSLLSLFR FPDIPGAVSANMTVKGQSEDPGSLLSLFRR KGQSEDPGSLLSLFRRLSDQRSKERSLLHG K G Q F R R 0 1 0 1 0 1 1 2 0 0 3 0 0 1 1 3 0 0 0 0 0 0 14 0 1504.7522 P08195 P08195 511 524 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 4.7698E-12 201.38 By MS/MS 4.5 1.12 1 1 1 1 4 5631800 5631800 0 5551 499 5754 13603;13604;13605;13606 9717;9718;9719;9720 9718 4 139890 0 GQTGGDVNVEMDAAPGVDLSR AYLRKNHEEEMLALRGQTGGDVNVEMDAAP VNVEMDAAPGVDLSRILNEMRDQYEQMAEK R G Q S R I 2 1 1 3 0 1 1 4 0 0 1 0 1 0 1 1 1 0 0 3 0 0 21 0 2086.9589 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P08779 264 284 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.00042995 100.11 By matching By MS/MS 4.11 1.79 1 1 1 2 2 1 1 2 7 1189900 554840 635060 + 5552 47 5755 13607;13608;13609;13610;13611;13612;13613;13614;13615 9721;9722;9723;9724;9725;9726;9727;9728 9726 30 8 20634 1696900 GQTHTLEDFQR CAGIAVASKTYNLKKGQTHTLEDFQRVLDV NLKKGQTHTLEDFQRVLDVNLMGTFNVIRL K G Q Q R V 0 1 0 1 0 2 1 1 1 0 1 0 0 1 0 0 2 0 0 0 0 0 11 0 1330.6266 Q99714 Q99714 106 116 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2;3 5.5025E-08 192.44 By MS/MS 8.4 0.49 3 2 5 5482600 5482600 0 5553 2285 5756 13616;13617;13618;13619;13620 9729;9730;9731 9730 3 998950 0 GQTLTLTQQQR AYEQVIKYCTTYQSKGQTLTLTQQQRDVYQ YQSKGQTLTLTQQQRDVYQQEKARMGSAGL K G Q Q R D 0 1 0 0 0 4 0 1 0 0 2 0 0 0 0 0 3 0 0 0 0 0 11 0 1272.6786 P98194 P98194 497 507 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 2 0.0034497 134.57 By MS/MS 1 0 1 1 191600 191600 0 5554 1226 5757 13621 9732 9732 1 9361.2 0 GQVEYLLK EEYVVEKVLDRRVVKGQVEYLLKWKGFSEE LDRRVVKGQVEYLLKWKGFSEEHNTWEPEK K G Q L K W 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 1 1 0 0 8 0 948.52803 P45973 P45973 33 40 CBX5 Chromobox protein homolog 5 yes yes 2 0.013709 127.46 By MS/MS 9 0 1 1 660590 660590 0 5555 872 5758 13622 9733 9733 1 379120 0 GQVGGDVNVEMDAAPGVDLSR AYLKKNHEEEMNALRGQVGGDVNVEMDAAP VNVEMDAAPGVDLSRILNEMRDQYEKMAEK R G Q S R I 2 1 1 3 0 1 1 4 0 0 1 0 1 0 1 1 0 0 0 4 0 0 21 0 2084.9797 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 262 282 KRT14 Keratin, type I cytoskeletal 14 yes no 2 4.741E-26 213.71 By MS/MS By MS/MS 4.6 2.24 1 1 1 2 2 1 1 1 3 7 2368500 1481700 886780 + 5556 35 5759 13623;13624;13625;13626;13627;13628;13629;13630;13631;13632 9734;9735;9736;9737;9738;9739;9740;9741 9741 15 8 593640 1887100 GQVKEEGINK APRGKSGAALSKKSKGQVKEEGINKSEKRM SKKSKGQVKEEGINKSEKRMKLTLKGGAAV K G Q N K S 0 0 1 0 0 1 2 2 0 1 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1100.5826 P09874 P09874 509 518 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0026935 150.27 By MS/MS 4 0 1 1 400500 400500 0 5557 521 5760 13633 9742 9742 1 10933 0 GQVKEEGINKSEK APRGKSGAALSKKSKGQVKEEGINKSEKRM SKGQVKEEGINKSEKRMKLTLKGGAAVDPD K G Q E K R 0 0 1 0 0 1 3 2 0 1 0 3 0 0 0 1 0 0 0 1 0 0 13 2 1444.7522 P09874 P09874 509 521 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 1.13E-16 235.49 By MS/MS By matching 4.25 0.433 3 1 3 1 2327200 2312900 14280 5558 521 5761 13634;13635;13636;13637 9743;9744 9744 2 64296 29838 GQVPPLVTTNFLVK DRNNRGTEPFVTGVRGQVPPLVTTNFLVKD RGQVPPLVTTNFLVKDQGNASPRYIRCTSY R G Q V K D 0 0 1 0 0 1 0 1 0 0 2 1 0 1 2 0 2 0 0 3 0 0 14 0 1511.8712 P53992 P53992 351 364 SEC24C Protein transport protein Sec24C yes yes 2 0.01495 86.911 By MS/MS 3.5 0.5 1 1 2 186790 186790 0 5559 1009 5762 13638;13639 9745 9745 1 5067.7 0 GQVSEGGQLR VRIVKSESGYGFNVRGQVSEGGQLRSINGE GFNVRGQVSEGGQLRSINGELYAPLQHVSA R G Q L R S 0 1 0 0 0 2 1 3 0 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1029.5203 Q96L92 Q96L92 59 68 SNX27 Sorting nexin-27 yes yes 2 0.001078 120.27 By MS/MS By matching 6 0 2 1 1 1464500 1452100 12416 5560 2224 5763 13640;13641 9746 9746 1 11323 38079 GQVSESEDSITK PPKLRRRTFSLTEVRGQVSESEDSITKQIE EVRGQVSESEDSITKQIESLETEMEFRSAQ R G Q T K Q 0 0 0 1 0 1 2 1 0 1 0 1 0 0 0 3 1 0 0 1 0 0 12 0 1278.5939 O95239 O95239 807 818 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.00013987 155.48 By MS/MS 3 0 1 1 325400 325400 0 5561 378 5764 13642 9747 9747 1 8494.7 0 GQYNTYPIK QGFRVDLPIKSARYRGQYNTYPIKLFYTSN KSARYRGQYNTYPIKLFYTSNIPIILQSAL R G Q I K L 0 0 1 0 0 1 0 1 0 1 0 1 0 0 1 0 1 0 2 0 0 0 9 0 1082.5397 P61619 P61619 274 282 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 2 0.0028304 120.87 By MS/MS 1.5 0.5 1 1 2 624880 624880 0 5562 1103 5765 13643;13644 9748;9749 9748 2 30743 0 GRDIVVLGVEKK AQEAVKKGSTAVGVRGRDIVVLGVEKKSVA GVRGRDIVVLGVEKKSVAKLQDERTVRKIC R G R K K S 0 1 0 1 0 0 1 2 0 1 1 2 0 0 0 0 0 0 0 3 0 0 12 2 1311.7874 O14818 O14818 37 48 PSMA7 Proteasome subunit alpha type-7 yes yes 2;3 0.04864 101.89 By MS/MS 8 0 2 2 4536400 4536400 0 5563 129 5766 13645;13646 9750;9751 9751 2 299260 0 GRDLGAYLR FLKLCEEWPVDETKRGRDLGAYLRQRVAQA VDETKRGRDLGAYLRQRVAQAFREGENTQV R G R L R Q 1 2 0 1 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 9 1 1019.5512 Q9BRT2 Q9BRT2 24 32 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 2 0.046253 101.54 By MS/MS 10 0 1 1 0 0 0 5564 2329 5767 13647 9752 9752 1 0 0 GREFGVTTGR PTEQDNEIGELLQTRGREFGVTTGRKRRCG LLQTRGREFGVTTGRKRRCGWLDLVLLKYA R G R G R K 0 2 0 0 0 0 1 3 0 0 0 0 0 1 0 0 2 0 0 1 0 0 10 1 1078.552 P30520 P30520 325 334 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2;3 0.0073712 122.96 By MS/MS 5 2.16 1 1 1 3 5211400 5211400 0 5565 742 5768 13648;13649;13650 9753;9754 9754 2 111750 0 GREPEARPK DFQGITPGAQGPSSRGREPEARPKRELRER QGPSSRGREPEARPKRELREREGPSLGPPP R G R P K R 1 2 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 9 2 1038.557 O75150 O75150 603 611 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 3 0.0051184 94.309 By MS/MS 3 0 1 1 141360 141360 0 5566 283 5769 13651 9755 9755 1 3690.2 0 GRGDASGLKR AIYLWSRQQRRREARGRGDASGLKRNSERK RREARGRGDASGLKRNSERKTPEGRASPAP R G R K R N 1 2 0 1 0 0 0 3 0 0 1 1 0 0 0 1 0 0 0 0 0 0 10 2 1015.5523 O94826 O94826 70 79 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3 0.01242 91.549 By MS/MS 5 0 1 1 839940 839940 0 5567 353 5770 13652 9756 9756 1 34525 0 GRIPVNTR KNLGLEELGIELDPRGRIPVNTRFQTKIPN GIELDPRGRIPVNTRFQTKIPNIYAIGDVV R G R T R F 0 2 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 1 0 0 8 1 911.5301 P09622 P09622 335 342 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 0.039586 135.77 By MS/MS By matching 6 0 2 1 1 4698300 4673900 24434 5568 518 5771 13653;13654 9757 9757 1 36447 74937 GRLDSELR INNLRRQLDSIVGERGRLDSELRNMQDLVE DSIVGERGRLDSELRNMQDLVEDFKNKYED R G R L R N 0 2 0 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 1 944.50394 CON__P02538;P02538;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647 CON__P13647 238 245 KRT6A;KRT6C;KRT6B;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5 no no 3 0.043 67.897 By MS/MS 6 0 1 1 0 0 0 + 5569 50;36;53;449;61 5772 13655 9758 9758 1 0 0 GRPAVCQPQGR NYVPCPAPQPVQMYRGRPAVCQPQGRFSTQ QMYRGRPAVCQPQGRFSTQCQYQGSYSSCG R G R G R F 1 2 0 0 1 2 0 2 0 0 0 0 0 0 2 0 0 0 0 1 0 0 11 1 1224.6146 Q5T749 Q5T749 167 177 KPRP Keratinocyte proline-rich protein yes yes 3 0.033921 80.24 By MS/MS 6.83 2.11 1 1 1 1 1 1 6 184770 0 184770 5570 1631 5773 13656;13657;13658;13659;13660;13661 9759;9760 9759 2 0 906830 GRPLAEESEQER LYNGLHRPLLGRLSRGRPLAEESEQERLLG LSRGRPLAEESEQERLLGGTRTPINDAS__ R G R E R L 1 2 0 0 0 1 4 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1399.6692 Q8N357 Q8N357 347 358 SLC35F6 Solute carrier family 35 member F6 yes yes 2;3 0.00088174 152.38 By MS/MS 1.5 0.5 2 2 4 1290200 1290200 0 5571 1907 5774 13662;13663;13664;13665 9761;9762;9763 9761 3 63301 0 GRSDYDGIGSR FSDRGSGSRGRFDDRGRSDYDGIGSRGDRS FDDRGRSDYDGIGSRGDRSGFGKFERGGNS R G R S R G 0 2 0 2 0 0 0 3 0 1 0 0 0 0 0 2 0 0 1 0 0 0 11 1 1181.5425 O00571 O00571 100 110 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.01171 145.46 By MS/MS By matching 5 0 2 1 1 910540 903360 7176.1 5572 105 5775 13666;13667 9764 9764 1 37132 21234 GSAAAVIVYDITK AGQERFHSLAPMYYRGSAAAVIVYDITKQD YRGSAAAVIVYDITKQDSFYTLKKWVKELK R G S T K Q 3 0 0 1 0 0 0 1 0 2 0 1 0 0 0 1 1 0 1 2 0 0 13 0 1306.7133 Q13636 Q13636 77 89 RAB31 Ras-related protein Rab-31 yes yes 2 0.0034529 111.86 By MS/MS 9 0 1 1 61247 61247 0 5573 1393 5776 13668 9765 9765 1 35150 0 GSAALGGALALAER SLPTSSVPETRGRNKGSAALGGALALAERS KGSAALGGALALAERSSREGSSQRMPRQPS K G S E R S 5 1 0 0 0 0 1 3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 14 0 1255.6884 Q6NZ67 Q6NZ67 111 124 MZT2B Mitotic-spindle organizing protein 2B yes yes 2 6.6533E-12 196.24 By MS/MS 9 0 1 1 596970 596970 0 5574 1696 5777 13669 9766 9766 1 342610 0 GSAITGPVAK EDNAGVIVNNKGEMKGSAITGPVAKECADL KGEMKGSAITGPVAKECADLWPRIASNAGS K G S A K E 2 0 0 0 0 0 0 2 0 1 0 1 0 0 1 1 1 0 0 1 0 0 10 0 899.50763 P62829 P62829 114 123 RPL23 60S ribosomal protein L23 yes yes 2 0.0023696 116.05 By MS/MS By matching 10 0 2 1 1 4501300 4425400 75877 5575 1147 5778 13670;13671 9767 9767 1 4703800 1946200 GSCGIGGGIGGGSSR MTTCSRQFTSSSSMKGSCGIGGGIGGGSSR GSCGIGGGIGGGSSRISSVLAGGSCRAPST K G S S R I 0 1 0 0 1 0 0 8 0 2 0 0 0 0 0 3 0 0 0 0 0 0 15 0 1277.5782 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 16 30 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 9.7212E-10 180.24 By MS/MS By MS/MS 4.42 2.72 2 1 2 2 2 1 1 1 6 6 7101800 4667100 2434700 + 5576 35;47 5779 13672;13673;13674;13675;13676;13677;13678;13679;13680;13681;13682;13683 9768;9769;9770;9771;9772;9773;9774;9775;9776;9777;9778;9779 9777 12 425050 4803400 GSDEPPVFLEIHYK WIEEQAMGSFLSVAKGSDEPPVFLEIHYKG KGSDEPPVFLEIHYKGSPNANEPPLVFVGK K G S Y K G 0 0 0 1 0 0 2 1 1 1 1 1 0 1 2 1 0 0 1 1 0 0 14 0 1629.8039 P28838 P28838 254 267 LAP3 Cytosol aminopeptidase yes yes 3 0.029234 67.997 By MS/MS 6.5 0.5 1 1 2 4009900 4009900 0 5577 722 5780 13684;13685 9780 9780 1 33618 0 GSDFDCELR LESDAVECLNYQHYKGSDFDCELRLLIHQS NYQHYKGSDFDCELRLLIHQSLAGGIIGVK K G S L R L 0 1 0 2 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1097.4448 P61978 P61978 140 148 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 0.0016822 133.23 By MS/MS 6 0 1 1 2750500 2750500 0 5578 1110 5781 13686 9781 9781 1 21449 0 GSDIIIVGR LGQQYNSPQEVIGKRGSDIIIVGRGIISAA EVIGKRGSDIIIVGRGIISAADRLEAAEMY R G S G R G 0 1 0 1 0 0 0 2 0 3 0 0 0 0 0 1 0 0 0 1 0 0 9 0 928.53418 P11172 P11172 443 451 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 0.0022087 127.56 By MS/MS 6.5 0.5 1 1 2 4057900 4057900 0 5579 548 5782 13687;13688 9782 9782 1 33788 0 GSDQNASLYWLAR EEHYNCISALHKSMRGSDQNASLYWLARML MRGSDQNASLYWLARMLEGGEDPLYVARRL R G S A R M 2 1 1 1 0 1 0 1 0 0 2 0 0 0 0 2 0 1 1 0 0 0 13 0 1479.7106 Q96S55 Q96S55 512 524 WRNIP1 ATPase WRNIP1 yes yes 2 6.8292E-12 206.36 By MS/MS 5 0 1 1 404730 404730 0 5580 2253 5783 13689 9783 9783 1 16636 0 GSDRDGGADGMSAECECNIK FLDREQYGQYALAVRGSDRDGGADGMSAEC GGADGMSAECECNIKILDVNDNIPYMEQSS R G S I K I 2 1 1 3 2 0 2 4 0 1 0 1 1 0 0 2 0 0 0 0 0 0 20 1 2127.8256 Q02413 Q02413 239 258 DSG1 Desmoglein-1 yes yes 3 0.039073 52.498 By MS/MS 5.5 0.5 1 1 2 66762 0 66762 5581 1253 5784 13690;13691 9784 9784 1013 1 0 198670 GSELEITLTR SPSDKVLIQEKTQLKGSELEITLTRGSSLP KTQLKGSELEITLTRGSSLPGPACAYVNLN K G S T R G 0 1 0 0 0 0 2 1 0 1 2 0 0 0 0 1 2 0 0 0 0 0 10 0 1117.5979 P41252 P41252 1062 1071 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.4382E-10 203.29 By MS/MS 3 0 1 1 4478000 4478000 0 5582 840 5785 13692 9785 9785 1 116900 0 GSELPVLER GFYHDFFLGKERTIRGSELPVLERICQELT KERTIRGSELPVLERICQELTAAARPFRRL R G S E R I 0 1 0 0 0 0 2 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 9 0 998.53966 Q9BW92 Q9BW92 175 183 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.043156 83.647 By MS/MS 5 0 1 1 7793700 7793700 0 5583 2391 5786 13693 9786 9786 1 320350 0 GSELQLPFQACLK PLEVHLLDFPNIVIKGSELQLPFQACLKVE IKGSELQLPFQACLKVEKFGDLILKATEPQ K G S L K V 1 0 0 0 1 2 1 1 0 0 3 1 0 1 1 1 0 0 0 0 0 0 13 0 1489.7599 Q6P2Q9 Q6P2Q9 1886 1898 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 1.93E-05 169.76 By MS/MS 2 0 1 1 267550 267550 0 5584 1706 5787 13694 9787 9787 1 13299 0 GSETPGATPGSK HTPSLRWDETPGRAKGSETPGATPGSKIWD RAKGSETPGATPGSKIWDPTPSHTPAGAAT K G S S K I 1 0 0 0 0 0 1 3 0 0 0 1 0 0 2 2 2 0 0 0 0 0 12 0 1087.5146 O75533 O75533 241 252 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.021802 83.869 By MS/MS 3 0 1 1 430930 430930 0 5585 315 5788 13695 9788 9788 1 11249 0 GSEWLVSTAK CVVDDHHMGISHVLRGSEWLVSTAKHLLLY SHVLRGSEWLVSTAKHLLLYQALGWQPPHF R G S A K H 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 2 1 1 0 1 0 0 10 0 1076.5502 Q5JPH6 Q5JPH6 247 256 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.00016083 158.76 By MS/MS 6 0 1 1 6565700 6565700 0 5586 1604 5789 13696 9789 9789 1 51200 0 GSFADLGLEPR RAQQEAPAVRKLSSKGSFADLGLEPRVLHA LSSKGSFADLGLEPRVLHALQEAAPEVVQP K G S P R V 1 1 0 1 0 0 1 2 0 0 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1160.5826 Q9NUL7 Q9NUL7 126 136 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 1.674E-05 174.41 By MS/MS 5.5 0.5 1 1 2 5560800 5560800 0 5587 2638 5790 13697;13698 9790 9790 1 47405 0 GSFSEQGINEFLR MAAINARKMKFALLKGSFSEQGINEFLREL LKGSFSEQGINEFLRELSFGRGSTAPVGGG K G S L R E 0 1 1 0 0 1 2 2 0 1 1 0 0 2 0 2 0 0 0 0 0 0 13 0 1482.7103 Q15084 Q15084 374 386 PDIA6 Protein disulfide-isomerase A6 yes yes 2 7.2399E-35 262.07 By MS/MS 7 0.816 1 1 1 3 19655000 19655000 0 5588 1478 5791 13699;13700;13701 9791;9792 9792 2 166670 0 GSFSSTAAQDAQGQR TCCWWPQGSQGKTLRGSFSSTAAQDAQGQR GSFSSTAAQDAQGQRIGHFEFHGDHALLCV R G S Q R I 3 1 0 1 0 3 0 2 0 0 0 0 0 1 0 3 1 0 0 0 0 0 15 0 1509.6808 Q86V85 Q86V85 27 41 GPR180 Integral membrane protein GPR180 yes yes 2 7.3427E-10 225.79 By MS/MS 2 0.816 1 1 1 3 1637500 1637500 0 5589 1826 5792 13702;13703;13704 9793;9794 9794 2 74331 0 GSGCSCTAPALSGPVAR LESDSASPGVSDHGRGSGCSCTAPALSGPV GCSCTAPALSGPVARTIYYIAAELVRLVGS R G S A R T 3 1 0 0 2 0 0 3 0 0 1 0 0 0 2 3 1 0 0 1 0 0 17 0 1646.7505 Q5TH69 Q5TH69 304 320 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 0.011145 89.013 By MS/MS 2 0 1 1 190930 190930 0 5590 1642 5793 13705 9795 9795 1 9490.4 0 GSGDVCGVLALAPGTNAGDGAR LPPPGGLGGPWVAVRGSGDVCGVLALAPGT VLALAPGTNAGDGARVTRLSVSRWHRRRGV R G S A R V 4 1 1 2 1 0 0 6 0 0 2 0 0 0 1 1 1 0 0 2 0 0 22 0 2013.9538 Q8WUY8 Q8WUY8 103 124 NAT14 N-acetyltransferase 14 yes yes 2 5.883E-14 169.15 By MS/MS 9 0 1 1 2929500 2929500 0 5591 2021 5794 13706 9796;9797 9797 2 1681300 0 GSGEGQGQILQR LADYFVLVAFGPHPRGSGEGQGQILQRFPE HPRGSGEGQGQILQRFPEKDWEDNPFPQGI R G S Q R F 0 1 0 0 0 3 1 4 0 1 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1228.616 O95248 O95248 19 30 SBF1 Myotubularin-related protein 5 yes yes 2 6.5434E-05 162.64 By MS/MS 2 0 1 1 237390 237390 0 5592 379 5795 13707 9798 9798 1 11800 0 GSGGGSSGGSIGGR RGGSGGGGGGSSGGRGSGGGSSGGSIGGRG RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS R G S G R G 0 1 0 0 0 0 0 8 0 1 0 0 0 0 0 4 0 0 0 0 0 0 14 0 1091.4956 P04264;CON__P04264 P04264 603 616 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.9693E-26 247.96 By MS/MS By MS/MS 5.26 2.75 2 2 2 2 2 2 2 2 2 1 10 9 151060000 69360000 81699000 + 5593 450;45 5796 13708;13709;13710;13711;13712;13713;13714;13715;13716;13717;13718;13719;13720;13721;13722;13723;13724;13725;13726 9799;9800;9801;9802;9803;9804;9805;9806;9807;9808;9809;9810;9811;9812;9813;9814;9815;9816;9817;9818;9819;9820;9821;9822 9815 24 16692000 217730000 GSGGGSSGGSIGGRGSSSGGVK RGGSGGGGGGSSGGRGSGGGSSGGSIGGRG GGSIGGRGSSSGGVKSSGGSSSVKFVSTTY R G S V K S 0 1 0 0 0 0 0 11 0 1 0 1 0 0 0 7 0 0 0 1 0 0 22 1 1750.8194 P04264;CON__P04264 P04264 603 624 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.00023265 110.04 By matching By MS/MS 3.5 2.81 2 1 1 1 1 5 1 1180700 672770 507920 + 5594 450;45 5797 13727;13728;13729;13730;13731;13732 9823 9823 1 87769 507920 GSGGLGGACGGAGFGSR VSRSGFSSVSVSRSRGSGGLGGACGGAGFG GGLGGACGGAGFGSRSLYGLGGSKRISIGG R G S S R S 2 1 0 0 1 0 0 9 0 0 1 0 0 1 0 2 0 0 0 0 0 0 17 0 1423.6263 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 43 59 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 3.5484E-25 225.72 By MS/MS By MS/MS 6.2 2.93 1 1 1 2 1 1 1 2 2 8 5693700 3249700 2444000 + 5595 36;53;449 5798 13733;13734;13735;13736;13737;13738;13739;13740;13741;13742 9824;9825;9826;9827 9827 4 183390 7067700 GSGIFDESTPVQTR EPQNIPKRTNPPGGKGSGIFDESTPVQTRQ KGSGIFDESTPVQTRQHLNPPGGKTSDIFG K G S T R Q 0 1 0 1 0 1 1 2 0 1 0 0 0 1 1 2 2 0 0 1 0 0 14 0 1492.7158 Q9H910 Q9H910 68 81 HN1L Hematological and neurological expressed 1-like protein yes yes 2 8.0879E-07 176.18 By MS/MS 9 0 1 1 466170 466170 0 5596 2527 5799 13743 9828 9828 1 267540 0 GSGIQWDLR AEEALNYGFSGVMLRGSGIQWDLRKTQPYD SGVMLRGSGIQWDLRKTQPYDVYDQVEFDV R G S L R K 0 1 0 1 0 1 0 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 9 0 1030.5196 O75306 O75306 295 303 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.00040807 155.42 By MS/MS 6.5 0.5 1 1 2 3903800 3903800 0 5597 294 5800 13744;13745 9829 9829 1 65219 0 GSGIQWDLRK AEEALNYGFSGVMLRGSGIQWDLRKTQPYD GVMLRGSGIQWDLRKTQPYDVYDQVEFDVP R G S R K T 0 1 0 1 0 1 0 2 0 1 1 1 0 0 0 1 0 1 0 0 0 0 10 1 1158.6146 O75306 O75306 295 304 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 3 0.018669 96.665 By MS/MS 7 0 1 1 2325200 2325200 0 5598 294 5801 13746 9830 9830 1 41552 0 GSGNLEAIHIIK DHFTKLAVEAVLRLKGSGNLEAIHIIKKLG RLKGSGNLEAIHIIKKLGGSLADSYLDEGF K G S I K K 1 0 1 0 0 0 1 2 1 3 1 1 0 0 0 1 0 0 0 0 0 0 12 0 1250.6983 P78371 P78371 192 203 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.00025333 150.15 By MS/MS 6.5 0.5 2 2 4 99165000 99165000 0 5599 1195 5802 13747;13748;13749;13750 9831;9832 9831 2 794460 0 GSGNLEAIHIIKK DHFTKLAVEAVLRLKGSGNLEAIHIIKKLG LKGSGNLEAIHIIKKLGGSLADSYLDEGFL K G S K K L 1 0 1 0 0 0 1 2 1 3 1 2 0 0 0 1 0 0 0 0 0 0 13 1 1378.7932 P78371 P78371 192 204 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.00016482 161.19 By MS/MS 6.5 0.5 2 2 4 36321000 36321000 0 5600 1195 5803 13751;13752;13753;13754 9833;9834 9834 2 291630 0 GSGQGDSLYPVGYLDK ELSGPGGGSRGRSDRGSGQGDSLYPVGYLD SGQGDSLYPVGYLDKQVPDTSVQETDRILV R G S D K Q 0 0 0 2 0 1 0 4 0 0 2 1 0 0 1 2 0 0 2 1 0 0 16 0 1654.7839 Q5J8M3 Q5J8M3 35 50 EMC4 ER membrane protein complex subunit 4 yes yes 2 5.4807E-21 224.43 By MS/MS 9 0 1 1 776100 776100 0 5601 1603 5804 13755 9835 9835 1 445410 0 GSGSGQSPSSGQHGTGFGR QHSSGSGQSPGHGQRGSGSGQSPSSGQHGT GQSPSSGQHGTGFGRSSSSGPYVSGSGYSS R G S G R S 0 1 0 0 0 2 0 7 1 0 0 0 0 1 1 5 1 0 0 0 0 0 19 0 1746.767 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 430 448 HRNR Hornerin yes no 3 0.0029628 82.449 By matching By MS/MS 2.2 0.748 1 2 2 2 3 1281000 277900 1003100 + 5602 64 5805 13756;13757;13758;13759;13760 9836;9837;9838 9836 3 11024 1177500 GSGSGQSPSYGR RHGSGSGQSPGHGQRGSGSGQSPSYGRHGS GQRGSGSGQSPSYGRHGSGSGRSSSSGRHG R G S G R H 0 1 0 0 0 1 0 4 0 0 0 0 0 0 1 4 0 0 1 0 0 0 12 0 1138.5003 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 897 908 HRNR Hornerin yes no 2 0.0004881 139.15 By MS/MS By MS/MS 4.82 2.79 1 2 1 2 1 1 1 1 1 5 6 1882500 678050 1204400 + 5603 64 5806 13761;13762;13763;13764;13765;13766;13767;13768;13769;13770;13771 9839;9840;9841;9842;9843;9844;9845;9846 9841 8 210490 1796600 GSGSSQSSGYGR QHGASSGQSSSHGQHGSGSSQSSGYGRQGS GQHGSGSSQSSGYGRQGSGSGQSPGHGQRG H G S G R Q 0 1 0 0 0 1 0 4 0 0 0 0 0 0 0 5 0 0 1 0 0 0 12 0 1128.4796 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1106 1117 HRNR Hornerin yes no 2 0.00094809 133.91 By matching By MS/MS 2.8 1.33 1 1 2 1 1 4 284800 34347 250460 + 5604 64 5807 13772;13773;13774;13775;13776 9847;9848 9847 2 896.64 440610 GSGTASDDEFENLR EVANCCIRIALPAPRGSGTASDDEFENLRI RGSGTASDDEFENLRIKGPNAVQLVKTTPL R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 3.8879E-13 213.35 By MS/MS 1.5 0.5 1 1 2 1019400 1019400 0 5605 1803 5808 13777;13778 9849;9850 9849 2 49994 0 GSIDEVDKR VELLVMKALSVGLVKGSIDEVDKRVHMTWV SVGLVKGSIDEVDKRVHMTWVQPRVLDLQQ K G S K R V 0 1 0 2 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 9 1 1017.5091 Q9UNM6 Q9UNM6 322 330 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2;3 0.0098359 123.98 By MS/MS 7 0 2 2 12115000 12115000 0 5606 2845 5809 13779;13780 9851;9852 9851 2 216500 0 GSIIISPCVVCR GPFVMRSTCRRCGGRGSIIISPCVVCRGAG GGRGSIIISPCVVCRGAGQAKQKKRVMIPV R G S C R G 0 1 0 0 2 0 0 1 0 3 0 0 0 0 1 2 0 0 0 2 0 0 12 0 1359.7003 Q96EY1 Q96EY1 282 293 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.00091869 134.25 By MS/MS 8 0.816 1 1 1 3 9561500 9561500 0 5607 2169 5810 13781;13782;13783 9853 9853 1 241120 0 GSITISAEEIKDNR LTRPLVMKTGRPAGKGSITISAEEIKDNRV KGSITISAEEIKDNRVVLFEMEARKLDNKD K G S N R V 1 1 1 1 0 0 2 1 0 3 0 1 0 0 0 2 1 0 0 0 0 0 14 1 1531.7842 O75131 O75131 126 139 CPNE3 Copine-3 yes yes 2 0.024666 130.44 By MS/MS 6.5 0.5 1 1 2 5141600 5141600 0 5608 282 5811 13784;13785 9854 9854 1 43442 0 GSKDHNIR HEKAPAFRDYVAVARGSKDHNIRAQEPESG DYVAVARGSKDHNIRAQEPESGLSEETQVK R G S I R A 0 1 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 8 1 925.47298 P78527 P78527 4083 4090 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0066058 174.52 By MS/MS 2.5 1.12 2 2 2 2 8 2705600 2705600 0 5609 1197 5812 13786;13787;13788;13789;13790;13791;13792;13793 9855;9856;9857;9858 9858 4 116830 0 GSLASLDSLR PSDQYYWAPLAQHERGSLASLDSLRKGGPP AQHERGSLASLDSLRKGGPPPPNWRQPELP R G S L R K 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1017.5455 O60716 O60716 345 354 CTNND1 Catenin delta-1 yes yes 2 0.00072629 135.55 By MS/MS 4.5 0.5 1 1 2 1812100 1812100 0 5610 260 5813 13794;13795 9859 9859 1 52689 0 GSLESPATDVFGSTEEGEKR RWSTLVEDYGMELRKGSLESPATDVFGSTE PATDVFGSTEEGEKRWKDLKNRVVEHNIRI K G S K R W 1 1 0 1 0 0 4 3 0 0 1 1 0 1 1 3 2 0 0 1 0 0 20 1 2094.9706 O00232 O00232 331 350 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 8.6794E-24 202.92 By MS/MS 6 0 1 1 2858000 2858000 0 5611 81 5814 13796 9860 9860 1 22287 0 GSLGGGFSSGGFSGGSFSR GGGGGVSSLRISSSKGSLGGGFSSGGFSGG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 1706.7649 CON__P13645;P13645 CON__P13645 41 59 KRT10 Keratin, type I cytoskeletal 10 yes no 2 5.1119E-26 225.09 By MS/MS By MS/MS 5.67 2.81 1 2 2 2 2 2 1 2 2 2 8 10 35146000 24553000 10592000 + 5612 49 5815 13797;13798;13799;13800;13801;13802;13803;13804;13805;13806;13807;13808;13809;13810;13811;13812;13813;13814 9861;9862;9863;9864;9865;9866;9867;9868;9869;9870;9871;9872;9873;9874;9875;9876;9877;9878;9879 9877 19 4818100 58991000 GSLLFTAGPLEEER FAFLKKEVVGKDLLKGSLLFTAGPLEEERF KGSLLFTAGPLEEERFGFPAFSGISRLTWL K G S E R F 1 1 0 0 0 0 3 2 0 0 3 0 0 1 1 1 1 0 0 0 0 0 14 0 1517.7726 P53004 P53004 148 161 BLVRA Biliverdin reductase A yes yes 2 0.0032331 111.52 By MS/MS 7 0 1 1 331210 331210 0 5613 995 5816 13815 9880 9880 1 5918.8 0 GSLLQQSL LTSLYALYNNWEHMKGSLLQQSL_______ NNWEHMKGSLLQQSL_______________ K G S S L - 0 0 0 0 0 2 0 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 8 0 844.46543 O14925 O14925 202 209 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 2 8.1903E-20 262.97 By MS/MS 9.5 0.5 1 1 2 2191700 2191700 0 5614 133 5817 13816;13817 9881;9882 9881 2 1299500 0 GSLTAIK KGFRNSPVGVNHRLRGSLTAIKTRAPQLGG VGVNHRLRGSLTAIKTRAPQLGGSFAVWGG R G S I K T 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 7 0 688.41194 Q99595 Q99595 50 56 TIMM17A Mitochondrial import inner membrane translocase subunit Tim17-A yes yes 2 0.019236 128.48 By MS/MS 10 0 1 1 407700 407700 0 5615 2274 5818 13818 9883 9883 1 433340 0 GSLVDYLR EEKGGLYIVTEYMAKGSLVDYLRSRGRSVL VTEYMAKGSLVDYLRSRGRSVLGGDCLLKF K G S L R S 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 8 0 921.49198 P41240 P41240 272 279 CSK Tyrosine-protein kinase CSK yes yes 2 0.02399 101.6 By MS/MS 6.5 0.5 1 1 2 1151000 1151000 0 5616 839 5819 13819;13820 9884 9884 1 16194 0 GSMAGSTGVHDTVVNQLLSK HIIIFDEIDAICKQRGSMAGSTGVHDTVVN STGVHDTVVNQLLSKIDGVEQLNNILVIGM R G S S K I 1 0 1 1 0 1 0 3 1 0 2 1 1 0 0 3 2 0 0 3 0 0 20 0 1999.9997 P46459 P46459 338 357 NSF Vesicle-fusing ATPase yes yes 3 0.0078696 71.872 By MS/MS 5 0 1 1 1607200 1607200 0 5617 881 5820 13821 9885 9885 628 1 66063 0 GSNKLVIEEAER TGCASPGKTVTIVVRGSNKLVIEEAERSIH VVRGSNKLVIEEAERSIHDALCVIRCLVKK R G S E R S 1 1 1 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 12 1 1343.7045 P50991 P50991 392 403 CCT4 T-complex protein 1 subunit delta yes yes 2;3 6.348E-10 196.67 By MS/MS By matching 7.11 1.37 1 3 1 2 2 8 1 136310000 136280000 26025 5618 956 5821 13822;13823;13824;13825;13826;13827;13828;13829;13830 9886;9887;9888;9889;9890 9890 5 1765100 79815 GSNLDAPEPYR DLYPEHYRKYSDYIKGSNLDAPEPYRIGRI DYIKGSNLDAPEPYRIGRIKEIFCPKKSNG K G S Y R I 1 1 1 1 0 0 1 1 0 0 1 0 0 0 2 1 0 0 1 0 0 0 11 0 1217.5677 P26358 P26358 982 992 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 6.8047E-05 166.66 By MS/MS 2.5 0.5 1 1 2 1341700 1341700 0 5619 693 5822 13831;13832 9891;9892 9891 2 47915 0 GSNMDFREPTEEER GPPMGSRFRDGPPLRGSNMDFREPTEEERA RGSNMDFREPTEEERAQRPRLQLKPRTVAT R G S E R A 0 2 1 1 0 0 4 1 0 0 0 0 1 1 1 1 1 0 0 0 0 0 14 1 1695.7159 Q15056 Q15056 192 205 EIF4H Eukaryotic translation initiation factor 4H yes yes 3 0.0048497 93.649 By MS/MS 8 0 1 1 1189300 1189300 0 5620 1474 5823 13833 9893 9893 1 78456 0 GSNNVALGYDEGSIIVK LNYGMERVWCVASLRGSNNVALGYDEGSII NNVALGYDEGSIIVKLGREEPAMSMDANGK R G S V K L 1 0 2 1 0 0 1 3 0 2 1 1 0 0 0 2 0 0 1 2 0 0 17 0 1734.8788 P35606 P35606 282 298 COPB2 Coatomer subunit beta yes yes 2 3.9518E-33 234.83 By MS/MS 3 1.41 1 1 1 1 1 5 4933400 4933400 0 5621 795 5824 13834;13835;13836;13837;13838 9894;9895;9896;9897 9897 4 185910 0 GSNSLPLLR LLHAATYTKKVLDARGSNSLPLLRSVLDKL KVLDARGSNSLPLLRSVLDKLSANQQNILK R G S L R S 0 1 1 0 0 0 0 1 0 0 3 0 0 0 1 2 0 0 0 0 0 0 9 0 955.54508 P57088 P57088 135 143 TMEM33 Transmembrane protein 33 yes yes 2 0.0027128 122.13 By MS/MS 5.5 3.59 1 1 1 1 1 1 6 12065000 12065000 0 5622 1053 5825 13839;13840;13841;13842;13843;13844 9898;9899 9899 2 6270900 0 GSNTIASAAADK NIPALVRLLQAFLERGSNTIASAAADKIPG LERGSNTIASAAADKIPGLLGVFQKLIASK R G S D K I 4 0 1 1 0 0 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 0 12 0 1104.5411 P55060 P55060 715 726 CSE1L Exportin-2 yes yes 2 0.0006865 127.52 By MS/MS 4 0 1 1 617880 617880 0 5623 1025 5826 13845 9900 9900 0 16867 0 GSNTTSHLHQAVAK SVLQHVLGAGPHVKRGSNTTSHLHQAVAKA RGSNTTSHLHQAVAKATQQPFDVSAFNASY R G S A K A 2 0 1 0 0 1 0 1 2 0 1 1 0 0 0 2 2 0 0 1 0 0 14 0 1449.7324 P22695 P22695 302 315 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.00011503 146.16 By MS/MS 7 0 1 1 2457400 2457400 0 5624 662 5827 13846 9901 9901 1 43915 0 GSNWVPR SSRIRFMLQDVLDLRGSNWVPRRGDQGPKT LQDVLDLRGSNWVPRRGDQGPKTIDQIHKE R G S P R R 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 7 0 814.40859 Q04637 Q04637 987 993 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.040651 107.59 By MS/MS 2 0.816 1 1 1 3 6935400 6935400 0 5625 1264 5828 13847;13848;13849 9902 9902 1 326170 0 GSPCSEEAGTLR VKGKVAGALLRAIFKGSPCSEEAGTLRRRK IFKGSPCSEEAGTLRRRKIYTCCIQLVESG K G S L R R 1 1 0 0 1 0 2 2 0 0 1 0 0 0 1 2 1 0 0 0 0 0 12 0 1262.5561 Q9NVI1 Q9NVI1 53 64 FANCI Fanconi anemia group I protein yes yes 2 0.0043953 109.16 By MS/MS 3 0 1 1 612140 612140 0 5626 2654 5829 13850 9903 9903 1 15980 0 GSPDITCVFLNVER IFGKGNFEHLTEKIRGSPDITCVFLNVERM RGSPDITCVFLNVERMAAPTKKELEAAWGV R G S E R M 0 1 1 1 1 0 1 1 0 1 1 0 0 1 1 1 1 0 0 2 0 0 14 0 1605.7821 O43824 O43824 167 180 GTPBP6 Putative GTP-binding protein 6 yes yes 2 9.0446E-05 182.71 By MS/MS 5.5 0.5 1 1 2 3152000 3152000 0 5627 228 5830 13851;13852 9904 9904 1 25770 0 GSPEDKDSEIELLTAGKK NSVLEVEKSLVLAEKGSPEDKDSEIELLTA EDKDSEIELLTAGKKFRILATMNPGGDFGK K G S K K F 1 0 0 2 0 0 3 2 0 1 2 3 0 0 1 2 1 0 0 0 0 0 18 2 1915.9739 Q9NU22 Q9NU22 1497 1514 MDN1 Midasin yes yes 3 0.025335 80.609 By MS/MS 1 0 1 1 334380 334380 0 5628 2635 5831 13853 9905 9905 1 16337 0 GSPLGEVVEQGITR VQEKYVWNKRESTEKGSPLGEVVEQGITRV KGSPLGEVVEQGITRVRNATDAVGIVLKEL K G S T R V 0 1 0 0 0 1 2 3 0 1 1 0 0 0 1 1 1 0 0 2 0 0 14 0 1440.7573 P51398 P51398 219 232 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 1.9006E-12 234.24 By MS/MS 7.5 0.5 1 1 2 19529000 19529000 0 5629 963 5832 13854;13855 9906;9907 9906 2 380670 0 GSPLLIGVR FKSVHFPGQAVGTRRGSPLLIGVRSEHKLS AVGTRRGSPLLIGVRSEHKLSTDHIPILYR R G S V R S 0 1 0 0 0 0 0 2 0 1 2 0 0 0 1 1 0 0 0 1 0 0 9 0 910.56 Q06210;O94808 Q06210 204 212 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes no 2 0.02555 98.629 By MS/MS 5 0 1 1 1239400 1239400 0 5630 1274 5833 13856 9908 9908 1 50944 0 GSPLNAAPYGIESMSQDTEVR EETQEDKDCPIKEEKGSPLNAAPYGIESMS APYGIESMSQDTEVRSRVVGGSLRGAQAAS K G S V R S 2 1 1 1 0 1 2 2 0 1 1 0 1 0 2 3 1 0 1 1 0 0 21 0 2221.0321 P18031 P18031 351 371 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 1.408E-12 162.79 By MS/MS 6 0 1 1 3162000 3162000 0 5631 620 5834 13857 9909 9909 1 24657 0 GSPNANEPPLVFVGK KGSDEPPVFLEIHYKGSPNANEPPLVFVGK GSPNANEPPLVFVGKGITFDSGGISIKASA K G S G K G 1 0 2 0 0 0 1 2 0 0 1 1 0 1 3 1 0 0 0 2 0 0 15 0 1524.7936 P28838 P28838 268 282 LAP3 Cytosol aminopeptidase yes yes 2 3.1104E-07 187.58 By MS/MS 6 0 1 1 3564500 3564500 0 5632 722 5835 13858 9910 9910 1 27796 0 GSQELGMSNVQELSLR FERLVNDLSKIAQGRGSQELGMSNVQELSL SQELGMSNVQELSLRKKGLECLVSILKCMV R G S L R K 0 1 1 0 0 2 2 2 0 0 3 0 1 0 0 3 0 0 0 1 0 0 16 0 1746.857 Q9Y6D6 Q9Y6D6 594 609 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 1.3961E-07 162.41 By MS/MS 2.5 0.5 1 1 2 365070 365070 0 5633 3003 5836 13859;13860 9911 9911 1733 1 16213 0 GSQEVLGHAAR ______________________________ ______________________________ M G S A R L 2 1 0 0 0 1 1 2 1 0 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1123.5734 Q96AA3 Q96AA3 2 12 RFT1 Protein RFT1 homolog yes yes 2 0.015329 93.561 By MS/MS 1 0 1 1 233710 233710 0 5634 2120 5837 13861 9912 9912 1 11418 0 GSQFGQSCCLR NPIEKNLQMWEEMKKGSQFGQSCCLRAKID EMKKGSQFGQSCCLRAKIDMSSNNGCMRDP K G S L R A 0 1 0 0 2 2 0 2 0 0 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1298.5496 P07814 P07814 329 339 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.0323E-10 202.96 By MS/MS 3 0.816 1 1 1 3 4716600 4716600 0 5635 493 5838 13862;13863;13864 9913;9914 9914 2 125270 0 GSQFTSKEER QATQERTDLYAKQGRGSQFTSKEERDKWIK AKQGRGSQFTSKEERDKWIKKELKSLDQAI R G S E R D 0 1 0 0 0 1 2 1 0 0 0 1 0 1 0 2 1 0 0 0 0 0 10 1 1167.552 Q9UQE7 Q9UQE7 382 391 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.013024 118.03 By MS/MS 3 0 1 1 323390 323390 0 5636 2860 5839 13865 9915 9915 1 8442.1 0 GSQGPLPFHEK TRFAIYETVRDRVAKGSQGPLPFHEKVLLG RVAKGSQGPLPFHEKVLLGSVSGLAGGFVG K G S E K V 0 0 0 0 0 1 1 2 1 0 1 1 0 1 2 1 0 0 0 0 0 0 11 0 1195.5986 Q9UBX3 Q9UBX3 92 102 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 0.0015426 126.39 By MS/MS By matching 7.57 2.77 1 3 2 1 6 1 15762000 15737000 24073 5637 2761 5840 13866;13867;13868;13869;13870;13871;13872 9916;9917;9918;9919 9919 4 1427300 205370 GSQITQQSTNQSR HLTSMFEYLAPPRRKGSQITQQSTNQSRNP RKGSQITQQSTNQSRNPATTNQTEFERVF_ K G S S R N 0 1 1 0 0 4 0 1 0 1 0 0 0 0 0 3 2 0 0 0 0 0 13 0 1433.6859 P50750 P50750 346 358 CDK9 Cyclin-dependent kinase 9 yes yes 2 5.9961E-12 207.34 By MS/MS 7 0 1 1 717690 717690 0 5638 951 5841 13873 9920 9920 1 12825 0 GSRDHLFK ______________________________ ______________________________ M G S F K V 0 1 0 1 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 0 0 0 8 1 958.49846 O14966 O14966 2 9 RAB29 Ras-related protein Rab-7L1 yes yes 3 0.020857 98.629 By MS/MS 9 0 1 1 349300 349300 0 5639 138 5842 13874 9921 9921 1 200470 0 GSRDYDRGYDSR RDMDRYGGRDRYDDRGSRDYDRGYDSRIGS DDRGSRDYDRGYDSRIGSGRRAFGSGYRRD R G S S R I 0 3 0 3 0 0 0 2 0 0 0 0 0 0 0 2 0 0 2 0 0 0 12 2 1445.6284 P23588 P23588 262 273 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.04725 66.267 By MS/MS 5 0 1 1 0 0 0 5640 672 5843 13875 9922 9922 1 0 0 GSRGGSGGSYGGGGSGGGYGGGSGSR IGLGGRGGSGGSYGRGSRGGSGGSYGGGGS GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G S S R G 0 2 0 0 0 0 0 16 0 0 0 0 0 0 0 6 0 0 2 0 0 0 26 1 2090.875 P35527;CON__P35527 P35527 488 513 KRT9 Keratin, type I cytoskeletal 9 yes no 3 7.7129E-09 95.445 By matching By MS/MS 3.83 2.54 1 1 1 2 1 1 5 1834300 53626 1780700 + 5641 791 5844 13876;13877;13878;13879;13880;13881 9923;9924 9923 2 1463.9 7878800 GSRPIDTSR PLVDDGGWNTVPISKGSRPIDTSRLTKITK TVPISKGSRPIDTSRLTKITKPGSIDSNNQ K G S S R L 0 2 0 1 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 9 1 987.50976 Q04637 Q04637 1060 1068 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0069758 143.37 By MS/MS By matching 1.83 1.07 3 2 1 5 1 14261000 14247000 14332 5642 1264 5845 13882;13883;13884;13885;13886;13887 9925;9926;9927 9926 3 704650 14332 GSSASLVLK SHPADSVVSVLNKEKGSSASLVLKRLGFKG VLNKEKGSSASLVLKRLGFKGVWKGLFARI K G S L K R 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 3 0 0 0 1 0 0 9 0 860.49673 Q00325 Q00325 296 304 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.0022182 127.46 By MS/MS 3.5 2.69 1 1 1 1 4 4179800 4179800 0 5643 1230 5846 13888;13889;13890;13891 9928;9929;9930 9930 3 215840 0 GSSAVGLTAYVMKDPETR YVYNLVPRGQYTSGKGSSAVGLTAYVMKDP AVGLTAYVMKDPETRQLVLQTGALVLSDNG K G S T R Q 2 1 0 1 0 0 1 2 0 0 1 1 1 0 1 2 2 0 1 2 0 0 18 1 1880.9302 P33991 P33991 537 554 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.0028203 93.106 By MS/MS 4.5 0.5 1 1 2 1379300 1379300 0 5644 773 5847 13892;13893 9931 9931 524 1 40519 0 GSSDLIK GEKPYVCNKCGKSFRGSSDLIKHHRIHTGE NKCGKSFRGSSDLIKHHRIHTGEKPYECSE R G S I K H 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 7 0 718.38612 Q96JF6 Q96JF6 635 641 ZNF594 Zinc finger protein 594 yes yes 2 0.0076711 163.84 By MS/MS By matching 8 0 2 1 1 8044300 7858500 185820 5645 2207 5848 13894;13895 9932 9932 1 518420 1585300 GSSFEMTDDDSAIR SMTQQDSHAPLRDSRGSSFEMTDDDSAIRA RGSSFEMTDDDSAIRALTQFPLPKNLLAKV R G S I R A 1 1 0 3 0 0 1 1 0 1 0 0 1 1 0 3 1 0 0 0 0 0 14 0 1529.6304 Q7L2E3 Q7L2E3 224 237 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 2.3038E-35 261.35 By MS/MS By matching 3.4 0.49 3 2 4 1 3043600 2993200 50420 5646 1763 5849;5850 13896;13897;13898;13899;13900 9933;9934 9933 1245 2 79191 72262 GSSGGGCFGGSSGGYGGLGGFGGGSFR GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY GGYGGLGGFGGGSFRGSYGSSSFGGSYGGS R G S F R G 0 1 0 0 1 0 0 15 0 0 1 0 0 3 0 5 0 0 1 0 0 0 27 0 2341.9771 CON__P13645;P13645 CON__P13645 60 86 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.6078E-05 90.385 By matching By MS/MS 9 0 2 1 1 313100 110300 202800 + 5647 49 5851 13901;13902 9935;9936 9936 2 63301 2185600 GSSGGSGAKPSDAASEAAR NNQLFAPGGRLSWGKGSSGGSGAKPSDAAS GSGAKPSDAASEAARPATSTLNRFSALQQA K G S A R P 5 1 0 1 0 0 1 4 0 0 0 1 0 0 1 5 0 0 0 0 0 0 19 1 1661.7605 Q04637 Q04637 1096 1114 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 9.8361E-05 132.08 By MS/MS By matching 2.4 0.49 3 2 4 1 6448100 6441600 6500.2 5648 1264 5852 13903;13904;13905;13906;13907 9937;9938;9939 9937 3 313850 5472.5 GSSGGSGAKPSDAASEAARPATSTLNR NNQLFAPGGRLSWGKGSSGGSGAKPSDAAS AASEAARPATSTLNRFSALQQAVPTESTDN K G S N R F 6 2 1 1 0 0 1 4 0 0 1 1 0 0 2 6 2 0 0 0 0 0 27 2 2502.2059 Q04637 Q04637 1096 1122 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3;4 0.00053937 64.768 By MS/MS 3.46 1.6 1 4 2 2 2 2 13 16696000 16696000 0 5649 1264 5853 13908;13909;13910;13911;13912;13913;13914;13915;13916;13917;13918;13919;13920 9940;9941;9942;9943 9942 3 665160 0 GSSGVGLTAAVLR YIDRLAPRSQYTTGRGSSGVGLTAAVLRDS GRGSSGVGLTAAVLRDSVSGELTLEGGALV R G S L R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 0 2 1 0 0 2 0 0 13 0 1186.667 P33993 P33993 408 420 MCM7 DNA replication licensing factor MCM7 yes yes 2 3.634E-08 192.5 By MS/MS By matching 5.75 0.829 2 1 1 3 1 10343000 10334000 9442.1 5650 775 5854 13921;13922;13923;13924 9944 9944 1 331440 27939 GSSGVGLTAAVTTDQETGER YVLCTAPRAIPTTGRGSSGVGLTAAVTTDQ GLTAAVTTDQETGERRLEAGAMVLADRGVV R G S E R R 2 1 0 1 0 1 2 4 0 0 1 0 0 0 0 2 4 0 0 2 0 0 20 0 1934.9181 P25205 P25205 372 391 MCM3 DNA replication licensing factor MCM3 yes yes 2 1.7786E-76 305.48 By MS/MS 4 1.41 1 1 1 1 1 5 7915200 7915200 0 5651 683 5855 13925;13926;13927;13928;13929 9945 9945 1 180910 0 GSSKQQSEEDLLLQDFSR ______________________________ KQQSEEDLLLQDFSRNLSAKSSALFFGNAF K G S S R N 0 1 0 2 0 3 2 1 0 0 3 1 0 1 0 4 0 0 0 0 0 0 18 1 2065.9916 Q9UNL2 Q9UNL2 5 22 SSR3 Translocon-associated protein subunit gamma yes yes 3 0.0032157 92.39 By MS/MS 9 0 1 1 498060 498060 0 5652 2844 5856 13930 9946 9946 1 285840 0 GSSLGAGNVADR SIIFFDELDALAVERGSSLGAGNVADRVLA VERGSSLGAGNVADRVLAQLLTEMDGIEQL R G S D R V 2 1 1 1 0 0 0 3 0 0 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1102.5367 Q8NB90 Q8NB90 737 748 SPATA5 Spermatogenesis-associated protein 5 yes yes 2 0.00042279 142.19 By MS/MS 4 0 1 1 794710 794710 0 5653 1939 5857 13931 9947 9947 1 21695 0 GSSLVLYSDKK TSISADTHKYGYAPKGSSLVLYSDKKYRNY YAPKGSSLVLYSDKKYRNYQFFVDTDWQGG K G S K K Y 0 0 0 1 0 0 0 1 0 0 2 2 0 0 0 3 0 0 1 1 0 0 11 1 1195.6449 O95470 O95470 360 370 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.0001114 172.59 By MS/MS 6 0 1 1 4791500 4791500 0 5654 395 5858 13932 9948 9948 1 37365 0 GSSNSYAIK TIAECLADELINAAKGSSNSYAIKKKDELE LINAAKGSSNSYAIKKKDELERVAKSNR__ K G S I K K 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 3 0 0 1 0 0 0 9 0 925.45051 P46782 P46782 183 191 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.00013636 168.25 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 6190500 5882700 307880 5655 888 5859 13933;13934;13935 9949;9950 9950 2 3469400 3318100 GSSSGGGYSSGSSSYGSGGR SNVASKAAFGGSGGRGSSSGGGYSSGSSSY GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS R G S G R Q 0 1 0 0 0 0 0 8 0 0 0 0 0 0 0 9 0 0 2 0 0 0 20 0 1739.6983 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 525 544 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 2.6562E-31 222.88 By MS/MS By MS/MS 4.73 2.82 2 2 2 2 2 1 2 1 1 9 6 34620000 26089000 8531200 + 5656 52 5860 13936;13937;13938;13939;13940;13941;13942;13943;13944;13945;13946;13947;13948;13949;13950 9951;9952;9953;9954;9955;9956;9957;9958;9959;9960;9961;9962;9963;9964;9965;9966 9962 16 4298400 16761000 GSSSGGGYSSGSSSYGSGGRQSGSR SNVASKAAFGGSGGRGSSSGGGYSSGSSSY GSSSYGSGGRQSGSRGGSGGGGSISGGGYG R G S S R G 0 2 0 0 0 1 0 9 0 0 0 0 0 0 0 11 0 0 2 0 0 0 25 1 2254.9435 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 525 549 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.034698 41.296 By matching By MS/MS 1.5 0.5 1 1 1 1 202620 89737 112880 + 5657 52 5861 13951;13952 9967 9967 1 4460.4 112880 GSSSGGVKSSGGSSSVK RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS SSGGVKSSGGSSSVKFVSTTYSGVTR____ R G S V K F 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 8 0 0 0 2 0 0 17 1 1453.7009 P04264 P04264 617 633 KRT1 Keratin, type II cytoskeletal 1 yes yes 2;3 0.00024798 137.93 By MS/MS 1 0 2 2 376820 0 376820 5658 450 5862 13953;13954 9968;9969 9968 2 0 376820 GSSSGGVKSSGGSSSVR RGSGGGSSGGSIGGRGSSSGGVKSSGGSSS SSGGVKSSGGSSSVRFVSTTYSGVTR____ R G S V R F 0 1 0 0 0 0 0 5 0 0 0 1 0 0 0 8 0 0 0 2 0 0 17 1 1481.707 CON__P04264 CON__P04264 617 633 yes yes 3 0.0019477 118.55 By MS/MS 1 0 1 1 478540 0 478540 + 5659 45 5863 13955 9970 9970 1 0 478540 GSSSNEYLYER VLEGELYLIPFALLKGSSSNEYLYERFGLL ALLKGSSSNEYLYERFGLLAVPSIRSLSVQ K G S E R F 0 1 1 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 11 0 1303.5681 Q96AY4 Q96AY4 1439 1449 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.021351 88.134 By MS/MS 2 0 1 1 190560 190560 0 5660 2125 5864 13956 9971 9971 1 9471.9 0 GSSSQLYR HNLLVSSLDKVQAGKGSSSQLYRESATTME DKVQAGKGSSSQLYRESATTMEKLAVLKAW K G S Y R E 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 3 0 0 1 0 0 0 8 0 896.43519 Q9P2D3 Q9P2D3 1404 1411 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.01687 110.81 By MS/MS 2 0 1 1 81445 81445 0 5661 2736 5865 13957 9972 9972 1 4048.3 0 GSTAPVGGGAFPTIVER EQGINEFLRELSFGRGSTAPVGGGAFPTIV TAPVGGGAFPTIVEREPWDGRDGELPVEDD R G S E R E 2 1 0 0 0 0 1 4 0 1 0 0 0 1 2 1 2 0 0 2 0 0 17 0 1614.8366 Q15084 Q15084 393 409 PDIA6 Protein disulfide-isomerase A6 yes yes 2 2.1418E-18 201.04 By MS/MS By matching 6.75 0.829 2 1 1 3 1 4045200 3994800 50354 5662 1478 5866 13958;13959;13960;13961 9973 9973 1 51993 154430 GSTCAFTECILR LDRLNIIHVTGTKGKGSTCAFTECILRSYG KGKGSTCAFTECILRSYGLKTGFFSSPHLV K G S L R S 1 1 0 0 2 0 1 1 0 1 1 0 0 1 0 1 2 0 0 0 0 0 12 0 1413.6381 Q05932 Q05932 108 119 FPGS Folylpolyglutamate synthase, mitochondrial yes yes 2 0.0077626 119.68 By MS/MS 6 0 1 1 1750300 1750300 0 5663 1271 5867 13962 9974 9974 1 13649 0 GSTDNLMDDIER KHEKEDGAISTIVLRGSTDNLMDDIERAVD VLRGSTDNLMDDIERAVDDGVNTFKVLTRD R G S E R A 0 1 1 3 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 12 0 1364.5878 P50990 P50990 379 390 CCT8 T-complex protein 1 subunit theta yes yes 2 5.5108E-11 203.03 By MS/MS 5.33 2.32 1 1 1 1 1 3 2 1 1 12 82047000 82047000 0 5664 955 5868;5869 13963;13964;13965;13966;13967;13968;13969;13970;13971;13972;13973;13974 9975;9976;9977;9978;9979;9980;9981;9982;9983;9984 9975 705 9 1156100 0 GSTDNLMDDIERAVDDGVNTFK KHEKEDGAISTIVLRGSTDNLMDDIERAVD DDIERAVDDGVNTFKVLTRDKRLVPGGGAT R G S F K V 1 1 2 5 0 0 1 2 0 1 1 1 1 1 0 1 2 0 0 2 0 0 22 1 2411.0911 P50990 P50990 379 400 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.0002531 120.66 By MS/MS 6 0 4 4 15737000 15737000 0 5665 955 5870;5871 13975;13976;13977;13978 9985;9986;9987;9988;9989 9986 705 5 122720 0 GSTHPQPGVSPPAAPAAPGPK GLSSSPSEILQELGKGSTHPQPGVSPPAAP PGVSPPAAPAAPGPKDGPGETDAFGNSEGK K G S P K D 4 0 0 0 0 1 0 3 1 0 0 1 0 0 7 2 1 0 0 1 0 0 21 0 1919.9854 O94925 O94925 86 106 GLS Glutaminase kidney isoform, mitochondrial yes yes 3 0.0077463 64.723 By MS/MS 6 0 1 1 7779700 7779700 0 5666 359 5872 13979 9990 9990 1 60666 0 GSTLDLSDLEAEK VGWLLVRKHPAVKEKGSTLDLSDLEAEKLV EKGSTLDLSDLEAEKLVMFQRRYYKPGLLM K G S E K L 1 0 0 2 0 0 2 1 0 0 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1376.6671 O00767 O00767 197 209 SCD Acyl-CoA desaturase yes yes 2 1.5308E-46 286.71 By MS/MS By matching 5.9 2.98 1 1 1 1 2 2 1 1 8 2 35004000 34922000 82628 5667 109 5873 13980;13981;13982;13983;13984;13985;13986;13987;13988;13989 9991;9992;9993;9994;9995;9996;9997 9991 7 1739700 616910 GSTPYGGVKLEDLIVK GGMESMSNVPYVMNRGSTPYGGVKLEDLIV STPYGGVKLEDLIVKDGLTDVYNKIHMGSC R G S V K D 0 0 0 1 0 0 1 3 0 1 2 2 0 0 1 1 1 0 1 2 0 0 16 1 1674.9192 P24752 P24752 166 181 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.028496 124.07 By MS/MS 7 0 1 1 2296300 2296300 0 5668 680 5874 13990 9998 9998 1 41036 0 GSVAEAEDCYNTALR FPDAYCNLANALKEKGSVAEAEDCYNTALR GSVAEAEDCYNTALRLCPTHADSLNNLANI K G S L R L 3 1 1 1 1 0 2 1 0 0 1 0 0 0 0 1 1 0 1 1 0 0 15 0 1654.7257 O15294 O15294 307 321 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 7.6183E-77 308.6 By MS/MS 4 0 1 1 994530 994530 0 5669 167 5875 13991 9999 9999 1 27150 0 GSVISPTELEAPILVPHTAQR PSLRSRNTIFTLGTRGSVISPTELEAPILV TELEAPILVPHTAQRGEQRYPFEALFRSQH R G S Q R G 2 1 0 0 0 1 2 1 1 2 2 0 0 0 3 2 2 0 0 2 0 0 21 0 2214.2008 Q8N1B4 Q8N1B4 351 371 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 3 0.041226 51.971 By MS/MS 5 0.816 1 1 1 3 1251800 1251800 0 5670 1897 5876 13992;13993;13994 10000 10000 1 28462 0 GSYGDLGGPIITTQVTIPK PQGGSGYDYSYAGGRGSYGDLGGPIITTQV DLGGPIITTQVTIPKDLAGSIIGKGGQRIK R G S P K D 0 0 0 1 0 1 0 4 0 3 1 1 0 0 2 1 3 0 1 1 0 0 19 0 1916.0255 P61978 P61978 378 396 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 3.666E-19 197.19 By MS/MS 6 0 1 1 8123600 8123600 0 5671 1110 5877 13995 10001;10002 10001 2 63348 0 GSYNDFSFVTHTNR YFDRDLHTNSPRHSKGSYNDFSFVTHTNRE KGSYNDFSFVTHTNREGVPMRKGEHLGEFN K G S N R E 0 1 2 1 0 0 0 1 1 0 0 0 0 2 0 2 2 0 1 1 0 0 14 0 1643.7328 Q9UG56 Q9UG56 347 360 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.0011983 142.76 By MS/MS 8 0 1 1 1318100 1318100 0 5672 2770 5878 13996 10003 10003 1 86954 0 GTAAAAAAAAAAAAAGEGAR ______________________________ AAAAAAAAAAGEGARSPSPAAVSLGLGVAV M G T A R S 14 1 0 0 0 0 1 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 20 0 1569.7859 Q7RTP0 Q7RTP0 2 21 NIPA1 Magnesium transporter NIPA1 yes yes 2 8.6363E-05 116.96 By MS/MS 1.5 0.5 1 1 2 181120 181120 0 5673 1774 5879 13997;13998 10004 10004 1 8926.1 0 GTAAILEYLR DGNPFRVPRAAILMKGTAAILEYLRDRIPT AILMKGTAAILEYLRDRIPT__________ K G T L R D 2 1 0 0 0 0 1 1 0 1 2 0 0 0 0 0 1 0 1 0 0 0 10 0 1105.6132 Q9H9A6 Q9H9A6 588 597 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.00054942 143.03 By MS/MS 5 0 1 1 121350 121350 0 5674 2532 5880 13999 10005 10005 1 4988 0 GTAVAICR RQAGIRVIMITGDNKGTAVAICRRIGIFGQ MITGDNKGTAVAICRRIGIFGQDEDVTSKA K G T C R R 2 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 8 0 846.43817 P16615;Q93084 P16615 629 636 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 0.0036598 145.04 By MS/MS 3 1.41 1 1 1 1 1 5 5863400 5863400 0 5675 608 5881 14000;14001;14002;14003;14004 10006;10007;10008;10009;10010 10006 5 219770 0 GTAVVNGEFK SCHAPAVTQHAPYFKGTAVVNGEFKDLSLD APYFKGTAVVNGEFKDLSLDDFKGKYLVLF K G T F K D 1 0 1 0 0 0 1 2 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1020.524 P30048 P30048 74 83 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2 0.00092394 126.39 By MS/MS 9.5 0.5 1 1 2 2758900 2758900 0 5676 731 5882 14005;14006 10011 10011 1 1617600 0 GTAYTFFTPGNLK DYVHRIGRTARSTNKGTAYTFFTPGNLKQA NKGTAYTFFTPGNLKQARELIKVLEEANQA K G T L K Q 1 0 1 0 0 0 0 2 0 0 1 1 0 2 1 0 3 0 1 0 0 0 13 0 1415.7085 Q92841 Q92841 516 528 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 1.2634E-05 172.21 By MS/MS 5.5 0.5 1 1 2 845200 845200 0 5677 2082 5883 14007;14008 10012 10012 1 19882 0 GTAYVVYEDIFDAK GPIRQIRVGNTPETRGTAYVVYEDIFDAKN RGTAYVVYEDIFDAKNACDHLSGFNVCNRY R G T A K N 2 0 0 2 0 0 1 1 0 1 0 1 0 1 0 0 1 0 2 2 0 0 14 0 1589.7613 Q9Y3B4 Q9Y3B4 58 71 SF3B6 Splicing factor 3B subunit 6 yes yes 2 0.0027098 139.86 By MS/MS 10 0 1 1 222310 222310 0 5678 2925 5884 14009 10013 10013 1 236290 0 GTCGIQYR IPQIGDKFASRHGQKGTCGIQYRQEDMPFT ASRHGQKGTCGIQYRQEDMPFTCEGITPDI K G T Y R Q 0 1 0 0 1 1 0 2 0 1 0 0 0 0 0 0 1 0 1 0 0 0 8 0 953.4389 P30876 P30876 943 950 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.012352 116.9 By MS/MS 3 0 1 1 0 0 0 5679 748 5885 14010 10014 10014 1 0 0 GTDIMYTGTLDCWR FDTVRRRMMMQSGRKGTDIMYTGTLDCWRK KGTDIMYTGTLDCWRKIARDEGGKAFFKGA K G T W R K 0 1 0 2 1 0 0 2 0 1 1 0 1 0 0 0 3 1 1 0 0 0 14 0 1687.7334 P05141 P05141 246 259 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 3.185E-35 261.87 By MS/MS 3.56 2.54 2 2 2 1 2 9 8576700 8576700 0 5680 469 5886;5887 14011;14012;14013;14014;14015;14016;14017;14018;14019 10015;10016;10017;10018;10019;10020 10020 256 6 504670 0 GTDIMYTGTLDCWRK FDTVRRRMMMQSGRKGTDIMYTGTLDCWRK GTDIMYTGTLDCWRKIARDEGGKAFFKGAW K G T R K I 0 1 0 2 1 0 0 2 0 1 1 1 1 0 0 0 3 1 1 0 0 0 15 1 1815.8284 P05141 P05141 246 260 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3 0.028235 82.705 By MS/MS 1 0 1 1 611440 611440 0 5681 469 5888 14020 10021 10021 256 1 29874 0 GTDTVAGLALIK ETAGIGASAHLVNFKGTDTVAGLALIKKYY NFKGTDTVAGLALIKKYYGTKDPVPGYSVP K G T I K K 2 0 0 1 0 0 0 2 0 1 2 1 0 0 0 0 2 0 0 1 0 0 12 0 1157.6656 P43490 P43490 217 228 NAMPT Nicotinamide phosphoribosyltransferase yes yes 2 0.0013897 161.27 By MS/MS 6 0 1 1 2262900 2262900 0 5682 866 5889 14021 10022 10022 1 17646 0 GTEAGQVGEPGIPTGEAGPSCSSASDKLPR PTAKAYTGFSSNSERGTEAGQVGEPGIPTG EAGPSCSSASDKLPRVAKSKFFEDSEDESD R G T P R V 3 1 0 1 1 1 3 6 0 1 1 1 0 0 4 4 2 0 0 1 0 0 30 1 2911.3618 O15355 O15355 221 250 PPM1G Protein phosphatase 1G yes yes 3 0.0027521 53.097 By MS/MS 5 0 1 1 1023000 1023000 0 5683 170 5890 14022 10023 10023 1 42049 0 GTEDFIVESLDASFR PANNIVKFLVGFTNKGTEDFIVESLDASFR GTEDFIVESLDASFRYPQDYQFYIQNFTAL K G T F R Y 1 1 0 2 0 0 2 1 0 1 1 0 0 2 0 2 1 0 0 1 0 0 15 0 1684.7944 P43307 P43307 111 125 SSR1 Translocon-associated protein subunit alpha yes yes 2 1.7887E-05 140.14 By MS/MS 8 0 1 1 80281 80281 0 5684 863 5891 14023 10024;10025 10024 2 5296.1 0 GTEDITSPHGIPLDLLDR PIVIFASNRGNCVIRGTEDITSPHGIPLDL DITSPHGIPLDLLDRVMIIRTMLYTPQEMK R G T D R V 0 1 0 3 0 0 1 2 1 2 3 0 0 0 2 1 2 0 0 0 0 0 18 0 1947.9902 Q9Y265 Q9Y265 340 357 RUVBL1 RuvB-like 1 yes yes 2;3 4.8601E-07 148.85 By MS/MS 6 0 2 2 9866000 9866000 0 5685 2870 5892 14024;14025 10026;10027 10026 2 76935 0 GTEFGIDYNSWEVGPK LFFEGATVVILNMPKGTEFGIDYNSWEVGP TEFGIDYNSWEVGPKFRGVKMIPPGIHFLH K G T P K F 0 0 1 1 0 0 2 3 0 1 0 1 0 1 1 1 1 1 1 1 0 0 16 0 1797.821 Q9Y312 Q9Y312 29 44 AAR2 Protein AAR2 homolog yes yes 2 2.2849E-21 229.56 By MS/MS 7 0 1 1 368470 368470 0 5686 2910 5893 14026 10028 10028 1 6584.7 0 GTEITHAVVIK GGVPLVKEKPKMFAKGTEITHAVVIKKLNE MFAKGTEITHAVVIKKLNEILQARGKKGTD K G T I K K 1 0 0 0 0 0 1 1 1 2 0 1 0 0 0 0 2 0 0 2 0 0 11 0 1166.6659 Q99613;B5ME19 Q99613 321 331 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 6.902E-07 183.43 By MS/MS By matching 4.2 0.4 4 1 3 2 13773000 13607000 166620 5687 2275 5894 14027;14028;14029;14030;14031 10029;10030;10031 10030 3 391120 348160 GTEITHAVVIKK GGVPLVKEKPKMFAKGTEITHAVVIKKLNE FAKGTEITHAVVIKKLNEILQARGKKGTDR K G T K K L 1 0 0 0 0 0 1 1 1 2 0 2 0 0 0 0 2 0 0 2 0 0 12 1 1294.7609 Q99613;B5ME19 Q99613 321 332 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.0012476 121.61 By MS/MS 4.5 1.12 1 1 1 1 4 3535300 3535300 0 5688 2275 5895 14032;14033;14034;14035 10032 10032 1 92459 0 GTEPFVTGVR IPSPIQVIEDDRNNRGTEPFVTGVRGQVPP DRNNRGTEPFVTGVRGQVPPLVTTNFLVKD R G T V R G 0 1 0 0 0 0 1 2 0 0 0 0 0 1 1 0 2 0 0 2 0 0 10 0 1061.5506 P53992 P53992 341 350 SEC24C Protein transport protein Sec24C yes yes 2 0.013809 96.668 By MS/MS 4 0 1 1 656180 656180 0 5689 1009 5896 14036 10033 10033 1 17913 0 GTEQELIGLLQAR LYENKQFEKIAEELKGTEQELIGLLQAREK LKGTEQELIGLLQAREKEVHDLEIQLTAIT K G T A R E 1 1 0 0 0 2 2 2 0 1 3 0 0 0 0 0 1 0 0 0 0 0 13 0 1426.778 Q15431 Q15431 462 474 SYCP1 Synaptonemal complex protein 1 yes yes 2 0.0052503 102.06 By MS/MS By matching 5 3.25 1 1 2 1 2 2 5 3430800 2924800 505970 5690 1501 5897 14037;14038;14039;14040;14041;14042;14043 10034;10035 10035 2 790390 2370200 GTEVQVDDIKR IQLITAASLVCRKRKGTEVQVDDIKRVYSL RKRKGTEVQVDDIKRVYSLFLDESRSTQYM K G T K R V 0 1 0 2 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 1 1258.6517 Q9Y230 Q9Y230 418 428 RUVBL2 RuvB-like 2 yes yes 2;3 5.6628E-07 198.62 By MS/MS 6 0 2 2 36814000 36814000 0 5691 2864 5898 14044;14045 10036;10037 10037 2 287080 0 GTFDNAETK LNKWQALLVQIRKARGTFDNAETKKEFGPV QIRKARGTFDNAETKKEFGPVVIDYGKVQS R G T T K K 1 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 9 0 981.44034 Q14204 Q14204 1091 1099 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0010895 140.11 By MS/MS 1 0 1 1 453220 453220 0 5692 1421 5899 14046 10038 10038 1 22143 0 GTFDNAETKK LNKWQALLVQIRKARGTFDNAETKKEFGPV IRKARGTFDNAETKKEFGPVVIDYGKVQSK R G T K K E 1 0 1 1 0 0 1 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 10 1 1109.5353 Q14204 Q14204 1091 1100 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0018866 145.46 By MS/MS 1.5 0.5 1 1 2 365500 365500 0 5693 1421 5900 14047;14048 10039;10040 10039 2 17939 0 GTFESGLK DVVIKAQVLAGGRGKGTFESGLKGGVKIVF LAGGRGKGTFESGLKGGVKIVFSPEEAKAV K G T L K G 0 0 0 0 0 0 1 2 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 837.42323 Q9P2R7 Q9P2R7 109 116 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.0080258 125.81 By MS/MS 7 0 1 1 1774400 1774400 0 5694 2741 5901 14049 10041 10041 1 31710 0 GTFESGLKGGVK DVVIKAQVLAGGRGKGTFESGLKGGVKIVF RGKGTFESGLKGGVKIVFSPEEAKAVSSQM K G T V K I 0 0 0 0 0 0 1 4 0 0 1 2 0 1 0 1 1 0 0 1 0 0 12 1 1178.6295 Q9P2R7 Q9P2R7 109 120 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.035003 107.45 By MS/MS 7 0 1 1 3346600 3346600 0 5695 2741 5902 14050 10042 10042 1 59805 0 GTGGVDTAATGGVFDISNLDR SRFPKILENLRLQKRGTGGVDTAATGGVFD TAATGGVFDISNLDRLGKSEVELVQLVIDG R G T D R L 2 1 1 3 0 0 0 5 0 1 1 0 0 1 0 1 3 0 0 2 0 0 21 0 2021.9654 P12532 P12532 354 374 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 1.827E-90 315.73 By MS/MS 7 0.816 1 1 1 3 4095200 4095200 0 5696 566 5903 14051;14052;14053 10043 10043 1 79613 0 GTGGVDTAAVGGVFDVSNADR EKFSEVLKRLRLQKRGTGGVDTAAVGGVFD TAAVGGVFDVSNADRLGFSEVELVQMVVDG R G T D R L 3 1 1 3 0 0 0 5 0 0 0 0 0 1 0 1 2 0 0 4 0 0 21 0 1963.9235 P12277 P12277 321 341 CKB Creatine kinase B-type yes yes 2 1.0136E-24 204.17 By MS/MS 8 0.816 1 1 1 3 5805500 5805500 0 5697 565 5904 14054;14055;14056 10044 10044 1 159090 0 GTGIAAQTAGIAAAAR AFASCGTEGFRNAKKGTGIAAQTAGIAAAA TGIAAQTAGIAAAARAKQKGVIHIRVVVKG K G T A R A 7 1 0 0 0 1 0 3 0 2 0 0 0 0 0 0 2 0 0 0 0 0 16 0 1398.7579 P82912 P82912 123 138 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2 1.1843E-50 286.19 By MS/MS 10 0 1 1 1341600 1341600 0 5698 1206 5905 14057 10045 10045 1 1426000 0 GTGIVSAPVPK GRCGSVLVRLIPAPRGTGIVSAPVPKKLLM PAPRGTGIVSAPVPKKLLMMAGIDDCYTSA R G T P K K 1 0 0 0 0 0 0 2 0 1 0 1 0 0 2 1 1 0 0 2 0 0 11 0 1024.5917 P15880 P15880 201 211 RPS2 40S ribosomal protein S2 yes yes 2 0.0083888 99.815 By MS/MS By MS/MS 8 0.816 1 1 1 2 1 1340400 1207900 132580 5699 602 5906 14058;14059;14060 10046;10047;10048 10048 3 190400 1131000 GTGLQPGEEELPDIAPPLVTPDEPK VSIEMPEELDISQLRGTGLQPGEEELPDIA LPDIAPPLVTPDEPKGSLGFYGNEDEDSFC R G T P K G 1 0 0 2 0 1 4 3 0 1 3 1 0 0 6 0 2 0 0 1 0 0 25 0 2598.3065 P45974 P45974 604 628 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 3 0.03636 42.185 By MS/MS 4 0 1 1 209850 209850 0 5700 873 5907 14061 10049 10049 1 5728.6 0 GTGVVTSVPSDSPDDIAALR KVIYVLPMLTIKEDKGTGVVTSVPSDSPDD TSVPSDSPDDIAALRDLKKKQALRAKYGIR K G T L R D 2 1 0 3 0 0 0 2 0 1 1 0 0 0 2 3 2 0 0 3 0 0 20 0 1955.98 Q9P2J5 Q9P2J5 385 404 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 3.1091E-24 198.48 By MS/MS By matching 3.33 0.471 2 1 2 1 6376500 6320300 56235 5701 2738 5908 14062;14063;14064 10050;10051 10050 2 166190 80597 GTHTGVWVGVSGSETSEALSR YEAIVDGGINPDSLRGTHTGVWVGVSGSET WVGVSGSETSEALSRDPETLVGYSMVGCQR R G T S R D 1 1 0 0 0 0 2 4 1 0 1 0 0 0 0 4 3 1 0 3 0 0 21 0 2116.0185 P49327 P49327 102 122 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.00080798 87.356 By MS/MS 2 0 1 1 275460 275460 0 5702 915 5909 14065 10052;10053 10052 2 13692 0 GTIQVITQGTSLK EALGTLMRAWAGSPKGTIQVITQGTSLKNA PKGTIQVITQGTSLKNAGNCLSPAVIVGLL K G T L K N 0 0 0 0 0 2 0 2 0 2 1 1 0 0 0 1 3 0 0 1 0 0 13 0 1344.7613 O43175 O43175 352 364 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 2.8905E-46 284.1 By MS/MS By MS/MS 6.83 1.34 1 2 1 1 1 5 1 82548000 82375000 172410 5703 185 5910 14066;14067;14068;14069;14070;14071 10054;10055;10056;10057;10058 10055 5 1112500 528770 GTLAYLPEEYIK SPSQSSMVARTQTVRGTLAYLPEEYIKTGR TVRGTLAYLPEEYIKTGRLAVDTDTFSFGV R G T I K T 1 0 0 0 0 0 2 1 0 1 2 1 0 0 1 0 1 0 2 0 0 0 12 0 1395.7286 P51617 P51617 386 397 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 0.00096208 133.75 By MS/MS 5.5 0.5 1 1 2 1230400 1230400 0 5704 971 5911 14072;14073 10059 10059 1 39273 0 GTLDPVEK ITRARFEELNADLFRGTLDPVEKALRDAKL LNADLFRGTLDPVEKALRDAKLDKSQIHDI R G T E K A 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 8 0 857.44945 P11142 P11142 312 319 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.014788 113.5 By MS/MS 5.33 1.25 1 1 1 3 37606000 37606000 0 5705 546 5912 14074;14075;14076 10060 10060 1 1514900 0 GTLLAFAEAR SVDTFRIPLITATPRGTLLAFAEARKMSSS TATPRGTLLAFAEARKMSSSDEGAKFIALR R G T A R K 3 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 10 0 1047.5713 Q99519 Q99519 88 97 NEU1 Sialidase-1 yes yes 2 1.0817E-06 193.38 By MS/MS 7.5 0.5 1 1 2 367360 367360 0 5706 2270 5913 14077;14078 10061 10061 1 9381.8 0 GTLPAVEPFQR THPSESKINLRIQTRGTLPAVEPFQRGLNE IQTRGTLPAVEPFQRGLNELMNVCQHVLDK R G T Q R G 1 1 0 0 0 1 1 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 11 0 1213.6455 P0DPB6 P0DPB6 88 98 yes yes 2 0.0081647 100.02 By MS/MS 10 0 1 1 829300 829300 0 5707 533 5914 14079 10062 10062 1 881460 0 GTLVGDILR GKSTAFQLVELGPGRGTLVGDILRVFTQLG ELGPGRGTLVGDILRVFTQLGSVLKNCDIS R G T L R V 0 1 0 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 942.54983 Q7L592 Q7L592 128 136 NDUFAF7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 2 0.0013283 145.16 By MS/MS 7 0 1 1 1020600 1020600 0 5708 1766 5915 14080 10063 10063 1 18239 0 GTNDMKQQHVIETLIGK VKEMNPALGIDCLHKGTNDMKQQHVIETLI NDMKQQHVIETLIGKKQQISLATQMVRMIL K G T G K K 0 0 1 1 0 2 1 2 1 2 1 2 1 0 0 0 2 0 0 1 0 0 17 1 1910.9884 P48643 P48643 497 513 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 2.8968E-07 168 By MS/MS 6 0 2 2 8037100 8037100 0 5709 909 5916 14081;14082 10064;10065 10065 2 62674 0 GTNIQENEYVK EAIDFDSQACQLRVKGTNIQENEYVKMGAY LRVKGTNIQENEYVKMGAYHTIELEPNRQF K G T V K M 0 0 2 0 0 1 2 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 11 0 1293.6201 Q9BRX2 Q9BRX2 85 95 PELO Protein pelota homolog yes yes 2 1.3697E-08 195.36 By MS/MS 7 0 1 1 3470000 3470000 0 5710 2331 5917 14083 10066 10066 1 62009 0 GTNVNQLNYR GKCRVPAWCDRILWRGTNVNQLNYRSHMEL RILWRGTNVNQLNYRSHMELKTSDHKPVSA R G T Y R S 0 1 3 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1177.584 Q01968 Q01968 505 514 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 2 2.5893E-05 174.02 By MS/MS 4 0 1 1 920580 920580 0 5711 1248 5918 14084 10067 10067 1 25131 0 GTNYLADVFEK MKENFPNFLSACDKKGTNYLADVFEKKDKN CDKKGTNYLADVFEKKDKNEDKKIDFSEFL K G T E K K 1 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 1 0 0 11 0 1255.6085 P31151 P31151 51 61 S100A7 Protein S100-A7 yes yes 2 0.038917 79.659 By MS/MS 8 0 2 2 422120 0 422120 5712 750 5919 14085;14086 10068;10069 10068 2 0 3601200 GTPFETPDQGK LIHNMGMYIFLHTVKGTPFETPDQGKARLL HTVKGTPFETPDQGKARLLTHWEQMDYGVQ K G T G K A 0 0 0 1 0 1 1 2 0 0 0 1 0 1 2 0 2 0 0 0 0 0 11 0 1175.5459 Q8N138;Q9P0S3;Q53FV1 Q8N138 69 79 ORMDL3;ORMDL1;ORMDL2 ORM1-like protein 3;ORM1-like protein 1;ORM1-like protein 2 no no 2 0.0059183 103.88 By MS/MS By matching 10 0 2 1 1 2426100 2397000 29058 5713 1893;1583 5920 14087;14088 10070 10070 1 2547800 745310 GTPLDTEVPMER MTSQPSMGALVACTRGTPLDTEVPMERVFD CTRGTPLDTEVPMERVFDYSEYWEGARGLY R G T E R V 0 1 0 1 0 0 2 1 0 0 1 0 1 0 2 0 2 0 0 1 0 0 12 0 1343.6391 P11498 P11498 819 830 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.00025348 144.65 By MS/MS 4 0.707 1 2 1 4 4733700 4733700 0 5714 555 5921;5922 14089;14090;14091;14092 10071;10072 10071 349 2 133190 0 GTPQKDVIIK ______________________________ ______________________________ M G T I K S 0 0 0 1 0 1 0 1 0 2 0 2 0 0 1 0 1 0 0 1 0 0 10 1 1097.6445 P53611 P53611 2 11 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 2 0.0076828 114.86 By MS/MS 7.5 0.5 1 1 2 1943400 1943400 0 5715 1003 5923 14093;14094 10073 10073 1 121210 0 GTQGATAGASSELDASK YRGRKKGKKKDQIGKGTQGATAGASSELDA QGATAGASSELDASKTVSSPPTSPRPGSAA K G T S K T 4 0 0 1 0 1 1 3 0 0 1 1 0 0 0 3 2 0 0 0 0 0 17 0 1549.722 O76094 O76094 601 617 SRP72 Signal recognition particle subunit SRP72 yes yes 2 1.3908E-10 167.92 By MS/MS By MS/MS 6.5 2.06 2 1 1 3 1 8890600 8854400 36210 5716 346 5924 14095;14096;14097;14098 10074;10075;10076 10075 3 580140 107150 GTQGVVTNFEIFR KNGDYLCVKVDRTPKGTQGVVTNFEIFRMR PKGTQGVVTNFEIFRMREKQVPVDVVEMKE K G T F R M 0 1 1 0 0 1 1 2 0 1 0 0 0 2 0 0 2 0 0 2 0 0 13 0 1466.7518 P55884 P55884 536 548 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 7.3706E-19 253.79 By MS/MS By MS/MS 4.29 1.83 1 1 2 1 1 1 6 1 12596000 12525000 70877 5717 1040 5925 14099;14100;14101;14102;14103;14104;14105 10077;10078;10079;10080;10081;10082;10083 10081 7 295420 148100 GTQSLPTASASK LLEGAVAFMPEDITKGTQSLPTASASKFPS ITKGTQSLPTASASKFPSSGPVTPQPTALT K G T S K F 2 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 2 0 0 0 0 0 12 0 1146.5881 Q9Y679 Q9Y679 348 359 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.0004867 147.28 By MS/MS By matching 7 0 2 1 1 6630100 6603200 26809 5718 2997 5926 14106;14107 10084 10084 1 118000 110060 GTQTYSVLEGDPSENYSK YDRVVRREICRIITKGTQTYSVLEGDPSEN TYSVLEGDPSENYSKYLLSLKEKEEDSSGH K G T S K Y 0 0 1 1 0 1 2 2 0 0 1 1 0 0 1 3 2 0 2 1 0 0 18 0 1973.8854 P52701 P52701 520 537 MSH6 DNA mismatch repair protein Msh6 yes yes 2 5.4835E-26 231.13 By MS/MS 3.5 0.5 1 1 2 1546800 1546800 0 5719 989 5927 14108;14109 10085 10085 1 40547 0 GTRDDEYDYLFK ______________________________ ______________________________ M G T F K V 0 1 0 3 0 0 1 1 0 0 1 1 0 1 0 0 1 0 2 0 0 0 12 1 1520.6783 P62491;Q15907 P62491 2 13 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.006519 119.45 By MS/MS 9 0 1 1 1157400 1157400 0 5720 1136 5928 14110 10086 10086 1 664250 0 GTSFDAAATSGGSASSEK CTVKCDEKVKVFSVRGTSFDAAATSGGSAS FDAAATSGGSASSEKASSTSPVEISEWLDQ R G T E K A 4 0 0 1 0 0 1 3 0 0 0 1 0 1 0 5 2 0 0 0 0 0 18 0 1629.7118 P13804 P13804 170 187 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 3.0421E-55 274.39 By MS/MS 7 0.816 1 1 1 3 5955200 5955200 0 5721 582 5929 14111;14112;14113 10087 10087 1 334720 0 GTSKLPK AMSLPQLNEKEAAEKGTSKLPKSLSSSPVK NEKEAAEKGTSKLPKSLSSSPVKKANDGEG K G T P K S 0 0 0 0 0 0 0 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 7 1 729.43849 Q9H3Q1 Q9H3Q1 131 137 CDC42EP4 Cdc42 effector protein 4 yes yes 1 0.050811 68.398 By MS/MS 9.5 0.5 1 1 2 1017500 1017500 0 5722 2492 5930 14114;14115 10088 10088 0 921080 0 GTSYQSPHGIPIDLLDR PVLIMATNRGITRIRGTSYQSPHGIPIDLL SYQSPHGIPIDLLDRLLIVSTTPYSEKDTK R G T D R L 0 1 0 2 0 1 0 2 1 2 2 0 0 0 2 2 1 0 1 0 0 0 17 0 1867.9428 Q9Y230 Q9Y230 337 353 RUVBL2 RuvB-like 2 yes yes 2;3 0.029213 76.82 By MS/MS 6 0 2 2 13728000 13728000 0 5723 2864 5931 14116;14117 10089;10090 10089 2 107050 0 GTTAVLTEK PNKKGTRLGRYRCEKGTTAVLTEKITPLEI RYRCEKGTTAVLTEKITPLEIEVLEETVQT K G T E K I 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 3 0 0 1 0 0 9 0 918.50221 Q99436 Q99436 250 258 PSMB7 Proteasome subunit beta type-7 yes yes 2 0.025427 106.6 By MS/MS 9 0.816 1 1 1 3 3280300 3280300 0 5724 2265 5932 14118;14119;14120 10091;10092 10092 2 1369500 0 GTVGFSGAELENLVNQAALK KIKFDQSVDPEIIARGTVGFSGAELENLVN SGAELENLVNQAALKAAVDGKEMVTMKELE R G T L K A 3 0 2 0 0 1 2 3 0 0 3 1 0 1 0 1 1 0 0 2 0 0 20 0 2017.048 Q96TA2 Q96TA2 537 556 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2;3 2.2404E-123 353.91 By MS/MS 6 0 2 2 6609200 6609200 0 5725 2263 5933 14121;14122 10093;10094 10093 2 51539 0 GTVLSFSVHHMR G T M R 0 1 0 0 0 0 0 1 2 0 1 0 1 1 0 2 1 0 0 2 0 0 12 0 1369.6925 REV__A6NM36 yes yes 2 0.029283 76.679 By MS/MS 3 0 1 1 555880 555880 0 + 5726 3014 5934 14123 10095 10095 1735 1 14511 0 GTVLTLMR AKKLYQEFGIRGIYKGTVLTLMRDVPASGM GIRGIYKGTVLTLMRDVPASGMYFMTYEWL K G T M R D 0 1 0 0 0 0 0 1 0 0 2 0 1 0 0 0 2 0 0 1 0 0 8 0 889.50552 O43772 O43772 171 178 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.036267 113.41 By MS/MS 8 0 1 1 0 0 0 5727 222 5935 14124 10096 10096 132 1 0 0 GTVQALHATGAR GRRVLVTGAGKGIGRGTVQALHATGARVVA IGRGTVQALHATGARVVAVSRTQADLDSLV R G T A R V 3 1 0 0 0 1 0 2 1 0 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1180.6313 Q7Z4W1 Q7Z4W1 22 33 DCXR L-xylulose reductase yes yes 2 0.00031447 147.28 By MS/MS 9 0 1 1 324110 324110 0 5728 1798 5936 14125 10097 10097 1 186010 0 GTVVAQGGGR LSRVFLALVEEVEDRGTVVAQGGGRALIPL EVEDRGTVVAQGGGRALIPLALEGTDVGQT R G T G R A 1 1 0 0 0 1 0 4 0 0 0 0 0 0 0 0 1 0 0 2 0 0 10 0 900.47773 Q9H3U1 Q9H3U1 682 691 UNC45A Protein unc-45 homolog A yes yes 2 7.6838E-05 168.26 By MS/MS 3.5 0.5 1 1 2 1085700 1085700 0 5729 2493 5937 14126;14127 10098 10098 1 29390 0 GTVVTGTLER PFLLPVEAVYSVPGRGTVVTGTLERGILKK SVPGRGTVVTGTLERGILKKGDECELLGHS R G T E R G 0 1 0 0 0 0 1 2 0 0 1 0 0 0 0 0 3 0 0 2 0 0 10 0 1031.5611 P49411 P49411 272 281 TUFM Elongation factor Tu, mitochondrial yes yes 2 1.7001E-09 195.05 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 1867200 867400 999840 5730 918 5938 14128;14129;14130;14131;14132;14133 10099;10100;10101 10100 3 529210 4743600 GTYLATFHQR ERARWTETYVRWSPKGTYLATFHQRGIALW RWSPKGTYLATFHQRGIALWGGEKFKQIQR K G T Q R G 1 1 0 0 0 1 0 1 1 0 1 0 0 1 0 0 2 0 1 0 0 0 10 0 1192.5989 P55884 P55884 346 355 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 0.00064141 155.07 By MS/MS By matching 4.67 0.745 3 2 1 5 1 7324800 7259800 64974 5731 1040 5939 14134;14135;14136;14137;14138;14139 10102;10103 10102 2 211760 135770 GTYQGLTATVLK FFHGVREIVREQGLKGTYQGLTATVLKQGS GLKGTYQGLTATVLKQGSNQAIRFFVMTSL K G T L K Q 1 0 0 0 0 1 0 2 0 0 2 1 0 0 0 0 3 0 1 1 0 0 12 0 1250.6871 P53007 P53007 179 190 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 1.9293E-16 218.07 By MS/MS By matching 5.62 3.28 1 1 1 1 2 1 1 7 1 33092000 33056000 36323 5732 996 5940 14140;14141;14142;14143;14144;14145;14146;14147 10104;10105;10106 10105 3 2514200 309880 GVAASAGSSGENKK KGTSISTKPPLTKDRGVAASAGSSGENKKA RGVAASAGSSGENKKAKPVPWVEKYRPKCV R G V K K A 3 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 0 0 0 1 0 0 14 1 1261.6262 P35249 P35249 21 34 RFC4 Replication factor C subunit 4 yes yes 2 4.9268E-16 209.8 By MS/MS 7 0 1 1 0 0 0 5733 785 5941 14148 10107 10107 1 0 0 GVAGNGAAGPAR G V A R 4 1 1 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 1 0 0 12 0 996.51009 REV__Q96GI7 yes yes 2 0.0048939 106.68 By MS/MS 5 0 1 1 69563 69563 0 + 5734 3039 5942 14149 10108 10108 1 2859.3 0 GVAINMVTEEDK NYIHRIGRGGRFGRKGVAINMVTEEDKRTL GRKGVAINMVTEEDKRTLRDIETFYNTSIE K G V D K R 1 0 1 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 12 0 1304.6282 P60842 P60842 370 381 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2 1.1592E-07 196.48 By MS/MS 4 3.55 2 2 1 1 1 7 1396600 1396600 0 5735 1074 5943;5944 14150;14151;14152;14153;14154;14155;14156 10109;10110;10111;10112;10113 10109 844 5 454960 0 GVAINMVTEEDKR NYIHRIGRGGRFGRKGVAINMVTEEDKRTL RKGVAINMVTEEDKRTLRDIETFYNTSIEE K G V K R T 1 1 1 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 13 1 1460.7293 P60842 P60842 370 382 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 1.1098E-34 270.61 By MS/MS 5.44 2.68 3 3 3 3 3 5 4 3 3 2 32 415330000 415330000 0 5736 1074 5945;5946 14157;14158;14159;14160;14161;14162;14163;14164;14165;14166;14167;14168;14169;14170;14171;14172;14173;14174;14175;14176;14177;14178;14179;14180;14181;14182;14183;14184;14185;14186;14187;14188 10114;10115;10116;10117;10118;10119;10120;10121;10122;10123;10124;10125;10126;10127;10128 10121 844 15 9089900 0 GVAPLWMR APKMYKEEGLKAFYKGVAPLWMRQIPYTMM GLKAFYKGVAPLWMRQIPYTMMKFACFERT K G V M R Q 1 1 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 1 0 0 8 0 928.49529 Q00325 Q00325 219 226 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.026013 96.048 By MS/MS 8 0 1 1 813200 813200 0 5737 1230 5947 14189 10129 10129 1001 1 53646 0 GVAQTPGSVEEDALLCGPVSK QEKYSNLVQSVLSSRGVAQTPGSVEEDALL GSVEEDALLCGPVSKHKLPNQGEDRRVPQN R G V S K H 2 0 0 1 1 1 2 3 0 0 2 1 0 0 2 2 1 0 0 3 0 0 21 0 2113.0361 Q9BQP7 Q9BQP7 64 84 MGME1 Mitochondrial genome maintenance exonuclease 1 yes yes 2 1.5347E-05 128.74 By MS/MS 8 0 1 1 1012500 1012500 0 5738 2318 5948 14190 10130 10130 1 66792 0 GVAYDVPNPVFLEQK AEDVYSRLTTPVFGKGVAYDVPNPVFLEQK GVAYDVPNPVFLEQKKMLKSGLNIAHFKQH K G V Q K K 1 0 1 1 0 1 1 1 0 0 1 1 0 1 2 0 0 0 1 3 0 0 15 0 1674.8617 Q16850 Q16850 142 156 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 1.2992E-07 191.48 By MS/MS 6.5 0.5 1 1 2 3685400 3685400 0 5739 1551 5949 14191;14192 10131 10131 1 29889 0 GVCLIDEFDK REWTLEAGALVLADRGVCLIDEFDKMNDQD VLADRGVCLIDEFDKMNDQDRTSIHEAMEQ R G V D K M 0 0 0 2 1 0 1 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1194.5591 P49736 P49736 582 591 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.00012049 163.32 By MS/MS 3.5 0.5 1 1 2 1164500 1164500 0 5740 928 5950 14193;14194 10132;10133 10133 2 31338 0 GVCSCVEAGK HHDRKNGRSSSGALRGVCSCVEAGKACDPA SGALRGVCSCVEAGKACDPAARQFNTLIPW R G V G K A 1 0 0 0 2 0 1 2 0 0 0 1 0 0 0 1 0 0 0 2 0 0 10 0 1065.4583 P26358 P26358 1474 1483 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.00095041 125.16 By MS/MS 2.5 0.5 1 1 2 380140 380140 0 5741 693 5951 14195;14196 10134 10134 1 16224 0 GVCTEAGMYALR KIAELMPGASGAEVKGVCTEAGMYALRERR EVKGVCTEAGMYALRERRVHVTQEDFEMAV K G V L R E 2 1 0 0 1 0 1 2 0 0 1 0 1 0 0 0 1 0 1 1 0 0 12 0 1326.606 P62195 P62195 361 372 PSMC5 26S protease regulatory subunit 8 yes yes 2 2.481E-06 176.38 By MS/MS 7 0 1 1 1244300 1244300 0 5742 1117 5952 14197 10135 10135 1 22236 0 GVDEVTIVNILTNR AERDALNIETAIKTKGVDEVTIVNILTNRS KGVDEVTIVNILTNRSNAQRQDIAFAYQRR K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 P07355 P07355 50 63 ANXA2 Annexin A2 yes yes 2 8.8929E-05 149.49 By MS/MS 8 0 1 1 185890 185890 0 5743 488 5953 14198 10136 10136 1 12263 0 GVDLQENNPASR KNEPQNATGAPGRNRGVDLQENNPASRSQC RNRGVDLQENNPASRSQCCSN_________ R G V S R S 1 1 2 1 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 12 0 1298.6215 P51148 P51148 199 210 RAB5C Ras-related protein Rab-5C yes yes 2 0.00068087 136.96 By MS/MS By matching 9 0 2 1 1 3174700 3124600 50125 5744 959 5954 14199;14200 10137 10137 1 1793200 540200 GVDLTEPTQPTR KNEPQNPGANSARGRGVDLTEPTQPTRNQC RGRGVDLTEPTQPTRNQCCSN_________ R G V T R N 0 1 0 1 0 1 1 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 0 1312.6623 P20339 P20339 198 209 RAB5A Ras-related protein Rab-5A yes yes 2 8.3302E-11 197.21 By MS/MS 9 0 1 1 773720 773720 0 5745 640 5955 14201 10138 10138 1 444050 0 GVDLVLNSLAEEK DTSFEQHVLWHTGGKGVDLVLNSLAEEKLQ GKGVDLVLNSLAEEKLQASVRCLATHGRFL K G V E K L 1 0 1 1 0 0 2 1 0 0 3 1 0 0 0 1 0 0 0 2 0 0 13 0 1385.7402 P49327 P49327 1740 1752 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.4161E-35 263.07 By MS/MS 3.57 1.59 1 1 1 2 1 1 7 18270000 18270000 0 5746 915 5956 14202;14203;14204;14205;14206;14207;14208 10139;10140;10141;10142;10143;10144 10140 6 671740 0 GVEGLIDIENPNR DESEDEEDDYQQKRKGVEGLIDIENPNRVA RKGVEGLIDIENPNRVAQTTKKVTQLDLDG K G V N R V 0 1 2 1 0 0 2 2 0 2 1 0 0 0 1 0 0 0 0 1 0 0 13 0 1424.726 Q13442 Q13442 76 88 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 9.2367E-05 155.53 By MS/MS 8.5 0.5 1 1 2 1408500 1408500 0 5747 1370 5957 14209;14210 10145 10145 1 234490 0 GVEQNHQR QAQVGLGQLHLHGGRGVEQNHQRAFDYFNL LHLHGGRGVEQNHQRAFDYFNLAANAGNSH R G V Q R A 0 1 1 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 966.46314 Q9UBV2 Q9UBV2 389 396 SEL1L Protein sel-1 homolog 1 yes yes 2 0.008595 123.69 By MS/MS 4 0 1 1 161160 161160 0 5748 2758 5958 14211 10146 10146 1 4399.6 0 GVETIANDVVSLATK PAGLITPIVFNAHIKGVETIANDVVSLATK GVETIANDVVSLATKAREGKLQPHEFQGGT K G V T K A 2 0 1 1 0 0 1 1 0 1 1 1 0 0 0 1 2 0 0 3 0 0 15 0 1515.8144 P10515 P10515 533 547 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 9.4151E-15 246.51 By MS/MS 5.5 0.5 1 1 2 1160700 1160700 0 5749 538 5959 14212;14213 10147;10148 10147 2 23006 0 GVFVNVEK ERRGDLDKAYTKLIRGVFVNVEKVANESQK AYTKLIRGVFVNVEKVANESQKTPRDVVMM R G V E K V 0 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 3 0 0 8 0 890.48617 Q9NV70 Q9NV70 708 715 EXOC1 Exocyst complex component 1 yes yes 2 0.0026636 152.47 By MS/MS 4 0 1 1 503210 503210 0 5750 2645 5960 14214 10149 10149 1 13737 0 GVFVVAAK ______________________________ ______________________________ R G V A K R 2 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 3 0 0 8 0 789.47487 P42765 P42765 6 13 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 0.010363 119.22 By MS/MS 7 0 1 1 2468400 2468400 0 5751 855 5961 14215 10150 10150 1 44111 0 GVGAEPLLPWNR WRGPPPLFQQQRFDRGVGAEPLLPWNRMLQ FDRGVGAEPLLPWNRMLQTQNAAFQPNQYQ R G V N R M 1 1 1 0 0 0 1 2 0 0 2 0 0 0 2 0 0 1 0 1 0 0 12 0 1307.6986 Q9H0D6 Q9H0D6 884 895 XRN2 5-3 exoribonuclease 2 yes yes 2 0.005161 123.86 By MS/MS 4 0 1 1 309820 309820 0 5752 2453 5962 14216 10151 10151 1 8457.7 0 GVGAIYIR IDLMSISGHKIYGPKGVGAIYIRRRPRVRV HKIYGPKGVGAIYIRRRPRVRVEALQSGGG K G V I R R 1 1 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 1 1 0 0 8 0 847.49159 Q9Y697 Q9Y697 264 271 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 0.0077949 126.68 By MS/MS 7 0 1 1 1585500 1585500 0 5753 2998 5963 14217 10152 10152 1 28334 0 GVGIISEGNETVEDIAAR MVTGDHPITAKAIAKGVGIISEGNETVEDI IISEGNETVEDIAARLNIPVSQVNPRDAKA K G V A R L 2 1 1 1 0 0 3 3 0 3 0 0 0 0 0 1 1 0 0 2 0 0 18 0 1828.9167 P05023;P50993;P13637 P05023 630 647 ATP1A1;ATP1A2;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2;3 1.5488E-134 374.82 By MS/MS 3.1 1.58 2 2 2 2 1 1 10 40037000 40037000 0 5754 463;575 5964 14218;14219;14220;14221;14222;14223;14224;14225;14226;14227 10153;10154;10155;10156;10157;10158;10159;10160 10153 7 1192300 0 GVGTESGSESGSSNAKEPK ESHFLRVFLFFRPFRGVGTESGSESGSSNA ESGSESGSSNAKEPKTRAGGFASALERHSE R G V P K T 1 0 1 0 0 0 3 4 0 0 0 2 0 0 1 5 1 0 0 1 0 0 19 1 1806.8232 Q9Y2Q9 Q9Y2Q9 28 46 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2;3 0.0030253 109.6 By MS/MS By matching 9.25 0.433 3 1 3 1 1207000 1201800 5192.5 5755 2896 5965 14228;14229;14230;14231 10161;10162;10163 10161 3 748690 55960 GVGVFGDMAQDTGIPADIWR TEYLNYEDGKFSKSRGVGVFGDMAQDTGIP GDMAQDTGIPADIWRFYLLYIRPEGQDSAF R G V W R F 2 1 0 3 0 1 0 4 0 2 0 0 1 1 1 0 1 1 0 2 0 0 20 0 2104.0048 P56192 P56192 599 618 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.001135 95.57 By MS/MS 4 0 1 1 202670 202670 0 5756 1042 5966 14232 10164 10164 812 1 5532.7 0 GVIDLIFEK KQVTQLAIDTEERLKGVIDLIFEKAISEPN TEERLKGVIDLIFEKAISEPNFSVAYANMC K G V E K A 0 0 0 1 0 0 1 1 0 2 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1032.5855 Q04637 Q04637 796 804 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00038908 161.02 By MS/MS 3 1.41 1 1 1 1 1 5 3938100 3938100 0 5757 1264 5967 14233;14234;14235;14236;14237 10165;10166;10167;10168 10165 4 130900 0 GVIDLVFEK KQVSGLTVDTEERLKGVIDLVFEKAIDEPS TEERLKGVIDLVFEKAIDEPSFSVAYANMC K G V E K A 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 0 0 0 0 2 0 0 9 0 1018.5699 O43432 O43432 790 798 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0029682 120.15 By MS/MS 3 0.816 1 1 1 3 413410 413410 0 5758 200 5968 14238;14239;14240 10169;10170 10169 2 14843 0 GVIFTEAFVAR RLGRIISGHIDLDNRGVIFTEAFVARHKAR LDNRGVIFTEAFVARHKARIRGLFSAITRP R G V A R H 2 1 0 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 0 2 0 0 11 0 1208.6554 O94874 O94874 175 185 UFL1 E3 UFM1-protein ligase 1 yes yes 2 8.1105E-05 164.68 By MS/MS 4 0.816 1 1 1 3 404660 404660 0 5759 354 5969 14241;14242;14243 10171 10171 1 15294 0 GVIFYLR PAVPQAPVQGEDYGKGVIFYLRDKVVVGIV VQGEDYGKGVIFYLRDKVVVGIVLWNIFNR K G V L R D 0 1 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 1 1 0 0 7 0 866.50142 O95831 O95831 563 569 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.013654 143.88 By MS/MS 5.5 0.5 1 1 2 2132800 2132800 0 5760 409 5970 14244;14245 10172 10172 1 69361 0 GVILLIVDK LELLNVGVESKLILKGVILLIVDKALEEPK SKLILKGVILLIVDKALEEPKYSSLYAQLC K G V D K A 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 0 0 0 0 2 0 0 9 0 968.62702 P78344 P78344 113 121 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0033715 119.27 By MS/MS 4.5 0.5 1 1 2 791600 791600 0 5761 1192 5971 14246;14247 10173 10173 1 22696 0 GVINIIPGSGGIAGQR ALKFAELSVKAGFPKGVINIIPGSGGIAGQ VINIIPGSGGIAGQRLSEHPDIRKLGFTGS K G V Q R L 1 1 1 0 0 1 0 5 0 4 0 0 0 0 1 1 0 0 0 1 0 0 16 0 1507.8471 Q3SY69 Q3SY69 642 657 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 5.4892E-10 176.87 By MS/MS 4.5 0.5 1 1 2 2278900 2278900 0 5762 1570 5972 14248;14249 10174 10174 1 65989 0 GVINQLAFGIDK LMFTSKSEALLLKIRGVINQLAFGIDKSKS KIRGVINQLAFGIDKSKSICVDQNKPLFIT R G V D K S 1 0 1 1 0 1 0 2 0 2 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1273.703 Q8TCX1 Q8TCX1 232 243 DYNC2LI1 Cytoplasmic dynein 2 light intermediate chain 1 yes yes 2 5.0966E-13 211.64 By MS/MS 7 0 1 1 0 0 0 5763 1998 5973 14250 10175 10175 1 0 0 GVISTPVIR LQVVSVGGPARGRPRGVISTPVIRTFGRGG ARGRPRGVISTPVIRTFGRGGRYYGRGYKN R G V I R T 0 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 1 0 0 2 0 0 9 0 940.57057 Q9NZB2 Q9NZB2 987 995 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 0.047116 82.241 By MS/MS 3 0 1 1 917720 917720 0 5764 2709 5974 14251 10176 10176 1 23957 0 GVITMNEEYETR LRSLTRQLVQDENVRGVITMNEEYETRFLC NVRGVITMNEEYETRFLCNSSQEWKRLGVE R G V T R F 0 1 1 0 0 0 3 1 0 1 0 0 1 0 0 0 2 0 1 1 0 0 12 0 1440.6555 Q8WUK0 Q8WUK0 67 78 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 1.2811E-56 310.53 By MS/MS 9 0 2 2 1782000 1782000 0 5765 2017 5975;5976 14252;14253 10177;10178 10178 1320 2 1022700 0 GVITVKDGK IGNIISDAMKKVGRKGVITVKDGKTLNDEL KKVGRKGVITVKDGKTLNDELEIIEGMKFD K G V G K T 0 0 0 1 0 0 0 2 0 1 0 2 0 0 0 0 1 0 0 2 0 0 9 1 915.53893 P10809 P10809 197 205 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.015429 133.58 By MS/MS 6 0 2 2 9350100 9350100 0 5766 544 5977 14254;14255 10179;10180 10179 2 72913 0 GVIVDKDFSHPQMPK EGKVGGRLEDTKLIKGVIVDKDFSHPQMPK GVIVDKDFSHPQMPKKVEDAKIAILTCPFE K G V P K K 0 0 0 2 0 1 0 1 1 1 0 2 1 1 2 1 0 0 0 2 0 0 15 1 1696.8607 P48643 P48643 227 241 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.00095371 163.71 By MS/MS 6.14 0.99 2 3 1 1 7 58159000 58159000 0 5767 909 5978;5979 14256;14257;14258;14259;14260;14261;14262 10181;10182;10183 10183 646 3 507430 0 GVIVVEVEDR GGVMAVGARHSFDKKGVIVVEVEDREKKAV SFDKKGVIVVEVEDREKKAVNLERALEMAI K G V D R E 0 1 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 4 0 0 10 0 1113.603 Q9BSH4 Q9BSH4 187 196 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2 0.024125 105.4 By MS/MS 9 0 1 1 0 0 0 5768 2337 5980 14263 10184 10184 1 0 0 GVIVVEVEDREKK GGVMAVGARHSFDKKGVIVVEVEDREKKAV KKGVIVVEVEDREKKAVNLERALEMAIEAG K G V K K A 0 1 0 1 0 0 3 1 0 1 0 2 0 0 0 0 0 0 0 4 0 0 13 2 1498.8355 Q9BSH4 Q9BSH4 187 199 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2 0.039395 133.91 By MS/MS 8 0 1 1 657180 657180 0 5769 2337 5981 14264 10185 10185 1 43354 0 GVLFASGQNLAR SAKLYGSGDQEAWQKGVLFASGQNLARQLM WQKGVLFASGQNLARQLMETPANEMTPTRF K G V A R Q 2 1 1 0 0 1 0 2 0 0 2 0 0 1 0 1 0 0 0 1 0 0 12 0 1231.6673 P28838 P28838 189 200 LAP3 Cytosol aminopeptidase yes yes 2 5.6464E-07 178.84 By MS/MS 6.5 0.5 1 1 2 11180000 11180000 0 5770 722 5982 14265;14266 10186;10187 10186 2 94604 0 GVLFFSTPR TGAQGLREEVHTMLRGVLFFSTPRTFQEMI VHTMLRGVLFFSTPRTFQEMIQRLYGCFLR R G V P R T 0 1 0 0 0 0 0 1 0 0 1 0 0 2 1 1 1 0 0 1 0 0 9 0 1022.5549 Q9UJX6 Q9UJX6 159 167 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 0.0096518 105.57 By MS/MS 4 0 1 1 207600 207600 0 5771 2805 5983 14267 10188 10188 1 5667.2 0 GVLFYGPPGCGK EHPDKFLKFGMTPSKGVLFYGPPGCGKTLL PSKGVLFYGPPGCGKTLLAKAIANECQANF K G V G K T 0 0 0 0 1 0 0 4 0 0 1 1 0 1 2 0 0 0 1 1 0 0 12 0 1250.6118 P55072 P55072 513 524 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.0020372 130.27 By MS/MS By matching 4.33 0.471 2 1 2 1 7107200 7071800 35375 5772 1026 5984 14268;14269;14270 10189;10190 10190 2 213570 73919 GVLHQFSGTETNK YKDVAKPVIELYKSRGVLHQFSGTETNKIW SRGVLHQFSGTETNKIWPYVYTLFSNKITP R G V N K I 0 0 1 0 0 1 1 2 1 0 1 1 0 1 0 1 2 0 0 1 0 0 13 0 1416.6997 P27144 P27144 189 201 AK4 Adenylate kinase 4, mitochondrial yes yes 3 0.0019766 115.34 By MS/MS 8 0 1 1 2968400 2968400 0 5773 702 5985 14271 10191 10191 1 195820 0 GVLLAGPPGVGK RYPRALTALGLAVPRGVLLAGPPGVGKTQL VPRGVLLAGPPGVGKTQLVRAVAREAGAEL R G V G K T 1 0 0 0 0 0 0 4 0 0 2 1 0 0 2 0 0 0 0 2 0 0 12 0 1063.639 Q9BVQ7 Q9BVQ7 236 247 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 0.012431 94.302 By MS/MS 5 0 1 1 499780 499780 0 5774 2382 5986 14272 10192 10192 1 20543 0 GVLLDIDDLQTNQFK RAKPVKYTAAKLHEKGVLLDIDDLQTNQFK GVLLDIDDLQTNQFKNVTFDIIATEDVGIF K G V F K N 0 0 1 3 0 2 0 1 0 1 3 1 0 1 0 0 1 0 0 1 0 0 15 0 1717.8887 Q13576 Q13576 1490 1504 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 8.932E-22 232.56 By MS/MS 3 0 1 1 360410 360410 0 5775 1383 5987 14273 10193;10194 10193 2 9408.5 0 GVLLLGDAYNMR SMPASFLPPSSVKKRGVLLLGDAYNMRHPL KKRGVLLLGDAYNMRHPLTGGGMTVAFKDI R G V M R H 1 1 1 1 0 0 0 2 0 0 3 0 1 0 0 0 0 0 1 1 0 0 12 0 1320.686 Q14534 Q14534 402 413 SQLE Squalene monooxygenase yes yes 2 0.013066 86.882 By MS/MS 1 0 1 1 231200 231200 0 5776 1434 5988 14274 10195 10195 1126 1 11296 0 GVLLYGPPGTGK KHPELFEALGIAQPKGVLLYGPPGTGKTLL QPKGVLLYGPPGTGKTLLARAVAHHTDCTF K G V G K T 0 0 0 0 0 0 0 4 0 0 2 1 0 0 2 0 1 0 1 1 0 0 12 0 1157.6445 Q8NB90;P62195 P62195 185 196 SPATA5;PSMC5 Spermatogenesis-associated protein 5;26S protease regulatory subunit 8 no no 2 0.00046993 139.98 By MS/MS 7 0.707 1 2 1 4 29227000 29227000 0 5777 1117;1939 5989 14275;14276;14277;14278 10196;10197;10198 10197 3 465910 0 GVLPCKLK FSDLIQLVDFYQLNKGVLPCKLKHHCIRVA DFYQLNKGVLPCKLKHHCIRVAL_______ K G V L K H 0 0 0 0 1 0 0 1 0 0 2 2 0 0 1 0 0 0 0 1 0 0 8 1 913.54191 Q13322;Q14449 Q13322 579 586 GRB10;GRB14 Growth factor receptor-bound protein 10;Growth factor receptor-bound protein 14 yes no 3 0.011891 100.74 By MS/MS 7 0 1 1 436750 0 436750 5778 1355 5990 14279 10199 10199 1 0 1792900 GVLQTAAER PELFHQLMLWKGDLKGVLQTAAERGELTDN WKGDLKGVLQTAAERGELTDNLVAMAPAAG K G V E R G 2 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 943.50869 Q8TEQ6 Q8TEQ6 934 942 GEMIN5 Gem-associated protein 5 yes yes 2 0.0028989 120.31 By MS/MS 3 1.41 1 1 1 1 1 5 1475700 1475700 0 5779 2003 5991 14280;14281;14282;14283;14284 10200 10200 1 42564 0 GVMINKDVTHPR EKIPGGIIEDSCVLRGVMINKDVTHPRMRR VLRGVMINKDVTHPRMRRYIKNPRIVLLDS R G V P R M 0 1 1 1 0 0 0 1 1 1 0 1 1 0 1 0 1 0 0 2 0 0 12 1 1365.7187 P49368 P49368 217 228 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.00213 107.09 By MS/MS By matching 6.33 0.471 2 1 2 1 8738600 8725800 12861 5780 916 5992 14285;14286;14287 10201 10201 670 1 79901 39444 GVMLAVDAVIAELK FEKISKGANPVEIRRGVMLAVDAVIAELKK RGVMLAVDAVIAELKKQSKPVTTPEEIAQV R G V L K K 3 0 0 1 0 0 1 1 0 1 2 1 1 0 0 0 0 0 0 3 0 0 14 0 1427.8058 P10809 P10809 143 156 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 1.8916E-08 190.15 By MS/MS 6 0 2 2 813600 813600 0 5781 544 5993;5994 14288;14289 10202;10203;10204 10202 324 3 6344.5 0 GVMLAVDAVIAELKK FEKISKGANPVEIRRGVMLAVDAVIAELKK GVMLAVDAVIAELKKQSKPVTTPEEIAQVA R G V K K Q 3 0 0 1 0 0 1 1 0 1 2 2 1 0 0 0 0 0 0 3 0 0 15 1 1555.9008 P10809 P10809 143 157 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 1.124E-13 197.31 By MS/MS 6 0 3 3 15080000 15080000 0 5782 544 5995;5996 14290;14291;14292 10205;10206;10207;10208 10206 324 4 117600 0 GVNCIDYYSGGDKPYLISGADDR LGSSSPNFTLEGHEKGVNCIDYYSGGDKPY SGGDKPYLISGADDRLVKIWDYQNKTCVQT K G V D R L 1 1 1 4 1 0 0 4 0 2 1 1 0 0 1 2 0 0 3 1 0 0 23 1 2534.1384 P35606 P35606 187 209 COPB2 Coatomer subunit beta yes yes 3 0.0025072 70.352 By MS/MS 1 0 1 1 184090 184090 0 5783 795 5997 14293 10209 10209 1 8994.4 0 GVNEDTYSGILDCAR NPCDVVKTRLQSLQRGVNEDTYSGILDCAR GVNEDTYSGILDCARKILRHEGPSAFLKGA R G V A R K 1 1 1 2 1 0 1 2 0 1 1 0 0 0 0 1 1 0 1 1 0 0 15 0 1668.7413 Q9H936 Q9H936 259 273 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 7.7151E-92 328.43 By MS/MS By matching 8 0 2 1 1 17181000 17159000 21659 5784 2528 5998 14294;14295 10210 10210 1 1132000 184780 GVNEDTYSGILDCARK NPCDVVKTRLQSLQRGVNEDTYSGILDCAR VNEDTYSGILDCARKILRHEGPSAFLKGAY R G V R K I 1 1 1 2 1 0 1 2 0 1 1 1 0 0 0 1 1 0 1 1 0 0 16 1 1796.8363 Q9H936 Q9H936 259 274 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 6.7359E-07 164.53 By MS/MS 8 0 1 1 832680 832680 0 5785 2528 5999 14296 10211 10211 1 54932 0 GVNKEFTVNIMDTCER PQEYFMELTFNQAAKGVNKEFTVNIMDTCE VNKEFTVNIMDTCERCNGKGNEPGTKVQHC K G V E R C 0 1 2 1 1 0 2 1 0 1 0 1 1 1 0 0 2 0 0 2 0 0 16 1 1911.8819 Q96EY1 Q96EY1 223 238 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 3 0.0023265 104.26 By MS/MS 7 0 1 1 3302300 3302300 0 5786 2169 6000 14297 10212 10212 1395 1 59012 0 GVNLPGAAVDLPAVSEK LVTEVENGGSLGSKKGVNLPGAAVDLPAVS NLPGAAVDLPAVSEKDIQDLKFGVEQDVDM K G V E K D 3 0 1 1 0 0 1 2 0 0 2 1 0 0 2 1 0 0 0 3 0 0 17 0 1635.8832 P14618 P14618 208 224 PKM Pyruvate kinase PKM yes yes 2 1.4148E-13 179.5 By MS/MS 6.5 0.5 1 1 2 2065800 2065800 0 5787 588 6001 14298;14299 10213;10214 10214 2 19698 0 GVNTFSPEGR ______________________________ SEYDRGVNTFSPEGRLFQVEYAIEAIKLGS R G V G R L 0 1 1 0 0 0 1 2 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 P28066 P28066 11 20 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.0019183 117.53 By MS/MS 8 0 1 1 5922000 5922000 0 5788 712 6002 14300 10215 10215 1 390670 0 GVNTVFHCASPPPSSNNK LGDLCSRQDLYPALKGVNTVFHCASPPPSS TVFHCASPPPSSNNKELFYRVNYIGTKNVI K G V N K E 1 0 3 0 1 0 0 1 1 0 0 1 0 1 3 3 1 0 0 2 0 0 18 0 1911.8897 Q15738 Q15738 97 114 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3 0.0059975 70.235 By MS/MS 7 0 1 1 2401100 2401100 0 5789 1515 6003 14301 10216 10216 1 42908 0 GVPLVYEAFNWR GVPIDAIIFGGRRPKGVPLVYEAFNWRHGV RPKGVPLVYEAFNWRHGVFVGSAMRSESTA K G V W R H 1 1 1 0 0 0 1 1 0 0 1 0 0 1 1 0 0 1 1 2 0 0 12 0 1449.7405 Q16822 Q16822 458 469 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 8.0238E-05 159.4 By MS/MS 6 0 1 1 1087300 1087300 0 5790 1550 6004 14302 10217 10217 1 8479.2 0 GVPTGFILPIR MAKTHLSLSHNPEQKGVPTGFILPIRDIRA PEQKGVPTGFILPIRDIRASVGAGFLYPLV K G V I R D 0 1 0 0 0 0 0 2 0 2 1 0 0 1 2 0 1 0 0 1 0 0 11 0 1168.6968 P11586 P11586 879 889 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0059974 103.55 By MS/MS 5.5 1.12 1 1 1 1 4 2579600 2579600 0 5791 556 6005 14303;14304;14305;14306 10218 10218 1 66895 0 GVQFALK TVDMTGIPTLDNLQKGVQFALKYQSLGQCV PTLDNLQKGVQFALKYQSLGQCVYVHCKAG K G V L K Y 1 0 0 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 761.44357 Q8WUK0 Q8WUK0 114 120 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.017697 132.72 By MS/MS 9 0 1 1 1182400 1182400 0 5792 2017 6006 14307 10219 10219 1 678580 0 GVQFAPFSTCR CRNVKERITRECKEKGVQFAPFSTCRVTQT CKEKGVQFAPFSTCRVTQTYDAGACIYFYF K G V C R V 1 1 0 0 1 1 0 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 11 0 1268.5972 O00116 O00116 556 566 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 0.019913 84.507 By MS/MS 5 0 1 1 2372600 2372600 0 5793 67 6007 14308 10220 10220 1 97522 0 GVQHPLR QSRKDILKDLVEMCRGVQHPLRGLFLRNYL KDLVEMCRGVQHPLRGLFLRNYLLQCTRNI R G V L R G 0 1 0 0 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 1 0 0 7 0 805.45587 Q96QK1 Q96QK1 139 145 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.044015 105.27 By MS/MS 5.5 0.5 1 1 2 1245500 1245500 0 5794 2242 6008 14309;14310 10221 10221 1 26244 0 GVQLDSAGLER LGLPLDMVELMLEEKGVQLDSAGLERLAQE LEEKGVQLDSAGLERLAQEEAQHRARQAEP K G V E R L 1 1 0 1 0 1 1 2 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1143.5884 Q5JTZ9 Q5JTZ9 461 471 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.00017754 168.22 By MS/MS 5 0.816 1 1 1 3 8054700 8054700 0 5795 1611 6009 14311;14312;14313 10222 10222 1 220150 0 GVQQDEALQLPK ATYESVLFHQLQEIKGVQQDEALQLPKDLD EIKGVQQDEALQLPKDLDYLTIRDVSLSHE K G V P K D 1 0 0 1 0 3 1 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 12 0 1324.6987 Q9Y2Z2 Q9Y2Z2 626 637 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 7.3984E-05 160.77 By MS/MS 5 0 1 1 1738300 1738300 0 5796 2908 6010 14314 10223 10223 1 71450 0 GVQVETISPGDGR ______________________________ ______________________________ M G V G R T 0 1 0 1 0 1 1 3 0 1 0 0 0 0 1 1 1 0 0 2 0 0 13 0 1313.6575 P62942 P62942 2 14 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 2 0.0031197 113.67 By MS/MS 10 0 1 1 153250 153250 0 5797 1164 6011 14315 10224 10224 1 162890 0 GVQYLNEIK GPDGTGPNILTDITKGVQYLNEIKDSVVAG LTDITKGVQYLNEIKDSVVAGFQWATKEGA K G V I K D 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 9 0 1062.571 P13639 P13639 668 676 EEF2 Elongation factor 2 yes yes 2 0.0047016 116.37 By MS/MS 4.5 0.5 1 1 2 3850900 3850900 0 5798 576 6012 14316;14317 10225 10225 1 114130 0 GVSAAGQVVSLK DMRKMSFQRCARTDKGVSAAGQVVSLKVWL TDKGVSAAGQVVSLKVWLIDDILEKINSHL K G V L K V 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1114.6346 Q9Y606 Q9Y606 148 159 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 5.9654E-05 163.9 By MS/MS 7 0 1 1 1864200 1864200 0 5799 2992 6013 14318 10226 10226 1 33313 0 GVSAVVVGADR TLITDSMVAAAMAHRGVSAVVVGADRVVAN MAHRGVSAVVVGADRVVANGDTANKVGTYQ R G V D R V 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 4 0 0 11 0 1028.5615 Q9BV20 Q9BV20 239 249 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 0.00037682 147.75 By MS/MS 7.5 0.5 1 1 2 5733400 5733400 0 5800 2369 6014 14319;14320 10227 10227 1 111470 0 GVSINQFCK LAMPGPPLGPVLGQRGVSINQFCKEFNERT PVLGQRGVSINQFCKEFNERTKDIKEGIPL R G V C K E 0 0 1 0 1 1 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1051.5121 Q9Y3B7 Q9Y3B7 43 51 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 3.3357E-06 183.74 By MS/MS 9 0 1 1 2008800 2008800 0 5801 2927 6015 14321 10228 10228 1 1152900 0 GVSLTAQR FMNIYQQEGTRGLWKGVSLTAQRAAIVVGV GTRGLWKGVSLTAQRAAIVVGVELPVYDIT K G V Q R A 1 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 830.46102 Q5SVS4 Q5SVS4 164 171 SLC25A30 Kidney mitochondrial carrier protein 1 yes yes 2 0.0053588 135.77 By MS/MS 7.5 0.5 1 1 2 1320600 1320600 0 5802 1620 6016 14322;14323 10229 10229 1 73512 0 GVSSQETAGIGASAHLVNFK NLDGLEYKLHDFGYRGVSSQETAGIGASAH ETAGIGASAHLVNFKGTDTVAGLALIKKYY R G V F K G 3 0 1 0 0 1 1 3 1 1 1 1 0 1 0 3 1 0 0 2 0 0 20 0 1972.0014 P43490 P43490 197 216 NAMPT Nicotinamide phosphoribosyltransferase yes yes 2;3 1.2992E-12 174.47 By MS/MS 6 0 2 2 6489100 6489100 0 5803 866 6017 14324;14325 10230;10231 10231 2 50603 0 GVTDHTQR LDIYHNVLYENPNLKGVTDHTQRLSIITKD YENPNLKGVTDHTQRLSIITKDLFQVAFNR K G V Q R L 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 912.44134 Q14204 Q14204 3848 3855 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00077635 176.41 By MS/MS 1.5 0.5 1 1 2 1598700 1598700 0 5804 1421 6018 14326;14327 10232;10233 10233 2 78488 0 GVTEAIQNFSFR DTENMNSEDIYSSLRGVTEAIQNFSFRSQE SLRGVTEAIQNFSFRSQEDMNEPLKRDSKK R G V F R S 1 1 1 0 0 1 1 1 0 1 0 0 0 2 0 1 1 0 0 1 0 0 12 0 1367.6834 O75122 O75122 943 954 CLASP2 CLIP-associating protein 2 yes yes 2 0.0007386 148.28 By MS/MS 3 0 1 1 382540 382540 0 5805 279 6019 14328 10234 10234 1 9986.3 0 GVTIIGPATVGGIK PEALTRKLIKKADQKGVTIIGPATVGGIKP KGVTIIGPATVGGIKPGCFKIGNTGGMLDN K G V I K P 1 0 0 0 0 0 0 4 0 3 0 1 0 0 1 0 2 0 0 2 0 0 14 0 1281.7656 P53396 P53396 617 630 ACLY ATP-citrate synthase yes yes 2 5.5087E-05 164.33 By MS/MS 4 0 1 1 447720 447720 0 5806 1001 6020 14329 10235 10235 1 12222 0 GVTIQPLKR DPSQPIDLTQLVNGRGVTIQPLKRDYGVQL QLVNGRGVTIQPLKRDYGVQLVEEGADTFT R G V K R D 0 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 9 1 1010.6237 Q9P015 Q9P015 126 134 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 3 0.024902 81.525 By MS/MS 3 0.816 1 1 1 3 608070 608070 0 5807 2721 6021 14330;14331;14332 10236 10236 1 23165 0 GVTSILPVLR ESKGEHVPGFCLPKKGVTSILPVLREGVLT CLPKKGVTSILPVLREGVLTGSPEQKEEAA K G V L R E 0 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 1 0 0 2 0 0 10 0 1053.6546 Q92616 Q92616 2260 2269 GCN1L1 Translational activator GCN1 yes yes 2 0.019886 92.439 By MS/MS 2.5 0.5 1 1 2 188190 188190 0 5808 2068 6022 14333;14334 10237 10237 1 7916.3 0 GVTYSLESFLGPR LNFGQVKNCEVEQVKGVTYSLESFLGPRMC VKGVTYSLESFLGPRMCTEDLPFPPAASCD K G V P R M 0 1 0 0 0 0 1 2 0 0 2 0 0 1 1 2 1 0 1 1 0 0 13 0 1424.73 Q9UG56 Q9UG56 210 222 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.00036323 139.43 By MS/MS 8 0 1 1 121870 121870 0 5809 2770 6023 14335 10238 10238 1 8040 0 GVVCIDEFDK GERRLEAGAMVLADRGVVCIDEFDKMSDMD VLADRGVVCIDEFDKMSDMDRTAIHEVMEQ R G V D K M 0 0 0 2 1 0 1 1 0 1 0 1 0 1 0 0 0 0 0 2 0 0 10 0 1180.5434 P25205 P25205 404 413 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.020444 92.051 By MS/MS 4.5 0.5 1 1 2 843430 843430 0 5810 683 6024 14336;14337 10239 10239 1 25243 0 GVVDRLEVVNKR REITWKDFVNNYLSKGVVDRLEVVNKRFVR LSKGVVDRLEVVNKRFVRVTFTPGKTPVDG K G V K R F 0 2 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 12 2 1382.7994 Q9Y4W6 Q9Y4W6 183 194 AFG3L2 AFG3-like protein 2 yes yes 3 0.044179 70.089 By MS/MS 5 0 1 1 1222000 1222000 0 5811 2960 6025 14338 10240 10240 1 50229 0 GVVDSDDLPLNVSR DDFHDMMPKYLNFVKGVVDSDDLPLNVSRE KGVVDSDDLPLNVSRETLQQHKLLKVIRKK K G V S R E 0 1 1 3 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 14 0 1484.7471 P14625 P14625 435 448 HSP90B1 Endoplasmin yes yes 2 1.7336E-25 234.24 By MS/MS By matching 4 2.14 2 2 1 1 1 6 1 31032000 30929000 102910 5812 589 6026 14339;14340;14341;14342;14343;14344;14345 10241;10242;10243;10244 10243 4 833430 215030 GVVDSEDLPLNISR DSCDELIPEYLNFIRGVVDSEDLPLNISRE RGVVDSEDLPLNISREMLQQSKILKVIRKN R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P07900;P08238 P08238 379 392 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2;3 4.1381E-35 259.18 By MS/MS By MS/MS 4.23 1.53 1 1 1 4 4 1 1 12 1 330650000 330580000 62918 5813 501;494 6027 14346;14347;14348;14349;14350;14351;14352;14353;14354;14355;14356;14357;14358 10245;10246;10247;10248;10249;10250;10251;10252;10253;10254;10255;10256;10257;10258;10259 10247 15 10225000 186170 GVVDSEDLPLNISREMLQQSK DSCDELIPEYLNFIRGVVDSEDLPLNISRE DLPLNISREMLQQSKILKVIRKNIVKKCLE R G V S K I 0 1 1 2 0 2 2 1 0 1 3 1 1 0 1 3 0 0 0 2 0 0 21 1 2357.1897 P07900;P08238 P08238 379 399 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 3 0.011695 61.648 By MS/MS 4 0 1 1 611990 611990 0 5814 501;494 6028 14359 10260 10260 293 1 16707 0 GVVEVTHDLQK MGKMQKKAVAISLPKGVVEVTHDLQKHLAG SLPKGVVEVTHDLQKHLAGLGLTEAIDKNK K G V Q K H 0 0 0 1 0 1 1 1 1 0 1 1 0 0 0 0 1 0 0 3 0 0 11 0 1223.651 P50454 P50454 309 319 SERPINH1 Serpin H1 yes yes 2;3 1.5809E-10 218.58 By MS/MS 7.17 1.07 2 2 1 1 6 40841000 40841000 0 5815 947 6029 14360;14361;14362;14363;14364;14365 10261;10262;10263;10264 10262 4 773840 0 GVVLCTFTR PPRKLGPTEGRPQLKGVVLCTFTRKPKKPN GRPQLKGVVLCTFTRKPKKPNSANRKCCRV K G V T R K 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 2 0 0 9 0 1051.5485 O15235 O15235 60 68 MRPS12 28S ribosomal protein S12, mitochondrial yes yes 2 0.007566 110.12 By MS/MS 10 0 1 1 912760 912760 0 5816 161 6030 14366 10265 10265 1 970170 0 GVVPLAGTDGETTTQGLDGLSER TIQDKGIVVGIKVDKGVVPLAGTDGETTTQ DGETTTQGLDGLSERCAQYKKDGADFAKWR K G V E R C 1 1 0 2 0 1 2 5 0 0 3 0 0 0 1 1 4 0 0 2 0 0 23 0 2272.1183 P09972 P09972 112 134 ALDOC Fructose-bisphosphate aldolase C yes yes 2 3.3631E-15 161.19 By MS/MS 7 0 1 1 2480600 2480600 0 5817 524 6031 14367 10266;10267 10266 2 44329 0 GVVQELQQAISK VVRIASLEVENQSLRGVVQELQQAISKLEA SLRGVVQELQQAISKLEARLNVLEKSSPGH R G V S K L 1 0 0 0 0 3 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1298.7194 P29692 P29692 96 107 EEF1D Elongation factor 1-delta yes yes 2 0.00093658 147.26 By MS/MS 7.5 0.5 1 1 2 2199500 2199500 0 5818 726 6032 14368;14369 10268;10269 10269 2 74773 0 GVYPDLLATSGDYLR HPYPTTKLMWIPDTKGVYPDLLATSGDYLR GVYPDLLATSGDYLRVWRVGETETRLECLL K G V L R V 1 1 0 2 0 0 0 2 0 0 3 0 0 0 1 1 1 0 2 1 0 0 15 0 1638.8253 P61962 P61962 82 96 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 2 1.5143E-05 142.97 By MS/MS 7.5 0.5 1 1 2 507090 507090 0 5819 1108 6033 14370;14371 10270;10271 10271 2 24375 0 GVYSEETLR TQALTAAIPPESLTRGVYSEETLRARFYAV PESLTRGVYSEETLRARFYAVQKLARRVAM R G V L R A 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 1 0 1 1 0 0 9 0 1052.5138 Q16891 Q16891 624 632 IMMT MICOS complex subunit MIC60 yes yes 2 0.0074341 110.41 By MS/MS By matching 5 0 2 1 1 1124900 1106800 18060 5820 1554 6034 14372;14373 10272 10272 1 45494 53440 GWDDLFNK ELDLVNYQNKCRLIRGWDDLFNKVKEHINS NKCRLIRGWDDLFNKVKEHINSVSAMKLSP R G W N K V 0 0 1 2 0 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 8 0 993.4556 Q14204 Q14204 1489 1496 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0068936 130.04 By MS/MS 1 0 1 1 98004 98004 0 5821 1421 6035 14374 10273 10273 1 4788.3 0 GWDENVYYTVPLVR LQSREETRNAAWRKRGWDENVYYTVPLVRH RGWDENVYYTVPLVRHMESRIMIPLKISPL R G W V R H 0 1 1 1 0 0 1 1 0 0 1 0 0 0 1 0 1 1 2 3 0 0 14 0 1709.8413 Q9BPW8 Q9BPW8 255 268 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 1.2731E-05 166.14 By MS/MS 8 0 1 1 2602300 2602300 0 5822 2301 6036 14375 10274 10274 1 171670 0 GWENHVEGQK QLTAYMKRVEDVLGKGWENHVEGQKLKQDG DVLGKGWENHVEGQKLKQDGDSFRMKLNTQ K G W Q K L 0 0 1 0 0 1 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 10 0 1182.5418 Q14204 Q14204 672 681 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.024787 89.029 By MS/MS 1.5 0.5 1 1 2 310000 310000 0 5823 1421 6037 14376;14377 10275 10275 1 15219 0 GWGDSVGTPSER VLSSLGYHVVTFDYRGWGDSVGTPSERGMT DYRGWGDSVGTPSERGMTYDALHVFDWIKA R G W E R G 0 1 0 1 0 0 1 3 0 0 0 0 0 0 1 2 1 1 0 1 0 0 12 0 1246.5578 Q8N2K0 Q8N2K0 207 218 ABHD12 Monoacylglycerol lipase ABHD12 yes yes 2 0.0026731 117.7 By MS/MS 7.5 0.5 1 1 2 1646100 1646100 0 5824 1906 6038 14378;14379 10276 10276 1 35996 0 GWGLLGPR DAERQAAAAACQLFKGWGLLGPRNELFDAA AACQLFKGWGLLGPRNELFDAAKYRVLADR K G W P R N 0 1 0 0 0 0 0 3 0 0 2 0 0 0 1 0 0 1 0 0 0 0 8 0 854.47627 Q7L2E3 Q7L2E3 123 130 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.011264 118.06 By MS/MS 3.5 0.5 1 1 2 825780 825780 0 5825 1763 6039 14380;14381 10277 10277 1 21762 0 GWGSALAAAR TGPEPMPSYAQLVQRGWGSALAAARGCTDC QLVQRGWGSALAAARGCTDCGWGLARRGLA R G W A R G 4 1 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 10 0 958.49846 P27544 P27544 26 35 CERS1 Ceramide synthase 1 yes yes 2 0.00016685 158.07 By MS/MS 2 0.816 1 1 1 3 643710 643710 0 5826 706 6040 14382;14383;14384 10278 10278 1 29017 0 GWNILTNSEK KAPKVVAACAMPVMKGWNILTNSEKSKKAR MPVMKGWNILTNSEKSKKAREGVMEFLLAN K G W E K S 0 0 2 0 0 0 1 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 10 0 1160.5826 P28331 P28331 99 108 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.026544 87.806 By MS/MS 4.5 0.5 1 1 2 778440 778440 0 5827 718 6041 14385;14386 10279 10279 1 31443 0 GYAFNHSADFETVR GRDITRYLIKLLLLRGYAFNHSADFETVRM RGYAFNHSADFETVRMIKEKLCYVGYNIEQ R G Y V R M 2 1 1 1 0 0 1 1 1 0 0 0 0 2 0 1 1 0 1 1 0 0 14 0 1612.727 P61160 P61160 201 214 ACTR2 Actin-related protein 2 yes yes 2;3 0.00010969 152.96 By MS/MS 7 0 2 2 4599700 4599700 0 5828 1089 6042 14387;14388 10280;10281 10281 2 82198 0 GYAIELPEDIEENR SNGKKLDIGLELVHKGYAIELPEDIEENRA KGYAIELPEDIEENRAVPDMLKDMATETDA K G Y N R A 1 1 1 1 0 0 4 1 0 2 1 0 0 0 1 0 0 0 1 0 0 0 14 0 1646.7788 Q9Y2W6 Q9Y2W6 490 503 TDRKH Tudor and KH domain-containing protein yes yes 2 0.0018909 117.25 By MS/MS 5 0 1 1 666640 666640 0 5829 2904 6043 14389 10282 10282 1 27402 0 GYAPESVLER HQIRKMVGLVVAIVKGYAPESVLERSWGTE VAIVKGYAPESVLERSWGTEKVDVPKAPGL K G Y E R S 1 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1119.556 Q9Y606 Q9Y606 307 316 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 0.0058042 98.044 By MS/MS 7.5 0.5 1 1 2 4285500 4285500 0 5830 2992 6044 14390;14391 10283 10283 1 82017 0 GYAVLGGER LNDIAAVPATAMPFRGYAVLGGERGGPEVQ TAMPFRGYAVLGGERGGPEVQQVPAGERPL R G Y E R G 1 1 0 0 0 0 1 3 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 0 920.47158 P49327 P49327 469 477 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.001962 130.22 By MS/MS 2.5 1.12 1 1 1 1 4 17222000 17222000 0 5831 915 6045 14392;14393;14394;14395 10284;10285;10286 10284 3 691660 0 GYAVNVFDIQQGFDNPQVR SGFLGQHMVEQLLARGYAVNVFDIQQGFDN NVFDIQQGFDNPQVRFFLGDLCSRQDLYPA R G Y V R F 1 1 2 2 0 3 0 2 0 1 0 0 0 2 1 0 0 0 1 3 0 0 19 0 2166.0494 Q15738 Q15738 61 79 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 2.3128E-11 166.79 By MS/MS 7 0 1 1 233420 233420 0 5832 1515 6046 14396 10287 10287 1 4171.3 0 GYDFESETDTETIAK IITNYKDLKKFLESKGYDFESETDTETIAK GYDFESETDTETIAKLVKYMYDNRESQDTS K G Y A K L 1 0 0 2 0 0 3 1 0 1 0 1 0 1 0 1 3 0 1 0 0 0 15 0 1704.7366 Q06210 Q06210 140 154 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 8.1944E-63 290.61 By MS/MS 5.5 0.5 1 1 2 5762100 5762100 0 5833 1274 6047 14397;14398 10288 10288 1 198080 0 GYDSDNPR GQQGLSVAFDLATHRGYDSDNPRVRGDVGM FDLATHRGYDSDNPRVRGDVGMAGVAIDTV R G Y P R V 0 1 1 2 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 8 0 922.37807 P22033 P22033 145 152 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.0056149 134.81 By MS/MS 2 0 1 1 234690 234690 0 5834 653 6048 14399 10289 10289 1 11665 0 GYDVIAQAQSGTGK KPSAIQQRAILPCIKGYDVIAQAQSGTGKT KGYDVIAQAQSGTGKTATFAISILQQIELD K G Y G K T 2 0 0 1 0 2 0 3 0 1 0 1 0 0 0 1 1 0 1 1 0 0 14 0 1393.6838 P60842;Q14240 P60842 69 82 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 1.6656E-46 282.21 By MS/MS By MS/MS 4.68 2.75 3 3 2 1 1 4 2 1 1 1 18 1 2288300000 2288100000 196370 5835 1074 6049 14400;14401;14402;14403;14404;14405;14406;14407;14408;14409;14410;14411;14412;14413;14414;14415;14416;14417;14418 10290;10291;10292;10293;10294;10295;10296;10297;10298;10299;10300;10301;10302;10303;10304;10305;10306;10307;10308 10306 19 31199000 602260 GYEIDEDIVSR YKHLKMCIRVEMQSRGYEIDEDIVSRVAEE MQSRGYEIDEDIVSRVAEEMTFFPKEERVF R G Y S R V 0 1 0 2 0 0 2 1 0 2 0 0 0 0 0 1 0 0 1 1 0 0 11 0 1294.6041 O14656 O14656 289 299 TOR1A Torsin-1A yes yes 2 0.00038118 164.66 By MS/MS 8 0 1 1 1493300 1493300 0 5836 119 6050 14419 10309 10309 1 98515 0 GYELLFQPEVVR ANDTVDFPKRTSPARGYELLFQPEVVRIYI PARGYELLFQPEVVRIYISLLKESKTPAIL R G Y V R I 0 1 0 0 0 1 2 1 0 0 2 0 0 1 1 0 0 0 1 2 0 0 12 0 1448.7664 O60716 O60716 655 666 CTNND1 Catenin delta-1 yes yes 2 4.5044E-05 167.09 By MS/MS 6 1.41 1 1 1 1 1 5 9121700 9121700 0 5837 260 6051 14420;14421;14422;14423;14424 10310;10311;10312;10313 10310 4 248900 0 GYFEYIEENKYSR DKKRGVKRPREDHGRGYFEYIEENKYSRAK GRGYFEYIEENKYSRAKSPQPPVEEEDEHF R G Y S R A 0 1 1 0 0 0 3 1 0 1 0 1 0 1 0 1 0 0 3 0 0 0 13 1 1696.7733 Q00839 Q00839 256 268 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.0023537 142.08 By MS/MS 4 0.816 1 1 1 3 793570 793570 0 5838 1238 6052 14425;14426;14427 10314 10314 1 22557 0 GYFFPTSAR ANILGYAVSTFAMVKGYFFPTSARDCKFTG TFAMVKGYFFPTSARDCKFTGNFFYNYMMG K G Y A R D 1 1 0 0 0 0 0 1 0 0 0 0 0 2 1 1 1 0 1 0 0 0 9 0 1044.5029 Q9UBM7 Q9UBM7 199 207 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.026319 93.162 By MS/MS 3.25 2.28 1 1 1 1 4 2914100 2914100 0 5839 2753 6053 14428;14429;14430;14431 10315;10316 10316 2 72953 0 GYGLFAGPCK RNVDSNNKELSIAIRGYGLFAGPCKVINAK SIAIRGYGLFAGPCKVINAKDVDFMYVELI R G Y C K V 1 0 0 0 1 0 0 3 0 0 1 1 0 1 1 0 0 0 1 0 0 0 10 0 1068.5063 P78527 P78527 365 374 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00082949 130.77 By MS/MS 2.5 1.12 1 1 1 1 4 5432200 5432200 0 5840 1197 6054 14432;14433;14434;14435 10317;10318;10319;10320 10318 4 252260 0 GYGYGQGAGTLNMDR EIYCKSCYGKKYGPKGYGYGQGAGTLNMDR GYGYGQGAGTLNMDRGERLGIKPESVQPHR K G Y D R G 1 1 1 1 0 1 0 5 0 0 1 0 1 0 0 0 1 0 2 0 0 0 15 0 1558.6834 Q16527 Q16527 70 84 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 9.9613E-10 176.78 By MS/MS 9 0 1 1 454240 454240 0 5841 1536 6055 14436 10321 10321 1170 1 260690 0 GYHYATCLEGALK ATELYHQKSVLIMGRGYHYATCLEGALKIK GRGYHYATCLEGALKIKEITYMHSEGILAG R G Y L K I 2 0 0 0 1 0 1 2 1 0 2 1 0 0 0 0 1 0 2 0 0 0 13 0 1481.6973 Q06210 Q06210 564 576 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 3 0.0035139 100.04 By MS/MS 5 0 1 1 990800 990800 0 5842 1274 6056 14437 10322 10322 1 40726 0 GYIGVVNR DARDVLENKLLPLRRGYIGVVNRSQKDIEG KLLPLRRGYIGVVNRSQKDIEGKKDIRAAL R G Y N R S 0 1 1 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 1 2 0 0 8 0 876.48175 P50570;Q05193 P50570 230 237 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 2 0.01511 113.08 By MS/MS 4 0 1 1 506340 506340 0 5843 949 6057 14438 10323 10323 1 13823 0 GYISHQHQK VQCILANLIYMGHVKGYISHQHQKLVVSKQ YMGHVKGYISHQHQKLVVSKQNPFPPLSTV K G Y Q K L 0 0 0 0 0 2 0 1 2 1 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1096.5414 Q5JVF3 Q5JVF3 375 383 PCID2 PCI domain-containing protein 2 yes yes 2 0.020713 107.66 By MS/MS 7 0 1 1 237720 237720 0 5844 1612 6058 14439 10324 10324 1 4248.2 0 GYISPYFINTSK LNDELEIIEGMKFDRGYISPYFINTSKGQK FDRGYISPYFINTSKGQKCEFQDAYVLLSE R G Y S K G 0 0 1 0 0 0 0 1 0 2 0 1 0 1 1 2 1 0 2 0 0 0 12 0 1388.6976 P10809 P10809 222 233 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 3.9579E-07 183.85 By MS/MS By MS/MS 5.86 1.46 1 1 3 1 1 6 1 298810000 298550000 254690 5845 544 6059 14440;14441;14442;14443;14444;14445;14446 10325;10326;10327;10328;10329;10330 10328 6 2512600 781110 GYKHTLNQIDSVK AALAAVDYINKHLPRGYKHTLNQIDSVKVW PRGYKHTLNQIDSVKVWPRRPTGEVYDIEI R G Y V K V 0 0 1 1 0 1 0 1 1 1 1 2 0 0 0 1 1 0 1 1 0 0 13 1 1501.7889 CON__P12763 CON__P12763 55 67 yes yes 2 0.0053584 134.75 By MS/MS 6.5 0.5 1 1 2 2928500 2928500 0 + 5846 48 6060 14447;14448 10331 10331 1 23460 0 GYLADPAKFPEAR PPEELVPYYTDAKNRGYLADPAKFPEARLE NRGYLADPAKFPEARLELARKYGYILPDIT R G Y A R L 3 1 0 1 0 0 1 1 0 0 1 1 0 1 2 0 0 0 1 0 0 0 13 1 1433.7303 Q9P015 Q9P015 221 233 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 3 0.0031349 99.5 By MS/MS 8.5 0.5 1 1 2 1624500 1624500 0 5847 2721 6061 14449;14450 10332 10332 1 142710 0 GYLDKLEPSK MAIEEQVAVIYAGVRGYLDKLEPSKITKFE YAGVRGYLDKLEPSKITKFENAFLSHVVSQ R G Y S K I 0 0 0 1 0 0 1 1 0 0 2 2 0 0 1 1 0 0 1 0 0 0 10 1 1148.6077 P25705 P25705 494 503 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00080105 164.68 By MS/MS 7 0.816 1 1 1 3 35039000 35039000 0 5848 687 6062 14451;14452;14453 10333 10333 1 309400 0 GYLETPQPEK HGQHLVQQLVLRTVRGYLETPQPEKALALS LRTVRGYLETPQPEKALALSFHGWSGTGKN R G Y E K A 0 0 0 0 0 1 2 1 0 0 1 1 0 0 2 0 1 0 1 0 0 0 10 0 1160.5714 Q9H497 Q9H497 150 159 TOR3A Torsin-3A yes yes 2 0.00058809 141.52 By MS/MS 7 0 1 1 725250 725250 0 5849 2496 6063 14454 10334 10334 1 12960 0 GYLGPEQLPDCLK VAADLSHIETKAAVKGYLGPEQLPDCLKGC VKGYLGPEQLPDCLKGCDVVVIPAGVPRKP K G Y L K G 0 0 0 1 1 1 1 2 0 0 3 1 0 0 2 0 0 0 1 0 0 0 13 0 1488.7283 P40926 P40926 79 91 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.00033546 141.08 By MS/MS 8 0 1 1 1678900 1678900 0 5850 832 6064 14455 10335 10335 1 110760 0 GYLISGSSYAR KLTLIDPETLLPRLKGYLISGSSYARSSVV PRLKGYLISGSSYARSSVVTAVKFTISDHP K G Y A R S 1 1 0 0 0 0 0 2 0 1 1 0 0 0 0 3 0 0 2 0 0 0 11 0 1172.5826 Q86VP6 Q86VP6 972 982 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00042677 145.72 By MS/MS 3.5 0.5 1 1 2 1847300 1847300 0 5851 1829 6065 14456;14457 10336 10336 1 49649 0 GYNDDYYEESYFTTR YDLPKKEDALLYQSKGYNDDYYEESYFTTR GYNDDYYEESYFTTRTYGEPESAGPSRAVR K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 P50402 P50402 89 103 EMD Emerin yes yes 2 7.4501E-50 279.56 By MS/MS 8.4 1.02 1 2 1 1 5 19509000 19509000 0 5852 945 6066 14458;14459;14460;14461;14462 10337;10338;10339;10340 10337 4 1797400 0 GYPTLLLFR DCTAERNICSKYSVRGYPTLLLFRGGKKVS SKYSVRGYPTLLLFRGGKKVSEHSGGRDLD R G Y F R G 0 1 0 0 0 0 0 1 0 0 3 0 0 1 1 0 1 0 1 0 0 0 9 0 1078.6175 Q8NBS9 Q8NBS9 395 403 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.00095559 143.12 By MS/MS 6 0 1 1 1001300 1001300 0 5853 1945 6067 14463 10341 10341 1 7807.8 0 GYPTLLWFR DCTQHYELCSGNQVRGYPTLLWFRDGKKVD SGNQVRGYPTLLWFRDGKKVDQYKGKRDLE R G Y F R D 0 1 0 0 0 0 0 1 0 0 2 0 0 1 1 0 1 1 1 0 0 0 9 0 1151.6128 Q8NBS9 Q8NBS9 261 269 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.002709 122.18 By MS/MS 6 0 1 1 318590 318590 0 5854 1945 6068 14464 10342 10342 1 2484.3 0 GYQTSPDLR EDPEMLIDLMYRIAKGYQTSPDLRLTWLQN MYRIAKGYQTSPDLRLTWLQNMAGKHSERS K G Y L R L 0 1 0 1 0 1 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 1035.4985 Q96N67 Q96N67 1679 1687 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.021239 96.034 By MS/MS 2 0 1 1 1207700 1207700 0 5855 2230 6069 14465 10343 10343 1 60028 0 GYSFSLTTFSPSGK ______________________________ RGYSFSLTTFSPSGKLVQIEYALAAVAGGA R G Y G K L 0 0 0 0 0 0 0 2 0 0 1 1 0 2 1 4 2 0 1 0 0 0 14 0 1477.7089 P25787 P25787 5 18 PSMA2 Proteasome subunit alpha type-2 yes yes 2 0.0037338 109.39 By MS/MS 9.5 0.5 1 1 2 281650 281650 0 5856 689 6070 14466;14467 10344 10344 1 224150 0 GYSFTTTAER GRDLTDYLMKILTERGYSFTTTAEREIVRD ILTERGYSFTTTAEREIVRDIKEKLCYVAL R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P60709;P63261 P60709 197 206 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2 6.785E-17 232.46 By MS/MS By MS/MS 7.29 1.03 2 2 2 1 4 3 69764000 68420000 1343300 5857 1072;1179 6071 14468;14469;14470;14471;14472;14473;14474 10345;10346;10347;10348 10346 4 1422400 5940200 GYSLVSGGTDNHLVLVDLRPK VLKNARAMADALLERGYSLVSGGTDNHLVL GGTDNHLVLVDLRPKGLDGARAERVLELVS R G Y P K G 0 1 1 2 0 0 0 3 1 0 4 1 0 0 1 2 1 0 1 3 0 0 21 1 2239.1961 P34897 P34897 369 389 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 3 0.00081629 82.877 By MS/MS 6 0 1 1 2717000 2717000 0 5858 777 6072 14475 10349 10349 1 21187 0 GYSQQDAQEFLR TTLFQGIKTVNPTFRGYSQQDAQEFLRCLM TFRGYSQQDAQEFLRCLMDLLHEELKEQVM R G Y L R C 1 1 0 1 0 3 1 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 12 0 1440.6634 Q8TEY7 Q8TEY7 266 277 USP33 Ubiquitin carboxyl-terminal hydrolase 33 yes yes 2 4.8138E-07 181.31 By MS/MS 4 0 1 1 924090 924090 0 5859 2006 6073 14476 10350 10350 1 25227 0 GYTAEQVAAVK DAPSANGEAGGESTKGYTAEQVAAVKRVKQ ESTKGYTAEQVAAVKRVKQCKDYYEILGVS K G Y V K R 3 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 1 2 0 0 11 0 1135.5873 Q9NXW2 Q9NXW2 93 103 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0033172 125.68 By MS/MS 7 0 1 1 2369900 2369900 0 5860 2694 6074 14477 10351 10351 0 42351 0 GYTAEQVAAVKR DAPSANGEAGGESTKGYTAEQVAAVKRVKQ STKGYTAEQVAAVKRVKQCKDYYEILGVSR K G Y K R V 3 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 1 2 0 0 12 1 1291.6884 Q9NXW2 Q9NXW2 93 104 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 9.5585E-07 182.16 By MS/MS 7 0 1 1 1989400 1989400 0 5861 2694 6075 14478 10352 10352 1 35551 0 GYVFQMEMIVR RKEVLEKLIEKCVSKGYVFQMEMIVRARQL CVSKGYVFQMEMIVRARQLNYTIGEVPISF K G Y V R A 0 1 0 0 0 1 1 1 0 1 0 0 2 1 0 0 0 0 1 2 0 0 11 0 1371.6679 O60762 O60762 206 216 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 2.2737E-05 162.64 By MS/MS By MS/MS 8 0 2 1 1 1526900 1474900 52027 5862 263 6076 14479;14480 10353;10354 10354 146;147 2 97297 443850 GYYSPGIVSTR VKPAQASHTNYLLMRGYYSPGIVSTRNLNP LLMRGYYSPGIVSTRNLNPNDSIVVNSCQM R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q12789 Q12789 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0015739 125.97 By MS/MS 1.5 0.5 1 1 2 478360 478360 0 5863 1306 6077 14481;14482 10355 10355 1 23704 0 HAACPVLVGNK WYNLFASGEGDYSTRHAACPVLVGNKWVSN YSTRHAACPVLVGNKWVSNKWLHERGQEFR R H A N K W 2 0 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1164.6074 P13674 P13674 500 510 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 2 0.0024127 113.41 By MS/MS 6 0 1 1 0 0 0 5864 578 6078 14483 10356 10356 1 0 0 HAALQDIGK APVEHVVADAGAFLRHAALQDIGKNIYTIR AGAFLRHAALQDIGKNIYTIREVVTEIRDK R H A G K N 2 0 0 1 0 1 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 951.51378 Q9ULX3 Q9ULX3 17 25 NOB1 RNA-binding protein NOB1 yes yes 2 0.010578 103.55 By MS/MS 7 0 1 1 2127100 2127100 0 5865 2829 6079 14484 10357 10357 1 38012 0 HADDDRPPRR RPPRRIADEDRGNWRHADDDRPPRRGLDED RGNWRHADDDRPPRRGLDEDRGSWRTADED R H A R R G 1 3 0 3 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 10 2 1233.5963 Q14152 Q14152 1011 1020 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0020082 155.07 By MS/MS By matching 3.25 0.433 3 1 3 1 3026100 3015000 11111 5866 1409 6080 14485;14486;14487;14488 10358;10359 10359 2 78752 15924 HADHSSLTLGSGSSTTR PSPGNIPTTHPLMVRHADHSSLTLGSGSST DHSSLTLGSGSSTTRLTQGIGRSQRTLRQL R H A T R L 1 1 0 1 0 0 0 2 2 0 2 0 0 0 0 5 3 0 0 0 0 0 17 0 1712.8078 Q7Z6Z7 Q7Z6Z7 2522 2538 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.0010754 139 By MS/MS 1 0 1 1 396270 396270 0 5867 1803 6081 14489 10360 10360 1 19361 0 HADIVTTTTHK ISGLVAAKVIPSPFKHADIVTTTTHKTLRG SPFKHADIVTTTTHKTLRGARSGLIFYRKG K H A H K T 1 0 0 1 0 0 0 0 2 1 0 1 0 0 0 0 4 0 0 1 0 0 11 0 1222.6306 P34897 P34897 270 280 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 5.6809E-11 208.11 By MS/MS 6.5 0.5 1 1 2 8079100 8079100 0 5868 777 6082 14490;14491 10361 10361 1 64345 0 HAEKAPTNIVYK GNVEISQVTIVGIIRHAEKAPTNIVYKIDD IIRHAEKAPTNIVYKIDDMTAAPMDVRQWV R H A Y K I 2 0 1 0 0 0 1 0 1 1 0 2 0 0 1 0 1 0 1 1 0 0 12 1 1369.7354 P15927 P15927 82 93 RPA2 Replication protein A 32 kDa subunit yes yes 3 0.0014893 114.76 By MS/MS 8 0 1 1 2718900 2718900 0 5869 604 6083 14492 10362 10362 1 179370 0 HAELIASTFVDQCK SDEPLTKDDIPVFLRHAELIASTFVDQCKT RHAELIASTFVDQCKTVLKLASEEPPDDEE R H A C K T 2 0 0 1 1 1 1 0 1 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1617.7821 Q9UBB4 Q9UBB4 271 284 ATXN10 Ataxin-10 yes yes 2;3 2.2043E-08 191.26 By MS/MS 7 0 2 2 6066500 6066500 0 5870 2744 6084 14493;14494 10363;10364 10363 2 108410 0 HAIPIIK NIELTRYTRPTPVQKHAIPIIKEKRDLMAC TRPTPVQKHAIPIIKEKRDLMACAQTGSGK K H A I K E 1 0 0 0 0 0 0 0 1 3 0 1 0 0 1 0 0 0 0 0 0 0 7 0 790.50651 O00571;O15523 O00571 209 215 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.023809 119.23 By MS/MS 4 2 1 1 1 1 1 1 1 7 16408000 16408000 0 5871 105 6085 14495;14496;14497;14498;14499;14500;14501 10365;10366 10365 2 611800 0 HAIVICNR VIWSADMSHVALLAKHAIVICNRKLDALCN HVALLAKHAIVICNRKLDALCNIHENIRVK K H A N R K 1 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 8 0 981.51782 P53621 P53621 509 516 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.011541 117.7 By MS/MS 2.5 1.12 1 1 1 1 4 4983300 4983300 0 5872 1005 6086 14502;14503;14504;14505 10367;10368;10369;10370 10369 4 172040 0 HAIYDKLDDDGLIAPGVR EVFEKPTRETCQGMRHAIYDKLDDDGLIAP YDKLDDDGLIAPGVRVSGDDVIIGKTVTLP R H A V R V 2 1 0 4 0 0 0 2 1 2 2 1 0 0 1 0 0 0 1 1 0 0 18 1 1967.0112 P30876 P30876 842 859 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.0016801 92.096 By MS/MS 3.5 0.5 1 1 2 2095200 2095200 0 5873 748 6087 14506;14507 10371 10371 1 55048 0 HALDEVNLASCQLDPAGLR PVKCTVVAAVLGSGRHALDEVNLASCQLDP EVNLASCQLDPAGLRTLLPVFLRARKLGLQ R H A L R T 3 1 1 2 1 1 1 1 1 0 4 0 0 0 1 1 0 0 0 1 0 0 19 0 2078.0215 Q86UT6 Q86UT6 725 743 NLRX1 NLR family member X1 yes yes 3 0.00014492 118.96 By MS/MS 4 0 1 1 1325300 1325300 0 5874 1825 6088 14508 10372 10372 1 36179 0 HALIIYDDLSK YSGCSMGEYFRDNGKHALIIYDDLSKQAVA DNGKHALIIYDDLSKQAVAYRQMSLLLRRP K H A S K Q 1 0 0 2 0 0 0 0 1 2 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1286.6871 P25705 P25705 306 316 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 9.6725E-07 178.55 By MS/MS By MS/MS 6.6 0.8 3 1 1 4 1 166630000 166630000 0 5875 687 6089 14509;14510;14511;14512;14513 10373;10374;10375;10376;10377;10378 10374 5 1478300 0 HALLDVTPNAVDR IIRLHTIKQIIDQDKHALLDVTPNAVDRLN DKHALLDVTPNAVDRLNYAQWYPIVVFLNP K H A D R L 2 1 1 2 0 0 0 0 1 0 2 0 0 0 1 0 1 0 0 2 0 0 13 0 1419.747 Q07157 Q07157 703 715 TJP1 Tight junction protein ZO-1 yes yes 2 0.026594 80.239 By MS/MS 1.5 0.5 1 1 2 643090 643090 0 5876 1280 6090 14514;14515 10379 10379 1 31935 0 HASHISK ILLGEVALGNMYELKHASHISKLPKGKHSV LGNMYELKHASHISKLPKGKHSVKGLGKTT K H A S K L 1 0 0 0 0 0 0 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 7 0 778.40859 P09874 P09874 934 940 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0094613 155.51 By MS/MS 4 0.816 1 1 1 3 1686300 1686300 0 5877 521 6091 14516;14517;14518 10380 10380 1 46736 0 HASLQNSQR GERMLSTFKELFSEKHASLQNSQRTVAEVQ ELFSEKHASLQNSQRTVAEVQETLAEMIRQ K H A Q R T 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 1039.5159 Q8TEQ6 Q8TEQ6 1364 1372 GEMIN5 Gem-associated protein 5 yes yes 2 0.00021894 162.88 By MS/MS 3.5 0.5 1 1 2 790020 790020 0 5878 2003 6092 14519;14520 10381 10381 1 20743 0 HASPEDIKK ______________________________ VLGVQRHASPEDIKKAYRKLALKWHPDKNP R H A K K A 1 0 0 1 0 0 1 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 9 1 1023.5349 O75190 O75190 13 21 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 3 0.00014394 138.06 By MS/MS 8 0 1 1 1500400 1500400 0 5879 291 6093 14521 10382 10382 1 98983 0 HASPILPITEFSDIPR SNESLVVNRVTGNFKHASPILPITEFSDIP ASPILPITEFSDIPRRAPKKPLTRAEVGEK K H A P R R 1 1 0 1 0 0 1 0 1 3 1 0 0 1 3 2 1 0 0 0 0 0 16 0 1791.9519 P42167 P42167 304 319 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2;3 0.00054569 120.55 By MS/MS 6 0 2 2 7191400 7191400 0 5880 846 6094 14522;14523 10383;10384 10384 2 56079 0 HAVDGAVK VQCLLLLEVLGGSHKHAVDGAVKKLTKLWK VLGGSHKHAVDGAVKKLTKLWKENPGLVEQ K H A V K K 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 2 0 0 8 0 795.4239 Q92616 Q92616 160 167 GCN1L1 Translational activator GCN1 yes yes 2 0.055211 89.296 By MS/MS 1.5 0.5 1 1 2 281120 281120 0 5881 2068 6095 14524;14525 10385 10385 1 13923 0 HAVDGAVKK VQCLLLLEVLGGSHKHAVDGAVKKLTKLWK LGGSHKHAVDGAVKKLTKLWKENPGLVEQY K H A K K L 2 0 0 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 2 0 0 9 1 923.51886 Q92616 Q92616 160 168 GCN1L1 Translational activator GCN1 yes yes 2 0.0046027 138.54 By MS/MS 2 0 1 1 67353 67353 0 5882 2068 6096 14526 10386 10386 1 3347.8 0 HAVGTMYR RFAAQGEPKVYNTLRHAVGTMYRSEGPQVF KVYNTLRHAVGTMYRSEGPQVFYKGLAPTL R H A Y R S 1 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 1 0 0 8 0 933.44907 Q9HC21 Q9HC21 160 167 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.038044 89.142 By MS/MS 8 0 1 1 284150 284150 0 5883 2556 6097 14527 10387 10387 1540 1 18745 0 HAVSEGTK IQTAVRLLLPGELAKHAVSEGTKAVTKYTS LPGELAKHAVSEGTKAVTKYTSSK______ K H A T K A 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 8 0 827.41373 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899;Q96A08;A0A2R8Y619 Q99880 110 117 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-A yes no 2 0.0072772 128.61 By MS/MS By matching 10 0 2 1 1 334760 325640 9120.4 5884 267 6098 14528;14529 10388 10388 1 346120 233930 HAVSEGTKAVTK IQTAVRLLLPGELAKHAVSEGTKAVTKYTS LAKHAVSEGTKAVTKYTSSK__________ K H A T K Y 2 0 0 0 0 0 1 1 1 0 0 2 0 0 0 1 2 0 0 2 0 0 12 1 1226.6619 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899;Q96A08;A0A2R8Y619 Q99880 110 121 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-A yes no 3 0.031321 50.484 By MS/MS 10 0 1 1 111540 111540 0 5885 267 6099 14530 10389 10389 1 118560 0 HAVVVGR CLELIKETGVPIAGRHAVVVGRSKIVGAPM TGVPIAGRHAVVVGRSKIVGAPMHDLLLWN R H A G R S 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 3 0 0 7 0 736.43441 P11586 P11586 167 173 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.044485 104.94 By MS/MS 4.5 1.12 1 1 1 1 4 10725000 10725000 0 5886 556 6100 14531;14532;14533;14534 10390 10390 1 279580 0 HCDLQVR VDAFQLERAIVDAARHCDLQVRIDHTSRTL RAIVDAARHCDLQVRIDHTSRTLSFGSDLN R H C V R I 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 926.43923 Q14152 Q14152 477 483 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0038256 183.89 By MS/MS 3.43 1.59 1 1 2 1 1 1 7 35033000 35033000 0 5887 1409 6101 14535;14536;14537;14538;14539;14540;14541 10391;10392;10393 10392 3 982200 0 HCDNLLR GLCLLTWGGHWLYGKHCDNLLRRAACQEAQ GGHWLYGKHCDNLLRRAACQEAQVFGNQLI K H C L R R 0 1 1 1 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 926.43923 Q53H12 Q53H12 33 39 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.039937 108.09 By MS/MS 7 0 1 1 7916200 7916200 0 5888 1587 6102 14542 10394 10394 1 141460 0 HCNGVDWR VSFINIKTLNEWDSRHCNGVDWRQKLDSQR LNEWDSRHCNGVDWRQKLDSQRGAVIATEL R H C W R Q 0 1 1 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 8 0 1042.4403 O15371 O15371 403 410 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.01563 112.41 By MS/MS 5.5 0.5 1 1 2 4925600 4925600 0 5889 172 6103 14543;14544 10395 10395 1 54157 0 HCSQVDSVR DKSAVGHEYQSKLSKHCSQVDSVRGFGGKF QSKLSKHCSQVDSVRGFGGKFGVQMDRVDQ K H C V R G 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 2 0 0 0 2 0 0 9 0 1086.4876 Q14247 Q14247 111 119 CTTN Src substrate cortactin yes yes 2 0.00025051 160.82 By MS/MS By matching 5.33 0.471 2 1 2 1 1154000 1140800 13169 5890 1424 6104 14545;14546;14547 10396 10396 1 41192 38967 HCSSSIGTIR EETEQCADLCLRLLRHCSSSIGTIRSHASA LRLLRHCSSSIGTIRSHASASLYLLMRQNF R H C I R S 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 3 1 0 0 0 0 0 10 0 1116.5346 Q96N67 Q96N67 1560 1569 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0027233 114.89 By MS/MS 3 0.816 1 1 1 3 2250600 2250600 0 5891 2230 6105 14548;14549;14550 10397;10398 10397 2 98890 0 HCTASTLPK TIKQQTSLFIARSFRHCTASTLPKSLLKPF IARSFRHCTASTLPKSLLKPFCAALLKHIN R H C P K S 1 0 0 0 1 0 0 0 1 0 1 1 0 0 1 1 2 0 0 0 0 0 9 0 1013.4964 Q14008 Q14008 426 434 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0022182 127.46 By MS/MS 2 0 1 1 1525800 1525800 0 5892 1405 6106 14551 10399 10399 1 75839 0 HDAATCFVDAGNAFK AFCQAAQLHLQLQSKHDAATCFVDAGNAFK HDAATCFVDAGNAFKKADPQEAINCLMRAI K H D F K K 4 0 1 2 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 1 0 0 15 0 1622.7147 P54920 P54920 79 93 NAPA Alpha-soluble NSF attachment protein yes yes 2 1.6862E-15 213.63 By MS/MS 8 0 1 1 1005300 1005300 0 5893 1020 6107 14552 10400 10400 1 66322 0 HDADGQATLLNLLLR VRSFLHARLRTATLRHDADGQATLLNLLLR HDADGQATLLNLLLRNYLHYSLYDQAEKLV R H D L R N 2 1 1 2 0 1 0 1 1 0 5 0 0 0 0 0 1 0 0 0 0 0 15 0 1648.8897 O43242 O43242 242 256 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2;3 8.07E-92 327.62 By MS/MS 6 0 4 4 9919300 9919300 0 5894 187 6108 14553;14554;14555;14556 10401;10402;10403;10404 10402 4 77351 0 HDAETNITTEK SRSHAVFNIIFTQKRHDAETNITTEKVSKI TQKRHDAETNITTEKVSKISLVDLAGSERA R H D E K V 1 0 1 1 0 0 2 0 1 1 0 1 0 0 0 0 3 0 0 0 0 0 11 0 1257.5837 Q12756 Q12756 230 240 KIF1A Kinesin-like protein KIF1A yes yes 2 0.00049385 143 By MS/MS 1.5 0.5 1 1 2 510810 510810 0 5895 1302 6109 14557;14558 10405 10405 1 25295 0 HDGSEPCVDVLFGDGHR VRSTNLNCSVIADVRHDGSEPCVDVLFGDG GSEPCVDVLFGDGHRLIMRGAHLTALEMLT R H D H R L 0 1 0 3 1 0 1 3 2 0 1 0 0 1 1 1 0 0 0 2 0 0 17 0 1895.8221 Q96EL3 Q96EL3 57 73 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 3 0.0076459 74.783 By MS/MS 10 0 1 1 334310 334310 0 5896 2163 6110 14559 10406;10407 10407 2 355340 0 HDKVEDALNLK MVTGGYAALINLCCRHDKVEDALNLKEEFD LCCRHDKVEDALNLKEEFDRLDSSAVLDTG R H D L K E 1 0 1 2 0 0 1 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 11 1 1280.6725 P42704 P42704 724 734 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 7.1816E-06 178.46 By MS/MS 3.33 0.471 2 1 3 6472300 6472300 0 5897 854 6111 14560;14561;14562 10408;10409 10409 2 169410 0 HDKVEDALNLKEEFDR MVTGGYAALINLCCRHDKVEDALNLKEEFD DKVEDALNLKEEFDRLDSSAVLDTGKYVGL R H D D R L 1 1 1 3 0 0 3 0 1 0 2 2 0 1 0 0 0 0 0 1 0 0 16 2 1956.9541 P42704 P42704 724 739 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.011219 82.007 By MS/MS 3.5 0.5 1 1 2 2984800 2984800 0 5898 854 6112 14563;14564 10410 10410 1 78322 0 HDNLLHGTK NFSQEDQQDTQIYEKHDNLLHGTKKKKEKM TQIYEKHDNLLHGTKKKKEKMVSAAFMKKY K H D T K K 0 0 1 1 0 0 0 1 2 0 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1033.5305 P25205 P25205 548 556 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.016462 80.706 By MS/MS 4 0 1 1 935870 935870 0 5899 683 6113 14565 10411 10411 1 25548 0 HDSPEDVK AADGYQRCMMAQYNRHDSPEDVKRRAMADP MMAQYNRHDSPEDVKRRAMADPEVQQIMSD R H D V K R 0 0 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 8 0 925.41412 P31948 P31948 479 486 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.008849 122.74 By MS/MS 6 0 1 1 1667900 1667900 0 5900 762 6114 14566 10412 10412 1 13006 0 HDSPEDVKR AADGYQRCMMAQYNRHDSPEDVKRRAMADP MAQYNRHDSPEDVKRRAMADPEVQQIMSDP R H D K R R 0 1 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 9 1 1081.5152 P31948 P31948 479 487 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.050197 65.157 By MS/MS 5.5 0.5 1 1 2 835380 835380 0 5901 762 6115 14567;14568 10413 10413 0 10158 0 HDSSTAVAGSPR AEARRMAFLAKKGYRHDSSTAVAGSPRGHG GYRHDSSTAVAGSPRGHGQSRETTQERRKK R H D P R G 2 1 0 1 0 0 0 1 1 0 0 0 0 0 1 3 1 0 0 1 0 0 12 0 1183.5582 Q9H1I8 Q9H1I8 704 715 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.006074 126.03 By MS/MS 4 0 1 1 169490 169490 0 5902 2466 6116 14569 10414 10414 1 4626.8 0 HDVNLGR NKKCWPRDARMRLMKHDVNLGRAVFWDIKN DARMRLMKHDVNLGRAVFWDIKNRLPRSVT K H D G R A 0 1 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 809.4144 Q6P2Q9 Q6P2Q9 1145 1151 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0094613 155.51 By MS/MS 2.5 1.12 1 1 1 1 4 1935800 1935800 0 5903 1706 6117 14570;14571;14572;14573 10415 10415 1 90025 0 HDVTCTVSGGGR EQLMFPFHFVDRLGKHDVTCTVSGGGRSAQ LGKHDVTCTVSGGGRSAQAGAIRLAMAKAL K H D G R S 0 1 0 1 1 0 0 3 1 0 0 0 0 0 0 1 2 0 0 2 0 0 12 0 1244.5568 P82933 P82933 326 337 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 2.2847E-25 251.64 By MS/MS By matching 7 0 2 1 1 6985100 6978200 6955.7 5904 1211 6118 14574;14575 10416 10416 1 124700 28555 HEDHQVSDGALR SSLEICVESLSSLLKHEDHQVSDGALRCFA LLKHEDHQVSDGALRCFASLADRFTRRGVD K H E L R C 1 1 0 2 0 1 1 1 2 0 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1362.6276 Q9ULT8 Q9ULT8 197 208 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 3 0.0018647 95.417 By MS/MS 1.5 0.5 1 1 2 281010 281010 0 5905 2826 6119 14576;14577 10417 10417 1 13924 0 HEDQLEVTR SARIAKMSLSPSSPRHEDQLEVTREPARRL SPSSPRHEDQLEVTREPARRLFLFGEEPSK R H E T R E 0 1 0 1 0 1 2 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1125.5415 Q86XL3 Q86XL3 810 818 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0021422 128.28 By MS/MS 4 0 1 1 983830 983830 0 5906 1841 6120 14578 10418 10418 1 26857 0 HEEEEAKAER IRVLKQKEVEQLIKKHEEEEAKAEREKKEK QLIKKHEEEEAKAEREKKEKEQKEKDK___ K H E E R E 2 1 0 0 0 0 5 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 10 1 1226.5527 P25789 P25789 240 249 PSMA4 Proteasome subunit alpha type-4 yes yes 3 0.037263 81.017 By MS/MS 8 0 1 1 10253 0 10253 5907 691 6121 14579 10419 10419 1 0 87471 HEELMLGDPCLK GKDEDFKQYVNKNSKHEELMLGDPCLKDLK NSKHEELMLGDPCLKDLKKGDIIQLQRRGF K H E L K D 0 0 0 1 1 0 2 1 1 0 3 1 1 0 1 0 0 0 0 0 0 0 12 0 1440.6741 P07814 P07814 651 662 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 9.9458E-05 157.38 By MS/MS 3 0 1 1 547260 547260 0 5908 493 6122 14580 10420 10420 1 14286 0 HEFQAETK SIISSTESVQGSTSKHEFQAETKKLLDIVA VQGSTSKHEFQAETKKLLDIVARSLYSEKE K H E T K K 1 0 0 0 0 1 2 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 8 0 988.46141 Q12931 Q12931 88 95 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.0035006 146.23 By MS/MS By matching 5 0 2 1 1 1087000 1077700 9319.9 5909 1316 6123 14581;14582 10421 10421 1 44297 27578 HEFQAETKK SIISSTESVQGSTSKHEFQAETKKLLDIVA QGSTSKHEFQAETKKLLDIVARSLYSEKEV K H E K K L 1 0 0 0 0 1 2 0 1 0 0 2 0 1 0 0 1 0 0 0 0 0 9 1 1116.5564 Q12931 Q12931 88 96 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.019382 81.525 By MS/MS 5 0 1 1 0 0 0 5910 1316 6124 14583 10422 10422 1 0 0 HEGLGAFYK GQYSGIYDCAKKILKHEGLGAFYKGYVPNL AKKILKHEGLGAFYKGYVPNLLGIIPYAGI K H E Y K G 1 0 0 0 0 0 1 2 1 0 1 1 0 1 0 0 0 0 1 0 0 0 9 0 1020.5029 Q6NUK1 Q6NUK1 337 345 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2;3 0.00014174 167.9 By MS/MS 7 0 2 2 12798000 12798000 0 5911 1690 6125 14584;14585 10423;10424 10423 2 228700 0 HEILLSQSVR LVTSGAVAFGKQRLRHEILLSQSVRQALHS KQRLRHEILLSQSVRQALHSGQNQLKEMAI R H E V R Q 0 1 0 0 0 1 1 0 1 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1180.6564 P54886 P54886 129 138 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.00082193 131.12 By MS/MS By matching 5.33 0.471 2 1 2 1 5294200 5268500 25723 5912 1019 6126 14586;14587;14588 10425 10425 1 159290 76114 HEKEDGAISTIVLR VYLSEVGDTQVVVFKHEKEDGAISTIVLRG KHEKEDGAISTIVLRGSTDNLMDDIERAVD K H E L R G 1 1 0 1 0 0 2 1 1 2 1 1 0 0 0 1 1 0 0 1 0 0 14 1 1566.8366 P50990 P50990 365 378 CCT8 T-complex protein 1 subunit theta yes yes 2;3 1.6701E-17 240.18 By MS/MS 6.86 1.25 1 2 2 1 1 7 69306000 69306000 0 5913 955 6127 14589;14590;14591;14592;14593;14594;14595 10426;10427;10428;10429;10430 10427 5 833620 0 HELAEIVFK VLLRALPVPRAKHVKHELAEIVFKVGKVID RAKHVKHELAEIVFKVGKVIDPVTGKPCAG K H E F K V 1 0 0 0 0 0 2 0 1 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1084.5917 Q9Y2R5 Q9Y2R5 79 87 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 2 0.0012307 138.1 By MS/MS 9.5 0.5 1 1 2 4534200 4534200 0 5914 2898 6128 14596;14597 10431;10432 10432 2 4724600 0 HELLNSTR RILLAKERIRFVIKKHELLNSTREDLQLDK IRFVIKKHELLNSTREDLQLDKPASGVKEE K H E T R E 0 1 1 0 0 0 1 0 1 0 2 0 0 0 0 1 1 0 0 0 0 0 8 0 968.50394 P78347 P78347 436 443 GTF2I General transcription factor II-I yes yes 2 0.0082009 125.16 By MS/MS 3.5 0.5 1 1 2 2201600 2201600 0 5915 1194 6129 14598;14599 10433 10433 1 58040 0 HELQANCYEEVKDR ASSKDAIKKKLTGIKHELQANCYEEVKDRC KHELQANCYEEVKDRCTLAEKLGGSAVISL K H E D R C 1 1 1 1 1 1 3 0 1 0 1 1 0 0 0 0 0 0 1 1 0 0 14 1 1789.8053 P23528 P23528 133 146 CFL1 Cofilin-1 yes yes 3 0.025968 66.738 By MS/MS 10 0 1 1 170100 170100 0 5916 671 6130 14600 10434 10434 1 180800 0 HEMLPEFYK RRAAAKCLDAVVSTRHEMLPEFYKTVSPAL AVVSTRHEMLPEFYKTVSPALISRFKEREE R H E Y K T 0 0 0 0 0 0 2 0 1 0 1 1 1 1 1 0 0 0 1 0 0 0 9 0 1192.5587 Q86VP6 Q86VP6 365 373 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.027006 85.731 By MS/MS 3.5 0.5 1 1 2 693330 693330 0 5917 1829 6131 14601;14602 10435 10435 1271 1 18515 0 HEQILVLDPPTDLK ______________________________ KHEQILVLDPPTDLKFKGPFTDVVTTNLKL K H E L K F 0 0 0 2 0 1 1 0 1 1 3 1 0 0 2 0 1 0 0 1 0 0 14 0 1616.8774 Q9P0L0 Q9P0L0 11 24 VAPA Vesicle-associated membrane protein-associated protein A yes yes 2 9.8033E-06 168.61 By MS/MS 8 0 1 1 779480 779480 0 5918 2728 6132 14603 10436 10436 1 51422 0 HESETTTSLVLER MFRRPVLQVLRQFVRHESETTTSLVLERSL VRHESETTTSLVLERSLNRVHLLGRVGQDP R H E E R S 0 1 0 0 0 0 3 0 1 0 2 0 0 0 0 2 3 0 0 1 0 0 13 0 1500.742 Q04837 Q04837 16 28 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.0015639 151.79 By MS/MS 10 0 1 1 118500 118500 0 5919 1267 6133 14604 10437 10437 1 125960 0 HESGASIK GSIIGKGGQRIKQIRHESGASIKIDEPLEG QRIKQIRHESGASIKIDEPLEGSEDRIITI R H E I K I 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 2 0 0 0 0 0 0 8 0 827.41373 P61978 P61978 415 422 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 0.006069 133.12 By MS/MS By matching 6 0 2 1 1 2337800 2314500 23310 5920 1110 6134 14605;14606 10438 10438 1 18048 71491 HEVLLISAEQDKR QIKITGTKEGIEKARHEVLLISAEQDKRAV ARHEVLLISAEQDKRAVERLEVEKAFHPFI R H E K R A 1 1 0 1 0 1 2 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 13 1 1536.826 Q00341 Q00341 210 222 HDLBP Vigilin yes yes 3 0.00069254 143.76 By MS/MS 3 0 1 1 4743300 4743300 0 5921 1231 6135 14607 10439 10439 1 123830 0 HFDETVNR EQVLTLVNKRIGLYRHFDETVNRYKQSRDI KRIGLYRHFDETVNRYKQSRDISTLNSGKK R H F N R Y 0 1 1 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 1016.4676 P04843 P04843 495 502 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0090006 122.18 By MS/MS By matching 5 0 2 1 1 8012700 7972300 40365 5922 458 6136 14608;14609 10440 10440 1 327690 119440 HFDSQVIIYGK PQISKVANHMDGFQRHFDSQVIIYGKQVII GFQRHFDSQVIIYGKQVIINLINQKGSEKP R H F G K Q 0 0 0 1 0 1 0 1 1 2 0 1 0 1 0 1 0 0 1 1 0 0 11 0 1305.6717 Q9NTJ5 Q9NTJ5 291 301 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0015144 143.89 By MS/MS 3.5 2.5 1 1 2 3954400 3954400 0 5923 2631 6137 14610;14611 10441;10442 10441 2 56130 0 HFEALANR DIDKDNAKYVKKGTKHFEALANRAATTGHV YVKKGTKHFEALANRAATTGHVIDIYACAL K H F N R A 2 1 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 956.48281 Q15436 Q15436 330 337 SEC23A Protein transport protein Sec23A yes yes 2 0.0087099 140.98 By MS/MS 5 0 1 1 0 0 0 5924 1502 6138 14612 10443 10443 1 0 0 HFEQAIER ALIAARHLSDSINQKHFEQAIERVIGGLEK SDSINQKHFEQAIERVIGGLEKKTQVLQPE K H F E R V 1 1 0 0 0 1 2 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 8 0 1028.5039 Q9Y4W6 Q9Y4W6 544 551 AFG3L2 AFG3-like protein 2 yes yes 2 0.0082009 125.16 By MS/MS 6 0.816 1 1 1 3 14681000 14681000 0 5925 2960 6139 14613;14614;14615 10444;10445 10444 2 265710 0 HFLNITDPR DAPRWDQRTFLGRVKHFLNITDPRTVFVSE FLGRVKHFLNITDPRTVFVSERELDWAKVM K H F P R T 0 1 1 1 0 0 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 9 0 1111.5774 Q96NB2 Q96NB2 26 34 SFXN2 Sideroflexin-2 yes yes 2 0.050433 81.548 By MS/MS 8 0 1 1 1138400 1138400 0 5926 2231 6140 14616 10446 10446 1 75102 0 HFLPEMLSK ANEAVNGVREMRAPKHFLPEMLSKVIILSL EMRAPKHFLPEMLSKVIILSLDRSDEDKEK K H F S K V 0 0 0 0 0 0 1 0 1 0 2 1 1 1 1 1 0 0 0 0 0 0 9 0 1100.5689 P78344 P78344 576 584 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.026353 93.143 By MS/MS 4.5 0.5 1 1 2 1221400 1221400 0 5927 1192 6141 14617;14618 10447 10447 1 36466 0 HFNAPSHIR FNPFVTSDRSKNRKRHFNAPSHIRRKIMSS SKNRKRHFNAPSHIRRKIMSSPLSKELRQK R H F I R R 1 1 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1077.5468 P61254 P61254 18 26 RPL26 60S ribosomal protein L26 yes yes 3 0.00059492 139.98 By MS/MS 9 0 1 1 278800 278800 0 5928 1095 6142 14619 10448 10448 1 160010 0 HFRDVESQK KEGSALSHVRKIVEKHFRDVESQKILQRSQ RKIVEKHFRDVESQKILQRSQAQQPQKEAA K H F Q K I 0 1 0 1 0 1 1 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 9 1 1144.5625 Q3MHD2 Q3MHD2 169 177 LSM12 Protein LSM12 homolog yes yes 3 0.046074 76.17 By MS/MS 9 0 1 1 0 0 0 5929 1568 6143 14620 10449 10449 1 0 0 HFRPELEER ALGDGAAWPVQGLIRHFRPELEERMQRFAQ VQGLIRHFRPELEERMQRFAQQHQARQAAS R H F E R M 0 2 0 0 0 0 3 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 9 1 1211.6047 P49821 P49821 441 449 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 3 0.00023357 172.59 By MS/MS 6.5 0.5 1 1 2 4297900 4297900 0 5930 936 6144 14621;14622 10450 10450 1 68039 0 HFSAADASR PPPQVWQLISKVLARHFSAADASRVLEQLQ SKVLARHFSAADASRVLEQLQRDYERSLSR R H F S R V 3 1 0 1 0 0 0 0 1 0 0 0 0 1 0 2 0 0 0 0 0 0 9 0 960.44134 P11441 P11441 106 114 UBL4A Ubiquitin-like protein 4A yes yes 2 0.021756 95.741 By MS/MS 10 0 1 1 543240 543240 0 5931 554 6145 14623 10451 10451 1 577410 0 HFSGLEEAVYR PKAPGFAQMLKEGAKHFSGLEEAVYRNIQA EGAKHFSGLEEAVYRNIQACKELAQTTRTA K H F Y R N 1 1 0 0 0 0 2 1 1 0 1 0 0 1 0 1 0 0 1 1 0 0 11 0 1306.6306 P50990 P50990 21 31 CCT8 T-complex protein 1 subunit theta yes yes 2;3 1.2488E-10 200.56 By MS/MS 6.56 2.09 1 2 2 4 2 1 2 2 16 436200000 436200000 0 5932 955 6146 14624;14625;14626;14627;14628;14629;14630;14631;14632;14633;14634;14635;14636;14637;14638;14639 10452;10453;10454;10455;10456;10457;10458;10459;10460;10461 10461 10 7099800 0 HGAGSGQSLSHGR GHRGSGSSQSSGYGRHGAGSGQSLSHGRHG GRHGAGSGQSLSHGRHGSGSGQSSSYGQHG R H G G R H 1 1 0 0 0 1 0 4 2 0 1 0 0 0 0 3 0 0 0 0 0 0 13 0 1249.5912 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 2762 2774 HRNR Hornerin yes no 3 0.00018765 145.31 By matching By MS/MS 3.25 1.79 1 1 2 1 3 208470 78168 130300 + 5933 64 6147 14640;14641;14642;14643 10462;10463 10463 2 3213 283220 HGASPELQK AAQYACSLLGHALQRHGASPELQKQIRQLE GHALQRHGASPELQKQIRQLESHLSLGRKL R H G Q K Q 1 0 0 0 0 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 9 0 965.49304 O96011 O96011 35 43 PEX11B Peroxisomal membrane protein 11B yes yes 2 0.00019056 164.72 By MS/MS 9 0.816 1 1 1 3 1186200 1186200 0 5934 421 6148 14644;14645;14646 10464 10464 1 450320 0 HGDEIITSTTSNYETQTFSSK EQSQLTATQTRTVNKHGDEIITSTTSNYET TSTTSNYETQTFSSKTEWRVRAISAANLHL K H G S K T 0 0 1 1 0 1 2 1 1 2 0 1 0 1 0 4 5 0 1 0 0 0 21 0 2345.0659 Q6P2Q9 Q6P2Q9 2050 2070 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 0.040883 52.095 By MS/MS 2 0 1 1 348160 348160 0 5935 1706 6149 14647 10465 10465 1 17305 0 HGDLPDIQIK KMKQDAQVVLYRSYRHGDLPDIQIKHSSLI YRSYRHGDLPDIQIKHSSLITPLQAVAQRD R H G I K H 0 0 0 2 0 1 0 1 1 2 1 1 0 0 1 0 0 0 0 0 0 0 10 0 1134.6033 P78527 P78527 2777 2786 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.00074149 146.23 By MS/MS 2.2 1.17 2 1 1 1 5 12827000 12827000 0 5936 1197 6150 14648;14649;14650;14651;14652 10466;10467;10468;10469;10470;10471 10466 6 550250 0 HGDNREHPNEQ VAHPSQAPSPNQPTKHGDNREHPNEQ____ QPTKHGDNREHPNEQ_______________ K H G E Q - 0 1 2 1 0 1 2 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 11 1 1331.5603 P56545 P56545 435 445 CTBP2 C-terminal-binding protein 2 yes yes 2 0.0033658 144.55 By MS/MS 6 0 1 1 401830 401830 0 5937 1047 6151 14653 10472 10472 1 3133.5 0 HGDPGDAAQQEAK LEALRRQRLAELQAKHGDPGDAAQQEAKHR AKHGDPGDAAQQEAKHREAEMRNSILAQVL K H G A K H 3 0 0 2 0 2 1 2 1 0 0 1 0 0 1 0 0 0 0 0 0 0 13 0 1322.5851 O14737 O14737 21 33 PDCD5 Programmed cell death protein 5 yes yes 2 0.00013569 152.96 By MS/MS By matching 9.5 0.5 1 1 1 1 304230 296890 7338.4 5938 124 6152 14654;14655 10473 10473 1 315570 79087 HGDSLKEIK LYHSKYEELQVTVGRHGDSLKEIKIEISEL QVTVGRHGDSLKEIKIEISELNRVIQRLQG R H G I K I 0 0 0 1 0 0 1 1 1 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1025.5506 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 385 393 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 3 0.00014732 159.28 By MS/MS By MS/MS 3.7 2.41 2 2 2 2 1 1 5 5 2823800 1875200 948560 + 5939 52 6153 14656;14657;14658;14659;14660;14661;14662;14663;14664;14665 10474;10475;10476;10477;10478;10479;10480;10481 10478 8 391770 1950700 HGEIDYEAIVK ARLDILKIHAGPITKHGEIDYEAIVKLSDG PITKHGEIDYEAIVKLSDGFNGADLRNVCT K H G V K L 1 0 0 1 0 0 2 1 1 2 0 1 0 0 0 0 0 0 1 1 0 0 11 0 1272.635 P62333 P62333 323 333 PSMC6 26S protease regulatory subunit 10B yes yes 2 7.7396E-11 205.83 By MS/MS By MS/MS 7 0 2 1 1 30961000 30932000 29802 5940 1133 6154 14666;14667 10482;10483 10483 2 552750 122340 HGELWCAVSK QQEEVRKRCESAEPRHGELWCAVSKDIANW SAEPRHGELWCAVSKDIANWQKKIGDILRL R H G S K D 1 0 0 0 1 0 1 1 1 0 1 1 0 0 0 1 0 1 0 1 0 0 10 0 1185.5601 O94906 O94906 908 917 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.019743 92.538 By MS/MS 4 0 1 1 497170 497170 0 5941 358 6155 14668 10484 10484 1 13572 0 HGENIIDTLGAEVDRLEK QEVKTPEELETFMLKHGENIIDTLGAEVDR NIIDTLGAEVDRLEKELKKRNPEVRHVDLE K H G E K E 1 1 1 2 0 0 3 2 1 2 2 1 0 0 0 0 1 0 0 1 0 0 18 1 2008.0225 Q6PML9 Q6PML9 534 551 SLC30A9 Zinc transporter 9 yes yes 3 0.0040235 84.436 By MS/MS 6 0 1 1 1295300 1295300 0 5942 1720 6156 14669 10485 10485 1 10101 0 HGEPEEDIVGLQAFQER AEKKDPQGLGLHFYKHGEPEEDIVGLQAFQ EPEEDIVGLQAFQERLNSYKCITDTLQELV K H G E R L 1 1 0 1 0 2 4 2 1 1 1 0 0 1 1 0 0 0 0 1 0 0 17 0 1952.9228 O75694 O75694 952 968 NUP155 Nuclear pore complex protein Nup155 yes yes 3 0.0016101 112.03 By MS/MS 3.5 0.5 1 1 2 1030400 1030400 0 5943 324 6157 14670;14671 10486 10486 1 27077 0 HGFCGIPITDTGR SPKDRVRDVFEAKARHGFCGIPITDTGRMG ARHGFCGIPITDTGRMGSRLVGIISSRDID R H G G R M 0 1 0 1 1 0 0 3 1 2 0 0 0 1 1 0 2 0 0 0 0 0 13 0 1429.6772 P12268 P12268 137 149 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.00029478 143.5 By MS/MS 6.5 0.5 1 1 2 8876700 8876700 0 5944 564 6158 14672;14673 10487 10487 1 70805 0 HGFRQEYLDTLYR STRDGRMLFDYLADKHGFRQEYLDTLYRYA DKHGFRQEYLDTLYRYAKFQYECGNYSGAA K H G Y R Y 0 2 0 1 0 1 1 1 1 0 2 0 0 1 0 0 1 0 2 0 0 0 13 1 1696.8322 P60228 P60228 121 133 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 3 0.049516 59.155 By MS/MS 6 0 1 1 20301000 20301000 0 5945 1065 6159 14674 10488 10488 1 158310 0 HGGENVAAVLR LFYQLLHKVDKASVRHGGENVAAVLRAHGV ASVRHGGENVAAVLRAHGVRFIFTLVGGHI R H G L R A 2 1 1 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1121.5942 A1L0T0 A1L0T0 53 63 ILVBL Acetolactate synthase-like protein yes yes 2 0.0017574 123.51 By MS/MS 4.75 2.28 1 1 1 1 4 7182100 7182100 0 5946 8 6160 14675;14676;14677;14678 10489;10490 10490 2 69038 0 HGGGGGGFGGGGFGSR GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS GGGGGGFGGGGFGSRSLVGLGGTKSISISV R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 0 16 0 1319.5755 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 46 61 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 1.4701E-05 154.1 By MS/MS By MS/MS 5.6 2.8 3 2 3 3 4 3 3 3 3 3 11 19 11507000 8309100 3197700 + 5947 52 6161 14679;14680;14681;14682;14683;14684;14685;14686;14687;14688;14689;14690;14691;14692;14693;14694;14695;14696;14697;14698;14699;14700;14701;14702;14703;14704;14705;14706;14707;14708 10491;10492;10493;10494;10495;10496;10497;10498;10499;10500;10501;10502;10503;10504;10505;10506;10507;10508;10509;10510;10511 10504 21 1669400 19085000 HGGTIPIVPTAEFQDR LLMSVQESLERKFGKHGGTIPIVPTAEFQD GGTIPIVPTAEFQDRISGASEKDIVHSGLA K H G D R I 1 1 0 1 0 1 1 2 1 2 0 0 0 1 2 0 2 0 0 1 0 0 16 0 1736.8846 P00367 P00367 481 496 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2;3 5.1457E-08 173.19 By MS/MS 7.67 1.49 2 1 1 1 1 6 26881000 26881000 0 5948 425 6162 14709;14710;14711;14712;14713;14714 10512;10513 10512 2 395390 0 HGGTLSDLGK EYKRITRNVTCQDTRHGGTLSDLGKQVRSL CQDTRHGGTLSDLGKQVRSLKALVITIFNF R H G G K Q 0 0 0 1 0 0 0 3 1 0 2 1 0 0 0 1 1 0 0 0 0 0 10 0 983.50361 Q8N511 Q8N511 129 138 TMEM199 Transmembrane protein 199 yes yes 2 0.0096184 102.62 By MS/MS 9 0 1 1 0 0 0 5949 1918 6163 14715 10514 10514 1 0 0 HGGYKPSDEHK YEVFKDLFDPIIEDRHGGYKPSDEHKTDLN IEDRHGGYKPSDEHKTDLNPDNLQGGDDLD R H G H K T 0 0 0 1 0 0 1 2 2 0 0 2 0 0 1 1 0 0 1 0 0 0 11 1 1253.5789 P12277 P12277 97 107 CKB Creatine kinase B-type yes yes 2 0.033933 109.44 By MS/MS 7 0 1 1 194060 194060 0 5950 565 6164 14716 10515 10515 1 3467.9 0 HGIEYQEKPLLR NLHKIAPLVKSLCAKHGIEYQEKPLLRALL CAKHGIEYQEKPLLRALLDIIRSLKKSGKL K H G L R A 0 1 0 0 0 1 2 1 1 1 2 1 0 0 1 0 0 0 1 0 0 0 12 1 1481.7991 O95864 O95864 410 421 FADS2 Fatty acid desaturase 2 yes yes 3 0.0020208 108.98 By MS/MS 1 0 1 1 383230 383230 0 5951 411 6165 14717 10516 10516 1 18724 0 HGINCFINR AEKEKMKEKVERILKHGINCFINRQLIYNY VERILKHGINCFINRQLIYNYPEQLFGAAG K H G N R Q 0 1 2 0 1 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 9 0 1129.5451 P78371 P78371 285 293 CCT2 T-complex protein 1 subunit beta yes yes 2;3 4.7483E-06 178.6 By MS/MS 6.33 0.471 2 1 3 210150000 210150000 0 5952 1195 6166 14718;14719;14720 10517;10518;10519 10517 3 1664200 0 HGIPMSHVAR IGNPPDYRGQSCMKRHGIPMSHVARQITKE SCMKRHGIPMSHVARQITKEDFATFDYILC R H G A R Q 1 1 0 0 0 0 0 1 2 1 0 0 1 0 1 1 0 0 0 1 0 0 10 0 1103.5658 P24666 P24666 67 76 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 3 0.039688 76.282 By MS/MS 10 0 1 1 139880 139880 0 5953 679 6167 14721 10520 10520 453 1 148680 0 HGLEETAAK FAKLKSKLVLWDINKHGLEETAAKCKGLGA LWDINKHGLEETAAKCKGLGAKVHTFVVDC K H G A K C 2 0 0 0 0 0 2 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 9 0 954.47706 Q8NBQ5 Q8NBQ5 71 79 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 3.1285E-06 184.49 By MS/MS 8 0 1 1 579560 579560 0 5954 1944 6168 14722 10521 10521 1 38234 0 HGLYLPTR FMDTMLQMSILGSAKHGLYLPTRVTAIHID SILGSAKHGLYLPTRVTAIHIDPATHRQKL K H G T R V 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 0 1 0 1 0 0 0 8 0 955.52395 P49327 P49327 1044 1051 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0066989 130.77 By MS/MS 3 1.41 1 1 1 1 1 5 13687000 13687000 0 5955 915 6169 14723;14724;14725;14726;14727 10522;10523;10524;10525;10526 10522 5 494530 0 HGNLCLDK LYPLSHGFRKAIAERHGNLCLDKINVLHKP RKAIAERHGNLCLDKINVLHKPPYEHPKDL R H G D K I 0 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 955.45455 O15294 O15294 527 534 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.01563 112.41 By MS/MS 4 0 1 1 226410 226410 0 5956 167 6170 14728 10527 10527 1 6180.7 0 HGNLDQK INSIKHGENKTVTFKHGNLDQKNKSKNKSL ENKTVTFKHGNLDQKNKSKNKSLMIKDSIQ K H G Q K N 0 0 1 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 7 0 810.39842 Q9UKA4 Q9UKA4 530 536 AKAP11 A-kinase anchor protein 11 yes yes 2 0.031822 113.7 By MS/MS 2 0 1 1 150070 150070 0 5957 2809 6171 14729 10528 10528 1 7459.2 0 HGNSHQGEPR SNYELEGKIKEWYEKHGNSHQGEPRDYSKY EWYEKHGNSHQGEPRDYSKYYKTIDDLKNQ K H G P R D 0 1 1 0 0 1 1 2 2 0 0 0 0 0 1 1 0 0 0 0 0 0 10 0 1117.5013 CON__P13645;P13645 CON__P13645 185 194 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.0041972 125.97 By MS/MS By MS/MS 4.56 2.63 3 1 3 3 2 2 1 1 1 1 13 5 1427400 1151300 276130 + 5958 49 6172 14730;14731;14732;14733;14734;14735;14736;14737;14738;14739;14740;14741;14742;14743;14744;14745;14746;14747 10529;10530;10531;10532;10533 10531 5 84825 539970 HGSGSGQSPGHGQR GQHESASHHASGRGRHGSGSGQSPGHGQRG RHGSGSGQSPGHGQRGSGSGQSPSYGRHGS R H G Q R G 0 1 0 0 0 2 0 5 2 0 0 0 0 0 1 3 0 0 0 0 0 0 14 0 1347.6028 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 883 896 HRNR Hornerin yes no 2;3 0.0024864 114.71 By MS/MS By MS/MS 4.73 2.69 1 3 2 1 4 1 2 1 7 8 338070 155300 182780 + 5959 64 6173 14748;14749;14750;14751;14752;14753;14754;14755;14756;14757;14758;14759;14760;14761;14762 10534;10535;10536;10537;10538;10539;10540;10541 10536 8 30049 395100 HGSGSGQSPSPSR GQHGSGSRQSLGHSRHGSGSGQSPSPSRGR SRHGSGSGQSPSPSRGRHESGSRQSSSYGP R H G S R G 0 1 0 0 0 1 0 3 1 0 0 0 0 0 2 5 0 0 0 0 0 0 13 0 1239.5592 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 533 545 HRNR Hornerin yes no 2 0.00071803 134.84 By matching By MS/MS 2.86 1.25 1 2 2 1 1 3 4 483560 111930 371630 + 5960 64 6174 14763;14764;14765;14766;14767;14768;14769 10542;10543;10544 10543 3 4077 676430 HGSSSGSSSSYGQHGSGSR EQHGSRSGQSSRSEQHGSSSGSSSSYGQHG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS Q H G S R Q 0 1 0 0 0 1 0 5 2 0 0 0 0 0 0 9 0 0 1 0 0 0 19 0 1807.747 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 973 991 HRNR Hornerin yes no 3 0.001392 98.227 By MS/MS By MS/MS 4 1.51 1 1 2 2 1 3 4 1403500 998800 404720 + 5961 64 6175 14770;14771;14772;14773;14774;14775;14776 10545;10546;10547 10546 3 35387 900850 HGSVSADEAAR GGPGAQLGASFLQARHGSVSADEAARTAPF LQARHGSVSADEAARTAPFHLDLWFYFTLQ R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 Q9NWW5 Q9NWW5 29 39 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes yes 2 6.7373E-07 183.72 By MS/MS By matching 4.75 3.27 1 1 2 3 1 2287200 2257000 30217 5962 2673 6176 14777;14778;14779;14780 10548;10549 10549 1 133940 257790 HGSYEDAVHSGALND IDDLIKLHPESKDDKHGSYEDAVHSGALND HGSYEDAVHSGALND_______________ K H G N D - 2 0 1 2 0 0 1 2 2 0 1 0 0 0 0 2 0 0 1 1 0 0 15 0 1570.6648 P17987 P17987 542 556 TCP1 T-complex protein 1 subunit alpha yes yes 2 2.4095E-28 234.63 By MS/MS 3.5 2.06 1 1 1 1 4 22060000 22060000 0 5963 619 6177 14781;14782;14783;14784 10550;10551 10550 2 200870 0 HGTALQR SKVEDLSTCNDLIAKHGTALQRSLSELESL TCNDLIAKHGTALQRSLSELESLKLPAESN K H G Q R S 1 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 781.41949 P22059 P22059 231 237 OSBP Oxysterol-binding protein 1 yes yes 2 0.023423 119.56 By MS/MS 4 0 1 1 0 0 0 5964 654 6178 14785 10552 10552 1 0 0 HGTTHGQTGDTTR AGSQHGESGSTVHGRHGTTHGQTGDTTRHA GRHGTTHGQTGDTTRHAHYHHGKSTQRGSS R H G T R H 0 1 0 1 0 1 0 3 2 0 0 0 0 0 0 0 5 0 0 0 0 0 13 0 1367.6178 CON__Q5D862;Q5D862 CON__Q5D862 1465 1477 FLG2 Filaggrin-2 yes no 3 0.0089349 86.699 By MS/MS 7.5 0.5 1 1 2 20578 0 20578 + 5965 60 6179 14786;14787 10553 10553 1 0 108110 HGVESTLER VQELASPSLLFIFVRHGVESTLERSAIARE LFIFVRHGVESTLERSAIAREHMGQLLHQL R H G E R S 0 1 0 0 0 0 2 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1026.5094 Q04637 Q04637 1281 1289 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.00025345 160.63 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 78488000 78488000 0 5966 1264 6180 14788;14789;14790;14791;14792;14793;14794;14795 10554;10555;10556;10557;10558 10555 5 3418600 0 HGVIVAADSR IEMLHGTTTLAFKFRHGVIVAADSRATAGA AFKFRHGVIVAADSRATAGAYIASQTVKKV R H G S R A 2 1 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 2 0 0 10 0 1023.5461 P28074 P28074 69 78 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.0001535 159.58 By MS/MS By matching 9.33 0.471 2 1 2 1 5801900 5768500 33458 5967 715 6181 14796;14797;14798 10559;10560 10559 2 3337000 360580 HGVYNPNK PVNSTIPITAEVFKKHGVYNPNKIFGVTTL TAEVFKKHGVYNPNKIFGVTTLDIVRANTF K H G N K I 0 0 2 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 1 1 0 0 8 0 927.45626 P40926 P40926 158 165 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0073376 128.38 By MS/MS 8 0.816 1 1 1 3 1521100 1521100 0 5968 832 6182 14799;14800;14801 10561 10561 1 109740 0 HGYAPSDLPVK KIYQVLDFRIRCGMKHGYAPSDLPVKAKRS CGMKHGYAPSDLPVKAKRSTYNYSLPITVK K H G V K A 1 0 0 1 0 0 0 1 1 0 1 1 0 0 2 1 0 0 1 1 0 0 11 0 1182.6033 Q9Y5Q8 Q9Y5Q8 329 339 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.0051256 107.21 By MS/MS 6.5 0.5 1 1 2 5152700 5152700 0 5969 2977 6183 14802;14803 10562 10562 1 41831 0 HGYIGEFEIIDDHR PCSKVIVRFLTVMMKHGYIGEFEIIDDHRA KHGYIGEFEIIDDHRAGKIVVNLTGRLNKC K H G H R A 0 1 0 2 0 0 2 2 2 3 0 0 0 1 0 0 0 0 1 0 0 0 14 0 1699.7954 P62244 P62244 44 57 RPS15A 40S ribosomal protein S15a yes yes 3 6.4485E-06 137.09 By MS/MS 10 0 1 1 1021400 1021400 0 5970 1119 6184 14804 10563 10563 1 1085700 0 HGYVVGR DLSEQEQNQLNVLKKHGYVVGRVGRTFLYS NQLNVLKKHGYVVGRVGRTFLYSEEQKDNI K H G G R V 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 1 2 0 0 7 0 786.41367 Q8NC60 Q8NC60 432 438 NOA1 Nitric oxide-associated protein 1 yes yes 2 0.01389 143.22 By MS/MS 5.5 0.5 1 1 2 1948700 1948700 0 5971 1951 6185 14805;14806 10564 10564 1 56834 0 HHAEVVKK PWPEVVLPDPVEETRHHAEVVKKVNEMIVT DPVEETRHHAEVVKKVNEMIVTGQYGRLFA R H H K K V 1 0 0 0 0 0 1 0 2 0 0 2 0 0 0 0 0 0 0 2 0 0 8 1 946.53485 Q7Z2W9 Q7Z2W9 75 82 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 3 0.014229 93.374 By MS/MS 9.5 0.5 1 1 2 51349 51349 0 5972 1778 6186 14807;14808 10565 10565 1 36423 0 HHAISAK KLPGDKGLVLMSRAKHHAISAKLNKPFLFD LVLMSRAKHHAISAKLNKPFLFDTKPLIVQ K H H A K L 2 0 0 0 0 0 0 0 2 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 762.41367 P27824 P27824 128 134 CANX Calnexin yes yes 2 0.042356 106.42 By MS/MS 4 0 1 1 206130 206130 0 5973 711 6187 14809 10566 10566 1 5627.2 0 HHCLELAK QYALFLESVTEFEQRHHCLELAKEADLDVA VTEFEQRHHCLELAKEADLDVATITKTVVE R H H A K E 1 0 0 0 1 0 1 0 2 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 1006.5018 P57740 P57740 619 626 NUP107 Nuclear pore complex protein Nup107 yes yes 3 0.0093707 110.31 By MS/MS 4 0 1 1 342970 342970 0 5974 1057 6188 14810 10567 10567 1 9362.6 0 HHEDNLLR EIISNAAEYENIPIRHHEDNLLRQLAQKVP YENIPIRHHEDNLLRQLAQKVPHKLNNPKF R H H L R Q 0 1 1 1 0 0 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1032.5101 O75643 O75643 1862 1869 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 3 0.0051143 118.74 By MS/MS 1.5 0.5 1 1 2 450640 450640 0 5975 322 6189 14811;14812 10568 10568 1 22063 0 HHIETGGGQLPAK PIAVSGVRGMGFLMRHHIETGGGQLPAKLS MRHHIETGGGQLPAKLSSLFVKCLQNPSSD R H H A K L 1 0 0 0 0 1 1 3 2 1 1 1 0 0 1 0 1 0 0 0 0 0 13 0 1343.6946 Q92616 Q92616 2538 2550 GCN1L1 Translational activator GCN1 yes yes 2;3 9.4333E-06 166.11 By MS/MS 2 0.707 1 2 1 4 2102700 2102700 0 5976 2068 6190 14813;14814;14815;14816 10569;10570;10571 10570 2 98318 0 HHNQSTAINLNNPESQSMHLETR KLCDNLRMHLSQIQRHHNQSTAINLNNPES NLNNPESQSMHLETRLVQLDSAISMELWQE R H H T R L 1 1 4 0 0 2 2 0 3 1 2 0 1 0 1 3 2 0 0 0 0 0 23 0 2657.2365 Q14152 Q14152 211 233 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 4 0.011454 54.457 By MS/MS 3 0 1 1 2149600 2149600 0 5977 1409 6191 14817 10572 10572 1083 1 56117 0 HHYEQQQEDLAR QEESVDPDYWEKLLRHHYEQQQEDLARNLG LLRHHYEQQQEDLARNLGKGKRIRKQVNYN R H H A R N 1 1 0 1 0 3 2 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 12 0 1552.7019 Q14839;Q8TDI0;Q12873 Q14839 1320 1331 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.00055598 133.05 By MS/MS 1.5 0.5 1 1 2 641810 641810 0 5978 1449 6192 14818;14819 10573;10574 10574 2 31684 0 HIDLVEGDEGR IIGTGTNACYMEELRHIDLVEGDEGRMCIN EELRHIDLVEGDEGRMCINTEWGAFGDDGS R H I G R M 0 1 0 2 0 0 2 2 1 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1238.5891 P19367 P19367 244 254 HK1 Hexokinase-1 yes yes 2;3 0.00012008 158.79 By MS/MS 4.33 0.471 2 1 3 5053100 5053100 0 5979 630 6193 14820;14821;14822 10575;10576 10575 2 143350 0 HIDMVEGDEGR IVGTGSNACYMEEMRHIDMVEGDEGRMCIN EEMRHIDMVEGDEGRMCINMEWGAFGDDGS R H I G R M 0 1 0 2 0 0 2 2 1 1 0 0 1 0 0 0 0 0 0 1 0 0 11 0 1256.5455 P52789 P52789 244 254 HK2 Hexokinase-2 yes yes 2 0.0015739 125.97 By MS/MS 4 0 1 1 551780 551780 0 5980 992 6194 14823 10577 10577 1 15063 0 HIDPVVLK DAQADEAVLDHPDLKHIDPVVLKHCHAAAA LDHPDLKHIDPVVLKHCHAAAATYILEAGK K H I L K H 0 0 0 1 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 2 0 0 8 0 919.5491 Q9UBI1 Q9UBI1 53 60 COMMD3 COMM domain-containing protein 3 yes yes 2 0.014636 113.7 By MS/MS 9 0 1 1 404600 404600 0 5981 2750 6195 14824 10578 10578 1 232200 0 HIDQLKER PLLIVEKQKLLLKKRHIDQLKEREYNNYSW KLLLKKRHIDQLKEREYNNYSWQDLVASGV R H I E R E 0 1 0 1 0 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1037.5618 P30876 P30876 639 646 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.0072935 128.36 By MS/MS 4 0.816 1 1 1 3 1749100 1749100 0 5982 748 6196 14825;14826;14827 10579 10579 1 46437 0 HIEEGLGR PSPVVLKVYKNELHRHIEEGLGRNMSDRCS YKNELHRHIEEGLGRNMSDRCSTAITNSLQ R H I G R N 0 1 0 0 0 0 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 909.46683 O95140 O95140 469 476 MFN2 Mitofusin-2 yes yes 2 0.0043405 143.11 By MS/MS 5 0 1 1 1018700 1018700 0 5983 366 6197 14828 10580 10580 1 41874 0 HIEIFTDLSSR DVIQHETIGKKFEKRHIEIFTDLSSRFSKS FEKRHIEIFTDLSSRFSKSQLDIIIHSLKK R H I S R F 0 1 0 1 0 0 1 0 1 2 1 0 0 1 0 2 1 0 0 0 0 0 11 0 1316.6725 P13010 P13010 131 141 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.0015739 125.97 By MS/MS 5 0 1 1 1173700 1173700 0 5984 570 6198 14829 10581 10581 1 48245 0 HIGLVYSGMGPDYR LYDERSVHKVEPITKHIGLVYSGMGPDYRV KHIGLVYSGMGPDYRVLVHRARKLAQQYYL K H I Y R V 0 1 0 1 0 0 0 3 1 1 1 0 1 0 1 1 0 0 2 1 0 0 14 0 1563.7504 P25787 P25787 71 84 PSMA2 Proteasome subunit alpha type-2 yes yes 3 0.0051817 97.69 By MS/MS 9 0 1 1 326850 326850 0 5985 689 6199 14830 10582 10582 464 1 187580 0 HIHFDVVK ALERFYEQVVQAIQRHIHFDVVKCILVASP VVQAIQRHIHFDVVKCILVASPGFVREQFC R H I V K C 0 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 2 0 0 8 0 993.5396 Q9BRX2 Q9BRX2 196 203 PELO Protein pelota homolog yes yes 3 0.042842 92.47 By MS/MS 7 0 1 1 2515700 2515700 0 5986 2331 6200 14831 10583 10583 1 44957 0 HIIEDTEEAR VEERLEYALVKGIEKHIIEDTEEARLNQKK KGIEKHIIEDTEEARLNQKKYPRPLNIIEG K H I A R L 1 1 0 1 0 0 3 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1211.5782 Q99707 Q99707 686 695 MTR Methionine synthase yes yes 2 0.0019201 135.71 By MS/MS 3.5 0.5 1 1 2 1314200 1314200 0 5987 2284 6201 14832;14833 10584 10584 1 34419 0 HIIEDTEEARLNQK VEERLEYALVKGIEKHIIEDTEEARLNQKK KHIIEDTEEARLNQKKYPRPLNIIEGPLMN K H I Q K K 1 1 1 1 0 1 3 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 14 1 1694.8588 Q99707 Q99707 686 699 MTR Methionine synthase yes yes 3 0.033305 62.732 By MS/MS 3 0 1 1 776430 776430 0 5988 2284 6202 14834 10585 10585 1 20269 0 HIKENDYYTPTGEFR FLWMVRIGGSTDTGKHIKENDYYTPTGEFR HIKENDYYTPTGEFRVDREGSPVLLNCLMY K H I F R V 0 1 1 1 0 0 2 1 1 1 0 1 0 1 1 0 2 0 2 0 0 0 15 1 1868.8693 P46977 P46977 611 625 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 3 0.0047109 93.237 By MS/MS 1 0 1 1 331430 331430 0 5989 893 6203 14835 10586 10586 1 16193 0 HIMEGAENTAVCSR H I S R 2 1 1 0 1 0 2 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 14 0 1573.6977 REV__Q96RW7 yes yes 2 0.010144 94.409 By MS/MS By matching 8.5 0.5 2 2 3 1 7626900 7241800 385150 + 5990 3040 6204 14836;14837;14838;14839 10587 10587 1 4063500 3285800 HINDSAPEVR LPKSLLKPFCAALLKHINDSAPEVRDAAFE AALLKHINDSAPEVRDAAFEALGTALKVVG K H I V R D 1 1 1 1 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 10 0 1136.5574 Q14008 Q14008 447 456 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00047609 145.9 By MS/MS 1.5 0.5 1 1 2 4024900 4024900 0 5991 1405 6205 14840;14841 10588 10588 1 200000 0 HIQKEDVPSER ISSSEEIVPNSVEQKHIQKEDVPSERYLGY VEQKHIQKEDVPSERYLGYLEQLLRLKKYK K H I E R Y 0 1 0 1 0 1 2 0 1 1 0 1 0 0 1 1 0 0 0 1 0 0 11 1 1336.6735 CON__P02662 CON__P02662 80 90 yes yes 2;3 0.00044446 149.94 By MS/MS 6.33 1.37 2 2 1 1 6 17269000 17269000 0 + 5992 37 6206 14842;14843;14844;14845;14846;14847 10589;10590;10591;10592 10589 3 692660 0 HISPGDTK THSTHPDDEDSGPYKHISPGDTKVVVENGE EDSGPYKHISPGDTKVVVENGELIMGILCK K H I T K V 0 0 0 1 0 0 0 1 1 1 0 1 0 0 1 1 1 0 0 0 0 0 8 0 853.42938 P24928 P24928 620 627 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.019355 107.59 By MS/MS 2 0 1 1 197350 197350 0 5993 681 6207 14848 10593 10593 1 9809.1 0 HISPQAK WAIMAAPLFMSNDLRHISPQAKALLQDKDV LFMSNDLRHISPQAKALLQDKDVIAINQDP R H I A K A 1 0 0 0 0 1 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 7 0 779.42899 P06280 P06280 302 308 GLA Alpha-galactosidase A yes yes 2 0.022143 120.49 By MS/MS By matching 6.67 0.471 1 2 2 1 1795600 1790600 4999.7 5994 476 6208 14849;14850;14851 10594;10595 10595 2 24560 20525 HITGLCGK LSQFVSPFTGCIYGRHITGLCGKKQKEITK TGCIYGRHITGLCGKKQKEITKAIKRAQIM R H I G K K 0 0 0 0 1 0 0 2 1 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 884.45382 Q9Y3D5 Q9Y3D5 95 102 MRPS18C 28S ribosomal protein S18c, mitochondrial yes yes 2 0.033563 97.798 By MS/MS 10 0 1 1 924840 924840 0 5995 2931 6209 14852 10596 10596 1 983000 0 HITIFSPEGR ______________________________ AGFDRHITIFSPEGRLYQVEYAFKAINQGG R H I G R L 0 1 0 0 0 0 1 1 1 2 0 0 0 1 1 1 1 0 0 0 0 0 10 0 1155.6037 P60900 P60900 12 21 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.00029365 153.05 By MS/MS 8.5 0.5 1 1 2 3947200 3947200 0 5996 1077 6210 14853;14854 10597;10598 10597 2 495760 0 HIVENAVQK EKFVPYYDLFMPSLKHIVENAVQKELRLLR FMPSLKHIVENAVQKELRLLRGKTIECISL K H I Q K E 1 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 9 0 1036.5665 O00410 O00410 540 548 IPO5 Importin-5 yes yes 2 0.0029142 138.06 By MS/MS 5 1.41 1 1 1 1 1 5 9676900 9676900 0 5997 91 6211 14855;14856;14857;14858;14859 10599 10599 1 246640 0 HIVENAVQKELR EKFVPYYDLFMPSLKHIVENAVQKELRLLR SLKHIVENAVQKELRLLRGKTIECISLIGL K H I L R L 1 1 1 0 0 1 2 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 12 1 1434.7943 O00410 O00410 540 551 IPO5 Importin-5 yes yes 3 0.0025509 104.24 By MS/MS 4 0 1 1 820130 820130 0 5998 91 6212 14860 10600 10600 1 22389 0 HIVKEFK DTFLGGEDFDQALLRHIVKEFKRETGVDLT DFDQALLRHIVKEFKRETGVDLTKDNMALQ R H I F K R 0 0 0 0 0 0 1 0 1 1 0 2 0 1 0 0 0 0 0 1 0 0 7 1 899.52289 P38646 P38646 285 291 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.0068802 132.09 By MS/MS By MS/MS 5 0 2 1 1 3998400 3973000 25374 5999 820 6213 14861;14862 10601;10602 10602 2 163310 75082 HIYYITGETK VSLKDYCTRMKENQKHIYYITGETKDQVAN KENQKHIYYITGETKDQVANSAFVERLRKH K H I T K D 0 0 0 0 0 0 1 1 1 2 0 1 0 0 0 0 2 0 2 0 0 0 10 0 1223.6186 P07900;Q58FG0 P07900 490 499 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 2;3 0.0008884 137.14 By MS/MS By matching 4.88 2.03 1 3 1 1 1 1 7 1 28245000 28177000 67849 6000 494 6214 14863;14864;14865;14866;14867;14868;14869;14870 10603;10604;10605;10606;10607 10604 5 732080 141780 HKDIDILIVR ANVIHCKSLPGVVTRHKDIDILIVRENTEG GVVTRHKDIDILIVRENTEGEYSSLEHESV R H K V R E 0 1 0 2 0 0 0 0 1 3 1 1 0 0 0 0 0 0 0 1 0 0 10 1 1220.7241 P51553 P51553 158 167 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 3 0.0042447 105.98 By MS/MS 7.5 0.5 1 1 2 8509900 8509900 0 6001 966 6215 14871;14872 10608 10608 1 169770 0 HKDLQQQLVDAK EQYELREEHIDKVFKHKDLQQQLVDAKLQQ VFKHKDLQQQLVDAKLQQAQEMLKEAEERH K H K A K L 1 0 0 2 0 3 0 0 1 0 2 2 0 0 0 0 0 0 0 1 0 0 12 1 1421.7627 P40222 P40222 329 340 TXLNA Alpha-taxilin yes yes 3 0.0069853 91.093 By MS/MS 5 0 1 1 1009000 1009000 0 6002 827 6216 14873 10609 10609 1 41472 0 HKEQNNDSQLK AQDTVIKAKYAEVAKHKEQNNDSQLKIKEL EVAKHKEQNNDSQLKIKELDHNISKHKREA K H K L K I 0 0 2 1 0 2 1 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 11 1 1339.648 O95347 O95347 899 909 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.0027675 110.93 By MS/MS 3 0 1 1 293470 293470 0 6003 385 6217 14874 10610 10610 1 7661 0 HKEVEAAQGVK PPPMKELRVKNQYEKHKEVEAAQGVKILGK QYEKHKEVEAAQGVKILGKDLEKTLAGLPL K H K V K I 2 0 0 0 0 1 2 1 1 0 0 2 0 0 0 0 0 0 0 2 0 0 11 1 1194.6357 O60841 O60841 922 932 EIF5B Eukaryotic translation initiation factor 5B yes yes 3 0.036914 68.515 By MS/MS 3 0 1 1 336590 336590 0 6004 271 6218 14875 10611 10611 1 8786.7 0 HKLDVTSVEDYK AILTCPFEPPKPKTKHKLDVTSVEDYKALQ KTKHKLDVTSVEDYKALQKYEKEKFEEMIQ K H K Y K A 0 0 0 2 0 0 1 0 1 0 1 2 0 0 0 1 1 0 1 2 0 0 12 1 1432.7198 P48643 P48643 264 275 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 2.0384E-05 176.32 By MS/MS By matching 6 1.15 1 2 3 2 1 7 2 202940000 202860000 70644 6005 909 6219 14876;14877;14878;14879;14880;14881;14882;14883;14884 10612;10613;10614;10615 10614 4 1696300 187260 HKLDVTSVEDYKALQK AILTCPFEPPKPKTKHKLDVTSVEDYKALQ KLDVTSVEDYKALQKYEKEKFEEMIQQIKE K H K Q K Y 1 0 0 2 0 1 1 0 1 0 2 3 0 0 0 1 1 0 1 2 0 0 16 2 1872.9945 P48643 P48643 264 279 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.0047355 99.711 By MS/MS 6 0 1 1 10751000 10751000 0 6006 909 6220 14885 10616 10616 1 83837 0 HKLPNQGEDR GSVEEDALLCGPVSKHKLPNQGEDRRVPQN GPVSKHKLPNQGEDRRVPQNWFPIFNPERS K H K D R R 0 1 1 1 0 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 10 1 1192.5949 Q9BQP7 Q9BQP7 85 94 MGME1 Mitochondrial genome maintenance exonuclease 1 yes yes 3 0.011307 82.494 By MS/MS 8 0 1 1 619720 619720 0 6007 2318 6221 14886 10617 10617 1 40883 0 HKSETDTSLIR DEPIDLFMIEIMEMKHKSETDTSLIRGLVL MEMKHKSETDTSLIRGLVLDHGARHPDMKK K H K I R G 0 1 0 1 0 0 1 0 1 1 1 1 0 0 0 2 2 0 0 0 0 0 11 1 1285.6626 P40227 P40227 198 208 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 3.0532E-06 183.99 By MS/MS 6.1 2.21 1 1 1 2 2 2 1 10 202000000 202000000 0 6008 828 6222 14887;14888;14889;14890;14891;14892;14893;14894;14895;14896 10618;10619;10620;10621;10622;10623 10620 6 1832700 0 HKTTGQVVAMK EKIGEGTYGVVYKGRHKTTGQVVAMKKIRL YKGRHKTTGQVVAMKKIRLESEEEGVPSTA R H K M K K 1 0 0 0 0 1 0 1 1 0 0 2 1 0 0 0 2 0 0 2 0 0 11 1 1198.6492 P06493 P06493 23 33 CDK1 Cyclin-dependent kinase 1 yes yes 3 0.010271 86.463 By MS/MS 8 0 1 1 366350 366350 0 6009 477 6223 14897 10624 10624 261 1 24168 0 HKTVGSDEAQR LKSLGDQYVKDEFRRHKTVGSDEAQRFLQE EFRRHKTVGSDEAQRFLQEWEVYATALLQQ R H K Q R F 1 1 0 1 0 1 1 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 11 1 1226.6004 Q9NRP4 Q9NRP4 42 52 SDHAF3 Succinate dehydrogenase assembly factor 3, mitochondrial yes yes 3 0.023146 76.522 By MS/MS 10 0 1 1 48965 48965 0 6010 2610 6224 14898 10625 10625 1 52044 0 HLAAVEER TAAAAALASAATKAKHLAAVEERKIKSLVA SAATKAKHLAAVEERKIKSLVALLVETQMK K H L E R K 2 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 923.48248 Q8TAQ2;Q92922 Q92922 883 890 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 2 0.038372 95.909 By MS/MS 3 0.816 1 1 1 3 1382700 1382700 0 6011 2090;1983 6225 14899;14900;14901 10626 10626 1 45300 0 HLADHGQLSGIQR RGVKRRWRLSRIVFRHLADHGQLSGIQRAT FRHLADHGQLSGIQRATW____________ R H L Q R A 1 1 0 1 0 2 0 2 2 1 2 0 0 0 0 1 0 0 0 0 0 0 13 0 1430.7379 O60783 O60783 113 125 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 3 0.0027623 112.02 By MS/MS By matching 10 0 2 1 1 1777500 1756300 21184 6012 265 6226 14902;14903 10627 10627 1 1866700 543360 HLAEHSPYYEAMK RAGTRNIYYLCAPNRHLAEHSPYYEAMKKK NRHLAEHSPYYEAMKKKDTEVLFCFEQFDE R H L M K K 2 0 0 0 0 0 2 0 2 0 1 1 1 0 1 1 0 0 2 0 0 0 13 0 1574.7188 Q12931 Q12931 506 518 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.045527 64.945 By MS/MS 5 0 1 1 1186600 1186600 0 6013 1316 6227 14904 10628 10628 1 48774 0 HLAGEVAK GSQEELASWGHEYVRHLAGEVAKEWQELDD WGHEYVRHLAGEVAKEWQELDDAEKVQREP R H L A K E 2 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 823.4552 Q13200 Q13200 161 168 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.019355 107.59 By MS/MS By matching 4 0 2 1 1 3293200 3269300 23855 6014 1347 6228 14905;14906 10629 10629 1 89248 49847 HLAGLGLTEAIDK SLPKGVVEVTHDLQKHLAGLGLTEAIDKNK QKHLAGLGLTEAIDKNKADLSRMSGKKDLY K H L D K N 2 0 0 1 0 0 1 2 1 1 3 1 0 0 0 0 1 0 0 0 0 0 13 0 1336.7351 P50454 P50454 320 332 SERPINH1 Serpin H1 yes yes 2 1.2311E-05 212.28 By MS/MS 6.5 0.5 1 1 2 14126000 14126000 0 6015 947 6229 14907;14908 10630;10631 10631 2 157310 0 HLAGLGLTEAIDKNK SLPKGVVEVTHDLQKHLAGLGLTEAIDKNK HLAGLGLTEAIDKNKADLSRMSGKKDLYLA K H L N K A 2 0 1 1 0 0 1 2 1 1 3 2 0 0 0 0 1 0 0 0 0 0 15 1 1578.873 P50454 P50454 320 334 SERPINH1 Serpin H1 yes yes 3 1.0582E-14 203.74 By MS/MS 6.5 0.5 1 1 2 9782800 9782800 0 6016 947 6230 14909;14910 10632 10632 1 97764 0 HLAILSK HFYRDSTFRCKILDRHLAILSKKHLETKFL FRCKILDRHLAILSKKHLETKFLKLNVEKA R H L S K K 1 0 0 0 0 0 0 0 1 1 2 1 0 0 0 1 0 0 0 0 0 0 7 0 780.48577 O14530 O14530 110 116 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 2 0.020731 124.37 By MS/MS 8 0 1 1 1148900 1148900 0 6017 112 6231 14911 10633 10633 1 75793 0 HLANMMGEDPETFTQEDIDR DFIKKQIEEFNIGKRHLANMMGEDPETFTQ MGEDPETFTQEDIDRAIAYLFPSGLFEKRA R H L D R A 1 1 1 3 0 1 3 1 1 1 1 0 2 1 1 0 2 0 0 0 0 0 20 0 2348.0049 P82933 P82933 87 106 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 0.00026491 113.49 By MS/MS 7 0 2 2 2587400 2587400 0 6018 1211 6232;6233 14912;14913 10634;10635 10635 995;996 2 46237 0 HLCISGTPK LQSTFHAQACEELFKHLCISGTPKIRLHTG CEELFKHLCISGTPKIRLHTGLLLVQLCGG K H L P K I 0 0 0 0 1 0 0 1 1 1 1 1 0 0 1 1 1 0 0 0 0 0 9 0 1011.5172 Q9NR09 Q9NR09 2065 2073 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.00053928 152.47 By MS/MS 1 0 1 1 391680 391680 0 6019 2596 6234 14914 10636 10636 1 19137 0 HLDKSDPK AVRQSVVVLMGSLAKHLDKSDPKVKPIVAK LMGSLAKHLDKSDPKVKPIVAKLIAALSTP K H L P K V 0 0 0 2 0 0 0 0 1 0 1 2 0 0 1 1 0 0 0 0 0 0 8 1 938.48214 Q92616 Q92616 1329 1336 GCN1L1 Translational activator GCN1 yes yes 2 0.04896 131.03 By MS/MS 2 0.816 1 1 1 3 649010 649010 0 6020 2068 6235 14915;14916;14917 10637 10637 1 30158 0 HLDLASLK KDIRGETLNHHVNARHLDLASLKSIREFAA NHHVNARHLDLASLKSIREFAAKIIEEEER R H L L K S 1 0 0 1 0 0 0 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 895.51272 Q8NBN7 Q8NBN7 95 102 RDH13 Retinol dehydrogenase 13 yes yes 2 0.0066277 131.03 By MS/MS 8 0 1 1 3313000 3313000 0 6021 1943 6236 14918 10638 10638 1 218560 0 HLDMADLEAK IDGIRLCKAHKYRYRHLDMADLEAKLQEAQ KYRYRHLDMADLEAKLQEAQKHRLRLVATD R H L A K L 2 0 0 2 0 0 1 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 10 0 1141.5438 O75600 O75600 178 187 GCAT 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes yes 2 0.018943 95.502 By MS/MS 7 0 1 1 1172500 1172500 0 6022 318 6237 14919 10639 10639 1 20953 0 HLDQIIPR LLARMKIDPEAFITRHLDQIIPRMTTQSPL PEAFITRHLDQIIPRMTTQSPLNQSSMNAM R H L P R M 0 1 0 1 0 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 8 0 990.56106 Q92616 Q92616 705 712 GCN1L1 Translational activator GCN1 yes yes 2 0.019122 107.9 By MS/MS 2 0.816 1 1 1 3 2637600 2637600 0 6023 2068 6238 14920;14921;14922 10640;10641 10641 2 96429 0 HLEAILTK TGEETEGMDGQIYKRHLEAILTKISLKNNL DGQIYKRHLEAILTKISLKNNLDHLLASLL R H L T K I 1 0 0 0 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 0 0 0 8 0 923.54402 Q9H583 Q9H583 378 385 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.051613 101.33 By MS/MS 2 0 1 1 140330 140330 0 6024 2503 6239 14923 10642 10642 1 6975.3 0 HLEHECPER CPACKGLVRLGEKERHLEHECPERSLSCRH LGEKERHLEHECPERSLSCRHCRAPCCGAD R H L E R S 0 1 0 0 1 0 3 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 9 0 1205.5248 Q12933 Q12933 151 159 TRAF2 TNF receptor-associated factor 2 yes yes 3 0.022384 81.95 By MS/MS 6.5 0.5 1 1 2 1751800 1751800 0 6025 1317 6240 14924;14925 10643 10643 1 16776 0 HLEINPDHPIVETLR ALRDNSTMGYMMAKKHLEINPDHPIVETLR HLEINPDHPIVETLRQKAEADKNDKAVKDL K H L L R Q 0 1 1 1 0 0 2 0 2 2 2 0 0 0 2 0 1 0 0 1 0 0 15 0 1781.9424 P08238 P08238 625 639 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 5.6525E-40 249.28 By MS/MS 5.67 1.49 2 1 1 1 1 6 62412000 62412000 0 6026 501 6241 14926;14927;14928;14929;14930;14931 10644;10645;10646;10647 10645 4 1922200 0 HLEINPDHSIIETLR ALRDNSTMGYMAAKKHLEINPDHSIIETLR HLEINPDHSIIETLRQKAEADKNDKSVKDL K H L L R Q 0 1 1 1 0 0 2 0 2 3 2 0 0 0 1 1 1 0 0 0 0 0 15 0 1785.9373 P07900 P07900 633 647 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.0022192 107.74 By MS/MS 5 0.816 1 1 1 3 11750000 11750000 0 6027 494 6242 14932;14933;14934 10648 10648 1 237070 0 HLEQQAEK MGSVSTEPDDEEGLKHLEQQAEKMVAYLQD DDEEGLKHLEQQAEKMVAYLQDSALDDERL K H L E K M 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 981.48796 Q6Y7W6 Q6Y7W6 490 497 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 7.4466E-05 176.44 By MS/MS 3 0 1 1 0 0 0 6028 1736 6243 14935 10649 10649 1 0 0 HLESFPK DDDGSEFHEHIFLEKHLESFPKQGPIRHFM HEHIFLEKHLESFPKQGPIRHFMELVTCGL K H L P K Q 0 0 0 0 0 0 1 0 1 0 1 1 0 1 1 1 0 0 0 0 0 0 7 0 856.4443 Q92665 Q92665 337 343 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.042356 106.42 By MS/MS 7 0 1 1 2641500 2641500 0 6029 2073 6244 14936 10650 10650 1 47204 0 HLESWCVQR THQQKVLRLYKRALRHLESWCVQRDKYRYF YKRALRHLESWCVQRDKYRYFACLMRARFE R H L Q R D 0 1 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 0 9 0 1213.5662 Q9Y6M9 Q9Y6M9 26 34 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 2 0.0015667 134.48 By MS/MS 9 0 1 1 513300 513300 0 6030 3010 6245 14937 10651 10651 1 294590 0 HLETGGQK TRAASIYSSWAEEQRHLETGGQKIEADSRT SWAEEQRHLETGGQKIEADSRTLWAHCWCP R H L Q K I 0 0 0 0 0 1 1 2 1 0 1 1 0 0 0 0 1 0 0 0 0 0 8 0 868.44028 Q92538 Q92538 1522 1529 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0039198 143.11 By MS/MS 2 0 1 1 829670 829670 0 6031 2055 6246 14938 10652 10652 1 41239 0 HLEVISGQK YKAVKSEANATQLLRHLEVISGQKLTRLFT ATQLLRHLEVISGQKLTRLFTSNQILTSEC R H L Q K L 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 9 0 1009.5556 Q8TCG1 Q8TCG1 32 40 KIAA1524 Protein CIP2A yes yes 2 0.004042 117.81 By MS/MS 4 0 1 1 1166900 1166900 0 6032 1994 6247 14939 10653 10653 1 31855 0 HLIPAANTGESK ELKLICCDILDVLDKHLIPAANTGESKVFY LDKHLIPAANTGESKVFYYKMKGDYHRYLA K H L S K V 2 0 1 0 0 0 1 1 1 1 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1236.6463 P62258 P62258 107 118 YWHAE 14-3-3 protein epsilon yes yes 2 0.01395 92.611 By MS/MS By matching 8 0 2 1 1 8790400 8774200 16165 6033 1121 6248 14940;14941 10654 10654 1 578830 137910 HLITTQTEHK IAIKGVARFYRSRKKHLITTQTEHKCVLDS RSRKKHLITTQTEHKCVLDSCRSLEAEGFQ K H L H K C 0 0 0 0 0 1 1 0 2 1 1 1 0 0 0 0 3 0 0 0 0 0 10 0 1206.6357 Q9Y697 Q9Y697 148 157 NFS1 Cysteine desulfurase, mitochondrial yes yes 3 0.00014607 154.01 By MS/MS 7 0 1 1 1872600 1872600 0 6034 2998 6249 14942 10655 10655 1 33464 0 HLLIGVSSDR LYEKADIKGPEDKKKHLLIGVSSDRGLCGA EDKKKHLLIGVSSDRGLCGAIHSSIAKQMK K H L D R G 0 1 0 1 0 0 0 1 1 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1095.6037 P36542 P36542 91 100 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.013407 96.948 By MS/MS 8.5 0.5 1 1 2 25726000 25726000 0 6035 805 6250 14943;14944 10656 10656 1 1783500 0 HLLPVETQR WVYLEGIFTGSADIKHLLPVETQRFQSIST GSADIKHLLPVETQRFQSISTEFLALMKKV K H L Q R F 0 1 0 0 0 1 1 0 1 0 2 0 0 0 1 0 1 0 0 1 0 0 9 0 1091.6087 Q14204 Q14204 1559 1567 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.030753 90.657 By MS/MS 1.5 0.5 1 1 2 1932200 1932200 0 6036 1421 6251 14945;14946 10657 10657 1 94548 0 HLLQQCR PDSSPETPIQNPVVKHLLQQCRLVERILTS PIQNPVVKHLLQQCRLVERILTSWEENDRV K H L C R L 0 1 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 953.48652 Q9UPN7 Q9UPN7 432 438 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 2 0.046884 103.29 By MS/MS 4 0 1 1 838500 838500 0 6037 2851 6252 14947 10658 10658 1 22890 0 HLLVSNVGGDGEEIER GSLMFHKLRPVDQLRHLLVSNVGGDGEEIE LLVSNVGGDGEEIERFFKLHQEDQACATCL R H L E R F 0 1 1 1 0 0 3 3 1 1 2 0 0 0 0 1 0 0 0 2 0 0 16 0 1722.8537 O75694 O75694 522 537 NUP155 Nuclear pore complex protein Nup155 yes yes 3 0.014333 60.542 By MS/MS 3.5 0.5 1 1 2 1301500 1301500 0 6038 324 6253 14948;14949 10659 10659 1 34545 0 HLNQEVAVR AKVENLQPEIKTIARHLNQEVAVRANQLGW IKTIARHLNQEVAVRANQLGWSKRDARLTY R H L V R A 1 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 1064.5727 Q8N8Q8 Q8N8Q8 125 133 COX18 Mitochondrial inner membrane protein COX18 yes yes 2 0.010578 103.55 By MS/MS 8.5 0.5 1 1 2 716290 716290 0 6039 1933 6254 14950;14951 10660 10660 1 118770 0 HLQAVDYASR FSYYGLTVWFPDMIRHLQAVDYASRTKVFP PDMIRHLQAVDYASRTKVFPGERVEHVTFN R H L S R T 2 1 0 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 1 0 0 10 0 1158.5782 Q7L0J3 Q7L0J3 474 483 SV2A Synaptic vesicle glycoprotein 2A yes yes 2 0.012683 114.51 By MS/MS 1 0 1 1 303880 303880 0 6040 1760 6255 14952 10661 10661 1 14847 0 HLQEASATDGK LCCGAILFPVVWSIRHLQEASATDGKGDSM WSIRHLQEASATDGKGDSMGPLQQRANLRA R H L G K G 2 0 0 1 0 1 1 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1155.552 Q5VW38 Q5VW38 425 435 GPR107 Protein GPR107 yes yes 2 0.011948 95.523 By MS/MS 1 0 1 1 0 0 0 6041 1655 6256 14953 10662 10662 1 0 0 HLQLAIRNDEELNK GNAARDNKKTRIIPRHLQLAIRNDEELNKL RHLQLAIRNDEELNKLLGKVTIAQGGVLPN R H L N K L 1 1 2 1 0 1 2 0 1 1 3 1 0 0 0 0 0 0 0 0 0 0 14 1 1691.8955 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104 Q99878 83 96 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX yes no 3 0.021705 70.54 By MS/MS 10 0 1 1 611760 611760 0 6042 461 6257 14954 10663 10663 1 650230 0 HLRDEGLR KRLQGEMMKLSEENRHLRDEGLRLRKVAHS KLSEENRHLRDEGLRLRKVAHSDKPGSTST R H L L R L 0 2 0 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 994.53083 Q9P0L0 Q9P0L0 195 202 VAPA Vesicle-associated membrane protein-associated protein A yes yes 3 0.020579 98.299 By MS/MS By matching 8.33 0.471 2 1 2 1 7813100 7790500 22626 6043 2728 6258 14955;14956;14957 10664 10664 1 616650 193030 HLSASQK MDRRDHPLPEVAHVKHLSASQKALKEKEKA LPEVAHVKHLSASQKALKEKEKASWSSLSM K H L Q K A 1 0 0 0 0 1 0 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 7 0 769.40825 P13073 P13073 54 60 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.0012691 162.31 By MS/MS 10 0 1 1 0 0 0 6044 571 6259 14958 10665 10665 1 0 0 HLSDSINQK DVANVCNEAALIAARHLSDSINQKHFEQAI ALIAARHLSDSINQKHFEQAIERVIGGLEK R H L Q K H 0 0 1 1 0 1 0 0 1 1 1 1 0 0 0 2 0 0 0 0 0 0 9 0 1040.5251 Q9Y4W6 Q9Y4W6 535 543 AFG3L2 AFG3-like protein 2 yes yes 2 0.010364 104.01 By MS/MS 6 0.816 1 1 1 3 3101400 3101400 0 6045 2960 6260 14959;14960;14961 10666 10666 1 88356 0 HLSSLTDNEQADIFER IEGLYPPRAKLVIQRHLSSLTDNEQADIFE LSSLTDNEQADIFERVQKMKPVSDQEENEL R H L E R V 1 1 1 2 0 1 2 0 1 1 2 0 0 1 0 2 1 0 0 0 0 0 16 0 1873.8806 O60343 O60343 483 498 TBC1D4 TBC1 domain family member 4 yes yes 2 6.1237E-11 193.51 By MS/MS 3.5 0.5 1 1 2 1905400 1905400 0 6046 246 6261 14962;14963 10667 10667 1 49912 0 HLSSQNR LKKYRGMGSLDAMDKHLSSQNRYFSEADKI GSLDAMDKHLSSQNRYFSEADKIKVAQGVS K H L N R Y 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 7 0 840.42021 P12268 P12268 423 429 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.030478 114.59 By MS/MS 6 0 1 1 0 0 0 6047 564 6262 14964 10668 10668 1 0 0 HLSVNDLPVGR ALRGLFIIDPNGVIKHLSVNDLPVGRSVEE GVIKHLSVNDLPVGRSVEETLRLVKAFQYV K H L G R S 0 1 1 1 0 0 0 1 1 0 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1205.6517 P30048 P30048 197 207 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 2;3 3.8154E-07 188.87 By MS/MS 9.33 0.471 2 1 3 6893100 6893100 0 6048 731 6263 14965;14966;14967 10669;10670;10671 10669 3 4086000 0 HLTASEAK EDMDCLTFGSPVLMRHLTASEAKKLPIQEF GSPVLMRHLTASEAKKLPIQEFHLSRILQE R H L A K K 2 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 8 0 855.44503 P39748 P39748 193 200 FEN1 Flap endonuclease 1 yes yes 2 0.0036598 145.04 By MS/MS By matching 6.67 0.471 1 2 2 1 9726600 9712300 14321 6049 826 6264 14968;14969;14970 10672;10673 10673 2 161590 58792 HLTGEFEK LVGDGGTGKTTFVKRHLTGEFEKKYVATLG KTTFVKRHLTGEFEKKYVATLGVEVHPLVF R H L E K K 0 0 0 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 8 0 959.47125 P62826 P62826 30 37 RAN GTP-binding nuclear protein Ran yes yes 2 0.0016943 161.68 By MS/MS 9.5 0.5 1 1 2 4339900 4339900 0 6050 1146 6265 14971;14972 10674 10674 1 2514700 0 HLTGEFEKK LVGDGGTGKTTFVKRHLTGEFEKKYVATLG TTFVKRHLTGEFEKKYVATLGVEVHPLVFH R H L K K Y 0 0 0 0 0 0 2 1 1 0 1 2 0 1 0 0 1 0 0 0 0 0 9 1 1087.5662 P62826 P62826 30 38 RAN GTP-binding nuclear protein Ran yes yes 2;3 0.00040894 143.03 By MS/MS 8.67 0.471 1 2 3 3316700 3316700 0 6051 1146 6266 14973;14974;14975 10675;10676 10675 2 1773700 0 HLTHAQSTLDAK LWLVLPGVLVLDAVKHLTHAQSTLDAKATK AVKHLTHAQSTLDAKATKAKSKKN______ K H L A K A 2 0 0 1 0 1 0 0 2 0 2 1 0 0 0 1 2 0 0 0 0 0 12 0 1320.6786 Q15125 Q15125 210 221 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 2;3 1.4678E-43 266.26 By MS/MS 4.8 3.49 1 1 1 2 5 5224200 5224200 0 6052 1482 6267 14976;14977;14978;14979;14980 10677;10678;10679;10680 10680 4 2327200 0 HLTHENVQR EAQIYEYVEILGEQRHLTHENVQRKQARTG ILGEQRHLTHENVQRKQARTGEEREEEEEE R H L Q R K 0 1 1 0 0 1 1 0 2 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1132.5738 Q12874 Q12874 339 347 SF3A3 Splicing factor 3A subunit 3 yes yes 2 0.03245 89.698 By MS/MS 6 0 1 1 1401400 1401400 0 6053 1311 6268 14981 10681 10681 1 10928 0 HLTPVTLELGGK GNTAVGKIVMEAAAKHLTPVTLELGGKSPC AAKHLTPVTLELGGKSPCYIDKDCDLDIVC K H L G K S 0 0 0 0 0 0 1 2 1 0 3 1 0 0 1 0 2 0 0 1 0 0 12 0 1263.7187 P51648;P48448;P30838;P43353 P51648 200 211 ALDH3A2;ALDH3B2;ALDH3A1;ALDH3B1 Fatty aldehyde dehydrogenase;Aldehyde dehydrogenase family 3 member B2;Aldehyde dehydrogenase, dimeric NADP-preferring;Aldehyde dehydrogenase family 3 member B1 yes no 2 0.012081 94.692 By MS/MS 7.5 1.12 1 1 1 1 4 16177000 16177000 0 6054 972 6269 14982;14983;14984;14985 10682 10682 1 180270 0 HLTSNSPR KPAIVEAGGMQALGKHLTSNSPRLVQNCLW GMQALGKHLTSNSPRLVQNCLWTLRNLSDV K H L P R L 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 0 0 8 0 910.46208 P14923 P14923 360 367 JUP Junction plakoglobin yes yes 2 0.021557 104.75 By matching By MS/MS 5.25 0.829 1 1 2 1 3 723400 470760 252630 6055 595 6270 14986;14987;14988;14989 10683;10684 10683 2 3671 648960 HLTYENVER YRGAVGALLVYDIAKHLTYENVERWLKELR VYDIAKHLTYENVERWLKELRDHADSNIVI K H L E R W 0 1 1 0 0 0 2 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 9 0 1159.5622 P62491;Q15907 P62491 96 104 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0091407 106.68 By MS/MS 9 0 1 1 1642300 1642300 0 6056 1136 6271 14990 10685 10685 1 942530 0 HLVAGGGAGAVSR DEFTVEERQTGMWWRHLVAGGGAGAVSRTC WRHLVAGGGAGAVSRTCTAPLDRLKVLMQV R H L S R T 3 1 0 0 0 0 0 4 1 0 1 0 0 0 0 1 0 0 0 2 0 0 13 0 1150.6207 Q6KCM7 Q6KCM7 189 201 SLC25A25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 2 0.0047433 104.82 By MS/MS 6.5 0.5 1 1 2 2193000 2193000 0 6057 1686 6272 14991;14992 10686 10686 1 23098 0 HLVDEPQNLIK DDPHACYSTVFDKLKHLVDEPQNLIKQNCD DKLKHLVDEPQNLIKQNCDQFEKLGEYGFQ K H L I K Q 0 0 1 1 0 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1304.7089 CON__P02769 CON__P02769 402 412 yes yes 2 0.00024846 152.97 By MS/MS By matching 6.33 0.471 2 1 2 1 11813000 11773000 39864 + 6058 43 6273 14993;14994;14995 10687 10687 1 97214 122260 HLVDPIDDLFLAAK AADGNYYNARKMNIKHLVDPIDDLFLAAKK KHLVDPIDDLFLAAKKIPGISSTGVGDGGN K H L A K K 2 0 0 3 0 0 0 0 1 1 3 1 0 1 1 0 0 0 0 1 0 0 14 0 1565.8453 Q7Z3D6 Q7Z3D6 455 468 C14orf159 UPF0317 protein C14orf159, mitochondrial yes yes 2;3 7.4277E-08 180.97 By MS/MS 6 0 2 2 1641500 1641500 0 6059 1783 6274 14996;14997 10688;10689 10689 2 12801 0 HLVGVCYTEDEAK QVCASCHSMDFVAYRHLVGVCYTEDEAKEL YRHLVGVCYTEDEAKELAAEVEVQDGPNED R H L A K E 1 0 0 1 1 0 2 1 1 0 1 1 0 0 0 0 1 0 1 2 0 0 13 0 1519.6977 P08574 P08574 134 146 CYC1 Cytochrome c1, heme protein, mitochondrial yes yes 2;3 0.0019627 112.71 By MS/MS 8.5 0.5 2 2 4 7756900 7756900 0 6060 505 6275 14998;14999;15000;15001 10690;10691 10690 1 798170 0 HLVSPEALDLLDK HSRKRWENFIHSENRHLVSPEALDLLDKLL NRHLVSPEALDLLDKLLRYDHQQRLTAKEA R H L D K L 1 0 0 2 0 0 1 0 1 0 4 1 0 0 1 1 0 0 0 1 0 0 13 0 1448.7875 P19784 P19784 292 304 CSNK2A2 Casein kinase II subunit alpha yes yes 2 0.00038163 138.99 By MS/MS 7.5 0.5 1 1 2 842140 842140 0 6061 636 6276 15002;15003 10692 10692 1 18520 0 HLVYESDKNKDEK WILPQDYDHAQAEARHLVYESDKNKDEKLT ARHLVYESDKNKDEKLTKEEILENWNMFVG R H L E K L 0 0 1 2 0 0 2 0 1 0 1 3 0 0 0 1 0 0 1 1 0 0 13 2 1603.7842 Q15293 Q15293 287 299 RCN1 Reticulocalbin-1 yes yes 3 0.042912 92.247 By MS/MS 7 0 1 1 1050600 1050600 0 6062 1489 6277 15004 10693 10693 1 18774 0 HLVYESDQNKDGK WILPSDYDHAEAEARHLVYESDQNKDGKLT ARHLVYESDQNKDGKLTKEEIVDKYDLFVG R H L G K L 0 0 1 2 0 1 1 1 1 0 1 2 0 0 0 1 0 0 1 1 0 0 13 1 1531.7267 O43852 O43852 272 284 CALU Calumenin yes yes 2;3 0.0011219 147.3 By MS/MS 7.33 0.471 2 1 3 4121000 4121000 0 6063 231 6278 15005;15006;15007 10694;10695 10694 2 88960 0 HMKQLGAGDVDR AWRSYQLRKHLSHLRHMKQLGAGDVDRWRQ HLRHMKQLGAGDVDRWRQESTALLLQVWRK R H M D R W 1 1 0 2 0 1 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 12 1 1325.651 Q9Y283 Q9Y283 941 952 INVS Inversin yes yes 2 0.012391 113.66 By MS/MS By matching 4.25 0.829 1 1 2 1 3 279030 183950 95089 6064 2875 6279 15008;15009;15010;15011 10696 10696 1662 0 7560.9 220650 HNDMADLER QKGLQASRSDIKLFKHNDMADLERLLKEQE DIKLFKHNDMADLERLLKEQEIEDQKNPRK K H N E R L 1 1 1 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 9 0 1099.4717 O15269 O15269 211 219 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.00027334 159.34 By MS/MS 6 0 1 1 8362600 8362600 0 6065 165 6280 15012 10697 10697 1 65212 0 HNEETGDNVGPLIIK WRSKKFPFCDGAHTKHNEETGDNVGPLIIK HNEETGDNVGPLIIKKKET___________ K H N I K K 0 0 2 1 0 0 2 2 1 2 1 1 0 0 1 0 1 0 0 1 0 0 15 0 1634.8264 Q9NZ45 Q9NZ45 90 104 CISD1 CDGSH iron-sulfur domain-containing protein 1 yes yes 2;3 6.2146E-21 228.61 By MS/MS 10 0 2 2 1176400 1176400 0 6066 2707 6281 15013;15014 10698;10699 10699 2 1250400 0 HNELTGDNVGPLILK WRSKTFPACDGSHNKHNELTGDNVGPLILK HNELTGDNVGPLILKKKEV___________ K H N L K K 0 0 2 1 0 0 1 2 1 1 3 1 0 0 1 0 1 0 0 1 0 0 15 0 1618.8679 Q8N5K1 Q8N5K1 117 131 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 3 0.017537 75.02 By MS/MS 10 0 1 1 553610 553610 0 6067 1921 6282 15015 10700 10700 1 588420 0 HNESVVK WMEGLTLQDYSEHCKHNESVVKEMLELAKN QDYSEHCKHNESVVKEMLELAKNYNKAVEE K H N V K E 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 7 0 811.41882 O00487 O00487 240 246 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 2 0.019073 133.6 By MS/MS 8 0 1 1 0 0 0 6068 100 6283 15016 10701 10701 1 0 0 HNFQGIEK LERHTFLNIAEHFEKHNFQGIEKITQVSMA IAEHFEKHNFQGIEKITQVSMASLKELDQR K H N E K I 0 0 1 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 0 0 8 0 971.48248 Q96KP1 Q96KP1 736 743 EXOC2 Exocyst complex component 2 yes yes 2 0.013245 115.49 By MS/MS 4 0 1 1 935070 935070 0 6069 2221 6284 15017 10702 10702 1 25526 0 HNIQALLK EEARSLRECELYVQKHNIQALLKDSIVQLC CELYVQKHNIQALLKDSIVQLCTARPERPM K H N L K D 1 0 1 0 0 1 0 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 935.55525 P10644 P10644 25 32 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 0.0016554 162.31 By MS/MS 6 0 1 1 9118900 9118900 0 6070 542 6285 15018 10703 10703 1 71109 0 HNITLLWDR VNKELNFWAKRAKQRHNITLLWDREVADVL KRAKQRHNITLLWDREVADVLVDGYNVHYG R H N D R E 0 1 1 1 0 0 0 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 9 0 1166.6196 Q9H078 Q9H078 595 603 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.0019217 130.66 By MS/MS 6 0 1 1 3147100 3147100 0 6071 2448 6286 15019 10704 10704 1 24541 0 HNNLDLVIIR ANVVHVKSLPGYMTRHNNLDLVIIREQTEG GYMTRHNNLDLVIIREQTEGEYSSLEHESA R H N I R E 0 1 2 1 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1205.6881 O43837 O43837 155 164 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2;3 7.8814E-07 185.6 By MS/MS 7 0 2 2 15440000 15440000 0 6072 230 6287 15020;15021 10705;10706 10705 2 275910 0 HNQLPLVIEFTEQTAPK FEGEVTKENLLDFIKHNQLPLVIEFTEQTA QLPLVIEFTEQTAPKIFGGEIKTHILLFLP K H N P K I 1 0 1 0 0 2 2 0 1 1 2 1 0 1 2 0 2 0 0 1 0 0 17 0 1964.0367 P07237 P07237 231 247 P4HB Protein disulfide-isomerase yes yes 3 0.00129 114.01 By MS/MS 6 0 1 1 2311500 2311500 0 6073 487 6288 15022 10707;10708 10707 2 18025 0 HNTAVSQLTK KMDVAQSELDIYLSRHNTAVSQLTKAKEAL IYLSRHNTAVSQLTKAKEALIAASETLKER R H N T K A 1 0 1 0 0 1 0 0 1 0 1 1 0 0 0 1 2 0 0 1 0 0 10 0 1097.5829 Q9NTJ3 Q9NTJ3 513 522 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0003193 152.04 By MS/MS 2.5 1.12 1 1 1 1 4 2263000 2263000 0 6074 2630 6289 15023;15024;15025;15026 10709 10709 1 66018 0 HNTPEDAK RIIFDDFREAYYWLRHNTPEDAKVMSWWDY EAYYWLRHNTPEDAKVMSWWDYGYQITAMA R H N A K V 1 0 1 1 0 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 8 0 910.41446 P46977 P46977 514 521 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00029482 188.98 By MS/MS 3 2.16 1 1 1 3 1136900 1136900 0 6075 893 6290 15027;15028;15029 10710;10711;10712 10711 3 47832 0 HNVIVGR RSYRDQTIVDPFSSKHNVIVGRNGSGKSNF IVDPFSSKHNVIVGRNGSGKSNFFYAIQFV K H N G R N 0 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 793.45587 Q9UQE7 Q9UQE7 27 33 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.024601 118.69 By MS/MS 3.5 0.5 1 1 2 2754300 2754300 0 6076 2860 6291 15030;15031 10713 10713 1 73462 0 HPAATAQLETAVR KLRLLGLRYQEYVTRHPAATAQLETAVRGF TRHPAATAQLETAVRGFSYLLAGRFADSHE R H P V R G 4 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 2 0 0 1 0 0 13 0 1363.7208 Q9Y5Y5 Q9Y5Y5 18 30 PEX16 Peroxisomal membrane protein PEX16 yes yes 2;3 0.002492 117.09 By MS/MS 7.33 0.471 2 1 3 3630900 3630900 0 6077 2988 6292 15032;15033;15034 10714;10715 10714 2 73802 0 HPDVEVDGFSELR WYHFSCFWKVGHSIRHPDVEVDGFSELRWD IRHPDVEVDGFSELRWDDQQKVKKTAEAGG R H P L R W 0 1 0 2 0 0 2 1 1 0 1 0 0 1 1 1 0 0 0 2 0 0 13 0 1498.7052 P09874 P09874 66 78 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.0010347 130.94 By MS/MS 4 0 2 2 6348600 6348600 0 6078 521 6293 15035;15036 10716;10717 10716 2 173310 0 HPELADK KEGVMVAKKDVHMPKHPELADKNVPNLHVM KKDVHMPKHPELADKNVPNLHVMKAMQSLK K H P D K N 1 0 0 1 0 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 7 0 808.40792 P46783;Q9NQ39 P46783 32 38 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 0.012279 147.69 By MS/MS By matching 9 0 2 1 1 857290 809340 47952 6079 889 6294 15037;15038 10718 10718 1 464490 516780 HPENYDLATLK SAVVVQGLPEGVAFKHPENYDLATLKWILE VAFKHPENYDLATLKWILENKAGISFIIKR K H P L K W 1 0 1 1 0 0 1 0 1 0 2 1 0 0 1 0 1 0 1 0 0 0 11 0 1299.6459 P78347 P78347 161 171 GTF2I General transcription factor II-I yes yes 2 0.0202 89.171 By MS/MS 3 0 1 1 2079500 2079500 0 6080 1194 6295 15039 10719 10719 1 54286 0 HPGSFDVVHVK GANLGRIGVITNRERHPGSFDVVHVKDANG NRERHPGSFDVVHVKDANGNSFATRLSNIF R H P V K D 0 0 0 1 0 0 0 1 2 0 0 1 0 1 1 1 0 0 0 3 0 0 11 0 1220.6302 P62701;P22090 P62701 201 211 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 2;3 6.5337E-05 145.46 By MS/MS By MS/MS 8 0 3 2 1 7207500 7142600 64873 6081 1140 6296 15040;15041;15042 10720;10721;10722 10721 3 471200 553450 HPLTQELK HLSRDIDVIRGNIVKHPLTQELKECEGIVP IRGNIVKHPLTQELKECEGIVPVPLAEKLY K H P L K E 0 0 0 0 0 1 1 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 8 0 964.53418 P82932 P82932 96 103 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.021557 104.75 By MS/MS 10 0 1 1 529810 529810 0 6082 1210 6297 15043 10723 10723 1 563130 0 HPNIVSLQDVLMQDSR PSTAIREISLLKELRHPNIVSLQDVLMQDS PNIVSLQDVLMQDSRLYLIFEFLSMDLKKY R H P S R L 0 1 1 2 0 2 0 0 1 1 2 0 1 0 1 2 0 0 0 2 0 0 16 0 1850.9309 P06493 P06493 60 75 CDK1 Cyclin-dependent kinase 1 yes yes 3 0.037145 62.525 By MS/MS 8 0 1 1 371980 371980 0 6083 477 6298 15044 10724 10724 262 0 24539 0 HPQPGAVELAAK SVQTMSCYADVVVLRHPQPGAVELAAKHCR VLRHPQPGAVELAAKHCRRPVINAGDGVGE R H P A K H 3 0 0 0 0 1 1 1 1 0 1 1 0 0 2 0 0 0 0 1 0 0 12 0 1216.6564 P27708 P27708 2025 2036 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0036786 112.71 By MS/MS 2.5 1.12 1 1 1 1 4 2079300 2079300 0 6084 709 6299 15045;15046;15047;15048 10725;10726 10726 2 94211 0 HPSAVTACNLDLENLVTDSNR LRYAAVRTLNKVAMKHPSAVTACNLDLENL ACNLDLENLVTDSNRSIATLAITTLLKTGS K H P N R S 2 1 3 2 1 0 1 0 1 0 3 0 0 0 1 2 2 0 0 2 0 0 21 0 2325.1019 Q9Y678 Q9Y678 318 338 COPG1 Coatomer subunit gamma-1 yes yes 3 0.00080798 87.356 By MS/MS 4 0 1 1 682370 682370 0 6085 2996 6300 15049 10727 10727 1 18628 0 HPSLSIGVLEK GGIVGLASARALILRHPSLSIGVLEKEKDL LILRHPSLSIGVLEKEKDLAVHQTGHNSGV R H P E K E 0 0 0 0 0 0 1 1 1 1 2 1 0 0 1 2 0 0 0 1 0 0 11 0 1178.6659 Q9H9P8 Q9H9P8 71 81 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.014388 94.409 By MS/MS 7 0 1 1 1951000 1951000 0 6086 2536 6301 15050 10728 10728 1 34864 0 HQATGELDDAK LDNLQAKGKERQWLRHQATGELDDAKIIDG QWLRHQATGELDDAKIIDGLTGEKAIYKRR R H Q A K I 2 0 0 2 0 1 1 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 11 0 1183.5469 A3KMH1 A3KMH1 1673 1683 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0011893 131.12 By MS/MS 2.5 0.5 1 1 2 972820 972820 0 6087 13 6302 15051;15052 10729 10729 1 45555 0 HQDVATR AMAIDTLLISDELFRHQDVATRSRYVRLVD LISDELFRHQDVATRSRYVRLVDSVKENAG R H Q T R S 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 7 0 825.40931 Q9BRX2 Q9BRX2 320 326 PELO Protein pelota homolog yes yes 2 0.011074 151.04 By MS/MS 7.5 0.5 1 1 2 1085100 1085100 0 6088 2331 6303 15053;15054 10730 10730 1 22277 0 HQDVPSQDDSKPTQR HHFVAVALRKPDGSRHQDVPSQDDSKPTQR HQDVPSQDDSKPTQRQFTILNFNDLMSSAV R H Q Q R Q 0 1 0 3 0 3 0 0 1 0 0 1 0 0 2 2 1 0 0 1 0 0 15 1 1736.8078 Q9NRN7 Q9NRN7 253 267 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 3 0.0002375 138.91 By MS/MS 7.5 0.5 1 1 2 3148300 3148300 0 6089 2608 6304 15055;15056 10731;10732 10731 2 112410 0 HQEEESETEEDEEDTPGHK YCKASGSKKHRRGHRHQEEESETEEDEEDT ESETEEDEEDTPGHKSGYRHSSWSEGEEHG R H Q H K S 0 0 0 2 0 1 8 1 2 0 0 1 0 0 1 1 2 0 0 0 0 0 19 0 2253.8782 CON__Q5D862;Q5D862 CON__Q5D862 108 126 FLG2 Filaggrin-2 yes no 3 0.0083544 73.138 By MS/MS 6.5 1.12 1 1 1 1 4 86268 0 86268 + 6090 60 6305 15057;15058;15059;15060 10733 10733 1 0 438250 HQEGEIFDTEK LTDAYFKKKKLRKPRHQEGEIFDTEKEKYE RKPRHQEGEIFDTEKEKYEITEQRKIDQKA R H Q E K E 0 0 0 1 0 1 3 1 1 1 0 1 0 1 0 0 1 0 0 0 0 0 11 0 1331.5994 Q02878 Q02878 227 237 RPL6 60S ribosomal protein L6 yes yes 2 0.0023088 119.03 By MS/MS By matching 8 0 2 1 1 812240 775470 36769 6091 1257 6306 15061;15062 10734 10734 1 51157 313690 HQEHILR ERLERQHWTMTKIQKHQEHILRFASWALES WTMTKIQKHQEHILRFASWALESDNNTALL K H Q L R F 0 1 0 0 0 1 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 931.4988 Q13263 Q13263 341 347 TRIM28 Transcription intermediary factor 1-beta yes yes 3 0.012032 120.46 By MS/MS 5.5 1.12 1 1 1 1 4 7327100 7327100 0 6092 1351 6307 15063;15064;15065;15066 10735 10735 1 192640 0 HQGLPQEVLNENLLR ______________________________ HQGLPQEVLNENLLRFFVAPFPEVFGKEKV K H Q L R F 0 1 2 0 0 2 2 1 1 0 4 0 0 0 1 0 0 0 0 1 0 0 15 0 1758.9377 CON__P02662 CON__P02662 8 22 yes yes 3 0.0039966 98.676 By MS/MS 5.5 0.5 1 1 2 1623300 1623300 0 + 6093 37 6308 15067;15068 10736 10736 1 39246 0 HQKPAGAPATK AATVSASTSNIIPPRHQKPAGAPATKKKQQ IPPRHQKPAGAPATKKKQQQKKKKGGKGGW R H Q T K K 3 0 0 0 0 1 0 1 1 0 0 2 0 0 2 0 1 0 0 0 0 0 11 1 1104.604 O76094 O76094 646 656 SRP72 Signal recognition particle subunit SRP72 yes yes 2;3 0.0012563 156.16 By MS/MS 5.75 0.829 2 1 1 4 2058000 2058000 0 6094 346 6309 15069;15070;15071;15072 10737;10738;10739 10737 2 77153 0 HQLQEASR SQKDLENLKAEVARRHQLQEASRNRDRAEE KAEVARRHQLQEASRNRDRAEEPMATEPAP R H Q S R N 1 1 0 0 0 2 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 8 0 967.48354 O75153 O75153 1264 1271 CLUH Clustered mitochondria protein homolog yes yes 2 0.022124 104.01 By MS/MS By matching 2.5 0.5 1 1 1 1 174090 157150 16941 6095 285 6310 15073;15074 10740 10740 1 4102.4 14263 HQNVQLPR GHKLHGKPIRITLSKHQNVQLPREGQEDQG IRITLSKHQNVQLPREGQEDQGLTKDYGNS K H Q P R E 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 990.53591 P26599 P26599 411 418 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 2 0.0039335 143 By MS/MS 6 0 1 1 2967000 2967000 0 6096 697 6311 15075 10741 10741 1 23136 0 HQSHLQAK SLMHDVYGMLLNLEKHQSHLQAKSLLPEKT MLLNLEKHQSHLQAKSLLPEKTVTRDVIGS K H Q A K S 1 0 0 0 0 2 0 0 2 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 947.49371 P82933 P82933 175 182 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2;3 0.00042363 185.55 By MS/MS By matching 7.25 0.433 3 1 3 1 5576700 5569600 7103.6 6097 1211 6312 15076;15077;15078;15079 10742;10743;10744 10742 3 106160 29162 HRAQVIYTR LQELLSKGLIKLVSKHRAQVIYTRNTKGGD IKLVSKHRAQVIYTRNTKGGDAPAAGEDA_ K H R T R N 1 2 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 1 0 0 9 1 1142.6309 P62851 P62851 103 111 RPS25 40S ribosomal protein S25 yes yes 3 0.0080748 94.309 By MS/MS 10 0 1 1 109270 109270 0 6098 1150 6313 15080 10745 10745 1 116140 0 HREEIGNR VQFEEPEMANQALLKHREEIGNRYIEIFPS ANQALLKHREEIGNRYIEIFPSRRNEVRTH K H R N R Y 0 2 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 8 1 1009.5053 Q12849 Q12849 310 317 GRSF1 G-rich sequence factor 1 yes yes 2;3 0.0018573 139.97 By MS/MS 6 0 2 2 0 0 0 6099 1310 6314 15081;15082 10746;10747 10746 2 0 0 HRELFLSR SKQPGVSEQQRHQLKHRELFLSRQFESLPA QQRHQLKHRELFLSRQFESLPATHIRGKCS K H R S R Q 0 2 0 0 0 0 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 0 8 1 1056.5829 Q13330;Q9BTC8;O94776 O94776 85 92 MTA1;MTA3;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3;Metastasis-associated protein MTA2 no no 3 0.038494 82.645 By MS/MS 5 0 1 1 603600 603600 0 6100 349;1357 6315 15083 10748 10748 1 24810 0 HRELYLR MENQVLTPHVYWAQRHRELYLRVELSDVQN PHVYWAQRHRELYLRVELSDVQNPAISITE R H R L R V 0 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 7 1 985.54575 Q9P035 Q9P035 16 22 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 3 0.027097 98.523 By MS/MS 1 0 1 1 1014800 1014800 0 6101 2723 6316 15084 10749 10749 1 49582 0 HRPELIDYGK ISWKDGLGFCALIHRHRPELIDYGKLRKDD ALIHRHRPELIDYGKLRKDDPLTNLNTAFD R H R G K L 0 1 0 1 0 0 1 1 1 1 1 1 0 0 1 0 0 0 1 0 0 0 10 1 1226.6408 P12814 P12814 186 195 ACTN1 Alpha-actinin-1 yes yes 3 0.0043198 114.89 By MS/MS 4 0 1 1 647940 647940 0 6102 568 6317 15085 10750 10750 1 17688 0 HRPQLLVER TPEQIEEAVEAAINRHRPQLLVERYHFNMG EAAINRHRPQLLVERYHFNMGLLMGEARAV R H R E R Y 0 2 0 0 0 1 1 0 1 0 2 0 0 0 1 0 0 0 0 1 0 0 9 1 1146.6622 P47897 P47897 133 141 QARS Glutamine--tRNA ligase yes yes 3 0.00028884 191.45 By MS/MS 5 0.816 1 1 1 3 4509100 4509100 0 6103 896 6318 15086;15087;15088 10751;10752 10751 2 124020 0 HRPSEADEEELAR RPRAVFHEEEQRRPKHRPSEADEEELARRR PKHRPSEADEEELARRREARKQEQANNPFY K H R A R R 2 2 0 1 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 13 1 1537.7121 O14617 O14617 655 667 AP3D1 AP-3 complex subunit delta-1 yes yes 3 0.00049993 130.19 By MS/MS 2.67 1.25 1 1 1 3 1292800 1292800 0 6104 117 6319 15089;15090;15091 10753;10754 10753 2 46068 0 HSCDALNR VPVPNMTPSGVGRERHSCDALNRWLGEQLK SGVGRERHSCDALNRWLGEQLKQLVPASGL R H S N R W 1 1 1 1 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 8 0 971.42431 Q6P996 Q6P996 423 430 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 0.021557 104.75 By MS/MS 4.5 0.5 1 1 2 738330 738330 0 6105 1712 6320 15092;15093 10755 10755 1 23415 0 HSDFFNVK DSTDFNDKILNEPLKHSDFFNVKELFSVRS ILNEPLKHSDFFNVKELFSVRSLFDARVHL K H S V K E 0 0 1 1 0 0 0 0 1 0 0 1 0 2 0 1 0 0 0 1 0 0 8 0 992.47158 Q9Y399 Q9Y399 69 76 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.050559 95.815 By MS/MS 8 0 1 1 0 0 0 6106 2920 6321 15094 10756 10756 1 0 0 HSEAATAQR SKNEEDEGHSNSSPRHSEAATAQREEWKMF SNSSPRHSEAATAQREEWKMFIGGLSWDTT R H S Q R E 3 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 9 0 969.46281 Q14103 Q14103 86 94 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 0.0012339 138.06 By MS/MS By matching 7 0 2 1 1 816010 809330 6673.7 6107 1406 6322 15095;15096 10757 10757 1 14463 27397 HSEAATAQREEWK SKNEEDEGHSNSSPRHSEAATAQREEWKMF PRHSEAATAQREEWKMFIGGLSWDTTKKDL R H S W K M 3 1 0 0 0 1 3 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 13 1 1541.7223 Q14103 Q14103 86 98 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2;3 8.8244E-17 221.6 By MS/MS 7 0 2 2 8516000 8516000 0 6108 1406 6323 15097;15098 10758;10759 10759 2 152180 0 HSELLQK EPKTRAGGFASALERHSELLQKVEPLQKGS GFASALERHSELLQKVEPLQKGSPKNVESF R H S Q K V 0 0 0 0 0 1 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 853.46577 Q9Y2Q9 Q9Y2Q9 59 65 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.0077484 163.34 By MS/MS 9 0.816 1 1 1 3 5638200 5638200 0 6109 2896 6324 15099;15100;15101 10760;10761 10760 2 3664700 0 HSELLQKVEPLQK EPKTRAGGFASALERHSELLQKVEPLQKGS ERHSELLQKVEPLQKGSPKNVESFASMLRH R H S Q K G 0 0 0 0 0 2 2 0 1 0 3 2 0 0 1 1 0 0 0 1 0 0 13 1 1547.8671 Q9Y2Q9 Q9Y2Q9 59 71 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 3 0.0057168 92.906 By MS/MS 9.5 0.5 1 1 2 3705600 3705600 0 6110 2896 6325 15102;15103 10762;10763 10762 2 2252300 0 HSELSELNVK MGPMIDEKLEEIDRKHSELSELNVKVLEAL EIDRKHSELSELNVKVLEALELYNKLVNEA K H S V K V 0 0 1 0 0 0 2 0 1 0 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1154.5932 O75886;Q92783 O75886 344 353 STAM2;STAM Signal transducing adapter molecule 2;Signal transducing adapter molecule 1 yes no 2 0.039019 81.525 By MS/MS 4.5 0.5 1 1 2 931220 931220 0 6111 335 6326 15104;15105 10764 10764 1 34687 0 HSEVQQANLK PAMSMDANGKIIWAKHSEVQQANLKAMGDA IIWAKHSEVQQANLKAMGDAEIKDGERLPL K H S L K A 1 0 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1152.5887 P35606 P35606 319 328 COPB2 Coatomer subunit beta yes yes 2 7.2056E-12 213.85 By MS/MS 2.5 1.12 1 1 1 1 4 8792700 8792700 0 6112 795 6327 15106;15107;15108;15109 10765;10766;10767;10768 10765 4 395230 0 HSFSGSQQK DELAMSSSSDFQQDRHSFSGSQQKWKDFEL DFQQDRHSFSGSQQKWKDFELPGDTLYYRF R H S Q K W 0 0 0 0 0 2 0 1 1 0 0 1 0 1 0 3 0 0 0 0 0 0 9 0 1004.4676 O43149 O43149 2756 2764 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.056797 80.219 By MS/MS 1 0 1 1 121300 121300 0 6113 182 6328 15110 10769 10769 1 5926.4 0 HSGASAEVQK KKAYRKRALMHHPDRHSGASAEVQKEEEKK HHPDRHSGASAEVQKEEEKKFKEVGEAFTI R H S Q K E 2 0 0 0 0 1 1 1 1 0 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1012.4938 Q99615 Q99615 413 422 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.018445 112.11 By MS/MS 6 0 1 1 2274500 2274500 0 6114 2276 6329 15111 10770 10770 1 17737 0 HSGASAEVQKEEEK KKAYRKRALMHHPDRHSGASAEVQKEEEKK RHSGASAEVQKEEEKKFKEVGEAFTILSDP R H S E K K 2 0 0 0 0 1 4 1 1 0 0 2 0 0 0 2 0 0 0 1 0 0 14 1 1527.7165 Q99615 Q99615 413 426 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2;3 9.2292E-73 324.11 By MS/MS 6 0 2 2 5642900 5642900 0 6115 2276 6330 15112;15113 10771;10772 10772 2 44003 0 HSGASAEVQKEEEKK KKAYRKRALMHHPDRHSGASAEVQKEEEKK HSGASAEVQKEEEKKFKEVGEAFTILSDPK R H S K K F 2 0 0 0 0 1 4 1 1 0 0 3 0 0 0 2 0 0 0 1 0 0 15 2 1655.8115 Q99615 Q99615 413 427 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 0.033997 84.297 By MS/MS 6 0 1 1 2024900 2024900 0 6116 2276 6331 15114 10773 10773 0 15790 0 HSGEATNTVTK HNLDAFVRLIALLVKHSGEATNTVTKINLL LLVKHSGEATNTVTKINLLNKVLGIVVGVL K H S T K I 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 1 3 0 0 1 0 0 11 0 1143.552 A5YKK6 A5YKK6 1949 1959 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.001395 140.78 By MS/MS 2.5 0.5 1 1 2 301420 301420 0 6117 19 6332 15115;15116 10774 10774 1 14222 0 HSLASSEYPVR SDPKLAVLITNSNVRHSLASSEYPVRRRQC SNVRHSLASSEYPVRRRQCEEVARALGKES R H S V R R 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 3 0 0 1 1 0 0 11 0 1244.6149 P51570 P51570 229 239 GALK1 Galactokinase yes yes 2 0.00015368 156.83 By MS/MS 7 0 1 1 3149500 3149500 0 6118 967 6333 15117 10775 10775 1 56282 0 HSLLQTLYKV VTKPNSALESCSFARHSLLQTLYKV_____ CSFARHSLLQTLYKV_______________ R H S K V - 0 0 0 0 0 1 0 0 1 0 3 1 0 0 0 1 1 0 1 1 0 0 10 1 1200.6867 P46060 P46060 578 587 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0036319 144.65 By MS/MS 6 0 1 1 1558600 1558600 0 6119 876 6334 15118 10776 10776 1 12154 0 HSLNSSSASTTEPDFQK EVPFDVPELWYEDEKHSLNSSSASTTEPDF LNSSSASTTEPDFQKDILIACRLNQKKGAY K H S Q K D 1 0 1 1 0 1 1 0 1 0 1 1 0 1 1 5 2 0 0 0 0 0 17 0 1834.8333 P42704 P42704 1021 1037 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 2.5274E-25 272.72 By MS/MS 3.33 0.471 2 1 3 2613900 2613900 0 6120 854 6335 15119;15120;15121 10777;10778 10778 2 68444 0 HSLNSSSASTTEPDFQKDILIACR EVPFDVPELWYEDEKHSLNSSSASTTEPDF TTEPDFQKDILIACRLNQKKGAYDIFLNAK K H S C R L 2 1 1 2 1 1 1 0 1 2 2 1 0 1 1 5 2 0 0 0 0 0 24 1 2676.2813 P42704 P42704 1021 1044 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.035298 42.746 By MS/MS 3 0 1 1 646960 646960 0 6121 854 6336 15122 10779 10779 1 16889 0 HSLPNSR SMGSLLLAAGTPGMRHSLPNSRIMIHQPSG AAGTPGMRHSLPNSRIMIHQPSGGARGQAT R H S S R I 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 2 0 0 0 0 0 0 7 0 809.4144 Q16740 Q16740 168 174 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 2 0.045203 104.45 By MS/MS By matching 8.33 0.471 2 1 2 1 5261500 5243900 17581 6122 1545 6337 15123;15124;15125 10780 10780 1 442770 149990 HSLSLLDLEQK IKQAVQKVLGSVSLKHSLSLLDLEQKLKEI VSLKHSLSLLDLEQKLKEIRNLVEQHKSSS K H S Q K L 0 0 0 1 0 1 1 0 1 0 4 1 0 0 0 2 0 0 0 0 0 0 11 0 1281.6929 P56589 P56589 198 208 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 9.5056E-07 178.84 By MS/MS 7.5 0.5 1 1 2 2284100 2284100 0 6123 1049 6338 15126;15127 10781;10782 10781 2 67434 0 HSMDQTGSK KNESELEAHLCRMMKHSMDQTGSKSDKETE LCRMMKHSMDQTGSKSDKETEKGASRIDEK K H S S K S 0 0 0 1 0 1 0 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 9 0 989.42364 Q14008 Q14008 1800 1808 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0017156 132.88 By MS/MS 2 0 1 1 127160 127160 0 6124 1405 6339 15128 10783 10783 1 6320.6 0 HSPDTAEGQLKEDR ELERILAPYTDFHYRHSPDTAEGQLKEDRE RHSPDTAEGQLKEDREARFLASKMGIIATF R H S D R E 1 1 0 2 0 1 2 1 1 0 1 1 0 0 1 1 1 0 0 0 0 0 14 1 1581.7383 Q6R327 Q6R327 264 277 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.00040426 125.61 By MS/MS 2.5 0.5 1 1 2 483020 483020 0 6125 1722 6340 15129;15130 10784 10784 1 20039 0 HSPLTQMGPAK KGSPKNVESFASMLRHSPLTQMGPAKDKLV SMLRHSPLTQMGPAKDKLVIGRIFHIVEND R H S A K D 1 0 0 0 0 1 0 1 1 0 1 1 1 0 2 1 1 0 0 0 0 0 11 0 1165.5914 Q9Y2Q9 Q9Y2Q9 86 96 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.010408 93.667 By MS/MS 9.5 0.5 1 1 2 420060 420060 0 6126 2896 6341 15131;15132 10785 10785 1668 1 275340 0 HSQELPAILDDTTLSGSDR LKEDTLQFLIKVVSRHSQELPAILDDTTLS LPAILDDTTLSGSDRNAHLNALKMNCYALI R H S D R N 1 1 0 3 0 1 1 1 1 1 3 0 0 0 1 3 2 0 0 0 0 0 19 0 2053.9916 Q15021 Q15021 92 110 NCAPD2 Condensin complex subunit 1 yes yes 3 0.024894 60.938 By MS/MS 3.5 0.5 1 1 2 889060 889060 0 6127 1464 6342 15133;15134 10786 10786 1 23416 0 HSQYHVDGSLEK DHYKAKATRHIFLIRHSQYHVDGSLEKDRT LIRHSQYHVDGSLEKDRTLTPLGREQAELT R H S E K D 0 0 0 1 0 1 1 1 2 0 1 1 0 0 0 2 0 0 1 1 0 0 12 0 1398.6528 Q96HS1 Q96HS1 105 116 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 5.1659E-11 216.91 By MS/MS 8.75 0.829 2 1 1 4 18941000 18941000 0 6128 2196 6343 15135;15136;15137;15138 10787;10788;10789 10788 3 2002400 0 HSQYHVDGSLEKDR DHYKAKATRHIFLIRHSQYHVDGSLEKDRT RHSQYHVDGSLEKDRTLTPLGREQAELTGL R H S D R T 0 1 0 2 0 1 1 1 2 0 1 1 0 0 0 2 0 0 1 1 0 0 14 1 1669.7808 Q96HS1 Q96HS1 105 118 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3;4 6.4633E-05 165.78 By MS/MS By matching 8.33 0.471 4 2 5 1 14540000 14520000 19514 6129 2196 6344 15139;15140;15141;15142;15143;15144 10790;10791;10792;10793 10791 4 1127300 166480 HSSLITPLQAVAQR YRSYRHGDLPDIQIKHSSLITPLQAVAQRD KHSSLITPLQAVAQRDPIIAKQLFSSLFSG K H S Q R D 2 1 0 0 0 2 0 0 1 1 2 0 0 0 1 2 1 0 0 1 0 0 14 0 1519.8471 P78527 P78527 2787 2800 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0079146 87.498 By MS/MS 1.5 0.5 1 1 2 354920 354920 0 6130 1197 6345 15145;15146 10794 10794 1 17407 0 HSVATAADLELK LEAVLHLVIASSDTRHSVATAADLELKSKQ DTRHSVATAADLELKSKQSLIDWNNPAIIN R H S L K S 3 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 1 0 0 1 0 0 12 0 1253.6616 Q5VYK3 Q5VYK3 274 285 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00056763 138.25 By MS/MS 3.5 0.5 1 1 2 2261800 2261800 0 6131 1657 6346 15147;15148 10795 10795 1 59155 0 HTATGDTIVSSK PSLTAGNIALTVGLKHTATGDTIVSSKSSA GLKHTATGDTIVSSKSSALAAARRAEREGE K H T S K S 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 2 3 0 0 1 0 0 12 0 1215.6095 Q969S9 Q969S9 440 451 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.002063 150.15 By MS/MS 5.5 0.5 1 1 2 2991800 2991800 0 6132 2107 6347 15149;15150 10796 10796 1 51329 0 HTDPVPDPR VDQSILTGESVSVIKHTDPVPDPRAVNQDK SVSVIKHTDPVPDPRAVNQDKKNMLFSGTN K H T P R A 0 1 0 2 0 0 0 0 1 0 0 0 0 0 3 0 1 0 0 1 0 0 9 0 1032.4989 P16615 P16615 190 198 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.036903 87.181 By MS/MS 3 1.41 1 1 1 1 1 5 8588800 8588800 0 6133 608 6348 15151;15152;15153;15154;15155 10797 10797 1 345250 0 HTENEEDKVSSSSFR EELALYQIQLLKDLRHTENEEDKVSSSSFR HTENEEDKVSSSSFRQRMLGNLLRPPYERP R H T F R Q 0 1 1 1 0 0 3 0 1 0 0 1 0 1 0 4 1 0 0 1 0 0 15 1 1750.7758 Q13057 Q13057 323 337 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 3 0.0063287 86.738 By MS/MS 5.5 0.5 1 1 2 2133900 2133900 0 6134 1330 6349 15156;15157 10798 10798 1 21278 0 HTFEEAEK TQREPKEMQKPQWYRHTFEEAEKGFDETLA QKPQWYRHTFEEAEKGFDETLAKEKGMNRD R H T E K G 1 0 0 0 0 0 3 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 8 0 989.44543 P42345 P42345 236 243 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.052476 90.37 By MS/MS 2 0 1 1 439840 439840 0 6135 849 6350 15158 10799 10799 1 21862 0 HTFSGVASVESSSGEAFHVGK VAVPLPLHRAHYDLRHTFSGVASVESSSGE ASVESSSGEAFHVGKTPIVGQPSIPGGPVR R H T G K T 2 0 0 0 0 0 2 3 2 0 0 1 0 2 0 5 1 0 0 3 0 0 21 0 2118.997 CON__P12763 CON__P12763 313 333 yes yes 3 0.00024675 104.45 By MS/MS 6 0 1 1 3774400 3774400 0 + 6136 48 6351 15159 10800 10800 1 29433 0 HTGPNSPDTANDGFVR EVFKSNNVEMDWVLKHTGPNSPDTANDGFV TGPNSPDTANDGFVRLRGLPFGCSKEEIVQ K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 P31943;P55795 P31943 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 2;3 1.0585E-21 231.52 By MS/MS 6 0 2 2 18611000 18611000 0 6137 758;1037 6352 15160;15161 10801;10802 10802 2 145130 0 HTGQIGGLK GCGTLVDLCQGPHLRHTGQIGGLKLLSNSS QGPHLRHTGQIGGLKLLSNSSSLWRSSGAP R H T L K L 0 0 0 0 0 1 0 3 1 1 1 1 0 0 0 0 1 0 0 0 0 0 9 0 909.50321 Q9BW92 Q9BW92 247 255 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0018417 149.57 By MS/MS By matching 5.33 0.471 2 1 2 1 9968200 9930400 37800 6138 2391 6353 15162;15163;15164 10803;10804 10803 2 279250 111850 HTLEQHNWNIEAAVQDR QFQDLTGIESMDQCRHTLEQHNWNIEAAVQ LEQHNWNIEAAVQDRLNEQEGVPSVFNPPP R H T D R L 2 1 2 1 0 2 2 0 2 1 1 0 0 0 0 0 1 1 0 1 0 0 17 0 2059.9824 Q96CS3 Q96CS3 34 50 FAF2 FAS-associated factor 2 yes yes 2;3 9.5177E-44 266.07 By MS/MS 6 0 2 2 44266000 44266000 0 6139 2140 6354 15165;15166 10805;10806 10806 2 345190 0 HTLNQIDSVK AAVDYINKHLPRGYKHTLNQIDSVKVWPRR PRGYKHTLNQIDSVKVWPRRPTGEVYDIEI K H T V K V 0 0 1 1 0 1 0 0 1 1 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1153.6091 CON__P12763 CON__P12763 58 67 yes yes 2 9.0007E-06 175.93 By MS/MS By matching 6.83 1.34 1 2 1 1 1 5 1 21634000 21551000 82794 + 6140 48 6355 15167;15168;15169;15170;15171;15172 10807;10808;10809;10810 10808 4 441630 253920 HTLTQIK NNPRSVTLLIKGPNKHTLTQIKDAVRDGLR LLIKGPNKHTLTQIKDAVRDGLRAVKNAID K H T I K D 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 2 0 0 0 0 0 7 0 839.4865 P40227 P40227 382 388 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.022095 120.62 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 102650000 102650000 0 6141 828 6356 15173;15174;15175;15176;15177;15178;15179;15180;15181;15182 10811 10811 1 1571600 0 HTSALCNSCR CTQAQVLSAATIVAKHTSALCNSCRLASAR TIVAKHTSALCNSCRLASARTTNPTAKRQF K H T C R L 1 1 1 0 2 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1204.5077 Q9Y490 Q9Y490 1501 1510 TLN1 Talin-1 yes yes 2;3 0.00036905 172.98 By MS/MS 2 0 2 2 612010 612010 0 6142 2947 6357 15183;15184 10812;10813 10812 2 30420 0 HTVDDGLDIR VRKELIREVEMGPFKHTVDDGLDIRKAAFE MGPFKHTVDDGLDIRKAAFECMYTLLDSCL K H T I R K 0 1 0 3 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1139.5571 Q86VP6 Q86VP6 1073 1082 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.051374 90.657 By MS/MS 3.5 0.5 1 1 2 1362300 1362300 0 6143 1829 6358 15185;15186 10814 10814 1 36511 0 HTVVVYCDR IPLLFETKKLLKYMKHTVVVYCDRDTQLAR LLKYMKHTVVVYCDRDTQLARLMRRNSLNR K H T D R D 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 3 0 0 9 0 1147.5444 Q8WVC6 Q8WVC6 129 137 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.002198 127.68 By MS/MS 8.5 0.5 1 1 2 1534100 1534100 0 6144 2028 6359 15187;15188 10815 10815 1 804270 0 HVAAIGPR SMSLNIGGAKGSMNRHVAAIGPRFKLLTLG AKGSMNRHVAAIGPRFKLLTLGLSLLHADV R H V P R F 2 1 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 1 0 0 8 0 819.47152 P42356;A4QPH2;Q8N8J0 P42356 1342 1349 PI4KA;PI4KAP2;PI4KAP1 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2;Putative inactive phosphatidylinositol 4-kinase alpha-like protein P1 yes no 2 0.053665 89.903 By MS/MS 2.5 0.5 1 1 2 460120 460120 0 6145 850 6360 15189;15190 10816 10816 1 20044 0 HVAEDLGKVFGER GAATLVDEVGVDVAKHVAEDLGKVFGERFG AKHVAEDLGKVFGERFGGGNPELLTQMVSK K H V E R F 1 1 0 1 0 0 2 2 1 0 1 1 0 1 0 0 0 0 0 2 0 0 13 1 1455.747 P40939 P40939 598 610 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.0030773 99.669 By MS/MS 5 0 1 1 8941200 8941200 0 6146 835 6361 15191 10817 10817 1 367520 0 HVAPDSIR LWRTLMGPTRVFRARHVAPDSIRGSFGLTD TRVFRARHVAPDSIRGSFGLTDTRNTTHGS R H V I R G 1 1 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 8 0 893.47191 O75414 O75414 109 116 NME6 Nucleoside diphosphate kinase 6 yes yes 2 0.018258 109.01 By MS/MS 9 0 1 1 954460 954460 0 6147 306 6362 15192 10818 10818 1 547770 0 HVDTGMGLER HNREADGSLQPLPQRHVDTGMGLERLVAVL PLPQRHVDTGMGLERLVAVLQGKHSTYDTD R H V E R L 0 1 0 1 0 0 1 2 1 0 1 0 1 0 0 0 1 0 0 1 0 0 10 0 1113.5237 Q5JTZ9 Q5JTZ9 263 272 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.0041409 104.01 By MS/MS 4 0 1 1 867040 867040 0 6148 1611 6363 15193 10819 10819 1194 1 23669 0 HVDYVADQIVTK QISFVNSIATSKGGRHVDYVADQIVTKLVD GGRHVDYVADQIVTKLVDVVKKKNKGGVAV R H V T K L 1 0 0 2 0 1 0 0 1 1 0 1 0 0 0 0 1 0 1 3 0 0 12 0 1386.7143 P11388 P11388 325 336 TOP2A DNA topoisomerase 2-alpha yes yes 2 5.6556E-07 178.81 By MS/MS 3 0 1 1 1067200 1067200 0 6149 553 6364 15194 10820 10820 1 27858 0 HVEEFSPR CIVGDPSTAKSQFLKHVEEFSPRAVYTSGK AKSQFLKHVEEFSPRAVYTSGKASSAAGLT K H V P R A 0 1 0 0 0 0 2 0 1 0 0 0 0 1 1 1 0 0 0 1 0 0 8 0 999.47739 Q14566 Q14566 408 415 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.042942 94.114 By MS/MS 4 0.816 1 1 1 3 6309300 6309300 0 6150 1436 6365 15195;15196;15197 10821 10821 1 179390 0 HVENDGYK FDVFPDGWDKRYCLRHVENDGYKTIYFFGD DKRYCLRHVENDGYKTIYFFGDKTMPGGND R H V Y K T 0 0 1 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 1 1 0 0 8 0 960.43011 O15305 O15305 195 202 PMM2 Phosphomannomutase 2 yes yes 2 0.022336 103.74 By MS/MS 8 0 1 1 161320 161320 0 6151 168 6366 15198 10822 10822 1 10642 0 HVENYLK KLNSIGNYYKPWFFKHVENYLKTNREGLEY YYKPWFFKHVENYLKTNREGLEYIPLRHYY K H V L K T 0 0 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 1 1 0 0 7 0 901.46577 Q15392 Q15392 307 313 DHCR24 Delta(24)-sterol reductase yes yes 2 0.0019877 155.51 By MS/MS 2 0.816 1 1 1 3 1409400 1409400 0 6152 1497 6367 15199;15200;15201 10823;10824 10823 2 48791 0 HVESVDKR ______________________________ PLWRCNRHVESVDKRHCSLQAVPEEIYRYS R H V K R H 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 8 1 968.50394 Q14160 Q14160 13 20 SCRIB Protein scribble homolog yes yes 3 0.0049147 127.46 By MS/MS 2 0 1 1 0 0 0 6153 1412 6368 15202 10825 10825 1 0 0 HVFTTFYAK STVFHQNDVKIPDAKHVFTTFYAKTKSLLV KIPDAKHVFTTFYAKTKSLLVNPVLFPNRE K H V A K T 1 0 0 0 0 0 0 0 1 0 0 1 0 2 0 0 2 0 1 1 0 0 9 0 1112.5655 Q9BUB7 Q9BUB7 207 215 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2 0.010447 103.83 By MS/MS 9 0.816 1 1 1 3 3361200 3361200 0 6154 2361 6369 15203;15204;15205 10826 10826 1 2200100 0 HVLCAYCYEK NNIDVCPECGHLKQKHVLCAYCYEKVCKET HLKQKHVLCAYCYEKVCKETAEIRRQIGKQ K H V E K V 1 0 0 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 2 1 0 0 10 0 1341.5846 Q9BYC8 Q9BYC8 120 129 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 2 0.00092341 126.41 By MS/MS 10 0 1 1 263840 263840 0 6155 2410 6370 15206 10827 10827 1 280430 0 HVLDNSGEWSVTK INAQLPLTDKARMARHVLDNSGEWSVTKRQ ARHVLDNSGEWSVTKRQVILLHTELERSLE R H V T K R 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 2 1 1 0 2 0 0 13 0 1470.7103 Q8WVC6 Q8WVC6 174 186 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.00019538 149.41 By MS/MS 9 0 1 1 396680 396680 0 6156 2028 6371 15207 10828 10828 1 227660 0 HVLEGHDR ITGVDLFGTTDAVVKHVLEGHDRGVNWAAF TTDAVVKHVLEGHDRGVNWAAFHPTMPLIV K H V D R G 0 1 0 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 961.47298 P53621 P53621 199 206 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.012155 116.9 By MS/MS 2.6 1.02 1 1 2 1 5 2839300 2839300 0 6157 1005 6372 15208;15209;15210;15211;15212 10829;10830 10829 2 89845 0 HVLTGSADNSCR HTGAVWCVDADWDTKHVLTGSADNSCRLWD DTKHVLTGSADNSCRLWDCETGKQLALLKT K H V C R L 1 1 1 1 1 0 0 1 1 0 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1315.5939 Q13347 Q13347 66 77 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3 1.0321E-11 212.28 By MS/MS By matching 8.14 1.25 3 2 2 6 1 7622000 7608400 13596 6158 1358 6373 15213;15214;15215;15216;15217;15218;15219 10831;10832;10833;10834;10835;10836 10833 6 485090 55815 HVLVTLGEK FDKEGNGTVMGAEIRHVLVTLGEKMTEEEV MGAEIRHVLVTLGEKMTEEEVEMLVAGHED R H V E K M 0 0 0 0 0 0 1 1 1 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 994.58113 P60660 P60660 111 119 MYL6 Myosin light polypeptide 6 yes yes 2 0.033057 89.355 By MS/MS By matching 10 0 2 1 1 894740 854300 40446 6159 1071 6374 15220;15221 10837 10837 1 908030 1037400 HVNEDSQEK PRIRRSGLELYAEWKHVNEDSQEKKILLSP LYAEWKHVNEDSQEKKILLSPERVHEIFKR K H V E K K 0 0 1 1 0 1 2 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 9 0 1084.4785 P24928 P24928 204 212 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.010507 103.7 By MS/MS 2 0 1 1 64793 64793 0 6160 681 6375 15222 10838 10838 1 3220.6 0 HVNEDSQEKK PRIRRSGLELYAEWKHVNEDSQEKKILLSP YAEWKHVNEDSQEKKILLSPERVHEIFKRI K H V K K I 0 0 1 1 0 1 2 0 1 0 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1212.5735 P24928 P24928 204 213 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2;3 0.010453 114.97 By MS/MS 2 0 2 2 89618 89618 0 6161 681 6376 15223;15224 10839;10840 10839 2 4454.5 0 HVSAQLER AQFEKLTRALEEERRHVSAQLERVRVSPQD ALEEERRHVSAQLERVRVSPQDANPLMANG R H V E R V 1 1 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 938.49338 O60716 O60716 36 43 CTNND1 Catenin delta-1 yes yes 2 0.031567 98.582 By MS/MS By matching 4.33 0.471 2 1 2 1 2356500 2337900 18536 6162 260 6377 15225;15226;15227 10841 10841 1 69235 38733 HVSPLIGR TGAVATALGLNALTKHVSPLIGRFVPFAAV GLNALTKHVSPLIGRFVPFAAVAAANCINI K H V G R F 0 1 0 0 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 1 0 0 8 0 877.51339 Q9H9B4 Q9H9B4 171 178 SFXN1 Sideroflexin-1 yes yes 2 0.035732 101.33 By MS/MS 8 0 1 1 0 0 0 6163 2533 6378 15228 10842 10842 1 0 0 HVVAVVLGDVGR LLGGWKRWRRGRAARHVVAVVLGDVGRSPR AARHVVAVVLGDVGRSPRMQYHALSLAMHG R H V G R S 1 1 0 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 5 0 0 12 0 1219.7037 Q9BT22 Q9BT22 34 45 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 0.0026731 117.7 By MS/MS 7 0 1 1 1586600 1586600 0 6164 2344 6379 15229 10843 10843 1 28353 0 HVVFIAQR QVRLVRELEKKFSGKHVVFIAQRRILPKPT EKKFSGKHVVFIAQRRILPKPTRKSRTKNK K H V Q R R 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 8 0 968.55558 P62081 P62081 91 98 RPS7 40S ribosomal protein S7 yes yes 2 0.029525 99.384 By MS/MS 9 0 1 1 4522200 4522200 0 6165 1113 6380 15230 10844 10844 1 2595300 0 HVVLGAIENK ADELRRHLELKEKGRHVVLGAIENKVESKG KEKGRHVVLGAIENKVESKGNSPPSSGEAC R H V N K V 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1078.6135 P41227 P41227 170 179 NAA10 N-alpha-acetyltransferase 10 yes yes 2 0.00092707 126.24 By MS/MS 8.5 0.5 1 1 2 2646200 2646200 0 6166 838 6381 15231;15232 10845;10846 10845 2 637730 0 HVVLGAIENKVESK ADELRRHLELKEKGRHVVLGAIENKVESKG RHVVLGAIENKVESKGNSPPSSGEACREEK R H V S K G 1 0 1 0 0 0 2 1 1 1 1 2 0 0 0 1 0 0 0 3 0 0 14 1 1521.8515 P41227 P41227 170 183 NAA10 N-alpha-acetyltransferase 10 yes yes 3 0.041001 60.55 By MS/MS 8.5 0.5 1 1 2 1064400 1064400 0 6167 838 6382 15233;15234 10847 10847 1 229510 0 HVVQSISTQQEK MRRKEQEHMINWVEKHVVQSISTQQEKETI VEKHVVQSISTQQEKETIAKCIADLKLLAK K H V E K E 0 0 0 0 0 3 1 0 1 1 0 1 0 0 0 2 1 0 0 2 0 0 12 0 1382.7154 P24539 P24539 222 233 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 5.3456E-83 332.56 By MS/MS By MS/MS 9 0 2 1 1 9383500 9313400 70111 6168 678 6383 15235;15236 10848;10849 10849 2 5345000 755600 HVVQSISTQQEKETIAK MRRKEQEHMINWVEKHVVQSISTQQEKETI VQSISTQQEKETIAKCIADLKLLAKKAQAQ K H V A K C 1 0 0 0 0 3 2 0 1 2 0 2 0 0 0 2 2 0 0 2 0 0 17 1 1925.0218 P24539 P24539 222 238 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 3 2.1847E-07 152.68 By MS/MS 9 0 1 1 1669700 1669700 0 6169 678 6384 15237 10850 10850 1 958230 0 HVYEIAR ARQTGKEVAGLVTLKHVYEIARIKAQDEAF VAGLVTLKHVYEIARIKAQDEAFALQDVPL K H V A R I 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 7 0 886.4661 Q9Y3B7 Q9Y3B7 116 122 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.036253 110.63 By MS/MS By matching 9 0 2 1 1 3178900 3149500 29388 6170 2927 6385 15238;15239 10851 10851 1 1807500 316720 HVYLDEPIK AIFTCRPNSHPFQERHVYLDEPIKIGRSVA HPFQERHVYLDEPIKIGRSVARCRPAQNNA R H V I K I 0 0 0 1 0 0 1 0 1 1 1 1 0 0 1 0 0 0 1 1 0 0 9 0 1112.5866 Q14BN4 Q14BN4 21 29 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.007684 109.86 By MS/MS 4 0 1 1 562720 562720 0 6171 1454 6386 15240 10852 10852 1 15362 0 HWDQNER FHAFSAGPGLFSYIRHWDQNERFLVVLNFG PGLFSYIRHWDQNERFLVVLNFGDVGLSAG R H W E R F 0 1 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 7 0 983.42094 P08195 P08195 556 562 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.027181 116.9 By MS/MS 4.5 0.5 1 1 2 3056100 3056100 0 6172 499 6387 15241;15242 10853 10853 1 109840 0 HWPFQVINDGDKPK IGRKFGDPVVQSDMKHWPFQVINDGDKPKV KHWPFQVINDGDKPKVQVSYKGETKAFYPE K H W P K V 0 0 1 2 0 1 0 1 1 1 0 2 0 1 2 0 0 1 0 1 0 0 14 1 1679.842 P0DMV9;P0DMV8 P0DMV9 89 102 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.00046806 122.97 By MS/MS 5 0 1 1 1254700 1254700 0 6173 528 6388 15243 10854 10854 1 51575 0 HYAHTDCPGHADYVK ITINAAHVEYSTAARHYAHTDCPGHADYVK HYAHTDCPGHADYVKNMITGTAPLDGCILV R H Y V K N 2 0 0 2 1 0 0 1 3 0 0 1 0 0 1 0 1 0 2 1 0 0 15 0 1769.758 P49411 P49411 121 135 TUFM Elongation factor Tu, mitochondrial yes yes 2;3;4 2.0247E-28 234.67 By MS/MS 6.5 0.5 3 3 6 46232000 46232000 0 6174 918 6389 15244;15245;15246;15247;15248;15249 10855;10856;10857;10858;10859 10859 5 772730 0 HYAMQEAK LTESELSSWIQMSFKHYAMQEAKQQFVEYD WIQMSFKHYAMQEAKQQFVEYDKNSDDTVT K H Y A K Q 2 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 8 0 976.44365 Q14257 Q14257 96 103 RCN2 Reticulocalbin-2 yes yes 2 0.016414 101.6 By MS/MS 7 0.816 1 1 1 3 7876600 7876600 0 6175 1426 6390 15250;15251;15252 10860;10861 10860 1125 2 73160 0 HYCDSEKPR DMIYFWKNEKLYCGRHYCDSEKPRCAGCDE KLYCGRHYCDSEKPRCAGCDELIFSNEYTQ R H Y P R C 0 1 0 1 1 0 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 1 1190.5139 Q9UGI8 Q9UGI8 292 300 TES Testin yes yes 3 0.023465 81.338 By MS/MS 7 0 1 1 697670 697670 0 6176 2772 6391 15253 10862 10862 1 12468 0 HYEDGYPGGSDNYGSLSR TLPRNFHYPPDGYSRHYEDGYPGGSDNYGS DGYPGGSDNYGSLSRVTRIEERYRPSMEGY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 O60716 O60716 216 233 CTNND1 Catenin delta-1 yes yes 2;3 1.3725E-10 203.74 By MS/MS 4.33 0.471 2 1 3 2605900 2605900 0 6177 260 6392 15254;15255;15256 10863;10864 10864 2 73328 0 HYEVEILDAK ______________________________ ______________________________ K H Y A K T 1 0 0 1 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1215.6136 Q9NZ01 Q9NZ01 3 12 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.0010037 140.45 By MS/MS 1 0 1 1 778170 778170 0 6178 2703 6393 15257 10865 10865 1 38020 0 HYHTSAK SIQEAESYAESVGAKHYHTSAKQNKGIEEL YAESVGAKHYHTSAKQNKGIEELFLDLCKR K H Y A K Q 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 1 0 0 0 7 0 842.4035 Q9UL25 Q9UL25 158 164 RAB21 Ras-related protein Rab-21 yes yes 2 0.021851 121.29 By MS/MS 8.5 0.5 1 1 2 152300 152300 0 6179 2819 6394 15258;15259 10866 10866 1 78309 0 HYLFDVQR AIDTEKSQQALVQKRHYLFDVQRNNIAMAL QALVQKRHYLFDVQRNNIAMALEVTYRERL R H Y Q R N 0 1 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1076.5403 P24539 P24539 164 171 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.0062162 132.57 By MS/MS 9 0.816 1 1 1 3 12106000 12106000 0 6180 678 6395 15260;15261;15262 10867 10867 1 6626200 0 HYLFYDGESVSGK RKMAEMKTEDGKVEKHYLFYDGESVSGKVN EKHYLFYDGESVSGKVNLAFKQPGKRLEHQ K H Y G K V 0 0 0 1 0 0 1 2 1 0 1 1 0 1 0 2 0 0 2 1 0 0 13 0 1500.6885 O75436 O75436 39 51 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 0.001121 129.88 By MS/MS 7 0 1 1 1991400 1991400 0 6181 309 6396 15263 10868 10868 1 35587 0 HYLGHTDCVK ASVVVLFNYEERTQRHYLGHTDCVKCLAIH ERTQRHYLGHTDCVKCLAIHPDKIRIATGQ R H Y V K C 0 0 0 1 1 0 0 1 2 0 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1228.5659 Q9HC35 Q9HC35 304 313 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 3 0.030523 77.533 By MS/MS 1 0 1 1 183620 183620 0 6182 2557 6397 15264 10869 10869 1 8971.1 0 HYNGEAYEDDEHHPR QVELVDFDPNQERRRHYNGEAYEDDEHHPR HYNGEAYEDDEHHPRGGVQCQTS_______ R H Y P R G 1 1 1 2 0 0 3 1 3 0 0 0 0 0 1 0 0 0 2 0 0 0 15 0 1867.751 P31689 P31689 375 389 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 5.8318E-06 147.51 By MS/MS 6.5 0.5 2 2 4 14350000 14350000 0 6183 755 6398 15265;15266;15267;15268 10870;10871 10870 2 130190 0 HYQTGQPLPK EYFANDYRVVNQFARHYQTGQPLPKNMVSR NQFARHYQTGQPLPKNMVSRLCESKKVCAA R H Y P K N 0 0 0 0 0 2 0 1 1 0 1 1 0 0 2 0 1 0 1 0 0 0 10 0 1167.6037 Q99797 Q99797 546 555 MIPEP Mitochondrial intermediate peptidase yes yes 2 0.0052354 106.68 By MS/MS 5.5 0.5 1 1 2 1536500 1536500 0 6184 2291 6399 15269;15270 10872 10872 1 27901 0 HYRGPAGDATVASEK DPLPVPTEEGNPLLKHYRGPAGDATVASEK HYRGPAGDATVASEKESVM___________ K H Y E K E 3 1 0 1 0 0 1 2 1 0 0 1 0 0 1 1 1 0 1 1 0 0 15 1 1557.7536 Q15758 Q15758 523 537 SLC1A5 Neutral amino acid transporter B(0) yes yes 3 0.0037237 97.203 By MS/MS By matching 5.33 0.471 2 1 2 1 4439500 4416900 22574 6185 1518 6400 15271;15272;15273 10873 10873 1 112400 66797 HYTEAIKR GNECFQKGDYPQAMKHYTEAIKRNPKDAKL DYPQAMKHYTEAIKRNPKDAKLYSNRAACY K H Y K R N 1 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 8 1 1016.5403 P31948 P31948 382 389 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.0046028 130.27 By MS/MS 5.5 0.5 1 1 2 6525300 6525300 0 6186 762 6401 15274;15275 10874 10874 1 112590 0 IAAAILNTPDLR LIRPMYSNPPLNGARIAAAILNTPDLRKQW GARIAAAILNTPDLRKQWLQEVKVMADRII R I A L R K 3 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1266.7296 P00505 P00505 326 337 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 2.7166E-33 265.67 By MS/MS 8.5 1.12 1 1 1 1 4 10192000 10192000 0 6187 430 6402 15276;15277;15278;15279 10875;10876 10875 2 422530 0 IAAAILNTPDLRK LIRPMYSNPPLNGARIAAAILNTPDLRKQW ARIAAAILNTPDLRKQWLQEVKVMADRIIG R I A R K Q 3 1 1 1 0 0 0 0 0 2 2 1 0 0 1 0 1 0 0 0 0 0 13 1 1394.8245 P00505 P00505 326 338 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 0.0045652 129.16 By MS/MS 7 0 1 1 1310400 1310400 0 6188 430 6403 15280 10877 10877 1 23417 0 IAACQEQILR IIKSGDQTFYKFMKRIAACQEQILRYSWSG KFMKRIAACQEQILRYSWSGEPLFLTCPTS R I A L R Y 2 1 0 0 1 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1200.6285 Q9BRP1 Q9BRP1 257 266 PDCD2L Programmed cell death protein 2-like yes yes 2 0.0059267 104.42 By MS/MS 7 0 1 1 1069300 1069300 0 6189 2325 6404 15281 10878 10878 1 19109 0 IAAENELNQSYK RIIQALKGTIDPKLRIAAENELNQSYKIIN KLRIAAENELNQSYKIINFAPSLLRIIVSD R I A Y K I 2 0 2 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 12 0 1378.6729 O15397 O15397 20 31 IPO8 Importin-8 yes yes 2 7.4578E-17 227.36 By MS/MS 4 0 1 1 1699800 1699800 0 6190 175 6405 15282 10879 10879 1 46403 0 IAAGQAVEAIVK SKVLIYLRSANWDTRIAAGQAVEAIVKNVP DTRIAAGQAVEAIVKNVPEWNPVPRTRQEP R I A V K N 4 0 0 0 0 1 1 1 0 2 0 1 0 0 0 0 0 0 0 2 0 0 12 0 1168.6816 O14981 O14981 60 71 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.00030109 147.91 By MS/MS 2 0.816 1 1 1 3 1701000 1701000 0 6191 143 6406 15283;15284;15285 10880;10881 10880 2 67611 0 IAAGSSDFLVK TTNANHVVFNGDGTKIAAGSSDFLVKIVDV DGTKIAAGSSDFLVKIVDVMDSSQQKTFRG K I A V K I 2 0 0 1 0 0 0 1 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1106.5972 O75717 O75717 109 119 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0045935 109.44 By MS/MS 3.5 0.5 1 1 2 1439400 1439400 0 6192 325 6407 15286;15287 10882 10882 1 37856 0 IAAQLLQQEQK EEEDDDLKEVTDLRKIAAQLLQQEQKNRIL DLRKIAAQLLQQEQKNRILNHSTSVMRNKP K I A Q K N 2 0 0 0 0 4 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1268.7089 Q5VUJ6 Q5VUJ6 476 486 LRCH2 Leucine-rich repeat and calponin homology domain-containing protein 2 yes yes 2 1.8963E-16 228.2 By MS/MS 4 0 1 1 1353000 1353000 0 6193 1651 6408 15288 10883 10883 1 36936 0 IAAQTLLGTAK EGAVKMGMPSSLAHRIAAQTLLGTAKMLLH LAHRIAAQTLLGTAKMLLHEGQHPAQLRSD R I A A K M 3 0 0 0 0 1 0 1 0 1 2 1 0 0 0 0 2 0 0 0 0 0 11 0 1085.6445 Q53H96 Q53H96 208 218 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 2 2.2944E-11 211.86 By MS/MS 8.5 0.5 1 1 2 10212000 10212000 0 6194 1588 6409 15289;15290 10884;10885 10884 2 915480 0 IACGPPQAK GTSEQNDILKVVEKRIACGPPQAKLNGQQA KVVEKRIACGPPQAKLNGQQAALASQYRAM R I A A K L 2 0 0 0 1 1 0 1 0 1 0 1 0 0 2 0 0 0 0 0 0 0 9 0 940.48004 Q9Y520 Q9Y520 221 229 PRRC2C Protein PRRC2C yes yes 2 0.0019115 130.77 By MS/MS 2 0.816 1 1 1 3 783280 783280 0 6195 2963 6410 15291;15292;15293 10886;10887 10887 2 34797 0 IACLDFSLQK VVGSQGMPKRIVNAKIACLDFSLQKTKMKL IVNAKIACLDFSLQKTKMKLGVQVVITDPE K I A Q K T 1 0 0 1 1 1 0 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1193.6114 P17987 P17987 234 243 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00052575 155.58 By MS/MS 5.1 2.47 1 1 1 1 1 2 1 1 1 10 125010000 125010000 0 6196 619 6411 15294;15295;15296;15297;15298;15299;15300;15301;15302;15303 10888;10889;10890;10891;10892;10893 10888 6 1179000 0 IACTQSSAR FMQGKRQKEIWHLLKIACTQSSARSLVGSS IWHLLKIACTQSSARSLVGSSLEGAVTPQT K I A A R S 2 1 0 0 1 1 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 9 0 992.47093 O15111 O15111 656 664 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 2 0.0081433 113.71 By MS/MS 5 0 1 1 0 0 0 6197 149 6412 15304 10894 10894 1 0 0 IADEDRGNWR RPSWRNTDDDRPPRRIADEDRGNWRHADDD RPPRRIADEDRGNWRHADDDRPPRRGLDED R I A W R H 1 2 1 2 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 10 1 1230.5741 Q14152 Q14152 1001 1010 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.05334 101.25 By MS/MS By matching 3.75 0.829 2 1 1 3 1 8042600 8013200 29436 6198 1409 6413 15305;15306;15307;15308 10895 10895 1 211370 42188 IADGYEQAAR EEAEQLLDRGIHPIRIADGYEQAARVAIEH IHPIRIADGYEQAARVAIEHLDKISDSVLV R I A A R V 3 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1092.52 P48643 P48643 133 142 CCT5 T-complex protein 1 subunit epsilon yes yes 2 1.0409E-06 182.39 By MS/MS By MS/MS 5.69 2.55 1 1 1 1 1 3 2 1 1 1 11 2 53137000 52600000 536490 6199 909 6414 15309;15310;15311;15312;15313;15314;15315;15316;15317;15318;15319;15320;15321 10896;10897;10898;10899;10900;10901;10902;10903;10904;10905;10906;10907;10908 10902 13 1557900 1645400 IADKEVTIK KMMENHVSQASVTIRIADKEVTIKVPAGTR ASVTIRIADKEVTIKVPAGTRLLSQPCASD R I A I K V 1 0 0 1 0 0 1 0 0 2 0 2 0 0 0 0 1 0 0 1 0 0 9 1 1015.5914 A3KMH1 A3KMH1 396 404 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 3 0.0562 74.173 By MS/MS 3 0.816 1 1 1 3 506060 506060 0 6200 13 6415 15322;15323;15324 10909 10909 1 20212 0 IADLGLASFK LKPENILVDNDFHIKIADLGLASFKMWSKL DFHIKIADLGLASFKMWSKLNNEEHNELRE K I A F K M 2 0 0 1 0 0 0 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1033.5808 Q13546 Q13546 154 163 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 2 0.0018656 117.7 By MS/MS 5 0 1 1 1194100 1194100 0 6201 1379 6416 15325 10910 10910 1 49081 0 IADRLGLELGK IKIFSGSSHQDLSQKIADRLGLELGKVVTK LSQKIADRLGLELGKVVTKKFSNQETCVEI K I A G K V 1 1 0 1 0 0 1 2 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 1 1183.6925 P60891 P60891 19 29 PRPS1 Ribose-phosphate pyrophosphokinase 1 no no 2;3 0.029537 108.47 By MS/MS 8 0 2 2 5838200 5838200 0 6202 1076 6417 15326;15327 10911;10912 10912 2 385150 0 IADYLTR KYSVDLLMDLLKNPKIADYLTRYEHFSSCL MDLLKNPKIADYLTRYEHFSSCLHQVLGLL K I A T R Y 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 7 0 850.45487 Q8TCG1 Q8TCG1 267 273 KIAA1524 Protein CIP2A yes yes 2 0.022143 120.49 By MS/MS 4 0 1 1 340060 340060 0 6203 1994 6418 15328 10913 10913 1 9283.1 0 IAECSSQLAEEEEK QNSKFIKEKKLMEDRIAECSSQLAEEEEKA RIAECSSQLAEEEEKAKNLAKIRNKQEVMI R I A E K A 2 0 0 0 1 1 5 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 14 0 1621.7141 P35580 P35580 1008 1021 MYH10 Myosin-10 yes yes 2 0.00056923 161.87 By MS/MS 2 0 1 1 111950 111950 0 6204 794 6419 15329 10914 10914 1 5564.7 0 IAEENGAAFAGGTSLIQK INKVAVFTENASEVKIAEENGAAFAGGTSL ENGAAFAGGTSLIQKIWDDEIVADFYVAVP K I A Q K I 4 0 1 0 0 1 2 3 0 2 1 1 0 1 0 1 1 0 0 0 0 0 18 0 1775.9054 Q9BYD6 Q9BYD6 169 186 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 7.8777E-44 263.72 By MS/MS 8 0 1 1 2728300 2728300 0 6205 2415 6420 15330 10915 10915 1 179980 0 IAEESNFPFIK LEGPPHSGKTALAAKIAEESNFPFIKICSP LAAKIAEESNFPFIKICSPDKMIGFSETAK K I A I K I 1 0 1 0 0 0 2 0 0 2 0 1 0 2 1 1 0 0 0 0 0 0 11 0 1293.6605 P46459 P46459 556 566 NSF Vesicle-fusing ATPase yes yes 2 0.00056336 140.17 By MS/MS 6.75 1.48 1 1 1 1 4 9389800 9389800 0 6206 881 6421 15331;15332;15333;15334 10916;10917;10918;10919 10917 4 445910 0 IAEFAFEYAR VVQSIKLITEGASKRIAEFAFEYARNNHRS GASKRIAEFAFEYARNNHRSNVTAVHKANI R I A A R N 3 1 0 0 0 0 2 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 10 0 1215.5924 P50213 P50213 179 188 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.00039842 148.94 By MS/MS 8 0.816 1 1 1 3 9400800 9400800 0 6207 943 6422 15335;15336;15337 10920;10921;10922 10920 3 448570 0 IAEFTTNLTEEEEK QNCKLAKEKKLLEDRIAEFTTNLTEEEEKS RIAEFTTNLTEEEEKSKSLAKLKNKHEAMI R I A E K S 1 0 1 0 0 0 5 0 0 1 1 1 0 1 0 0 3 0 0 0 0 0 14 0 1652.7781 P35579 P35579 1001 1014 MYH9 Myosin-9 yes yes 2 3.7401E-06 210.15 By MS/MS By matching 2 0 2 1 1 448020 429880 18140 6208 793 6423 15338;15339 10923 10923 1 21367 15272 IAEGEHPK GYSGDDINKFLWMVRIAEGEHPKDIRESDY KFLWMVRIAEGEHPKDIRESDYFTPQGEFR R I A P K D 1 0 0 0 0 0 2 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 8 0 879.44503 Q8TCJ2 Q8TCJ2 681 688 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.054049 89.752 By MS/MS 1 0 1 1 167170 167170 0 6209 1995 6424 15340 10924 10924 1 8167.6 0 IAEGGAAHR STPYRAGDAGIFVSRIAEGGAAHRAGTLQV GIFVSRIAEGGAAHRAGTLQVGDRVLSING R I A H R A 3 1 0 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 9 0 880.45151 Q14160 Q14160 897 905 SCRIB Protein scribble homolog yes yes 2 0.041527 84.568 By MS/MS 2 0 1 1 293880 293880 0 6210 1412 6425 15341 10925 10925 1 14607 0 IAELLSPGSVDPLTR RKHINTWVAEKTEGKIAELLSPGSVDPLTR IAELLSPGSVDPLTRLVLVNAVYFRGNWDE K I A T R L 1 1 0 1 0 0 1 1 0 1 3 0 0 0 2 2 1 0 0 1 0 0 15 0 1566.8617 P35237 P35237 146 160 SERPINB6 Serpin B6 yes yes 2 0.00033947 128.85 By MS/MS 7 0 1 1 467170 467170 0 6211 783 6426 15342 10926 10926 1 8348.5 0 IAELMPGASGAEVK HSRKMNLTRGINLRKIAELMPGASGAEVKG KIAELMPGASGAEVKGVCTEAGMYALRERR K I A V K G 3 0 0 0 0 0 2 2 0 1 1 1 1 0 1 1 0 0 0 1 0 0 14 0 1371.7068 P62195 P62195 347 360 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0026676 108.68 By MS/MS By matching 7 0 2 1 1 3554100 3534500 19578 6212 1117 6427 15343;15344 10927 10927 869 1 63162 80373 IAENLGDVQISDK ALQLRQEALEMSRNRIAENLGDVQISDKIT NRIAENLGDVQISDKITISKNFKENVIRPI R I A D K I 1 0 1 2 0 1 1 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1400.7147 Q9H078 Q9H078 521 533 CLPB Caseinolytic peptidase B protein homolog yes yes 2 1.2734E-11 199.4 By MS/MS By MS/MS 7.2 1.17 2 1 1 1 4 1 14023000 13991000 31934 6213 2448 6428 15345;15346;15347;15348;15349 10928;10929 10929 2 291390 97939 IAENLGDVQISDKITISK ALQLRQEALEMSRNRIAENLGDVQISDKIT NLGDVQISDKITISKNFKENVIRPILKAHF R I A S K N 1 0 1 2 0 1 1 1 0 4 1 2 0 0 0 2 1 0 0 1 0 0 18 1 1943.0575 Q9H078 Q9H078 521 538 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.0021418 99.044 By MS/MS 6 0 1 1 8882600 8882600 0 6214 2448 6429 15350 10930 10930 1 69267 0 IAEPSVCGR QVCAHTTRVEMDRGRIAEPSVCGRCHTTHS EMDRGRIAEPSVCGRCHTTHSMALIHNRSL R I A G R C 1 1 0 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 9 0 987.48076 P33991 P33991 322 330 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.0088605 107.29 By MS/MS 3.5 1.12 1 1 1 1 4 3729500 3729500 0 6215 773 6430 15351;15352;15353;15354 10931;10932 10932 2 108790 0 IAEQVASFQEEK ARAIMAQLPQEQKAKIAEQVASFQEEKSKL KAKIAEQVASFQEEKSKLDAEVSKWDDSGN K I A E K S 2 0 0 0 0 2 3 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 12 0 1377.6776 P35221 P35221 684 695 CTNNA1 Catenin alpha-1 yes yes 2 3.7621E-08 194.48 By MS/MS 4 0 1 1 1643500 1643500 0 6216 780 6431 15355 10933 10933 1 44865 0 IAESIPYLK FAKVHYGFILKAQNKIAESIPYLKEGIESG LKAQNKIAESIPYLKEGIESGDPGTDDGRF K I A L K E 1 0 0 0 0 0 1 0 0 2 1 1 0 0 1 1 0 0 1 0 0 0 9 0 1032.5855 Q12797 Q12797 504 512 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 0.0014522 157.33 By MS/MS 4 0 1 1 975760 975760 0 6217 1307 6432 15356 10934 10934 1 26637 0 IAEVDASVVR LTYGRRIPLAEWESRIAEVDASVVREICSK EWESRIAEVDASVVREICSKYIYDQCPAVA R I A V R E 2 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 3 0 0 10 0 1057.5768 P31930 P31930 433 442 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 9.5372E-05 166.16 By MS/MS By MS/MS 6.67 0.471 1 2 2 1 14629000 14629000 0 6218 756 6433 15357;15358;15359 10935;10936;10937 10936 3 209630 0 IAEVDCTAER EELSKKEFPGLAGVKIAEVDCTAERNICSK LAGVKIAEVDCTAERNICSKYSVRGYPTLL K I A E R N 2 1 0 1 1 0 2 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1162.5288 Q8NBS9 Q8NBS9 376 385 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.00081328 131.52 By MS/MS 6 0 1 1 2023500 2023500 0 6219 1945 6434 15360 10938 10938 1 15780 0 IAFAITAIK HILRVLNTNIDGRRKIAFAITAIKGVGRRY IDGRRKIAFAITAIKGVGRRYAHVVLRKAD K I A I K G 3 0 0 0 0 0 0 0 0 3 0 1 0 1 0 0 1 0 0 0 0 0 9 0 946.58515 P62269 P62269 26 34 RPS18 40S ribosomal protein S18 yes yes 2 0.00063152 150.4 By MS/MS 9.5 0.5 1 1 2 4314100 4314100 0 6220 1124 6435 15361;15362 10939;10940 10939 2 3398200 0 IAFDAESDPSNAPGSGTEK PNDQAQRDIIFELRRIAFDAESDPSNAPGS AESDPSNAPGSGTEKRKAMYTKDYKMLGFT R I A E K R 3 0 1 2 0 0 2 2 0 1 0 1 0 1 2 3 1 0 0 0 0 0 19 0 1891.8436 Q96JJ3 Q96JJ3 322 340 ELMO2 Engulfment and cell motility protein 2 yes yes 2 8.1018E-05 127.3 By MS/MS 5 0 1 1 1631000 1631000 0 6221 2210 6436 15363 10941 10941 1 67042 0 IAFGGETDEATR LRHFKRILSLLEGQKIAFGGETDEATRYIA GQKIAFGGETDEATRYIAPTVLTDVDPKTK K I A T R Y 2 1 0 1 0 0 2 2 0 1 0 0 0 1 0 0 2 0 0 0 0 0 12 0 1265.5888 P51648 P51648 300 311 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 0.00047251 139.86 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 35638000 35557000 81529 6222 972 6437 15364;15365;15366;15367 10942;10943;10944;10945 10945 4 392880 250040 IAFGGETDEATRYIAPTVLTDVDPK LRHFKRILSLLEGQKIAFGGETDEATRYIA TRYIAPTVLTDVDPKTKVMQEEIFGPILPI K I A P K T 3 1 0 3 0 0 2 2 0 2 1 1 0 1 2 0 4 0 1 2 0 0 25 1 2678.3439 P51648 P51648 300 324 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 3 0.0012777 66.3 By MS/MS 6 0 1 1 2169600 2169600 0 6223 972 6438 15368 10946 10946 1 16918 0 IAFIMDESNVLDSGFLER DLRTVLRRSGCKNEKIAFIMDESNVLDSGF IMDESNVLDSGFLERMNTLLANGEVPGLFE K I A E R M 1 1 1 2 0 0 2 1 0 2 2 0 1 2 0 2 0 0 0 1 0 0 18 0 2054.9983 Q14204 Q14204 2990 3007 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.014165 74.649 By MS/MS 1.5 0.5 1 1 2 67527 67527 0 6224 1421 6439 15369;15370 10947;10948 10948 1105 2 3328.2 0 IAFLQGER ERAHWEVERAELQARIAFLQGERKGQENLK RAELQARIAFLQGERKGQENLKKDLVRRIK R I A E R K 1 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 932.50797 Q13033 Q13033 97 104 STRN3 Striatin-3 yes yes 2 0.019809 107.01 By MS/MS 4.5 0.5 1 1 2 1740100 1740100 0 6225 1326 6440 15371;15372 10949 10949 1 55622 0 IAFWDDVYGFK ISLVAVSDVNKHADRIAFWDDVYGFKMSCM HADRIAFWDDVYGFKMSCMKKAVIPEAVVE R I A F K M 1 0 0 2 0 0 0 1 0 1 0 1 0 2 0 0 0 1 1 1 0 0 11 0 1359.6499 O60678 O60678 380 390 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.0045399 109.66 By MS/MS 6 0 1 1 1189400 1189400 0 6226 257 6441 15373 10950 10950 1 9275.3 0 IAGLCNR VSFDKTSATWLALSRIAGLCNRAVFQANQE ATWLALSRIAGLCNRAVFQANQENLPILKR R I A N R A 1 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 802.41196 P05023;P50993;Q13733 P05023 424 430 ATP1A1;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 2 0.016067 137.2 By MS/MS 3 1.41 1 1 1 1 1 5 17187000 17187000 0 6227 463 6442 15374;15375;15376;15377;15378 10951;10952;10953;10954 10951 4 598820 0 IAGPGLGSGVR FRVPVKDVVDPSKVKIAGPGLGSGVRARVL SKVKIAGPGLGSGVRARVLQSFTVDSSKAG K I A V R A 1 1 0 0 0 0 0 4 0 1 1 0 0 0 1 1 0 0 0 1 0 0 11 0 982.55598 O75369 O75369 1426 1436 FLNB Filamin-B yes yes 2 0.001946 120.99 By MS/MS 2 0 1 1 293930 293930 0 6228 300 6443 15379 10955 10955 1 14610 0 IAGQVAAANK GGRKLTPQGQRDLDRIAGQVAAANKKH___ RDLDRIAGQVAAANKKH_____________ R I A N K K 4 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 0 941.52943 P39019 P39019 134 143 RPS19 40S ribosomal protein S19 yes yes 2 0.0001842 157.33 By MS/MS 10 0 1 1 3828800 3828800 0 6229 823 6444 15380 10956 10956 1 4069600 0 IAGQVAAANKK GGRKLTPQGQRDLDRIAGQVAAANKKH___ DLDRIAGQVAAANKKH______________ R I A K K H 4 0 1 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 11 1 1069.6244 P39019 P39019 134 144 RPS19 40S ribosomal protein S19 yes yes 2;3 2.1992E-05 176.09 By MS/MS By matching 10 0 4 2 2 3346500 3232200 114250 6230 823 6445 15381;15382;15383;15384 10957;10958 10958 2 3435500 2930400 IAGYVTHLMK CEEIAIIPSKKLRNKIAGYVTHLMKRIQRG KLRNKIAGYVTHLMKRIQRGPVRGISIKLQ K I A M K R 1 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 1 0 1 1 0 0 10 0 1131.6111 P08708 P08708 50 59 RPS17 40S ribosomal protein S17 yes yes 2 0.0033956 107.57 By MS/MS 9.5 0.5 1 1 2 1714200 1714200 0 6231 507 6446 15385;15386 10959;10960 10960 306 2 1650100 0 IAILDIEPQTLK GTKFETVHQIHKQNKIAILDIEPQTLKIVR QNKIAILDIEPQTLKIVRTAELSPFIVFIA K I A L K I 1 0 0 1 0 1 1 0 0 3 2 1 0 0 1 0 1 0 0 0 0 0 12 0 1352.7915 Q00013 Q00013 375 386 MPP1 55 kDa erythrocyte membrane protein yes yes 2 0.0016653 125.74 By MS/MS 6 0 1 1 1515800 1515800 0 6232 1228 6447 15387 10961 10961 1 11820 0 IAILGFAFK SRIIDSLFNTVTDKKIAILGFAFKKDTGDT TVTDKKIAILGFAFKKDTGDTRESSSIYIS K I A F K K 2 0 0 0 0 0 0 1 0 2 1 1 0 2 0 0 0 0 0 0 0 0 9 0 978.59024 O60701 O60701 331 339 UGDH UDP-glucose 6-dehydrogenase yes yes 2 0.0087988 107.43 By MS/MS 6 0 1 1 183290 183290 0 6233 259 6448 15388 10962 10962 1 1429.3 0 IAILTCPFEPPKPK DFSHPQMPKKVEDAKIAILTCPFEPPKPKT KIAILTCPFEPPKPKTKHKLDVTSVEDYKA K I A P K T 1 0 0 0 1 0 1 0 0 2 1 2 0 1 4 0 1 0 0 0 0 0 14 1 1609.8902 P48643 P48643 248 261 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.002258 127.87 By MS/MS 6.4 1.02 1 2 1 1 5 237060000 237060000 0 6234 909 6449 15389;15390;15391;15392;15393 10963;10964;10965;10966 10964 4 1892000 0 IAIPGLAGAGNSVLLVSNLNPER LAIPSAAAAAAAAGRIAIPGLAGAGNSVLL AGNSVLLVSNLNPERVTPQSLFILFGVYGD R I A E R V 3 1 3 0 0 0 1 3 0 2 4 0 0 0 2 2 0 0 0 2 0 0 23 0 2274.2696 P26599 P26599 326 348 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 2 1.1531E-10 147.17 By MS/MS 6 0 1 1 904880 904880 0 6235 697 6450 15394 10967 10967 1 7056.3 0 IAIWTTECENR DVCGAVVNVRAKGDKIAIWTTECENREAVT KGDKIAIWTTECENREAVTHIGRVYKERLG K I A N R E 1 1 1 0 1 0 2 0 0 2 0 0 0 0 0 0 2 1 0 0 0 0 11 0 1391.6503 P06730 P06730 163 173 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 2.9387E-22 244.61 By MS/MS 8.5 0.5 1 1 2 3512700 3512700 0 6236 481 6451 15395;15396 10968;10969 10969 2 1703900 0 IAKEEIFGPVQPLFK FIKPTVFGGVQDDMRIAKEEIFGPVQPLFK IAKEEIFGPVQPLFKFKKIEEVVERANNTR R I A F K F 1 0 0 0 0 1 2 1 0 2 1 2 0 2 2 0 0 0 0 1 0 0 15 1 1714.9658 P30837 P30837 412 426 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2;3 2.4223E-14 212.9 By MS/MS 6 0 2 2 9840600 9840600 0 6237 747 6452 15397;15398 10970;10971 10971 2 76737 0 IALEFLDSK NIEIVGSRLPPGAERIALEFLDSKALCRNI PPGAERIALEFLDSKALCRNIPHMKGKSAM R I A S K A 1 0 0 1 0 0 1 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 9 0 1034.5648 Q53R41 Q53R41 777 785 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.008925 107.15 By MS/MS 4.5 0.5 1 1 2 1768600 1768600 0 6238 1590 6453 15399;15400 10972 10972 1 68923 0 IALLNVELELK YAGFEMQPKKYHNPKIALLNVELELKAEKD HNPKIALLNVELELKAEKDNAEIRVHTVED K I A L K A 1 0 1 0 0 0 2 0 0 1 4 1 0 0 0 0 0 0 0 1 0 0 11 0 1253.7595 Q99832 Q99832 237 247 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0010448 147.73 By MS/MS 6 0 1 1 2607500 2607500 0 6239 2295 6454 15401 10973 10973 1 20333 0 IALLPLLQAETDR NRERRRLQIEDFEARIALLPLLQAETDRRT ARIALLPLLQAETDRRTLQMLRENLEEEAI R I A D R R 2 1 0 1 0 1 1 0 0 1 4 0 0 0 1 0 1 0 0 0 0 0 13 0 1451.8348 Q9P0J0 Q9P0J0 69 81 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 3 0.049792 58.754 By MS/MS 10 0 1 1 29144 29144 0 6240 2726 6455 15402 10974 10974 1 30977 0 IALTDNALIAR ELIYKRGYGKINKKRIALTDNALIARSLGK NKKRIALTDNALIARSLGKYGIICMEDLIH R I A A R S 3 1 1 1 0 0 0 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1169.6768 P18124 P18124 167 177 RPL7 60S ribosomal protein L7 yes yes 2 1.6462E-10 217.66 By MS/MS By MS/MS 8 0 2 1 1 5097500 4880600 216880 6241 622 6456 15403;15404 10975;10976 10976 2 321970 1850300 IALYGLGSIPDER KIDISPVLLQKGSTKIALYGLGSIPDERLY TKIALYGLGSIPDERLYRMFVNKKVTMLRP K I A E R L 1 1 0 1 0 0 1 2 0 2 2 0 0 0 1 1 0 0 1 0 0 0 13 0 1402.7456 P49959 P49959 176 188 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.00096347 131.82 By MS/MS 5 0 1 1 606700 606700 0 6242 942 6457 15405 10977 10977 1 24938 0 IAMTTCEQIVR AVQELVHPVVDRSIKIAMTTCEQIVRKDFA RSIKIAMTTCEQIVRKDFALDSEESRMRIA K I A V R K 1 1 0 0 1 1 1 0 0 2 0 0 1 0 0 0 2 0 0 1 0 0 11 0 1320.653 A5YKK6 A5YKK6 1415 1425 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.017561 91.549 By MS/MS 2 0 2 2 540410 540410 0 6243 19 6458;6459 15406;15407 10978;10979 10979 4 2 26861 0 IANAVVQNLER AAGGMRRGNMGHLTRIANAVVQNLERGPVQ HLTRIANAVVQNLERGPVQTHISEVIRGLP R I A E R G 2 1 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1225.6779 O75170 O75170 483 493 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 2 0.013936 94.363 By MS/MS 4 0 1 1 0 0 0 6244 288 6460 15408 10980 10980 1 0 0 IANLQTDLSDGLR FTRWCNEHLKCVSKRIANLQTDLSDGLRLI KRIANLQTDLSDGLRLIALLEVLSQKKMHR R I A L R L 1 1 1 2 0 1 0 1 0 1 3 0 0 0 0 1 1 0 0 0 0 0 13 0 1414.7416 P21333 P21333 64 76 FLNA Filamin-A yes yes 2 2.5749E-12 211.37 By MS/MS 2 0.707 1 2 1 4 2556100 2556100 0 6245 648 6461 15409;15410;15411;15412 10981;10982;10983 10983 3 99716 0 IANPDQLLTQDVEK LQAFTYYKMGNLDNRIANPDQLLTQDVEKF RIANPDQLLTQDVEKFCNSVVDLYSNLSKP R I A E K F 1 0 1 2 0 2 1 0 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1582.8203 P28288 P28288 182 195 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 4.5382E-12 219.89 By MS/MS 4.2 2.32 1 1 1 1 1 5 13092000 13092000 0 6246 716 6462 15413;15414;15415;15416;15417 10984;10985;10986;10987;10988 10985 5 376420 0 IANPVEGSSGR ANINEIRQMSGAQIKIANPVEGSSGRQVTI AQIKIANPVEGSSGRQVTITGSAASISLAQ K I A G R Q 1 1 1 0 0 0 1 2 0 1 0 0 0 0 1 2 0 0 0 1 0 0 11 0 1085.5465 Q15365 Q15365 315 325 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.034488 80.834 By MS/MS 6.5 1.12 1 1 1 1 4 21788000 21788000 0 6247 1490 6463 15418;15419;15420;15421 10989 10989 1 687710 0 IANPVEGSTDR AKINEIRQMSGAQIKIANPVEGSTDRQVTI AQIKIANPVEGSTDRQVTITGSAASISLAQ K I A D R Q 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 1 0 0 11 0 1157.5677 Q15366 Q15366 323 333 PCBP2 Poly(rC)-binding protein 2 yes yes 2 0.009406 98.898 By MS/MS 7.5 0.5 1 1 2 29251000 29251000 0 6248 1491 6464 15422;15423 10990;10991;10992 10992 3 713700 0 IANRDAEKK LIRSVVALHNLINNKIANRDAEKKEGQEKE NLINNKIANRDAEKKEGQEKEESKKDRKED K I A K K E 2 1 1 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 2 1043.5724 P51665 P51665 280 288 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 3 0.014889 102.62 By MS/MS 7 0 1 1 194180 194180 0 6249 975 6465 15424 10993 10993 1 3470 0 IANVVINQSANDSK SNDSTDGEPEEKRRKIANVVINQSANDSKV KIANVVINQSANDSKVLIDNIPDSSSLIEE K I A S K V 2 0 3 1 0 1 0 0 0 2 0 1 0 0 0 2 0 0 0 2 0 0 14 0 1471.7631 O14981 O14981 249 262 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 3.3601E-18 225.63 By MS/MS 2.5 0.5 1 1 2 825510 825510 0 6250 143 6466 15425;15426 10994 10994 1 32549 0 IAPLAEGALPYNLAELQR LYNASGRLTLADIERIAPLAEGALPYNLAE LAEGALPYNLAELQRQQSPGLGRPIWLQIA R I A Q R Q 4 1 1 0 0 1 2 1 0 1 4 0 0 0 2 0 0 0 1 0 0 0 18 0 1938.0575 O75746 O75746 292 309 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0030309 124.81 By MS/MS 5.5 0.5 1 1 2 2136900 2136900 0 6251 327 6467 15427;15428 10995;10996 10996 2 23835 0 IAPLEEGTLPFNLAEAQR LYEPRGRMTLADIERIAPLEEGTLPFNLAE LEEGTLPFNLAEAQRQKASGDSARPVLLQV R I A Q R Q 3 1 1 0 0 1 3 1 0 1 3 0 0 1 2 0 1 0 0 0 0 0 18 0 1968.0316 Q9UJS0 Q9UJS0 293 310 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 1.6728E-43 290.17 By MS/MS 5.5 1.12 2 2 2 2 8 28547000 28547000 0 6252 2798 6468 15429;15430;15431;15432;15433;15434;15435;15436 10997;10998;10999;11000;11001;11002;11003;11004 11002 8 874480 0 IAPPEAPVTGYMFGK SRTTNFAGILSQGLRIAPPEAPVTGYMFGK IAPPEAPVTGYMFGKGIYFADMVSKSANYC R I A G K G 2 0 0 0 0 0 1 2 0 1 0 1 1 1 3 0 1 0 1 1 0 0 15 0 1576.796 P09874 P09874 879 893 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.010941 92.112 By MS/MS 3.67 0.471 1 2 3 3082400 3082400 0 6253 521 6469;6470 15437;15438;15439 11005;11006 11006 314 2 84053 0 IAPSFAVESIEDALK DRQLFSDKLNEINEKIAPSFAVESIEDALK IAPSFAVESIEDALKAADTIGYPVMIRSAY K I A L K A 3 0 0 1 0 0 2 0 0 2 1 1 0 1 1 2 0 0 0 1 0 0 15 0 1588.8348 P31327 P31327 561 575 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 2 0.024952 73.632 By MS/MS 3.5 0.5 1 1 2 63163 63163 0 6254 752 6471 15440;15441 11007;11008 11007 2 1682.5 0 IAPYVAHNFSK QSLLATRVRTHDLKKIAPYVAHNFSKLFSM DLKKIAPYVAHNFSKLFSMENWGGATFDVA K I A S K L 2 0 1 0 0 0 0 0 1 1 0 1 0 1 1 1 0 0 1 1 0 0 11 0 1245.6506 P11498 P11498 590 600 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.023592 93.556 By MS/MS 4 0.816 1 1 1 3 1269500 1269500 0 6255 555 6472 15442;15443;15444 11009 11009 1 38290 0 IAQEKAEQESGLYR HVCQEIISEWDEQERIAQEKAEQESGLYRY RIAQEKAEQESGLYRYRSRNSRTALSEEEE R I A Y R Y 2 1 0 0 0 2 3 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 14 1 1620.8107 Q9NU22 Q9NU22 3541 3554 MDN1 Midasin yes yes 2 0.037883 103.44 By MS/MS 1 0 1 1 99184 99184 0 6256 2635 6473 15445 11010 11010 1 4845.9 0 IAQETFDAAVR GCTPTSTQAKMVSKRIAQETFDAAVRENIE VSKRIAQETFDAAVRENIEEFAMGPEEAVK R I A V R E 3 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 11 0 1219.6197 Q6NXE6 Q6NXE6 31 41 ARMC6 Armadillo repeat-containing protein 6 yes yes 2 1.9221E-11 212.28 By MS/MS 6.5 0.5 1 1 2 1906300 1906300 0 6257 1694 6474 15446;15447 11011 11011 1 24962 0 IAQGVSGSIQDK SSSQKRYFSEGDKVKIAQGVSGSIQDKGSI KVKIAQGVSGSIQDKGSIQKFVPYLIAGIQ K I A D K G 1 0 0 1 0 2 0 2 0 2 0 1 0 0 0 2 0 0 0 1 0 0 12 0 1201.6303 P20839 P20839 439 450 IMPDH1 Inosine-5-monophosphate dehydrogenase 1 yes yes 2 5.6967E-05 164.48 By MS/MS 6 0 1 1 2445200 2445200 0 6258 646 6475 15448 11012 11012 1 19068 0 IAQLEEELEEEQGNTELINDR KGALALEEKRRLEARIAQLEEELEEEQGNT ELEEEQGNTELINDRLKKANLQIDQINTDL R I A D R L 1 1 2 1 0 2 7 1 0 2 3 0 0 0 0 0 1 0 0 0 0 0 21 0 2471.1664 P35579 P35579 1731 1751 MYH9 Myosin-9 yes yes 2 1.0702E-08 153.95 By MS/MS 2 0 1 1 199290 199290 0 6259 793 6476 15449 11013 11013 1 9905.7 0 IAQLEEQLDNETK VKSKYKASITALEAKIAQLEEQLDNETKER AKIAQLEEQLDNETKERQAACKQVRRTEKK K I A T K E 1 0 1 1 0 2 3 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 13 0 1529.7573 P35579 P35579 1816 1828 MYH9 Myosin-9 yes yes 2 8.4722E-35 260.57 By MS/MS By matching 2.33 0.471 2 1 2 1 1137800 1101200 36548 6260 793 6477 15450;15451;15452 11014 11014 1 51306 30770 IAQPGDHVSVTGIFLPILR IPRSITVLVEGENTRIAQPGDHVSVTGIFL GDHVSVTGIFLPILRTGFRQVVQGLLSETY R I A L R T 1 1 0 1 0 1 0 2 1 3 2 0 0 1 2 1 1 0 0 2 0 0 19 0 2032.1469 P33993 P33993 264 282 MCM7 DNA replication licensing factor MCM7 yes yes 3 0.010183 69.979 By MS/MS 6 0 1 1 1136400 1136400 0 6261 775 6478 15453 11015 11015 1 8861.6 0 IAQSDYIPTQQDVLR QLNDSAAYYLNDLERIAQSDYIPTQQDVLR IAQSDYIPTQQDVLRTRVKTTGIVETHFTF R I A L R T 1 1 0 2 0 3 0 0 0 2 1 0 0 0 1 1 1 0 1 1 0 0 15 0 1745.8948 P04899 P04899 163 177 GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes yes 2 0.00047842 124.38 By MS/MS 7.5 0.5 1 1 2 2899500 2899500 0 6262 460 6479 15454;15455 11016;11017 11016 2 122890 0 IARDEGGK GTDIMYTGTLDCWRKIARDEGGKAFFKGAW TLDCWRKIARDEGGKAFFKGAWSNVLRGMG K I A G K A 1 1 0 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 8 1 844.44028 P05141 P05141 261 268 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 3.5762E-07 215.39 By MS/MS By matching 4.4 3.01 1 1 1 2 4 1 4091000 4060600 30418 6263 469 6480 15456;15457;15458;15459;15460 11018;11019;11020 11020 3 219150 259510 IAREEHGSGK QHQGFGMLLMEEAERIAREEHGSGKIAVIS EEAERIAREEHGSGKIAVISGVGTRNYYRK R I A G K I 1 1 0 0 0 0 2 2 1 1 0 1 0 0 0 1 0 0 0 0 0 0 10 1 1082.5469 Q9H9T3 Q9H9T3 508 517 ELP3 Elongator complex protein 3 yes yes 2;3 0.0035012 145.99 By MS/MS 6 0 2 2 250340 250340 0 6264 2538 6481 15461;15462 11021;11022 11021 2 1952.2 0 IARELAEDDSILK RIAAEEKKKQDELKRIARELAEDDSILK__ KRIARELAEDDSILK_______________ R I A L K - 2 1 0 2 0 0 2 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 13 1 1471.7882 P56385 P56385 57 69 ATP5I ATP synthase subunit e, mitochondrial yes yes 2;3 0.0021984 160.86 By MS/MS By matching 10 0 5 4 1 23729000 23698000 31302 6265 1046 6482 15463;15464;15465;15466;15467 11023;11024;11025;11026 11023 4 25188000 802870 IASHSHVK ______________________________ STTKTQRIASHSHVKGLGLDESGLAKQAAS R I A V K G 1 0 0 0 0 0 0 0 2 1 0 1 0 0 0 2 0 0 0 1 0 0 8 0 877.477 Q9Y265 Q9Y265 15 22 RUVBL1 RuvB-like 1 yes yes 2 0.0016808 161.9 By MS/MS By matching 8.6 1.5 1 1 1 2 4 1 11471000 11376000 95115 6266 2870 6483 15468;15469;15470;15471;15472 11027;11028;11029;11030 11027 4 128000 2439600 IASLEVENQSLR ASSGTSGDHGELVVRIASLEVENQSLRGVV VVRIASLEVENQSLRGVVQELQQAISKLEA R I A L R G 1 1 1 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 12 0 1357.7201 P29692 P29692 84 95 EEF1D Elongation factor 1-delta yes yes 2 5.7978E-56 289.96 By MS/MS By matching 8.17 1.07 2 2 1 1 4 2 25402000 25326000 75503 6267 726 6484 15473;15474;15475;15476;15477;15478 11031;11032;11033 11031 3 1012700 553030 IASNVLNTK VTWSMQEDGLLVLCRIASNVLNTKVKGPFV LLVLCRIASNVLNTKVKGPFVTWQVVRDIL R I A T K V 1 0 2 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 Q12789 Q12789 1278 1286 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.02555 93.598 By MS/MS 2.5 0.5 1 1 2 1360200 1360200 0 6268 1306 6485 15479;15480 11034 11034 1 61022 0 IASVAVQQIEK FISSTDYLSTLLLDRIASVAVQQIEKIHPF LLDRIASVAVQQIEKIHPFTIPAIIRPFSV R I A E K I 2 0 0 0 0 2 1 0 0 2 0 1 0 0 0 1 0 0 0 2 0 0 11 0 1184.6765 Q53R41 Q53R41 557 567 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 5.5531E-22 238.01 By MS/MS 5 0 1 1 2660700 2660700 0 6269 1590 6486 15481 11035 11035 1 109370 0 IASWADLVNAHVVPGSGVVK IGNTVKKQYEGGIFKIASWADLVNAHVVPG DLVNAHVVPGSGVVKGLQEVGLPLHRGCLL K I A V K G 3 0 1 1 0 0 0 2 1 1 1 1 0 0 1 2 0 1 0 5 0 0 20 0 2018.0949 P11172 P11172 333 352 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 3 8.9234E-05 118.23 By MS/MS 6 0 1 1 2393600 2393600 0 6270 548 6487 15482 11036 11036 1 18665 0 IATANMLGIR EERERNNQNPWTFERIATANMLGIRKVLSP WTFERIATANMLGIRKVLSPYDLTHKGKYW R I A I R K 2 1 1 0 0 0 0 1 0 2 1 0 1 0 0 0 1 0 0 0 0 0 10 0 1058.5906 Q9NX20 Q9NX20 218 227 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 2 0.0035821 106.68 By MS/MS 8 0 1 1 2257200 2257200 0 6271 2676 6488 15483 11037 11037 1575 1 148910 0 IATEKDFLEAVNK VCTEAGMFAIRARRKIATEKDFLEAVNKVI RKIATEKDFLEAVNKVIKSYAKFSATPRYM K I A N K V 2 0 1 1 0 0 2 0 0 1 1 2 0 1 0 0 1 0 0 1 0 0 13 1 1476.7824 P35998 P35998 403 415 PSMC2 26S protease regulatory subunit 7 yes yes 2;3 2.4851E-11 210.44 By MS/MS 6.5 0.5 2 2 4 13315000 13315000 0 6272 801 6489 15484;15485;15486;15487 11038;11039;11040;11041 11038 4 176050 0 IATGSFLK APQCEMIPIEWVCRRIATGSFLKRNPGVKE IEWVCRRIATGSFLKRNPGVKEGYKFYPPK R I A L K R 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 1 1 0 0 0 0 0 8 0 835.48035 P22234 P22234 103 110 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.01687 110.81 By MS/MS 7 0.816 1 1 1 3 8657200 8657200 0 6273 656 6490 15488;15489;15490 11042 11042 1 149690 0 IAVDELFTSLR TDWDSSINLTFHKSKIAVDELFTSLRDIAG HKSKIAVDELFTSLRDIAGARSLLKQFKSV K I A L R D 1 1 0 1 0 0 1 0 0 1 2 0 0 1 0 1 1 0 0 1 0 0 11 0 1262.6871 Q8WU76 Q8WU76 535 545 SCFD2 Sec1 family domain-containing protein 2 yes yes 2 0.0017986 122.96 By MS/MS 5 0 1 1 238580 238580 0 6274 2012 6491 15491 11043 11043 1 9806.6 0 IAVEPVNPSELPK QIFRPLKFNTTSVIKIAVEPVNPSELPKML IKIAVEPVNPSELPKMLDGLRKVNKSYPSL K I A P K M 1 0 1 0 0 0 2 0 0 1 1 1 0 0 3 1 0 0 0 2 0 0 13 0 1391.766 Q15029 Q15029 590 602 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0038017 114.71 By MS/MS 2.5 1.12 1 1 1 1 4 11723000 11723000 0 6275 1466 6492 15492;15493;15494;15495 11044;11045 11045 2 323810 0 IAVHCTVR ARYTVRSFGIRRNEKIAVHCTVRGAKAEEI GIRRNEKIAVHCTVRGAKAEEILEKGLKVR K I A V R G 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 2 0 0 8 0 954.50692 P62913 P62913 68 75 RPL11 60S ribosomal protein L11 yes yes 2 0.0029729 150.17 By MS/MS 9 0 1 1 471450 471450 0 6276 1161 6493 15496 11046 11046 1 270570 0 IAVVAFFPENGVSDFQK VLNGFSRLNKNDKQRIAVVAFFPENGVSDF VVAFFPENGVSDFQKAQIIGSQRENGWAVG R I A Q K A 2 0 1 1 0 1 1 1 0 1 0 1 0 3 1 1 0 0 0 3 0 0 17 0 1866.9516 Q8IYQ7 Q8IYQ7 401 417 THNSL1 Threonine synthase-like 1 yes yes 2 0.0082993 96.059 By MS/MS 5 0 1 1 139470 139470 0 6277 1882 6494 15497 11047 11047 1 5732.9 0 IAVYSCPFDGMITETK KKETEGDVTSVKDAKIAVYSCPFDGMITET AVYSCPFDGMITETKGTVLIKTAEELMNFS K I A T K G 1 0 0 1 1 0 1 1 0 2 0 1 1 1 1 1 2 0 1 1 0 0 16 0 1830.8532 P50990 P50990 239 254 CCT8 T-complex protein 1 subunit theta yes yes 2 2.5315E-29 246.26 By MS/MS 5.38 1.96 1 1 1 1 3 4 3 2 16 158350000 158350000 0 6278 955 6495;6496 15498;15499;15500;15501;15502;15503;15504;15505;15506;15507;15508;15509;15510;15511;15512;15513 11048;11049;11050;11051;11052;11053;11054;11055;11056 11052 706 9 1391600 0 IAYFTLPK DNITVRWDLGLNKKRIAYFTLPKTDSGNED LGLNKKRIAYFTLPKTDSGNEDLVIIWLRD R I A P K T 1 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 0 1 0 0 0 8 0 951.54295 Q92900 Q92900 342 349 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.004786 139.68 By MS/MS 3.5 0.5 1 1 2 823220 823220 0 6279 2088 6497 15514;15515 11057 11057 1 21626 0 IAYQLAVEAESEQK PEHRFELALQLGELKIAYQLAVEAESEQKW KIAYQLAVEAESEQKWKQLAELAISKCQFG K I A Q K W 3 0 0 0 0 2 3 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 14 0 1577.7937 P35606 P35606 656 669 COPB2 Coatomer subunit beta yes yes 2 5.3796E-06 172.33 By MS/MS 2.5 1.12 1 1 1 1 4 749390 749390 0 6280 795 6498 15516;15517;15518;15519 11058 11058 1 28607 0 IAYTFAR EVTGQLGEVMKESARIAYTFARAFLMQHAP EVMKESARIAYTFARAFLMQHAPANDYLVT R I A A R A 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 7 0 840.44939 P36776 P36776 816 822 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.042356 106.42 By MS/MS 4 0 1 1 1650100 1650100 0 6281 809 6499 15520 11059 11059 1 45046 0 ICALENELAALR QLKTPALANEEALQKICALENELAALRAQI LQKICALENELAALRAQIAKIVTQQEQQNL K I C L R A 3 1 1 0 1 0 2 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 12 0 1371.718 Q15390 Q15390 144 155 MTFR1 Mitochondrial fission regulator 1 yes yes 2 0.00074093 143.5 By MS/MS 7 0 1 1 0 0 0 6282 1496 6500 15521 11060 11060 1 0 0 ICAVGITK IIPEIQKVSGNVEKKICAVGITKLLTECPP SGNVEKKICAVGITKLLTECPPMMDTEYTK K I C T K L 1 0 0 0 1 0 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 0 8 0 860.47897 P55060 P55060 841 848 CSE1L Exportin-2 yes yes 2 0.008595 123.69 By MS/MS 4 0 1 1 3466500 3466500 0 6283 1025 6501 15522 11061 11061 1 94631 0 ICDDELILIK EAAMLGQAEEVVQERICDDELILIKNTKAR VVQERICDDELILIKNTKARTSASIILRGA R I C I K N 0 0 0 2 1 0 1 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1230.653 P17987 P17987 356 365 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.2712E-05 175.51 By MS/MS By MS/MS 5.53 2.19 1 1 1 1 2 4 2 2 1 14 1 387520000 387410000 105550 6284 619 6502 15523;15524;15525;15526;15527;15528;15529;15530;15531;15532;15533;15534;15535;15536;15537 11062;11063;11064;11065;11066;11067;11068;11069;11070;11071;11072 11066 11 3817500 323720 ICDDELILIKNTK EAAMLGQAEEVVQERICDDELILIKNTKAR ERICDDELILIKNTKARTSASIILRGANDF R I C T K A 0 0 1 2 1 0 1 0 0 3 2 2 0 0 0 0 1 0 0 0 0 0 13 1 1573.8385 P17987 P17987 356 368 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 1.1195E-17 284.47 By MS/MS 4.58 2.29 2 1 1 1 2 2 2 1 12 14826000 14826000 0 6285 619 6503 15538;15539;15540;15541;15542;15543;15544;15545;15546;15547;15548;15549 11073;11074;11075;11076 11075 4 273100 0 ICDECNYGSYQGR CVICDSYVRPCTLVRICDECNYGSYQGRCV VRICDECNYGSYQGRCVICGGPGVSDAYYC R I C G R C 0 1 1 1 2 1 1 2 0 1 0 0 0 0 0 1 0 0 2 0 0 0 13 0 1620.6297 Q7RTV0 Q7RTV0 45 57 PHF5A PHD finger-like domain-containing protein 5A yes yes 2 6.5787E-13 213.63 By MS/MS 10 0 1 1 406650 406650 0 6286 1775 6504 15550 11077 11077 1 432230 0 ICEEAFAR VNQPEYEEEISKYDKICEEAFARSKDEKIL EISKYDKICEEAFARSKDEKILHIKHWLDS K I C A R S 2 1 0 0 1 0 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 8 0 994.45422 Q02218 Q02218 565 572 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.02399 101.6 By matching By MS/MS 4 0 2 1 1 658390 571340 87053 6287 1251 6505 15551;15552 11078 11078 1 15597 181900 ICKGDHWTTR DPMNKLKGQKIVSCRICKGDHWTTRCPYKD IVSCRICKGDHWTTRCPYKDTLGPMQKELA R I C T R C 0 1 0 1 1 0 0 1 1 1 0 1 0 0 0 0 2 1 0 0 0 0 10 1 1272.6033 O75821 O75821 159 168 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 3 0.030771 92.538 By MS/MS 7 0 1 1 3646200 3646200 0 6288 330 6506 15553 11079 11079 1 65159 0 ICLDQQNPLYK CPSPQLIATLKTGRKICLDQQNPLYKKIIK TGRKICLDQQNPLYKKIIKRLLKS______ K I C Y K K 0 0 1 1 1 2 0 0 0 1 2 1 0 0 1 0 0 0 1 0 0 0 11 0 1390.6915 CON__P02777 CON__P02777 211 221 yes yes 2 0.0017952 125.71 By MS/MS 10 0 1 1 195530 195530 0 + 6289 44 6507 15554 11080 11080 1 207830 0 ICLEIMQR KYKDMNQFGEGEQAKICLEIMQRTGAHLEL GEGEQAKICLEIMQRTGAHLELSLAKDQGL K I C Q R T 0 1 0 0 1 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 8 0 1061.5362 Q00341 Q00341 103 110 HDLBP Vigilin yes yes 2 0.019122 107.9 By MS/MS 3.33 0.471 2 1 3 1122200 1122200 0 6290 1231 6508;6509 15555;15556;15557 11081;11082 11082 1005 2 29365 0 ICLQPPPTSR GEAGEGPGWGGAHPRICLQPPPTSRTPFPP GAHPRICLQPPPTSRTPFPPPRLPALEQGP R I C S R T 0 1 0 0 1 1 0 0 0 1 1 0 0 0 3 1 1 0 0 0 0 0 10 0 1167.607 P26640 P26640 40 49 VARS Valine--tRNA ligase yes yes 2 0.0072207 101.25 By MS/MS 3 0 1 1 2140400 2140400 0 6291 699 6510 15558 11083 11083 1 55876 0 ICNEILTSPCSPEIR QDYQALTVHDNLAMKICNEILTSPCSPEIR ICNEILTSPCSPEIRVYTKALSSLELSSHL K I C I R V 0 1 1 0 2 0 2 0 0 3 1 0 0 0 2 2 1 0 0 0 0 0 15 0 1787.8546 Q9BPX3 Q9BPX3 834 848 NCAPG Condensin complex subunit 3 yes yes 2 4.0638E-14 195.72 By MS/MS 4 0 1 1 2407100 2407100 0 6292 2302 6511 15559 11084 11084 1 65712 0 ICNQVLVCER IGKKLFTKQTGEKGRICNQVLVCERKYPRR GEKGRICNQVLVCERKYPRREYYFAITMER R I C E R K 0 1 1 0 2 1 1 0 0 1 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1289.622 Q9P2R7 Q9P2R7 151 160 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 6.9469E-07 186.78 By MS/MS 7.5 0.5 1 1 2 19878000 19878000 0 6293 2741 6512 15560;15561 11085 11085 1 372740 0 ICPVEFNPNFVAR GSRGFPLRLQATEVRICPVEFNPNFVARMI VRICPVEFNPNFVARMIPKVEWSAFLEAAD R I C A R M 1 1 2 0 1 0 1 0 0 1 0 0 0 2 2 0 0 0 0 2 0 0 13 0 1561.7711 Q9UI30 Q9UI30 32 44 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 0.0028436 115.18 By MS/MS 10 0 1 1 1828900 1828900 0 6294 2788 6513 15562 11086 11086 1 1944000 0 ICQELTAAAR KERTIRGSELPVLERICQELTAAARPFRRL PVLERICQELTAAARPFRRLEASRDQLRQL R I C A R P 3 1 0 0 1 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1131.5706 Q9BW92 Q9BW92 184 193 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.00040831 148.56 By MS/MS 5 0 1 1 5353400 5353400 0 6295 2391 6514 15563 11087 11087 1 220050 0 ICQEVLPK QFHNVKPECLEAYNKICQEVLPKIHEDKHY CLEAYNKICQEVLPKIHEDKHYPCTLVGTW K I C P K I 0 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 8 0 985.52665 O75323 O75323 92 99 GBAS Protein NipSnap homolog 2 yes yes 2 0.003131 148.99 By MS/MS 8.5 0.5 1 1 2 23311000 23311000 0 6296 296 6515 15564;15565 11088 11088 1 1585900 0 ICQGCPHR AMLSKVLGGSFADQKICQGCPHRYECEESF GSFADQKICQGCPHRYECEESFTTLNVDIR K I C H R Y 0 1 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 8 0 1026.4488 Q93008;O00507 Q93008 1723 1730 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.008595 124.37 By MS/MS 1.5 0.5 1 1 2 213940 213940 0 6297 2096 6516 15566;15567 11089 11089 1 10622 0 ICQIVSTR LGLDPTQEDCVATHRICQIVSTRSASLCAA DCVATHRICQIVSTRSASLCAATLAAVLQR R I C T R S 0 1 0 0 1 1 0 0 0 2 0 0 0 0 0 1 1 0 0 1 0 0 8 0 975.51715 P52789 P52789 374 381 HK2 Hexokinase-2 yes yes 2 0.038799 95.741 By MS/MS 4 0 1 1 2081500 2081500 0 6298 992 6517 15568 11090 11090 1 56823 0 ICRPLLIVEK DIREREIRIYTDAGRICRPLLIVEKQKLLL TDAGRICRPLLIVEKQKLLLKKRHIDQLKE R I C E K Q 0 1 0 0 1 0 1 0 0 2 2 1 0 0 1 0 0 0 0 1 0 0 10 1 1239.7373 P30876 P30876 621 630 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.021798 92.611 By MS/MS 4 0.816 1 1 1 3 2582800 2582800 0 6299 748 6518 15569;15570;15571 11091 11091 1 70027 0 ICSKPVVLPK LRNCISTVVHQGLIRICSKPVVLPKGPESE QGLIRICSKPVVLPKGPESESEDHRASGEV R I C P K G 0 0 0 0 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 10 1 1139.6737 P78527 P78527 490 499 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0021249 110.41 By MS/MS 3.14 1.81 2 1 1 1 1 1 7 4388400 4388400 0 6300 1197 6519 15572;15573;15574;15575;15576;15577;15578 11092;11093;11094;11095 11095 4 176320 0 ICSLHSLPPQS KMKNYNKPWEPKWTKICSLHSLPPQS____ KWTKICSLHSLPPQS_______________ K I C Q S - 0 0 0 0 1 1 0 0 1 1 2 0 0 0 2 3 0 0 0 0 0 0 11 0 1237.6125 P03928 P03928 58 68 MT-ATP8 ATP synthase protein 8 yes yes 2 0.0017952 137.05 By MS/MS 10 0 2 2 1904300 1904300 0 6301 440 6520 15579;15580 11096;11097;11098;11099;11100 11097 5 2024100 0 IDAAEGPSDIPD LRAAAGGTRGSNHARIDAAEGPSDIPD___ HARIDAAEGPSDIPD_______________ R I D P D - 2 0 0 3 0 0 1 1 0 2 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1198.5354 P42771 P42771 145 156 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 2 0.026798 81.525 By MS/MS 10 0 1 1 742750 742750 0 6302 857 6521 15581 11101 11101 1 789460 0 IDAFHYVQLGTAYR IRGLHYDIQKSLLMKIDAFHYVQLGTAYRG KIDAFHYVQLGTAYRGLQPVPDEEVIELYG K I D Y R G 2 1 0 1 0 1 0 1 1 1 1 0 0 1 0 0 1 0 2 1 0 0 14 0 1652.8311 Q9H857 Q9H857 133 146 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 3 0.019133 75.483 By MS/MS 6 0 1 1 3641800 3641800 0 6303 2522 6522 15582 11102 11102 1 28399 0 IDALEFLPFEGK HTFNKTLTQEEKIKRIDALEFLPFEGKVNL IKRIDALEFLPFEGKVNLKKPQHVFSVLED R I D G K V 1 0 0 1 0 0 2 1 0 1 2 1 0 2 1 0 0 0 0 0 0 0 12 0 1377.718 Q7Z4G4 Q7Z4G4 128 139 TRMT11 tRNA (guanine(10)-N2)-methyltransferase homolog yes yes 2 0.042255 76.843 By MS/MS 6.5 0.5 1 1 2 408550 408550 0 6304 1792 6523 15583;15584 11103 11103 1 3658 0 IDASKNEEDEGHSNSSPR SGGTEGGSAESEGAKIDASKNEEDEGHSNS SKNEEDEGHSNSSPRHSEAATAQREEWKMF K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 Q14103 Q14103 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 3 0.0015092 105.02 By MS/MS 7 0 1 1 1270300 1270300 0 6305 1406 6524 15585 11104 11104 1 22700 0 IDATSASVLASR ANILKDKDPPIPVAKIDATSASVLASRFDV VAKIDATSASVLASRFDVSGYPTIKILKKG K I D S R F 3 1 0 1 0 0 0 0 0 1 1 0 0 0 0 3 1 0 0 1 0 0 12 0 1189.6303 P13667 P13667 120 131 PDIA4 Protein disulfide-isomerase A4 yes yes 2 4.7697E-11 204.56 By MS/MS 5 0 1 1 2793800 2793800 0 6306 577 6525 15586 11105 11105 1 114840 0 IDAVAWNTTPYQLAR KEPRTIKISLPGGQKIDAVAWNTTPYQLAR IDAVAWNTTPYQLARQISSTLADTAVAAQV K I D A R Q 3 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 2 1 1 1 0 0 15 0 1717.8788 Q9BW92 Q9BW92 71 85 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 1.6877E-15 213.63 By MS/MS 4.5 0.5 1 1 2 2595400 2595400 0 6307 2391 6526 15587;15588 11106 11106 1 105660 0 IDCFSEVPTSVFGEK RISRYLANKCSIASRIDCFSEVPTSVFGEK IDCFSEVPTSVFGEKLREQVEERLSFYETG R I D E K L 0 0 0 1 1 0 2 1 0 1 0 1 0 2 1 2 1 0 0 2 0 0 15 0 1713.792 O00567 O00567 382 396 NOP56 Nucleolar protein 56 yes yes 2 0.0040225 107.97 By MS/MS 5 0 1 1 730010 730010 0 6308 104 6527 15589 11107 11107 1 30007 0 IDDILQTLLDATYK IFYKAIQKRRQSQEKIDDILQTLLDATYKD KIDDILQTLLDATYKDGRPLTDDEVAGMLI K I D Y K D 1 0 0 3 0 1 0 0 0 2 3 1 0 0 0 0 2 0 1 0 0 0 14 0 1620.8611 Q16850 Q16850 278 291 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 7.6484E-06 174.72 By MS/MS 6 0 1 1 1246500 1246500 0 6309 1551 6528 15590 11108 11108 1 9720.4 0 IDDIRKPGESEE QQISLATQMVRMILKIDDIRKPGESEE___ ILKIDDIRKPGESEE_______________ K I D E E - 0 1 0 2 0 0 3 1 0 2 0 1 0 0 1 1 0 0 0 0 0 0 12 2 1386.6627 P48643 P48643 530 541 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.05031 101.39 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 60555000 60555000 0 6310 909 6529 15591;15592;15593;15594;15595;15596;15597;15598 11109 11109 1 748810 0 IDDIVSGHK QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ AVLLLRIDDIVSGHKKKGDDQSRQGGAPDA R I D H K K 0 0 0 2 0 0 0 1 1 2 0 1 0 0 0 1 0 0 0 1 0 0 9 0 982.50836 P49368 P49368 519 527 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.00029272 158.07 By MS/MS By matching 7.6 1.74 1 3 1 1 2 2 9 1 79786000 79759000 26528 6311 916 6530 15599;15600;15601;15602;15603;15604;15605;15606;15607;15608 11110;11111;11112;11113;11114 11111 5 1333300 81361 IDDIVSGHKK QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ VLLLRIDDIVSGHKKKGDDQSRQGGAPDAG R I D K K K 0 0 0 2 0 0 0 1 1 2 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1110.6033 P49368 P49368 519 528 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.025073 102.62 By MS/MS 5.5 0.5 1 1 2 51980000 51980000 0 6312 916 6531 15609;15610 11115 11115 1 457630 0 IDDVVNTR SALTLATETVRSILKIDDVVNTR_______ TVRSILKIDDVVNTR_______________ K I D T R - 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 2 0 0 8 0 930.47706 P50991 P50991 532 539 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0024425 154.12 By MS/MS By matching 7.5 1.71 1 1 1 1 1 1 5 1 5615300 5569300 46002 6313 956 6532 15611;15612;15613;15614;15615;15616 11116;11117;11118 11117 3 436310 141080 IDEELVTNSGK YLIEYPIDPVTQEFKIDEELVTNSGKFLIL QEFKIDEELVTNSGKFLILDRMLPELKKRG K I D G K F 0 0 1 1 0 0 2 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1203.5983 Q9NRZ9 Q9NRZ9 590 600 HELLS Lymphoid-specific helicase yes yes 2 0.0011212 147.73 By MS/MS 4 0 1 1 2527800 2527800 0 6314 2619 6533 15617 11119 11119 1 69007 0 IDELEPR VLELQGLQKNMTRFRIDELEPRRPRYRVPD QKNMTRFRIDELEPRRPRYRVPDVLVADPP R I D P R R 0 1 0 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 7 0 870.4447 Q14697 Q14697 103 109 GANAB Neutral alpha-glucosidase AB yes yes 2 0.017211 134.06 By MS/MS 4 0 1 1 1225600 1225600 0 6315 1443 6534 15618 11120 11120 1 33457 0 IDELQVVK DADPSSLLQDCRLLRIDELQVVKTGGTPKV QDCRLLRIDELQVVKTGGTPKVPDCFQRTP R I D V K T 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 942.5386 O95071 O95071 713 720 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0070472 129.47 By MS/MS 1 0 1 1 515990 515990 0 6316 364 6535 15619 11121 11121 1 25210 0 IDEPLEGSEDR QRIKQIRHESGASIKIDEPLEGSEDRIITI ASIKIDEPLEGSEDRIITITGTQDQIQNAQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1258.5677 P61978 P61978 423 433 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 0.018363 90.827 By MS/MS By matching 6 0 2 1 1 1939800 1910500 29316 6317 1110 6536 15620;15621 11122 11122 1 14898 89909 IDESIHLQLR MHALLAIALTMYPMRIDESIHLQLREKYGD MYPMRIDESIHLQLREKYGDKMLRMQKGDP R I D L R E 0 1 0 1 0 1 1 0 1 2 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1222.667 Q9Y262 Q9Y262 382 391 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 0.0050434 99.815 By MS/MS 5.5 0.5 1 1 2 6927700 6927700 0 6318 2868 6537 15622;15623 11123 11123 1 102850 0 IDEYDYSKPIQGQQK KESRGAHAREDYKVRIDEYDYSKPIQGQQK IDEYDYSKPIQGQQKKPFEEHWRKHTLSYV R I D Q K K 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 1 0 0 2 0 0 0 15 1 1810.8737 P31040 P31040 601 615 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 3 6.7011E-05 135.04 By MS/MS By matching 5 0 2 1 1 4058500 4037000 21500 6319 749 6538 15624;15625 11124 11124 1 165940 63619 IDFDSVSSIMASSQ CSQEESIKPKNIVEKIDFDSVSSIMASSQ_ KIDFDSVSSIMASSQ_______________ K I D S Q - 1 0 0 2 0 1 0 0 0 2 0 0 1 1 0 5 0 0 0 1 0 0 14 0 1485.6657 Q9UBQ5 Q9UBQ5 205 218 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.00010627 147.28 By MS/MS 9 0 2 2 767590 767590 0 6320 2755 6539;6540 15626;15627 11125;11126 11126 1608 2 440530 0 IDGALHR RRNVDPFHIYFCNLKIDGALHRELVKRYQE HIYFCNLKIDGALHRELVKRYQEKWDKLLL K I D H R E 1 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 780.42424 Q7L0Y3 Q7L0Y3 250 256 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.016553 135.87 By MS/MS 7 0 1 1 4349600 4349600 0 6321 1761 6541 15628 11127 11127 1 77728 0 IDGGITGNMR LLEDFLEHEGYKYERIDGGITGNMRQEAID YKYERIDGGITGNMRQEAIDRFNAPGAQQF R I D M R Q 0 1 1 1 0 0 0 3 0 2 0 0 1 0 0 0 1 0 0 0 0 0 10 0 1032.5022 Q14839 Q14839 1096 1105 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.0029508 116.37 By MS/MS 2 0 1 1 0 0 0 6322 1449 6542 15629 11128 11128 1 0 0 IDGLLIDQIQR RYFGGMVWYFVNNKKIDGLLIDQIQRDLID NNKKIDGLLIDQIQRDLIDDATNLVQLYHV K I D Q R D 0 1 0 2 0 2 0 1 0 3 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1282.7245 P82650 P82650 281 291 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 2.1551E-22 246.59 By MS/MS 8.33 1.25 1 1 1 3 18989000 18989000 0 6323 1201 6543 15630;15631;15632 11129;11130 11129 2 408310 0 IDGSANLK FAPNNTGKEVTVECKIDGSANLKSQDDRDK EVTVECKIDGSANLKSQDDRDKFLGRVMFK K I D L K S 1 0 1 1 0 0 0 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 816.43413 P54709 P54709 252 259 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 2 0.024687 101.28 By MS/MS 7.5 0.5 1 1 2 2939500 2939500 0 6324 1017 6544 15633;15634 11131 11131 1 68954 0 IDHILDAL NEKLISGKRQELVTKIDHILDAL_______ RQELVTKIDHILDAL_______________ K I D A L - 1 0 0 2 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 8 0 908.49673 P04843 P04843 600 607 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0053588 138.37 By MS/MS 5 0 1 1 4979000 4979000 0 6325 458 6545 15635 11132 11132 1 204660 0 IDILDSALLR FEATKNIKVIMATNRIDILDSALLRPGRID MATNRIDILDSALLRPGRIDRKIEFPPPNE R I D L R P 1 1 0 2 0 0 0 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1127.655 P62195 P62195 298 307 PSMC5 26S protease regulatory subunit 8 yes yes 2 1.968E-07 193.1 By MS/MS 7 0 1 1 344860 344860 0 6326 1117 6546 15636 11133 11133 1 6162.7 0 IDILDSALLRPGR FEATKNIKVIMATNRIDILDSALLRPGRID NRIDILDSALLRPGRIDRKIEFPPPNEEAR R I D G R I 1 2 0 2 0 0 0 1 0 2 3 0 0 0 1 1 0 0 0 0 0 0 13 1 1437.8304 P62195 P62195 298 310 PSMC5 26S protease regulatory subunit 8 yes yes 2;3 0.0003702 167.67 By MS/MS 6.5 0.5 2 2 4 4155400 4155400 0 6327 1117 6547 15637;15638;15639;15640 11134;11135 11135 2 66928 0 IDISPVLLQK AGFVNHFGRSMSVEKIDISPVLLQKGSTKI MSVEKIDISPVLLQKGSTKIALYGLGSIPD K I D Q K G 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 1 0 0 0 1 0 0 10 0 1124.6805 P49959 P49959 162 171 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.00049479 145.17 By MS/MS 5 0 1 1 731900 731900 0 6328 942 6548 15641 11136 11136 1 30084 0 IDISQLVITK VAHAQDVISDLLCNRIDISQLVITKELTRA LLCNRIDISQLVITKELTRAASDYAGKQAH R I D T K E 0 0 0 1 0 1 0 0 0 3 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1128.6754 P28340 P28340 876 885 POLD1 DNA polymerase delta catalytic subunit yes yes 2 7.5465E-30 270.06 By MS/MS 3.5 0.5 1 1 2 722640 722640 0 6329 719 6549 15642;15643 11137 11137 1 19066 0 IDKVNEIVETNRPDSK QELSRFIAAGRLHCKIDKVNEIVETNRPDS DKVNEIVETNRPDSKNWQYQETIKKGDLLL K I D S K N 0 1 2 2 0 0 2 0 0 2 0 2 0 0 1 1 1 0 0 2 0 0 16 2 1855.964 Q15008 Q15008 347 362 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 3;4 0.0036167 104.16 By MS/MS 6.5 0.5 2 2 4 11142000 11142000 0 6330 1460 6550 15644;15645;15646;15647 11138;11139 11138 2 167700 0 IDKWDGSAVK SGLLDKWKIDDKPVKIDKWDGSAVKNSLDD DKPVKIDKWDGSAVKNSLDDSAKKVLLEKY K I D V K N 1 0 0 2 0 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 0 0 10 1 1117.5768 Q15005 Q15005 48 57 SPCS2 Signal peptidase complex subunit 2 yes yes 3 0.039649 73.9 By MS/MS 9 0 1 1 403600 403600 0 6331 1458 6551 15648 11140 11140 1 231630 0 IDLAVLLGK VPLPAENVTITAGQRIDLAVLLGKTPSTME ITAGQRIDLAVLLGKTPSTMENDSSNLDPS R I D G K T 1 0 0 1 0 0 0 1 0 1 3 1 0 0 0 0 0 0 0 1 0 0 9 0 940.59572 Q14157 Q14157 282 290 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 0.00053217 152.63 By MS/MS 3.5 0.5 1 1 2 926800 926800 0 6332 1411 6552 15649;15650 11141 11141 1 24310 0 IDLFDFQR RAWNVLALDGSNWQRIDLFDFQRDIEGRVV DGSNWQRIDLFDFQRDIEGRVVENISKRCG R I D Q R D 0 1 0 2 0 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1052.5291 Q96IG2 Q96IG2 68 75 FBXL20 F-box/LRR-repeat protein 20 yes yes 2 0.0013829 166.68 By MS/MS 7 0 1 1 1127600 1127600 0 6333 2201 6553 15651 11142 11142 1 20150 0 IDLGFGTK VKCTTLIEQQFTYGKIDLGFGTKVADSELC QQFTYGKIDLGFGTKVADSELCKLAADVIL K I D T K V 0 0 0 1 0 0 0 2 0 1 1 1 0 1 0 0 1 0 0 0 0 0 8 0 849.45962 Q8TCG1 Q8TCG1 458 465 KIAA1524 Protein CIP2A yes yes 2 0.021797 104.44 By MS/MS 4.5 0.5 1 1 2 695310 695310 0 6334 1994 6554 15652;15653 11143 11143 1 21370 0 IDLLAQPR SSTSKPPTGRRNISRIDLLAQPRRTRLGSL GRRNISRIDLLAQPRRTRLGSLSARSDSEA R I D P R R 1 1 0 1 0 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 8 0 924.53927 Q5SW79 Q5SW79 1147 1154 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0090507 121.99 By MS/MS 2.5 0.5 1 1 2 1516200 1516200 0 6335 1621 6555 15654;15655 11144 11144 1 66192 0 IDLPAENSNSETIIITGK GGANIKKIREESNTKIDLPAENSNSETIII PAENSNSETIIITGKRANCEAARSRILSIQ K I D G K R 1 0 2 1 0 0 2 1 0 4 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1913.9946 Q00341 Q00341 615 632 HDLBP Vigilin yes yes 2 9.7563E-07 139.66 By MS/MS 3.5 0.5 1 1 2 2130300 2130300 0 6336 1231 6556 15656;15657 11145 11145 1 55975 0 IDLPEYQGEPDEISIQK QILGDKFPCTLVAQKIDLPEYQGEPDEISI LPEYQGEPDEISIQKCQEAVRQVQGPVLVE K I D Q K C 0 0 0 2 0 2 3 1 0 3 1 1 0 0 2 1 0 0 1 0 0 0 17 0 1972.963 Q9BY32 Q9BY32 40 56 ITPA Inosine triphosphate pyrophosphatase yes yes 2 1.03E-06 146.59 By MS/MS 9.5 0.5 1 1 2 2339500 2339500 0 6337 2406 6557 15658;15659 11146 11146 1 1398200 0 IDLTLLNR CNVMLESRFEKMYEKIDLTLLNRLLRLIVD FEKMYEKIDLTLLNRLLRLIVDHNIADYMT K I D N R L 0 1 1 1 0 0 0 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 8 0 956.56548 Q6P2Q9 Q6P2Q9 988 995 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0022231 155.75 By MS/MS 2.5 0.5 1 1 2 509800 509800 0 6338 1706 6558 15660;15661 11147;11148 11148 2 18736 0 IDMVPELLSSNLCSLK ESARRGTTVYLCEKRIDMVPELLSSNLCSL DMVPELLSSNLCSLKCDVDRLAFSCIWEMN R I D L K C 0 0 1 1 1 0 1 0 0 1 4 1 1 0 1 3 0 0 0 1 0 0 16 0 1817.9267 Q9Y2L1 Q9Y2L1 537 552 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.0016583 113.95 By MS/MS 4 0 1 1 269290 269290 0 6339 2892 6559 15662 11149 11149 1663 1 7351.3 0 IDNDGDGFVTTEELK TPDESKERLGKIVDRIDNDGDGFVTTEELK IDNDGDGFVTTEELKTWIKRVQKRYIFDNV R I D L K T 0 0 1 3 0 0 2 2 0 1 1 1 0 1 0 0 2 0 0 1 0 0 15 0 1651.7577 Q15293 Q15293 91 105 RCN1 Reticulocalbin-1 yes yes 2 9.7512E-11 194.06 By MS/MS 7 0 1 1 1062400 1062400 0 6340 1489 6560 15663 11150 11150 1 18985 0 IDPEAFITR AVQSGLWPALLARMKIDPEAFITRHLDQII LLARMKIDPEAFITRHLDQIIPRMTTQSPL K I D T R H 1 1 0 1 0 0 1 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 9 0 1060.5553 Q92616 Q92616 696 704 GCN1L1 Translational activator GCN1 yes yes 2 0.042916 83.783 By MS/MS 2.5 0.5 1 1 2 375320 375320 0 6341 2068 6561 15664;15665 11151 11151 1 16738 0 IDPTVLLGALPLR RGKVPGRAHRDWYHRIDPTVLLGALPLRSL HRIDPTVLLGALPLRSLTRQLVQDENVRGV R I D L R S 1 1 0 1 0 0 0 1 0 1 4 0 0 0 2 0 1 0 0 1 0 0 13 0 1376.8391 Q8WUK0 Q8WUK0 41 53 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.001438 125.97 By MS/MS 9 0 1 1 150890 150890 0 6342 2017 6562 15666 11152;11153 11153 2 86598 0 IDQYQGADAVGLEEK ISATPTFLFFRNKVRIDQYQGADAVGLEEK IDQYQGADAVGLEEKIKQHLENDPGSNEDT R I D E K I 2 0 0 2 0 2 2 2 0 1 1 1 0 0 0 0 0 0 1 1 0 0 15 0 1634.7788 O43396 O43396 88 102 TXNL1 Thioredoxin-like protein 1 yes yes 2 2.1602E-20 217.19 By MS/MS 8 0 1 1 2921100 2921100 0 6343 197 6563 15667 11154 11154 1 192700 0 IDRTDAISEEK DETISNVPILILGNKIDRTDAISEEKLREI LGNKIDRTDAISEEKLREIFGLYGQTTGKG K I D E K L 1 1 0 2 0 0 2 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 11 1 1275.6307 Q9NR31 Q9NR31 136 146 SAR1A GTP-binding protein SAR1a yes yes 2;3 0.012982 123.51 By MS/MS 9 0 2 2 659260 659260 0 6344 2599 6564 15668;15669 11155;11156 11156 2 378350 0 IDSANMNDDITTSLR INSKASLTYAEAQLRIDSANMNDDITTSLR IDSANMNDDITTSLRGLNKLAKILKKRRIE R I D L R G 1 1 2 3 0 0 0 0 0 2 1 0 1 0 0 2 2 0 0 0 0 0 15 0 1664.7676 Q9Y2L1 Q9Y2L1 597 611 DIS3 Exosome complex exonuclease RRP44 yes yes 2 1.2593E-49 272.59 By MS/MS 4 0 1 1 1293900 1293900 0 6345 2892 6565 15670 11157 11157 1 35323 0 IDSGSEVIVGVNK PKLRIEECAARRQARIDSGSEVIVGVNKYQ ARIDSGSEVIVGVNKYQLEKEDAVEVLAID R I D N K Y 0 0 1 1 0 0 1 2 0 2 0 1 0 0 0 2 0 0 0 3 0 0 13 0 1315.6983 P22033 P22033 479 491 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 1.8487E-18 231.42 By MS/MS 3.5 1.5 1 1 2 2387100 2387100 0 6346 653 6566 15671;15672 11158;11159 11159 2 104240 0 IDSIADHVNSAAVNVEEGTK LVTDFSLLVNSQQEKIDSIADHVNSAAVNV DHVNSAAVNVEEGTKNLGKAAKYKLAALPV K I D T K N 3 0 2 2 0 0 2 1 1 2 0 1 0 0 0 2 1 0 0 3 0 0 20 0 2068.0073 P56962 P56962 200 219 STX17 Syntaxin-17 yes yes 3 0.0025511 80.733 By MS/MS 8 0 1 1 1453000 1453000 0 6347 1051 6567 15673 11160 11160 1 95854 0 IDSNLDELSMGLGR DAYPKNPHLRAYHQKIDSNLDELSMGLGRL KIDSNLDELSMGLGRLKDIALGMQTEIEEQ K I D G R L 0 1 1 2 0 0 1 2 0 1 3 0 1 0 0 2 0 0 0 0 0 0 14 0 1518.7348 O95721 O95721 202 215 SNAP29 Synaptosomal-associated protein 29 yes yes 2 1.3014E-05 160.84 By MS/MS 8 0 1 1 619030 619030 0 6348 403 6568 15674 11161 11161 214 1 40838 0 IDTASLGDSTDSYIEVLDGSR HMGPKVFMNCAGFLKIDTASLGDSTDSYIE GDSTDSYIEVLDGSRVHPETYEWARKMAVD K I D S R V 1 1 0 4 0 0 1 2 0 2 2 0 0 0 0 4 2 0 1 1 0 0 21 0 2213.0336 Q7KZ85 Q7KZ85 1037 1057 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.00042397 105.58 By MS/MS 2 0 1 1 135210 135210 0 6349 1756 6569 15675 11162 11162 1 6720.5 0 IDTIEIITDR TEEHHLRDYFEEYGKIDTIEIITDRQSGKK EEYGKIDTIEIITDRQSGKKRGFGFVTFDD K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 P22626 P22626 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.00050813 144.65 By MS/MS 7.5 0.5 1 1 2 1353400 1353400 0 6350 661 6570 15676;15677 11163 11163 1 48833 0 IDTLGLLCESNR ARIKQGLIHQHCQVRIDTLGLLCESNRSTE QVRIDTLGLLCESNRSTEIVSMEEMQWIQF R I D N R S 0 1 1 1 1 0 1 1 0 1 3 0 0 0 0 1 1 0 0 0 0 0 12 0 1389.6922 Q6YHU6 Q6YHU6 639 650 THADA Thyroid adenoma-associated protein yes yes 2 0.0027594 126.03 By MS/MS 3 0 1 1 0 0 0 6351 1737 6571 15678 11164 11164 1 0 0 IDTRNELESYAYSLK DAEKFAEEDKKLKERIDTRNELESYAYSLK IDTRNELESYAYSLKNQIGDKEKLGGKLSS R I D L K N 1 1 1 1 0 0 2 0 0 1 2 1 0 0 0 2 1 0 2 0 0 0 15 1 1800.8894 P11021 P11021 559 573 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.0038379 106.55 By MS/MS 5 0 2 2 4258300 4258300 0 6352 545 6572 15679;15680 11165;11166 11165 2 175040 0 IDVFSPVEFNK DTNLLSNIQKLFSERIDVFSPVEFNKVSVL FSERIDVFSPVEFNKVSVLTGIIKISLKTL R I D N K V 0 0 1 1 0 0 1 0 0 1 0 1 0 2 1 1 0 0 0 2 0 0 11 0 1293.6605 Q9UID3 Q9UID3 686 696 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.00022394 153.97 By MS/MS 5.5 0.5 1 1 2 1287000 1287000 0 6353 2791 6573 15681;15682 11167;11168 11167 2 42337 0 IDVLLDTFR ITGQHRNGVISARTRIDVLLDTFRRKQPFT ISARTRIDVLLDTFRRKQPFTHFLAFFLNE R I D F R R 0 1 0 2 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 0 9 0 1090.6023 Q8N9N2 Q8N9N2 148 156 ASCC1 Activating signal cointegrator 1 complex subunit 1 yes yes 2 0.00154 134.77 By MS/MS 7 0 1 1 248830 248830 0 6354 1937 6574 15683 11169 11169 1 4446.7 0 IDYIAGLDSR IGLLARHLKATHGGRIDYIAGLDSRGFLFG THGGRIDYIAGLDSRGFLFGPSLAQELGLG R I D S R G 1 1 0 2 0 0 0 1 0 2 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1121.5717 P07741 P07741 58 67 APRT Adenine phosphoribosyltransferase yes yes 2 0.0030195 113.93 By MS/MS 8.5 0.5 1 1 2 610020 610020 0 6355 492 6575 15684;15685 11170 11170 1 241820 0 IDYVSSAVR IARADNIFTATERNRIDYVSSAVRIDHAPD ATERNRIDYVSSAVRIDHAPDLPRPEVCFI R I D V R I 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 9 0 1008.524 Q8N3Z3 Q8N3Z3 93 101 GTPBP8 GTP-binding protein 8 yes yes 2 0.017701 98.033 By MS/MS 8.5 0.5 1 1 2 1050700 1050700 0 6356 1912 6576 15686;15687 11171 11171 1 210220 0 IEAACFATIK VMMLRHMGLFDHAARIEAACFATIKDGKSL DHAARIEAACFATIKDGKSLTKDLGGNAKC R I E I K D 3 0 0 0 1 0 1 0 0 2 0 1 0 1 0 0 1 0 0 0 0 0 10 0 1122.5743 P50213 P50213 327 336 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.00048742 145.46 By MS/MS 7.5 0.5 1 1 2 11287000 11287000 0 6357 943 6577 15688;15689 11172 11172 1 308490 0 IEAINQAIANEYEVR KPLLKKPMGPAHWEKIEAINQAIANEYEVR IEAINQAIANEYEVRRKLLIKRLDVTVQSF K I E V R R 3 1 2 0 0 1 3 0 0 3 0 0 0 0 0 0 0 0 1 1 0 0 15 0 1731.8792 Q8NCA5 Q8NCA5 204 218 FAM98A Protein FAM98A yes yes 2 1.2089E-28 243.3 By MS/MS 6 0 1 1 4650300 4650300 0 6358 1952 6578 15690 11173 11173 1 36263 0 IEALLNLPR ESSLQEDEPENDAKKIEALLNLPRNPSVID ENDAKKIEALLNLPRNPSVIDKQDKD____ K I E P R N 1 1 1 0 0 0 1 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 9 0 1037.6233 Q9NPL8 Q9NPL8 266 274 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 0.004042 117.81 By MS/MS 8 0 1 1 982430 982430 0 6359 2583 6579 15691 11174 11174 1 64811 0 IEALQADNDFTNER KIDEMEEKEQELQAKIEALQADNDFTNERL KIEALQADNDFTNERLTALQVRLEHLQEKT K I E E R L 2 1 2 2 0 1 2 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 14 0 1634.7536 Q14BN4 Q14BN4 360 373 SLMAP Sarcolemmal membrane-associated protein yes yes 2 1.1447E-05 167.22 By MS/MS 3.5 0.5 1 1 2 989600 989600 0 6360 1454 6580 15692;15693 11175 11175 1 26617 0 IEANEALVK VGTADEATRAEIQIRIEANEALVKALE___ AEIQIRIEANEALVKALE____________ R I E V K A 2 0 1 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 0 985.54441 P30049 P30049 157 165 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 4.683E-06 174.02 By MS/MS By matching 10 0 2 1 1 13190000 13118000 71383 6361 732 6581 15694;15695 11176 11176 1 13943000 1830900 IEANEALVKALE VGTADEATRAEIQIRIEANEALVKALE___ QIRIEANEALVKALE_______________ R I E L E - 3 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 12 1 1298.7082 P30049 P30049 157 168 ATP5D ATP synthase subunit delta, mitochondrial yes yes 2 0.0002379 169.89 By MS/MS 10 0 1 1 1853900 1853900 0 6362 732 6582 15696 11177 11177 1 1970500 0 IEAVQEFTR TALMLKKRIVVYHPKIEAVQEFTRTLPALV VVYHPKIEAVQEFTRTLPALVWHRQDWTIL K I E T R T 1 1 0 0 0 1 2 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 9 0 1091.5611 Q8TCE6;Q6NSW5 Q8TCE6 190 198 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 2 0.0021432 128.27 By MS/MS 7.5 0.5 1 1 2 1512200 1512200 0 6363 1688 6583 15697;15698 11178 11178 1 40361 0 IEDFLER LDEGKMKLDYILGLKIEDFLERRLQTQVFK LDYILGLKIEDFLERRLQTQVFKLGLAKSI K I E E R R 0 1 0 1 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 920.46035 P46781 P46781 102 108 RPS9 40S ribosomal protein S9 yes yes 2 0.016463 136.11 By MS/MS 8.5 0.5 1 1 2 7554300 7554300 0 6364 887 6584 15699;15700 11179 11179 1 4090200 0 IEDFLERR LDEGKMKLDYILGLKIEDFLERRLQTQVFK DYILGLKIEDFLERRLQTQVFKLGLAKSIH K I E R R L 0 2 0 1 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 1 1076.5615 P46781 P46781 102 109 RPS9 40S ribosomal protein S9 yes yes 2 0.028167 128.61 By MS/MS 9 0 1 1 1718200 1718200 0 6365 887 6585 15701 11180 11180 1 986090 0 IEDLEEGQQVIR KDLMHGLITLMLDSRIEDLEEGQQVIRSVN DSRIEDLEEGQQVIRSVNLLVVKVLEKSDQ R I E I R S 0 1 0 1 0 2 3 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 12 0 1427.7256 Q14008 Q14008 1655 1666 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.2023E-56 304.63 By MS/MS 2.5 0.5 1 1 2 2738300 2738300 0 6366 1405 6586 15702;15703 11181;11182 11181 2 119170 0 IEDLSQQAQLAAAEK KSPASDTYIVFGEAKIEDLSQQAQLAAAEK IEDLSQQAQLAAAEKFKVQGEAVSNIQENT K I E E K F 4 0 0 1 0 3 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 15 0 1613.8261 Q13765;E9PAV3 Q13765 128 142 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 4.1403E-39 269.14 By MS/MS By matching 7.67 0.471 1 2 2 1 6221500 6176600 44913 6367 65 6587 15704;15705;15706 11183;11184 11184 2 224720 383160 IEDPSLLNSR SIFEAAKQELAKLMRIEDPSLLNSRVLLHH AKLMRIEDPSLLNSRVLLHHAKAGTIIARQ R I E S R V 0 1 1 1 0 0 1 0 0 1 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1142.5932 Q8IY17 Q8IY17 518 527 PNPLA6 Neuropathy target esterase yes yes 2 0.00024223 155.06 By MS/MS 3 0 1 1 1176500 1176500 0 6368 1876 6588 15707 11185 11185 1 30711 0 IEDSGKRGNTMAER ______________________________ MIEDSGKRGNTMAERRQLFAEMRAQDLDRI M I E E R R 1 2 1 1 0 0 2 2 0 1 0 1 1 0 0 1 1 0 0 0 0 0 14 2 1562.7471 Q9Y4J8 Q9Y4J8 2 15 DTNA Dystrobrevin alpha yes yes 2 0.012853 63.32 By MS/MS 5 0 1 1 796340 796340 0 6369 2954 6589 15708 11186 11186 1705 1 32733 0 IEDTVFHVFDK PNPQLIYDDEIPSLKIEDTVFHVFDKVKVK PSLKIEDTVFHVFDKVKVKIMLDSSNLQHQ K I E D K V 0 0 0 2 0 0 1 0 1 1 0 1 0 2 0 0 1 0 0 2 0 0 11 0 1348.6663 Q9Y2L1 Q9Y2L1 896 906 DIS3 Exosome complex exonuclease RRP44 yes yes 2;3 9.6484E-05 162.36 By MS/MS 4 0 2 2 1052000 1052000 0 6370 2892 6590 15709;15710 11187;11188 11188 2 28719 0 IEDTVFHVFDKVK PNPQLIYDDEIPSLKIEDTVFHVFDKVKVK LKIEDTVFHVFDKVKVKIMLDSSNLQHQKI K I E V K V 0 0 0 2 0 0 1 0 1 1 0 2 0 2 0 0 1 0 0 3 0 0 13 1 1575.8297 Q9Y2L1 Q9Y2L1 896 908 DIS3 Exosome complex exonuclease RRP44 yes yes 3 0.010785 80.69 By MS/MS 4 0 1 1 0 0 0 6371 2892 6591 15711 11189 11189 1 0 0 IEDVTPIPSDSTR SALRALARSGMKIGRIEDVTPIPSDSTRRK GRIEDVTPIPSDSTRRKGGRRGRRL_____ R I E T R R 0 1 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 13 0 1428.7096 P62263 P62263 129 141 RPS14 40S ribosomal protein S14 yes yes 2 0.00022545 147.62 By MS/MS By matching 10 0 2 1 1 17566000 17258000 308030 6372 1122 6592 15712;15713 11190;11191 11190 2 18343000 7900700 IEDVTPIPSDSTRR SALRALARSGMKIGRIEDVTPIPSDSTRRK RIEDVTPIPSDSTRRKGGRRGRRL______ R I E R R K 0 2 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 14 1 1584.8107 P62263 P62263 129 142 RPS14 40S ribosomal protein S14 yes yes 2 0.0091504 115.23 By MS/MS By matching 10 0 2 1 1 1548400 1509700 38739 6373 1122 6593 15714;15715 11192 11192 1 1604600 993620 IEDYFPEFAR KQDLLAEKVLAGKSKIEDYFPEFARYTTPE AGKSKIEDYFPEFARYTTPEDATPEPGEDP K I E A R Y 1 1 0 1 0 0 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 10 0 1285.5979 P63092;Q5JWF2 P63092 308 317 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.0035704 125.48 By MS/MS 7 0 1 1 1311600 1311600 0 6374 1168 6594 15716 11193 11193 1 23438 0 IEEACEIYAR NSQSFFSGLFGGSSKIEEACEIYARAANMF GGSSKIEEACEIYARAANMFKMAKNWSAAG K I E A R A 2 1 0 0 1 0 3 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 10 0 1252.5758 P54920 P54920 38 47 NAPA Alpha-soluble NSF attachment protein yes yes 2 9.6219E-05 166.07 By MS/MS 8 0 1 1 4606000 4606000 0 6375 1020 6595 15717 11194 11194 1 303850 0 IEECAAR GGMAKAVAEGIPKLRIEECAARRQARIDSG AEGIPKLRIEECAARRQARIDSGSEVIVGV R I E A R R 2 1 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 7 0 847.3858 P22033 P22033 468 474 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.045203 104.45 By MS/MS 2 0 1 1 277410 277410 0 6376 653 6596 15718 11195 11195 1 13789 0 IEEELGSK PCRSERLAKYNQLLRIEEELGSKAKFAGRN KYNQLLRIEEELGSKAKFAGRNFRNPLAK_ R I E S K A 0 0 0 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 903.45493 P06733 P06733 413 420 ENO1 Alpha-enolase yes yes 2 0.01563 112.41 By MS/MS 6 0 1 1 6775100 6775100 0 6377 482 6597 15719 11196 11196 1 52832 0 IEEFVYEKLDR MKQTEVLLQPNPNARIEEFVYEKLDRKAPS PNARIEEFVYEKLDRKAPSRINNPELLGQY R I E D R K 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 Q9Y371 Q9Y371 75 85 SH3GLB1 Endophilin-B1 yes yes 2 0.034426 119.34 By MS/MS 7 0 1 1 1069700 1069700 0 6378 2914 6598 15720 11197 11197 1 19116 0 IEEGHIGVYYR ASSFFCASLFSAVHKIEEGHIGVYYRGGAL AVHKIEEGHIGVYYRGGALLTSTSGPGFHL K I E Y R G 0 1 0 0 0 0 2 2 1 2 0 0 0 0 0 0 0 0 2 1 0 0 11 0 1334.6619 O94905 O94905 26 36 ERLIN2 Erlin-2 yes yes 2 0.0021375 119.75 By MS/MS 7 0 1 1 866170 866170 0 6379 357 6599 15721 11198 11198 1 15479 0 IEEIKDFLLTAR ______________________________ PRKIEEIKDFLLTARRKDAKSVKIKKNKDN K I E A R R 1 1 0 1 0 0 2 0 0 2 2 1 0 1 0 0 1 0 0 0 0 0 12 1 1446.8082 P63173 P63173 5 16 RPL38 60S ribosomal protein L38 yes yes 3 0.0013099 116.71 By MS/MS 10 0 1 1 141390 141390 0 6380 1173 6600 15722 11199 11199 1 150280 0 IEELFSIVR CHVQRFFYRIYASLRIEELFSIVRDFPDSR IYASLRIEELFSIVRDFPDSRPAIEDLKYC R I E V R D 0 1 0 0 0 0 2 0 0 2 1 0 0 1 0 1 0 0 0 1 0 0 9 0 1104.6179 Q9UJX6 Q9UJX6 341 349 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 3.9247E-08 204.62 By MS/MS 4.5 0.5 1 1 2 740180 740180 0 6381 2805 6601 15723;15724 11200 11200 1 20896 0 IEELQLIVNDK EGKAGSGLRQYYLSKIEELQLIVNDKSQNL YLSKIEELQLIVNDKSQNLRRLQAQRNELN K I E D K S 0 0 1 1 0 1 2 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1312.7238 P62195 P62195 28 38 PSMC5 26S protease regulatory subunit 8 yes yes 2 9.5769E-12 213.35 By MS/MS 7 0.816 1 1 1 3 8143000 8143000 0 6382 1117 6602 15725;15726;15727 11201 11201 1 149680 0 IEEQEEQR DQGPKTIEQIHKEAKIEEQEEQRKVQQLMT QIHKEAKIEEQEEQRKVQQLMTKEKRRPGV K I E Q R K 0 1 0 0 0 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1059.4833 O43432 O43432 1005 1012 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00080773 175.91 By MS/MS 2 0 1 1 693710 693710 0 6383 200 6603 15728 11202 11202 1 34481 0 IEEQEEQRK DQGPKTIEQIHKEAKIEEQEEQRKVQQLMT IHKEAKIEEQEEQRKVQQLMTKEKRRPGVQ K I E R K V 0 1 0 0 0 2 4 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 9 1 1187.5782 O43432 O43432 1005 1013 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.053993 119.21 By MS/MS 2 0 1 1 0 0 0 6384 200 6604 15729 11203 11203 1 0 0 IEESDQGPYAIILAPTR IPLLVWITTLPKIDRIEESDQGPYAIILAP ESDQGPYAIILAPTRELAQQIEEETIKFGK R I E T R E 2 1 0 1 0 1 2 1 0 3 1 0 0 0 2 1 1 0 1 0 0 0 17 0 1871.9629 Q9BUQ8 Q9BUQ8 462 478 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 2 3.639E-11 174.47 By MS/MS 4 0.816 1 1 1 3 406580 406580 0 6385 2366 6605 15730;15731;15732 11204 11204 1 11914 0 IEESIDR TDYAIARRIVDLHSRIEESIDRVYSLDDIR RIVDLHSRIEESIDRVYSLDDIRRYLLFAR R I E D R V 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 7 0 860.42396 Q14566 Q14566 559 565 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.050256 101.28 By MS/MS 4 0 1 1 482810 482810 0 6386 1436 6606 15733 11205 11205 1 13180 0 IEEVPELPLVVEDK AASALPALVMSKGHRIEEVPELPLVVEDKV RIEEVPELPLVVEDKVEGYKKTKEAVLLLK R I E D K V 0 0 0 1 0 0 4 0 0 1 2 1 0 0 2 0 0 0 0 3 0 0 14 0 1607.8658 P36578 P36578 144 157 RPL4 60S ribosomal protein L4 yes yes 2 0.00090659 125.23 By MS/MS 7 0 1 1 501930 501930 0 6387 808 6607 15734 11206 11206 1 8969.7 0 IEEVSDTSSLQPQASLK DLFPTSDTPRAKVLKIEEVSDTSSLQPQAS EVSDTSSLQPQASLKQDVCQSYSEKMPIEI K I E L K Q 1 0 0 1 0 2 2 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 17 0 1830.9211 Q9H6T3 Q9H6T3 499 515 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 1.882E-43 261.41 By MS/MS 5 0 1 1 1161900 1161900 0 6388 2512 6608 15735 11207 11207 1 47760 0 IEEVVER EEIFGPVQPLFKFKKIEEVVERANNTRYGL QPLFKFKKIEEVVERANNTRYGLAAAVFTR K I E E R A 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 872.46035 P30837 P30837 430 436 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.050113 101.33 By MS/MS By matching 6.75 0.829 2 1 1 3 1 3756300 3743300 13056 6389 747 6609 15736;15737;15738;15739 11208 11208 1 69671 40041 IEFAVAEGAK SPLELRMEELRHHFRIEFAVAEGAKNVMKL RHHFRIEFAVAEGAKNVMKLLGSGKVTDRK R I E A K N 3 0 0 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 10 0 1033.5444 Q16513 Q16513 228 237 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.032734 83.499 By MS/MS 3.5 0.5 1 1 2 1025100 1025100 0 6390 1535 6610 15740;15741 11209 11209 1 27205 0 IEFSLPDLEGR TLDPALMRPGRLDRKIEFSLPDLEGRTHIF LDRKIEFSLPDLEGRTHIFKIHARSMSVER K I E G R T 0 1 0 1 0 0 2 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1274.6507 P35998 P35998 341 351 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.0048533 128.27 By MS/MS 7.5 0.5 1 1 2 1521400 1521400 0 6391 801 6611 15742;15743 11210;11211 11210 2 27187 0 IEGDETSTEAATR RADQFEYVMYGKVYRIEGDETSTEAATRLS YRIEGDETSTEAATRLSAYVSYGGLLMRLQ R I E T R L 2 1 0 1 0 0 3 1 0 1 0 0 0 0 0 1 3 0 0 0 0 0 13 0 1378.6212 P52434 P52434 99 111 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 2 2.649E-05 167.11 By MS/MS 10 0 1 1 246320 246320 0 6392 986 6612 15744 11212 11212 1 261810 0 IEGDPQGVQQAK SVRIPPDSEKSNLIRIEGDPQGVQQAKREL LIRIEGDPQGVQQAKRELLELASRMENERT R I E A K R 1 0 0 1 0 3 1 2 0 1 0 1 0 0 1 0 0 0 0 1 0 0 12 0 1268.6361 Q00341 Q00341 483 494 HDLBP Vigilin yes yes 2 6.0733E-05 163.66 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 8098300 8098300 0 6393 1231 6613 15745;15746;15747;15748;15749;15750 11213;11214 11213 2 206540 0 IEGENYLPQPIYR EEYMRVISQRYPDIRIEGENYLPQPIYRHI IRIEGENYLPQPIYRHIASFLSVFKLVLIG R I E Y R H 0 1 1 0 0 1 2 1 0 2 1 0 0 0 2 0 0 0 2 0 0 0 13 0 1590.8042 P62341 P62341 71 83 SELT Selenoprotein T yes yes 2 0.00014275 152.54 By MS/MS 9.5 0.5 1 1 2 773700 773700 0 6394 1134 6614 15751;15752 11215;11216 11216 2 674120 0 IEGLLAAFPK KAIVSRQFVEMTRTRIEGLLAAFPKLMNTG MTRTRIEGLLAAFPKLMNTGKQHTFVETES R I E P K L 2 0 0 0 0 0 1 1 0 1 2 1 0 1 1 0 0 0 0 0 0 0 10 0 1057.6172 P48444 P48444 29 38 ARCN1 Coatomer subunit delta yes yes 2 0.0010075 122.52 By MS/MS 5.4 2.42 1 1 1 1 1 5 6419400 6419400 0 6395 903 6615 15753;15754;15755;15756;15757 11217;11218 11218 2 63634 0 IEGSGDQVDTLELSGGAR LLQMVQQFGVDFEKRIEGSGDQVDTLELSG SGDQVDTLELSGGARINRIFHERFPFELVK R I E A R I 1 1 0 2 0 1 2 4 0 1 2 0 0 0 0 2 1 0 0 1 0 0 18 0 1802.8646 P50570 P50570 344 361 DNM2 Dynamin-2 yes yes 2 1.8664E-43 253.97 By MS/MS 4.5 0.5 1 1 2 2422000 2422000 0 6396 949 6616 15758;15759 11219 11219 1 69882 0 IEGTPLETIQK HGHHKMELPDYRQWKIEGTPLETIQKKLAA RQWKIEGTPLETIQKKLAAKGLRDPWGRNE K I E Q K K 0 0 0 0 0 1 2 1 0 2 1 1 0 0 1 0 2 0 0 0 0 0 11 0 1227.6711 O43676 O43676 24 34 NDUFB3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 yes yes 2 0.0057884 104.42 By MS/MS 9 0.816 1 1 1 3 1185800 1185800 0 6397 212 6617 15760;15761;15762 11220 11220 1 786330 0 IEGVLLLGEPVR RRLKTTPLPRNDFPRIEGVLLLGEPVRWET FPRIEGVLLLGEPVRWETSLQLIMDVLLSN R I E V R W 0 1 0 0 0 0 2 2 0 1 3 0 0 0 1 0 0 0 0 2 0 0 12 0 1293.7656 Q9BXW7 Q9BXW7 189 200 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 3.2479E-07 185.96 By MS/MS 7.5 1.12 1 1 1 1 4 49561000 49561000 0 6398 2404 6618 15763;15764;15765;15766 11221;11222;11223 11221 3 1013000 0 IEHQTITTPSK CILRELYGVGVEKLRIEHQTITTPSKKKIE EKLRIEHQTITTPSKKKIEISTIASNYHLE R I E S K K 0 0 0 0 0 1 1 0 1 2 0 1 0 0 1 1 3 0 0 0 0 0 11 0 1253.6616 P40938 P40938 69 79 RFC3 Replication factor C subunit 3 yes yes 3 0.002444 98.182 By MS/MS 7 0 1 1 804630 804630 0 6399 834 6619 15767 11224 11224 1 14379 0 IEHSKLLE REFTQGVKPDWTIARIEHSKLLE_______ PDWTIARIEHSKLLE_______________ R I E L E - 0 0 0 0 0 0 2 0 1 1 2 1 0 0 0 1 0 0 0 0 0 0 8 1 967.53385 Q8WWC4 Q8WWC4 284 291 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2;3 0.023938 124.08 By MS/MS 9 0 2 2 874320 874320 0 6400 2037 6620 15768;15769 11225;11226 11226 2 501780 0 IEILAPPNGSVPGDR VLSQAMVMCASSPEKIEILAPPNGSVPGDR IEILAPPNGSVPGDRITFDAFPGEPDKELN K I E D R I 1 1 1 1 0 0 1 2 0 2 1 0 0 0 3 1 0 0 0 1 0 0 15 0 1533.8151 Q12904 Q12904 236 250 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 0.018198 93.649 By MS/MS 7.5 1.12 1 1 1 1 4 2863300 2863300 0 6401 1313 6621 15770;15771;15772;15773 11227 11227 1 168090 0 IEISELNR QITAGRHGDSVRNSKIEISELNRVIQRLRS DSVRNSKIEISELNRVIQRLRSEIDNVKKQ K I E N R V 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 8 0 972.52401 P04264;CON__P04264;CON__P35908v2;CON__P35908;P35908 P04264 396 403 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal no no 2 0.00011127 193.86 By MS/MS By MS/MS 4.88 2.78 2 2 2 2 2 1 1 2 1 1 8 8 30537000 18497000 12039000 + 6402 450;45;52 6622 15774;15775;15776;15777;15778;15779;15780;15781;15782;15783;15784;15785;15786;15787;15788;15789 11228;11229;11230;11231;11232;11233;11234;11235;11236;11237;11238;11239;11240;11241;11242 11238 15 5618600 26803000 IEISSPCCPR RPISSCSQRRGPKCRIEISSPCCPRQVPPQ GPKCRIEISSPCCPRQVPPQRCPVEIPPIR R I E P R Q 0 1 0 0 2 0 1 0 0 2 0 0 0 0 2 2 0 0 0 0 0 0 10 0 1217.5533 Q5T749 Q5T749 327 336 KPRP Keratinocyte proline-rich protein yes yes 2 0.00067206 138.06 By MS/MS 5.5 0.5 1 1 2 361120 0 361120 6403 1631 6623 15790;15791 11243;11244 11243 2 0 1082600 IEITSLLPSR SVISSWLSTDPAKDRIEITSLLPSRSLSVN PAKDRIEITSLLPSRSLSVNTLDVLGPCLV R I E S R S 0 1 0 0 0 0 1 0 0 2 2 0 0 0 1 2 1 0 0 0 0 0 10 0 1127.655 Q8NFH3 Q8NFH3 340 349 NUP43 Nucleoporin Nup43 yes yes 2 0.0001219 163.16 By MS/MS 7 0 1 1 329440 329440 0 6404 1971 6624 15792 11245 11245 1 5887.2 0 IEIVVVGTGDR ITEDSFSLFWLLEPRIEIVVVGTGDRTERL LEPRIEIVVVGTGDRTERLQSQVLQAMRQR R I E D R T 0 1 0 1 0 0 1 2 0 2 0 0 0 0 0 0 1 0 0 3 0 0 11 0 1156.6452 Q9BU61 Q9BU61 112 122 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 1.5513E-10 197.21 By MS/MS 10 0 1 1 2607500 2607500 0 6405 2360 6625 15793 11246 11246 1 2771500 0 IEIVVVGTGDRTER ITEDSFSLFWLLEPRIEIVVVGTGDRTERL RIEIVVVGTGDRTERLQSQVLQAMRQRGIA R I E E R L 0 2 0 1 0 0 2 2 0 2 0 0 0 0 0 0 2 0 0 3 0 0 14 1 1542.8366 Q9BU61 Q9BU61 112 125 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 9.852E-05 165.63 By MS/MS 10 0 1 1 678250 678250 0 6406 2360 6626 15794 11247 11247 1 720910 0 IEKEIQQK MAERKGTAKVDFLKKIEKEIQQKWDTERVF KVDFLKKIEKEIQQKWDTERVFEVNASNLE K I E Q K W 0 0 0 0 0 2 2 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 8 1 1014.571 Q9P2J5 Q9P2J5 16 23 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0048445 167.23 By MS/MS 3 0 1 1 422680 422680 0 6407 2738 6627 15795 11248 11248 1 11034 0 IEKHPEAANLLLR ETLQKLVLLGVDLSKIEKHPEAANLLLRLD SKIEKHPEAANLLLRLDFEKDIKQMLLFLK K I E L R L 2 1 1 0 0 0 2 0 1 1 3 1 0 0 1 0 0 0 0 0 0 0 13 1 1502.8569 Q96E29 Q96E29 169 181 MTERF3 Transcription termination factor 3, mitochondrial yes yes 3 0.011256 80.905 By MS/MS 7 0 1 1 1186400 1186400 0 6408 2158 6628 15796 11249 11249 1 21201 0 IEKIGEGTYGVVYK ______________________________ KIEKIGEGTYGVVYKGRHKTTGQVVAMKKI K I E Y K G 0 0 0 0 0 0 2 3 0 2 0 2 0 0 0 0 1 0 2 2 0 0 14 1 1554.8294 P06493 P06493 7 20 CDK1 Cyclin-dependent kinase 1 yes yes 3 0.00042355 124.81 By MS/MS 8 0 1 1 1164600 1164600 0 6409 477 6629 15797 11250 11250 1 76832 0 IEKLEEYITTSK KIKQKLREIEENQKRIEKLEEYITTSKQSL QKRIEKLEEYITTSKQSLEEQKKLEGELTE R I E S K Q 0 0 0 0 0 0 3 0 0 2 1 2 0 0 0 1 2 0 1 0 0 0 12 1 1452.7712 Q14683 Q14683 435 446 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 9.722E-05 174.05 By MS/MS 3.33 0.471 2 1 3 3514400 3514400 0 6410 1440 6630 15798;15799;15800 11251;11252 11251 2 91858 0 IELEETIK VTDPRVVDLLVIKGKIELEETIKVWKQRTH LLVIKGKIELEETIKVWKQRTHVMRFFHET K I E I K V 0 0 0 0 0 0 3 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 8 0 973.53318 P56556 P56556 88 95 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 2 0.0053588 135.77 By MS/MS 10 0 1 1 1072600 1072600 0 6411 1048 6631 15801 11253 11253 1 1140000 0 IELFADVVPK FFDVSIGGQEVGRMKIELFADVVPKTAENF VGRMKIELFADVVPKTAENFRQFCTGEFRK K I E P K T 1 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 0 0 2 0 0 10 0 1129.6383 O43447 O43447 29 38 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.011847 98.033 By MS/MS 10 0 1 1 124050 124050 0 6412 201 6632 15802 11254 11254 1 131850 0 IELFCTEYQNNK TLSTYLEDCKFDRERIELFCTEYQNNKNSL RERIELFCTEYQNNKNSLEILLGSIGRSLP R I E N K N 0 0 2 0 1 1 2 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 12 0 1557.7133 Q9UBI1 Q9UBI1 97 108 COMMD3 COMM domain-containing protein 3 yes yes 2 0.00028728 148.56 By MS/MS 9 0 1 1 266440 266440 0 6413 2750 6633 15803 11255 11255 1 152910 0 IELLGSYDPQK DLNRKSNQVKTCKAKIELLGSYDPQKQLII CKAKIELLGSYDPQKQLIIEDPYYGNDSDF K I E Q K Q 0 0 0 1 0 1 1 1 0 1 2 1 0 0 1 1 0 0 1 0 0 0 11 0 1261.6554 P24666 P24666 114 124 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 3.0983E-07 212.03 By MS/MS 10 0 1 1 0 0 0 6414 679 6634 15804 11256 11256 1 0 0 IELLIDAAR EAVCRGCVNFEGADRIELLIDAARQLKRSH FEGADRIELLIDAARQLKRSHVLPEGRSPG R I E A R Q 2 1 0 1 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5917 Q8IU81 Q8IU81 45 53 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.014974 107.15 By MS/MS 5 0 1 1 0 0 0 6415 1852 6635 15805 11257 11257 1 0 0 IELPELFDR ARGLFKDFFPETGTKIELPELFDRGTASFP PETGTKIELPELFDRGTASFPQTIYCGFDP K I E D R G 0 1 0 1 0 0 2 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 9 0 1130.5972 Q9Y2Z4 Q9Y2Z4 59 67 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 0.010578 103.55 By MS/MS 7 0.816 1 1 1 3 11593000 11593000 0 6416 2909 6636 15806;15807;15808 11258;11259 11259 2 215700 0 IELYDCQQITR DASLEHLKSCHSLERIELYDCQQITRAGIK SLERIELYDCQQITRAGIKRLRTHLPNIKV R I E T R A 0 1 0 1 1 2 1 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 0 1437.6922 Q96IG2 Q96IG2 384 394 FBXL20 F-box/LRR-repeat protein 20 yes yes 2 0.0001651 167.12 By MS/MS 7 0 1 1 954880 954880 0 6417 2201 6637 15809 11260 11260 1 17064 0 IENHEGVR KVLGEKGKNIKIISKIENHEGVRRFDEILE NIKIISKIENHEGVRRFDEILEASDGIMVA K I E V R R 0 1 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 952.47264 P14618 P14618 271 278 PKM Pyruvate kinase PKM yes yes 2 0.0066196 131.06 By MS/MS By matching 3.6 2.06 1 1 1 2 4 1 12391000 12370000 21021 6418 588 6638 15810;15811;15812;15813;15814 11261;11262 11262 2 113340 64471 IENVETLVLQAPK LPSELERQEDQGCVRIENVETLVLQAPKDS VRIENVETLVLQAPKDSFALKSNERGIGQA R I E P K D 1 0 1 0 0 1 2 0 0 1 2 1 0 0 1 0 1 0 0 2 0 0 13 0 1452.8188 O95235 O95235 90 102 KIF20A Kinesin-like protein KIF20A yes yes 2 1.2972E-11 199.12 By MS/MS 4 0 1 1 374040 374040 0 6419 377 6639 15815 11263 11263 1 10211 0 IEQEFLTEALPVK PSEERVREIIINAVRIEQEFLTEALPVKLI VRIEQEFLTEALPVKLIGMNCTLMKQYIEF R I E V K L 1 0 0 0 0 1 3 0 0 1 2 1 0 1 1 0 1 0 0 1 0 0 13 0 1515.8185 P31350 P31350 299 311 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 2 2.5749E-12 211.37 By MS/MS 7.5 0.5 1 1 2 1630400 1630400 0 6420 753 6640 15816;15817 11264 11264 1 34337 0 IEQVIVAEPGAVLLYK VGHITEGVCRPLKVRIEQVIVAEPGAVLLY EQVIVAEPGAVLLYKISNLLKFYHHTISGI R I E Y K I 2 0 0 0 0 1 2 1 0 2 2 1 0 0 1 0 0 0 1 3 0 0 16 0 1741.0026 Q9Y2V7 Q9Y2V7 361 376 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 1.6018E-07 165.51 By MS/MS 5 0 1 1 675860 675860 0 6421 2903 6641 15818 11265 11265 1 27781 0 IESEGLLSLTTQLVK ERFKALHSKLQALGKIESEGLLSLTTQLVK IESEGLLSLTTQLVKEKLSTCEAEDIATYE K I E V K E 0 0 0 0 0 1 2 1 0 1 4 1 0 0 0 2 2 0 0 1 0 0 15 0 1629.9189 Q92552 Q92552 347 361 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 3.1623E-12 159.99 By MS/MS 7 0 1 1 0 0 0 6422 2059 6642 15819 11266 11266 1 0 0 IESILMSLPLTAR YDRGTKFGLFTPGSRIESILMSLPLTARWE SRIESILMSLPLTARWEYMHSPSENSKEAE R I E A R W 1 1 0 0 0 0 1 0 0 2 3 0 1 0 1 2 1 0 0 0 0 0 13 0 1442.8167 P36551 P36551 414 426 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 2 1.2198E-17 215.87 By MS/MS 7.5 0.5 1 1 2 424490 424490 0 6423 807 6643 15820;15821 11267;11268 11268 553 2 22155 0 IESPEEISLLPK IPRYRFQSNHMDMVRIESPEEISLLPKTSW MVRIESPEEISLLPKTSWNIPQPGEGDVRE R I E P K T 0 0 0 0 0 0 3 0 0 2 2 1 0 0 2 2 0 0 0 0 0 0 12 0 1353.7391 P49914 P49914 95 106 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 2 0.00023067 151.22 By MS/MS 8.5 0.5 1 1 2 624350 624350 0 6424 939 6644 15822;15823 11269;11270 11270 2 208830 0 IETLDPALIRPGR FDSRGDVKVIMATNRIETLDPALIRPGRID NRIETLDPALIRPGRIDRKIEFPLPDEKTK R I E G R I 1 2 0 1 0 0 1 1 0 2 2 0 0 0 2 0 1 0 0 0 0 0 13 1 1449.8304 P62191 P62191 334 346 PSMC1 26S protease regulatory subunit 4 yes yes 3 0.038935 62.408 By MS/MS 7 0.816 1 1 1 3 8268100 8268100 0 6425 1116 6645 15824;15825;15826 11271 11271 1 87830 0 IETMLGDVAVAVHPK QGSDSDEEVVVATTRIETMLGDVAVAVHPK IETMLGDVAVAVHPKDTRYQHLKGKNVIHP R I E P K D 2 0 0 1 0 0 1 1 1 1 1 1 1 0 1 0 1 0 0 3 0 0 15 0 1578.844 P26640 P26640 538 552 VARS Valine--tRNA ligase yes yes 3 0.010169 83.243 By MS/MS 3.5 0.5 1 1 2 1462000 1462000 0 6426 699 6646 15827;15828 11272 11272 469 1 38545 0 IEVIEIMTDR TEEHHLRDYFEQYGKIEVIEIMTDRGSGKK EQYGKIEVIEIMTDRGSGKKRGFAFVTFDD K I E D R G 0 1 0 1 0 0 2 0 0 3 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1217.6326 P09651;Q32P51 P09651 131 140 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.0088426 104.22 By MS/MS 8 0 1 1 0 0 0 6427 519 6647 15829 11273 11273 1 0 0 IEVIKPGDLGVDLTSK RYATLPNIMKAKKKKIEVIKPGDLGVDLTS EVIKPGDLGVDLTSKLSVISVEDPPQRTAG K I E S K L 0 0 0 2 0 0 1 2 0 2 2 2 0 0 1 1 1 0 0 2 0 0 16 1 1682.9455 P38117 P38117 206 221 ETFB Electron transfer flavoprotein subunit beta yes yes 3 0.012745 91.355 By MS/MS 8 0 1 1 1796400 1796400 0 6428 816 6648 15830 11274 11274 1 118510 0 IEVLDSLQSK TRENLEQEIAAMNKKIEVLDSLQSKAKLLR AMNKKIEVLDSLQSKAKLLRNKAGWLDSEL K I E S K A 0 0 0 1 0 1 1 0 0 1 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1130.6183 O95140 O95140 721 730 MFN2 Mitofusin-2 yes yes 2 0.0060348 112.3 By MS/MS 5 0 1 1 955710 955710 0 6429 366 6649 15831 11275 11275 1 39284 0 IEVLEEELR EMLKSLEDLKLKNTKIEVLEEELRLARDAN KLKNTKIEVLEEELRLARDANSENCNKNKF K I E L R L 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1128.6027 P15924 P15924 1034 1042 DSP Desmoplakin yes yes 2 0.00056798 158.87 By MS/MS By MS/MS 3.33 1.11 2 1 2 1 4 2 2229100 2031700 197340 6430 603 6650 15832;15833;15834;15835;15836;15837 11276;11277;11278;11279 11279 4 79003 316170 IEVQDTSGGTTALRPSASTQALSSSVSSSK CYQEVSQCFGVLSSRIEVQDTSGGTTALRP SASTQALSSSVSSSKLFSSSTAPHETSFGE R I E S K L 3 1 0 1 0 2 1 2 0 1 2 1 0 0 1 9 4 0 0 2 0 0 30 1 2951.4684 Q16531 Q16531 740 769 DDB1 DNA damage-binding protein 1 yes yes 3 3.3282E-11 101.98 By MS/MS 3 0.816 1 1 1 3 2339500 2339500 0 6431 1537 6651 15838;15839;15840 11280;11281;11282 11282 3 70930 0 IEYQFFEDR KVDALLSAQPKGDPRIEYQFFEDRHSAIKL PKGDPRIEYQFFEDRHSAIKLRPKEGETYF R I E D R H 0 1 0 1 0 1 2 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 9 0 1245.5666 Q9NYU2 Q9NYU2 964 972 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 0.0016829 133.23 By MS/MS 3.5 0.5 1 1 2 1575900 1575900 0 6432 2699 6652 15841;15842 11283 11283 1 41496 0 IEYVTVTPEGFR PGKFLLGYQPRGKPRIEYVTVTPEGFRYRG KPRIEYVTVTPEGFRYRGQIFPTVNGLFRW R I E F R Y 0 1 0 0 0 0 2 1 0 1 0 0 0 1 1 0 2 0 1 2 0 0 12 0 1409.7191 Q7KZ85 Q7KZ85 1484 1495 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.0045414 108.43 By MS/MS 2.5 0.5 1 1 2 468420 468420 0 6433 1756 6653 15843;15844 11284 11284 1 20216 0 IFANTPDSGCVLGMR NWMSGKIKESYRNGRIFANTPDSGCVLGMR IFANTPDSGCVLGMRKRALVFQPVAELKDQ R I F M R K 1 1 1 1 1 0 0 2 0 1 1 0 1 1 1 1 1 0 0 1 0 0 15 0 1636.7701 P08237 P08237 700 714 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 0.01751 92.611 By MS/MS 5 0 1 1 1305400 1305400 0 6434 500 6654 15845 11285 11285 299 0 53657 0 IFDAAKAPIQWEER PGDGIGPEISAAVMKIFDAAKAPIQWEERN KIFDAAKAPIQWEERNVTAIQGPGGKWMIP K I F E R N 3 1 0 1 0 1 2 0 0 2 0 1 0 1 1 0 0 1 0 0 0 0 14 1 1672.8573 P50213 P50213 53 66 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 3 0.0082425 82.55 By MS/MS 7.5 0.5 1 1 2 1643400 1643400 0 6435 943 6655 15846;15847 11286 11286 1 53281 0 IFDAVGFTFPNR KAVKAGDIDAKTRRRIFDAVGFTFPNRLLT RRRIFDAVGFTFPNRLLTTKEAPDGCPDHV R I F N R L 1 1 1 1 0 0 0 1 0 1 0 0 0 3 1 0 1 0 0 1 0 0 12 0 1382.6983 Q9UBB6 Q9UBB6 76 87 NCDN Neurochondrin yes yes 2 0.00017202 153.97 By MS/MS 5 0 1 1 197320 197320 0 6436 2745 6656 15848 11287 11287 1 8110.6 0 IFDEILVNAADNK GINYREVTFVPGLYKIFDEILVNAADNKQR YKIFDEILVNAADNKQRDPKMSCIRVTIDP K I F N K Q 2 0 2 2 0 0 1 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 13 0 1460.7511 P11388;Q02880 P11388 84 96 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 2 0.00020592 148.78 By MS/MS 3 0.816 1 1 1 3 1509700 1509700 0 6437 553;1258 6657 15849;15850;15851 11288 11288 1 41402 0 IFDIDEAEEGVK LNFFNQKKKKKKTKKIFDIDEAEEGVKDLK TKKIFDIDEAEEGVKDLKIESDVQEPTEPE K I F V K D 1 0 0 2 0 0 3 1 0 2 0 1 0 1 0 0 0 0 0 1 0 0 12 0 1363.6507 P20042 P20042 88 99 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.6931E-07 190.57 By MS/MS By matching 6 0 2 1 1 5507700 5481700 25937 6438 638 6658 15852;15853 11289 11289 1 42747 79545 IFDLQDWTQEDER AKINFDSNSAYRQKKIFDLQDWTQEDERDK KKIFDLQDWTQEDERDKDAAKANLNYIGLD K I F E R D 0 1 0 3 0 2 2 0 0 1 1 0 0 1 0 0 1 1 0 0 0 0 13 0 1693.7584 Q9P2R7 Q9P2R7 288 300 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.00029402 143.55 By MS/MS 7 0 1 1 386760 386760 0 6439 2741 6659 15854 11290 11290 1 6911.4 0 IFDLQDWTQEDERDKDAAK AKINFDSNSAYRQKKIFDLQDWTQEDERDK QDWTQEDERDKDAAKANLNYIGLDGNIGCL K I F A K A 2 1 0 5 0 2 2 0 0 1 1 2 0 1 0 0 1 1 0 0 0 0 19 2 2322.0764 Q9P2R7 Q9P2R7 288 306 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 3 0.0032056 85.563 By MS/MS 7 0 1 1 1828300 1828300 0 6440 2741 6660 15855 11291 11291 1 32672 0 IFDPSPEDIAR ERFLAPYGRQDLHLRIFDPSPEDIARADNI LHLRIFDPSPEDIARADNIFTATERNRIDY R I F A R A 1 1 0 2 0 0 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 0 11 0 1258.6194 Q8N3Z3 Q8N3Z3 70 80 GTPBP8 GTP-binding protein 8 yes yes 2 0.0011519 131.62 By MS/MS 8.5 1.12 1 1 1 1 4 9286200 9286200 0 6441 1912 6661 15856;15857;15858;15859 11292 11292 1 727700 0 IFDTYVGAQR KWLLRQMTGKCELQRIFDTYVGAQRTHRIE CELQRIFDTYVGAQRTHRIENSLTYSKNKV R I F Q R T 1 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 1 0 0 10 0 1168.5877 Q8IZ81 Q8IZ81 34 43 ELMOD2 ELMO domain-containing protein 2 yes yes 2 0.00020929 156.35 By MS/MS 8 0 1 1 928000 928000 0 6442 1885 6662 15860 11293 11293 1 61220 0 IFEGTNDILR EPGVERVLRDLRIFRIFEGTNDILRLFVAL LRIFRIFEGTNDILRLFVALQGCMDKGKEL R I F L R L 0 1 1 1 0 0 1 1 0 2 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1176.6139 P49748 P49748 460 469 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00011556 163.88 By MS/MS 5.5 0.5 1 1 2 2138500 2138500 0 6443 929 6663 15861;15862 11294 11294 1 58431 0 IFEMGPVFTL NHSFMPIVLELIPLKIFEMGPVFTL_____ LIPLKIFEMGPVFTL_______________ K I F T L - 0 0 0 0 0 0 1 1 0 1 1 0 1 2 1 0 1 0 0 1 0 0 10 0 1152.5889 P00403 P00403 218 227 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 0.023966 82.452 By MS/MS 9.5 0.5 1 1 2 660090 660090 0 6444 428 6664 15863;15864 11295 11295 226 1 388280 0 IFEPILGEGR TQYYLEQQLAKPLLRIFEPILGEGRAEAVL KPLLRIFEPILGEGRAEAVLLRGDHTRCKT R I F G R A 0 1 0 0 0 0 2 2 0 2 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1129.6132 P28340 P28340 969 978 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.00075438 134.25 By MS/MS 3.5 0.5 1 1 2 2488300 2488300 0 6445 719 6665 15865;15866 11296 11296 1 65528 0 IFETVNSVR IVARDEVDSLMCEKRIFETVNSVRHPFLVN LMCEKRIFETVNSVRHPFLVNLFACFQTKE R I F V R H 0 1 1 0 0 0 1 0 0 1 0 0 0 1 0 1 1 0 0 2 0 0 9 0 1063.5662 Q16513 Q16513 708 716 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0098104 112.11 By MS/MS 4 0 1 1 0 0 0 6446 1535 6666 15867 11297 11297 1 0 0 IFEYETQR HGPVVGSTRRLYEKKIFEYETQRRRLSPPS RRLYEKKIFEYETQRRRLSPPSSSAASSYS K I F Q R R 0 1 0 0 0 1 2 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 8 0 1084.5189 P50402 P50402 38 45 EMD Emerin yes yes 2 0.0025878 153.04 By MS/MS 8.5 1.12 1 1 1 1 4 30732000 30732000 0 6447 945 6667 15868;15869;15870;15871 11298 11298 1 2175400 0 IFGGVLESDAR LRDSMLKYPDSHQPRIFGGVLESDARSESP HQPRIFGGVLESDARSESPQPAPDWGSQRP R I F A R S 1 1 0 1 0 0 1 2 0 1 1 0 0 1 0 1 0 0 0 1 0 0 11 0 1162.5982 O00165 O00165 140 150 HAX1 HCLS1-associated protein X-1 yes yes 2 0.00010969 160.36 By MS/MS 8.4 1.02 1 2 1 1 5 29749000 29749000 0 6448 73 6668 15872;15873;15874;15875;15876 11299;11300;11301 11299 2 2621800 0 IFGTDSQYNAYNEK NFIGNYASTFTWWDRIFGTDSQYNAYNEKR RIFGTDSQYNAYNEKRKKFEKKTE______ R I F E K R 1 0 2 1 0 1 1 1 0 1 0 1 0 1 0 1 1 0 2 0 0 0 14 0 1648.7369 Q15800 Q15800 271 284 MSMO1 Methylsterol monooxygenase 1 yes yes 2 1.2829E-87 395.04 By MS/MS 3.67 3.09 1 1 1 3 3204000 3204000 0 6449 1523 6669 15877;15878;15879 11302;11303 11303 2 204630 0 IFGVTTLDIVR TAEVFKKHGVYNPNKIFGVTTLDIVRANTF NPNKIFGVTTLDIVRANTFVAELKGLDPAR K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 P40926 P40926 166 176 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0003538 148.69 By MS/MS 8 0 1 1 969370 969370 0 6450 832 6670 15880 11304 11304 1 63949 0 IFHELTQTDK ITAANNLVAAAIDARIFHELTQTDKALFNR AIDARIFHELTQTDKALFNRLVPSVNGVRR R I F D K A 0 0 0 1 0 1 1 0 1 1 1 1 0 1 0 0 2 0 0 0 0 0 10 0 1230.6245 P11586 P11586 464 473 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 1.1096E-10 205.83 By MS/MS 5 1.22 1 2 2 2 1 8 17696000 17696000 0 6451 556 6671 15881;15882;15883;15884;15885;15886;15887;15888 11305;11306;11307 11306 3 465720 0 IFHTVTTTDDPVIR RITTRSEKPLRSIKRIFHTVTTTDDPVIRK RIFHTVTTTDDPVIRKLAKTQGNVFATDAI R I F I R K 0 1 0 2 0 0 0 0 1 2 0 0 0 1 1 0 4 0 0 2 0 0 14 0 1613.8413 O15371 O15371 223 236 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 3.185E-35 261.87 By MS/MS By MS/MS 6.1 0.943 3 4 2 1 7 3 82596000 82272000 324160 6452 172 6672 15889;15890;15891;15892;15893;15894;15895;15896;15897;15898 11308;11309;11310;11311;11312;11313;11314 11312 6 1098000 992310 IFHTVTTTDDPVIRK RITTRSEKPLRSIKRIFHTVTTTDDPVIRK IFHTVTTTDDPVIRKLAKTQGNVFATDAIL R I F R K L 0 1 0 2 0 0 0 0 1 2 0 1 0 1 1 0 4 0 0 2 0 0 15 1 1741.9363 O15371 O15371 223 237 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3;4 0.00032983 132.32 By MS/MS 6.2 0.98 3 3 3 1 10 26139000 26139000 0 6453 172 6673 15899;15900;15901;15902;15903;15904;15905;15906;15907;15908 11315;11316;11317;11318;11319 11316 4 349740 0 IFHVNWFR HWLSMEGRKGAQLPRIFHVNWFRRDEAGHF KGAQLPRIFHVNWFRRDEAGHFLWPGFGEN R I F F R R 0 1 1 0 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 1 0 0 8 0 1117.5821 Q16822;P35558 Q16822 529 536 PCK2;PCK1 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial;Phosphoenolpyruvate carboxykinase, cytosolic [GTP] yes no 3 0.0048912 124.34 By MS/MS 6 0 1 1 1018700 1018700 0 6454 1550 6674 15909 11320 11320 1 7944.2 0 IFIGTFK QHIDYRMRCILQDGRIFIGTFKAFDKHMNL RCILQDGRIFIGTFKAFDKHMNLILCDCDE R I F F K A 0 0 0 0 0 0 0 1 0 2 0 1 0 2 0 0 1 0 0 0 0 0 7 0 824.47963 P63162;P14678 P63162 26 32 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B yes no 2 0.021238 122.98 By MS/MS By matching 8 0 2 1 1 2880500 2855300 25191 6455 591 6675 15910;15911 11321 11321 1 188360 214910 IFINLPR KFQGPDNGQGPKYVKIFINLPRSMDFEEAE GQGPKYVKIFINLPRSMDFEEAERSEPTQA K I F P R S 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 7 0 871.52797 O43396 O43396 196 202 TXNL1 Thioredoxin-like protein 1 yes yes 2 0.047327 102.98 By MS/MS 8 0 1 1 627300 627300 0 6456 197 6676 15912 11322 11322 1 41383 0 IFKSDGLR AAQREFHGLGDCIIKIFKSDGLRGLYQGFN LGDCIIKIFKSDGLRGLYQGFNVSVQGIII K I F L R G 0 1 0 1 0 0 0 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 8 1 934.52362 P12235 P12235 164 171 SLC25A4 ADP/ATP translocase 1 yes yes 3 0.034906 96.492 By MS/MS 8 0 1 1 199110 199110 0 6457 562 6677 15913 11323 11323 1 13135 0 IFLDESAPDNVLEVTAR FETCPPRTFLPALCKIFLDESAPDNVLEVT LDESAPDNVLEVTARAITYYLDVSAECTRR K I F A R A 2 1 1 2 0 0 2 0 0 1 2 0 0 1 1 1 1 0 0 2 0 0 17 0 1887.9578 Q9ULT8 Q9ULT8 60 76 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00026585 166.62 By MS/MS 3 0.816 1 1 1 3 826830 826830 0 6458 2826 6678 15914;15915;15916 11324;11325 11324 2 34657 0 IFLITLDNSDPSLK QEICEQLNINHMIQRIFLITLDNSDPSLKS RIFLITLDNSDPSLKSGNGIPSRCVYLEEM R I F L K S 0 0 1 2 0 0 0 0 0 2 3 1 0 1 1 2 1 0 0 0 0 0 14 0 1574.8556 Q14139 Q14139 91 104 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 5.8998E-88 341.35 By MS/MS 4 0.816 1 1 1 3 2941900 2941900 0 6459 1408 6679 15917;15918;15919 11326;11327;11328 11326 3 79728 0 IFLLTNNNLLLADQK VVNKINRANGKSTSRIFLLTNNNLLLADQK IFLLTNNNLLLADQKSGQIKSEVPLVDVTK R I F Q K S 1 0 3 1 0 1 0 0 0 1 5 1 0 1 0 0 1 0 0 0 0 0 15 0 1728.9774 O43795 O43795 1007 1021 MYO1B Unconventional myosin-Ib yes yes 2 7.1871E-06 151.16 By MS/MS 4 0 1 1 88049 88049 0 6460 223 6680 15920 11329 11329 1 2403.6 0 IFLYPNAGQLK HAESPDDLVREAAYKIFLYPNAGQLKCLEE AAYKIFLYPNAGQLKCLEELLSSRDLLAKL K I F L K C 1 0 1 0 0 1 0 1 0 1 2 1 0 1 1 0 0 0 1 0 0 0 11 0 1262.7023 Q99797 Q99797 270 280 MIPEP Mitochondrial intermediate peptidase yes yes 2 0.0099677 98.392 By MS/MS 6 0.816 1 1 1 3 1116800 1116800 0 6461 2291 6681 15921;15922;15923 11330 11330 1 36112 0 IFNETPINPR PFQHLEKSAVLQEARIFNETPINPRRCLHI LQEARIFNETPINPRRCLHILTKILYLLNQ R I F P R R 0 1 2 0 0 0 1 0 0 2 0 0 0 1 2 0 1 0 0 0 0 0 10 0 1199.6299 Q9UBF2 Q9UBF2 33 42 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00028855 153.24 By MS/MS 4 0.816 1 1 1 3 9703900 9703900 0 6462 2748 6682 15924;15925;15926 11331 11331 1 361730 0 IFNLSGGEK GIMFSVRPPKKSWKKIFNLSGGEKTLSSLA KKSWKKIFNLSGGEKTLSSLALVFALHHYK K I F E K T 0 0 1 0 0 0 1 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 9 0 963.50255 Q9NTJ3 Q9NTJ3 1188 1196 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0023314 126.24 By MS/MS 2 0.816 1 1 1 3 1465300 1465300 0 6463 2630 6683 15927;15928;15929 11332 11332 1 41289 0 IFNVAIPR MEGYYTFHFLYFKDKIFNVAIPRFHMACPT FLYFKDKIFNVAIPRFHMACPTFRVSIARL K I F P R F 1 1 1 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 8 0 928.54944 Q9UK99 Q9UK99 391 398 FBXO3 F-box only protein 3 yes yes 2 0.0083526 124.59 By MS/MS 7 0 1 1 552550 552550 0 6464 2808 6684 15930 11333 11333 1 9874.2 0 IFPGDTILETGEVIPPMK HVSEKPYGIVEKKSRIFPGDTILETGEVIP GDTILETGEVIPPMKEFPDQHH________ R I F M K E 0 0 0 1 0 0 2 2 0 3 1 1 1 1 3 0 2 0 0 1 0 0 18 0 1956.0278 O95139 O95139 104 121 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes yes 2 0.012356 76.522 By MS/MS 9 0 1 1 93882 93882 0 6465 365 6685 15931 11334;11335 11335 198 2 53880 0 IFQKGESPVDYDGGR VLASRYGIRGFPTIKIFQKGESPVDYDGGR IFQKGESPVDYDGGRTRSDIVSRALDLFSD K I F G R T 0 1 0 2 0 1 1 3 0 1 0 1 0 1 1 1 0 0 1 1 0 0 15 1 1666.7951 Q15084 Q15084 242 256 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.00012506 141.13 By MS/MS 6 0 1 1 4902200 4902200 0 6466 1478 6686 15932 11336 11336 1 38228 0 IFQNAPTDPTQDFSTQVAK SIPDFQRKYVDKLEKIFQNAPTDPTQDFST APTDPTQDFSTQVAKLGHGLLSGEYSKPVP K I F A K L 2 0 1 2 0 3 0 0 0 1 0 1 0 2 2 1 3 0 0 1 0 0 19 0 2107.0222 P45974 P45974 361 379 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 9.5082E-05 152 By MS/MS 4 0.816 1 1 1 3 3213700 3213700 0 6467 873 6687 15933;15934;15935 11337 11337 1 95259 0 IFQNLCDITR ETGHVSGPDGQNPEKIFQNLCDITRVLLWR QNPEKIFQNLCDITRVLLWRYTSIPTSVEE K I F T R V 0 1 1 1 1 1 0 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 10 0 1278.6391 Q9NVI1 Q9NVI1 870 879 FANCI Fanconi anemia group I protein yes yes 2 0.00029549 152.97 By MS/MS 3 0 1 1 1277000 1277000 0 6468 2654 6688 15936 11338;11339 11338 2 33337 0 IFQNLDGALDEVVLK EKREQINITLDHRCRIFQNLDGALDEVVLK IFQNLDGALDEVVLKFEMGHVRARNLAYDT R I F L K F 1 0 1 2 0 1 1 1 0 1 3 1 0 1 0 0 0 0 0 2 0 0 15 0 1672.9036 Q02809 Q02809 206 220 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.029733 99.539 By MS/MS 5 0 1 1 0 0 0 6469 1256 6689 15937 11340 11340 1 0 0 IFRDEGGK GADIMYTGTVDCWRKIFRDEGGKAFFKGAW TVDCWRKIFRDEGGKAFFKGAWSNVLRGMG K I F G K A 0 1 0 1 0 0 1 2 0 1 0 1 0 1 0 0 0 0 0 0 0 0 8 1 920.47158 P12236 P12236 261 268 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2;3 0.02795 144.12 By MS/MS 8 0 2 2 16321000 16321000 0 6470 563 6690 15938;15939 11341;11342 11341 2 1076700 0 IFTIESTR WARKVQQRNLGVSGRIFTIESTRVRGRTGN NLGVSGRIFTIESTRVRGRTGNVLKLKVNF R I F T R V 0 1 0 0 0 0 1 0 0 2 0 0 0 1 0 1 2 0 0 0 0 0 8 0 965.5182 Q14204 Q14204 717 724 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0016027 180.93 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 5593900 5513900 79983 6471 1421 6691 15940;15941;15942;15943;15944 11343;11344 11343 2 244150 79983 IFTMAEVYGIR QMPLVAPVILPEMYKIFTMAEVYGIRTRSR EMYKIFTMAEVYGIRTRSRAVEIFTTCAHM K I F I R T 1 1 0 0 0 0 1 1 0 2 0 0 1 1 0 0 1 0 1 1 0 0 11 0 1298.6693 Q96P70 Q96P70 196 206 IPO9 Importin-9 yes yes 2 0.050511 70.399 By MS/MS 3.5 0.5 1 1 2 891610 891610 0 6472 2237 6692 15945;15946 11345 11345 1 24081 0 IFTNLYGR APKKTSFGSLKDEDRIFTNLYGRHDWRLKG SLKDEDRIFTNLYGRHDWRLKGSLSRGDWY R I F G R H 0 1 1 0 0 0 0 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 8 0 982.52362 P49821 P49821 41 48 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.031064 104.44 By MS/MS 7 0 1 1 0 0 0 6473 936 6693 15947 11346 11346 1 0 0 IFTQLEEFR EDMEIAEGCFRHIKKIFTQLEEFRASELLR FRHIKKIFTQLEEFRASELLRSGLDRSKYL K I F F R A 0 1 0 0 0 1 2 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 9 0 1181.6081 O60306 O60306 1004 1012 AQR Intron-binding protein aquarius yes yes 2 0.0074436 121.73 By MS/MS 3.5 0.5 1 1 2 438160 438160 0 6474 243 6694 15948;15949 11347 11347 1 11501 0 IFTSIGEDYDER TLRILFRPVASQLPRIFTSIGEDYDERVLP LPRIFTSIGEDYDERVLPSITTEILKSVVA R I F E R V 0 1 0 2 0 0 2 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1443.6518 P35232 P35232 106 117 PHB Prohibitin yes yes 2 1.7473E-16 219.5 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 89295000 88605000 690080 6475 782 6695 15950;15951;15952;15953;15954 11348;11349;11350;11351;11352 11351 5 7317000 5887300 IFTTGDVNK LRNLGIPLGQDAEEKIFTTGDVNKDGKLDF QDAEEKIFTTGDVNKDGKLDFEEFMKYLKD K I F N K D 0 0 1 1 0 0 0 1 0 1 0 1 0 1 0 0 2 0 0 1 0 0 9 0 993.51311 Q6NUK1 Q6NUK1 63 71 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.0022591 127.02 By MS/MS 7 0 1 1 3734100 3734100 0 6476 1690 6696 15955 11353 11353 1 66729 0 IFVFEPPPGVK EINPKVPVNLLRAGRIFVFEPPPGVKANML RAGRIFVFEPPPGVKANMLRTFSSIPVSRI R I F V K A 0 0 0 0 0 0 1 1 0 1 0 1 0 2 3 0 0 0 0 2 0 0 11 0 1228.6856 Q14204 Q14204 4144 4154 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0038854 112.41 By MS/MS 3 1.58 1 1 1 1 4 3363400 3363400 0 6477 1421 6697 15956;15957;15958;15959 11354;11355;11356;11357;11358 11356 5 149660 0 IFVGGLSPDTPEEK PKRAKAMKTKEPVKKIFVGGLSPDTPEEKI KIFVGGLSPDTPEEKIREYFGGFGEVESIE K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 Q14103 Q14103 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2 1.8011E-25 233.54 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 46786000 46698000 88046 6478 1406 6698 15960;15961;15962;15963;15964 11359;11360;11361;11362 11359 4 1765000 361450 IFVGNVSAACTSQELR LVVEMSRPRPLNTWKIFVGNVSAACTSQEL FVGNVSAACTSQELRSLFERRGRVIECDVV K I F L R S 2 1 1 0 1 1 1 1 0 1 1 0 0 1 0 2 1 0 0 2 0 0 16 0 1750.8672 Q96PK6 Q96PK6 81 96 RBM14 RNA-binding protein 14 yes yes 2 5.2577E-10 214.61 By MS/MS 5 0 1 1 893390 893390 0 6479 2238 6699 15965 11363 11363 1 36722 0 IFYPETTDVYDR TVQWLRAMESIGLPKIFYPETTDVYDRKNI LPKIFYPETTDVYDRKNIPRMIYCIHALSL K I F D R K 0 1 0 2 0 0 1 0 0 1 0 0 0 1 1 0 2 0 2 1 0 0 12 0 1517.7038 Q13576 Q13576 128 139 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.004907 106.62 By MS/MS 3 0 1 1 487130 487130 0 6480 1383 6700 15966 11364 11364 1 12717 0 IGAEVYHNLK MILPVGAANFREAMRIGAEVYHNLKNVIKE REAMRIGAEVYHNLKNVIKEKYGKDATNVG R I G L K N 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1142.6084 P06733 P06733 184 193 ENO1 Alpha-enolase yes yes 3 0.038187 76.17 By MS/MS By matching 6.75 0.829 2 1 1 3 1 9670400 9649300 21187 6481 482 6701 15967;15968;15969;15970 11365 11365 1 88812 64978 IGAFGYMECSAK QEPVKPEEGRDMANRIGAFGYMECSAKTKD ANRIGAFGYMECSAKTKDGVREVFEMATRA R I G A K T 2 0 0 0 1 0 1 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 12 0 1332.5842 P61586 P61586 151 162 RHOA Transforming protein RhoA yes yes 2 0.0083125 94.616 By MS/MS 9 0 1 1 1685800 1685800 0 6482 1101 6702 15971 11366 11366 862 1 967510 0 IGAHSHIR TTKVPEIRDVTRIERIGAHSHIRGLGLDDA DVTRIERIGAHSHIRGLGLDDALEPRQASQ R I G I R G 1 1 0 0 0 0 0 1 2 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 889.48823 Q9Y230 Q9Y230 22 29 RUVBL2 RuvB-like 2 yes yes 2 0.0024952 153.73 By MS/MS 6.5 1.12 1 1 1 1 4 24114000 24114000 0 6483 2864 6703 15972;15973;15974;15975 11367 11367 1 223880 0 IGALQGAVDR GIESLEGVLQMMQTRIGALQGAVDRIKAKI MMQTRIGALQGAVDRIKAKIVEPYNKIVAR R I G D R I 2 1 0 1 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 998.55089 Q9UP83 Q9UP83 138 147 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.0038973 111.06 By MS/MS 4 0 1 1 1381100 1381100 0 6484 2850 6704 15976 11368 11368 1 37702 0 IGASTLLSDIER KEELGDEWLKPELFRIGASTLLSDIERQIY LFRIGASTLLSDIERQIYHHVTGRYAAYHD R I G E R Q 1 1 0 1 0 0 1 1 0 2 2 0 0 0 0 2 1 0 0 0 0 0 12 0 1273.6878 Q9Y315 Q9Y315 288 299 DERA Deoxyribose-phosphate aldolase yes yes 2 0.00035122 145.55 By MS/MS 7.67 0.471 1 2 3 2367200 2367200 0 6485 2912 6705 15977;15978;15979 11369;11370 11369 2 142480 0 IGDEDVGR KKGPKVTVKVYFDLRIGDEDVGRVIFGLFG KVYFDLRIGDEDVGRVIFGLFGKTVPKTVD R I G G R V 0 1 0 2 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 859.40356 P23284 P23284 52 59 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0080258 125.81 By MS/MS 9 0 1 1 415380 415380 0 6486 667 6706 15980 11371 11371 1 238390 0 IGDELYLEPLEDGLSLR GNVKVLGKAVHSLSRIGDELYLEPLEDGLS DELYLEPLEDGLSLRTVNSSRSAYACFLFA R I G L R T 0 1 0 2 0 0 3 2 0 1 5 0 0 0 1 1 0 0 1 0 0 0 17 0 1930.9888 Q99638 Q99638 23 39 RAD9A Cell cycle checkpoint control protein RAD9A yes yes 2 3.3848E-07 154.23 By MS/MS 6 0 1 1 496240 496240 0 6487 2279 6707 15981 11372 11372 1 3869.7 0 IGDEYFTFITDCK EDDVGTGAGLLEIKKIGDEYFTFITDCKDP KKIGDEYFTFITDCKDPKACTILLRGASKE K I G C K D 0 0 0 2 1 0 1 1 0 2 0 1 0 2 0 0 2 0 1 0 0 0 13 0 1607.7178 P49368 P49368 355 367 CCT3 T-complex protein 1 subunit gamma yes yes 2 6.8292E-12 206.36 By MS/MS 5.5 0.5 1 1 2 1254000 1254000 0 6488 916 6708 15982;15983 11373 11373 1 11490 0 IGDEYFTFITDCKDPK EDDVGTGAGLLEIKKIGDEYFTFITDCKDP GDEYFTFITDCKDPKACTILLRGASKEILS K I G P K A 0 0 0 3 1 0 1 1 0 2 0 2 0 2 1 0 2 0 1 0 0 0 16 1 1947.8924 P49368 P49368 355 370 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.0024638 103.76 By MS/MS 5.57 1.59 1 1 1 2 1 1 7 54334000 54334000 0 6489 916 6709 15984;15985;15986;15987;15988;15989;15990 11374;11375 11375 2 478370 0 IGDFGLVTSLK LKPSNIFLVDTKQVKIGDFGLVTSLKNDGK KQVKIGDFGLVTSLKNDGKRTRSKGTLRYM K I G L K N 0 0 0 1 0 0 0 2 0 1 2 1 0 1 0 1 1 0 0 1 0 0 11 0 1148.6441 P19525 P19525 430 440 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 2 0.0025872 139.43 By MS/MS 5 0 1 1 645100 645100 0 6490 634 6710 15991 11376 11376 1 26516 0 IGDFIDVSEGPLIPR EKASQNPERIVKLHRIGDFIDVSEGPLIPR IGDFIDVSEGPLIPRTSICFQYEVSAVHNL R I G P R T 0 1 0 2 0 0 1 2 0 3 1 0 0 1 2 1 0 0 0 1 0 0 15 0 1626.8617 Q9NYK5 Q9NYK5 257 271 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 1.7788E-05 140.24 By MS/MS 8 0.816 1 1 1 3 4260000 4260000 0 6491 2696 6711 15992;15993;15994 11377;11378;11379;11380 11377 4 310080 0 IGDIIKSEK LQQVINVDLIHIENRIGDIIKSEKHVQLVL IHIENRIGDIIKSEKHVQLVLGQLIDENYL R I G E K H 0 0 0 1 0 0 1 1 0 3 0 2 0 0 0 1 0 0 0 0 0 0 9 1 1001.5757 O94874 O94874 97 105 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.019444 83.948 By MS/MS 4.5 0.5 1 1 2 1195200 1195200 0 6492 354 6712 15995;15996 11381 11381 1 48007 0 IGDKEGALTAFR EIRDAMMAKAEYLCRIGDKEGALTAFRKTY LCRIGDKEGALTAFRKTYDKTVALGHRLDI R I G F R K 2 1 0 1 0 0 1 2 0 1 1 1 0 1 0 0 1 0 0 0 0 0 12 1 1276.6776 Q15008 Q15008 114 125 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0040793 138.42 By MS/MS By matching 6.5 0.5 1 1 1 1 3675100 3655000 20080 6493 1460 6713 15997;15998 11382 11382 1 65315 61583 IGDKEGALTAFRK EIRDAMMAKAEYLCRIGDKEGALTAFRKTY CRIGDKEGALTAFRKTYDKTVALGHRLDIV R I G R K T 2 1 0 1 0 0 1 2 0 1 1 2 0 1 0 0 1 0 0 0 0 0 13 2 1404.7725 Q15008 Q15008 114 126 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 3 0.0052987 98.337 By MS/MS 6.5 0.5 1 1 2 7833600 7833600 0 6494 1460 6714 15999;16000 11383 11383 1 126140 0 IGDLACANIQHLSSR FFKSSTNLSEFVMRKIGDLACANIQHLSSR IGDLACANIQHLSSRSLVNIVKMFRFTHVD K I G S R S 2 1 1 1 1 1 0 1 1 2 2 0 0 0 0 2 0 0 0 0 0 0 15 0 1653.8257 Q7L8L6 Q7L8L6 340 354 FASTKD5 FAST kinase domain-containing protein 5 yes yes 3 0.029367 64.675 By MS/MS 5 0 1 1 4515300 4515300 0 6495 1770 6715 16001 11384 11384 1 185600 0 IGDSSQGDNNLQK SAAAMEEDSEASSSRIGDSSQGDNNLQKLG SRIGDSSQGDNNLQKLGPDDVSVDIDAIRR R I G Q K L 0 0 2 2 0 2 0 2 0 1 1 1 0 0 0 2 0 0 0 0 0 0 13 0 1374.6375 Q05086 Q05086 214 226 UBE3A Ubiquitin-protein ligase E3A yes yes 2 2.7119E-08 193.28 By MS/MS 4 0 1 1 474400 474400 0 6496 1269 6716 16002 11385 11385 1 12951 0 IGDVVGSSGANQQTSGK VEAYQWSVSEGRWIKIGDVVGSSGANQQTS DVVGSSGANQQTSGKVLYEGKEFDYVFSID K I G G K V 1 0 1 1 0 2 0 4 0 1 0 1 0 0 0 3 1 0 0 2 0 0 17 0 1603.7802 Q9Y263 Q9Y263 377 393 PLAA Phospholipase A-2-activating protein yes yes 2 4.1343E-33 234.04 By MS/MS 1.5 0.5 1 1 2 485850 485850 0 6497 2869 6717 16003;16004 11386;11387 11386 2 23738 0 IGEDYVKDLSQLTK LLLCNPGLAELIAEKIGEDYVKDLSQLTKL KIGEDYVKDLSQLTKLHSFLGDDVFLRELA K I G T K L 0 0 0 2 0 1 1 1 0 1 2 2 0 0 0 1 1 0 1 1 0 0 14 1 1607.8407 P06737 P06737 508 521 PYGL Glycogen phosphorylase, liver form yes yes 3 0.019482 72.523 By MS/MS 3.5 0.5 1 1 2 582930 582930 0 6498 483 6718 16005;16006 11388 11388 1 15880 0 IGEEQSAEDAEDGPPELLFIHGGHTAK SSGTDRRLNVWDLSKIGEEQSAEDAEDGPP GPPELLFIHGGHTAKISDFSWNPNEPWVIC K I G A K I 3 0 0 2 0 1 5 4 2 2 2 1 0 1 2 1 1 0 0 0 0 0 27 0 2846.3359 Q16576 Q16576 349 375 RBBP7 Histone-binding protein RBBP7 yes yes 3 0.035168 40.718 By MS/MS 6 0 1 1 4135900 4135900 0 6499 1541 6719 16007 11389 11389 1 32252 0 IGEEQSPEDAEDGPPELLFIHGGHTAK SSGTDRRLNVWDLSKIGEEQSPEDAEDGPP GPPELLFIHGGHTAKISDFSWNPNEPWVIC K I G A K I 2 0 0 2 0 1 5 4 2 2 2 1 0 1 3 1 1 0 0 0 0 0 27 0 2872.3515 Q09028 Q09028 350 376 RBBP4 Histone-binding protein RBBP4 yes yes 3;4 0.00042469 72.082 By MS/MS 6 0 2 2 12903000 12903000 0 6500 1296 6720 16008;16009 11390;11391 11390 2 100620 0 IGEGTYGVVYK ______________________________ KIEKIGEGTYGVVYKGRHKTTGQVVAMKKI K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 P06493;P24941;Q00526 P06493 10 20 CDK1;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 2 6.9026E-16 214.96 By MS/MS By matching 8 0 2 1 1 37849000 37800000 48907 6501 477;682 6721 16010;16011 11392 11392 1 2493600 417240 IGELFSK LLQTFRSSRLMDEFKIGELFSKFYGELALK SRLMDEFKIGELFSKFYGELALKKKIPDTV K I G S K F 0 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 7 0 792.43815 P78527 P78527 149 155 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.041051 107.32 By MS/MS 2.5 1.12 1 1 1 1 4 1301900 1301900 0 6502 1197 6722 16012;16013;16014;16015 11393 11393 1 55588 0 IGEYLEK YIQCIAAISRQAGHRIGEYLEKIIPLVVKF ISRQAGHRIGEYLEKIIPLVVKFCNVDDDE R I G E K I 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 7 0 850.44363 Q86VP6 Q86VP6 249 255 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.019733 127.12 By MS/MS 3.5 0.5 1 1 2 2720700 2720700 0 6503 1829 6723 16016;16017 11394;11395 11395 2 73119 0 IGFDVVTLSGTR VDGFYTEEVRQGGRRIGFDVVTLSGTRGPL GRRIGFDVVTLSGTRGPLSRVGLEPPPGKR R I G T R G 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 1 2 0 0 2 0 0 12 0 1263.6823 Q9BSD7 Q9BSD7 48 59 NTPCR Cancer-related nucleoside-triphosphatase yes yes 2 5.6149E-05 164.66 By MS/MS 9 0 1 1 762410 762410 0 6504 2335 6724 16018 11396 11396 1 437550 0 IGFFQGDIR FERVVECVMLCHGAKIGFFQGDIRLLMDDL LCHGAKIGFFQGDIRLLMDDLKVLQPTVFP K I G I R L 0 1 0 1 0 1 0 2 0 2 0 0 0 2 0 0 0 0 0 0 0 0 9 0 1051.5451 P33121 P33121 341 349 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.0010788 140.35 By MS/MS 5 0 1 1 1452600 1452600 0 6505 766 6725 16019 11397 11397 1 59706 0 IGFLNDKVEER LTMADGVPGVQNILKIGFLNDKVEERRERY NILKIGFLNDKVEERRERYMDSYDIVLEKD K I G E R R 0 1 1 1 0 0 2 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 1 1318.6881 Q969T7 Q969T7 250 260 NT5C3B 7-methylguanosine phosphate-specific 5-nucleotidase yes yes 3 0.046615 64.64 By MS/MS 8 0 1 1 0 0 0 6506 2108 6726 16020 11398 11398 1 0 0 IGFPWSEIR LGLNIYEKDDKLTPKIGFPWSEIRNISFND DKLTPKIGFPWSEIRNISFNDKKFVIKPID K I G I R N 0 1 0 0 0 0 1 1 0 2 0 0 0 1 1 1 0 1 0 0 0 0 9 0 1103.5764 P15311;P26038;P35241 P15311 238 246 EZR;MSN;RDX Ezrin;Moesin;Radixin yes no 2 0.033777 88.948 By MS/MS 5.5 0.5 1 1 2 872140 872140 0 6507 598 6727 16021;16022 11399 11399 1 17893 0 IGFVGFPSVGK GPGEGFDVAKTGDARIGFVGFPSVGKSTLL GDARIGFVGFPSVGKSTLLSNLAGVYSEVA R I G G K S 0 0 0 0 0 0 0 3 0 1 0 1 0 2 1 1 0 0 0 2 0 0 11 0 1106.6124 Q9Y295 Q9Y295 67 77 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 0.00056477 140.11 By MS/MS 7 0 1 1 884270 884270 0 6508 2880 6728 16023 11400 11400 1 15802 0 IGGAQNR SSEPCALCSLHSIGKIGGAQNRSYSKLLCG CSLHSIGKIGGAQNRSYSKLLCGLLAERLR K I G N R S 1 1 1 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 7 0 714.37729 P14174 P14174 68 74 MIF Macrophage migration inhibitory factor yes yes 2 0.019894 126.68 By MS/MS By matching 10 0 2 1 1 1675500 1650700 24803 6509 586 6729 16024;16025 11401 11401 1 1754500 636170 IGGIGTVPVGR PTDKPLRLPLQDVYKIGGIGTVPVGRVETG DVYKIGGIGTVPVGRVETGVLKPGMVVTFA K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 Q5VTE0;P68104;Q05639 Q5VTE0 256 266 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 7.9701E-07 181.55 By MS/MS By MS/MS 6 2.57 1 1 1 1 3 2 2 1 1 10 3 208170000 207590000 578780 6510 1184 6730 16026;16027;16028;16029;16030;16031;16032;16033;16034;16035;16036;16037;16038 11402;11403;11404;11405;11406;11407;11408;11409;11410;11411;11412 11412 11 4790100 2747900 IGGSTDTGK GYSSDDINKFLWMVRIGGSTDTGKHIKEND FLWMVRIGGSTDTGKHIKENDYYTPTGEFR R I G G K H 0 0 0 1 0 0 0 3 0 1 0 1 0 0 0 1 2 0 0 0 0 0 9 0 834.40831 P46977 P46977 602 610 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.00073642 148.04 By MS/MS 1.5 0.5 1 1 2 1284900 1284900 0 6511 893 6731 16039;16040 11413;11414 11413 2 63265 0 IGGVQQDTILAEGLHFR VFTVEGGHRAIFFNRIGGVQQDTILAEGLH GVQQDTILAEGLHFRIPWFQYPIIYDIRAR R I G F R I 1 1 0 1 0 2 1 3 1 2 2 0 0 1 0 0 1 0 0 1 0 0 17 0 1852.9795 Q99623 Q99623 55 71 PHB2 Prohibitin-2 yes yes 2;3 4.1585E-25 224.43 By MS/MS 7.67 0.471 1 2 3 6085000 6085000 0 6512 2277 6732 16041;16042;16043 11415;11416 11415 2 397860 0 IGHHSTSDDSSAYR VAENQPFLIEAMTYRIGHHSTSDDSSAYRS RIGHHSTSDDSSAYRSVDEVNYWDKQDHPI R I G Y R S 1 1 0 2 0 0 0 1 2 1 0 0 0 0 0 4 1 0 1 0 0 0 14 0 1531.6651 P12694 P12694 333 346 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes yes 3 0.00034996 130.19 By MS/MS 7 0 1 1 929740 929740 0 6513 567 6733 16044 11417 11417 1 16615 0 IGHPAPNFK ______________________________ SSGNAKIGHPAPNFKATAVMPDGQFKDISL K I G F K A 1 0 1 0 0 0 0 1 1 1 0 1 0 1 2 0 0 0 0 0 0 0 9 0 979.52395 Q06830 Q06830 8 16 PRDX1 Peroxiredoxin-1 yes yes 3 0.025488 82.279 By MS/MS By matching 9.33 0.471 2 1 2 1 2602100 2569000 33161 6514 1277 6734 16045;16046;16047 11418 11418 1 1516800 357390 IGIEIIK IPALDSLTPANEDQKIGIEIIKRTLKIPAM TPANEDQKIGIEIIKRTLKIPAMTIAKNAG K I G I K R 0 0 0 0 0 0 1 1 0 4 0 1 0 0 0 0 0 0 0 0 0 0 7 0 784.50584 P10809 P10809 463 469 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.019236 128.48 By MS/MS By matching 6.4 1.02 1 2 1 1 4 1 41717000 41626000 90824 6515 544 6735 16048;16049;16050;16051;16052 11419;11420 11419 2 386560 278550 IGIEIIKR IPALDSLTPANEDQKIGIEIIKRTLKIPAM PANEDQKIGIEIIKRTLKIPAMTIAKNAGV K I G K R T 0 1 0 0 0 0 1 1 0 4 0 1 0 0 0 0 0 0 0 0 0 0 8 1 940.60695 P10809 P10809 463 470 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.006938 147.34 By MS/MS By matching 7.43 1.55 1 4 3 2 2 2 12 2 157330000 157030000 297350 6516 544 6736 16053;16054;16055;16056;16057;16058;16059;16060;16061;16062;16063;16064;16065;16066 11421;11422;11423;11424 11422 4 1841100 911960 IGIFGQDEDVTSK ITGDNKGTAVAICRRIGIFGQDEDVTSKAF RRIGIFGQDEDVTSKAFTGREFDELNPSAQ R I G S K A 0 0 0 2 0 1 1 2 0 2 0 1 0 1 0 1 1 0 0 1 0 0 13 0 1407.6882 P16615 P16615 638 650 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 6.5754E-12 210.95 By MS/MS By matching 2.5 1.41 3 1 2 1 1 6 2 49490000 49376000 113280 6517 608 6737 16067;16068;16069;16070;16071;16072;16073;16074 11425;11426;11427;11428;11429;11430;11431 11425 7 1844900 142560 IGIGELITR VLRSPARHQLDHVFKIGIGELITRSAKHIF LDHVFKIGIGELITRSAKHIFKTYLQGVEL K I G T R S 0 1 0 0 0 0 1 2 0 3 1 0 0 0 0 0 1 0 0 0 0 0 9 0 970.58113 O75153 O75153 811 819 CLUH Clustered mitochondria protein homolog yes yes 2 0.0020363 129.42 By MS/MS 3.5 0.5 1 1 2 656750 656750 0 6518 285 6738 16075;16076 11432 11432 1 17228 0 IGIIDGEYVVNPTR SLSDIPWNGPVGAVRIGIIDGEYVVNPTRK RIGIIDGEYVVNPTRKEMSSSTLNLVVAGA R I G T R K 0 1 1 1 0 0 1 2 0 3 0 0 0 0 1 0 1 0 1 2 0 0 14 0 1544.8199 Q8TCS8 Q8TCS8 193 206 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.00015503 145.81 By MS/MS 5 0 1 1 832410 832410 0 6519 1996 6739 16077 11433 11433 1 34215 0 IGIIGGTGLDDPEILEGR ______________________________ IGGTGLDDPEILEGRTEKYVDTPFGKPSDA K I G G R T 0 1 0 2 0 0 2 5 0 4 2 0 0 0 1 0 1 0 0 0 0 0 18 0 1823.9629 Q13126 Q13126 12 29 MTAP S-methyl-5-thioadenosine phosphorylase yes yes 2 4.5658E-05 164.64 By MS/MS 8 0 1 1 583380 583380 0 6520 1336 6740 16078 11434 11434 1 38486 0 IGILHENFQTLK KDAVFIPAGWDNDKKIGILHENFQTLKAED DKKIGILHENFQTLKAEDNFEDIITKPPVR K I G L K A 0 0 1 0 0 1 1 1 1 2 2 1 0 1 0 0 1 0 0 0 0 0 12 0 1411.7823 Q9Y6G9 Q9Y6G9 333 344 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 2.0266E-07 189.58 By MS/MS 6 0 1 1 5825000 5825000 0 6521 3005 6741 16079 11435 11435 1 45424 0 IGIVGLPNVGK IKPPPIIGRFGTSLKIGIVGLPNVGKSTFF TSLKIGIVGLPNVGKSTFFNVLTNSQASAE K I G G K S 0 0 1 0 0 0 0 3 0 2 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1065.6546 Q9NTK5 Q9NTK5 25 35 OLA1 Obg-like ATPase 1 yes yes 2 0.0044312 110.12 By MS/MS 7 0 1 1 1220300 1220300 0 6522 2632 6742 16080 11436 11436 1 21806 0 IGKPHTVPCK KLSIVPVRRGYWGNKIGKPHTVPCKVTGRC YWGNKIGKPHTVPCKVTGRCGSVLVRLIPA K I G C K V 0 0 0 0 1 0 0 1 1 1 0 2 0 0 2 0 1 0 0 1 0 0 10 1 1135.6172 P15880 P15880 174 183 RPS2 40S ribosomal protein S2 yes yes 2 0.0068371 126.31 By MS/MS 8 0 1 1 357260 357260 0 6523 602 6743 16081 11437 11437 1 23568 0 IGLAEEIR EGIPRIYVSANSGARIGLAEEIRHMFHVAW SANSGARIGLAEEIRHMFHVAWVDPEDPYK R I G I R H 1 1 0 0 0 0 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 8 0 899.50763 Q13085 Q13085 1724 1731 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 0.050214 95.909 By MS/MS 1 0 1 1 0 0 0 6524 1332 6744 16082 11438 11438 1 0 0 IGLENFLLR LSADNMDPDFVERRRIGLENFLLRIASHPI FVERRRIGLENFLLRIASHPILCRDKIFYL R I G L R I 0 1 1 0 0 0 1 1 0 1 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1073.6233 O95219 O95219 156 164 SNX4 Sorting nexin-4 yes yes 2 0.00079132 146.81 By MS/MS 6 0 1 1 1393000 1393000 0 6525 375 6745 16083 11439 11439 1 10863 0 IGLETSLR EDVEMSEDAYTVLTRIGLETSLRYAIQLIT AYTVLTRIGLETSLRYAIQLITAASLVCRK R I G L R Y 0 1 0 0 0 0 1 1 0 1 2 0 0 0 0 1 1 0 0 0 0 0 8 0 887.50763 Q9Y230 Q9Y230 393 400 RUVBL2 RuvB-like 2 yes yes 2 0.0056149 134.81 By MS/MS 7 0.816 1 1 1 3 42682000 42682000 0 6526 2864 6746 16084;16085;16086 11440 11440 1 383390 0 IGLFGGAGVGK IKVVDLLAPYAKGGKIGLFGGAGVGKTVLI KGGKIGLFGGAGVGKTVLIMELINNVAKAH K I G G K T 1 0 0 0 0 0 0 5 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 0 974.55492 P06576 P06576 202 212 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.0050162 107.66 By MS/MS By MS/MS 7 0.894 2 1 2 3 2 127520000 126900000 612820 6527 478 6747 16087;16088;16089;16090;16091 11441;11442;11443;11444;11445 11441 5 1242800 2201700 IGLFNSSADR MLDDSSDPILTTIRRIGLFNSSADRVKVIF TTIRRIGLFNSSADRVKVIFHPEFLSSTSP R I G D R V 1 1 1 1 0 0 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 10 0 1078.5407 P13807 P13807 463 472 GYS1 Glycogen [starch] synthase, muscle yes yes 2 0.00087065 128.86 By MS/MS 4.5 0.5 1 1 2 1103000 1103000 0 6528 583 6748 16092;16093 11446 11446 1 43474 0 IGLFYMDNDLITR VALGHRLDIVFYLLRIGLFYMDNDLITRNT LRIGLFYMDNDLITRNTEKAKSLIEEGGDW R I G T R N 0 1 1 2 0 0 0 1 0 2 2 0 1 1 0 0 1 0 1 0 0 0 13 0 1569.7861 Q15008 Q15008 147 159 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 2.3012E-05 164.48 By MS/MS 5.8 2.48 1 1 2 1 5 5561000 5561000 0 6529 1460 6749;6750 16094;16095;16096;16097;16098 11447;11448;11449;11450;11451;11452;11453 11448 1145 7 99607 0 IGLINDMVR RRLATLLGLQAPPTRIGLINDMVRFNVLQY QAPPTRIGLINDMVRFNVLQYVVPEVKDLY R I G V R F 0 1 1 1 0 0 0 1 0 2 1 0 1 0 0 0 0 0 0 1 0 0 9 0 1029.5641 Q14152 Q14152 368 376 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0011813 132.76 By MS/MS By MS/MS 2.6 0.49 2 3 4 1 17969000 17718000 250640 6530 1409 6751;6752 16099;16100;16101;16102;16103 11454;11455;11456;11457 11456 1084 4 480740 359210 IGLIQFCLSAPK QKVSNSGITRVEKAKIGLIQFCLSAPKTDM KAKIGLIQFCLSAPKTDMDNQIVVSDYAQM K I G P K T 1 0 0 0 1 1 0 1 0 2 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.7428 P50991 P50991 246 257 CCT4 T-complex protein 1 subunit delta yes yes 2 9.9734E-08 192.64 By MS/MS 6.75 0.829 2 1 1 4 72906000 72906000 0 6531 956 6753 16104;16105;16106;16107 11458;11459 11458 2 579000 0 IGLSVSEVIEGYEIACR VFAGALLELAEELLRIGLSVSEVIEGYEIA LSVSEVIEGYEIACRKAHEILPNLVCCSAK R I G C R K 1 1 0 0 1 0 3 2 0 3 1 0 0 0 0 2 0 0 1 2 0 0 17 0 1893.9506 P50990 P50990 121 137 CCT8 T-complex protein 1 subunit theta yes yes 2 4.0946E-11 213.99 By MS/MS 6 0 1 1 1045400 1045400 0 6532 955 6754 16108 11460 11460 1 8152.1 0 IGLTNLLGAR SLETPVDSQLYRYVKIGLTNLLGARLYFAP YRYVKIGLTNLLGARLYFAPKVLTPYCYTI K I G A R L 1 1 1 0 0 0 0 2 0 1 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1026.6186 Q14CZ7 Q14CZ7 542 551 FASTKD3 FAST kinase domain-containing protein 3 yes yes 2 1.4418E-06 177.3 By MS/MS 6 0 1 1 2734400 2734400 0 6533 1456 6755 16109 11461 11461 1 21323 0 IGMGATLDIQR LEPIFSSSEPTSEARIGMGATLDIQRQQRM SEARIGMGATLDIQRQQRMELLDRQLMFSQ R I G Q R Q 1 1 0 1 0 1 0 2 0 2 1 0 1 0 0 0 1 0 0 0 0 0 11 0 1173.6176 Q8NBM4 Q8NBM4 233 243 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 9.4171E-06 174.86 By MS/MS 1 0 1 1 825080 825080 0 6534 1942 6756 16110 11462 11462 1298 1 40312 0 IGNAYAVLSNPEK PDKNHAPGATDAFKKIGNAYAVLSNPEKRK KKIGNAYAVLSNPEKRKQYDLTGNEEQACN K I G E K R 2 0 2 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 1 1 0 0 13 0 1374.7143 Q8TBM8 Q8TBM8 152 164 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 1.6737E-07 181.31 By MS/MS 7 0.816 1 1 1 3 2931000 2931000 0 6535 1989 6757 16111;16112;16113 11463;11464 11463 2 76905 0 IGNFIVK VGICGSDVHYWEYGRIGNFIVKKPMVLGHE VHYWEYGRIGNFIVKKPMVLGHEASGTVEK R I G V K K 0 0 1 0 0 0 0 1 0 2 0 1 0 1 0 0 0 0 0 1 0 0 7 0 789.47487 Q00796 Q00796 57 63 SORD Sorbitol dehydrogenase yes yes 2 0.0053599 178.02 By MS/MS 7.5 0.5 1 1 2 2402100 2402100 0 6536 1237 6758 16114;16115 11465 11465 1 62357 0 IGNLQTDLSDGLR FTRWCNEHLKCVNKRIGNLQTDLSDGLRLI KRIGNLQTDLSDGLRLIALLEVLSQKRMYR R I G L R L 0 1 1 2 0 1 0 2 0 1 3 0 0 0 0 1 1 0 0 0 0 0 13 0 1400.726 O75369 O75369 37 49 FLNB Filamin-B yes yes 2 0.018331 84.188 By MS/MS 2 0 1 1 196690 196690 0 6537 300 6759 16116 11466 11466 1 9776.5 0 IGNSYFKEEK ENREDYRQIAKAYARIGNSYFKEEKYKDAI KAYARIGNSYFKEEKYKDAIHFYNKSLAEH R I G E K Y 0 0 1 0 0 0 2 1 0 1 0 2 0 1 0 1 0 0 1 0 0 0 10 1 1213.5979 P31948 P31948 306 315 STIP1 Stress-induced-phosphoprotein 1 yes yes 2;3 0.00036704 171.33 By MS/MS 5.8 0.748 2 2 1 5 10664000 10664000 0 6538 762 6760 16117;16118;16119;16120;16121 11467;11468;11469 11468 3 182530 0 IGNTGGMLDNILASK IGPATVGGIKPGCFKIGNTGGMLDNILASK IGNTGGMLDNILASKLYRPGSVAYVSRSGG K I G S K L 1 0 2 1 0 0 0 3 0 2 2 1 1 0 0 1 1 0 0 0 0 0 15 0 1502.7763 P53396 P53396 636 650 ACLY ATP-citrate synthase yes yes 2 6.1389E-29 265.77 By MS/MS 3.38 1.32 1 1 2 2 2 8 23583000 23583000 0 6539 1001 6761;6762 16122;16123;16124;16125;16126;16127;16128;16129 11470;11471;11472;11473;11474;11475 11473 759 6 682980 0 IGPILDNSTLQSEVKPILEK PVANVRFNVAKSLQKIGPILDNSTLQSEVK DNSTLQSEVKPILEKLTQDQDVDVKYFAQE K I G E K L 0 0 1 1 0 1 2 1 0 3 3 2 0 0 2 2 1 0 0 1 0 0 20 1 2193.2256 P30153 P30153 547 566 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 3 0.0065423 69.361 By MS/MS 6 0 1 1 20827000 20827000 0 6540 737 6763 16130 11476 11476 1 162410 0 IGPILDTNALQGEVKPVLQK QVANVRFNVAKSLQKIGPILDTNALQGEVK DTNALQGEVKPVLQKLGQDEDMDVKYFAQE K I G Q K L 1 0 1 1 0 2 1 2 0 2 3 2 0 0 2 0 1 0 0 2 0 0 20 1 2132.2205 P30154 P30154 559 578 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 3 0.0063205 69.935 By MS/MS 6 0 1 1 7461000 7461000 0 6541 738 6764 16131 11477 11477 1 58181 0 IGPITPLEFYR TFTWEYRDKDKNYQKIGPITPLEFYREHVK NYQKIGPITPLEFYREHVKPLFNMEDKICL K I G Y R E 0 1 0 0 0 0 1 1 0 2 1 0 0 1 2 0 1 0 1 0 0 0 11 0 1304.7129 Q13867 Q13867 245 255 BLMH Bleomycin hydrolase yes yes 2 0.014074 94.692 By MS/MS 7 0.816 1 1 1 3 756090 756090 0 6542 1398 6765 16132;16133;16134 11478 11478 1 9955.3 0 IGPLGLSPK CTGGEVGATSALAPKIGPLGLSPKKVGDDI SALAPKIGPLGLSPKKVGDDIAKATGDWKG K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.016949 98.458 By MS/MS 9.5 0.5 1 1 2 1008300 1008300 0 6543 733 6766 16135;16136 11479 11479 1 871980 0 IGPYTNFVNIGER AFEGHMLLSGLEPFRIGPYTNFVNIGERCN FRIGPYTNFVNIGERCNVAGSRKFAKLIMA R I G E R C 0 1 2 0 0 0 1 2 0 2 0 0 0 1 1 0 1 0 1 1 0 0 13 0 1478.7518 Q99707 Q99707 365 377 MTR Methionine synthase yes yes 2 1.6634E-05 182.23 By MS/MS 3 0 1 1 799880 799880 0 6544 2284 6767 16137 11480 11480 1 20881 0 IGQETDKTTTR RLKEFLALASSSLLKIGQETDKTTTRNRES SLLKIGQETDKTTTRNRESVYLLLDMIVQE K I G T R N 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 0 4 0 0 0 0 0 11 1 1248.631 Q9Y2A7 Q9Y2A7 1069 1079 NCKAP1 Nck-associated protein 1 yes yes 2 0.039417 110.08 By MS/MS 4 0 1 1 411990 411990 0 6545 2882 6768 16138 11481 11481 1 11247 0 IGQFVFAR WLLAVRSIQPEEKERIGQFVFARDAKAAMA QPEEKERIGQFVFARDAKAAMAGRLMIRKL R I G A R D 1 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 0 0 1 0 0 8 0 936.51814 Q9NRN7 Q9NRN7 48 55 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 2 0.0068449 145.04 By MS/MS 7.5 0.5 1 1 2 1399900 1399900 0 6546 2608 6769 16139;16140 11482 11482 1 58858 0 IGQGTFGEVFK CPFCDEVSKYEKLAKIGQGTFGEVFKARHR KLAKIGQGTFGEVFKARHRKTGQKVALKKV K I G F K A 0 0 0 0 0 1 1 3 0 1 0 1 0 2 0 0 1 0 0 1 0 0 11 0 1181.6081 P50750 P50750 25 35 CDK9 Cyclin-dependent kinase 9 yes yes 2 0.0023474 138.22 By MS/MS 7 0 1 1 1291000 1291000 0 6547 951 6770 16141 11483 11483 1 23070 0 IGQKENVVVYR WNPATDAQAVDRVYRIGQKENVVVYRLITC RVYRIGQKENVVVYRLITCGTVEEKIYRRQ R I G Y R L 0 1 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 3 0 0 11 1 1303.7248 Q2NKX8 Q2NKX8 573 583 ERCC6L DNA excision repair protein ERCC-6-like yes yes 3 0.0047211 103.91 By MS/MS 3.5 0.5 1 1 2 896070 896070 0 6548 1559 6771 16142;16143 11484 11484 1 23493 0 IGQLEEQLEQEAK VKSKFKATISALEAKIGQLEEQLEQEAKER AKIGQLEEQLEQEAKERAAANKLVRRTEKK K I G A K E 1 0 0 0 0 3 4 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 13 0 1513.7624 P35580 P35580 1823 1835 MYH10 Myosin-10 yes yes 2 7.8419E-05 156.36 By MS/MS 2 0 1 1 358030 358030 0 6549 794 6772 16144 11485 11485 1 17796 0 IGQPTVSYFLK PTKILVKPDRTFEIKIGQPTVSYFLKAAAG FEIKIGQPTVSYFLKAAAGIEKGARQTGKE K I G L K A 0 0 0 0 0 1 0 1 0 1 1 1 0 1 1 1 1 0 1 1 0 0 11 0 1251.6863 Q9Y3B7 Q9Y3B7 82 92 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 0.00043332 145.46 By MS/MS 9 0 1 1 1835800 1835800 0 6550 2927 6773 16145 11486 11486 1 1053600 0 IGQQNEVR WNPHQDLQAQDRAHRIGQQNEVRVLRLCTV AQDRAHRIGQQNEVRVLRLCTVNSVEEKIL R I G V R V 0 1 1 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 942.48829 P51532;P51531 P51532 1193 1200 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 0.0027551 161.02 By MS/MS 2 0 1 1 0 0 0 6551 965 6774 16146 11487 11487 1 0 0 IGQTIGYQIR AIAVAERVAAERRERIGQTIGYQIRLESRV ERRERIGQTIGYQIRLESRVSPKTLLTFCT R I G I R L 0 1 0 0 0 2 0 2 0 3 0 0 0 0 0 0 1 0 1 0 0 0 10 0 1147.635 Q9H6S0 Q9H6S0 268 277 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.00013862 161.27 By MS/MS 3 0 1 1 1176800 1176800 0 6552 2511 6775 16147 11488 11488 1 30720 0 IGQTKPVVVYR WNPQSDLQAQDRCHRIGQTKPVVVYRLVTA RCHRIGQTKPVVVYRLVTANTIDQKIVERA R I G Y R L 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 0 1 0 1 3 0 0 11 1 1258.7398 Q9NRZ9 Q9NRZ9 711 721 HELLS Lymphoid-specific helicase yes yes 3 0.0092868 101.39 By MS/MS 4 0 1 1 615230 615230 0 6553 2619 6776 16148 11489 11489 1 16795 0 IGRIEDVTPIPSDSTR GAQSALRALARSGMKIGRIEDVTPIPSDST GRIEDVTPIPSDSTRRKGGRRGRRL_____ K I G T R R 0 2 0 2 0 0 1 1 0 3 0 0 0 0 2 2 2 0 0 1 0 0 16 1 1754.9163 P62263 P62263 126 141 RPS14 40S ribosomal protein S14 yes yes 2;3 4.6944E-07 172.33 By MS/MS By matching 10 0 3 2 1 7615500 7569100 46351 6554 1122 6777 16149;16150;16151 11490;11491 11491 2 8045200 1188900 IGRIEDVTPIPSDSTRR GAQSALRALARSGMKIGRIEDVTPIPSDST RIEDVTPIPSDSTRRKGGRRGRRL______ K I G R R K 0 3 0 2 0 0 1 1 0 3 0 0 0 0 2 2 2 0 0 1 0 0 17 2 1911.0174 P62263 P62263 126 142 RPS14 40S ribosomal protein S14 yes yes 3 0.0085605 85.636 By MS/MS 10 0 1 1 345180 345180 0 6555 1122 6778 16152 11492;11493 11492 2 366890 0 IGRNECVVVIR ELSRRRIRSINKLIRIGRNECVVVIRVDKE KLIRIGRNECVVVIRVDKEKGYIDLSKRRV R I G I R V 0 2 1 0 1 0 1 1 0 2 0 0 0 0 0 0 0 0 0 3 0 0 11 1 1313.7238 P05198 P05198 65 75 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 3 0.040263 68.786 By MS/MS 7.5 0.5 1 1 2 1833200 1833200 0 6556 471 6779 16153;16154 11494 11494 1 53904 0 IGSCTQQDVELHVQK SIVDVEGVVRKVNQKIGSCTQQDVELHVQK IGSCTQQDVELHVQKIYVISLAEPRLPLQL K I G Q K I 0 0 0 1 1 3 1 1 1 1 1 1 0 0 0 1 1 0 0 2 0 0 15 0 1740.8465 P14868 P14868 127 141 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2;3 6.0602E-63 295.26 By MS/MS By matching 6 0 3 2 1 15540000 15489000 50949 6557 594 6780 16155;16156;16157 11495;11496 11496 2 120790 156260 IGSDVELLLR NKSETSSKKIEELMKIGSDVELLLRTSVIQ EELMKIGSDVELLLRTSVIQGIHTDHNTLK K I G L R T 0 1 0 1 0 0 1 1 0 1 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1113.6394 Q5U5X0 Q5U5X0 58 67 LYRM7 Complex III assembly factor LYRM7 yes yes 2 0.00031879 152.06 By MS/MS 10 0 1 1 346480 346480 0 6558 1644 6781 16158 11497 11497 1 368270 0 IGSEGQGFLIAVR RAVIFEDCAVPVANRIGSEGQGFLIAVRGL NRIGSEGQGFLIAVRGLNGGRINIASCSLG R I G V R G 1 1 0 0 0 1 1 3 0 2 1 0 0 1 0 1 0 0 0 1 0 0 13 0 1345.7354 Q9UKU7 Q9UKU7 259 271 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 5.1425E-46 279.77 By MS/MS 8.5 1.12 1 1 1 1 4 2874000 2874000 0 6559 2816 6782 16159;16160;16161;16162 11498;11499 11498 2 178350 0 IGSESTKPPITFDK EDLNLWWAAWNTWYRIGSESTKPPITFDKL RIGSESTKPPITFDKLTFIPSQPFLTALIQ R I G D K L 0 0 0 1 0 0 1 1 0 2 0 2 0 1 2 2 2 0 0 0 0 0 14 1 1518.793 Q7Z3U7 Q7Z3U7 1250 1263 MON2 Protein MON2 homolog yes yes 3 0.032746 62.891 By MS/MS 3 0 1 1 488670 488670 0 6560 1786 6783 16163 11500 11500 1 12757 0 IGSGFDNIDIK REDLEKFKALRIIVRIGSGFDNIDIKSAGD IIVRIGSGFDNIDIKSAGDLGIAVCNVPAA R I G I K S 0 0 1 2 0 0 0 2 0 3 0 1 0 1 0 1 0 0 0 0 0 0 11 0 1177.5979 Q13363 Q13363 98 108 CTBP1 C-terminal-binding protein 1 yes yes 2 0.0017574 123.51 By MS/MS 7.5 1.12 1 1 1 1 4 10789000 10789000 0 6561 1360 6784 16164;16165;16166;16167 11501;11502 11501 2 313940 0 IGSGVER HMASSIERMGQTMERIGSGVERMGAGMGFG RMGQTMERIGSGVERMGAGMGFGLERMAAP R I G E R M 0 1 0 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 0 1 0 0 7 0 716.3817 P52272 P52272 479 485 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.045549 104.21 By MS/MS 5 0 1 1 3672500 3672500 0 6562 982 6785 16168 11503 11503 1 150960 0 IGSGYDNVDIK REDLEKFKALRVIVRIGSGYDNVDIKAAGE VIVRIGSGYDNVDIKAAGELGIAVCNIPSA R I G I K A 0 0 1 2 0 0 0 2 0 2 0 1 0 0 0 1 0 0 1 1 0 0 11 0 1179.5772 P56545 P56545 104 114 CTBP2 C-terminal-binding protein 2 yes yes 2 0.00071536 137.46 By MS/MS 6.5 0.5 1 1 2 10510000 10510000 0 6563 1047 6786 16169;16170 11504 11504 1 138870 0 IGSKENTK SKAKVNDFLAEIFKKIGSKENTKEGLAELY LAEIFKKIGSKENTKEGLAELYEYKKKYSD K I G T K E 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 1 1 0 0 0 0 0 8 1 875.47125 Q14008 Q14008 1840 1847 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.018447 153.71 By MS/MS 2 0 1 1 88105 88105 0 6564 1405 6787 16171 11505 11505 1 4379.3 0 IGSLIDVNQSK EIVIGDEHISFTTSKIGSLIDVNQSKDPEG TTSKIGSLIDVNQSKDPEGLRVFYYLVQDL K I G S K D 0 0 1 1 0 1 0 1 0 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1172.6401 Q96A72;P61326 Q96A72 106 116 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog yes no 2 0.0026087 138.76 By MS/MS 10 0 1 1 0 0 0 6565 2119 6788 16172 11506 11506 1 0 0 IGSTSGAEAANK PPRPPSRRGRTIPDKIGSTSGAEAANKIIT PDKIGSTSGAEAANKIITVPVFHLFHKLLA K I G N K I 3 0 1 0 0 0 1 2 0 1 0 1 0 0 0 2 1 0 0 0 0 0 12 0 1104.5411 Q9NR09 Q9NR09 3947 3958 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 6.1976E-11 201.61 By MS/MS 1.5 0.5 1 1 2 409540 409540 0 6566 2596 6789 16173;16174 11507 11507 1 20132 0 IGSYLSASTR EQGPIRCNTTVCLGKIGSYLSASTRHRVLT VCLGKIGSYLSASTRHRVLTSAFSRATRDP K I G T R H 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 3 1 0 1 0 0 0 10 0 1053.5455 Q96KG9 Q96KG9 455 464 SCYL1 N-terminal kinase-like protein yes yes 2 0.00097839 123.86 By MS/MS 4 0 1 1 960670 960670 0 6567 2220 6790 16175 11508 11508 1 26225 0 IGVDLIMK FTPLTVKYAYYDTERIGVDLIMKTCFSPNR AYYDTERIGVDLIMKTCFSPNRVIGLSSDL R I G M K T 0 0 0 1 0 0 0 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 8 0 887.51502 O00303 O00303 247 254 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.0061926 122.13 By MS/MS By matching 6.8 0.4 1 4 4 1 15153000 15111000 42118 6568 88 6791;6792 16176;16177;16178;16179;16180 11509;11510;11511 11511 52 3 247410 172900 IGVLDEGK RRLFEGNALLRRLVRIGVLDEGKMKLDYIL LLRRLVRIGVLDEGKMKLDYILGLKIEDFL R I G G K M 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 829.45453 P46781 P46781 84 91 RPS9 40S ribosomal protein S9 yes yes 2 0.018258 109.01 By MS/MS 9 0.816 1 1 1 3 8411900 8411900 0 6569 887 6793 16181;16182;16183 11512 11512 1 4599600 0 IGVNQPK LADSYLDEGFLLDKKIGVNQPKRIENAKIL EGFLLDKKIGVNQPKRIENAKILIANTGMD K I G P K R 0 0 1 0 0 1 0 1 0 1 0 1 0 0 1 0 0 0 0 1 0 0 7 0 754.43374 P78371 P78371 224 230 CCT2 T-complex protein 1 subunit beta yes yes 2 0.044485 104.94 By MS/MS 6.4 1.85 1 1 1 1 1 5 114000000 114000000 0 6570 1195 6794 16184;16185;16186;16187;16188 11513 11513 1 1469400 0 IGVVGGSDFEK KEMDDFLQKLRQKIKIGVVGGSDFEKVQEQ QKIKIGVVGGSDFEKVQEQLGNDVVEKYDY K I G E K V 0 0 0 1 0 0 1 3 0 1 0 1 0 1 0 1 0 0 0 2 0 0 11 0 1106.5608 O15305 O15305 41 51 PMM2 Phosphomannomutase 2 yes yes 2 0.022323 87.258 By MS/MS 8 0 1 1 2393100 2393100 0 6571 168 6795 16189 11514 11514 1 157870 0 IGYSSPLTLSDQSSK LELTAEISCFTYGCRIGYSSPLTLSDQSSK IGYSSPLTLSDQSSKIKKGSKGDCTVLKPT R I G S K I 0 0 0 1 0 1 0 1 0 1 2 1 0 0 1 5 1 0 1 0 0 0 15 0 1581.7886 O60488 O60488 340 354 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 2 0.003709 122.52 By MS/MS 5 0 1 1 2742200 2742200 0 6572 248 6796 16190 11515 11515 1 112720 0 IGYSSPQTLADQSSK LELSAELVCLSHGCRIGYSSPQTLADQSSK IGYSSPQTLADQSSKIKKGSKGDTSMLKPT R I G S K I 1 0 0 1 0 2 0 1 0 1 1 1 0 0 1 4 1 0 1 0 0 0 15 0 1580.7682 O95573 O95573 349 363 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 9.7512E-11 194.06 By MS/MS By MS/MS 4.14 2.03 1 1 1 2 1 1 6 1 13852000 13817000 35644 6573 400 6797 16191;16192;16193;16194;16195;16196;16197 11516;11517;11518;11519 11518 4 494370 105470 IHAGPITK HIDLPNEQARLDILKIHAGPITKHGEIDYE ARLDILKIHAGPITKHGEIDYEAIVKLSDG K I H T K H 1 0 0 0 0 0 0 1 1 2 0 1 0 0 1 0 1 0 0 0 0 0 8 0 835.49159 P62333 P62333 315 322 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.01622 111.65 By MS/MS By matching 7 0 2 1 1 10514000 10502000 11473 6574 1133 6798 16198;16199 11520 11520 1 187680 47097 IHDPQLLTER DMFMRGEEILSGAQRIHDPQLLTERALHHG SGAQRIHDPQLLTERALHHGIDLEKIKAYI R I H E R A 0 1 0 1 0 1 1 0 1 1 2 0 0 0 1 0 1 0 0 0 0 0 10 0 1220.6513 P14868 P14868 432 441 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.0021473 109.79 By MS/MS By MS/MS 6 0 2 1 1 2200300 2174500 25838 6575 594 6799 16200;16201 11521;11522 11522 2 16957 79244 IHDVLCK EVAIDCYEKYKVLPRIHDVLCKLVEKGETD EKYKVLPRIHDVLCKLVEKGETDLIQKAMD R I H C K L 0 0 0 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 883.45857 P42704 P42704 858 864 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.020731 124.37 By MS/MS 3.5 1.12 1 1 1 1 4 24927000 24927000 0 6576 854 6800 16202;16203;16204;16205 11523 11523 1 665840 0 IHEDTKEINEK ELQKRIAEMETQKEKIHEDTKEINEKSNIL QKEKIHEDTKEINEKSNILSNEMKAKNKDV K I H E K S 0 0 1 1 0 0 3 0 1 2 0 2 0 0 0 0 1 0 0 0 0 0 11 1 1354.6729 Q9NTJ3 Q9NTJ3 344 354 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.028058 73.666 By MS/MS 3 0 1 1 762600 762600 0 6577 2630 6801 16206 11524 11524 1 19908 0 IHEGCEEPATHNALAK KRNRLKLLLPWLEARIHEGCEEPATHNALA HEGCEEPATHNALAKIYIDSNNNPERFLRE R I H A K I 3 0 1 0 1 0 3 1 2 1 1 1 0 0 1 0 1 0 0 0 0 0 16 0 1775.8261 Q00610 Q00610 866 881 CLTC Clathrin heavy chain 1 yes yes 3 0.00016417 125.47 By MS/MS 2 0.816 1 1 1 3 3507600 3507600 0 6578 1235 6802 16207;16208;16209 11525;11526;11527 11525 3 125770 0 IHEPIMLK LYDVMKSKKHRTWQKIHEPIMLKYLELCVD KHRTWQKIHEPIMLKYLELCVDLRKSHLAK K I H L K Y 0 0 0 0 0 0 1 0 1 2 1 1 1 0 1 0 0 0 0 0 0 0 8 0 979.55247 Q14152 Q14152 46 53 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.023083 102.77 By MS/MS 3 0 1 1 476860 476860 0 6579 1409 6803 16210 11528 11528 1 12449 0 IHFHNLQGEK SRIVNVSSLAHHLGRIHFHNLQGEKFYNAG HHLGRIHFHNLQGEKFYNAGLAYCHSKLAN R I H E K F 0 0 1 0 0 1 1 1 2 1 1 1 0 1 0 0 0 0 0 0 0 0 10 0 1221.6255 Q8TC12 Q8TC12 185 194 RDH11 Retinol dehydrogenase 11 yes yes 2;3 0.00044793 137.13 By MS/MS 8 0 2 2 8092100 8092100 0 6580 1992 6804 16211;16212 11529;11530 11529 2 533830 0 IHFPLATYAPVISAEK VDLTEFQTNLVPYPRIHFPLATYAPVISAE HFPLATYAPVISAEKAYHEQLSVAEITNAC R I H E K A 3 0 0 0 0 0 1 0 1 2 1 1 0 1 2 1 1 0 1 1 0 0 16 0 1755.956 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 265 280 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3 9.6177E-11 207.95 By MS/MS 5.67 0.471 1 2 3 392080000 392080000 0 6581 1185;1754;2314;1186 6805 16213;16214;16215 11531;11532;11533;11534;11535;11536 11532 6 3059600 0 IHHSGAK IVDAEWNILYDKLEKIHHSGAKVVLSKLPI ILYDKLEKIHHSGAKVVLSKLPIGDVATQY K I H A K V 1 0 0 0 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 748.39802 Q99832 Q99832 281 287 CCT7 T-complex protein 1 subunit eta yes yes 2 0.042356 106.42 By MS/MS 5 1.41 1 1 1 1 1 5 6166700 6166700 0 6582 2295 6806 16216;16217;16218;16219;16220 11537 11537 1 53623 0 IHIDLPNEQAR TLDPALLRPGRLDRKIHIDLPNEQARLDIL LDRKIHIDLPNEQARLDILKIHAGPITKHG K I H A R L 1 1 1 1 0 1 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 11 0 1304.6837 P62333 P62333 299 309 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.041537 84.687 By MS/MS 7.5 0.5 1 1 2 4301300 4301300 0 6583 1133 6807 16221;16222 11538 11538 1 87366 0 IHLAQSLHK KKEHDPVGQMVNNPKIHLAQSLHKLSTACP MVNNPKIHLAQSLHKLSTACPGRVPSMVST K I H H K L 1 0 0 0 0 1 0 0 2 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1045.6033 P55060 P55060 926 934 CSE1L Exportin-2 yes yes 2;3 8.7177E-05 155.58 By MS/MS 4 0 2 2 3492800 3492800 0 6584 1025 6808 16223;16224 11539;11540 11539 2 95351 0 IHMGSCAENTAK EDLIVKDGLTDVYNKIHMGSCAENTAKKLN YNKIHMGSCAENTAKKLNIARNEQDAYAIN K I H A K K 2 0 1 0 1 0 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 0 12 0 1317.5806 P24752 P24752 191 202 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2;3 0.00074851 132.25 By MS/MS 7 0 3 3 2794900 2794900 0 6585 680 6809;6810 16225;16226;16227 11541;11542;11543 11541 455 3 49945 0 IHNAELQR DLVLNGNEIGGGSIRIHNAELQRYILATLL IGGGSIRIHNAELQRYILATLLKEDVKMLS R I H Q R Y 1 1 1 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 979.51993 Q6PI48 Q6PI48 543 550 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2;3 0.0039152 125.81 By MS/MS 6 0.816 2 2 2 6 6875700 6875700 0 6586 1715 6811 16228;16229;16230;16231;16232;16233 11544;11545 11545 2 262960 0 IHNAENIQPGEQK RPEEADETWDSKEDKIHNAENIQPGEQKYE DKIHNAENIQPGEQKYEYKSDQWKPLNLEE K I H Q K Y 1 0 2 0 0 2 2 1 1 2 0 1 0 0 1 0 0 0 0 0 0 0 13 0 1476.7321 Q04637 Q04637 581 593 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0016021 155.33 By MS/MS 2.5 0.5 2 2 4 9394300 9394300 0 6587 1264 6812 16234;16235;16236;16237 11546;11547;11548;11549 11548 3 457400 0 IHPQTIIAGWR AAELLREAESLIAKKIHPQTIIAGWREATK IAKKIHPQTIIAGWREATKAAREALLSSAV K I H W R E 1 1 0 0 0 1 0 1 1 3 0 0 0 0 1 0 1 1 0 0 0 0 11 0 1290.7197 P78371 P78371 121 131 CCT2 T-complex protein 1 subunit beta yes yes 2 0.025032 84.817 By MS/MS 6 0 1 1 32277000 32277000 0 6588 1195 6813 16238 11550;11551 11551 2 251700 0 IHPTSVISGYR AAELLKNADELVKQKIHPTSVISGYRLACK VKQKIHPTSVISGYRLACKEAVRYINENLI K I H Y R L 0 1 0 0 0 0 0 1 1 2 0 0 0 0 1 2 1 0 1 1 0 0 11 0 1228.6564 P17987 P17987 112 122 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.0031724 104.43 By MS/MS 6 0 1 1 19050000 19050000 0 6589 619 6814 16239 11552 11552 1 148560 0 IHSDCAANQQVTYR CREGEDNSKRNPIAKIHSDCAANQQVTYRI KIHSDCAANQQVTYRISGVGIDQPPYGIFV K I H Y R I 2 1 1 1 1 2 0 0 1 1 0 0 0 0 0 1 1 0 1 1 0 0 14 0 1661.758 Q02413 Q02413 73 86 DSG1 Desmoglein-1 yes yes 3 0.0067797 90.759 By matching By MS/MS 4.25 0.829 1 1 2 1 3 954470 684640 269830 6590 1253 6815 16240;16241;16242;16243 11553 11553 1 28141 601900 IHSDLAEER LREGEDLSKKNPIAKIHSDLAEERGLKITY KNPIAKIHSDLAEERGLKITYKYTGKGITE K I H E R G 1 1 0 1 0 0 2 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1068.52 Q14126 Q14126 73 81 DSG2 Desmoglein-2 yes yes 2 0.046101 82.452 By MS/MS 3 0 1 1 170190 170190 0 6591 1407 6816 16244 11554 11554 1 4442.9 0 IHTAPAR LRKLPFRAFRTDARKIHTAPARTMFLLRPL AFRTDARKIHTAPARTMFLLRPLPILLVTG K I H A R T 2 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 7 0 764.42932 Q9UG56 Q9UG56 53 59 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.017424 133.47 By MS/MS 7.5 0.5 1 1 2 588590 588590 0 6592 2770 6817 16245;16246 11555 11555 1 30136 0 IHVLEAQDLIAK HTTPDSQFGTEHVLRIHVLEAQDLIAKDRF VLRIHVLEAQDLIAKDRFLGGLVKGKSDPY R I H A K D 2 0 0 1 0 1 1 0 1 2 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1348.7715 Q9BSJ8 Q9BSJ8 651 662 ESYT1 Extended synaptotagmin-1 yes yes 2;3 4.3859E-11 197.73 By MS/MS 3.8 0.748 2 2 1 5 4714200 4714200 0 6593 2339 6818 16247;16248;16249;16250;16251 11556;11557;11558 11557 3 126980 0 IHVLEAQDLIAKDR HTTPDSQFGTEHVLRIHVLEAQDLIAKDRF RIHVLEAQDLIAKDRFLGGLVKGKSDPYVK R I H D R F 2 1 0 2 0 1 1 0 1 2 2 1 0 0 0 0 0 0 0 1 0 0 14 1 1619.8995 Q9BSJ8 Q9BSJ8 651 664 ESYT1 Extended synaptotagmin-1 yes yes 3 0.037154 61.641 By MS/MS 3.5 0.5 1 1 2 1956000 1956000 0 6594 2339 6819 16252;16253 11559 11559 1 52004 0 IIADIFEYTAK MVRNTYIFPPEPSMKIIADIFEYTAKHMPK PSMKIIADIFEYTAKHMPKFNSISISGYHM K I I A K H 2 0 0 1 0 0 1 0 0 3 0 1 0 1 0 0 1 0 1 0 0 0 11 0 1282.6809 P22033 P22033 241 251 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.00010431 161.17 By MS/MS 5 1.87 1 1 1 1 4 3906600 3906600 0 6595 653 6820 16254;16255;16256;16257 11560;11561;11562;11563;11564 11563 5 124160 0 IIAEGANGPTTPEADKIFLER EKQLTKSNAPRVKAKIIAEGANGPTTPEAD NGPTTPEADKIFLERNIMVIPDLYLNAGGV K I I E R N 3 1 1 1 0 0 3 2 0 3 1 1 0 1 2 0 2 0 0 0 0 0 21 1 2241.1641 P00367;P49448 P00367 400 420 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2;3 0.00034658 112.24 By MS/MS 6 0 2 2 48663000 48663000 0 6596 425 6821 16258;16259 11565;11566 11565 2 379470 0 IIAFVGSPVEDNEK HLALKHRQGKNHKMRIIAFVGSPVEDNEKD RIIAFVGSPVEDNEKDLVKLAKRLKKEKVN R I I E K D 1 0 1 1 0 0 2 1 0 2 0 1 0 1 1 1 0 0 0 2 0 0 14 0 1516.7773 P55036 P55036 109 122 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2 2.2922E-12 208.15 By MS/MS By matching 7 1.22 2 1 1 3 1 4751700 4712400 39285 6597 1023 6822 16260;16261;16262;16263 11567;11568;11569 11569 3 259970 120480 IIAFVGSPVEDNEKDLVK HLALKHRQGKNHKMRIIAFVGSPVEDNEKD FVGSPVEDNEKDLVKLAKRLKKEKVNVDII R I I V K L 1 0 1 2 0 0 2 1 0 2 1 2 0 1 1 1 0 0 0 3 0 0 18 1 1972.0517 P55036 P55036 109 126 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2;3 8.9582E-10 183.06 By MS/MS 6.5 0.5 2 2 4 31618000 31618000 0 6598 1023 6823 16264;16265;16266;16267 11570;11571;11572 11571 3 267850 0 IIAGDKEVVIAQNDKHTGPVR AGGENGNIILYDPSKIIAGDKEVVIAQNDK EVVIAQNDKHTGPVRALDVNIFQTNLVASG K I I V R A 2 1 1 2 0 1 1 2 1 3 0 2 0 0 1 0 1 0 0 3 0 0 21 2 2259.2335 O94979 O94979 106 126 SEC31A Protein transport protein Sec31A yes yes 4 0.041402 46.209 By MS/MS 3 0 1 1 671070 671070 0 6599 362 6824 16268 11573 11573 1 17518 0 IIAHAQLLEQHR ELTRIDRWFLHRMKRIIAHAQLLEQHRGQP MKRIIAHAQLLEQHRGQPLPPDLLQQAKCL R I I H R G 2 1 0 0 0 2 1 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1427.7997 P27708 P27708 843 854 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 3 0.00028405 138.75 By MS/MS 1 0 1 1 334570 334570 0 6600 709 6825 16269 11574 11574 1 16347 0 IIAINSELTQPK LFDRLRDENPDFREKIIAINSELTQPKLAL REKIIAINSELTQPKLALSEEDKEVIIDST K I I P K L 1 0 1 0 0 1 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1325.7555 Q8WVX9 Q8WVX9 79 90 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 6.8904E-33 257.72 By MS/MS By MS/MS 5.6 2.87 1 1 1 1 2 1 1 1 1 9 1 27791000 27652000 138790 6601 2036 6826 16270;16271;16272;16273;16274;16275;16276;16277;16278;16279 11575;11576;11577;11578;11579;11580 11579 6 910850 425660 IIANALSSEPACLAEIEEDK LAFRDQNILLGTTYRIIANALSSEPACLAE LSSEPACLAEIEEDKARRILELSGSSSEDS R I I D K A 4 0 1 1 1 0 4 0 0 3 2 1 0 0 1 2 0 0 0 0 0 0 20 0 2172.062 P78527 P78527 3336 3355 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.2127E-31 220.72 By MS/MS 2.5 1.12 1 1 1 1 4 2155300 2155300 0 6602 1197 6827 16280;16281;16282;16283 11581;11582;11583;11584 11583 4 71912 0 IIANALSSEPACLAEIEEDKAR LAFRDQNILLGTTYRIIANALSSEPACLAE SEPACLAEIEEDKARRILELSGSSSEDSEK R I I A R R 5 1 1 1 1 0 4 0 0 3 2 1 0 0 1 2 0 0 0 0 0 0 22 1 2399.2002 P78527 P78527 3336 3357 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.00011503 95.307 By MS/MS 2.5 1.12 1 1 1 1 4 3613100 3613100 0 6603 1197 6828 16284;16285;16286;16287 11585;11586;11587;11588;11589 11589 5 119910 0 IIAPPERK QKEITALAPSTMKIKIIAPPERKYSVWIGG PSTMKIKIIAPPERKYSVWIGGSILASLST K I I R K Y 1 1 0 0 0 0 1 0 0 2 0 1 0 0 2 0 0 0 0 0 0 0 8 1 922.56 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P60709 329 336 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 3 0.048849 81.191 By MS/MS By matching 7 0.816 1 1 1 2 1 10889000 10872000 16933 6604 1072;1179;1593 6829 16288;16289;16290 11590 11590 1 201410 51934 IIAQCLNK DRYLCRVEEMRQSLRIIAQCLNKMPPGEIK EMRQSLRIIAQCLNKMPPGEIKVDDAKVSP R I I N K M 1 0 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 8 0 958.52699 O75306 O75306 343 350 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.00043585 185.22 By MS/MS 7.67 1.7 1 1 1 3 23236000 23236000 0 6605 294 6830 16291;16292;16293 11591;11592 11591 2 509620 0 IIASSPEMNLPTVSALR LARGFTAAGILSAHKIIASSPEMNLPTVSA ASSPEMNLPTVSALRKMGVNLTRSNKETVK K I I L R K 2 1 1 0 0 0 1 0 0 2 2 0 1 0 2 3 1 0 0 1 0 0 17 0 1797.9659 Q96C36 Q96C36 30 46 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2;3 8.8105E-14 180.95 By MS/MS 6.57 3.29 1 1 3 1 1 7 34969000 34969000 0 6606 2136 6831;6832 16294;16295;16296;16297;16298;16299;16300 11593;11594;11595;11596;11597;11598;11599 11595 1387 7 2725500 0 IIATCGELLR SLFQEDWTAFQNSIRIIATCGELLRHCGDF QNSIRIIATCGELLRHCGDFEQQLANRILS R I I L R H 1 1 0 0 1 0 1 1 0 2 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1144.6274 P83436 P83436 471 480 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 2 3.4876E-07 191.17 By MS/MS 4.5 0.5 1 1 2 1615200 1615200 0 6607 1212 6833 16301;16302 11600 11600 1 63653 0 IIATVLMTEDIK GPRRSQQGPRKEPRKIIATVLMTEDIKLNK PRKIIATVLMTEDIKLNKAEKAWKPSSKRT K I I I K L 1 0 0 1 0 0 1 0 0 3 1 1 1 0 0 0 2 0 0 1 0 0 12 0 1345.7527 Q04637 Q04637 715 726 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 5.1871E-17 227.27 By MS/MS 1.67 0.471 1 2 3 2567800 2567800 0 6608 1264 6834;6835 16303;16304;16305 11601;11602 11601 1024 2 127570 0 IICDLVEEK AEGIAWEPVQYFNNKIICDLVEEKFKGIIS QYFNNKIICDLVEEKFKGIISILDEECLRP K I I E K F 0 0 0 1 1 0 2 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1117.5689 O00159 O00159 478 486 MYO1C Unconventional myosin-Ic yes yes 2 0.00091248 144.09 By MS/MS 4 0 1 1 4173800 4173800 0 6609 72 6836 16306 11603 11603 1 113940 0 IICQGFTGK YTASRQHLYVDKNTKIICQGFTGKQGTFHS VDKNTKIICQGFTGKQGTFHSQQALEYGTK K I I G K Q 0 0 0 0 1 1 0 2 0 2 0 1 0 1 0 0 1 0 0 0 0 0 9 0 1022.5219 P53597 P53597 58 66 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.0092599 106.42 By MS/MS 8.5 0.5 1 1 2 8596800 8596800 0 6610 1002 6837 16307;16308 11604 11604 1 661220 0 IIDAALR GINTLVTYDMVPEPKIIDAALRACRRLNDF YDMVPEPKIIDAALRACRRLNDFASTVRIL K I I L R A 2 1 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 770.46504 P20674 P20674 88 94 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 0.040889 107.43 By MS/MS 10 0 1 1 2197000 2197000 0 6611 644 6838 16309 11605 11605 1 2335100 0 IIDEDGLLNLIR SGQSKSDKAAALGTKIIDEDGLLNLIRTMP GTKIIDEDGLLNLIRTMPGKKSKYEIAVET K I I I R T 0 1 1 2 0 0 1 1 0 3 3 0 0 0 0 0 0 0 0 0 0 0 12 0 1382.7769 P35251 P35251 469 480 RFC1 Replication factor C subunit 1 yes yes 2 8.1264E-09 195.36 By MS/MS 3.5 0.5 1 1 2 423940 423940 0 6612 787 6839 16310;16311 11606 11606 1 11179 0 IIDEVVNK IRNPQQQESLKHATRIIDEVVNKFLDDLGN SLKHATRIIDEVVNKFLDDLGNAKSHLMSL R I I N K F 0 0 1 1 0 0 1 0 0 2 0 1 0 0 0 0 0 0 0 2 0 0 8 0 928.52295 O95816 O95816 116 123 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 0.036889 96.492 By MS/MS 9 0.816 1 1 1 3 1220300 1220300 0 6613 408 6840 16312;16313;16314 11607 11607 1 545790 0 IIDGLLVMR SKCDWLDGKHVVFGKIIDGLLVMRKIENVP HVVFGKIIDGLLVMRKIENVPTGPNNKPKL K I I M R K 0 1 0 1 0 0 0 1 0 2 2 0 1 0 0 0 0 0 0 1 0 0 9 0 1028.6052 O43447 O43447 144 152 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.00036412 152.63 By MS/MS 10 0 1 1 844670 844670 0 6614 201 6841 16315 11608 11608 119 1 897800 0 IIDISDVFR ATYGTDKPDTRFGMKIIDISDVFRNTEIGF TRFGMKIIDISDVFRNTEIGFLQDALSKPH K I I F R N 0 1 0 2 0 0 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1076.5866 Q6PI48 Q6PI48 341 349 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.0024484 124.98 By MS/MS 6.5 1.12 1 1 1 1 4 14673000 14673000 0 6615 1715 6842 16316;16317;16318;16319 11609;11610;11611;11612 11609 4 575630 0 IIDKEGDDYEVIPNSNFYVSR HKDIQSCTVEVHFQKIIDKEGDDYEVIPNS DDYEVIPNSNFYVSRTACRDNTSVYHISGK K I I S R T 0 1 2 3 0 0 2 1 0 3 0 1 0 1 1 2 0 0 2 2 0 0 21 1 2472.1809 Q9NTJ3 Q9NTJ3 167 187 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.00065779 88.036 By MS/MS 3 0 1 1 1324300 1324300 0 6616 2630 6843 16320 11613 11613 1 34570 0 IIDLVLQK DHKEITQQLENICLRIIDLVLQKHVIEFYE LENICLRIIDLVLQKHVIEFYEEILSLAYS R I I Q K H 0 0 0 1 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 8 0 940.59572 O15397 O15397 639 646 IPO8 Importin-8 yes yes 2 0.0045391 138.83 By MS/MS 4.5 0.5 1 1 2 3136500 3136500 0 6617 175 6844 16321;16322 11614 11614 1 87154 0 IIDVVYNASNNELVR GNFSWGSECCTRKTRIIDVVYNASNNELVR IIDVVYNASNNELVRTKTLVKNCIVLIDST R I I V R T 1 1 3 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 1 3 0 0 15 0 1717.8999 P62241 P62241 78 92 RPS8 40S ribosomal protein S8 yes yes 2;3 6.093E-21 228.7 By MS/MS 8.2 0.748 1 2 2 5 18524000 18524000 0 6618 1118 6845 16323;16324;16325;16326;16327 11615;11616;11617;11618 11615 4 2976800 0 IIEAMGFTGPLK DSPQPVEEKVGAFTKIIEAMGFTGPLKYSK FTKIIEAMGFTGPLKYSKWKIKIAALRMYT K I I L K Y 1 0 0 0 0 0 1 2 0 2 1 1 1 1 1 0 1 0 0 0 0 0 12 0 1275.6897 Q9NVA1 Q9NVA1 96 107 UQCC1 Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes yes 2 0.00093428 129.16 By MS/MS 9 0 1 1 2045400 2045400 0 6619 2646 6846 16328 11619 11619 1564 1 1173900 0 IIEDCSNSEETVK NVADILFVRTSYVKKIIEDCSNSEETVKLL KKIIEDCSNSEETVKLLRFCCWENPQFSST K I I V K L 0 0 1 1 1 0 3 0 0 2 0 1 0 0 0 2 1 0 0 1 0 0 13 0 1522.6821 Q93008 Q93008 2289 2301 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 1.9263E-17 234.24 By MS/MS 3 1.41 1 1 1 1 1 5 5151700 5151700 0 6620 2096 6847 16329;16330;16331;16332;16333 11620;11621;11622 11621 3 227390 0 IIEEAPAPGIK YLFERDCSVQRRHQKIIEEAPAPGIKSEVR RHQKIIEEAPAPGIKSEVRKKLGEAAVRAA K I I I K S 2 0 0 0 0 0 2 1 0 3 0 1 0 0 2 0 0 0 0 0 0 0 11 0 1136.6441 Q96RQ3 Q96RQ3 285 295 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 0.00078207 136.57 By MS/MS 5.5 0.5 1 1 2 5664200 5664200 0 6621 2249 6848 16334;16335 11623 11623 1 195490 0 IIEGLQDLDDDVR RQDVINTLLPKVLTRIIEGLQDLDDDVRAV TRIIEGLQDLDDDVRAVAAASLVPVVESLV R I I V R A 0 1 0 4 0 1 1 1 0 2 2 0 0 0 0 0 0 0 0 1 0 0 13 0 1499.7468 O14981 O14981 435 447 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 3.7581E-06 175.48 By MS/MS 2.5 0.5 1 1 2 881910 881910 0 6622 143 6849 16336;16337 11624;11625 11625 2 30550 0 IIEGTEVVQEIQNK VAGSTSSPSVSYYRKIIEGTEVVQEIQNKQ KIIEGTEVVQEIQNKQKVGPSDDTPRRGPE K I I N K Q 0 0 1 0 0 2 3 1 0 3 0 1 0 0 0 0 1 0 0 2 0 0 14 0 1598.8516 Q99570 Q99570 1294 1307 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 2 5.9216E-18 253.97 By MS/MS 3 0 1 1 609390 609390 0 6623 2273 6850 16338 11626 11626 1 15908 0 IIENELEGFGIR ILIVLDVLKPLGHKKIIENELEGFGIRLNS HKKIIENELEGFGIRLNSKPPNIGFKKKDK K I I I R L 0 1 1 0 0 0 3 2 0 3 1 0 0 1 0 0 0 0 0 0 0 0 12 0 1388.73 Q9Y295 Q9Y295 160 171 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2 3.898E-11 206.36 By MS/MS 7 0 1 1 3433800 3433800 0 6624 2880 6851 16339 11627 11627 1 61362 0 IIETLTQQLQAK EVLPALENNKEQIQKIIETLTQQLQAKGKE IQKIIETLTQQLQAKGKELNEFREKHNIRL K I I A K G 1 0 0 0 0 3 1 0 0 2 2 1 0 0 0 0 2 0 0 0 0 0 12 0 1384.7926 Q9UHV9 Q9UHV9 100 111 PFDN2 Prefoldin subunit 2 yes yes 2 1.1387E-43 275.13 By MS/MS 9.5 0.5 1 1 2 3973200 3973200 0 6625 2783 6852 16340;16341 11628;11629 11628 2 3839700 0 IIEVGDTPKDR IVTSGLIMQLLAGAKIIEVGDTPKDRALFN AGAKIIEVGDTPKDRALFNGAQKLFGMIIT K I I D R A 0 1 0 2 0 0 1 1 0 2 0 1 0 0 1 0 1 0 0 1 0 0 11 1 1241.6616 P61619 P61619 99 109 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 2;3 0.022535 109.44 By MS/MS 2.5 1.12 2 2 2 2 8 4198200 4198200 0 6626 1103 6853 16342;16343;16344;16345;16346;16347;16348;16349 11630;11631;11632 11632 3 178170 0 IIEVNQNQK KTKYIKFTGNQIQNRIIEVNQNQKQVEQDI NQIQNRIIEVNQNQKQVEQDIKVAIFTLMV R I I Q K Q 0 0 2 0 0 2 1 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 9 0 1084.5877 O15164 O15164 295 303 TRIM24 Transcription intermediary factor 1-alpha yes yes 2 0.00091101 144.12 By MS/MS 3.5 0.5 1 1 2 915520 915520 0 6627 156 6854 16350;16351 11633;11634 11633 2 24377 0 IIEVSGQK MADCPHTIGVEFGTRIIEVSGQKIKLQIWD GVEFGTRIIEVSGQKIKLQIWDTAGQERFR R I I Q K I 0 0 0 0 0 1 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 0 8 0 872.49673 P61106 P61106 52 59 RAB14 Ras-related protein Rab-14 yes yes 2 0.010309 119.29 By MS/MS 8.5 0.5 1 1 2 1253200 1253200 0 6628 1088 6855 16352;16353 11635 11635 1 517100 0 IIFKLPNDSR CLPPEPSPDDPESVKIIFKLPNDSRVERRF PESVKIIFKLPNDSRVERRFHFSQSLTVIH K I I S R V 0 1 1 1 0 0 0 0 0 2 1 1 0 1 1 1 0 0 0 0 0 0 10 1 1201.6819 Q96CS3 Q96CS3 364 373 FAF2 FAS-associated factor 2 yes yes 3 0.037109 87.806 By MS/MS 6.5 0.5 1 1 2 3783900 3783900 0 6629 2140 6856 16354;16355 11636 11636 1 31540 0 IIFVDADQIVR KILFLDVLFPLAVDKIIFVDADQIVRHDLK AVDKIIFVDADQIVRHDLKELRDFDLDGAP K I I V R H 1 1 0 2 0 1 0 0 0 3 0 0 0 1 0 0 0 0 0 2 0 0 11 0 1287.7187 Q9NYU1 Q9NYU1 1329 1339 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 0.00019719 155.06 By MS/MS 3.5 0.5 1 1 2 783770 783770 0 6630 2698 6857 16356;16357 11637 11637 1 20552 0 IIFVDEVFK YANVVLGDDSLNDCRIIFVDEVFKIERPGE SLNDCRIIFVDEVFKIERPGEGSPMVDNPM R I I F K I 0 0 0 1 0 0 1 0 0 2 0 1 0 2 0 0 0 0 0 2 0 0 9 0 1108.6168 Q96T88 Q96T88 271 279 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 2 0.051439 90.657 By MS/MS 4 0 1 1 412150 412150 0 6631 2262 6858 16358 11638 11638 1 11251 0 IIGAQAGK I I G K 2 0 0 0 0 1 0 2 0 2 0 1 0 0 0 0 0 0 0 0 0 0 8 0 756.44939 REV__Q9BTC0 yes yes 2 0.0087856 122.98 By MS/MS 2.33 0.471 2 1 3 649830 649830 0 + 6632 3041 6859 16359;16360;16361 11639 11639 1 30833 0 IIGATDSCGDLMFLMK NDIARGFERGLEPEKIIGATDSCGDLMFLM IGATDSCGDLMFLMKWKDTDEADLVLAKEA K I I M K W 1 0 0 2 1 0 0 2 0 2 2 1 2 1 0 1 1 0 0 0 0 0 16 0 1770.8354 P45973 P45973 126 141 CBX5 Chromobox protein homolog 5 yes yes 2 6.431E-11 186.46 By MS/MS 9 0 1 1 322180 322180 0 6633 872 6860 16362 11640 11640 623;624 1 184900 0 IIGATDSSGELMFLMK ADKPRGFARGLDPERIIGATDSSGELMFLM IGATDSSGELMFLMKWKDSDEADLVLAKEA R I I M K W 1 0 0 1 0 0 1 2 0 2 2 1 2 1 0 2 1 0 0 0 0 0 16 0 1711.8525 Q13185;P83916 Q13185 126 141 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 yes no 2 8.4216E-30 246.56 By MS/MS 9 0 1 1 2104200 2104200 0 6634 1344 6861 16363 11641 11641 1050;1051 1 1207600 0 IIGELNKENDR IPVPVGISVTDENGKIIGELNKENDRILVA ENGKIIGELNKENDRILVAQGGLGGKLLTN K I I D R I 0 1 2 1 0 0 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1299.6783 A4D1E9 A4D1E9 105 115 GTPBP10 GTP-binding protein 10 yes yes 2 0.030718 111.27 By MS/MS 7 0 1 1 1805600 1805600 0 6635 14 6862 16364 11642 11642 1 32267 0 IIGIMEEVADGFK IDFLSALEGFKVMCKIIGIMEEVADGFKSK CKIIGIMEEVADGFKSKILKQVISLQTKNP K I I F K S 1 0 0 1 0 0 2 2 0 3 0 1 1 1 0 0 0 0 0 1 0 0 13 0 1420.7272 P52701 P52701 871 883 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.0088437 121.36 By MS/MS 3 0 1 1 88963 88963 0 6636 989 6863 16365 11643 11643 1 2322.4 0 IIGLDQVAGMSETALPGAFK SSDKFVSELWKDVDRIIGLDQVAGMSETAL QVAGMSETALPGAFKTRKGMFRTVGQLYKE R I I F K T 3 0 0 1 0 1 1 3 0 2 2 1 1 1 1 1 1 0 0 1 0 0 20 0 2017.0554 P35579 P35579 618 637 MYH9 Myosin-9 yes yes 2 0.041042 57.159 By MS/MS 2 0 1 1 272560 272560 0 6637 793 6864 16366 11644 11644 538 1 13548 0 IIHGAGYSEEDKR GTGESGKSTFIKQMRIIHGAGYSEEDKRGF MRIIHGAGYSEEDKRGFTKLVYQNIFTAMQ R I I K R G 1 1 0 1 0 0 2 2 1 2 0 1 0 0 0 1 0 0 1 0 0 0 13 1 1473.7212 P29992 P29992 61 73 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 3 0.027699 92.792 By MS/MS 7 0 1 1 478560 478560 0 6638 727 6865 16367 11645 11645 1 8551.9 0 IIHGQDFDQR GAGESGKSTFLKQMRIIHGQDFDQRAREEF LKQMRIIHGQDFDQRAREEFRPTIYSNVIK R I I Q R A 0 1 0 2 0 2 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 10 0 1227.5996 Q14344 Q14344 70 79 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes yes 3 0.03838 78.513 By MS/MS 7 0 1 1 1668800 1668800 0 6639 1430 6866 16368 11646 11646 1 29821 0 IIHSSVQK RTFIGIFLIDGVTGRIIHSSVQKKAKGPVH IDGVTGRIIHSSVQKKAKGPVHIVHSENWV R I I Q K K 0 0 0 0 0 1 0 0 1 2 0 1 0 0 0 2 0 0 0 1 0 0 8 0 910.52362 Q8N766 Q8N766 769 776 EMC1 ER membrane protein complex subunit 1 yes yes 3 0.040181 82.241 By MS/MS 1.5 0.5 1 1 2 246870 246870 0 6640 1931 6867 16369;16370 11647 11647 1 12120 0 IIIAEVVNK KNPKYKKLKDAIEEKIIIAEVVNKINRANG DAIEEKIIIAEVVNKINRANGKSTSRIFLL K I I N K I 1 0 1 0 0 0 1 0 0 3 0 1 0 0 0 0 0 0 0 2 0 0 9 0 997.61718 O43795 O43795 987 995 MYO1B Unconventional myosin-Ib yes yes 2 0.0023157 126.41 By MS/MS 4 0.816 1 1 1 3 5421300 5421300 0 6641 223 6868 16371;16372;16373 11648 11648 1 151360 0 IIIENKPK LNNQARFILEKIDGKIIIENKPKKELIKVL LEKIDGKIIIENKPKKELIKVLIQRGYDSD K I I P K K 0 0 1 0 0 0 1 0 0 3 0 2 0 0 1 0 0 0 0 0 0 0 8 1 953.59097 P11388 P11388 1063 1070 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.024656 89.752 By MS/MS 3 0 1 1 307100 307100 0 6642 553 6869 16374 11649 11649 1 8016.9 0 IIKDGEQHEDLNEVAK IVLWNIFNRMPIARKIIKDGEQHEDLNEVA IKDGEQHEDLNEVAKLFNIHED________ K I I A K L 1 0 1 2 0 1 3 1 1 2 1 2 0 0 0 0 0 0 0 1 0 0 16 1 1836.9218 O95831 O95831 591 606 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3;4 0.002222 150.26 By MS/MS 5.67 0.745 3 2 1 6 19330000 19330000 0 6643 409 6870 16375;16376;16377;16378;16379;16380 11650;11651;11652 11652 3 680520 0 IIKQPMDMGTIKR QPVDAVKLGLPDYHKIIKQPMDMGTIKRRL HKIIKQPMDMGTIKRRLENNYYWAASECMQ K I I K R R 0 1 0 1 0 1 0 1 0 3 0 2 2 0 1 0 1 0 0 0 0 0 13 2 1529.8422 P25440 P25440 116 128 BRD2 Bromodomain-containing protein 2 yes yes 2 0.050625 60.064 By MS/MS 5 0 1 1 0 0 0 6644 685 6871 16381 11653 11653 1 0 0 IILDLISESPIK VLIGGKPDRVVECIKIILDLISESPIKGRA CIKIILDLISESPIKGRAQPYDPNFYDETY K I I I K G 0 0 0 1 0 0 1 0 0 4 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1339.7963 P61978 P61978 208 219 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 5.8821E-24 242.12 By MS/MS 6 0.816 1 1 1 3 10253000 10253000 0 6645 1110 6872 16382;16383;16384 11654;11655;11656 11655 3 83293 0 IILFTEDPR EKTIYLVSFFEGLQRIILFTEDPRVFKVTY FEGLQRIILFTEDPRVFKVTYESEKAELAE R I I P R V 0 1 0 1 0 0 1 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 9 0 1102.6023 Q96RL7 Q96RL7 2498 2506 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 2 0.0092905 106.36 By MS/MS 1 0 1 1 68307 68307 0 6646 2245 6873 16385 11657 11657 1 3337.4 0 IILLAEGR IKPQVDRYRLKNGRRIILLAEGRLVNLGCA RLKNGRRIILLAEGRLVNLGCAMGHPSFVM R I I G R L 1 1 0 0 0 0 1 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 8 0 883.5491 P23526 P23526 336 343 AHCY Adenosylhomocysteinase yes yes 2 0.0090135 122.13 By MS/MS 7 0 1 1 12664000 12664000 0 6647 670 6874 16386 11658 11658 1 226300 0 IILNALVAQQK PFLTNVTLPRSGATKIILNALVAQQKNGSP GATKIILNALVAQQKNGSPAGGDAKELDSK K I I Q K N 2 0 1 0 0 2 0 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1209.7445 Q92604 Q92604 220 230 LPGAT1 Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 yes yes 2 3.0371E-08 195.06 By MS/MS 5.33 3.09 1 1 1 3 2264900 2264900 0 6648 2065 6875 16387;16388;16389 11659;11660 11659 1 53770 0 IILPPEKELAMPGEDLK FMPVMFSLTWDMACRIILPPEKELAMPGED LPPEKELAMPGEDLKFNLILRQPMILEKGQ R I I L K F 1 0 0 1 0 0 3 1 0 2 3 2 1 0 3 0 0 0 0 0 0 0 17 1 1892.0329 P49411 P49411 389 405 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.018091 70.41 By MS/MS 7.5 0.5 2 2 4 15621000 15621000 0 6649 918 6876;6877 16390;16391;16392;16393 11661;11662 11661 681 2 331420 0 IIMPPSALDQLSR LAGPNDRSDVEKGGKIIMPPSALDQLSRLN GKIIMPPSALDQLSRLNITYPMLFKLTNKN K I I S R L 1 1 0 1 0 1 0 0 0 2 2 0 1 0 2 2 0 0 0 0 0 0 13 0 1439.7806 Q92890 Q92890 46 58 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.021245 78.692 By MS/MS 6.5 1.12 1 1 1 1 4 1868700 1868700 0 6650 2086 6878 16394;16395;16396;16397 11663 11663 1362 1 57290 0 IINADSEDPKYIINVK TLQSEQPLQVARCTKIINADSEDPKYIINV INADSEDPKYIINVKQFAKFVVDLSDQVAP K I I V K Q 1 0 2 2 0 0 1 0 0 4 0 2 0 0 1 1 0 0 1 1 0 0 16 1 1830.9727 P35998 P35998 101 116 PSMC2 26S protease regulatory subunit 7 yes yes 2;3 0.015813 134.61 By MS/MS 6.8 0.748 2 2 1 5 36081000 36081000 0 6651 801 6879 16398;16399;16400;16401;16402 11664;11665 11665 2 524760 0 IINAFFPEGEDQVNFR FQRIPELAINPLGDRIINAFFPEGEDQVNF INAFFPEGEDQVNFRGFMRTLAHFRPIEDN R I I F R G 1 1 2 1 0 1 2 1 0 2 0 0 0 3 1 0 0 0 0 1 0 0 16 0 1894.9214 Q99653 Q99653 66 81 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.014968 82.774 By MS/MS 9 0 1 1 566620 566620 0 6652 2281 6880 16403 11666 11666 1 325190 0 IINEPTAAAIAYGLDK ATKDAGTIAGLNVMRIINEPTAAAIAYGLD INEPTAAAIAYGLDKREGEKNILVFDLGGG R I I D K R 4 0 1 1 0 0 1 1 0 3 1 1 0 0 1 0 1 0 1 0 0 0 16 0 1658.8879 P11021;P11142;P54652 P11021 198 213 HSPA5;HSPA8;HSPA2 78 kDa glucose-regulated protein;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 2;3 4.1371E-11 230.86 By MS/MS 5.4 2.06 1 1 1 3 1 1 1 1 10 41508000 41508000 0 6653 545;546 6881 16404;16405;16406;16407;16408;16409;16410;16411;16412;16413 11667;11668;11669;11670;11671;11672;11673 11667 7 1695800 0 IINEPTAAAIAYGLDKK ATKDAGTIAGLNVLRIINEPTAAAIAYGLD NEPTAAAIAYGLDKKVGAERNVLIFDLGGG R I I K K V 4 0 1 1 0 0 1 1 0 3 1 2 0 0 1 0 1 0 1 0 0 0 17 1 1786.9829 P11142;P54652 P11142 172 188 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 4.4675E-13 166.52 By MS/MS 5 2.26 1 1 1 1 2 2 2 1 11 124020000 124020000 0 6654 546 6882 16414;16415;16416;16417;16418;16419;16420;16421;16422;16423;16424 11674;11675;11676;11677 11675 4 4377400 0 IINEPTAAAIAYGLDKR ATKDAGTIAGLNVMRIINEPTAAAIAYGLD NEPTAAAIAYGLDKREGEKNILVFDLGGGT R I I K R E 4 1 1 1 0 0 1 1 0 3 1 1 0 0 1 0 1 0 1 0 0 0 17 1 1814.989 P11021 P11021 198 214 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 2.0197E-11 182.7 By MS/MS 6 0.707 1 2 1 4 18697000 18697000 0 6655 545 6883 16425;16426;16427;16428 11678;11679 11678 2 212990 0 IINEPTAAAIAYGLDR ATKDAGVIAGLNVLRIINEPTAAAIAYGLD INEPTAAAIAYGLDRTGKGERNVLIFDLGG R I I D R T 4 1 1 1 0 0 1 1 0 3 1 0 0 0 1 0 1 0 1 0 0 0 16 0 1686.8941 P0DMV9;P0DMV8;P17066 P0DMV9 172 187 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2;3 3.9599E-10 202.92 By MS/MS By MS/MS 5.25 1.92 1 1 2 4 1 1 1 1 11 1 75841000 75812000 29755 6656 528;611 6884 16429;16430;16431;16432;16433;16434;16435;16436;16437;16438;16439;16440 11680;11681;11682;11683;11684;11685 11682 6 3053900 88044 IINPMGLLVEELK LITQMTGKELFEMWKIINPMGLLVEELKKR WKIINPMGLLVEELKKRNVSAPESRLTRQS K I I L K K 0 0 1 0 0 0 2 1 0 2 3 1 1 0 1 0 0 0 0 1 0 0 13 0 1467.8371 Q9H9J2 Q9H9J2 234 246 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.013654 82.543 By MS/MS 8 0 1 1 523670 523670 0 6657 2535 6885 16441 11686 11686 1532 1 34546 0 IINTFLK TLEEDSKMTRLISCRIINTFLKTSGGMTDP MTRLISCRIINTFLKTSGGMTDPEKLIRIY R I I L K T 0 0 1 0 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 7 0 847.51674 Q86Y56 Q86Y56 724 730 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.034785 111.65 By MS/MS 4.5 0.5 1 1 2 1128300 1128300 0 6658 1844 6886 16442;16443 11687 11687 1 40944 0 IIPGADADVVVWDPEATK SNAAKLLNLYPRKGRIIPGADADVVVWDPE GADADVVVWDPEATKTISASTQVQGGDFNL R I I T K T 3 0 0 3 0 0 1 1 0 2 0 1 0 0 2 0 1 1 0 3 0 0 18 0 1894.9676 Q9BPU6 Q9BPU6 394 411 DPYSL5 Dihydropyrimidinase-related protein 5 yes yes 2 0.00024053 124.3 By MS/MS 6 0 1 1 1491300 1491300 0 6659 2300 6887 16444 11688 11688 1 11629 0 IIPGFMCQGGDFTR TGEKGFGYKGSCFHRIIPGFMCQGGDFTRH RIIPGFMCQGGDFTRHNGTGGKSIYGEKFE R I I T R H 0 1 0 1 1 1 0 3 0 2 0 0 1 2 1 0 1 0 0 0 0 0 14 0 1597.7381 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 P62937 56 69 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 2 0.013918 81.625 By MS/MS 10 0 1 1 4300700 4300700 0 6660 1163 6888 16445 11689 11689 907 1 4571200 0 IIQEFLSK PAAKKCYLEREQGEKIIQEFLSKVKQMPFT EREQGEKIIQEFLSKVKQMPFTEMSEENIT K I I S K V 0 0 0 0 0 1 1 0 0 2 1 1 0 1 0 1 0 0 0 0 0 0 8 0 976.55933 P43246 P43246 883 890 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.051613 90.709 By MS/MS 4 0 1 1 2028600 2028600 0 6661 862 6889 16446 11690 11690 1 55378 0 IIQEQDAGLDALSSIISR TRGLGFDEIRQQQQKIIQEQDAGLDALSSI EQDAGLDALSSIISRQKQMGQEIGNELDEQ K I I S R Q 2 1 0 2 0 2 1 1 0 4 2 0 0 0 0 3 0 0 0 0 0 0 18 0 1928.0215 Q9UNK0 Q9UNK0 147 164 STX8 Syntaxin-8 yes yes 2 0.026896 70.26 By MS/MS 9 0 1 1 104490 104490 0 6662 2843 6890 16447 11691 11691 1 59966 0 IIQGQGVDEPLSETGFK LTVVRHGETRFNKEKIIQGQGVDEPLSETG QGQGVDEPLSETGFKQAAAAGIFLNNVKFT K I I F K Q 0 0 0 1 0 2 2 3 0 2 1 1 0 1 1 1 1 0 0 1 0 0 17 0 1816.9207 Q9NQ88 Q9NQ88 21 37 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 2 0.00040387 123.68 By MS/MS 8.5 0.5 1 1 2 860470 860470 0 6663 2586 6891 16448;16449 11692 11692 1 140970 0 IIQINTDSLVQEK ETEQEMEEWLITLKKIIQINTDSLVQEKKE KKIIQINTDSLVQEKKETVETAQDDETSSQ K I I E K K 0 0 1 1 0 2 1 0 0 3 1 1 0 0 0 1 1 0 0 1 0 0 13 0 1499.8195 Q5JSL3 Q5JSL3 270 282 DOCK11 Dedicator of cytokinesis protein 11 yes yes 2 1.6329E-07 181.66 By MS/MS 2 0 1 1 195250 195250 0 6664 1607 6892 16450 11693 11693 1 9704.9 0 IIQLCDGIMASGR SYERYHSKQIIGIPKIIQLCDGIMASGRKA PKIIQLCDGIMASGRKAVTHAIPALQPIVH K I I G R K 1 1 0 1 1 1 0 2 0 3 1 0 1 0 0 1 0 0 0 0 0 0 13 0 1432.7167 P42858 P42858 1520 1532 HTT Huntingtin yes yes 2 4.9906E-05 156.69 By MS/MS 1.5 0.5 1 1 2 399040 399040 0 6665 858 6893 16451;16452 11694;11695;11696;11697 11694 617 4 19716 0 IIQLLDDYPK PREDRATWKSNYFLKIIQLLDDYPKCFIVG NYFLKIIQLLDDYPKCFIVGADNVGSKQMQ K I I P K C 0 0 0 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 1 0 0 0 10 0 1216.6703 Q8NHW5;P05388 Q8NHW5 17 26 RPLP0P6;RPLP0 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 0.00058322 140.17 By MS/MS 7.5 0.5 1 1 2 2915100 2915100 0 6666 473 6894 16453;16454 11698 11698 1 169410 0 IIQTPGLWESENQNK TCDGVQCAFEELVEKIIQTPGLWESENQNK IIQTPGLWESENQNKGVKLSHREEGQGGGA K I I N K G 0 0 2 0 0 2 2 1 0 2 1 1 0 0 1 1 1 1 0 0 0 0 15 0 1755.8792 Q9NP72 Q9NP72 169 183 RAB18 Ras-related protein Rab-18 yes yes 2 2.0789E-14 204.85 By MS/MS 9 0 1 1 626450 626450 0 6667 2573 6895 16455 11699 11699 1 359520 0 IIQVGNR PFRSPSWYGIPRLEKIIQVGNRIKFVIKRP YGIPRLEKIIQVGNRIKFVIKRPELLTHST K I I N R I 0 1 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 7 0 798.47119 P78347 P78347 527 533 GTF2I General transcription factor II-I yes yes 2 0.021238 122.98 By MS/MS 4 0.816 1 1 1 3 4541300 4541300 0 6668 1194 6896 16456;16457;16458 11700 11700 1 122640 0 IIREEYGR PSETTVGNMVRRVLKIIREEYGRLHGRSDE MVRRVLKIIREEYGRLHGRSDESDQQESLH K I I G R L 0 2 0 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 8 1 1034.5509 P49770 P49770 88 95 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 3 0.032939 82.671 By MS/MS 7 0 1 1 1304400 1304400 0 6669 932 6897 16459 11701 11701 1 23309 0 IISAAFEER KNFNAVGSVLSKKAKIISAAFEERHNAKTV LSKKAKIISAAFEERHNAKTVGEIKQFVSQ K I I E R H 2 1 0 0 0 0 2 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1034.5397 Q96AX1 Q96AX1 317 325 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 2 0.0027622 135.71 By MS/MS 5 0 1 1 1406900 1406900 0 6670 2124 6898 16460 11702 11702 1 57828 0 IISAASEGGANVFTVSYFK ETLINKGFVEIQTPKIISAASEGGANVFTV ASEGGANVFTVSYFKNNAYLAQSPQLYKQM K I I F K N 3 0 1 0 0 0 1 2 0 2 0 1 0 2 0 3 1 0 1 2 0 0 19 0 1959.9942 P14868 P14868 223 241 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 1.0723E-25 275.76 By MS/MS 6 0 1 1 1593900 1593900 0 6671 594 6899 16461 11703 11703 1 12429 0 IISANGCKVDNSSLTGESEPQTR LVEVKGGDRIPADLRIISANGCKVDNSSLT VDNSSLTGESEPQTRSPDFTNENPLETRNI R I I T R S 1 1 2 1 1 1 2 2 0 2 1 1 0 0 1 4 2 0 0 1 0 0 23 1 2462.1707 P05023 P05023 205 227 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 8.238E-08 125.04 By MS/MS 3 1.41 1 1 1 1 1 5 3217900 3217900 0 6672 463 6900 16462;16463;16464;16465;16466 11704;11705;11706;11707 11704 4 113890 0 IISGHIDLDNR PGNFLTQALTQRLGRIISGHIDLDNRGVIF RLGRIISGHIDLDNRGVIFTEAFVARHKAR R I I N R G 0 1 1 2 0 0 0 1 1 3 1 0 0 0 0 1 0 0 0 0 0 0 11 0 1251.6571 O94874 O94874 164 174 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.024435 85.355 By MS/MS 4.5 0.5 1 1 2 1315500 1315500 0 6673 354 6901 16467;16468 11708 11708 1 52461 0 IISNASCTTNCLAPLAK FVMGVNHEKYDNSLKIISNASCTTNCLAPL SNASCTTNCLAPLAKVIHDNFGIVEGLMTT K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 P04406 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 1.5009E-13 196.37 By MS/MS 8.5 1.12 1 1 1 1 4 38421000 38421000 0 6674 452 6902 16469;16470;16471;16472 11709;11710;11711 11709 3 1332300 0 IISSIEQK VAYKNVIGARRASWRIISSIEQKEENKGGE ARRASWRIISSIEQKEENKGGEDKLKMIRE R I I Q K E 0 0 0 0 0 1 1 0 0 3 0 1 0 0 0 2 0 0 0 0 0 0 8 0 916.52295 P62258 P62258 62 69 YWHAE 14-3-3 protein epsilon yes yes 2 0.0023248 155 By MS/MS By matching 8.75 0.829 2 1 1 3 1 7411300 7348600 62783 6675 1121 6903 16473;16474;16475;16476 11712 11712 1 608410 535610 IISSIEQKEENK VAYKNVIGARRASWRIISSIEQKEENKGGE SWRIISSIEQKEENKGGEDKLKMIREYRQM R I I N K G 0 0 1 0 0 1 3 0 0 3 0 2 0 0 0 2 0 0 0 0 0 0 12 1 1416.746 P62258 P62258 62 73 YWHAE 14-3-3 protein epsilon yes yes 2;3 0.0083767 149.94 By MS/MS 8 0 2 2 5877000 5877000 0 6676 1121 6904 16477;16478 11713;11714 11714 2 387710 0 IISSNQELIYEGR NTATIFHELVYKQTKIISSNQELIYEGRRL TKIISSNQELIYEGRRLVLEPGRLAQHFPK K I I G R R 0 1 1 0 0 1 2 1 0 3 1 0 0 0 0 2 0 0 1 0 0 0 13 0 1520.7835 Q9UHD2 Q9UHD2 345 357 TBK1 Serine/threonine-protein kinase TBK1 yes yes 2 0.00024429 146.5 By MS/MS 5 0 1 1 1642900 1642900 0 6677 2780 6905 16479 11715 11715 1 67529 0 IISTTASKTETPIVSK LPAENDKPHDVEINKIISTTASKTETPIVS ISTTASKTETPIVSKSLSSSLDDTEVKKVM K I I S K S 1 0 0 0 0 0 1 0 0 3 0 2 0 0 1 3 4 0 0 1 0 0 16 1 1674.9404 O95292 O95292 140 155 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2;3 0.01864 119.96 By MS/MS 8 0 2 2 2046600 2046600 0 6678 381 6906 16480;16481 11716;11717 11716 2 135020 0 IISYAQGFMLLR KSFLEDIRKALYASKIISYAQGFMLLRQAA ASKIISYAQGFMLLRQAATEFGWTLNYGGI K I I L R Q 1 1 0 0 0 1 0 1 0 2 2 0 1 1 0 1 0 0 1 0 0 0 12 0 1410.7693 P52209 P52209 332 343 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 1.5067E-16 215.93 By MS/MS 6 0 1 1 1411300 1411300 0 6679 981 6907 16482 11718 11718 737 1 11005 0 IITEGFEAAK LKQADLYISEGLHPRIITEGFEAAKEKALQ GLHPRIITEGFEAAKEKALQFLEEVKVSRE R I I A K E 2 0 0 0 0 0 2 1 0 2 0 1 0 1 0 0 1 0 0 0 0 0 10 0 1077.5706 P40227 P40227 118 127 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.0038962 111.06 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 117890000 117830000 55680 6680 828 6908 16483;16484;16485;16486;16487;16488 11719;11720;11721 11719 3 1750100 170770 IITEGFEAAKEK LKQADLYISEGLHPRIITEGFEAAKEKALQ HPRIITEGFEAAKEKALQFLEEVKVSREMD R I I E K A 2 0 0 0 0 0 3 1 0 2 0 2 0 1 0 0 1 0 0 0 0 0 12 1 1334.7082 P40227 P40227 118 129 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 3.0484E-23 245.08 By MS/MS By matching 5.6 2.56 2 1 2 1 2 5 2 2 2 1 19 1 517920000 517840000 80367 6681 828 6909 16489;16490;16491;16492;16493;16494;16495;16496;16497;16498;16499;16500;16501;16502;16503;16504;16505;16506;16507;16508 11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733 11730 12 6926500 246480 IITHPNFNGNTLDNDIMLIK IDVLEGNEQFINAAKIITHPNFNGNTLDND NFNGNTLDNDIMLIKLSSPATLNSRVATVS K I I I K L 0 0 4 2 0 0 0 1 1 4 2 1 1 1 1 0 2 0 0 0 0 0 20 0 2282.1729 CON__P00761 CON__P00761 78 97 yes yes 2;3 1.5344E-05 149.6 By MS/MS By MS/MS 5.51 2.86 4 3 5 4 3 5 3 3 6 3 22 17 759820000 670150000 89667000 + 6682 33 6910;6911 16509;16510;16511;16512;16513;16514;16515;16516;16517;16518;16519;16520;16521;16522;16523;16524;16525;16526;16527;16528;16529;16530;16531;16532;16533;16534;16535;16536;16537;16538;16539;16540;16541;16542;16543;16544;16545;16546;16547 11734;11735;11736;11737;11738;11739;11740;11741;11742;11743;11744;11745;11746;11747;11748;11749;11750;11751;11752;11753;11754;11755;11756;11757;11758;11759;11760;11761;11762;11763;11764;11765;11766;11767;11768;11769;11770;11771;11772;11773;11774;11775;11776 11765 13 41 19823000 854400000 IITIPAALQQVK DWDYYIERLGSAIQKIITIPAALQQVKNPV IQKIITIPAALQQVKNPVPRVKHPDWLHKK K I I V K N 2 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 1 0 0 1 0 0 12 0 1293.802 Q07864 Q07864 1144 1155 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 0.011354 95.502 By MS/MS 1.5 0.5 1 1 2 165040 165040 0 6683 1283 6912 16548;16549 11777 11777 1 8151.6 0 IITLAGPTNAIFK SGARINISEGNCPERIITLAGPTNAIFKAF ERIITLAGPTNAIFKAFAMIIDKLEEDISS R I I F K A 2 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 2 0 0 0 0 0 13 0 1357.7969 Q15366 Q15366 58 70 PCBP2 Poly(rC)-binding protein 2 yes yes 2 5.8857E-08 190.57 By MS/MS 7 0.632 1 3 1 5 7143200 7143200 0 6684 1491 6913 16550;16551;16552;16553;16554 11778;11779;11780;11781 11781 4 178280 0 IITLEEGDIILTGTPK SMIFSIPYIISYVSKIITLEEGDIILTGTP ITLEEGDIILTGTPKGVGPVKENDEIEAGI K I I P K G 0 0 0 1 0 0 2 2 0 4 2 1 0 0 1 0 3 0 0 0 0 0 16 0 1711.9608 Q6P587 Q6P587 179 194 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 2;3 8.9817E-29 290.66 By MS/MS 8.67 0.471 1 2 3 1890100 1890100 0 6685 1710 6914 16555;16556;16557 11782;11783 11782 2 1029700 0 IITLTGPTNAIFK SGARINISEGNCPERIITLTGPTNAIFKAF ERIITLTGPTNAIFKAFAMIIDKLEEDINS R I I F K A 1 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 3 0 0 0 0 0 13 0 1387.8075 Q15365 Q15365 58 70 PCBP1 Poly(rC)-binding protein 1 yes yes 2 1.8669E-05 169.99 By MS/MS 7.5 0.5 1 1 2 1837400 1837400 0 6686 1490 6915 16558;16559 11784;11785 11784 2 67902 0 IITQVFEMDISK LKNTLPDMNTSEMEKIITQVFEMDISKQLH MEKIITQVFEMDISKQLHAYEVEYHVLQDE K I I S K Q 0 0 0 1 0 1 1 0 0 3 0 1 1 1 0 1 1 0 0 1 0 0 12 0 1422.7429 O60343 O60343 1159 1170 TBC1D4 TBC1 domain family member 4 yes yes 2 8.8373E-17 223.08 By MS/MS 3 0.816 1 1 1 3 1324800 1324800 0 6687 246 6916 16560;16561;16562 11786 11786 143 1 35522 0 IITVEKHPDADSLYVEKIDVGEAEPR PEEVIPSRLDIRVGKIITVEKHPDADSLYV SLYVEKIDVGEAEPRTVVSGLVQFVPKEEL K I I P R T 2 1 0 3 0 0 4 1 1 3 1 2 0 0 2 1 1 0 1 3 0 0 26 2 2922.4975 P54577 P54577 375 400 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 4 0.0038854 58.332 By MS/MS 6 0 1 1 5558500 5558500 0 6688 1014 6917 16563 11787 11787 1 43345 0 IITVSMEDVK AQEGIYTLYPFINSRIITVSMEDVKILLTQ FINSRIITVSMEDVKILLTQENPFFRKLSS R I I V K I 0 0 0 1 0 0 1 0 0 2 0 1 1 0 0 1 1 0 0 2 0 0 10 0 1133.6002 Q08J23 Q08J23 619 628 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.00065237 138.98 By MS/MS 4 0 1 1 810850 810850 0 6689 1295 6918 16564 11788 11788 1 22135 0 IITWTTEPK TDFVNSSETRLAVSRIITWTTEPKSSDVRK RLAVSRIITWTTEPKSSDVRKAAQIVLISL R I I P K S 0 0 0 0 0 0 1 0 0 2 0 1 0 0 1 0 3 1 0 0 0 0 9 0 1087.5914 Q7Z460 Q7Z460 1027 1035 CLASP1 CLIP-associating protein 1 yes yes 2 0.0077519 109.71 By MS/MS 3.5 0.5 1 1 2 604340 604340 0 6690 1790 6919 16565;16566 11789 11789 1 15908 0 IIVACIETLR VQEELLKGLDNKNPKIIVACIETLRKALSE NKNPKIIVACIETLRKALSEFGSKIILLKP K I I L R K 1 1 0 0 1 0 1 0 0 3 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1186.6744 Q14008 Q14008 140 149 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.039631 114.89 By MS/MS 2.5 0.5 1 1 2 404170 404170 0 6691 1405 6920 16567;16568 11790 11790 0 16853 0 IIVAIDGWPR IRIETRQASTLEGRRIIVAIDGWPRNSRYP LEGRRIIVAIDGWPRNSRYPNGHFVRNLGD R I I P R N 1 1 0 1 0 0 0 1 0 3 0 0 0 0 1 0 0 1 0 1 0 0 10 0 1138.6499 Q9Y2L1 Q9Y2L1 398 407 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.00052754 147.51 By MS/MS 3.5 0.5 1 1 2 644680 644680 0 6692 2892 6921 16569;16570 11791 11791 1 17542 0 IIVDELKQEVISTSSK AATGPSIKIWDLEGKIIVDELKQEVISTSS IVDELKQEVISTSSKAEPPQCTSLAWSADG K I I S K A 0 0 0 1 0 1 2 0 0 3 1 2 0 0 0 3 1 0 0 2 0 0 16 1 1787.988 P63244 P63244 265 280 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2;3 8.6347E-20 214.48 By MS/MS By matching 8.5 0.764 4 1 1 4 2 36638000 36495000 142520 6693 1178 6922 16571;16572;16573;16574;16575;16576 11792;11793 11792 2 2671500 1215900 IIVEGGGAVAALQAMK AALCFLALRKPDNSRIIVEGGGAVAALQAM IVEGGGAVAALQAMKAHPQKAGVQKQACML R I I M K A 4 0 0 0 0 1 1 3 0 2 1 1 1 0 0 0 0 0 0 2 0 0 16 0 1526.849 Q6NXE6 Q6NXE6 407 422 ARMC6 Armadillo repeat-containing protein 6 yes yes 2 2.9706E-08 173.76 By MS/MS 6.5 0.5 1 1 2 2622000 2622000 0 6694 1694 6923 16577;16578 11794 11794 1215 1 38515 0 IIYIAPMR KHINMDGTINVDDFKIIYIAPMRSLVQEMV INVDDFKIIYIAPMRSLVQEMVGSFGKRLA K I I M R S 1 1 0 0 0 0 0 0 0 3 0 0 1 0 1 0 0 0 1 0 0 0 8 0 975.55756 O75643 O75643 538 545 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.017697 100.82 By MS/MS 2.5 0.5 1 1 2 513730 513730 0 6695 322 6924 16579;16580 11795 11795 178 1 21898 0 IIYIVHDEVK MKEMTCRDIVKEVAKIIYIVHDEVKDKAFE KEVAKIIYIVHDEVKDKAFELELSWVGELT K I I V K D 0 0 0 1 0 0 1 0 1 3 0 1 0 0 0 0 0 0 1 2 0 0 10 0 1227.6863 P25788 P25788 197 206 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.0053149 106.42 By MS/MS 8 0 1 1 835170 835170 0 6696 690 6925 16581 11796 11796 1 55096 0 IIYIVHDEVKDK MKEMTCRDIVKEVAKIIYIVHDEVKDKAFE VAKIIYIVHDEVKDKAFELELSWVGELTNG K I I D K A 0 0 0 2 0 0 1 0 1 3 0 2 0 0 0 0 0 0 1 2 0 0 12 1 1470.8082 P25788 P25788 197 208 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.00055459 160.53 By MS/MS 8 0 1 1 1082000 1082000 0 6697 690 6926 16582 11797 11797 1 71380 0 IKAALEAVGGTVVLE PQEIKANVAKAEAEKIKAALEAVGGTVVLE IKAALEAVGGTVVLE_______________ K I K L E - 3 0 0 0 0 0 2 2 0 1 2 1 0 0 0 0 1 0 0 3 0 0 15 1 1468.8501 P52815 P52815 184 198 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 4.8164E-09 185.3 By MS/MS 9 0 1 1 473190 473190 0 6698 993 6927 16583 11798 11798 1 271570 0 IKAIQLEYSEAR ANNNEWARYLYYTGRIKAIQLEYSEARRTM TGRIKAIQLEYSEARRTMTNALRKAPQHTA R I K A R R 2 1 0 0 0 1 2 0 0 2 1 1 0 0 0 1 0 0 1 0 0 0 12 1 1419.7722 O43242 O43242 295 306 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.028165 66.989 By MS/MS 6 0 1 1 1033000 1033000 0 6699 187 6928 16584 11799 11799 1 8055.4 0 IKAQDEAFALQDVPLSSVVR VAGLVTLKHVYEIARIKAQDEAFALQDVPL EAFALQDVPLSSVVRSIIGSARSLGIRVVK R I K V R S 3 1 0 2 0 2 1 0 0 1 2 1 0 1 1 2 0 0 0 3 0 0 20 1 2185.1743 Q9Y3B7 Q9Y3B7 123 142 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 3 0.0067282 68.88 By MS/MS 9 0 1 1 532670 532670 0 6700 2927 6929 16585 11800 11800 1 305700 0 IKDLSTVEALQNLK EKCPNLTYLNLSGNKIKDLSTVEALQNLKN KIKDLSTVEALQNLKNLKSLDLFNCEITNL K I K L K N 1 0 1 1 0 1 1 0 0 1 3 2 0 0 0 1 1 0 0 1 0 0 14 1 1570.893 Q9BTT0 Q9BTT0 100 113 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 2;3 7.683E-25 241.35 By MS/MS 8 0 2 2 6334000 6334000 0 6701 2352 6930 16586;16587 11801;11802 11802 2 417850 0 IKDMDLWEQQEEER LEEIPLIKSAYEEQRIKDMDLWEQQEEERI RIKDMDLWEQQEEERITTMQLEREKALEHK R I K E R I 0 1 0 2 0 2 4 0 0 1 1 1 1 0 0 0 0 1 0 0 0 0 14 1 1847.836 Q14152 Q14152 719 732 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 2.1491E-11 206.46 By MS/MS 3 0 2 2 772540 772540 0 6702 1409 6931 16588;16589 11803;11804 11803 2 20167 0 IKEETEIIEGEVVEIQIDRPATGTGSK TEALTQAFRRSIGVRIKEETEIIEGEVVEI VEIQIDRPATGTGSKVGKLTLKTTEMETIY R I K S K V 1 1 0 1 0 1 6 3 0 5 0 2 0 0 1 1 3 0 0 2 0 0 27 2 2940.5292 Q9Y230 Q9Y230 131 157 RUVBL2 RuvB-like 2 yes yes 3 0.049178 48.025 By MS/MS 6 0 1 1 3781300 3781300 0 6703 2864 6932 16590 11805 11805 1 29487 0 IKEGVEEAAK KESLHEVSKSDLGRKIKEGVEEAAKTAKQS DLGRKIKEGVEEAAKTAKQSAESVSKGGEK K I K A K T 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1072.5764 O43615 O43615 145 154 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 8.5324E-05 175.65 By MS/MS By matching 8 1.07 3 2 1 1 6 1 16609000 16590000 19726 6704 209 6933 16591;16592;16593;16594;16595;16596;16597 11806;11807 11806 2 350160 80981 IKEIAVTVK IIRAFRTATQLAVNKIKEIAVTVKKADKVE QLAVNKIKEIAVTVKKADKVEQRKLLEKCA K I K V K K 1 0 0 0 0 0 1 0 0 2 0 2 0 0 0 0 1 0 0 2 0 0 9 1 999.63283 Q99832 Q99832 136 144 CCT7 T-complex protein 1 subunit eta yes yes 2 0.015778 128.35 By MS/MS 7 1.41 1 1 1 1 1 5 47285000 47285000 0 6705 2295 6934 16598;16599;16600;16601;16602 11808 11808 1 464250 0 IKELDHNISK EVAKHKEQNNDSQLKIKELDHNISKHKREA DSQLKIKELDHNISKHKREAEDGAAKVSKM K I K S K H 0 0 1 1 0 0 1 0 1 2 1 2 0 0 0 1 0 0 0 0 0 0 10 1 1195.6561 O95347 O95347 910 919 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.0021249 111.27 By MS/MS 3 0 1 1 668860 668860 0 6706 385 6935 16603 11809 11809 1 17461 0 IKEWYEK KVRALEESNYELEGKIKEWYEKHGNSHQGE SNYELEGKIKEWYEKHGNSHQGEPRDYSKY K I K E K H 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 7 1 994.51238 CON__P13645;P13645;CON__P02535-1 CON__P13645 178 184 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.0091568 166.68 By MS/MS By MS/MS 5.17 2.71 3 1 3 3 3 3 1 2 3 1 8 15 15756000 9589200 6166800 + 6707 49 6936 16604;16605;16606;16607;16608;16609;16610;16611;16612;16613;16614;16615;16616;16617;16618;16619;16620;16621;16622;16623;16624;16625;16626 11810;11811;11812;11813;11814;11815;11816;11817;11818;11819;11820;11821 11821 12 2025700 14965000 IKFEMEQNLR LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA LDDFRIKFEMEQNLRQGVDADINGLRQVLD R I K L R Q 0 1 1 0 0 1 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 10 1 1306.6704 P35527;CON__P35527 P35527 241 250 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 0.00028705 153.24 By MS/MS By MS/MS 5.72 2.91 3 1 3 2 3 2 2 4 2 3 9 16 23775000 9181000 14594000 + 6708 791 6937 16627;16628;16629;16630;16631;16632;16633;16634;16635;16636;16637;16638;16639;16640;16641;16642;16643;16644;16645;16646;16647;16648;16649;16650;16651 11822;11823;11824;11825;11826;11827;11828;11829;11830;11831;11832;11833;11834;11835;11836 11834 533 15 5205400 37174000 IKFKESFAEMNR SWSSLSMDEKVELYRIKFKESFAEMNRGSN LYRIKFKESFAEMNRGSNEWKTVVGGAMFF R I K N R G 1 1 1 0 0 0 2 0 0 1 0 2 1 2 0 1 0 0 0 0 0 0 12 2 1498.7602 P13073 P13073 84 95 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 3 0.047581 74.537 By MS/MS 10 0 1 1 1062400 1062400 0 6709 571 6938 16652 11837 11837 359 1 1129200 0 IKGEELSEANVR EDRETVIKELKKSLKIKGEELSEANVRLSL SLKIKGEELSEANVRLSLLEKKLDSAAKDA K I K V R L 1 1 1 0 0 0 3 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 12 1 1343.7045 Q14203 Q14203 961 972 DCTN1 Dynactin subunit 1 yes yes 3 0.0024312 91.858 By MS/MS 3 0 1 1 2561800 2561800 0 6710 1420 6939 16653 11838 11838 1 66875 0 IKGEHPGLSIGDVAK PPSAFFLFCSEYRPKIKGEHPGLSIGDVAK IKGEHPGLSIGDVAKKLGEMWNNTAADDKQ K I K A K K 1 0 0 1 0 0 1 3 1 2 1 2 0 0 1 1 0 0 0 1 0 0 15 1 1519.8358 P09429;B2RPK0 P09429 113 127 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 2 0.0052527 132.06 By MS/MS 8 0 1 1 1305500 1305500 0 6711 515 6940 16654 11839 11839 1 86123 0 IKGSEADRQR RHGNQYIQVNEPWKRIKGSEADRQRAGTVT EPWKRIKGSEADRQRAGTVTGLAVNIAALL R I K Q R A 1 2 0 1 0 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 10 2 1158.6105 P56192 P56192 728 737 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0057446 137.13 By MS/MS By matching 4 0 2 1 1 708480 701310 7163.2 6712 1042 6941 16655;16656 11840 11840 1 19145 14968 IKHLPYTTR LYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ PRHLFRIKHLPYTTRRDSVLQMWRGMLNPG R I K T R R 0 1 0 0 0 0 0 0 1 1 1 1 0 0 1 0 2 0 1 0 0 0 9 1 1127.6451 Q53S58 Q53S58 286 294 TMEM177 Transmembrane protein 177 yes yes 3 0.013987 89.029 By MS/MS 8 0 1 1 1128400 1128400 0 6713 1591 6942 16657 11841 11841 1 74438 0 IKIIAPPER RMQKEITALAPSTMKIKIIAPPERKYSVWI APSTMKIKIIAPPERKYSVWIGGSILASLS K I K E R K 1 1 0 0 0 0 1 0 0 3 0 1 0 0 2 0 0 0 0 0 0 0 9 1 1035.6441 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P60709 327 335 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 3 0.04333 72.243 By MS/MS 7 0 1 1 3726900 3726900 0 6714 1072;1179;1593 6943 16658 11842 11842 1 66600 0 IKLEGIITR IRQLQQENRQLLNERIKLEGIITRVETYLN QLLNERIKLEGIITRVETYLNENLRKRLDQ R I K T R V 0 1 0 0 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 0 0 0 9 1 1041.6546 Q9UQE7 Q9UQE7 819 827 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.002461 114.86 By MS/MS 3 0 1 1 308570 308570 0 6715 2860 6944 16659 11843 11843 1 8055.2 0 IKLHQEDNDYINASLIK NRNRYRDVSPFDHSRIKLHQEDNDYINASL LHQEDNDYINASLIKMEEAQRSYILTQGPL R I K I K M 1 0 2 2 0 1 1 0 1 3 2 2 0 0 0 1 0 0 1 0 0 0 17 1 2013.0531 P18031 P18031 57 73 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 3 3.3597E-05 136.39 By MS/MS 6 0 1 1 12911000 12911000 0 6716 620 6945 16660 11844 11844 1 100680 0 IKNEVDSTLTFR DLNKCGPMVLDALIKIKNEVDSTLTFRRSC LIKIKNEVDSTLTFRRSCREGICGSCAMNI K I K F R R 0 1 1 1 0 0 1 0 0 1 1 1 0 1 0 1 2 0 0 1 0 0 12 1 1421.7514 P21912 P21912 79 90 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2;3 0.0029079 170.4 By MS/MS 8.33 0.471 2 1 3 4634900 4634900 0 6717 651 6946 16661;16662;16663 11845;11846 11845 2 357240 0 IKNVVHELR TDAPQVSHKPGGEPKIKNVVHELRITNQVI PGGEPKIKNVVHELRITNQVIYLNPPIEEC K I K L R I 0 1 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 9 1 1106.656 Q14204 Q14204 955 963 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.034626 76.228 By MS/MS 1 0 1 1 906320 906320 0 6718 1421 6947 16664 11847 11847 1 44281 0 IKPVLMMNK CVQTETVLRQAIAERIKPVLMMNKMDRALL QAIAERIKPVLMMNKMDRALLELQLEPEEL R I K N K M 0 0 1 0 0 0 0 0 0 1 1 2 2 0 1 0 0 0 0 1 0 0 9 1 1072.6137 P13639 P13639 151 159 EEF2 Elongation factor 2 yes yes 3 0.016776 78.334 By MS/MS By matching 4.33 0.471 2 1 2 1 3026300 3009500 16795 6719 576 6948 16665;16666;16667 11848 11848 367;368 1 83195 35094 IKQIQLEQDSGK CAGKKQSQVIPKTVRIKQIQLEQDSGKSLH TVRIKQIQLEQDSGKSLHDNLRSQTLIDLN R I K G K S 0 0 0 1 0 3 1 1 0 2 1 2 0 0 0 1 0 0 0 0 0 0 12 1 1385.7514 O75879 O75879 185 196 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2;3 2.9142E-06 202.65 By MS/MS 6 0 2 2 8890400 8890400 0 6720 333 6949 16668;16669 11849;11850 11849 2 69327 0 IKQQIALDR ERNREKAEDRAARERIKQQIALDRAERAAR RAARERIKQQIALDRAERAARFAKTKEEVE R I K D R A 1 1 0 1 0 2 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1083.64 Q92575 Q92575 268 276 UBXN4 UBX domain-containing protein 4 yes yes 3 0.048641 70.1 By MS/MS 5.5 0.5 1 1 2 1150700 1150700 0 6721 2062 6950 16670;16671 11851 11851 1 16391 0 IKSQELEVK KETVDQVEELRRDLRIKSQELEVKNAAAND LRRDLRIKSQELEVKNAAANDKLKKMVKDQ R I K V K N 0 0 0 0 0 1 2 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 9 1 1072.6128 Q14204 Q14204 3224 3232 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0096887 112.3 By MS/MS 1.5 0.5 1 1 2 1353600 1353600 0 6722 1421 6951 16672;16673 11852 11852 1 66438 0 IKVAEDEAEAAAAAK AAMSLAGAEKNGLVKIKVAEDEAEAAAAAK IKVAEDEAEAAAAAKFTGLSKEELLKVAGS K I K A K F 7 0 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 15 1 1485.7675 P08195 P08195 146 160 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2;3 7.3444E-05 185.2 By MS/MS 6 1.73 2 2 1 1 1 1 8 15746000 15746000 0 6723 499 6952 16674;16675;16676;16677;16678;16679;16680;16681 11853;11854;11855;11856;11857 11857 5 744620 0 ILAAALTECHR ELKLNNCGMGIGGGKILAAALTECHRKSSA GGGKILAAALTECHRKSSAQGKPLALKVFV K I L H R K 3 1 0 0 1 0 1 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1253.655 P46060 P46060 161 171 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0092788 99.013 By MS/MS 5 0 1 1 1086600 1086600 0 6724 876 6953 16682 11858 11858 1 44663 0 ILACDDLDEAAR RVDDAKALIADSGLKILACDDLDEAARMVV GLKILACDDLDEAARMVVKLSEIVTLAKQA K I L A R M 3 1 0 3 1 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 12 0 1360.6293 Q9P2R7 Q9P2R7 427 438 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 3.2006E-05 169.93 By MS/MS 6 0.816 1 1 1 3 29560000 29560000 0 6725 2741 6954 16683;16684;16685 11859 11859 1 534870 0 ILADAAAEGVPVR CVAIFVFMIRTLRLKILADAAAEGVPVRGA LKILADAAAEGVPVRGARNQLRMYLTMAVA K I L V R G 4 1 0 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 2 0 0 13 0 1280.7089 Q5BJH7 Q5BJH7 271 283 YIF1B Protein YIF1B yes yes 2 4.0781E-08 192.12 By MS/MS 4.57 2.77 1 1 1 1 1 1 1 7 7146200 7146200 0 6726 1599 6955 16686;16687;16688;16689;16690;16691;16692 11860;11861 11861 2 473460 0 ILADQQDKYMK EEISELFYDAKSSAKILADQQDKYMK____ SSAKILADQQDKYMK_______________ K I L M K - 1 0 0 2 0 2 0 0 0 1 1 2 1 0 0 0 0 0 1 0 0 0 11 1 1351.6806 Q9Y265 Q9Y265 446 456 RUVBL1 RuvB-like 1 yes yes 2 4.3454E-15 217.66 By MS/MS 6 0 2 2 4055100 4055100 0 6727 2870 6956;6957 16693;16694 11862;11863 11863 1660 2 31622 0 ILAEGGGAK HVDHGKTTLTAAITKILAEGGGAKFKKYEE TAAITKILAEGGGAKFKKYEEIDNAPEERA K I L A K F 2 0 0 0 0 0 1 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 9 0 814.45487 P49411 P49411 80 88 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.0060177 113.5 By MS/MS 8.5 1.12 1 1 1 1 4 125480000 125480000 0 6728 918 6958 16695;16696;16697;16698 11864 11864 1 6004500 0 ILAHNNFVGR KEAKDTKTADEVPLKILAHNNFVGRLIGKE EVPLKILAHNNFVGRLIGKEGRNLKKVEQD K I L G R L 1 1 2 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1139.62 Q9NZI8;O00425 Q9NZI8 281 290 IGF2BP1;IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 3 no no 2;3 0.00087824 164.72 By MS/MS 5.33 0.471 2 1 3 2428600 2428600 0 6729 2711;93 6959 16699;16700;16701 11865;11866 11866 2 79240 0 ILALDCGLK SIKTPRVFNTGGAPRILALDCGLKYNQIRC TGGAPRILALDCGLKYNQIRCLCQRGAEVT R I L L K Y 1 0 0 1 1 0 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1001.558 P27708 P27708 178 186 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.01017 104.44 By MS/MS 1.5 0.5 1 1 2 2567000 2567000 0 6730 709 6960 16702;16703 11867;11868 11867 2 126530 0 ILANGEIVQDDDPRVR ______________________________ LANGEIVQDDDPRVRTTTQPPRGSIPRQSF R I L V R T 1 2 1 3 0 1 1 1 0 2 1 0 0 0 1 0 0 0 0 2 0 0 16 1 1808.9381 Q96D05 Q96D05 4 19 C10orf35 Uncharacterized protein C10orf35 yes yes 3 0.052751 55.885 By MS/MS 10 0 1 1 359810 359810 0 6731 2145 6961 16704 11869 11869 1 382440 0 ILAQATSDLVNAIK FSSMGDAGEMVRQARILAQATSDLVNAIKA RILAQATSDLVNAIKADAEGESDLENSRKL R I L I K A 3 0 1 1 0 1 0 0 0 2 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1455.8297 Q9Y490 Q9Y490 828 841 TLN1 Talin-1 yes yes 2 3.1335E-06 174.23 By MS/MS 2 0 1 1 91657 91657 0 6732 2947 6962 16705 11870 11870 1 4555.8 0 ILAQDVAQLK EEAKRHLNDLLEDRKILAQDVAQLKEKKES LEDRKILAQDVAQLKEKKESGENPPPKLRR K I L L K E 2 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1097.6445 O95239 O95239 773 782 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.0008928 125.97 By MS/MS 3 0 1 1 655670 655670 0 6733 378 6963 16706 11871 11871 1 17116 0 ILAQVVGDVDTSLPR SQRSFVEFILEPLYKILAQVVGDVDTSLPR ILAQVVGDVDTSLPRTLDELGIHLTKEELK K I L P R T 1 1 0 2 0 1 0 1 0 1 2 0 0 0 1 1 1 0 0 3 0 0 15 0 1581.8726 Q15029 Q15029 380 394 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 5.0845E-07 160.18 By MS/MS 4 0 1 1 430090 430090 0 6734 1466 6964 16707 11872;11873 11872 2 11741 0 ILASESIR TIPQALNIITAHSEKILASESIRAAVNRRI ITAHSEKILASESIRAAVNRRIRGYPEKIQ K I L I R A 1 1 0 0 0 0 1 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 8 0 887.50763 O95905 O95905 181 188 ECD Protein SGT1 yes yes 2 0.017593 113.41 By MS/MS 5 0 1 1 0 0 0 6735 415 6965 16708 11874 11874 1 0 0 ILATGANVILTTGGIDDMCLK IRQRESDITKERIQKILATGANVILTTGGI NVILTTGGIDDMCLKYFVEAGAMAVRRVLK K I L L K Y 2 0 1 2 1 0 0 3 0 3 3 1 1 0 0 0 3 0 0 1 0 0 21 0 2175.1279 P17987 P17987 278 298 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 2.5089E-25 270.51 By MS/MS 6 0 3 3 26928000 26928000 0 6736 619 6966;6967 16709;16710;16711 11875;11876;11877 11877 407 3 209980 0 ILATPPQEDAPSVDIANIR QIIQEIYSQIQSKKKILATPPQEDAPSVDI PPQEDAPSVDIANIRMPSLPSYKVGDKIAT K I L I R M 3 1 1 2 0 1 1 0 0 3 1 0 0 0 3 1 1 0 0 1 0 0 19 0 2019.0637 P29401 P29401 284 302 TKT Transketolase yes yes 2 2.8596E-07 142.19 By MS/MS 6 0.816 1 1 1 3 2735900 2735900 0 6737 725 6968 16712;16713;16714 11878 11878 1 54687 0 ILAVDSSCQADLVK SARELRPLLVFIWAKILAVDSSCQADLVKD KILAVDSSCQADLVKDNGHKYFLSVLADPY K I L V K D 2 0 0 2 1 1 0 0 0 1 2 1 0 0 0 2 0 0 0 2 0 0 14 0 1517.7759 Q8N122 Q8N122 498 511 RPTOR Regulatory-associated protein of mTOR yes yes 2 1.579E-06 145.31 By MS/MS 3 0 1 1 0 0 0 6738 1891 6969 16715 11879 11879 1 0 0 ILAVNGQDVR PRGLAARSGLRVGDRILAVNGQDVRDATHQ RVGDRILAVNGQDVRDATHQEAVSALLRPC R I L V R D 1 1 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1083.6037 Q14160 Q14160 1058 1067 SCRIB Protein scribble homolog yes yes 2 0.0026201 126.24 By MS/MS 2 0 1 1 602410 602410 0 6739 1412 6970 16716 11880 11880 1 29943 0 ILCFYGPPGVGK EFIAVSQLRGSTQGKILCFYGPPGVGKTSI QGKILCFYGPPGVGKTSIARSIARALNREY K I L G K T 0 0 0 0 1 0 0 3 0 1 1 1 0 1 2 0 0 0 1 1 0 0 12 0 1306.6744 P36776 P36776 518 529 LONP1 Lon protease homolog, mitochondrial yes yes 2 5.6745E-05 164.53 By MS/MS 5 0.816 1 1 1 3 2136600 2136600 0 6740 809 6971 16717;16718;16719 11881 11881 1 49712 0 ILDAVVAQEPLHR EGPLCDELIRNVKFKILDAVVAQEPLHRGG FKILDAVVAQEPLHRGGGQIIPTARRVVYS K I L H R G 2 1 0 1 0 1 1 0 1 1 2 0 0 0 1 0 0 0 0 2 0 0 13 0 1459.8147 Q15029 Q15029 791 803 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2;3 0.0016244 123.67 By MS/MS 4.83 1.34 1 2 1 1 1 6 12079000 12079000 0 6741 1466 6972 16720;16721;16722;16723;16724;16725 11882;11883 11883 2 305910 0 ILDDICVAK KLPETNLFETEETRKILDDICVAKAVECPP TEETRKILDDICVAKAVECPPPRTTARLLD K I L A K A 1 0 0 2 1 0 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1045.5478 Q15046 Q15046 422 430 KARS Lysine--tRNA ligase yes yes 2 0.0053784 114.89 By MS/MS 5 0 1 1 4135500 4135500 0 6742 1471 6973 16726 11884 11884 1 169990 0 ILDEIEEHNIK ADTLTLKERERLKKRILDEIEEHNIKIYHL LKKRILDEIEEHNIKIYHLPDAESDEDEDF R I L I K I 0 0 1 1 0 0 3 0 1 3 1 1 0 0 0 0 0 0 0 0 0 0 11 0 1351.6983 Q15019 Q15019 199 209 SEPT2 Septin-2 yes yes 2 6.5025E-05 172.98 By MS/MS 7 0 1 1 2914700 2914700 0 6743 1462 6974 16727 11885 11885 1 52087 0 ILDIDNVDLAMGK PIQQAKALGLQFHSRILDIDNVDLAMGKMM SRILDIDNVDLAMGKMMEQGPVLIITFQAQ R I L G K M 1 0 1 3 0 0 0 1 0 2 2 1 1 0 0 0 0 0 0 1 0 0 13 0 1415.733 O43615 O43615 369 381 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 8.8071E-06 172.13 By MS/MS By matching 7.86 1.12 4 1 1 1 6 1 53242000 53215000 27484 6744 209 6975;6976 16728;16729;16730;16731;16732;16733;16734 11886;11887;11888;11889;11890;11891 11886 124 6 2260700 112830 ILDLLKGTEASTK QLLSGSYIHYFHCLRILDLLKGTEASTKNI LRILDLLKGTEASTKNIFGRYSSQRMKDWQ R I L T K N 1 0 0 1 0 0 1 1 0 1 3 2 0 0 0 1 2 0 0 0 0 0 13 1 1387.7922 Q96JB5 Q96JB5 71 83 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.00021589 166.11 By MS/MS 5 0 1 1 1631000 1631000 0 6745 2206 6977 16735 11892 11892 1 67041 0 ILDLPELIDNSK VVGAGNNQQFATVCKILDLPELIDNSKYKT VCKILDLPELIDNSKYKTNHLRVHNRKELI K I L S K Y 0 0 1 2 0 0 1 0 0 2 3 1 0 0 1 1 0 0 0 0 0 0 12 0 1368.75 Q9HAC7 Q9HAC7 304 315 SUGCT Succinate--hydroxymethylglutarate CoA-transferase yes yes 2 0.0095843 97.472 By MS/MS 7 0 1 1 234770 234770 0 6746 2542 6978 16736 11893 11893 1 4195.4 0 ILDNLMEMK VKNLVLKQQNLPVTRILDNLMEMKSNPETD NLPVTRILDNLMEMKSNPETDDYRYFDPKM R I L M K S 0 0 1 1 0 0 1 0 0 1 2 1 2 0 0 0 0 0 0 0 0 0 9 0 1105.5512 Q8WVM8 Q8WVM8 550 558 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 0.0008397 145.72 By MS/MS 5 0 1 1 500970 500970 0 6747 2033 6979 16737 11894 11894 1 20592 0 ILDNTSEPQPGEAR GRLLKPREMEQQMQRILDNTSEPQPGEARL RILDNTSEPQPGEARLAALTAGDRVPWARC R I L A R L 1 1 1 1 0 1 2 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 14 0 1525.7372 P50416 P50416 366 379 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 2 5.9691E-18 219.74 By MS/MS 4 2 1 1 1 1 1 1 1 7 2568900 2568900 0 6748 946 6980 16738;16739;16740;16741;16742;16743;16744 11895;11896;11897 11897 3 86627 0 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK QQRGQGEKSATPSRKILDPNTGEPAPVLSS PADVSTFLAFPSPEKLLRLGPKSSVLIAQQ K I L E K L 3 0 1 2 0 0 2 1 0 1 3 1 0 2 8 4 2 0 0 2 0 0 32 0 3289.6758 P46060 P46060 414 445 RANGAP1 Ran GTPase-activating protein 1 yes yes 3 1.2344E-05 68.96 By MS/MS 6 0 1 1 992670 992670 0 6749 876 6981 16745 11898;11899 11898 2 7740.8 0 ILDSAEFIK SFKAPSYLEISSMRRILDSAEFIKFTVIRP ISSMRRILDSAEFIKFTVIRPFPGLVINNQ R I L I K F 1 0 0 1 0 0 1 0 0 2 1 1 0 1 0 1 0 0 0 0 0 0 9 0 1034.5648 P78347 P78347 929 937 GTF2I General transcription factor II-I yes yes 2 0.0019304 130.56 By MS/MS 3.5 0.5 1 1 2 6002900 6002900 0 6750 1194 6982 16746;16747 11900 11900 1 157220 0 ILDSVGIEADDDR ALGGNSSPSAKDIKKILDSVGIEADDDRLN KKILDSVGIEADDDRLNKVISELNGKNIED K I L D R L 1 1 0 4 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1416.6733 P05387 P05387 26 38 RPLP2 60S acidic ribosomal protein P2 yes yes 2 1.2746E-05 172.17 By MS/MS 10 0 1 1 313850 313850 0 6751 472 6983 16748 11901 11901 1 333590 0 ILDSVGIEADDDRLNK ALGGNSSPSAKDIKKILDSVGIEADDDRLN LDSVGIEADDDRLNKVISELNGKNIEDVIA K I L N K V 1 1 1 4 0 0 1 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 16 1 1771.8952 P05387 P05387 26 41 RPLP2 60S acidic ribosomal protein P2 yes yes 2 1.3493E-13 196.27 By MS/MS 10 0 1 1 205440 205440 0 6752 472 6984 16749 11902 11902 1 218360 0 ILDTLGLLR KKKEAMIQCSLEACRILDTLGLLRQEAVSR SLEACRILDTLGLLRQEAVSRKRKAKNWED R I L L R Q 0 1 0 1 0 0 0 1 0 1 4 0 0 0 0 0 1 0 0 0 0 0 9 0 1012.6281 Q9BWU0 Q9BWU0 437 445 SLC4A1AP Kanadaptin yes yes 2 0.00025345 160.63 By MS/MS 4 0 1 1 251570 251570 0 6753 2398 6985 16750 11903 11903 1 6867.5 0 ILDVAQDLK WYMRGEQYDQAKLSRILDVAQDLKALSMLL QAKLSRILDVAQDLKALSMLLNGTPFAFVI R I L L K A 1 0 0 2 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 9 0 1013.5757 A5YKK6 A5YKK6 560 568 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.011002 102.62 By MS/MS 2.5 0.5 1 1 2 709870 709870 0 6754 19 6986 16751;16752 11904 11904 1 29498 0 ILDVASLEVLNEVNR LKMRQGEEVFQSLSKILDVASLEVLNEVNR ILDVASLEVLNEVNRRSLKKLASQADSTEQ K I L N R R 1 1 2 1 0 0 2 0 0 1 3 0 0 0 0 1 0 0 0 3 0 0 15 0 1682.9203 Q92616 Q92616 2635 2649 GCN1L1 Translational activator GCN1 yes yes 2 5.247E-10 187.31 By MS/MS 2 0 1 1 137720 137720 0 6755 2068 6987 16753 11905 11905 1 6845.2 0 ILDVLEEIPK VCNTPHERLRILYTKILDVLEEIPKNAAYR ILYTKILDVLEEIPKNAAYRKYTEQITNEK K I L P K N 0 0 0 1 0 0 2 0 0 2 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1167.6751 Q16718 Q16718 31 40 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2 0.00098936 123.35 By MS/MS 10 0 1 1 2144800 2144800 0 6756 1544 6988 16754 11906 11906 1 2279700 0 ILDVMYSR STFDTQITKKMGYYKILDVMYSRLPKDDVH KKMGYYKILDVMYSRLPKDDVHAKESKINQ K I L S R L 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 1 1 0 0 8 0 995.511 P78527 P78527 1876 1883 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.016392 101.64 By MS/MS 1.33 0.471 2 1 3 2120300 2120300 0 6757 1197 6989;6990 16755;16756;16757 11907;11908 11907 957 2 104490 0 ILDVNDNIPVVENK EVTDKPVKQAQVQIRILDVNDNIPVVENKV RILDVNDNIPVVENKVLEGMVEENQVNVEV R I L N K V 0 0 3 2 0 0 1 0 0 2 1 1 0 0 1 0 0 0 0 3 0 0 14 0 1580.841 Q14126 Q14126 262 275 DSG2 Desmoglein-2 yes yes 2 1.8971E-18 228.93 By MS/MS 3 0 1 1 822430 822430 0 6758 1407 6991 16758 11909 11909 1 21470 0 ILDYSCSQDR VPVDIMDLALSAHIKILDYSCSQDRDTQKI SAHIKILDYSCSQDRDTQKIQWIDRFIEEL K I L D R D 0 1 0 2 1 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 10 0 1255.5503 Q93008;O00507 Q93008 535 544 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.0006226 140.17 By MS/MS 1.5 0.5 1 1 2 939530 939530 0 6759 2096 6992 16759;16760 11910 11910 1 46637 0 ILEASQLK LSRFLVKRFCSEPQKILEASQLKETLQAVP FCSEPQKILEASQLKETLQAVPKPGAFDLE K I L L K E 1 0 0 0 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 8 0 900.52803 O00411 O00411 1198 1205 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0081596 125.31 By MS/MS 3 0 1 1 3296600 3296600 0 6760 92 6993 16761 11911 11911 1 86057 0 ILEDNSIPQVK AVRVTGADVPMPYAKILEDNSIPQVKDIIF PYAKILEDNSIPQVKDIIFAIKKTLNI___ K I L V K D 0 0 1 1 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1254.682 P11177 P11177 337 347 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 5.0409E-06 205.18 By MS/MS By matching 5.75 2.77 1 2 1 3 1 66787000 66745000 41730 6761 549 6994 16762;16763;16764;16765 11912;11913;11914 11914 3 2498600 171310 ILEDSGFDEQQEFR SQPALTSSRVCFPERILEDSGFDEQQEFRS RILEDSGFDEQQEFRSRCSSVTGVQRRVHE R I L F R S 0 1 0 2 0 2 3 1 0 1 1 0 0 2 0 1 0 0 0 0 0 0 14 0 1711.7689 O60343 O60343 300 313 TBC1D4 TBC1 domain family member 4 yes yes 2 6.3234E-18 218.94 By MS/MS 4 0.816 1 1 1 3 3484900 3484900 0 6762 246 6995 16766;16767;16768 11915 11915 1 93943 0 ILEDTQFVDGYK TSAEASPAECCQHAKILEDTQFVDGYKQLG HAKILEDTQFVDGYKQLGFQETAYGEFLSR K I L Y K Q 0 0 0 2 0 1 1 1 0 1 1 1 0 1 0 0 1 0 1 1 0 0 12 0 1426.698 Q14C86 Q14C86 76 87 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 7.3729E-11 199.19 By MS/MS 2.5 0.5 1 1 2 459000 459000 0 6763 1455 6996 16769;16770 11916;11917 11916 2 22815 0 ILEDVVGVPEK EDEHFEFHSRPCPTKILEDVVGVPEKKVLP CPTKILEDVVGVPEKKVLPITVPKSPAFAL K I L E K K 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 3 0 0 11 0 1196.6653 Q9ULW0 Q9ULW0 466 476 TPX2 Targeting protein for Xklp2 yes yes 2 0.02465 85.161 By MS/MS 3 0 1 1 3910200 3910200 0 6764 2828 6997 16771 11918 11918 1 102080 0 ILEFFGLK ILFIFIDSDHTDNQRILEFFGLKKEECPAV DHTDNQRILEFFGLKKEECPAVRLITLEEE R I L L K K 0 0 0 0 0 0 1 1 0 1 2 1 0 2 0 0 0 0 0 0 0 0 8 0 965.5586 P07237 P07237 301 308 P4HB Protein disulfide-isomerase yes yes 2 0.0077023 140.98 By MS/MS 6 0 1 1 1839800 1839800 0 6765 487 6998 16772 11919 11919 1 14347 0 ILEFFGLKKEECPAVR ILFIFIDSDHTDNQRILEFFGLKKEECPAV LEFFGLKKEECPAVRLITLEEEMTKYKPES R I L V R L 1 1 0 0 1 0 3 1 0 1 2 2 0 2 1 0 0 0 0 1 0 0 16 2 1935.0288 P07237 P07237 301 316 P4HB Protein disulfide-isomerase yes yes 3 0.019531 75.764 By MS/MS 6 0 1 1 1497000 1497000 0 6766 487 6999 16773 11920 11920 1 11674 0 ILEFIAVSQLR VLEEDHYGMEDVKKRILEFIAVSQLRGSTQ VKKRILEFIAVSQLRGSTQGKILCFYGPPG R I L L R G 1 1 0 0 0 1 1 0 0 2 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1287.7551 P36776 P36776 501 511 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.019225 90.05 By MS/MS 4 0 1 1 174330 174330 0 6767 809 7000 16774 11921 11921 1 4759.1 0 ILEGSGVDAK GAPIGVHPSLAPLAKILEGSGVDAKVEPEV APLAKILEGSGVDAKVEPEVKDSLGVYCID K I L A K V 1 0 0 1 0 0 1 2 0 1 1 1 0 0 0 1 0 0 0 1 0 0 10 0 987.52368 Q9Y4C2 Q9Y4C2 104 113 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 0.053059 78.264 By MS/MS By matching 1.67 0.471 1 2 2 1 369900 348440 21462 6768 2952 7001 16775;16776;16777 11922;11923 11922 2 17140 18069 ILEGTETTK LEERVPINDVLAEDKILEGTETTKYVFTDI VLAEDKILEGTETTKYVFTDISYSIPHRER K I L T K Y 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 3 0 0 0 0 0 9 0 990.52334 P82650 P82650 147 155 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.01028 104.2 By MS/MS By matching 7.33 0.471 2 1 2 1 4186900 4121600 65336 6769 1201 7002 16778;16779;16780 11924 11924 1 81418 268220 ILELDQELIK NVKYELQQLEGSSDRILELDQELIKAEREL GSSDRILELDQELIKAERELSKAEKNSNVE R I L I K A 0 0 0 1 0 1 2 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1212.6966 Q92878 Q92878 474 483 RAD50 DNA repair protein RAD50 yes yes 2 0.00014176 166.34 By MS/MS 3 0 1 1 610670 610670 0 6770 2083 7003 16781 11925 11925 1 15942 0 ILELDQELIKAER NVKYELQQLEGSSDRILELDQELIKAEREL DRILELDQELIKAERELSKAEKNSNVETLK R I L E R E 1 1 0 1 0 1 3 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 13 1 1568.8774 Q92878 Q92878 474 486 RAD50 DNA repair protein RAD50 yes yes 3 0.036509 63.091 By MS/MS 3 0 1 1 794060 794060 0 6771 2083 7004 16782 11926 11926 1 20729 0 ILELDQFK NIYVLQELDNPGAKRILELDQFKGQQGQKR DNPGAKRILELDQFKGQQGQKRFQDMMGHG R I L F K G 0 0 0 1 0 1 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 P12956 P12956 116 123 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.01615 111.74 By MS/MS 5 0 1 1 3807200 3807200 0 6772 569 7005 16783 11927 11927 1 156490 0 ILELSGSSSEDSEK EPACLAEIEEDKARRILELSGSSSEDSEKV RILELSGSSSEDSEKVIAGLYQRAFQHLSE R I L E K V 0 0 0 1 0 0 3 1 0 1 2 1 0 0 0 5 0 0 0 0 0 0 14 0 1479.694 P78527 P78527 3359 3372 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.348E-12 197.07 By MS/MS 1 0 1 1 430590 430590 0 6773 1197 7006 16784 11928 11928 1 21038 0 ILENSEDSSPECLF MNASGPIKEKMGIFKILENSEDSSPECLF_ KILENSEDSSPECLF_______________ K I L L F - 0 0 1 1 1 0 3 0 0 1 2 0 0 1 1 3 0 0 0 0 0 0 14 0 1638.7083 Q9NRZ9 Q9NRZ9 825 838 HELLS Lymphoid-specific helicase yes yes 2 1.8609E-05 161.19 By MS/MS 4.5 0.5 1 1 2 800410 800410 0 6774 2619 7007 16785;16786 11929 11929 1 22345 0 ILENVEVK HVVFGQVIKGIGVARILENVEVKGEKPAKL KGIGVARILENVEVKGEKPAKLCVIAECGE R I L V K G 0 0 1 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 942.5386 Q08752 Q08752 161 168 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.0038151 143.89 By MS/MS 7 0 1 1 2181400 2181400 0 6775 1290 7008 16787 11930 11930 1 38982 0 ILEPGLNILIPVLDR QQEAWVVERMGRFHRILEPGLNILIPVLDR ILEPGLNILIPVLDRIRYVQSLKEIVINVP R I L D R I 0 1 1 1 0 0 1 1 0 3 4 0 0 0 2 0 0 0 0 1 0 0 15 0 1674.008 Q9UJZ1 Q9UJZ1 58 72 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.045325 68.83 By MS/MS 6 0 1 1 125260 125260 0 6776 2806 7009 16788 11931 11931 1 976.75 0 ILEPPEGQDEGVWK YIQQNIRADCSNIDKILEPPEGQDEGVWKY KILEPPEGQDEGVWKYEHLRQFCLELNGLA K I L W K Y 0 0 0 1 0 1 3 2 0 1 1 1 0 0 2 0 0 1 0 1 0 0 14 0 1595.7831 Q9Y3A3 Q9Y3A3 57 70 MOB4 MOB-like protein phocein yes yes 2 0.0019998 110.64 By MS/MS 9 0 1 1 748990 748990 0 6777 2921 7010 16789 11932 11932 1 429850 0 ILEQQNSSR RQFEDEKANWEAQQRILEQQNSSRTLEKNK WEAQQRILEQQNSSRTLEKNKKKGKIF___ R I L S R T 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 9 0 1073.5465 Q16181 Q16181 417 425 SEPT7 Septin-7 yes yes 2 0.0028989 120.31 By MS/MS 6.5 0.5 1 1 2 2537200 2537200 0 6778 1530 7011 16790;16791 11933 11933 1 33018 0 ILETTTFFQR EQLDPDELETITMHKILETTTFFQRAVYLG ITMHKILETTTFFQRAVYLGELPHDQDVVE K I L Q R A 0 1 0 0 0 1 1 0 0 1 1 0 0 2 0 0 3 0 0 0 0 0 10 0 1254.6608 Q9NYU2 Q9NYU2 659 668 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 3.4876E-07 191.17 By MS/MS 4 1 1 1 2 2451200 2451200 0 6779 2699 7012 16792;16793 11934;11935 11934 2 63988 0 ILEVHIDK RCKSCNGRKIVREKKILEVHIDKGMKDGQK KIVREKKILEVHIDKGMKDGQKITFHGEGD K I L D K G 0 0 0 1 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 965.55458 P31689 P31689 207 214 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 0.00080773 164.72 By MS/MS 6.8 0.748 2 2 1 5 28575000 28575000 0 6780 755 7013 16794;16795;16796;16797;16798 11936;11937;11938 11936 3 306430 0 ILEVHVDK RCKKCEGKKVIKEVKILEVHVDKGMKHGQR KVIKEVKILEVHVDKGMKHGQRITFTGEAD K I L D K G 0 0 0 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 951.53893 O60884 O60884 216 223 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.0049933 137.9 By MS/MS 7 0.816 1 1 1 3 8285300 8285300 0 6781 273 7014 16799;16800;16801 11939 11939 1 147470 0 ILEVLPGR FLCPADVTDPRTSQRILEVLPGRRADVILS DPRTSQRILEVLPGRRADVILSDMAPNATG R I L G R R 0 1 0 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 8 0 895.5491 Q9UI43 Q9UI43 139 146 FTSJ2 rRNA methyltransferase 2, mitochondrial yes yes 2 0.023957 101.64 By MS/MS 9 0.816 1 1 1 3 1809500 1809500 0 6782 2789 7015 16802;16803;16804 11940 11940 1 714090 0 ILEVVKDK LRACRRLNDFASTVRILEVVKDKAGPHKEI DFASTVRILEVVKDKAGPHKEIYPYVIQEL R I L D K A 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 2 0 0 8 1 942.57498 P20674 P20674 108 115 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 3 0.040077 101.6 By MS/MS 10 0 1 1 502250 502250 0 6783 644 7016 16805 11941 11941 1 533840 0 ILFAPGSEEAIER ALSSRAASVSSLHERILFAPGSEEAIERLK ERILFAPGSEEAIERLKETEKIIAELNETW R I L E R L 2 1 0 0 0 0 3 1 0 2 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1430.7405 Q12756 Q12756 424 436 KIF1A Kinesin-like protein KIF1A yes yes 2 0.001284 127.87 By MS/MS 2.4 1.02 1 2 1 1 5 1852100 1852100 0 6784 1302 7017 16806;16807;16808;16809;16810 11942;11943;11944 11943 3 71995 0 ILFDGIPLEK VGMAGVAIDTVEDTKILFDGIPLEKMSVSM VEDTKILFDGIPLEKMSVSMTMNGAVIPVL K I L E K M 0 0 0 1 0 0 1 1 0 2 2 1 0 1 1 0 0 0 0 0 0 0 10 0 1143.654 P22033 P22033 172 181 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.005591 105.52 By MS/MS 4.5 0.5 1 1 2 1192200 1192200 0 6785 653 7018 16811;16812 11945 11945 1 48450 0 ILFEQQIF QFSEFYHTPPPGFEKILFEQQIF_______ PPPGFEKILFEQQIF_______________ K I L I F - 0 0 0 0 0 2 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1036.5593 Q5W111 Q5W111 189 196 SPRYD7 SPRY domain-containing protein 7 yes yes 2 0.02399 101.6 By MS/MS 9 0 1 1 248760 248760 0 6786 1663 7019 16813 11946 11946 1 142770 0 ILFFNTPK IEKAYEKILFTEATRILFFNTPKKMTDYAK LFTEATRILFFNTPKKMTDYAKKRGWVLGP R I L P K K 0 0 1 0 0 0 0 0 0 1 1 1 0 2 1 0 1 0 0 0 0 0 8 0 978.55385 P48556 P48556 290 297 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 2 0.018183 107.9 By MS/MS By matching 8 0 2 1 1 7921000 7878400 42640 6787 906 7020 16814;16815 11947 11947 1 519730 363770 ILFRPVASQLPR ITGSKDLQNVNITLRILFRPVASQLPRIFT TLRILFRPVASQLPRIFTSIGEDYDERVLP R I L P R I 1 2 0 0 0 1 0 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 12 1 1395.8351 P35232 P35232 94 105 PHB Prohibitin yes yes 3 0.0044776 97.214 By MS/MS 8 0 1 1 3595000 3595000 0 6788 782 7021 16816 11948 11948 1 237160 0 ILFTEATR IRDEIAGCIEKAYEKILFTEATRILFFNTP IEKAYEKILFTEATRILFFNTPKKMTDYAK K I L T R I 1 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 8 0 949.52328 P48556 P48556 282 289 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 2 0.0050827 135.84 By MS/MS By matching 8 0 2 1 1 13307000 13206000 101540 6789 906 7022 16817;16818 11949 11949 1 871190 866230 ILFVSQGSEIASQGR EVQLVLNQLIGITSKILFVSQGSEIASQGR ILFVSQGSEIASQGRELANHFQSEGTPVMI K I L G R E 1 1 0 0 0 2 1 2 0 2 1 0 0 1 0 3 0 0 0 1 0 0 15 0 1590.8366 Q9NUQ7 Q9NUQ7 370 384 UFSP2 Ufm1-specific protease 2 yes yes 2 0.0058442 101.45 By MS/MS 6.5 0.5 1 1 2 7156700 7156700 0 6790 2640 7023 16819;16820 11950;11951 11950 2 68468 0 ILGADTSVDLEETGR QKTGTAEMSSILEERILGADTSVDLEETGR ILGADTSVDLEETGRVLSIGDGIARVHGLR R I L G R V 1 1 0 2 0 0 2 2 0 1 2 0 0 0 0 1 2 0 0 1 0 0 15 0 1574.7788 P25705 P25705 59 73 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 2.5817E-38 260.22 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 201100000 200410000 689040 6791 687 7024 16821;16822;16823;16824;16825;16826 11952;11953;11954;11955;11956;11957 11956 6 2184900 2113200 ILGEELGFVK DLKSKDFPEARAYLRILGEELGFVKLHDLQ RAYLRILGEELGFVKLHDLQLLGKLLLKGS R I L V K L 0 0 0 0 0 0 2 2 0 1 2 1 0 1 0 0 0 0 0 1 0 0 10 0 1103.6227 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 776 785 yes yes 2 0.00088088 128.38 By MS/MS 4.86 3.18 1 1 1 1 1 1 1 7 2735400 2735400 0 + 6792 31 7025 16827;16828;16829;16830;16831;16832;16833 11958;11959;11960;11961 11958 4 544190 0 ILGLDSLEEVLDVK VEEIWKSMTLSYLQKILGLDSLEEVLDVKL KILGLDSLEEVLDVKLVNSKFIIHNVYSVS K I L V K L 0 0 0 2 0 0 2 1 0 1 4 1 0 0 0 1 0 0 0 2 0 0 14 0 1541.8552 Q8WUY9 Q8WUY9 197 210 DEPDC1B DEP domain-containing protein 1B yes yes 2 0.00014065 142.89 By MS/MS 6 0 1 1 235800 235800 0 6793 2022 7026 16834 11962 11962 1 1838.8 0 ILGLLDAYLK HNKQATENAKEEVRRILGLLDAYLKTRTFL EEVRRILGLLDAYLKTRTFLVGERVTLADI R I L L K T 1 0 0 1 0 0 0 1 0 1 4 1 0 0 0 0 0 0 1 0 0 0 10 0 1117.6747 P26641 P26641 138 147 EEF1G Elongation factor 1-gamma yes yes 2 0.00082987 130.75 By MS/MS 6.5 0.5 1 1 2 31707000 31707000 0 6794 700 7027 16835;16836 11963;11964 11963 2 248390 0 ILGPAESDEFLAR STESVAEISSNSLERILGPAESDEFLARVY ERILGPAESDEFLARVYEKLITGCYNILAN R I L A R V 2 1 0 1 0 0 2 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 13 0 1416.7249 Q5T4S7 Q5T4S7 1337 1349 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.0027474 115.7 By MS/MS 2 0.816 1 1 1 3 721650 721650 0 6795 1627 7028 16837;16838;16839 11965 11965 1 25801 0 ILGSEGEPAFR RKNYGVTFPIFHKIKILGSEGEPAFRFLVD HKIKILGSEGEPAFRFLVDSSKKEPRWNFW K I L F R F 1 1 0 0 0 0 2 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1174.5982 Q8TED1 Q8TED1 142 152 GPX8 Probable glutathione peroxidase 8 yes yes 2 4.0829E-16 222.42 By MS/MS 9 0 1 1 3473400 3473400 0 6796 2001 7029 16840 11966 11966 1 1993400 0 ILGSGISSSSVLHGMVFK PDSGHFNVDNIRVCKILGSGISSSSVLHGM SGISSSSVLHGMVFKKETEGDVTSVKDAKI K I L F K K 0 0 0 0 0 0 0 3 1 2 2 1 1 1 0 5 0 0 0 2 0 0 18 0 1817.971 P50990 P50990 207 224 CCT8 T-complex protein 1 subunit theta yes yes 2;3 6.5508E-14 190.1 By MS/MS 6.2 0.4 4 1 5 60073000 60073000 0 6797 955 7030;7031 16841;16842;16843;16844;16845 11967;11968;11969;11970 11970 707 4 474470 0 ILGVDKNASEDEIKK AQLELKKSKRKDYYKILGVDKNASEDEIKK ILGVDKNASEDEIKKAYRKRALMHHPDRHS K I L K K A 1 0 1 2 0 0 2 1 0 2 1 3 0 0 0 1 0 0 0 1 0 0 15 2 1657.8887 Q99615 Q99615 385 399 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.0041643 134.18 By MS/MS 6 0 1 1 1425000 1425000 0 6798 2276 7032 16846 11971 11971 1 11112 0 ILGVGISTGGR MCVEAAAEAVKLNCRILGVGISTGGRVNPR LNCRILGVGISTGGRVNPREGIVLHSTKLI R I L G R V 0 1 0 0 0 0 0 4 0 2 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1028.5978 Q9Y223 Q9Y223 467 477 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.0018904 121.73 By MS/MS 5 0 1 1 1489100 1489100 0 6799 2862 7033 16847 11972 11972 1 61209 0 ILGVGPDDPDLVR KSTVFGTALNYVSLRILGVGPDDPDLVRAR LRILGVGPDDPDLVRARNILHKKGGAVAIP R I L V R A 0 1 0 3 0 0 0 2 0 1 2 0 0 0 2 0 0 0 0 2 0 0 13 0 1364.73 P48449 P48449 163 175 LSS Lanosterol synthase yes yes 2 9.9904E-06 161.67 By MS/MS 5 0 1 1 1190100 1190100 0 6800 904 7034 16848 11973 11973 1 48918 0 ILHENTQTDK ITAANNLLAAAIDTRILHENTQTDKALYNR AIDTRILHENTQTDKALYNRLVPLVNGVRE R I L D K A 0 0 1 1 0 1 1 0 1 1 1 1 0 0 0 0 2 0 0 0 0 0 10 0 1197.599 Q6UB35 Q6UB35 507 516 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2;3 2.1651E-21 244.8 By MS/MS By MS/MS 4.33 1.05 2 4 1 2 7 2 12883000 12682000 200780 6801 1726 7035 16849;16850;16851;16852;16853;16854;16855;16856;16857 11974;11975;11976;11977;11978;11979 11976 6 321720 419550 ILHLLGK CEFIEDCEHTVLATKILHLLGKEGPRTPVP EHTVLATKILHLLGKEGPRTPVPSKYIRFI K I L G K E 0 0 0 0 0 0 0 1 1 1 3 1 0 0 0 0 0 0 0 0 0 0 7 0 792.52216 Q9UBF2;Q92521 Q9UBF2 455 461 COPG2;PIGB Coatomer subunit gamma-2;GPI mannosyltransferase 3 yes no 2 0.030416 114.67 By MS/MS 4.5 0.5 1 1 2 1790600 1790600 0 6802 2748 7036 16858;16859 11980 11980 1 68672 0 ILHLLGQEGPK CEFIEDCEFTVLATRILHLLGQEGPKTTNP LATRILHLLGQEGPKTTNPSKYIRFIYNRV R I L P K T 0 0 0 0 0 1 1 2 1 1 3 1 0 0 1 0 0 0 0 0 0 0 11 0 1203.6976 Q9Y678 Q9Y678 455 465 COPG1 Coatomer subunit gamma-1 yes yes 2;3 0.00028269 141.91 By MS/MS 4.5 0.957 1 2 2 1 6 14756000 14756000 0 6803 2996 7037 16860;16861;16862;16863;16864;16865 11981;11982;11983 11981 3 421440 0 ILHTYYK EKGTTEEVCRIYLLRILHTYYKFDYKAHQR VCRIYLLRILHTYYKFDYKAHQRQLTPPEG R I L Y K F 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 2 0 0 0 7 0 936.5069 Q99613;B5ME19 Q99613 507 513 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.033926 104.11 By MS/MS 4.5 1.12 2 2 2 2 8 7646700 7646700 0 6804 2275 7038 16866;16867;16868;16869;16870;16871;16872;16873 11984;11985 11984 2 203190 0 ILIANTGMDTDK KKIGVNQPKRIENAKILIANTGMDTDKIKI NAKILIANTGMDTDKIKIFGSRVRVDSTAK K I L D K I 1 0 1 2 0 0 0 1 0 2 1 1 1 0 0 0 2 0 0 0 0 0 12 0 1290.649 P78371 P78371 237 248 CCT2 T-complex protein 1 subunit beta yes yes 2 5.2304E-11 199.68 By MS/MS 6 0 2 2 10665000 10665000 0 6805 1195 7039;7040 16874;16875 11986;11987 11986 946 2 83165 0 ILIANTGMDTDKIK KKIGVNQPKRIENAKILIANTGMDTDKIKI KILIANTGMDTDKIKIFGSRVRVDSTAKVA K I L I K I 1 0 1 2 0 0 0 1 0 3 1 2 1 0 0 0 2 0 0 0 0 0 14 1 1531.828 P78371 P78371 237 250 CCT2 T-complex protein 1 subunit beta yes yes 2 7.1705E-46 285.32 By MS/MS By matching 6.86 0.833 3 2 2 6 1 76953000 76935000 18172 6806 1195 7041;7042 16876;16877;16878;16879;16880;16881;16882 11988;11989;11990 11990 946 3 665780 55733 ILIEDSDQNLK PNHSASIQLCVQKLRILIEDSDQNLKYLGL QKLRILIEDSDQNLKYLGLLAMSKILKTHP R I L L K Y 0 0 1 2 0 1 1 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1286.6718 O14617 O14617 310 320 AP3D1 AP-3 complex subunit delta-1 yes yes 2 0.0026238 117.71 By MS/MS 3 0 1 1 525140 525140 0 6807 117 7043 16883 11991 11991 1 13709 0 ILIIGESGVGK ______________________________ TTLKILIIGESGVGKSSLLLRFTDDTFDPE K I L G K S 0 0 0 0 0 0 1 3 0 3 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1084.6492 Q9NP72 Q9NP72 11 21 RAB18 Ras-related protein Rab-18 yes yes 2 0.0019237 148.69 By MS/MS 8.5 0.5 1 1 2 904340 904340 0 6808 2573 7044 16884;16885 11992 11992 1 469520 0 ILILGLDGAGK FSSIFSSLFGTREMRILILGLDGAGKTTIL REMRILILGLDGAGKTTILYRLQVGEVVTT R I L G K T 1 0 0 1 0 0 0 3 0 2 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1068.6543 P40616 P40616 20 30 ARL1 ADP-ribosylation factor-like protein 1 yes yes 2 0.00098042 152.06 By MS/MS 5 3.74 1 1 1 1 1 5 8695400 8695400 0 6809 830 7045 16886;16887;16888;16889;16890 11993;11994;11995;11996 11995 4 5915600 0 ILISSGQQK SQTVTGHHLETHDLKILISSGQQKSLAKPS ETHDLKILISSGQQKSLAKPSTSSVNVLGH K I L Q K S 0 0 0 0 0 2 0 1 0 2 1 1 0 0 0 2 0 0 0 0 0 0 9 0 972.5604 Q9UKA4 Q9UKA4 235 243 AKAP11 A-kinase anchor protein 11 yes yes 2 0.021756 95.741 By MS/MS 2 0.816 1 1 1 3 416240 416240 0 6810 2809 7046 16891;16892;16893 11997 11997 1 18838 0 ILITTVPPNLR NETGFEISSSDATVKILITTVPPNLRKLDP ATVKILITTVPPNLRKLDPELHLDIKVLQS K I L L R K 0 1 1 0 0 0 0 0 0 2 2 0 0 0 2 0 2 0 0 1 0 0 11 0 1235.7602 Q12905 Q12905 175 185 ILF2 Interleukin enhancer-binding factor 2 yes yes 2 0.020448 88.948 By MS/MS 7 0 1 1 964030 964030 0 6811 1314 7047 16894 11998 11998 1 17227 0 ILKEDILNYLEK NIKLSEVVGSGKDGRILKEDILNYLEKQTG DGRILKEDILNYLEKQTGAILPPSPKVEIM R I L E K Q 0 0 1 1 0 0 2 0 0 2 3 2 0 0 0 0 0 0 1 0 0 0 12 1 1489.8392 P11182 P11182 200 211 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 3 6.5919E-05 179.67 By MS/MS 6 0 1 1 2447100 2447100 0 6812 550 7048 16895 11999 11999 1 19082 0 ILKEEQELYQK INYCNEKLQQFFNERILKEEQELYQKEGLG FNERILKEEQELYQKEGLGVNEVHYVDNQD R I L Q K E 0 0 0 0 0 2 3 0 0 1 2 2 0 0 0 0 0 0 1 0 0 0 11 1 1419.7609 Q9UM54 Q9UM54 488 498 MYO6 Unconventional myosin-VI yes yes 2 6.2109E-07 194.12 By MS/MS 3 0 1 1 1202500 1202500 0 6813 2833 7049 16896 12000 12000 1 31391 0 ILKGEYAVR RPGANSPEMWSEAIKILKGEYAVRAIKEHK WSEAIKILKGEYAVRAIKEHKMDQAIIFCR K I L V R A 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 9 1 1047.6077 Q92499 Q92499 491 499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 3 0.026026 93.111 By MS/MS 5 0 1 1 847570 847570 0 6814 2051 7050 16897 12001 12001 1 34838 0 ILKPTDENLLK FGLAPGWVVNMADKKILKPTDENLLKYYTS ADKKILKPTDENLLKYYTS___________ K I L L K Y 0 0 1 1 0 0 1 0 0 1 3 2 0 0 1 0 1 0 0 0 0 0 11 1 1282.7497 Q9P015 Q9P015 282 292 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 3 0.012011 82.494 By MS/MS 9 0.816 1 1 1 3 7174300 7174300 0 6815 2721 7051 16898;16899;16900 12002 12002 1 618180 0 ILLAAAPTSK GLLPSLPQYMIALLKILLAAAPTSKAKTDS IALLKILLAAAPTSKAKTDSINILADVLPE K I L S K A 3 0 0 0 0 0 0 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 10 0 983.60153 Q5VSL9;Q9ULQ0 Q5VSL9 527 536 STRIP1;STRIP2 Striatin-interacting protein 1;Striatin-interacting protein 2 yes no 2 0.032089 83.948 By MS/MS 4 0 1 1 784590 784590 0 6816 1646 7052 16901 12003 12003 1 21418 0 ILLAEVPTMAVEK DMVGIDAAIANAFRRILLAEVPTMAVEKVL RRILLAEVPTMAVEKVLVYNNTSIVQDEIL R I L E K V 2 0 0 0 0 0 2 0 0 1 2 1 1 0 1 0 1 0 0 2 0 0 13 0 1412.7949 O15160 O15160 79 91 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.0014983 125.23 By MS/MS 7.2 0.748 1 2 2 5 7250700 7250700 0 6817 155 7053;7054 16902;16903;16904;16905;16906 12004;12005 12005 98 2 152760 0 ILLAGCPSYDK SAEQHLISMCEDHDRILLAGCPSYDKLLSA DHDRILLAGCPSYDKLLSAKNKDYMSIIRM R I L D K L 1 0 0 1 1 0 0 1 0 1 2 1 0 0 1 1 0 0 1 0 0 0 11 0 1235.622 Q9Y223 Q9Y223 178 188 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.013622 95.099 By MS/MS 4.5 0.5 1 1 2 1793800 1793800 0 6818 2862 7055 16907;16908 12006 12006 1 68148 0 ILLANFLAQTEALMR PVQTQHPIRKGLHHKILLANFLAQTEALMR ILLANFLAQTEALMRGKSTEEARKELQAAG K I L M R G 3 1 1 0 0 1 1 0 0 1 4 0 1 1 0 0 1 0 0 0 0 0 15 0 1702.944 P06744;CON__Q3ZBD7 P06744 424 438 GPI Glucose-6-phosphate isomerase yes no 2 1.1587E-06 132.5 By MS/MS 6 0 1 1 154260 154260 0 + 6819 484 7056 16909 12007 12007 275 0 1202.9 0 ILLDHEKEWK NIDEEMLQKAARETKILLDHEKEWKLGRCI ARETKILLDHEKEWKLGRCILRFPEILQKI K I L W K L 0 0 0 1 0 0 2 0 1 1 2 2 0 0 0 0 0 1 0 0 0 0 10 1 1309.703 P54136 P54136 564 573 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.040321 70.056 By MS/MS 5 0 1 1 1712700 1712700 0 6820 1013 7057 16910 12008 12008 1 70399 0 ILLDLEQALSSEGTQENK TPLQRLVEGYGPAGKILLDLEQALSSEGTQ DLEQALSSEGTQENKVKPLLLQLQRQPQPF K I L N K V 1 0 1 1 0 2 3 1 0 1 4 1 0 0 0 2 1 0 0 0 0 0 18 0 1987.011 Q14999 Q14999 634 651 CUL7 Cullin-7 yes yes 2 0.034735 76.759 By MS/MS 2.5 0.5 1 1 2 124880 124880 0 6821 1453 7058 16911;16912 12009 12009 1 4986.8 0 ILLELLNQMDGFDQNVNVK KRFDAQTGADREVQRILLELLNQMDGFDQN LLNQMDGFDQNVNVKVIMATNRADTLDPAL R I L V K V 0 0 3 2 0 2 1 1 0 1 4 1 1 1 0 0 0 0 0 2 0 0 19 0 2202.1355 P43686 P43686 288 306 PSMC4 26S protease regulatory subunit 6B yes yes 2;3 3.7544E-56 278.16 By MS/MS 6 0 2 2 3814600 3814600 0 6822 867 7059 16913;16914 12010;12011 12010 620 2 29747 0 ILLITEDLK DFPEDADIDLKDVDKILLITEDLKNIGNTF LKDVDKILLITEDLKNIGNTFFKSQNWEMA K I L L K N 0 0 0 1 0 0 1 0 0 2 3 1 0 0 0 0 1 0 0 0 0 0 9 0 1056.6431 Q08752 Q08752 219 227 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.002708 122.19 By MS/MS 7 0 1 1 1671500 1671500 0 6823 1290 7060 16915 12012 12012 1 29870 0 ILLNPVQVFDVTK RSGTNMGEGLLGEFRILLNPVQVFDVTKTP FRILLNPVQVFDVTKTPPIKALQLCTLLPY R I L T K T 0 0 1 1 0 1 0 0 0 1 2 1 0 1 1 0 1 0 0 3 0 0 13 0 1484.8603 P52429 P52429 242 254 DGKE Diacylglycerol kinase epsilon yes yes 2 1.3205E-17 243.91 By MS/MS 6 0 1 1 1588000 1588000 0 6824 985 7061 16916 12013 12013 1 12384 0 ILLSSGR GDLVKSTLGPKGMDKILLSSGRDASLMVTN LGPKGMDKILLSSGRDASLMVTNDGATILK K I L G R D 0 1 0 0 0 0 0 1 0 1 2 0 0 0 0 2 0 0 0 0 0 0 7 0 744.44939 P78371 P78371 51 57 CCT2 T-complex protein 1 subunit beta yes yes 2 0.040889 107.43 By MS/MS 6 0 1 1 86017000 86017000 0 6825 1195 7062 16917 12014 12014 1 670760 0 ILLSVVSMLAEPNDESGANVDASK ESSAERWSPVQSVEKILLSVVSMLAEPNDE AEPNDESGANVDASKMWRDDREQFYKIAKQ K I L S K M 3 0 2 2 0 0 2 1 0 1 3 1 1 0 1 4 0 0 0 3 0 0 24 0 2458.2261 P60604 P60604 119 142 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 yes yes 2 0.015739 57.136 By MS/MS 10 0 1 1 89465 89465 0 6826 1070 7063 16918 12015 12015 832 1 95092 0 ILLTQENPFFR FINSRIITVSMEDVKILLTQENPFFRKLSS EDVKILLTQENPFFRKLSSETYSQAKDLAK K I L F R K 0 1 1 0 0 1 1 0 0 1 2 0 0 2 1 0 1 0 0 0 0 0 11 0 1376.7452 Q08J23 Q08J23 629 639 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 1.5887E-10 196.79 By MS/MS 5.67 1.7 1 1 1 3 1197100 1197100 0 6827 1295 7064 16919;16920;16921 12016;12017 12016 2 37605 0 ILLWDTR PHKDSVFLSCSEDNRILLWDTRCPKPASQI LSCSEDNRILLWDTRCPKPASQIGCSAPGY R I L T R C 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 1 1 0 0 0 0 7 0 915.5178 Q9BQA1 Q9BQA1 192 198 WDR77 Methylosome protein 50 yes yes 2 0.042356 106.42 By matching By MS/MS 8 0 2 1 1 1899100 1760400 138710 6828 2309 7065 16922;16923 12018 12018 1 116130 1183300 ILMAINGK TPAELRRFDGVQDPRILMAINGKVFDVTKG DGVQDPRILMAINGKVFDVTKGRKFYGPEG R I L G K V 1 0 1 0 0 0 0 1 0 2 1 1 1 0 0 0 0 0 0 0 0 0 8 0 858.49971 O00264 O00264 89 96 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 0.011646 110.61 By MS/MS 9 0 1 1 1170600 1170600 0 6829 85 7066 16924 12019 12019 49 1 671810 0 ILMLGLDAAGK MGKVLSKIFGNKEMRILMLGLDAAGKTTIL KEMRILMLGLDAAGKTTILYKLKLGQSVTT R I L G K T 2 0 0 1 0 0 0 2 0 1 3 1 1 0 0 0 0 0 0 0 0 0 11 0 1100.6264 P62330 P62330 16 26 ARF6 ADP-ribosylation factor 6 yes yes 2 0.00026716 147.2 By MS/MS 9.67 0.471 1 2 3 1810700 1810700 0 6830 1132 7067;7068 16925;16926;16927 12020;12021;12022 12021 885 3 1741400 0 ILMNSSR YAILNKEDDSKEKTKILMNSSRDNSHPFVG DDSKEKTKILMNSSRDNSHPFVGLAFKLEV K I L S R D 0 1 1 0 0 0 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 7 0 819.42727 Q96RP9 Q96RP9 341 347 GFM1 Elongation factor G, mitochondrial yes yes 2 0.022143 120.49 By MS/MS 5.33 0.471 2 1 3 1503800 1503800 0 6831 2247 7069;7070 16928;16929;16930 12023;12024 12024 2 44786 0 ILMVGLDAAGK ISSLFSRLFGKKQMRILMVGLDAAGKTTIL KQMRILMVGLDAAGKTTILYKLKLGEIVTT R I L G K T 2 0 0 1 0 0 0 2 0 1 2 1 1 0 0 0 0 0 0 1 0 0 11 0 1086.6107 P18085;P84077;P61204;P84085 P18085 20 30 ARF4;ARF1;ARF3;ARF5 ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5 no no 2 7.4031E-05 160.59 By MS/MS By matching 8.17 3.24 1 2 3 5 1 17974000 17936000 37455 6832 621;1093;1215 7071;7072 16931;16932;16933;16934;16935;16936 12025;12026;12027;12028;12029 12027 413 5 12951000 960700 ILNFGQVK PVCGLHSVISPSDGRILNFGQVKNCEVEQV ISPSDGRILNFGQVKNCEVEQVKGVTYSLE R I L V K N 0 0 1 0 0 1 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 917.53345 Q9UG56 Q9UG56 194 201 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.0066989 130.77 By MS/MS 8 0 1 1 4584500 4584500 0 6833 2770 7073 16937 12030 12030 1 302440 0 ILNHSVDK FYRYGIKPEWMMIHRILNHSVDKKGHVHYL EWMMIHRILNHSVDKKGHVHYLIKWRDLPY R I L D K K 0 0 1 1 0 0 0 0 1 1 1 1 0 0 0 1 0 0 0 1 0 0 8 0 924.50288 Q14839 Q14839 627 634 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.014976 113.26 By MS/MS 1.5 0.5 1 1 2 292550 292550 0 6834 1449 7074 16938;16939 12031 12031 1 14509 0 ILNIFGVIK KNVKLTVSNVLKEIKILNIFGVIKGFVEPD VLKEIKILNIFGVIKGFVEPDHYVVVGAQR K I L I K G 0 0 1 0 0 0 0 1 0 3 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1015.643 P02786 P02786 386 394 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.008691 107.66 By MS/MS 4 0 1 1 95220 95220 0 6835 437 7075 16940 12032 12032 1 2599.4 0 ILNNSGLPITSAIDLEDAAK LVVRLEGTNVQEAQKILNNSGLPITSAIDL GLPITSAIDLEDAAKKAVASVAKK______ K I L A K K 3 0 2 2 0 0 1 1 0 3 3 1 0 0 1 2 1 0 0 0 0 0 20 0 2054.0895 Q96I99 Q96I99 404 423 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 4.2391E-05 133.9 By MS/MS 7 0 1 1 430010 430010 0 6836 2200 7076 16941 12033 12033 1 7684.4 0 ILNVDEFVK CVLKVTQQSEKHLEKILNVDEFVKRIFSVI EKHLEKILNVDEFVKRIFSVIHSNDPVARA K I L V K R 0 0 1 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 2 0 0 9 0 1075.5914 Q9NVH2 Q9NVH2 97 105 INTS7 Integrator complex subunit 7 yes yes 2 0.002318 119.75 By MS/MS 4 0 1 1 339830 339830 0 6837 2652 7077 16942 12034 12034 1 9276.9 0 ILNVPQELYEK SGLRVDWQENDFSKRILNVPQELYEKGYVK FSKRILNVPQELYEKGYVKDVDDGLQAAEE R I L E K G 0 0 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 0 1 1 0 0 11 0 1344.7289 Q13085 Q13085 278 288 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 0.0066513 101.38 By MS/MS 1 0 1 1 269530 269530 0 6838 1332 7078 16943 12035 12035 1 13169 0 ILPEYLSNWTMEK TEVIQLFPEKGNMGKILPEYLSNWTMEKVR GKILPEYLSNWTMEKVRREGVKVMPNAIVQ K I L E K V 0 0 1 0 0 0 2 0 0 1 2 1 1 0 1 1 1 1 1 0 0 0 13 0 1622.8014 O95831 O95831 343 355 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.00013402 149.38 By MS/MS 5.5 0.5 1 1 2 3763100 3763100 0 6839 409 7079 16944;16945 12036;12037 12036 216 1 84041 0 ILPSLEDTLSLVK TLVKGTRRPVTCKIRILPSLEDTLSLVKRI IRILPSLEDTLSLVKRIERTGIAAIAVHGR R I L V K R 0 0 0 1 0 0 1 0 0 1 4 1 0 0 1 2 1 0 0 1 0 0 13 0 1426.8283 Q9NX74 Q9NX74 158 170 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 2 0.013299 90.913 By MS/MS 6 0 1 1 775660 775660 0 6840 2683 7080 16946 12038 12038 1 6048.6 0 ILPTLEAVAALGNK MTTGHNVADLVVILKILPTLEAVAALGNKV KILPTLEAVAALGNKVVESLRAQDPSEVLT K I L N K V 3 0 1 0 0 0 1 1 0 1 3 1 0 0 1 0 1 0 0 1 0 0 14 0 1408.829 Q12905 Q12905 128 141 ILF2 Interleukin enhancer-binding factor 2 yes yes 2 0.00013064 144.17 By MS/MS 7 0 1 1 129100 129100 0 6841 1314 7081 16947 12039 12039 1 2307.1 0 ILPVAASYSAVTR VDPNLDLSIRELVHRILPVAASYSAVTRFI HRILPVAASYSAVTRFIEEKSSFEYGQVNH R I L T R F 3 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 1 0 1 2 0 0 13 0 1346.7558 Q9BSJ2 Q9BSJ2 263 275 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.0032016 113.22 By MS/MS 4.5 0.5 1 1 2 2703300 2703300 0 6842 2338 7082 16948;16949 12040 12040 1 80597 0 ILPVLCGLTVDPEK AATHNLYSMNDCAQKILPVLCGLTVDPEKS KILPVLCGLTVDPEKSVRDQAFKAIRSFLS K I L E K S 0 0 0 1 1 0 1 1 0 1 3 1 0 0 2 0 1 0 0 2 0 0 14 0 1552.8535 Q96KG9 Q96KG9 507 520 SCYL1 N-terminal kinase-like protein yes yes 2 3.0585E-08 189.57 By MS/MS 4.5 1.12 1 1 1 1 4 8130800 8130800 0 6843 2220 7083 16950;16951;16952;16953 12041;12042 12041 2 288960 0 ILQDGGLQVVEK RKVLISDSLDPCCRKILQDGGLQVVEKQNL CRKILQDGGLQVVEKQNLSKEELIAELQDC K I L E K Q 0 0 0 1 0 2 1 2 0 1 2 1 0 0 0 0 0 0 0 2 0 0 12 0 1297.7242 O43175 O43175 22 33 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 4.3383E-07 193.62 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 41035000 40917000 118010 6844 185 7084 16954;16955;16956;16957;16958;16959 12043;12044;12045;12046 12044 4 1558100 361920 ILQDSLGGNCR EGSTYVPYRDSKMTRILQDSLGGNCRTTIV KMTRILQDSLGGNCRTTIVICCSPSSYNES R I L C R T 0 1 1 1 1 1 0 2 0 1 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1231.5979 P33176;Q12840;O60282 P33176 285 295 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 0.00031785 150.15 By MS/MS 4 0 1 1 4524200 4524200 0 6845 767 7085 16960 12047 12047 1 123510 0 ILQDSLGGR ERTPHVPYRESKLTRILQDSLGGRTRTSII ESKLTRILQDSLGGRTRTSIIATISPASLN R I L G R T 0 1 0 1 0 1 0 2 0 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 957.52434 P52732 P52732 319 327 KIF11 Kinesin-like protein KIF11 yes yes 2 0.0042986 122.28 By MS/MS 4 0 1 1 0 0 0 6846 990 7086 16961 12048 12048 1 0 0 ILQDVADEEIAALPR RLRINSLRKNTILPKILQDVADEEIAALPR ILQDVADEEIAALPRDSCPVRIRNRCVMTS K I L P R D 3 1 0 2 0 1 2 0 0 2 2 0 0 0 1 0 0 0 0 1 0 0 15 0 1651.8781 O60783 O60783 66 80 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 2 3.5053E-14 198.29 By MS/MS 10 0 1 1 3786600 3786600 0 6847 265 7087 16962 12049 12049 1 4024700 0 ILQEDPTNTAAR EAMERYDDAIQLYDRILQEDPTNTAARKRK YDRILQEDPTNTAARKRKIAIRKAQGKNVE R I L A R K 2 1 1 1 0 1 1 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 12 0 1327.6732 Q15006 Q15006 113 124 EMC2 ER membrane protein complex subunit 2 yes yes 2 0.0012828 130.1 By MS/MS By matching 8.33 0.471 2 1 2 1 6309600 6268800 40830 6848 1459 7088 16963;16964;16965 12050 12050 1 464380 348330 ILQEGVDPK YTTRCLAPMMSEVIRILQEGVDPKKLDSLT MSEVIRILQEGVDPKKLDSLTTSFGFPVGA R I L P K K 0 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 9 0 997.54441 P40939 P40939 561 569 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0066554 112.11 By MS/MS By matching 3.67 1.89 1 2 2 1 20472000 20390000 82469 6849 835 7089 16966;16967;16968 12051;12052 12052 2 840030 244030 ILQEHEQIK EERLRQEAKEREKERILQEHEQIKKKTVRE EREKERILQEHEQIKKKTVRERLEQIKKTE R I L I K K 0 0 0 0 0 2 2 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 9 0 1136.619 Q14152 Q14152 624 632 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00012352 169.09 By MS/MS By matching 3.6 0.8 3 1 1 4 1 21358000 21304000 53862 6850 1409 7090 16969;16970;16971;16972;16973 12053;12054;12055 12055 3 563770 77196 ILQEHEQIKK EERLRQEAKEREKERILQEHEQIKKKTVRE REKERILQEHEQIKKKTVRERLEQIKKTEL R I L K K K 0 0 0 0 0 2 2 0 1 2 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1264.7139 Q14152 Q14152 624 633 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.00046746 155.42 By MS/MS By matching 3.4 0.49 3 2 4 1 4101200 4067300 33925 6851 1409 7091 16974;16975;16976;16977;16978 12056;12057;12058 12056 3 106540 48621 ILQEHEQIKKK EERLRQEAKEREKERILQEHEQIKKKTVRE EKERILQEHEQIKKKTVRERLEQIKKTELG R I L K K T 0 0 0 0 0 2 2 0 1 2 1 3 0 0 0 0 0 0 0 0 0 0 11 2 1392.8089 Q14152 Q14152 624 634 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.017251 84.658 By MS/MS By matching 3.33 0.471 2 1 2 1 2241000 2225900 15135 6852 1409 7092 16979;16980;16981 12059 12059 1 58490 21691 ILQQSVVK ESLKELEEEAEEEQRILQQSVVKTYEDMTL EAEEEQRILQQSVVKTYEDMTLEELEDHED R I L V K T 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 0 8 0 913.55967 Q9H2J4 Q9H2J4 39 46 PDCL3 Phosducin-like protein 3 yes yes 2 0.0092911 121.09 By MS/MS 8 0 1 1 1630400 1630400 0 6853 2479 7093 16982 12060 12060 1 107560 0 ILQRVPGK ______________________________ TRAQVRRILQRVPGKQRFGIYRFLPFFFVL R I L G K Q 0 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 8 1 909.57599 Q8WVI0 Q8WVI0 10 17 SMIM4 Small integral membrane protein 4 yes yes 3 0.05301 73.616 By MS/MS 10 0 1 1 197930 197930 0 6854 2030 7094 16983 12061 12061 1 210380 0 ILREEGPK AGQTTYSGVIDCFRKILREEGPKALWKGAG VIDCFRKILREEGPKALWKGAGARVFRSSP K I L P K A 0 1 0 0 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 8 1 940.53418 Q9UJS0 Q9UJS0 569 576 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 0.01659 158.07 By MS/MS 5.33 0.471 2 1 3 19877000 19877000 0 6855 2798 7095 16984;16985;16986 12062;12063 12063 2 799210 0 ILREEGPSAFWK AGQTTYSGVIDCFRKILREEGPSAFWKGTA FRKILREEGPSAFWKGTAARVFRSSPQFGV K I L W K G 1 1 0 0 0 0 2 1 0 1 1 1 0 1 1 1 0 1 0 0 0 0 12 1 1431.751 O75746 O75746 567 578 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 3 0.037197 64.945 By MS/MS 5 0 1 1 1103900 1103900 0 6856 327 7096 16987 12064 12064 1 45376 0 ILSEVTPDQSKPEN EKIVLTHNRLKSLMKILSEVTPDQSKPEN_ KILSEVTPDQSKPEN_______________ K I L E N - 0 0 1 1 0 1 2 0 0 1 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1555.773 O43482 O43482 216 229 OIP5 Protein Mis18-beta yes yes 2 0.00044575 190.36 By MS/MS 9 0 1 1 471660 471660 0 6857 203 7097 16988 12065 12065 1 270690 0 ILSFVYPIR GNFDSQVGACGFNSRILSFVYPIRLVRVNE CGFNSRILSFVYPIRLVRVNEDTMELIRGP R I L I R L 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 1 0 0 9 0 1106.6488 Q6P1M0 Q6P1M0 409 417 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.003364 119.29 By MS/MS 1 0 1 1 157710 157710 0 6858 1701 7098 16989 12066 12066 1 7705.6 0 ILSGNFFLLK AATRREGFNDVVRGRILSGNFFLLKENYEN VVRGRILSGNFFLLKENYENYFVKAQKVRR R I L L K E 0 0 1 0 0 0 0 1 0 1 3 1 0 2 0 1 0 0 0 0 0 0 10 0 1150.675 Q9H0R6 Q9H0R6 377 386 QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 2 3.547E-05 172.94 By MS/MS 6 0 1 1 1121300 1121300 0 6859 2456 7099 16990 12067 12067 1 8743.9 0 ILSGSCPDPK SAAASGGLLKRRDRRILSGSCPDPKCQARL RRDRRILSGSCPDPKCQARLFFPASGSVSI R I L P K C 0 0 0 1 1 0 0 1 0 1 1 1 0 0 2 2 0 0 0 0 0 0 10 0 1072.5223 Q96JH7 Q96JH7 44 53 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.043512 113.18 By MS/MS 3 0 1 1 274480 274480 0 6860 2209 7100 16991 12068 12068 0 7165.4 0 ILSIAAEVAK ______________________________ GTDPRILSIAAEVAKSPEQNVPVILLKLKE R I L A K S 3 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1013.6121 Q15051 Q15051 10 19 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.02128 109.44 By MS/MS 5 0 1 1 410250 410250 0 6861 1472 7101 16992 12069 12069 1 16863 0 ILSLLEGQK SPDYERIINLRHFKRILSLLEGQKIAFGGE LRHFKRILSLLEGQKIAFGGETDEATRYIA R I L Q K I 0 0 0 0 0 1 1 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 0 999.59645 P51648 P51648 291 299 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 1;2 1.8213E-08 209.87 By MS/MS By matching 6.67 0.745 3 2 1 5 1 19505000 19472000 33120 6862 972 7102 16993;16994;16995;16996;16997;16998 12070;12071;12072;12073 12070 3 207110 101580 ILSQSTDSLNMR IAGHFNDESPLGLRRILSQSTDSLNMRNRT LRRILSQSTDSLNMRNRTLSVESLIDEAEV R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 Q92974 Q92974 170 181 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.0013035 123.01 By MS/MS 4 0 1 1 418860 418860 0 6863 2094 7103 16999 12074 12074 1367 1 11434 0 ILTAATDACR LDYSRDGLARVILSKILTAATDACRLYATK VILSKILTAATDACRLYATKHLRVLLRANV K I L C R L 3 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1090.5441 Q6R327 Q6R327 720 729 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.00087616 128.6 By MS/MS 3 0.816 1 1 1 3 584280 584280 0 6864 1722 7104 17000;17001;17002 12075 12075 1 21733 0 ILTDEAVSGWK CQRFFRDGLTISFTKILTDEAVSGWKFEIH SFTKILTDEAVSGWKFEIHRCIINNTHRLV K I L W K F 1 0 0 1 0 0 1 1 0 1 1 1 0 0 0 1 1 1 0 1 0 0 11 0 1217.6292 Q93008 Q93008 131 141 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0010579 132.88 By MS/MS 3 0.816 1 1 1 3 608220 608220 0 6865 2096 7105 17003;17004;17005 12076 12076 1 21257 0 ILTDIMWPIIAK KVLGSRVFGNKKQLKILTDIMWPIIAKLAR QLKILTDIMWPIIAKLAREEMDRAVAEGKR K I L A K L 1 0 0 1 0 0 0 0 0 4 1 1 1 0 1 0 1 1 0 0 0 0 12 0 1412.8101 Q13057 Q13057 439 450 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 2 3.4428E-05 169.41 By MS/MS 6 0 1 1 308100 308100 0 6866 1330 7106 17006 12077 12077 1 2402.6 0 ILTFDQLALDSPK VTSRARSRILRAGGKILTFDQLALDSPKGC GKILTFDQLALDSPKGCGTVLLSGPRKGRE K I L P K G 1 0 0 2 0 1 0 0 0 1 3 1 0 1 1 1 1 0 0 0 0 0 13 0 1459.7922 Q07020 Q07020 120 132 RPL18 60S ribosomal protein L18 yes yes 2 0.00020697 171.05 By MS/MS By matching 8.67 0.471 1 2 2 1 1300400 1242400 58042 6867 1278 7107 17007;17008;17009 12078;12079 12079 2 612020 625530 ILTGGADKNVVVFDK PGILALDLCPSDTNKILTGGADKNVVVFDK ILTGGADKNVVVFDKSSEQILATLKGHTKK K I L D K S 1 0 1 2 0 0 0 2 0 1 1 2 0 1 0 0 1 0 0 3 0 0 15 1 1574.8668 Q9UMS4 Q9UMS4 237 251 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.027523 122.97 By MS/MS 6 0 1 1 3785800 3785800 0 6868 2834 7108 17010 12080 12080 1 29522 0 ILTGLNYEAPK ITNDEPIPFWTFLSRILTGLNYEAPKYHIP FLSRILTGLNYEAPKYHIPYWVAYYLALLL R I L P K Y 1 0 1 0 0 0 1 1 0 1 2 1 0 0 1 0 1 0 1 0 0 0 11 0 1217.6656 Q15738 Q15738 282 292 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.0020123 120.27 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 39670000 39639000 30970 6869 1515 7109 17011;17012;17013;17014;17015 12081 12081 1 1200700 127140 ILTIEVK KRLNPDGKSIRNEDKILTIEVKKGWKEGTK KSIRNEDKILTIEVKKGWKEGTKITFPKEG K I L V K K 0 0 0 0 0 0 1 0 0 2 1 1 0 0 0 0 1 0 0 1 0 0 7 0 814.51641 P25685 P25685 203 209 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.020742 124.34 By MS/MS 7 0.816 1 1 1 3 1889300 1889300 0 6870 686 7110 17016;17017;17018 12082 12082 1 38216 0 ILTLTYVDK LDNQFELVFVVGFQKILTLTYVDKLIDDVH VVGFQKILTLTYVDKLIDDVHRLFRDKYRT K I L D K L 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 2 0 1 1 0 0 9 0 1064.6118 P08240 P08240 73 81 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.00024963 160.88 By MS/MS 5 0 1 1 1033600 1033600 0 6871 502 7111 17019 12083 12083 1 42487 0 ILTPIIFKEENLR RDRMIQVYFPKEGRKILTPIIFKEENLRTM RKILTPIIFKEENLRTMYSQDRHVDVLNLC K I L L R T 0 1 1 0 0 0 2 0 0 3 2 1 0 1 1 0 1 0 0 0 0 0 13 1 1584.9239 P82650 P82650 204 216 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.012397 123.01 By MS/MS 7 0 1 1 1310500 1310500 0 6872 1201 7112 17020 12084 12084 1 23419 0 ILTTIEDLDQKK DLMKKKRIVENDKSKILTTIEDLDQKKNQA KSKILTTIEDLDQKKNQALNIAWQKVNKDF K I L K K N 0 0 0 2 0 1 1 0 0 2 2 2 0 0 0 0 2 0 0 0 0 0 12 1 1415.7872 O95347 O95347 1015 1026 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2;3 1.4207E-06 184.71 By MS/MS 3 0 2 2 2725800 2725800 0 6873 385 7113 17021;17022 12085;12086 12086 2 71157 0 ILTTNTWSSELSK QALCAVYEHWVPREKILTTNTWSSELSKLA EKILTTNTWSSELSKLAANAFLAQRISSIN K I L S K L 0 0 1 0 0 0 1 0 0 1 2 1 0 0 0 3 3 1 0 0 0 0 13 0 1478.7617 O60701 O60701 208 220 UGDH UDP-glucose 6-dehydrogenase yes yes 2 0.0031751 122.18 By MS/MS 5 0.816 1 1 1 3 2148000 2148000 0 6874 259 7114 17023;17024;17025 12087 12087 1 30681 0 ILVAEGTR ATVGFESLEECYMAKILVAEGTRDVPIGAI EECYMAKILVAEGTRDVPIGAIICITVGKP K I L T R D 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 857.49707 P10515 P10515 148 155 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.038372 95.909 By MS/MS By matching 3.75 1.64 1 1 2 1 3 2757500 2621700 135710 6875 538 7115 17026;17027;17028;17029 12088 12088 1 107760 231770 ILVAQGGLGGK ENGKIIGELNKENDRILVAQGGLGGKLLTN ENDRILVAQGGLGGKLLTNFLPLKGQKRII R I L G K L 1 0 0 0 0 1 0 4 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1011.6077 A4D1E9 A4D1E9 116 126 GTPBP10 GTP-binding protein 10 yes yes 2 0.001955 120.87 By MS/MS 7 0 1 1 8415400 8415400 0 6876 14 7116 17030 12089 12089 1 150390 0 ILVATNLFGR ERLSRYQQFKDFQRRILVATNLFGRGMDIE DFQRRILVATNLFGRGMDIERVNIVFNYDM R I L G R G 1 1 1 0 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1102.6499 O00148;Q13838 O00148 339 348 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 4.9015E-07 189.38 By MS/MS 4.67 2.62 1 1 1 3 8346700 8346700 0 6877 70 7117 17031;17032;17033 12090;12091 12091 2 69603 0 ILVAVVK EKQTRTASDMVSTSRILVAVVKMCYEAKEW SDMVSTSRILVAVVKMCYEAKEWDLLNENI R I L V K M 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 3 0 0 7 0 740.51601 O00232 O00232 66 72 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.018381 130.84 By MS/MS 6.5 0.5 1 1 2 10514000 10514000 0 6878 81 7118 17034;17035 12092 12092 1 84192 0 ILVDQQVWK MEPCKNVHVLRTGFRILVDQQVWKIEDVFT LRTGFRILVDQQVWKIEDVFTLQVVMKCIG R I L W K I 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 0 0 1 0 2 0 0 9 0 1127.6339 Q9NYY8 Q9NYY8 295 303 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.01145 101.64 By MS/MS 6 0 1 1 3061300 3061300 0 6879 2701 7119 17036 12093 12093 1 23872 0 ILVGTNLVR SRDREKRERERQELRILVGTNLVRLSQLEG ERQELRILVGTNLVRLSQLEGVNVERYKQI R I L V R L 0 1 1 0 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 2 0 0 9 0 983.61277 Q96QK1 Q96QK1 218 226 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00015207 167.23 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 13781000 13781000 0 6880 2242 7120 17037;17038;17039;17040;17041;17042 12094;12095 12094 2 428580 0 ILVKKEELTLEGIR DVLEVTKKFMRDPIRILVKKEELTLEGIRQ RILVKKEELTLEGIRQFYINVEREEWKLDT R I L I R Q 0 1 0 0 0 0 3 1 0 2 3 2 0 0 0 0 1 0 0 1 0 0 14 2 1639.9873 P60842 P60842 234 247 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 6.8269E-08 182.25 By MS/MS 6.06 1.89 2 2 2 3 3 2 2 16 1138000000 1138000000 0 6881 1074 7121 17043;17044;17045;17046;17047;17048;17049;17050;17051;17052;17053;17054;17055;17056;17057;17058 12096;12097;12098;12099;12100;12101;12102;12103;12104;12105 12100 10 10927000 0 ILVLDDTNHER LDEDLAAYCRRRDIRILVLDDTNHERERLE RDIRILVLDDTNHERERLEQLFEMADQYQY R I L E R E 0 1 1 2 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1323.6783 P09543 P09543 118 128 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 6.7651E-07 183.67 By MS/MS 7 0.816 1 1 1 3 3295300 3295300 0 6882 516 7122 17059;17060;17061 12106 12106 1 60442 0 ILVLTELLER ESLDRPSYVASEESRILVLTELLERKAHSP SEESRILVLTELLERKAHSPFYQEGVSNAL R I L E R K 0 1 0 0 0 0 2 0 0 1 4 0 0 0 0 0 1 0 0 1 0 0 10 0 1197.7333 Q9NWX5 Q9NWX5 49 58 ASB6 Ankyrin repeat and SOCS box protein 6 yes yes 2 0.0010404 120.99 By MS/MS 6.5 0.5 1 1 2 118700 118700 0 6883 2674 7123 17062;17063 12107;12108 12107 2 1788.6 0 ILYDILAFAK KGQGTKEYEIHHGKKILYDILAFAKESVNS HHGKKILYDILAFAKESVNSHVTTLGPQNF K I L A K E 2 0 0 1 0 0 0 0 0 2 2 1 0 1 0 0 0 0 1 0 0 0 10 0 1165.6747 Q8IXB1 Q8IXB1 439 448 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 0.00082987 130.75 By MS/MS 6 0 1 1 318120 318120 0 6884 1870 7124 17064 12109 12109 1 2480.7 0 ILYEGTHLDPER QRIQERIAREEIKKKILYEGTHLDPERKHN KKKILYEGTHLDPERKHNGSSSN_______ K I L E R K 0 1 0 1 0 0 2 1 1 1 2 0 0 0 1 0 1 0 1 0 0 0 12 0 1441.7201 Q5RI15 Q5RI15 99 110 COX20 Cytochrome c oxidase protein 20 homolog yes yes 2;3 0.0082998 119.53 By MS/MS 10 0 2 2 904130 904130 0 6885 1614 7125 17065;17066 12110;12111 12111 2 960990 0 ILYIVASDPYSR GQNSCGVEDVLQLLRILYIVASDPYSRISQ LLRILYIVASDPYSRISQEDGDEQLQFTFP R I L S R I 1 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 0 0 2 1 0 0 12 0 1395.7398 Q9ULT8 Q9ULT8 2006 2017 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00036121 175.93 By MS/MS 2.5 1.12 1 1 1 1 4 1731200 1731200 0 6886 2826 7126 17067;17068;17069;17070 12112;12113;12114 12114 3 60060 0 ILYMTDEVNDPSLTIK LPAIILVLIALPSLRILYMTDEVNDPSLTI LYMTDEVNDPSLTIKSIGHQWYWTYEYTDY R I L I K S 0 0 1 2 0 0 1 0 0 2 2 1 1 0 1 1 2 0 1 1 0 0 16 0 1850.9336 P00403 P00403 83 98 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 1.7718E-63 296.28 By MS/MS 9.33 0.471 2 1 3 3929300 3929300 0 6887 428 7127;7128 17071;17072;17073 12115;12116 12115 227 2 2330400 0 ILYYSGYTR IMAHIDAGKTTTTERILYYSGYTRSLGDVD TTTTERILYYSGYTRSLGDVDDGDTVTDFM R I L T R S 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 1 1 0 3 0 0 0 9 0 1134.571 Q969S9 Q969S9 90 98 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.002198 127.68 By MS/MS 5 0 1 1 2721600 2721600 0 6888 2107 7129 17074 12117 12117 1 111870 0 IMADNPSWDGEK ESPQLSPQDVTTHAKIMADNPSWDGEKTII HAKIMADNPSWDGEKTIIITCSFTPGSCTL K I M E K T 1 0 1 2 0 0 1 1 0 1 0 1 1 0 1 1 0 1 0 0 0 0 12 0 1361.5922 Q6P2Q9 Q6P2Q9 2199 2210 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0056197 103.08 By MS/MS 2 0 1 1 320860 320860 0 6889 1706 7130 17075 12118 12118 1 15948 0 IMASSPDMDLATVSALR LAKGFTAAGVLAAHKIMASSPDMDLATVSA ASSPDMDLATVSALRKMGVKLTPHNKETVQ K I M L R K 3 1 0 2 0 0 0 0 0 1 2 0 2 0 1 3 1 0 0 1 0 0 17 0 1776.875 P32322 P32322 30 46 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 2.5631E-33 235.73 By MS/MS 8.5 0.764 4 1 1 6 9757300 9757300 0 6890 764 7131;7132;7133 17076;17077;17078;17079;17080;17081 12119;12120;12121;12122 12121 517;518 4 781010 0 IMASSPDMDLATVSALRK LAKGFTAAGVLAAHKIMASSPDMDLATVSA SSPDMDLATVSALRKMGVKLTPHNKETVQH K I M R K M 3 1 0 2 0 0 0 0 0 1 2 1 2 0 1 3 1 0 0 1 0 0 18 1 1904.97 P32322 P32322 30 47 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 3 0.036537 46.249 By MS/MS 8.5 0.5 1 1 2 6463900 6463900 0 6891 764 7134 17082;17083 12123 12123 517;518 1 458420 0 IMDPNIVGSEHYDVAR LGIYPAVDPLDSTSRIMDPNIVGSEHYDVA MDPNIVGSEHYDVARGVQKILQDYKSLQDI R I M A R G 1 1 1 2 0 0 1 1 1 2 0 0 1 0 1 1 0 0 1 2 0 0 16 0 1814.8621 P06576 P06576 407 422 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 1.069E-07 165.78 By MS/MS By MS/MS 6.83 1.46 4 1 1 5 1 45774000 45558000 215990 6892 478 7135;7136 17084;17085;17086;17087;17088;17089 12124;12125;12126;12127;12128;12129 12127 267 6 1533800 662430 IMEFTTTLLNTSPEGWK EGERYNYSKCTVVVRIMEFTTTLLNTSPEG EFTTTLLNTSPEGWKLLKKDLCNTHLMRVL R I M W K L 0 0 1 0 0 0 2 1 0 1 2 1 1 1 1 1 4 1 0 0 0 0 17 0 1966.971 P78527 P78527 1341 1357 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00019571 128.21 By MS/MS 2 0.816 1 1 1 3 199630 199630 0 6893 1197 7137 17090;17091;17092 12130 12130 958 1 8348.2 0 IMEGPAFNFLDAPAVR GGWPQFGVGAEICARIMEGPAFNFLDAPAV MEGPAFNFLDAPAVRVTGADVPMPYAKILE R I M V R V 3 1 1 1 0 0 1 1 0 1 1 0 1 2 2 0 0 0 0 1 0 0 16 0 1746.8763 P11177 P11177 309 324 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2;3 7.5294E-29 234.87 By MS/MS 6.08 2.7 1 1 1 1 1 3 3 1 1 13 60153000 60153000 0 6894 549 7138;7139 17093;17094;17095;17096;17097;17098;17099;17100;17101;17102;17103;17104;17105 12131;12132;12133;12134;12135;12136;12137;12138;12139;12140;12141;12142;12143;12144;12145;12146;12147;12148 12140 343 17 2911200 0 IMELDSNDGLLK LSDSRSGLCIEASSRIMELDSNDGLLKVHY SSRIMELDSNDGLLKVHYSDRLVILLREVR R I M L K V 0 0 1 2 0 0 1 1 0 1 3 1 1 0 0 1 0 0 0 0 0 0 12 0 1346.6752 Q8NCM8 Q8NCM8 561 572 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0051334 101.97 By MS/MS 1 0 1 1 0 0 0 6895 1954 7140 17106 12149 12149 1 0 0 IMENNLENELK ALDEHLFPVRIGDMRIMENNLENELKSSIS GDMRIMENNLENELKSSISALNSSQLEPVV R I M L K S 0 0 3 0 0 0 3 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 11 0 1345.6548 Q96N67 Q96N67 761 771 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.7312E-07 208.84 By MS/MS 2 0.816 1 1 1 3 1584600 1584600 0 6896 2230 7141 17107;17108;17109 12150;12151 12150 2 66884 0 IMESFKNMVPQQALVIR ITGCFSYYQEAKSSKIMESFKNMVPQQALV ESFKNMVPQQALVIRNGEKMSINAEEVVVG K I M I R N 1 1 1 0 0 2 1 0 0 2 1 1 2 1 1 1 0 0 0 2 0 0 17 1 2003.0696 P05023;Q13733;P13637 P05023 157 173 ATP1A1;ATP1A4;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-3 no no 3 0.01548 62.237 By MS/MS 1 0 1 1 159970 159970 0 6897 463;575 7142 17110 12152 12152 249;250 1 7815.7 0 IMFEVQDLK TLPNGERLSLPPNVRIMFEVQDLKYATLAT LPPNVRIMFEVQDLKYATLATVSRCGMVWF R I M L K Y 0 0 0 1 0 1 1 0 0 1 1 1 1 1 0 0 0 0 0 1 0 0 9 0 1121.5791 Q14204 Q14204 2341 2349 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0038742 118.18 By MS/MS 2.17 1.07 2 2 1 1 6 2840900 2840900 0 6898 1421 7143;7144 17111;17112;17113;17114;17115;17116 12153;12154;12155;12156 12155 1106 4 136320 0 IMGIPEEEQMGLLR QQDKDMFQETMEAMRIMGIPEEEQMGLLRV RIMGIPEEEQMGLLRVISGVLQLGNIVFKK R I M L R V 0 1 0 0 0 1 3 2 0 2 2 0 2 0 1 0 0 0 0 0 0 0 14 0 1614.8109 P35579 P35579 328 341 MYH9 Myosin-9 yes yes 2 0.0012443 103.22 By MS/MS 2 0 1 1 247380 247380 0 6899 793 7145 17117 12157 12157 539;540 1 12296 0 IMGPNYTPGK GRVFSGLVSTGLKVRIMGPNYTPGKKEDLY GLKVRIMGPNYTPGKKEDLYLKPIQRTILM R I M G K K 0 0 1 0 0 0 0 2 0 1 0 1 1 0 2 0 1 0 1 0 0 0 10 0 1076.5325 P13639 P13639 429 438 EEF2 Elongation factor 2 yes yes 2 0.0030053 111.06 By MS/MS By matching 4 0 3 2 1 5614200 5581600 32638 6900 576 7146;7147 17118;17119;17120 12158;12159 12158 369 2 152370 68199 IMGPNYTPGKK GRVFSGLVSTGLKVRIMGPNYTPGKKEDLY LKVRIMGPNYTPGKKEDLYLKPIQRTILMM R I M K K E 0 0 1 0 0 0 0 2 0 1 0 2 1 0 2 0 1 0 1 0 0 0 11 1 1204.6274 P13639 P13639 429 439 EEF2 Elongation factor 2 yes yes 3 0.0009951 102.95 By MS/MS 4 0 1 1 0 0 0 6901 576 7148 17121 12160 12160 369 1 0 0 IMGVAGGLTNLSK APNLSIIIGASTAAKIMGVAGGLTNLSKMP AKIMGVAGGLTNLSKMPACNIMLLGAQRKT K I M S K M 1 0 1 0 0 0 0 3 0 1 2 1 1 0 0 1 1 0 0 1 0 0 13 0 1259.6908 Q8WWY3 Q8WWY3 231 243 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 0.0071255 94.767 By MS/MS 6 0 1 1 170670 0 170670 6902 2043 7149 17122 12161 12161 1330 1 0 523430 IMHQTVK GVDGTLYKLHPHFSRIMHQTVKELSPKCNV KLHPHFSRIMHQTVKELSPKCNVSFLLSED R I M V K E 0 0 0 0 0 1 0 0 1 1 0 1 1 0 0 0 1 0 0 1 0 0 7 0 855.46366 P19367 P19367 874 880 HK1 Hexokinase-1 yes yes 2 0.021582 113.89 By MS/MS 4 0 1 1 156140 156140 0 6903 630 7150 17123 12162 12162 422 1 4262.3 0 IMIPLKTSPLQ LVYYTVPLIQEMESRIMIPLKTSPLQ____ MESRIMIPLKTSPLQ_______________ R I M L Q - 0 0 0 0 0 1 0 0 0 2 2 1 1 0 2 1 1 0 0 0 0 0 11 1 1239.7261 O75323 O75323 276 286 GBAS Protein NipSnap homolog 2 yes yes 2 0.017037 157.99 By MS/MS By matching 8 0 2 1 1 14153000 14125000 27454 6904 296 7151 17124;17125 12163 12163 164 1 931840 234210 IMLKGDNITLLQSVSN EEIHSKTKSRKQLGRIMLKGDNITLLQSVS MLKGDNITLLQSVSN_______________ R I M S N - 0 0 2 1 0 1 0 1 0 2 3 1 1 0 0 2 1 0 0 1 0 0 16 1 1744.9393 P62304 P62304 77 92 SNRPE Small nuclear ribonucleoprotein E yes yes 2 4.236E-08 184.96 By MS/MS 10 0 1 1 1667100 1667100 0 6905 1128 7152 17126 12164 12164 882 1 1771900 0 IMLNTPEDVQALVSGK SPKAITSLKYMLLCKIMLNTPEDVQALVSG MLNTPEDVQALVSGKLALRYAGRQTEALKC K I M G K L 1 0 1 1 0 1 1 1 0 1 2 1 1 0 1 1 1 0 0 2 0 0 16 0 1713.8971 O00231 O00231 259 274 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 5.0953E-29 240.42 By MS/MS 6.5 0.5 1 1 2 4545200 4545200 0 6906 80 7153 17127;17128 12165 12165 44 1 76931 0 IMLPWDPTGK RHVLLRQGVLGIKVKIMLPWDPTGKIGPKK GIKVKIMLPWDPTGKIGPKKPLPDHVSIVE K I M G K I 0 0 0 1 0 0 0 1 0 1 1 1 1 0 2 0 1 1 0 0 0 0 10 0 1156.5951 P23396 P23396 188 197 RPS3 40S ribosomal protein S3 yes yes 2 0.048907 73.985 By MS/MS By matching 8 0 2 1 1 2310000 2282100 27893 6907 668 7154 17129;17130 12166 12166 1 150550 237960 IMNTFSVMPSPK GTLLISKIREEYPDRIMNTFSVMPSPKVSD PDRIMNTFSVMPSPKVSDTVVEPYNATLSV R I M P K V 0 0 1 0 0 0 0 0 0 1 0 1 2 1 2 2 1 0 0 1 0 0 12 0 1350.6676 Q13885;Q9BVA1;Q9BUF5 Q13885 163 174 TUBB2A;TUBB2B;TUBB6 Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 2 5.6213E-10 193.96 By MS/MS 6.5 0.5 1 1 2 2865500 2865500 0 6908 1400;2375;2363 7155;7156 17131;17132 12167;12168 12168 1074;1075 2 22345 0 IMNTFSVVPSPK GTLLISKIREEYPDRIMNTFSVVPSPKVSD PDRIMNTFSVVPSPKVSDTVVEPYNATLSV R I M P K V 0 0 1 0 0 0 0 0 0 1 0 1 1 1 2 2 1 0 0 2 0 0 12 0 1318.6955 P07437;P68371;P04350;Q13509 P68371 163 174 TUBB;TUBB4B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 2 5.3777E-24 242.97 By MS/MS By MS/MS 6.12 2.32 1 1 1 1 4 5 2 1 1 15 2 337790000 336550000 1242400 6909 1187;490;451;1377 7157;7158 17133;17134;17135;17136;17137;17138;17139;17140;17141;17142;17143;17144;17145;17146;17147;17148;17149 12169;12170;12171;12172;12173;12174;12175;12176;12177;12178;12179;12180;12181;12182;12183;12184;12185;12186;12187;12188;12189;12190 12187 233;279 21 4436600 3962200 IMNVIGEPIDER GAPIKIPVGPETLGRIMNVIGEPIDERGPI LGRIMNVIGEPIDERGPIKTKQFAPIHAEA R I M E R G 0 1 1 1 0 0 2 1 0 3 0 0 1 0 1 0 0 0 0 1 0 0 12 0 1384.7021 P06576 P06576 144 155 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.00029997 178.46 By MS/MS By MS/MS 7.88 1.36 2 1 2 2 1 6 2 5532600 5217600 315000 6910 478 7159;7160 17150;17151;17152;17153;17154;17155;17156;17157 12191;12192;12193;12194;12195 12195 268 5 418690 966080 IMNVIGEPIDERGPIK GAPIKIPVGPETLGRIMNVIGEPIDERGPI MNVIGEPIDERGPIKTKQFAPIHAEAPEFM R I M I K T 0 1 1 1 0 0 2 2 0 4 0 1 1 0 2 0 0 0 0 1 0 0 16 1 1779.9553 P06576 P06576 144 159 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 5.6123E-28 240.18 By MS/MS By matching 6.6 0.8 3 1 1 4 1 40657000 40516000 141440 6911 478 7161;7162 17158;17159;17160;17161;17162 12196;12197;12198;12199;12200 12199 268 5 499100 433790 IMQEYQLEQK LNNHKLFPETWTAEKIMQEYQLEQKDVNSL WTAEKIMQEYQLEQKDVNSLLKYFVTFEVE K I M Q K D 0 0 0 0 0 3 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 10 0 1308.6384 Q9P032 Q9P032 138 147 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 0.00023289 151.22 By MS/MS 8.5 0.5 1 1 2 1266100 1266100 0 6912 2722 7163 17163;17164 12201 12201 1586 1 650810 0 IMQSSSEVGYDAMAGDFVNMVEK IAKNAGVEGSLIVEKIMQSSSEVGYDAMAG GYDAMAGDFVNMVEKGIIDPTKVVRTALLD K I M E K G 2 0 1 2 0 1 2 2 0 1 0 1 3 1 0 3 0 0 1 3 0 0 23 0 2507.1018 P10809 P10809 494 516 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.5352E-11 170.79 By MS/MS 6 0 6 6 15223000 15223000 0 6913 544 7164;7165;7166 17165;17166;17167;17168;17169;17170 12202;12203;12204;12205;12206;12207 12206 325;326 5 118710 0 IMVANIEEVLQR RNLGSINTELQDVQRIMVANIEEVLQRGEA VQRIMVANIEEVLQRGEALSALDSKANNLS R I M Q R G 1 1 1 0 0 1 2 0 0 2 1 0 1 0 0 0 0 0 0 2 0 0 12 0 1413.765 O75396 O75396 148 159 SEC22B Vesicle-trafficking protein SEC22b yes yes 2;3 1.1955E-16 219.5 By MS/MS 8.67 0.471 1 2 3 2679000 2679000 0 6914 304 7167 17171;17172;17173 12208;12209;12210 12208 166 2 1168000 0 IMVIKDIEREDIEFICK DALSDLALHFLNKMKIMVIKDIEREDIEFI VIKDIEREDIEFICKTIGTKPVAHIDQFTA K I M C K T 0 1 0 2 1 0 3 0 0 5 0 2 1 1 0 0 0 0 0 1 0 0 17 2 2150.1115 P50991 P50991 322 338 CCT4 T-complex protein 1 subunit delta yes yes 3;4 0.024438 76.01 By MS/MS 6 0 2 2 21121000 21121000 0 6915 956 7168 17174;17175 12211;12212 12211 715 2 164700 0 INAQLPLTDK LMRRNSLNRKDAEARINAQLPLTDKARMAR DAEARINAQLPLTDKARMARHVLDNSGEWS R I N D K A 1 0 1 1 0 1 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 10 0 1111.6237 Q8WVC6 Q8WVC6 159 168 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 1.7851E-10 200.6 By MS/MS 6.67 4.03 1 1 1 3 6734700 6734700 0 6916 2028 7169 17176;17177;17178 12213;12214 12214 2 3821300 0 INEAKDLLEGQAK LNHPDKGGSPYIAAKINEAKDLLEGQAKK_ AKINEAKDLLEGQAKK______________ K I N A K K 2 0 1 1 0 1 2 1 0 1 2 2 0 0 0 0 0 0 0 0 0 0 13 1 1427.762 Q96DA6 Q96DA6 103 115 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 2 1.1554E-06 182.25 By MS/MS By matching 9 0.816 1 1 1 2 1 826000 768150 57849 6917 2149 7170 17179;17180;17181 12215 12215 1 723140 493520 INEAVECLLSLK EVVRKLKAEKSPKAKINEAVECLLSLKAQY KAKINEAVECLLSLKAQYKEKTGKEYIPGQ K I N L K A 1 0 1 0 1 0 2 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1387.7381 P07814 P07814 850 861 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 9.1474E-17 226.04 By MS/MS 3.8 0.748 2 2 1 5 4588100 4588100 0 6918 493 7171 17182;17183;17184;17185;17186 12216;12217;12218 12216 3 122220 0 INEENTAISR SVHSRLGIIYNPTSKINEENTAISRGILAA NPTSKINEENTAISRGILAAFLTQKNMFLR K I N S R G 1 1 2 0 0 0 2 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1145.5677 Q9NYU1 Q9NYU1 783 792 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 1.1682E-07 194.12 By MS/MS 3 1.41 1 1 1 1 1 5 1755300 1755300 0 6919 2698 7172 17187;17188;17189;17190;17191 12219 12219 1 60736 0 INEGIGQGDLSELPELHALTAGLK AFQFVGAYMKETYHRINEGIGQGDLSELPE LSELPELHALTAGLKAFTSWTANTGIEACR R I N L K A 2 0 1 1 0 1 3 4 1 2 5 1 0 0 1 1 1 0 0 0 0 0 24 0 2474.3017 Q15067 Q15067 355 378 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 3 0.0010487 95.195 By MS/MS 6 0 1 1 978650 978650 0 6920 1476 7173 17192 12220 12220 1 7631.5 0 INEILSNALK MENMGRFGSGMNMGRINEILSNALKRGEII MNMGRINEILSNALKRGEIIAKQGGGGGGG R I N L K R 1 0 2 0 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1113.6394 P52272 P52272 372 381 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 3.1275E-06 176.6 By MS/MS 6 0.816 1 1 1 3 11035000 11035000 0 6921 982 7174 17193;17194;17195 12221 12221 1 412750 0 INEINTEINQLIEK EPAMGHSDLLELESKINEINTEINQLIEKK KINEINTEINQLIEKKMMRNEPIEGKLSLY K I N E K K 0 0 3 0 0 1 3 0 0 4 1 1 0 0 0 0 1 0 0 0 0 0 14 0 1669.8887 Q8WYA0 Q8WYA0 316 329 IFT81 Intraflagellar transport protein 81 homolog yes yes 2 0.00090103 143.42 By MS/MS 5 0 1 1 183850 183850 0 6922 2050 7175 17196 12222 12222 1 7557 0 INEKPQVIADYESGR GRQSKGLTQKDLATKINEKPQVIADYESGR INEKPQVIADYESGRAIPNNQVLGKIERAI K I N G R A 1 1 1 1 0 1 2 1 0 2 0 1 0 0 1 1 0 0 1 1 0 0 15 1 1717.8635 O60869 O60869 99 113 EDF1 Endothelial differentiation-related factor 1 yes yes 3 0.0059741 87.99 By MS/MS 10 0 1 1 431940 431940 0 6923 272 7176 17197 12223 12223 1 459110 0 INELQAELQAFK DHQETQAELQKKEAKINELQAELQAFKSQF EAKINELQAELQAFKSQFGALPADCNIPLP K I N F K S 2 0 1 0 0 2 2 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1402.7456 Q9NSV4 Q9NSV4 537 548 DIAPH3 Protein diaphanous homolog 3 yes yes 2 1.0904E-16 224.66 By MS/MS 4 0.816 1 1 1 3 1206200 1206200 0 6924 2628 7177 17198;17199;17200 12224;12225 12224 2 33686 0 INEMVHFDLPGQEER ASNQPEQFDWAINDRINEMVHFDLPGQEER INEMVHFDLPGQEERERLVRMYFDKYVLKP R I N E R E 0 1 1 1 0 1 3 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 15 0 1812.8465 Q9NVI7 Q9NVI7 515 529 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 3 0.0064184 93.909 By MS/MS 5.5 0.5 1 1 2 1777500 1777500 0 6925 2655 7178 17201;17202 12226 12226 1567 1 42791 0 INEWLTLVEK EVMFKTPVSITEHPKINEWLTLVEKEMRVT TEHPKINEWLTLVEKEMRVTLAKLLAESVT K I N E K E 0 0 1 0 0 0 2 0 0 1 2 1 0 0 0 0 1 1 0 1 0 0 10 0 1243.6812 Q14204 Q14204 1698 1707 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0047005 108.43 By MS/MS 1 0 1 1 96128 96128 0 6926 1421 7179 17203 12227 12227 1 4696.6 0 INFDSNSAYR MVEDSDGAVLCMDAKINFDSNSAYRQKKIF CMDAKINFDSNSAYRQKKIFDLQDWTQEDE K I N Y R Q 1 1 2 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 0 10 0 1185.5415 Q9P2R7 Q9P2R7 275 284 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.00014345 185.33 By MS/MS 7 0 1 1 15856000 15856000 0 6927 2741 7180 17204 12228 12228 1 283340 0 INGCAIQCR GRSLPDLGLRQENIRINGCAIQCRVTTEDP RQENIRINGCAIQCRVTTEDPARSFQPDTG R I N C R V 1 1 1 0 2 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1090.5012 P11498 P11498 369 377 PC Pyruvate carboxylase, mitochondrial yes yes 2 3.6277E-06 182.68 By MS/MS 4 0 1 1 430620 430620 0 6928 555 7181 17205 12229 12229 1 11755 0 INGDWQR CDRDQMYYNLLKLYKINGDWQRADAVWNKI YNLLKLYKINGDWQRADAVWNKIQEENVIP K I N Q R A 0 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 7 0 887.42496 P42704 P42704 967 973 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.015477 138.83 By MS/MS 3.5 0.5 1 1 2 10804000 10804000 0 6929 854 7182 17206;17207 12230;12231 12230 2 282790 0 INGKDSIEKEHVEEISELFYDAK RYSVQLLTPANLLAKINGKDSIEKEHVEEI KEHVEEISELFYDAKSSAKILADQQDKYMK K I N A K S 1 0 1 2 0 0 5 1 1 3 1 3 0 1 0 2 0 0 1 1 0 0 23 2 2692.3232 Q9Y265 Q9Y265 419 441 RUVBL1 RuvB-like 1 yes yes 4 0.021417 50.132 By MS/MS 6 0 1 1 8513600 8513600 0 6930 2870 7183 17208 12232 12232 1 66389 0 INHEGEVNR GGFGSVSGKIEIEIKINHEGEVNRARYMPQ IEIEIKINHEGEVNRARYMPQNPCIIATKT K I N N R A 0 1 2 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1066.5156 Q09028;Q16576 Q09028 121 129 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2;3 0.0020886 128.86 By MS/MS By matching 7.33 1.15 3 2 2 2 8 1 15009000 15001000 8824.4 6931 1296;1541 7184 17209;17210;17211;17212;17213;17214;17215;17216;17217 12233;12234 12233 2 204980 27064 INISEGNCPER KGESVKRIREESGARINISEGNCPERIITL SGARINISEGNCPERIITLTGPTNAIFKAF R I N E R I 0 1 2 0 1 0 2 1 0 2 0 0 0 0 1 1 0 0 0 0 0 0 11 0 1287.5877 P57721;Q15365;Q15366 Q15365 47 57 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 2 2.8524E-07 190.57 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 58201000 58078000 122390 6932 1490;1491;1055 7185 17218;17219;17220;17221;17222;17223 12235;12236;12237;12238;12239 12236 5 2070000 696830 INKQHAR GFNEDMAIEAQQKFKINKQHARRVYEILRL IEAQQKFKINKQHARRVYEILRLLVTDMSD K I N A R R 1 1 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 7 1 865.48823 O14929 O14929 323 329 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.049324 170.31 By MS/MS 7 0 1 1 47460 47460 0 6933 134 7186 17224 12240 12240 1 848.11 0 INLIAPPR LRAGLNCSTENMPIKINLIAPPRYVMTTTT TENMPIKINLIAPPRYVMTTTTLERTEGLS K I N P R Y 1 1 1 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 8 0 892.54944 P05198 P05198 227 234 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.012435 116.54 By MS/MS 7.5 0.5 1 1 2 1549700 1549700 0 6934 471 7187 17225;17226 12241 12241 1 55203 0 INLIDLAGSER EFVEGEEHDHRITSRINLIDLAGSERCSTA ITSRINLIDLAGSERCSTAHTNGDRLKEGV R I N E R C 1 1 1 1 0 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1199.651 Q15058 Q15058 599 609 KIF14 Kinesin-like protein KIF14 yes yes 2 8.8825E-11 204.56 By MS/MS 3 0 1 1 1191700 1191700 0 6935 1475 7188 17227 12242 12242 1 31110 0 INLPAPNPDHVGGYK GGVKPMGSEPVPKSRINLPAPNPDHVGGYK INLPAPNPDHVGGYKLAVATFAGIENKFGL R I N Y K L 1 0 2 1 0 0 0 2 1 1 1 1 0 0 3 0 0 0 1 1 0 0 15 0 1590.8154 Q9UJS0 Q9UJS0 627 641 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 4.879E-07 160.86 By MS/MS 5 0 1 1 1870100 1870100 0 6936 2798 7189 17228 12243 12243 1 76869 0 INLVLSR TWFSIPEKNRPLKGRINLVLSRELKEPPQG KNRPLKGRINLVLSRELKEPPQGAHFLSRS R I N S R E 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 813.50724 P00374;Q86XF0 P00374 72 78 DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 2 0.022155 120.46 By MS/MS 8.5 0.5 1 1 2 1803500 1803500 0 6937 426 7190 17229;17230 12244 12244 1 948820 0 INMLVIELK ASYEFVQRLLKGYMKINMLVIELKSEALKD LKGYMKINMLVIELKSEALKDRHWKQLMKR K I N L K S 0 0 1 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 0 1 0 0 9 0 1071.6362 Q14204 Q14204 1396 1404 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 5.1444E-05 172.23 By MS/MS 1 0 1 1 508380 508380 0 6938 1421 7191 17231 12245 12245 1107 1 24838 0 INNIAVAVGK GHFEFHGDHALLCVRINNIAVAVGKEAKLY LLCVRINNIAVAVGKEAKLYLFQAQEWLKL R I N G K E 2 0 2 0 0 0 0 1 0 2 0 1 0 0 0 0 0 0 0 2 0 0 10 0 997.59203 Q86V85 Q86V85 58 67 GPR180 Integral membrane protein GPR180 yes yes 2 1.6389E-05 145.16 By MS/MS 1 0 1 1 255390 255390 0 6939 1826 7192 17232 12246 12246 0 12478 0 INNVPAEGENEVNNELANR QNDFSYYRRTLSRMRINNVPAEGENEVNNE PAEGENEVNNELANRMSLFYAEATPMLKTL R I N N R M 2 1 6 0 0 0 4 1 0 1 1 0 0 0 1 0 0 0 0 2 0 0 19 0 2094.993 Q9NUQ9 Q9NUQ9 168 186 FAM49B Protein FAM49B yes yes 2 1.7357E-14 180.74 By MS/MS 8 0 1 1 1573300 1573300 0 6940 2642 7193 17233 12247 12247 1 103790 0 INQLPEAER SNNKENITIVDISRKINQLPEAERNLLENG VDISRKINQLPEAERNLLENGSVYVGLNAA K I N E R N 1 1 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 9 0 1068.5564 Q9H061 Q9H061 21 29 TMEM126A Transmembrane protein 126A yes yes 2 0.00021894 162.88 By MS/MS 9 0 1 1 2027500 2027500 0 6941 2447 7194 17234 12248 12248 1 1163600 0 INQMATAPDSQR GFSRSNPYYIVKQGKINQMATAPDSQRLKL QGKINQMATAPDSQRLKLLREVAGTRVYDE K I N Q R L 2 1 1 1 0 2 0 0 0 1 0 0 1 0 1 1 1 0 0 0 0 0 12 0 1330.6299 Q9UQE7 Q9UQE7 144 155 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.4753E-05 172.21 By MS/MS 2.5 0.5 1 1 2 438650 438650 0 6942 2860 7195 17235;17236 12249 12249 1645 1 13408 0 INQNLHR TLYLGFHRLHDQMVKINQNLHRLQVAWRDA RLHDQMVKINQNLHRLQVAWRDAQQSSSPA K I N H R L 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 893.48315 Q14139 Q14139 532 538 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.030534 114.59 By MS/MS 3 0 1 1 163610 163610 0 6943 1408 7196 17237 12250 12250 1 4271 0 INQQEEPGFEVITR SEMADFLSDAIPGLKINQQEEPGFEVITRI KINQQEEPGFEVITRIDLGERPVVQRREPV K I N T R I 0 1 1 0 0 2 3 1 0 2 0 0 0 1 1 0 1 0 0 1 0 0 14 0 1658.8264 Q8TC07 Q8TC07 289 302 TBC1D15 TBC1 domain family member 15 yes yes 2 4.1764E-09 225.79 By MS/MS 5 0 1 1 4674400 4674400 0 6944 1991 7197 17238 12251 12251 1 192140 0 INQVFHGSCITEGNELTK YSRLPKDDVHAKESKINQVFHGSCITEGNE VFHGSCITEGNELTKTLIKLCYDAFTENMA K I N T K T 0 0 2 0 1 1 2 2 1 2 1 1 0 1 0 1 2 0 0 1 0 0 18 0 2045.984 P78527 P78527 1896 1913 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 5.4457E-07 147.75 By MS/MS 1.8 0.748 2 2 1 5 4451700 4451700 0 6945 1197 7198 17239;17240;17241;17242;17243 12252;12253;12254 12253 3 214150 0 INSFYAFEVK TVTLFLLQLKFLKPKINSFYAFEVKDAKGR FLKPKINSFYAFEVKDAKGRTVSLEKYKGK K I N V K D 1 0 1 0 0 0 1 0 0 1 0 1 0 2 0 1 0 0 1 1 0 0 10 0 1216.6128 Q8TED1 Q8TED1 44 53 GPX8 Probable glutathione peroxidase 8 yes yes 2 1.8678E-21 260.04 By MS/MS 9 0 1 1 1280200 1280200 0 6946 2001 7199 17244 12255 12255 1 734710 0 INSTATPDQDR SEAKTRMAMFKKSLRINSTATPDQDRDKIK KSLRINSTATPDQDRDKIKQFAAQEEKRQK R I N D R D 1 1 1 2 0 1 0 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 11 0 1216.5684 Q9H2G2 Q9H2G2 1092 1102 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.00012478 158.08 By MS/MS 2 0 1 1 354060 354060 0 6947 2476 7200 17245 12256 12256 1 17599 0 INTLGWTSR EFLQEKEVFKEFIYRINTLGWTSRTQFEET KEFIYRINTLGWTSRTQFEETWATLLGVLV R I N S R T 0 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 2 1 0 0 0 0 9 0 1046.5509 P42858 P42858 2453 2461 HTT Huntingtin yes yes 2 0.007699 109.83 By MS/MS 1 0 1 1 177770 177770 0 6948 858 7201 17246 12257 12257 1 8685.4 0 INVYYNEAAGNK PTGSYHGDSDLQLERINVYYNEAAGNKYVP LERINVYYNEAAGNKYVPRAILVDLEPGTM R I N N K Y 2 0 3 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 2 1 0 0 12 0 1354.6517 Q13885 Q13885 47 58 TUBB2A Tubulin beta-2A chain yes yes 2 2.1019E-05 193.3 By MS/MS By matching 7.4 1.5 2 1 1 1 4 1 35218000 35191000 26279 6949 1400 7202 17247;17248;17249;17250;17251 12258;12259 12258 2 401070 80597 INVYYNEAAGNKYVPR PTGSYHGDSDLQLERINVYYNEAAGNKYVP NVYYNEAAGNKYVPRAILVDLEPGTMDSVR R I N P R A 2 1 3 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 3 2 0 0 16 1 1869.9373 Q13885 Q13885 47 62 TUBB2A Tubulin beta-2A chain yes yes 2;3 1.077E-06 179.67 By MS/MS 6.75 0.829 2 1 1 4 37834000 37834000 0 6950 1400 7203 17252;17253;17254;17255 12260;12261 12261 2 311190 0 INVYYNEATGGK PTGTYHGDSDLQLERINVYYNEATGGKYVP LERINVYYNEATGGKYVPRAVLVDLEPGTM R I N G K Y 1 0 2 0 0 0 1 2 0 1 0 1 0 0 0 0 1 0 2 1 0 0 12 0 1327.6408 P68371 P68371 47 58 TUBB4B Tubulin beta-4B chain yes yes 2 9.2781E-17 225.93 By MS/MS By MS/MS 6.75 2.11 1 1 2 1 1 1 1 7 1 405980000 405260000 724140 6951 1187 7204 17256;17257;17258;17259;17260;17261;17262;17263 12262;12263;12264;12265;12266;12267;12268;12269;12270 12265 9 6165200 2220900 INVYYNEATGGKYVPR PTGTYHGDSDLQLERINVYYNEATGGKYVP NVYYNEATGGKYVPRAVLVDLEPGTMDSVR R I N P R A 1 1 2 0 0 0 1 2 0 1 0 1 0 0 1 0 1 0 3 2 0 0 16 1 1842.9264 P68371 P68371 47 62 TUBB4B Tubulin beta-4B chain yes yes 2 3.7162E-28 269.14 By MS/MS 6 0 1 1 10984000 10984000 0 6952 1187 7205 17264 12271 12271 1 85651 0 INVYYNEATGGNYVPR PTGTYHGDSDLQLERINVYYNEATGGNYVP NVYYNEATGGNYVPRAVLVDLEPGTMDSVR R I N P R A 1 1 3 0 0 0 1 2 0 1 0 0 0 0 1 0 1 0 3 2 0 0 16 0 1828.8744 P04350 P04350 47 62 TUBB4A Tubulin beta-4A chain yes yes 2 9.4274E-08 195.1 By MS/MS 6 0 1 1 15653000 15653000 0 6953 451 7206 17265 12272 12272 1 122060 0 INVYYNEATGNK PTGSYHGDSDLQLERINVYYNEATGNKYVP LERINVYYNEATGNKYVPRAILVDLEPGTM R I N N K Y 1 0 3 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 2 1 0 0 12 0 1384.6623 Q9BVA1 Q9BVA1 47 58 TUBB2B Tubulin beta-2B chain yes yes 2 4.8167E-24 243.91 By MS/MS By matching 6.33 0.471 2 1 2 1 45452000 45388000 63653 6954 2375 7207 17266;17267;17268 12273;12274 12273 2 377660 195220 INVYYNESSSQK PAGGYVGDSALQLERINVYYNESSSQKYVP LERINVYYNESSSQKYVPRAALVDLEPGTM R I N Q K Y 0 0 2 0 0 1 1 0 0 1 0 1 0 0 0 3 0 0 2 1 0 0 12 0 1430.6678 Q9BUF5 Q9BUF5 47 58 TUBB6 Tubulin beta-6 chain yes yes 2 6.9212E-24 240.37 By MS/MS By matching 6.75 0.829 2 1 1 3 1 28695000 28664000 31105 6955 2363 7208 17269;17270;17271;17272 12275;12276 12275 2 277360 95398 INYQVDSWEEMLNK WTNFDPLEFLEELKKINYQVDSWEEMLNKA KINYQVDSWEEMLNKAEVGHGYMDRPCLNP K I N N K A 0 0 2 1 0 1 2 0 0 1 1 1 1 0 0 1 0 1 1 1 0 0 14 0 1767.8138 Q13635 Q13635 271 284 PTCH1 Protein patched homolog 1 yes yes 2 0.011566 83.862 By MS/MS 6 0 1 1 2373900 2373900 0 6956 1392 7209 17273 12277 12277 1072 1 18512 0 IPAEANPLADHVSATR ILNSIFPGIGCPVPRIPAEANPLADHVSAT PAEANPLADHVSATRILCGALVFPTIATIV R I P T R I 4 1 1 1 0 0 1 0 1 1 1 0 0 0 2 1 1 0 0 1 0 0 16 0 1660.8533 Q9NX47 Q9NX47 193 208 MARCH5 E3 ubiquitin-protein ligase MARCH5 yes yes 3 0.0078005 84.046 By MS/MS 8.5 0.5 1 1 2 1444200 1444200 0 6957 2679 7210 17274;17275 12278 12278 1 263650 0 IPALDLLIK TCTSVYTKDRAAKCKIPALDLLIKLLQTFR RAAKCKIPALDLLIKLLQTFRSSRLMDEFK K I P I K L 1 0 0 1 0 0 0 0 0 2 3 1 0 0 1 0 0 0 0 0 0 0 9 0 994.64267 P78527 P78527 125 133 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.041651 84.498 By MS/MS 3 1.41 1 1 1 1 1 5 471890 471890 0 6958 1197 7211 17276;17277;17278;17279;17280 12279 12279 1 17523 0 IPAMTIAK EDQKIGIEIIKRTLKIPAMTIAKNAGVEGS IIKRTLKIPAMTIAKNAGVEGSLIVEKIMQ K I P A K N 2 0 0 0 0 0 0 0 0 2 0 1 1 0 1 0 1 0 0 0 0 0 8 0 843.48881 P10809 P10809 474 481 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.021557 104.75 By MS/MS 5.5 0.5 1 1 2 36893000 36893000 0 6959 544 7212 17281;17282 12280 12280 1 300120 0 IPAYFVTVSDPAVPPGEDPDGR IREWCISRQLWWGHRIPAYFVTVSDPAVPP VSDPAVPPGEDPDGRYWVSGRNEAEAREKA R I P G R Y 2 1 0 3 0 0 1 2 0 1 0 0 0 1 5 1 1 0 1 3 0 0 22 0 2298.1168 P26640 P26640 731 752 VARS Valine--tRNA ligase yes yes 2 1.591E-05 115.56 By MS/MS 4 0.816 1 1 1 3 1193600 1193600 0 6960 699 7213 17283;17284;17285 12281 12281 1 32376 0 IPDEFDNDPILVQQLR VYIFGNNPVDENGAKIPDEFDNDPILVQQL PDEFDNDPILVQQLRRTYKYFKDYRQMIIE K I P L R R 0 1 1 3 0 2 1 0 0 2 2 0 0 1 2 0 0 0 0 1 0 0 16 0 1910.9738 Q3ZCQ8 Q3ZCQ8 98 113 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 2.2542E-22 208.51 By MS/MS 8.44 1.07 2 3 2 2 9 46092000 46092000 0 6961 1573 7214 17286;17287;17288;17289;17290;17291;17292;17293;17294 12282;12283;12284;12285;12286;12287;12288;12289;12290;12291 12289 10 1819700 0 IPDEFDNDPILVQQLRR VYIFGNNPVDENGAKIPDEFDNDPILVQQL DEFDNDPILVQQLRRTYKYFKDYRQMIIEP K I P R R T 0 2 1 3 0 2 1 0 0 2 2 0 0 1 2 0 0 0 0 1 0 0 17 1 2067.0749 Q3ZCQ8 Q3ZCQ8 98 114 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 3 0.023133 69.258 By MS/MS 8 0.816 1 1 1 3 12827000 12827000 0 6962 1573 7215 17295;17296;17297 12292 12292 1 610840 0 IPDPEAVKPDDWDEDAPAK DPEDRKPEDWDERPKIPDPEAVKPDDWDED EAVKPDDWDEDAPAKIPDEEATKPEGWLDD K I P A K I 3 0 0 5 0 0 2 0 0 1 0 2 0 0 4 0 0 1 0 1 0 0 19 1 2106.9746 P27824 P27824 293 311 CANX Calnexin yes yes 3 0.019208 61.477 By MS/MS 4 0 1 1 1431900 1431900 0 6963 711 7216 17298 12293 12293 1 39090 0 IPDQLVILDMK YDMFEVCFESKGTGRIPDQLVILDMKHGVE GTGRIPDQLVILDMKHGVEAKNYEEIAKVE R I P M K H 0 0 0 2 0 1 0 0 0 2 2 1 1 0 1 0 0 0 0 1 0 0 11 0 1283.7159 P49755 P49755 117 127 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 3.5029E-05 169.21 By MS/MS 9 0 2 2 1442900 1442900 0 6964 930 7217;7218 17299;17300 12294;12295 12294 694 2 828080 0 IPDSDPSSSK VKAIIYQYMEEIYHRIPDSDPSSSKTRQII EIYHRIPDSDPSSSKTRQIISTIRTQNLPN R I P S K T 0 0 0 2 0 0 0 0 0 1 0 1 0 0 2 4 0 0 0 0 0 0 10 0 1031.4771 P37268 P37268 349 358 FDFT1 Squalene synthase yes yes 2 0.053059 78.264 By MS/MS 7 0 1 1 1968200 1968200 0 6965 814 7219 17301 12296 12296 1 35172 0 IPDVAALSMGFSVK SVVFRNGNWPIPGERIPDVAALSMGFSVKE RIPDVAALSMGFSVKEDLSWPGLAVGNLFH R I P V K E 2 0 0 1 0 0 0 1 0 1 1 1 1 1 1 2 0 0 0 2 0 0 14 0 1433.7588 O75787 O75787 42 55 ATP6AP2 Renin receptor yes yes 2 0.003154 105.65 By MS/MS 8 0 1 1 312540 312540 0 6966 328 7220 17302 12297 12297 185 1 20618 0 IPDWFLNR VERVITIMQNPRQYKIPDWFLNRQKDVKDG QNPRQYKIPDWFLNRQKDVKDGKYSQVLAN K I P N R Q 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 8 0 1059.5502 P62269 P62269 79 86 RPS18 40S ribosomal protein S18 yes yes 2 0.0062162 132.57 By MS/MS 9.5 0.5 1 1 2 2452200 2452200 0 6967 1124 7221 17303;17304 12298;12299 12298 2 1819000 0 IPEDQHALLVK PGRCVPQIIAFLNSKIPEDQHALLVKYQGL LNSKIPEDQHALLVKYQGLVVKQLVSQSKK K I P V K Y 1 0 0 1 0 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1261.703 O94874 O94874 720 730 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.023991 86.344 By MS/MS 5 0 1 1 2052500 2052500 0 6968 354 7222 17305 12300 12300 1 84368 0 IPEFSSFVVR WGSLYRSLLQSSQRRIPEFSSFVVRTNTCG SSQRRIPEFSSFVVRTNTCGELRSSHLGQE R I P V R T 0 1 0 0 0 0 1 0 0 1 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1179.6288 Q6PI48 Q6PI48 41 50 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.0047001 108.43 By MS/MS 6.5 1.12 1 1 1 1 4 4322500 4322500 0 6969 1715 7223 17306;17307;17308;17309 12301 12301 1 170310 0 IPELAINPLGDR DKGENGTLSREDFQRIPELAINPLGDRIIN FQRIPELAINPLGDRIINAFFPEGEDQVNF R I P D R I 1 1 1 1 0 0 1 1 0 2 2 0 0 0 2 0 0 0 0 0 0 0 12 0 1306.7245 Q99653 Q99653 54 65 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.001022 133.07 By MS/MS 9.5 0.5 1 1 2 2818600 2818600 0 6970 2281 7224 17310;17311 12302 12302 1 1648600 0 IPELDFEIPAFSQK DMNREVVKTDSAATRIPELDFEIPAFSQKG RIPELDFEIPAFSQKGALTTVEGLITRAIS R I P Q K G 1 0 0 1 0 1 2 0 0 2 1 1 0 2 2 1 0 0 0 0 0 0 14 0 1632.8399 O75312 O75312 127 140 ZPR1 Zinc finger protein ZPR1 yes yes 2 5.3147E-12 182.41 By MS/MS 6 0 1 1 0 0 0 6971 295 7225 17312 12303 12303 1 0 0 IPFYGSYTEMDPVIIASEGVEK AGAFDQLKQNATKARIPFYGSYTEMDPVII TEMDPVIIASEGVEKFKNENFEIIIVDTSG R I P E K F 1 0 0 1 0 0 3 2 0 3 0 1 1 1 2 2 1 0 2 2 0 0 22 0 2444.1821 P61011 P61011 157 178 SRP54 Signal recognition particle 54 kDa protein yes yes 2 9.7343E-14 164.15 By MS/MS 6 0 2 2 1846000 1846000 0 6972 1082 7226;7227 17313;17314 12304;12305 12305 853 2 14395 0 IPGFCENEK ACVMLIPGMEEQLNKIPGFCENEKGVVPCN EEQLNKIPGFCENEKGVVPCNILVGYKAVY K I P E K G 0 0 1 0 1 0 2 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 9 0 1092.491 Q9NRX5 Q9NRX5 68 76 SERINC1 Serine incorporator 1 yes yes 2 0.030852 90.601 By MS/MS 1 0 1 1 279410 279410 0 6973 2616 7228 17315 12306 12306 1 13652 0 IPGGIIEDSCVLR GRKEIDIKKYARVEKIPGGIIEDSCVLRGV EKIPGGIIEDSCVLRGVMINKDVTHPRMRR K I P L R G 0 1 0 1 1 0 1 2 0 3 1 0 0 0 1 1 0 0 0 1 0 0 13 0 1427.7442 P49368 P49368 204 216 CCT3 T-complex protein 1 subunit gamma yes yes 2 4.3726E-05 160.77 By MS/MS 5 2.31 1 1 1 1 2 2 1 9 222790000 222790000 0 6974 916 7229 17316;17317;17318;17319;17320;17321;17322;17323;17324 12307;12308;12309;12310;12311;12312;12313;12314 12311 8 2250200 0 IPGLLGVFQK LERGSNTIASAAADKIPGLLGVFQKLIASK AAADKIPGLLGVFQKLIASKANDHQGFYLL K I P Q K L 0 0 0 0 0 1 0 2 0 1 2 1 0 1 1 0 0 0 0 1 0 0 10 0 1070.6488 P55060 P55060 727 736 CSE1L Exportin-2 yes yes 2 0.0010512 120.49 By MS/MS 4.5 0.5 1 1 2 277440 277440 0 6975 1025 7230 17325;17326 12315 12315 1 7916.6 0 IPIPELEAR ICEDIGRQMLCYNRRIPIPELEARIDAVNA LCYNRRIPIPELEARIDAVNAETIREVCTK R I P A R I 1 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 9 0 1036.5917 O75439 O75439 433 441 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.0088605 107.29 By MS/MS 7 0 1 1 2981100 2981100 0 6976 311 7231 17327 12316 12316 1 53274 0 IPKEQGVLSFWR TADKQYKGIIDCVVRIPKEQGVLSFWRGNL VVRIPKEQGVLSFWRGNLANVIRYFPTQAL R I P W R G 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 1 0 1 0 1 0 0 12 1 1458.7983 P05141;P12236 P05141 61 72 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 3 0.0081861 88.163 By MS/MS 7.5 0.5 1 1 2 1295600 1295600 0 6977 469;563 7232 17328;17329 12317 12317 1 83756 0 IPLAEWESR VCEDIGRSLLTYGRRIPLAEWESRIAEVDA LTYGRRIPLAEWESRIAEVDASVVREICSK R I P S R I 1 1 0 0 0 0 2 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 9 0 1099.5662 P31930 P31930 424 432 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 0.0086346 107.57 By MS/MS 7 0 1 1 701680 701680 0 6978 756 7233 17330 12318 12318 1 12539 0 IPLENLQIIR EVAGYVLIALNTVERIPLENLQIIRGNMYY NTVERIPLENLQIIRGNMYYENSYALAVLS R I P I R G 0 1 1 0 0 1 1 0 0 3 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1207.7289 P00533 P00533 99 108 EGFR Epidermal growth factor receptor yes yes 2 0.013813 96.665 By MS/MS 3 0 1 1 269690 269690 0 6979 431 7234 17331 12319 12319 1 7040.2 0 IPLKDVVPR LLWEIYSFGRVPYPRIPLKDVVPRVEKGYK RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP R I P P R V 0 1 0 1 0 0 0 0 0 1 1 1 0 0 2 0 0 0 0 2 0 0 9 1 1035.6441 P41240 P41240 390 398 CSK Tyrosine-protein kinase CSK yes yes 3 0.05075 68.846 By MS/MS 7 0 1 1 637220 637220 0 6980 839 7235 17332 12320 12320 1 11387 0 IPLLIGGATTSK EMIFVAKEMERLAIRIPLLIGGATTSKTHT AIRIPLLIGGATTSKTHTAVKIAPRYSAPV R I P S K T 1 0 0 0 0 0 0 2 0 2 2 1 0 0 1 1 2 0 0 0 0 0 12 0 1169.702 Q99707 Q99707 854 865 MTR Methionine synthase yes yes 2 0.00028728 148.56 By MS/MS 4 0.816 1 1 1 3 1591300 1591300 0 6981 2284 7236 17333;17334;17335 12321 12321 1 42967 0 IPLNDLFR EDKGILTVDELLAIRIPLNDLFRCNSLSTL DELLAIRIPLNDLFRCNSLSTLEKNDVVQH R I P F R C 0 1 1 1 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 8 0 986.55492 P13473 P13473 145 152 LAMP2 Lysosome-associated membrane glycoprotein 2 yes yes 2 0.010322 119.27 By MS/MS 4 0.816 1 1 1 3 1479000 1479000 0 6982 573 7237 17336;17337;17338 12322;12323 12323 2 42395 0 IPNPDFFEDLEPFR MIDNPSYQGIWKPRKIPNPDFFEDLEPFRM KIPNPDFFEDLEPFRMTPFSAIGLELWSMT K I P F R M 0 1 1 2 0 0 2 0 0 1 1 0 0 3 3 0 0 0 0 0 0 0 14 0 1734.8253 P27824 P27824 402 415 CANX Calnexin yes yes 2 0.047609 75.479 By MS/MS 4 0 1 1 56337 56337 0 6983 711 7238 17339 12324 12324 1 1537.9 0 IPQAIAQLSK DWETKNFDFEDVFVKIPQAIAQLSKEAGVE DVFVKIPQAIAQLSKEAGVEKFIHVSHLNA K I P S K E 2 0 0 0 0 2 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 10 0 1067.6339 Q16795 Q16795 148 157 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.0039355 118.03 By MS/MS 7.5 0.5 1 1 2 2710800 2710800 0 6984 1548 7239 17340;17341 12325 12325 1 162670 0 IPQLLLER VVVISGDTGCGKTTRIPQLLLERYVTEGRG GCGKTTRIPQLLLERYVTEGRGARCNVIIT R I P E R Y 0 1 0 0 0 1 1 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 8 0 980.60187 Q7L2E3 Q7L2E3 467 474 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0052244 136.27 By MS/MS By matching 3.71 1.48 1 2 2 1 1 5 2 17220000 17132000 87743 6985 1763 7240 17342;17343;17344;17345;17346;17347;17348 12326;12327;12328;12329 12327 4 459370 140490 IPSAVGYQPTLATDMGTMQER RFTQAGSEVSALLGRIPSAVGYQPTLATDM YQPTLATDMGTMQERITTTKKGSITSVQAI R I P E R I 2 1 0 1 0 2 1 2 0 1 1 0 2 0 2 1 3 0 1 1 0 0 21 0 2265.077 P06576 P06576 325 345 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 7.5295E-09 173.19 By MS/MS By MS/MS 6.75 0.829 6 3 3 11 1 43412000 43263000 149210 6986 478 7241;7242;7243 17349;17350;17351;17352;17353;17354;17355;17356;17357;17358;17359;17360 12330;12331;12332;12333;12334;12335;12336;12337 12334 269;270 8 554020 457620 IPSEQEQLR QPLIQDRCFLSWLVKIPSEQEQLRARQITA LSWLVKIPSEQEQLRARQITAQQINKLEEL K I P L R A 0 1 0 0 0 2 2 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1098.5669 Q92900 Q92900 245 253 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0091407 106.68 By MS/MS 3.5 0.5 1 1 2 2169200 2169200 0 6987 2088 7244 17361;17362 12338 12338 1 57003 0 IPSWQIPVK LLNRRQFPPSPSAPKIPSWQIPVKSPSPSS SPSAPKIPSWQIPVKSPSPSSPAAVNHHSS K I P V K S 0 0 0 0 0 1 0 0 0 2 0 1 0 0 2 1 0 1 0 1 0 0 9 0 1066.6175 O75381 O75381 238 246 PEX14 Peroxisomal membrane protein PEX14 yes yes 2 0.0021901 115.71 By MS/MS 6 0 1 1 2355300 2355300 0 6988 301 7245 17363 12339 12339 1 18367 0 IPTEAPQLELK LEKCQRENGFIYFQKIPTEAPQLELKANYG YFQKIPTEAPQLELKANYGLVEPIPFEFPP K I P L K A 1 0 0 0 0 1 2 0 0 1 2 1 0 0 2 0 1 0 0 0 0 0 11 0 1237.6918 Q5VW32 Q5VW32 335 345 BROX BRO1 domain-containing protein BROX yes yes 2 6.8047E-05 166.66 By MS/MS 7 0 1 1 3070800 3070800 0 6989 1653 7246 17364 12340 12340 1 54876 0 IPVALQR GLTVRSPDEPLPVVRIPVALQRQLEQRQSR DEPLPVVRIPVALQRQLEQRQSRRRNLPRP R I P Q R Q 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 7 0 795.49667 Q9NUL7 Q9NUL7 38 44 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.036395 110.54 By MS/MS By matching 6 0 2 1 1 4769600 4742400 27219 6990 2638 7247 17365;17366 12341 12341 1 36982 83478 IPVDTYNNILTVLK ATSSAVSKELTRLLKIPVDTYNNILTVLKL KIPVDTYNNILTVLKLKHFHPLFEYFDYES K I P L K L 0 0 2 1 0 0 0 0 0 2 2 1 0 0 1 0 2 0 1 2 0 0 14 0 1601.9029 Q96QK1 Q96QK1 404 417 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 8.8839E-08 178.1 By MS/MS 5.5 0.5 1 1 2 2145700 2145700 0 6991 2242 7248 17367;17368 12342;12343 12343 2 22692 0 IPVENILGEVGDGFK IRGSNTCEVHFENTKIPVENILGEVGDGFK IPVENILGEVGDGFKVAMNILNSGRFSMGS K I P F K V 0 0 1 1 0 0 2 3 0 2 1 1 0 1 1 0 0 0 0 2 0 0 15 0 1585.8352 Q9H845 Q9H845 280 294 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2;3 8.2015E-06 150.12 By MS/MS 6 0 2 2 4835300 4835300 0 6992 2521 7249 17369;17370 12344;12345 12344 2 37706 0 IPVFCIDVER FFEDPSSERKEKKERIPVFCIDVERNDRRA EKKERIPVFCIDVERNDRRAVGHEPEHWSV R I P E R N 0 1 0 1 1 0 1 0 0 2 0 0 0 1 1 0 0 0 0 2 0 0 10 0 1246.638 Q9Y5W7 Q9Y5W7 589 598 SNX14 Sorting nexin-14 yes yes 2 0.011837 94.309 By MS/MS 4 0 1 1 292270 292270 0 6993 2983 7250 17371 12346 12346 1 7978.7 0 IPVGPETLGR LVRGQKVLDSGAPIKIPVGPETLGRIMNVI GAPIKIPVGPETLGRIMNVIGEPIDERGPI K I P G R I 0 1 0 0 0 0 1 2 0 1 1 0 0 0 2 0 1 0 0 1 0 0 10 0 1037.5869 P06576 P06576 134 143 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.0069229 101.46 By MS/MS By matching 6.75 0.829 2 1 1 3 1 6335800 6288200 47566 6994 478 7251 17372;17373;17374;17375 12347 12347 1 78291 145880 IPVPQQVAR VVQMAVLINNKACGKIPVPQQVARDQDKVH NKACGKIPVPQQVARDQDKVHEFVLQSELG K I P A R D 1 1 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 0 0 2 0 0 9 0 1006.5924 Q15031 Q15031 853 861 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.020962 96.19 By MS/MS 7 2 1 1 1 1 1 1 1 7 14141000 14141000 0 6995 1467 7252 17376;17377;17378;17379;17380;17381;17382 12348 12348 1 457440 0 IPWTAASSQLK ALRRSINQPVAFVRRIPWTAASSQLKEHFA FVRRIPWTAASSQLKEHFAQFGHVRRCILP R I P L K E 2 0 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 1 0 0 0 0 11 0 1200.6503 Q9GZT3 Q9GZT3 26 36 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.0066513 101.38 By MS/MS 9.5 0.5 1 1 2 6018600 6018600 0 6996 2443 7253 17383;17384 12349 12349 1 6367300 0 IPYFPANQEMLQK GEVKVGVSYKLNGKRIPYFPANQEMLQKVE KRIPYFPANQEMLQKVEVEYETLPGWKADT R I P Q K V 1 0 1 0 0 2 1 0 0 1 1 1 1 1 2 0 0 0 1 0 0 0 13 0 1577.7912 Q8N142 Q8N142 386 398 ADSSL1 Adenylosuccinate synthetase isozyme 1 yes yes 2 0.01731 80.688 By MS/MS 4 0 2 2 1896500 1896500 0 6997 1894 7254 17385;17386 12350 12350 1290 1 51772 0 IQAEVEAQLAR QEEEERKKREDDEKRIQAEVEAQLARQKEE DEKRIQAEVEAQLARQKEEESQQQAVLEQE R I Q A R Q 3 1 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1226.6619 Q9UM54 Q9UM54 981 991 MYO6 Unconventional myosin-VI yes yes 2 0.0044415 110.08 By MS/MS 3 0 1 1 625480 625480 0 6998 2833 7255 17387 12351 12351 1 16328 0 IQAGDPVAR ELLARYKLRENQLPRIQAGDPVARYFGIKR ENQLPRIQAGDPVARYFGIKRGQVVKIIRP R I Q A R Y 2 1 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 925.49813 P19388 P19388 173 181 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 2 0.038753 86.136 By MS/MS 9 0.816 1 1 1 3 3764500 3764500 0 6999 632 7256 17388;17389;17390 12352;12353 12353 2 424960 0 IQALAEETAQNLKR QQSDGDRDLQEHRQRIQALAEETAQNLKRN RIQALAEETAQNLKRNVYQNYRQFIETARE R I Q K R N 3 1 1 0 0 2 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 14 1 1583.8631 Q8IYI6 Q8IYI6 48 61 EXOC8 Exocyst complex component 8 yes yes 3 0.040028 63.76 By MS/MS 5 0 1 1 1429600 1429600 0 7000 1881 7257 17391 12354 12354 1 58762 0 IQALESNLENLLTR QNMDLLEKLQVAHTKIQALESNLENLLTRE KIQALESNLENLLTRETKMKSLIRTLEQEK K I Q T R E 1 1 2 0 0 1 2 0 0 1 4 0 0 0 0 1 1 0 0 0 0 0 14 0 1612.8784 O60343 O60343 1227 1240 TBC1D4 TBC1 domain family member 4 yes yes 2 1.2616E-05 166.24 By MS/MS 3 0 1 1 254780 254780 0 7001 246 7258 17392 12355 12355 1 6650.9 0 IQALGLGEDWNVEK GFRRFKRSAQFFNYKIQALGLGEDWNVEKG KIQALGLGEDWNVEKGTSAGGGQKVRLLKK K I Q E K G 1 0 1 1 0 1 2 2 0 1 2 1 0 0 0 0 0 1 0 1 0 0 14 0 1570.7991 Q02809 Q02809 55 68 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.00010093 147.96 By MS/MS 5 0 1 1 800970 800970 0 7002 1256 7259 17393 12356 12356 1 32923 0 IQAVIDSGVCR ACWALSYLSDGPNEKIQAVIDSGVCRRLVE PNEKIQAVIDSGVCRRLVELLMHNDYKVAS K I Q C R R 1 1 0 1 1 1 0 1 0 2 0 0 0 0 0 1 0 0 0 2 0 0 11 0 1216.6234 O60684;O15131 O60684 287 297 KPNA6;KPNA5 Importin subunit alpha-7;Importin subunit alpha-6 yes no 2 0.00042027 145.99 By MS/MS 6.5 0.5 1 1 2 7484300 7484300 0 7003 258 7260 17394;17395 12357 12357 1 79918 0 IQAYDYLECSAK QEPVRTDDGRAMAVRIQAYDYLECSAKTKE AVRIQAYDYLECSAKTKEGVREVFETATRA R I Q A K T 2 0 0 1 1 1 1 0 0 1 1 1 0 0 0 1 0 0 2 0 0 0 12 0 1459.6653 P62745 P62745 151 162 RHOB Rho-related GTP-binding protein RhoB yes yes 2 0.01017 96.82 By MS/MS 9 0 1 1 806730 806730 0 7004 1141 7261 17396 12358 12358 1 462990 0 IQCFCFEEQR TYNIVPFEAGQYFNKIQCFCFEEQRLNPQE QYFNKIQCFCFEEQRLNPQEEVDMPVFFYI K I Q Q R L 0 1 0 0 2 2 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 10 0 1415.5962 Q9Y6N1 Q9Y6N1 215 224 COX11 Cytochrome c oxidase assembly protein COX11, mitochondrial yes yes 2 2.9572E-21 233.57 By MS/MS 9.5 0.5 1 1 2 1261000 1261000 0 7005 3011 7262 17397;17398 12359 12359 1 748530 0 IQDAGPASR YKSTSSGHREISSPRIQDAGPASRDVQATG EISSPRIQDAGPASRDVQATGRIADDADPR R I Q S R D 2 1 0 1 0 1 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 9 0 913.46174 Q7Z2W4 Q7Z2W4 462 470 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.025427 93.667 By MS/MS 5 0.816 1 1 1 3 2844500 2844500 0 7006 1777 7263 17399;17400;17401 12360 12360 1 78086 0 IQDGLGELKK DKNEDLGRMYNLVSRIQDGLGELKKLLETH NLVSRIQDGLGELKKLLETHIHNQGLAAIE R I Q K K L 0 0 0 1 0 1 1 2 0 1 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1099.6237 Q13616 Q13616 329 338 CUL1 Cullin-1 yes yes 3 0.034576 89.9 By MS/MS 4.5 0.5 1 1 2 1662500 1662500 0 7007 1387 7264 17402;17403 12361 12361 1 58707 0 IQDKEGIPPDQQR LEVEPSDTIENVKAKIQDKEGIPPDQQRLI AKIQDKEGIPPDQQRLIFAGKQLEDGRTLS K I Q Q R L 0 1 0 2 0 3 1 1 0 2 0 1 0 0 2 0 0 0 0 0 0 0 13 1 1522.774 P62979;P0CG47;P0CG48 P62979 30 42 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 2;3 0.0019792 162.31 By MS/MS By matching 5.19 2.8 3 3 2 3 4 2 2 3 2 2 20 6 29174000 28984000 190010 7008 1165 7265 17404;17405;17406;17407;17408;17409;17410;17411;17412;17413;17414;17415;17416;17417;17418;17419;17420;17421;17422;17423;17424;17425;17426;17427;17428;17429 12362;12363;12364;12365;12366;12367;12368;12369;12370;12371 12371 10 2127900 496260 IQDLEQLAK LNTKVKEKFQQLRHRIQDLEQLAKEQDKES QQLRHRIQDLEQLAKEQDKESEKQLLLQEV R I Q A K E 1 0 0 1 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1056.5815 Q12981 Q12981 58 66 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.00095928 143.04 By MS/MS 8.5 0.5 1 1 2 3114800 3114800 0 7009 1321 7266 17430;17431 12372;12373 12372 2 525040 0 IQDLIPVLLR TQGPYDFGSGETARRIQDLIPVLLRHRLCP ETARRIQDLIPVLLRHRLCPPPEETYALHR R I Q L R H 0 1 0 1 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1178.7387 Q96D53 Q96D53 466 475 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.00048742 145.46 By MS/MS 6 0 1 1 2630800 2630800 0 7010 2147 7267 17432 12374 12374 1 20515 0 IQDWYDKK KVQALEEANNDLENKIQDWYDKKGPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT K I Q K K G 0 0 0 2 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 8 1 1094.5397 P35527;CON__P35527 P35527 185 192 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.051049 80.455 By matching By MS/MS 4 1.22 1 1 2 1 3 1516100 99263 1416800 + 7011 791 7268 17433;17434;17435;17436 12375 12375 1 4080.1 1503900 IQEAGTEVVK KVDFPQDQLTALTGRIQEAGTEVVKAKAGA ALTGRIQEAGTEVVKAKAGAGSATLSMAYA R I Q V K A 1 0 0 0 0 1 2 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 10 0 1072.5764 P40926 P40926 230 239 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.00099461 123.11 By MS/MS 8.5 1.12 1 1 1 1 4 15058000 15058000 0 7012 832 7269 17437;17438;17439;17440 12376 12376 1 1255800 0 IQEAGTEVVKAK KVDFPQDQLTALTGRIQEAGTEVVKAKAGA TGRIQEAGTEVVKAKAGAGSATLSMAYAGA R I Q A K A 2 0 0 0 0 1 2 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 12 1 1271.7085 P40926 P40926 230 241 MDH2 Malate dehydrogenase, mitochondrial yes yes 2;3 0.00046709 163.12 By MS/MS 8.33 0.471 2 1 3 3003600 3003600 0 7013 832 7270 17441;17442;17443 12377;12378 12378 2 222610 0 IQEDYNDKYWDQR YSEFMVEEHELRKERIQEDYNDKYWDQRYT ERIQEDYNDKYWDQRYTIVQQQIPSFLQKM R I Q Q R Y 0 1 1 3 0 2 1 0 0 1 0 1 0 0 0 0 0 1 2 0 0 0 13 1 1771.7802 Q9BSJ2 Q9BSJ2 419 431 TUBGCP2 Gamma-tubulin complex component 2 yes yes 3 0.02785 68.277 By MS/MS 4 0 1 1 1483900 1483900 0 7014 2338 7271 17444 12379 12379 1 40508 0 IQEEGTEVELTGK LKRQEFEMKIEVEAKIQEEGTEVELTGKGA AKIQEEGTEVELTGKGATEITTTITKLSFV K I Q G K G 0 0 0 0 0 1 4 2 0 1 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1431.7093 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 326 338 yes yes 2 4.7308E-05 148.13 By MS/MS 1.5 0.5 1 1 2 225510 225510 0 + 7015 30 7272 17445;17446 12380;12381 12381 2 11018 0 IQEENVIPR KINGDWQRADAVWNKIQEENVIPREKTLRL DAVWNKIQEENVIPREKTLRLLAEILREGN K I Q P R E 0 1 1 0 0 1 2 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 9 0 1096.5877 P42704 P42704 981 989 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 5.7373E-05 173.39 By MS/MS By MS/MS 3.43 1.59 1 1 2 1 1 1 6 1 89339000 89008000 330940 7016 854 7273 17447;17448;17449;17450;17451;17452;17453 12382;12383;12384;12385;12386;12387;12388 12386 7 2323000 474300 IQEENVIPREK KINGDWQRADAVWNKIQEENVIPREKTLRL VWNKIQEENVIPREKTLRLLAEILREGNQE K I Q E K T 0 1 1 0 0 1 3 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 11 1 1353.7252 P42704 P42704 981 991 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.03171 106.62 By MS/MS 3 0 1 1 395170 395170 0 7017 854 7274 17454 12389 12389 0 10316 0 IQEGVFDINNEANGIK VEEAFINTAKEIYEKIQEGVFDINNEANGI QEGVFDINNEANGIKIGPQHAATNATHAGN K I Q I K I 1 0 3 1 0 1 2 2 0 3 0 1 0 1 0 0 0 0 0 1 0 0 16 0 1759.8741 P61019 P61019 171 186 RAB2A Ras-related protein Rab-2A yes yes 2 1.063E-14 203.85 By MS/MS 9 0 1 1 601260 601260 0 7018 1083 7275 17455 12390 12390 1 345070 0 IQEIIEQLDVTTSEYEK MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY EIIEQLDVTTSEYEKEKLNERLAKLSDGVA R I Q E K E 0 0 0 1 0 2 4 0 0 3 1 1 0 0 0 1 2 0 1 1 0 0 17 0 2037.0154 P10809 P10809 371 387 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.1058E-43 260.29 By MS/MS By matching 6 0 3 2 1 15413000 15395000 18233 7019 544 7276 17456;17457;17458 12391;12392 12391 2 120050 55919 IQEIIEQLDVTTSEYEKEK MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY IEQLDVTTSEYEKEKLNERLAKLSDGVAVL R I Q E K L 0 0 0 1 0 2 5 0 0 3 1 2 0 0 0 1 2 0 1 1 0 0 19 1 2294.1529 P10809 P10809 371 389 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 1.7345E-25 267.5 By MS/MS 6 0 2 2 176440000 176440000 0 7020 544 7277 17459;17460 12393;12394 12394 2 1375900 0 IQEIIEQLDVTTSEYEKEKLNER MLLKGKGDKAQIEKRIQEIIEQLDVTTSEY DVTTSEYEKEKLNERLAKLSDGVAVLKVGG R I Q E R L 0 1 1 1 0 2 6 0 0 3 2 2 0 0 0 1 2 0 1 1 0 0 23 2 2806.4236 P10809 P10809 371 393 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3;4 7.8247E-05 96.633 By MS/MS 6 0 2 2 158470000 158470000 0 7021 544 7278 17461;17462 12395;12396 12395 2 1235800 0 IQELAHELAAAK TLASVQELLIQQQQKIQELAHELAAAKATT QQKIQELAHELAAAKATTSTNWILESQNIN K I Q A K A 4 0 0 0 0 1 2 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 12 0 1292.7089 O75381 O75381 184 195 PEX14 Peroxisomal membrane protein PEX14 yes yes 2 0.00018128 153.54 By MS/MS 6.5 0.5 1 1 2 6457200 6457200 0 7022 301 7279 17463;17464 12397 12397 1 55820 0 IQELEDLLAK QLSNLQKESRACLERIQELEDLLAKEKDNS ACLERIQELEDLLAKEKDNSRRMLTDKERE R I Q A K E 1 0 0 1 0 1 2 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1170.6496 P20700 P20700 321 330 LMNB1 Lamin-B1 yes yes 2 0.0033538 112.83 By MS/MS 5 0 1 1 632770 632770 0 7023 645 7280 17465 12398 12398 1 26010 0 IQELENLPGSLAGDLR LQEREYRLQARIAHRIQELENLPGSLAGDL QELENLPGSLAGDLRTKATIELKALRLLNF R I Q L R T 1 1 1 1 0 1 2 2 0 1 4 0 0 0 1 1 0 0 0 0 0 0 16 0 1723.9105 P51532 P51532 382 397 SMARCA4 Transcription activator BRG1 yes yes 2 0.0015098 117.07 By MS/MS 2.5 0.5 1 1 2 263180 263180 0 7024 965 7281 17466;17467 12399 12399 1 9707.8 0 IQESHPELR SSMSVTSLEAELQAKIQESHPELRRVYFNK AELQAKIQESHPELRRVYFNKGL_______ K I Q L R R 0 1 0 0 0 1 2 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1107.5673 Q9H9B4 Q9H9B4 306 314 SFXN1 Sideroflexin-1 yes yes 2 0.00159 134.23 By MS/MS By matching 8 0 3 2 1 13380000 13340000 39679 7025 2533 7282 17468;17469;17470 12400;12401;12402 12400 3 880070 338510 IQESHPELRR SSMSVTSLEAELQAKIQESHPELRRVYFNK ELQAKIQESHPELRRVYFNKGL________ K I Q R R V 0 2 0 0 0 1 2 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 10 1 1263.6684 Q9H9B4 Q9H9B4 306 315 SFXN1 Sideroflexin-1 yes yes 2;3;4 0.0028918 120.99 By MS/MS By matching 8.44 0.831 1 4 3 1 8 1 45264000 45214000 49829 7026 2533 7283 17471;17472;17473;17474;17475;17476;17477;17478;17479 12403;12404;12405 12403 3 3384800 425100 IQESYGDVYGICTK LRALMELRSTDALRKIQESYGDVYGICTKL KIQESYGDVYGICTKLKTSPNEGLSGNPAD K I Q T K L 0 0 0 1 1 1 1 2 0 2 0 1 0 0 0 1 1 0 2 1 0 0 14 0 1631.7501 P20020 P20020 49 62 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 2 0.00011171 146.59 By MS/MS 2 1 1 1 2 798560 798560 0 7027 637 7284 17480;17481 12406;12407 12407 2 26420 0 IQETQAELPR LDTNKSRFVDFQKVRIQETQAELPRGSIPR FQKVRIQETQAELPRGSIPRSLEVILRAEA R I Q P R G 1 1 0 0 0 2 2 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1183.6197 Q14566 Q14566 208 217 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.00017274 157.78 By MS/MS 4.67 0.471 1 2 3 11783000 11783000 0 7028 1436 7285 17482;17483;17484 12408;12409 12408 2 360890 0 IQEVADELQK TQGLIFVVDSNDRERIQEVADELQKMLLVD NDRERIQEVADELQKMLLVDELRDAVLLLF R I Q Q K M 1 0 0 1 0 2 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1171.6085 P18085 P18085 100 109 ARF4 ADP-ribosylation factor 4 yes yes 2 2.1486E-10 197.79 By MS/MS 9.5 0.5 1 1 2 30997000 30997000 0 7029 621 7286 17485;17486 12410;12411 12411 2 21402000 0 IQEVGEPSKEEK ______________________________ KKRIQEVGEPSKEEKAVAKYLRFNCPTKST R I Q E K A 0 0 0 0 0 1 4 1 0 1 0 2 0 0 1 1 0 0 0 1 0 0 12 1 1371.6882 Q99442 Q99442 11 22 SEC62 Translocation protein SEC62 yes yes 2;3 0.02211 108.31 By MS/MS 6.33 0.471 2 1 3 8109700 8109700 0 7030 2266 7287 17487;17488;17489 12412;12413 12412 1 64112 0 IQEYLQSSGLAQR LQSSMAQLPMEELNRIQEYLQSSGLAQRHQ NRIQEYLQSSGLAQRHQRLYSLLDRFRLST R I Q Q R H 1 1 0 0 0 3 1 1 0 1 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1491.7682 P42858 P42858 2039 2051 HTT Huntingtin yes yes 2 1.2378E-25 246.56 By MS/MS 1.5 0.5 1 1 2 728610 728610 0 7031 858 7288 17490;17491 12414;12415 12414 2 35771 0 IQFDEGYDNYPGQEK ARSATARVRSRPELRIQFDEGYDNYPGQEK IQFDEGYDNYPGQEKTDDLKKRKNIFTGKR R I Q E K T 0 0 1 2 0 2 2 2 0 1 0 1 0 1 1 0 0 0 2 0 0 0 15 0 1801.7795 Q92665 Q92665 226 240 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 3.488E-14 198.37 By MS/MS By matching 7.33 0.471 2 1 2 1 7722700 7704900 17823 7032 2073 7289 17492;17493;17494 12416 12416 1 158030 73165 IQFDEGYDNYPGQEKTDDLKK ARSATARVRSRPELRIQFDEGYDNYPGQEK YDNYPGQEKTDDLKKRKNIFTGKRLNIFDM R I Q K K R 0 0 1 4 0 2 2 2 0 1 1 3 0 1 1 0 1 0 2 0 0 0 21 2 2502.1551 Q92665 Q92665 226 246 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 4 0.045239 44.641 By MS/MS 7.5 0.5 1 1 2 2250900 2250900 0 7033 2073 7290 17495;17496 12417 12417 1 53528 0 IQFVGACNPPTDPGR GFYRTSDQTWVKLERIQFVGACNPPTDPGR IQFVGACNPPTDPGRKPLSHRFLRHVPVVY R I Q G R K 1 1 1 1 1 1 0 2 0 1 0 0 0 1 3 0 1 0 0 1 0 0 15 0 1627.7777 Q14204 Q14204 2706 2720 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.6289E-14 202.32 By MS/MS By matching 1.75 0.829 2 1 1 3 1 4167400 4125100 42345 7034 1421 7291 17497;17498;17499;17500 12418;12419 12418 2 195900 42345 IQGLTVEQAEAVVR LRGNEIVLSAGSTPRIQGLTVEQAEAVVRL RIQGLTVEQAEAVVRLSCLPAFKDLIAKVQ R I Q V R L 2 1 0 0 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 3 0 0 14 0 1511.8308 Q14204 Q14204 3924 3937 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.8078E-35 265.75 By MS/MS By matching 1.75 0.829 2 1 1 3 1 4088400 4052800 35609 7035 1421 7292 17501;17502;17503;17504 12420;12421 12420 2 173240 35609 IQGPQPVPGEIK IASVINIPFDVAKSRIQGPQPVPGEIKYRT KSRIQGPQPVPGEIKYRTCFKTMATVYQEE R I Q I K Y 0 0 0 0 0 2 1 2 0 2 0 1 0 0 3 0 0 0 0 1 0 0 12 0 1261.703 Q9BQT8 Q9BQT8 235 246 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 8.0549E-05 159.34 By MS/MS 8 0 1 1 3210800 3210800 0 7036 2319 7293 17505 12422 12422 1 211810 0 IQGSTIPINQAR MSVQTFRYFAGWCDKIQGSTIPINQARPNR CDKIQGSTIPINQARPNRNLTFTKKEPLGV K I Q A R P 1 1 1 0 0 2 0 1 0 3 0 0 0 0 1 1 1 0 0 0 0 0 12 0 1296.715 Q3SY69;O75891 Q3SY69 561 572 ALDH1L2;ALDH1L1 Mitochondrial 10-formyltetrahydrofolate dehydrogenase;Cytosolic 10-formyltetrahydrofolate dehydrogenase no no 2 2.0107E-06 176.48 By MS/MS 4.5 0.5 1 1 2 1298400 1298400 0 7037 1570;336 7294 17506;17507 12423 12423 1 37755 0 IQGSTIPINQARPNR MSVQTFRYFAGWCDKIQGSTIPINQARPNR IQGSTIPINQARPNRNLTFTKKEPLGVCAI K I Q N R N 1 2 2 0 0 2 0 1 0 3 0 0 0 0 2 1 1 0 0 0 0 0 15 1 1663.9118 Q3SY69;O75891 Q3SY69 561 575 ALDH1L2;ALDH1L1 Mitochondrial 10-formyltetrahydrofolate dehydrogenase;Cytosolic 10-formyltetrahydrofolate dehydrogenase no no 3 0.038669 60.157 By MS/MS 4 0 1 1 2201700 2201700 0 7038 1570;336 7295 17508 12424 12424 1 60103 0 IQHYAGK SRFLNDTSLPHSCFRIQHYAGKVLYQVEGF SLPHSCFRIQHYAGKVLYQVEGFVDKNNDL R I Q G K V 1 0 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 815.42899 O43795 O43795 512 518 MYO1B Unconventional myosin-Ib yes yes 2 0.052052 100.74 By MS/MS 3.5 0.5 1 1 2 1054200 1054200 0 7039 223 7296 17509;17510 12425 12425 1 28332 0 IQIEAIPLALQGR LCEACDQLGWTKPTKIQIEAIPLALQGRDI TKIQIEAIPLALQGRDIIGLAETGSGKTGA K I Q G R D 2 1 0 0 0 2 1 1 0 3 2 0 0 0 1 0 0 0 0 0 0 0 13 0 1420.8402 Q9H0S4 Q9H0S4 50 62 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 2 0.00030499 142.89 By MS/MS 6 0 1 1 2134400 2134400 0 7040 2457 7297 17511 12426 12426 1 16644 0 IQIVGLTELQSLAVGPR FCNSKPHDELLQNNRIQIVGLTELQSLAVG IVGLTELQSLAVGPRVFQYGVKVVLQAMYL R I Q P R V 1 1 0 0 0 2 1 2 0 2 3 0 0 0 1 1 1 0 0 2 0 0 17 0 1793.0411 Q9BT22 Q9BT22 83 99 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 2.4995E-18 198.81 By MS/MS 6 0 1 1 370820 370820 0 7041 2344 7298 17512 12427 12427 1 2891.7 0 IQKDINELNLPK GTKGSSKKASAAQLRIQKDINELNLPKTCD QLRIQKDINELNLPKTCDISFSDPDDLLNF R I Q P K T 0 0 2 1 0 1 1 0 0 2 2 2 0 0 1 0 0 0 0 0 0 0 12 1 1423.8035 P61081 P61081 34 45 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 3 0.0043208 94.402 By MS/MS 9.5 0.5 1 1 2 1340300 1340300 0 7042 1086 7299 17513;17514 12428 12428 1 858870 0 IQLEQVQEWK RAEDKAKLKELEKHKIQLEQVQEWKSKMQE LEKHKIQLEQVQEWKSKMQEQQADLQRRLK K I Q W K S 0 0 0 0 0 3 2 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1299.6823 Q14203 Q14203 253 262 DCTN1 Dynactin subunit 1 yes yes 2 7.894E-12 213.8 By MS/MS 3.5 0.5 1 1 2 1546200 1546200 0 7043 1420 7300 17515;17516 12429 12429 1 40499 0 IQLLVFK AKLAGFLDLTEQEFRIQLLVFKHKMKNLVW DLTEQEFRIQLLVFKHKMKNLVWTSGISAL R I Q F K H 0 0 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 0 0 1 0 0 7 0 859.55312 Q9Y262 Q9Y262 488 494 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.010047 153.88 By MS/MS 6.5 1.12 1 1 1 1 4 9376100 9376100 0 7044 2868 7301 17517;17518;17519;17520 12430;12431 12431 2 198830 0 IQLVAVNYIPEVR NLSKPEFNPTSIKFKIQLVAVNYIPEVRIM FKIQLVAVNYIPEVRIMSIPNLRYMKESQV K I Q V R I 1 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 1 3 0 0 13 0 1512.8664 Q9UJW0 Q9UJW0 298 310 DCTN4 Dynactin subunit 4 yes yes 2 9.3258E-05 155.48 By MS/MS 5.5 0.5 1 1 2 2549400 2549400 0 7045 2801 7302 17521;17522 12432 12432 1 21024 0 IQLVEEELDRAQER KATDAEADVASLNRRIQLVEEELDRAQERL RIQLVEEELDRAQERLATALQKLEEAEKAA R I Q E R L 1 2 0 1 0 2 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 14 1 1726.885 CON__Q3SX28;P67936;P09493;P07951;P06753 CON__Q3SX28 92 105 TPM4;TPM1;TPM2;TPM3 Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin beta chain;Tropomyosin alpha-3 chain yes no 2 0.0025462 130.69 By MS/MS 8 0 1 1 1312500 1312500 0 + 7046 58 7303 17523 12433 12433 1 86583 0 IQNFLNEFK EMKVSSTWLRDFQMKIQNFLNEFKNIPEIV RDFQMKIQNFLNEFKNIPEIVAVYSRIEQL K I Q F K N 0 0 2 0 0 1 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1151.5975 Q8TB03 Q8TB03 185 193 CXorf38 Uncharacterized protein CXorf38 yes yes 2 0.00067186 172.25 By MS/MS 7.5 0.5 1 1 2 475630 475630 0 7047 1985 7304 17524;17525 12434;12435 12434 2 31377 0 IQNMVSSGR LIEEDDVILLAAALRIQNMVSSGRRWLREQ LAAALRIQNMVSSGRRWLREQQHRRWRLHC R I Q G R R 0 1 1 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 0 1 0 0 9 0 990.49166 Q6UB35 Q6UB35 327 335 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.0094329 100.25 By MS/MS By matching 4 0 2 1 1 1527600 1450400 77147 7048 1726 7305 17526;17527 12436 12436 1230 1 39595 161200 IQQDADSVITVGR PSMWTRPQIKDFKEKIQQDADSVITVGRGE EKIQQDADSVITVGRGEVVTVRVPTHEEGS K I Q G R G 1 1 0 2 0 2 0 1 0 2 0 0 0 0 0 1 1 0 0 2 0 0 13 0 1400.726 Q9H3P7 Q9H3P7 387 399 ACBD3 Golgi resident protein GCP60 yes yes 2 1.874E-07 179.6 By MS/MS 5 0 1 1 2435300 2435300 0 7049 2491 7306 17528 12437 12437 1 100100 0 IQQEIAVQNPLVSER NCLAYDEAIMAQQDRIQQEIAVQNPLVSER IQQEIAVQNPLVSERLELSVLYKEYAEDDN R I Q E R L 1 1 1 0 0 3 2 0 0 2 1 0 0 0 1 1 0 0 0 2 0 0 15 0 1722.9264 Q96FW1 Q96FW1 37 51 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 2 3.488E-14 198.37 By MS/MS 8 0 1 1 1630300 1630300 0 7050 2173 7307 17529 12438 12438 1 107550 0 IQQGALELLR YTYESKMAFLTRVAKIQQGALELLRSGVIV TRVAKIQQGALELLRSGVIVRLAQCQVYDM K I Q L R S 1 1 0 0 0 2 1 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1139.6663 Q92621 Q92621 1566 1575 NUP205 Nuclear pore complex protein Nup205 yes yes 2 7.8814E-07 185.6 By MS/MS 3 1.29 1 1 2 1 1 6 2067200 2067200 0 7051 2070 7308 17530;17531;17532;17533;17534;17535 12439;12440 12440 2 78128 0 IQQIIEGK TKVDLAEKNVASPSRIQQIIEGKLFPMKAL NVASPSRIQQIIEGKLFPMKALGYFAVVTG R I Q G K L 0 0 0 0 0 2 1 1 0 3 0 1 0 0 0 0 0 0 0 0 0 0 8 0 927.53893 O60313 O60313 482 489 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0052664 144.12 By MS/MS 4.5 0.5 1 1 2 450270 450270 0 7052 244 7309 17536;17537 12441;12442 12441 2 18508 0 IQQLTALGAAQATAK KHAMKQAVMEMMSQKIQQLTALGAAQATAK IQQLTALGAAQATAKA______________ K I Q A K A 5 0 0 0 0 3 0 1 0 1 2 1 0 0 0 0 2 0 0 0 0 0 15 0 1483.8358 Q99471 Q99471 139 153 PFDN5 Prefoldin subunit 5 yes yes 2 8.1559E-38 239.38 By MS/MS 10 0 1 1 0 0 0 7053 2269 7310 17538 12443 12443 1 0 0 IQQNQSIR APDPFARSSPRTSMKIQQNQSIRRPSRQLA SPRTSMKIQQNQSIRRPSRQLAPNKPS___ K I Q I R R 0 1 1 0 0 3 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 985.53049 O75116 O75116 1369 1376 ROCK2 Rho-associated protein kinase 2 yes yes 2 0.017402 110.12 By MS/MS 4 0.816 1 1 1 3 1757700 1757700 0 7054 278 7311 17539;17540;17541 12444 12444 1 50056 0 IQQNTFTR PATEKDLAEDAPWKKIQQNTFTRWCNEHLK EDAPWKKIQQNTFTRWCNEHLKCVSKRIAN K I Q T R W 0 1 1 0 0 2 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 8 0 1006.5196 P21333;O75369 P21333 44 51 FLNA;FLNB Filamin-A;Filamin-B no no 2 0.005627 136.27 By MS/MS 3 1.41 1 1 1 1 1 5 3615000 3615000 0 7055 648;300 7312 17542;17543;17544;17545;17546 12445;12446 12445 2 149920 0 IQQQQPPPGEK AKKREKLEKFQQKQKIQQQQPPPGEKKPKP QKQKIQQQQPPPGEKKPKPEKREKRDPGVI K I Q E K K 0 0 0 0 0 4 1 1 0 1 0 1 0 0 3 0 0 0 0 0 0 0 11 0 1248.6463 P26640 P26640 253 263 VARS Valine--tRNA ligase yes yes 2 0.013046 117.53 By MS/MS 2.5 1.12 1 1 1 1 4 973390 973390 0 7056 699 7313 17547;17548;17549;17550 12447 12447 1 26518 0 IQQVANIAQK EVRQLSALGFVIPAKIQQVANIAQKFCKQA VIPAKIQQVANIAQKFCKQAIILKQVAHFY K I Q Q K F 2 0 1 0 0 3 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 10 0 1111.635 Q8NCM8 Q8NCM8 600 609 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.00010808 164.72 By MS/MS 1 0 1 1 163840 163840 0 7057 1954 7314 17551 12448 12448 1 8004.9 0 IQSIAPSLQVITSK LAVPGTYDPNQPIIRIQSIAPSLQVITSKQ RIQSIAPSLQVITSKQRPRKLTLMGSNGHE R I Q S K Q 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 3 1 0 0 1 0 0 14 0 1483.861 P42345 P42345 2153 2166 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.047832 70.438 By MS/MS 3 0.816 1 1 1 3 1044200 1044200 0 7058 849 7315 17552;17553;17554 12449 12449 1 38940 0 IQSPTEETEIFYHR FPQIGQIQYCSLEEKIQSPTEETEIFYHRG KIQSPTEETEIFYHRGV_____________ K I Q H R G 0 1 0 0 0 1 3 0 1 2 0 0 0 1 1 1 2 0 1 0 0 0 14 0 1748.837 Q6P4A7 Q6P4A7 322 335 SFXN4 Sideroflexin-4 yes yes 2;3 1.4963E-08 213.63 By MS/MS 5.5 2.87 1 1 2 2 6 14062000 14062000 0 7059 1709 7316 17555;17556;17557;17558;17559;17560 12450;12451;12452 12452 3 879360 0 IQSQFTDAQK NSQGSEMFGDDDKRKIQSQFTDAQKHYQTL DDKRKIQSQFTDAQKHYQTLVIQLPGYPQH K I Q Q K H 1 0 0 1 0 3 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 10 0 1164.5775 P15924 P15924 608 617 DSP Desmoplakin yes yes 2 0.00017356 157.75 By MS/MS 1.5 0.5 1 1 2 679870 679870 0 7060 603 7317 17561;17562 12453 12453 1 33766 0 IQTKEPLPTLPLGR VVTAVDPVADIATLRIQTKEPLPTLPLGRS RIQTKEPLPTLPLGRSADVRQGEFVVAMGS R I Q G R S 0 1 0 0 0 1 1 1 0 1 3 1 0 0 3 0 2 0 0 0 0 0 14 1 1561.9192 O43464 O43464 234 247 HTRA2 Serine protease HTRA2, mitochondrial yes yes 3 0.0055345 91.307 By MS/MS 8 0 1 1 842210 842210 0 7061 202 7318 17563 12454 12454 1 55561 0 IQTLTSSVR FLFRKKKEEVPEFTKIQTLTSSVRESSFVE VPEFTKIQTLTSSVRESSFVEKMKKTGRNI K I Q V R E 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 2 2 0 0 1 0 0 9 0 1003.5662 P16435 P16435 57 65 POR NADPH--cytochrome P450 reductase yes yes 2 0.00055753 152.06 By MS/MS By matching 5 0 2 1 1 3308600 3295300 13341 7062 607 7319 17564;17565 12455 12455 1 135450 39476 IQTQPGYANTLR FADIALAPMEAAKVRIQTQPGYANTLRDAA KVRIQTQPGYANTLRDAAPKMYKEEGLKAF R I Q L R D 1 1 1 0 0 2 0 1 0 1 1 0 0 0 1 0 2 0 1 0 0 0 12 0 1360.7099 Q00325 Q00325 190 201 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 6.7383E-33 258.01 By MS/MS By MS/MS 4.94 2.86 3 1 2 1 2 2 1 2 1 1 11 5 63701000 63057000 644240 7063 1230 7320 17566;17567;17568;17569;17570;17571;17572;17573;17574;17575;17576;17577;17578;17579;17580;17581 12456;12457;12458;12459;12460;12461;12462;12463;12464;12465;12466 12462 10 3598000 3895300 IQTSFYELPTDSHASLR DVESCYFAAQTMKMKIQTSFYELPTDSHAS TSFYELPTDSHASLRDSLLTHIQNLKDLSP K I Q L R D 1 1 0 1 0 1 1 0 1 1 2 0 0 1 1 3 2 0 1 0 0 0 17 0 1963.964 Q9Y5L0 Q9Y5L0 71 87 TNPO3 Transportin-3 yes yes 3 0.0433 58.246 By MS/MS 4 0 1 1 699150 699150 0 7064 2974 7321 17582 12467 12467 1 19086 0 IRDEMVATEQER MGVVVATGVNTEIGKIRDEMVATEQERTPL IGKIRDEMVATEQERTPLQQKLDEFGEQLS K I R E R T 1 2 0 1 0 1 3 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 12 1 1475.7038 P16615 P16615 235 246 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 0.00055633 187.85 By MS/MS 2.58 1.26 3 3 3 2 1 12 9842400 9842400 0 7065 608 7322;7323 17583;17584;17585;17586;17587;17588;17589;17590;17591;17592;17593;17594 12468;12469;12470;12471;12472;12473;12474;12475;12476;12477 12475 393 10 356500 0 IRDIDAATEAK YESRSLWKDVTFNLKIRDIDAATEAKHRLE FNLKIRDIDAATEAKHRLEERQRAEARERK K I R A K H 3 1 0 2 0 0 1 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 11 1 1201.6303 Q96SU4 Q96SU4 678 688 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 2 0.0034345 144.17 By MS/MS 4 0 1 1 773680 773680 0 7066 2257 7324 17595 12478;12479 12478 2 21121 0 IRDPNQGGK QPPQIAPKRERKTIRIRDPNQGGKDITEEI ERKTIRIRDPNQGGKDITEEIMSGARTAST R I R G K D 0 1 1 1 0 1 0 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 9 1 983.51484 Q04637;O43432 Q04637 182 190 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.017223 126.24 By MS/MS 2 0.816 1 1 1 3 5648100 5648100 0 7067 1264;200 7325 17596;17597;17598 12480 12480 1 271310 0 IRDPNQGGKDITEEIMSGAR QPPQIAPKRERKTIRIRDPNQGGKDITEEI QGGKDITEEIMSGARTASTPTPPQTGGGLE R I R A R T 1 2 1 2 0 1 2 3 0 3 0 1 1 0 1 1 1 0 0 0 0 0 20 2 2186.075 Q04637 Q04637 182 201 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.045623 59.163 By MS/MS 2.5 0.5 1 1 2 940400 940400 0 7068 1264 7326 17599;17600 12481 12481 1022 1 28828 0 IRDQLSAVASK LSKETLDTMLDGLGRIRDQLSAVASK____ GLGRIRDQLSAVASK_______________ R I R S K - 2 1 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 11 1 1186.667 Q9P000 Q9P000 188 198 COMMD9 COMM domain-containing protein 9 yes yes 2 0.0033388 144.7 By MS/MS 9 0 1 1 477590 477590 0 7069 2719 7327 17601 12482 12482 1 274090 0 IRDVTNNQEK VLQEVRNRSAPVYKRIRDVTNNQEKHFYTF PVYKRIRDVTNNQEKHFYTFTNEHHRETYV R I R E K H 0 1 2 1 0 1 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 10 1 1215.6208 Q9Y2L1 Q9Y2L1 109 118 DIS3 Exosome complex exonuclease RRP44 yes yes 2;3 8.8183E-10 205.18 By MS/MS 4.75 0.829 2 1 1 4 1460700 1460700 0 7070 2892 7328 17602;17603;17604;17605 12483;12484 12483 2 33086 0 IREDLPNLESSEETEQINK NDAVTIQVLNQLIQKIREDLPNLESSEETE LPNLESSEETEQINKHFHNTLEHLRLRRES K I R N K H 0 1 2 1 0 1 5 0 0 2 2 1 0 0 1 2 1 0 0 0 0 0 19 1 2243.0917 Q96QK1 Q96QK1 750 768 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.00016358 118.05 By MS/MS 5 0 1 1 2999700 2999700 0 7071 2242 7329 17606 12485 12485 1 123300 0 IREESGAR EVGSIIGKKGESVKRIREESGARINISEGN KGESVKRIREESGARINISEGNCPERIITL R I R A R I 1 2 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 8 1 916.47264 Q15365 Q15365 39 46 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.047802 145.16 By MS/MS By matching 8 0.707 1 2 1 2 2 2215100 2183400 31743 7072 1490 7330 17607;17608;17609;17610 12486 12486 1 187490 192220 IREEYPDRIMNTFSVVPSPK GGGTGSGMGTLLISKIREEYPDRIMNTFSV PDRIMNTFSVVPSPKVSDTVVEPYNATLSV K I R P K V 0 2 1 1 0 0 2 0 0 2 0 1 1 1 3 2 1 0 1 2 0 0 20 2 2377.21 P07437;P68371 P68371 155 174 TUBB;TUBB4B Tubulin beta chain;Tubulin beta-4B chain no no 3;4 0.0057874 76.301 By MS/MS 6.5 0.764 4 1 1 6 196460000 196460000 0 7073 1187;490 7331;7332 17611;17612;17613;17614;17615;17616 12487;12488;12489;12490 12489 279 4 1573800 0 IRELTAVVQK LATRTQNVLGEKGRRIRELTAVVQKRFGFP EKGRRIRELTAVVQKRFGFPEGSVELYAEK R I R Q K R 1 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 10 1 1155.6976 P23396 P23396 66 75 RPS3 40S ribosomal protein S3 yes yes 3 0.0023882 117.71 By MS/MS 8 0 1 1 4584000 4584000 0 7074 668 7333 17617 12491 12491 1 302410 0 IRGGSEGGCPR VTGVEASDDANSYWRIRGGSEGGCPRGSPV SYWRIRGGSEGGCPRGSPVRCGQAVRLTHV R I R P R G 0 2 0 0 1 0 1 4 0 1 0 0 0 0 1 1 0 0 0 0 0 0 11 1 1144.5407 Q9HCN8 Q9HCN8 84 94 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2;3 0.0042327 121.36 By MS/MS 9.33 0.471 2 1 3 1749200 1749200 0 7075 2563 7334 17618;17619;17620 12492;12493 12493 2 1014600 0 IRLEETLEQLAK SKKWQKSLQYERDQRIRLEETLEQLAKQHN DQRIRLEETLEQLAKQHNHLERAFRGATVL R I R A K Q 1 1 0 0 0 1 3 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 12 1 1441.814 P22059 P22059 302 313 OSBP Oxysterol-binding protein 1 yes yes 2 0.0091751 130.56 By MS/MS 4.5 0.5 1 1 2 684110 684110 0 7076 654 7335 17621;17622 12494 12494 1 19419 0 IRLENEIQTYR TECQNTEYQQLLDIKIRLENEIQTYRSLLE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG K I R Y R S 0 2 1 0 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 1 1433.7627 CON__P13645;P13645 CON__P13645 440 450 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 4.1708E-10 208.15 By MS/MS By MS/MS 5.3 2.73 3 4 3 2 3 3 1 2 2 15 8 30598000 26932000 3665500 + 7077 49 7336 17623;17624;17625;17626;17627;17628;17629;17630;17631;17632;17633;17634;17635;17636;17637;17638;17639;17640;17641;17642;17643;17644;17645 12495;12496;12497;12498;12499;12500;12501;12502;12503;12504;12505;12506;12507 12506 13 4436400 5742600 IRLESEEEGVPSTAIR KGRHKTTGQVVAMKKIRLESEEEGVPSTAI RLESEEEGVPSTAIREISLLKELRHPNIVS K I R I R E 1 2 0 0 0 0 4 1 0 2 1 0 0 0 1 2 1 0 0 1 0 0 16 1 1784.9268 P06493 P06493 35 50 CDK1 Cyclin-dependent kinase 1 yes yes 2;3 1.0371E-06 209.19 By MS/MS 8 0 2 2 11699000 11699000 0 7078 477 7337 17646;17647 12508;12509;12510 12509 3 771810 0 IRLHVENEDKK HGMIMLRISDDKYGRIRLHVENEDKKGVQL KYGRIRLHVENEDKKGVQLQTHPNVDKKLF R I R K K G 0 1 1 1 0 0 2 0 1 1 1 2 0 0 0 0 0 0 0 1 0 0 11 2 1379.7521 P48444 P48444 313 323 ARCN1 Coatomer subunit delta yes yes 4 0.011091 82.494 By MS/MS 6.5 0.5 1 1 2 2696300 2696300 0 7079 903 7338 17648;17649 12511 12511 1 21513 0 IRPVPEYQK GSEGTLGVITEATIKIRPVPEYQKYGSVAF TEATIKIRPVPEYQKYGSVAFPNFEQGVAC K I R Q K Y 0 1 0 0 0 1 1 0 0 1 0 1 0 0 2 0 0 0 1 1 0 0 9 1 1128.6291 O00116 O00116 381 389 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 0.030925 76.221 By MS/MS 5 0 1 1 1873000 1873000 0 7080 67 7339 17650 12512 12512 1 76989 0 ISADTHQFSVTER QYFITVVPTKLHTYKISADTHQFSVTERER YKISADTHQFSVTERERIINHAAGSHGVSG K I S E R E 1 1 0 1 0 1 1 0 1 1 0 0 0 1 0 2 2 0 0 1 0 0 13 0 1489.7161 Q96RQ1 Q96RQ1 263 275 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 yes yes 2 5.0828E-14 179.94 By MS/MS 7 0 1 1 1146500 1146500 0 7081 2248 7340 17651 12513 12513 0 20489 0 ISAEGGEQVER PQLGAYAPPPHIIGRISAEGGEQVERVVEG IIGRISAEGGEQVERVVEGPAQAMSRGTMI R I S E R V 1 1 0 0 0 1 3 2 0 1 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1173.5626 Q9BQE5 Q9BQE5 249 259 APOL2 Apolipoprotein L2 yes yes 2 8.8554E-49 289.67 By MS/MS 7 0 1 1 3883700 3883700 0 7082 2316 7341 17652 12514 12514 1 69402 0 ISAFGYLECSAK QEPVRSEEGRDMANRISAFGYLECSAKTKE ANRISAFGYLECSAKTKEGVREVFEMATRA R I S A K T 2 0 0 0 1 0 1 1 0 1 1 1 0 1 0 2 0 0 1 0 0 0 12 0 1344.6384 P08134 P08134 151 162 RHOC Rho-related GTP-binding protein RhoC yes yes 2 2.1563E-05 172.21 By MS/MS 9 0 1 1 1035900 1035900 0 7083 498 7342 17653 12515 12515 1 594520 0 ISAHSQQHNR VRDLENLGERALPYRISAHSQQHNRGGYFL ALPYRISAHSQQHNRGGYFLVDFYAPTAAV R I S N R G 1 1 1 0 0 2 0 0 2 1 0 0 0 0 0 2 0 0 0 0 0 0 10 0 1176.5748 P82932 P82932 51 60 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.0001244 162.88 By MS/MS 10 0 1 1 388390 388390 0 7084 1210 7343 17654 12516 12516 1 412820 0 ISALALLK AKPWTKDHHYFKYCKISALALLKMVMHARS HYFKYCKISALALLKMVMHARSGGNLEVMG K I S L K M 2 0 0 0 0 0 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 8 0 827.54804 Q92905 Q92905 57 64 COPS5 COP9 signalosome complex subunit 5 yes yes 2 0.0081763 125.25 By MS/MS 7.5 0.5 1 1 2 1024300 1024300 0 7085 2089 7344 17655;17656 12517 12517 1 32948 0 ISAPQER LSEVKKLAPKDVKIRISAPQERLYSTWIGG APKDVKIRISAPQERLYSTWIGGSILASLD R I S E R L 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 7 0 799.41882 P42025;P61163 P61163 330 336 ACTR1B;ACTR1A Beta-centractin;Alpha-centractin no no 2 0.036721 110.31 By MS/MS 7 0 1 1 8637800 8637800 0 7086 1090;843 7345 17657 12518 12518 1 154360 0 ISASLLDSR DPHHDYCEDWPEAQRISASLLDSRSYETLV WPEAQRISASLLDSRSYETLVDFDNHLDDI R I S S R S 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 3 0 0 0 0 0 0 9 0 960.52401 O43402 O43402 170 178 EMC8 ER membrane protein complex subunit 8 yes yes 2 4.244E-06 180.44 By MS/MS 9 0 1 1 3263600 3263600 0 7087 198 7346 17658 12519 12519 1 1873000 0 ISATSIFFESMPYK DGGHLTHGYMSDVKRISATSIFFESMPYKL RISATSIFFESMPYKLNPKTGLIDYNQLAL R I S Y K L 1 0 0 0 0 0 1 0 0 2 0 1 1 2 1 3 1 0 1 0 0 0 14 0 1619.7905 P34897;P34896 P34897 183 196 SHMT2;SHMT1 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase, cytosolic yes no 2 3.1002E-12 202.03 By MS/MS 6 0 2 2 3105200 3105200 0 7088 777 7347;7348 17659;17660 12520;12521 12520 531 2 24214 0 ISAVESQPSR EAPDQKTLSAPQEERISAVESQPSRKRSVS PQEERISAVESQPSRKRSVSHGSNHTQKPD R I S S R K 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 3 0 0 0 1 0 0 10 0 1072.5513 Q9Y520 Q9Y520 912 921 PRRC2C Protein PRRC2C yes yes 2 0.0040574 110.53 By MS/MS By matching 1 0 2 1 1 602230 581800 20426 7089 2963 7349 17661;17662 12522 12522 1 28426 20426 ISAVSVAER DRAAECNIVVTQPRRISAVSVAERVAFERG VTQPRRISAVSVAERVAFERGEEPGKSCGY R I S E R V 2 1 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 9 0 930.51345 Q08211 Q08211 448 456 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00058512 151.44 By MS/MS 2 0.816 1 1 1 3 2323000 2323000 0 7090 1287 7350 17663;17664;17665 12523 12523 1 69866 0 ISAVSVAQR GRGARCNVIITQPRRISAVSVAQRVSHELG ITQPRRISAVSVAQRVSHELGPSLRRNVGF R I S Q R V 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 9 0 929.52943 Q7L2E3 Q7L2E3 494 502 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00015207 167.23 By MS/MS 2.5 1.12 1 1 1 1 4 4604600 4604600 0 7091 1763 7351 17666;17667;17668;17669 12524;12525;12526 12526 3 126330 0 ISDDKYGR GGLQNMELHGMIMLRISDDKYGRIRLHVEN HGMIMLRISDDKYGRIRLHVENEDKKGVQL R I S G R I 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 0 8 1 952.46141 P48444 P48444 305 312 ARCN1 Coatomer subunit delta yes yes 2 0.012253 162.25 By MS/MS 6 0 1 1 4168400 4168400 0 7092 903 7352 17670 12527 12527 1 32505 0 ISDEGIAYLVK QQQRLLDIAKKENVKISDEGIAYLVKVSEG ENVKISDEGIAYLVKVSEGDLRKAITFLQS K I S V K V 1 0 0 1 0 0 1 1 0 2 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1206.6496 P35249 P35249 222 232 RFC4 Replication factor C subunit 4 yes yes 2 9.3245E-11 204.07 By MS/MS 7.5 0.5 1 1 2 8071400 8071400 0 7093 785 7353 17671;17672 12528;12529 12528 2 181130 0 ISDFGLATVFR IKPENLLLDERDNLKISDFGLATVFRYNNR DNLKISDFGLATVFRYNNRERLLNKMCGTL K I S F R Y 1 1 0 1 0 0 0 1 0 1 1 0 0 2 0 1 1 0 0 1 0 0 11 0 1224.6503 O14757 O14757 146 156 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 2 9.5056E-07 178.84 By MS/MS 6 0 1 1 838410 838410 0 7094 126 7354 17673 12530 12530 1 6537.9 0 ISDLCVALSK RKPEQHRLVVPKKGKISDLCVALSKHTGIS PKKGKISDLCVALSKHTGISPERMMVADVF K I S S K H 1 0 0 1 1 0 0 0 0 1 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1104.5849 P51784 P51784 522 531 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.00097839 123.86 By MS/MS 4 0 1 1 560650 560650 0 7095 976 7355 17674 12531 12531 1 15305 0 ISDLGGGVPLR VKTLVTLGKEDLSIKISDLGGGVPLRKIDR LSIKISDLGGGVPLRKIDRLFNYMYSTAPR K I S L R K 0 1 0 1 0 0 0 3 0 1 2 0 0 0 1 1 0 0 0 1 0 0 11 0 1082.6084 Q15120 Q15120 285 295 PDK3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 2 0.001281 152.34 By MS/MS 6.5 0.5 1 1 2 4844600 4844600 0 7096 1481 7356 17675;17676 12532 12532 1 65843 0 ISDQNIIPSVTR QLALLLQQFQTLKMRISDQNIIPSVTRSVS KMRISDQNIIPSVTRSVSVPDTGSIWELQP R I S T R S 0 1 1 1 0 1 0 0 0 3 0 0 0 0 1 2 1 0 0 1 0 0 12 0 1341.7252 Q6Y7W6 Q6Y7W6 670 681 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 0.0015802 126.71 By MS/MS 3 0 1 1 1147800 1147800 0 7097 1736 7357 17677 12533 12533 1 29963 0 ISDSVLVDIK GYEQAARVAIEHLDKISDSVLVDIKDTEPL EHLDKISDSVLVDIKDTEPLIQTAKTTLGS K I S I K D 0 0 0 2 0 0 0 0 0 2 1 1 0 0 0 2 0 0 0 2 0 0 10 0 1087.6125 P48643 P48643 151 160 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.00036248 150.35 By MS/MS 7 0.816 1 1 1 3 3762300 3762300 0 7098 909 7358 17678;17679;17680 12534 12534 1 38812 0 ISDSVLVDIKDTEPLIQTAK GYEQAARVAIEHLDKISDSVLVDIKDTEPL LVDIKDTEPLIQTAKTTLGSKVVNSCHRQM K I S A K T 1 0 0 3 0 1 1 0 0 3 2 2 0 0 1 2 2 0 0 2 0 0 20 1 2184.1889 P48643 P48643 151 170 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 2.4426E-39 247.11 By MS/MS 6 0 2 2 41016000 41016000 0 7099 909 7359 17681;17682 12535;12536 12536 2 319850 0 ISDTEELPEFK TLISGAVVEQLDFLRISDTEELPEFKSFEE DFLRISDTEELPEFKSFEELEPPKHSKVKR R I S F K S 0 0 0 1 0 0 3 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1306.6293 Q93100 Q93100 673 683 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 2 0.0015905 125.75 By MS/MS 3.5 0.5 1 1 2 1041300 1041300 0 7100 2100 7360 17683;17684 12537;12538 12537 2 28356 0 ISEADKSKPK VEKWWHQRIKEQASKISEADKSKPKFYVLS EQASKISEADKSKPKFYVLSMFPYPSGKLH K I S P K F 1 0 0 1 0 0 1 0 0 1 0 3 0 0 1 2 0 0 0 0 0 0 10 2 1101.603 Q15031 Q15031 74 83 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 7.3007E-15 223.36 By MS/MS 6 2 1 1 1 1 1 1 1 7 1807800 1807800 0 7101 1467 7361 17685;17686;17687;17688;17689;17690;17691 12539;12540;12541 12539 3 96838 0 ISEAETLCTK WSLSQAVTGLIDTGRISEAETLCTKNLKSN IDTGRISEAETLCTKNLKSNPDQPAVILLL R I S T K N 1 0 0 0 1 0 2 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 10 0 1150.554 Q6PGP7 Q6PGP7 1342 1351 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00024755 154.85 By MS/MS 3 0.816 1 1 1 3 1240900 1240900 0 7102 1714 7362 17692;17693;17694 12542 12542 1 34560 0 ISEIEDAAFLAR ITYGQKVMEKETEKKISEIEDAAFLAREKA EKKISEIEDAAFLAREKAKADAECYTAMKI K I S A R E 3 1 0 1 0 0 2 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 12 0 1333.6878 O75477;O94905 O94905 242 253 ERLIN1;ERLIN2 Erlin-1;Erlin-2 no no 2 7.5812E-17 227.27 By MS/MS By matching 7 0 2 1 1 11307000 11283000 23778 7103 357;312 7363 17695;17696 12543 12543 1 201640 97612 ISEIEKEIAR ______________________________ GILEKISEIEKEIARTQKNKATEYHLGLLK K I S A R T 1 1 0 0 0 0 3 0 0 3 0 1 0 0 0 1 0 0 0 0 0 0 10 1 1186.6558 P55039 P55039 7 16 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 3 0.025638 77.533 By MS/MS 7 0 1 1 1053600 1053600 0 7104 1024 7364 17697 12544 12544 1 18829 0 ISELSGCTPDPR RCQYVVTCAGLYSDRISELSGCTPDPRIVP SDRISELSGCTPDPRIVPFRGDYLLLKPEK R I S P R I 0 1 0 1 1 0 1 1 0 1 1 0 0 0 2 2 1 0 0 0 0 0 12 0 1330.6187 Q9H9P8 Q9H9P8 266 277 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.00025436 150.1 By MS/MS 7 0 1 1 5877000 5877000 0 7105 2536 7365 17698 12545 12545 1 105020 0 ISEQFSAMFR TFIGNSTAIQELFKRISEQFSAMFRRKAFL ELFKRISEQFSAMFRRKAFLHWFTGEGMDE R I S F R R 1 1 0 0 0 1 1 0 0 1 0 0 1 2 0 2 0 0 0 0 0 0 10 0 1214.5754 Q9BUF5 Q9BUF5 381 390 TUBB6 Tubulin beta-6 chain yes yes 2 0.051374 78.655 By MS/MS 6 0 1 1 1269700 1269700 0 7106 2363 7366 17699 12546 12546 1 9901.2 0 ISEQFTAMFR TFIGNSTAIQELFKRISEQFTAMFRRKAFL ELFKRISEQFTAMFRRKAFLHWYTGEGMDE R I S F R R 1 1 0 0 0 1 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 0 10 0 1228.591 P07437;P68371;Q13885;Q9BVA1;P04350;Q13509 P68371 381 390 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 2 1.1307E-15 214.71 By MS/MS By matching 6 2.61 1 1 1 3 3 1 1 1 10 2 250030000 249710000 313110 7107 1187;490;1400;2375;451;1377 7367;7368 17700;17701;17702;17703;17704;17705;17706;17707;17708;17709;17710;17711 12547;12548;12549;12550;12551;12552;12553;12554 12550 234 8 7175100 992910 ISEQSDAK SQHQALLGTIRADGKISEQSDAKLKEIVTN TIRADGKISEQSDAKLKEIVTNFLAGFEA_ K I S A K L 1 0 0 1 0 1 1 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 8 0 876.41888 P25705 P25705 532 539 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00024655 190.26 By MS/MS By MS/MS 6 0 2 1 1 27317000 27230000 87555 7108 687 7369 17712;17713 12555;12556 12556 2 212340 268520 ISEVVELLK DRLDAIEDLMVVPDKISEVVELLKKLPDLE MVVPDKISEVVELLKKLPDLERLLSKIHNV K I S L K K 0 0 0 0 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 9 0 1028.6118 P52701 P52701 805 813 MSH6 DNA mismatch repair protein Msh6 yes yes 2 1.0469E-05 176.44 By MS/MS 3 0 1 1 388900 388900 0 7109 989 7370 17714 12557 12557 1 10152 0 ISFLENNLEQLTK IDSDDTGGSAAQKQKISFLENNLEQLTKVH QKISFLENNLEQLTKVHKQLVRDNADLRCE K I S T K V 0 0 2 0 0 1 2 0 0 1 3 1 0 1 0 1 1 0 0 0 0 0 13 0 1547.8195 P33176;Q12840;O60282 P33176 832 844 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 1.7939E-17 215.77 By MS/MS 3.5 0.5 1 1 2 2675100 2675100 0 7110 767 7371 17715;17716 12558 12558 1 72968 0 ISFSNIISDMK HEEESRAQRDAKRPKISFSNIISDMKVARS KRPKISFSNIISDMKVARSATARVRSRPEL K I S M K V 0 0 1 1 0 0 0 0 0 3 0 1 1 1 0 3 0 0 0 0 0 0 11 0 1253.6326 Q92665 Q92665 199 209 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 1.9503E-07 190.57 By MS/MS By matching 7 0 2 1 1 11855000 11828000 26586 7111 2073 7372 17717;17718 12559 12559 1360 1 211370 109140 ISGADINSICQESGMLAVR SEEVDLEDYVARPDKISGADINSICQESGM DINSICQESGMLAVRENRYIVLAKDFEKAY K I S V R E 2 1 1 1 1 1 1 2 0 3 1 0 1 0 0 3 0 0 0 1 0 0 19 0 2019.9718 P43686 P43686 370 388 PSMC4 26S protease regulatory subunit 6B yes yes 2 7.315E-15 189.33 By MS/MS 6 0 1 1 3043900 3043900 0 7112 867 7373 17719 12560 12560 1 23736 0 ISGLGLTPEQK AYKTMKEDEKRYNERISGLGLTPEQKQKKA YNERISGLGLTPEQKQKKAALSASEGEEVP R I S Q K Q 0 0 0 0 0 1 1 2 0 1 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1141.6343 O95831 O95831 99 109 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.5709E-05 196.52 By MS/MS By matching 7.33 1.89 2 1 1 1 1 5 1 47945000 47799000 146190 7113 409 7374 17720;17721;17722;17723;17724;17725 12561;12562 12562 2 7052300 432570 ISGLIYEETR KPAIRRLARRGGVKRISGLIYEETRGVLKV GGVKRISGLIYEETRGVLKVFLENVIRDAV R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 0.00075314 153.97 By MS/MS 9.5 0.5 1 1 2 658050 658050 0 7114 1144 7375 17726;17727 12563 12563 1 624590 0 ISGQVVR KIRELTSSRIGLLTRISGQVVRTHPVHPEL SRIGLLTRISGQVVRTHPVHPELVSGTFLC R I S V R T 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 7 0 757.44464 Q14566 Q14566 137 143 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.043839 105.39 By MS/MS 2.5 1.12 1 1 1 1 4 5268500 5268500 0 7115 1436 7376 17728;17729;17730;17731 12564 12564 1 146750 0 ISHGEVLEWQK RCGIIHVRGPMPPNRISHGEVLEWQKTFEE PPNRISHGEVLEWQKTFEEKLTPLLSVRES R I S Q K T 0 0 0 0 0 1 2 1 1 1 1 1 0 0 0 1 0 1 0 1 0 0 11 0 1324.6776 Q9BXP5 Q9BXP5 654 664 SRRT Serrate RNA effector molecule homolog yes yes 2;3 0.00051947 141.95 By MS/MS 3.5 0.5 2 2 4 2023100 2023100 0 7116 2402 7377 17732;17733;17734;17735 12565;12566 12566 2 55016 0 ISHLPLVEELR MYPKYDRITNHIHVRISHLPLVEELRSLRQ IHVRISHLPLVEELRSLRQLHLNQLIRTSG R I S L R S 0 1 0 0 0 0 2 0 1 1 3 0 0 0 1 1 0 0 0 1 0 0 11 0 1304.7452 P49736 P49736 285 295 MCM2 DNA replication licensing factor MCM2 yes yes 2;3 0.0056205 94.82 By MS/MS 4 0.707 1 2 1 4 2275800 2275800 0 7117 928 7378 17736;17737;17738;17739 12567;12568 12567 2 63048 0 ISHLVLPVQPENALKR YNHMDPDKLNGLWSRISHLVLPVQPENALK SHLVLPVQPENALKRGICL___________ R I S K R G 1 1 1 0 0 1 1 0 1 1 3 1 0 0 2 1 0 0 0 2 0 0 16 1 1813.0574 Q5JTV8 Q5JTV8 564 579 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 3 0.0061521 93.228 By MS/MS 6 0 1 1 2414600 2414600 0 7118 1610 7379 17740 12569 12569 1 18829 0 ISHQSQDKK MQKQGCDCECLGGGRISHQSQDKKIHVYGY CLGGGRISHQSQDKKIHVYGYSMAYGPAQH R I S K K I 0 0 0 1 0 2 0 0 1 1 0 2 0 0 0 2 0 0 0 0 0 0 9 1 1069.5516 Q9NRX4 Q9NRX4 79 87 PHPT1 14 kDa phosphohistidine phosphatase yes yes 2 0.010149 117.53 By MS/MS 10 0 1 1 105710 105710 0 7119 2615 7380 17741 12570 12570 1 112360 0 ISIGGGSCAISGGYGSR GFGSRSLYGLGGSKRISIGGGSCAISGGYG IGGGSCAISGGYGSRAGGSYGFGGAGSGFG R I S S R A 1 1 0 0 1 0 0 6 0 3 0 0 0 0 0 4 0 0 1 0 0 0 17 0 1597.7519 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 70 86 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.0001087 135.04 By MS/MS By MS/MS 6.5 2.16 1 1 2 1 1 2 1 1 4 6 4076900 2112800 1964100 + 7120 36;53;449 7381 17742;17743;17744;17745;17746;17747;17748;17749;17750;17751 12571;12572;12573;12574;12575;12576 12576 6 254040 4735800 ISIGNVVK ______________________________ MVALSLKISIGNVVKTMQFEPSTMVYDACR K I S V K T 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 2 0 0 8 0 828.5069 Q9Y490 Q9Y490 8 15 TLN1 Talin-1 yes yes 2 0.031717 98.523 By MS/MS 2 0 1 1 352350 352350 0 7121 2947 7382 17752 12577 12577 1 17514 0 ISIMAER FRKVIEEQLEPAVEKISIMAERLANQFAIY QLEPAVEKISIMAERLANQFAIYKPVTDFF K I S E R L 1 1 0 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 7 0 818.43202 P42704 P42704 1237 1243 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0047643 168.45 By MS/MS 3 0 1 1 4954100 4954100 0 7122 854 7383 17753 12578 12578 606 1 129330 0 ISIPVDISDSDMMLNIINSSITTK AYRKALDDMISTLKKISIPVDISDSDMMLN SDMMLNIINSSITTKAISRWSSLACNIALD K I S T K A 0 0 2 3 0 0 0 0 0 6 1 1 2 0 1 5 2 0 0 1 0 0 24 0 2606.3183 P49368 P49368 140 163 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 5.1293E-07 114.54 By MS/MS 6 0 2 2 6261600 6261600 0 7123 916 7384 17754;17755 12579;12580 12579 671;672 2 48828 0 ISISTSGGSFR GYGSRSLYNLGGSKRISISTSGGSFRNRFG GSKRISISTSGGSFRNRFGAGAGGGYGFGG R I S F R N 0 1 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 0 11 0 1110.5669 CON__P13647;P13647 CON__P13647 74 84 KRT5 Keratin, type II cytoskeletal 5 yes no 2 1.3763E-05 174.86 By MS/MS By MS/MS 6.08 2.92 1 1 1 1 2 1 1 1 2 2 4 9 22632000 9108500 13523000 + 7124 50 7385 17756;17757;17758;17759;17760;17761;17762;17763;17764;17765;17766;17767;17768 12581;12582;12583;12584;12585;12586;12587;12588;12589;12590;12591 12585 11 2706600 40705000 ISKDLANICK WDRLRELFGKDEQQRISKDLANICKTAATA DEQQRISKDLANICKTAATAGIIGWVYGGI R I S C K T 1 0 1 1 1 0 0 0 0 2 1 2 0 0 0 1 0 0 0 0 0 0 10 1 1160.6223 Q9NPL8 Q9NPL8 70 79 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2;3 0.0021443 115.7 By MS/MS 8.33 0.471 2 1 3 2477300 2477300 0 7125 2583 7386 17769;17770;17771 12592;12593 12592 2 182500 0 ISKESEDFIVEQYK DIRRYLLFARQFKPKISKESEDFIVEQYKH KISKESEDFIVEQYKHLRQRDGSGVTKSSW K I S Y K H 0 0 0 1 0 1 3 0 0 2 0 2 0 1 0 2 0 0 1 1 0 0 14 1 1713.8461 Q14566 Q14566 586 599 MCM6 DNA replication licensing factor MCM6 yes yes 3 0.04407 59.68 By MS/MS 4 0 1 1 2580100 2580100 0 7126 1436 7387 17772 12594 12594 1 70434 0 ISLADIAQK VIKTGVRMISLSYSRISLADIAQKLQLDSP SLSYSRISLADIAQKLQLDSPEDAEFIVAK R I S Q K L 2 0 0 1 0 1 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 9 0 957.5495 O43242 O43242 417 425 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.0010268 141.52 By MS/MS 3 2.16 1 1 1 3 8961600 8961600 0 7127 187 7388 17773;17774;17775 12595;12596 12596 2 82596 0 ISLDQIDLLSTK SYTGQDYSTQGNVGKISLDQIDLLSTKSFP VGKISLDQIDLLSTKSFPPCMRQLHKALRE K I S T K S 0 0 0 2 0 1 0 0 0 2 3 1 0 0 0 2 1 0 0 0 0 0 12 0 1344.75 P49643 P49643 271 282 PRIM2 DNA primase large subunit yes yes 2 2.1062E-16 214.82 By MS/MS 6.5 0.5 1 1 2 2600000 2600000 0 7128 924 7389 17776;17777 12597;12598 12597 2 22567 0 ISLEDIQAFEK QDRDWEAYWRLLFKKISLEDIQAFEKTYKG LFKKISLEDIQAFEKTYKGSEEELADIKQA K I S E K T 1 0 0 1 0 1 2 0 0 2 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1291.666 Q8WXX5 Q8WXX5 108 118 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 2 5.7711E-05 168.22 By MS/MS 8 0 1 1 694610 694610 0 7129 2048 7390 17778 12599 12599 1 45823 0 ISLESEYEK SKMDPELEKKLKENKISLESEYEKIKDSKF KLKENKISLESEYEKIKDSKFDDWKNIRGP K I S E K I 0 0 0 0 0 0 3 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 9 0 1096.5288 Q9P0S2 Q9P0S2 61 69 COX16 Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial yes yes 2 8.0234E-06 176.6 By MS/MS 10 0 1 1 1105100 1105100 0 7130 2730 7391 17779 12600 12600 1 1174600 0 ISLEYSELQDK RLQDLATQLQEKHHRISLEYSELQDKVTSA KHHRISLEYSELQDKVTSAETKVLEMETTV R I S D K V 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 2 0 0 1 0 0 0 11 0 1323.6558 O75150 O75150 254 264 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.0016195 139.15 By MS/MS 3 0 1 1 499300 499300 0 7131 283 7392 17780 12601 12601 1 13034 0 ISLGLPVGAVINCADNTGAK MSKRGRGGSSGAKFRISLGLPVGAVINCAD PVGAVINCADNTGAKNLYIISVKGIKGRLN R I S A K N 3 0 2 1 1 0 0 3 0 2 2 1 0 0 1 1 1 0 0 2 0 0 20 0 1969.0303 P62829 P62829 16 35 RPL23 60S ribosomal protein L23 yes yes 2;3 0.0021968 111.88 By MS/MS 10 0 2 2 1439300 1439300 0 7132 1147 7393 17781;17782 12602;12603 12602 2 1529800 0 ISLPVILMDETLK QITPLNVTQWLMVLKISLPVILMDETLKFV LKISLPVILMDETLKFVARNYLEPGKECVQ K I S L K F 0 0 0 1 0 0 1 0 0 2 3 1 1 0 1 1 1 0 0 1 0 0 13 0 1470.8368 P16615 P16615 972 984 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.00042789 135.99 By MS/MS 3 1.41 1 1 1 1 1 5 2475100 2475100 0 7133 608 7394 17783;17784;17785;17786;17787 12604;12605;12606;12607;12608;12609 12609 394 6 83830 0 ISLSTLQQQLGQPEK YGKVVDLAPLHLDARISLSTLQQQLGQPEK ISLSTLQQQLGQPEKALEALEPMYDPDTLA R I S E K A 0 0 0 0 0 4 1 1 0 1 3 1 0 0 1 2 1 0 0 0 0 0 15 0 1668.9046 Q9Y5Q9 Q9Y5Q9 494 508 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 1.9337E-28 238.07 By MS/MS 4 0 1 1 1141300 1141300 0 7134 2978 7395 17788 12610 12610 1 31157 0 ISNIPSLIFLDATTGK YKEKHRKLKLWNKYRISNIPSLIFLDATTG SNIPSLIFLDATTGKVVCRNGLLVIRDDPE R I S G K V 1 0 1 1 0 0 0 1 0 3 2 1 0 1 1 2 2 0 0 0 0 0 16 0 1688.9349 Q6DKJ4 Q6DKJ4 129 144 NXN Nucleoredoxin yes yes 2 6.4897E-06 145.52 By MS/MS 6 0 1 1 612060 612060 0 7135 1678 7396 17789 12611 12611 1 4772.9 0 ISNQFDWALMR KEKDIQEESTFSSRKISNQFDWALMRLDLS SSRKISNQFDWALMRLDLSVRRTGRIPKKL K I S M R L 1 1 1 1 0 1 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 0 11 0 1379.6656 P42704 P42704 79 89 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00033608 161.67 By MS/MS 3.33 0.471 2 1 3 6543900 6543900 0 7136 854 7397;7398 17790;17791;17792 12612;12613 12613 607 2 171070 0 ISNQVDLSNVCAQYR EKERMLRESLKEYQKISNQVDLSNVCAQYR ISNQVDLSNVCAQYRQVRFYEGVVELSLTA K I S Y R Q 1 1 2 1 1 2 0 0 0 1 1 0 0 0 0 2 0 0 1 2 0 0 15 0 1765.8417 O75694 O75694 907 921 NUP155 Nuclear pore complex protein Nup155 yes yes 2 3.6778E-38 291.22 By MS/MS 3.5 0.5 1 1 2 1932600 1932600 0 7137 324 7399 17793;17794 12614 12614 1 51177 0 ISNSSTANR NDPLVRSAIEQVRFRISNSSTANRVKTSQP EQVRFRISNSSTANRVKTSQPPVPQGEAEE R I S N R V 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 9 0 948.46247 Q12789 Q12789 714 722 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00088749 150.36 By MS/MS 1.5 0.5 1 1 2 415380 415380 0 7138 1306 7400 17795;17796 12615 12615 1 20621 0 ISNYGWDQSDKFVK PAAVVAPITTGYTVKISNYGWDQSDKFVKI KISNYGWDQSDKFVKIYITLTGVHQVPTEN K I S V K I 0 0 1 2 0 1 0 1 0 1 0 2 0 1 0 2 0 1 1 1 0 0 14 1 1685.8049 Q9HB71 Q9HB71 75 88 CACYBP Calcyclin-binding protein yes yes 3 0.053144 57.106 By MS/MS 8 0 1 1 4617700 4617700 0 7139 2549 7401 17797 12616 12616 1 304630 0 ISPGGISQILDLVK HSDPELLKQKLQSYKISPGGISQILDLVKG KISPGGISQILDLVKGTHYQVACQKYFEMI K I S V K G 0 0 0 1 0 1 0 2 0 3 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1438.8395 P49643 P49643 403 416 PRIM2 DNA primase large subunit yes yes 2 0.00096511 124.12 By MS/MS 6 0 1 1 889280 889280 0 7140 924 7402 17798 12617 12617 1 6934.6 0 ISQATAQIK DFSSIIQTCSGNIQRISQATAQIKNLMSQL SGNIQRISQATAQIKNLMSQLGTKQDSSKL R I S I K N 2 0 0 0 0 2 0 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 9 0 958.54475 Q86Y82 Q86Y82 36 44 STX12 Syntaxin-12 yes yes 2 0.00098646 142.43 By MS/MS 7.5 0.5 1 1 2 792310 792310 0 7141 1846 7403 17799;17800 12618 12618 1 20282 0 ISQDLALIAR DYIRDWTAHREEIARISQDLALIAREINDV EEIARISQDLALIAREINDVAGEIDSVTSS R I S A R E 2 1 0 1 0 1 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1098.6397 Q5SW79;Q96L14 Q5SW79 1305 1314 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 2 5.702E-05 170.5 By MS/MS 3 0.816 1 1 1 3 1566900 1566900 0 7142 1621 7404 17801;17802;17803 12619;12620 12619 2 61357 0 ISQHEAK KMEENEKELAACQLRISQHEAKIKSLTEYL ELAACQLRISQHEAKIKSLTEYLQNVEQKK R I S A K I 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 7 0 811.41882 P33176 P33176 636 642 KIF5B Kinesin-1 heavy chain yes yes 2 0.045219 104.44 By MS/MS 4 0 1 1 106260 106260 0 7143 767 7405 17804 12621 12621 1 2900.9 0 ISQLQAELR PLRAAAEQLRQKDLRISQLQAELRRPPPAP RQKDLRISQLQAELRRPPPAPAQPPEPEAL R I S L R R 1 1 0 0 0 2 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1056.5928 O94766 O94766 51 59 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes yes 2 0.0040903 117.71 By MS/MS By matching 7 1.41 1 1 1 1 1 3 2 7745400 7701100 44334 7144 348 7406 17805;17806;17807;17808;17809 12622;12623 12622 2 219340 133340 ISQSNYIPTQQDVLR QLNDSASYYLNDLDRISQSNYIPTQQDVLR ISQSNYIPTQQDVLRTRVKTTGIVETHFTF R I S L R T 0 1 1 1 0 3 0 0 0 2 1 0 0 0 1 2 1 0 1 1 0 0 15 0 1760.9057 P08754 P08754 162 176 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 2 0.00091762 119.21 By MS/MS 8 0 1 1 1292100 1292100 0 7145 508 7407 17810 12624 12624 1 85239 0 ISQSQPVR QSQSSYIIRNPQQRRISQSQPVRGRDEEQD RNPQQRRISQSQPVRGRDEEQDDIVSADVE R I S V R G 0 1 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 8 0 913.49813 O95071 O95071 1548 1555 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0043405 139.97 By MS/MS 1.5 0.5 1 1 2 847950 847950 0 7146 364 7408 17811;17812 12625;12626 12625 2 41860 0 ISREECDKYALQSQQR LPMAMTAENLAVKHKISREECDKYALQSQQ SREECDKYALQSQQRWKAANDAGYFNDEMA K I S Q R W 1 2 0 1 1 3 2 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 16 2 2009.9589 P42765 P42765 174 189 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 3 0.041588 62.765 By MS/MS 7 0 1 1 1089800 1089800 0 7147 855 7409 17813 12627 12627 1 19474 0 ISSDQLSSEHLSSAVEQK GFGVTQETEFSIPHKISSDQLSSEHLSSAV DQLSSEHLSSAVEQKIASPNRILSDEKNYA K I S Q K I 1 0 0 1 0 2 2 0 1 1 2 1 0 0 0 6 0 0 0 1 0 0 18 0 1943.9436 A3KMH1 A3KMH1 1335 1352 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 3 0.017944 65.905 By MS/MS 2.5 0.5 1 1 2 2428900 2428900 0 7148 13 7410 17814;17815 12628;12629 12629 2 97513 0 ISSIQSIVPALEIANAHR KCEFQDAYVLLSEKKISSIQSIVPALEIAN IQSIVPALEIANAHRKPLVIIAEDVDGEAL K I S H R K 3 1 1 0 0 1 1 0 1 4 1 0 0 0 1 3 0 0 0 1 0 0 18 0 1918.0636 P10809 P10809 251 268 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 4.8894E-25 214.58 By MS/MS 5.67 0.471 1 2 3 111890000 111890000 0 7149 544 7411 17816;17817;17818 12630;12631;12632 12631 3 874960 0 ISSLLEEQFQQGK KKIQKKYDERKKNAKISSLLEEQFQQGKLL AKISSLLEEQFQQGKLLACIASRPGQCGRA K I S G K L 0 0 0 0 0 3 2 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1505.7726 P62241 P62241 158 170 RPS8 40S ribosomal protein S8 yes yes 2 8.0804E-73 375.75 By MS/MS By MS/MS 6.71 2.81 1 1 1 2 1 1 6 1 43791000 43584000 207500 7150 1118 7412 17819;17820;17821;17822;17823;17824;17825 12633;12634;12635;12636;12637;12638;12639;12640;12641 12640 9 6504100 1770200 ISSSKGSLGGGFSSGGFSGGSFSR GGGGCGGGGGVSSLRISSSKGSLGGGFSSG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY R I S S R G 0 1 0 0 0 0 0 8 0 1 1 1 0 3 0 9 0 0 0 0 0 0 24 1 2209.04 CON__P13645;P13645 CON__P13645 36 59 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.014319 53.865 By MS/MS 1 0 1 1 100250 0 100250 + 7151 49 7413 17826 12642 12642 1 0 100250 ISSTLYQAAAPVLTPAK TCFIFSMVGLYYINKISSTLYQAAAPVLTP STLYQAAAPVLTPAKVTGKSKKRN______ K I S A K V 4 0 0 0 0 1 0 0 0 1 2 1 0 0 2 2 2 0 1 1 0 0 17 0 1729.9614 Q8N6L1 Q8N6L1 111 127 KRTCAP2 Keratinocyte-associated protein 2 yes yes 2 1.377E-13 179.93 By MS/MS 10 0 1 1 383330 383330 0 7152 1929 7414 17827 12643 12643 1 407440 0 ISSVLAGGSCR GSCGIGGGIGGGSSRISSVLAGGSCRAPST GSSRISSVLAGGSCRAPSTYGGGLSVSSSR R I S C R A 1 1 0 0 1 0 0 2 0 1 1 0 0 0 0 3 0 0 0 1 0 0 11 0 1105.555 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 31 41 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.0001303 157.78 By MS/MS By MS/MS 5.38 2.93 2 1 2 2 2 1 1 2 1 2 7 9 12157000 8190900 3966200 + 7153 35;47 7415 17828;17829;17830;17831;17832;17833;17834;17835;17836;17837;17838;17839;17840;17841;17842;17843 12644;12645;12646;12647;12648;12649;12650;12651;12652;12653;12654;12655;12656;12657;12658;12659 12658 16 851210 13485000 ISTEVGITNVDLSTVDKDQSIAPK GDNRYIANTVELRVKISTEVGITNVDLSTV VDLSTVDKDQSIAPKTTRVTYPAKAKGTFI K I S P K T 1 0 1 3 0 1 1 1 0 3 1 2 0 0 1 3 3 0 0 3 0 0 24 1 2529.3174 P04844 P04844 369 392 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 3 0.010947 56.748 By MS/MS 6 0 1 1 4376600 4376600 0 7154 459 7416 17844 12660 12660 1 34129 0 ISTISSVR SDDVFSSSRHESVSKISTISSVRNLTIRSS RHESVSKISTISSVRNLTIRSSSFSDTLEE K I S V R N 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 1 0 0 1 0 0 8 0 861.49198 P15924 P15924 2593 2600 DSP Desmoplakin yes yes 2 0.02399 101.6 By MS/MS 2 0 1 1 374210 374210 0 7155 603 7417 17845 12661 12661 1 18600 0 ISTLPQLNSALVQDLAK HMTVKNKYATSKHAKISTLPQLNSALVQDL TLPQLNSALVQDLAKAVAKV__________ K I S A K A 2 0 1 1 0 2 0 0 0 1 4 1 0 0 1 2 1 0 0 1 0 0 17 0 1810.02 P14635 P14635 412 428 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 2 0.0086441 109.83 By MS/MS 6 0 1 1 2546700 2546700 0 7156 590 7418 17846 12662 12662 1 19859 0 ISTVVSSK ADNKCLLRATDGKKKISTVVSSKEVNKFQM ATDGKKKISTVVSSKEVNKFQMAYSNLLRA K I S S K E 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 3 1 0 0 2 0 0 8 0 819.47018 P37108 P37108 67 74 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.0072772 128.61 By MS/MS 10 0 1 1 1805300 1805300 0 7157 813 7419 17847 12663 12663 1 1918800 0 ISVAAASK LARQCRIYELRNKERISVAAASKLLANMVY ELRNKERISVAAASKLLANMVYQYKGMGLS R I S S K L 3 0 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 8 0 745.4334 P28074 P28074 133 140 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.0080258 125.81 By MS/MS 9.5 0.5 1 1 2 3399200 3399200 0 7158 715 7420 17848;17849 12664 12664 1 2003500 0 ISVATGALEAAQGSK DARRACAAGTPAVIRISVATGALEAAQGSK ISVATGALEAAQGSKSQCQTRQTSATSTTM R I S S K S 4 0 0 0 0 1 1 2 0 1 1 1 0 0 0 2 1 0 0 1 0 0 15 0 1401.7464 P51610 P51610 1149 1163 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 2 5.2948E-07 159.5 By MS/MS 3 0 1 1 551460 551460 0 7159 970 7421 17850 12665 12665 1 14396 0 ISVMGGEQAANVLATITK RAYSPRFLYIWPNARISVMGGEQAANVLAT MGGEQAANVLATITKDQRAREGKQFSSADE R I S T K D 3 0 1 0 0 1 1 2 0 2 1 1 1 0 0 1 2 0 0 2 0 0 18 0 1801.9608 Q9HCC0 Q9HCC0 470 487 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 7.6519E-56 285.81 By MS/MS 6 0 2 2 6603800 6603800 0 7160 2559 7422;7423 17851;17852 12666;12667 12667 1541 2 51497 0 ISVNDFIIK LVRKELNKILEGRSKISVNDFIIKASALAC LEGRSKISVNDFIIKASALACLKVPEANSS K I S I K A 0 0 1 1 0 0 0 0 0 3 0 1 0 1 0 1 0 0 0 1 0 0 9 0 1047.5964 P10515 P10515 474 482 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 2 0.0093626 110.41 By MS/MS 6 0.816 1 1 1 3 1991000 1991000 0 7161 538 7424 17853;17854;17855 12668 12668 1 65580 0 ISVYSIMGGSTDGLR PRNPAVLSAASFDGRISVYSIMGGSTDGLR ISVYSIMGGSTDGLRQKQVDKLSSSFGNLD R I S L R Q 0 1 0 1 0 0 0 3 0 2 1 0 1 0 0 3 1 0 1 1 0 0 15 0 1554.7712 O94979 O94979 328 342 SEC31A Protein transport protein Sec31A yes yes 2 0.00026361 127.37 By MS/MS 3.5 0.5 1 1 2 1142400 1142400 0 7162 362 7425 17856;17857 12669;12670 12670 192 2 30014 0 ISVYYNEATGGK PTGTYHGDSDLQLDRISVYYNEATGGKYVP LDRISVYYNEATGGKYVPRAILVDLEPGTM R I S G K Y 1 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 2 1 0 0 12 0 1300.6299 P07437 P07437 47 58 TUBB Tubulin beta chain yes yes 2 3.5302E-24 246.08 By MS/MS By MS/MS 6.75 2.11 1 1 2 1 1 1 1 7 1 1013200000 1011700000 1463400 7163 490 7426 17858;17859;17860;17861;17862;17863;17864;17865 12671;12672;12673;12674;12675;12676;12677;12678;12679;12680 12679 10 17056000 4488100 ISVYYNEATGGKYVPR PTGTYHGDSDLQLDRISVYYNEATGGKYVP SVYYNEATGGKYVPRAILVDLEPGTMDSVR R I S P R A 1 1 1 0 0 0 1 2 0 1 0 1 0 0 1 1 1 0 3 2 0 0 16 1 1815.9155 P07437 P07437 47 62 TUBB Tubulin beta chain yes yes 2 8.0864E-07 169.09 By MS/MS 6 0 1 1 25821000 25821000 0 7164 490 7427 17866 12681 12681 1 201350 0 ISYSLFTALR LYWVGAGTVAYLALRISYSLFTALRVWGVG YLALRISYSLFTALRVWGVGNEAGVGPGLG R I S L R V 1 1 0 0 0 0 0 0 0 1 2 0 0 1 0 2 1 0 1 0 0 0 10 0 1169.6445 Q53GQ0 Q53GQ0 26 35 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 3.1466E-05 173.39 By MS/MS 8 0 1 1 1224400 1224400 0 7165 1584 7428 17867 12682 12682 1 80770 0 ITAEEMYDIFGK PEVNRILYIRNLPYKITAEEMYDIFGKYGP PYKITAEEMYDIFGKYGPIRQIRVGNTPET K I T G K Y 1 0 0 1 0 0 2 1 0 2 0 1 1 1 0 0 1 0 1 0 0 0 12 0 1415.6643 Q9Y3B4 Q9Y3B4 30 41 SF3B6 Splicing factor 3B subunit 6 yes yes 2 0.010804 96.113 By MS/MS 10 0 2 2 214890 214890 0 7166 2925 7429;7430 17868;17869 12683;12684 12684 1682 2 228410 0 ITALEDISTEDGDR MGTLLNTAISEVIGKITALEDISTEDGDRL KITALEDISTEDGDRLYSLCKTVMDEGPQV K I T D R L 1 1 0 3 0 0 2 1 0 2 1 0 0 0 0 1 2 0 0 0 0 0 14 0 1533.7158 O43264 O43264 668 681 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 3.5387E-08 234.24 By MS/MS 4 0 1 1 2230700 2230700 0 7167 189 7431 17870 12685 12685 1 60897 0 ITAQSIEELCAVNLYGPDAQVDR MSPYKDILETHLREKITAQSIEELCAVNLY LCAVNLYGPDAQVDRSRLAAVVSACKQLHR K I T D R S 3 1 1 2 1 2 2 1 0 2 2 0 0 0 1 1 1 0 1 2 0 0 23 0 2561.2432 P78527 P78527 1423 1445 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 1.4175E-06 118.5 By MS/MS 1.67 0.471 1 2 3 646650 646650 0 7168 1197 7432 17871;17872;17873 12686;12687 12686 2 32113 0 ITCLCQVPQNAANR QTSAMLFTVDNEAGKITCLCQVPQNAANRG KITCLCQVPQNAANRGLKASEWVQQVSGLM K I T N R G 2 1 2 0 2 2 0 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 14 0 1643.7872 P49588 P49588 899 912 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 1.0944E-25 240.8 By MS/MS 4.5 0.5 1 1 2 1965500 1965500 0 7169 921 7433 17874;17875 12688 12688 1 56080 0 ITDAFSSLAK ESKVSKLVTDKAAGKITDAFSSLAKRSNFR KAAGKITDAFSSLAKRSNFRAISKKLNLIP K I T A K R 2 0 0 1 0 0 0 0 0 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1051.555 Q9H267 Q9H267 471 480 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 2 0.010439 99.013 By MS/MS 5 0 1 1 984160 984160 0 7170 2471 7434 17876 12689 12689 1 40453 0 ITDGTMLQAIER KEDVYRGPAIRALCRITDGTMLQAIERYMK LCRITDGTMLQAIERYMKQAIVDKVSSVSS R I T E R Y 1 1 0 1 0 1 1 1 0 2 1 0 1 0 0 0 2 0 0 0 0 0 12 0 1346.6864 Q9UBF2 Q9UBF2 131 142 COPG2 Coatomer subunit gamma-2 yes yes 2 2.7361E-17 231.07 By MS/MS 4.5 0.5 1 1 2 3276600 3276600 0 7171 2748 7435 17877;17878 12690;12691 12691 2 122600 0 ITDLLPNITR GSPESTKLQTLPVSRITDLLPNITRNGAFI LPVSRITDLLPNITRNGAFINWKEAKLTWS R I T T R N 0 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 2 0 0 0 0 0 10 0 1154.6659 Q96AA3 Q96AA3 221 230 RFT1 Protein RFT1 homolog yes yes 2 0.0053555 106.29 By MS/MS 2 0.816 1 1 1 3 858690 858690 0 7172 2120 7436 17879;17880;17881 12692;12693 12692 2 35855 0 ITDSAGHILYSK SDQSGGAGGLRSHLKITDSAGHILYSKEDA HLKITDSAGHILYSKEDATKGKFAFTTEDY K I T S K E 1 0 0 1 0 0 0 1 1 2 1 1 0 0 0 2 1 0 1 0 0 0 12 0 1303.6772 P49755 P49755 76 87 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 4.3334E-17 229.82 By MS/MS 9 0 1 1 1211900 1211900 0 7173 930 7437 17882 12694 12694 1 695510 0 ITDSAGHILYSKEDATK SDQSGGAGGLRSHLKITDSAGHILYSKEDA DSAGHILYSKEDATKGKFAFTTEDYDMFEV K I T T K G 2 0 0 2 0 0 1 1 1 2 1 2 0 0 0 2 2 0 1 0 0 0 17 1 1847.9265 P49755 P49755 76 92 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 3;4 0.0010481 114.27 By MS/MS 9 0 2 2 2173600 2173600 0 7174 930 7438 17883;17884 12695;12696 12695 2 1247400 0 ITDSPEEIVQK AKMSKSDPDKLATVRITDSPEEIVQKFRKA ATVRITDSPEEIVQKFRKAVTDFTSEVTYD R I T Q K F 0 0 0 1 0 1 2 0 0 2 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1257.6452 Q9UGM6 Q9UGM6 240 250 WARS2 Tryptophan--tRNA ligase, mitochondrial yes yes 2 0.037686 79.986 By MS/MS 6.5 0.5 1 1 2 5797400 5797400 0 7175 2773 7439 17885;17886 12697 12697 1 63223 0 ITDVALDFWR QKAMFIFLSNAGAERITDVALDFWRSGKQR AGAERITDVALDFWRSGKQREDIKLKDIEH R I T W R S 1 1 0 2 0 0 0 0 0 1 1 0 0 1 0 0 1 1 0 1 0 0 10 0 1234.6346 O14656 O14656 214 223 TOR1A Torsin-1A yes yes 2 0.00093084 126.07 By MS/MS 8 0 1 1 153290 153290 0 7176 119 7440 17887 12698 12698 1 10113 0 ITEAVATATEQR SNSDLSGRCAELQVRITEAVATATEQRELI QVRITEAVATATEQRELIARLEQDLSIIQS R I T Q R E 3 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 3 0 0 1 0 0 12 0 1288.6623 Q13948 Q13948 428 439 CUX1 Protein CASP yes yes 2 7.6444E-11 198.62 By MS/MS 5.5 0.5 1 1 2 2178900 2178900 0 7177 1403 7441 17888;17889 12699 12699 1 41190 0 ITELKEEIEVK EDQQKINKFARNTSRITELKEEIEVKKKQL NTSRITELKEEIEVKKKQLQNLEDACDDIM R I T V K K 0 0 0 0 0 0 4 0 0 2 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1329.7391 Q9NQP4 Q9NQP4 33 43 PFDN4 Prefoldin subunit 4 yes yes 3 0.046485 72.289 By MS/MS 10 0 1 1 1401200 1401200 0 7178 2591 7442 17890 12700 12700 1 1489300 0 ITELMQVLK LAGREMTRLAGFTARITELMQVLKDLNHGK AGFTARITELMQVLKDLNHGKYERTMVSQQ R I T L K D 0 0 0 0 0 1 1 0 0 1 2 1 1 0 0 0 1 0 0 1 0 0 9 0 1073.6155 P28288 P28288 391 399 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 3.6679E-06 182.53 By MS/MS 5 0 1 1 703740 703740 0 7179 716 7443 17891 12701 12701 1 28927 0 ITELTDENVK ______________________________ QPTVRITELTDENVKFIIENTDLAVANSIR R I T V K F 0 0 1 1 0 0 2 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 10 0 1160.5925 P19387 P19387 11 20 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 2 0.00022214 155.84 By MS/MS 8 0 1 1 1214100 1214100 0 7180 631 7444 17892 12702 12702 1 80095 0 ITENASDADLWLLNSCTVK DGEYMAGQLAAYGYKITENASDADLWLLNS ASDADLWLLNSCTVKNPAEDHFRNSIKKAQ K I T V K N 2 0 2 2 1 0 1 0 0 1 3 1 0 0 0 2 2 1 0 1 0 0 19 0 2149.0361 Q5VV42 Q5VV42 94 112 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 6.24E-56 276.59 By MS/MS 6 0 1 1 1238200 1238200 0 7181 1652 7445 17893 12703 12703 1 9655.2 0 ITEVQQK KTRYIGEVGDIVVGRITEVQQKRWKVETNS VGDIVVGRITEVQQKRWKVETNSRLDSVLL R I T Q K R 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 7 0 844.46543 Q13868 Q13868 88 94 EXOSC2 Exosome complex component RRP4 yes yes 2 0.039937 108.09 By MS/MS By matching 7.33 1.89 2 1 1 1 1 5 1 1159800 1140400 19407 7182 1399 7446 17894;17895;17896;17897;17898;17899 12704 12704 1 412380 57426 ITFADFHR VTDLFRAIDQEEKGKITFADFHRFAEMYPA DQEEKGKITFADFHRFAEMYPAFAEEYLYP K I T H R F 1 1 0 1 0 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 8 0 1005.5032 Q8NF37 Q8NF37 471 478 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.038372 95.909 By MS/MS 6 0 1 1 2249400 2249400 0 7183 1967 7447 17900 12705 12705 1 17541 0 ITFCTGIR GRILSKLHTVQPKGKITFCTGIRVAHLALK TVQPKGKITFCTGIRVAHLALKHRQGKNHK K I T I R V 0 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 2 0 0 0 0 0 8 0 966.49569 P55036 P55036 84 91 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2 0.01022 119.41 By MS/MS 6.5 0.5 1 1 2 2452200 2452200 0 7184 1023 7448 17901;17902 12706 12706 1 23731 0 ITFDAFPGEPDKELNPK IEILAPPNGSVPGDRITFDAFPGEPDKELN FDAFPGEPDKELNPKKKIWEQIQPDLHTND R I T P K K 1 0 1 2 0 0 2 1 0 1 1 2 0 2 3 0 1 0 0 0 0 0 17 1 1916.952 Q12904 Q12904 251 267 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2;3 8.85E-10 201.38 By MS/MS 7.5 0.5 2 2 4 7891100 7891100 0 7185 1313 7449 17903;17904;17905;17906 12707;12708;12709 12709 3 426170 0 ITFHGEGDQEPGLEPGDIIIVLDQK ILEVHIDKGMKDGQKITFHGEGDQEPGLEP PGLEPGDIIIVLDQKDHAVFTRRGEDLFMC K I T Q K D 0 0 0 3 0 2 3 4 1 4 2 1 0 1 2 0 1 0 0 1 0 0 25 0 2719.3705 P31689 P31689 222 246 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 3 1.842E-07 115.5 By MS/MS 6 0 1 1 6053000 6053000 0 7186 755 7450 17907 12710 12710 1 47201 0 ITFLLQAIR KQAEETYENIPGQSKITFLLQAIRNTTAAE IPGQSKITFLLQAIRNTTAAEEARQMAAVL K I T I R N 1 1 0 0 0 1 0 0 0 2 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1073.6597 O00410 O00410 42 50 IPO5 Importin-5 yes yes 2 2.4392E-06 187 By MS/MS 5 1 1 1 2 763250 763250 0 7187 91 7451 17908;17909 12711;12712 12711 2 10871 0 ITFPSSQQEAQNR PVAFHVLFASSHTPRITFPSSQQEAQNRMS PRITFPSSQQEAQNRMSQMRNLIQTLVSGI R I T N R M 1 1 1 0 0 3 1 0 0 1 0 0 0 1 1 2 1 0 0 0 0 0 13 0 1504.727 Q8WVB6 Q8WVB6 717 729 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.00018388 150.09 By MS/MS 3.5 0.5 1 1 2 1067500 1067500 0 7188 2027 7452 17910;17911 12713 12713 1 28899 0 ITFTGEADQAPGVEPGDIVLLLQEK ILEVHVDKGMKHGQRITFTGEADQAPGVEP PGVEPGDIVLLLQEKEHEVFQRDGNDLHMT R I T E K E 2 0 0 2 0 2 3 3 0 2 3 1 0 1 2 0 2 0 0 2 0 0 25 0 2639.3694 O60884 O60884 231 255 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 3 0.00077458 74.627 By MS/MS 6 0 1 1 296240 296240 0 7189 273 7453 17912 12714 12714 1 2310.1 0 ITGCASPGK LAEEVNLNGSGKLLKITGCASPGKTVTIVV SGKLLKITGCASPGKTVTIVVRGSNKLVIE K I T G K T 1 0 0 0 1 0 0 2 0 1 0 1 0 0 1 1 1 0 0 0 0 0 9 0 889.43275 P50991 P50991 376 384 CCT4 T-complex protein 1 subunit delta yes yes 2 0.001869 131.22 By MS/MS 9 0.816 1 1 1 3 1885400 1885400 0 7190 956 7454 17913;17914;17915 12715 12715 1 228500 0 ITGEAFVQFASQELAEK IVPNGITLPVDPEGKITGEAFVQFASQELA GEAFVQFASQELAEKALGKHKERIGHRYIE K I T E K A 3 0 0 0 0 2 3 1 0 1 1 1 0 2 0 1 1 0 0 1 0 0 17 0 1866.9363 P52597 P52597 151 167 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 2 1.2015E-14 194.23 By MS/MS 6 0 1 1 899000 899000 0 7191 988 7455 17916 12716 12716 1 7010.4 0 ITGLSPGR KSEEPEVPDQEGLQRITGLSPGRSALIVAV DQEGLQRITGLSPGRSALIVAVLCYINLLN R I T G R S 0 1 0 0 0 0 0 2 0 1 1 0 0 0 1 1 1 0 0 0 0 0 8 0 799.4552 Q9H2V7 Q9H2V7 50 57 SPNS1 Protein spinster homolog 1 yes yes 2 0.008849 122.74 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 1389400 1372700 16633 7192 2484 7456 17917;17918;17919;17920;17921 12717;12718 12718 2 54312 16633 ITGTKEGIEK KIQIPRPDDPSNQIKITGTKEGIEKARHEV SNQIKITGTKEGIEKARHEVLLISAEQDKR K I T E K A 0 0 0 0 0 0 2 2 0 2 0 2 0 0 0 0 2 0 0 0 0 0 10 1 1074.5921 Q00341 Q00341 198 207 HDLBP Vigilin yes yes 2 0.0019869 154.01 By MS/MS 3 0 1 1 501860 501860 0 7193 1231 7457 17922 12719 12719 1 13101 0 ITIADCGQLE AMERFGSRNGKTSKKITIADCGQLE_____ KTSKKITIADCGQLE_______________ K I T L E - 1 0 0 1 1 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1118.5278 P62937 P62937 156 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.00022877 155.58 By MS/MS 10 0 1 1 920620 920620 0 7194 1163 7458 17923 12720 12720 1 978520 0 ITIGQAPTEK TWQRVLDTNDRFLRKITIGQAPTEKGHTRT RFLRKITIGQAPTEKGHTRTAQFDISVASE K I T E K G 1 0 0 0 0 1 1 1 0 2 0 1 0 0 1 0 2 0 0 0 0 0 10 0 1056.5815 P11586 P11586 544 553 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0027344 114.86 By MS/MS 4 0 1 1 4423300 4423300 0 7195 556 7459 17924 12721 12721 1 120750 0 ITITNDKGR LNVSAVDKSTGKENKITITNDKGRLSKEDI TGKENKITITNDKGRLSKEDIERMVQEAEK K I T G R L 0 1 1 1 0 0 0 1 0 2 0 1 0 0 0 0 2 0 0 0 0 0 9 1 1016.5615 P11142;P54652;P0DMV9;P0DMV8;P17066 P11142 501 509 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2;3 0.0014382 164.46 By MS/MS By matching 5.8 0.748 2 2 1 4 1 56369000 56356000 12513 7196 546;528;611 7460 17925;17926;17927;17928;17929 12722;12723;12724 12723 3 2229000 38376 ITITNDQNR LRVTAEDKGTGNKNKITITNDQNRLTPEEI TGNKNKITITNDQNRLTPEEIERMVNDAEK K I T N R L 0 1 2 1 0 1 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 9 0 1073.5465 P11021 P11021 524 532 HSPA5 78 kDa glucose-regulated protein yes yes 2 1.0469E-05 176.44 By MS/MS By MS/MS 5 0 2 1 1 21910000 21738000 172690 7197 545 7461 17930;17931 12725;12726 12726 2 893510 510980 ITKEPIIDYFDVQD RHQSDKNPGSSNLQKITKEPIIDYFDVQD_ KITKEPIIDYFDVQD_______________ K I T Q D - 0 0 0 3 0 1 1 0 0 3 0 1 0 1 1 0 1 0 1 1 0 0 14 1 1694.8403 Q12986 Q12986 1107 1120 NFX1 Transcriptional repressor NF-X1 yes yes 2 0.0059974 127.02 By MS/MS 4 0 1 1 208310 208310 0 7198 1322 7462 17932 12727 12727 1 5686.7 0 ITKPDGIVEER QPQPKSYFKSISVTKITKPDGIVEERRTVV SVTKITKPDGIVEERRTVVDSEGRTETTVT K I T E R R 0 1 0 1 0 0 2 1 0 2 0 1 0 0 1 0 1 0 0 1 0 0 11 1 1255.6772 O00165 O00165 216 226 HAX1 HCLS1-associated protein X-1 yes yes 3 0.006939 103.21 By MS/MS 8.33 1.25 1 1 1 3 7145800 7145800 0 7199 73 7463 17933;17934;17935 12728;12729 12728 2 641590 0 ITKPGSIDSNNQLFAPGGR ISKGSRPIDTSRLTKITKPGSIDSNNQLFA GSIDSNNQLFAPGGRLSWGKGSSGGSGAKP K I T G R L 1 1 2 1 0 1 0 3 0 2 1 1 0 1 2 2 1 0 0 0 0 0 19 1 1971.0174 Q04637 Q04637 1072 1090 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 6.4159E-05 137.93 By MS/MS 3 1.22 1 2 2 2 1 8 17587000 17587000 0 7200 1264 7464 17936;17937;17938;17939;17940;17941;17942;17943 12730;12731;12732;12733;12734;12735;12736 12734 7 706080 0 ITLVSAAPGK KAMTKARNFERVLGKITLVSAAPGKVICEM RVLGKITLVSAAPGKVICEMKVEEEHTNAI K I T G K V 2 0 0 0 0 0 0 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 955.57023 Q9NPJ3 Q9NPJ3 28 37 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 2 0.0010115 122.33 By MS/MS 10 0 1 1 331170 331170 0 7201 2582 7465 17944 12737 12737 1 352000 0 ITMIAEPLEK SSLKCFAETPNKKNKITMIAEPLEKGLAED NKKNKITMIAEPLEKGLAEDIENEVVQITW K I T E K G 1 0 0 0 0 0 2 0 0 2 1 1 1 0 1 0 1 0 0 0 0 0 10 0 1143.6209 Q15029 Q15029 685 694 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.0033502 126.07 By MS/MS 3.5 0.5 1 1 2 1225600 1225600 0 7202 1466 7466 17945;17946 12738 12738 1 33257 0 ITMSAPGMILLPVIMER RRAAAIGITQVVISRITMSAPGMILLPVIM MSAPGMILLPVIMERLEKLHFMQKVKVLHA R I T E R L 1 1 0 0 0 0 1 1 0 3 2 0 3 0 2 1 1 0 0 1 0 0 17 0 1871.0083 Q96NB2 Q96NB2 233 249 SFXN2 Sideroflexin-2 yes yes 2;3 2.0418E-07 148.62 By MS/MS 8 0 2 2 1283400 1283400 0 7203 2231 7467 17947;17948 12739;12740 12739 1414;1415;1416 2 84666 0 ITNDFYPEEDGK KLKNVIHKIFSKFGKITNDFYPEEDGKTKG FGKITNDFYPEEDGKTKGYIFLEYASPAHA K I T G K T 0 0 1 2 0 0 2 1 0 1 0 1 0 1 1 0 1 0 1 0 0 0 12 0 1426.6252 P55884 P55884 217 228 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 3.0779E-07 186.46 By MS/MS By matching 3.67 1.7 1 1 2 1 1 5 1 6396300 6263800 132520 7204 1040 7468 17949;17950;17951;17952;17953;17954 12741;12742;12743 12742 3 172940 276910 ITNDFYPEEDGKTK KLKNVIHKIFSKFGKITNDFYPEEDGKTKG KITNDFYPEEDGKTKGYIFLEYASPAHAVD K I T T K G 0 0 1 2 0 0 2 1 0 1 0 2 0 1 1 0 2 0 1 0 0 0 14 1 1655.7679 P55884 P55884 217 230 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 3.7594E-07 185.57 By MS/MS 5 0.816 1 1 1 3 2075400 2075400 0 7205 1040 7469 17955;17956;17957 12744 12744 1 49513 0 ITNHPSNK PVRQTASIFKQPVTKITNHPSNKVKSDPQK FKQPVTKITNHPSNKVKSDPQKAVDQPRQL K I T N K V 0 0 2 0 0 0 0 0 1 1 0 1 0 0 1 1 1 0 0 0 0 0 8 0 909.46683 O95983 O95983 115 122 MBD3 Methyl-CpG-binding domain protein 3 yes yes 2 0.027331 99.136 By MS/MS 8 0 1 1 210620 210620 0 7206 416 7470 17958 12745 12745 1 13894 0 ITNLTQQLEQASIVK ELEGMRRSLKEQAIKITNLTQQLEQASIVK ITNLTQQLEQASIVKKRSEDDLRQQRDVLD K I T V K K 1 0 1 0 0 3 1 0 0 2 2 1 0 0 0 1 2 0 0 1 0 0 15 0 1684.9359 P15924 P15924 1612 1626 DSP Desmoplakin yes yes 2 8.7627E-10 181.76 By MS/MS 2.5 0.5 1 1 2 255990 255990 0 7207 603 7471 17959;17960 12746 12746 1 10368 0 ITNQVHGLK LRDIKDTTVGTLSQRITNQVHGLKGLNSKL GTLSQRITNQVHGLKGLNSKLLDIRSYLEK R I T L K G 0 0 1 0 0 1 0 1 1 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1008.5716 P51665 P51665 191 199 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2;3 0.0016829 123.35 By MS/MS 7 0 2 2 4756700 4756700 0 7208 975 7472 17961;17962 12747;12748 12747 2 85004 0 ITNQVIYLNPPIEECR PGGEPKIKNVVHELRITNQVIYLNPPIEEC TNQVIYLNPPIEECRYKLYQEMFAWKMVVL R I T C R Y 0 1 2 0 1 1 2 0 0 3 1 0 0 0 2 0 1 0 1 1 0 0 16 0 1957.9931 Q14204 Q14204 964 979 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.009758 99.669 By MS/MS 2 0.816 1 1 1 3 643270 643270 0 7209 1421 7473 17963;17964;17965 12749;12750 12749 2 28693 0 ITNSLTVLCSEK VRDVCISLEIDDLKKITNSLTVLCSEKQKQ LKKITNSLTVLCSEKQKQEKQSKAKKKKKG K I T E K Q 0 0 1 0 1 0 1 0 0 1 2 1 0 0 0 2 2 0 0 1 0 0 12 0 1363.7017 O75822 O75822 199 210 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 2 0.00014002 155.47 By MS/MS 8 0 1 1 1257300 1257300 0 7210 331 7474 17966 12751 12751 1 82947 0 ITPAHDQNDYEVGQR FDEFVDMDFGTGAVKITPAHDQNDYEVGQR ITPAHDQNDYEVGQRHGLEAISIMDSRGAL K I T Q R H 1 1 1 2 0 2 1 1 1 1 0 0 0 0 1 0 1 0 1 1 0 0 15 0 1741.802 P26640 P26640 592 606 VARS Valine--tRNA ligase yes yes 3 0.0056755 94.461 By MS/MS 4 0.816 1 1 1 3 4147200 4147200 0 7211 699 7475 17967;17968;17969 12752;12753 12752 2 115290 0 ITPLEIEVLEETVQTMDTS RYRCEKGTTAVLTEKITPLEIEVLEETVQT EIEVLEETVQTMDTS_______________ K I T T S - 0 0 0 1 0 1 4 0 0 2 2 0 1 0 1 1 4 0 0 2 0 0 19 0 2147.0555 Q99436 Q99436 259 277 PSMB7 Proteasome subunit beta type-7 yes yes 2 0.029069 61.423 By MS/MS 9 0 1 1 213120 213120 0 7212 2265 7476 17970 12754 12754 1423 1 122310 0 ITPSYVAFTPEGER KNGRVEIIANDQGNRITPSYVAFTPEGERL RITPSYVAFTPEGERLIGDAAKNQLTSNPE R I T E R L 1 1 0 0 0 0 2 1 0 1 0 0 0 1 2 1 2 0 1 1 0 0 14 0 1565.7726 P11021 P11021 61 74 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 8.3616E-06 169.82 By MS/MS By MS/MS 6.2 2.14 1 1 3 1 1 1 1 1 9 1 72516000 72357000 159810 7213 545 7477 17971;17972;17973;17974;17975;17976;17977;17978;17979;17980 12755;12756;12757;12758;12759;12760;12761;12762 12757 8 3529000 472870 ITQDIFQQLLK SFDIFGRTTTPQQTKITQDIFQQLLKRGFV QQTKITQDIFQQLLKRGFVLQDTVEQLRCE K I T L K R 0 0 0 1 0 3 0 0 0 2 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1345.7606 P56192 P56192 365 375 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 2.1403E-22 246.63 By MS/MS 4.5 0.5 1 1 2 1489600 1489600 0 7214 1042 7478 17981;17982 12763 12763 1 41246 0 ITQLCLAAIQR VVQPFLMGCGTKEPKITQLCLAAIQRLMSH KEPKITQLCLAAIQRLMSHEVVSETAAGNI K I T Q R L 2 1 0 0 1 2 0 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1285.7176 Q7Z3U7 Q7Z3U7 82 92 MON2 Protein MON2 homolog yes yes 2 1.6791E-07 192.64 By MS/MS 4 0.816 1 1 1 3 1386400 1386400 0 7215 1786 7479 17983;17984;17985 12764 12764 1 37787 0 ITQLLSGEQNEQVK YLMLMGSPSQSDISKITQLLSGEQNEQVKN KITQLLSGEQNEQVKNFVASHIANILNSED K I T V K N 0 0 1 0 0 3 2 1 0 1 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1585.8312 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 574 587 yes yes 2 7.3451E-95 328.26 By MS/MS 2.75 1.48 1 1 1 1 4 901390 901390 0 + 7216 31 7480 17986;17987;17988;17989 12765;12766 12766 2 34187 0 ITREEGVLTLWR DQRRGYKNVFNALIRITREEGVLTLWRGCI LIRITREEGVLTLWRGCIPTMARAVVVNAA R I T W R G 0 2 0 0 0 0 2 1 0 1 2 0 0 0 0 0 2 1 0 1 0 0 12 1 1471.8147 Q02978 Q02978 171 182 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2;3 0.0033472 130.1 By MS/MS 8 0 2 2 7778900 7778900 0 7217 1260 7481 17990;17991 12767;12768 12767 2 513170 0 ITSASSQTLR GLRVRAQPGDYVLVKITSASSQTLRGHVLC YVLVKITSASSQTLRGHVLCRTTLRDSSAY K I T L R G 1 1 0 0 0 1 0 0 0 1 1 0 0 0 0 3 2 0 0 0 0 0 10 0 1062.5669 Q96SZ6 Q96SZ6 576 585 CDK5RAP1 CDK5 regulatory subunit-associated protein 1 yes yes 2 0.0007548 134.23 By MS/MS 6.5 0.5 1 1 2 4571100 4571100 0 7218 2258 7482 17992;17993 12769 12769 1 40234 0 ITSDEPLTKDDIPVFLR NNQERVTLLDLMIAKITSDEPLTKDDIPVF SDEPLTKDDIPVFLRHAELIASTFVDQCKT K I T L R H 0 1 0 3 0 0 1 0 0 2 2 1 0 1 2 1 2 0 0 1 0 0 17 1 1958.0361 Q9UBB4 Q9UBB4 254 270 ATXN10 Ataxin-10 yes yes 2;3 0.0028284 124.48 By MS/MS 7 0 2 2 3563000 3563000 0 7219 2744 7483 17994;17995 12770;12771 12771 2 63672 0 ITSEAIGQLHR YRGHTNQDHVHAVWKITSEAIGQLHRSLES AVWKITSEAIGQLHRSLESCPGETVVAEDP K I T H R S 1 1 0 0 0 1 1 1 1 2 1 0 0 0 0 1 1 0 0 0 0 0 11 0 1223.6622 Q9UNY4 Q9UNY4 538 548 TTF2 Transcription termination factor 2 yes yes 3 0.012477 89.171 By MS/MS 3 0 1 1 517780 517780 0 7220 2848 7484 17996 12772 12772 1 13517 0 ITSEALLVTQQLVK LVPPVVACVGDPFYKITSEALLVTQQLVKV KITSEALLVTQQLVKVIRPLDQPSSFDATP K I T V K V 1 0 0 0 0 2 1 0 0 1 3 1 0 0 0 1 2 0 0 2 0 0 14 0 1541.9029 Q86VP6 Q86VP6 535 548 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2;3 1.0156E-12 211.63 By MS/MS 3.8 0.748 2 2 1 5 8191700 8191700 0 7221 1829 7485 17997;17998;17999;18000;18001 12773;12774;12775;12776 12775 4 222790 0 ITSEMGSASQANIR PYLEGILSQVIHLEKITSEMGSASQANIRL KITSEMGSASQANIRLTSLKKTLATTLAPR K I T I R L 2 1 1 0 0 1 1 1 0 2 0 0 1 0 0 3 1 0 0 0 0 0 14 0 1463.7038 Q9H583 Q9H583 1792 1805 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.012439 82.505 By MS/MS 2 0 1 1 137220 137220 0 7222 2503 7486 18002 12777 12777 1524 1 6820.4 0 ITSFVIPEPSPTSQTIQEGSR KGVESIVAVDWKHPRITSFVIPEPSPTSQT PEPSPTSQTIQEGSREQPYHPPDIKPLYCV R I T S R E 0 1 0 0 0 2 2 1 0 3 0 0 0 1 3 4 3 0 0 1 0 0 21 0 2273.1539 P41214 P41214 352 372 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.001079 93.424 By MS/MS 5 0 1 1 684370 684370 0 7223 837 7487 18003 12778 12778 1 28131 0 ITSGPFEPDLYK QFKFTVLLMPNGPMRITSGPFEPDLYKSEM PMRITSGPFEPDLYKSEMEVQDAELKALLQ R I T Y K S 0 0 0 1 0 0 1 1 0 1 1 1 0 1 2 1 1 0 1 0 0 0 12 0 1365.6816 Q9UQ80 Q9UQ80 333 344 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.014975 91.469 By MS/MS 7 0 1 1 2039800 2039800 0 7224 2859 7488 18004 12779 12779 1 36452 0 ITSPLMEPSSIEK GIQTSEGVCLAVEKRITSPLMEPSSIEKIV KRITSPLMEPSSIEKIVEIDAHIGCAMSGL R I T E K I 0 0 0 0 0 0 2 0 0 2 1 1 1 0 2 3 1 0 0 0 0 0 13 0 1430.7327 P28066 P28066 54 66 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.00088056 127.83 By MS/MS 8.75 0.829 2 1 1 4 3060200 3060200 0 7225 712 7489;7490 18005;18006;18007;18008 12780;12781 12780 489 2 317170 0 ITTGAQDDLR MTLGGRVSEEIFFGRITTGAQDDLRKVTQS IFFGRITTGAQDDLRKVTQSAYAQIVQFGM R I T L R K 1 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1088.5462 Q9Y4W6 Q9Y4W6 642 651 AFG3L2 AFG3-like protein 2 yes yes 2 0.01022 101.38 By MS/MS 5 0 1 1 0 0 0 7226 2960 7491 18009 12782 12782 1 0 0 ITTMQLER RIKDMDLWEQQEEERITTMQLEREKALEHK EQQEEERITTMQLEREKALEHKNRMSRMLE R I T E R E 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 0 2 0 0 0 0 0 8 0 990.51682 Q14152 Q14152 733 740 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0012306 169.12 By MS/MS By matching 2.4 0.49 3 2 4 1 4948600 4940400 8150.9 7227 1409 7492;7493 18010;18011;18012;18013;18014 12783;12784 12784 1085 2 135680 6862.3 ITVLEALR EARLGKPSLVRETSRITVLEALRHPIQVSR LVRETSRITVLEALRHPIQVSRRLLSRPQD R I T L R H 1 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 8 0 913.55967 Q5T9A4;Q9NVI7 Q9NVI7 339 346 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.00053152 182.68 By MS/MS 5 1.41 1 1 1 1 1 5 21187000 21187000 0 7228 2655;1634 7494 18015;18016;18017;18018;18019 12785;12786;12787;12788 12787 4 459260 0 ITVLEALRHPIQVSR EARLGKPSLVRETSRITVLEALRHPIQVSR ITVLEALRHPIQVSRRLLSRPQDALEGVVL R I T S R R 1 2 0 0 0 1 1 0 1 2 2 0 0 0 1 1 1 0 0 2 0 0 15 1 1731.0155 Q5T9A4;Q9NVI7 Q9NVI7 339 353 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.0086725 81.327 By MS/MS 6 0 1 1 2849200 2849200 0 7229 2655;1634 7495 18020 12789 12789 1 22218 0 ITVNEVELLVMK NHRQLTFEEIAKSAKITVNEVELLVMKALS SAKITVNEVELLVMKALSVGLVKGSIDEVD K I T M K A 0 0 1 0 0 0 2 0 0 1 2 1 1 0 0 0 1 0 0 3 0 0 12 0 1386.7792 Q9UNM6 Q9UNM6 302 313 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 5.859E-33 254.53 By MS/MS 7.33 0.471 2 1 3 5735600 5735600 0 7230 2845 7496;7497 18021;18022;18023 12790;12791 12790 1635 2 110440 0 ITVPDTYEAR HKDQPYYDIPDAPYRITVPDTYEARESIVK DAPYRITVPDTYEARESIVKDFAARCGMIL R I T A R E 1 1 0 1 0 0 1 0 0 1 0 0 0 0 1 0 2 0 1 1 0 0 10 0 1163.5823 P42356 P42356 1041 1050 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.021742 94.309 By MS/MS 2 0 1 1 0 0 0 7231 850 7498 18024 12792 12792 1 0 0 ITVTSEVPFSK NLGGGVVTIERSKSKITVTSEVPFSKRYLK SKSKITVTSEVPFSKRYLKYLTKKYLKKNN K I T S K R 0 0 0 0 0 0 1 0 0 1 0 1 0 1 1 2 2 0 0 2 0 0 11 0 1206.6496 P35268 P35268 70 80 RPL22 60S ribosomal protein L22 yes yes 2 4.7521E-05 169.76 By MS/MS 10 0 1 1 948580 948580 0 7232 788 7499 18025 12793 12793 1 1008200 0 IVADKDYSVTANSK MMDLQHGSLFLQTPKIVADKDYSVTANSKI KIVADKDYSVTANSKIVVVTAGVRQQEGES K I V S K I 2 0 1 2 0 0 0 0 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1509.7675 P07195 P07195 78 91 LDHB L-lactate dehydrogenase B chain yes yes 2;3 4.2432E-17 243.37 By MS/MS 8.4 1.02 1 2 1 1 5 14595000 14595000 0 7233 486 7500 18026;18027;18028;18029;18030 12794;12795 12794 2 1430600 0 IVAEEFLK KEISEMKLSVNARARIVAEEFLKNF_____ SVNARARIVAEEFLKNF_____________ R I V L K N 1 0 0 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 0 947.53278 P59998 P59998 159 166 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.021852 104.37 By MS/MS 9.5 0.5 1 1 2 1897400 1897400 0 7234 1062 7501 18031;18032 12796 12796 1 1249400 0 IVAERPGTNSTGPAPMAPPR WDLNAWTKSAEAFGKIVAERPGTNSTGPAP PGTNSTGPAPMAPPRAPGPLSKQGSGSSQP K I V P R A 3 2 1 0 0 0 1 2 0 1 0 0 1 0 5 1 2 0 0 1 0 0 20 1 2018.0367 Q13263 Q13263 408 427 TRIM28 Transcription intermediary factor 1-beta yes yes 3 0.00057283 99.413 By MS/MS 3.83 1.07 1 1 2 2 6 3673400 3673400 0 7235 1351 7502;7503 18033;18034;18035;18036;18037;18038 12797;12798 12798 1058 2 112350 0 IVAFENAFER LLLQALTRSNGAIQKIVAFENAFERLLDII GAIQKIVAFENAFERLLDIISEEGNSDGGI K I V E R L 2 1 1 0 0 0 2 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 10 0 1194.6033 O60763 O60763 203 212 USO1 General vesicular transport factor p115 yes yes 2 0.00010006 175.93 By MS/MS 4 0 1 1 3097200 3097200 0 7236 264 7504 18039 12799 12799 1 84551 0 IVAISCAADILK QAVLKECSKENVKYKIVAISCAADILKATK KYKIVAISCAADILKATKEDRFQEFSNIVI K I V L K A 3 0 0 1 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 1 0 0 12 0 1272.7112 Q5VYK3 Q5VYK3 1633 1644 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 4.4269E-07 182.46 By MS/MS 2.67 0.471 1 2 3 3476300 3476300 0 7237 1657 7505 18040;18041;18042 12800;12801;12802 12801 3 94041 0 IVALSSSLSNAK SRMRYISSQIERPIRIVALSSSLSNAKDVA PIRIVALSSSLSNAKDVAHWLGCSATSTFN R I V A K D 2 0 1 0 0 0 0 0 0 1 2 1 0 0 0 4 0 0 0 1 0 0 12 0 1188.6714 O75643 O75643 1487 1498 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 3.1738E-05 169.99 By MS/MS 2 0.816 1 1 1 3 2115300 2115300 0 7238 322 7506 18043;18044;18045 12803;12804 12804 2 97781 0 IVANSANVNGR TLVENGEMILADGRRIVANSANVNGRENVV DGRRIVANSANVNGRENVVVIHPDFRMIVL R I V G R E 2 1 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 11 0 1113.5891 A3KMH1 A3KMH1 877 887 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 5.5362E-16 218.58 By MS/MS 2 0 1 1 506360 506360 0 7239 13 7507 18046 12805 12805 1 25169 0 IVAPGKGILAADESTGSIAK LTPEQKKELSDIAHRIVAPGKGILAADEST KGILAADESTGSIAKRLQSIGTENTEENRR R I V A K R 4 0 0 1 0 0 1 3 0 3 1 2 0 0 1 2 1 0 0 1 0 0 20 1 1897.052 P04075 P04075 23 42 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.00075212 95.666 By MS/MS 7.5 0.5 1 1 2 4234700 4234700 0 7240 444 7508 18047;18048 12806 12806 1 161880 0 IVAVTGAEAQK FVIVTEEAIAKGIRRIVAVTGAEAQKALRK GIRRIVAVTGAEAQKALRKAESLKKCLSVM R I V Q K A 3 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1085.6081 P49588 P49588 752 762 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.011884 96.665 By MS/MS 5 0.816 1 1 1 3 5251100 5251100 0 7241 921 7509 18049;18050;18051 12807 12807 1 133500 0 IVCTPGQGLGDLR YCRIFTELCETFLEKIVCTPGQGLGDLRTL EKIVCTPGQGLGDLRTLELLLICAGHPQYE K I V L R T 0 1 0 1 1 1 0 3 0 1 2 0 0 0 1 0 1 0 0 1 0 0 13 0 1384.7133 Q9Y5L0 Q9Y5L0 310 322 TNPO3 Transportin-3 yes yes 2 0.0027068 115.92 By MS/MS 4.5 0.5 1 1 2 4764400 4764400 0 7242 2974 7510 18052;18053 12808 12808 1 141040 0 IVDDLKDEAEQYRK VELANKVGAAEIISRIVDDLKDEAEQYRKM RIVDDLKDEAEQYRKMVMETIEKIMGNLGA R I V R K M 1 1 0 3 0 1 2 0 0 1 1 2 0 0 0 0 0 0 1 1 0 0 14 2 1720.8632 O75533 O75533 853 866 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0085758 107.37 By MS/MS 3.5 0.5 1 1 2 3455100 3455100 0 7243 315 7511 18054;18055 12809 12809 1 90379 0 IVDDWANDGWGLK SDIFFDNFIICADRRIVDDWANDGWGLKKA RRIVDDWANDGWGLKKAADGAAEPGVVGQM R I V L K K 1 0 1 3 0 0 0 2 0 1 1 1 0 0 0 0 0 2 0 1 0 0 13 0 1487.7045 P27824 P27824 446 458 CANX Calnexin yes yes 2 4.4556E-05 185.3 By MS/MS 4 0 1 1 1375000 1375000 0 7244 711 7512 18056 12810 12810 1 37535 0 IVDGPDPENIILILK KVNKAYEFLCTKSAKIVDGPDPENIILILK IVDGPDPENIILILKTQSILFNRHKEDLQP K I V L K T 0 0 1 2 0 0 1 1 0 4 2 1 0 0 2 0 0 0 0 1 0 0 15 0 1647.9447 O75165 O75165 1360 1374 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.8257E-05 139.76 By MS/MS 3 0.816 1 1 1 3 476820 476820 0 7245 287 7513 18057;18058;18059 12811;12812;12813;12814 12812 4 19566 0 IVDNLGASGNSLYQR HRPKEAVLSCSQALKIVDNLGASGNSLYQR IVDNLGASGNSLYQRNLCLHLKAEALIKLS K I V Q R N 1 1 2 1 0 1 0 2 0 1 2 0 0 0 0 2 0 0 1 1 0 0 15 0 1605.8111 Q6PGP7 Q6PGP7 335 349 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 2.5707E-28 251.91 By MS/MS 3.5 0.5 1 1 2 2494100 2494100 0 7246 1714 7514 18060;18061 12815 12815 1 65221 0 IVEANPLLEAFGNAK YLTESYGTGQDIDDRIVEANPLLEAFGNAK IVEANPLLEAFGNAKTVRNNNSSRFGKFVE R I V A K T 3 0 2 0 0 0 2 1 0 1 2 1 0 1 1 0 0 0 0 1 0 0 15 0 1584.8512 Q9UM54 Q9UM54 182 196 MYO6 Unconventional myosin-VI yes yes 2 5.3442E-05 157.56 By MS/MS 4 0.816 1 1 1 3 1181700 1181700 0 7247 2833 7515 18062;18063;18064 12816;12817 12816 2 31814 0 IVEDAPPIDLQAEAQHASGEVEEPPR QLDSFDEFIQMSVQRIVEDAPPIDLQAEAQ AEAQHASGEVEEPPRYLLKFEQIYLSKPTH R I V P R Y 4 1 0 2 0 2 5 1 1 2 1 0 0 0 4 1 0 0 0 2 0 0 26 0 2796.3566 P30876 P30876 58 83 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.024037 43.523 By MS/MS 3 0 1 1 995110 995110 0 7248 748 7516 18065 12818 12818 1 25977 0 IVEDDASISSCNK PLEDTLLGKEKSTNRIVEDDASISSCNKLI NRIVEDDASISSCNKLITSDKVENFHEEHE R I V N K L 1 0 1 2 1 0 1 0 0 2 0 1 0 0 0 3 0 0 0 1 0 0 13 0 1436.6453 Q7Z5K2 Q7Z5K2 150 162 WAPAL Wings apart-like protein homolog yes yes 2 8.43E-05 156.01 By MS/MS 3 0 1 1 632640 632640 0 7249 1800 7517 18066 12819 12819 1 16515 0 IVEDEPNKICEADR CASVTFKNYIKRNWRIVEDEPNKICEADRV RIVEDEPNKICEADRVAIKANIVHLMLSSP R I V D R V 1 1 1 2 1 0 3 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 14 1 1686.7883 P55060 P55060 76 89 CSE1L Exportin-2 yes yes 2;3 1.7192E-07 190.66 By MS/MS By matching 4.25 0.433 3 1 3 1 5131600 5103000 28621 7250 1025 7518 18067;18068;18069;18070 12820;12821 12821 2 142900 59806 IVEDEPNKICEADRVAIK CASVTFKNYIKRNWRIVEDEPNKICEADRV DEPNKICEADRVAIKANIVHLMLSSPEQIQ R I V I K A 2 1 1 2 1 0 3 0 0 3 0 2 0 0 1 0 0 0 0 2 0 0 18 2 2098.0729 P55060 P55060 76 93 CSE1L Exportin-2 yes yes 3 0.0016575 109.54 By MS/MS 4.5 0.5 1 1 2 5830400 5830400 0 7251 1025 7519 18071;18072 12822 12822 1 163040 0 IVEGILKRPPDEQR FTDAKESSTVFELKRIVEGILKRPPDEQRL RIVEGILKRPPDEQRLYKDDQLLDDGKTLG R I V Q R L 0 2 0 1 0 1 2 1 0 2 1 1 0 0 2 0 0 0 0 1 0 0 14 2 1648.9261 Q15370 Q15370 30 43 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 3 0.0018242 113.95 By MS/MS 10 0 1 1 859810 859810 0 7252 1492 7520 18073 12823 12823 1 913880 0 IVEIPFNSTNK LCCGSVKEMRERYAKIVEIPFNSTNKYQLS RYAKIVEIPFNSTNKYQLSIHKNPNTSEPQ K I V N K Y 0 0 2 0 0 0 1 0 0 2 0 1 0 1 1 1 1 0 0 1 0 0 11 0 1260.6714 P05023 P05023 477 487 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.010358 98.04 By MS/MS By matching 3.67 1.7 1 1 2 1 1 5 1 26605000 26531000 73773 7253 463 7521 18074;18075;18076;18077;18078;18079 12824;12825;12826;12827;12828 12827 5 848450 154160 IVEISYYNMNR ELASPHHPRMFSLQKIVEISYYNMNRIRLQ SLQKIVEISYYNMNRIRLQWSRIWHVIGDH K I V N R I 0 1 2 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 2 1 0 0 11 0 1400.6758 Q9Y6D5 Q9Y6D5 1116 1126 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 6.8588E-05 161.79 By MS/MS 2 0 1 1 280330 280330 0 7254 3002 7522 18080 12829 12829 1729 1 13934 0 IVEMEDVGLLFAR MWYAPVGIMFLVAGKIVEMEDVGLLFARLG GKIVEMEDVGLLFARLGKYILCCLLGHAIH K I V A R L 1 1 0 1 0 0 2 1 0 1 2 0 1 1 0 0 0 0 0 2 0 0 13 0 1490.7803 Q15758 Q15758 289 301 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.0011144 123.62 By MS/MS 3.5 1.5 1 1 2 258920 258920 0 7255 1518 7523 18081;18082 12830;12831;12832 12832 1165 3 11536 0 IVEMSTSK LRKNGFVVLKGRPCKIVEMSTSKTGKHGHA LKGRPCKIVEMSTSKTGKHGHAKVHLVGID K I V S K T 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 2 1 0 0 1 0 0 8 0 893.45282 P63241;Q9GZV4 P63241 40 47 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 2 0.0041329 141.52 By MS/MS 9.5 0.5 1 1 2 2274300 2274300 0 7256 1177 7524 18083;18084 12833 12833 1 2380000 0 IVEPPENIQEK TNIDTLLVATDQTERIVEPPENIQEKIAFI QTERIVEPPENIQEKIAFIFNNLSQSNMTQ R I V E K I 0 0 1 0 0 1 3 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 11 0 1294.6769 A5YKK6 A5YKK6 1088 1098 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0013616 128.81 By MS/MS 2 0.816 1 1 1 3 1590100 1590100 0 7257 19 7525 18085;18086;18087 12834 12834 1 61408 0 IVEQDTMPPKGVR ADRMLDMGFEPQIRRIVEQDTMPPKGVRHT RRIVEQDTMPPKGVRHTMMFSATFPKEIQM R I V V R H 0 1 0 1 0 1 1 1 0 1 0 1 1 0 2 0 1 0 0 2 0 0 13 1 1468.7708 O00571;O15523 O00571 364 376 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.010004 81.625 By MS/MS By matching 5 0 2 1 1 1188000 1155400 32597 7258 105 7526 18088;18089 12835;12836 12835 72 2 47493 96456 IVEQPTVSVTEPK FKVNLDSEQAVKEEKIVEQPTVSVTEPKLA EKIVEQPTVSVTEPKLATPAGLKKSSKKAE K I V P K L 0 0 0 0 0 1 2 0 0 1 0 1 0 0 2 1 2 0 0 3 0 0 13 0 1425.7715 Q15054 Q15054 262 274 POLD3 DNA polymerase delta subunit 3 yes yes 2 1.2442E-07 184.98 By MS/MS 5.5 0.5 1 1 2 2506200 2506200 0 7259 1473 7527 18090;18091 12837 12837 1 63115 0 IVETEAYLGPEDEAAHSR VLVRRLPNGTELRGRIVETEAYLGPEDEAA TEAYLGPEDEAAHSRGGRQTPRNRGMFMKP R I V S R G 3 1 0 1 0 0 4 1 1 1 1 0 0 0 1 1 1 0 1 1 0 0 18 0 1985.933 P29372 P29372 121 138 MPG DNA-3-methyladenine glycosylase yes yes 3 0.016855 67.326 By MS/MS 8 0 1 1 1148800 1148800 0 7260 724 7528 18092 12838 12838 1 75789 0 IVETHQPIVETYYGPGR IFADTLTLLFEGIARIVETHQPIVETYYGP ETHQPIVETYYGPGRLYTLIKYLQVECDRQ R I V G R L 0 1 0 0 0 1 2 2 1 2 0 0 0 0 2 0 2 0 2 2 0 0 17 0 1957.9898 Q9H9E3 Q9H9E3 282 298 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 3 0.0010686 115.38 By MS/MS 5 0 1 1 1517400 1517400 0 7261 2534 7529 18093 12839 12839 1 62370 0 IVEYEKEMEK DVKSCAEWVSLSKARIVEYEKEMEKMKNLI LSKARIVEYEKEMEKMKNLIPFDQMTIEDL R I V E K M 0 0 0 0 0 0 4 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 10 1 1296.6272 O75947 O75947 112 121 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.00018266 178.55 By MS/MS By matching 9.4 0.49 3 2 4 1 1794400 1777700 16718 7262 340 7530;7531 18094;18095;18096;18097;18098 12840;12841 12840 187 2 1265800 180170 IVFNLCPLQTEDDK YTLFSASSEGQNHSRIVFNLCPLQTEDDKQ RIVFNLCPLQTEDDKQLLLSTSMDRDVKCW R I V D K Q 0 0 1 2 1 1 1 0 0 1 2 1 0 1 1 0 1 0 0 1 0 0 14 0 1690.8236 Q8TEQ6 Q8TEQ6 336 349 GEMIN5 Gem-associated protein 5 yes yes 2 6.5802E-06 171.32 By MS/MS 2.5 1.12 1 1 1 1 4 1146500 1146500 0 7263 2003 7532 18099;18100;18101;18102 12842 12842 1 30850 0 IVFQEFR VLEGIRICRQGFPNRIVFQEFRQRYEILTP CRQGFPNRIVFQEFRQRYEILTPNAIPKGF R I V F R Q 0 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 7 0 937.50215 P35580 P35580 719 725 MYH10 Myosin-10 no no 2 0.020651 124.59 By MS/MS 2.5 0.5 1 1 2 474150 474150 0 7264 794 7533 18103;18104 12843 12843 1 20041 0 IVFSPEEAK RGKGTFESGLKGGVKIVFSPEEAKAVSSQM LKGGVKIVFSPEEAKAVSSQMIGKKLFTKQ K I V A K A 1 0 0 0 0 0 2 0 0 1 0 1 0 1 1 1 0 0 0 1 0 0 9 0 1018.5335 Q9P2R7 Q9P2R7 121 129 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.035991 87.696 By MS/MS 7 0 1 1 19816000 19816000 0 7265 2741 7534 18105 12844 12844 1 354120 0 IVFVPGCSIPLTIVK EFEDRGFVQVDDGRKIVFVPGCSIPLTIVK IVFVPGCSIPLTIVKSDGGYTYDTSDLAAI K I V V K S 0 0 0 0 1 0 0 1 0 3 1 1 0 1 2 1 1 0 0 3 0 0 15 0 1641.9528 P54136 P54136 363 377 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.046477 52.555 By MS/MS 5.5 0.5 1 1 2 643380 643380 0 7266 1013 7535 18106;18107 12845 12845 1 10818 0 IVFVTGNAK ______________________________ SLVGKKIVFVTGNAKKLEEVVQILGDKFPC K I V A K K 1 0 1 0 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 2 0 0 9 0 947.54402 Q9BY32 Q9BY32 10 18 ITPA Inosine triphosphate pyrophosphatase yes yes 2 0.023614 105.57 By MS/MS 9 0 1 1 1982100 1982100 0 7267 2406 7536 18108 12846 12846 1 1137500 0 IVGDLFGAGK RPLNIIEGPLMNGMKIVGDLFGAGKMFLPQ MNGMKIVGDLFGAGKMFLPQVIKSARVMKK K I V G K M 1 0 0 1 0 0 0 3 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 0 975.53893 Q99707 Q99707 718 727 MTR Methionine synthase yes yes 2 0.022528 90.601 By MS/MS 3 0 1 1 977160 977160 0 7268 2284 7537 18109 12847 12847 1 25509 0 IVGELEQMVSEDVPLDHR GYEKNTEAARDAILRIVGELEQMVSEDVPL ELEQMVSEDVPLDHRVHARIIGARGKAIRK R I V H R V 0 1 0 2 0 1 3 1 1 1 2 0 1 0 1 1 0 0 0 3 0 0 18 0 2065.015 Q00341 Q00341 1120 1137 HDLBP Vigilin yes yes 3 0.0416 60.093 By MS/MS 3 0 1 1 728490 728490 0 7269 1231 7538 18110 12848 12848 1 19017 0 IVGHLTHALK GAVSLGHPIGMSGARIVGHLTHALKQGEYG MSGARIVGHLTHALKQGEYGLASICNGGGG R I V L K Q 1 0 0 0 0 0 0 1 2 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1087.6502 P24752 P24752 394 403 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 7.6775E-05 168.27 By MS/MS 7 0 1 1 2392300 2392300 0 7270 680 7539 18111 12849 12849 1 42750 0 IVGLLAQLEK KLKVIPEKSLTNNSRIVGLLAQLEKINAEP TNNSRIVGLLAQLEKINAEPSESDTARYVT R I V E K I 1 0 0 0 0 1 1 1 0 1 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1082.6699 Q9UPW5 Q9UPW5 18 27 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 2 0.0043923 109.44 By MS/MS 3 0 1 1 202370 202370 0 7271 2855 7540 18112 12850 12850 1 5282.9 0 IVGLSTALANAR SRTNFISSHTEKPVRIVGLSTALANARDLA PVRIVGLSTALANARDLADWLNIKQMGLFN R I V A R D 3 1 1 0 0 0 0 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 12 0 1184.6877 Q8N3C0 Q8N3C0 1486 1497 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 4.7873E-11 204.52 By MS/MS 2 0.816 1 1 1 3 852010 852010 0 7272 1908 7541 18113;18114;18115 12851 12851 1 34833 0 IVGPEENLSQAEAR KVFFDKAKHEIKTIKIVGPEENLSQAEARN KIVGPEENLSQAEARNMGMDFCRQDEKCDY K I V A R N 2 1 1 0 0 1 3 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 14 0 1511.758 O00469 O00469 359 372 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 2 0.00015095 141.58 By MS/MS 4.5 0.5 1 1 2 1557600 1557600 0 7273 97 7542 18116;18117 12852 12852 1 49637 0 IVGPSGAAVPCK VKSKGAGGQGKVASKIVGPSGAAVPCKVEP ASKIVGPSGAAVPCKVEPGLGADNSVVRFL K I V C K V 2 0 0 0 1 0 0 2 0 1 0 1 0 0 2 1 0 0 0 2 0 0 12 0 1154.6118 P21333 P21333 1008 1019 FLNA Filamin-A yes yes 2 0.010309 96.665 By MS/MS 2.5 0.5 1 1 2 549450 549450 0 7274 648 7543 18118;18119 12853 12853 1 23153 0 IVGPSGAAVPCKVEPGLGADNSVVR VKSKGAGGQGKVASKIVGPSGAAVPCKVEP CKVEPGLGADNSVVRFLPREEGPYEVEVTY K I V V R F 3 1 1 1 1 0 1 4 0 1 1 1 0 0 3 2 0 0 0 5 0 0 25 1 2448.2795 P21333 P21333 1008 1032 FLNA Filamin-A yes yes 3 0.0024252 62.735 By MS/MS 3 0.816 1 1 1 3 1912000 1912000 0 7275 648 7544 18120;18121;18122 12854 12854 1 70794 0 IVHDLISR MDGEKDPRNLLVAFRIVHDLISRDYSLGPF NLLVAFRIVHDLISRDYSLGPFVEELFEVT R I V S R D 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 1 0 0 0 1 0 0 8 0 951.55016 Q96T76 Q96T76 196 203 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2;3 0.012978 101.72 By MS/MS 4 0 2 2 1654700 1654700 0 7276 2261 7545 18123;18124 12855;12856 12855 2 45171 0 IVHSSMTR LTGLRLASLGLKFNKIVHSSMTRAIETTDI LGLKFNKIVHSSMTRAIETTDIISRHLPGV K I V T R A 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 2 1 0 0 1 0 0 8 0 929.47529 Q96HS1 Q96HS1 145 152 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 0.013407 114.5 By MS/MS By matching 8.29 0.452 5 2 6 1 3817400 3801900 15498 7277 2196 7546;7547 18125;18126;18127;18128;18129;18130;18131 12857;12858;12859;12860 12859 1402 4 349400 132220 IVIGYQSHADTATK HIGRVYKERLGLPPKIVIGYQSHADTATKS KIVIGYQSHADTATKSGSTTKNRFVV____ K I V T K S 2 0 0 1 0 1 0 1 1 2 0 1 0 0 0 1 2 0 1 1 0 0 14 0 1502.7729 P06730 P06730 193 206 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 2.2235E-35 298.84 By MS/MS 8.5 0.5 1 1 2 2025200 2025200 0 7278 481 7548 18132;18133 12861 12861 1 1025200 0 IVILEYQPSK GGTKDYIVVGSDSGRIVILEYQPSKNMFEK SDSGRIVILEYQPSKNMFEKIHQETFGKSG R I V S K N 0 0 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 1 1 0 0 10 0 1188.6754 Q15393 Q15393 87 96 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.006148 103.7 By MS/MS 2.5 1.12 1 1 1 1 4 1259600 1259600 0 7279 1498 7549 18134;18135;18136;18137 12862 12862 1 42865 0 IVKDSLSDDVVK LQPKPRSGAVEETFRIVKDSLSDDVVKATQ TFRIVKDSLSDDVVKATQAIYLFELSGEDG R I V V K A 0 0 0 3 0 0 0 0 0 1 1 2 0 0 0 2 0 0 0 3 0 0 12 1 1316.7187 Q6YN16 Q6YN16 316 327 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 2;3 0.0049979 137.01 By MS/MS 6.67 0.471 1 2 3 2876000 2876000 0 7280 1738 7550 18138;18139;18140 12863;12864 12864 2 48484 0 IVLAGCVPQAQPR HFRNSIKKAQEENKKIVLAGCVPQAQPRQD KKIVLAGCVPQAQPRQDYLKGLSIIGVQQI K I V P R Q 2 1 0 0 1 2 0 1 0 1 1 0 0 0 2 0 0 0 0 2 0 0 13 0 1407.7657 Q5VV42 Q5VV42 133 145 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase yes yes 2 2.9078E-05 166.16 By MS/MS 6 0 1 1 10528000 10528000 0 7281 1652 7551 18141 12865 12865 1 82099 0 IVLLDSSLEYK DVTHPRMRRYIKNPRIVLLDSSLEYKKGES KNPRIVLLDSSLEYKKGESQTDIEITREED R I V Y K K 0 0 0 1 0 0 1 0 0 1 3 1 0 0 0 2 0 0 1 1 0 0 11 0 1278.7071 P49368 P49368 238 248 CCT3 T-complex protein 1 subunit gamma yes yes 2 7.8936E-12 213.53 By MS/MS By MS/MS 5.88 1.9 1 1 4 4 3 2 1 14 2 326890000 326710000 180900 7282 916 7552 18142;18143;18144;18145;18146;18147;18148;18149;18150;18151;18152;18153;18154;18155;18156;18157 12866;12867;12868;12869;12870;12871;12872;12873;12874;12875;12876 12875 11 3328500 553230 IVLLDSSLEYKK DVTHPRMRRYIKNPRIVLLDSSLEYKKGES NPRIVLLDSSLEYKKGESQTDIEITREEDF R I V K K G 0 0 0 1 0 0 1 0 0 1 3 2 0 0 0 2 0 0 1 1 0 0 12 1 1406.8021 P49368 P49368 238 249 CCT3 T-complex protein 1 subunit gamma yes yes 2 2.1099E-06 179.42 By MS/MS 6 0.816 1 1 1 3 8638600 8638600 0 7283 916 7553 18158;18159;18160 12877 12877 1 76338 0 IVLLMAYSGK SGGDEERREKPPKRKIVLLMAYSGKGYHGM PPKRKIVLLMAYSGKGYHGMQRNVGSSQFK K I V G K G 1 0 0 0 0 0 0 1 0 1 2 1 1 0 0 1 0 0 1 1 0 0 10 0 1093.6206 Q9Y606 Q9Y606 86 95 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 0.00056781 130.75 By MS/MS 7 0 1 1 658780 658780 0 7284 2992 7554 18161 12878 12878 1720 1 11773 0 IVLLSANSIR LHHPRATFLGLTNEKIVLLSANSIRATVAT LTNEKIVLLSANSIRATVATENNKVATWVD K I V I R A 1 1 1 0 0 0 0 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1084.6604 O95071 O95071 424 433 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 1.3507E-06 192.91 By MS/MS 3 1.41 1 1 1 1 1 5 2916900 2916900 0 7285 364 7555 18162;18163;18164;18165;18166 12879;12880;12881;12882;12883 12879 5 116000 0 IVLTNPVCTEVGEK STGGRVSAVKADLGKIVLTNPVCTEVGEKI KIVLTNPVCTEVGEKIALSRRVEKHWRLIG K I V E K I 0 0 1 0 1 0 2 1 0 1 1 1 0 0 1 0 2 0 0 3 0 0 14 0 1557.8072 P41091;Q2VIR3 P41091 427 440 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 2.5417E-12 207.47 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 13501000 13443000 58550 7286 836 7556 18167;18168;18169;18170 12884;12885;12886 12885 3 159070 179570 IVMNMNK MGSIISNLPSWIYLKIVMNMNKSTRAHYLK LPSWIYLKIVMNMNKSTRAHYLKKTKKN__ K I V N K S 0 0 2 0 0 0 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 7 0 848.42483 Q53GQ0 Q53GQ0 293 299 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.0063011 117.56 By MS/MS 8 0 1 1 326970 326970 0 7287 1584 7557 18171 12887 12887 1184;1185 1 21570 0 IVNLACK PDIVLWPTCHDDVVKIVNLACKYNLCIIPI TCHDDVVKIVNLACKYNLCIIPIGGGTSVS K I V C K Y 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 816.45276 O00116 O00116 221 227 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 0.038642 108.98 By MS/MS 5 0 1 1 1552600 1552600 0 7288 67 7558 18172 12888 12888 1 63817 0 IVNQPSSLFGSK NTVNAALKPLETLSRIVNQPSSLFGSKSAS LSRIVNQPSSLFGSKSASSKNKSEQDAQGA R I V S K S 0 0 1 0 0 1 0 1 0 1 1 1 0 1 1 3 0 0 0 1 0 0 12 0 1275.6823 Q7Z6Z7 Q7Z6Z7 2256 2267 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0031481 127.83 By MS/MS 3 1.41 1 1 1 1 1 5 3783500 3783500 0 7289 1803 7559 18173;18174;18175;18176;18177 12889;12890 12889 2 172490 0 IVNSAQTGSFK PTPAEIPRAIQSLKKIVNSAQTGSFKQLTV SLKKIVNSAQTGSFKQLTVKEAVLNGLVAT K I V F K Q 1 0 1 0 0 1 0 1 0 1 0 1 0 1 0 2 1 0 0 1 0 0 11 0 1150.5982 O75964 O75964 56 66 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 8.8825E-11 204.56 By MS/MS By matching 10 0 2 1 1 9086100 9066300 19750 7290 341 7560 18178;18179 12891 12891 1 9636600 506580 IVNSFLCLVPDDAK TPDHPKNDGKTEVHKIVNSFLCLVPDDAKS KIVNSFLCLVPDDAKSSYHVEGTGYDTYLR K I V A K S 1 0 1 2 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 2 0 0 14 0 1589.8123 Q5W0V3 Q5W0V3 568 581 FAM160B1 Protein FAM160B1 yes yes 2 0.0047304 118.87 By MS/MS 4 0 1 1 340240 340240 0 7291 1662 7561 18180 12892 12892 1 9288.3 0 IVNTPFQVLMNSEK TYKAENLGEVLRGDRIVNTPFQVLMNSEKK RIVNTPFQVLMNSEKKCEVLCSQSNKPVTL R I V E K K 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 1 0 0 2 0 0 14 0 1618.8389 Q92544 Q92544 85 98 TM9SF4 Transmembrane 9 superfamily member 4 yes yes 2 0.0032011 105.36 By MS/MS 2 0.816 1 1 1 3 233060 233060 0 7292 2057 7562 18181;18182;18183 12893 12893 1338 1 9794.2 0 IVNVSLADLR TVHYRPINLSSSENKIVNVSLADLRGGNRP SSENKIVNVSLADLRGGNRPNTGPLYTEAD K I V L R G 1 1 1 1 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 2 0 0 10 0 1098.6397 Q9HAU0 Q9HAU0 378 387 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 2 0.00080677 131.82 By MS/MS 3 0 1 1 438860 438860 0 7293 2544 7563 18184 12894 12894 1 11457 0 IVPGQFLAVDPK EKIHQETFGKSGCRRIVPGQFLAVDPKGRA CRRIVPGQFLAVDPKGRAVMISAIEKQKLV R I V P K G 1 0 0 1 0 1 0 1 0 1 1 1 0 1 2 0 0 0 0 2 0 0 12 0 1282.7285 Q15393 Q15393 115 126 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.013515 93.096 By MS/MS 2.5 1.12 1 1 1 1 4 2169300 2169300 0 7294 1498 7564 18185;18186;18187;18188 12895 12895 1 75286 0 IVPNVLLEQGK LPNDPMFKLVAQLYKIVPNVLLEQGKAKNP QLYKIVPNVLLEQGKAKNPWPNVDAHSGVL K I V G K A 0 0 1 0 0 1 1 1 0 1 2 1 0 0 1 0 0 0 0 2 0 0 11 0 1208.7129 O75390 O75390 383 393 CS Citrate synthase, mitochondrial yes yes 2 0.013196 95.483 By MS/MS By matching 7 0 2 1 1 18577000 18536000 40941 7295 302 7565 18189;18190 12896 12896 1 331250 168070 IVQAEGEAEAAK AQFLVEKAKQEQRQKIVQAEGEAEAAKMLG RQKIVQAEGEAEAAKMLGEALSKNPGYIKL K I V A K M 4 0 0 0 0 1 3 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 12 0 1214.6143 Q99623 Q99623 225 236 PHB2 Prohibitin-2 yes yes 2 1.7804E-05 173.04 By MS/MS By MS/MS 6.5 3.04 1 1 2 2 1 1 6 2 53266000 50468000 2797600 7296 2277 7566 18191;18192;18193;18194;18195;18196;18197;18198 12897;12898;12899;12900;12901;12902 12897 6 3526400 23701000 IVQEDRAVESR KDSAIQQQVANLQMKIVQEDRAVESRTTDL LQMKIVQEDRAVESRTTDLLTDWEKTKPVT K I V S R T 1 2 0 1 0 1 2 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 11 1 1300.6735 Q14204 Q14204 1243 1253 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.010749 124.67 By MS/MS 1.5 0.5 2 2 4 1079000 1079000 0 7297 1421 7567 18199;18200;18201;18202 12903;12904 12903 2 52982 0 IVQLLAGVADQTK QRYLGLYNDPNSNPKIVQLLAGVADQTKDG PKIVQLLAGVADQTKDGLISYQEFLAFESV K I V T K D 2 0 0 1 0 2 0 1 0 1 2 1 0 0 0 0 1 0 0 2 0 0 13 0 1354.782 O75746 O75746 56 68 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.00035755 170.4 By MS/MS 5 0 1 1 4282200 4282200 0 7298 327 7568 18203 12905 12905 1 176020 0 IVQLLGQNEVDYR VSGGTASGKSSVCAKIVQLLGQNEVDYRQK AKIVQLLGQNEVDYRQKQVVILSQDSFYRV K I V Y R Q 0 1 1 1 0 2 1 1 0 1 2 0 0 0 0 0 0 0 1 2 0 0 13 0 1545.8151 Q9BZX2 Q9BZX2 40 52 UCK2 Uridine-cytidine kinase 2 yes yes 2 1.2872E-05 172.13 By MS/MS 9 0.816 1 1 1 3 5902400 5902400 0 7299 2428 7569 18204;18205;18206 12906 12906 1 487410 0 IVQVALNGLENILR CIKPLCDLLTVMDSKIVQVALNGLENILRL KIVQVALNGLENILRLGEQEGKRSGSGVNP K I V L R L 1 1 2 0 0 1 1 1 0 2 3 0 0 0 0 0 0 0 0 2 0 0 14 0 1550.9144 O60684;O15131;P52294 O60684 437 450 KPNA6;KPNA5;KPNA1 Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 2 6.6124E-35 252.21 By MS/MS 6 0 1 1 1482300 1482300 0 7300 258;984 7570 18207 12907 12907 1 11559 0 IVRGDQPAASGDSDDDEPPPLPR LNLLLLGLCIFLLYKIVRGDQPAASGDSDD ASGDSDDDEPPPLPRLKRRDFTPAELRRFD K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3 8.0013E-08 134.66 By MS/MS 9 0 2 2 3772900 3772900 0 7301 85 7571 18208;18209 12908;12909 12908 2 2165300 0 IVSAHTQK ANVALFDGVVSKGDKIVSAHTQKTYEVNEV VVSKGDKIVSAHTQKTYEVNEVGVLNPNEQ K I V Q K T 1 0 0 0 0 1 0 0 1 1 0 1 0 0 0 1 1 0 0 1 0 0 8 0 882.49232 Q8N442 Q8N442 286 293 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.019809 107.01 By MS/MS 5 0 1 1 174540 174540 0 7302 1913 7572 18210 12910 12910 1 7174.2 0 IVSAQSLAEDDVE VFQMLLTKLPTISQRIVSAQSLAEDDVE__ QRIVSAQSLAEDDVE_______________ R I V V E - 2 0 0 2 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 13 0 1374.6515 Q15388 Q15388 133 145 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 8.2469E-08 185.99 By MS/MS By MS/MS 10 0 4 3 1 36689000 36520000 168560 7303 1495 7573 18211;18212;18213;18214 12911;12912;12913;12914 12914 4 38817000 4323500 IVSGKDYNVTANSK MMDLQHGSLFLRTPKIVSGKDYNVTANSKL KIVSGKDYNVTANSKLVIITAGARQQEGES K I V S K L 1 0 2 1 0 0 0 1 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1494.7678 P00338 P00338 77 90 LDHA L-lactate dehydrogenase A chain yes yes 2 4.2733E-05 171.99 By MS/MS 8 0 1 1 1117000 1117000 0 7304 424 7574 18215 12915 12915 1 73690 0 IVSQLLTLMDGLK IAPKREKTHGEVERRIVSQLLTLMDGLKQR RRIVSQLLTLMDGLKQRAHVIVMAATNRPN R I V L K Q 0 0 0 1 0 1 0 1 0 1 4 1 1 0 0 1 1 0 0 1 0 0 13 0 1429.8214 P55072 P55072 324 336 VCP Transitional endoplasmic reticulum ATPase yes yes 2 1.0571E-07 182.41 By MS/MS 4 0 1 1 328510 328510 0 7305 1026 7575 18216 12916 12916 799 1 8968.1 0 IVSRPEELREDDVGTGAGLLEIK RKTDNNRIARACGARIVSRPEELREDDVGT REDDVGTGAGLLEIKKIGDEYFTFITDCKD R I V I K K 1 2 0 2 0 0 4 3 0 2 3 1 0 0 1 1 1 0 0 2 0 0 23 2 2495.3231 P49368 P49368 331 353 CCT3 T-complex protein 1 subunit gamma yes yes 2;3;4 3.5246E-06 115.58 By MS/MS 6.25 0.968 2 3 2 1 8 556550000 556550000 0 7306 916 7576 18217;18218;18219;18220;18221;18222;18223;18224 12917;12918;12919;12920;12921;12922 12922 6 4529700 0 IVSTSLDCLQK YFLPFELACQSKCPRIVSTSLDCLQKLIAY KCPRIVSTSLDCLQKLIAYGHLTGNAPDST R I V Q K L 0 0 0 1 1 1 0 0 0 1 2 1 0 0 0 2 1 0 0 1 0 0 11 0 1262.654 Q9Y6D6 Q9Y6D6 95 105 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.0011893 131.12 By MS/MS 2.5 0.5 1 1 2 789570 789570 0 7307 3003 7577 18225;18226 12923 12923 1 33267 0 IVTDRETGSSK EETLKESFDGSVRARIVTDRETGSSKGFGF VRARIVTDRETGSSKGFGFVDFNSEEDAKA R I V S K G 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 2 2 0 0 1 0 0 11 1 1191.6095 P19338 P19338 600 610 NCL Nucleolin yes yes 2 0.00074638 161.67 By MS/MS By matching 4.33 0.471 2 1 2 1 769260 763710 5551.9 7308 629 7578 18227;18228;18229 12924 12924 1 22557 11601 IVTDSDSKTEELR KFIVDGVEVSVTTSKIVTDSDSKTEELRFL SKIVTDSDSKTEELRFLRRQELRELRFLQK K I V L R F 0 1 0 2 0 0 2 0 0 1 1 1 0 0 0 2 2 0 0 1 0 0 13 1 1491.7417 Q9H2G2 Q9H2G2 812 824 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0022694 142.76 By MS/MS 2 0 1 1 176380 176380 0 7309 2476 7579 18230 12925 12925 1 8767.2 0 IVTGLSESSVK DIRKKIIETENMMDRIVTGLSESSVKVRLA MMDRIVTGLSESSVKVRLAAVRCLHSLSRS R I V V K V 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 3 1 0 0 2 0 0 11 0 1118.6183 Q8IUR7 Q8IUR7 389 399 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.0048335 108.43 By MS/MS 5 0 1 1 1358300 1358300 0 7310 1854 7580 18231 12926 12926 1 55831 0 IVTTPQTVLR IIMRFRKRKNFKKKRIVTTPQTVLRINSIE FKKKRIVTTPQTVLRINSIEIAPCLL____ R I V L R I 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 3 0 0 2 0 0 10 0 1126.671 Q7Z2W9 Q7Z2W9 185 194 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 0.0007548 134.23 By MS/MS By matching 9.33 0.471 2 1 2 1 4281300 4237700 43564 7311 1778 7581 18232;18233;18234 12927;12928 12927 2 2910300 469490 IVTTYIR SKLSSYPRLREETERIVTTYIREREGRTKD RLREETERIVTTYIREREGRTKDQILLLID R I V I R E 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 2 0 1 1 0 0 7 0 864.5069 P50570 P50570 459 465 DNM2 Dynamin-2 yes yes 2 0.035671 111.04 By MS/MS 4 0 1 1 1201600 1201600 0 7312 949 7582 18235 12929 12929 1 32801 0 IVTVVPQDTK VSHGEVLRKVERGSRIVTVVPQDTKLVLQM ERGSRIVTVVPQDTKLVLQMPRGNLEVVHH R I V T K L 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 2 0 0 3 0 0 10 0 1098.6285 O95163 O95163 697 706 IKBKAP Elongator complex protein 1 yes yes 2 0.00028855 153.24 By MS/MS 2.5 1.12 1 1 1 1 4 3260900 3260900 0 7313 368 7583 18236;18237;18238;18239 12930;12931;12932 12930 3 115140 0 IVVEFSSPNVAK YGLKSELFSGLPQKKIVVEFSSPNVAKKFH QKKIVVEFSSPNVAKKFHVGHLRSTIIGNF K I V A K K 1 0 1 0 0 0 1 0 0 1 0 1 0 1 1 2 0 0 0 3 0 0 12 0 1288.7027 Q5T160 Q5T160 127 138 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.0014639 128.03 By MS/MS 6 0 1 1 4573600 4573600 0 7314 1624 7584 18240 12933 12933 1 35665 0 IVVEHIIMK SRRNPYCRTLFNELRIVVEHIIMKPACPLF LFNELRIVVEHIIMKPACPLFVRRLCLQSI R I V M K P 0 0 0 0 0 0 1 0 1 3 0 1 1 0 0 0 0 0 0 2 0 0 9 0 1080.6365 P57088 P57088 213 221 TMEM33 Transmembrane protein 33 yes yes 2 0.039036 80.165 By MS/MS 9 0 1 1 354160 354160 0 7315 1053 7585 18241 12934 12934 816 1 203250 0 IVVFQYSDGK TAMVYPEEAEPKQGRIVVFQYSDGKLQTVA PKQGRIVVFQYSDGKLQTVAEKEVKGAVYS R I V G K L 0 0 0 1 0 1 0 1 0 1 0 1 0 1 0 1 0 0 1 2 0 0 10 0 1154.5972 Q16531 Q16531 848 857 DDB1 DNA damage-binding protein 1 yes yes 2 0.00088334 133.13 By MS/MS 2.5 1.12 1 1 1 1 4 1015900 1015900 0 7316 1537 7586 18242;18243;18244;18245 12935;12936;12937;12938 12936 4 38888 0 IVVNLTGR YIGEFEIIDDHRAGKIVVNLTGRLNKCGVI DDHRAGKIVVNLTGRLNKCGVISPRFDVQL K I V G R L 0 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 2 0 0 8 0 870.5287 P62244 P62244 61 68 RPS15A 40S ribosomal protein S15a yes yes 2 0.017402 110.12 By MS/MS 10 0 1 1 9785200 9785200 0 7317 1119 7587 18246 12939 12939 1 10401000 0 IVVSNTPR DTQLVVRQASLHVWKIVVSNTPRTLREILP ASLHVWKIVVSNTPRTLREILPTLFGLLLG K I V P R T 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 2 0 0 8 0 884.50797 Q92616 Q92616 1910 1917 GCN1L1 Translational activator GCN1 yes yes 2 0.003131 148.99 By MS/MS 3 1.41 1 1 1 1 1 5 4774600 4774600 0 7318 2068 7588 18247;18248;18249;18250;18251 12940;12941 12940 2 213760 0 IVVVTAGVR KIVADKDYSVTANSKIVVVTAGVRQQEGES VTANSKIVVVTAGVRQQEGESRLNLVQRNV K I V V R Q 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 4 0 0 9 0 912.57565 P07195 P07195 92 100 LDHB L-lactate dehydrogenase B chain yes yes 2 0.00053217 152.63 By MS/MS 8.5 0.5 1 1 2 4088400 4088400 0 7319 486 7589 18252;18253 12942 12942 1 354700 0 IVYGHLDDPASQEIER IVRKRLNRPLTLSEKIVYGHLDDPASQEIE VYGHLDDPASQEIERGKSYLRLRPDRVAMQ K I V E R G 1 1 0 2 0 1 2 1 1 2 1 0 0 0 1 1 0 0 1 1 0 0 16 0 1840.8955 Q99798 Q99798 69 84 ACO2 Aconitate hydratase, mitochondrial yes yes 3 0.017927 74.772 By MS/MS 4.5 0.5 1 1 2 1220900 1220900 0 7320 2292 7590 18254;18255 12943 12943 1 48714 0 IVYLCITDDDFER YSHGNYLFHYICQDRIVYLCITDDDFERSR DRIVYLCITDDDFERSRAFNFLNEIKKRFQ R I V E R S 0 1 0 3 1 0 1 0 0 2 1 0 0 1 0 0 1 0 1 1 0 0 13 0 1657.7658 P51809 P51809 60 72 VAMP7 Vesicle-associated membrane protein 7 yes yes 2 0.0021389 137.17 By MS/MS 9 0 1 1 130990 130990 0 7321 978 7591 18256 12944 12944 1 75178 0 IVYPPQLPGEPR SASLDISRKWEKKNKIVYPPQLPGEPRRPA KNKIVYPPQLPGEPRRPAEIYHCRRQIKYS K I V P R R 0 1 0 0 0 1 1 1 0 1 1 0 0 0 4 0 0 0 1 1 0 0 12 0 1364.7452 Q9NWU5 Q9NWU5 51 62 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.039551 77.662 By MS/MS 9 0 1 1 2462400 2462400 0 7322 2670 7592 18257 12945 12945 1 1413200 0 IWAHEALR ALRPLETLPVEGLIRIWAHEALRLFQDRLV PVEGLIRIWAHEALRLFQDRLVEDEERRWT R I W L R L 2 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 8 0 994.53485 Q14204 Q14204 2824 2831 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.012352 116.9 By MS/MS 1 0 1 1 0 0 0 7323 1421 7593 18258 12946 12946 1 0 0 IWDLEGK PNRYWLCAATGPSIKIWDLEGKIIVDELKQ AATGPSIKIWDLEGKIIVDELKQEVISTSS K I W G K I 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 0 7 0 859.44397 P63244 P63244 258 264 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.020651 124.59 By MS/MS By matching 8.33 0.471 2 1 2 1 7208000 7118300 89750 7324 1178 7594 18259;18260;18261 12947 12947 1 496360 765680 IWDLQAGADR AANVLASSSYDLTVRIWDLQAGADRLKLQG DLTVRIWDLQAGADRLKLQGHQDQIFSLAW R I W D R L 2 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 10 0 1143.5673 P57737 P57737 621 630 CORO7 Coronin-7 yes yes 2 0.0031667 113.44 By MS/MS 4 0 1 1 631470 631470 0 7325 1056 7595 18262 12948 12948 1 17238 0 IWDLQGSEEPVFR HPHVVATGGKENALKIWDLQGSEEPVFRAK LKIWDLQGSEEPVFRAKNVRNDWLDLRVPI K I W F R A 0 1 0 1 0 1 2 1 0 1 1 0 0 1 1 1 0 1 0 1 0 0 13 0 1574.7729 Q6RFH5 Q6RFH5 157 169 WDR74 WD repeat-containing protein 74 yes yes 2 0.0017522 152.67 By MS/MS 7 0 1 1 268980 268980 0 7326 1723 7596 18263 12949 12949 1 4806.7 0 IWDPTPSHTPAGAATPGR RAKGSETPGATPGSKIWDPTPSHTPAGAAT PTPSHTPAGAATPGRGDTPGHATPGHGGAT K I W G R G 3 1 0 1 0 0 0 2 1 1 0 0 0 0 4 1 3 1 0 0 0 0 18 0 1830.9013 O75533 O75533 253 270 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.020977 63.546 By MS/MS 3 0 1 1 1620500 1620500 0 7327 315 7597 18264 12950 12950 1 42303 0 IWDTLQK LPELKLEERTEFAHRIWDTLQKLGAVYDVS ERTEFAHRIWDTLQKLGAVYDVSHYNALLK R I W Q K L 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 1 1 0 0 0 0 7 0 902.48617 P42704 P42704 149 155 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.010498 152.63 By MS/MS 3 0.816 1 1 1 3 25320000 25320000 0 7328 854 7598 18265;18266;18267 12951;12952 12951 2 664440 0 IWDYQNK DKPYLISGADDRLVKIWDYQNKTCVQTLEG GADDRLVKIWDYQNKTCVQTLEGHAQNVSC K I W N K T 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 7 0 965.46068 P35606 P35606 213 219 COPB2 Coatomer subunit beta yes yes 2 0.053015 100.45 By MS/MS 1.5 0.5 1 1 2 1141400 1141400 0 7329 795 7599 18268;18269 12953 12953 1 55940 0 IWGTEGDSWICK AGTLLASCGGDRRIRIWGTEGDSWICKSVL RIRIWGTEGDSWICKSVLSEGHQRTVRKVA R I W C K S 0 0 0 1 1 0 1 2 0 2 0 1 0 0 0 1 1 2 0 0 0 0 12 0 1450.6551 O76071 O76071 42 53 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 2 0.015372 114.4 By MS/MS 7.5 0.5 1 1 2 767690 767690 0 7330 345 7600 18270;18271 12954 12954 0 41234 0 IWQDVQLK DRGYIKKKLEHGLTRIWQDVQLKVKTYLLG LEHGLTRIWQDVQLKVKTYLLGTDLSIFKY R I W L K V 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 8 0 1028.5655 Q96JG6 Q96JG6 387 394 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 0.024767 101.25 By MS/MS 4 0 1 1 791640 791640 0 7331 2208 7601 18272 12955 12955 1 21611 0 IWQNFDSAR PHPLLRQWVAICLGRIWQNFDSARWCGVRD AICLGRIWQNFDSARWCGVRDSAHEKLYSL R I W A R W 1 1 1 1 0 1 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 9 0 1135.5411 Q8N122 Q8N122 584 592 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.0072216 110.87 By MS/MS 3 0 1 1 381940 381940 0 7332 1891 7602 18273 12956 12956 1 9970.6 0 IWQYVYSK PMEHGIVKDWNDMERIWQYVYSKDQLQTFS DWNDMERIWQYVYSKDQLQTFSEEHPVLLT R I W S K D 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 1 2 1 0 0 8 0 1085.5546 P42025;P61163 P61163 89 96 ACTR1B;ACTR1A Beta-centractin;Alpha-centractin no no 2 0.0232 113.26 By MS/MS 7 0 1 1 1506500 1506500 0 7333 1090;843 7603 18274 12957 12957 1 26921 0 IWSVPNASCVQVVR SQDLVFSASPDATIRIWSVPNASCVQVVRA RIWSVPNASCVQVVRAHESAVTGLSLHATG R I W V R A 1 1 1 0 1 1 0 0 0 1 0 0 0 0 1 2 0 1 0 4 0 0 14 0 1613.8348 Q9UMS4 Q9UMS4 290 303 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 2.2325E-05 158.06 By MS/MS 6 0 1 1 8093400 8093400 0 7334 2834 7604 18275 12958 12958 1 63112 0 IWYLLDGK SSFSRAPQQWATFARIWYLLDGKMQPPGKL QWATFARIWYLLDGKMQPPGKLAAMASIRL R I W G K M 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 0 0 1 1 0 0 0 8 0 1006.5488 Q9BYD1 Q9BYD1 17 24 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.012352 116.9 By MS/MS 9 0 1 1 0 0 0 7335 2412 7605 18276 12959 12959 1 0 0 IYAPQGLLLTDPIER VLKKVSKYIQEQNEKIYAPQGLLLTDPIER IYAPQGLLLTDPIERGLRVIEITIYEDRGM K I Y E R G 1 1 0 1 0 1 1 1 0 2 3 0 0 0 2 0 1 0 1 0 0 0 15 0 1697.9352 Q7Z5G4 Q7Z5G4 104 118 GOLGA7 Golgin subfamily A member 7 yes yes 2 1.2868E-05 145.31 By MS/MS 10 0 1 1 406050 406050 0 7336 1799 7606 18277 12960 12960 1 431580 0 IYDALDVSLIER AWKLICDVSRQELNKIYDALDVSLIERGES LNKIYDALDVSLIERGESFYQDRMNDIVKE K I Y E R G 1 1 0 2 0 0 1 0 0 2 2 0 0 0 0 1 0 0 1 1 0 0 12 0 1405.7453 P54136 P54136 322 333 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00028464 169.58 By MS/MS 5.5 0.5 1 1 2 730830 730830 0 7337 1013 7607 18278;18279 12961 12961 1 13365 0 IYDLNKPEAEPK DSNYLLTGGQDKLLRIYDLNKPEAEPKEIS LLRIYDLNKPEAEPKEISGHTSGIKKALWC R I Y P K E 1 0 1 1 0 0 2 0 0 1 1 2 0 0 2 0 0 0 1 0 0 0 12 1 1415.7296 Q9Y3F4 Q9Y3F4 126 137 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 4.2456E-06 178.54 By MS/MS 8 0.816 1 1 1 3 6259900 6259900 0 7338 2937 7608 18280;18281;18282 12962;12963 12962 2 195310 0 IYDVEQTR KLAKFFAPKMVSEKKIYDVEQTRYKKSGLH KMVSEKKIYDVEQTRYKKSGLHFRHTDNTV K I Y T R Y 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 8 0 1022.5033 Q13576 Q13576 92 99 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.01937 107.57 By MS/MS 3 0 1 1 522390 522390 0 7339 1383 7609 18283 12964 12964 1 13637 0 IYEAQPEISR RAKSTWLNNIKLLNKIYEAQPEISRAFQTR KLLNKIYEAQPEISRAFQTREFIPLPRLLA K I Y S R A 1 1 0 0 0 1 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 10 0 1204.6088 O60287 O60287 400 409 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 2 0.0066493 102.06 By MS/MS 2 0 1 1 130260 130260 0 7340 241 7610 18284 12965 12965 1 6474.7 0 IYEFTLQR RREYRKFFRANAGKKIYEFTLQRIVQKYFL RANAGKKIYEFTLQRIVQKYFLEMKNKMPS K I Y Q R I 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 8 0 1068.5604 O43795 O43795 869 876 MYO1B Unconventional myosin-Ib yes yes 2 0.00049162 183.74 By MS/MS 3.5 0.5 1 1 2 1300900 1300900 0 7341 223 7611 18285;18286 12966 12966 1 35304 0 IYELAAGGTAVGTGLNTR QVKYAMTRIKAAMPRIYELAAGGTAVGTGL LAAGGTAVGTGLNTRIGFAEKVAAKVAALT R I Y T R I 3 1 1 0 0 0 1 4 0 1 2 0 0 0 0 0 3 0 1 1 0 0 18 0 1762.9214 P07954 P07954 269 286 FH Fumarate hydratase, mitochondrial yes yes 2 4.7055E-19 209.11 By MS/MS 7 0 1 1 1686200 1686200 0 7342 496 7612 18287 12967;12968 12967 2 30132 0 IYFLLVR YNKSKYHLKDVIVGKIYFLLVRIKIQHMEL LKDVIVGKIYFLLVRIKIQHMELQLIKKEI K I Y V R I 0 1 0 0 0 0 0 0 0 1 2 0 0 1 0 0 0 0 1 1 0 0 7 0 922.56402 Q4G0F5;O75436 O75436 195 201 VPS26B;VPS26A Vacuolar protein sorting-associated protein 26B;Vacuolar protein sorting-associated protein 26A no no 2 0.020123 126.05 By MS/MS 7 0 1 1 156230 156230 0 7343 309;1575 7613 18288 12969 12969 1 2791.8 0 IYFMAGSSR SLDQYVERMKEKQDKIYFMAGSSRKEAESS KEKQDKIYFMAGSSRKEAESSPFVERLLKK K I Y S R K 1 1 0 0 0 0 0 1 0 1 0 0 1 1 0 2 0 0 1 0 0 0 9 0 1030.4906 P14625 P14625 538 546 HSP90B1 Endoplasmin yes yes 2 0.046101 82.452 By MS/MS 4.5 0.5 1 1 2 629350 629350 0 7344 589 7614 18289;18290 12970 12970 1 18911 0 IYGADDIELLPEAQHK LKLPVEDKIRIIAQKIYGADDIELLPEAQH YGADDIELLPEAQHKAEVYTKQGFGNLPIC K I Y H K A 2 0 0 2 0 1 2 1 1 2 2 1 0 0 1 0 0 0 1 0 0 0 16 0 1810.9101 P11586 P11586 833 848 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00053498 145.23 By MS/MS 4 0 1 1 1040500 1040500 0 7345 556 7615 18291 12971 12971 1 28406 0 IYGAGQPFAER VGISREHAKIFNYGRIYGAGQPFAERLLMQ NYGRIYGAGQPFAERLLMQFNHRLTQQEAA R I Y E R L 2 1 0 0 0 1 1 2 0 1 0 0 0 1 1 0 0 0 1 0 0 0 11 0 1207.5986 P54098 P54098 954 964 POLG DNA polymerase subunit gamma-1 yes yes 2 0.0016104 125.48 By MS/MS 3 0 1 1 865360 865360 0 7346 1011 7616 18292 12972 12972 1 22590 0 IYGETPEACR GVTAIELGEETCTFRIYGETPEACRQARSY TCTFRIYGETPEACRQARSYLEFSEDSVQV R I Y C R Q 1 1 0 0 1 0 2 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1194.5339 P51116 P51116 274 283 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 0.012474 117.81 By MS/MS 4.5 0.5 1 1 2 844250 844250 0 7347 958 7617 18293;18294 12973 12973 1 28074 0 IYGLGSLALYEK AAKYARAERELKPARIYGLGSLALYEKADI PARIYGLGSLALYEKADIKGPEDKKKHLLI R I Y E K A 1 0 0 0 0 0 1 2 0 1 3 1 0 0 0 1 0 0 2 0 0 0 12 0 1325.7231 P36542 P36542 68 79 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 9.307E-24 236.35 By MS/MS By matching 8.75 0.829 2 1 1 3 1 12294000 12267000 26830 7348 805 7618 18295;18296;18297;18298 12974 12974 1 932760 228890 IYHTIAYLTPLPQPNR PSTAILHFRLFVGARIYHTIAYLTPLPQPN YHTIAYLTPLPQPNRALSFFVGYGVTLSMA R I Y N R A 1 1 1 0 0 1 0 0 1 2 2 0 0 0 3 0 2 0 2 0 0 0 16 0 1896.0258 P10620 P10620 115 130 MGST1 Microsomal glutathione S-transferase 1 yes yes 3 0.042602 60.549 By MS/MS 10 0 1 1 102250 102250 0 7349 541 7619 18299 12975 12975 1 108680 0 IYIDSNNNPER HEGCEEPATHNALAKIYIDSNNNPERFLRE ALAKIYIDSNNNPERFLRENPYYDSRVVGK K I Y E R F 0 1 3 1 0 0 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1333.6262 Q00610 Q00610 882 892 CLTC Clathrin heavy chain 1 yes yes 2 4.637E-05 169.93 By MS/MS By matching 2.67 1.49 2 1 1 1 1 5 1 5825400 5792800 32531 7350 1235 7620 18300;18301;18302;18303;18304;18305 12976;12977 12976 2 199470 32531 IYISLLK PARGYELLFQPEVVRIYISLLKESKTPAIL LFQPEVVRIYISLLKESKTPAILEASAGAI R I Y L K E 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 1 0 0 1 0 0 0 7 0 848.53714 O60716 O60716 667 673 CTNND1 Catenin delta-1 yes yes 2 0.020731 124.37 By MS/MS 4 0 1 1 581440 581440 0 7351 260 7621 18306 12978 12978 1 15873 0 IYKSDGIK GAEREFRGLGDCLVKIYKSDGIKGLYQGFN LGDCLVKIYKSDGIKGLYQGFNVSVQGIII K I Y I K G 0 0 0 1 0 0 0 1 0 2 0 2 0 0 0 1 0 0 1 0 0 0 8 1 922.51238 P05141 P05141 164 171 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.017944 145.16 By MS/MS By matching 5.53 3.3 2 2 2 1 1 3 2 2 14 1 69531000 69419000 112250 7352 469 7622 18307;18308;18309;18310;18311;18312;18313;18314;18315;18316;18317;18318;18319;18320;18321 12979;12980;12981;12982;12983;12984;12985 12985 7 5618600 957650 IYLDMLNVYK ACKAVGHPFVIQLGRIYLDMLNVYKCLSEN IQLGRIYLDMLNVYKCLSENISAAIQANGE R I Y Y K C 0 0 1 1 0 0 0 0 0 1 2 1 1 0 0 0 0 0 2 1 0 0 10 0 1270.6631 O14980 O14980 713 722 XPO1 Exportin-1 yes yes 2 0.00033854 149.57 By MS/MS 3.67 0.471 1 2 3 1633300 1633300 0 7353 142 7623;7624 18322;18323;18324 12986;12987 12986 88 2 44495 0 IYNNIPANLR AKKVLSVAVYNHYKRIYNNIPANLRQQAEV NHYKRIYNNIPANLRQQAEVEKQTSLTPRE R I Y L R Q 1 1 3 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1186.6459 O76031 O76031 201 210 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.0043923 119.41 By MS/MS By matching 5.67 0.471 1 2 2 1 11694000 11649000 44221 7354 344 7625 18325;18326;18327 12988;12989 12988 2 284180 135620 IYQDAYR RIAQRWRELPDSKKKIYQDAYRAEWQVYKE ELPDSKKKIYQDAYRAEWQVYKEEISRFKE K I Y Y R A 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 7 0 927.44503 Q00059 Q00059 98 104 TFAM Transcription factor A, mitochondrial yes yes 2 0.016561 135.84 By MS/MS By matching 9.33 0.471 2 1 2 1 4699700 4633700 65950 7355 1229 7626 18328;18329;18330 12990 12990 1 2693700 710760 IYQDERER AMQNFLNLPEVERDRIYQDERERSMNPNVS PEVERDRIYQDERERSMNPNVSMVSSASSS R I Y E R S 0 2 0 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 8 1 1107.5309 Q9UPW6;Q01826 Q9UPW6 432 439 SATB2;SATB1 DNA-binding protein SATB2;DNA-binding protein SATB1 yes no 2 0.021729 150.4 By MS/MS 4 0 1 1 137780 137780 0 7356 1247 7627 18331 12991 12991 1 3761.3 0 IYQIYEGTSQIQR FNTEYPVEKLMRDAKIYQIYEGTSQIQRLI AKIYQIYEGTSQIQRLIVAREHIDKYKN__ K I Y Q R L 0 1 0 0 0 3 1 1 0 3 0 0 0 0 0 1 1 0 2 0 0 0 13 0 1597.81 P11310 P11310 396 408 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 1.4051E-35 312.78 By MS/MS 8.5 1.12 1 1 1 1 4 19056000 19056000 0 7357 552 7628 18332;18333;18334;18335 12992;12993 12993 2 741020 0 IYQVLDFR WIRFGYDPRKNPDAKIYQVLDFRIRCGMKH RKNPDAKIYQVLDFRIRCGMKHGYAPSDLP K I Y F R I 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1052.5655 Q9Y5Q8 Q9Y5Q8 315 322 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 2 0.0053417 135.83 By MS/MS 6 0.816 1 1 1 3 2095600 2095600 0 7358 2977 7629 18336;18337;18338 12994 12994 1 22599 0 IYQYVINK LDIRLTKDNNLTTGKIYQYVINKERKGDYL NNLTTGKIYQYVINKERKGDYLGKTVQVVP K I Y N K E 0 0 1 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 8 0 1039.5702 P17812 P17812 93 100 CTPS1 CTP synthase 1 yes yes 2 0.0094109 120.65 By MS/MS 5 0 1 1 1999100 1999100 0 7359 615 7630 18339 12995 12995 1 82170 0 IYSFGLGGR RTSDLGKSFKTIGVKIYSFGLGGRFLFASV KTIGVKIYSFGLGGRFLFASVMADKDTTRR K I Y G R F 0 1 0 0 0 0 0 3 0 1 1 0 0 1 0 1 0 0 1 0 0 0 9 0 968.50797 Q99523 Q99523 303 311 SORT1 Sortilin yes yes 2 0.004934 122.74 By MS/MS 4 0 1 1 0 0 0 7360 2271 7631 18340 12996 12996 1 0 0 IYSNNQYAR NKFDLVSFIPLLRERIYSNNQYARQFIISW PLLRERIYSNNQYARQFIISWILVLESVPD R I Y A R Q 1 1 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 0 9 0 1127.536 Q08AM6 Q08AM6 184 192 VAC14 Protein VAC14 homolog yes yes 2 0.00079241 146.79 By MS/MS 5.5 0.5 1 1 2 3082500 3082500 0 7361 1294 7632 18341;18342 12997 12997 1 74307 0 IYSTLAGTR NGFNSLLNNMELIRKIYSTLAGTRKDVEVT MELIRKIYSTLAGTRKDVEVTKEEFVLAAQ K I Y T R K 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 1 2 0 1 0 0 0 9 0 980.5291 Q9UJS0;O75746 Q9UJS0 236 244 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 0.00071506 148.52 By MS/MS 6 0.816 1 1 1 3 19844000 19844000 0 7362 2798;327 7633 18343;18344;18345 12998;12999 12998 2 725290 0 IYSVEALPVAAVNVQSTQ DKLEMEDAVTFLKTKIYSVEALPVAAVNVQ VEALPVAAVNVQSTQ_______________ K I Y T Q - 3 0 1 0 0 2 1 0 0 1 1 0 0 0 1 2 1 0 1 4 0 0 18 0 1887.9942 Q9NYY8 Q9NYY8 693 710 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 3.8967E-11 206.45 By MS/MS 6 0 1 1 2736000 2736000 0 7363 2701 7634 18346 13000 13000 1 21335 0 IYSYVVSRPQPR PPPSRPLQVNTADHRIYSYVVSRPQPRGLL DHRIYSYVVSRPQPRGLLGWGYYLIMLPFR R I Y P R G 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 2 2 0 0 12 1 1463.7885 Q96CS3 Q96CS3 78 89 FAF2 FAS-associated factor 2 yes yes 2;3 0.015912 120.27 By MS/MS 6 0 2 2 41327000 41327000 0 7364 2140 7635 18347;18348 13001;13002 13002 2 322270 0 IYTDAGR SEVSMIRDIREREIRIYTDAGRICRPLLIV DIREREIRIYTDAGRICRPLLIVEKQKLLL R I Y G R I 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 7 0 794.39227 P30876 P30876 614 620 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.049192 101.69 By MS/MS 3 0 1 1 636420 636420 0 7365 748 7636 18349 13003 13003 1 16614 0 IYVDDGLISLQVK LDYKNICKVVEVGSKIYVDDGLISLQVKQK SKIYVDDGLISLQVKQKGADFLVTEVENGG K I Y V K Q 0 0 0 2 0 1 0 1 0 2 2 1 0 0 0 1 0 0 1 2 0 0 13 0 1461.8079 P14618 P14618 174 186 PKM Pyruvate kinase PKM yes yes 2 2.8491E-35 267.39 By MS/MS 6.33 0.471 2 1 3 23191000 23191000 0 7366 588 7637 18350;18351;18352 13004;13005 13005 2 181340 0 IYVEIER KLRLIDTLRMVTEGKIYVEIERARLTKTLA LRMVTEGKIYVEIERARLTKTLATIKEQNG K I Y E R A 0 1 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 7 0 920.49673 O00232 O00232 136 142 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.049261 101.64 By MS/MS By matching 6 0 2 1 1 14519000 14499000 20108 7367 81 7638 18353;18354 13006 13006 1 113060 61668 IYVENLIDCLNEK SSNQALNCKFYKSMKIYVENLIDCLNEKII MKIYVENLIDCLNEKIINIQEIESSMHALL K I Y E K I 0 0 2 1 1 0 2 0 0 2 2 1 0 0 0 0 0 0 1 1 0 0 13 0 1621.8022 P16383 P16383 328 340 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 2 1.7278E-07 216.84 By MS/MS 4 0 1 1 190710 190710 0 7368 606 7639 18355 13007 13007 1 5206.3 0 IYVGNASVAQDIPK CYSLPSQPCNEVTPRIYVGNASVAQDIPKL RIYVGNASVAQDIPKLQKLGITHVLNAAEG R I Y P K L 2 0 1 1 0 1 0 1 0 2 0 1 0 0 1 1 0 0 1 2 0 0 14 0 1473.7827 P51452 P51452 37 50 DUSP3 Dual specificity protein phosphatase 3 yes yes 2 5.8794E-08 210.15 By MS/MS 8.5 1.12 1 1 1 1 4 1584200 1584200 0 7369 964 7640 18356;18357;18358;18359 13008;13009 13009 2 428340 0 IYVISLAEPR IGSCTQQDVELHVQKIYVISLAEPRLPLQL LHVQKIYVISLAEPRLPLQLDDAVRPEAEG K I Y P R L 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1159.6601 P14868 P14868 142 151 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.00016934 157.91 By MS/MS By MS/MS 5.1 2.47 1 1 1 1 1 2 1 1 1 9 1 11803000 11803000 0 7370 594 7641 18360;18361;18362;18363;18364;18365;18366;18367;18368;18369 13010;13011;13012;13013 13012 3 144730 0 KAAAPAPEEEMDECEQALAAEPK REEKQKPQAERKEEKKAAAPAPEEEMDECE EEMDECEQALAAEPKAKDPFAHLPKSTFVL K K A P K A 7 0 0 1 1 1 6 0 0 0 1 2 1 0 3 0 0 0 0 0 0 0 23 1 2484.1149 P26641 P26641 253 275 EEF1G Elongation factor 1-gamma yes yes 3 0.00022476 84.573 By MS/MS 6.5 0.5 1 1 2 7733200 7733200 0 7371 700 7642 18370;18371 13014;13015 13015 2 77891 0 KAAIISAEGDSK AERARFVVEKAEQQKKAAIISAEGDSKAAE QQKKAAIISAEGDSKAAELIANSLATAGDG K K A S K A 3 0 0 1 0 0 1 1 0 2 0 2 0 0 0 2 0 0 0 0 0 0 12 1 1188.635 P35232 P35232 208 219 PHB Prohibitin yes yes 2;3 0.0013865 145.23 By MS/MS By matching 8 0 3 2 1 3775200 3732800 42387 7372 782 7643 18372;18373;18374 13016;13017 13016 2 246250 361620 KAALSASEGEEVPQDK ERISGLGLTPEQKQKKAALSASEGEEVPQD AALSASEGEEVPQDKAPSHVPFLLIGGGTA K K A D K A 3 0 0 1 0 1 3 1 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1657.8159 O95831 O95831 112 127 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.029598 59.733 By MS/MS 5 0 1 1 2713200 2713200 0 7373 409 7644 18375 13018 13018 1 111520 0 KAASLTEDR EERSRERPSQPEGLRKAASLTEDRDRGRDA QPEGLRKAASLTEDRDRGRDAVKREAALPP R K A D R D 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 9 1 989.51417 Q04637 Q04637 1206 1214 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0092143 125.71 By MS/MS 2 0 1 1 497870 497870 0 7374 1264 7645 18376 13019 13019 1 24747 0 KAASLTEDRDR EERSRERPSQPEGLRKAASLTEDRDRGRDA EGLRKAASLTEDRDRGRDAVKREAALPPVS R K A D R G 2 2 0 2 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 11 2 1260.6422 Q04637 Q04637 1206 1216 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00011423 174.86 By MS/MS 2.5 0.957 1 2 2 1 6 5930100 5930100 0 7375 1264 7646 18377;18378;18379;18380;18381;18382 13020;13021 13021 2 282900 0 KAAWEAYLSR IISAADRLEAAEMYRKAAWEAYLSRLGV__ AEMYRKAAWEAYLSRLGV____________ R K A S R L 3 1 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 0 0 10 1 1193.6193 P11172 P11172 468 477 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 0.026142 107.11 By MS/MS 6 0 1 1 2108100 2108100 0 7376 548 7647 18383 13022 13022 1 16439 0 KACQIFVR GSFGGAGGHAPGVARKACQIFVRNLPFDFT HAPGVARKACQIFVRNLPFDFTWKMLKDKF R K A V R N 1 1 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 8 1 1020.5539 P52272 P52272 651 658 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0025698 179.16 By MS/MS 5 0 1 1 2607200 2607200 0 7377 982 7648 18384 13023 13023 1 107170 0 KACTYIR IVGLSSLGAQVPDAKKACTYIRSNLDPSNV GAQVPDAKKACTYIRSNLDPSNVDSLFYAA K K A I R S 1 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 7 1 910.46947 P04844 P04844 70 76 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.045145 158.36 By MS/MS 1.5 0.5 1 1 2 947850 947850 0 7378 459 7649 18385;18386 13024 13024 1 46581 0 KADEVLEILK RQLSRFYDDAIVSQKKADEVLEILKTASDD IVSQKKADEVLEILKTASDDRECENQLVLL K K A L K T 1 0 0 1 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1156.6703 O75643 O75643 285 294 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0023183 141.1 By MS/MS 2 0.816 1 1 1 3 1339400 1339400 0 7379 322 7650 18387;18388;18389 13025 13025 1 60368 0 KADIDLTK AIKGVGRRYAHVVLRKADIDLTKRAGELTE YAHVVLRKADIDLTKRAGELTEDEVERVIT R K A T K R 1 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 902.5073 P62269 P62269 47 54 RPS18 40S ribosomal protein S18 yes yes 2 0.0022217 181.55 By MS/MS 9.5 0.5 1 1 2 6489000 6489000 0 7380 1124 7651 18390;18391 13026;13027 13026 2 4668700 0 KADIDLTKR AIKGVGRRYAHVVLRKADIDLTKRAGELTE AHVVLRKADIDLTKRAGELTEDEVERVITI R K A K R A 1 1 0 2 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 9 2 1058.6084 P62269 P62269 47 55 RPS18 40S ribosomal protein S18 yes yes 2;3 0.0028557 151.83 By MS/MS 9.5 0.5 2 2 4 6188500 6188500 0 7381 1124 7652 18392;18393;18394;18395 13028;13029;13030 13030 3 4307700 0 KADIGVAMGIAGSDVSK VAVTGDGVNDSPALKKADIGVAMGIAGSDV DIGVAMGIAGSDVSKQAADMILLDDNFASI K K A S K Q 3 0 0 2 0 0 0 3 0 2 0 2 1 0 0 2 0 0 0 2 0 0 17 1 1617.8396 P05023;P13637 P05023 727 743 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 4.056E-06 143.14 By MS/MS 2.5 1.12 1 1 1 1 4 1443300 1443300 0 7382 463;575 7653 18396;18397;18398;18399 13031;13032 13031 247 2 53169 0 KADKVEQR QLAVNKIKEIAVTVKKADKVEQRKLLEKCA EIAVTVKKADKVEQRKLLEKCAMTALSSKL K K A Q R K 1 1 0 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 8 2 972.53524 Q99832 Q99832 145 152 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.015306 159.28 By MS/MS By matching 4.8 2.14 1 1 1 1 1 3 1 1 9 1 76101000 76093000 7238.9 7383 2295 7654 18400;18401;18402;18403;18404;18405;18406;18407;18408;18409 13033;13034;13035;13036;13037 13033 5 612490 22201 KADNVVNIAR CPLEQLLQGINPRTKKADNVVNIARYLYHG NPRTKKADNVVNIARYLYHGNTNPELAFES K K A A R Y 2 1 2 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 10 1 1098.6146 Q92621 Q92621 892 901 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0014113 150.27 By MS/MS 1.5 0.5 1 1 2 468940 468940 0 7384 2070 7655 18410;18411 13038 13038 1 23261 0 KADVIVLAGTVCDFR NHPLHIRENRSAALKKADVIVLAGTVCDFR KADVIVLAGTVCDFRLSYGRVLSHSSKIII K K A F R L 2 1 0 2 1 0 0 1 0 1 1 1 0 1 0 0 1 0 0 3 0 0 15 1 1662.8763 A1L0T0 A1L0T0 343 357 ILVBL Acetolactate synthase-like protein yes yes 3 0.0049346 84.41 By MS/MS 6 0 1 1 2151400 2151400 0 7385 8 7656 18412 13039 13039 1 16777 0 KAEAGAGSATEFQFR RDTYRRSAVPPGADKKAEAGAGSATEFQFR KAEAGAGSATEFQFRGGFGRGRGQPPQ___ K K A F R G 4 1 0 0 0 1 2 2 0 0 0 1 0 2 0 1 1 0 0 0 0 0 15 1 1568.7583 P46783;Q9NQ39 P46783 139 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2;3 2.3411E-62 295.29 By MS/MS 9 0 2 2 10377000 10377000 0 7386 889 7657 18413;18414 13040;13041 13041 2 5955500 0 KAEALEAAIENLNEAK AKCQVASAASYDQPKKAEALEAAIENLNEA AEALEAAIENLNEAKNYFAKVDCKERIRDV K K A A K N 5 0 2 0 0 0 4 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 16 1 1712.8945 Q9UJX4 Q9UJX4 683 698 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2;3 8.9624E-07 160.46 By MS/MS 5.33 0.471 2 1 3 2073500 2073500 0 7387 2804 7658 18415;18416;18417 13042;13043 13043 2 76276 0 KAEAQIAAK YRDDNGKPYVLPSVRKAEAQIAAKNLDKEY VLPSVRKAEAQIAAKNLDKEYLPIGGLAEF R K A A K N 4 0 0 0 0 1 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 928.53418 P00505 P00505 82 90 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 5.5858E-06 190.62 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 4400300 4382400 17883 7388 430 7659 18418;18419;18420;18421;18422 13044;13045 13044 2 212940 73413 KAEEELGELEAK YDTRKSRLELQKDVRKAEEELGELEAKLNE DVRKAEEELGELEAKLNENLRRNIERINNE R K A A K L 2 0 0 0 0 0 5 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 12 1 1344.6773 Q9UQE7 Q9UQE7 684 695 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2;3 0.00025592 162.49 By MS/MS 2.67 0.471 1 2 3 3269000 3269000 0 7389 2860 7660 18423;18424;18425 13046;13047 13047 2 87433 0 KAEEIANEMIEAAK FDFTAKGAMSTQQIKKAEEIANEMIEAAKA KKAEEIANEMIEAAKAVYTQDCPLAAAKAI K K A A K A 4 0 1 0 0 0 4 0 0 2 0 2 1 0 0 0 0 0 0 0 0 0 14 1 1545.7709 P49588 P49588 651 664 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 8.8463E-06 174.94 By MS/MS 4 0 1 1 1228400 1228400 0 7390 921 7661 18426 13048 13048 1 33534 0 KAEEKYEVLENK EESEETLKNTKEIQRKAEEKYEVLENKMKN IQRKAEEKYEVLENKMKNAEAERERELKDA R K A N K M 1 0 1 0 0 0 4 0 0 0 1 3 0 0 0 0 0 0 1 1 0 0 12 2 1478.7617 O95347 O95347 768 779 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.0010906 105.95 By MS/MS 3 0 1 1 0 0 0 7391 385 7662 18427 13049 13049 1 0 0 KAEELDRR AATAELLKKQEELNRKAEELDRRERELQHA KQEELNRKAEELDRRERELQHAALGGTATR R K A R R E 1 2 0 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1015.5411 O14828 O14828 109 116 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 3 0.012985 118.74 By MS/MS 8 0.816 1 1 1 3 3719000 3719000 0 7392 130 7663 18428;18429;18430 13050 13050 1 307830 0 KAEIGIAMGSGTAVAK TAMTGDGVNDAPALKKAEIGIAMGSGTAVA AEIGIAMGSGTAVAKTASEMVLADDNFSTI K K A A K T 4 0 0 0 0 0 1 3 0 2 0 2 1 0 0 1 1 0 0 1 0 0 16 1 1502.8127 P16615;O14983;Q93084 P16615 712 727 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 3 0.0039441 114.54 By MS/MS 2.5 1.12 1 1 1 1 4 3315300 3315300 0 7393 608 7664 18431;18432;18433;18434 13051;13052;13053 13053 391 3 131210 0 KAEIMESIKR GDARIDRQESSRQQRKAEIMESIKRLYPGS SRQQRKAEIMESIKRLYPGSVYGRLIDLCQ R K A K R L 1 1 0 0 0 0 2 0 0 2 0 2 1 0 0 1 0 0 0 0 0 0 10 2 1203.6645 Q14683 Q14683 500 509 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.027853 85.963 By MS/MS 3 0 1 1 325930 325930 0 7394 1440 7665 18435 13054 13054 1131 1 8508.5 0 KAFSGYLGTDQSK AFAPICNPVLCPWGKKAFSGYLGTDQSKWK GKKAFSGYLGTDQSKWKAYDATHLVKSYPG K K A S K W 1 0 0 1 0 1 0 2 0 0 1 2 0 1 0 2 1 0 1 0 0 0 13 1 1400.6936 P10768 P10768 186 198 ESD S-formylglutathione hydrolase yes yes 2 0.00036787 183.06 By MS/MS 8 0 1 1 979190 979190 0 7395 543 7666 18436 13055 13055 1 64597 0 KAHEILPNLVCCSAK LSVSEVIEGYEIACRKAHEILPNLVCCSAK KAHEILPNLVCCSAKNLRDIDEVSSLLRTS R K A A K N 2 0 1 0 2 0 1 0 1 1 2 2 0 0 1 1 0 0 0 1 0 0 15 1 1738.8858 P50990 P50990 138 152 CCT8 T-complex protein 1 subunit theta yes yes 2;3 7.3601E-14 217.12 By MS/MS 6.2 0.748 1 2 2 5 85819000 85819000 0 7396 955 7667 18437;18438;18439;18440;18441 13056;13057 13057 2 694090 0 KALDDMISTLKK LEQQMHPTVVISAYRKALDDMISTLKKISI AYRKALDDMISTLKKISIPVDISDSDMMLN R K A K K I 1 0 0 2 0 0 0 0 0 1 2 3 1 0 0 1 1 0 0 0 0 0 12 2 1361.7588 P49368 P49368 128 139 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.00052423 133.15 By MS/MS 6 0.707 1 2 1 4 8298300 8298300 0 7397 916 7668;7669 18442;18443;18444;18445 13058;13059 13059 673 2 75884 0 KAPKEDVDAAVK RVAVQGDVVRELKAKKAPKEDVDAAVKQLL KAKKAPKEDVDAAVKQLLSLKAEYKEKTGQ K K A V K Q 3 0 0 2 0 0 1 0 0 0 0 3 0 0 1 0 0 0 0 2 0 0 12 2 1269.6929 P07814 P07814 771 782 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.0027567 134.75 By MS/MS 3.5 0.5 2 2 4 4151800 4151800 0 7398 493 7670 18446;18447;18448;18449 13060;13061;13062 13060 3 109500 0 KAPSEASAQEQR GEVVEQKRAPGKQPRKAPSEASAQEQREKQ QPRKAPSEASAQEQREKQPLEESASRAPST R K A Q R E 3 1 0 0 0 2 2 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 12 1 1300.6371 Q9HC36 Q9HC36 60 71 RNMTL1 rRNA methyltransferase 3, mitochondrial yes yes 2 0.00026579 161.93 By MS/MS By matching 6 0 2 1 1 6277600 6230000 47566 7399 2558 7671 18450;18451 13063 13063 1 48582 145880 KAQDEGLLSDVVPFKVPGK LEQDEYALRSHSLAKKAQDEGLLSDVVPFK EGLLSDVVPFKVPGKDTVTKDNGIRPSSLE K K A G K D 1 0 0 2 0 1 1 2 0 0 2 3 0 1 2 1 0 0 0 3 0 0 19 2 2026.1099 P55084 P55084 254 272 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 3 0.0030135 87.24 By MS/MS 6.5 0.5 1 1 2 3099500 3099500 0 7400 1027 7672 18452;18453 13064 13064 1 26182 0 KAQPAQPADEPAEKADEPMEH DVSPFLEGLEERPQRKAQPAQPADEPAEKA PADEPAEKADEPMEH_______________ R K A E H - 5 0 0 2 0 2 4 0 1 0 0 2 1 0 4 0 0 0 0 0 0 0 21 2 2288.0379 P25786 P25786 243 263 PSMA1 Proteasome subunit alpha type-1 yes yes 3 0.00034139 102.79 By MS/MS 8 0 1 1 838570 838570 0 7401 688 7673 18454 13065 13065 1 55320 0 KAREEHER KREEREIKERIERVKKAREEHERAQREEEA ERIERVKKAREEHERAQREEEARRQSGAQY K K A E R A 1 2 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 8 2 1053.5316 P50502 P50502 256 263 ST13 Hsc70-interacting protein yes yes 2 0.034298 141.52 By MS/MS 6 0 1 1 104270 104270 0 7402 948 7674 18455 13066 13066 1 813.06 0 KASAAQLR KKEEESAGGTKGSSKKASAAQLRIQKDINE GTKGSSKKASAAQLRIQKDINELNLPKTCD K K A L R I 3 1 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 1 843.49265 P61081 P61081 26 33 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.011565 150.05 By MS/MS 9.5 0.5 1 1 2 1188200 1188200 0 7403 1086 7675 18456;18457 13067 13067 1 773510 0 KASDVHEVR GVEQDVDMVFASFIRKASDVHEVRKVLGEK FASFIRKASDVHEVRKVLGEKGKNIKIISK R K A V R K 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 9 1 1039.5411 P14618 P14618 247 255 PKM Pyruvate kinase PKM yes yes 2;3 0.00039401 170.5 By MS/MS 4.71 2.49 1 1 1 2 1 1 7 11881000 11881000 0 7404 588 7676 18458;18459;18460;18461;18462;18463;18464 13068;13069;13070;13071 13070 4 126780 0 KASDVHEVRK GVEQDVDMVFASFIRKASDVHEVRKVLGEK ASFIRKASDVHEVRKVLGEKGKNIKIISKI R K A R K V 1 1 0 1 0 0 1 0 1 0 0 2 0 0 0 1 0 0 0 2 0 0 10 2 1167.636 P14618 P14618 247 256 PKM Pyruvate kinase PKM yes yes 2;3 0.017924 114.89 By MS/MS 6.5 0.957 1 2 2 1 6 6483100 6483100 0 7405 588 7677 18465;18466;18467;18468;18469;18470 13072;13073 13073 2 60094 0 KAVLGSSPFLSEANAER EVAKKSLRSEDPSGKKAVLGSSPFLSEANA VLGSSPFLSEANAERIVRTLCKVRGAALKL K K A E R I 3 1 1 0 0 0 2 1 0 0 2 1 0 1 1 3 0 0 0 1 0 0 17 1 1774.9214 Q8NI60 Q8NI60 246 262 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 1.0096E-06 155.09 By MS/MS 6 0 1 1 1677900 1677900 0 7406 1978 7678 18471 13074 13074 1 13085 0 KAVLVALK NVPPPFLGLPRFEARKAVLVALKERGLFRG LPRFEARKAVLVALKERGLFRGIEDNPMVV R K A L K E 2 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 2 0 0 8 1 840.57967 P26640 P26640 638 645 VARS Valine--tRNA ligase yes yes 2 0.006957 160.03 By MS/MS 4 0.816 1 1 1 3 1079300 1079300 0 7407 699 7679 18472;18473;18474 13075 13075 1 29015 0 KAYLPQELLGK IVSALSQTGSLFKPRKAYLPQELLGKEGFD FKPRKAYLPQELLGKEGFDALDPFIPILVS R K A G K E 1 0 0 0 0 1 1 1 0 0 3 2 0 0 1 0 0 0 1 0 0 0 11 1 1258.7285 P51398 P51398 321 331 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0066739 123.96 By MS/MS 7 0 1 1 5143800 5143800 0 7408 963 7680 18475 13076 13076 1 91922 0 KAYYQLAK QILGVPRNASQKEIKKAYYQLAKKYHPDTN ASQKEIKKAYYQLAKKYHPDTNKDDPKAKE K K A A K K 2 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 0 2 0 0 0 8 1 983.54402 Q96EY1 Q96EY1 111 118 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.0027806 177.71 By MS/MS 7 0 1 1 9362600 9362600 0 7409 2169 7681 18476 13077 13077 1 167310 0 KCAHILTK LQEARVFNETPINPRKCAHILTKILYLINQ ETPINPRKCAHILTKILYLINQGEHLGTTE R K C T K I 1 0 0 0 1 0 0 0 1 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 969.54297 Q9Y678 Q9Y678 43 50 COPG1 Coatomer subunit gamma-1 yes yes 3 0.0099352 111.74 By MS/MS 4 0 1 1 690080 690080 0 7410 2996 7682 18477 13078 13078 1 18839 0 KCEQVLIEK VQVYLHESTQDELARKCEQVLIEKHLEIFH QDELARKCEQVLIEKHLEIFHTEFQNLLDA R K C E K H 0 0 0 0 1 1 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1145.6114 Q13616 Q13616 290 298 CUL1 Cullin-1 yes yes 2 0.01043 122.33 By MS/MS 5 0.816 1 1 1 3 2356000 2356000 0 7411 1387 7683 18478;18479;18480 13079;13080 13079 2 67385 0 KCNTDQAGRPK NIAMRPGLEGYALPRKCNTDQAGRPKCPLD ALPRKCNTDQAGRPKCPLDPYFIMPDKCKC R K C P K C 1 1 1 1 1 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 11 2 1273.6197 P33992 P33992 196 206 MCM5 DNA replication licensing factor MCM5 yes yes 3 0.035501 78.488 By MS/MS 5 0 1 1 174410 174410 0 7412 774 7684 18481 13081 13081 1 7169 0 KDAHSNLLAK DSWLKSLFVRKVDPRKDAHSNLLAKKETSN KVDPRKDAHSNLLAKKETSNLYKLQFHNVK R K D A K K 2 0 1 1 0 0 0 0 1 0 2 2 0 0 0 1 0 0 0 0 0 0 10 1 1095.6037 O75323 O75323 58 67 GBAS Protein NipSnap homolog 2 yes yes 2;3 2.0397E-06 188.91 By MS/MS 8 0 2 2 41280000 41280000 0 7413 296 7685 18482;18483 13082;13083 13083 2 2723200 0 KDAHSTLLSK GSWFRSLFVHKVDPRKDAHSTLLSKKETSN KVDPRKDAHSTLLSKKETSNLYKIQFHNVK R K D S K K 1 0 0 1 0 0 0 0 1 0 2 2 0 0 0 2 1 0 0 0 0 0 10 1 1098.6033 Q9BPW8 Q9BPW8 56 65 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 0.0004204 164.66 By MS/MS 8 0 1 1 12042000 12042000 0 7414 2301 7686 18484 13084 13084 1 794380 0 KDAHSTLLSKK GSWFRSLFVHKVDPRKDAHSTLLSKKETSN VDPRKDAHSTLLSKKETSNLYKIQFHNVKP R K D K K E 1 0 0 1 0 0 0 0 1 0 2 3 0 0 0 2 1 0 0 0 0 0 11 2 1226.6983 Q9BPW8 Q9BPW8 56 66 NIPSNAP1 Protein NipSnap homolog 1 yes yes 3 0.00018935 155.33 By MS/MS 8 0 1 1 1619800 1619800 0 7415 2301 7687 18485 13085 13085 1 106860 0 KDEEVLKK PSVKVSVFFGGLSIKKDEEVLKKNCPHVVV FGGLSIKKDEEVLKKNCPHVVVGTPGRILA K K D K K N 0 0 0 1 0 0 2 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 8 2 987.56006 O00148;Q13838 O00148 155 162 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 3 0.013193 107.69 By MS/MS 6 0 1 1 1017900 1017900 0 7416 70 7688 18486 13086 13086 1 7937.5 0 KDGLVSLLTTSEGADEPQR PMALELMTVLVGSPRKDGLVSLLTTSEGAD VSLLTTSEGADEPQRLQFPLPTAQRSLEPG R K D Q R L 1 1 0 2 0 1 2 2 0 0 3 1 0 0 1 2 2 0 0 1 0 0 19 1 2015.0171 P51570 P51570 69 87 GALK1 Galactokinase yes yes 2;3 1.9072E-43 252.25 By MS/MS 7 0 2 2 2849700 2849700 0 7417 967 7689 18487;18488 13087;13088 13088 2 50924 0 KDISENKR RMVNHFIAEFKRKHKKDISENKRAVRRLRT EFKRKHKKDISENKRAVRRLRTACERAKRT K K D K R A 0 1 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 8 2 988.53016 P11142 P11142 251 258 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.047855 135.79 By MS/MS 5.5 0.5 1 1 2 739910 739910 0 7418 546 7690 18489;18490 13089 13089 1 23730 0 KDISQNKR RLVNHFVEEFKRKHKKDISQNKRAVRRLRT EFKRKHKKDISQNKRAVRRLRTACERAKRT K K D K R A 0 1 1 1 0 1 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 8 2 987.54614 P0DMV9;P0DMV8 P0DMV9 251 258 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.024454 150.36 By MS/MS 5 0 1 1 455330 455330 0 7419 528 7691 18491 13090 13090 1 18716 0 KDPSKNQGGGLSSSGAGEGQGPK SEKQNKPQKQNDGQRKDPSKNQGGGLSSSG GGLSSSGAGEGQGPKKQTRLGLEAKKEENL R K D P K K 1 0 1 1 0 2 1 7 0 0 1 3 0 0 2 4 0 0 0 0 0 0 23 2 2142.0301 P07814 P07814 987 1009 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3;4 0.0016952 77.689 By MS/MS By matching 3.33 0.471 4 2 4 2 4131400 4110700 20709 7420 493 7692 18492;18493;18494;18495;18496;18497 13091;13092;13093 13091 3 107840 29681 KDQYFLDKK IDKEEVSLRRVIGAKKDQYFLDKKMVTKND RVIGAKKDQYFLDKKMVTKNDVMNLLESAG K K D K K M 0 0 0 2 0 1 0 0 0 0 1 3 0 1 0 0 0 0 1 0 0 0 9 2 1183.6237 Q9UQE7 Q9UQE7 106 114 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0015955 110.53 By MS/MS 3 0 1 1 885580 885580 0 7421 2860 7693 18498 13094 13094 1 23118 0 KDSETGENIR KLKEEISKMRELLARKDSETGENIRQAASS ELLARKDSETGENIRQAASSLQQASLKLFE R K D I R Q 0 1 1 1 0 0 2 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 10 1 1147.5469 P38646 P38646 625 634 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 8.216E-07 192.91 By MS/MS By MS/MS 5.25 0.433 3 1 3 1 3268200 3119000 149210 7422 820 7694 18499;18500;18501;18502 13095;13096;13097;13098 13098 4 55355 441510 KDVDGAYMTK INKRTNAENEFVTIKKDVDGAYMTKVDLQA FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K K D T K V 1 0 0 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 1 1 0 0 10 1 1126.5329 P04264;CON__P04264 P04264 289 298 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.00052229 157.78 By MS/MS 3.83 2.11 1 1 1 1 1 1 6 392460 0 392460 + 7423 450;45 7695 18503;18504;18505;18506;18507;18508 13099 13099 26 1 0 867700 KDVEVTKEEFVLAAQK MELIRKIYSTLAGTRKDVEVTKEEFVLAAQ DVEVTKEEFVLAAQKFGQVTPMEVDILFQL R K D Q K F 2 0 0 1 0 1 3 0 0 0 1 3 0 1 0 0 1 0 0 3 0 0 16 2 1832.9884 Q9UJS0 Q9UJS0 245 260 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 3 1.6865E-07 159.41 By MS/MS 5.5 0.5 1 1 2 10868000 10868000 0 7424 2798 7696 18509;18510 13100 13100 1 410910 0 KDWDDDQND IMAKPAGGPKPPSGKKDWDDDQND______ KPPSGKKDWDDDQND_______________ K K D N D - 0 0 1 5 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 9 1 1149.4211 P50990 P50990 540 548 CCT8 T-complex protein 1 subunit theta yes yes 2 1.8708E-16 249.69 By MS/MS By matching 6 0 2 1 1 16069000 16054000 15042 7425 955 7697 18511;18512 13101 13101 1 125190 46133 KDYNEAYNYYTK EAETFKEQGNAYYAKKDYNEAYNYYTKAID YAKKDYNEAYNYYTKAIDMCPKNASYYGNR K K D T K A 1 0 2 1 0 0 1 0 0 0 0 2 0 0 0 0 1 0 4 0 0 0 12 1 1570.694 Q99615 Q99615 42 53 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 4.9209E-43 273.44 By MS/MS 6 0 1 1 4793900 4793900 0 7426 2276 7698 18513 13102 13102 1 37383 0 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK TEGAELMESVMDVVRKEAESCDCLQGFQLT GGGTGSGMGTLLLSKIREEYPDRIINTFSI R K E S K I 1 0 0 1 2 2 2 7 1 0 6 2 1 1 0 4 3 0 0 0 0 0 33 1 3438.6218 Q3ZCM7 Q3ZCM7 122 154 TUBB8 Tubulin beta-8 chain yes yes 4 0.011044 41.174 By MS/MS 6 0 1 1 8899100 8899100 0 7427 1572 7699 18514 13103 13103 1 69395 0 KEAESSPFVER KEKQDKIYFMAGSSRKEAESSPFVERLLKK GSSRKEAESSPFVERLLKKGYEVIYLTEPV R K E E R L 1 1 0 0 0 0 3 0 0 0 0 1 0 1 1 2 0 0 0 1 0 0 11 1 1277.6252 P14625 P14625 547 557 HSP90B1 Endoplasmin yes yes 2;3 8.8946E-06 176.6 By MS/MS 4 0 2 2 1490200 1490200 0 7428 589 7700 18515;18516 13104;13105 13105 2 40681 0 KEAPPMEKPEVVK RRKQHSLLKRLRKAKKEAPPMEKPEVVKTH AKKEAPPMEKPEVVKTHLRDMIILPEMVGS K K E V K T 1 0 0 0 0 0 3 0 0 0 0 3 1 0 3 0 0 0 0 2 0 0 13 2 1480.796 P62841 P62841 65 77 RPS15 40S ribosomal protein S15 yes yes 3 0.011657 96.371 By MS/MS 9.5 0.5 1 1 2 325790 325790 0 7429 1148 7701 18517;18518 13106 13106 1 215940 0 KEDAENLAAAQR IQTIDNIVFFPATSKKEDAENLAAAQRDAV TSKKEDAENLAAAQRDAVDFDVRVDTQDQG K K E Q R D 4 1 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 12 1 1314.6528 Q9Y6D6 Q9Y6D6 1643 1654 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.039586 96.756 By MS/MS 2.5 0.5 1 1 2 203790 203790 0 7430 3003 7702 18519;18520 13107 13107 1 8637.5 0 KEDALLYQSK LNSTRGDADMYDLPKKEDALLYQSKGYNDD YDLPKKEDALLYQSKGYNDDYYEESYFTTR K K E S K G 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1193.6292 P50402 P50402 79 88 EMD Emerin yes yes 2;3 2.3865E-22 251.64 By MS/MS 8.29 1.03 2 2 2 1 7 15808000 15808000 0 7431 945 7703 18521;18522;18523;18524;18525;18526;18527 13108;13109;13110;13111 13109 4 1135000 0 KEDLISAFGTDDQTEICK THSVFVNVSKGQVAKKEDLISAFGTDDQTE LISAFGTDDQTEICKQILTKGEVQVSDKER K K E C K Q 1 0 0 3 1 1 2 1 0 2 1 2 0 1 0 1 2 0 0 0 0 0 18 1 2068.9623 Q9Y3A5 Q9Y3A5 68 85 SBDS Ribosome maturation protein SBDS yes yes 2;3 9.7879E-14 190.41 By MS/MS 8 0 2 2 2618100 2618100 0 7432 2922 7704 18528;18529 13112;13113 13113 2 172720 0 KEDLYLKPIQR GLKVRIMGPNYTPGKKEDLYLKPIQRTILM TPGKKEDLYLKPIQRTILMMGRYVEPIEDV K K E Q R T 0 1 0 1 0 1 1 0 0 1 2 2 0 0 1 0 0 0 1 0 0 0 11 2 1401.798 P13639 P13639 439 449 EEF2 Elongation factor 2 yes yes 2;3 0.00089054 180.09 By MS/MS 5 1.22 1 2 2 2 1 8 28974000 28974000 0 7433 576 7705 18530;18531;18532;18533;18534;18535;18536;18537 13114;13115;13116;13117 13115 4 666070 0 KEDVRATEK VGSMPLKNSFRGTIRKEDVRATEKDKVEIY FRGTIRKEDVRATEKDKVEIYKSFRPGDIV R K E E K D 1 1 0 1 0 0 2 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 9 2 1074.5669 Q9Y3B2 Q9Y3B2 105 113 EXOSC1 Exosome complex component CSL4 yes yes 2 0.028224 119.21 By MS/MS 6.5 0.5 1 1 2 9423100 9423100 0 7434 2924 7706 18538;18539 13118 13118 1 77394 0 KEEENASVIDSAELQAYPALVVEK DAYMTLADFCDQQLRKEEENASVIDSAELQ DSAELQAYPALVVEKMLKALKLNSNEARLK R K E E K M 4 0 1 1 0 1 5 0 0 1 2 2 0 0 1 2 0 0 1 3 0 0 24 1 2631.3279 P78527 P78527 3426 3449 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.033332 45.072 By MS/MS 2 0 1 1 337790 337790 0 7435 1197 7707 18540 13119;13120 13119 2 16790 0 KEEEVQQQK EKERKKREERERKRRKEEEVQQQKLAEERR RERKRRKEEEVQQQKLAEERRRQNLQEEKE R K E Q K L 0 0 0 0 0 3 3 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 9 1 1144.5724 Q96CS3 Q96CS3 321 329 FAF2 FAS-associated factor 2 yes yes 2 5.8465E-07 195.32 By MS/MS By matching 6 0 2 1 1 7165000 7153400 11629 7436 2140 7708 18541;18542 13121 13121 1 55782 35666 KEEILLIK AQLTQRSVHICHVARKEEILLIKAAKARGL HICHVARKEEILLIKAAKARGLPVTCEVAP R K E I K A 0 0 0 0 0 0 2 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 8 1 984.62193 P27708 P27708 1618 1625 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0042173 171.38 By MS/MS 2.5 1.12 1 1 1 1 4 2529800 2529800 0 7437 709 7709 18543;18544;18545;18546 13122;13123 13122 2 107790 0 KEELAEALKK ISILTTGMSATSRKRKEELAEALKKLILSK TSRKRKEELAEALKKLILSKGKTPALKYQQ R K E K K L 2 0 0 0 0 0 3 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 10 2 1157.6656 P33991 P33991 798 807 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.021604 84.31 By MS/MS 4 0 1 1 487400 487400 0 7438 773 7710 18547 13124 13124 1 13306 0 KEELTLEGIR VTKKFMRDPIRILVKKEELTLEGIRQFYIN RILVKKEELTLEGIRQFYINVEREEWKLDT K K E I R Q 0 1 0 0 0 0 3 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 10 1 1186.6558 P60842 P60842 238 247 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 3.8128E-15 256.47 By MS/MS By matching 5.14 2.82 3 3 2 1 1 4 3 2 2 1 21 1 1605300000 1605300000 46591 7439 1074 7711 18548;18549;18550;18551;18552;18553;18554;18555;18556;18557;18558;18559;18560;18561;18562;18563;18564;18565;18566;18567;18568;18569 13125;13126;13127;13128;13129;13130;13131;13132;13133;13134;13135;13136;13137;13138;13139;13140;13141;13142;13143 13135 19 29751000 142890 KEELVAEQALK GLLWTCIMNAVEWNKKEELVAEQALKHLKQ EWNKKEELVAEQALKHLKQYAPLLAVFSSQ K K E L K H 2 0 0 0 0 1 3 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 11 1 1256.6976 Q9Y6E2 Q9Y6E2 310 320 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.00018237 169.82 By MS/MS 7 0 1 1 1877900 1877900 0 7440 3004 7712 18570 13144 13144 1 33558 0 KEELVPSEEDFQGITPGAQGPSSR MAPVPGTTTTTTSVKKEELVPSEEDFQGIT DFQGITPGAQGPSSRGREPEARPKRELRER K K E S R G 1 1 0 1 0 2 4 3 0 1 1 1 0 1 3 3 1 0 0 1 0 0 24 1 2557.2296 O75150 O75150 579 602 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 3 0.026591 49.25 By MS/MS 3 0 1 1 868630 868630 0 7441 283 7713 18571 13145 13145 1 22676 0 KEENLADWYSQVITK GQGPKKQTRLGLEAKKEENLADWYSQVITK KEENLADWYSQVITKSEMIEYHDISGCYIL K K E T K S 1 0 1 1 0 1 2 0 0 1 1 2 0 0 0 1 1 1 1 1 0 0 15 1 1822.9101 P07814 P07814 1020 1034 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.0021038 148.18 By MS/MS 3.5 0.5 1 1 2 1614100 1614100 0 7442 493 7714 18572;18573 13146 13146 1 42392 0 KEESEESDDDMGFGLFD AGSAPAAAEEKKDEKKEESEESDDDMGFGL ESEESDDDMGFGLFD_______________ K K E F D - 0 0 0 4 0 0 4 2 0 0 1 1 1 2 0 2 0 0 0 0 0 0 17 1 1948.752 P05387;P05386 P05387 99 115 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 yes no 2 1.674E-13 189.3 By MS/MS 10 0 1 1 505630 505630 0 7443 472 7715 18574 13147 13147 260 1 537430 0 KEFSPFGTITSAK YVKNLDDGIDDERLRKEFSPFGTITSAKVM LRKEFSPFGTITSAKVMMEGGRSKGFGFVC R K E A K V 1 0 0 0 0 0 1 1 0 1 0 2 0 2 1 2 2 0 0 0 0 0 13 1 1411.7347 P11940 P11940 312 324 PABPC1 Polyadenylate-binding protein 1 yes yes 2;3 5.5989E-11 197.36 By MS/MS 5.33 0.471 2 1 3 5484600 5484600 0 7444 560 7716 18575;18576;18577 13148;13149 13148 2 210710 0 KEGTGSTATSSSSTAGAAGK ______________________________ STATSSSSTAGAAGKGKGKGGSGDSAVKQV R K E G K G 4 0 0 0 0 0 1 4 0 0 0 2 0 0 0 5 4 0 0 0 0 0 20 1 1754.8282 O15372 O15372 5 24 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2;3 4.4931E-105 331.4 By MS/MS By matching 7.71 1.03 4 2 1 5 2 6332400 6274200 58156 7445 173 7717 18578;18579;18580;18581;18582;18583;18584 13150;13151;13152 13151 3 214880 238740 KEMQPTHPIR DQSQQAYQEAFEISKKEMQPTHPIRLGLAL FEISKKEMQPTHPIRLGLALNFSVFYYEIL K K E I R L 0 1 0 0 0 1 1 0 1 1 0 1 1 0 2 0 1 0 0 0 0 0 10 1 1235.6445 P27348;P31946;P63104 P63104 158 167 YWHAQ;YWHAB;YWHAZ 14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta no no 3 0.0041904 94.309 By MS/MS 8 0 1 1 0 0 0 7446 1169;703;760 7718 18585 13153 13153 475 1 0 0 KENVATTDTLESTTVGTSV IKEVLLFPAMKPEDKKENVATTDTLESTTV ATTDTLESTTVGTSV_______________ K K E S V - 1 0 1 1 0 0 2 1 0 0 1 1 0 0 0 2 6 0 0 3 0 0 19 1 1951.9586 Q15046 Q15046 579 597 KARS Lysine--tRNA ligase yes yes 2 4.1779E-44 266.77 By MS/MS 5 0 1 1 3008400 3008400 0 7447 1471 7719 18586 13154 13154 1 123660 0 KEPEPNFQLLDNPAR MEVDEAEKKEEKEKKKEPEPNFQLLDNPAR KEPEPNFQLLDNPARVMPAQLKVLTMPETC K K E A R V 1 1 2 1 0 1 2 0 0 0 2 1 0 1 3 0 0 0 0 0 0 0 15 1 1766.8951 Q99460 Q99460 869 883 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.050765 51.606 By MS/MS 4 0 1 1 543140 543140 0 7448 2268 7720 18587 13155 13155 1 14827 0 KESYSVYVYK TKAQKKDGKKRKRSRKESYSVYVYKVLKQV RKRSRKESYSVYVYKVLKQVHPDTGISSKA R K E Y K V 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 3 2 0 0 10 1 1264.634 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 Q99880 35 44 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 2 0.0031479 131.52 By MS/MS 10 0 1 1 344640 344640 0 7449 267 7721 18588 13156 13156 1 366320 0 KETEGDVTSVK SGISSSSVLHGMVFKKETEGDVTSVKDAKI MVFKKETEGDVTSVKDAKIAVYSCPFDGMI K K E V K D 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 2 0 0 2 0 0 11 1 1191.5983 P50990 P50990 225 235 CCT8 T-complex protein 1 subunit theta yes yes 2 5.0464E-07 193.3 By MS/MS 6 0 1 1 13532000 13532000 0 7450 955 7722 18589 13157 13157 1 105520 0 KETQFHGSEGR DDFGESKFITVGWGRKETQFHGSEGRQAAF GWGRKETQFHGSEGRQAAFQMQMHESALPW R K E G R Q 0 1 0 0 0 1 2 2 1 0 0 1 0 1 0 1 1 0 0 0 0 0 11 1 1274.6004 O95163 O95163 166 176 IKBKAP Elongator complex protein 1 yes yes 3 0.043666 71.153 By MS/MS 2 0.816 1 1 1 3 477790 477790 0 7451 368 7723 18590;18591;18592 13158 13158 1 17472 0 KETSNLYK KVDPRKDAHSNLLAKKETSNLYKLQFHNVK HSNLLAKKETSNLYKLQFHNVKPECLEAYN K K E Y K L 0 0 1 0 0 0 1 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 8 1 981.51311 Q9BPW8;O75323 O75323 68 75 NIPSNAP1;GBAS Protein NipSnap homolog 1;Protein NipSnap homolog 2 no no 3 0.01512 101.72 By MS/MS 8 0 1 1 2399100 2399100 0 7452 296;2301 7724 18593 13159 13159 1 158270 0 KEYEQELSDDLHVER RRARLRKREAQLQSRKEYEQELSDDLHVER KEYEQELSDDLHVERYRQFWTRTKK_____ R K E E R Y 0 1 0 2 0 1 4 0 1 0 2 1 0 0 0 1 0 0 1 1 0 0 15 1 1888.8803 Q7Z7F7 Q7Z7F7 104 118 MRPL55 39S ribosomal protein L55, mitochondrial yes yes 3 2.6961E-07 151.11 By MS/MS 10 0 1 1 1002700 1002700 0 7453 1807 7725 18594 13160 13160 1 1065700 0 KFAEAFEAIPR SYGETCPGLEQYAIKKFAEAFEAIPRALAE YAIKKFAEAFEAIPRALAENSGVKANEVIS K K F P R A 3 1 0 0 0 0 2 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 11 1 1277.6768 P50990 P50990 440 450 CCT8 T-complex protein 1 subunit theta yes yes 3 0.0031796 107.03 By MS/MS 6 0 1 1 9291700 9291700 0 7454 955 7726 18595 13161 13161 1 72457 0 KFAEALGSTEAK RITKLRKMVDQLFCKKFAEALGSTEAKAVP FCKKFAEALGSTEAKAVPYQKFEAHPNDLY K K F A K A 3 0 0 0 0 0 2 1 0 0 1 2 0 1 0 1 1 0 0 0 0 0 12 1 1250.6507 P78347 P78347 477 488 GTF2I General transcription factor II-I yes yes 2 0.032988 118.61 By MS/MS 3 0 1 1 394150 394150 0 7455 1194 7727 18596 13162 13162 1 10289 0 KFAETQPK GEVKLCEKMAQFDAKKFAETQPKKDTPRKE MAQFDAKKFAETQPKKDTPRKEKGSREEKQ K K F P K K 1 0 0 0 0 1 1 0 0 0 0 2 0 1 1 0 1 0 0 0 0 0 8 1 947.50763 P26641 P26641 220 227 EEF1G Elongation factor 1-gamma yes yes 2 0.014011 145.34 By MS/MS By matching 6.33 0.471 2 1 2 1 28491000 28471000 20092 7456 700 7728 18597;18598;18599 13163 13163 1 323500 61621 KFDQLLAEEK DHQRQSACNLEKKQKKFDQLLAEEKTISAK EKKQKKFDQLLAEEKTISAKYAEERDRAEA K K F E K T 1 0 0 1 0 1 2 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 10 1 1219.6449 Q7Z406;P35580;P35579 P35579 1445 1454 MYH14;MYH10;MYH9 Myosin-14;Myosin-10;Myosin-9 no no 2 0.0054146 119.22 By MS/MS By matching 2.33 0.471 2 1 2 1 817080 777480 39600 7457 793;794;1788 7729 18600;18601;18602 13164 13164 1 26828 33339 KFEEIPIAHIK PPIPGEESSLRWAGKKFEEIPIAHIKASHN WAGKKFEEIPIAHIKASHNNTQIQVVSASN K K F I K A 1 0 0 0 0 0 2 0 1 3 0 2 0 1 1 0 0 0 0 0 0 0 11 1 1323.7551 P82912 P82912 79 89 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 3 0.049156 68.786 By MS/MS 10 0 1 1 880340 880340 0 7458 1206 7730 18603 13165 13165 1 935700 0 KFHEAQLSEK PENGNPQQMQQELQRKFHEAQLSEKISLQA QELQRKFHEAQLSEKISLQAIQQLVRKSYQ R K F E K I 1 0 0 0 0 1 2 0 1 0 1 2 0 1 0 1 0 0 0 0 0 0 10 1 1215.6248 O75694 O75694 766 775 NUP155 Nuclear pore complex protein Nup155 yes yes 3 0.00066319 111.5 By MS/MS 3 0 1 1 523120 523120 0 7459 324 7731 18604 13166 13166 1 13656 0 KFLDGIYVSEK ALIQQATTVKNKDIRKFLDGIYVSEKGTVQ KDIRKFLDGIYVSEKGTVQQADE_______ R K F E K G 0 0 0 1 0 0 1 1 0 1 1 2 0 1 0 1 0 0 1 1 0 0 11 1 1297.6918 P32969 P32969 174 184 RPL9 60S ribosomal protein L9 yes yes 2 0.0058925 126.66 By MS/MS 9 0 1 1 512130 512130 0 7460 765 7732 18605 13167 13167 1 293920 0 KFNDPNDPCK IYGSLPPGTKLAQAKKFNDPNDPCKILVAT LAQAKKFNDPNDPCKILVATDAIGMGLNLS K K F C K I 0 0 2 2 1 0 0 0 0 0 0 2 0 1 2 0 0 0 0 0 0 0 10 1 1233.5448 Q8IYB8 Q8IYB8 410 419 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.0041329 120.31 By MS/MS 5 0 1 1 388340 388340 0 7461 1879 7733 18606 13168 13168 1 15962 0 KFPHLAEAQK RKENLERKKAKILLKKFPHLAEAQKSSLV_ KILLKKFPHLAEAQKSSLV___________ K K F Q K S 2 0 0 0 0 1 1 0 1 0 1 2 0 1 1 0 0 0 0 0 0 0 10 1 1167.64 Q9HD33 Q9HD33 237 246 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 3 0.012924 91.658 By MS/MS 9 0 1 1 497450 497450 0 7462 2567 7734 18607 13169 13169 1 285490 0 KFSFPTVALHSMMK TNTCKTCQILCMMLRKFSFPTVALHSMMKQ RKFSFPTVALHSMMKQKERFAALAKFKSSI R K F M K Q 1 0 0 0 0 0 0 0 1 0 1 2 2 2 1 2 1 0 0 1 0 0 14 1 1622.8313 Q9Y6V7 Q9Y6V7 270 283 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 2 0.038795 72.321 By MS/MS 6 0 1 1 166970 166970 0 7463 3012 7735 18608 13170 13170 1734 0 1302 0 KFTYLGSQDR HRASLEDAPVDDLTRKFTYLGSQDRARPPS DDLTRKFTYLGSQDRARPPSGSSKATDLGG R K F D R A 0 1 0 1 0 1 0 1 0 0 1 1 0 1 0 1 1 0 1 0 0 0 10 1 1213.6091 Q7Z2W4 Q7Z2W4 296 305 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0040718 120.45 By MS/MS 4.5 0.5 1 1 2 1540000 1540000 0 7464 1777 7736 18609;18610 13171 13171 1 47001 0 KFYPLEIDYGQDEEAVK TGNAWHSKNFTKYPKKFYPLEIDYGQDEEA YPLEIDYGQDEEAVKKLTVNPGTKSKLPKP K K F V K K 1 0 0 2 0 1 3 1 0 1 1 2 0 1 1 0 0 0 2 1 0 0 17 1 2042.9837 P09874 P09874 637 653 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.00068244 132.44 By MS/MS 4 0.707 1 2 1 4 2615300 2615300 0 7465 521 7737 18611;18612;18613;18614 13172;13173 13173 2 73131 0 KFYPLEIDYGQDEEAVKK TGNAWHSKNFTKYPKKFYPLEIDYGQDEEA PLEIDYGQDEEAVKKLTVNPGTKSKLPKPV K K F K K L 1 0 0 2 0 1 3 1 0 1 1 3 0 1 1 0 0 0 2 1 0 0 18 2 2171.0787 P09874 P09874 637 654 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.00010818 129.42 By MS/MS 4.5 0.5 1 1 2 3179900 3179900 0 7466 521 7738 18615;18616 13174 13174 1 89708 0 KGAYDIFLNAK DFQKDILIACRLNQKKGAYDIFLNAKEQNI LNQKKGAYDIFLNAKEQNIVFNAETYSNLI K K G A K E 2 0 1 1 0 0 0 1 0 1 1 2 0 1 0 0 0 0 1 0 0 0 11 1 1238.6659 P42704 P42704 1049 1059 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 6.0044E-10 197.21 By MS/MS 3.5 0.5 1 1 2 19033000 19033000 0 7467 854 7739 18617;18618 13175 13175 1 497680 0 KGDECELLGHSK RGTVVTGTLERGILKKGDECELLGHSKNIR ILKKGDECELLGHSKNIRTVVTGIEMFHKS K K G S K N 0 0 0 1 1 0 2 2 1 0 2 2 0 0 0 1 0 0 0 0 0 0 12 1 1371.6453 P49411 P49411 286 297 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 3.3577E-23 251.81 By MS/MS 5.77 2.45 1 1 1 1 1 1 3 3 1 13 124190000 124190000 0 7468 918 7740 18619;18620;18621;18622;18623;18624;18625;18626;18627;18628;18629;18630;18631 13176;13177;13178;13179;13180 13178 5 2672100 0 KGDECELLGHSKNIR RGTVVTGTLERGILKKGDECELLGHSKNIR KGDECELLGHSKNIRTVVTGIEMFHKSLER K K G I R T 0 1 1 1 1 0 2 2 1 1 2 2 0 0 0 1 0 0 0 0 0 0 15 2 1754.8734 P49411 P49411 286 300 TUFM Elongation factor Tu, mitochondrial yes yes 4 0.019226 67.115 By MS/MS 7.5 0.5 1 1 2 667150 667150 0 7469 918 7741 18632;18633 13181 13181 1 16895 0 KGDEVDGVDEVAK ALKKQLPGVKSEGKRKGDEVDGVDEVAKKK KRKGDEVDGVDEVAKKKSKKEKDKDSKLEK R K G A K K 1 0 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 13 1 1359.6518 P09874 P09874 209 221 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 3.0513E-17 225.55 By MS/MS 4 0 1 1 1498900 1498900 0 7470 521 7742 18634 13182 13182 1 40918 0 KGDEYIINGQK GAGSDVAGIKTKAEKKGDEYIINGQKMWIT KAEKKGDEYIINGQKMWITNGGKANWYFLL K K G Q K M 0 0 1 1 0 1 1 2 0 2 0 2 0 0 0 0 0 0 1 0 0 0 11 1 1263.6459 P11310 P11310 179 189 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2;3 3.1696E-07 164.66 By MS/MS 7 0 2 2 3854000 3854000 0 7471 552 7743 18635;18636 13183;13184 13184 1 68871 0 KGDIFLVR VYLKPYFLEAYRPIRKGDIFLVRGGMRAVE EAYRPIRKGDIFLVRGGMRAVEFKVVETDP R K G V R G 0 1 0 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 1 946.56 P55072 P55072 148 155 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00012347 201.39 By MS/MS 4.5 0.5 1 1 2 11938000 11938000 0 7472 1026 7744 18637;18638 13185 13185 1 345170 0 KGDIIQLQR HEELMLGDPCLKDLKKGDIIQLQRRGFFIC CLKDLKKGDIIQLQRRGFFICDQPYEPVSP K K G Q R R 0 1 0 1 0 2 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1069.6244 P07814 P07814 666 674 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0019539 153.24 By MS/MS By matching 3.33 0.471 2 1 2 1 11367000 11319000 47746 7473 493 7745 18639;18640;18641 13186;13187 13186 2 296750 68429 KGDLLLNR NRPDSKNWQYQETIKKGDLLLNRVQKLSRV QYQETIKKGDLLLNRVQKLSRVINM_____ K K G N R V 0 1 1 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 1 927.55016 Q15008 Q15008 372 379 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0065057 161.9 By MS/MS 7 0.816 1 1 1 3 11893000 11893000 0 7474 1460 7746 18642;18643;18644 13188 13188 1 313610 0 KGDTIYNTR FGQLTYVRSYQGELKKGDTIYNTRTRKKVR YQGELKKGDTIYNTRTRKKVRLQRLARMHA K K G T R T 0 1 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 0 1 0 0 0 9 1 1066.5407 Q96RP9 Q96RP9 380 388 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0034351 144.65 By MS/MS 6 0.816 1 1 1 3 7517400 7517400 0 7475 2247 7747 18645;18646;18647 13189;13190 13190 2 226650 0 KGEDVLGSVR PALSAALYYLVVQGKKGEDVLGSVRRALTH VVQGKKGEDVLGSVRRALTHIDHSLSRQNC K K G V R R 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 0 2 0 0 10 1 1058.572 P56192 P56192 109 118 MARS Methionine--tRNA ligase, cytoplasmic yes yes 3 0.0021645 104.07 By MS/MS 4 0 1 1 1260400 1260400 0 7476 1042 7748 18648 13191 13191 1 34408 0 KGEFETGFEK GASQADLAVLVISARKGEFETGFEKGGQTR VISARKGEFETGFEKGGQTREHAMLAKTAG R K G E K G 0 0 0 0 0 0 3 2 0 0 0 2 0 2 0 0 1 0 0 0 0 0 10 1 1170.5557 P15170;Q8IYD1 P15170 187 196 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 0.012967 112.85 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 3998800 3998800 0 7477 597 7749 18649;18650;18651;18652;18653;18654 13192 13192 1 102410 0 KGEGLPNFDNNNIK ISRDKITRPGAKLWKKGEGLPNFDNNNIKG KKGEGLPNFDNNNIKGSLIITFDVDFPKEQ K K G I K G 0 0 4 1 0 0 1 2 0 1 1 2 0 1 1 0 0 0 0 0 0 0 14 1 1558.774 Q9UBS4 Q9UBS4 302 315 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2;3 1.4069E-11 204.48 By MS/MS 7 0 2 2 8012900 8012900 0 7478 2756 7750 18655;18656 13193;13194 13194 2 143190 0 KGEICIQDGWEGVK ESFTILTRDIYELIKKGEICIQDGWEGVKS KKGEICIQDGWEGVKSGFVPNTVHSSEEAV K K G V K S 0 0 0 1 1 1 2 3 0 2 0 2 0 0 0 0 0 1 0 1 0 0 14 1 1617.7821 Q14964 Q14964 181 194 RAB39A Ras-related protein Rab-39A yes yes 2 5.5977E-05 164.68 By MS/MS 9 0 1 1 275590 275590 0 7479 1451 7751 18657 13195 13195 1 158160 0 KGEIFELK ______________________________ KYFTTTKKGEIFELKAELNSDKKEKKKEAV K K G L K A 0 0 0 0 0 0 2 1 0 1 1 2 0 1 0 0 0 0 0 0 0 0 8 1 962.54368 P63010;Q10567 Q10567 12 19 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 0.044332 117.81 By MS/MS 3.5 0.5 1 1 2 1053600 1053600 0 7480 1300;1167 7752 18658;18659 13196 13196 1 28600 0 KGEITGEVR TSLRPFDLVIPFTIKKGEITGEVRMPSGKV IPFTIKKGEITGEVRMPSGKVAQPTITDNK K K G V R M 0 1 0 0 0 0 2 2 0 1 0 1 0 0 0 0 1 0 0 1 0 0 9 1 987.53491 P21333 P21333 1801 1809 FLNA Filamin-A yes yes 2 0.0030829 146.69 By MS/MS 2 0 1 1 1111100 1111100 0 7481 648 7753 18660 13197 13197 1 55227 0 KGEKDIPGLTDTTVPR IVDANLSVLNLVIVKKGEKDIPGLTDTTVP GEKDIPGLTDTTVPRRLGPKRASRIRKLFN K K G P R R 0 1 0 2 0 0 1 2 0 1 1 2 0 0 2 0 3 0 0 1 0 0 16 2 1725.9261 P62753 P62753 116 131 RPS6 40S ribosomal protein S6 yes yes 3 0.00029621 120.59 By MS/MS 8 0 1 1 7549000 7549000 0 7482 1143 7754 18661 13198 13198 1 498000 0 KGESQTDIEITR KNPRIVLLDSSLEYKKGESQTDIEITREED EYKKGESQTDIEITREEDFTRILQMEEEYI K K G T R E 0 1 0 1 0 1 2 1 0 2 0 1 0 0 0 1 2 0 0 0 0 0 12 1 1375.6943 P49368 P49368 249 260 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 5.6141E-05 173.76 By MS/MS By matching 6.33 0.943 1 3 1 1 5 1 44474000 44462000 11129 7483 916 7755 18662;18663;18664;18665;18666;18667 13199;13200;13201 13200 3 407370 34133 KGESQTDIEITREEDFTR KNPRIVLLDSSLEYKKGESQTDIEITREED SQTDIEITREEDFTRILQMEEEYIQQLCED K K G T R I 0 2 0 2 0 1 4 1 0 2 0 1 0 1 0 1 3 0 0 0 0 0 18 2 2153.0237 P49368 P49368 249 266 CCT3 T-complex protein 1 subunit gamma yes yes 3;4 7.6371E-15 193.31 By MS/MS 6 1.41 2 2 2 2 2 10 397270000 397270000 0 7484 916 7756 18668;18669;18670;18671;18672;18673;18674;18675;18676;18677 13202;13203;13204;13205;13206;13207 13204 6 3993100 0 KGFDQEEVFEKPTR FRSVFYRSYKEQESKKGFDQEEVFEKPTRE KKGFDQEEVFEKPTRETCQGMRHAIYDKLD K K G T R E 0 1 0 1 0 1 3 1 0 0 0 2 0 2 1 0 1 0 0 1 0 0 14 2 1708.842 P30876 P30876 821 834 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 1.0291E-05 164.2 By MS/MS 4 0.816 1 1 1 3 4234800 4234800 0 7485 748 7757 18678;18679;18680 13208 13208 1 113040 0 KGHAVGDIPGVR FIEENDEVLVAGFGRKGHAVGDIPGVRFKV FGRKGHAVGDIPGVRFKVVKVANVSLLALY R K G V R F 1 1 0 1 0 0 0 3 1 1 0 1 0 0 1 0 0 0 0 2 0 0 12 1 1204.6677 P62266 P62266 108 119 RPS23 40S ribosomal protein S23 yes yes 3 0.013617 92.247 By MS/MS By matching 10 0 2 1 1 694340 671080 23261 7486 1123 7758 18681;18682 13209 13209 1 713290 596630 KGKLPIVNEDDELVAIIAR GITLKEANEILQRSKKGKLPIVNEDDELVA PIVNEDDELVAIIARTDLKKNRDYPLASKD K K G A R T 2 1 1 2 0 0 2 1 0 3 2 2 0 0 1 0 0 0 0 2 0 0 19 2 2092.1892 P12268 P12268 206 224 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.014187 68.123 By MS/MS 6 0 1 1 1606300 1606300 0 7487 564 7759 18683 13210 13210 1 12526 0 KGLDPYNVLAPK EQATGLEREIMLAAKKGLDPYNVLAPKGAS AAKKGLDPYNVLAPKGASGTREDPNLVPSI K K G P K G 1 0 1 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 1 1 0 0 12 1 1313.7343 P10606 P10606 57 68 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 2;3 0.0063419 122.69 By MS/MS 10 0 2 2 2315700 2315700 0 7488 540 7760 18684;18685 13211;13212 13212 2 2461400 0 KGPAAIQK ANNDLENKIQDWYDKKGPAAIQKNYSPYYN IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ K K G Q K N 2 0 0 0 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 0 0 8 1 811.49159 P35527;CON__P35527 P35527 192 199 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0036026 173.93 By MS/MS By MS/MS 5.75 2.98 1 1 2 2 1 1 1 1 2 3 9 3791600 1335700 2455900 + 7489 791 7761 18686;18687;18688;18689;18690;18691;18692;18693;18694;18695;18696;18697 13213;13214;13215;13216;13217;13218;13219;13220 13214 8 493840 5190000 KGPEADSEWR KDSRWGDRDSEGTWRKGPEADSEWRRGPPE EGTWRKGPEADSEWRRGPPEKEWRRGEGRD R K G W R R 1 1 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 10 1 1173.5415 Q14152 Q14152 901 910 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00052821 161.51 By MS/MS 3.5 0.5 1 1 2 6425100 6425100 0 7490 1409 7762 18698;18699 13221 13221 1 168320 0 KGPEADSEWRR KDSRWGDRDSEGTWRKGPEADSEWRRGPPE GTWRKGPEADSEWRRGPPEKEWRRGEGRDE R K G R R G 1 2 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 11 2 1329.6426 Q14152 Q14152 901 911 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.035815 77.288 By MS/MS 3.5 0.5 1 1 2 6129200 6129200 0 7491 1409 7763 18700;18701 13222 13222 1 160420 0 KGQENLKK RAELQAQIAFLQGERKGQENLKKDLVRRIK AFLQGERKGQENLKKDLVRRIKMLEYALKQ R K G K K D 0 0 1 0 0 1 1 1 0 0 1 3 0 0 0 0 0 0 0 0 0 0 8 2 943.54508 O43815;Q13033 O43815 89 96 STRN;STRN3 Striatin;Striatin-3 no no 3 0.033723 94.114 By MS/MS 5 0.816 1 1 1 3 116990 116990 0 7492 225;1326 7764 18702;18703;18704 13223 13223 1 2851 0 KGSEASAASR EKEPGEQASVPLSPKKGSEASAASRQSDTS PLSPKKGSEASAASRQSDTSGPVTTSKSSS K K G S R Q 3 1 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 10 1 962.47812 P42858 P42858 1202 1211 HTT Huntingtin yes yes 2 0.0031925 130.98 By MS/MS 1.5 0.5 1 1 2 105810 105810 0 7493 858 7765 18705;18706 13224;13225 13224 2 5212.5 0 KGSEQESVKEFLAK ______________________________ KKGSEQESVKEFLAKAKEDFLKKWESPAQN K K G A K A 1 0 0 0 0 1 3 1 0 0 1 3 0 1 0 2 0 0 0 1 0 0 14 2 1578.8253 P17612 P17612 9 22 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes yes 3 0.0045984 87.083 By MS/MS 7 0 1 1 4522300 4522300 0 7494 614 7766 18707 13226 13226 1 80814 0 KGSLESPATDVFGSTEEGEKR MRWSTLVEDYGMELRKGSLESPATDVFGST PATDVFGSTEEGEKRWKDLKNRVVEHNIRI R K G K R W 1 1 0 1 0 0 4 3 0 0 1 2 0 1 1 3 2 0 0 1 0 0 21 2 2223.0655 O00232 O00232 330 350 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 0.0003207 103.92 By MS/MS 6 0 1 1 11498000 11498000 0 7495 81 7767 18708 13227 13227 1 89666 0 KGTDIMYTGTLDCWR PFDTVRRRMMMQSGRKGTDIMYTGTLDCWR KGTDIMYTGTLDCWRKIARDEGGKAFFKGA R K G W R K 0 1 0 2 1 0 0 2 0 1 1 1 1 0 0 0 3 1 1 0 0 0 15 1 1815.8284 P05141 P05141 245 259 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 1.325E-06 162.48 By MS/MS 7 2.71 1 4 1 6 18650000 18650000 0 7496 469 7768;7769 18709;18710;18711;18712;18713;18714 13228;13229;13230;13231;13232 13228 256 5 1248600 0 KGTEVQVDDIKR AIQLITAASLVCRKRKGTEVQVDDIKRVYS RKRKGTEVQVDDIKRVYSLFLDESRSTQYM R K G K R V 0 1 0 2 0 1 1 1 0 1 0 2 0 0 0 0 1 0 0 2 0 0 12 2 1386.7467 Q9Y230 Q9Y230 417 428 RUVBL2 RuvB-like 2 yes yes 2;3 1.8729E-05 190.53 By MS/MS By matching 6 0 3 2 1 26355000 26320000 34939 7497 2864 7770 18715;18716;18717 13233;13234 13233 2 205250 107150 KGTGIAAQTAGIAAAAR LAFASCGTEGFRNAKKGTGIAAQTAGIAAA TGIAAQTAGIAAAARAKQKGVIHIRVVVKG K K G A R A 7 1 0 0 0 1 0 3 0 2 0 1 0 0 0 0 2 0 0 0 0 0 17 1 1526.8529 P82912 P82912 122 138 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 3 0.014023 63.462 By MS/MS 10 0 1 1 588410 588410 0 7498 1206 7771 18718 13235 13235 1 625420 0 KGTGLLSSDYR SSLGSLQTPEAVTTRKGTGLLSSDYRIING VTTRKGTGLLSSDYRIINGKSGTQDIQPGP R K G Y R I 0 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 1 0 1 0 0 0 11 1 1195.6197 Q7Z2W4 Q7Z2W4 401 411 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.034497 99.343 By MS/MS 4 0.816 1 1 1 3 2305900 2305900 0 7499 1777 7772 18719;18720;18721 13236 13236 1 65968 0 KGTVEGFEPADNK ITLKKYDGRTKPIPKKGTVEGFEPADNKCL PKKGTVEGFEPADNKCLLRATDGKKKISTV K K G N K C 1 0 1 1 0 0 2 2 0 0 0 2 0 1 1 0 1 0 0 1 0 0 13 1 1390.6729 P37108 P37108 43 55 SRP14 Signal recognition particle 14 kDa protein yes yes 2 2.8819E-07 189.24 By MS/MS 10 0 1 1 387630 387630 0 7500 813 7773 18722 13237 13237 1 412010 0 KGVAEQK RFMRDQEKLSLMYARKGVAEQKREKEIKSE KLSLMYARKGVAEQKREKEIKSELKMKQDA R K G Q K R 1 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 7 1 758.42865 P78527 P78527 2746 2752 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.036621 155.51 By MS/MS 1.5 0.5 1 1 2 171750 171750 0 7501 1197 7774 18723;18724 13238 13238 1 8477.9 0 KGVAINMVTEEDK ENYIHRIGRGGRFGRKGVAINMVTEEDKRT GRKGVAINMVTEEDKRTLRDIETFYNTSIE R K G D K R 1 0 1 1 0 0 2 1 0 1 0 2 1 0 0 0 1 0 0 2 0 0 13 1 1432.7232 P60842 P60842 369 381 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 0.0011805 142.89 By MS/MS 2.5 2.06 2 1 1 4 5657800 5657800 0 7502 1074 7775 18725;18726;18727;18728 13239;13240;13241 13241 3 96800 0 KGVAINMVTEEDKR ENYIHRIGRGGRFGRKGVAINMVTEEDKRT RKGVAINMVTEEDKRTLRDIETFYNTSIEE R K G K R T 1 1 1 1 0 0 2 1 0 1 0 2 1 0 0 0 1 0 0 2 0 0 14 2 1588.8243 P60842 P60842 369 382 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 1.0149E-24 239.48 By MS/MS By matching 4.78 2.79 8 6 6 4 4 8 4 4 3 3 48 2 1408200000 1408200000 49776 7503 1074 7776;7777 18729;18730;18731;18732;18733;18734;18735;18736;18737;18738;18739;18740;18741;18742;18743;18744;18745;18746;18747;18748;18749;18750;18751;18752;18753;18754;18755;18756;18757;18758;18759;18760;18761;18762;18763;18764;18765;18766;18767;18768;18769;18770;18771;18772;18773;18774;18775;18776;18777;18778 13242;13243;13244;13245;13246;13247;13248;13249;13250;13251;13252;13253;13254;13255;13256;13257;13258;13259;13260;13261;13262;13263;13264;13265;13266;13267;13268;13269;13270;13271;13272;13273;13274;13275;13276;13277;13278;13279;13280;13281 13270 844 38 34593000 59824 KGVITVKDGK EIGNIISDAMKKVGRKGVITVKDGKTLNDE KKVGRKGVITVKDGKTLNDELEIIEGMKFD R K G G K T 0 0 0 1 0 0 0 2 0 1 0 3 0 0 0 0 1 0 0 2 0 0 10 2 1043.6339 P10809 P10809 196 205 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.00019997 196.52 By MS/MS By matching 6 0 3 2 1 6852100 6826000 26142 7504 544 7778 18779;18780;18781 13282;13283 13282 2 53229 80175 KGVNLPGAAVDLPAVSEKDIQDLK FLVTEVENGGSLGSKKGVNLPGAAVDLPAV VDLPAVSEKDIQDLKFGVEQDVDMVFASFI K K G L K F 3 0 1 3 0 1 1 2 0 1 3 3 0 0 2 1 0 0 0 3 0 0 24 2 2476.3537 P14618 P14618 207 230 PKM Pyruvate kinase PKM yes yes 3 9.1609E-05 91.416 By MS/MS 6 0 1 1 5575400 5575400 0 7505 588 7779 18782 13284 13284 1 43478 0 KHDSGAADLER ETETSGPERPPEKPRKHDSGAADLERVTDY EKPRKHDSGAADLERVTDYAEEKEIQSSNL R K H E R V 2 1 0 2 0 0 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 11 1 1197.5738 Q9NX55 Q9NX55 35 45 HYPK Huntingtin-interacting protein K yes yes 3 0.0018767 123.26 By MS/MS 10 0 1 1 361610 361610 0 7506 2680 7780 18783 13285 13285 1 384360 0 KHEEEEAKAER VIRVLKQKEVEQLIKKHEEEEAKAEREKKE QLIKKHEEEEAKAEREKKEKEQKEKDK___ K K H E R E 2 1 0 0 0 0 5 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 11 2 1354.6477 P25789 P25789 239 249 PSMA4 Proteasome subunit alpha type-4 yes yes 3 0.00919 95.273 By MS/MS By matching 8 0 2 1 1 271500 229490 42019 7507 691 7781 18784;18785 13286 13286 1 15139 358480 KHEETECPLR VTCKCNKKLEKRLLKKHEETECPLRLAVCQ KRLLKKHEETECPLRLAVCQHCDLELSILK K K H L R L 0 1 0 0 1 0 3 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 10 1 1297.6085 O14545 O14545 77 86 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.0055733 99.973 By MS/MS 5 0 1 1 335030 335030 0 7508 113 7782 18786 13287 13287 1 13771 0 KHFGAGGNQR SEDPDQQYLILNTARKHFGAGGNQRIRFTL LNTARKHFGAGGNQRIRFTLPPLVFAAYQL R K H Q R I 1 1 1 0 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 10 1 1070.537 Q96QK1 Q96QK1 515 524 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.0084979 96.665 By MS/MS 5 0 1 1 730810 730810 0 7509 2242 7783 18787 13288 13288 1 30039 0 KHFSQAEGSQLDEVR LIRQNKRLDAVRHARKHFSQAEGSQLDEVR KHFSQAEGSQLDEVRQAMGMLAFPPDTHIS R K H V R Q 1 1 0 1 0 2 2 1 1 0 1 1 0 1 0 2 0 0 0 1 0 0 15 1 1729.8384 Q7L5Y9 Q7L5Y9 223 237 MAEA Macrophage erythroblast attacher yes yes 3 3.0141E-07 160.79 By MS/MS 7 0 1 1 1906200 1906200 0 7510 1769 7784 18788 13289 13289 1 34064 0 KHIEDEKLVR KDVVTLLAEGLRESRKHIEDEKLVRYFLDK LRESRKHIEDEKLVRYFLDKTLTSRLGIRM R K H V R Y 0 1 0 1 0 0 2 0 1 1 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1265.7092 O14874 O14874 178 187 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes yes 3 0.019756 86.189 By MS/MS 7 0 1 1 682800 682800 0 7511 131 7785 18789 13290 13290 1 12202 0 KHLEINPDHPIVETLR QALRDNSTMGYMMAKKHLEINPDHPIVETL HLEINPDHPIVETLRQKAEADKNDKAVKDL K K H L R Q 0 1 1 1 0 0 2 0 2 2 2 1 0 0 2 0 1 0 0 1 0 0 16 1 1910.0374 P08238 P08238 624 639 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3;4 0.0022947 109.48 By MS/MS 5 0.816 2 2 2 6 21600000 21600000 0 7512 501 7786 18790;18791;18792;18793;18794;18795 13291;13292;13293 13293 3 655830 0 KHLEINPDHSIIETLR QALRDNSTMGYMAAKKHLEINPDHSIIETL HLEINPDHSIIETLRQKAEADKNDKSVKDL K K H L R Q 0 1 1 1 0 0 2 0 2 3 2 1 0 0 1 1 1 0 0 0 0 0 16 1 1914.0323 P07900 P07900 632 647 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 4 0.019933 60.158 By MS/MS 4 0 1 1 1487000 1487000 0 7513 494 7787 18796 13294 13294 1 40593 0 KHPDASVNFSEFSK SYAFFVQTCREEHKKKHPDASVNFSEFSKK KKHPDASVNFSEFSKKCSERWKTMSAKEKG K K H S K K 1 0 1 1 0 0 1 0 1 0 0 2 0 2 1 3 0 0 0 1 0 0 14 1 1591.7631 P09429 P09429 30 43 HMGB1 High mobility group protein B1 yes yes 3 0.022397 82.578 By MS/MS 8 0 1 1 885310 885310 0 7514 515 7788 18797 13295 13295 1 58404 0 KIAELMPGASGAEVK IHSRKMNLTRGINLRKIAELMPGASGAEVK KIAELMPGASGAEVKGVCTEAGMYALRERR R K I V K G 3 0 0 0 0 0 2 2 0 1 1 2 1 0 1 1 0 0 0 1 0 0 15 1 1499.8018 P62195 P62195 346 360 PSMC5 26S protease regulatory subunit 8 yes yes 3 0.023932 87.138 By MS/MS 7 0 1 1 956120 956120 0 7515 1117 7789 18798 13296 13296 869 1 17086 0 KIAKDEGAK KGADIMYTGTVDCWRKIAKDEGAKAFFKGA TVDCWRKIAKDEGAKAFFKGAWSNVLRGMG R K I A K A 2 0 0 1 0 0 1 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 9 2 958.54475 P12235 P12235 260 268 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.0059346 148.52 By MS/MS 4.2 2.79 1 1 1 1 1 5 234460 234460 0 7516 562 7790 18799;18800;18801;18802;18803 13297;13298;13299 13297 3 9830.1 0 KIASFPTAK RRNEVRTHVGSYKGKKIASFPTAKYITEPE GSYKGKKIASFPTAKYITEPEMVFEEHEVN K K I A K Y 2 0 0 0 0 0 0 0 0 1 0 2 0 1 1 1 1 0 0 0 0 0 9 1 961.55967 Q12849 Q12849 340 348 GRSF1 G-rich sequence factor 1 yes yes 2 0.040114 104.01 By MS/MS 6 0 1 1 3465600 3465600 0 7517 1310 7791 18804 13300 13300 1 27025 0 KIDGLLIDQIQR TRYFGGMVWYFVNNKKIDGLLIDQIQRDLI NNKKIDGLLIDQIQRDLIDDATNLVQLYHV K K I Q R D 0 1 0 2 0 2 0 1 0 3 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1410.8195 P82650 P82650 280 291 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2;3 2.2038E-10 202.65 By MS/MS 7.25 0.433 3 1 4 15280000 15280000 0 7518 1201 7792 18805;18806;18807;18808 13301;13302;13303 13301 2 278760 0 KIDQEGKIPDETLEK LGPVEKFFTEEVDSRKIDQEGKIPDETLEK KIDQEGKIPDETLEKLKSLGLFGLQVPEEY R K I E K L 0 0 0 2 0 1 3 1 0 2 1 3 0 0 1 0 1 0 0 0 0 0 15 2 1741.9098 Q9H845 Q9H845 86 100 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 3 0.043944 62.813 By MS/MS 6 0 1 1 2945900 2945900 0 7519 2521 7793 18809 13304 13304 1 22972 0 KIEAEIVR AWSNPLHPDIFPGLRKIEAEIVRIACSLFN DIFPGLRKIEAEIVRIACSLFNGGPDSCGC R K I V R I 1 1 0 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 8 1 956.56548 O95470 O95470 183 190 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.042285 118.5 By MS/MS 6.5 0.5 1 1 2 2628100 2628100 0 7520 395 7794 18810;18811 13305 13305 1 21960 0 KIEALLNLPR IESSLQEDEPENDAKKIEALLNLPRNPSVI ENDAKKIEALLNLPRNPSVIDKQDKD____ K K I P R N 1 1 1 0 0 0 1 0 0 1 3 1 0 0 1 0 0 0 0 0 0 0 10 1 1165.7183 Q9NPL8 Q9NPL8 265 274 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 0.0031561 154.01 By MS/MS 8 0 1 1 1392100 1392100 0 7521 2583 7795 18812 13306 13306 1 91838 0 KIEEVVER KEEIFGPVQPLFKFKKIEEVVERANNTRYG QPLFKFKKIEEVVERANNTRYGLAAAVFTR K K I E R A 0 1 0 0 0 0 3 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 8 1 1000.5553 P30837 P30837 429 436 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.040663 145.16 By MS/MS 6 0 1 1 0 0 0 7522 747 7796 18813 13307 13307 1 0 0 KIEFPLPDRR DTLDPALLRPGRLDRKIEFPLPDRRQKRLI GRLDRKIEFPLPDRRQKRLIFSTITSKMNL R K I R R Q 0 2 0 1 0 0 1 0 0 1 1 1 0 1 2 0 0 0 0 0 0 0 10 2 1269.7194 P43686 P43686 330 339 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.015417 102.06 By MS/MS 6 0 1 1 3700900 3700900 0 7523 867 7797 18814 13308 13308 1 28860 0 KIEFSLPDLEGR DTLDPALMRPGRLDRKIEFSLPDLEGRTHI LDRKIEFSLPDLEGRTHIFKIHARSMSVER R K I G R T 0 1 0 1 0 0 2 1 0 1 2 1 0 1 1 1 0 0 0 0 0 0 12 1 1402.7456 P35998 P35998 340 351 PSMC2 26S protease regulatory subunit 7 yes yes 2;3 0.0029027 97.734 By MS/MS 6.5 0.5 2 2 4 3788000 3788000 0 7524 801 7798 18815;18816;18817;18818 13309;13310;13311 13310 1 44294 0 KIEISQHAK KYGTRYGASLRKMVKKIEISQHAKYTCSFC LRKMVKKIEISQHAKYTCSFCGKTKMKRRA K K I A K Y 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 1 0 0 0 0 0 0 9 1 1052.5978 P61513 P61513 28 36 RPL37A 60S ribosomal protein L37a yes yes 2;3 0.0011769 129.85 By MS/MS By matching 10 0 3 2 1 684860 663540 21322 7525 1100 7799 18819;18820;18821 13312;13313 13312 2 705270 546900 KIEKEIQQK ______________________________ KVDFLKKIEKEIQQKWDTERVFEVNASNLE K K I Q K W 0 0 0 0 0 2 2 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 9 2 1142.6659 Q9P2J5 Q9P2J5 15 23 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 6.0144E-11 229.55 By MS/MS 3 0 1 1 662980 662980 0 7526 2738 7800 18822 13314 13314 1 17307 0 KIEPGTAADSQQIHEEK VFFRVMMAELEKTVKKIEPGTAADSQQIHE EPGTAADSQQIHEEKLLYWNMAVRDFSILI K K I E K L 2 0 0 1 0 2 3 1 1 2 0 2 0 0 1 1 1 0 0 0 0 0 17 1 1879.9276 Q9BXW9 Q9BXW9 1248 1264 FANCD2 Fanconi anemia group D2 protein yes yes 3 0.0014521 114.06 By MS/MS 3 0 1 1 885880 885880 0 7527 2405 7801 18823 13315 13315 1 23126 0 KIESFGSK HVVFGHVKEGMDVVKKIESFGSKSGRTSKK EGMDVVKKIESFGSKSGRTSKKIVITDCGQ K K I S K S 0 0 0 0 0 0 1 1 0 1 0 2 0 1 0 2 0 0 0 0 0 0 8 1 894.48108 P30405 P30405 183 190 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 2 0.023862 132.76 By MS/MS 9 0 1 1 1178600 1178600 0 7528 740 7802 18824 13316 13316 1 676390 0 KIETEVAGLK ALHAQQDRALTQTDRKIETEVAGLKTMLES TQTDRKIETEVAGLKTMLESHKLDNIKYLA R K I L K T 1 0 0 0 0 0 2 1 0 1 1 2 0 0 0 0 1 0 0 1 0 0 10 1 1086.6285 Q96AQ8 Q96AQ8 317 326 MCUR1 Mitochondrial calcium uniporter regulator 1 yes yes 2 0.0036445 125.57 By MS/MS 9 0 1 1 446940 446940 0 7529 2123 7803 18825 13317 13317 1 256500 0 KIEVLDSLQSK VTRENLEQEIAAMNKKIEVLDSLQSKAKLL AMNKKIEVLDSLQSKAKLLRNKAGWLDSEL K K I S K A 0 0 0 1 0 1 1 0 0 1 2 2 0 0 0 2 0 0 0 1 0 0 11 1 1258.7133 O95140 O95140 720 730 MFN2 Mitofusin-2 yes yes 2 0.051466 99.752 By MS/MS 5 0 1 1 1449600 1449600 0 7530 366 7804 18826 13318 13318 0 59583 0 KIFDIDEAEEGVKDLK DLNFFNQKKKKKKTKKIFDIDEAEEGVKDL IFDIDEAEEGVKDLKIESDVQEPTEPEDDL K K I L K I 1 0 0 3 0 0 3 1 0 2 1 3 0 1 0 0 0 0 0 1 0 0 16 2 1847.9517 P20042 P20042 87 102 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.0042178 101.3 By MS/MS 6 0 1 1 4082300 4082300 0 7531 638 7805 18827 13319 13319 1 31834 0 KIFRDEGGK KGADIMYTGTVDCWRKIFRDEGGKAFFKGA TVDCWRKIFRDEGGKAFFKGAWSNVLRGMG R K I G K A 0 1 0 1 0 0 1 2 0 1 0 2 0 1 0 0 0 0 0 0 0 0 9 2 1048.5665 P12236 P12236 260 268 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.0018052 162.97 By MS/MS 2.5 1.12 1 1 1 1 4 1778800 1778800 0 7532 563 7806 18828;18829;18830;18831 13320 13320 1 80238 0 KIGDEYFTFITDCKDPK REDDVGTGAGLLEIKKIGDEYFTFITDCKD GDEYFTFITDCKDPKACTILLRGASKEILS K K I P K A 0 0 0 3 1 0 1 1 0 2 0 3 0 2 1 0 2 0 1 0 0 0 17 2 2075.9874 P49368 P49368 354 370 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 1.8399E-09 162.64 By MS/MS 5.67 0.471 1 2 3 144720000 144720000 0 7533 916 7807 18832;18833;18834 13321;13322 13322 2 1140700 0 KIGVNQPK SLADSYLDEGFLLDKKIGVNQPKRIENAKI EGFLLDKKIGVNQPKRIENAKILIANTGMD K K I P K R 0 0 1 0 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 1 0 0 8 1 882.5287 P78371 P78371 223 230 CCT2 T-complex protein 1 subunit beta yes yes 2 0.018174 138.24 By MS/MS 6.5 0.5 1 1 2 6275900 6275900 0 7534 1195 7808 18835;18836 13323 13323 1 51084 0 KIHIDLPNEQAR DTLDPALLRPGRLDRKIHIDLPNEQARLDI LDRKIHIDLPNEQARLDILKIHAGPITKHG R K I A R L 1 1 1 1 0 1 1 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 12 1 1432.7787 P62333 P62333 298 309 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.00034921 138.2 By MS/MS 7 0 1 1 6696700 6696700 0 7535 1133 7809 18837 13324 13324 1 119670 0 KIHLTENGIR PISEHAVFNVDLMSKKIHLTENGIRVDIGD DLMSKKIHLTENGIRVDIGDTIIYLVH___ K K I I R V 0 1 1 0 0 0 1 1 1 2 1 1 0 0 0 0 1 0 0 0 0 0 10 1 1179.6724 Q9P2J5 Q9P2J5 1155 1164 LARS Leucine--tRNA ligase, cytoplasmic yes yes 3 0.0044422 82.831 By MS/MS 3 0 1 1 748850 748850 0 7536 2738 7810 18838 13325 13325 1 19549 0 KIHPQTIIAGWR LAAELLREAESLIAKKIHPQTIIAGWREAT IAKKIHPQTIIAGWREATKAAREALLSSAV K K I W R E 1 1 0 0 0 1 0 1 1 3 0 1 0 0 1 0 1 1 0 0 0 0 12 1 1418.8147 P78371 P78371 120 131 CCT2 T-complex protein 1 subunit beta yes yes 2 0.00055932 155.26 By MS/MS 6 0 1 1 7058400 7058400 0 7537 1195 7811 18839 13326 13326 1 55042 0 KIIATVLMTEDIK LGPRRSQQGPRKEPRKIIATVLMTEDIKLN PRKIIATVLMTEDIKLNKAEKAWKPSSKRT R K I I K L 1 0 0 1 0 0 1 0 0 3 1 2 1 0 0 0 2 0 0 1 0 0 13 1 1473.8477 Q04637 Q04637 714 726 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 2.1684E-05 174.23 By MS/MS 2.5 1.12 1 1 1 1 4 1916600 1916600 0 7538 1264 7812 18840;18841;18842;18843 13327;13328;13329 13329 1024 3 65270 0 KIIEDCSNSEETVK QNVADILFVRTSYVKKIIEDCSNSEETVKL KKIIEDCSNSEETVKLLRFCCWENPQFSST K K I V K L 0 0 1 1 1 0 3 0 0 2 0 2 0 0 0 2 1 0 0 1 0 0 14 1 1650.7771 Q93008 Q93008 2288 2301 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2;3 0.0024773 160.22 By MS/MS 1.67 0.471 1 2 3 600950 600950 0 7539 2096 7813 18844;18845;18846 13330;13331 13331 2 29840 0 KIIETPGIR LFFAFLQTGNYKEAKKIIETPGIRARSARL NYKEAKKIIETPGIRARSARLQWFCDRCVA K K I I R A 0 1 0 0 0 0 1 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 9 1 1025.6233 P42704 P42704 909 917 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.043576 117.81 By MS/MS By matching 4.4 1.02 1 2 1 1 3 2 2759200 2529300 229830 7540 854 7814 18847;18848;18849;18850;18851 13332 13332 1 68366 341330 KIIKDGEQHEDLNEVAK GIVLWNIFNRMPIARKIIKDGEQHEDLNEV IKDGEQHEDLNEVAKLFNIHED________ R K I A K L 1 0 1 2 0 1 3 1 1 2 1 3 0 0 0 0 0 0 0 1 0 0 17 2 1965.0167 O95831 O95831 590 606 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3;4 0.00032812 120.77 By MS/MS 5.5 0.5 2 2 4 26269000 26269000 0 7541 409 7815 18852;18853;18854;18855 13333;13334 13334 2 930660 0 KIKEGVEEAAK VKESLHEVSKSDLGRKIKEGVEEAAKTAKQ DLGRKIKEGVEEAAKTAKQSAESVSKGGEK R K I A K T 2 0 0 0 0 0 3 1 0 1 0 3 0 0 0 0 0 0 0 1 0 0 11 2 1200.6714 O43615 O43615 144 154 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 0.00033249 170.89 By MS/MS By matching 7.2 0.4 4 1 3 2 22568000 22540000 27743 7542 209 7816 18856;18857;18858;18859;18860 13335;13336 13336 2 450330 113890 KILEVHIDK DRCKSCNGRKIVREKKILEVHIDKGMKDGQ KIVREKKILEVHIDKGMKDGQKITFHGEGD K K I D K G 0 0 0 1 0 0 1 0 1 2 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1093.6495 P31689 P31689 206 214 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 0.0030819 115.78 By MS/MS 6.8 0.748 2 2 1 5 8769200 8769200 0 7543 755 7817 18861;18862;18863;18864;18865 13337;13338;13339 13337 3 98206 0 KILQDGGLQVVEK LRKVLISDSLDPCCRKILQDGGLQVVEKQN CRKILQDGGLQVVEKQNLSKEELIAELQDC R K I E K Q 0 0 0 1 0 2 1 2 0 1 2 2 0 0 0 0 0 0 0 2 0 0 13 1 1425.8191 O43175 O43175 21 33 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.0028679 134.56 By MS/MS 6.5 0.5 1 1 2 7818700 7818700 0 7544 185 7818 18866;18867 13340 13340 1 63436 0 KILREEGPK RAGQTTYSGVIDCFRKILREEGPKALWKGA VIDCFRKILREEGPKALWKGAGARVFRSSP R K I P K A 0 1 0 0 0 0 2 1 0 1 1 2 0 0 1 0 0 0 0 0 0 0 9 2 1068.6291 Q9UJS0 Q9UJS0 568 576 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.0016158 164.46 By MS/MS 5 0 1 1 1548900 1548900 0 7545 2798 7819 18868 13341 13341 1 63668 0 KINELTGIK RQIKQVEDDIQQLLKKINELTGIKESDTGL IQQLLKKINELTGIKESDTGLAPPALWDLA K K I I K E 0 0 1 0 0 0 1 1 0 2 1 2 0 0 0 0 1 0 0 0 0 0 9 1 1014.6073 P35998 P35998 58 66 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.030493 109.44 By MS/MS 7 0.816 1 1 1 3 2706000 2706000 0 7546 801 7820 18869;18870;18871 13342 13342 1 48797 0 KINPENSK WWSRLVSSDPEINTKKINPENSKLSDLDSE DPEINTKKINPENSKLSDLDSETRSMVEKM K K I S K L 0 0 2 0 0 0 1 0 0 1 0 2 0 0 1 1 0 0 0 0 0 0 8 1 928.49779 Q9Y266 Q9Y266 268 275 NUDC Nuclear migration protein nudC yes yes 2 0.0094541 154.12 By MS/MS 6.5 0.5 1 1 2 2765400 2765400 0 7547 2871 7821 18872;18873 13343 13343 1 46426 0 KINQLPEAER KSNNKENITIVDISRKINQLPEAERNLLEN VDISRKINQLPEAERNLLENGSVYVGLNAA R K I E R N 1 1 1 0 0 1 2 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 10 1 1196.6513 Q9H061 Q9H061 20 29 TMEM126A Transmembrane protein 126A yes yes 2;3 0.0041546 109.83 By MS/MS By matching 9 0 3 2 1 5225300 5211200 14103 7548 2447 7822 18874;18875;18876 13344;13345 13344 2 2990800 151990 KIQEESLR DLFPEADKVRTMLVRKIQEESLRTYLFTYS VRTMLVRKIQEESLRTYLFTYSSVYDSISM R K I L R T 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 1001.5506 Q99613;B5ME19 Q99613 782 789 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.0023123 180.93 By MS/MS By matching 5 1.07 3 2 1 1 6 1 14180000 14112000 67976 7549 2275 7823 18877;18878;18879;18880;18881;18882;18883 13346;13347;13348 13346 3 377470 142040 KIQGIEEYKK LLLGEDGAGKTSLIRKIQGIEEYKKGRGLE TSLIRKIQGIEEYKKGRGLEYLYLNVHDED R K I K K G 0 0 0 0 0 1 2 1 0 2 0 3 0 0 0 0 0 0 1 0 0 0 10 2 1234.6921 Q9Y6G9 Q9Y6G9 86 95 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 3 0.0022236 117.02 By MS/MS 6 0 1 1 5115600 5115600 0 7550 3005 7824 18884 13349 13349 1 39892 0 KIREESNTK QFHKNIIGKGGANIKKIREESNTKIDLPAE GGANIKKIREESNTKIDLPAENSNSETIII K K I T K I 0 1 1 0 0 0 2 0 0 1 0 2 0 0 0 1 1 0 0 0 0 0 9 2 1103.5935 Q00341 Q00341 606 614 HDLBP Vigilin yes yes 2 0.019758 125.71 By MS/MS 3 0 1 1 28258 28258 0 7551 1231 7825 18885 13350 13350 1 737.67 0 KISSIQSIVPALEIANAHR QKCEFQDAYVLLSEKKISSIQSIVPALEIA IQSIVPALEIANAHRKPLVIIAEDVDGEAL K K I H R K 3 1 1 0 0 1 1 0 1 4 1 1 0 0 1 3 0 0 0 1 0 0 19 1 2046.1586 P10809 P10809 250 268 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3;4 7.1351E-05 122.16 By MS/MS 6 0 2 2 39098000 39098000 0 7552 544 7826 18886;18887 13351;13352 13351 2 304890 0 KITEAIGIISK EMLVQYLQDAYSFSRKITEAIGIISKMMYE SFSRKITEAIGIISKMMYENTTTVVQEVIE R K I S K M 1 0 0 0 0 0 1 1 0 4 0 2 0 0 0 1 1 0 0 0 0 0 11 1 1171.7176 Q15021 Q15021 633 643 NCAPD2 Condensin complex subunit 1 yes yes 2 0.00013517 171.67 By MS/MS 4 0.816 1 1 1 3 2066700 2066700 0 7553 1464 7827 18888;18889;18890 13353 13353 1 55959 0 KITGLCQEEHR LLSQFIRPHGGMLPRKITGLCQEEHRKIEE MLPRKITGLCQEEHRKIEECVKMAHRAGLL R K I H R K 0 1 0 0 1 1 2 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1369.6772 Q9NVS2 Q9NVS2 103 113 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 3 0.0024348 120.86 By MS/MS 9.5 0.5 1 1 2 735370 735370 0 7554 2660 7828 18891;18892 13354 13354 1 489760 0 KITIADCGQLE EAMERFGSRNGKTSKKITIADCGQLE____ KTSKKITIADCGQLE_______________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 1.8539E-06 187.16 By MS/MS 10 0 1 1 10443000 10443000 0 7555 1163 7829 18893 13355 13355 1 11100000 0 KITIGQAPTEK ITWQRVLDTNDRFLRKITIGQAPTEKGHTR RFLRKITIGQAPTEKGHTRTAQFDISVASE R K I E K G 1 0 0 0 0 1 1 1 0 2 0 2 0 0 1 0 2 0 0 0 0 0 11 1 1184.6765 P11586 P11586 543 553 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.00025811 166.86 By MS/MS By matching 4.25 0.433 3 1 3 1 4395800 4369000 26739 7556 556 7830 18894;18895;18896;18897 13356;13357 13356 2 123520 55874 KITIGQGNTEK ITWQRVLDTNDRFLRKITIGQGNTEKGHYR RFLRKITIGQGNTEKGHYRQAQFDIAVASE R K I E K G 0 0 1 0 0 1 1 2 0 2 0 2 0 0 0 0 2 0 0 0 0 0 11 1 1187.651 Q6UB35 Q6UB35 586 596 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2;3 3.7271E-05 175.49 By MS/MS By MS/MS 4.25 0.433 3 1 3 1 4880600 4675900 204720 7557 1726 7831 18898;18899;18900;18901 13358;13359;13360 13359 3 131620 427780 KIVFVTGNAK ______________________________ SLVGKKIVFVTGNAKKLEEVVQILGDKFPC K K I A K K 1 0 1 0 0 0 0 1 0 1 0 2 0 1 0 0 1 0 0 2 0 0 10 1 1075.639 Q9BY32 Q9BY32 9 18 ITPA Inosine triphosphate pyrophosphatase yes yes 2 0.029136 114.86 By MS/MS 9 0 1 1 0 0 0 7558 2406 7832 18902 13361 13361 1 0 0 KIVITDCGQLS KKIESFGSKSGRTSKKIVITDCGQLS____ RTSKKIVITDCGQLS_______________ K K I L S - 0 0 0 1 1 1 0 1 0 2 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1232.6435 P30405 P30405 197 207 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 2 0.022035 104.82 By MS/MS 9 0 1 1 1339100 1339100 0 7559 740 7833 18903 13362 13362 1 768540 0 KIVNSAQTGSFK PPTPAEIPRAIQSLKKIVNSAQTGSFKQLT SLKKIVNSAQTGSFKQLTVKEAVLNGLVAT K K I F K Q 1 0 1 0 0 1 0 1 0 1 0 2 0 1 0 2 1 0 0 1 0 0 12 1 1278.6932 O75964 O75964 55 66 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 1.783E-32 262.07 By MS/MS 10 0 1 1 427260 427260 0 7560 341 7834 18904 13363 13363 1 454130 0 KIYEDGDDDMKR DTETDPSEGLMNVLKKIYEDGDDDMKRTIN VLKKIYEDGDDDMKRTINKAWVESREKQAK K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 3 0.0007119 132.86 By MS/MS 8 0 1 1 663120 663120 0 7561 2549 7835 18905 13364 13364 1 43746 0 KIYSTLAGTR FNGFNSLLNNMELIRKIYSTLAGTRKDVEV MELIRKIYSTLAGTRKDVEVTKEEFVLAAQ R K I T R K 1 1 0 0 0 0 0 1 0 1 1 1 0 0 0 1 2 0 1 0 0 0 10 1 1108.6241 Q9UJS0;O75746 Q9UJS0 235 244 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 0.0018445 145.89 By MS/MS 5 0 1 1 11237000 11237000 0 7562 2798;327 7836 18906 13365 13365 1 461880 0 KKDEEFQR DEGQEELEEVQAELKKKDEEFQRTKLLNGP EVQAELKKKDEEFQRTKLLNGPGDVETGTS K K K Q R T 0 1 0 1 0 1 2 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 8 2 1078.5407 Q9HC07 Q9HC07 199 206 TMEM165 Transmembrane protein 165 yes yes 2 0.039369 138.06 By MS/MS 1 0 1 1 770590 770590 0 7563 2555 7837 18907 13366 13366 1 37650 0 KKELEEIVQPIISK LESHQDADIEDFKAKKKELEEIVQPIISKL KKKELEEIVQPIISKLYGSAGPPPTGEEDT K K K S K L 0 0 0 0 0 1 3 0 0 3 1 3 0 0 1 1 0 0 0 1 0 0 14 2 1652.9713 P11021 P11021 620 633 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 3.0451E-34 260.5 By MS/MS 5 0.707 1 2 1 4 23583000 23583000 0 7564 545 7838 18908;18909;18910;18911 13367;13368 13368 2 906850 0 KKETISTANK VLTANIQDLKEEYSRKKETISTANKANAER EEYSRKKETISTANKANAERLKRLQKSADL R K K N K A 1 0 1 0 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 0 0 0 10 2 1118.6295 Q9HBM1 Q9HBM1 113 122 SPC25 Kinetochore protein Spc25 yes yes 2 0.0025443 152.54 By MS/MS 8 0 1 1 236260 236260 0 7565 2554 7839 18912 13369 13369 1 15586 0 KKETITESAGR RLKAEVEKQSKKLEKKKETITESAGRQQKK KLEKKKETITESAGRQQKKKIERQEEKLKN K K K G R Q 1 1 0 0 0 0 2 1 0 1 0 2 0 0 0 1 2 0 0 0 0 0 11 2 1218.6568 Q9UM00 Q9UM00 104 114 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 2;3 0.00086486 161.19 By MS/MS 9.33 0.471 2 1 3 2604200 2604200 0 7566 2831 7840 18913;18914;18915 13370;13371;13372 13371 3 1523200 0 KKLGELTGTVK KTIESETVRTSEVLRKKLGELTGTVKESLH EVLRKKLGELTGTVKESLHEVSKSDLGRKI R K K V K E 0 0 0 0 0 0 1 2 0 0 2 3 0 0 0 0 2 0 0 1 0 0 11 2 1172.7129 O43615 O43615 120 130 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.0098464 102.05 By MS/MS 7 0 1 1 3113200 3113200 0 7567 209 7841 18916 13373 13373 1 55633 0 KKVTAVHK RIAEYAFKLAQESGRKKVTAVHKANIMKLG LAQESGRKKVTAVHKANIMKLGDGLFLQCC R K K H K A 1 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 2 0 0 8 2 909.57599 P51553 P51553 214 221 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 2 0.011561 167.9 By MS/MS 7 0 1 1 116200 116200 0 7568 966 7842 18917 13374 13374 1 2076.5 0 KLALQLHPDRNPDDPQAQEK VPRSASIKDIKKAYRKLALQLHPDRNPDDP LHPDRNPDDPQAQEKFQDLGAAYEVLSDSE R K L E K F 2 1 1 3 0 3 1 0 1 0 3 2 0 0 3 0 0 0 0 0 0 0 20 2 2312.1873 Q9UBS4 Q9UBS4 47 66 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 3 0.034918 58.635 By MS/MS 7 0 1 1 1257300 1257300 0 7569 2756 7843 18918 13375 13375 1 22468 0 KLAQALLEQGGR KCGPITSTTRFIFEKKLAQALLEQGGRLSS FEKKLAQALLEQGGRLSSFYHHEAGVTALS K K L G R L 2 1 0 0 0 2 1 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 1 1282.7357 Q86XL3 Q86XL3 105 116 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.010785 117.14 By MS/MS 4 0 1 1 697060 697060 0 7570 1841 7844 18919 13376 13376 1 19029 0 KLAVNMVPFPR TTCLRFPGQLNADLRKLAVNMVPFPRLHFF ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG R K L P R L 1 1 1 0 0 0 0 0 0 0 1 1 1 1 2 0 0 0 0 2 0 0 11 1 1270.722 P07437;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q13885;Q9BVA1;P04350;Q13509;Q3ZCM7;Q9BUF5 P68371 252 262 TUBB;TUBB1;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 2 1.6841E-10 209.58 By MS/MS 7.2 1.17 2 1 1 1 5 82996000 82996000 0 7571 1187;490;1400;2375;451;1377;2363;1572 7845;7846 18920;18921;18922;18923;18924 13377;13378;13379;13380 13380 235 4 735270 0 KLAYQVLAEK PKIVGRTKDVKEAVRKLAYQVLAEKVHMRA KEAVRKLAYQVLAEKVHMRAMSIAQRVMLL R K L E K V 2 0 0 0 0 1 1 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 10 1 1161.6758 Q9BPX3 Q9BPX3 226 235 NCAPG Condensin complex subunit 3 yes yes 2 0.0028212 135.43 By MS/MS 4 0 1 1 492470 492470 0 7572 2302 7847 18925 13381 13381 1 13444 0 KLDALCNIHENIR HVALLAKHAIVICNRKLDALCNIHENIRVK NRKLDALCNIHENIRVKSGAWDESGVFIYT R K L I R V 1 1 2 1 1 0 1 0 1 2 2 1 0 0 0 0 0 0 0 0 0 0 13 1 1594.825 P53621 P53621 517 529 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.0019166 113.69 By MS/MS 2.67 1.25 1 1 1 3 3482600 3482600 0 7573 1005 7848 18926;18927;18928 13382;13383 13383 2 101920 0 KLDDAIEDCTNAVK AKLYCNRGTVNSKLRKLDDAIEDCTNAVKL RKLDDAIEDCTNAVKLDDTYIKAYLRRAQC R K L V K L 2 0 1 3 1 0 1 0 0 1 1 2 0 0 0 0 1 0 0 1 0 0 14 1 1590.7559 Q99615 Q99615 309 322 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 3.1184E-17 215.02 By MS/MS 6 0 1 1 4430200 4430200 0 7574 2276 7849 18929 13384 13384 1 34547 0 KLDDAIEDCTNAVKLDDTYIK AKLYCNRGTVNSKLRKLDDAIEDCTNAVKL EDCTNAVKLDDTYIKAYLRRAQCYMDTEQY R K L I K A 2 0 1 5 1 0 1 0 0 2 2 3 0 0 0 0 2 0 1 1 0 0 21 2 2439.1839 Q99615 Q99615 309 329 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 9.2698E-25 200.73 By MS/MS 6 0 1 1 9397600 9397600 0 7575 2276 7850 18930 13385 13385 1 73283 0 KLDDTDPVPR KEQEAKYQASHPNLRKLDDTDPVPRGAGSA HPNLRKLDDTDPVPRGAGSAMSTDAYPKNP R K L P R G 0 1 0 3 0 0 0 0 0 0 1 1 0 0 2 0 1 0 0 1 0 0 10 1 1154.5932 O95721 O95721 169 178 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.014434 111.61 By MS/MS 8 0 1 1 1425000 1425000 0 7576 403 7851 18931 13386 13386 1 94007 0 KLDEAVAEAHLGK THPDKYPVGVHFLPKKLDEAVAEAHLGKLN PKKLDEAVAEAHLGKLNVKLTKLTEKQAQY K K L G K L 3 0 0 1 0 0 2 1 1 0 2 2 0 0 0 0 0 0 0 1 0 0 13 1 1379.7409 P23526 P23526 389 401 AHCY Adenosylhomocysteinase yes yes 2;3 0.0024483 117.27 By MS/MS 7.33 0.471 2 1 3 9428900 9428900 0 7577 670 7852 18932;18933;18934 13387;13388 13387 2 178950 0 KLDEQYQK FMKQPGNETADTVLKKLDEQYQKYKFMELN TADTVLKKLDEQYQKYKFMELNLAQKKRRL K K L Q K Y 0 0 0 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 8 1 1050.5346 P61758 P61758 52 59 VBP1 Prefoldin subunit 3 yes yes 2 2.0189E-08 231.3 By MS/MS 9 0 1 1 2426400 2426400 0 7578 1105 7853 18935 13389 13389 1 1392500 0 KLDLSDTK KEIQTTTGNQQVLVRKLDLSDTKSIRAFAK NQQVLVRKLDLSDTKSIRAFAKGFLAEEKH R K L T K S 0 0 0 2 0 0 0 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 8 1 918.50221 Q8TC12;Q96NR8 Q8TC12 98 105 RDH11;RDH12 Retinol dehydrogenase 11;Retinol dehydrogenase 12 yes no 2 0.03062 139.97 By MS/MS By matching 8 0 2 1 1 14377000 14338000 38434 7579 1992 7854 18936;18937 13390 13390 1 945880 327890 KLDPELHLDIK ATVKILITTVPPNLRKLDPELHLDIKVLQS PNLRKLDPELHLDIKVLQSALAAIRHARWF R K L I K V 0 0 0 2 0 0 1 0 1 1 3 2 0 0 1 0 0 0 0 0 0 0 11 1 1319.7449 Q12905 Q12905 186 196 ILF2 Interleukin enhancer-binding factor 2 yes yes 3 0.0049758 100.09 By MS/MS 7 0 1 1 1605200 1605200 0 7580 1314 7855 18938 13391 13391 1 28685 0 KLDPGSEETQTLVR LSPDWQVDYESYTWRKLDPGSEETQTLVRE RKLDPGSEETQTLVREYFSWEGAFQHVGKA R K L V R E 0 1 0 1 0 1 2 1 0 0 2 1 0 0 1 1 2 0 0 1 0 0 14 1 1571.8155 P26641 P26641 401 414 EEF1G Elongation factor 1-gamma yes yes 2;3 3.0706E-07 194.86 By MS/MS By matching 7.6 1.62 4 2 2 2 8 2 196350000 196280000 69051 7581 700 7856 18939;18940;18941;18942;18943;18944;18945;18946;18947;18948 13392;13393;13394;13395;13396;13397;13398;13399 13394 8 3022400 211770 KLEAAEDIAYQLSR ANSLATAGDGLIELRKLEAAEDIAYQLSRS RKLEAAEDIAYQLSRSRNITYLPAGQSVLL R K L S R S 3 1 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 1 0 0 0 14 1 1605.8362 P35232 P35232 240 253 PHB Prohibitin yes yes 2;3 4.4511E-05 203.74 By MS/MS By matching 8.4 0.49 3 2 4 1 18841000 18798000 43109 7582 782 7857 18949;18950;18951;18952;18953 13400;13401 13400 2 1489000 367770 KLECLPPEPSPDDPESVK AEERRRQNLQEEKERKLECLPPEPSPDDPE CLPPEPSPDDPESVKIIFKLPNDSRVERRF R K L V K I 0 0 0 2 1 0 3 0 0 0 2 2 0 0 5 2 0 0 0 1 0 0 18 1 2035.9772 Q96CS3 Q96CS3 346 363 FAF2 FAS-associated factor 2 yes yes 2 0.016073 118.52 By MS/MS 6 0 1 1 5142600 5142600 0 7583 2140 7858 18954 13402 13402 1 40102 0 KLEEEGEQFVKK SDGFKANLVFKEIEKKLEEEGEQFVKKIGG IEKKLEEEGEQFVKKIGGIFAFKVKDGPGG K K L K K I 0 0 0 0 0 1 4 1 0 0 1 3 0 1 0 0 0 0 0 1 0 0 12 2 1462.7668 P22307 P22307 443 454 SCP2 Non-specific lipid-transfer protein yes yes 3 0.034807 74.237 By MS/MS 10 0 1 1 261220 261220 0 7584 657 7859 18955 13403 13403 1 277650 0 KLEEVERK AKREEELREYQERVKKLEEVERKKRQRELE EYQERVKKLEEVERKKRQRELEIEERERRR K K L R K K 0 1 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 2 1029.5819 Q14152 Q14152 850 857 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0036557 138.98 By MS/MS By matching 3.33 0.471 2 1 2 1 2436600 2408900 27686 7585 1409 7860 18956;18957;18958 13404 13404 1 63103 39679 KLEQCNTELK AFEKYQTLSLKQLFRKLEQCNTELKKYSHV KQLFRKLEQCNTELKKYSHVNKKALDQFVN R K L L K K 0 0 1 0 1 1 2 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 10 1 1261.6336 Q9UQE7 Q9UQE7 968 977 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0041725 120.27 By MS/MS 3.5 0.5 1 1 2 848770 848770 0 7586 2860 7861 18959;18960 13405 13405 1 22480 0 KLEQCNTELKK AFEKYQTLSLKQLFRKLEQCNTELKKYSHV QLFRKLEQCNTELKKYSHVNKKALDQFVNF R K L K K Y 0 0 1 0 1 1 2 0 0 0 2 3 0 0 0 0 1 0 0 0 0 0 11 2 1389.7286 Q9UQE7 Q9UQE7 968 978 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.00016882 164.65 By MS/MS 3 0 1 1 1226400 1226400 0 7587 2860 7862 18961 13406 13406 1 32016 0 KLFADAEEEQR EILNKYVGESEANIRKLFADAEEEQRRLGA ANIRKLFADAEEEQRRLGANSGLHIIIFDE R K L Q R R 2 1 0 1 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 11 1 1334.6466 P46459 P46459 304 314 NSF Vesicle-fusing ATPase yes yes 2;3 0.0023463 103.43 By MS/MS 5 0 2 2 2628400 2628400 0 7588 881 7863 18962;18963 13407;13408 13408 2 108040 0 KLFADAEEEQRR EILNKYVGESEANIRKLFADAEEEQRRLGA NIRKLFADAEEEQRRLGANSGLHIIIFDEI R K L R R L 2 2 0 1 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 12 2 1490.7478 P46459 P46459 304 315 NSF Vesicle-fusing ATPase yes yes 2;3 0.00072066 157.97 By MS/MS 5.75 0.829 2 1 1 4 9717800 9717800 0 7589 881 7864 18964;18965;18966;18967 13409;13410 13410 2 324880 0 KLFNLSKEDDVR TVPRRLGPKRASRIRKLFNLSKEDDVRQYV RIRKLFNLSKEDDVRQYVVRKPLNKEGKKP R K L V R Q 0 1 1 2 0 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 12 2 1462.778 P62753 P62753 143 154 RPS6 40S ribosomal protein S6 yes yes 3 0.013812 85.672 By MS/MS 8 0 1 1 3528900 3528900 0 7590 1143 7865 18968 13411 13411 1 232800 0 KLFVQDLATR EETVAKELQTLHNLRKLFVQDLATRVKKSA LHNLRKLFVQDLATRVKKSAEIDSDDTGGS R K L T R V 1 1 0 1 0 1 0 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 1 1189.6819 P33176 P33176 801 810 KIF5B Kinesin-1 heavy chain yes yes 2 0.0031226 131.82 By MS/MS 4 0 1 1 972830 972830 0 7591 767 7866 18969 13412 13412 1 26557 0 KLGGSLADSYLDEGFLLDKK RLKGSGNLEAIHIIKKLGGSLADSYLDEGF LADSYLDEGFLLDKKIGVNQPKRIENAKIL K K L K K I 1 0 0 3 0 0 1 3 0 0 5 3 0 1 0 2 0 0 1 0 0 0 20 2 2168.1365 P78371 P78371 204 223 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 1.6539E-08 170.11 By MS/MS 6 0 5 5 83624000 83624000 0 7592 1195 7867 18970;18971;18972;18973;18974 13413;13414;13415;13416;13417 13414 5 652100 0 KLGGTIDDCELVEGLVLTQK ATATSVDLRDIKIVKKLGGTIDDCELVEGL IDDCELVEGLVLTQKVSNSGITRVEKAKIG K K L Q K V 0 0 0 2 1 1 2 3 0 1 4 2 0 0 0 0 2 0 0 2 0 0 20 1 2187.1457 P50991 P50991 213 232 CCT4 T-complex protein 1 subunit delta yes yes 2;3 6.1772E-18 185.14 By MS/MS 6 0 3 3 129680000 129680000 0 7593 956 7868 18975;18976;18977 13418;13419;13420 13419 3 1011200 0 KLGNPMTPTEK DTIEQLREAILVSRKKLGNPMTPTEKKQWN VSRKKLGNPMTPTEKKQWNHVCEQFQENIR K K L E K K 0 0 1 0 0 0 1 1 0 0 1 2 1 0 2 0 2 0 0 0 0 0 11 1 1214.6329 Q9NX36 Q9NX36 280 290 DNAJC28 DnaJ homolog subfamily C member 28 yes yes 2 0.035046 85.731 By MS/MS 6 0 1 1 520260 520260 0 7594 2677 7869 18978 13421 13421 1576 0 4057 0 KLGPEGELLIR LGLVVFAIVFGVALRKLGPEGELLIRFFNS VALRKLGPEGELLIRFFNSFNEATMVLVSW R K L I R F 0 1 0 0 0 0 2 2 0 1 3 1 0 0 1 0 0 0 0 0 0 0 11 1 1223.7238 Q15758 Q15758 247 257 SLC1A5 Neutral amino acid transporter B(0) yes yes 3 0.0088513 93.839 By MS/MS 5 0 1 1 2484400 2484400 0 7595 1518 7870 18979 13422 13422 1 102120 0 KLGSKDVVIK GYVAKSPDEAYAIAKKLGSKDVVIKAQVLA YAIAKKLGSKDVVIKAQVLAGGRGKGTFES K K L I K A 0 0 0 1 0 0 0 1 0 1 1 3 0 0 0 1 0 0 0 2 0 0 10 2 1085.6808 Q9P2R7 Q9P2R7 89 98 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 3 0.040202 76.943 By MS/MS 7 0 1 1 389670 389670 0 7596 2741 7871 18980 13423 13423 1 6963.5 0 KLLDIVAR VQGSTSKHEFQAETKKLLDIVARSLYSEKE EFQAETKKLLDIVARSLYSEKEVFIRELIS K K L A R S 1 1 0 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 1 926.5913 Q12931 Q12931 96 103 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.037317 120.15 By MS/MS 5 0 1 1 3207500 3207500 0 7597 1316 7872 18981 13424 13424 1 131840 0 KLLEGEECR MNVKLALDVEIATYRKLLEGEECRMSGDLS EIATYRKLLEGEECRMSGDLSSNVTVSVTS R K L C R M 0 1 0 0 1 0 3 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1132.5547 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;P12036;CON__P02538;P02538;CON__O95678;O95678;CON__P07744;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46 CON__P35908v2 482 490 KRT2;NEFH;KRT6A;KRT75;KRT6C;KRT6B;KRT5;KRT74;KRT73 Keratin, type II cytoskeletal 2 epidermal;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73 no no 2;3 0.0017928 128.27 By MS/MS By MS/MS 5.33 2.36 1 1 2 1 3 2 2 1 2 2 13 979090 126800 852290 + 7598 52;50;36;53;449;61;57 7873 18982;18983;18984;18985;18986;18987;18988;18989;18990;18991;18992;18993;18994;18995;18996 13425;13426;13427;13428;13429 13426 5 72772 2590400 KLLMMAGIDDCYTSAR PAPRGTGIVSAPVPKKLLMMAGIDDCYTSA LLMMAGIDDCYTSARGCTATLGNFAKATFD K K L A R G 2 1 0 2 1 0 0 1 0 1 2 1 2 0 0 1 1 0 1 0 0 0 16 1 1843.8631 P15880 P15880 212 227 RPS2 40S ribosomal protein S2 yes yes 3 0.0074306 72.819 By MS/MS 8 0 1 1 870270 870270 0 7599 602 7874 18997 13430 13430 386;387 1 57412 0 KLLTEEGQK APETAVKFWAYEQYKKLLTEEGQKIGTFER AYEQYKKLLTEEGQKIGTFERFISGSMAGA K K L Q K I 0 0 0 0 0 1 2 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 9 1 1044.5815 Q6NUK1 Q6NUK1 277 285 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.0044479 138.98 By MS/MS 7 0 1 1 1741500 1741500 0 7600 1690 7875 18998 13431 13431 1 31121 0 KLLYPLQEVER QAFAEVLRLPKQQLRKLLYPLQEVERFLAP QQLRKLLYPLQEVERFLAPYGRQDLHLRIF R K L E R F 0 1 0 0 0 1 2 0 0 0 3 1 0 0 1 0 0 0 1 1 0 0 11 1 1386.7871 Q8N3Z3 Q8N3Z3 46 56 GTPBP8 GTP-binding protein 8 yes yes 3 0.03238 75.819 By MS/MS 8 0 1 1 810650 810650 0 7601 1912 7876 18999 13432 13432 0 53478 0 KLNEILQAR MFAKGTEITHAVVIKKLNEILQARGKKGTD HAVVIKKLNEILQARGKKGTDRAAQIELLQ K K L A R G 1 1 1 0 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1083.64 Q99613;B5ME19 Q99613 332 340 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.0010616 159.28 By MS/MS By matching 4.33 0.471 4 2 4 2 9817800 9751600 66190 7602 2275 7877 19000;19001;19002;19003;19004;19005 13433;13434;13435 13433 3 281440 138310 KLNEQSPTR RDLQQYQSQAKQLFRKLNEQSPTRCTLEAG AKQLFRKLNEQSPTRCTLEAGAMTFHYIIE R K L T R C 0 1 1 0 0 1 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 9 1 1071.5673 O75396 O75396 43 51 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0025868 149.57 By MS/MS By matching 8.8 0.748 2 2 1 3 2 3842900 3827000 15920 7603 304 7878 19006;19007;19008;19009;19010 13436;13437 13436 2 1807700 158700 KLNQGTER FDAKNPFLAAVTTNRKLNQGTERHLMHLEL AAVTTNRKLNQGTERHLMHLELDISDSKIR R K L E R H 0 1 1 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 8 1 944.50394 P16435 P16435 291 298 POR NADPH--cytochrome P450 reductase yes yes 2 0.053062 123.72 By MS/MS 5.5 0.5 1 1 2 1373400 1373400 0 7604 607 7879 19011;19012 13438 13438 1 49191 0 KLNVTEQEKIDK VEHINKTIAPALVSKKLNVTEQEKIDKLMI VSKKLNVTEQEKIDKLMIEMDGTENKSKFG K K L D K L 0 0 1 1 0 1 2 0 0 1 1 3 0 0 0 0 1 0 0 1 0 0 12 2 1443.7933 P06733 P06733 81 92 ENO1 Alpha-enolase yes yes 3 0.00034958 138.89 By MS/MS By matching 6 0 2 1 1 4712500 4677200 35286 7605 482 7880 19013;19014 13439 13439 1 36473 108220 KLNYEENKEESLLEK EAVKRLKEKLEAEMKKLNYEENKEESLLEK KLNYEENKEESLLEKRRQLSRDIGRLKETY K K L E K R 0 0 2 0 0 0 5 0 0 0 3 3 0 0 0 1 0 0 1 0 0 0 15 2 1864.9418 O95347 O95347 467 481 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.0029042 92.773 By MS/MS 3.5 0.5 1 1 2 4949900 4949900 0 7606 385 7881 19015;19016 13440 13440 1 129510 0 KLQDKIEK ANSKADPSLNPEQLKKLQDKIEKCKQDVLK LNPEQLKKLQDKIEKCKQDVLKTKEKYEKS K K L E K C 0 0 0 1 0 1 1 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 8 2 1000.5917 Q9UNF0 Q9UNF0 189 196 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 3 0.0034784 136.8 By MS/MS 4 0 1 1 815760 815760 0 7607 2839 7882 19017 13441 13441 1 22269 0 KLQELSSK NLVLSVREVRQLTLRKLQELSSKADEASEL VRQLTLRKLQELSSKADEASELACPTPKED R K L S K A 0 0 0 0 0 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 8 1 931.53385 P49327 P49327 2186 2193 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0038424 172.94 By MS/MS 2.5 1.12 1 1 1 1 4 9041100 9041100 0 7608 915 7883 19018;19019;19020;19021 13442;13443 13442 2 385500 0 KLQFFCDPR EEYEAMPVEVKLLPRKLQFFCDPRKREQML VKLLPRKLQFFCDPRKREQMLTSPTQ____ R K L P R K 0 1 0 1 1 1 0 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 9 1 1209.5965 Q53H12 Q53H12 403 411 AGK Acylglycerol kinase, mitochondrial yes yes 3 0.0038874 134.25 By MS/MS 7 0 1 1 900810 900810 0 7609 1587 7884 19022 13444 13444 1 16098 0 KLQGEVEK ______________________________ MAELIQKKLQGEVEKYQQLQKDLSKSMSGR K K L E K Y 0 0 0 0 0 1 2 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 1 929.5182 O15212 O15212 8 15 PFDN6 Prefoldin subunit 6 yes yes 2 0.023862 132.76 By MS/MS 10 0 1 1 164670 164670 0 7610 159 7885 19023 13445 13445 1 175030 0 KLQMGQAAK ATVKMLQRRANTAIRKLQMGQAAKKTQELL ANTAIRKLQMGQAAKKTQELLERHSKGPLI R K L A K K 2 0 0 0 0 2 0 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 9 1 973.53789 Q5JTZ9 Q5JTZ9 861 869 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.010171 119.29 By MS/MS 4.5 0.5 1 1 2 232240 232240 0 7611 1611 7886 19024;19025 13446 13446 1195 1 6736.6 0 KLQQELEFLEVQEEYIKDEQK GPEPEDLEDLYSRYKKLQQELEFLEVQEEY EFLEVQEEYIKDEQKNLKKEFLHAQEEVKR K K L Q K N 0 0 0 1 0 4 6 0 0 1 3 3 0 1 0 0 0 0 1 1 0 0 21 2 2665.3487 P43686 P43686 46 66 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.00050712 98.443 By MS/MS 6 0 1 1 1702100 1702100 0 7612 867 7887 19026 13447 13447 1 13273 0 KLSEADNR VAQKREDAVSKEVTRKLSEADNRKMSRKEK VSKEVTRKLSEADNRKMSRKEKDERILWKK R K L N R K 1 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 1 931.47231 Q9UNL2 Q9UNL2 103 110 SSR3 Translocon-associated protein subunit gamma yes yes 2 0.010377 152.34 By MS/MS 3.8 2.79 1 1 1 1 1 5 1930200 1930200 0 7613 2844 7888 19027;19028;19029;19030;19031 13448;13449;13450 13450 3 719250 0 KLSEADNRK VAQKREDAVSKEVTRKLSEADNRKMSRKEK SKEVTRKLSEADNRKMSRKEKDERILWKKN R K L R K M 1 1 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 9 2 1059.5673 Q9UNL2 Q9UNL2 103 111 SSR3 Translocon-associated protein subunit gamma yes yes 2;3 0.018035 123.21 By MS/MS By matching 7.83 3.08 1 4 1 4 2 3561900 3519100 42841 7614 2844 7889 19032;19033;19034;19035;19036;19037 13451;13452;13453 13453 3 2031300 461700 KLSEEEILENPDLFLTSEATDYGR EALHLIDEMDLNGDKKLSEEEILENPDLFL NPDLFLTSEATDYGRQLHDDYFYHDEL___ K K L G R Q 1 1 1 2 0 0 5 1 0 1 4 1 0 1 1 2 2 0 1 0 0 0 24 1 2768.3392 Q14257 Q14257 282 305 RCN2 Reticulocalbin-2 yes yes 3 1.5822E-12 157.53 By MS/MS 6 0 1 1 3198000 3198000 0 7615 1426 7890 19038 13454 13454 1 24938 0 KLTPQGQR LEGLKMVEKDQDGGRKLTPQGQRDLDRIAG KDQDGGRKLTPQGQRDLDRIAGQVAAANKK R K L Q R D 0 1 0 0 0 2 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 8 1 926.52976 P39019 P39019 122 129 RPS19 40S ribosomal protein S19 yes yes 2 0.006558 161.68 By MS/MS 10 0 1 1 6918600 6918600 0 7616 823 7891 19039 13455 13455 1 7353800 0 KLTVNPGTK YPLEIDYGQDEEAVKKLTVNPGTKSKLPKP DEEAVKKLTVNPGTKSKLPKPVQDLIKMIF K K L T K S 0 0 1 0 0 0 0 1 0 0 1 2 0 0 1 0 2 0 0 1 0 0 9 1 956.56548 P09874 P09874 654 662 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0026951 148.94 By MS/MS 4.5 1.12 1 1 1 1 4 3829000 3829000 0 7617 521 7892 19040;19041;19042;19043 13456 13456 1 102430 0 KLVESLPQEIK EIKNYIQGINLVQAKKLVESLPQEIKANVA VQAKKLVESLPQEIKANVAKAEAEKIKAAL K K L I K A 0 0 0 0 0 1 2 0 0 1 2 2 0 0 1 1 0 0 0 1 0 0 11 1 1282.7497 P52815 P52815 163 173 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 1.3208E-28 256.24 By MS/MS By matching 8.33 0.471 2 1 2 1 11867000 11844000 22720 7618 993 7893 19044;19045;19046 13457 13457 1 3455600 193830 KLVIVGDGACGK ______________________________ IRKKLVIVGDGACGKTCLLIVFSKDQFPEV K K L G K T 1 0 0 1 1 0 0 3 0 1 1 2 0 0 0 0 0 0 0 2 0 0 12 1 1215.6645 P61586;P08134 P61586 7 18 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 2 0.00098052 150.15 By MS/MS 9 0 1 1 522190 522190 0 7619 1101;498 7894 19047 13458 13458 1 299690 0 KLVTDQNISENWR LGNICRSPIAEAVFRKLVTDQNISENWRVD FRKLVTDQNISENWRVDSAATSGYEIGNPP R K L W R V 0 1 2 1 0 1 1 0 0 1 1 1 0 0 0 1 1 1 0 1 0 0 13 1 1601.8162 P24666 P24666 29 41 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 3 0.0094192 88.224 By MS/MS 10 0 1 1 669560 669560 0 7620 679 7895 19048 13459 13459 1 711680 0 KLYPTVGKPSSS PIDRSVDFLLDSSLRKLYPTVGKPSSS___ SLRKLYPTVGKPSSS_______________ R K L S S - 0 0 0 0 0 0 0 1 0 0 1 2 0 0 2 3 1 0 1 1 0 0 12 2 1262.6871 Q9UDX5 Q9UDX5 155 166 MTFP1 Mitochondrial fission process protein 1 yes yes 2 0.018762 119.74 By MS/MS 9 0 1 1 1110400 1110400 0 7621 2763 7896 19049 13460 13460 1 637270 0 KMEEVKEANIR SLCISTKKEVEKMNKKMEEVKEANIRVVSE KMNKKMEEVKEANIRVVSEDFLQDVSASTK K K M I R V 1 1 1 0 0 0 3 0 0 1 0 2 1 0 0 0 0 0 0 1 0 0 11 2 1345.7024 P09874 P09874 442 452 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.004859 107.34 By MS/MS 4 0 2 2 3546600 3546600 0 7622 521 7897;7898 19050;19051 13461;13462 13461 315 2 96819 0 KMLTIDADKR LVEKADRREFIDLLKKMLTIDADKRITPIE IDLLKKMLTIDADKRITPIETLNHPFVTMT K K M K R I 1 1 0 2 0 0 0 0 0 1 1 2 1 0 0 0 1 0 0 0 0 0 10 2 1189.6489 Q9H2X6;Q86Z02 Q9H2X6 506 515 HIPK2;HIPK1 Homeodomain-interacting protein kinase 2;Homeodomain-interacting protein kinase 1 yes no 2 0.022258 111.06 By MS/MS 6 0 1 1 2336800 2336800 0 7623 1851 7899 19052 13463 13463 1278 1 18222 0 KMYLQAAIVR PQEMEQTRSAVDEDRKMYLQAAIVRIMKAR VDEDRKMYLQAAIVRIMKARKVLRHNALIQ R K M V R I 2 1 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 0 1 1 0 0 10 1 1191.6798 Q13617 Q13617 677 686 CUL2 Cullin-2 yes yes 3 0.053882 56.563 By MS/MS 7 0 1 1 341470 341470 0 7624 1388 7900 19053 13464 13464 0 6102.2 0 KNEELSVLLK TEARTLASMLREVERKNEELSVLLKAQQVE REVERKNEELSVLLKAQQVESERAQSDIEH R K N L K A 0 0 1 0 0 0 2 0 0 0 3 2 0 0 0 1 0 0 0 1 0 0 10 1 1171.6812 Q8TCG1 Q8TCG1 685 694 KIAA1524 Protein CIP2A yes yes 2 0.001662 147.73 By MS/MS 4 0 1 1 1382300 1382300 0 7625 1994 7901 19054 13465 13465 1 37735 0 KNGFVVLK AGASATFPMQCSALRKNGFVVLKGRPCKIV MQCSALRKNGFVVLKGRPCKIVEMSTSKTG R K N L K G 0 0 1 0 0 0 0 1 0 0 1 2 0 1 0 0 0 0 0 2 0 0 8 1 903.55419 P63241;Q6IS14;Q9GZV4 P63241 27 34 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 2 0.037392 138.85 By MS/MS 10 0 1 1 1416300 1416300 0 7626 1177 7902 19055 13466 13466 0 1505400 0 KNKEEAAEYAK QHKRRRIALKKQRTKKNKEEAAEYAKLLAK QRTKKNKEEAAEYAKLLAKRMKEAKEKRQE K K N A K L 3 0 1 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 11 2 1279.6408 P62753 P62753 201 211 RPS6 40S ribosomal protein S6 yes yes 2;3 0.0096836 131.42 By MS/MS 8 0 2 2 1037900 1037900 0 7627 1143 7903 19056;19057 13467;13468 13468 2 68473 0 KNPAAYENDK LIYTWGTEEFERSKRKNPAAYENDK_____ ERSKRKNPAAYENDK_______________ R K N D K - 2 0 2 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 10 1 1148.5462 O14949 O14949 73 82 UQCRQ Cytochrome b-c1 complex subunit 8 yes yes 3 0.032642 63.694 By MS/MS 9.5 0.5 1 1 2 125090 125090 0 7628 135 7904 19058;19059 13469 13469 1 123790 0 KNPDSQYGELIEK GYTHLSAGELLRDERKNPDSQYGELIEKYI ERKNPDSQYGELIEKYIKEGKIVPVEITIS R K N E K Y 0 0 1 1 0 1 2 1 0 1 1 2 0 0 1 1 0 0 1 0 0 0 13 1 1519.7518 P30085 P30085 43 55 CMPK1 UMP-CMP kinase yes yes 2 0.00016823 171.26 By MS/MS 9 0 1 1 355750 355750 0 7629 735 7905 19060 13470 13470 1 204170 0 KNTILPK AYEYADERLRINSLRKNTILPKILQDVADE RLRINSLRKNTILPKILQDVADEEIAALPR R K N P K I 0 0 1 0 0 0 0 0 0 1 1 2 0 0 1 0 1 0 0 0 0 0 7 1 812.51199 O60783 O60783 59 65 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 2 0.052885 143.85 By MS/MS 10 0 1 1 273240 273240 0 7630 265 7906 19061 13471 13471 1 290430 0 KNWVVTGADDMQIR EVCDLPVRAAKFVARKNWVVTGADDMQIRV RKNWVVTGADDMQIRVFNYNTLERVHMFEA R K N I R V 1 1 1 2 0 1 0 1 0 1 0 1 1 0 0 0 1 1 0 2 0 0 14 1 1631.809 P35606 P35606 69 82 COPB2 Coatomer subunit beta yes yes 3 0.025519 87.519 By MS/MS 1 0 1 1 349630 349630 0 7631 795 7907 19062 13472 13472 543 1 17082 0 KPAAAAAPGTAEK SAFCLLEAALAAEVKKPAAAAAPGTAEKLS VKKPAAAAAPGTAEKLSPKAATLAERSAGL K K P E K L 6 0 0 0 0 0 1 1 0 0 0 2 0 0 2 0 1 0 0 0 0 0 13 1 1181.6404 P50454 P50454 23 35 SERPINH1 Serpin H1 yes yes 2 4.6705E-07 185.3 By MS/MS 6.5 0.5 1 1 2 6729500 6729500 0 7632 947 7908 19063;19064 13473;13474 13473 2 67943 0 KPALVAK LREERLRQYAEKKAKKPALVAKSSILLDVK QYAEKKAKKPALVAKSSILLDVKPWDDETD K K P A K S 2 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 7 1 725.47996 P24534;P29692 P29692 189 195 EEF1B2;EEF1D Elongation factor 1-beta;Elongation factor 1-delta no no 1 0.053883 60.799 By MS/MS 8 0 1 1 540280 540280 0 7633 726;677 7909 19065 13475 13475 0 35642 0 KPASFMTSICDER VPMDYSWARELGLIRKPASFMTSICDERGQ IRKPASFMTSICDERGQELIYAGMPITEVF R K P E R G 1 1 0 1 1 0 1 0 0 1 0 1 1 1 1 2 1 0 0 0 0 0 13 1 1540.7014 P53396 P53396 836 848 ACLY ATP-citrate synthase yes yes 2;3 1.7982E-07 206.74 By MS/MS 4.33 0.471 2 1 3 7499500 7499500 0 7634 1001 7910 19066;19067;19068 13476;13477 13477 2 206570 0 KPDAYTEQLHNEEENEDAR LLYMAFLMLVDPLIRKPDAYTEQLHNEEEN YTEQLHNEEENEDARSMAAAAASLGGPRAN R K P A R S 2 1 2 2 0 1 5 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 19 1 2286.9989 Q9P0T7 Q9P0T7 118 136 TMEM9 Transmembrane protein 9 yes yes 3;4 0.0046079 80.541 By MS/MS 8 0.816 2 2 2 6 2005800 2005800 0 7635 2731 7911 19069;19070;19071;19072;19073;19074 13478;13479 13479 2 588520 0 KPEDWDERPK PPVNPSREIEDPEDRKPEDWDERPKIPDPE DPEDRKPEDWDERPKIPDPEAVKPDDWDED R K P P K I 0 1 0 2 0 0 2 0 0 0 0 2 0 0 2 0 0 1 0 0 0 0 10 2 1298.6255 P27824 P27824 283 292 CANX Calnexin yes yes 3 0.004056 107.11 By MS/MS 4 0 1 1 990980 990980 0 7636 711 7912 19075 13480 13480 1 27053 0 KPEENPASK DGKKDQDSRSAPEPKKPEENPASKFSSASK SAPEPKKPEENPASKFSSASKYAALSVDGE K K P S K F 1 0 1 0 0 0 2 0 0 0 0 2 0 0 2 1 0 0 0 0 0 0 9 1 998.50327 P23588 P23588 578 586 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0090239 126.24 By MS/MS By matching 5.67 0.471 1 2 1 2 950680 710670 240010 7637 672 7913 19076;19077;19078 13481 13481 1 5541.8 712020 KPESNAVTK RAKVEKKTEAAATTRKPESNAVTKTAGPIA AAATTRKPESNAVTKTAGPIASAQKQPAGK R K P T K T 1 0 1 0 0 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 9 1 972.52401 P27816 P27816 968 976 MAP4 Microtubule-associated protein 4 yes yes 2 0.022924 113.71 By MS/MS 2 0.816 1 1 1 3 381280 381280 0 7638 710 7914 19079;19080;19081 13482 13482 1 15137 0 KPGDLSDELR LYYEGKEFETRLKEKKPGDLSDELRISLGM RLKEKKPGDLSDELRISLGMPVGPNAHKVP K K P L R I 0 1 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 1 1128.5775 Q13435 Q13435 605 614 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.0024098 140.17 By MS/MS 3.5 0.5 1 1 2 2873800 2873800 0 7639 1369 7915 19082;19083 13483 13483 1 75389 0 KPHTESLELQVR TSAPVWDESASFLIRKPHTESLELQVRGEG LIRKPHTESLELQVRGEGTGVLGSLSLPLS R K P V R G 0 1 0 0 0 1 2 0 1 0 2 1 0 0 1 1 1 0 0 1 0 0 12 1 1435.7783 Q9BSJ8 Q9BSJ8 855 866 ESYT1 Extended synaptotagmin-1 yes yes 3 2.5581E-05 167.84 By MS/MS 3 0 1 1 1783300 1783300 0 7640 2339 7916 19084 13484 13484 1 46552 0 KPIGADSK KCFDKFCANTCVECRKPIGADSKEVHYKNR NTCVECRKPIGADSKEVHYKNRFWHDTCFR R K P S K E 1 0 0 1 0 0 0 1 0 1 0 2 0 0 1 1 0 0 0 0 0 0 8 1 814.45487 Q13642 Q13642 45 52 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.039557 119.41 By MS/MS 8 0 1 1 511510 511510 0 7641 1394 7917 19085 13485 13485 1 33744 0 KPITDDDVDR LMATILHLGKSSLPKKPITDDDVDRISLCL SSLPKKPITDDDVDRISLCLKVLSECSPLM K K P D R I 0 1 0 4 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 10 1 1172.5673 P53618 P53618 603 612 COPB1 Coatomer subunit beta yes yes 2 0.012257 113.44 By MS/MS 4 0 1 1 1653000 1653000 0 7642 1004 7918 19086 13486 13486 1 45126 0 KPITDDDVDRISLCLK LMATILHLGKSSLPKKPITDDDVDRISLCL PITDDDVDRISLCLKVLSECSPLMNDIFNK K K P L K V 0 1 0 4 1 0 0 0 0 2 2 2 0 0 1 1 1 0 0 1 0 0 16 2 1886.9772 P53618 P53618 603 618 COPB1 Coatomer subunit beta yes yes 3 0.0091248 86.214 By MS/MS 4 0 1 1 4799000 4799000 0 7643 1004 7919 19087 13487 13487 1 131010 0 KPLPDHVSIVEPK KIMLPWDPTGKIGPKKPLPDHVSIVEPKDE PKKPLPDHVSIVEPKDEILPTTPISEQKGG K K P P K D 0 0 0 1 0 0 1 0 1 1 1 2 0 0 3 1 0 0 0 2 0 0 13 1 1457.8242 P23396 P23396 202 214 RPS3 40S ribosomal protein S3 yes yes 2;3 0.00011312 166.11 By MS/MS By matching 8 0 3 2 1 3894300 3840500 53781 7644 668 7920 19088;19089;19090 13488;13489 13489 2 253350 458810 KPLVIIAEDVDGEALSTLVLNR IQSIVPALEIANAHRKPLVIIAEDVDGEAL EDVDGEALSTLVLNRLKVGLQVVAVKAPGF R K P N R L 2 1 1 2 0 0 2 1 0 2 4 1 0 0 1 1 1 0 0 3 0 0 22 1 2364.3264 P10809 P10809 269 290 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.037818 51.876 By MS/MS 6 0 1 1 805270 805270 0 7645 544 7921 19091 13490 13490 1 6279.5 0 KPNEGADGQWK AIQNKDRAKVEFNIRKPNEGADGQWKKGFV FNIRKPNEGADGQWKKGFVLHKSKSEEAHA R K P W K K 1 0 1 1 0 1 1 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 11 1 1228.5836 Q8NC51 Q8NC51 310 320 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 4.7829E-10 200.71 By MS/MS 6 0 1 1 2695100 2695100 0 7646 1949 7922 19092 13491 13491 1 21017 0 KPNVAEAGEQFGQLGR RYRLVSNKLKKRFLRKPNVAEAGEQFGQLG PNVAEAGEQFGQLGRELRAQECLPYAAWCQ R K P G R E 2 1 1 0 0 2 2 3 0 0 1 1 0 1 1 0 0 0 0 1 0 0 16 1 1699.8642 P23610 P23610 40 55 F8A1 Factor VIII intron 22 protein yes yes 3 0.040935 64.52 By MS/MS 6.5 0.5 1 1 2 1803900 1803900 0 7647 673 7923 19093;19094 13492 13492 1 24868 0 KPPLLNNADSVQAK SNRFYTLIPHDFGMKKPPLLNNADSVQAKV KKPPLLNNADSVQAKVEMLDNLLDIEVAYS K K P A K V 2 0 2 1 0 1 0 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 14 1 1493.8202 P09874 P09874 748 761 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 5.3103E-05 149.82 By MS/MS 4.5 1.12 2 2 2 2 8 8552300 8552300 0 7648 521 7924 19095;19096;19097;19098;19099;19100;19101;19102 13493;13494 13493 2 217420 0 KPPPSKEELLK TNPPLIQEKPAKTSKKPPPSKEELLKLTET KTSKKPPPSKEELLKLTETVVTEYLNSGNA K K P L K L 0 0 0 0 0 0 2 0 0 0 2 3 0 0 3 1 0 0 0 0 0 0 11 2 1264.7391 P78344 P78344 536 546 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 3 0.0095346 94.82 By MS/MS 4.5 0.5 1 1 2 2884200 2884200 0 7649 1192 7925 19103;19104 13495 13495 1 82583 0 KPTFMDEEVQSILTK RFSSEAAESGSPETKKPTFMDEEVQSILTK KPTFMDEEVQSILTKMTGLNLQKTFKPAIQ K K P T K M 0 0 0 1 0 1 2 0 0 1 1 2 1 1 1 1 2 0 0 1 0 0 15 1 1764.8968 P82650 P82650 67 81 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 0.0024446 117.48 By MS/MS 7 0 1 1 1121300 1121300 0 7650 1201 7926 19105 13496 13496 984 1 20037 0 KPTLDKPSPETFVK SVLPYFVATKLAKIRKPTLDKPSPETFVKS RKPTLDKPSPETFVKSAIKTVGLQSRTNGY R K P V K S 0 0 0 1 0 0 1 0 0 0 1 3 0 1 3 1 2 0 0 1 0 0 14 2 1585.8716 Q53GQ0 Q53GQ0 244 257 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 0.00010471 166.24 By MS/MS 8 0 2 2 22640000 22640000 0 7651 1584 7927 19106;19107 13497;13498 13498 2 1493600 0 KPVAGALDVSFNK QGWQADSTTRMVLPRKPVAGALDVSFNKFI PRKPVAGALDVSFNKFIPLSEPAPVPPIPN R K P N K F 2 0 1 1 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 2 0 0 13 1 1344.7402 Q99627 Q99627 166 178 COPS8 COP9 signalosome complex subunit 8 yes yes 2 0.00012106 165.35 By MS/MS 9 0 1 1 927000 927000 0 7652 2278 7928 19108 13499 13499 1 532010 0 KPVEELTEEEK SPEFKDPLIDKEYYRKPVEELTEEEKYVRE EYYRKPVEELTEEEKYVRELKKTQLIKAAP R K P E K Y 0 0 0 0 0 0 5 0 0 0 1 2 0 0 1 0 1 0 0 1 0 0 11 1 1329.6664 Q9Y2R9 Q9Y2R9 53 63 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 6.2739E-10 196.44 By MS/MS By matching 8 0 2 1 1 1238300 1188700 49689 7653 2899 7929 19109;19110 13500 13500 1 78415 423910 KPVEELTEEEKYVR SPEFKDPLIDKEYYRKPVEELTEEEKYVRE RKPVEELTEEEKYVRELKKTQLIKAAPAGK R K P V R E 0 1 0 0 0 0 5 0 0 0 1 2 0 0 1 0 1 0 1 2 0 0 14 2 1747.8992 Q9Y2R9 Q9Y2R9 53 66 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2;3 1.5162E-24 246.63 By MS/MS By matching 8.25 0.433 3 1 3 1 39342000 39274000 67689 7654 2899 7930 19111;19112;19113;19114 13501;13502;13503 13502 3 2795300 577470 KPVIVFVPSR MAKPVYHAITKHSPKKPVIVFVPSRKQTRL KHSPKKPVIVFVPSRKQTRLTAIDILTTCA K K P S R K 0 1 0 0 0 0 0 0 0 1 0 1 0 1 2 1 0 0 0 3 0 0 10 1 1140.7019 O75643 O75643 1557 1566 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0060209 118.71 By MS/MS 1 0 1 1 191690 191690 0 7655 322 7931 19115 13504 13504 1 9365.5 0 KPVSIVSPEPGTTR PPNAGKSSLVNLLSRKPVSIVSPEPGTTRD RKPVSIVSPEPGTTRDVLETPVDLAGFPVL R K P T R D 0 1 0 0 0 0 1 1 0 1 0 1 0 0 3 2 2 0 0 2 0 0 14 1 1466.8093 Q969Y2 Q969Y2 272 285 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2;3 0.018871 114.24 By MS/MS 6.75 0.829 2 1 1 4 6062400 6062400 0 7656 2111 7932 19116;19117;19118;19119 13505;13506;13507;13508 13505 3 106620 0 KPVSSYLR YLPRWFSSVLASCPKKPVSSYLRFSKEQLP VLASCPKKPVSSYLRFSKEQLPIFKAQNPD K K P L R F 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 2 0 0 1 1 0 0 8 1 948.53927 Q00059 Q00059 52 59 TFAM Transcription factor A, mitochondrial yes yes 3 0.011186 109.11 By MS/MS 9 0 1 1 350660 350660 0 7657 1229 7933 19120 13509 13509 1 201250 0 KPVTVSPTTPTSPTEGEAS KPVLDVHAELDRITRKPVTVSPTTPTSPTE VSPTTPTSPTEGEAS_______________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 Q9Y6G9 Q9Y6G9 505 523 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 6.7142E-05 160.48 By MS/MS 6 0 1 1 6677900 6677900 0 7658 3005 7934 19121 13510 13510 1 52075 0 KQALYEYAR FAKSSWARQESLQERKQALYEYARRRFTER ESLQERKQALYEYARRRFTERRAQEAD___ R K Q A R R 2 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 9 1 1140.5928 Q9Y679 Q9Y679 390 398 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.01122 120.31 By MS/MS 7 0 1 1 7151500 7151500 0 7659 2997 7935 19122 13511 13511 1 127800 0 KQAQILASEAEK SEGTRESAINVAEGKKQAQILASEAEKAEQ EGKKQAQILASEAEKAEQINQAAGEASAVL K K Q E K A 3 0 0 0 0 2 2 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 12 1 1314.7143 Q9UJZ1 Q9UJZ1 222 233 STOML2 Stomatin-like protein 2, mitochondrial yes yes 3 0.046226 63.473 By MS/MS 7 0 1 1 155560 155560 0 7660 2806 7936 19123 13512 13512 0 2779.8 0 KQDELKR PRAEEERRIAAEEKKKQDELKRIARELAED RIAAEEKKKQDELKRIARELAEDDSILK__ K K Q K R I 0 1 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 7 2 915.51378 P56385 P56385 50 56 ATP5I ATP synthase subunit e, mitochondrial yes yes 2;3 0.018621 188.81 By MS/MS 10 0 2 2 754980 754980 0 7661 1046 7937 19124;19125 13513;13514 13513 2 802470 0 KQDEPIDLFMIEIMEMK DVLTEAVVDSILAIKKQDEPIDLFMIEIME DEPIDLFMIEIMEMKHKSETDTSLIRGLVL K K Q M K H 0 0 0 2 0 1 3 0 0 3 1 2 3 1 1 0 0 0 0 0 0 0 17 1 2109.0196 P40227 P40227 181 197 CCT6A T-complex protein 1 subunit zeta yes yes 3 0.0073136 100.77 By MS/MS 6 0 1 1 3418800 3418800 0 7662 828 7938 19126 13515;13516 13516 572;573;574 2 26660 0 KQEEELTKR IERRKTGKEMLDYKRKQEEELTKRMLEERN MLDYKRKQEEELTKRMLEERNREKAEDRAA R K Q K R M 0 1 0 0 0 1 3 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 9 2 1159.6197 Q92575 Q92575 241 249 UBXN4 UBX domain-containing protein 4 yes yes 2;3 0.0023273 123.35 By MS/MS 5.67 0.471 1 2 3 3152900 3152900 0 7663 2062 7939 19127;19128;19129 13517;13518;13519 13518 3 34420 0 KQEEGAEIQCEAETGGTHKR SGLVPKKKQSVVQEKKQEEGAEIQCEAETG AEIQCEAETGGTHKRDFSEIKSQQCQGNEL K K Q K R D 2 1 0 0 1 2 5 3 1 1 0 2 0 0 0 0 2 0 0 0 0 0 20 2 2257.0393 Q9UNY4 Q9UNY4 195 214 TTF2 Transcription termination factor 2 yes yes 4 0.032283 53.504 By MS/MS 3 0 1 1 569330 569330 0 7664 2848 7940 19130 13520 13520 1 14862 0 KQEESVQK DQLKQQQLLNEENLRKQEESVQKQEAMRRA LNEENLRKQEESVQKQEAMRRATVEREMEL R K Q Q K Q 0 0 0 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 8 1 974.50327 Q5T9A4;Q9NVI7 Q9NVI7 206 213 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.007428 158.07 By MS/MS By matching 6 0 2 1 1 3481200 3462000 19153 7665 2655;1634 7941 19131;19132 13521 13521 1 26997 58742 KQEESVQKQEAMR DQLKQQQLLNEENLRKQEESVQKQEAMRRA LRKQEESVQKQEAMRRATVEREMELRHKNE R K Q M R R 1 1 0 0 0 3 3 0 0 0 0 2 1 0 0 1 0 0 0 1 0 0 13 2 1589.7832 Q5T9A4;Q9NVI7 Q9NVI7 206 218 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.0026018 109.95 By MS/MS 5.5 0.5 1 1 2 1918600 1918600 0 7666 2655;1634 7942 19133;19134 13522 13522 1 45220 0 KQEGTPEGLYL TNEDFKKSKENVLYKKQEGTPEGLYL____ VLYKKQEGTPEGLYL_______________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.002186 140.11 By MS/MS By matching 6 0 2 1 1 5981400 5936300 45155 7667 1116 7943 19135;19136 13523 13523 1 46291 138490 KQELLEALTK LKEACRAYGLKSGLKKQELLEALTKHFQD_ KSGLKKQELLEALTKHFQD___________ K K Q T K H 1 0 0 0 0 1 2 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 10 1 1171.6812 P12956 P12956 596 605 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.051971 108.9 By MS/MS 5 0 1 1 0 0 0 7668 569 7944 19137 13524 13524 1 0 0 KQENALKPK QAWQLRQQKLQEEQRKQENALKPKGASLKS LQEEQRKQENALKPKGASLKSPLPSQ____ R K Q P K G 1 0 1 0 0 1 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 0 9 2 1054.6135 Q86TS9 Q86TS9 104 112 MRPL52 39S ribosomal protein L52, mitochondrial yes yes 3 0.0014798 131.62 By MS/MS 10 0 1 1 0 0 0 7669 1815 7945 19138 13525 13525 1 0 0 KQEVQAWDGEVR TSAVEALLSADSASRKQEVQAWDGEVRQVS ASRKQEVQAWDGEVRQVSKHAFSLKQLDNP R K Q V R Q 1 1 0 1 0 2 2 1 0 0 0 1 0 0 0 0 0 1 0 2 0 0 12 1 1443.7106 P45974 P45974 163 174 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.011663 116.01 By MS/MS 4 0 1 1 389890 389890 0 7670 873 7946 19139 13526 13526 1 10643 0 KQIEAQQNK PKEADIVIKSTEGERKQIEAQQNKQQAISE STEGERKQIEAQQNKQQAISEKDRGNGFFK R K Q N K Q 1 0 1 0 0 3 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 9 1 1085.5829 Q9H6T3 Q9H6T3 271 279 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.0030671 146.79 By MS/MS 5 0 1 1 375370 375370 0 7671 2512 7947 19140 13527 13527 1 15429 0 KQIEEFNIGKR VPTSKRETYTEDFIKKQIEEFNIGKRHLAN DFIKKQIEEFNIGKRHLANMMGEDPETFTQ K K Q K R H 0 1 1 0 0 1 2 1 0 2 0 2 0 1 0 0 0 0 0 0 0 0 11 2 1360.7463 P82933 P82933 76 86 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 0.011952 110.93 By MS/MS 7 0 1 1 953130 953130 0 7672 1211 7948 19141 13528 13528 1 17033 0 KQKEMDEAATAEER KEFEKDKDDDEVFEKKQKEMDEAATAEERG KKQKEMDEAATAEERGRLKEELEEARDIAR K K Q E R G 3 1 0 1 0 1 4 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 14 2 1634.757 Q04637 Q04637 864 877 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.00018016 150.9 By MS/MS 2 0 1 1 217430 217430 0 7673 1264 7949 19142 13529 13529 1 10807 0 KQLLHLAEEK TVVIRGPSSDVEKAKKQLLHLAEEKQTKSF VEKAKKQLLHLAEEKQTKSFTVDIRAKPEY K K Q E K Q 1 0 0 0 0 1 2 0 1 0 3 2 0 0 0 0 0 0 0 0 0 0 10 1 1207.6925 Q00341 Q00341 714 723 HDLBP Vigilin yes yes 3 0.0057371 99.788 By MS/MS 3.5 0.5 1 1 2 683160 683160 0 7674 1231 7950 19143;19144 13530 13530 1 17930 0 KQLSSQGTVR HAYPDGRLAEPEKPRKQLSSQGTVRFFNSV PEKPRKQLSSQGTVRFFNSVRLWDFIENRE R K Q V R F 0 1 0 0 0 2 0 1 0 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1102.6095 Q9H000 Q9H000 362 371 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 2 0.002941 133.99 By MS/MS 7 0 1 1 1216800 1216800 0 7675 2446 7951 19145 13531 13531 1 21744 0 KQMVIDVLHPGK TIRTRKFMTNRLLQRKQMVIDVLHPGKATV LQRKQMVIDVLHPGKATVPKTEIREKLAKM R K Q G K A 0 0 0 1 0 1 0 1 1 1 1 2 1 0 1 0 0 0 0 2 0 0 12 1 1363.7646 P62847 P62847 21 32 RPS24 40S ribosomal protein S24 yes yes 3 0.0093157 104.59 By MS/MS 9.5 0.5 1 1 2 617000 617000 0 7676 1149 7952 19146;19147 13532 13532 898 1 488230 0 KQQISLATQMVR NDMKQQHVIETLIGKKQQISLATQMVRMIL IGKKQQISLATQMVRMILKIDDIRKPGESE K K Q V R M 1 1 0 0 0 3 0 0 0 1 1 1 1 0 0 1 1 0 0 1 0 0 12 1 1401.7762 P48643 P48643 514 525 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.001379 140.63 By MS/MS 6.25 0.433 3 1 4 9062600 9062600 0 7677 909 7953;7954 19148;19149;19150;19151 13533;13534;13535 13533 647 3 72216 0 KQSGGAGQYGK RETITAPVPFDFTHKKQSGGAGQYGKVIGV FTHKKQSGGAGQYGKVIGVLEPLDPEDYTK K K Q G K V 1 0 0 0 0 2 0 4 0 0 0 2 0 0 0 1 0 0 1 0 0 0 11 1 1079.536 Q96RP9 Q96RP9 541 551 GFM1 Elongation factor G, mitochondrial yes yes 2 0.019944 128.91 By MS/MS 5.5 0.5 1 1 2 763350 763350 0 7678 2247 7955 19152;19153 13536 13536 1 21775 0 KQTHNNAVVK EVKKRMRAEMELGLRKQTHNNAVVKMLPSF ELGLRKQTHNNAVVKMLPSFVRRTPDGTEN R K Q V K M 1 0 2 0 0 1 0 0 1 0 0 2 0 0 0 0 1 0 0 2 0 0 10 1 1137.6255 P19367 P19367 501 510 HK1 Hexokinase-1 yes yes 3 0.019798 83.883 By MS/MS 4 0 1 1 328170 328170 0 7679 630 7956 19154 13537 13537 1 8958.8 0 KQVEEIFNLK TPVKEDWNVRITKLRKQVEEIFNLKFAQAL ITKLRKQVEEIFNLKFAQALGLTEAVKVPY R K Q L K F 0 0 1 0 0 1 2 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1246.6921 P78347 P78347 573 582 GTF2I General transcription factor II-I yes yes 2 0.007221 117.7 By MS/MS 3 0 1 1 1870000 1870000 0 7680 1194 7957 19155 13538 13538 1 48818 0 KQVEELFER EFNFEKWNARITDLRKQVEELFERKYAQAI RITDLRKQVEELFERKYAQAIKAKGPVTIP R K Q E R K 0 1 0 0 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 1 1176.6139 P78347 P78347 363 371 GTF2I General transcription factor II-I yes yes 2 0.043731 101.97 By MS/MS 3 0 1 1 870440 870440 0 7681 1194 7958 19156 13539 13539 1 22723 0 KQVFTSEK EAKLSSFWQLIVDEKKQVFTSEKFLVMASE QLIVDEKKQVFTSEKFLVMASEDALCTVLH K K Q E K F 0 0 0 0 0 1 1 0 0 0 0 2 0 1 0 1 1 0 0 1 0 0 8 1 965.5182 Q92616 Q92616 522 529 GCN1L1 Translational activator GCN1 yes yes 2 0.034679 122.19 By MS/MS 2 0 1 1 469510 469510 0 7682 2068 7959 19157 13540 13540 1 23337 0 KQWDSVVLER HTIELEPNRQFTLAKKQWDSVVLERIEQAC FTLAKKQWDSVVLERIEQACDPAWSADVAA K K Q E R I 0 1 0 1 0 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 0 0 10 1 1258.667 Q9BRX2 Q9BRX2 115 124 PELO Protein pelota homolog yes yes 2 0.0095877 115.7 By MS/MS 7 0 1 1 2130300 2130300 0 7683 2331 7960 19158 13541 13541 1 38068 0 KQYDTYGEEGLK DLGAAYEVLSDSEKRKQYDTYGEEGLKDGH EKRKQYDTYGEEGLKDGHQSSHGDIFSHFF R K Q L K D 0 0 0 1 0 1 2 2 0 0 1 2 0 0 0 0 1 0 2 0 0 0 12 1 1429.6725 Q9UBS4 Q9UBS4 84 95 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.00010163 141.08 By MS/MS 7 0 1 1 951450 951450 0 7684 2756 7961 19159 13542 13542 0 17003 0 KREEFIQK PENGVELSKEELIRRKREEFIQKHGRGMEK KEELIRRKREEFIQKHGRGMEKSNKSTKSD R K R Q K H 0 1 0 0 0 1 2 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 8 2 1076.5978 P08240 P08240 213 220 SRPR Signal recognition particle receptor subunit alpha yes yes 3 0.050722 82.279 By MS/MS 5 0 1 1 755700 755700 0 7685 502 7962 19160 13543 13543 1 31062 0 KREENLK EYEKLQVLLRDIVKRKREENLKMVWRINPA LLRDIVKRKREENLKMVWRINPAHRKLQAR R K R L K M 0 1 1 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 7 2 915.51378 Q14204 Q14204 441 447 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.047619 143.61 By MS/MS 1 0 1 1 0 0 0 7686 1421 7963 19161 13544 13544 1 0 0 KRFDTEEEFK SPPIGDLQVFYKESKKRFDTEEEFKKRAYQ YKESKKRFDTEEEFKKRAYQCVVLLQGKNP K K R F K K 0 1 0 1 0 0 3 0 0 0 0 2 0 2 0 0 1 0 0 0 0 0 10 2 1327.6408 P54136 P54136 278 287 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.0033714 101.38 By MS/MS 5 0 1 1 1820500 1820500 0 7687 1013 7964 19162 13545 13545 1 74830 0 KRNVESGEEELASK PNWDRREPLSLINVRKRNVESGEEELASKL RKRNVESGEEELASKLDHYKAKATRHIFLI R K R S K L 1 1 1 0 0 0 4 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 14 2 1574.79 Q96HS1 Q96HS1 75 88 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 0.0049729 92.65 By MS/MS 8.5 0.5 1 1 2 1015500 1015500 0 7688 2196 7965 19163;19164 13546 13546 1 96832 0 KRPETVATQFK PIMSQCFDRSELSDKKRPETVATQFKMSLL LSDKKRPETVATQFKMSLLQLVEILQSKEP K K R F K M 1 1 0 0 0 1 1 0 0 0 0 2 0 1 1 0 2 0 0 1 0 0 11 2 1303.7248 O00159 O00159 595 605 MYO1C Unconventional myosin-Ic yes yes 3 0.045763 64.224 By MS/MS 4 0 1 1 1811200 1811200 0 7689 72 7966 19165 13547 13547 1 49444 0 KRQEAVAGR TYDGVFIWKISDFARKRQEAVAGRIPAIFS ISDFARKRQEAVAGRIPAIFSPAFYTSRYG R K R G R I 2 2 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 9 2 1013.573 Q12933 Q12933 364 372 TRAF2 TNF receptor-associated factor 2 yes yes 2 0.032445 125.16 By MS/MS 7 0 1 1 0 0 0 7690 1317 7967 19166 13548 13548 1 0 0 KRTEFAGDK VLGQTGPYRRPQRLRKRTEFAGDKFKEEKV RPQRLRKRTEFAGDKFKEEKVFEPNEEALG R K R D K F 1 1 0 1 0 0 1 1 0 0 0 2 0 1 0 0 1 0 0 0 0 0 9 2 1050.5458 O43615 O43615 209 217 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.013376 133.99 By MS/MS 6.5 1.12 1 1 1 1 4 1388400 1388400 0 7691 209 7968 19167;19168;19169;19170 13549 13549 1 28322 0 KRVPDHHPC EVILRVDNIIKAAPRKRVPDHHPC______ IKAAPRKRVPDHHPC_______________ R K R P C - 0 1 0 1 1 0 0 0 2 0 0 1 0 0 2 0 0 0 0 1 0 0 9 2 1144.556 P78371 P78371 527 535 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.001319 166.78 By MS/MS 5.5 1.12 2 2 2 2 8 45395000 45395000 0 7692 1195 7969 19171;19172;19173;19174;19175;19176;19177;19178 13550;13551 13551 2 360620 0 KSDGIYIINLK GTNLDFQMEQYIYKRKSDGIYIINLKRTWE IYKRKSDGIYIINLKRTWEKLLLAARAIVA R K S L K R 0 0 1 1 0 0 0 1 0 3 1 2 0 0 0 1 0 0 1 0 0 0 11 1 1262.7234 P08865 P08865 42 52 RPSA 40S ribosomal protein SA yes yes 2 0.00011958 172.27 By MS/MS 7 0 1 1 2728800 2728800 0 7693 509 7970 19179 13552 13552 1 48763 0 KSDIDEIVLVGGSTR TMKPVQKVLEDSDLKKSDIDEIVLVGGSTR KSDIDEIVLVGGSTRIPKIQQLVKEFFNGK K K S T R I 0 1 0 2 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 2 0 0 15 1 1587.8468 P11021 P11021 353 367 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.00049092 160.46 By MS/MS 5 0.707 1 2 1 4 14776000 14776000 0 7694 545 7971 19180;19181;19182;19183 13553;13554 13554 2 556430 0 KSDPVVSYR CLKDLEEDHACIPIKKSDPVVSYRETVSEE ACIPIKKSDPVVSYRETVSEESNVLCLSKS K K S Y R E 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 2 0 0 1 2 0 0 9 1 1049.5506 P13639 P13639 572 580 EEF2 Elongation factor 2 yes yes 2 0.031311 108.98 By MS/MS 4.5 0.5 1 1 2 1553200 1553200 0 7695 576 7972 19184;19185 13555 13555 1 44767 0 KSDVEAIFSK NSRVFIGNLNTLVVKKSDVEAIFSKYGKIV TLVVKKSDVEAIFSKYGKIVGCSVHKGFAF K K S S K Y 1 0 0 1 0 0 1 0 0 1 0 2 0 1 0 2 0 0 0 1 0 0 10 1 1122.5921 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 30 39 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 0.0040569 120.63 By MS/MS 7 0 1 1 5866500 5866500 0 7696 495 7973 19186 13556 13556 1 104840 0 KSEEEIDFLR YQFQSFSQYRCKTAKKSEEEIDFLRSNPKI CKTAKKSEEEIDFLRSNPKIWNVHSVLNVL K K S L R S 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 1 1264.6299 Q9Y262 Q9Y262 207 216 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 0.0017682 110.08 By MS/MS 5 0 1 1 1632200 1632200 0 7697 2868 7974 19187 13557 13557 1 67090 0 KSEHLSVRPQTALEENETQK VGEARTQHGGSHVSRKSEHLSVRPQTALEE SVRPQTALEENETQKEVPQDQHLEAPADQS R K S Q K E 1 1 1 0 0 2 4 0 1 0 2 2 0 0 1 2 2 0 0 1 0 0 20 2 2323.1768 Q9Y3D9 Q9Y3D9 150 169 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 3 0.0043401 78.794 By MS/MS 9 0 1 1 699310 699310 0 7698 2935 7975 19188 13558 13558 1 401340 0 KSHHANSPTAGAAK IPPPDPGEQIFNLPKKSHHANSPTAGAAKS KKSHHANSPTAGAAKSSPAAKPGSTPSRPS K K S A K S 4 0 1 0 0 0 0 1 2 0 0 2 0 0 1 2 1 0 0 0 0 0 14 1 1375.6957 Q15555 Q15555 194 207 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2;3 7.3416E-05 145.61 By MS/MS 7.8 0.748 2 2 1 5 1409200 1409200 0 7699 1508 7976 19189;19190;19191;19192;19193 13559;13560 13559 2 34736 0 KSIIKEPESAAEAVK KCHHFFVVLSEADSKKSIIKEPESAAEAVK KSIIKEPESAAEAVKLAFQQKPPPPPKKIY K K S V K L 3 0 0 0 0 0 3 0 0 2 0 3 0 0 1 2 0 0 0 1 0 0 15 2 1598.8879 O76031 O76031 144 158 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 3 0.035866 65.467 By MS/MS 5.5 0.5 1 1 2 2948800 2948800 0 7700 344 7977 19194;19195 13561 13561 1 60588 0 KSLNSIEFR SLVFSRDFGLLVFVRKSLNSIEFRECREEI LLVFVRKSLNSIEFRECREEILKFLCIFLE R K S F R E 0 1 1 0 0 0 1 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 9 1 1092.5928 P78527 P78527 71 79 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0071285 131.52 By MS/MS 1 0 1 1 325370 325370 0 7701 1197 7978 19196 13562 13562 1 15897 0 KSNFSLEDFQHSK DNPSQLIWTSSRSARKSNFSLEDFQHSKGK ARKSNFSLEDFQHSKGKEPYSSSKYATDLL R K S S K G 0 0 1 1 0 1 1 0 1 0 1 2 0 2 0 3 0 0 0 0 0 0 13 1 1565.7474 P56937 P56937 176 188 HSD17B7 3-keto-steroid reductase yes yes 3 5.8354E-05 155.39 By MS/MS 8 0 1 1 1547000 1547000 0 7702 1050 7979 19197 13563 13563 1 102060 0 KSPYLPSAHR FIPWGPASIQVALSRKSPYLPSAHRVSGLM VALSRKSPYLPSAHRVSGLMMANHTSISSL R K S H R V 1 1 0 0 0 0 0 0 1 0 1 1 0 0 2 2 0 0 1 0 0 0 10 1 1154.6196 P23258;Q9NRH3 P23258 363 372 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 3 0.02071 91.469 By MS/MS 7 0 1 1 0 0 0 7703 666 7980 19198 13564 13564 1 0 0 KSSTPEEVKK VSDGVIKVFNDMKVRKSSTPEEVKKRKKAV DMKVRKSSTPEEVKKRKKAVLFCLSEDKKN R K S K K R 0 0 0 0 0 0 2 0 0 0 0 3 0 0 1 2 1 0 0 1 0 0 10 2 1131.6136 P23528 P23528 22 31 CFL1 Cofilin-1 yes yes 3 0.015959 90.05 By MS/MS 10 0 1 1 55244 55244 0 7704 671 7981 19199 13565 13565 1 58719 0 KSTVLQQQYNR GDEESTMLEDSVSPKKSTVLQQQYNRVGKV VSPKKSTVLQQQYNRVGKVEHGSVALPAIM K K S N R V 0 1 1 0 0 3 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 11 1 1363.7208 Q9Y490 Q9Y490 428 438 TLN1 Talin-1 yes yes 2;3 4.7829E-10 200.71 By MS/MS 2.5 0.5 2 2 4 729940 729940 0 7705 2947 7982 19200;19201;19202;19203 13566;13567 13567 2 31748 0 KTAEAGGVTGK DGFSELRWDDQQKVKKTAEAGGVTGKGQDG QKVKKTAEAGGVTGKGQDGIGSKAEKTLGD K K T G K G 2 0 0 0 0 0 1 3 0 0 0 2 0 0 0 0 2 0 0 1 0 0 11 1 1017.5455 P09874 P09874 87 97 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.010681 117.14 By MS/MS 2.5 1.12 1 1 1 1 4 3151700 3151700 0 7706 521 7983 19204;19205;19206;19207 13568 13568 1 87559 0 KTATAVAHCK PSKGPLQSVQVFGRKKTATAVAHCKRGNGL VFGRKKTATAVAHCKRGNGLIKVNGRPLEM K K T C K R 3 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 2 0 0 1 0 0 10 1 1085.5652 P62249 P62249 17 26 RPS16 40S ribosomal protein S16 yes yes 2;3 0.0076742 114.4 By MS/MS 10 0 2 2 174030 174030 0 7707 1120 7984 19208;19209 13569;13570 13569 2 184980 0 KTDFSWEEER TQLLSLYVLFHCLAKKTDFSWEEERNFGAS HCLAKKTDFSWEEERNFGASLLLPGLKQKN K K T E R N 0 1 0 1 0 0 3 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 10 1 1325.5888 Q92552 Q92552 193 202 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0017044 147.3 By MS/MS 7 0 1 1 1955700 1955700 0 7708 2059 7985 19210 13571 13571 1 34949 0 KTEAAATTR NIKHQPGGGRAKVEKKTEAAATTRKPESNA RAKVEKKTEAAATTRKPESNAVTKTAGPIA K K T T R K 3 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 9 1 947.50361 P27816 P27816 959 967 MAP4 Microtubule-associated protein 4 yes yes 2 0.03503 106.88 By MS/MS 2.5 0.5 1 1 2 103580 103580 0 7709 710 7986 19211;19212 13572 13572 1 4739.8 0 KTEITDK GQDILSMMGQLMKPKKTEITDKLRGEINKV MGQLMKPKKTEITDKLRGEINKVVNKYIDQ K K T D K L 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 0 2 0 0 0 0 0 7 1 833.44945 Q9Y265 Q9Y265 268 274 RUVBL1 RuvB-like 1 yes yes 2 0.048092 147.29 By MS/MS 6 0 1 1 10233000 10233000 0 7710 2870 7987 19213 13573 13573 1 79796 0 KTEVLMENFR FCPMVGSEVYSTEIKKTEVLMENFRRAIGL STEIKKTEVLMENFRRAIGLRIKETKEVYE K K T F R R 0 1 1 0 0 0 2 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 10 1 1265.6438 Q9Y265 Q9Y265 108 117 RUVBL1 RuvB-like 1 yes yes 2 0.047078 97.813 By MS/MS 5.5 0.5 1 1 2 7368900 7368900 0 7711 2870 7988 19214;19215 13574 13574 1 66321 0 KTFPTVNPSTGEVICQVAEGDKEDVDK NQIFINNEWHDAVSRKTFPTVNPSTGEVIC VICQVAEGDKEDVDKAVKAARAAFQLGSPW R K T D K A 1 0 1 3 1 1 3 2 0 1 0 3 0 1 2 1 3 0 0 4 0 0 27 2 2962.423 P05091 P05091 52 78 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 3 0.010692 51.119 By MS/MS 6 0 1 1 3324800 3324800 0 7712 467 7989 19216 13575 13575 1 25927 0 KTFSYAGFEMQPK GALEDSQLVAGVAFKKTFSYAGFEMQPKKY FKKTFSYAGFEMQPKKYHNPKIALLNVELE K K T P K K 1 0 0 0 0 1 1 1 0 0 0 2 1 2 1 1 1 0 1 0 0 0 13 1 1532.7334 Q99832 Q99832 218 230 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.0016588 136.93 By MS/MS 6.2 0.4 4 1 5 16560000 16560000 0 7713 2295 7990;7991 19217;19218;19219;19220;19221 13576;13577;13578;13579 13576 1440 4 131600 0 KTGCNVLLIQK REERAYILNLVKQIKKTGCNVLLIQKSILR KQIKKTGCNVLLIQKSILRDALSDLALHFL K K T Q K S 0 0 1 0 1 1 0 1 0 1 2 2 0 0 0 0 1 0 0 1 0 0 11 1 1272.7224 P50991 P50991 292 302 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.00014375 171.33 By MS/MS 6 0 2 2 82327000 82327000 0 7714 956 7992 19222;19223 13580;13581 13580 2 641990 0 KTSYAQHQQVR LFCVGFTKKRNNQIRKTSYAQHQQVRQIRK NQIRKTSYAQHQQVRQIRKKMMEIMTREVQ R K T V R Q 1 1 0 0 0 3 0 0 1 0 0 1 0 0 0 1 1 0 1 1 0 0 11 1 1344.6898 P61247 P61247 152 162 RPS3A 40S ribosomal protein S3a yes yes 2;3 2.452E-07 180.09 By MS/MS By matching 8 0 3 2 1 2339000 2321800 17211 7715 1094 7993 19224;19225;19226 13582;13583 13583 2 153170 146830 KTTVLDVMR GYTPLTTDQSVASVRKTTVLDVMRRLLQPK SVASVRKTTVLDVMRRLLQPKNVMVSTGRD R K T M R R 0 1 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 0 2 0 0 9 1 1061.5903 P23258;Q9NRH3 P23258 287 295 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 0.020633 111.74 By MS/MS 7 0 1 1 416530 416530 0 7716 666 7994 19227 13584 13584 448 1 7443.6 0 KVAEPELMGTPDGTCYPPPPVPR DPGLPAEEPKEKSSRKVAEPELMGTPDGTC GTPDGTCYPPPPVPRQASPQNLGTPGLLHP R K V P R Q 1 1 0 1 1 0 2 2 0 0 1 1 1 0 7 0 2 0 1 2 0 0 23 1 2507.2189 P27708 P27708 1875 1897 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 3 0.0005907 85.932 By MS/MS 1.5 0.5 1 1 2 462350 462350 0 7717 709 7995 19228;19229 13585;13586 13585 479 2 22815 0 KVCGDSDKGFVVINQK KFIEDRVKKIIELKRKVCGDSDKGFVVINQ VCGDSDKGFVVINQKGIDPFSLDALSKEGI R K V Q K G 0 0 1 2 1 1 0 2 0 1 0 3 0 1 0 1 0 0 0 3 0 0 16 2 1792.9142 P40227 P40227 280 295 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 9.017E-07 195.72 By MS/MS 6.2 0.748 1 2 2 5 59296000 59296000 0 7718 828 7996 19230;19231;19232;19233;19234 13587;13588;13589 13588 3 536870 0 KVDEAIALFQK EADEAKLQQTEAELRKVDEAIALFQKML__ AELRKVDEAIALFQKML_____________ R K V Q K M 2 0 0 1 0 1 1 0 0 1 1 2 0 1 0 0 0 0 0 1 0 0 11 1 1260.7078 P26640 P26640 1252 1262 VARS Valine--tRNA ligase yes yes 2;3 0.00048588 157.97 By MS/MS 3.33 0.471 2 1 3 4414500 4414500 0 7719 699 7997 19235;19236;19237 13590;13591 13590 2 115430 0 KVDWLTEK TLTITQAVIFINTRRKVDWLTEKMHARDFT IFINTRRKVDWLTEKMHARDFTVSAMHGDM R K V E K M 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 8 1 1017.5495 P60842;Q14240;P38919 P60842 284 291 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 2.7921E-05 211.48 By MS/MS By matching 6 2.42 1 1 1 1 3 2 1 1 1 11 1 862230000 862130000 96362 7720 1074;821 7998 19238;19239;19240;19241;19242;19243;19244;19245;19246;19247;19248;19249 13592;13593;13594;13595;13596;13597;13598 13596 7 11275000 295530 KVEEAEPEEFVVEK TTLQKMGKKQNGKSKKVEEAEPEEFVVEKV KKVEEAEPEEFVVEKVLDRRVVNGKVEYFL K K V E K V 1 0 0 0 0 0 6 0 0 0 0 2 0 1 1 0 0 0 0 3 0 0 14 1 1660.8196 Q13185 Q13185 21 34 CBX3 Chromobox protein homolog 3 yes yes 2 5.0497E-25 276.12 By MS/MS 9 0 1 1 2072800 2072800 0 7721 1344 7999 19250 13599 13599 1 1189600 0 KVEEEEDESALKR SEYCRISNLIVLHLRKVEEEEDESALKRSE LRKVEEEEDESALKRSELVNWYLKEIESEI R K V K R S 1 1 0 1 0 0 5 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 13 2 1560.7631 Q14566 Q14566 733 745 MCM6 DNA replication licensing factor MCM6 yes yes 3 0.00018292 162.67 By MS/MS 4 0 1 1 802100 802100 0 7722 1436 8000 19251 13600 13600 1 21896 0 KVEEEEKLLK ASLSKSVGVSNRQNKKVEEEEKLLKLFQGV NRQNKKVEEEEKLLKLFQGVNKAQDGFTQW K K V L K L 0 0 0 0 0 0 4 0 0 0 2 3 0 0 0 0 0 0 0 1 0 0 10 2 1243.7024 Q6Y7W6 Q6Y7W6 1114 1123 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 0.00043896 139.43 By MS/MS 3 0 1 1 728990 728990 0 7723 1736 8001 19252 13601 13601 1 19030 0 KVEEVVYDLSIR DSLRKRYDGLKYDVKKVEEVVYDLSIRGFN DVKKVEEVVYDLSIRGFNKETAAACVEK__ K K V I R G 0 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 1 3 0 0 12 1 1448.7875 Q15631 Q15631 204 215 TSN Translin yes yes 2 0.018863 106.79 By MS/MS 8.5 0.5 1 1 2 580350 580350 0 7724 1510 8002 19253;19254 13602 13602 1 211090 0 KVEITTETIK DPKNVLITDFFGSVRKVEITTETIKLQQDS FGSVRKVEITTETIKLQQDSEIMESSYKED R K V I K L 0 0 0 0 0 0 2 0 0 2 0 2 0 0 0 0 3 0 0 1 0 0 10 1 1160.6653 Q92643 Q92643 309 318 PIGK GPI-anchor transamidase yes yes 2 2.8925E-10 208.63 By MS/MS 7 0 1 1 5291900 5291900 0 7725 2072 8003 19255 13603 13603 1 94567 0 KVEKLEQQCQK NHIQELQIMDERIQRKVEKLEQQCQKEAKE RIQRKVEKLEQQCQKEAKEFAKKVQELQKS R K V Q K E 0 0 0 0 1 3 2 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 11 2 1416.7395 O00471 O00471 63 73 EXOC5 Exocyst complex component 5 yes yes 3 0.0012309 141.71 By MS/MS 5 0 1 1 337090 337090 0 7726 98 8004 19256 13604 13604 1 13856 0 KVEPVTQK NGKEISPGSGPGEIRKVEPVTQKDSTSLSS SGPGEIRKVEPVTQKDSTSLSSESSSSSSE R K V Q K D 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 1 0 0 2 0 0 8 1 927.53893 O43491 O43491 725 732 EPB41L2 Band 4.1-like protein 2 yes yes 2 0.013 147.29 By MS/MS 3 0 1 1 200340 200340 0 7727 204 8005 19257 13605 13605 1 5229.9 0 KVESTGAVPEFKEEK QPDFFLDEYPEAVSKKVESTGAVPEFKEEK KVESTGAVPEFKEEKLQLQPKPRSGAVEET K K V E K L 1 0 0 0 0 0 4 1 0 0 0 3 0 1 1 1 1 0 0 2 0 0 15 2 1676.8621 Q6YN16 Q6YN16 284 298 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 3 0.0058734 96.435 By MS/MS 6.5 0.5 1 1 2 6632100 6632100 0 7728 1738 8006 19258;19259 13606 13606 1 81826 0 KVETDHIVAAVGLEPNVELAK GVSSGKLLIKLKDGRKVETDHIVAAVGLEP IVAAVGLEPNVELAKTGGLEIDSDFGGFRV R K V A K T 3 0 1 1 0 0 3 1 1 1 2 2 0 0 1 0 1 0 0 4 0 0 21 1 2231.2161 O95831 O95831 388 408 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3;4 0.00081582 89.756 By MS/MS 5.5 0.5 2 2 4 23416000 23416000 0 7729 409 8007 19260;19261;19262;19263 13607;13608;13609;13610 13609 4 329900 0 KVFANPEDCVAFGK MMLMSTATAFYRLTRKVFANPEDCVAFGKG RKVFANPEDCVAFGKGENAKKYLRTDDRVE R K V G K G 2 0 1 1 1 0 1 1 0 0 0 2 0 2 1 0 0 0 0 2 0 0 14 1 1580.7657 P10620 P10620 42 55 MGST1 Microsomal glutathione S-transferase 1 yes yes 2 0.043275 92.792 By MS/MS 10 0 1 1 320970 320970 0 7730 541 8008 19264 13611 13611 1 341160 0 KVFDPVPVGVTK QILPLHSQIPREEQRKVFDPVPVGVTKVIL EQRKVFDPVPVGVTKVILSTNIAETSITIN R K V T K V 0 0 0 1 0 0 0 1 0 0 0 2 0 1 2 0 1 0 0 4 0 0 12 1 1284.7442 Q08211 Q08211 697 708 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00032547 158.56 By MS/MS 3.5 0.5 1 1 2 2469400 2469400 0 7731 1287 8009 19265;19266 13612 13612 1 64678 0 KVGNPFELDTQQGPQVDKEQFER YNEFLERTVEKAKQRKVGNPFELDTQQGPQ DTQQGPQVDKEQFERVLGYIQLGQKEGAKL R K V E R V 0 1 1 2 0 4 3 2 0 0 1 2 0 2 2 0 1 0 0 2 0 0 23 2 2688.3144 P30837 P30837 347 369 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 3 9.8524E-05 95.209 By MS/MS 6 0 1 1 6019700 6019700 0 7732 747 8010 19267 13613 13613 1 46942 0 KVGTFFSEVKPAGPTVEQQGEMAR PKVSGHVITDIVEGKKVGTFFSEVKPAGPT KPAGPTVEQQGEMARSGGRMLATLEPEQRA K K V A R S 2 1 0 0 0 2 3 3 0 0 0 2 1 2 2 1 2 0 0 3 0 0 24 2 2592.3006 P54886 P54886 348 371 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 4 0.015087 49.577 By MS/MS 5 0 1 1 3271000 3271000 0 7733 1019 8011 19268 13614 13614 790 1 134450 0 KVHPAVVIR MVMATVKKGKPELRKKVHPAVVIRQRKSYR KPELRKKVHPAVVIRQRKSYRRKDGVFLYF K K V I R Q 1 1 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 3 0 0 9 1 1017.6447 P62829 P62829 75 83 RPL23 60S ribosomal protein L23 yes yes 3 0.009841 109.71 By MS/MS 10 0 1 1 961140 961140 0 7734 1147 8012 19269 13615 13615 1 1021600 0 KVIEEQLEPAVEK KVIEPQYFGLAYLFRKVIEEQLEPAVEKIS FRKVIEEQLEPAVEKISIMAERLANQFAIY R K V E K I 1 0 0 0 0 1 4 0 0 1 1 2 0 0 1 0 0 0 0 2 0 0 13 1 1510.8243 P42704 P42704 1224 1236 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 3.7195E-58 294.49 By MS/MS 4.62 1.32 2 2 2 1 1 8 30560000 30560000 0 7735 854 8013 19270;19271;19272;19273;19274;19275;19276;19277 13616;13617 13616 2 796660 0 KVLADLAIYEPK ALIGNLVKCQVELNRKVLADLAIYEPKTFK LNRKVLADLAIYEPKTFKSLAALASRRRHE R K V P K T 2 0 0 1 0 0 1 0 0 1 2 2 0 0 1 0 0 0 1 1 0 0 12 1 1358.781 Q9BYC9 Q9BYC9 100 111 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 0.039624 96.745 By MS/MS 9 0 1 1 270470 270470 0 7736 2411 8014 19278 13618 13618 1 155230 0 KVLISDSLDPCCR ______________________________ LRKVLISDSLDPCCRKILQDGGLQVVEKQN R K V C R K 0 1 0 2 2 0 0 0 0 1 2 1 0 0 1 2 0 0 0 1 0 0 13 1 1561.7592 O43175 O43175 8 20 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 0.0017144 138.24 By MS/MS 6 0 2 2 6573300 6573300 0 7737 185 8015 19279;19280 13619;13620 13619 1 51259 0 KVLTGVAGEDAECHAAK LSDTKYLEMIYSMCKKVLTGVAGEDAECHA LTGVAGEDAECHAAKLLEVIILQCKGRGID K K V A K L 4 0 0 1 1 0 2 2 1 0 1 2 0 0 0 0 1 0 0 2 0 0 17 1 1754.8621 O95373 O95373 724 740 IPO7 Importin-7 yes yes 3 0.0061858 92.096 By MS/MS 4 0 1 1 506080 506080 0 7738 388 8016 19281 13621 13621 1 13815 0 KVPQVSTPTLVEVSR GEYGFQNALIVRYTRKVPQVSTPTLVEVSR KVPQVSTPTLVEVSRSLGKVGTRCCTKPES R K V S R S 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 CON__P02768-1;P02768;CON__P02769 CON__P02769 437 451 ALB Serum albumin no no 2;3 0.0020752 122.52 By MS/MS 7 2.16 1 1 1 3 4316400 4316400 0 + 7739 43;42 8017 19282;19283;19284 13622;13623 13622 2 496260 0 KVQGGALEDSQLVAGVAFK MMLDDLLQLKMIGIKKVQGGALEDSQLVAG GALEDSQLVAGVAFKKTFSYAGFEMQPKKY K K V F K K 3 0 0 1 0 2 1 3 0 0 2 2 0 1 0 1 0 0 0 3 0 0 19 1 1916.0367 Q99832 Q99832 199 217 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.00044891 162.7 By MS/MS 6 0 2 2 92270000 92270000 0 7740 2295 8018 19285;19286 13624;13625 13625 2 719530 0 KVQGGALEDSQLVAGVAFKK MMLDDLLQLKMIGIKKVQGGALEDSQLVAG ALEDSQLVAGVAFKKTFSYAGFEMQPKKYH K K V K K T 3 0 0 1 0 2 1 3 0 0 2 3 0 1 0 1 0 0 0 3 0 0 20 2 2044.1317 Q99832 Q99832 199 218 CCT7 T-complex protein 1 subunit eta yes yes 3;4 0.0028529 81.357 By MS/MS 6 0 2 2 23777000 23777000 0 7741 2295 8019 19287;19288 13626;13627 13627 2 185410 0 KVQSGNINAAK PVLVLSQNTKRESGRKVQSGNINAAKTIAD ESGRKVQSGNINAAKTIADIIRTCLGPKSM R K V A K T 2 0 2 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 11 1 1128.6251 P49368 P49368 21 31 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 2.6604E-15 228.2 By MS/MS By matching 5.71 2.46 1 1 1 1 1 4 2 1 1 1 13 1 124950000 124940000 15745 7742 916 8020 19289;19290;19291;19292;19293;19294;19295;19296;19297;19298;19299;19300;19301;19302 13628;13629;13630;13631;13632;13633 13629 6 1888600 48290 KVQTESSTGSVGSNR NLVQVGDSLRASTIRKVQTESSTGSVGSNR KVQTESSTGSVGSNRVRTTLTLCVEAIDFD R K V N R V 0 1 1 0 0 1 1 2 0 0 0 1 0 0 0 4 2 0 0 2 0 0 15 1 1535.754 Q9BRX2 Q9BRX2 46 60 PELO Protein pelota homolog yes yes 2 2.3411E-62 295.29 By MS/MS 7 0 1 1 1386300 1386300 0 7743 2331 8021 19303 13634 13634 1 24773 0 KVSHVADTK NADPQAVTMPATETKKVSHVADTKVNTKAQ PATETKKVSHVADTKVNTKAQETEAAPSQA K K V T K V 1 0 0 1 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 2 0 0 9 1 983.53999 Q9UNF1 Q9UNF1 125 133 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.0027002 148.91 By MS/MS 6 0.816 1 1 1 3 582470 582470 0 7744 2840 8022 19304;19305;19306 13635 13635 1 20257 0 KVTEDLSK AESTENSPTPSPLQKKVTEDLSKTLLMYTV TPSPLQKKVTEDLSKTLLMYTVPAVQGFFR K K V S K T 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 1 1 0 0 1 0 0 8 1 918.50221 P42345 P42345 1868 1875 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.031061 137.9 By MS/MS 3 0.816 1 1 1 3 711450 711450 0 7745 849 8023 19307;19308;19309 13636 13636 1 26142 0 KVTEELLTDNR TLNFKMGNRHKFTGKKVTEELLTDNRYLLL FTGKKVTEELLTDNRYLLLVLMDAERAWSY K K V N R Y 0 1 1 1 0 0 2 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 11 1 1316.6936 Q9UHB9 Q9UHB9 112 122 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.038817 115.29 By MS/MS 5 0 1 1 773100 773100 0 7746 2779 8024 19310 13637 13637 1 31777 0 KVTLSTDK IKSLEKYIIEELNVRKVTLSTDKNKYGIRL IEELNVRKVTLSTDKNKYGIRLRAEPDHMV R K V D K N 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 1 2 0 0 1 0 0 8 1 890.5073 P41252 P41252 878 885 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.029355 127.46 By MS/MS 3 0 1 1 1708100 1708100 0 7747 840 8025 19311 13638 13638 1 44591 0 KVTLSTDKNK IKSLEKYIIEELNVRKVTLSTDKNKYGIRL ELNVRKVTLSTDKNKYGIRLRAEPDHMVLG R K V N K Y 0 0 1 1 0 0 0 0 0 0 1 3 0 0 0 1 2 0 0 1 0 0 10 2 1132.6452 P41252 P41252 878 887 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2;3 0.0041418 117.31 By MS/MS By matching 3.25 0.433 3 1 3 1 1667700 1658600 9041.7 7748 840 8026 19312;19313;19314;19315 13639;13640 13639 2 43419 12959 KVVDFLLK GSAEKEPEQPPALWRKVVDFLLKAIMRTMW QPPALWRKVVDFLLKAIMRTMWFAGGFHRV R K V L K A 0 0 0 1 0 0 0 0 0 0 2 2 0 1 0 0 0 0 0 2 0 0 8 1 960.6008 Q8NF37 Q8NF37 93 100 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.015208 156.75 By MS/MS 6 0 1 1 2728200 2728200 0 7749 1967 8027 19316 13641 13641 1 21274 0 KVVDNTTAK VNKLLVGNKSDLTTKKVVDNTTAKEFADSL SDLTTKKVVDNTTAKEFADSLGIPFLETSA K K V A K E 1 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 2 0 0 9 1 974.53966 Q9H0U4;Q92928 Q9H0U4 129 137 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 2 0.0024671 150.27 By MS/MS 9 0 1 1 609630 609630 0 7750 2459 8028 19317 13642 13642 1 349870 0 KVVDYTTAK VNKLLVGNKCDLTTKKVVDYTTAKEFADSL CDLTTKKVVDYTTAKEFADSLGIPFLETSA K K V A K E 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 2 0 1 2 0 0 9 1 1023.5601 P62820 P62820 132 140 RAB1A Ras-related protein Rab-1A yes yes 2 0.030493 109.44 By MS/MS 9 0 1 1 230360 230360 0 7751 1145 8029 19318 13643 13643 1 132210 0 KVVEDIEYLK CEVLQYSAREAQDSKKVVEDIEYLKFDKGP AQDSKKVVEDIEYLKFDKGPWLKQDNRTLY K K V L K F 0 0 0 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 1 2 0 0 10 1 1234.6809 O95299 O95299 268 277 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.0022097 164.66 By MS/MS 7.5 0.5 1 1 2 3923800 3923800 0 7752 384 8030 19319;19320 13644 13644 1 153260 0 KVVENEIYSESHR GVFSMGNNSYGQCGRKVVENEIYSESHRVH GRKVVENEIYSESHRVHRMQDFDGQVVQVA R K V H R V 0 1 1 0 0 0 3 0 1 1 0 1 0 0 0 2 0 0 1 2 0 0 13 1 1588.7845 Q96I51 Q96I51 209 221 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 3 0.0030032 104.81 By MS/MS 7 0 1 1 4149500 4149500 0 7753 2199 8031 19321 13645 13645 1 74152 0 KVVGCSCVVVK EWVGLCKIDREGKPRKVVGCSCVVVKDYGK GKPRKVVGCSCVVVKDYGKESQAKDVIEEY R K V V K D 0 0 0 0 2 0 0 1 0 0 0 2 0 0 0 1 0 0 0 5 0 0 11 1 1233.6573 P25398 P25398 102 112 RPS12 40S ribosomal protein S12 yes yes 2;3 0.0039073 117.25 By MS/MS By matching 10 0 4 2 2 1885100 1836200 48819 7754 684 8032 19322;19323;19324;19325 13646;13647 13647 2 1951700 1252200 KVVGDVAYDEAKER CGINYVPDDKKPNGRKVVGDVAYDEAKERA RKVVGDVAYDEAKERASFITPVPGGVGPMT R K V E R A 2 1 0 2 0 0 2 1 0 0 0 2 0 0 0 0 0 0 1 3 0 0 14 2 1577.8049 P11586 P11586 251 264 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 1.1505E-05 162.7 By MS/MS By matching 4.25 0.433 3 1 3 1 16309000 16239000 69926 7755 556 8033 19326;19327;19328;19329 13648;13649 13648 2 444530 146120 KVVNPLFEK KVAPAPAVVKKQEAKKVVNPLFEKRPKNFG KKQEAKKVVNPLFEKRPKNFGIGQDIQPKR K K V E K R 0 0 1 0 0 0 1 0 0 0 1 2 0 1 1 0 0 0 0 2 0 0 9 1 1072.6281 P62424 P62424 26 34 RPL7A 60S ribosomal protein L7a yes yes 2 0.03538 106.68 By MS/MS 8 0 1 1 1188400 1188400 0 7756 1135 8034 19330 13650 13650 1 78399 0 KVVQLDVR LPHIENGGVAVLTGKKVVQLDVRDNMVKLN VAVLTGKKVVQLDVRDNMVKLNDGSQITYE K K V V R D 0 1 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 8 1 955.58147 O95831 O95831 232 239 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 0.01512 134.48 By MS/MS 5.75 0.829 2 1 1 4 10192000 10192000 0 7757 409 8035 19331;19332;19333;19334 13651;13652 13652 2 356580 0 KVVVSHSTHR VRTKMVYCKIDQTQRKVVVSHSTHRTFGKQ DQTQRKVVVSHSTHRTFGKQQWQQLYDTLN R K V H R T 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 3 0 0 10 1 1148.6414 Q7L2H7 Q7L2H7 331 340 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2;3 0.00058579 159.83 By MS/MS 7.33 0.471 2 1 3 2120900 2120900 0 7758 1764 8036 19335;19336;19337 13653;13654 13654 2 42542 0 KVYFHTDAAQAVGK VKQPIAEIGRICSSRKVYFHTDAAQAVGKI RKVYFHTDAAQAVGKIPLDVNDMKIDLMSI R K V G K I 3 0 0 1 0 1 0 1 1 0 0 2 0 1 0 0 1 0 1 2 0 0 14 1 1533.794 Q9Y697 Q9Y697 226 239 NFS1 Cysteine desulfurase, mitochondrial yes yes 3 0.038686 64.313 By MS/MS 7 0 1 1 954950 954950 0 7759 2998 8037 19338 13655 13655 1 17065 0 KYAVLYQPLFDK QIEAKFYEEVHDLERKYAVLYQPLFDKRFE LERKYAVLYQPLFDKRFEIINAIYEPTEEE R K Y D K R 1 0 0 1 0 1 0 0 0 0 2 2 0 1 1 0 0 0 2 1 0 0 12 1 1483.8075 P55209 P55209 105 116 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2;3 0.0006435 154.24 By MS/MS 6 0 2 2 3566500 3566500 0 7760 1030 8038 19339;19340 13656;13657 13656 2 27812 0 KYDEVLHMVR IDPTEFKFKLALINRKYDEVLHMVRNAKLV ALINRKYDEVLHMVRNAKLVGQSIIAYLQK R K Y V R N 0 1 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 1 2 0 0 10 1 1288.6598 P53621 P53621 607 616 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.00028766 166.19 By MS/MS 3.2 1.33 1 2 1 1 5 2521600 2521600 0 7761 1005 8039 19341;19342;19343;19344;19345 13658;13659;13660 13660 780 3 84310 0 KYEAAYGK FVDLYGAQKIVDRLKKYEAAYGKQFTPCQL KIVDRLKKYEAAYGKQFTPCQLLADHANSP K K Y G K Q 2 0 0 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 2 0 0 0 8 1 928.46543 P40939 P40939 735 742 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0058241 164.72 By MS/MS By matching 5 0 2 1 1 4167600 4156600 11011 7762 835 8040 19346;19347 13661 13661 1 170850 32583 KYEAIQLTFK GYKSIMELMNVLELRKYEAIQLTFKQVSKN VLELRKYEAIQLTFKQVSKNFSEVFQKLVP R K Y F K Q 1 0 0 0 0 1 1 0 0 1 1 2 0 1 0 0 1 0 1 0 0 0 10 1 1239.6863 Q9UQE7 Q9UQE7 1025 1034 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 2.0171E-06 188.99 By MS/MS 3 0 1 1 1242800 1242800 0 7763 2860 8041 19348 13662 13662 1 32442 0 KYEDEINKR SELNNMQDLVEDYKKKYEDEINKRTAAEND VEDYKKKYEDEINKRTAAENDFVTLKKDVD K K Y K R T 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1193.6041 CON__P35908v2;CON__P35908;P35908;CON__ENSEMBL:ENSBTAP00000038253 CON__P35908v2 267 275 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 2;3 8.4634E-11 228.05 By MS/MS By MS/MS 5 2.22 1 1 2 4 3 2 1 1 2 9 8 8927700 7329300 1598400 + 7764 52;32 8042 19349;19350;19351;19352;19353;19354;19355;19356;19357;19358;19359;19360;19361;19362;19363;19364;19365 13663;13664;13665;13666;13667;13668;13669;13670;13671;13672 13672 10 581750 6382000 KYEDICPSTHNMDVPNIK HAKVHLVGIDIFTGKKYEDICPSTHNMDVP DICPSTHNMDVPNIKRNDFQLIGIQDGYLS K K Y I K R 0 0 2 2 1 0 1 0 1 2 0 2 1 0 2 1 1 0 1 1 0 0 18 1 2159.998 P63241;Q6IS14;Q9GZV4 P63241 68 85 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 3 0.00020873 131.84 By MS/MS 9.5 0.5 1 1 2 3264800 3264800 0 7765 1177 8043 19366;19367 13673 13673 917 1 3376400 0 KYEDICPSTHNMDVPNIKR HAKVHLVGIDIFTGKKYEDICPSTHNMDVP ICPSTHNMDVPNIKRNDFQLIGIQDGYLSL K K Y K R N 0 1 2 2 1 0 1 0 1 2 0 2 1 0 2 1 1 0 1 1 0 0 19 2 2316.0991 P63241;Q6IS14;Q9GZV4 P63241 68 86 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 4 0.038852 51.798 By MS/MS 10 0 1 1 751470 751470 0 7766 1177 8044 19368 13674 13674 917 1 798730 0 KYEEIDNAPEER AITKILAEGGGAKFKKYEEIDNAPEERARG KFKKYEEIDNAPEERARGITINAAHVEYST K K Y E R A 1 1 1 1 0 0 4 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 12 1 1491.6842 P49411 P49411 91 102 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 6.9953E-24 248.98 By MS/MS 7.71 1.28 1 3 1 1 1 7 91626000 91626000 0 7767 918 8045 19369;19370;19371;19372;19373;19374;19375 13675;13676;13677;13678;13679 13677 5 2213300 0 KYEEIDNAPEERAR AITKILAEGGGAKFKKYEEIDNAPEERARG KKYEEIDNAPEERARGITINAAHVEYSTAA K K Y A R G 2 2 1 1 0 0 4 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 14 2 1718.8224 P49411 P49411 91 104 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.040464 100.73 By MS/MS 7 0 1 1 16993000 16993000 0 7768 918 8046 19376 13680 13680 1 303670 0 KYEQGFITDPVVLSPK NCTPEFQANEVRKVKKYEQGFITDPVVLSP YEQGFITDPVVLSPKDRVRDVFEAKARHGF K K Y P K D 0 0 0 1 0 1 1 1 0 1 1 2 0 1 2 1 1 0 1 2 0 0 16 1 1819.972 P12268 P12268 109 124 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.00086985 117.4 By MS/MS 6 0 1 1 7195500 7195500 0 7769 564 8047 19377 13681 13681 1 56111 0 KYGTDLSR VSMDDHKLSLDELHRKYGTDLSRGLTSARA SLDELHRKYGTDLSRGLTSARAAEILARDG R K Y S R G 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 8 1 938.48214 P05023 P05023 54 61 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.057968 113.26 By MS/MS 2.5 1.12 1 1 1 1 4 3733900 3733900 0 7770 463 8048 19378;19379;19380;19381 13682 13682 1 127340 0 KYHNVGLSK ITFKEEEPVKKIMEKKYHNVGLSKCEIKVA KKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ K K Y S K C 0 0 1 0 0 0 0 1 1 0 1 2 0 0 0 1 0 0 1 1 0 0 9 1 1044.5716 Q14103 Q14103 243 251 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 2;3 0.0062384 117.81 By MS/MS 7 0 2 2 5815400 5815400 0 7771 1406 8049 19382;19383 13683;13684 13684 2 103920 0 KYHPDTNKDDPK ASQKEIKKAYYQLAKKYHPDTNKDDPKAKE LAKKYHPDTNKDDPKAKEKFSQLAEAYEVL K K Y P K A 0 0 1 3 0 0 0 0 1 0 0 3 0 0 2 0 1 0 1 0 0 0 12 2 1456.6947 Q96EY1 Q96EY1 119 130 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2;3 3.7334E-06 172.21 By MS/MS 7.33 0.471 2 1 3 7303900 7303900 0 7772 2169 8050 19384;19385;19386 13685;13686 13686 2 134590 0 KYLLGVQPAWGSAEAVDIDR AGVGVEHEHLVDCARKYLLGVQPAWGSAEA VQPAWGSAEAVDIDRSVAQYTGGIAKLERD R K Y D R S 3 1 0 2 0 1 1 2 0 1 2 1 0 0 1 1 0 1 1 2 0 0 20 1 2187.1324 Q10713 Q10713 269 288 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 3 0.039213 70.114 By MS/MS 6 0 1 1 1840500 1840500 0 7773 1301 8051 19387 13687 13687 0 14352 0 KYQLAVTK SVFGRLFDLCHPIHKKYQLAVTKVFGRFIT LCHPIHKKYQLAVTKVFGRFITAIVVASEK K K Y T K V 1 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 1 0 1 1 0 0 8 1 949.55967 Q8NDV3 Q8NDV3 529 536 SMC1B Structural maintenance of chromosomes protein 1B yes yes 2 0.0064202 162.25 By MS/MS 3 0 1 1 548980 548980 0 7774 1958 8052 19388 13688 13688 1 14331 0 KYTEQITNEK ILDVLEEIPKNAAYRKYTEQITNEKLAMVK NAAYRKYTEQITNEKLAMVKAEPDVKKLED R K Y E K L 0 0 1 0 0 1 2 0 0 1 0 2 0 0 0 0 2 0 1 0 0 0 10 1 1252.6299 Q16718 Q16718 46 55 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2;3 1.3161E-10 211.78 By MS/MS 10 0 2 2 1827900 1827900 0 7775 1544 8053 19389;19390 13689;13690 13689 2 1942900 0 KYTGEDFDEDLR AWMNGLSVYQIKVHRKYTGEDFDEDLRTVL VHRKYTGEDFDEDLRTVLRRSGCKNEKIAF R K Y L R T 0 1 0 3 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 12 1 1486.6576 Q14204 Q14204 2966 2977 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.039389 77.527 By MS/MS 1 0 1 1 0 0 0 7776 1421 8054 19391 13691 13691 1 0 0 LAACGAEAAAYGR VWGRVRSRLRAFPERLAACGAEAAAYGRCV ERLAACGAEAAAYGRCVQASTAPGGRLSKD R L A G R C 6 1 0 0 1 0 1 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 13 0 1279.5979 A1L188 A1L188 22 34 C17orf89 Uncharacterized protein C17orf89 yes yes 2 0.0004443 138.22 By MS/MS 10 0 1 1 179810 179810 0 7777 9 8055 19392 13692 13692 1 191120 0 LAADAGTFLSR ______________________________ NVKKLAADAGTFLSRAVQFTEEKLGQAEKT K L A S R A 3 1 0 1 0 0 0 1 0 0 2 0 0 1 0 1 1 0 0 0 0 0 11 0 1120.5877 Q9Y371 Q9Y371 11 21 SH3GLB1 Endophilin-B1 yes yes 2 0.00099233 133.75 By MS/MS 7 0 1 1 1727900 1727900 0 7778 2914 8056 19393 13693 13693 1 30879 0 LAADDFR TTDNANILLQIDNARLAADDFRLKYENEVA LLQIDNARLAADDFRLKYENEVALRQSVEA R L A F R L 2 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 806.39227 CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__P05784;CON__Q2M2I5;Q2M2I5;CON__Q14525;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;CON__Q92764;CON__Q14532;CON__A2AB72;CON__Q497I4;CON__O76015;CON__O76013;CON__O76014;CON__REFSEQ:XP_986630;Q14525;Q15323;P05783;Q14532;O76014;Q92764;O76015;O76013;CON__P02533;P02533;CON__Q6IFX2;CON__P19012;CON__A2A4G1;P19012;CON__P08727;CON__P19001;P08727;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;CON__Q9QWL7 CON__P13645 229 235 KRT10;KRT28;KRT24;KRT33B;KRT31;KRT18;KRT32;KRT37;KRT35;KRT38;KRT36;KRT14;KRT15;KRT19;KRT16;KRT17 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 24;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha7;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha8;Keratin, type I cuticular Ha6;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 2 0.019099 128.86 By MS/MS By MS/MS 4.75 2.95 2 1 2 2 1 1 1 1 1 8 4 58809000 44138000 14671000 + 7779 49;35;47;54 8057 19394;19395;19396;19397;19398;19399;19400;19401;19402;19403;19404;19405 13694;13695;13696;13697;13698 13698 5 9957000 29133000 LAADFQR ______________________________ DAWEEIRRLAADFQRAQFAEATQRLSERNC R L A Q R A 2 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 819.4239 O94874 O94874 11 17 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.047712 102.71 By MS/MS 5 0 1 1 3641100 3641100 0 7780 354 8058 19406 13699 13699 1 149660 0 LAADFSVPLIIDIK RRLSSFVTKGYRTRRLAADFSVPLIIDIKC RLAADFSVPLIIDIKCTKLFVEALGQIGPA R L A I K C 2 0 0 2 0 0 0 0 0 3 2 1 0 1 1 1 0 0 0 1 0 0 14 0 1513.8756 P27708 P27708 1418 1431 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.015525 86.014 By MS/MS 2 0 1 1 40225 40225 0 7781 709 8059 19407 13700 13700 1 1999.4 0 LAADVGK TSLCFVYPLDFARTRLAADVGKAGAEREFR PLDFARTRLAADVGKAGAEREFRGLGDCLV R L A G K A 2 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 672.38064 P05141;P12235;P12236 P05141 141 147 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.036253 110.63 By MS/MS By matching 4.29 2.37 1 1 1 1 1 1 1 6 1 275630000 275580000 43944 7782 469;563;562 8060 19408;19409;19410;19411;19412;19413;19414 13701;13702 13702 2 16451000 180400 LAADVGKAGAER TSLCFVYPLDFARTRLAADVGKAGAEREFR RTRLAADVGKAGAEREFRGLGDCLVKIYKS R L A E R E 4 1 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 1 0 0 12 1 1156.62 P05141 P05141 141 152 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.0024608 141.71 By MS/MS By matching 5.69 3.52 2 2 2 3 2 2 12 1 58581000 58482000 98381 7783 469 8061 19415;19416;19417;19418;19419;19420;19421;19422;19423;19424;19425;19426;19427 13703;13704;13705;13706;13707;13708;13709;13710;13711 13703 9 5209000 839310 LAADVGKAGAEREFR TSLCFVYPLDFARTRLAADVGKAGAEREFR LAADVGKAGAEREFRGLGDCLVKIYKSDGI R L A F R G 4 2 0 1 0 0 2 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 15 2 1588.8322 P05141 P05141 141 155 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.039744 129.74 By MS/MS 8 0 2 2 9387800 9387800 0 7784 469 8062 19428;19429 13712;13713 13713 2 619310 0 LAADVGKSGTER TSLCFVYPLDFARTRLAADVGKSGTEREFR RTRLAADVGKSGTEREFRGLGDCLVKITKS R L A E R E 2 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 1 0 0 1 0 0 12 1 1202.6255 P12236 P12236 141 152 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.0035746 139.32 By MS/MS 4.5 3.04 1 1 1 1 4 2719400 2719400 0 7785 563 8063 19430;19431;19432;19433 13714;13715 13715 2 159740 0 LAAEQFCTR EVDTAKNKEKLEKLRLAAEQFCTRLGRYRM KLEKLRLAAEQFCTRLGRYRMPFAWTAVHL R L A T R L 2 1 0 0 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1094.5179 Q96HP0 Q96HP0 378 386 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.010176 104.42 By MS/MS 1.5 0.5 1 1 2 393750 393750 0 7786 2193 8064 19434;19435 13716 13716 1 19525 0 LAAGDQLLSVDGR VKSVVKGGAADVDGRLAAGDQLLSVDGRSL GRLAAGDQLLSVDGRSLVGLSQERAAELMT R L A G R S 2 1 0 2 0 1 0 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 13 0 1313.6939 P55196 P55196 1052 1064 MLLT4 Afadin yes yes 2 0.00030721 142.76 By MS/MS 3 0.816 1 1 1 3 1087800 1087800 0 7787 1029 8065 19436;19437;19438 13717 13717 1 40482 0 LAAIAESGVER ALAMERDGSSGGVIRLAAIAESGVERQVLL GVIRLAAIAESGVERQVLLGDQIPKFAVAT R L A E R Q 3 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1114.5982 P28072 P28072 210 220 PSMB6 Proteasome subunit beta type-6 yes yes 2 0.00071536 137.46 By MS/MS By matching 9.33 0.471 2 1 2 1 19639000 19561000 77963 7788 714 8066 19439;19440;19441 13718;13719 13718 2 11352000 840220 LAALESSIEQR TLSQIETSIATVQEKLAALESSIEQRLKWA VQEKLAALESSIEQRLKWAGGANPALAPVL K L A Q R L 2 1 0 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1215.6459 Q96Q15 Q96Q15 3250 3260 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.00091074 134.84 By MS/MS 1 0 1 1 483360 483360 0 7789 2241 8067 19442 13720 13720 1 23616 0 LAALNPESNTAGLDIFAK EEFLEAVLCPPRYPKLAALNPESNTAGLDI LNPESNTAGLDIFAKFSAYIKNSNPALNDN K L A A K F 4 0 2 1 0 0 1 1 0 1 3 1 0 1 1 1 1 0 0 0 0 0 18 0 1843.968 O00299 O00299 96 113 CLIC1 Chloride intracellular channel protein 1 yes yes 2 2.2332E-14 191.01 By MS/MS 8.5 0.5 1 1 2 912330 912330 0 7790 87 8068 19443;19444 13721 13721 1 85157 0 LAALPENPPAIDWAYYK IASSLKSWNETLTSRLAALPENPPAIDWAY ALPENPPAIDWAYYKANVAKAGLVDDFEKK R L A Y K A 4 0 1 1 0 0 1 0 0 1 2 1 0 0 3 0 0 1 2 0 0 0 17 0 1930.9829 O75947 O75947 42 58 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.0085584 95.417 By MS/MS 9 0 1 1 278080 278080 0 7791 340 8069 19445 13722 13722 1 159590 0 LAALPNVYEVISK FAGAVSPQEEEEFRRLAALPNVYEVISKSI RRLAALPNVYEVISKSIAPSIFGGTDMKKA R L A S K S 2 0 1 0 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 2 0 0 13 0 1415.8024 P33992 P33992 325 337 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.010687 94.402 By MS/MS 5 0.816 1 1 1 3 4226900 4226900 0 7792 774 8070 19446;19447;19448 13723;13724 13723 2 98935 0 LAALTQGSYLHQR VHGRQQEILGVLVPRLAALTQGSYLHQRVC PRLAALTQGSYLHQRVCWRLVEQVPDRAME R L A Q R V 2 1 0 0 0 2 0 1 1 0 3 0 0 0 0 1 1 0 1 0 0 0 13 0 1456.7787 Q9Y4R8 Q9Y4R8 238 250 TELO2 Telomere length regulation protein TEL2 homolog yes yes 3 0.030106 63.864 By MS/MS 4 0 1 1 954340 954340 0 7793 2958 8071 19449 13725 13725 0 26052 0 LAANDFFR AAVNLTLVTPEKAIKLAANDFFRHQLSKDG TPEKAIKLAANDFFRHQLSKDGQKLTLLKE K L A F R H 2 1 1 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 952.47667 Q9H936;Q9H1K4 Q9H936 84 91 SLC25A22;SLC25A18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 yes no 2 0.00011127 193.86 By MS/MS 9 0.816 1 1 1 3 17097000 17097000 0 7794 2528 8072 19450;19451;19452 13726 13726 1 1210600 0 LAAPLLK ILLANKKDLEEAEGRLAAPLLKRLSLSTSK DLEEAEGRLAAPLLKRLSLSTSKLNSLAIG R L A L K R 2 0 0 0 0 0 0 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 7 0 724.48471 P54886 P54886 418 424 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.03389 112.27 By MS/MS 6.5 0.5 1 1 2 6770400 6770400 0 7795 1019 8073 19453;19454 13727 13727 1 56395 0 LAAPLLKR ILLANKKDLEEAEGRLAAPLLKRLSLSTSK LEEAEGRLAAPLLKRLSLSTSKLNSLAIGL R L A K R L 2 1 0 0 0 0 0 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 8 1 880.58582 P54886 P54886 418 425 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.043734 118.01 By MS/MS By matching 5.33 0.471 2 1 2 1 2750900 2737400 13423 7796 1019 8074 19455;19456;19457 13728 13728 1 98842 39719 LAAQENRPVTDHLDEQAVQGLK GSILACAEVAYALYKLAAQENRPVTDHLDE PVTDHLDEQAVQGLKQIHQQLYDRQLYRGL K L A L K Q 3 1 1 2 0 3 2 1 1 0 3 1 0 0 1 0 1 0 0 2 0 0 22 1 2431.2456 Q9BTW9 Q9BTW9 635 656 TBCD Tubulin-specific chaperone D yes yes 3 0.029883 50.916 By MS/MS 4 0 1 1 819540 819540 0 7797 2354 8075 19458 13729 13729 1 22373 0 LAAQSCALSLVR LGRRIFAREHGSNKKLAAQSCALSLVRQLY NKKLAAQSCALSLVRQLYHLGVVEAYSGLT K L A V R Q 3 1 0 0 1 1 0 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 0 1287.6969 Q08211 Q08211 237 248 DHX9 ATP-dependent RNA helicase A yes yes 2 6.323E-05 163.12 By MS/MS 3.33 1.25 1 1 1 3 6126200 6126200 0 7798 1287 8076 19459;19460;19461 13730;13731;13732 13731 3 174180 0 LAASVPYVK FAPNSVHYLLSLWQRLAASVPYVKATEPHM LSLWQRLAASVPYVKATEPHMLETYTPEVT R L A V K A 2 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 9 0 946.54877 Q9UIA9 Q9UIA9 387 395 XPO7 Exportin-7 yes yes 2 0.0016483 133.6 By MS/MS 4 0 1 1 756990 756990 0 7799 2790 8077 19462 13733 13733 1 20665 0 LAATNALLNSLEFTK IIQGMRKEEPSNNVKLAATNALLNSLEFTK LAATNALLNSLEFTKANFDKESERHFIMQV K L A T K A 3 0 2 0 0 0 1 0 0 0 4 1 0 1 0 1 2 0 0 0 0 0 15 0 1604.8774 Q14974 Q14974 192 206 KPNB1 Importin subunit beta-1 yes yes 2 1.9103E-92 341.72 By MS/MS 5 1 1 1 2 2764700 2764700 0 7800 1452 8078 19463;19464 13734;13735 13734 2 48200 0 LAAVDATVNQVLASR AAASEVKEQTKGKVKLAAVDATVNQVLASR LAAVDATVNQVLASRYGIRGFPTIKIFQKG K L A S R Y 4 1 1 1 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 15 0 1526.8417 Q15084 Q15084 217 231 PDIA6 Protein disulfide-isomerase A6 yes yes 2 2.0481E-20 218.02 By MS/MS 6 0 1 1 21997000 21997000 0 7801 1478 8079 19465 13736 13736 1 171530 0 LAAVVSACK AVNLYGPDAQVDRSRLAAVVSACKQLHRAG QVDRSRLAAVVSACKQLHRAGLLHNILPSQ R L A C K Q 3 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 0 917.50044 P78527 P78527 1448 1456 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0051036 115.49 By MS/MS 2 0.816 1 1 1 3 6649300 6649300 0 7802 1197 8080 19466;19467;19468 13737 13737 1 301860 0 LACDVDQVTR PMYQLYKRTFPVLLRLACDVDQVTRQLYEP PVLLRLACDVDQVTRQLYEPLVMQLIHWFT R L A T R Q 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1175.5605 P78527 P78527 972 981 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.301E-07 188.87 By MS/MS 2.5 1.12 1 1 1 1 4 15772000 15772000 0 7803 1197 8081 19469;19470;19471;19472 13738;13739;13740 13738 3 681880 0 LACLSEEGNEIESGK EYVKSLTANPELIDRLACLSEEGNEIESGK LACLSEEGNEIESGKIIFSEHLPLSKLQQG R L A G K I 1 0 1 0 1 0 4 2 0 1 2 1 0 0 0 2 0 0 0 0 0 0 15 0 1634.7458 Q9Y2L1 Q9Y2L1 211 225 DIS3 Exosome complex exonuclease RRP44 yes yes 2 5.2192E-77 314.48 By MS/MS 4.5 1.12 1 1 1 1 4 4623100 4623100 0 7804 2892 8082 19473;19474;19475;19476 13741 13741 1 111610 0 LACMEEFQK PTCIQLLDSSNWKERLACMEEFQKAVELMD SNWKERLACMEEFQKAVELMDRTEMPCQAL R L A Q K A 1 0 0 0 1 1 2 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 9 0 1154.51 Q14008 Q14008 617 625 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.030852 90.601 By MS/MS 2 0 1 1 727320 727320 0 7805 1405 8083 19477 13742 13742 1 36152 0 LADDYQQK EKFTAILYRTLERRRLADDYQQKRWSWGGS RTLERRRLADDYQQKRWSWGGSAMANSESK R L A Q K R 1 0 0 2 0 2 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 0 979.46108 Q8IWC1 Q8IWC1 155 162 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.014016 114.5 By MS/MS 3 0 1 1 531930 531930 0 7806 1864 8084 19478 13743 13743 1 13886 0 LADFGALHR MFAHRPRSWRELPLRLADFGALHRAEASGG RELPLRLADFGALHRAEASGGLGGLTRLRC R L A H R A 2 1 0 1 0 0 0 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 998.52976 Q9BW92 Q9BW92 430 438 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2;3 0.00061102 147.19 By MS/MS 5 0.707 1 2 1 4 11508000 11508000 0 7807 2391 8085 19479;19480;19481;19482 13744;13745 13744 2 382180 0 LADFGLAK LKPNNLLLDENGVLKLADFGLAKSFGSPNR DENGVLKLADFGLAKSFGSPNRAYTHQVVT K L A A K S 2 0 0 1 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 8 0 833.4647 P50613;Q9C098 P50613 153 160 CDK7;DCLK3 Cyclin-dependent kinase 7;Serine/threonine-protein kinase DCLK3 yes no 2 0.02392 101.69 By MS/MS 7 0 1 1 564180 564180 0 7808 950 8086 19483 13746 13746 1 10082 0 LADFGLAR LKPQNLLIDDKGTIKLADFGLARAFGIPIR DDKGTIKLADFGLARAFGIPIRVYTHEVVT K L A A R A 2 1 0 1 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 861.47085 P06493;Q00534;Q96Q40;O94921;Q07002;Q00536;Q00537;Q9NYV4;Q14004;P50750;P11802;P24941;Q00526;Q00535 P06493 144 151 CDK1;CDK6;CDK15;CDK14;CDK18;CDK16;CDK17;CDK12;CDK13;CDK9;CDK4;CDK2;CDK3;CDK5 Cyclin-dependent kinase 1;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 17;Cyclin-dependent kinase 12;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 4;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent-like kinase 5 no no 2 0.018685 108.46 By MS/MS 8.5 1.12 1 1 1 1 4 37513000 37513000 0 7809 477;682;951;1233;558 8087 19484;19485;19486;19487 13747 13747 1 2665500 0 LADGGATNQGR LLVAGTQGVNDGDMRLADGGATNQGRVEIF GDMRLADGGATNQGRVEIFYRGQWGTVCDN R L A G R V 2 1 1 1 0 1 0 3 0 0 1 0 0 0 0 0 1 0 0 0 0 0 11 0 1058.5105 Q08380 Q08380 26 36 LGALS3BP Galectin-3-binding protein yes yes 2 0.0005888 139.15 By MS/MS 5 0 1 1 319770 319770 0 7810 1289 8088 19488 13748 13748 1 13144 0 LADIEQSTGIR YPSQPDHTEKLTMWRLADIEQSTGIRLTES TMWRLADIEQSTGIRLTESLAMAPASAVSG R L A I R L 1 1 0 1 0 1 1 1 0 2 1 0 0 0 0 1 1 0 0 0 0 0 11 0 1201.6303 Q99707 Q99707 1192 1202 MTR Methionine synthase yes yes 2 3.2007E-16 224.75 By MS/MS 3.5 0.5 1 1 2 3996900 3996900 0 7811 2284 8089 19489;19490 13749 13749 1 104730 0 LADIQIEQLNR TELQAKVIDTQQKVKLADIQIEQLNRTKKH QKVKLADIQIEQLNRTKKHAHLTDTEIMTL K L A N R T 1 1 1 1 0 2 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1311.7147 O60925 O60925 29 39 PFDN1 Prefoldin subunit 1 yes yes 2 1.8844E-17 232.72 By MS/MS 10 0 1 1 3567100 3567100 0 7812 274 8090 19491 13750 13750 1 3791500 0 LADPVTPVETILQR SEVGTILRNCVHVQKLADPVTPVETILQRC KLADPVTPVETILQRCNLEEISNYYGVSGF K L A Q R C 1 1 0 1 0 1 1 0 0 1 2 0 0 0 2 0 2 0 0 2 0 0 14 0 1550.8668 Q9NVN8 Q9NVN8 328 341 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 2 0.0017482 117.86 By MS/MS 5 0 1 1 399490 399490 0 7813 2658 8091 19492 13751 13751 1 16421 0 LADQIFAYYK IEAEVNLCFDQFVYKLADQIFAYYKVMAGS QFVYKLADQIFAYYKVMAGSLLLDKRLRSE K L A Y K V 2 0 0 1 0 1 0 0 0 1 1 1 0 1 0 0 0 0 2 0 0 0 10 0 1230.6285 Q7L576;Q96F07 Q7L576 706 715 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.00016756 157.99 By MS/MS 3 0 1 1 526530 526530 0 7814 1765 8092 19493 13752 13752 1 13745 0 LADQSGLDVIR IHCKSVEEISTLVQKLADQSGLDVIRIRKP LVQKLADQSGLDVIRIRKPFHTDNPSIQGQ K L A I R I 1 1 0 2 0 1 0 1 0 1 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1185.6354 Q8N983 Q8N983 104 114 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.022444 87.149 By MS/MS 6.5 0.5 1 1 2 10539000 10539000 0 7815 1935 8093 19494;19495 13753 13753 1 86562 0 LADVVTPLWR KPSHLGPLDGSWQERLADVVTPLWRLSYEE SWQERLADVVTPLWRLSYEEQLKVKFAAQK R L A W R L 1 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 0 2 0 0 10 0 1168.6604 Q96GJ1 Q96GJ1 84 93 TRMT2B tRNA (uracil(54)-C(5))-methyltransferase homolog yes yes 2 0.0037755 111.46 By MS/MS 7 0 1 1 473930 473930 0 7816 2183 8094 19496 13754;13755 13754 2 8469.2 0 LAEAFAEELHER GDDYSSIMVKALGDRLAEAFAEELHERVRR GDRLAEAFAEELHERVRRELWAYCGSEQLD R L A E R V 3 1 0 0 0 0 4 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1413.6888 Q99707 Q99707 1133 1144 MTR Methionine synthase yes yes 2;3 0.00094809 133.91 By MS/MS 3 0 2 2 2361400 2361400 0 7817 2284 8095 19497;19498 13756;13757 13757 2 61645 0 LAEAQIEELR QVEEVHQLSRKAETKLAEAQIEELRQKTQE KAETKLAEAQIEELRQKTQEEGEERAESEQ K L A L R Q 2 1 0 0 0 1 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1170.6245 Q9NR28 Q9NR28 208 217 DIABLO Diablo homolog, mitochondrial yes yes 2 0.0034117 120.63 By MS/MS 9 0.816 1 1 1 3 3721900 3721900 0 7818 2598 8096 19499;19500;19501 13758 13758 1 1703800 0 LAEAQIEELRQK QVEEVHQLSRKAETKLAEAQIEELRQKTQE ETKLAEAQIEELRQKTQEEGEERAESEQEA K L A Q K T 2 1 0 0 0 2 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1426.778 Q9NR28 Q9NR28 208 219 DIABLO Diablo homolog, mitochondrial yes yes 2 0.0014802 152.64 By MS/MS 9 0 1 1 418360 418360 0 7819 2598 8097 19502 13759 13759 1 240100 0 LAEDAPNFDGPAAEGQPGQK EEPKYSSLYAQLCLRLAEDAPNFDGPAAEG PNFDGPAAEGQPGQKQSTTFRRLLISKLQD R L A Q K Q 4 0 1 2 0 2 2 3 0 0 1 1 0 1 3 0 0 0 0 0 0 0 20 0 2010.9283 P78344 P78344 139 158 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 8.5606E-25 210.02 By MS/MS 4.5 0.5 1 1 2 12184000 12184000 0 7820 1192 8098 19503;19504 13760 13760 1 349960 0 LAEEENKAK QLAREKKLYANMFERLAEEENKAKAEASSG ANMFERLAEEENKAKAEASSGDHPTDTEMK R L A A K A 2 0 1 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1030.5295 Q02790 Q02790 418 426 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.0015862 163.15 By MS/MS 6 0 1 1 8695300 8695300 0 7821 1255 8099 19505 13761 13761 1 67806 0 LAEEHSS YMVGPIEEAVAKADKLAEEHSS________ EAVAKADKLAEEHSS_______________ K L A S S - 1 0 0 0 0 0 2 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 7 0 771.3399 P06576 P06576 523 529 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.019537 127.66 By MS/MS By matching 6 0 2 1 1 8058200 8004800 53344 7822 478 8100 19506;19507 13762 13762 1 62422 163600 LAEENPDLQEAYIAK RIRSQIGNTESELKKLAEENPDLQEAYIAK LAEENPDLQEAYIAKQKRLKSKLLDHDNVK K L A A K Q 3 0 1 1 0 1 3 0 0 1 2 1 0 0 1 0 0 0 1 0 0 0 15 0 1702.8414 Q8TB36 Q8TB36 174 188 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes yes 2 3.9893E-10 189.3 By MS/MS 7 0 1 1 2056000 2056000 0 7823 1986 8101 19508 13763 13763 1 36741 0 LAEFGAAGVNR EVTLEANPTSAPGSRLAEFGAAGVNRLSIG PGSRLAEFGAAGVNRLSIGLQSLDDTELRL R L A N R L 3 1 1 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 1 0 0 11 0 1103.5724 Q9HA92 Q9HA92 142 152 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial yes yes 2 4.2627E-05 170.5 By MS/MS 6.5 0.5 1 1 2 6209800 6209800 0 7824 2541 8102 19509;19510 13764 13764 1 104290 0 LAEGAER LLLATASGNANMVNKLAEGAERDGKNNVAF GNANMVNKLAEGAERDGKNNVAFMSYFLQG K L A E R D 2 1 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 744.37662 P35606 P35606 715 721 COPB2 Coatomer subunit beta yes yes 2 0.015469 138.85 By MS/MS 1.5 0.5 1 1 2 1393400 1393400 0 7825 795 8103 19511;19512 13765 13765 1 68383 0 LAEGEQILSGGVFNK QCKYLLAKCCVDLSKLAEGEQILSGGVFNK LAEGEQILSGGVFNKQKSHDDIVTEFGDSA K L A N K Q 1 0 1 0 0 1 2 3 0 1 2 1 0 1 0 1 0 0 0 1 0 0 15 0 1560.8148 P30260 P30260 85 99 CDC27 Cell division cycle protein 27 homolog yes yes 2 1.634E-20 221.09 By MS/MS 5 1.41 1 1 1 1 1 5 6288800 6288800 0 7826 739 8104 19513;19514;19515;19516;19517 13766 13766 1 95806 0 LAEGVQLLCLIDK STIKLVATNMIANGKLAEGVQLLCLIDKAA GKLAEGVQLLCLIDKAADACRYLQTYGEWN K L A D K A 1 0 0 1 1 1 1 1 0 1 4 1 0 0 0 0 0 0 0 1 0 0 13 0 1470.8116 Q9BZH6 Q9BZH6 1063 1075 WDR11 WD repeat-containing protein 11 yes yes 2 0.0040289 108.72 By MS/MS 3.5 0.5 1 1 2 147480 147480 0 7827 2422 8105 19518;19519 13767;13768 13767 2 3925.2 0 LAEIGAPIQGNR PGHYGAWAAQELQAKLAEIGAPIQGNREEL QAKLAEIGAPIQGNREELVERLQSYTRQTG K L A N R E 2 1 1 0 0 1 1 2 0 2 1 0 0 0 1 0 0 0 0 0 0 0 12 0 1237.6779 Q13435 Q13435 36 47 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.0023655 119.22 By MS/MS 3 0 1 1 497470 497470 0 7828 1369 8106 19520 13769 13769 1 12987 0 LAEIGAPIQGNREELVER PGHYGAWAAQELQAKLAEIGAPIQGNREEL IGAPIQGNREELVERLQSYTRQTGIVLNRP K L A E R L 2 2 1 0 0 1 4 2 0 2 2 0 0 0 1 0 0 0 0 1 0 0 18 1 1993.0593 Q13435 Q13435 36 53 SF3B2 Splicing factor 3B subunit 2 yes yes 2 0.043771 94.688 By MS/MS 3 0 1 1 812170 812170 0 7829 1369 8107 19521 13770 13770 1 21202 0 LAEISHR LDEQEFVYKEPAITKLAEISHRLEGFYGER YKEPAITKLAEISHRLEGFYGERFGEDVVE K L A H R L 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 824.45045 Q96N67;Q96HP0 Q96N67 1870 1876 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 no no 2 0.015644 138.37 By MS/MS 2 0 1 1 896430 896430 0 7830 2230;2193 8108 19522 13771 13771 1 44557 0 LAELCGVLK VLRSCGTLTLKPPGRLAELCGVLKAVLQRK LKPPGRLAELCGVLKAVLQRKTACQDTDEE R L A L K A 1 0 0 0 1 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 1001.558 Q8TEX9 Q8TEX9 793 801 IPO4 Importin-4 yes yes 2 0.00048103 153.78 By MS/MS 4 0 1 1 3283800 3283800 0 7831 2005 8109 19523 13772 13772 1 89645 0 LAELEDALQKAK AEQRGELALKDARSKLAELEDALQKAKQDM RSKLAELEDALQKAKQDMARLLREYQELMN K L A A K Q 3 0 0 1 0 1 2 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 12 1 1327.7347 CON__Q5XQN5 CON__Q5XQN5 433 444 yes yes 3 0.052688 43.501 By MS/MS 8 0 1 1 1802900 1802900 0 + 7832 61 8110 19524 13773 13773 1 118940 0 LAELEEALQK AEQRGELALKDARNKLAELEEALQKAKQDM DARNKLAELEEALQKAKQDMARLLREYQEL K L A Q K A 2 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1142.6183 CON__P13647;P13647 CON__P13647 432 441 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.00075438 134.25 By matching By MS/MS 2.25 0.829 1 1 2 1 3 336740 58166 278570 + 7833 50 8111 19525;19526;19527;19528 13774;13775 13775 2 1518.4 281690 LAELQAK ______________________________ LEALRRQRLAELQAKHGDPGDAAQQEAKHR R L A A K H 2 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 771.44905 O14737 O14737 14 20 PDCD5 Programmed cell death protein 5 yes yes 2 0.015689 138.24 By MS/MS 10 0 1 1 1487700 1487700 0 7834 124 8112 19529 13776 13776 1 1581300 0 LAENACTLADLTEGQVGK GQVVLIKQEKDREAKLAENACTLADLTEGQ NACTLADLTEGQVGKLLIRKSGRVQLLLGK K L A G K L 3 0 1 1 1 1 2 2 0 0 3 1 0 0 0 0 2 0 0 1 0 0 18 0 1888.92 P05423 P05423 311 328 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 2 1.4627E-18 255.39 By MS/MS 6 0 1 1 5261000 5261000 0 7835 475 8113 19530 13777 13777 1 41025 0 LAEQAER ______________________________ NELVQKAKLAEQAERYDDMAACMKSVTEQG K L A E R Y 2 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 815.41373 P27348;P62258;P31946;P31947;P61981;P63104;Q04917 P63104 12 18 YWHAQ;YWHAE;YWHAB;SFN;YWHAG;YWHAZ;YWHAH 14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein eta no no 2 0.016936 134.81 By MS/MS By matching 8 0 2 1 1 6192500 6098100 94452 7836 1121;1169;703;760;1111;1268;761 8114 19531;19532 13778 13778 1 402290 805790 LAEQAERYDDMAAAMK ______________________________ AEQAERYDDMAAAMKAVTEQGHELSNEERN K L A M K A 5 1 0 2 0 1 2 0 0 0 1 1 2 0 0 0 0 0 1 0 0 0 16 1 1811.8182 P31946;P61981 P31946 14 29 YWHAB;YWHAG 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 3 0.017426 70.197 By MS/MS 8 0 1 1 476380 476380 0 7837 760;1111 8115 19533 13779 13779 512 1 31426 0 LAEQAERYDEMVESMKK ______________________________ EQAERYDEMVESMKKVAGMDVELTVEERNL K L A K K V 2 1 0 1 0 1 4 0 0 0 1 2 2 0 0 1 0 0 1 1 0 0 17 2 2055.9605 P62258 P62258 13 29 YWHAE 14-3-3 protein epsilon yes yes 3 9.0162E-05 126.63 By MS/MS 8 0 1 1 947980 947980 0 7838 1121 8116 19534 13780 13780 875;876 1 62538 0 LAESMIQNLIK YEEIRMMILEVDETRLAESMIQNLIKHLPD DETRLAESMIQNLIKHLPDQEQLNSLSQFK R L A I K H 1 0 1 0 0 1 1 0 0 2 2 1 1 0 0 1 0 0 0 0 0 0 11 0 1258.6955 Q9NSV4 Q9NSV4 749 759 DIAPH3 Protein diaphanous homolog 3 yes yes 2 6.693E-06 175.93 By MS/MS 3.5 0.5 1 1 2 277410 277410 0 7839 2628 8117 19535;19536 13781 13781 1 7311.3 0 LAETLAK ______________________________ MASEDIAKLAETLAKTQVAGGQLSFKGKSL K L A A K T 2 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 7 0 744.43815 P46060 P46060 9 15 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.022086 120.65 By MS/MS 5.5 0.5 1 1 2 4608600 4608600 0 7840 876 8118 19537;19538 13782 13782 1 151890 0 LAETQEEISAEVAAK FIADCDRRTEVAKKRLAETQEEISAEVAAK LAETQEEISAEVAAKAERVHELNEEIGKLL R L A A K A 4 0 0 0 0 1 4 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 15 0 1587.7992 Q9Y383 Q9Y383 108 122 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 2 1.5696E-05 169.58 By MS/MS 6.5 0.5 1 1 2 3075200 3075200 0 7841 2917 8119 19539;19540 13783;13784 13784 2 35645 0 LAETQNIAPSFVK TLKSRTRRLQSTSERLAETQNIAPSFVKGF ERLAETQNIAPSFVKGFLLRDRGSDVESLD R L A V K G 2 0 1 0 0 1 1 0 0 1 1 1 0 1 1 1 1 0 0 1 0 0 13 0 1416.7613 Q96TA2 Q96TA2 225 237 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.00026129 176.32 By MS/MS By matching 7.4 1.5 2 1 1 1 4 1 11972000 11908000 64532 7842 2263 8120 19541;19542;19543;19544;19545 13785;13786;13787 13785 3 312440 197910 LAETVFNFQEK ALVWESYKLDPYVQRLAETVFNFQEKVDDL YVQRLAETVFNFQEKVDDLLIIEEKIDLEV R L A E K V 1 0 1 0 0 1 2 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 11 0 1324.6663 Q14204 Q14204 836 846 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.3154E-10 218.6 By MS/MS 2 0.816 1 1 1 3 1396200 1396200 0 7843 1421 8121 19546;19547;19548 13788;13789 13788 2 63631 0 LAEVGQYEQVK IATWKSLDLIESLLRLAEVGQYEQVKQLFS SLLRLAEVGQYEQVKQLFSFPIKHCPDMLV R L A V K Q 1 0 0 0 0 2 2 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 11 0 1262.6507 A5YKK6 A5YKK6 460 470 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 2.1854E-05 173.64 By MS/MS 2.5 0.5 1 1 2 1460900 1460900 0 7844 19 8122 19549;19550 13790;13791 13790 2 60123 0 LAEVIQK WSAHPGVVRAQHLTRLAEVIQKHQRLLWTL VRAQHLTRLAEVIQKHQRLLWTLESLVTGR R L A Q K H 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 799.48035 Q8IZ83 Q8IZ83 108 114 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 2 0.042356 106.42 By MS/MS 5 0 1 1 697810 697810 0 7845 1886 8123 19551 13792 13792 1 28683 0 LAEYYGLYR RAEWERTCGPYHKQRLAEYYGLYRDLFHGA PYHKQRLAEYYGLYRDLFHGATFVPRVPLH R L A Y R D 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 3 0 0 0 9 0 1146.571 Q96DV4 Q96DV4 151 159 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.0021045 128.69 By MS/MS 7 0 1 1 4637400 4637400 0 7846 2155 8124 19552 13793 13793 1 82871 0 LAFNSLLEK SSTKRSTTLDAGNIKLAFNSLLEKAEARER DAGNIKLAFNSLLEKAEAREREREKEEARK K L A E K A 1 0 1 0 0 0 1 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 9 0 1033.5808 O75400 O75400 719 727 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 2 0.010364 104.01 By MS/MS 3.5 0.5 1 1 2 595590 595590 0 7847 305 8125 19553;19554 13794 13794 1 15929 0 LAFQQKPPPPPK KSIIKEPESAAEAVKLAFQQKPPPPPKKIY AVKLAFQQKPPPPPKKIYNYLDKYVVGQSF K L A P K K 1 0 0 0 0 2 0 0 0 0 1 2 0 1 5 0 0 0 0 0 0 0 12 1 1346.7711 O76031 O76031 159 170 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2;3 0.0038466 152.11 By MS/MS 5.2 0.748 1 2 2 5 12428000 12428000 0 7848 344 8126 19555;19556;19557;19558;19559 13795;13796;13797 13797 3 234440 0 LAFSSTAR YEAKYLSGIAHFLEKLAFSSTARFDSKDEI IAHFLEKLAFSSTARFDSKDEILLTLEKHG K L A A R F 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 2 1 0 0 0 0 0 8 0 851.45012 Q10713 Q10713 115 122 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 2 0.019122 107.9 By MS/MS 6 0 1 1 3597400 3597400 0 7849 1301 8127 19560 13798 13798 1 28053 0 LAGANPAVITCDELLLGHEK KNWYPRQKICYAKRKLAGANPAVITCDELL PAVITCDELLLGHEKAPAFRDYVAVARGSK K L A E K A 3 0 1 1 1 0 2 2 1 1 4 1 0 0 1 0 1 0 0 1 0 0 20 0 2120.0936 P78527 P78527 4051 4070 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0015929 83.423 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 3154800 3154800 0 7850 1197 8128 19561;19562;19563;19564;19565;19566 13799;13800 13800 2 86169 0 LAGAPALAPEPPLIPK SYGVVQLFDQPHPQRLAGAPALAPEPPLIP AGAPALAPEPPLIPKLLVQTIQETTGREDF R L A P K L 4 0 0 0 0 0 1 1 0 1 3 1 0 0 5 0 0 0 0 0 0 0 16 0 1553.9181 Q562E7 Q562E7 592 607 WDR81 WD repeat-containing protein 81 yes yes 2 0.010614 91.937 By MS/MS 2.5 0.5 1 1 2 256610 256610 0 7851 1592 8129 19567;19568 13801 13801 1 11061 0 LAGAQLSWLYK VLKATGRQILTLRVRLAGAQLSWLYKEATV LRVRLAGAQLSWLYKEATVQEVDVIPEDGA R L A Y K E 2 0 0 0 0 1 0 1 0 0 3 1 0 0 0 1 0 1 1 0 0 0 11 0 1248.6867 O43824 O43824 470 480 GTPBP6 Putative GTP-binding protein 6 yes yes 2 0.00027667 151.83 By MS/MS 6 0 1 1 1571700 1571700 0 7852 228 8130 19569 13802 13802 1 12256 0 LAGATLLIFANK QDCQRELQSLLVEERLAGATLLIFANKQDL EERLAGATLLIFANKQDLPGALSSNAIREV R L A N K Q 3 0 1 0 0 0 0 1 0 1 3 1 0 1 0 0 1 0 0 0 0 0 12 0 1230.7336 P36404 P36404 115 126 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 1.3981E-07 191.45 By MS/MS 9.5 0.5 1 1 2 66270 66270 0 7853 802 8131 19570;19571 13803;13804 13803 2 45243 0 LAGCTVFITGASR ______________________________ GRLAGCTVFITGASRGIGKAIALKAAKDGA R L A S R G 2 1 0 0 1 0 0 2 0 1 1 0 0 1 0 1 2 0 0 1 0 0 13 0 1351.6918 Q6YN16 Q6YN16 8 20 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 2 0.00031862 142.08 By MS/MS 7 0 1 1 2010600 2010600 0 7854 1738 8132 19572 13805 13805 1 35930 0 LAGDHIEYYK LPEIQKFSSRIREAKLAGDHIEYYKASSEM IREAKLAGDHIEYYKASSEMALYQKKHGIK K L A Y K A 1 0 0 1 0 0 1 1 1 1 1 1 0 0 0 0 0 0 2 0 0 0 10 0 1207.5873 Q15070 Q15070 188 197 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.001831 117.81 By MS/MS 7 0 1 1 24095000 24095000 0 7855 1477 8133 19573 13806 13806 1 430590 0 LAGDPSAGDGAAPR GGEGLRAELRAAGLRLAGDPSAGDGAAPRV RLAGDPSAGDGAAPRVRAVLVGYDEHFSFA R L A P R V 4 1 0 2 0 0 0 3 0 0 1 0 0 0 2 1 0 0 0 0 0 0 14 0 1253.6 Q96GD0 Q96GD0 129 142 PDXP Pyridoxal phosphate phosphatase yes yes 2 0.0024507 114.86 By MS/MS 8 0 1 1 905340 905340 0 7856 2181 8134 19574 13807 13807 1 59725 0 LAGESESNLR GAFFFLINGPEIMSKLAGESESNLRKAFEE EIMSKLAGESESNLRKAFEEAEKNAPAIIF K L A L R K 1 1 1 0 0 0 2 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1074.5306 P55072 P55072 278 287 VCP Transitional endoplasmic reticulum ATPase yes yes 2 4.924E-11 210.6 By MS/MS 5.5 1.5 1 1 2 13684000 13684000 0 7857 1026 8135 19575;19576 13808;13809 13808 2 362980 0 LAGESESNLRK GAFFFLINGPEIMSKLAGESESNLRKAFEE IMSKLAGESESNLRKAFEEAEKNAPAIIFI K L A R K A 1 1 1 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 11 1 1202.6255 P55072 P55072 278 288 VCP Transitional endoplasmic reticulum ATPase yes yes 2 2.8998E-06 182.39 By MS/MS By matching 4.33 0.471 2 1 2 1 3817000 3793800 23210 7858 1026 8136 19577;19578;19579 13810 13810 1 110250 48499 LAGFLDLTEQEFR IRSFLKLYTTMPVAKLAGFLDLTEQEFRIQ AKLAGFLDLTEQEFRIQLLVFKHKMKNLVW K L A F R I 1 1 0 1 0 1 2 1 0 0 3 0 0 2 0 0 1 0 0 0 0 0 13 0 1537.7777 Q9Y262 Q9Y262 475 487 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 4.525E-35 265.36 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 17311000 17311000 0 7859 2868 8137 19580;19581;19582;19583;19584;19585 13811;13812;13813;13814 13813 4 190190 0 LAGGDWFTSR SPSDLEAHFVPLVKRLAGGDWFTSRTSACG PLVKRLAGGDWFTSRTSACGLFSVCYPRVS R L A S R T 1 1 0 1 0 0 0 2 0 0 1 0 0 1 0 1 1 1 0 0 0 0 10 0 1108.5302 P30153 P30153 135 144 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 0.010811 96.665 By MS/MS 6.5 1.12 1 1 1 1 4 18130000 18130000 0 7860 737 8138 19586;19587;19588;19589 13815 13815 1 375660 0 LAGLDITDATLR GQDNRSKLRNMTDFRLAGLDITDATLRLII DFRLAGLDITDATLRLIIRHMPLLSRLDLS R L A L R L 2 1 0 2 0 0 0 1 0 1 3 0 0 0 0 0 2 0 0 0 0 0 12 0 1257.6929 Q9Y2K7 Q9Y2K7 1046 1057 KDM2A Lysine-specific demethylase 2A yes yes 2 0.0035131 107.55 By MS/MS 3 0 1 1 0 0 0 7861 2891 8139 19590 13816 13816 1 0 0 LAGLFNEQR RTLGGLEMELRLRERLAGLFNEQRKGQRAK LRLRERLAGLFNEQRKGQRAKDVRENPRAM R L A Q R K 1 1 1 0 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1046.5509 Q9Y4L1 Q9Y4L1 283 291 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.00015207 167.23 By MS/MS 4 0.816 1 1 1 3 2601800 2601800 0 7862 2955 8140 19591;19592;19593 13817 13817 1 70560 0 LAGLHDAILR GNISASPEEVYAVAKLAGLHDAILRMPHGY YAVAKLAGLHDAILRMPHGYDTQVGERGLK K L A L R M 2 1 0 1 0 0 0 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0 10 0 1077.6295 O75027 O75027 584 593 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.00088136 128.36 By MS/MS 1 0 1 1 214070 214070 0 7863 276 8141 19594 13818 13818 1 10459 0 LAGLSAALLR GPAPGPAQLRCYAGRLAGLSAALLRTDSFV CYAGRLAGLSAALLRTDSFVGGRWLPAAAT R L A L R T 3 1 0 0 0 0 0 1 0 0 4 0 0 0 0 1 0 0 0 0 0 0 10 0 983.61277 P51649 P51649 51 60 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 2 1.2189E-15 219.56 By MS/MS 6.5 0.5 1 1 2 2257400 2257400 0 7864 973 8142 19595;19596 13819 13819 1 21205 0 LAGNTLGSR SDSPWFLSGSETLGRLAGNTLGSRWSSGVG SETLGRLAGNTLGSRWSSGVGGSGGGSSGR R L A S R W 1 1 1 0 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 887.48248 O95071 O95071 123 131 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0023314 126.24 By MS/MS 2.5 1.12 1 1 1 1 4 3985900 3985900 0 7865 364 8143 19597;19598;19599;19600 13820 13820 1 164470 0 LAGPQLVQMFIGDGAK LARACAAQTKATFLKLAGPQLVQMFIGDGA AGPQLVQMFIGDGAKLVRDAFALAKEKAPS K L A A K L 2 0 0 1 0 2 0 3 0 1 2 1 1 1 1 0 0 0 0 1 0 0 16 0 1643.8705 P17980 P17980 251 266 PSMC3 26S protease regulatory subunit 6A yes yes 2 2.6626E-07 158.01 By MS/MS 6 0 1 1 2748300 2748300 0 7866 618 8144 19601 13821 13821 1 21432 0 LAGPVPAR PRDALPRLLPALAARLAGPVPARRPPEACE LPALAARLAGPVPARRPPEACEELRLALVQ R L A A R R 2 1 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 8 0 779.46537 Q86Y56 Q86Y56 125 132 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.042818 94.163 By MS/MS 4.5 0.5 1 1 2 1903000 1903000 0 7867 1844 8145 19602;19603 13822 13822 1 64217 0 LAGSLVTQAPISAR GDFLRSRFCKDVLPKLAGSLVTQAPISARA KLAGSLVTQAPISARAGPVYSHTLAFKLQL K L A A R A 3 1 0 0 0 1 0 1 0 1 2 0 0 0 1 2 1 0 0 1 0 0 14 0 1382.7882 O43156 O43156 956 969 TTI1 TELO2-interacting protein 1 homolog yes yes 2 1.0034E-08 193.62 By MS/MS 3.5 0.5 1 1 2 2271500 2271500 0 7868 183 8146 19604;19605 13823 13823 1 61827 0 LAGTQPLEVLEAVQR NQYLTDPKFVERTLRLAGTQPLEVLEAVQR LAGTQPLEVLEAVQRSLVLQRPQTWADCVT R L A Q R S 2 1 0 0 0 2 2 1 0 0 3 0 0 0 1 0 1 0 0 2 0 0 15 0 1622.8992 P22314 P22314 679 693 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2;3 7.7999E-07 168.82 By MS/MS 4.33 0.471 2 1 3 3782900 3782900 0 7869 658 8147 19606;19607;19608 13824;13825 13825 2 104760 0 LAGVELAETGK IASLRKEPRGALLVKLAGVELAETGKAWLQ LLVKLAGVELAETGKAWLQKELKPSQLLWF K L A G K A 2 0 0 0 0 0 2 2 0 0 2 1 0 0 0 0 1 0 0 1 0 0 11 0 1086.5921 Q6P1S2 Q6P1S2 118 128 C3orf33 Protein C3orf33 yes yes 2 0.0066513 101.38 By MS/MS 8 0 1 1 1137400 1137400 0 7870 1705 8148 19609 13826 13826 1 75036 0 LAHGFEILCSK PPSDPQYRAHELGMKLAHGFEILCSKCSPH LGMKLAHGFEILCSKCSPHFSDCKKSLVTA K L A S K C 1 0 0 0 1 0 1 1 1 1 2 1 0 1 0 1 0 0 0 0 0 0 11 0 1273.6489 O95905 O95905 304 314 ECD Protein SGT1 yes yes 2 0.00095109 147.4 By MS/MS 5.5 0.5 1 1 2 1541500 1541500 0 7871 415 8149 19610;19611 13827 13827 1 40592 0 LAHGLLEELK QQTVRKLLSSLGGFKLAHGLLEELKTVLSS LGGFKLAHGLLEELKTVLSSHKVLPLEALV K L A L K T 1 0 0 0 0 0 2 1 1 0 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1121.6445 Q92616 Q92616 600 609 GCN1L1 Translational activator GCN1 yes yes 2 0.028945 86.136 By MS/MS 3.5 0.5 1 1 2 667380 667380 0 7872 2068 8150 19612;19613 13828 13828 1 17556 0 LAHISTDPR GVLDQREYLTTLGQRLAHISTDPRLAKAIV TTLGQRLAHISTDPRLAKAIVLAAIFRCLH R L A P R L 1 1 0 1 0 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 9 0 1008.5352 Q7L2E3 Q7L2E3 874 882 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 3 0.032161 66.962 By MS/MS By matching 3.75 0.829 2 1 1 3 1 3062700 3056900 5821.3 7873 1763 8151 19614;19615;19616;19617 13829 13829 1 83579 8343.1 LAHLGVQVK ATSFLLALEPELEARLAHLGVQVKGEDEEE PELEARLAHLGVQVKGEDEEENNLEVRETK R L A V K G 1 0 0 0 0 1 0 1 1 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 963.58655 P04843 P04843 81 89 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.016066 91.318 By MS/MS 5 0 1 1 1048500 1048500 0 7874 458 8152 19618 13830 13830 1 43096 0 LAIKLPDDQIPK LRGRSFAGNLNTYKRLAIKLPDDQIPKTNC YKRLAIKLPDDQIPKTNCNVAVINVGAPAA R L A P K T 1 0 0 2 0 1 0 0 0 2 2 2 0 0 2 0 0 0 0 0 0 0 12 1 1349.7919 Q01813 Q01813 397 408 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 3 0.0081144 88.338 By MS/MS 4.5 0.5 1 1 2 1020600 1020600 0 7875 1246 8153 19619;19620 13831 13831 1 40550 0 LAILQVGNR QVTQLKEQVPGFTPRLAILQVGNRDDSNLY PGFTPRLAILQVGNRDDSNLYINVKLKAAE R L A N R D 1 1 1 0 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 982.59236 P11586 P11586 38 46 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 3.1587E-11 217.21 By MS/MS 4 0 1 1 1932300 1932300 0 7876 556 8154 19621 13832 13832 1 52748 0 LAIWDTAGQER DFKVKTISVDGNKAKLAIWDTAGQERFRTL NKAKLAIWDTAGQERFRTLTPSYYRGAQGV K L A E R F 2 1 0 1 0 1 1 1 0 1 1 0 0 0 0 0 1 1 0 0 0 0 11 0 1258.6306 Q9NP72 Q9NP72 59 69 RAB18 Ras-related protein Rab-18 yes yes 2 6.8047E-05 166.66 By MS/MS 9 0 1 1 929130 929130 0 7877 2573 8155 19622 13833 13833 1 533240 0 LAIYGMLPK TAAQLHLRDPVAIVKLAIYGMLPKNLHRRT PVAIVKLAIYGMLPKNLHRRTMMERLHLFP K L A P K N 1 0 0 0 0 0 0 1 0 1 2 1 1 0 1 0 0 0 1 0 0 0 9 0 1004.5729 Q9BYD1 Q9BYD1 106 114 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.0039022 114.19 By MS/MS 9 0 1 1 788650 788650 0 7878 2412 8156 19623 13834 13834 1487 1 452610 0 LAKADGIVSK GAIRRMGESDDSILRLAKADGIVSKNF___ DSILRLAKADGIVSKNF_____________ R L A S K N 2 0 0 1 0 0 0 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1000.5917 P63220 P63220 72 81 RPS21 40S ribosomal protein S21 yes yes 3 0.003266 101.3 By MS/MS By MS/MS 10 0 2 1 1 622670 622670 0 7879 1176 8157 19624;19625 13835;13836 13836 2 661830 0 LAKENAPAIIFIDEIDAIATK KYLGEGPRMVRDVFRLAKENAPAIIFIDEI PAIIFIDEIDAIATKRFDAQTGADREVQRI R L A T K R 5 0 1 2 0 0 2 0 0 5 1 2 0 1 1 0 1 0 0 0 0 0 21 1 2255.2413 P43686 P43686 253 273 PSMC4 26S protease regulatory subunit 6B yes yes 2;3 0.019693 84.842 By MS/MS 6 0 2 2 1393000 1393000 0 7880 867 8158 19626;19627 13837;13838 13837 2 10863 0 LAKENAPAIIFIDEIDAIATKR KYLGEGPRMVRDVFRLAKENAPAIIFIDEI AIIFIDEIDAIATKRFDAQTGADREVQRIL R L A K R F 5 1 1 2 0 0 2 0 0 5 1 2 0 1 1 0 1 0 0 0 0 0 22 2 2411.3424 P43686 P43686 253 274 PSMC4 26S protease regulatory subunit 6B yes yes 4 0.037771 44.441 By MS/MS 6 0 1 1 263830 263830 0 7881 867 8159 19628 13839 13839 1 2057.3 0 LALAAQECER ELSPSSPMDAWILSRLALAAQECERGFLTR WILSRLALAAQECERGFLTRELSLVTHALH R L A E R G 3 1 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1159.5656 Q5ST30 Q5ST30 786 795 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.00024755 154.85 By MS/MS 4 0 1 1 2980500 2980500 0 7882 1619 8160 19629 13840 13840 1 81363 0 LALASLGYEK KDAFDKGSLFGGSVKLALASLGYEKSCVLF GGSVKLALASLGYEKSCVLFNCAALASQIA K L A E K S 2 0 0 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 1 0 0 0 10 0 1063.5914 Q8WUM4 Q8WUM4 111 120 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.00087616 128.6 By MS/MS 5 0.816 1 1 1 3 2307600 2307600 0 7883 2019 8161 19630;19631;19632 13841 13841 1 47351 0 LALDLEIATYR LARLLRDYQELMNTKLALDLEIATYRTLLE MNTKLALDLEIATYRTLLEGEESRMSGECA K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1276.7027 P04264;CON__P04264 P04264 473 483 KRT1 Keratin, type II cytoskeletal 1 no no 2 5.6727E-07 185.6 By MS/MS By MS/MS 6 3.1 1 1 1 1 1 1 1 2 2 2 9 957110 96520 860600 + 7884 450;45 8162 19633;19634;19635;19636;19637;19638;19639;19640;19641;19642;19643 13842;13843;13844;13845;13846;13847;13848;13849;13850 13849 9 82627 6270300 LALEGVEKER ETQVIQLNEQVHSLKLALEGVEKERDFYFG VHSLKLALEGVEKERDFYFGKLREIELLCQ K L A E R D 1 1 0 0 0 0 3 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 1 1142.6295 Q15555 Q15555 256 265 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.037495 107.21 By MS/MS 7.5 0.5 1 1 2 4292600 4292600 0 7885 1508 8163 19644;19645 13851 13851 1 91204 0 LALEQQQLICK SFLFGGEFYSYYKCKLALEQQQLICKQQTP YKCKLALEQQQLICKQQTPELEPAATMPPL K L A C K Q 1 0 0 0 1 3 1 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1342.7279 Q8IWX8 Q8IWX8 60 70 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 2 8.6437E-05 163.88 By MS/MS 4 0 1 1 1900000 1900000 0 7886 1867 8164 19646 13852 13852 1 51868 0 LALFNPDVCWDR FIGTGATGATLYLLRLALFNPDVCWDRNNP LLRLALFNPDVCWDRNNPEPWNKLGPNDQY R L A D R N 1 1 1 2 1 0 0 0 0 0 2 0 0 1 1 0 0 1 0 1 0 0 12 0 1504.7133 O00483 O00483 36 47 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.0013897 128.88 By MS/MS 10 0 1 1 1653800 1653800 0 7887 99 8165 19647 13853;13854 13854 2 1757800 0 LALGSFVEEYNNK VYAMNWSVRPDKRFRLALGSFVEEYNNKVQ FRLALGSFVEEYNNKVQLVGLDEESSEFIC R L A N K V 1 0 2 0 0 0 2 1 0 0 2 1 0 1 0 1 0 0 1 1 0 0 13 0 1482.7355 P61962 P61962 34 46 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 2 1.134E-11 240.1 By MS/MS 7.5 0.5 1 1 2 1742400 1742400 0 7888 1108 8166 19648;19649 13855 13855 1 71075 0 LALKYHPDKNPNEGEK KPNATQEELKKAYRKLALKYHPDKNPNEGE ALKYHPDKNPNEGEKFKQISQAYEVLSDAK K L A E K F 1 0 2 1 0 0 2 1 1 0 2 3 0 0 2 0 0 0 1 0 0 0 16 2 1851.9479 P31689 P31689 29 44 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 4 0.051876 53.828 By MS/MS 6 0 1 1 2494300 2494300 0 7889 755 8167 19650 13856 13856 1 19450 0 LALLHEGTGPR FVLSDEFSHLRPEQRLALLHEGTGPRVISA PEQRLALLHEGTGPRVISAFVEIIFDNSDN R L A P R V 1 1 0 0 0 0 1 2 1 0 3 0 0 0 1 0 1 0 0 0 0 0 11 0 1162.6459 Q9UQE7 Q9UQE7 62 72 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0024895 130.98 By MS/MS 3 0 1 1 1888000 1888000 0 7890 2860 8168 19651 13857 13857 1 49286 0 LALLQVR GIFETKFLSQIESDRLALLQVRAILQQLGL LSQIESDRLALLQVRAILQQLGLNSTCDDS R L A V R A 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 811.52797 P19367;Q2TB90 P19367 795 801 HK1;HKDC1 Hexokinase-1;Putative hexokinase HKDC1 yes no 2 0.046887 103.28 By MS/MS 4 0 1 1 749510 749510 0 7891 630 8169 19652 13858 13858 1 20461 0 LALQLHPDRNPDDPQAQEK PRSASIKDIKKAYRKLALQLHPDRNPDDPQ LHPDRNPDDPQAQEKFQDLGAAYEVLSDSE K L A E K F 2 1 1 3 0 3 1 0 1 0 3 1 0 0 3 0 0 0 0 0 0 0 19 1 2184.0923 Q9UBS4 Q9UBS4 48 66 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 3;4 0.0042732 78.78 By MS/MS 7 0 2 2 18925000 18925000 0 7892 2756 8170 19653;19654 13859;13860 13860 2 338200 0 LALSQAHSLVQAEAPR ALWEEQVLQKEKKDRLALSQAHSLVQAEAP ALSQAHSLVQAEAPR_______________ R L A P R - 4 1 0 0 0 2 1 0 1 0 3 0 0 0 1 2 0 0 0 1 0 0 16 0 1689.9162 Q9BSF4 Q9BSF4 245 260 C19orf52 Uncharacterized protein C19orf52 yes yes 2 9.4067E-39 262.48 By MS/MS 8.5 0.5 1 1 2 2996500 2996500 0 7893 2336 8171 19655;19656 13861 13861 1 234010 0 LALVISELEGK GREKFKSRGVGELARLALVISELEGKAQQP ELARLALVISELEGKAQQPAAELMQDTRDF R L A G K A 1 0 0 0 0 0 2 1 0 1 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1170.686 Q12899 Q12899 235 245 TRIM26 Tripartite motif-containing protein 26 yes yes 2 3.418E-07 195.79 By MS/MS 5 0 1 1 1170900 1170900 0 7894 1312 8172 19657 13862 13862 1 48127 0 LALVNNLQIVDSK EPRFRDEFVIPHLHKLALVNNLQIVDSKRL HKLALVNNLQIVDSKRLDIATHLFEAYSAL K L A S K R 1 0 2 1 0 1 0 0 0 1 3 1 0 0 0 1 0 0 0 2 0 0 13 0 1425.8191 Q9P260 Q9P260 1093 1105 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 2 0.00015221 151.98 By MS/MS 3 0 1 1 481120 481120 0 7895 2735 8173 19658 13863 13863 1 12560 0 LALVTGGEIASTFDHPELVK GVMAIEHADFAGVERLALVTGGEIASTFDH GGEIASTFDHPELVKLGSCKLIEEVMIGED R L A V K L 2 0 0 1 0 0 2 2 1 1 3 1 0 1 1 1 2 0 0 2 0 0 20 0 2096.1154 P78371 P78371 323 342 CCT2 T-complex protein 1 subunit beta yes yes 2;3 3.7848E-13 206.45 By MS/MS 6 0 2 2 81986000 81986000 0 7896 1195 8174 19659;19660 13864;13865;13866 13865 3 639330 0 LALYNLLAYVK DTIGQQLEFLTTKSRLALYNLLAYVKHLKG TKSRLALYNLLAYVKHLKGQNKDALECLEQ R L A V K H 2 0 1 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 2 1 0 0 11 0 1279.754 Q13325 Q13325 51 61 IFIT5 Interferon-induced protein with tetratricopeptide repeats 5 yes yes 2 0.0011814 131.22 By MS/MS 6 0 1 1 141370 141370 0 7897 1356 8175 19661 13867 13867 1 1102.4 0 LALYQTAIESAR PEAPHPGLETTLQERLALYQTAIESARQAG QERLALYQTAIESARQAGDSAKMRRYDRGL R L A A R Q 3 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 12 0 1334.7194 Q6P1N0 Q6P1N0 144 155 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 3.9128E-07 183.99 By MS/MS 4 0 1 1 1183900 1183900 0 7898 1702 8176 19662 13868 13868 1 32320 0 LAMILYDIPDIR AQDRIGWAFGLGLERLAMILYDIPDIRLFW LERLAMILYDIPDIRLFWCEDERFLKQFCV R L A I R L 1 1 0 2 0 0 0 0 0 3 2 0 1 0 1 0 0 0 1 0 0 0 12 0 1431.7796 O95363 O95363 319 330 FARS2 Phenylalanine--tRNA ligase, mitochondrial yes yes 2 0.0012509 123.88 By MS/MS 7 0 1 1 148800 148800 0 7899 386 8177 19663 13869 13869 205 1 2659.1 0 LAMLEEDLLALK VYRAGIATHFVDSEKLAMLEEDLLALKSPS SEKLAMLEEDLLALKSPSKENIASVLENYH K L A L K S 2 0 0 1 0 0 2 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 12 0 1357.7527 Q6NVY1 Q6NVY1 222 233 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 0.0022838 114.4 By MS/MS 7.5 0.5 1 1 2 352950 352950 0 7900 1693 8178 19664;19665 13870;13871;13872 13870 1213 3 9372.8 0 LAMNMLNR L A N R 1 1 2 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 8 0 961.48374 REV__Q7L099 yes yes 2 0.0356 67.035 By MS/MS 6 0 2 2 3075900 3075900 0 + 7901 3034 8179 19666;19667 13873 13873 1746;1747 1 23986 0 LANEERDAENPDEPKEGVNR AKWIFKQDFSPEVLKLANEERDAENPDEPK RDAENPDEPKEGVNRSFLEVSEMEMDLGAI K L A N R S 2 2 3 2 0 0 5 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 20 2 2281.0571 Q9H2M9 Q9H2M9 958 977 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 4 0.054017 44.587 By MS/MS 3.5 0.5 1 1 2 2171000 2171000 0 7902 2481 8180 19668;19669 13874 13874 1 56957 0 LANIDEEMLQK AYLLYAFTRIRSIARLANIDEEMLQKAARE SIARLANIDEEMLQKAARETKILLDHEKEW R L A Q K A 1 0 1 1 0 1 2 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 11 0 1302.649 P54136 P54136 547 557 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 4.7521E-05 169.76 By MS/MS By matching 5.25 0.433 3 1 3 1 4719600 4695000 24645 7903 1013 8181;8182 19670;19671;19672;19673 13875;13876 13876 783 2 178960 72926 LANILFTQELAR GEKFYNAGLAYCHSKLANILFTQELARRLK HSKLANILFTQELARRLKGSGVTTYSVHPG K L A A R R 2 1 1 0 0 1 1 0 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1387.7823 Q8TC12 Q8TC12 207 218 RDH11 Retinol dehydrogenase 11 yes yes 2 8.2743E-05 192.44 By MS/MS 9 0.816 1 1 1 3 6787600 6787600 0 7904 1992 8183 19674;19675;19676 13877 13877 1 531140 0 LANILFTR SEQSYNKSFCYSRSKLANILFTRELARRLE FCYSRSKLANILFTRELARRLEGTNVTVNV K L A T R E 1 1 1 0 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 8 0 946.56 Q9HBH5 Q9HBH5 222 229 RDH14 Retinol dehydrogenase 14 yes yes 2 0.0053417 135.83 By MS/MS 7.5 0.5 1 1 2 1298800 1298800 0 7905 2552 8184 19677;19678 13878 13878 1 83648 0 LANLINAEER KKGCKRYWTKTIEKKLANLINAEERRDVSL TIEKKLANLINAEERRDVSLKDCMRRLFYN K L A E R R 2 1 2 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1141.6091 P52701 P52701 1015 1024 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.00024223 155.06 By MS/MS 3.5 0.5 1 1 2 1821000 1821000 0 7906 989 8185 19679;19680 13879 13879 1 47721 0 LANLPEEVIQK IKGACPKSYGFNAARLANLPEEVIQKGHRK NAARLANLPEEVIQKGHRKAREFEKMNQSL R L A Q K G 1 0 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1252.7027 P52701 P52701 1305 1315 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.0015953 125.68 By MS/MS 4 0.816 1 1 1 3 3399500 3399500 0 7907 989 8186 19681;19682;19683 13880 13880 1 92337 0 LANQAADYFGDAFK LKATRDKMKDAIIAKLANQAADYFGDAFKQ KLANQAADYFGDAFKQCQYKDTLPKEVFPV K L A F K Q 4 0 1 2 0 1 0 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 14 0 1529.7151 Q8WUM4 Q8WUM4 216 229 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 2.3158E-12 208.08 By MS/MS 4 0 1 1 1295000 1295000 0 7908 2019 8187 19684 13881 13881 1 35351 0 LANRAPEPTPQQVAQQQ VAVRLQMSERNILSRLANRAPEPTPQQVAQ NRAPEPTPQQVAQQQ_______________ R L A Q Q - 3 1 1 0 0 5 1 0 0 0 1 0 0 0 3 0 1 0 0 1 0 0 17 1 1874.9599 Q14839 Q14839 1896 1912 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 6.7667E-10 170.95 By MS/MS 2.5 1.12 1 1 1 1 4 1718000 1718000 0 7909 1449 8188 19685;19686;19687;19688 13882;13883 13883 2 76372 0 LANVLFAR VVGWRQELRAYADTKLANVLFARELANQLE RAYADTKLANVLFARELANQLEATGVTCYA K L A A R E 2 1 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 902.53379 Q6UX07 Q6UX07 202 209 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 0.0019165 158.12 By MS/MS 7 0 1 1 1422000 1422000 0 7910 1732 8189 19689 13884 13884 1 25411 0 LAPDYDALDVANK NTLIRPDGEKKAYVRLAPDYDALDVANKIG VRLAPDYDALDVANKIGII___________ R L A N K I 3 0 1 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 13 0 1403.6933 P62750 P62750 140 152 RPL23A 60S ribosomal protein L23a yes yes 2 0.0068433 99.539 By MS/MS By matching 9 0 2 1 1 4134700 3842800 291900 7911 1142 8190 19690;19691 13885 13885 1 2205400 3145900 LAPEYEAAATR MLVEFFAPWCGHCKRLAPEYEAAATRLKGI HCKRLAPEYEAAATRLKGIVPLAKVDCTAN R L A T R L 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 11 0 1190.5932 P30101 P30101 63 73 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.0015187 126.71 By MS/MS By matching 6 0 2 1 1 10570000 10518000 52673 7912 736 8191 19692;19693 13886 13886 1 82016 161540 LAPITSDPTEATAVGAVEASFK EAAIYHLQLFEELRRLAPITSDPTEATAVG PTEATAVGAVEASFKCCSGAIIVLTKSGRS R L A F K C 5 0 0 1 0 0 2 1 0 1 1 1 0 1 2 2 3 0 0 2 0 0 22 0 2174.1107 P14618 P14618 401 422 PKM Pyruvate kinase PKM yes yes 2;3 8.9423E-10 153.72 By MS/MS 6 0 2 2 24651000 24651000 0 7913 588 8192 19694;19695 13887;13888 13887 2 192230 0 LAPITYPQGLAMAR LRDDKDTIERLRDKKLAPITYPQGLAMARE KLAPITYPQGLAMAREIGSVKYLECSALTQ K L A A R E 3 1 0 0 0 1 0 1 0 1 2 0 1 0 2 0 1 0 1 0 0 0 14 0 1500.8123 P60763 P60763 134 147 RAC3 Ras-related C3 botulinum toxin substrate 3 yes yes 2 7.0872E-05 147.62 By MS/MS 9.5 0.5 1 1 2 610420 610420 0 7914 1073 8193 19696;19697 13889 13889 839 1 376620 0 LAPLLLGNPQPMVM FKFKQLKMPVRALLRLAPLLLGNPQPMVM_ RLAPLLLGNPQPMVM_______________ R L A V M - 1 0 1 0 0 1 0 1 0 0 4 0 2 0 3 0 0 0 0 1 0 0 14 0 1492.8146 Q9H1A4 Q9H1A4 1931 1944 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0011148 105.52 By MS/MS 2 0.816 1 1 1 3 257840 257840 0 7915 2463 8194 19698;19699;19700 13890 13890 1506;1507 1 11633 0 LAPSPARPR RSRRAVSVPASFFRRLAPSPARPRHPAEAP ASFFRRLAPSPARPRHPAEAPNNGARLSSE R L A P R H 2 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 9 1 963.5614 O14654 O14654 436 444 IRS4 Insulin receptor substrate 4 yes yes 2 0.050151 111.82 By MS/MS 3 0 1 1 126930 126930 0 7916 118 8195 19701 13891 13891 1 3313.5 0 LAPVYLSNR WGQNEAADAMSRLARLAPVYLSNRGFSIGI MSRLARLAPVYLSNRGFSIGIGDVTPGQGL R L A N R G 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 9 0 1031.5764 O14802 O14802 686 694 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.0089921 107.01 By MS/MS 2.5 1.12 1 1 1 1 4 1885900 1885900 0 7917 128 8196 19702;19703;19704;19705 13892 13892 1 53775 0 LAQAAQSSVATITR DTKVLVQNAAGSQEKLAQAAQSSVATITRL KLAQAAQSSVATITRLADVVKLGAASLGAE K L A T R L 4 1 0 0 0 2 0 0 0 1 1 0 0 0 0 2 2 0 0 1 0 0 14 0 1415.7732 Q9Y490 Q9Y490 2044 2057 TLN1 Talin-1 yes yes 2 1.8078E-35 265.75 By MS/MS 2.5 1.12 1 1 1 1 4 6025600 6025600 0 7918 2947 8197 19706;19707;19708;19709 13893 13893 1 253380 0 LAQAHPAGPPTLDPVNDLQLK PPLAAVTTAVQELLRLAQAHPAGPPTLDPV AGPPTLDPVNDLQLKDMSVVEGGLRARKLE R L A L K D 3 0 1 2 0 2 0 1 1 0 4 1 0 0 4 0 1 0 0 1 0 0 21 0 2194.1746 Q15477 Q15477 971 991 SKIV2L Helicase SKI2W yes yes 3 0.0016292 80.994 By MS/MS 3 0 1 1 748080 748080 0 7919 1506 8198 19710 13894 13894 1 19529 0 LAQALLEQGGR CGPITSTTRFIFEKKLAQALLEQGGRLSSF FEKKLAQALLEQGGRLSSFYHHEAGVTALS K L A G R L 2 1 0 0 0 2 1 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1154.6408 Q86XL3 Q86XL3 106 116 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.00078789 136.49 By MS/MS 4 0 1 1 2741400 2741400 0 7920 1841 8199 19711 13895 13895 1 74837 0 LAQATQER KFNSVKEKEERGIARLAQATQERTDLYAKQ EERGIARLAQATQERTDLYAKQGRGSQFTS R L A E R T 2 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 915.47739 Q9UQE7 Q9UQE7 365 372 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00053702 182.53 By MS/MS 2.5 1.12 1 1 1 1 4 2341500 2341500 0 7921 2860 8200 19712;19713;19714;19715 13896;13897 13897 2 66346 0 LAQDGAHVVVSSR VTASTDGIGFAIARRLAQDGAHVVVSSRKQ RRLAQDGAHVVVSSRKQQNVDQAVATLQGE R L A S R K 2 1 0 1 0 1 0 1 1 0 1 0 0 0 0 2 0 0 0 3 0 0 13 0 1337.7052 Q9BTZ2 Q9BTZ2 52 64 DHRS4 Dehydrogenase/reductase SDR family member 4 yes yes 2;3 0.0015881 124.12 By MS/MS 8 0 2 2 3396900 3396900 0 7922 2358 8201 19716;19717 13898;13899 13899 2 224100 0 LAQEEAQHR LEEKGVQLDSAGLERLAQEEAQHRARQAEP SAGLERLAQEEAQHRARQAEPVQKQGLWLD R L A H R A 2 1 0 0 0 2 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1080.5312 Q5JTZ9 Q5JTZ9 472 480 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2;3 0.00016959 166.09 By MS/MS 4.29 1.39 1 1 2 1 2 7 9198900 9198900 0 7923 1611 8202 19718;19719;19720;19721;19722;19723;19724 13900;13901;13902 13900 3 201940 0 LAQEQGGGDNSLLVR ARQLGSRYFALVERRLAQEQGGGDNSLLVR LAQEQGGGDNSLLVRALDRFHRRLRAPGAL R L A V R A 1 1 1 1 0 2 1 3 0 0 3 0 0 0 0 1 0 0 0 1 0 0 15 0 1555.7954 Q9UID3 Q9UID3 356 370 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 1.0601E-09 212.1 By MS/MS 5 0.816 1 1 1 3 3611400 3611400 0 7924 2791 8203 19725;19726;19727 13903 13903 1 108340 0 LAQFDYGR KYVLKPATEGKQRLKLAQFDYGRKCSEVAR EGKQRLKLAQFDYGRKCSEVARLTEGMSGR K L A G R K 1 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 8 0 968.47158 Q5T9A4;Q9NVI7 Q9NVI7 554 561 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.0089094 122.52 By MS/MS By matching 5 0.816 1 1 1 2 1 12443000 12412000 30384 7925 2655;1634 8204 19728;19729;19730 13904;13905 13905 2 321560 63491 LAQFEPSQR PPEDPSVPVALNIGKLAQFEPSQRQNQVGV ALNIGKLAQFEPSQRQNQVGVVPWSPPQSN K L A Q R Q 1 1 0 0 0 2 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 9 0 1074.5458 Q08211 Q08211 315 323 DHX9 ATP-dependent RNA helicase A yes yes 2 0.031649 90.15 By MS/MS 3 1.41 1 1 1 1 1 5 7818100 7818100 0 7926 1287 8205 19731;19732;19733;19734;19735 13906;13907 13907 2 232420 0 LAQGEYIAPEK NGTLKIIDRKKHIFKLAQGEYIAPEKIENI HIFKLAQGEYIAPEKIENIYMRSEPVAQVF K L A E K I 2 0 0 0 0 1 2 1 0 1 1 1 0 0 1 0 0 0 1 0 0 0 11 0 1217.6292 P33121;Q9ULC5 P33121 562 572 ACSL1;ACSL5 Long-chain-fatty-acid--CoA ligase 1;Long-chain-fatty-acid--CoA ligase 5 yes no 2 8.669E-05 163.84 By MS/MS 5 0 1 1 1222900 1222900 0 7927 766 8206 19736 13908 13908 1 50265 0 LAQGLTHLGK AQYHAKDPNNLFMVRLAQGLTHLGKGTLTL LFMVRLAQGLTHLGKGTLTLCPYHSDRQLM R L A G K G 1 0 0 0 0 1 0 2 1 0 3 1 0 0 0 0 1 0 0 0 0 0 10 0 1036.6029 Q13200 Q13200 764 773 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2;3 4.187E-05 174.86 By MS/MS 6.14 1.81 2 1 1 1 1 1 7 10515000 10515000 0 7928 1347 8207 19737;19738;19739;19740;19741;19742;19743 13909;13910 13909 2 363570 0 LAQLEEAK GPFVADFADKLNEQKLAQLEEAKQASIQHI DKLNEQKLAQLEEAKQASIQHIQNAIDTEK K L A A K Q 2 0 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 900.49165 P24539 P24539 132 139 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.006165 132.76 By MS/MS By matching 9 0.707 1 2 1 3 1 22946000 22826000 120330 7929 678 8208 19744;19745;19746;19747 13911;13912;13913 13912 3 12947000 1296800 LAQLITQAK YTPMFGPEARTLVLRLAQLITQAKHTAKSI RTLVLRLAQLITQAKHTAKSISDQCAESPA R L A A K H 2 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 9 0 984.59678 Q9NXE4 Q9NXE4 596 604 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 0.0092706 109.44 By MS/MS 4.5 0.5 1 1 2 992510 992510 0 7930 2686 8209 19748;19749 13914 13914 1 39335 0 LAQLLEGYAR PFLVSVPASRLTYARLAQLLEGYARYSVSV LTYARLAQLLEGYARYSVSVFQPPFQPGRM R L A A R Y 2 1 0 0 0 1 1 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 10 0 1132.6241 O94966 O94966 856 865 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 0.00077638 133.23 By MS/MS 4 0.816 1 1 1 3 1421500 1421500 0 7931 361 8210 19750;19751;19752 13915;13916 13915 2 39002 0 LAQLVGR ______________________________ ______________________________ R L A G R L 1 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 755.46537 Q9BX95 Q9BX95 7 13 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 0.019116 128.82 By MS/MS 1.5 0.5 1 1 2 265060 265060 0 7932 2400 8211 19753;19754 13917 13917 1 13048 0 LAQQISDEASR PNPSSECMLRNVSVRLAQQISDEASRYMPD VSVRLAQQISDEASRYMPDICVIRAIQKII R L A S R Y 2 1 0 1 0 2 1 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 11 0 1216.6048 Q93008 Q93008 1221 1231 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 5.1196E-05 169.21 By MS/MS 2.5 1.12 1 1 1 1 4 11691000 11691000 0 7933 2096 8212 19755;19756;19757;19758 13918;13919;13920;13921 13918 4 518590 0 LAQQPHQNQAK MGAERRLLSIKEAFRLAQQPHQNQAKLVVA EAFRLAQQPHQNQAKLVVALSRTYRTMDDK R L A A K L 2 0 1 0 0 4 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1261.6527 Q9BPX3 Q9BPX3 16 26 NCAPG Condensin complex subunit 3 yes yes 2;3 0.0014196 132.76 By MS/MS 3.67 0.471 1 2 3 963230 963230 0 7934 2302 8213 19759;19760;19761 13922;13923 13923 2 26250 0 LAQQQAALLMQQEER RVGEPVALSEEERLKLAQQQAALLMQQEER LAQQQAALLMQQEERAKQQGDHSLKEHELL K L A E R A 3 1 0 0 0 5 2 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 15 0 1755.8938 Q13435 Q13435 149 163 SF3B2 Splicing factor 3B subunit 2 yes yes 2 6.6097E-06 148.62 By MS/MS 3 0 1 1 473540 473540 0 7935 1369 8214 19762 13924 13924 1067 1 12362 0 LAQSHHVK LIIGSGGREHTLAWKLAQSHHVKQVLVAPG EHTLAWKLAQSHHVKQVLVAPGNAGTACSE K L A V K Q 1 0 0 0 0 1 0 0 2 0 1 1 0 0 0 1 0 0 0 1 0 0 8 0 918.50355 P22102 P22102 21 28 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.0053736 134.48 By MS/MS 4 0 1 1 226310 226310 0 7936 655 8215 19763 13925 13925 1 6178.1 0 LAQTFSPSIDILK TDFIKTGHYDLRERKLAQTFSPSIDILKSS RKLAQTFSPSIDILKSSNLERHLHLMANKD K L A L K S 1 0 0 1 0 1 0 0 0 2 2 1 0 1 1 2 1 0 0 0 0 0 13 0 1431.7973 Q8IYQ7 Q8IYQ7 556 568 THNSL1 Threonine synthase-like 1 yes yes 2 4.9726E-26 249.83 By MS/MS 5.5 0.5 1 1 2 1212200 1212200 0 7937 1882 8216 19764;19765 13926 13926 1 38995 0 LAQTSDVNK QNFVNFRYLIKFLAKLAQTSDVNKMTPSNI IKFLAKLAQTSDVNKMTPSNIAIVLGPNLL K L A N K M 1 0 1 1 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 9 0 974.50327 Q68EM7 Q68EM7 385 393 ARHGAP17 Rho GTPase-activating protein 17 yes yes 2 0.0018325 131.62 By MS/MS 4 0 1 1 799070 799070 0 7938 1675 8217 19766 13927 13927 1 21814 0 LAQVIFDKNDSDFEAK QPQKQVVQATAEQMRLAQVIFDKNDSDFEA AQVIFDKNDSDFEAKVKQLMEVTGKNQDEC R L A A K V 2 0 1 3 0 1 1 0 0 1 1 2 0 2 0 1 0 0 0 1 0 0 16 1 1838.905 Q5T6F2 Q5T6F2 41 56 UBAP2 Ubiquitin-associated protein 2 yes yes 3 0.029206 62.357 By MS/MS 3 0 1 1 402000 402000 0 7939 1630 8218 19767 13928 13928 1 10494 0 LAQVSPELLLASVR MFVEYRKQLKLLLDRLAQVSPELLLASVRR RLAQVSPELLLASVRRVFSSTLQNWQTTRF R L A V R R 2 1 0 0 0 1 1 0 0 0 4 0 0 0 1 2 0 0 0 2 0 0 14 0 1494.877 O43592 O43592 415 428 XPOT Exportin-T yes yes 2 0.050501 69.352 By MS/MS 4 0 1 1 907710 907710 0 7940 208 8219 19768 13929 13929 1 24780 0 LAQYDNLWR SVTLGDTVLVAKPHRLAQYDNLWRLSLRPA VAKPHRLAQYDNLWRLSLRPAETARLRALD R L A W R L 1 1 1 1 0 1 0 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 9 0 1177.588 Q9NQG6 Q9NQG6 330 338 MIEF1 Mitochondrial dynamics protein MID51 yes yes 2 0.002157 128.12 By MS/MS 6 0 1 1 2032500 2032500 0 7941 2589 8220 19769 13930 13930 1 15850 0 LAQYEPPQEEK KYEAIVEENKKLKAKLAQYEPPQEEKRAE_ LKAKLAQYEPPQEEKRAE____________ K L A E K R 1 0 0 0 0 2 3 0 0 0 1 1 0 0 2 0 0 0 1 0 0 0 11 0 1330.6405 Q99417 Q99417 90 100 MYCBP C-Myc-binding protein yes yes 2 0.00042027 145.99 By MS/MS By MS/MS 10 0 2 1 1 890710 586790 303920 7942 2264 8221 19770;19771 13931;13932 13932 2 623700 7795300 LAQYESK DEEESEEAKRLREERLAQYESKKAKKPALV AKRLREERLAQYESKKAKKPALVAKSSILL R L A S K K 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 7 0 837.42323 P24534 P24534 123 129 EEF1B2 Elongation factor 1-beta yes yes 2 0.016589 135.77 By MS/MS By matching 8.33 0.471 2 1 2 1 10504000 10458000 45846 7943 677 8222 19772;19773;19774 13933 13933 1 822400 391120 LAQYESKK DEEESEEAKRLREERLAQYESKKAKKPALV KRLREERLAQYESKKAKKPALVAKSSILLD R L A K K A 1 0 0 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 8 1 965.5182 P24534 P24534 123 130 EEF1B2 Elongation factor 1-beta yes yes 2 0.0049714 158.07 By MS/MS 8.5 0.5 1 1 2 3722000 3722000 0 7944 677 8223 19775;19776 13934 13934 1 280400 0 LASAFTEEQAVLYNQR AAIEAFNKCKTIYEKLASAFTEEQAVLYNQ ASAFTEEQAVLYNQRVEEISPNIRYCAYNI K L A Q R V 3 1 1 0 0 2 2 0 0 0 2 0 0 1 0 1 1 0 1 1 0 0 16 0 1838.9163 Q9UHB9 Q9UHB9 221 236 SRP68 Signal recognition particle subunit SRP68 yes yes 2;3 7.6398E-51 332.53 By MS/MS 5.33 0.471 2 1 3 3766300 3766300 0 7945 2779 8224 19777;19778;19779 13935;13936 13935 2 121880 0 LASALAPSIYEHEDIKK ELLKELSRKPDIYERLASALAPSIYEHEDI SALAPSIYEHEDIKKGILLQLFGGTRKDFS R L A K K G 3 0 0 1 0 0 2 0 1 2 2 2 0 0 1 2 0 0 1 0 0 0 17 1 1883.9993 P33991 P33991 462 478 MCM4 DNA replication licensing factor MCM4 yes yes 4 0.0033089 71.531 By MS/MS 5 0.816 1 1 1 3 4441600 4441600 0 7946 773 8225 19780;19781;19782 13937 13937 1 118660 0 LASALDLPLLR VNPSMVTKLRATFLKLASALDLPLLRINQA TFLKLASALDLPLLRINQANSPDLLSVSQY K L A L R I 2 1 0 1 0 0 0 0 0 0 5 0 0 0 1 1 0 0 0 0 0 0 11 0 1180.718 Q12768 Q12768 589 599 KIAA0196 WASH complex subunit strumpellin yes yes 2 0.00010969 160.36 By MS/MS 4 0 1 1 257250 257250 0 7947 1303 8226 19783 13938 13938 1 7022.5 0 LASALLAEQEPQPER EVAQREEELNSLKQKLASALLAEQEPQPER LASALLAEQEPQPERLVPVSPLPPKAALSR K L A E R L 3 1 0 0 0 2 3 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 15 0 1650.8577 O95396 O95396 28 42 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase yes yes 2 3.3204E-10 190.35 By MS/MS 7.5 0.5 1 1 2 3457900 3457900 0 7948 390 8227 19784;19785 13939 13939 1 88658 0 LASCSADGTVR GDAVWGLAFSPTSQRLASCSADGTVRIWDP TSQRLASCSADGTVRIWDPSSSSPACLCTF R L A V R I 2 1 0 1 1 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1135.5292 Q9NRL3 Q9NRL3 559 569 STRN4 Striatin-4 yes yes 2 0.021979 87.568 By MS/MS 4 0 1 1 531730 531730 0 7949 2607 8228 19786 13940 13940 1 14516 0 LASDHKDIHSSVSR VLTQCCKRIKDTVQKLASDHKDIHSSVSRV KLASDHKDIHSSVSRVGKAIDKNFDSDISS K L A S R V 1 1 0 2 0 0 0 0 2 1 1 1 0 0 0 4 0 0 0 1 0 0 14 1 1550.7801 Q9H871;Q96G75 Q9H871 75 88 RMND5A;RMND5B Protein RMD5 homolog A;Protein RMD5 homolog B yes no 3 0.010166 104.81 By MS/MS 7 0 1 1 428580 428580 0 7950 2523 8229 19787 13941 13941 1 7658.7 0 LASEEPPDDEEALATIR LIASTFVDQCKTVLKLASEEPPDDEEALAT SEEPPDDEEALATIRLLDVLCEMTVNTELL K L A I R L 3 1 0 2 0 0 4 0 0 1 2 0 0 0 2 1 1 0 0 0 0 0 17 0 1854.8847 Q9UBB4 Q9UBB4 289 305 ATXN10 Ataxin-10 yes yes 2 7.8023E-08 180.48 By MS/MS 7 0.816 1 1 1 3 16657000 16657000 0 7951 2744 8230 19788;19789;19790 13942 13942 1 282220 0 LASEILMQNWDAAMEDLTR VPATDRNALSSLWGKLASEILMQNWDAAME ILMQNWDAAMEDLTRLKETIDNNSVSSPLQ K L A T R L 3 1 1 2 0 1 2 0 0 1 3 0 2 0 0 1 1 1 0 0 0 0 19 0 2206.0398 P60228 P60228 173 191 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0046382 85.837 By MS/MS 6 0 1 1 66171 66171 0 7952 1065 8231 19791 13943 13943 1 516 0 LASEPQDPAAVSLPTSSVPETR LAVFQMLKSMCAGQRLASEPQDPAAVSLPT PAAVSLPTSSVPETRGRNKGSAALGGALAL R L A T R G 3 1 0 1 0 1 2 0 0 0 2 0 0 0 4 4 2 0 0 2 0 0 22 0 2251.1332 Q6NZ67;Q6P582 Q6NZ67 85 106 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A yes no 2;3 1.4167E-06 127.88 By MS/MS 9 0 2 2 3542100 3542100 0 7953 1696 8232 19792;19793 13944;13945 13944 2 2032800 0 LASFYEAAIPEMESAIK PLACQTFQKHDFCYRLASFYEAAIPEMESA SFYEAAIPEMESAIKKRRLEDSKLLGDLWQ R L A I K K 4 0 0 0 0 0 3 0 0 2 1 1 1 1 1 2 0 0 1 0 0 0 17 0 1868.923 Q9H1I8 Q9H1I8 279 295 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 2 0.0038729 102.97 By MS/MS 4 0 1 1 548540 548540 0 7954 2466 8233 19794 13946 13946 1510 1 14975 0 LASGEHIAAFCLTEPASGSDAASIR ILAGTEEQKAKYLPKLASGEHIAAFCLTEP CLTEPASGSDAASIRSRATLSEDKKHYILN K L A I R S 6 1 0 1 1 0 2 2 1 2 2 0 0 1 1 4 1 0 0 0 0 0 25 0 2530.2122 Q9H845 Q9H845 169 193 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 3 1.5441E-05 95.71 By MS/MS 6 0 1 1 7550300 7550300 0 7955 2521 8234 19795 13947 13947 1 58877 0 LASIVEQVSVLQNQGR AVVTRGDECGLALGRLASIVEQVSVLQNQG ASIVEQVSVLQNQGREMMLVTSGAVAFGKQ R L A G R E 1 1 1 0 0 3 1 1 0 1 2 0 0 0 0 2 0 0 0 3 0 0 16 0 1739.953 P54886 P54886 95 110 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 3.6639E-63 291.22 By MS/MS 5 0.816 1 1 1 3 8818300 8818300 0 7956 1019 8235 19796;19797;19798 13948;13949 13948 2 135890 0 LASIYAAQNR GMKQEDNAIIEISLKLASIYAAQNRQEFAV EISLKLASIYAAQNRQEFAVAGYEFCISTL K L A N R Q 3 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1105.588 Q6DKK2 Q6DKK2 185 194 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 3.547E-05 172.94 By MS/MS 8 0 1 1 1529700 1529700 0 7957 1679 8236 19799 13950 13950 1 100920 0 LASNALQEPSSFR AVTPVTILVFCGPARLASNALQEPSSFRVD ARLASNALQEPSSFRVDGIPNDSSDSEMED R L A F R V 2 1 1 0 0 1 1 0 0 0 2 0 0 1 1 3 0 0 0 0 0 0 13 0 1418.7154 Q9H6S0 Q9H6S0 1069 1081 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 1.0351E-07 186.76 By MS/MS 3 0 1 1 2156100 2156100 0 7958 2511 8237 19800 13951 13951 1 56285 0 LASQADSTEQVDDTILT SLEVLNEVNRRSLKKLASQADSTEQVDDTI SQADSTEQVDDTILT_______________ K L A L T - 2 0 0 3 0 2 1 0 0 1 2 0 0 0 0 2 3 0 0 1 0 0 17 0 1805.8531 Q92616 Q92616 2655 2671 GCN1L1 Translational activator GCN1 yes yes 2 0.0017136 116.24 By MS/MS 3 0.816 1 1 1 3 2549500 2549500 0 7959 2068 8238 19801;19802;19803 13952 13952 1 112180 0 LASQANIAQVLAELK DPIYVKLEKLDIMIRLASQANIAQVLAELK LASQANIAQVLAELKEYATEVDVDFVRKAV R L A L K E 4 0 1 0 0 2 1 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1567.8934 P63010;Q10567 Q10567 345 359 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 4.8292E-05 138.21 By MS/MS 4 0 1 1 146350 146350 0 7960 1300;1167 8239 19804 13953 13953 1 3995.1 0 LASQNFSYGVTEMYK ATDVMDIIINSGLIKLASQNFSYGVTEMYK LASQNFSYGVTEMYKACFLGATVKYLQKFI K L A Y K A 1 0 1 0 0 1 1 1 0 0 1 1 1 1 0 2 1 0 2 1 0 0 15 0 1736.808 Q9H9P8 Q9H9P8 360 374 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.03026 69.352 By MS/MS 8 0.816 1 1 1 3 2499000 2499000 0 7961 2536 8240 19805;19806;19807 13954 13954 1533 1 84276 0 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK NGKNIEDVIAQGIGKLASVPAGGAVAVSAA AAPAAGSAPAAAEEKKDEKKEESEESDDDM K L A E K K 14 0 0 0 0 0 2 4 0 0 1 1 0 0 4 4 0 0 0 3 0 0 33 0 2773.4246 P05387 P05387 62 94 RPLP2 60S acidic ribosomal protein P2 yes yes 3 0.026948 40.717 By MS/MS 10 0 1 1 726650 726650 0 7962 472 8241 19808 13955 13955 1 772350 0 LASVPEYR REGSPIPHDPEFGSKLASVPEYRYSQSAPG DPEFGSKLASVPEYRYSQSAPGSPVSAQPV K L A Y R Y 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 8 0 933.49198 P85037 P85037 457 464 FOXK1 Forkhead box protein K1 yes yes 2 0.023957 101.64 By MS/MS 4 0 1 1 946420 946420 0 7963 1220 8242 19809 13956 13956 1 25836 0 LASYLDK LSGNEKVTMQNLNDRLASYLDKVRALEESN TMQNLNDRLASYLDKVRALEESNYELEGKI R L A D K V 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 7 0 808.43307 P35527;CON__P35527;CON__P13645;P13645;CON__P05784;CON__Q99456;Q99456;CON__P02533;P02533;CON__P19012;CON__A2A4G1;P19012;CON__P08727;CON__P19001;P08727;CON__P08779;P08779;CON__Q04695;Q04695;CON__Q9QWL7 CON__P13645 157 163 KRT9;KRT10;KRT12;KRT14;KRT15;KRT19;KRT16;KRT17 Keratin, type I cytoskeletal 9;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 2 0.0077484 163.34 By MS/MS By MS/MS 5.17 2.73 1 1 2 2 1 1 1 1 1 1 5 7 24572000 12597000 11975000 + 7964 49;791;35;47;54 8243 19810;19811;19812;19813;19814;19815;19816;19817;19818;19819;19820;19821 13957;13958;13959;13960;13961;13962;13963;13964;13965 13965 9 3285800 23894000 LASYLDKVR LSGNEKVTMQNLNDRLASYLDKVRALEESN QNLNDRLASYLDKVRALEESNYELEGKIKE R L A V R A 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 1 1063.6026 CON__P13645;P13645;CON__Q99456;Q99456;CON__P02533;P02533;CON__P19012;CON__A2A4G1;P19012;CON__P08727;CON__P19001;P08727;CON__P08779;P08779;CON__Q04695;Q04695;CON__Q9QWL7 CON__P13645 157 165 KRT10;KRT12;KRT14;KRT15;KRT19;KRT16;KRT17 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 2;3 0.0075854 141.52 By MS/MS By MS/MS 5.38 3.05 3 3 2 2 3 2 2 1 3 3 13 11 43644000 32836000 10808000 + 7965 49;35;47;54 8244 19822;19823;19824;19825;19826;19827;19828;19829;19830;19831;19832;19833;19834;19835;19836;19837;19838;19839;19840;19841;19842;19843;19844;19845 13966;13967;13968;13969;13970;13971;13972;13973 13970 8 6365800 28734000 LATAHAK RTSPVTARTLETLIRLATAHAKARMSKTVD RTLETLIRLATAHAKARMSKTVDLQDAEEA R L A A K A 3 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 7 0 710.40752 P25205 P25205 624 630 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.050496 101.21 By MS/MS 3.5 0.5 1 1 2 1061200 1061200 0 7966 683 8245 19846;19847 13974 13974 1 28950 0 LATAMQEGEYDAERPPSKPPPVELR CLRQSCNILISTMNKLATAMQEGEYDAERP DAERPPSKPPPVELRAAALRAEITDAEGLG K L A L R A 3 2 0 1 0 1 4 1 0 0 2 1 1 0 5 1 1 0 1 1 0 0 25 2 2780.3803 Q14203 Q14203 903 927 DCTN1 Dynactin subunit 1 yes yes 4 0.025705 41.672 By MS/MS 3 0 1 1 1586700 1586700 0 7967 1420 8246 19848 13975 13975 1095 1 41422 0 LATATFAGIENK ADLPPANPDHIGGYRLATATFAGIENKFGL GYRLATATFAGIENKFGLYLPKFKSPSVAV R L A N K F 3 0 1 0 0 0 1 1 0 1 1 1 0 1 0 0 2 0 0 0 0 0 12 0 1234.6558 O75746 O75746 641 652 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 9.8091E-33 252.16 By MS/MS 5 0 1 1 15195000 15195000 0 7968 327 8247 19849 13976 13976 1 624580 0 LATCSSDR EDMIHDAQMDYYGTRLATCSSDRSVKIFDV MDYYGTRLATCSSDRSVKIFDVRNGGQILI R L A D R S 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 8 0 908.40218 P55735 P55735 28 35 SEC13 Protein SEC13 homolog yes yes 2 0.019809 107.01 By MS/MS 7.5 0.5 1 1 2 1080900 1080900 0 7969 1033 8248 19850;19851 13977 13977 1 66107 0 LATDLLSLMPSLTSGEVAHCAK AYGKLSFHQTQVSQRLATDLLSLMPSLTSG LMPSLTSGEVAHCAKSFALLKWLSLPLFEA R L A A K S 3 0 0 1 1 0 1 1 1 0 5 1 1 0 1 3 2 0 0 1 0 0 22 0 2313.1709 Q969Z0 Q969Z0 316 337 TBRG4 Protein TBRG4 yes yes 3 0.00028662 86.573 By MS/MS 6 0 1 1 4466800 4466800 0 7970 2112 8249 19852 13978 13978 1 34832 0 LATEFELR QKTAVEKAGPEMDKRLATEFELRKHARQEG GPEMDKRLATEFELRKHARQEGRRYCDPVV R L A L R K 1 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 977.5182 A5YKK6 A5YKK6 1523 1530 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.023284 102.51 By MS/MS 2 0 1 1 1138500 1138500 0 7971 19 8250 19853 13979 13979 1 56591 0 LATFWYYAK TPALVNAAVTYSKPRLATFWYYAKVELVPP TYSKPRLATFWYYAKVELVPPTPAEIPRAI R L A A K V 2 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 1 2 0 0 0 9 0 1161.5859 O75964 O75964 27 35 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 0.0055602 114.5 By MS/MS 10 0 1 1 175580 175580 0 7972 341 8251 19854 13980 13980 1 186630 0 LATLCPAPVLQR DHYDIRMLTFIMVARLATLCPAPVLQRVDR VARLATLCPAPVLQRVDRLIEPLRATCTAK R L A Q R V 2 1 0 0 1 1 0 0 0 0 3 0 0 0 2 0 1 0 0 1 0 0 12 0 1337.7489 O75155 O75155 1135 1146 CAND2 Cullin-associated NEDD8-dissociated protein 2 yes yes 2 0.0011935 139.98 By MS/MS 3.5 0.5 1 1 2 1556000 1556000 0 7973 286 8252 19855;19856 13981 13981 1 41191 0 LATLLGLQAPPTR RLLDMDGIIVEKQRRLATLLGLQAPPTRIG RRLATLLGLQAPPTRIGLINDMVRFNVLQY R L A T R I 2 1 0 0 0 1 0 1 0 0 4 0 0 0 2 0 2 0 0 0 0 0 13 0 1349.8031 Q14152 Q14152 355 367 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 2.626E-05 167.2 By MS/MS By matching 3.75 0.829 2 1 1 3 1 6954700 6907300 47320 7974 1409 8253 19857;19858;19859;19860 13982;13983;13984 13983 3 182180 67819 LATMYSSGSPEGGSDSSESR SNGSNGWFRFILDGKLATMYSSGSPEGGSD SSGSPEGGSDSSESRSEFLEKLQRARGQVK K L A S R S 1 1 0 1 0 0 2 3 0 0 1 0 1 0 1 7 1 0 1 0 0 0 20 0 2003.8378 Q9ULT8 Q9ULT8 702 721 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 3.3584E-08 151.56 By MS/MS 2 0 1 1 244590 244590 0 7975 2826 8254 19861 13985 13985 1 12157 0 LATNAAVTVLR AGILDTYLGKYWAIKLATNAAVTVLRVDQI WAIKLATNAAVTVLRVDQIIMAKPAGGPKP K L A L R V 3 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 2 0 0 11 0 1127.6663 P50990 P50990 510 520 CCT8 T-complex protein 1 subunit theta yes yes 2 6.9553E-16 214.82 By MS/MS By matching 5.7 2.83 1 1 1 1 2 1 1 1 1 9 1 321710000 321650000 62874 7976 955 8255 19862;19863;19864;19865;19866;19867;19868;19869;19870;19871 13986;13987;13988;13989;13990;13991 13989 6 3590200 192830 LATNTSAPDLK PTSAKPSSTTPRLSRLATNTSAPDLKNVRS RLSRLATNTSAPDLKNVRSKVGSTENIKHQ R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 P27816 P27816 923 933 MAP4 Microtubule-associated protein 4 yes yes 2 0.00049957 158.47 By MS/MS 2.5 0.5 1 1 2 1100600 1100600 0 7977 710 8256 19872;19873 13992 13992 1 37904 0 LATPELLETAQALER EVNEILFCQLHPEQKLATPELLETAQALER LATPELLETAQALERTLRKPGRGWDDTYVL K L A E R T 3 1 0 0 0 1 3 0 0 0 4 0 0 0 1 0 2 0 0 0 0 0 15 0 1653.8938 Q8N6R0 Q8N6R0 660 674 METTL13 Methyltransferase-like protein 13 yes yes 2 1.0625E-20 225.33 By MS/MS 5.5 0.5 1 1 2 1025100 1025100 0 7978 1930 8257 19874;19875 13993 13993 1 25267 0 LATQLTGPVMPVR PSAPKKGDSSAEELKLATQLTGPVMPVRNV LKLATQLTGPVMPVRNVYKKEKARVITEEE K L A V R N 1 1 0 0 0 1 0 1 0 0 2 0 1 0 2 0 2 0 0 2 0 0 13 0 1381.7752 P26373 P26373 146 158 RPL13 60S ribosomal protein L13 yes yes 2 5.9925E-06 173.64 By MS/MS By MS/MS 8 0 2 1 1 1364600 1272400 92218 7979 695 8258 19876;19877 13994;13995 13995 466 2 83939 786730 LATQSNEITIPVTFESR LSPEGTLTVEAPMPKLATQSNEITIPVTFE TQSNEITIPVTFESRAQLGGPEAAKSDETA K L A S R A 1 1 1 0 0 1 2 0 0 2 1 0 0 1 1 2 3 0 0 1 0 0 17 0 1904.9844 P04792 P04792 172 188 HSPB1 Heat shock protein beta-1 yes yes 2 0.00017449 132.51 By MS/MS 8 0 1 1 2693100 2693100 0 7980 456 8259 19878 13996 13996 1 177660 0 LATTILQHWK QSFRERANQKHQGLKLATTILQHWKKCDSW HQGLKLATTILQHWKKCDSWWAKDSPLETK K L A W K K 1 0 0 0 0 1 0 0 1 1 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1209.687 P78527 P78527 1618 1627 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.052754 78.334 By MS/MS 1 0 1 1 146080 146080 0 7981 1197 8260 19879 13997 13997 1 7137.4 0 LAVADAVIEK EVVRRSAGMNTARYKLAVADAVIEKFAPIK TARYKLAVADAVIEKFAPIKREIEKLKLDK K L A E K F 3 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1027.5914 Q9UGM6 Q9UGM6 304 313 WARS2 Tryptophan--tRNA ligase, mitochondrial yes yes 2 0.018282 93.556 By MS/MS 7 0 1 1 1152100 1152100 0 7982 2773 8261 19880 13998 13998 1 20588 0 LAVAGEDAR AAVTDLAWDPFDPHRLAVAGEDARIRLWRV PFDPHRLAVAGEDARIRLWRVPAEGLEEVL R L A A R I 3 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 900.46649 P57737 P57737 560 568 CORO7 Coronin-7 yes yes 2 0.015745 99.139 By MS/MS 4 0 1 1 1098800 1098800 0 7983 1056 8262 19881 13999 13999 1 29997 0 LAVASVTEILK RKSLAGMLTPYVARKLAVASVTEILKMLNS VARKLAVASVTEILKMLNSNTESPYLIWNN K L A L K M 2 0 0 0 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 2 0 0 11 0 1142.6911 O75165 O75165 1621 1631 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0013581 128.86 By MS/MS 2 0 1 1 131770 131770 0 7984 287 8263 19882 14000 14000 1 6549.7 0 LAVATFAGIENK INLPAPNPDHVGGYKLAVATFAGIENKFGL GYKLAVATFAGIENKFGLYLPLFKPSVSTS K L A N K F 3 0 1 0 0 0 1 1 0 1 1 1 0 1 0 0 1 0 0 1 0 0 12 0 1232.6765 Q9UJS0 Q9UJS0 642 653 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 1.5573E-34 270.54 By MS/MS 6.33 2.92 1 1 1 1 1 1 6 19631000 19631000 0 7985 2798 8264 19883;19884;19885;19886;19887;19888 14001;14002;14003;14004 14002 3 1098100 0 LAVEALSSLDGDLAGR LPPHCSRGERRAIEKLAVEALSSLDGDLAG AVEALSSLDGDLAGRYYALKSMTEAEQQQL K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 P12277 P12277 157 172 CKB Creatine kinase B-type yes yes 2 1.5762E-39 269.44 By MS/MS 7 0 2 2 2736700 2736700 0 7986 565 8265 19889;19890 14005;14006 14006 2 48905 0 LAVEAVLR LSSKLLTHHKDHFTKLAVEAVLRLKGSGNL HKDHFTKLAVEAVLRLKGSGNLEAIHIIKK K L A L R L 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 P78371 P78371 182 189 CCT2 T-complex protein 1 subunit beta yes yes 2 0.0090135 122.13 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 122330000 122330000 0 7987 1195 8266 19891;19892;19893;19894;19895;19896 14007;14008;14009;14010 14008 4 1150500 0 LAVIQEAR SPAPLEPEPGAAQPKLAVIQEARFAQSAPG PGAAQPKLAVIQEARFAQSAPGSPLSSQPV K L A A R F 2 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 898.52362 Q01167 Q01167 413 420 FOXK2 Forkhead box protein K2 yes yes 2 0.014016 114.5 By MS/MS By matching 4.67 0.471 1 2 1 2 846970 815200 31771 7988 1240 8267 19897;19898;19899 14011 14011 1 33508 74685 LAVLMEAQCR MKMARLLARFLREGRLAVLMEAQCRQQTQP LREGRLAVLMEAQCRQQTQPGFILLRETLL R L A C R Q 2 1 0 0 1 1 1 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 10 0 1189.5947 Q9Y4R8 Q9Y4R8 133 142 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.016974 109.29 By MS/MS 4 0 1 1 361340 361340 0 7989 2958 8268 19900 14012 14012 1 9864.1 0 LAVLPYELR REVVTEIRDKATRRRLAVLPYELRFKEPLP KATRRRLAVLPYELRFKEPLPEYVRLVTEF R L A L R F 1 1 0 0 0 0 1 0 0 0 3 0 0 0 1 0 0 0 1 1 0 0 9 0 1072.6281 Q9ULX3 Q9ULX3 46 54 NOB1 RNA-binding protein NOB1 yes yes 2 0.025849 93.429 By MS/MS 6.5 0.5 1 1 2 4009900 4009900 0 7990 2829 8269 19901;19902 14013 14013 1 67502 0 LAVNMVPFPR TCLRFPGQLNADLRKLAVNMVPFPRLHFFM ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG K L A P R L 1 1 1 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 2 0 0 10 0 1142.627 P07437;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q13885;Q9BVA1;P04350;Q13509;Q3ZCM7;Q9BUF5 P68371 253 262 TUBB;TUBB1;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 2 9.0422E-07 178.83 By MS/MS By MS/MS 5.53 2.16 1 1 2 2 2 4 3 3 1 15 4 476560000 474940000 1619800 7991 1187;490;1400;2375;451;1377;2363;1572 8270;8271 19903;19904;19905;19906;19907;19908;19909;19910;19911;19912;19913;19914;19915;19916;19917;19918;19919;19920;19921 14014;14015;14016;14017;14018;14019;14020;14021;14022;14023;14024;14025;14026;14027;14028;14029;14030;14031;14032 14025 235 19 5152800 5375100 LAVQFTNR AGLCPAACMQTPRMKLAVQFTNRNQYCYGS MQTPRMKLAVQFTNRNQYCYGSRDLLGLHN K L A N R N 1 1 1 0 0 1 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8 0 947.51886 Q7L8L6 Q7L8L6 697 704 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.0028561 151.04 By MS/MS 5 0 1 1 3833900 3833900 0 7992 1770 8272 19922 14033 14033 1 157590 0 LAVVDPLFGMQPIR ENVNGYTNCCFGFHRLAVVDPLFGMQPIRV RLAVVDPLFGMQPIRVKKYPYLWLCYNGEI R L A I R V 1 1 0 1 0 1 0 1 0 1 2 0 1 1 2 0 0 0 0 2 0 0 14 0 1554.8592 P08243 P08243 50 63 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.012385 90.913 By MS/MS 6 0 1 1 1485200 1485200 0 7993 503 8273 19923 14034 14034 1 11582 0 LAWAPLVDAQGSAR RVGLAKVLYAPWLLKLAWAPLVDAQGSARA KLAWAPLVDAQGSARAWVTRSTAGLGLVCG K L A A R A 4 1 0 1 0 1 0 1 0 0 2 0 0 0 1 1 0 1 0 1 0 0 14 0 1453.7678 Q96ES6 Q96ES6 54 67 MFSD3 Major facilitator superfamily domain-containing protein 3 yes yes 2 0.0092181 111.52 By MS/MS 7 0 1 1 292980 292980 0 7994 2167 8274 19924 14035 14035 1 5235.7 0 LAWGQPVGLR ERTDFKEEPEPGFKRLAWGQPVGLRHTGYV PGFKRLAWGQPVGLRHTGYVIELQHVVKGP R L A L R H 1 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 0 1 0 1 0 0 10 0 1095.6189 P47897 P47897 630 639 QARS Glutamine--tRNA ligase yes yes 2 0.0067533 101.72 By MS/MS 5 0 1 1 1144200 1144200 0 7995 896 8275 19925 14036 14036 1 47032 0 LAYEGVSSR SNLSLMAYAARTMGKLAYEGVSSRKTYFSE ARTMGKLAYEGVSSRKTYFSEEDVCGCLEA K L A S R K 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 1 1 0 0 9 0 980.49271 Q86UT6 Q86UT6 432 440 NLRX1 NLR family member X1 yes yes 2 0.0050099 115.7 By MS/MS 4.5 0.5 1 1 2 2186500 2186500 0 7996 1825 8276 19926;19927 14037 14037 1 64444 0 LAYELYTEALGIDPNNIK KKEDGNKAFKEGNYKLAYELYTEALGIDPN ELYTEALGIDPNNIKTNAKLYCNRGTVNSK K L A I K T 2 0 2 1 0 0 2 1 0 2 3 1 0 0 1 0 1 0 2 0 0 0 18 0 2036.0466 Q99615 Q99615 274 291 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2;3 1.4363E-10 160.48 By MS/MS 6 0 2 2 7493300 7493300 0 7997 2276 8277 19928;19929 14038;14039 14038 2 58433 0 LAYINPDLALEEK KKCQQAEKILKEQERLAYINPDLALEEKNK ERLAYINPDLALEEKNKGNECFQKGDYPQA R L A E K N 2 0 1 1 0 0 2 0 0 1 3 1 0 0 1 0 0 0 1 0 0 0 13 0 1487.7872 P31948 P31948 352 364 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 2.9298E-12 210.95 By MS/MS 6.5 1.71 1 1 1 1 1 1 6 38191000 38191000 0 7998 762 8278 19930;19931;19932;19933;19934;19935 14040;14041;14042 14041 3 836360 0 LAYQELQIDR DAKKQAEESMVASMRLAYQELQIDRKKEEK VASMRLAYQELQIDRKKEEKKLQNLEGKKR R L A D R K 1 1 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1247.651 Q8N6H7 Q8N6H7 276 285 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 2 0.016974 94.465 By MS/MS 6 0 1 1 1023600 1023600 0 7999 1928 8279 19936 14043 14043 1 7981.9 0 LAYQTDNK DEPEEAELILHDALRLAYQTDNKKAITYTY ILHDALRLAYQTDNKKAITYTYDLMANLAF R L A N K K 1 0 1 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 8 0 951.46616 Q6DKK2 Q6DKK2 125 132 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 0.031446 98.629 By MS/MS 8 0 1 1 288330 288330 0 8000 1679 8280 19937 14044 14044 1 19021 0 LAYQTDNKK DEPEEAELILHDALRLAYQTDNKKAITYTY LHDALRLAYQTDNKKAITYTYDLMANLAFI R L A K K A 1 0 1 1 0 1 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 0 9 1 1079.5611 Q6DKK2 Q6DKK2 125 133 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 2 0.0082914 134.48 By MS/MS 8 0 1 1 970180 970180 0 8001 1679 8281 19938 14045 14045 1 64003 0 LAYYYQR FVGLQGSGKTTTCSKLAYYYQRKGWKTCLI GKTTTCSKLAYYYQRKGWKTCLICADTFRA K L A Q R K 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 7 0 975.48142 P61011 P61011 121 127 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.018084 131.65 By MS/MS 6.5 0.5 1 1 2 5653500 5653500 0 8002 1082 8282 19939;19940 14046 14046 1 45876 0 LCAGASEDIR CVQGKEERNYHIFYRLCAGASEDIREKLHL HIFYRLCAGASEDIREKLHLSSPDNFRYLN R L C I R E 2 1 0 1 1 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1090.5077 Q9UM54 Q9UM54 251 260 MYO6 Unconventional myosin-VI yes yes 2 0.0039893 110.76 By MS/MS 3 0 1 1 634030 634030 0 8003 2833 8283 19941 14047 14047 1 16551 0 LCAGASEDIREK CVQGKEERNYHIFYRLCAGASEDIREKLHL FYRLCAGASEDIREKLHLSSPDNFRYLNRG R L C E K L 2 1 0 1 1 0 2 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 12 1 1347.6453 Q9UM54 Q9UM54 251 262 MYO6 Unconventional myosin-VI yes yes 3 0.005931 101.71 By MS/MS 3 0 1 1 411270 411270 0 8004 2833 8284 19942 14048 14048 1 10736 0 LCATQFNNIFFLD QKNANLIEVNEEVKKLCATQFNNIFFLD__ KKLCATQFNNIFFLD_______________ K L C L D - 1 0 2 1 1 1 0 0 0 1 2 0 0 3 0 0 1 0 0 0 0 0 13 0 1601.7548 P86791;P86790 P86791 470 482 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 2 0.029961 79.07 By MS/MS 6 0 1 1 47709 47709 0 8005 1222 8285 19943 14049 14049 1 372.03 0 LCDFGFAR ENVLLASADPFPQVKLCDFGFARIIGEKSF DPFPQVKLCDFGFARIIGEKSFRRSVVGTP K L C A R I 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 984.44874 Q9BZL6;Q00532;Q92772;Q8IVW4;O76039;Q9NRP7;O94806 Q9BZL6 693 700 PRKD2;CDKL1;CDKL2;CDKL3;CDKL5;STK36;PRKD3 Serine/threonine-protein kinase D2;Cyclin-dependent kinase-like 1;Cyclin-dependent kinase-like 2;Cyclin-dependent kinase-like 3;Cyclin-dependent kinase-like 5;Serine/threonine-protein kinase 36;Serine/threonine-protein kinase D3 no no 2 0.039336 95.531 By MS/MS 4 0 1 1 1425800 1425800 0 8006 2425;351 8286 19944 14050 14050 1 38924 0 LCDLAGPSSTESESR EAIKIMKEILGSPQRLCDLAGPSSTESESR LCDLAGPSSTESESRKRSISKRKSHLDLLK R L C S R K 1 1 0 1 1 0 2 1 0 0 2 0 0 0 1 4 1 0 0 0 0 0 15 0 1607.7097 Q5TH69 Q5TH69 376 390 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 4.2645E-10 150.51 By MS/MS 2 0 1 1 0 0 0 8007 1642 8287 19945 14051 14051 1 0 0 LCEAICPAQAITIEAEPR LRRYPSGEERCIACKLCEAICPAQAITIEA AICPAQAITIEAEPRADGSRRTTRYDIDMT K L C P R A 4 1 0 0 2 1 3 0 0 3 1 0 0 0 2 0 1 0 0 0 0 0 18 0 2040.9972 O00217 O00217 116 133 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 2;3 3.4545E-07 151.49 By MS/MS 9.33 0.471 2 1 3 4877400 4877400 0 8008 79 8288 19946;19947;19948 14052;14053 14052 2 2828200 0 LCEFNCNIR DTGYIWMGTASLKEKLCEFNCNIRAPPKQM ASLKEKLCEFNCNIRAPPKQMVWCSRPRSK K L C I R A 0 1 2 0 2 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1224.538 Q9H269 Q9H269 254 262 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 1.8728E-05 175.91 By MS/MS 4 0 1 1 1066200 1066200 0 8009 2472 8289 19949 14054 14054 1 29105 0 LCEIFTR LLKNQRTLSRVELKRLCEIFTRMFADPHGK LSRVELKRLCEIFTRMFADPHGKRVFSMFL R L C T R M 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 7 0 937.46914 O75122;Q7Z460 O75122 695 701 CLASP2;CLASP1 CLIP-associating protein 2;CLIP-associating protein 1 no no 2 0.020563 124.83 By MS/MS 3 0 1 1 1219700 1219700 0 8010 279;1790 8290 19950 14055 14055 1 31841 0 LCENYIK FDDLKCDAERENFHRLCENYIKSWFEGQGL AERENFHRLCENYIKSWFEGQGLAGKLRAI R L C I K S 0 0 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 7 0 938.45315 Q9H3U1 Q9H3U1 394 400 UNC45A Protein unc-45 homolog A yes yes 2 0.022095 120.62 By MS/MS 4.5 0.5 1 1 2 3154000 3154000 0 8011 2493 8291 19951;19952 14056 14056 1 91364 0 LCESNRVDAK SRLRKAVKHAEELERLCESNRVDAKTKLEA EELERLCESNRVDAKTKLEAQAYTAYLSGM R L C A K T 1 1 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 1 1190.5714 Q9UHB9 Q9UHB9 172 181 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0041856 142.36 By MS/MS 5 0 1 1 1648100 1648100 0 8012 2779 8292 19953 14057 14057 1 67744 0 LCGDTSLNNMQR YLRPHLEATLQLSLKLCGDTSLNNMQRQLA SLKLCGDTSLNNMQRQLALEVIVTLSETAA K L C Q R Q 0 1 2 1 1 1 0 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 12 0 1407.6235 O00410 O00410 265 276 IPO5 Importin-5 yes yes 2 7.1557E-17 225.01 By MS/MS 4.75 0.829 2 1 1 4 2122100 2122100 0 8013 91 8293;8294 19954;19955;19956;19957 14058;14059 14058 59 2 52511 0 LCHDKETYK DRIENIDHLGFFIYRLCHDKETYKLQRRET GFFIYRLCHDKETYKLQRRETIKGIQKREA R L C Y K L 0 0 0 1 1 0 1 0 1 0 1 2 0 0 0 0 1 0 1 0 0 0 9 1 1192.5547 Q9Y287 Q9Y287 222 230 ITM2B Integral membrane protein 2B;BRI2, membrane form;BRI2 intracellular domain;BRI2C, soluble form;Bri23 peptide yes yes 2 0.010141 136.57 By MS/MS 7 0 1 1 322000 322000 0 8014 2877 8295 19958 14060 14060 1 5754.2 0 LCLELLNVGVESK VRGILNKLTPEKFDKLCLELLNVGVESKLI DKLCLELLNVGVESKLILKGVILLIVDKAL K L C S K L 0 0 1 0 1 0 2 1 0 0 4 1 0 0 0 1 0 0 0 2 0 0 13 0 1472.7909 P78344 P78344 96 108 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 1.471E-11 197.07 By MS/MS 4 0 1 1 577610 577610 0 8015 1192 8296 19959 14061 14061 1 15768 0 LCLQHEDLAK MPSVIRAHAIITLGKLCLQHEDLAKKSIPA ITLGKLCLQHEDLAKKSIPALVRELEVCED K L C A K K 1 0 0 1 1 1 1 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1225.6125 P42695 P42695 930 939 NCAPD3 Condensin-2 complex subunit D3 yes yes 3 0.044981 83.397 By MS/MS 3 0 1 1 570140 570140 0 8016 853 8297 19960 14062 14062 1 14884 0 LCLQSIAFISR EHIIMKPACPLFVRRLCLQSIAFISRLAPT FVRRLCLQSIAFISRLAPTVP_________ R L C S R L 1 1 0 0 1 1 0 0 0 2 2 0 0 1 0 2 0 0 0 0 0 0 11 0 1306.7067 P57088 P57088 231 241 TMEM33 Transmembrane protein 33 yes yes 2 0.0004369 167.12 By MS/MS 9 0 1 1 203310 203310 0 8017 1053 8298 19961 14063 14063 1 116680 0 LCNIFSTK DEKKVTGGRNGYGAKLCNIFSTKFTVETAS RNGYGAKLCNIFSTKFTVETASREYKKMFK K L C T K F 0 0 1 0 1 0 0 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 8 0 981.49535 P11388;Q02880 P11388 169 176 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 2 0.02209 104.06 By MS/MS 3 0 1 1 723510 723510 0 8018 553;1258 8299 19962 14064 14064 1 18887 0 LCNLEEGSPGSGTYTR ______________________________ CNLEEGSPGSGTYTRHGYIFSSLAGCLMKS R L C T R H 0 1 1 0 1 0 2 3 0 0 2 0 0 0 1 2 2 0 1 0 0 0 16 0 1739.7785 Q9Y3B2 Q9Y3B2 14 29 EXOSC1 Exosome complex component CSL4 yes yes 2 9.9942E-21 217.2 By MS/MS 9 0 1 1 708050 708050 0 8019 2924 8300 19963 14065 14065 1 406360 0 LCPEASDIATSVR GQNKSFFGPLELVEKLCPEASDIATSVRNL EKLCPEASDIATSVRNLPELKTAVGRGRAW K L C V R N 2 1 0 1 1 0 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1417.6871 Q96T51 Q96T51 183 195 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 0.00063935 143 By MS/MS 5 0 1 1 2091600 2091600 0 8020 2259 8301 19964 14066 14066 1 85975 0 LCPNSTGAEIR SMSVERDIRFELLARLCPNSTGAEIRSVCT LLARLCPNSTGAEIRSVCTEAGMFAIRARR R L C I R S 1 1 1 0 1 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1216.587 P35998 P35998 376 386 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.009566 98.754 By MS/MS By matching 7.25 1.64 2 1 1 3 1 26037000 26020000 17580 8021 801 8302 19965;19966;19967;19968 14067;14068;14069 14067 3 628160 53916 LCPPGIPTPGSGLPPPR GNPGGQTVRERLTERLCPPGIPTPGSGLPP PPGIPTPGSGLPPPRKVLILGSGGLSIGQA R L C P R K 0 1 0 0 1 0 0 3 0 1 2 0 0 0 7 1 1 0 0 0 0 0 17 0 1711.908 P27708 P27708 378 394 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.030185 73.435 By MS/MS 2 0.816 1 1 1 3 495270 495270 0 8022 709 8303 19969;19970;19971 14070 14070 1 22115 0 LCQDLPCFSR PSKSYVKLRDFVLVKLCQDLPCFSREKLMQ FVLVKLCQDLPCFSREKLMQGFNEDMAIEA K L C S R E 0 1 0 1 2 1 0 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1294.5798 O14929 O14929 293 302 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.0008484 129.89 By MS/MS 6.5 0.5 1 1 2 3714200 3714200 0 8023 134 8304 19972;19973 14071 14071 1 61867 0 LCSLLDSEDYNTCEGAFGALQK ASKGELQNWPDLLPKLCSLLDSEDYNTCEG EDYNTCEGAFGALQKICEDSAEILDSDVLD K L C Q K I 2 0 1 2 2 1 2 2 0 0 4 1 0 1 0 2 1 0 1 0 0 0 22 0 2490.1043 Q92973 Q92973 141 162 TNPO1 Transportin-1 yes yes 3 0.0032594 72.883 By MS/MS 4 0 1 1 265660 265660 0 8024 2093 8305 19974 14072 14072 1 7252.3 0 LCTFILK CKACGYRGMLDTHHKLCTFILKNPPENSDS GMLDTHHKLCTFILKNPPENSDSGTGKKEK K L C L K N 0 0 0 0 1 0 0 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 7 0 893.50446 P55010 P55010 137 143 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.006012 174.64 By MS/MS 6 0 1 1 2202300 2202300 0 8025 1021 8306 19975 14073 14073 1 17174 0 LCTSATESEVAR KIDDMMFVLQGQWMRLCTSATESEVARGKN WMRLCTSATESEVARGKNILRNALVSHLDG R L C A R G 2 1 0 0 1 0 2 0 0 0 1 0 0 0 0 2 2 0 0 1 0 0 12 0 1322.6136 P31930 P31930 379 390 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 1.6675E-18 233.09 By MS/MS By matching 7.8 1.47 1 2 1 1 4 1 11945000 11922000 23111 8026 756 8307 19976;19977;19978;19979;19980 14074;14075;14076 14075 3 316340 94875 LCTVNSVEEK RAHRIGQQNEVRVLRLCTVNSVEEKILAAA VRVLRLCTVNSVEEKILAAAKYKLNVDQKV R L C E K I 0 0 1 0 1 0 2 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 10 0 1177.5649 P51532;P51531 P51532 1204 1213 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 7.6838E-05 168.26 By MS/MS 2 0 1 1 566650 566650 0 8027 965 8308 19981 14077 14077 1 28166 0 LCYDAFTENMAGENQLLER SCITEGNELTKTLIKLCYDAFTENMAGENQ AFTENMAGENQLLERRRLYHCAAYNCAISV K L C E R R 2 1 2 1 1 1 3 1 0 0 3 0 1 1 0 0 1 0 1 0 0 0 19 0 2273.0093 P78527 P78527 1918 1936 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.0010978 105.58 By MS/MS 1.8 0.748 2 2 1 5 802750 802750 0 8028 1197 8309 19982;19983;19984;19985;19986 14078;14079;14080 14078 959 3 37930 0 LCYVGYNIEQEQK NHSADFETVRMIKEKLCYVGYNIEQEQKLA EKLCYVGYNIEQEQKLALETTVLVESYTLP K L C Q K L 0 0 1 0 1 2 2 1 0 1 1 1 0 0 0 0 0 0 2 1 0 0 13 0 1642.7661 P61160 P61160 220 232 ACTR2 Actin-related protein 2 yes yes 2 9.3872E-46 271.62 By MS/MS 7 0 1 1 4253400 4253400 0 8029 1089 8310 19987 14081 14081 1 76009 0 LCYYIGATDDAATK ELIKFCREARGKENRLCYYIGATDDAATKI RLCYYIGATDDAATKIINEVSKPLAHHIPV R L C T K I 3 0 0 2 1 0 0 1 0 1 1 1 0 0 0 0 2 0 2 0 0 0 14 0 1560.713 P55145 P55145 74 87 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 2 4.4978E-08 186.74 By MS/MS 10 0 1 1 498080 498080 0 8030 1028 8311 19988 14082 14082 1 529410 0 LDAEPRPPPTQEAA HKVNLQMVYDSPLCRLDAEPRPPPTQEAA_ RLDAEPRPPPTQEAA_______________ R L D A A - 3 1 0 1 0 1 2 0 0 0 1 0 0 0 4 0 1 0 0 0 0 0 14 1 1490.7365 Q9Y285 Q9Y285 495 508 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2 0.027006 109.72 By MS/MS 6 0 1 1 6471000 6471000 0 8031 2876 8312 19989 14083 14083 1 50461 0 LDAIEDLMVVPDK WLCAPLCNHYAINDRLDAIEDLMVVPDKIS DRLDAIEDLMVVPDKISEVVELLKKLPDLE R L D D K I 1 0 0 3 0 0 1 0 0 1 2 1 1 0 1 0 0 0 0 2 0 0 13 0 1456.7483 P52701 P52701 792 804 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.048797 72.531 By MS/MS 3 0 1 1 118200 118200 0 8032 989 8313 19990 14084 14084 1 3085.7 0 LDALEIACEVR GLFKTDRVLGTAQLKLDALEIACEVREILE AQLKLDALEIACEVREILEVLDGRRPTGGR K L D V R E 2 1 0 1 1 0 2 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1287.6493 Q6P1N0 Q6P1N0 758 768 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.00093157 134.57 By MS/MS 3.5 0.5 1 1 2 618800 618800 0 8033 1702 8314 19991;19992 14085 14085 1 16752 0 LDALLAELR AFEFVLKADDDSFARLDALLAELRAREPAR DDSFARLDALLAELRAREPARRRRLYWGFF R L D L R A 2 1 0 1 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5917 Q96L58 Q96L58 163 171 B3GALT6 Beta-1,3-galactosyltransferase 6 yes yes 2 0.0011492 138.98 By MS/MS 7.5 0.5 1 1 2 832380 832380 0 8034 2223 8315 19993;19994 14086;14087 14086 2 35530 0 LDCAQLK YQYQVVLVEPKTAWRLDCAQLKEKNQWQLS VEPKTAWRLDCAQLKEKNQWQLSADDLKKL R L D L K E 1 0 0 1 1 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 846.42694 P09543 P09543 156 162 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.022143 120.49 By MS/MS 7 0 1 1 2694400 2694400 0 8035 516 8316 19995 14088 14088 1 48149 0 LDCLIEVYR GISQVVPVFQSAKPRLDCLIEVYRSCQEIL QSAKPRLDCLIEVYRSCQEILAHQKATSTS R L D Y R S 0 1 0 1 1 0 1 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1179.5958 Q14442 Q14442 164 172 PIGH Phosphatidylinositol N-acetylglucosaminyltransferase subunit H yes yes 2 0.0010286 141.48 By MS/MS 9 0 1 1 340600 340600 0 8036 1431 8317 19996 14089 14089 1 195470 0 LDDCGLTEAR WAELLPLLQQCQVVRLDDCGLTEARCKDIS CQVVRLDDCGLTEARCKDISSALRVNPALA R L D A R C 1 1 0 2 1 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1148.5132 P13489 P13489 35 44 RNH1 Ribonuclease inhibitor yes yes 2 0.00030264 166.07 By MS/MS 7.75 1.48 1 1 1 1 4 10901000 10901000 0 8037 574 8318 19997;19998;19999;20000 14090;14091 14090 2 357060 0 LDDDPPPSTLLK QAARGYVVRKPAQSRLDDDPPPSTLLKDYQ QSRLDDDPPPSTLLKDYQNVPGIEKVDDVV R L D L K D 0 0 0 3 0 0 0 0 0 0 3 1 0 0 3 1 1 0 0 0 0 0 12 0 1309.6765 P82914 P82914 63 74 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 7.8457E-05 159.79 By MS/MS 8.5 0.5 1 1 2 4700500 4700500 0 8038 1207 8319 20001;20002 14092;14093;14094 14093 3 2434800 0 LDDIFEPVLIPEPK NGTVRCEMPELVQHKLDDIFEPVLIPEPKI KLDDIFEPVLIPEPKIRAVSPHFDDMHSNT K L D P K I 0 0 0 2 0 0 2 0 0 2 2 1 0 1 3 0 0 0 0 1 0 0 14 0 1623.876 Q14008 Q14008 1510 1523 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0051993 119.74 By MS/MS 3 0.816 1 1 1 3 459730 459730 0 8039 1405 8320 20003;20004;20005 14095;14096 14095 2 17132 0 LDDLFLK SAKALYEHLTAKNTKLDDLFLKRYASLLKY HLTAKNTKLDDLFLKRYASLLKYAGEPVPF K L D L K R 0 0 0 2 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 7 0 862.48002 P42704 P42704 1351 1357 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.012549 146.94 By MS/MS 4 0.816 1 1 1 3 4239700 4239700 0 8040 854 8321 20006;20007;20008 14097 14097 1 111820 0 LDDLVNWAR VAPKPSSRGEYVVAKLDDLVNWARRSSLWP EYVVAKLDDLVNWARRSSLWPMTFGLACCA K L D A R R 1 1 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 9 0 1100.5615 O75251 O75251 67 75 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2 4.3563E-06 180.03 By MS/MS 9.5 0.5 1 1 2 4992000 4992000 0 8041 293 8322 20009;20010 14098;14099 14098 2 3179000 0 LDDQIFLNR VRRQAQQVIQKGITRLDDQIFLNRNPGVPS QKGITRLDDQIFLNRNPGVPSVVKFHPFTP R L D N R N 0 1 1 2 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1132.5877 Q8N122 Q8N122 1013 1021 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.00013636 168.25 By MS/MS 3 0 1 1 771550 771550 0 8042 1891 8323 20011 14100 14100 1 20141 0 LDDSLLYLR NPRVQEIQVVKLEKRLDDSLLYLRDALPEY VKLEKRLDDSLLYLRDALPEYSTFDVNMKP R L D L R D 0 1 0 2 0 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 9 0 1106.5972 P49406 P49406 183 191 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 1.4736E-06 190.51 By MS/MS 8 0 1 1 3029200 3029200 0 8043 917 8324 20012 14101 14101 1 199840 0 LDDTYSFQVINK NIMSIFTFMGANVMRLDDTYSFQVINKTVK VMRLDDTYSFQVINKTVKMVIPALIQSDSG R L D N K T 0 0 1 2 0 1 0 0 0 1 1 1 0 1 0 1 1 0 1 1 0 0 12 0 1441.7089 Q9H583 Q9H583 1337 1348 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.00023179 183.85 By MS/MS 2 0.816 1 1 1 3 662390 662390 0 8044 2503 8325 20013;20014;20015 14102 14102 1 27856 0 LDECEEAFQGTK NSHDGLDGPTYKKRRLDECEEAFQGTKVFV KRRLDECEEAFQGTKVFVMPNGMLKSNQQL R L D T K V 1 0 0 1 1 1 3 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 12 0 1425.6082 P61289 P61289 89 100 PSME3 Proteasome activator complex subunit 3 yes yes 2 3.9589E-33 263.3 By MS/MS 8 0 1 1 2296500 2296500 0 8045 1096 8326 20016 14103 14103 1 151500 0 LDEDLAAYCR ITPGARGAFSEEYKRLDEDLAAYCRRRDIR EEYKRLDEDLAAYCRRRDIRILVLDDTNHE R L D C R R 2 1 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1224.5445 P09543 P09543 103 112 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.00016083 158.76 By MS/MS 7 0 1 1 4895700 4895700 0 8046 516 8327 20017 14104 14104 1 87487 0 LDEFGEQLSK EMVATEQERTPLQQKLDEFGEQLSKVISLI PLQQKLDEFGEQLSKVISLICIAVWIINIG K L D S K V 0 0 0 1 0 1 2 1 0 0 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1164.5663 P16615;O14983 P16615 253 262 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 8.1608E-22 246.93 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 19170000 19170000 0 8047 608 8328 20018;20019;20020;20021;20022;20023 14105;14106;14107;14108;14109 14107 5 565300 0 LDELEELLTNNR LMDDIYQFSKNFSLRLDELEELLTNNRIWR SLRLDELEELLTNNRIWRNRTIDIGVVTAE R L D N R I 0 1 2 1 0 0 3 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 12 0 1457.7362 O75306 O75306 255 266 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2;3 2.6141E-17 266.03 By MS/MS 7 0.707 1 2 1 4 15726000 15726000 0 8048 294 8329 20024;20025;20026;20027 14110;14111;14112 14110 3 293380 0 LDFEEFMK EEKIFTTGDVNKDGKLDFEEFMKYLKDHEK DVNKDGKLDFEEFMKYLKDHEKKMKLAFKS K L D M K Y 0 0 0 1 0 0 2 0 0 0 1 1 1 2 0 0 0 0 0 0 0 0 8 0 1057.479 Q6NUK1 Q6NUK1 75 82 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.007082 133.12 By MS/MS 7 0 1 1 0 0 0 8049 1690 8330 20028 14113 14113 1 0 0 LDFIESDSPCSSEALSK LPEGEDVHNFLLEQKLDFIESDSPCSSEAL FIESDSPCSSEALSKKELSAEELYKRLEKL K L D S K K 1 0 0 2 1 0 2 0 0 1 2 1 0 1 1 5 0 0 0 0 0 0 17 0 1883.8459 O43432 O43432 1402 1418 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 1.3997E-13 179.67 By MS/MS 2 0 1 1 149960 149960 0 8050 200 8331 20029 14114 14114 1 7453.7 0 LDFNLIR ILARNIPEDNADMARLDFNLIRVVACNLYP EDNADMARLDFNLIRVVACNLYPFVKTVAS R L D I R V 0 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 7 0 889.50215 P31939 P31939 91 97 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.018671 130.04 By MS/MS 5.5 0.5 1 1 2 2240100 2240100 0 8051 757 8332 20030;20031 14115 14115 1 20378 0 LDFSITK AAFYILFFTVIIYVRLDFSITKDPAAEARM FTVIIYVRLDFSITKDPAAEARMKVACITE R L D T K D 0 0 0 1 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 7 0 822.44872 P04843 P04843 459 465 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.015168 139.68 By MS/MS 5 0 1 1 963280 963280 0 8052 458 8333 20032 14116 14116 1 39595 0 LDFSITKDPAAEAR AAFYILFFTVIIYVRLDFSITKDPAAEARM RLDFSITKDPAAEARMKVACITEQVLTLVN R L D A R M 3 1 0 2 0 0 1 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 14 1 1532.7835 P04843 P04843 459 472 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 3 0.0019559 118.24 By MS/MS 4.5 0.5 1 1 2 3147700 3147700 0 8053 458 8334 20033;20034 14117 14117 1 128370 0 LDGAHAPELTK VPTFLFFKNSQKIDRLDGAHAPELTKKVQR KIDRLDGAHAPELTKKVQRHASSGSFLPSA R L D T K K 2 0 0 1 0 0 1 1 1 0 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1150.5982 O76003 O76003 100 110 GLRX3 Glutaredoxin-3 yes yes 2 0.0045003 109.83 By MS/MS 7 0 1 1 645770 645770 0 8054 342 8335 20035 14118 14118 1 11540 0 LDGDVLMK KNAPKEASRLKSILKLDGDVLMKDVQEIAT RLKSILKLDGDVLMKDVQEIATVVVPKPKH K L D M K D 0 0 0 2 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 1 0 0 8 0 889.4579 Q9BRT6 Q9BRT6 35 42 LLPH Protein LLP homolog yes yes 2 0.021712 139.68 By MS/MS 8 0 1 1 100680 100680 0 8055 2330 8336 20036 14119 14119 1462 0 6641.6 0 LDGEIIPHIPANQEVLNK ILDMFTEIKVGVAYKLDGEIIPHIPANQEV EIIPHIPANQEVLNKVEVQYKTLPGWNTDI K L D N K V 1 0 2 1 0 1 2 1 1 3 2 1 0 0 2 0 0 0 0 1 0 0 18 0 1999.0738 P30520 P30520 380 397 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 3 0.0032409 121.95 By MS/MS 7 0 1 1 1898600 1898600 0 8056 742 8337 20037 14120 14120 1 33928 0 LDGFSVLMR CLVREQEAGLLQFLRLDGFSVLMRAMQQQV LLQFLRLDGFSVLMRAMQQQVQKLKVKSAF R L D M R A 0 1 0 1 0 0 0 1 0 0 2 0 1 1 0 1 0 0 0 1 0 0 9 0 1036.5376 Q9NZL4 Q9NZL4 229 237 HSPBP1 Hsp70-binding protein 1 yes yes 2 5.8812E-05 171.53 By MS/MS 7.5 0.5 1 1 2 1957000 1957000 0 8057 2713 8338 20038;20039 14121;14122 14121 1582 2 76618 0 LDGGFAAVSR LSYTEGLSLVYMAARLDGGFAAVSRAFHEI YMAARLDGGFAAVSRAFHEIRARNPAFQPQ R L D S R A 2 1 0 1 0 0 0 2 0 0 1 0 0 1 0 1 0 0 0 1 0 0 10 0 991.50869 Q9H7H0 Q9H7H0 163 172 METTL17 Methyltransferase-like protein 17, mitochondrial yes yes 2 0.045697 79.974 By MS/MS 6 0.816 1 1 1 3 3216700 3216700 0 8058 2517 8339 20040;20041;20042 14123 14123 1 54487 0 LDGGLDLLLR AVGREVAQGLCDAIRLDGGLDLLLRLLQAP CDAIRLDGGLDLLLRLLQAPELETRVQAAR R L D L R L 0 1 0 2 0 0 0 2 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 1083.6288 Q6SZW1 Q6SZW1 122 131 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 4.9015E-07 189.38 By MS/MS 5 0 1 1 662760 662760 0 8059 1725 8340 20043 14124 14124 1 27242 0 LDGLVETPTGYIESLPR QMMQNPQILAALQERLDGLVETPTGYIESL GLVETPTGYIESLPRVVKRRVNALKNLQVK R L D P R V 0 1 0 1 0 0 2 2 0 1 3 0 0 0 2 1 2 0 1 1 0 0 17 0 1858.9676 P55209 P55209 56 72 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2 4.2467E-25 224.25 By MS/MS 7.5 1.12 1 1 1 1 4 30102000 30102000 0 8060 1030 8341 20044;20045;20046;20047 14125 14125 1 297390 0 LDGNLLTQPGQAR LWLSVTCLIPFDFSRLDGNLLTQPGQARMS SRLDGNLLTQPGQARMSIMDRILQIAESYL R L D A R M 1 1 1 1 0 2 0 2 0 0 3 0 0 0 1 0 1 0 0 0 0 0 13 0 1381.7314 Q9BTW9 Q9BTW9 170 182 TBCD Tubulin-specific chaperone D yes yes 2 5.0007E-08 191.33 By MS/MS 3 0.816 1 1 1 3 4637900 4637900 0 8061 2354 8342 20048;20049;20050 14126;14127 14127 2 140530 0 LDHKFDLMYAK CMLSNTTAIAEAWARLDHKFDLMYAKRAFV AWARLDHKFDLMYAKRAFVHWYVGEGMEEG R L D A K R 1 0 0 2 0 0 0 0 1 0 2 2 1 1 0 0 0 0 1 0 0 0 11 1 1379.6908 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;A6NHL2;P68366 P68363 391 401 TUBA1B;TUBA1A;TUBA1C;TUBAL3;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 2;3;4 7.0219E-06 178.84 By MS/MS 6.48 2.15 1 1 1 2 6 4 2 2 2 21 473940000 473940000 0 8062 1185;1754;2314;1186;22 8343;8344 20051;20052;20053;20054;20055;20056;20057;20058;20059;20060;20061;20062;20063;20064;20065;20066;20067;20068;20069;20070;20071 14128;14129;14130;14131;14132;14133;14134;14135;14136;14137 14135 6 10 5825400 0 LDHKFDLMYAKR CMLSNTTAIAEAWARLDHKFDLMYAKRAFV WARLDHKFDLMYAKRAFVHWYVGEGMEEGE R L D K R A 1 1 0 2 0 0 0 0 1 0 2 2 1 1 0 0 0 0 1 0 0 0 12 2 1535.7919 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;A6NHL2;P68366 P68363 391 402 TUBA1B;TUBA1A;TUBA1C;TUBAL3;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 4 0.028144 65.695 By MS/MS 8 0.816 1 1 1 3 1600700 1600700 0 8063 1185;1754;2314;1186;22 8345 20072;20073;20074 14138 14138 6 1 117120 0 LDIDPETITWQR DPTTLTDEEINRFARLDIDPETITWQRVLD FARLDIDPETITWQRVLDTNDRFLRKITIG R L D Q R V 0 1 0 2 0 1 1 0 0 2 1 0 0 0 1 0 2 1 0 0 0 0 12 0 1485.7464 P11586 P11586 521 532 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 8.8046E-19 225.22 By MS/MS 4.5 0.5 1 1 2 773470 773470 0 8064 556 8346 20075;20076 14139;14140 14139 2 31793 0 LDIDPSTITWQR DPSTLTEEEVSKFARLDIDPSTITWQRVLD FARLDIDPSTITWQRVLDTNDRFLRKITIG R L D Q R V 0 1 0 2 0 1 0 0 0 2 1 0 0 0 1 1 2 1 0 0 0 0 12 0 1443.7358 Q6UB35 Q6UB35 564 575 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 4.5493E-07 186.87 By MS/MS By MS/MS 4.4 1.02 1 2 1 1 4 1 13124000 13061000 62880 8065 1726 8347 20077;20078;20079;20080;20081 14141;14142;14143;14144;14145 14143 5 352470 131390 LDIDSPPITAR LHAAMADTFLEHMCRLDIDSPPITARNTGI HMCRLDIDSPPITARNTGIICTIGPASRSV R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 P14618 P14618 33 43 PKM Pyruvate kinase PKM yes yes 2 9.3586E-07 179.1 By MS/MS 4.17 2.11 1 1 1 1 1 1 6 12326000 12326000 0 8066 588 8348 20082;20083;20084;20085;20086;20087 14146;14147 14146 2 133370 0 LDIKLDSEDKDK IMNFKKEETAKLIEKLDIKLDSEDKDKEGK IEKLDIKLDSEDKDKEGKPLLKAVMRRWLP K L D D K E 0 0 0 4 0 0 1 0 0 1 2 3 0 0 0 1 0 0 0 0 0 0 12 2 1417.73 P13639 P13639 319 330 EEF2 Elongation factor 2 yes yes 3 0.026891 77.74 By MS/MS 4.5 0.5 1 1 2 2889400 2889400 0 8067 576 8349 20088;20089 14148 14148 1 84126 0 LDILDMFTEIK YAHMINGFTALALTKLDILDMFTEIKVGVA ALTKLDILDMFTEIKVGVAYKLDGEIIPHI K L D I K V 0 0 0 2 0 0 1 0 0 2 2 1 1 1 0 0 1 0 0 0 0 0 11 0 1336.6948 P30520 P30520 363 373 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 6.4467E-05 182.46 By MS/MS 6.5 0.5 2 2 4 1653300 1653300 0 8068 742 8350;8351 20090;20091;20092;20093 14149;14150 14149 501 2 24547 0 LDILELLEK QSAQTPVVIIGLTCRLDILELLEKRVKSRF IGLTCRLDILELLEKRVKSRFSHRQIHLMN R L D E K R 0 0 0 1 0 0 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 9 0 1084.638 CON__Q2YDI2;O43929 CON__Q2YDI2 196 204 ORC4 Origin recognition complex subunit 4 yes no 2 0.0086147 118.18 By MS/MS 6.5 0.5 1 1 2 172070 172070 0 + 8069 56 8352 20094;20095 14151 14151 1 2522.5 0 LDILLGTAR HCQTQACPPLSWPQRLDILLGTARAIQFLH LSWPQRLDILLGTARAIQFLHQDSPSLIHG R L D A R A 1 1 0 1 0 0 0 1 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 970.58113 P51617 P51617 316 324 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 0.00079651 146.69 By MS/MS 5.5 0.5 1 1 2 989880 989880 0 8070 971 8353 20096;20097 14152 14152 1 36319 0 LDKAQIHDLVLVGGSTR RSTLEPVEKALRDAKLDKAQIHDLVLVGGS KAQIHDLVLVGGSTRIPKVQKLLQDFFNGR K L D T R I 1 1 0 2 0 1 0 2 1 1 3 1 0 0 0 1 1 0 0 2 0 0 17 1 1821.0108 P0DMV9;P0DMV8 P0DMV9 326 342 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.00011079 129.88 By MS/MS 5.5 0.5 1 1 2 4954900 4954900 0 8071 528 8354 20098;20099 14153 14153 1 120470 0 LDKSQIHDIVLVGGSTR RGTLDPVEKALRDAKLDKSQIHDIVLVGGS KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK K L D T R I 0 1 0 2 0 1 0 2 1 2 2 1 0 0 0 2 1 0 0 2 0 0 17 1 1837.0058 P11142 P11142 326 342 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3;4 3.0136E-10 184.02 By MS/MS 5.71 0.7 3 3 1 7 21283000 21283000 0 8072 546 8355 20100;20101;20102;20103;20104;20105;20106 14154;14155;14156;14157 14156 4 573760 0 LDLAGRDLTDYLMK VPIYEGYALPHAILRLDLAGRDLTDYLMKI RLDLAGRDLTDYLMKILTERGYSFTTTAER R L D M K I 1 1 0 3 0 0 0 1 0 0 4 1 1 0 0 0 1 0 1 0 0 0 14 1 1622.8338 P60709;P63267;P68133;P68032;P62736;P63261;Q562R1 P60709 178 191 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 3 0.0051305 92.151 By MS/MS 7 0.816 1 1 1 3 3151900 3151900 0 8073 1072;1179;1593 8356 20107;20108;20109 14158 14158 835 1 59226 0 LDLDLTADSQPPVFK VSGLMRKVPRVSLERLDLDLTADSQPPVFK LDLDLTADSQPPVFKVFPGSTTEDYNLIVI R L D F K V 1 0 0 3 0 1 0 0 0 0 3 1 0 1 2 1 1 0 0 1 0 0 15 0 1657.8563 Q13263 Q13263 493 507 TRIM28 Transcription intermediary factor 1-beta yes yes 2 3.3746E-38 256.96 By MS/MS 4.5 1.12 1 1 1 1 4 4709900 4709900 0 8074 1351 8357 20110;20111;20112;20113 14159;14160 14159 2 104520 0 LDLFANVVHVK YKGELASYDMRLRRKLDLFANVVHVKSLPG LRRKLDLFANVVHVKSLPGYMTRHNNLDLV K L D V K S 1 0 1 1 0 0 0 0 1 0 2 1 0 1 0 0 0 0 0 3 0 0 11 0 1253.7132 O43837 O43837 136 146 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 3 0.012965 104.43 By MS/MS 7 0 1 1 310690 310690 0 8075 230 8358 20114 14161 14161 1 5552 0 LDLIHESILHK IKMLGNIKFIGELGKLDLIHESILHKCIKT ELGKLDLIHESILHKCIKTLLEKKKRVQLK K L D H K C 0 0 0 1 0 0 1 0 2 2 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1316.7452 P78344 P78344 220 230 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 3 0.012994 85.813 By MS/MS 4 0 1 1 684220 684220 0 8076 1192 8359 20115 14162 14162 1 18678 0 LDLLLEK KQQEALEEQAALEPKLDLLLEKTKELQKLI EQAALEPKLDLLLEKTKELQKLIEADISKR K L D E K T 0 0 0 1 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 7 0 842.51132 Q96JB5 Q96JB5 472 478 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.015168 139.68 By MS/MS 5.5 0.5 1 1 2 3199000 3199000 0 8077 2206 8360 20116;20117 14163 14163 1 123500 0 LDLLSDTNMVDFAMDVYK SVKEIYNEKELLQGKLDLLSDTNMVDFAMD LSDTNMVDFAMDVYKNLYSDDIPHALREKR K L D Y K N 1 0 1 4 0 0 0 0 0 0 3 1 2 1 0 1 1 0 1 2 0 0 18 0 2088.9748 P60228 P60228 42 59 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 3.8668E-14 184 By MS/MS 6 0 1 1 468450 468450 0 8078 1065 8361 20118 14164 14164 827 1 3653 0 LDMSEFQER TAKYMHKDAKKGFIRLDMSEFQERHEVAKF KKGFIRLDMSEFQERHEVAKFIGSPPGYVG R L D E R H 0 1 0 1 0 1 2 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 9 0 1153.5074 Q9H078 Q9H078 409 417 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.0025995 123.35 By MS/MS 6 0 1 1 2790200 2790200 0 8079 2448 8362 20119 14165 14165 1 21758 0 LDNIFLTR GVQRLMQEHKLKVARLDNIFLTRMHWSNVG HKLKVARLDNIFLTRMHWSNVGGLSGMILT R L D T R M 0 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 8 0 990.54983 Q9BQ52 Q9BQ52 105 112 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.017928 109.44 By MS/MS 4.5 0.5 1 1 2 1874200 1874200 0 8080 2305 8363 20120;20121 14166;14167 14166 2 55486 0 LDNIYSSDK NSLNIAGLSLDFSSKLDNIYSSDKFYKQTV LDFSSKLDNIYSSDKFYKQTVNLQLQPYSL K L D D K F 0 0 1 2 0 0 0 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 9 0 1053.4979 P04114 P04114 1770 1778 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 0.037404 86.898 By MS/MS 3 1.41 1 1 1 1 1 5 1127100 1127100 0 8081 445 8364 20122;20123;20124;20125;20126 14168 14168 1 42297 0 LDNIYSSDKFYK NSLNIAGLSLDFSSKLDNIYSSDKFYKQTV SSKLDNIYSSDKFYKQTVNLQLQPYSLVTT K L D Y K Q 0 0 1 2 0 0 0 0 0 1 1 2 0 1 0 2 0 0 2 0 0 0 12 1 1491.7246 P04114 P04114 1770 1781 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2;3 0.014153 111.86 By MS/MS 2.33 1.89 2 1 3 859690 859690 0 8082 445 8365 20127;20128;20129 14169;14170;14171 14169 1 38311 0 LDNLLLDTEGYVK LQFLHEHKIVYRDLKLDNLLLDTEGYVKIA LKLDNLLLDTEGYVKIADFGLCKEGMGYGD K L D V K I 0 0 1 2 0 0 1 1 0 0 4 1 0 0 0 0 1 0 1 1 0 0 13 0 1491.7821 Q16512 Q16512 743 755 PKN1 Serine/threonine-protein kinase N1 yes yes 2 0.00036611 133.88 By MS/MS 4 0 1 1 0 0 0 8083 1534 8366 20130 14172 14172 1 0 0 LDNQAVTEEELSR RYRMTVLRTLPRLQKLDNQAVTEEELSRAL QKLDNQAVTEEELSRALSEGEEITAAPERE K L D S R A 1 1 1 1 0 1 3 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1502.7213 O43822 O43822 121 133 C21orf2 Protein C21orf2 yes yes 2 2.887E-05 166.24 By MS/MS 8.5 0.5 1 1 2 887150 887150 0 8084 227 8367 20131;20132 14173 14173 1 103370 0 LDNTLEEIIFK CGNQVHETNPLEMLRLDNTLEEIIFKLVPG EMLRLDNTLEEIIFKLVPGLREQELERESE R L D F K L 0 0 1 1 0 0 2 0 0 2 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1333.7129 Q86SE9 Q86SE9 71 81 PCGF5 Polycomb group RING finger protein 5 yes yes 2 1.8816E-08 195.27 By MS/MS 8 0 1 1 171510 171510 0 8085 1811 8368 20133 14174;14175 14175 2 11315 0 LDPETLESLGLIK LACLYLVSDTVLKERLDPETLESLGLIKQS ERLDPETLESLGLIKQSQQFNQKSVKIKTK R L D I K Q 0 0 0 1 0 0 2 1 0 1 4 1 0 0 1 1 1 0 0 0 0 0 13 0 1426.7919 Q8NI27 Q8NI27 127 139 THOC2 THO complex subunit 2 yes yes 2 8.5039E-05 155.97 By MS/MS 4 0.816 1 1 1 3 729700 729700 0 8086 1976 8369 20134;20135;20136 14176 14176 1 19729 0 LDPGAVSDVPEAIK KNTEAIGNEVTRLVRLDPGAVSDVPEAIKF RLDPGAVSDVPEAIKFLVTWHTIDADAPEL R L D I K F 2 0 0 2 0 0 1 1 0 1 1 1 0 0 2 1 0 0 0 2 0 0 14 0 1409.7402 P42356 P42356 1578 1591 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.024085 94.402 By MS/MS 2 0.816 1 1 1 3 1499400 1499400 0 8087 850 8370 20137;20138;20139 14177 14177 1 61986 0 LDPGSEETQTLVR SPDWQVDYESYTWRKLDPGSEETQTLVREY RKLDPGSEETQTLVREYFSWEGAFQHVGKA K L D V R E 0 1 0 1 0 1 2 1 0 0 2 0 0 0 1 1 2 0 0 1 0 0 13 0 1443.7205 P26641 P26641 402 414 EEF1G Elongation factor 1-gamma yes yes 2 0.001952 120.03 By MS/MS 8 1.58 1 1 1 1 4 43015000 43015000 0 8088 700 8371 20140;20141;20142;20143 14178;14179;14180 14178 3 1002200 0 LDPILCDCILEK KKNDLVDADNKNLVRLDPILCDCILEKNEQ LVRLDPILCDCILEKNEQHTVMKLPWDSLL R L D E K N 0 0 0 2 2 0 1 0 0 2 3 1 0 0 1 0 0 0 0 0 0 0 12 0 1487.7364 P41214 P41214 435 446 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.00063225 121.36 By MS/MS 5 0 1 1 0 0 0 8089 837 8372 20144 14181 14181 1 0 0 LDPSIFESLQK VIIGLKTAKGTKQLKLDPSIFESLQKERVE KQLKLDPSIFESLQKERVEAGDVIYIEANS K L D Q K E 0 0 0 1 0 1 1 0 0 1 2 1 0 1 1 2 0 0 0 0 0 0 11 0 1275.6711 Q9Y265 Q9Y265 172 182 RUVBL1 RuvB-like 1 yes yes 2 3.3681E-05 171.85 By MS/MS By matching 6.33 0.471 2 1 2 1 29526000 29503000 23300 8090 2870 8373 20145;20146;20147 14182;14183;14184 14182 3 240060 71459 LDQAVLDLQR KALYRRSQALEKLGRLDQAVLDLQRCVSLE EKLGRLDQAVLDLQRCVSLEPKNKVFQEAL R L D Q R C 1 1 0 2 0 2 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 10 0 1169.6404 Q9H3U1 Q9H3U1 108 117 UNC45A Protein unc-45 homolog A yes yes 2 9.9304E-11 206.73 By MS/MS 4.5 0.5 1 1 2 3835000 3835000 0 8091 2493 8374 20148;20149 14185 14185 1 107560 0 LDQLIYIPLPDEK NRPDIIDPAILRPGRLDQLIYIPLPDEKSR GRLDQLIYIPLPDEKSRVAILKANLRKSPV R L D E K S 0 0 0 2 0 1 1 0 0 2 3 1 0 0 2 0 0 0 1 0 0 0 13 0 1555.8498 P55072 P55072 639 651 VCP Transitional endoplasmic reticulum ATPase yes yes 2 4.2815E-05 161.1 By MS/MS 6.17 2.11 1 1 1 1 1 1 6 16417000 16417000 0 8092 1026 8375 20150;20151;20152;20153;20154;20155 14186;14187;14188;14189;14190;14191 14187 6 457370 0 LDQLIYIPLPDEKSR NRPDIIDPAILRPGRLDQLIYIPLPDEKSR LDQLIYIPLPDEKSRVAILKANLRKSPVAK R L D S R V 0 1 0 2 0 1 1 0 0 2 3 1 0 0 2 1 0 0 1 0 0 0 15 1 1798.9829 P55072 P55072 639 653 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0025388 102.38 By MS/MS 4 0 1 1 274870 274870 0 8093 1026 8376 20156 14192 14192 1 7503.5 0 LDQNFLNGIIDR VKNRVWQTLLVLFPRLDQNFLNGIIDRIFQ FPRLDQNFLNGIIDRIFQAGFTNNQASIKY R L D D R I 0 1 2 2 0 1 0 1 0 2 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1416.7361 Q13395 Q13395 1183 1194 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.0013141 129.74 By MS/MS 3 0 1 1 115920 115920 0 8094 1362 8377 20157 14193 14193 1 3026 0 LDQPMTEIVSR MLYSFFMPAAKLKERLDQPMTEIVSRVSKR LKERLDQPMTEIVSRVSKRKLGRHVRALVL R L D S R V 0 1 0 1 0 1 1 0 0 1 1 0 1 0 1 1 1 0 0 1 0 0 11 0 1287.6493 P22314 P22314 1011 1021 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 3 0.03263 70.808 By MS/MS 4 0 1 1 1544300 1544300 0 8095 658 8378 20158 14194 14194 443 0 42157 0 LDQQTLPLGGR VPKSEAEQKLPLGTRLDQQTLPLGGRELSQ LGTRLDQQTLPLGGRELSQGLLPLPQPYQA R L D G R E 0 1 0 1 0 2 0 2 0 0 3 0 0 0 1 0 1 0 0 0 0 0 11 0 1196.6513 P98175 P98175 253 263 RBM10 RNA-binding protein 10 yes yes 2 0.0022355 119.34 By MS/MS 4.33 1.25 1 1 1 3 467070 0 467070 8096 1225 8379 20159;20160;20161 14195;14196 14195 2 0 933920 LDQVSSEIKEK KHGMKVVLISRSKDKLDQVSSEIKEKFKVE SKDKLDQVSSEIKEKFKVETRTIAVDFASE K L D E K F 0 0 0 1 0 1 2 0 0 1 1 2 0 0 0 2 0 0 0 1 0 0 11 1 1274.6718 Q53GQ0 Q53GQ0 87 97 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 0.00085507 152.04 By MS/MS 8 0 2 2 5593600 5593600 0 8097 1584 8380 20162;20163 14197;14198 14198 2 369010 0 LDRLDLAR DSLECTAMTVQILLKLDRLDLARKELKRMQ TVQILLKLDRLDLARKELKRMQDLDEDATL K L D A R K 1 2 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 1 970.55598 O14579 O14579 159 166 COPE Coatomer subunit epsilon yes yes 3 0.016623 96.668 By MS/MS 8 0 1 1 2213700 2213700 0 8098 115 8381 20164 14199 14199 1 146040 0 LDSELKNMQDMVEDYR NLRRRVDQLKSDQSRLDSELKNMQDMVEDY DSELKNMQDMVEDYRNKYEDEINKRTNAEN R L D Y R N 0 1 1 3 0 1 2 0 0 0 2 1 2 0 0 1 0 0 1 1 0 0 16 1 1984.887 P04264;CON__P04264 P04264 252 267 KRT1 Keratin, type II cytoskeletal 1 no no 3 9.7901E-05 126.16 By MS/MS By MS/MS 5.91 2.81 1 2 1 1 1 1 1 2 1 3 8 4097000 1775100 2321900 + 8099 450;45 8382 20165;20166;20167;20168;20169;20170;20171;20172;20173;20174;20175 14200;14201;14202;14203;14204;14205;14206;14207;14208 14201 27;28 8 510900 7317800 LDSIVIQQGR TVEERIVERAEMKLRLDSIVIQQGRLVDQN EMKLRLDSIVIQQGRLVDQNLNKIGKDEML R L D G R L 0 1 0 1 0 2 0 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1127.6299 O60264;P28370 O60264 627 636 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 8.5856E-07 187.22 By MS/MS 2.5 1.12 1 1 1 1 4 1466600 1466600 0 8100 240;720 8383 20176;20177;20178;20179 14209 14209 1 43126 0 LDSLQTLNACCAVYGQK PLLIEKVDSEVLSAKLDSLQTLNACCAVYG SLQTLNACCAVYGQKELKDFLPSLWASIRR K L D Q K E 2 0 1 1 2 2 0 1 0 0 3 1 0 0 0 1 1 0 1 1 0 0 17 0 1939.9132 Q96T76 Q96T76 276 292 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 4.7089E-34 249.98 By MS/MS 4 0 1 1 771880 771880 0 8101 2261 8384 20180 14210 14210 1 21072 0 LDSPAGTALSPSGHTK VSPAAIKKTILDKVKLDSPAGTALSPSGHT DSPAGTALSPSGHTKLLPRSLAPAGKD___ K L D T K L 2 0 0 1 0 0 0 2 1 0 2 1 0 0 2 3 2 0 0 0 0 0 16 0 1537.7736 P32322 P32322 292 307 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2;3 2.8546E-10 203.88 By MS/MS By matching 8 0 3 2 1 9791500 9766700 24862 8102 764 8385 20181;20182;20183 14211;14212 14212 2 644300 212110 LDSQKHIDFSLR RVRKQVVNIPSFIVRLDSQKHIDFSLRSPY IVRLDSQKHIDFSLRSPYGGGRPGRVKRKN R L D L R S 0 1 0 2 0 1 0 0 1 1 2 1 0 1 0 2 0 0 0 0 0 0 12 1 1457.7627 P46781 P46781 151 162 RPS9 40S ribosomal protein S9 yes yes 3;4 0.017674 101.72 By MS/MS 8.67 0.471 1 2 3 2686900 2686900 0 8103 887 8386 20184;20185;20186 14213;14214 14214 2 1374000 0 LDSQLEILSPSR EDLLKAIFNIKFLARLDSQLEILSPSRSAR LARLDSQLEILSPSRSARVQFHLMELNRSV R L D S R S 0 1 0 1 0 1 1 0 0 1 3 0 0 0 1 3 0 0 0 0 0 0 12 0 1356.7249 Q53R41 Q53R41 643 654 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.013655 108.56 By MS/MS 5.5 0.5 1 1 2 1846200 1846200 0 8104 1590 8387 20187;20188 14215 14215 1 57057 0 LDSSAVLDTGK DKVEDALNLKEEFDRLDSSAVLDTGKYVGL EFDRLDSSAVLDTGKYVGLVRVLAKHGKLQ R L D G K Y 1 0 0 2 0 0 0 1 0 0 2 1 0 0 0 2 1 0 0 1 0 0 11 0 1104.5663 P42704 P42704 740 750 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 9.4324E-05 178.84 By MS/MS 3 1.41 1 1 1 1 1 5 26709000 26709000 0 8105 854 8388 20189;20190;20191;20192;20193 14216;14217;14218 14216 3 723180 0 LDSSAVLDTGKYVGLVR DKVEDALNLKEEFDRLDSSAVLDTGKYVGL SSAVLDTGKYVGLVRVLAKHGKLQDAINIL R L D V R V 1 1 0 2 0 0 0 2 0 0 3 1 0 0 0 2 1 0 1 3 0 0 17 1 1791.9731 P42704 P42704 740 756 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.0073766 81.327 By MS/MS 3.5 0.5 1 1 2 1255300 1255300 0 8106 854 8389 20194;20195 14219 14219 1 33022 0 LDSTQVGDFLGDSAR TSVEDIAQFLHQEERLDSTQVGDFLGDSAR LDSTQVGDFLGDSARFNKEVMYAYVDQLDF R L D A R F 1 1 0 3 0 1 0 2 0 0 2 0 0 1 0 2 1 0 0 1 0 0 15 0 1579.7478 Q9Y6D5 Q9Y6D5 688 702 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 7.4052E-08 206.46 By MS/MS 2.5 0.5 1 1 2 975340 975340 0 8107 3002 8390 20196;20197 14220 14220 1 36407 0 LDTAMWLSR GPQGAGAVQFMMTNKLDTAMWLSRLFTVYC FMMTNKLDTAMWLSRLFTVYCSALFVLPLL K L D S R L 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 1 1 0 0 0 0 9 0 1091.5434 P57088 P57088 23 31 TMEM33 Transmembrane protein 33 yes yes 2 0.00054498 146.69 By MS/MS 9 0 2 2 1689000 1689000 0 8108 1053 8391;8392 20198;20199 14221;14222 14221 817 2 969300 0 LDTHPAMVTVLEMGAAR NVLGSRVTNVKVTLRLDTHPAMVTVLEMGA THPAMVTVLEMGAARHFLRMQQLAKTQEER R L D A R H 3 1 0 1 0 0 1 1 1 0 2 0 2 0 1 0 2 0 0 2 0 0 17 0 1810.907 Q12931 Q12931 603 619 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 3 0.013833 85.469 By MS/MS 5 0 1 1 0 0 0 8109 1316 8393 20200 14223 14223 1044 1 0 0 LDTIFFAK QPGEEPAGSVVQDSRLDTIFFAKQVINNAC SVVQDSRLDTIFFAKQVINNACATQAIVSV R L D A K Q 1 0 0 1 0 0 0 0 0 1 1 1 0 2 0 0 1 0 0 0 0 0 8 0 953.52222 Q9Y5K5 Q9Y5K5 74 81 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 2 0.0007607 176.66 By MS/MS 7.5 0.5 1 1 2 2023400 2023400 0 8110 2971 8394 20201;20202 14224;14225 14225 2 74986 0 LDTSEVVFNSK GEEQGSDAALHFNPRLDTSEVVFNSKEQGS FNPRLDTSEVVFNSKEQGSWGREERGPGVP R L D S K E 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 2 1 0 0 2 0 0 11 0 1237.619 P47929 P47929 55 65 LGALS7 Galectin-7 yes yes 2 0.0022501 119.27 By MS/MS 7.5 0.5 1 1 2 1025200 0 1025200 8111 898 8395 20203;20204 14226 14226 1 0 8622100 LDVEEVDLSLR EPDEVLKEFVLPFLRLDVEEVDLSLRIFIQ PFLRLDVEEVDLSLRIFIQTLEANACREEY R L D L R I 0 1 0 2 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 11 0 1286.6718 P57678 P57678 662 672 GEMIN4 Gem-associated protein 4 yes yes 2 1.8963E-16 228.2 By MS/MS 4 0 1 1 679870 679870 0 8112 1054 8396 20205 14227 14227 1 18560 0 LDVGNAEVK ENDQLKKGAAVDGGKLDVGNAEVKLEEENR AVDGGKLDVGNAEVKLEEENRSLKADLQKL K L D V K L 1 0 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 0 943.49746 P51572 P51572 168 176 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.002636 122.96 By MS/MS By matching 8 0 2 1 1 2460800 2416800 43956 8113 969 8397 20206;20207 14228 14228 1 159440 375000 LDVGNAEVKLEEENR ENDQLKKGAAVDGGKLDVGNAEVKLEEENR LDVGNAEVKLEEENRSLKADLQKLKDELAS K L D N R S 1 1 2 1 0 0 4 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 15 1 1713.8533 P51572 P51572 168 182 BCAP31 B-cell receptor-associated protein 31 yes yes 2 4.9028E-05 178.22 By MS/MS 8 0 1 1 2504600 2504600 0 8114 969 8398 20208 14229 14229 1 165230 0 LDVGNFSWGSECCTR TVRVRGGNKKYRALRLDVGNFSWGSECCTR LDVGNFSWGSECCTRKTRIIDVVYNASNNE R L D T R K 0 1 1 1 2 0 1 2 0 0 1 0 0 1 0 2 1 1 0 1 0 0 15 0 1786.7403 P62241 P62241 60 74 RPS8 40S ribosomal protein S8 yes yes 2 2.4915E-63 303.04 By MS/MS 8.5 0.5 1 1 2 1447300 1447300 0 8115 1118 8399 20209;20210 14230 14230 1 141810 0 LDVTDLLADPVVR LFVRKHRDVIEKGRKLDVTDLLADPVVRIQ RKLDVTDLLADPVVRIQRKYYKISVVLMCF K L D V R I 1 1 0 3 0 0 0 0 0 0 3 0 0 0 1 0 1 0 0 3 0 0 13 0 1424.7875 Q86SK9 Q86SK9 174 186 SCD5 Stearoyl-CoA desaturase 5 yes yes 2 0.0014566 125.74 By MS/MS 7.5 0.5 1 1 2 538980 538980 0 8116 1812 8400 20211;20212 14231 14231 1 15832 0 LDVTSVEDYK LTCPFEPPKPKTKHKLDVTSVEDYKALQKY KTKHKLDVTSVEDYKALQKYEKEKFEEMIQ K L D Y K A 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 10 0 1167.5659 P48643 P48643 266 275 CCT5 T-complex protein 1 subunit epsilon yes yes 2 8.6944E-05 190.02 By MS/MS By matching 6 0 2 1 1 48126000 47980000 145590 8117 909 8401 20213;20214 14232 14232 1 374150 446520 LDVTSVEDYKALQK LTCPFEPPKPKTKHKLDVTSVEDYKALQKY KLDVTSVEDYKALQKYEKEKFEEMIQQIKE K L D Q K Y 1 0 0 2 0 1 1 0 0 0 2 2 0 0 0 1 1 0 1 2 0 0 14 1 1607.8407 P48643 P48643 266 279 CCT5 T-complex protein 1 subunit epsilon yes yes 2 2.766E-11 226.33 By MS/MS 6 0 1 1 4645300 4645300 0 8118 909 8402 20215 14233 14233 1 36224 0 LDVTTQTPLTPEQLR GTEQQGSHLNPEQLRLDVTTQTPLTPEQLR LDVTTQTPLTPEQLRAVENTVQEAVGQDEA R L D L R A 0 1 0 1 0 2 1 0 0 0 3 0 0 0 2 0 4 0 0 1 0 0 15 0 1710.9152 Q5JTZ9 Q5JTZ9 664 678 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 1.0956E-20 263.57 By MS/MS 5 1.41 1 1 1 1 1 5 22405000 22405000 0 8119 1611 8403 20216;20217;20218;20219;20220 14234;14235;14236 14234 3 627120 0 LDWEDVK LRKDPEPEDEVPDVKLDWEDVKTAQGMKRS EDEVPDVKLDWEDVKTAQGMKRSVWSNLKR K L D V K T 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 7 0 903.4338 P82675 P82675 406 412 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.022095 120.62 By MS/MS 7 0 1 1 1130100 1130100 0 8120 1205 8404 20221 14237 14237 1 20195 0 LDYEEVGACQK KLEASRDELQSRKVKLDYEEVGACQKEVLI RKVKLDYEEVGACQKEVLITWDKKLLNCRA K L D Q K E 1 0 0 1 1 1 2 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1310.5813 O60343 O60343 877 887 TBC1D4 TBC1 domain family member 4 yes yes 2 0.012243 96.342 By MS/MS 3 0 1 1 719890 719890 0 8121 246 8405 20222 14238 14238 1 18793 0 LDYILGLK RRLVRIGVLDEGKMKLDYILGLKIEDFLER LDEGKMKLDYILGLKIEDFLERRLQTQVFK K L D L K I 0 0 0 1 0 0 0 1 0 1 3 1 0 0 0 0 0 0 1 0 0 0 8 0 933.55352 P46781 P46781 94 101 RPS9 40S ribosomal protein S9 yes yes 2 0.0039198 143.11 By MS/MS 8.5 0.5 1 1 2 1003700 1003700 0 8122 887 8406 20223;20224 14239 14239 1 494320 0 LDYLSSLK FQGHGAGNLAGLKGRLDYLSSLKVKGLVLG LAGLKGRLDYLSSLKVKGLVLGPIHKNQKD R L D L K V 0 0 0 1 0 0 0 0 0 0 3 1 0 0 0 2 0 0 1 0 0 0 8 0 937.51205 P08195 P08195 248 255 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.013709 118.74 By MS/MS 4.5 0.5 1 1 2 4205800 4205800 0 8123 499 8407 20225;20226 14240;14241 14241 2 157980 0 LEAAEDIAYQLSR NSLATAGDGLIELRKLEAAEDIAYQLSRSR RKLEAAEDIAYQLSRSRNITYLPAGQSVLL K L E S R S 3 1 0 1 0 1 2 0 0 1 2 0 0 0 0 1 0 0 1 0 0 0 13 0 1477.7413 P35232 P35232 241 253 PHB Prohibitin yes yes 2 7.9234E-12 205.07 By MS/MS 8 0 1 1 479070 479070 0 8124 782 8408 20227 14242 14242 1 31604 0 LEAAYLDLQR ILQESRMMIPDCQRRLEAAYLDLQRILENE DCQRRLEAAYLDLQRILENEKDLEEAEEYK R L E Q R I 2 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 10 0 1190.6295 O75347 O75347 71 80 TBCA Tubulin-specific chaperone A yes yes 2 0.001034 142.36 By MS/MS 10 0 1 1 230030 230030 0 8125 297 8409 20228 14243 14243 1 244490 0 LEACILTQGDK KQFYEPKPDLLPPLKLEACILTQGDKISLQ PPLKLEACILTQGDKISLQEPLDYLLCCIQ K L E D K I 1 0 0 1 1 1 1 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1246.6227 Q9NVI1 Q9NVI1 647 657 FANCI Fanconi anemia group I protein yes yes 2 0.0017574 123.51 By MS/MS 3 0 1 1 839740 839740 0 8126 2654 8410 20229 14244 14244 1 21921 0 LEAEGVPEVSEK MAELAKELPQVSFVKLEAEGVPEVSEKYEI FVKLEAEGVPEVSEKYEISSVPTFLFFKNS K L E E K Y 1 0 0 0 0 0 4 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 12 0 1285.6402 O76003 O76003 68 79 GLRX3 Glutaredoxin-3 yes yes 2 0.0019329 122.69 By MS/MS 7 0 1 1 5782600 5782600 0 8127 342 8411 20230 14245 14245 1 103340 0 LEAGAMVLADR LTAAVTTDQETGERRLEAGAMVLADRGVVC GERRLEAGAMVLADRGVVCIDEFDKMSDMD R L E D R G 3 1 0 1 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 1 0 0 11 0 1144.591 P25205 P25205 393 403 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.02376 85.963 By MS/MS 4.5 0.5 1 1 2 1260800 1260800 0 8128 683 8412 20231;20232 14246 14246 1 45765 0 LEAGDKKPDAK WEAFPVYRQPPESLKLEAGDKKPDAK____ ESLKLEAGDKKPDAK_______________ K L E A K - 2 0 0 2 0 0 1 1 0 0 1 3 0 0 1 0 0 0 0 0 0 0 11 2 1170.6245 O75489 O75489 254 264 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 8.7377E-06 173.24 By MS/MS 8 0 1 1 2229100 2229100 0 8129 313 8413 20233 14247 14247 1 147050 0 LEAGDYADLVK KEALESVEVLIKNPKLEAGDYADLVKALKK KNPKLEAGDYADLVKALKKVVGKDTNVMLV K L E V K A 2 0 0 2 0 0 1 1 0 0 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1192.5976 Q14008 Q14008 312 322 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00078476 160.53 By MS/MS 2 0.816 1 1 1 3 2682500 2682500 0 8130 1405 8414 20234;20235;20236 14248;14249 14248 2 119360 0 LEALITQTR MRLRSGGTEGLLAEKLEALITQTRAKQAAT GLLAEKLEALITQTRAKQAATMSEVEWRGR K L E T R A 1 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1043.5975 Q9UHB9 Q9UHB9 278 286 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0005137 153.05 By MS/MS 5 0 1 1 1662700 1662700 0 8131 2779 8415 20237 14250 14250 1 68345 0 LEAQLTENNIVK QLQKDLSKSMSGRQKLEAQLTENNIVKEEL RQKLEAQLTENNIVKEELALLDGSNVVFKL K L E V K E 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 12 0 1370.7405 O15212 O15212 33 44 PFDN6 Prefoldin subunit 6 yes yes 2 0.0031703 115.23 By MS/MS 10 0 1 1 324170 324170 0 8132 159 8416 20238 14251 14251 1 344560 0 LEAQVNR EQGSMILALSDTEQRLEAQVNRNTIYSTLV ALSDTEQRLEAQVNRNTIYSTLVTCVTFVA R L E N R N 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 828.44537 Q96ER9 Q96ER9 378 384 CCDC51 Coiled-coil domain-containing protein 51 yes yes 2 0.020411 125.25 By MS/MS By matching 7 0 2 1 1 1582400 1559700 22667 8133 2166 8417 20239;20240 14252 14252 1 27873 93052 LEATINELV KGQKVGEFSGANKEKLEATINELV______ GANKEKLEATINELV_______________ K L E L V - 1 0 1 0 0 0 2 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5441 P10599 P10599 97 105 TXN Thioredoxin yes yes 2 0.01673 98.582 By MS/MS 10 0 1 1 957170 957170 0 8134 539 8418 20241 14253 14253 1 1017400 0 LEATVEMK L E M K 1 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 8 0 919.46847 REV__P15735 yes yes 3 0.02743 94.262 By MS/MS 4 0 1 1 252830 252830 0 + 8135 3021 8419 20242 14254 14254 1741 1 6902 0 LECADLLETR AGEHNKACSLLGKLRLECADLLETRGVVLR LGKLRLECADLLETRGVVLRDPTLFSFLWV R L E T R G 1 1 0 1 1 0 2 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1218.5914 Q6PI48 Q6PI48 457 466 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.00047582 153.97 By MS/MS 5 0 1 1 4836400 4836400 0 8136 1715 8420 20243 14255 14255 1 198790 0 LECSEELGDLVK QGRKQLLEKWLKEDKLECSEELGDLVKSVD EDKLECSEELGDLVKSVDPTLALSVYLRAN K L E V K S 0 0 0 1 1 0 3 1 0 0 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1390.665 Q00610;P53675 Q00610 457 468 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.0013469 141.89 By MS/MS 1.5 0.5 1 1 2 387080 387080 0 8137 1235 8421 20244;20245 14256 14256 1 19002 0 LECVEPNCR IFRKKAKTTKKIVLRLECVEPNCRSKRMLA KKIVLRLECVEPNCRSKRMLAIKRCKHFEL R L E C R S 0 1 1 0 2 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 9 0 1175.5063 P83881;Q969Q0 P83881 70 78 RPL36A;RPL36AL 60S ribosomal protein L36a;60S ribosomal protein L36a-like yes no 2 0.00021473 163.15 By MS/MS 10 0 1 1 490140 490140 0 8138 1214 8422 20246 14257 14257 1 520970 0 LEDDAKDNQQK DMLKRVEPLRNELQKLEDDAKDNQQKANEV ELQKLEDDAKDNQQKANEVEQMIRDLEASI K L E Q K A 1 0 1 3 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 11 1 1302.6052 Q14204 Q14204 3419 3429 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00036994 169.37 By MS/MS 1 0 1 1 293540 293540 0 8139 1421 8423 20247 14258 14258 1 14342 0 LEDILESINSIK DWKKYITGTDILDMKLEDILESINSIKSRL DMKLEDILESINSIKSRLSKSGHIQTLLRA K L E I K S 0 0 1 1 0 0 2 0 0 3 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1372.745 Q9Y3A6 Q9Y3A6 153 164 TMED5 Transmembrane emp24 domain-containing protein 5 yes yes 2 6.9862E-05 161.67 By MS/MS 9 0 1 1 113290 113290 0 8140 2923 8424 20248 14259 14259 1 65020 0 LEDLATLIQK NPRTLFKLEDLRKQRLEDLATLIQKIYRGW LRKQRLEDLATLIQKIYRGWKCRTHFLLMK R L E Q K I 1 0 0 1 0 1 1 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 10 0 1142.6547 O43795 O43795 704 713 MYO1B Unconventional myosin-Ib yes yes 2 6.6067E-07 187.22 By MS/MS 4 0.816 1 1 1 3 2782100 2782100 0 8141 223 8425 20249;20250;20251 14260 14260 1 77733 0 LEDLIVK PYVMNRGSTPYGGVKLEDLIVKDGLTDVYN STPYGGVKLEDLIVKDGLTDVYNKIHMGSC K L E V K D 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 7 0 828.49567 P24752 P24752 175 181 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0020455 190.71 By MS/MS 8.4 1.02 1 2 1 1 5 46264000 46264000 0 8142 680 8426 20252;20253;20254;20255;20256 14261;14262 14261 2 1195000 0 LEDLIVKDGLTDVYNK PYVMNRGSTPYGGVKLEDLIVKDGLTDVYN EDLIVKDGLTDVYNKIHMGSCAENTAKKLN K L E N K I 0 0 1 3 0 0 1 1 0 1 3 2 0 0 0 0 1 0 1 2 0 0 16 1 1833.9724 P24752 P24752 175 190 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2;3 8.5156E-07 203.74 By MS/MS 7 0 4 4 14417000 14417000 0 8143 680 8427 20257;20258;20259;20260 14263;14264;14265;14266 14264 4 257630 0 LEDLSESIVNDFAYMK AKVEKLKPLEVELRRLEDLSESIVNDFAYM EDLSESIVNDFAYMKKREEEMRDTNESTNT R L E M K K 1 0 1 2 0 0 2 0 0 1 2 1 1 1 0 2 0 0 1 1 0 0 16 0 1872.8815 P49755 P49755 154 169 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 0.0061773 95.273 By MS/MS 9 0 1 1 83403 83403 0 8144 930 8428 20261 14267 14267 695 1 47866 0 LEDQLVVK L E V K 0 0 0 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 8 0 942.5386 REV__Q9Y592 yes yes 2 0.0090006 122.18 By MS/MS 2.75 0.829 2 1 1 4 1332700 1332700 0 + 8145 3052 8429 20262;20263;20264;20265 14268 14268 1 45795 0 LEDQYFPWR FVWGKNIRGCLGIGRLEDQYFPWRVTMPGE CLGIGRLEDQYFPWRVTMPGEPVDVACGVD R L E W R V 0 1 0 1 0 1 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 9 0 1252.5877 Q96I51 Q96I51 431 439 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 2 0.0087415 123.21 By MS/MS 7 0 1 1 597570 597570 0 8146 2199 8430 20266 14269 14269 1 10679 0 LEDTKLIK VDFELIKVEGKVGGRLEDTKLIKGVIVDKD EGKVGGRLEDTKLIKGVIVDKDFSHPQMPK R L E I K G 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 1 0 0 0 0 0 8 1 958.5699 P48643 P48643 219 226 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.001918 153.71 By MS/MS 6.5 0.5 1 1 2 5142900 5142900 0 8147 909 8431 20267;20268 14270 14270 1 42582 0 LEDVALQILLACPVSK IPDAMNLILLLVTEKLEDVALQILLACPVS EDVALQILLACPVSKEDGPSVFGSFFLQHC K L E S K E 2 0 0 1 1 1 1 0 0 1 4 1 0 0 1 1 0 0 0 2 0 0 16 0 1767.9805 P42704 P42704 350 365 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.035505 87.18 By MS/MS 3 0 1 1 114790 114790 0 8148 854 8432 20269 14271;14272 14272 2 2996.6 0 LEEAILGSIGAR MNSLTFKKSKDMRAKLEEAILGSIGARQEM RAKLEEAILGSIGARQEMVRRSRGQLGTYT K L E A R Q 2 1 0 0 0 0 2 2 0 2 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1227.6823 Q96N67 Q96N67 1396 1407 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 5.7748E-07 178.46 By MS/MS 2.5 0.5 1 1 2 864010 864010 0 8149 2230 8433 20270;20271 14273 14273 1 31895 0 LEEEKLSQK NKECRQSLSHMLSAKLEEEKLSQKKESEKR HMLSAKLEEEKLSQKKESEKRNVTVQPDDP K L E Q K K 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 9 1 1102.587 P53618 P53618 647 655 COPB1 Coatomer subunit beta yes yes 2 4.0144E-07 200.86 By MS/MS 4.5 0.5 1 1 2 1931300 1931300 0 8150 1004 8434 20272;20273 14274 14274 1 56271 0 LEEEKLSQKK NKECRQSLSHMLSAKLEEEKLSQKKESEKR MLSAKLEEEKLSQKKESEKRNVTVQPDDPI K L E K K E 0 0 0 0 0 1 3 0 0 0 2 3 0 0 0 1 0 0 0 0 0 0 10 2 1230.682 P53618 P53618 647 656 COPB1 Coatomer subunit beta yes yes 2;3 0.00073775 156.83 By MS/MS 4.33 0.471 2 1 3 2879000 2879000 0 8151 1004 8435 20274;20275;20276 14275;14276 14275 2 80059 0 LEEEYQIQK IDLRLTVEQAVLLSRLEEEYQIQKWGNIEW AVLLSRLEEEYQIQKWGNIEWAHDYELQEL R L E Q K W 0 0 0 0 0 2 3 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1178.5819 Q8N5M1 Q8N5M1 239 247 ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2 yes yes 2 0.000187 164.96 By MS/MS 8 0 1 1 576310 576310 0 8152 1923 8436 20277 14277 14277 1 38019 0 LEEGGPVYSPPAEVVVK VVEKSLKSLKDKNKKLEEGGPVYSPPAEVV EGGPVYSPPAEVVVKKSLGQRVLDELKHYY K L E V K K 1 0 0 0 0 0 3 2 0 0 1 1 0 0 3 1 0 0 1 4 0 0 17 0 1768.9247 O95202 O95202 134 150 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.00043023 122.66 By MS/MS 5 0 1 1 1206400 1206400 0 8153 374 8437 20278 14278 14278 1 49586 0 LEEGGPVYSPPAEVVVKK VVEKSLKSLKDKNKKLEEGGPVYSPPAEVV GGPVYSPPAEVVVKKSLGQRVLDELKHYYH K L E K K S 1 0 0 0 0 0 3 2 0 0 1 2 0 0 3 1 0 0 1 4 0 0 18 1 1897.0197 O95202 O95202 134 151 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 3 0.020547 65.652 By MS/MS 5 0 1 1 1513400 1513400 0 8154 374 8438 20279 14279 14279 1 62205 0 LEEGPPVTTVLTR ANDATFEIKKCDLHRLEEGPPVTTVLTRED HRLEEGPPVTTVLTREDGLKYYRMMQTVRR R L E T R E 0 1 0 0 0 0 2 1 0 0 2 0 0 0 2 0 3 0 0 2 0 0 13 0 1410.7718 P08559 P08559 46 58 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0015634 124.42 By MS/MS By MS/MS 8.33 1.25 1 1 1 2 1 8486400 8410000 76439 8155 504 8439 20280;20281;20282 14280;14281;14282;14283 14281 4 955000 313800 LEEGSELEK FVECLDCEDAEEFVRLEEGSELEKKLVAIR AEEFVRLEEGSELEKKLVAIRHETRIHILN R L E E K K 0 0 0 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1032.4975 Q92621 Q92621 966 974 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0042709 133.58 By MS/MS 2 0 1 1 419330 419330 0 8156 2070 8440 20283 14284 14284 1 20843 0 LEEGSELEKK FVECLDCEDAEEFVRLEEGSELEKKLVAIR EEFVRLEEGSELEKKLVAIRHETRIHILNL R L E K K L 0 0 0 0 0 0 4 1 0 0 2 2 0 0 0 1 0 0 0 0 0 0 10 1 1160.5925 Q92621 Q92621 966 975 NUP205 Nuclear pore complex protein Nup205 yes yes 3 0.029451 84.817 By MS/MS 2 0 1 1 0 0 0 8157 2070 8441 20284 14285 14285 1 0 0 LEEHFKNQELR NNEHFEELGGILKAKLEEHFKNQELRQVKR LKAKLEEHFKNQELRQVKRQDEDYDEQVEE K L E L R Q 0 1 1 0 0 1 3 0 1 0 2 1 0 1 0 0 0 0 0 0 0 0 11 1 1441.7314 O00410 O00410 801 811 IPO5 Importin-5 yes yes 3 0.019663 78.548 By MS/MS 5 1.41 1 1 1 1 1 5 2402600 2402600 0 8158 91 8442 20285;20286;20287;20288;20289 14286 14286 1 48922 0 LEEIPKYKDLLK NEQSDLVHRISGDKKLEEIPKYKDLLKLFT DKKLEEIPKYKDLLKLFTTMELMRWSTLVE K L E L K L 0 0 0 1 0 0 2 0 0 1 3 3 0 0 1 0 0 0 1 0 0 0 12 2 1487.8599 O00232 O00232 296 307 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 0.036175 73.632 By MS/MS 6 0 1 1 3068700 3068700 0 8159 81 8443 20290 14287 14287 1 23929 0 LEEIPLIK KNQEKKIDYFERAKRLEEIPLIKSAYEEQR YFERAKRLEEIPLIKSAYEEQRIKDMDLWE R L E I K S 0 0 0 0 0 0 2 0 0 2 2 1 0 0 1 0 0 0 0 0 0 0 8 0 953.57973 Q14152 Q14152 704 711 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0038196 143.85 By MS/MS 3 1.41 1 1 1 1 1 5 12948000 12948000 0 8160 1409 8444 20291;20292;20293;20294;20295 14288;14289 14288 2 347370 0 LEELHVIDVK PLDRDNKELKAFNIRLEELHVIDVKFLYGC AFNIRLEELHVIDVKFLYGCQAPTICFVYQ R L E V K F 0 0 0 1 0 0 2 0 1 1 2 1 0 0 0 0 0 0 0 2 0 0 10 0 1193.6656 Q16531 Q16531 159 168 DDB1 DNA damage-binding protein 1 yes yes 3 0.039567 89.08 By MS/MS 4 0.816 1 1 1 3 1067900 1067900 0 8161 1537 8445 20296;20297;20298 14290 14290 1 30568 0 LEELKESILADK CVSNLMVCNLAYSGKLEELKESILADKSLA SGKLEELKESILADKSLATRTDQDSRTALH K L E D K S 1 0 0 1 0 0 3 0 0 1 3 2 0 0 0 1 0 0 0 0 0 0 12 1 1386.7606 O75832 O75832 19 30 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 2;3 8.8878E-16 223.77 By MS/MS 8.6 1.02 1 1 2 1 5 5125700 5125700 0 8162 332 8446 20299;20300;20301;20302;20303 14291;14292 14291 2 2798300 0 LEELYTK QSQNSGPGQPAVWHRLEELYTKKLWHQLTL GQPAVWHRLEELYTKKLWHQLTLQVLDFVQ R L E T K K 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 7 0 894.46985 Q9UNM6 Q9UNM6 25 31 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0088489 157.21 By MS/MS 7 0 1 1 4604200 4604200 0 8163 2845 8447 20304 14293 14293 1 82277 0 LEENLQETHSAVL VPPVTSIGIDNLGLKLEENLQETHSAVL__ LKLEENLQETHSAVL_______________ K L E V L - 1 0 1 0 0 1 3 0 1 0 3 0 0 0 0 1 1 0 0 1 0 0 13 0 1481.7362 Q8IXU6 Q8IXU6 362 374 SLC35F2 Solute carrier family 35 member F2 yes yes 2 0.00011565 154.15 By MS/MS 2 0.816 1 1 1 3 611600 611600 0 8164 1874 8448 20305;20306;20307 14294 14294 1 26673 0 LEEQDEFEK QAQLQRLGVLHVGQKLEEQDEFEKIYKNAW LHVGQKLEEQDEFEKIYKNAWADNANACAK K L E E K I 0 0 0 1 0 1 4 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1165.5139 Q9NTJ5 Q9NTJ5 424 432 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.0001537 167.12 By MS/MS 1.5 0.5 1 1 2 963370 963370 0 8165 2631 8449 20308;20309 14295;14296 14295 2 47334 0 LEEQLKETVEK DPPATEKTLLEEKVKLEEQLKETVEKYKRA EKVKLEEQLKETVEKYKRALADTENLRQRS K L E E K Y 0 0 0 0 0 1 4 0 0 0 2 2 0 0 0 0 1 0 0 1 0 0 11 1 1344.7137 Q9HAV7 Q9HAV7 67 77 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.00050098 166.69 By MS/MS 9 0 1 1 377970 377970 0 8166 2547 8450 20310 14297 14297 1 216920 0 LEERTEFAHR LLLLRSCGSLLPELKLEERTEFAHRIWDTL LPELKLEERTEFAHRIWDTLQKLGAVYDVS K L E H R I 1 2 0 0 0 0 3 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 10 1 1286.6367 P42704 P42704 139 148 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3;4 0.027736 91.855 By MS/MS 3.33 0.471 2 1 3 2764200 2764200 0 8167 854 8451 20311;20312;20313 14298;14299 14298 2 72443 0 LEESDVLQEAR EMKESIKKFRDEARRLEESDVLQEARRKYK EARRLEESDVLQEARRKYKTIESETVRTSE R L E A R R 1 1 0 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1287.6307 O43615 O43615 91 101 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 6.1077E-05 192.38 By MS/MS 7.5 0.5 1 1 2 11417000 11417000 0 8168 209 8452 20314;20315 14300;14301 14300 2 260290 0 LEETKEYQEPEVPESNQK SITLKNKTESSLLAKLEETKEYQEPEVPES TKEYQEPEVPESNQKQWQSKRKSECINQNP K L E Q K Q 0 0 1 0 0 2 6 0 0 0 1 2 0 0 2 1 1 0 1 1 0 0 18 1 2176.0172 P33981 P33981 368 385 TTK Dual specificity protein kinase TTK yes yes 3 0.0079129 77.027 By MS/MS 4 0 1 1 652880 652880 0 8169 772 8453 20316 14302 14302 1 17823 0 LEETKLEAVR VPMKYMLKYFGAHERLEETKLEAVRDNNLE GAHERLEETKLEAVRDNNLELVQEILRDLA R L E V R D 1 1 0 0 0 0 3 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 10 1 1186.6558 Q14168 Q14168 79 88 MPP2 MAGUK p55 subfamily member 2 yes yes 3 0.0027036 104.42 By MS/MS 4.5 0.5 1 1 2 6997300 6997300 0 8170 1415 8454 20317;20318 14303;14304 14304 2 248740 0 LEETLEQLAK KWQKSLQYERDQRIRLEETLEQLAKQHNHL DQRIRLEETLEQLAKQHNHLERAFRGATVL R L E A K Q 1 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 10 0 1172.6289 P22059 P22059 304 313 OSBP Oxysterol-binding protein 1 yes yes 2 0.00093084 126.07 By MS/MS 4 0 1 1 1282000 1282000 0 8171 654 8455 20319 14305 14305 1 34998 0 LEETLPVIR MLGLGDMNADQLASKLEETLPVIRSVSEQF DQLASKLEETLPVIRSVSEQFKDPEQTTFI K L E I R S 0 1 0 0 0 0 2 0 0 1 2 0 0 0 1 0 1 0 0 1 0 0 9 0 1068.6179 O43681 O43681 222 230 ASNA1 ATPase ASNA1 yes yes 2 0.0051036 115.49 By MS/MS 7.5 0.5 1 1 2 2258400 2258400 0 8172 214 8456 20320;20321 14306 14306 1 49895 0 LEETQALLR AAKDADERIEKVQTRLEETQALLRKKEKEF EKVQTRLEETQALLRKKEKEFEETMDALQA R L E L R K 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1071.5924 Q14203 Q14203 998 1006 DCTN1 Dynactin subunit 1 yes yes 2 1.9371E-08 209.58 By MS/MS 3 0 1 1 5220200 5220200 0 8173 1420 8457 20322 14307 14307 1 136270 0 LEEWLGR SSQHLFLDLPKLEKRLEEWLGRTLPGSDWT DLPKLEKRLEEWLGRTLPGSDWTPNAQFIT R L E G R T 0 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 7 0 901.46577 P56192 P56192 461 467 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.035671 111.04 By MS/MS 4 0 1 1 2889700 2889700 0 8174 1042 8458 20323 14308 14308 1 78887 0 LEEYLTQQEIGK LGCFVDLSSQEGLQRLEEYLTQQEIGKKAQ LQRLEEYLTQQEIGKKAQQETGEREASCRD R L E G K K 0 0 0 0 0 2 3 1 0 1 2 1 0 0 0 0 1 0 1 0 0 0 12 0 1449.7351 Q86XL3 Q86XL3 599 610 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 5.1424E-12 213.35 By MS/MS 4 0 1 1 1581000 1581000 0 8175 1841 8459 20324 14309 14309 1 43160 0 LEFWCTDVK PRVLDLQQIKGMKDRLEFWCTDVKSMEMLV KGMKDRLEFWCTDVKSMEMLVEHQAHDILT R L E V K S 0 0 0 1 1 0 1 0 0 0 1 1 0 1 0 0 1 1 0 1 0 0 9 0 1196.5536 Q9UNM6 Q9UNM6 353 361 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0016507 133.57 By MS/MS 7 0 1 1 1604300 1604300 0 8176 2845 8460 20325 14310 14310 1 28669 0 LEGDAALNR DKLVGEIKEEEKNEKLEGDAALNRLFQQIY EEKNEKLEGDAALNRLFQQIYSDGSDEVKR K L E N R L 2 1 1 1 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 957.48796 Q9Y2Z0 Q9Y2Z0 303 311 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.017701 98.033 By MS/MS 8 0.816 1 1 1 3 2502300 2502300 0 8177 2907 8461 20326;20327;20328 14311 14311 1 83213 0 LEGDNVNPESQLIQQSEQSESETAGSTK RELDMEPYTVAGVAKLEGDNVNPESQLIQQ QQSEQSESETAGSTKYRLVGVLVHSGQASG K L E T K Y 1 0 2 1 0 4 5 2 0 1 2 1 0 0 1 5 2 0 0 1 0 0 28 0 3004.3745 Q93008 Q93008 1835 1862 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 6.3291E-06 83.879 By MS/MS 3 0.816 1 1 1 3 2458400 2458400 0 8178 2096 8462 20329;20330;20331 14312 14312 1 106380 0 LEGDNVNPESQLIQQSEQSESETAGSTKYR RELDMEPYTVAGVAKLEGDNVNPESQLIQQ SEQSESETAGSTKYRLVGVLVHSGQASGGH K L E Y R L 1 1 2 1 0 4 5 2 0 1 2 1 0 0 1 5 2 0 1 1 0 0 30 1 3323.539 Q93008 Q93008 1835 1864 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 1.8221E-07 85.595 By MS/MS 2.5 0.5 1 1 2 1091100 1091100 0 8179 2096 8463 20332;20333 14313;14314 14313 2 43113 0 LEGEVTPNSLSTSYK QEEKTSTATSKTQTRLEGEVTPNSLSTSYK LEGEVTPNSLSTSYKTVSLPLSSPNIKLNL R L E Y K T 0 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 2 0 1 1 0 0 15 0 1623.7992 Q8IWZ3 Q8IWZ3 1648 1662 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 0.0070527 130.69 By MS/MS 1.5 0.5 1 1 2 367920 367920 0 8180 1868 8464 20334;20335 14315;14316 14316 2 18145 0 LEGGSGGDSEVQR SIIFMDEIDSIGSSRLEGGSGGDSEVQRTM SRLEGGSGGDSEVQRTMLELLNQLDGFEAT R L E Q R T 0 1 0 1 0 1 2 4 0 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1289.5848 P62195 P62195 259 271 PSMC5 26S protease regulatory subunit 8 yes yes 2 1.8223E-11 178.53 By MS/MS By matching 7.33 0.471 2 1 2 1 225750 155740 70004 8181 1117 8465 20336;20337;20338 14317;14318 14317 2 10274 287380 LEGIVNK NADLPEGEKKPIDQRLEGIVNKMFQRCLDD EKKPIDQRLEGIVNKMFQRCLDDHKYKQAI R L E N K M 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 771.44905 Q99460 Q99460 130 136 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.010313 153.15 By MS/MS 4.5 1.12 1 1 1 1 4 5556900 5556900 0 8182 2268 8466 20339;20340;20341;20342 14319 14319 1 159570 0 LEGNSPQGSNQGVK FFTLARDIKAKMDKKLEGNSPQGSNQGVKI KLEGNSPQGSNQGVKITPDQQKRSSFFRCV K L E V K I 0 0 2 0 0 2 1 3 0 0 1 1 0 0 1 2 0 0 0 1 0 0 14 0 1413.6848 P61006 P61006 177 190 RAB8A Ras-related protein Rab-8A yes yes 2 2.6691E-06 201.38 By MS/MS 9 0 1 1 422370 422370 0 8183 1080 8467 20343 14320 14320 1 242400 0 LEGNTVGVEAAR VIKEIEDFDSLEALRLEGNTVGVEAARVIA ALRLEGNTVGVEAARVIAKALEKKSELKRC R L E A R V 2 1 1 0 0 0 2 2 0 0 1 0 0 0 0 0 1 0 0 2 0 0 12 0 1214.6255 P46060 P46060 56 67 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 4.8699E-05 166.29 By MS/MS 3.5 1.12 1 1 1 1 4 5073200 5073200 0 8184 876 8468 20344;20345;20346;20347 14321 14321 1 206010 0 LEGQGDVPTPK IEIKLKKPEAVRWEKLEGQGDVPTPKQFVA RWEKLEGQGDVPTPKQFVADVKNLYPSSSP K L E P K Q 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 0 1 0 0 1 0 0 11 0 1139.5823 Q9Y2Z0 Q9Y2Z0 257 267 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 8.6297E-05 163.9 By MS/MS 7 0 1 1 3697800 3697800 0 8185 2907 8469 20348 14322 14322 1 66080 0 LEGTEDLSDVLVR AFACLLHLANEKNLKLEGTEDLSDVLVRQG LKLEGTEDLSDVLVRQGD____________ K L E V R Q 0 1 0 2 0 0 2 1 0 0 3 0 0 0 0 1 1 0 0 2 0 0 13 0 1444.7409 Q15003 Q15003 726 738 NCAPH Condensin complex subunit 2 yes yes 2 1.2396E-11 227.94 By MS/MS 6 2.16 1 1 1 3 3978600 3978600 0 8186 1457 8470 20349;20350;20351 14323;14324 14323 2 115900 0 LEGTNVQEAQK KACRELELKVPLVVRLEGTNVQEAQKILNN LVVRLEGTNVQEAQKILNNSGLPITSAIDL R L E Q K I 1 0 1 0 0 2 2 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 11 0 1215.6095 Q96I99 Q96I99 393 403 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 1.0528E-06 185.33 By MS/MS 7.5 0.5 1 1 2 4504900 4504900 0 8187 2200 8471 20352;20353 14325 14325 1 93015 0 LEGVEGVAHIIDPK GKSMAWRVLLKALERLEGVEGVAHIIDPKA RLEGVEGVAHIIDPKAISKDHLYGTLDPNT R L E P K A 1 0 0 1 0 0 2 2 1 2 1 1 0 0 1 0 0 0 0 2 0 0 14 0 1475.7984 Q14204 Q14204 2244 2257 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.023764 79.744 By MS/MS 1.5 0.5 1 1 2 405070 405070 0 8188 1421 8472 20354;20355 14326 14326 1 19854 0 LEHLFESR TLWASLDPVSVDTARLEHLFESRAKEVLPS VSVDTARLEHLFESRAKEVLPSKKAGEGRR R L E S R A 0 1 0 0 0 0 2 0 1 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 1029.5243 Q9Y613 Q9Y613 667 674 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.035844 101.25 By MS/MS 3 0 1 1 0 0 0 8189 2993 8473 20356 14327 14327 1 0 0 LEHTAQTYSELQGER VATWVDETLSSVASKLEHTAQTYSELQGER LEHTAQTYSELQGERIVSLHCCALYTCAQL K L E E R I 1 1 0 0 0 2 3 1 1 0 2 0 0 0 0 1 2 0 1 0 0 0 15 0 1760.8329 O95071 O95071 458 472 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2;3 1.8518E-05 159.5 By MS/MS 2.67 1.49 2 1 1 1 1 6 2679300 2679300 0 8190 364 8474 20357;20358;20359;20360;20361;20362 14328;14329 14328 2 97162 0 LEIAPQIYGLR LLKKHDIELYMHLNRLEIAPQIYGLRWVRL HLNRLEIAPQIYGLRWVRLLFGREFPLQDL R L E L R W 1 1 0 0 0 1 1 1 0 2 2 0 0 0 1 0 0 0 1 0 0 0 11 0 1271.7238 Q92609 Q92609 323 333 TBC1D5 TBC1 domain family member 5 yes yes 2 0.0045399 109.66 By MS/MS 4 0 1 1 342490 342490 0 8191 2066 8475 20363 14330 14330 1 9349.6 0 LEIGFNGNR ADENGEDYYLWTYKKLEIGFNGNRIVDVNL LWTYKKLEIGFNGNRIVDVNLTSEGKVKLV K L E N R I 0 1 2 0 0 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1018.5196 Q9HD45 Q9HD45 161 169 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 0.015126 107.01 By MS/MS 1 0 1 1 0 0 0 8192 2568 8476 20364 14331 14331 1 0 0 LEILQIHTK FDREVDIGIPDATGRLEILQIHTKNMKLAD PDATGRLEILQIHTKNMKLADDVDLEQVAN R L E T K N 0 0 0 0 0 1 1 0 1 2 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1093.6495 P55072 P55072 378 386 VCP Transitional endoplasmic reticulum ATPase yes yes 2;3 0.0021206 133.99 By MS/MS 4.5 0.5 2 2 4 5174500 5174500 0 8193 1026 8477 20365;20366;20367;20368 14332;14333 14333 2 154860 0 LEIWEDLK SESLTALLKNRPSNKLEIWEDLKIISFTRS KNRPSNKLEIWEDLKIISFTRSTVAVYSTC K L E L K I 0 0 0 1 0 0 2 0 0 1 2 1 0 0 0 0 0 1 0 0 0 0 8 0 1044.5492 P56589 P56589 101 108 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 0.018258 109.01 By MS/MS 7 0 1 1 228590 228590 0 8194 1049 8478 20369 14334 14334 1 4084.9 0 LEKEEAK RPERPMAFLREYFERLEKEEAKQIQNLQKA FLREYFERLEKEEAKQIQNLQKAGTRTDSR R L E A K Q 1 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 7 1 845.44945 P10644 P10644 57 63 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 2 0.053332 166.78 By MS/MS By matching 6 0 2 1 1 2614400 2596900 17521 8195 542 8479 20370;20371 14335 14335 1 20251 53736 LEKEVQDLTVR GPPLAERALRVKAVKLEKEVQDLTVRYQRA KAVKLEKEVQDLTVRYQRAIADCENIRRRT K L E V R Y 0 1 0 1 0 1 2 0 0 0 2 1 0 0 0 0 1 0 0 2 0 0 11 1 1328.73 Q8TAA5 Q8TAA5 69 79 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.01002 128.88 By MS/MS 9 0 1 1 543530 543530 0 8196 1979 8480 20372 14336 14336 1 311940 0 LELGDVQALSLWQK DDKSVAKAAQEFFQRLELGDVQALSLWQKF RLELGDVQALSLWQKFRDLSIEEYIRVYKR R L E Q K F 1 0 0 1 0 2 1 1 0 0 4 1 0 0 0 1 0 1 0 1 0 0 14 0 1598.8668 Q5T160 Q5T160 230 243 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 2.2127E-59 300.98 By MS/MS 6 0 1 1 4265300 4265300 0 8197 1624 8481 20373 14337 14337 1 33261 0 LELNLVR ______________________________ ______________________________ R L E V R L 0 1 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 855.5178 Q9NZ43 Q9NZ43 6 12 USE1 Vesicle transport protein USE1 yes yes 2 0.027209 116.88 By MS/MS 7.5 0.5 1 1 2 1645600 1645600 0 8198 2706 8482 20374;20375 14338 14338 1 99698 0 LENDGATALAEAFR GKPLALKVFVAGRNRLENDGATALAEAFRV RLENDGATALAEAFRVIGTLEEVHMPQNGI R L E F R V 4 1 1 1 0 0 2 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 14 0 1476.7209 P46060 P46060 192 205 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 1.5366E-42 267.37 By MS/MS 5 0 1 1 0 0 0 8199 876 8483 20376 14339 14339 1 0 0 LENDQIESLR PAGHQIGTVSPLFQKLENDQIESLRQRFGG PLFQKLENDQIESLRQRFGGGQAKTSPKPA K L E L R Q 0 1 1 1 0 1 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1215.6095 P56192 P56192 805 814 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 1.4277E-15 246.63 By MS/MS By MS/MS 5.5 2.4 1 2 1 1 1 1 1 7 1 26946000 26788000 158150 8200 1042 8484 20377;20378;20379;20380;20381;20382;20383;20384 14340;14341;14342;14343;14344 14343 5 762720 330470 LENEIQTYR CQNTEYQQLLDIKIRLENEIQTYRSLLEGE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG R L E Y R S 0 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1164.5775 CON__P13645;P13645;CON__P02535-1 CON__P13645 442 450 KRT10 Keratin, type I cytoskeletal 10 yes no 2 6.2005E-17 249.03 By MS/MS By MS/MS 5.16 2.91 2 2 3 2 2 2 1 1 2 2 9 10 31125000 17854000 13271000 + 8201 49 8485 20385;20386;20387;20388;20389;20390;20391;20392;20393;20394;20395;20396;20397;20398;20399;20400;20401;20402;20403 14345;14346;14347;14348;14349;14350;14351;14352;14353;14354;14355;14356;14357;14358;14359;14360 14357 16 4225800 42990000 LENLDSDVVQLR EAQNSHVYWWRYCIRLENLDSDVVQLRERH CIRLENLDSDVVQLRERHWRIFSLSGTLET R L E L R E 0 1 1 2 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 12 0 1399.7307 Q9Y2S7 Q9Y2S7 269 280 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 1.5447E-11 236.69 By MS/MS 7.5 0.5 1 1 2 12547000 12547000 0 8202 2900 8486 20404;20405 14361;14362 14361 2 448930 0 LENNDNKPVTNSR IFVKDVPNNQLRHIRLENNDNKPVTNSRDT IRLENNDNKPVTNSRDTQEVPLEKAKQVLK R L E S R D 0 1 4 1 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 13 1 1499.7328 Q7Z739;Q9BYJ9 Q7Z739 521 533 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 yes no 3 0.008263 106.32 By MS/MS 5 0 1 1 516100 516100 0 8203 1804 8487 20406 14363 14363 1 21214 0 LENNENKPVTNSR IFVKDVPNSQLRHIRLENNENKPVTNSRDT IRLENNENKPVTNSRDTQEVPLEKAKQVLK R L E S R D 0 1 4 0 0 0 2 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 13 1 1513.7485 Q9Y5A9 Q9Y5A9 515 527 YTHDF2 YTH domain-containing family protein 2 yes yes 2;3 0.00035024 182.25 By MS/MS 5.33 0.471 2 1 3 3940700 3940700 0 8204 2966 8488 20407;20408;20409 14364;14365 14365 2 144680 0 LENSPLGEALR GKLSYVKTCQEKFKKLENSPLGEALRSGQA KFKKLENSPLGEALRSGQARRSSPPGHYYQ K L E L R S 1 1 1 0 0 0 2 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 11 0 1197.6354 Q9NX40 Q9NX40 105 115 OCIAD1 OCIA domain-containing protein 1 yes yes 2 2.901E-05 172.56 By MS/MS 7 0 1 1 1307300 1307300 0 8205 2678 8489 20410 14366 14366 1 23361 0 LENTFCCQQK KVNENKYENVDLLCKLENTFCCQQKERREE DLLCKLENTFCCQQKERREEEDIEEKKSIK K L E Q K E 0 0 1 0 2 2 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1326.5697 Q9NSV4 Q9NSV4 682 691 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.0059267 104.42 By MS/MS 3 0 1 1 442090 442090 0 8206 2628 8490 20411 14367 14367 1 11541 0 LENYPIPEPGPNEVLLR PNNLSLVVHGPGDLRLENYPIPEPGPNEVL NYPIPEPGPNEVLLRMHSVGICGSDVHYWE R L E L R M 0 1 2 0 0 0 3 1 0 1 3 0 0 0 4 0 0 0 1 1 0 0 17 0 1949.0258 Q00796 Q00796 22 38 SORD Sorbitol dehydrogenase yes yes 2 2.0644E-10 163.62 By MS/MS 7.5 0.5 1 1 2 3280000 3280000 0 8207 1237 8491 20412;20413 14368;14369 14368 2 108420 0 LEQDEYALR GHSADRLAAAFAVSRLEQDEYALRSHSLAK AFAVSRLEQDEYALRSHSLAKKAQDEGLLS R L E L R S 1 1 0 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 9 0 1135.551 P55084 P55084 239 247 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.00015423 159.79 By MS/MS By MS/MS 5.83 2.27 1 2 2 1 4 2 59289000 59060000 229270 8208 1027 8492 20414;20415;20416;20417;20418;20419 14370;14371;14372;14373;14374 14373 5 873410 833620 LEQEEQQR LEDDPLAAFKQRQSRLEQEEQQRLAELSKS FKQRQSRLEQEEQQRLAELSKSNKQNLFLG R L E Q R L 0 1 0 0 0 3 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1058.4993 Q3ZCQ8 Q3ZCQ8 318 325 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.0030197 149.82 By MS/MS By MS/MS 7.33 0.471 2 1 1 2 340880 238280 102600 8209 1573 8493 20420;20421;20422 14375;14376;14377 14375 3 4258.1 602510 LEQEEQQRLAELSK LEDDPLAAFKQRQSRLEQEEQQRLAELSKS RLEQEEQQRLAELSKSNKQNLFLGSLTSRL R L E S K S 1 1 0 0 0 3 4 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 14 1 1699.8741 Q3ZCQ8 Q3ZCQ8 318 331 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.00087026 145.81 By MS/MS 7.5 0.5 1 1 2 3155800 3155800 0 8210 1573 8494 20423;20424 14378;14379 14379 2 107500 0 LEQEHTNR EIENLEKQQKQTIERLEQEHTNRLRDEAKR QKQTIERLEQEHTNRLRDEAKRIKGEQEKE R L E N R L 0 1 1 0 0 1 2 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 1025.489 Q9H2G2 Q9H2G2 892 899 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0018693 158.87 By MS/MS 2 0 1 1 261110 261110 0 8211 2476 8495 20425 14380 14380 1 12979 0 LEQEIATYR QQNQEYKILLDVKTRLEQEIATYRRLLEGE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF R L E Y R R 1 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1121.5717 CON__P02533;P02533;CON__Q6IFX2;CON__P19012;CON__A2A4G1;P19012;CON__P08727;CON__P19001;P08727;CON__Q61782;CON__P35900;CON__Q9D312;P35900;CON__Q8N1A0;Q8N1A0;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 408 416 KRT14;KRT15;KRT19;KRT20;KRT222;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 20;Keratin-like protein KRT222;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 2 3.4743E-05 174.86 By MS/MS 4 2 1 1 1 1 1 1 1 7 1466700 0 1466700 + 8212 35;47;54 8496 20426;20427;20428;20429;20430;20431;20432 14381;14382 14381 2 0 3623700 LEQELFSGGNTGINFEK SDEDDWSKPLPPSERLEQELFSGGNTGINF QELFSGGNTGINFEKYDDIPVEATGNNCPP R L E E K Y 0 0 2 0 0 1 3 3 0 1 2 1 0 2 0 1 1 0 0 0 0 0 17 0 1881.9109 O00571;O15523 O00571 146 162 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 1.8419E-43 261.61 By MS/MS 5.5 0.5 1 1 2 4568100 4568100 0 8213 105 8497 20433;20434 14383 14383 1 129890 0 LEQGGTADGLR KYDEELEGERPHSFRLEQGGTADGLREREL HSFRLEQGGTADGLRERELEEIRAKLRLQA R L E L R E 1 1 0 1 0 1 1 3 0 0 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1115.5571 O43290 O43290 351 361 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 2 0.012872 95.775 By MS/MS 6 0 1 1 2305400 2305400 0 8214 190 8498 20435 14384 14384 1 17978 0 LEQGQAIDDLMPAQK MVVDGVKLLIEMEQRLEQGQAIDDLMPAQK LEQGQAIDDLMPAQK_______________ R L E Q K - 2 0 0 2 0 3 1 1 0 1 2 1 1 0 1 0 0 0 0 0 0 0 15 0 1655.8189 P12277 P12277 367 381 CKB Creatine kinase B-type yes yes 2 2.27E-38 257.2 By MS/MS 7 0 1 1 1486500 1486500 0 8215 565 8499 20436 14385 14385 355 1 26563 0 LEQGYELQFR LLLNEMEKLEKTLFRLEQGYELQFRLGPTL KTLFRLEQGYELQFRLGPTLQGKAVTVYTN R L E F R L 0 1 0 0 0 2 2 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 10 0 1281.6354 P35573 P35573 25 34 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0011425 120.06 By MS/MS 3 0 1 1 820340 820340 0 8216 792 8500 20437 14386 14386 1 21415 0 LEQIKKTELGAK LQEHEQIKKKTVRERLEQIKKTELGAKAFK RERLEQIKKTELGAKAFKDIDIEDLEELDP R L E A K A 1 0 0 0 0 1 2 1 0 1 2 3 0 0 0 0 1 0 0 0 0 0 12 2 1356.7977 Q14152 Q14152 640 651 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.00098214 128.36 By MS/MS 3 0 1 1 1106000 1106000 0 8217 1409 8501 20438 14387 14387 1 28871 0 LEQLGAQR TYEHFNAMGKYVDKRLEQLGAQRIFELGLG GKYVDKRLEQLGAQRIFELGLGDDDGNLEE R L E Q R I 1 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 913.49813 P16435 P16435 192 199 POR NADPH--cytochrome P450 reductase yes yes 2 0.0093028 121.05 By MS/MS 5.5 0.5 1 1 2 2901100 2901100 0 8218 607 8502 20439;20440 14388 14388 1 88484 0 LEQLSAAELQSR AGIARELERVEQQSRLEQLSAAELQSRNQG QSRLEQLSAAELQSRNQGHWADWLQAYRAR R L E S R N 2 1 0 0 0 2 2 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 12 0 1343.7045 Q9BVL4 Q9BVL4 539 550 SELO Selenoprotein O yes yes 2 1.4039E-16 222.2 By MS/MS 5 0 1 1 1726100 1726100 0 8219 2380 8503 20441 14389 14389 1 70949 0 LEQLSAK ALVNNFAAWDHVSAKLEQLSAKDFVNEAIS AWDHVSAKLEQLSAKDFVNEAISHWELQSE K L E A K D 1 0 0 0 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 787.44397 Q96CB9 Q96CB9 90 96 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 yes yes 2 0.031807 113.71 By MS/MS 7 0 1 1 1270300 1270300 0 8220 2137 8504 20442 14390 14390 1 22701 0 LEQSEAQLGR NADYTTGQVFDLSEKLEQSEAQLGRGSFML DLSEKLEQSEAQLGRGSFMLGLETHDRKSE K L E G R G 1 1 0 0 0 2 2 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1129.5728 Q92905 Q92905 273 282 COPS5 COP9 signalosome complex subunit 5 yes yes 2 1.3887E-15 217.66 By MS/MS 8 0.816 1 1 1 3 5160000 5160000 0 8221 2089 8505 20443;20444;20445 14391;14392 14391 2 254180 0 LEQSTIVK FEKAKESWEMNSEEKLEQSTIVKERGTVYF EMNSEEKLEQSTIVKERGTVYFKEGKYKQA K L E V K E 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 8 0 916.52295 Q02790 Q02790 267 274 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.045282 93.195 By MS/MS 6 0 1 1 2175800 2175800 0 8222 1255 8506 20446 14393 14393 1 16967 0 LEQTSSSLAAALR PESTGTVGPGQAQQRLEQTSSSLAAALRAA QRLEQTSSSLAAALRAAEKSIGTKEQEGTP R L E L R A 3 1 0 0 0 1 1 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 13 0 1345.7201 Q8WXE0 Q8WXE0 1148 1160 CASKIN2 Caskin-2 yes yes 2 6.5787E-13 213.63 By MS/MS 3 0 1 1 605320 605320 0 8223 2045 8507 20447 14394 14394 1 15802 0 LEQVEKELLR RYATALYSAASKQNKLEQVEKELLRVAQIL SKQNKLEQVEKELLRVAQILKEPKVAASVL K L E L R V 0 1 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 10 1 1255.7136 P48047 P48047 55 64 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 0.0042541 141.88 By MS/MS 9 0 2 2 13774000 13774000 0 8224 900 8508 20448;20449 14395;14396 14395 2 7905100 0 LERYDECLAVYR QTDKLKELYGQVLYRLERYDECLAVYRDLV LYRLERYDECLAVYRDLVRNSQDDYDEERK R L E Y R D 1 2 0 1 1 0 2 0 0 0 2 0 0 0 0 0 0 0 2 1 0 0 12 1 1585.7559 O76094 O76094 122 133 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.0090663 79.089 By MS/MS 5 0 1 1 1686000 1686000 0 8225 346 8509 20450 14397 14397 1 69300 0 LESCGVTSDNCR CQGLKDSPCQLEALKLESCGVTSDNCRDLC ALKLESCGVTSDNCRDLCGIVASKASLREL K L E C R D 0 1 1 1 2 0 1 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1396.5711 P13489 P13489 206 217 RNH1 Ribonuclease inhibitor yes yes 2 3.3643E-05 169.58 By MS/MS 7.5 0.5 1 1 2 1366900 1366900 0 8226 574 8510 20451;20452 14398 14398 1 30374 0 LESDYEILER RLLILMEARLSALYKLESDYEILERFPGAY SALYKLESDYEILERFPGAYLKGKKYRPLF K L E E R F 0 1 0 1 0 0 3 0 0 1 2 0 0 0 0 1 0 0 1 0 0 0 10 0 1265.6139 P41252 P41252 269 278 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.7851E-10 200.6 By MS/MS 3.5 0.5 1 1 2 7432400 7432400 0 8227 840 8511 20453;20454 14399 14399 1 194530 0 LESEEEGVPSTAIR RHKTTGQVVAMKKIRLESEEEGVPSTAIRE RLESEEEGVPSTAIREISLLKELRHPNIVS R L E I R E 1 1 0 0 0 0 4 1 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1515.7417 P06493 P06493 37 50 CDK1 Cyclin-dependent kinase 1 yes yes 2 6.1416E-05 194.48 By MS/MS By matching 8 0 2 1 1 16321000 16272000 49106 8228 477 8512 20455;20456 14400 14400 1 1073500 418940 LESEGSPETLTNLR MELRAKEEERLNKLRLESEGSPETLTNLRK RLESEGSPETLTNLRKGYLFMYNLVQFLGF R L E L R K 0 1 1 0 0 0 3 1 0 0 3 0 0 0 1 2 2 0 0 0 0 0 14 0 1544.7682 Q9P035 Q9P035 133 146 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 1.1024E-46 284.73 By MS/MS 2 0.816 1 1 1 3 11757000 11757000 0 8229 2723 8513 20457;20458;20459 14401;14402;14403;14404 14401 4 516360 0 LESEGSPETLTNLRK MELRAKEEERLNKLRLESEGSPETLTNLRK LESEGSPETLTNLRKGYLFMYNLVQFLGFS R L E R K G 0 1 1 0 0 0 3 1 0 0 3 1 0 0 1 2 2 0 0 0 0 0 15 1 1672.8632 Q9P035 Q9P035 133 147 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.0088663 114.24 By MS/MS 2 0.816 1 1 1 3 903540 903540 0 8230 2723 8514 20460;20461;20462 14405 14405 1 35849 0 LESELANFGPR TKTRHLALNLQEKSKLESELANFGPRINDI EKSKLESELANFGPRINDIKRIIQSREREM K L E P R I 1 1 1 0 0 0 2 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1231.6197 Q14683 Q14683 737 747 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00038118 164.66 By MS/MS 3 0 1 1 751600 751600 0 8231 1440 8515 20463 14406 14406 1 19621 0 LESFWALR APEDLRLLFYDEVSRLESFWALRVVCQEQL FYDEVSRLESFWALRVVCQEQLTALLAWIR R L E L R V 1 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 0 0 0 0 8 0 1020.5393 Q8N1F8 Q8N1F8 1043 1050 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.0069891 129.68 By MS/MS 3 0 1 1 209000 209000 0 8232 1899 8516 20464 14407 14407 1 5455.9 0 LESGSICK IVDKYKDMGTVVLGKLESGSICKGQQLVMM GTVVLGKLESGSICKGQQLVMMPNKHNVEV K L E C K G 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 8 0 892.43242 P15170 P15170 321 328 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 2 0.024577 101.33 By MS/MS 5 0 1 1 938080 938080 0 8233 597 8517 20465 14408 14408 1 38559 0 LESIATSDIPR ERAWKGGTESEMFNKLESIATSDIPRTPVL MFNKLESIATSDIPRTPVLGCCISRALEPS K L E P R T 1 1 0 1 0 0 1 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 11 0 1200.635 P54098 P54098 1061 1071 POLG DNA polymerase subunit gamma-1 yes yes 2 0.0009453 151.83 By MS/MS 3 0 1 1 746040 746040 0 8234 1011 8518 20466 14409 14409 1 19476 0 LESLILK VIGENRQVSQDLMQKLESLILKYIDLINLE VSQDLMQKLESLILKYIDLINLEEVGTICL K L E L K Y 0 0 0 0 0 0 1 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 7 0 814.51641 Q7L8L6 Q7L8L6 302 308 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.0034782 185.22 By MS/MS 5 0 1 1 1578700 1578700 0 8235 1770 8519 20467 14410 14410 1 64891 0 LESLNIQR RILARRQTIEERKERLESLNIQREKEELEQ IEERKERLESLNIQREKEELEQREAELQKV R L E Q R E 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 971.53999 Q14152 Q14152 582 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 2.0764E-08 225.57 By MS/MS By MS/MS 3 0.707 1 2 1 3 1 33554000 33353000 201290 8236 1409 8520 20468;20469;20470;20471 14411;14412;14413;14414 14413 4 894960 288490 LESNYTMPTEFLFVGFTDYLPLR ______________________________ TEFLFVGFTDYLPLRVTLFLVFLLVYTLTM M L E L R V 0 1 1 1 0 0 2 1 0 0 4 0 1 3 2 1 3 0 2 1 0 0 23 0 2752.3458 Q8N127 Q8N127 2 24 OR5AS1 Olfactory receptor 5AS1 yes yes 3 0.016469 42.64 By MS/MS 6 0 1 1 1846100 1846100 0 8237 1892 8521 20472 14415 14415 1288 1 14396 0 LESPTVSTLTPSSPGK ISPAALKKTLLDRVKLESPTVSTLTPSSPG ESPTVSTLTPSSPGKLLTRSLALGGKKD__ K L E G K L 0 0 0 0 0 0 1 1 0 0 2 1 0 0 3 4 3 0 0 1 0 0 16 0 1599.8356 Q96C36 Q96C36 292 307 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 2.3275E-07 160.38 By MS/MS By MS/MS 6.43 3.25 1 1 1 2 1 1 6 1 37801000 37664000 137320 8238 2136 8522 20473;20474;20475;20476;20477;20478;20479 14416;14417;14418;14419;14420 14419 5 2936000 1171500 LESQAGQQVSR SPGVHVRQTKEAPAKLESQAGQQVSRGARD APAKLESQAGQQVSRGARDRVRSMSGGHGL K L E S R G 1 1 0 0 0 3 1 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 11 0 1201.6051 P49815 P49815 1112 1122 TSC2 Tuberin yes yes 2 0.02823 82.494 By MS/MS 1.5 0.5 1 1 2 119980 119980 0 8239 935 8523 20480;20481 14421 14421 1 5938.5 0 LESTLNYGMER SEDGTVRIWHSSTYRLESTLNYGMERVWCV STYRLESTLNYGMERVWCVASLRGSNNVAL R L E E R V 0 1 1 0 0 0 2 1 0 0 2 0 1 0 0 1 1 0 1 0 0 0 11 0 1311.6129 P35606 P35606 263 273 COPB2 Coatomer subunit beta yes yes 2 0.00036288 148.32 By MS/MS 1.33 0.471 2 1 3 1251900 1251900 0 8240 795 8524;8525 20482;20483;20484 14422;14423 14423 544 2 61366 0 LESVSEDPTQLEEVEK VRDQAFKAIRSFLSKLESVSEDPTQLEEVE ESVSEDPTQLEEVEKDVHAASSPGMGGAAA K L E E K D 0 0 0 1 0 1 5 0 0 0 2 1 0 0 1 2 1 0 0 2 0 0 16 0 1830.8735 Q96KG9 Q96KG9 537 552 SCYL1 N-terminal kinase-like protein yes yes 2 8.3181E-06 175.74 By MS/MS 4.5 0.5 1 1 2 1240600 1240600 0 8241 2220 8526 20485;20486 14424 14424 1 36124 0 LETADAPAR LRKQKHGHRRYFVLKLETADAPARLEYYEN RYFVLKLETADAPARLEYYENARKFRHSVR K L E A R L 3 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 9 0 942.47706 O14654 O14654 100 108 IRS4 Insulin receptor substrate 4 yes yes 2 0.0016822 133.23 By MS/MS 2 0.816 1 1 1 3 1658600 1658600 0 8242 118 8527 20487;20488;20489 14425 14425 1 48958 0 LETADAPARLEYYENAR LRKQKHGHRRYFVLKLETADAPARLEYYEN TADAPARLEYYENARKFRHSVRAAAAAAAA K L E A R K 4 2 1 1 0 0 3 0 0 0 2 0 0 0 1 0 1 0 2 0 0 0 17 1 1980.9541 O14654 O14654 100 116 IRS4 Insulin receptor substrate 4 yes yes 3 0.010401 97.45 By MS/MS 3 0 1 1 976170 976170 0 8243 118 8528 20490 14426 14426 1 25483 0 LETFTPEDIVALYR CVTLELIINQLQGEKLETFTPEDIVALYRI KLETFTPEDIVALYRILQACTEKVDEHQTF K L E Y R I 1 1 0 1 0 0 2 0 0 1 2 0 0 1 1 0 2 0 1 1 0 0 14 0 1665.8614 Q14CZ7 Q14CZ7 248 261 FASTKD3 FAST kinase domain-containing protein 3 yes yes 2 1.9021E-05 171.92 By MS/MS 6 0 1 1 730980 730980 0 8244 1456 8529 20491 14427 14427 1 5700.2 0 LETVGSIFSR ______________________________ MAGSRLETVGSIFSRTRDLVRAGVLKEKPL R L E S R T 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 2 1 0 0 1 0 0 10 0 1107.5924 Q9Y3D9 Q9Y3D9 6 15 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2 3.2703E-07 191.45 By MS/MS By matching 9.33 0.471 2 1 2 1 15944000 15893000 51604 8245 2935 8530 20492;20493;20494 14428;14429 14428 2 9120900 556140 LETYENAR ECCPTSVELWLALARLETYENARKVLNKAR LWLALARLETYENARKVLNKARENIPTDRH R L E A R K 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 8 0 994.47197 O94906 O94906 443 450 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0029415 150.4 By MS/MS 4.5 0.5 1 1 2 1244200 1244200 0 8246 358 8531 20495;20496 14430 14430 1 35934 0 LEVAPISDIIAIK ASAFGKNLLPRVAAKLEVAPISDIIAIKSP AKLEVAPISDIIAIKSPDTFVRTIYAGNAL K L E I K S 2 0 0 1 0 0 1 0 0 4 1 1 0 0 1 1 0 0 0 1 0 0 13 0 1380.8228 P13804 P13804 127 139 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.00096287 131.83 By MS/MS 7.5 0.5 1 1 2 3009200 3009200 0 8247 582 8532 20497;20498 14431 14431 1 197090 0 LEVDIPLVK NFMQAFLNVLDQCPKLEVDIPLVKSYLAQF LDQCPKLEVDIPLVKSYLAQFAARAIISEL K L E V K S 0 0 0 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 2 0 0 9 0 1024.6168 P78344 P78344 632 640 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0053784 114.89 By MS/MS 4 0.816 1 1 1 3 6864900 6864900 0 8248 1192 8533 20499;20500;20501 14432;14433 14432 2 194620 0 LEVDYSIGR YADVLRGSLDQRNQRLEVDYSIGRDIQRQD DQRNQRLEVDYSIGRDIQRQDLSAIARTLQ R L E G R D 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1050.5346 Q9UBW8 Q9UBW8 152 160 COPS7A COP9 signalosome complex subunit 7a yes yes 2 0.042156 84.213 By MS/MS 8 0 1 1 714740 714740 0 8249 2760 8534 20502 14434 14434 1 47151 0 LEVIFADLAR SMALPSGQVCHDQQRLEVIFADLARRKDDA HDQQRLEVIFADLARRKDDAQQRSWALYED R L E A R R 2 1 0 1 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 1 0 0 10 0 1145.6445 Q9NZQ3 Q9NZQ3 382 391 NCKIPSD NCK-interacting protein with SH3 domain yes yes 2 0.0001219 163.16 By MS/MS 5.5 0.5 1 1 2 1421300 1421300 0 8250 2715 8535 20503;20504 14435 14435 1 48754 0 LEWLSLLSDAEK DWFPLQGGQGQVHLRLEWLSLLSDAEKLEQ HLRLEWLSLLSDAEKLEQVLQWNWGVSSRP R L E E K L 1 0 0 1 0 0 2 0 0 0 4 1 0 0 0 2 0 1 0 0 0 0 12 0 1402.7344 Q9BSJ8 Q9BSJ8 446 457 ESYT1 Extended synaptotagmin-1 yes yes 2 0.021789 83.883 By MS/MS 3.5 0.5 1 1 2 72213 72213 0 8251 2339 8536 20505;20506 14436 14436 1 1921.4 0 LEYLQIPPVSR ______________________________ QSLRLEYLQIPPVSRAYTTACVLTTAAVQL R L E S R A 0 1 0 0 0 1 1 0 0 1 2 0 0 0 2 1 0 0 1 1 0 0 11 0 1313.7343 Q9GZP9 Q9GZP9 8 18 DERL2 Derlin-2 yes yes 2 0.0061384 102.95 By MS/MS 1 0 1 1 150980 150980 0 8252 2440 8537 20507 14437 14437 1 7376.5 0 LEYYENAR RYFVLKLETADAPARLEYYENARKFRHSVR TADAPARLEYYENARKFRHSVRAAAAAAAA R L E A R K 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 8 0 1056.4876 O14654 O14654 109 116 IRS4 Insulin receptor substrate 4 yes yes 2 0.01563 112.41 By MS/MS 4 1.41 1 1 1 1 1 5 2443900 2443900 0 8253 118 8538 20508;20509;20510;20511;20512 14438 14438 1 63999 0 LFACMNPATDVGK DRGDTEPLVRHPDFRLFACMNPATDVGKRN FRLFACMNPATDVGKRNLPPGIRNRFTELY R L F G K R 2 0 1 1 1 0 0 1 0 0 1 1 1 1 1 0 1 0 0 1 0 0 13 0 1422.6636 Q9NU22 Q9NU22 879 891 MDN1 Midasin yes yes 2 0.026227 76.165 By MS/MS 1 0 1 1 257460 257460 0 8254 2635 8539 20513 14439 14439 1560 1 12579 0 LFADAEEEQR ILNKYVGESEANIRKLFADAEEEQRRLGAN ANIRKLFADAEEEQRRLGANSGLHIIIFDE K L F Q R R 2 1 0 1 0 1 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 10 0 1206.5517 P46459 P46459 305 314 NSF Vesicle-fusing ATPase yes yes 2 0.00072888 135.43 By MS/MS 5.5 0.5 1 1 2 2509800 2509800 0 8255 881 8540 20514;20515 14440 14440 1 85374 0 LFADAVQELLPQYK ELVDSICENARRYAKLFADAVQELLPQYKE KLFADAVQELLPQYKEREVVNKDVLDVYIE K L F Y K E 2 0 0 1 0 2 1 0 0 0 3 1 0 1 1 0 0 0 1 1 0 0 14 0 1633.8716 P33993 P33993 76 89 MCM7 DNA replication licensing factor MCM7 yes yes 2 3.3958E-18 225.55 By MS/MS 5.5 0.5 1 1 2 2035300 2035300 0 8256 775 8541 20516;20517 14441;14442 14442 2 17557 0 LFAIEEETTTR EFEVLKKLNHKNIVKLFAIEEETTTRHKVL NIVKLFAIEEETTTRHKVLIMEFCPCGSLY K L F T R H 1 1 0 0 0 0 3 0 0 1 1 0 0 1 0 0 3 0 0 0 0 0 11 0 1308.6561 Q9UHD2 Q9UHD2 70 80 TBK1 Serine/threonine-protein kinase TBK1 yes yes 2 1.8928E-07 192.26 By MS/MS 4.5 0.5 1 1 2 1019500 1019500 0 8257 2780 8542 20518;20519 14443 14443 1 40710 0 LFCVGFTK EAHVDVKTTDGYLLRLFCVGFTKKRNNQIR TDGYLLRLFCVGFTKKRNNQIRKTSYAQHQ R L F T K K 0 0 0 0 1 0 0 1 0 0 1 1 0 2 0 0 1 0 0 1 0 0 8 0 970.49462 P61247 P61247 137 144 RPS3A 40S ribosomal protein S3a yes yes 2 0.0090507 121.99 By MS/MS 8 0 1 1 1751300 1751300 0 8258 1094 8543 20520 14444 14444 1 115530 0 LFDAPEAPLPSR NLDDYLHLLLPPIVKLFDAPEAPLPSRKAA IVKLFDAPEAPLPSRKAALETVDRLTESLD K L F S R K 2 1 0 1 0 0 1 0 0 0 2 0 0 1 3 1 0 0 0 0 0 0 12 0 1311.6823 P42345 P42345 1121 1132 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.0038511 111.86 By MS/MS 2.5 1.12 1 1 1 1 4 2324400 2324400 0 8259 849 8544 20521;20522;20523;20524 14445;14446;14447 14445 3 88574 0 LFDDSTVTTVDESQVVTR LPNDRSSQRSDVGWRLFDDSTVTTVDESQV DSTVTTVDESQVVTRYAYVLFYRRRNSPVE R L F T R Y 0 1 0 3 0 1 1 0 0 0 1 0 0 1 0 2 4 0 0 4 0 0 18 0 2010.9746 O94966 O94966 1187 1204 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 0.00014114 130.47 By MS/MS 3.5 0.5 1 1 2 1118900 1118900 0 8260 361 8545 20525;20526 14448 14448 1 29876 0 LFDDVPQVR NGKSVDDVLSHFAQRLFDDVPQVRRAVASV SHFAQRLFDDVPQVRRAVASVVGGWLLCLR R L F V R R 0 1 0 2 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 9 0 1087.5662 Q86Y56 Q86Y56 254 262 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.014571 99.802 By MS/MS 4.5 0.5 1 1 2 4198800 4198800 0 8261 1844 8546 20527;20528 14449;14450 14450 2 150810 0 LFDFVNAK TQYTFSSIEREEYGKLFDFVNAKKLNIKNR EREEYGKLFDFVNAKKLNIKNRGLKEGMNP K L F A K K 1 0 1 1 0 0 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 952.50182 Q08945 Q08945 414 421 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.012293 116.73 By MS/MS 5 0.816 1 1 1 3 1580700 1580700 0 8262 1291 8547 20529;20530;20531 14451 14451 1 46420 0 LFDNTVGAYR FYFLLDKTGHFPNTKLFDNTVGAYRSL___ FPNTKLFDNTVGAYRSL_____________ K L F Y R S 1 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 1 1 0 0 10 0 1154.572 A0PJW6 A0PJW6 191 200 TMEM223 Transmembrane protein 223 yes yes 2 1.3439E-06 178.55 By MS/MS 9 0.816 1 1 1 3 6270100 6270100 0 8263 7 8548 20532;20533;20534 14452 14452 1 4473900 0 LFDQAFGLPR GPSWDPFRDWYPHSRLFDQAFGLPRLPEEW YPHSRLFDQAFGLPRLPEEWSQWLGGSSWP R L F P R L 1 1 0 1 0 1 0 1 0 0 2 0 0 2 1 0 0 0 0 0 0 0 10 0 1162.6135 P04792 P04792 28 37 HSPB1 Heat shock protein beta-1 yes yes 2 1.244E-10 204.79 By MS/MS 8 0 1 1 2895100 2895100 0 8264 456 8549 20535 14453;14454 14453 2 190990 0 LFDQPGDPLK IGIEPSLATYHHIIRLFDQPGDPLKRSSFI HHIIRLFDQPGDPLKRSSFIIYDIMNELMG R L F L K R 0 0 0 2 0 1 0 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 10 0 1128.5815 Q96EY7 Q96EY7 378 387 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.0048974 107.79 By MS/MS 5 0 1 1 1156500 1156500 0 8265 2170 8550 20536 14455 14455 1 47538 0 LFDQPGDPLKR IGIEPSLATYHHIIRLFDQPGDPLKRSSFI HIIRLFDQPGDPLKRSSFIIYDIMNELMGK R L F K R S 0 1 0 2 0 1 0 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 11 1 1284.6826 Q96EY7 Q96EY7 378 388 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.010156 117.71 By MS/MS 5 0 1 1 3973300 3973300 0 8266 2170 8551 20537 14456 14456 1 163320 0 LFDSTTLEHQK DMTMFVTASKDNTAKLFDSTTLEHQKTFRT NTAKLFDSTTLEHQKTFRTERPVNSAALSP K L F Q K T 0 0 0 1 0 1 1 0 1 0 2 1 0 1 0 1 2 0 0 0 0 0 11 0 1317.6565 Q13347 Q13347 214 224 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3 2.7394E-05 171.56 By MS/MS By MS/MS 8 0.953 4 4 2 1 7 4 67338000 66907000 430860 8267 1358 8552 20538;20539;20540;20541;20542;20543;20544;20545;20546;20547;20548 14457;14458;14459;14460;14461 14461 5 3467900 3371000 LFDTPQAK PQIYWFCLLCRKAVRLFDTPQAKKDG____ LCRKAVRLFDTPQAKKDG____________ R L F A K K 1 0 0 1 0 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 8 0 918.48108 Q8TBR7 Q8TBR7 247 254 FAM57A Protein FAM57A yes yes 2 0.0069891 129.68 By MS/MS 1.5 0.5 1 1 2 1977000 1977000 0 8268 1990 8553 20549;20550 14462;14463 14462 2 96880 0 LFEAEAQDLFR GSFWAQPLQNTDNRRLFEAEAQDLFRDIQS DNRRLFEAEAQDLFRDIQSLPQKAAVRKLN R L F F R D 2 1 0 1 0 1 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 11 0 1337.6616 Q9H223 Q9H223 273 283 EHD4 EH domain-containing protein 4 yes yes 2 0.00057102 139.86 By MS/MS 5 0 1 1 479460 479460 0 8269 2470 8554 20551 14464 14464 1 19708 0 LFEAQGKPELK EIEKLRKQLKVKVNRLFEAQGKPELKGFNL KVNRLFEAQGKPELKGFNLNPLNQDELKAL R L F L K G 1 0 0 0 0 1 2 1 0 0 2 2 0 1 1 0 0 0 0 0 0 0 11 1 1258.6921 Q9NUG6 Q9NUG6 102 112 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 2 0.023836 115.18 By MS/MS 10 0 1 1 150830 150830 0 8270 2636 8555 20552 14465 14465 1 160320 0 LFEASIETGDR GATGVFTNSSWLWNKLFEASIETGDRVWRM LWNKLFEASIETGDRVWRMPLFEHYTRQVV K L F D R V 1 1 0 1 0 0 2 1 0 1 1 0 0 1 0 1 1 0 0 0 0 0 11 0 1236.5986 P28838 P28838 418 428 LAP3 Cytosol aminopeptidase yes yes 2 0.00010709 160.75 By MS/MS 6.5 0.5 1 1 2 3542000 3542000 0 8271 722 8556 20553;20554 14466 14466 1 31932 0 LFECDRDQMYYNLLK NQVETLEKLVELTQKLFECDRDQMYYNLLK LFECDRDQMYYNLLKLYKINGDWQRADAVW K L F L K L 0 1 1 2 1 1 1 0 0 0 3 1 1 1 0 0 0 0 2 0 0 0 15 1 2006.923 P42704 P42704 949 963 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.050783 56.286 By MS/MS 3.5 0.5 1 1 2 10068000 10068000 0 8272 854 8557 20555;20556 14467 14467 1 263530 0 LFEELGK QPIKIRFQESEERPKLFEELGKQIQQYMKI QESEERPKLFEELGKQIQQYMKIISSFKNK K L F G K Q 0 0 0 0 0 0 2 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 7 0 834.44872 P34932 P34932 698 704 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 0.035671 111.04 By MS/MS 4 0 1 1 463070 463070 0 8273 778 8558 20557 14468 14468 1 12641 0 LFEEPEDPSNR LCDMRASALCDRHSKLFEEPEDPSNRSFFS RHSKLFEEPEDPSNRSFFSEIISSISDVKF K L F N R S 0 1 1 1 0 0 3 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 11 0 1331.5994 P63151;Q9Y2T4 P63151 268 278 PPP2R2A;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform yes no 2 0.021714 87.806 By MS/MS 6.5 0.5 1 1 2 3534200 3534200 0 8274 1170 8559 20558;20559 14469 14469 1 33673 0 LFEFAGYDVLR VGHLRSTIIGESISRLFEFAGYDVLRLNHV SISRLFEFAGYDVLRLNHVGDWGTQFGMLI R L F L R L 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 0 0 0 1 1 0 0 11 0 1328.6765 P54136 P54136 224 234 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.00018827 155.42 By MS/MS 5 0.816 1 1 1 3 1229300 1229300 0 8275 1013 8560 20560;20561;20562 14470;14471 14470 2 27847 0 LFEGNALLR AARELLTLDEKDPRRLFEGNALLRRLVRIG EKDPRRLFEGNALLRRLVRIGVLDEGKMKL R L F L R R 1 1 1 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1031.5764 P46781 P46781 71 79 RPS9 40S ribosomal protein S9 yes yes 2 1.5424E-06 190.26 By MS/MS 8 1.41 1 1 1 1 1 5 28589000 28589000 0 8276 887 8561 20563;20564;20565;20566;20567 14472;14473;14474 14473 3 8660600 0 LFEISDIVIK LKTIAANRKMPLPLKLFEISDIVIKDSNTD PLPLKLFEISDIVIKDSNTDVGAKNYRHLC K L F I K D 0 0 0 1 0 0 1 0 0 3 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1175.6802 Q9NSD9 Q9NSD9 474 483 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.0011141 120.15 By MS/MS 5 0 1 1 158170 158170 0 8277 2623 8562 20568 14475 14475 1 6501.6 0 LFELLEK PKQPNVQDFQFFPPRLFELLEKEILFYRKT DFQFFPPRLFELLEKEILFYRKTIGYKVPR R L F E K E 0 0 0 0 0 0 2 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 7 0 890.51132 O60264;P28370 O60264 781 787 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.017299 133.81 By MS/MS 3 0 1 1 1661500 1661500 0 8278 240;720 8563 20569 14476 14476 1 43373 0 LFEMAYK NIRQAASSLQQASLKLFEMAYKKMASEREG SLQQASLKLFEMAYKKMASEREGSGSSGTG K L F Y K K 1 0 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 1 0 0 0 7 0 900.44153 P38646 P38646 647 653 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.049192 101.69 By MS/MS 5 0 1 1 1117600 1117600 0 8279 820 8564 20570 14477 14477 1 45938 0 LFEMAYKK NIRQAASSLQQASLKLFEMAYKKMASEREG LQQASLKLFEMAYKKMASEREGSGSSGTGE K L F K K M 1 0 0 0 0 0 1 0 0 0 1 2 1 1 0 0 0 0 1 0 0 0 8 1 1028.5365 P38646 P38646 647 654 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.04028 98.523 By MS/MS 5 0 1 1 778270 778270 0 8280 820 8565 20571 14478 14478 1 31990 0 LFENYIELK ITQVSMASLKELDQRLFENYIELKADPIVG KELDQRLFENYIELKADPIVGSLEPGIYAG R L F L K A 0 0 1 0 0 0 2 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1167.6176 Q96KP1 Q96KP1 759 767 EXOC2 Exocyst complex component 2 yes yes 2 2.8257E-06 185.6 By MS/MS 4 0 1 1 1398100 1398100 0 8281 2221 8566 20572 14479 14479 1 38166 0 LFEPLVIK TKNRADKNAIHNHIRLFEPLVIKALKQYTT AIHNHIRLFEPLVIKALKQYTTTTCVQLQK R L F I K A 0 0 0 0 0 0 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 8 0 957.5899 P42858 P42858 1424 1431 HTT Huntingtin yes yes 2 0.013273 115.46 By MS/MS 1.5 0.5 1 1 2 596360 596360 0 8282 858 8567 20573;20574 14480 14480 1 29240 0 LFEQNVQR PLNKEAAEVLQNNRRLFEQNVQRSMRGGYI VLQNNRRLFEQNVQRSMRGGYIGSTYFERC R L F Q R S 0 1 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 1032.5352 P61081 P61081 159 166 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.0026636 152.47 By MS/MS 9.5 0.5 1 1 2 8000900 8000900 0 8283 1086 8568 20575;20576 14481;14482 14481 2 4933100 0 LFESMLSECR EAAIVQAESEETKERLFESMLSECRDAIQV ETKERLFESMLSECRDAIQVVREELKPDQK R L F C R D 0 1 0 0 1 0 2 0 0 0 2 0 1 1 0 2 0 0 0 0 0 0 10 0 1270.5686 Q9UHB9 Q9UHB9 336 345 SRP68 Signal recognition particle subunit SRP68 yes yes 2 1.7498E-07 193.38 By MS/MS 5 0 1 1 1043900 1043900 0 8284 2779 8569 20577 14483 14483 1 42909 0 LFEVIETEK EVRIMKGLNHPNIVKLFEVIETEKTLYLVM HPNIVKLFEVIETEKTLYLVMEYASAGEVF K L F E K T 0 0 0 0 0 0 3 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 9 0 1106.5859 Q96L34;P27448;Q7KZI7;Q9P0L2 Q96L34 121 129 MARK4;MARK3;MARK2;MARK1 MAP/microtubule affinity-regulating kinase 4;MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK2;Serine/threonine-protein kinase MARK1 yes no 2 0.0063188 112.84 By MS/MS 4.5 0.5 1 1 2 2034000 2034000 0 8285 705 8570 20578;20579 14484 14484 1 78837 0 LFFWMQEPK SGRVYVLKFKAGSKRLFFWMQEPKTDQDEE KAGSKRLFFWMQEPKTDQDEEHCRKVNEYL R L F P K T 0 0 0 0 0 1 1 0 0 0 1 1 1 2 1 0 0 1 0 0 0 0 9 0 1224.6002 Q16186 Q16186 105 113 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 0.020979 90.709 By MS/MS 7 0 1 1 252160 252160 0 8286 1531 8571 20580 14485 14485 1167 1 4506.2 0 LFGALTPLEPR MTSSTNNWVLIKIIKLFGALTPLEPRLGKK KIIKLFGALTPLEPRLGKKLIEPLTNLIHS K L F P R L 1 1 0 0 0 0 1 1 0 0 3 0 0 1 2 0 1 0 0 0 0 0 11 0 1212.6867 O14617 O14617 244 254 AP3D1 AP-3 complex subunit delta-1 yes yes 2 0.0035767 113.71 By MS/MS 4 0.816 1 1 1 3 401500 401500 0 8287 117 8572 20581;20582;20583 14486 14486 1 11701 0 LFGAPEPSTIAR PPRFQQVPTDALANKLFGAPEPSTIARSLP ANKLFGAPEPSTIARSLPTTVPESPNYRNT K L F A R S 2 1 0 0 0 0 1 1 0 1 1 0 0 1 2 1 1 0 0 0 0 0 12 0 1257.6717 Q6PKG0 Q6PKG0 754 765 LARP1 La-related protein 1 yes yes 2 0.0058286 89.029 By MS/MS 3 0.816 1 1 1 3 3090300 3090300 0 8288 1719 8573 20584;20585;20586 14487 14487 1 82919 0 LFGDVEASLGR KTFIRGAECTERIHRLFGDVEASLGRLLDR RIHRLFGDVEASLGRLLDRLPSFQQSCRNF R L F G R L 1 1 0 1 0 0 1 2 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1162.5982 Q96MW5 Q96MW5 103 113 COG8 Conserved oligomeric Golgi complex subunit 8 yes yes 2 0.00037736 147.73 By MS/MS 5 0 1 1 544130 544130 0 8289 2228 8574 20587 14488 14488 1 22366 0 LFGEVTRPTNSK SLSEYAFRMSRLSARLFGEVTRPTNSKSMK SARLFGEVTRPTNSKSMKVVKLFSELPLAK R L F S K S 0 1 1 0 0 0 1 1 0 0 1 1 0 1 1 1 2 0 0 1 0 0 12 1 1347.7147 Q9Y291 Q9Y291 18 29 MRPS33 28S ribosomal protein S33, mitochondrial yes yes 2 0.00049453 180.19 By MS/MS 10 0 1 1 1466600 1466600 0 8290 2879 8575 20588 14489 14489 1 1558800 0 LFGLLVK AFSVGQQLVFSFNEKLFGLLVKDIEAMDPS LVFSFNEKLFGLLVKDIEAMDPSILKGEPA K L F V K D 0 0 0 0 0 0 0 1 0 0 3 1 0 1 0 0 0 0 0 1 0 0 7 0 788.51601 P46459 P46459 144 150 NSF Vesicle-fusing ATPase yes yes 2 0.030416 114.67 By MS/MS 5 0 1 1 1261300 1261300 0 8291 881 8576 20589 14490 14490 1 51846 0 LFGLPNDS KDGKYDSSREAGTVKLFGLPNDS_______ REAGTVKLFGLPNDS_______________ K L F D S - 0 0 1 1 0 0 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 8 0 861.42323 Q96J01 Q96J01 344 351 THOC3 THO complex subunit 3 yes yes 1 0.036712 82.671 By MS/MS 7.5 0.5 1 1 2 2864600 2864600 0 8292 2204 8577 20590;20591 14491 14491 1 163710 0 LFHNTPGHR ITGRFLASCGDRAVRLFHNTPGHRAMVEEM GDRAVRLFHNTPGHRAMVEEMQGHLKRASN R L F H R A 0 1 1 0 0 0 0 1 2 0 1 0 0 1 1 0 1 0 0 0 0 0 9 0 1077.5468 Q9Y4P3 Q9Y4P3 398 406 TBL2 Transducin beta-like protein 2 yes yes 3 0.0049641 106.68 By MS/MS 7 0 1 1 1238400 1238400 0 8293 2957 8578 20592 14492 14492 1 22131 0 LFIEDLAIK VKFLCLLDGSNMSHKLFIEDLAIKLLDKDE SNMSHKLFIEDLAIKLLDKDELVSKSKKRY K L F I K L 1 0 0 1 0 0 1 0 0 2 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1060.6168 Q13395 Q13395 1136 1144 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.0056594 114.28 By MS/MS By matching 3 0.816 1 1 1 2 1 756780 741560 15220 8294 1362 8579 20593;20594;20595 14493 14493 1 19397 12814 LFIFETFCR FFLVACLEDFIENARLFIFETFCRIHQCIS FIENARLFIFETFCRIHQCISINMLADKLN R L F C R I 0 1 0 0 1 0 1 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 9 0 1231.606 P60228 P60228 338 346 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 4.4622E-23 253.18 By MS/MS 6.5 0.5 1 1 2 6626700 6626700 0 8295 1065 8580 20596;20597 14494 14494 1 52087 0 LFIGGLNTETNEK ______________________________ GKLFIGGLNTETNEKALETVFGKYGRIVEV K L F E K A 0 0 2 0 0 0 2 2 0 1 2 1 0 1 0 0 2 0 0 0 0 0 13 0 1434.7355 Q96E39;P38159 Q96E39 10 22 RBMXL1;RBMX RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 1.7347E-08 194.12 By MS/MS 7 0 1 1 1350500 1350500 0 8296 817 8581 20598 14495 14495 1 24133 0 LFIVESNSSSSTR KINPDEREEMKVSAKLFIVESNSSSSTRSA AKLFIVESNSSSSTRSAVDMACSVLGVAQL K L F T R S 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 5 1 0 0 1 0 0 13 0 1425.71 P48507 P48507 95 107 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 2 1.3738E-34 254.19 By MS/MS 8 0 1 1 2262000 2262000 0 8297 905 8582 20599 14496 14496 1 149220 0 LFKPPQPPAR QSRGEPPLPEEDLSKLFKPPQPPARMDSLL EDLSKLFKPPQPPARMDSLLIAGQINTYCQ K L F A R M 1 1 0 0 0 1 0 0 0 0 1 1 0 1 4 0 0 0 0 0 0 0 10 1 1149.6659 O15372 O15372 304 313 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2;3 0.031838 93.143 By MS/MS 6.67 0.471 1 2 3 8943200 8943200 0 8298 173 8583 20600;20601;20602 14497;14498 14497 2 156950 0 LFLAGYDPTPTMR IMDGAPVKGESIPIRLFLAGYDPTPTMRDV IRLFLAGYDPTPTMRDVNKKFSVRYFLNLV R L F M R D 1 1 0 1 0 0 0 1 0 0 2 0 1 1 2 0 2 0 1 0 0 0 13 0 1480.7384 O75436 O75436 250 262 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 6.7606E-05 155.15 By MS/MS 7 0 1 1 5676400 5676400 0 8299 309 8584 20603 14499 14499 170 1 101440 0 LFLCVLPQDK NGQLRSSRFRSICWKLFLCVLPQDKSQWIS SICWKLFLCVLPQDKSQWISRIEELRAWYS K L F D K S 0 0 0 1 1 1 0 0 0 0 3 1 0 1 1 0 0 0 0 1 0 0 10 0 1231.6635 Q92609 Q92609 93 102 TBC1D5 TBC1 domain family member 5 yes yes 2 0.00099253 123.21 By MS/MS 4 0 1 1 229960 229960 0 8300 2066 8585 20604 14500 14500 1 6277.5 0 LFLEIVSEK GLVDVRIPHNNFYRKLFLEIVSEKSRYSLH NNFYRKLFLEIVSEKSRYSLHQNMDKIKVP K L F E K S 0 0 0 0 0 0 2 0 0 1 2 1 0 1 0 1 0 0 0 1 0 0 9 0 1076.6118 Q9BV23 Q9BV23 246 254 ABHD6 Monoacylglycerol lipase ABHD6 yes yes 2 0.0053784 114.89 By MS/MS 8 0 1 1 408390 408390 0 8301 2370 8586 20605 14501 14501 1 26941 0 LFLELEPQVR RQELQRNVISSSSFKLFLELEPQVRDIIFK SSSFKLFLELEPQVRDIIFKFYESKYASCL K L F V R D 0 1 0 0 0 1 2 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 10 0 1242.6972 Q13098 Q13098 318 327 GPS1 COP9 signalosome complex subunit 1 yes yes 2 0.00040831 159.58 By MS/MS 5 0.816 1 1 1 3 8494000 8494000 0 8302 1333 8587 20606;20607;20608 14502;14503 14503 2 75292 0 LFLESSDANPVR FALRYFKDTSPVFQRLFLESSDANPVRYGR FQRLFLESSDANPVRYGRRRMKLRDLMEAA R L F V R Y 1 1 1 1 0 0 1 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 12 0 1346.683 Q9NU22 Q9NU22 126 137 MDN1 Midasin yes yes 2 3.2006E-05 169.93 By MS/MS 2 1 1 1 2 1512900 1512900 0 8303 2635 8588 20609;20610 14504;14505 14504 2 63321 0 LFLFGEEPSK RHEDQLEVTREPARRLFLFGEEPSKLDQDV EPARRLFLFGEEPSKLDQDVLAALECADVD R L F S K L 0 0 0 0 0 0 2 1 0 0 2 1 0 2 1 1 0 0 0 0 0 0 10 0 1165.6019 Q86XL3 Q86XL3 824 833 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0041039 116.05 By MS/MS 4 0 1 1 252440 252440 0 8304 1841 8589 20611 14506 14506 1 6891.3 0 LFLLQDSGR LGPLVAAACSDGAVRLFLLQDSGRILQLLA SDGAVRLFLLQDSGRILQLLAETFHHKRCV R L F G R I 0 1 0 1 0 1 0 1 0 0 3 0 0 1 0 1 0 0 0 0 0 0 9 0 1047.5713 Q9NNW5 Q9NNW5 890 898 WDR6 WD repeat-containing protein 6 yes yes 2 0.0094652 117.89 By MS/MS 1 0 1 1 251580 251580 0 8305 2571 8590 20612 14507 14507 1 12292 0 LFLNETQTQEITEDIPVK YEAAKVFGLRSRKLKLFLNETQTQEITEDI NETQTQEITEDIPVKTLNMKTVYVSVLPTT K L F V K T 0 0 1 1 0 2 3 0 0 2 2 1 0 1 1 0 3 0 0 1 0 0 18 0 2117.0892 P41252 P41252 1227 1244 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 5.7613E-69 298.78 By MS/MS 3 0 1 1 592680 592680 0 8306 840 8591 20613 14508 14508 1 15472 0 LFLQGPK DFTATFGPLDSLNTRLFLQGPKIAEEFEVE PLDSLNTRLFLQGPKIAEEFEVELERGKTL R L F P K I 0 0 0 0 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 0 7 0 801.47487 P11498 P11498 1037 1043 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.044015 105.27 By MS/MS 4 0.816 1 1 1 3 4095000 4095000 0 8307 555 8592 20614;20615;20616 14509 14509 1 114620 0 LFLSMDPVHGDISR IDGSTPTITPNPNFRLFLSMDPVHGDISRA RLFLSMDPVHGDISRAMRNRGLEIYISGEG R L F S R A 0 1 0 2 0 0 0 1 1 1 2 0 1 1 1 2 0 0 0 1 0 0 14 0 1585.7923 Q9NU22 Q9NU22 2288 2301 MDN1 Midasin yes yes 2 0.0057105 97.214 By MS/MS 1 0 1 1 156630 156630 0 8308 2635 8593 20617 14510 14510 1561 1 7652.8 0 LFLTMEINPK LEKKLHSLQPHACFRLFLTMEINPKVPVNL HACFRLFLTMEINPKVPVNLLRAGRIFVFE R L F P K V 0 0 1 0 0 0 1 0 0 1 2 1 1 1 1 0 1 0 0 0 0 0 10 0 1204.6526 Q14204 Q14204 4124 4133 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0047368 101.46 By MS/MS 2.5 1.12 1 1 1 1 4 1500200 1500200 0 8309 1421 8594 20618;20619;20620;20621 14511;14512 14511 1108 2 68207 0 LFLVDDLVDSLK SALGHVNCTIKELRRLFLVDDLVDSLKFAV LRRLFLVDDLVDSLKFAVLMWVFTYVGALF R L F L K F 0 0 0 3 0 0 0 0 0 0 4 1 0 1 0 1 0 0 0 2 0 0 12 0 1375.7599 Q9NQC3 Q9NQC3 1109 1120 RTN4 Reticulon-4 yes yes 2 6.3333E-11 201.33 By MS/MS 6 0 1 1 153900 153900 0 8310 2587 8595 20622 14513 14513 1 1200.1 0 LFMAQALQEYNN YCQNIKEFTAQNLGKLFMAQALQEYNN___ LGKLFMAQALQEYNN_______________ K L F N N - 2 0 2 0 0 2 1 0 0 0 2 0 1 1 0 0 0 0 1 0 0 0 12 0 1440.6708 O15372 O15372 341 352 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 2.2914E-44 286.73 By MS/MS By MS/MS 7.86 0.833 3 2 2 6 1 9632300 9550700 81579 8311 173 8596;8597 20623;20624;20625;20626;20627;20628;20629 14514;14515;14516;14517;14518 14517 105 4 345370 334900 LFNIHED IKDGEQHEDLNEVAKLFNIHED________ EDLNEVAKLFNIHED_______________ K L F E D - 0 0 1 1 0 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 886.41848 O95831 O95831 607 613 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.019099 128.86 By MS/MS 5.5 1.12 1 1 1 1 4 34189000 34189000 0 8312 409 8598 20630;20631;20632;20633 14519 14519 1 1298400 0 LFNLSKEDDVR VPRRLGPKRASRIRKLFNLSKEDDVRQYVV RIRKLFNLSKEDDVRQYVVRKPLNKEGKKP K L F V R Q 0 1 1 2 0 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 11 1 1334.683 P62753 P62753 144 154 RPS6 40S ribosomal protein S6 yes yes 2;3 0.00092733 157.97 By MS/MS By matching 8 0 4 2 2 8966900 8909600 57310 8313 1143 8599 20634;20635;20636;20637 14520;14521 14521 2 587760 488920 LFNTAVCESK AIDSSHPWLHECMIRLFNTAVCESKDLSDT ECMIRLFNTAVCESKDLSDTVRTVLKQEMN R L F S K D 1 0 1 0 1 0 1 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 10 0 1167.5594 Q9BXJ9 Q9BXJ9 715 724 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 2 1.2223E-06 180.09 By MS/MS 4 0 1 1 2020300 2020300 0 8314 2401 8600 20638 14522;14523 14522 2 55151 0 LFPGFEIETVK CRDVPLHALYDNVEKLFPGFEIETVKNNLR NVEKLFPGFEIETVKNNLRILFNNAVKKRL K L F V K N 0 0 0 0 0 0 2 1 0 1 1 1 0 2 1 0 1 0 0 1 0 0 11 0 1278.686 P08243 P08243 222 232 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 2 0.03773 79.974 By MS/MS 6 0.816 1 1 1 3 4627900 4627900 0 8315 503 8601 20639;20640;20641 14524 14524 1 39907 0 LFPSASATEAIQR GSSVDSAPPPGRHGRLFPSASATEAIQRHR GRLFPSASATEAIQRHRRNLAEWFSRLPRE R L F Q R H 3 1 0 0 0 1 1 0 0 1 1 0 0 1 1 2 1 0 0 0 0 0 13 0 1389.7252 Q86UT6 Q86UT6 69 81 NLRX1 NLR family member X1 yes yes 2 0.00027715 144.55 By MS/MS 4.5 0.5 1 1 2 2798600 2798600 0 8316 1825 8602 20642;20643 14525 14525 1 80708 0 LFQDRLVEDEER PVEGLIRIWAHEALRLFQDRLVEDEERRWT ALRLFQDRLVEDEERRWTDENIDTVALKHF R L F E R R 0 2 0 2 0 1 3 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 12 1 1547.758 Q14204 Q14204 2832 2843 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0095567 99.539 By MS/MS 1 0 1 1 274460 274460 0 8317 1421 8603 20644 14526 14526 1 13410 0 LFQEDDEIPLYLK ASRRHFKNKVPEKQKLFQEDDEIPLYLKGG QKLFQEDDEIPLYLKGGVADALLYRATMIL K L F L K G 0 0 0 2 0 1 2 0 0 1 3 1 0 1 1 0 0 0 1 0 0 0 13 0 1621.8239 P14406 P14406 34 46 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial yes yes 2 0.00086361 133.05 By MS/MS 10 0 1 1 304810 304810 0 8318 587 8604 20645 14527 14527 1 323980 0 LFQLYPR DNLEKYGFEPTQEGKLFQLYPRNFLR____ FEPTQEGKLFQLYPRNFLR___________ K L F P R N 0 1 0 0 0 1 0 0 0 0 2 0 0 1 1 0 0 0 1 0 0 0 7 0 935.52289 Q8IXM3 Q8IXM3 127 133 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.020051 126.24 By MS/MS 10 0 1 1 2136200 2136200 0 8319 1873 8605 20646 14528 14528 1 2270600 0 LFQSNDPTLR LGTTEATEAFFAMTKLFQSNDPTLRRMCYL FAMTKLFQSNDPTLRRMCYLTIKEMSCIAE K L F L R R 0 1 1 1 0 1 0 0 0 0 2 0 0 1 1 1 1 0 0 0 0 0 10 0 1189.6091 Q9Y678 Q9Y678 76 85 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0049993 107.45 By MS/MS 4.5 0.5 1 1 2 8667300 8667300 0 8320 2996 8606 20647;20648 14529 14529 1 249170 0 LFQSNDQTLR FGTTEATEAFFAMTRLFQSNDQTLRRMCYL FAMTRLFQSNDQTLRRMCYLTIKEMATISE R L F L R R 0 1 1 1 0 2 0 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1220.6149 Q9UBF2 Q9UBF2 76 85 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00069588 136.96 By MS/MS 5.5 1.71 1 1 1 1 1 1 6 9660500 9660500 0 8321 2748 8607 20649;20650;20651;20652;20653;20654 14530;14531 14531 2 352750 0 LFQTAITR PGNDDSPLAVHLYCRLFQTAITRAKEKRQQ AVHLYCRLFQTAITRAKEKRQQVEALYRLQ R L F T R A 1 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 8 0 948.53927 Q9Y399 Q9Y399 252 259 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0080529 126.24 By MS/MS By matching 8.75 0.829 2 1 1 3 1 12101000 12047000 53876 8322 2920 8608 20655;20656;20657;20658 14532;14533 14532 2 982870 459630 LFQVLAPR RMADFWLTEKDLIPKLFQVLAPRYKDQTGG EKDLIPKLFQVLAPRYKDQTGGYTRMLQIP K L F P R Y 1 1 0 0 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 8 0 942.56509 Q9NRX2 Q9NRX2 89 96 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.0008173 175.75 By MS/MS 9 0 1 1 2398000 2398000 0 8323 2614 8609 20659 14534 14534 1 1376200 0 LFSADPFDLEAQAK EQQQDRARREQERIRLFSADPFDLEAQAKI RLFSADPFDLEAQAKIEEDIRQQNIEENMT R L F A K I 3 0 0 2 0 1 1 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 14 0 1550.7617 Q5TDH0 Q5TDH0 192 205 DDI2 Protein DDI1 homolog 2 yes yes 2 2.2444E-05 157.97 By MS/MS 7 0.816 1 1 1 3 3425000 3425000 0 8324 1639 8610 20660;20661;20662 14535;14536 14536 2 36543 0 LFSASEFEDPLVGEDTER YCHYVAGLVGIGLSRLFSASEFEDPLVGED ASEFEDPLVGEDTERANSMGLFLQKTNIIR R L F E R A 1 1 0 2 0 0 4 1 0 0 2 0 0 2 1 2 1 0 0 1 0 0 18 0 2039.9324 P37268 P37268 186 203 FDFT1 Squalene synthase yes yes 2 2.3119E-14 190.85 By MS/MS 7 0.816 1 1 1 3 6046500 6046500 0 8325 814 8611 20663;20664;20665 14537;14538 14537 2 102720 0 LFSCANCDTILTNR ______________________________ RLFSCANCDTILTNRSELISTRFTGATGRA R L F N R S 1 1 2 1 2 0 0 0 0 1 2 0 0 1 0 1 2 0 0 0 0 0 14 0 1683.7709 P62699 P62699 14 27 YPEL5 Protein yippee-like 5 yes yes 2 1.0945E-25 240.8 By MS/MS 10 0 1 1 633480 633480 0 8326 1139 8612 20666 14539 14539 1 673320 0 LFSDEAANIYER SSKLLAEKGDMNNAKLFSDEAANIYERAIS NAKLFSDEAANIYERAISTLLKKNMLLYFA K L F E R A 2 1 1 1 0 0 2 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 12 0 1426.6729 Q12996 Q12996 319 330 CSTF3 Cleavage stimulation factor subunit 3 yes yes 2 0.00029318 148.28 By MS/MS 5 0 1 1 843800 843800 0 8327 1323 8613 20667 14540 14540 1 34684 0 LFSELPLAK EVTRPTNSKSMKVVKLFSELPLAKKKETYD SMKVVKLFSELPLAKKKETYDWYPNHHTYA K L F A K K 1 0 0 0 0 0 1 0 0 0 3 1 0 1 1 1 0 0 0 0 0 0 9 0 1016.5906 Q9Y291 Q9Y291 36 44 MRPS33 28S ribosomal protein S33, mitochondrial yes yes 2 0.026353 93.143 By MS/MS 10 0 1 1 3295100 3295100 0 8328 2879 8614 20668 14541 14541 1 3502300 0 LFSEYHEK EVDADQVILSHSPMKLFSEYHEKRMLVSGQ LSHSPMKLFSEYHEKRMLVSGQGPVMENAQ K L F E K R 0 0 0 0 0 0 2 0 1 0 1 1 0 1 0 1 0 0 1 0 0 0 8 0 1051.4975 Q9BXW7 Q9BXW7 125 132 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 0.0039179 143.12 By MS/MS 7.5 0.5 1 1 2 4485500 4485500 0 8329 2404 8615 20669;20670 14542 14542 1 83504 0 LFSGATMASSR LDGLYRVAREEGLRRLFSGATMASSRGALV GLRRLFSGATMASSRGALVTVGQLSCYDQA R L F S R G 2 1 0 0 0 0 0 1 0 0 1 0 1 1 0 3 1 0 0 0 0 0 11 0 1126.5441 Q9UBX3 Q9UBX3 160 170 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 3.1418E-07 187.5 By MS/MS 5.57 3.74 2 1 2 1 1 7 15492000 15492000 0 8330 2761 8616;8617 20671;20672;20673;20674;20675;20676;20677 14543;14544;14545;14546;14547;14548 14545 1612 6 1284400 0 LFSGLSVSSEGPSQR IVFDAGFFRVESPVKLFSGLSVSSEGPSQR LFSGLSVSSEGPSQRLGTPKSVNKAVSQSR K L F Q R L 0 1 0 0 0 1 1 2 0 0 2 0 0 1 1 5 0 0 0 1 0 0 15 0 1549.7736 Q15398 Q15398 622 636 DLGAP5 Disks large-associated protein 5 yes yes 2 0.04237 96.067 By MS/MS 4 0 1 1 389380 389380 0 8331 1499 8618 20678 14549 14549 0 10630 0 LFSGSQVR VVGLEIHAQISSNSKLFSGSQVRFSAPPNS QISSNSKLFSGSQVRFSAPPNSLVSFFDAS K L F V R F 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 8 0 892.47667 O75879 O75879 81 88 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 0.024035 101.54 By MS/MS 6.5 0.5 1 1 2 8457400 8457400 0 8332 333 8619 20679;20680 14550 14550 1 69265 0 LFSLELVDESGEIR KSQIRTWSNSRGEGKLFSLELVDESGEIRA KLFSLELVDESGEIRATAFNEQVDKFFPLI K L F I R A 0 1 0 1 0 0 3 1 0 1 3 0 0 1 0 2 0 0 0 1 0 0 14 0 1605.825 P27694 P27694 221 234 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 1.6887E-12 209.8 By MS/MS 5 0 1 1 429870 429870 0 8333 708 8620 20681 14551 14551 1 17669 0 LFSQGIGGEQAQAK NISTLKKTLESDCTKLFSQGIGGEQAQAKF KLFSQGIGGEQAQAKFDSCLSDLAAVSNKF K L F A K F 2 0 0 0 0 3 1 3 0 1 1 1 0 1 0 1 0 0 0 0 0 0 14 0 1432.731 Q9H9E3 Q9H9E3 572 585 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 2.3649E-12 207.95 By MS/MS 5 0 1 1 1043100 1043100 0 8334 2534 8621 20682 14552 14552 1 42874 0 LFSQGQDVSNK SSGAPENLTFKERQRLFSQGQDVSNKVKAS ERQRLFSQGQDVSNKVKASRKLTELENELN R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 P55196 P55196 1797 1807 MLLT4 Afadin yes yes 2 0.010698 97.734 By MS/MS 2 0 1 1 114000 114000 0 8335 1029 8622 20683 14553 14553 1 5666.3 0 LFSVPSVFTPAVDTK PMRDHTLKEVAFYNRLFSVPSVFTPAVDTK LFSVPSVFTPAVDTKAPEKASIHRLMEAFI R L F T K A 1 0 0 1 0 0 0 0 0 0 1 1 0 2 2 2 2 0 0 3 0 0 15 0 1606.8607 Q2VPK5 Q2VPK5 321 335 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 yes yes 2 0.003538 109.72 By MS/MS 6 0 1 1 794890 794890 0 8336 1564 8623 20684 14554 14554 1 6198.6 0 LFTAESLIGLK KKGVQLQTHPNVDKKLFTAESLIGLKNPEK VDKKLFTAESLIGLKNPEKSFPVNSDVGVL K L F L K N 1 0 0 0 0 0 1 1 0 1 3 1 0 1 0 1 1 0 0 0 0 0 11 0 1190.6911 P48444 P48444 337 347 ARCN1 Coatomer subunit delta yes yes 2 6.8223E-22 234.81 By MS/MS 6 0 1 1 6934200 6934200 0 8337 903 8624 20685 14555 14555 1 54073 0 LFTAESLIGLKNPEK KKGVQLQTHPNVDKKLFTAESLIGLKNPEK LFTAESLIGLKNPEKSFPVNSDVGVLKWRL K L F E K S 1 0 1 0 0 0 2 1 0 1 3 2 0 1 1 1 1 0 0 0 0 0 15 1 1658.9243 P48444 P48444 337 351 ARCN1 Coatomer subunit delta yes yes 2;3 1.5605E-37 262.15 By MS/MS 6 0 2 2 20111000 20111000 0 8338 903 8625 20686;20687 14556;14557 14557 2 156830 0 LFTESCSISPK VAYKFHMGLYGETGRLFTESCSISPKLRSI ETGRLFTESCSISPKLRSIAVYYDNPHMVP R L F P K L 0 0 0 0 1 0 1 0 0 1 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1267.6118 Q9Y6I9 Q9Y6I9 63 73 TEX264 Testis-expressed sequence 264 protein yes yes 2 3.3681E-05 171.85 By MS/MS 7 0 1 1 12330000 12330000 0 8339 3007 8626 20688 14558 14558 1 220340 0 LFTIGGVQK GQGWAAAATSALLLRLFTIGGVQKEVFSLA SALLLRLFTIGGVQKEVFSLAGPVVSMAGH R L F Q K E 0 0 0 0 0 1 0 2 0 1 1 1 0 1 0 0 1 0 0 1 0 0 9 0 961.55967 O75717 O75717 556 564 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.041527 84.568 By MS/MS 3.5 0.5 1 1 2 1037300 1037300 0 8340 325 8627 20689;20690 14559 14559 1 27322 0 LFTLTALR QLVATGAVRDWDDPRLFTLTALRRRGFPPE RDWDDPRLFTLTALRRRGFPPEAINNFCAR R L F L R R 1 1 0 0 0 0 0 0 0 0 3 0 0 1 0 0 2 0 0 0 0 0 8 0 933.56475 P47897 P47897 516 523 QARS Glutamine--tRNA ligase yes yes 2 0.0030754 149.4 By MS/MS 5 0 1 1 661480 661480 0 8341 896 8628 20691 14560 14560 1 27189 0 LFTTMELMR DKKLEEIPKYKDLLKLFTTMELMRWSTLVE YKDLLKLFTTMELMRWSTLVEDYGMELRKG K L F M R W 0 1 0 0 0 0 1 0 0 0 2 0 2 1 0 0 2 0 0 0 0 0 9 0 1140.5671 O00232 O00232 308 316 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.002708 122.19 By MS/MS By MS/MS 6 0 3 2 1 3377500 3317500 60010 8342 81 8629;8630 20692;20693;20694 14561;14562 14562 46;47 2 25870 184050 LFVALGPIAGPEEK TEMIPLCNHPASFVKLFVALGPIAGPEEKK KLFVALGPIAGPEEKKQLKSTMLLMSEDLT K L F E K K 2 0 0 0 0 0 2 2 0 1 2 1 0 1 2 0 0 0 0 1 0 0 14 0 1439.8024 Q53R41 Q53R41 309 322 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.0037732 130.94 By MS/MS 4 0.816 1 1 1 3 1877000 1877000 0 8343 1590 8631 20695;20696;20697 14563 14563 1 75585 0 LFVDTDADTR LAFYSQEVRDLFQMKLFVDTDADTRLSRRV LFQMKLFVDTDADTRLSRRVLRDISERGRD K L F T R L 1 1 0 3 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 1 0 0 10 0 1151.5459 Q9BZX2 Q9BZX2 153 162 UCK2 Uridine-cytidine kinase 2 yes yes 2 7.6838E-05 168.26 By MS/MS 8 0 1 1 4753500 4753500 0 8344 2428 8632 20698 14564 14564 1 313590 0 LFVGNLPADITEDEFK LLRRPGEKTYTQRCRLFVGNLPADITEDEF FVGNLPADITEDEFKRLFAKYGEPGEVFIN R L F F K R 1 0 1 2 0 0 2 1 0 1 2 1 0 2 1 0 1 0 0 1 0 0 16 0 1806.904 P23246 P23246 299 314 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.00093331 134.61 By MS/MS 4 0 1 1 492730 492730 0 8345 665 8633 20699 14565;14566 14565 2 13451 0 LFVGSIPK SGKHIGVCISVANNRLFVGSIPKSKTKEQI ISVANNRLFVGSIPKSKTKEQILEEFSKVT R L F P K S 0 0 0 0 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 8 0 859.51674 O43390;O60506 O60506 245 252 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 0.04858 91.9 By MS/MS 5 0 1 1 658510 658510 0 8346 196;252 8634 20700 14567 14567 1 27067 0 LFVIDALYSDNISK SLATLPFLSTVVTDKLFVIDALYSDNISKE KLFVIDALYSDNISKENCVFRSSLIGIVCG K L F S K E 1 0 1 2 0 0 0 0 0 2 2 1 0 1 0 2 0 0 1 1 0 0 14 0 1596.8399 Q8IUX1 Q8IUX1 124 137 TMEM126B Complex I assembly factor TMEM126B, mitochondrial yes yes 2 0.0052612 102.87 By MS/MS 9 0 1 1 47139 47139 0 8347 1855 8635 20701 14568 14568 1 27053 0 LFVMLLFETFDK L F D K 0 0 0 1 0 0 1 0 0 0 3 1 1 3 0 0 1 0 0 1 0 0 12 0 1501.7891 REV__P20930 yes no 2 0.0126 87.639 By MS/MS 4 0 1 1 287240 287240 0 + + 8348 3017 8636 20702 14569 14569 1738 1 7841.2 0 LFVNAQR VTGAGRGHAGRIIHKLFVNAQRAAAMTPPE HAGRIIHKLFVNAQRAAAMTPPEEELKRMG K L F Q R A 1 1 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 846.47119 Q15042 Q15042 897 903 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 0.013907 143.18 By MS/MS 3 0 1 1 1007100 1007100 0 8349 1469 8637 20703 14570 14570 1 26291 0 LFVQDLATR ETVAKELQTLHNLRKLFVQDLATRVKKSAE LHNLRKLFVQDLATRVKKSAEIDSDDTGGS K L F T R V 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 9 0 1061.5869 P33176 P33176 802 810 KIF5B Kinesin-1 heavy chain yes yes 2 0.0024022 125.48 By MS/MS By matching 4 0 2 1 1 2679600 2662000 17577 8350 767 8638 20704;20705 14571 14571 1 72670 36728 LFVSDGVPGCLPVLAAAGR ______________________________ DGVPGCLPVLAAAGRARGRAEVLISTVGPE R L F G R A 3 1 0 1 1 0 0 3 0 0 3 0 0 1 2 1 0 0 0 3 0 0 19 0 1898.0084 P56192 P56192 3 21 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 6.6394E-06 138.24 By MS/MS 4 0 1 1 418080 418080 0 8351 1042 8639 20706 14572 14572 1 11413 0 LFVTNDAATILR GPNGMNKMVINHLEKLFVTNDAATILRELE LEKLFVTNDAATILRELEVQHPAAKMIVMA K L F L R E 2 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 2 0 0 1 0 0 12 0 1332.7402 P50990 P50990 63 74 CCT8 T-complex protein 1 subunit theta yes yes 2 7.7157E-60 298.7 By MS/MS By MS/MS 5.64 2.74 1 1 1 1 3 1 1 1 1 10 1 26282000 26240000 42544 8352 955 8640 20707;20708;20709;20710;20711;20712;20713;20714;20715;20716;20717 14573;14574;14575;14576;14577;14578;14579;14580;14581;14582;14583 14579 11 4363300 130480 LFVVPADEAQAR AALRDNHTHSDIQVKLFVVPADEAQARIPY QVKLFVVPADEAQARIPYARVNHNKYMVTE K L F A R I 3 1 0 1 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 12 0 1314.6932 Q8IV08 Q8IV08 397 408 PLD3 Phospholipase D3 yes yes 2 0.01748 88.681 By MS/MS 5 0 1 1 2166000 2166000 0 8353 1856 8641 20718 14584 14584 1 89032 0 LFVYDPNNPPSSEVLR SSGDIWVGCHPNGQKLFVYDPNNPPSSEVL FVYDPNNPPSSEVLRIQNILSEKPTVTTVY K L F L R I 0 1 2 1 0 0 1 0 0 0 2 0 0 1 3 2 0 0 1 2 0 0 16 0 1845.9261 Q15165 Q15165 290 305 PON2 Serum paraoxonase/arylesterase 2 yes yes 2 0.00044516 152 By MS/MS 7 0 1 1 1287900 1287900 0 8354 1484 8642 20719 14585 14585 1 23016 0 LFYADHPFIFLVR FDQDIYGREELRSPKLFYADHPFIFLVRDT PKLFYADHPFIFLVRDTQSGSLLFIGRLVR K L F V R D 1 1 0 1 0 0 0 0 1 1 2 0 0 3 1 0 0 0 1 1 0 0 13 0 1636.8766 P50454 P50454 381 393 SERPINH1 Serpin H1 yes yes 3 0.0089467 100.69 By MS/MS 6 0 1 1 922720 922720 0 8355 947 8643 20720 14586 14586 1 7195.4 0 LFYHIVDSDEVSTK EPAFYTCVEVTAGNRLFYHIVDSDEVSTKI RLFYHIVDSDEVSTKILMEFNKMNLPGEVT R L F T K I 0 0 0 2 0 0 1 0 1 1 1 1 0 1 0 2 1 0 1 2 0 0 14 0 1651.8094 Q9UQE7 Q9UQE7 558 571 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2;3 0.00014065 142.89 By MS/MS 3.33 0.471 2 1 3 1850800 1850800 0 8356 2860 8644 20721;20722;20723 14587;14588 14588 2 48501 0 LGAAQSPFNDLNR PPGGPGPRQQQAGARLGAAQSPFNDLNRQL ARLGAAQSPFNDLNRQLVNMGFPQWHLGNH R L G N R Q 2 1 2 1 0 1 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 13 0 1401.7001 Q96D05 Q96D05 57 69 C10orf35 Uncharacterized protein C10orf35 yes yes 2 3.0518E-05 165.63 By MS/MS 10 0 1 1 1233400 1233400 0 8357 2145 8645 20724 14589 14589 1 1311000 0 LGAASLGAEDPETQVVLINAVK QSSVATITRLADVVKLGAASLGAEDPETQV AEDPETQVVLINAVKDVAKALGDLISATKA K L G V K D 4 0 1 1 0 1 2 2 0 1 3 1 0 0 1 1 1 0 0 3 0 0 22 0 2194.1845 Q9Y490 Q9Y490 2064 2085 TLN1 Talin-1 yes yes 2;3 2.5054E-05 146 By MS/MS 2.75 0.829 2 1 1 4 612480 612480 0 8358 2947 8646 20725;20726;20727;20728 14590;14591;14592 14591 3 21970 0 LGAAVAPEGNQK LVAPMWNGRIRGIHRLGAAVAPEGNQKKKR IHRLGAAVAPEGNQKKKRTILQFLTNYFYD R L G Q K K 3 0 1 0 0 1 1 2 0 0 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1153.6091 Q9NW81 Q9NW81 25 36 ATP5SL ATP synthase subunit s-like protein yes yes 2 0.027416 81.338 By MS/MS 9 0.816 1 1 1 3 2044200 2044200 0 8359 2665 8647 20729;20730;20731 14593 14593 1 345240 0 LGADYGLDAR KKVLDKFYKRKEIQKLGADYGLDARLFHQA KEIQKLGADYGLDARLFHQAFISFRNYIMQ K L G A R L 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1049.5142 Q8IYB8 Q8IYB8 109 118 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00090215 127.4 By MS/MS 5 0 1 1 2227700 2227700 0 8360 1879 8648 20732 14594 14594 1 91566 0 LGAFFLER SHEKLPVRTETAMPRLGAFFLERSAGAETD TETAMPRLGAFFLERSAGAETDNAVPQGSK R L G E R S 1 1 0 0 0 0 1 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 8 0 951.5178 Q9BRX5 Q9BRX5 43 50 GINS3 DNA replication complex GINS protein PSF3 yes yes 2 0.0084907 124.08 By MS/MS 8 0 1 1 533800 533800 0 8361 2332 8649 20733 14595 14595 1 35215 0 LGAFQAQEK GAVYSHRPNQHNTVKLGAFQAQEKELVFDI QHNTVKLGAFQAQEKELVFDIDMTDYDDVR K L G E K E 2 0 0 0 0 2 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 990.51345 P49642 P49642 96 104 PRIM1 DNA primase small subunit yes yes 2 0.010364 104.01 By MS/MS 6 0 1 1 3319100 3319100 0 8362 923 8650 20734 14596 14596 1 25883 0 LGALPPDIGTLGSLR ICQLPLRVLIVSNNKLGALPPDIGTLGSLR LGALPPDIGTLGSLRQLDVSSNELQSLPSE K L G L R Q 1 1 0 1 0 0 0 3 0 1 4 0 0 0 2 1 1 0 0 0 0 0 15 0 1478.8457 O75427 O75427 148 162 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.048369 67.385 By MS/MS 5 0 1 1 178820 178820 0 8363 308 8651 20735 14597 14597 1 7350.3 0 LGALQGDPEALTLYR ATLLTTWLTELYLSRLGALQGDPEALTLYR LGALQGDPEALTLYRETKECFRTFLSSPRH R L G Y R E 2 1 0 1 0 1 1 2 0 0 4 0 0 0 1 0 1 0 1 0 0 0 15 0 1615.857 Q9P253 Q9P253 503 517 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 4.9359E-21 229.56 By MS/MS 3.5 0.5 1 1 2 1106000 1106000 0 8364 2734 8652 20736;20737 14598 14598 1 30095 0 LGANSLLDLVVFGR ACGEAACASVHGANRLGANSLLDLVVFGRA RLGANSLLDLVVFGRACALSIEESCRPGDK R L G G R A 1 1 1 1 0 0 0 2 0 0 4 0 0 1 0 1 0 0 0 2 0 0 14 0 1472.8351 P31040 P31040 452 465 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 5.2289E-08 185.3 By MS/MS 6 0 1 1 421570 421570 0 8365 749 8653 20738 14599 14599 1 3287.4 0 LGAQALLGAAK DGGVKMGLPRRLAVRLGAQALLGAAKMLLH LAVRLGAQALLGAAKMLLHSEQHPGQLKDN R L G A K M 4 0 0 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1011.6077 P32322 P32322 205 215 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2 1.0847E-12 214.29 By MS/MS 8.5 0.5 1 1 2 88947000 88947000 0 8366 764 8654 20739;20740 14600 14600 1 5989500 0 LGASALDSIQEFR IGPTLLLNSDIIRARLGASALDSIQEFRLS ARLGASALDSIQEFRLSGWLAQQEDAHRIV R L G F R L 2 1 0 1 0 1 1 1 0 1 2 0 0 1 0 2 0 0 0 0 0 0 13 0 1405.7201 Q8IY17 Q8IY17 825 837 PNPLA6 Neuropathy target esterase yes yes 2 3.878E-25 234.9 By MS/MS 3.5 0.5 1 1 2 2382200 2382200 0 8367 1876 8655 20741;20742 14601;14602 14601 2 62594 0 LGASLAFNNIYR KRLYSLALHPNAFKRLGASLAFNNIYREFR FKRLGASLAFNNIYREFREEESLVEQFVFE R L G Y R E 2 1 2 0 0 0 0 1 0 1 2 0 0 1 0 1 0 0 1 0 0 0 12 0 1337.7092 P78527 P78527 1076 1087 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.5172E-11 209.21 By MS/MS 2 0.816 1 1 1 3 512690 512690 0 8368 1197 8656 20743;20744;20745 14603;14604 14604 2 22982 0 LGAVGGSGFK VYKCGDCPSADPTVKLGAVGGSGFKVCLRT DPTVKLGAVGGSGFKVCLRTPHLEKRYKIQ K L G F K V 1 0 0 0 0 0 0 4 0 0 1 1 0 1 0 1 0 0 0 1 0 0 10 0 891.48142 O95163 O95163 465 474 IKBKAP Elongator complex protein 1 yes yes 2 0.033809 82.75 By MS/MS 2 0.816 1 1 1 3 886110 886110 0 8369 368 8657 20746;20747;20748 14605 14605 1 32046 0 LGAVYDVSHYNALLK ERTEFAHRIWDTLQKLGAVYDVSHYNALLK LGAVYDVSHYNALLKVYLQNEYKFSPTDFL K L G L K V 2 0 1 1 0 0 0 1 1 0 3 1 0 0 0 1 0 0 2 2 0 0 15 0 1661.8777 P42704 P42704 156 170 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.1333E-38 262.07 By MS/MS 3.5 0.5 1 1 2 2268600 2268600 0 8370 854 8658 20749;20750 14606 14606 1 59310 0 LGCCVIDVDDDILEK PGAGKTTVGRIIGQKLGCCVIDVDDDILEK LGCCVIDVDDDILEKTWNMSVSEKLQDVGN K L G E K T 0 0 0 4 2 0 1 1 0 2 2 1 0 0 0 0 0 0 0 2 0 0 15 0 1762.8117 Q8IYQ7 Q8IYQ7 79 93 THNSL1 Threonine synthase-like 1 yes yes 2 2.1182E-07 169.89 By MS/MS 5 0 1 1 658960 658960 0 8371 1882 8659 20751 14607 14607 1 27086 0 LGCQDAFPEVYDK WEMFDGSLYHKLREKLGCQDAFPEVYDKIC EKLGCQDAFPEVYDKICKAARH________ K L G D K I 1 0 0 2 1 1 1 1 0 0 1 1 0 1 1 0 0 0 1 1 0 0 13 0 1540.6868 Q15392 Q15392 497 509 DHCR24 Delta(24)-sterol reductase yes yes 2 1.5095E-07 182.71 By MS/MS 2 0.816 1 1 1 3 2803900 2803900 0 8372 1497 8660 20752;20753;20754 14608;14609 14608 2 127010 0 LGDASIAAPFTSK QVLRDLEDESTPIVKLGDASIAAPFTSKLS VKLGDASIAAPFTSKLSSIQCICHVIKQGR K L G S K L 3 0 0 1 0 0 0 1 0 1 1 1 0 1 1 2 1 0 0 0 0 0 13 0 1276.6663 Q9HD20 Q9HD20 951 963 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 1.6634E-07 181.4 By MS/MS 2 0.816 1 1 1 3 1576100 1576100 0 8373 2566 8661 20755;20756;20757 14610;14611 14610 2 66980 0 LGDDIDLIVR KNEIASVAYRYRRWKLGDDIDLIVRCEHDG YRRWKLGDDIDLIVRCEHDGVMTGANGEVS K L G V R C 0 1 0 3 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1127.6186 O15371 O15371 365 374 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 1.0115E-06 182.76 By MS/MS By MS/MS 6.6 1.36 1 2 1 1 4 1 17325000 17274000 51179 8374 172 8662 20758;20759;20760;20761;20762 14612;14613;14614;14615;14616 14615 5 286930 156960 LGDFGLAR IKSSNVLLDERLTPKLGDFGLARFSRFAGS DERLTPKLGDFGLARFSRFAGSSPSQSSMV K L G A R F 1 1 0 1 0 0 0 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 847.4552 P51617;P51955 P51617 356 363 IRAK1;NEK2 Interleukin-1 receptor-associated kinase 1;Serine/threonine-protein kinase Nek2 yes no 2 0.002028 157.21 By MS/MS 5 0 1 1 750840 750840 0 8375 971 8663 20763 14617 14617 1 30862 0 LGDGLFLQCCR GRKKVTAVHKANIMKLGDGLFLQCCREVAA NIMKLGDGLFLQCCREVAARYPQITFENMI K L G C R E 0 1 0 1 2 1 0 2 0 0 3 0 0 1 0 0 0 0 0 0 0 0 11 0 1337.622 P51553 P51553 227 237 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 2 0.00024669 153.05 By MS/MS 7.5 0.5 1 1 2 18232000 18232000 0 8376 966 8664 20764;20765 14618 14618 1 351850 0 LGDHQSPATPAFK YSAFLPDGCDHLRDKLGDHQSPATPAFKSL DKLGDHQSPATPAFKSLEAFFLYGRLYEFW K L G F K S 2 0 0 1 0 1 0 1 1 0 1 1 0 1 2 1 1 0 0 0 0 0 13 0 1367.6834 Q8TEQ6 Q8TEQ6 1262 1274 GEMIN5 Gem-associated protein 5 yes yes 3 0.034969 67.118 By MS/MS 3 0 1 1 465220 465220 0 8377 2003 8665 20766 14619 14619 1 12145 0 LGDKHATLQK AVRNQRKLLASLVKRLGDKHATLQKSTKEV SLVKRLGDKHATLQKSTKEVRSSIRQVSDV R L G Q K S 1 0 0 1 0 1 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 10 1 1109.6193 Q13263 Q13263 263 272 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 0.00087509 163.16 By MS/MS By matching 4.6 0.8 3 1 1 4 1 3766300 3746500 19755 8378 1351 8666 20767;20768;20769;20770;20771 14620;14621 14620 2 100070 41279 LGDLGAIDEK IQEKKSGRIPGIYGRLGDLGAIDEKYDVAI GIYGRLGDLGAIDEKYDVAISSCCHALDYI R L G E K Y 1 0 0 2 0 0 1 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1029.5342 Q9NTJ3 Q9NTJ3 619 628 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0063222 109.42 By MS/MS 3 0 1 1 0 0 0 8379 2630 8667 20772 14622 14622 1 0 0 LGDLGLGR IKPANVFITATGVVKLGDLGLGRFFSSKTT TATGVVKLGDLGLGRFFSSKTTAAHSLVGT K L G G R F 0 1 0 1 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 799.4552 Q8TDX7;Q9HC98 Q8TDX7 177 184 NEK7;NEK6 Serine/threonine-protein kinase Nek7;Serine/threonine-protein kinase Nek6 yes no 2 0.0083526 124.59 By MS/MS 7.5 0.5 1 1 2 2635600 2635600 0 8380 2000 8668 20773;20774 14623 14623 1 117500 0 LGDLLISQFSGPSAEQMCK QALCPGSTRNFVIHRLGDLLISQFSGPSAE LISQFSGPSAEQMCKTYSEFCSRHSKALKL R L G C K T 1 0 0 1 1 2 1 2 0 1 3 1 1 1 1 3 0 0 0 0 0 0 19 0 2079.9969 Q92974 Q92974 318 336 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 2.6276E-19 196.37 By MS/MS 4 0 1 1 630360 630360 0 8381 2094 8669 20775 14624 14624 1368 1 17208 0 LGDQPSIGLAQTLEK RGMIVIGLETHPAGRLGDQPSIGLAQTLEK LGDQPSIGLAQTLEKLGFVVGRLKTGTPPR R L G E K L 1 0 0 1 0 2 1 2 0 1 3 1 0 0 1 1 1 0 0 0 0 0 15 0 1568.841 Q9Y2Z2 Q9Y2Z2 213 227 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 4.5557E-38 283.05 By MS/MS 5 0 1 1 2901000 2901000 0 8382 2908 8670 20776 14625 14625 1 119240 0 LGDSQLVK CLTYLDNGVVFVGSRLGDSQLVKLNVDSNE VVFVGSRLGDSQLVKLNVDSNEQGSYVVAM R L G V K L 0 0 0 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 858.48108 Q16531 Q16531 328 335 DDB1 DNA damage-binding protein 1 yes yes 2 0.0041329 141.52 By MS/MS 2.5 1.12 1 1 1 1 4 2178800 2178800 0 8383 1537 8671 20777;20778;20779;20780 14626;14627;14628 14628 3 71000 0 LGDSSLSR LEIEERERRREEERRLGDSSLSRKDSRWGD RREEERRLGDSSLSRKDSRWGDRDSEGTWR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0012859 168.23 By MS/MS 3 1.41 1 1 1 1 1 5 14456000 14456000 0 8384 1409 8672 20781;20782;20783;20784;20785 14629;14630;14631 14630 3 404670 0 LGDSSLSRK LEIEERERRREEERRLGDSSLSRKDSRWGD REEERRLGDSSLSRKDSRWGDRDSEGTWRK R L G R K D 0 1 0 1 0 0 0 1 0 0 2 1 0 0 0 3 0 0 0 0 0 0 9 1 961.51926 Q14152 Q14152 878 886 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.039788 104.2 By MS/MS 3 0 1 1 213150 213150 0 8385 1409 8673 20786 14632 14632 1 5564.4 0 LGDTPGVSYSDIAAR KDVSDEDVARAINQKLGDTPGVSYSDIAAR LGDTPGVSYSDIAARAYGCGRTELAIKLLE K L G A R A 2 1 0 2 0 0 0 2 0 1 1 0 0 0 1 2 1 0 1 1 0 0 15 0 1520.7471 Q9H269 Q9H269 511 525 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 2.9411E-07 167.2 By MS/MS By matching 4.75 0.829 2 1 1 3 1 7386600 7347500 39188 8386 2472 8674 20787;20788;20789;20790 14633 14633 1 129690 81886 LGDTYPSISNAR KILQKSPLPPGNVKKLGDTYPSISNARNAE VKKLGDTYPSISNARNAELRLRWGQIVLKN K L G A R N 1 1 1 1 0 0 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1292.6361 Q9H4A4 Q9H4A4 556 567 RNPEP Aminopeptidase B yes yes 2 0.023854 82.417 By MS/MS 5 0 1 1 714610 714610 0 8387 2497 8675 20791 14634 14634 1 29373 0 LGDVGMAELCPGLLHPSSR ASKASLRELALGSNKLGDVGMAELCPGLLH GMAELCPGLLHPSSRLRTLWIWECGITAKG K L G S R L 1 1 0 1 1 0 1 3 1 0 4 0 1 0 2 2 0 0 0 1 0 0 19 0 2007.987 P13489 P13489 239 257 RNH1 Ribonuclease inhibitor yes yes 3 0.0045042 81.01 By MS/MS 7.5 0.5 1 1 2 3200000 3200000 0 8388 574 8676 20792;20793 14635;14636 14636 361 2 66147 0 LGDVISIQPCPDVK KIRMNRVVRNNLRVRLGDVISIQPCPDVKY RLGDVISIQPCPDVKYGKRIHVLPIDDTVE R L G V K Y 0 0 0 2 1 1 0 1 0 2 1 1 0 0 2 1 0 0 0 2 0 0 14 0 1539.7967 P55072 P55072 96 109 VCP Transitional endoplasmic reticulum ATPase yes yes 2 9.6627E-07 176.05 By MS/MS By MS/MS 5.36 2.77 1 1 1 2 1 1 1 1 1 1 10 1 29526000 29409000 117490 8389 1026 8677 20794;20795;20796;20797;20798;20799;20800;20801;20802;20803;20804 14637;14638;14639;14640;14641 14639 5 1367400 245510 LGDVYVNDAFGTAHR AEPAKIEAFRASLSKLGDVYVNDAFGTAHR LGDVYVNDAFGTAHRAHSSMVGVNLPQKAG K L G H R A 2 1 1 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 1 2 0 0 15 0 1633.7849 P00558;P07205 P00558 157 171 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 2;3 1.6673E-14 206.74 By MS/MS 7.33 0.471 2 1 3 12098000 12098000 0 8390 432 8678 20805;20806;20807 14642;14643 14643 2 232720 0 LGEAAVR EEAPAPGIKSEVRKKLGEAAVRAAKAVNYV IKSEVRKKLGEAAVRAAKAVNYVGAGTVEF K L G V R A 2 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 714.40244 Q96RQ3 Q96RQ3 302 308 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 0.023329 119.57 By MS/MS 5.5 1.12 1 1 1 1 4 3549800 3549800 0 8391 2249 8679 20808;20809;20810;20811 14644 14644 1 85562 0 LGEASDSELADADK PRPRPTRTSLLRRARLGEASDSELADADKA RLGEASDSELADADKASVASEVSTTSSTSK R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 Q5SW79 Q5SW79 1108 1121 CEP170 Centrosomal protein of 170 kDa yes yes 2 5.3264E-26 246.56 By MS/MS 2 0 1 1 659540 659540 0 8392 1621 8680 20812 14645 14645 1 32782 0 LGEHNIDVLEGNEQFINAAK VVSAAHCYKSRIQVRLGEHNIDVLEGNEQF IDVLEGNEQFINAAKIITHPNFNGNTLDND R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 2;3;4 4.7422E-62 328.73 By MS/MS By MS/MS 5.33 2.87 6 7 11 7 7 6 5 6 7 7 41 28 4240800000 3237300000 1003400000 + 8393 33 8681 20813;20814;20815;20816;20817;20818;20819;20820;20821;20822;20823;20824;20825;20826;20827;20828;20829;20830;20831;20832;20833;20834;20835;20836;20837;20838;20839;20840;20841;20842;20843;20844;20845;20846;20847;20848;20849;20850;20851;20852;20853;20854;20855;20856;20857;20858;20859;20860;20861;20862;20863;20864;20865;20866;20867;20868;20869;20870;20871;20872;20873;20874;20875;20876;20877;20878;20879;20880;20881 14646;14647;14648;14649;14650;14651;14652;14653;14654;14655;14656;14657;14658;14659;14660;14661;14662;14663;14664;14665;14666;14667;14668;14669;14670;14671;14672;14673;14674;14675;14676;14677;14678;14679;14680;14681;14682;14683;14684;14685;14686;14687;14688;14689;14690;14691;14692;14693;14694;14695;14696;14697;14698;14699;14700;14701;14702;14703;14704;14705;14706;14707;14708;14709;14710;14711;14712;14713;14714;14715;14716;14717;14718;14719;14720;14721;14722;14723;14724;14725;14726;14727;14728;14729;14730;14731;14732;14733;14734;14735;14736;14737;14738;14739;14740;14741;14742;14743;14744;14745;14746;14747;14748;14749;14750;14751;14752;14753;14754;14755;14756;14757;14758;14759 14731 112 295950000 8685200000 LGEHNIEVLEGNEQFINAAK VVSAGHCYKSRIQVRLGEHNIEVLEGNEQF IEVLEGNEQFINAAKIIRHPQYDRKTLNND R L G A K I 2 0 3 0 0 1 4 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2224.1124 CON__P07477;P07477;Q8NHM4;P07478 CON__P07477 73 92 PRSS1;PRSS3P2;PRSS2 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2;Putative trypsin-6;Trypsin-2 yes no 3 0.00011054 134.33 By MS/MS By MS/MS 5.22 2.9 1 2 2 1 1 1 1 6 3 26727000 24756000 1971000 + 8394 46 8682 20882;20883;20884;20885;20886;20887;20888;20889;20890 14760;14761;14762;14763 14763 4 3522200 2434800 LGEINVIGEPFLNVNCEHIK ENVGIDITEPLYMQRLGEINVIGEPFLNVN VIGEPFLNVNCEHIKSFDKNLYRQLISYPQ R L G I K S 0 0 3 0 1 0 3 2 1 3 2 1 0 1 1 0 0 0 0 2 0 0 20 0 2294.1729 P33991 P33991 197 216 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.0010507 106.57 By MS/MS 4 0 1 1 576940 576940 0 8395 773 8683 20891 14764 14764 1 15750 0 LGELELQLK LAYMNRAYHAILQGRLGELELQLKHGKEEP AILQGRLGELELQLKHGKEEPEEVQYKKST R L G L K H 0 0 0 0 0 1 2 1 0 0 4 1 0 0 0 0 0 0 0 0 0 0 9 0 1041.607 Q5VW36 Q5VW36 909 917 FOCAD Focadhesin yes yes 2 0.0023314 126.24 By MS/MS 3 0 1 1 536710 536710 0 8396 1654 8684 20892 14765 14765 1 14011 0 LGELILTSESSR VRQKIAITHKNKINRLGELILTSESSRYQF INRLGELILTSESSRYQFRNLADCLQKIRD R L G S R Y 0 1 0 0 0 0 2 1 0 1 3 0 0 0 0 3 1 0 0 0 0 0 12 0 1303.6983 Q14197 Q14197 130 141 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 3.3643E-05 169.58 By MS/MS By matching 9.33 0.471 2 1 2 1 8018300 7915900 102420 8397 1419 8685 20893;20894;20895 14766 14766 1 4614600 1103800 LGELPSWILMR PAPVPVKDKKLLEVKLGELPSWILMRDFSP LEVKLGELPSWILMRDFSPSGIFGAFQRGY K L G M R D 0 1 0 0 0 0 1 1 0 1 3 0 1 0 1 1 0 1 0 0 0 0 11 0 1313.7166 P56134 P56134 23 33 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.0010593 126.31 By MS/MS 10 0 1 1 211130 211130 0 8398 1041 8686 20896 14767 14767 810 1 224410 0 LGELTGTVK IESETVRTSEVLRKKLGELTGTVKESLHEV EVLRKKLGELTGTVKESLHEVSKSDLGRKI K L G V K E 0 0 0 0 0 0 1 2 0 0 2 1 0 0 0 0 2 0 0 1 0 0 9 0 916.52295 O43615 O43615 122 130 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00021473 163.15 By MS/MS 8 0.816 1 1 1 3 16106000 16106000 0 8399 209 8687 20897;20898;20899 14768 14768 1 353900 0 LGENIIPYVADGAK VHALNILRALFRDTRLGENIIPYVADGAKA RLGENIIPYVADGAKAAILGFTSPVWAVRN R L G A K A 2 0 1 1 0 0 1 2 0 2 1 1 0 0 1 0 0 0 1 1 0 0 14 0 1458.7718 Q6YHU6 Q6YHU6 1223 1236 THADA Thyroid adenoma-associated protein yes yes 2 0.0027637 136.96 By MS/MS 2.5 0.5 1 1 2 527140 527140 0 8400 1737 8688 20900;20901 14769 14769 1 19026 0 LGENMILKR REGSLKDQLALAIGKLGENMILKRAAWVKV ALAIGKLGENMILKRAAWVKVPSGFYVGSY K L G K R A 0 1 1 0 0 0 1 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 9 1 1072.6063 P43897 P43897 193 201 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.047622 99.136 By MS/MS 8 0 1 1 1177800 1177800 0 8401 868 8689 20902 14770 14770 1 77696 0 LGEPDYIPSQQDILLAR QLGESVKYFLDNLDKLGEPDYIPSQQDILL EPDYIPSQQDILLARRPTKGIHEYDFEIKN K L G A R R 1 1 0 2 0 2 1 1 0 2 3 0 0 0 2 1 0 0 1 0 0 0 17 0 1927.0051 Q14344 Q14344 184 200 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes yes 2 0.021636 85.973 By MS/MS 7 0 1 1 340300 340300 0 8402 1430 8690 20903 14771 14771 1 6081.3 0 LGEQCEAVVR NSALMELDKGLRSGKLGEQCEAVVRFPRLF LRSGKLGEQCEAVVRFPRLFQKYPFPILIN K L G V R F 1 1 0 0 1 1 2 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1159.5656 Q9NVH2 Q9NVH2 38 47 INTS7 Integrator complex subunit 7 yes yes 2 0.0047005 108.43 By MS/MS 4 0 1 1 456660 456660 0 8403 2652 8691 20904 14772 14772 1 12466 0 LGEQEGKR KIVQVALNGLENILRLGEQEGKRSGSGVNP GLENILRLGEQEGKRSGSGVNPYCGLIEEA R L G K R S 0 1 0 0 0 1 2 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 915.47739 O60684 O60684 451 458 KPNA6 Importin subunit alpha-7 yes yes 2 0.0168 139.97 By MS/MS 6 0 1 1 3423900 3423900 0 8404 258 8692 20905 14773 14773 1 26700 0 LGEQVFGTTGK LLICSKETGCMVYEKLGEQVFGTTGKFVIF VYEKLGEQVFGTTGKFVIFGATSLQNTGAM K L G G K F 0 0 0 0 0 1 1 3 0 0 1 1 0 1 0 0 2 0 0 1 0 0 11 0 1135.5873 Q9H2H9 Q9H2H9 137 147 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes yes 2 0.040534 79.23 By MS/MS 2 0 1 1 306370 306370 0 8405 2478 8693 20906 14774 14774 1 15228 0 LGESANAAK ELKVGIPVTDENGNRLGESANAAKQAITQV DENGNRLGESANAAKQAITQVVVSRILMAA R L G A K Q 3 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 859.43995 Q9H9B4 Q9H9B4 215 223 SFXN1 Sideroflexin-1 yes yes 2 1.0469E-05 176.44 By MS/MS By matching 8.33 0.471 2 1 2 1 30745000 30661000 83609 8406 2533 8694 20907;20908;20909 14775;14776 14775 2 2267200 713290 LGESVQDLSSFDEYSSELK DDEDISEDIKFLLEKLGESVQDLSSFDEYS VQDLSSFDEYSSELKSGRLEWSPVHKSEKF K L G L K S 0 0 0 2 0 1 3 1 0 0 3 1 0 1 0 5 0 0 1 1 0 0 19 0 2131.9797 Q9UI12 Q9UI12 342 360 ATP6V1H V-type proton ATPase subunit H yes yes 2 3.7291E-15 192.4 By MS/MS 6 0 1 1 2349100 2349100 0 8407 2786 8695 20910 14777 14777 1 18318 0 LGETDEEKLFVETGK STCQRFVEKYTELQKLGETDEEKLFVETGK LGETDEEKLFVETGKALLAEGVILRRVGEA K L G G K A 0 0 0 1 0 0 4 2 0 0 2 2 0 1 0 0 2 0 0 1 0 0 15 1 1693.841 Q9Y3D9 Q9Y3D9 109 123 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2;3 1.1928E-27 240.37 By MS/MS By matching 9.25 0.433 3 1 3 1 23947000 23896000 50797 8408 2935 8696 20911;20912;20913;20914 14778;14779 14779 2 13784000 547440 LGETYKDHENIVIAK PWCGHCKQLAPIWDKLGETYKDHENIVIAK LGETYKDHENIVIAKMDSTANEVEAVKVHS K L G A K M 1 0 1 1 0 0 2 1 1 2 1 2 0 0 0 0 1 0 1 1 0 0 15 1 1728.9046 P07237 P07237 410 424 P4HB Protein disulfide-isomerase yes yes 3 0.0055835 92.151 By MS/MS 6 0 1 1 0 0 0 8409 487 8697 20915 14780 14780 1 0 0 LGEVALLQGNHQIVEMCYQR LEAAKALDDKNCWEKLGEVALLQGNHQIVE LLQGNHQIVEMCYQRTKNFDKLSFLYLITG K L G Q R T 1 1 1 0 1 3 2 2 1 1 3 0 1 0 0 0 0 0 1 2 0 0 20 0 2357.162 P53621 P53621 677 696 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.020665 61.757 By MS/MS 3 0 1 1 975770 975770 0 8410 1005 8698 20916 14781 14781 781 1 25473 0 LGEWDLPEAVQR QSKRTVNIRTRDNRRLGEWDLPEAVQRLVE NRRLGEWDLPEAVQRLVELQNTRVPNAEEI R L G Q R L 1 1 0 1 0 1 2 1 0 0 2 0 0 0 1 0 0 1 0 1 0 0 12 0 1411.7096 Q9BW92 Q9BW92 691 702 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.00046789 140.07 By MS/MS 7 2 1 1 1 1 1 1 1 7 12313000 12313000 0 8411 2391 8699 20917;20918;20919;20920;20921;20922;20923 14782;14783;14784;14785;14786 14784 5 572900 0 LGEWVGLCK AEHQINLIKVDDNKKLGEWVGLCKIDREGK VDDNKKLGEWVGLCKIDREGKPRKVVGCSC K L G C K I 0 0 0 0 1 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 9 0 1060.5376 P25398 P25398 85 93 RPS12 40S ribosomal protein S12 yes yes 2 0.0010958 139.97 By MS/MS By matching 10 0 2 1 1 5405300 5348600 56677 8412 684 8700 20924;20925 14787 14787 1 5685000 1453700 LGEYGFQNALIVR EPQNLIKQNCDQFEKLGEYGFQNALIVRYT EKLGEYGFQNALIVRYTRKVPQVSTPTLVE K L G V R Y 1 1 1 0 0 1 1 2 0 1 2 0 0 1 0 0 0 0 1 1 0 0 13 0 1478.7882 CON__P02769 CON__P02769 421 433 yes yes 2 0.00030475 155.15 By MS/MS By MS/MS 7.75 1.79 2 1 1 3 1 4720800 4663800 57045 + 8413 43 8701 20926;20927;20928;20929 14788;14789;14790;14791 14790 4 127890 174950 LGFAGLVQEISFGTTK GGRIVPRFSELTAEKLGFAGLVQEISFGTT GFAGLVQEISFGTTKDKMLVIEQCKNSRAV K L G T K D 1 0 0 0 0 1 1 3 0 1 2 1 0 2 0 1 2 0 0 1 0 0 16 0 1666.893 P48643 P48643 353 368 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 3.4153E-63 292.39 By MS/MS 6 0 2 2 31344000 31344000 0 8414 909 8702 20930;20931 14792;14793;14794 14792 3 244420 0 LGFDKENVYDELR YTEEEDRFLICMLHKLGFDKENVYDELRQC HKLGFDKENVYDELRQCIRNSPQFRFDWFL K L G L R Q 0 1 1 2 0 0 2 1 0 0 2 1 0 1 0 0 0 0 1 1 0 0 13 1 1596.7784 O60264 O60264 962 974 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2;3 0.0018447 103.43 By MS/MS 3 0 2 2 2008700 2008700 0 8415 240 8703 20932;20933 14795;14796 14796 1 52437 0 LGFEDGSVLK GTIGLIHAVANNQDKLGFEDGSVLKQFLSE NNQDKLGFEDGSVLKQFLSETEKMSPEDRA K L G L K Q 0 0 0 1 0 0 1 2 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1063.555 P09936 P09936 106 115 UCHL1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 2 0.0046676 146.23 By MS/MS 9 0 1 1 0 0 0 8416 523 8704 20934 14797 14797 1 0 0 LGFEGGQTPFYIR GRGHKGERQRGTRPRLGFEGGQTPFYIRIP PRLGFEGGQTPFYIRIPKYGFNEGHSFRRQ R L G I R I 0 1 0 0 0 1 1 3 0 1 1 0 0 2 1 0 1 0 1 0 0 0 13 0 1483.746 Q9P015 Q9P015 65 77 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 1.9347E-36 270.61 By MS/MS 8 0 1 1 2961500 2961500 0 8417 2721 8705 20935 14798;14799 14799 2 195370 0 LGFEIVGYGCSICVGNTAPLSDAVLNAVKQGDLVTCGILSGNK THYLSSSGVLPYLSKLGFEIVGYGCSICVG KQGDLVTCGILSGNKNFEGRLCDCVRANYL K L G N K N 3 0 3 2 3 1 1 7 0 3 5 2 0 1 1 3 2 0 1 5 0 0 43 1 4466.2284 P48200 P48200 569 611 IREB2 Iron-responsive element-binding protein 2 yes yes 6 0.047043 6.5456 By MS/MS 2 0 1 1 17670 0 17670 8418 902 8706 20936 14800 14800 1 0 14877 LGFITNNSSK GAPEALRALRARGKRLGFITNNSSKTRAAY ARGKRLGFITNNSSKTRAAYAEKLRRLGFG R L G S K T 0 0 2 0 0 0 0 1 0 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1079.5611 A6NDG6 A6NDG6 63 72 PGP Phosphoglycolate phosphatase yes yes 2 0.0030977 122.94 By MS/MS 8 0 1 1 2361400 2361400 0 8419 20 8707 20937 14801 14801 1 155780 0 LGFLHSGTAK SVPSQKTYQGSYGFRLGFLHSGTAKSVTCT SYGFRLGFLHSGTAKSVTCTYSPALNKMFC R L G A K S 1 0 0 0 0 0 0 2 1 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1029.5607 P04637 P04637 111 120 TP53 Cellular tumor antigen p53 yes yes 3 0.049074 79.489 By MS/MS 6.5 0.5 1 1 2 3054700 3054700 0 8420 455 8708 20938;20939 14802 14802 1 26111 0 LGFLVAK NINPVSMDICKQEEKLGFLVAKQDLVISLL DICKQEEKLGFLVAKQDLVISLLPYVLHPL K L G A K Q 1 0 0 0 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 7 0 746.46906 Q9UDR5 Q9UDR5 540 546 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.018381 130.84 By MS/MS 4 0 1 1 449660 449660 0 8421 2762 8709 20940 14803 14803 1 12275 0 LGFMSAFVK RARHKEAFLKKHNLKLGFMSAFVKASAFAL KKHNLKLGFMSAFVKASAFALQEQPVVNAV K L G V K A 1 0 0 0 0 0 0 1 0 0 1 1 1 2 0 1 0 0 0 1 0 0 9 0 998.52592 P36957 P36957 278 286 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.015967 104.06 By MS/MS 6 0 1 1 1633500 1633500 0 8422 812 8710 20941 14804 14804 1 12738 0 LGFSEYCR NEDINQESAPKASLRLGFSEYCRISNLIVL APKASLRLGFSEYCRISNLIVLHLRKVEEE R L G C R I 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 8 0 1030.4542 Q14566 Q14566 715 722 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.006069 133.12 By MS/MS 4 0 1 1 5094700 5094700 0 8423 1436 8711 20942 14805 14805 1 139080 0 LGFTGSTPIGK GIAGQRLSEHPDIRKLGFTGSTPIGKQIMK DIRKLGFTGSTPIGKQIMKSCAVSNLKKVS K L G G K Q 0 0 0 0 0 0 0 3 0 1 1 1 0 1 1 1 2 0 0 0 0 0 11 0 1076.5866 Q3SY69 Q3SY69 667 677 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 3.7345E-06 176.38 By MS/MS 4 0 1 1 2285300 2285300 0 8424 1570 8712 20943 14806 14806 1 62385 0 LGFVVGR LGDQPSIGLAQTLEKLGFVVGRLKTGTPPR GLAQTLEKLGFVVGRLKTGTPPRIAKESIN K L G G R L 0 1 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 2 0 0 7 0 746.44391 Q9Y2Z2 Q9Y2Z2 228 234 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.043799 105.42 By MS/MS 5 0 1 1 583200 583200 0 8425 2908 8713 20944 14807 14807 1 23972 0 LGGAVLSFSEATSSVQK VSTRTSSSFAAAMARLGGAVLSFSEATSSV GAVLSFSEATSSVQKGESLADSVQTMSCYA R L G Q K G 2 0 0 0 0 1 1 2 0 0 2 1 0 1 0 4 1 0 0 2 0 0 17 0 1679.873 P27708 P27708 1987 2003 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 6.5237E-25 219.43 By MS/MS 2 0.816 1 1 1 3 1190700 1190700 0 8426 709 8714 20945;20946;20947 14808;14809 14809 2 49856 0 LGGDEGTSQTSFETSNR YQMTGEAWKLSSGHKLGGDEGTSQTSFETS GDEGTSQTSFETSNREAAKSQNLPKPLTEF K L G N R E 0 1 1 1 0 1 2 3 0 0 1 0 0 1 0 3 3 0 0 0 0 0 17 0 1784.7813 O00124 O00124 134 150 UBXN8 UBX domain-containing protein 8 yes yes 2 6.9045E-14 187.74 By MS/MS 8 0 1 1 2110500 2110500 0 8427 68 8715 20948 14810 14810 1 139230 0 LGGEVSCLVAGTK SLAPITLNTITAATRLGGEVSCLVAGTKCD TRLGGEVSCLVAGTKCDKVAQDLCKVAGIA R L G T K C 1 0 0 0 1 0 1 3 0 0 2 1 0 0 0 1 1 0 0 2 0 0 13 0 1289.6649 P13804 P13804 47 59 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 1.9597E-05 169.65 By MS/MS 8 0 1 1 5945600 5945600 0 8428 582 8716 20949 14811 14811 1 392230 0 LGGIGQFLAK RTPLHEIALSIKLLRLGGIGQFLAKAIEPP IKLLRLGGIGQFLAKAIEPPPLDAVIEAEH R L G A K A 1 0 0 0 0 1 0 3 0 1 2 1 0 1 0 0 0 0 0 0 0 0 10 0 1002.5862 Q08211 Q08211 810 819 DHX9 ATP-dependent RNA helicase A yes yes 2 4.9207E-05 171.38 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 2880000 2880000 0 8429 1287 8717 20950;20951;20952;20953;20954;20955 14812;14813 14813 2 78881 0 LGGIPVGVVAVETR IMQPWAQTVVVGRARLGGIPVGVVAVETRT RLGGIPVGVVAVETRTVELSIPADPANLDS R L G T R T 1 1 0 0 0 0 1 3 0 1 1 0 0 0 1 0 1 0 0 4 0 0 14 0 1365.798 Q13085 Q13085 1978 1991 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 0.014153 88.155 By MS/MS 1 0 1 1 324750 324750 0 8430 1332 8718 20956 14814 14814 1 15867 0 LGGLDVLEAEFSK KMVKGKVAEIMQNDRLGGLDVLEAEFSKTW DRLGGLDVLEAEFSKTWEFKNHNVAVYSIQ R L G S K T 1 0 0 1 0 0 2 2 0 0 3 1 0 1 0 1 0 0 0 1 0 0 13 0 1376.7187 Q5SGD2 Q5SGD2 72 84 PPM1L Protein phosphatase 1L yes yes 2 0.0018444 120.96 By MS/MS 7.5 0.5 1 1 2 176210 176210 0 8431 1616 8719 20957;20958 14815;14816;14817 14817 3 7016.3 0 LGGLGAR ______________________________ ______________________________ R L G A R A 1 1 0 0 0 0 0 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 642.38131 Q99797 Q99797 7 13 MIPEP Mitochondrial intermediate peptidase yes yes 2 0.031642 113.82 By MS/MS 6 1.41 1 1 1 1 1 5 9081800 9081800 0 8432 2291 8720 20959;20960;20961;20962;20963 14818 14818 1 144150 0 LGGNEIVSFLK EVPISFVDRVYGESKLGGNEIVSFLKGLLT GESKLGGNEIVSFLKGLLTLFATT______ K L G L K G 0 0 1 0 0 0 1 2 0 1 2 1 0 1 0 1 0 0 0 1 0 0 11 0 1175.655 O60762 O60762 241 251 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 7.6252E-07 182.16 By MS/MS 5.78 3.12 1 1 1 1 1 2 1 1 9 61477000 61477000 0 8433 263 8721 20964;20965;20966;20967;20968;20969;20970;20971;20972 14819;14820;14821;14822;14823 14820 5 4322400 0 LGGPEAGLGEYLFER KLIKKMGDHLTNLHRLGGPEAGLGEYLFER LGGPEAGLGEYLFERLTLKHD_________ R L G E R L 1 1 0 0 0 0 3 4 0 0 3 0 0 1 1 0 0 0 1 0 0 0 15 0 1606.7991 P02792 P02792 155 169 FTL Ferritin light chain yes yes 2 0.00014853 134.99 By MS/MS 9 0 1 1 293190 293190 0 8434 438 8722 20973 14824 14824 1 168270 0 LGGSLADSYLDEGFLLDK LKGSGNLEAIHIIKKLGGSLADSYLDEGFL SLADSYLDEGFLLDKKIGVNQPKRIENAKI K L G D K K 1 0 0 3 0 0 1 3 0 0 5 1 0 1 0 2 0 0 1 0 0 0 18 0 1911.9466 P78371 P78371 205 222 CCT2 T-complex protein 1 subunit beta yes yes 2 2.3053E-25 224.43 By MS/MS 6 0 3 3 45066000 45066000 0 8435 1195 8723 20974;20975;20976 14825;14826;14827 14825 3 351430 0 LGGSLADSYLDEGFLLDKK LKGSGNLEAIHIIKKLGGSLADSYLDEGFL LADSYLDEGFLLDKKIGVNQPKRIENAKIL K L G K K I 1 0 0 3 0 0 1 3 0 0 5 2 0 1 0 2 0 0 1 0 0 0 19 1 2040.0415 P78371 P78371 205 223 CCT2 T-complex protein 1 subunit beta yes yes 2;3 1.3123E-18 198.48 By MS/MS 6 0 3 3 304400000 304400000 0 8436 1195 8724 20977;20978;20979 14828;14829;14830 14829 3 2373800 0 LGGSPFGPAGTGK TDRCYLTMTQALEARLGGSPFGPAGTGKTE ARLGGSPFGPAGTGKTESVKALGHQLGRFV R L G G K T 1 0 0 0 0 0 0 5 0 0 1 1 0 1 2 1 1 0 0 0 0 0 13 0 1144.5877 Q14204 Q14204 1900 1912 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00092852 132.25 By MS/MS 1.5 0.5 1 1 2 2350700 2350700 0 8437 1421 8725 20980;20981 14831 14831 1 115270 0 LGGTIDDCELVEGLVLTQK TATSVDLRDIKIVKKLGGTIDDCELVEGLV IDDCELVEGLVLTQKVSNSGITRVEKAKIG K L G Q K V 0 0 0 2 1 1 2 3 0 1 4 1 0 0 0 0 2 0 0 2 0 0 19 0 2059.0507 P50991 P50991 214 232 CCT4 T-complex protein 1 subunit delta yes yes 2;3 6.4102E-99 333.44 By MS/MS 6.5 0.764 4 1 1 6 173600000 173600000 0 8438 956 8726 20982;20983;20984;20985;20986;20987 14832;14833;14834;14835;14836;14837;14838;14839 14833 8 1360700 0 LGGVSSTEELDIR KAAVEDSGTTVETIKLGGVSSTEELDIRTL IKLGGVSSTEELDIRTLQTKNRKLAEMLDQ K L G I R T 0 1 0 1 0 0 2 2 0 1 2 0 0 0 0 2 1 0 0 1 0 0 13 0 1374.6991 Q5VTR2 Q5VTR2 37 49 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.0060835 100.55 By MS/MS 4 0 1 1 1334700 1334700 0 8439 1649 8727 20988 14840 14840 1 36437 0 LGGYLAEEQATPENPTIR VANSLAKLSVHALSRLGGYLAEEQATPENP YLAEEQATPENPTIRKSLAGMLTPYVARKL R L G I R K 2 1 1 0 0 1 3 2 0 1 2 0 0 0 2 0 2 0 1 0 0 0 18 0 1957.9745 O75165 O75165 1589 1606 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.6426E-18 241.51 By MS/MS 2 0 1 1 422480 422480 0 8440 287 8728 20989 14841 14841 1 20999 0 LGHAETDEQLQNIISK ASQDELNQLERVFLRLGHAETDEQLQNIIS GHAETDEQLQNIISKFLPPVLLKLSSTQEG R L G S K F 1 0 1 1 0 2 2 1 1 2 2 1 0 0 0 1 1 0 0 0 0 0 16 0 1794.9112 Q5VYK3 Q5VYK3 23 38 ECM29 Proteasome-associated protein ECM29 homolog yes yes 3 0.0042596 97.767 By MS/MS 3.5 0.5 1 1 2 2851000 2851000 0 8441 1657 8729 20990;20991 14842 14842 1 74920 0 LGHEEQQK EALLGVQEDVDEYVKLGHEEQQKRLQAIIK DVDEYVKLGHEEQQKRLQAIIKKIDLDSDG K L G Q K R 0 0 0 0 0 2 2 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 967.47231 Q14257 Q14257 57 64 RCN2 Reticulocalbin-2 yes yes 2 0.0025878 143.11 By MS/MS 6.5 0.5 1 1 2 2675300 2675300 0 8442 1426 8730 20992;20993 14843 14843 1 21582 0 LGHEEQQKR EALLGVQEDVDEYVKLGHEEQQKRLQAIIK VDEYVKLGHEEQQKRLQAIIKKIDLDSDGF K L G K R L 0 1 0 0 0 2 2 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1123.5734 Q14257 Q14257 57 65 RCN2 Reticulocalbin-2 yes yes 2;3 0.0044608 131.06 By MS/MS By matching 7.67 1.49 4 2 2 2 2 10 2 18035000 17999000 35285 8443 1426 8731 20994;20995;20996;20997;20998;20999;21000;21001;21002;21003;21004;21005 14844;14845;14846;14847;14848;14849 14848 6 365630 108220 LGHPDTLNQGEFK NIETIINTFHQYSVKLGHPDTLNQGEFKEL VKLGHPDTLNQGEFKELVRKDLQNFLKKEN K L G F K E 0 0 1 1 0 1 1 2 1 0 2 1 0 1 1 0 1 0 0 0 0 0 13 0 1454.7154 P06702 P06702 26 38 S100A9 Protein S100-A9 yes yes 3 0.0092974 96.334 By MS/MS 7.5 0.5 1 1 2 135130 0 135130 8444 480 8732 21006;21007 14850 14850 1 0 1075600 LGHVVMGNNAVSPYQQVIEK NLIRNARLDAKIDSKLGHVVMGNNAVSPYQ MGNNAVSPYQQVIEKTKSLSFRSQMLAMNI K L G E K T 1 0 2 0 0 2 1 2 1 1 1 1 1 0 1 1 0 0 1 4 0 0 20 0 2182.1205 P60228 P60228 388 407 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 3 0.00062344 102.79 By MS/MS 7 0.816 1 1 1 3 8653900 8653900 0 8445 1065 8733 21008;21009;21010 14851;14852 14851 828 2 107290 0 LGIEKTDPTTLTDEEINR GVRRFSDIQIRRLKRLGIEKTDPTTLTDEE EKTDPTTLTDEEINRFARLDIDPETITWQR R L G N R F 0 1 1 2 0 0 3 1 0 2 2 1 0 0 1 0 4 0 0 0 0 0 18 1 2044.0324 P11586 P11586 500 517 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 7.477E-07 181.75 By MS/MS 4 0 2 2 9466400 9466400 0 8446 556 8734 21011;21012 14853;14854 14854 2 258420 0 LGIGQLTAQEVK THTTVIHQLDKALAKLGIGQLTAQEVKSAC LAKLGIGQLTAQEVKSACYLRGLNSTHIGE K L G V K S 1 0 0 0 0 2 1 2 0 1 2 1 0 0 0 0 1 0 0 1 0 0 12 0 1255.7136 Q6P1Q0 Q6P1Q0 293 304 LETMD1 LETM1 domain-containing protein 1 yes yes 2 6.4499E-11 201.09 By MS/MS 8.5 0.5 1 1 2 4261000 4261000 0 8447 1703 8735 21013;21014 14855;14856 14855 2 773530 0 LGIHEDSQNR ENYKKFYEQFSKNIKLGIHEDSQNRKKLSE SKNIKLGIHEDSQNRKKLSELLRYYTSASG K L G N R K 0 1 1 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1167.5632 P07900 P07900 447 456 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 0.0015449 128.86 By MS/MS By matching 4.5 0.866 1 3 3 1 6 2 34407000 34335000 72810 8448 494 8736 21015;21016;21017;21018;21019;21020;21021;21022 14857;14858;14859 14858 3 922790 182220 LGIHEDSTNR ENYKKFYEAFSKNLKLGIHEDSTNRRRLSE SKNLKLGIHEDSTNRRRLSELLRYHTSQSG K L G N R R 0 1 1 1 0 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1140.5523 P08238 P08238 439 448 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 0.00050264 126.31 By MS/MS By matching 4.54 1.74 1 1 1 3 3 2 2 11 2 61167000 61117000 49698 8449 501 8737 21023;21024;21025;21026;21027;21028;21029;21030;21031;21032;21033;21034;21035 14860;14861;14862;14863;14864;14865;14866;14867 14867 8 1979300 126910 LGINKTDPSTLTEEEVSK GVREFSEIQLARLKKLGINKTDPSTLTEEE NKTDPSTLTEEEVSKFARLDIDPSTITWQR K L G S K F 0 0 1 1 0 0 3 1 0 1 2 2 0 0 1 2 3 0 0 1 0 0 18 1 1960.0001 Q6UB35 Q6UB35 543 560 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 6.2953E-08 166.9 By MS/MS 5 0.816 1 1 1 3 11739000 11739000 0 8450 1726 8738 21036;21037;21038 14868;14869 14868 2 315570 0 LGINLLGGPLGGK CNKCGQLGVGNYKKRLGINLLGGPLGGKQV KRLGINLLGGPLGGKQVIRVSCGDEFTIAA R L G G K Q 0 0 1 0 0 0 0 5 0 1 4 1 0 0 1 0 0 0 0 0 0 0 13 0 1207.7289 Q8TD19 Q8TD19 638 650 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.00015474 151.83 By MS/MS 4 0 1 1 205040 205040 0 8451 1999 8739 21039 14870 14870 1 5597.3 0 LGIPDAVSYIK FFRQNGYLEFDALSRLGIPDAVSYIKKRYK ALSRLGIPDAVSYIKKRYKTTQLLFLKAAC R L G I K K 1 0 0 1 0 0 0 1 0 2 1 1 0 0 1 1 0 0 1 1 0 0 11 0 1174.6598 O94874 O94874 275 285 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.024435 85.355 By MS/MS 5.5 1.12 1 1 1 1 4 3738700 3738700 0 8452 354 8740 21040;21041;21042;21043 14871 14871 1 122360 0 LGIPQNTILVQTLLR MQYKYLLFSLHAIVKLGIPQNTILVQTLLR LGIPQNTILVQTLLRVTQERINECDEICLS K L G L R V 0 1 1 0 0 2 0 1 0 2 4 0 0 0 1 0 2 0 0 1 0 0 15 0 1678.0141 Q9NYY8 Q9NYY8 242 256 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.00061307 126.5 By MS/MS 6 0 1 1 1406900 1406900 0 8453 2701 8741 21044 14872 14872 1 10971 0 LGIQLDFEK EIAKKRLEFENQKTRLGIQLDFEKNQLKED ENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ R L G E K N 0 0 0 1 0 1 1 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1061.5757 Q14683 Q14683 817 825 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.002198 127.68 By MS/MS 3 0 1 1 573330 573330 0 8454 1440 8742 21045 14873 14873 1 14967 0 LGISSLIR LFTGSEDLDNVFVTRLGISSLIREAMSAYN DNVFVTRLGISSLIREAMSAYNSHEEGRLV R L G I R E 0 1 0 0 0 0 0 1 0 2 2 0 0 0 0 2 0 0 0 0 0 0 8 0 857.53345 P35573 P35573 571 578 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0080258 125.81 By MS/MS 3 0 1 1 478900 478900 0 8455 792 8743 21046 14874 14874 1 12502 0 LGIYDADGDGDFDVDDAK VVWFDLVDYEEVLGKLGIYDADGDGDFDVD YDADGDGDFDVDDAKVLLGLKERSTSEPAV K L G A K V 2 0 0 7 0 0 0 3 0 1 1 1 0 1 0 0 0 0 1 1 0 0 18 0 1899.801 Q12797 Q12797 87 104 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 2.9973E-14 223.03 By MS/MS 4 0 1 1 514400 514400 0 8456 1307 8744 21047 14875 14875 1 14043 0 LGIYTVLFER LSAGLLRQATYTTTRLGIYTVLFERLTGAD YTTTRLGIYTVLFERLTGADGTPPGFLLKA R L G E R L 0 1 0 0 0 0 1 1 0 1 2 0 0 1 0 0 1 0 1 1 0 0 10 0 1209.6758 Q02978 Q02978 99 108 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.00076202 153.05 By MS/MS 8.5 0.5 1 1 2 2713500 2713500 0 8457 1260 8745 21048;21049 14876 14876 1 205530 0 LGKHDVTCTVSGGGR QDREQLMFPFHFVDRLGKHDVTCTVSGGGR LGKHDVTCTVSGGGRSAQAGAIRLAMAKAL R L G G R S 0 1 0 1 1 0 0 4 1 0 1 1 0 0 0 1 2 0 0 2 0 0 15 1 1542.7573 P82933 P82933 323 337 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2;3 9.0582E-05 159.66 By MS/MS 7 0 2 2 3769000 3769000 0 8458 1211 8746 21050;21051 14877;14878 14878 2 67353 0 LGLAPQIQDLYGK RCIYCIHALSLYLFKLGLAPQIQDLYGKVD FKLGLAPQIQDLYGKVDFTEEEINNMKTEL K L G G K V 1 0 0 1 0 2 0 2 0 1 3 1 0 0 1 0 0 0 1 0 0 0 13 0 1414.782 P46940 P46940 162 174 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.0017455 122.18 By MS/MS 2.5 0.5 1 1 2 313710 313710 0 8459 892 8747 21052;21053 14879 14879 1 9135.8 0 LGLDYEER LSRPNAQELPSMYQRLGLDYEERVLPSIVN LPSMYQRLGLDYEERVLPSIVNEVLKSVVA R L G E R V 0 1 0 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 8 0 993.47673 Q99623 Q99623 124 131 PHB2 Prohibitin-2 yes yes 2 0.012293 116.73 By MS/MS By matching 8.33 0.471 2 1 2 1 43783000 43135000 648180 8460 2277 8748 21054;21055;21056 14880 14880 1 3051900 5529800 LGLEALAANHQQLFTDGR ALETERVRANARALRLGLEALAANHQQLFT EALAANHQQLFTDGRSWGSFTVLDNSAWYQ R L G G R S 3 1 1 1 0 2 1 2 1 0 4 0 0 1 0 0 1 0 0 0 0 0 18 0 1953.0068 Q9Y2Z4 Q9Y2Z4 146 163 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 3 0.015308 85.362 By MS/MS 6.5 0.5 1 1 2 1438100 1438100 0 8461 2909 8749 21057;21058 14881 14881 1 16311 0 LGLEFFDQPAVPLAR YRSIYFSSPKGHLTRLGLEFFDQPAVPLAR LGLEFFDQPAVPLARAFLGQVLVRRLPNGT R L G A R A 2 1 0 1 0 1 1 1 0 0 3 0 0 2 2 0 0 0 0 1 0 0 15 0 1671.8984 P29372 P29372 86 100 MPG DNA-3-methyladenine glycosylase yes yes 2 0.014214 86.114 By MS/MS 8 0 1 1 119320 119320 0 8462 724 8750 21059 14882;14883 14882 2 7871.2 0 LGLELGK SGSSHQDLSQKIADRLGLELGKVVTKKFSN LSQKIADRLGLELGKVVTKKFSNQETCVEI R L G G K V 0 0 0 0 0 0 1 2 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 728.44324 P60891;P11908 P60891 23 29 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 2 0.021851 121.29 By MS/MS 8 0 1 1 3514800 3514800 0 8463 1076;559 8751 21060 14884 14884 1 231870 0 LGLENAEALIR CFGSEGGTYYIKEQKLGLENAEALIRLIED KEQKLGLENAEALIRLIEDGRGCEVIQEIK K L G I R L 2 1 1 0 0 0 2 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1197.6717 P10155 P10155 53 63 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 2 0.00057343 156.16 By MS/MS 6 0 1 1 4064400 4064400 0 8464 534 8752 21061 14885 14885 1 31694 0 LGLGEGAEEK SEGKAYSLGRAEYGRLGLGEGAEEKSIPTL AEYGRLGLGEGAEEKSIPTLISRLPAVSSV R L G E K S 1 0 0 0 0 0 3 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1001.5029 P18754 P18754 326 335 RCC1 Regulator of chromosome condensation yes yes 2 0.0032492 113.18 By MS/MS 5.5 1.12 1 1 1 1 4 54812000 54812000 0 8465 625 8753 21062;21063;21064;21065 14886 14886 1 520170 0 LGLGTAYIHGMK IYGSDRILLRPREKKLGLGTAYIHGMKHAT EKKLGLGTAYIHGMKHATGNYIIIMDADLS K L G M K H 1 0 0 0 0 0 0 3 1 1 2 1 1 0 0 0 1 0 1 0 0 0 12 0 1259.6696 O60762 O60762 96 107 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0005504 135.55 By MS/MS 8 0 1 1 2740400 2740400 0 8466 263 8754 21066 14887 14887 148 1 180780 0 LGLLALACSDGK WELPGTPRKAPLLPRLGLLALACSDGKVLL LPRLGLLALACSDGKVLLFSLPHPEALLAQ R L G G K V 2 0 0 1 1 0 0 2 0 0 4 1 0 0 0 1 0 0 0 0 0 0 12 0 1216.6486 Q8WUA4 Q8WUA4 496 507 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 2 0.00030485 147.73 By MS/MS 4 0 1 1 1308800 1308800 0 8467 2014 8755 21067 14888 14888 1 35730 0 LGLLGLPAPK SYVKQMERESREHLRLGLLGLPAPKNDFEI REHLRLGLLGLPAPKNDFEIVLPENAEKEL R L G P K N 1 0 0 0 0 0 0 2 0 0 4 1 0 0 2 0 0 0 0 0 0 0 10 0 977.62735 Q99459 Q99459 478 487 CDC5L Cell division cycle 5-like protein yes yes 2 0.00064447 139.31 By MS/MS 4.5 0.5 1 1 2 722230 722230 0 8468 2267 8756 21068;21069 14889 14889 1 20940 0 LGLPGDEVDNK RAPLKSVGPDFGKKRLGLPGDEVDNKVKGA GKKRLGLPGDEVDNKVKGAAGRTDLLRLRR R L G N K V 0 0 1 2 0 0 1 2 0 0 2 1 0 0 1 0 0 0 0 1 0 0 11 0 1155.5772 P78527 P78527 2705 2715 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00019038 162.64 By MS/MS 1.5 0.5 1 1 2 3115000 3115000 0 8469 1197 8757 21070;21071 14890;14891 14890 2 153200 0 LGLPGDEVDNKVK RAPLKSVGPDFGKKRLGLPGDEVDNKVKGA KRLGLPGDEVDNKVKGAAGRTDLLRLRRRF R L G V K G 0 0 1 2 0 0 1 2 0 0 2 2 0 0 1 0 0 0 0 2 0 0 13 1 1382.7405 P78527 P78527 2705 2717 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.009507 127.83 By MS/MS 2 0.816 1 1 1 3 2484500 2484500 0 8470 1197 8758 21072;21073;21074 14892;14893 14893 2 108750 0 LGLPLLLMPEEAR RTVGALPRGPRQNSRLGLPLLLMPEEARLL SRLGLPLLLMPEEARLLAEIGAVTLVSAPR R L G A R L 1 1 0 0 0 0 2 1 0 0 5 0 1 0 2 0 0 0 0 0 0 0 13 0 1450.8218 Q9BSV6 Q9BSV6 46 58 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 2 0.00059847 132.91 By MS/MS 7.5 0.5 1 1 2 591040 591040 0 8471 2342 8759 21075;21076 14894;14895;14896 14896 1466 3 35883 0 LGLQHLR QDMPNAMPVSELTDKLGLQHLRSRTWYVQA PVSELTDKLGLQHLRSRTWYVQATCATQGT K L G L R S 0 1 0 0 0 1 0 1 1 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 835.50282 P84085 P84085 143 149 ARF5 ADP-ribosylation factor 5 yes yes 2 0.017236 133.99 By MS/MS 9.5 0.5 1 1 2 531060 531060 0 8472 1215 8760 21077;21078 14897 14897 1 382330 0 LGLQLNSLGPEACK AGLRTLLPVFLRARKLGLQLNSLGPEACKD KLGLQLNSLGPEACKDLRDLLLHDQCQITT K L G C K D 1 0 1 0 1 1 1 2 0 0 4 1 0 0 1 1 0 0 0 0 0 0 14 0 1498.7814 Q86UT6 Q86UT6 755 768 NLRX1 NLR family member X1 yes yes 2 5.8648E-18 262.07 By MS/MS 4.5 0.5 1 1 2 982050 982050 0 8473 1825 8761 21079;21080 14898 14898 1 28584 0 LGLQSLR QDLPNAMAISEMTDKLGLQSLRNRTWYVQA AISEMTDKLGLQSLRNRTWYVQATCATQGT K L G L R N 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 785.47594 P18085 P18085 143 149 ARF4 ADP-ribosylation factor 4 yes yes 2 0.0011919 193.98 By MS/MS 9.67 0.471 1 2 3 11276000 11276000 0 8474 621 8762 21081;21082;21083 14899;14900 14899 2 8465400 0 LGLSESDENCR ESLGKCLLASTYLARLGLSESDENCRRFMD YLARLGLSESDENCRRFMDRCMPEAFKKLL R L G C R R 0 1 1 1 1 0 2 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1278.551 Q9UPU5 Q9UPU5 163 173 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0011594 131.52 By MS/MS 1.5 0.5 1 1 2 210420 210420 0 8475 2854 8763 21084;21085 14901 14901 1 10404 0 LGLTEDQFIR NLCYTTLLRPGTAQKLGLTEDQFIRTPTGD GTAQKLGLTEDQFIRTPTGDEFVKTSVRKG K L G I R T 0 1 0 1 0 1 1 1 0 1 2 0 0 1 0 0 1 0 0 0 0 0 10 0 1190.6295 P28340 P28340 630 639 POLD1 DNA polymerase delta catalytic subunit yes yes 2 6.5182E-05 183.43 By MS/MS 3.5 0.5 1 1 2 2456800 2456800 0 8476 719 8764 21086;21087 14902 14902 1 64226 0 LGLTEIR RKKRGGRRYRKMKERLGLTEIRKQANRMSF RYRKMKERLGLTEIRKQANRMSFGEIEEDA R L G I R K 0 1 0 0 0 0 1 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 7 0 800.4756 Q8WWY3 Q8WWY3 366 372 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 0.013964 143.02 By matching By MS/MS 6 0 2 1 1 1736100 1582100 154060 8477 2043 8765 21088;21089 14903 14903 1 12337 472500 LGLVGVNLTLDGVK NLVVKPDQLIKRRGKLGLVGVNLTLDGVKS KLGLVGVNLTLDGVKSWLKPRLGQEATVGK K L G V K S 0 0 1 1 0 0 0 3 0 0 4 1 0 0 0 0 1 0 0 3 0 0 14 0 1396.829 P53396 P53396 69 82 ACLY ATP-citrate synthase yes yes 2 4.5424E-12 202 By MS/MS 4 0 1 1 740520 740520 0 8478 1001 8766 21090 14904 14904 1 20215 0 LGMIVAEVVSAR GVKCRLDSSLPPVRRLGMIVAEVVSARIHP VRRLGMIVAEVVSARIHPEGPPLKFQYEED R L G A R I 2 1 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 3 0 0 12 0 1243.6958 Q9Y4R8 Q9Y4R8 405 416 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.00027173 143.4 By MS/MS 4 0 1 1 1248300 1248300 0 8479 2958 8767 21091 14905 14905 1707 1 34077 0 LGMLSPEGTCK INVLLKPNTSVQFLRLGMLSPEGTCKAFDT QFLRLGMLSPEGTCKAFDTAGNGYCRSEGV R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 P49327 P49327 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00010515 156.83 By MS/MS 2.29 1.03 2 2 2 1 7 12714000 12714000 0 8480 915 8768;8769 21092;21093;21094;21095;21096;21097;21098 14906;14907;14908;14909;14910 14907 658 5 582630 0 LGNDFHTNK VKKAARVIIEKYYTRLGNDFHTNKRVCEEI EKYYTRLGNDFHTNKRVCEEIAIIPSKKLR R L G N K R 0 0 2 1 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1044.4989 P08708 P08708 24 32 RPS17 40S ribosomal protein S17 yes yes 2 0.0041727 117.53 By MS/MS By matching 10 0 2 1 1 431400 404240 27169 8481 507 8770 21099;21100 14911 14911 1 429660 696860 LGNDFHTNKR VKKAARVIIEKYYTRLGNDFHTNKRVCEEI KYYTRLGNDFHTNKRVCEEIAIIPSKKLRN R L G K R V 0 1 2 1 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 10 1 1200.6 P08708 P08708 24 33 RPS17 40S ribosomal protein S17 yes yes 2 0.0024826 139.43 By MS/MS 10 0 1 1 290580 290580 0 8482 507 8771 21101 14912 14912 1 308850 0 LGNPIVPLNIR VPRDLPSWMKFLHGKLGNPIVPLNIRLFLA LHGKLGNPIVPLNIRLFLAKLVINTEEVFR K L G I R L 0 1 2 0 0 0 0 1 0 2 2 0 0 0 2 0 0 0 0 1 0 0 11 0 1204.7292 P78527 P78527 2133 2143 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00084001 135.79 By MS/MS 2.5 1.12 1 1 1 1 4 3314400 3314400 0 8483 1197 8772 21102;21103;21104;21105 14913;14914;14915 14914 3 152460 0 LGNQLAK ASCWNHDGDPVELLKLGNQLAKFRQCLQEN GDPVELLKLGNQLAKFRQCLQENPKFLQEK K L G A K F 1 0 1 0 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 742.43374 Q5JRX3 Q5JRX3 467 473 PITRM1 Presequence protease, mitochondrial yes yes 2 0.025579 118.01 By MS/MS 4 0 1 1 1287100 1287100 0 8484 1606 8773 21106 14916 14916 1 35135 0 LGNQNVETK IPSETLRGASVFQVKLGNQNVETKQLLSAS SVFQVKLGNQNVETKQLLSASYEFQREFTQ K L G T K Q 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1001.5142 Q8WWC4 Q8WWC4 250 258 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.00021214 163.32 By MS/MS 9.5 0.5 1 1 2 8824700 8824700 0 8485 2037 8774 21107;21108 14917 14917 1 5081900 0 LGNTISSLFGGGTTPDAK TLVEDSAEEESTLTKLGNTISSLFGGGTTP TISSLFGGGTTPDAKENGTDTVQEEEESPA K L G A K E 1 0 1 1 0 0 0 4 0 1 2 1 0 1 1 2 3 0 0 0 0 0 18 0 1734.8788 Q9Y4L1 Q9Y4L1 577 594 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.0039547 101.72 By MS/MS 3 0 1 1 177080 177080 0 8486 2955 8775 21109 14918 14918 1 4622.6 0 LGPAGTTILGNSK DLKLPPANWLRESAKLGPAGTTILGNSKKS AKLGPAGTTILGNSKKSKPFSSFGMAYDFI K L G S K K 1 0 1 0 0 0 0 3 0 1 2 1 0 0 1 1 2 0 0 0 0 0 13 0 1227.6823 Q3B7T1 Q3B7T1 87 99 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.00099601 131.42 By MS/MS 3.5 0.5 1 1 2 1038900 1038900 0 8487 1566 8776 21110;21111 14919 14919 1 27606 0 LGPALATGNVVVMK QIIPWNFPLLMQAWKLGPALATGNVVVMKV KLGPALATGNVVVMKVAEQTPLTALYVANL K L G M K V 2 0 1 0 0 0 0 2 0 0 2 1 1 0 1 0 1 0 0 3 0 0 14 0 1368.7799 P05091 P05091 196 209 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00070053 123.01 By MS/MS By matching 6.75 0.829 2 1 1 3 1 4153300 4115200 38134 8488 467 8777 21112;21113;21114;21115 14920 14920 255 1 82061 116950 LGPDDPNVAK VEYYYRRALEIYATRLGPDDPNVAKTKNNL IYATRLGPDDPNVAKTKNNLASCYLKQGKY R L G A K T 1 0 1 2 0 0 0 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 10 0 1024.5189 Q9H0B6;Q07866 Q9H0B6 358 367 KLC2;KLC1 Kinesin light chain 2;Kinesin light chain 1 no no 2 0.051799 78.556 By MS/MS 5 0 1 1 1588000 1588000 0 8489 2451;1284 8778 21116 14921 14921 1 65272 0 LGPEGELLIR GLVVFAIVFGVALRKLGPEGELLIRFFNSF VALRKLGPEGELLIRFFNSFNEATMVLVSW K L G I R F 0 1 0 0 0 0 2 2 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 1095.6288 Q15758 Q15758 248 257 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.00093084 126.07 By MS/MS 5.38 3.04 1 1 1 1 1 1 1 1 8 18481000 18481000 0 8490 1518 8779 21117;21118;21119;21120;21121;21122;21123;21124 14922;14923;14924;14925;14926;14927 14927 6 841540 0 LGPETGLLFPR LPRFYGHPCPFEGRRLGPETGLLFPRLDQS EGRRLGPETGLLFPRLDQSRTWLVKAHRT_ R L G P R L 0 1 0 0 0 0 1 2 0 0 3 0 0 1 2 0 1 0 0 0 0 0 11 0 1198.671 Q96GW9 Q96GW9 569 579 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 0.00014321 166.07 By MS/MS 6 0 1 1 0 0 0 8491 2186 8780 21125 14928 14928 1 0 0 LGPFLLNAVR RVVVTGHKVLFTVGKLGPFLLNAVRWLDGG FTVGKLGPFLLNAVRWLDGGRRGKVVVQTE K L G V R W 1 1 1 0 0 0 0 1 0 0 3 0 0 1 1 0 0 0 0 1 0 0 10 0 1098.655 Q9Y4C2 Q9Y4C2 282 291 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 2.3694E-05 174.27 By MS/MS 4 0 1 1 269650 269650 0 8492 2952 8781 21126 14929 14929 1 7361.3 0 LGPGGLDPVEVYESLPEELQK EKAMKEYEEEERKKRLGPGGLDPVEVYESL DPVEVYESLPEELQKCFDVKDVQMLQDAIS R L G Q K C 0 0 0 1 0 1 4 3 0 0 4 1 0 0 3 1 0 0 1 2 0 0 21 0 2268.1525 Q16543 Q16543 287 307 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 2;3 1.0763E-18 181.71 By MS/MS 6 0 2 2 9598200 9598200 0 8493 1539 8782 21127;21128 14930;14931 14930 2 74847 0 LGPGSSGGSAR ______________________________ GRRRLGPGSSGGSARERVSLSATDCYIVHE R L G A R E 1 1 0 0 0 0 0 4 0 0 1 0 0 0 1 3 0 0 0 0 0 0 11 0 944.46756 P17152 P17152 9 19 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.020358 89.029 By MS/MS 9.5 0.5 1 1 2 1627400 1627400 0 8494 612 8783 21129;21130 14932 14932 1 953920 0 LGPLAFYK GEYQGVFHCAVETAKLGPLAFYKGLVPAGI CAVETAKLGPLAFYKGLVPAGIRLIPHTVL K L G Y K G 1 0 0 0 0 0 0 1 0 0 2 1 0 1 1 0 0 0 1 0 0 0 8 0 907.51674 Q9UBX3 Q9UBX3 247 254 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2 0.034077 97.596 By MS/MS 5.29 3.37 1 1 1 1 1 1 1 7 16051000 16051000 0 8495 2761 8784 21131;21132;21133;21134;21135;21136;21137 14933;14934;14935 14933 3 1372800 0 LGPLLDILADSR LFPLLLRLLDPTSSRLGPLLDILADSRHLW SSRLGPLLDILADSRHLWSPFGLRSLAASS R L G S R H 1 1 0 2 0 0 0 1 0 1 4 0 0 0 1 1 0 0 0 0 0 0 12 0 1281.7293 Q13724 Q13724 709 720 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 0.00045289 140.78 By MS/MS 5.83 1.34 1 2 1 1 1 6 1705300 1705300 0 8496 1396 8785 21138;21139;21140;21141;21142;21143 14936;14937;14938;14939;14940;14941;14942 14939 7 59795 0 LGPLLLDPSLAVR RPALPGLARRDAVRRLGPLLLDPSLAVRET RRLGPLLLDPSLAVRETAAGALRNLSACGG R L G V R E 1 1 0 1 0 0 0 1 0 0 5 0 0 0 2 1 0 0 0 1 0 0 13 0 1362.8235 Q7Z4Q2 Q7Z4Q2 84 96 HEATR3 HEAT repeat-containing protein 3 yes yes 2 0.0058849 100.82 By MS/MS 6 0.816 1 1 1 3 1071900 1071900 0 8497 1795 8786 21144;21145;21146 14943;14944 14943 2 36459 0 LGPLQVAR DRGIHVEVPPAEAERLGPLQVARVLAKLAE PPAEAERLGPLQVARVLAKLAEKEKVDLVL R L G A R V 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 0 0 0 0 1 0 0 8 0 852.51814 P38117 P38117 99 106 ETFB Electron transfer flavoprotein subunit beta yes yes 2 0.019482 107.43 By MS/MS 8 0 1 1 2253400 2253400 0 8498 816 8787 21147 14945 14945 1 148660 0 LGPNDQYK PDVCWDRNNPEPWNKLGPNDQYKFYSVNVD NPEPWNKLGPNDQYKFYSVNVDYSKLKKER K L G Y K F 0 0 1 1 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 8 0 933.4556 O00483 O00483 56 63 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.01022 119.41 By MS/MS By matching 10 0 2 1 1 11991000 11948000 43016 8499 99 8788 21148;21149 14946 14946 1 12699000 1103300 LGPNDQYKFYSVNVDYSK PDVCWDRNNPEPWNKLGPNDQYKFYSVNVD NDQYKFYSVNVDYSKLKKERPDF_______ K L G S K L 0 0 2 2 0 1 0 1 0 0 1 2 0 1 1 2 0 0 3 2 0 0 18 1 2136.0164 O00483 O00483 56 73 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 3 0.0033914 89.344 By MS/MS 10 0 1 1 794770 794770 0 8500 99 8789 21150 14947 14947 1 844760 0 LGQALTEVYAK DSISETVILRGEPEKLGQALTEVYAKANSF EPEKLGQALTEVYAKANSFTVSSVAAPSWL K L G A K A 2 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 1 0 1 1 0 0 11 0 1191.6499 Q00341 Q00341 350 360 HDLBP Vigilin yes yes 2 0.00012219 158.47 By MS/MS 3 0 1 1 4226000 4226000 0 8501 1231 8790 21151 14948 14948 1 110320 0 LGQEATVGK VNLTLDGVKSWLKPRLGQEATVGKATGFLK SWLKPRLGQEATVGKATGFLKNFLIEPFVP R L G G K A 1 0 0 0 0 1 1 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 901.4869 P53396 P53396 89 97 ACLY ATP-citrate synthase yes yes 2 0.0007076 148.69 By MS/MS 5.25 3.15 1 1 1 1 1 1 1 1 8 34990000 34990000 0 8502 1001 8791 21152;21153;21154;21155;21156;21157;21158;21159 14949;14950;14951;14952 14951 4 1407800 0 LGQHVVGMAPLSVGSLDDEPGGEAETK ETSEQKTNLEDVGRRLGQHVVGMAPLSVGS VGSLDDEPGGEAETKMLSQPYLLDPSITLG R L G T K M 2 0 0 2 0 1 3 5 1 0 3 1 1 0 2 2 1 0 0 3 0 0 27 0 2692.3014 P43897 P43897 256 282 TSFM Elongation factor Ts, mitochondrial yes yes 2;3 1.0145E-08 104.77 By MS/MS 8 0 3 3 14776000 14776000 0 8503 868 8792;8793 21160;21161;21162 14953;14954;14955 14955 622 3 974770 0 LGRLDQAVLDLQR GDVKALYRRSQALEKLGRLDQAVLDLQRCV EKLGRLDQAVLDLQRCVSLEPKNKVFQEAL K L G Q R C 1 2 0 2 0 2 0 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 13 1 1495.8471 Q9H3U1 Q9H3U1 105 117 UNC45A Protein unc-45 homolog A yes yes 3 0.012911 79.646 By MS/MS 4 0 1 1 574890 574890 0 8504 2493 8794 21163 14956 14956 1 15694 0 LGSAVVTR AHRSELKHAKRIVVKLGSAVVTRGDECGLA AKRIVVKLGSAVVTRGDECGLALGRLASIV K L G T R G 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 2 0 0 8 0 801.47085 P54886 P54886 77 84 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0029878 150.05 By MS/MS 5 0 1 1 12074000 12074000 0 8505 1019 8795 21164 14957 14957 1 496290 0 LGSAVVTRGDECGLALGR AHRSELKHAKRIVVKLGSAVVTRGDECGLA AVVTRGDECGLALGRLASIVEQVSVLQNQG K L G G R L 2 2 0 1 1 0 1 4 0 0 3 0 0 0 0 1 1 0 0 2 0 0 18 1 1829.9418 P54886 P54886 77 94 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 0.001211 128.35 By MS/MS 5.33 0.471 2 1 3 2310400 2310400 0 8506 1019 8796 21165;21166;21167 14958;14959 14959 2 62580 0 LGSIAEIDLGVPPPVMK DVHIMQHHVLPIQARLGSIAEIDLGVPPPV SIAEIDLGVPPPVMKTFKEFLLSLDDSVDE R L G M K T 1 0 0 1 0 0 1 2 0 2 2 1 1 0 3 1 0 0 0 2 0 0 17 0 1734.959 Q9BXP5 Q9BXP5 134 150 SRRT Serrate RNA effector molecule homolog yes yes 2 9.2345E-14 180.24 By MS/MS 4 0 1 1 397270 397270 0 8507 2402 8797 21168 14960 14960 1482 1 10845 0 LGSIAIQGAIEK IGSFLGSLSLLPATKLGSIAIQGAIEKAGI ATKLGSIAIQGAIEKAGIPKEEVKEAYMGN K L G E K A 2 0 0 0 0 1 1 2 0 3 1 1 0 0 0 1 0 0 0 0 0 0 12 0 1198.6921 P24752 P24752 67 78 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 8.7039E-11 196.44 By MS/MS By MS/MS 7 0 2 1 1 43461000 43279000 181760 8508 680 8798 21169;21170 14961;14962 14961 2 773410 746150 LGSKDVVIK YVAKSPDEAYAIAKKLGSKDVVIKAQVLAG YAIAKKLGSKDVVIKAQVLAGGRGKGTFES K L G I K A 0 0 0 1 0 0 0 1 0 1 1 2 0 0 0 1 0 0 0 2 0 0 9 1 957.58588 Q9P2R7 Q9P2R7 90 98 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 3 0.0011195 124.92 By MS/MS 7 0 1 1 1956300 1956300 0 8509 2741 8799 21171 14963 14963 1 34959 0 LGSLVDEFK AVDLTLPKVEAMNKRLGSLVDEFKELVYPP EAMNKRLGSLVDEFKELVYPPDYNPEGKVT R L G F K E 0 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 0 1 0 0 9 0 1006.5335 P12956 P12956 518 526 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.00066831 149.57 By MS/MS 5 0 1 1 713700 713700 0 8510 569 8800 21172 14964 14964 1 29336 0 LGSLVENNER EPTAQQNLALQLAEKLGSLVENNERVFDHK QLAEKLGSLVENNERVFDHKQGTYGGYFRD K L G E R V 0 1 2 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1129.5728 Q99613;B5ME19 Q99613 863 872 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.00064272 139.38 By MS/MS By MS/MS 4.2 2.18 1 2 1 2 1 1 1 1 7 3 48346000 47847000 499350 8511 2275 8801 21173;21174;21175;21176;21177;21178;21179;21180;21181;21182 14965;14966;14967;14968;14969;14970 14965 6 1315900 936300 LGSRPQPAEAYAEAVQR VLRWEQVVDLTYSHRLGSRPQPAEAYAEAV SRPQPAEAYAEAVQRLLYVPPTWTYECDED R L G Q R L 4 2 0 0 0 2 2 1 0 0 1 0 0 0 2 1 0 0 1 1 0 0 17 1 1841.9384 Q5T447 Q5T447 190 206 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 3 0.0026164 102.72 By MS/MS 4 0 1 1 1155500 1155500 0 8512 1626 8802 21183 14971 14971 1 31544 0 LGSSGLGSASSIQAAVR DDTRRANKKAKQTGRLGSSGLGSASSIQAA SSGLGSASSIQAAVRQLEAEADAIIQMVRE R L G V R Q 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 5 0 0 0 1 0 0 17 0 1559.8267 Q7Z6Z7 Q7Z6Z7 3750 3766 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 8.1474E-25 243.37 By MS/MS 2.5 1.12 1 1 1 1 4 1868400 1868400 0 8513 1803 8803 21184;21185;21186;21187 14972;14973;14974 14972 3 65236 0 LGSSTLGSK PPSSRRNVGMGTTRRLGSSTLGSKSSAAKE MGTTRRLGSSTLGSKSSAAKEGAGAVDEED R L G S K S 0 0 0 0 0 0 0 2 0 0 2 1 0 0 0 3 1 0 0 0 0 0 9 0 848.46035 Q7Z460 Q7Z460 278 286 CLASP1 CLIP-associating protein 1 yes yes 2 0.0348 88.37 By MS/MS 3 0 1 1 301260 301260 0 8514 1790 8804 21188 14975 14975 1 7864.5 0 LGSTDLCYIAAVK ASALKRMSVLASYEKLGSTDLCYIAAVKGA EKLGSTDLCYIAAVKGAPETLHSMFSQCPP K L G V K G 2 0 0 1 1 0 0 1 0 1 2 1 0 0 0 1 1 0 1 1 0 0 13 0 1409.7225 Q9HD20 Q9HD20 642 654 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0038957 136.49 By MS/MS 1 0 1 1 310760 310760 0 8515 2566 8805 21189 14976 14976 1 15183 0 LGSTEVASNVPK APGMNTIDQGMAALKLGSTEVASNVPKVVG ALKLGSTEVASNVPKVVGSAVGSGSITSNI K L G P K V 1 0 1 0 0 0 1 1 0 0 1 1 0 0 1 2 1 0 0 2 0 0 12 0 1200.635 Q9Y5A9 Q9Y5A9 194 205 YTHDF2 YTH domain-containing family protein 2 yes yes 2 4.4984E-07 208.15 By MS/MS 5.5 0.5 1 1 2 9033100 9033100 0 8516 2966 8806 21190;21191 14977;14978 14977 2 280760 0 LGSTVFVANLDYK PNIPNEIIHALQAGRLGSTVFVANLDYKVG GRLGSTVFVANLDYKVGWKKLKEVFSMAGV R L G Y K V 1 0 1 1 0 0 0 1 0 0 2 1 0 1 0 1 1 0 1 2 0 0 13 0 1425.7504 P52272 P52272 202 214 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0011643 129.34 By MS/MS 5 0 1 1 971100 971100 0 8517 982 8807 21192 14979 14979 1 39916 0 LGSVDSFER LENIFSRGANRMRGRLGSVDSFERSNSLAS NRMRGRLGSVDSFERSNSLASEKDYSPGDS R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 O60343 O60343 586 594 TBC1D4 TBC1 domain family member 4 yes yes 2 0.0098655 105.1 By MS/MS 3.5 0.5 1 1 2 657000 657000 0 8518 246 8808 21193;21194 14980 14980 1 17228 0 LGSVPVTVK LWGGLLYIIVPQNSKLGSVPVTVKGAVHAP VPQNSKLGSVPVTVKGAVHAPYYKLGETTL K L G V K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 1 1 0 0 3 0 0 9 0 898.54877 Q9Y4C2 Q9Y4C2 624 632 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 0.0028097 121.09 By MS/MS 4 0 1 1 560050 560050 0 8519 2952 8809 21195 14981 14981 1 15289 0 LGSVSLDLCDGDTGEPR QQYAWLCSQLRRKARLGSVSLDLCDGDTGE SVSLDLCDGDTGEPRYTLHVVDSPTVKPSR R L G P R Y 0 1 0 3 1 0 1 3 0 0 3 0 0 0 1 2 1 0 0 1 0 0 17 0 1789.8152 Q8N6R0 Q8N6R0 265 281 METTL13 Methyltransferase-like protein 13 yes yes 2 0.001824 141.37 By MS/MS 5 0 1 1 663400 663400 0 8520 1930 8810 21196 14982 14982 1 27268 0 LGTDEISPR DNYPQSVPRLFISTRLGTDEISPRVLQALG LFISTRLGTDEISPRVLQALGSEPIQYAVP R L G P R V 0 1 0 1 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 0 0 9 0 986.50327 O00159 O00159 901 909 MYO1C Unconventional myosin-Ic yes yes 2 0.0098655 105.1 By MS/MS By matching 4 0 2 1 1 3560400 3538700 21670 8521 72 8811 21197;21198 14983 14983 1 96604 45282 LGTDLEYLKK LIAKNRQEYEDIAVKLGTDLEYLKKVRGKV DIAVKLGTDLEYLKKVRGKVWKQRISSPLF K L G K K V 0 0 0 1 0 0 1 1 0 0 3 2 0 0 0 0 1 0 1 0 0 0 10 1 1178.6547 O15294 O15294 983 992 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 3 0.0029565 106.68 By MS/MS 4 0 1 1 402140 402140 0 8522 167 8812 21199 14984 14984 1 10978 0 LGTEPTSETQDELQR PEMEDLPSKGVQEERLGTEPTSETQDELQR LGTEPTSETQDELQRLLGLLRDQDPLSEEQ R L G Q R L 0 1 0 1 0 2 3 1 0 0 2 0 0 0 1 1 3 0 0 0 0 0 15 0 1702.801 O15381 O15381 516 530 NVL Nuclear valosin-containing protein-like yes yes 2 1.5369E-14 207.34 By MS/MS 4 0 1 1 771130 771130 0 8523 174 8813 21200 14985 14985 1 21051 0 LGTGFNPNTLDK SYTEDWAIVIRKYHKLGTGFNPNTLDKQKE YHKLGTGFNPNTLDKQKERQKGLPKQVFES K L G D K Q 0 0 2 1 0 0 0 2 0 0 2 1 0 1 1 0 2 0 0 0 0 0 12 0 1275.6459 Q96N67 Q96N67 134 145 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.00060626 164.48 By MS/MS 2 0 1 1 2307000 2307000 0 8524 2230 8814 21201 14986 14986 1 114670 0 LGTLSALDILIK PILASFLRKNQRALKLGTLSALDILIKNYS ALKLGTLSALDILIKNYSDSLTAAMIDAVL K L G I K N 1 0 0 1 0 0 0 1 0 2 4 1 0 0 0 1 1 0 0 0 0 0 12 0 1255.7751 Q86VP6 Q86VP6 668 679 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00029231 148.32 By MS/MS 3.5 0.5 1 1 2 268750 268750 0 8525 1829 8815 21202;21203 14987;14988 14988 2 7288.3 0 LGTLSPAFSTR FYIDYGNREVLPSTRLGTLSPAFSTRVLPA PSTRLGTLSPAFSTRVLPAQATEYAFAFIQ R L G T R V 1 1 0 0 0 0 0 1 0 0 2 0 0 1 1 2 2 0 0 0 0 0 11 0 1148.619 Q7KZF4 Q7KZF4 777 787 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.0056435 112.36 By MS/MS 4 0 1 1 3795800 3795800 0 8526 1757 8816 21204 14989 14989 1 103620 0 LGTPDEQLEMANCQAVILSVEDDTGHR LGVILPAVMLALKEKLGTPDEQLEMANCQA CQAVILSVEDDTGHRIIIEYLLEATRSPEV K L G H R I 2 1 1 3 1 2 3 2 1 1 3 0 1 0 1 1 2 0 0 2 0 0 27 0 2997.3808 Q92616 Q92616 2124 2150 GCN1L1 Translational activator GCN1 yes yes 3 0.041729 40.718 By MS/MS 2 0 1 1 146770 146770 0 8527 2068 8817 21205 14990 14990 1 7295.5 0 LGTPQQIAIAR ESKYAPLHLVPLIERLGTPQQIAIAREGDL LIERLGTPQQIAIAREGDLLTKERLCCGLS R L G A R E 2 1 0 0 0 2 0 1 0 2 1 0 0 0 1 0 1 0 0 0 0 0 11 0 1166.6772 Q7L576;Q96F07 Q7L576 1066 1076 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.0056192 117.53 By MS/MS 4 0.816 1 1 1 3 2368500 2368500 0 8528 1765 8818 21206;21207;21208 14991 14991 1 64776 0 LGTPVLQALGDGDFVK TDSAYVVASMRIMTRLGTPVLQALGDGDFV GTPVLQALGDGDFVKCLHSVGQPLTGQGEP R L G V K C 1 0 0 2 0 1 0 3 0 0 3 1 0 1 1 0 1 0 0 2 0 0 16 0 1628.8774 Q16822 Q16822 194 209 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 2.1806E-10 228.62 By MS/MS 5.5 0.957 1 2 2 1 6 19017000 19017000 0 8529 1550 8819 21209;21210;21211;21212;21213;21214 14992;14993;14994;14995 14994 4 299500 0 LGTQTFCSR KGLIEGKSDPYALVRLGTQTFCSRVIDEEL PYALVRLGTQTFCSRVIDEELNPQWGETYE R L G S R V 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 9 0 1068.5022 Q9BSJ8 Q9BSJ8 364 372 ESYT1 Extended synaptotagmin-1 yes yes 2 0.024114 94.409 By MS/MS 4 0.816 1 1 1 3 5387500 5387500 0 8530 2339 8820 21215;21216;21217 14996;14997 14996 2 147610 0 LGTSAEGAHLR MTEDLLEEQSEVLAKLGTSAEGAHLRARMQ VLAKLGTSAEGAHLRARMQSACLLSDMESF K L G L R A 2 1 0 0 0 0 1 2 1 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1110.5782 Q15042 Q15042 661 671 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 0.0017315 123.86 By MS/MS 3 0 1 1 668590 668590 0 8531 1469 8821 21218 14998 14998 1 17454 0 LGTSESLPCTAEELSR RRLSSTSLASGHSVRLGTSESLPCTAEELS GTSESLPCTAEELSRSTTELLPRRPPSSSS R L G S R S 1 1 0 0 1 0 3 1 0 0 3 0 0 0 1 3 2 0 0 0 0 0 16 0 1748.8251 Q9BZL6 Q9BZL6 209 224 PRKD2 Serine/threonine-protein kinase D2 yes yes 2 1.9163E-06 154.67 By MS/MS 4 0 1 1 1102200 1102200 0 8532 2425 8822 21219 14999 14999 1 30090 0 LGTSGLNQPTFQQSK LGLPAVNNDPFVQRKLGTSGLNQPTFQQSK LGTSGLNQPTFQQSKMKPSDLSQVWPEANQ K L G S K M 0 0 1 0 0 3 0 2 0 0 2 1 0 1 1 2 2 0 0 0 0 0 15 0 1604.8158 A5YKK6 A5YKK6 809 823 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00038073 127.52 By MS/MS 2 0 1 1 267250 267250 0 8533 19 8823 21220 15000 15000 1 13284 0 LGVDLDAQTWR GGGLLENIPRVLPEKLGVDLDAQTWRIPRV LPEKLGVDLDAQTWRIPRVFSWLQQEGHLS K L G W R I 1 1 0 2 0 1 0 1 0 0 2 0 0 0 0 0 1 1 0 1 0 0 11 0 1272.6463 P22102 P22102 698 708 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00019578 155.11 By MS/MS 4 0 1 1 277310 277310 0 8534 655 8824 21221 15001 15001 1 7570.1 0 LGVEAALINTNLR ENRNEFVGLWLGMAKLGVEAALINTNLRRD AKLGVEAALINTNLRRDALLHCLTTSRARA K L G L R R 2 1 2 0 0 0 1 1 0 1 3 0 0 0 0 0 1 0 0 1 0 0 13 0 1382.7882 Q6P1M0 Q6P1M0 149 161 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.0031732 113.38 By MS/MS 2 0.816 1 1 1 3 314870 314870 0 8535 1701 8825 21222;21223;21224 15002 15002 1 13221 0 LGVEQLR YETRFLCNSSQEWKRLGVEQLRLSTVDMTG NSSQEWKRLGVEQLRLSTVDMTGIPTLDNL R L G L R L 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 813.47085 Q8WUK0 Q8WUK0 90 96 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.018407 130.77 By MS/MS 8 0.816 1 1 1 3 4581700 4581700 0 8536 2017 8826 21225;21226;21227 15003 15003 1 2334000 0 LGVIEDHSNR KYNDTFWKEFGTNIKLGVIEDHSNRTRLAK GTNIKLGVIEDHSNRTRLAKLLRFQSSHHP K L G N R T 0 1 1 1 0 0 1 1 1 1 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1138.5731 P14625;Q58FF3 P14625 494 503 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 2 0.0019183 117.53 By MS/MS 4.5 0.5 1 1 2 3400300 3400300 0 8537 589 8827 21228;21229 15004 15004 1 95716 0 LGVLHVGQK QSLLARRSLQAQLQRLGVLHVGQKLEEQDE QAQLQRLGVLHVGQKLEEQDEFEKIYKNAW R L G Q K L 0 0 0 0 0 1 0 2 1 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 949.5709 Q9NTJ5 Q9NTJ5 415 423 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 3 0.031572 96.19 By MS/MS 1.5 0.5 1 1 2 471320 471320 0 8538 2631 8828 21230;21231 15005 15005 1 23120 0 LGVLHVGQKLEEQDEFEK QSLLARRSLQAQLQRLGVLHVGQKLEEQDE LHVGQKLEEQDEFEKIYKNAWADNANACAK R L G E K I 0 0 0 1 0 2 4 2 1 0 3 2 0 1 0 0 0 0 0 2 0 0 18 1 2097.0742 Q9NTJ5 Q9NTJ5 415 432 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 3 0.01087 72.433 By MS/MS 6 0 1 1 6358300 6358300 0 8539 2631 8829 21232 15006 15006 1 49582 0 LGVQVVITDPEK KIACLDFSLQKTKMKLGVQVVITDPEKLDQ KMKLGVQVVITDPEKLDQIRQRESDITKER K L G E K L 0 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 1 0 0 3 0 0 12 0 1296.7289 P17987 P17987 248 259 TCP1 T-complex protein 1 subunit alpha yes yes 2 4.7697E-11 204.56 By MS/MS 5.5 1.12 1 1 1 1 4 15025000 15025000 0 8540 619 8830 21233;21234;21235;21236 15007 15007 1 128050 0 LGVQVVITDPEKLDQIR KIACLDFSLQKTKMKLGVQVVITDPEKLDQ VQVVITDPEKLDQIRQRESDITKERIQKIL K L G I R Q 0 1 0 2 0 2 1 1 0 2 2 1 0 0 1 0 1 0 0 3 0 0 17 1 1922.0837 P17987 P17987 248 264 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 2.779E-10 174.39 By MS/MS 6 0 2 2 49449000 49449000 0 8541 619 8831 21237;21238 15008;15009 15009 2 385600 0 LGVSCEVIDLR QVHVIREVASMAKEKLGVSCEVIDLRTIIP AKEKLGVSCEVIDLRTIIPWDVDTICKSVI K L G L R T 0 1 0 1 1 0 1 1 0 1 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1259.6544 P21953 P21953 295 305 BCKDHB 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes yes 2 6.1327E-05 167.67 By MS/MS 7.5 0.5 1 1 2 2128000 2128000 0 8542 652 8832 21239;21240 15010;15011 15011 2 111040 0 LGYEVSR HQALLSFCRMSADSRLGYEVSRIADSEKSV CRMSADSRLGYEVSRIADSEKSVMLMLGRC R L G S R I 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 7 0 822.42357 Q9P260 Q9P260 505 511 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 2 0.040651 107.59 By MS/MS 3 0 1 1 428600 428600 0 8543 2735 8833 21241 15012 15012 1 11189 0 LGYPVLVR EAANSLEQAQAAAERLGYPVLVRAAFALGG AQAAAERLGYPVLVRAAFALGGLGSGFASN R L G V R A 0 1 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 1 2 0 0 8 0 915.55419 P27708 P27708 548 555 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.019239 107.74 By MS/MS 3 1.41 1 1 1 1 1 5 2150200 2150200 0 8544 709 8834 21242;21243;21244;21245;21246 15013;15014;15015 15014 3 93008 0 LHDEKEETAGSYDSR FGAEGLASLLDILKRLHDEKEETAGSYDSR LHDEKEETAGSYDSRNKHEIIRCLKAFMNN R L H S R N 1 1 0 2 0 0 3 1 1 0 1 1 0 0 0 2 1 0 1 0 0 0 15 1 1735.7649 O60610 O60610 198 212 DIAPH1 Protein diaphanous homolog 1 yes yes 3 0.0039661 78.249 By MS/MS 3 0 1 1 467030 467030 0 8545 255 8835 21247 15016 15016 1 12192 0 LHDSLAIER SGTLVMDAYEPEISRLHDSLAIERKIK___ EPEISRLHDSLAIERKIK____________ R L H E R K 1 1 0 1 0 0 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1052.5615 Q15005 Q15005 215 223 SPCS2 Signal peptidase complex subunit 2 yes yes 2 2.504E-06 186.76 By MS/MS 7.5 1.12 1 1 1 1 4 15489000 15489000 0 8546 1458 8836 21248;21249;21250;21251 15017 15017 1 1615500 0 LHEEGIIYR MDPKLSAAVTEAFVRLHEEGIIYRSTRLVN TEAFVRLHEEGIIYRSTRLVNWSCTLNSAI R L H Y R S 0 1 0 0 0 0 2 1 1 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1128.5928 P26640 P26640 462 470 VARS Valine--tRNA ligase yes yes 2 0.0074791 110.31 By MS/MS 3 0 1 1 1947500 1947500 0 8547 699 8837 21252 15018 15018 1 50840 0 LHFDNCVLKPATEGK HFDLPQQEERERLVRLHFDNCVLKPATEGK LHFDNCVLKPATEGKRRLKLAQFDYGRKCS R L H G K R 1 0 1 1 1 0 1 1 1 0 2 2 0 1 1 0 1 0 0 1 0 0 15 1 1727.8665 Q5T9A4 Q5T9A4 487 501 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 3 0.012425 77.42 By MS/MS 5 0 1 1 2856500 2856500 0 8548 1634 8838 21253 15019 15019 1 117410 0 LHFFMPGFAPLTSR ADLRKLAVNMVPFPRLHFFMPGFAPLTSRG RLHFFMPGFAPLTSRGSQQYRALTVPELTQ R L H S R G 1 1 0 0 0 0 0 1 1 0 2 0 1 3 2 1 1 0 0 0 0 0 14 0 1619.8283 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;P04350;Q3ZCM7;Q9BUF5 P68371 263 276 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 2;3 0.00013671 143.4 By MS/MS 6 0 4 4 103230000 103230000 0 8549 1187;490;1400;2375;451;2363;1572 8839;8840 21254;21255;21256;21257 15020;15021;15022;15023 15023 236 4 804980 0 LHGLDEEAEQK THIDVIHYRKTDAKRLHGLDEEAEQKLFSE DAKRLHGLDEEAEQKLFSEKRVELLKELSR R L H Q K L 1 0 0 1 0 1 3 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1267.6044 P33991 P33991 429 439 MCM4 DNA replication licensing factor MCM4 yes yes 2;3 0.0002879 142.98 By MS/MS 4 0 2 2 2852500 2852500 0 8550 773 8841 21258;21259 15024;15025 15025 2 77870 0 LHGLDEEAEQKLFSEK THIDVIHYRKTDAKRLHGLDEEAEQKLFSE HGLDEEAEQKLFSEKRVELLKELSRKPDIY R L H E K R 1 0 0 1 0 1 4 1 1 0 3 2 0 1 0 1 0 0 0 0 0 0 16 1 1871.9265 P33991 P33991 429 444 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.0017555 109.07 By MS/MS 4 0 1 1 2891000 2891000 0 8551 773 8842 21260 15026 15026 1 78921 0 LHICDHFTR EGRQQICNQQPPCSRLHICDHFTRGNCRFP QPPCSRLHICDHFTRGNCRFPNCLRSHNLM R L H T R G 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1197.5713 Q7Z2W4 Q7Z2W4 171 179 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3 0.005523 101.46 By MS/MS 4.5 0.5 1 1 2 1099000 1099000 0 8552 1777 8843 21261;21262 15027 15027 1 33589 0 LHKNDIAINELMK NARERIVGWYHTGPKLHKNDIAINELMKRY PKLHKNDIAINELMKRYCPNSVLVIIDVKP K L H M K R 1 0 2 1 0 0 1 0 1 2 2 2 1 0 0 0 0 0 0 0 0 0 13 1 1537.8286 P51665 P51665 101 113 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 3 0.023573 78.401 By MS/MS 7 0 1 1 2456100 2456100 0 8553 975 8844 21263 15028 15028 733 0 43892 0 LHLIEEK SRDQLRQLFKDNPFKLHLIEEKVTGPTATV LFKDNPFKLHLIEEKVTGPTATVYGCGTLV K L H E K V 0 0 0 0 0 0 2 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 7 0 880.50182 Q9BW92 Q9BW92 216 222 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.047626 102.77 By MS/MS 6 1.41 1 1 1 1 1 5 6712700 6712700 0 8554 2391 8845 21264;21265;21266;21267;21268 15029 15029 1 204950 0 LHLQTVPSK YSETLLSYFYKCPVRLHLQTVPSKVVYKYL YKCPVRLHLQTVPSKVVYKYL_________ R L H S K V 0 0 0 0 0 1 0 0 1 0 2 1 0 0 1 1 1 0 0 1 0 0 9 0 1021.592 Q96EL2 Q96EL2 153 161 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 0.0007076 148.69 By MS/MS 10 0 1 1 572580 572580 0 8555 2162 8846 21269 15030 15030 1 608600 0 LHNAANANQK KVSEGVEQFEDIWQKLHNAANANQKEKYEA DIWQKLHNAANANQKEKYEADLKKEIKKLQ K L H Q K E 3 0 3 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1079.5472 O75175 O75175 32 41 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 2 0.0022716 116.37 By MS/MS 4 0 1 1 136120 136120 0 8556 289 8847 21270 15031 15031 1 3715.8 0 LHNSLNEK ILSKLSEETKVALTKLHNSLNEKSIEDFIS TKVALTKLHNSLNEKSIEDFISCLDSAAEA K L H E K S 0 0 2 0 0 0 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 953.49304 O94874 O94874 626 633 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.020124 106.6 By MS/MS 5.5 0.5 1 1 2 1324500 1324500 0 8557 354 8848 21271;21272 15032 15032 1 50321 0 LHPEDFPEEDKK YLYAVRDREMFGYMKLHPEDFPEEDKKTYG YMKLHPEDFPEEDKKTYGEIFEKFHPIR__ K L H K K T 0 0 0 2 0 0 3 0 1 0 1 2 0 1 2 0 0 0 0 0 0 0 12 1 1482.6991 O95298 O95298 95 106 NDUFC2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes yes 3 0.0072101 95.094 By MS/MS 10 0 1 1 282790 282790 0 8558 383 8849 21273 15033 15033 1 300570 0 LHPESKDDKHGSYEDAVHSGALND TEAAITILRIDDLIKLHPESKDDKHGSYED HGSYEDAVHSGALND_______________ K L H N D - 2 0 1 4 0 0 2 2 3 0 2 2 0 0 1 3 0 0 1 1 0 0 24 2 2620.179 P17987 P17987 533 556 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.0015828 84.859 By MS/MS 6.33 0.471 2 1 3 22060000 22060000 0 8559 619 8850 21274;21275;21276 15034;15035 15034 2 173270 0 LHPVILASIVDSYER GPALPGPFPGGRVVRLHPVILASIVDSYER LHPVILASIVDSYERRNEGAARVIGTLLGT R L H E R R 1 1 0 1 0 0 1 0 1 2 2 0 0 0 1 2 0 0 1 2 0 0 15 0 1710.9305 O00303 O00303 94 108 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2;3 4.3811E-07 162.49 By MS/MS 6 0 2 2 11796000 11796000 0 8560 88 8851 21277;21278 15036;15037 15037 2 91983 0 LHQEDNDYINASLIK NRYRDVSPFDHSRIKLHQEDNDYINASLIK LHQEDNDYINASLIKMEEAQRSYILTQGPL K L H I K M 1 0 2 2 0 1 1 0 1 2 2 1 0 0 0 1 0 0 1 0 0 0 15 0 1771.8741 P18031 P18031 59 73 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2;3 7.4111E-10 183.89 By MS/MS 6.8 0.748 2 2 1 5 8031500 8031500 0 8561 620 8852 21279;21280;21281;21282;21283 15038;15039 15039 2 82507 0 LHQSVTK EGQRRNVAVVNSLYKLHQSVTKAIHALMEN AVVNSLYKLHQSVTKAIHALMENAVQPLLT K L H T K A 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 7 0 811.4552 Q9UP83 Q9UP83 587 593 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.021341 126.28 By MS/MS 4 0 1 1 0 0 0 8562 2850 8853 21284 15040 15040 1 0 0 LHSEPILQDLSR DVSVMNQVCREQFVRLHSEPILQDLSRFLV FVRLHSEPILQDLSRFLVKRFCSEPQKILE R L H S R F 0 1 0 1 0 1 1 0 1 1 3 0 0 0 1 2 0 0 0 0 0 0 12 0 1406.7518 O00411 O00411 1174 1185 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00048389 139.32 By MS/MS 3 0 1 1 3415700 3415700 0 8563 92 8854 21285 15041 15041 1 89166 0 LHSHDIK CGSVLKLLNTHHRVRLHSHDIKYGSGSGQQ LNTHHRVRLHSHDIKYGSGSGQQSVTGVEA R L H I K Y 0 0 0 1 0 0 0 0 2 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 848.45045 Q9HCN8 Q9HCN8 53 59 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 0.020651 124.59 By MS/MS 9 0 1 1 656870 656870 0 8564 2563 8855 21286 15042 15042 1 376990 0 LHSLLGDYYQAIK LYKMLGYFSLVGLLRLHSLLGDYYQAIKVL LRLHSLLGDYYQAIKVLENIELNKKSMYSR R L H I K V 1 0 0 1 0 1 0 1 1 1 3 1 0 0 0 1 0 0 2 0 0 0 13 0 1519.8035 Q9Y262 Q9Y262 280 292 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 1.5151E-08 193.22 By MS/MS 6 0 2 2 5224000 5224000 0 8565 2868 8856 21287;21288 15043;15044 15043 2 40737 0 LHSMKEGIHAQQK KVPQLEIVPNSAEERLHSMKEGIHAQQKEP ERLHSMKEGIHAQQKEPMIGVNQELAYFYP R L H Q K E 1 0 0 0 0 2 1 1 2 1 1 2 1 0 0 1 0 0 0 0 0 0 13 1 1505.7773 CON__P02662 CON__P02662 120 132 yes yes 3 0.011859 80.17 By MS/MS 5.5 0.5 1 1 2 791380 791380 0 + 8566 37 8857 21289;21290 15045 15045 20 1 23266 0 LHTAVVSTPPR QRWRCLRLQGLQACRLHTAVVSTPPRWLAE QACRLHTAVVSTPPRWLAERLGLFEELWAA R L H P R W 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 1 2 0 0 2 0 0 11 0 1176.6615 Q9BW92 Q9BW92 20 30 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.00038541 147.4 By MS/MS 5.5 0.5 1 1 2 1225300 1225300 0 8567 2391 8858 21291;21292 15046 15046 1 28607 0 LHTLEEEKEELAQYQK KREKINELLKYIEERLHTLEEEKEELAQYQ HTLEEEKEELAQYQKWDKMRRALEYTIYNQ R L H Q K W 1 0 0 0 0 2 5 0 1 0 3 2 0 0 0 0 1 0 1 0 0 0 16 1 1986.9898 Q9UQE7 Q9UQE7 200 215 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.001013 114.64 By MS/MS 3 0 1 1 1499500 1499500 0 8568 2860 8859 21293 15047 15047 1 39144 0 LHTVQPK VLTTLTPDTGRILSKLHTVQPKGKITFCTG DTGRILSKLHTVQPKGKITFCTGIRVAHLA K L H P K G 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 1 0 0 1 0 0 7 0 821.47594 P55036;A2A3N6 P55036 75 81 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 2 0.017424 133.47 By MS/MS 6 0 1 1 3814300 3814300 0 8569 1023 8860 21294 15048 15048 1 29744 0 LHVENEDKK MIMLRISDDKYGRIRLHVENEDKKGVQLQT KYGRIRLHVENEDKKGVQLQTHPNVDKKLF R L H K K G 0 0 1 1 0 0 2 0 1 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1110.5669 P48444 P48444 315 323 ARCN1 Coatomer subunit delta yes yes 2;3 0.00083111 163.15 By MS/MS 6.33 0.471 2 1 3 15098000 15098000 0 8570 903 8861 21295;21296;21297 15049;15050 15050 2 118960 0 LHVSEQNAQR NHAEAIVKTLQELQKLHVSEQNAQRANLFH QELQKLHVSEQNAQRANLFHKLVTELRGLS K L H Q R A 1 1 1 0 0 2 1 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1180.5949 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 332 341 yes yes 2 0.00029365 153.05 By MS/MS 4.57 2.44 1 1 1 1 1 1 1 7 3949900 3949900 0 + 8571 31 8862 21298;21299;21300;21301;21302;21303;21304 15051;15052;15053 15053 3 147280 0 LIAAERER RRIHQESELHSYLSRLIAAERERELEECQR LHSYLSRLIAAERERELEECQRNHEGDEDD R L I E R E 2 2 0 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 1 956.54033 Q9UNE7 Q9UNE7 168 175 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 0.024765 147.34 By MS/MS 8 0 1 1 1055600 1055600 0 8572 2838 8863 21305 15054 15054 1 69638 0 LIAAQTGTR RVKCNTDDTIGDLKKLIAAQTGTRWNKIVL IGDLKKLIAAQTGTRWNKIVLKKWYTIFKD K L I T R W 2 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 9 0 929.52943 Q9BZL1 Q9BZL1 30 38 UBL5 Ubiquitin-like protein 5 yes yes 2 0.0008397 145.72 By MS/MS 10 0 1 1 1464100 1464100 0 8573 2424 8864 21306 15055 15055 1 1556200 0 LIADVAPSAIR ______________________________ GLAKLIADVAPSAIRENDIKSYFGRKVAID K L I I R E 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1124.6554 P39748 P39748 9 19 FEN1 Flap endonuclease 1 yes yes 2 0.0060668 103.26 By MS/MS 8 1.41 1 1 1 1 1 5 17241000 17241000 0 8574 826 8865 21307;21308;21309;21310;21311 15056 15056 1 562240 0 LIADVGLVGFPNAGK LPLKGQKRIIHLDLKLIADVGLVGFPNAGK LIADVGLVGFPNAGKSSLLSCVSHAKPAIA K L I G K S 2 0 1 1 0 0 0 3 0 1 2 1 0 1 1 0 0 0 0 2 0 0 15 0 1469.8242 A4D1E9 A4D1E9 147 161 GTPBP10 GTP-binding protein 10 yes yes 2 7.1138E-10 184.36 By MS/MS 7.5 0.5 1 1 2 2540200 2540200 0 8575 14 8866 21312;21313 15057 15057 1 48675 0 LIAEEGVDSLNVK FQLTMRLRSIKADDKLIAEEGVDSLNVKEL DKLIAEEGVDSLNVKELQAACRARGMRALG K L I V K E 1 0 1 1 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 2 0 0 13 0 1385.7402 O95202 O95202 361 373 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 3.497E-18 229.82 By MS/MS 5 0.816 1 1 1 3 5170600 5170600 0 8576 374 8867 21314;21315;21316 15058 15058 1 177380 0 LIAEGPGETVLVAEEEAAR TALPLYFVGLYCDKKLIAEGPGETVLVAEE GPGETVLVAEEEAARVALRKLYGFTENRRP K L I A R V 4 1 0 0 0 0 5 2 0 1 2 0 0 0 1 0 1 0 0 2 0 0 19 0 1953.0055 Q9H9J2 Q9H9J2 280 298 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2;3 6.7012E-26 222.56 By MS/MS 7.67 0.471 1 2 3 6150900 6150900 0 8577 2535 8868 21317;21318;21319 15059;15060 15059 2 403110 0 LIAELAR ______________________________ ARKKVRPRLIAELARRVRALREQLNRPRDS R L I A R R 2 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 784.48069 P82930 P82930 10 16 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.043839 105.39 By MS/MS By matching 8.33 0.471 2 1 2 1 14036000 13990000 46181 8578 1209 8869 21320;21321;21322 15061 15061 1 981220 393980 LIAINANDPEASK LGILALIDEGETDWKLIAINANDPEASKFH WKLIAINANDPEASKFHDIDDVKKFKPGYL K L I S K F 3 0 2 1 0 0 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 13 0 1354.7092 Q9H2U2 Q9H2U2 204 216 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 2 1.3066E-08 194.48 By MS/MS 8 0 1 1 2541500 2541500 0 8579 2483 8870 21323 15062 15062 1 167660 0 LIAPVAEEEATVPNNK ______________________________ IAPVAEEEATVPNNKITVVGVGQVGMACAI K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 P07195 P07195 8 23 LDHB L-lactate dehydrogenase B chain yes yes 2 9.1057E-21 218.62 By MS/MS 8.5 1.12 1 1 1 1 4 23983000 23983000 0 8580 486 8871 21324;21325;21326;21327 15063;15064;15065;15066 15064 4 2392200 0 LIASSLVAGEK TAYGEFLSRLRENPRLIASSLVAGEKLNQE ENPRLIASSLVAGEKLNQENTQSVIYTVFT R L I E K L 2 0 0 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 0 1 0 0 11 0 1086.6285 Q14C86 Q14C86 109 119 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 4.9868E-05 169.41 By MS/MS 4.4 1.85 1 1 1 1 1 5 3220900 3220900 0 8581 1455 8872 21328;21329;21330;21331;21332 15067;15068;15069 15067 3 100100 0 LIASYCNVGDIEGASK MEEANIQPNRVTYQRLIASYCNVGDIEGAS IASYCNVGDIEGASKILGFMKTKDLPVTEA R L I S K I 2 0 1 1 1 0 1 2 0 2 1 1 0 0 0 2 0 0 1 1 0 0 16 0 1695.8138 P42704 P42704 203 218 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.3023E-38 259.27 By MS/MS By MS/MS 4 2 1 1 5 1 1 1 1 1 11 1 130910000 130530000 372160 8582 854 8873 21333;21334;21335;21336;21337;21338;21339;21340;21341;21342;21343;21344 15070;15071;15072;15073;15074;15075;15076;15077;15078;15079;15080 15077 11 3486700 533380 LICCDILDVLDK KMIREYRQMVETELKLICCDILDVLDKHLI ELKLICCDILDVLDKHLIPAANTGESKVFY K L I D K H 0 0 0 3 2 0 0 0 0 2 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1475.7364 P62258 P62258 95 106 YWHAE 14-3-3 protein epsilon yes yes 2 0.00056738 138.25 By MS/MS 8 0 1 1 2034400 2034400 0 8583 1121 8874 21345 15081 15081 1 134210 0 LICDVSRQELNK VLLQGKNPDITKAWKLICDVSRQELNKIYD AWKLICDVSRQELNKIYDALDVSLIERGES K L I N K I 0 1 1 1 1 1 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 12 1 1473.761 P54136 P54136 310 321 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0014717 152.69 By MS/MS 5 0 1 1 911120 911120 0 8584 1013 8875 21346 15082 15082 1 37451 0 LICLVTGSPSIR YGAPPHGGIALGLDRLICLVTGSPSIRDVI LDRLICLVTGSPSIRDVIAFPKSFRGHDLM R L I I R D 0 1 0 0 1 0 0 1 0 2 2 0 0 0 1 2 1 0 0 1 0 0 12 0 1314.733 Q6PI48 Q6PI48 588 599 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 1.1498E-11 212.03 By MS/MS 5 0 2 2 2762300 2762300 0 8585 1715 8876 21347;21348 15083;15084 15083 2 113540 0 LIDDMVAQVLK YKTDFDKNKIWYEHRLIDDMVAQVLKSSGG YEHRLIDDMVAQVLKSSGGFVWACKNYDGD R L I L K S 1 0 0 2 0 1 0 0 0 1 2 1 1 0 0 0 0 0 0 2 0 0 11 0 1243.6846 P48735 P48735 289 299 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 2.9299E-05 170.47 By MS/MS 6.67 0.471 1 2 3 3687000 3687000 0 8586 912 8877;8878 21349;21350;21351 15085;15086 15085 651 2 63767 0 LIDFGIANQMQPDTTSVVK DLKPANFLIVDGMLKLIDFGIANQMQPDTT GIANQMQPDTTSVVKDSQVGTVNYMPPEAI K L I V K D 1 0 1 2 0 2 0 1 0 2 1 1 1 1 1 1 2 0 0 2 0 0 19 0 2076.0561 P33981 P33981 662 680 TTK Dual specificity protein kinase TTK yes yes 2 2.7952E-34 238.65 By MS/MS 4 0 1 1 668400 668400 0 8587 772 8879 21352 15087 15087 522 1 18247 0 LIDFLECGK DLERGVEICIATPGRLIDFLECGKTNLRRT IATPGRLIDFLECGKTNLRRTTYLVLDEAD R L I G K T 0 0 0 1 1 0 1 1 0 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1093.5478 P17844 P17844 228 236 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.00079132 146.81 By MS/MS 5 0 1 1 3893500 3893500 0 8588 616 8880 21353 15088 15088 1 160040 0 LIDFLESGK DLERGVEICIATPGRLIDFLESGKTNLRRC IATPGRLIDFLESGKTNLRRCTYLVLDEAD R L I G K T 0 0 0 1 0 0 1 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 9 0 1020.5492 Q92841 Q92841 305 313 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.0024319 125.16 By MS/MS 5 0 1 1 1364900 1364900 0 8589 2082 8881 21354 15089 15089 1 56102 0 LIDGIVLTK FNRALADHSMAQTPRLIDGIVLTKFDTIDD MAQTPRLIDGIVLTKFDTIDDKVGAAISMT R L I T K F 0 0 0 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 1 0 0 9 0 970.60628 P08240 P08240 581 589 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.0074461 123.35 By MS/MS 5 0 1 1 1756500 1756500 0 8590 502 8882 21355 15090 15090 1 72199 0 LIDIFYPGDQQSVTFGTK VEGLFDSPPGSDDAKLIDIFYPGDQQSVTF IFYPGDQQSVTFGTKSRVGMGGMEAKVKAA K L I T K S 0 0 0 2 0 2 0 2 0 2 1 1 0 2 1 1 2 0 1 1 0 0 18 0 2028.0204 P54886 P54886 283 300 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0033492 132.23 By MS/MS 5.5 0.5 1 1 2 3646600 3646600 0 8591 1019 8883 21356;21357 15091 15091 1 32463 0 LIDIGNSCR GLQEREVKCVEDVLKLIDIGNSCRTSGQTS VEDVLKLIDIGNSCRTSGQTSANAHSSRSH K L I C R T 0 1 1 1 1 0 0 1 0 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1046.5179 O00139 O00139 413 421 KIF2A Kinesin-like protein KIF2A yes yes 2 0.050542 81.525 By MS/MS 4 0 1 1 330010 330010 0 8592 69 8884 21358 15092 15092 1 9008.9 0 LIDLCQPTQK MESIKRLYPGSVYGRLIDLCQPTQKKYQIA SVYGRLIDLCQPTQKKYQIAVTKVLGKNMD R L I Q K K 0 0 0 1 1 2 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 10 0 1214.6329 Q14683 Q14683 519 528 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.022487 90.629 By MS/MS 3 0 1 1 2590400 2590400 0 8593 1440 8885 21359 15093;15094 15093 2 67623 0 LIDLHSPSEIVK GSKTWDRFQMRIHKRLIDLHSPSEIVKQIT HKRLIDLHSPSEIVKQITSISIEPGVEVEV R L I V K Q 0 0 0 1 0 0 1 0 1 2 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1349.7555 P60866 P60866 88 99 RPS20 40S ribosomal protein S20 yes yes 2;3 7.4821E-05 160.59 By MS/MS By matching 10 0 3 2 1 9927100 9888300 38853 8594 1075 8886 21360;21361;21362 15095;15096 15096 2 10510000 996540 LIDNISSR TFERKLPVSSLTISRLIDNISSREEIDHAE SSLTISRLIDNISSREEIDHAEYYLYKFRH R L I S R E 0 1 1 1 0 0 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 8 0 916.49779 Q92552 Q92552 75 82 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0038959 144.38 By MS/MS By matching 7 0 2 1 1 18057000 17998000 59235 8595 2059 8887 21363;21364 15097 15097 1 321620 243170 LIDPQVDESR KMQLNVKNVPLKTIRLIDPQVDESRVLGAL LKTIRLIDPQVDESRVLGALLPFLDAQYQK R L I S R V 0 1 0 2 0 1 1 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1170.5881 Q63HN8 Q63HN8 2025 2034 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.0056906 105.2 By MS/MS 1.5 0.5 1 1 2 185890 185890 0 8596 1666 8888 21365;21366 15098 15098 1 9137.4 0 LIDREIISHDTR PAITLESPDIKYPLRLIDREIISHDTRRFR PLRLIDREIISHDTRRFRFALPSPQHILGL R L I T R R 0 2 0 2 0 0 1 0 1 3 1 0 0 0 0 1 1 0 0 0 0 0 12 1 1466.7841 P00387 P00387 47 58 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 3 0.003321 100.04 By MS/MS 8 0 1 1 2138500 2138500 0 8597 427 8889 21367 15099 15099 1 141080 0 LIDRENFVDIVDAK AQEALGPPLNIHYLKLIDRENFVDIVDAKL KLIDRENFVDIVDAKLKIPVSGSKSEGLLY K L I A K L 1 1 1 3 0 0 1 0 0 2 1 1 0 1 0 0 0 0 0 2 0 0 14 1 1645.8675 Q9GZY4 Q9GZY4 75 88 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 3 0.0021695 105.03 By MS/MS 10 0 1 1 1004800 1004800 0 8598 2444 8890 21368 15100 15100 1 1068000 0 LIDSLEWMDDGLVNDITPK HIDEVVYPPPVDPKKLIDSLEWMDDGLVND LEWMDDGLVNDITPKLIGDRPNTYIYTKAL K L I P K L 0 0 1 4 0 0 1 1 0 2 3 1 1 0 1 1 1 1 0 1 0 0 19 0 2173.0613 Q8WVX9 Q8WVX9 177 195 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.002488 98.676 By MS/MS 6 0 1 1 214480 214480 0 8599 2036 8891 21369 15101 15101 1 1672.5 0 LIDTVKDPVSK VKILENLRGGTNIIKLIDTVKDPVSKTPAL NIIKLIDTVKDPVSKTPALVFEYINNTDFK K L I S K T 0 0 0 2 0 0 0 0 0 1 1 2 0 0 1 1 1 0 0 2 0 0 11 1 1213.6918 P19784 P19784 98 108 CSNK2A2 Casein kinase II subunit alpha yes yes 2 0.0078219 147.3 By MS/MS 7 0 1 1 691110 691110 0 8600 636 8892 21370 15102 15102 1 12350 0 LIECDTLSR TSSLDSRRQLFSSHKLIECDTLSRKKSARF LFSSHKLIECDTLSRKKSARFKSDSGSLGD K L I S R K 0 1 0 1 1 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1105.5438 Q5T5U3 Q5T5U3 1697 1705 ARHGAP21 Rho GTPase-activating protein 21 yes yes 2 0.0063795 130.75 By MS/MS 2 0 1 1 0 0 0 8601 1628 8893 21371 15103 15103 1 0 0 LIEDFLAR VNKQLDKMGFNIGVRLIEDFLARSNVGRCH GFNIGVRLIEDFLARSNVGRCHDFRETADV R L I A R S 1 1 0 1 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 8 0 975.53893 O43617 O43617 55 62 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2 0.0052547 136.16 By MS/MS 9.5 0.5 1 1 2 3286800 3286800 0 8602 210 8894 21372;21373 15104;15105 15104 2 2854000 0 LIEDSTLSK PHFSAKMNSLKEVTKLIEDSTLSKSVKNAI LKEVTKLIEDSTLSKSVKNAIDTDRLLDWL K L I S K S 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 9 0 1004.539 Q9UPU5 Q9UPU5 413 421 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.044743 82.75 By MS/MS 2 0.816 1 1 1 3 1122700 1122700 0 8603 2854 8895 21374;21375;21376 15106 15106 1 49243 0 LIEESCPQLANSVQIR PLLQGPDITLSKLYKLIEESCPQLANSVQI IEESCPQLANSVQIRIKLMAEGELKDMEQF K L I I R I 1 1 1 0 1 2 2 0 0 2 2 0 0 0 1 2 0 0 0 1 0 0 16 0 1855.9462 Q9UJX4 Q9UJX4 81 96 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2 4.6767E-21 225.72 By MS/MS 5 0 1 1 2863500 2863500 0 8604 2804 8896 21377 15107 15107 1 117700 0 LIEEVMIGEDK STFDHPELVKLGSCKLIEEVMIGEDKLIHF GSCKLIEEVMIGEDKLIHFSGVALGEACTI K L I D K L 0 0 0 1 0 0 3 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1274.6428 P78371 P78371 348 358 CCT2 T-complex protein 1 subunit beta yes yes 2 5.9608E-05 167.93 By MS/MS 5.67 0.471 1 2 3 12664000 12664000 0 8605 1195 8897;8898 21378;21379;21380 15108;15109 15108 947 1 113370 0 LIEIENFK ______________________________ ______________________________ K L I F K S 0 0 1 0 0 0 2 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 Q14683 Q14683 6 13 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.010322 119.27 By MS/MS 2.5 1.12 1 1 1 1 4 4809100 4809100 0 8606 1440 8899 21381;21382;21383;21384 15110 15110 1 128680 0 LIEKLDIK VFDAIMNFKKEETAKLIEKLDIKLDSEDKD KKEETAKLIEKLDIKLDSEDKDKEGKPLLK K L I I K L 0 0 0 1 0 0 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 8 1 970.60628 P13639 P13639 315 322 EEF2 Elongation factor 2 yes yes 2;3 0.018043 143.89 By MS/MS 5.17 1.07 2 2 1 1 6 10315000 10315000 0 8607 576 8900 21385;21386;21387;21388;21389;21390 15111;15112 15112 2 278740 0 LIELKEHPAHER IKESDNNVKLIVLDRLIELKEHPAHERVLQ LDRLIELKEHPAHERVLQDLVMDILRVLST R L I E R V 1 1 0 0 0 0 3 0 2 1 2 1 0 0 1 0 0 0 0 0 0 0 12 1 1470.7943 P53618 P53618 305 316 COPB1 Coatomer subunit beta yes yes 3 0.0090893 96.745 By MS/MS 3.5 0.5 1 1 2 1995200 1995200 0 8608 1004 8901 21391;21392 15113 15113 1 54156 0 LIESLFTIQK LKRRNLIIEAVTNLRLIESLFTIQKMIMDQ VTNLRLIESLFTIQKMIMDQEKQEGVSTKC R L I Q K M 0 0 0 0 0 1 1 0 0 2 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1190.6911 Q12789 Q12789 630 639 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 8.389E-15 214.96 By MS/MS 2 0 1 1 0 0 0 8609 1306 8902 21393 15114 15114 1 0 0 LIEVDDERK ______________________________ ATGCQKLIEVDDERKLRTFYEKRMATEVAA K L I R K L 0 1 0 2 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1115.5823 P62753 P62753 15 23 RPS6 40S ribosomal protein S6 yes yes 2 0.00084188 162.97 By MS/MS 8 0 1 1 1022000 1022000 0 8610 1143 8903 21394 15115 15115 1 67422 0 LIEYYQQLAQK GWQEPENPHTQRMNKLIEYYQQLAQKEKVE RMNKLIEYYQQLAQKEKVERDRKKLARRRN K L I Q K E 1 0 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 0 2 0 0 0 11 0 1395.7398 Q9UJW0 Q9UJW0 147 157 DCTN4 Dynactin subunit 4 yes yes 2 0.00025587 161.17 By MS/MS 6 0 1 1 3801200 3801200 0 8611 2801 8904 21395 15116 15116 1 29642 0 LIFDNLKK DDNFASIVTGVEEGRLIFDNLKKSIAYTLT TGVEEGRLIFDNLKKSIAYTLTSNIPEITP R L I K K S 0 0 1 1 0 0 0 0 0 1 2 2 0 1 0 0 0 0 0 0 0 0 8 1 989.59097 P05023;P50993;Q13733;P20648;P13637;P54707 P05023 767 774 ATP1A1;ATP1A2;ATP1A4;ATP4A;ATP1A3;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2 no no 2;3 0.0044798 159.2 By MS/MS 3.09 1.38 2 2 2 3 2 11 12054000 12054000 0 8612 463;575;1016 8905 21396;21397;21398;21399;21400;21401;21402;21403;21404;21405;21406 15117;15118;15119;15120 15119 4 383750 0 LIFQMPQNK QLFYLLQTNPLYLAKLIFQMPQNKSTKFMD PLYLAKLIFQMPQNKSTKFMDTVIFTLYNY K L I N K S 0 0 1 0 0 2 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 9 0 1117.5954 P46940;Q13576;Q86VI3 Q13576 902 910 IQGAP1;IQGAP2;IQGAP3 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP2;Ras GTPase-activating-like protein IQGAP3 no no 2 0.0010988 134.06 By MS/MS 3 0 1 1 1287200 1287200 0 8613 1383;892;1827 8906 21407 15121 15121 631 1 33603 0 LIFSTITSK DRKIEFPLPDRRQKRLIFSTITSKMNLSEE DRRQKRLIFSTITSKMNLSEEVDLEDYVAR R L I S K M 0 0 0 0 0 0 0 0 0 2 1 1 0 1 0 2 2 0 0 0 0 0 9 0 1008.5855 P43686 P43686 343 351 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.0010413 141.2 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 18428000 18376000 51472 8614 867 8907 21408;21409;21410;21411;21412;21413 15122;15123;15124;15125 15122 4 540480 157860 LIFYDLR KVAGRIHAKRASGGKLIFYDLRGEGVKLQV AKRASGGKLIFYDLRGEGVKLQVMANSRNY K L I L R G 0 1 0 1 0 0 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 0 7 0 938.52255 Q15046 Q15046 142 148 KARS Lysine--tRNA ligase yes yes 2 0.043839 105.39 By MS/MS 5 0 1 1 1459400 1459400 0 8615 1471 8908 21414 15126 15126 1 59988 0 LIGDRPNTYIYTK LEWMDDGLVNDITPKLIGDRPNTYIYTKAL PKLIGDRPNTYIYTKALAEYVVQQEGAKLN K L I T K A 0 1 1 1 0 0 0 1 0 2 1 1 0 0 1 0 2 0 2 0 0 0 13 1 1552.8249 Q8WVX9 Q8WVX9 196 208 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.011444 124.6 By MS/MS 6 0 1 1 8429800 8429800 0 8616 2036 8909 21415 15127 15127 1 65736 0 LIGEMNSLFDEVR LSPEEIQMFEQENQRLIGEMNSLFDEVRQI QRLIGEMNSLFDEVRQIEGRVVEISRLQEI R L I V R Q 0 1 1 1 0 0 2 1 0 1 2 0 1 1 0 1 0 0 0 1 0 0 13 0 1521.7497 Q9P2W9 Q9P2W9 242 254 STX18 Syntaxin-18 yes yes 2 5.32E-08 188.96 By MS/MS 6.25 0.829 1 1 2 4 2694900 2694900 0 8617 2742 8910;8911 21416;21417;21418;21419 15128;15129 15128 1602 2 51425 0 LIGEYGLR PRRPFEKSRLDQELKLIGEYGLRNKREVWR RLDQELKLIGEYGLRNKREVWRVKFTLAKI K L I L R N 0 1 0 0 0 0 1 2 0 1 2 0 0 0 0 0 0 0 1 0 0 0 8 0 919.51272 P46781 P46781 31 38 RPS9 40S ribosomal protein S9 yes yes 2 0.0079015 126.28 By MS/MS By matching 9 0.707 1 2 1 3 1 17419000 17292000 126860 8618 887 8912 21420;21421;21422;21423 15130;15131 15131 2 9026600 1367200 LIGNLCYK DISNVANGFKSHLIRLIGNLCYKNKDNQDK FKSHLIRLIGNLCYKNKDNQDKVNELDGIP R L I Y K N 0 0 1 0 1 0 0 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 8 0 979.51609 Q9UBB4 Q9UBB4 377 384 ATXN10 Ataxin-10 yes yes 2 0.010104 119.56 By MS/MS 5.5 1.12 1 1 1 1 4 6234100 6234100 0 8619 2744 8913 21424;21425;21426;21427 15132 15132 1 104640 0 LIGNMALLPIR ______________________________ PDTKLIGNMALLPIRSQFKGPAPRETKDTD K L I I R S 1 1 1 0 0 0 0 1 0 2 3 0 1 0 1 0 0 0 0 0 0 0 11 0 1209.7267 O15145 O15145 15 25 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 2 0.0042718 102.51 By MS/MS 9.5 0.5 1 1 2 778480 778480 0 8620 153 8914 21428;21429 15133 15133 94 1 482220 0 LIGPNCPGVINPGECK MVRVKHKLLRQEKTRLIGPNCPGVINPGEC IGPNCPGVINPGECKIGIMPGHIHKKGRIG R L I C K I 0 0 2 0 2 0 1 3 0 2 1 1 0 0 3 0 0 0 0 1 0 0 16 0 1723.8386 P53597 P53597 167 182 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 2.2035E-07 161.25 By MS/MS 8 0 1 1 2681600 2681600 0 8621 1002 8915 21430 15134 15134 1 176910 0 LIGQIVSSITASLR RNLDIERPTYTNLNRLIGQIVSSITASLRF RLIGQIVSSITASLRFDGALNVDLTEFQTN R L I L R F 1 1 0 0 0 1 0 1 0 3 2 0 0 0 0 3 1 0 0 1 0 0 14 0 1456.8613 Q71U36;P0DPH8;P0DPH7;Q6PEY2 Q71U36 230 243 TUBA1A;TUBA3E Tubulin alpha-1A chain;Tubulin alpha-3E chain yes no 2 5.5516E-05 153.75 By MS/MS 6 0 1 1 1442400 1442400 0 8622 1754 8916 21431 15135 15135 1 11248 0 LIGQLNLK LFVGGELIDPADDRKLIGQLNLKDKSLITA DPADDRKLIGQLNLKDKSLITAKLTQISSN K L I L K D 0 0 1 0 0 1 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 897.56475 Q93008;O00507 Q93008 949 956 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.00842 124.34 By MS/MS 2 0.816 1 1 1 3 1462700 1462700 0 8623 2096 8917 21432;21433;21434 15136 15136 1 63710 0 LIGVPADAEALSER LPVDMQLKKEKKCVKLIGVPADAEALSERS KLIGVPADAEALSERSGNTPNSPRLAAESK K L I E R S 3 1 0 1 0 0 2 1 0 1 2 0 0 0 1 1 0 0 0 1 0 0 14 0 1439.762 Q96EA4 Q96EA4 535 548 SPDL1 Protein Spindly yes yes 2 0.010391 100.69 By MS/MS 5 0 1 1 2942300 2942300 0 8624 2160 8918 21435 15137 15137 1 120940 0 LIGWGQIR GEKIALSRRVEKHWRLIGWGQIRRGVTIKP RVEKHWRLIGWGQIRRGVTIKPTVDDD___ R L I I R R 0 1 0 0 0 1 0 2 0 2 1 0 0 0 0 0 0 1 0 0 0 0 8 0 941.54469 P41091;Q2VIR3 P41091 453 460 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.0087856 122.98 By MS/MS 7 0.816 1 1 1 3 4611900 4611900 0 8625 836 8919 21436;21437;21438 15138 15138 1 48429 0 LIHDGCLLWK PGKGPFGREELLRRKLIHDGCLLWKTATGR LLRRKLIHDGCLLWKTATGRFKDVLVLLMT K L I W K T 0 0 0 1 1 0 0 1 1 1 3 1 0 0 0 0 0 1 0 0 0 0 10 0 1253.6591 Q92974 Q92974 473 482 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 3 0.028212 95.358 By MS/MS 4 0 1 1 115710 115710 0 8626 2094 8920 21439 15139 15139 0 3158.8 0 LIIAGTSAYAR DYNQLALTARLFRPRLIIAGTSAYARLIDY FRPRLIIAGTSAYARLIDYARMREVCDEVK R L I A R L 3 1 0 0 0 0 0 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 11 0 1134.6397 P34897 P34897 220 230 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.00045026 172.94 By MS/MS By MS/MS 6.5 0.5 1 1 1 1 887940 797140 90800 8627 777 8921 21440;21441 15140;15141 15141 2 14245 278480 LIINELSNVMEANAAR PERWTNIPLLVKILKLIINELSNVMEANAA IINELSNVMEANAARQATPAEWSQDDSNDM K L I A R Q 3 1 3 0 0 0 2 0 0 2 2 0 1 0 0 1 0 0 0 1 0 0 16 0 1756.9142 Q96P70 Q96P70 920 935 IPO9 Importin-9 yes yes 2 0.0118 89.44 By MS/MS 4 0 1 1 93405 93405 0 8628 2237 8922 21442 15142 15142 1 2549.9 0 LIINSLYK SEKFAFQAEVNRMMKLIINSLYKNKEIFLR EVNRMMKLIINSLYKNKEIFLRELISNASD K L I Y K N 0 0 1 0 0 0 0 0 0 2 2 1 0 0 0 1 0 0 1 0 0 0 8 0 962.58007 P14625 P14625 88 95 HSP90B1 Endoplasmin yes yes 2 0.0094613 120.46 By MS/MS 6 1.41 1 1 1 1 1 5 5660600 5660600 0 8629 589 8923 21443;21444;21445;21446;21447 15143 15143 1 151400 0 LIITEETAK APVYKRVMPDGKIQKLIITEETAKIRPFAV DGKIQKLIITEETAKIRPFAVAAVLRNIKF K L I A K I 1 0 0 0 0 0 2 0 0 2 1 1 0 0 0 0 2 0 0 0 0 0 9 0 1016.5754 Q9NSD9 Q9NSD9 108 116 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.030852 90.601 By MS/MS 5 0 1 1 1004000 1004000 0 8630 2623 8924 21448 15144 15144 1 41267 0 LIITQVR THIKGFTLNDAANSRLIITQVRRDYLKEAV LNDAANSRLIITQVRRDYLKEAVTTLKTVL R L I V R R 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 1 0 0 1 0 0 7 0 841.53854 P42704 P42704 1110 1116 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.040651 107.59 By MS/MS By matching 5.62 2.12 2 1 1 1 1 1 1 7 1 90410000 90005000 405290 8631 854 8925 21449;21450;21451;21452;21453;21454;21455;21456 15145;15146;15147 15147 3 2401600 580860 LIIVASQAMR PRCTMVEAFDRWGKKLIIVASQAMRYRALI RWGKKLIIVASQAMRYRALIGQEGDPDLKL K L I M R Y 2 1 0 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 0 1 0 0 10 0 1100.6376 Q12789 Q12789 149 158 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00021723 152.11 By MS/MS 2 0 1 1 659890 659890 0 8632 1306 8926 21457 15148 15148 1040 1 32800 0 LIIVEGCQR YHTEIVFARTSPQQKLIIVEGCQRQGAIVA TSPQQKLIIVEGCQRQGAIVAVTGDGVNDS K L I Q R Q 0 1 0 0 1 1 1 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1086.5856 P05023;P50993;Q13733;P13637;P54707 P05023 699 707 ATP1A1;ATP1A2;ATP1A4;ATP1A3;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2 no no 2 4.686E-06 178.83 By MS/MS 3 1.41 1 1 1 1 1 5 31723000 31723000 0 8633 463;575;1016 8927 21458;21459;21460;21461;21462 15149;15150;15151;15152;15153 15150 5 1139200 0 LIIWDSYTTNK GTDSRLLVSASQDGKLIIWDSYTTNKVHAI QDGKLIIWDSYTTNKVHAIPLRSSWVMTCA K L I N K V 0 0 1 1 0 0 0 0 0 2 1 1 0 0 0 1 2 1 1 0 0 0 11 0 1352.6976 P62873;P62879;Q9HAV0 P62879 79 89 GNB1;GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 no no 2 0.00034828 148.91 By MS/MS 8 0 1 1 2544200 2544200 0 8634 1156;1154 8928 21463 15154 15154 1 167840 0 LIKDDIER VFGSQHQMDVAFLEKLIKDDIERGRLPLLL DVAFLEKLIKDDIERGRLPLLLVANAGTAA K L I E R G 0 1 0 2 0 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1000.5553 Q6P996;Q6P474 Q6P996 224 231 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 3 0.0064701 130.75 By MS/MS 5.5 0.5 1 1 2 905960 905960 0 8635 1712 8929 21464;21465 15155 15155 1 27632 0 LIKEGDIVK LEPDNVGVVVFGNDKLIKEGDIVKRTGAIV VFGNDKLIKEGDIVKRTGAIVDVPVGEELL K L I V K R 0 0 0 1 0 0 1 1 0 2 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1013.6121 P25705 P25705 124 132 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 0.0045004 105.1 By MS/MS 6 0 1 1 1888700 1888700 0 8636 687 8930 21466 15156 15156 1 14728 0 LIKEGDIVKR LEPDNVGVVVFGNDKLIKEGDIVKRTGAIV FGNDKLIKEGDIVKRTGAIVDVPVGEELLG K L I K R T 0 1 0 1 0 0 1 1 0 2 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1169.7132 P25705 P25705 124 133 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 0.010616 95.483 By MS/MS By matching 6 0 2 1 1 10668000 10612000 55858 8637 687 8931 21467;21468 15157 15157 1 82753 171310 LIKHEMTK CHATNEVAQLIQGGRLIKHEMTKTASA___ QLIQGGRLIKHEMTKTASA___________ R L I T K T 0 0 0 0 0 0 1 0 1 1 1 2 1 0 0 0 1 0 0 0 0 0 8 1 998.55829 Q9Y5U8 Q9Y5U8 98 105 MPC1 Mitochondrial pyruvate carrier 1 yes yes 3 0.0098957 95.815 By MS/MS 10 0 1 1 0 0 0 8638 2981 8932 21469 15158 15158 1716 1 0 0 LIKVHLDK EIVGKRIRVKLDGSRLIKVHLDKAQQNNVE VKLDGSRLIKVHLDKAQQNNVEHKVETFSG R L I D K A 0 0 0 1 0 0 0 0 1 1 2 2 0 0 0 0 0 0 0 1 0 0 8 1 964.60695 P62081 P62081 153 160 RPS7 40S ribosomal protein S7 yes yes 3 0.010156 103.83 By MS/MS 9 0 1 1 340120 340120 0 8639 1113 8933 21470 15159 15159 1 195200 0 LILSTDTLEELK PRDTSFSGLSLEEYKLILSTDTLEELKEID EYKLILSTDTLEELKEIDKGMWKKLQEKFA K L I L K E 0 0 0 1 0 0 2 0 0 1 4 1 0 0 0 1 2 0 0 0 0 0 12 0 1373.7654 Q9BRT2 Q9BRT2 90 101 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 2 3.2802E-05 169.76 By MS/MS 10 0 1 1 246880 246880 0 8640 2329 8934 21471 15160 15160 1 262410 0 LIMAGNYEEALCVAK IGERCNVAGSRKFAKLIMAGNYEEALCVAK LIMAGNYEEALCVAKVQVEMGAQVLDVNMD K L I A K V 3 0 1 0 1 0 2 1 0 1 2 1 1 0 0 0 0 0 1 1 0 0 15 0 1680.8215 Q99707 Q99707 389 403 MTR Methionine synthase yes yes 2 1.464E-06 156.36 By MS/MS 3 0 1 1 802030 802030 0 8641 2284 8935 21472 15161 15161 1434 1 20937 0 LIMAMQTLIPIDEAK LSTEDVPLARMLVPKLIMAMQTLIPIDEAK LIMAMQTLIPIDEAKACEALEALDELLESE K L I A K A 2 0 0 1 0 1 1 0 0 3 2 1 2 0 1 0 1 0 0 0 0 0 15 0 1685.9096 Q8TEX9 Q8TEX9 206 220 IPO4 Importin-4 yes yes 2 2.3565E-14 198.57 By MS/MS 3.67 0.471 1 2 3 1236900 1236900 0 8642 2005 8936;8937 21473;21474;21475 15162;15163 15162 1315 2 33673 0 LIMGIGHR IIPMEFVNKMKKEGKLIMGIGHRVKSINNP KMKKEGKLIMGIGHRVKSINNPDMRVQILK K L I H R V 0 1 0 0 0 0 0 2 1 2 1 0 1 0 0 0 0 0 0 0 0 0 8 0 895.50619 P53396 P53396 969 976 ACLY ATP-citrate synthase yes yes 3 0.0065107 119.56 By MS/MS 2.67 1.25 1 1 1 3 4081400 4081400 0 8643 1001 8938 21476;21477;21478 15164;15165 15165 760 2 115030 0 LIMNYLVTEGFK EKLNNLHVQRADMNRLIMNYLVTEGFKEAA MNRLIMNYLVTEGFKEAAEKFRMESGIEPS R L I F K E 0 0 1 0 0 0 1 1 0 1 2 1 1 1 0 0 1 0 1 1 0 0 12 0 1426.753 Q9NWU2 Q9NWU2 32 43 GID8 Glucose-induced degradation protein 8 homolog yes yes 2 6.2235E-05 157.78 By MS/MS 8 0 1 1 617910 617910 0 8644 2669 8939 21479 15166 15166 1571 1 40764 0 LINANMMVLGHEPR PIQSVKGKVVIDAFRLINANMMVLGHEPRQ RLINANMMVLGHEPRQTTSNLGHLNKPSIQ R L I P R Q 1 1 2 0 0 0 1 1 1 1 2 0 2 0 1 0 0 0 0 1 0 0 14 0 1593.812 O00487 O00487 162 175 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 3 0.008101 78.903 By MS/MS 8 0 1 1 873860 873860 0 8645 100 8940 21480 15167 15167 68;69 1 57648 0 LINAVELK GYEEARGDQCDKCGKLINAVELKKPQCKVC QCDKCGKLINAVELKKPQCKVCRSCPVVQS K L I L K K 1 0 1 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 898.54877 P56192 P56192 424 431 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.017179 110.41 By MS/MS 4.5 0.5 1 1 2 7298000 7298000 0 8646 1042 8941 21481;21482 15168 15168 1 205050 0 LINLVGESLR TDYNNNHEGREEDQRLINLVGESLRLLGNT EEDQRLINLVGESLRLLGNTFVALSDLRCN R L I L R L 0 1 1 0 0 0 1 1 0 1 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1112.6554 P46379 P46379 322 331 BAG6 Large proline-rich protein BAG6 yes yes 2 0.0028742 114.4 By MS/MS 3.5 0.5 1 1 2 3001200 3001200 0 8647 880 8942 21483;21484 15169 15169 1 78626 0 LIPLITSNCTSK CAAIRFIIRHTHVPRLIPLITSNCTSKSVP VPRLIPLITSNCTSKSVPVRRRSFEFLDLL R L I S K S 0 0 1 0 1 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 12 0 1345.7275 O75122 O75122 213 224 CLASP2 CLIP-associating protein 2 yes yes 2 0.0030326 115.91 By MS/MS 3.5 0.5 1 1 2 1860200 1860200 0 8648 279 8943 21485;21486 15170 15170 1 48837 0 LIPVLVNGMK EQPICKDVLVRHLPKLIPVLVNGMKYSDID RHLPKLIPVLVNGMKYSDIDIILLKGDVEE K L I M K Y 0 0 1 0 0 0 0 1 0 1 2 1 1 0 1 0 0 0 0 2 0 0 10 0 1082.6522 Q92973 Q92973 308 317 TNPO1 Transportin-1 yes yes 2 0.0026711 111.04 By MS/MS 4.5 0.5 1 1 2 856050 856050 0 8649 2093 8944 21487;21488 15171 15171 1366 1 26205 0 LIQEEKENTEQRAEEIESR MMLQEQLDAINKEIRLIQEEKENTEQRAEE EKENTEQRAEEIESRVGSGSLDNLGRFRSM R L I S R V 1 2 1 0 0 2 7 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 19 2 2330.135 Q13136 Q13136 645 663 PPFIA1 Liprin-alpha-1 yes yes 3 0.0017762 98.035 By MS/MS 3 0 1 1 1227100 1227100 0 8650 1338 8945 21489 15172 15172 1 32033 0 LIQEWNSVDLR GRVNPREGIVLHSTKLIQEWNSVDLRTPLS HSTKLIQEWNSVDLRTPLSDTLHLPVWVDN K L I L R T 0 1 1 1 0 1 1 0 0 1 2 0 0 0 0 1 0 1 0 1 0 0 11 0 1371.7147 Q9Y223 Q9Y223 491 501 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 6.444E-07 184.24 By MS/MS 5.5 0.5 1 1 2 1314400 1314400 0 8651 2862 8946 21490;21491 15173 15173 1 38145 0 LIQNIMK EMEYDHKRISKLSERLIQNIMKSLPDVVMN RISKLSERLIQNIMKSLPDVVMNGDPKHHY R L I M K S 0 0 1 0 0 1 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 7 0 858.49971 Q9Y697 Q9Y697 329 335 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 0.017501 118.01 By MS/MS 7.5 0.5 1 1 2 1807200 1807200 0 8652 2998 8947 21492;21493 15174 15174 1728 1 34366 0 LIQNVFEIK QVGDIFSNPETVLAKLIQNVFEIKLQSFVK ETVLAKLIQNVFEIKLQSFVKEQLEECRKS K L I I K L 0 0 1 0 0 1 1 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1102.6386 O00471 O00471 275 283 EXOC5 Exocyst complex component 5 yes yes 2 0.0020842 134.77 By MS/MS 5 0 1 1 1589400 1589400 0 8653 98 8948 21494 15175 15175 1 65332 0 LIQQEDIK ALYEKGLQNGVPGLRLIQQEDIKKKEPYCR NGVPGLRLIQQEDIKKKEPYCRGLMAIDCP R L I I K K 0 0 0 1 0 2 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 8 0 985.54441 Q9H9P8 Q9H9P8 166 173 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.0038398 145.16 By MS/MS 8.5 1.12 1 1 1 1 4 11397000 11397000 0 8654 2536 8949 21495;21496;21497;21498 15176 15176 1 420820 0 LIQQEDIKK ALYEKGLQNGVPGLRLIQQEDIKKKEPYCR GVPGLRLIQQEDIKKKEPYCRGLMAIDCPH R L I K K K 0 0 0 1 0 2 1 0 0 2 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1113.6394 Q9H9P8 Q9H9P8 166 174 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 0.003348 145.16 By MS/MS 7 0 1 1 494310 494310 0 8655 2536 8950 21499 15177 15177 1 8833.4 0 LIQQQLEK IACNKQDIAMAKSAKLIQQQLEKELNTLRV AMAKSAKLIQQQLEKELNTLRVTRSAAPST K L I E K E 0 0 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 0 998.57605 Q9Y5M8 Q9Y5M8 192 199 SRPRB Signal recognition particle receptor subunit beta yes yes 2 0.00091664 174.16 By MS/MS 9.2 0.748 1 2 2 5 24310000 24310000 0 8656 2976 8951 21500;21501;21502;21503;21504 15178;15179 15178 2 5407500 0 LISEILSESVVPDVR SMKHTATARFQRNHRLISEILSESVVPDVR LISEILSESVVPDVRSVVTTARMQVLKRQV R L I V R S 0 1 0 1 0 0 2 0 0 2 2 0 0 0 1 3 0 0 0 3 0 0 15 0 1654.9142 Q969G3 Q969G3 202 216 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 2 0.00023614 132.17 By MS/MS 6 0 1 1 2216300 2216300 0 8657 2102 8952 21505 15180 15180 1 17283 0 LISGWVSR PLIRSMRTVKRETLKLISGWVSRSNDPQMV VKRETLKLISGWVSRSNDPQMVAENFVPPL K L I S R S 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 2 0 1 0 1 0 0 8 0 916.51305 O14980 O14980 758 765 XPO1 Exportin-1 yes yes 2 0.029378 99.442 By MS/MS 4.5 0.5 1 1 2 2128400 2128400 0 8658 142 8953 21506;21507 15181 15181 1 59803 0 LISQGTIEESMLK RCHRVGQTKEVLVIKLISQGTIEESMLKIN IKLISQGTIEESMLKINQQKLKLEQDMTTV K L I L K I 0 0 0 0 0 1 2 1 0 2 2 1 1 0 0 2 1 0 0 0 0 0 13 0 1447.7592 Q9H4L7 Q9H4L7 977 989 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 5.1086E-05 158.06 By MS/MS 3 0 1 1 1018400 1018400 0 8659 2502 8954 21508 15182 15182 1 26585 0 LISQIVSSITASLR RNLDIERPTYTNLNRLISQIVSSITASLRF RLISQIVSSITASLRFDGALNVDLTEFQTN R L I L R F 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 4 1 0 0 1 0 0 14 0 1486.8719 P68363;Q9H853;Q9BQE3;P68366 P68363 230 243 TUBA1B;TUBA4B;TUBA1C;TUBA4A Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3 4.2424E-47 287.76 By MS/MS 5.8 0.4 1 4 5 41432000 41432000 0 8660 1185;2314;1186 8955 21509;21510;21511;21512;21513 15183;15184;15185;15186;15187;15188;15189;15190;15191 15184 9 323610 0 LISSTESELQQSYAK RCDQATAESNPVTQKLISSTESELQQSYAK LISSTESELQQSYAKQRRSKSAALLHKELN K L I A K Q 1 0 0 0 0 2 2 0 0 1 2 1 0 0 0 4 1 0 1 0 0 0 15 0 1682.8363 O43149 O43149 2567 2581 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 4.1819E-05 138.42 By MS/MS 2 0.816 1 1 1 3 619650 619650 0 8661 182 8956 21514;21515;21516 15192;15193 15192 2 25738 0 LISSVDPQFLK AWAMRAMQHAEVYYKLISSVDPQFLKLTKV VYYKLISSVDPQFLKLTKVDDQIYSEFRKN K L I L K L 0 0 0 1 0 1 0 0 0 1 2 1 0 1 1 2 0 0 0 1 0 0 11 0 1245.6969 Q9BVG4 Q9BVG4 53 63 PBDC1 Protein PBDC1 yes yes 2 0.0028547 140.17 By MS/MS 8 0 1 1 851550 851550 0 8662 2377 8957 21517 15194 15194 1 56176 0 LISTLIYK RFLNWIPLGYIFETKLISTLIYKFLNVPMF GYIFETKLISTLIYKFLNVPMFRNVSLKCL K L I Y K F 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 1 1 0 1 0 0 0 8 0 949.58482 O14980 O14980 246 253 XPO1 Exportin-1 yes yes 2 0.024577 101.33 By MS/MS 4.5 0.5 1 1 2 2088100 2088100 0 8663 142 8958 21518;21519 15195 15195 1 59471 0 LISWYDNEFGYSNR FDAGAGIALNDHFVKLISWYDNEFGYSNRV KLISWYDNEFGYSNRVVDLMAHMASKE___ K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 P04406 P04406 310 323 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 3.1335E-06 174.23 By MS/MS 7.5 0.5 1 1 2 2566700 2566700 0 8664 452 8959 21520;21521 15196 15196 1 54010 0 LITALGSSEVQPQFTR NQNQLHLCVESTALRLITALGSSEVQPQFT ITALGSSEVQPQFTRFLSDPKTVLSAESEE R L I T R F 1 1 0 0 0 2 1 1 0 1 2 0 0 1 1 2 2 0 0 1 0 0 16 0 1745.9312 Q9ULK4 Q9ULK4 652 667 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 2 1.7242E-07 164.64 By MS/MS 3 0 1 1 782540 782540 0 8665 2824 8960 21522 15197 15197 1 20428 0 LITCGTVEEK RVYRIGQKENVVVYRLITCGTVEEKIYRRQ VVVYRLITCGTVEEKIYRRQVFKDSLIRQT R L I E K I 0 0 0 0 1 0 2 1 0 1 1 1 0 0 0 0 2 0 0 1 0 0 10 0 1148.5747 Q2NKX8 Q2NKX8 584 593 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.00031749 152.11 By MS/MS 3.5 0.5 1 1 2 971180 971180 0 8666 1559 8961 21523;21524 15198 15198 1 25707 0 LITDLQDQNQK KQISSLRDEVEAKAKLITDLQDQNQKMMLE AKAKLITDLQDQNQKMMLEQERLRVEHEKL K L I Q K M 0 0 1 2 0 3 0 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1314.6779 P33176 P33176 729 739 KIF5B Kinesin-1 heavy chain yes yes 2 5.4824E-11 233.09 By MS/MS By MS/MS 4.33 0.471 2 1 2 1 4863200 4814700 48521 8667 767 8962 21525;21526;21527 15199;15200 15200 2 134280 101390 LITDNTVEER RAHRIGQKKPVRVFRLITDNTVEERIVERA VRVFRLITDNTVEERIVERAEIKLRLDSIV R L I E R I 0 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 10 0 1188.5986 P28370 P28370 622 631 SMARCA1 Probable global transcription activator SNF2L1 yes yes 2 0.0035184 112.3 By MS/MS 3 0 1 1 785570 785570 0 8668 720 8963 21528 15201 15201 1 20507 0 LITEDVQGK LADLQNDEVAFRKFKLITEDVQGKNCLTNF AFRKFKLITEDVQGKNCLTNFHGMDLTRDK K L I G K N 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1001.5393 P61247 P61247 86 94 RPS3A 40S ribosomal protein S3a yes yes 2 0.0018417 137.13 By MS/MS 7 0.816 1 1 1 3 17354000 17354000 0 8669 1094 8964 21529;21530;21531 15202 15202 1 781600 0 LITEGASKR GIEHVIVDGVVQSIKLITEGASKRIAEFAF VVQSIKLITEGASKRIAEFAFEYARNNHRS K L I K R I 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 9 1 973.55564 P50213 P50213 170 178 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.0078815 129.42 By MS/MS 8 0.816 1 1 1 3 9810600 9810600 0 8670 943 8965 21532;21533;21534 15203;15204 15203 2 348630 0 LITLEEEMTK LEFFGLKKEECPAVRLITLEEEMTKYKPES CPAVRLITLEEEMTKYKPESEELTAERITE R L I T K Y 0 0 0 0 0 0 3 0 0 1 2 1 1 0 0 0 2 0 0 0 0 0 10 0 1205.6213 P07237 P07237 317 326 P4HB Protein disulfide-isomerase yes yes 2 0.0001838 157.34 By MS/MS 6 0 1 1 2786100 2786100 0 8671 487 8966 21535 15205 15205 1 21726 0 LITPLAFALTSDNR PGMEVSFYKILQDPRLITPLAFALTSDNRE RLITPLAFALTSDNREQVQSGLRILLEAAP R L I N R E 2 1 1 1 0 0 0 0 0 1 3 0 0 1 1 1 2 0 0 0 0 0 14 0 1530.8406 Q8TCG1 Q8TCG1 509 522 KIAA1524 Protein CIP2A yes yes 2 0.00021888 138.24 By MS/MS 4 0 1 1 340250 340250 0 8672 1994 8967 21536 15206 15206 1 9288.3 0 LITTQQWLIK PPLLIPTSKYLINNRLITTQQWLIKLTSKQ LINNRLITTQQWLIKLTSKQMMTMHNTKGR R L I I K L 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1242.7336 P00846 P00846 42 51 MT-ATP6 ATP synthase subunit a yes yes 2 0.00053746 155.84 By MS/MS 3.75 3.11 1 1 1 1 4 2621800 2621800 0 8673 433 8968 21537;21538;21539;21540 15207;15208 15207 2 1340500 0 LITYLDQTTQK YLHHVNKRLEEEADRLITYLDQTTQKSLIA EADRLITYLDQTTQKSLIATVEKQLLGEHL R L I Q K S 0 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 3 0 1 0 0 0 11 0 1322.7082 Q13620 Q13620 428 438 CUL4B Cullin-4B yes yes 2 9.2277E-24 233.09 By MS/MS 4.5 0.5 1 1 2 1485200 1485200 0 8674 1390 8969 21541;21542 15209 15209 0 47939 0 LIVAVEQEEIPR EYCQQKGISYKQCGKLIVAVEQEEIPRLQA CGKLIVAVEQEEIPRLQALYEKGLQNGVPG K L I P R L 1 1 0 0 0 1 3 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 12 0 1394.7769 Q9H9P8 Q9H9P8 137 148 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 5.7473E-07 178.54 By MS/MS 6.17 3.44 1 1 1 1 1 1 6 18657000 18657000 0 8675 2536 8970 21543;21544;21545;21546;21547;21548 15210;15211;15212 15211 3 1023000 0 LIVDEAINEDNSVVSLSQPK DLSTAILKQKNRPNRLIVDEAINEDNSVVS AINEDNSVVSLSQPKMDELQLFRGDTVLLK R L I P K M 1 0 2 2 0 1 2 0 0 2 2 1 0 0 1 3 0 0 0 3 0 0 20 0 2169.1165 P55072 P55072 26 45 VCP Transitional endoplasmic reticulum ATPase yes yes 2 4.9558E-50 254.72 By MS/MS 6 2.16 1 1 1 3 3005800 3005800 0 8676 1026 8971 21549;21550;21551 15213;15214 15214 2 346680 0 LIVDHNIADYMTAK MYEKIDLTLLNRLLRLIVDHNIADYMTAKN RLIVDHNIADYMTAKNNVVINYKDMNHTNS R L I A K N 2 0 1 2 0 0 0 0 1 2 1 1 1 0 0 0 1 0 1 1 0 0 14 0 1602.8076 Q6P2Q9 Q6P2Q9 999 1012 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0049703 98.902 By MS/MS 2 0.816 1 1 1 3 710750 710750 0 8677 1706 8972 21552;21553;21554 15215 15215 1223 1 27679 0 LIVDVIR NAEMDARTILLNTKRLIVDVIRFQPGETLT TILLNTKRLIVDVIRFQPGETLTEILETPA R L I I R F 0 1 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 2 0 0 7 0 826.52764 P46940 P46940 1391 1397 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.021851 121.29 By MS/MS 3 0.816 1 1 1 3 498070 498070 0 8678 892 8973 21555;21556;21557 15216 15216 1 15445 0 LIVGTAGR SQPEKVYTLSVSGDRLIVGTAGRRVLVWDL LSVSGDRLIVGTAGRRVLVWDLRNMGYVQQ R L I G R R 1 1 0 0 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 785.47594 O43684 O43684 150 157 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0053384 135.84 By MS/MS 7.5 1.12 1 1 1 1 4 3746700 3746700 0 8679 216 8974 21558;21559;21560;21561 15217;15218 15217 2 181990 0 LIVIGDSTVGK ______________________________ YQFRLIVIGDSTVGKSCLLHRFTQGRFPGL R L I G K S 0 0 0 1 0 0 0 2 0 2 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1100.6441 Q14964;Q96DA2 Q14964 11 21 RAB39A;RAB39B Ras-related protein Rab-39A;Ras-related protein Rab-39B no no 2 4.8239E-05 169.65 By MS/MS 9 0 1 1 3239700 3239700 0 8680 1451;2148 8975 21562 15219 15219 1 1859300 0 LIVNVNDLR YQSKVRELISDNQYRLIVNVNDLRRKNEKR SDNQYRLIVNVNDLRRKNEKRANRLLNNAF R L I L R R 0 1 2 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 9 0 1054.6135 P25205 P25205 47 55 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0016063 134.05 By MS/MS 3.8 1.72 1 1 1 1 1 5 6296800 6296800 0 8681 683 8976 21563;21564;21565;21566;21567 15220;15221 15221 2 160330 0 LIVTQTMK ______________________________ ______________________________ - L I M K G 0 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 2 0 0 1 0 0 8 0 932.53649 CON__P02754 CON__P02754 1 8 yes yes 2 0.021814 98.458 By MS/MS 5 0 1 1 1268600 1268600 0 + 8682 41 8977 21568 15222 15222 25 1 52145 0 LIYTGNMAR VRFLNTPSDKSEDGRLIYTGNMARAVFGVK KSEDGRLIYTGNMARAVFGVKCFSYSTSLI R L I A R A 1 1 1 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 1 0 0 0 9 0 1037.5328 Q9BUB7 Q9BUB7 94 102 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2 0.0044585 112.41 By MS/MS 9.5 0.5 1 1 2 4773500 4773500 0 8683 2361 8978 21569;21570 15223;15224 15224 1473 2 3101100 0 LKAAEEIGIK QVGNRDDSNLYINVKLKAAEEIGIKATHIK YINVKLKAAEEIGIKATHIKLPRTTTESEV K L K I K A 2 0 0 0 0 0 2 1 0 2 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1070.6336 P11586 P11586 57 66 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.00020691 144.77 By MS/MS 4 0 2 2 3588400 3588400 0 8684 556 8979 21571;21572 15225;15226 15226 2 97960 0 LKAQQDKLDK VKRLHNTIVEINNHKLKAQQDKLDKINKQL INNHKLKAQQDKLDKINKQLDECASAITKA K L K D K I 1 0 0 2 0 2 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 10 2 1185.6717 Q9NTJ3 Q9NTJ3 899 908 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.0097712 96.342 By MS/MS 3 0 1 1 235280 235280 0 8685 2630 8980 21573 15227 15227 1 6142.1 0 LKDDEVAQLK CILNARGLTSVINQKLKDDEVAQLKKSADT VINQKLKDDEVAQLKKSADTLWDIQKDLKD K L K L K K 1 0 0 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1157.6292 P07195 P07195 309 318 LDHB L-lactate dehydrogenase B chain yes yes 2;3 0.014605 107.55 By MS/MS 8 0 2 2 2153100 2153100 0 8686 486 8981 21574;21575 15228;15229 15229 2 142040 0 LKDDEVAQLKK CILNARGLTSVINQKLKDDEVAQLKKSADT INQKLKDDEVAQLKKSADTLWDIQKDLKDL K L K K K S 1 0 0 2 0 1 1 0 0 0 2 3 0 0 0 0 0 0 0 1 0 0 11 2 1285.7242 P07195 P07195 309 319 LDHB L-lactate dehydrogenase B chain yes yes 2;3 0.0031518 158.47 By MS/MS By matching 8.6 0.8 3 1 1 4 1 12119000 12093000 26195 8687 486 8982 21576;21577;21578;21579;21580 15230;15231 15230 2 957700 223470 LKDELASTK KLEEENRSLKADLQKLKDELASTKQKLEKA KADLQKLKDELASTKQKLEKAENQVLAMRK K L K T K Q 1 0 0 1 0 0 1 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 9 1 1003.555 P51572 P51572 191 199 BCAP31 B-cell receptor-associated protein 31 yes yes 2;3 0.019687 115.23 By MS/MS By matching 8 0 4 2 2 5123700 5046000 77785 8688 969 8983 21581;21582;21583;21584 15232;15233 15233 2 332880 663600 LKDIDEDFKR HPGLKVATNPSFDGRLKDIDEDFKRELRNL SFDGRLKDIDEDFKRELRNLVPLLLAPENL R L K K R E 0 1 0 3 0 0 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 0 10 2 1277.6616 Q8NHH9 Q8NHH9 313 322 ATL2 Atlastin-2 yes yes 3 0.00046884 161.19 By MS/MS 6 0 1 1 8302200 8302200 0 8689 1975 8984 21585 15234 15234 1 64741 0 LKDIVSLVPR EVTNIITSKELLQTKLKDIVSLVPRLRHII LLQTKLKDIVSLVPRLRHIITVDGKPPTWS K L K P R L 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 1 0 0 0 2 0 0 10 1 1138.7074 O95573 O95573 221 230 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.012715 89.9 By MS/MS 5 0 1 1 778860 778860 0 8690 400 8985 21586 15235 15235 1 32014 0 LKEAELLEPLMPAIR PNEFIRGSTLRFLCKLKEAELLEPLMPAIR LKEAELLEPLMPAIRACLEHRHSYVRRNAV K L K I R A 2 1 0 0 0 0 3 0 0 1 4 1 1 0 2 0 0 0 0 0 0 0 15 1 1721.975 P53618 P53618 127 141 COPB1 Coatomer subunit beta yes yes 2;3 7.7339E-05 158.2 By MS/MS 4.17 0.687 1 3 2 6 6523900 6523900 0 8691 1004 8986;8987 21587;21588;21589;21590;21591;21592 15236;15237;15238;15239 15237 768 4 184000 0 LKEAYSVK SYKHDTKLLILALERLKEAYSVKSRLNQSQ LILALERLKEAYSVKSRLNQSQREELGLIE R L K V K S 1 0 0 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 1 1 0 0 8 1 936.52803 Q6P2Q9 Q6P2Q9 846 853 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 0.0036611 124.08 By MS/MS 2 0.816 1 1 1 3 820170 820170 0 8692 1706 8988 21593;21594;21595 15240 15240 1 39099 0 LKECCDKPLLEK LAKYICDNQDTISSKLKECCDKPLLEKSHC SSKLKECCDKPLLEKSHCIAEVEKDAIPEN K L K E K S 0 0 0 1 2 0 2 0 0 0 3 3 0 0 1 0 0 0 0 0 0 0 12 2 1531.7738 CON__P02769 CON__P02769 298 309 yes yes 3 0.05341 66.004 By MS/MS 6 0.816 1 1 1 3 2256300 2256300 0 + 8693 43 8989 21596;21597;21598 15241 15241 1 25347 0 LKEEASKR RDLTLEENQVKKYHRLKEEASKRAATLAQE QVKKYHRLKEEASKRAATLAQELEKFNRDQ R L K K R A 1 1 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 8 2 959.53999 Q14683 Q14683 378 385 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 0.0085961 172.25 By MS/MS 3.17 1.07 2 2 1 1 6 1445700 1445700 0 8694 1440 8990 21599;21600;21601;21602;21603;21604 15242;15243 15242 2 39260 0 LKEELEEAR QKEMDEAATAEERGRLKEELEEARDIARRR AEERGRLKEELEEARDIARRRSLGNIKFIG R L K A R D 1 1 0 0 0 0 4 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1115.5823 Q04637 Q04637 880 888 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 0.00025665 174.86 By MS/MS 2.2 0.748 1 2 2 5 16615000 16615000 0 8695 1264 8991 21605;21606;21607;21608;21609 15244;15245;15246 15244 3 761610 0 LKEELEEARDIAR QKEMDEAATAEERGRLKEELEEARDIARRR GRLKEELEEARDIARRRSLGNIKFIGELFK R L K A R R 2 2 0 1 0 0 4 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 13 2 1570.8315 Q04637 Q04637 880 892 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3;4 0.018185 119.03 By MS/MS 3.08 1.32 2 2 3 3 2 12 23283000 23283000 0 8696 1264 8992 21610;21611;21612;21613;21614;21615;21616;21617;21618;21619;21620;21621 15247;15248;15249;15250 15249 4 674220 0 LKEGANINK AGSERADSTGAKGTRLKEGANINKSLTTLG GAKGTRLKEGANINKSLTTLGKVISALAEM R L K N K S 1 0 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 9 1 985.55564 Q12756;O43896;O60333 Q12756 265 273 KIF1A;KIF1C;KIF1B Kinesin-like protein KIF1A;Kinesin-like protein KIF1C;Kinesin-like protein KIF1B no no 2 0.0058537 146.79 By MS/MS 2 0.816 1 1 1 3 753470 753470 0 8697 1302;232;245 8993 21622;21623;21624 15251 15251 1 23991 0 LKEHIIGQESAIATVGAAIR KREAEERRRFPLEQRLKEHIIGQESAIATV IGQESAIATVGAAIRRKENGWYDEEHPLVF R L K I R R 4 1 0 0 0 1 2 2 1 4 1 1 0 0 0 1 1 0 0 1 0 0 20 1 2076.1691 Q9H078 Q9H078 343 362 CLPB Caseinolytic peptidase B protein homolog yes yes 3;4 2.3195E-05 121.51 By MS/MS 6 0 2 2 11597000 11597000 0 8698 2448 8994 21625;21626 15252;15253 15253 2 90432 0 LKEIAENQEAK QRQQQQVAEQEKLKRLKEIAENQEAKLKKV KLKRLKEIAENQEAKLKKVRALKGHVEQKR R L K A K L 2 0 1 0 0 1 3 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 Q13625 Q13625 179 189 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 3 0.0040963 85.554 By MS/MS 3.5 0.5 1 1 2 424930 424930 0 8699 1391 8995 21627;21628 15254 15254 1 11162 0 LKEIDSKEEK IATQYSLRPRREEVKLKEIDSKEEKYVAKE REEVKLKEIDSKEEKYVAKELAVRTFEVTP K L K E K Y 0 0 0 1 0 0 3 0 0 1 1 3 0 0 0 1 0 0 0 0 0 0 10 2 1217.6503 Q14739 Q14739 177 186 LBR Lamin-B receptor yes yes 2;3 0.0082815 122.96 By MS/MS 1.5 0.5 2 2 4 673250 673250 0 8700 1445 8996 21629;21630;21631;21632 15255;15256 15256 2 33020 0 LKEIVTNFLAGFEA TIRADGKISEQSDAKLKEIVTNFLAGFEA_ KLKEIVTNFLAGFEA_______________ K L K E A - 2 0 1 0 0 0 2 1 0 1 2 1 0 2 0 0 1 0 0 1 0 0 14 1 1550.8344 P25705 P25705 540 553 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.001129 141.34 By MS/MS 6 0 2 2 6721900 6721900 0 8701 687 8997 21633;21634 15257;15258 15257 2 52418 0 LKELIFEETAR PFKFDMELDDLPKEKLKELIFEETARFQPG PKEKLKELIFEETARFQPGYRS________ K L K A R F 1 1 0 0 0 0 3 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 11 1 1347.7398 P28482 P28482 343 353 MAPK1 Mitogen-activated protein kinase 1 yes yes 3 0.0049496 105.36 By MS/MS 7 0 1 1 1222000 1222000 0 8702 721 8998 21635 15259 15259 1 21838 0 LKELIFQETAR PFTFAMELDDLPKERLKELIFQETARFQPG PKERLKELIFQETARFQPGVLEAP______ R L K A R F 1 1 0 0 0 1 2 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 11 1 1346.7558 P27361 P27361 360 370 MAPK3 Mitogen-activated protein kinase 3 yes yes 3 0.0080109 79.283 By MS/MS 7 0 1 1 655240 655240 0 8703 704 8999 21636 15260 15260 1 11709 0 LKELQGSAAVEK PAGLQYSTDNQFVQRLKELQGSAAVEKIPL VQRLKELQGSAAVEKIPLIPSTPEEMSEML R L K E K I 2 0 0 0 0 1 2 1 0 0 2 2 0 0 0 1 0 0 0 1 0 0 12 1 1271.7085 Q9BV23 Q9BV23 188 199 ABHD6 Monoacylglycerol lipase ABHD6 yes yes 3 0.010764 71.976 By MS/MS 8 0 1 1 354910 354910 0 8704 2370 9000 21637 15261 15261 1 23414 0 LKEQGQAPITPQQGQALAK GTKKDLRAQPDTLRRLKEQGQAPITPQQGQ GQAPITPQQGQALAKQIHAVRYLECSALQQ R L K A K Q 3 0 0 0 0 5 1 2 0 1 2 2 0 0 2 0 1 0 0 0 0 0 19 1 2005.0956 P84095 P84095 129 147 RHOG Rho-related GTP-binding protein RhoG yes yes 3 0.0077474 71.637 By MS/MS 9 0 1 1 1290600 1290600 0 8705 1217 9001 21638 15262 15262 1 740660 0 LKESQTQDNITVR IFGPLVKLEADYDKKLKESQTQDNITVRWD KKLKESQTQDNITVRWDLGLNKKRIAYFTL K L K V R W 0 1 1 1 0 2 1 0 0 1 1 1 0 0 0 1 2 0 0 1 0 0 13 1 1530.8002 Q92900 Q92900 320 332 UPF1 Regulator of nonsense transcripts 1 yes yes 3 0.00078396 117.7 By MS/MS By matching 2.5 0.5 1 1 1 1 974880 959260 15621 8706 2088 9002 21639;21640 15263 15263 1 25041 13151 LKETCVSGEDPTQGADLSPDEK DAEPQEAEPAKELVKLKETCVSGEDPTQGA GEDPTQGADLSPDEKVLSKPPEGVVSEVEM K L K E K V 1 0 0 3 1 1 3 2 0 0 2 2 0 0 2 2 2 0 0 1 0 0 22 1 2375.0798 Q02952 Q02952 466 487 AKAP12 A-kinase anchor protein 12 yes yes 3 0.0012268 78.975 By MS/MS 1 0 1 1 152910 152910 0 8707 1259 9003 21641 15264 15264 1 7470.8 0 LKETIDNNSVSSPLQSLQQR ILMQNWDAAMEDLTRLKETIDNNSVSSPLQ DNNSVSSPLQSLQQRTWLIHWSLFVFFNHP R L K Q R T 0 1 2 1 0 3 1 0 0 1 3 1 0 0 1 4 1 0 0 1 0 0 20 1 2256.171 P60228 P60228 192 211 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 3 2.4763E-08 147.6 By MS/MS 6.5 0.5 1 1 2 13330000 13330000 0 8708 1065 9004 21642;21643 15265;15266 15265 2 113990 0 LKETYEALLAR SLLEKRRQLSRDIGRLKETYEALLARFPNL DIGRLKETYEALLARFPNLRFAYKDPEKNW R L K A R F 2 1 0 0 0 0 2 0 0 0 3 1 0 0 0 0 1 0 1 0 0 0 11 1 1305.7293 O95347 O95347 492 502 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2;3 0.0036041 143.24 By MS/MS 3.33 0.471 2 1 3 3230900 3230900 0 8709 385 9005 21644;21645;21646 15267;15268 15267 2 84535 0 LKEYEAAVEQLK AQMQEQTLQLEQQSKLKEYEAAVEQLKSEQ QSKLKEYEAAVEQLKSEQIRAQAEERRKTL K L K L K S 2 0 0 0 0 1 3 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 12 1 1419.7609 Q5T9A4 Q5T9A4 93 104 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.00050528 161.99 By MS/MS 5.5 0.5 1 1 2 5894200 5894200 0 8710 1634 9006 21647;21648 15269;15270 15270 2 92674 0 LKEYEAAVEQLKSEQIR AQMQEQTLQLEQQSKLKEYEAAVEQLKSEQ EYEAAVEQLKSEQIRAQAEERRKTLSEETR K L K I R A 2 1 0 0 0 2 4 0 0 1 2 2 0 0 0 1 0 0 1 1 0 0 17 2 2033.0793 Q5T9A4 Q5T9A4 93 109 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 4 0.0053417 82.942 By MS/MS 5.5 0.5 1 1 2 5535400 5535400 0 8711 1634 9007 21649;21650 15271 15271 1 94946 0 LKFLNDSEQVAR TPPAPDSPQEPLVLRLKFLNDSEQVARAWP VLRLKFLNDSEQVARAWPHDTIGSLKRTQF R L K A R A 1 1 1 1 0 1 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 12 1 1418.7518 Q9BVT8 Q9BVT8 107 118 TMUB1 Transmembrane and ubiquitin-like domain-containing protein 1 yes yes 2 0.0027182 144.77 By MS/MS 8.5 0.5 1 1 2 527520 527520 0 8712 2384 9008 21651;21652 15272 15272 1 167620 0 LKGDDLQAIKK FNSKSGQRGSSKSGKLKGDDLQAIKKELTQ KSGKLKGDDLQAIKKELTQIKQKVDSLLEN K L K K K E 1 0 0 2 0 1 0 1 0 1 2 3 0 0 0 0 0 0 0 0 0 0 11 2 1227.7187 P07910 P07910 188 198 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2;3 0.0025882 120.57 By MS/MS 7.33 0.471 2 1 3 4778100 4778100 0 8713 495 9009 21653;21654;21655 15273;15274 15273 2 93249 0 LKGSGNLEAIHIIK HKDHFTKLAVEAVLRLKGSGNLEAIHIIKK RLKGSGNLEAIHIIKKLGGSLADSYLDEGF R L K I K K 1 0 1 0 0 0 1 2 1 3 2 2 0 0 0 1 0 0 0 0 0 0 14 1 1491.8773 P78371 P78371 190 203 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 5.6637E-05 145 By MS/MS 6 0 3 3 89697000 89697000 0 8714 1195 9010 21656;21657;21658 15275;15276;15277 15275 3 699460 0 LKGSGNLEAIHIIKK HKDHFTKLAVEAVLRLKGSGNLEAIHIIKK LKGSGNLEAIHIIKKLGGSLADSYLDEGFL R L K K K L 1 0 1 0 0 0 1 2 1 3 2 3 0 0 0 1 0 0 0 0 0 0 15 2 1619.9723 P78371 P78371 190 204 CCT2 T-complex protein 1 subunit beta yes yes 4 0.021544 64.313 By MS/MS 6 0 1 1 3466100 3466100 0 8715 1195 9011 21659 15278 15278 1 27029 0 LKHECGAAFTSK GKSASVDAEKSMLSKLKHECGAAFTSKLEG LSKLKHECGAAFTSKLEGMFKDMELSKDIM K L K S K L 2 0 0 0 1 0 1 1 1 0 1 2 0 1 0 1 1 0 0 0 0 0 12 1 1347.6605 Q13620;Q13619 Q13620 633 644 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 3 0.021165 75.589 By MS/MS 4 0 1 1 703850 703850 0 8716 1390 9012 21660 15279 15279 1 19214 0 LKKPEAVR EQSTFKVLSTKIEIKLKKPEAVRWEKLEGQ STKIEIKLKKPEAVRWEKLEGQGDVPTPKQ K L K V R W 1 1 0 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 0 1 0 0 8 2 939.58655 Q9Y2Z0 Q9Y2Z0 246 253 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 3 0.029388 94.114 By MS/MS 7 0 1 1 2881400 2881400 0 8717 2907 9013 21661 15280 15280 1 51491 0 LKLHCTPGDGQR EERVYTPSNADIGLRLKLHCTPGDGQRFGH GLRLKLHCTPGDGQRFGHSRELESVCVVEA R L K Q R F 0 1 0 1 1 1 0 2 1 0 2 1 0 0 1 0 1 0 0 0 0 0 12 1 1380.6932 Q6L8Q7 Q6L8Q7 246 257 PDE12 2,5-phosphodiesterase 12 yes yes 3 0.025294 87.641 By MS/MS 4.5 0.5 1 1 2 1212400 1212400 0 8718 1687 9014 21662;21663 15281 15281 1 48921 0 LKMPPVLEER LEEATRQAVEAAKVRLKMPPVLEERVPIND AAKVRLKMPPVLEERVPINDVLAEDKILEG R L K E R V 0 1 0 0 0 0 2 0 0 0 2 1 1 0 2 0 0 0 0 1 0 0 10 1 1210.6744 P82650 P82650 126 135 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 0.022688 79.036 By MS/MS 7 0 1 1 533500 533500 0 8719 1201 9015 21664 15282 15282 1 9533.8 0 LKNDNTEAFYK GEPRKAISDLKAASKLKNDNTEAFYKISTL AASKLKNDNTEAFYKISTLYYQLGDHELSL K L K Y K I 1 0 2 1 0 0 1 0 0 0 1 2 0 1 0 0 1 0 1 0 0 0 11 1 1341.6565 Q13217 Q13217 217 227 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 2 0.0028072 163.88 By MS/MS 6 0 1 1 1772300 1772300 0 8720 1348 9016 21665 15283 15283 1 13821 0 LKNITLDDASAPR PKAVAAPRPDRLVNRLKNITLDDASAPRLM NRLKNITLDDASAPRLMVLRQPRGPDNSMG R L K P R L 2 1 1 2 0 0 0 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 13 1 1412.7623 O75534 O75534 757 769 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.001158 108.23 By MS/MS 4.5 0.5 1 1 2 2402100 2402100 0 8721 316 9017 21666;21667 15284 15284 1 89644 0 LKNQVTQLK EILNGKEISAQIRARLKNQVTQLKEQVPGF AQIRARLKNQVTQLKEQVPGFTPRLAILQV R L K L K E 0 0 1 0 0 2 0 0 0 0 2 2 0 0 0 0 1 0 0 1 0 0 9 1 1070.6448 P11586 P11586 20 28 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0076921 141.2 By MS/MS 4 0 1 1 1910000 1910000 0 8722 556 9018 21668 15285 15285 1 52140 0 LKQFVSQELVNL AGHNDVELYGQYLERLKQFVSQELVNL___ LERLKQFVSQELVNL_______________ R L K N L - 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 1 0 0 0 2 0 0 12 1 1416.7977 Q5VST6 Q5VST6 277 288 ABHD17B Alpha/beta hydrolase domain-containing protein 17B yes yes 2 0.0033968 143.5 By MS/MS 8 0 1 1 531450 531450 0 8723 1647 9019 21669 15286 15286 1 35060 0 LKQSLPPGLAVK YLYTLVITDKEKAEKLKQSLPPGLAVKELK AEKLKQSLPPGLAVKELK____________ K L K V K E 1 0 0 0 0 1 0 1 0 0 3 2 0 0 2 1 0 0 0 1 0 0 12 1 1249.7758 P63173 P63173 56 67 RPL38 60S ribosomal protein L38 yes yes 2 0.040188 97.565 By MS/MS 10 0 1 1 354810 354810 0 8724 1173 9020 21670 15287 15287 0 377130 0 LKSQADQFCQR FKEADATKNKEKLEKLKSQADQFCQRLGKY KLEKLKSQADQFCQRLGKYRMPFAWTAIHL K L K Q R L 1 1 0 1 1 3 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 1 1379.6616 Q96N67 Q96N67 380 390 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.044167 67.214 By MS/MS 2.5 0.5 1 1 2 480160 480160 0 8725 2230 9021 21671;21672 15288 15288 1 21926 0 LKTEGSDLCDR EHKALTSEIALLQSRLKTEGSDLCDRVSEM LQSRLKTEGSDLCDRVSEMQKLDAQVKELV R L K D R V 0 1 0 2 1 0 1 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 11 1 1292.6031 P04843 P04843 537 547 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2;3 0.00052062 166.29 By MS/MS By matching 4.75 0.433 1 3 3 1 3976600 3960700 15839 8726 458 9022 21673;21674;21675;21676 15289;15290 15290 2 161980 46867 LKVGLQVVAVK EDVDGEALSTLVLNRLKVGLQVVAVKAPGF VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM R L K V K A 1 0 0 0 0 1 0 1 0 0 2 2 0 0 0 0 0 0 0 4 0 0 11 1 1152.7594 P10809 P10809 291 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.044304 103.55 By MS/MS 6 0 1 1 20977000 20977000 0 8727 544 9023 21677 15291 15291 1 163580 0 LKVPEWVDTVK EFVRALAAFLKKSGKLKVPEWVDTVKLAKH KSGKLKVPEWVDTVKLAKHKELAPYDENWF K L K V K L 0 0 0 1 0 0 1 0 0 0 1 2 0 0 1 0 1 1 0 3 0 0 11 1 1312.7391 P39019 P39019 28 38 RPS19 40S ribosomal protein S19 yes yes 3 0.052709 80.834 By MS/MS 10 0 1 1 445430 445430 0 8728 823 9024 21678 15292 15292 1 473450 0 LKVTEGGEPYR MEHVYGIPEHADNLRLKVTEGGEPYRLYNL DNLRLKVTEGGEPYRLYNLDVFQYELYNPM R L K Y R L 0 1 0 0 0 0 2 2 0 0 1 1 0 0 1 0 1 0 1 1 0 0 11 1 1247.651 Q14697 Q14697 268 278 GANAB Neutral alpha-glucosidase AB yes yes 3 0.010724 96.067 By MS/MS 4 0 1 1 912110 912110 0 8729 1443 9025 21679 15293 15293 1 24900 0 LKYENEVALR LLQIDNARLAADDFRLKYENEVALRQSVEA ADDFRLKYENEVALRQSVEADINGLRRVLD R L K L R Q 1 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 1 1233.6717 CON__P13645;P13645 CON__P13645 236 245 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.0003967 176.6 By MS/MS By MS/MS 5.19 2.89 3 4 3 3 2 1 3 2 11 10 45482000 33701000 11781000 + 8730 49 9026 21680;21681;21682;21683;21684;21685;21686;21687;21688;21689;21690;21691;21692;21693;21694;21695;21696;21697;21698;21699;21700 15294;15295;15296;15297;15298;15299;15300;15301;15302;15303;15304;15305;15306;15307;15308;15309;15310;15311;15312 15312 19 8232900 33318000 LKYSQSDLEQTK ELRQVQSQAHGLQMRLKYSQSDLEQTKTRH QMRLKYSQSDLEQTKTRHLALNLQEKSKLE R L K T K T 0 0 0 1 0 2 1 0 0 0 2 2 0 0 0 2 1 0 1 0 0 0 12 1 1438.7304 Q14683 Q14683 712 723 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 0.0033694 140.63 By MS/MS 3 0 2 2 1524000 1524000 0 8731 1440 9027 21701;21702 15313;15314 15314 2 39785 0 LLAAALK RIRKEKPQQHNFTHRLLAAALKSHSGNISC QQHNFTHRLLAAALKSHSGNISCMDFSSNG R L L L K S 3 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 698.46906 Q9Y4P3 Q9Y4P3 81 87 TBL2 Transducin beta-like protein 2 yes yes 2 0.048568 102.12 By MS/MS 7 0 1 1 2338100 2338100 0 8732 2957 9028 21703 15315 15315 1 41782 0 LLACIASR AKISSLLEEQFQQGKLLACIASRPGQCGRA EQFQQGKLLACIASRPGQCGRADGYVLEGK K L L S R P 2 1 0 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 902.50077 P62241 P62241 171 178 RPS8 40S ribosomal protein S8 yes yes 2 0.008595 123.69 By MS/MS 8.5 0.5 1 1 2 5040600 5040600 0 8733 1118 9029 21704;21705 15316 15316 1 460420 0 LLADELISPK GKLFLWGQALYIIAKLLADELISPKDIDPV YIIAKLLADELISPKDIDPVQRYVPLKDQR K L L P K D 1 0 0 1 0 0 1 0 0 1 3 1 0 0 1 1 0 0 0 0 0 0 10 0 1097.6332 Q93100 Q93100 453 462 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 2 0.031026 89.886 By MS/MS 4 0 1 1 681280 681280 0 8734 2100 9030 21706 15317 15317 1 18598 0 LLADPTGAFGK TGEWGRAHKAEGKVRLLADPTGAFGKETDL GKVRLLADPTGAFGKETDLLLDDSLVSIFG R L L G K E 2 0 0 1 0 0 0 2 0 0 2 1 0 1 1 0 1 0 0 0 0 0 11 0 1088.5866 P30044 P30044 149 159 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.0020488 120.12 By MS/MS By matching 10 0 2 1 1 1817200 1801600 15572 8735 730 9031 21707;21708 15318 15318 1 1914900 399420 LLADQAEAR MEHIHKLKADKARKKLLADQAEARRSKTKE DKARKKLLADQAEARRSKTKEARKRREERL K L L A R R 3 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 985.51926 P84098 P84098 154 162 RPL19 60S ribosomal protein L19 yes yes 2 0.00055753 152.06 By MS/MS By matching 8.33 0.471 2 1 2 1 3754700 3513400 241340 8736 1218 9032 21709;21710;21711 15319 15319 1 295910 2058900 LLADTDDLILENFYDK VNFQDGIDCGGAYIKLLADTDDLILENFYD LADTDDLILENFYDKTSYIIMFGPDKCGED K L L D K T 1 0 1 4 0 0 1 0 0 1 4 1 0 1 0 0 1 0 1 0 0 0 16 0 1896.9357 O14967 O14967 158 173 CLGN Calmegin yes yes 2 1.2508E-06 156 By MS/MS 4 0 1 1 194440 194440 0 8737 139 9033 21712 15320 15320 1 5308 0 LLAEILR KIQEENVIPREKTLRLLAEILREGNQEVPF IPREKTLRLLAEILREGNQEVPFDVPELWY R L L L R E 1 1 0 0 0 0 1 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 7 0 826.52764 P42704 P42704 995 1001 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.016553 135.87 By MS/MS 5 1.41 1 1 1 1 1 5 63717000 63717000 0 8738 854 9034 21713;21714;21715;21716;21717 15321;15322 15321 2 1665200 0 LLAEKVEEIVAK RKAGIKSTIAIEKFKLLAEKVEEIVAKNAR KFKLLAEKVEEIVAKNARAEIDYSDAPDEF K L L A K N 2 0 0 0 0 0 3 0 0 1 2 2 0 0 0 0 0 0 0 2 0 0 12 1 1340.7915 O95155 O95155 1206 1217 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 0.027763 103.21 By MS/MS 3 0 1 1 169990 169990 0 8739 367 9035 21718 15323 15323 0 4437.6 0 LLAEMDSQFDSTTGFLGK SLSIEIGHEVKTQNKLLAEMDSQFDSTTGF EMDSQFDSTTGFLGKTMGKLKILSRGSQTK K L L G K T 1 0 0 2 0 1 1 2 0 0 3 1 1 2 0 2 2 0 0 0 0 0 18 0 1958.9295 O15155 O15155 63 80 BET1 BET1 homolog yes yes 2 2.3995E-14 188.4 By MS/MS 10 0 1 1 444680 444680 0 8740 154 9036 21719 15324 15324 95 1 472640 0 LLAEPVPGIK ______________________________ KETQRLLAEPVPGIKAEPDESNARYFHVVI R L L I K A 1 0 0 0 0 0 1 1 0 1 2 1 0 0 2 0 0 0 0 1 0 0 10 0 1035.6328 P61088;Q5JXB2 P61088 15 24 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 2 0.0055766 105.57 By MS/MS 10 0 1 1 575620 575620 0 8741 1087 9037 21720 15325 15325 1 611820 0 LLAETVAPAVR IVAQVWPFLGQYMEKLLAETVAPAVRGSNP YMEKLLAETVAPAVRGSNPHLQTFTFTRVE K L L V R G 3 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 1 0 0 2 0 0 11 0 1138.671 Q9BSJ8 Q9BSJ8 160 170 ESYT1 Extended synaptotagmin-1 yes yes 2 2.5505E-07 190.73 By MS/MS 3.5 0.5 1 1 2 0 0 0 8742 2339 9038 21721;21722 15326;15327 15326 2 0 0 LLAFAEAR LSVSRWHRRRGVGRRLLAFAEARARAWAGG RRGVGRRLLAFAEARARAWAGGMGEPRARL R L L A R A 3 1 0 0 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 889.50215 Q8WUY8 Q8WUY8 143 150 NAT14 N-acetyltransferase 14 yes yes 2 0.027478 100.19 By MS/MS 9 0 1 1 4854200 4854200 0 8743 2021 9039 21723 15328 15328 1 2785900 0 LLAGATAR LPDCLSAEGELRCRRLLAGATARLRARPAS GELRCRRLLAGATARLRARPASAAVLVPLC R L L A R L 3 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 771.46029 Q8WV74 Q8WV74 17 24 NUDT8 Nucleoside diphosphate-linked moiety X motif 8, mitochondrial yes yes 2 0.037656 96.19 By MS/MS 9 0 1 1 401980 401980 0 8744 2025 9040 21724 15329 15329 1 230700 0 LLAHEIFEK KYFSAKSGVYCGPLKLLAHEIFEKSNAAGV YCGPLKLLAHEIFEKSNAAGVPCDLVTGEE K L L E K S 1 0 0 0 0 0 2 0 1 1 2 1 0 1 0 0 0 0 0 0 0 0 9 0 1098.6073 Q8IYB8 Q8IYB8 235 243 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2;3 0.0012307 138.1 By MS/MS 5 0 2 2 4552000 4552000 0 8745 1879 9041 21725;21726 15330;15331 15330 2 187110 0 LLALEEAAAAPAR WQRAVEPGRPPLSRRLLALEEAAAAPARDG RRLLALEEAAAAPARDGPASEAALQLLCRA R L L A R D 6 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 13 0 1294.7245 Q5TA31 Q5TA31 72 84 RNF187 E3 ubiquitin-protein ligase RNF187 yes yes 2 0.0023806 117.7 By MS/MS 7.5 0.5 1 1 2 753790 753790 0 8746 1635 9042 21727;21728 15332 15332 1 38040 0 LLALGLVAER KNITAKRSRARIVDKLLALGLVAERRELYK RIVDKLLALGLVAERRELYKKRQKKLASSI K L L E R R 2 1 0 0 0 0 1 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 10 0 1053.6546 Q9UNS1 Q9UNS1 931 940 TIMELESS Protein timeless homolog yes yes 2 0.00088136 128.36 By MS/MS 3 0 1 1 206650 206650 0 8747 2846 9043 21729 15333 15333 1 5394.7 0 LLALNSLYSPK FWSHETRLPSNTLDRLLALNSLYSPKIEVH TLDRLLALNSLYSPKIEVHFLSLATNFLLE R L L P K I 1 0 1 0 0 0 0 0 0 0 4 1 0 0 1 2 0 0 1 0 0 0 11 0 1217.702 P78527 P78527 2539 2549 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00050946 142.36 By MS/MS 1.5 0.5 1 1 2 2043100 2043100 0 8748 1197 9044 21730;21731 15334;15335 15334 2 100300 0 LLANMVYQYK ELRNKERISVAAASKLLANMVYQYKGMGLS AAASKLLANMVYQYKGMGLSMGTMICGWDK K L L Y K G 1 0 1 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 2 1 0 0 10 0 1241.6478 P28074 P28074 141 150 PSMB5 Proteasome subunit beta type-5 yes yes 2 1.6451E-10 195.81 By MS/MS 9.5 0.5 1 1 2 3045400 3045400 0 8749 715 9045 21732;21733 15336 15336 492 1 1822100 0 LLAQGLIK CHDQKMVKHREPFHKLLAQGLIKGQTFRLP HREPFHKLLAQGLIKGQTFRLPSGQYLQRE K L L I K G 1 0 0 0 0 1 0 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 8 0 854.55894 Q15031 Q15031 593 600 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.013948 114.59 By MS/MS 4.5 0.5 1 1 2 8388600 8388600 0 8750 1467 9046 21734;21735 15337;15338 15337 2 246750 0 LLAQQLVSPVK NVHAHRYRHPGHIHKLLAQQLVSPVKWEQT HIHKLLAQQLVSPVKWEQTMHAIYERKKGR K L L V K W 1 0 0 0 0 2 0 0 0 0 3 1 0 0 1 1 0 0 0 2 0 0 11 0 1194.7336 Q8IVS2 Q8IVS2 315 325 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 0.00011647 159.34 By MS/MS 7.5 0.5 1 1 2 5087700 5087700 0 8751 1858 9047 21736;21737 15339 15339 1 101470 0 LLAREEEESESSTSDDKR RTACTSVEEFQVFKKLLAREEEESESSTSD REEEESESSTSDDKRASLDEDEDDDDEEDN K L L K R A 1 2 0 2 0 0 5 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 18 2 2079.9556 Q7Z6M4 Q7Z6M4 319 336 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 3 0.00045435 118.52 By MS/MS 7.5 0.5 1 1 2 1334100 1334100 0 8752 1802 9048 21738;21739 15340 15340 1 33856 0 LLASLVK HQYQFLEDAVRNQRKLLASLVKRLGDKHAT DAVRNQRKLLASLVKRLGDKHATLQKSTKE K L L V K R 1 0 0 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 7 0 742.49528 Q13263 Q13263 255 261 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.020544 124.89 By MS/MS 4 0.816 1 1 1 3 5625900 5625900 0 8753 1351 9049 21740;21741;21742 15341 15341 1 164380 0 LLASSPALPSSGAQAR LSDSPLLGPPVGEPRLLASSPALPSSGAQA LASSPALPSSGAQARLTRAPGPPHSAHALP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.030447 88.803 By MS/MS 4.5 0.5 1 1 2 1124400 1124400 0 8754 2702 9050 21743;21744 15342 15342 1 33250 0 LLAVAATAPPDAPNREEVFDER QEVSDVFSDTTTPIKLLAVAATAPPDAPNR APPDAPNREEVFDERAANFENHSGKLGATA K L L E R A 5 2 1 2 0 0 3 0 0 0 2 0 0 1 3 0 1 0 0 2 0 0 22 1 2380.2023 P18206 P18206 608 629 VCL Vinculin yes yes 3 0.012403 60.034 By MS/MS 4.5 0.5 1 1 2 2140100 2140100 0 8755 623 9051 21745;21746 15343 15343 1 62482 0 LLAVTGEQAQQAR LVIIGDRQLSKGTTRLLAVTGEQAQQAREL TRLLAVTGEQAQQARELGQSLAQEVKAATE R L L A R E 3 1 0 0 0 3 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 13 0 1383.747 Q5JTZ9 Q5JTZ9 778 790 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 4.2897E-46 281.41 By MS/MS By MS/MS 5.11 2.51 1 1 2 1 1 1 1 1 8 1 41890000 41801000 88631 8756 1611 9052 21747;21748;21749;21750;21751;21752;21753;21754;21755 15344;15345;15346;15347;15348;15349;15350;15351;15352 15348 8 2332400 185200 LLCDSVVLQPYLR VESKDRKANAHFILKLLCDSVVLQPYLREL LKLLCDSVVLQPYLRELLSAKDARGMTPFM K L L L R E 0 1 0 1 1 1 0 0 0 0 4 0 0 0 1 1 0 0 1 2 0 0 13 0 1574.849 O95071 O95071 1091 1103 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0096603 95.775 By MS/MS 1.5 0.5 1 1 2 182330 182330 0 8757 364 9053 21756;21757 15353;15354 15353 2 9006.6 0 LLCEHFR ANPASPPLSLLVLHRLLCEHFRVLSTVHTH LSLLVLHRLLCEHFRVLSTVHTHSSVKSVP R L L F R V 0 1 0 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 973.48037 Q13155 Q13155 141 147 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 0.040558 107.66 By MS/MS 7.5 0.5 1 1 2 3897900 3897900 0 8758 1342 9054 21758;21759 15355 15355 1 159440 0 LLCGGGIAADR KILGYINTGKQEGAKLLCGGGIAADRGYFI EGAKLLCGGGIAADRGYFIQPTVFGDVQDG K L L D R G 2 1 0 1 1 0 0 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1101.5601 P05091 P05091 384 394 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00012262 152.28 By MS/MS By matching 6.33 0.471 2 1 2 1 12654000 12616000 37846 8759 467 9055 21760;21761;21762 15356 15356 1 106260 116070 LLCGLLAER SIGKIGGAQNRSYSKLLCGLLAERLRISPD NRSYSKLLCGLLAERLRISPDRVYINYYDM K L L E R L 1 1 0 0 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1043.5798 P14174 P14174 79 87 MIF Macrophage migration inhibitory factor yes yes 2 0.0072461 138.54 By MS/MS 10 0 1 1 0 0 0 8760 586 9056 21763 15357 15357 1 0 0 LLCSTGEYDK EDQDTYNVAIRNYGRLLCSTGEYDKAIQAF RNYGRLLCSTGEYDKAIQAFKSTPLEVLED R L L D K A 0 0 0 1 1 0 1 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 10 0 1184.5383 Q6PGP7 Q6PGP7 1029 1038 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00072278 135.71 By MS/MS 3 0 1 1 788220 788220 0 8761 1714 9057 21764 15358 15358 1 20577 0 LLCVFALDR MIQQHQEWLEDLVIRLLCVFALDRFGDFVS EDLVIRLLCVFALDRFGDFVSDEVVAPVRE R L L D R F 1 1 0 1 1 0 0 0 0 0 3 0 0 1 0 0 0 0 0 1 0 0 9 0 1105.5954 O14981 O14981 346 354 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.0098498 105.14 By MS/MS 2.5 0.5 1 1 2 124330 124330 0 8762 143 9058 21765;21766 15359 15359 1 4015.8 0 LLDAVDTYIPVPAR LEGRDPELGLKSVQKLLDAVDTYIPVPARD KLLDAVDTYIPVPARDLEKPFLLPVEAVYS K L L A R D 2 1 0 2 0 0 0 0 0 1 2 0 0 0 2 0 1 0 1 2 0 0 14 0 1541.8453 P49411 P49411 239 252 TUFM Elongation factor Tu, mitochondrial yes yes 2 1.5064E-18 229.82 By MS/MS By MS/MS 5.71 2.25 1 1 1 1 1 1 5 3 13 1 112650000 112610000 39001 8763 918 9059 21767;21768;21769;21770;21771;21772;21773;21774;21775;21776;21777;21778;21779;21780 15360;15361;15362;15363;15364;15365;15366;15367;15368;15369;15370;15371 15367 12 2406400 160110 LLDEAIQAVK ______________________________ DEQEKLLDEAIQAVKVQSFQMKRCLDKNKL K L L V K V 2 0 0 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1098.6285 Q96QK1 Q96QK1 15 24 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0006056 140.83 By MS/MS 5.5 0.5 1 1 2 4531900 4531900 0 8764 2242 9060 21781;21782 15372 15372 1 142100 0 LLDEDEIR LCCYLKRESVELALKLLDEDEIRGYKLHVE SVELALKLLDEDEIRGYKLHVEVAKFQLKG K L L I R G 0 1 0 2 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1001.5029 O43719 O43719 200 207 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.054049 89.752 By MS/MS 4.5 0.5 1 1 2 1484300 1484300 0 8765 218 9061 21783;21784 15373 15373 1 54336 0 LLDEEEATDNDLR ELLQRNREILDESLRLLDEEEATDNDLRAK LRLLDEEEATDNDLRAKFKERWQRTPSNEL R L L L R A 1 1 1 3 0 0 3 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 13 0 1531.7002 Q8WUM4 Q8WUM4 457 469 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 3.3095E-25 272.94 By MS/MS 4 0 1 1 881510 881510 0 8766 2019 9062 21785 15374 15374 1 24064 0 LLDELSPNTAPHK PIKIWTSKQGEGMVKLLDELSPNTAPHKYY VKLLDELSPNTAPHKYYIGFRYVHPLTEEA K L L H K Y 1 0 1 1 0 0 1 0 1 0 3 1 0 0 2 1 1 0 0 0 0 0 13 0 1433.7514 P22830 P22830 146 158 FECH Ferrochelatase, mitochondrial yes yes 2 2.7171E-05 166.86 By MS/MS 7 0 1 1 1388600 1388600 0 8767 663 9063 21786 15375 15375 1 24815 0 LLDELTLEGVAR NLFSQTLSLGSQKERLLDELTLEGVARYMQ KERLLDELTLEGVARYMQSERCRRVICLVG R L L A R Y 1 1 0 1 0 0 2 1 0 0 4 0 0 0 0 0 1 0 0 1 0 0 12 0 1327.7347 Q8IXJ6 Q8IXJ6 58 69 SIRT2 NAD-dependent protein deacetylase sirtuin-2 yes yes 2 1.72E-16 219.72 By MS/MS 7 0 1 1 460210 460210 0 8768 1872 9064 21787 15376 15376 1 8224 0 LLDEVFFSEK NDGVLLAAERRNIHKLLDEVFFSEKIYKLN RNIHKLLDEVFFSEKIYKLNEDMACSVAGI K L L E K I 0 0 0 1 0 0 2 0 0 0 2 1 0 2 0 1 0 0 0 1 0 0 10 0 1225.6231 P25789 P25789 55 64 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.00010844 164.68 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 22479000 22321000 157410 8769 691 9065 21788;21789;21790;21791 15377;15378;15379;15380 15378 4 1828700 1342900 LLDFSYEQYQK TMAAEVLSRRCVLMRLLDFSYEQYQKALRQ VLMRLLDFSYEQYQKALRQSAGAVVIILPR R L L Q K A 0 0 0 1 0 2 1 0 0 0 2 1 0 1 0 1 0 0 2 0 0 0 11 0 1432.6874 Q969V3 Q969V3 89 99 NCLN Nicalin yes yes 2 5.1817E-07 204.34 By MS/MS 5.5 0.5 1 1 2 12817000 12817000 0 8770 2109 9066 21792;21793 15381 15381 1 107540 0 LLDGLEVTAR WTELDTNQHRTHAMRLLDGLEVTAREKRLK THAMRLLDGLEVTAREKRLKVARAILYVAQ R L L A R E 1 1 0 1 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1085.6081 Q5VSL9 Q5VSL9 129 138 STRIP1 Striatin-interacting protein 1 yes yes 2 0.00015166 159.79 By MS/MS 4 0 1 1 1327800 1327800 0 8771 1646 9067 21794 15382 15382 1 36247 0 LLDIEGLYSK QADAINAFGESLQKKLLDIEGLYSKVRSRY SLQKKLLDIEGLYSKVRSRYSFIQALVRRI K L L S K V 0 0 0 1 0 0 1 1 0 1 3 1 0 0 0 1 0 0 1 0 0 0 10 0 1149.6281 Q92621 Q92621 1979 1988 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.011832 98.044 By MS/MS 3 0.816 1 1 1 3 718020 718020 0 8772 2070 9068 21795;21796;21797 15383 15383 1 26847 0 LLDILSYLR FDFGKDIKDDNYSNKLLDILSYLRNNQLYP DNYSNKLLDILSYLRNNQLYPGESFAHSIK K L L L R N 0 1 0 1 0 0 0 0 0 1 4 0 0 0 0 1 0 0 1 0 0 0 9 0 1104.6543 O15091 O15091 301 309 KIAA0391 Mitochondrial ribonuclease P protein 3 yes yes 2 7.5483E-05 172.21 By MS/MS 6 0 1 1 1196600 1196600 0 8773 148 9069 21798 15384 15384 1 9331.4 0 LLDISELDMVGAGR IPPSRTLLRKERGVKLLDISELDMVGAGRE KLLDISELDMVGAGREAKRRRKTLDAEVVE K L L G R E 1 1 0 2 0 0 1 2 0 1 3 0 1 0 0 1 0 0 0 1 0 0 14 0 1487.7654 Q9H3P2 Q9H3P2 256 269 NELFA Negative elongation factor A yes yes 2 8.2129E-18 214.67 By MS/MS 5 0 2 2 428130 428130 0 8774 2490 9070;9071 21799;21800 15385;15386 15386 1516 2 17598 0 LLDIVAR QGSTSKHEFQAETKKLLDIVARSLYSEKEV EFQAETKKLLDIVARSLYSEKEVFIRELIS K L L A R S 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 7 0 798.49634 Q12931 Q12931 97 103 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.040889 107.43 By MS/MS 5 0 1 1 5069800 5069800 0 8775 1316 9072 21801 15387 15387 1 208390 0 LLDKVELMLPEK MSAAGARGLRATYHRLLDKVELMLPEKLRP YHRLLDKVELMLPEKLRPLYNHPAGPRTVF R L L E K L 0 0 0 1 0 0 2 0 0 0 4 2 1 0 1 0 0 0 0 1 0 0 12 1 1426.8105 O95563 O95563 16 27 MPC2 Mitochondrial pyruvate carrier 2 yes yes 2;3 0.01265 157.68 By MS/MS 10 0 2 2 1263500 1263500 0 8776 398 9073 21802;21803 15388;15389 15389 209 2 1343000 0 LLDLELTSR VDGEKYQKGTRVRLRLLDLELTSRFLGATT TRVRLRLLDLELTSRFLGATTDTTVLEANA R L L S R F 0 1 0 1 0 0 1 0 0 0 4 0 0 0 0 1 1 0 0 0 0 0 9 0 1058.5972 Q9Y2Q9 Q9Y2Q9 144 152 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 0.00027285 159.37 By MS/MS 9.5 0.5 1 1 2 15025000 15025000 0 8777 2896 9074 21804;21805 15390;15391 15391 2 9725800 0 LLDLPAAASSEDIER FLSFLHLKEAGALDRLLDLPAAASSEDIER LLDLPAAASSEDIERS______________ R L L E R S 3 1 0 2 0 0 2 0 0 1 3 0 0 0 1 2 0 0 0 0 0 0 15 0 1598.8152 P22466 P22466 108 122 GAL Galanin peptides;Galanin;Galanin message-associated peptide yes yes 2 0.00037952 127.56 By MS/MS 10 0 1 1 209280 209280 0 8778 660 9075 21806 15392 15392 1 222440 0 LLDLVQQSCNYK NPKAYPLADAHLTKKLLDLVQQSCNYKQLR TKKLLDLVQQSCNYKQLRKGANEATKTLNR K L L Y K Q 0 0 1 1 1 2 0 0 0 0 3 1 0 0 0 1 0 0 1 1 0 0 12 0 1479.7392 P55769 P55769 22 33 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 2 1.0165E-23 234.9 By MS/MS 10 0 1 1 659330 659330 0 8779 1034 9076 21807 15393 15393 1 700790 0 LLDMADVAVYGVEVPGTEGR GENVSTTEVEGTLSRLLDMADVAVYGVEVP DVAVYGVEVPGTEGRAGMAAVASPTGNCDL R L L G R A 2 1 0 2 0 0 2 3 0 0 2 0 1 0 1 0 1 0 1 4 0 0 20 0 2090.0354 Q6P1M0 Q6P1M0 528 547 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 1.2256E-05 132.97 By MS/MS 2 0 1 1 189180 189180 0 8780 1701 9077 21808 15394 15394 1218 1 9403.1 0 LLDMDGIIVEK TLSIPITPERTDIARLLDMDGIIVEKQRRL DIARLLDMDGIIVEKQRRLATLLGLQAPPT R L L E K Q 0 0 0 2 0 0 1 1 0 2 2 1 1 0 0 0 0 0 0 1 0 0 11 0 1244.6686 Q14152 Q14152 341 351 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 5.8823E-16 217.66 By MS/MS By MS/MS 3.76 1.35 1 2 4 5 3 2 14 3 48380000 48155000 224940 8781 1409 9078;9079 21809;21810;21811;21812;21813;21814;21815;21816;21817;21818;21819;21820;21821;21822;21823;21824;21825 15395;15396;15397;15398;15399;15400;15401;15402;15403;15404 15401 1086 10 1004300 330880 LLDMGETDLMLAALR AEKIFRSNGVQLLQRLLDMGETDLMLAALR LLDMGETDLMLAALRTLVGICSEHQSRTVA R L L L R T 2 1 0 2 0 0 1 1 0 0 5 0 2 0 0 0 1 0 0 0 0 0 15 0 1660.8528 Q9H3U1 Q9H3U1 203 217 UNC45A Protein unc-45 homolog A yes yes 2 2.3895E-50 276.17 By MS/MS 4 0 2 2 1618500 1618500 0 8782 2493 9080;9081 21826;21827 15405;15406 15405 1518;1519 2 44184 0 LLDSEIK EVLKMSTEEIIQRTRLLDSEIKIMKSEVLR EEIIQRTRLLDSEIKIMKSEVLRVTHELQA R L L I K I 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 7 0 816.45928 P17980 P17980 47 53 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.045203 104.45 By MS/MS 6.5 1.12 1 1 1 1 4 8788100 8788100 0 8783 618 9082 21828;21829;21830;21831 15407 15407 1 92947 0 LLDSITVPVAR MQPAQHGEIIKHMAKLLDSITVPVARASIL HMAKLLDSITVPVARASILWLIGENCERVP K L L A R A 1 1 0 1 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 2 0 0 11 0 1182.6972 O00203 O00203 486 496 AP3B1 AP-3 complex subunit beta-1 yes yes 2 9.3051E-05 162.88 By MS/MS 4 0.816 1 1 1 3 1725300 1725300 0 8784 77 9083 21832;21833;21834 15408 15408 1 50746 0 LLDSWFTSTQEK LAVQVHAWQLYYSKKLLDSWFTSTQEKKHK SKKLLDSWFTSTQEKKHK____________ K L L E K K 0 0 0 1 0 1 1 0 0 0 2 1 0 1 0 2 2 1 0 0 0 0 12 0 1453.7089 Q8N5M9 Q8N5M9 169 180 JAGN1 Protein jagunal homolog 1 yes yes 2 1.0972E-23 233.54 By MS/MS 5 4 1 1 2 638760 638760 0 8785 1924 9084 21835;21836 15409;15410 15410 2 335980 0 LLDTAFDLDVFK PATGNKKTHLTELQRLLDTAFDLDVFKNFS LQRLLDTAFDLDVFKNFS____________ R L L F K N 1 0 0 3 0 0 0 0 0 0 3 1 0 2 0 0 1 0 0 1 0 0 12 0 1395.7286 Q02218 Q02218 1009 1020 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 2 0.01137 95.483 By MS/MS 4 0 1 1 48963 48963 0 8786 1251 9085 21837 15411 15411 1 1336.6 0 LLDTNPEINQSDSQDSR LFYVTAFDRDRAMQRLLDTNPEINQSDSQD DTNPEINQSDSQDSRVAPRLDRKKRTVNRE R L L S R V 0 1 2 3 0 2 1 0 0 1 2 0 0 0 1 3 1 0 0 0 0 0 17 0 1930.8868 Q14669 Q14669 1565 1581 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 1.8005E-18 244 By MS/MS 2.5 0.5 1 1 2 1237000 1237000 0 8787 1437 9086 21838;21839 15412;15413 15412 2 44937 0 LLDVDNR SYMLPPLFLEPGDLRLLDVDNRVVLPIEAP FLEPGDLRLLDVDNRVVLPIEAPIRMMITS R L L N R V 0 1 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 843.44503 P00403 P00403 135 141 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 0.027209 116.88 By MS/MS 9.5 0.5 1 1 2 6307500 6307500 0 8788 428 9087 21840;21841 15414 15414 1 3714400 0 LLDVTGGLGTDELR LPLAVASTADLIRCKLLDVTGGLGTDELRL KLLDVTGGLGTDELRLLYGMALVRFVNLIS K L L L R L 0 1 0 2 0 0 1 3 0 0 4 0 0 0 0 0 2 0 0 1 0 0 14 0 1457.7726 Q9Y4W2 Q9Y4W2 99 112 LAS1L Ribosomal biogenesis protein LAS1L yes yes 2 3.4193E-12 205.07 By MS/MS 4 0 1 1 440360 440360 0 8789 2959 9088 21842 15415 15415 1 12021 0 LLDVVHPAAK RGKATISNDGATILKLLDVVHPAAKTLVDI ATILKLLDVVHPAAKTLVDIAKSQDAEVGD K L L A K T 2 0 0 1 0 0 0 0 1 0 2 1 0 0 1 0 0 0 0 2 0 0 10 0 1061.6233 Q99832 Q99832 68 77 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.001831 117.81 By MS/MS By matching 6.79 2.57 1 1 4 2 2 2 2 12 2 308420000 308280000 142020 8790 2295 9089 21843;21844;21845;21846;21847;21848;21849;21850;21851;21852;21853;21854;21855;21856 15416;15417;15418;15419 15417 4 3674500 435570 LLDWLVDR MEDHQHVPIDIQTSKLLDWLVDRRHCSLKW IDIQTSKLLDWLVDRRHCSLKWQSLVLTIR K L L D R R 0 1 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 1 0 1 0 0 8 0 1028.5655 Q96JB5 Q96JB5 16 23 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.012053 117.04 By MS/MS 5 0 1 1 117490 117490 0 8791 2206 9090 21857 15420 15420 1 4829.2 0 LLDYVATVEDEAAAAK LDIPMISWVVMLVSRLLDYVATVEDEAAAA LDYVATVEDEAAAAKKPLNGNQWSFINNNL R L L A K K 5 0 0 2 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 2 0 0 16 0 1677.8461 Q9NR09 Q9NR09 2178 2193 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.012894 110.31 By MS/MS 3 1.41 1 1 1 1 1 5 2162200 2162200 0 8792 2596 9091 21858;21859;21860;21861;21862 15421;15422;15423 15422 3 66565 0 LLDYVPIGPR YKSQLSCVVVDDIERLLDYVPIGPRFSNLV DDIERLLDYVPIGPRFSNLVLQALLVLLKK R L L P R F 0 1 0 1 0 0 0 1 0 1 2 0 0 0 2 0 0 0 1 1 0 0 10 0 1141.6495 P46459 P46459 608 617 NSF Vesicle-fusing ATPase yes yes 2 0.003625 111.95 By MS/MS 7 1.41 1 1 1 1 1 5 10965000 10965000 0 8793 881 9092 21863;21864;21865;21866;21867 15424;15425 15425 2 537300 0 LLEAFHNQGPVIK KKHQRTLMPEKLSHKLLEAFHNQGPVIKRK HKLLEAFHNQGPVIKRKHDLHKMAEANRAL K L L I K R 1 0 1 0 0 1 1 1 1 1 2 1 0 1 1 0 0 0 0 1 0 0 13 0 1464.8089 Q9Y2R9 Q9Y2R9 209 221 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 1.9589E-05 169.65 By MS/MS 8 0 1 1 4453500 4453500 0 8794 2899 9093 21868 15426;15427 15426 2 293800 0 LLEAFTER LEAFRLPGEAPVIQRLLEAFTERWMNCNGS EAPVIQRLLEAFTERWMNCNGSPFANSDAC R L L E R W 1 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 977.5182 Q92538 Q92538 801 808 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.019809 107.01 By MS/MS 3 0 1 1 813420 813420 0 8795 2055 9094 21869 15428 15428 1 21234 0 LLEAGKPFIK TQLEAARLLTYNAARLLEAGKPFIKEASMA YNAARLLEAGKPFIKEASMAKYYASEIAGQ R L L I K E 1 0 0 0 0 0 1 1 0 1 2 2 0 1 1 0 0 0 0 0 0 0 10 1 1114.675 P45954 P45954 356 365 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 3 0.020823 79.986 By MS/MS 7 0 1 1 2353700 2353700 0 8796 871 9095 21870 15429 15429 1 42061 0 LLEAQIATGGIIDPK QAMNKELIEKGHGIRLLEAQIATGGIIDPK LLEAQIATGGIIDPKESHRLPVDIAYKRGY R L L P K E 2 0 0 1 0 1 1 2 0 3 2 1 0 0 1 0 1 0 0 0 0 0 15 0 1537.8716 P15924 P15924 2367 2381 DSP Desmoplakin yes yes 2 3.373E-06 155.09 By MS/MS By MS/MS 5.3 3.03 1 2 1 1 1 1 1 1 1 3 7 940550 540560 399980 8797 603 9096 21871;21872;21873;21874;21875;21876;21877;21878;21879;21880 15430;15431;15432;15433;15434;15435;15436;15437;15438 15437 9 161330 1050200 LLEATAKPEPEEK TGATDARPRRRKPARLLEATAKPEPEEKSR ARLLEATAKPEPEEKSRAKRQKDFDIAEQN R L L E K S 2 0 0 0 0 0 4 0 0 0 2 2 0 0 2 0 1 0 0 0 0 0 13 1 1453.7664 Q96KC8 Q96KC8 450 462 DNAJC1 DnaJ homolog subfamily C member 1 yes yes 3 0.0019996 106.79 By MS/MS 6 0 1 1 2274300 2274300 0 8798 2219 9097 21881 15439 15439 1 17735 0 LLEDKNGEVQNLAVK LDDDSERKVVKMILKLLEDKNGEVQNLAVK LLEDKNGEVQNLAVKCLGPLVSKVKEYQVE K L L V K C 1 0 2 1 0 1 2 1 0 0 3 2 0 0 0 0 0 0 0 2 0 0 15 1 1668.9046 O75155;Q86VP6 Q86VP6 56 70 CAND2;CAND1 Cullin-associated NEDD8-dissociated protein 2;Cullin-associated NEDD8-dissociated protein 1 no no 2 3.1296E-37 253.42 By MS/MS 3 0 1 1 615310 615310 0 8799 1829;286 9098 21882 15440 15440 1 16063 0 LLEDLMDELLEAR LSAVSSVLLSLPAARLLEDLMDELLEARSW ARLLEDLMDELLEARSWLADVAEKDPDEDC R L L A R S 1 1 0 2 0 0 3 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 13 0 1558.7913 Q9Y4R8 Q9Y4R8 786 798 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 1.2573E-25 243.91 By MS/MS 4 0 2 2 536530 536530 0 8800 2958 9099 21883;21884 15441;15442 15441 1708 1 14647 0 LLEEALLR SAGCLASLQQPVGIRLLEEALLRLLPAELP QQPVGIRLLEEALLRLLPAELPAKRVRGKA R L L L R L 1 1 0 0 0 0 2 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 955.57023 P78527 P78527 2892 2899 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0049803 137.18 By MS/MS 3 1.41 1 1 1 1 1 5 17017000 17017000 0 8801 1197 9100 21885;21886;21887;21888;21889 15443;15444;15445;15446;15447 15446 5 739300 0 LLEEAQLQDLEK KKIFNSDELIHFRLRLLEEAQLQDLEKALV RLRLLEEAQLQDLEKALVLANPEVSLWRKQ R L L E K A 1 0 0 1 0 2 3 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 12 0 1427.7508 Q9NU22 Q9NU22 222 233 MDN1 Midasin yes yes 2 5.6881E-24 242.45 By MS/MS 2.5 1.12 1 1 1 1 4 2723100 2723100 0 8802 2635 9101 21890;21891;21892;21893 15448;15449;15450 15448 3 101110 0 LLEEGVLR IQEAQVELQKASEERLLEEGVLRQIPVVGS QKASEERLLEEGVLRQIPVVGSVLNWFSPV R L L L R Q 0 1 0 0 0 0 2 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 927.53893 Q6P996 Q6P996 632 639 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 0.019122 107.9 By MS/MS By matching 5.83 2.11 2 2 1 1 5 1 4873200 4588200 284990 8803 1712 9102 21894;21895;21896;21897;21898;21899 15451;15452 15452 2 257790 595510 LLEEHAK AMRKQSEGLTKEYDRLLEEHAKLQAAVDGP GLTKEYDRLLEEHAKLQAAVDGPMDKKEE_ R L L A K L 1 0 0 0 0 0 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 838.45487 P51572 P51572 226 232 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.035671 111.04 By MS/MS By matching 8.33 0.471 2 1 2 1 3848800 3796000 52866 8804 969 9103 21900;21901;21902 15453 15453 1 272610 451010 LLEEKDPVPLFK EWVGLTLEEAIEKQRLLEEKDPVPLFKIYV KQRLLEEKDPVPLFKIYVAELIQQLQQQAL R L L F K I 0 0 0 1 0 0 2 0 0 0 3 2 0 1 2 0 0 0 0 1 0 0 12 1 1426.8072 Q13084 Q13084 217 228 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2;3 0.0036057 139.15 By MS/MS 8 0 2 2 5274300 5274300 0 8805 1331 9104 21903;21904 15454;15455 15455 2 347950 0 LLEELEEGQK AATTGSGVKVPRNFRLLEELEEGQKGVGDG PRNFRLLEELEEGQKGVGDGTVSWGLEDDE R L L Q K G 0 0 0 0 0 1 4 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1186.6081 Q13404;Q15819 Q13404 17 26 UBE2V1;UBE2V2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 2 4.551E-07 189.82 By MS/MS 10 0 1 1 518390 518390 0 8806 1363;1525 9105 21905 15456 15456 1 550990 0 LLEENVSAFK EANVLATAPDKKKQKLLEENVSAFKTEYDA KKKQKLLEENVSAFKTEYDAVAEKAGKVEA K L L F K T 1 0 1 0 0 0 2 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 0 1148.6077 Q9NTJ3 Q9NTJ3 858 867 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.00064141 139.43 By MS/MS 3 0 1 1 1722200 1722200 0 8807 2630 9106 21906 15457 15457 1 44957 0 LLEENVSAFKTEYDAVAEK EANVLATAPDKKKQKLLEENVSAFKTEYDA NVSAFKTEYDAVAEKAGKVEAEVKRLHNTI K L L E K A 3 0 1 1 0 0 4 0 0 0 2 2 0 1 0 1 1 0 1 2 0 0 19 1 2155.0685 Q9NTJ3 Q9NTJ3 858 876 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.0087324 69.612 By MS/MS 3 0 1 1 857400 857400 0 8808 2630 9107 21907 15458 15458 1 22383 0 LLEFELAQLTK KQMKQEINTLLEAKRLLEFELAQLTKQYRG EAKRLLEFELAQLTKQYRGNEGQMRELQDQ R L L T K Q 1 0 0 0 0 1 2 0 0 0 4 1 0 1 0 0 1 0 0 0 0 0 11 0 1303.7388 Q13464 Q13464 820 830 ROCK1 Rho-associated protein kinase 1 yes yes 2 0.00082271 136.02 By MS/MS 3 0 1 1 216380 216380 0 8809 1373 9108 21908 15459 15459 1 5648.6 0 LLEGCLVGGR GTCKDREILRHDPHKLLEGCLVGGRAMGAR HDPHKLLEGCLVGGRAMGARAAYIYIRGEF K L L G R A 0 1 0 0 1 0 1 3 0 0 3 0 0 0 0 0 0 0 0 1 0 0 10 0 1072.5699 P49821 P49821 138 147 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 0.0052354 106.68 By MS/MS 7 0 1 1 1112700 1112700 0 8810 936 9109 21909 15460 15460 1 19884 0 LLEGEDAHLSSQQASGQSYSSR DVKTRLEQEIATYRRLLEGEDAHLSSQQAS HLSSQQASGQSYSSREVFTSSSSSSSRQTR R L L S R E 2 1 0 1 0 3 2 2 1 0 3 0 0 0 0 6 0 0 1 0 0 0 22 0 2349.0833 CON__P08779;P08779 CON__P08779 420 441 KRT16 Keratin, type I cytoskeletal 16 yes no 3 0.00032516 84.324 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 447940 0 447940 + 8811 47 9110 21910;21911;21912;21913;21914;21915 15461;15462 15462 2 0 851120 LLEGEDAHLSSSQFSSGSQSSR DVKTRLEQEIATYRRLLEGEDAHLSSSQFS HLSSSQFSSGSQSSRDVTSSSRQIRTKVMD R L L S R D 1 1 0 1 0 2 2 2 1 0 3 0 0 1 0 8 0 0 0 0 0 0 22 0 2308.0567 CON__P02533;P02533;CON__Q61782 CON__P02533 418 439 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 5.5365E-05 115.8 By MS/MS By MS/MS 5.12 2.71 1 2 1 2 1 1 3 5 4480500 2202000 2278600 + 8812 35 9111 21916;21917;21918;21919;21920;21921;21922;21923 15463;15464;15465;15466 15464 4 879230 3337300 LLEGEECR NVKLALDVEIATYRKLLEGEECRMSGDLSS EIATYRKLLEGEECRMSGDLSSNVTVSVTS K L L C R M 0 1 0 0 1 0 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1004.4597 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;P12036;CON__P02538;P02538;CON__O95678;O95678;CON__P07744;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647;CON__Q7RTS7;CON__Q32MB2;Q7RTS7;Q86Y46;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__P35908v2 483 490 KRT2;NEFH;KRT6A;KRT75;KRT6C;KRT6B;KRT5;KRT74;KRT73;KRT78 Keratin, type II cytoskeletal 2 epidermal;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78 no no 2 0.0020118 157.33 By MS/MS By MS/MS 4.45 2.84 2 1 2 1 2 1 1 1 5 6 4689100 2692800 1996300 + 8813 52;50;36;53;449;61;57;62 9112 21924;21925;21926;21927;21928;21929;21930;21931;21932;21933;21934 15467;15468;15469;15470;15471;15472;15473;15474 15469 8 254690 7530400 LLEGIGLENLDSPAATK VAQALKADLVPYLLKLLEGIGLENLDSPAA EGIGLENLDSPAATKAQIVKALKAMTRSLQ K L L T K A 2 0 1 1 0 0 2 2 0 1 4 1 0 0 1 1 1 0 0 0 0 0 17 0 1739.9305 O75165 O75165 2140 2156 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 1.9621E-33 243.49 By MS/MS 2.5 0.5 1 1 2 678600 678600 0 8814 287 9113 21935;21936 15475 15475 1 29404 0 LLEGTIVNVPEK LRDVGGEGVQQGLLKLLEGTIVNVPEKNSR LLKLLEGTIVNVPEKNSRKLRGETVQVDTT K L L E K N 0 0 1 0 0 0 2 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 12 0 1310.7446 O76031 O76031 387 398 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 1.9293E-16 218.07 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 8932400 8902100 30216 8815 344 9114 21937;21938;21939;21940;21941 15476;15477;15478 15477 3 250970 92671 LLEHKEIDGR MADPRDKALQDYRKKLLEHKEIDGRLKELR DYRKKLLEHKEIDGRLKELREQLKELTKQY K L L G R L 0 1 0 1 0 0 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 10 1 1208.6513 P62333 P62333 16 25 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.006929 125.74 By MS/MS 7 0 1 1 1135500 1135500 0 8816 1133 9115 21942 15479 15479 1 20291 0 LLEIEPGKR SPACDPTVGVDFFSRLLEIEPGKRIKLQLW VDFFSRLLEIEPGKRIKLQLWDTAGQERFR R L L K R I 0 1 0 0 0 0 2 1 0 1 2 1 0 0 1 0 0 0 0 0 0 0 9 1 1053.6182 Q14964 Q14964 53 61 RAB39A Ras-related protein Rab-39A yes yes 2 0.01122 104.06 By MS/MS 9 0 1 1 1362900 1362900 0 8817 1451 9116 21943 15480 15480 1 782190 0 LLEIVSYK KKAVELGEKASGKLRLLEIVSYKIIGVHQE KASGKLRLLEIVSYKIIGVHQEDELLECLS R L L Y K I 0 0 0 0 0 0 1 0 0 1 2 1 0 0 0 1 0 0 1 1 0 0 8 0 963.56408 Q93009 Q93009 941 948 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 2 0.016288 114.28 By MS/MS 3 0 1 1 0 0 0 8818 2097 9117 21944 15481 15481 1 0 0 LLELADIDPTLRPR RMLFPEAQRLESTGRLLELADIDPTLRPRQ RLLELADIDPTLRPRQLSISHFKSLCDVYR R L L P R Q 1 2 0 2 0 0 1 0 0 1 4 0 0 0 2 0 1 0 0 0 0 0 14 1 1620.9199 Q8WVM0 Q8WVM0 280 293 TFB1M Dimethyladenosine transferase 1, mitochondrial yes yes 2;3 0.013795 128.81 By MS/MS 7.5 0.5 2 2 4 2443400 2443400 0 8819 2032 9118 21945;21946;21947;21948 15482;15483;15484 15482 3 76584 0 LLELALQQYPR RARSAEEPWTQNQQKLLELALQQYPRGSSD NQQKLLELALQQYPRGSSDRWDKIARCVPS K L L P R G 1 1 0 0 0 2 1 0 0 0 4 0 0 0 1 0 0 0 1 0 0 0 11 0 1342.7609 Q96KC8 Q96KC8 504 514 DNAJC1 DnaJ homolog subfamily C member 1 yes yes 2 1.3486E-10 199.46 By MS/MS 6 0 1 1 1737100 1737100 0 8820 2219 9119 21949 15485 15485 1 13546 0 LLELEQDASSAK LNMDLDRASLDLMIRLLELEQDASSAKLLN MIRLLELEQDASSAKLLNEKDMNKIKEKIR R L L A K L 2 0 0 1 0 1 2 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 12 0 1302.6667 Q7Z5K2 Q7Z5K2 747 758 WAPAL Wings apart-like protein homolog yes yes 2 3.2366E-07 185.99 By MS/MS 3.5 0.5 1 1 2 2171900 2171900 0 8821 1800 9120 21950;21951 15486 15486 1 57229 0 LLELFPVNR NSVTSSLRKANLDKRLLELFPVNRQSVDHF ANLDKRLLELFPVNRQSVDHFAKYFTDAGL R L L N R Q 0 1 1 0 0 0 1 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 9 0 1099.639 Q9Y6E2 Q9Y6E2 216 224 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 2 0.0065163 112.41 By MS/MS 7.5 0.5 1 1 2 1024300 1024300 0 8822 3004 9121 21952;21953 15487 15487 1 21147 0 LLELGPKPEVAQQTR FKLKNFKTAATFARRLLELGPKPEVAQQTR LLELGPKPEVAQQTRKILSACEKNPTDAYQ R L L T R K 1 1 0 0 0 2 2 1 0 0 3 1 0 0 2 0 1 0 0 1 0 0 15 1 1677.9414 P53621 P53621 1128 1142 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.00013081 140.33 By MS/MS 4.8 2.52 1 1 2 1 1 1 1 1 1 10 15896000 15896000 0 8823 1005 9122 21954;21955;21956;21957;21958;21959;21960;21961;21962;21963 15488;15489;15490;15491 15489 4 502230 0 LLELQELVLR YISRLAQDKEEMKVKLLELQELVLRLVGDR EMKVKLLELQELVLRLVGDRNEWHGRFLAA K L L L R L 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 0 0 1 0 0 10 0 1224.7442 Q08379 Q08379 882 891 GOLGA2 Golgin subfamily A member 2 yes yes 2 0.0016499 118.4 By MS/MS 3.5 0.5 1 1 2 582640 582640 0 8824 1288 9123 21964;21965 15492;15493 15492 2 15354 0 LLELTGTIDK IVAHVDHGKSTLADRLLELTGTIDKTKNNK TLADRLLELTGTIDKTKNNKQVLDKLQVER R L L D K T 0 0 0 1 0 0 1 1 0 1 3 1 0 0 0 0 2 0 0 0 0 0 10 0 1101.6281 Q8N442 Q8N442 88 97 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.00016756 157.99 By MS/MS 5 0 1 1 1237500 1237500 0 8825 1913 9124 21966 15494 15494 1 50866 0 LLENISPADVGGMEETR WESCFNKVLFPLLTKLLENISPADVGGMEE ENISPADVGGMEETRMRASTLLSKVFLQHL K L L T R M 1 1 1 1 0 0 3 2 0 1 2 0 1 0 1 1 1 0 0 1 0 0 17 0 1829.8829 Q92538 Q92538 1600 1616 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 1.2716E-10 164.93 By MS/MS 2 0 2 2 1231400 1231400 0 8826 2055 9125;9126 21967;21968 15495;15496 15495 1335 2 61206 0 LLEPFEVR TVLAASCARHRRSLRLLEPFEVRTRLLGWD RHRRSLRLLEPFEVRTRLLGWDDRAFYLEA R L L V R T 0 1 0 0 0 0 2 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 8 0 1001.5546 Q8WUY1 Q8WUY1 113 120 THEM6 Protein THEM6 yes yes 2 0.042463 94.302 By MS/MS 9 0.816 1 1 1 3 6009200 6009200 0 8827 2020 9127 21969;21970;21971 15497 15497 1 3418900 0 LLEPVLLLGK GRPLEMIEPRTLQYKLLEPVLLLGKERFAG TLQYKLLEPVLLLGKERFAGVDIRVRVKGG K L L G K E 0 0 0 0 0 0 1 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 10 0 1093.7111 P62249 P62249 51 60 RPS16 40S ribosomal protein S16 yes yes 2 0.00036125 150.4 By MS/MS By matching 10 0 2 1 1 11572000 11510000 61480 8828 1120 9128 21972;21973 15498;15499 15498 2 12234000 1576900 LLEPVLLLGKER GRPLEMIEPRTLQYKLLEPVLLLGKERFAG QYKLLEPVLLLGKERFAGVDIRVRVKGGGH K L L E R F 0 1 0 0 0 0 2 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 12 1 1378.8548 P62249 P62249 51 62 RPS16 40S ribosomal protein S16 yes yes 2;3 0.036844 107.18 By MS/MS 10 0 2 2 3226400 3226400 0 8829 1120 9129 21974;21975 15500;15501 15500 2 3429300 0 LLEQALVIEEQLR NFLEIKNKFLARRFKLLEQALVIEEQLRRA FKLLEQALVIEEQLRRAAYLNMSEDPSHPS K L L L R R 1 1 0 0 0 2 3 0 0 1 4 0 0 0 0 0 0 0 0 1 0 0 13 0 1552.8825 Q14839;Q8TDI0;Q12873 Q14839 1788 1800 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.026384 80.312 By MS/MS 2 0 1 1 73753 73753 0 8830 1449 9130 21976 15502 15502 1 3665.9 0 LLEQGLR RLLRASGRTPEAVQKLLEQGLRHSQDLAFL RTPEAVQKLLEQGLRHSQDLAFLSMLNDIA K L L L R H 0 1 0 0 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 827.4865 P49327 P49327 437 443 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.012279 147.69 By MS/MS By matching 2.67 1.49 2 1 1 1 1 5 1 31951000 31906000 44485 8831 915 9131 21977;21978;21979;21980;21981;21982 15503;15504;15505;15506 15503 4 1251000 44485 LLEQILVAENR LLQAPELETRVQAARLLEQILVAENRDRVA QAARLLEQILVAENRDRVARIGLGVILNLA R L L N R D 1 1 1 0 0 1 2 0 0 1 3 0 0 0 0 0 0 0 0 1 0 0 11 0 1296.7402 Q6SZW1 Q6SZW1 147 157 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.0018361 141.08 By MS/MS 5 0 1 1 595140 595140 0 8832 1725 9132 21983 15507 15507 1 24463 0 LLEQYKEESKK DEITYVELQKEEAQKLLEQYKEESKKALPP EAQKLLEQYKEESKKALPPEKKQNTGSKKS K L L K K A 0 0 0 0 0 1 3 0 0 0 2 3 0 0 0 1 0 0 1 0 0 0 11 2 1393.7453 Q00839 Q00839 665 675 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 0.040806 91.469 By MS/MS By matching 4.33 0.471 2 1 2 1 1248900 1184300 64551 8833 1238 9133 21984;21985;21986 15508 15508 1 33651 134880 LLESGFDPNIR LLQACIDGDFNYSKRLLESGFDPNIRDSRG YSKRLLESGFDPNIRDSRGRTGLHLAAARG R L L I R D 0 1 1 1 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 11 0 1259.651 Q86W74 Q86W74 31 41 ANKRD46 Ankyrin repeat domain-containing protein 46 yes yes 2 0.031507 98.044 By MS/MS 9 0 1 1 548260 548260 0 8834 1835 9134 21987 15509 15509 1 314650 0 LLESLDQLELR GRFCRSSSMADRSSRLLESLDQLELRVEAL RSSRLLESLDQLELRVEALREAATAVEQEK R L L L R V 0 1 0 1 0 1 2 0 0 0 5 0 0 0 0 1 0 0 0 0 0 0 11 0 1327.7347 O95816 O95816 28 38 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 4.3994E-23 250.92 By MS/MS 8.5 0.5 1 1 2 1608200 1608200 0 8835 408 9135 21988;21989 15510;15511 15510 2 587110 0 LLESLEEQEVK LVLAKRRGVNKDVIRLLESLEEQEVKGFNR DVIRLLESLEEQEVKGFNRGTHSKLETMQT R L L V K G 0 0 0 0 0 1 4 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1315.6871 Q86W74 Q86W74 127 137 ANKRD46 Ankyrin repeat domain-containing protein 46 yes yes 2 3.9732E-75 355.82 By MS/MS 9 0.816 1 1 1 3 2411200 2411200 0 8836 1835 9136 21990;21991;21992 15512 15512 1 903850 0 LLESLEEQEVKGFNR LVLAKRRGVNKDVIRLLESLEEQEVKGFNR LLESLEEQEVKGFNRGTHSKLETMQTAESE R L L N R G 0 1 1 0 0 1 4 1 0 0 3 1 0 1 0 1 0 0 0 1 0 0 15 1 1789.921 Q86W74 Q86W74 127 141 ANKRD46 Ankyrin repeat domain-containing protein 46 yes yes 3 0.028067 63.16 By MS/MS 8.5 0.5 1 1 2 778850 778850 0 8837 1835 9137 21993;21994 15513 15513 1 210990 0 LLESMIPIK LRPYFDVEPAQVRSRLLESMIPIKMVNFPQ AQVRSRLLESMIPIKMVNFPQKIAGELYGP R L L I K M 0 0 0 0 0 0 1 0 0 2 2 1 1 0 1 1 0 0 0 0 0 0 9 0 1042.6097 Q9GZM5 Q9GZM5 133 141 YIPF3 Protein YIPF3;Protein YIPF3, 36 kDa form III yes yes 2 0.0032171 116.37 By MS/MS 1 0 1 1 147730 147730 0 8838 2439 9138 21995 15514 15514 1500 1 7217.8 0 LLESTLR AVLGMDKAVAEPVSRLLESTLRSSHLPSRV AVAEPVSRLLESTLRSSHLPSRVGALHGVL R L L L R S 0 1 0 0 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 P42858 P42858 2766 2772 HTT Huntingtin yes yes 2 0.022143 120.49 By MS/MS 1.5 0.5 1 1 2 631910 631910 0 8839 858 9139 21996;21997 15515 15515 1 31022 0 LLETECPQYIR IKGNFHAVYRDDLKKLLETECPQYIRKKGA DLKKLLETECPQYIRKKGADVWFKELDINT K L L I R K 0 1 0 0 1 1 2 0 0 1 2 0 0 0 1 0 1 0 1 0 0 0 11 0 1420.7021 P05109 P05109 37 47 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 2 0.0063828 113.22 By MS/MS 6 2.58 1 1 1 1 1 1 1 1 1 9 951840 0 951840 8840 468 9140 21998;21999;22000;22001;22002;22003;22004;22005;22006 15516;15517 15517 2 0 10018000 LLETLFVHR VHLACICHSFHYIKRLLETLFVHRFSHGTM FHYIKRLLETLFVHRFSHGTMPLRNIFKNC R L L H R F 0 1 0 0 0 0 1 0 1 0 3 0 0 1 0 0 1 0 0 1 0 0 9 0 1126.6499 Q9NZ01 Q9NZ01 142 150 TECR Very-long-chain enoyl-CoA reductase yes yes 2;3 0.00028226 180.93 By MS/MS 1 0 2 2 778200 778200 0 8841 2703 9141 22007;22008 15518;15519 15519 2 38021 0 LLETQDGAEK QQRRLLGRHEQVVERLLETQDGAEKQLREI QVVERLLETQDGAEKQLREILTMEKEVAQS R L L E K Q 1 0 0 1 0 1 2 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1102.5506 Q8NBT2 Q8NBT2 41 50 SPC24 Kinetochore protein Spc24 yes yes 2 0.002452 115.78 By MS/MS 7.5 0.5 1 1 2 655490 655490 0 8842 1946 9142 22009;22010 15520 15520 1 33310 0 LLETTDRPDGHQNNLR ATYCLSSSFELIVQKLLETTDRPDGHQNNL LETTDRPDGHQNNLRSSAYESLMEIVKNSA K L L L R S 0 2 2 2 0 1 1 1 1 0 3 0 0 0 1 0 2 0 0 0 0 0 16 1 1877.9344 Q14974 Q14974 510 525 KPNB1 Importin subunit beta-1 yes yes 3 0.014162 74.475 By MS/MS 4.5 0.5 1 1 2 3823800 3823800 0 8843 1452 9143 22011;22012 15521 15521 1 118490 0 LLETTEEDK KEMKAAAREEAKNIKLLETTEEDKQKNFLF EAKNIKLLETTEEDKQKNFLFLRLWDRNMD K L L D K Q 0 0 0 1 0 0 3 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 9 0 1076.5237 Q7L0Y3 Q7L0Y3 165 173 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.020116 96.668 By MS/MS 7 0 1 1 307480 307480 0 8844 1761 9144 22013 15522 15522 1 5494.6 0 LLETTEEDKQK KEMKAAAREEAKNIKLLETTEEDKQKNFLF KNIKLLETTEEDKQKNFLFLRLWDRNMDIA K L L Q K N 0 0 0 1 0 1 3 0 0 0 2 2 0 0 0 0 2 0 0 0 0 0 11 1 1332.6773 Q7L0Y3 Q7L0Y3 165 175 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2;3 8.3273E-16 230.24 By MS/MS By matching 7.25 0.433 3 1 3 1 10662000 10642000 20392 8845 1761 9145 22014;22015;22016;22017 15523;15524 15523 2 202800 83713 LLETTEEDKQKNFLFLR KEMKAAAREEAKNIKLLETTEEDKQKNFLF ETTEEDKQKNFLFLRLWDRNMDIAMGWKGA K L L L R L 0 1 1 1 0 1 3 0 0 0 4 2 0 2 0 0 2 0 0 0 0 0 17 2 2123.1263 Q7L0Y3 Q7L0Y3 165 181 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 3 0.0002764 123.68 By MS/MS 7 0 1 1 2335600 2335600 0 8846 1761 9146 22018 15525 15525 1 41737 0 LLETVIDVSTADR GSNRALFRQPDLVLRLLETVIDVSTADRAI LRLLETVIDVSTADRAIPESQIRQVIHLIL R L L D R A 1 1 0 2 0 0 1 0 0 1 2 0 0 0 0 1 2 0 0 2 0 0 13 0 1430.7617 P57678 P57678 457 469 GEMIN4 Gem-associated protein 4 yes yes 2 1.3074E-17 220.5 By MS/MS 4 0 1 1 344260 344260 0 8847 1054 9147 22019 15526 15526 1 9397.8 0 LLEVEHPAAK IGDVTITNDGATILKLLEVEHPAAKVLCEL ATILKLLEVEHPAAKVLCELADLQDKEVGD K L L A K V 2 0 0 0 0 0 2 0 1 0 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1105.6132 P17987 P17987 64 73 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.00045357 146.79 By MS/MS 5.41 3.09 2 2 2 2 1 1 1 2 2 2 17 129690000 129690000 0 8848 619 9148 22020;22021;22022;22023;22024;22025;22026;22027;22028;22029;22030;22031;22032;22033;22034;22035;22036 15527;15528;15529;15530;15531;15532;15533;15534;15535;15536 15532 10 3252300 0 LLEVIILQCK LTGVAGEDAECHAAKLLEVIILQCKGRGID CHAAKLLEVIILQCKGRGIDQCIPLFVEAA K L L C K G 0 0 0 0 1 1 1 0 0 2 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1227.7261 O95373;O15397 O95373 741 750 IPO7;IPO8 Importin-7;Importin-8 no no 2 9.5372E-05 166.16 By MS/MS 3.5 0.5 1 1 2 1090500 1090500 0 8849 388;175 9149 22037;22038 15537 15537 1 29692 0 LLEVQGSRPGK MSDSEKLNLDSIIGRLLEVQGSRPGKNVQL IIGRLLEVQGSRPGKNVQLTENEIRGLCLK R L L G K N 0 1 0 0 0 1 1 2 0 0 2 1 0 0 1 1 0 0 0 1 0 0 11 1 1182.6721 P62136 P62136 16 26 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 0.0023597 157.75 By MS/MS 8.5 0.5 1 1 2 1559400 1559400 0 8850 1114 9150 22039;22040 15538 15538 1 141280 0 LLEVQSQVEELQK RKNELETENRLVNQRLLEVQSQVEELQKSL QRLLEVQSQVEELQKSLQDQGSKAEDSVLL R L L Q K S 0 0 0 0 0 3 3 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 13 0 1541.8301 Q86VS8 Q86VS8 517 529 HOOK3 Protein Hook homolog 3 yes yes 2 2.2261E-35 268.14 By MS/MS 5.5 0.5 1 1 2 1620300 1620300 0 8851 1831 9151 22041;22042 15539 15539 1 56902 0 LLEVYDQLFK FVIQTMNEIGVPLPRLLEVYDQLFKSRDPF VPLPRLLEVYDQLFKSRDPFWNRMKKPLHL R L L F K S 0 0 0 1 0 1 1 0 0 0 3 1 0 1 0 0 0 0 1 1 0 0 10 0 1266.686 O75694 O75694 1299 1308 NUP155 Nuclear pore complex protein Nup155 yes yes 2 0.013098 101.97 By MS/MS 3.5 0.5 1 1 2 803360 803360 0 8852 324 9152 22043;22044 15540 15540 1 21172 0 LLEYTPTAR FRPRTPPEAIALCSRLLEYTPTARLTPLEA IALCSRLLEYTPTARLTPLEACAHSFFDEL R L L A R L 1 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 2 0 1 0 0 0 9 0 1062.571 P49841 P49841 320 328 GSK3B Glycogen synthase kinase-3 beta yes yes 2 0.01145 101.64 By MS/MS 7 0 1 1 1244800 1244800 0 8853 937 9153 22045 15541;15542 15542 2 22246 0 LLFEGAGSNPGDK YEQVKNVADYYPEYKLLFEGAGSNPGDKTL YKLLFEGAGSNPGDKTLEDRFFEHEVKLNK K L L D K T 1 0 1 1 0 0 1 3 0 0 2 1 0 1 1 1 0 0 0 0 0 0 13 0 1303.6408 P61421 P61421 276 288 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 2 5.0471E-08 191.29 By MS/MS 7.5 0.5 1 1 2 4303700 4303700 0 8854 1099 9154 22046;22047 15543;15544 15543 2 120000 0 LLFFAPTR PIGAEVPDVTATPARLLFFAPTRRAAPLEE VTATPARLLFFAPTRRAAPLEEMEAPAADA R L L T R R 1 1 0 0 0 0 0 0 0 0 2 0 0 2 1 0 1 0 0 0 0 0 8 0 963.55419 Q07820 Q07820 96 103 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 yes yes 2 0.024577 101.33 By MS/MS 7 0 1 1 477690 477690 0 8855 1282 9155 22048 15545 15545 1 8536.5 0 LLFLLTALR RERSFPHDVQFFDLRLLFLLTALRTDVRQQ QFFDLRLLFLLTALRTDVRQQLFQELKGVR R L L L R T 1 1 0 0 0 0 0 0 0 0 5 0 0 1 0 0 1 0 0 0 0 0 9 0 1058.6852 Q9NPQ8 Q9NPQ8 167 175 RIC8A Synembryn-A yes yes 2 0.00051411 153.04 By MS/MS 6 0 1 1 56893 56893 0 8856 2584 9156 22049 15546 15546 1 443.65 0 LLFNLSEVK AVEKEYMKQLVKLTRLLFNLSEVKSIFSKA LVKLTRLLFNLSEVKSIFSKAQVEYLSISE R L L V K S 0 0 1 0 0 0 1 0 0 0 3 1 0 1 0 1 0 0 0 1 0 0 9 0 1061.6121 Q6ZRQ5 Q6ZRQ5 859 867 MMS22L Protein MMS22-like yes yes 2 0.00063318 150.36 By MS/MS 3 0 1 1 143380 143380 0 8857 1742 9157 22050 15547 15547 1 3742.9 0 LLFPAVDDNLLK ASPRYIFTMLSTLARLLFPAVDDNLLKFLY LARLLFPAVDDNLLKFLYDDNQRVEPEWYI R L L L K F 1 0 1 2 0 0 0 0 0 0 4 1 0 1 1 0 0 0 0 1 0 0 12 0 1356.7653 Q02880 Q02880 837 848 TOP2B DNA topoisomerase 2-beta yes yes 2 0.013501 93.111 By MS/MS 3.5 0.5 1 1 2 586120 586120 0 8858 1258 9158 22051;22052 15548 15548 1 15467 0 LLFSNTAAQK VKKHNGVGGSPPKSKLLFSNTAAQKLRGMD PPKSKLLFSNTAAQKLRGMDEVYNLFYVNN K L L Q K L 2 0 1 0 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 10 0 1091.5975 Q96ST3 Q96ST3 866 875 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.004493 109.11 By MS/MS 3 0 1 1 427740 427740 0 8859 2256 9159 22053 15549 15549 1 11166 0 LLFTMLEK KFCMISATFCDSQLRLLFTMLEKSPLPIVR FCDSQLRLLFTMLEKSPLPIVRSNLMVATG R L L E K S 0 0 0 0 0 0 1 0 0 0 3 1 1 1 0 0 1 0 0 0 0 0 8 0 993.55689 Q15021 Q15021 1058 1065 NCAPD2 Condensin complex subunit 1 yes yes 2 0.023957 101.64 By MS/MS 4 0.816 1 1 1 3 316660 316660 0 8860 1464 9160 22054;22055;22056 15550 15550 1 9011.5 0 LLFYATSR DKFTWKKSQMKEEGKLLFYATSRAYVESIC QMKEEGKLLFYATSRAYVESICSNNFDSFL K L L S R A 1 1 0 0 0 0 0 0 0 0 2 0 0 1 0 1 1 0 1 0 0 0 8 0 969.52837 Q7Z2W4 Q7Z2W4 784 791 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.0080258 125.81 By MS/MS 5.5 1.12 1 1 1 1 4 2021500 2021500 0 8861 1777 9161 22057;22058;22059;22060 15551 15551 1 37389 0 LLFYDEVSR LSSVLLYRSAPEDLRLLFYDEVSRLESFWA APEDLRLLFYDEVSRLESFWALRVVCQEQL R L L S R L 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 1 0 0 1 1 0 0 9 0 1140.5815 Q8N1F8 Q8N1F8 1034 1042 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.0010268 141.52 By MS/MS 3 0 1 1 909000 909000 0 8862 1899 9162 22061 15552 15552 1 23730 0 LLGASELPIVTPALR IGMVVKTGVVPQLVKLLGASELPIVTPALR LLGASELPIVTPALRAIGNIVTGTDEQTQV K L L L R A 2 1 0 0 0 0 1 1 0 1 4 0 0 0 2 1 1 0 0 1 0 0 15 0 1548.9239 P52292 P52292 301 315 KPNA2 Importin subunit alpha-1 yes yes 2;3 2.9435E-07 155.39 By MS/MS 6.4 1.02 1 2 1 1 5 41868000 41868000 0 8863 983 9163 22062;22063;22064;22065;22066 15553;15554;15555;15556 15554 4 345770 0 LLGDLLPEAVR KYLEYEKKHGSGDWRLLGDLLPEAVRFFKE GDWRLLGDLLPEAVRFFKEGVPGADMLPQP R L L V R F 1 1 0 1 0 0 1 1 0 0 4 0 0 0 1 0 0 0 0 1 0 0 11 0 1194.6972 Q9H1B7 Q9H1B7 473 483 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0051683 114.5 By MS/MS 4 0 1 1 189630 189630 0 8864 2464 9164 22067 15557 15557 1 5176.8 0 LLGELLLDR LLHSENYVTKRQSLKLLGELLLDRHNFTIM KRQSLKLLGELLLDRHNFTIMTKYISKPEN K L L D R H 0 1 0 1 0 0 1 1 0 0 5 0 0 0 0 0 0 0 0 0 0 0 9 0 1040.623 Q9Y376 Q9Y376 232 240 CAB39 Calcium-binding protein 39 yes yes 2 0.0091407 106.68 By MS/MS 7 0 1 1 121530 121530 0 8865 2916 9165 22068 15558 15558 1 2171.8 0 LLGFLDVENTPCAR APPEPGEPEERKSLKLLGFLDVENTPCARH KLLGFLDVENTPCARHSILYGSLGSVVAGF K L L A R H 1 1 1 1 1 0 1 1 0 0 3 0 0 1 1 0 1 0 0 1 0 0 14 0 1603.8028 Q5RI15 Q5RI15 18 31 COX20 Cytochrome c oxidase protein 20 homolog yes yes 2 1.4698E-05 164.48 By MS/MS 10 0 1 1 438330 438330 0 8866 1614 9166 22069 15559 15559 1 465900 0 LLGGLAVR RGLCAIAQAESLRYKLLGGLAVRRACYGVL AESLRYKLLGGLAVRRACYGVLRFIMESGA K L L V R R 1 1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 797.51232 P23396 P23396 109 116 RPS3 40S ribosomal protein S3 yes yes 2 0.0031212 149.06 By MS/MS 8.5 1.12 1 1 1 1 4 9973600 9973600 0 8867 668 9167 22070;22071;22072;22073 15560 15560 1 811220 0 LLGHEVEDVIIK FAVDETSVSGYIYHKLLGHEVEDVIIKCQL YHKLLGHEVEDVIIKCQLPKRFTAQGLPDL K L L I K C 0 0 0 1 0 0 2 1 1 2 2 1 0 0 0 0 0 0 0 2 0 0 12 0 1363.7711 Q92900 Q92900 456 467 UPF1 Regulator of nonsense transcripts 1 yes yes 2;3 7.6819E-05 170.99 By MS/MS 3.8 0.748 2 2 1 5 3333300 3333300 0 8868 2088 9168 22074;22075;22076;22077;22078 15561;15562 15561 2 89601 0 LLGIFEQNQDR REVYEEAGVKGKLGRLLGIFEQNQDRKHRT KLGRLLGIFEQNQDRKHRTYVYVLTVTEIL R L L D R K 0 1 1 1 0 2 1 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1331.6834 A0A024RBG1 A0A024RBG1 80 90 NUDT4 yes yes 2 0.019995 99.788 By MS/MS 9 0 1 1 109760 109760 0 8869 0 9169 22079 15563 15563 1 62990 0 LLGITPVCR HLFKAVRSVLANGMKLLGITPVCRM_____ LANGMKLLGITPVCRM______________ K L L C R M 0 1 0 0 1 0 0 1 0 1 2 0 0 0 1 0 1 0 0 1 0 0 9 0 1027.5848 Q5T160 Q5T160 569 577 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.0020321 129.47 By MS/MS 6 0 1 1 3900200 3900200 0 8870 1624 9170 22080 15564 15564 1 30414 0 LLGLTGSTK DVEAMARYVQDFHPRLLGLTGSTKQVAQAS QDFHPRLLGLTGSTKQVAQASHSYRVYYNA R L L T K Q 0 0 0 0 0 0 0 2 0 0 3 1 0 0 0 1 2 0 0 0 0 0 9 0 888.52803 O43819 O43819 188 196 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.0037286 118.5 By MS/MS By matching 8.75 0.829 2 1 1 3 1 13081000 13056000 24437 8871 226 9171 22081;22082;22083;22084 15565 15565 1 1089700 208480 LLGNLVVK TGLVEAALGPEVLSRLLGNLVVKNKKAQFV GPEVLSRLLGNLVVKNKKAQFVMTQKLLFL R L L V K N 0 0 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 2 0 0 8 0 854.55894 Q9Y4R8 Q9Y4R8 284 291 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0072092 128.86 By MS/MS 4 0 1 1 824920 824920 0 8872 2958 9172 22085 15566 15566 1 22519 0 LLGPDAAINLTDPDGALAK LAALKQQLVASHLEKLLGPDAAINLTDPDG DAAINLTDPDGALAKRLLLQLEATKNSKGG K L L A K R 4 0 1 3 0 0 0 2 0 1 4 1 0 0 2 0 1 0 0 0 0 0 19 0 1863.9942 Q13561 Q13561 157 175 DCTN2 Dynactin subunit 2 yes yes 2 3.8811E-19 196.18 By MS/MS 6.5 0.5 1 1 2 13339000 13339000 0 8873 1382 9173 22086;22087 15567;15568 15567 2 109120 0 LLGPVLVK KEELALLDGSNVVFKLLGPVLVKQELGEAR GSNVVFKLLGPVLVKQELGEARATVGKRLD K L L V K Q 0 0 0 0 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 2 0 0 8 0 837.56878 O15212 O15212 59 66 PFDN6 Prefoldin subunit 6 yes yes 2 0.020367 106.29 By MS/MS 10 0 1 1 776180 776180 0 8874 159 9174 22088 15569 15569 1 825000 0 LLGQFTLIGIPPAPR IKVCQGEREMAGDNKLLGQFTLIGIPPAPR LLGQFTLIGIPPAPRGVPQIEVTFDIDANG K L L P R G 1 1 0 0 0 1 0 2 0 2 3 0 0 1 3 0 1 0 0 0 0 0 15 0 1591.945 P38646 P38646 499 513 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0004243 126.12 By MS/MS 5.5 0.5 1 1 2 436650 436650 0 8875 820 9175 22089;22090 15570 15570 1 4723.1 0 LLGQPSLDSLPIPAPR GSGKTLSYLLPLLQRLLGQPSLDSLPIPAP LGQPSLDSLPIPAPRGLVLVPSRELAQQVR R L L P R G 1 1 0 1 0 1 0 1 0 1 4 0 0 0 4 2 0 0 0 0 0 0 16 0 1672.9512 Q9NUL7 Q9NUL7 190 205 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 2.1164E-07 161.87 By MS/MS 6 0 1 1 6143600 6143600 0 8876 2638 9176 22091 15571;15572 15571 2 47908 0 LLGSLYALGIPK LNSQIASVWHGTLSKLLGSLYALGIPKASK LSKLLGSLYALGIPKASKELQSVEQEVRWR K L L P K A 1 0 0 0 0 0 0 2 0 1 4 1 0 0 1 1 0 0 1 0 0 0 12 0 1243.754 Q969Z0 Q969Z0 149 160 TBRG4 Protein TBRG4 yes yes 2 8.4905E-11 196.88 By MS/MS 6 0 1 1 4104800 4104800 0 8877 2112 9177 22092 15573 15573 1 32010 0 LLGSMPENAQIDDDVFDK NSNAVRFRVCLLINKLLGSMPENAQIDDDV SMPENAQIDDDVFDKINKAMLIRLKDKIPN K L L D K I 1 0 1 4 0 1 1 1 0 1 2 1 1 1 1 1 0 0 0 1 0 0 18 0 2005.9303 Q9BPX3 Q9BPX3 125 142 NCAPG Condensin complex subunit 3 yes yes 2 0.00026697 122.66 By MS/MS 4 0 1 1 406990 406990 0 8878 2302 9178 22093 15574 15574 1 11110 0 LLGSSDSPASASR KLECSGTILAHSNLRLLGSSDSPASASRVA LRLLGSSDSPASASRVAGITGVCHHAQDQV R L L S R V 2 1 0 1 0 0 0 1 0 0 2 0 0 0 1 5 0 0 0 0 0 0 13 0 1246.6153 P51957 P51957 478 490 NEK4 Serine/threonine-protein kinase Nek4 yes yes 2 0.0050863 102.95 By MS/MS 4 0 1 1 672130 672130 0 8879 979 9179 22094 15575 15575 1 18348 0 LLGTIYTAAEEIEAVGGK ANIVIAAKTAQPHPKLLGTIYTAAEEIEAV TIYTAAEEIEAVGGKALPCIVDVRDEQQIS K L L G K A 3 0 0 0 0 0 3 3 0 2 2 1 0 0 0 0 2 0 1 1 0 0 18 0 1833.9724 Q6YN16 Q6YN16 50 67 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 2 2.1181E-33 283.21 By MS/MS 6 0 1 1 1657800 1657800 0 8880 1738 9180 22095 15576 15576 1 12928 0 LLGVFEQNQDPK REVYEEAGVKGKLGRLLGVFEQNQDPKHRT LGRLLGVFEQNQDPKHRTYVYVLTVTELLE R L L P K H 0 0 1 1 0 2 1 1 0 0 2 1 0 1 1 0 0 0 0 1 0 0 12 0 1386.7143 Q8NFP7 Q8NFP7 79 90 NUDT10 Diphosphoinositol polyphosphate phosphohydrolase 3-alpha yes yes 2 0.00071962 136.52 By MS/MS 9 0 1 1 305210 305210 0 8881 1972 9181 22096 15577 15577 1 175160 0 LLGVFEQNQDRK REVYEEAGVKGKLGRLLGVFEQNQDRKHRT LGRLLGVFEQNQDRKHRTYVYVLTVTELLE R L L R K H 0 1 1 1 0 2 1 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 12 1 1445.7627 Q96G61 Q96G61 79 90 NUDT11 Diphosphoinositol polyphosphate phosphohydrolase 3-beta yes yes 2 0.00015936 167.93 By MS/MS 9 0 1 1 294280 294280 0 8882 2178 9182 22097 15578 15578 1 168890 0 LLGVLAESCGGK RPVLIHRAVLGSVERLLGVLAESCGGKWPL VERLLGVLAESCGGKWPLWLSPFQVVVIPV R L L G K W 1 0 0 0 1 0 1 3 0 0 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1202.6329 Q9BW92 Q9BW92 595 606 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.0041482 110.38 By MS/MS 5 0 1 1 2081100 2081100 0 8883 2391 9183 22098 15579 15579 1 85540 0 LLGYVATLK ATCVRLLGRNSNSKRLLGYVATLKDNFGFI NSNSKRLLGYVATLKDNFGFIETANHDKEI R L L L K D 1 0 0 0 0 0 0 1 0 0 3 1 0 0 0 0 1 0 1 1 0 0 9 0 976.59572 O75534 O75534 519 527 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.0089921 107.01 By MS/MS 4.5 0.5 1 1 2 1371000 1371000 0 8884 316 9184 22099;22100 15580 15580 1 53396 0 LLHEVQELTTEVEK EGLGVKETPQQKYQRLLHEVQELTTEVEKI RLLHEVQELTTEVEKIKTTVKESATEEKLT R L L E K I 0 0 0 0 0 1 4 0 1 0 3 1 0 0 0 0 2 0 0 2 0 0 14 0 1666.8778 Q13561 Q13561 106 119 DCTN2 Dynactin subunit 2 yes yes 2;3 2.0903E-08 191.48 By MS/MS 6 0 2 2 11820000 11820000 0 8885 1382 9185 22101;22102 15581;15582 15581 2 92172 0 LLHEVQELTTEVEKIK EGLGVKETPQQKYQRLLHEVQELTTEVEKI LHEVQELTTEVEKIKTTVKESATEEKLTPV R L L I K T 0 0 0 0 0 1 4 0 1 1 3 2 0 0 0 0 2 0 0 2 0 0 16 1 1908.0568 Q13561 Q13561 106 121 DCTN2 Dynactin subunit 2 yes yes 3 3.2828E-07 157.07 By MS/MS 6 0 1 1 9933600 9933600 0 8886 1382 9186 22103 15583 15583 1 77462 0 LLHVAVSDVNDDVR AMAYCGSGNNKAIRRLLHVAVSDVNDDVRR RLLHVAVSDVNDDVRRAAVESLGFILFRTP R L L V R R 1 1 1 3 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 4 0 0 14 0 1550.8053 Q99460 Q99460 602 615 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2;3 0.0012995 140.63 By MS/MS 4 0 2 2 3632200 3632200 0 8887 2268 9187 22104;22105 15584;15585 15585 2 99155 0 LLIALLESNQQK QFAHTVNATACAVPRLLIALLESNQQKDGS VPRLLIALLESNQQKDGSVLVPPALQSYLG R L L Q K D 1 0 1 0 0 2 1 0 0 1 4 1 0 0 0 1 0 0 0 0 0 0 12 0 1368.7977 Q9NP81 Q9NP81 460 471 SARS2 Serine--tRNA ligase, mitochondrial yes yes 2 4.8505E-33 261.6 By MS/MS 6.5 0.5 1 1 2 2584700 2584700 0 8888 2576 9188 22106;22107 15586;15587 15586 2 21038 0 LLIDEAILK DALANLKVSQIKKVRLLIDEAILKCDAERI QIKKVRLLIDEAILKCDAERIKLEAERFEN R L L L K C 1 0 0 1 0 0 1 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1026.6325 P49591 P49591 108 116 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 0.0026774 122.52 By MS/MS 6 0 1 1 1398000 1398000 0 8889 922 9189 22108 15588 15588 1 10902 0 LLIEMEQR FSEVELVQMVVDGVKLLIEMEQRLEQGQAI MVVDGVKLLIEMEQRLEQGQAIDDLMPAQK K L L Q R L 0 1 0 0 0 1 2 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 8 0 1030.5481 P12277 P12277 359 366 CKB Creatine kinase B-type yes yes 2 0.010733 118.74 By MS/MS 7.5 0.5 1 1 2 2070000 2070000 0 8890 565 9190 22109;22110 15589 15589 1 45569 0 LLIIGTTSR ALLVLLKKAPPQGRKLLIIGTTSRKDVLQE PPQGRKLLIIGTTSRKDVLQEMEMLNAFST K L L S R K 0 1 0 0 0 0 0 1 0 2 2 0 0 0 0 1 2 0 0 0 0 0 9 0 972.59678 P46459 P46459 640 648 NSF Vesicle-fusing ATPase yes yes 2 0.0025322 124.08 By MS/MS 5 0 1 1 5010400 5010400 0 8891 881 9191 22111 15590 15590 1 205950 0 LLILALER SPIPFPPLSYKHDTKLLILALERLKEAYSV SYKHDTKLLILALERLKEAYSVKSRLNQSQ K L L E R L 1 1 0 0 0 0 1 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 8 0 939.6117 Q6P2Q9 Q6P2Q9 838 845 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0043796 139.68 By MS/MS 2.5 1.12 1 1 1 1 4 1158800 1158800 0 8892 1706 9192 22112;22113;22114;22115 15591;15592;15593;15594;15595 15592 5 43666 0 LLILMEAR PEMQYVKIKDVARGRLLILMEARLSALYKL KDVARGRLLILMEARLSALYKLESDYEILE R L L A R L 1 1 0 0 0 0 1 0 0 1 3 0 1 0 0 0 0 0 0 0 0 0 8 0 957.56812 P41252 P41252 255 262 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0084907 124.08 By MS/MS 3.8 0.748 2 2 1 5 5001500 5001500 0 8893 840 9193;9194 22116;22117;22118;22119;22120 15596;15597 15597 593 2 131880 0 LLIVSTTPYSEK SYQSPHGIPIDLLDRLLIVSTTPYSEKDTK LDRLLIVSTTPYSEKDTKQILRIRCEEEDV R L L E K D 0 0 0 0 0 0 1 0 0 1 2 1 0 0 1 2 2 0 1 1 0 0 12 0 1349.7442 Q9Y230 Q9Y230 354 365 RUVBL2 RuvB-like 2 yes yes 2 0.021531 84.17 By matching By MS/MS 6.5 0.5 1 1 1 1 671850 570350 101500 8894 2864 9195 22121;22122 15598 15598 1 10192 311300 LLIVSTTPYSEKDTK SYQSPHGIPIDLLDRLLIVSTTPYSEKDTK LLIVSTTPYSEKDTKQILRIRCEEEDVEMS R L L T K Q 0 0 0 1 0 0 1 0 0 1 2 2 0 0 1 2 3 0 1 1 0 0 15 1 1693.9138 Q9Y230 Q9Y230 354 368 RUVBL2 RuvB-like 2 yes yes 2 3.0188E-05 154.36 By MS/MS 7 0.816 1 1 1 3 19194000 19194000 0 8895 2864 9196 22123;22124;22125 15599 15599 1 159270 0 LLKEGSSNQR QRALPSEELNRQLEKLLKEGSSNQRVFDWI RQLEKLLKEGSSNQRVFDWIEANLSEQQIV K L L Q R V 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 1 1130.6044 Q04637 Q04637 1450 1459 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 3.916E-06 188.87 By MS/MS 3.7 1.79 1 2 2 2 1 1 1 10 8294500 8294500 0 8896 1264 9197 22126;22127;22128;22129;22130;22131;22132;22133;22134;22135 15600;15601 15600 2 388000 0 LLKELHKESK IDSARKQNNFSLAMKLLKELHKESKTRDDW SLAMKLLKELHKESKTRDDWLVSWVQSYCR K L L S K T 0 0 0 0 0 0 2 0 1 0 3 3 0 0 0 1 0 0 0 0 0 0 10 2 1223.7238 P78527 P78527 3258 3267 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.051608 64.103 By MS/MS 1 0 1 1 0 0 0 8897 1197 9198 22136 15602 15602 1 0 0 LLKNHDEESLECLCR LKMLTEAIMHDCVVKLLKNHDEESLECLCR LLKNHDEESLECLCRLLTTIGKDLDFEKAK K L L C R L 0 1 1 1 2 0 3 0 1 0 4 1 0 0 0 1 0 0 0 0 0 0 15 1 1914.8928 Q04637;O43432 Q04637 923 937 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 3 0.006697 88.768 By MS/MS 3 0 1 1 702440 702440 0 8898 1264;200 9199 22137 15603 15603 1 18337 0 LLKPYTGSK QFFDDSPTRGWVSKRLLKPYTGSKSKEAQK GWVSKRLLKPYTGSKSKEAQKGGHFYSAKP R L L S K S 0 0 0 0 0 0 0 1 0 0 2 2 0 0 1 1 1 0 1 0 0 0 9 1 1005.5859 P52701 P52701 147 155 MSH6 DNA mismatch repair protein Msh6 yes yes 3 0.013828 90.906 By MS/MS 3 0 1 1 543110 543110 0 8899 989 9200 22138 15604 15604 1 14178 0 LLLAALGR CETKKAYFLGYMVHRLLLAALGRRELDDRD LGYMVHRLLLAALGRRELDDRDHYGNKRLD R L L G R R 2 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 825.54362 P30876 P30876 372 379 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.016189 111.69 By MS/MS 3 0 1 1 370520 370520 0 8900 748 9201 22139 15605 15605 1 9672.3 0 LLLAGAGR L L G R 2 1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 769.48102 REV__P41219 yes yes 2 0.0091325 121.68 By MS/MS 8.5 0.5 2 2 4 1720700 1720700 0 + 8901 3024 9202 22140;22141;22142;22143 15606;15607 15606 2 382520 0 LLLCGGAPLSATTQR FVFRKVRSLLGGNIRLLLCGGAPLSATTQR LLLCGGAPLSATTQRFMNICFCCPVGQGYG R L L Q R F 2 1 0 0 1 1 0 2 0 0 4 0 0 0 1 1 2 0 0 0 0 0 15 0 1556.8345 O95573 O95573 447 461 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 6.8837E-08 174.57 By MS/MS 3.5 2.06 1 1 1 1 4 7958700 7958700 0 8902 400 9203 22144;22145;22146;22147 15608;15609;15610;15611 15611 4 292680 0 LLLDDLVPTSR AARHGERPGGEELSRLLLDDLVPTSRLELL ELSRLLLDDLVPTSRLELLFGMTPCLLALQ R L L S R L 0 1 0 2 0 0 0 0 0 0 4 0 0 0 1 1 1 0 0 1 0 0 11 0 1240.7027 Q6IN84 Q6IN84 38 48 MRM1 rRNA methyltransferase 1, mitochondrial yes yes 2 0.00042275 145.89 By MS/MS 7.5 0.5 1 1 2 1095900 1095900 0 8903 1684 9204 22148;22149 15612;15613 15613 2 57458 0 LLLDEITR KAIARFFPKPYDDSRLLLDEITRAQDLFLD KPYDDSRLLLDEITRAQDLFLDGVPLRKTI R L L T R A 0 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 8 0 971.56515 Q63HN8 Q63HN8 2720 2727 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.019122 107.9 By MS/MS 1 0 1 1 190740 190740 0 8904 1666 9205 22150 15614;15615 15615 2 9319.3 0 LLLDQEQK DRAQKAFEAVDKAYKLLLDQEQKKRALDVI AVDKAYKLLLDQEQKKRALDVIQAGKEYVE K L L Q K K 0 0 0 1 0 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 985.54441 O75937 O75937 109 116 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 2 0.016674 110.41 By MS/MS 8 0 1 1 1721800 1721800 0 8905 339 9206 22151 15616 15616 1 113580 0 LLLDTLQLSK EDLEEAGVQDPAHKRLLLDTLQLSK_____ PAHKRLLLDTLQLSK_______________ R L L S K - 0 0 0 1 0 1 0 0 0 0 5 1 0 0 0 1 1 0 0 0 0 0 10 0 1142.6911 O15357 O15357 1249 1258 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 2 0.00083711 130.41 By MS/MS 3 0 1 1 185280 185280 0 8906 171 9207 22152 15617 15617 1 4836.8 0 LLLEEDENEESGSIK ECLAEEIKIGDYYLRLLLEEDENEESGSIK LLLEEDENEESGSIKRSYEFFNELYHRFLL R L L I K R 0 0 1 1 0 0 5 1 0 1 3 1 0 0 0 2 0 0 0 0 0 0 15 0 1703.8101 O75165 O75165 834 848 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 2.8957E-14 201.09 By MS/MS 2 0 1 1 166270 166270 0 8907 287 9208 22153 15618 15618 1 8264.7 0 LLLEGVENK AELSLVFVDKPEKAKLLLEGVENKLIPGLK KPEKAKLLLEGVENKLIPGLKIIVVMDAYG K L L N K L 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 1013.5757 P33121 P33121 208 216 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.002157 128.12 By MS/MS 5 0 1 1 2263400 2263400 0 8908 766 9209 22154 15619 15619 1 93037 0 LLLENYEEYAAR IHPNPESALNEEAGRLLLENYEEYAARARL AGRLLLENYEEYAARARLLTEIHGGAGGPS R L L A R A 2 1 1 0 0 0 3 0 0 0 3 0 0 0 0 0 0 0 2 0 0 0 12 0 1482.7355 Q16763 Q16763 136 147 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 2 0.0047234 119.27 By MS/MS 8.5 0.5 1 1 2 1692500 1692500 0 8909 1547 9210 22155;22156 15620 15620 1 284220 0 LLLEQILNK LPHVFVNCVECFTLRLLLEQILNKLNHLSS ECFTLRLLLEQILNKLNHLSSSEDGCSTEI R L L N K L 0 0 1 0 0 1 1 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 9 0 1082.6699 O43913 O43913 71 79 ORC5 Origin recognition complex subunit 5 yes yes 2 0.00065211 149.94 By MS/MS 7 0 1 1 183680 183680 0 8910 233 9211 22157 15621 15621 1 3282.4 0 LLLFAIQR LAKIMRTRAKEIEVKLLLFAIQRTTNFEGF AKEIEVKLLLFAIQRTTNFEGFLAKRFSGC K L L Q R T 1 1 0 0 0 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 0 0 8 0 972.61204 Q5VIR6 Q5VIR6 343 350 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0069145 129.96 By MS/MS 4.5 0.5 1 1 2 206360 206360 0 8911 1645 9212 22158;22159 15622 15622 1 6066.1 0 LLLGAGAVAYGVR GRLPAGPRGMGTALKLLLGAGAVAYGVRES LKLLLGAGAVAYGVRESVFTVEGGHRAIFF K L L V R E 3 1 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 1 2 0 0 13 0 1258.7398 Q99623 Q99623 25 37 PHB2 Prohibitin-2 yes yes 2 3.8596E-06 175.44 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 3203500 3039800 163760 8912 2277 9213 22160;22161;22162 15623;15624 15624 2 242370 1397100 LLLGDLAPVR CVVGENGAGKSTMLKLLLGDLAPVRGIRHA STMLKLLLGDLAPVRGIRHAHRNLKIGYFS K L L V R G 1 1 0 1 0 0 0 1 0 0 4 0 0 0 1 0 0 0 0 1 0 0 10 0 1065.6546 Q9NUQ8 Q9NUQ8 537 546 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 2 0.003954 110.87 By MS/MS 5 0 1 1 699890 699890 0 8913 2641 9214 22163 15625 15625 1 28768 0 LLLIGDSGVGK ______________________________ YLFKLLLIGDSGVGKSCLLLRFADDTYTES K L L G K S 0 0 0 1 0 0 0 3 0 1 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1070.6336 P51153;P59190;P61006;P61026;P62820;Q92930;Q9H0U4;Q92928 Q9H0U4 11 21 RAB13;RAB15;RAB8A;RAB10;RAB1A;RAB8B;RAB1B;RAB1C Ras-related protein Rab-13;Ras-related protein Rab-15;Ras-related protein Rab-8A;Ras-related protein Rab-10;Ras-related protein Rab-1A;Ras-related protein Rab-8B;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 2 0.0051256 107.21 By MS/MS 5.89 3.21 1 1 1 1 1 1 2 1 9 14995000 14995000 0 8914 1145;2459;962;1080;1085;2091 9215 22164;22165;22166;22167;22168;22169;22170;22171;22172 15626;15627;15628 15627 3 7761800 0 LLLINNAGSLGDVSK LGALRELPRPKGLQRLLLINNAGSLGDVSK LLLINNAGSLGDVSKGFVDLSDSTQVNNYW R L L S K G 1 0 2 1 0 0 0 2 0 1 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1512.8512 P35270 P35270 95 109 SPR Sepiapterin reductase yes yes 2 3.1166E-07 166.62 By MS/MS 8.5 0.5 1 1 2 1103000 1103000 0 8915 790 9216 22173;22174 15629;15630 15629 2 190260 0 LLLLAGVDR FRGLSNLFLSCPIPKLLLLAGVDRLDKDLT SCPIPKLLLLAGVDRLDKDLTIGQMQGKFQ K L L D R L 1 1 0 1 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 9 0 968.60187 Q9Y570 Q9Y570 317 325 PPME1 Protein phosphatase methylesterase 1 yes yes 2 0.00060318 151.04 By MS/MS 7 0 1 1 414520 414520 0 8916 2965 9217 22175 15631 15631 1 7407.6 0 LLLLDTQQEAGMLLR KKLSKAVEKRFPHDKLLLLDTQQEAGMLLR LLLLDTQQEAGMLLRQLANQKQQHLAFRDR K L L L R Q 1 1 0 1 0 2 1 1 0 0 6 0 1 0 0 0 1 0 0 0 0 0 15 0 1712.9495 Q2NL82 Q2NL82 220 234 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 2.7526E-10 189.24 By MS/MS 4 0 1 1 299820 299820 0 8917 1560 9218 22176 15632 15632 1177 1 8184.8 0 LLLLGAGESGK KQLQKDKQVYRATHRLLLLGAGESGKSTIV ATHRLLLLGAGESGKSTIVKQMRILHVNGF R L L G K S 1 0 0 0 0 0 1 3 0 0 4 1 0 0 0 1 0 0 0 0 0 0 11 0 1056.6179 P63092;Q5JWF2;P11488;P63096;P19087;P09471;A8MTJ3;P38405;P04899;P08754 P63092 43 53 GNAS;GNAT1;GNAI1;GNAT2;GNAO1;GNAT3;GNAL;GNAI2;GNAI3 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 2 0.00031502 150.27 By MS/MS By matching 8 1.22 2 1 1 3 1 17163000 17148000 15059 8918 1168;460;508 9219 22177;22178;22179;22180 15633;15634;15635 15634 3 683450 61821 LLLLGSGVGTVR KSPLLSLEWATKRDRLLLLGSGVGTVRLYD RDRLLLLGSGVGTVRLYDTEAKKNLCEINI R L L V R L 0 1 0 0 0 0 0 3 0 0 4 0 0 0 0 1 1 0 0 2 0 0 12 0 1183.7289 A4D1P6 A4D1P6 465 476 WDR91 WD repeat-containing protein 91 yes yes 2 0.00041921 142.36 By MS/MS 5 0 1 1 222820 222820 0 8919 15 9220 22181 15636 15636 1 9158.9 0 LLLLGTGESGK KQLRRDKRDARRELKLLLLGTGESGKSTFI RELKLLLLGTGESGKSTFIKQMRIIHGAGY K L L G K S 0 0 0 0 0 0 1 3 0 0 4 1 0 0 0 1 1 0 0 0 0 0 11 0 1086.6285 P29992;O95837;P50148 P29992 42 52 GNA11;GNA14;GNAQ Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein G(q) subunit alpha yes no 2 5.0001E-07 186.78 By MS/MS 7 0 1 1 8528000 8528000 0 8920 727 9221 22182 15637 15637 1 152400 0 LLLLLESDPK GTYKYGYLTMDETRKLLLLLESDPKVYSLP DETRKLLLLLESDPKVYSLPLVGIWLSGIT K L L P K V 0 0 0 1 0 0 1 0 0 0 5 1 0 0 1 1 0 0 0 0 0 0 10 0 1139.6802 Q15468 Q15468 244 253 STIL SCL-interrupting locus protein yes yes 2 0.00088088 128.38 By MS/MS 3 0 1 1 78433 78433 0 8921 1505 9222 22183 15638 15638 1 2047.5 0 LLLNLAENPAMTR LFSAGNEETKLQVLKLLLNLAENPAMTREL LKLLLNLAENPAMTRELLRAQVPSSLGSLF K L L T R E 2 1 2 0 0 0 1 0 0 0 4 0 1 0 1 0 1 0 0 0 0 0 13 0 1454.7915 Q9UH62 Q9UH62 266 278 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 2 5.8743E-08 188.27 By MS/MS 7.5 0.5 1 1 2 2780100 2780100 0 8922 2777 9223 22184;22185 15639;15640 15639 1621 2 87178 0 LLLNLSENPAMTEGLLR VLLTGNGNTKVQVLKLLLNLSENPAMTEGL LNLSENPAMTEGLLRAQVDSSFLSLYDSHV K L L L R A 1 1 2 0 0 0 2 1 0 0 6 0 1 0 1 1 1 0 0 0 0 0 17 0 1883.0186 Q8N2F6 Q8N2F6 241 257 ARMC10 Armadillo repeat-containing protein 10 yes yes 2 0.0025557 109.44 By MS/MS 8 0 1 1 110560 110560 0 8923 1904 9224 22186 15641 15641 1293 1 7293.7 0 LLLNNDNLLR HAPPGEFNEVFNDVRLLLNNDNLLREGAAH FNDVRLLLNNDNLLREGAAHAFAQYNLDQF R L L L R E 0 1 3 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 1196.6877 P47755;P52907 P47755 38 47 CAPZA2;CAPZA1 F-actin-capping protein subunit alpha-2;F-actin-capping protein subunit alpha-1 no no 2 0.00014256 160.82 By MS/MS By matching 6.83 1.95 1 1 2 1 1 5 1 12340000 12321000 18906 8924 894;994 9225 22187;22188;22189;22190;22191;22192 15642;15643;15644;15645 15644 4 491160 77612 LLLNVTPTVR SSLTNIPEEVREHVKLLLNVTPTVRPDADQ REHVKLLLNVTPTVRPDADQMTKIPFFDDV K L L V R P 0 1 1 0 0 0 0 0 0 0 3 0 0 0 1 0 2 0 0 2 0 0 10 0 1124.6917 Q6P3W7 Q6P3W7 306 315 SCYL2 SCY1-like protein 2 yes yes 3 0.013373 83.948 By MS/MS 10 0 1 1 422220 422220 0 8925 1707 9226 22193 15646 15646 1 448780 0 LLLPGELAK KRSTITSREIQTAVRLLLPGELAKHAVSEG IQTAVRLLLPGELAKHAVSEGTKAVTKYTS R L L A K H 1 0 0 0 0 0 1 1 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 952.59572 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899;Q96A08;A0A2R8Y619 Q99880 101 109 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-A yes no 2 0.0098498 105.14 By MS/MS By matching 10 0 2 1 1 6488100 6434200 53867 8926 267 9227 22194;22195 15647 15647 1 6838900 1381600 LLLQDSQNVEALR LALQDWDQTVETAQRLLLQDSQNVEALRMQ QRLLLQDSQNVEALRMQALYYVCREGDIEK R L L L R M 1 1 1 1 0 2 1 0 0 0 4 0 0 0 0 1 0 0 0 1 0 0 13 0 1497.8151 Q7Z4L5 Q7Z4L5 238 250 TTC21B Tetratricopeptide repeat protein 21B yes yes 2 2.1744E-07 177.04 By MS/MS 3 0 1 1 1159500 1159500 0 8927 1794 9228 22196 15648 15648 1 30268 0 LLLQGLMDSVEAK LGYFPVGDGDFPHQKLLLQGLMDSVEAKQI QKLLLQGLMDSVEAKQIELQFTIGEAITSA K L L A K Q 1 0 0 1 0 1 1 1 0 0 4 1 1 0 0 1 0 0 0 1 0 0 13 0 1415.7694 Q5VYK3 Q5VYK3 880 892 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 2.0871E-06 175.74 By MS/MS 3.14 0.99 2 3 1 1 7 4354200 4354200 0 8928 1657 9229;9230 22197;22198;22199;22200;22201;22202;22203 15649;15650;15651;15652 15651 1202 4 128700 0 LLLQINPER SLSPATTGALISHEKLLLQINPERELGSMS LISHEKLLLQINPERELGSMSYKLGQVSIH K L L E R E 0 1 1 0 0 1 1 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 9 0 1094.6448 P42858 P42858 2597 2605 HTT Huntingtin yes yes 2 0.0023314 126.24 By MS/MS 2 0.816 1 1 1 3 811840 811840 0 8929 858 9231 22204;22205;22206 15653;15654 15653 2 36700 0 LLLQLEATK AAINLTDPDGALAKRLLLQLEATKNSKGGS GALAKRLLLQLEATKNSKGGSGGKTTGTPP R L L T K N 1 0 0 0 0 1 1 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 9 0 1027.6277 Q13561 Q13561 177 185 DCTN2 Dynactin subunit 2 yes yes 2 0.00095945 143.03 By MS/MS 5.5 0.5 1 1 2 5554500 5554500 0 8930 1382 9232 22207;22208 15655 15655 1 50982 0 LLLQQNK GVFCSGHNEAVSHYKLLLQQNKKFQNLIKK NEAVSHYKLLLQQNKKFQNLIKKIGNFSIV K L L N K K 0 0 1 0 0 2 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 855.5178 Q6ZSZ5 Q6ZSZ5 566 572 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 2 0.011767 149.11 By MS/MS 5 0 1 1 1518400 1518400 0 8931 1747 9233 22209 15656 15656 1 62412 0 LLLQVQHASK AAISKTAVAPIERVKLLLQVQHASKQITAD IERVKLLLQVQHASKQITADKQYKGIIDCV K L L S K Q 1 0 0 0 0 2 0 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1135.6713 P05141;P12235;P12236 P05141 34 43 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 6.6408E-05 169.44 By MS/MS By MS/MS 5.23 3.12 4 3 3 2 2 2 1 4 2 3 23 3 295200000 294140000 1065600 8932 469;563;562 9234 22210;22211;22212;22213;22214;22215;22216;22217;22218;22219;22220;22221;22222;22223;22224;22225;22226;22227;22228;22229;22230;22231;22232;22233;22234;22235 15657;15658;15659;15660;15661;15662;15663;15664;15665;15666;15667;15668 15664 12 25735000 8397800 LLLSEQLSR TPSIIYHCALRGLERLLLSEQLSRLDAESL LRGLERLLLSEQLSRLDAESLVKLSVDRVN R L L S R L 0 1 0 0 0 1 1 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 9 0 1057.6132 P42858 P42858 2885 2893 HTT Huntingtin yes yes 2 1.2916E-06 191.17 By MS/MS 1.5 0.5 1 1 2 698660 698660 0 8933 858 9235 22236;22237 15669 15669 1 34208 0 LLLSGTADGADLR DQDDLENPMLETASKLLLSGTADGADLRTV SKLLLSGTADGADLRTVDPETQARLEALLE K L L L R T 2 1 0 2 0 0 0 2 0 0 4 0 0 0 0 1 1 0 0 0 0 0 13 0 1300.6987 O75179 O75179 153 165 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 1.7828E-17 215.87 By MS/MS 2.5 0.5 1 1 2 927900 927900 0 8934 290 9236 22238;22239 15670 15670 1 27889 0 LLLSSETPIEGK YKGLFEVNPWKREVKLLLSSETPIEGKNMS EVKLLLSSETPIEGKNMSFVNDLTVTQDGR K L L G K N 0 0 0 0 0 0 2 1 0 1 3 1 0 0 1 2 1 0 0 0 0 0 12 0 1285.7129 Q9HDC9 Q9HDC9 184 195 APMAP Adipocyte plasma membrane-associated protein yes yes 2 0.0057145 99.973 By MS/MS 7 0 1 1 0 0 0 8935 2570 9237 22240 15671 15671 1 0 0 LLLTPWVK LSAVSGEDTQDRTDRLLLTPWVKFLWESYR TQDRTDRLLLTPWVKFLWESYRQCLDLLRN R L L V K F 0 0 0 0 0 0 0 0 0 0 3 1 0 0 1 0 1 1 0 1 0 0 8 0 968.60589 Q14152 Q14152 144 151 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.006343 132.09 By MS/MS 4.5 1.12 1 1 1 1 4 5081300 5081300 0 8936 1409 9238 22241;22242;22243;22244 15672;15673;15674 15673 3 117570 0 LLLVLNK VASVGAQSPSDSSQRLLLVLNKSDLLSPEG SPSDSSQRLLLVLNKSDLLSPEGPGPGPDL R L L N K S 0 0 1 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 7 0 811.55312 Q969Y2 Q969Y2 369 375 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 0.02164 121.87 By MS/MS 6.5 0.5 1 1 2 1519000 1519000 0 8937 2111 9239 22245;22246 15675 15675 1 19662 0 LLLWAQNELDQK YENRESTPKLAKLLKLLLWAQNELDQKKVK LLKLLLWAQNELDQKKVKYPKMTDLSKGVI K L L Q K K 1 0 1 1 0 2 1 0 0 0 4 1 0 0 0 0 0 1 0 0 0 0 12 0 1469.7878 Q9NWU2 Q9NWU2 198 209 GID8 Glucose-induced degradation protein 8 homolog yes yes 2 7.6444E-11 198.62 By MS/MS 8 0 1 1 835480 835480 0 8938 2669 9240 22247 15676 15676 1 55117 0 LLMLGLDNAGK LTILKKMKQKERELRLLMLGLDNAGKTTIL RELRLLMLGLDNAGKTTILKKFNGEDIDTI R L L G K T 1 0 1 1 0 0 0 2 0 0 4 1 1 0 0 0 0 0 0 0 0 0 11 0 1143.6322 P36404 P36404 19 29 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 0.00017 152.97 By MS/MS 9 0.816 1 1 1 3 2805300 2805300 0 8939 802 9241 22248;22249;22250 15677;15678 15677 550 2 2006400 0 LLMMAGIDDCYTSAR APRGTGIVSAPVPKKLLMMAGIDDCYTSAR LLMMAGIDDCYTSARGCTATLGNFAKATFD K L L A R G 2 1 0 2 1 0 0 1 0 1 2 0 2 0 0 1 1 0 1 0 0 0 15 0 1715.7681 P15880 P15880 213 227 RPS2 40S ribosomal protein S2 yes yes 2 2.2923E-05 136.7 By MS/MS 8 0 1 1 1045300 1045300 0 8940 602 9242 22251 15679 15679 386;387 1 68958 0 LLMSEDYFTQAMEVK QNIVFNAETYSNLIKLLMSEDYFTQAMEVK LLMSEDYFTQAMEVKAFAETHIKGFTLNDA K L L V K A 1 0 0 1 0 1 2 0 0 0 2 1 2 1 0 1 1 0 1 1 0 0 15 0 1803.8423 P42704 P42704 1076 1090 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 2.2623E-109 359.9 By MS/MS By MS/MS 3.25 1.09 1 1 6 2 2 11 1 30666000 30611000 54799 8941 854 9243;9244;9245 22252;22253;22254;22255;22256;22257;22258;22259;22260;22261;22262;22263 15680;15681;15682;15683;15684;15685;15686 15684 608;609 7 809960 78537 LLNDEDPVVVTK DDAELATRALPELTKLLNDEDPVVVTKAAM LTKLLNDEDPVVVTKAAMIVNQLSKKEASR K L L T K A 0 0 1 2 0 0 1 0 0 0 2 1 0 0 1 0 1 0 0 3 0 0 12 0 1340.7187 P14923 P14923 150 161 JUP Junction plakoglobin yes yes 2 0.00018128 153.54 By MS/MS 5 0 1 1 2447400 2447400 0 8942 595 9246 22264 15687 15687 1 100600 0 LLNDEDQVVVNK DDAELATRAIPELTKLLNDEDQVVVNKAAV LTKLLNDEDQVVVNKAAVMVHQLSKKEASR K L L N K A 0 0 2 2 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 3 0 0 12 0 1384.7198 P35222 P35222 159 170 CTNNB1 Catenin beta-1 yes yes 2 5.7473E-07 178.54 By MS/MS 4.5 0.5 1 1 2 1081900 1081900 0 8943 781 9247 22265;22266 15688 15688 1 31992 0 LLNENSYVPR LSEKLDSTDFTGTIKLLNENSYVPREAGSQ TGTIKLLNENSYVPREAGSQKDENLALYVE K L L P R E 0 1 2 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 10 0 1203.6248 P02786 P02786 146 155 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.00027001 153.97 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 4126500 4101700 24836 8944 437 9248 22267;22268;22269;22270;22271 15689;15690 15689 2 95077 51896 LLNFLMK ATPTGVPKDEVLANRLLNFLMKHVFHPKRA KDEVLANRLLNFLMKHVFHPKRAVFRHNLE R L L M K H 0 0 1 0 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 7 0 877.50955 P78527 P78527 2215 2221 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.012109 132.72 By MS/MS 2 0.816 1 1 1 3 1731900 1731900 0 8945 1197 9249 22272;22273;22274 15691;15692 15691 960 2 82243 0 LLNFPTIVER SVVVFDTAPTGHTLRLLNFPTIVERGLGRL GHTLRLLNFPTIVERGLGRLMQIKNQISPF R L L E R G 0 1 1 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 0 1 0 0 10 0 1200.6867 O43681 O43681 176 185 ASNA1 ATPase ASNA1 yes yes 2 0.031144 98.04 By MS/MS 7.5 0.5 1 1 2 927940 927940 0 8946 214 9250 22275;22276 15693 15693 1 20962 0 LLNGPGDVETGTSITVPQKK QAELKKKDEEFQRTKLLNGPGDVETGTSIT GDVETGTSITVPQKKWLHFISPIFVQALTL K L L K K W 0 0 1 1 0 1 1 3 0 1 2 2 0 0 2 1 3 0 0 2 0 0 20 1 2053.1055 Q9HC07 Q9HC07 209 228 TMEM165 Transmembrane protein 165 yes yes 3 0.0065024 73.809 By MS/MS 3 1.41 1 1 1 1 1 5 3981100 3981100 0 8947 2555 9251 22277;22278;22279;22280;22281 15694;15695 15694 2 153450 0 LLNIRPPPR SMMCNEQAYSLAVEKLLNIRPPPRAQWIRV SLAVEKLLNIRPPPRAQWIRVLFGEITRLL K L L P R A 0 2 1 0 0 0 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 0 9 1 1074.6662 O75306 O75306 158 166 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.050411 130.77 By MS/MS 7 0 1 1 632680 632680 0 8948 294 9252 22282 15696 15696 1 11306 0 LLNLEGFPSGSQSR VHNITKLIKMSETHKLLNLEGFPSGSQSRL KLLNLEGFPSGSQSRLSGTLKSQARRTRGT K L L S R L 0 1 1 0 0 1 1 2 0 0 3 0 0 1 1 3 0 0 0 0 0 0 14 0 1503.7682 Q8IYB8 Q8IYB8 685 698 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00073006 128.57 By MS/MS 5 0 1 1 817870 817870 0 8949 1879 9253 22283 15697 15697 1 33618 0 LLNLLADLVER LGSPWRRMDASERGRLLNLLADLVERDRVY ERGRLLNLLADLVERDRVYLASLETLDNGK R L L E R D 1 1 1 1 0 0 1 0 0 0 5 0 0 0 0 0 0 0 0 1 0 0 11 0 1267.75 P30837 P30837 104 114 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 3.5334E-16 223.87 By MS/MS 6 0 1 1 1172200 1172200 0 8950 747 9254 22284 15698 15698 1 9140.9 0 LLNLLADLVERDR LGSPWRRMDASERGRLLNLLADLVERDRVY GRLLNLLADLVERDRVYLASLETLDNGKPF R L L D R V 1 2 1 2 0 0 1 0 0 0 5 0 0 0 0 0 0 0 0 1 0 0 13 1 1538.878 P30837 P30837 104 116 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 3 0.033311 64.121 By MS/MS 6 0 1 1 564020 564020 0 8951 747 9255 22285 15699 15699 1 4398.3 0 LLNLLCR FLLGNVYEAFEHWKRLLNLLCRSEAAMMKH EAFEHWKRLLNLLCRSEAAMMKHHTLYINL R L L C R S 0 1 1 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 900.52151 Q9Y312 Q9Y312 277 283 AAR2 Protein AAR2 homolog yes yes 2 0.020749 124.32 By MS/MS 7 0 1 1 462380 462380 0 8952 2910 9256 22286 15700 15700 1 8262.9 0 LLNLYIK ELKPHLSQLTGSKMKLLNLYIKRAQTGSGG QLTGSKMKLLNLYIKRAQTGSGGADPTTDV K L L I K R 0 0 1 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 1 0 0 0 7 0 875.54804 O75122;Q7Z460 O75122 1269 1275 CLASP2;CLASP1 CLIP-associating protein 2;CLIP-associating protein 1 no no 2 0.023827 119.22 By MS/MS 3.5 0.5 1 1 2 810380 810380 0 8953 279;1790 9257 22287;22288 15701 15701 1 21418 0 LLNSELADALGGLLNR VPNWDCDYYDEKVVKLLNSELADALGGLLN LNSELADALGGLLNRCTAKRINPSETYPAF K L L N R C 2 1 2 1 0 0 1 2 0 0 6 0 0 0 0 1 0 0 0 0 0 0 16 0 1667.9206 Q96GW9 Q96GW9 394 409 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 0.0096734 127.79 By MS/MS 6 0 1 1 439010 439010 0 8954 2186 9258 22289 15702 15702 0 3423.5 0 LLNTFLER QSIYGGRVDNEFDQRLLNTFLERLFTTRSF DNEFDQRLLNTFLERLFTTRSFDSEFKLAC R L L E R L 0 1 1 0 0 0 1 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 8 0 1004.5655 Q14204 Q14204 4264 4271 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00024655 190.26 By MS/MS 3 1.41 1 1 1 1 1 5 3787400 3787400 0 8955 1421 9259 22290;22291;22292;22293;22294 15703;15704;15705;15706;15707 15703 5 161940 0 LLNTHHR AKTGAELVTCGSVLKLLNTHHRVRLHSHDI VTCGSVLKLLNTHHRVRLHSHDIKYGSGSG K L L H R V 0 1 1 0 0 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 889.48823 Q9HCN8 Q9HCN8 44 50 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 0.041051 107.32 By MS/MS 9.5 0.5 1 1 2 474330 474330 0 8956 2563 9260 22295;22296 15708 15708 1 278050 0 LLNTWTNR ISKQGNLSSQVPLKRLLNTWTNRYPDAKMD SQVPLKRLLNTWTNRYPDAKMDPMNIWDDI R L L N R Y 0 1 2 0 0 0 0 0 0 0 2 0 0 0 0 0 2 1 0 0 0 0 8 0 1016.5403 P78527 P78527 3160 3167 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0070591 129.42 By MS/MS 2 0.816 1 1 1 3 858770 858770 0 8957 1197 9261 22297;22298;22299 15709 15709 1 33957 0 LLPADALVNCDLLLR QEKMAYQKTVEQLRKLLPADALVNCDLLLR LLPADALVNCDLLLRDLNCNPNNKAKIGNK K L L L R D 2 1 1 2 1 0 0 0 0 0 6 0 0 0 1 0 0 0 0 1 0 0 15 0 1694.9389 O60343 O60343 1268 1282 TBC1D4 TBC1 domain family member 4 yes yes 2 0.0021836 128.54 By MS/MS 3.5 0.5 1 1 2 149890 149890 0 8958 246 9262 22300;22301 15710;15711 15710 2 3950.3 0 LLPAELPAKR QQPVGIRLLEEALLRLLPAELPAKRVRGKA EALLRLLPAELPAKRVRGKARLPPDVLRWV R L L K R V 2 1 0 0 0 0 1 0 0 0 3 1 0 0 2 0 0 0 0 0 0 0 10 1 1106.6812 P78527 P78527 2900 2909 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.052429 90.709 By MS/MS 2 0.816 1 1 1 3 1674800 1674800 0 8959 1197 9263 22302;22303;22304 15712 15712 0 67433 0 LLPALAAR LGLRRAARPRDALPRLLPALAARLAGPVPA PRDALPRLLPALAARLAGPVPARRPPEACE R L L A R L 3 1 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 8 0 823.52797 Q86Y56 Q86Y56 117 124 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 0.019239 107.74 By MS/MS 4.5 0.5 1 1 2 1406400 1406400 0 8960 1844 9264 22305;22306 15713 15713 1 50825 0 LLPDTINSINLDR KFSELVMKCLWRMVRLLPDTINSINLDRIL VRLLPDTINSINLDRILLDIHIFMKVFPKE R L L D R I 0 1 2 2 0 0 0 0 0 2 3 0 0 0 1 1 1 0 0 0 0 0 13 0 1482.8042 Q14008 Q14008 1719 1731 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 3.7819E-05 149.41 By MS/MS 3 0.816 1 1 1 3 1945900 1945900 0 8961 1405 9265 22307;22308;22309 15714 15714 1 81135 0 LLPEYPGVLSDVQEEK ESDTFFPEIDLEKYKLLPEYPGVLSDVQEE LPEYPGVLSDVQEEKGIKYKFEVYEKND__ K L L E K G 0 0 0 1 0 1 3 1 0 0 3 1 0 0 2 1 0 0 1 2 0 0 16 0 1814.9302 P00374 P00374 159 174 DHFR Dihydrofolate reductase yes yes 2 0.00079812 136.33 By MS/MS 9 0 1 1 3150400 3150400 0 8962 426 9266 22310 15715 15715 1 1808000 0 LLPLYFPR VVFAVSDLEEGTYQKLLPLYFPRSLKEENR EEGTYQKLLPLYFPRSLKEENRSLPYLPAD K L L P R S 0 1 0 0 0 0 0 0 0 0 3 0 0 1 2 0 0 0 1 0 0 0 8 0 1017.6011 Q9NXN4 Q9NXN4 218 225 GDAP2 Ganglioside-induced differentiation-associated protein 2 yes yes 2 0.022923 102.98 By MS/MS 6 0 1 1 954090 954090 0 8963 2690 9267 22311 15716 15716 1 7440 0 LLPQGLAVYASPENK RGDLVSVKKSLGRNRLLPQGLAVYASPENK LLPQGLAVYASPENKKLFEEEKLLRQEGKL R L L N K K 2 0 1 0 0 1 1 1 0 0 3 1 0 0 2 1 0 0 1 1 0 0 15 0 1598.8668 Q9BYD2 Q9BYD2 123 137 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.0046614 105.65 By MS/MS 8.5 0.5 1 1 2 1456900 1456900 0 8964 2413 9268 22312;22313 15717 15717 1 118150 0 LLPVLLSTAQEADPEVR TIQGLGAASAQFVSRLLPVLLSTAQEADPE PVLLSTAQEADPEVRSNAIFGMGVLAEHGG R L L V R S 2 1 0 1 0 1 2 0 0 0 4 0 0 0 2 1 1 0 0 2 0 0 17 0 1850.0149 Q8TEX9 Q8TEX9 900 916 IPO4 Importin-4 yes yes 2 1.7821E-18 203.29 By MS/MS 6 2 1 1 1 1 1 1 1 7 8408100 8408100 0 8965 2005 9269 22314;22315;22316;22317;22318;22319;22320 15718;15719;15720 15719 3 236260 0 LLQAFLER PVLWERTGNIPALVRLLQAFLERGSNTIAS NIPALVRLLQAFLERGSNTIASAAADKIPG R L L E R G 1 1 0 0 0 1 1 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 988.57057 P55060 P55060 707 714 CSE1L Exportin-2 yes yes 2 0.015297 112.84 By MS/MS 2.67 1.25 1 1 1 3 8640400 8640400 0 8966 1025 9270 22321;22322;22323 15721;15722 15722 2 236570 0 LLQASFK KFQAKLEHEYIHNFKLLQASFKRMNVDKVI HEYIHNFKLLQASFKRMNVDKVIPVEKLVK K L L F K R 1 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 7 0 805.46979 Q15555 Q15555 120 126 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.02098 123.69 By MS/MS 7 0 1 1 2886700 2886700 0 8967 1508 9271 22324 15723 15723 1 51585 0 LLQDANYNVEK QAGYVGEDIESVIAKLLQDANYNVEKAQQG VIAKLLQDANYNVEKAQQGIVFLDEVDKIG K L L E K A 1 0 2 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 11 0 1305.6565 O76031 O76031 339 349 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 6.6179E-16 215.72 By MS/MS By matching 5.8 0.748 2 2 1 3 2 26613000 26487000 125590 8968 344 9272 22325;22326;22327;22328;22329 15724;15725;15726 15724 3 586520 383450 LLQDFFNGK IVLVGGSTRIPKIQKLLQDFFNGKELNKSI IPKIQKLLQDFFNGKELNKSINPDEAVAYG K L L G K E 0 0 1 1 0 1 0 1 0 0 2 1 0 2 0 0 0 0 0 0 0 0 9 0 1080.5604 P11142;P54652;P17066 P11142 349 357 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 2 0.00081708 146.23 By MS/MS 6 0.816 1 1 1 3 19257000 19257000 0 8969 546;611 9273 22330;22331;22332 15727 15727 1 689850 0 LLQDFFNGKELNK IVLVGGSTRIPKIQKLLQDFFNGKELNKSI QKLLQDFFNGKELNKSINPDEAVAYGAAVQ K L L N K S 0 0 2 1 0 1 1 1 0 0 3 2 0 2 0 0 0 0 0 0 0 0 13 1 1564.8249 P11142;P54652;P17066 P11142 349 361 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 2 0.0013065 150.51 By MS/MS 5.5 0.5 1 1 2 2564100 2564100 0 8970 546;611 9274 22333;22334 15728 15728 1 71603 0 LLQDFFNGR LVLVGGSTRIPKVQKLLQDFFNGRDLNKSI IPKVQKLLQDFFNGRDLNKSINPDEAVAYG K L L G R D 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1108.5665 P0DMV9;P0DMV8 P0DMV9 349 357 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.001203 138.4 By MS/MS 6 0.816 1 1 1 3 12833000 12833000 0 8971 528 9275 22335;22336;22337 15729;15730;15731 15731 3 470780 0 LLQDYGLVVR TILKVGVGCSEDASKLLQDYGLVVRGCLDL EDASKLLQDYGLVVRGCLDLRYLAMRQRNN K L L V R G 0 1 0 1 0 1 0 1 0 0 3 0 0 0 0 0 0 0 1 2 0 0 10 0 1174.671 Q9NVH0 Q9NVH0 175 184 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 0.045359 112.36 By MS/MS 5 0 1 1 406580 406580 0 8972 2651 9276 22338 15732 15732 0 16712 0 LLQEAEQR SRQGKEGSMIDANLKLLQEAEQRLKAIVAE MIDANLKLLQEAEQRLKAIVAEKFAIATKE K L L Q R L 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 985.51926 Q9H9E3 Q9H9E3 187 194 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.0090117 122.13 By MS/MS 5 0 1 1 976440 976440 0 8973 2534 9277 22339 15733 15733 1 40136 0 LLQEAPGK TRQAPESPWEEQLARLLQEAPGKLSLDVEQ WEEQLARLLQEAPGKLSLDVEQAPSGQHSQ R L L G K L 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 8 0 854.48617 O00411 O00411 194 201 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0089976 122.19 By MS/MS By matching 3 0 2 1 1 4663400 4636000 27340 8974 92 9278 22340;22341 15734 15734 1 121020 39184 LLQEDSSPLLR ELARQTHGILEYYCRLLQEDSSPLLRCALC YYCRLLQEDSSPLLRCALCIGGMSVKEQME R L L L R C 0 1 0 1 0 1 1 0 0 0 4 0 0 0 1 2 0 0 0 0 0 0 11 0 1269.6929 Q9UJV9 Q9UJV9 283 293 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 2 0.0048019 113.93 By MS/MS 5 0 1 1 784110 784110 0 8975 2800 9279 22342 15735 15735 1 32230 0 LLQEEEQER SLSPSRCSEPPPVARLLQEEEQERRRPQSR PPPVARLLQEEEQERRRPQSRSQSFFAAAR R L L E R R 0 1 0 0 0 2 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1172.5673 O14654 O14654 1074 1082 IRS4 Insulin receptor substrate 4 yes yes 2 0.0010747 140.45 By MS/MS 3.4 1.85 1 1 1 1 1 5 3750700 3750700 0 8976 118 9280 22343;22344;22345;22346;22347 15736;15737;15738;15739 15739 4 97903 0 LLQEIVDQCMNR LQLEESTGSREQDVRLLQEIVDQCMNRSIA DVRLLQEIVDQCMNRSIALTQARYLEKEEK R L L N R S 0 1 1 1 1 2 1 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 12 0 1517.733 O15269 O15269 411 422 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 6.076E-07 177.57 By MS/MS By MS/MS 5.2 2.14 1 3 1 4 1 16429000 16398000 30873 8977 165 9281;9282 22348;22349;22350;22351;22352 15740;15741;15742;15743 15743 102 4 142190 94686 LLQFQDLTGIESMDQCR AAPEERDLTQEQTEKLLQFQDLTGIESMDQ QFQDLTGIESMDQCRHTLEQHNWNIEAAVQ K L L C R H 0 1 0 2 1 3 1 1 0 1 3 0 1 1 0 1 1 0 0 0 0 0 17 0 2052.9609 Q96CS3 Q96CS3 17 33 FAF2 FAS-associated factor 2 yes yes 2 1.3074E-44 280.5 By MS/MS 7.25 1.64 2 1 1 4 14613000 14613000 0 8978 2140 9283;9284 22353;22354;22355;22356 15744;15745;15746;15747 15744 1392 4 205260 0 LLQFYAETCPAPER ISGESGAGKTEATKRLLQFYAETCPAPERG RLLQFYAETCPAPERGGAVRDRLLQSNPVL R L L E R G 2 1 0 0 1 1 2 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 14 0 1693.8134 O00159 O00159 153 166 MYO1C Unconventional myosin-Ic yes yes 2 3.9533E-12 203.61 By MS/MS 4 0 1 1 2190400 2190400 0 8979 72 9285 22357 15748 15748 1 59796 0 LLQGKEPVIR GPHTHSPWFTSLVLRLLQGKEPVIRLVQSQ SLVLRLLQGKEPVIRLVQSQVARYPFHKQP R L L I R L 0 1 0 0 0 1 1 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 1 1151.7026 Q9BU23 Q9BU23 529 538 LMF2 Lipase maturation factor 2 yes yes 3 0.023708 77.533 By MS/MS 1.5 0.5 1 1 2 505740 505740 0 8980 2359 9286 22358;22359 15749 15749 1 24746 0 LLQHGINADDKR YGQYEGKVSSVALCKLLQHGINADDKRLQD LCKLLQHGINADDKRLQDIRVKGEEIYSMD K L L K R L 1 1 1 2 0 1 0 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1378.7317 Q96P70 Q96P70 866 877 IPO9 Importin-9 yes yes 3 0.014496 82.505 By MS/MS 4 0 1 1 986150 986150 0 8981 2237 9287 22360 15750 15750 1 26921 0 LLQIIER ALKLNSNEARLKFPRLLQIIERYPEETLSL EARLKFPRLLQIIERYPEETLSLMTKEISS R L L E R Y 0 1 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 7 0 883.5491 P78527 P78527 3468 3474 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.016463 136.11 By MS/MS 2.5 1.12 1 1 1 1 4 3023600 3023600 0 8982 1197 9288 22361;22362;22363;22364 15751;15752 15751 2 127700 0 LLQISSFNGK TVKNLEIFRLKMILRLLQISSFNGKMNALN KMILRLLQISSFNGKMNALNEVNKVISSVS R L L G K M 0 0 1 0 0 1 0 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 10 0 1105.6132 Q93008;O00507 Q93008 342 351 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.024714 89.08 By MS/MS 2 0.816 1 1 1 3 797360 797360 0 8983 2096 9289 22365;22366;22367 15753 15753 1 32217 0 LLQLLGR RLPVRAWADVRRESRLLQLLGRLPLFGLGR ADVRRESRLLQLLGRLPLFGLGRLVTRKSW R L L G R L 0 1 0 0 0 1 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 811.52797 P82930 P82930 64 70 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.025579 118.01 By MS/MS By matching 8 0 2 1 1 4427500 4403500 23979 8984 1209 9290 22368;22369 15754 15754 1 290500 204570 LLQLQEQMR EMRQMGQPCDAYQKRLLQLQEQMRALYKAI DAYQKRLLQLQEQMRALYKAISVPRVRRAS R L L M R A 0 1 0 0 0 3 1 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 9 0 1157.6227 P15924 P15924 142 150 DSP Desmoplakin yes yes 2 0.0018562 122.13 By MS/MS 2 0 2 2 504060 504060 0 8985 603 9291;9292 22370;22371 15755;15756 15755 389 2 25055 0 LLQLSCNGNVK PLTNFRSTIFYYVQKLLQLSCNGNVKSDKL YVQKLLQLSCNGNVKSDKLRRIWEPTYTIM K L L V K S 0 0 2 0 1 1 0 1 0 0 3 1 0 0 0 1 0 0 0 1 0 0 11 0 1244.6547 Q9ULT8 Q9ULT8 1850 1860 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0045003 109.83 By MS/MS 2 0 1 1 223740 223740 0 8986 2826 9293 22372 15757 15757 1 11121 0 LLQLVEDR LISVLREANQAINPKLLQLVEDRGSGRSRG NQAINPKLLQLVEDRGSGRSRGRGGMKDDR K L L D R G 0 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 984.5604 P17844 P17844 471 478 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.012619 110.87 By MS/MS 5.5 1.12 1 1 1 1 4 7266400 7266400 0 8987 616 9294 22373;22374;22375;22376 15758 15758 1 235230 0 LLQQCTTR ENTLVQNYAAQCIAKLLQQCTTRTPCPNSK AAQCIAKLLQQCTTRTPCPNSKIIKNLCSS K L L T R T 0 1 0 0 1 2 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 8 0 1018.523 O14981 O14981 904 911 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.01937 107.57 By MS/MS 2 0 1 1 292980 292980 0 8988 143 9295 22377 15759 15759 1 14563 0 LLQQEEEIK ______________________________ SECSARLLQQEEEIKSLTAEIDRLKNCGCL R L L I K S 0 0 0 0 0 2 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1128.6027 P54136 P54136 12 20 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 6.5224E-05 179.37 By MS/MS By matching 5.33 0.471 2 1 2 1 10675000 10624000 51218 8989 1013 9296 22378;22379;22380 15760 15760 1 413550 151550 LLQQGTAPAQAK AFVKALQQEQEIEQRLLQQGTAPAQAKAEP EQRLLQQGTAPAQAKAEPTAAPHPVLKQVI R L L A K A 3 0 0 0 0 3 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 12 0 1224.6826 Q86YP4 Q86YP4 476 487 GATAD2A Transcriptional repressor p66-alpha yes yes 2 0.00015708 163.66 By MS/MS By matching 5 0 2 1 1 2111200 2090700 20559 8990 1848 9297 22381;22382 15761 15761 1 85935 60833 LLQQLAMTGSEEGDPR PINEVARFNLMQVGRLLQQLAMTGSEEGDP LQQLAMTGSEEGDPRTKSSLGKFDKSCVAA R L L P R T 1 1 0 1 0 2 2 2 0 0 3 0 1 0 1 1 1 0 0 0 0 0 16 0 1743.8461 Q14C86 Q14C86 347 362 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 4.0583E-15 210.38 By MS/MS 2.5 0.5 1 1 2 547280 547280 0 8991 1455 9298 22383;22384 15762;15763 15762 2 20960 0 LLQSNPVLEAFGNAK ETCPAPERGGAVRDRLLQSNPVLEAFGNAK LLQSNPVLEAFGNAKTLRNDNSSRFGKYMD R L L A K T 2 0 2 0 0 1 1 1 0 0 3 1 0 1 1 1 0 0 0 1 0 0 15 0 1599.8621 O00159 O00159 174 188 MYO1C Unconventional myosin-Ic yes yes 2 0.00018251 149.82 By MS/MS 4 0 1 1 1861700 1861700 0 8992 72 9299 22385 15764 15764 1 50824 0 LLQSPCPFCDSPVF IARHPAPEDPDWIKRLLQSPCPFCDSPVF_ RLLQSPCPFCDSPVF_______________ R L L V F - 0 0 0 1 2 1 0 0 0 0 2 0 0 2 3 2 0 0 0 1 0 0 14 0 1665.7531 Q9UKN8 Q9UKN8 809 822 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2 0.0010978 121.61 By MS/MS 4.5 0.5 1 1 2 419130 419130 0 8993 2814 9300 22386;22387 15765 15765 1 15218 0 LLQTDDEEEAGLLELLK TWMNNFHTLLTLDNKLLQTDDEEEAGLLEL QTDDEEEAGLLELLKSQICDNAALYAQKYD K L L L K S 1 0 0 2 0 1 4 1 0 0 6 1 0 0 0 0 1 0 0 0 0 0 17 0 1927.999 P55060 P55060 252 268 CSE1L Exportin-2 yes yes 2;3 2.3641E-34 254.94 By MS/MS 4.4 1.02 1 2 1 1 5 4156300 4156300 0 8994 1025 9301 22388;22389;22390;22391;22392 15766;15767;15768;15769 15769 4 103210 0 LLQTGQER DALDKVVQEREDALRLLQTGQERARPGAWR EREDALRLLQTGQERARPGAWRRDIFGRII R L L E R A 0 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 943.50869 Q9HD33 Q9HD33 155 162 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 2 0.022124 104.01 By MS/MS By matching 9 0 2 1 1 5455300 5372800 82500 8995 2567 9302 22393;22394 15770 15770 1 3083500 889110 LLQVDPEAR EWDDRSSTVKDLISRLLQVDPEARLTAEQA KDLISRLLQVDPEARLTAEQALQHPFFERC R L L A R L 1 1 0 1 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 9 0 1039.5662 P15735 P15735 271 279 PHKG2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform yes yes 2 0.0098363 99.815 By MS/MS 7 0 1 1 2387200 2387200 0 8996 600 9303 22395 15771 15771 1 42660 0 LLQVGEEGPQAVAK TNLAPSLQLCQLGVKLLQVGEEGPQAVAKL KLLQVGEEGPQAVAKLLIKASAVLSKSMEA K L L A K L 2 0 0 0 0 2 2 2 0 0 2 1 0 0 1 0 0 0 0 2 0 0 14 0 1437.7827 Q14674 Q14674 300 313 ESPL1 Separin yes yes 2 0.0053165 115.57 By MS/MS 2.5 0.5 1 1 2 1097300 1097300 0 8997 1439 9304 22396;22397 15772 15772 1 35879 0 LLQVVEEPQALAAFLR VWSEKGQVEVFALRRLLQVVEEPQALAAFL LQVVEEPQALAAFLRDEQAQMKPIFSFAGH R L L L R D 3 1 0 0 0 2 2 0 0 0 4 0 0 1 1 0 0 0 0 2 0 0 16 0 1796.0196 Q9BQ67 Q9BQ67 183 198 GRWD1 Glutamate-rich WD repeat-containing protein 1 yes yes 2;3 2.2205E-07 166.38 By MS/MS 6 0 2 2 2961700 2961700 0 8998 2307 9305 22398;22399 15773;15774 15773 2 23095 0 LLQYCETGVK STDHGPQNHKAHLEKLLQYCETGVKEGATL AHLEKLLQYCETGVKEGATLVYGGRQVQRP K L L V K E 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 0 1 0 1 1 0 0 10 0 1209.6064 Q3SY69 Q3SY69 779 788 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.0013989 119.22 By MS/MS 4 0 1 1 1751300 1751300 0 8999 1570 9306 22400 15775 15775 1 47809 0 LLRDAQQNS IEEFKERLRKRREEKLLRDAQQNS______ KRREEKLLRDAQQNS_______________ K L L N S - 1 1 1 1 0 2 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 1 1043.536 P0DJ07 P0DJ07 65 73 PET100 Protein PET100 homolog, mitochondrial yes yes 2 0.012188 133.58 By MS/MS By matching 8.75 0.829 2 1 1 3 1 13504000 13458000 46536 9000 526 9307 22401;22402;22403;22404 15776 15776 1 1579800 397010 LLRDYQELMNTK DLEDALQQAKEDLARLLRDYQELMNTKLAL LARLLRDYQELMNTKLALDLEIATYRTLLE R L L T K L 0 1 1 1 0 1 1 0 0 0 3 1 1 0 0 0 1 0 1 0 0 0 12 1 1522.7814 P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 461 472 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.00086713 122.39 By MS/MS By MS/MS 5.09 3.03 2 1 1 1 1 1 1 1 1 1 3 8 8254200 3333100 4921100 + 9001 450;45;32 9308 22405;22406;22407;22408;22409;22410;22411;22412;22413;22414;22415 15777;15778;15779;15780;15781;15782;15783;15784;15785 15782 12 9 1517200 10367000 LLRDYQELMNVK DLEEALQQAKEDLARLLRDYQELMNVKLAL LARLLRDYQELMNVKLALDVEIATYRKLLE R L L V K L 0 1 1 1 0 1 1 0 0 0 3 1 1 0 0 0 0 0 1 1 0 0 12 1 1520.8021 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 459 470 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 3 0.0020516 107.97 By MS/MS By MS/MS 4.62 2.69 2 1 1 2 1 1 6 2 5693700 5510700 183030 + 9002 52 9309 22416;22417;22418;22419;22420;22421;22422;22423 15786;15787;15788;15789 15789 38 4 720410 347520 LLREAEESSK SLLNGTFDFQNDFLRLLREAEESSKIRAPT NDFLRLLREAEESSKIRAPTTMKKFEDSEK R L L S K I 1 1 0 0 0 0 3 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 1 1160.6037 P08240 P08240 120 129 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.043781 104.42 By MS/MS 5 0 1 1 345740 345740 0 9003 502 9310 22424 15790 15790 1 14211 0 LLRIDELQVVK SGPDADPSSLLQDCRLLRIDELQVVKTGGT QDCRLLRIDELQVVKTGGTPKVPDCFQRTP R L L V K T 0 1 0 1 0 1 1 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 11 1 1324.8078 O95071 O95071 710 720 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 4.1722E-05 163.12 By MS/MS 1 0 1 1 248550 248550 0 9004 364 9311 22425 15791 15791 1 12144 0 LLRLEGELTK SINVYDYNCHVDLIRLLRLEGELTKVRMAR VDLIRLLRLEGELTKVRMARQKMSEIFPLT R L L T K V 0 1 0 0 0 0 2 1 0 0 4 1 0 0 0 0 1 0 0 0 0 0 10 1 1170.6972 Q15020 Q15020 121 130 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 3 0.046167 67.08 By MS/MS 3 0 1 1 501700 501700 0 9005 1463 9312 22426 15792 15792 1 13097 0 LLSAACR GAQIPRDPSQQELPRLLSAACRLQLNGNLQ PSQQELPRLLSAACRLQLNGNLQLELAQVL R L L C R L 2 1 0 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 789.41671 P49327 P49327 1181 1187 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.019236 128.48 By MS/MS 2.5 1.12 1 1 1 1 4 19013000 19013000 0 9006 915 9313 22427;22428;22429;22430 15793;15794;15795 15795 3 841560 0 LLSAGATR DMADTCGTICHAADKLLSAGATRVYAILTH ICHAADKLLSAGATRVYAILTHGIFSGPAI K L L T R V 2 1 0 0 0 0 0 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 8 0 787.4552 P60891 P60891 236 243 PRPS1 Ribose-phosphate pyrophosphokinase 1 no no 2 0.014976 113.26 By MS/MS 8 0 1 1 2180100 2180100 0 9007 1076 9314 22431 15796 15796 1 143820 0 LLSAGQLLFQGR ______________________________ LRRLLSAGQLLFQGRALLVTNTLGCGALMA R L L G R A 1 1 0 0 0 2 0 2 0 0 4 0 0 1 0 1 0 0 0 0 0 0 12 0 1301.7456 Q567V2 Q567V2 12 23 MPV17L2 Mpv17-like protein 2 yes yes 2 4.9934E-08 194.12 By MS/MS 9 0 1 1 151480 151480 0 9008 1595 9315 22432 15797 15797 1 86934 0 LLSALCILPQPEDMNER AMDPAVPNMMIDAAKLLSALCILPQPEDMN SALCILPQPEDMNERVLEAMTERAEMDEVE K L L E R V 1 1 1 1 1 1 2 0 0 1 4 0 1 0 2 1 0 0 0 0 0 0 17 0 1997.9914 O60610 O60610 262 278 DIAPH1 Protein diaphanous homolog 1 yes yes 2 0.0071507 90.731 By MS/MS 2.5 0.5 1 1 2 318590 318590 0 9009 255 9316 22433;22434 15798;15799 15799 145 2 10528 0 LLSASPVDAAIR HTPVTSLAWAPSGGRLLSASPVDAAIRVWD GGRLLSASPVDAAIRVWDVSTETCVPLPWF R L L I R V 3 1 0 1 0 0 0 0 0 1 2 0 0 0 1 2 0 0 0 1 0 0 12 0 1211.6874 Q9NRG9 Q9NRG9 259 270 AAAS Aladin yes yes 2 0.012335 94.409 By MS/MS 7 0.816 1 1 1 3 7642500 7642500 0 9010 2606 9317 22435;22436;22437 15800 15800 1 84968 0 LLSCSADGTLR TDAVWGLAYSAAHQRLLSCSADGTLRLWNT AHQRLLSCSADGTLRLWNTTEVAPALSVFN R L L L R L 1 1 0 1 1 0 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1191.5918 O43815 O43815 584 594 STRN Striatin yes yes 2 0.00023645 160.75 By MS/MS 4 0 1 1 0 0 0 9011 225 9318 22438 15801 15801 1 0 0 LLSDFLDSEVSELR SKEVEETATAKNVLKLLSDFLDSEVSELRT KLLSDFLDSEVSELRTGAAEGLAKLMFSGL K L L L R T 0 1 0 2 0 0 2 0 0 0 4 0 0 1 0 3 0 0 0 1 0 0 14 0 1621.8199 Q9BPX3 Q9BPX3 695 708 NCAPG Condensin complex subunit 3 yes yes 2 4.1823E-18 223.77 By MS/MS 4 0 1 1 1073500 1073500 0 9012 2302 9319 22439 15802 15802 1 29305 0 LLSDLSAFGGAAR ______________________________ LRLLSDLSAFGGAARLRELVAGDSAVRVRG R L L A R L 3 1 0 1 0 0 0 2 0 0 3 0 0 1 0 2 0 0 0 0 0 0 13 0 1276.6776 Q86YV9 Q86YV9 9 21 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 3.8524E-25 235.01 By MS/MS 5 0 1 1 1467100 1467100 0 9013 1850 9320 22440 15803;15804 15803 2 60306 0 LLSDPNYGVHLPAVK EGRLVHIIGALRTSKLLSDPNYGVHLPAVK LLSDPNYGVHLPAVKLRRHVEMYQWVETEE K L L V K L 1 0 1 1 0 0 0 1 1 0 3 1 0 0 2 1 0 0 1 2 0 0 15 0 1621.8828 Q9BTV4 Q9BTV4 100 114 TMEM43 Transmembrane protein 43 yes yes 3 0.016333 76.073 By MS/MS 7 0 1 1 740630 740630 0 9014 2353 9321 22441 15805 15805 1 13235 0 LLSDSDLNVLMK KADILRSLSTEQLFRLLSDSDLNVLMKTLG LFRLLSDSDLNVLMKTLGLLRNLLSTRPHI R L L M K T 0 0 1 2 0 0 0 0 0 0 4 1 1 0 0 2 0 0 0 1 0 0 12 0 1346.7116 Q8IUR7 Q8IUR7 519 530 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 7.3984E-05 160.77 By MS/MS 5 0 1 1 266800 266800 0 9015 1854 9322 22442 15806 15806 1 10967 0 LLSDSLPPSTGTFQEAQSR DVDNALRAVGDASKRLLSDSLPPSTGTFQE SLPPSTGTFQEAQSRLNEAAAGLNQAATEL R L L S R L 1 1 0 1 0 2 1 1 0 0 3 0 0 1 2 4 2 0 0 0 0 0 19 0 2033.0065 Q9Y490 Q9Y490 1223 1241 TLN1 Talin-1 yes yes 2 0.00035859 146.67 By MS/MS 2 0 1 1 336280 336280 0 9016 2947 9323 22443 15807 15807 1 16715 0 LLSEGADVNAK LLEAARANNMQEVSRLLSEGADVNAKHRLG EVSRLLSEGADVNAKHRLGWTALMVAAINR R L L A K H 2 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1115.5823 Q9H078 Q9H078 153 163 CLPB Caseinolytic peptidase B protein homolog yes yes 2 9.4644E-05 162.64 By MS/MS By matching 7.33 1.89 2 1 2 1 37500000 37453000 47716 9017 2448 9324 22444;22445;22446 15808;15809 15808 2 503520 146340 LLSESAQPLK SKRRRPQPYPYPSKKLLSESAQPLKKVEEE YPSKKLLSESAQPLKKVEEEQEADEEDVSE K L L L K K 1 0 0 0 0 1 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1084.6128 Q9H3N1 Q9H3N1 224 233 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.008385 126.24 By MS/MS 8 0 1 1 0 0 0 9018 2489 9325 22447 15810 15810 1 0 0 LLSEVKK VLSGGSTLFKGFGDRLLSEVKKLAPKDVKI LFKGFGDRLLSEVKKLAPKDVKIRISAPQE R L L K K L 0 0 0 0 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 7 1 815.51165 P42025;P61163 P61163 314 320 ACTR1B;ACTR1A Beta-centractin;Alpha-centractin no no 2 0.045147 149.4 By MS/MS By matching 7 0 2 1 1 8842400 8831900 10462 9019 1090;843 9326 22448;22449 15811 15811 1 157830 42947 LLSGNLALR LSAAYACGGVEFYEKLLSGNLALRSLLGKD VEFYEKLLSGNLALRSLLGKDGEKLYTPSG K L L L R S 1 1 1 0 0 0 0 1 0 0 4 0 0 0 0 1 0 0 0 0 0 0 9 0 955.58147 Q53S58 Q53S58 253 261 TMEM177 Transmembrane protein 177 yes yes 2 8.5955E-05 171.53 By MS/MS By matching 5.33 3.09 1 1 1 2 1 2284900 2272400 12505 9020 1591 9327 22450;22451;22452 15812;15813 15813 2 146360 51334 LLSIFESR AADASPSLNREEVMKLLSIFESRLSFLLLQ NREEVMKLLSIFESRLSFLLLQSIKLLSST K L L S R L 0 1 0 0 0 0 1 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 8 0 963.53893 Q3B7T1 Q3B7T1 1155 1162 EDRF1 Erythroid differentiation-related factor 1 yes yes 2 0.03644 107.29 By MS/MS 3 0 1 1 320320 320320 0 9021 1566 9328 22453 15814 15814 1 8362 0 LLSIVNVCK KHALQRDIFTPNDERLLSIVNVCKAGKKKK TPNDERLLSIVNVCKAGKKKKNCFLCATVT R L L C K A 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 9 0 1044.6002 Q9NV70 Q9NV70 20 28 EXOC1 Exocyst complex component 1 yes yes 2 0.0011891 138.54 By MS/MS 4 0 1 1 864410 864410 0 9022 2645 9329 22454 15815 15815 1 23597 0 LLSLEMANKK QNVPGIEKVDDVVKRLLSLEMANKKEMLKI DVVKRLLSLEMANKKEMLKIKQEQFMKKIV R L L K K E 1 0 1 0 0 0 1 0 0 0 3 2 1 0 0 1 0 0 0 0 0 0 10 1 1145.6478 P82914 P82914 92 101 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.0093328 113.71 By MS/MS 9 0 1 1 269240 269240 0 9023 1207 9330 22455 15816 15816 991 1 154520 0 LLSLLPLSCQK GRSLNPATIYPVLPKLLSLLPLSCQKRLHC VLPKLLSLLPLSCQKRLHCRSYGQDHLDTG K L L Q K R 0 0 0 0 1 1 0 0 0 0 5 1 0 0 1 2 0 0 0 0 0 0 11 0 1270.7319 Q9Y289 Q9Y289 569 579 SLC5A6 Sodium-dependent multivitamin transporter yes yes 2 0.022323 87.258 By MS/MS 1 0 1 1 74223 74223 0 9024 2878 9331 22456 15817 15817 1 3626.4 0 LLSMAYSAVGK NGLTKLINEYKEDPKLLSMAYSAVGKLSSR EDPKLLSMAYSAVGKLSSRMPHLFTKDIAL K L L G K L 2 0 0 0 0 0 0 1 0 0 2 1 1 0 0 2 0 0 1 1 0 0 11 0 1138.6056 Q5VYK3 Q5VYK3 415 425 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00058713 135.55 By MS/MS 3 0 1 1 843250 843250 0 9025 1657 9332 22457 15818 15818 1203 1 22013 0 LLSMGQLDLLR MPHIEAQQRAVAINRLLSMGQLDLLRSNTG AINRLLSMGQLDLLRSNTGLLYRIKDSQNA R L L L R S 0 1 0 1 0 1 0 1 0 0 5 0 1 0 0 1 0 0 0 0 0 0 11 0 1257.7115 Q9H1D9 Q9H1D9 57 67 POLR3F DNA-directed RNA polymerase III subunit RPC6 yes yes 2 0.00011098 156.48 By MS/MS 8 0 1 1 790090 790090 0 9026 2465 9333 22458 15819 15819 1509 1 52122 0 LLSNSSSLWR QGPHLRHTGQIGGLKLLSNSSSLWRSSGAP IGGLKLLSNSSSLWRSSGAPETLQRVSGIS K L L W R S 0 1 1 0 0 0 0 0 0 0 3 0 0 0 0 4 0 1 0 0 0 0 10 0 1161.6142 Q9BW92 Q9BW92 256 265 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 9.617E-05 166.07 By MS/MS 6 0.816 1 1 1 3 8166400 8166400 0 9027 2391 9334 22459;22460;22461 15820 15820 1 194360 0 LLSPQMSGEEEDSDLAAK EVQQTPKRHSLSSTKLLSPQMSGEEEDSDL PQMSGEEEDSDLAAKLGMCNREIVRRGALI K L L A K L 2 0 0 2 0 1 3 1 0 0 3 1 1 0 1 3 0 0 0 0 0 0 18 0 1918.883 P42858 P42858 1868 1885 HTT Huntingtin yes yes 2 3.4197E-07 151.56 By MS/MS 1.5 0.5 1 1 2 486340 486340 0 9028 858 9335 22462;22463 15821 15821 1 23882 0 LLSPVVPQISAPQSNK DLAKNADKVLELMNKLLSPVVPQISAPQSN LSPVVPQISAPQSNKERLKNMALSIAERYR K L L N K E 1 0 1 0 0 2 0 0 0 1 2 1 0 0 3 3 0 0 0 2 0 0 16 0 1676.9461 Q8N1F7 Q8N1F7 645 660 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.00020147 132.5 By MS/MS 4.5 0.5 1 1 2 1539800 1539800 0 9029 1898 9336 22464;22465 15822 15822 1 57628 0 LLSQCMEYFDLR PLWSPTSIMRGVNQRLLSQCMEYFDLRCQL NQRLLSQCMEYFDLRCQLLDDLTTSEMEQL R L L L R C 0 1 0 1 1 1 1 0 0 0 3 0 1 1 0 1 0 0 1 0 0 0 12 0 1573.7269 Q9UPU5 Q9UPU5 1504 1515 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.00095084 128.88 By MS/MS 2 0 1 1 145530 145530 0 9030 2854 9337 22466 15823 15823 1639 1 7233.5 0 LLSQEPSNGISSDPTVFLDR CLSELCSVQVMALKKLLSQEPSNGISSDPT PSNGISSDPTVFLDRLAVIFRHTNPIVENG K L L D R L 0 1 1 2 0 1 1 1 0 1 3 0 0 1 2 4 1 0 0 1 0 0 20 0 2174.0855 Q9Y5L0 Q9Y5L0 595 614 TNPO3 Transportin-3 yes yes 2 6.8033E-08 144.97 By MS/MS 4 0 1 1 605740 605740 0 9031 2974 9338 22467 15824 15824 1 16536 0 LLSQPCASDR IADKEVTIKVPAGTRLLSQPCASDRFIQTL PAGTRLLSQPCASDRFIQTLSHKQLQAEMM R L L D R F 1 1 0 1 1 1 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1145.5499 A3KMH1 A3KMH1 411 420 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00057811 141.91 By MS/MS 3 0.816 1 1 1 3 2624700 2624700 0 9032 13 9339 22468;22469;22470 15825;15826 15825 2 103220 0 LLSRPQDALEGVVLSPSLEAR TVLEALRHPIQVSRRLLSRPQDALEGVVLS DALEGVVLSPSLEARVRDIAIATRNTKKNR R L L A R V 2 2 0 1 0 1 2 1 0 0 5 0 0 0 2 3 0 0 0 2 0 0 21 1 2249.2379 Q9NVI7 Q9NVI7 355 375 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2;3 0.00019242 121.45 By MS/MS 5.67 0.471 1 2 3 16055000 16055000 0 9033 2655 9340 22471;22472;22473 15827;15828 15828 2 128040 0 LLSSGFDIDTPDDFGR LHLAALSGFSDCCRKLLSSGFDIDTPDDFG LSSGFDIDTPDDFGRTCLHAAAAGGNLECL K L L G R T 0 1 0 4 0 0 0 2 0 1 2 0 0 2 1 2 1 0 0 0 0 0 16 0 1753.8159 O15084 O15084 391 406 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 7.51E-09 210.93 By MS/MS 4 0 1 1 336540 336540 0 9034 147 9341 22474 15829 15829 1 9187.1 0 LLSSYLQK AELLRFPERSTEIGKLLSSYLQKKSDVEDH RSTEIGKLLSSYLQKKSDVEDHSVHLLFSA K L L Q K K 0 0 0 0 0 1 0 0 0 0 3 1 0 0 0 2 0 0 1 0 0 0 8 0 950.54368 P23919 P23919 52 59 DTYMK Thymidylate kinase yes yes 2 0.0079015 126.28 By MS/MS 9 0 1 1 840580 840580 0 9035 675 9342 22475 15830 15830 1 482420 0 LLSTSPALQGTPASR LLAANVATLGLLMARLLSTSPALQGTPASR LLSTSPALQGTPASRGFFAAAILFLSQSHV R L L S R G 2 1 0 0 0 1 0 1 0 0 3 0 0 0 2 3 2 0 0 0 0 0 15 0 1497.8151 Q9UBB6 Q9UBB6 579 593 NCDN Neurochondrin yes yes 2 1.0136E-09 179.59 By MS/MS 5.5 0.5 1 1 2 8503900 8503900 0 9036 2745 9343 22476;22477 15831 15831 1 324150 0 LLSVEGSTLR NAQVTTENQLKYLTRLLSVEGSTLREALTH KYLTRLLSVEGSTLREALTHRKIIAKGEEL R L L L R E 0 1 0 0 0 0 1 1 0 0 3 0 0 0 0 2 1 0 0 1 0 0 10 0 1073.6081 O00159 O00159 341 350 MYO1C Unconventional myosin-Ic yes yes 2 0.00097638 146.23 By MS/MS 4 0 1 1 6573200 6573200 0 9037 72 9344 22478 15832 15832 1 179440 0 LLSVNIR DKEALIAKCNDYRRRLLSVNIRVRADLRDN KCNDYRRRLLSVNIRVRADLRDNYSPGWKF R L L I R V 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 813.50724 P07814 P07814 1334 1340 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.019099 128.86 By MS/MS 3.5 1.12 1 1 1 1 4 5788300 5788300 0 9038 493 9345 22479;22480;22481;22482 15833 15833 1 154770 0 LLTATNLVTLPNSR LIAGQKSARLDLLYRLLTATNLVTLPNSRG RLLTATNLVTLPNSRGEHLLLFLVQTVARQ R L L S R G 1 1 2 0 0 0 0 0 0 0 4 0 0 0 1 1 3 0 0 1 0 0 14 0 1511.8671 O95071 O95071 1258 1271 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 9.5407E-06 168.83 By MS/MS 2 0.816 1 1 1 3 1120700 1120700 0 9039 364 9346 22483;22484;22485 15834;15835 15834 2 47072 0 LLTCIEPPQPR IKHIGTSAIMDLLLRLLTCIEPPQPRQDVL LLLRLLTCIEPPQPRQDVLNWLNEEKIIQR R L L P R Q 0 1 0 0 1 1 1 0 0 1 2 0 0 0 3 0 1 0 0 0 0 0 11 0 1322.7017 Q5H9R7 Q5H9R7 169 179 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 2 0.014499 94.309 By MS/MS 3.5 0.5 1 1 2 1144500 1144500 0 9040 1600 9347 22486;22487 15836 15836 1 30759 0 LLTDCNTETFQK APHEPLVVFVDNYIKLLTDCNTETFQKILD YIKLLTDCNTETFQKILDMKGLKRSEQSSM K L L Q K I 0 0 1 1 1 1 1 0 0 0 2 1 0 1 0 0 3 0 0 0 0 0 12 0 1468.6868 Q5VIR6 Q5VIR6 760 771 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 2.6605E-33 265.77 By MS/MS 4.5 0.5 1 1 2 2353400 2353400 0 9041 1645 9348 22488;22489 15837 15837 1 67873 0 LLTDDGNKWLYK SFVNGFVNAAFGQDKLLTDDGNKWLYKNKD QDKLLTDDGNKWLYKNKDHGMLSAAASLGM K L L Y K N 0 0 1 2 0 0 0 1 0 0 3 2 0 0 0 0 1 1 1 0 0 0 12 1 1464.7613 Q13200 Q13200 390 401 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.02211 74.962 By MS/MS 4 0 1 1 1303500 1303500 0 9042 1347 9349 22490 15838 15838 1 35585 0 LLTECPPMMDTEYTK SGNVEKKICAVGITKLLTECPPMMDTEYTK LLTECPPMMDTEYTKLWTPLLQSLIGLFEL K L L T K L 0 0 0 1 1 0 2 0 0 0 2 1 2 0 2 0 3 0 1 0 0 0 15 0 1827.8093 P55060 P55060 849 863 CSE1L Exportin-2 yes yes 2 0.047327 67.879 By MS/MS 4 0 1 1 855100 855100 0 9043 1025 9350 22491 15839 15839 1 23343 0 LLTEEGQK PETAVKFWAYEQYKKLLTEEGQKIGTFERF AYEQYKKLLTEEGQKIGTFERFISGSMAGA K L L Q K I 0 0 0 0 0 1 2 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 916.48656 Q6NUK1 Q6NUK1 278 285 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.018973 108.09 By MS/MS 7.5 0.5 1 1 2 10243000 10243000 0 9044 1690 9351 22492;22493 15840 15840 1 194850 0 LLTEEGQKIGTFER PETAVKFWAYEQYKKLLTEEGQKIGTFERF KLLTEEGQKIGTFERFISGSMAGATAQTFI K L L E R F 0 1 0 0 0 1 3 2 0 1 2 1 0 1 0 0 2 0 0 0 0 0 14 1 1619.8519 Q6NUK1 Q6NUK1 278 291 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.00033419 158.25 By MS/MS 7 0 1 1 3593500 3593500 0 9045 1690 9352 22494 15841 15841 1 64217 0 LLTEISSSWDGCQK SALSIVSSTQEADSRLLTEISSSWDGCQKY RLLTEISSSWDGCQKYFYRSLARHARLNAA R L L Q K Y 0 0 0 1 1 1 1 1 0 1 2 1 0 0 0 3 1 1 0 0 0 0 14 0 1622.761 Q9NU22 Q9NU22 4181 4194 MDN1 Midasin yes yes 2 0.00012199 145.28 By MS/MS 1.5 0.5 1 1 2 246450 246450 0 9046 2635 9353 22495;22496 15842 15842 1 12139 0 LLTFMGMAVENK DSLGLLHEQNMAKMRLLTFMGMAVENKEIS KMRLLTFMGMAVENKEISFDTMQQELQIGA R L L N K E 1 0 1 0 0 0 1 1 0 0 2 1 2 1 0 0 1 0 0 1 0 0 12 0 1352.6832 Q7L2H7 Q7L2H7 279 290 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 3.9899E-17 228.64 By MS/MS By MS/MS 7.88 1.05 4 2 1 1 6 2 8536200 8417600 118560 9047 1764 9354;9355 22497;22498;22499;22500;22501;22502;22503;22504 15843;15844;15845;15846;15847 15847 1250;1251 5 415900 766390 LLTFNPTYCALK LLKLCQPFCKPRSSRLLTFNPTYCALKELN SSRLLTFNPTYCALKELNDEERKIKNVHMR R L L L K E 1 0 1 0 1 0 0 0 0 0 3 1 0 1 1 0 2 0 1 0 0 0 12 0 1439.7483 Q14139 Q14139 457 468 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 3.3643E-05 169.58 By MS/MS 3 0 1 1 320080 320080 0 9048 1408 9356 22505 15848 15848 1 8355.6 0 LLTGELLPTDGMIR ALVGPNGAGKSTLLKLLTGELLPTDGMIRK KLLTGELLPTDGMIRKHSHVKIGRYHQHLQ K L L I R K 0 1 0 1 0 0 1 2 0 1 4 0 1 0 1 0 2 0 0 0 0 0 14 0 1527.8331 Q9UG63 Q9UG63 442 455 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 2.9502E-05 155.33 By MS/MS 5 0 1 1 2768000 2768000 0 9049 2771 9357 22506 15849 15849 1618 1 113780 0 LLTGELLPTDGMIRK ALVGPNGAGKSTLLKLLTGELLPTDGMIRK LLTGELLPTDGMIRKHSHVKIGRYHQHLQE K L L R K H 0 1 0 1 0 0 1 2 0 1 4 1 1 0 1 0 2 0 0 0 0 0 15 1 1655.928 Q9UG63 Q9UG63 442 456 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 3 0.02327 87.831 By MS/MS 5 0 1 1 1079000 1079000 0 9050 2771 9358 22507 15850 15850 1618 1 44352 0 LLTHHKDHFTK RQDLMNIAGTTLSSKLLTHHKDHFTKLAVE LSSKLLTHHKDHFTKLAVEAVLRLKGSGNL K L L T K L 0 0 0 1 0 0 0 0 3 0 2 2 0 1 0 0 2 0 0 0 0 0 11 1 1375.7361 P78371 P78371 171 181 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 5.7514E-06 181.87 By MS/MS 6 0 3 3 49971000 49971000 0 9051 1195 9359 22508;22509;22510 15851;15852;15853 15852 3 389680 0 LLTIGDANGEIQR GAGPCATVSVFPGARLLTIGDANGEIQRHA ARLLTIGDANGEIQRHAEQQALRLEVRAGP R L L Q R H 1 1 1 1 0 1 1 2 0 2 2 0 0 0 0 0 1 0 0 0 0 0 13 0 1398.7467 Q86X55 Q86X55 37 49 CARM1 Histone-arginine methyltransferase CARM1 yes yes 2 0.000326 161.93 By MS/MS 1 0 1 1 205790 205790 0 9052 1837 9360 22511 15854 15854 1 10055 0 LLTLFNPDLANNYK KGDIAHIYDIQTGNKLLTLFNPDLANNYKR KLLTLFNPDLANNYKRNCATFNPTDDLVLN K L L Y K R 1 0 3 1 0 0 0 0 0 0 4 1 0 1 1 0 1 0 1 0 0 0 14 0 1634.8668 Q9Y4B6 Q9Y4B6 1211 1224 VPRBP Protein VPRBP yes yes 2 0.00038474 135.1 By MS/MS 3 0 1 1 66457 66457 0 9053 2950 9361 22512 15855 15855 1 1734.9 0 LLTLIKEL LASERSTVDAEAVHKLLTLIKEL_______ DAEAVHKLLTLIKEL_______________ K L L E L - 0 0 0 0 0 0 1 0 0 1 4 1 0 0 0 0 1 0 0 0 0 0 8 1 941.61612 P52701 P52701 1353 1360 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.035355 137.9 By MS/MS 3 0 1 1 465300 465300 0 9054 989 9362 22513 15856 15856 1 12147 0 LLTPAEEVLTEEER AAGLCQLGFCPTKRKLLTPAEEVLTEEERT KLLTPAEEVLTEEERTLSRGALRDMLDQVY K L L E R T 1 1 0 0 0 0 5 0 0 0 3 0 0 0 1 0 2 0 0 1 0 0 14 0 1627.8305 Q9C0B7 Q9C0B7 239 252 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 2 0.00012348 145.09 By MS/MS 3.5 0.5 1 1 2 905440 905440 0 9055 2432 9363 22514;22515 15857 15857 1 24492 0 LLTQDEGPALVPGGR AILIRDPRTARMGWRLLTQDEGPALVPGGR LLTQDEGPALVPGGRLGDLWDYHQHRYLQG R L L G R L 1 1 0 1 0 1 1 3 0 0 3 0 0 0 2 0 1 0 0 1 0 0 15 0 1521.8151 Q5T440 Q5T440 198 212 IBA57 Putative transferase CAF17, mitochondrial yes yes 2 4.3206E-07 162.68 By MS/MS 8 0.816 1 1 1 3 3681400 3681400 0 9056 1625 9364 22516;22517;22518 15858 15858 1 336570 0 LLTSFLPAQLLR ATGNRWCSWSLSQARLLTSFLPAQLLRLYQ QARLLTSFLPAQLLRLYQLMLFTLPGTPVF R L L L R L 1 1 0 0 0 1 0 0 0 0 5 0 0 1 1 1 1 0 0 0 0 0 12 0 1370.8286 P08195 P08195 440 451 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 6.3034E-05 163.16 By MS/MS 5 0.816 1 1 1 3 715830 715830 0 9057 499 9365 22519;22520;22521 15859 15859 1 6874.2 0 LLTSGYLQR FNDQSTSDYLVVYLRLLTSGYLQRESKFFE LVVYLRLLTSGYLQRESKFFEHFIEGGRTV R L L Q R E 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 1 1 0 1 0 0 0 9 0 1049.5869 Q96FW1 Q96FW1 177 185 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 2 0.00086498 145.16 By MS/MS 8.5 0.5 1 1 2 2678800 2678800 0 9058 2173 9366 22522;22523 15860 15860 1 199670 0 LLTSQCGAAEEEFVQR LSDLDYMQFIRLLEKLLTSQCGAAEEEFVQ LTSQCGAAEEEFVQRFRRSVTLESKKQLIE K L L Q R F 2 1 0 0 1 2 3 1 0 0 2 0 0 1 0 1 1 0 0 1 0 0 16 0 1836.8676 P82933 P82933 228 243 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2;3 1.5781E-63 346.65 By MS/MS 7.33 0.471 2 1 3 37598000 37598000 0 9059 1211 9367 22524;22525;22526 15861;15862;15863 15861 3 732710 0 LLTSYGFIQCSER NGTSAALRETGVIEKLLTSYGFIQCSERQA EKLLTSYGFIQCSERQARLFFHCSQYNGNL K L L E R Q 0 1 0 0 1 1 1 1 0 1 2 0 0 1 0 2 1 0 1 0 0 0 13 0 1572.7606 O75534 O75534 33 45 CSDE1 Cold shock domain-containing protein E1 yes yes 2 1.1997E-17 221.55 By MS/MS 4.5 0.5 1 1 2 3042400 3042400 0 9060 316 9368 22527;22528 15864;15865;15866 15866 3 125050 0 LLTTIGK LLKNHDEESLECLCRLLTTIGKDLDFEKAK ESLECLCRLLTTIGKDLDFEKAKPRMDQYF R L L G K D 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 0 2 0 0 0 0 0 7 0 744.47454 Q04637;O43432 Q04637 938 944 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 0.023342 119.56 By MS/MS 2 0.816 1 1 1 3 9772700 9772700 0 9061 1264;200 9369 22529;22530;22531 15867 15867 1 448890 0 LLTTIGKDLDFEK LLKNHDEESLECLCRLLTTIGKDLDFEKAK CRLLTTIGKDLDFEKAKPRMDQYFNQMEKI R L L E K A 0 0 0 2 0 0 1 1 0 1 3 2 0 1 0 0 2 0 0 0 0 0 13 1 1491.8185 Q04637;O43432 Q04637 938 950 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2;3 0.010564 128.36 By MS/MS 3 1.22 1 2 2 2 1 8 3848200 3848200 0 9062 1264;200 9370 22532;22533;22534;22535;22536;22537;22538;22539 15868;15869;15870 15868 3 111730 0 LLTYEFVK LRPGVRHPLLGDLRKLLTYEFVKQKYLDYR LLGDLRKLLTYEFVKQKYLDYRRVPNSNPP K L L V K Q 0 0 0 0 0 0 1 0 0 0 2 1 0 1 0 0 1 0 1 1 0 0 8 0 1011.5641 Q9Y5V3 Q9Y5V3 606 613 MAGED1 Melanoma-associated antigen D1 yes yes 2 0.012155 116.9 By MS/MS 3.5 0.5 1 1 2 989960 989960 0 9063 2982 9371 22540;22541 15871 15871 1 26958 0 LLTYNAAR QHQVAHVATQLEAARLLTYNAARLLEAGKP TQLEAARLLTYNAARLLEAGKPFIKEASMA R L L A R L 2 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 8 0 920.50797 P45954 P45954 348 355 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.039336 95.531 By MS/MS By matching 7.33 0.471 2 1 2 1 11514000 11482000 31294 9064 871 9372 22542;22543;22544 15872 15872 1 249220 128470 LLVDSNNPK KTMKVLRCVCFFCSKLLVDSNNPKIKDILA CFFCSKLLVDSNNPKIKDILAKSKGQPKKR K L L P K I 0 0 2 1 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 9 0 998.53966 P24928 P24928 117 125 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.043156 83.647 By MS/MS 2 0 1 1 314110 314110 0 9065 681 9373 22545 15873 15873 1 15613 0 LLVDVDESTLSPEEQK NLPFLKPDDIQYFDKLLVDVDESTLSPEEQ LVDVDESTLSPEEQKERKIMKLLLKIKNGT K L L Q K E 0 0 0 2 0 1 3 0 0 0 3 1 0 0 1 2 1 0 0 2 0 0 16 0 1800.8993 O75533 O75533 478 493 SF3B1 Splicing factor 3B subunit 1 yes yes 2 3.9737E-11 194.24 By MS/MS 3 0 1 1 799590 799590 0 9066 315 9374 22546 15874 15874 1 20873 0 LLVDVDESTLSPEEQKER NLPFLKPDDIQYFDKLLVDVDESTLSPEEQ DVDESTLSPEEQKERKIMKLLLKIKNGTPP K L L E R K 0 1 0 2 0 1 4 0 0 0 3 1 0 0 1 2 1 0 0 2 0 0 18 1 2086.043 O75533 O75533 478 495 SF3B1 Splicing factor 3B subunit 1 yes yes 2 1.4391E-24 225.79 By MS/MS 3 0 1 1 882790 882790 0 9067 315 9375 22547 15875 15875 1 23045 0 LLVEGDNLR AVIHIDEQSGKEKYKLLVEGDNLRAVMATH GKEKYKLLVEGDNLRAVMATHGVKGTRTTS K L L L R A 0 1 1 1 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 9 0 1027.5662 O14802 O14802 1225 1233 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.0021118 128.61 By MS/MS 3 0 1 1 1726100 1726100 0 9068 128 9376 22548 15876 15876 1 45060 0 LLVGNDDVHIIAR QLSSSLPLQSRGRARLLVGNDDVHIIARSD ARLLVGNDDVHIIARSDDELLDDFFHDQST R L L A R S 1 1 1 2 0 0 0 1 1 2 2 0 0 0 0 0 0 0 0 2 0 0 13 0 1433.7991 Q7Z6Z7 Q7Z6Z7 2606 2618 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0050628 103.08 By MS/MS 1 0 1 1 138070 138070 0 9069 1803 9377 22549 15877 15877 1 6745.9 0 LLVGNKSDLTTK WLQEIDRYASENVNKLLVGNKSDLTTKKVV VNKLLVGNKSDLTTKKVVDNTTAKEFADSL K L L T K K 0 0 1 1 0 0 0 1 0 0 3 2 0 0 0 1 2 0 0 1 0 0 12 1 1287.7398 Q9H0U4;Q92928 Q9H0U4 117 128 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 2 3.7188E-06 180.66 By MS/MS 9 0 1 1 425130 425130 0 9070 2459 9378 22550 15878 15878 1 243980 0 LLVGVDEKLNPEDIKK EGGVDVGDVDAKAQKLLVGVDEKLNPEDIK LVGVDEKLNPEDIKKHLLVHAPEDKKEILA K L L K K H 0 0 1 2 0 0 2 1 0 1 3 3 0 0 1 0 0 0 0 2 0 0 16 2 1809.0248 P53396 P53396 152 167 ACLY ATP-citrate synthase yes yes 3 0.011718 81.632 By MS/MS 4.5 1.12 1 1 1 1 4 13875000 13875000 0 9071 1001 9379 22551;22552;22553;22554 15879 15879 1 359270 0 LLVLSALAEK AAPGASLGSGRVEEKLLVLSALAEKLLPEP RVEEKLLVLSALAEKLLPEPGGDRARGARE K L L E K L 2 0 0 0 0 0 1 0 0 0 4 1 0 0 0 1 0 0 0 1 0 0 10 0 1055.659 Q13395 Q13395 230 239 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.00092707 126.24 By MS/MS 2.67 1.25 1 1 1 3 722770 722770 0 9072 1362 9380 22555;22556;22557 15880;15881 15881 2 19712 0 LLVLYSGEDDELLQR EVQDLFEAQGNDRLKLLVLYSGEDDELLQR LLVLYSGEDDELLQRAAAGGLAMLTSMRPT K L L Q R A 0 1 0 2 0 1 2 1 0 0 5 0 0 0 0 1 0 0 1 1 0 0 15 0 1761.9149 Q9H3U1 Q9H3U1 822 836 UNC45A Protein unc-45 homolog A yes yes 2 2.3003E-07 184.03 By MS/MS 4.67 0.943 2 1 3 2987000 2987000 0 9073 2493 9381 22558;22559;22560 15882;15883;15884 15884 3 51214 0 LLVPILLPEK ______________________________ GPLKRLLVPILLPEKCYDQLFVQWDLLHVP R L L E K C 0 0 0 0 0 0 1 0 0 1 4 1 0 0 2 0 0 0 0 1 0 0 10 0 1133.7424 O75352 O75352 12 21 MPDU1 Mannose-P-dolichol utilization defect 1 protein yes yes 2 0.022528 90.601 By MS/MS 3 1.41 1 1 1 1 1 5 796000 796000 0 9074 299 9382 22561;22562;22563;22564;22565 15885;15886 15886 2 30564 0 LLVPLVPDLQDVAQLR MIMDSIAAFLVLPNRLLVPLVPDLQDVAQL LVPLVPDLQDVAQLRSPLPRGIIRIHLLAA R L L L R S 1 1 0 2 0 2 0 0 0 0 5 0 0 0 2 0 0 0 0 3 0 0 16 0 1788.0509 Q9BSJ8 Q9BSJ8 308 323 ESYT1 Extended synaptotagmin-1 yes yes 2;3 0.0001274 131.35 By MS/MS 6 0 2 2 1316900 1316900 0 9075 2339 9383 22566;22567 15887;15888 15888 2 10269 0 LLVPTQYVGAIIGK AGAPAKQQQVDIPLRLLVPTQYVGAIIGKE RLLVPTQYVGAIIGKEGATIRNITKQTQSK R L L G K E 1 0 0 0 0 1 0 2 0 2 2 1 0 0 1 0 1 0 1 2 0 0 14 0 1470.881 Q9NZI8 Q9NZI8 200 213 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.0038922 106.49 By MS/MS 5.5 0.5 1 1 2 483480 483480 0 9076 2711 9384 22568;22569 15889 15889 1 7010.8 0 LLVSASQDGK HLAKIYAMHWGTDSRLLVSASQDGKLIIWD GTDSRLLVSASQDGKLIIWDSYTTNKVHAI R L L G K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1016.5502 P62873;P16520;P62879;Q9HAV0 P62879 69 78 GNB1;GNB3;GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 no no 2 0.00064272 139.38 By MS/MS 8.5 0.5 1 1 2 12800000 12800000 0 9077 1156;1154 9385 22570;22571 15890 15890 1 915860 0 LLVTDMSDAEQYR KINKQHARRVYEILRLLVTDMSDAEQYRSY LRLLVTDMSDAEQYRSYRLDIKRRLISPYK R L L Y R S 1 1 0 2 0 1 1 0 0 0 2 0 1 0 0 1 1 0 1 1 0 0 13 0 1539.7239 O14929 O14929 337 349 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 4.3654E-35 263.11 By MS/MS 7 0 2 2 2205100 2205100 0 9078 134 9386;9387 22572;22573 15891;15892 15891 86 1 39406 0 LLVTELMR VTSEDKKFHETLEQRLLVTELMRLLGPSQE HETLEQRLLVTELMRLLGPSQEREIPPLLG R L L M R L 0 1 0 0 0 0 1 0 0 0 3 0 1 0 0 0 1 0 0 1 0 0 8 0 973.56304 Q9H6D7 Q9H6D7 119 126 HAUS4 HAUS augmin-like complex subunit 4 yes yes 2 0.014856 113.41 By MS/MS 7 0 1 1 189990 189990 0 9079 2508 9388 22574 15893 15893 1 3395.2 0 LLVVGITDPDPDIR VSQTAVQVVADVLSKLLVVGITDPDPDIRY KLLVVGITDPDPDIRYCVLASLDERFDAHL K L L I R Y 0 1 0 3 0 0 0 1 0 2 2 0 0 0 2 0 1 0 0 2 0 0 14 0 1521.8403 P42345 P42345 659 672 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00050319 160.18 By MS/MS 3.5 1.12 1 1 1 1 4 1292800 1292800 0 9080 849 9389 22575;22576;22577;22578 15894;15895;15896 15895 3 49134 0 LLWQDSR TLVLTLPTVAFLEDKLLWQDSRYRPLYPFS TVAFLEDKLLWQDSRYRPLYPFSLPYSDFP K L L S R Y 0 1 0 1 0 1 0 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 7 0 916.47667 Q9BYD3 Q9BYD3 273 279 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2 0.050113 101.33 By MS/MS 8 0 1 1 1078700 1078700 0 9081 2414 9390 22579 15897 15897 1 71164 0 LLYEALVDCK SDWNLTTEKKHTLLRLLYEALVDCKKSDAA HTLLRLLYEALVDCKKSDAASKVMVELLGS R L L C K K 1 0 0 1 1 0 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 10 0 1222.6268 Q7L2H7 Q7L2H7 167 176 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.00025506 154.56 By MS/MS 8 0.816 1 1 1 3 22939000 22939000 0 9082 1764 9391 22580;22581;22582 15898;15899 15898 2 606310 0 LLYEALVDCKK SDWNLTTEKKHTLLRLLYEALVDCKKSDAA TLLRLLYEALVDCKKSDAASKVMVELLGSY R L L K K S 1 0 0 1 1 0 1 0 0 0 3 2 0 0 0 0 0 0 1 1 0 0 11 1 1350.7217 Q7L2H7 Q7L2H7 167 177 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.011251 116.52 By MS/MS 7.5 0.5 1 1 2 10187000 10187000 0 9083 1764 9392 22583;22584 15900 15900 1 221460 0 LLYLGIR ______________________________ VGAFPMAKLLYLGIRQVSKPLANRIKEAAR K L L I R Q 0 1 0 0 0 0 0 1 0 1 3 0 0 0 0 0 0 0 1 0 0 0 7 0 846.53272 Q9H6K4 Q9H6K4 11 17 OPA3 Optic atrophy 3 protein yes yes 2 0.020123 126.05 By MS/MS 9.5 0.5 1 1 2 375540 375540 0 9084 2510 9393 22585;22586 15901;15902 15901 2 215520 0 LLYLLESTEDPVIIER DGSYDDVLNAEQLQKLLYLLESTEDPVIIE LYLLESTEDPVIIERALITLGNNAAFSVNQ K L L E R A 0 1 0 1 0 0 3 0 0 2 4 0 0 0 1 1 1 0 1 1 0 0 16 0 1902.035 Q8N2F6 Q8N2F6 101 116 ARMC10 Armadillo repeat-containing protein 10 yes yes 2 0.0012796 117.86 By MS/MS 8 0 1 1 145620 145620 0 9085 1904 9394 22587 15903 15903 1 9606.8 0 LLYNLEMEQMAK TKSSKQNVASEKQRRLLYNLEMEQMAKTAK QRRLLYNLEMEQMAKTAKALMEAVSHVQAP R L L A K T 1 0 1 0 0 1 2 0 0 0 3 1 2 0 0 0 0 0 1 0 0 0 12 0 1481.7258 Q9Y6D6;Q9Y6D5 Q9Y6D6 909 920 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.00056583 119.27 By MS/MS 2 0 1 1 140520 140520 0 9086 3003;3002 9395 22588 15904 15904 1730;1731 1 6984.4 0 LLYNNVSNFGR VGDRCYDEKMYDAAKLLYNNVSNFGRLAST DAAKLLYNNVSNFGRLASTLVHLGEYQAAV K L L G R L 0 1 3 0 0 0 0 1 0 0 2 0 0 1 0 1 0 0 1 1 0 0 11 0 1295.6622 Q00610 Q00610 1216 1226 CLTC Clathrin heavy chain 1 yes yes 2 5.2126E-11 208.63 By MS/MS By matching 2.6 1.02 1 1 2 1 4 1 2504600 2472600 31972 9087 1235 9396 22589;22590;22591;22592;22593 15905;15906;15907 15905 3 87514 45823 LLYPPETGLFLVR MPWFHGKITREQAERLLYPPETGLFLVRES ERLLYPPETGLFLVRESTNYPGDYTLCVSC R L L V R E 0 1 0 0 0 0 1 1 0 0 4 0 0 1 2 0 1 0 1 1 0 0 13 0 1516.8654 P41240 P41240 95 107 CSK Tyrosine-protein kinase CSK yes yes 2 0.0083903 97.472 By MS/MS 6 0 1 1 1300800 1300800 0 9088 839 9397 22594 15908 15908 1 10144 0 LLYTGDFSR VLGAAMFMIEIAGVKLLYTGDFSRQEDRHL EIAGVKLLYTGDFSRQEDRHLMAAEIPNIK K L L S R Q 0 1 0 1 0 0 0 1 0 0 2 0 0 1 0 1 1 0 1 0 0 0 9 0 1070.5397 Q9UKF6 Q9UKF6 174 182 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 2 0.015967 104.06 By MS/MS 5 0 1 1 1009800 1009800 0 9089 2811 9398 22595 15909 15909 1 41506 0 LMAFQPAPK VSCAAGVTISSVEKKLMAFQPAPKVIRCMT SSVEKKLMAFQPAPKVIRCMTNTPVVVQEG K L M P K V 2 0 0 0 0 1 0 0 0 0 1 1 1 1 2 0 0 0 0 0 0 0 9 0 1001.5368 Q96C36 Q96C36 108 116 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 0.0014149 136.11 By MS/MS By matching 8.6 0.8 3 1 1 4 1 16665000 16578000 87291 9090 2136 9399;9400 22596;22597;22598;22599;22600 15910;15911 15911 1388 2 1265300 744700 LMAKAIMDFR AHIAKVKMKFRFLGKLMAKAIMDFRLVDLP RFLGKLMAKAIMDFRLVDLPLGLPFYKWML K L M F R L 2 1 0 1 0 0 0 0 0 1 1 1 2 1 0 0 0 0 0 0 0 0 10 1 1194.6253 Q14669 Q14669 1703 1712 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 3 0.032238 74.173 By MS/MS 5 0 1 1 2596600 2596600 0 9091 1437 9401 22601 15912 15912 1 106730 0 LMDEAVLALR IVKGLAGHLKSNSPRLMDEAVLALRNLARQ SNSPRLMDEAVLALRNLARQCSDSSAMESL R L M L R N 2 1 0 1 0 0 1 0 0 0 3 0 1 0 0 0 0 0 0 1 0 0 10 0 1129.6165 Q92616 Q92616 314 323 GCN1L1 Translational activator GCN1 yes yes 2 1.3127E-06 178.94 By MS/MS 2 0.707 1 2 1 4 4493900 4493900 0 9092 2068 9402;9403 22602;22603;22604;22605 15913;15914;15915;15916;15917 15917 1347 5 203200 0 LMDLLGEGLKR EDKKKFKTRSGETVRLMDLLGEGLKRSMDK ETVRLMDLLGEGLKRSMDKLKEKERDKVLT R L M K R S 0 1 0 1 0 0 1 2 0 0 4 1 1 0 0 0 0 0 0 0 0 0 11 1 1243.6958 P54136 P54136 462 472 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.028713 92.611 By MS/MS 5 0 1 1 4321500 4321500 0 9093 1013 9404 22606 15918 15918 784 1 177630 0 LMDPPSNEAVLLSIR IKILRLGGIAYFLSRLMDPPSNEAVLLSIR LMDPPSNEAVLLSIRHLMELNALDKQEELT R L M I R H 1 1 1 1 0 0 1 0 0 1 3 0 1 0 2 2 0 0 0 1 0 0 15 0 1653.876 Q9H2U1 Q9H2U1 658 672 DHX36 ATP-dependent RNA helicase DHX36 yes yes 2 2.4889E-07 164.92 By MS/MS 4 0 1 1 458390 458390 0 9094 2482 9405 22607 15919 15919 1513 1 12513 0 LMDVGLIAIR SEHLKNPVIAQKIQKLMDVGLIAIR_____ QKIQKLMDVGLIAIR_______________ K L M I R - 1 1 0 1 0 0 0 1 0 2 2 0 1 0 0 0 0 0 0 1 0 0 10 0 1099.6424 P31948 P31948 534 543 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.00033463 151.44 By MS/MS 6.5 2.06 2 1 1 4 6765500 6765500 0 9095 762 9406;9407 22608;22609;22610;22611 15920;15921;15922;15923 15922 513 4 259970 0 LMEIYQEK AVARYQRQAAEVMGRLMEIYQEKLYRPPPV AAEVMGRLMEIYQEKLYRPPPVLDALGRVI R L M E K L 0 0 0 0 0 1 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 8 0 1052.5212 Q92616 Q92616 1201 1208 GCN1L1 Translational activator GCN1 yes yes 2 0.0034533 146.58 By MS/MS 2.5 0.5 1 1 2 1355500 1355500 0 9096 2068 9408 22612;22613 15924 15924 1 56181 0 LMELFPANK NAVAASLRKVSMDNRLMELFPANKQSVEHF VSMDNRLMELFPANKQSVEHFTKYFTEAGL R L M N K Q 1 0 1 0 0 0 1 0 0 0 2 1 1 1 1 0 0 0 0 0 0 0 9 0 1061.558 Q7L1Q6 Q7L1Q6 215 223 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.014797 95.815 By MS/MS 7 0 1 1 1899200 1899200 0 9097 1762 9409 22614 15925 15925 1244 1 33939 0 LMEPAVEPLTQALK RRTRMLPVSGAFHTRLMEPAVEPLTQALKA RLMEPAVEPLTQALKAVDIKKPLVSVYSNV R L M L K A 2 0 0 0 0 1 2 0 0 0 3 1 1 0 2 0 1 0 0 1 0 0 14 0 1538.8378 Q8IVS2 Q8IVS2 273 286 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 4.4046E-08 182.92 By MS/MS 7.5 0.5 2 2 4 5539400 5539400 0 9098 1858 9410;9411 22615;22616;22617;22618 15926;15927 15926 1279 2 121000 0 LMETQEEDVVLLTAGEHNK VANFIMESQRLELIRLMETQEEDVVLLTAG QEEDVVLLTAGEHNKACSLLGKLRLECADL R L M N K A 1 0 1 1 0 1 4 1 1 0 3 1 1 0 0 0 2 0 0 2 0 0 19 0 2155.0467 Q6PI48 Q6PI48 429 447 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 3 2.941E-05 137.52 By MS/MS 5.75 0.829 2 1 1 4 8223800 8223800 0 9099 1715 9412;9413 22619;22620;22621;22622 15928;15929 15928 1227 2 315870 0 LMGCQDILENVPGR TLSKPAALTGTLEVRLMGCQDILENVPGRS RLMGCQDILENVPGRSKATSVALPGWSPSE R L M G R S 0 1 1 1 1 1 1 2 0 1 2 0 1 0 1 0 0 0 0 1 0 0 14 0 1600.7701 Q16513 Q16513 335 348 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0021321 112.02 By MS/MS 3.5 0.5 1 1 2 827940 827940 0 9100 1535 9414 22623;22624 15930 15930 1169 1 21936 0 LMGDYLLR KVLQARRERQDRISRLMGDYLLRGYRMLGE RQDRISRLMGDYLLRGYRMLGETCADCGTI R L M L R G 0 1 0 1 0 0 0 1 0 0 3 0 1 0 0 0 0 0 1 0 0 0 8 0 979.51609 O60232 O60232 37 44 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 0.017601 109.86 By MS/MS 9 0 1 1 213810 213810 0 9101 238 9415 22625 15931 15931 1 122710 0 LMGEDEKPAAK KGKELNEFREKHNIRLMGEDEKPAAKENSE HNIRLMGEDEKPAAKENSEGAGAKASSAGV R L M A K E 2 0 0 1 0 0 2 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 11 1 1187.5856 Q9UHV9 Q9UHV9 126 136 PFDN2 Prefoldin subunit 2 yes yes 2 0.0033476 144.65 By MS/MS 10 0 1 1 168610 168610 0 9102 2783 9416 22626 15932 15932 1 179220 0 LMGLEALK GRPFLIIKDQDRKSRLMGLEALKSHIMAAK DQDRKSRLMGLEALKSHIMAAKAVANTMRT R L M L K S 1 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 0 0 0 0 8 0 873.49937 P48643 P48643 28 35 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0069891 129.68 By MS/MS By matching 5.75 0.433 1 3 3 1 26651000 26596000 55250 9103 909 9417;9418 22627;22628;22629;22630 15933;15934;15935 15934 648 3 216270 169450 LMKEILDK KKMEESKAKFENLCKLMKEILDKKVEKVTI KFENLCKLMKEILDKKVEKVTISNRLVSSP K L M D K K 0 0 0 1 0 0 1 0 0 1 2 2 1 0 0 0 0 0 0 0 0 0 8 1 988.5627 P08238;Q58FF7;Q58FF6 P08238 566 573 HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 yes no 3 0.0060422 126.24 By MS/MS 4.5 0.5 1 1 2 1643300 1643300 0 9104 501 9419 22631;22632 15936;15937 15936 2 56137 0 LMLAQDEER LLTPLMEKFKILLEKLMLAQDEERQASLAD KILLEKLMLAQDEERQASLADCLNHAVGFA K L M E R Q 1 1 0 1 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 9 0 1103.5281 O43592 O43592 635 643 XPOT Exportin-T yes yes 2 0.018071 93.111 By MS/MS 4 0 1 1 397710 397710 0 9105 208 9420 22633 15938 15938 121 1 10857 0 LMMSELENR YIEKSLLVPDHVITRLMMSELENRRGQHWL DHVITRLMMSELENRRGQHWLLDGFPRTLG R L M N R R 0 1 1 0 0 0 2 0 0 0 2 0 2 0 0 1 0 0 0 0 0 0 9 0 1121.5209 P27144 P27144 72 80 AK4 Adenylate kinase 4, mitochondrial yes yes 2 9.9106E-07 180.87 By MS/MS 8 0 2 2 2350000 2350000 0 9106 702 9421;9422 22634;22635 15939;15940 15939 472;473 2 155030 0 LMQLMESEQKR KLTDTLVSKQQLEQRLMQLMESEQKRVNKE LEQRLMQLMESEQKRVNKEESLQMQVQDIL R L M K R V 0 1 0 0 0 2 2 0 0 0 2 1 2 0 0 1 0 0 0 0 0 0 11 1 1391.6901 Q86UP2 Q86UP2 550 560 KTN1 Kinectin yes yes 2 0.045026 57.96 By MS/MS 6 0 1 1 1271800 1271800 0 9107 1823 9423 22636 15941 15941 0 9917.4 0 LMQQLLESDK LVPAIKEDAGGMIQRLMQQLLESDKYAERK GMIQRLMQQLLESDKYAERKGAAYGLAGLV R L M D K Y 0 0 0 1 0 2 1 0 0 0 3 1 1 0 0 1 0 0 0 0 0 0 10 0 1203.6169 Q92616 Q92616 1381 1390 GCN1L1 Translational activator GCN1 yes yes 2 0.001041 109.42 By MS/MS 2.33 0.471 2 1 3 709700 709700 0 9108 2068 9424;9425 22637;22638;22639 15942;15943 15943 1348 2 30561 0 LMQQLLESDKYAER LVPAIKEDAGGMIQRLMQQLLESDKYAERK RLMQQLLESDKYAERKGAAYGLAGLVKGLG R L M E R K 1 1 0 1 0 2 2 0 0 0 3 1 1 0 0 1 0 0 1 0 0 0 14 1 1722.8611 Q92616 Q92616 1381 1394 GCN1L1 Translational activator GCN1 yes yes 3 0.030674 63.212 By MS/MS 2 0.816 1 1 1 3 1713200 1713200 0 9109 2068 9426 22640;22641;22642 15944 15944 1348 1 70789 0 LMRFDDPLLGPR LMKMNRGIKDLSKVKLMRFDDPLLGPRRVP KVKLMRFDDPLLGPRRVPVLGKEYTEKTPI K L M P R R 0 2 0 2 0 0 0 1 0 0 3 0 1 1 2 0 0 0 0 0 0 0 12 1 1428.7548 Q9P2J5 Q9P2J5 1115 1126 LARS Leucine--tRNA ligase, cytoplasmic yes yes 3 0.0066903 91.313 By MS/MS 3 0 1 1 752650 752650 0 9110 2738 9427 22643 15945 15945 1594 1 19648 0 LMSAISK LAEEPEAVLKGAKPKLMSAISKTFCPAHKS VLKGAKPKLMSAISKTFCPAHKSYIIAGGL K L M S K T 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 0 0 0 0 0 0 7 0 748.41531 P49327 P49327 1872 1878 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0054105 162.31 By MS/MS 2 0 1 1 1612600 1612600 0 9111 915 9428 22644 15946 15946 659 1 80153 0 LMSALLSGLTDR LTTQCPQDLTPYSGKLMSALLSGLTDRNSV SGKLMSALLSGLTDRNSVIQKSCAFAMGHL K L M D R N 1 1 0 1 0 0 0 1 0 0 4 0 1 0 0 2 1 0 0 0 0 0 12 0 1275.6857 Q5VYK3 Q5VYK3 1401 1412 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 5.0669E-05 160.75 By MS/MS 3 0 1 1 1359600 1359600 0 9112 1657 9429 22645 15947 15947 1204 1 35492 0 LMTQAQLEEATR TFKPAIQELKPPTYKLMTQAQLEEATRQAV TYKLMTQAQLEEATRQAVEAAKVRLKMPPV K L M T R Q 2 1 0 0 0 2 2 0 0 0 2 0 1 0 0 0 2 0 0 0 0 0 12 0 1389.6922 P82650 P82650 105 116 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 5.1659E-11 229 By MS/MS By MS/MS 7 0 4 2 2 15393000 15253000 140200 9113 1201 9430;9431 22646;22647;22648;22649 15948;15949;15950;15951 15951 985 4 272580 575570 LMVEFPLDPALSK LGALDNTGGLTSTGRLMVEFPLDPALSKML GRLMVEFPLDPALSKMLIVSCDMGCSSEIL R L M S K M 1 0 0 1 0 0 1 0 0 0 3 1 1 1 2 1 0 0 0 1 0 0 13 0 1458.7792 Q92620 Q92620 945 957 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 2 0.0049875 98.943 By MS/MS 3 0 1 1 134890 134890 0 9114 2069 9432 22650 15952;15953 15952 1357 2 3521.3 0 LMVEPLQAILIR PLMEIGELALDMWRKLMVEPLQAILIRMLL WRKLMVEPLQAILIRMLLREIKNDRGGEDP K L M I R M 1 1 0 0 0 1 1 0 0 2 3 0 1 0 1 0 0 0 0 1 0 0 12 0 1394.8319 Q13617 Q13617 150 161 CUL2 Cullin-2 yes yes 2 0.003986 102.06 By MS/MS 4.5 0.5 1 1 2 113320 113320 0 9115 1388 9433 22651;22652 15954 15954 1071 1 4398.6 0 LNAALATPAK GCQKYFYRSLARHARLNAALATPAKEMGMG ARHARLNAALATPAKEMGMGNVERCRGFSA R L N A K E 4 0 1 0 0 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 10 0 968.56548 Q9NU22 Q9NU22 4206 4215 MDN1 Midasin yes yes 2 0.00087807 140.11 By MS/MS 1 0 1 1 338900 338900 0 9116 2635 9434 22653 15955 15955 1 16558 0 LNAGQIPLDEDDPR SLYKLSCSAYFTFLKLNAGQIPLDEDDPRL KLNAGQIPLDEDDPRLHLSHRVEQSTDDMI K L N P R L 1 1 1 3 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 14 0 1551.7529 Q96Q15 Q96Q15 1757 1770 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 8.0937E-05 150.51 By MS/MS 1.5 0.5 1 1 2 628390 628390 0 9117 2241 9435 22654;22655 15956 15956 1 30875 0 LNAILFK QFGVVMGTVPRLRPRLNAILFKLQFSEQVE TVPRLRPRLNAILFKLQFSEQVENIKPEIV R L N F K L 1 0 1 0 0 0 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 817.50617 O60610 O60610 937 943 DIAPH1 Protein diaphanous homolog 1 yes yes 2 0.019537 127.66 By MS/MS 3 0 1 1 569180 569180 0 9118 255 9436 22656 15957 15957 1 14858 0 LNATASLEQER CPQPPPAPQPQARSRLNATASLEQERSERP ARSRLNATASLEQERSERPRAPGPQAGPGP R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 0.00015972 156.58 By MS/MS 1 0 1 1 156410 156410 0 9119 343 9437 22657 15958 15958 1 7641.9 0 LNDAERELSEISER KIDEKPETFESLVAKLNDAERELSEISERL KLNDAERELSEISERLKASSQVLSESPSQD K L N E R L 1 2 1 1 0 0 4 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 14 1 1659.8064 Q9BWU0 Q9BWU0 506 519 SLC4A1AP Kanadaptin yes yes 3 0.0047941 78.615 By MS/MS 4 0 1 1 993160 993160 0 9120 2398 9438 22658 15959 15959 1 27112 0 LNDFASTVR PEPKIIDAALRACRRLNDFASTVRILEVVK LRACRRLNDFASTVRILEVVKDKAGPHKEI R L N V R I 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 9 0 1021.5193 P20674 P20674 99 107 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 2 1.2298E-05 176.33 By MS/MS 10 0 1 1 565480 565480 0 9121 644 9439 22659 15960 15960 1 601040 0 LNDGSQITYEK GKKVVQLDVRDNMVKLNDGSQITYEKCLIA NMVKLNDGSQITYEKCLIATGGTPRSLSAI K L N E K C 0 0 1 1 0 1 1 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 11 0 1266.6092 O95831 O95831 245 255 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 2.4048E-61 313.3 By MS/MS 4.78 2.2 1 1 1 2 2 1 1 9 15865000 15865000 0 9122 409 9440 22660;22661;22662;22663;22664;22665;22666;22667;22668 15961;15962;15963;15964;15965;15966 15966 6 327900 0 LNDLEDALQQAK AEQRGENALKDAKNKLNDLEDALQQAKEDL KNKLNDLEDALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 2 0 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1356.6885 P04264;CON__P04264 P04264 444 455 KRT1 Keratin, type II cytoskeletal 1 no no 2 4.5158E-19 227.81 By MS/MS By MS/MS 4.88 2.98 1 1 1 1 2 1 1 4 4 1112800 625870 486960 + 9123 450;45 9441 22669;22670;22671;22672;22673;22674;22675;22676 15967;15968;15969;15970 15969 4 301500 614770 LNDLIQR KDAGLKNGVPAVGLKLNDLIQRLQLCYQLT GVPAVGLKLNDLIQRLQLCYQLTTVGKFEE K L N Q R L 0 1 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 870.49232 P53621 P53621 1003 1009 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.017377 133.6 By MS/MS 2 0.816 1 1 1 3 5301000 5301000 0 9124 1005 9442 22677;22678;22679 15971;15972;15973 15972 3 168740 0 LNDSILQATEQR RLSRENRDLKDEIVRLNDSILQATEQRRRA IVRLNDSILQATEQRRRAEENALQQKACGS R L N Q R R 1 1 1 1 0 2 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1386.7103 P15924 P15924 1256 1267 DSP Desmoplakin yes yes 2 3.1279E-11 207.95 By MS/MS By MS/MS 3.33 1.37 2 2 1 1 2 4 491780 289730 202050 9125 603 9443 22680;22681;22682;22683;22684;22685 15974;15975;15976;15977;15978;15979 15978 6 13216 393190 LNDTIQLLVR KQMEDGHTLFDYEVRLNDTIQLLVRQSLVL DYEVRLNDTIQLLVRQSLVLPHSTKERDSE R L N V R Q 0 1 1 1 0 1 0 0 0 1 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1183.6925 Q96T88 Q96T88 65 74 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 2 6.3021E-05 194.94 By MS/MS 4 0 1 1 342840 342840 0 9126 2262 9444 22686 15980 15980 1 9359.1 0 LNDYIFSFDK VAYGCIKYADLSHNRLNDYIFSFDKMLDDR LSHNRLNDYIFSFDKMLDDRGNTAAYLLYA R L N D K M 0 0 1 2 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 0 0 0 10 0 1260.6027 P54136 P54136 513 522 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 7.3293E-16 225.01 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 6519800 6519800 0 9127 1013 9445 22687;22688;22689;22690;22691;22692;22693;22694 15981 15981 1 287550 0 LNEAAAGLNQAATELVQASR SLPPSTGTFQEAQSRLNEAAAGLNQAATEL AGLNQAATELVQASRGTPQDLARASGRFGQ R L N S R G 6 1 2 0 0 2 2 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 20 0 2026.0443 Q9Y490 Q9Y490 1242 1261 TLN1 Talin-1 yes yes 2;3 2.5484E-12 204.9 By MS/MS 2.5 0.5 2 2 4 1560100 1560100 0 9128 2947 9446 22695;22696;22697;22698 15982;15983;15984 15984 3 64141 0 LNECPLDPGGYFIVK SNCVLTGKTPAEFAKLNECPLDPGGYFIVK LNECPLDPGGYFIVKGVEKVILIQEQLSKN K L N V K G 0 0 1 1 1 0 1 2 0 1 2 1 0 1 2 0 0 0 1 1 0 0 15 0 1720.8494 Q9NW08 Q9NW08 158 172 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 4.4361E-07 162.31 By MS/MS 3.5 0.5 1 1 2 1185800 1185800 0 9129 2664 9447 22699;22700 15985;15986 15986 2 31814 0 LNEELKVDEETQEVLENLKDR ASKGHSEKEVADAIRLNEELKVDEETQEVL VDEETQEVLENLKDRWYQADSPPADLLLTE R L N D R W 0 1 2 2 0 1 6 0 0 0 4 2 0 0 0 0 1 0 0 2 0 0 21 2 2542.2762 Q9BRK5 Q9BRK5 183 203 SDF4 45 kDa calcium-binding protein yes yes 3;4 1.2181E-05 127.07 By MS/MS 6.33 0.471 2 1 3 12113000 12113000 0 9130 2324 9448 22701;22702;22703 15987;15988 15988 2 95291 0 LNEIVGNEDTVSR GHYELPWVEKYRPVKLNEIVGNEDTVSRLE VKLNEIVGNEDTVSRLEVFAREGNVPNIII K L N S R L 0 1 2 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1444.7158 P35250 P35250 47 59 RFC2 Replication factor C subunit 2 yes yes 2 8.9582E-12 234.24 By MS/MS By matching 7.33 0.471 2 1 2 1 11016000 10998000 17990 9131 786 9449 22704;22705;22706 15989;15990 15990 2 285630 73853 LNELESDLTFK SDPEGENIHAGLLKKLNELESDLTFKIGPE LLKKLNELESDLTFKIGPEYKSMKSCLYVG K L N F K I 0 0 1 1 0 0 2 0 0 0 3 1 0 1 0 1 1 0 0 0 0 0 11 0 1307.6609 Q6P996 Q6P996 552 562 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 2 1.2864E-16 229.82 By MS/MS 4.5 0.5 1 1 2 2199500 2199500 0 9132 1712 9450 22707;22708 15991;15992 15991 2 74289 0 LNELLVK IAAGLVDDPRAMVGRLNELLVKALERH___ DPRAMVGRLNELLVKALERH__________ R L N V K A 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 7 0 827.51165 Q12931 Q12931 693 699 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.0057584 176.29 By MS/MS 5 0 1 1 8817800 8817800 0 9133 1316 9451 22709 15993 15993 1 362450 0 LNEQEGVPSVFNPPPSRPLQVNTADHR LEQHNWNIEAAVQDRLNEQEGVPSVFNPPP PPPSRPLQVNTADHRIYSYVVSRPQPRGLL R L N H R I 1 2 3 1 0 2 2 1 1 0 2 0 0 1 5 2 1 0 0 3 0 0 27 1 2997.5057 Q96CS3 Q96CS3 51 77 FAF2 FAS-associated factor 2 yes yes 3;4 0.0028404 59.55 By MS/MS 6 0 2 2 44462000 44462000 0 9134 2140 9452 22710;22711 15994;15995 15995 2 346720 0 LNEQQSVLQR AEEEIKQEMNTLQQKLNEQQSVLQRIAAPN TLQQKLNEQQSVLQRIAAPNMKAMEKLESV K L N Q R I 0 1 1 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1213.6415 Q14683 Q14683 1010 1019 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 8.1608E-22 246.93 By MS/MS By matching 3.75 0.829 2 1 1 3 1 6984900 6954100 30849 9135 1440 9453 22712;22713;22714;22715 15996 15996 1 185420 44213 LNEQSPTR DLQQYQSQAKQLFRKLNEQSPTRCTLEAGA AKQLFRKLNEQSPTRCTLEAGAMTFHYIIE K L N T R C 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 8 0 943.47231 O75396 O75396 44 51 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0029465 150.36 By MS/MS 8.5 0.5 1 1 2 900860 900860 0 9136 304 9454 22716;22717 15997;15998 15998 2 427970 0 LNESTFDTQITK IVVDAIDVLKSRFTKLNESTFDTQITKKMG FTKLNESTFDTQITKKMGYYKILDVMYSRL K L N T K K 0 0 1 1 0 1 1 0 0 1 1 1 0 1 0 1 3 0 0 0 0 0 12 0 1395.6882 P78527 P78527 1858 1869 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.8073E-24 248.98 By MS/MS 2 0.816 1 1 1 3 15193000 15193000 0 9137 1197 9455 22718;22719;22720 15999;16000;16001 16000 3 718020 0 LNESTFDTQITKK IVVDAIDVLKSRFTKLNESTFDTQITKKMG TKLNESTFDTQITKKMGYYKILDVMYSRLP K L N K K M 0 0 1 1 0 1 1 0 0 1 1 2 0 1 0 1 3 0 0 0 0 0 13 1 1523.7831 P78527 P78527 1858 1870 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.00010343 190.36 By MS/MS 1.5 0.5 2 2 4 2392800 2392800 0 9138 1197 9456 22721;22722;22723;22724 16002;16003;16004 16003 3 117510 0 LNFELTDALK QSQPATTDSTVTVQKLNFELTDALKTGITA VTVQKLNFELTDALKTGITAAKEKFDATMK K L N L K T 1 0 1 1 0 0 1 0 0 0 3 1 0 1 0 0 1 0 0 0 0 0 10 0 1162.6234 P23786 P23786 415 424 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 2 0.00076505 133.75 By MS/MS 5 0 1 1 353030 353030 0 9139 674 9457 22725 16005 16005 1 14511 0 LNFGDDIPSALR IANLQRAYSLAKEQRLNFGDDIPSALRIAK EQRLNFGDDIPSALRIAKKKRWNSIEERRI R L N L R I 1 1 1 2 0 0 0 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 12 0 1316.6725 Q9UNE7 Q9UNE7 129 140 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 0.0039234 111.5 By MS/MS 8.5 0.5 1 1 2 6305100 6305100 0 9140 2838 9458 22726;22727 16006 16006 1 472520 0 LNFHPDQEDQFFSLVHEK ITLPHLCSVLLAFARLNFHPDQEDQFFSLV HPDQEDQFFSLVHEKLGSELPGLEPALQVD R L N E K L 0 0 1 2 0 2 2 0 2 0 2 1 0 3 1 1 0 0 0 1 0 0 18 0 2229.0491 Q969Z0 Q969Z0 379 396 TBRG4 Protein TBRG4 yes yes 3;4 2.869E-05 135.95 By MS/MS 6 0 2 2 22843000 22843000 0 9141 2112 9459 22728;22729 16007;16008 16008 2 178130 0 LNFSHGTHEYHAETIK ETLKEMIKSGMNVARLNFSHGTHEYHAETI NFSHGTHEYHAETIKNVRTATESFASDPIL R L N I K N 1 0 1 0 0 0 2 1 3 1 1 1 0 1 0 1 2 0 1 0 0 0 16 0 1882.8962 P14618 P14618 74 89 PKM Pyruvate kinase PKM yes yes 2;3;4 1.9956E-06 160.48 By MS/MS 6 0 3 3 51653000 51653000 0 9142 588 9460 22730;22731;22732 16009;16010;16011 16011 3 402790 0 LNGTDPEDVIR GPINFTMFLTMFGEKLNGTDPEDVIRNAFA FGEKLNGTDPEDVIRNAFACFDEEATGTIQ K L N I R N 0 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1227.6095 P19105;O14950;P24844 P19105 93 103 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 2 9.6755E-07 178.54 By MS/MS 9.5 0.5 1 1 2 835850 835850 0 9143 136 9461 22733;22734 16012 16012 1 574440 0 LNHEGKIVLR VVQGQIGAGNYSYLRLNHEGKIVLRMRSLK YSYLRLNHEGKIVLRMRSLKGDADLYVSAS R L N L R M 0 1 1 0 0 0 1 1 1 1 2 1 0 0 0 0 0 0 0 1 0 0 10 1 1177.6931 Q7Z4R8 Q7Z4R8 59 68 C6orf120 UPF0669 protein C6orf120 yes yes 3 0.0016282 112.13 By MS/MS 9 0 1 1 111120 111120 0 9144 1796 9462 22735 16013 16013 1 63774 0 LNHFFEGVEAR LQSYVIYSLGQPLEKLNHFFEGVEARVAQG PLEKLNHFFEGVEARVAQGIREEEVSYQLA K L N A R V 1 1 1 0 0 0 2 1 1 0 1 0 0 2 0 0 0 0 0 1 0 0 11 0 1317.6466 Q9NV70 Q9NV70 778 788 EXOC1 Exocyst complex component 1 yes yes 2;3 0.024331 109.83 By MS/MS 4 0 2 2 2594100 2594100 0 9145 2645 9463 22736;22737 16014;16015 16014 1 70816 0 LNIGDLQVTK DEAVILCKTAIGALKLNIGDLQVTKETIED IGALKLNIGDLQVTKETIEDVEEMLNNLPG K L N T K E 0 0 1 1 0 1 0 1 0 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1099.6237 Q9UNM6 Q9UNM6 123 132 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.017055 94.409 By MS/MS 7.5 0.5 1 1 2 9820400 9820400 0 9146 2845 9464 22738;22739 16016 16016 1 185870 0 LNILDTLSK AVPLALALISVSNPRLNILDTLSKFSHDAD SVSNPRLNILDTLSKFSHDADPEVSYNSIF R L N S K F 0 0 1 1 0 0 0 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 9 0 1015.5914 Q13200 Q13200 704 712 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 2.5306E-11 220.39 By MS/MS By matching 5.67 1.49 2 1 1 1 1 5 1 11970000 11948000 22182 9147 1347 9465 22740;22741;22742;22743;22744;22745 16017;16018 16017 2 324310 46350 LNIPVSQVNPR IISEGNETVEDIAARLNIPVSQVNPRDAKA IAARLNIPVSQVNPRDAKACVVHGSDLKDM R L N P R D 0 1 2 0 0 1 0 0 0 1 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1235.6986 P05023;P13637 P05023 648 658 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 8.7855E-05 163.66 By MS/MS By MS/MS 4 1.87 1 1 1 2 1 1 1 7 1 58121000 57980000 140980 9148 463;575 9466 22746;22747;22748;22749;22750;22751;22752;22753 16019;16020;16021;16022;16023;16024;16025;16026;16027 16025 9 1935200 294590 LNIQPSEADYAVDIR HRLGIEGLSLHNVLKLNIQPSEADYAVDIR LNIQPSEADYAVDIRSPAISWVNNLEVDSR K L N I R S 2 1 1 2 0 1 1 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 15 0 1702.8526 Q9NYU2 Q9NYU2 440 454 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 1.2156E-14 208.82 By MS/MS 4 0.816 1 1 1 3 3741800 3741800 0 9149 2699 9467 22754;22755;22756 16028 16028 1 100990 0 LNISFPATGCQK ______________________________ ______________________________ K L N Q K L 1 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 12 0 1334.6653 P62753 P62753 3 14 RPS6 40S ribosomal protein S6 yes yes 2 0.002709 117.52 By MS/MS 8 0 1 1 1910300 1910300 0 9150 1143 9468 22757 16029 16029 1 126020 0 LNIWDVGGQK TLGFNIKTLEHRGFKLNIWDVGGQKSLRSY HRGFKLNIWDVGGQKSLRSYWRNYFESTDG K L N Q K S 0 0 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1128.5928 P36404 P36404 62 71 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 0.00093849 125.71 By MS/MS 8.5 1.12 1 1 1 1 4 801060 801060 0 9151 802 9469 22758;22759;22760;22761 16030 16030 1 345000 0 LNIWGEAR LSKRPMPLSARGNSRLNIWGEARVGSELCA SARGNSRLNIWGEARVGSELCAGWEEQFEV R L N A R V 1 1 1 0 0 0 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 8 0 957.50321 Q12789 Q12789 1175 1182 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.019278 107.69 By MS/MS 2 0 1 1 180660 180660 0 9152 1306 9470 22762 16031 16031 1 8979.7 0 LNKLEDTITLIK VDQSEILYQAMDIIRLNKLEDTITLIKGKI IIRLNKLEDTITLIKGKIEEVHLPVEKVDV R L N I K G 0 0 1 1 0 0 1 0 0 2 3 2 0 0 0 0 2 0 0 0 0 0 12 1 1399.8286 O60678 O60678 299 310 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 1.6522E-06 188.96 By MS/MS 6 0.816 1 1 1 3 3486700 3486700 0 9153 257 9471 22763;22764;22765 16032;16033 16033 2 50772 0 LNLAQFLNEDLS RLPRRAKTAALEKSKLNLAQFLNEDLS___ KSKLNLAQFLNEDLS_______________ K L N L S - 1 0 2 1 0 1 1 0 0 0 4 0 0 1 0 1 0 0 0 0 0 0 12 0 1375.6983 Q9BPX3 Q9BPX3 1004 1015 NCAPG Condensin complex subunit 3 yes yes 2 0.00226 119.75 By MS/MS 4 0 1 1 93811 93811 0 9154 2302 9472 22766 16034 16034 1 2560.9 0 LNLATECLPLDK DKSMQPGTSLAKAKRLNLATECLPLDKYLQ AKRLNLATECLPLDKYLQWEIGNKNLTLDQ R L N D K Y 1 0 1 1 1 0 1 0 0 0 4 1 0 0 1 0 1 0 0 0 0 0 12 0 1385.7225 Q7L0Y3 Q7L0Y3 329 340 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 1.8679E-16 218.55 By MS/MS 7 0 1 1 10754000 10754000 0 9155 1761 9473 22767 16035 16035 1 192180 0 LNLEHIATSSAVSK YVDKVLETTVEIFNKLNLEHIATSSAVSKE KLNLEHIATSSAVSKELTRLLKIPVDTYNN K L N S K E 2 0 1 0 0 0 1 0 1 1 2 1 0 0 0 3 1 0 0 1 0 0 14 0 1468.7886 Q96QK1 Q96QK1 383 396 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.023071 72.615 By MS/MS 5 0 1 1 714740 714740 0 9156 2242 9474 22768 16036 16036 1 29379 0 LNLENKDYK IHKNADGKIISLDAKLNLENKDYKKTTKVT ISLDAKLNLENKDYKKTTKVTWLAETTHAL K L N Y K K 0 0 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 9 1 1135.5873 P07814 P07814 594 602 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.034731 116.37 By MS/MS 3.5 0.5 1 1 2 1064200 1064200 0 9157 493 9475 22769;22770 16037 16037 1 27936 0 LNLENKDYKK IHKNADGKIISLDAKLNLENKDYKKTTKVT SLDAKLNLENKDYKKTTKVTWLAETTHALP K L N K K T 0 0 2 1 0 0 1 0 0 0 2 3 0 0 0 0 0 0 1 0 0 0 10 2 1263.6823 P07814 P07814 594 603 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.0022322 154.01 By MS/MS 3.33 0.471 2 1 3 4582500 4582500 0 9158 493 9476 22771;22772;22773 16038;16039 16039 2 120200 0 LNLIAELESR AFGLGTWQVQRRKWKLNLIAELESRVLAEP RRKWKLNLIAELESRVLAEPVPLPADPMEL K L N S R V 1 1 1 0 0 0 2 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1156.6452 Q15526 Q15526 88 97 SURF1 Surfeit locus protein 1 yes yes 2 0.00013647 161.51 By MS/MS 8 0 1 1 1076900 1076900 0 9159 1507 9477 22774 16040 16040 1 71040 0 LNLNNTVLSK EALGIRKPYIWEYSRLNLNNTVLSKRKLTW WEYSRLNLNNTVLSKRKLTWFVNEGLVDGW R L N S K R 0 0 3 0 0 0 0 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 10 0 1114.6346 P07814 P07814 426 435 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00050511 144.77 By MS/MS 5 0.816 1 1 1 3 6864300 6864300 0 9160 493 9478 22775;22776;22777 16041;16042 16041 2 153430 0 LNLPINIIGLAPLCENMPSGK GGAATICSAIVSAAKLNLPINIIGLAPLCE IIGLAPLCENMPSGKANKPGDVVRAKNGKT K L N G K A 1 0 3 0 1 0 1 2 0 3 4 1 1 0 3 1 0 0 0 0 0 0 21 0 2263.2068 P28838 P28838 322 342 LAP3 Cytosol aminopeptidase yes yes 2;3 0.00023506 108.58 By MS/MS 6 0 2 2 772530 772530 0 9161 722 9479 22778;22779 16043;16044 16043 496 2 6024.2 0 LNLVDLAGSENIGR KETTIDGEELVKIGKLNLVDLAGSENIGRS KLNLVDLAGSENIGRSGAVDKRAREAGNIN K L N G R S 1 1 2 1 0 0 1 2 0 1 3 0 0 0 0 1 0 0 0 1 0 0 14 0 1469.7838 P52732 P52732 261 274 KIF11 Kinesin-like protein KIF11 yes yes 2 1.9354E-08 191.79 By MS/MS 3.5 0.5 1 1 2 1112600 1112600 0 9162 990 9480 22780;22781 16045;16046 16045 2 29853 0 LNLYAASLR DEMCRHLFQLLSIERLNLYAASLRVCFLLF LLSIERLNLYAASLRVCFLLFESMREHLKF R L N L R V 2 1 1 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 9 0 1019.5764 Q92538 Q92538 470 478 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.035796 87.806 By MS/MS 2 0 1 1 360760 360760 0 9163 2055 9481 22782 16047 16047 1 17932 0 LNLYELK LATDVQTVAQRLKFRLNLYELKEGRQIKPY VAQRLKFRLNLYELKEGRQIKPYTLMSMVA R L N L K E 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 7 0 891.50657 P49720 P49720 71 77 PSMB3 Proteasome subunit beta type-3 yes yes 2 0.032233 113.41 By MS/MS 9.5 0.5 1 1 2 2183000 2183000 0 9164 926 9482 22783;22784 16048 16048 1 1278500 0 LNNCGMGIGGGK ALLKSSACFTLQELKLNNCGMGIGGGKILA ELKLNNCGMGIGGGKILAAALTECHRKSSA K L N G K I 0 0 2 0 1 0 0 5 0 1 1 1 1 0 0 0 0 0 0 0 0 0 12 0 1176.538 P46060 P46060 149 160 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0026902 111.46 By MS/MS 5 0 1 1 754860 754860 0 9165 876 9483 22785 16049 16049 625 1 31028 0 LNNELLAK FILPDLGKLQQLEDKLNNELLAKFLEKKYA LQQLEDKLNNELLAKFLEKKYASSANLHLP K L N A K F 1 0 2 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 913.52328 CON__P34955 CON__P34955 289 296 yes yes 2 0.031446 98.629 By MS/MS 10 0 1 1 150590 150590 0 + 9166 51 9484 22786 16050 16050 1 160060 0 LNNLVLFDK KAKKKKWSKGKVRDKLNNLVLFDKATYDKL GKVRDKLNNLVLFDKATYDKLCKEVPNYKL K L N D K A 0 0 2 1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 9 0 1074.6073 P62851 P62851 44 52 RPS25 40S ribosomal protein S25 yes yes 2 6.9832E-08 196.99 By MS/MS By matching 9.67 0.471 1 2 2 1 5199700 5165100 34568 9167 1150 9485 22787;22788;22789 16051;16052 16052 2 4765500 886640 LNNPGSTVFTEDCNILLK LWAIEMWDPAAQAFRLNNPGSTVFTEDCNI PGSTVFTEDCNILLKLVMAGETTNSRGQRL R L N L K L 0 0 3 1 1 0 1 1 0 1 3 1 0 1 1 1 2 0 0 1 0 0 18 0 2034.0092 P26358 P26358 1179 1196 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0013141 157.33 By MS/MS 3 0.816 1 1 1 3 434150 434150 0 9168 693 9486 22790;22791;22792 16053;16054;16055 16055 3 15359 0 LNPADAPNPVVFVATK SGIRSSSQPAAKRQKLNPADAPNPVVFVAT NPADAPNPVVFVATKDTRALRKALTHLEMR K L N T K D 3 0 2 1 0 0 0 0 0 0 1 1 0 1 3 0 1 0 0 3 0 0 16 0 1651.8934 O94776 O94776 596 611 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.00036843 126.71 By MS/MS 5 0 1 1 1874000 1874000 0 9169 349 9487 22793 16056 16056 1 77029 0 LNPINTTLLK DNSPAVEAVVECNSRLNPINTTLLKMADCG ECNSRLNPINTTLLKMADCGGLPQVVQPGK R L N L K M 0 0 2 0 0 0 0 0 0 1 3 1 0 0 1 0 2 0 0 0 0 0 10 0 1125.6758 Q9UGV2 Q9UGV2 277 286 NDRG3 Protein NDRG3 yes yes 2 0.0035692 115.71 By MS/MS 7.5 0.5 1 1 2 4013200 4013200 0 9170 2776 9488 22794;22795 16057 16057 1 92579 0 LNPQEYLTSTACR EIYLAYRNFMIDTYRLNPQEYLTSTACRRN YRLNPQEYLTSTACRRNLTGDVCAVMRVHA R L N C R R 1 1 1 0 1 1 1 0 0 0 2 0 0 0 1 1 2 0 1 0 0 0 13 0 1551.7351 Q8TAQ2;Q92922 Q92922 500 512 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 2 0.01346 90.697 By MS/MS 3.5 0.5 1 1 2 1481800 1481800 0 9171 2090;1983 9489 22796;22797 16058 16058 1 39014 0 LNQDQLDAVSK GKLDDYQERMNKGERLNQDQLDAVSKYQEV KGERLNQDQLDAVSKYQEVTNNLEFAKELQ R L N S K Y 1 0 1 2 0 2 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1229.6252 Q14444 Q14444 88 98 CAPRIN1 Caprin-1 yes yes 2 0.00013222 166.69 By MS/MS 4 0 1 1 0 0 0 9172 1432 9490 22798 16059 16059 1 0 0 LNQPGTPTR VEEVDFAGWLCKTLRLNQPGTPTRTAV___ LCKTLRLNQPGTPTRTAV____________ R L N T R T 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 P36507 P36507 389 397 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 2 0.018406 97.635 By MS/MS 7 0 1 1 526790 526790 0 9173 804 9491 22799 16060 16060 1 9413.8 0 LNQPPEDGISSVK ______________________________ FKLNQPPEDGISSVKFSPNTSQFLLVSSWD K L N V K F 0 0 1 1 0 1 1 1 0 1 1 1 0 0 2 2 0 0 0 1 0 0 13 0 1382.7042 O43684 O43684 9 21 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.00092365 117.86 By MS/MS 8 0.816 1 1 1 3 3160200 3160200 0 9174 216 9492 22800;22801;22802 16061;16062 16061 2 181380 0 LNQSSPDNVTDTK FLHSQEMSILNSNIKLNQSSPDNVTDTKGA IKLNQSSPDNVTDTKGALSPITDNTEVDTG K L N T K G 0 0 2 2 0 1 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 13 0 1417.6685 Q08AD1 Q08AD1 595 607 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.00034313 140.63 By MS/MS 2 0 1 1 265910 265910 0 9175 1292 9493 22803 16063 16063 1 13217 0 LNQTTFTATR AVPTLGLKTDAIPGRLNQTTFTATRPGVYY AIPGRLNQTTFTATRPGVYYGQCSEICGAN R L N T R P 1 1 1 0 0 1 0 0 0 0 1 0 0 1 0 0 4 0 0 0 0 0 10 0 1151.5935 P00403 P00403 179 188 MT-CO2 Cytochrome c oxidase subunit 2 yes yes 2 3.2849E-05 173.24 By MS/MS 9.5 0.5 1 1 2 2649100 2649100 0 9176 428 9494 22804;22805 16064 16064 1 1555900 0 LNQVCATHQHFESR CLRPGTVTDETFLEKLNQVCATHQHFESRM KLNQVCATHQHFESRMSKCSRFLNDTSLPH K L N S R M 1 1 1 0 1 2 1 0 2 0 1 0 0 1 0 1 1 0 0 1 0 0 14 0 1725.8005 O43795 O43795 479 492 MYO1B Unconventional myosin-Ib yes yes 3 0.049594 60.364 By MS/MS 4 0 1 1 463960 463960 0 9177 223 9495 22806 16065 16065 1 12665 0 LNQVCFDDDGTSSPQDR QSEVADKTEDYLWLKLNQVCFDDDGTSSPQ QVCFDDDGTSSPQDRLTLSQFQKQLLEDYG K L N D R L 0 1 1 4 1 2 0 1 0 0 1 0 0 1 1 2 1 0 0 1 0 0 17 0 1952.817 Q8N1F7 Q8N1F7 418 434 NUP93 Nuclear pore complex protein Nup93 yes yes 2 1.5532E-13 177.93 By MS/MS 5 0 1 1 1235400 1235400 0 9178 1898 9496 22807 16066 16066 1 50779 0 LNQWCNVVR AYAKWVQSHRDLPIKLNQWCNVVRWEFKHP RDLPIKLNQWCNVVRWEFKHPQPFLRTREF K L N V R W 0 1 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 9 0 1187.587 P07814 P07814 1144 1152 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 8.111E-05 178.08 By MS/MS 3.5 0.5 1 1 2 7376500 7376500 0 9179 493 9497 22808;22809 16067;16068 16068 2 192560 0 LNRIENALK ANNSLSFEKAYCEYRLNRIENALKTIESAN AYCEYRLNRIENALKTIESANQQTDKLKEL R L N L K T 1 1 2 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 1 1069.6244 O76094 O76094 91 99 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.0011551 128.6 By MS/MS 5 0 1 1 1303600 1303600 0 9180 346 9498 22810 16069 16069 1 53582 0 LNRLPAAGVGDMVMATVK AKNLYIISVKGIKGRLNRLPAAGVGDMVMA LPAAGVGDMVMATVKKGKPELRKKVHPAVV R L N V K K 3 1 1 1 0 0 0 2 0 0 2 1 2 0 1 0 1 0 0 3 0 0 18 1 1841.9856 P62829 P62829 49 66 RPL23 60S ribosomal protein L23 yes yes 3 0.00077877 106.31 By MS/MS 10 0 1 1 312250 312250 0 9181 1147 9499 22811 16070 16070 896;897 1 331890 0 LNSELDLDDAILEK IKIEGQSKLHRGEIKLNSELDLDDAILEKF KLNSELDLDDAILEKFAFSNALCLSVKLAI K L N E K F 1 0 1 3 0 0 2 0 0 1 4 1 0 0 0 1 0 0 0 0 0 0 14 0 1586.8039 Q9NWS8 Q9NWS8 289 302 RMND1 Required for meiotic nuclear division protein 1 homolog yes yes 2 1.3976E-36 270.45 By MS/MS 8 0 1 1 661450 661450 0 9182 2668 9500 22812 16071 16071 1 43636 0 LNSLAIGLR LAAPLLKRLSLSTSKLNSLAIGLRQIAASS SLSTSKLNSLAIGLRQIAASSQDSVGRVLR K L N L R Q 1 1 1 0 0 0 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 9 0 955.58147 P54886 P54886 433 441 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 7.1707E-24 268 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 22798000 22798000 0 9183 1019 9501 22813;22814;22815;22816;22817;22818;22819;22820 16072;16073 16072 2 723540 0 LNSNEAR AYPALVVEKMLKALKLNSNEARLKFPRLLQ EKMLKALKLNSNEARLKFPRLLQIIERYPE K L N A R L 1 1 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 802.39333 P78527 P78527 3456 3462 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0070477 167.9 By MS/MS 1.5 0.5 1 1 2 1570300 1570300 0 9184 1197 9502 22821;22822 16074;16075 16075 2 77152 0 LNSNSGAGR DRLELGKPDNNDGSKLNSNSGAGRTSRPGR NNDGSKLNSNSGAGRTSRPGRTSDSPWFLS K L N G R T 1 1 2 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 874.42569 O95071 O95071 92 100 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0026132 123.21 By MS/MS 1.5 0.5 1 1 2 353020 353020 0 9185 364 9503 22823;22824 16076;16077 16077 2 17335 0 LNSNTQVVLLSATMPSDVLEVTK LSRGFKDQIYDIFQKLNSNTQVVLLSATMP LLSATMPSDVLEVTKKFMRDPIRILVKKEE K L N T K K 1 0 2 1 0 1 1 0 0 0 4 1 1 0 1 3 3 0 0 4 0 0 23 0 2458.2989 P60842 P60842 203 225 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 1.1484E-21 178.85 By MS/MS 3.75 2.28 2 2 4 8 284230000 284230000 0 9186 1074 9504;9505 22825;22826;22827;22828;22829;22830;22831;22832 16078;16079;16080;16081;16082;16083;16084 16083 845 7 2286700 0 LNSNTQVVLLSATMPSDVLEVTKK LSRGFKDQIYDIFQKLNSNTQVVLLSATMP LSATMPSDVLEVTKKFMRDPIRILVKKEEL K L N K K F 1 0 2 1 0 1 1 0 0 0 4 2 1 0 1 3 3 0 0 4 0 0 24 1 2586.3939 P60842 P60842 203 226 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3;4 3.574E-15 228.49 By MS/MS 6 0 6 6 298270000 298270000 0 9187 1074 9506;9507 22833;22834;22835;22836;22837;22838 16085;16086;16087;16088;16089;16090 16088 845 6 2325900 0 LNSSVQLAGLR KVYMNQVCDDTITSRLNSSVQLAGLRLLTN ITSRLNSSVQLAGLRLLTNMTVTNEYQHML R L N L R L 1 1 1 0 0 1 0 1 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1156.6564 Q9UH62 Q9UH62 216 226 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 2 4.7897E-07 187.16 By MS/MS 7.5 0.5 1 1 2 2252600 2252600 0 9188 2777 9508 22839;22840 16091 16091 1 58826 0 LNSVLEVEK LLDEISLADDSVLERLNSVLEVEKSLVLAE DSVLERLNSVLEVEKSLVLAEKGSPEDKDS R L N E K S 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 1029.5706 Q9NU22 Q9NU22 1481 1489 MDN1 Midasin yes yes 2 0.0023314 126.24 By MS/MS 2 0.816 1 1 1 3 970660 970660 0 9189 2635 9509 22841;22842;22843 16092 16092 1 42165 0 LNSVQSSER LRSLLVNPEGPTLMRLNSVQSSERPLFLVH GPTLMRLNSVQSSERPLFLVHPIEGSTTVF R L N E R P 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 9 0 1018.5043 P49327 P49327 2234 2242 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00034533 156.83 By MS/MS 1.8 0.748 2 2 1 5 912850 912850 0 9190 915 9510 22844;22845;22846;22847;22848 16093;16094 16094 2 44350 0 LNTEWSELENLVLK GFVGHPVNAFKLMKRLNTEWSELENLVLKD RLNTEWSELENLVLKDMSDGFISNLTIQRQ R L N L K D 0 0 2 0 0 0 3 0 0 0 4 1 0 0 0 1 1 1 0 1 0 0 14 0 1686.8829 P13674 P13674 91 104 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 2 2.1215E-104 359.9 By MS/MS 6 0 1 1 579720 579720 0 9191 578 9511 22849 16095 16095 1 4520.7 0 LNVCVSK RAITHLNNNFMFGQKLNVCVSKQPAIMPGQ NNFMFGQKLNVCVSKQPAIMPGQSYGLEDG K L N S K Q 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 7 0 818.43202 P14866;Q8WVV9 P14866 449 455 HNRNPL;HNRNPLL Heterogeneous nuclear ribonucleoprotein L;Heterogeneous nuclear ribonucleoprotein L-like no no 2 0.016589 135.77 By MS/MS 6 0 1 1 1933600 1933600 0 9192 593;2035 9512 22850 16096 16096 1 15078 0 LNVEEGLYSR WKRQNITNQLEKWMKLNVEEGLYSRTLAGS EKWMKLNVEEGLYSRTLAGSITTPPLLIVF K L N S R T 0 1 1 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 10 0 1178.5932 Q68CQ7 Q68CQ7 268 277 GLT8D1 Glycosyltransferase 8 domain-containing protein 1 yes yes 2 0.0065079 102.52 By MS/MS By matching 6 0.816 1 1 1 1 2 2696500 2657000 39568 9193 1671 9513 22851;22852;22853 16097 16097 1 47481 119790 LNVLANVIR NGVDYVIMGMPHRGRLNVLANVIRKELEQI MPHRGRLNVLANVIRKELEQIFCQFDSKLE R L N I R K 1 1 2 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 9 0 1010.6237 Q02218;Q9ULD0 Q02218 315 323 OGDH;OGDHL 2-oxoglutarate dehydrogenase, mitochondrial;2-oxoglutarate dehydrogenase-like, mitochondrial yes no 2 0.00027548 159.2 By MS/MS 4 0 1 1 316400 316400 0 9194 1251 9514 22854 16098 16098 1 8637.5 0 LNVTPLAR GAAALVLMTADAAKRLNVTPLARIVAFADA TADAAKRLNVTPLARIVAFADAAVEPIDFP R L N A R I 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 8 0 882.5287 P24752 P24752 304 311 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.010733 118.74 By MS/MS By matching 7.33 0.471 2 1 2 1 55598000 55399000 199410 9195 680 9515 22855;22856;22857 16099 16099 1 1030800 818630 LNVWDLSK PHNETILASSGTDRRLNVWDLSKIGEEQSP SSGTDRRLNVWDLSKIGEEQSPEDAEDGPP R L N S K I 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 0 8 0 973.52328 Q09028;Q16576 Q09028 342 349 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 0.017898 109.48 By MS/MS 7 0.816 1 1 1 3 7326600 7326600 0 9196 1296;1541 9516 22858;22859;22860 16100 16100 1 70374 0 LPAAGVGDMVMATVK LYIISVKGIKGRLNRLPAAGVGDMVMATVK LPAAGVGDMVMATVKKGKPELRKKVHPAVV R L P V K K 3 0 0 1 0 0 0 2 0 0 1 1 2 0 1 0 1 0 0 3 0 0 15 0 1458.7575 P62829 P62829 52 66 RPL23 60S ribosomal protein L23 yes yes 2 8.1305E-05 128.88 By MS/MS By matching 10 0 2 1 1 5380200 5197100 183070 9197 1147 9517 22861;22862 16101 16101 896;897 1 5524000 4695600 LPADTCLLEFAR TFEDCQLALAEGQLRLPADTCLLEFARLVR QLRLPADTCLLEFARLVRGLGLKPEKLEKD R L P A R L 2 1 0 1 1 0 1 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 12 0 1404.7071 Q8NF37 Q8NF37 325 336 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.00014765 155.11 By MS/MS 7 1.41 1 1 1 1 1 5 14962000 14962000 0 9198 1967 9518 22863;22864;22865;22866;22867 16102 16102 1 164100 0 LPCAVLR GLAVFALLDVWYLVRLPCAVLRARLLQPRV LDVWYLVRLPCAVLRARLLQPRVRDLLAEQ R L P L R A 1 1 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 7 0 827.46874 Q8WUY1 Q8WUY1 27 33 THEM6 Protein THEM6 yes yes 2 0.022046 120.76 By MS/MS 9 0 1 1 507400 507400 0 9199 2020 9519 22868 16103 16103 1 291200 0 LPCIFICENNR QGQIFEAYNMAALWKLPCIFICENNRYGMG ALWKLPCIFICENNRYGMGTSVERAAASTD K L P N R Y 0 1 2 0 2 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 11 0 1434.6748 P08559 P08559 216 226 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.023891 92.239 By MS/MS 8 0.816 1 1 1 3 12459000 12459000 0 9200 504 9520 22869;22870;22871 16104 16104 1 299580 0 LPCIYLVDSGGAYLPR VKKQLRAQEIAMQNRLPCIYLVDSGGAYLP PCIYLVDSGGAYLPRQADVFPDRDHFGRTF R L P P R Q 1 1 0 1 1 0 0 2 0 1 3 0 0 0 2 1 0 0 2 1 0 0 16 0 1792.9182 Q9HCC0 Q9HCC0 165 180 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.00030535 158.42 By MS/MS 6 0 1 1 4231700 4231700 0 9201 2559 9521 22872 16105 16105 1 32999 0 LPCVAAK YWELIYEDSMDLIAKLPCVAAKIYRNLYRE DSMDLIAKLPCVAAKIYRNLYREGSGIGAI K L P A K I 2 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 7 0 757.41565 O75390 O75390 209 215 CS Citrate synthase, mitochondrial yes yes 2 0.044485 104.94 By MS/MS 7 0 1 1 738780 738780 0 9202 302 9522 22873 16106 16106 1 13202 0 LPDGFTQLR KALEIADFSGNPLSRLPDGFTQLRSLAHLA GNPLSRLPDGFTQLRSLAHLALNDVSLQAL R L P L R S 0 1 0 1 0 1 0 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 9 0 1045.5556 Q14160 Q14160 120 128 SCRIB Protein scribble homolog yes yes 2 0.010711 104.2 By MS/MS 2.5 0.5 1 1 2 812510 812510 0 9203 1412 9523 22874;22875 16107 16107 1 33717 0 LPDINIYQLK VLAMCQAIISSNSERLPDINIYQLKVLDCA SNSERLPDINIYQLKVLDCAMDACINLGLL R L P L K V 0 0 1 1 0 1 0 0 0 2 2 1 0 0 1 0 0 0 1 0 0 0 10 0 1215.6863 Q9H7B4 Q9H7B4 320 329 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes yes 2 0.00040491 148.69 By MS/MS 7 0 1 1 1195800 1195800 0 9204 2514 9524 22876 16108 16108 1 21369 0 LPDLKDAEAVQK RKKQKLAKERAGLSKLPDLKDAEAVQKFFL LSKLPDLKDAEAVQKFFLEEIQLGEELLAQ K L P Q K F 2 0 0 2 0 1 1 0 0 0 2 2 0 0 1 0 0 0 0 1 0 0 12 1 1325.7191 Q15388 Q15388 57 68 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 0.0005323 161.19 By MS/MS 10 0 1 1 1669700 1669700 0 9205 1495 9525 22877 16109 16109 1 1774700 0 LPDLSPVENK QRQKQPRAGPIKAQKLPDLSPVENKEHKPG IKAQKLPDLSPVENKEHKPGPIGKERSLKN K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 Q9Y520 Q9Y520 2101 2110 PRRC2C Protein PRRC2C yes yes 2 0.010439 99.013 By MS/MS 1.5 0.5 1 1 2 277800 277800 0 9206 2963 9526 22878;22879 16110 16110 1 13619 0 LPDVYGVFQFK TFLKKKGGKYSVQFKLPDVYGVFQFKVDYN VQFKLPDVYGVFQFKVDYNRLGYTHLYSST K L P F K V 0 0 0 1 0 1 0 1 0 0 1 1 0 2 1 0 0 0 1 2 0 0 11 0 1311.6863 P39656 P39656 381 391 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.00012535 157.99 By MS/MS 6 0 1 1 8347100 8347100 0 9207 825 9527 22880 16111 16111 1 65091 0 LPEAAFLAR GKVDACLELLIRTGRLPEAAFLARTYLPSQ LIRTGRLPEAAFLARTYLPSQVSRVVKLWR R L P A R T 3 1 0 0 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 9 0 986.55492 P35606 P35606 751 759 COPB2 Coatomer subunit beta yes yes 2 0.00060318 151.04 By MS/MS 2.5 1.12 1 1 1 1 4 3660100 3660100 0 9208 795 9528 22881;22882;22883;22884 16112;16113;16114;16115 16112 4 156970 0 LPEASQSPLVLK LPINSAAIKAECTARLPEASQSPLVLKQAV TARLPEASQSPLVLKQAVRKPLEAVLRYLE R L P L K Q 1 0 0 0 0 1 1 0 0 0 3 1 0 0 2 2 0 0 0 1 0 0 12 0 1280.734 Q13330 Q13330 516 527 MTA1 Metastasis-associated protein MTA1 yes yes 2 8.4511E-05 158.47 By MS/MS By matching 5.33 0.471 2 1 2 1 2269600 2251400 18192 9209 1357 9529 22885;22886;22887 16116 16116 1 74552 53830 LPECGSGDGSLQPPR ESVSEVVVNRVDVARLPECGSGDGSLQPPR LPECGSGDGSLQPPRKVQMGAKDATPVPCG R L P P R K 0 1 0 1 1 1 1 3 0 0 2 0 0 0 3 2 0 0 0 0 0 0 15 0 1568.7253 O00411 O00411 91 105 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0052662 103.46 By MS/MS 3.5 0.5 1 1 2 1450700 1450700 0 9210 92 9530 22888;22889 16117;16118 16117 2 37999 0 LPEDPLLSGLLDSPALK LQLELAQVLAQERPKLPEDPLLSGLLDSPA EDPLLSGLLDSPALKACLDTAVENMPSLKM K L P L K A 1 0 0 2 0 0 1 1 0 0 6 1 0 0 3 2 0 0 0 0 0 0 17 0 1776.9873 P49327 P49327 1209 1225 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.1175E-14 217.46 By MS/MS 3.75 1.48 1 1 1 1 4 1965700 1965700 0 9211 915 9531 22890;22891;22892;22893 16119;16120;16121;16122;16123;16124 16124 6 60644 0 LPEEPITR FFKNLGVVVAPHTLKLPEEPITRWGEYWCE VAPHTLKLPEEPITRWGEYWCEVTVNGLDT K L P T R W 0 1 0 0 0 0 2 0 0 1 1 0 0 0 2 0 1 0 0 0 0 0 8 0 953.5182 Q9BYD2 Q9BYD2 208 215 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.01615 111.74 By MS/MS By matching 8.33 0.471 2 1 2 1 11070000 11019000 51170 9212 2413 9532 22894;22895;22896 16125 16125 1 808220 436540 LPEEVATPTTDEEK VLIRKLLALMAQEQKLPEEVATPTTDEEKD KLPEEVATPTTDEEKDSLIAIDRSFLSTLP K L P E K D 1 0 0 1 0 0 4 0 0 0 1 1 0 0 2 0 3 0 0 1 0 0 14 0 1557.741 O95602 O95602 351 364 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.026226 79.23 By MS/MS 2 0 1 1 53245 53245 0 9213 401 9533 22897 16126 16126 1 2646.6 0 LPEEVATPTTDEEKDSLIAIDR VLIRKLLALMAQEQKLPEEVATPTTDEEKD PTTDEEKDSLIAIDRSFLSTLPGQSLIDKL K L P D R S 2 1 0 3 0 0 4 0 0 2 2 1 0 0 2 1 3 0 0 1 0 0 22 1 2441.2173 O95602 O95602 351 372 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 3 0.0036936 69.03 By MS/MS 2 0 1 1 195810 195810 0 9214 401 9534 22898 16127 16127 1 9732.8 0 LPEFYDETLLR LERLPTASTCMNLLKLPEFYDETLLRSKLL NLLKLPEFYDETLLRSKLLYAIECAAGFEL K L P L R S 0 1 0 1 0 0 2 0 0 0 3 0 0 1 1 0 1 0 1 0 0 0 11 0 1394.7082 Q15386 Q15386 1057 1067 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.00051625 137.98 By MS/MS 3.5 0.5 1 1 2 1956400 1956400 0 9215 1494 9535 22899;22900 16128 16128 1 53332 0 LPEGDLGKEIEQK LSLLQDSGEVREDLRLPEGDLGKEIEQKYD LRLPEGDLGKEIEQKYDCGEEILITVLSAM R L P Q K Y 0 0 0 1 0 1 3 2 0 1 2 2 0 0 1 0 0 0 0 0 0 0 13 1 1454.7617 P63241;Q6IS14 P63241 114 126 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 3 0.0069973 114.56 By MS/MS 10 0 1 1 2129200 2129200 0 9216 1177 9536 22901 16129 16129 1 2263200 0 LPEGVVPK KMAHRAGLLPNHRPRLPEGVVPKSKPQLNR LPNHRPRLPEGVVPKSKPQLNRYLTRWAPG R L P P K S 0 0 0 0 0 0 1 1 0 0 1 1 0 0 2 0 0 0 0 2 0 0 8 0 837.496 Q9NVS2 Q9NVS2 135 142 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 0.030511 98.997 By MS/MS 9 0 1 1 1870700 1870700 0 9217 2660 9537 22902 16130 16130 1 1073600 0 LPENYTDETWQK SAKKLVIKNFKDKPKLPENYTDETWQKLKE KPKLPENYTDETWQKLKEAVEAIQNSTSIK K L P Q K L 0 0 1 1 0 1 2 0 0 0 1 1 0 0 1 0 2 1 1 0 0 0 12 0 1522.694 Q13620 Q13620 208 219 CUL4B Cullin-4B yes yes 2 0.0002547 150.09 By MS/MS 5 0.816 1 1 1 3 1423300 1423300 0 9218 1390 9538 22903;22904;22905 16131 16131 1 33102 0 LPESNQTLLR LPYAATVLRCLDGCRLPESNQTLLRKLGVK LDGCRLPESNQTLLRKLGVKLVQRLGLTFL R L P L R K 0 1 1 0 0 1 1 0 0 0 3 0 0 0 1 1 1 0 0 0 0 0 10 0 1169.6404 Q9BTW9 Q9BTW9 285 294 TBCD Tubulin-specific chaperone D yes yes 2 0.0093256 99.788 By MS/MS 4.5 0.5 1 1 2 1149500 1149500 0 9219 2354 9539 22906;22907 16132 16132 1 35244 0 LPETNLFETEETR RINMVEELEKALGMKLPETNLFETEETRKI MKLPETNLFETEETRKILDDICVAKAVECP K L P T R K 0 1 1 0 0 0 4 0 0 0 2 0 0 1 1 0 3 0 0 0 0 0 13 0 1577.7573 Q15046 Q15046 408 420 KARS Lysine--tRNA ligase yes yes 2 3.0101E-05 158.34 By MS/MS 5 0 1 1 1114900 1114900 0 9220 1471 9540 22908 16133 16133 1 45826 0 LPEVIALK ILVEGIYSMEGSIVRLPEVIALKKKYKAYL MEGSIVRLPEVIALKKKYKAYLYLDEAHSI R L P L K K 1 0 0 0 0 0 1 0 0 1 2 1 0 0 1 0 0 0 0 1 0 0 8 0 881.5586 O15270 O15270 327 334 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.04858 91.9 By MS/MS 6.5 0.5 1 1 2 2153800 2153800 0 9221 166 9541 22909;22910 16134 16134 1 18130 0 LPFPIIDDR SKDINAYNCEEPTEKLPFPIIDDRNRELAI EEPTEKLPFPIIDDRNRELAILLGMLDPAE K L P D R N 0 1 0 2 0 0 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 9 0 1084.5917 P30041 P30041 98 106 PRDX6 Peroxiredoxin-6 yes yes 2 0.0077519 109.71 By MS/MS 8.5 0.5 1 1 2 1023500 1023500 0 9222 729 9542 22911;22912 16135 16135 1 80029 0 LPGDKGLVLMSR KYDGKWEVEEMKESKLPGDKGLVLMSRAKH ESKLPGDKGLVLMSRAKHHAISAKLNKPFL K L P S R A 0 1 0 1 0 0 0 2 0 0 3 1 1 0 1 1 0 0 0 1 0 0 12 1 1284.7224 P27824 P27824 114 125 CANX Calnexin yes yes 3 0.018067 77.279 By MS/MS 4 0 1 1 862520 862520 0 9223 711 9543 22913 16136 16136 488 1 23546 0 LPGEAPVIQR LRLDEALRLYLEAFRLPGEAPVIQRLLEAF LEAFRLPGEAPVIQRLLEAFTERWMNCNGS R L P Q R L 1 1 0 0 0 1 1 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 10 0 1078.6135 Q92538 Q92538 791 800 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0043802 109.48 By MS/MS 2.5 0.5 1 1 2 1161000 1161000 0 9224 2055 9544 22914;22915 16137 16137 1 44863 0 LPGELEPVQATQNK ELAEQLGLSTGEKEKLPGELEPVQATQNKT KLPGELEPVQATQNKTGKYVPPSLRDGASR K L P N K T 1 0 1 0 0 2 2 1 0 0 2 1 0 0 2 0 1 0 0 1 0 0 14 0 1522.7991 O75821 O75821 196 209 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 2.6808E-35 263.29 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 42539000 42200000 339060 9225 330 9545 22916;22917;22918;22919;22920;22921 16138;16139;16140;16141;16142 16142 5 1738100 1553400 LPGEQAEAAVEK L P E K 3 0 0 0 0 1 3 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1240.6299 REV__Q9H489 yes yes 3 0.0049258 78.903 By MS/MS 6.17 1.07 2 2 1 1 6 13476000 13476000 0 + 9226 3044 9546 22922;22923;22924;22925;22926;22927 16143;16144 16143 2 339550 0 LPIGDVATQYFADR LEKIHHSGAKVVLSKLPIGDVATQYFADRD KLPIGDVATQYFADRDMFCAGRVPEEDLKR K L P D R D 2 1 0 2 0 1 0 1 0 1 1 0 0 1 1 0 1 0 1 1 0 0 14 0 1564.7886 Q99832 Q99832 293 306 CCT7 T-complex protein 1 subunit eta yes yes 2 2.7322E-05 168.98 By MS/MS 4.57 2.44 1 1 1 1 1 1 1 7 98110000 98110000 0 9227 2295 9547 22928;22929;22930;22931;22932;22933;22934 16145;16146;16147;16148;16149;16150 16149 6 837270 0 LPIGDVATQYFADRDMFCAGR LEKIHHSGAKVVLSKLPIGDVATQYFADRD ATQYFADRDMFCAGRVPEEDLKRTMMACGG K L P G R V 3 2 0 3 1 1 0 2 0 1 1 0 1 2 1 0 1 0 1 1 0 0 21 1 2402.1147 Q99832 Q99832 293 313 CCT7 T-complex protein 1 subunit eta yes yes 3 0.018948 58.693 By MS/MS 6 0 1 1 4874900 4874900 0 9228 2295 9548 22935 16151 16151 1 38014 0 LPIVNEDDELVAIIAR LKEANEILQRSKKGKLPIVNEDDELVAIIA PIVNEDDELVAIIARTDLKKNRDYPLASKD K L P A R T 2 1 1 2 0 0 2 0 0 3 2 0 0 0 1 0 0 0 0 2 0 0 16 0 1778.9778 P12268 P12268 209 224 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.0015262 112.62 By MS/MS 6 0 1 1 807530 807530 0 9229 564 9549 22936 16152 16152 1 6297.2 0 LPKDDVHAK KKMGYYKILDVMYSRLPKDDVHAKESKINQ DVMYSRLPKDDVHAKESKINQVFHGSCITE R L P A K E 1 0 0 2 0 0 0 0 1 0 1 2 0 0 1 0 0 0 0 1 0 0 9 1 1021.5556 P78527 P78527 1884 1892 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.011791 121.73 By MS/MS 1.8 0.748 2 2 1 5 3985100 3985100 0 9230 1197 9550 22937;22938;22939;22940;22941 16153;16154;16155 16155 3 195210 0 LPLATIVK PKAAKTPLKIHPLVRLPLATIVKDLVAQAP KIHPLVRLPLATIVKDLVAQAPLKPKTPRG R L P V K D 1 0 0 0 0 0 0 0 0 1 2 1 0 0 1 0 1 0 0 1 0 0 8 0 853.56369 O94776 O94776 515 522 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.04858 91.9 By MS/MS 5 0 1 1 1716700 1716700 0 9231 349 9551 22942 16156 16156 1 70563 0 LPLFGLGR ADVRRESRLLQLLGRLPLFGLGRLVTRKSW LLQLLGRLPLFGLGRLVTRKSWLWQHDEPC R L P G R L 0 1 0 0 0 0 0 2 0 0 3 0 0 1 1 0 0 0 0 0 0 0 8 0 871.52797 P82930 P82930 71 78 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 0.022687 103.29 By MS/MS 8 0 1 1 6073900 6073900 0 9232 1209 9552 22943 16157 16157 1 400690 0 LPLMECVQMTK TPACVVTLSGNQSVRLPLMECVQMTKEVQK QSVRLPLMECVQMTKEVQKAMDDKRFDEAT R L P T K E 0 0 0 0 1 1 1 0 0 0 2 1 2 0 1 0 1 0 0 1 0 0 11 0 1348.6553 P17858 P17858 346 356 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 2 0.011157 77.662 By MS/MS 1 0 1 1 5817200 5817200 0 9233 617 9553 22944 16158 16158 402;403 1 284220 0 LPLQDVYK DCILPPTRPTDKPLRLPLQDVYKIGGIGTV PTDKPLRLPLQDVYKIGGIGTVPVGRVETG R L P Y K I 0 0 0 1 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 8 0 974.54368 Q5VTE0;P68104;Q05639 Q5VTE0 248 255 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.015988 111.95 By MS/MS By MS/MS 5.9 2.84 1 1 1 2 2 1 1 1 8 2 77083000 76875000 207610 9234 1184 9554 22945;22946;22947;22948;22949;22950;22951;22952;22953;22954 16159;16160;16161;16162;16163;16164 16162 6 1909300 826450 LPLQLDDAVRPEAEGEEEGR LHVQKIYVISLAEPRLPLQLDDAVRPEAEG DDAVRPEAEGEEEGRATVNQDTRLDNRVID R L P G R A 2 2 0 2 0 1 5 2 0 0 3 0 0 0 2 0 0 0 0 1 0 0 20 1 2222.0815 P14868 P14868 152 171 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.00028406 109.42 By MS/MS 3.8 2.32 1 1 1 1 1 5 15287000 15287000 0 9235 594 9555 22955;22956;22957;22958;22959 16165;16166 16165 2 152420 0 LPLQLDDAVRPEAEGEEEGRATVNQDTR LHVQKIYVISLAEPRLPLQLDDAVRPEAEG EGEEEGRATVNQDTRLDNRVIDLRTSTSQA R L P T R L 3 3 1 3 0 2 5 2 0 0 3 0 0 0 2 0 2 0 0 2 0 0 28 2 3107.5119 P14868 P14868 152 179 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.039273 40.718 By MS/MS 6 0 1 1 3807500 3807500 0 9236 594 9556 22960 16167 16167 1 29691 0 LPLVNSYTR FLTPLLRNIIISLARLPLVNSYTRVPPLVW IISLARLPLVNSYTRVPPLVWKLGWSPKPG R L P T R V 0 1 1 0 0 0 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 0 9 0 1061.5869 P42858 P42858 2402 2410 HTT Huntingtin yes yes 2 0.046229 82.426 By MS/MS 1.5 0.5 1 1 2 424010 424010 0 9237 858 9557 22961;22962 16168 16168 1 20834 0 LPLVTPHTQCR GKKKKKTKGPDAASKLPLVTPHTQCRLKLL AASKLPLVTPHTQCRLKLLKLERIKDYLLM K L P C R L 0 1 0 0 1 1 0 0 1 0 2 0 0 0 2 0 2 0 0 1 0 0 11 0 1320.6972 P62191 P62191 49 59 PSMC1 26S protease regulatory subunit 4 yes yes 2;3 0.0045935 109.66 By MS/MS 6 0 2 2 9701400 9701400 0 9238 1116 9558 22963;22964 16169;16170 16170 2 75652 0 LPNFGFVVFDDSEPVQR NVVELRINTKGVGGKLPNFGFVVFDDSEPV NFGFVVFDDSEPVQRILIAKPIMFRGEVRL K L P Q R I 0 1 1 2 0 1 1 1 0 0 1 0 0 3 2 1 0 0 0 3 0 0 17 0 1964.9632 Q9UN86 Q9UN86 371 387 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 2 1.352E-10 206.45 By MS/MS 6 0 1 1 824920 824920 0 9239 2837 9559 22965 16171 16171 1 6432.8 0 LPPKSEVSSDEDIQFR KDLNSDMDSILASLKLPPKSEVSSDEDIQF PPKSEVSSDEDIQFRLVTRFVNEAVMCLQE K L P F R L 0 1 0 2 0 1 2 0 0 1 1 1 0 1 2 3 0 0 0 1 0 0 16 1 1845.9109 P40939 P40939 661 676 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 0.011758 75.018 By MS/MS 5 0 1 1 1284100 1284100 0 9240 835 9560 22966 16172 16172 1 52782 0 LPPTPLLLFPEEEATNGR GELVESLKRFCASTRLPPTPLLLFPEEEAT TPLLLFPEEEATNGREGLLRFSSWPFSIQD R L P G R E 1 1 1 0 0 0 3 1 0 0 4 0 0 1 4 0 2 0 0 0 0 0 18 0 1993.052 Q9Y679 Q9Y679 151 168 AUP1 Ancient ubiquitous protein 1 yes yes 2;3 0.00061641 118.76 By MS/MS 7 0.707 1 2 1 4 4628000 4628000 0 9241 2997 9561 22967;22968;22969;22970 16173;16174;16175 16173 3 83251 0 LPPVLAIQLK CNKKVDTVKRLLIKKLPPVLAIQLKRFDYD LLIKKLPPVLAIQLKRFDYDWERECAIKFN K L P L K R 1 0 0 0 0 1 0 0 0 1 3 1 0 0 2 0 0 0 0 1 0 0 10 0 1090.7114 Q93008 Q93008 1789 1798 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0027574 114.78 By MS/MS 2 0.816 1 1 1 3 443590 443590 0 9242 2096 9562 22971;22972;22973 16176;16177 16176 2 18134 0 LPQPEEGATYEGIQK MVQAVRLIAEGKAPRLPQPEEGATYEGIQK LPQPEEGATYEGIQKKETAKINWDQPAEAI R L P Q K K 1 0 0 0 0 2 3 2 0 1 1 1 0 0 2 0 1 0 1 0 0 0 15 0 1658.8152 O75891 O75891 191 205 ALDH1L1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 2 9.4865E-10 180.61 By MS/MS 4 0 1 1 1743000 1743000 0 9243 336 9563 22974 16178 16178 1 47582 0 LPQPEEGATYEGIQKK MVQAVRLIAEGKAPRLPQPEEGATYEGIQK PQPEEGATYEGIQKKETAKINWDQPAEAIH R L P K K E 1 0 0 0 0 2 3 2 0 1 1 2 0 0 2 0 1 0 1 0 0 0 16 1 1786.9101 O75891 O75891 191 206 ALDH1L1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 3 0.0078422 87.447 By MS/MS 3 1.41 1 1 1 1 1 5 4868600 4868600 0 9244 336 9564 22975;22976;22977;22978;22979 16179 16179 1 142650 0 LPQTSDDEK IIDGVKVQVHTRRPKLPQTSDDEKKDF___ HTRRPKLPQTSDDEKKDF____________ K L P E K K 0 0 0 2 0 1 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 9 0 1031.4771 Q9GZT3 Q9GZT3 98 106 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 0.0053783 114.89 By MS/MS By matching 10 0 2 1 1 659330 597860 61473 9245 2443 9565 22980;22981 16180 16180 1 635460 1576700 LPQTSDDEKK IIDGVKVQVHTRRPKLPQTSDDEKKDF___ TRRPKLPQTSDDEKKDF_____________ K L P K K D 0 0 0 2 0 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 10 1 1159.5721 Q9GZT3 Q9GZT3 98 107 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2;3 0.0021317 142.98 By MS/MS 10 0 2 2 443230 443230 0 9246 2443 9566 22982;22983 16181;16182 16182 2 471110 0 LPQTSDDEKKDF IIDGVKVQVHTRRPKLPQTSDDEKKDF___ RPKLPQTSDDEKKDF_______________ K L P D F - 0 0 0 3 0 1 1 0 0 0 1 2 0 1 1 1 1 0 0 0 0 0 12 2 1421.6674 Q9GZT3 Q9GZT3 98 109 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2;3 0.00071701 158.06 By MS/MS By matching 10 0 3 2 1 14678000 14549000 128670 9247 2443 9567 22984;22985;22986 16183;16184 16184 2 15464000 3300200 LPSAQTPNGTDYVASGK QTTSQSSKQPPPSIRLPSAQTPNGTDYVAS SAQTPNGTDYVASGKSIQTPQSHGTLTAEL R L P G K S 2 0 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 1 1 0 0 17 0 1704.8319 Q9Y520 Q9Y520 1960 1976 PRRC2C Protein PRRC2C yes yes 2 1.118E-06 145.61 By MS/MS 2 0.816 1 1 1 3 383350 383350 0 9248 2963 9568 22987;22988;22989 16185;16186 16185 2 16384 0 LPSDVVTAVR NADKLGIILRNELMKLPSDVVTAVRGKGLL NELMKLPSDVVTAVRGKGLLNAIVIKETKD K L P V R G 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 3 0 0 10 0 1055.5975 P04181 P04181 363 372 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.00081113 131.62 By MS/MS 6.5 0.5 1 1 2 10319000 10319000 0 9249 447 9569 22990;22991 16187 16187 1 168420 0 LPSGQYLQR HKLLAQGLIKGQTFRLPSGQYLQREEVDLT KGQTFRLPSGQYLQREEVDLTGSVPVHAKT R L P Q R E 0 1 0 0 0 2 0 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 9 0 1060.5665 Q15031 Q15031 606 614 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.001203 138.4 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 16411000 16375000 36457 9250 1467 9570 22992;22993;22994;22995;22996 16188;16189 16188 2 384660 76179 LPSIPLVPVSAQK TRALMDSLGPEWRLKLPSIPLVPVSAQKRW LKLPSIPLVPVSAQKRWNSLPSENHKEMAK K L P Q K R 1 0 0 0 0 1 0 0 0 1 2 1 0 0 3 2 0 0 0 2 0 0 13 0 1347.8126 Q15785 Q15785 144 156 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 0.029961 79.07 By MS/MS 8 0 1 1 714390 714390 0 9251 1521 9571 22997 16190 16190 1 47128 0 LPSNTLDR GLQLIIRNFWSHETRLPSNTLDRLLALNSL FWSHETRLPSNTLDRLLALNSLYSPKIEVH R L P D R L 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 0 0 8 0 914.48214 P78527 P78527 2531 2538 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.013709 114.89 By MS/MS 2.5 1.12 1 1 1 1 4 6951700 6951700 0 9252 1197 9572 22998;22999;23000;23001 16191;16192 16191 2 333420 0 LPSPLDITAER WLPISHAVLAMVCQKLPSPLDITAERVERL VCQKLPSPLDITAERVERLMCTGSQTFDSF K L P E R V 1 1 0 1 0 0 1 0 0 1 2 0 0 0 2 1 1 0 0 0 0 0 11 0 1210.6558 Q7Z2Z2 Q7Z2Z2 363 373 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 2 0.00035707 148.56 By MS/MS 3 0 1 1 466090 466090 0 9253 1779 9573 23002 16193 16193 1 12167 0 LPSRPGAQGVEPQNLR VQPSPAHVGQQGLSKLPSRPGAQGVEPQNL PSRPGAQGVEPQNLRTLQGHSVIRSATNTT K L P L R T 1 2 1 0 0 2 1 2 0 0 2 0 0 0 3 1 0 0 0 1 0 0 16 1 1717.9224 Q8WXI9 Q8WXI9 225 240 GATAD2B Transcriptional repressor p66-beta yes yes 3 0.0056277 88.311 By MS/MS 5 0 1 1 1989500 1989500 0 9254 2047 9574 23003 16194 16194 1 81776 0 LPSSIEYSDLSR HNGYYRSLYLLINSKLPSSIEYSDLSRVPI NSKLPSSIEYSDLSRVPIAKILLENVLKPL K L P S R V 0 1 0 1 0 0 1 0 0 1 2 0 0 0 1 4 0 0 1 0 0 0 12 0 1365.6776 Q15386 Q15386 219 230 UBE3C Ubiquitin-protein ligase E3C yes yes 2 4.4919E-11 205.13 By MS/MS 4 0 1 1 4227700 4227700 0 9255 1494 9575 23004 16195 16195 1 115410 0 LPTDASEDADQPAGDSAILLR SEPDLRDLLLFLAERLPTDASEDADQPAGD EDADQPAGDSAILLRAIGSQIRDQLALPWV R L P L R A 4 1 0 4 0 1 1 1 0 1 3 0 0 0 2 2 1 0 0 0 0 0 21 0 2154.0441 O60826 O60826 108 128 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 1.0176E-12 166.67 By MS/MS 5 0 1 1 1068100 1068100 0 9256 268 9576 23005 16196 16196 1 43903 0 LPTFGAPEQLVDLK KKSKKPPPVPALPSKLPTFGAPEQLVDLKQ KLPTFGAPEQLVDLKQAGLEAAAKATSSHP K L P L K Q 1 0 0 1 0 1 1 1 0 0 3 1 0 1 2 0 1 0 0 1 0 0 14 0 1526.8344 Q14258 Q14258 403 416 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0030665 128.68 By MS/MS 6 0 1 1 1120900 1120900 0 9257 1427 9577 23006 16197 16197 1 8740.9 0 LPTGTTLESAGVVCPYR GWGYLVPGRRDNLAKLPTGTTLESAGVVCP TGTTLESAGVVCPYRAIESLYRKHCLEQGK K L P Y R A 1 1 0 0 1 0 1 2 0 0 2 0 0 0 2 1 3 0 1 2 0 0 17 0 1819.9138 P54098 P54098 634 650 POLG DNA polymerase subunit gamma-1 yes yes 2 2.4996E-33 241.15 By MS/MS 3 0 1 1 1152900 1152900 0 9258 1011 9578 23007 16198 16198 1 30096 0 LPVALDPGAK ETKIKGKSGRFFTVKLPVALDPGAKISVIV FFTVKLPVALDPGAKISVIVETVYTHVLHP K L P A K I 2 0 0 1 0 0 0 1 0 0 2 1 0 0 2 0 0 0 0 1 0 0 10 0 979.57023 P04843 P04843 117 126 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.055348 77.732 By MS/MS 2 0.816 1 1 1 3 477670 477670 0 9259 458 9579 23008;23009;23010 16199 16199 1 20903 0 LPVEAFSAVFTK RTVSARAARDSTVLRLPVEAFSAVFTKYPE VLRLPVEAFSAVFTKYPESLVRVVQIIMVR R L P T K Y 2 0 0 0 0 0 1 0 0 0 1 1 0 2 1 1 1 0 0 2 0 0 12 0 1307.7125 Q8IY17 Q8IY17 296 307 PNPLA6 Neuropathy target esterase yes yes 2 0.0065245 100.88 By MS/MS 3 0 1 1 99296 99296 0 9260 1876 9580 23011 16200 16200 1 2592.1 0 LPVEDKIR AAQAPSSFQLLYDLKLPVEDKIRIIAQKIY QLLYDLKLPVEDKIRIIAQKIYGADDIELL K L P I R I 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 8 1 968.56548 P11586 P11586 820 827 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 3 0.037889 80.438 By MS/MS 4 0 1 1 756680 756680 0 9261 556 9581 23012 16201 16201 1 20657 0 LPVGTTATLYFR DPKGKSLKDEDVLQKLPVGTTATLYFRDLG LQKLPVGTTATLYFRDLGAQISWVTVFLTE K L P F R D 1 1 0 0 0 0 0 1 0 0 2 0 0 1 1 0 3 0 1 1 0 0 12 0 1337.7343 Q9NZ01 Q9NZ01 68 79 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.002154 120.27 By MS/MS 2 0.816 1 1 1 3 556690 556690 0 9262 2703 9582 23013;23014;23015 16202;16203 16203 2 24281 0 LPVLAGCLK GELKTQMTSAVREPKLPVLAGCLKGLSSLL AVREPKLPVLAGCLKGLSSLLCNFTKSMEE K L P L K G 1 0 0 0 1 0 0 1 0 0 3 1 0 0 1 0 0 0 0 1 0 0 9 0 969.56812 P78527 P78527 217 225 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0084283 108.24 By MS/MS 3 1.41 1 1 1 1 1 5 6576200 6576200 0 9263 1197 9583 23016;23017;23018;23019;23020 16204;16205;16206;16207;16208 16205 5 290240 0 LPVLYQVER VHSLHCYFVRAGDPKLPVLYQVERTRTGSS RAGDPKLPVLYQVERTRTGSSFSVRSVKAV K L P E R T 0 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 9 0 1115.6339 O14734 O14734 92 100 ACOT8 Acyl-coenzyme A thioesterase 8 yes yes 2 0.039237 85.862 By MS/MS 8 0 1 1 2732100 2732100 0 9264 122 9584 23021 16209 16209 1 180240 0 LPVSLSQQK VLLNDGILRKELRKKLPVSLSQQKLLTWLS KELRKKLPVSLSQQKLLTWLSVLECVEVFM K L P Q K L 0 0 0 0 0 2 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 9 0 998.57605 Q9Y5Y5 Q9Y5Y5 73 81 PEX16 Peroxisomal membrane protein PEX16 yes yes 2 0.030852 90.601 By MS/MS 7 0 1 1 1342000 1342000 0 9265 2988 9585 23022 16210 16210 1 23982 0 LPVSSLTISR LADLASLMDKTFERKLPVSSLTISRLIDNI TFERKLPVSSLTISRLIDNISSREEIDHAE K L P S R L 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 3 1 0 0 1 0 0 10 0 1071.6288 Q92552 Q92552 65 74 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.00087065 128.86 By MS/MS 7.5 0.5 1 1 2 2698700 2698700 0 9266 2059 9586 23023;23024 16211 16211 1 69355 0 LPVVVPLHSLDEK RDLIEFGMIPEFVGRLPVVVPLHSLDEKTL GRLPVVVPLHSLDEKTLVQILTEPRNAVIP R L P E K T 0 0 0 1 0 0 1 0 1 0 3 1 0 0 2 1 0 0 0 3 0 0 13 0 1444.829 O76031 O76031 500 512 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2;3 0.0018242 134.84 By MS/MS 5.8 0.748 2 2 1 5 8617500 8617500 0 9267 344 9587 23025;23026;23027;23028;23029 16212;16213;16214;16215 16215 4 172100 0 LPYCQIATEK PPTLPRPAVAILSFKLPYCQIATEKGQMEE ILSFKLPYCQIATEKGQMEEQFWRSVIFHN K L P E K G 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 0 1221.6064 O75717 O75717 713 722 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.00097839 123.86 By MS/MS 3 0 1 1 1021700 1021700 0 9268 325 9588 23030 16216 16216 1 26673 0 LPYVPEPYYPESGWDR AVTADSEVLEERQKRLPYVPEPYYPESGWD PYVPEPYYPESGWDRLRELFGKDEQQRISK R L P D R L 0 1 0 1 0 0 2 1 0 0 1 0 0 0 4 1 0 1 3 1 0 0 16 0 1966.9101 Q9NPL8 Q9NPL8 42 57 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 0.011554 89.959 By MS/MS 8 0 1 1 375510 375510 0 9269 2583 9589 23031 16217 16217 1 24772 0 LQAAGNAVK ACKVKADQDSEAMKRLQAAGNAVKRASDNL SEAMKRLQAAGNAVKRASDNLVKAAQKAAA R L Q V K R 3 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 0 870.49232 Q9Y490;Q9Y4G6 Q9Y490 2456 2464 TLN1;TLN2 Talin-1;Talin-2 yes no 2 0.010203 104.37 By MS/MS 1.5 0.5 1 1 2 1332800 1332800 0 9270 2947 9590 23032;23033 16218 16218 1 66219 0 LQADDLLEWER L Q E R 1 1 0 2 0 1 2 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 11 0 1386.6779 REV__Q8TAW3 yes yes 2 0.0017312 123.86 By MS/MS 7.17 1.34 1 1 1 2 1 6 45720000 45720000 0 + 9271 3037 9591 23034;23035;23036;23037;23038;23039 16219 16219 1 609590 0 LQAEAQELLGYQVDPR ENWEKAQADKERRARLQAEAQELLGYQVDP QAEAQELLGYQVDPRSARFQELLQDLEKKE R L Q P R S 2 1 0 1 0 3 2 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 16 0 1828.9319 Q8TAE8 Q8TAE8 156 171 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2;3 1.2019E-28 233.28 By MS/MS 9 0 2 2 1919600 1919600 0 9272 1980 9592 23040;23041 16220;16221 16220 2 1101700 0 LQAEAQQLR KELEVAEGGKAELERLQAEAQQLRKEERSW KAELERLQAEAQQLRKEERSWEQKLEEMRK R L Q L R K 2 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1055.5724 Q16543 Q16543 84 92 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 2 0.00019469 164.46 By MS/MS 6.5 0.5 1 1 2 14435000 14435000 0 9273 1539 9593 23042;23043 16222;16223 16222 2 137470 0 LQAFSAAIESCNK LRLASHLNLAMCHLKLQAFSAAIESCNKAL LKLQAFSAAIESCNKALELDSNNEKGLFRR K L Q N K A 3 0 1 0 1 1 1 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1437.6922 Q02790 Q02790 332 344 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 4.5665E-31 280.38 By MS/MS 6 0 1 1 0 0 0 9274 1255 9594 23044 16224 16224 1 0 0 LQAGDAPSVGGSCR RSSPLSWRYGQSSPRLQAGDAPSVGGSCRS RLQAGDAPSVGGSCRSEGTPAWYMHGERAH R L Q C R S 2 1 0 1 1 1 0 3 0 0 1 0 0 0 1 2 0 0 0 1 0 0 14 0 1373.6358 Q8NEY1 Q8NEY1 325 338 NAV1 Neuron navigator 1 yes yes 2 0.0048579 104.59 By MS/MS 2 0 1 1 287390 287390 0 9275 1966 9595 23045 16225 16225 1 14285 0 LQAGEETASHYR VELARANRLCREAMRLQAGEETASHYRMAA AMRLQAGEETASHYRMAALEQCLSEP____ R L Q Y R M 2 1 0 0 0 1 2 1 1 0 1 0 0 0 0 1 1 0 1 0 0 0 12 0 1360.6371 Q9UBB6 Q9UBB6 707 718 NCDN Neurochondrin yes yes 2;3 0.0025639 119.74 By MS/MS By matching 5 0 3 2 1 3762900 3749800 13163 9276 2745 9596 23046;23047;23048 16226;16227 16227 2 154130 38950 LQAGEYVSLGK DGCLKIIDRKKDLVKLQAGEYVSLGKVEAA DLVKLQAGEYVSLGKVEAALKNLPLVDNIC K L Q G K V 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1163.6186 O95573;O60488 O95573 586 596 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 no no 2 0.0032002 115.29 By MS/MS 5 0 1 1 9771500 9771500 0 9277 400;248 9597 23049 16228 16228 1 401650 0 LQAQQDAVNIVCHSK DNSEYMRNGDFLPTRLQAQQDAVNIVCHSK LQAQQDAVNIVCHSKTRSNPENNVGLITLA R L Q S K T 2 0 1 1 1 3 0 0 1 1 1 1 0 0 0 1 0 0 0 2 0 0 15 0 1709.8519 P55036 P55036 26 40 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 3 0.0049624 89.466 By MS/MS 6.5 0.5 1 1 2 13607000 13607000 0 9278 1023 9598 23050;23051 16229 16229 1 108890 0 LQAQRNELNAK ELQLIVNDKSQNLRRLQAQRNELNAKVRLL NLRRLQAQRNELNAKVRLLREELQLLQEQG R L Q A K V 2 1 2 0 0 2 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 1 1283.6946 P62195 P62195 45 55 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0020438 151.83 By MS/MS 7 0 1 1 965270 965270 0 9279 1117 9599 23052 16230 16230 1 17250 0 LQATEVR SSHVRGVGSRGFPLRLQATEVRICPVEFNP GSRGFPLRLQATEVRICPVEFNPNFVARMI R L Q V R I 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 815.45012 Q9UI30 Q9UI30 25 31 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 2 0.050113 101.33 By MS/MS By matching 10 0 2 1 1 1470700 1434300 36371 9280 2788 9600 23053;23054 16231 16231 1 1524500 932900 LQAVLADNQQLR SRRKKKEYLQGLEARLQAVLADNQQLRREN EARLQAVLADNQQLRRENAALRRRLEALLA R L Q L R R 2 1 1 1 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 12 0 1367.7521 Q99941 Q99941 357 368 ATF6B Cyclic AMP-dependent transcription factor ATF-6 beta;Processed cyclic AMP-dependent transcription factor ATF-6 beta yes yes 2 7.3327E-05 160.91 By MS/MS 4 0 1 1 852430 852430 0 9281 2297 9601 23055 16232 16232 1 23270 0 LQAVQAR THIRLAHGFSNHRKRLQAVQARLHAISILV GFSNHRKRLQAVQARLHAISILVYSNALQE R L Q A R L 2 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 784.45554 Q7Z6Z7 Q7Z6Z7 274 280 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.030534 114.59 By MS/MS 1.5 0.5 1 1 2 518720 518720 0 9282 1803 9602 23056;23057 16233 16233 1 25565 0 LQAYTSVSK GEVFDFRGMRLDWFRLQAYTSVSKASLGLA RLDWFRLQAYTSVSKASLGLADHRELGKMM R L Q S K A 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 9 0 995.52876 Q9Y2A7 Q9Y2A7 493 501 NCKAP1 Nck-associated protein 1 yes yes 2 0.043156 83.647 By MS/MS 4 0 1 1 533070 533070 0 9283 2882 9603 23058 16234 16234 1 14552 0 LQDAINILK GKYVGLVRVLAKHGKLQDAINILKEMKEKD LAKHGKLQDAINILKEMKEKDVLIKDTTAL K L Q L K E 1 0 1 1 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1026.6073 P42704 P42704 764 772 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00019469 164.46 By MS/MS 3 1.41 1 1 1 1 1 5 69603000 69603000 0 9284 854 9604 23059;23060;23061;23062;23063 16235;16236;16237;16238 16238 4 1884600 0 LQDAINILKEMK GKYVGLVRVLAKHGKLQDAINILKEMKEKD HGKLQDAINILKEMKEKDVLIKDTTALSFF K L Q M K E 1 0 1 1 0 1 1 0 0 2 2 2 1 0 0 0 0 0 0 0 0 0 12 1 1414.7854 P42704 P42704 764 775 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.0011826 159.99 By MS/MS 3 0 2 2 6177900 6177900 0 9285 854 9605 23064;23065 16239;16240 16239 610 2 161280 0 LQDAYYIFQEMADK QLATAWVSLATGGEKLQDAYYIFQEMADKC KLQDAYYIFQEMADKCSPTLLLLNGQAACH K L Q D K C 2 0 0 2 0 2 1 0 0 1 1 1 1 1 0 0 0 0 2 0 0 0 14 0 1733.7971 O14579 O14579 198 211 COPE Coatomer subunit epsilon yes yes 2 3.0918E-06 173.06 By MS/MS 8 0 2 2 1212400 1212400 0 9286 115 9606;9607 23066;23067 16241;16242 16241 76 2 79985 0 LQDEFENR GQKQSTTFRRLLISKLQDEFENRTRNVDVY RRLLISKLQDEFENRTRNVDVYDKRENPLL K L Q N R T 0 1 1 1 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 1049.4778 P78344 P78344 171 178 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0010357 172.25 By MS/MS By matching 4.33 0.471 2 1 2 1 14773000 14751000 21708 9287 1192 9608 23068;23069;23070 16243 16243 1 410860 45361 LQDLATQLQEK AAQAHTRELGRENRRLQDLATQLQEKHHRI ENRRLQDLATQLQEKHHRISLEYSELQDKV R L Q E K H 1 0 0 1 0 3 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 11 0 1285.6878 O75150 O75150 240 250 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.00012553 157.97 By MS/MS 3 0 1 1 1083500 1083500 0 9288 283 9609 23071 16244 16244 1 28286 0 LQDLLETK VYEMKLSTLASKESRLQDLLETKALALAQA LASKESRLQDLLETKALALAQADRLIAQHR R L Q T K A 0 0 0 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 0 958.53351 Q8TCG1 Q8TCG1 640 647 KIAA1524 Protein CIP2A yes yes 2 0.0012844 168.26 By MS/MS 4 0 1 1 2489900 2489900 0 9289 1994 9610 23072 16245 16245 1 67972 0 LQDLVSPVYSYLWTRPAVGR YVERILLLRQGHICRLQDLVSPVYSYLWTR SPVYSYLWTRPAVGRAQLDAISEKVDVIAK R L Q G R A 1 2 0 1 0 1 0 1 0 0 3 0 0 0 2 2 1 1 2 3 0 0 20 1 2319.2376 Q5JPH6 Q5JPH6 413 432 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 3 0.0030065 78.501 By MS/MS 6 0 1 1 1247200 1247200 0 9290 1604 9611 23073 16246 16246 1 9725.9 0 LQDVGNEQFLEEEGK DDILEKTWNMSVSEKLQDVGNEQFLEEEGK LQDVGNEQFLEEEGKAVLNFSASGSVISLT K L Q G K A 0 0 1 1 0 2 4 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 15 0 1733.8108 Q8IYQ7 Q8IYQ7 103 117 THNSL1 Threonine synthase-like 1 yes yes 2 1.728E-14 206.46 By MS/MS 5 0 1 1 3456800 3456800 0 9291 1882 9612 23074 16247 16247 1 142090 0 LQEALNLFK SSYNMVIREDNQTNRLQEALNLFKSIWNNR DNQTNRLQEALNLFKSIWNNRWLRTISVIL R L Q F K S 1 0 1 0 0 1 1 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 9 0 1074.6073 P63092;Q5JWF2 P63092 266 274 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 1.9371E-08 209.58 By MS/MS 7.5 0.5 1 1 2 3620700 3620700 0 9292 1168 9613 23075;23076 16248 16248 1 72138 0 LQEEEQKKEELAR AEVEAQKAQQLEEARLQEEEQKKEELARLR ARLQEEEQKKEELARLRRELVHKANPIRKY R L Q A R L 1 1 0 0 0 2 5 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 13 2 1628.837 Q9ULW0 Q9ULW0 694 706 TPX2 Targeting protein for Xklp2 yes yes 3 0.035372 71.529 By MS/MS 4 0 1 1 331520 331520 0 9293 2828 9614 23077 16249 16249 1 9050.3 0 LQEEHSLQDVIFK QQKEWQRMLQLIQSRLQEEHSLQDVIFKSA SRLQEEHSLQDVIFKSAFKSTSTALPPRED R L Q F K S 0 0 0 1 0 2 2 0 1 1 2 1 0 1 0 1 0 0 0 1 0 0 13 0 1584.8148 Q96RQ1 Q96RQ1 134 146 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 yes yes 2;3 0.00012669 153.49 By MS/MS 6.5 0.5 2 2 4 5671300 5671300 0 9294 2248 9615 23078;23079;23080;23081 16250;16251 16251 2 87067 0 LQEELAASDR ESEKRLKGLEAEVLRLQEELAASDRARRQA AEVLRLQEELAASDRARRQAQQDRDEMADE R L Q D R A 2 1 0 1 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1130.5568 Q7Z406 Q7Z406 1709 1718 MYH14 Myosin-14 yes yes 2 0.027117 91.937 By MS/MS 2 0 1 1 0 0 0 9295 1788 9616 23082 16252 16252 1 0 0 LQEELNTTDLYSYR PDFFLPEAMHRFTSRLQEELNTTDLYSYRK RLQEELNTTDLYSYRKVTDNISSCMENFNL R L Q Y R K 0 1 1 1 0 1 2 0 0 0 3 0 0 0 0 1 2 0 2 0 0 0 14 0 1743.8315 Q6YHU6 Q6YHU6 122 135 THADA Thyroid adenoma-associated protein yes yes 2 0.00012185 145.29 By MS/MS 2 0 1 1 124460 124460 0 9296 1737 9617 23083 16253 16253 1 6186.5 0 LQEELSAATDR DLQTKIDGLEKTNSKLQEELSAATDRICSL TNSKLQEELSAATDRICSLQEEQQQLREQN K L Q D R I 2 1 0 1 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1231.6044 Q96T51 Q96T51 339 349 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 0.0055414 105.46 By MS/MS 5 0 1 1 868850 868850 0 9297 2259 9618 23084 16254 16254 1 35713 0 LQEELSENDKK RSAEELKEMQDKVIKLQEELSENDKKIKAL KVIKLQEELSENDKKIKALNHEIEELEKRK K L Q K K I 0 0 1 1 0 1 3 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1331.6569 O95347 O95347 263 273 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0012193 150.27 By MS/MS 3 0 1 1 376010 376010 0 9298 385 9619 23085 16255 16255 1 9815.8 0 LQEESEVLQK KSVDRSLLFLDNCLRLQEESEVLQKSVIIG DNCLRLQEESEVLQKSVIIGVIEGGDVMEE R L Q Q K S 0 0 0 0 0 2 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1201.619 Q9H974 Q9H974 177 186 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes yes 2 0.0051751 106.88 By MS/MS 7 0 1 1 1019000 1019000 0 9299 2530 9620 23086 16256 16256 1 18209 0 LQEIEEFK DDVIQRKRELWPPEKLQEIEEFKERLRKRR ELWPPEKLQEIEEFKERLRKRREEKLLRDA K L Q F K E 0 0 0 0 0 1 3 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 1034.5284 P0DJ07 P0DJ07 47 54 PET100 Protein PET100 homolog, mitochondrial yes yes 2 0.023634 101.46 By MS/MS 10 0 1 1 251840 251840 0 9300 526 9621 23087 16257 16257 1 267680 0 LQEIFTEK DEVRQIEGRVVEISRLQEIFTEKVLQQEAE RVVEISRLQEIFTEKVLQQEAEIDSIHQLV R L Q E K V 0 0 0 0 0 1 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 8 0 1006.5335 Q9P2W9 Q9P2W9 266 273 STX18 Syntaxin-18 yes yes 2 0.0047436 138.06 By MS/MS 7 0 1 1 8915300 8915300 0 9301 2742 9622 23088 16258 16258 1 159320 0 LQEIHPECGPCK QYMLNAGLAKVVSLRLQEIHPECGPCKTKK SLRLQEIHPECGPCKTKKGTDVMVRCLKLL R L Q C K T 0 0 0 0 2 1 2 1 1 1 1 1 0 0 2 0 0 0 0 0 0 0 12 0 1466.6646 Q12789 Q12789 310 321 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.022509 83.081 By MS/MS 2 0 1 1 84855 84855 0 9302 1306 9623 23089 16259 16259 1 4217.7 0 LQEIYNR SNVDEGIYQLEKGARLQEIYNRMDPRAQTP YQLEKGARLQEIYNRMDPRAQTPVPGKGPF R L Q N R M 0 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 7 0 934.48723 Q92974 Q92974 442 448 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.017752 132.57 By MS/MS 4 0 1 1 1173600 1173600 0 9303 2094 9624 23090 16260 16260 1 32038 0 LQELAELEAK VIEKQLERKGMSKRRLQELAELEAKKAKMK MSKRRLQELAELEAKKAKMKGTLIDNQFK_ R L Q A K K 2 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1142.6183 Q9H5V9 Q9H5V9 199 208 CXorf56 UPF0428 protein CXorf56 yes yes 2 0.0078435 100.82 By MS/MS 8 0 1 1 1412800 1412800 0 9304 2506 9625 23091 16261 16261 1 93204 0 LQELEGAVK ARQQLERQNKELKAKLQELEGAVKSKFKAT KELKAKLQELEGAVKSKFKATISALEAKIG K L Q V K S 1 0 0 0 0 1 2 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 9 0 985.54441 P35580 P35580 1801 1809 MYH10 Myosin-10 yes yes 2 0.031826 99.815 By MS/MS 2 0 1 1 241630 241630 0 9305 794 9626 23092 16262 16262 1 12010 0 LQELEGQIADLK KDANQAKLSERRRKRLQELEGQIADLKKKL RKRLQELEGQIADLKKKLNEQSKLLKLKES R L Q L K K 1 0 0 1 0 2 2 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1355.7296 O95239 O95239 602 613 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 5.2779E-07 179.94 By MS/MS 2.5 0.5 1 1 2 823200 823200 0 9306 378 9627 23093;23094 16263 16263 1 22802 0 LQELESCSGLGSTSDDTDVR LPSDSEAPDLKQEERLQELESCSGLGSTSD SCSGLGSTSDDTDVREVSSRPSTPGLSVVS R L Q V R E 0 1 0 3 1 1 2 2 0 0 3 0 0 0 0 4 2 0 0 1 0 0 20 0 2167.9539 Q14C86 Q14C86 735 754 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 2.3476E-12 164.93 By MS/MS 2.5 0.5 1 1 2 720580 720580 0 9307 1455 9628 23095;23096 16264;16265 16265 2 28980 0 LQELNYNLK KTGVQFTVKLRLLVKLQELNYNLKVKVLFD LRLLVKLQELNYNLKVKVLFDKDVNERNTV K L Q L K V 0 0 2 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 9 0 1133.6081 P42224 P42224 351 359 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 0.011414 101.72 By MS/MS 5.5 1.12 1 1 1 1 4 4616500 4616500 0 9308 847 9629 23097;23098;23099;23100 16266 16266 1 148540 0 LQELSAEER PGALVIPFSGALELKLQELSAEERQKYLEA GALELKLQELSAEERQKYLEANMTQSALPK K L Q E R Q 1 1 0 0 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1073.5353 Q9NTK5 Q9NTK5 271 279 OLA1 Obg-like ATPase 1 yes yes 2 0.022213 95.483 By MS/MS 7 0 1 1 863820 863820 0 9309 2632 9630 23101 16267 16267 1 15437 0 LQELTDLLQEK AVQELNSFLAQENMRLQELTDLLQEKHRTM ENMRLQELTDLLQEKHRTMSQEFSKLQSKV R L Q E K H 0 0 0 1 0 2 2 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 11 0 1328.7187 Q5VTR2 Q5VTR2 232 242 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 1.3038E-07 193.3 By MS/MS By matching 4.33 0.471 2 1 2 1 965050 937290 27757 9310 1649 9631 23102;23103;23104 16268 16268 1 26748 58001 LQENFSLDLLK PNWDYHAEIQAFGHRLQENFSLDLLKTAFV FGHRLQENFSLDLLKTAFVNSCYIKSEEAK R L Q L K T 0 0 1 1 0 1 1 0 0 0 4 1 0 1 0 1 0 0 0 0 0 0 11 0 1318.7133 Q9H9J2 Q9H9J2 79 89 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 9.5769E-12 213.35 By MS/MS 8 0 1 1 797330 797330 0 9311 2535 9632 23105 16269;16270 16270 2 52600 0 LQETLSAADR ______________________________ CSLLRLQETLSAADRCGAALAGHQLIRGLG R L Q D R C 2 1 0 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1102.5619 P78527 P78527 15 24 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00014316 160.75 By MS/MS 2 0 1 1 5532300 5532300 0 9312 1197 9633 23106 16271 16271 1 274980 0 LQEVFGHAIK ERNKPTKNMINIISRLQEVFGHAIKAAYPD NIISRLQEVFGHAIKAAYPDLENPPLLVTP R L Q I K A 1 0 0 0 0 1 1 1 1 1 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1140.6291 P54136 P54136 80 89 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2;3 0.00099833 122.94 By MS/MS 5.33 0.471 2 1 3 9621700 9621700 0 9313 1013 9634 23107;23108;23109 16272;16273 16273 2 364720 0 LQEVIETLLSLEK DQRLPECAKLAKEGRLQEVIETLLSLEKQT GRLQEVIETLLSLEKQTRTASDMVSTSRIL R L Q E K Q 0 0 0 0 0 1 3 0 0 1 4 1 0 0 0 1 1 0 0 1 0 0 13 0 1513.8603 O00232 O00232 40 52 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 1.251E-58 290.28 By MS/MS 6 0 1 1 12821000 12821000 0 9314 81 9635 23110 16274 16274 1 99980 0 LQEVIETLLSLEKQTR DQRLPECAKLAKEGRLQEVIETLLSLEKQT QEVIETLLSLEKQTRTASDMVSTSRILVAV R L Q T R T 0 1 0 0 0 2 3 0 0 1 4 1 0 0 0 1 2 0 0 1 0 0 16 1 1899.0677 O00232 O00232 40 55 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 0.050415 56.527 By MS/MS 6 0 1 1 742690 742690 0 9315 81 9636 23111 16275 16275 1 5791.5 0 LQEYKDTCTAAYR LSAYSDQFLNMVCVKLQEYKDTCTAAYRGI VKLQEYKDTCTAAYRGIVQSEEKLVISASW K L Q Y R G 2 1 0 1 1 1 1 0 0 0 1 1 0 0 0 0 2 0 2 0 0 0 13 1 1617.7457 Q96A65 Q96A65 612 624 EXOC4 Exocyst complex component 4 yes yes 3 0.023117 71.879 By MS/MS 4 0 1 1 709860 709860 0 9316 2118 9637 23112 16276 16276 1 19378 0 LQEYLGK FLKYSKAKNLDIDPKLQEYLGKFRRLEDFR KNLDIDPKLQEYLGKFRRLEDFRVDPPMGE K L Q G K F 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 7 0 849.45962 Q6PKG0 Q6PKG0 1011 1017 LARP1 La-related protein 1 yes yes 2 0.015477 138.83 By MS/MS 3 0 1 1 756970 756970 0 9317 1719 9638 23113 16277 16277 1 19761 0 LQFFCDPR EYEAMPVEVKLLPRKLQFFCDPRKREQMLT VKLLPRKLQFFCDPRKREQMLTSPTQ____ K L Q P R K 0 1 0 1 1 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 8 0 1081.5015 Q53H12 Q53H12 404 411 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.038372 95.909 By MS/MS 7 0 1 1 674410 674410 0 9318 1587 9639 23114 16278 16278 1 12052 0 LQFHNVKPECLEAYNK HSNLLAKKETSNLYKLQFHNVKPECLEAYN QFHNVKPECLEAYNKICQEVLPKIHEDKHY K L Q N K I 1 0 2 0 1 1 2 0 1 0 2 2 0 1 1 0 0 0 1 1 0 0 16 1 1988.9778 O75323 O75323 76 91 GBAS Protein NipSnap homolog 2 yes yes 3 0.013619 95.067 By MS/MS 8 0 1 1 2074600 2074600 0 9319 296 9640 23115 16279 16279 1 136860 0 LQGATCNNNK GATLDACSFGVTGLKLQGATCNNNKLSLSN VTGLKLQGATCNNNKLSLSNAISTALPLTQ K L Q N K L 1 0 3 0 1 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1118.5139 Q14204 Q14204 4565 4574 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 7.2414E-07 186.41 By MS/MS 2.5 1.12 1 1 1 1 4 1096500 1096500 0 9320 1421 9641 23116;23117;23118;23119 16280;16281 16280 2 49609 0 LQGEFQLR AERPDVDEKRSDLLKLQGEFQLRLRQLEKS KRSDLLKLQGEFQLRLRQLEKSLLQALNEV K L Q L R L 0 1 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 989.52943 Q14204 Q14204 3734 3741 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.003423 146.81 By MS/MS 2 0.816 1 1 1 3 2613700 2613700 0 9321 1421 9642 23120;23121;23122 16282;16283;16284 16282 3 120430 0 LQGEIAHVK EIKIEISELNRVIQRLQGEIAHVKKQCKNV NRVIQRLQGEIAHVKKQCKNVQDAIADAEQ R L Q V K K 1 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 9 0 993.56073 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 406 414 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.0061127 112.11 By MS/MS By MS/MS 5 2.94 3 2 3 3 3 2 1 3 2 12 10 3873500 2643300 1230200 + 9322 52 9643 23123;23124;23125;23126;23127;23128;23129;23130;23131;23132;23133;23134;23135;23136;23137;23138;23139;23140;23141;23142;23143;23144 16285;16286;16287;16288;16289;16290;16291;16292;16293 16292 9 710960 4562800 LQGEVQR LDDTEVKKVMEECKRLQGEVQRLREENKQF KVMEECKRLQGEVQRLREENKQFKEEDGLR R L Q Q R L 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 828.44537 O95292 O95292 176 182 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.023897 119.17 By MS/MS 8 0 1 1 5200800 5200800 0 9323 381 9644 23145 16294 16294 1 343090 0 LQGEVVAFDYQSK SVGSQVSCRTCQEQRLQGEVVAFDYQSKML QRLQGEVVAFDYQSKMLALKCPSSSGKPNH R L Q S K M 1 0 0 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 13 0 1482.7355 Q3MHD2 Q3MHD2 25 37 LSM12 Protein LSM12 homolog yes yes 2 1.1834E-06 212.68 By MS/MS 9.5 0.5 1 1 2 3262000 3262000 0 9324 1568 9645 23146;23147 16295 16295 1 1893500 0 LQGGTPQEPPNPR LRDALRRSSEMLVKKLQGGTPQEPPNPRMK KKLQGGTPQEPPNPRMKRASSLNFLNKSVE K L Q P R M 0 1 1 0 0 2 1 2 0 0 1 0 0 0 4 0 1 0 0 0 0 0 13 0 1389.7001 Q9H0B6 Q9H0B6 564 576 KLC2 Kinesin light chain 2 yes yes 2 0.00029922 143.24 By MS/MS 5 0 1 1 544160 544160 0 9325 2451 9646 23148 16296 16296 1 22367 0 LQGIDLDR ELKDVERKIAQQAAKLQGIDLDRTVQQVNQ IAQQAAKLQGIDLDRTVQQVNQEKQEKQHK K L Q D R T 0 1 0 2 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 928.49779 Q92878 Q92878 816 823 RAD50 DNA repair protein RAD50 yes yes 2 0.01937 107.57 By MS/MS 3 0 1 1 781570 781570 0 9326 2083 9647 23149 16297 16297 1 20403 0 LQGILADLR TVDGSPHELESRRVKLQGILADLRDVDGLP ESRRVKLQGILADLRDVDGLPPKVTGPPPG K L Q L R D 1 1 0 1 0 1 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 9 0 997.59203 Q9NRL3 Q9NRL3 353 361 STRN4 Striatin-4 yes yes 2 0.0041727 117.53 By MS/MS 4.5 0.5 1 1 2 422230 422230 0 9327 2607 9648 23150;23151 16298 16298 1 12971 0 LQGINCGPDFTPSFANLGR DKANKTPLRPLDPTRLQGINCGPDFTPSFA NCGPDFTPSFANLGRTTLSTRGPPRGGPGG R L Q G R T 1 1 2 1 1 1 0 3 0 1 2 0 0 2 2 1 1 0 0 0 0 0 19 0 2062.9895 Q04637 Q04637 657 675 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 6.5804E-26 222.75 By MS/MS 2.25 0.433 3 1 4 2823600 2823600 0 9328 1264 9649 23152;23153;23154;23155 16299;16300;16301;16302;16303;16304;16305 16299 7 130640 0 LQGQLQGGSR DLLRRIIRILNLSKRLQGQLQGGSREITKA NLSKRLQGQLQGGSREITKAAQSLNELDYL R L Q S R E 0 1 0 0 0 3 0 3 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1042.552 Q9UP83 Q9UP83 189 198 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.00092554 126.31 By MS/MS 4.5 0.5 1 1 2 1064300 1064300 0 9329 2850 9650 23156;23157 16306 16306 1 33553 0 LQGSGVTVNALHPGVAR SKLAIVLFTKELSRRLQGSGVTVNALHPGV GSGVTVNALHPGVARTELGRHTGIHGSTFS R L Q A R T 2 1 1 0 0 1 0 3 1 0 2 0 0 0 1 1 1 0 0 3 0 0 17 0 1674.9166 Q8NBN7 Q8NBN7 218 234 RDH13 Retinol dehydrogenase 13 yes yes 3 0.0048599 94.45 By MS/MS 8 0 1 1 870140 870140 0 9330 1943 9651 23158 16307 16307 1 57403 0 LQGTRVDDAK MAVKDLEIKIPVVVRLQGTRVDDAKALIAD PVVVRLQGTRVDDAKALIADSGLKILACDD R L Q A K A 1 1 0 2 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 10 1 1101.5778 Q9P2R7 Q9P2R7 408 417 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.034411 108.57 By MS/MS 7 0 1 1 4755900 4755900 0 9331 2741 9652 23159 16308 16308 1 84990 0 LQHALEDQIYR PAHPDKPKKHSPKRRLQHALEDQIYRIFRK PKRRLQHALEDQIYRIFRKSRVLTNQSINC R L Q Y R I 1 1 0 1 0 2 1 0 1 1 2 0 0 0 0 0 0 0 1 0 0 0 11 0 1384.7099 Q8ND04 Q8ND04 300 310 SMG8 Protein SMG8 yes yes 3 0.00040528 133.42 By MS/MS 3.5 0.5 1 1 2 875390 875390 0 9332 1956 9653 23160;23161 16309 16309 1 23767 0 LQIDEQLR HLSYLQEVEQLRLERLQIDEQLRQIGLGFR EQLRLERLQIDEQLRQIGLGFRPPGSGRGS R L Q L R Q 0 1 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1013.5506 P51116;Q06787;P51114 P51116 379 386 FXR2;FMR1;FXR1 Fragile X mental retardation syndrome-related protein 2;Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 1 no no 2 0.011393 117.89 By MS/MS By matching 5 0 2 1 1 2762500 2708200 54345 9333 958;957 9654 23162;23163 16310 16310 1 111320 160810 LQIEDFEAR YGHWSIMKWNRERRRLQIEDFEARIALLPL NRERRRLQIEDFEARIALLPLLQAETDRRT R L Q A R I 1 1 0 1 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1119.556 Q9P0J0 Q9P0J0 60 68 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2 0.0033716 132.88 By MS/MS 10 0 1 1 14951000 14951000 0 9334 2726 9655 23164 16311 16311 1 15892000 0 LQIQCVVEDDK WGASKLVPVGYGIRKLQIQCVVEDDKVGTD GIRKLQIQCVVEDDKVGTDLLEEEITKFEE K L Q D K V 0 0 0 2 1 2 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1345.6548 P24534;P29692 P29692 243 253 EEF1B2;EEF1D Elongation factor 1-beta;Elongation factor 1-delta no no 2 0.00096818 151.15 By MS/MS 8 0 1 1 1236800 1236800 0 9335 726;677 9656 23165 16312 16312 1 81589 0 LQIQGQTNDAK TAECGTFPIDLTKTRLQIQGQTNDAKFKEI TKTRLQIQGQTNDAKFKEIRYRGMLHALVR R L Q A K F 1 0 1 1 0 3 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 11 0 1214.6255 Q5SVS4 Q5SVS4 33 43 SLC25A30 Kidney mitochondrial carrier protein 1 yes yes 2 9.1767E-07 179.42 By MS/MS 8 0 1 1 4350000 4350000 0 9336 1620 9657 23166 16313 16313 1 286970 0 LQIQVDEK GTGLVGAPACGDVMKLQIQVDEKGKIVDAR ACGDVMKLQIQVDEKGKIVDARFKTFGCGS K L Q E K G 0 0 0 1 0 2 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 971.52876 Q9H1K1 Q9H1K1 75 82 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes yes 2 0.0025878 153.04 By MS/MS 9.5 0.5 1 1 2 2086500 2086500 0 9337 2467 9658 23167;23168 16314 16314 1 1361400 0 LQIWDTAGQESFR EFGARMITIDGKQIKLQIWDTAGQESFRSI IKLQIWDTAGQESFRSITRSYYRGAAGALL K L Q F R S 1 1 0 1 0 2 1 1 0 1 1 0 0 1 0 1 1 1 0 0 0 0 13 0 1549.7525 P61019;Q8WUD1 P61019 57 69 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 2 0.00017729 150.49 By MS/MS 9 0 1 1 643550 643550 0 9338 1083 9659 23169 16315 16315 1 369340 0 LQIYYQELEK IKDQIEVMKGNVKSRLQIYYQELEKFKARW NVKSRLQIYYQELEKFKARWDQLKPGDDVI R L Q E K F 0 0 0 0 0 2 2 0 0 1 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1325.6867 Q8NCM8 Q8NCM8 1044 1053 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.030034 85.377 By MS/MS 2 0.816 1 1 1 3 555250 555250 0 9339 1954 9660 23170;23171;23172 16316 16316 1 20289 0 LQKEEEIEFLYNENTVR PWYNAYRFLIQNVLRLQKEEEIEFLYNENT KEEEIEFLYNENTVRESPNITDRWILSFMQ R L Q V R E 0 1 2 0 0 1 5 0 0 1 2 1 0 1 0 0 1 0 1 1 0 0 17 1 2153.0641 P41252 P41252 670 686 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.00021786 109.36 By MS/MS 3 0 1 1 1287700 1287700 0 9340 840 9661 23173 16317 16317 1 33617 0 LQKEQEKLQR KPVDTAAREREVEERLQKEQEKLQRQLDEP EVEERLQKEQEKLQRQLDEPKLERRPRERH R L Q Q R Q 0 1 0 0 0 3 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1298.7306 P23588 P23588 380 389 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 0.00032227 146.11 By MS/MS By MS/MS 5.4 0.49 3 2 2 3 789340 191700 597640 9341 672 9662 23174;23175;23176;23177;23178 16318;16319;16320 16318 3 1494.9 1773100 LQLDSPEDAEFIVAK SLSYSRISLADIAQKLQLDSPEDAEFIVAK LQLDSPEDAEFIVAKAIRDGVIEASINHEK K L Q A K A 2 0 0 2 0 1 2 0 0 1 2 1 0 1 1 1 0 0 0 1 0 0 15 0 1673.8512 O43242 O43242 426 440 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 8.3751E-10 182.37 By MS/MS 6.6 1.02 1 1 2 1 5 23240000 23240000 0 9342 187 9663 23179;23180;23181;23182;23183 16321;16322 16321 2 216150 0 LQLLDVK KLVQLIECPIFTYLRLQLLDVKNNPYLIKA CPIFTYLRLQLLDVKNNPYLIKALYGLLML R L Q V K N 0 0 0 1 0 1 0 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 7 0 827.51165 Q08AM6 Q08AM6 682 688 VAC14 Protein VAC14 homolog yes yes 2 0.036721 110.31 By MS/MS 5 0 1 1 928230 928230 0 9343 1294 9664 23184 16323 16323 1 38154 0 LQLLEDDKENR LGLVDIVKGTNSYYKLQLLEDDKENRYWIF SYYKLQLLEDDKENRYWIFRSWGRVGTVIG K L Q N R Y 0 1 1 2 0 1 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 1 1371.6994 P09874 P09874 572 582 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00055281 165.63 By MS/MS 5 0.816 1 1 1 3 3356700 3356700 0 9344 521 9665 23185;23186;23187 16324 16324 1 84424 0 LQLLQVGNR L Q N R 0 1 1 0 0 2 0 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 9 0 1039.6138 REV__Q9H3U1 yes yes 2 0.0097303 118.74 By MS/MS 4 0 1 1 701440 701440 0 + 9345 3043 9666 23188 16325 16325 1 19148 0 LQLLTGEHRPEDEEELEK NFFLPGRMQRQYMERLQLLTGEHRPEDEEE LTGEHRPEDEEELEKELYREARECLTLLSQ R L Q E K E 0 1 0 1 0 1 6 1 1 0 4 1 0 0 1 0 1 0 0 0 0 0 18 1 2164.0648 Q13505 Q13505 300 317 MTX1 Metaxin-1 yes yes 3 0.017917 63.46 By MS/MS 8 0 1 1 1859100 1859100 0 9346 1376 9667 23189 16326 16326 1 122650 0 LQLQDAGPAR IQCVICCPMELAKTRLQLQDAGPARTYKGS LAKTRLQLQDAGPARTYKGSLDCLAQIYGH R L Q A R T 2 1 0 1 0 2 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 10 0 1067.5724 Q8N8R3 Q8N8R3 120 129 SLC25A29 Mitochondrial basic amino acids transporter yes yes 2 0.0040574 110.53 By MS/MS 7.5 0.5 1 1 2 4562700 4562700 0 9347 1934 9668 23190;23191 16327 16327 1 256340 0 LQLQDEEDDSLCR LYKENEENQKSYGERLQLQDEEDDSLCRIC ERLQLQDEEDDSLCRICMDAVIDCVLLECG R L Q C R I 0 1 0 3 1 2 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 13 0 1619.7097 Q969K3 Q969K3 314 326 RNF34 E3 ubiquitin-protein ligase RNF34 yes yes 2 0.00017686 150.51 By MS/MS 7 0 1 1 1052000 1052000 0 9348 2103 9669 23192 16328 16328 1 18799 0 LQLWDIAGQER FALKVLQWSDYEIVRLQLWDIAGQERFTSM EIVRLQLWDIAGQERFTSMTRLYYRDASAC R L Q E R F 1 1 0 1 0 2 1 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 11 0 1327.6884 O14966;P57729 O14966 59 69 RAB29;RAB38 Ras-related protein Rab-7L1;Ras-related protein Rab-38 no no 2 0.00096411 134.13 By MS/MS 8.5 0.5 1 1 2 904180 904180 0 9349 138 9670 23193;23194 16329;16330;16331 16329 3 294510 0 LQLWDTAGQER FFSRLLEIEPGKRIKLQLWDTAGQERFRSI KRIKLQLWDTAGQERFRSITRSYYRNSVGG K L Q E R F 1 1 0 1 0 2 1 1 0 0 2 0 0 0 0 0 1 1 0 0 0 0 11 0 1315.6521 P20340;Q14964;Q9NRW1 Q14964 64 74 RAB6A;RAB39A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-39A;Ras-related protein Rab-6B no no 2 2.2504E-16 227.27 By MS/MS 8.57 0.904 1 2 3 1 7 14178000 14178000 0 9350 1451;641;2611 9671 23195;23196;23197;23198;23199;23200;23201 16332;16333;16334;16335;16336 16334 5 7476500 0 LQMEAPHIIVGTPGR HACIGGTNVRAEVQKLQMEAPHIIVGTPGR LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI K L Q G R V 1 1 0 0 0 1 1 2 1 2 1 0 1 0 2 0 1 0 0 1 0 0 15 0 1617.8661 P60842 P60842 147 161 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 2.4889E-07 173.06 By MS/MS 5.12 2.37 3 3 3 3 4 6 4 4 2 32 1983000000 1983000000 0 9351 1074 9672;9673 23202;23203;23204;23205;23206;23207;23208;23209;23210;23211;23212;23213;23214;23215;23216;23217;23218;23219;23220;23221;23222;23223;23224;23225;23226;23227;23228;23229;23230;23231;23232;23233 16337;16338;16339;16340;16341;16342;16343;16344;16345;16346;16347;16348;16349;16350;16351;16352;16353;16354;16355;16356;16357;16358;16359;16360;16361;16362 16347 840 26 22252000 0 LQMEQQQQLQQR SFMILVLPVVFETEKLQMEQQQQLQQRQIL TEKLQMEQQQQLQQRQILLGPNTGLSGGMP K L Q Q R Q 0 1 0 0 0 7 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 12 0 1556.7729 Q9NS69 Q9NS69 106 117 TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes yes 2;3 9.8057E-44 320.02 By MS/MS By matching 9 0 4 3 1 1269800 1256900 12948 9352 2620 9674;9675 23234;23235;23236;23237 16363;16364;16365 16365 1548 3 721330 139540 LQMILNEIQPR EGLIPMDTDSESASRLQMILNEIQPRDTND SASRLQMILNEIQPRDTNDYFNQAKILKEH R L Q P R D 0 1 1 0 0 2 1 0 0 2 2 0 1 0 1 0 0 0 0 0 0 0 11 0 1353.7439 Q6YHU6 Q6YHU6 988 998 THADA Thyroid adenoma-associated protein yes yes 2 0.041632 73.841 By MS/MS 2.5 0.5 1 1 2 377430 377430 0 9353 1737 9676 23238;23239 16366 16366 1 14132 0 LQMPFQSGEFK DKRTQQMRMQRLKAKLQMPFQSGEFKALTR LKAKLQMPFQSGEFKALTRRLQVEPRLLSK K L Q F K A 0 0 0 0 0 2 1 1 0 0 1 1 1 2 1 1 0 0 0 0 0 0 11 0 1310.6329 O00411 O00411 144 154 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.010358 98.04 By MS/MS 3.5 0.5 1 1 2 530210 530210 0 9354 92 9677 23240;23241 16367 16367 1 13936 0 LQNFSYDQR TKKGMLEKIDMIRKRLQNFSYDQREMILNP DMIRKRLQNFSYDQREMILNPEGDVNSAKV R L Q Q R E 0 1 1 1 0 2 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 9 0 1169.5465 Q9NTZ6 Q9NTZ6 521 529 RBM12 RNA-binding protein 12 yes yes 2 0.011449 101.65 By MS/MS 4 0 1 1 583510 583510 0 9355 2634 9678 23242 16368 16368 1 15929 0 LQNLFVDDSGR LLFTLAENCIDQVMKLQNLFVDDSGRYLAI QVMKLQNLFVDDSGRYLAIQFHLECAYVFL K L Q G R Y 0 1 1 2 0 1 0 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1262.6255 Q6P3X3 Q6P3X3 217 227 TTC27 Tetratricopeptide repeat protein 27 yes yes 2 0.0039524 112.13 By MS/MS 4.5 0.5 1 1 2 682830 682830 0 9356 1708 9679 23243;23244 16369 16369 1 26381 0 LQNLQLQPGNAK QGKLKITGNMGLAMKLQNLQLQPGNAKL__ AMKLQNLQLQPGNAKL______________ K L Q A K L 1 0 2 0 0 3 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 0 12 0 1322.7306 P22307 P22307 535 546 SCP2 Non-specific lipid-transfer protein yes yes 2 8.2665E-05 158.87 By MS/MS 10 0 1 1 231340 231340 0 9357 657 9680 23245 16370 16370 1 245890 0 LQNNNVYTIAK QIKECHLNADTVSSKLQNNNVYTIAKRNVE VSSKLQNNNVYTIAKRNVEGQDMLYQSLKL K L Q A K R 1 0 3 0 0 1 0 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 11 0 1276.6776 P63010 P63010 868 878 AP2B1 AP-2 complex subunit beta yes yes 2 0.00011647 159.34 By MS/MS 4 0 1 1 1314400 1314400 0 9358 1167 9681 23246 16371 16371 1 35881 0 LQNQQNGQR IGVTCVFPIDLAKTRLQNQQNGQRVYTSMS DLAKTRLQNQQNGQRVYTSMSDCLIKTVRS R L Q Q R V 0 1 2 0 0 4 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1084.5374 Q9H936 Q9H936 36 44 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 3.5767E-11 215.09 By MS/MS 8.5 0.5 1 1 2 442830 442830 0 9359 2528 9682 23247;23248 16372 16372 1 34193 0 LQNSYQPTNK AKAEITRLIKEELIRLQNSYQPTNKGRYKV EELIRLQNSYQPTNKGRYKVL_________ R L Q N K G 0 0 2 0 0 2 0 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 10 0 1191.5884 Q7L014 Q7L014 1016 1025 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 2 0.00098595 143.7 By MS/MS 2.5 0.5 1 1 2 439690 439690 0 9360 1759 9683 23249;23250 16373 16373 1 12672 0 LQPFATEADVEEALR LEAIVRIAEALSKMKLQPFATEADVEEALR LQPFATEADVEEALRLFQVSTLDAALSGTL K L Q L R L 3 1 0 1 0 1 3 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 15 0 1687.8417 P33992 P33992 628 642 MCM5 DNA replication licensing factor MCM5 yes yes 2 4.8096E-10 190.34 By MS/MS 5 0.816 1 1 1 3 2400800 2400800 0 9361 774 9684 23251;23252;23253 16374;16375 16374 2 63739 0 LQPLSPVPSDIEISR LREQQHRRWRLHCLKLQPLSPVPSDIEISR LQPLSPVPSDIEISRGQTPKAVDVLAKEIG K L Q S R G 0 1 0 1 0 1 1 0 0 2 2 0 0 0 3 3 0 0 0 1 0 0 15 0 1649.8988 Q6UB35 Q6UB35 353 367 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 1.0518E-05 147.73 By MS/MS By MS/MS 4.43 1.59 1 1 2 1 1 1 6 1 24306000 23907000 398900 9362 1726 9685 23254;23255;23256;23257;23258;23259;23260 16376;16377;16378 16377 3 648610 833530 LQPSSSPENSLDPFPPR RFQLEELRKFGAQFKLQPSSSPENSLDPFP PSSSPENSLDPFPPRILKEEPKGKEKEVDG K L Q P R I 0 1 1 1 0 1 1 0 0 0 2 0 0 1 5 4 0 0 0 0 0 0 17 0 1866.9112 Q8WWM7 Q8WWM7 554 570 ATXN2L Ataxin-2-like protein yes yes 2 0.0082685 96.135 By MS/MS 3.5 0.5 1 1 2 1056700 1056700 0 9363 2041 9686 23261;23262 16379 16379 1 27897 0 LQPSVSEQELLR ALMLTMEDLLQAAARLQPSVSEQELLRYKR AARLQPSVSEQELLRYKRIQRKFAAC____ R L Q L R Y 0 1 0 0 0 2 2 0 0 0 3 0 0 0 1 2 0 0 0 1 0 0 12 0 1397.7514 Q13608 Q13608 958 969 PEX6 Peroxisome assembly factor 2 yes yes 2 0.0057326 102.52 By MS/MS 4.5 0.5 1 1 2 835750 835750 0 9364 1386 9687 23263;23264 16380 16380 1 25155 0 LQQELEFLEVQEEYIKDEQK PEPEDLEDLYSRYKKLQQELEFLEVQEEYI EFLEVQEEYIKDEQKNLKKEFLHAQEEVKR K L Q Q K N 0 0 0 1 0 4 6 0 0 1 3 2 0 1 0 0 0 0 1 1 0 0 20 1 2537.2537 P43686 P43686 47 66 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.00017997 113.81 By MS/MS 6 0 1 1 5666200 5666200 0 9365 867 9688 23265 16381 16381 1 44186 0 LQQEVEEQLK ELMPLSEDFVWMRARLQQEVEEQLKKKCFT WMRARLQQEVEEQLKKKCFTLLCYYDPNSD R L Q L K K 0 0 0 0 0 3 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1242.6456 Q9H6D7 Q9H6D7 164 173 HAUS4 HAUS augmin-like complex subunit 4 yes yes 2 0.012163 97.813 By MS/MS 7 0 1 1 809110 809110 0 9366 2508 9689 23266 16382 16382 1 14459 0 LQQFFNER HNSFEQFCINYCNEKLQQFFNERILKEEQE INYCNEKLQQFFNERILKEEQELYQKEGLG K L Q E R I 0 1 1 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1080.5352 Q9UM54 Q9UM54 480 487 MYO6 Unconventional myosin-VI yes yes 2 0.0050946 136.75 By MS/MS 3 0 1 1 1350900 1350900 0 9367 2833 9690 23267 16383 16383 1 35266 0 LQQFLEFKE EHLNAVQASAEHQKRLQQFLEFKE______ AEHQKRLQQFLEFKE_______________ R L Q K E - 0 0 0 0 0 2 2 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 9 1 1180.6128 Q9BTX1 Q9BTX1 666 674 NDC1 Nucleoporin NDC1 yes yes 2 0.00097366 181.55 By MS/MS 1.5 0.5 1 1 2 201970 201970 0 9368 2355 9691 23268;23269 16384 16384 1 9905.3 0 LQQLKDETGELSSADEKR HNQIRNMDSMPELQKLQQLKDETGELSSAD LKDETGELSSADEKRYRALKRTAERELLMN K L Q K R Y 1 1 0 2 0 2 3 1 0 0 3 2 0 0 0 2 1 0 0 0 0 0 18 2 2046.0229 Q92900 Q92900 588 605 UPF1 Regulator of nonsense transcripts 1 yes yes 3 0.0044449 92.671 By MS/MS 3 0 1 1 1550900 1550900 0 9369 2088 9692 23270 16385 16385 1 40485 0 LQQLPADFGR CGLTHLVKLDLSKNKLQQLPADFGRLVNLQ LSKNKLQQLPADFGRLVNLQHLDLLNNKLV K L Q G R L 1 1 0 1 0 2 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 10 0 1143.6037 Q96AG4 Q96AG4 74 83 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.010439 99.013 By MS/MS By matching 8 0 2 1 1 8943300 8854900 88411 9370 2121 9693 23271;23272 16386 16386 1 584150 754260 LQQQAALSPTTAPAVSSVSK AFVKALQQEQEIEQRLQQQAALSPTTAPAV ALSPTTAPAVSSVSKQETIMRHHTLRQAPQ R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 0 20 0 1983.0637 Q8WXI9 Q8WXI9 479 498 GATAD2B Transcriptional repressor p66-beta yes yes 2 5.0494E-08 148.33 By MS/MS 5 0 1 1 1490000 1490000 0 9371 2047 9694 23273 16387 16387 1 61244 0 LQQQELR VKEVEKLQEKREKRRLQQQELREKRAQDVD QEKREKRRLQQQELREKRAQDVDATNPNYE R L Q L R E 0 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 913.49813 O00139 O00139 175 181 KIF2A Kinesin-like protein KIF2A yes yes 2 0.020207 125.81 By MS/MS 4.5 0.5 1 1 2 538230 538230 0 9372 69 9695 23274;23275 16388 16388 1 15489 0 LQQQLTQAQETLK QGHLKRASNESTRQRLQQQLTQAQETLKSL QRLQQQLTQAQETLKSLGALKK________ R L Q L K S 1 0 0 0 0 5 1 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 13 0 1527.8257 Q9Y4P3 Q9Y4P3 428 440 TBL2 Transducin beta-like protein 2 yes yes 2 1.3391E-72 312.69 By MS/MS 8.5 1.5 1 1 2 9396000 9396000 0 9373 2957 9696 23276;23277 16389;16390 16389 2 303550 0 LQQQQRPEDAEDGAEGGGK ______________________________ QRPEDAEDGAEGGGKRGEAGWEGGYPEIVK R L Q G K R 2 1 0 2 0 4 3 4 0 0 1 1 0 0 1 0 0 0 0 0 0 0 19 1 2011.9195 Q08J23 Q08J23 10 28 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3 0.007769 71.592 By MS/MS 4.5 0.5 1 1 2 894080 894080 0 9374 1295 9697 23278;23279 16391 16391 1 26991 0 LQQSSYHK QWEMKTEEADLLQTKLQQSSYHKQQEELDA ADLLQTKLQQSSYHKQQEELDALKKTIEES K L Q H K Q 0 0 0 0 0 2 0 0 1 0 1 1 0 0 0 2 0 0 1 0 0 0 8 0 989.49304 O95347 O95347 733 740 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0104 119.17 By MS/MS 3 0 1 1 327100 327100 0 9375 385 9698 23280 16392 16392 1 8539.1 0 LQQTEAELR PVKVPLEVQEADEAKLQQTEAELRKVDEAI EADEAKLQQTEAELRKVDEAIALFQKML__ K L Q L R K 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1086.5669 P26640 P26640 1243 1251 VARS Valine--tRNA ligase yes yes 2 0.0030044 173.39 By MS/MS 3 0 1 1 0 0 0 9376 699 9699 23281 16393 16393 1 0 0 LQQTYAALNSK NQRRYRQRRKAELVKLQQTYAALNSKATFY ELVKLQQTYAALNSKATFYGEQVDYYKSYI K L Q S K A 2 0 1 0 0 2 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 0 11 0 1235.651 P46940 P46940 1506 1516 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.01765 91.469 By MS/MS 2.5 1.12 1 1 1 1 4 1113700 1113700 0 9377 892 9700 23282;23283;23284;23285 16394 16394 1 34069 0 LQQVDPVLLK PVGVGEQLSEGDYARLQQVDPVLLKDEPQQ GDYARLQQVDPVLLKDEPQQTAAQMGFAPI R L Q L K D 0 0 0 1 0 2 0 0 0 0 3 1 0 0 1 0 0 0 0 2 0 0 10 0 1151.6914 O75179 O75179 929 938 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.018221 93.598 By MS/MS 1 0 1 1 79652 79652 0 9378 290 9701 23286 16395 16395 1 3891.7 0 LQQVLTGLR SLALGALPGFLLKGRLQQVLTGLRAVTHTS FLLKGRLQQVLTGLRAVTHTSPEDVSFAES R L Q L R A 0 1 0 0 0 2 0 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1026.6186 Q9BTW9 Q9BTW9 791 799 TBCD Tubulin-specific chaperone D yes yes 2 4.5371E-06 179.37 By MS/MS 4 0.816 1 1 1 3 2746000 2746000 0 9379 2354 9702 23287;23288;23289 16396 16396 1 77506 0 LQSAGSAMPTSSSFK KHTRLRTSPALKTTRLQSAGSAMPTSSSFK LQSAGSAMPTSSSFKHRIKEQEDYIRDWTA R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 Q5SW79 Q5SW79 1268 1282 CEP170 Centrosomal protein of 170 kDa yes yes 2 1.1441E-05 141.34 By MS/MS 2 0 1 1 213660 213660 0 9380 1621 9703 23290 16397 16397 1198 1 10620 0 LQSAMTEGGVVLR YQPTPWEAASDSMKRLQSAMTEGGVVLREP KRLQSAMTEGGVVLREPQRIYE________ R L Q L R E 1 1 0 0 0 1 1 2 0 0 2 0 1 0 0 1 1 0 0 2 0 0 13 0 1359.718 Q9H0U6 Q9H0U6 161 173 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 1.4238E-05 169.21 By MS/MS 9 0 1 1 487060 487060 0 9381 2460 9704 23291 16398 16398 1505 1 279530 0 LQSDDILPLGK NHYPVESSWIAPELRLQSDDILPLGKDSGP PELRLQSDDILPLGKDSGPLSDPITGKPYV R L Q G K D 0 0 0 2 0 1 0 1 0 1 3 1 0 0 1 1 0 0 0 0 0 0 11 0 1197.6605 Q7L2E3 Q7L2E3 378 388 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00033585 155.26 By MS/MS By MS/MS 3.67 0.471 1 2 1 2 0 0 0 9382 1763 9705 23292;23293;23294 16399;16400;16401 16401 3 0 0 LQSEGGSGLDSSPFLSEANAER GVLAEMAKKSMPGGRLQSEGGSGLDSSPFL GLDSSPFLSEANAERIVQTLCTVRGAALKV R L Q E R I 2 1 1 1 0 1 3 3 0 0 3 0 0 1 1 5 0 0 0 0 0 0 22 0 2250.04 Q96D53 Q96D53 120 141 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 1.7939E-51 255.23 By MS/MS 7 0.816 1 1 1 3 6548300 6548300 0 9383 2147 9706 23295;23296;23297 16402 16402 1 74512 0 LQSGICHLFR RVIDLRTSTSQAVFRLQSGICHLFRETLIN QAVFRLQSGICHLFRETLINKGFVEIQTPK R L Q F R E 0 1 0 0 1 1 0 1 1 1 2 0 0 1 0 1 0 0 0 0 0 0 10 0 1229.6339 P14868 P14868 198 207 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.037962 81.771 By MS/MS 6 0 1 1 3547200 3547200 0 9384 594 9707 23298 16403 16403 1 27661 0 LQSIGTENTEENR GILAADESTGSIAKRLQSIGTENTEENRRF KRLQSIGTENTEENRRFYRQLLLTADDRVN R L Q N R R 0 1 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 13 0 1489.7009 P04075 P04075 44 56 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.00029377 164.48 By MS/MS 7 0 1 1 555390 555390 0 9385 444 9708 23299 16404 16404 1 9924.9 0 LQSIGTENTEENRR GILAADESTGSIAKRLQSIGTENTEENRRF RLQSIGTENTEENRRFYRQLLLTADDRVNP R L Q R R F 0 2 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 14 1 1645.802 P04075 P04075 44 57 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.010861 136.48 By MS/MS 7.5 0.5 1 1 2 3220300 3220300 0 9386 444 9709 23300;23301 16405 16405 1 104470 0 LQSQLLSLEK LTNHIRESLPALRSKLQSQLLSLEKEVEEY ALRSKLQSQLLSLEKEVEEYKNFRPDDPTR K L Q E K E 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 2 0 0 0 0 0 0 10 0 1157.6656 P50570 P50570 300 309 DNM2 Dynamin-2 yes yes 2 0.00036922 173.24 By MS/MS 2.5 1.12 1 1 1 1 4 929110 929110 0 9387 949 9710 23302;23303;23304;23305 16406 16406 1 30353 0 LQSQVLQAMR RIEIVVVGTGDRTERLQSQVLQAMRQRGIA DRTERLQSQVLQAMRQRGIAVEVQDTPNAC R L Q M R Q 1 1 0 0 0 3 0 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1172.6336 Q9BU61 Q9BU61 126 135 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 2 4.2544E-11 209.6 By MS/MS 9.5 0.5 1 1 2 3018000 3018000 0 9388 2360 9711 23306;23307 16407 16407 1472 1 3181100 0 LQSSPNPAALLTLR VFSLVRAHYKQVATRLQSSPNPAALLTLRM RLQSSPNPAALLTLRMEFTRILCSHEHYVT R L Q L R M 2 1 1 0 0 1 0 0 0 0 4 0 0 0 2 2 1 0 0 0 0 0 14 0 1479.8409 Q96HP0 Q96HP0 1028 1041 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.013252 89.561 By MS/MS 2 0 1 1 103350 103350 0 9389 2193 9712 23308 16408 16408 1 5137 0 LQSSQEPEAPPPR SPKARRGKARRRAAKLQSSQEPEAPPPRDV AKLQSSQEPEAPPPRDVALLQGRANDLVKY K L Q P R D 1 1 0 0 0 2 2 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1434.7103 Q9UNF1 Q9UNF1 262 274 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.00076184 134.3 By MS/MS 5 0 1 1 889910 889910 0 9390 2840 9713 23309 16409 16409 1 36579 0 LQSSQEPEAPPPRDVALLQGR SPKARRGKARRRAAKLQSSQEPEAPPPRDV PEAPPPRDVALLQGRANDLVKYLLAKDQTK K L Q G R A 2 2 0 1 0 3 2 1 0 0 3 0 0 0 4 2 0 0 0 1 0 0 21 1 2287.1921 Q9UNF1 Q9UNF1 262 282 MAGED2 Melanoma-associated antigen D2 yes yes 3 0.034699 51.942 By MS/MS 5 0 1 1 1843500 1843500 0 9391 2840 9714 23310 16410 16410 1 75777 0 LQSVLGK VSALDLAVLDQVEARLQSVLGKVNEIAKHK VLDQVEARLQSVLGKVNEIAKHKASVEDAD R L Q G K V 0 0 0 0 0 1 0 1 0 0 2 1 0 0 0 1 0 0 0 1 0 0 7 0 743.45414 Q13561 Q13561 283 289 DCTN2 Dynactin subunit 2 yes yes 2 0.010557 152.47 By MS/MS 6.5 0.5 1 1 2 3985300 3985300 0 9392 1382 9715 23311;23312 16411 16411 1 32386 0 LQTFLSK AKKENTAAENGLTVRLQTFLSKRPMPLSAR AENGLTVRLQTFLSKRPMPLSARGNSRLNI R L Q S K R 0 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 7 0 835.48035 Q12789 Q12789 1156 1162 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.02922 115.49 By MS/MS 2 0.816 1 1 1 3 795800 795800 0 9393 1306 9716 23313;23314;23315 16412 16412 1 35516 0 LQTQASATVAIPK KLDAVMKARKDIVARLQTQASATVAIPKEH ARLQTQASATVAIPKEHHRFVIGKNGEKLQ R L Q P K E 3 0 0 0 0 2 0 0 0 1 1 1 0 0 1 1 2 0 0 1 0 0 13 0 1326.7507 Q00341 Q00341 147 159 HDLBP Vigilin yes yes 2 4.3336E-05 160.91 By MS/MS 3 0 1 1 602150 602150 0 9394 1231 9717 23316 16413 16413 1 15719 0 LQTQVFK DYILGLKIEDFLERRLQTQVFKLGLAKSIH IEDFLERRLQTQVFKLGLAKSIHHARVLIR R L Q F K L 0 0 0 0 0 2 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 7 0 862.49125 P46781 P46781 110 116 RPS9 40S ribosomal protein S9 yes yes 2 0.0057015 176.66 By MS/MS By matching 9.33 0.471 2 1 2 1 9065400 8973300 92104 9395 887 9718 23317;23318;23319 16414 16414 1 5183200 992620 LQTSDELLTEPK EIYSYLETLFCQLLKLQTSDELLTEPKQLP LLKLQTSDELLTEPKQLPEKYSLPASPSVI K L Q P K Q 0 0 0 1 0 1 2 0 0 0 3 1 0 0 1 1 2 0 0 0 0 0 12 0 1372.7086 Q6NUQ1 Q6NUQ1 277 288 RINT1 RAD50-interacting protein 1 yes yes 2 2.3626E-16 214.67 By MS/MS 4 0.816 1 1 1 3 4686100 4686100 0 9396 1692 9719 23320;23321;23322 16415 16415 1 185740 0 LQTSSVLVSGLR YSRQLYVLGHEAMKRLQTSSVLVSGLRGLG MKRLQTSSVLVSGLRGLGVEIAKNIILGGV R L Q L R G 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 3 1 0 0 2 0 0 12 0 1258.7245 P22314 P22314 70 81 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 4.7842E-07 181.4 By MS/MS 4.5 0.5 1 1 2 1236600 1236600 0 9397 658 9720 23323;23324 16416 16416 1 37021 0 LQTYKTAVETAVLLLR VDMKELGIWEPLAVKLQTYKTAVETAVLLL QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ K L Q L R I 2 1 0 0 0 1 1 0 0 0 4 1 0 0 0 0 3 0 1 2 0 0 16 1 1818.0615 P49368 P49368 503 518 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.0046275 89.466 By MS/MS 6 0 1 1 839340 839340 0 9398 916 9721 23325 16417 16417 1 6545.2 0 LQVAGEITTGPR SQVIFTNPLEIVKIRLQVAGEITTGPRVSA KIRLQVAGEITTGPRVSALSVVRDLGFFGI R L Q P R V 1 1 0 0 0 1 1 2 0 1 1 0 0 0 1 0 2 0 0 1 0 0 12 0 1240.6776 Q9UJS0;O75746 Q9UJS0 456 467 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 8.0278E-08 193.22 By MS/MS 6 2.58 1 1 1 1 1 1 6 40077000 40077000 0 9399 2798;327 9722 23326;23327;23328;23329;23330;23331 16418;16419;16420;16421 16419 4 1620700 0 LQVEEVHQLSR DQASITARNHIQLVKLQVEEVHQLSRKAET QLVKLQVEEVHQLSRKAETKLAEAQIEELR K L Q S R K 0 1 0 0 0 2 2 0 1 0 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1336.7099 Q9NR28 Q9NR28 192 202 DIABLO Diablo homolog, mitochondrial yes yes 2 0.0086956 99.539 By MS/MS 9 0 1 1 520580 520580 0 9400 2598 9723 23332 16422 16422 1 298760 0 LQVELDNVTGLLSQSDSK EGERVRTELADKVTKLQVELDNVTGLLSQS ELDNVTGLLSQSDSKSSKLTKDFSALESQL K L Q S K S 0 0 1 2 0 2 1 1 0 0 4 1 0 0 0 3 1 0 0 2 0 0 18 0 1945.0004 P35579 P35579 1278 1295 MYH9 Myosin-9 yes yes 2 2.05E-33 235.93 By MS/MS 2 0 1 1 396060 396060 0 9401 793 9724 23333 16423;16424 16423 2 19686 0 LQVEPAVDTSGVQCYGPGIEGQGVFR TIKYGGQPVPNFPSKLQVEPAVDTSGVQCY VQCYGPGIEGQGVFREATTEFSVDARALTQ K L Q F R E 1 1 0 1 1 3 2 5 0 1 1 0 0 1 2 1 1 0 1 4 0 0 26 0 2762.3334 P21333 P21333 1247 1272 FLNA Filamin-A yes yes 3 0.00056951 73.435 By MS/MS 2 0 1 1 157780 157780 0 9402 648 9725 23334 16425;16426 16425 2 7842.4 0 LQVEQEENR ESSQYLTRITIAPQKLQVEQEENRFSFRHS TIAPQKLQVEQEENRFSFRHSTSVSSLAER K L Q N R F 0 1 1 0 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1143.552 Q9H1A4 Q9H1A4 906 914 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0097301 120.31 By MS/MS 1 0 1 1 236780 236780 0 9403 2463 9726 23335 16427 16427 1 11569 0 LQVLHPFDPEQR DACVYLHGEVCEICRLQVLHPFDPEQRKAH ICRLQVLHPFDPEQRKAHEKICMLTFEHEM R L Q Q R K 0 1 0 1 0 2 1 0 1 0 2 0 0 1 2 0 0 0 0 1 0 0 12 0 1477.7678 Q9H000 Q9H000 198 209 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 3 0.035039 89.805 By MS/MS 6.5 0.5 1 1 2 2040700 2040700 0 9404 2446 9727 23336;23337 16428 16428 1 32935 0 LQVLLLAR GTPGGGLPQLALKLRLQVLLLARVLRGHPP QLALKLRLQVLLLARVLRGHPPLLLDVVRN R L Q A R V 1 1 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 8 0 924.61204 O96011 O96011 192 199 PEX11B Peroxisomal membrane protein 11B yes yes 2 0.0041502 154.35 By MS/MS 9 0 1 1 96454 96454 0 9405 421 9728 23338 16429 16429 1 55356 0 LQVLQEGVLCR YAAGAFRWLEPSERRLQVLQEGVLCRTLAG SERRLQVLQEGVLCRTLAGCWPLRLLATPG R L Q C R T 0 1 0 0 1 2 1 1 0 0 3 0 0 0 0 0 0 0 0 2 0 0 11 0 1313.7126 Q9Y3P4 Q9Y3P4 193 203 RHBDD3 Rhomboid domain-containing protein 3 yes yes 2 0.0019728 120.63 By MS/MS 6.5 0.5 1 1 2 1700000 1700000 0 9406 2941 9729 23339;23340 16430 16430 1 25234 0 LQVSEQSQR RDVRSCHYGVIDKFRLQVSEQSQRKALGRK VIDKFRLQVSEQSQRKALGRKEVVATLLPS R L Q Q R K 0 1 0 0 0 3 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1073.5465 Q9UJG1 Q9UJG1 97 105 MOSPD1 Motile sperm domain-containing protein 1 yes yes 2 0.0001537 167.12 By MS/MS 9 0 1 1 529370 529370 0 9407 2796 9730 23341 16431 16431 1 303810 0 LQVTEHLPEK RKALHELKLEEWKGRLQVTEHLPEKIESSL EWKGRLQVTEHLPEKIESSLQEDEPENDAK R L Q E K I 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 0 1 0 0 1 0 0 10 0 1192.6452 Q9NPL8 Q9NPL8 240 249 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2;3 0.0027344 121.36 By MS/MS 7.5 0.5 2 2 4 7211700 7211700 0 9408 2583 9731 23342;23343;23344;23345 16432;16433 16433 2 425990 0 LQVTNVLSQPLTQATVK PEGSASDTHEQAILRLQVTNVLSQPLTQAT VTNVLSQPLTQATVKLEHAKSVASRATVLQ R L Q V K L 1 0 1 0 0 3 0 0 0 0 3 1 0 0 1 1 3 0 0 3 0 0 17 0 1839.0466 P04844 P04844 290 306 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 1.9717E-98 340.92 By MS/MS 3.2 1.72 1 1 1 1 1 5 4744500 4744500 0 9409 459 9732 23346;23347;23348;23349;23350 16434;16435;16436 16436 3 57714 0 LQVVDQPLPVR FHSPNPEIPALLDGRLQVVDQPLPVRGGNV LDGRLQVVDQPLPVRGGNVGINSFGFGGSN R L Q V R G 0 1 0 1 0 2 0 0 0 0 2 0 0 0 2 0 0 0 0 3 0 0 11 0 1262.7347 P49327 P49327 374 384 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.793E-07 188.91 By MS/MS By MS/MS 3.5 1.8 1 2 1 2 1 1 6 2 63934000 63766000 167290 9410 915 9733 23351;23352;23353;23354;23355;23356;23357;23358 16437;16438;16439;16440;16441;16442;16443;16444;16445;16446 16441 10 2360900 228920 LQWFCDR KKIIETPGIRARSARLQWFCDRCVANNQVE GIRARSARLQWFCDRCVANNQVETLEKLVE R L Q D R C 0 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 7 0 1023.4596 P42704 P42704 923 929 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.017752 132.57 By MS/MS 4.5 1.12 1 1 1 1 4 29159000 29159000 0 9411 854 9734 23359;23360;23361;23362 16447;16448 16448 2 761340 0 LQYEGIFIK VKIHEATGMPAGKQKLQYEGIFIKDSNSLA PAGKQKLQYEGIFIKDSNSLAYYNMANGAV K L Q I K D 0 0 0 0 0 1 1 1 0 2 1 1 0 1 0 0 0 0 1 0 0 0 9 0 1109.6121 Q15459 Q15459 757 765 SF3A1 Splicing factor 3A subunit 1 yes yes 2 0.0077519 109.71 By MS/MS 4 0 1 1 312030 312030 0 9412 1504 9735 23363 16449 16449 1 8518.2 0 LQYLIDLGR GHSFRRQYKPLSLNRLQYLIDLGRVDPSQP PLSLNRLQYLIDLGRVDPSQPIDLTQLVNG R L Q G R V 0 1 0 1 0 1 0 1 0 1 3 0 0 0 0 0 0 0 1 0 0 0 9 0 1089.6182 Q9P015 Q9P015 101 109 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.00050482 153.24 By MS/MS 8.5 0.5 1 1 2 1804500 1804500 0 9413 2721 9736 23364;23365 16450 16450 1 133280 0 LQYYVPR LRHLQVIFGHLAASRLQYYVPRGFWKQFRL FGHLAASRLQYYVPRGFWKQFRLWGEPVNL R L Q P R G 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 2 1 0 0 7 0 937.50215 Q93008 Q93008 1659 1665 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.015553 138.62 By MS/MS 2.5 1.12 1 1 1 1 4 3701200 3701200 0 9414 2096 9737 23366;23367;23368;23369 16451;16452;16453 16451 3 163200 0 LRAEIDNVKK NTKHEISEMNRMIQRLRAEIDNVKKQCANL RMIQRLRAEIDNVKKQCANLQNAIADAEQR R L R K K Q 1 1 1 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1184.6877 CON__P13647;P13647 CON__P13647 396 405 KRT5 Keratin, type II cytoskeletal 5 yes no 3 0.0033714 90.827 By MS/MS 4 2 1 1 1 1 1 1 1 7 376360 0 376360 + 9415 50 9738 23370;23371;23372;23373;23374;23375;23376 16454;16455;16456;16457;16458;16459 16454 6 0 729200 LRAEPDHMVLGK RKVTLSTDKNKYGIRLRAEPDHMVLGKRLK GIRLRAEPDHMVLGKRLKGAFKAVMTSIKQ R L R G K R 1 1 0 1 0 0 1 1 1 0 2 1 1 0 1 0 0 0 0 1 0 0 12 1 1364.7235 P41252 P41252 892 903 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.0059743 128.36 By MS/MS 3 0 1 1 644920 644920 0 9416 840 9739 23377 16460 16460 1 16836 0 LRAFHNEAQVNPER LAVNAAQDSTDLVAKLRAFHNEAQVNPERK KLRAFHNEAQVNPERKNLKWIGLDLSNGKP K L R E R K 2 2 2 0 0 1 2 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 14 1 1679.8492 P17987 P17987 467 480 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 3.4894E-08 226.42 By MS/MS 5 2.35 1 2 1 4 29883000 29883000 0 9417 619 9740 23378;23379;23380;23381 16461;16462;16463 16463 3 256560 0 LRDFLLEHR DFSSRAREVISHIGKLRDFLLEHRKDYINA ISHIGKLRDFLLEHRKDYINAYSHTMSEYG K L R H R K 0 2 0 1 0 0 1 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 9 1 1197.6618 Q9P2W9 Q9P2W9 63 71 STX18 Syntaxin-18 yes yes 3 0.01108 82.029 By MS/MS 7 0 1 1 1040200 1040200 0 9418 2742 9741 23382 16464 16464 1 18588 0 LRDPAQQVR FPNLVDPWTPHLYARLRDPAQQVRKTAGLV PHLYARLRDPAQQVRKTAGLVMTHLILKDM R L R V R K 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 9 1 1081.5992 Q15021 Q15021 1101 1109 NCAPD2 Condensin complex subunit 1 yes yes 3 0.052615 60.518 By MS/MS 3 0 1 1 404090 404090 0 9419 1464 9742 23383 16465 16465 1 10549 0 LRDQLGTAK YDERIDRVETRITARLRDQLGTAKNANEMF TRITARLRDQLGTAKNANEMFRIFSRFNAL R L R A K N 1 1 0 1 0 1 0 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 1 1000.5665 Q14204 Q14204 568 576 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0012528 166.09 By MS/MS By matching 1.57 0.728 4 2 1 5 2 2660400 2623400 37089 9420 1421 9743 23384;23385;23386;23387;23388;23389;23390 16466;16467;16468;16469 16466 4 126400 37089 LRDVLQQR NLSRELLQESALIRKLRDVLQQRLIKFFID ESALIRKLRDVLQQRLIKFFIDQSKKDAEK K L R Q R L 0 2 0 1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 1 1026.5934 Q12931 Q12931 414 421 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 0.019116 153.04 By MS/MS 5 0 2 2 2795400 2795400 0 9421 1316 9744 23391;23392 16470;16471 16470 2 114900 0 LRECELSPGVNR SVNIKEICWNLQNIRLRECELSPGVNRDLT NIRLRECELSPGVNRDLTRRVRNINGITQH R L R N R D 0 2 1 0 1 0 2 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 12 1 1428.7143 Q9BXP5 Q9BXP5 487 498 SRRT Serrate RNA effector molecule homolog yes yes 2;3 0.0027525 144.55 By MS/MS 3.67 0.471 1 2 3 1710600 1710600 0 9422 2402 9745 23393;23394;23395 16472;16473 16473 2 46496 0 LREDLER DGKYSQVLANGLDNKLREDLERLKKIRAHR LANGLDNKLREDLERLKKIRAHRGLRHFWG K L R E R L 0 2 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 1 929.49304 P62269 P62269 107 113 RPS18 40S ribosomal protein S18 yes yes 3 0.0042738 159.2 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 5721100 5721100 0 9423 1124 9746 23396;23397;23398 16474;16475;16476 16476 3 3283400 0 LREEIEELKR EGAQMNGIQPEEIGRLREEIEELKRNQELL EEIGRLREEIEELKRNQELLQSQLTEKDSM R L R K R N 0 2 0 0 0 0 4 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 10 2 1313.7303 O60763 O60763 735 744 USO1 General vesicular transport factor p115 yes yes 3 0.0013128 110.84 By MS/MS 4 0 1 1 1459300 1459300 0 9424 264 9747 23399 16477 16477 1 39837 0 LREELKPIAFAR HFGYCDEIDLTELVKLREELKPIAFARGIK LVKLREELKPIAFARGIKLSFMPFFLKAAS K L R A R G 2 2 0 0 0 0 2 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 12 2 1441.8405 P11182 P11182 290 301 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 3 0.023405 79.283 By MS/MS 6 0 1 1 5139500 5139500 0 9425 550 9748 23400 16478 16478 1 40078 0 LREENKQFK KVMEECKRLQGEVQRLREENKQFKEEDGLR QGEVQRLREENKQFKEEDGLRMRKTVQSNS R L R F K E 0 1 1 0 0 1 2 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 9 2 1190.6408 O95292 O95292 183 191 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 3 0.015891 85.676 By MS/MS 8 0 1 1 0 0 0 9426 381 9749 23401 16479 16479 1 0 0 LREEQEKVVTNCQER PAPALVPLRAPDVARLREEQEKVVTNCQER LREEQEKVVTNCQERIQHWKKVDNDYNALR R L R E R I 0 2 1 0 1 2 4 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 15 2 1916.9374 O94763 O94763 33 47 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 3 0.010386 81.992 By MS/MS 4.5 0.5 1 1 2 732820 732820 0 9427 347 9750 23402;23403 16480 16480 1 29199 0 LREEVVTK DQSDLDFQEELEVARLREEVVTKIRANQQL EELEVARLREEVVTKIRANQQLEKDLNLMD R L R T K I 0 1 0 0 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 8 1 972.5604 Q13576 Q13576 807 814 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 3 0.017699 96.668 By MS/MS 3 0 1 1 597170 597170 0 9428 1383 9751 23404 16481 16481 1 15589 0 LREIEENQKR EERKKVETEAKIKQKLREIEENQKRIEKLE KIKQKLREIEENQKRIEKLEEYITTSKQSL K L R K R I 0 2 1 0 0 1 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 10 2 1313.7052 Q14683 Q14683 425 434 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.00011467 149.96 By MS/MS 3 0 1 1 1015900 1015900 0 9429 1440 9752 23405 16482 16482 1 26519 0 LRELFGKDEQQR PYVPEPYYPESGWDRLRELFGKDEQQRISK WDRLRELFGKDEQQRISKDLANICKTAATA R L R Q R I 0 2 0 1 0 2 2 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 12 2 1517.795 Q9NPL8 Q9NPL8 58 69 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 3 0.0034915 105.65 By MS/MS 8 0 1 1 2763700 2763700 0 9430 2583 9753 23406 16483 16483 1 182320 0 LRELQLQEVALR YRDENSQLVAIVLRRLRELQLQEVALRQEN LRRLRELQLQEVALRQENKRPSPRKLSSEP R L R L R Q 1 2 0 0 0 2 2 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 12 1 1466.8569 Q9Y4B6 Q9Y4B6 179 190 VPRBP Protein VPRBP yes yes 3 0.051881 60.161 By MS/MS 3 0 1 1 169900 169900 0 9431 2950 9754 23407 16484 16484 1 4435.2 0 LRENKEFLEFR RYEGGYPALTEVMNKLRENKEFLEFRKARS VMNKLRENKEFLEFRKARSDMLLSRKNQLL K L R F R K 0 2 1 0 0 0 3 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 11 2 1479.7834 O75323 O75323 144 154 GBAS Protein NipSnap homolog 2 yes yes 3 0.011591 92.112 By MS/MS 8 0 1 1 10920000 10920000 0 9432 296 9755 23408 16485 16485 1 720400 0 LREQGTESR IVGTTRKLYEKKLLKLREQGTESRSSTPLP EKKLLKLREQGTESRSSTPLPTISSSAENT K L R S R S 0 2 0 0 0 1 2 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 9 1 1074.5418 P42166;P42167 P42167 149 157 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 3.5191E-05 178.55 By MS/MS By matching 6 0.707 1 2 1 3 1 6426700 6391300 35341 9433 846;845 9756 23409;23410;23411;23412 16486;16487;16488 16487 3 68736 108390 LREVVETPLLHPER VTYSDVGGCKEQIEKLREVVETPLLHPERF KLREVVETPLLHPERFVNLGIEPPKGVLLF K L R E R F 0 2 0 0 0 0 3 0 1 0 3 0 0 0 2 0 1 0 0 2 0 0 14 1 1686.9417 P35998 P35998 187 200 PSMC2 26S protease regulatory subunit 7 yes yes 3 0.0018553 110.55 By MS/MS 6.5 0.5 1 1 2 9599500 9599500 0 9434 801 9757 23413;23414 16489;16490 16490 2 118110 0 LRHEILLSQSVR MMLVTSGAVAFGKQRLRHEILLSQSVRQAL KQRLRHEILLSQSVRQALHSGQNQLKEMAI R L R V R Q 0 2 0 0 0 1 1 0 1 1 3 0 0 0 0 2 0 0 0 1 0 0 12 1 1449.8416 P54886 P54886 127 138 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 8.3236E-05 185.99 By MS/MS 5.5 0.5 2 2 4 10395000 10395000 0 9435 1019 9758 23415;23416;23417;23418 16491;16492;16493 16492 3 185300 0 LRLECADLLETR LTAGEHNKACSLLGKLRLECADLLETRGVV LGKLRLECADLLETRGVVLRDPTLFSFLWV K L R T R G 1 2 0 1 1 0 2 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 12 1 1487.7766 Q6PI48 Q6PI48 455 466 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2;3 0.00020216 189.57 By MS/MS 6.2 1.17 2 1 1 1 5 12669000 12669000 0 9436 1715 9759 23419;23420;23421;23422;23423 16494;16495 16494 2 443560 0 LRLESEGSPETLTNLR AEMELRAKEEERLNKLRLESEGSPETLTNL RLESEGSPETLTNLRKGYLFMYNLVQFLGF K L R L R K 0 2 1 0 0 0 3 1 0 0 4 0 0 0 1 2 2 0 0 0 0 0 16 1 1813.9534 Q9P035 Q9P035 131 146 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 3 0.0067263 93.738 By MS/MS 1 0 1 1 427610 427610 0 9437 2723 9760 23424 16496 16496 1 20892 0 LRNEKEQELDTLK PLWYLTKEKKDELCRLRNEKEQELDTLKRK CRLRNEKEQELDTLKRKSPSDLWKEDLATF R L R L K R 0 1 1 1 0 1 3 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 13 2 1614.8577 P11388 P11388 1147 1159 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.01123 86.756 By MS/MS 3 0 1 1 569840 569840 0 9438 553 9761 23425 16497 16497 1 14876 0 LRPESALAQAQK DQVEEAVADFDECIRLRPESALAQAQKCFA CIRLRPESALAQAQKCFALYRQAYTGNNSS R L R Q K C 3 1 0 0 0 2 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 12 1 1310.7306 O94826 O94826 430 441 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2;3 0.010311 128.81 By MS/MS 5 0 2 2 9533400 9533400 0 9439 353 9762 23426;23427 16498;16499 16498 2 391860 0 LRQEAKER REAELQKVRKAEEERLRQEAKEREKERILQ RKAEEERLRQEAKEREKERILQEHEQIKKK R L R E R E 1 2 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1028.5727 Q14152 Q14152 612 619 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0073452 140.09 By MS/MS By matching 3 0 4 2 2 295860 274230 21623 9440 1409 9763 23428;23429;23430;23431 16500;16501 16500 2 7158.9 30990 LRQEEREQEQR NQAENRRLHELRIARLRQEEREQEQRQALE RIARLRQEEREQEQRQALEQARKAEEVQAW R L R Q R Q 0 3 0 0 0 3 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 2 1499.7441 Q9BYN8 Q9BYN8 124 134 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2;3;4 6.0221E-10 225.01 By MS/MS By matching 9.14 0.639 1 4 2 5 2 3906000 3887400 18680 9441 2417 9764 23432;23433;23434;23435;23436;23437;23438 16502;16503;16504 16503 3 2251700 183130 LRSEIDNVKK NSKIEISELNRVIQRLRSEIDNVKKQISNL RVIQRLRSEIDNVKKQISNLQQSISDAEQR R L R K K Q 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1200.6826 P04264;CON__P04264;CON__Q5XQN5 P04264 408 417 KRT1 Keratin, type II cytoskeletal 1 no no 4 0.0013749 112.36 By MS/MS By MS/MS 5.64 2.9 1 1 1 1 2 1 1 2 1 3 8 1908600 854000 1054600 + 9442 450;45;61 9765 23439;23440;23441;23442;23443;23444;23445;23446;23447;23448;23449 16505;16506;16507;16508;16509;16510 16508 6 311210 2169100 LSAALSSLQR VPHEGLGEYNRAVSKLSAALSSLQRDMQRL RAVSKLSAALSSLQRDMQRLTDQQQRLLAP K L S Q R D 2 1 0 0 0 1 0 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1044.5928 Q9P1Y5 Q9P1Y5 706 715 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 9.0683E-05 192.91 By MS/MS 2 0.816 1 1 1 3 1405300 1405300 0 9443 2733 9766 23450;23451;23452 16511 16511 1 55558 0 LSAAVEVGDAAEVK RRYEFKGLHKVWKKKLSAAVEVGDAAEVKR KLSAAVEVGDAAEVKRCKNMEVLYDSLQLA K L S V K R 4 0 0 1 0 0 2 1 0 0 1 1 0 0 0 1 0 0 0 3 0 0 14 0 1357.7089 Q07864 Q07864 779 792 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 9.5202E-06 168.85 By MS/MS 2 0 1 1 215770 215770 0 9444 1283 9767 23453 16512 16512 1 10725 0 LSAAVTEAFVR SSLDWDRACFTMDPKLSAAVTEAFVRLHEE MDPKLSAAVTEAFVRLHEEGIIYRSTRLVN K L S V R L 3 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 2 0 0 11 0 1162.6346 P26640 P26640 451 461 VARS Valine--tRNA ligase yes yes 2 1.982E-11 212.21 By MS/MS 3.5 0.5 1 1 2 4444100 4444100 0 9445 699 9768 23454;23455 16513 16513 1 116630 0 LSAEKVEIATLTR ALAIKVLNKTMDVSKLSAEKVEIATLTREN SKLSAEKVEIATLTRENGKTVIRVLKQKEV K L S T R E 2 1 0 0 0 0 2 0 0 1 2 1 0 0 0 1 2 0 0 1 0 0 13 1 1429.814 P25789 P25789 206 218 PSMA4 Proteasome subunit alpha type-4 yes yes 2;3 0.00034856 159.5 By MS/MS By matching 8.67 0.745 3 2 1 5 1 18832000 18757000 74756 9446 691 9769 23456;23457;23458;23459;23460;23461 16514;16515 16515 2 1393200 637760 LSAETLQQVNR AFAHKDRDVQDETYRLSAETLQQVNRLLAC ETYRLSAETLQQVNRLLACYKGTHNFHNFT R L S N R L 1 1 1 0 0 2 1 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 11 0 1257.6677 Q9Y606 Q9Y606 224 234 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 1.8963E-16 228.2 By MS/MS 8 0.816 1 1 1 3 10288000 10288000 0 9447 2992 9770 23462;23463;23464 16516 16516 1 275530 0 LSAFAFKQE LSKKQKPLDFSTNQKLSAFAFKQE______ FSTNQKLSAFAFKQE_______________ K L S Q E - 2 0 0 0 0 1 1 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 9 1 1039.5338 O75717 O75717 1121 1129 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0052271 148.69 By MS/MS 3.5 0.5 1 1 2 846970 846970 0 9448 325 9771 23465;23466 16517 16517 1 22349 0 LSALLQETK TETIIATKTTDVEGRLSALLQETKELKNEI TDVEGRLSALLQETKELKNEIKALSEERTA R L S T K E 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 9 0 1001.5757 O60763 O60763 850 858 USO1 General vesicular transport factor p115 yes yes 2 0.0050096 131.62 By MS/MS 4 0 1 1 960920 960920 0 9449 264 9772 23467 16518 16518 1 26232 0 LSANQQNILK RGSNSLPLLRSVLDKLSANQQNILKFIACN SVLDKLSANQQNILKFIACNEIFLMPATVF K L S L K F 1 0 2 0 0 2 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1127.6299 P57088 P57088 149 158 TMEM33 Transmembrane protein 33 yes yes 2 1.0817E-06 189.38 By MS/MS 9.5 0.5 1 1 2 20132000 20132000 0 9450 1053 9773 23468;23469 16519 16519 1 11610000 0 LSASTASELSPK SLKKRQSLPASPRARLSASTASELSPKSKA RARLSASTASELSPKSKARPSSPSTSWHRP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 Q3KQU3 Q3KQU3 451 462 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.00052237 138.76 By MS/MS 3.5 0.5 1 1 2 1169600 1169600 0 9451 1567 9774 23470;23471 16520 16520 1 31337 0 LSATESIVEIVK SSTNLINEINGVSEKLSATESIVEIVKQEV SEKLSATESIVEIVKQEVLPLTLELEILEN K L S V K Q 1 0 0 0 0 0 2 0 0 2 1 1 0 0 0 2 1 0 0 2 0 0 12 0 1287.7286 O43432 O43432 366 377 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 3.8358E-11 206.49 By MS/MS 2.5 0.5 1 1 2 434030 434030 0 9452 200 9775 23472;23473 16521 16521 1 17815 0 LSDADLAGPLQK QLLASFLANNPFSCKLSDADLAGPLQKETQ SCKLSDADLAGPLQKETQKLQEMRAQRRTA K L S Q K E 2 0 0 2 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 0 0 0 12 0 1226.6507 Q15021 Q15021 441 452 NCAPD2 Condensin complex subunit 1 yes yes 2 0.0011935 131.12 By MS/MS 3 0 1 1 2143200 2143200 0 9453 1464 9776 23474 16522 16522 1 55948 0 LSDEDLYK ATLTVTNFFKQEGDRLSDEDLYKFLADMRR FKQEGDRLSDEDLYKFLADMRRPSSVLRRL R L S Y K F 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 981.46549 Q96N67 Q96N67 480 487 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.019809 107.01 By MS/MS 2 0 1 1 657740 657740 0 9454 2230 9777 23475 16523 16523 1 32693 0 LSDEGEWLVR AQQMYAATKGLRWYRLSDEGEWLVRELNLP LRWYRLSDEGEWLVRELNLPVDRTEGGWIS R L S V R E 0 1 0 1 0 0 2 1 0 0 2 0 0 0 0 1 0 1 0 1 0 0 10 0 1202.5932 P54098 P54098 997 1006 POLG DNA polymerase subunit gamma-1 yes yes 2 6.6067E-07 187.22 By MS/MS 3 0 1 1 610550 610550 0 9455 1011 9778 23476 16524 16524 1 15938 0 LSDETLIDIMTR DDQVKKIDKYLYAMRLSDETLIDIMTRFRK AMRLSDETLIDIMTRFRKEMKNGLSRDFNP R L S T R F 0 1 0 2 0 0 1 0 0 2 2 0 1 0 0 1 2 0 0 0 0 0 12 0 1405.7123 P19367 P19367 31 42 HK1 Hexokinase-1 yes yes 2 2.208E-11 209.85 By MS/MS 4.5 0.5 1 1 2 825020 825020 0 9456 630 9779 23477;23478 16525;16526 16525 2 23448 0 LSDETLLEISKR HDQVQKVDQYLYHMRLSDETLLEISKRFRK HMRLSDETLLEISKRFRKEMEKGLGATTHP R L S K R F 0 1 0 1 0 0 2 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 12 1 1402.7668 P52789 P52789 31 42 HK2 Hexokinase-2 yes yes 3 0.0065248 96.334 By MS/MS 4 0 1 1 1911300 1911300 0 9457 992 9780 23479 16527 16527 1 52176 0 LSDGFNGADLR PITKHGEIDYEAIVKLSDGFNGADLRNVCT AIVKLSDGFNGADLRNVCTEAGMFAIRADH K L S L R N 1 1 1 2 0 0 0 2 0 0 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1163.5571 P62333 P62333 334 344 PSMC6 26S protease regulatory subunit 10B yes yes 2 3.5894E-22 242.97 By MS/MS By MS/MS 7.4 0.49 3 2 4 1 20804000 20773000 30681 9458 1133 9781 23480;23481;23482;23483;23484 16528;16529 16529 2 459960 125950 LSDGFVAAEAK ALLSVDPGRFQDSWRLSDGFVAAEAKTILP DSWRLSDGFVAAEAKTILPHRARSRPDLMD R L S A K T 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 1 0 0 11 0 1106.5608 Q6R327 Q6R327 364 374 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.0045099 109.79 By MS/MS 2 0 1 1 288490 288490 0 9459 1722 9782 23485 16530 16530 1 14339 0 LSDGIGVMLPQVLK KTLRTLLEEEYFREKLSDGIGVMLPQVLKG KLSDGIGVMLPQVLKGMTSESDSIGLTPGE K L S L K G 0 0 0 1 0 1 0 2 0 1 3 1 1 0 1 1 0 0 0 2 0 0 14 0 1468.8323 P52701 P52701 647 660 MSH6 DNA mismatch repair protein Msh6 yes yes 2 3.5367E-05 154.24 By MS/MS 3 0 1 1 1135600 1135600 0 9460 989 9783 23486 16531 16531 748 1 29645 0 LSDGVAVLK TSEYEKEKLNERLAKLSDGVAVLKVGGTSD NERLAKLSDGVAVLKVGGTSDVEVNEKKDR K L S L K V 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 900.52803 P10809 P10809 397 405 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0006944 148.99 By MS/MS By MS/MS 5.1 2.47 1 1 1 1 1 2 1 1 1 9 1 515740000 514720000 1010700 9461 544 9784 23487;23488;23489;23490;23491;23492;23493;23494;23495;23496 16532;16533;16534;16535;16536;16537;16538 16536 7 5066000 3099700 LSDIGEGIR LKTTAALRGQVVQFKLSDIGEGIREVTVKE QVVQFKLSDIGEGIREVTVKEWYVKEGDTV K L S I R E 0 1 0 1 0 0 1 2 0 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 958.50836 P11182 P11182 69 77 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 2 0.0026774 122.52 By MS/MS By MS/MS 6 0 2 1 1 3090400 2999800 90586 9462 550 9785 23497;23498 16539;16540 16539 2 23393 277820 LSDLAQSDPEVR KYLPELLGNTGLLMKLSDLAQSDPEVRRAA LMKLSDLAQSDPEVRRAAVHCMANLCLSVP K L S V R R 1 1 0 2 0 1 1 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 12 0 1328.6572 Q6AI08 Q6AI08 171 182 HEATR6 HEAT repeat-containing protein 6 yes yes 2 0.0022607 119.74 By MS/MS 3.5 0.5 1 1 2 857280 857280 0 9463 1676 9786 23499;23500 16541 16541 1 22925 0 LSDLDSETR DPEINTKKINPENSKLSDLDSETRSMVEKM NPENSKLSDLDSETRSMVEKMMYDQRQKSM K L S T R S 0 1 0 2 0 0 1 0 0 0 2 0 0 0 0 2 1 0 0 0 0 0 9 0 1034.488 Q9Y266 Q9Y266 276 284 NUDC Nuclear migration protein nudC yes yes 2 0.0069542 111.46 By MS/MS 6.5 0.5 1 1 2 7985200 7985200 0 9464 2871 9787 23501;23502 16542 16542 1 136660 0 LSDLDYMQFIR RWLIKEELEEMLVEKLSDLDYMQFIRLLEK LVEKLSDLDYMQFIRLLEKLLTSQCGAAEE K L S I R L 0 1 0 2 0 1 0 0 0 1 2 0 1 1 0 1 0 0 1 0 0 0 11 0 1399.6806 P82933 P82933 213 223 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.00010762 188.87 By MS/MS 7 0 1 1 320350 320350 0 9465 1211 9788 23503 16543 16543 1 5724.7 0 LSDLLDWK QSRRQRIIQRNRTERLSDLLDWKYLGRYYM QRNRTERLSDLLDWKYLGRYYMSARHMALS R L S W K Y 0 0 0 2 0 0 0 0 0 0 3 1 0 0 0 1 0 1 0 0 0 0 8 0 988.52295 P13807 P13807 592 599 GYS1 Glycogen [starch] synthase, muscle yes yes 2 0.0043405 139.97 By MS/MS 4.5 0.5 1 1 2 415920 415920 0 9466 583 9789 23504;23505 16544 16544 1 16189 0 LSDPGIPITVLSR LAREGIDSECGPFIKLSDPGIPITVLSRQE IKLSDPGIPITVLSRQECIERIPWIAPECV K L S S R Q 0 1 0 1 0 0 0 1 0 2 2 0 0 0 2 2 1 0 0 1 0 0 13 0 1366.782 P23458 P23458 737 749 JAK1 Tyrosine-protein kinase JAK1 yes yes 2 0.036375 76.843 By MS/MS 3.5 0.5 1 1 2 546930 546930 0 9467 669 9790 23506;23507 16545 16545 1 14807 0 LSDVFGSVR IFTDVALKFEHQLIKLSDVFGSVRTHGIAV EHQLIKLSDVFGSVRTHGIAVSPCGAYLAI K L S V R T 0 1 0 1 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 9 0 978.51345 Q9UKN8 Q9UKN8 468 476 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2 0.0066554 112.11 By MS/MS 4.5 0.5 1 1 2 956810 956810 0 9468 2814 9791 23508;23509 16546 16546 1 35422 0 LSDYDSSEEAIR QRNLCLHLKAEALIKLSDYDSSEEAIRTLD LIKLSDYDSSEEAIRTLDQISDADNIPGLL K L S I R T 1 1 0 2 0 0 2 0 0 1 1 0 0 0 0 3 0 0 1 0 0 0 12 0 1383.6154 Q6PGP7 Q6PGP7 363 374 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 8.3197E-24 238.01 By MS/MS 3 0 1 1 1524900 1524900 0 9469 1714 9792 23510 16547 16547 1 39807 0 LSDYLFTLAR QMGETDANVAKFLNRLSDYLFTLARYAAMK KFLNRLSDYLFTLARYAAMKEGNQEKIYMK R L S A R Y 1 1 0 1 0 0 0 0 0 0 3 0 0 1 0 1 1 0 1 0 0 0 10 0 1197.6394 Q96EY8 Q96EY8 216 225 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes yes 2 7.7121E-07 185.81 By MS/MS 9 0 1 1 371250 371250 0 9470 2171 9793 23511 16548 16548 1 213060 0 LSEAMAR SSWRITVRQLESMIRLSEAMARMHCCDEVQ RQLESMIRLSEAMARMHCCDEVQPKHVKEA R L S A R M 2 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 7 0 776.38507 Q14566 Q14566 627 633 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.020731 124.37 By MS/MS 4 0 1 1 529690 529690 0 9471 1436 9794 23512 16549 16549 1 14460 0 LSEAPLESFYR IINMKIKLFMNCRGRLSEAPLESFYRFVLE CRGRLSEAPLESFYRFVLEPELMSGANDVS R L S Y R F 1 1 0 0 0 0 2 0 0 0 2 0 0 1 1 2 0 0 1 0 0 0 11 0 1310.6507 Q9NYU1 Q9NYU1 1006 1016 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 0.00025912 152.54 By MS/MS 3.5 0.5 1 1 2 1036600 1036600 0 9472 2698 9795 23513;23514 16550 16550 1 27255 0 LSEDIDLLK PSMQSAQGLITQVDKLSEDIDLLKSRIESE ITQVDKLSEDIDLLKSRIESEVRRDLHVST K L S L K S 0 0 0 2 0 0 1 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1044.5703 O43264 O43264 66 74 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.00015207 167.23 By MS/MS 4 0 1 1 3449800 3449800 0 9473 189 9796 23515 16551 16551 1 94175 0 LSEDYGVLK LGPLNIPLLADVTRRLSEDYGVLKTDEGIA ADVTRRLSEDYGVLKTDEGIAYRGLFIIDG R L S L K T 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 0 1022.5284 P32119 P32119 111 119 PRDX2 Peroxiredoxin-2 yes yes 2 0.0018429 137.9 By MS/MS 9 0 1 1 956130 956130 0 9474 763 9797 23516 16552 16552 1 548730 0 LSEDYGVLKTDEGIAYR LGPLNIPLLADVTRRLSEDYGVLKTDEGIA EDYGVLKTDEGIAYRGLFIIDGKGVLRQIT R L S Y R G 1 1 0 2 0 0 2 2 0 1 2 1 0 0 0 1 1 0 2 1 0 0 17 1 1927.9527 P32119 P32119 111 127 PRDX2 Peroxiredoxin-2 yes yes 2;3 0.0031065 119.17 By MS/MS 9 0 2 2 1154400 1154400 0 9475 763 9798 23517;23518 16553;16554 16553 2 662540 0 LSEEASQALIEAYVDMR LKDYIAYAHSTIMPRLSEEASQALIEAYVD EEASQALIEAYVDMRKIGSSRGMVSAYPRQ R L S M R K 3 1 0 1 0 1 3 0 0 1 2 0 1 0 0 2 0 0 1 1 0 0 17 0 1923.9248 P33991 P33991 702 718 MCM4 DNA replication licensing factor MCM4 yes yes 2 8.038E-11 169.3 By MS/MS 4 0 1 1 288710 288710 0 9476 773 9799 23519 16555 16555 525 1 7881.4 0 LSEECNSLSDVLDAFSK VLTKETKPNRISSRKLSEECNSLSDVLDAF EECNSLSDVLDAFSKAPTFPSSNYFTAMWT K L S S K A 1 0 1 2 1 0 2 0 0 0 3 1 0 1 0 4 0 0 0 1 0 0 17 0 1912.8724 Q9NYY8 Q9NYY8 159 175 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 3.8819E-44 268.9 By MS/MS 6 0 1 1 1007400 1007400 0 9477 2701 9800 23520 16556 16556 1 7855.6 0 LSEEEILENPDLFLTSEATDYGR ALHLIDEMDLNGDKKLSEEEILENPDLFLT NPDLFLTSEATDYGRQLHDDYFYHDEL___ K L S G R Q 1 1 1 2 0 0 5 1 0 1 4 0 0 1 1 2 2 0 1 0 0 0 23 0 2640.2443 Q14257 Q14257 283 305 RCN2 Reticulocalbin-2 yes yes 2;3 1.3929E-47 233.78 By MS/MS 6 0 2 2 23699000 23699000 0 9478 1426 9801 23521;23522 16557;16558 16557 2 184800 0 LSEENIDSSAGNGVLTK FTNTKVKPQFQEILRLSEENIDSSAGNGVL EENIDSSAGNGVLTKATVPIYATGVLTCYI R L S T K A 1 0 2 1 0 0 2 2 0 1 2 1 0 0 0 3 1 0 0 1 0 0 17 0 1732.8479 Q9P260 Q9P260 888 904 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 2 3.5851E-34 303.36 By MS/MS 3 0 1 1 663360 663360 0 9479 2735 9802 23523 16559 16559 1 17317 0 LSEIQALTLTK KNCDISVHLVEVSQKLSEIQALTLTKEKVP VSQKLSEIQALTLTKEKVPLERNAGSPVYM K L S T K E 1 0 0 0 0 1 1 0 0 1 3 1 0 0 0 1 2 0 0 0 0 0 11 0 1215.7075 Q7L592 Q7L592 161 171 NDUFAF7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 2 0.00053383 166.29 By MS/MS 7 0 1 1 2096800 2096800 0 9480 1766 9803 23524 16560 16560 1 37470 0 LSEISGIPLDDIEFAK EVVLESSSVDELREKLSEISGIPLDDIEFA SEISGIPLDDIEFAKGRGTFPCDISVLDIH K L S A K G 1 0 0 2 0 0 2 1 0 3 2 1 0 1 1 2 0 0 0 0 0 0 16 0 1745.9087 Q96K76 Q96K76 1259 1274 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 7.7649E-06 142.97 By MS/MS 3 0 1 1 199930 199930 0 9481 2216 9804 23525 16561 16561 1 5219.3 0 LSEIVTLAK LACDDLDEAARMVVKLSEIVTLAKQAHVDV ARMVVKLSEIVTLAKQAHVDVKFQLPI___ K L S A K Q 1 0 0 0 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 9 0 972.58555 Q9P2R7 Q9P2R7 443 451 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 2.4235E-08 208.37 By MS/MS 7 0 1 1 19502000 19502000 0 9482 2741 9805 23526 16562 16562 1 348510 0 LSELAVEK IKYASRSRKLILAQKLSELAVEKAAELTAT KLILAQKLSELAVEKAAELTATQVEEEEEE K L S E K A 1 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 887.4964 O75717 O75717 812 819 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0056149 134.81 By MS/MS 3.5 0.5 1 1 2 1478200 1478200 0 9483 325 9806 23527;23528 16563 16563 1 39298 0 LSELDLSYNQLTR AIERISPDAWEFCQRLSELDLSYNQLTRLD QRLSELDLSYNQLTRLDESAFVGLSLLERL R L S T R L 0 1 1 1 0 1 1 0 0 0 4 0 0 0 0 2 1 0 1 0 0 0 13 0 1550.794 O94898 O94898 313 325 LRIG2 Leucine-rich repeats and immunoglobulin-like domains protein 2 yes yes 2 1.4023E-08 151.13 By MS/MS 3 0 1 1 944880 944880 0 9484 356 9807 23529 16564 16564 0 24666 0 LSELQLR GEHANDYAEIAAKDKLSELQLRVRQLVEQV AEIAAKDKLSELQLRVRQLVEQVEQIQKEQ K L S L R V 0 1 0 0 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 857.49707 Q9BVK6 Q9BVK6 161 167 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2 0.034542 111.82 By MS/MS 9 0 1 1 1195700 1195700 0 9485 2379 9808 23530 16565 16565 1 686210 0 LSENVIDR EADENENITVVKGIRLSENVIDRMKESSPS TVVKGIRLSENVIDRMKESSPSGSKSQRYS R L S D R M 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 944.49271 Q9NX63 Q9NX63 28 35 CHCHD3 MICOS complex subunit MIC19 yes yes 2 0.0010357 172.25 By MS/MS 8 0 1 1 5057200 5057200 0 9486 2682 9809 23531 16566 16566 1 333620 0 LSEPEEELLQQFK GSNHTYLKNTYNKPKLSEPEEELLQQFKRE PKLSEPEEELLQQFKREEVSPTGSFSAHYL K L S F K R 0 0 0 0 0 2 4 0 0 0 3 1 0 1 1 1 0 0 0 0 0 0 13 0 1588.7985 Q9Y2U8 Q9Y2U8 446 458 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 9.6596E-12 203.02 By MS/MS 4 0 1 1 318670 318670 0 9487 2902 9810 23532 16567 16567 1 8699.4 0 LSEQEGSR ILCTLFGILAYTHFKLSEQEGSRSKLAQRP LAYTHFKLSEQEGSRSKLAQRP________ K L S S R S 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 8 0 904.42502 Q7Z769 Q7Z769 299 306 SLC35E3 Solute carrier family 35 member E3 yes yes 2 0.003131 148.99 By MS/MS 1 0 1 1 127030 127030 0 9488 1805 9811 23533 16568 16568 1 6206.6 0 LSESVLSPPCFVR RSEATFQFTVERFSRLSESVLSPPCFVRNL SRLSESVLSPPCFVRNLPWKIMVMPRFYPD R L S V R N 0 1 0 0 1 0 1 0 0 0 2 0 0 1 2 3 0 0 0 2 0 0 13 0 1489.7599 Q93009 Q93009 81 93 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 2 0.012797 91.584 By MS/MS 3 0.816 1 1 1 3 541110 541110 0 9489 2097 9812 23534;23535;23536 16569 16569 1 15523 0 LSEVQASLHG MYHRAQKMGTPSCSRLSEVQASLHG_____ PSCSRLSEVQASLHG_______________ R L S H G - 1 0 0 0 0 1 1 1 1 0 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1039.5298 Q9NXW2 Q9NXW2 366 375 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.00015623 159.28 By MS/MS 7 0 1 1 5215100 5215100 0 9490 2694 9813 23537 16570 16570 1 93195 0 LSFAVPFR DEMMKSYVAWDREKRLSFAVPFREMKPVIF AWDREKRLSFAVPFREMKPVIFLDVFLPRV R L S F R E 1 1 0 0 0 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 8 0 935.52289 P78527 P78527 892 899 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.036889 96.492 By MS/MS 2 0.816 1 1 1 3 539640 539640 0 9491 1197 9814 23538;23539;23540 16571 16571 1 24555 0 LSFEDFVTMTASR EAFREKDTAVQGNIRLSFEDFVTMTASRML IRLSFEDFVTMTASRML_____________ R L S S R M 1 1 0 1 0 0 1 0 0 0 1 0 1 2 0 2 2 0 0 1 0 0 13 0 1502.7075 Q9UBV8 Q9UBV8 270 282 PEF1 Peflin yes yes 2 0.00018792 144.7 By MS/MS 8 0 1 1 296680 296680 0 9492 2759 9815 23541 16572 16572 1611 1 19572 0 LSFGLEDEPLETATK SAGSVSKQFEGLADKLSFGLEDEPLETATK LSFGLEDEPLETATKEN_____________ K L S T K E 1 0 0 1 0 0 3 1 0 0 3 1 0 1 1 1 2 0 0 0 0 0 15 0 1648.8196 O94905 O94905 323 337 ERLIN2 Erlin-2 yes yes 2 2.9564E-14 200.82 By MS/MS 7 0 1 1 454240 454240 0 9493 357 9816 23542 16573 16573 1 8117.3 0 LSFGLEDEPLETATKEN SAGSVSKQFEGLADKLSFGLEDEPLETATK FGLEDEPLETATKEN_______________ K L S E N - 1 0 1 1 0 0 4 1 0 0 3 1 0 1 1 1 2 0 0 0 0 0 17 1 1891.9051 O94905 O94905 323 339 ERLIN2 Erlin-2 yes yes 2 3.2408E-68 304.38 By MS/MS 7 0 1 1 607050 607050 0 9494 357 9817 23543 16574 16574 1 10848 0 LSFHQTQVSQR LTKDVLLDVAYAYGKLSFHQTQVSQRLATD AYGKLSFHQTQVSQRLATDLLSLMPSLTSG K L S Q R L 0 1 0 0 0 3 0 0 1 0 1 0 0 1 0 2 1 0 0 1 0 0 11 0 1329.6789 Q969Z0 Q969Z0 305 315 TBRG4 Protein TBRG4 yes yes 2 3.129E-05 172.21 By MS/MS 6 0 1 1 10065000 10065000 0 9495 2112 9818 23544 16575 16575 1 78487 0 LSFLKEDSQSCR LSYEDLELAVGHLYRLSFLKEDSQSCRVAA LYRLSFLKEDSQSCRVAALEASGTLAALYP R L S C R V 0 1 0 1 1 1 1 0 0 0 2 1 0 1 0 3 0 0 0 0 0 0 12 1 1468.698 Q96T76 Q96T76 492 503 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 0.011372 127.17 By MS/MS 4 0 1 1 313510 313510 0 9496 2261 9819 23545 16576 16576 1 8558.5 0 LSFMPFFLK LREELKPIAFARGIKLSFMPFFLKAASLGL FARGIKLSFMPFFLKAASLGLLQFPILNAS K L S L K A 0 0 0 0 0 0 0 0 0 0 2 1 1 3 1 1 0 0 0 0 0 0 9 0 1128.6042 P11182 P11182 305 313 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 2 0.021239 101.6 By MS/MS 6 0 1 1 195520 195520 0 9497 550 9820 23546 16577 16577 1 1524.6 0 LSFNPTQLEEQCHI EKFDKALKALPMHIRLSFNPTQLEEQCHI_ RLSFNPTQLEEQCHI_______________ R L S H I - 0 0 1 0 1 2 2 0 1 1 2 0 0 1 1 1 1 0 0 0 0 0 14 0 1714.7985 CON__P02754 CON__P02754 149 162 yes yes 2 6.4639E-18 218.62 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 18706000 18706000 0 + 9498 41 9821 23547;23548;23549;23550;23551;23552 16578;16579 16578 2 744690 0 LSFQHDPETSVLVLR PAAVVLQTKGSPESRLSFQHDPETSVLVLR LSFQHDPETSVLVLRKPGINVASDWSIHLR R L S L R K 0 1 0 1 0 1 1 0 1 0 3 0 0 1 1 2 1 0 0 2 0 0 15 0 1739.9206 Q14697 Q14697 915 929 GANAB Neutral alpha-glucosidase AB yes yes 3 0.0026436 104.9 By MS/MS 4 0 1 1 1650900 1650900 0 9499 1443 9822 23553 16580 16580 1 45068 0 LSFSVSR VLHNGLGRYVQQLQRLSFSVSRDGASSRGA RYVQQLQRLSFSVSRDGASSRGAREFVERE R L S S R D 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 7 0 794.42865 Q8N983 Q8N983 29 35 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.027181 116.9 By MS/MS 10 0 1 1 1268900 1268900 0 9500 1935 9823 23554 16581 16581 1 1348700 0 LSGEAFDINK SCGGEGIVLQHNPWKLSGEAFDINKLIRDT HNPWKLSGEAFDINKLIRDTNSIKYKLPVH K L S N K L 1 0 1 1 0 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1092.5451 Q8TEQ6 Q8TEQ6 515 524 GEMIN5 Gem-associated protein 5 yes yes 2 4.3996E-07 190.02 By MS/MS 3 0 1 1 2742900 2742900 0 9501 2003 9824 23555 16582 16582 1 71604 0 LSGGLGAGSCR GSSGLGGGSSRTSCRLSGGLGAGSCRLGSA TSCRLSGGLGAGSCRLGSAGGLGSTLGGSS R L S C R L 1 1 0 0 1 0 0 4 0 0 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1033.4975 CON__Q04695;Q04695 CON__Q04695 31 41 KRT17 Keratin, type I cytoskeletal 17 yes no 2 0.0051527 128.91 By MS/MS 4 0 1 1 274910 0 274910 + 9502 54 9825 23556 16583 16583 1 0 574450 LSGLEQPQGALQTR TDELWASLEAAAKRKLSGLEQPQGALQTRR KLSGLEQPQGALQTRRRKKKRPGSTSP___ K L S T R R 1 1 0 0 0 3 1 2 0 0 3 0 0 0 1 1 1 0 0 0 0 0 14 0 1496.7947 Q6RFH5 Q6RFH5 360 373 WDR74 WD repeat-containing protein 74 yes yes 2 5.3696E-18 221.09 By MS/MS 7 0 1 1 859860 859860 0 9503 1723 9826 23557 16584 16584 1 15366 0 LSGYEEALK LPVDQKCEHKLWKARLSGYEEALKIFQKIK KLWKARLSGYEEALKIFQKIKDEKSPEWSK R L S L K I 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1008.5128 Q14008 Q14008 25 33 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.004006 117.89 By MS/MS 2 0 1 1 789170 789170 0 9504 1405 9827 23558 16585 16585 1 39226 0 LSHLLSEKPEDK SHDLDSNQAAMVLIRLSHLLSEKPEDKGLL LIRLSHLLSEKPEDKGLLIQDAHFHQLLCL R L S D K G 0 0 0 1 0 0 2 0 1 0 3 2 0 0 1 2 0 0 0 0 0 0 12 1 1394.7405 Q969Z0 Q969Z0 107 118 TBRG4 Protein TBRG4 yes yes 2;4 0.0002686 201.84 By MS/MS By matching 6 0 3 2 1 7142300 7122100 20166 9505 2112 9828 23559;23560;23561 16586;16587 16587 2 55538 61846 LSIGLQSLDDTELR PGSRLAEFGAAGVNRLSIGLQSLDDTELRL RLSIGLQSLDDTELRLLGRTHSACDALRTL R L S L R L 0 1 0 2 0 1 1 1 0 1 4 0 0 0 0 2 1 0 0 0 0 0 14 0 1558.8203 Q9HA92 Q9HA92 153 166 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial yes yes 2 6.7271E-08 182.35 By MS/MS 6.5 0.5 1 1 2 1074800 1074800 0 9506 2541 9829 23562;23563 16588 16588 1 12157 0 LSILYPATTGR TARVVFVFGPDKKLKLSILYPATTGRNFDE KKLKLSILYPATTGRNFDEILRVVISLQLT K L S G R N 1 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 2 0 1 0 0 0 11 0 1190.6659 P30041 P30041 145 155 PRDX6 Peroxiredoxin-6 yes yes 2 0.043104 85.807 By MS/MS 8.5 0.5 1 1 2 1495200 1495200 0 9507 729 9830 23564;23565 16589 16589 1 133290 0 LSIPTYGLQCTR PIEGSTTVFHSLASRLSIPTYGLQCTRAAP ASRLSIPTYGLQCTRAAPLDSIHSLAAYYI R L S T R A 0 1 0 0 1 1 0 1 0 1 2 0 0 0 1 1 2 0 1 0 0 0 12 0 1407.718 P49327 P49327 2264 2275 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0027864 117.14 By MS/MS 2.4 1.02 1 2 1 1 5 13175000 13175000 0 9508 915 9831 23566;23567;23568;23569;23570 16590;16591;16592;16593;16594 16594 5 609740 0 LSISETYDLK LEKKYASSANLHLPKLSISETYDLKSVLGD LHLPKLSISETYDLKSVLGDVGITEVFSDR K L S L K S 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 2 1 0 1 0 0 0 10 0 1167.6023 CON__P34955 CON__P34955 313 322 yes yes 2 0.00074319 134.77 By MS/MS 8.33 1.7 1 1 1 3 1080600 1080600 0 + 9509 51 9832 23571;23572;23573 16595;16596;16597 16596 3 1004200 0 LSIVPVRR KEVATAIRGAIILAKLSIVPVRRGYWGNKI GAIILAKLSIVPVRRGYWGNKIGKPHTVPC K L S R R G 0 2 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 8 1 938.60253 P15880 P15880 160 167 RPS2 40S ribosomal protein S2 yes yes 2 0.049004 130.04 By MS/MS 8.5 0.5 1 1 2 3109400 3109400 0 9510 602 9833 23574;23575 16598 16598 1 240360 0 LSKDPNIVIAK HCKNLEPKYKELGEKLSKDPNIVIAKMDAT LGEKLSKDPNIVIAKMDATANDVPSPYEVR K L S A K M 1 0 1 1 0 0 0 0 0 2 1 2 0 0 1 1 0 0 0 1 0 0 11 1 1196.7129 P30101 P30101 423 433 PDIA3 Protein disulfide-isomerase A3 yes yes 3 0.0025348 101.93 By MS/MS 6 0 1 1 2815500 2815500 0 9511 736 9834 23576 16599 16599 1 21955 0 LSKEDIER TGKENKITITNDKGRLSKEDIERMVQEAEK ITNDKGRLSKEDIERMVQEAEKYKAEDEKQ R L S E R M 0 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 988.51892 P11142 P11142 510 517 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.0077734 168.26 By MS/MS By matching 6 1.15 3 1 1 1 5 1 34537000 34447000 90570 9512 546 9835 23577;23578;23579;23580;23581;23582 16600;16601 16601 2 1267600 268000 LSKEEIER TGKANKITITNDKGRLSKEEIERMVQEAEK ITNDKGRLSKEEIERMVQEAEKYKAEDEVQ R L S E R M 0 1 0 0 0 0 3 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 1002.5346 P0DMV9;P0DMV8 P0DMV9 510 517 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.013124 145.72 By MS/MS 5.4 1.02 1 2 1 1 5 68350000 68350000 0 9513 528 9836 23583;23584;23585;23586;23587 16602;16603 16603 2 2710800 0 LSLAQHLR VAREMHSLRAEALYRLSLAQHLRDRVFWLP RAEALYRLSLAQHLRDRVFWLPHNMDFRGR R L S L R D 1 1 0 0 0 1 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 936.5505 O00411 O00411 783 790 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.053435 77.282 By MS/MS 3 0 1 1 812840 812840 0 9514 92 9837 23588 16604 16604 1 21219 0 LSLDDLLQR ETMLPLLLTAVSEGRLSLDDLLQRLHHNPR AVSEGRLSLDDLLQRLHHNPRRIFHLPPQE R L S Q R L 0 1 0 2 0 1 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 9 0 1071.5924 P27708 P27708 1723 1731 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 8.5955E-05 171.53 By MS/MS 3 1.41 1 1 1 1 1 5 1664200 1664200 0 9515 709 9838 23589;23590;23591;23592;23593 16605;16606;16607;16608 16605 4 69276 0 LSLDELHR DMDELKKEVSMDDHKLSLDELHRKYGTDLS VSMDDHKLSLDELHRKYGTDLSRGLTSARA K L S H R K 0 1 0 1 0 0 1 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 981.52434 P05023 P05023 46 53 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.047207 92.439 By MS/MS 3 1.41 1 1 1 1 1 5 2119800 2119800 0 9516 463 9839 23594;23595;23596;23597;23598 16609 16609 1 69048 0 LSLDGQNIYNACCTLR ALLQYADPVSAQHAKLSLDGQNIYNACCTL SLDGQNIYNACCTLRIDFSKLTSLNVKYNN K L S L R I 1 1 2 1 2 1 0 1 0 1 3 0 0 0 0 1 1 0 1 0 0 0 16 0 1896.8822 P26599 P26599 239 254 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 2 1.327E-16 228.17 By MS/MS 6 0 1 1 4548500 4548500 0 9517 697 9840 23599 16610 16610 1 35469 0 LSLDVEQAPSGQHSQAQLSGQQQR WEEQLARLLQEAPGKLSLDVEQAPSGQHSQ SGQHSQAQLSGQQQRLLAFFKCCLLTDQLP K L S Q R L 2 1 0 1 0 7 1 2 1 0 3 0 0 0 1 4 0 0 0 1 0 0 24 0 2591.2688 O00411 O00411 202 225 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 7.6814E-08 120.32 By MS/MS 3 0 1 1 6625400 6625400 0 9518 92 9841 23600 16611 16611 1 172960 0 LSLELFGR MGMVISHDMLLGRWRLSLELFGRVFMEDVG MLLGRWRLSLELFGRVFMEDVGAEPGSILT R L S G R V 0 1 0 0 0 0 1 1 0 0 3 0 0 1 0 1 0 0 0 0 0 0 8 0 933.52837 O95071 O95071 2191 2198 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0020889 159.2 By MS/MS 3.25 1.48 1 1 1 1 4 715540 715540 0 9519 364 9842 23601;23602;23603;23604 16612;16613;16614 16613 3 21831 0 LSLFSDLPEDTELQR RGSALEMEFKRGRFRLSLFSDLPEDTELQR LSLFSDLPEDTELQRKLDHEIRMREGACKL R L S Q R K 0 1 0 2 0 1 2 0 0 0 4 0 0 1 1 2 1 0 0 0 0 0 15 0 1761.8785 Q9BST9 Q9BST9 29 43 RTKN Rhotekin yes yes 2 0.0052723 103.44 By MS/MS 5 0 1 1 137240 137240 0 9520 2341 9843 23605 16615 16615 1 5641 0 LSLLLNDISR RELEMIGFIENNVSKLSLLLNDISRKSEGL NNVSKLSLLLNDISRKSEGLSGRVLRKLPF K L S S R K 0 1 1 1 0 0 0 0 0 1 4 0 0 0 0 2 0 0 0 0 0 0 10 0 1142.6659 Q15645 Q15645 369 378 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 2 3.2849E-05 173.24 By MS/MS 6.5 0.5 1 1 2 2640200 2640200 0 9521 1512 9844 23606;23607 16616 16616 1 41849 0 LSLNIDPDAK PDTKAYGDRIERMLRLSLNIDPDAKVEEEP ERMLRLSLNIDPDAKVEEEPEEEPEETAED R L S A K V 1 0 1 2 0 0 0 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1084.5764 P14625 P14625 745 754 HSP90B1 Endoplasmin yes yes 2 0.013683 94.409 By MS/MS By matching 4.33 0.471 2 1 2 1 2994400 2960900 33481 9522 589 9845 23608;23609;23610 16617 16617 1 83329 69961 LSLPQNETVADTTLTK GGKDMSIIQWKLVEKLSLPQNETVADTTLT SLPQNETVADTTLTKAPVSSTESVIQSNTP K L S T K A 1 0 1 1 0 1 1 0 0 0 3 1 0 0 1 1 4 0 0 1 0 0 16 0 1729.9098 Q9HC35 Q9HC35 868 883 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.010512 92.151 By MS/MS 1 0 1 1 371100 371100 0 9523 2557 9846 23611 16618 16618 1 18131 0 LSLSGLDGGDSINR PETAVRHESCSGLYKLSLSGLDGGDSINRS KLSLSGLDGGDSINRSFLLLAASTLLKFLP K L S N R S 0 1 1 2 0 0 0 3 0 1 3 0 0 0 0 3 0 0 0 0 0 0 14 0 1402.7052 Q70CQ2 Q70CQ2 1680 1693 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 2 0.001094 121.68 By MS/MS 1.5 0.5 1 1 2 224820 224820 0 9524 1751 9847 23612;23613 16619 16619 1 11065 0 LSLVDLAGSER LYDVKSGTSGEKVGKLSLVDLAGSERATKT KVGKLSLVDLAGSERATKTGAAGDRLKEGS K L S E R A 1 1 0 1 0 0 1 1 0 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1158.6245 Q9NQT8 Q9NQT8 249 259 KIF13B Kinesin-like protein KIF13B yes yes 2 3.907E-11 210.08 By MS/MS 2.5 1.12 1 1 1 1 4 5366400 5366400 0 9525 2593 9848 23614;23615;23616;23617 16620;16621 16620 2 153750 0 LSNCANR KFEEMCGLVMGMFTRLSNCANRTILYDMYS LVMGMFTRLSNCANRTILYDMYSYVWDIKS R L S N R T 1 1 2 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 833.38138 O60502 O60502 628 634 MGEA5 Protein O-GlcNAcase yes yes 2 0.04569 104.11 By MS/MS 3.5 0.5 1 1 2 269150 269150 0 9526 251 9849 23618;23619 16622 16622 1 7251.7 0 LSNIFVIGK VVHVKDANGNSFATRLSNIFVIGKGNKPWI NSFATRLSNIFVIGKGNKPWISLPRGKGIR R L S G K G 0 0 1 0 0 0 0 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 9 0 989.59097 P62701 P62701 222 230 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.00075026 155.58 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 16657000 16469000 187490 9527 1140 9850 23620;23621;23622;23623 16623;16624;16625 16624 3 1309500 1599500 LSNKVEAIDVEEAK LESLIRLAEAHAKVRLSNKVEAIDVEEAKR RLSNKVEAIDVEEAKRLHREALKQSATDPR R L S A K R 2 0 1 1 0 0 3 0 0 1 1 2 0 0 0 1 0 0 0 2 0 0 14 1 1543.8094 P33991 P33991 749 762 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.0020708 123.63 By MS/MS 4.5 0.5 1 1 2 2489100 2489100 0 9528 773 9851 23624;23625 16626 16626 1 70994 0 LSNKVEAIDVEEAKR LESLIRLAEAHAKVRLSNKVEAIDVEEAKR LSNKVEAIDVEEAKRLHREALKQSATDPRT R L S K R L 2 1 1 1 0 0 3 0 0 1 1 2 0 0 0 1 0 0 0 2 0 0 15 2 1699.9105 P33991 P33991 749 763 MCM4 DNA replication licensing factor MCM4 yes yes 3;4 7.4197E-10 178.47 By MS/MS 5.2 1.17 2 1 1 1 5 16610000 16610000 0 9529 773 9852 23626;23627;23628;23629;23630 16627;16628 16627 2 440010 0 LSNSDSQDIQGR GPRPGCQPSSPCVPKLSNSDSQDIQGRNRD VPKLSNSDSQDIQGRNRDSQNGAIAPGHVS K L S G R N 0 1 1 2 0 2 0 1 0 1 1 0 0 0 0 3 0 0 0 0 0 0 12 0 1318.6113 O14545 O14545 486 497 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 7.4676E-17 227.36 By MS/MS By matching 5.33 0.471 2 1 2 1 2114300 2103900 10415 9530 113 9853 23631;23632;23633 16629 16629 1 77367 30817 LSNTQGVVSAFSTMMSVHR PLTTNLINLLAENGRLSNTQGVVSAFSTMM QGVVSAFSTMMSVHRGEVPCTVTSASPLEE R L S H R G 1 1 1 0 0 1 0 1 1 0 1 0 2 1 0 4 2 0 0 3 0 0 19 0 2050.9928 P48047 P48047 118 136 ATP5O ATP synthase subunit O, mitochondrial yes yes 3 0.040483 48.053 By MS/MS 9 0 1 1 520780 520780 0 9531 900 9854 23634 16630 16630 635;636 1 298880 0 LSNTSPEFQEMSLLER FYFSTTYDLTHTLQRLSNTSPEFQEMSLLE SNTSPEFQEMSLLERADQRFVWNGHLLREL R L S E R A 0 1 1 0 0 1 3 0 0 0 3 0 1 1 1 3 1 0 0 0 0 0 16 0 1879.8986 Q9NTJ5 Q9NTJ5 146 161 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 2.1547E-21 228.17 By MS/MS 2 0.816 2 2 2 6 2042300 2042300 0 9532 2631 9855;9856 23635;23636;23637;23638;23639;23640 16631;16632;16633 16631 1554 3 89881 0 LSPAQGPPQPQSSAK FLSSLLPQSKKSPSRLSPAQGPPQPQSSAK LSPAQGPPQPQSSAKKESFGGQGTKGKDPT R L S A K K 2 0 0 0 0 3 0 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 15 0 1491.7682 A4D1P6 A4D1P6 276 290 WDR91 WD repeat-containing protein 91 yes yes 2 0.00029884 130.15 By MS/MS 5 0 1 1 610850 610850 0 9533 15 9857 23641 16634 16634 1 25108 0 LSPDAIPGK YASLNFRDIMLATGKLSPDAIPGKWTSQDS MLATGKLSPDAIPGKWTSQDSLLGMEFSGR K L S G K W 1 0 0 1 0 0 0 1 0 1 1 1 0 0 2 1 0 0 0 0 0 0 9 0 896.49673 P49327 P49327 1583 1591 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.030661 90.709 By MS/MS 2 0.816 1 1 1 3 6503300 6503300 0 9534 915 9858 23642;23643;23644 16635 16635 1 319520 0 LSPEELLLR AALLRDGETLEELMKLSPEELLLRWANFHL LEELMKLSPEELLLRWANFHLENSGWQKIN K L S L R W 0 1 0 0 0 0 2 0 0 0 4 0 0 0 1 1 0 0 0 0 0 0 9 0 1068.6179 P13797;P13796;Q14651 P13797 267 275 PLS3;LCP1;PLS1 Plastin-3;Plastin-2;Plastin-1 yes no 2 0.036381 87.476 By MS/MS 5 0 1 1 380920 380920 0 9535 580 9859 23645 16636 16636 1 15657 0 LSPEPWTPETGLVTDAFK ISASLEKFEIPVKIRLSPEPWTPETGLVTD EPWTPETGLVTDAFKLKRKELKTHYQADIE R L S F K L 1 0 0 1 0 0 2 1 0 0 2 1 0 1 3 1 3 1 0 1 0 0 18 0 1986.9939 O95573;O60488 O95573 682 699 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 no no 2 2.4132E-05 146.67 By MS/MS 5 0.816 1 1 1 3 2000800 2000800 0 9536 400;248 9860 23646;23647;23648 16637;16638 16637 2 43631 0 LSPEQLEEVR GHEFAVKIMEVTAERLSPEQLEEVREATRR VTAERLSPEQLEEVREATRRETHILRQVAG R L S V R E 0 1 0 0 0 1 3 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 10 0 1198.6194 P15735 P15735 62 71 PHKG2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform yes yes 2 0.0065057 102.53 By MS/MS 5.5 1.12 1 1 1 1 4 3455700 3455700 0 9537 600 9861 23649;23650;23651;23652 16639 16639 1 53084 0 LSPFMADIR GEYAVHVLCNSEDIRLSPFMADIRDAPQDF NSEDIRLSPFMADIRDAPQDFHPDRVKARG R L S I R D 1 1 0 1 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 9 0 1048.5376 P21333 P21333 656 664 FLNA Filamin-A yes yes 2 0.025096 87.308 By MS/MS 2 0 1 1 358880 358880 0 9538 648 9862 23653 16640 16640 437 1 17838 0 LSPPSSSAASSYSFSDLNSTR LYEKKIFEYETQRRRLSPPSSSAASSYSFS SAASSYSFSDLNSTRGDADMYDLPKKEDAL R L S T R G 2 1 1 1 0 0 0 0 0 0 2 0 0 1 2 9 1 0 1 0 0 0 21 0 2159.9971 P50402 P50402 48 68 EMD Emerin yes yes 2 4.5294E-08 140.96 By MS/MS 8 0 1 1 4301300 4301300 0 9539 945 9863 23654 16641 16641 1 283760 0 LSPPYSSPQEFAQDVGR GTLDLTLIRARLQEKLSPPYSSPQEFAQDV PPYSSPQEFAQDVGRMFKQFNKLTEDKADV K L S G R M 1 1 0 1 0 2 1 1 0 0 1 0 0 1 3 3 0 0 1 1 0 0 17 0 1876.8955 Q13263 Q13263 751 767 TRIM28 Transcription intermediary factor 1-beta yes yes 2 7.4795E-05 141.46 By MS/MS 5.88 2.71 1 1 1 1 1 1 1 1 8 12707000 12707000 0 9540 1351 9864 23655;23656;23657;23658;23659;23660;23661;23662 16642;16643;16644;16645 16642 4 570520 0 LSPVGWVSSSQGK GPQGGRGAATMSLGKLSPVGWVSSSQGKRR GKLSPVGWVSSSQGKRRLTADMISHPLGDF K L S G K R 0 0 0 0 0 1 0 2 0 0 1 1 0 0 1 4 0 1 0 2 0 0 13 0 1330.6881 Q00587 Q00587 18 30 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.00016357 151.13 By MS/MS 6 0 1 1 5482900 5482900 0 9541 1234 9865 23663 16646 16646 1 42756 0 LSQLEGVNVER ERQELRILVGTNLVRLSQLEGVNVERYKQI NLVRLSQLEGVNVERYKQIVLTGILEQVVN R L S E R Y 0 1 1 0 0 1 2 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 0 1242.6568 Q96QK1 Q96QK1 227 237 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0018572 122.18 By MS/MS 6 0.816 1 1 1 3 17112000 17112000 0 9542 2242 9866 23664;23665;23666 16647;16648 16648 2 598320 0 LSQLENLQK RLCKCHYIEDDCLLRLSQLENLQKTILEME DDCLLRLSQLENLQKTILEMEIISCGNITD R L S Q K T 0 0 1 0 0 2 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1071.5924 Q99766 Q99766 145 153 ATP5S ATP synthase subunit s, mitochondrial yes yes 2 0.00024366 161.27 By MS/MS 9.5 0.5 1 1 2 1403900 1403900 0 9543 2290 9867 23667;23668 16649;16650 16649 2 1005200 0 LSQMATILNLER LTTVTTWTIRDKFARLSQMATILNLERVTE FARLSQMATILNLERVTEILDYWGPNSGPL R L S E R V 1 1 1 0 0 1 1 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 12 0 1387.7493 Q9H9E3 Q9H9E3 730 741 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 2 0.0020925 120.87 By MS/MS 5 0 1 1 188140 188140 0 9544 2534 9868 23669 16651 16651 1 7733.5 0 LSQMAVQGLQQFK EFRAPTLASLENCMKLSQMAVQGLQQFKSP MKLSQMAVQGLQQFKSPLLQLPHIEEDNLR K L S F K S 1 0 0 0 0 4 0 1 0 0 2 1 1 1 0 1 0 0 0 1 0 0 13 0 1476.7759 Q9UGP8 Q9UGP8 369 381 SEC63 Translocation protein SEC63 homolog yes yes 2 0.0014309 119.27 By MS/MS 4 0 1 1 1428300 1428300 0 9545 2775 9869 23670 16652 16652 1620 1 38990 0 LSQNNFALGYK WLAGYQMSFDTAKSKLSQNNFALGYKAADF AKSKLSQNNFALGYKAADFQLHTHVNDGTE K L S Y K A 1 0 2 0 0 1 0 1 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1253.6404 Q9Y277 Q9Y277 164 174 VDAC3 Voltage-dependent anion-selective channel protein 3 yes yes 2 2.4539E-05 173.24 By MS/MS By matching 8.75 0.829 2 1 1 3 1 1702100 1683300 18866 9546 2873 9870 23671;23672;23673;23674 16653 16653 1 193950 160950 LSQSDEDVIR LATPELGSSLKKKKRLSQSDEDVIRLIGQH KKKKRLSQSDEDVIRLIGQHLNGLGLNQTV R L S I R L 0 1 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1160.5673 Q9H7D7 Q9H7D7 120 129 WDR26 WD repeat-containing protein 26 yes yes 2 0.00016334 158.47 By MS/MS By matching 5 0 2 1 1 2456200 2436800 19433 9547 2515 9871 23675;23676 16654 16654 1 100160 57502 LSQSLLELWR TGKPYVPLLEAEEVRLSQSLLELWRRRGPV AEEVRLSQSLLELWRRRGPVWQEAPQLPVD R L S W R R 0 1 0 0 0 1 1 0 0 0 4 0 0 0 0 2 0 1 0 0 0 0 10 0 1243.6925 Q7L2E3 Q7L2E3 413 422 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00030656 152.54 By MS/MS 3.5 0.5 1 1 2 142420 142420 0 9548 1763 9872 23677;23678 16655 16655 1 3784.2 0 LSQSPDSNLCDK QDKLRDMGIVDILHKLSQSPDSNLCDKAKM LHKLSQSPDSNLCDKAKMALQQYLA_____ K L S D K A 0 0 1 2 1 1 0 0 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1362.6085 Q8IUR7 Q8IUR7 652 663 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 4.9536E-05 166.11 By MS/MS 5 0 1 1 756240 756240 0 9549 1854 9873 23679 16656 16656 1 31085 0 LSQTLSLVPR TPTYARLVQKAELVRLSQTLSLVPRLHWLL AELVRLSQTLSLVPRLHWLLVEDAEGPTPL R L S P R L 0 1 0 0 0 1 0 0 0 0 3 0 0 0 1 2 1 0 0 1 0 0 10 0 1112.6554 O94766 O94766 96 105 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes yes 2 3.5982E-05 172.88 By MS/MS 7 0 1 1 1749500 1749500 0 9550 348 9874 23680 16657 16657 1 31263 0 LSQVSDSVSGQTVVDPK MRKIGQARNTLMDMRLSQVSDSVSGQTVVD QVSDSVSGQTVVDPKGYLTDLNSMIPTHGG R L S P K G 0 0 0 2 0 2 0 1 0 0 1 1 0 0 1 4 1 0 0 4 0 0 17 0 1744.8843 O94906 O94906 255 271 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 2.5282E-43 293.41 By MS/MS 4.5 0.5 1 1 2 2311900 2311900 0 9551 358 9875 23681;23682 16658 16658 1 64987 0 LSSDVCPTSDK VSAGEYTYYFRVCGKLSSDVCPTSDKSKVV VCGKLSSDVCPTSDKSKVVSSCQEKREPQG K L S D K S 0 0 0 2 1 0 0 0 0 0 1 1 0 0 1 3 1 0 0 1 0 0 11 0 1207.5391 P11717 P11717 1265 1275 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0052031 106.88 By MS/MS 2 0 1 1 396350 396350 0 9552 557 9876 23683 16659 16659 1 19701 0 LSSDVLTLLIK PQARALCGLDESKAKLSSDVLTLLIKQYCR SKAKLSSDVLTLLIKQYCRESGVRNLQKQV K L S I K Q 0 0 0 1 0 0 0 0 0 1 4 1 0 0 0 2 1 0 0 1 0 0 11 0 1200.7329 P36776 P36776 691 701 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.00010969 160.36 By MS/MS 5.5 1.12 1 1 1 1 4 1932500 1932500 0 9553 809 9877 23684;23685;23686;23687 16660;16661 16661 2 44824 0 LSSEFVFNNPNIK QLTLLGTEMDYVEDKLSSEFVFNNPNIKGT DKLSSEFVFNNPNIKGTCGCGESFNI____ K L S I K G 0 0 3 0 0 0 1 0 0 1 1 1 0 2 1 2 0 0 0 1 0 0 13 0 1507.7671 Q9BUE6 Q9BUE6 106 118 ISCA1 Iron-sulfur cluster assembly 1 homolog, mitochondrial yes yes 2 0.044893 73.887 By MS/MS 10 0 1 1 136810 136810 0 9554 2362 9878 23688 16662 16662 1 145420 0 LSSETYSQAK DVKILLTQENPFFRKLSSETYSQAKDLAKG PFFRKLSSETYSQAKDLAKGSIVLKYEPDS K L S A K D 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 3 1 0 1 0 0 0 10 0 1112.535 Q08J23 Q08J23 641 650 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.0019183 117.53 By MS/MS 4 0 1 1 450680 450680 0 9555 1295 9879 23689 16663 16663 1 12303 0 LSSEVSGSGSGNFGEEGNPQGK ARPRHPAEAPNNGARLSSEVSGSGSGNFGE SGSGNFGEEGNPQGKEDQEGSGGDYMPMNN R L S G K E 0 0 2 0 0 1 3 6 0 0 1 1 0 1 1 5 0 0 0 1 0 0 22 0 2122.9403 O14654 O14654 456 477 IRS4 Insulin receptor substrate 4 yes yes 2 4.9574E-14 170.35 By MS/MS 2 0.816 1 1 1 3 1168700 1168700 0 9556 118 9880 23690;23691;23692 16664 16664 1 34472 0 LSSLFVK MRHHIETGGGQLPAKLSSLFVKCLQNPSSD GGGQLPAKLSSLFVKCLQNPSSDIRLVAEK K L S V K C 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 1 0 0 7 0 792.47454 Q92616 Q92616 2551 2557 GCN1L1 Translational activator GCN1 yes yes 2 0.015603 138.48 By MS/MS 2.5 0.5 1 1 2 861610 861610 0 9557 2068 9881 23693;23694 16665 16665 1 39826 0 LSSPATLNSR NFNGNTLDNDIMLIKLSSPATLNSRVATVS IMLIKLSSPATLNSRVATVSLPRSCAAAGT K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 10 0 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 7.49E-06 179.81 By MS/MS By MS/MS 4.89 3.01 11 11 7 5 10 7 3 6 3 9 19 53 4053000000 3696800000 356200000 + 9558 33 9882 23695;23696;23697;23698;23699;23700;23701;23702;23703;23704;23705;23706;23707;23708;23709;23710;23711;23712;23713;23714;23715;23716;23717;23718;23719;23720;23721;23722;23723;23724;23725;23726;23727;23728;23729;23730;23731;23732;23733;23734;23735;23736;23737;23738;23739;23740;23741;23742;23743;23744;23745;23746;23747;23748;23749;23750;23751;23752;23753;23754;23755;23756;23757;23758;23759;23760;23761;23762;23763;23764;23765;23766 16666;16667;16668;16669;16670;16671;16672;16673;16674;16675;16676;16677;16678;16679;16680;16681;16682;16683;16684;16685;16686;16687;16688;16689;16690;16691;16692;16693;16694;16695;16696;16697;16698;16699;16700;16701;16702;16703;16704;16705;16706;16707;16708;16709;16710;16711;16712;16713;16714;16715;16716;16717;16718;16719;16720;16721;16722;16723;16724;16725;16726;16727;16728;16729;16730;16731;16732;16733;16734;16735;16736;16737;16738;16739;16740;16741;16742;16743;16744;16745;16746;16747;16748;16749;16750;16751 16699 86 633320000 3768000000 LSSSAEFTGMTR AYSEVIETLPDGTERLSSSAEFTGMTRQDA TERLSSSAEFTGMTRQDAFLALTQKARGKR R L S T R Q 1 1 0 0 0 0 1 1 0 0 1 0 1 1 0 3 2 0 0 0 0 0 12 0 1285.5973 Q15031 Q15031 408 419 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0014482 144.17 By MS/MS 4.33 0.471 2 1 3 2852900 2852900 0 9559 1467 9883;9884 23767;23768;23769 16752;16753 16753 1151 2 81132 0 LSSSQGTIETSLQDIDSR AELGEISDIHTKLLRLSSSQGTIETSLQDI SQGTIETSLQDIDSRLSPGGSLADAWAHQE R L S S R L 0 1 0 2 0 2 1 1 0 2 2 0 0 0 0 5 2 0 0 0 0 0 18 0 1935.9385 Q9UHD2 Q9UHD2 508 525 TBK1 Serine/threonine-protein kinase TBK1 yes yes 2 0.00029354 141.65 By MS/MS 5 0 1 1 1004300 1004300 0 9560 2780 9885 23770 16754 16754 1 41279 0 LSSTQEGVR LQNIISKFLPPVLLKLSSTQEGVRKKVMEL PPVLLKLSSTQEGVRKKVMELLVHLNKRIK K L S V R K 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 9 0 975.49852 Q5VYK3 Q5VYK3 47 55 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00013625 168.26 By MS/MS 3 0 1 1 1021100 1021100 0 9561 1657 9886 23771 16755 16755 1 26657 0 LSTASEETVQNR SPPPAPPICLRRRTRLSTASEETVQNRVSL RTRLSTASEETVQNRVSLEKVLGITAQNSS R L S N R V 1 1 1 0 0 1 2 0 0 0 1 0 0 0 0 2 2 0 0 1 0 0 12 0 1333.6474 O43379 O43379 48 59 WDR62 WD repeat-containing protein 62 yes yes 2 5.7654E-05 164.33 By MS/MS 1.5 0.5 1 1 2 179530 179530 0 9562 195 9887 23772;23773 16756 16756 1 8817.4 0 LSTLCPSAVLQR DHYDIKMLTFLMLVRLSTLCPSAVLQRLDR LVRLSTLCPSAVLQRLDRLVEPLRATCTTK R L S Q R L 1 1 0 0 1 1 0 0 0 0 3 0 0 0 1 2 1 0 0 1 0 0 12 0 1343.7231 Q86VP6 Q86VP6 1130 1141 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0001533 154.85 By MS/MS 4 0.816 1 1 1 3 3172500 3172500 0 9563 1829 9888 23774;23775;23776 16757;16758 16758 2 87658 0 LSTQSNSNNIEPAR KSSFLASLNPKTWGRLSTQSNSNNIEPART RLSTQSNSNNIEPARTAGGSGLARAASKDT R L S A R T 1 1 3 0 0 1 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 14 0 1529.7434 Q14669 Q14669 1053 1066 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 0.0022307 143.55 By MS/MS 3 0.816 1 1 1 3 875450 875450 0 9564 1437 9889 23777;23778;23779 16759;16760 16760 2 32276 0 LSTVDMTGIPTLDNLQK NSSQEWKRLGVEQLRLSTVDMTGIPTLDNL TVDMTGIPTLDNLQKGVQFALKYQSLGQCV R L S Q K G 0 0 1 2 0 1 0 1 0 1 3 1 1 0 1 1 3 0 0 1 0 0 17 0 1844.9554 Q8WUK0 Q8WUK0 97 113 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 8.4734E-07 144.28 By MS/MS 9.5 0.5 1 1 2 2411900 2411900 0 9565 2017 9890 23780;23781 16761 16761 1321 1 1399300 0 LSTVVDADEIIVLDQGK KDVVKHRTSIFIAHRLSTVVDADEIIVLDQ TVVDADEIIVLDQGKVAERGTHHGLLANPH R L S G K V 1 0 0 3 0 1 1 1 0 2 2 1 0 0 0 1 1 0 0 3 0 0 17 0 1813.9673 O75027 O75027 667 683 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.0060889 101.53 By MS/MS 2 0 1 1 94889 94889 0 9566 276 9891 23782 16762 16762 1 4716.5 0 LSVADSQAEAK PTITEGVAAALLLLKLSVADSQAEAKLSSF LLLKLSVADSQAEAKLSSFWQLIVDEKKQV K L S A K L 3 0 0 1 0 1 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1117.5615 Q92616 Q92616 499 509 GCN1L1 Translational activator GCN1 yes yes 2 6.6685E-05 166.86 By MS/MS 3 1.41 1 1 1 1 1 5 6934400 6934400 0 9567 2068 9892 23783;23784;23785;23786;23787 16763;16764;16765 16763 3 303080 0 LSVDYGKK GGGTGSGFTSLLMERLSVDYGKKSKLEFSI TSLLMERLSVDYGKKSKLEFSIYPAPQVST R L S K K S 0 0 0 1 0 0 0 1 0 0 1 2 0 0 0 1 0 0 1 1 0 0 8 1 908.49673 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;P68366 P68363 157 164 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3 0.00043077 171.38 By MS/MS By matching 6.8 2.48 1 1 4 3 2 2 2 12 3 221160000 220360000 804920 9568 1185;1754;2314;1186 9893 23788;23789;23790;23791;23792;23793;23794;23795;23796;23797;23798;23799;23800;23801;23802 16766;16767;16768;16769;16770;16771;16772 16769 7 5539900 2491800 LSVGVTEPR PRARVTYGTPSLWARLSVGVTEPRACLTSG PSLWARLSVGVTEPRACLTSGTPGPRAQLT R L S P R A 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 2 0 0 9 0 956.5291 O43464 O43464 61 69 HTRA2 Serine protease HTRA2, mitochondrial yes yes 2 0.0053783 114.89 By MS/MS 10 0 1 1 155570 155570 0 9569 202 9894 23803 16773 16773 1 165350 0 LSVISVEDPPQR EVIKPGDLGVDLTSKLSVISVEDPPQRTAG TSKLSVISVEDPPQRTAGVKVETTEDLVAK K L S Q R T 0 1 0 1 0 1 1 0 0 1 1 0 0 0 2 2 0 0 0 2 0 0 12 0 1338.7143 P38117 P38117 222 233 ETFB Electron transfer flavoprotein subunit beta yes yes 2 0.0014364 128.35 By MS/MS 8.5 0.5 1 1 2 6076100 6076100 0 9570 816 9895 23804;23805 16774 16774 1 467710 0 LSVLGAITSVQQR DEFGTASNIKSRVNRLSVLGAITSVQQRLK NRLSVLGAITSVQQRLKLYNKVPPNGLVVY R L S Q R L 1 1 0 0 0 2 0 1 0 1 2 0 0 0 0 2 1 0 0 2 0 0 13 0 1370.7882 P62495 P62495 69 81 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 2 1.3761E-07 183.85 By MS/MS 6 0 1 1 2054700 2054700 0 9571 1137 9896 23806 16775 16775 1 16023 0 LSVPATFMLVSLDEGPGPPIK MYANLGVAEKTQLLKLSVPATFMLVSLDEG FMLVSLDEGPGPPIKYQYAELGKLYSVVSQ K L S I K Y 1 0 0 1 0 0 1 2 0 1 3 1 1 1 4 2 1 0 0 2 0 0 21 0 2167.1599 Q93008 Q93008 2199 2219 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0054188 73.887 By MS/MS 2 0 1 1 95916 95916 0 9572 2096 9897 23807 16776;16777 16777 1370 2 4767.5 0 LSVTATR SSFKITRGIEAVGGKLSVTATRENMAYTVE GIEAVGGKLSVTATRENMAYTVECLRGDVD K L S T R E 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 7 0 746.42865 P22695 P22695 110 116 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.027181 116.9 By MS/MS 7 0 1 1 10681000 10681000 0 9573 662 9898 23808 16778 16778 1 190880 0 LSVTVDPK ELQAEQEDRALRSFKLSVTVDPKYHPKIIG RALRSFKLSVTVDPKYHPKIIGRKGAVITQ K L S P K Y 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 2 0 0 8 0 857.48583 Q00341 Q00341 1055 1062 HDLBP Vigilin yes yes 2 0.0043405 139.97 By MS/MS 3 0 1 1 1502500 1502500 0 9574 1231 9899 23809 16779 16779 1 39222 0 LSYNTASNK ______________________________ LTYRRRLSYNTASNKTRLSRTPGNRIVYLY R L S N K T 1 0 2 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 9 0 996.48762 P49207 P49207 11 19 RPL34 60S ribosomal protein L34 yes yes 2 0.0090504 106.88 By MS/MS By matching 9.67 0.471 1 2 1 2 1345200 1269000 76155 9575 914 9900 23810;23811;23812 16780 16780 1 1348800 1612700 LTAATFTVMGLK QTVLTAALMFLVYEKLTAATFTVMGLKRAH YEKLTAATFTVMGLKRAHQH__________ K L T L K R 2 0 0 0 0 0 0 1 0 0 2 1 1 1 0 0 3 0 0 1 0 0 12 0 1251.6897 O43808 O43808 291 302 SLC25A17 Peroxisomal membrane protein PMP34 yes yes 2 0.0025743 112.3 By MS/MS 1.5 0.5 1 1 2 189820 189820 0 9576 224 9901 23813;23814 16781 16781 133 1 9314.9 0 LTADELWK HLMSQQYRPYSFFTKLTADELWKGALAETG PYSFFTKLTADELWKGALAETGAGAKKGRG K L T W K G 1 0 0 1 0 0 1 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 8 0 974.5073 P82675 P82675 93 100 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.008849 122.74 By MS/MS 7 0 1 1 4068500 4068500 0 9577 1205 9902 23815 16782 16782 1 72704 0 LTAPEDVFSK EPDTLEAAKKTMWERLTAPEDVFSKLQREN TMWERLTAPEDVFSKLQRENIAIIESYGAA R L T S K L 1 0 0 1 0 0 1 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 10 0 1105.5655 Q92621 Q92621 1452 1461 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.024787 89.029 By MS/MS 2 0.816 1 1 1 3 1332600 1332600 0 9578 2070 9903 23816;23817;23818 16783 16783 1 58017 0 LTAYAMTIPFVR DKKISPKRDKGLVEKLTAYAMTIPFVRQQV VEKLTAYAMTIPFVRQQVYKKVEEKVRKQT K L T V R Q 2 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 2 0 1 1 0 0 12 0 1381.7428 P40939 P40939 268 279 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00095502 128.81 By MS/MS 5 0 2 2 1702800 1702800 0 9579 835 9904;9905 23819;23820 16784;16785 16784 587 2 69994 0 LTDADAMK AIGQKRSTVAQLVKRLTDADAMKYTIVVSA VAQLVKRLTDADAMKYTIVVSATASDAAPL R L T M K Y 2 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 8 0 863.40587 P25705 P25705 263 270 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00959 114.5 By MS/MS 6 0 2 2 6727900 6727900 0 9580 687 9906;9907 23821;23822 16786;16787 16786 460 2 52465 0 LTDAQILTR IEPIQSRCAVLRYTKLTDAQILTRLMNVIE VLRYTKLTDAQILTRLMNVIEKERVPYTDD K L T T R L 1 1 0 1 0 1 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1029.5819 P35250 P35250 193 201 RFC2 Replication factor C subunit 2 yes yes 2 0.0009894 142.36 By MS/MS 7.5 0.5 1 1 2 10672000 10672000 0 9581 786 9908 23823;23824 16788;16789 16788 2 336550 0 LTDFGLCTGFR IKPDNILIDLDGHIKLTDFGLCTGFRWTHN GHIKLTDFGLCTGFRWTHNSKYYQKGSHVR K L T F R W 0 1 0 1 1 0 0 2 0 0 2 0 0 2 0 0 2 0 0 0 0 0 11 0 1285.6125 Q9NRM7;O95835 Q9NRM7 807 817 LATS2;LATS1 Serine/threonine-protein kinase LATS2;Serine/threonine-protein kinase LATS1 yes no 2 0.0026257 117.7 By MS/MS 3 0 1 1 223390 223390 0 9582 410 9909 23825 16790 16790 1 5831.6 0 LTDQLPLIIVCDR CYDPERVKNFLKEAKLTDQLPLIIVCDRFD AKLTDQLPLIIVCDRFDFVHDLVLYLYRNN K L T D R F 0 1 0 2 1 1 0 0 0 2 3 0 0 0 1 0 1 0 0 1 0 0 13 0 1554.844 Q00610;P53675 Q00610 768 780 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.018114 84.479 By MS/MS 3 0 1 1 122560 122560 0 9583 1235 9910 23826 16791;16792 16791 2 3199.5 0 LTEAKPVDKVK EDIPIAKERTHFTVRLTEAKPVDKVKLIKE FTVRLTEAKPVDKVKLIKEIKNYIQGINLV R L T V K L 1 0 0 1 0 0 1 0 0 0 1 3 0 0 1 0 1 0 0 2 0 0 11 2 1226.7234 P52815 P52815 134 144 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2;4 5.9699E-06 192.64 By MS/MS 9 0 2 2 1368500 1368500 0 9584 993 9911 23827;23828 16793;16794 16793 2 785410 0 LTEDEEGNAK QACILAVGRFRPVLKLTEDEEGNAKLQQRQ RPVLKLTEDEEGNAKLQQRQLITVTMSSDS K L T A K L 1 0 1 1 0 0 3 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1104.4935 O00330 O00330 451 460 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 2 0.042621 80.688 By MS/MS By matching 6 0 2 1 1 1752300 1721800 30450 9585 89 9912 23829;23830 16795 16795 1 13427 93387 LTEDGLPLGVNLGK VVEHRLRARQQKQAKLTEDGLPLGVNLGKN KLTEDGLPLGVNLGKNKTSVDAAEDYAEGV K L T G K N 0 0 1 1 0 0 1 3 0 0 4 1 0 0 1 0 1 0 0 1 0 0 14 0 1424.7875 Q02127 Q02127 170 183 DHODH Dihydroorotate dehydrogenase (quinone), mitochondrial yes yes 2 0.00031062 136.5 By MS/MS 7 0 1 1 327960 327960 0 9586 1250 9913 23831 16796 16796 1 5860.7 0 LTEDKADVQSIIGLQR EFAQDVGRMFKQFNKLTEDKADVQSIIGLQ TEDKADVQSIIGLQRFFETRMNEAFGDTKF K L T Q R F 1 1 0 2 0 2 1 1 0 2 2 1 0 0 0 1 1 0 0 1 0 0 16 1 1784.9632 Q13263 Q13263 775 790 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 5.942E-20 220.32 By MS/MS 4.2 0.748 1 2 2 5 11327000 11327000 0 9587 1351 9914 23832;23833;23834;23835;23836 16797;16798 16798 2 326710 0 LTEDKETLQYLQQNAK KNTRNLDPLVYLLSKLTEDKETLQYLQQNA TEDKETLQYLQQNAKERAELAAAAVGSSTT K L T A K E 1 0 1 1 0 3 2 0 0 0 3 2 0 0 0 0 2 0 1 0 0 0 16 1 1920.9793 Q9BSJ2 Q9BSJ2 88 103 TUBGCP2 Gamma-tubulin complex component 2 yes yes 3 1.0563E-07 160.46 By MS/MS 4 0 1 1 3443300 3443300 0 9588 2338 9915 23837 16799 16799 1 93997 0 LTEDLEYHELLDR PMPVNFNEPLSMLQRLTEDLEYHELLDRAA QRLTEDLEYHELLDRAAKCENSLEQLCYVA R L T D R A 0 1 0 2 0 0 3 0 1 0 4 0 0 0 0 0 1 0 1 0 0 0 13 0 1644.7995 P22059 P22059 450 462 OSBP Oxysterol-binding protein 1 yes yes 3 0.04431 62.891 By MS/MS 4.5 0.5 1 1 2 1841600 1841600 0 9589 654 9916 23838;23839 16800 16800 1 52408 0 LTEEFQNVR CKTWAGSQSRRLQRRLTEEFQNVRIIKPEA RRLQRRLTEEFQNVRIIKPEASRKESSEVY R L T V R I 0 1 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9 0 1134.5669 Q9UI43 Q9UI43 208 216 FTSJ2 rRNA methyltransferase 2, mitochondrial yes yes 2 2.7918E-06 185.72 By MS/MS 8.5 0.5 1 1 2 2787600 2787600 0 9590 2789 9917 23840;23841 16801 16801 1 919780 0 LTEELKEQMK WDEKAVDKLKEKKERLTEELKEQMKAKRKE EKKERLTEELKEQMKAKRKEAELRQVQSQA R L T M K A 0 0 0 0 0 1 3 0 0 0 2 2 1 0 0 0 1 0 0 0 0 0 10 1 1247.6431 Q14683 Q14683 681 690 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.0079634 120.27 By MS/MS 3.5 0.5 1 1 2 441740 441740 0 9591 1440 9918 23842;23843 16802 16802 1 11673 0 LTEGCSFR GCSTVLCQPTGGKARLTEGCSFRRKQH___ PTGGKARLTEGCSFRRKQH___________ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 P42677;Q71UM5 P42677 73 80 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 2 0.00024655 180.93 By MS/MS By matching 10 0 2 1 1 8453500 8335600 117870 9592 852;1755 9919 23844;23845 16803 16803 1 8859900 3023300 LTEGMSGR LAQFDYGRKCSEVARLTEGMSGREIAQLAV KCSEVARLTEGMSGREIAQLAVSWQATAYA R L T G R E 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 1 1 0 0 0 0 0 8 0 849.40145 Q5T9A4;Q9NVI7 Q9NVI7 569 576 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.017402 110.12 By MS/MS 5.5 0.5 1 1 2 1568000 1568000 0 9593 2655;1634 9920 23846;23847 16804 16804 1 29904 0 LTELLENDPSVR EALLGRSIQPEQVQRLTELLENDPSVRAIH VQRLTELLENDPSVRAIHDVKATDLGLGKV R L T V R A 0 1 1 1 0 0 2 0 0 0 3 0 0 0 1 1 1 0 0 1 0 0 12 0 1384.7198 Q6PML9 Q6PML9 462 473 SLC30A9 Zinc transporter 9 yes yes 2 3.8358E-11 206.49 By MS/MS 4 2.55 1 1 1 1 4 3834600 3834600 0 9594 1720 9921 23848;23849;23850;23851 16805;16806 16805 2 52562 0 LTEQKGEQQIQK QKELAAQLNEEAKRRLTEQKGEQQIQKARK KRRLTEQKGEQQIQKARKSNVSYKNPSLMP R L T Q K A 0 0 0 0 0 4 2 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 12 1 1428.7573 Q9Y5B9 Q9Y5B9 493 504 SUPT16H FACT complex subunit SPT16 yes yes 2;3 0.00062117 158.56 By MS/MS 2.5 1.12 2 2 2 2 8 2200000 2200000 0 9595 2968 9922 23852;23853;23854;23855;23856;23857;23858;23859 16807;16808 16808 2 83968 0 LTEQPELANK QGAHFLSRSLDDALKLTEQPELANKVDMVW DDALKLTEQPELANKVDMVWIVGGSSVYKE K L T N K V 1 0 1 0 0 1 2 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 10 0 1141.5979 P00374 P00374 100 109 DHFR Dihydrofolate reductase yes yes 2 0.0051751 106.88 By MS/MS 9 0 1 1 613910 613910 0 9596 426 9923 23860 16809 16809 1 352330 0 LTESLDFTDYASR APLPSRKAALETVDRLTESLDFTDYASRII DRLTESLDFTDYASRIIHPIVRTLDQSPEL R L T S R I 1 1 0 2 0 0 1 0 0 0 2 0 0 1 0 2 2 0 1 0 0 0 13 0 1516.7046 P42345 P42345 1142 1154 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.00034852 158.3 By MS/MS 2 0 1 1 147910 147910 0 9597 849 9924 23861 16810 16810 1 7351.7 0 LTESPCALVASQYGWSGNMER KALKDKIEKAVVSQRLTESPCALVASQYGW ALVASQYGWSGNMERIMKAQAYQTGKDIST R L T E R I 2 1 1 0 1 1 2 2 0 0 2 0 1 0 1 3 1 1 1 1 0 0 21 0 2355.0624 P14625 P14625 640 660 HSP90B1 Endoplasmin yes yes 2 3.3208E-19 189.33 By MS/MS 4 0 1 1 1114600 1114600 0 9598 589 9925 23862 16811 16811 379 1 30428 0 LTEVLTDSHVK APKQLSSCLPNIVPKLTEVLTDSHVKVQKA IVPKLTEVLTDSHVKVQKAGQQALRQIGSV K L T V K V 0 0 0 1 0 0 1 0 1 0 2 1 0 0 0 1 2 0 0 2 0 0 11 0 1240.6663 Q92616 Q92616 1543 1553 GCN1L1 Translational activator GCN1 yes yes 2;3 4.4496E-22 264.9 By MS/MS 2.2 0.748 1 2 2 5 4620100 4620100 0 9599 2068 9926 23863;23864;23865;23866;23867 16812;16813;16814 16813 3 189030 0 LTFDTTFSPNTGK GTEIAIEDQICQGLKLTFDTTFSPNTGKKS LKLTFDTTFSPNTGKKSGKIKSSYKRECIN K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 P45880 P45880 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 8.5854E-08 188.27 By MS/MS 8 0 1 1 2046500 2046500 0 9600 870 9927 23868 16815 16815 1 135010 0 LTFSCLGGSDNFK VEDSKDVNVNFEKSKLTFSCLGGSDNFKHL SKLTFSCLGGSDNFKHLNEIDLFHCIDPND K L T F K H 0 0 1 1 1 0 0 2 0 0 2 1 0 2 0 2 1 0 0 0 0 0 13 0 1444.6657 Q15185 Q15185 36 48 PTGES3 Prostaglandin E synthase 3 yes yes 2 7.5388E-12 205.52 By MS/MS 9 0 1 1 695120 695120 0 9601 1486 9928 23869 16816 16816 1 398930 0 LTGADGTPPGFLLK YTTTRLGIYTVLFERLTGADGTPPGFLLKA RLTGADGTPPGFLLKAVIGMTAGATGAFVG R L T L K A 1 0 0 1 0 0 0 3 0 0 3 1 0 1 2 0 2 0 0 0 0 0 14 0 1385.7555 Q02978 Q02978 109 122 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 4.8753E-12 256.48 By MS/MS 5.7 2.97 1 1 1 1 1 1 2 1 1 10 83715000 83715000 0 9602 1260 9929 23870;23871;23872;23873;23874;23875;23876;23877;23878;23879 16817;16818;16819;16820;16821;16822;16823;16824;16825 16822 9 6060100 0 LTGDVLQPPGTSVPIVK CKYDSRDIFPAGWCRLTGDVLQPPGTSVPI GDVLQPPGTSVPIVKNIAKTESSPSEASQH R L T V K N 0 0 0 1 0 1 0 2 0 1 2 1 0 0 3 1 2 0 0 3 0 0 17 0 1719.9771 Q9UQR0 Q9UQR0 232 248 SCML2 Sex comb on midleg-like protein 2 yes yes 2 0.00025671 129.34 By MS/MS 5 0 1 1 578250 578250 0 9603 2861 9930 23880 16826 16826 1 23768 0 LTGGKEITEK GDLRKAITFLQSATRLTGGKEITEKVITDI QSATRLTGGKEITEKVITDIAGVIPAEKID R L T E K V 0 0 0 0 0 0 2 2 0 1 1 2 0 0 0 0 2 0 0 0 0 0 10 1 1074.5921 P35249 P35249 251 260 RFC4 Replication factor C subunit 4 yes yes 2 0.006424 128.91 By MS/MS 7.5 0.5 1 1 2 1491900 1491900 0 9604 785 9931 23881;23882 16827 16827 1 39218 0 LTGMAFR AAKAVGKVIPELNGKLTGMAFRVPTANVSV VIPELNGKLTGMAFRVPTANVSVVDLTCRL K L T F R V 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 794.41089 P04406;O14556 P04406 228 234 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific yes no 2 0.01428 123.99 By MS/MS 7 0 1 1 8998900 8998900 0 9605 452 9932 23883 16828 16828 241 1 160810 0 LTGVFAPR HLKRVAAPKHWMLDKLTGVFAPRPSTGPHK KHWMLDKLTGVFAPRPSTGPHKLRECLPLI K L T P R P 1 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 1 0 0 8 0 859.49159 P62701;Q8TD47;P22090 P62701 23 30 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.021557 104.75 By MS/MS By matching 8.33 0.471 2 1 2 1 3970800 3936900 33898 9606 1140 9933 23884;23885;23886 16829 16829 1 373460 289190 LTHDDTGAR NQVTSVPELFLTAVKLTHDDTGARYLHLAR FLTAVKLTHDDTGARYLHLAREDTNNLFSV K L T A R Y 1 1 0 2 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 0 0 0 9 0 984.46247 Q5JRX3 Q5JRX3 67 75 PITRM1 Presequence protease, mitochondrial yes yes 2 0.02218 95.502 By MS/MS 4 0 1 1 309570 309570 0 9607 1606 9934 23887 16830 16830 1 8450.9 0 LTHDGAMQGTMAQQDDVTK L T T K 2 0 0 3 0 3 0 2 1 0 1 1 2 0 0 0 3 0 0 1 0 0 19 0 2045.9146 REV__Q9ULB1 yes yes 2 0.0099862 73.877 By MS/MS 7 0 1 1 644660 644660 0 + 9608 3050 9935 23888 16831 16831 1750 1 11520 0 LTHVDSPLEAPAGPLGQVK GPPHITSSAPELRQRLTHVDSPLEAPAGPL DSPLEAPAGPLGQVKLTLWYYSEERKLVSI R L T V K L 2 0 0 1 0 1 1 2 1 0 3 1 0 0 3 1 1 0 0 2 0 0 19 0 1928.0367 Q9BSJ8 Q9BSJ8 958 976 ESYT1 Extended synaptotagmin-1 yes yes 3 0.049895 54.292 By MS/MS 3.5 0.5 1 1 2 2028700 2028700 0 9609 2339 9936 23889;23890 16832 16832 1 53702 0 LTHVLTGK GCPRGSPVRCGQAVRLTHVLTGKNLHTHHF RCGQAVRLTHVLTGKNLHTHHFPSPLSNNQ R L T G K N 0 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 2 0 0 1 0 0 8 0 867.5178 Q9HCN8 Q9HCN8 106 113 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 0.02209 104.06 By MS/MS 9.5 0.5 1 1 2 1802800 1802800 0 9610 2563 9937 23891;23892 16833 16833 1 1068800 0 LTHYHEGLPTTR IRAPRKGWTLMHPGRLTHYHEGLPTTRGTR PGRLTHYHEGLPTTRGTRYIAVSFVDP___ R L T T R G 0 1 0 0 0 0 1 1 2 0 2 0 0 0 1 0 3 0 1 0 0 0 12 0 1423.7208 Q02809 Q02809 704 715 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 3 0.010894 96.604 By MS/MS 5.5 0.5 1 1 2 1957200 1957200 0 9611 1256 9938 23893;23894 16834 16834 1 38039 0 LTIAEER GNKPWISLPRGKGIRLTIAEERDKRLAAKQ LPRGKGIRLTIAEERDKRLAAKQSSG____ R L T E R D 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 830.44978 P62701;Q8TD47 P62701 246 252 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.039937 108.09 By matching By MS/MS 8 0 2 1 1 16195000 15986000 209140 9612 1140 9939 23895;23896 16835 16835 1 1054600 1784200 LTITSNPEMTFPGER GTDVGQTKAAQALAKLTITSNPEMTFPGER LTITSNPEMTFPGERIYEVVRPLVSLLHLN K L T E R I 0 1 1 0 0 0 2 1 0 1 1 0 1 1 2 1 3 0 0 0 0 0 15 0 1691.8189 Q9H3U1 Q9H3U1 715 729 UNC45A Protein unc-45 homolog A yes yes 2 3.7253E-06 152.96 By MS/MS 4 0 2 2 2116900 2116900 0 9613 2493 9940;9941 23897;23898 16836;16837 16836 1520 2 57789 0 LTLADIER DILYQLADLYNASGRLTLADIERIAPLAEG LYNASGRLTLADIERIAPLAEGALPYNLAE R L T E R I 1 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 929.5182 O75746 O75746 284 291 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.00079654 176.09 By MS/MS 6 0.816 1 1 1 3 6606500 6606500 0 9614 327 9942 23899;23900;23901 16838 16838 1 257670 0 LTLDKLDVK ______________________________ MSLSNKLTLDKLDVKGKRVVMRVDFNVPMK K L T V K G 0 0 0 2 0 0 0 0 0 0 3 2 0 0 0 0 1 0 0 1 0 0 9 1 1043.6227 P00558 P00558 7 15 PGK1 Phosphoglycerate kinase 1 yes yes 2;3 0.004642 118.71 By MS/MS 7 0 2 2 9505000 9505000 0 9615 432 9943 23902;23903 16839;16840 16840 2 169860 0 LTLDTIFVPNTGK GTEISWENKLAEGLKLTLDTIFVPNTGKKS LKLTLDTIFVPNTGKKSGKLKASYKRDCFS K L T G K K 0 0 1 1 0 0 0 1 0 1 2 1 0 1 1 0 3 0 0 1 0 0 13 0 1417.7817 Q9Y277 Q9Y277 97 109 VDAC3 Voltage-dependent anion-selective channel protein 3 yes yes 2 1.9218E-07 179.19 By MS/MS 8 0 1 1 552440 552440 0 9616 2873 9944 23904 16841 16841 1 36445 0 LTLIDPETLLPR AEEGTRNVVAECLGKLTLIDPETLLPRLKG LGKLTLIDPETLLPRLKGYLISGSSYARSS K L T P R L 0 1 0 1 0 0 1 0 0 1 4 0 0 0 2 0 2 0 0 0 0 0 12 0 1379.8024 Q86VP6 Q86VP6 958 969 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 7.5851E-05 160.36 By MS/MS 4.5 1.12 1 1 1 1 4 2216500 2216500 0 9617 1829 9945 23905;23906;23907;23908 16842;16843;16844 16844 3 58100 0 LTLISEDIK QKEEKEMIFEDTNLKLTLISEDIKSYYTVR EDTNLKLTLISEDIKSYYTVRQLELENLTT K L T I K S 0 0 0 1 0 0 1 0 0 2 2 1 0 0 0 1 1 0 0 0 0 0 9 0 1030.591 P18031 P18031 142 150 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.0013205 137.13 By MS/MS 7 0.816 1 1 1 3 14632000 14632000 0 9618 620 9946 23909;23910;23911 16845;16846 16845 2 156290 0 LTLLHYDPVVK TGFCFNTKRNRLREKLTLLHYDPVVKQRVL LREKLTLLHYDPVVKQRVLFVEKKKIRSL_ K L T V K Q 0 0 0 1 0 0 0 0 1 0 3 1 0 0 1 0 1 0 1 2 0 0 11 0 1296.7442 O75394 O75394 41 51 MRPL33 39S ribosomal protein L33, mitochondrial yes yes 2 0.0058416 104.2 By MS/MS 10 0 1 1 115420 115420 0 9619 303 9947 23912 16847 16847 1 122680 0 LTLLNPK AYIADLDAKSGASLKLTLLNPKGRIWTMVA AKSGASLKLTLLNPKGRIWTMVAGGGASVV K L T P K G 0 0 1 0 0 0 0 0 0 0 3 1 0 0 1 0 1 0 0 0 0 0 7 0 797.50109 P53396 P53396 266 272 ACLY ATP-citrate synthase yes yes 2 0.040889 107.43 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 16408000 16408000 0 9620 1001 9948 23913;23914;23915;23916;23917;23918 16848 16848 1 431500 0 LTLLQVASR QNQQLLRENEIIKQKLTLLQVASRQKHLPK EIIKQKLTLLQVASRQKHLPKDTLLSPDSS K L T S R Q 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 999.60768 O95239 O95239 994 1002 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.00034533 156.83 By MS/MS 3 0 1 1 488830 488830 0 9621 378 9949 23919 16849 16849 1 12761 0 LTLNDSSVTVHR LDQSEYNNLKSAIEKLTLNDSSVTVHRDSS IEKLTLNDSSVTVHRDSSLALGAGWRLGFL K L T H R D 0 1 1 1 0 0 0 0 1 0 2 0 0 0 0 2 2 0 0 2 0 0 12 0 1340.7048 Q8N442 Q8N442 379 390 GUF1 Translation factor GUF1, mitochondrial yes yes 3 0.0048583 98.182 By MS/MS 5 0 1 1 1166600 1166600 0 9622 1913 9950 23920 16850 16850 1 47953 0 LTLSALLDGK LIGLGYTQTLKPGIKLTLSALLDGKNVNAG KPGIKLTLSALLDGKNVNAGGHKLGLGLEF K L T G K N 1 0 0 1 0 0 0 1 0 0 4 1 0 0 0 1 1 0 0 0 0 0 10 0 1029.607 P21796 P21796 257 266 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 9.6016E-05 166.09 By MS/MS 8 0 2 2 879910 879910 0 9623 650 9951 23921;23922 16851;16852 16851 2 58048 0 LTLSALVDGK LIGVGYTQTLRPGVKLTLSALVDGKSINAG RPGVKLTLSALVDGKSINAGGHKVGLALEL K L T G K S 1 0 0 1 0 0 0 1 0 0 3 1 0 0 0 1 1 0 0 1 0 0 10 0 1015.5914 P45880 P45880 268 277 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 6.9469E-07 186.78 By MS/MS 8 0 2 2 5297500 5297500 0 9624 870 9952 23923;23924 16853;16854 16854 2 349470 0 LTLSQFQK QVCFDDDGTSSPQDRLTLSQFQKQLLEDYG TSSPQDRLTLSQFQKQLLEDYGESHFTVNQ R L T Q K Q 0 0 0 0 0 2 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 8 0 963.53893 Q8N1F7 Q8N1F7 435 442 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.011454 107.01 By MS/MS 4.5 0.5 1 1 2 2287700 2287700 0 9625 1898 9953 23925;23926 16855 16855 1 84628 0 LTLTSDESTLIEDGGAR FYSSIRTSNNSQVNKLTLTSDESTLIEDGG LTSDESTLIEDGGARSDGSLEDGDDVHRAV K L T A R S 1 1 0 2 0 0 2 2 0 1 3 0 0 0 0 2 3 0 0 0 0 0 17 0 1776.8741 Q9NRX5 Q9NRX5 344 360 SERINC1 Serine incorporator 1 yes yes 2 2.9166E-26 232.6 By MS/MS 9 0 1 1 537670 537670 0 9626 2616 9954 23927 16856 16856 1 308570 0 LTNAGYDYLALK KLIAWERTKTVQGYRLTNAGYDYLALKTLS GYRLTNAGYDYLALKTLSSRQVVESVGNQM R L T L K T 2 0 1 1 0 0 0 1 0 0 3 1 0 0 0 0 1 0 2 0 0 0 12 0 1340.6976 Q9BVS4 Q9BVS4 75 86 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 2 0.00024683 150.46 By MS/MS 5 0 1 1 594390 594390 0 9627 2383 9955 23928 16857 16857 1 24432 0 LTNVAVVR ______________________________ TPTNQIRLTNVAVVRMKRAGKRFEIACYKN R L T V R M 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 3 0 0 8 0 870.5287 Q9Y3A5 Q9Y3A5 12 19 SBDS Ribosome maturation protein SBDS yes yes 2 0.00029482 188.98 By MS/MS 8 0 1 1 7421200 7421200 0 9628 2922 9956 23929 16858 16858 1 489580 0 LTPEEEEILNK ESHYALPLGRKKGAKLTPEEEEILNKKRSK KGAKLTPEEEEILNKKRSKKIQKKYDERKK K L T N K K 0 0 1 0 0 0 4 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1313.6715 P62241 P62241 129 139 RPS8 40S ribosomal protein S8 yes yes 2 0.0057884 104.42 By MS/MS By matching 8.4 1.02 1 2 1 1 3 2 27706000 27470000 235870 9629 1118 9957 23930;23931;23932;23933;23934 16859;16860 16860 2 3882300 1886200 LTPEEEEILNKKR ESHYALPLGRKKGAKLTPEEEEILNKKRSK AKLTPEEEEILNKKRSKKIQKKYDERKKNA K L T K R S 0 1 1 0 0 0 4 0 0 1 2 2 0 0 1 0 1 0 0 0 0 0 13 2 1597.8675 P62241 P62241 129 141 RPS8 40S ribosomal protein S8 yes yes 2;4 0.013271 120.77 By MS/MS By matching 8.67 0.745 3 2 1 5 1 8691500 8627300 64146 9630 1118 9958 23935;23936;23937;23938;23939;23940 16861;16862 16861 2 1139800 547240 LTPEYLQLMK ECYTAMKIAEANKLKLTPEYLQLMKYKAIA ANKLKLTPEYLQLMKYKAIASNSKIYFGKD K L T M K Y 0 0 0 0 0 1 1 0 0 0 3 1 1 0 1 0 1 0 1 0 0 0 10 0 1234.6631 O94905 O94905 276 285 ERLIN2 Erlin-2 yes yes 2 0.019804 86.136 By MS/MS By matching 7.33 0.471 2 1 2 1 2783700 2770500 13176 9631 357 9959 23941;23942;23943 16863 16863 190 1 63982 54088 LTPITYPQGLAMAK LRDDKDTIEKLKEKKLTPITYPQGLAMAKE KLTPITYPQGLAMAKEIGAVKYLECSALTQ K L T A K E 2 0 0 0 0 1 0 1 0 1 2 1 1 0 2 0 2 0 1 0 0 0 14 0 1502.8167 P63000 P63000 134 147 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 2 0.00042728 130.56 By MS/MS 9.5 0.5 1 1 2 1282300 1282300 0 9632 1166 9960 23944;23945 16864 16864 908 1 758250 0 LTPLPEDNSMNVDQDGDPSDR IITNRCFFLSKIEEKLTPLPEDNSMNVDQD DNSMNVDQDGDPSDRMEVQEQEEDISSLIR K L T D R M 0 1 2 5 0 1 1 1 0 0 2 0 1 0 3 2 1 0 0 1 0 0 21 0 2314.0019 P78527 P78527 3197 3217 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.1286E-05 126.88 By MS/MS 1.5 0.5 1 1 2 835070 835070 0 9633 1197 9961 23946;23947 16865 16865 1 41046 0 LTPLQLEIQR QKSQLQRLLQELRRRLTPLQLEIQRVVEKA ELRRRLTPLQLEIQRVVEKADSWVEKEEPA R L T Q R V 0 1 0 0 0 2 1 0 0 1 3 0 0 0 1 0 1 0 0 0 0 0 10 0 1209.7081 Q8N163 Q8N163 896 905 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 0.00064141 139.43 By MS/MS 4 0.816 1 1 1 3 3370200 3370200 0 9634 1895 9962 23948;23949;23950 16866 16866 1 89477 0 LTPQMFNQLMK KTQELFRKVRSILNKLTPQMFNQLMKQVSG ILNKLTPQMFNQLMKQVSGLTVDTEERLKG K L T M K Q 0 0 1 0 0 2 0 0 0 0 2 1 2 1 1 0 1 0 0 0 0 0 11 0 1349.6836 O43432 O43432 765 775 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.017596 70.552 By MS/MS 2 0 1 1 405610 405610 0 9635 200 9963 23951 16867 16867 113;114 1 20161 0 LTPQMFQQLMK KTQDLFRRVRSILNKLTPQMFQQLMKQVTQ ILNKLTPQMFQQLMKQVTQLAIDTEERLKG K L T M K Q 0 0 0 0 0 3 0 0 0 0 2 1 2 1 1 0 1 0 0 0 0 0 11 0 1363.6992 Q04637 Q04637 771 781 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 4.0855E-05 156.16 By MS/MS 1.83 0.687 2 3 1 6 21890000 21890000 0 9636 1264 9964;9965 23952;23953;23954;23955;23956;23957 16868;16869;16870;16871;16872;16873 16870 1025;1026 6 1061300 0 LTQDAVAK YLVMLKAIRILVQERLTQDAVAKANQTKEG RILVQERLTQDAVAKANQTKEGLPVALDKH R L T A K A 2 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 844.46543 Q9Y224 Q9Y224 164 171 C14orf166 UPF0568 protein C14orf166 yes yes 2 0.0013486 167.23 By MS/MS By matching 7.67 0.471 1 2 1 2 1884600 1701500 183090 9637 2863 9966 23958;23959;23960 16874 16874 1 112250 1234200 LTQDEIISK NMSTMVYIKEDKLEKLTQDEIISKTKQVIQ EDKLEKLTQDEIISKTKQVIQGLEALKNEH K L T S K T 0 0 0 1 0 1 1 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 9 0 1045.5655 Q07866 Q07866 19 27 KLC1 Kinesin light chain 1 yes yes 2 0.0087871 107.45 By MS/MS 5 0 1 1 907790 907790 0 9638 1284 9967 23961 16875 16875 1 37314 0 LTQDQDVDVK DNSTLQSEVKPILEKLTQDQDVDVKYFAQE PILEKLTQDQDVDVKYFAQEALTVLSLA__ K L T V K Y 0 0 0 3 0 2 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1159.5721 P30153 P30153 567 576 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 2.0424E-10 198.61 By MS/MS 6 0 1 1 3560900 3560900 0 9639 737 9968 23962 16876 16876 1 27768 0 LTQEETNFK QTEQELKEKEKELQKLTQEETNFKSLVHDL EKELQKLTQEETNFKSLVHDLFQKVEEAKS K L T F K S 0 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 9 0 1108.5401 Q9NTJ3 Q9NTJ3 565 573 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0019963 129.85 By MS/MS 2 0.816 1 1 1 3 2623600 2623600 0 9640 2630 9969 23963;23964;23965 16877 16877 1 74060 0 LTQEQVSDSQVLIR MIRHYVSILLQSDKKLTQEQVSDSQVLIRS KLTQEQVSDSQVLIRSRVLRENGKYIPKQS K L T I R S 0 1 0 1 0 3 1 0 0 1 2 0 0 0 0 2 1 0 0 2 0 0 14 0 1614.8577 Q9P0I2 Q9P0I2 44 57 EMC3 ER membrane protein complex subunit 3 yes yes 2;3 3.3335E-35 322.07 By MS/MS 8 0 2 2 4673700 4673700 0 9641 2725 9970 23966;23967 16878;16879 16878 2 308320 0 LTQGETLR YLFGWMVPPKISLLKLTQGETLRKLYEQHH PKISLLKLTQGETLRKLYEQHHVVQDMLVP K L T L R K 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 8 0 916.49779 Q15392 Q15392 368 375 DHCR24 Delta(24)-sterol reductase yes yes 2 0.0019241 146.79 By MS/MS 3.2 1.72 1 1 1 1 1 5 13600000 13600000 0 9642 1497 9971 23968;23969;23970;23971;23972 16880;16881 16880 2 307780 0 LTQGIGR DHSSLTLGSGSSTTRLTQGIGRSQRTLRQL GSGSSTTRLTQGIGRSQRTLRQLTANTGHT R L T G R S 0 1 0 0 0 1 0 2 0 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 743.42899 Q7Z6Z7 Q7Z6Z7 2539 2545 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.044771 104.75 By MS/MS 1.5 0.5 1 1 2 712430 712430 0 9643 1803 9972 23973;23974 16882 16882 1 34874 0 LTQNADCVVVLDNTALNR DVVVQPYNSLLTLKRLTQNADCVVVLDNTA NADCVVVLDNTALNRIATDRLHIQNPSFSQ R L T N R I 2 1 3 2 1 1 0 0 0 0 3 0 0 0 0 0 2 0 0 3 0 0 18 0 2015.0106 P23258;Q9NRH3 P23258 195 212 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 1.4419E-43 257.81 By MS/MS 7 0.816 1 1 1 3 6881100 6881100 0 9644 666 9973 23975;23976;23977 16883;16884 16883 2 99704 0 LTRDETNYGIPQR MILSASRDKTIIMWKLTRDETNYGIPQRAL WKLTRDETNYGIPQRALRGHSHFVSDVVIS K L T Q R A 0 2 1 1 0 1 1 1 0 1 1 0 0 0 1 0 2 0 1 0 0 0 13 1 1561.7849 P63244 P63244 45 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.027918 110.08 By MS/MS 8 0 1 1 1663900 1663900 0 9645 1178 9974 23978 16885 16885 1 109770 0 LTSAVSSLPELLEK EDEGAISMLSDNTAKLTSAVSSLPELLEKK KLTSAVSSLPELLEKKRLIDLHTNVATAVL K L T E K K 1 0 0 0 0 0 2 0 0 0 4 1 0 0 1 3 1 0 0 1 0 0 14 0 1485.829 Q8WVM8 Q8WVM8 382 395 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 4.2342E-05 188.96 By MS/MS 6 0.816 1 1 1 3 5078500 5078500 0 9646 2033 9975 23979;23980;23981 16886 16886 1 174710 0 LTSDDVKEQIYK QSALPYRRSVPTWLKLTSDDVKEQIYKLAK WLKLTSDDVKEQIYKLAKKGLTPSQIGVIL K L T Y K L 0 0 0 2 0 1 1 0 0 1 1 2 0 0 0 1 1 0 1 1 0 0 12 1 1437.7351 P62277 P62277 28 39 RPS13 40S ribosomal protein S13 yes yes 2 2.1268E-32 265.36 By MS/MS 9.5 0.5 1 1 2 3934900 3934900 0 9647 1126 9976 23982;23983 16887;16888 16887 2 3322000 0 LTSDSTVYDYAGK VSTEAPPIIFATPTKLTSDSTVYDYAGKNK TKLTSDSTVYDYAGKNKVPELQKFFQKADG K L T G K N 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 2 2 0 2 1 0 0 13 0 1418.6565 O14548 O14548 45 57 COX7A2L Cytochrome c oxidase subunit 7A-related protein, mitochondrial yes yes 2 1.05E-11 202.03 By MS/MS 10 0 1 1 1429800 1429800 0 9648 114 9977 23984 16889 16889 1 1519700 0 LTSEPQPQR ESGVQHKPSAPQGGRLTSEPQPQREGCGC_ APQGGRLTSEPQPQREGCGC__________ R L T Q R E 0 1 0 0 0 2 1 0 0 0 1 0 0 0 2 1 1 0 0 0 0 0 9 0 1054.5407 P61106 P61106 202 210 RAB14 Ras-related protein Rab-14 yes yes 2 0.00046591 154.12 By MS/MS 9 0 1 1 242750 242750 0 9649 1088 9978 23985 16890 16890 1 139310 0 LTSFIGAIAIGDLVK IFKAGADEERAETARLTSFIGAIAIGDLVK LTSFIGAIAIGDLVKSTLGPKGMDKILLSS R L T V K S 2 0 0 1 0 0 0 2 0 3 2 1 0 1 0 1 1 0 0 1 0 0 15 0 1516.8865 P78371 P78371 26 40 CCT2 T-complex protein 1 subunit beta yes yes 2;3 1.7997E-08 198.57 By MS/MS 6 0 2 2 32298000 32298000 0 9650 1195 9979 23986;23987 16891;16892 16891 2 251860 0 LTSFITVFK KKSAKGMTENEVEDRLTSFITVFKYIDDKD NEVEDRLTSFITVFKYIDDKDVFQKFYARM R L T F K Y 0 0 0 0 0 0 0 0 0 1 1 1 0 2 0 1 2 0 0 1 0 0 9 0 1054.6063 Q13617 Q13617 415 423 CUL2 Cullin-2 yes yes 2 0.0068242 111.74 By MS/MS 5 0 1 1 96229 96229 0 9651 1388 9980 23988 16893 16893 1 3955.4 0 LTSLNEEYTK TVDIQKNGVKFTNSKLTSLNEEYTKNKTEY FTNSKLTSLNEEYTKNKTEYEEAQDAIVKE K L T T K N 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 1 2 0 1 0 0 0 10 0 1196.5925 P43246 P43246 556 565 MSH2 DNA mismatch repair protein Msh2 yes yes 2 7.5465E-30 270.06 By MS/MS 4 0 1 1 2731200 2731200 0 9652 862 9981 23989 16894 16894 1 74558 0 LTSLVPFVDAFQLER LQQVSQIYQSIEFSRLTSLVPFVDAFQLER LTSLVPFVDAFQLERAIVDAARHCDLQVRI R L T E R A 1 1 0 1 0 1 1 0 0 0 3 0 0 2 1 1 1 0 0 2 0 0 15 0 1733.9352 Q14152 Q14152 455 469 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00048645 124.12 By MS/MS 6 0 1 1 1375400 1375400 0 9653 1409 9982 23990 16895 16895 1 10725 0 LTSSLTTK RYEDFSNLGTTHLLRLTSSLTTKGASSFKI GTTHLLRLTSSLTTKGASSFKITRGIEAVG R L T T K G 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 2 3 0 0 0 0 0 8 0 849.48075 P22695 P22695 85 92 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.013332 116.25 By MS/MS 7 0 1 1 0 0 0 9654 662 9983 23991 16896 16896 1 0 0 LTTDPDLILEVLR FIPIWTVANMEEIKKLTTDPDLILEVLRSS KKLTTDPDLILEVLRSSPMVQVDEKGEKVR K L T L R S 0 1 0 2 0 0 1 0 0 1 4 0 0 0 1 0 2 0 0 1 0 0 13 0 1496.845 Q71RC2 Q71RC2 166 178 LARP4 La-related protein 4 yes yes 2 0.00077067 134.2 By MS/MS 5 0.816 1 1 1 3 1748600 1748600 0 9655 1752 9984 23992;23993;23994 16897;16898;16899 16899 3 39979 0 LTTPTYGDLNHLVSATMSGVTTCLR IDNEALYDICFRTLKLTTPTYGDLNHLVSA HLVSATMSGVTTCLRFPGQLNADLRKLAVN K L T L R F 1 1 1 1 1 0 0 2 1 0 4 0 1 0 1 2 6 0 1 2 0 0 25 0 2707.3309 P07437;P68371;Q13885;Q9BVA1;P04350 P68371 217 241 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 3 0.00065636 75.945 By MS/MS 6 0 3 3 19764000 19764000 0 9656 1187;490;1400;2375;451 9985;9986 23995;23996;23997 16900;16901;16902;16903 16901 237 4 154120 0 LTVADALEPVQFEDGQK LSKVSILESLDKWERLTVADALEPVQFEDG VADALEPVQFEDGQKIVVQGEPGDEFFIIL R L T Q K I 2 0 0 2 0 2 2 1 0 0 2 1 0 1 1 0 1 0 0 2 0 0 17 0 1858.9313 P10644 P10644 265 281 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 3.6857E-43 252.37 By MS/MS 6.5 0.5 1 1 2 13744000 13744000 0 9657 542 9987 23998;23999 16904;16905 16904 2 113940 0 LTVAENEAETK KSCQFVAVRRDTGEKLTVAENEAETKLQAI TGEKLTVAENEAETKLQAILEDIQVTLFTR K L T T K L 2 0 1 0 0 0 3 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 11 0 1203.5983 P07814 P07814 1390 1400 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 8.7512E-05 192.44 By MS/MS By matching 4.2 1.17 2 1 1 1 4 1 4241000 4218900 22176 9658 493 9988 24000;24001;24002;24003;24004 16906 16906 1 100110 31783 LTVDDFEFR DQDLVVRIETATTLKLTVDDFEFRTDQFLP TATTLKLTVDDFEFRTDQFLPYLETMFTLL K L T F R T 0 1 0 2 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 9 0 1140.5451 Q9UI26 Q9UI26 541 549 IPO11 Importin-11 yes yes 2 0.00021473 163.15 By MS/MS 4 0 1 1 1401000 1401000 0 9659 2787 9989 24005 16907 16907 1 38247 0 LTVEDPVTVEYITR RIVINRARVECQSHRLTVEDPVTVEYITRY RLTVEDPVTVEYITRYIASLKQRYTQSNGR R L T T R Y 0 1 0 1 0 0 2 0 0 1 1 0 0 0 1 0 3 0 1 3 0 0 14 0 1633.8563 O14818;Q8TAA3 O14818 96 109 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 2 5.216E-08 193.22 By MS/MS 9 1 1 1 2 10416000 10416000 0 9660 129 9990 24006;24007 16908;16909 16908 2 818840 0 LTVLLPLAAAER RVEILPVPYVTEASRLTVLLPLAAAERDLA ASRLTVLLPLAAAERDLAPGFLEAFATAAL R L T E R D 3 1 0 0 0 0 1 0 0 0 4 0 0 0 1 0 1 0 0 1 0 0 12 0 1265.7707 Q8IZ52 Q8IZ52 508 519 CHPF Chondroitin sulfate synthase 2 yes yes 2 0.0026715 117.71 By MS/MS 4.5 0.5 1 1 2 700880 700880 0 9661 1884 9991 24008;24009 16910 16910 1 21115 0 LTVNDFVR LLPQLLGVAPEKAIKLTVNDFVRDKFMHKD APEKAIKLTVNDFVRDKFMHKDGSVPLAAE K L T V R D 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 962.51853 Q9UJS0;O75746 Q9UJS0 409 416 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 0.0010804 171.53 By MS/MS 4.57 2.44 1 1 1 1 1 1 1 7 50431000 50431000 0 9662 2798;327 9992 24010;24011;24012;24013;24014;24015;24016 16911;16912;16913;16914;16915 16915 5 1960900 0 LTVSQGNTSVQQDK SPPSRPRNELNVFNRLTVSQGNTSVQQDKS RLTVSQGNTSVQQDKSDESDSSLSEVHRSS R L T D K S 0 0 1 1 0 3 0 1 0 0 1 1 0 0 0 2 2 0 0 2 0 0 14 0 1503.7529 Q7Z4S6 Q7Z4S6 1290 1303 KIF21A Kinesin-like protein KIF21A yes yes 2 4.3219E-12 202.61 By MS/MS 2 0 1 1 185750 185750 0 9663 1797 9993 24017 16916 16916 1 9232.6 0 LTVSSLQESGLK PFVVPVASPSGDARRLTVSSLQESGLKVNQ ARRLTVSSLQESGLKVNQPASFAVSLNGAK R L T L K V 0 0 0 0 0 1 1 1 0 0 3 1 0 0 0 3 1 0 0 1 0 0 12 0 1260.6925 P21333 P21333 2335 2346 FLNA Filamin-A yes yes 2 0.0049222 121.29 By MS/MS 2.5 0.5 1 1 2 643650 643650 0 9664 648 9994 24018;24019 16917 16917 1 24588 0 LTVVAQK LTKHLFAILGGSEGKLTVVAQKMSVLSGIG ILGGSEGKLTVVAQKMSVLSGIGSVSHHVV K L T Q K M 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 7 0 757.46979 Q92616 Q92616 353 359 GCN1L1 Translational activator GCN1 yes yes 2 0.017424 133.47 By MS/MS 3 0.816 1 1 1 3 1616200 1616200 0 9665 2068 9995 24020;24021;24022 16918 16918 1 70163 0 LTVVDTPGYGDAINCR EASTVEIEERGVKLRLTVVDTPGYGDAINC TVVDTPGYGDAINCRDCFKTIISYIDEQFE R L T C R D 1 1 1 2 1 0 0 2 0 1 1 0 0 0 1 0 2 0 1 2 0 0 16 0 1749.8356 Q15019 Q15019 97 112 SEPT2 Septin-2 yes yes 2 2.3983E-63 297.18 By MS/MS 7 0 1 1 3236300 3236300 0 9666 1462 9996 24023 16919 16919 1 57833 0 LTWHSCPEDEAQ NMKCPQIVIAFYEERLTWHSCPEDEAQ___ EERLTWHSCPEDEAQ_______________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 0.00033102 154.84 By MS/MS 9 0 1 1 1604800 1604800 0 9667 1344 9997 24024 16920 16920 1 921000 0 LTWLQNMAGK MYRIAKGYQTSPDLRLTWLQNMAGKHSERS SPDLRLTWLQNMAGKHSERSNHAEAAQCLV R L T G K H 1 0 1 0 0 1 0 1 0 0 2 1 1 0 0 0 1 1 0 0 0 0 10 0 1160.6012 Q96N67;Q96HP0 Q96N67 1688 1697 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 no no 2 9.7545E-05 160.82 By MS/MS 2.5 1.12 1 1 1 1 4 897850 897850 0 9668 2230;2193 9998 24025;24026;24027;24028 16921 16921 1400 1 31970 0 LTYQDAVNLQNYVEEK KYNHLVYSQIPAAVKLTYQDAVNLQNYVEE TYQDAVNLQNYVEEKLIPTWNWMVSIMDST K L T E K L 1 0 2 1 0 2 2 0 0 0 2 1 0 0 0 0 1 0 2 2 0 0 16 0 1925.9371 O95071 O95071 1819 1834 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 6.3333E-21 223.06 By MS/MS 2.5 0.5 1 1 2 596010 596010 0 9669 364 9999 24029;24030 16922 16922 1 23696 0 LVAAEQQK ______________________________ DEAELQRLVAAEQQKAQFTAQVHHFMELCW R L V Q K A 2 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 885.49198 Q9Y5J9 Q9Y5J9 15 22 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 0.0059394 133.6 By MS/MS 10 0 1 1 877620 877620 0 9670 2970 10000 24031 16923 16923 1 932820 0 LVAAFGELR LRQYGPNVPEPILQKLVAAFGELRSLADQG EPILQKLVAAFGELRSLADQGIINYPYSTR K L V L R S 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 974.55492 A3KMH1 A3KMH1 955 963 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0021045 128.69 By MS/MS 3 1.41 1 1 1 1 1 5 2330100 2330100 0 9671 13 10001 24032;24033;24034;24035;24036 16924;16925;16926;16927 16924 4 83780 0 LVAFPTR PVAVVPSKWITPLDRLVAFPTRVAGGVGIT KWITPLDRLVAFPTRVAGGVGITCWILVCN R L V T R V 1 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 7 0 802.47012 O00258 O00258 142 148 WRB Tail-anchored protein insertion receptor WRB yes yes 2 0.019537 127.66 By MS/MS 9 0 1 1 813490 813490 0 9672 84 10002 24037 16928 16928 1 466870 0 LVAGEMGQNEPDQGGQR RVLDVNLMGTFNVIRLVAGEMGQNEPDQGG AGEMGQNEPDQGGQRGVIINTASVAAFEGQ R L V Q R G 1 1 1 1 0 3 2 4 0 0 1 0 1 0 1 0 0 0 0 1 0 0 17 0 1784.8112 Q99714 Q99714 131 147 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 2.2303E-19 248.67 By MS/MS 8.5 0.5 2 2 4 1884200 1884200 0 9673 2285 10003;10004 24038;24039;24040;24041 16929;16930;16931 16930 1436 3 383110 0 LVAIVDVIDQNR VGRVAYVSFGPHAGKLVAIVDVIDQNRALV AGKLVAIVDVIDQNRALVDGPCTQVRRQAM K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914 P50914 24 35 RPL14 60S ribosomal protein L14 yes yes 2 6.1976E-11 201.61 By MS/MS By matching 8 0 2 1 1 2088700 1989400 99333 9674 954 10005 24042;24043 16932 16932 1 131240 847430 LVALNLDR QLGSYDPLPNSHGEKLVALNLDRIRHWIGC PNSHGEKLVALNLDRIRHWIGCGAHLSKPM K L V D R I 1 1 1 1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 912.53927 Q9Y3D3 Q9Y3D3 65 72 MRPS16 28S ribosomal protein S16, mitochondrial yes yes 2 0.011454 131.03 By MS/MS 10 0 1 1 8824600 8824600 0 9675 2930 10006 24044 16933 16933 1 9379600 0 LVANNEVCVK QMKPTYLTRHVKPERLVANNEVCVKLVADA VKPERLVANNEVCVKLVADAVERHALRAEN R L V V K L 1 0 2 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 10 0 1144.591 Q9NVR0 Q9NVR0 311 320 KLHL11 Kelch-like protein 11 yes yes 2 0.006195 103.55 By MS/MS 3.5 1.12 1 1 1 1 4 1351200 1351200 0 9676 2659 10007 24045;24046;24047;24048 16934 16934 1 51594 0 LVAQLYK REFALKHLPNDPMFKLVAQLYKIVPNVLLE LPNDPMFKLVAQLYKIVPNVLLEQGKAKNP K L V Y K I 1 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 7 0 833.50109 O75390 O75390 376 382 CS Citrate synthase, mitochondrial yes yes 2 0.053606 100.27 By MS/MS 7 0 1 1 4341200 4341200 0 9677 302 10008 24049 16935 16935 1 77578 0 LVATAVK TGTVCHVGKAEDRERLVATAVKLHGGIDIL GKAEDRERLVATAVKLHGGIDILVSNAAVN R L V V K L 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 7 0 700.44833 Q9BTZ2 Q9BTZ2 99 105 DHRS4 Dehydrogenase/reductase SDR family member 4 yes yes 2 0.042356 106.42 By MS/MS 8 0 1 1 2521500 2521500 0 9678 2358 10009 24050 16936 16936 1 166340 0 LVAVLQGK PLPQRHVDTGMGLERLVAVLQGKHSTYDTD TGMGLERLVAVLQGKHSTYDTDLFSPLLNA R L V G K H 1 0 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 8 0 826.52764 Q5JTZ9 Q5JTZ9 273 280 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.017021 110.61 By MS/MS 5 0.816 1 1 1 3 6780700 6780700 0 9679 1611 10010 24051;24052;24053 16937 16937 1 193040 0 LVDCIIEVHDAR GHMAKGLKKMQSSLKLVDCIIEVHDARIPL SLKLVDCIIEVHDARIPLSGRNPLFQETLG K L V A R I 1 1 0 2 1 0 1 0 1 2 1 0 0 0 0 0 0 0 0 2 0 0 12 0 1438.7238 Q9BT17 Q9BT17 48 59 MTG1 Mitochondrial ribosome-associated GTPase 1 yes yes 3 0.019255 78.903 By MS/MS 8 0 1 1 1157800 1157800 0 9680 2343 10011 24054 16938 16938 1 76379 0 LVDEEPQLTK WPGDILAYKEHLKSKLVDEEPQLTKRTHNV HLKSKLVDEEPQLTKRTHNV__________ K L V T K R 0 0 0 1 0 1 2 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 10 0 1170.6132 Q9UG63 Q9UG63 609 618 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.0043923 109.44 By MS/MS By matching 5.75 0.829 2 1 1 3 1 5842000 5823500 18579 9681 2771 10012 24055;24056;24057;24058 16939 16939 1 132110 54974 LVDEEPQLTKR WPGDILAYKEHLKSKLVDEEPQLTKRTHNV LKSKLVDEEPQLTKRTHNV___________ K L V K R T 0 1 0 1 0 1 2 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 11 1 1326.7143 Q9UG63 Q9UG63 609 619 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.0016992 137.46 By MS/MS 5 0 1 1 1146600 1146600 0 9682 2771 10013 24059 16940 16940 1 47130 0 LVDEYSLNAGK GDNGCLDDIRTHYDRLVDEYSLNAGKQRYE HYDRLVDEYSLNAGKQRYEKMISGMYLGEI R L V G K Q 1 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1207.6085 P19367 P19367 728 738 HK1 Hexokinase-1 yes yes 2 1.0514E-06 177.06 By MS/MS 4.5 0.5 1 1 2 8142800 8142800 0 9683 630 10014 24060;24061 16941 16941 1 229710 0 LVDPVAGSGGPGSR GDEEDEDEIIVPKKKLVDPVAGSGGPGSRF KLVDPVAGSGGPGSRFKGKHSLDSDEEEDD K L V S R F 1 1 0 1 0 0 0 4 0 0 1 0 0 0 2 2 0 0 0 2 0 0 14 0 1267.6521 O95400 O95400 27 40 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2 0.00038266 145.09 By MS/MS 5.5 0.5 1 1 2 3880000 3880000 0 9684 391 10015 24062;24063 16942 16942 1 34207 0 LVDQNLNK EMKLRLDSIVIQQGRLVDQNLNKIGKDEML IVIQQGRLVDQNLNKIGKDEMLQMIRHGAT R L V N K I 0 0 2 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 942.51345 O60264 O60264 637 644 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.0029415 150.4 By MS/MS 3 0 1 1 1293100 1293100 0 9685 240 10016 24064 16943 16943 1 33755 0 LVDSVKENAGTVR LFRHQDVATRSRYVRLVDSVKENAGTVRIF VRLVDSVKENAGTVRIFSSLHVSGEQLSQL R L V V R I 1 1 1 1 0 0 1 1 0 0 1 1 0 0 0 1 1 0 0 3 0 0 13 1 1386.7467 Q9BRX2 Q9BRX2 332 344 PELO Protein pelota homolog yes yes 2 1.3241E-06 196.67 By MS/MS 7 0 1 1 2141500 2141500 0 9686 2331 10017 24065 16944 16944 1 38269 0 LVDVPFQVEFPAPK NARCLVNGLSLDHSKLVDVPFQVEFPAPKN KLVDVPFQVEFPAPKNELVQKFQVYYLGNV K L V P K N 1 0 0 1 0 1 1 0 0 0 1 1 0 2 3 0 0 0 0 3 0 0 14 0 1584.8552 O00213 O00213 523 536 APBB1 Amyloid beta A4 precursor protein-binding family B member 1 yes yes 2 0.0056955 101.35 By MS/MS 4 0 1 1 303550 303550 0 9687 78 10018 24066 16945 16945 1 8286.6 0 LVDVVAVILK ALAELGRRGLLLPSRLVDVVAVILKALTYD LLPSRLVDVVAVILKALTYDEKRGACSVGT R L V L K A 1 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 4 0 0 10 0 1067.6954 Q9BTW9 Q9BTW9 437 446 TBCD Tubulin-specific chaperone D yes yes 2 0.00082987 130.75 By MS/MS 4 0.816 1 1 1 3 766480 766480 0 9688 2354 10019 24067;24068;24069 16946 16946 1 21187 0 LVEAEVHR LKCYLHETLETIINRLVEAEVHRLVVVDEN LETIINRLVEAEVHRLVVVDENDVVKGIVS R L V H R L 1 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 951.51378 P54619 P54619 292 299 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes yes 2 0.044828 93.374 By MS/MS 7 0 1 1 873420 873420 0 9689 1015 10020 24070 16947 16947 1 15608 0 LVEALAAATEK LLFALKVLNMMPEEKLVEALAAATEKQKKA PEEKLVEALAAATEKQKKALEKLLPASS__ K L V E K Q 4 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 11 0 1114.6234 Q9BRJ7 Q9BRJ7 188 198 NUDT16L1 Protein syndesmos yes yes 2 0.0025458 118.03 By MS/MS 9 0 1 1 264130 264130 0 9690 2323 10021 24071 16948 16948 1 151590 0 LVEALCAEHQINLIK LCVLASNCDEPMYVKLVEALCAEHQINLIK LVEALCAEHQINLIKVDDNKKLGEWVGLCK K L V I K V 2 0 1 0 1 1 2 0 1 2 3 1 0 0 0 0 0 0 0 1 0 0 15 0 1749.9447 P25398 P25398 64 78 RPS12 40S ribosomal protein S12 yes yes 2 1.0084E-05 138.2 By MS/MS 10 0 1 1 640920 640920 0 9691 684 10022 24072 16949 16949 1 681230 0 LVEALDLFER YWYFLQCKHLIKEGKLVEALDLFERQMLKE IKEGKLVEALDLFERQMLKEERLQPMESNY K L V E R Q 1 1 0 1 0 0 2 0 0 0 3 0 0 1 0 0 0 0 0 1 0 0 10 0 1203.6499 O75127 O75127 152 161 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.00013539 161.63 By MS/MS 6 2 1 1 1 1 1 1 1 7 6535100 6535100 0 9692 280 10023 24073;24074;24075;24076;24077;24078;24079 16950;16951;16952 16950 3 277770 0 LVECQYELTDR IDYARQAGHHELAERLVECQYELTDRLAFY LAERLVECQYELTDRLAFYLCGRKPDHKNG R L V D R L 0 1 0 1 1 1 2 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 11 0 1424.6606 Q9Y2X7 Q9Y2X7 219 229 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 4.0061E-05 170.89 By MS/MS 4.5 0.5 1 1 2 1631900 1631900 0 9693 2905 10024 24080;24081 16953 16953 1 48963 0 LVEDEERR IRIWAHEALRLFQDRLVEDEERRWTDENID LRLFQDRLVEDEERRWTDENIDTVALKHFP R L V R R W 0 2 0 1 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 1044.52 Q14204 Q14204 2837 2844 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.8776E-05 211.39 By MS/MS 2 0.816 1 1 1 3 1602200 1602200 0 9694 1421 10025 24082;24083;24084 16954;16955 16954 2 75555 0 LVEDLQEELSSR AKKGVKIKLHKIIYRLVEDLQEELSSRLPC IYRLVEDLQEELSSRLPCAVEEHPVGEASI R L V S R L 0 1 0 1 0 1 3 0 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 0 1416.7096 P46199 P46199 602 613 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 1.3433E-11 211.63 By MS/MS 4.5 0.5 1 1 2 9263600 9263600 0 9695 879 10026 24085;24086 16956 16956 1 378500 0 LVEDMENKIR ETVSDCSPHIANIGRLVEDMENKIRSTLNE ANIGRLVEDMENKIRSTLNEIYFGKTKDIV R L V I R S 0 1 1 1 0 0 2 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 10 1 1245.6387 P47756 P47756 216 225 CAPZB F-actin-capping protein subunit beta yes yes 2 0.013782 117.7 By MS/MS 8.5 0.5 1 1 2 1180000 1180000 0 9696 895 10027 24087;24088 16957 16957 1 104110 0 LVEEGVPK AKIGFSAADAVTGLKLVEEGVPKEHLALLA DAVTGLKLVEEGVPKEHLALLAVPMVPLQI K L V P K E 0 0 0 0 0 0 2 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 8 0 869.48583 O00400 O00400 335 342 SLC33A1 Acetyl-coenzyme A transporter 1 yes yes 2 0.031717 98.523 By MS/MS 2 0.816 1 1 1 3 228290 228290 0 9697 90 10028 24089;24090;24091 16958 16958 1 9454.7 0 LVEEHLDSEIQK MFSKVLEHQLLQTTKLVEEHLDSEIQKLDQ TTKLVEEHLDSEIQKLDQMDEDELERLKEK K L V Q K L 0 0 0 1 0 1 3 0 1 1 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1438.7304 O14530 O14530 24 35 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 2 0.0003046 147.74 By MS/MS 8 0 1 1 1108700 1108700 0 9698 112 10029 24092 16959 16959 1 73142 0 LVEFMASGPIR QRFYREHEGRFFYQRLVEFMASGPIRAYIL FYQRLVEFMASGPIRAYILAHKDAIQLWRT R L V I R A 1 1 0 0 0 0 1 1 0 1 1 0 1 1 1 1 0 0 0 1 0 0 11 0 1218.6431 O75414 O75414 72 82 NME6 Nucleoside diphosphate kinase 6 yes yes 2 0.0011904 123.75 By MS/MS 9 0 1 1 282050 282050 0 9699 306 10030 24093 16960 16960 169 1 161870 0 LVEGPPPPPEPPK RFGIMEKVYCHYFVKLVEGPPPPPEPPKTA VKLVEGPPPPPEPPKTAVAHAKEYIQQLRS K L V P K T 0 0 0 0 0 0 2 1 0 0 1 1 0 0 7 0 0 0 0 1 0 0 13 0 1352.734 Q9NWU5 Q9NWU5 172 184 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 0.021323 90.05 By MS/MS 9 0 1 1 4359400 4359400 0 9700 2670 10031 24094 16961 16961 1 2501900 0 LVEIIGSR HKEMGIIPSWGGTTRLVEIIGSRQALKVLS SWGGTTRLVEIIGSRQALKVLSGALKLDSK R L V S R Q 0 1 0 0 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 8 0 885.52837 Q9NTX5 Q9NTX5 199 206 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 0.029378 99.442 By MS/MS 8 0 1 1 6777300 6777300 0 9701 2633 10032 24095 16962 16962 1 447100 0 LVEKGETDLIQK EKYKVLPRIHDVLCKLVEKGETDLIQKAMD LCKLVEKGETDLIQKAMDFVSQEQGEMVML K L V Q K A 0 0 0 1 0 1 2 1 0 1 2 2 0 0 0 0 1 0 0 1 0 0 12 1 1371.7609 P42704 P42704 865 876 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 5.5092E-16 227.36 By MS/MS By matching 3.55 1.37 1 1 4 2 2 1 10 1 135480000 135450000 30533 9702 854 10033 24096;24097;24098;24099;24100;24101;24102;24103;24104;24105;24106 16963;16964;16965;16966;16967;16968;16969 16964 7 3568500 43760 LVEKPSPLTLAPHDFANIK LQNCTLELATLGDLKLVEKPSPLTLAPHDF PSPLTLAPHDFANIKANVKVASTENGIIFG K L V I K A 2 0 1 1 0 0 1 0 1 1 3 2 0 1 3 1 1 0 0 1 0 0 19 1 2089.1572 P53618 P53618 768 786 COPB1 Coatomer subunit beta yes yes 4 0.033819 55.322 By MS/MS 4 0 1 1 711000 711000 0 9703 1004 10034 24107 16970 16970 1 19409 0 LVELCVAK WKFEIHRCIINNTHRLVELCVAKLSQDWFP IINNTHRLVELCVAKLSQDWFPLLELLAMA R L V A K L 1 0 0 0 1 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 8 0 930.52084 Q93008;O00507 Q93008 155 162 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.021852 104.37 By MS/MS 3 1.41 1 1 1 1 1 5 3941200 3941200 0 9704 2096 10035 24108;24109;24110;24111;24112 16971 16971 1 139750 0 LVELQNTR NRRLGEWDLPEAVQRLVELQNTRVPNAEEI LPEAVQRLVELQNTRVPNAEEIF_______ R L V T R V 0 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 8 0 971.53999 Q9BW92 Q9BW92 703 710 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.012567 116.37 By MS/MS By matching 6.5 2.4 1 2 1 1 1 1 1 7 1 11597000 11552000 45198 9705 2391 10036 24113;24114;24115;24116;24117;24118;24119;24120 16972;16973;16974;16975 16972 4 613680 133740 LVELQNTRVPNAEEIF NRRLGEWDLPEAVQRLVELQNTRVPNAEEI VELQNTRVPNAEEIF_______________ R L V I F - 1 1 2 0 0 1 3 0 0 1 2 0 0 1 1 0 1 0 0 2 0 0 16 1 1870.9789 Q9BW92 Q9BW92 703 718 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.025325 110.51 By MS/MS 6.5 1.71 1 1 1 1 1 1 6 6133800 6133800 0 9706 2391 10037 24121;24122;24123;24124;24125;24126 16976 16976 1 210780 0 LVELTQK CDRCVANNQVETLEKLVELTQKLFECDRDQ NQVETLEKLVELTQKLFECDRDQMYYNLLK K L V Q K L 0 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 7 0 829.49092 P42704;Q9NP80 P42704 942 948 LRPPRC;PNPLA8 Leucine-rich PPR motif-containing protein, mitochondrial;Calcium-independent phospholipase A2-gamma yes no 2 0.012279 147.69 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 45563000 45563000 0 9707 854 10038 24127;24128;24129;24130;24131;24132 16977 16977 1 1196000 0 LVENCVCLLR FIVQAEIGQKDSDSKLVENCVCLLRNLSYQ DSDSKLVENCVCLLRNLSYQVHREIPQAER K L V L R N 0 1 1 0 2 0 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 10 0 1274.6475 O60716 O60716 575 584 CTNND1 Catenin delta-1 yes yes 2 1.2629E-06 190.02 By MS/MS 4.5 0.5 1 1 2 4421500 4421500 0 9708 260 10039 24133;24134 16978 16978 1 131680 0 LVEQLDIEETEQSK EEQSQNDEDNQGSEKLVEQLDIEETEQSKL KLVEQLDIEETEQSKLPQYLERFKALHSKL K L V S K L 0 0 0 1 0 2 4 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1659.8203 Q92552 Q92552 313 326 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 3.8831E-06 173.59 By MS/MS 7 0 1 1 1787100 1787100 0 9709 2059 10040 24135 16979 16979 1 31936 0 LVEQVPDR ALTQGSYLHQRVCWRLVEQVPDRAMEAVLT HQRVCWRLVEQVPDRAMEAVLTGLVEAALG R L V D R A 0 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 8 0 954.51345 Q9Y4R8 Q9Y4R8 255 262 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0050312 126.24 By MS/MS 4 0 1 1 2206800 2206800 0 9710 2958 10041 24136 16980 16980 1 60243 0 LVESLPQEIK IKNYIQGINLVQAKKLVESLPQEIKANVAK VQAKKLVESLPQEIKANVAKAEAEKIKAAL K L V I K A 0 0 0 0 0 1 2 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 10 0 1154.6547 P52815 P52815 164 173 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 3.8517E-05 172.59 By MS/MS By matching 9.33 0.471 2 1 2 1 7922000 7797000 125000 9711 993 10042 24137;24138;24139 16981 16981 1 4515300 1347200 LVFFAEDVGSNK AEFRHDSGYEVHHQKLVFFAEDVGSNKGAI HQKLVFFAEDVGSNKGAIIGLMVGGVVIAT K L V N K G 1 0 1 1 0 0 1 1 0 0 1 1 0 2 0 1 0 0 0 2 0 0 12 0 1324.6663 P05067 P05067 688 699 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes yes 2 3.636E-05 188.99 By MS/MS 6.83 2.54 1 1 1 1 1 1 6 2906100 2906100 0 9712 465 10043 24140;24141;24142;24143;24144;24145 16982;16983;16984 16982 3 337520 0 LVFLACCVAPTNPR IRGLRALGVRDLSYRLVFLACCVAPTNPRF RLVFLACCVAPTNPRFGGKELRDEEQTAES R L V P R F 2 1 1 0 2 0 0 0 0 0 2 0 0 1 2 0 1 0 0 2 0 0 14 0 1616.8167 Q14566 Q14566 296 309 MCM6 DNA replication licensing factor MCM6 yes yes 2 2.9273E-06 174.4 By MS/MS 4.5 0.5 1 1 2 1181800 1181800 0 9713 1436 10044 24146;24147 16985 16985 1 32919 0 LVFLEDGTSQVR KFKMPFNNAKKMTHKLVFLEDGTSQVRKEP THKLVFLEDGTSQVRKEPKTYFNGDLKNFR K L V V R K 0 1 0 1 0 1 1 1 0 0 2 0 0 1 0 1 1 0 0 2 0 0 12 0 1362.7143 Q8IWC1 Q8IWC1 788 799 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 4.5031E-07 193.83 By MS/MS 3.5 0.5 1 1 2 2383000 2383000 0 9714 1864 10045 24148;24149 16986 16986 1 62356 0 LVFLGEQSVGK MSTGGDFGNPLRKFKLVFLGEQSVGKTSLI RKFKLVFLGEQSVGKTSLITRFMYDSFDNT K L V G K T 0 0 0 0 0 1 1 2 0 0 2 1 0 1 0 1 0 0 0 2 0 0 11 0 1175.655 P20340;Q9NRW1 P20340 16 26 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 2 4.7521E-05 169.76 By MS/MS 9 0 1 1 2008900 2008900 0 9715 641;2611 10046 24150 16987 16987 1 1152900 0 LVFLGLDNAGK SSVLQFLGLYKKSGKLVFLGLDNAGKTTLL KSGKLVFLGLDNAGKTTLLHMLKDDRLGQH K L V G K T 1 0 1 1 0 0 0 2 0 0 3 1 0 1 0 0 0 0 0 1 0 0 11 0 1145.6445 Q9NR31;Q9Y6B6 Q9NR31 28 38 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b yes no 2 0.00022293 154.01 By MS/MS 9.5 0.5 1 1 2 7514800 7514800 0 9716 2599 10047 24151;24152 16988;16989;16990 16988 3 4426100 0 LVFSNVNLK ACSDRPTVIYSSNHKLVFSNVNLKEVNYMC YSSNHKLVFSNVNLKEVNYMCPLNSDGYPD K L V L K E 0 0 2 0 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 9 0 1032.5968 Q16531 Q16531 666 674 DDB1 DNA damage-binding protein 1 yes yes 2 0.0023314 126.24 By MS/MS 3 1.41 1 1 1 1 1 5 1973100 1973100 0 9717 1537 10048 24153;24154;24155;24156;24157 16991 16991 1 68529 0 LVGDFTHDQSISQK KILCCISCNSNIQIKLVGDFTHDQSISQKL KLVGDFTHDQSISQKLMAGFVECLDCEDAE K L V Q K L 0 0 0 2 0 2 0 1 1 1 1 1 0 1 0 2 1 0 0 1 0 0 14 0 1573.7736 Q92621 Q92621 933 946 NUP205 Nuclear pore complex protein Nup205 yes yes 2 6.1751E-05 152.96 By MS/MS 2.5 0.5 1 1 2 350010 350010 0 9718 2070 10049 24158;24159 16992 16992 1 14068 0 LVGDVDFEGVR VGINRVHDPVTAKPKLVGDVDFEGVRQKAG AKPKLVGDVDFEGVRQKAGYITPVPGGVGP K L V V R Q 0 1 0 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 3 0 0 11 0 1204.6088 P13995 P13995 289 299 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 2 0.0033845 114.51 By MS/MS By matching 8.17 1.07 2 2 1 1 5 1 19866000 19847000 19102 9719 585 10050 24160;24161;24162;24163;24164;24165 16993;16994 16993 2 1453900 78418 LVGDVIQR ERTLVAVKPDGVQRRLVGDVIQRFERRGFT PDGVQRRLVGDVIQRFERRGFTLVGMKMLQ R L V Q R F 0 1 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 8 0 898.52362 O00746 O00746 53 60 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 2 0.0104 119.17 By MS/MS 10 0 1 1 597650 597650 0 9720 107 10051 24166 16995 16995 1 635240 0 LVGEIMQETGTR VEKAFHPFIAGPYNRLVGEIMQETGTRINI YNRLVGEIMQETGTRINIPPPSVNRTEIVF R L V T R I 0 1 0 0 0 1 2 2 0 1 1 0 1 0 0 0 2 0 0 1 0 0 12 0 1332.6708 Q00341 Q00341 244 255 HDLBP Vigilin yes yes 2 3.194E-24 244.16 By MS/MS By matching 3.17 0.687 1 3 2 5 1 4642700 4618000 24711 9721 1231 10052;10053 24167;24168;24169;24170;24171;24172 16996;16997 16996 1006 2 123050 35415 LVGGKDFEQPLAISR TQQIDLQGPGPWGFRLVGGKDFEQPLAISR LVGGKDFEQPLAISRVTPGSKAALANLCIG R L V S R V 1 1 0 1 0 1 1 2 0 1 2 1 0 1 1 1 0 0 0 1 0 0 15 1 1628.8886 O00151 O00151 18 32 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 8.5299E-09 177.36 By MS/MS 7.5 0.5 1 1 2 2437200 2437200 0 9722 71 10054 24173;24174 16998;16999 16999 1 116480 0 LVGGTTPGK QGTFHSQQALEYGTKLVGGTTPGKGGQTHL LEYGTKLVGGTTPGKGGQTHLGLPVFNTVK K L V G K G 0 0 0 0 0 0 0 3 0 0 1 1 0 0 1 0 2 0 0 1 0 0 9 0 828.47052 P53597 P53597 82 90 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.028636 91.853 By MS/MS 8.5 1.12 1 1 1 1 4 7834200 7834200 0 9723 1002 10055 24175;24176;24177;24178 17000 17000 1 675640 0 LVGIISSR FCGIPITDTGRMGSRLVGIISSRDIDFLKE TGRMGSRLVGIISSRDIDFLKEEEHDCFLE R L V S R D 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 8 0 843.5178 P12268 P12268 154 161 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 0.020312 106.36 By MS/MS By matching 6.33 0.471 2 1 2 1 14934000 14814000 120120 9724 564 10056 24179;24180;24181 17001 17001 1 126000 368410 LVGILDILDEENR HYVDNQDCIDLIEAKLVGILDILDEENRLP AKLVGILDILDEENRLPQPSDQHFTSAVHQ K L V N R L 0 1 1 2 0 0 2 1 0 2 3 0 0 0 0 0 0 0 0 1 0 0 13 0 1497.8039 Q9UM54 Q9UM54 522 534 MYO6 Unconventional myosin-VI yes yes 2 0.0034643 123.79 By MS/MS 3.5 0.5 1 1 2 122560 122560 0 9725 2833 10057 24182;24183 17002;17003 17003 2 3230.9 0 LVGLEAPSVR EDEEVARRLWAESARLVGLEAPSVREQPLP AESARLVGLEAPSVREQPLPR_________ R L V V R E 1 1 0 0 0 0 1 1 0 0 2 0 0 0 1 1 0 0 0 2 0 0 10 0 1039.6026 Q8NBN7 Q8NBN7 316 325 RDH13 Retinol dehydrogenase 13 yes yes 2 0.013809 96.668 By MS/MS By matching 8 0 2 1 1 5812400 5795200 17248 9726 1943 10058 24184;24185 17004 17004 1 382310 147150 LVGLTGTREEVDQVAR TKEAIANYVKEFSPKLVGLTGTREEVDQVA VGLTGTREEVDQVARAYRVYYSPGPKDEDE K L V A R A 1 2 0 1 0 1 2 2 0 0 2 0 0 0 0 0 2 0 0 3 0 0 16 1 1741.9323 O75880 O75880 224 239 SCO1 Protein SCO1 homolog, mitochondrial yes yes 2;3 0.0065934 147.24 By MS/MS 9 0.816 2 2 2 6 15601000 15601000 0 9727 334 10059 24186;24187;24188;24189;24190;24191 17005;17006;17007 17005 3 3240800 0 LVGPEEALSPGEAR ADSWPQLQDHFSAVKLVGPEEALSPGEARD KLVGPEEALSPGEARDMAMDLCRQDPECEF K L V A R D 2 1 0 0 0 0 3 2 0 0 2 0 0 0 2 1 0 0 0 1 0 0 14 0 1423.7307 O60568 O60568 359 372 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 2 0.0032331 111.52 By MS/MS 5 0 1 1 1244900 1244900 0 9728 253 10060 24192 17008 17008 1 51169 0 LVGQGASAVLLDLPNSGGEAQAK ITGGASGLGLATAERLVGQGASAVLLDLPN VLLDLPNSGGEAQAKKLGNNCVFAPADVTS R L V A K K 4 0 1 1 0 2 1 4 0 0 4 1 0 0 1 2 0 0 0 2 0 0 23 0 2194.1594 Q99714 Q99714 30 52 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2;3 9.5878E-16 233.48 By MS/MS 8.5 0.5 2 2 4 8906300 8906300 0 9729 2285 10061 24193;24194;24195;24196 17009;17010;17011;17012 17011 4 1851500 0 LVGQSIIAYLQK NRKYDEVLHMVRNAKLVGQSIIAYLQKKGY NAKLVGQSIIAYLQKKGYPEVALHFVKDEK K L V Q K K 1 0 0 0 0 2 0 1 0 2 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1331.7813 P53621 P53621 620 631 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.052022 73.885 By MS/MS 3 0 1 1 121480 121480 0 9730 1005 10062 24197 17013 17013 1 3171.2 0 LVGSDQETLR PESAIKFMAYEQIKRLVGSDQETLRIHERL EQIKRLVGSDQETLRIHERLVAGSLAGAIA R L V L R I 0 1 0 1 0 1 1 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1116.5775 Q6KCM7 Q6KCM7 270 279 SLC25A25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 2 0.0059885 104.22 By MS/MS 7 0 1 1 1823500 1823500 0 9731 1686 10063 24198 17014 17014 1 32586 0 LVGSQEELASWGHEYVR LAMTMSGERECLKYRLVGSQEELASWGHEY GSQEELASWGHEYVRHLAGEVAKEWQELDD R L V V R H 1 1 0 0 0 1 3 2 1 0 2 0 0 0 0 2 0 1 1 2 0 0 17 0 1958.9486 Q13200 Q13200 144 160 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.022766 66.826 By MS/MS 5 0.816 1 1 1 3 4959800 4959800 0 9732 1347 10064 24199;24200;24201 17015 17015 1 104950 0 LVHSYPYDWR IKMLQTAKNLLKEEKLVHSYPYDWRTKKPV LKEEKLVHSYPYDWRTKKPVVIRASKQWFI K L V W R T 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 0 1 2 1 0 0 10 0 1334.6408 Q9NSE4 Q9NSE4 459 468 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2;3 0.012191 87.308 By MS/MS 4 0.707 1 2 1 4 4237300 4237300 0 9733 2624 10065 24202;24203;24204;24205 17016;17017 17016 2 120510 0 LVICPDEGFYK CDISFSDPDDLLNFKLVICPDEGFYKSGKF LNFKLVICPDEGFYKSGKFVFSFKVGQGYP K L V Y K S 0 0 0 1 1 0 1 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 11 0 1339.6482 P61081 P61081 62 72 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.0021375 119.75 By MS/MS 9.5 0.5 1 1 2 1997600 1997600 0 9734 1086 10066 24206;24207 17018;17019 17018 2 1243300 0 LVIDQIDNGFFSPK GYEAKEYYEALPELKLVIDQIDNGFFSPKQ KLVIDQIDNGFFSPKQPDLFKDIINMLFYH K L V P K Q 0 0 1 2 0 1 0 1 0 2 1 1 0 2 1 1 0 0 0 1 0 0 14 0 1591.8246 P06737 P06737 741 754 PYGL Glycogen phosphorylase, liver form yes yes 2 0.00010407 158.01 By MS/MS 4 0 1 1 470120 470120 0 9735 483 10067 24208 17020 17020 1 12834 0 LVIEEAER SPGKTVTIVVRGSNKLVIEEAERSIHDALC VVRGSNKLVIEEAERSIHDALCVIRCLVKK K L V E R S 1 1 0 0 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 957.51311 P50991 P50991 396 403 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0041761 140.09 By MS/MS By matching 7.29 1.67 1 2 1 1 1 1 6 1 178390000 178280000 109310 9736 956 10068 24209;24210;24211;24212;24213;24214;24215 17021;17022;17023;17024;17025;17026;17027 17022 7 2636900 335250 LVIITAGAR KIVSGKDYNVTANSKLVIITAGARQQEGES VTANSKLVIITAGARQQEGESRLNLVQRNV K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes yes 2 0.00063152 150.4 By MS/MS 9 0.816 1 1 1 3 6700700 6700700 0 9737 424 10069 24216;24217;24218 17028 17028 1 581080 0 LVILANNCPALR GYKQTLKMIRQGKAKLVILANNCPALRKSE KAKLVILANNCPALRKSEIEYYAMLAKTGV K L V L R K 2 1 2 0 1 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 12 0 1352.7598 P62888 P62888 45 56 RPL30 60S ribosomal protein L30 yes yes 2 1.9313E-16 218.06 By MS/MS 10 0 1 1 1137800 1137800 0 9738 1157 10070 24219 17029 17029 1 1209400 0 LVINGNPITIFQER THGKFHGTVKAENGKLVINGNPITIFQERD KLVINGNPITIFQERDPSKIKWGDAGAEYV K L V E R D 0 1 2 0 0 1 1 1 0 3 1 0 0 1 1 0 1 0 0 1 0 0 14 0 1612.8937 P04406 P04406 67 80 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 1.9165E-05 160.72 By MS/MS 7 0 1 1 230320 230320 0 9739 452 10071 24220 17030 17030 1 4115.9 0 LVIVGDGACGK ______________________________ IRKKLVIVGDGACGKTCLLIVFSKDQFPEV K L V G K T 1 0 0 1 1 0 0 3 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1087.5696 P61586;P08134 P61586 8 18 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 2 0.0015535 126.24 By MS/MS 9 0 1 1 3449200 3449200 0 9740 1101;498 10072 24221 17031 17031 1 1979500 0 LVKDVFISAAER QNVEHVPLSLDRAMRLVKDVFISAAERDVY AMRLVKDVFISAAERDVYTGDALRICIVTK R L V E R D 2 1 0 1 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 2 0 0 12 1 1346.7558 P20618 P20618 202 213 PSMB1 Proteasome subunit beta type-1 yes yes 2;3 0.010601 128.36 By MS/MS 9 0 2 2 1904900 1904900 0 9741 643 10073 24222;24223 17032;17033 17032 2 1093300 0 LVKPGNQNTQVTEAWNK DVIKAAHLCAEAALRLVKPGNQNTQVTEAW KPGNQNTQVTEAWNKVAHSFNCTPIEGMLS R L V N K V 1 0 3 0 0 2 1 1 0 0 1 2 0 0 1 0 2 1 0 2 0 0 17 1 1925.9959 Q9UQ80 Q9UQ80 156 172 PA2G4 Proliferation-associated protein 2G4 yes yes 3 0.041696 58.461 By MS/MS 6.5 0.5 1 1 2 4024000 4024000 0 9742 2859 10074 24224;24225 17034 17034 1 58708 0 LVLDPYLLK IGTKMQKTAKVRVTRLVLDPYLLKYFNKRK KVRVTRLVLDPYLLKYFNKRKTYFAHDALQ R L V L K Y 0 0 0 1 0 0 0 0 0 0 4 1 0 0 1 0 0 0 1 1 0 0 9 0 1072.6532 Q9Y2R5 Q9Y2R5 33 41 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 2 0.0083262 108.46 By MS/MS 9.5 0.5 1 1 2 7056000 7056000 0 9743 2898 10075 24226;24227 17035 17035 1 7393700 0 LVLDQLR IVPNHEKRAGKLEPRLVLDQLRCNGVLEGI RAGKLEPRLVLDQLRCNGVLEGIRICRQGF R L V L R C 0 1 0 1 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 855.5178 Q7Z406 Q7Z406 711 717 MYH14 Myosin-14 yes yes 2 0.056579 99.375 By MS/MS By matching 1 0 2 1 1 1566500 1517100 49406 9744 1788 10076 24228;24229 17036 17036 1 74124 49406 LVLDSVKLEA NEKDLEEAEEYKEARLVLDSVKLEA_____ YKEARLVLDSVKLEA_______________ R L V E A - 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 10 1 1085.6332 O75347 O75347 99 108 TBCA Tubulin-specific chaperone A yes yes 2 0.0026777 150.35 By MS/MS 10 0 1 1 871630 871630 0 9745 297 10077 24230 17037 17037 1 926450 0 LVLDWDSVR VEIPNIQKQRKQLARLVLDWDSVRARWNQA RKQLARLVLDWDSVRARWNQAHKSSGTNFQ R L V V R A 0 1 0 2 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 2 0 0 9 0 1101.5819 Q68EM7 Q68EM7 144 152 ARHGAP17 Rho GTPase-activating protein 17 yes yes 2 0.025459 93.649 By MS/MS 3.5 0.5 1 1 2 642450 642450 0 9746 1675 10078 24231;24232 17038 17038 1 17432 0 LVLEVAQHLGESTVR PPILNALEVQGRETRLVLEVAQHLGESTVR LVLEVAQHLGESTVRTIAMDGTEGLVRGQK R L V V R T 1 1 0 0 0 1 2 1 1 0 3 0 0 0 0 1 1 0 0 3 0 0 15 0 1649.9101 P06576 P06576 95 109 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 1.4019E-20 222.81 By MS/MS 6 0 2 2 413640000 413640000 0 9747 478 10079 24233;24234 17039;17040 17039 2 3225600 0 LVLEVLQK NLEYPSPSEVFTKIRLVLEVLQKQLLDLPL EVFTKIRLVLEVLQKQLLDLPLDTDLENEK R L V Q K Q 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 8 0 940.59572 O43264 O43264 298 305 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.0080258 125.81 By MS/MS 5 0 1 1 320050 320050 0 9748 189 10080 24235 17041 17041 1 13155 0 LVLLALEDGSALSR GCQFLGPAMQEEALKLVLLALEDGSALSRK KLVLLALEDGSALSRKVLVLFVVQRLEPRF K L V S R K 2 1 0 1 0 0 1 1 0 0 5 0 0 0 0 2 0 0 0 1 0 0 14 0 1455.8297 Q5TC82;Q9HBD1 Q5TC82 206 219 RC3H1;RC3H2 Roquin-1;Roquin-2 yes no 2 0.010432 93.959 By MS/MS 3 0 1 1 84867 84867 0 9749 1638 10081 24236 17042 17042 1 2215.5 0 LVLLGESAVGK RPNGPAAGNKICQFKLVLLGESAVGKSSLV CQFKLVLLGESAVGKSSLVLRFVKGQFHEY K L V G K S 1 0 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 0 2 0 0 11 0 1084.6492 P20339;P51148;P61020 P51148 24 34 RAB5A;RAB5C;RAB5B Ras-related protein Rab-5A;Ras-related protein Rab-5C;Ras-related protein Rab-5B no no 2 0.00037302 157.96 By MS/MS 9 0.816 1 1 1 3 6979900 6979900 0 9750 959;640;1084 10082 24237;24238;24239 17043;17044 17044 2 3733100 0 LVLMSATGDNER LILLKGLQRLNPALRLVLMSATGDNERFSR ALRLVLMSATGDNERFSRYFGGCPVIKVPG R L V E R F 1 1 1 1 0 0 1 1 0 0 2 0 1 0 0 1 1 0 0 1 0 0 12 0 1304.6395 Q7L2E3 Q7L2E3 587 598 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 2.3019E-05 169.58 By MS/MS By matching 3.38 0.484 5 3 6 2 12816000 12709000 106260 9751 1763 10083;10084 24240;24241;24242;24243;24244;24245;24246;24247 17045;17046;17047;17048 17046 1246 4 336580 152290 LVLQYAPSA PFIKEYQAKENDFDRLVLQYAPSA______ ENDFDRLVLQYAPSA_______________ R L V S A - 2 0 0 0 0 1 0 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 9 0 960.52803 O14579 O14579 300 308 COPE Coatomer subunit epsilon yes yes 2 0.0009562 143.11 By MS/MS 8 0 1 1 657680 657680 0 9752 115 10085 24248 17049 17049 1 43387 0 LVLTTLDFQK IHSRLSRQSISTREKLVLTTLDFQKALRGF STREKLVLTTLDFQKALRGFLPASLRSVNL K L V Q K A 0 0 0 1 0 1 0 0 0 0 3 1 0 1 0 0 2 0 0 1 0 0 10 0 1176.6754 O43933 O43933 807 816 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.00012358 162.97 By MS/MS 3 0 1 1 458420 458420 0 9753 235 10086 24249 17050 17050 1 11967 0 LVLVGDGGTGK ______________________________ VQFKLVLVGDGGTGKTTFVKRHLTGEFEKK K L V G K T 0 0 0 1 0 0 0 4 0 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1014.571 P62826 P62826 13 23 RAN GTP-binding nuclear protein Ran yes yes 2 0.0060768 125.71 By MS/MS 8.5 0.5 1 1 2 8828800 8828800 0 9754 1146 10087 24250;24251 17051;17052 17052 2 5066900 0 LVLVSPTSEQYDSLLR GEALNGEPELDLTSKLVLVSPTSEQYDSLL VLVSPTSEQYDSLLRQMWERMDEGCGETIY K L V L R Q 0 1 0 1 0 1 1 0 0 0 4 0 0 0 1 3 1 0 1 2 0 0 16 0 1818.9727 O00178 O00178 65 80 GTPBP1 GTP-binding protein 1 yes yes 2 0.00053741 120.84 By MS/MS 5 0 1 1 186890 186890 0 9755 75 10088 24252 17053 17053 1 7682.1 0 LVLYPSAQEK EALESDPLHKELLEKLVLYPSAQEKVLQRS ELLEKLVLYPSAQEKVLQRSSVLQVSVLQS K L V E K V 1 0 0 0 0 1 1 0 0 0 2 1 0 0 1 1 0 0 1 1 0 0 10 0 1146.6285 Q6L8Q7 Q6L8Q7 418 427 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.018148 93.649 By MS/MS 4.5 1.12 1 1 1 1 4 14155000 14155000 0 9756 1687 10089 24253;24254;24255;24256 17054 17054 1 425300 0 LVMAAANR GSLSLGHPFGATGCRLVMAAANRLRKEGGQ FGATGCRLVMAAANRLRKEGGQYGLVAACA R L V N R L 3 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 8 0 844.45891 P55084 P55084 437 444 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.013163 107.74 By MS/MS 6.5 0.5 1 1 2 2882400 2882400 0 9757 1027 10090 24257;24258 17055 17055 804 1 42601 0 LVMAGETTNSR PGSTVFTEDCNILLKLVMAGETTNSRGQRL ILLKLVMAGETTNSRGQRLPQKGDVEMLCG K L V S R G 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 2 0 0 1 0 0 11 0 1177.5761 P26358 P26358 1197 1207 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0029069 116.52 By MS/MS 2 0 1 1 328880 328880 0 9758 693 10091 24259 17056 17056 1 16347 0 LVNELTEFAK FSQYLQQCPFDEHVKLVNELTEFAKTCVAD DEHVKLVNELTEFAKTCVADESHAGCEKSL K L V A K T 1 0 1 0 0 0 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1162.6234 CON__P02769 CON__P02769 66 75 yes yes 2 3.5982E-05 172.88 By MS/MS By matching 7 1.63 1 2 1 1 1 5 1 8559700 8489100 70664 + 9759 43 10092 24260;24261;24262;24263;24264;24265 17057;17058;17059;17060;17061;17062;17063 17058 7 418770 216720 LVNEVTEFAK FAQYLQQCPFEDHVKLVNEVTEFAKTCVAD EDHVKLVNEVTEFAKTCVADESAENCDKSL K L V A K T 1 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1148.6077 CON__P02768-1;P02768 CON__P02768-1 66 75 ALB Serum albumin yes no 2 0.01871 93.258 By MS/MS 5.5 0.5 1 1 2 100810 0 100810 + 9760 42 10093 24266;24267 17064 17064 1 0 307460 LVNHFVEEFK TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK DFDNRLVNHFVEEFKRKHKKDISQNKRAVR R L V F K R 0 0 1 0 0 0 2 0 1 0 1 1 0 2 0 0 0 0 0 2 0 0 10 0 1260.6503 P0DMV9;P0DMV8 P0DMV9 237 246 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 0.00036248 150.35 By MS/MS 5 0 2 2 28688000 28688000 0 9761 528 10094 24268;24269 17065;17066 17066 2 1179200 0 LVNHFVEEFKR TAGDTHLGGEDFDNRLVNHFVEEFKRKHKK FDNRLVNHFVEEFKRKHKKDISQNKRAVRR R L V K R K 0 1 1 0 0 0 2 0 1 0 1 1 0 2 0 0 0 0 0 2 0 0 11 1 1416.7514 P0DMV9;P0DMV8 P0DMV9 237 247 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3;4 0.017137 83.226 By MS/MS 5.5 0.5 2 2 4 8435400 8435400 0 9762 528 10095 24270;24271;24272;24273 17067;17068;17069 17068 2 268400 0 LVNLADCLCNEDLESR ALVTPWLKGDILGEKLVNLADCLCNEDLES VNLADCLCNEDLESRVSSESHFSERWTLLS K L V S R V 1 1 2 2 2 0 2 0 0 0 4 0 0 0 0 1 0 0 0 1 0 0 16 0 1919.8717 O94822 O94822 745 760 LTN1 E3 ubiquitin-protein ligase listerin yes yes 2 2.0723E-21 229.9 By MS/MS 2.5 0.5 1 1 2 988510 988510 0 9763 352 10096 24274;24275 17070 17070 1 29263 0 LVNQWIK LAALLNKCKTPQGQRLVNQWIKQPLMDKNR CKTPQGQRLVNQWIKQPLMDKNRIEERLNL R L V I K Q 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 7 0 899.52289 P43246 P43246 341 347 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.037598 109.7 By MS/MS 4 0 1 1 1265200 1265200 0 9764 862 10097 24276 17071 17071 1 34538 0 LVNSQGQLR RGHRVIPAALKAFRRLVNSQGQLRVPVVFV LKAFRRLVNSQGQLRVPVVFVTNAGNILQH R L V L R V 0 1 1 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1013.5618 Q9BXW7 Q9BXW7 74 82 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 3.9775E-06 181.41 By MS/MS By matching 7 0 2 1 1 28373000 28355000 17776 9765 2404 10098 24277;24278 17072 17072 1 506710 72972 LVNTINPGAR NNLRESLMQFSKPRKLVNTINPGARFMTTA SKPRKLVNTINPGARFMTTAMYDAREAIIP K L V A R F 1 1 2 0 0 0 0 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 10 0 1053.5931 Q92900 Q92900 930 939 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.00077839 133.13 By MS/MS 3 0 1 1 531200 531200 0 9766 2088 10099 24279 17073 17073 1 13867 0 LVNTSENLSK ELGEQRDQLERTKSRLVNTSENLSKSRKIL RTKSRLVNTSENLSKSRKILRSMSRKVTTN R L V S K S 0 0 2 0 0 0 1 0 0 0 2 1 0 0 0 2 1 0 0 1 0 0 10 0 1103.5823 Q9UEU0 Q9UEU0 181 190 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes yes 2 0.00023516 167.93 By MS/MS 8 0 1 1 1004500 1004500 0 9767 2765 10100 24280 17074 17074 1 66268 0 LVPELDTIVPLESTK QDPAPVRECHDPSDRLVPELDTIVPLESTK LVPELDTIVPLESTKAYNMVDIIHSVVDER R L V T K A 0 0 0 1 0 0 2 0 0 1 3 1 0 0 2 1 2 0 0 2 0 0 15 0 1652.9237 P05166 P05166 298 312 PCCB Propionyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.0076709 98.105 By MS/MS 7 0.816 1 1 1 3 1790200 1790200 0 9768 470 10101 24281;24282;24283 17075 17075 1 20743 0 LVPGGGATEIELAK DDGVNTFKVLTRDKRLVPGGGATEIELAKQ RLVPGGGATEIELAKQITSYGETCPGLEQY R L V A K Q 2 0 0 0 0 0 2 3 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1353.7504 P50990 P50990 408 421 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0053474 96.604 By MS/MS By matching 6.71 2.71 1 2 1 1 1 1 6 1 698480000 697930000 543520 9769 955 10102 24284;24285;24286;24287;24288;24289;24290 17076;17077 17076 2 15291000 1666900 LVPLLDRPFDETTYEETED DEVGDLLQLKYSRHRLVPLLDRPFDETTYE LDRPFDETTYEETED_______________ R L V E D - 0 1 0 3 0 0 4 0 0 0 3 0 0 1 2 0 3 0 1 1 0 0 19 1 2281.0638 O15270 O15270 544 562 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.00075538 132.86 By MS/MS 6 0 1 1 11207000 11207000 0 9770 166 10103 24291 17078 17078 1 87389 0 LVPLLDTGDIIIDGGNSEYR LLVKAGQAVDDFIEKLVPLLDTGDIIIDGG DTGDIIIDGGNSEYRDTTRRCRDLKAKGIL K L V Y R D 0 1 1 3 0 0 1 3 0 3 3 0 0 0 1 1 1 0 1 1 0 0 20 0 2159.111 P52209 P52209 88 107 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 2.2289E-31 224.55 By MS/MS 6.33 0.471 2 1 3 7102700 7102700 0 9771 981 10104 24292;24293;24294 17079;17080;17081;17082;17083 17079 4 56139 0 LVPLNQESVEER SGHIDRAFDIIERLKLVPLNQESVEERVAA RLKLVPLNQESVEERVAAFRNFSDEIRHNL K L V E R V 0 1 1 0 0 1 3 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 12 0 1411.7307 Q8N1F7 Q8N1F7 719 730 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.035456 78.903 By MS/MS 4.5 0.5 1 1 2 2951700 2951700 0 9772 1898 10105 24295;24296 17084;17085 17085 2 111320 0 LVPLVNGVR ILHENTQTDKALYNRLVPLVNGVREFSEIQ KALYNRLVPLVNGVREFSEIQLARLKKLGI R L V V R E 0 1 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 3 0 0 9 0 965.6022 Q6UB35 Q6UB35 522 530 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.030541 90.777 By MS/MS By matching 4.33 0.471 2 1 2 1 5346300 5294200 52042 9773 1726 10106 24297;24298;24299 17086 17086 1 151650 108750 LVQAFQFTDK VNDLPVGRSVDETLRLVQAFQFTDKHGEVC DETLRLVQAFQFTDKHGEVCPAGWKPGSDT R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 10 0 1195.6237 Q06830 Q06830 159 168 PRDX1 Peroxiredoxin-1 yes yes 2 0.00075314 142 By MS/MS 9.5 0.5 1 1 2 5694600 5694600 0 9774 1277 10107 24300;24301 17087;17088 17087 2 3372400 0 LVQAFQYTDK LNDLPVGRSVDETLRLVQAFQYTDKHGEVC DETLRLVQAFQYTDKHGEVCPAGWKPGSET R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 0 10 0 1211.6186 Q13162 Q13162 231 240 PRDX4 Peroxiredoxin-4 yes yes 2 0.00077638 133.23 By MS/MS 8 0 1 1 1267000 1267000 0 9775 1343 10108 24302 17089 17089 1 83583 0 LVQALLEK WEVYVCSQHSPANRKLVQALLEKHVSSLRA HSPANRKLVQALLEKHVSSLRAHETWGDSI K L V E K H 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 8 0 912.56442 Q9NU22 Q9NU22 2407 2414 MDN1 Midasin yes yes 2 0.017179 110.41 By MS/MS 1.5 0.5 1 1 2 297860 297860 0 9776 2635 10109 24303;24304 17090 17090 1 14628 0 LVQASEELLR VRRFERKGFKLVALKLVQASEELLREHYAE LVALKLVQASEELLREHYAELRERPFYGRL K L V L R E 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1156.6452 Q13232 Q13232 57 66 NME3 Nucleoside diphosphate kinase 3 yes yes 2 0.00014513 160.53 By MS/MS 9 0.816 1 1 1 3 2847300 2847300 0 9777 1349 10110 24305;24306;24307 17091 17091 1 935430 0 LVQDVANNTNEEAGDGTTTATVLAR KSIDLKDKYKNIGAKLVQDVANNTNEEAGD EEAGDGTTTATVLARSIAKEGFEKISKGAN K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 3.4959E-85 293.35 By MS/MS By MS/MS 6.42 2.3 1 2 1 2 4 2 3 2 2 16 3 902530000 901220000 1309900 9778 544 10111 24308;24309;24310;24311;24312;24313;24314;24315;24316;24317;24318;24319;24320;24321;24322;24323;24324;24325;24326 17092;17093;17094;17095;17096;17097;17098;17099;17100;17101;17102;17103;17104;17105;17106;17107;17108;17109;17110;17111;17112;17113 17101 22 16101000 4151100 LVQEQGSHSK ECWFPKATDKTFVEKLVQEQGSHSKFQKPR TFVEKLVQEQGSHSKFQKPRQLKDKADFCI K L V S K F 0 0 0 0 0 2 1 1 1 0 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1111.5622 P35580 P35580 553 562 MYH10 Myosin-10 yes yes 2 0.00030656 152.54 By MS/MS 2 0 1 1 374870 374870 0 9779 794 10112 24327 17114 17114 1 18633 0 LVQLLGGVAEK VGGKRLREELLKQTKLVQLLGGVAEKVRQA KQTKLVQLLGGVAEKVRQASGSARQVVLQR K L V E K V 1 0 0 0 0 1 1 2 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1125.6758 O00443 O00443 1052 1062 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 2 0.0071503 105.98 By MS/MS 3 0 1 1 615980 615980 0 9780 96 10113 24328 17115 17115 1 16080 0 LVQLLVK PANHAPLQEAAVIPRLVQLLVKAHQDAQRH QEAAVIPRLVQLLVKAHQDAQRHVAAGTQQ R L V V K A 0 0 0 0 0 1 0 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 7 0 811.55312 P14923 P14923 527 533 JUP Junction plakoglobin yes yes 2 0.030534 114.59 By MS/MS 5 0 1 1 681790 681790 0 9781 595 10114 24329 17116 17116 1 28024 0 LVQQGLLTPDMLK EPPSPDAGELSLASRLVQQGLLTPDMLKQL SRLVQQGLLTPDMLKQLEKEWMTQQTEHNK R L V L K Q 0 0 0 1 0 2 0 1 0 0 4 1 1 0 1 0 1 0 0 1 0 0 13 0 1454.8167 Q8IYB8 Q8IYB8 737 749 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 1.8351E-07 179.94 By MS/MS 5 0 2 2 1746900 1746900 0 9782 1879 10115;10116 24330;24331 17117;17118 17118 1284 2 71805 0 LVQSPNSYFMDVK HPSPEEEKRKHKKKRLVQSPNSYFMDVKCP KRLVQSPNSYFMDVKCPGCYKITTVFSHAQ R L V V K C 0 0 1 1 0 1 0 0 0 0 1 1 1 1 1 2 0 0 1 2 0 0 13 0 1526.7439 P42677;Q71UM5 P42677 24 36 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 2 2.5713E-06 175.48 By MS/MS By MS/MS 10 0 2 1 1 2829000 2795000 34040 9783 852;1755 10117 24332;24333 17119;17120 17120 602 2 2970800 873100 LVQSQVAR SLVLRLLQGKEPVIRLVQSQVARYPFHKQP GKEPVIRLVQSQVARYPFHKQPPTYVRAQR R L V A R Y 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 899.51886 Q9BU23 Q9BU23 539 546 LMF2 Lipase maturation factor 2 yes yes 2 0.0052244 136.27 By MS/MS 2.5 1.12 1 1 1 1 4 2830000 2830000 0 9784 2359 10118 24334;24335;24336;24337 17121;17122 17121 2 111740 0 LVQTAAQQVAEDK ______________________________ GRLVQTAAQQVAEDKFVFDLPDYESINHVV R L V D K F 3 0 0 1 0 3 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1399.7307 Q53FT3 Q53FT3 10 22 C11orf73 Protein Hikeshi yes yes 2 1.4435E-07 210.44 By MS/MS 9 0 1 1 1059300 1059300 0 9785 1582 10119 24338 17123 17123 1 607940 0 LVQTPLTDR AKFNYGFEYLGVQDKLVQTPLTDRCYLTMT LGVQDKLVQTPLTDRCYLTMTQALEARLGG K L V D R C 0 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 9 0 1041.5819 Q14204 Q14204 1879 1887 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0083221 109.29 By MS/MS 1.5 0.5 1 1 2 1505700 1505700 0 9786 1421 10120 24339;24340 17124;17125 17124 2 74040 0 LVRPPVQVYGIEGR QVRCFSTSVVRPFAKLVRPPVQVYGIEGRY KLVRPPVQVYGIEGRYATALYSAASKQNKL K L V G R Y 0 2 0 0 0 1 1 2 0 1 1 0 0 0 2 0 0 0 1 3 0 0 14 1 1581.8991 P48047 P48047 27 40 ATP5O ATP synthase subunit O, mitochondrial yes yes 3 0.006025 89.629 By MS/MS 9.5 0.5 1 1 2 14561000 14561000 0 9787 900 10121 24341;24342 17126 17126 1 8428000 0 LVSDEMVVELIEK SELGKKLKATMDAGKLVSDEMVVELIEKNL GKLVSDEMVVELIEKNLETPLCKNGFLLDG K L V E K N 0 0 0 1 0 0 3 0 0 1 2 1 1 0 0 1 0 0 0 3 0 0 13 0 1502.7902 P54819 P54819 73 85 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 2 7.9059E-06 172.61 By MS/MS 8 0 1 1 326050 326050 0 9788 1018 10122 24343 17127 17127 787 1 21510 0 LVSGGGACSDTGACTPAR YNKSLAFQKLGMESRLVSGGGACSDTGACT GGGACSDTGACTPARSFLAQQRHITNTRRN R L V A R S 3 1 0 1 2 0 0 4 0 0 1 0 0 0 1 2 2 0 0 1 0 0 18 0 1735.7618 Q9UJC3 Q9UJC3 685 702 HOOK1 Protein Hook homolog 1 yes yes 2 2.4482E-14 190.57 By MS/MS 4 0 1 1 665870 665870 0 9789 2794 10123 24344 17128 17128 1 18177 0 LVSIGAEEIVDGNAK NVNKALDFIASKGVKLVSIGAEEIVDGNAK LVSIGAEEIVDGNAKMTLGMIWTIILRFAI K L V A K M 2 0 1 1 0 0 2 2 0 2 1 1 0 0 0 1 0 0 0 2 0 0 15 0 1513.7988 O43707 O43707 126 140 ACTN4 Alpha-actinin-4 yes yes 2 1.7008E-07 171.26 By MS/MS 4 0 1 1 845380 845380 0 9790 217 10124 24345 17129 17129 1 23078 0 LVSIPDEIFCEEIAK AQYDPAKPNYISLDKLVSIPDEIFCEEIAK LVSIPDEIFCEEIAKASVQDFEKFLKTL__ K L V A K A 1 0 0 1 1 0 3 0 0 3 1 1 0 1 1 1 0 0 0 1 0 0 15 0 1761.8859 Q96E29 Q96E29 390 404 MTERF3 Transcription termination factor 3, mitochondrial yes yes 2 7.0963E-06 151.26 By MS/MS 7.5 0.5 1 1 2 1224200 1224200 0 9791 2158 10125 24346;24347 17130 17130 1 28958 0 LVSIVADQLEK QIVCDWTDYDERMKKLVSIVADQLEKNRLP RMKKLVSIVADQLEKNRLPSVHPHHSMLYP K L V E K N 1 0 0 1 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 11 0 1213.6918 O15294 O15294 489 499 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.0012215 155.53 By MS/MS 4.5 0.5 1 1 2 1506900 1506900 0 9792 167 10126 24348;24349 17131 17131 1 43450 0 LVSLIGSK LDSRFVFDRPLPVSRLVSLIGSKTQIPTQR RPLPVSRLVSLIGSKTQIPTQRYGRRPYGV R L V S K T 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 2 0 0 0 1 0 0 8 0 815.51165 P25786 P25786 108 115 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.0070472 129.47 By MS/MS 9 0.816 1 1 1 3 10479000 10479000 0 9793 688 10127 24350;24351;24352 17132 17132 1 846340 0 LVSLYFDTK KSEKRTFLRQALEARLVSLYFDTKRYQEAL QALEARLVSLYFDTKRYQEALHLGSQLLRE R L V T K R 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 1 1 0 1 1 0 0 9 0 1084.5805 O00231 O00231 133 141 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.008925 107.15 By MS/MS 6.5 0.5 1 1 2 1335500 1335500 0 9794 80 10128 24353;24354 17133 17133 1 21308 0 LVSNESQR DLEKLPEFNRLHLQRLVSNESQRRQLVGKL NRLHLQRLVSNESQRRQLVGKLQVLVEEAF R L V Q R R 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 8 0 931.47231 Q5JPH6 Q5JPH6 362 369 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.038055 96.034 By MS/MS By matching 6.33 0.471 2 1 2 1 8369500 8344100 25383 9795 1604 10129 24355;24356;24357 17134 17134 1 69547 77849 LVSPGSANETSSILVESVTR HIVGSPFKAKVTGQRLVSPGSANETSSILV SANETSSILVESVTRSSTETCYSAIPKASS R L V T R S 1 1 1 0 0 0 2 1 0 1 2 0 0 0 1 5 2 0 0 3 0 0 20 0 2045.0641 O75369 O75369 2476 2495 FLNB Filamin-B yes yes 2 0.0014284 97.767 By MS/MS 2.5 0.5 1 1 2 331320 331320 0 9796 300 10130 24358;24359 17135 17135 1 14538 0 LVSSDPEINTK TVHLEKINKMEWWSRLVSSDPEINTKKINP WWSRLVSSDPEINTKKINPENSKLSDLDSE R L V T K K 0 0 1 1 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 1 0 0 11 0 1201.619 Q9Y266 Q9Y266 257 267 NUDC Nuclear migration protein nudC yes yes 2 0.00071536 137.46 By MS/MS 6.5 0.5 1 1 2 22452000 22452000 0 9797 2871 10131 24360;24361 17136 17136 1 376150 0 LVSSDPEINTKK TVHLEKINKMEWWSRLVSSDPEINTKKINP WSRLVSSDPEINTKKINPENSKLSDLDSET R L V K K I 0 0 1 1 0 0 1 0 0 1 1 2 0 0 1 2 1 0 0 1 0 0 12 1 1329.714 Q9Y266 Q9Y266 257 268 NUDC Nuclear migration protein nudC yes yes 2 0.047743 94.409 By MS/MS 6.5 0.5 1 1 2 1157000 1157000 0 9798 2871 10132 24362;24363 17137 17137 1 14623 0 LVTCLESLR QEFIHELKMGSADERLVTCLESLRVSLTSN GSADERLVTCLESLRVSLTSNPVSWVESFG R L V L R V 0 1 0 0 1 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 9 0 1089.5852 Q9NSV4 Q9NSV4 192 200 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.0065693 117.81 By MS/MS 3 0 1 1 884110 884110 0 9799 2628 10133 24364 17138 17138 1 23080 0 LVTDQNISENWR GNICRSPIAEAVFRKLVTDQNISENWRVDS FRKLVTDQNISENWRVDSAATSGYEIGNPP K L V W R V 0 1 2 1 0 1 1 0 0 1 1 0 0 0 0 1 1 1 0 1 0 0 12 0 1473.7212 P24666 P24666 30 41 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 3.3863E-45 289.22 By MS/MS 10 0 1 1 1751100 1751100 0 9800 679 10134 24365 17139 17139 1 1861200 0 LVTEMGTYATQSALSSSR ELKPEEEITVGPVQKLVTEMGTYATQSALS EMGTYATQSALSSSRPTKKEEDRPPLRGFL K L V S R P 2 1 0 0 0 1 1 1 0 0 2 0 1 0 0 4 3 0 1 1 0 0 18 0 1900.92 P53618 P53618 514 531 COPB1 Coatomer subunit beta yes yes 2 9.3179E-34 244.71 By MS/MS 4 0 2 2 1420600 1420600 0 9801 1004 10135;10136 24366;24367 17140;17141 17141 770 2 38781 0 LVTEMGTYATQSALSSSRPTK ELKPEEEITVGPVQKLVTEMGTYATQSALS TYATQSALSSSRPTKKEEDRPPLRGFLLDG K L V T K K 2 1 0 0 0 1 1 1 0 0 2 1 1 0 1 4 4 0 1 1 0 0 21 1 2227.1154 P53618 P53618 514 534 COPB1 Coatomer subunit beta yes yes 3 0.0011696 81.51 By MS/MS By matching 4.33 0.471 2 1 2 1 4830700 4782800 47965 9802 1004 10137 24368;24369;24370 17142 17142 770 1 137690 100230 LVTLPVSFAQLK GRLVNLQHLDLLNNKLVTLPVSFAQLKNLK NNKLVTLPVSFAQLKNLKWLDLKDNPLDPV K L V L K N 1 0 0 0 0 1 0 0 0 0 3 1 0 1 1 1 1 0 0 2 0 0 12 0 1314.7911 Q96AG4 Q96AG4 97 108 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.016332 103.22 By MS/MS 8 0 1 1 289070 289070 0 9803 2121 10138 24371 17143 17143 1 19070 0 LVTMQIWDTAGQER IGADFLTKEVMVDDRLVTMQIWDTAGQERF RLVTMQIWDTAGQERFQSLGVAFYRGADCC R L V E R F 1 1 0 1 0 2 1 1 0 1 1 0 1 0 0 0 2 1 0 1 0 0 14 0 1646.8086 P51149 P51149 56 69 RAB7A Ras-related protein Rab-7a yes yes 2 3.1787E-18 222.73 By MS/MS 9 0 1 1 253830 253830 0 9804 960 10139 24372 17144 17144 725 1 145670 0 LVVDSHVQYR GNAFHLCREVLRLTKLVVDSHVQYRLGNVD LRLTKLVVDSHVQYRLGNVDAFQLADGLQY K L V Y R L 0 1 0 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 3 0 0 10 0 1214.6408 Q6P2Q9 Q6P2Q9 556 565 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0072235 133.57 By MS/MS 2 0 1 1 0 0 0 9805 1706 10140 24373 17145 17145 1 0 0 LVVDVSGSMYR EPQLGSPQQKPKRLRLVVDVSGSMYRFNRM KRLRLVVDVSGSMYRFNRMDGRLERTMEAV R L V Y R F 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 2 0 0 1 3 0 0 11 0 1224.6173 A3KMH1 A3KMH1 1717 1727 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0010769 125.97 By MS/MS 2.5 0.5 1 1 2 650730 650730 0 9806 13 10141 24374;24375 17146 17146 2 1 28376 0 LVVLGSSQESNSK LLTAADVLDLQLPVKLVVLGSSQESNSKVT VKLVVLGSSQESNSKVTADGVIALTRAFLA K L V S K V 0 0 1 0 0 1 1 1 0 0 2 1 0 0 0 4 0 0 0 2 0 0 13 0 1346.7042 Q96AY4 Q96AY4 1620 1632 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.00026728 145.14 By MS/MS 2 0 1 1 267580 267580 0 9807 2125 10142 24376 17147;17148 17147 2 13300 0 LVVPASQCGSLIGK MTNSTAASRPPVTLRLVVPASQCGSLIGKG RLVVPASQCGSLIGKGGCKIKEIRESTGAQ R L V G K G 1 0 0 0 1 1 0 2 0 1 2 1 0 0 1 2 0 0 0 2 0 0 14 0 1427.7806 P57721;Q15366 Q15366 102 115 PCBP3;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 2 0.0045572 105.65 By MS/MS 7.5 0.5 1 1 2 45526000 45526000 0 9808 1491;1055 10143 24377;24378 17149;17150 17150 2 813560 0 LVVPATQCGSLIGK MTNSTAASRPPVTLRLVVPATQCGSLIGKG RLVVPATQCGSLIGKGGCKIKEIRESTGAQ R L V G K G 1 0 0 0 1 1 0 2 0 1 2 1 0 0 1 1 1 0 0 2 0 0 14 0 1441.7963 Q15365 Q15365 102 115 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.0015927 121.21 By MS/MS 8.5 1.12 1 1 1 1 4 18318000 18318000 0 9809 1490 10144 24379;24380;24381;24382 17151;17152 17151 2 715370 0 LVVVDENDVVK LETIINRLVEAEVHRLVVVDENDVVKGIVS EVHRLVVVDENDVVKGIVSLSDILQALVLT R L V V K G 0 0 1 2 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 5 0 0 11 0 1227.6711 P54619 P54619 300 310 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes yes 2 0.00089327 151.22 By MS/MS 7 0 1 1 0 0 0 9810 1015 10145 24383 17153 17153 1 0 0 LVVVELNNR RIVGVDGAIKALCNRLVVVELNNRTSRDLA KALCNRLVVVELNNRTSRDLAEQCVKVLEL R L V N R T 0 1 2 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 3 0 0 9 0 1054.6135 Q9ULT8 Q9ULT8 106 114 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0025412 123.98 By MS/MS 2.5 1.12 1 1 1 1 4 2110400 2110400 0 9811 2826 10146 24384;24385;24386;24387 17154;17155;17156 17156 3 78496 0 LVYAIFLK TVTPDVWYTSKPKEKLVYAIFLKWPTSGQL TSKPKEKLVYAIFLKWPTSGQLFLGHPKAI K L V L K W 1 0 0 0 0 0 0 0 0 1 2 1 0 1 0 0 0 0 1 1 0 0 8 0 965.59499 Q9BTY2 Q9BTY2 394 401 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.0090065 122.15 By MS/MS 6 0 1 1 763830 763830 0 9812 2356 10147 24388 17157 17157 1 5956.3 0 LVYLNEAWK TYVLNFLLLIINYKRLVYLNEAWKRQLQPK IINYKRLVYLNEAWKRQLQPKQD_______ R L V W K R 1 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 1 1 1 0 0 9 0 1134.6073 Q8N0U8 Q8N0U8 160 168 VKORC1L1 Vitamin K epoxide reductase complex subunit 1-like protein 1 yes yes 2 0.03696 100.02 By MS/MS 9 0 1 1 447460 447460 0 9813 1888 10148 24389 17158 17158 1 256800 0 LVYQIIEDAGNK SQNAGKMKGSDNQEKLVYQIIEDAGNKGIW QEKLVYQIIEDAGNKGIWSRDIRYKSNLPL K L V N K G 1 0 1 1 0 1 1 1 0 2 1 1 0 0 0 0 0 0 1 1 0 0 12 0 1361.7191 Q9H1D9 Q9H1D9 94 105 POLR3F DNA-directed RNA polymerase III subunit RPC6 yes yes 2 0.0001682 154.15 By MS/MS 8.5 0.5 1 1 2 743630 743630 0 9814 2465 10149 24390;24391 17159 17159 1 154560 0 LWDFIENR QLSSQGTVRFFNSVRLWDFIENRESRHVPN RFFNSVRLWDFIENRESRHVPNNEDVDMTE R L W N R E 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 8 0 1091.54 Q9H000 Q9H000 378 385 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 2 0.0065765 145.34 By MS/MS 6 0.816 1 1 1 3 1975200 1975200 0 9815 2446 10150 24392;24393;24394 17160 17160 1 35846 0 LWDLTTGTTTR DGQFALSGSWDGTLRLWDLTTGTTTRRFVG GTLRLWDLTTGTTTRRFVGHTKDVLSVAFS R L W T R R 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 5 1 0 0 0 0 11 0 1263.6459 P63244 P63244 89 99 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.00049419 142.98 By MS/MS By matching 8.33 0.471 2 1 2 1 12020000 11964000 56323 9816 1178 10151 24395;24396;24397 17161;17162 17161 2 936210 480500 LWDTDVEYK DSRRMASVSKDGTWKLWDTDVEYKKKQDPY KDGTWKLWDTDVEYKKKQDPYLLKTGRFEE K L W Y K K 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 0 1 1 1 1 0 0 9 0 1167.5448 Q9Y4P3 Q9Y4P3 305 313 TBL2 Transducin beta-like protein 2 yes yes 2 0.0098655 105.1 By MS/MS 7.5 0.5 1 1 2 1615100 1615100 0 9817 2957 10152 24398;24399 17163 17163 1 44838 0 LWGDRYFDPANGK GPAERAKKVEDMMKKLWGDRYFDPANGKFS KKLWGDRYFDPANGKFSKSATSPEGKKLPR K L W G K F 1 1 1 2 0 0 0 2 0 0 1 1 0 1 1 0 0 1 1 0 0 0 13 1 1537.7314 P13639 P13639 260 272 EEF2 Elongation factor 2 yes yes 3 0.017015 76.522 By MS/MS 4.5 0.5 1 1 2 801970 801970 0 9818 576 10153 24400;24401 17164 17164 1 22946 0 LWGLTEMFPER EEDDDEELDETLSERLWGLTEMFPERVRSA LSERLWGLTEMFPERVRSAAGATFDLSLFV R L W E R V 0 1 0 0 0 0 2 1 0 0 2 0 1 1 1 0 1 1 0 0 0 0 11 0 1377.6751 Q9NS69 Q9NS69 48 58 TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes yes 2 6.1666E-05 163.32 By MS/MS 9 0 1 1 241870 241870 0 9819 2620 10154 24402 17165;17166 17166 1549 2 138810 0 LWISYFDGDPK AWELLTQVYGIPEERLWISYFDGDPKAGLD PEERLWISYFDGDPKAGLDPDLETRDIWLS R L W P K A 0 0 0 2 0 0 0 1 0 1 1 1 0 1 1 1 0 1 1 0 0 0 11 0 1339.6449 Q5JTZ9 Q5JTZ9 167 177 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 3.8154E-07 188.87 By MS/MS 4.2 0.748 1 2 2 5 3907800 3907800 0 9820 1611 10155 24403;24404;24405;24406;24407 17167;17168 17168 2 111070 0 LWNTLGVCK DNRQIVSGSRDKTIKLWNTLGVCKYTVQDE RDKTIKLWNTLGVCKYTVQDESHSEWVSCV K L W C K Y 0 0 1 0 1 0 0 1 0 0 2 1 0 0 0 0 1 1 0 1 0 0 9 0 1089.5641 P63244 P63244 131 139 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 2.6802E-07 194.9 By MS/MS By matching 8.33 0.471 2 1 2 1 3002500 2948000 54565 9821 1178 10156 24408;24409;24410 17169 17169 1 221950 465500 LWQTVVGK DGELYASGSEDGTLRLWQTVVGKTYGLWKC SEDGTLRLWQTVVGKTYGLWKCVLPEEDSG R L W G K T 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 1 1 0 2 0 0 8 0 929.53345 Q9Y3F4 Q9Y3F4 291 298 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 0.0038151 143.89 By MS/MS 7.5 0.5 1 1 2 5653000 5653000 0 9822 2937 10157 24411;24412 17170 17170 1 132210 0 LWRENLSK LARTYLPSQVSRVVKLWRENLSKVNQKAAE QVSRVVKLWRENLSKVNQKAAESLADPTEY K L W S K V 0 1 1 0 0 0 1 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 8 1 1044.5716 P35606 P35606 772 779 COPB2 Coatomer subunit beta yes yes 3 0.030758 84.498 By MS/MS 1 0 1 1 209280 209280 0 9823 795 10158 24413 17171 17171 1 10225 0 LWSPDEEVSPEVLAK DLLMNDRSTGEKNGKLWSPDEEVSPEVLAK LWSPDEEVSPEVLAKVQAIKLLVRWLLGMK K L W A K V 1 0 0 1 0 0 3 0 0 0 2 1 0 0 2 2 0 1 0 2 0 0 15 0 1697.8512 Q29RF7 Q29RF7 821 835 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.01832 103.91 By MS/MS 3 0 1 1 704250 704250 0 9824 1556 10159 24414 17172 17172 0 18385 0 LWTLTTR VKTDALPGVLRWQQRLWTLTTRFIEARASG GVLRWQQRLWTLTTRFIEARASGKSPQPQL R L W T R F 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 3 1 0 0 0 0 7 0 889.50215 Q15031 Q15031 695 701 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.022143 120.49 By MS/MS 4.5 0.5 1 1 2 2749200 2749200 0 9825 1467 10160 24415;24416 17173 17173 1 81095 0 LWTLVSEQTR LKRNQSFCPTVNLDKLWTLVSEQTRVNAAK VNLDKLWTLVSEQTRVNAAKNKTGAAPIID K L W T R V 0 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 10 0 1231.6561 P46776 P46776 78 87 RPL27A 60S ribosomal protein L27a yes yes 2 0.00065696 159.79 By MS/MS 9.5 0.5 1 1 2 788460 788460 0 9826 884 10161 24417;24418 17174;17175 17174 2 575390 0 LYAQYFQGDLK AVPLAGFGYGLPISRLYAQYFQGDLKLYSL PISRLYAQYFQGDLKLYSLEGYGTDAVIYI R L Y L K L 1 0 0 1 0 2 0 1 0 0 2 1 0 1 0 0 0 0 2 0 0 0 11 0 1344.6714 Q15118 Q15118 364 374 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 8.8853E-07 201.61 By MS/MS 7 0 1 1 3449700 3449700 0 9827 1479 10162 24419 17176 17176 1 61647 0 LYASLGANDEDIR HDLKHAHELRQAAFKLYASLGANDEDIRKK FKLYASLGANDEDIRKKIIETENMMDRIVT K L Y I R K 2 1 1 2 0 0 1 1 0 1 2 0 0 0 0 1 0 0 1 0 0 0 13 0 1435.6943 Q8IUR7 Q8IUR7 364 376 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 7.8209E-12 186.74 By MS/MS 7 0 1 1 0 0 0 9828 1854 10163 24420 17177 17177 1 0 0 LYAVHQEGNK LAENSGVKANEVISKLYAVHQEGNKNVGLD EVISKLYAVHQEGNKNVGLDIEAEVPAVKD K L Y N K N 1 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1157.5829 P50990 P50990 467 476 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00093084 126.07 By MS/MS By matching 5.78 2.97 1 1 1 2 1 1 1 1 8 1 91348000 91320000 28880 9829 955 10164 24421;24422;24423;24424;24425;24426;24427;24428;24429 17178;17179;17180;17181 17179 4 1232800 88573 LYAVHQEGNKNVGLDIEAEVPAVK LAENSGVKANEVISKLYAVHQEGNKNVGLD KNVGLDIEAEVPAVKDMLEAGILDTYLGKY K L Y V K D 3 0 2 1 0 1 3 2 1 1 2 2 0 0 1 0 0 0 1 4 0 0 24 1 2592.3548 P50990 P50990 467 490 CCT8 T-complex protein 1 subunit theta yes yes 3;4 2.2819E-06 106.23 By MS/MS 6 0 2 2 27622000 27622000 0 9830 955 10165 24430;24431 17182;17183 17182 2 215400 0 LYCEKENDPK TRELSNFYFSIIKDRLYCEKENDPKRRSCQ IIKDRLYCEKENDPKRRSCQTALVEILDVI R L Y P K R 0 0 1 1 1 0 2 0 0 0 1 2 0 0 1 0 0 0 1 0 0 0 10 1 1294.5864 Q9NSE4 Q9NSE4 806 815 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0029432 148.94 By MS/MS 4 0 1 1 1017900 1017900 0 9831 2624 10166 24432 17184 17184 1 27787 0 LYCIYVAIGQK INQKRFNDGSDEKKKLYCIYVAIGQKRSTV EKKKLYCIYVAIGQKRSTVAQLVKRLTDAD K L Y Q K R 1 0 0 0 1 1 0 1 0 2 1 1 0 0 0 0 0 0 2 1 0 0 11 0 1326.7006 P25705 P25705 242 252 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00056804 163.67 By MS/MS 6 0 1 1 3196900 3196900 0 9832 687 10167 24433 17185 17185 1 24929 0 LYCPVEFSK NLTEALSLYEEQLGRLYCPVEFSKEIVCVP EEQLGRLYCPVEFSKEIVCVPSYLELWVFY R L Y S K E 0 0 0 0 1 0 1 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 9 0 1141.5478 P52788 P52788 335 343 SMS Spermine synthase yes yes 2 0.020824 101.54 By MS/MS 7 0 1 1 0 0 0 9833 991 10168 24434 17186 17186 1 0 0 LYDFYLFK EQTENPENPLRCPIKLYDFYLFKCPQSVKG PLRCPIKLYDFYLFKCPQSVKGRNDTFYLT K L Y F K C 0 0 0 1 0 0 0 0 0 0 2 1 0 2 0 0 0 0 2 0 0 0 8 0 1107.5641 Q2TAL8 Q2TAL8 705 712 QRICH1 Glutamine-rich protein 1 yes yes 2 0.024687 101.28 By MS/MS 4 0 1 1 199570 199570 0 9834 1562 10169 24435 17187 17187 1 5447.9 0 LYDILGVPPGASENELK ______________________________ DILGVPPGASENELKKAYRKLAKEYHPDKN K L Y L K K 1 0 1 1 0 0 2 2 0 1 3 1 0 0 2 1 0 0 1 1 0 0 17 0 1813.9462 O60884 O60884 9 25 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.040396 82.85 By MS/MS 7 0 1 1 833950 833950 0 9835 273 10170 24436 17188 17188 1 14903 0 LYDILGVPPGASENELKK ______________________________ ILGVPPGASENELKKAYRKLAKEYHPDKNP K L Y K K A 1 0 1 1 0 0 2 2 0 1 3 2 0 0 2 1 0 0 1 1 0 0 18 1 1942.0411 O60884 O60884 9 26 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 3 0.0022631 103.13 By MS/MS 7 0.816 1 1 1 3 8527700 8527700 0 9836 273 10171 24437;24438;24439 17189;17190;17191 17191 3 130440 0 LYDNLLEQNLIR AELRDDPIISTHLAKLYDNLLEQNLIRVIE LAKLYDNLLEQNLIRVIEPFSRVQIEHISS K L Y I R V 0 1 2 1 0 1 1 0 0 1 4 0 0 0 0 0 0 0 1 0 0 0 12 0 1502.8093 O00231 O00231 326 337 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 7.2201E-33 257.09 By MS/MS 7.67 1.7 1 1 1 3 16908000 16908000 0 9837 80 10172 24440;24441;24442 17192;17193;17194;17195 17193 4 319540 0 LYDSAFHPDTGEK VPPGTQVEQLLYAKKLYDSAFHPDTGEKMN KKLYDSAFHPDTGEKMNVIGRMSFQLPGGM K L Y E K M 1 0 0 2 0 0 1 1 1 0 1 1 0 1 1 1 1 0 1 0 0 0 13 0 1478.6678 Q96NB2 Q96NB2 73 85 SFXN2 Sideroflexin-2 yes yes 2 0.0036396 110.84 By MS/MS 8 0 1 1 1439200 1439200 0 9838 2231 10173 24443 17196 17196 1 94944 0 LYEAGLAYQK CLPDYYKWTQYLFIKLYEAGLAYQKEALVN YLFIKLYEAGLAYQKEALVNWDPVDQTVLA K L Y Q K E 2 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1154.5972 Q15031 Q15031 192 201 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 2.0383E-10 198.65 By MS/MS 5.67 1.7 1 1 1 3 8544600 8544600 0 9839 1467 10174 24444;24445;24446 17197;17198;17199 17197 3 271660 0 LYEEGSNKR KDGVVFGVEKLVLSKLYEEGSNKRLFNVDR KLVLSKLYEEGSNKRLFNVDRHVGMAVAGL K L Y K R L 0 1 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 9 1 1094.5356 P25788 P25788 58 66 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.0013366 137.14 By MS/MS By matching 8 0 2 1 1 4487500 4468000 19505 9840 690 10175 24447;24448 17200 17200 1 294750 166400 LYEFIVR HPTKYTNNLQGDEQRLYEFIVRHFLACCSQ NLQGDEQRLYEFIVRHFLACCSQDAQGQET R L Y V R H 0 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 7 0 938.52255 Q13472 Q13472 433 439 TOP3A DNA topoisomerase 3-alpha yes yes 2 0.021851 121.29 By MS/MS 4 0 1 1 275270 275270 0 9841 1374 10176 24449 17201 17201 1 7514.5 0 LYEIGAGTSEVR YINDFPMGRFLRDAKLYEIGAGTSEVRRLV DAKLYEIGAGTSEVRRLVIGRAFNADFH__ K L Y V R R 1 1 0 0 0 0 2 2 0 1 1 0 0 0 0 1 1 0 1 1 0 0 12 0 1293.6565 P26440 P26440 402 413 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 7.3584E-05 185.33 By MS/MS 7 0 1 1 2046100 2046100 0 9842 696 10177 24450 17202 17202 1 36563 0 LYEIGAGTSEVRR YINDFPMGRFLRDAKLYEIGAGTSEVRRLV AKLYEIGAGTSEVRRLVIGRAFNADFH___ K L Y R R L 1 2 0 0 0 0 2 2 0 1 1 0 0 0 0 1 1 0 1 1 0 0 13 1 1449.7576 P26440 P26440 402 414 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.042997 90.15 By MS/MS 7 0 1 1 1356100 1356100 0 9843 696 10178 24451 17203 17203 1 24234 0 LYELDGLR EDAFHFVSYVPVNGRLYELDGLREGPIDLG YVPVNGRLYELDGLREGPIDLGACNQDDWI R L Y L R E 0 1 0 1 0 0 1 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 8 0 977.5182 Q9Y5K5 Q9Y5K5 175 182 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 2 0.019586 107.29 By MS/MS 7.5 0.5 1 1 2 1715900 1715900 0 9844 2971 10179 24452;24453 17204 17204 1 68857 0 LYELIITR MRMAIESAGFKLNKKLYELIITRYSEPDLA GFKLNKKLYELIITRYSEPDLAVDFDNFVC K L Y T R Y 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 1 0 1 0 0 0 8 0 1019.6015 P07384 P07384 655 662 CAPN1 Calpain-1 catalytic subunit yes yes 2 0.023957 101.64 By MS/MS 5 0 1 1 320860 320860 0 9845 489 10180 24454 17205 17205 1 13188 0 LYENFISEFEHR FVQDPCFAQGDGLIKLYENFISEFEHRVNP LIKLYENFISEFEHRVNPLSLVEIILHVVR K L Y H R V 0 1 1 0 0 0 3 0 1 1 1 0 0 2 0 1 0 0 1 0 0 0 12 0 1582.7416 Q9UNM6 Q9UNM6 59 70 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 3 0.037396 74.78 By MS/MS 7 0 1 1 814070 814070 0 9846 2845 10181 24455 17206 17206 1 14548 0 LYFCVDR AGGTGGKGKSGGRFRLYFCVDRGATKECKE GKSGGRFRLYFCVDRGATKECKEAKEVKDA R L Y D R G 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 971.45349 O14654 O14654 655 661 IRS4 Insulin receptor substrate 4 yes yes 2 0.040889 107.43 By MS/MS 3.5 0.5 1 1 2 1098800 1098800 0 9847 118 10182 24456;24457 17207 17207 1 28968 0 LYGFTENR VLVAEEEAARVALRKLYGFTENRRPWNYSK ARVALRKLYGFTENRRPWNYSKPKETLRAE K L Y N R R 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 8 0 998.48214 Q9H9J2 Q9H9J2 304 311 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.0056149 134.81 By MS/MS 8 0 1 1 2382400 2382400 0 9848 2535 10183 24458 17208 17208 1 157170 0 LYGIQAFCK ENLRQRSQKLVEEAKLYGIQAFCKDLLEVA LVEEAKLYGIQAFCKDLLEVADVLEKATQC K L Y C K D 1 0 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 9 0 1098.5532 Q9HAV7 Q9HAV7 101 109 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.0025685 123.69 By MS/MS 9 0 1 1 496330 496330 0 9849 2547 10184 24459 17209 17209 1 284850 0 LYGPSSVSFADDFVR SNSTARNVTWKLGSRLYGPSSVSFADDFVR LYGPSSVSFADDFVRSSKQHYNCEHSKINF R L Y V R S 1 1 0 2 0 0 0 1 0 0 1 0 0 2 1 3 0 0 1 2 0 0 15 0 1658.794 P50454 P50454 134 148 SERPINH1 Serpin H1 yes yes 2 1.2727E-20 223.77 By MS/MS 6.67 0.471 1 2 3 19702000 19702000 0 9850 947 10185 24460;24461;24462 17210;17211 17210 2 187120 0 LYGSAGPPPTGEEDTAEKDEL KKKELEEIVQPIISKLYGSAGPPPTGEEDT PPPTGEEDTAEKDEL_______________ K L Y E L - 2 0 0 2 0 0 4 3 0 0 2 1 0 0 3 1 2 0 1 0 0 0 21 1 2174.9855 P11021 P11021 634 654 HSPA5 78 kDa glucose-regulated protein yes yes 2 1.1939E-30 218.21 By MS/MS 6 1.41 1 1 1 1 1 5 22244000 22244000 0 9851 545 10186 24463;24464;24465;24466;24467 17212;17213;17214 17212 3 871720 0 LYHDIAQQAFK RQCLDLLRNNSRVERLYHDIAQQAFKFCLQ RVERLYHDIAQQAFKFCLQYTRKAEFRKLC R L Y F K F 2 0 0 1 0 2 0 0 1 1 1 1 0 1 0 0 0 0 1 0 0 0 11 0 1332.6826 Q14152 Q14152 173 183 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00027667 151.83 By MS/MS 3.5 0.5 1 1 2 11828000 11828000 0 9852 1409 10187 24468;24469 17215;17216 17215 2 309730 0 LYHEATTDTYK TPVLLHFITKGYVIRLYHEATTDTYKAITY YVIRLYHEATTDTYKAITYNAMLAETSTVF R L Y Y K A 1 0 0 1 0 0 1 0 1 0 1 1 0 0 0 0 3 0 2 0 0 0 11 0 1340.6248 Q9BUB7 Q9BUB7 170 180 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2;3 1.2451E-10 200.6 By MS/MS 9.5 0.5 2 2 4 8519400 8519400 0 9853 2361 10188 24470;24471;24472;24473 17217;17218;17219;17220 17218 4 5077100 0 LYHNEVEIEK KDEVVRAQVQLQLFKLYHNEVEIEKLNKEL LQLFKLYHNEVEIEKLNKELASKNKEIEKD K L Y E K L 0 0 1 0 0 0 3 0 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1272.635 Q14683 Q14683 228 237 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 0.00040361 133.75 By MS/MS 3 0 2 2 2149200 2149200 0 9854 1440 10189 24474;24475 17221;17222 17222 2 56106 0 LYIGNLNESVTPADLEK ______________________________ IGNLNESVTPADLEKVFAEHKISYSGQFLV K L Y E K V 1 0 2 1 0 0 2 1 0 1 3 1 0 0 1 1 1 0 1 1 0 0 17 0 1874.9626 Q9NZI8 Q9NZI8 4 20 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 9.8809E-34 247.73 By MS/MS 5 0 1 1 2513800 2513800 0 9855 2711 10190 24476 17223 17223 1 103330 0 LYILFAAPPEK DPEEVVEQYGIDTIRLYILFAAPPEKDILW DTIRLYILFAAPPEKDILWDVKTDALPGVL R L Y E K D 2 0 0 0 0 0 1 0 0 1 2 1 0 1 2 0 0 0 1 0 0 0 11 0 1260.7118 Q15031 Q15031 664 674 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0058416 104.2 By MS/MS 4.5 0.5 1 1 2 288210 288210 0 9856 1467 10191 24477;24478 17224 17224 1 8360.3 0 LYKDDQLLDDGK RIVEGILKRPPDEQRLYKDDQLLDDGKTLG EQRLYKDDQLLDDGKTLGECGFTSQTARPQ R L Y G K T 0 0 0 4 0 1 0 1 0 0 3 2 0 0 0 0 0 0 1 0 0 0 12 1 1421.7038 Q15370 Q15370 44 55 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2;3 0.0026735 139.76 By MS/MS 10 0 2 2 1445800 1445800 0 9857 1492 10192 24479;24480 17225;17226 17225 2 1536700 0 LYLEREEYGK KNDRLWFKTNTKLGKLYLEREEYGKLQKIL TKLGKLYLEREEYGKLQKILRQLHQSCQTD K L Y G K L 0 1 0 0 0 0 3 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 1 1298.6507 P61201 P61201 158 167 COPS2 COP9 signalosome complex subunit 2 yes yes 2 0.036178 107.79 By MS/MS 6 0 1 1 3186600 3186600 0 9858 1092 10193 24481 17227 17227 1 24849 0 LYLINSPVVR DPVSIIQKYGADALRLYLINSPVVRAENLR ADALRLYLINSPVVRAENLRFKEEGVRDVL R L Y V R A 0 1 1 0 0 0 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 10 0 1172.6917 P41252 P41252 625 634 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 1.291E-10 204.42 By MS/MS 3 1.41 1 1 1 1 1 5 10087000 10087000 0 9859 840 10194 24482;24483;24484;24485;24486 17228;17229;17230;17231 17229 3 274080 0 LYLIQMIPR ENPKRRELLDQLQQKLYLIQMIPRQNLFTK DQLQQKLYLIQMIPRQNLFTKNLTPMNYNI K L Y P R Q 0 1 0 0 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 0 9 0 1145.6631 Q9H5Q4 Q9H5Q4 296 304 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 2 0.0015682 126.67 By MS/MS 7 0 1 1 365400 365400 0 9860 2505 10195 24487 17232 17232 1525 1 6529.7 0 LYLQPWPVDVK SYPPPLKHLCRVAIRLYLQPWPVDVKVKAL VAIRLYLQPWPVDVKVKALPLPDRLKWYLL R L Y V K V 0 0 0 1 0 1 0 0 0 0 2 1 0 0 2 0 0 1 1 2 0 0 11 0 1356.7442 Q9NWX5 Q9NWX5 385 395 ASB6 Ankyrin repeat and SOCS box protein 6 yes yes 2 0.0040662 111.65 By MS/MS 7 0 1 1 161320 161320 0 9861 2674 10196 24488 17233 17233 1 2882.8 0 LYLVDLAGSEK VKQENTQTEQKLSGKLYLVDLAGSEKVSKT LSGKLYLVDLAGSEKVSKTGAEGAVLDEAK K L Y E K V 1 0 0 1 0 0 1 1 0 0 3 1 0 0 0 1 0 0 1 1 0 0 11 0 1206.6496 P33176;Q12840;O60282 P33176 227 237 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 2.8781E-05 172.59 By MS/MS By MS/MS 4.33 0.471 2 1 2 1 5219600 5189600 30016 9862 767 10197 24489;24490;24491 17234;17235 17235 2 142860 62721 LYNLFLK FVGPLKSQAADQITKLYNLFLKIDATQVEV QAADQITKLYNLFLKIDATQVEVNPFGETP K L Y L K I 0 0 1 0 0 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 7 0 909.53239 Q96I99 Q96I99 228 234 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 0.025579 118.01 By MS/MS 7 0 1 1 435940 435940 0 9863 2200 10198 24492 17236 17236 1 7790.4 0 LYNVVVDTEVTGK DTSATTALELVAGERLYNVVVDTEVTGKKL ERLYNVVVDTEVTGKKLLERGELKRRYTII R L Y G K K 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 0 2 0 1 4 0 0 13 0 1435.7559 O95347 O95347 549 561 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 1.2375E-11 199.82 By MS/MS 3.5 0.5 1 1 2 1570600 1570600 0 9864 385 10199 24493;24494 17237 17237 1 41177 0 LYPAVDEQETPLPR ALNEQEKELQRRLKRLYPAVDEQETPLPRS RLYPAVDEQETPLPRSWSPKDKFSYIGLSQ R L Y P R S 1 1 0 1 0 1 2 0 0 0 2 0 0 0 3 0 1 0 1 1 0 0 14 0 1626.8253 Q96S59 Q96S59 154 167 RANBP9 Ran-binding protein 9 yes yes 2 3.6352E-05 185.3 By MS/MS By matching 4.33 0.471 2 1 2 1 4003400 3954900 48543 9865 2254 10200 24495;24496;24497 17238 17238 1 116710 101440 LYPAVNQQETPLPR LPSPGEQELSRRLQRLYPAVNQQETPLPRS RLYPAVNQQETPLPRSWSPKDKYNYIGLSQ R L Y P R S 1 1 1 0 0 2 1 0 0 0 2 0 0 0 3 0 1 0 1 1 0 0 14 0 1624.8573 Q6VN20 Q6VN20 42 55 RANBP10 Ran-binding protein 10 yes yes 2 1.4203E-05 164.9 By MS/MS 5 0 1 1 2214900 2214900 0 9866 1734 10201 24498 17239 17239 1 91043 0 LYPEGLAQLAR LSKEDRAKLFPHCGRLYPEGLAQLARADDY HCGRLYPEGLAQLARADDYEQVKNVADYYP R L Y A R A 2 1 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 0 1 0 0 0 11 0 1229.6768 P61421 P61421 247 257 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 2 0.0019237 125.71 By MS/MS 7.5 0.5 1 1 2 2968900 2968900 0 9867 1099 10202 24499;24500 17240 17240 1 93542 0 LYPPSAEYPDLR LLRPEPVRAASERRRLYPPSAEYPDLRKHN RRRLYPPSAEYPDLRKHNNCMASHLTPAVY R L Y L R K 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 1 0 0 2 0 0 0 12 0 1419.7034 P12532 P12532 46 57 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.039977 77.533 By MS/MS 7 0 1 1 3429600 3429600 0 9868 566 10203 24501 17241 17241 1 61288 0 LYPTVGKPSSS IDRSVDFLLDSSLRKLYPTVGKPSSS____ SLRKLYPTVGKPSSS_______________ K L Y S S - 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 3 1 0 1 1 0 0 11 1 1134.5921 Q9UDX5 Q9UDX5 156 166 MTFP1 Mitochondrial fission process protein 1 yes yes 2 0.010173 128.6 By MS/MS 9 0 1 1 2812400 2812400 0 9869 2763 10204 24502 17242 17242 1 1614100 0 LYQECEK KYKLDAKSKIRALLRLYQECEKLKKLMSSN SKIRALLRLYQECEKLKKLMSSNSTDLPLN R L Y E K L 0 0 0 0 1 1 2 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 968.42733 O95757;Q92598 Q92598 266 272 HSPA4L;HSPH1 Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa no no 2 0.020039 126.28 By MS/MS 4 0 1 1 681150 681150 0 9870 2063;405 10205 24503 17243 17243 1 18595 0 LYQEFGIR SGESKYTGTLDCAKKLYQEFGIRGIYKGTV TLDCAKKLYQEFGIRGIYKGTVLTLMRDVP K L Y I R G 0 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 1 0 0 0 8 0 1024.5342 O43772 O43772 159 166 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0059442 133.58 By MS/MS 8 0.816 1 1 1 3 4032100 4032100 0 9871 222 10206 24504;24505;24506 17244 17244 1 406490 0 LYQEMFAWK QVIYLNPPIEECRYKLYQEMFAWKMVVLSL EECRYKLYQEMFAWKMVVLSLPRIQSQRYQ K L Y W K M 1 0 0 0 0 1 1 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 9 0 1214.5794 Q14204 Q14204 982 990 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0097096 100.02 By MS/MS 1 0 1 1 164230 164230 0 9872 1421 10207 24507 17245 17245 1109 1 8023.9 0 LYQFIEPFEEK YHLRQYTEAISVGEKLYQFIEPFEEKFAQA VGEKLYQFIEPFEEKFAQAVCFLLVDLYIL K L Y E K F 0 0 0 0 0 1 3 0 0 1 1 1 0 2 1 0 0 0 1 0 0 0 11 0 1441.7129 Q9H9A5 Q9H9A5 136 146 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 2 0.0043021 110.66 By MS/MS 5 0 1 1 140400 140400 0 9873 2531 10208 24508 17246 17246 1 5770.9 0 LYQGHLQEESGPPPESMPK NWKQPPERELSRLRRLYQGHLQEESGPPPE HLQEESGPPPESMPKMPPRTPAEASSTGQT R L Y P K M 0 0 0 0 0 2 3 2 1 0 2 1 1 0 4 2 0 0 1 0 0 0 19 0 2122.9994 Q9Y676 Q9Y676 219 237 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 3 0.0088958 74.618 By MS/MS 8 0 1 1 374680 374680 0 9874 2995 10209 24509 17247 17247 1721 1 24717 0 LYQTDPSGTYHAWK ISALIVGFDFDGTPRLYQTDPSGTYHAWKA RLYQTDPSGTYHAWKANAIGRGAKSVREFL R L Y W K A 1 0 0 1 0 1 0 1 1 0 1 1 0 0 1 1 2 1 2 0 0 0 14 0 1665.7787 O14818;Q8TAA3 O14818 144 157 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 2;3 9.7441E-05 160.67 By MS/MS 8 0 2 2 2684200 2684200 0 9875 129 10210 24510;24511 17248;17249 17249 2 177080 0 LYQYMLNAGLAK KLREELGLCERTFKRLYQYMLNAGLAKVVS FKRLYQYMLNAGLAKVVSLRLQEIHPECGP R L Y A K V 2 0 1 0 0 1 0 1 0 0 3 1 1 0 0 0 0 0 2 0 0 0 12 0 1383.7221 Q12789 Q12789 293 304 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.00034464 138.98 By MS/MS 2 0 1 1 148570 148570 0 9876 1306 10211 24512 17250 17250 1041 1 7384.6 0 LYRKEVLEK ILLRPGASDLTGSFRLYRKEVLEKLIEKCV LTGSFRLYRKEVLEKLIEKCVSKGYVFQME R L Y E K L 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 1 1 0 0 9 2 1176.6867 O60762 O60762 189 197 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 3 0.001804 122.96 By MS/MS 8.5 0.5 1 1 2 3855500 3855500 0 9877 263 10212 24513;24514 17251 17251 1 292380 0 LYRPGSVAYVSR IGNTGGMLDNILASKLYRPGSVAYVSRSGG ASKLYRPGSVAYVSRSGGMSNELNNIISRT K L Y S R S 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 2 2 0 0 12 1 1366.7357 P53396 P53396 651 662 ACLY ATP-citrate synthase yes yes 2 0.026081 113.44 By MS/MS 3.5 0.5 1 1 2 2173600 2173600 0 9878 1001 10213 24515;24516 17252 17252 1 59135 0 LYSEDELPAEFK IHANCRIRRVYFSDRLYSEDELPAEFKLYL SDRLYSEDELPAEFKLYLPVQNKAKQ____ R L Y F K L 1 0 0 1 0 0 3 0 0 0 2 1 0 1 1 1 0 0 1 0 0 0 12 0 1439.682 Q9Y6A4 Q9Y6A4 171 182 CFAP20 Cilia- and flagella-associated protein 20 yes yes 2 1.4927E-16 221.5 By MS/MS 9 0 1 1 749120 749120 0 9879 2999 10214 24517 17253 17253 1 429930 0 LYSILGTTLKDEGK GGDTVAIGGVDGNVRLYSILGTTLKDEGKL RLYSILGTTLKDEGKLLEAKGPVTDVAYSH R L Y G K L 0 0 0 1 0 0 1 2 0 1 3 2 0 0 0 1 2 0 1 0 0 0 14 1 1536.8399 O75083 O75083 471 484 WDR1 WD repeat-containing protein 1 yes yes 2 4.5599E-05 171.67 By MS/MS 6 0 1 1 1916000 1916000 0 9880 277 10215 24518 17254 17254 1 14941 0 LYSLALHPNAFK QQEKSPVNTKSLFKRLYSLALHPNAFKRLG FKRLYSLALHPNAFKRLGASLAFNNIYREF R L Y F K R 2 0 1 0 0 0 0 0 1 0 3 1 0 1 1 1 0 0 1 0 0 0 12 0 1372.7503 P78527 P78527 1063 1074 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0005934 137.95 By MS/MS 1 0 1 1 179040 179040 0 9881 1197 10216 24519 17255 17255 1 8747.6 0 LYSLFLK FPPNIVESAAENMVKLYSLFLKYDATMIEI SAAENMVKLYSLFLKYDATMIEINPMVEDS K L Y L K Y 0 0 0 0 0 0 0 0 0 0 3 1 0 1 0 1 0 0 1 0 0 0 7 0 882.52149 Q9P2R7 Q9P2R7 243 249 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.012142 148.07 By MS/MS 7 0.816 1 1 1 3 2051700 2051700 0 9882 2741 10217 24520;24521;24522 17256 17256 1 36568 0 LYSLGNGR GGSRGEEVGELSRGKLYSLGNGRWMLTLAK GELSRGKLYSLGNGRWMLTLAKNMEVRAIF K L Y G R W 0 1 1 0 0 0 0 2 0 0 2 0 0 0 0 1 0 0 1 0 0 0 8 0 878.46102 P09543 P09543 372 379 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.013795 114.78 By MS/MS 6.5 0.5 1 1 2 1498200 1498200 0 9883 516 10218 24523;24524 17257 17257 1 22123 0 LYSLLSDPIPEVR DSARWCGVRDSAHEKLYSLLSDPIPEVRCA EKLYSLLSDPIPEVRCAAVFALGTFVGNSA K L Y V R C 0 1 0 1 0 0 1 0 0 1 3 0 0 0 2 2 0 0 1 1 0 0 13 0 1500.8188 Q8N122 Q8N122 604 616 RPTOR Regulatory-associated protein of mTOR yes yes 2 3.5226E-05 163.9 By MS/MS 4.5 1.12 1 1 1 1 4 2154800 2154800 0 9884 1891 10219 24525;24526;24527;24528 17258 17258 1 78082 0 LYSPSQIGAFVLMK VRASNGDAWVEAHGKLYSPSQIGAFVLMKM KLYSPSQIGAFVLMKMKETAENYLGHTAKN K L Y M K M 1 0 0 0 0 1 0 1 0 1 2 1 1 1 1 2 0 0 1 1 0 0 14 0 1552.8323 P38646 P38646 160 173 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0016088 115.29 By MS/MS 5.5 0.5 1 1 2 874150 874150 0 9885 820 10220 24529;24530 17259 17259 566 1 16614 0 LYSSSGPELR LRTQLSVRVNAILEKLYSSSGPELRRSLFS AILEKLYSSSGPELRRSLFSLKQIFQEDKD K L Y L R R 0 1 0 0 0 0 1 1 0 0 2 0 0 0 1 3 0 0 1 0 0 0 10 0 1107.556 Q9Y613 Q9Y613 127 136 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.00082216 131.11 By MS/MS 3 0 1 1 902770 902770 0 9886 2993 10221 24531 17260;17261 17260 2 23567 0 LYTEGYQVPPGATYTAIEAPK AEMKTSMESLIHHFKLYTEGYQVPPGATYT QVPPGATYTAIEAPKGEFGVYLVSDGSSRP K L Y P K G 3 0 0 0 0 1 2 2 0 1 1 1 0 0 3 0 3 0 3 1 0 0 21 0 2268.1314 O75306 O75306 384 404 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.001692 92.8 By MS/MS 7 0 1 1 3080400 3080400 0 9887 294 10222 24532 17262 17262 1 55048 0 LYTLQDK RVTAIHIDPATHRQKLYTLQDKAQVADVVV DPATHRQKLYTLQDKAQVADVVVSRWLRVT K L Y D K A 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 7 0 879.47018 P49327 P49327 1066 1072 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.012408 147.34 By MS/MS 3.14 1.25 1 1 2 2 1 7 16324000 16324000 0 9888 915 10223 24533;24534;24535;24536;24537;24538;24539 17263;17264;17265 17263 3 671550 0 LYTLQDKAQVADVVVSR RVTAIHIDPATHRQKLYTLQDKAQVADVVV TLQDKAQVADVVVSRWLRVTVAGGVHISGL K L Y S R W 2 1 0 2 0 2 0 0 0 0 2 1 0 0 0 1 1 0 1 4 0 0 17 1 1904.0367 P49327 P49327 1066 1082 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.0049704 79.013 By MS/MS 2 0 1 1 473490 473490 0 9889 915 10224 24540 17266 17266 1 23535 0 LYTPSGNIVPR GNLALRSLLGKDGEKLYTPSGNIVPRHLFR DGEKLYTPSGNIVPRHLFRIKHLPYTTRRD K L Y P R H 0 1 1 0 0 0 0 1 0 1 1 0 0 0 2 1 1 0 1 1 0 0 11 0 1215.6612 Q53S58 Q53S58 271 281 TMEM177 Transmembrane protein 177 yes yes 2 0.013151 95.523 By MS/MS By matching 4.75 3.27 1 1 2 3 1 5658100 5646600 11469 9890 1591 10225 24541;24542;24543;24544 17267;17268 17267 2 361690 97841 LYTTMPVAK VQQQAQLSTIRSFLKLYTTMPVAKLAGFLD IRSFLKLYTTMPVAKLAGFLDLTEQEFRIQ K L Y A K L 1 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 2 0 1 1 0 0 9 0 1022.5471 Q9Y262 Q9Y262 466 474 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.019593 91.853 By MS/MS 4.14 1.81 1 1 1 2 2 7 8533800 8533800 0 9891 2868 10226;10227 24545;24546;24547;24548;24549;24550;24551 17269;17270;17271 17269 1658 3 197680 0 MAAAGARLSPGPGSGLRGR ______________________________ GARLSPGPGSGLRGRPRLCFHPGPPPLLPL - M A G R P 4 3 0 0 0 0 0 5 0 0 2 0 1 0 2 2 0 0 0 0 0 0 19 2 1780.9479 O75129 O75129 1 19 ASTN2 Astrotactin-2 yes yes 4 0.034694 47.548 By MS/MS 7 0 1 1 1051000 1051000 0 9892 281 10228 24552 17272 17272 156 0 18782 0 MAAASSPPR ______________________________ ______________________________ - M A P R A 3 1 0 0 0 0 0 0 0 0 0 0 1 0 2 2 0 0 0 0 0 0 9 0 886.43309 P51787 P51787 1 9 KCNQ1 Potassium voltage-gated channel subfamily KQT member 1 yes yes 2 0.04981 50.127 By MS/MS 4 0 1 1 70120 70120 0 9893 977 10229 24553 17273 17273 0 1914.2 0 MAALVYYGFR GLPKAAIVVHSRYYRMAALVYYGFRMRPND SRYYRMAALVYYGFRMRPNDIVYDCLPLYH R M A F R M 2 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 2 1 0 0 10 0 1189.5954 Q6P1M0 Q6P1M0 266 275 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.0014469 116.88 By MS/MS 2 0.816 1 1 1 3 382060 382060 0 9894 1701 10230 24554;24555;24556 17274 17274 1219 1 17573 0 MAAQIIGNMYSLTDQK IVQRAFQDRSTDTRKMAAQIIGNMYSLTDQ AAQIIGNMYSLTDQKDLAPYLPSVTPGLKA K M A Q K D 2 0 1 1 0 2 0 1 0 2 1 1 2 0 0 1 1 0 1 0 0 0 16 0 1782.8644 Q92616 Q92616 1634 1649 GCN1L1 Translational activator GCN1 yes yes 2 1.2624E-15 209.19 By MS/MS 2 0 1 1 569420 569420 0 9895 2068 10231 24557 17275;17276 17275 1349;1350 2 28303 0 MAATDFVQEMR ______________________________ ______________________________ - M A M R A 2 1 0 1 0 1 1 0 0 0 0 0 2 1 0 0 1 0 0 1 0 0 11 0 1297.5795 Q71RC9 Q71RC9 1 11 SMIM5 Small integral membrane protein 5 yes yes 2 0.039236 58.981 By MS/MS 1 0 1 1 168490 168490 0 9896 1753 10232 24558 17277 17277 1239 1 8232.2 0 MAATFIGNSTAIQELFK NVKTAVCDIPPRGLKMAATFIGNSTAIQEL ATFIGNSTAIQELFKRISEQFTAMFRRKAF K M A F K R 3 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 0 0 0 17 0 1840.9393 P04350 P04350 363 379 TUBB4A Tubulin beta-4A chain yes yes 2 7.5831E-25 217.2 By MS/MS 6 0 2 2 2341600 2341600 0 9897 451 10233;10234 24559;24560 17278;17279 17279 238 2 18260 0 MADFWLTEK IDYGKLGDTNERAMRMADFWLTEKDLIPKL NERAMRMADFWLTEKDLIPKLFQVLAPRYK R M A E K D 1 0 0 1 0 0 1 0 0 0 1 1 1 1 0 0 1 1 0 0 0 0 9 0 1139.5321 Q9NRX2 Q9NRX2 75 83 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.001265 131.44 By MS/MS 9 0 1 1 653120 653120 0 9898 2614 10235 24561 17280 17280 1547 1 374830 0 MADGVANVEHILK NSNIILLGDSQGDLRMADGVANVEHILKIG LRMADGVANVEHILKIGYLNDRVDELLEKY R M A L K I 2 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 0 2 0 0 13 0 1395.718 Q9H0P0 Q9H0P0 284 296 NT5C3A Cytosolic 5-nucleotidase 3A yes yes 3 0.0024267 110.15 By MS/MS 7.5 0.5 1 1 2 1374700 1374700 0 9899 2455 10236 24562;24563 17281 17281 1503 1 31073 0 MADLSELLK EKKNSGALEKENQMRMADLSELLKEGTKEA KENQMRMADLSELLKEGTKEAHDRAENTQF R M A L K E 1 0 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 0 0 0 0 9 0 1018.5369 P30519 P30519 30 38 HMOX2 Heme oxygenase 2 yes yes 2 0.0059375 107.69 By MS/MS 7.5 0.5 1 1 2 898150 898150 0 9900 741 10237 24564;24565 17282 17282 500 1 46205 0 MAEAELVQEGK RKGHILELLTEVTRRMAEAELVQEGKARKT VTRRMAEAELVQEGKARKTNPEIQSTLRKR R M A G K A 2 0 0 0 0 1 3 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1203.5805 P31944 P31944 213 223 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 2 0.0015187 126.71 By matching By MS/MS 3.57 1.5 1 1 1 1 3 1 6 568360 250970 317390 9901 759 10238;10239 24566;24567;24568;24569;24570;24571;24572 17283;17284;17285;17286 17286 511 4 10316 497730 MAEIGEHVAPSEAANSLEQAQAAAER ETIELTEDRRAFAARMAEIGEHVAPSEAAN EAANSLEQAQAAAERLGYPVLVRAAFALGG R M A E R L 8 1 1 0 0 2 5 1 1 1 1 0 1 0 1 2 0 0 0 1 0 0 26 0 2679.2559 P27708 P27708 522 547 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 3 7.4865E-09 114.21 By MS/MS 2.5 1.12 1 1 1 1 4 2567500 2567500 0 9902 709 10240 24573;24574;24575;24576 17287;17288;17289 17288 480 3 102460 0 MAEMLVELVR KRCEKAEEKAKEIAKMAEMLVELVRRIEKS KEIAKMAEMLVELVRRIEKSESS_______ K M A V R R 1 1 0 0 0 0 2 0 0 0 2 0 2 0 0 0 0 0 0 2 0 0 10 0 1189.6199 Q9Y605 Q9Y605 110 119 MRFAP1 MORF4 family-associated protein 1 yes yes 2 0.0010387 109.66 By MS/MS 10 0 1 1 168340 168340 0 9903 2991 10241 24577 17290;17291 17291 1718;1719 2 178930 0 MAENLGFVGPLK QIDIFEGIKDSQAQRMAENLGFVGPLKSQA AQRMAENLGFVGPLKSQAADQITKLYNLFL R M A L K S 1 0 1 0 0 0 1 2 0 0 2 1 1 1 1 0 0 0 0 1 0 0 12 0 1274.6693 Q96I99 Q96I99 207 218 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 3.2169E-05 166.66 By MS/MS 7 0 1 1 2382600 2382600 0 9904 2200 10242 24578 17292;17293 17293 1406 2 42578 0 MAFPLLDMVDLER QGLGFRNVVTVDELRMAFPLLDMVDLERRL LRMAFPLLDMVDLERRLKTTPLPRNDFPRI R M A E R R 1 1 0 2 0 0 1 0 0 0 3 0 2 1 1 0 0 0 0 1 0 0 13 0 1548.768 Q9BXW7 Q9BXW7 162 174 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 0.00040918 122.7 By MS/MS 7.33 0.471 2 1 3 5428700 5428700 0 9905 2404 10243 24579;24580;24581 17294;17295;17296;17297;17298 17297 1483;1484 5 107850 0 MAFPLLDMVDLERR QGLGFRNVVTVDELRMAFPLLDMVDLERRL RMAFPLLDMVDLERRLKTTPLPRNDFPRIE R M A R R L 1 2 0 2 0 0 1 0 0 0 3 0 2 1 1 0 0 0 0 1 0 0 14 1 1704.8691 Q9BXW7 Q9BXW7 162 175 CECR5 Cat eye syndrome critical region protein 5 yes yes 3 0.04677 43.991 By MS/MS 7 0 1 1 819880 819880 0 9906 2404 10244 24582 17299 17299 1483;1484 1 14651 0 MAGFPPLVAEDIMLK AGHTLLQIPMGGKERMAGFPPLVAEDIMLK MAGFPPLVAEDIMLKEGLGASEAVADIKFS R M A L K E 2 0 0 1 0 0 1 1 0 1 2 1 2 1 2 0 0 0 0 1 0 0 15 0 1630.8463 Q8NC60 Q8NC60 597 611 NOA1 Nitric oxide-associated protein 1 yes yes 2 0.013008 64.64 By MS/MS 5 0 1 1 217170 217170 0 9907 1951 10245 24583 17300;17301 17300 1301;1302 2 8926.6 0 MAGIAQGVYSR ILPNWNFFLALSYFKMAGIAQGVYSRYLLG SYFKMAGIAQGVYSRYLLGNNSSEDSFLFA K M A S R Y 2 1 0 0 0 1 0 2 0 1 0 0 1 0 0 1 0 0 1 1 0 0 11 0 1151.5757 Q709F0 Q709F0 316 326 ACAD11 Acyl-CoA dehydrogenase family member 11 yes yes 2 0.00058713 135.55 By MS/MS 5 0 1 1 1362500 1362500 0 9908 1750 10246 24584 17302 17302 1236 1 56003 0 MAGLQALEDIIK RMAFMAATDHSNQLRMAGLQALEDIIKKFA QLRMAGLQALEDIIKKFASVPEPEFPGHVI R M A I K K 2 0 0 1 0 1 1 1 0 2 2 1 1 0 0 0 0 0 0 0 0 0 12 0 1300.7061 Q9P2D3 Q9P2D3 1312 1323 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.027061 77.662 By MS/MS 2.5 0.5 1 1 2 47896 47896 0 9909 2736 10247 24585;24586 17303 17303 1592 1 1835.3 0 MAGNEYVGFSNATFQSER NNAEKFDYVMQFLNKMAGNEYVGFSNATFQ NEYVGFSNATFQSERESGDRNFAIGYYLKE K M A E R E 2 1 2 0 0 1 2 2 0 0 0 0 1 2 0 2 1 0 1 1 0 0 18 0 2006.8792 O94925 O94925 365 382 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 1.0097E-18 203.04 By MS/MS 6 0 1 1 7064600 7064600 0 9910 359 10248 24587 17304 17304 1 55090 0 MAILMDHNCPIK PLCFFLRSPPAKEEKMAILMDHNCPIKTKM EEKMAILMDHNCPIKTKMYTQNNIQSYPIG K M A I K T 1 0 1 1 1 0 0 0 1 2 1 1 2 0 1 0 0 0 0 0 0 0 12 0 1441.688 Q05940 Q05940 480 491 SLC18A2 Synaptic vesicular amine transporter yes yes 2 0.0059491 109.71 By MS/MS 5 0 1 1 0 0 0 9911 1272 10249 24588 17305 17305 1031 1 0 0 MAILQIMK RQVSDVQKRVQVDVKMAILQIMKELNKRGR RVQVDVKMAILQIMKELNKRGRVLVNDAQK K M A M K E 1 0 0 0 0 1 0 0 0 2 1 1 2 0 0 0 0 0 0 0 0 0 8 0 946.53438 Q13263 Q13263 297 304 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0020208 154.09 By MS/MS 4.4 0.49 3 2 5 2886100 2886100 0 9912 1351 10250;10251;10252 24589;24590;24591;24592;24593 17306;17307;17308 17306 1059;1060 3 85137 0 MAIQTQQSK NAQVIHQLGPGLRSKMAIQTQQSKFVNWQV PGLRSKMAIQTQQSKFVNWQVDGEYRGSDF K M A S K F 1 0 0 0 0 3 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 0 9 0 1033.5226 O96008 O96008 176 184 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes yes 2 0.0053198 109.66 By MS/MS 7.5 0.5 1 1 2 652290 652290 0 9913 420 10253 24594;24595 17309 17309 223 1 15244 0 MAKPEEVLVVENDQGEVVR YLPMLFKVRLLMVSRMAKPEEVLVVENDQG EEVLVVENDQGEVVREFMKDTDSINLYKNM R M A V R E 1 1 1 1 0 1 4 1 0 0 1 1 1 0 1 0 0 0 0 5 0 0 19 1 2140.0834 O14980 O14980 424 442 XPO1 Exportin-1 yes yes 3 0.00058252 108.47 By MS/MS 4.5 0.5 1 1 2 3182400 3182400 0 9914 142 10254 24596;24597 17310 17310 89 1 94245 0 MALELLTQEFGIPIER GSWSFGDYFKELACKMALELLTQEFGIPIE ALELLTQEFGIPIERLYVTYFGGDEAAGLE K M A E R L 1 1 0 0 0 1 3 1 0 2 3 0 1 1 1 0 1 0 0 0 0 0 16 0 1858.9863 P49588 P49588 117 132 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.035026 64.121 By MS/MS 4 0 1 1 34377 34377 0 9915 921 10255 24598 17311 17311 686 1 938.46 0 MALIGLGVSHPVLK EELHYFVQNHFTSARMALIGLGVSHPVLKQ RMALIGLGVSHPVLKQVAEQFLNMRGGLGL R M A L K Q 1 0 0 0 0 0 0 2 1 1 3 1 1 0 1 1 0 0 0 2 0 0 14 0 1433.8428 P22695 P22695 218 231 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2;3 5.6194E-08 179.42 By MS/MS 7 0 2 2 3013800 3013800 0 9916 662 10256 24599;24600 17312;17313 17312 444 2 53857 0 MALLATVLGR RAAYFRQAENGMYIRMALLATVLGRF____ GMYIRMALLATVLGRF______________ R M A G R F 2 1 0 0 0 0 0 1 0 0 3 0 1 0 0 0 1 0 0 1 0 0 10 0 1043.6161 P27708 P27708 2215 2224 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 8.9817E-07 178.94 By MS/MS 1 0 1 1 420850 420850 0 9917 709 10257 24601 17314 17314 481 1 20562 0 MALNHPYFNDLDNQIK SKMLIYDPAKRISGKMALNHPYFNDLDNQI ALNHPYFNDLDNQIKKM_____________ K M A I K K 1 0 3 2 0 1 0 0 1 1 2 1 1 1 1 0 0 0 1 0 0 0 16 0 1931.92 P06493 P06493 280 295 CDK1 Cyclin-dependent kinase 1 yes yes 2;3 1.3301E-10 188.96 By MS/MS 8 0 2 2 6862000 6862000 0 9918 477 10258 24602;24603 17315;17316 17316 263 2 452690 0 MALVLEALPQIAAK KLKAEAYQKYGDAAKMALVLEALPQIAAKI KMALVLEALPQIAAKIAAPLTKVDEIVVLS K M A A K I 4 0 0 0 0 1 1 0 0 1 3 1 1 0 1 0 0 0 0 1 0 0 14 0 1466.8531 Q14254 Q14254 357 370 FLOT2 Flotillin-2 yes yes 2 0.01177 83.397 By MS/MS 7 0 1 1 170190 170190 0 9919 1425 10259 24604 17317 17317 1124 1 3041.3 0 MANSVTDLR VFEEEDFQSMTYGFKMANSVTDLRVTGMLK MTYGFKMANSVTDLRVTGMLKDVEDDMQRR K M A L R V 1 1 1 1 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 9 0 1005.4913 Q5VZE5 Q5VZE5 184 192 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 2 0.014846 95.775 By MS/MS 5 0 1 1 272750 272750 0 9920 1660 10260 24605 17318 17318 1208 1 11211 0 MAPDSDPFPEGPLLK ______________________________ MAPDSDPFPEGPLLKLLPLDARDRGTQRCR - M A L K L 1 0 0 2 0 0 1 1 0 0 2 1 1 1 4 1 0 0 0 0 0 0 15 0 1612.7807 Q9BVQ7 Q9BVQ7 1 15 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 0.00073485 113.38 By MS/MS 5 0 1 1 94627 94627 0 9921 2382 10261 24606 17319 17319 1477 1 3889.6 0 MAQELYMEQK ERRRTMMEDFRKYRKMAQELYMEQKNERLE RKYRKMAQELYMEQKNERLELRGGVDTDEL K M A Q K N 1 0 0 0 0 2 2 0 0 0 1 1 2 0 0 0 0 0 1 0 0 0 10 0 1269.5733 P55884 P55884 763 772 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0007475 134.57 By MS/MS 4 0 1 1 784060 784060 0 9922 1040 10262 24607 17320 17320 1 21404 0 MAQFDAK PQFRAVLGEVKLCEKMAQFDAKKFAETQPK GEVKLCEKMAQFDAKKFAETQPKKDTPRKE K M A A K K 2 0 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 7 0 809.37417 P26641 P26641 213 219 EEF1G Elongation factor 1-gamma yes yes 2 0.018801 129.68 By MS/MS 6.17 1.34 1 1 1 2 1 6 27128000 27128000 0 9923 700 10263;10264 24608;24609;24610;24611;24612;24613 17321;17322 17321 470 2 682580 0 MAQFDAKK PQFRAVLGEVKLCEKMAQFDAKKFAETQPK EVKLCEKMAQFDAKKFAETQPKKDTPRKEK K M A K K F 2 0 0 1 0 1 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 8 1 937.46914 P26641 P26641 213 220 EEF1G Elongation factor 1-gamma yes yes 2 0.0050008 123.98 By MS/MS 7 0 1 1 0 0 0 9924 700 10265 24614 17323 17323 470 1 0 0 MAQYAQR HKLADICKNLNFRHKMAQYAQRASVAFHTQ KNLNFRHKMAQYAQRASVAFHTQLFFKSKG K M A Q R A 2 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 7 0 866.40687 Q9Y2L1 Q9Y2L1 823 829 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.012109 132.72 By MS/MS 4 0 1 1 337920 337920 0 9925 2892 10266 24615 17324 17324 1664 1 9224.8 0 MASVPSIGCLLARNQYYRK ______________________________ PSIGCLLARNQYYRKSSVSSVSSLTSSDSV - M A R K S 2 2 1 0 1 1 0 1 0 1 2 1 1 0 1 2 0 0 2 1 0 0 19 2 2226.1402 Q8WWR9 Q8WWR9 1 19 C8orf22 Pancreatic progenitor cell differentiation and proliferation factor-like protein yes yes 3 0.029234 44.734 By MS/MS 6 0 1 1 1579100 1579100 0 9926 2042 10267 24616 17325 17325 1328 1 12314 0 MATEVAADALGEEWK EVDDERKLRTFYEKRMATEVAADALGEEWK MATEVAADALGEEWKGYVVRISGGNDKQGF R M A W K G 4 0 0 1 0 0 3 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 15 0 1619.7501 P62753 P62753 32 46 RPS6 40S ribosomal protein S6 yes yes 2 1.8573E-20 219.43 By MS/MS 8 0 2 2 6942500 6942500 0 9927 1143 10268;10269 24617;24618 17326;17327 17327 892 2 457990 0 MATLSVGGK CHVLKYTSKENCNGKMATLSVGGKTVSRFR ENCNGKMATLSVGGKTVSRFRKATSILEFY K M A G K T 1 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 9 0 862.45824 P09001 P09001 142 150 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 0.0071772 103.74 By MS/MS 8 0 1 1 1044000 1044000 0 9928 510 10270 24619 17328 17328 308 1 68873 0 MATNAAAQNAIK EEQQQRLREAAEGLRMATNAAAQNAIKKKL GLRMATNAAAQNAIKKKLVQRLEHAAKQAA R M A I K K 5 0 2 0 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 12 0 1202.6078 Q9Y490 Q9Y490 899 910 TLN1 Talin-1 yes yes 2 6.9713E-17 256.24 By MS/MS 2 0.707 1 2 1 4 1772900 1772900 0 9929 2947 10271;10272 24620;24621;24622;24623 17329;17330 17329 1691 2 85560 0 MATNTVYVFAK FIINGSEKVLIAQEKMATNTVYVFAKKDSK AQEKMATNTVYVFAKKDSKYAYTGECRSCL K M A A K K 2 0 1 0 0 0 0 0 0 0 0 1 1 1 0 0 2 0 1 2 0 0 11 0 1243.6271 P30876 P30876 200 210 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.00092676 128.91 By MS/MS 3 0 1 1 1425600 1425600 0 9930 748 10273 24624 17331 17331 504 1 37215 0 MATQASTLYSNNITK HKGITHIGYTDLPSRMATQASTLYSNNITK MATQASTLYSNNITKLLKAISPDKDNFYFD R M A T K L 2 0 2 0 0 1 0 0 0 1 1 1 1 0 0 2 3 0 1 0 0 0 15 0 1641.8032 Q13423 Q13423 380 394 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 4.1384E-63 295.29 By MS/MS 3.67 3.09 1 1 1 3 2130300 2130300 0 9931 1367 10274;10275 24625;24626;24627 17332;17333;17334 17332 1066 3 118660 0 MAVLALLAK KCDSWWAKDSPLETKMAVLALLAKILQIDS SPLETKMAVLALLAKILQIDSSVSFNTSHG K M A A K I 3 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 9 0 928.57796 P78527 P78527 1643 1651 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00098387 135.87 By MS/MS By matching 2.6 1.02 1 1 2 1 4 1 4213000 4028100 184910 9932 1197 10276 24628;24629;24630;24631;24632 17335;17336;17337;17338 17335 961 4 183130 265010 MAVMAPR ______________________________ ______________________________ - M A P R T 2 1 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 7 0 774.38805 P04439 P04439 1 7 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain yes yes 2 0.051481 42.773 By MS/MS 1 0 1 1 6477.2 0 6477.2 9933 453 10277 24633 17339 17339 0 0 6477.2 MAVQDAVDALMQK FLKVSSVFKDEATVRMAVQDAVDALMQKAF VRMAVQDAVDALMQKAFNSSSFNSNTFLTR R M A Q K A 3 0 0 2 0 2 0 0 0 0 1 1 2 0 0 0 0 0 0 2 0 0 13 0 1418.6898 P46060 P46060 488 500 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 7.5064E-12 205.56 By MS/MS 5 0.577 1 4 1 6 4617900 4617900 0 9934 876 10278;10279;10280 24634;24635;24636;24637;24638;24639 17340;17341;17342;17343 17343 626;627 4 175020 0 MAVTFIGNSTAIQELFK NVKTAVCDIPPRGLKMAVTFIGNSTAIQEL VTFIGNSTAIQELFKRISEQFTAMFRRKAF K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 P07437 P07437 363 379 TUBB Tubulin beta chain yes yes 2;3 1.8475E-115 355.81 By MS/MS 6 0.577 1 4 1 6 50198000 50198000 0 9935 490 10281;10282 24640;24641;24642;24643;24644;24645 17344;17345;17346;17347;17348 17348 280 5 392850 0 MAVTFIGNSTAIQELFKR NVKTAVCDIPPRGLKMAVTFIGNSTAIQEL TFIGNSTAIQELFKRISEQFTAMFRRKAFL K M A K R I 2 1 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 18 1 2025.0717 P07437 P07437 363 380 TUBB Tubulin beta chain yes yes 2;3 6.9233E-55 278.16 By MS/MS 6 0 4 4 15071000 15071000 0 9936 490 10283;10284 24646;24647;24648;24649 17349;17350;17351;17352 17350 280 4 117520 0 MAYEYADER HYVDWRMWRDVKRRKMAYEYADERLRINSL DVKRRKMAYEYADERLRINSLRKNTILPKI K M A E R L 2 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 9 0 1146.4652 O60783 O60783 43 51 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 2 0.00084427 138.06 By MS/MS 10 0 1 1 924190 924190 0 9937 265 10285 24650 17353 17353 149 1 982320 0 MAYEYADERLR HYVDWRMWRDVKRRKMAYEYADERLRINSL KRRKMAYEYADERLRINSLRKNTILPKILQ K M A L R I 2 2 0 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 2 0 0 0 11 1 1415.6503 O60783 O60783 43 53 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 3 0.0096112 87.806 By MS/MS 10 0 1 1 232850 232850 0 9938 265 10286 24651 17354 17354 149 1 247490 0 MCDLVSDFDGFSER IGPVYSSKAARSGLRMCDLVSDFDGFSERF RMCDLVSDFDGFSERFKVLANQYKSIYPTL R M C E R F 0 1 0 3 1 0 1 1 0 0 1 0 1 2 0 2 0 0 0 1 0 0 14 0 1676.6811 P30520 P30520 181 194 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 6.4781E-09 193.73 By MS/MS 7 0 1 1 1362900 1362900 0 9939 742 10287 24652 17355 17355 502 1 24356 0 MCEVVLGEFLK GLFQILGDNGKEIRKMCEVVLGEFLKEIKK EIRKMCEVVLGEFLKEIKKNPSSVKFAEMA K M C L K E 0 0 0 0 1 0 2 1 0 0 2 1 1 1 0 0 0 0 0 2 0 0 11 0 1323.6567 Q08AM6 Q08AM6 235 245 VAC14 Protein VAC14 homolog yes yes 2 0.04911 70.942 By MS/MS 5 0 1 1 197040 197040 0 9940 1294 10288 24653 17356 17356 1 8098.9 0 MCLEANIPLEK TAQTEKVSVIQDFVKMCLEANIPLEKADHP DFVKMCLEANIPLEKADHPAVRAFLSRHVK K M C E K A 1 0 1 0 1 0 2 0 0 1 2 1 1 0 1 0 0 0 0 0 0 0 11 0 1316.6468 Q9UFW8 Q9UFW8 110 120 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 2 0.0032687 108.67 By MS/MS 9.5 0.5 1 1 2 327360 327360 0 9941 2769 10289 24654;24655 17357 17357 1617 1 224100 0 MCTLIDKFDEHDGPVR LTSLHNGVIQLWDYRMCTLIDKFDEHDGPV CTLIDKFDEHDGPVRGIDFHKQQPLFVSGG R M C V R G 0 1 0 3 1 0 1 1 1 1 1 1 1 1 1 0 1 0 0 1 0 0 16 1 1931.887 P53621 P53621 40 55 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.0078412 81.327 By MS/MS 3 0 1 1 814970 814970 0 9942 1005 10290 24656 17358 17358 782 1 21275 0 MCYLTIK AMTKLFQSNDPTLRRMCYLTIKEMSCIAED SNDPTLRRMCYLTIKEMSCIAEDVIIVTSS R M C I K E 0 0 0 0 1 0 0 0 0 1 1 1 1 0 0 0 1 0 1 0 0 0 7 0 927.4558 Q9Y678;Q9UBF2 Q9Y678 87 93 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 0.043933 97.071 By MS/MS 4.5 0.5 1 1 2 1870300 1870300 0 9943 2996;2748 10291 24657;24658 17359 17359 1 64654 0 MDAAEVEFLAEK ______________________________ ______________________________ - M D E K E 3 0 0 1 0 0 3 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 12 0 1351.633 Q9Y248 Q9Y248 1 12 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 0.0019262 105.46 By MS/MS 9 0 1 1 125170 125170 0 9944 2867 10292 24659 17360 17360 1 71836 0 MDAATLTYDTLR ______________________________ ______________________________ - M D L R F 2 1 0 2 0 0 0 0 0 0 2 0 1 0 0 0 3 0 1 0 0 0 12 0 1369.6548 Q9Y4P1 Q9Y4P1 1 12 ATG4B Cysteine protease ATG4B yes yes 2 0.0014223 112.13 By MS/MS 7 0 1 1 59567 59567 0 9945 2956 10293 24660 17361 17361 1 1064.5 0 MDALKSAGR ______________________________ ______________________________ - M D G R A 2 1 0 1 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 9 1 947.48585 Q5SW96 Q5SW96 1 9 LDLRAP1 Low density lipoprotein receptor adapter protein 1 yes yes 2 0.040311 71.692 By MS/MS 5 0 1 1 1471900 1471900 0 9946 1622 10294 24661 17362 17362 1199 1 60503 0 MDASLGNLFAR FLLTFYVISQVFEIKMDASLGNLFARSALD FEIKMDASLGNLFARSALDTAARSTKPPRY K M D A R S 2 1 1 1 0 0 0 1 0 0 2 0 1 1 0 1 0 0 0 0 0 0 11 0 1193.5863 Q92520 Q92520 31 41 FAM3C Protein FAM3C yes yes 2 1.1489E-07 192.64 By MS/MS 9.5 0.5 1 1 2 388420 388420 0 9947 2054 10295 24662;24663 17363 17363 1331 1 242200 0 MDATSYSSIASEFGVR GLEMKSIGSPVKVGKMDATSYSSIASEFGV DATSYSSIASEFGVRGYPTIKLLKGDLAYN K M D V R G 2 1 0 1 0 0 1 1 0 1 0 0 1 1 0 4 1 0 1 1 0 0 16 0 1719.7774 Q96JJ7 Q96JJ7 82 97 TMX3 Protein disulfide-isomerase TMX3 yes yes 2 2.1838E-10 188.15 By MS/MS 6 0 1 1 924320 924320 0 9948 2211 10296 24664 17364 17364 1 7207.9 0 MDCQECPEGYR AGALSVTIDGPSKVKMDCQECPEGYRVTYT SKVKMDCQECPEGYRVTYTPMAPGSYLISI K M D Y R V 0 1 0 1 2 1 2 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 11 0 1443.5217 P21333 P21333 2474 2484 FLNA Filamin-A yes yes 2 0.0034234 121.9 By MS/MS 2 0 1 1 0 0 0 9949 648 10297 24665 17365 17365 438 1 0 0 MDDKELIEYFK ______________________________ ______________________________ - M D F K S 0 0 0 2 0 0 2 0 0 1 1 2 1 1 0 0 0 0 1 0 0 0 11 1 1429.6799 Q14232 Q14232 1 11 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 2 0.023568 74.841 By MS/MS 8 0 1 1 177110 177110 0 9950 1422 10298 24666 17366 17366 1123 1 11684 0 MDDREDLVYQAK ______________________________ ______________________________ - M D A K L 1 1 0 3 0 1 1 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 12 1 1481.682 P62258 P62258 1 12 YWHAE 14-3-3 protein epsilon yes yes 2 0.023459 92.866 By MS/MS By matching 8.67 0.745 3 2 1 5 1 33124000 33030000 94021 9951 1121 10299;10300 24667;24668;24669;24670;24671;24672 17367;17368 17367 877 2 2460500 802110 MDELQLFR AINEDNSVVSLSQPKMDELQLFRGDTVLLK VSLSQPKMDELQLFRGDTVLLKGKKRREAV K M D F R G 0 1 0 1 0 1 1 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 8 0 1050.5168 P55072 P55072 46 53 VCP Transitional endoplasmic reticulum ATPase yes yes 2 3.3673E-13 244.87 By MS/MS By matching 5.86 2.36 3 2 1 1 6 1 6947700 6906000 41692 9952 1026 10301;10302 24673;24674;24675;24676;24677;24678;24679 17369;17370;17371;17372 17371 800 4 456670 87118 MDELQLFRGDTVLLK AINEDNSVVSLSQPKMDELQLFRGDTVLLK MDELQLFRGDTVLLKGKKRREAVCIVLSDD K M D L K G 0 1 0 2 0 1 1 1 0 0 4 1 1 1 0 0 1 0 0 1 0 0 15 1 1776.9444 P55072 P55072 46 60 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0069154 83.53 By MS/MS 5.5 1.12 1 1 1 1 4 3536400 3536400 0 9953 1026 10303 24680;24681;24682;24683 17373 17373 800 1 85015 0 MDEQALLGLNPNADSDFR ______________________________ QALLGLNPNADSDFRQRALAYFEQLKISPD - M D F R Q 2 1 2 3 0 1 1 1 0 0 3 0 1 1 1 1 0 0 0 0 0 0 18 0 2004.9211 O43592 O43592 1 18 XPOT Exportin-T yes yes 2 0.0017767 98.676 By MS/MS 4 0 2 2 539340 539340 0 9954 208 10304;10305 24684;24685 17374;17375 17374 122 2 14723 0 MDEQALLGLNPNADSDFRQR ______________________________ LLGLNPNADSDFRQRALAYFEQLKISPDAW - M D Q R A 2 2 2 3 0 2 1 1 0 0 3 0 1 1 1 1 0 0 0 0 0 0 20 1 2289.0808 O43592 O43592 1 20 XPOT Exportin-T yes yes 3 0.011906 64.346 By MS/MS 4 0 1 1 569990 569990 0 9955 208 10306 24686 17376 17376 122 1 15560 0 MDFLLGNPFSSPVGQR ______________________________ DFLLGNPFSSPVGQRIEKATDGSLQSEDWA - M D Q R I 0 1 1 1 0 1 0 2 0 0 2 0 1 2 2 2 0 0 0 1 0 0 16 0 1763.8665 O60784 O60784 1 16 TOM1 Target of Myb protein 1 yes yes 2 7.0623E-08 159.66 By MS/MS 6 0 2 2 650100 650100 0 9956 266 10307;10308 24687;24688 17377;17378;17379 17377 150 3 5069.5 0 MDKNELVQK ______________________________ ______________________________ - M D Q K A 0 0 1 1 0 1 1 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 9 1 1103.5645 P63104 P63104 1 9 YWHAZ 14-3-3 protein zeta/delta yes yes 2 1.4345E-05 177.3 By MS/MS By matching 8 0 3 2 1 8992100 8953900 38202 9957 1169 10309;10310 24689;24690;24691 17380;17381 17381 910 2 590690 325910 MDLAAAAEPGAGSQHLEVRDEVAEK ______________________________ AGSQHLEVRDEVAEKCQKLFLDFLEEFQSS - M D E K C 6 1 0 2 0 1 4 2 1 0 2 1 1 0 1 1 0 0 0 2 0 0 25 1 2593.2442 Q14566 Q14566 1 25 MCM6 DNA replication licensing factor MCM6 yes yes 3 0.013708 53.779 By MS/MS 4 0 1 1 2857600 2857600 0 9958 1436 10311 24692 17382 17382 1127 1 78010 0 MDLADLTEQQK QETLGLKPHLLVLNKMDLADLTEQQKIMQH VLNKMDLADLTEQQKIMQHLEGEGLKNVIF K M D Q K I 1 0 0 2 0 2 1 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 11 0 1290.6126 Q9BT17 Q9BT17 85 95 MTG1 Mitochondrial ribosome-associated GTPase 1 yes yes 2 8.4549E-11 200.71 By MS/MS 8 0 2 2 2160200 2160200 0 9959 2343 10312;10313 24693;24694 17383;17384 17383 1467 2 142510 0 MDLDLLDLNPR ______________________________ ______________________________ - M D P R I 0 1 1 3 0 0 0 0 0 0 4 0 1 0 1 0 0 0 0 0 0 0 11 0 1313.6649 O43542 O43542 1 11 XRCC3 DNA repair protein XRCC3 yes yes 2 0.03667 60.167 By MS/MS 7 0 1 1 67001 67001 0 9960 206 10314 24695 17385 17385 120 1 1197.3 0 MDLNPSFLGIALR GPSQSPAPPLPEEDRMDLNPSFLGIALRSL DRMDLNPSFLGIALRSLLAIDLWLSKKLGV R M D L R S 1 1 1 1 0 0 0 1 0 1 3 0 1 1 1 1 0 0 0 0 0 0 13 0 1445.7701 Q8IY26 Q8IY26 92 104 PPAPDC2 Presqualene diphosphate phosphatase yes yes 2 0.044133 67.08 By MS/MS 8 0 1 1 64362 64362 0 9961 1877 10315 24696 17386 17386 1 4246 0 MDLVTYFGK KELRQFVPGDEPREKMDLVTYFGKRPPGVL DEPREKMDLVTYFGKRPPGVLHCTTKFCDY K M D G K R 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 0 1 0 1 1 0 0 9 0 1072.5263 P09543 P09543 236 244 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.0014005 136.27 By MS/MS 7 0.707 1 2 1 4 3447700 3447700 0 9962 516 10316;10317 24697;24698;24699;24700 17387;17388 17388 311 2 63282 0 MDNYADLSDTELTTLLR ______________________________ NYADLSDTELTTLLRRYNIPHGPVVGSTRR - M D L R R 1 1 1 3 0 0 1 0 0 0 4 0 1 0 0 1 3 0 1 0 0 0 17 0 1969.9303 P50402 P50402 1 17 EMD Emerin yes yes 2 1.066E-43 252.46 By MS/MS 7.5 0.5 1 1 2 660380 660380 0 9963 945 10318 24701;24702 17389 17389 700 1 40695 0 MDPMNIWDDIITNR KRLLNTWTNRYPDAKMDPMNIWDDIITNRC KMDPMNIWDDIITNRCFFLSKIEEKLTPLP K M D N R C 0 1 2 3 0 0 0 0 0 3 0 0 2 0 1 0 1 1 0 0 0 0 14 0 1732.7913 P78527 P78527 3173 3186 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0034084 88.101 By MS/MS 2 0.816 1 1 1 3 183780 183780 0 9964 1197 10319 24703;24704;24705 17390;17391;17392;17393 17392 962;963 4 6929.4 0 MDPNTIIEALR ______________________________ ______________________________ - M D L R G 1 1 1 1 0 0 1 0 0 2 1 0 1 0 1 0 1 0 0 0 0 0 11 0 1271.6544 O95373 O95373 1 11 IPO7 Importin-7 yes yes 2 0.0032771 97.214 By MS/MS 3.5 0.5 1 1 2 1680500 1680500 0 9965 388 10320 24706;24707 17394 17394 207 1 45807 0 MDQDSLSSSLK LVRFRIGGKRKVMPKMDQDSLSSSLKTCYK VMPKMDQDSLSSSLKTCYKYLNQTSRSFAA K M D L K T 0 0 0 2 0 1 0 0 0 0 2 1 1 0 0 4 0 0 0 0 0 0 11 0 1209.5547 P37268 P37268 31 41 FDFT1 Squalene synthase yes yes 2 0.0038447 105.13 By MS/MS 6.5 0.5 1 1 2 6898200 6898200 0 9966 814 10321 24708;24709 17395 17395 560 1 119380 0 MDQVMQFVEPSR ______________________________ ______________________________ - M D S R Q 0 1 0 1 0 2 1 0 0 0 0 0 2 1 1 1 0 0 0 2 0 0 12 0 1465.6694 P60059 P60059 1 12 SEC61G Protein transport protein Sec61 subunit gamma yes yes 2 0.036758 47.288 By MS/MS 10 0 1 1 209370 209370 0 9967 1063 10322 24710 17396 17396 825;826 1 222540 0 MDQYFNQMEK TTIGKDLDFEKAKPRMDQYFNQMEKIIKEK KAKPRMDQYFNQMEKIIKEKKTSSRIRFML R M D E K I 0 0 1 1 0 2 1 0 0 0 0 1 2 1 0 0 0 0 1 0 0 0 10 0 1332.5479 Q04637;O43432 Q04637 955 964 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2 5.1156E-22 238.73 By MS/MS 2.73 1.05 1 4 4 1 1 11 14095000 14095000 0 9968 1264;200 10323;10324;10325 24711;24712;24713;24714;24715;24716;24717;24718;24719;24720;24721 17397;17398;17399;17400;17401 17397 115;116 5 665950 0 MDSTEPPYSQK AYTLGVKQLIVGVNKMDSTEPPYSQKRYEE GVNKMDSTEPPYSQKRYEEIVKEVSTYIKK K M D Q K R 0 0 0 1 0 1 1 0 0 0 0 1 1 0 2 2 1 0 1 0 0 0 11 0 1281.5547 Q5VTE0;P68104 Q5VTE0 155 165 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2 0.022832 96.665 By MS/MS 7 0 1 1 944090 944090 0 9969 1184 10326 24722 17402 17402 922 0 16871 0 MDTIDQDDELIR RQKRWWNAYILFYERMDTIDQDDELIRYIS YERMDTIDQDDELIRYISELAITTRPHQII R M D I R Y 0 1 0 4 0 1 1 0 0 2 1 0 1 0 0 0 1 0 0 0 0 0 12 0 1462.661 Q93008 Q93008 1956 1967 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 3.129E-44 283.82 By MS/MS 2.78 1.31 2 2 2 2 1 9 4759000 4759000 0 9970 2096 10327;10328 24723;24724;24725;24726;24727;24728;24729;24730;24731 17403;17404 17403 1371 2 204030 0 MDTSRVQPIKLAR ______________________________ ______________________________ - M D A R V 1 2 0 1 0 1 0 0 0 1 1 1 1 0 1 1 1 0 0 1 0 0 13 2 1513.8399 P62857 P62857 1 13 RPS28 40S ribosomal protein S28 yes yes 3 0.010053 70.563 By MS/MS 10 0 1 1 2338300 2338300 0 9971 1152 10329 24732 17405 17405 901 1 2485300 0 MDVFLMIR ______________________________ ______________________________ - M D I R R 0 1 0 1 0 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 8 0 1023.5245 Q15370 Q15370 1 8 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.01885 75.109 By MS/MS 10 0 1 1 498850 498850 0 9972 1492 10330 24733 17406 17406 1156;1157 1 530230 0 MEAAVGVPDGGDQGGAGPR ______________________________ VGVPDGGDQGGAGPREDATPMDAYLRKLGL - M E P R E 3 1 0 2 0 1 1 6 0 0 0 0 1 0 2 0 0 0 0 2 0 0 19 0 1739.7897 Q01804 Q01804 1 19 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0089898 63.091 By MS/MS 2.5 0.5 1 1 2 111610 0 111610 9973 1245 10331 24734;24735 17407;17408 17407 1010 2 0 141170 MEADLSGFNIDAPR ______________________________ ______________________________ - M E P R W 2 1 1 2 0 0 1 1 0 1 1 0 1 1 1 1 0 0 0 0 0 0 14 0 1534.7086 Q96NB2 Q96NB2 1 14 SFXN2 Sideroflexin-2 yes yes 2 1.1421E-46 272.1 By MS/MS 8 0 2 2 4484700 4484700 0 9974 2231 10332;10333 24736;24737 17409;17410 17409 1417 2 295850 0 MEAIWLYQFR ______________________________ ______________________________ - M E F R L 1 1 0 0 0 1 1 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 10 0 1355.6696 Q96DA2 Q96DA2 1 10 RAB39B Ras-related protein Rab-39B yes yes 2 0.0034435 98.033 By MS/MS 9 0 1 1 52528 52528 0 9975 2148 10334 24738 17411;17412 17412 1394 2 30147 0 MEALGDLEGPR ______________________________ ______________________________ - M E P R A 1 1 0 1 0 0 2 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 11 0 1186.5652 Q6NT16 Q6NT16 1 11 SLC18B1 MFS-type transporter SLC18B1 yes yes 2 0.0099275 83.499 By MS/MS 1.5 0.5 1 1 2 93312 93312 0 9976 1689 10335 24739;24740 17413 17413 1 4584.2 0 MEALILEPSLYTVK ______________________________ ______________________________ - M E V K A 1 0 0 0 0 0 2 0 0 1 3 1 1 0 1 1 1 0 1 1 0 0 14 0 1605.8688 P61923 P61923 1 14 COPZ1 Coatomer subunit zeta-1 yes yes 2 0.00013034 133.89 By MS/MS 9.5 0.5 1 1 2 7594900 7594900 0 9977 1107 10336 24741;24742 17414;17415;17416;17417;17418 17414 865 5 4783500 0 MEASVILPILK ______________________________ ______________________________ - M E L K K 1 0 0 0 0 0 1 0 0 2 2 1 1 0 1 1 0 0 0 1 0 0 11 0 1212.7152 Q86VW0 Q86VW0 1 11 SESTD1 SEC14 domain and spectrin repeat-containing protein 1 yes yes 2 0.023678 68.371 By MS/MS 5 0 1 1 65925 65925 0 9978 1832 10337 24743 17419 17419 1275 1 2709.8 0 MEATGVLPFVR ______________________________ ______________________________ - M E V R G 1 1 0 0 0 0 1 1 0 0 1 0 1 1 1 0 1 0 0 2 0 0 11 0 1218.6431 Q13045 Q13045 1 11 FLII Protein flightless-1 homolog yes yes 2 0.00024588 135.71 By MS/MS 3 0 1 1 486370 486370 0 9979 1328 10338 24744 17420 17420 1048 1 12697 0 MEDDAPVIYGLEFQAR ______________________________ EDDAPVIYGLEFQARALTPQTAETDAIRFL - M E A R A 2 1 0 2 0 1 2 1 0 1 1 0 1 1 1 0 0 0 1 1 0 0 16 0 1852.8665 Q53HC9 Q53HC9 1 16 TSSC1 Protein TSSC1 yes yes 2 0.00018387 122.46 By MS/MS 6 0 1 1 269040 269040 0 9980 1589 10339 24745 17421 17421 1 2098 0 MEDDKVAEAAIQIFR FHSAETYESLLQCLRMEDDKVAEAAIQIFR MEDDKVAEAAIQIFRNTGHKIETDLPQIRS R M E F R N 3 1 0 2 0 1 2 0 0 2 0 1 1 1 0 0 0 0 0 1 0 0 15 1 1734.8611 Q29RF7 Q29RF7 689 703 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.014968 74.296 By MS/MS 3.5 0.5 1 1 2 314630 314630 0 9981 1556 10340 24746;24747 17422 17422 1175 1 8316.4 0 MEDYTKIEK ______________________________ ______________________________ - M E E K I 0 0 0 1 0 0 2 0 0 1 0 2 1 0 0 0 1 0 1 0 0 0 9 1 1155.5482 P06493 P06493 1 9 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.0022068 114.97 By MS/MS 8 0 1 1 4886700 4886700 0 9982 477 10341 24748 17423 17423 264 1 322380 0 MEEADALIESLCR LRGLAVGIALVMYGRMEEADALIESLCRDK GRMEEADALIESLCRDKDPILRRSGMYTVA R M E C R D 2 1 0 1 1 0 3 0 0 1 2 0 1 0 0 1 0 0 0 0 0 0 13 0 1535.696 Q99460 Q99460 560 572 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 6.5333E-46 277.1 By MS/MS 4 0.816 2 2 2 6 4332700 4332700 0 9983 2268 10342;10343 24749;24750;24751;24752;24753;24754 17424;17425 17425 1426 2 121670 0 MEEANIQPNR LQNEYKFSPTDFLAKMEEANIQPNRVTYQR DFLAKMEEANIQPNRVTYQRLIASYCNVGD K M E N R V 1 1 2 0 0 1 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 10 0 1200.5557 P42704 P42704 188 197 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.1448E-15 220.39 By MS/MS By MS/MS 3.11 1.1 1 1 4 2 1 7 2 30303000 30163000 140540 9984 854 10344;10345 24755;24756;24757;24758;24759;24760;24761;24762;24763 17426;17427;17428;17429;17430 17430 611 4 805700 201420 MEEANIQPNRVTYQR LQNEYKFSPTDFLAKMEEANIQPNRVTYQR MEEANIQPNRVTYQRLIASYCNVGDIEGAS K M E Q R L 1 2 2 0 0 2 2 0 0 1 0 0 1 0 1 0 1 0 1 1 0 0 15 1 1847.8948 P42704 P42704 188 202 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.0060568 87.831 By MS/MS By MS/MS 3.25 0.433 3 1 3 1 20190000 20028000 161370 9985 854 10346;10347 24764;24765;24766;24767 17431;17432;17433 17433 611 3 523300 231280 MEEIGILVEK ______________________________ ______________________________ - M E E K A 0 0 0 0 0 0 3 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 10 0 1159.6159 P43686 P43686 1 10 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.00011225 152.81 By MS/MS 6.75 0.829 2 1 1 4 1728000 1728000 0 9986 867 10348;10349 24768;24769;24770;24771 17434;17435;17436;17437 17434 621 4 18593 0 MEEQGLADASLLKK NLTEDNSQNQDLIAKMEEQGLADASLLKKV KMEEQGLADASLLKKVGFEVEKKGEKLILK K M E K K V 2 0 0 1 0 1 2 1 0 0 3 2 1 0 0 1 0 0 0 0 0 0 14 1 1531.7916 Q9UBB4 Q9UBB4 439 452 ATXN10 Ataxin-10 yes yes 3 0.039008 64.374 By MS/MS 5 1.41 1 1 1 1 1 5 6743300 6743300 0 9987 2744 10350 24772;24773;24774;24775;24776 17438 17438 0 182390 0 MEEVKEANIR LCISTKKEVEKMNKKMEEVKEANIRVVSED KMNKKMEEVKEANIRVVSEDFLQDVSASTK K M E I R V 1 1 1 0 0 0 3 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 10 1 1217.6074 P09874 P09874 443 452 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.0021876 109.79 By MS/MS By matching 4 0.535 1 5 1 6 1 2867900 2827200 40686 9988 521 10351;10352 24777;24778;24779;24780;24781;24782;24783 17439;17440;17441;17442 17440 315 4 78523 85016 MEEVVIAGMSGK ______________________________ ______________________________ - M E G K L 1 0 0 0 0 0 2 2 0 1 0 1 2 0 0 1 0 0 0 2 0 0 12 0 1249.6046 P49327 P49327 1 12 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00011268 143.96 By MS/MS 3.64 2.8 2 4 1 1 1 1 1 11 3694800 3694800 0 9989 915 10353;10354;10355 24784;24785;24786;24787;24788;24789;24790;24791;24792;24793;24794 17443;17444;17445;17446;17447;17448;17449;17450;17451;17452;17453 17453 660;661 11 198660 0 MEFPIGSLETNNFRR ______________________________ MEFPIGSLETNNFRRFTPESLVEIEKQIAA - M E R R F 0 2 2 0 0 0 2 1 0 1 1 0 1 2 1 1 1 0 0 0 0 0 15 1 1809.8832 Q9Y5Y9 Q9Y5Y9 1 15 SCN10A Sodium channel protein type 10 subunit alpha yes yes 2 0.016975 66.19 By MS/MS 6 0 1 1 0 0 0 9990 2989 10356 24795 17454 17454 1717 1 0 0 MEFVSEVQR MERYQHYRQTVRALRMEFVSEVQRKVHEAR TVRALRMEFVSEVQRKVHEARAGVLAERKA R M E Q R K 0 1 0 0 0 1 2 0 0 0 0 0 1 1 0 1 0 0 0 2 0 0 9 0 1123.5332 Q9BYN8 Q9BYN8 72 80 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.00018766 159.28 By MS/MS 9 0 2 2 3277700 3277700 0 9991 2417 10357;10358 24796;24797 17455;17456 17455 1490 2 1881100 0 MEGGFGSDFGGSGSGK ______________________________ EGGFGSDFGGSGSGKLDPGLIMEQVKVQIA - M E G K L 0 0 0 1 0 0 1 7 0 0 0 1 1 2 0 3 0 0 0 0 0 0 16 0 1475.5987 Q9Y5L4 Q9Y5L4 1 16 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 6.0431E-39 252.37 By MS/MS 10 0 2 2 329760 329760 0 9992 2975 10359;10360 24798;24799 17457;17458 17457 1713 2 350500 0 MEGPLSVFGDR ______________________________ ______________________________ - M E D R S 0 1 0 1 0 0 1 2 0 0 1 0 1 1 1 1 0 0 0 1 0 0 11 0 1206.5703 P17987 P17987 1 11 TCP1 T-complex protein 1 subunit alpha yes yes 2 7.1324E-06 173.24 By MS/MS By MS/MS 5.55 2.74 2 2 2 2 2 4 2 2 2 2 21 1 17722000 17692000 29960 9993 619 10361;10362 24800;24801;24802;24803;24804;24805;24806;24807;24808;24809;24810;24811;24812;24813;24814;24815;24816;24817;24818;24819;24820;24821 17459;17460;17461;17462;17463;17464;17465;17466;17467;17468;17469;17470;17471;17472;17473;17474;17475;17476;17477 17465 408 19 840750 91886 MEGSASPPEKPR ______________________________ ______________________________ - M E P R A 1 1 0 0 0 0 2 1 0 0 0 1 1 0 3 2 0 0 0 0 0 0 12 1 1284.6132 Q96NT5 Q96NT5 1 12 SLC46A1 Proton-coupled folate transporter yes yes 2 0.011968 109.83 By MS/MS 1.5 0.5 1 1 2 190790 190790 0 9994 2234 10363 24822;24823 17478 17478 1 9381.2 0 MEGVSALLAR ______________________________ ______________________________ - M E A R C 2 1 0 0 0 0 1 1 0 0 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1045.559 Q5SNT2 Q5SNT2 1 10 TMEM201 Transmembrane protein 201 yes yes 2 0.00092645 115.71 By MS/MS 4.5 0.5 1 1 2 81739 81739 0 9995 1617 10364 24824;24825 17479;17480 17480 2 3085.9 0 MEHFDASLSTYFK ______________________________ ______________________________ - M E F K A 1 0 0 1 0 0 1 0 1 0 1 1 1 2 0 2 1 0 1 0 0 0 13 0 1574.7075 Q9NYP7 Q9NYP7 1 13 ELOVL5 Elongation of very long chain fatty acids protein 5 yes yes 2 0.0040856 89.9 By MS/MS 2 0 1 1 141500 141500 0 9996 2697 10365 24826 17481 17481 1578 1 7033.4 0 MEHFLLEVAAAPLR ______________________________ ______________________________ - M E L R L 3 1 0 0 0 0 2 0 1 0 3 0 1 1 1 0 0 0 0 1 0 0 14 0 1595.8494 Q9NU22 Q9NU22 1 14 MDN1 Midasin yes yes 2 0.040517 54.143 By MS/MS 2 0 1 1 32008 32008 0 9997 2635 10366 24827 17482 17482 1562 1 1591 0 MEIGLPDEKGR LIDEALLRPGRLEVKMEIGLPDEKGRLQIL LEVKMEIGLPDEKGRLQILHIHTARMRGHQ K M E G R L 0 1 0 1 0 0 2 2 0 1 1 1 1 0 1 0 0 0 0 0 0 0 11 1 1243.6231 P46459 P46459 393 403 NSF Vesicle-fusing ATPase yes yes 3 0.021923 76.843 By MS/MS 5 0 1 1 1251000 1251000 0 9998 881 10367 24828 17483 17483 629 1 51421 0 MEKTELIQK ______________________________ ______________________________ - M E Q K A 0 0 0 0 0 1 2 0 0 1 1 2 1 0 0 0 1 0 0 0 0 0 9 1 1118.6005 P27348 P27348 1 9 YWHAQ 14-3-3 protein theta yes yes 2 0.0043271 134.77 By MS/MS 8 0 1 1 3346200 3346200 0 9999 703 10368 24829 17484 17484 1 220750 0 MELEAMSR ______________________________ ______________________________ - M E S R Y 1 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 8 0 965.43104 P61165 P61165 1 8 TMEM258 Transmembrane protein 258 yes yes 2 0.010664 99.802 By MS/MS 10 0 3 3 452590 452590 0 10000 1091 10369;10370;10371 24830;24831;24832 17485;17486;17487 17485 1 481050 0 MELGELLYNK ______________________________ ______________________________ - M E N K S 0 0 1 0 0 0 2 1 0 0 3 1 1 0 0 0 0 0 1 0 0 0 10 0 1208.6111 Q9BTE1 Q9BTE1 1 10 DCTN5 Dynactin subunit 5 yes yes 2 0.0016361 105.4 By MS/MS 9.5 0.5 1 1 2 132550 132550 0 10001 2348 10372 24833;24834 17488;17489;17490 17489 1469 3 100240 0 MELITILEK ______________________________ ______________________________ - M E E K T 0 0 0 0 0 0 2 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 9 0 1088.6151 Q14974 Q14974 1 9 KPNB1 Importin subunit beta-1 yes yes 2 0.00075556 123.35 By MS/MS 5.08 1.33 1 4 4 2 1 1 13 3778000 3778000 0 10002 1452 10373;10374 24835;24836;24837;24838;24839;24840;24841;24842;24843;24844;24845;24846;24847 17491;17492;17493;17494;17495;17496;17497;17498;17499;17500;17501;17502;17503 17492 1139 13 106420 0 MELPSGPGPER ______________________________ ______________________________ - M E E R L 0 1 0 0 0 0 2 2 0 0 1 0 1 0 3 1 0 0 0 0 0 0 11 0 1168.5547 Q9Y679 Q9Y679 1 11 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.025267 66.92 By MS/MS 7 0 2 2 3000700 3000700 0 10003 2997 10375;10376 24848;24849 17504;17505 17504 1726 2 53622 0 MELQPPEASIAVVSIPR ______________________________ LQPPEASIAVVSIPRQLPGSHSEAGVQGLS - M E P R Q 2 1 0 0 0 1 2 0 0 2 1 0 1 0 3 2 0 0 0 2 0 0 17 0 1835.9815 P08195 P08195 1 17 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0010856 109.44 By MS/MS 4 0 1 1 1288200 1288200 0 10004 499 10377 24850 17506 17506 298 1 35167 0 MELSAEYLR ______________________________ ______________________________ - M E L R E 1 1 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 9 0 1110.5379 Q9H3K6 Q9H3K6 1 9 BOLA2 BolA-like protein 2 yes yes 2 0.0023512 108.98 By MS/MS 10 0 2 2 438010 438010 0 10005 2487 10378;10379 24851;24852 17507;17508 17507 1515 2 465560 0 MELSAEYLREK ______________________________ ______________________________ - M E E K L 1 1 0 0 0 0 3 0 0 0 2 1 1 0 0 1 0 0 1 0 0 0 11 1 1367.6755 Q9H3K6 Q9H3K6 1 11 BOLA2 BolA-like protein 2 yes yes 2 0.027015 75.387 By MS/MS 10 0 1 1 0 0 0 10006 2487 10380 24853 17509 17509 1 0 0 MELSDANLQTLTEYLK ______________________________ ELSDANLQTLTEYLKKTLDPDPAIRRPAEK - M E L K K 1 0 1 1 0 1 2 0 0 0 4 1 1 0 0 1 2 0 1 0 0 0 16 0 1867.9237 P55060 P55060 1 16 CSE1L Exportin-2 yes yes 2 1.2801E-06 149.69 By MS/MS 4 0 1 1 93282 93282 0 10007 1025 10381 24854 17510;17511 17510 797 2 2546.5 0 MELSDANLQTLTEYLKK ______________________________ LSDANLQTLTEYLKKTLDPDPAIRRPAEKF - M E K K T 1 0 1 1 0 1 2 0 0 0 4 2 1 0 0 1 2 0 1 0 0 0 17 1 1996.0187 P55060 P55060 1 17 CSE1L Exportin-2 yes yes 2 7.0795E-11 166.38 By MS/MS 4 0 1 1 568060 568060 0 10008 1025 10382 24855 17512 17512 797 1 15507 0 MELVQVLK ______________________________ ______________________________ - M E L K R 0 0 0 0 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 2 0 0 8 0 958.55214 Q9UI09 Q9UI09 1 8 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes yes 2 0.027112 78.334 By MS/MS 10 0 1 1 75719 75719 0 10009 2784 10383 24856 17513 17513 1624 1 80482 0 MEMEKEFEQIDK ______________________________ ______________________________ - M E D K S 0 0 0 1 0 1 4 0 0 1 0 2 2 1 0 0 0 0 0 0 0 0 12 1 1555.6898 P18031 P18031 1 12 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 3.7744E-11 211.63 By MS/MS 6.5 0.5 1 1 2 2577100 2577100 0 10010 620 10384 24857;24858 17514 17514 1 21301 0 MENAHTK ______________________________ ______________________________ - M E T K T 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 7 0 829.37524 P16615 P16615 1 7 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.021494 99.139 By MS/MS 2.5 1.12 1 1 1 1 4 1931500 1931500 0 10011 608 10385 24859;24860;24861;24862 17515;17516 17515 2 87289 0 MENFQKVEK ______________________________ ______________________________ - M E E K I 0 0 1 0 0 1 2 0 0 0 0 2 1 1 0 0 0 0 0 1 0 0 9 1 1151.5645 P24941 P24941 1 9 CDK2 Cyclin-dependent kinase 2 yes yes 2 0.017647 83.883 By MS/MS 8 0 1 1 544490 544490 0 10012 682 10386 24863 17517 17517 456 1 35920 0 MENQVLTPHVYWAQR ______________________________ MENQVLTPHVYWAQRHRELYLRVELSDVQN - M E Q R H 1 1 1 0 0 2 1 0 1 0 1 0 1 0 1 0 1 1 1 2 0 0 15 0 1870.9148 Q9P035 Q9P035 1 15 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 1.4382E-10 187.78 By MS/MS 2.5 1.12 1 1 1 1 4 1850800 1850800 0 10013 2723 10387 24864;24865;24866;24867 17518;17519;17520 17518 1587 3 73202 0 MEPAVSEPMRDQVAR ______________________________ MEPAVSEPMRDQVARTHLTEDTPKVNADIE - M E A R T 2 2 0 1 0 1 2 0 0 0 0 0 2 0 2 1 0 0 0 2 0 0 15 1 1714.8131 Q15738 Q15738 1 15 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 3.5586E-05 156.36 By MS/MS 7 0 1 1 1456300 1456300 0 10014 1515 10388 24868 17521 17521 1 26024 0 MEPDGTYEPGFVGIR ______________________________ MEPDGTYEPGFVGIRFCQECNNMLYPKEDK - M E I R F 0 1 0 1 0 0 2 3 0 1 0 0 1 1 2 0 1 0 1 1 0 0 15 0 1666.7661 P36954 P36954 1 15 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes yes 2 0.0033067 91.313 By MS/MS 10 0 1 1 177940 177940 0 10015 811 10389 24869 17522 17522 555 1 189130 0 MEPLNNLQVAVK VEISLPLSTVGSVMKMEPLNNLQVAVKNNI VMKMEPLNNLQVAVKNNIDVFYFSTLYPLH K M E V K N 1 0 2 0 0 1 1 0 0 0 2 1 1 0 1 0 0 0 0 2 0 0 12 0 1354.7279 P63010;Q10567 Q10567 806 817 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 0.00010102 155.11 By MS/MS 4 0 1 1 977530 977530 0 10016 1300;1167 10390 24870 17523 17523 909 1 26685 0 MEQLMSITQEETESLR KSSEILKSLENERIRMEQLMSITQEETESL EQLMSITQEETESLRRRDVASAMQQMLTES R M E L R R 0 1 0 0 0 2 4 0 0 1 2 0 2 0 0 2 2 0 0 0 0 0 16 0 1923.8918 Q6UWE0 Q6UWE0 366 381 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 3 0.019146 74.853 By MS/MS 6.5 0.5 1 1 2 5043400 5043400 0 10017 1728 10391 24871;24872 17524 17524 1234 0 40756 0 MEQVNELKEK ______________________________ ______________________________ - M E E K G 0 0 1 0 0 1 3 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 10 1 1246.6227 P31948 P31948 1 10 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.00041829 128.35 By MS/MS 5 0 2 2 2103500 2103500 0 10018 762 10392;10393 24873;24874 17525;17526 17525 514 2 86462 0 MESAGLEQLLR ______________________________ ______________________________ - M E L R E 1 1 0 0 0 1 2 1 0 0 3 0 1 0 0 1 0 0 0 0 0 0 11 0 1245.6387 Q8TEX9 Q8TEX9 1 11 IPO4 Importin-4 yes yes 2 3.981E-09 195.36 By MS/MS 4.43 1.59 2 3 1 1 7 2006500 2006500 0 10019 2005 10394;10395 24875;24876;24877;24878;24879;24880;24881 17527;17528;17529;17530;17531 17528 1316 5 57276 0 MESAIAEGGASR ______________________________ ______________________________ - M E S R F 3 1 0 0 0 0 2 2 0 1 0 0 1 0 0 2 0 0 0 0 0 0 12 0 1177.5397 P78344 P78344 1 12 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 9.857E-06 169.52 By MS/MS 4 0 2 2 1806000 1806000 0 10020 1192 10396;10397 24882;24883 17532;17533 17532 934 2 49303 0 MESGIEPSVDLETLDER YLVTEGFKEAAEKFRMESGIEPSVDLETLD SGIEPSVDLETLDERIKIREMILKGQIQEA R M E E R I 0 1 0 2 0 0 4 1 0 1 2 0 1 0 1 2 1 0 0 1 0 0 17 0 1918.883 Q9NWU2 Q9NWU2 51 67 GID8 Glucose-induced degradation protein 8 homolog yes yes 2 2.4279E-25 225.72 By MS/MS 8 0 1 1 781070 781070 0 10021 2669 10398 24884 17534 17534 1572 1 51527 0 MESGLSDVTKDQ QHWISYNEASSQLLRMESGLSDVTKDQ___ LLRMESGLSDVTKDQ_______________ R M E D Q - 0 0 0 2 0 1 1 1 0 0 1 1 1 0 0 2 1 0 0 1 0 0 12 1 1308.5867 Q8WUY1 Q8WUY1 197 208 THEM6 Protein THEM6 yes yes 2 0.0024186 177.57 By MS/MS 9 0 1 1 233740 233740 0 10022 2020 10399 24885 17535 17535 1 134150 0 MESYDVIANQPVVIDNGSGVIK ______________________________ ANQPVVIDNGSGVIKAGFAGDQIPKYCFPN - M E I K A 1 0 2 2 0 1 1 2 0 3 0 1 1 0 1 2 0 0 1 4 0 0 22 0 2347.173 P61163 P61163 1 22 ACTR1A Alpha-centractin yes yes 2;3 4.6602E-07 120.23 By MS/MS 7 0 2 2 2176300 2176300 0 10023 1090 10400 24886;24887 17536;17537;17538 17538 857 3 38892 0 METFDPTELPELLK ______________________________ ______________________________ - M E L K L 0 0 0 1 0 0 3 0 0 0 3 1 1 1 2 0 2 0 0 0 0 0 14 0 1661.8222 P49642 P49642 1 14 PRIM1 DNA primase small subunit yes yes 2 0.00022348 127.83 By MS/MS 6 0 2 2 885090 885090 0 10024 923 10401;10402 24888;24889 17539;17540;17541 17539 688 3 6901.9 0 METIWIYQFR ______________________________ ______________________________ - M E F R L 0 1 0 0 0 1 1 0 0 2 0 0 1 1 0 0 1 1 1 0 0 0 10 0 1385.6802 Q14964 Q14964 1 10 RAB39A Ras-related protein Rab-39A yes yes 2 0.00060111 117.04 By MS/MS 9 0 1 1 137030 137030 0 10025 1451 10403 24890 17542 17542 1138 1 78645 0 MEVQEQEEDISSLIR DNSMNVDQDGDPSDRMEVQEQEEDISSLIR MEVQEQEEDISSLIRSCKFSMKMKMIDSAR R M E I R S 0 1 0 1 0 2 4 0 0 2 1 0 1 0 0 2 0 0 0 1 0 0 15 0 1804.8513 P78527 P78527 3218 3232 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 7.6783E-15 209.25 By MS/MS 2.5 1.12 2 2 2 2 8 1981000 1981000 0 10026 1197 10404;10405 24891;24892;24893;24894;24895;24896;24897;24898 17543;17544;17545;17546;17547;17548;17549 17543 964 7 71736 0 MEYLIGIQGPDYVLVASDR ______________________________ IGIQGPDYVLVASDRVAASNIVQMKDDHDK - M E D R V 1 1 0 2 0 1 1 2 0 2 2 0 1 0 1 1 0 0 2 2 0 0 19 0 2138.0718 P49721 P49721 1 19 PSMB2 Proteasome subunit beta type-2 yes yes 2 0.003503 76.262 By MS/MS 9 0 1 1 127130 127130 0 10027 927 10406 24899 17550;17551 17551 691 2 72959 0 MFADYLAHESR DEIKPSSAPELQAVRMFADYLAHESRRDSI QAVRMFADYLAHESRRDSIVAELDREMSRS R M F S R R 2 1 0 1 0 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 11 0 1338.6027 O14579 O14579 86 96 COPE Coatomer subunit epsilon yes yes 2;3 0.00032285 168.74 By MS/MS 8.2 0.4 4 1 5 10955000 10955000 0 10028 115 10407;10408 24900;24901;24902;24903;24904 17552;17553;17554;17555 17552 77 4 754350 0 MFAPAVMR ______________________________ ______________________________ - M F M R A 2 1 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 1 0 0 8 0 921.45646 Q9P0S2 Q9P0S2 1 8 COX16 Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial yes yes 2 0.052539 54.525 By MS/MS 10 0 1 1 145220 145220 0 10029 2730 10409 24905 17556 17556 1 154360 0 MFEDPETTR AQLKQLQAETEPIVKMFEDPETTRQMQSTR TEPIVKMFEDPETTRQMQSTRDGRMLFDYL K M F T R Q 0 1 0 1 0 0 2 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 9 0 1124.4808 P60228 P60228 94 102 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0011813 132.76 By MS/MS By MS/MS 6.43 0.495 4 3 4 3 10325000 10212000 112700 10030 1065 10410;10411 24906;24907;24908;24909;24910;24911;24912 17557;17558;17559;17560;17561 17559 829 5 100850 373320 MFEFQNFER MPEGGGALAEGFQVRMFEFQNFERRFEECI EGFQVRMFEFQNFERRFEECISQSAVKTKF R M F E R R 0 1 1 0 0 1 2 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 9 0 1246.5441 O95140 O95140 335 343 MFN2 Mitofusin-2 yes yes 2 0.00047642 148.94 By MS/MS 5 0 2 2 1115600 1115600 0 10031 366 10412;10413 24913;24914 17562;17563 17562 199 2 45857 0 MFEFYER GAMTPFFWLFEEREKMFEFYERVSGARMHA WLFEEREKMFEFYERVSGARMHAAYIRPGG K M F E R V 0 1 0 0 0 0 2 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 7 0 1020.4375 O75306 O75306 210 216 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.0084015 147.69 By MS/MS 7.75 0.829 2 1 1 4 9938300 9938300 0 10032 294 10414;10415 24915;24916;24917;24918 17564;17565 17564 163 2 221860 0 MFEIVFEDPK IQGGTSHHLGQNFSKMFEIVFEDPKIPGEK QNFSKMFEIVFEDPKIPGEKQFAYQNSWGL K M F P K I 0 0 0 1 0 0 2 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 10 0 1253.6002 P07814 P07814 1251 1260 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 3.4876E-07 191.17 By MS/MS 3.5 0.5 2 2 4 1327600 1327600 0 10033 493 10416;10417 24919;24920;24921;24922 17566;17567 17567 289 2 34956 0 MFEIVFEDPKIPGEK IQGGTSHHLGQNFSKMFEIVFEDPKIPGEK MFEIVFEDPKIPGEKQFAYQNSWGLTTRTI K M F E K Q 0 0 0 1 0 0 3 1 0 2 0 2 1 2 2 0 0 0 0 1 0 0 15 1 1777.8961 P07814 P07814 1251 1265 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 1.079E-05 174.23 By MS/MS 3.33 0.471 2 1 3 2558900 2558900 0 10034 493 10418 24923;24924;24925 17568;17569;17570 17569 289 3 67196 0 MFESFIESVPLLK TFRRIIVKNNAKKRKMFESFIESVPLLKSL RKMFESFIESVPLLKSLEVSERMKIVDVIG K M F L K S 0 0 0 0 0 0 2 0 0 1 2 1 1 2 1 2 0 0 0 1 0 0 13 0 1538.8055 P13861 P13861 251 263 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2 0.0053401 106.4 By MS/MS 6 0 1 1 607610 607610 0 10035 584 10419 24926 17571 17571 375 0 4738.1 0 MFFDALYDEDVVK QALVVTLEQPPNLLRMFFDALYDEDVVKED LRMFFDALYDEDVVKEDAFYSWESSKDPAE R M F V K E 1 0 0 3 0 0 1 0 0 0 1 1 1 2 0 0 0 0 1 2 0 0 13 0 1590.7276 Q04637 Q04637 1544 1556 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 1.0787E-11 195.83 By MS/MS 2.75 0.829 2 1 1 4 684920 684920 0 10036 1264 10420;10421 24927;24928;24929;24930 17572;17573;17574 17572 1027 3 30703 0 MFGIPVVVAVNAFK EKGFSNLKKQIENARMFGIPVVVAVNAFKT RMFGIPVVVAVNAFKTDTESELDLISRLSR R M F F K T 2 0 1 0 0 0 0 1 0 1 0 1 1 2 1 0 0 0 0 4 0 0 14 0 1490.8319 P11586 P11586 747 760 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0053513 98.033 By MS/MS 4 0 1 1 174160 174160 0 10037 556 10422 24931 17575;17576 17575 350 2 4754.3 0 MFGTYFR EAFSKIVHQSTGWERMFGTYFRVGFYGTKF HQSTGWERMFGTYFRVGFYGTKFGDLDEQE R M F F R V 0 1 0 0 0 0 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 7 0 920.42146 Q96N67;Q8NF50 Q96N67 1838 1844 DOCK7;DOCK8 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 8 yes no 2 0.054366 92.467 By MS/MS 2 0.816 1 1 1 3 598870 598870 0 10038 2230 10423 24932;24933;24934 17577 17577 1 27296 0 MFILQSK MTLVDETNMYEGVGRMFILQSKEAIHSQLL NMYEGVGRMFILQSKEAIHSQLLEKQKIAE R M F S K E 0 0 0 0 0 1 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 7 0 865.47316 O60925 O60925 67 73 PFDN1 Prefoldin subunit 1 yes yes 2 0.0238 111.65 By MS/MS 10 0 1 1 515190 515190 0 10039 274 10424 24935 17578 17578 153 1 547600 0 MFILSDGEGK VCFVGRLEKIHPTGKMFILSDGEGKNGTIE HPTGKMFILSDGEGKNGTIELMEPLDEEIS K M F G K N 0 0 0 1 0 0 1 2 0 1 1 1 1 1 0 1 0 0 0 0 0 0 10 0 1095.527 P35244 P35244 40 49 RPA3 Replication protein A 14 kDa subunit yes yes 2 0.001695 115.7 By MS/MS 10 0 1 1 244250 244250 0 10040 784 10425 24936 17579 17579 532 1 259610 0 MFLENETWELCPVK NYFKNYHRTRLDELRMFLENETWELCPVKS RMFLENETWELCPVKSNFSILQLHEFKFME R M F V K S 0 0 1 0 1 0 3 0 0 0 2 1 1 1 1 0 1 1 0 1 0 0 14 0 1794.8321 Q96JG6 Q96JG6 462 475 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 4.3827E-18 218.75 By MS/MS 3.5 0.5 1 1 2 350200 350200 0 10041 2208 10426 24937;24938 17580 17580 1409 1 9484.4 0 MFLVGLTGGIASGK ______________________________ ______________________________ - M F G K S 1 0 0 0 0 0 0 4 0 1 2 1 1 1 0 1 1 0 0 1 0 0 14 0 1349.7377 Q8WVC6 Q8WVC6 1 14 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 1.1169E-06 175.49 By MS/MS 9 0 1 1 540660 540660 0 10042 2028 10427 24939 17581 17581 1324 1 310290 0 MFLVNSFLK ______________________________ ______________________________ - M F L K G 0 0 1 0 0 0 0 0 0 0 2 1 1 2 0 1 0 0 0 1 0 0 9 0 1097.5943 P04632 P04632 1 9 CAPNS1 Calpain small subunit 1 yes yes 2 0.022241 76.1 By MS/MS 8 0 1 1 70926 70926 0 10043 454 10428 24940 17582 17582 242 1 4679 0 MFQAAGAAQATPSHDAK ______________________________ QAAGAAQATPSHDAKGGGSSTVQRSKSFSL - M F A K G 6 0 0 1 0 2 0 1 1 0 0 1 1 1 1 1 1 0 0 0 0 0 17 0 1700.7941 Q9BT23 Q9BT23 1 17 LIMD2 LIM domain-containing protein 2 yes yes 2 3.6015E-11 168.89 By MS/MS 10 0 1 1 506750 506750 0 10044 2345 10429 24941 17583 17583 1468 1 538620 0 MFTSTGSSGLYK ______________________________ ______________________________ - M F Y K A 0 0 0 0 0 0 0 2 0 0 1 1 1 1 0 3 2 0 1 0 0 0 12 0 1277.5962 Q8NBM4 Q8NBM4 1 12 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 0.00027779 142.98 By MS/MS 1.5 0.5 1 1 2 618320 618320 0 10045 1942 10430 24942;24943 17584 17584 1299 1 30374 0 MFVLDEADEMLSR FDMLNRRYLSPKYIKMFVLDEADEMLSRGF IKMFVLDEADEMLSRGFKDQIYDIFQKLNS K M F S R G 1 1 0 2 0 0 2 0 0 0 2 0 2 1 0 1 0 0 0 1 0 0 13 0 1554.7058 P60842;Q14240 P60842 178 190 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 1.4437E-59 305.4 By MS/MS By MS/MS 5.11 2.27 7 5 4 4 5 23 7 4 2 1 61 1 681110000 681050000 59783 10046 1074 10431;10432;10433 24944;24945;24946;24947;24948;24949;24950;24951;24952;24953;24954;24955;24956;24957;24958;24959;24960;24961;24962;24963;24964;24965;24966;24967;24968;24969;24970;24971;24972;24973;24974;24975;24976;24977;24978;24979;24980;24981;24982;24983;24984;24985;24986;24987;24988;24989;24990;24991;24992;24993;24994;24995;24996;24997;24998;24999;25000;25001;25002;25003;25004;25005 17585;17586;17587;17588;17589;17590;17591;17592;17593;17594;17595;17596;17597;17598;17599;17600;17601;17602;17603;17604;17605;17606;17607;17608;17609;17610;17611;17612;17613;17614;17615;17616;17617;17618;17619;17620;17621;17622;17623;17624;17625;17626;17627;17628;17629;17630;17631;17632;17633;17634;17635;17636;17637;17638;17639;17640;17641;17642;17643;17644;17645;17646;17647;17648;17649;17650;17651;17652;17653 17614 846;847 67 9259900 183350 MGAGIAVLFK PKTDSLAHCISEDCRMGAGIAVLFKKKFGG SEDCRMGAGIAVLFKKKFGGVQELLNQQKK R M G F K K 2 0 0 0 0 0 0 2 0 1 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1005.5681 Q9Y530 Q9Y530 40 49 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 2 0.0013891 117.16 By MS/MS 10 0 1 1 131870 131870 0 10047 2964 10434 25006 17654 17654 1710 1 140160 0 MGAGMGFGLER RMGQTMERIGSGVERMGAGMGFGLERMAAP GVERMGAGMGFGLERMAAPIDRVGQTIERM R M G E R M 1 1 0 0 0 0 1 4 0 0 1 0 2 1 0 0 0 0 0 0 0 0 11 0 1124.5107 P52272 P52272 486 496 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0076545 100.48 By MS/MS 5 0 2 2 1663200 1663200 0 10048 982 10435;10436 25007;25008 17655;17656 17656 739;740 2 68366 0 MGANNLER RMGPVMDRMATGLERMGANNLERMGLERMG MATGLERMGANNLERMGLERMGANSLERMG R M G E R M 1 1 2 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 8 0 903.42325 P52272 P52272 558 565 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0051892 127.46 By MS/MS 5 0 1 1 1477500 1477500 0 10049 982 10437 25009 17657 17657 741 1 60731 0 MGANSLER ERMGANNLERMGLERMGANSLERMGLERMG ERMGLERMGANSLERMGLERMGANSLERMG R M G E R M 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 8 0 876.41235 P52272 P52272 571 578 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.015115 110.12 By MS/MS By matching 5 0 3 2 1 4523600 4494200 29353 10050 982 10438;10439 25010;25011;25012 17658;17659 17658 742 2 184730 86856 MGAPESGLAEYLFDK KAIKELGDHVTNLRKMGAPESGLAEYLFDK MGAPESGLAEYLFDKHTLGDSDNES_____ K M G D K H 2 0 0 1 0 0 2 2 0 0 2 1 1 1 1 1 0 0 1 0 0 0 15 0 1626.76 P02794 P02794 159 173 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 2 0.007457 92.19 By MS/MS 9 0 1 1 126150 126150 0 10051 439 10440 25013 17660;17661 17660 230 2 72399 0 MGEAIETTQQLYPSLLER IKNRQRIQKLVLAGRMGEAIETTQQLYPSL AIETTQQLYPSLLERNPNLLFTLKVRQFIE R M G E R N 1 1 0 0 0 2 3 1 0 1 3 0 1 0 1 1 2 0 1 0 0 0 18 0 2078.0354 Q96S59 Q96S59 419 436 RANBP9 Ran-binding protein 9 yes yes 2 1.4221E-33 235.71 By MS/MS 4.5 0.5 1 1 2 792730 792730 0 10052 2254 10441 25014;25015 17662 17662 1421 1 22664 0 MGELPLDINIQEPR ______________________________ ______________________________ - M G P R W 0 1 1 1 0 1 2 1 0 2 2 0 1 0 2 0 0 0 0 0 0 0 14 0 1623.829 Q9BWM7 Q9BWM7 1 14 SFXN3 Sideroflexin-3 yes yes 2 3.5866E-08 165.58 By MS/MS 8 0 1 1 0 0 0 10053 2397 10442 25016 17663 17663 1480 1 0 0 MGESDDSILR NGQFKTYAICGAIRRMGESDDSILRLAKAD GAIRRMGESDDSILRLAKADGIVSKNF___ R M G L R L 0 1 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 10 0 1121.5023 P63220 P63220 62 71 RPS21 40S ribosomal protein S21 yes yes 2 6.5695E-05 166.09 By MS/MS By matching 10 0 2 1 1 2098900 1907100 191790 10054 1176 10443 25017;25018 17664 17664 914 1 2027100 4919400 MGFNIGVR KDYENDEDVNKQLDKMGFNIGVRLIEDFLA VNKQLDKMGFNIGVRLIEDFLARSNVGRCH K M G V R L 0 1 1 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 0 1 0 0 8 0 892.45891 O43617 O43617 47 54 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2 0.0057554 124.37 By MS/MS 9.5 0.5 1 1 2 633510 633510 0 10055 210 10444 25019;25020 17665;17666 17665 128 2 545940 0 MGFPPNIVESAAENMVK EEGIKKEQALQLAQKMGFPPNIVESAAENM FPPNIVESAAENMVKLYSLFLKYDATMIEI K M G V K L 2 0 2 0 0 0 2 1 0 1 0 1 2 1 2 1 0 0 0 2 0 0 17 0 1832.8801 Q9P2R7 Q9P2R7 226 242 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 0.00010689 122.1 By MS/MS 7 0 1 1 1110800 1110800 0 10056 2741 10445 25021 17667 17667 1600;1601 1 19849 0 MGGDIANR QEQTIAEDLVVTKYKMGGDIANRVLRSLVE LVVTKYKMGGDIANRVLRSLVEASSSGVSV K M G N R V 1 1 1 1 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 8 0 832.38614 Q9UQ80 Q9UQ80 23 30 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.014064 106.04 By MS/MS 7 0 1 1 836930 836930 0 10057 2859 10446 25022 17668 17668 1644 1 14956 0 MGGEAPELALDPVPQDASTK GALLLQGFIQDRAGRMGGEAPELALDPVPQ PELALDPVPQDASTKKLSECLKRIGDELDS R M G T K K 3 0 0 2 0 1 2 2 0 0 2 1 1 0 3 1 1 0 0 1 0 0 20 0 2024.9725 Q07812 Q07812 38 57 BAX Apoptosis regulator BAX yes yes 2 1.798E-05 130.06 By MS/MS 9 0 1 1 460930 460930 0 10058 1281 10447 25023 17669 17669 1036 1 264530 0 MGGEEAEIR HVALLSVFQAWDDARMGGEEAEIRFCEHKR AWDDARMGGEEAEIRFCEHKRLNMATLRMT R M G I R F 1 1 0 0 0 0 3 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 9 0 990.44404 Q08211 Q08211 930 938 DHX9 ATP-dependent RNA helicase A yes yes 2 0.028357 84.615 By MS/MS 1.5 0.5 1 1 2 170900 170900 0 10059 1287 10448 25024;25025 17670 17670 1037 1 8418.3 0 MGHAGAIIAGGK VVSFIAGLTAPPGRRMGHAGAIIAGGKGGA GRRMGHAGAIIAGGKGGAKEKISALQSAGV R M G G K G 3 0 0 0 0 0 0 4 1 2 0 1 1 0 0 0 0 0 0 0 0 0 12 0 1081.5702 P53597 P53597 297 308 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 0.001165 125.31 By MS/MS 8 0 1 1 591520 591520 0 10060 1002 10449 25026 17671 17671 767 1 39023 0 MGIGMAEFLDK LAEKYQTVIADICRRMGIGMAEFLDKHVTS ICRRMGIGMAEFLDKHVTSEQEWDKYCHYV R M G D K H 1 0 0 1 0 0 1 2 0 1 1 1 2 1 0 0 0 0 0 0 0 0 11 0 1210.5726 P37268 P37268 150 160 FDFT1 Squalene synthase yes yes 2 0.00074626 137.05 By MS/MS 7 0 1 1 106220 106220 0 10061 814 10450 25027 17672 17672 1 1898.2 0 MGITEYNNQCR IDKTLGIRGPEDVAKMGITEYNNQCRAIVM DVAKMGITEYNNQCRAIVMRYSAEWKSTVS K M G C R A 0 1 2 0 1 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 0 11 0 1384.5864 P41252 P41252 111 121 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 3.5471E-16 223.84 By MS/MS 3.4 1.02 1 2 1 1 5 3490400 3490400 0 10062 840 10451;10452 25028;25029;25030;25031;25032 17673;17674 17674 594 2 94575 0 MGLAMGGGGGASFDR MGPAMGPALGAGIERMGLAMGGGGGASFDR MGLAMGGGGGASFDRAIEMERGNFGGSFAG R M G D R A 2 1 0 1 0 0 0 6 0 0 1 0 2 1 0 1 0 0 0 0 0 0 15 0 1382.6071 P52272 P52272 607 621 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 4.1481E-06 140.78 By MS/MS 5 0 1 1 971180 971180 0 10063 982 10453 25033 17675 17675 743;744 1 39919 0 MGLGGNPYGPAGTGK PLTDKCYLTLTQAMKMGLGGNPYGPAGTGK MGLGGNPYGPAGTGKTESVKALGGLLGRQV K M G G K T 1 0 1 0 0 0 0 6 0 0 1 1 1 0 2 0 1 0 1 0 0 0 15 0 1375.6554 Q8NCM8 Q8NCM8 1681 1695 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.007457 92.19 By MS/MS 1 0 1 1 223880 223880 0 10064 1954 10454 25034 17676 17676 1303 1 10938 0 MGLIQTADQLR SVDIKKVLLEMRKFRMGLIQTADQLRFSYL RKFRMGLIQTADQLRFSYLAVIEGAKFIMG R M G L R F 1 1 0 1 0 2 0 1 0 1 2 0 1 0 0 0 1 0 0 0 0 0 11 0 1244.6547 P18031 P18031 258 268 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 1.8394E-05 172.88 By MS/MS 7.2 0.748 1 2 2 5 12897000 12897000 0 10065 620 10455;10456 25035;25036;25037;25038;25039 17677;17678;17679 17679 412 3 189170 0 MGPAMGPALGAGIER ERMGLERMGANSLERMGPAMGPALGAGIER MGPAMGPALGAGIERMGLAMGGGGGASFDR R M G E R M 3 1 0 0 0 0 1 4 0 1 1 0 2 0 2 0 0 0 0 0 0 0 15 0 1426.7061 P52272 P52272 592 606 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 6.3157E-08 168.22 By MS/MS 5 0 3 3 3084100 3084100 0 10066 982 10457;10458;10459 25040;25041;25042 17680;17681;17682 17680 745;746 3 126770 0 MGPGATAGGAEK VEQSFMTMAAEIKKRMGPGATAGGAEKSNV KKRMGPGATAGGAEKSNVKIQSTPVKQSGG R M G E K S 3 0 0 0 0 0 1 4 0 0 0 1 1 0 1 0 1 0 0 0 0 0 12 0 1045.4862 P62820 P62820 176 187 RAB1A Ras-related protein Rab-1A yes yes 2 1.2354E-05 172.98 By MS/MS 9 0 1 1 663270 663270 0 10067 1145 10460 25043 17683 17683 894 1 380660 0 MGPNIYELR QLLLEFSFWNEPQPRMGPNIYELRTYKLKP NEPQPRMGPNIYELRTYKLKPGTMIEWGNN R M G L R T 0 1 1 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 1 0 0 0 9 0 1091.5434 Q9BPW8 Q9BPW8 180 188 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2 1.9102E-06 185.72 By MS/MS By matching 8.6 0.8 3 1 1 4 1 54315000 54184000 130730 10068 2301 10461;10462 25044;25045;25046;25047;25048 17684;17685;17686;17687 17684 1452 4 3946300 1115300 MGPSGAALGVLILR HHLDISYNRLHLVPRMGPSGAALGVLILRG RMGPSGAALGVLILRGNELRSLHGLEQLRN R M G L R G 2 1 0 0 0 0 0 3 0 1 3 0 1 0 1 1 0 0 0 1 0 0 14 0 1353.7802 Q8N1F8 Q8N1F8 227 240 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.00016208 137.89 By MS/MS 3 0 1 1 688190 688190 0 10069 1899 10463 25049 17688 17688 1292 1 17965 0 MGQSLQEGRKQGR ______________________________ ______________________________ - M G G R L 0 2 0 0 0 3 1 3 0 0 1 1 1 0 0 1 0 0 0 0 0 0 13 2 1473.747 Q96KT6 Q96KT6 1 13 LINC00208 Putative uncharacterized protein encoded by LINC00208 yes yes 2 0.0060188 82.831 By MS/MS 3 0 1 1 111590 111590 0 10070 2222 10464 25050 17689 17689 1410 0 2913.1 0 MGSILSR ______________________________ ______________________________ - M G S R R 0 1 0 0 0 0 0 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 7 0 762.40581 O60291 O60291 1 7 MGRN1 E3 ubiquitin-protein ligase MGRN1 yes yes 2 0.013138 104.45 By MS/MS 8 0 1 1 2371300 2371300 0 10071 242 10465 25051 17690 17690 140 1 156440 0 MGSQVIIPYR ATGFLGRYVVNHLGRMGSQVIIPYRCDKYD NHLGRMGSQVIIPYRCDKYDIMHLRPMGDL R M G Y R C 0 1 0 0 0 1 0 1 0 2 0 0 1 0 1 1 0 0 1 1 0 0 10 0 1162.6169 Q16795 Q16795 76 85 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.00018403 154.01 By MS/MS 8 0 1 1 2921900 2921900 0 10072 1548 10466 25052 17691 17691 1174 1 192760 0 MGTLLSR QHLVDFLAAVGGHFRMGTLLSRQSVQLRLK AAVGGHFRMGTLLSRQSVQLRLKSPEGMSL R M G S R Q 0 1 0 0 0 0 0 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 7 0 776.42146 Q9Y2Z4 Q9Y2Z4 195 201 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 0.01407 124.83 By MS/MS 7 0 1 1 8846300 8846300 0 10073 2909 10467 25053 17692 17692 1675 1 158090 0 MGTPSCSR ARYFGDTDMYHRAQKMGTPSCSRLSEVQAS MYHRAQKMGTPSCSRLSEVQASLHG_____ K M G S R L 0 1 0 0 1 0 0 1 0 0 0 0 1 0 1 2 1 0 0 0 0 0 8 0 894.36877 Q9NXW2 Q9NXW2 358 365 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.046013 84.568 By MS/MS 7 0 1 1 319200 319200 0 10074 2694 10468 25054 17693 17693 1 5704.1 0 MGVNLTR SSPEMNLPTVSALRKMGVNLTRSNKETVKH PTVSALRKMGVNLTRSNKETVKHSDVLFLA K M G T R S 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 1 0 0 7 0 789.41671 Q96C36 Q96C36 48 54 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 0.021582 113.89 By MS/MS By matching 8.75 0.829 2 1 1 3 1 15788000 15750000 38304 10075 2136 10469 25055;25056;25057;25058 17694;17695 17694 1389 2 1260800 326780 MGVVPPGTQVEQLLYAK ERELDWAKVMVEKSRMGVVPPGTQVEQLLY VVPPGTQVEQLLYAKKLYDSAFHPDTGEKM R M G A K K 1 0 0 0 0 2 1 2 0 0 2 1 1 0 2 0 1 0 1 3 0 0 17 0 1828.9757 Q96NB2 Q96NB2 55 71 SFXN2 Sideroflexin-2 yes yes 2 0.00014514 131.06 By MS/MS 8 0.816 1 1 1 3 6536900 6536900 0 10076 2231 10470 25059;25060;25061 17696 17696 1418 1 450870 0 MHCCDEVQPK RQLESMIRLSEAMARMHCCDEVQPKHVKEA EAMARMHCCDEVQPKHVKEAFRLLNKSIIR R M H P K H 0 0 0 1 2 1 1 0 1 0 0 1 1 0 1 0 0 0 0 1 0 0 10 0 1302.5155 Q14566 Q14566 634 643 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.00066401 124.23 By MS/MS 4 0 1 1 127630 127630 0 10077 1436 10471 25062 17697 17697 1128 1 3484 0 MHLSQIQR YTRKAEFRKLCDNLRMHLSQIQRHHNQSTA KLCDNLRMHLSQIQRHHNQSTAINLNNPES R M H Q R H 0 1 0 0 0 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 8 0 1011.5284 Q14152 Q14152 203 210 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0012652 159.2 By MS/MS 2.5 0.957 1 2 2 1 6 4165600 4165600 0 10078 1409 10472 25063;25064;25065;25066;25067;25068 17698;17699 17698 1087 2 120890 0 MHPAGLAAAAAGTPR ______________________________ MHPAGLAAAAAGTPRLRKWPSKRRIPVSQP - M H P R L 6 1 0 0 0 0 0 2 1 0 1 0 1 0 2 0 1 0 0 0 0 0 15 0 1390.714 Q5BJH7 Q5BJH7 1 15 YIF1B Protein YIF1B yes yes 2 6.3646E-23 202.16 By MS/MS 4.5 3.5 1 1 2 1030400 1030400 0 10079 1599 10473 25069;25070 17700;17701 17700 1193 2 67977 0 MHSLATAAPVPTTLAQVDREK ______________________________ AAPVPTTLAQVDREKIYQWINELSSPETRE - M H E K I 4 1 0 1 0 1 1 0 1 0 2 1 1 0 2 1 3 0 0 2 0 0 21 1 2235.1682 Q92600 Q92600 1 21 RQCD1 Cell differentiation protein RCD1 homolog yes yes 3 0.00065393 94.281 By MS/MS 8 0 1 1 1438100 1438100 0 10080 2064 10474 25071 17702 17702 1339 1 94873 0 MHSLLIK TAVWVARNRFAVLDRMHSLLIKNLKNEITK NRFAVLDRMHSLLIKNLKNEITKKVQVPNC R M H I K N 0 0 0 0 0 0 0 0 1 1 2 1 1 0 0 1 0 0 0 0 0 0 7 0 840.48914 P53621 P53621 432 438 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.043933 97.071 By MS/MS 2 0.816 1 1 1 3 1092600 1092600 0 10081 1005 10475 25072;25073;25074 17703 17703 1 40269 0 MIAGQVLDINLAAEPK NERNARAAVAGEDGRMIAGQVLDINLAAEP IAGQVLDINLAAEPKVNRGKAGVKRSAAEM R M I P K V 3 0 1 1 0 1 1 1 0 2 2 1 1 0 1 0 0 0 0 1 0 0 16 0 1681.9073 P07910 P07910 74 89 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 2 1.9299E-21 228.7 By MS/MS 7 0 1 1 3062200 3062200 0 10082 495 10476 25075 17704 17704 294 1 54722 0 MIDAGDALIYMEPEK KGQKVQDVKKTIQKKMIDAGDALIYMEPEK MIDAGDALIYMEPEKQVMSRSSDECVVALC K M I E K Q 2 0 0 2 0 0 2 1 0 2 1 1 2 0 1 0 0 0 1 0 0 0 15 0 1694.7895 Q9P2J5 Q9P2J5 498 512 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0057815 101.6 By MS/MS 3 0 1 1 143360 143360 0 10083 2738 10477 25076 17705 17705 1 3742.4 0 MIDAGDALIYMEPEKQVMSR KGQKVQDVKKTIQKKMIDAGDALIYMEPEK DALIYMEPEKQVMSRSSDECVVALCDQWYL K M I S R S 2 1 0 2 0 1 2 1 0 2 1 1 3 0 1 1 0 0 1 1 0 0 20 1 2296.0902 Q9P2J5 Q9P2J5 498 517 LARS Leucine--tRNA ligase, cytoplasmic yes yes 3 0.0024924 73.279 By MS/MS 3 0 1 1 583530 583530 0 10084 2738 10478 25077 17706 17706 1595;1596;1597 1 15233 0 MIDLIIPR VNTREEVEDLCRLDKMIDLIIPRGSSQLVR DLCRLDKMIDLIIPRGSSQLVRDIQKAAKG K M I P R G 0 1 0 1 0 0 0 0 0 3 1 0 1 0 1 0 0 0 0 0 0 0 8 0 969.56812 P54886 P54886 551 558 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0045205 138.9 By MS/MS By MS/MS 4.4 1.8 1 1 1 1 3 2 1 9 1 19791000 19705000 86401 10085 1019 10479;10480 25078;25079;25080;25081;25082;25083;25084;25085;25086;25087 17707;17708;17709;17710;17711;17712;17713;17714;17715;17716 17716 791 10 677420 255660 MIDLSGNPVLR LHLHSSVVRGSESHKMIDLSGNPVLRIYYT ESHKMIDLSGNPVLRIYYTSRPALFTLCAG K M I L R I 0 1 1 1 0 0 0 1 0 1 2 0 1 0 1 1 0 0 0 1 0 0 11 0 1213.6489 O14735 O14735 122 132 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes yes 2 6.1298E-07 179.81 By MS/MS 4.33 3.73 2 1 1 1 1 6 8050400 8050400 0 10086 123 10481;10482 25088;25089;25090;25091;25092;25093 17717;17718;17719;17720;17721;17722 17718 79 6 2776200 0 MIEQDDFDINTR VLGSHLIDDYGNTYRMIEQDDFDINTRLHT TYRMIEQDDFDINTRLHTIVRGEDEAAMVE R M I T R L 0 1 1 3 0 1 1 0 0 2 0 0 1 1 0 0 1 0 0 0 0 0 12 0 1495.6613 Q9Y223 Q9Y223 60 71 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 4.2789E-07 177.04 By MS/MS 5 0 1 1 1651900 1651900 0 10087 2862 10483 25094 17723 17723 1651 1 67900 0 MIETAQVDER QNKGIEELFLDLCKRMIETAQVDERAKGNG DLCKRMIETAQVDERAKGNGSSQPGTARRG R M I E R A 1 1 0 1 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1190.5601 Q9UL25 Q9UL25 180 189 RAB21 Ras-related protein Rab-21 yes yes 2 9.0362E-07 178.84 By MS/MS 9 0 1 1 1039100 1039100 0 10088 2819 10484 25095 17724 17724 1631 1 596330 0 MIEVVCNDR ______________________________ ______________________________ - M I D R L 0 1 1 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 2 0 0 9 0 1134.5162 Q9BZL1 Q9BZL1 1 9 UBL5 Ubiquitin-like protein 5 yes yes 2 0.00072346 140.83 By MS/MS 10 0 1 1 785450 785450 0 10089 2424 10485 25096 17725 17725 1495 1 834850 0 MIFVGIK MEYLENPKKYIPGTKMIFVGIKKKEERADL KKYIPGTKMIFVGIKKKEERADLIAYLKKA K M I I K K 0 0 0 0 0 0 0 1 0 2 0 1 1 1 0 0 0 0 0 1 0 0 7 0 806.47243 P99999 P99999 81 87 CYCS Cytochrome c yes yes 2 0.033626 101.72 By MS/MS 10 0 1 1 381250 381250 0 10090 1227 10486 25097 17726 17726 998 1 405230 0 MIGEFVSDR EVAQWLRENPRLDKKMIGEFVSDRKNIDLL PRLDKKMIGEFVSDRKNIDLLESFVSTFSF K M I D R K 0 1 0 1 0 0 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 0 9 0 1052.4961 Q92538 Q92538 750 758 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.015745 99.139 By MS/MS 2 0 1 1 159570 159570 0 10091 2055 10487 25098 17727 17727 1 7931.5 0 MIGEFVSDRK EVAQWLRENPRLDKKMIGEFVSDRKNIDLL RLDKKMIGEFVSDRKNIDLLESFVSTFSFQ K M I R K N 0 1 0 1 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 1 0 0 10 1 1180.591 Q92538 Q92538 750 759 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.015005 107.57 By MS/MS 2.5 0.5 1 1 2 353720 353720 0 10092 2055 10488 25099;25100 17728 17728 1336 1 14346 0 MIGFSETAK EESNFPFIKICSPDKMIGFSETAKCQAMKK ICSPDKMIGFSETAKCQAMKKIFDDAYKSQ K M I A K C 1 0 0 0 0 0 1 1 0 1 0 1 1 1 0 1 1 0 0 0 0 0 9 0 982.47937 P46459 P46459 573 581 NSF Vesicle-fusing ATPase yes yes 2 0.050458 76.679 By MS/MS By matching 4.5 0.5 1 1 1 1 829620 802050 27575 10093 881 10489 25101;25102 17729 17729 1 32967 57619 MIGQATAADQEK SDTATYKVKDSSVGKMIGQATAADQEKNPE VGKMIGQATAADQEKNPEGDGLLEYSTFNF K M I E K N 3 0 0 1 0 2 1 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 12 0 1261.5973 Q13015 Q13015 48 59 MLLT11 Protein AF1q yes yes 2 3.4445E-07 180.66 By MS/MS 10 0 1 1 249430 249430 0 10094 1325 10490 25103 17730 17730 1047 1 265120 0 MIGQICEVAK LRELSMECGLNNRIRMIGQICEVAKTKKFE NNRIRMIGQICEVAKTKKFEEHAVEALWKA R M I A K T 1 0 0 0 1 1 1 1 0 2 0 1 1 0 0 0 0 0 0 1 0 0 10 0 1147.573 P49815 P49815 60 69 TSC2 Tuberin yes yes 2 0.0019666 114.4 By MS/MS 1.5 0.5 1 1 2 264380 264380 0 10095 935 10491 25104;25105 17731 17731 696 1 13045 0 MIIEEAK KNSRAVTIFIRGGNKMIIEEAKRSLHDALC IFIRGGNKMIIEEAKRSLHDALCVIRNLIR K M I A K R 1 0 0 0 0 0 2 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 7 0 832.43644 P48643 P48643 393 399 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.017924 132.09 By MS/MS 6 0 1 1 3840400 3840400 0 10096 909 10492 25106 17732 17732 1 29948 0 MIIEEAKR KNSRAVTIFIRGGNKMIIEEAKRSLHDALC FIRGGNKMIIEEAKRSLHDALCVIRNLIRD K M I K R S 1 1 0 0 0 0 2 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 8 1 988.53755 P48643 P48643 393 400 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.023862 122.18 By MS/MS 6 0 1 1 44361000 44361000 0 10097 909 10493 25107 17733 17733 1 345930 0 MININILSVCK EYFLDVPDLDNVIKKMININILSVCKMTQL VIKKMININILSVCKMTQLVLPGMVERSKG K M I C K M 0 0 2 0 1 0 0 0 0 3 1 1 1 0 0 1 0 0 0 1 0 0 11 0 1303.6992 Q53GQ0 Q53GQ0 157 167 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 5.8849E-06 175.65 By MS/MS 8.33 0.471 2 1 3 6287300 6287300 0 10098 1584 10494;10495 25108;25109;25110 17734;17735 17734 1186 2 448060 0 MINLSVPDTIDER DDLFKAVGDGIVLCKMINLSVPDTIDERAI CKMINLSVPDTIDERAINKKKLTPFIIQEN K M I E R A 0 1 1 2 0 0 1 0 0 2 1 0 1 0 1 1 1 0 0 1 0 0 13 0 1501.7446 P13797;P13796 P13797 169 181 PLS3;LCP1 Plastin-3;Plastin-2 yes no 2 8.8548E-08 184.55 By MS/MS 5 0 1 1 695270 695270 0 10099 580 10496 25111 17736 17736 373 1 28579 0 MIQDGKGDVTITNDGATILK ADAIRTSLGPKGMDKMIQDGKGDVTITNDG KGDVTITNDGATILKQMQVLHPAARMLVEL K M I L K Q 1 0 1 3 0 1 0 3 0 3 1 2 1 0 0 0 3 0 0 1 0 0 20 1 2089.0725 P50991 P50991 60 79 CCT4 T-complex protein 1 subunit delta yes yes 2;3 1.5377E-23 233.84 By MS/MS 6.88 1.62 1 4 1 1 1 8 75169000 75169000 0 10100 956 10497;10498 25112;25113;25114;25115;25116;25117;25118;25119 17737;17738;17739;17740;17741;17742 17742 716 6 1491000 0 MIQVYFPK PSGTLRKASWEERDRMIQVYFPKEGRKILT SWEERDRMIQVYFPKEGRKILTPIIFKEEN R M I P K E 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 0 0 0 1 1 0 0 8 0 1024.5416 P82650 P82650 192 199 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.0026418 152.63 By MS/MS 7.33 0.471 2 1 3 15298000 15298000 0 10101 1201 10499;10500 25120;25121;25122 17743;17744 17744 986 2 287670 0 MISDAIPELK EKNLGIGKVSSFEEKMISDAIPELKASIKK SFEEKMISDAIPELKASIKKGEDFVKTLK_ K M I L K A 1 0 0 1 0 0 1 0 0 2 1 1 1 0 1 1 0 0 0 0 0 0 10 0 1115.5896 P40926 P40926 315 324 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0025832 111.46 By MS/MS By matching 8.75 0.829 2 1 1 3 1 2506600 2477200 29405 10102 832 10501 25123;25124;25125;25126 17745 17745 579 1 289450 250860 MISGMYLGEIVR VDEYSLNAGKQRYEKMISGMYLGEIVRNIL YEKMISGMYLGEIVRNILIDFTKKGFLFRG K M I V R N 0 1 0 0 0 0 1 2 0 2 1 0 2 0 0 1 0 0 1 1 0 0 12 0 1367.6941 P19367;P52789;P52790 P19367 744 755 HK1;HK2;HK3 Hexokinase-1;Hexokinase-2;Hexokinase-3 no no 2 0.00013696 138.22 By MS/MS 4 0 1 1 2286100 2286100 0 10103 630;992 10502 25127 17746 17746 423;424 1 62407 0 MIVQENK DDIRVPFGHAHNHAKMIVQENKGLKVLIEA GHAHNHAKMIVQENKGLKVLIEATKAFLDN K M I N K G 0 0 1 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 7 0 860.44259 Q6NXE6 Q6NXE6 268 274 ARMC6 Armadillo repeat-containing protein 6 yes yes 2 0.039569 98.997 By MS/MS 7 0 1 1 1225500 1225500 0 10104 1694 10503 25128 17747 17747 1216 1 21900 0 MIVVLGEIGGTEEYK FMDHVLRYQDTPGVKMIVVLGEIGGTEEYK MIVVLGEIGGTEEYKICRGIKEGRLTKPIV K M I Y K I 0 0 0 0 0 0 3 3 0 2 1 1 1 0 0 0 1 0 1 2 0 0 15 0 1636.8382 P53396 P53396 712 726 ACLY ATP-citrate synthase yes yes 2 3.6238E-29 248.21 By MS/MS 4 0 1 1 828370 828370 0 10105 1001 10504 25129 17748 17748 761 1 22614 0 MKEIAEAYLGK KSFYPEEVSSMVLTKMKEIAEAYLGKTVTN VLTKMKEIAEAYLGKTVTNAVVTVPAYFND K M K G K T 2 0 0 0 0 0 2 1 0 1 1 2 1 0 0 0 0 0 1 0 0 0 11 1 1251.6533 P11142 P11142 127 137 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.0010495 150.46 By MS/MS By matching 5.25 0.433 6 2 6 2 50228000 50166000 61860 10106 546 10505;10506 25130;25131;25132;25133;25134;25135;25136;25137 17749;17750;17751;17752 17750 335 4 1981900 183040 MKELSQDSTGR GKEEIDSILNKVEERMKELSQDSTGRVKRL VEERMKELSQDSTGRVKRLPPIVRGGAIDR R M K G R V 0 1 0 1 0 1 1 1 0 0 1 1 1 0 0 2 1 0 0 0 0 0 11 1 1250.5925 P52788 P52788 97 107 SMS Spermine synthase yes yes 3 0.0028645 101.56 By MS/MS 7.5 0.5 1 1 2 774140 774140 0 10107 991 10507 25138;25139 17753 17753 749 1 17124 0 MKETAEAYLGK KTFAPEEISAMVLTKMKETAEAYLGKKVTH VLTKMKETAEAYLGKKVTHAVVTVPAYFND K M K G K K 2 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 1 0 1 0 0 0 11 1 1239.6169 P11021 P11021 153 163 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0026897 103.21 By MS/MS 4.5 0.5 1 1 2 1957800 1957800 0 10108 545 10508 25140;25141 17754 17754 332 1 79339 0 MKETAEAYLGKK KTFAPEEISAMVLTKMKETAEAYLGKKVTH LTKMKETAEAYLGKKVTHAVVTVPAYFNDA K M K K K V 2 0 0 0 0 0 2 1 0 0 1 3 1 0 0 0 1 0 1 0 0 0 12 2 1367.7119 P11021 P11021 153 164 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0011849 130.56 By MS/MS By matching 5 0 2 1 1 4363000 4351800 11170 10109 545 10509 25142;25143 17755 17755 332 1 178880 33051 MKETAENYLGHTAK KLYSPSQIGAFVLMKMKETAENYLGHTAKN KMKETAENYLGHTAKNAVITVPAYFNDSQR K M K A K N 2 0 1 0 0 0 2 1 1 0 1 2 1 0 0 0 2 0 1 0 0 0 14 1 1591.7664 P38646 P38646 174 187 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 0.00072713 121.21 By MS/MS 5.33 0.471 2 1 3 9210100 9210100 0 10110 820 10510 25144;25145;25146 17756;17757 17756 2 353350 0 MKFTLGLGSR ______________________________ ______________________________ - M K S R A 0 1 0 0 0 0 0 2 0 0 2 1 1 1 0 1 1 0 0 0 0 0 10 1 1108.6063 P15863 P15863 1 10 PAX1 Paired box protein Pax-1 yes yes 2 0.014258 93.429 By MS/MS 5 0 1 1 95461 95461 0 10111 601 10511 25147 17758 17758 385 0 3923.8 0 MKHYEVEILDAK ______________________________ ______________________________ - M K A K T 1 0 0 1 0 0 2 0 1 1 1 2 1 0 0 0 0 0 1 1 0 0 12 1 1474.749 Q9NZ01 Q9NZ01 1 12 TECR Very-long-chain enoyl-CoA reductase yes yes 3 0.0011219 118.76 By MS/MS 1 0 2 2 3141600 3141600 0 10112 2703 10512;10513 25148;25149 17759;17760 17760 1581 2 153490 0 MKPILLQGHER ______________________________ ______________________________ - M K E R S 0 1 0 0 0 1 1 1 1 1 2 1 1 0 1 0 0 0 0 0 0 0 11 1 1320.7336 Q13347 Q13347 1 11 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 3 0.002848 101.71 By MS/MS 8.5 1.12 1 1 1 1 4 11268000 11268000 0 10113 1358 10514 25150;25151;25152;25153 17761;17762 17761 1063 2 856390 0 MKQDAQVVLYR VAEQKREKEIKSELKMKQDAQVVLYRSYRH SELKMKQDAQVVLYRSYRHGDLPDIQIKHS K M K Y R S 1 1 0 1 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1 2 0 0 11 1 1349.7126 P78527 P78527 2763 2773 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.00050293 131.83 By MS/MS 2 0.816 1 1 1 3 1993700 1993700 0 10114 1197 10515 25154;25155;25156 17763;17764 17763 965 2 88133 0 MKQEPVKPEEGR KDLRNDEHTRRELAKMKQEPVKPEEGRDMA LAKMKQEPVKPEEGRDMANRIGAFGYMECS K M K G R D 0 1 0 0 0 1 3 1 0 0 0 2 1 0 2 0 0 0 0 1 0 0 12 2 1426.7238 P61586 P61586 134 145 RHOA Transforming protein RhoA yes yes 2;3 0.012005 120.77 By MS/MS By matching 9 0 4 3 1 2693400 2686200 7191.3 10115 1101 10516;10517 25157;25158;25159;25160 17765;17766;17767 17766 863 3 1541600 77502 MKYDESDNAFIR FKENNVVFNRFFEMKMKYDESDNAFIRASR EMKMKYDESDNAFIRASRALTDKVTDLLGG K M K I R A 1 1 1 2 0 0 1 0 0 1 0 1 1 1 0 1 0 0 1 0 0 0 12 1 1487.6715 O43615 O43615 263 274 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 5.1085E-05 184.44 By MS/MS 7.4 0.49 3 2 5 21596000 21596000 0 10116 209 10518;10519 25161;25162;25163;25164;25165 17768;17769;17770 17768 125 3 427930 0 MLAEDELR NDRERVNEAREELMRMLAEDELRDAVLLVF AREELMRMLAEDELRDAVLLVFANKQDLPN R M L L R D 1 1 0 1 0 0 2 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 8 0 975.46953 P84077;P61204 P84077 110 117 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 0.0084111 116.73 By MS/MS 9.5 0.5 1 1 2 1739700 1739700 0 10117 1093 10520 25166;25167 17771 17771 858 1 1044300 0 MLAEVLGGINCVK KGIGGMDGTQQQIFKMLAEVLGGINCVKAS FKMLAEVLGGINCVKASVLTPYYHKVDFEC K M L V K A 1 0 1 0 1 0 1 2 0 1 2 1 1 0 0 0 0 0 0 2 0 0 13 0 1402.7312 Q53R41 Q53R41 706 718 FASTKD1 FAST kinase domain-containing protein 1 yes yes 2 0.00022953 141.08 By MS/MS 5 0 1 1 548400 548400 0 10118 1590 10521 25168 17772 17772 1192 1 22541 0 MLAITANTLR ELECNDVVLFWRIQRMLAITANTLRQQLTN WRIQRMLAITANTLRQQLTNTEVRRLEKNV R M L L R Q 2 1 1 0 0 0 0 0 0 1 2 0 1 0 0 0 2 0 0 0 0 0 10 0 1102.6169 O60313 O60313 886 895 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0035409 106.88 By MS/MS 4 0 1 1 1147200 1147200 0 10119 244 10522 25169 17773 17773 141 1 31318 0 MLAIYDGFDGFAK AVRSAVRVGIADGHRMLAIYDGFDGFAKGQ HRMLAIYDGFDGFAKGQIKEIGWTDVGGWT R M L A K G 2 0 0 2 0 0 0 2 0 1 1 1 1 2 0 0 0 0 1 0 0 0 13 0 1446.6853 Q01813 Q01813 443 455 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 0.00037394 136.96 By MS/MS 5.5 0.5 1 1 2 563040 563040 0 10120 1246 10523 25170;25171 17774 17774 1011 1 17807 0 MLALALLDR EVVCRDACDGHEIGRMLALALLDRIVSVDK GHEIGRMLALALLDRIVSVDKQQQWLLYLS R M L D R I 2 1 0 1 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 9 0 1014.5896 Q92621 Q92621 1494 1502 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.014886 95.741 By MS/MS 2.5 1.12 1 1 1 1 4 635670 635670 0 10121 2070 10524 25172;25173;25174;25175 17775 17775 1359 1 24194 0 MLAMPIDLDTLSPEER QDGSTIHIRYREPRRMLAMPIDLDTLSPEE LAMPIDLDTLSPEERRARLRKREAQLQSRK R M L E R R 1 1 0 2 0 0 2 0 0 1 3 0 2 0 2 1 1 0 0 0 0 0 16 0 1829.8903 Q7Z7F7 Q7Z7F7 74 89 MRPL55 39S ribosomal protein L55, mitochondrial yes yes 2 0.00073347 111.79 By MS/MS 10 0 1 1 133610 133610 0 10122 1807 10525 25176 17776 17776 1268;1269 1 142010 0 MLAQQAVK YLAILGSVTFLAGNRMLAQQAVKRTAH___ TFLAGNRMLAQQAVKRTAH___________ R M L V K R 2 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 8 0 887.48987 P04844 P04844 620 627 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.0019416 155.73 By MS/MS 1.8 0.748 2 2 1 5 4148200 4148200 0 10123 459 10526;10527 25177;25178;25179;25180;25181 17777;17778 17777 243 2 201980 0 MLATLEPEQR PTVEQQGEMARSGGRMLATLEPEQRAEIIH RSGGRMLATLEPEQRAEIIHHLADLLTDQR R M L Q R A 1 1 0 0 0 1 2 0 0 0 2 0 1 0 1 0 1 0 0 0 0 0 10 0 1186.6016 P54886 P54886 376 385 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 4.9426E-05 171.36 By MS/MS By MS/MS 5.2 0.4 4 1 3 2 17074000 16864000 210420 10124 1019 10528;10529 25182;25183;25184;25185;25186 17779;17780;17781 17781 792 3 642920 622620 MLDAEDIVNTARPDEK NNAFEVAEKYLDIPKMLDAEDIVNTARPDE LDAEDIVNTARPDEKAIMTYVSSFYHAFSG K M L E K A 2 1 1 3 0 0 2 0 0 1 1 1 1 0 1 0 1 0 0 1 0 0 16 1 1815.8673 O43707 O43707 240 255 ACTN4 Alpha-actinin-4 yes yes 3 0.0053619 88.78 By MS/MS 4 0 1 1 1474400 1474400 0 10125 217 10530 25187 17782 17782 130 1 40250 0 MLDFFTIFSK ______________________________ ______________________________ - M L S K G 0 0 0 1 0 0 0 0 0 1 1 1 1 3 0 1 1 0 0 0 0 0 10 0 1247.626 P08240 P08240 1 10 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.051121 73.233 By MS/MS 5.5 0.5 1 1 2 77580 77580 0 10126 502 10531 25188;25189 17783 17783 1 1722.6 0 MLDMGFEPQIR GLDFCKYLVLDEADRMLDMGFEPQIRRIVE EADRMLDMGFEPQIRRIVEQDTMPPKGVRH R M L I R R 0 1 0 1 0 1 1 1 0 1 1 0 2 1 1 0 0 0 0 0 0 0 11 0 1335.6315 O00571;O15523;Q92841;P17844 O00571 352 362 DDX3X;DDX3Y;DDX17;DDX5 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 2 0.00028811 130.98 By MS/MS By matching 4.8 0.4 1 4 4 1 5080000 4987900 92146 10127 105;616;2082 10532;10533;10534 25190;25191;25192;25193;25194 17784;17785;17786 17784 73;74 3 202650 272660 MLEDCVQETIHEHNK RIICITNAKSDSHVRMLEDCVQETIHEHNK MLEDCVQETIHEHNKLAANSDHLMQIQKCE R M L N K L 0 0 1 1 1 1 3 0 2 1 1 1 1 0 0 0 1 0 0 1 0 0 15 0 1881.8349 Q9NVM9 Q9NVM9 174 188 ASUN Protein asunder homolog yes yes 2 0.016857 78.655 By MS/MS 1 0 2 2 986290 986290 0 10128 2657 10535 25195;25196 17787;17788 17788 1569 2 48188 0 MLEDRDLFVMR LEREKALEHKNRMSRMLEDRDLFVMRLKAA RMSRMLEDRDLFVMRLKAARQSVYEEKLKQ R M L M R L 0 2 0 2 0 0 1 0 0 0 2 0 2 1 0 0 0 0 0 1 0 0 11 1 1423.6952 Q14152 Q14152 753 763 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0071261 92.866 By MS/MS By matching 3.43 0.495 4 3 6 1 5534700 5488600 46150 10129 1409 10536;10537 25197;25198;25199;25200;25201;25202;25203 17789;17790;17791;17792 17792 1088;1089 4 144410 66142 MLEIDPQK EVNEAFSLVVLANIKMLEIDPQKVNINGGA VVLANIKMLEIDPQKVNINGGAVSLGHPIG K M L Q K V 0 0 0 1 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 8 0 972.49502 P24752 P24752 366 373 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.04858 91.9 By MS/MS By matching 7 0 3 2 1 16259000 16235000 23897 10130 680 10538;10539 25204;25205;25206 17793;17794 17794 2 290130 98102 MLEILEGK NMQKMLPEIDQNKDRMLEILEGKGLSFLFP IDQNKDRMLEILEGKGLSFLFPLLKLEKEL R M L G K G 0 0 0 0 0 0 2 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 8 0 931.50485 P78344 P78344 715 722 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0082469 117.04 By MS/MS 4.5 0.5 2 2 4 2904200 2904200 0 10131 1192 10540;10541 25207;25208;25209;25210 17795;17796 17795 935 2 83525 0 MLELVAQK KPALSEEERQEQTKRMLELVAQKQREREER RQEQTKRMLELVAQKQREREEREEREALER R M L Q K Q 1 0 0 0 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 8 0 930.52084 Q04323 Q04323 98 105 UBXN1 UBX domain-containing protein 1 yes yes 2 0.011543 110.81 By MS/MS 7 0 1 1 2026600 2026600 0 10132 1262 10542 25211 17797 17797 1020 1 36216 0 MLENTDNSSPSTEHSQGLEK NFQIISTYKHMKLHKMLENTDNSSPSTEHS DNSSPSTEHSQGLEKQGVHAAGAAEAGPLA K M L E K Q 0 0 2 1 0 1 3 1 1 0 2 1 1 0 1 4 2 0 0 0 0 0 20 0 2202.9699 Q96H79 Q96H79 249 268 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.01018 67.644 By MS/MS 8 0 1 1 907390 907390 0 10133 2188 10543 25212 17798 17798 1399 1 59861 0 MLEVFHAIK AIQRFDNLRMLIVEKMLEVFHAIKSVKIYR MLIVEKMLEVFHAIKSVKIYRGALWILGEY K M L I K S 1 0 0 0 0 0 1 0 1 1 1 1 1 1 0 0 0 0 0 1 0 0 9 0 1086.5896 P53618 P53618 442 450 COPB1 Coatomer subunit beta yes yes 2;3 0.00070265 141.52 By MS/MS 4 0 2 2 3964400 3964400 0 10134 1004 10544;10545 25213;25214 17799;17800 17799 771 2 108220 0 MLFDYLADK DPETTRQMQSTRDGRMLFDYLADKHGFRQE STRDGRMLFDYLADKHGFRQEYLDTLYRYA R M L D K H 1 0 0 2 0 0 0 0 0 0 2 1 1 1 0 0 0 0 1 0 0 0 9 0 1114.5369 P60228 P60228 112 120 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0070325 104.2 By MS/MS By matching 6.67 0.745 3 2 1 5 1 9883600 9867600 16012 10135 1065 10546;10547 25215;25216;25217;25218;25219;25220 17801;17802 17802 830 2 105840 49106 MLGEALSKNPGYIK RQKIVQAEGEAEAAKMLGEALSKNPGYIKL KMLGEALSKNPGYIKLRKIRAAQNISKTIA K M L I K L 1 0 1 0 0 0 1 2 0 1 2 2 1 0 1 1 0 0 1 0 0 0 14 1 1519.8068 Q99623 Q99623 237 250 PHB2 Prohibitin-2 yes yes 2;3 8.0126E-06 183.99 By MS/MS 8 0 2 2 14907000 14907000 0 10136 2277 10548 25221;25222 17803;17804 17803 1430 2 983400 0 MLGETCADCGTILLQDK RISRLMGDYLLRGYRMLGETCADCGTILLQ GETCADCGTILLQDKQRKIYCVACQELDSD R M L D K Q 1 0 0 2 2 1 1 2 0 1 3 1 1 0 0 0 2 0 0 0 0 0 17 0 1923.874 O60232 O60232 48 64 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 3.335E-98 333.32 By MS/MS 9 0 1 1 1692200 1692200 0 10137 238 10549 25223 17805 17805 139 1 971160 0 MLGYFSLVGLLR PESVAGEYGRHSLYKMLGYFSLVGLLRLHS LYKMLGYFSLVGLLRLHSLLGDYYQAIKVL K M L L R L 0 1 0 0 0 0 0 2 0 0 4 0 1 1 0 1 0 0 1 1 0 0 12 0 1367.7635 Q9Y262 Q9Y262 268 279 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 6.1711E-11 195.79 By MS/MS 6 0 1 1 580420 580420 0 10138 2868 10550 25224 17806 17806 1659 1 4526.2 0 MLIQQFR HISPYKDLLDPARWRMLIQQFRYDNYRLHQ LLDPARWRMLIQQFRYDNYRLHQLGNNSVF R M L F R Y 0 1 0 0 0 2 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 7 0 934.50586 Q7L5Y9 Q7L5Y9 265 271 MAEA Macrophage erythroblast attacher yes yes 2 0.016303 119.22 By MS/MS 7 0 1 1 1919800 1919800 0 10139 1769 10551 25225 17807 17807 1255 1 34306 0 MLIYDPAK HVKNLDENGLDLLSKMLIYDPAKRISGKMA GLDLLSKMLIYDPAKRISGKMALNHPYFND K M L A K R 1 0 0 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 1 0 0 0 8 0 949.49429 P06493 P06493 267 274 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.038392 88.942 By MS/MS 8 0 1 1 684780 684780 0 10140 477 10552 25226 17808 17808 265 1 45175 0 MLLCEAVAAVMAK KDRQTGKILKVNMWRMLLCEAVAAVMAKGF WRMLLCEAVAAVMAKGFDILGIKPVQRM__ R M L A K G 4 0 0 0 1 0 1 0 0 0 2 1 2 0 0 0 0 0 0 2 0 0 13 0 1405.7131 P54136 P54136 635 647 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 2.8907E-08 185.33 By MS/MS 5 0 2 2 1031900 1031900 0 10141 1013 10553;10554 25227;25228 17809;17810 17809 785;786 2 42414 0 MLLDPMGGIVMTNDGNAILR ADIIRTCLGPKSMMKMLLDPMGGIVMTNDG MGGIVMTNDGNAILREIQVQHPAAKSMIEI K M L L R E 1 1 2 2 0 0 0 3 0 2 3 0 3 0 1 0 1 0 0 1 0 0 20 0 2130.0636 P49368 P49368 49 68 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 1.0953E-31 215.48 By MS/MS 6 0.707 2 4 2 8 10320000 10320000 0 10142 916 10555;10556;10557 25229;25230;25231;25232;25233;25234;25235;25236 17811;17812;17813;17814;17815 17814 674;675;676 5 118010 0 MLLDSEQHPCQLK LAIQLGAQALLGAAKMLLDSEQHPCQLKDN AKMLLDSEQHPCQLKDNVCSPGGATIHALH K M L L K D 0 0 0 1 1 2 1 0 1 0 3 1 1 0 1 1 0 0 0 0 0 0 13 0 1597.7592 Q96C36 Q96C36 216 228 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2;3 2.5569E-06 175.49 By MS/MS 8 0 2 2 15573000 15573000 0 10143 2136 10558 25237;25238 17816;17817 17817 1390 2 1027300 0 MLLDSVLTTHER TKTIEVLQLQDQGSKMLLDSVLTTHERVVQ GSKMLLDSVLTTHERVVQISGLSATFAEIF K M L E R V 0 1 0 1 0 0 1 0 1 0 3 0 1 0 0 1 2 0 0 1 0 0 12 0 1413.7286 Q96GC5 Q96GC5 144 155 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2;3 2.6245E-11 206.49 By MS/MS 9 0 2 2 2780100 2780100 0 10144 2179 10559 25239;25240 17818;17819 17819 1398 2 1595500 0 MLLFVEQVASK ______________________________ ______________________________ - M L S K G 1 0 0 0 0 1 1 0 0 0 2 1 1 1 0 1 0 0 0 2 0 0 11 0 1263.6897 Q71RC2 Q71RC2 1 11 LARP4 La-related protein 4 yes yes 2 0.015795 80.916 By MS/MS 4 0 1 1 137820 137820 0 10145 1752 10560 25241 17820 17820 1237 0 3762.2 0 MLLHEGQHPAQLR LAHRIAAQTLLGTAKMLLHEGQHPAQLRSD AKMLLHEGQHPAQLRSDVCTPGGTTIYGLH K M L L R S 1 1 0 0 0 2 1 1 2 0 3 0 1 0 1 0 0 0 0 0 0 0 13 0 1528.7933 Q53H96 Q53H96 219 231 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 3 0.030422 73.082 By MS/MS 8 0 1 1 646150 646150 0 10146 1588 10561 25242 17821 17821 1191 1 42626 0 MLLHSEQHPGQLK LAVRLGAQALLGAAKMLLHSEQHPGQLKDN AKMLLHSEQHPGQLKDNVSSPGGATIHALH K M L L K D 0 0 0 0 0 2 1 1 2 0 3 1 1 0 1 1 0 0 0 0 0 0 13 0 1516.782 P32322 P32322 216 228 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2;3;4 0.0029025 107.55 By MS/MS 8 0 3 3 11256000 11256000 0 10147 764 10562 25243;25244;25245 17822;17823;17824 17824 519 3 742540 0 MLLNLSENPAVAK LLTTANARTKFHVLKMLLNLSENPAVAKKL LKMLLNLSENPAVAKKLFSAKALSIFVGLF K M L A K K 2 0 2 0 0 0 1 0 0 0 3 1 1 0 1 1 0 0 0 1 0 0 13 0 1398.7541 Q96D09 Q96D09 741 753 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 1.595E-18 230.95 By MS/MS 4 0 1 1 944700 944700 0 10148 2146 10563 25246 17825 17825 1393 1 25789 0 MLLPNILLTGTPGVGK ______________________________ LLPNILLTGTPGVGKTTLGKELASKSGLKY - M L G K T 0 0 1 0 0 0 0 3 0 1 4 1 1 0 2 0 2 0 0 1 0 0 16 0 1622.9429 Q9Y3D8 Q9Y3D8 1 16 AK6 Adenylate kinase isoenzyme 6 yes yes 2 0.00088898 117.79 By MS/MS 9 0 1 1 61583 61583 0 10149 2934 10564 25247 17826;17827 17827 1688 2 35343 0 MLLVDELR NDRERIQEVADELQKMLLVDELRDAVLLLF VADELQKMLLVDELRDAVLLLFANKQDLPN K M L L R D 0 1 0 1 0 0 1 0 0 0 3 0 1 0 0 0 0 0 0 1 0 0 8 0 987.5423 P18085 P18085 110 117 ARF4 ADP-ribosylation factor 4 yes yes 2 0.0070538 119.29 By MS/MS 9.5 0.5 1 1 2 2221500 2221500 0 10150 621 10565 25248;25249 17828;17829 17828 414 2 1687900 0 MLNGLEDSIGLSK LAMKGDVENIEVVQKMLNGLEDSIGLSKMV QKMLNGLEDSIGLSKMVFINNIALAQIKNN K M L S K M 0 0 1 1 0 0 1 2 0 1 3 1 1 0 0 2 0 0 0 0 0 0 13 0 1375.7017 P42704 P42704 1164 1176 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.2274E-17 243.4 By MS/MS 3.38 1.32 1 1 2 2 2 8 45020000 45020000 0 10151 854 10566;10567 25250;25251;25252;25253;25254;25255;25256;25257 17830;17831;17832;17833;17834;17835;17836 17832 612 6 1198200 0 MLPPEELVPYYTDAK KPVPFFLRGQPIPKRMLPPEELVPYYTDAK MLPPEELVPYYTDAKNRGYLADPAKFPEAR R M L A K N 1 0 0 1 0 0 2 0 0 0 2 1 1 0 3 0 1 0 2 1 0 0 15 0 1764.8644 Q9P015 Q9P015 204 218 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.035057 66.023 By MS/MS 8 0 1 1 943950 943950 0 10152 2721 10568 25258 17837 17837 1585 1 62272 0 MLPTFVR KNGLSRDFNPTATVKMLPTFVRSIPDGSEK FNPTATVKMLPTFVRSIPDGSEKGDFIALD K M L V R S 0 1 0 0 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 0 0 7 0 862.47349 P19367;Q2TB90;P52789;P52790 P19367 63 69 HK1;HKDC1;HK2;HK3 Hexokinase-1;Putative hexokinase HKDC1;Hexokinase-2;Hexokinase-3 no no 2 0.04273 97.602 By MS/MS 4.5 0.5 1 1 2 2445100 2445100 0 10153 630;992 10569 25259;25260 17838 17838 1 67957 0 MLPTIIADNAGYDSADLVAQLR GKEAVAMESYAKALRMLPTIIADNAGYDSA DNAGYDSADLVAQLRAAHSEGNTTAGLDMR R M L L R A 4 1 1 3 0 1 0 1 0 2 3 0 1 0 1 1 1 0 1 1 0 0 22 0 2346.1889 P78371 P78371 445 466 CCT2 T-complex protein 1 subunit beta yes yes 2;3 1.1903E-25 246.03 By MS/MS 6 0 6 6 31025000 31025000 0 10154 1195 10570;10571 25261;25262;25263;25264;25265;25266 17839;17840;17841;17842;17843;17844;17845 17843 948 7 241940 0 MLQDTVLAAGCK SLPPGHTLFSGISDRMLQDTVLAAGCKQIL SDRMLQDTVLAAGCKQILVPFPPQTAASPD R M L C K Q 2 0 0 1 1 1 0 1 0 0 2 1 1 0 0 0 1 0 0 1 0 0 12 0 1305.6421 Q9NVU0 Q9NVU0 606 617 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 3.8487E-05 164.64 By MS/MS 5 0 1 1 619500 619500 0 10155 2661 10572 25267 17846 17846 1570 1 25464 0 MLQLIQSR PTVFDLSPQQKEWQRMLQLIQSRLQEEHSL QQKEWQRMLQLIQSRLQEEHSLQDVIFKSA R M L S R L 0 1 0 0 0 2 0 0 0 1 2 0 1 0 0 1 0 0 0 0 0 0 8 0 987.55354 Q96RQ1 Q96RQ1 126 133 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 yes yes 2 0.014315 105.57 By MS/MS 7 0 1 1 1604900 1604900 0 10156 2248 10573 25268 17847 17847 1419 1 28680 0 MLQPCGPPADKPEEN ENESKARVRFNLMEKMLQPCGPPADKPEEN MLQPCGPPADKPEEN_______________ K M L E N - 1 0 1 1 1 1 2 1 0 0 1 1 1 0 4 0 0 0 0 0 0 0 15 1 1681.744 Q9BWJ5 Q9BWJ5 72 86 SF3B5 Splicing factor 3B subunit 5 yes yes 2 0.0022412 141.58 By MS/MS 10 0 1 1 444150 444150 0 10157 2395 10574 25269 17848 17848 1479 1 472080 0 MLQQVPENINFPAEEEK ______________________________ QQVPENINFPAEEEKILEFWTEFNCFQECL - M L E K I 1 0 2 0 0 2 4 0 0 1 1 1 1 1 2 0 0 0 0 1 0 0 17 0 2014.967 P41252 P41252 1 17 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 6.1583E-11 163.27 By MS/MS 3 0 2 2 2145000 2145000 0 10158 840 10575;10576 25270;25271 17849;17850 17849 595 2 55996 0 MLSLDFLDDVR ______________________________ ______________________________ - M L V R R 0 1 0 3 0 0 0 0 0 0 3 0 1 1 0 1 0 0 0 1 0 0 11 0 1322.654 P67812 P67812 1 11 SEC11A Signal peptidase complex catalytic subunit SEC11A yes yes 2 0.0015478 119.22 By MS/MS 9 0 1 1 100000 100000 0 10159 1183 10577 25272 17851 17851 921 1 57393 0 MLSLLVVDVGNPEEVR AWMECCCVSSGISERMLSLLVVDVGNPEEV LSLLVVDVGNPEEVRLFSKGFLVALVQVMP R M L V R L 0 1 1 1 0 0 2 1 0 0 3 0 1 0 1 1 0 0 0 4 0 0 16 0 1768.9393 P57678 P57678 832 847 GEMIN4 Gem-associated protein 4 yes yes 2 2.3048E-10 184.11 By MS/MS 4 0 1 1 309060 309060 0 10160 1054 10578 25273 17852 17852 818 1 8437.1 0 MLSSGVCTSTVQLPGK LLPFLLYMAAPQIRKMLSSGVCTSTVQLPG LSSGVCTSTVQLPGKVVVVTGANTGIGKET K M L G K V 0 0 0 0 1 1 0 2 0 0 2 1 1 0 1 3 2 0 0 2 0 0 16 0 1663.8273 Q8TC12 Q8TC12 27 42 RDH11 Retinol dehydrogenase 11 yes yes 2 3.4642E-10 178.32 By MS/MS 8 0 1 1 3657000 3657000 0 10161 1992 10579 25274 17853 17853 1309 1 241250 0 MLTEAIMHDCVVK SLGNIKFIGELFKLKMLTEAIMHDCVVKLL LKMLTEAIMHDCVVKLLKNHDEESLECLCR K M L V K L 1 0 0 1 1 0 1 0 1 1 1 1 2 0 0 0 1 0 0 2 0 0 13 0 1545.7353 Q04637;O43432 Q04637 910 922 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2;3 1.1792E-05 170.52 By MS/MS 2.17 0.687 1 3 2 6 2806800 2806800 0 10162 1264;200 10580;10581 25275;25276;25277;25278;25279;25280 17854;17855;17856;17857 17856 117;118 4 125780 0 MLTFLMLVR LNHVEDGLKDHYDIKMLTFLMLVRLSTLCP DHYDIKMLTFLMLVRLSTLCPSAVLQRLDR K M L V R L 0 1 0 0 0 0 0 0 0 0 3 0 2 1 0 0 1 0 0 1 0 0 9 0 1122.6293 Q86VP6 Q86VP6 1121 1129 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00042978 152.47 By MS/MS 3.5 0.5 1 1 2 117260 117260 0 10163 1829 10582 25281;25282 17858;17859 17859 1272;1273 2 3201.1 0 MLTGPVYSQSTALTHK VVTGTNNLGYMDLLRMLTGPVYSQSTALTH LTGPVYSQSTALTHKQSYYSIAKCVAALTR R M L H K Q 1 0 0 0 0 1 0 1 1 0 2 1 1 0 1 2 3 0 1 1 0 0 16 0 1732.8818 Q86VP6 Q86VP6 778 793 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 3 0.029596 66.826 By MS/MS 4 0.816 1 1 1 3 2044200 2044200 0 10164 1829 10583 25283;25284;25285 17860;17861 17860 1274 2 58275 0 MLVDDIGDVTITNDGATILK ANIVKSSLGPVGLDKMLVDDIGDVTITNDG IGDVTITNDGATILKLLEVEHPAAKVLCEL K M L L K L 1 0 1 4 0 0 0 2 0 3 2 1 1 0 0 0 3 0 0 2 0 0 20 0 2103.0769 P17987 P17987 44 63 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 1.0264E-50 267.5 By MS/MS 5.31 2.7 1 2 1 1 1 3 1 1 1 1 13 59978000 59978000 0 10165 619 10584;10585 25286;25287;25288;25289;25290;25291;25292;25293;25294;25295;25296;25297;25298 17862;17863;17864;17865;17866;17867;17868;17869 17869 409 7 898520 0 MLVELSK ATILKQMQVLHPAARMLVELSKAQDIEAGD QVLHPAARMLVELSKAQDIEAGDGTTSVVI R M L S K A 0 0 0 0 0 0 1 0 0 0 2 1 1 0 0 1 0 0 0 1 0 0 7 0 818.45718 P50991 P50991 90 96 CCT4 T-complex protein 1 subunit delta yes yes 2 0.021773 113.7 By MS/MS 9 0 1 1 5315700 5315700 0 10166 956 10586 25299 17870 17870 717 1 3050700 0 MLVENLYR SFHGWSGTGKNFVARMLVENLYRDGLMSDC GKNFVARMLVENLYRDGLMSDCVRMFIATF R M L Y R D 0 1 1 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 1 1 0 0 8 0 1036.5376 Q9H497 Q9H497 179 186 TOR3A Torsin-3A yes yes 2 0.0086626 116.25 By MS/MS 7 0 1 1 885330 885330 0 10167 2496 10587 25300 17871 17871 1522 1 15821 0 MLVETAQER VYDLVAVLCPKGPLRMLVETAQERNETLFP PKGPLRMLVETAQERNETLFPALIYSSTMV R M L E R N 1 1 0 0 0 1 2 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1075.5332 P49768;P49810 P49768 270 278 PSEN1;PSEN2 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin-2;Presenilin-2 NTF subunit;Presenilin-2 CTF subunit yes no 2 0.0008397 145.72 By MS/MS 1 0 1 1 141940 141940 0 10168 931 10588 25301 17872 17872 1 6934.9 0 MLVIEQCK AGLVQEISFGTTKDKMLVIEQCKNSRAVTI FGTTKDKMLVIEQCKNSRAVTIFIRGGNKM K M L C K N 0 0 0 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 1019.5144 P48643 P48643 371 378 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.0012652 159.2 By MS/MS 6 0 2 2 91413000 91413000 0 10169 909 10589;10590 25302;25303 17873;17874 17873 649 2 712840 0 MLVSGAGDIK QDVLRTNLGPKGTMKMLVSGAGDIKLTKDG KGTMKMLVSGAGDIKLTKDGNVLLHEMQIQ K M L I K L 1 0 0 1 0 0 0 2 0 1 1 1 1 0 0 1 0 0 0 1 0 0 10 0 989.52157 P40227;Q92526 P40227 46 55 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 7.2414E-07 186.41 By MS/MS 6.45 1.88 2 2 2 2 1 1 1 11 122100000 122100000 0 10170 828 10591;10592 25304;25305;25306;25307;25308;25309;25310;25311;25312;25313;25314 17875;17876;17877;17878;17879;17880 17880 575 6 1999400 0 MLVSGQGPVMENAQGLGFR SHSPMKLFSEYHEKRMLVSGQGPVMENAQG GQGPVMENAQGLGFRNVVTVDELRMAFPLL R M L F R N 1 1 1 0 0 2 1 4 0 0 2 0 2 1 1 1 0 0 0 2 0 0 19 0 1989.9765 Q9BXW7 Q9BXW7 134 152 CECR5 Cat eye syndrome critical region protein 5 yes yes 2;3 7.7122E-27 228.11 By MS/MS 7.25 0.433 3 1 4 19497000 19497000 0 10171 2404 10593;10594 25315;25316;25317;25318 17881;17882;17883;17884 17881 1485;1486 4 369530 0 MLVTFDEELRPLPVSVR SHYVLYGLVAAMQPRMLVTFDEELRPLPVS VTFDEELRPLPVSVRVGQAVDVVGQAGKPK R M L V R V 0 2 0 1 0 0 2 0 0 0 3 0 1 1 2 1 1 0 0 3 0 0 17 1 2000.0765 Q13200 Q13200 829 845 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 3 0.0045407 91.207 By MS/MS 4 0 1 1 1343500 1343500 0 10172 1347 10595 25319 17885 17885 1056 1 36675 0 MLVVAEQPLHAMR PQNVYEYVRKYAEHRMLVVAEQPLHAMRKG HRMLVVAEQPLHAMRKGLLDVLPKNSLEDL R M L M R K 2 1 0 0 0 1 1 0 1 0 2 0 2 0 1 0 0 0 0 2 0 0 13 0 1493.7847 O95071 O95071 2643 2655 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 0.044083 54.471 By MS/MS 1.5 0.5 1 1 2 572130 572130 0 10173 364 10596 25320;25321 17886 17886 1 28093 0 MLYVWALCR PKGEVVEGDPDKVLRMLYVWALCRDQDELN PDKVLRMLYVWALCRDQDELNPYAAWRLLD R M L C R D 1 1 0 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 1 1 0 0 9 0 1210.5991 O43615 O43615 419 427 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00039824 151.51 By MS/MS 7 0 1 1 795980 795980 0 10174 209 10597 25322 17887 17887 126 1 14224 0 MMDYLQGSGETPQTDVR VDISSNTAGKTLFGKMMDYLQGSGETPQTD DYLQGSGETPQTDVRWMSETGIIDVFLLLG K M M V R W 0 1 0 2 0 2 1 2 0 0 1 0 2 0 1 1 2 0 1 1 0 0 17 0 1926.8452 Q14697 Q14697 338 354 GANAB Neutral alpha-glucosidase AB yes yes 2 3.8368E-98 331.39 By MS/MS 4 0 2 2 1488100 1488100 0 10175 1443 10598;10599 25323;25324 17888;17889 17888 1133;1134 2 40623 0 MMEDAEAPGEQLYQQSR VFTILAPEDPPVPFRMMEDAEAPGEQLYQQ EDAEAPGEQLYQQSRAYVAANQRLQQAGNV R M M S R A 2 1 0 1 0 3 3 1 0 0 1 0 2 0 1 1 0 0 1 0 0 0 17 0 1981.851 Q9UFG5 Q9UFG5 51 67 C19orf25 UPF0449 protein C19orf25 yes yes 2 1.6753E-07 150.26 By MS/MS 10 0 1 1 187250 187250 0 10176 2767 10600 25325 17890 17890 1614;1615 1 199030 0 MMGHRPVLVLSQNTK ______________________________ MMGHRPVLVLSQNTKRESGRKVQSGNINAA - M M T K R 0 1 1 0 0 1 0 1 1 0 2 1 2 0 1 1 1 0 0 2 0 0 15 1 1709.9069 P49368 P49368 1 15 CCT3 T-complex protein 1 subunit gamma yes yes 3 0.00082817 104.9 By MS/MS 6.5 1.12 1 1 1 1 4 30756000 30756000 0 10177 916 10601 25326;25327;25328;25329 17891;17892;17893 17891 677;678 3 431000 0 MMGLEVLGEK IRTFVPKNERLHYLRMMGLEVLGEKKKEGV LHYLRMMGLEVLGEKKKEGVILTNESAAST R M M E K K 0 0 0 0 0 0 2 2 0 0 2 1 2 0 0 0 0 0 0 1 0 0 10 0 1105.5512 Q08J23 Q08J23 701 710 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.0056178 110.87 By MS/MS 4 0 1 1 0 0 0 10178 1295 10602 25330 17894 17894 1 0 0 MMLGTEGGEGFVVK ______________________________ ______________________________ - M M V K V 0 0 0 0 0 0 2 4 0 0 1 1 2 1 0 0 1 0 0 2 0 0 14 0 1453.6945 P31943 P31943 1 14 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 2 2.8E-08 180.88 By MS/MS 6 0 1 1 736140 736140 0 10179 758 10603 25331 17895 17895 1 5740.5 0 MMMQSGR VAGLTSYPFDTVRRRMMMQSGRKGTDIMYT PFDTVRRRMMMQSGRKGTDIMYTGTLDCWR R M M G R K 0 1 0 0 0 1 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 0 7 0 839.3452 P05141;P12235;P12236 P05141 238 244 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 0.0075777 113.89 By MS/MS 2.22 2.1 4 4 1 9 2612900 2612900 0 10180 469;563;562 10604;10605 25332;25333;25334;25335;25336;25337;25338;25339;25340 17896;17897;17898;17899;17900;17901;17902;17903 17898 257;258;259 8 129520 0 MMPTPVILLK ______________________________ ______________________________ - M M L K E 0 0 0 0 0 0 0 0 0 1 2 1 2 0 2 0 1 0 0 1 0 0 10 0 1141.6603 Q99832 Q99832 1 10 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00027735 124.98 By MS/MS By MS/MS 5.9 2.12 1 1 1 4 6 3 2 1 1 19 1 33270000 33049000 221090 10181 2295 10606;10607;10608 25341;25342;25343;25344;25345;25346;25347;25348;25349;25350;25351;25352;25353;25354;25355;25356;25357;25358;25359;25360 17904;17905;17906;17907;17908;17909;17910;17911;17912;17913;17914;17915;17916 17914 1441;1442 12 1381600 678070 MMVGVNISDEQLGSIADR KDEKISRDELLQVLRMMVGVNISDEQLGSI GVNISDEQLGSIADRTIQEADQDGDSAISF R M M D R T 1 1 1 2 0 1 1 2 0 2 1 0 2 0 0 2 0 0 0 2 0 0 18 0 1933.9237 Q99653 Q99653 141 158 CHP1 Calcineurin B homologous protein 1 yes yes 2 2.8706E-56 283.66 By MS/MS 9 0 1 1 880190 880190 0 10182 2281 10609 25361 17917 17917 1432;1433 1 505150 0 MNAFSGVMMLQLLEK EDNGIGILTLNNPSRMNAFSGVMMLQLLEK MNAFSGVMMLQLLEKVIELENWTEGKGLIV R M N E K V 1 0 1 0 0 1 1 1 0 0 3 1 3 1 0 1 0 0 0 1 0 0 15 0 1710.8507 Q9NTX5 Q9NTX5 75 89 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 3.1313E-08 172.58 By MS/MS 8 0 1 1 322560 322560 0 10183 2633 10610 25362 17918 17918 1555;1556;1557 1 21279 0 MNALNEVNK KMILRLLQISSFNGKMNALNEVNKVISSVS SSFNGKMNALNEVNKVISSVSYYTHRHGNP K M N N K V 1 0 3 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 9 0 1031.507 Q93008 Q93008 352 360 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 2.7214E-06 181.41 By MS/MS 2 0.707 1 2 1 4 1803400 1803400 0 10184 2096 10611;10612 25363;25364;25365;25366 17919;17920 17919 1372 2 83996 0 MNDIVKEFEDR DVSLIERGESFYQDRMNDIVKEFEDRGFVQ YQDRMNDIVKEFEDRGFVQVDDGRKIVFVP R M N D R G 0 1 1 2 0 0 2 0 0 1 0 1 1 1 0 0 0 0 0 1 0 0 11 1 1394.65 P54136 P54136 342 352 RARS Arginine--tRNA ligase, cytoplasmic yes yes 3 0.0083765 115.33 By MS/MS 5 0 1 1 996120 996120 0 10185 1013 10613 25367 17921 17921 1 40944 0 MNDTVTIR ______________________________ ______________________________ - M N I R T 0 1 1 1 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 1 0 0 8 0 948.46987 P62847 P62847 1 8 RPS24 40S ribosomal protein S24 yes yes 2 0.0025357 123.21 By MS/MS 9.5 0.5 1 1 2 1232400 1232400 0 10186 1149 10614 25368;25369 17922;17923 17922 899 2 906100 0 MNEAFGDTK DVQSIIGLQRFFETRMNEAFGDTKFSAVLV RFFETRMNEAFGDTKFSAVLVEPPPMSLPG R M N T K F 1 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 9 0 1011.4331 Q13263 Q13263 796 804 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0014813 128.03 By MS/MS 4 0 1 1 897910 897910 0 10187 1351 10615 25370 17924 17924 1061 1 24512 0 MNEFLENFEK GIFYEFRSYYLKPSKMNEFLENFEKNAHLR LKPSKMNEFLENFEKNAHLRTAHSELVGYW K M N E K N 0 0 2 0 0 0 3 0 0 0 1 1 1 2 0 0 0 0 0 0 0 0 10 0 1299.5805 Q9UFN0 Q9UFN0 49 58 NIPSNAP3A Protein NipSnap homolog 3A yes yes 2 0.00011875 157.75 By MS/MS 8 0 1 1 440440 440440 0 10188 2768 10616 25371 17925 17925 1616 1 29056 0 MNIMDFNVKK ______________________________ ______________________________ - M N K K L 0 0 2 1 0 0 0 0 0 1 0 2 2 1 0 0 0 0 0 1 0 0 10 1 1238.6151 Q9Y371 Q9Y371 1 10 SH3GLB1 Endophilin-B1 yes yes 2 0.039039 63.534 By MS/MS 7 0 2 2 0 0 0 10189 2914 10617 25372;25373 17926;17927 17926 1678;1679 2 0 0 MNLFNLDR ______________________________ ______________________________ - M N D R F 0 1 2 1 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 8 0 1021.5015 Q9H4L7 Q9H4L7 1 8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 0.0031753 118.5 By MS/MS 3 0 1 1 255340 255340 0 10190 2502 10618 25374 17928 17928 1523 1 6665.8 0 MNLLPNIESPVTR ______________________________ ______________________________ - M N T R Q 0 1 2 0 0 0 1 0 0 1 2 0 1 0 2 1 1 0 0 1 0 0 13 0 1482.7864 P17980 P17980 1 13 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.001535 108.35 By MS/MS 8 2 1 1 2 405570 405570 0 10191 618 10619;10620 25375;25376 17929;17930 17929 404 2 76980 0 MNLPGEVTFLPLNK DSDEVSTKILMEFNKMNLPGEVTFLPLNKL KMNLPGEVTFLPLNKLDVRDTAYPETNDAI K M N N K L 0 0 2 0 0 0 1 1 0 0 3 1 1 1 2 0 1 0 0 1 0 0 14 0 1571.8381 Q9UQE7 Q9UQE7 579 592 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 4.4231E-07 176.32 By MS/MS 4 0.816 1 1 1 3 1285300 1285300 0 10192 2860 10621 25377;25378;25379 17931 17931 1646 1 34490 0 MNLSAIQDR RDLPNALDEKQLIEKMNLSAIQDREICCYS KQLIEKMNLSAIQDREICCYSISCKEKDNI K M N D R E 1 1 1 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 9 0 1046.5179 Q96BM9;Q9NVJ2 Q9NVJ2 147 155 ARL8A;ARL8B ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B no no 2 0.021655 90.15 By MS/MS 9 0 1 1 595600 595600 0 10193 2128;2656 10622 25380 17932 17932 1384 1 341820 0 MNLSDVELIPLPLEPQVK KKNERLQALLGDNEKMNLSDVELIPLPLEP SDVELIPLPLEPQVKIRGIIPETATLFKSA K M N V K I 0 0 1 1 0 1 2 0 0 1 4 1 1 0 3 1 0 0 0 2 0 0 18 0 2034.1071 Q8NEB9 Q8NEB9 583 600 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 2 0.048836 59.185 By MS/MS 4 0 1 1 134900 134900 0 10194 1964 10623 25381 17933 17933 1 3682.6 0 MNPEKDFAPLTPNIVR ______________________________ NPEKDFAPLTPNIVRALNDKLYEKRKVAAL - M N V R A 1 1 2 1 0 0 1 0 0 1 1 1 1 1 3 0 1 0 0 1 0 0 16 1 1840.9506 Q08AM6 Q08AM6 1 16 VAC14 Protein VAC14 homolog yes yes 2 0.0041292 93.228 By MS/MS 6.33 2.62 1 1 1 3 1524400 1524400 0 10195 1294 10624 25382;25383;25384 17934;17935 17934 1039 2 204080 0 MNPEYDYLFK ______________________________ ______________________________ - M N F K L 0 0 1 1 0 0 1 0 0 0 1 1 1 1 1 0 0 0 2 0 0 0 10 0 1318.5904 Q9H0U4 Q9H0U4 1 10 RAB1B Ras-related protein Rab-1B yes yes 2 0.00026901 126.31 By MS/MS 9 0 1 1 575140 575140 0 10196 2459 10625 25385 17936 17936 1504 1 330080 0 MNQVEDEVFEEFCR IIQSREREMKDLKEKMNQVEDEVFEEFCRE KMNQVEDEVFEEFCREIGVRNIREFEEEKV K M N C R E 0 1 1 1 1 1 4 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 14 0 1830.7553 Q14683 Q14683 769 782 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.01347 97.631 By MS/MS 3 0 1 1 185700 185700 0 10197 1440 10626 25386 17937 17937 1132 0 4847.6 0 MNRPAPVEISYENMR ______________________________ MNRPAPVEISYENMRFLITHNPTNATLNKF - M N M R F 1 2 2 0 0 0 2 0 0 1 0 0 2 0 2 1 0 0 1 1 0 0 15 1 1805.8553 Q12974 Q12974 1 15 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 2 0.018993 57.802 By MS/MS 10 0 1 1 262100 262100 0 10198 1320 10627 25387 17938 17938 1045;1046 1 278590 0 MNSSCADILLFASYK ETVQKETIHPRKSYKMNSSCADILLFASYK MNSSCADILLFASYKWNVSRPSLLADSKDV K M N Y K W 2 0 1 1 1 0 0 0 0 1 2 1 1 1 0 3 0 0 1 0 0 0 15 0 1718.8008 Q6P2Q9 Q6P2Q9 1622 1636 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0099345 85.554 By MS/MS 2 0 1 1 80881 80881 0 10199 1706 10628 25388 17939 17939 1224 1 4020.2 0 MNVDKVIPVEK EYIHNFKLLQASFKRMNVDKVIPVEKLVKG SFKRMNVDKVIPVEKLVKGRFQDNLDFIQW R M N E K L 0 0 1 1 0 0 1 0 0 1 0 2 1 0 1 0 0 0 0 3 0 0 11 1 1270.6955 Q15555 Q15555 128 138 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.023609 156.01 By MS/MS 7 0.816 1 1 1 3 3865400 3865400 0 10200 1508 10629 25389;25390;25391 17940 17940 1162 1 80676 0 MNVFDTELK VGEATETALTCLVEKMNVFDTELKGLSKIE TCLVEKMNVFDTELKGLSKIERANACNSVI K M N L K G 0 0 1 1 0 0 1 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 9 0 1095.527 P16615 P16615 452 460 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 1.2757E-05 175.91 By MS/MS 3 1.41 2 2 2 2 2 10 8249400 8249400 0 10201 608 10630;10631 25392;25393;25394;25395;25396;25397;25398;25399;25400;25401 17941;17942;17943;17944;17945;17946 17941 395 6 308290 0 MNVFDTELKGLSK VGEATETALTCLVEKMNVFDTELKGLSKIE EKMNVFDTELKGLSKIERANACNSVIKQLM K M N S K I 0 0 1 1 0 0 1 1 0 0 2 2 1 1 0 1 1 0 0 1 0 0 13 1 1480.7596 P16615 P16615 452 464 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 0.0010532 170.4 By MS/MS 2.29 1.03 2 2 2 1 7 2064900 2064900 0 10202 608 10632 25402;25403;25404;25405;25406;25407;25408 17947;17948;17949;17950 17947 395 4 77011 0 MNVGTAHSEVNPNTR ______________________________ MNVGTAHSEVNPNTRVMNSRGIWLSYVLAI - M N T R V 1 1 3 0 0 0 1 1 1 0 0 0 1 0 1 1 2 0 0 2 0 0 15 0 1625.758 Q8N138 Q8N138 1 15 ORMDL3 ORM1-like protein 3 yes yes 2 1.3284E-07 161.87 By MS/MS By matching 10 0 3 2 1 914310 885020 29288 10203 1893 10633;10634 25409;25410;25411 17951;17952 17951 1289 2 940690 751210 MNVGVAHSEVNPNTR ______________________________ MNVGVAHSEVNPNTRVMNSRGMWLTYALGV - M N T R V 1 1 3 0 0 0 1 1 1 0 0 0 1 0 1 1 1 0 0 3 0 0 15 0 1623.7787 Q9P0S3;Q53FV1 Q9P0S3 1 15 ORMDL1;ORMDL2 ORM1-like protein 1;ORM1-like protein 2 yes no 2 4.0352E-06 154.23 By MS/MS 9.67 0.471 1 2 3 3107700 3107700 0 10204 1583 10635;10636 25412;25413;25414 17953;17954 17953 1183 2 3242700 0 MNVLADALK ______________________________ ______________________________ R M N L K S 2 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 0 973.52665 P62244 P62244 4 12 RPS15A 40S ribosomal protein S15a yes yes 2 0.00074953 139.98 By MS/MS 9.5 0.5 1 1 2 3541400 3541400 0 10205 1119 10637 25415;25416 17955 17955 873 1 3724800 0 MPACNIMLLGAQR AKIMGVAGGLTNLSKMPACNIMLLGAQRKT SKMPACNIMLLGAQRKTLSGFSSTSVLPHT K M P Q R K 2 1 1 0 1 1 0 1 0 1 2 0 2 0 1 0 0 0 0 0 0 0 13 0 1473.7254 Q8WWY3 Q8WWY3 244 256 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 0.046308 48.602 By MS/MS 6 0 1 1 29022 0 29022 10206 2043 10638 25417 17956 17956 1 0 89009 MPESVNVLQIVK VSVSVNGDVRIFDPRMPESVNVLQIVKGLT DPRMPESVNVLQIVKGLTALDIHPQADLIA R M P V K G 0 0 1 0 0 1 1 0 0 1 1 1 1 0 1 1 0 0 0 3 0 0 12 0 1355.7483 Q8N122 Q8N122 1243 1254 RPTOR Regulatory-associated protein of mTOR yes yes 2 3.4165E-08 194.12 By MS/MS 3 0 1 1 602100 602100 0 10207 1891 10639 25418 17957 17957 1287 1 15718 0 MPGELVLENR LLASNFPPLPGSSSRMPGELVLENRMSDVV GSSSRMPGELVLENRMSDVVKGVYKEKDNE R M P N R M 0 1 1 0 0 0 2 1 0 0 2 0 1 0 1 0 0 0 0 1 0 0 10 0 1156.591 Q71RC2 Q71RC2 494 503 LARP4 La-related protein 4 yes yes 2 0.019055 86.898 By MS/MS 4 0 1 1 1427000 1427000 0 10208 1752 10640 25419 17958 17958 1238 1 38955 0 MPITADLVAPILR QDKLRRHHVPQQCNKMPITADLVAPILRFL NKMPITADLVAPILRFLTEVGNSHIMKDWL K M P L R F 2 1 0 1 0 0 0 0 0 2 2 0 1 0 2 0 1 0 0 1 0 0 13 0 1408.8112 Q9NR09 Q9NR09 3676 3688 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.0021024 113.93 By MS/MS 2 0.816 1 1 1 3 279250 279250 0 10209 2596 10641 25420;25421;25422 17959;17960;17961;17962 17959 1545 4 11671 0 MPTGEIEIK SGTVISRPAGQENPKMPTGEIEIKVKTAEL GQENPKMPTGEIEIKVKTAELLNACKKLPF K M P I K V 0 0 0 0 0 0 2 1 0 2 0 1 1 0 1 0 1 0 0 0 0 0 9 0 1016.5212 Q6PI48 Q6PI48 134 142 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.01673 98.582 By MS/MS 5 0 2 2 2056000 2056000 0 10210 1715 10642;10643 25423;25424 17963;17964 17964 1228 2 84509 0 MPTPVILLK ______________________________ ______________________________ M M P L K E 0 0 0 0 0 0 0 0 0 1 2 1 1 0 2 0 1 0 0 1 0 0 9 0 1010.6198 Q99832 Q99832 2 10 CCT7 T-complex protein 1 subunit eta yes yes 2 0.011469 101.6 By MS/MS 6 0 1 1 326160 326160 0 10211 2295 10644 25425 17965 17965 1 2543.4 0 MQALTYLQR QGIACLCCDARRQVRMQALTYLQRALLVHD ARRQVRMQALTYLQRALLVHDLQKLDALEW R M Q Q R A 1 1 0 0 0 2 0 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 9 0 1122.5856 Q92538 Q92538 1562 1570 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0014453 128.6 By MS/MS 2 0 1 1 1563400 1563400 0 10212 2055 10645 25426 17966 17966 1337 1 77710 0 MQEHSDQVPVGNIPR LQTRGSRFIKFQEMKMQEHSDQVPVGNIPR MQEHSDQVPVGNIPRSITVLVEGENTRIAQ K M Q P R S 0 1 1 1 0 2 1 1 1 1 0 0 1 0 2 1 0 0 0 2 0 0 15 0 1705.8206 P33993 P33993 237 251 MCM7 DNA replication licensing factor MCM7 yes yes 3 0.033307 65.809 By MS/MS 5 0 1 1 4979700 4979700 0 10213 775 10646 25427 17967 17967 527 1 204690 0 MQELALSEGALPR MKAIIEEGDKEIATKMQELALSEGALPRHL TKMQELALSEGALPRHLHTAMFTISSDQRM K M Q P R H 2 1 0 0 0 1 2 1 0 0 3 0 1 0 1 1 0 0 0 0 0 0 13 0 1413.7286 O75165 O75165 600 612 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 7.8243E-12 200.93 By MS/MS 2 0 2 2 663280 663280 0 10214 287 10647;10648 25428;25429 17968;17969 17968 158 2 32969 0 MQEQQADLQR KHKIQLEQVQEWKSKMQEQQADLQRRLKEA EWKSKMQEQQADLQRRLKEARKEAKEALEA K M Q Q R R 1 1 0 1 0 4 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1245.5772 Q14203 Q14203 265 274 DCTN1 Dynactin subunit 1 yes yes 2 0.01001 128.01 By MS/MS 3 0 1 1 280310 280310 0 10215 1420 10649 25430 17970 17970 0 7317.6 0 MQFGVPLAR SEFCLHTARQYALDRMQFGVPLARNQLIQK QYALDRMQFGVPLARNQLIQKKLADMLTEI R M Q A R N 1 1 0 0 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 9 0 1017.543 Q92947 Q92947 320 328 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes yes 2 0.0060625 107.29 By MS/MS 7 0 1 1 4430700 4430700 0 10216 2092 10650 25431 17971 17971 1364 1 79178 0 MQGLEAHK ASVFGNTPLDVIKTRMQGLEAHKYRNTWDC LDVIKTRMQGLEAHKYRNTWDCGLQILKKE R M Q H K Y 1 0 0 0 0 1 1 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 8 0 912.44874 P53007 P53007 248 255 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.015115 104.06 By MS/MS 8.5 0.5 1 1 2 2248800 2248800 0 10217 996 10651 25432;25433 17972 17972 753 1 158290 0 MQGLEAHKYR ASVFGNTPLDVIKTRMQGLEAHKYRNTWDC VIKTRMQGLEAHKYRNTWDCGLQILKKEGL R M Q Y R N 1 1 0 0 0 1 1 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 10 1 1231.6132 P53007 P53007 248 257 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.013914 78.098 By MS/MS 8 0 1 1 0 0 0 10218 996 10652 25434 17973 17973 753 1 0 0 MQGQSPPAPTR EKPALLSQIDAEFEKMQGQSPPAPTRGISK EFEKMQGQSPPAPTRGISKHSTSGTDEGED K M Q T R G 1 1 0 0 0 2 0 1 0 0 0 0 1 0 3 1 1 0 0 0 0 0 11 0 1168.5659 Q14008 Q14008 812 822 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 6.7818E-05 166.69 By MS/MS By matching 2.25 0.433 3 1 3 1 1774600 1755000 19589 10219 1405 10653;10654 25435;25436;25437;25438 17974;17975 17975 1077 2 84331 16492 MQHQGHSR FVLLNFAEMNKLWVRMQHQGHSRDREKRER MNKLWVRMQHQGHSRDREKRERERQELRIL R M Q S R D 0 1 0 0 0 2 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 8 0 979.44063 Q96QK1 Q96QK1 197 204 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0085164 123.98 By MS/MS 5.5 0.5 1 1 2 181190 181190 0 10220 2242 10655 25439;25440 17976;17977 17976 2 3213.6 0 MQKEITALAPSTMK VLSGGTTMYPGIADRMQKEITALAPSTMKI RMQKEITALAPSTMKIKIIAPPERKYSVWI R M Q M K I 2 0 0 0 0 1 1 0 0 1 1 2 2 0 1 1 2 0 0 0 0 0 14 1 1547.8051 P60709;P63267;P68133;P68032;P62736;P63261 P60709 313 326 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 3 0.015573 65.038 By MS/MS By matching 7 0 2 1 1 2455500 2379200 76313 10221 1072;1179 10656 25441;25442 17978 17978 837;838 1 42516 313280 MQLLEIITTEK PEKVIGMHYFSPVDKMQLLEIITTEKTSKD PVDKMQLLEIITTEKTSKDTSASAVAVGLK K M Q E K T 0 0 0 0 0 1 2 0 0 2 2 1 1 0 0 0 2 0 0 0 0 0 11 0 1317.7214 P40939 P40939 506 516 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 3.4389E-07 186.74 By MS/MS By matching 5.29 2.05 1 3 1 1 1 6 1 14469000 14453000 16406 10222 835 10657;10658 25443;25444;25445;25446;25447;25448;25449 17979;17980;17981;17982 17980 588 4 565040 48545 MQLSGEGAK GATVFVQPLDLVKNRMQLSGEGAKTREYKT DLVKNRMQLSGEGAKTREYKTSFHALTSIL R M Q A K T 1 0 0 0 0 1 1 2 0 0 1 1 1 0 0 1 0 0 0 0 0 0 9 0 919.44332 Q02978 Q02978 49 57 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.0085853 107.9 By MS/MS By matching 4.75 3.27 1 1 2 3 1 7389000 7375900 13076 10223 1260 10659 25450;25451;25452;25453 17983;17984 17984 2 469900 111550 MQLVCCR LVVMQIDSFPQYSPKMQLVCCRAIVKVFLA SFPQYSPKMQLVCCRAIVKVFLALAAKGPV K M Q C R A 0 1 0 0 2 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 7 0 965.42451 P78527 P78527 453 459 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0099647 154.11 By MS/MS 1.5 0.5 1 1 2 790110 790110 0 10224 1197 10660 25454;25455 17985;17986 17985 2 38873 0 MQNDAGEFVDLYVPR ______________________________ MQNDAGEFVDLYVPRKCSASNRIIGAKDHA - M Q P R K 1 1 1 2 0 1 1 1 0 0 1 0 1 1 1 0 0 0 1 2 0 0 15 0 1752.8141 P63220 P63220 1 15 RPS21 40S ribosomal protein S21 yes yes 2 0.020295 62.088 By MS/MS 10 0 1 1 916210 916210 0 10225 1176 10661 25456 17987 17987 915 1 973840 0 MQNDAGEFVDLYVPRK ______________________________ QNDAGEFVDLYVPRKCSASNRIIGAKDHAS - M Q R K C 1 1 1 2 0 1 1 1 0 0 1 1 1 1 1 0 0 0 1 2 0 0 16 1 1880.9091 P63220 P63220 1 16 RPS21 40S ribosomal protein S21 yes yes 2 0.0030467 99.5 By MS/MS 10 0 1 1 87780 0 87780 10226 1176 10662 25457 17988 17988 915 1 0 2251500 MQNDVKLPQGQR AGGFVGTPADLVNVRMQNDVKLPQGQRRNY NVRMQNDVKLPQGQRRNYAHALDGLYRVAR R M Q Q R R 0 1 1 1 0 3 0 1 0 0 1 1 1 0 1 0 0 0 0 1 0 0 12 1 1412.7194 Q9UBX3 Q9UBX3 127 138 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 3 0.0013984 115.29 By MS/MS By matching 5.6 3.38 1 1 2 1 4 1 5315100 5287100 28017 10227 2761 10663 25458;25459;25460;25461;25462 17989;17990;17991;17992 17992 1613 4 548310 239020 MQTPVNIPVPVLR ______________________________ ______________________________ - M Q L R L 0 1 1 0 0 1 0 0 0 1 1 0 1 0 3 0 1 0 0 3 0 0 13 0 1462.833 Q9H840 Q9H840 1 13 GEMIN7 Gem-associated protein 7 yes yes 2 0.0055003 83.397 By MS/MS 10 0 1 1 342910 342910 0 10228 2520 10664 25463 17993 17993 1528 1 364480 0 MQVDPQK TTHTALVPLDLVKCRMQVDPQKYKGIFNGF PLDLVKCRMQVDPQKYKGIFNGFSVTLKED R M Q Q K Y 0 0 0 1 0 2 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 7 0 844.41129 Q00325 Q00325 93 99 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.040642 98.523 By MS/MS 1 0 1 1 565030 565030 0 10229 1230 10665 25464 17994 17994 1002 1 27606 0 MQYATGPLLK EASANLGGVPSKRLKMQYATGPLLKFQICV SKRLKMQYATGPLLKFQICVSUGYRRVFEE K M Q L K F 1 0 0 0 0 1 0 1 0 0 2 1 1 0 1 0 1 0 1 0 0 0 10 0 1120.5951 P62341 P62341 33 42 SELT Selenoprotein T yes yes 2 0.020572 85.355 By MS/MS 10 0 1 1 244940 244940 0 10230 1134 10666 25465 17995 17995 889 1 260350 0 MQYSMEYFQFMK ERSVRKQNVQFMHNRMQYSMEYFQFMKKLL HNRMQYSMEYFQFMKKLLTCNGVYLNPPPG R M Q M K K 0 0 0 0 0 2 1 0 0 0 0 1 3 2 0 1 0 0 2 0 0 0 12 0 1631.6822 Q93008 Q93008 2003 2014 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.00016319 137.01 By MS/MS 1.5 0.5 1 1 2 258760 258760 0 10231 2096 10667 25466;25467 17996 17996 1373;1374;1375 1 12824 0 MREDYDSVEQDGDEPGPQR RKGRGFGSEEGSRARMREDYDSVEQDGDEP YDSVEQDGDEPGPQRSVEGWILFVTGVHEE R M R Q R S 0 2 0 4 0 2 3 2 0 0 0 0 1 0 2 1 0 0 1 1 0 0 19 1 2221.9182 Q9Y5S9 Q9Y5S9 50 68 RBM8A RNA-binding protein 8A yes yes 3 0.0077832 71.073 By MS/MS 9 0 1 1 117520 117520 0 10232 2980 10668 25468 17997 17997 1715 1 67445 0 MREIVHLQAGQCGNQIGAK ______________________________ VHLQAGQCGNQIGAKFWEVISDEHGIDPTG - M R A K F 2 1 1 0 1 3 1 3 1 2 1 1 1 0 0 0 0 0 0 1 0 0 19 1 2109.0572 P68371;P04350 P68371 1 19 TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 2;3;4 2.4085E-05 131.45 By MS/MS 6 0 3 3 38488000 38488000 0 10233 1187;451 10669 25469;25470;25471 17998;17999;18000 17998 3 300130 0 MRNQLELAAR KNAEMTRQLREREQRMRNQLELAARGPLRQ EREQRMRNQLELAARGPLRQTFTHNPLLQP R M R A R G 2 2 1 0 0 1 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 10 1 1200.6397 Q15070 Q15070 385 394 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 3 0.011193 88.681 By MS/MS 7 0 1 1 1489900 1489900 0 10234 1477 10670 25472 18001 18001 1154 1 26626 0 MRPGVACSVSQAQK EIRNFLGEKYIRRVRMRPGVACSVSQAQKD RMRPGVACSVSQAQKDELILEGNDIELVSN R M R Q K D 2 1 0 0 1 2 0 1 0 0 0 1 1 0 1 2 0 0 0 2 0 0 14 1 1517.7443 P32969 P32969 128 141 RPL9 60S ribosomal protein L9 yes yes 3 0.013812 77.204 By MS/MS 9 0 1 1 154790 154790 0 10235 765 10671 25473 18002 18002 520 1 88837 0 MRPQQAPVSGK ______________________________ ______________________________ - M R G K V 1 1 0 0 0 2 0 1 0 0 0 1 1 0 2 1 0 0 0 1 0 0 11 1 1197.6288 Q7Z5G4 Q7Z5G4 1 11 GOLGA7 Golgin subfamily A member 7 yes yes 2 0.047711 61.593 By MS/MS 10 0 1 1 452230 452230 0 10236 1799 10672 25474 18003 18003 1 480670 0 MSASILLSK LQDPPGELAVTANSRMSASILLSKLFDDLK VTANSRMSASILLSKLFDDLKCDAERENFH R M S S K L 1 0 0 0 0 0 0 0 0 1 2 1 1 0 0 3 0 0 0 0 0 0 9 0 948.5314 Q9H3U1 Q9H3U1 369 377 UNC45A Protein unc-45 homolog A yes yes 2 0.00019188 158.87 By MS/MS 4 0 1 1 665820 665820 0 10237 2493 10673 25475 18004 18004 1521 1 18176 0 MSASSLLEQR ______________________________ ______________________________ - M S Q R P 1 1 0 0 0 1 1 0 0 0 2 0 1 0 0 3 0 0 0 0 0 0 10 0 1120.5547 Q9Y5A9 Q9Y5A9 1 10 YTHDF2 YTH domain-containing family protein 2 yes yes 2 0.041395 55.37 By MS/MS 8 0 1 1 629200 629200 0 10238 2966 10674 25476 18005 18005 1711 0 41508 0 MSATFIGNSTAIQELFK NVKTAVCDIPPRGLKMSATFIGNSTAIQEL ATFIGNSTAIQELFKRISEQFTAMFRRKAF K M S F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 2 2 0 0 0 0 0 17 0 1856.9342 P68371;Q13885;Q9BVA1 P68371 363 379 TUBB4B;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 9.0417E-83 315.29 By MS/MS 6.5 0.5 1 1 2 7523200 7523200 0 10239 1187;1400;2375 10675;10676 25477;25478 18006;18007 18006 929 2 60089 0 MSATFIGNSTAIQELFKR NVKTAVCDIPPRGLKMSATFIGNSTAIQEL TFIGNSTAIQELFKRISEQFTAMFRRKAFL K M S K R I 2 1 1 0 0 1 1 1 0 2 1 1 1 2 0 2 2 0 0 0 0 0 18 1 2013.0353 P68371;Q13885;Q9BVA1 P68371 363 380 TUBB4B;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 3 0.0045524 89.466 By MS/MS 6 0 1 1 1252100 1252100 0 10240 1187;1400;2375 10677 25479 18008 18008 1 9763.7 0 MSDGLFLQK HRSNVTAVHKANIMRMSDGLFLQKCREVAE KANIMRMSDGLFLQKCREVAESCKDIKFNE R M S Q K C 0 0 0 1 0 1 0 1 0 0 2 1 1 1 0 1 0 0 0 0 0 0 9 0 1037.5216 P50213 P50213 206 214 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 3.7805E-07 193.86 By MS/MS 7.5 0.5 1 1 2 10758000 10758000 0 10241 943 10678 25480;25481 18009;18010 18009 697 2 310230 0 MSEQQDLER LGFTVGRYLAKKKMRMSEQQDLERNADTLP AKKKMRMSEQQDLERNADTLPDQEELIQSA R M S E R N 0 1 0 1 0 2 2 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 9 0 1134.4975 Q5VYK3 Q5VYK3 771 779 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00020357 163.88 By MS/MS 2.33 0.471 2 1 3 682170 682170 0 10242 1657 10679;10680 25482;25483;25484 18011;18012 18012 1205 2 25203 0 MSGCDLGPDGR GYYNQSEDGSHTLQRMSGCDLGPDGRLLRG TLQRMSGCDLGPDGRLLRGYDQSAYDGKDY R M S G R L 0 1 0 2 1 0 0 3 0 0 1 0 1 0 1 1 0 0 0 0 0 0 11 0 1163.4699 P10321 P10321 122 132 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 5.5582E-05 164.66 By MS/MS 7 0 1 1 2616800 2616800 0 10243 536 10681 25485 18013 18013 320 1 46763 0 MSGECAPNVSVSVSTSHTTISGGGSR EIATYRTLLEGEESRMSGECAPNVSVSVST SVSTSHTTISGGGSRGGGGGGYGSGGSSYG R M S S R G 1 1 1 0 1 0 1 4 1 1 0 0 1 0 1 7 3 0 0 3 0 0 26 0 2564.1595 P04264;CON__P04264 P04264 493 518 KRT1 Keratin, type II cytoskeletal 1 no no 3 4.3794E-06 98.533 By matching By MS/MS 2.2 0.748 1 2 2 2 3 1016700 320080 696640 + 10244 450;45 10682 25486;25487;25488;25489;25490 18014;18015;18016;18017 18016 29 4 11300 824680 MSIHLIHMR VAYGLYKLKSRGNTKMSIHLIHMRVAAQGF SRGNTKMSIHLIHMRVAAQGFVVGAMTVGM K M S M R V 0 1 0 0 0 0 0 0 2 2 1 0 2 0 0 1 0 0 0 0 0 0 9 0 1136.5947 Q9Y241;A8MV81 Q9Y241 56 64 HIGD1A;HIGD1C HIG1 domain family member 1A, mitochondrial;HIG1 domain family member 1C yes no 3 0.010191 88.819 By MS/MS 10 0 1 1 477110 477110 0 10245 2866 10683 25491 18018 18018 1656;1657 1 507120 0 MSINAEEVVVGDLVEVK NMVPQQALVIRNGEKMSINAEEVVVGDLVE INAEEVVVGDLVEVKGGDRIPADLRIISAN K M S V K G 1 0 1 1 0 0 3 1 0 1 1 1 1 0 0 1 0 0 0 5 0 0 17 0 1829.9445 P05023 P05023 178 194 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2;3 9.3599E-44 263.98 By MS/MS 2.7 1.27 2 3 2 2 1 10 2918100 2918100 0 10246 463 10684;10685 25492;25493;25494;25495;25496;25497;25498;25499;25500;25501 18019;18020;18021;18022;18023;18024;18025;18026;18027 18020 251 9 109590 0 MSLSPSSPR GHRRTESEMSARIAKMSLSPSSPRHEDQLE SARIAKMSLSPSSPRHEDQLEVTREPARRL K M S P R H 0 1 0 0 0 0 0 0 0 0 1 0 1 0 2 4 0 0 0 0 0 0 9 0 960.46987 Q86XL3 Q86XL3 801 809 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.012593 97.635 By MS/MS 4 0 1 1 514510 514510 0 10247 1841 10686 25502 18028;18029 18029 1276 2 14046 0 MSMKEVDEQMLNVQNK RHGRYLTVAAVFRGRMSMKEVDEQMLNVQN SMKEVDEQMLNVQNKNSSYFVEWIPNNVKT R M S N K N 0 0 2 1 0 2 2 0 0 0 1 2 3 0 0 1 0 0 0 2 0 0 16 1 1922.89 P07437;P68371;Q13885;Q9BVA1 P68371 321 336 TUBB;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 2;3 1.0254E-28 251.91 By MS/MS By MS/MS 6.81 0.965 15 10 3 3 27 4 129750000 129590000 159070 10248 1187;490;1400;2375 10687;10688;10689;10690 25503;25504;25505;25506;25507;25508;25509;25510;25511;25512;25513;25514;25515;25516;25517;25518;25519;25520;25521;25522;25523;25524;25525;25526;25527;25528;25529;25530;25531;25532;25533 18030;18031;18032;18033;18034;18035;18036;18037;18038;18039;18040;18041;18042;18043;18044;18045;18046 18043 278;281;282 17 1630100 487870 MSNYDTDLFVPYFEAIQK TGMGLERLVSVLQNKMSNYDTDLFVPYFEA YDTDLFVPYFEAIQKGTGARPYTGKVGAED K M S Q K G 1 0 1 2 0 1 1 0 0 1 1 1 1 2 1 1 1 0 2 1 0 0 18 0 2180.0136 P49588 P49588 255 272 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.037407 61.409 By MS/MS 4 0 1 1 63013 63013 0 10249 921 10691 25534 18047 18047 687 1 1720.2 0 MSPDEGQEELEEVQAELK LFAIFGIRMLREGLKMSPDEGQEELEEVQA DEGQEELEEVQAELKKKDEEFQRTKLLNGP K M S L K K 1 0 0 1 0 2 6 1 0 0 2 1 1 0 1 1 0 0 0 1 0 0 18 0 2059.9256 Q9HC07 Q9HC07 181 198 TMEM165 Transmembrane protein 165 yes yes 2 1.1274E-07 154.88 By MS/MS 2.4 1.02 1 2 1 1 5 845210 845210 0 10250 2555 10692;10693 25535;25536;25537;25538;25539 18048;18049 18048 1539 2 32753 0 MSPYKDILETHLR AHLPDVCVNLMKALKMSPYKDILETHLREK LKMSPYKDILETHLREKITAQSIEELCAVN K M S L R E 0 1 0 1 0 0 1 0 1 1 2 1 1 0 1 1 1 0 1 0 0 0 13 1 1601.8236 P78527 P78527 1408 1420 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0063676 89.46 By MS/MS 1 0 1 1 404950 404950 0 10251 1197 10694 25540 18050 18050 966 1 19785 0 MSQALGR ELLEDYYQSGRMLLRMSQALGRIVLAGREM QSGRMLLRMSQALGRIVLAGREMTRLAGFT R M S G R I 1 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 7 0 761.38541 P28288 P28288 367 373 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.047827 95.352 By MS/MS 5 0 1 1 586790 586790 0 10252 716 10695 25541 18051 18051 1 24119 0 MSQVPAPVPLMSLR ARPPPSMSAAGLAARMSQVPAPVPLMSLRT RMSQVPAPVPLMSLRTAPAANLASRIPAAS R M S L R T 1 1 0 0 0 1 0 0 0 0 2 0 2 0 3 2 0 0 0 2 0 0 14 0 1524.8156 Q9UQ35 Q9UQ35 2208 2221 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.014773 64.878 By MS/MS 1 0 1 1 111350 111350 0 10253 2858 10696 25542 18052 18052 1641;1642 1 5440.5 0 MSQYLDSLK VYLKGVHPKFPEGGKMSQYLDSLKVGDVVE FPEGGKMSQYLDSLKVGDVVEFRGPSGLLT K M S L K V 0 0 0 1 0 1 0 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 9 0 1083.527 Q9UHQ9 Q9UHQ9 131 139 CYB5R1 NADH-cytochrome b5 reductase 1 yes yes 2 0.025612 86.882 By MS/MS 8 0 1 1 736720 736720 0 10254 2781 10697 25543 18053 18053 1622 1 48601 0 MSRSVLQPSQQK ______________________________ ______________________________ - M S Q K L 0 1 0 0 0 3 0 0 0 0 1 1 1 0 1 3 0 0 0 1 0 0 12 1 1387.7242 Q9Y2A7 Q9Y2A7 1 12 NCKAP1 Nck-associated protein 1 yes yes 2 0.047401 54.539 By MS/MS 10 0 1 1 65221 65221 0 10255 2882 10698 25544 18054 18054 0 69323 0 MSSTFIGNSTAIQELFK NVKVAVCDIPPRGLKMSSTFIGNSTAIQEL STFIGNSTAIQELFKRISEQFTAMFRRKAF K M S F K R 1 0 1 0 0 1 1 1 0 2 1 1 1 2 0 3 2 0 0 0 0 0 17 0 1872.9291 Q13509 Q13509 363 379 TUBB3 Tubulin beta-3 chain yes yes 2 6.4361E-15 194.86 By MS/MS 6.33 0.471 2 1 3 2134700 2134700 0 10256 1377 10699;10700 25545;25546;25547 18055;18056;18057 18056 1069 3 18069 0 MSTAGKVIK ______________________________ ______________________________ - M S I K C 1 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 1 0 0 1 0 0 9 1 933.53174 P07327;P00326;P00325 P07327 1 9 ADH1A;ADH1C;ADH1B Alcohol dehydrogenase 1A;Alcohol dehydrogenase 1C;Alcohol dehydrogenase 1B yes no 2 0.023432 80.229 By MS/MS 6 0 1 1 3815400 3815400 0 10257 423 10701 25548 18058 18058 224 1 29753 0 MSTSPEAFLALR ESKVPADLLKRAFVRMSTSPEAFLALRSHF FVRMSTSPEAFLALRSHFASSHALICISHW R M S L R S 2 1 0 0 0 0 1 0 0 0 2 0 1 1 1 2 1 0 0 0 0 0 12 0 1321.67 P78527 P78527 3890 3901 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.3809E-24 236.32 By MS/MS 4.17 2.54 1 1 1 1 1 1 6 8471300 8471300 0 10258 1197 10702 25549;25550;25551;25552;25553;25554 18059;18060;18061;18062;18063 18060 967 5 348230 0 MSVDAVEIETLR AAEMHKMKSTTQANRMSVDAVEIETLRKTV ANRMSVDAVEIETLRKTVEDYFCFCYGKAL R M S L R K 1 1 0 1 0 0 2 0 0 1 1 0 1 0 0 1 1 0 0 2 0 0 12 0 1361.6861 P78347 P78347 102 113 GTF2I General transcription factor II-I yes yes 2 2.7081E-07 183.85 By MS/MS 3 0 2 2 1514200 1514200 0 10259 1194 10703;10704 25555;25556 18064;18065 18064 940 2 39527 0 MSVDAVEIETLRK AAEMHKMKSTTQANRMSVDAVEIETLRKTV NRMSVDAVEIETLRKTVEDYFCFCYGKALG R M S R K T 1 1 0 1 0 0 2 0 0 1 1 1 1 0 0 1 1 0 0 2 0 0 13 1 1489.781 P78347 P78347 102 114 GTF2I General transcription factor II-I yes yes 2 0.0018908 135.99 By MS/MS 3 0 2 2 840490 840490 0 10260 1194 10705;10706 25557;25558 18066;18067 18066 940 2 21941 0 MSYLLLPLDSSK EESTVFSQAIHYANRMSYLLLPLDSSKSRL ANRMSYLLLPLDSSKSRLLRERAGLGDLES R M S S K S 0 0 0 1 0 0 0 0 0 0 4 1 1 0 1 3 0 0 1 0 0 0 12 0 1365.7214 O95248 O95248 765 776 SBF1 Myotubularin-related protein 5 yes yes 2 0.014432 84.658 By MS/MS 2 0.816 1 1 1 3 144480 144480 0 10261 379 10707 25559;25560;25561 18068 18068 202 1 5485.3 0 MTADGRLPADQR TGAFVGTPAEVALIRMTADGRLPADQRRGY LIRMTADGRLPADQRRGYKNVFNALIRITR R M T Q R R 2 2 0 2 0 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 12 1 1329.6459 Q02978 Q02978 147 158 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 3 0.0034982 99.343 By MS/MS 8.5 0.5 1 1 2 20883000 20883000 0 10262 1260 10708 25562;25563 18069 18069 1019 1 1549100 0 MTALELAR GRTAVVTGANSGIGKMTALELARRGARVVL ANSGIGKMTALELARRGARVVLACRSQERG K M T A R R 2 1 0 0 0 0 1 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 8 0 903.48479 Q6UX07 Q6UX07 51 58 DHRS13 Dehydrogenase/reductase SDR family member 13 yes yes 2 0.050711 82.279 By MS/MS 7 0 1 1 750450 750450 0 10263 1732 10709 25564 18070 18070 1 13411 0 MTDAAVSFAK ______________________________ ______________________________ - M T A K D 3 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 1 0 0 10 0 1039.5008 P05141 P05141 1 10 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2 0.0087065 90.108 By MS/MS 1.5 0.5 1 1 2 343240 343240 0 10264 469 10710 25565;25566 18071;18072 18071 2 16851 0 MTDVFEGSIIR VYTWATGATFAHICKMTDVFEGSIIRCMRR HICKMTDVFEGSIIRCMRRLEELLRQMCQA K M T I R C 0 1 0 1 0 0 1 1 0 2 0 0 1 1 0 1 1 0 0 1 0 0 11 0 1266.6278 P42285 P42285 985 995 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 2 0.0010555 126.39 By MS/MS 4 0 1 1 473790 473790 0 10265 848 10711 25567 18073 18073 600 1 12934 0 MTEQAISFAK ______________________________ ______________________________ - M T A K D 2 0 0 0 0 1 1 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 10 0 1124.5536 P12236 P12236 1 10 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.00017759 145.99 By MS/MS 3 2.92 2 1 1 4 1433800 1433800 0 10266 563 10712;10713 25568;25569;25570;25571 18074;18075;18076;18077 18075 4 78661 0 MTEWETAAPAVAETPDIK ______________________________ WETAAPAVAETPDIKLFGKWSTDDVQINDI - M T I K L 4 0 0 1 0 0 3 0 0 1 0 1 1 0 2 0 3 1 0 1 0 0 18 0 1958.9295 P46782 P46782 1 18 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.0016097 96.059 By MS/MS 9 0 1 1 627820 627820 0 10267 888 10714 25572 18078 18078 630 1 360310 0 MTGESECLNPSTQSR EEFARKLQEQEVFFKMTGESECLNPSTQSR MTGESECLNPSTQSRISKFYPIPSLHSTGS K M T S R I 0 1 1 0 1 1 2 1 0 0 1 0 1 0 1 3 2 0 0 0 0 0 15 0 1695.7192 Q9H2G2 Q9H2G2 1206 1220 SLK STE20-like serine/threonine-protein kinase yes yes 2 1.3964E-05 168.98 By MS/MS 2 0 1 1 310530 310530 0 10268 2476 10715 25573 18079 18079 1 15435 0 MTGFELTEGVK EYGGREMQDLGGGERMTGFELTEGVKTSGM GGERMTGFELTEGVKTSGMPEICQEYSGTL R M T V K T 0 0 0 0 0 0 2 2 0 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 1210.5904 Q02413 Q02413 651 661 DSG1 Desmoglein-1 yes yes 2 0.0070811 98.048 By MS/MS 4.5 1.71 1 1 1 1 1 1 6 291550 0 291550 10269 1253 10716 25574;25575;25576;25577;25578;25579 18080;18081;18082 18080 1014 3 0 646960 MTGLNLQK KPTFMDEEVQSILTKMTGLNLQKTFKPAIQ VQSILTKMTGLNLQKTFKPAIQELKPPTYK K M T Q K T 0 0 1 0 0 1 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 8 0 903.48479 P82650 P82650 82 89 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 0.011906 110.12 By MS/MS 7 0 1 1 8041900 8041900 0 10270 1201 10717 25580 18083 18083 987 1 143710 0 MTILQTYFR RGSCSTEVEKETQEKMTILQTYFRQNRDEV KETQEKMTILQTYFRQNRDEVLDNLLAFVC K M T F R Q 0 1 0 0 0 1 0 0 0 1 1 0 1 1 0 0 2 0 1 0 0 0 9 0 1171.606 O75348 O75348 81 89 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 2 0.045642 78.149 By MS/MS 10 0 1 1 97971 97971 0 10271 298 10718 25581 18084 18084 1 104130 0 MTISQQEFGR IATTGTEDSDDALLKMTISQQEFGRTGLPD DALLKMTISQQEFGRTGLPDLSSMTEEEQI K M T G R T 0 1 0 0 0 2 1 1 0 1 0 0 1 1 0 1 1 0 0 0 0 0 10 0 1195.5656 P55036 P55036 263 272 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2 3.5102E-05 172.98 By MS/MS By matching 6 0 2 1 1 2515900 2493000 22914 10272 1023 10719 25582;25583 18085 18085 1 19441 70276 MTLADIER DILFQLADLYEPRGRMTLADIERIAPLEEG LYEPRGRMTLADIERIAPLEEGTLPFNLAE R M T E R I 1 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 8 0 947.47462 Q9UJS0 Q9UJS0 285 292 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.0011349 162.25 By MS/MS By matching 5 0 4 2 2 14132000 14064000 68103 10273 2798 10720;10721 25584;25585;25586;25587 18086;18087 18086 1626 2 578080 201520 MTLDDFR TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA R M T F R I 0 1 0 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 896.4062 P35527;CON__P35527 P35527 234 240 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.017211 134.06 By MS/MS By MS/MS 5.56 2.6 1 3 2 4 2 1 1 2 8 8 13838000 5973600 7864700 + 10274 791 10722;10723 25588;25589;25590;25591;25592;25593;25594;25595;25596;25597;25598;25599;25600;25601;25602;25603 18088;18089;18090;18091;18092;18093 18089 534 6 3618200 18996000 MTLDTLSIYETPSMGLLDK WPIFKWSHDGKFFARMTLDTLSIYETPSMG TLSIYETPSMGLLDKKSLKISGIKDFSWSP R M T D K K 0 0 0 2 0 0 1 1 0 1 4 1 2 0 1 2 3 0 1 0 0 0 19 0 2127.0479 P55884 P55884 441 459 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 6.9675E-16 193.11 By MS/MS 3.5 0.5 1 1 2 1381700 1381700 0 10275 1040 10724 25604;25605 18094 18094 807;808 1 37571 0 MTLDTLSIYETPSMGLLDKK WPIFKWSHDGKFFARMTLDTLSIYETPSMG LSIYETPSMGLLDKKSLKISGIKDFSWSPG R M T K K S 0 0 0 2 0 0 1 1 0 1 4 2 2 0 1 2 3 0 1 0 0 0 20 1 2255.1429 P55884 P55884 441 460 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2;3 8.1095E-06 126.19 By MS/MS 4.4 1.02 1 2 1 1 5 6738900 6738900 0 10276 1040 10725 25606;25607;25608;25609;25610 18095;18096 18095 807;808 2 171480 0 MTNGFSGADLTEICQR KSPVAKDVDLEFLAKMTNGFSGADLTEICQ TNGFSGADLTEICQRACKLAIRESIESEIR K M T Q R A 1 1 1 1 1 1 1 2 0 1 1 0 1 1 0 1 2 0 0 0 0 0 16 0 1798.7978 P55072 P55072 678 693 VCP Transitional endoplasmic reticulum ATPase yes yes 2 2.7816E-109 351.61 By MS/MS 4.5 0.5 1 1 2 2554000 2554000 0 10277 1026 10726 25611;25612 18097 18097 801 1 74543 0 MTNQYGILFK ______________________________ ______________________________ - M T F K Q 0 0 1 0 0 1 0 1 0 1 1 1 1 1 0 0 1 0 1 0 0 0 10 0 1213.6165 Q9GZS3 Q9GZS3 1 10 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 2 0.041302 60.019 By MS/MS 8 0 1 1 139090 139090 0 10278 2442 10727 25613 18098 18098 1501 1 9175.9 0 MTQLVLPGMVER VIKKMININILSVCKMTQLVLPGMVERSKG VCKMTQLVLPGMVERSKGAILNISSGSGML K M T E R S 0 1 0 0 0 1 1 1 0 0 2 0 2 0 1 0 1 0 0 2 0 0 12 0 1372.7207 Q53GQ0 Q53GQ0 168 179 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.00021949 142.08 By MS/MS By matching 6 3.21 1 1 3 1 5 1 31038000 31005000 33235 10279 1584 10728;10729 25614;25615;25616;25617;25618;25619 18099;18100;18101;18102;18103 18101 1187;1188 5 2194100 283540 MTTETASEDDNFGTAQSNK LLGDLLFHISGVTGKMTTETASEDDNFGTA TASEDDNFGTAQSNKAIITALGVERRNRVL K M T N K A 2 0 2 2 0 1 2 1 0 0 0 1 1 1 0 2 4 0 0 0 0 0 19 0 2045.8484 Q92616 Q92616 1853 1871 GCN1L1 Translational activator GCN1 yes yes 2;3 2.5295E-116 351.2 By MS/MS 2.4 1.02 1 2 1 1 5 1476400 1476400 0 10280 2068 10730;10731 25620;25621;25622;25623;25624 18104;18105 18104 1351 2 66138 0 MTTTQILDVVR DRLKSLTMHHLKCLKMTTTQILDVVRELKH KCLKMTTTQILDVVRELKHLNHLDISDDKQ K M T V R E 0 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 3 0 0 2 0 0 11 0 1275.6857 Q9C0D3 Q9C0D3 224 234 ZYG11B Protein zyg-11 homolog B yes yes 2 0.027041 96.171 By MS/MS 5 0 1 1 116180 116180 0 10281 2436 10732 25625 18106 18106 1498 0 4775.3 0 MTTTSSVEGK LPWPPLRNEFRYFQRMTTTSSVEGKQNLVI RYFQRMTTTSSVEGKQNLVIMGKKTWFSIP R M T G K Q 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 2 3 0 0 1 0 0 10 0 1039.4856 P00374;Q86XF0 P00374 38 47 DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 2 6.8021E-07 182.98 By MS/MS 9 0 1 1 235300 235300 0 10282 426 10733 25626 18107 18107 225 1 135040 0 MVAAATNNLCEAANAAVQGHASQEK LDDGQWSQGLISAARMVAAATNNLCEAANA EAANAAVQGHASQEKLISSAKQVAASTAQL R M V E K L 8 0 3 0 1 2 2 1 1 0 1 1 1 0 0 1 1 0 0 2 0 0 25 0 2555.1857 Q9Y490 Q9Y490 2399 2423 TLN1 Talin-1 yes yes 3 2.4747E-05 93.572 By MS/MS 2.5 0.5 1 1 2 757010 757010 0 10283 2947 10734 25627;25628 18108 18108 1692 1 30868 0 MVDILACR YVDRLLCTPFRVLARMVDILACRRVEMLLA PFRVLARMVDILACRRVEMLLAANLQSSMA R M V C R R 1 1 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 8 0 976.48341 P42858 P42858 2007 2014 HTT Huntingtin yes yes 2 0.02524 96.492 By MS/MS 1 0 1 1 114620 114620 0 10284 858 10735 25629 18109 18109 618 1 5600 0 MVDMMDLPRSR ______________________________ ______________________________ - M V S R I 0 2 0 2 0 0 0 0 0 0 1 0 3 0 1 1 0 0 0 1 0 0 11 1 1349.6254 P35244 P35244 1 11 RPA3 Replication protein A 14 kDa subunit yes yes 2 0.045879 41.448 By MS/MS 6 0 1 1 540450 540450 0 10285 784 10736 25630 18110 18110 0 4214.4 0 MVDVGGQR GIIEYPFDLENIIFRMVDVGGQRSERRKWI LENIIFRMVDVGGQRSERRKWIHCFENVTS R M V Q R S 0 1 0 1 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 2 0 0 8 0 860.41744 P29992;O95837;P50148;P19086;Q03113;Q14344 P29992 203 210 GNA11;GNA14;GNAQ;GNAZ;GNA12;GNA13 Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein G(z) subunit alpha;Guanine nucleotide-binding protein subunit alpha-12;Guanine nucleotide-binding protein subunit alpha-13 no no 2 0.0071159 119.17 By MS/MS 7 0 1 1 1627900 1627900 0 10286 727;1430;1261 10737 25631 18111 18111 497 1 29091 0 MVDVVEKEDVNEAIR LLAILRLSTALARLRMVDVVEKEDVNEAIR MVDVVEKEDVNEAIRLMEMSKDSLLGDKGQ R M V I R L 1 1 1 2 0 0 3 0 0 1 0 1 1 0 0 0 0 0 0 4 0 0 15 1 1744.8665 P33993 P33993 621 635 MCM7 DNA replication licensing factor MCM7 yes yes 3 3.9825E-06 149.3 By MS/MS 5 0.816 2 2 2 6 14454000 14454000 0 10287 775 10738;10739 25632;25633;25634;25635;25636;25637 18112;18113 18112 528 2 480870 0 MVEGFFDR SEAVADREDDPNFFKMVEGFFDRGASIVED DDPNFFKMVEGFFDRGASIVEDKLVEDLRT K M V D R G 0 1 0 1 0 0 1 1 0 0 0 0 1 2 0 0 0 0 0 1 0 0 8 0 999.4484 P00367;P49448 P00367 69 76 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.03015 99.139 By MS/MS 6 0 1 1 979710 979710 0 10288 425 10740 25638 18114 18114 1 7639.8 0 MVFINNIALAQIK QKMLNGLEDSIGLSKMVFINNIALAQIKNN SKMVFINNIALAQIKNNNIDAAIENIENML K M V I K N 2 0 2 0 0 1 0 0 0 3 1 1 1 1 0 0 0 0 0 1 0 0 13 0 1473.8378 P42704 P42704 1177 1189 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.1204E-25 244.8 By MS/MS 4 0.816 1 1 1 3 6992900 6992900 0 10289 854 10741 25639;25640;25641 18115 18115 613 1 183780 0 MVGGGGVGGGLLENANPLIYQR ______________________________ GGGLLENANPLIYQRSGERPVTAGEEDEQV - M V Q R S 1 1 2 0 0 1 1 7 0 1 3 0 1 0 1 0 0 0 1 2 0 0 22 0 2171.1157 Q9Y3D0 Q9Y3D0 1 22 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 2 1.154E-05 107.14 By MS/MS 10 0 1 1 87753 87753 0 10290 2929 10742 25642 18116;18117 18116 1685 2 93272 0 MVGGVLVER IDTLKEVDETRKCYRMVGGVLVERTVKEVL TRKCYRMVGGVLVERTVKEVLPALENNKEQ R M V E R T 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 3 0 0 9 0 958.52699 Q9UHV9 Q9UHV9 73 81 PFDN2 Prefoldin subunit 2 yes yes 2 0.00368 114.89 By MS/MS 10 0 1 1 2494000 2494000 0 10291 2783 10743 25643 18118 18118 1623 1 2650900 0 MVGVPAALDMMLTGR LGALPGAGGTQRLPKMVGVPAALDMMLTGR MVGVPAALDMMLTGRSIRADRAKKMGLVDQ K M V G R S 2 1 0 1 0 0 0 2 0 0 2 0 3 0 1 0 1 0 0 2 0 0 15 0 1560.7826 P40939 P40939 191 205 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 2.4273E-05 136.53 By MS/MS 5 0 1 1 1730500 1730500 0 10292 835 10744 25644 18119 18119 589;590;591 1 71130 0 MVIITGPPEAQFK SIKIAPPETPDSKVRMVIITGPPEAQFKAQ VRMVIITGPPEAQFKAQGRIYGKLKEENFF R M V F K A 1 0 0 0 0 1 1 1 0 2 0 1 1 1 2 0 1 0 0 1 0 0 13 0 1429.7639 Q9NZI8;Q9Y6M1;O00425 Q9NZI8 453 465 IGF2BP1;IGF2BP2;IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 2;Insulin-like growth factor 2 mRNA-binding protein 3 no no 2 2.5061E-05 163.38 By MS/MS 5 0 2 2 6392900 6392900 0 10293 2711;93 10745;10746 25645;25646 18120;18121 18120 66 2 262780 0 MVINHLEK AQTTRTAYGPNGMNKMVINHLEKLFVTNDA GPNGMNKMVINHLEKLFVTNDAATILRELE K M V E K L 0 0 1 0 0 0 1 0 1 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 982.52699 P50990 P50990 55 62 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.0029878 150.05 By MS/MS 5.83 2.67 1 1 2 1 1 6 64296000 64296000 0 10294 955 10747;10748 25647;25648;25649;25650;25651;25652 18122;18123;18124;18125;18126 18126 708 5 534070 0 MVKDQQEAEK ELEVKNAAANDKLKKMVKDQQEAEKKKVMS DKLKKMVKDQQEAEKKKVMSQEIQEQLHKQ K M V E K K 1 0 0 1 0 2 2 0 0 0 0 2 1 0 0 0 0 0 0 1 0 0 10 1 1204.5758 Q14204 Q14204 3243 3252 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.00053047 168.83 By MS/MS 1.33 0.471 2 1 3 406650 406650 0 10295 1421 10749 25653;25654;25655 18127;18128 18127 2 19899 0 MVLAAAGGVEHQQLLDLAQK ADLTEYLSTHYKAPRMVLAAAGGVEHQQLL AGGVEHQQLLDLAQKHLGGIPWTYAEDAVP R M V Q K H 4 0 0 1 0 3 1 2 1 0 4 1 1 0 0 0 0 0 0 2 0 0 20 0 2091.1147 P31930 P31930 229 248 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 3 0.0018234 84.41 By MS/MS 6.5 0.5 1 1 2 2760300 2760300 0 10296 756 10750 25656;25657 18129 18129 510 1 30746 0 MVLLDLPSISSQVVR MVGAEQLLLDTHSLKMVLLDLPSISSQVVR MVLLDLPSISSQVVRKAPASYTKIVVKGMT K M V V R K 0 1 0 1 0 1 0 0 0 1 3 0 1 0 1 3 0 0 0 3 0 0 15 0 1655.928 Q5VIR6 Q5VIR6 705 719 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.00033883 123.84 By MS/MS 4 0 1 1 277100 277100 0 10297 1645 10751 25658 18130 18130 1200 1 7564.5 0 MVLVGDVKDR ALIHKERKKANEVDRMVLVGDVKDRVAILV NEVDRMVLVGDVKDRVAILVDDMADTCGTI R M V D R V 0 1 0 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 3 0 0 10 1 1130.6118 P60891;P11908 P60891 205 214 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 2;3 0.0046206 102.06 By MS/MS 8 0 2 2 2542200 2542200 0 10298 1076;559 10752;10753 25659;25660 18131;18132 18131 352 2 167710 0 MVNDAEKFAEEDKK ITNDQNRLTPEEIERMVNDAEKFAEEDKKL RMVNDAEKFAEEDKKLKERIDTRNELESYA R M V K K L 2 0 1 2 0 0 3 0 0 0 0 3 1 1 0 0 0 0 0 1 0 0 14 2 1652.7716 P11021 P11021 541 554 HSPA5 78 kDa glucose-regulated protein yes yes 3;4 0.0033032 110.55 By MS/MS By matching 5 0 6 4 2 11171000 11125000 45377 10299 545 10754;10755 25661;25662;25663;25664;25665;25666 18133;18134;18135;18136 18133 333 4 457290 134270 MVNHFIAEFK TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK DFDNRMVNHFIAEFKRKHKKDISENKRAVR R M V F K R 1 0 1 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 1 0 0 10 0 1234.6169 P11142 P11142 237 246 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.00024755 154.85 By MS/MS By matching 6.08 1.11 5 3 2 2 11 1 43396000 43377000 19172 10300 546 10756;10757 25667;25668;25669;25670;25671;25672;25673;25674;25675;25676;25677;25678 18137;18138;18139;18140 18139 336 4 1642800 56729 MVNLESMHTDIK ______________________________ ______________________________ - M V I K M 0 0 1 1 0 0 1 0 1 1 1 1 2 0 0 1 1 0 0 1 0 0 12 0 1416.6741 Q9UKI9 Q9UKI9 1 12 POU2F3 POU domain, class 2, transcription factor 3 yes yes 2 0.037229 51.436 By MS/MS 6.5 0.5 1 1 2 1081300 1081300 0 10301 2812 10758 25679;25680 18141 18141 1629;1630 0 10473 0 MVNPTTVLESPHSLPAK GTGEFLDAWLMLVEKMVNPTTVLESPHSLP NPTTVLESPHSLPAKLPGGVQNFPQFSALR K M V A K L 1 0 1 0 0 0 1 0 1 0 2 1 1 0 3 2 2 0 0 2 0 0 17 0 1819.9502 Q7Z6Z7 Q7Z6Z7 1209 1225 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.0288 65.265 By MS/MS 1.5 0.5 1 1 2 462630 462630 0 10302 1803 10759 25681;25682 18142 18142 1265 1 22739 0 MVNSNLASVEELK EVRSKSDPIMLLKDRMVNSNLASVEELKEI DRMVNSNLASVEELKEIDVEVRKEIEDAAQ R M V L K E 1 0 2 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 0 2 0 0 13 0 1432.7232 P08559 P08559 324 336 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 8.9386E-26 246.26 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 5515800 5474300 41487 10303 504 10760 25683;25684;25685 18143;18144 18144 304 2 157230 170310 MVNSNLASVEELKEIDVEVR EVRSKSDPIMLLKDRMVNSNLASVEELKEI LASVEELKEIDVEVRKEIEDAAQFATADPE R M V V R K 1 1 2 1 0 0 4 0 0 1 2 1 1 0 0 2 0 0 0 4 0 0 20 1 2273.1573 P08559 P08559 324 343 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 3 0.0066616 68.525 By MS/MS 7.5 0.5 1 1 2 582430 582430 0 10304 504 10761 25686;25687 18145 18145 304 1 17821 0 MVPFQVPEILR SGFAYHLFPRSRLEKMVPFQVPEILRTPLE RLEKMVPFQVPEILRTPLENLVLQAKIHMP K M V L R T 0 1 0 0 0 1 1 0 0 1 1 0 1 1 2 0 0 0 0 2 0 0 11 0 1327.7322 Q7L2E3 Q7L2E3 803 813 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.015243 87.298 By MS/MS 4 0.816 1 1 1 3 2860900 2860900 0 10305 1763 10762 25688;25689;25690 18146;18147 18147 1247 2 77163 0 MVPPVQVSPLIK ______________________________ ______________________________ - M V I K L 0 0 0 0 0 1 0 0 0 1 1 1 1 0 3 1 0 0 0 3 0 0 12 0 1306.7683 P56385 P56385 1 12 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.0032835 107.15 By MS/MS 10 0 2 2 1929100 1929100 0 10306 1046 10763 25691;25692 18148;18149;18150 18148 813 3 2050500 0 MVQEAEKYK ITNDKGRLSKEDIERMVQEAEKYKAEDEKQ KEDIERMVQEAEKYKAEDEKQRDKVSSKNS R M V Y K A 1 0 0 0 0 1 2 0 0 0 0 2 1 0 0 0 0 0 1 1 0 0 9 1 1124.5536 P11142;P0DMV9;P0DMV8 P11142 518 526 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 3 0.041823 60.019 By MS/MS 5 0 1 1 0 0 0 10307 546;528 10764 25693 18151 18151 317;337 1 0 0 MVQEAEKYKAEDEK ITNDKGRLSKEDIERMVQEAEKYKAEDEKQ RMVQEAEKYKAEDEKQRDKVSSKNSLESYA R M V E K Q 2 0 0 1 0 1 4 0 0 0 0 3 1 0 0 0 0 0 1 1 0 0 14 2 1696.7978 P11142 P11142 518 531 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 1.0428E-05 135.94 By MS/MS By matching 5 0 4 3 1 4648900 4604700 44252 10308 546 10765;10766 25694;25695;25696;25697 18152;18153;18154 18154 337 3 189270 130940 MVQEAEKYKAEDEVQR ITNDKGRLSKEEIERMVQEAEKYKAEDEVQ VQEAEKYKAEDEVQRERVSAKNALESYAFN R M V Q R E 2 1 0 1 0 2 4 0 0 0 0 2 1 0 0 0 0 0 1 2 0 0 16 2 1951.9309 P0DMV9;P0DMV8 P0DMV9 518 533 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3;4 0.0013794 139.34 By MS/MS By matching 5 0 5 3 2 14894000 14829000 65126 10309 528 10767;10768 25698;25699;25700;25701;25702 18155;18156;18157 18156 317 3 609540 192710 MVQFEENGR RWSSLACNIALDAVKMVQFEENGRKEIDIK ALDAVKMVQFEENGRKEIDIKKYARVEKIP K M V G R K 0 1 1 0 0 1 2 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 9 0 1108.4971 P49368 P49368 182 190 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.017419 93.649 By MS/MS 7 0.816 1 1 1 3 2572700 2572700 0 10310 916 10769 25703;25704;25705 18158 18158 679 1 34653 0 MVQFEENGRK RWSSLACNIALDAVKMVQFEENGRKEIDIK LDAVKMVQFEENGRKEIDIKKYARVEKIPG K M V R K E 0 1 1 0 0 1 2 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 10 1 1236.5921 P49368 P49368 182 191 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.0035883 126.24 By MS/MS 6 0.707 1 2 1 4 11468000 11468000 0 10311 916 10770;10771 25706;25707;25708;25709 18159;18160 18159 679 2 126400 0 MVQQCCTYVEEITDLPIKLR LLSKRRSQLKQAVAKMVQQCCTYVEEITDL CTYVEEITDLPIKLRLIDTLRMVTEGKIYV K M V L R L 0 1 0 1 2 2 2 0 0 2 2 1 1 0 1 0 2 0 1 2 0 0 20 1 2495.2222 O00232 O00232 104 123 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 0.029446 56.081 By MS/MS 6 0 1 1 1443800 1443800 0 10312 81 10772 25710 18161 18161 48 1 11259 0 MVSADAYK TLARVIVDKYRDGTKMVSADAYKITPGARG KYRDGTKMVSADAYKITPGARGAFSEEYKR K M V Y K I 2 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 8 0 883.41095 P09543 P09543 80 87 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.042067 86.833 By MS/MS 7 0 1 1 1962300 1962300 0 10313 516 10773 25711 18162 18162 1 35067 0 MVSAVLNGMLDQSFR LAVLELMQSSVDNTKMVSAVLNGMLDQSFR MVSAVLNGMLDQSFRERANQKHQGLKLATT K M V F R E 1 1 1 1 0 1 0 1 0 0 2 0 2 1 0 2 0 0 0 2 0 0 15 0 1666.8171 P78527 P78527 1592 1606 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.7665E-17 167.73 By MS/MS 2 0 1 1 290130 290130 0 10314 1197 10774 25712 18163 18163 968;969 0 14421 0 MVSGMYLGELVR IDRGSLNPGKQLFEKMVSGMYLGELVRLIL FEKMVSGMYLGELVRLILVKMAKEGLLFEG K M V V R L 0 1 0 0 0 0 1 2 0 0 2 0 2 0 0 1 0 0 1 2 0 0 12 0 1353.6785 P19367 P19367 296 307 HK1 Hexokinase-1 yes yes 2 0.00048719 121.61 By MS/MS 4.33 0.471 2 1 3 1937600 1937600 0 10315 630 10775;10776 25713;25714;25715 18164;18165 18164 425;426 2 53592 0 MVSVLPIFR DTNNHQIKVMDLETKMVSVLPIFRSENAVV MDLETKMVSVLPIFRSENAVVDGPFLVEKQ K M V F R S 0 1 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 2 0 0 9 0 1060.6103 Q8NBF2 Q8NBF2 565 573 NHLRC2 NHL repeat-containing protein 2 yes yes 2 0.0023385 119.17 By MS/MS 5 0 1 1 123370 123370 0 10316 1940 10777 25716 18166 18166 1297 1 5071 0 MVTGDNINTAR PDAIKKCQRAGITVRMVTGDNINTARAIAT ITVRMVTGDNINTARAIATKCGILHPGEDF R M V A R A 1 1 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 0 11 0 1190.5714 P20020;P23634;Q16720;Q01814 P20020 706 716 ATP2B1;ATP2B4;ATP2B3;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 4;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 2 yes no 2 8.082E-05 162.36 By MS/MS 1.8 0.748 2 2 1 5 1221700 1221700 0 10317 637 10778;10779 25717;25718;25719;25720;25721 18167;18168;18169;18170;18171 18167 429 5 56318 0 MVVDAVMMLDDLLQLK LSSKLISQQKAFFAKMVVDAVMMLDDLLQL VVDAVMMLDDLLQLKMIGIKKVQGGALEDS K M V L K M 1 0 0 3 0 1 0 0 0 0 4 1 3 0 0 0 0 0 0 3 0 0 16 0 1832.945 Q99832 Q99832 178 193 CCT7 T-complex protein 1 subunit eta yes yes 2;3 1.7601E-29 240.65 By MS/MS 6 0 5 5 13502000 13502000 0 10318 2295 10780;10781;10782 25722;25723;25724;25725;25726 18172;18173;18174;18175;18176;18177;18178;18179;18180;18181;18182 18172 1443;1444;1445 11 105290 0 MVVESAYEVIK MGTDNDSENWKEVHKMVVESAYEVIKLKGY EVHKMVVESAYEVIKLKGYTNWAIGLSVAD K M V I K L 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 1 3 0 0 11 0 1266.653 P07195 P07195 234 244 LDHB L-lactate dehydrogenase B chain yes yes 2 6.8849E-08 193.82 By MS/MS 8.4 1.02 1 2 1 1 5 11207000 11207000 0 10319 486 10783;10784 25727;25728;25729;25730;25731 18183;18184 18183 276 2 867150 0 MVVLSLPR EECRYKLYQEMFAWKMVVLSLPRIQSQRYQ QEMFAWKMVVLSLPRIQSQRYQVGVHYELT K M V P R I 0 1 0 0 0 0 0 0 0 0 2 0 1 0 1 1 0 0 0 2 0 0 8 0 913.54191 Q14204 Q14204 991 998 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0052523 127.12 By MS/MS 1.5 0.5 1 1 2 1254400 1254400 0 10320 1421 10785 25732;25733 18185;18186 18186 1110 2 61469 0 MVVPGLDGAQIPR LVQALQTKVTQQGLKMVVPGLDGAQIPRDP LKMVVPGLDGAQIPRDPSQQELPRLLSAAC K M V P R D 1 1 0 1 0 1 0 2 0 1 1 0 1 0 2 0 0 0 0 2 0 0 13 0 1351.7282 P49327 P49327 1159 1171 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00023303 140.78 By MS/MS By matching 2.55 0.988 2 3 4 2 10 1 27113000 27068000 45257 10321 915 10786;10787 25734;25735;25736;25737;25738;25739;25740;25741;25742;25743;25744 18187;18188;18189;18190;18191;18192;18193;18194;18195;18196 18193 662 10 1131300 64863 MVVPVAALFTPLK FSWNVWPSSRLEATRMVVPVAALFTPLKER TRMVVPVAALFTPLKERPDLPPIQYEPVLC R M V L K E 2 0 0 0 0 0 0 0 0 0 2 1 1 1 2 0 1 0 0 3 0 0 13 0 1384.8152 Q15436 Q15436 34 46 SEC23A Protein transport protein Sec23A yes yes 2 0.0049514 99.013 By MS/MS 5 0 1 1 123270 123270 0 10322 1502 10788 25745 18197 18197 1159 1 5066.7 0 MVVSIAEDLLR GVHQCPLGIPHAKGKMVVSIAEDLLRTAAQ AKGKMVVSIAEDLLRTAAQNSRLSLQRTQA K M V L R T 1 1 0 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 0 2 0 0 11 0 1244.6799 Q9P2D3 Q9P2D3 529 539 HEATR5B HEAT repeat-containing protein 5B yes yes 2 0.011989 91.584 By MS/MS 2.5 0.5 1 1 2 221970 221970 0 10323 2736 10789 25746;25747 18198 18198 1593 1 9080.1 0 MWFQWSEQR ARLCLISTFLEDGIRMWFQWSEQRDYIDTT LEDGIRMWFQWSEQRDYIDTTWNCGYLLAS R M W Q R D 0 1 0 0 0 2 1 0 0 0 0 0 1 1 0 1 0 2 0 0 0 0 9 0 1296.571 O15260 O15260 44 52 SURF4 Surfeit locus protein 4 yes yes 2 0.00098858 135.79 By MS/MS 1 0 1 1 79322 79322 0 10324 164 10790 25748 18199 18199 99 1 3875.5 0 MWQSMCPLR LTDKTLNLCKMIDKRMWQSMCPLRQFRKLP KMIDKRMWQSMCPLRQFRKLPEEVVKKIEK R M W L R Q 0 1 0 0 1 1 0 0 0 0 1 0 2 0 1 1 0 1 0 0 0 0 9 0 1207.53 O75643 O75643 1122 1130 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.00060833 124.08 By MS/MS 1.5 0.5 1 1 2 258270 258270 0 10325 322 10791 25749;25750 18200 18200 179;180 1 12695 0 MYAALGDPK KTPVNKKNIEKMYERMYAALGDPKAPGLGA EKMYERMYAALGDPKAPGLGAFRRKFIQTF R M Y P K A 2 0 0 1 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 9 0 964.4688 P78527 P78527 3613 3621 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0013514 136.8 By MS/MS 1.5 0.5 1 1 2 1309900 1309900 0 10326 1197 10792 25751;25752 18201;18202 18202 2 64376 0 MYAPGGAGLPGGR ______________________________ ______________________________ - M Y G R R 2 1 0 0 0 0 0 5 0 0 1 0 1 0 2 0 0 0 1 0 0 0 13 0 1202.5866 O75204 O75204 1 13 TMEM127 Transmembrane protein 127 yes yes 2 0.024413 62.582 By MS/MS 1 0 1 1 169810 169810 0 10327 292 10793 25753 18203 18203 161 1 8296.7 0 MYKEEGLK TQPGYANTLRDAAPKMYKEEGLKAFYKGVA LRDAAPKMYKEEGLKAFYKGVAPLWMRQIP K M Y L K A 0 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 1 0 0 0 8 1 996.49502 Q00325 Q00325 207 214 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2;3 0.023129 148.99 By MS/MS 1.5 0.5 2 2 4 4274000 4274000 0 10328 1230 10794 25754;25755;25756;25757 18204;18205;18206 18205 3 209780 0 MYKEEGLKAFYK TQPGYANTLRDAAPKMYKEEGLKAFYKGVA APKMYKEEGLKAFYKGVAPLWMRQIPYTMM K M Y Y K G 1 0 0 0 0 0 2 1 0 0 1 3 1 1 0 0 0 0 2 0 0 0 12 2 1505.7588 Q00325 Q00325 207 218 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 3 0.001512 126.66 By MS/MS 1 0 1 1 395480 395480 0 10329 1230 10795 25758 18207 18207 1003 1 19322 0 MYLQVETR ______________________________ ______________________________ - M Y T R T 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 8 0 1038.5168 Q9BQA9 Q9BQA9 1 8 C17orf62 Uncharacterized protein C17orf62 yes yes 2 0.012441 109.11 By MS/MS 9 0 1 1 720860 720860 0 10330 2310 10796 25759 18208 18208 1458 1 413700 0 MYSDAFLNDSYLK EIRAICIEEIGIWMKMYSDAFLNDSYLKYV MKMYSDAFLNDSYLKYVGWTMHDKQGEVRL K M Y L K Y 1 0 1 2 0 0 0 0 0 0 2 1 1 1 0 2 0 0 2 0 0 0 13 0 1565.7072 Q8N3U4;Q8WVM7 Q8N3U4 318 330 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 yes no 2 0.036062 93.839 By MS/MS 3 0 1 1 0 0 0 10331 1911 10797 25760 18209 18209 1296 1 0 0 MYSTDDGVQFHAFGR SDCDPDGPLMCHTTKMYSTDDGVQFHAFGR MYSTDDGVQFHAFGRVLSGTIHAGQPVKVL K M Y G R V 1 1 0 2 0 1 0 2 1 0 0 0 1 2 0 1 1 0 1 1 0 0 15 0 1729.7519 Q15029 Q15029 481 495 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 3 0.018994 76.357 By MS/MS 3.5 0.5 1 1 2 1680500 1680500 0 10332 1466 10798 25761;25762 18210 18210 1147 1 45727 0 NAAANDKLK LRRDLRIKSQELEVKNAAANDKLKKMVKDQ QELEVKNAAANDKLKKMVKDQQEAEKKKVM K N A L K K 3 0 2 1 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 943.50869 Q14204 Q14204 3233 3241 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0029595 155.58 By MS/MS 2 0.816 1 1 1 3 603360 603360 0 10333 1421 10799 25763;25764;25765 18211 18211 1 27693 0 NAAAQGSPEATLR RPPLYLERILFVLLRNAAAQGSPEATLRLA LRNAAAQGSPEATLRLAQPLHACLVQCSRE R N A L R L 4 1 1 0 0 1 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 13 0 1284.6422 Q14674 Q14674 107 119 ESPL1 Separin yes yes 2 1.0269E-11 202.31 By MS/MS 2.5 0.5 1 1 2 503620 503620 0 10334 1439 10800 25766;25767 18212 18212 1 19281 0 NAAENMLEILGFK HTAEGTGTNKKVAKRNAAENMLEILGFKVP KRNAAENMLEILGFKVPQAQPTKPALKSEE R N A F K V 2 0 2 0 0 0 2 1 0 1 2 1 1 1 0 0 0 0 0 0 0 0 13 0 1448.7334 O95793 O95793 343 355 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2 2.141E-05 168.98 By MS/MS 6 0 1 1 196820 196820 0 10335 406 10801 25768 18213 18213 1 1534.8 0 NAAGALDLLK VVRFAKKMDKMVQKKNAAGALDLLKELKNI MVQKKNAAGALDLLKELKNIPMTLELLQST K N A L K E 3 0 1 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 984.5604 P23193 P23193 20 29 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0026897 134.23 By MS/MS 7 0 1 1 1520300 1520300 0 10336 664 10802 25769 18214 18214 1 27168 0 NAAPCAVSYLLFDQNDK YHYLQFAYYKLNDLKNAAPCAVSYLLFDQN APCAVSYLLFDQNDKVMQQNLVYYQYHRDT K N A D K V 3 0 2 2 1 1 0 0 0 0 2 1 0 1 1 1 0 0 1 1 0 0 17 0 1924.8989 O75718 O75718 313 329 CRTAP Cartilage-associated protein yes yes 2 0.0044304 107.11 By MS/MS 7 0 1 1 273300 273300 0 10337 326 10803 25770 18215 18215 1 4883.9 0 NAAQVLVGIPLETGQK RQHLASIYEKEEDWRNAAQVLVGIPLETGQ AAQVLVGIPLETGQKQYNVDYKLETYLKIA R N A Q K Q 2 0 1 0 0 2 1 2 0 1 2 1 0 0 1 0 1 0 0 2 0 0 16 0 1636.9148 Q9BT78 Q9BT78 122 137 COPS4 COP9 signalosome complex subunit 4 yes yes 2 3.523E-21 227.57 By MS/MS 7 0 1 1 3427300 3427300 0 10338 2347 10804 25771 18216 18216 1 61247 0 NACDLFIPLDK RVLRGHPPLLLDVVRNACDLFIPLDKLGLW DVVRNACDLFIPLDKLGLWRCGPGIVGLCG R N A D K L 1 0 1 2 1 0 0 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 11 0 1304.6435 O96011 O96011 214 224 PEX11B Peroxisomal membrane protein 11B yes yes 2 0.0052655 106.62 By MS/MS 8.5 0.5 1 1 2 385990 385990 0 10339 421 10805 25772;25773 18217;18218 18218 2 104720 0 NACGSGYDFDVFVVR QVAIREAYEAGLIGKNACGSGYDFDVFVVR NACGSGYDFDVFVVRGAGAYICGEETALIE K N A V R G 1 1 1 2 1 0 0 2 0 0 0 0 0 2 0 1 0 0 1 3 0 0 15 0 1704.7566 P49821 P49821 185 199 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 2 9.3936E-06 148.89 By MS/MS 6.5 0.5 1 1 2 567680 567680 0 10340 936 10806 25774;25775 18219 18219 1 5947.9 0 NACIECSVNQNSIR ASSLQLITECFRCLRNACIECSVNQNSIRN RNACIECSVNQNSIRNLDTIGVAVDLILLF R N A I R N 1 1 3 0 2 1 1 0 0 2 0 0 0 0 0 2 0 0 0 1 0 0 14 0 1663.7406 Q9UBB4 Q9UBB4 90 103 ATXN10 Ataxin-10 yes yes 2 3.2964E-59 297.32 By MS/MS 7 0 1 1 2981700 2981700 0 10341 2744 10807 25776 18220 18220 1 53284 0 NADAAFLR TDELPKNDLITYLQKNADAAFLRHWKLTGT LITYLQKNADAAFLRHWKLTGTNKSIRKNR K N A L R H 3 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 876.44537 Q9ULT8 Q9ULT8 1920 1927 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0012344 169.06 By MS/MS 1.5 0.5 1 1 2 585900 585900 0 10342 2826 10808 25777;25778 18221 18221 1 29094 0 NADDDRIPR RGPRRGLDDDRGPWRNADDDRIPRRGAEDD DRGPWRNADDDRIPRRGAEDDRGPWRNMDD R N A P R R 1 2 1 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 9 1 1070.5105 Q14152 Q14152 1122 1130 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.013537 127.46 By MS/MS By matching 3.33 0.471 2 1 2 1 8855100 8702200 152900 10343 1409 10809 25779;25780;25781 18222 18222 1 227280 219140 NADELVK DGTTSVVIIAAELLKNADELVKQKIHPTSV IIAAELLKNADELVKQKIHPTSVISGYRLA K N A V K Q 1 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 787.40758 P17987 P17987 103 109 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.016936 134.81 By MS/MS 2 0.816 1 1 1 3 3000500 3000500 0 10344 619 10810 25782;25783;25784 18223 18223 1 140800 0 NADELVKQK DGTTSVVIIAAELLKNADELVKQKIHPTSV AAELLKNADELVKQKIHPTSVISGYRLACK K N A Q K I 1 0 1 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1043.5611 P17987 P17987 103 111 TCP1 T-complex protein 1 subunit alpha yes yes 2 3.218E-05 180.03 By MS/MS 3 1.87 1 1 1 1 4 8495100 8495100 0 10345 619 10811 25785;25786;25787;25788 18224;18225 18225 2 82959 0 NADETVLQK ESSRSLLICLLWVLKNADETVLQKWFTDLS LLWVLKNADETVLQKWFTDLSVLQLNRLLD K N A Q K W 1 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1016.5138 Q96N67 Q96N67 1338 1346 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0010895 140.11 By MS/MS 3 0.816 1 1 1 3 1018600 1018600 0 10346 2230 10812 25789;25790;25791 18226 18226 1 43085 0 NADGKIISLDAK TFINWGNLNITKIHKNADGKIISLDAKLNL IHKNADGKIISLDAKLNLENKDYKKTTKVT K N A A K L 2 0 1 2 0 0 0 1 0 2 1 2 0 0 0 1 0 0 0 0 0 0 12 1 1243.6772 P07814 P07814 582 593 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.033672 108.35 By MS/MS 3 0 1 1 538850 538850 0 10347 493 10813 25792 18227 18227 1 14067 0 NADGYKLDK FLEYASPAHAVDAVKNADGYKLDKQHTFRV AVDAVKNADGYKLDKQHTFRVNLFTDFDKY K N A D K Q 1 0 1 2 0 0 0 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 9 1 1022.5033 P55884 P55884 249 257 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0068674 143.7 By MS/MS By matching 4 0 2 1 1 3305900 3274700 31181 10348 1040 10814 25793;25794 18228 18228 1 89396 65154 NADLNAQTVVK ESSDFNERRERDEKKNADLNAQTVVKVGEN DEKKNADLNAQTVVKVGENVLPPKREIAKR K N A V K V 2 0 2 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1171.6197 Q9Y520 Q9Y520 1516 1526 PRRC2C Protein PRRC2C yes yes 2 6.6685E-05 166.86 By MS/MS 1.5 0.5 1 1 2 1021700 1021700 0 10349 2963 10815 25795;25796 18229;18230 18229 2 50119 0 NADMSEEMQQDSVECATQALEK ______________________________ MQQDSVECATQALEKYNIEKDIAAHIKKEF K N A E K Y 3 0 1 2 1 3 4 0 0 0 1 1 2 0 0 2 1 0 0 1 0 0 22 0 2513.0356 P63167 P63167 10 31 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 3 2.0021E-08 138.66 By MS/MS 10 0 1 1 276270 276270 0 10350 1171 10816 25797 18231 18231 911;912 1 293640 0 NAEAQQSLCESER WQRDLASCRDWEERRNAEAQQSLCESERAR RRNAEAQQSLCESERARVRAARKHILVWAP R N A E R A 2 1 1 0 1 2 3 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 13 0 1520.6525 Q6P5X5 Q6P5X5 97 109 C22orf39 UPF0545 protein C22orf39 yes yes 2 1.7165E-07 168.82 By MS/MS 10 0 1 1 58753 58753 0 10351 1711 10817 25798 18232 18232 1 62448 0 NAEAVLQSPGLSGK KFKNWDDVLTVDYTRNAEAVLQSPGLSGKV RNAEAVLQSPGLSGKVKRDAEKKDQMKADL R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 0.0027517 113.24 By MS/MS 3 0 1 1 792000 792000 0 10352 1328 10818 25799 18233 18233 0 20675 0 NAEIGNKDIK MQLDFRTPPGFDRTRNAEIGNKDIKFKHLE FDRTRNAEIGNKDIKFKHLEEAFTSEHWLV R N A I K F 1 0 2 1 0 0 1 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 10 1 1100.5826 Q8TCJ2 Q8TCJ2 743 752 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.031563 109.83 By MS/MS 2 0.816 1 1 1 3 699480 699480 0 10353 1995 10819 25800;25801;25802 18234 18234 1 32855 0 NAEKYAEEDRR SSGGLSKDDIENMVKNAEKYAEEDRRKKER NMVKNAEKYAEEDRRKKERVEAVNMAEGII K N A R R K 2 2 1 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 11 2 1379.643 P38646 P38646 564 574 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 0.00022312 172.88 By MS/MS 5.33 0.471 2 1 3 14349000 14349000 0 10354 820 10820 25803;25804;25805 18235;18236 18236 2 560270 0 NAELDPVTTEEQVLDVK AYIQESATFLEDTYRNAELDPVTTEEQVLD ELDPVTTEEQVLDVKGYLSKVRGISEVLAR R N A V K G 1 0 1 2 0 1 3 0 0 0 2 1 0 0 1 0 2 0 0 3 0 0 17 0 1898.9473 O95140 O95140 63 79 MFN2 Mitofusin-2 yes yes 2 2.1152E-14 227.47 By MS/MS 5 0.816 1 1 1 3 2431400 2431400 0 10355 366 10821 25806;25807;25808 18237 18237 1 67624 0 NAELEKDAQNR PEEGLEVWKNWAQTKNAELEKDAQNRLAPI AQTKNAELEKDAQNRLAPIGRRQLLRFQED K N A N R L 2 1 2 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 1 1286.6215 Q2TAL8 Q2TAL8 490 500 QRICH1 Glutamine-rich protein 1 yes yes 2 4.4205E-21 236.92 By MS/MS 4 0 1 1 1032900 1032900 0 10356 1562 10822 25809 18238 18238 1 28198 0 NAENAIEALK LILVANAIVGVWQERNAENAIEALKEYEPE VWQERNAENAIEALKEYEPEMGKVYRQDRK R N A L K E 3 0 2 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 10 0 1071.556 P16615;O14983 P16615 111 120 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 3.2849E-05 173.24 By MS/MS 4.67 3.09 1 1 1 3 4920500 4920500 0 10357 608 10823 25810;25811;25812 18239;18240;18241;18242 18240 4 851020 0 NAENAIEALKEYEPEMGK LILVANAIVGVWQERNAENAIEALKEYEPE NAIEALKEYEPEMGKVYRQDRKSVQRIKAK R N A G K V 3 0 2 0 0 0 5 1 0 1 1 2 1 0 1 0 0 0 1 0 0 0 18 1 2034.9568 P16615;O14983 P16615 111 128 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 3 0.0065405 78.848 By MS/MS 3.5 0.5 1 1 2 990820 990820 0 10358 608 10824 25813;25814 18243 18243 396 1 26524 0 NAEPLINLDVNNPDFK DLVPDNSKTADNATKNAEPLINLDVNNPDF AEPLINLDVNNPDFKAGVMALANLLQIQRH K N A F K A 1 0 4 2 0 0 1 0 0 1 2 1 0 1 2 0 0 0 0 1 0 0 16 0 1811.9054 Q9Y224 Q9Y224 116 131 C14orf166 UPF0568 protein C14orf166 yes yes 2 9.4274E-08 195.87 By MS/MS 8 0 1 1 1546500 1546500 0 10359 2863 10825 25815 18244;18245 18244 2 102020 0 NAEQYKDQADKASTR KKLKDVLLQVDDERRNAEQYKDQADKASTR NAEQYKDQADKASTRLKQLKRQLEEAEEEA R N A T R L 3 1 1 2 0 2 1 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 15 2 1723.8125 P35579 P35579 1857 1871 MYH9 Myosin-9 yes yes 3 0.0095306 86.641 By MS/MS 2 0 1 1 587150 587150 0 10360 793 10826 25816 18246 18246 1 29185 0 NAFYIGSYQQCINEAQR ASGGSGEVDELFDVKNAFYIGSYQQCINEA FYIGSYQQCINEAQRVKLSSPERDVERDVF K N A Q R V 2 1 2 0 1 3 1 1 0 2 0 0 0 1 0 1 0 0 2 0 0 0 17 0 2060.9374 O14579 O14579 24 40 COPE Coatomer subunit epsilon yes yes 2 1.9704E-43 260.97 By MS/MS 8 0 1 1 1894700 1894700 0 10361 115 10827 25817 18247 18247 1 125000 0 NAGAVIGK NTDEMVELRILLQSKNAGAVIGKGGKNIKA RILLQSKNAGAVIGKGGKNIKALRTDYNAS K N A G K G 2 0 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 1 0 0 8 0 728.41809 P61978 P61978 53 60 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 0.05144 90.777 By MS/MS By matching 6 0 2 1 1 2834200 2819900 14316 10362 1110 10828 25818;25819 18248 18248 1 21990 43907 NAGNCLSPAVIVGLLK PKGTIQVITQGTSLKNAGNCLSPAVIVGLL AGNCLSPAVIVGLLKEASKQADVNLVNAKL K N A L K E 2 0 2 0 1 0 0 2 0 1 3 1 0 0 1 1 0 0 0 2 0 0 16 0 1624.8971 O43175 O43175 365 380 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 6.3677E-15 208.08 By MS/MS 6 0 3 3 19177000 19177000 0 10363 185 10829 25820;25821;25822 18249;18250;18251;18252 18250 4 149540 0 NAGVEGSLIVEK IIKRTLKIPAMTIAKNAGVEGSLIVEKIMQ IAKNAGVEGSLIVEKIMQSSSEVGYDAMAG K N A E K I 1 0 1 0 0 0 2 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1214.6507 P10809 P10809 482 493 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 1.3433E-11 211.63 By MS/MS By MS/MS 5.92 2.25 1 1 1 2 3 1 1 1 1 10 2 467480000 465690000 1787400 10364 544 10830 25823;25824;25825;25826;25827;25828;25829;25830;25831;25832;25833;25834 18253;18254;18255;18256;18257;18258;18259;18260;18261 18260 9 7499400 5473900 NAGYYALR VYNEVMSVGQKYGIRNAGYYALRSLRIEKF GQKYGIRNAGYYALRSLRIEKFFAFWGQDI R N A L R S 2 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 8 0 926.46102 Q8NCN5 Q8NCN5 704 711 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 0.0068936 130.04 By MS/MS 4.5 0.5 1 1 2 1083400 1083400 0 10365 1955 10831 25835;25836 18262 18262 1 31554 0 NAIANASTLAEVER KKKGGPSPGDVEAIKNAIANASTLAEVERL KNAIANASTLAEVERLKGLLQSGQIPGRER K N A E R L 4 1 2 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1457.7474 P09661 P09661 206 219 SNRPA1 U2 small nuclear ribonucleoprotein A yes yes 2 9.5483E-06 168.82 By MS/MS 8 0 1 1 1502200 1502200 0 10366 520 10832 25837 18263 18263 1 99103 0 NAIDDGCVVPGAGAVEVAMAEALIK TQIKDAVRDGLRAVKNAIDDGCVVPGAGAV GAGAVEVAMAEALIKHKPSVKGRAQLGVQA K N A I K H 6 0 1 2 1 0 2 3 0 2 1 1 1 0 1 0 0 0 0 4 0 0 25 0 2469.2243 P40227 P40227 400 424 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 1.4021E-08 122.97 By MS/MS 6 0 4 4 51828000 51828000 0 10367 828 10833;10834 25838;25839;25840;25841 18264;18265;18266;18267;18268;18269;18270 18264 576 7 404160 0 NAIIIQSFIR QEERRKREEERRRLKNAIIIQSFIRGYRDR RRRLKNAIIIQSFIRGYRDRKQQYSIQRSA K N A I R G 1 1 1 0 0 1 0 0 0 4 0 0 0 1 0 1 0 0 0 0 0 0 10 0 1173.687 Q15386 Q15386 48 57 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.047539 96.034 By MS/MS 4 0 1 1 181340 181340 0 10368 1494 10835 25842 18271 18271 0 4950.4 0 NAIINCLDEDR EKVLMQELVTLIEQRNAIINCLDEDRQREE IEQRNAIINCLDEDRQREEEEDKMLEAMIK R N A D R Q 1 1 2 2 1 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1331.614 Q8N3F8 Q8N3F8 796 806 MICALL1 MICAL-like protein 1 yes yes 2 0.0019861 120.45 By MS/MS 3 0 1 1 331790 331790 0 10369 1909 10836 25843 18272 18272 1 8661.4 0 NAILEELPR KTMAAGDPANLRNARNAILEELPRTVNTMA NLRNARNAILEELPRTVNTMALLWNVLRKE R N A P R T 1 1 1 0 0 0 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 9 0 1053.5819 Q9Y3R5 Q9Y3R5 1618 1626 DOPEY2 Protein dopey-2 yes yes 2 0.0086778 107.69 By MS/MS 2.5 0.5 1 1 2 237460 237460 0 10370 2942 10837 25844;25845 18273 18273 1 10143 0 NAIMAIR EEVHVSSNADEEDIRNAIMAIRRNRVALKG NADEEDIRNAIMAIRRNRVALKGNIETNHN R N A I R R 2 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 7 0 787.43744 P51553 P51553 102 108 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 2 0.04884 118.69 By MS/MS 7 0 1 1 0 0 0 10371 966 10838 25846 18274 18274 1 0 0 NAIQEIQR TMDEKYVNSIWDLLKNAIQEIQRKNNSGLS SIWDLLKNAIQEIQRKNNSGLSFEELYRNA K N A Q R K 1 1 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 8 0 970.51959 Q13618 Q13618 39 46 CUL3 Cullin-3 yes yes 2 0.03941 95.502 By MS/MS 4 0 1 1 513340 513340 0 10372 1389 10839 25847 18275 18275 1 14014 0 NAIVVLIPK KGIVSEEAYILFVRKNAIVVLIPKYGLEGT ILFVRKNAIVVLIPKYGLEGTVFFEEKDKP K N A P K Y 1 0 1 0 0 0 0 0 0 2 1 1 0 0 1 0 0 0 0 2 0 0 9 0 965.62735 Q9Y2L1 Q9Y2L1 858 866 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.0021118 128.61 By MS/MS 3.5 0.5 1 1 2 1688800 1688800 0 10373 2892 10840 25848;25849 18276 18276 1 45971 0 NALANPLYCPDYR PQTHVIENLHAAAYRNALANPLYCPDYRIG YRNALANPLYCPDYRIGKVTSEELHYFVQN R N A Y R I 2 1 2 1 1 0 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 0 13 0 1565.7297 P22695 P22695 184 196 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 0.0003168 142.19 By MS/MS 7.5 0.5 1 1 2 24049000 24049000 0 10374 662 10841 25850;25851 18277 18277 1 443380 0 NALDLLLPK TSCYVGDNTDLIILRNALDLLLPKLARVIS DLIILRNALDLLLPKLARVISRLADFAKER R N A P K L 1 0 1 1 0 0 0 0 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 995.60153 P30566 P30566 126 134 ADSL Adenylosuccinate lyase yes yes 2 0.00079241 146.79 By MS/MS By matching 3.33 2.36 2 1 1 1 1 5 1 2860200 2756300 103940 10375 744 10842 25852;25853;25854;25855;25856;25857 18278;18279 18278 2 34393 103940 NALESYAFNMK YKAEDEVQRERVSAKNALESYAFNMKSAVE VSAKNALESYAFNMKSAVEDEGLKGKISEA K N A M K S 2 0 2 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 0 0 11 0 1286.5965 P0DMV9;P0DMV8 P0DMV9 540 550 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 2.3202E-38 280.96 By MS/MS By MS/MS 5.4 0.49 3 2 4 1 21534000 21369000 165300 10376 528 10843;10844 25858;25859;25860;25861;25862 18280;18281;18282 18282 318 3 823070 489130 NALGPGLSPELGPLPALR LAQGLPQLHSLVLRRNALGPGLSPELGPLP GPGLSPELGPLPALRVLDLSGNALEALPPG R N A L R V 2 1 1 0 0 0 1 3 0 0 5 0 0 0 4 1 0 0 0 0 0 0 18 0 1770.9992 Q8N1G4 Q8N1G4 85 102 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 4.8399E-07 148.89 By MS/MS 5 0 1 1 301830 301830 0 10377 1901 10845 25863 18283 18283 1 12406 0 NALLLLPEEQQDPK AIPVASMEFAAICLRNALLLLPEEQQDPKQ RNALLLLPEEQQDPKQENGAKNSNQLGGNT R N A P K Q 1 0 1 1 0 2 2 0 0 0 4 1 0 0 2 0 0 0 0 0 0 0 14 0 1606.8566 Q9H9A5 Q9H9A5 467 480 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 2 0.0042807 107.06 By MS/MS 5 0 1 1 410170 410170 0 10378 2531 10846 25864 18284 18284 1 16860 0 NALLQLTDSQIADVAR VESVFDIMEMEDEERNALLQLTDSQIADVA ALLQLTDSQIADVARFCNRYPNIELSYEVV R N A A R F 3 1 1 2 0 2 0 0 0 1 3 0 0 0 0 1 1 0 0 1 0 0 16 0 1726.9214 O75643 O75643 1994 2009 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.3013E-14 201.48 By MS/MS 2 0 1 1 157900 157900 0 10379 322 10847 25865 18285;18286 18286 2 7848.4 0 NALNIGMVEEVLQSSDETK QALKVLSGALKLDSKNALNIGMVEEVLQSS IGMVEEVLQSSDETKSLEEAQEWLKQFIQG K N A T K S 1 0 2 1 0 1 3 1 0 1 2 1 1 0 0 2 1 0 0 2 0 0 19 0 2076.0045 Q9NTX5 Q9NTX5 222 240 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 2.1904E-19 199.37 By MS/MS 8 0 1 1 296410 296410 0 10380 2633 10848 25866 18287 18287 1558 1 19554 0 NALNVLQR FQEVLGRKDKADSTRNALNVLQRFKFLFNL DKADSTRNALNVLQRFKFLFNLPLNIERNI R N A Q R F 1 1 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 926.52976 Q96KP1 Q96KP1 272 279 EXOC2 Exocyst complex component 2 yes yes 2 0.0058171 134.06 By MS/MS 4.5 0.5 1 1 2 1253700 1253700 0 10381 2221 10849 25867;25868 18288 18288 1 37258 0 NALQQENHIIDGVK RGLGWVQFSSEEGLRNALQQENHIIDGVKV RNALQQENHIIDGVKVQVHTRRPKLPQTSD R N A V K V 1 0 2 1 0 2 1 1 1 2 1 1 0 0 0 0 0 0 0 1 0 0 14 0 1577.8162 Q9GZT3 Q9GZT3 75 88 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 1.8971E-18 228.93 By MS/MS By MS/MS 10 0 3 2 1 9014500 8946500 67991 10382 2443 10850 25869;25870;25871 18289;18290;18291;18292 18292 4 9509200 1743900 NALSSLWGK EYLYFFRVLVPATDRNALSSLWGKLASEIL VPATDRNALSSLWGKLASEILMQNWDAAME R N A G K L 1 0 1 0 0 0 0 1 0 0 2 1 0 0 0 2 0 1 0 0 0 0 9 0 974.51853 P60228 P60228 164 172 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 3.9385E-06 181.55 By MS/MS 7 0.816 1 1 1 3 17398000 17398000 0 10383 1065 10851 25872;25873;25874 18293;18294 18293 2 154160 0 NALVSHLDGTTPVCEDIGR SATESEVARGKNILRNALVSHLDGTTPVCE SHLDGTTPVCEDIGRSLLTYGRRIPLAEWE R N A G R S 1 1 1 2 1 0 1 2 1 1 2 0 0 0 1 1 2 0 0 2 0 0 19 0 2052.9899 P31930 P31930 397 415 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2;3 1.0381E-11 210.9 By MS/MS 6.5 0.5 2 2 4 10447000 10447000 0 10384 756 10852 25875;25876;25877;25878 18295;18296;18297 18297 3 132180 0 NAMYTSQQSVENK HLVEKSLQRIQNGQRNAMYTSQQSVENKVG QRNAMYTSQQSVENKVGGIPGWQALLTAVG R N A N K V 1 0 2 0 0 2 1 0 0 0 0 1 1 0 0 2 1 0 1 1 0 0 13 0 1498.6722 Q96AY4 Q96AY4 1762 1774 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.0089261 96.756 By MS/MS 2 0 1 1 110620 110620 0 10385 2125 10853 25879 18298 18298 1 5498.3 0 NAPAIIFIDELDAIAPK ESESNLRKAFEEAEKNAPAIIFIDELDAIA PAIIFIDELDAIAPKREKTHGEVERRIVSQ K N A P K R 4 0 1 2 0 0 1 0 0 4 1 1 0 1 2 0 0 0 0 0 0 0 17 0 1809.9877 P55072 P55072 296 312 VCP Transitional endoplasmic reticulum ATPase yes yes 2 7.106E-07 150.12 By MS/MS 5 1 1 1 2 278700 278700 0 10386 1026 10854 25880;25881 18299;18300;18301 18300 3 3647.7 0 NAPCILFIDEIDAVGR VGPARVRDLFALARKNAPCILFIDEIDAVG APCILFIDEIDAVGRKRGRGNFGGQSEQEN K N A G R K 2 1 1 2 1 0 1 1 0 3 1 0 0 1 1 0 0 0 0 1 0 0 16 0 1801.9033 Q9Y4W6 Q9Y4W6 399 414 AFG3L2 AFG3-like protein 2 yes yes 2 0.035909 71.976 By MS/MS 6 0 1 1 499530 499530 0 10387 2960 10855 25882 18302 18302 1 3895.3 0 NAPPFLEDPSQLPPK GVGILLTRYTAQQFRNAPPFLEDPSQLPPK NAPPFLEDPSQLPPKDGTPAPGYPSYQQYH R N A P K D 1 0 1 1 0 1 1 0 0 0 2 1 0 1 5 1 0 0 0 0 0 0 15 0 1648.8461 O60830 O60830 143 157 TIMM17B Mitochondrial import inner membrane translocase subunit Tim17-B yes yes 2 0.013222 92.925 By MS/MS 9.5 0.5 1 1 2 863000 863000 0 10388 269 10856 25883;25884 18303 18303 1 540190 0 NAPVTFIVDGAVVK CAKCGLPLFYQSQPKNAPVTFIVDGAVVKF KNAPVTFIVDGAVVKFGQGFGKTNIYTQKQ K N A V K F 2 0 1 1 0 0 0 1 0 1 0 1 0 1 1 0 1 0 0 4 0 0 14 0 1428.7977 Q9H5V9 Q9H5V9 108 121 CXorf56 UPF0428 protein CXorf56 yes yes 2 1.1758E-08 193.28 By MS/MS 8 0 1 1 1300100 1300100 0 10389 2506 10857 25885 18304 18304 1 85769 0 NAQAIEDMVGYAQETQHEK EAAGLALGLVMLGSKNAQAIEDMVGYAQET IEDMVGYAQETQHEKILRGLAVGIALVMYG K N A E K I 3 0 1 1 0 3 3 1 1 1 0 1 1 0 0 0 1 0 1 1 0 0 19 0 2160.9746 Q99460 Q99460 525 543 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.051823 53.779 By MS/MS 4 0.816 1 1 1 3 5300500 5300500 0 10390 2268 10858 25886;25887;25888 18305 18305 1 147760 0 NAQEALQAIETK LIVSWSKLIKNGDIKNAQEALQAIETKVAL DIKNAQEALQAIETKVALMLQLLIHEDDDI K N A T K V 3 0 1 0 0 2 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 12 0 1314.6779 O43592 O43592 317 328 XPOT Exportin-T yes yes 2 0.0025079 123.26 By MS/MS 4 0 1 1 4470000 4470000 0 10391 208 10859 25889 18306 18306 1 122030 0 NAQLELKK VYQTEKTKEHKQLLKNAQLELKKSKRKDYY EHKQLLKNAQLELKKSKRKDYYKILGVDKN K N A K K S 1 0 1 0 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 1 942.54983 Q99615 Q99615 369 376 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 0.04028 85.265 By MS/MS 6 0 1 1 867360 867360 0 10392 2276 10860 25890 18307 18307 1 6763.7 0 NAQMAQSPILLLGGAASTLLQNR VTAGPGLTNTVTAVKNAQMAQSPILLLGGA ILLLGGAASTLLQNRGALQAVDQLSLFRPL K N A N R G 4 1 2 0 0 3 0 2 0 1 5 0 1 0 1 2 1 0 0 0 0 0 23 0 2366.274 A1L0T0 A1L0T0 135 157 ILVBL Acetolactate synthase-like protein yes yes 2;3 4.6311E-06 109.44 By MS/MS 6 0 2 2 747500 747500 0 10393 8 10861 25891;25892 18308;18309;18310 18308 1 3 5829 0 NAQNPSLHHPR GELYQWKWSESEPYRNAQNPSLHHPRATFL EPYRNAQNPSLHHPRATFLGLTNEKIVLLS R N A P R A 1 1 2 0 0 1 0 0 2 0 1 0 0 0 2 1 0 0 0 0 0 0 11 0 1269.6327 O95071 O95071 403 413 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.007629 98.044 By MS/MS 1 0 1 1 0 0 0 10394 364 10862 25893 18311 18311 1 0 0 NAQSNALQER HSGRGAGAESSHPVRNAQSNALQEREDDRV SHPVRNAQSNALQEREDDRVGLVRGEKARK R N A E R E 2 1 2 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1129.5476 P11717 P11717 2437 2446 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.00093798 125.74 By MS/MS 1.5 0.5 1 1 2 459480 459480 0 10395 557 10863 25894;25895 18312 18312 1 22759 0 NASDMPETITSR IFFGALRSVRCARGKNASDMPETITSRDAA RGKNASDMPETITSRDAARFPIIASCTLLG K N A S R D 1 1 1 1 0 0 1 0 0 1 0 0 1 0 1 2 2 0 0 0 0 0 12 0 1320.598 Q8TCT9 Q8TCT9 62 73 HM13 Minor histocompatibility antigen H13 yes yes 2 8.5142E-09 186.74 By MS/MS 1.5 0.5 2 2 4 929140 929140 0 10396 1997 10864;10865 25896;25897;25898;25899 18313;18314;18315 18314 1313 3 45470 0 NASELFPAVVK LDAMKRIVGMIAKGKNASELFPAVVKNVAS AKGKNASELFPAVVKNVASKNIEIKKLVYV K N A V K N 2 0 1 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 11 0 1173.6394 O00203 O00203 75 85 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0027596 117.14 By MS/MS 4 0 1 1 350850 350850 0 10397 77 10866 25900 18316 18316 1 9577.7 0 NASEMIDKLTLTFNR SEQSARMTAMDNASKNASEMIDKLTLTFNR NASEMIDKLTLTFNRTRQAVITKELIEIIS K N A N R T 1 1 2 1 0 0 1 0 0 1 2 1 1 1 0 1 2 0 0 0 0 0 15 1 1751.8876 P36542 P36542 263 277 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 3 0.0042136 94.717 By MS/MS 8.5 0.5 1 1 2 2265900 2265900 0 10398 805 10867 25901;25902 18317;18318 18318 552 2 399230 0 NASEVTMLK N A L K 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 1 0 0 1 0 0 9 0 991.50083 REV__Q86TU7 yes yes 2 0.02269 89.296 By MS/MS 7 0 2 2 2527500 2527500 0 + 10399 3036 10868 25903;25904 18319 18319 1749 1 45167 0 NASNDIVR NHGGDIIDYLLNQLKNASNDIVRHGGSLGL YLLNQLKNASNDIVRHGGSLGLGLAAMGTA K N A V R H 1 1 2 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 8 0 887.44609 Q99460 Q99460 467 474 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.017898 109.48 By MS/MS 4 0 1 1 3644500 3644500 0 10400 2268 10869 25905 18320 18320 1 99492 0 NASQKEIKK PLAKEDYYQILGVPRNASQKEIKKAYYQLA ILGVPRNASQKEIKKAYYQLAKKYHPDTNK R N A K K A 1 0 1 0 0 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 0 0 9 2 1044.5928 Q96EY1 Q96EY1 103 111 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.0090916 147.29 By MS/MS 7 0 1 1 360690 360690 0 10401 2169 10870 25906 18321 18321 1 6445.7 0 NASYYGNR EAYNYYTKAIDMCPKNASYYGNRAATLMML AIDMCPKNASYYGNRAATLMMLGRFREALG K N A N R A 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 8 0 943.41479 Q99615 Q99615 61 68 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 0.0053588 135.77 By MS/MS 6 0 1 1 1762800 1762800 0 10402 2276 10871 25907 18322 18322 1 13747 0 NATAVTGR VAGLTLLAVGVYSAKNATAVTGRFIEARLG VGVYSAKNATAVTGRFIEARLGKPSLVRET K N A G R F 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 1 0 0 8 0 788.41407 Q5T9A4 Q5T9A4 266 273 ATAD3B ATPase family AAA domain-containing protein 3B no no 2 0.045366 93.162 By MS/MS 5 0 1 1 1282000 1282000 0 10403 1634 10872 25908 18323 18323 1 52695 0 NATDAVGIVLK SPLGEVVEQGITRVRNATDAVGIVLKELKR TRVRNATDAVGIVLKELKRQSSLGMFHLLV R N A L K E 2 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1099.6237 P51398 P51398 235 245 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 3.0715E-17 232.41 By MS/MS By matching 7.33 0.471 2 1 2 1 28213000 28183000 30119 10404 963 10873 25909;25910;25911 18324;18325 18324 2 566850 123640 NATLLFPESIR VSLVVQWVDITRLEKNATLLFPESIRVDTR RLEKNATLLFPESIRVDTRDQELFFSMFLN K N A I R V 1 1 1 0 0 0 1 0 0 1 2 0 0 1 1 1 1 0 0 0 0 0 11 0 1259.6874 Q66K14 Q66K14 208 218 TBC1D9B TBC1 domain family member 9B yes yes 2 3.0554E-06 176.48 By MS/MS 3 0 1 1 329310 329310 0 10405 1669 10874 25912 18326 18326 1 8596.6 0 NATLVAGR VAGLTLLAVGVYSAKNATLVAGRFIEARLG VGVYSAKNATLVAGRFIEARLGKPSLVRET K N A G R F 2 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 800.45045 Q9NVI7 Q9NVI7 314 321 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.052476 90.37 By MS/MS 5.5 0.5 1 1 2 9838700 9838700 0 10406 2655 10875 25913;25914 18327 18327 1 94340 0 NAVEEYVYEFR MIMQDKLEKERNDAKNAVEEYVYEFRDKLC NDAKNAVEEYVYEFRDKLCGPYEKFICEQD K N A F R D 1 1 1 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 2 2 0 0 11 0 1417.6514 Q92598 Q92598 636 646 HSPH1 Heat shock protein 105 kDa yes yes 2 8.4078E-08 194.12 By MS/MS 4 0 1 1 821370 821370 0 10407 2063 10876 25915 18328 18328 1 22423 0 NAVITVPAYFNDSQR KMKETAENYLGHTAKNAVITVPAYFNDSQR NAVITVPAYFNDSQRQATKDAGQISGLNVL K N A Q R Q 2 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 1 0 1 2 0 0 15 0 1693.8424 P38646 P38646 188 202 HSPA9 Stress-70 protein, mitochondrial yes yes 2 7.0963E-06 151.26 By MS/MS By matching 6.67 1.83 4 1 1 1 1 1 8 1 53679000 53613000 66021 10408 820 10877 25916;25917;25918;25919;25920;25921;25922;25923;25924 18329;18330;18331;18332;18333;18334;18335;18336 18330 8 2337900 195360 NAVLAIYTIYR AIRACLEHRHSYVRRNAVLAIYTIYRNFEH YVRRNAVLAIYTIYRNFEHLIPDAPELIHD R N A Y R N 2 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 1 0 2 1 0 0 11 0 1295.7238 P53618 P53618 154 164 COPB1 Coatomer subunit beta yes yes 2 1.2996E-05 174.98 By MS/MS 4.5 0.5 1 1 2 353690 353690 0 10409 1004 10878 25925;25926 18337 18337 1 9980.4 0 NAVLNTEAR RMQQYDLQGQPYGTRNAVLNTEARTMAAEV QPYGTRNAVLNTEARTMAAEVLSRRCVLMR R N A A R T 2 1 2 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 986.51451 Q969V3 Q969V3 65 73 NCLN Nicalin yes yes 2 0.00040063 155.58 By MS/MS 6 0 1 1 10798000 10798000 0 10410 2109 10879 25927 18338 18338 1 84204 0 NAVTQEFGPVPDTAR IGAINIENGKANSVRNAVTQEFGPVPDTAR NAVTQEFGPVPDTARYYKKHGIRWVVIGDE R N A A R Y 2 1 1 1 0 1 1 1 0 0 0 0 0 1 2 0 2 0 0 2 0 0 15 0 1600.7845 Q99798 Q99798 634 648 ACO2 Aconitate hydratase, mitochondrial yes yes 2 3.3176E-38 257.2 By MS/MS 5 0 1 1 3203900 3203900 0 10411 2292 10880 25928 18339 18339 1 131690 0 NAVVVITGATSGLGK LFRLLQWVRGKAYLRNAVVVITGATSGLGK NAVVVITGATSGLGKECAKVFYAAGAKLVL R N A G K E 2 0 1 0 0 0 0 3 0 1 1 1 0 0 0 1 2 0 0 3 0 0 15 0 1385.7878 Q6IAN0 Q6IAN0 52 66 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 2.0481E-20 218.02 By MS/MS 8 0 1 1 1753600 1753600 0 10412 1682 10881 25929 18340 18340 1 115690 0 NAVWALSNLCR LLTLLTKSTRLTMTRNAVWALSNLCRGKNP TMTRNAVWALSNLCRGKNPPPEFAKVSPCL R N A C R G 2 1 2 0 1 0 0 0 0 0 2 0 0 0 0 1 0 1 0 1 0 0 11 0 1302.6503 O60684;O15131;P52294 O60684 229 239 KPNA6;KPNA5;KPNA1 Importin subunit alpha-7;Importin subunit alpha-6;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 2 8.6437E-05 163.88 By MS/MS 6 0 1 1 2129200 2129200 0 10413 258;984 10882 25930 18341 18341 1 16603 0 NAWADNANACAK GQKLEEQDEFEKIYKNAWADNANACAKQYA IYKNAWADNANACAKQYAGTGALKTDFTRT K N A A K Q 5 0 3 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 12 0 1304.5568 Q9NTJ5 Q9NTJ5 436 447 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 6.2125E-07 199.68 By MS/MS 3 1.87 1 1 1 1 4 3087600 3087600 0 10414 2631 10883 25931;25932;25933;25934 18342;18343;18344 18344 3 68379 0 NCAASGSDPTDLNSPLLFGR QSTRIGLKLIDILLRNCAASGSDPTDLNSP GSDPTDLNSPLLFGRLNGLSSDSTIDILYQ R N C G R L 2 1 2 2 1 0 0 2 0 0 3 0 0 1 2 3 1 0 0 0 0 0 20 0 2090.9691 Q9NR09 Q9NR09 3403 3422 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.00016651 118.19 By MS/MS 2 0.816 1 1 1 3 331220 331220 0 10415 2596 10884 25935;25936;25937 18345 18345 1 14848 0 NCDGVPALVR NISFGRDQDNKIAIKNCDGVPALVRLLRKA KIAIKNCDGVPALVRLLRKARDMDLTEVIT K N C V R L 1 1 1 1 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 10 0 1099.5444 O60716 O60716 449 458 CTNND1 Catenin delta-1 yes yes 2 0.042621 80.688 By MS/MS 4.5 0.5 1 1 2 2095600 2095600 0 10416 260 10885 25938;25939 18346 18346 1 60051 0 NCEPMIGLVPILK TIERNPYTIFHQALKNCEPMIGLVPILKGG LKNCEPMIGLVPILKGGRFYQVPVPLPDRR K N C L K G 0 0 1 0 1 0 1 1 0 2 2 1 1 0 2 0 0 0 0 1 0 0 13 0 1482.7938 Q9Y2R9 Q9Y2R9 151 163 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 1.8413E-08 193.3 By MS/MS 8.75 0.829 2 1 1 4 5115700 5115700 0 10417 2899 10886;10887 25940;25941;25942;25943 18347;18348 18347 1670 2 438520 0 NCFASVFEK ASKDSIVHQAGMLKRNCFASVFEKYFQFQE AGMLKRNCFASVFEKYFQFQEEGKEGENRA R N C E K Y 1 0 1 0 1 0 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 0 9 0 1100.4961 O15144 O15144 119 127 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 2 0.020116 96.668 By MS/MS 8 0 1 1 746810 746810 0 10418 152 10888 25944 18349 18349 1 49267 0 NCGQMSEIEAK YVKQKGERKIFQAHKNCGQMSEIEAKVRYV QAHKNCGQMSEIEAKVRYVKLARSLKTYGV K N C A K V 1 0 1 0 1 1 2 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 11 0 1265.538 Q9Y490 Q9Y490 285 295 TLN1 Talin-1 yes yes 2 3.3345E-05 193.83 By MS/MS 2 0 2 2 788030 788030 0 10419 2947 10889;10890 25945;25946 18350;18351 18350 1693 2 39169 0 NCGSFTR NVDGLIGVAFVDMLRNCGSFTREEADEYID VAFVDMLRNCGSFTREEADEYIDIGALNGI R N C T R E 0 1 1 0 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 7 0 840.35484 P53396 P53396 1039 1045 ACLY ATP-citrate synthase yes yes 2 0.027209 116.88 By MS/MS 2.5 1.12 1 1 1 1 4 6136500 6136500 0 10420 1001 10891 25947;25948;25949;25950 18352 18352 1 177530 0 NCIEIVNK QRAQFAEATQRLSERNCIEIVNKLIAQKQL TQRLSERNCIEIVNKLIAQKQLEVVHTLDG R N C N K L 0 0 2 0 1 0 1 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 8 0 988.50117 O94874 O94874 31 38 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0013829 166.68 By MS/MS 5 0 1 1 2739900 2739900 0 10421 354 10892 25951 18353 18353 1 112620 0 NCIGDFLK FTISDHPQPIDPLLKNCIGDFLKTLEDPDL PIDPLLKNCIGDFLKTLEDPDLNVRRVALV K N C L K T 0 0 1 1 1 0 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 965.46405 Q86VP6 Q86VP6 1006 1013 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.005704 134.48 By MS/MS 3.5 0.5 1 1 2 1489500 1489500 0 10422 1829 10893 25952;25953 18354;18355 18354 2 40130 0 NCIIVSPDAGGAK PAVLQWIRENIAEWKNCIIVSPDAGGAKRV WKNCIIVSPDAGGAKRVTSIADRLNVEFAL K N C A K R 2 0 1 1 1 0 0 2 0 2 0 1 0 0 1 1 0 0 0 1 0 0 13 0 1300.6445 P11908 P11908 164 176 PRPS2 Ribose-phosphate pyrophosphokinase 2 no no 2 0.051729 90.913 By MS/MS 8 0 1 1 720170 720170 0 10423 559 10894 25954 18356 18356 1 47509 0 NCISTVVHQGLIR VKVFLALAAKGPVLRNCISTVVHQGLIRIC LRNCISTVVHQGLIRICSKPVVLPKGPESE R N C I R I 0 1 1 0 1 1 0 1 1 2 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1495.7929 P78527 P78527 477 489 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.012274 81.625 By MS/MS 1 0 1 1 877570 877570 0 10424 1197 10895 25955 18357 18357 1 42876 0 NCIVLIDSTPYR NASNNELVRTKTLVKNCIVLIDSTPYRQWY LVKNCIVLIDSTPYRQWYESHYALPLGRKK K N C Y R Q 0 1 1 1 1 0 0 0 0 2 1 0 0 0 1 1 1 0 1 1 0 0 12 0 1449.7286 P62241 P62241 99 110 RPS8 40S ribosomal protein S8 yes yes 2 3.5785E-07 224.75 By MS/MS 8 0.816 1 1 1 3 6051800 6051800 0 10425 1118 10896 25956;25957;25958 18358;18359 18358 2 758310 0 NCLEVLPTK SASSGKCLMEVTVDRNCLEVLPTKMSYAAN EVTVDRNCLEVLPTKMSYAANLKNVMNMQN R N C T K M 0 0 1 0 1 0 1 0 0 0 2 1 0 0 1 0 1 0 0 1 0 0 9 0 1072.5587 O95071 O95071 2093 2101 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.005395 114.86 By MS/MS 1 0 1 1 351410 351410 0 10426 364 10897 25959 18360 18360 1 17169 0 NCLVYSIPTNSSK LGDMIWEDLSECLIKNCLVYSIPTNSSKLQ IKNCLVYSIPTNSSKLQQYEEIIQSTEEFE K N C S K L 0 0 2 0 1 0 0 0 0 1 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1481.7184 O43264 O43264 345 357 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.00094649 132.03 By MS/MS 4.5 0.5 1 1 2 2506200 2506200 0 10427 189 10898 25960;25961 18361 18361 1 72811 0 NCNDFQYESK VCNDVLSLLDKFLIKNCNDFQYESKVFYLK KFLIKNCNDFQYESKVFYLKMKGDYYRYLA K N C S K V 0 0 2 1 1 1 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 10 0 1303.5139 Q04917 Q04917 111 120 YWHAH 14-3-3 protein eta yes yes 2 1.1763E-06 180.67 By MS/MS 8 0 1 1 644220 644220 0 10428 1268 10899 25962 18362 18362 1 42499 0 NCPPSPLPLISK CGLPSPISTNRQIQKNCPPSPLPLISKQSP IQKNCPPSPLPLISKQSPQTSFPYKIMPIQ K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 Q8IWC1 Q8IWC1 520 531 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.0055479 103.44 By MS/MS 3 0.816 1 1 1 3 1397700 1397700 0 10429 1864 10900 25963;25964;25965 18363 18363 1 37617 0 NCSSFLIK ______________________________ LQWMVVRNCSSFLIKRNKQTYSTEPNNLKA R N C I K R 0 0 1 0 1 0 0 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 8 0 967.4797 P46779 P46779 12 19 RPL28 60S ribosomal protein L28 yes yes 2 0.024035 101.54 By MS/MS 9 0 1 1 927470 927470 0 10430 886 10901 25966 18364 18364 1 532280 0 NCTIVSPDAGGAK PAVLKWIRENISEWRNCTIVSPDAGGAKRV WRNCTIVSPDAGGAKRVTSIADRLNVDFAL R N C A K R 2 0 1 1 1 0 0 2 0 1 0 1 0 0 1 1 1 0 0 1 0 0 13 0 1288.6082 P60891 P60891 164 176 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes yes 2 0.0010654 130.56 By MS/MS 8.5 0.5 1 1 2 2025500 2025500 0 10431 1076 10902 25967;25968 18365 18365 1 154880 0 NCTYTQVQTR GTQTDLFTCGKCKKKNCTYTQVQTRSADEP KCKKKNCTYTQVQTRSADEPMTTFVVCNEC K N C T R S 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 3 0 1 1 0 0 10 0 1269.5772 P23193;Q15560 P23193 270 279 TCEA1;TCEA2 Transcription elongation factor A protein 1;Transcription elongation factor A protein 2 yes no 2 1.0579E-37 280.03 By MS/MS 8 0.816 1 1 1 3 955640 955640 0 10432 664 10903 25969;25970;25971 18366 18366 1 38028 0 NCVAIAADR IMSYNGGAVMAMKGKNCVAIAADRRFGIQA MAMKGKNCVAIAADRRFGIQAQMVTTDFQK K N C D R R 3 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 988.47601 P49720 P49720 18 26 PSMB3 Proteasome subunit beta type-3 yes yes 2 0.0026132 123.21 By MS/MS 9 0 1 1 1154800 1154800 0 10433 926 10904 25972 18367 18367 1 662750 0 NCVSATEEEVTPQHR EELLDVLQSLPPAWRNCVSATEEEVTPQHR NCVSATEEEVTPQHRLWPLLEKDSSLEARQ R N C H R L 1 1 1 0 1 1 3 0 1 0 0 0 0 0 1 1 2 0 0 2 0 0 15 0 1755.7846 Q8N1F8 Q8N1F8 917 931 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 3 0.033548 63.128 By MS/MS 3 0 1 1 891660 891660 0 10434 1899 10905 25973 18368 18368 1 23277 0 NDALSMIIK LTDEELKKEAKNEAKNDALSMIIKSLKNLA AKNEAKNDALSMIIKSLKNLASRVPGQEET K N D I K S 1 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 9 0 1003.5372 Q93008;O00507 Q93008 304 312 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.050542 81.525 By MS/MS 2 0 1 1 66187 66187 0 10435 2096 10906 25974 18369 18369 1 3289.9 0 NDAPHKNTQEK NSISRYNGEPEHIERNDAPHKNTQEKFSLS HIERNDAPHKNTQEKFSLSQESSYIATQYS R N D E K F 1 0 2 1 0 1 1 0 1 0 0 2 0 0 1 0 1 0 0 0 0 0 11 1 1280.6109 Q14739 Q14739 142 152 LBR Lamin-B receptor yes yes 2 0.0039935 141.1 By MS/MS 6 0 1 1 151380 151380 0 10436 1445 10907 25975 18370 18370 1 1180.5 0 NDAPTPGTSTTPGLR KSSTPGLKSNTPTPRNDAPTPGTSTTPGLR NDAPTPGTSTTPGLRSMPGKPPGMDPIGIM R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 Q04726 Q04726 324 338 TLE3 Transducin-like enhancer protein 3 yes yes 2 1.2868E-05 145.31 By MS/MS 5 0.816 1 1 1 3 1460500 1460500 0 10437 1265 10908 25976;25977;25978 18371 18371 1 41346 0 NDELTSLAEETR HCEELEKQLIEFQHRNDELTSLAEETRALK QHRNDELTSLAEETRALKDEIDVLRATSDK R N D T R A 1 1 1 1 0 0 3 0 0 0 2 0 0 0 0 1 2 0 0 0 0 0 12 0 1376.642 Q9UJC3 Q9UJC3 289 300 HOOK1 Protein Hook homolog 1 yes yes 2 2.5279E-11 209.19 By MS/MS 4 0 1 1 847250 847250 0 10438 2794 10909 25979 18372 18372 1 23129 0 NDGAAILAAVSSIAQK AKKPMVVLGSSALQRNDGAAILAAVSSIAQ DGAAILAAVSSIAQKIRMTSGVTGDWKVMN R N D Q K I 5 0 1 1 0 1 0 1 0 2 1 1 0 0 0 2 0 0 0 1 0 0 16 0 1527.8257 P28331 P28331 484 499 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 1.329E-22 203.85 By MS/MS 5 0 1 1 0 0 0 10439 718 10910 25980 18373 18373 1 0 0 NDGVLLLQALTR SRLMDLLADSREVIRNDGVLLLQALTRSNG VIRNDGVLLLQALTRSNGAIQKIVAFENAF R N D T R S 1 1 1 1 0 1 0 1 0 0 4 0 0 0 0 0 1 0 0 1 0 0 12 0 1311.751 O60763 O60763 184 195 USO1 General vesicular transport factor p115 yes yes 2 5.9835E-11 202.05 By MS/MS 4 0 1 1 365660 365660 0 10440 264 10911 25981 18374 18374 1 9982 0 NDHDDDEDEEVISK DVMVRCLKLLKEFKRNDHDDDEDEEVISKT RNDHDDDEDEEVISKTVPPVDIVFERDMLT R N D S K T 0 0 1 5 0 0 3 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 14 0 1658.6544 Q12789 Q12789 342 355 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.0023627 106.76 By MS/MS 2 0 1 1 176390 176390 0 10441 1306 10912 25982 18375 18375 1 8767.5 0 NDIASHPPVEGSYAPR VETGTQLEKLMENMRNDIASHPPVEGSYAP DIASHPPVEGSYAPRRGEFCIAKFVDGEWY R N D P R R 2 1 1 1 0 0 1 1 1 1 0 0 0 0 3 2 0 0 1 1 0 0 16 0 1708.8169 Q7KZF4 Q7KZF4 716 731 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 3 0.0072221 78.244 By MS/MS 4 0 1 1 745290 745290 0 10442 1757 10913 25983 18376 18376 1 20345 0 NDIFEDAGILCQR VDVYIKQCQEGAYLRNDIFEDAGILCQRVN LRNDIFEDAGILCQRVNKQVGDIFSNPETV R N D Q R V 1 1 1 2 1 1 1 1 0 2 1 0 0 1 0 0 0 0 0 0 0 0 13 0 1549.7195 O00471 O00471 244 256 EXOC5 Exocyst complex component 5 yes yes 2 3.787E-05 162.93 By MS/MS 5 0 1 1 500540 500540 0 10443 98 10914 25984 18377 18377 1 20574 0 NDIHTLLK WLEYRVTQVDGHSSKNDIHTLLKDLNSYLE VDGHSSKNDIHTLLKDLNSYLEDKVYLTGY K N D L K D 0 0 1 1 0 0 0 0 1 1 2 1 0 0 0 0 1 0 0 0 0 0 8 0 952.53418 O43324 O43324 89 96 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.00079654 176.09 By MS/MS 9.5 0.5 1 1 2 2425400 2425400 0 10444 194 10915 25985;25986 18378 18378 1 1480800 0 NDLEEAFIHFMGK LSPGNGKDHSILHSRNDLEEAFIHFMGKGA SRNDLEEAFIHFMGKGAAAERFFSDKETFH R N D G K G 1 0 1 1 0 0 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 13 0 1549.7235 Q9BRR6 Q9BRR6 113 125 ADPGK ADP-dependent glucokinase yes yes 3 0.054 79.089 By MS/MS 6 0 1 1 344810 344810 0 10445 2327 10916 25987 18379 18379 1 2688.9 0 NDLGVGYLLIGDNDNAK LQRLVQLFPNDTSLKNDLGVGYLLIGDNDN LGVGYLLIGDNDNAKKVYEEVLSVTPNDGF K N D A K K 1 0 3 3 0 0 0 3 0 1 3 1 0 0 0 0 0 0 1 1 0 0 17 0 1789.8846 Q12797 Q12797 458 474 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 8.1485E-25 216 By MS/MS 3.5 0.5 1 1 2 699450 699450 0 10446 1307 10917 25988;25989 18380 18380 1 19057 0 NDLSPASSGNAVYDFFIGR VLSVYLYMRSLKAPRNDLSPASSGNAVYDF PASSGNAVYDFFIGRELNPRIGTFDLKYFC R N D G R E 2 1 2 2 0 0 0 2 0 1 1 0 0 2 1 3 0 0 1 1 0 0 19 0 2028.9541 Q14739 Q14739 354 372 LBR Lamin-B receptor yes yes 2 4.9125E-34 235.93 By MS/MS 6 0 1 1 1314500 1314500 0 10447 1445 10918 25990 18381 18381 1 10250 0 NDNDTFTVK VVGPAEADIDFDIIRNDNDTFTVKYTPRGA DFDIIRNDNDTFTVKYTPRGAGSYTIMVLF R N D V K Y 0 0 2 2 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 1 0 0 9 0 1052.4775 P21333 P21333 829 837 FLNA Filamin-A no no 2 0.00022264 162.64 By MS/MS 3 0.816 1 1 1 3 1195800 1195800 0 10448 648 10919 25991;25992;25993 18382 18382 1 48593 0 NDSEQFAALLLVTK NPTLERYLGALREAKNDSEQFAALLLVTKA KNDSEQFAALLLVTKAVKAGDIDAKTRRRI K N D T K A 2 0 1 1 0 1 1 0 0 0 3 1 0 1 0 1 1 0 0 1 0 0 14 0 1547.8195 Q9UBB6 Q9UBB6 48 61 NCDN Neurochondrin yes yes 2 2.9631E-12 206.32 By MS/MS 5 0 1 1 130750 130750 0 10449 2745 10920 25994 18383 18383 1 5374.6 0 NDSLESTGLGLSSSR LFDYYLYAIYTFFGRNDSLESTGLGLSSSR NDSLESTGLGLSSSRLRTTLNRIQESLIDL R N D S R L 0 1 1 1 0 0 1 2 0 0 3 0 0 0 0 5 1 0 0 0 0 0 15 0 1521.7271 Q96JG6 Q96JG6 657 671 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 1.2733E-16 203.32 By MS/MS 4 0 1 1 0 0 0 10450 2208 10921 25995 18384 18384 1 0 0 NDSPTQIPVSSDVCR FQSNALPTLSASGARNDSPTQIPVSSDVCR NDSPTQIPVSSDVCRLTPA___________ R N D C R L 0 1 1 2 1 1 0 0 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1673.7679 Q8TC07 Q8TC07 673 687 TBC1D15 TBC1 domain family member 15 yes yes 2 1.0424E-05 181.98 By MS/MS 5 0 1 1 1435000 1435000 0 10451 1991 10922 25996 18385 18385 1 58986 0 NDSQHLFIEPR SGDEKGVVFCYWFNRNDSQHLFIEPRTIFC WFNRNDSQHLFIEPRTIFCLTCSPHHEDLV R N D P R T 0 1 1 1 0 1 1 0 1 1 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1354.663 Q8TEQ6 Q8TEQ6 142 152 GEMIN5 Gem-associated protein 5 yes yes 2 0.0017121 131.83 By MS/MS 3 0 1 1 578470 578470 0 10452 2003 10923 25997 18386;18387 18386 2 15101 0 NDSVVAGGGAIEMELSK RSLHDAIMIVRRAIKNDSVVAGGGAIEMEL SVVAGGGAIEMELSKYLRDYSRTIPGKQQL K N D S K Y 2 0 1 1 0 0 2 3 0 1 1 1 1 0 0 2 0 0 0 2 0 0 17 0 1675.8087 Q99832 Q99832 402 418 CCT7 T-complex protein 1 subunit eta yes yes 2 7.064E-83 317.91 By MS/MS 6 0 2 2 13054000 13054000 0 10453 2295 10924;10925 25998;25999 18388;18389 18389 1437 2 101800 0 NDSYTLHK IDINDVTPNCRVALRNDSYTLHKILPNKVD NCRVALRNDSYTLHKILPNKVDPLVSLMMV R N D H K I 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 1 1 0 1 0 0 0 8 0 976.46141 P62195 P62195 118 125 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.00059953 180.87 By MS/MS By matching 7.33 0.471 2 1 2 1 8188000 8163400 24555 10454 1117 10926 26000;26001;26002 18390 18390 1 166170 100800 NDVMNLLESAGFSR AKKDQYFLDKKMVTKNDVMNLLESAGFSRS KNDVMNLLESAGFSRSNPYYIVKQGKINQM K N D S R S 1 1 2 1 0 0 1 1 0 0 2 0 1 1 0 2 0 0 0 1 0 0 14 0 1551.7351 Q9UQE7 Q9UQE7 119 132 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 5.5917E-08 179.5 By MS/MS 3 0 1 1 226940 226940 0 10455 2860 10927 26003 18391;18392 18392 1647 2 5924.3 0 NDVNVEFSEK ESQVVITLMIKNVQKNDVNVEFSEKELSAL KNVQKNDVNVEFSEKELSALVKLPSGEDYN K N D E K E 0 0 2 1 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 2 0 0 10 0 1179.5408 Q9Y2Z0 Q9Y2Z0 195 204 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.00066809 138.25 By MS/MS 7 0 1 1 1475500 1475500 0 10456 2907 10928 26004 18393 18393 1 26368 0 NEDITEPQSILAAAEK LEKASRELWMRVWSRNEDITEPQSILAAAE EDITEPQSILAAAEKAGMSAEQAQGLLEKI R N E E K A 3 0 1 1 0 1 3 0 0 2 1 1 0 0 1 1 1 0 0 0 0 0 16 0 1727.8578 Q9Y2Q3 Q9Y2Q3 129 144 GSTK1 Glutathione S-transferase kappa 1 yes yes 2 1.417E-29 249.82 By MS/MS 9 0 1 1 4083600 4083600 0 10457 2895 10929 26005 18394 18394 1 2343600 0 NEDIVPTNYK WVVNTRLKLQGAKFRNEDIVPTNYKGIIDA GAKFRNEDIVPTNYKGIIDAFHQIIRDEGI R N E Y K G 0 0 2 1 0 0 1 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 10 0 1191.5772 O43808 O43808 138 147 SLC25A17 Peroxisomal membrane protein PMP34 yes yes 2 0.0053835 106.2 By MS/MS 1 0 1 1 261890 261890 0 10458 224 10930 26006 18395 18395 1 12796 0 NEDKILTIEVK KISHKRLNPDGKSIRNEDKILTIEVKKGWK KSIRNEDKILTIEVKKGWKEGTKITFPKEG R N E V K K 0 0 1 1 0 0 2 0 0 2 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1300.7238 P25685 P25685 199 209 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.00052062 166.29 By MS/MS 7 0 1 1 1265600 1265600 0 10459 686 10931 26007 18396 18396 1 22616 0 NEDLNAEDVYSR YLLGSDAAALLFNSKNEDLNAEDVYSRLTT NSKNEDLNAEDVYSRLTTPVFGKGVAYDVP K N E S R L 1 1 2 2 0 0 2 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 12 0 1423.6216 Q16850 Q16850 122 133 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 4.3442E-24 244.71 By MS/MS 6 0 1 1 8208000 8208000 0 10460 1551 10932 26008 18397 18397 1 64006 0 NEEDAAELVALAQAVNAR LHQFCAQHGRPPRPRNEEDAAELVALAQAV DAAELVALAQAVNARALPAVQQNNLDEDLI R N E A R A 6 1 2 1 0 1 3 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 18 0 1882.9385 P22314 P22314 351 368 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2;3 1.0146E-115 355.89 By MS/MS 4.75 0.829 2 1 1 4 2213700 2213700 0 10461 658 10933 26009;26010;26011;26012 18398;18399 18398 2 58794 0 NEELSVLLK EARTLASMLREVERKNEELSVLLKAQQVES REVERKNEELSVLLKAQQVESERAQSDIEH K N E L K A 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 9 0 1043.5863 Q8TCG1 Q8TCG1 686 694 KIAA1524 Protein CIP2A yes yes 2 0.0025523 123.86 By MS/MS 4.5 0.5 1 1 2 1499200 1499200 0 10462 1994 10934 26013;26014 18400 18400 1 56585 0 NEFIPTNFEILPLEK WQNADLNGKFKLPTKNEFIPTNFEILPLEK NEFIPTNFEILPLEKEATPYPALIKDTAMS K N E E K E 0 0 2 0 0 0 3 0 0 2 2 1 0 2 2 0 1 0 0 0 0 0 15 0 1802.9455 P14735 P14735 528 542 IDE Insulin-degrading enzyme yes yes 2 0.029128 76.522 By MS/MS 4 0 1 1 85634 85634 0 10463 592 10935 26015 18401 18401 1 2337.7 0 NEGFFALYK SGYTGTLDCLLQTWKNEGFFALYKGFWPNW LLQTWKNEGFFALYKGFWPNWLRLGPWNII K N E Y K G 1 0 1 0 0 0 1 1 0 0 1 1 0 2 0 0 0 0 1 0 0 0 9 0 1087.5338 Q5SVS4 Q5SVS4 255 263 SLC25A30 Kidney mitochondrial carrier protein 1 yes yes 2 0.0023709 125.82 By MS/MS 8 0 1 1 1017300 1017300 0 10464 1620 10936 26016 18402 18402 1 67111 0 NEGNIFPNPEATFVK YLRINFYCPGSALGRNEGNIFPNPEATFVK NEGNIFPNPEATFVKEITYRASNIKAPGEQ R N E V K E 1 0 3 0 0 0 2 1 0 1 0 1 0 2 2 0 1 0 0 1 0 0 15 0 1675.8206 Q9Y5B9 Q9Y5B9 582 596 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00010112 136.51 By MS/MS 2 0.816 1 1 1 3 1729300 1729300 0 10465 2968 10937 26017;26018;26019 18403;18404 18404 2 55289 0 NEGSESAPEGQAQQR RNYQQNYQNSESGEKNEGSESAPEGQAQQR NEGSESAPEGQAQQRRPYRRRRFPPYYMRR K N E Q R R 2 1 1 0 0 3 3 2 0 0 0 0 0 0 1 2 0 0 0 0 0 0 15 0 1586.6921 P67809 P67809 171 185 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 2 7.4775E-29 246.63 By MS/MS By matching 6 0 2 1 1 1578800 1566100 12755 10466 1182 10938 26020;26021 18405 18405 1 12212 39120 NEGVATYAAAVLFR AEGATAPLTELLHSRNEGVATYAAAVLFRM RNEGVATYAAAVLFRMSEDKPQDYKKRLSV R N E F R M 4 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 2 0 0 14 0 1480.7674 P35222 P35222 648 661 CTNNB1 Catenin beta-1 yes yes 2 0.01629 84.821 By MS/MS 4 0 1 1 86718 86718 0 10467 781 10939 26022 18406 18406 1 2367.3 0 NEINIDTLAR WKMFYDARKPRSQIKNEINIDTLARDEFNL RSQIKNEINIDTLARDEFNLQKMMVMVTAS K N E A R D 1 1 2 1 0 0 1 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1157.6041 Q8N766 Q8N766 518 527 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.030839 84.817 By MS/MS 2 0.816 1 1 1 3 606510 606510 0 10468 1931 10940 26023;26024;26025 18407 18407 1 23491 0 NEKEPMVLK GDFWDGFEDVPNRLKNEKEPMVLKLKDWPP VPNRLKNEKEPMVLKLKDWPPGEDFRDMMP K N E L K L 0 0 1 0 0 0 2 0 0 0 1 2 1 0 1 0 0 0 0 1 0 0 9 1 1086.5743 Q9Y4C1 Q9Y4C1 1036 1044 KDM3A Lysine-specific demethylase 3A yes yes 3 0.036521 99.136 By MS/MS 4.5 0.5 1 1 2 243280 243280 0 10469 2951 10941 26026;26027 18408 18408 1703 0 9223 0 NELEIPGQYDGR ECSPWMSDFKVEFLRNELEIPGQYDGRGKP FLRNELEIPGQYDGRGKPLPEYHVRIAGFD R N E G R G 0 1 1 1 0 1 2 2 0 1 1 0 0 0 1 0 0 0 1 0 0 0 12 0 1389.6525 P78527 P78527 3697 3708 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 7.6965E-11 213.35 By MS/MS 4 2 1 1 1 1 1 1 1 7 10460000 10460000 0 10470 1197 10942 26028;26029;26030;26031;26032;26033;26034 18409;18410;18411 18410 3 378420 0 NELESYAYSLK FAEEDKKLKERIDTRNELESYAYSLKNQIG IDTRNELESYAYSLKNQIGDKEKLGGKLSS R N E L K N 1 0 1 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 2 0 0 0 11 0 1315.6296 P11021 P11021 563 573 HSPA5 78 kDa glucose-regulated protein yes yes 2 6.1263E-16 217.02 By MS/MS By matching 5 0 2 1 1 9119500 9086400 33182 10471 545 10943 26035;26036 18412 18412 1 373490 98184 NELIEAFK FVIPSVYWVEDQNKKNELIEAFKQGMGKKA VEDQNKKNELIEAFKQGMGKKACKYFEQGK K N E F K Q 1 0 1 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 0 962.5073 Q9H000 Q9H000 312 319 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes yes 2 0.013087 115.7 By MS/MS 6.5 0.5 1 1 2 1799800 1799800 0 10472 2446 10944 26037;26038 18413 18413 1 24050 0 NELQLVDLPTGR LSFATSTPNNMGLVRNELQLVDLPTGRSIA LVRNELQLVDLPTGRSIAFRGERGNDESAI R N E G R S 0 1 1 1 0 1 1 1 0 0 3 0 0 0 1 0 1 0 0 1 0 0 12 0 1353.7252 Q9BZH6 Q9BZH6 545 556 WDR11 WD repeat-containing protein 11 yes yes 2 0.00014002 155.47 By MS/MS 2.5 1.12 1 1 1 1 4 1462900 1462900 0 10473 2422 10945 26039;26040;26041;26042 18414;18415;18416 18414 2 54467 0 NELSGALTGLTR RELPLRLADFGVLHRNELSGALTGLTRVRR LHRNELSGALTGLTRVRRFQQDDAHIFCAM R N E T R V 1 1 1 0 0 0 1 2 0 0 3 0 0 0 0 1 2 0 0 0 0 0 12 0 1230.6568 P26639 P26639 443 454 TARS Threonine--tRNA ligase, cytoplasmic yes yes 2 6.6638E-08 193.62 By MS/MS 5 0.816 1 1 1 3 1415100 1415100 0 10474 698 10946 26043;26044;26045 18417 18417 1 46294 0 NEMNCKEDQFQLSLLAAMGNTQR VQPDDPISFMQLTAKNEMNCKEDQFQLSLL QFQLSLLAAMGNTQRKEAADPLASKLNKVT K N E Q R K 2 1 3 1 1 3 2 1 0 0 3 1 2 1 0 1 1 0 0 0 0 0 23 1 2697.2309 P53618 P53618 680 702 COPB1 Coatomer subunit beta yes yes 3 0.005044 60.454 By MS/MS 4 0 1 1 365460 365460 0 10475 1004 10947 26046 18418 18418 772;773 1 9976.7 0 NENLQNLLCGSGAGVISK LKHLYKWAIPAEGKKNENLQNLLCGSGAGV LQNLLCGSGAGVISKTLTYPLDLFKKRLQV K N E S K T 1 0 3 0 1 1 1 3 0 1 3 1 0 0 0 2 0 0 0 1 0 0 18 0 1872.9364 Q9HC21 Q9HC21 214 231 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 1.3724E-14 192.78 By MS/MS 8 0 1 1 638720 638720 0 10476 2556 10948 26047 18419 18419 1 42136 0 NENQLIIFADDTYPR VSDVQESFIWVRYKRNENQLIIFADDTYPR NENQLIIFADDTYPRWVTTASLLDYDTVAG R N E P R W 1 1 2 2 0 1 1 0 0 2 1 0 0 1 1 0 1 0 1 0 0 0 15 0 1807.8741 Q15393 Q15393 1017 1031 SF3B3 Splicing factor 3B subunit 3 yes yes 2 1.0136E-09 179.59 By MS/MS 3.5 0.5 1 1 2 300410 300410 0 10477 1498 10949 26048;26049 18420 18420 1 7993.6 0 NEPLTFAWLR FVCSSLLQFARQYSRNEPLTFAWLRRYIKW RQYSRNEPLTFAWLRRYIKWPLLPPKNIKD R N E L R R 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 1 1 0 0 0 0 10 0 1245.6506 Q8IYB8 Q8IYB8 600 609 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.0037542 117.02 By MS/MS 5 0.816 1 1 1 3 524270 524270 0 10478 1879 10950 26050;26051;26052 18421 18421 1 16408 0 NEPQNATGAPGR NVNEIFMAIAKKLPKNEPQNATGAPGRNRG LPKNEPQNATGAPGRNRGVDLQENNPASRS K N E G R N 2 1 2 0 0 1 1 2 0 0 0 0 0 0 2 0 1 0 0 0 0 0 12 0 1210.5691 P51148 P51148 185 196 RAB5C Ras-related protein Rab-5C yes yes 2 3.2523E-05 169.82 By MS/MS 9 0 1 1 584510 584510 0 10479 959 10951 26053 18422 18422 1 335460 0 NEQDAYAINSYTR GSCAENTAKKLNIARNEQDAYAINSYTRSK ARNEQDAYAINSYTRSKAAWEAGKFGNEVI R N E T R S 2 1 2 1 0 1 1 0 0 1 0 0 0 0 0 1 1 0 2 0 0 0 13 0 1543.6903 P24752 P24752 209 221 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 2.1124E-05 169.09 By MS/MS 7.5 0.5 1 1 2 115320000 115320000 0 10480 680 10952 26054;26055 18423 18423 1 2214200 0 NESGTWIQYGEEK PANSVFTTKWIWYWKNESGTWIQYGEEKDK WKNESGTWIQYGEEKDKRKNSNVDSSYLES K N E E K D 0 0 1 0 0 1 3 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 13 0 1539.6842 Q7Z2W4 Q7Z2W4 613 625 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 9.6097E-59 294.49 By MS/MS 4 0 1 1 1533100 1533100 0 10481 1777 10953 26056 18424 18424 1 41851 0 NESSLASTLK PDKAALNALQPPEFRNESSLASTLKTLLFF PPEFRNESSLASTLKTLLFFTALMITVPIG R N E L K T 1 0 1 0 0 0 1 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 10 0 1048.5401 Q3ZAQ7 Q3ZAQ7 19 28 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 yes yes 2 1.0594E-06 182.16 By MS/MS 10 0 1 1 467780 467780 0 10482 1571 10954 26057 18425 18425 1 497200 0 NESTPPSEELELDKWK QRYMSSKIPAVTYPKNESTPPSEELELDKW ESTPPSEELELDKWKTTMKSSVQEECVSTI K N E W K T 0 0 1 1 0 0 4 0 0 0 2 2 0 0 2 2 1 1 0 0 0 0 16 1 1900.9054 Q7L0Y3 Q7L0Y3 52 67 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.031901 107.46 By MS/MS 7 0 1 1 1980800 1980800 0 10483 1761 10955 26058 18426 18426 1 35398 0 NETDEDGWTTVR SWRAEKDRESLRRTKNETDEDGWTTVRR__ RTKNETDEDGWTTVRR______________ K N E V R R 0 1 1 2 0 0 2 1 0 0 0 0 0 0 0 0 3 1 0 1 0 0 12 0 1421.6059 Q14152 Q14152 1370 1381 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.0904E-16 224.66 By MS/MS 3 0 1 1 529370 529370 0 10484 1409 10956 26059 18427 18427 1 13819 0 NETDYVGGLDLLR N E L R 0 1 1 2 0 0 1 2 0 0 3 0 0 0 0 0 1 0 1 1 0 0 13 0 1463.7256 REV__Q0VDD8 yes yes 2 0.039807 75.652 By MS/MS 5 0 2 2 551150 551150 0 + 10485 3028 10957 26060;26061 18428 18428 1 22654 0 NETGGGEGIEVLK EYQVGQLYSVAEASKNETGGGEGIEVLKNE SKNETGGGEGIEVLKNEPYEKDGEKGQYTH K N E L K N 0 0 1 0 0 0 3 4 0 1 1 1 0 0 0 0 1 0 0 1 0 0 13 0 1301.6463 P48739 P48739 32 44 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 2 0.037849 76.332 By MS/MS By matching 8 0 2 1 1 936110 904780 31335 10486 913 10958 26062;26063 18429 18429 1 59688 267330 NETSAPFK PTSGSKEKTKVEATKNETSAPFKERPTPSL TKVEATKNETSAPFKERPTPSLNNNCTTSE K N E F K E 1 0 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 892.42905 P07814 P07814 726 733 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.019809 107.01 By MS/MS 3 0 1 1 1856600 1856600 0 10487 493 10959 26064 18430 18430 1 48466 0 NEVAILQSLR IDKLRFPTKQESQLRNEVAILQSLRHPGIV ESQLRNEVAILQSLRHPGIVNLECMFETPE R N E L R H 1 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1141.6455 Q9BZL6 Q9BZL6 597 606 PRKD2 Serine/threonine-protein kinase D2 yes yes 2 9.7502E-16 222.3 By MS/MS 4 0 1 1 770070 770070 0 10488 2425 10960 26065 18431 18431 1 21022 0 NEVDSTLTFR NKCGPMVLDALIKIKNEVDSTLTFRRSCRE LIKIKNEVDSTLTFRRSCREGICGSCAMNI K N E F R R 0 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 10 0 1180.5724 P21912 P21912 81 90 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 1.0817E-06 181.87 By MS/MS 8 0 1 1 1092200 1092200 0 10489 651 10961 26066 18432 18432 1 72051 0 NEVSLVAEGFLPEDGSGR EHGLIEVDPVSREVKNEVSLVAEGFLPEDG SLVAEGFLPEDGSGRIVGVQDLLDQESVCV K N E G R I 1 1 1 1 0 0 3 3 0 0 2 0 0 1 1 2 0 0 0 2 0 0 18 0 1874.901 O95163 O95163 53 70 IKBKAP Elongator complex protein 1 yes yes 2 0.0042329 100.68 By MS/MS 3 0 1 1 132340 132340 0 10490 368 10962 26067 18433 18433 1 3454.9 0 NEVVGLIFR ______________________________ SRPLSRNEVVGLIFRLTIFGAVTYFTIKWM R N E F R L 0 1 1 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 9 0 1045.592 Q8NBU5 Q8NBU5 14 22 ATAD1 ATPase family AAA domain-containing protein 1 yes yes 2 0.00020724 180.44 By MS/MS 7.5 0.5 1 1 2 2131000 2131000 0 10491 1947 10963 26068;26069 18434;18435 18435 2 73810 0 NFAELYESFQNPK ALGHTRPSISEDDWKNFAELYESFQNPKRR WKNFAELYESFQNPKRRKNQSGTMFRPGQK K N F P K R 1 0 2 0 0 1 2 0 0 0 1 1 0 2 1 1 0 0 1 0 0 0 13 0 1585.7413 O43933 O43933 1252 1264 PEX1 Peroxisome biogenesis factor 1 yes yes 2 4.8188E-35 265 By MS/MS 3 0 1 1 190960 190960 0 10492 235 10964 26070 18436;18437 18436 2 4985 0 NFAEPGSEVYLR LMAHNGWVMGDDPLRNFAEPGSEVYLRREL PLRNFAEPGSEVYLRRELICWGDSVKLRYG R N F L R R 1 1 1 0 0 0 2 1 0 0 1 0 0 1 1 1 0 0 1 1 0 0 12 0 1380.6674 P35573 P35573 470 481 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.0037958 112.13 By MS/MS 3 0 1 1 860430 860430 0 10493 792 10965 26071 18438 18438 1 22462 0 NFAFLEFR APGNPVLAVQINQDKNFAFLEFRSVDETTQ VQINQDKNFAFLEFRSVDETTQAMAFDGII K N F F R S 1 1 1 0 0 0 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 8 0 1042.5236 P26368 P26368 196 203 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 2 0.0011609 170.24 By MS/MS 6 0 1 1 584350 584350 0 10494 694 10966 26072 18439 18439 1 4556.8 0 NFAQLTVSGSR ASDERGIQVVREKVKNFAQLTVSGSRSDGK EKVKNFAQLTVSGSRSDGKPCPPFKIVILD K N F S R S 1 1 1 0 0 1 0 1 0 0 1 0 0 1 0 2 1 0 0 1 0 0 11 0 1178.6044 P35249 P35249 125 135 RFC4 Replication factor C subunit 4 yes yes 2 0.00032297 149.94 By MS/MS 7 0 1 1 1582400 1582400 0 10495 785 10967 26073 18440 18440 1 28277 0 NFDEILR KKLKLSILYPATTGRNFDEILRVVISLQLT LYPATTGRNFDEILRVVISLQLTAEKRVAT R N F L R V 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 905.46068 P30041 P30041 156 162 PRDX6 Peroxiredoxin-6 yes yes 2 0.017928 132.08 By MS/MS 8.5 0.5 1 1 2 978690 978690 0 10496 729 10968 26074;26075 18441 18441 1 180880 0 NFDFEDVFVK SNVVINLIGRDWETKNFDFEDVFVKIPQAI DWETKNFDFEDVFVKIPQAIAQLSKEAGVE K N F V K I 0 0 1 2 0 0 1 0 0 0 0 1 0 3 0 0 0 0 0 2 0 0 10 0 1258.587 Q16795 Q16795 138 147 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 3.1648E-05 173.37 By MS/MS 7.5 0.5 1 1 2 1587400 1587400 0 10497 1548 10969 26076;26077 18442;18443 18443 2 97630 0 NFDQEGLVEHCK VPNRYTFPCPYCPEKNFDQEGLVEHCKLFH PEKNFDQEGLVEHCKLFHSTDTKSVVCPIC K N F C K L 0 0 1 1 1 1 2 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 12 0 1474.6511 Q9Y508 Q9Y508 150 161 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 2 2.9702E-11 227.37 By MS/MS 9 0 1 1 205890 205890 0 10498 2961 10970 26078 18444 18444 1 118160 0 NFDTIFLR CERPLGASDYLELSKNFDTIFLRNIPQFTL DYLELSKNFDTIFLRNIPQFTLANRTQGRR K N F L R N 0 1 1 1 0 0 0 0 0 1 1 0 0 2 0 0 1 0 0 0 0 0 8 0 1024.5342 Q8WV93 Q8WV93 367 374 LACE1 Lactation elevated protein 1 yes yes 2 7.2388E-05 194.9 By MS/MS 6 0 1 1 759190 759190 0 10499 2026 10971 26079 18445 18445 1 5920.2 0 NFEALNAR LSPMQKKYYKYILTRNFEALNARGGGNQVS YKYILTRNFEALNARGGGNQVSLLNVVMDL R N F A R G 2 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 933.46683 Q14839 Q14839 993 1000 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 2 0.0075842 127.46 By MS/MS 2 0 1 1 1146700 1146700 0 10500 1449 10972 26080 18446 18446 1 56997 0 NFEDVAFDEKK PEDWDKQPVKVLVGKNFEDVAFDEKKNVFV LVGKNFEDVAFDEKKNVFVEFYAPWCGHCK K N F K K N 1 0 1 2 0 0 2 0 0 0 0 2 0 2 0 0 0 0 0 1 0 0 11 1 1340.6248 P07237 P07237 376 386 P4HB Protein disulfide-isomerase yes yes 2 0.0018732 143.4 By MS/MS 6 0 1 1 3156900 3156900 0 10501 487 10973 26081 18447 18447 1 24617 0 NFEIAFK SDYIFLTTVLSTPQRNFEIAFKMFDLNGDG TVLSTPQRNFEIAFKMFDLNGDGEVDMEEF R N F F K M 1 0 1 0 0 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 7 0 867.44905 Q9BPX6 Q9BPX6 222 228 MICU1 Calcium uptake protein 1, mitochondrial yes yes 2 0.0072196 166.78 By MS/MS 6.5 0.5 1 1 2 1912600 1912600 0 10502 2303 10974 26082;26083 18448 18448 1 27764 0 NFELNLK ALQSALKLRQQLQAKNFELNLKTYHALLKM LRQQLQAKNFELNLKTYHALLKMAAKCADL K N F L K T 0 0 2 0 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 7 0 876.47052 O75127 O75127 242 248 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.015477 138.83 By MS/MS 5 0 1 1 1237500 1237500 0 10503 280 10975 26084 18449 18449 1 50865 0 NFGAENPDPFVPVLNTAVK INRQTALYTLKLLCKNFGAENPDPFVPVLN ENPDPFVPVLNTAVKLIAPERKEEKNVLGS K N F V K L 2 0 3 1 0 0 1 1 0 0 1 1 0 2 3 0 1 0 0 3 0 0 19 0 2028.0316 Q9H583 Q9H583 1680 1698 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.016925 71.692 By MS/MS 2.5 0.5 1 1 2 137270 137270 0 10504 2503 10976 26085;26086 18450 18450 1 5972.3 0 NFGASLLLPGLK HCLAKKTDFSWEEERNFGASLLLPGLKQKN EERNFGASLLLPGLKQKNSVGFSSQLYGYA R N F L K Q 1 0 1 0 0 0 0 2 0 0 4 1 0 1 1 1 0 0 0 0 0 0 12 0 1228.718 Q92552 Q92552 203 214 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 8.5506E-05 178.46 By MS/MS 7 0 1 1 606970 606970 0 10505 2059 10977 26087 18451 18451 1 10847 0 NFGDQPDIR PSGVLICSENYITYKNFGDQPDIRCPIPRR NYITYKNFGDQPDIRCPIPRRRNDLDDPER K N F I R C 0 1 1 2 0 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 9 0 1060.4938 Q15393 Q15393 260 268 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.0012323 138.08 By MS/MS 1 0 1 1 250860 250860 0 10506 1498 10978 26088 18452 18452 1 12257 0 NFGGTVSIIPVGEAK QLSGVLIADDHCTIKNFGGTVSIIPVGEAK NFGGTVSIIPVGEAKTYVNGKHILEITVLR K N F A K T 1 0 1 0 0 0 1 3 0 2 0 1 0 1 1 1 1 0 0 2 0 0 15 0 1487.7984 Q15058 Q15058 854 868 KIF14 Kinesin-like protein KIF14 yes yes 2 0.0048583 108.72 By MS/MS 3 0 1 1 514180 514180 0 10507 1475 10979 26089 18453 18453 1 13423 0 NFGIGQDIQPK EAKKVVNPLFEKRPKNFGIGQDIQPKRDLT KRPKNFGIGQDIQPKRDLTRFVKWPRYIRL K N F P K R 0 0 1 1 0 2 0 2 0 2 0 1 0 1 1 0 0 0 0 0 0 0 11 0 1215.6248 P62424 P62424 38 48 RPL7A 60S ribosomal protein L7a yes yes 2 8.7972E-07 180.09 By MS/MS By MS/MS 8 0 2 1 1 2180500 2061200 119280 10508 1135 10980 26090;26091 18454;18455 18455 2 135980 1017600 NFGSYVTHETK FDKKYNPTWHCIVGRNFGSYVTHETKHFIY IVGRNFGSYVTHETKHFIYFYLGQVAILLF R N F T K H 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 2 0 1 1 0 0 11 0 1281.599 P63167;Q96FJ2 P63167 61 71 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 2 0.00040759 172.56 By MS/MS 10 0 1 1 284490 284490 0 10509 1171 10981 26092 18456 18456 1 302390 0 NFILDQTNVSAAAQR QCLGKFIEIAARKKRNFILDQTNVSAAAQR NFILDQTNVSAAAQRRKMCLFAGFQRKAVV R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 0 1646.8376 Q00839 Q00839 576 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 3.7934E-38 255.24 By MS/MS 4 0.816 1 1 1 3 4394700 4394700 0 10510 1238 10982 26093;26094;26095 18457 18457 1 124330 0 NFKENVIRPILK NLGDVQISDKITISKNFKENVIRPILKAHF ISKNFKENVIRPILKAHFRRDEFLGRINEI K N F L K A 0 1 2 0 0 0 1 0 0 2 1 2 0 1 1 0 0 0 0 1 0 0 12 2 1469.8718 Q9H078 Q9H078 539 550 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.00053572 135.8 By MS/MS 6 0 1 1 6674300 6674300 0 10511 2448 10983 26096 18458 18458 1 52046 0 NFLEFQR TYFFGADLKGKLTIKNFLEFQRKLQHDVLK LKGKLTIKNFLEFQRKLQHDVLKLEFERHD K N F Q R K 0 1 1 0 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 7 0 952.47667 Q9BPX6 Q9BPX6 295 301 MICU1 Calcium uptake protein 1, mitochondrial yes yes 2 0.011664 149.4 By MS/MS 7.5 0.5 1 1 2 1294800 1294800 0 10512 2303 10984 26097;26098 18459 18459 1 29295 0 NFLTTAIR ILQERAVLGANDPEKNFLTTAIRPHGIFGP GANDPEKNFLTTAIRPHGIFGPRDPQLVPI K N F I R P 1 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 8 0 934.52362 Q15738 Q15738 192 199 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2 0.038612 95.815 By MS/MS 7 0 1 1 657450 657450 0 10513 1515 10985 26099 18460 18460 1 11749 0 NFLYAWCGK ______________________________ ______________________________ K N F G K R 1 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 1 0 0 0 9 0 1157.5328 Q08211 Q08211 6 14 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0026565 122.74 By MS/MS 3 0 1 1 222100 222100 0 10514 1287 10986 26100 18461 18461 1 5797.9 0 NFNLENR ______________________________ ALVIRGIRNFNLENRAEREISKMKPSVAPR R N F N R A 0 1 3 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 905.43553 Q9P032 Q9P032 11 17 NDUFAF4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 yes yes 2 0.032233 113.41 By MS/MS 9.5 0.5 1 1 2 7288600 7288600 0 10515 2722 10987 26101;26102 18462 18462 1 4215100 0 NFQEEQINTR AYPTVKFYFYERAKRNFQEEQINTRDAKAI ERAKRNFQEEQINTRDAKAIAALISEKLET R N F T R D 0 1 2 0 0 2 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 10 0 1277.6 Q8IXB1 Q8IXB1 757 766 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 1.9062E-21 240.13 By MS/MS By matching 5.75 0.829 2 1 1 3 1 4194400 4180100 14310 10516 1870 10988 26103;26104;26105;26106 18463 18463 1 117390 42342 NFQQAVQSALTK SSIYSMYTQQQAPGKNFQQAVQSALTKTHT PGKNFQQAVQSALTKTHTRGPHFSSVYGKP K N F T K T 2 0 1 0 0 3 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 12 0 1333.699 Q13625 Q13625 622 633 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 1.5162E-16 221.32 By MS/MS 3 0 1 1 651400 651400 0 10517 1391 10989 26107 18464 18464 1 17005 0 NFSDNQLQEGK GDPNWFPKKSKENPRNFSDNQLQEGKNVIG ENPRNFSDNQLQEGKNVIGLQMGTNRGASQ R N F G K N 0 0 2 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1278.584 P37802 P37802 161 171 TAGLN2 Transgelin-2 yes yes 2 4.9887E-09 195.51 By MS/MS 9 0 1 1 574390 574390 0 10518 815 10990 26108 18465 18465 1 329650 0 NFSEVFQK RKYEAIQLTFKQVSKNFSEVFQKLVPGGKA TFKQVSKNFSEVFQKLVPGGKATLVMKKGD K N F Q K L 0 0 1 0 0 1 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 0 8 0 997.4869 Q9UQE7 Q9UQE7 1039 1046 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.003131 148.99 By MS/MS 3 0 1 1 1392100 1392100 0 10519 2860 10991 26109 18466 18466 1 36340 0 NFSGAELEGLVR LSADVDIKELAVETKNFSGAELEGLVRAAQ ETKNFSGAELEGLVRAAQSTAMNRHIKAST K N F V R A 1 1 1 0 0 0 2 2 0 0 2 0 0 1 0 1 0 0 0 1 0 0 12 0 1290.6568 P46459 P46459 435 446 NSF Vesicle-fusing ATPase yes yes 2 7.2683E-44 280.38 By MS/MS 4 2 1 1 1 1 1 1 1 7 18984000 18984000 0 10520 881 10992 26110;26111;26112;26113;26114;26115;26116 18467;18468 18467 2 644770 0 NFSNMDDEENYSAASK RAQKGELLERLSSARNFSNMDDEENYSAAS FSNMDDEENYSAASKAVRQVLHQLKRLGIV R N F S K A 2 0 3 2 0 0 2 0 0 0 0 1 1 1 0 3 0 0 1 0 0 0 16 0 1820.7159 O43264 O43264 609 624 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 1.6503E-21 230.57 By MS/MS 4 0 1 1 833150 833150 0 10521 189 10993 26117 18469 18469 1 22744 0 NFVDSPIIVDITK WNLALNPEGGPNWVRNFVDSPIIVDITKDT VRNFVDSPIIVDITKDTFYKQPMFYHLGHF R N F T K D 0 0 1 2 0 0 0 0 0 3 0 1 0 1 1 1 1 0 0 2 0 0 13 0 1459.7922 P04062 P04062 435 447 GBA Glucosylceramidase yes yes 2 0.00046104 164.48 By MS/MS 5.5 0.5 1 1 2 1395400 1395400 0 10522 443 10994 26118;26119 18470 18470 1 15345 0 NFWSHETR QGLIDENPGLQLIIRNFWSHETRLPSNTLD GLQLIIRNFWSHETRLPSNTLDRLLALNSL R N F T R L 0 1 1 0 0 0 1 0 1 0 0 0 0 1 0 1 1 1 0 0 0 0 8 0 1075.4835 P78527 P78527 2523 2530 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.024767 101.25 By MS/MS 1 0 1 1 604010 604010 0 10523 1197 10995 26120 18471 18471 1 29511 0 NFYDSPEK HWEYYKHPISRWIARNFYDSPEKIYERTMA ISRWIARNFYDSPEKIYERTMAVLQIEAEK R N F E K I 0 0 1 1 0 0 1 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 8 0 998.43453 O43674 O43674 124 131 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 2 0.0052244 136.27 By MS/MS 10 0 1 1 848930 848930 0 10524 211 10996 26121 18472 18472 1 902320 0 NFYDSPEKIYER HWEYYKHPISRWIARNFYDSPEKIYERTMA IARNFYDSPEKIYERTMAVLQIEAEKAELR R N F E R T 0 1 1 1 0 0 2 0 0 1 0 1 0 1 1 1 0 0 2 0 0 0 12 1 1559.7256 O43674 O43674 124 135 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 3 0.047482 61.419 By MS/MS 10 0 1 1 557900 557900 0 10525 211 10997 26122 18473 18473 1 592990 0 NFYENLIDLK EYDLEGGIWEDEDARNFYENLIDLKAFVPA DEDARNFYENLIDLKAFVPAILFKDNEKSC R N F L K A 0 0 2 1 0 0 1 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 10 0 1267.6449 Q9HAU5 Q9HAU5 466 475 UPF2 Regulator of nonsense transcripts 2 yes yes 2 0.00084921 129.85 By MS/MS 3 0 1 1 93102 93102 0 10526 2545 10998 26123 18474 18474 1 2430.4 0 NFYVEVPELAK EPVDHGKIEYEPFRKNFYVEVPELAKMSQE PFRKNFYVEVPELAKMSQEEVNVFRLEMEG K N F A K M 1 0 1 0 0 0 2 0 0 0 1 1 0 1 1 0 0 0 1 2 0 0 11 0 1307.6762 Q7L014 Q7L014 334 344 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 2 0.01916 90.108 By MS/MS 3 0 1 1 345310 345310 0 10527 1759 10999 26124 18475 18475 1 9014.3 0 NGAVQTIAQR RYGFLWPGLNVPLMKNGAVQTIAQRSKEEQ VPLMKNGAVQTIAQRSKEEQEKVEADMIQQ K N G Q R S 2 1 1 0 0 2 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1056.5676 P82675 P82675 151 160 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 8.7967E-16 223.36 By MS/MS By matching 7 0 2 1 1 3571400 3551500 19924 10528 1205 11000 26125;26126 18476 18476 1 63465 81790 NGDGVVDIGELQEGLR EQPTRYETLFQALDRNGDGVVDIGELQEGL GDGVVDIGELQEGLRNLGIPLGQDAEEKIF R N G L R N 0 1 1 2 0 1 2 4 0 1 2 0 0 0 0 0 0 0 0 2 0 0 16 0 1669.8271 Q6NUK1 Q6NUK1 34 49 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 5.1555E-29 290.1 By MS/MS 7 0 1 1 2199300 2199300 0 10529 1690 11001 26127 18477 18477 1 39302 0 NGDILLLNR APKPQGTKIVCRHVKNGDILLLNRQPTLHR VCRHVKNGDILLLNRQPTLHRPSIQAHRAR K N G N R Q 0 1 2 1 0 0 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 9 0 1026.5822 O95602 O95602 544 552 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.001884 131.06 By MS/MS 2.5 0.5 1 1 2 233860 233860 0 10530 401 11002 26128;26129 18478 18478 1 9002.1 0 NGDTSTEEPMLNVQR YPPLLRAMIIAERQKNGDTSTEEPMLNVQR NGDTSTEEPMLNVQRIRMEPWDYPAKQEDK K N G Q R I 0 1 2 1 0 1 2 1 0 0 1 0 1 0 1 1 2 0 0 1 0 0 15 0 1689.7628 P82930 P82930 181 195 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2 2.5287E-16 182.71 By MS/MS 8 0 1 1 0 0 0 10531 1209 11003 26130 18479 18479 1 0 0 NGDYLCVK RNLFNVVDCKLHWQKNGDYLCVKVDRTPKG CKLHWQKNGDYLCVKVDRTPKGTQGVVTNF K N G V K V 0 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 8 0 967.44332 P55884 P55884 522 529 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0065765 131.22 By MS/MS By matching 3.33 0.471 2 1 2 1 3395000 3344600 50416 10532 1040 11004 26131;26132;26133 18480 18480 1 91001 72257 NGEFFMSPNDFVTR AELRTIFLKYASIEKNGEFFMSPNDFVTRY KNGEFFMSPNDFVTRYLNIFGESQPNPKTV K N G T R Y 0 1 2 1 0 0 1 1 0 0 0 0 1 3 1 1 1 0 0 1 0 0 14 0 1659.7351 Q9UJS0 Q9UJS0 30 43 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 1.5594E-12 210.15 By MS/MS 6.25 1.3 2 1 1 4 5182600 5182600 0 10533 2798 11005;11006 26134;26135;26136;26137 18481;18482;18483 18483 1627 2 209770 0 NGFLLDGFPR VVELIEKNLETPLCKNGFLLDGFPRTVRQA TPLCKNGFLLDGFPRTVRQAEMLDDLMEKR K N G P R T 0 1 1 1 0 0 0 2 0 0 2 0 0 2 1 0 0 0 0 0 0 0 10 0 1134.5822 P54819 P54819 94 103 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 2 9.0007E-06 175.93 By MS/MS 8 0 1 1 358910 358910 0 10534 1018 11007 26138 18484 18484 1 23677 0 NGFVVLK GASATFPMQCSALRKNGFVVLKGRPCKIVE MQCSALRKNGFVVLKGRPCKIVEMSTSKTG K N G L K G 0 0 1 0 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 2 0 0 7 0 775.45922 P63241;Q6IS14;Q9GZV4 P63241 28 34 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 2 0.0058134 175.93 By MS/MS By matching 10 0 2 1 1 7257400 7233800 23590 10535 1177 11008 26139;26140 18485 18485 1 7688800 605060 NGGQILIADLR ATCSSDRSVKIFDVRNGGQILIADLRGHEG FDVRNGGQILIADLRGHEGPVWQVAWAHPM R N G L R G 1 1 1 1 0 1 0 2 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1168.6564 P55735 P55735 44 54 SEC13 Protein SEC13 homolog yes yes 2 1.2996E-05 174.98 By MS/MS 7.5 0.5 1 1 2 2447200 2447200 0 10536 1033 11009 26141;26142 18486 18486 1 149540 0 NGGVVTTAFYDPR EVQLASELAIAAIEKNGGVVTTAFYDPRSL EKNGGVVTTAFYDPRSLDIVCKPVPFFLRG K N G P R S 1 1 1 1 0 0 0 2 0 0 0 0 0 1 1 0 2 0 1 2 0 0 13 0 1395.6783 Q9P015 Q9P015 170 182 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 0.00025587 177.44 By MS/MS 8 0 1 1 2776200 2776200 0 10537 2721 11010 26143 18487 18487 1 183140 0 NGLAAELGPASPR CPAKPDGGGAPNGVRNGLAAELGPASPRRA VRNGLAAELGPASPRRAGALRRNSLTGEEG R N G P R R 3 1 1 0 0 0 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 0 1251.6571 Q9BX95 Q9BX95 91 103 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 0.0017336 122.33 By MS/MS 1 0 1 1 156650 156650 0 10538 2400 11011 26144 18488 18488 1 7653.7 0 NGLDVLFK RIQNMRMIDGKPEYKNGLDVLFKVVRYEGF DGKPEYKNGLDVLFKVVRYEGFFSLWKGFT K N G F K V 0 0 1 1 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 904.50182 Q02978 Q02978 261 268 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.0037836 144.12 By MS/MS 5.5 3.59 1 1 1 1 1 1 6 21139000 21139000 0 10539 1260 11012 26145;26146;26147;26148;26149;26150 18489;18490 18490 2 1523400 0 NGLVLFGNDGK PLEIKGAKKPGLVTKNGLVLFGNDGKALTV LVTKNGLVLFGNDGKALTVRNLQFEDGKMI K N G G K A 0 0 2 1 0 0 0 3 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1132.5877 Q3SY69 Q3SY69 296 306 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.00013108 157.75 By MS/MS 4.5 0.5 1 1 2 1379000 1379000 0 10540 1570 11013 26151;26152 18491 18491 1 39688 0 NGNLPEFGDAISTASK KVLGEAMTGISQNAKNGNLPEFGDAISTAS GNLPEFGDAISTASKALCGFTEAAAQAAYL K N G S K A 2 0 2 1 0 0 1 2 0 1 1 1 0 1 1 2 1 0 0 0 0 0 16 0 1619.7791 Q9Y490 Q9Y490 1416 1431 TLN1 Talin-1 yes yes 2 0.00088399 119.21 By MS/MS 2.5 0.5 1 1 2 944420 944420 0 10541 2947 11014 26153;26154 18492 18492 1 36563 0 NGPLPIPSEGSGFTK LLAIAACTALGEIGRNGPLPIPSEGSGFTK NGPLPIPSEGSGFTKLHLVESLLSRIPSSK R N G T K L 0 0 1 0 0 0 1 3 0 1 1 1 0 1 3 2 1 0 0 0 0 0 15 0 1499.762 Q5VYK3 Q5VYK3 823 837 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.050366 78.964 By MS/MS 3 0 1 1 1717800 1717800 0 10542 1657 11015 26155 18493 18493 1 44842 0 NGQDLGVAFK FANFESDEVELSYAKNGQDLGVAFKISKEV LSYAKNGQDLGVAFKISKEVLAGRPLFPHV K N G F K I 1 0 1 1 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1047.5349 Q00839 Q00839 424 433 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.00076161 157.34 By MS/MS 4 0 1 1 1102800 1102800 0 10543 1238 11016 26156 18494 18494 1 30106 0 NGQYAEASALYGR DSVEELRAAGNESFRNGQYAEASALYGRAL FRNGQYAEASALYGRALRVLQAQGSSDPEE R N G G R A 3 1 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 0 2 0 0 0 13 0 1398.6528 Q15785 Q15785 22 34 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 6.5699E-08 229.68 By MS/MS 8 0 1 1 1334400 1334400 0 10544 1521 11017 26157 18495 18495 1 88029 0 NGRVEIIANDQGNR GIDLGTTYSCVGVFKNGRVEIIANDQGNRI KNGRVEIIANDQGNRITPSYVAFTPEGERL K N G N R I 1 2 3 1 0 1 1 2 0 2 0 0 0 0 0 0 0 0 0 1 0 0 14 1 1554.7863 P11021 P11021 47 60 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0020095 106.52 By MS/MS 5 0 1 1 4546900 4546900 0 10545 545 11018 26158 18496 18496 1 186900 0 NGSFANLR HTWQDHGYLATYTNKNGSFANLRIYPHGLV LATYTNKNGSFANLRIYPHGLVLLDLQSYD K N G L R I 1 1 2 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 877.44061 P52788 P52788 55 62 SMS Spermine synthase yes yes 2 0.039336 95.531 By MS/MS 7 0 1 1 816100 816100 0 10546 991 11019 26159 18497 18497 1 14584 0 NGTEDLPYAMKPIDYYTETK LTSSASVIFEGVDIKNGTEDLPYAMKPIDY LPYAMKPIDYYTETKILQERAVLGANDPEK K N G T K I 1 0 1 2 0 0 2 1 0 1 1 2 1 0 2 0 3 0 3 0 0 0 20 1 2348.0882 Q15738 Q15738 157 176 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3 0.0082854 64.2 By MS/MS 7 0 1 1 1061300 1061300 0 10547 1515 11020 26160 18498 18498 1164 1 18965 0 NGVFVDGVFQR RPDAGGDFYLRCLGKNGVFVDGVFQRRGAP CLGKNGVFVDGVFQRRGAPPLQLPRVCTFR K N G Q R R 0 1 1 1 0 1 0 2 0 0 0 0 0 2 0 0 0 0 0 3 0 0 11 0 1236.6251 Q01167 Q01167 119 129 FOXK2 Forkhead box protein K2 yes yes 2 0.0025616 112.85 By MS/MS 5 0 1 1 0 0 0 10548 1240 11021 26161 18499 18499 1 0 0 NGVPAVGLK MYGYPNRNWKDAGLKNGVPAVGLKLNDLIQ KDAGLKNGVPAVGLKLNDLIQRLQLCYQLT K N G L K L 1 0 1 0 0 0 0 2 0 0 1 1 0 0 1 0 0 0 0 2 0 0 9 0 853.50215 P53621 P53621 994 1002 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.045053 82.671 By MS/MS 1 0 1 1 153450 153450 0 10549 1005 11022 26162 18500 18500 1 7497 0 NGYAPVEFFLEGTR LYWAVFSEYVKTMLRNGYAPVEFFLEGTRS RNGYAPVEFFLEGTRSRSAKTLTPKFGLLN R N G T R S 1 1 1 0 0 0 2 2 0 0 1 0 0 2 1 0 1 0 1 1 0 0 14 0 1598.7729 O15228 O15228 233 246 GNPAT Dihydroxyacetone phosphate acyltransferase yes yes 2 0.00066787 129.74 By MS/MS 5 0 1 1 169280 169280 0 10550 160 11023 26163 18501 18501 1 6958.2 0 NGYELSPTAAANFTR FAEYIQKNVQLYKMRNGYELSPTAAANFTR NGYELSPTAAANFTRRNLADCLRSRTPYHV R N G T R R 3 1 2 0 0 0 1 1 0 0 1 0 0 1 1 1 2 0 1 0 0 0 15 0 1610.7689 P49721 P49721 71 85 PSMB2 Proteasome subunit beta type-2 yes yes 2 4.8733E-50 283.05 By MS/MS 9.5 0.5 1 1 2 2694000 2694000 0 10551 927 11024 26164;26165 18502 18502 1 1577000 0 NHAAPFSK HDSEDTEGVHEVFSRNHAAPFSKVLTFLRR VHEVFSRNHAAPFSKVLTFLRRGPFELEAF R N H S K V 2 0 1 0 0 0 0 0 1 0 0 1 0 1 1 1 0 0 0 0 0 0 8 0 870.4348 Q92598;P34932 Q92598 423 430 HSPH1;HSPA4 Heat shock protein 105 kDa;Heat shock 70 kDa protein 4 no no 2 0.0080258 125.81 By MS/MS By matching 4 0 2 1 1 641560 636070 5488.9 10552 2063;778 11025 26166;26167 18503 18503 1 17364 11469 NHDEESLECLCR LTEAIMHDCVVKLLKNHDEESLECLCRLLT LLKNHDEESLECLCRLLTTIGKDLDFEKAK K N H C R L 0 1 1 1 2 0 3 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1560.6297 Q04637;O43432 Q04637 926 937 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 2;3 4.6661E-17 261.35 By MS/MS 3 1.22 1 2 2 2 1 8 12531000 12531000 0 10553 1264;200 11026 26168;26169;26170;26171;26172;26173;26174;26175 18504;18505;18506;18507;18508 18505 5 532600 0 NHEEEMKDLR MQIESLTEELAYLKKNHEEEMKDLRNVSTG AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP K N H L R N 0 1 1 1 0 0 3 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 10 1 1299.5877 CON__P13645;P13645 CON__P13645 286 295 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.0015828 112.11 By MS/MS By MS/MS 5.12 2.76 3 2 4 3 3 2 3 2 2 2 12 14 11744000 5324500 6419100 + 10554 49 11027;11028 26176;26177;26178;26179;26180;26181;26182;26183;26184;26185;26186;26187;26188;26189;26190;26191;26192;26193;26194;26195;26196;26197;26198;26199;26200;26201 18509;18510;18511;18512;18513;18514;18515;18516;18517;18518;18519;18520;18521;18522;18523;18524;18525;18526;18527;18528 18514 31 20 1019900 17985000 NHIENQDECVLNVISHAR EGLPEKVLSLVDDPRNHIENQDECVLNVIS ENQDECVLNVISHARLWQTTEEIPKRETYC R N H A R L 1 1 3 1 1 1 2 0 2 2 1 0 0 0 0 1 0 0 0 2 0 0 18 0 2147.0178 Q9BZE1 Q9BZE1 145 162 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 3 5.8858E-05 132.5 By MS/MS 7 0 1 1 864190 864190 0 10555 2420 11029 26202 18529 18529 1 15443 0 NHIQLVK AAYQTGADQASITARNHIQLVKLQVEEVHQ DQASITARNHIQLVKLQVEEVHQLSRKAET R N H V K L 0 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 850.50249 Q9NR28 Q9NR28 185 191 DIABLO Diablo homolog, mitochondrial yes yes 2 0.021238 122.98 By MS/MS 9 0 1 1 216020 216020 0 10556 2598 11030 26203 18530 18530 1 123970 0 NIAFFSTNCVEGTAR TRSPDFTNENPLETRNIAFFSTNCVEGTAR NIAFFSTNCVEGTARGIVVYTGDRTVMGRI R N I A R G 2 1 2 0 1 0 1 1 0 1 0 0 0 2 0 1 2 0 0 1 0 0 15 0 1685.7832 P05023 P05023 241 255 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 1.0102E-20 225.72 By MS/MS 2.5 1.12 1 1 1 1 4 1060200 1060200 0 10557 463 11031 26204;26205;26206;26207 18531;18532 18531 2 43352 0 NIANPTAMLLSASNMLR FETGARHPFAQAVGRNIANPTAMLLSASNM ANPTAMLLSASNMLRHLNLEYHSSMIADAV R N I L R H 3 1 3 0 0 0 0 0 0 1 3 0 2 0 1 2 1 0 0 0 0 0 17 0 1815.9335 O43837 O43837 318 334 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2 0.053859 77.192 By MS/MS 7 0 1 1 311230 311230 0 10558 230 11032 26208 18533 18533 0 5561.8 0 NICFTVWDVGGQDK TIPTIGFNVETVEYKNICFTVWDVGGQDKI KNICFTVWDVGGQDKIRPLWRHYFQNTQGL K N I D K I 0 0 1 2 1 1 0 2 0 1 0 1 0 1 0 0 1 1 0 2 0 0 14 0 1637.7508 P84085 P84085 60 73 ARF5 ADP-ribosylation factor 5 yes yes 2 5.0891E-08 185.57 By MS/MS 9.5 0.5 1 1 2 329570 329570 0 10559 1215 11033 26209;26210 18534 18534 1 210480 0 NICFTVWDVGGQDR TIPTIGFNVETVEYKNICFTVWDVGGQDRI KNICFTVWDVGGQDRIRPLWKHYFQNTQGL K N I D R I 0 1 1 2 1 1 0 2 0 1 0 0 0 1 0 0 1 1 0 2 0 0 14 0 1665.7569 P18085 P18085 60 73 ARF4 ADP-ribosylation factor 4 yes yes 2 5.9691E-18 219.74 By MS/MS 9.5 0.5 1 1 2 872550 872550 0 10560 621 11034 26211;26212 18535;18536;18537 18535 3 560700 0 NICQQVNIK LRKSHLAKEGLYQYKNICQQVNIKSLEDVV GLYQYKNICQQVNIKSLEDVVRAYLKMAEE K N I I K S 0 0 2 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 9 0 1115.5757 Q14152 Q14152 76 84 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 2.6802E-07 194.25 By MS/MS By matching 2.67 0.943 1 1 3 1 5 1 29543000 29442000 101400 10561 1409 11035 26213;26214;26215;26216;26217;26218 18538;18539;18540;18541 18540 4 794260 145330 NIDINDVTPNCR VKVHPEGKFVVDVDKNIDINDVTPNCRVAL VDKNIDINDVTPNCRVALRNDSYTLHKILP K N I C R V 0 1 3 2 1 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 12 0 1429.662 P62195 P62195 102 113 PSMC5 26S protease regulatory subunit 8 yes yes 2 8.6833E-05 157.97 By MS/MS 7 0 1 1 2463600 2463600 0 10562 1117 11036 26219 18542 18542 1 44025 0 NIEDVIAQGIGK DDDRLNKVISELNGKNIEDVIAQGIGKLAS NGKNIEDVIAQGIGKLASVPAGGAVAVSAA K N I G K L 1 0 1 1 0 1 1 2 0 3 0 1 0 0 0 0 0 0 0 1 0 0 12 0 1255.6772 P05387 P05387 50 61 RPLP2 60S acidic ribosomal protein P2 yes yes 2 1.4817E-16 221.59 By MS/MS 10 0 1 1 1591100 1591100 0 10563 472 11037 26220 18543 18543 1 1691200 0 NIEEHASADVEK ITNEKSFDNIRNWIRNIEEHASADVEKMIL WIRNIEEHASADVEKMILGNKCDVNDKRQV R N I E K M 2 0 1 1 0 0 3 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 12 0 1340.6208 P61006 P61006 105 116 RAB8A Ras-related protein Rab-8A yes yes 2 1.056E-23 234.24 By MS/MS By matching 9 0 2 1 1 597660 580430 17231 10564 1080 11038 26221;26222 18544 18544 1 333110 185700 NIEEILTAR IADNLGWFSDLNGKRNIEEILTARGEQVHR DLNGKRNIEEILTARGEQVHRVAGEGALEL R N I A R G 1 1 1 0 0 0 2 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1057.5768 Q5SXM8 Q5SXM8 124 132 DNLZ DNL-type zinc finger protein yes yes 2 1.5299E-08 210.6 By MS/MS 10 0 1 1 949150 949150 0 10565 1623 11039 26223 18545 18545 1 1008800 0 NIEIDSPYEISR IDSLTVKIILPEGAKNIEIDSPYEISRAPD GAKNIEIDSPYEISRAPDELHYTYLDTFGR K N I S R A 0 1 1 1 0 0 2 0 0 3 0 0 0 0 1 2 0 0 1 0 0 0 12 0 1434.6991 P04843 P04843 380 391 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 4.2104E-05 193.62 By MS/MS 3.4 1.85 1 1 1 1 1 5 15566000 15566000 0 10566 458 11040 26224;26225;26226;26227;26228 18546;18547;18548 18546 3 583630 0 NIELICQENEGENDPVLQR EDLEKERDFYFGKLRNIELICQENEGENDP ICQENEGENDPVLQRIVDILYATDEGFVIP R N I Q R I 0 1 3 1 1 2 4 1 0 2 2 0 0 0 1 0 0 0 0 1 0 0 19 0 2269.0645 Q15691 Q15691 223 241 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2;3 7.2273E-13 226.39 By MS/MS 8 0 2 2 3078100 3078100 0 10567 1513 11041 26229;26230 18549;18550 18549 2 203060 0 NIEMTQEDVR DRGPVLEALVARAIRNIEMTQEDVRLIGLS ARAIRNIEMTQEDVRLIGLSATLPNYEDVA R N I V R L 0 1 1 1 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1233.566 O75643 O75643 638 647 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 7.894E-12 213.8 By MS/MS 1.5 0.5 2 2 4 1229700 1229700 0 10568 322 11042;11043 26231;26232;26233;26234 18551;18552;18553;18554 18553 181 4 60683 0 NIFAILQSVK TRTTILQSTGKNFSKNIFAILQSVKAREEG KNFSKNIFAILQSVKAREEGRAPEQRPAPN K N I V K A 1 0 1 0 0 1 0 0 0 2 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1131.6652 Q6P1J9 Q6P1J9 248 257 CDC73 Parafibromin yes yes 2 7.2414E-07 186.41 By MS/MS 6 0 1 1 701900 701900 0 10569 1699 11044 26235 18555 18555 1 5473.4 0 NIFIECTGTDFTK PIINGDHSRITVNTRNIFIECTGTDFTKAK TRNIFIECTGTDFTKAKIVLDIIVTMFSEY R N I T K A 0 0 1 1 1 0 1 1 0 2 0 1 0 2 0 0 3 0 0 0 0 0 13 0 1544.7181 Q9NSD9 Q9NSD9 250 262 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 1.6329E-07 181.66 By MS/MS 5 0 1 1 811010 811010 0 10570 2623 11045 26236 18556 18556 1 33336 0 NIFLQYASTEVDGER VKVQTTKRGDPHELRNIFLQYASTEVDGER NIFLQYASTEVDGERYMTPEDFVQRYLGLY R N I E R Y 1 1 1 1 0 1 2 1 0 1 1 0 0 1 0 1 1 0 1 1 0 0 15 0 1740.8319 O75746 O75746 18 32 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 4.9714E-50 282.92 By MS/MS 5 0 1 1 616420 616420 0 10571 327 11046 26237 18557 18557 1 25337 0 NIFSVPEIVR VVQHSQLAAAVENLKNIFSVPEIVRETQDL VENLKNIFSVPEIVRETQDLIEQGALLQAH K N I V R E 0 1 1 0 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 2 0 0 10 0 1172.6554 O60645 O60645 118 127 EXOC3 Exocyst complex component 3 yes yes 2 0.034198 82.645 By MS/MS 5 0 1 1 205730 205730 0 10572 256 11047 26238 18558 18558 1 8456.4 0 NIGFSHLQQR PIARRVPFLKNKGSRNIGFSHLQQRSAQEI NKGSRNIGFSHLQQRSAQEIVHCVFQLLTP R N I Q R S 0 1 1 0 0 2 0 1 1 1 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1198.6207 Q9BXW9 Q9BXW9 998 1007 FANCD2 Fanconi anemia group D2 protein yes yes 2 0.0010125 122.28 By MS/MS 3 0 1 1 400160 400160 0 10573 2405 11048 26239 18559 18559 1 10446 0 NIGGQIQEK VSLEPKNKVFQEALRNIGGQIQEKVRYMSS FQEALRNIGGQIQEKVRYMSSTDAKVEQMF R N I E K V 0 0 1 0 0 2 1 2 0 2 0 1 0 0 0 0 0 0 0 0 0 0 9 0 985.51926 Q9H3U1 Q9H3U1 134 142 UNC45A Protein unc-45 homolog A yes yes 2 0.0026132 123.21 By MS/MS By matching 4 0 2 1 1 4302000 4277200 24852 10574 2493 11049 26240;26241 18560 18560 1 116760 51930 NIGISAHIDSGK CRWSSSGVIPNEKIRNIGISAHIDSGKTTL KIRNIGISAHIDSGKTTLTERVLYYTGRIA R N I G K T 1 0 1 1 0 0 0 2 1 3 0 1 0 0 0 2 0 0 0 0 0 0 12 0 1210.6306 Q96RP9 Q96RP9 48 59 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0089458 98.182 By MS/MS 5 0.816 1 1 1 3 2594900 2594900 0 10575 2247 11050 26242;26243;26244 18561 18561 1 67634 0 NIGVDNPAAK DASLMVTNDGATILKNIGVDNPAAKVLVDM ATILKNIGVDNPAAKVLVDMSRVQDDEVGD K N I A K V 2 0 2 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 1 0 0 10 0 997.51926 P78371 P78371 73 82 CCT2 T-complex protein 1 subunit beta yes yes 2 0.018221 93.598 By MS/MS 5.5 0.5 1 1 2 131130000 131130000 0 10576 1195 11051 26245;26246 18562 18562 1 1038300 0 NIGVVVVGFPATPIIESR MPAKIGAFGREMLKRNIGVVVVGFPATPII VVVVGFPATPIIESRARFCLSAAHTKEILD R N I S R A 1 1 1 0 0 0 1 2 0 3 0 0 0 1 2 1 1 0 0 4 0 0 18 0 1867.0567 O15270 O15270 490 507 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 5.932E-09 157.86 By MS/MS 6 0 1 1 4002600 4002600 0 10577 166 11052 26247 18563 18563 1 31213 0 NIIGYFEQK IRDLAEITTLDRSKRNIIGYFEQKDSDNYR LDRSKRNIIGYFEQKDSDNYRVFERVANIL R N I Q K D 0 0 1 0 0 1 1 1 0 2 0 1 0 1 0 0 0 0 1 0 0 0 9 0 1110.571 Q9BS26 Q9BS26 162 170 ERP44 Endoplasmic reticulum resident protein 44 yes yes 2 0.030852 90.601 By MS/MS 7 0 1 1 1157000 1157000 0 10578 2334 11053 26248 18564 18564 1 20675 0 NIIHGSDSVESAEK KPGTIRGDFCIQVGRNIIHGSDSVESAEKE RNIIHGSDSVESAEKEIGLWFHPEELVDYT R N I E K E 1 0 1 1 0 0 2 1 1 2 0 1 0 0 0 3 0 0 0 1 0 0 14 0 1484.7107 P15531 P15531 115 128 NME1 Nucleoside diphosphate kinase A yes yes 2;3 3.1527E-06 174.21 By MS/MS 9.5 0.5 2 2 4 2133800 2133800 0 10579 599 11054 26249;26250;26251;26252 18565;18566;18567 18567 3 1911500 0 NIIHGSDSVK KPGTIRGDFCIQVGRNIIHGSDSVKSAEKE IQVGRNIIHGSDSVKSAEKEISLWFKPEEL R N I V K S 0 0 1 1 0 0 0 1 1 2 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1068.5564 P22392;O60361 P22392 115 124 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2;3 0.00011045 164.46 By MS/MS 10 0 2 2 3198900 3198900 0 10580 659 11055 26253;26254 18568;18569 18568 2 3400100 0 NIIIALIDR FLRACAELHQNVNVKNIIIALIDRLALFAH QNVNVKNIIIALIDRLALFAHREDGPGIPA K N I D R L 1 1 1 1 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1039.639 Q96QK1 Q96QK1 297 305 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.0047323 116.3 By MS/MS 5 0.816 1 1 1 3 2573000 2573000 0 10581 2242 11056 26255;26256;26257 18570;18571 18570 2 61467 0 NILDLVNEFPEK LFYSAKNTSELLFKKNILDLVNEFPEKIAC FKKNILDLVNEFPEKIACSLHVTKQTTQIN K N I E K I 0 0 2 1 0 0 2 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 12 0 1429.7453 Q96HP4 Q96HP4 227 238 OXNAD1 Oxidoreductase NAD-binding domain-containing protein 1 yes yes 2 0.0045582 108.35 By MS/MS 8 0 1 1 80166 80166 0 10582 2194 11057 26258 18572 18572 1 5288.5 0 NILEESLCELVAK AEVLGLILRYVMERKNILEESLCELVAKQL RKNILEESLCELVAKQLKQHQNTMEDKFIV K N I A K Q 1 0 1 0 1 0 3 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 13 0 1516.7807 P78527 P78527 2335 2347 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00019726 166.7 By MS/MS 2.5 1.12 1 1 1 1 4 385440 385440 0 10583 1197 11058 26259;26260;26261;26262 18573;18574;18575;18576;18577 18573 5 15732 0 NILETLLQMK ADMEEYIWENSSSERNILETLLQMKAAEKN SSSERNILETLLQMKAAEKNMEINKEELLG R N I M K A 0 0 1 0 0 1 1 0 0 1 3 1 1 0 0 0 1 0 0 0 0 0 10 0 1201.674 P82673 P82673 261 270 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 2 1.0559E-15 215.93 By MS/MS 7.33 0.471 2 1 3 2144000 2144000 0 10584 1204 11059 26263;26264;26265 18578;18579;18580 18578 990 2 45235 0 NILGGTVFR FKLKKMWKSPNGTIRNILGGTVFREPIICK PNGTIRNILGGTVFREPIICKNIPRLVPGW R N I F R E 0 1 1 0 0 0 0 2 0 1 1 0 0 1 0 0 1 0 0 1 0 0 9 0 975.55016 P48735;O75874 P48735 141 149 IDH2;IDH1 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] cytoplasmic yes no 2 0.012004 101.25 By MS/MS 7 0 1 1 1118700 1118700 0 10585 912 11060 26266 18581 18581 1 19992 0 NILIDFTK YEKMISGMYLGEIVRNILIDFTKKGFLFRG YLGEIVRNILIDFTKKGFLFRGQISETLKT R N I T K K 0 0 1 1 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 0 8 0 962.54368 P19367;P52789 P19367 756 763 HK1;HK2 Hexokinase-1;Hexokinase-2 no no 2 0.031567 98.582 By MS/MS 4.5 0.5 1 1 2 3029300 3029300 0 10586 630;992 11061 26267;26268 18582 18582 1 84784 0 NILIDFTKK YEKMISGMYLGEIVRNILIDFTKKGFLFRG LGEIVRNILIDFTKKGFLFRGQISETLKTR R N I K K G 0 0 1 1 0 0 0 0 0 2 1 2 0 1 0 0 1 0 0 0 0 0 9 1 1090.6386 P19367 P19367 756 764 HK1 Hexokinase-1 yes yes 2 0.02576 112.11 By MS/MS 4 0 1 1 733320 733320 0 10587 630 11062 26269 18583 18583 1 20019 0 NILLTNEQLESAR FIGRANHFFTVTDPRNILLTNEQLESARKI PRNILLTNEQLESARKIVHDYRQGIVPPGL R N I A R K 1 1 2 0 0 1 2 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 13 0 1499.7944 Q9H9B4 Q9H9B4 36 48 SFXN1 Sideroflexin-1 yes yes 2 3.5294E-59 303.33 By MS/MS By MS/MS 7.43 2.72 1 4 1 1 6 1 213840000 213470000 370800 10588 2533 11063 26270;26271;26272;26273;26274;26275;26276 18584;18585;18586;18587;18588;18589 18586 6 16144000 3163400 NILLTNEQLESARK FIGRANHFFTVTDPRNILLTNEQLESARKI RNILLTNEQLESARKIVHDYRQGIVPPGLT R N I R K I 1 1 2 0 0 1 2 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 14 1 1627.8893 Q9H9B4 Q9H9B4 36 49 SFXN1 Sideroflexin-1 yes yes 2 4.8937E-12 210.95 By MS/MS 8 0.816 1 1 1 3 14643000 14643000 0 10589 2533 11064 26277;26278;26279 18590 18590 1 980110 0 NILMYGPPGTGK AIATRNTKKNRSLYRNILMYGPPGTGKTLF LYRNILMYGPPGTGKTLFAKKLALHSGMDY R N I G K T 0 0 1 0 0 0 0 3 0 1 1 1 1 0 2 0 1 0 1 0 0 0 12 0 1246.638 Q9NVI7 Q9NVI7 395 406 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.0005356 135.8 By MS/MS 5 0 2 2 3008200 3008200 0 10590 2655 11065;11066 26280;26281 18591;18592 18591 1568 2 123650 0 NINIGDISIK AVSAVKNMNLPEIPRNINIGDISIKVPNLP PEIPRNINIGDISIKVPNLPSFK_______ R N I I K V 0 0 2 1 0 0 0 1 0 4 0 1 0 0 0 1 0 0 0 0 0 0 10 0 1085.6081 Q92572 Q92572 176 185 AP3S1 AP-3 complex subunit sigma-1 yes yes 2 0.0027007 114.97 By MS/MS 9 0.816 1 1 1 3 655150 655150 0 10591 2060 11067 26282;26283;26284 18593 18593 1 338480 0 NINLIVQK TLLSAEPELQYVALRNINLIVQKRPEILKH LQYVALRNINLIVQKRPEILKHEMKVFFVK R N I Q K R 0 0 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 940.57057 P63010;Q10567 Q10567 305 312 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 0.03979 95.352 By MS/MS 4 0 1 1 1421300 1421300 0 10592 1300;1167 11068 26285 18594 18594 1 38801 0 NIPGITLLNVSK CIIYNEDNGIIKAFRNIPGITLLNVSKLNI AFRNIPGITLLNVSKLNILKLAPGGHVGRF R N I S K L 0 0 2 0 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1267.75 P36578 P36578 223 234 RPL4 60S ribosomal protein L4 yes yes 2 0.019785 86.114 By MS/MS 6.5 0.5 1 1 2 2374300 2374300 0 10593 808 11069 26286;26287 18595 18595 1 23648 0 NIPMTLELLQSTR KKNAAGALDLLKELKNIPMTLELLQSTRIG LKNIPMTLELLQSTRIGMSVNAIRKQSTDE K N I T R I 0 1 1 0 0 1 1 0 0 1 3 0 1 0 1 1 2 0 0 0 0 0 13 0 1514.8127 P23193 P23193 33 45 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0022382 112.84 By MS/MS 7 0 1 1 392210 392210 0 10594 664 11070 26288 18596 18596 447 1 7008.9 0 NIQACKELAQTTR EGAKHFSGLEEAVYRNIQACKELAQTTRTA YRNIQACKELAQTTRTAYGPNGMNKMVINH R N I T R T 2 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 2 0 0 0 0 0 13 1 1531.7777 P50990 P50990 32 44 CCT8 T-complex protein 1 subunit theta yes yes 2;3 1.423E-16 246.56 By MS/MS 6.2 0.748 1 2 2 5 24213000 24213000 0 10595 955 11071 26289;26290;26291;26292;26293 18597;18598 18597 2 202600 0 NIQHINR GVQKFDLGIICVDNKNIQHINRIYRDRNVP GIICVDNKNIQHINRIYRDRNVPTDVLSFP K N I N R I 0 1 2 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 7 0 893.48315 P58557 P58557 46 52 YBEY Putative ribonuclease yes yes 2 0.050496 101.21 By MS/MS 10 0 1 1 118750 118750 0 10596 1061 11072 26294 18599 18599 1 126220 0 NIQQYNSFVSLSV RFERVLGPCSDILKRNIQQYNSFVSLSV__ KRNIQQYNSFVSLSV_______________ R N I S V - 0 0 2 0 0 2 0 0 0 1 1 0 0 1 0 3 0 0 1 2 0 0 13 0 1497.7464 P10644 P10644 369 381 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 1.3393E-11 198.62 By MS/MS 6 0 1 1 819060 819060 0 10597 542 11073 26295 18600 18600 1 6387 0 NIQVSHQEFSK TKVQESLKKQEGLLKNIQVSHQEFSKMKQS GLLKNIQVSHQEFSKMKQSNNEANLREEVL K N I S K M 0 0 1 0 0 2 1 0 1 1 0 1 0 1 0 2 0 0 0 1 0 0 11 0 1315.6521 Q8WUM4 Q8WUM4 628 638 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.0012819 129.88 By MS/MS 4 0 1 1 585940 585940 0 10598 2019 11074 26296 18601 18601 1 15995 0 NIRDDEGFIIR FRLTIPRKSKLAVHRNIRDDEGFIIRHFAG AVHRNIRDDEGFIIRHFAGAVCYETTQFVE R N I I R H 0 2 1 2 0 0 1 1 0 3 0 0 0 1 0 0 0 0 0 0 0 0 11 1 1346.6943 Q9UM54 Q9UM54 570 580 MYO6 Unconventional myosin-VI yes yes 2 0.032273 110.38 By MS/MS 3 0 1 1 1069600 1069600 0 10599 2833 11075 26297 18602 18602 1 27921 0 NIRDNEEKDSAFR PMLQQFIRPWCTSLRNIRDNEEKDSAFRGI LRNIRDNEEKDSAFRGICTMISVNPSGVIQ R N I F R G 1 2 2 2 0 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 13 2 1592.7543 Q92973;O14787 Q92973 811 823 TNPO1;TNPO2 Transportin-1;Transportin-2 yes no 3 0.0035342 103.97 By MS/MS 4 0 1 1 2354700 2354700 0 10600 2093 11076 26298 18603 18603 1 64282 0 NISFTVWDVGGQDK TIPTIGFNVETVEYKNISFTVWDVGGQDKI KNISFTVWDVGGQDKIRPLWRHYFQNTQGL K N I D K I 0 0 1 2 0 1 0 2 0 1 0 1 0 1 0 1 1 1 0 2 0 0 14 0 1564.7522 P84077;P61204 P84077 60 73 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 7.1265E-18 217.12 By MS/MS 9.5 0.5 1 1 2 1920500 1920500 0 10601 1093 11077 26299;26300 18604;18605 18604 2 1271900 0 NITLDDASAPR AVAAPRPDRLVNRLKNITLDDASAPRLMVL NRLKNITLDDASAPRLMVLRQPRGPDNSMG K N I P R L 2 1 1 2 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1171.5833 O75534 O75534 759 769 CSDE1 Cold shock domain-containing protein E1 yes yes 2 1.6025E-16 228.98 By MS/MS 4.5 0.5 1 1 2 4217400 4217400 0 10602 316 11078 26301;26302 18606;18607 18607 2 173350 0 NITQTLMDTLK ESILASERLPFSCLRNITQTLMDTLKSQEL SCLRNITQTLMDTLKSQELESVDEGLLQFC R N I L K S 0 0 1 1 0 1 0 0 0 1 2 1 1 0 0 0 3 0 0 0 0 0 11 0 1276.6697 Q9H2M9 Q9H2M9 611 621 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 7.2388E-07 176.95 By MS/MS 3 0 2 2 614940 614940 0 10603 2481 11079;11080 26303;26304 18608;18609 18608 1512 2 16053 0 NITYEELR VQGPDPNLEESPKRKNITYEELRNKNRESY EESPKRKNITYEELRNKNRESYEVSLTQKT K N I L R N 0 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 1036.5189 Q9NX40 Q9NX40 196 203 OCIAD1 OCIA domain-containing protein 1 yes yes 2 0.051888 90.601 By MS/MS 7 0 1 1 3268200 3268200 0 10604 2678 11081 26305 18610 18610 1 58404 0 NITYLPAGQSVLLQLPQ LEAAEDIAYQLSRSRNITYLPAGQSVLLQL TYLPAGQSVLLQLPQ_______________ R N I P Q - 1 0 1 0 0 3 0 1 0 1 4 0 0 0 2 1 1 0 1 1 0 0 17 0 1854.0251 P35232 P35232 256 272 PHB Prohibitin yes yes 2 0.00043391 122.52 By MS/MS 8.5 0.5 1 1 2 578200 578200 0 10605 782 11082 26306;26307 18611;18612 18612 2 55906 0 NIVEAAAVR RCVPKDKAIKKFVIRNIVEAAAVRDISEAS KKFVIRNIVEAAAVRDISEASVFDAYVLPK R N I V R D 3 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 9 0 941.52943 P62854;Q5JNZ5 P62854 43 51 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 2 0.0010574 140.83 By MS/MS 10 0 1 1 7785200 7785200 0 10606 1151 11083 26308 18613 18613 1 8274800 0 NIVSDCSAFVK SGTTGNPKGAMVTHRNIVSDCSAFVKATEN VTHRNIVSDCSAFVKATENTVNPCPDDTLI R N I V K A 1 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 0 0 0 2 0 0 11 0 1238.5965 P33121 P33121 292 302 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.0048019 118.03 By MS/MS 5 0 1 1 1999700 1999700 0 10607 766 11084 26309 18614 18614 1 82194 0 NIYVLQELDNPGAK VFYGTEKDKNSVNFKNIYVLQELDNPGAKR KNIYVLQELDNPGAKRILELDQFKGQQGQK K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 P12956 P12956 101 114 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 3.7128E-46 294.49 By MS/MS 5 0 1 1 4894100 4894100 0 10608 569 11085 26310 18615 18615 1 201170 0 NIYYLCAPNR TSLSEYASRMRAGTRNIYYLCAPNRHLAEH RAGTRNIYYLCAPNRHLAEHSPYYEAMKKK R N I N R H 1 1 2 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 0 10 0 1282.6128 Q12931 Q12931 496 505 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 0.00012992 162.25 By MS/MS By MS/MS 5.75 0.829 2 1 1 3 1 14090000 14063000 27694 10609 1316 11086 26311;26312;26313;26314 18616;18617 18617 2 517030 81946 NKDQGTYEDYVEGLR LDFEHFLPMLQTVAKNKDQGTYEDYVEGLR NKDQGTYEDYVEGLRVFDKEGNGTVMGAEI K N K L R V 0 1 1 2 0 1 2 2 0 0 1 1 0 0 0 0 1 0 2 1 0 0 15 1 1785.817 P60660 P60660 80 94 MYL6 Myosin light polypeptide 6 yes yes 3 0.014389 75.376 By MS/MS 10 0 1 1 502120 502120 0 10610 1071 11087 26315 18618 18618 1 533700 0 NKDSNSIIKDR ENSSSTNLCVEDLQKNKDSNSIIKDRLSET DLQKNKDSNSIIKDRLSETVRQNTKFFFDP K N K D R L 0 1 2 2 0 0 0 0 0 2 0 2 0 0 0 2 0 0 0 0 0 0 11 2 1288.6735 Q9NRZ9 Q9NRZ9 176 186 HELLS Lymphoid-specific helicase yes yes 3 0.037267 86.189 By MS/MS 4 0 1 1 624570 624570 0 10611 2619 11088 26316 18619 18619 0 17050 0 NKEEAAEYAK HKRRRIALKKQRTKKNKEEAAEYAKLLAKR QRTKKNKEEAAEYAKLLAKRMKEAKEKRQE K N K A K L 3 0 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 10 1 1151.5459 P62753 P62753 202 211 RPS6 40S ribosomal protein S6 yes yes 2 0.002591 150.81 By MS/MS By matching 8.33 0.471 2 1 2 1 7051100 6994500 56685 10612 1143 11089 26317;26318;26319 18620 18620 1 482580 483590 NKEGLHNAK TRGKFNTSDVSAIEKNKEGLHNAKEILTRL VSAIEKNKEGLHNAKEILTRLGVEPSDDDC K N K A K E 1 0 2 0 0 0 1 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 9 1 1009.5305 P19367 P19367 345 353 HK1 Hexokinase-1 yes yes 2;3 0.0075854 141.52 By MS/MS 4 0 2 2 1076900 1076900 0 10613 630 11090 26320;26321 18621;18622 18621 2 29397 0 NKEPPAPAQQLQPQPVAVQGPEPAR PAAVRAGPDEDLSHRNKEPPAPAQQLQPQP LQPQPVAVQGPEPARVEKIFTPAAPVHTNK R N K A R V 4 1 1 0 0 5 2 1 0 0 1 1 0 0 7 0 0 0 0 2 0 0 25 1 2646.3878 Q9HC07 Q9HC07 43 67 TMEM165 Transmembrane protein 165 yes yes 3 4.266E-08 119.28 By MS/MS 2.5 1.12 1 1 1 1 4 5281400 5281400 0 10614 2555 11091 26322;26323;26324;26325 18623;18624;18625;18626 18623 4 211670 0 NKEPPAPAQQLQPQPVAVQGPEPARVEK PAAVRAGPDEDLSHRNKEPPAPAQQLQPQP QPVAVQGPEPARVEKIFTPAAPVHTNKEDP R N K E K I 4 1 1 0 0 5 3 1 0 0 1 2 0 0 7 0 0 0 0 3 0 0 28 2 3002.5938 Q9HC07 Q9HC07 43 70 TMEM165 Transmembrane protein 165 yes yes 4 0.0044409 51.264 By MS/MS 1 0 1 1 451160 451160 0 10615 2555 11092 26326 18627 18627 1 22043 0 NKESVNKAQEEVTK SYESQIEVMAAEVAKNKESVNKAQEEVTKQ KNKESVNKAQEEVTKQKEVITAQDTVIKAK K N K T K Q 1 0 2 0 0 1 3 0 0 0 0 3 0 0 0 1 1 0 0 2 0 0 14 2 1602.8213 O95347 O95347 864 877 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 0.0043246 97.45 By MS/MS 2.5 0.5 1 1 2 927460 927460 0 10616 385 11093 26327;26328 18628 18628 1 24565 0 NKGNECFQK ERLAYINPDLALEEKNKGNECFQKGDYPQA LALEEKNKGNECFQKGDYPQAMKHYTEAIK K N K Q K G 0 0 2 0 1 1 1 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 9 1 1123.508 P31948 P31948 365 373 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.013213 128.36 By MS/MS 5 0 1 1 0 0 0 10617 762 11094 26329 18629 18629 1 0 0 NKITITNDQNR GILRVTAEDKGTGNKNKITITNDQNRLTPE TGNKNKITITNDQNRLTPEEIERMVNDAEK K N K N R L 0 1 3 1 0 1 0 0 0 2 0 1 0 0 0 0 2 0 0 0 0 0 11 1 1315.6844 P11021 P11021 522 532 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.01849 79.23 By MS/MS 5 0 1 1 602930 602930 0 10618 545 11095 26330 18630 18630 1 24783 0 NKKDELQSER KARVEELDRKYYEVKNKKDELQSERNYLWR YYEVKNKKDELQSERNYLWREENAEQQALA K N K E R N 0 1 1 1 0 1 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 10 2 1245.6313 Q9UQE7 Q9UQE7 460 469 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0051683 140.16 By MS/MS 3 0 1 1 230080 230080 0 10619 2860 11096 26331 18631 18631 1 6006.3 0 NKLAHSWVLQNMENWVER NPSQCLDWLAVQTPRNKLAHSWVLQNMENW AHSWVLQNMENWVERFLLAHNYPRVRTSAA R N K E R F 1 1 3 0 0 1 2 0 1 0 2 1 1 0 0 1 0 2 0 2 0 0 18 1 2253.1113 Q70CQ2 Q70CQ2 2653 2670 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 3 0.048718 53.21 By MS/MS 9 0 1 1 0 0 0 10620 1751 11097 26332 18632 18632 1 0 0 NKLEGLEDALQK ADAEQRGEMALKDAKNKLEGLEDALQKAKQ DAKNKLEGLEDALQKAKQDLARLLKEYQEL K N K Q K A 1 0 1 1 0 1 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 12 1 1356.7249 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 425 436 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.01749 136.49 By MS/MS 3 0 1 1 75701 0 75701 + 10621 36;53;449 11098 26333 18633 18633 1 0 108490 NKLNDLEDALQQAK SDAEQRGENALKDAKNKLNDLEDALQQAKE KNKLNDLEDALQQAKEDLARLLRDYQELMN K N K A K E 2 0 2 2 0 2 1 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 14 1 1598.8264 P04264;CON__P04264 P04264 442 455 KRT1 Keratin, type II cytoskeletal 1 no no 2 2.0829E-06 166.45 By MS/MS 9.5 0.5 1 1 2 194340 194340 0 + 10622 450;45 11099 26334;26335 18634 18634 0 137860 0 NKNPAPPIDAVEQILPTLVR GYLRNLTWTLSNLCRNKNPAPPIDAVEQIL PPIDAVEQILPTLVRLLHHDDPEVLADTCW R N K V R L 2 1 2 1 0 1 1 0 0 2 2 1 0 0 4 0 1 0 0 2 0 0 20 1 2184.2267 P52292 P52292 239 258 KPNA2 Importin subunit alpha-1 yes yes 2;3 5.3315E-07 144.18 By MS/MS 6 0 2 2 21538000 21538000 0 10623 983 11100 26336;26337 18635;18636;18637 18637 3 167950 0 NKPGVYTK QLQGIVSWGYGCAQKNKPGVYTKVCNYVNW GYGCAQKNKPGVYTKVCNYVNWIQQTIAAN K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 CON__P00761;Q9BYE2;CON__P07477;P07477 CON__P00761 209 216 TMPRSS13;PRSS1 Transmembrane protease serine 13;Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 no no 2 0.047802 132.76 By MS/MS 5 0 1 1 867600 0 867600 + 10624 33;46 11101 26338 18638 18638 1 0 2567200 NKQKPITPETAEK IDLRDDPSTIEKLAKNKQKPITPETAEKLA AKNKQKPITPETAEKLARDLKAVKYVECSA K N K E K L 1 0 1 0 0 1 2 0 0 1 0 3 0 0 2 0 2 0 0 0 0 0 13 2 1482.8042 P60953 P60953 132 144 CDC42 Cell division control protein 42 homolog yes yes 3 0.018056 80.312 By MS/MS 9.5 0.5 1 1 2 371770 371770 0 10625 1078 11102 26339;26340 18639 18639 1 236630 0 NKQTYSTEPNNLK QWMVVRNCSSFLIKRNKQTYSTEPNNLKAR KRNKQTYSTEPNNLKARNSFRYNGLIHRKT R N K L K A 0 0 3 0 0 1 1 0 0 0 1 2 0 0 1 1 2 0 1 0 0 0 13 1 1535.758 P46779 P46779 21 33 RPL28 60S ribosomal protein L28 yes yes 2 0.0034761 137.89 By MS/MS 9 0 1 1 99486 99486 0 10626 886 11103 26341 18640 18640 1 57096 0 NKTEYEEAQDAIVK FTNSKLTSLNEEYTKNKTEYEEAQDAIVKE KNKTEYEEAQDAIVKEIVNISSGYVEPMQT K N K V K E 2 0 1 1 0 1 3 0 0 1 0 2 0 0 0 0 1 0 1 1 0 0 14 1 1636.7944 P43246 P43246 566 579 MSH2 DNA mismatch repair protein Msh2 yes yes 3 0.0018593 98.582 By MS/MS 4 0 1 1 0 0 0 10627 862 11104 26342 18641 18641 1 0 0 NKTGEITASSNK EFGFQNNGFSVYINRNKTGEITASSNKSLN INRNKTGEITASSNKSLNLLKIKHGDLLFL R N K N K S 1 0 2 0 0 0 1 1 0 1 0 2 0 0 0 2 2 0 0 0 0 0 12 1 1248.631 Q8TAT6 Q8TAT6 51 62 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 0.037242 127.83 By MS/MS 4.5 0.5 1 1 2 413910 413910 0 10628 1984 11105 26343;26344 18642 18642 1 14667 0 NKVFQEALR QAVLDLQRCVSLEPKNKVFQEALRNIGGQI VSLEPKNKVFQEALRNIGGQIQEKVRYMSS K N K L R N 1 1 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 1 1103.6087 Q9H3U1 Q9H3U1 125 133 UNC45A Protein unc-45 homolog A yes yes 2 0.051372 111.46 By MS/MS 4 0 1 1 1308800 1308800 0 10629 2493 11106 26345 18643 18643 1 35728 0 NKYEDEINK DSELKNMQDMVEDYRNKYEDEINKRTNAEN MVEDYRNKYEDEINKRTNAENEFVTIKKDV R N K N K R 0 0 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 1 1151.5459 P04264;CON__H-INV:HIT000016045;CON__P04264;CON__P02538;P02538;CON__Q8VED5;CON__P05787;P05787;CON__H-INV:HIT000292931;CON__Q9H552;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647 P04264 268 276 KRT1;KRT6A;KRT8;KRT6C;KRT6B;KRT5 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5 no no 2 0.0091152 138.06 By matching By MS/MS 4.25 0.829 1 1 2 1 3 726240 174100 552140 + 10630 450;45;50;36;53;449;61 11107 26346;26347;26348;26349 18644;18645 18644 2 7156.2 1076800 NKYEDEINKR DSELKNMQDMVEDYRNKYEDEINKRTNAEN VEDYRNKYEDEINKRTNAENEFVTIKKDVD R N K K R T 0 1 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 10 2 1307.647 P04264;CON__H-INV:HIT000016045;CON__P04264;CON__P02538;P02538;CON__Q8VED5;CON__P05787;P05787;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647 P04264 268 277 KRT1;KRT6A;KRT8;KRT6C;KRT6B;KRT5 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5 no no 2;3 0.00063445 147.73 By MS/MS By MS/MS 5.33 2.89 3 2 4 3 3 2 2 3 2 3 11 16 48805000 22286000 26519000 + 10631 450;45;50;36;53;449;61 11108 26350;26351;26352;26353;26354;26355;26356;26357;26358;26359;26360;26361;26362;26363;26364;26365;26366;26367;26368;26369;26370;26371;26372;26373;26374;26375;26376 18646;18647;18648;18649;18650;18651;18652;18653;18654;18655;18656;18657;18658;18659;18660;18661;18662;18663;18664 18653 19 3644100 65343000 NLAADSLLPSLLER DTPRSSGASSIFDLRNLAADSLLPSLLERA RNLAADSLLPSLLERAAPEDVDRRNETLRR R N L E R A 2 1 1 1 0 0 1 0 0 0 5 0 0 0 1 2 0 0 0 0 0 0 14 0 1510.8355 Q96HP0 Q96HP0 196 209 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.010509 93.839 By MS/MS 3 0.816 1 1 1 3 163480 163480 0 10632 2193 11109 26377;26378;26379 18665 18665 1 6028.1 0 NLAEALLTYETLDAK ERAKHILKTHAKEHKNLAEALLTYETLDAK NLAEALLTYETLDAKEIQIVLEGKKLEVR_ K N L A K E 3 0 1 1 0 0 2 0 0 0 4 1 0 0 0 0 2 0 1 0 0 0 15 0 1663.8669 Q96TA2 Q96TA2 745 759 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2;3 1.5461E-39 270.21 By MS/MS 6 0 2 2 4474800 4474800 0 10633 2263 11110 26380;26381 18666;18667 18666 2 34895 0 NLANTVTEEILEK PDPEVMAKVKVLFVRNLANTVTEEILEKAF VRNLANTVTEEILEKAFSQFGKLERVKKLK R N L E K A 1 0 2 0 0 0 3 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 13 0 1472.7722 O60506 O60506 344 356 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 2 3.8814E-74 326.85 By MS/MS 6.5 1.12 1 1 1 1 4 2898100 2898100 0 10634 252 11111 26382;26383;26384;26385 18668;18669;18670;18671 18668 4 95289 0 NLATTVTEEILEK PDPEVMAKVKVLFVRNLATTVTEEILEKSF VRNLATTVTEEILEKSFSEFGKLERVKKLK R N L E K S 1 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 3 0 0 1 0 0 13 0 1459.777 O43390 O43390 347 359 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 2 1.0526E-11 202 By MS/MS 6 1 1 1 2 729860 729860 0 10635 196 11112 26386;26387 18672;18673 18672 2 28052 0 NLDALENAQAIK AHNRAVLAQLGCPIKNLDALENAQAIKKKL PIKNLDALENAQAIKKKLGKLGRQVLPPSE K N L I K K 3 0 2 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 12 0 1298.683 Q86UT6 Q86UT6 648 659 NLRX1 NLR family member X1 yes yes 2 4.3334E-17 229.82 By MS/MS 4.5 0.5 1 1 2 3459100 3459100 0 10636 1825 11113 26388;26389 18674 18674 1 100950 0 NLDDGIDDERLR QDRITRYQGVNLYVKNLDDGIDDERLRKEF YVKNLDDGIDDERLRKEFSPFGTITSAKVM K N L L R K 0 2 1 4 0 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 12 1 1429.6797 P11940;Q9H361 P11940 300 311 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 0.0035772 139.31 By MS/MS 5.5 0.5 1 1 2 3347100 3347100 0 10637 560 11114 26390;26391 18675 18675 1 113200 0 NLDENGLDLLSK TFPKWKPGSLASHVKNLDENGLDLLSKMLI HVKNLDENGLDLLSKMLIYDPAKRISGKMA K N L S K M 0 0 2 2 0 0 1 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 12 0 1329.6776 P06493 P06493 255 266 CDK1 Cyclin-dependent kinase 1 yes yes 2 1.1216E-11 212.09 By MS/MS By matching 8.5 0.866 3 1 3 1 21666000 21622000 43837 10638 477 11115 26392;26393;26394;26395 18676;18677;18678 18676 3 1596400 373990 NLDEQLSAPK ELKPGNLLKDKDRLKNLDEQLSAPKKDVKQ KDRLKNLDEQLSAPKKDVKQPEELPPITTT K N L P K K 1 0 1 1 0 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1113.5666 A5YKK6 A5YKK6 1311 1320 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00087807 128.51 By MS/MS 2 0 1 1 433060 433060 0 10639 19 11116 26396 18679 18679 1 21525 0 NLDIERPTYTNLNR AFMVDNEAIYDICRRNLDIERPTYTNLNRL RNLDIERPTYTNLNRLISQIVSSITASLRF R N L N R L 0 2 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 14 1 1717.8747 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 216 229 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3 0.00066814 171.32 By MS/MS By matching 4.65 2.27 2 2 2 2 1 4 2 2 16 1 1661800000 1661600000 119050 10640 1185;1754;2314;1186 11117 26397;26398;26399;26400;26401;26402;26403;26404;26405;26406;26407;26408;26409;26410;26411;26412;26413 18680;18681;18682;18683;18684;18685;18686;18687;18688;18689 18686 10 15227000 365120 NLDISRPDKK LSGIGVSQVLSTYMKNLDISRPDKKSKKQQ STYMKNLDISRPDKKSKKQQDSTYPIKNEV K N L K K S 0 1 1 2 0 0 0 0 0 1 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1184.6513 P46977 P46977 432 441 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 0.044786 125.71 By MS/MS 2 0.816 1 1 1 3 448160 448160 0 10641 893 11118 26414;26415;26416 18690 18690 1 20327 0 NLDKSIDNK DPSLRKSGVGNIFIKNLDKSIDNKALYDTF GNIFIKNLDKSIDNKALYDTFSAFGNILSC K N L N K A 0 0 2 2 0 0 0 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 1045.5404 P11940;P0CB38;Q13310 P11940 105 113 PABPC1;PABPC4L;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4-like;Polyadenylate-binding protein 4 no no 2 0.0029595 155.58 By MS/MS 4.5 0.5 1 1 2 932550 932550 0 10642 560;1353 11119 26417;26418 18691 18691 1 34853 0 NLDLAVLELMQSSVDNTK FYSLFSETINTELLKNLDLAVLELMQSSVD LAVLELMQSSVDNTKMVSAVLNGMLDQSFR K N L T K M 1 0 2 2 0 1 1 0 0 0 4 1 1 0 0 2 1 0 0 2 0 0 18 0 1989.0089 P78527 P78527 1574 1591 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.6353E-19 210.07 By MS/MS 2 0.816 1 1 1 3 571290 571290 0 10643 1197 11120 26419;26420;26421 18692 18692 970 1 27277 0 NLDLDSIIAEVK SVTDTNVILSMDNSRNLDLDSIIAEVKAQY NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE R N L V K A 1 0 1 2 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1328.7187 CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P48668;P48668;P04259;CON__P13647;P13647 CON__P35908v2 342 353 KRT2;KRT6A;KRT75;KRT6C;KRT6B;KRT5 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5 no no 2 2.4031E-33 266.26 By MS/MS By MS/MS 5 2.88 2 2 1 2 2 2 1 2 1 10 5 23133000 22470000 663260 + 10644 52;50;36;53;449 11121 26422;26423;26424;26425;26426;26427;26428;26429;26430;26431;26432;26433;26434;26435;26436 18693;18694;18695;18696;18697;18698;18699;18700;18701;18702;18703;18704;18705 18700 12 2341100 1203400 NLDPLVYLLSK DFLKKYDELKSKNTRNLDPLVYLLSKLTED KNTRNLDPLVYLLSKLTEDKETLQYLQQNA R N L S K L 0 0 1 1 0 0 0 0 0 0 4 1 0 0 1 1 0 0 1 1 0 0 11 0 1273.7282 Q9BSJ2 Q9BSJ2 77 87 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.012496 96.113 By MS/MS 5 1 1 1 2 503040 503040 0 10645 2338 11122 26437;26438 18706;18707 18707 2 10069 0 NLDQSGTNVAK VVELVNKLRARAQARNLDQSGTNVAKVMKE AQARNLDQSGTNVAKVMKEFVGGNTPNVLT R N L A K V 1 0 2 1 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1145.5677 Q9BQE5 Q9BQE5 183 193 APOL2 Apolipoprotein L2 yes yes 2 1.7906E-07 192.44 By MS/MS 7 0 1 1 2442100 2442100 0 10646 2316 11123 26439 18708 18708 1 43642 0 NLEAMNPPLFLR TYRESIKDLADYASKNLEAMNPPLFLRFLN ASKNLEAMNPPLFLRFLNLLMNDAIFLLDE K N L L R F 1 1 2 0 0 0 1 0 0 0 3 0 1 1 2 0 0 0 0 0 0 0 12 0 1413.7439 Q14139 Q14139 775 786 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.00080856 133.23 By MS/MS 4 0 2 2 516430 516430 0 10647 1408 11124;11125 26440;26441 18709;18710 18709 1081 1 14098 0 NLEAVETLGSTSTICSDK TLTAKRMARKNCLVKNLEAVETLGSTSTIC AVETLGSTSTICSDKTGTLTQNRMTVAHMW K N L D K T 1 0 1 1 1 0 2 1 0 1 2 1 0 0 0 3 3 0 0 1 0 0 18 0 1923.9095 P05023;P50993;Q13733;P13637 P05023 360 377 ATP1A1;ATP1A2;ATP1A4;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 7.862E-116 357.92 By MS/MS 2.5 1.12 1 1 1 1 4 13438000 13438000 0 10648 463;575 11126 26442;26443;26444;26445 18711;18712;18713;18714 18712 4 419900 0 NLEELNISSAQ YLESPLSSETTQLSKNLEELNISSAQ____ QLSKNLEELNISSAQ_______________ K N L A Q - 1 0 2 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1216.5935 Q9Y2R5 Q9Y2R5 120 130 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 2 2.2397E-49 303.71 By MS/MS By matching 10 0 2 1 1 9502400 9420000 82427 10649 2898 11127 26446;26447 18715 18715 1 10012000 2114200 NLEFQGPLEISR EREMALATNRSLAERNLEFQGPLEISRSNL AERNLEFQGPLEISRSNLSDRYQELRKLVE R N L S R S 0 1 1 0 0 1 2 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 12 0 1401.7252 A5D8V6 A5D8V6 53 64 VPS37C Vacuolar protein sorting-associated protein 37C yes yes 2 0.011233 101.56 By MS/MS 7 0 1 1 252290 252290 0 10650 17 11128 26448 18716 18716 0 4508.4 0 NLEGNHDQHGR ASFEAMASIINRLHKNLEGNHDQHGRNSLL RLHKNLEGNHDQHGRNSLLASYIHYVFRLP K N L G R N 0 1 2 1 0 1 1 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1275.5705 Q96N67 Q96N67 831 841 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0035196 136.49 By MS/MS 2 0 1 1 101230 101230 0 10651 2230 11129 26449 18717 18717 1 5031.5 0 NLEIKTDTAK PPSNYEILVKAARSRNLEIKTDTAKSLAES AARSRNLEIKTDTAKSLAESLDQAESPTFP R N L A K S 1 0 1 1 0 0 1 0 0 1 1 2 0 0 0 0 2 0 0 0 0 0 10 1 1131.6136 Q9Y2L1 Q9Y2L1 710 719 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.0012322 183.72 By MS/MS 4 0 1 1 1563200 1563200 0 10652 2892 11130 26450 18718 18718 1 42673 0 NLEISIDTLMAK SVLKDGKPEMNKQIKNLEISIDTLMAKIKS QIKNLEISIDTLMAKIKSTMMTQEQIQKEY K N L A K I 1 0 1 1 0 0 1 0 0 2 2 1 1 0 0 1 1 0 0 0 0 0 12 0 1346.7116 Q9UM54 Q9UM54 873 884 MYO6 Unconventional myosin-VI yes yes 2 0.00026045 144.17 By MS/MS 3 0 1 1 234550 234550 0 10653 2833 11131 26451 18719 18719 1633 1 6122.9 0 NLELLSVAR ENEAVAPEFTNRNPRNLELLSVARKERGWR TNRNPRNLELLSVARKERGWRTVFPSREFW R N L A R K 1 1 1 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 9 0 1013.5869 Q9H0U6 Q9H0U6 55 63 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 8.1529E-07 192.91 By MS/MS 9.5 0.5 1 1 2 2648800 2648800 0 10654 2460 11132 26452;26453 18720;18721 18720 2 1578900 0 NLELLSVARK ENEAVAPEFTNRNPRNLELLSVARKERGWR NRNPRNLELLSVARKERGWRTVFPSREFWH R N L R K E 1 1 1 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 1 1141.6819 Q9H0U6 Q9H0U6 55 64 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 2 0.0021262 143.04 By MS/MS 9 0 1 1 525860 525860 0 10655 2460 11133 26454 18722 18722 1 301800 0 NLELNDDTILNDIK CEFTPAPTPQEHLTKNLELNDDTILNDIKL KNLELNDDTILNDIKLADCEQFQMPDLCAE K N L I K L 0 0 3 3 0 0 1 0 0 2 3 1 0 0 0 0 1 0 0 0 0 0 14 0 1628.8257 Q6P3X3 Q6P3X3 314 327 TTC27 Tetratricopeptide repeat protein 27 yes yes 2 9.9287E-26 241.84 By MS/MS 3.5 1.12 1 1 1 1 4 633220 633220 0 10656 1708 11134 26455;26456;26457;26458 18723;18724 18723 2 21714 0 NLEPEWAAAASEVK VWMVEFYAPWCGHCKNLEPEWAAAASEVKE KNLEPEWAAAASEVKEQTKGKVKLAAVDAT K N L V K E 4 0 1 0 0 0 3 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 14 0 1513.7413 Q15084 Q15084 195 208 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.0026217 113.95 By MS/MS 6 0 1 1 3528900 3528900 0 10657 1478 11135 26459 18725 18725 0 27518 0 NLEPEWAAAASEVKEQTK VWMVEFYAPWCGHCKNLEPEWAAAASEVKE PEWAAAASEVKEQTKGKVKLAAVDATVNQV K N L T K G 4 0 1 0 0 1 4 0 0 0 1 2 0 0 1 1 1 1 0 1 0 0 18 1 1999.9851 Q15084 Q15084 195 212 PDIA6 Protein disulfide-isomerase A6 yes yes 3 0.053167 53.168 By MS/MS 6.5 0.5 1 1 2 6445800 6445800 0 10658 1478 11136 26460;26461 18726 18726 1 52850 0 NLEQYNKLDQDLNEVK AIHKDLEDTEANKEKNLEQYNKLDQDLNEV LEQYNKLDQDLNEVKARVEELDRKYYEVKN K N L V K A 0 0 3 2 0 2 2 0 0 0 3 2 0 0 0 0 0 0 1 1 0 0 16 1 1961.9694 Q9UQE7 Q9UQE7 430 445 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2;3 3.0554E-11 223.06 By MS/MS 3 0 2 2 2353500 2353500 0 10659 2860 11137 26462;26463 18727;18728;18729 18729 3 61437 0 NLESALR RKITRTSFLDDAFRKNLESALRFGNPLLVQ FLDDAFRKNLESALRFGNPLLVQDVESYDP K N L L R F 1 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 801.43447 Q14204 Q14204 3622 3628 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.013127 145.34 By MS/MS 1 0 1 1 917820 917820 0 10660 1421 11138 26464 18730 18730 1 44843 0 NLETFCEETR YGEENWKKQTSQCLKNLETFCEETRRNFEA SQCLKNLETFCEETRRNFEATLGWLQEHAC K N L T R R 0 1 1 0 1 0 3 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 10 0 1297.5609 Q9P2J5 Q9P2J5 549 558 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0003193 152.04 By MS/MS 3.5 0.5 1 1 2 1132400 1132400 0 10661 2738 11139 26465;26466 18731 18731 1 29768 0 NLETLQQELGIEGENR QYVWFNIGSVDTFERNLETLQQELGIEGEN LETLQQELGIEGENRVPVVYIAESDGSFLL R N L N R V 0 1 2 0 0 2 4 2 0 1 3 0 0 0 0 0 1 0 0 0 0 0 16 0 1841.9119 Q9Y4W6 Q9Y4W6 225 240 AFG3L2 AFG3-like protein 2 yes yes 2 1.508E-127 369.03 By MS/MS 5 0 1 1 841990 841990 0 10662 2960 11140 26467 18732;18733 18732 2 34609 0 NLFEDQNTLTSICEK AIQFLASVCERPHYKNLFEDQNTLTSICEK NLFEDQNTLTSICEKVIVPNMEFRAADEEA K N L E K V 0 0 2 1 1 1 2 0 0 1 2 1 0 1 0 1 2 0 0 0 0 0 15 0 1810.8407 P55060 P55060 332 346 CSE1L Exportin-2 yes yes 2 5.2977E-77 314.29 By MS/MS 4.5 0.5 1 1 2 19748000 19748000 0 10663 1025 11141 26468;26469 18734;18735 18735 2 555180 0 NLFELAR DLMSKWLGESEKLVKNLFELARQHKPSIIF GESEKLVKNLFELARQHKPSIIFIDEVDSL K N L A R Q 1 1 1 0 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 7 0 861.47085 Q9UN37 Q9UN37 211 217 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 2 0.010557 152.47 By MS/MS 6 0.816 1 1 1 3 1961500 1961500 0 10664 2836 11142 26470;26471;26472 18736;18737;18738 18737 3 26214 0 NLFNVVDCK VTLMQLPTRQEIRVRNLFNVVDCKLHWQKN QEIRVRNLFNVVDCKLHWQKNGDYLCVKVD R N L C K L 0 0 2 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 9 0 1107.5383 P55884 P55884 508 516 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0013728 168.26 By MS/MS By MS/MS 2.8 1.17 1 1 1 2 4 1 12886000 12789000 97651 10665 1040 11143 26473;26474;26475;26476;26477 18739;18740;18741;18742 18742 4 350840 204050 NLGESEIR DELKRLDEELEDAEKNLGESEIRDAMMAKA ELEDAEKNLGESEIRDAMMAKAEYLCRIGD K N L I R D 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 916.46141 Q15008 Q15008 94 101 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.044688 93.429 By MS/MS 7 0 1 1 557480 557480 0 10666 1460 11144 26478 18743 18743 1 9962.3 0 NLGFGMGIEFR VVKKQKPELLNKITKNLGFGMGIEFREGSL KITKNLGFGMGIEFREGSLVINSKNQYKLK K N L F R E 0 1 1 0 0 0 1 3 0 1 1 0 1 2 0 0 0 0 0 0 0 0 11 0 1239.607 Q9Y5B9 Q9Y5B9 347 357 SUPT16H FACT complex subunit SPT16 yes yes 2 0.0010769 125.97 By MS/MS 2 0.816 1 1 1 3 334210 334210 0 10667 2968 11145 26479;26480;26481 18744;18745 18745 1712 2 12142 0 NLGIPIITVLGDSK QLAVAMGPNIKQHVKNLGIPIITVLGDSKN KNLGIPIITVLGDSKNNVRAAALATVNAWA K N L S K N 0 0 1 1 0 0 0 2 0 3 2 1 0 0 1 1 1 0 0 1 0 0 14 0 1438.8395 Q14008 Q14008 941 954 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.017203 83.397 By MS/MS 2.5 0.5 1 1 2 674070 674070 0 10668 1405 11146 26482;26483 18746 18746 1 28871 0 NLGLEELGIELDPR CDVLLVCIGRRPFTKNLGLEELGIELDPRG KNLGLEELGIELDPRGRIPVNTRFQTKIPN K N L P R G 0 1 1 1 0 0 3 2 0 1 4 0 0 0 1 0 0 0 0 0 0 0 14 0 1566.8253 P09622 P09622 321 334 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 2 1.0401E-25 241.35 By MS/MS 6 0 1 1 9262500 9262500 0 10669 518 11147 26484 18747 18747 1 72229 0 NLGLYVK HIKVDSGYRVHEELRNLGLYVKTRDGSDYE YRVHEELRNLGLYVKTRDGSDYEGWCWPGS R N L V K T 0 0 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 1 1 0 0 7 0 805.46979 Q14697 Q14697 485 491 GANAB Neutral alpha-glucosidase AB yes yes 2 0.050496 101.21 By MS/MS 5 0.816 1 1 1 3 3858200 3858200 0 10670 1443 11148 26485;26486;26487 18748 18748 1 104380 0 NLGSINTELQDVQR IQKTKKLYIDSCARRNLGSINTELQDVQRI RNLGSINTELQDVQRIMVANIEEVLQRGEA R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 O75396 O75396 134 147 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 8.6178E-186 424.4 By MS/MS By matching 8.8 0.748 2 2 1 4 1 23560000 23450000 109530 10671 304 11149 26488;26489;26490;26491;26492 18749;18750;18751;18752 18750 4 11515000 934410 NLGTALAELR IQDQASAMQLSQCAKNLGTALAELRTAAQK SQCAKNLGTALAELRTAAQKAQEACGPLEM K N L L R T 2 1 1 0 0 0 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1056.5928 Q9Y490 Q9Y490 1026 1035 TLN1 Talin-1 yes yes 2 1.6547E-10 201.61 By MS/MS 2.5 0.5 1 1 2 1596800 1596800 0 10672 2947 11150 26493;26494 18753;18754 18754 2 47936 0 NLGVVVAPHTLK KWELNPEIVARHFFKNLGVVVAPHTLKLPE FFKNLGVVVAPHTLKLPEEPITRWGEYWCE K N L L K L 1 0 1 0 0 0 0 1 1 0 2 1 0 0 1 0 1 0 0 3 0 0 12 0 1246.7398 Q9BYD2 Q9BYD2 196 207 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.0031014 115.57 By MS/MS 8 0 1 1 2268300 2268300 0 10673 2413 11151 26495 18755 18755 1 149640 0 NLHPQSWTQSNIK WDAFGLPAENAAVERNLHPQSWTQSNIKHM ERNLHPQSWTQSNIKHMRKQLDRLGLCFSW R N L I K H 0 0 2 0 0 2 0 0 1 1 1 1 0 0 1 2 1 1 0 0 0 0 13 0 1551.7794 Q15031 Q15031 143 155 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.001378 126.71 By MS/MS 4 0 1 1 1198000 1198000 0 10674 1467 11152 26496 18756 18756 1 32703 0 NLHVVFTMNPSSEGLK SHEELYKWFTSQVIRNLHVVFTMNPSSEGL LHVVFTMNPSSEGLKDRAATSPALFNRCVL R N L L K D 0 0 2 0 0 0 1 1 1 0 2 1 1 1 1 2 1 0 0 2 0 0 16 0 1771.8927 Q14204 Q14204 3061 3076 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0094867 83.292 By MS/MS 1 0 1 1 354540 354540 0 10675 1421 11153 26497 18757 18757 1111 1 17322 0 NLIAFSEDGSDPYVR SSQRNKLIVVVHACRNLIAFSEDGSDPYVR NLIAFSEDGSDPYVRMYLLPDKRRSGRRKT R N L V R M 1 1 1 2 0 0 1 1 0 1 1 0 0 1 1 2 0 0 1 1 0 0 15 0 1681.7948 A0FGR8 A0FGR8 812 826 ESYT2 Extended synaptotagmin-2 yes yes 2 1.4763E-07 171.99 By MS/MS 4.5 0.5 1 1 2 1966800 1966800 0 10676 6 11154 26498;26499 18758 18758 1 56847 0 NLICAFLTDR SLCFPEDAEISKHAKNLICAFLTDREVRLG SKHAKNLICAFLTDREVRLGRNGVEEIRQH K N L D R E 1 1 1 1 1 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 10 0 1221.6176 O75116;Q13464 O75116 327 336 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 2 0.0060416 104.05 By MS/MS 3 0 1 1 166210 166210 0 10677 278;1373 11155 26500 18759 18759 1 4338.8 0 NLIDAGVDALR LQVIGGNVVTAAQAKNLIDAGVDALRVGMG AQAKNLIDAGVDALRVGMGSGSICITQEVL K N L L R V 2 1 1 2 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1155.6248 P12268 P12268 312 322 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 3.1143E-11 219.5 By MS/MS 7.5 1.12 1 1 1 1 4 30829000 30829000 0 10678 564 11156 26501;26502;26503;26504 18760;18761;18762;18763 18760 4 374530 0 NLIDEDGNNQWPEGLK SMRKKVCDIAAELARNLIDEDGNNQWPEGL LIDEDGNNQWPEGLKFLFDSVSSQNVGLRE R N L L K F 0 0 3 2 0 1 2 2 0 1 2 1 0 0 1 0 0 1 0 0 0 0 16 0 1840.8592 O00410 O00410 119 134 IPO5 Importin-5 yes yes 2 1.1865E-28 233.52 By MS/MS 4 0 1 1 1515800 1515800 0 10679 91 11157 26505 18764;18765 18764 2 41379 0 NLIIEAVTNLR GQDKPHETYRLLKRRNLIIEAVTNLRLIES LKRRNLIIEAVTNLRLIESLFTIQKMIMDQ R N L L R L 1 1 2 0 0 0 1 0 0 2 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1254.7296 Q12789 Q12789 619 629 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0010811 146.11 By MS/MS 2.5 0.5 1 1 2 112010 112010 0 10680 1306 11158 26506;26507 18766 18766 1 4958.2 0 NLINQTTAK LQAVRTCYNIYLASKNLINQTTAKATLTQM IYLASKNLINQTTAKATLTQMLNVIFARME K N L A K A 1 0 2 0 0 1 0 0 0 1 1 1 0 0 0 0 2 0 0 0 0 0 9 0 1001.5506 Q9Y6D6;Q9Y6D5 Q9Y6D6 187 195 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.015751 99.136 By MS/MS 2.5 0.5 1 1 2 597140 597140 0 10681 3003;3002 11159 26508;26509 18767 18767 1 27716 0 NLKLGIHEDSTNR EDKENYKKFYEAFSKNLKLGIHEDSTNRRR SKNLKLGIHEDSTNRRRLSELLRYHTSQSG K N L N R R 0 1 2 1 0 0 1 1 1 1 2 1 0 0 0 1 1 0 0 0 0 0 13 1 1495.7743 P08238 P08238 436 448 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0012348 115.92 By MS/MS 4.5 0.5 1 1 2 2347000 2347000 0 10682 501 11160 26510;26511 18768;18769 18768 2 76693 0 NLKNEITK NRFAVLDRMHSLLIKNLKNEITKKVQVPNC MHSLLIKNLKNEITKKVQVPNCDEIFYAGT K N L T K K 0 0 2 0 0 0 1 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 8 1 958.54475 P53621 P53621 439 446 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.052147 129.42 By MS/MS 2 0.816 1 1 1 3 1201400 1201400 0 10683 1005 11161 26512;26513;26514 18770 18770 1 46994 0 NLKNEITKK NRFAVLDRMHSLLIKNLKNEITKKVQVPNC HSLLIKNLKNEITKKVQVPNCDEIFYAGTG K N L K K V 0 0 2 0 0 0 1 0 0 1 1 3 0 0 0 0 1 0 0 0 0 0 9 2 1086.6397 P53621 P53621 439 447 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.0045712 105.52 By MS/MS 3 0 1 1 0 0 0 10684 1005 11162 26515 18771 18771 1 0 0 NLLDVIDQAR KQMLTAAHALAVDAKNLLDVIDQARLKMLG AVDAKNLLDVIDQARLKMLGQTRPH_____ K N L A R L 1 1 1 2 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1155.6248 Q05397 Q05397 1033 1042 PTK2 Focal adhesion kinase 1 yes yes 2 9.4235E-05 180.09 By MS/MS 4 0 1 1 280480 280480 0 10685 1270 11163 26516 18772 18772 1 7656.7 0 NLLGLALGR PDTLEMRVRDGSKIRNLLGLALGRLEGGSA DGSKIRNLLGLALGRLEGGSARHVVFSGSG R N L G R L 1 1 1 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 925.5709 Q8N5L8 Q8N5L8 38 46 RPP25L Ribonuclease P protein subunit p25-like protein yes yes 2 0.00089973 144.38 By MS/MS 10 0 1 1 214480 214480 0 10686 1922 11164 26517 18773 18773 1 227970 0 NLLGLYPR WWWARLNDKEGYVPRNLLGLYPRIKPRQRS KEGYVPRNLLGLYPRIKPRQRSLA______ R N L P R I 0 1 1 0 0 0 0 1 0 0 3 0 0 0 1 0 0 0 1 0 0 0 8 0 944.54435 Q13625;Q96KQ4 Q13625 1112 1119 TP53BP2;PPP1R13B Apoptosis-stimulating of p53 protein 2;Apoptosis-stimulating of p53 protein 1 yes no 2 0.0038801 155.51 By MS/MS 3 0 1 1 0 0 0 10687 1391 11165 26518 18774 18774 1 0 0 NLLHVTDTGVGMTREELVK GNEELTVKIKCDKEKNLLHVTDTGVGMTRE VTDTGVGMTREELVKNLGTIAKSGTSEFLN K N L V K N 0 1 1 1 0 0 2 2 1 0 3 1 1 0 0 0 3 0 0 3 0 0 19 1 2111.1045 P14625 P14625 143 161 HSP90B1 Endoplasmin yes yes 3;4 0.0049734 77.027 By MS/MS 4 0 2 2 5009500 5009500 0 10688 589 11166 26519;26520 18775;18776 18775 380 2 136750 0 NLLKEEK EEGTDVVIKMLQTAKNLLKEEKLVHSYPYD IKMLQTAKNLLKEEKLVHSYPYDWRTKKPV K N L E K L 0 0 1 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 7 1 872.49673 Q9NSE4 Q9NSE4 452 458 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0020673 207.6 By MS/MS 4.5 0.5 1 1 2 6022900 6022900 0 10689 2624 11167 26521;26522 18777 18777 1 171180 0 NLLLLANSTEEQQK IIAPCKVYYDISTAKNLLLLANSTEEQQKW KNLLLLANSTEEQQKWVSRLVKKIPKKPPA K N L Q K W 1 0 2 0 0 2 2 0 0 0 4 1 0 0 0 1 1 0 0 0 0 0 14 0 1599.8468 O75116 O75116 1326 1339 ROCK2 Rho-associated protein kinase 2 yes yes 2 5.4761E-35 255.41 By MS/MS 3 0 1 1 388700 388700 0 10690 278 11168 26523 18778 18778 1 10147 0 NLLLSGAQLEASR FLGRARHFFTVTDPRNLLLSGAQLEASRNI PRNLLLSGAQLEASRNIVQNYRAGVVTPGI R N L S R N 2 1 1 0 0 1 1 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 13 0 1370.7518 Q9BWM7 Q9BWM7 35 47 SFXN3 Sideroflexin-3 yes yes 2 5.3941E-35 264.3 By MS/MS 8 0 1 1 1494000 1494000 0 10691 2397 11169 26524 18779 18779 1 98559 0 NLLNSVIGR SRASRDLLKEFPQPKNLLNSVIGRALGISH EFPQPKNLLNSVIGRALGISHAKDKLVYVH K N L G R A 0 1 2 0 0 0 0 1 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 984.57163 Q7L2E3 Q7L2E3 55 63 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00018676 160.59 By MS/MS 5 1.58 1 1 1 1 4 6478900 6478900 0 10692 1763 11170 26525;26526;26527;26528 18780;18781;18782 18780 3 158790 0 NLLQELK NAAEESLPEIQKEHRNLLQELKVIQENEHA PEIQKEHRNLLQELKVIQENEHALQKDALS R N L L K V 0 0 1 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 856.50182 Q9NTJ3 Q9NTJ3 992 998 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.032233 113.41 By MS/MS 3 0 1 1 2052600 2052600 0 10693 2630 11171 26529 18783 18783 1 53584 0 NLLQLSPETK QFMAQFHEKIYQMLKNLLQLSPETKHCILS YQMLKNLLQLSPETKHCILSWLGNCLHANA K N L T K H 0 0 1 0 0 1 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 10 0 1141.6343 Q14139 Q14139 387 396 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.00084587 138.08 By MS/MS 3.5 0.5 1 1 2 350480 350480 0 10694 1408 11172 26530;26531 18784;18785 18784 2 9149.3 0 NLLQVDLTK RFPSHFSSDLKDLLRNLLQVDLTKRFGNLK LKDLLRNLLQVDLTKRFGNLKNGVNDIKNH R N L T K R 0 0 1 1 0 1 0 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 9 0 1042.6023 P17612;P22694 P17612 272 280 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta yes no 2 0.00094326 138.08 By MS/MS 7 0 1 1 2672300 2672300 0 10695 614 11173 26532 18786 18786 1 47755 0 NLLSVAYK KSVTEQGAELSNEERNLLSVAYKNVVGARR ELSNEERNLLSVAYKNVVGARRSSWRVVSS R N L Y K N 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 8 0 906.51747 P27348;P62258;P31946;P31947;P61981;P63104;Q04917 P63104 42 49 YWHAQ;YWHAE;YWHAB;SFN;YWHAG;YWHAZ;YWHAH 14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein eta no no 2 0.0025878 153.04 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 24450000 24340000 109870 10696 1121;1169;703;760;1111;1268;761 11174 26533;26534;26535;26536 18787;18788 18788 2 1843200 937280 NLLTAAADAIER EELVSERTEAFTIARNLLTAAADAIERIMS IARNLLTAAADAIERIMSSYKEVTELAGYT R N L E R I 4 1 1 1 0 0 1 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1256.6725 P33897 P33897 390 401 ABCD1 ATP-binding cassette sub-family D member 1 yes yes 2 0.00067333 140.63 By MS/MS 5 0 1 1 0 0 0 10697 770 11175 26537 18789 18789 1 0 0 NLLTGETEADPEMIK RMINKYKRRRFQKTKNLLTGETEADPEMIK NLLTGETEADPEMIKRAEDYGPVEVISHWH K N L I K R 1 0 1 1 0 0 3 1 0 1 2 1 1 0 1 0 2 0 0 0 0 0 15 0 1659.8026 O96005 O96005 210 224 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 2 1.8809E-05 139.19 By MS/MS 1.5 0.5 1 1 2 251890 251890 0 10698 418 11176 26538;26539 18790 18790 1 12355 0 NLLTGLVR RRMGLGPESRIHLLRNLLTGLVRHERIEAP SRIHLLRNLLTGLVRHERIEAPWARVDEMR R N L V R H 0 1 1 0 0 0 0 1 0 0 3 0 0 0 0 0 1 0 0 1 0 0 8 0 884.54435 Q9NRX2 Q9NRX2 31 38 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2 0.0043246 140.09 By MS/MS 9 0 1 1 1330800 1330800 0 10699 2614 11177 26540 18791 18791 1 763750 0 NLLTPLMEK VNSEYPAERKQALMRNLLTPLMEKFKILLE KQALMRNLLTPLMEKFKILLEKLMLAQDEE R N L E K F 0 0 1 0 0 0 1 0 0 0 3 1 1 0 1 0 1 0 0 0 0 0 9 0 1057.5842 O43592 O43592 619 627 XPOT Exportin-T yes yes 2 0.011002 102.62 By MS/MS 4 0 1 1 351890 351890 0 10700 208 11178 26541 18792 18792 1 9606.1 0 NLLTVTSSDEMMK RVVQMLGSLGGQINKNLLTVTSSDEMMKSY NKNLLTVTSSDEMMKSYVAWDREKRLSFAV K N L M K S 0 0 1 1 0 0 1 0 0 0 2 1 2 0 0 2 2 0 0 1 0 0 13 0 1467.6949 P78527 P78527 869 881 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.3598E-26 250.51 By MS/MS 1.4 0.49 3 2 5 2117300 2117300 0 10701 1197 11179;11180;11181 26542;26543;26544;26545;26546 18793;18794;18795;18796;18797 18795 971;972 5 104080 0 NLMQFHTVGTK LAKVIQIATSSSTAKNLMQFHTVGTKTKLS STAKNLMQFHTVGTKTKLSTLTLLWPCPMT K N L T K T 0 0 1 0 0 1 0 1 1 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 1274.6441 Q7L2E3 Q7L2E3 264 274 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0013498 120.63 By MS/MS 3.5 0.5 1 1 2 706520 706520 0 10702 1763 11182 26547;26548 18798 18798 1248 1 18608 0 NLMTSEIHNTVK HFANKKCQDVIVAARNLMTSEIHNTVKIIP AARNLMTSEIHNTVKIIPDSKINVPELPTP R N L V K I 0 0 2 0 0 0 1 0 1 1 1 1 1 0 0 1 2 0 0 1 0 0 12 0 1385.6973 O43264 O43264 413 424 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 6.076E-07 177.57 By MS/MS 4 0 1 1 811070 811070 0 10703 189 11183 26549 18799 18799 1 22141 0 NLNPNDSIVVNSCQMK LLMRGYYSPGIVSTRNLNPNDSIVVNSCQM LNPNDSIVVNSCQMKFQLRCTPVPARLRPA R N L M K F 0 0 4 1 1 1 0 0 0 1 1 1 1 0 1 2 0 0 0 2 0 0 16 0 1831.8557 Q12789 Q12789 1661 1676 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 2.9685E-06 149.82 By MS/MS 2 0 1 1 182410 182410 0 10704 1306 11184 26550 18800 18800 1042 1 9066.7 0 NLPEGVAMEVTK LTGSTADVYLEYIQRNLPEGVAMEVTKTQL IQRNLPEGVAMEVTKTQLEQLPEHIKEPIW R N L T K T 1 0 1 0 0 0 2 1 0 0 1 1 1 0 1 0 1 0 0 2 0 0 12 0 1286.654 P82664 P82664 163 174 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 2 0.0031512 115.33 By MS/MS 9.5 0.5 1 1 2 1356600 1356600 0 10705 1203 11185 26551;26552 18801 18801 1 1085600 0 NLPLELDFLNEGR FPEFEFMWLVDEAKKNLPLELDFLNEGRNA KKNLPLELDFLNEGRNAEKVSQMLRHFDFL K N L G R N 0 1 2 1 0 0 2 1 0 0 4 0 0 1 1 0 0 0 0 0 0 0 13 0 1528.7886 Q86TW2 Q86TW2 226 238 ADCK1 Uncharacterized aarF domain-containing protein kinase 1 yes yes 2 8.423E-12 204.48 By MS/MS 6 0 1 1 1711500 1711500 0 10706 1816 11186 26553 18802;18803 18802 2 13346 0 NLQDAMQVCR LLRGASKEILSEVERNLQDAMQVCRNVLLD SEVERNLQDAMQVCRNVLLDPQLVPGGGAS R N L C R N 1 1 1 1 1 2 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 10 0 1233.5594 P49368 P49368 390 399 CCT3 T-complex protein 1 subunit gamma yes yes 2 3.4373E-17 232.83 By MS/MS By matching 7 1.73 2 2 1 1 1 1 7 1 40871000 40825000 46630 10707 916 11187;11188 26554;26555;26556;26557;26558;26559;26560;26561 18804;18805;18806;18807;18808 18808 668 5 762190 143010 NLQDVVER DALDPNAYEAFKASRNLQDVVERVLHNAQE EAFKASRNLQDVVERVLHNAQEVEKEPGQR R N L E R V 0 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 971.50361 P49916 P49916 446 453 LIG3 DNA ligase 3 yes yes 2 0.012815 116.05 By MS/MS 4 0 1 1 538930 538930 0 10708 941 11189 26562 18809 18809 1 14712 0 NLQEGNLER IQMLTLLRAFEARDRNLQEGNLERVNFWSA FEARDRNLQEGNLERVNFWSAVNVAVLLLV R N L E R V 0 1 2 0 0 1 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1071.5309 Q13445 Q13445 184 192 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 2 0.0021123 128.6 By MS/MS 8 0 1 1 513170 513170 0 10709 1371 11190 26563 18810 18810 1 33853 0 NLQEGQVTDPR KDDTTTKRWLAQLVKNLQEGQVTDPRGIPL QLVKNLQEGQVTDPRGIPLPPQ________ K N L P R G 0 1 1 1 0 2 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1255.6157 Q92600 Q92600 282 292 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 0.00061798 138.76 By MS/MS 8 0 1 1 1977100 1977100 0 10710 2064 11191 26564 18811 18811 1 130430 0 NLQEILR N L L R 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 884.50797 REV__P31948 yes yes 2 0.012342 147.52 By MS/MS 4.5 0.5 2 2 4 1482000 1482000 0 + 10711 3022 11192 26565;26566;26567;26568 18812;18813 18812 2 52201 0 NLQEIQQAGER AAETEGISELPHVERNLQEIQQAGERLRSR HVERNLQEIQQAGERLRSRTLTRTSQETAD R N L E R L 1 1 1 0 0 3 2 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1284.6422 Q8N1F7 Q8N1F7 32 42 NUP93 Nuclear pore complex protein Nup93 yes yes 2 8.2995E-07 180.97 By MS/MS 5.38 2.5 1 1 1 1 1 1 1 1 8 56665000 56665000 0 10712 1898 11193 26569;26570;26571;26572;26573;26574;26575;26576 18814;18815 18815 2 2310700 0 NLQLLMDR KHELLSLASSNHLGKNLQLLMDRVDEMSQD SSNHLGKNLQLLMDRVDEMSQDIVKYNTYM K N L D R V 0 1 1 1 0 1 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 8 0 1001.5328 O15372 O15372 242 249 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.0051892 127.46 By MS/MS 7 0 1 1 923750 923750 0 10713 173 11194 26577 18816 18816 106 1 16508 0 NLQSVVLSK KTQGVIKYMGPAGAKNLQSVVLSKMNFESF GPAGAKNLQSVVLSKMNFESFVKDLLLVRQ K N L S K M 0 0 1 0 0 1 0 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 9 0 986.57605 P43246 P43246 74 82 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0010895 140.11 By MS/MS 4 0 1 1 2529500 2529500 0 10714 862 11195 26578 18817 18817 1 69053 0 NLQYYDISAK DRKVKAKSIVFHRKKNLQYYDISAKSNYNF FHRKKNLQYYDISAKSNYNFEKPFLWLARK K N L A K S 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 2 0 0 0 10 0 1213.5979 P62826 P62826 143 152 RAN GTP-binding nuclear protein Ran yes yes 2 0.00084921 129.85 By MS/MS 9 0.816 1 1 1 3 8744600 8744600 0 10715 1146 11196 26579;26580;26581 18818 18818 1 4669900 0 NLRDIDEVSSLLR KAHEILPNLVCCSAKNLRDIDEVSSLLRTS AKNLRDIDEVSSLLRTSIMSKQYGNEVFLA K N L L R T 0 2 1 2 0 0 1 0 0 1 3 0 0 0 0 2 0 0 0 1 0 0 13 1 1528.8209 P50990 P50990 153 165 CCT8 T-complex protein 1 subunit theta yes yes 2;3 5.8236E-17 225.55 By MS/MS 6.77 1.97 1 1 1 3 2 2 2 1 13 114600000 114600000 0 10716 955 11197 26582;26583;26584;26585;26586;26587;26588;26589;26590;26591;26592;26593;26594 18819;18820;18821;18822 18820 4 1057500 0 NLSAQCQEVR HTDRQDIQKSMAAFKNLSAQCQEVRKRKEL MAAFKNLSAQCQEVRKRKELELQILTEAIR K N L V R K 1 1 1 0 1 2 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1203.5666 Q14155 Q14155 443 452 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 2 0.0031667 113.44 By MS/MS 4.5 0.5 1 1 2 953330 953330 0 10717 1410 11198 26595;26596 18823 18823 1 37369 0 NLSDSEKELYIQHAK DSPQEKLKTVKENWKNLSDSEKELYIQHAK NLSDSEKELYIQHAKEDETRYHNEMKSWEE K N L A K E 1 0 1 1 0 1 2 0 1 1 2 2 0 0 0 2 0 0 1 0 0 0 15 1 1773.8897 Q00059 Q00059 191 205 TFAM Transcription factor A, mitochondrial yes yes 2;3;4 0.00018343 134.99 By MS/MS 9 0 3 3 9131200 9131200 0 10718 1229 11199 26597;26598;26599 18824;18825;18826 18824 3 5240500 0 NLSEEGLLR VSTKCCKKSIVRLVRNLSEEGLLRLYRTTV IVRLVRNLSEEGLLRLYRTTVIQDGIKKKV R N L L R L 0 1 1 0 0 0 2 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 9 0 1029.5455 Q12789 Q12789 665 673 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.024656 98.458 By MS/MS 1 0 1 1 0 0 0 10719 1306 11200 26600 18827 18827 1 0 0 NLSEFFR VNMKEAAVEDLHHYRNLSEFFRRKLKPQAR VEDLHHYRNLSEFFRRKLKPQARPVCGLHS R N L F R R 0 1 1 0 0 0 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 7 0 911.45012 Q9UG56 Q9UG56 164 170 PISD Phosphatidylserine decarboxylase proenzyme;Phosphatidylserine decarboxylase alpha chain;Phosphatidylserine decarboxylase beta chain yes yes 2 0.012153 148.04 By MS/MS 7.5 0.5 1 1 2 2418800 2418800 0 10720 2770 11201 26601;26602 18828 18828 1 152600 0 NLSGQPNFPCR FVILPLNLVGTILGRNLSGQPNFPCRVNAV ILGRNLSGQPNFPCRVNAVPRPIPEKKWFM R N L C R V 0 1 2 0 1 1 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 11 0 1288.5983 Q9HD45 Q9HD45 419 429 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 5.5508E-07 185.81 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 4020000 4020000 0 10721 2568 11202 26603;26604;26605;26606;26607;26608 18829;18830;18831;18832 18829 4 138140 0 NLSPGAVESDVR DQTVRVWDISGLRKKNLSPGAVESDVRGIT RKKNLSPGAVESDVRGITGVDLFGTTDAVV K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0024049 119.03 By MS/MS 2 0.816 1 1 1 3 6684000 6684000 0 10722 1005 11203 26609;26610;26611 18833;18834;18835 18834 3 236830 0 NLSREELVDALR SGPLGDQPFAGLLPKNLSREELVDALRAAV LPKNLSREELVDALRAAVVDRKGPLVTLNK K N L L R A 1 2 1 1 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 12 1 1413.7576 Q6P087 Q6P087 69 80 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 3 0.0051868 94.122 By MS/MS 8 0 1 1 885440 885440 0 10723 1697 11204 26612 18836 18836 1 58412 0 NLSSNEAISLEEIR KGFNKVVLKHLKKTKNLSSNEAISLEEIRI KNLSSNEAISLEEIRIRVVQMLGSLGGQIN K N L I R I 1 1 2 0 0 0 3 0 0 2 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1573.7948 P78527 P78527 839 852 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.2594E-26 246.63 By MS/MS 2.5 1.12 1 1 1 1 4 4118400 4118400 0 10724 1197 11205 26613;26614;26615;26616 18837;18838;18839;18840;18841 18838 5 162250 0 NLSSQLQTGR VKEELHQLQCEWKTRNLSSQLQTGRDLEDE EWKTRNLSSQLQTGRDLEDEVVVSYSHPHV R N L G R D 0 1 1 0 0 2 0 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 10 0 1102.5731 Q9NU22 Q9NU22 3269 3278 MDN1 Midasin yes yes 2 3.2849E-05 173.24 By MS/MS 1 0 1 1 867390 867390 0 10725 2635 11206 26617 18842 18842 1 42379 0 NLSTFAVDGK NHDAAIFPGGFGAAKNLSTFAVDGKDCKVN FGAAKNLSTFAVDGKDCKVNKEVERVLKEF K N L G K D 1 0 1 1 0 0 0 1 0 0 1 1 0 1 0 1 1 0 0 1 0 0 10 0 1050.5346 P0DPI2;A0A0B4J2D5 P0DPI2 142 151 yes no 2 2.224E-10 197.21 By MS/MS 9 0.816 1 1 1 3 1454600 1454600 0 10726 4 11207 26618;26619;26620 18843 18843 1 517170 0 NLSVSCAAASVASSR KALCPTRENFNSQQKNLSVSCAAASVASSR NLSVSCAAASVASSRSSVLKDSEYGCLKIP K N L S R S 4 1 1 0 1 0 0 0 0 0 1 0 0 0 0 5 0 0 0 2 0 0 15 0 1478.7147 Q9UPY3 Q9UPY3 1616 1630 DICER1 Endoribonuclease Dicer yes yes 2 1.2361E-05 145.83 By MS/MS 2.5 0.5 1 1 2 489720 489720 0 10727 2856 11208 26621;26622 18844 18844 1 18808 0 NLTEDNSQNQDLIAK DSNPFLTQWVIYAIRNLTEDNSQNQDLIAK NLTEDNSQNQDLIAKMEEQGLADASLLKKV R N L A K M 1 0 3 2 0 2 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 15 0 1701.817 Q9UBB4 Q9UBB4 424 438 ATXN10 Ataxin-10 yes yes 2 2.0912E-38 306.44 By MS/MS By matching 6.33 0.471 2 1 2 1 13573000 13555000 18034 10728 2744 11209 26623;26624;26625 18845 18845 1 225750 55308 NLTLDQMIR CLPLDKYLQWEIGNKNLTLDQMIRILLCLK WEIGNKNLTLDQMIRILLCLKNNGNWQEAL K N L I R I 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1102.5805 Q7L0Y3 Q7L0Y3 350 358 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 7.1629E-06 176.44 By MS/MS 7 0 1 1 2400800 2400800 0 10729 1761 11210 26626 18846 18846 1242 1 42903 0 NLTNPNTVIILIGNK RSTYNHLSSWLTDARNLTNPNTVIILIGNK NLTNPNTVIILIGNKADLEAQRDVTYEEAK R N L N K A 0 0 4 0 0 0 0 1 0 3 2 1 0 0 1 0 2 0 0 1 0 0 15 0 1622.9356 P61106 P61106 111 125 RAB14 Ras-related protein Rab-14 yes yes 2 0.0051426 103.91 By MS/MS 9 0 1 1 109340 109340 0 10730 1088 11211 26627 18847 18847 1 62752 0 NLTQDEMQR STLHRLYHLSREMRKNLTQDEMQRMSTRVL SREMRKNLTQDEMQRMSTRVLLATLSIPIT K N L Q R M 0 1 1 1 0 2 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 9 0 1133.5135 Q14152 Q14152 309 317 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 8.3368E-32 271.48 By MS/MS By MS/MS 3.1 0.943 3 4 2 1 7 3 7656500 7423000 233540 10731 1409 11212;11213 26628;26629;26630;26631;26632;26633;26634;26635;26636;26637 18848;18849;18850;18851;18852;18853 18852 1090 6 211650 324550 NLTVSNTR TKVPENLLPFAVQCRNLTVSNTRTVLLTPE PFAVQCRNLTVSNTRTVLLTPEIYVDQNIH R N L T R T 0 1 2 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 8 0 903.47739 Q14139 Q14139 204 211 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.051613 90.709 By MS/MS 3.5 0.5 1 1 2 1452400 1452400 0 10732 1408 11214 26638;26639 18854 18854 1 38845 0 NLTWTLSNLCR LAVPDMSSLACGYLRNLTWTLSNLCRNKNP GYLRNLTWTLSNLCRNKNPAPPIDAVEQIL R N L C R N 0 1 2 0 1 0 0 0 0 0 3 0 0 0 0 1 2 1 0 0 0 0 11 0 1376.6871 P52292 P52292 228 238 KPNA2 Importin subunit alpha-1 yes yes 2 1.2094E-29 265.67 By MS/MS 6 0 1 1 8005000 8005000 0 10733 983 11215 26640 18855 18855 1 62423 0 NLTYSAPLYVDITK DGAPSPMMPNEARLRNLTYSAPLYVDITKT RNLTYSAPLYVDITKTVIKEGEEQLQTQHQ R N L T K T 1 0 1 1 0 0 0 0 0 1 2 1 0 0 1 1 2 0 2 1 0 0 14 0 1596.8399 P30876 P30876 117 130 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 1.2368E-05 166.45 By MS/MS 3.5 0.5 1 1 2 1284600 1284600 0 10734 748 11216 26641;26642 18856 18856 1 33743 0 NLVDSYVAIINK FSMDPQLERQVETIRNLVDSYVAIINKSIR TIRNLVDSYVAIINKSIRDLMPKTIMHLMI R N L N K S 1 0 2 1 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 2 0 0 12 0 1347.7398 P50570 P50570 658 669 DNM2 Dynamin-2 yes yes 2 0.0053903 104.22 By MS/MS 4 0 1 1 637090 637090 0 10735 949 11217 26643 18857 18857 1 17392 0 NLVEELPQPR LHLFPDEYIPEDILKNLVEELPQPRKIPKR EDILKNLVEELPQPRKIPKRLDEYTQEEID K N L P R K 0 1 1 0 0 1 2 0 0 0 2 0 0 0 2 0 0 0 0 1 0 0 10 0 1193.6404 Q9BYD1 Q9BYD1 140 149 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2 0.0007548 134.23 By MS/MS 8.5 1.12 1 1 1 1 4 5080300 5080300 0 10736 2412 11218 26644;26645;26646;26647 18858 18858 1 1986500 0 NLVELAELELK ELIDFKTRRVAAFRKNLVELAELELKHAKG AFRKNLVELAELELKHAKGNLQLLQNCLAV K N L L K H 1 0 1 0 0 0 3 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 11 0 1269.718 Q9UNH7 Q9UNH7 376 386 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 2 2.4539E-05 173.24 By MS/MS 6 0 1 1 1036400 1036400 0 10737 2841 11219 26648 18859 18859 1 8081.9 0 NLVEQHK SLSLLDLEQKLKEIRNLVEQHKSSSWINKD EQKLKEIRNLVEQHKSSSWINKDGSKPLLC R N L H K S 0 0 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 866.46102 P56589 P56589 214 220 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 0.018671 130.04 By MS/MS 7 0 1 1 1242900 1242900 0 10738 1049 11220 26649 18860 18860 1 22212 0 NLVLLVR DEKNDRTSLNRKLDRNLVLLVREKFGDQDV SLNRKLDRNLVLLVREKFGDQDVWILPQAE R N L V R E 0 1 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 7 0 825.54362 Q9H2W6 Q9H2W6 156 162 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 0.021307 122.79 By MS/MS 8 0 1 1 4176600 4176600 0 10739 2485 11221 26650 18861 18861 1 275530 0 NLVNDDDAIVAASK QLITYKVISNEFNSRNLVNDDDAIVAASKC RNLVNDDDAIVAASKCLKMVYYANVVGGEV R N L S K C 3 0 2 3 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 0 14 0 1443.7205 Q05086 Q05086 360 373 UBE3A Ubiquitin-protein ligase E3A yes yes 2 0.0010528 122.46 By MS/MS 4 0 1 1 1730900 1730900 0 10740 1269 11222 26651 18862 18862 1 47252 0 NLVPLLLAPENLVEK GRLKDIDEDFKRELRNLVPLLLAPENLVEK NLVPLLLAPENLVEKEISGSKVTCRDLVEY R N L E K E 1 0 2 0 0 0 2 0 0 0 5 1 0 0 2 0 0 0 0 2 0 0 15 0 1660.9764 Q8NHH9 Q8NHH9 326 340 ATL2 Atlastin-2 yes yes 2;3 0.0022597 107.46 By MS/MS 6 0.707 1 2 1 4 9607300 9607300 0 10741 1975 11223 26652;26653;26654;26655 18863;18864 18864 2 76632 0 NLVQCLLEK CVRSNNYVQEPECRRNLVQCLLEKQGTPVV EPECRRNLVQCLLEKQGTPVVQGSLELERV R N L E K Q 0 0 1 0 1 1 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 1115.6009 Q7Z6M4 Q7Z6M4 72 80 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 0.00063318 150.36 By MS/MS 7 0 1 1 693060 693060 0 10742 1802 11224 26656 18865 18865 1 12385 0 NLYDLYTR QLEECRKSDAEQYLKNLYDLYTRTTNLSSK DAEQYLKNLYDLYTRTTNLSSKLMEFNLGT K N L T R T 0 1 1 1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 8 0 1056.524 O00471 O00471 306 313 EXOC5 Exocyst complex component 5 yes yes 2 0.016369 111.46 By MS/MS 5 0 1 1 686540 686540 0 10743 98 11225 26657 18866 18866 1 28220 0 NLYIISVK PVGAVINCADNTGAKNLYIISVKGIKGRLN ADNTGAKNLYIISVKGIKGRLNRLPAAGVG K N L V K G 0 0 1 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 1 0 0 8 0 948.56442 P62829 P62829 36 43 RPL23 60S ribosomal protein L23 yes yes 2 0.014976 113.26 By MS/MS By matching 10 0 2 1 1 5790700 5739800 50951 10744 1147 11226 26658;26659 18867 18867 1 6100800 1306900 NLYPSSSPYTR QGDVPTPKQFVADVKNLYPSSSPYTRNWDK ADVKNLYPSSSPYTRNWDKLVGEIKEEEKN K N L T R N 0 1 1 0 0 0 0 0 0 0 1 0 0 0 2 3 1 0 2 0 0 0 11 0 1283.6146 Q9Y2Z0 Q9Y2Z0 275 285 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.0066513 101.38 By MS/MS 7.5 0.5 1 1 2 5631300 5631300 0 10745 2907 11227 26660;26661 18868 18868 1 127530 0 NLYSDDIPHALR LSDTNMVDFAMDVYKNLYSDDIPHALREKR VYKNLYSDDIPHALREKRTTVVAQLKQLQA K N L L R E 1 1 1 2 0 0 0 0 1 1 2 0 0 0 1 1 0 0 1 0 0 0 12 0 1412.7048 P60228 P60228 60 71 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2;3 0.0017157 115.29 By MS/MS 6.5 0.5 2 2 4 18119000 18119000 0 10746 1065 11228 26662;26663;26664;26665 18869;18870;18871 18869 3 167420 0 NMAALDAADR LKSLISVIHLITAARNMAALDAADRAKKK_ ITAARNMAALDAADRAKKK___________ R N M D R A 4 1 1 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1046.4815 O14735 O14735 200 209 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes yes 2 0.00011875 157.75 By MS/MS 3.75 3.11 1 1 1 1 4 1021400 1021400 0 10747 123 11229 26666;26667;26668;26669 18872;18873;18874 18872 80 3 242120 0 NMAINPSKENLCSTFCK SEESIISQETYKQEKNMAINPSKENLCSTF AINPSKENLCSTFCKEVVRNANEEEYSIGS K N M C K E 1 0 3 0 2 0 1 0 0 1 1 2 1 1 1 2 1 0 0 0 0 0 17 1 2012.9118 CON__P02663 CON__P02663 25 41 yes yes 3 0.0057557 84.41 By MS/MS 5.5 0.5 1 1 2 4046900 4046900 0 + 10748 38 11230 26670;26671 18875 18875 22 1 140090 0 NMDAIIVDSEK TQKKYQIAVTKVLGKNMDAIIVDSEKTGRD VLGKNMDAIIVDSEKTGRDCIQYIKEQRGE K N M E K T 1 0 1 2 0 0 1 0 0 2 0 1 1 0 0 1 0 0 0 1 0 0 11 0 1233.5911 Q14683 Q14683 541 551 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00040249 146.71 By MS/MS 3 0 1 1 728950 728950 0 10749 1440 11231 26672 18876 18876 1 19029 0 NMDDDRLSR RIPRRGAEDDRGPWRNMDDDRLSRRADDDR DRGPWRNMDDDRLSRRADDDRFPRRGDDSR R N M S R R 0 2 1 3 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 9 1 1120.4931 Q14152 Q14152 1142 1150 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.03973 114.89 By MS/MS 2 0.816 1 1 1 3 906230 906230 0 10750 1409 11232 26673;26674;26675 18877 18877 1 27402 0 NMINIISR ILRKSLQAERNKPTKNMINIISRLQEVFGH ERNKPTKNMINIISRLQEVFGHAIKAAYPD K N M S R L 0 1 2 0 0 0 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 0 8 0 959.52224 P54136 P54136 72 79 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0036449 145.16 By MS/MS 5 0 1 1 1895300 1895300 0 10751 1013 11233 26676 18878 18878 1 77904 0 NMITGTAPLDGCILVVAANDGPMPQTR HYAHTDCPGHADYVKNMITGTAPLDGCILV ILVVAANDGPMPQTREHLLLARQIGVEHVV K N M T R E 3 1 2 2 1 1 0 3 0 2 2 0 2 0 3 0 3 0 0 2 0 0 27 0 2811.3718 P49411 P49411 136 162 TUFM Elongation factor Tu, mitochondrial yes yes 3 3.2322E-07 100.81 By MS/MS 7 0 1 1 415760 415760 0 10752 918 11234 26677 18879 18879 682;683 1 7429.8 0 NMLFSGTNIAAGK TDPVPDPRAVNQDKKNMLFSGTNIAAGKAM KKNMLFSGTNIAAGKAMGVVVATGVNTEIG K N M G K A 2 0 2 0 0 0 0 2 0 1 1 1 1 1 0 1 1 0 0 0 0 0 13 0 1322.6653 P16615;O14983 P16615 206 218 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 6.3113E-26 247.96 By MS/MS 3 1.41 2 2 2 2 2 10 19396000 19396000 0 10753 608 11235;11236 26678;26679;26680;26681;26682;26683;26684;26685;26686;26687 18880;18881;18882;18883;18884;18885;18886 18883 397 7 736780 0 NMLLTLEQEAK NEDLHKLWYVLLKERNMLLTLEQEAKRQRL LKERNMLLTLEQEAKRQRLPMPSPERLDKV R N M A K R 1 0 1 0 0 1 2 0 0 0 3 1 1 0 0 0 1 0 0 0 0 0 11 0 1288.6697 Q9HD33 Q9HD33 110 120 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 2 5.7339E-49 290.68 By MS/MS 9 0 2 2 846730 846730 0 10754 2567 11237;11238 26688;26689 18887;18888 18887 1543 2 485940 0 NMMAACDPR ALTVPELTQQMFDAKNMMAACDPRHGRYLT QMFDAKNMMAACDPRHGRYLTVAAVFRGRM K N M P R H 2 1 1 1 1 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 9 0 1064.4202 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;P04350;Q13509;Q3ZCM7;Q9BUF5 P68371 298 306 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 2 0.00019469 164.46 By MS/MS By matching 6.64 0.881 1 4 4 2 9 2 76219000 76171000 47852 10755 1187;490;1400;2375;451;1377;2363;1572 11239;11240;11241 26690;26691;26692;26693;26694;26695;26696;26697;26698;26699;26700 18889;18890;18891;18892;18893 18892 239;240 5 643210 152570 NMQDMVEDYR DQLKSDQSRLDSELKNMQDMVEDYRNKYED DSELKNMQDMVEDYRNKYEDEINKRTNAEN K N M Y R N 0 1 1 2 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 10 0 1299.5224 P04264;CON__P04264 P04264 258 267 KRT1 Keratin, type II cytoskeletal 1 no no 2 9.9303E-05 160.53 By matching By MS/MS 3.97 2.09 3 5 6 5 3 3 2 1 1 6 23 3960600 814630 3145900 + 10756 450;45 11242;11243;11244 26701;26702;26703;26704;26705;26706;26707;26708;26709;26710;26711;26712;26713;26714;26715;26716;26717;26718;26719;26720;26721;26722;26723;26724;26725;26726;26727;26728;26729 18894;18895;18896;18897;18898;18899;18900;18901;18902;18903;18904;18905;18906;18907;18908;18909;18910;18911;18912;18913;18914;18915;18916;18917 18905 27;28 23 94598 7170800 NMQNVEHVPLSLDR SAMLQPLLDNQVGFKNMQNVEHVPLSLDRA KNMQNVEHVPLSLDRAMRLVKDVFISAAER K N M D R A 0 1 2 1 0 1 1 0 1 0 2 0 1 0 1 1 0 0 0 2 0 0 14 0 1650.8148 P20618 P20618 185 198 PSMB1 Proteasome subunit beta type-1 yes yes 3 0.024541 71.513 By MS/MS 9 0 1 1 462140 462140 0 10757 643 11245 26730 18918 18918 1 265230 0 NMSQEQVAQK ALRNHQTPRYDNRCRNMSQEQVAQKLAKDP DNRCRNMSQEQVAQKLAKDPKPAIRFRLEQ R N M Q K L 1 0 1 0 0 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 10 0 1161.5448 Q5JPH6 Q5JPH6 169 178 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 1.0619E-28 259.82 By MS/MS 6 0 1 1 1678700 1678700 0 10758 1604 11246 26731 18919 18919 1 13091 0 NMTPSPFLR QIQYKNPWVQIMMFKNMTPSPFLRFYLDSG QIMMFKNMTPSPFLRFYLDSGEQVLVDVET K N M L R F 0 1 1 0 0 0 0 0 0 0 1 0 1 1 2 1 1 0 0 0 0 0 9 0 1061.5328 P82663 P82663 69 77 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2 0.0031059 116.73 By MS/MS 9 0 1 1 1375500 1375500 0 10759 1202 11247 26732 18920 18920 988 1 789420 0 NMVPQQALVIR YYQEAKSSKIMESFKNMVPQQALVIRNGEK ESFKNMVPQQALVIRNGEKMSINAEEVVVG K N M I R N 1 1 1 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 2 0 0 11 0 1267.7071 P05023;P50993;Q13733;P13637 P05023 163 173 ATP1A1;ATP1A2;ATP1A4;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 1.6525E-08 195.17 By MS/MS 3 1.41 2 2 2 2 2 10 16978000 16978000 0 10760 463;575 11248;11249 26733;26734;26735;26736;26737;26738;26739;26740;26741;26742 18921;18922;18923;18924;18925;18926;18927 18924 250 7 609550 0 NMVSILSSFESR SFIRDSLEKSDQLTKNMVSILSSFESRLMK LTKNMVSILSSFESRLMKLENSIIPVHKQT K N M S R L 0 1 1 0 0 0 1 0 0 1 1 0 1 1 0 4 0 0 0 1 0 0 12 0 1368.6708 Q9UPT5 Q9UPT5 41 52 EXOC7 Exocyst complex component 7 yes yes 2 0.026298 81.676 By MS/MS 5 0 1 1 61552 61552 0 10761 2853 11250 26743 18928 18928 1 2530 0 NNALNQVVLWDK VKQLFLYLSAEYSTKNNALNQVVLWDKIVL STKNNALNQVVLWDKIVLRGDNPKLLLKDM K N N D K I 1 0 3 1 0 1 0 0 0 0 2 1 0 0 0 0 0 1 0 2 0 0 12 0 1412.7412 P61009 P61009 97 108 SPCS3 Signal peptidase complex subunit 3 yes yes 2 5.7748E-07 178.46 By MS/MS 9 0 1 1 655950 655950 0 10762 1081 11251 26744 18929 18929 1 376460 0 NNAYLAQSPQLYK ASEGGANVFTVSYFKNNAYLAQSPQLYKQM FKNNAYLAQSPQLYKQMCICADFEKVFSIG K N N Y K Q 2 0 2 0 0 2 0 0 0 0 2 1 0 0 1 1 0 0 2 0 0 0 13 0 1508.7623 P14868 P14868 242 254 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 2.9808E-25 238.86 By MS/MS 3.5 2.5 1 1 2 9320300 9320300 0 10763 594 11252 26745;26746 18930;18931 18931 2 82650 0 NNCPDKTSAAAGSSSR STVSGTTQSWSSLVKNNCPDKTSAAAGSSS NCPDKTSAAAGSSSRKGSSSSVCSVASSSD K N N S R K 3 1 2 1 1 0 0 1 0 0 0 1 0 0 1 4 1 0 0 0 0 0 16 1 1621.7114 Q9ULT8 Q9ULT8 1366 1381 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 3 0.0037933 96.773 By MS/MS 2.5 0.5 1 1 2 368470 368470 0 10764 2826 11253 26747;26748 18932 18932 1 16023 0 NNDLCYWVPELVR SWFVRVENMVDQLLRNNDLCYWVPELVREK LRNNDLCYWVPELVREKRFGNWLKDARDWT R N N V R E 0 1 2 1 1 0 1 0 0 0 2 0 0 0 1 0 0 1 1 2 0 0 13 0 1676.7981 P41252 P41252 429 441 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 2.1832E-05 168.83 By MS/MS 3.5 0.5 1 1 2 636910 636910 0 10765 840 11254 26749;26750 18933;18934 18933 2 16749 0 NNEDISIIPPLFTVSVDHR FFDEESYSLLRKAQRNNEDISIIPPLFTVS ISIIPPLFTVSVDHRGTWNGPWVSTEVLAA R N N H R G 0 1 2 2 0 0 1 0 1 3 1 0 0 1 2 2 1 0 0 2 0 0 19 0 2165.1117 P51571 P51571 121 139 SSR4 Translocon-associated protein subunit delta yes yes 3 0.0010268 102.72 By MS/MS 9.5 0.5 1 1 2 274170 274170 0 10766 968 11255 26751;26752 18935;18936;18937 18937 3 264920 0 NNEVSLAALK WDVLLDHIQSAALSKNNEVSLAALKSFQEI AALSKNNEVSLAALKSFQEILQIVSPVRDS K N N L K S 2 0 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1057.5768 Q7Z3U7 Q7Z3U7 1158 1167 MON2 Protein MON2 homolog yes yes 2 0.00054942 143.03 By MS/MS 3 0 1 1 753640 753640 0 10767 1786 11256 26753 18938 18938 1 19674 0 NNFAVGYR GYQMTFDSAKSKLTRNNFAVGYRTGDFQLH AKSKLTRNNFAVGYRTGDFQLHTNVNDGTE R N N Y R T 1 1 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 8 0 939.45626 P45880 P45880 178 185 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 0.0036598 145.04 By MS/MS By matching 8.33 0.471 2 1 2 1 5352600 5288900 63676 10768 870 11257 26754;26755;26756 18939 18939 1 433480 543240 NNFEGEVTKENLLDFIK DKDGVVLFKKFDEGRNNFEGEVTKENLLDF FEGEVTKENLLDFIKHNQLPLVIEFTEQTA R N N I K H 0 0 3 1 0 0 3 1 0 1 2 2 0 2 0 0 1 0 0 1 0 0 17 1 2009.0106 P07237 P07237 214 230 P4HB Protein disulfide-isomerase yes yes 3 0.0055552 86.455 By MS/MS 6 0 1 1 2720400 2720400 0 10769 487 11258 26757 18940 18940 1 21214 0 NNFIPQPIGK VFVILSVEMASSKKKNNFIPQPIGKCKRVF SSKKKNNFIPQPIGKCKRVFQALLPYAVEE K N N G K C 0 0 2 0 0 1 0 1 0 2 0 1 0 1 2 0 0 0 0 0 0 0 10 0 1126.6135 O95071 O95071 1450 1459 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0022716 116.37 By MS/MS 2 0.816 1 1 1 3 2029800 2029800 0 10770 364 11259 26758;26759;26760 18941;18942 18942 2 90396 0 NNFLPNADMETR LKSGGLPLVLSMLTRNNFLPNADMETRRGA LTRNNFLPNADMETRRGAYLNALKIAKLLL R N N T R R 1 1 3 1 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 12 0 1420.6405 Q93008 Q93008 1133 1144 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0015802 126.71 By MS/MS 1.8 0.748 2 2 1 5 1707200 1707200 0 10771 2096 11260;11261 26761;26762;26763;26764;26765 18943;18944;18945 18944 1376 3 79125 0 NNFTDFTNVR LVENMVTVGKTILERNNFTDFTNVRMGFHM TILERNNFTDFTNVRMGFHMPPFCSISHLH R N N V R M 0 1 3 1 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 1 0 0 10 0 1226.568 Q9NQE9 Q9NQE9 121 130 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 2 8.0952E-07 185.33 By MS/MS 9.5 0.5 1 1 2 1940900 1940900 0 10772 2588 11262 26766;26767 18946 18946 1 1208600 0 NNGNWQEALQFVPK NLTLDQMIRILLCLKNNGNWQEALQFVPKR KNNGNWQEALQFVPKRKHTGFLEISQHSQE K N N P K R 1 0 3 0 0 2 1 1 0 0 1 1 0 1 1 0 0 1 0 1 0 0 14 0 1643.8056 Q7L0Y3 Q7L0Y3 365 378 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 9.7441E-05 172.17 By MS/MS 7 0 1 1 338260 338260 0 10773 1761 11263 26768 18947 18947 1 6044.7 0 NNIAMALEVTYR QALVQKRHYLFDVQRNNIAMALEVTYRERL VQRNNIAMALEVTYRERLYRVYKEVKNRLD R N N Y R E 2 1 2 0 0 0 1 0 0 1 1 0 1 0 0 0 1 0 1 1 0 0 12 0 1393.7024 P24539 P24539 172 183 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 1.32E-16 218.07 By MS/MS 9 0 1 1 1574000 1574000 0 10774 678 11264 26769 18948 18948 452 1 903360 0 NNIPYFETSAK RQVATKRAQAWCYSKNNIPYFETSAKEAIN CYSKNNIPYFETSAKEAINVEQAFQTIARN K N N A K E 1 0 2 0 0 0 1 0 0 1 0 1 0 1 1 1 1 0 1 0 0 0 11 0 1282.6194 P51149 P51149 147 157 RAB7A Ras-related protein Rab-7a yes yes 2 0.0027866 117.02 By MS/MS 9.5 0.5 1 1 2 1331000 1331000 0 10775 960 11265 26770;26771 18949 18949 1 812550 0 NNKEYLEFR SGGYPALMDCMNKLKNNKEYLEFRRERSQM CMNKLKNNKEYLEFRRERSQMLLSRRNQLL K N N F R R 0 1 2 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 9 1 1211.5935 Q9BPW8 Q9BPW8 144 152 NIPSNAP1 Protein NipSnap homolog 1 yes yes 2;3 0.0046887 140.45 By MS/MS 8 0 2 2 12255000 12255000 0 10776 2301 11266 26772;26773 18950;18951 18951 2 808480 0 NNLAGAEELFAR NVLQNPDLALRMAVRNNLAGAEELFARKFN AVRNNLAGAEELFARKFNALFAQGNYSEAA R N N A R K 3 1 2 0 0 0 2 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1303.6521 Q00610 Q00610 355 366 CLTC Clathrin heavy chain 1 yes yes 2 3.5347E-05 169.21 By MS/MS 3.5 1.12 1 1 1 1 4 3109900 3109900 0 10777 1235 11267 26774;26775;26776;26777 18952;18953;18954 18954 3 91855 0 NNLNPVWRPFK SDGNWLMVHRTEVVKNNLNPVWRPFKISLN EVVKNNLNPVWRPFKISLNSLCYGDMDKTI K N N F K I 0 1 3 0 0 0 0 0 0 0 1 1 0 1 2 0 0 1 0 1 0 0 11 1 1383.7412 O75131 O75131 185 195 CPNE3 Copine-3 yes yes 2 0.00092201 158.07 By MS/MS 6 0 1 1 3976500 3976500 0 10778 282 11268 26778 18955 18955 1 31009 0 NNNQQLAQLQK AVKFIVRKFPAVETRNNNQQLAQLQKEKSE VETRNNNQQLAQLQKEKSEILKNLALYYFT R N N Q K E 1 0 3 0 0 4 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1297.6739 Q9Y2A7 Q9Y2A7 71 81 NCKAP1 Nck-associated protein 1 yes yes 2 2.1551E-22 298.25 By MS/MS 4 0 1 1 566330 566330 0 10779 2882 11269 26779 18956 18956 1 15460 0 NNPEPWNK LLRLALFNPDVCWDRNNPEPWNKLGPNDQY PDVCWDRNNPEPWNKLGPNDQYKFYSVNVD R N N N K L 0 0 3 0 0 0 1 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 8 0 997.46174 O00483 O00483 48 55 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 2 0.014856 113.41 By MS/MS By matching 10 0 2 1 1 7498400 7463700 34632 10780 99 11270 26780;26781 18957 18957 1 7933100 888280 NNPEPWNKLGPNDQYK LLRLALFNPDVCWDRNNPEPWNKLGPNDQY NPEPWNKLGPNDQYKFYSVNVDYSKLKKER R N N Y K F 0 0 4 1 0 1 1 1 0 0 1 2 0 0 3 0 0 1 1 0 0 0 16 1 1912.9068 O00483 O00483 48 63 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes yes 3 0.0047746 107.69 By MS/MS 10 0 1 1 944560 944560 0 10781 99 11271 26782 18958 18958 1 1004000 0 NNPVHLITEEDLK LFRELMHQKAEKEMKNNPVHLITEEDLKQI MKNNPVHLITEEDLKQISTLESVSTSKKDK K N N L K Q 0 0 2 1 0 0 2 0 1 1 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1520.7835 O94874 O94874 390 402 UFL1 E3 UFM1-protein ligase 1 yes yes 2;3 0.00017686 150.51 By MS/MS 5 0 2 2 4460700 4460700 0 10782 354 11272 26783;26784 18959;18960 18960 2 183350 0 NNQGTVNWSVDDIVK SSFPDDATSPLQENRNNQGTVNWSVDDIVK NNQGTVNWSVDDIVKGINSSNVENQLQATQ R N N V K G 0 0 3 2 0 1 0 1 0 1 0 1 0 0 0 1 1 1 0 3 0 0 15 0 1687.8166 P52292 P52292 69 83 KPNA2 Importin subunit alpha-1 yes yes 2 9.3011E-64 306.44 By MS/MS 6 0 1 1 13612000 13612000 0 10783 983 11273 26785 18961 18961 1 106150 0 NNQITNNQR GKRVVMRVDFNVPMKNNQITNNQRIKAAVP FNVPMKNNQITNNQRIKAAVPSIKFCLDNG K N N Q R I 0 1 4 0 0 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 9 0 1100.5323 P00558 P00558 31 39 PGK1 Phosphoglycerate kinase 1 yes yes 2 4.0051E-08 204.42 By MS/MS 7 0 1 1 2453500 2453500 0 10784 432 11274 26786 18962 18962 1 43844 0 NNQLDPTSK KDVQLSTIELSITTRNNQLDPTSKEDFLNI LSITTRNNQLDPTSKEDFLNICIEPDTISK R N N S K E 0 0 2 1 0 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 9 0 1015.4934 Q53H12 Q53H12 319 327 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.029991 91.087 By MS/MS By matching 6.33 0.471 2 1 2 1 6101300 6075900 25335 10785 1587 11275 26787;26788;26789 18963 18963 1 63775 77702 NNQNPWTFER GTLEKMRKDQEERERNNQNPWTFERIATAN EERERNNQNPWTFERIATANMLGIRKVLSP R N N E R I 0 1 3 0 0 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 10 0 1304.5898 Q9NX20 Q9NX20 208 217 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 2 1.0315E-10 206.43 By MS/MS By matching 8 0 2 1 1 2220600 2198600 21929 10786 2676 11276 26790;26791 18964 18964 1 145040 187080 NNQSALLYGTLSSEAPQDGESTR KTIGGRSEVFLKMGKNNQSALLYGTLSSEA GTLSSEAPQDGESTRSGYCAMISRIPRGAF K N N T R S 2 1 2 1 0 2 2 2 0 0 3 0 0 0 1 4 2 0 1 0 0 0 23 0 2437.1357 Q9Y375 Q9Y375 157 179 NDUFAF1 Complex I intermediate-associated protein 30, mitochondrial yes yes 2 0.00011845 96.435 By MS/MS 8 0 1 1 776960 776960 0 10787 2915 11277 26792 18965 18965 1 51256 0 NNRPSEGPLQTR NLIQQCTAFLLDALKNNRPSEGPLQTRLLE ALKNNRPSEGPLQTRLLEMNLMHAPQVADA K N N T R L 0 2 2 0 0 1 1 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 12 1 1367.6906 Q00610 Q00610 572 583 CLTC Clathrin heavy chain 1 yes yes 3 0.0081979 103.46 By MS/MS 2 0.816 1 1 1 3 566740 566740 0 10788 1235 11278 26793;26794;26795 18966 18966 1 18731 0 NNSELLNNLGNFINR EGQDSAFSWTDLLLKNNSELLNNLGNFINR NNSELLNNLGNFINRAGMFVSKFFGGYVPE K N N N R A 0 1 6 0 0 0 1 1 0 1 3 0 0 1 0 1 0 0 0 0 0 0 15 0 1730.87 P56192 P56192 642 656 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 9.4999E-08 191.79 By MS/MS 4 0 1 1 252400 252400 0 10789 1042 11279 26796 18967;18968 18967 2 6890.2 0 NNSFVNEIISR ITIKLKQLKAEVIAKNNSFVNEIISRIKVT VIAKNNSFVNEIISRIKVTT__________ K N N S R I 0 1 3 0 0 0 1 0 0 2 0 0 0 1 0 2 0 0 0 1 0 0 11 0 1291.6521 P43246 P43246 919 929 MSH2 DNA mismatch repair protein Msh2 yes yes 2 4.6422E-07 187.42 By MS/MS 4 0 1 1 2290200 2290200 0 10790 862 11280 26797 18969 18969 1 62520 0 NNSGEEFDCAFR EKMKVINTGIKVWCRNNSGEEFDCAFRLAQ WCRNNSGEEFDCAFRLAQEGIYTLYPFINS R N N F R L 1 1 2 1 1 0 2 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 12 0 1444.5677 Q08J23 Q08J23 591 602 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 3.253E-69 310.53 By MS/MS 4 0 1 1 1866600 1866600 0 10791 1295 11281 26798 18970 18970 1 50956 0 NNTQVLINCR EFNTGPLSVLTQSVKNNTQVLINCRNNKKL TQSVKNNTQVLINCRNNKKLLGRVKAFDRH K N N C R N 0 1 3 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1230.6139 P62316 P62316 38 47 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 5.6298E-06 178.55 By MS/MS 10 0 1 1 1422400 1422400 0 10792 1130 11282 26799 18971 18971 0 1511900 0 NNVKWELNPEIVAR TVKFLKSCRLEVGMKNNVKWELNPEIVARH KNNVKWELNPEIVARHFFKNLGVVVAPHTL K N N A R H 1 1 3 0 0 0 2 0 0 1 1 1 0 0 1 0 0 1 0 2 0 0 14 1 1680.8948 Q9BYD2 Q9BYD2 178 191 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 3 0.0068652 86.756 By MS/MS 8 0 1 1 414250 414250 0 10793 2413 11283 26800 18972 18972 1 27328 0 NNVNVASLTQSEIR EVQLKDLILADYGKKNNVNVASLTQSEIRD KNNVNVASLTQSEIRDIILGMEISAPSQQR K N N I R D 1 1 3 0 0 1 1 0 0 1 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1543.7954 Q6P2Q9 Q6P2Q9 1995 2008 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 6.3234E-18 218.94 By MS/MS 2 0 1 1 470480 470480 0 10794 1706 11284 26801 18973 18973 1 23385 0 NNWEVSALSR LDGYLKTSALSDETKNNWEVSALSRAAQKG SDETKNNWEVSALSRAAQKGFNKVVLKHLK K N N S R A 1 1 2 0 0 0 1 0 0 0 1 0 0 0 0 2 0 1 0 1 0 0 10 0 1174.5731 P78527 P78527 811 820 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.7716E-10 200.71 By MS/MS 2 0.816 1 1 1 3 1995700 1995700 0 10795 1197 11285 26802;26803;26804 18974;18975;18976;18977 18974 4 86071 0 NPADLPK KFSVSPVVRVAVEAKNPADLPKLVEGLKRL VRVAVEAKNPADLPKLVEGLKRLAKSDPMV K N P P K L 1 0 1 1 0 0 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 7 0 753.4021 P13639 P13639 513 519 EEF2 Elongation factor 2 yes yes 2 0.027209 116.88 By MS/MS By matching 4.33 0.471 2 1 2 1 15635000 15616000 19201 10796 576 11286 26805;26806;26807 18978;18979 18979 2 447970 40122 NPALYASNVR IEFLPVYSPSEEEKRNPALYASNVRRVMAE EEEKRNPALYASNVRRVMAEALGVSVTDYT R N P V R R 2 1 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1103.5724 Q8NF37 Q8NF37 286 295 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 1.057E-05 174.41 By MS/MS 6 0 1 1 0 0 0 10797 1967 11287 26808 18980 18980 1 0 0 NPAPPIDAVEQILPTLVR LRNLTWTLSNLCRNKNPAPPIDAVEQILPT PPIDAVEQILPTLVRLLHHDDPEVLADTCW K N P V R L 2 1 1 1 0 1 1 0 0 2 2 0 0 0 4 0 1 0 0 2 0 0 18 0 1942.0888 P52292 P52292 241 258 KPNA2 Importin subunit alpha-1 yes yes 2;3 0.00024139 134.37 By MS/MS 6 0 2 2 2830600 2830600 0 10798 983 11288 26809;26810 18981;18982 18981 2 22073 0 NPATTNQTEFER RKGSQITQQSTNQSRNPATTNQTEFERVF_ QSRNPATTNQTEFERVF_____________ R N P E R V 1 1 2 0 0 1 2 0 0 0 0 0 0 1 1 0 3 0 0 0 0 0 12 0 1406.6426 P50750 P50750 359 370 CDK9 Cyclin-dependent kinase 9 yes yes 2 9.3833E-33 252.97 By MS/MS 7 0 1 1 1417500 1417500 0 10799 951 11289 26811 18983 18983 1 25330 0 NPAVLSAASFDGR PTNTQWCFDIQWCPRNPAVLSAASFDGRIS PRNPAVLSAASFDGRISVYSIMGGSTDGLR R N P G R I 3 1 1 1 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 13 0 1303.6521 O94979 O94979 315 327 SEC31A Protein transport protein Sec31A yes yes 2 1.965E-12 212.09 By MS/MS 3.5 0.5 1 1 2 1805900 1805900 0 10800 362 11290 26812;26813 18984;18985 18984 2 47142 0 NPCTEQILK GFVVGYTSSGNPIFRNPCTEQILKLLDNLL GNPIFRNPCTEQILKLLDNLLALIRTHNTL R N P L K L 0 0 1 0 1 1 1 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 9 0 1101.5488 Q9HAV4 Q9HAV4 763 771 XPO5 Exportin-5 yes yes 2 0.026292 93.178 By MS/MS 3 0 1 1 685820 685820 0 10801 2546 11291 26814 18986 18986 1 17903 0 NPDDITNEEYGEFYK IDQEELNKTKPIWTRNPDDITNEEYGEFYK NPDDITNEEYGEFYKSLTNDWEDHLAVKHF R N P Y K S 0 0 2 2 0 0 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1832.7741 P07900 P07900 300 314 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 3.2242E-77 319.37 By MS/MS By MS/MS 4.12 1.83 1 1 3 1 1 1 7 1 39751000 39695000 55696 10802 494 11292 26815;26816;26817;26818;26819;26820;26821;26822 18987;18988;18989;18990;18991;18992 18991 6 1071400 116380 NPDDITQEEYGEFYK IDQEELNKTKPIWTRNPDDITQEEYGEFYK NPDDITQEEYGEFYKSLTNDWEDHLAVKHF R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 1.4137E-147 387.99 By MS/MS 4.11 1.79 1 1 1 2 2 1 1 9 88771000 88771000 0 10803 501 11293 26823;26824;26825;26826;26827;26828;26829;26830;26831 18993;18994;18995;18996;18997 18997 5 2752400 0 NPDIFTEVANCCIR EINYILRVLGPAACRNPDIFTEVANCCIRI RNPDIFTEVANCCIRIALPAPRGSGTASDD R N P I R I 1 1 2 1 2 0 1 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 14 0 1707.7709 Q7Z6Z7 Q7Z6Z7 1881 1894 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.04164 72.958 By MS/MS 1.5 0.5 1 1 2 152320 152320 0 10804 1803 11294 26832;26833 18998 18998 1 7497.5 0 NPELPNAAQAQK EILFYRKTIGYKVPRNPELPNAAQAQKEEQ VPRNPELPNAAQAQKEEQLKIDEAESLNDE R N P Q K E 3 0 2 0 0 2 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 12 0 1279.6521 O60264 O60264 803 814 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.00014887 155.06 By MS/MS 3 0 1 1 641070 641070 0 10805 240 11295 26834 18999 18999 1 16735 0 NPELQNLLLDDFFK IRSVFLGKIKDAFDRNPELQNLLLDDFFKS RNPELQNLLLDDFFKSAVENCQDSWRRAVS R N P F K S 0 0 2 2 0 1 1 0 0 0 4 1 0 2 1 0 0 0 0 0 0 0 14 0 1704.8723 P52209 P52209 383 396 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 1.0038E-05 197.38 By MS/MS 6 0 1 1 547380 547380 0 10806 981 11296 26835 19000 19000 1 4268.5 0 NPEPELLVR VGLSFCGADVGGFFKNPEPELLVRWYQMGA VGGFFKNPEPELLVRWYQMGAYQPFFRAHA K N P V R W 0 1 1 0 0 0 2 0 0 0 2 0 0 0 2 0 0 0 0 1 0 0 9 0 1065.5819 Q14697 Q14697 654 662 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0069542 111.46 By MS/MS 3.5 0.5 1 1 2 8075900 8075900 0 10807 1443 11297 26836;26837 19001 19001 1 220340 0 NPEQVDLYQFMAK SITANYTDQWERWWKNPEQVDLYQFMAKDN WKNPEQVDLYQFMAKDNVPFHSLVFPCSAL K N P A K D 1 0 1 1 0 2 1 0 0 0 1 1 1 1 1 0 0 0 1 1 0 0 13 0 1581.7497 P56192 P56192 542 554 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 3.4846E-05 164.04 By MS/MS 4 0 1 1 878240 878240 0 10808 1042 11298 26838 19002 19002 1 23975 0 NPEVGLKPVWYSPK PEAQEEMKEVAKHPKNPEVGLKPVWYSPKV KNPEVGLKPVWYSPKVFIEGADAETFSEGE K N P P K V 0 0 1 0 0 0 1 1 0 0 1 2 0 0 3 1 0 1 1 2 0 0 14 1 1612.8613 P07814 P07814 536 549 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 7.109E-05 168.76 By MS/MS 3.8 0.748 2 2 1 5 6745700 6745700 0 10809 493 11299 26839;26840;26841;26842;26843 19003;19004 19004 2 180920 0 NPFDTFFGQR HGDPHAMFAEFFGGRNPFDTFFGQRNGEEG FFGGRNPFDTFFGQRNGEEGMDIDDPFSGF R N P Q R N 0 1 1 1 0 1 0 1 0 0 0 0 0 3 1 0 1 0 0 0 0 0 10 0 1227.5673 P25685 P25685 110 119 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.0046888 125.82 By MS/MS 7.5 0.5 1 1 2 580000 580000 0 10810 686 11300 26844;26845 19005 19005 1 15328 0 NPFGNAGLLLGEAGK MDKGKELSGLGSALKNPFGNAGLLLGEAGK NPFGNAGLLLGEAGKQLRRRAGLGSGLSLS K N P G K Q 2 0 2 0 0 0 1 4 0 0 3 1 0 1 1 0 0 0 0 0 0 0 15 0 1456.7674 P49748 P49748 493 507 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00010955 136.24 By MS/MS 5.5 0.5 1 1 2 629810 629810 0 10811 929 11301 26846;26847 19006 19006 1 14322 0 NPFLAAVTTNR RLKSYENQKPPFDAKNPFLAAVTTNRKLNQ FDAKNPFLAAVTTNRKLNQGTERHLMHLEL K N P N R K 2 1 2 0 0 0 0 0 0 0 1 0 0 1 1 0 2 0 0 1 0 0 11 0 1202.6408 P16435 P16435 280 290 POR NADPH--cytochrome P450 reductase yes yes 2 5.5531E-22 238.01 By MS/MS 5.5 0.5 1 1 2 1857700 1857700 0 10812 607 11302 26848;26849 19007 19007 1 63757 0 NPGSLWILK EVFTYFFKRTQYFRKNPGSLWILKLSCTVL TQYFRKNPGSLWILKLSCTVLAMGLMVPFS K N P L K L 0 0 1 0 0 0 0 1 0 1 2 1 0 0 1 1 0 1 0 0 0 0 9 0 1026.5862 Q6P4A7 Q6P4A7 280 288 SFXN4 Sideroflexin-4 yes yes 2 1.4432E-06 190.62 By MS/MS 8 0 1 1 395210 395210 0 10813 1709 11303 26850 19008 19008 1 26072 0 NPITSPVVTQK IFFEQTETESTLSLKNPITSPVVTQKKVPD LSLKNPITSPVVTQKKVPDNCCRREPMLVR K N P Q K K 0 0 1 0 0 1 0 0 0 1 0 1 0 0 2 1 2 0 0 2 0 0 11 0 1182.6608 P04035 P04035 352 362 HMGCR 3-hydroxy-3-methylglutaryl-coenzyme A reductase yes yes 2 0.00031904 150.1 By MS/MS 1.5 0.5 1 1 2 287250 287250 0 10814 441 11304 26851;26852 19009 19009 1 14096 0 NPKGEVVEGDPDKVLR VLIITFQAQLVMVVRNPKGEVVEGDPDKVL PKGEVVEGDPDKVLRMLYVWALCRDQDELN R N P L R M 0 1 1 2 0 0 2 2 0 0 1 2 0 0 2 0 0 0 0 3 0 0 16 2 1750.9214 O43615 O43615 403 418 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.0019146 112.67 By MS/MS 7 0 1 1 4608400 4608400 0 10815 209 11305 26853 19010 19010 1 82353 0 NPLEQAFR HWGEVEYHVISTFKRNPLEQAFRRPNVNLT VISTFKRNPLEQAFRRPNVNLTSNHLLYHY R N P F R R 1 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 8 0 973.49813 Q8WVX9 Q8WVX9 329 336 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.0033565 158.07 By MS/MS 6 0 3 3 0 0 0 10816 2036 11306 26854;26855;26856 19011;19012;19013 19012 3 0 0 NPLIAGK SKMFLRGDSVIVVLRNPLIAGK________ DSVIVVLRNPLIAGK_______________ R N P G K - 1 0 1 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 7 0 711.42792 P62316 P62316 112 118 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 1;2 0.044114 111.28 By MS/MS 10 0 2 2 438600 438600 0 10817 1130 11307 26857;26858 19014;19015 19014 1 466190 0 NPNTSEPQHLLVMK IPFNSTNKYQLSIHKNPNTSEPQHLLVMKG KNPNTSEPQHLLVMKGAPERILDRCSSILL K N P M K G 0 0 2 0 0 1 1 0 1 0 2 1 1 0 2 1 1 0 0 1 0 0 14 0 1606.8137 P05023 P05023 495 508 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2;3 0.002291 110.15 By MS/MS 2.2 1.17 2 1 1 1 5 2890700 2890700 0 10818 463 11308 26859;26860;26861;26862;26863 19016;19017 19016 252 2 132740 0 NPPAFTELQLPR GAVLQIGDVKYKVERNPPAFTELQLPRYIM VERNPPAFTELQLPRYIMAGFPVCPKLSLE R N P P R Y 1 1 1 0 0 1 1 0 0 0 2 0 0 1 3 0 1 0 0 0 0 0 12 0 1381.7354 Q6L8Q7 Q6L8Q7 160 171 PDE12 2,5-phosphodiesterase 12 yes yes 2 2.3626E-16 214.67 By MS/MS 6.5 1.71 1 1 1 1 1 1 6 9914800 9914800 0 10819 1687 11309 26864;26865;26866;26867;26868;26869 19018;19019;19020 19019 3 306690 0 NPPGFAFVEFEDPR AFGYYGPLRSVWVARNPPGFAFVEFEDPRD RNPPGFAFVEFEDPRDAADAVRELDGRTLC R N P P R D 1 1 1 1 0 0 2 1 0 0 0 0 0 3 3 0 0 0 0 1 0 0 14 0 1620.7573 P84103 P84103 44 57 SRSF3 Serine/arginine-rich splicing factor 3 no no 2 0.0015123 118.87 By MS/MS 9 0.816 1 1 1 3 709500 709500 0 10820 1219 11310 26870;26871;26872 19021;19022 19021 2 224400 0 NPPLAEALLSGDLEK MLLANPHELSLLKERNPPLAEALLSGDLEK NPPLAEALLSGDLEKFSRVLVEQQQDRARR R N P E K F 2 0 1 1 0 0 2 1 0 0 4 1 0 0 2 1 0 0 0 0 0 0 15 0 1565.8301 Q5TDH0 Q5TDH0 156 170 DDI2 Protein DDI1 homolog 2 yes yes 2 3.0665E-38 258.23 By MS/MS 6.5 0.5 1 1 2 1652500 1652500 0 10821 1639 11311 26873;26874 19023;19024 19023 2 14110 0 NPPSSDELDGIIK RLFDPINLVFPPGGRNPPSSDELDGIIKTI GRNPPSSDELDGIIKTIASELNVAAVDTNL R N P I K T 0 0 1 2 0 0 1 1 0 2 1 1 0 0 2 2 0 0 0 0 0 0 13 0 1383.6882 Q9UP83 Q9UP83 507 519 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.0014727 125.54 By MS/MS 4.5 0.5 1 1 2 993880 993880 0 10822 2850 11312 26875;26876 19025 19025 1 30203 0 NPQETAER MLQNMASIKTTKELKNPQETAERVGLAALI KTTKELKNPQETAERVGLAALIIQDFKGLL K N P E R V 1 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 8 0 943.43592 Q5T160 Q5T160 419 426 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.010733 118.74 By MS/MS 6 0 1 1 681750 681750 0 10823 1624 11313 26877 19026 19026 1 5316.3 0 NPQNSSQSADGLR KPTFSQTIALLNIYRNPQNSSQSADGLRCA YRNPQNSSQSADGLRCAVSDVEMQEHYDEF R N P L R C 1 1 2 1 0 2 0 1 0 0 1 0 0 0 1 3 0 0 0 0 0 0 13 0 1372.6331 P0DN76;Q01081 P0DN76 54 66 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 2 5.5481E-05 120.55 By MS/MS 8 0 1 1 0 0 0 10824 529 11314 26878 19027 19027 1 0 0 NPQSILKPHSPTYNDEGL LLLTGEVSWRPLVEKNPQSILKPHSPTYND SILKPHSPTYNDEGL_______________ K N P G L - 0 0 2 1 0 1 1 1 1 1 2 1 0 0 3 2 1 0 1 0 0 0 18 1 2008.9854 Q9NVA1 Q9NVA1 282 299 UQCC1 Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes yes 3 0.015542 65.175 By MS/MS 9 0 1 1 1299500 1299500 0 10825 2646 11315 26879 19028 19028 1 745810 0 NPQSTEPVLGGGEPPFHGHR SCISILVCTGVYNPRNPQSTEPVLGGGEPP EPVLGGGEPPFHGHRDLCFSPGLMEASHVV R N P H R D 0 1 1 0 0 1 2 4 2 0 1 0 0 1 4 1 1 0 0 1 0 0 20 0 2112.0137 Q9BXW7 Q9BXW7 370 389 CECR5 Cat eye syndrome critical region protein 5 yes yes 3 0.01517 62.438 By MS/MS 7 0 1 1 4578400 4578400 0 10826 2404 11316 26880 19029 19029 1 81818 0 NPQSYLYLVK EGGEEETLRRLGLERNPQSYLYLVKGQCAK LGLERNPQSYLYLVKGQCAKVSSINDKSDW R N P V K G 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 1 0 0 2 1 0 0 10 0 1223.655 O00159 O00159 260 269 MYO1C Unconventional myosin-Ic yes yes 2 2.0409E-10 199.46 By MS/MS 4 0 1 1 2344700 2344700 0 10827 72 11317 26881 19030 19030 1 64007 0 NPSTSLGPTLEPEEVVNR TTCLCPNFVNTGFIKNPSTSLGPTLEPEEV TSLGPTLEPEEVVNRLMHGILTEQKMIFIP K N P N R L 0 1 2 0 0 0 3 1 0 0 2 0 0 0 3 2 2 0 0 2 0 0 18 0 1937.9694 Q8NBQ5 Q8NBQ5 228 245 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 1.5364E-07 155.09 By MS/MS 9 0.816 1 1 1 3 2293800 2293800 0 10828 1944 11318 26882;26883;26884 19031 19031 1 275440 0 NPSTVEAFDLAQSNSEHSR WDLDFYTKRFQELQRNPSTVEAFDLAQSNS VEAFDLAQSNSEHSRHWFFKGQLHVDGQKL R N P S R H 2 1 2 1 0 1 2 0 1 0 1 0 0 1 1 4 1 0 0 1 0 0 19 0 2087.9508 O15067 O15067 213 231 PFAS Phosphoribosylformylglycinamidine synthase yes yes 3 0.049657 54.355 By MS/MS 3 0 1 1 684700 684700 0 10829 145 11319 26885 19032 19032 1 17874 0 NPSVIDKQDKD ENDAKKIEALLNLPRNPSVIDKQDKD____ NLPRNPSVIDKQDKD_______________ R N P K D - 0 0 1 3 0 1 0 0 0 1 0 2 0 0 1 1 0 0 0 1 0 0 11 2 1257.6201 Q9NPL8 Q9NPL8 275 285 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2;3 0.0008472 161.51 By MS/MS 8.71 1.03 1 2 2 2 7 8106200 8106200 0 10830 2583 11320 26886;26887;26888;26889;26890;26891;26892 19033;19034 19033 2 838360 0 NPVCANR DVEQQFKYTQPNICRNPVCANRRRFLLDTN YTQPNICRNPVCANRRRFLLDTNKSRFVDF R N P N R R 1 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 7 0 829.38647 Q14566 Q14566 182 188 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.006677 170.31 By MS/MS 4 0 1 1 1102700 1102700 0 10831 1436 11321 26893 19035 19035 1 30103 0 NPVTIFSLATNEMWR GRVGQDPVLRQVEGKNPVTIFSLATNEMWR NPVTIFSLATNEMWRSGDSEVYQLGDVSQK K N P W R S 1 1 2 0 0 0 1 0 0 1 1 0 1 1 1 1 2 1 0 1 0 0 15 0 1777.8821 Q04837 Q04837 52 66 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.015652 79.492 By MS/MS 10 0 1 1 21083 21083 0 10832 1267 11322 26894 19036 19036 1030 1 22409 0 NPYLSVK PIRHFMELVTCGLSKNPYLSVKQKVEHIEW LVTCGLSKNPYLSVKQKVEHIEWFRNYFNE K N P V K Q 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 7 0 819.44905 Q92665 Q92665 361 367 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.047769 106.36 By MS/MS 7 0 1 1 0 0 0 10833 2073 11323 26895 19037 19037 1 0 0 NPYTIFHQALK KYHAASAEEQATIERNPYTIFHQALKNCEP TIERNPYTIFHQALKNCEPMIGLVPILKGG R N P L K N 1 0 1 0 0 1 0 0 1 1 1 1 0 1 1 0 1 0 1 0 0 0 11 0 1330.7034 Q9Y2R9 Q9Y2R9 140 150 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 5.6727E-07 185.6 By MS/MS 8 0 1 1 876220 876220 0 10834 2899 11324 26896 19038 19038 1 57804 0 NQAAIQGRPPYAASAEEVAK RTFGRGGRYYGRGYKNQAAIQGRPPYAASA QGRPPYAASAEEVAKELKSKSGESKSSAMS K N Q A K E 6 1 1 0 0 2 2 1 0 1 0 1 0 0 2 1 0 0 1 1 0 0 20 1 2070.0494 Q9NZB2 Q9NZB2 1010 1029 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 3 0.00034318 106.93 By MS/MS 3 0 1 1 1206800 1206800 0 10835 2709 11325 26897 19039 19039 1 31504 0 NQALKEAGVFVPR AGACANQASETAVAKNQALKEAGVFVPRSF AKNQALKEAGVFVPRSFDELGEIIQSVYED K N Q P R S 2 1 1 0 0 1 1 1 0 0 1 1 0 1 1 0 0 0 0 2 0 0 13 1 1427.7885 P53396 P53396 776 788 ACLY ATP-citrate synthase yes yes 2;3 0.00036728 158.56 By MS/MS 4 0.707 1 2 1 4 12819000 12819000 0 10836 1001 11326 26898;26899;26900;26901 19040;19041 19041 2 352530 0 NQALNIAWQK KSKILTTIEDLDQKKNQALNIAWQKVNKDF LDQKKNQALNIAWQKVNKDFGSIFSTLLPG K N Q Q K V 2 0 2 0 0 2 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1184.6302 O95347 O95347 1027 1036 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 2.7448E-09 180.93 By MS/MS 3 0 1 1 746070 746070 0 10837 385 11327 26902 19042 19042 0 19476 0 NQCTQVVQER QKQALEASNRIQESKNQCTQVVQERESLLV IQESKNQCTQVVQERESLLVKIKVLEQDKA K N Q E R E 0 1 1 0 1 3 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 10 0 1260.5881 P15924 P15924 1803 1812 DSP Desmoplakin yes yes 2 0.00057874 166.07 By MS/MS By matching 2.33 0.471 2 1 2 1 1523300 1481700 41578 10838 603 11328 26903;26904;26905 19043 19043 1 66768 35005 NQDDFECVTTLEGHENEVK LASASFDATTCIWKKNQDDFECVTTLEGHE FECVTTLEGHENEVKSVAWAPSGNLLATCS K N Q V K S 0 0 2 2 1 1 4 1 1 0 1 1 0 1 0 0 2 0 0 2 0 0 19 0 2262.9699 O76071 O76071 91 109 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 3 0.011025 68.525 By MS/MS 8 0.816 1 1 1 3 3195000 3195000 0 10839 345 11329 26906;26907;26908 19044 19044 1 313320 0 NQDLAPNSAEQASILSLVTK PAPDETSFSEALLKRNQDLAPNSAEQASIL PNSAEQASILSLVTKINNVIDNLIVAPGTF R N Q T K I 3 0 2 1 0 2 1 0 0 1 3 1 0 0 1 3 1 0 0 1 0 0 20 0 2098.0906 Q12905 Q12905 61 80 ILF2 Interleukin enhancer-binding factor 2 yes yes 2;3 2.7306E-12 163 By MS/MS 7 0 2 2 1523200 1523200 0 10840 1314 11330 26909;26910 19045;19046 19045 2 27220 0 NQDNLQGWNK ANAQKNKFLIDGFPRNQDNLQGWNKTMDGK DGFPRNQDNLQGWNKTMDGKADVSFVLFFD R N Q N K T 0 0 3 1 0 2 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 10 0 1215.5632 P30085 P30085 97 106 CMPK1 UMP-CMP kinase yes yes 2 0.0067763 101.65 By MS/MS 9 0 1 1 385070 385070 0 10841 735 11331 26911 19047 19047 1 220990 0 NQEADQHSAR HRSLRTAALSLKLLKNQEADQHSARLFIQS LKLLKNQEADQHSARLFIQSLEGLLPRLLS K N Q A R L 2 1 1 1 0 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 10 0 1154.5065 Q5TH69 Q5TH69 665 674 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 0.0065079 102.52 By MS/MS 2 0 1 1 35022 35022 0 10842 1642 11332 26912 19048 19048 1 1740.8 0 NQEADVQEVK KNRSAAAVKNEKEQKNQEADVQEVKASTLS EKEQKNQEADVQEVKASTLSPGGGVTVFFH K N Q V K A 1 0 1 1 0 2 2 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 10 0 1158.5517 Q63HN8 Q63HN8 360 369 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 0.00091704 126.71 By MS/MS 1 0 1 1 138360 138360 0 10843 1666 11333 26913 19049 19049 1 6760 0 NQEDIILFR SLYPHMYARAYINFKNQEDIILFRDRFDGY AYINFKNQEDIILFRDRFDGYVFLDNKGQE K N Q F R D 0 1 1 1 0 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 9 0 1146.6033 Q9BZI7 Q9BZI7 103 111 UPF3B Regulator of nonsense transcripts 3B yes yes 2 0.00066173 149.72 By MS/MS 6 0 1 1 1348300 1348300 0 10844 2423 11334 26914 19050 19050 1 10514 0 NQEIPHK SPDIKTLDQIRTIERNQEIPHKGAFCDLVW DQIRTIERNQEIPHKGAFCDLVWSDPEDVD R N Q H K G 0 0 1 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 7 0 864.44537 O00743 O00743 182 188 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 0.027209 116.88 By MS/MS 9 0.816 1 1 1 3 539350 539350 0 10845 106 11335 26915;26916;26917 19051 19051 1 78799 0 NQELEVVR EKQEHVKLQKLMEKKNQELEVVRQQRERLQ QKLMEKKNQELEVVRQQRERLQEELSQAES K N Q V R Q 0 1 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 985.51926 Q14203 Q14203 399 406 DCTN1 Dynactin subunit 1 yes yes 2 0.0016027 163.15 By MS/MS 3 0 1 1 2636200 2636200 0 10846 1420 11336 26918 19052 19052 1 68818 0 NQEQEKVER ELLGQGLLLRSLQERNQEQEKVERRRQVPF RSLQERNQEQEKVERRRQVPFHLHINLELL R N Q E R R 0 1 1 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 9 1 1158.5629 Q99613;B5ME19 Q99613 659 667 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.016412 125.48 By MS/MS 4 0 1 1 197680 197680 0 10847 2275 11337 26919 19053 19053 1 5396.5 0 NQGDEEGTEIDTLQFR GLIPIHADPRLFEYRNQGDEEGTEIDTLQF QGDEEGTEIDTLQFRLQVRCTRNPHAAKDS R N Q F R L 0 1 1 2 0 2 3 2 0 1 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1850.8282 O15160 O15160 126 141 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 2.7814E-109 355.81 By MS/MS 7.5 0.5 1 1 2 7100300 7100300 0 10848 155 11338 26920;26921 19054 19054 1 147470 0 NQGETPTTEVPAPFFLPASLSANNTPTR REEGKALLRQILQLRNQGETPTTEVPAPFF FFLPASLSANNTPTRRVSPLNLSSVTP___ R N Q T R R 3 1 3 0 0 1 2 1 0 0 2 0 0 2 5 2 5 0 0 1 0 0 28 0 2956.4567 Q9UJX2 Q9UJX2 558 585 CDC23 Cell division cycle protein 23 homolog yes yes 3 5.1414E-06 87.196 By MS/MS 6 0 1 1 1885500 1885500 0 10849 2802 11339 26922 19055 19055 1 14703 0 NQGFDVVLVDTAGR KDAAGIAMEAIAFARNQGFDVVLVDTAGRM RNQGFDVVLVDTAGRMQDNAPLMTALAKLI R N Q G R M 1 1 1 2 0 1 0 2 0 0 1 0 0 1 0 0 1 0 0 3 0 0 14 0 1489.7525 P08240 P08240 511 524 SRPR Signal recognition particle receptor subunit alpha yes yes 2 3.0504E-17 203.88 By MS/MS 3.75 2.38 1 1 1 1 4 452700 452700 0 10850 502 11340 26923;26924;26925;26926 19056;19057;19058 19057 3 11647 0 NQGGGLSSSGAGEGQGPK KPQKQNDGQRKDPSKNQGGGLSSSGAGEGQ GGLSSSGAGEGQGPKKQTRLGLEAKKEENL K N Q P K K 1 0 1 0 0 2 1 7 0 0 1 1 0 0 1 3 0 0 0 0 0 0 18 0 1586.7285 P07814 P07814 992 1009 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.9815E-44 269.05 By MS/MS By MS/MS 3.6 0.8 3 1 1 4 1 8883500 8816800 66684 10851 493 11341 26927;26928;26929;26930;26931 19059;19060;19061;19062 19061 4 234490 95571 NQGGYGGSSSSSSYGSGR SGPYGGGGQYFAKPRNQGGYGGSSSSSSYG GYGGSSSSSSYGSGRRF_____________ R N Q G R R 0 1 1 0 0 1 0 6 0 0 0 0 0 0 0 7 0 0 2 0 0 0 18 0 1693.6928 P09651 P09651 353 370 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 2 1.1708E-25 228.76 By MS/MS By matching 8 0 2 1 1 2974000 2924000 50010 10852 519 11342 26932;26933 19063 19063 1 192900 426650 NQIGDKEK IDTRNELESYAYSLKNQIGDKEKLGGKLSS SYAYSLKNQIGDKEKLGGKLSSEDKETMEK K N Q E K L 0 0 1 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 8 1 930.47706 P11021 P11021 574 581 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.028183 143.89 By MS/MS 6 0 1 1 503360 503360 0 10853 545 11343 26934 19064 19064 1 3925.2 0 NQIVTILQDR EKCKPQLLNFPPYTRNQIVTILQDRLNQVS PPYTRNQIVTILQDRLNQVSRDQVLDNAAV R N Q D R L 0 1 1 1 0 2 0 0 0 2 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1198.667 Q99741 Q99741 349 358 CDC6 Cell division control protein 6 homolog yes yes 2 0.0046888 108.47 By MS/MS 6.5 0.5 1 1 2 1328500 1328500 0 10854 2289 11344 26935;26936 19065 19065 1 11689 0 NQLELAAR AEMTRQLREREQRMRNQLELAARGPLRQTF EREQRMRNQLELAARGPLRQTFTHNPLLQP R N Q A R G 2 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 913.49813 Q15070 Q15070 387 394 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2 0.0025878 153.04 By MS/MS By matching 7.75 0.829 2 1 1 3 1 24565000 24495000 70249 10855 1477 11345 26937;26938;26939;26940 19066 19066 1 593340 288390 NQLPLVVDAICTR VRTQDGETALQLAIRNQLPLVVDAICTRGA IRNQLPLVVDAICTRGADMSVPDEKGNPPL R N Q T R G 1 1 1 1 1 1 0 0 0 1 2 0 0 0 1 0 1 0 0 2 0 0 13 0 1497.7973 Q9P2R3 Q9P2R3 665 677 ANKFY1 Rabankyrin-5 yes yes 2 2.9225E-05 166.11 By MS/MS 4 0 1 1 1099000 1099000 0 10856 2740 11346 26941 19067 19067 1 30001 0 NQLSPQLLR DLVVVLVDVSDKWTRNQLSPQLLRCLTKYS SDKWTRNQLSPQLLRCLTKYSQIPSVLVMN R N Q L R C 0 1 1 0 0 2 0 0 0 0 3 0 0 0 1 1 0 0 0 0 0 0 9 0 1067.6087 O75616 O75616 213 221 ERAL1 GTPase Era, mitochondrial yes yes 2 0.0067288 111.95 By MS/MS By matching 7.75 0.829 2 1 1 3 1 14351000 14327000 24775 10857 321 11347 26942;26943;26944;26945 19068 19068 1 375770 101710 NQLTAMSSVLAK PIGPHLQSMPSEQIRNQLTAMSSVLAKALE QIRNQLTAMSSVLAKALEVIKPAHILQEKE R N Q A K A 2 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 1 0 0 1 0 0 12 0 1261.67 Q14152 Q14152 521 532 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.8721E-17 231.07 By MS/MS By matching 3.17 0.687 1 3 2 5 1 16440000 16332000 108210 10858 1409 11348;11349 26946;26947;26948;26949;26950;26951 19069;19070;19071;19072 19069 1091 4 442570 155090 NQLTSLPSAICK CIDQWVHVETLNLSRNQLTSLPSAICKLSK LSRNQLTSLPSAICKLSKLKKLYLNSNKLD R N Q C K L 1 0 1 0 1 1 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1330.6915 Q13045 Q13045 279 290 FLII Protein flightless-1 homolog yes yes 2 2.2281E-08 194.94 By MS/MS 3 0 1 1 697990 697990 0 10859 1328 11350 26952 19073 19073 1 18221 0 NQLTSNPENTVFDAK AFTPEGERLIGDAAKNQLTSNPENTVFDAK NQLTSNPENTVFDAKRLIGRTWNDPSVQQD K N Q A K R 1 0 3 1 0 1 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 0 15 0 1676.8006 P11021 P11021 82 96 HSPA5 78 kDa glucose-regulated protein yes yes 2 9.3011E-64 306.44 By MS/MS By MS/MS 7.14 1.81 2 1 1 1 1 1 6 1 38752000 38604000 147530 10860 545 11351 26953;26954;26955;26956;26957;26958;26959 19074;19075;19076 19075 3 1894600 436530 NQLTSNPENTVFDAKR AFTPEGERLIGDAAKNQLTSNPENTVFDAK QLTSNPENTVFDAKRLIGRTWNDPSVQQDI K N Q K R L 1 1 3 1 0 1 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 0 16 1 1832.9017 P11021 P11021 82 97 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 3.8377E-20 246.25 By MS/MS 6.33 2.21 1 1 2 1 1 1 1 1 9 55175000 55175000 0 10861 545 11352 26960;26961;26962;26963;26964;26965;26966;26967;26968 19077;19078 19078 2 2491000 0 NQNDPLPGR FEGTVTKVIPKVPSKNQNDPLPGRIKVDFV PKVPSKNQNDPLPGRIKVDFVIPKELPFGD K N Q G R I 0 1 2 1 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 0 1009.4941 O75534 O75534 278 286 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.0027128 122.13 By MS/MS 4.5 0.5 1 1 2 4782000 4782000 0 10862 316 11353 26969;26970 19079;19080 19080 2 184340 0 NQNEALLQAIK QRDVRKANLKEKKERNQNEALLQAIKARNI KKERNQNEALLQAIKARNIRLSEAACEDED R N Q I K A 2 0 2 0 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1240.6776 O95801 O95801 217 227 TTC4 Tetratricopeptide repeat protein 4 yes yes 2 1.2996E-05 174.98 By MS/MS 6.5 0.5 1 1 2 6941200 6941200 0 10863 407 11354 26971;26972 19081 19081 1 94448 0 NQNIQKPEYSE TKWLLRLEEYTEKKKNQNIQKPEYSE____ EKKKNQNIQKPEYSE_______________ K N Q S E - 0 0 2 0 0 2 2 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 11 1 1348.6259 Q9BQP7 Q9BQP7 334 344 MGME1 Mitochondrial genome maintenance exonuclease 1 yes yes 2 0.00017363 173.39 By MS/MS 8 0 1 1 743890 743890 0 10864 2318 11355 26973 19082 19082 1 49074 0 NQQFHKER QLDDEEGLPEKLVIKNQQFHKEREQPPRFA PEKLVIKNQQFHKEREQPPRFAQPGSFEYE K N Q E R E 0 1 1 0 0 2 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 8 1 1085.5366 Q15233 Q15233 244 251 NONO Non-POU domain-containing octamer-binding protein yes yes 2 0.036887 151.04 By MS/MS 6 0 1 1 649960 649960 0 10865 1487 11356 26974 19083 19083 1 5068.4 0 NQQTIGAR YFTEAGLKELSEYVRNQQTIGARKELQKEL ELSEYVRNQQTIGARKELQKELQEQMSRGD R N Q A R K 1 1 1 0 0 2 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 8 0 886.46208 Q7L1Q6 Q7L1Q6 247 254 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.013245 115.49 By MS/MS 7.5 0.5 1 1 2 5260700 5260700 0 10866 1762 11357 26975;26976 19084 19084 1 98428 0 NQSFCPTVNLDK GYFGKVGMKHYHLKRNQSFCPTVNLDKLWT LKRNQSFCPTVNLDKLWTLVSEQTRVNAAK R N Q D K L 0 0 2 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 0 1421.6609 P46776 P46776 66 77 RPL27A 60S ribosomal protein L27a yes yes 2 0.0018515 123.62 By MS/MS 9.5 0.5 1 1 2 829510 829510 0 10867 884 11358 26977;26978 19085 19085 1 613440 0 NQTAEKEEFEHQQK KILDKCNEIINWLDKNQTAEKEEFEHQQKE KNQTAEKEEFEHQQKELEKVCNPIITKLYQ K N Q Q K E 1 0 1 0 0 3 4 0 1 0 0 2 0 1 0 0 1 0 0 0 0 0 14 1 1744.8016 P11142 P11142 584 597 HSPA8 Heat shock cognate 71 kDa protein yes yes 3 0.0057153 90.689 By MS/MS By matching 6.2 1.17 2 1 1 1 4 1 7308000 7286900 21103 10868 546 11359 26979;26980;26981;26982;26983 19086 19086 1 280470 62443 NQTQVLR NQTYLVSERLEREERNQTQVLRQQQDEAYL ERLEREERNQTQVLRQQQDEAYLASLRADQ R N Q L R Q 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 857.47191 Q96CS3 Q96CS3 284 290 FAF2 FAS-associated factor 2 yes yes 2 0.0079076 162.31 By MS/MS By matching 6.33 0.471 2 1 2 1 30032000 29948000 84021 10869 2140 11360 26984;26985;26986 19087 19087 1 267540 257690 NQVALNPQNTVFDAK VAFTDTERLIGDAAKNQVALNPQNTVFDAK NQVALNPQNTVFDAKRLIGRKFGDPVVQSD K N Q A K R 2 0 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 15 0 1657.8424 P0DMV9;P0DMV8 P0DMV9 57 71 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 1.0352E-28 269.93 By MS/MS By matching 7.14 1.81 2 1 1 1 1 1 6 1 56839000 56705000 133040 10870 528 11361 26987;26988;26989;26990;26991;26992;26993 19088;19089;19090;19091 19089 4 3045700 393670 NQVALNPQNTVFDAKR VAFTDTERLIGDAAKNQVALNPQNTVFDAK QVALNPQNTVFDAKRLIGRKFGDPVVQSDM K N Q K R L 2 1 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 16 1 1813.9435 P0DMV9;P0DMV8 P0DMV9 57 72 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 7.0763E-07 177.36 By MS/MS By matching 5 0 3 2 1 28957000 28908000 49219 10871 528 11362 26994;26995;26996 19092;19093 19093 2 1188200 145640 NQVAMNPTNTVFDAK VAFTDTERLIGDAAKNQVAMNPTNTVFDAK NQVAMNPTNTVFDAKRLIGRRFDDAVVQSD K N Q A K R 2 0 3 1 0 1 0 0 0 0 0 1 1 1 1 0 2 0 0 2 0 0 15 0 1648.7879 P11142 P11142 57 71 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 4.2372E-92 331.92 By MS/MS By MS/MS 6.67 1.83 4 1 1 1 1 1 7 2 28996000 28766000 229530 10872 546 11363;11364 26997;26998;26999;27000;27001;27002;27003;27004;27005 19094;19095;19096;19097;19098;19099;19100 19095 338 7 1579300 679180 NQVEDLLATLEK WMHTDPVSQKNESVRNQVEDLLATLEKSGA SVRNQVEDLLATLEKSGAGVPAVILRRPNQ R N Q E K S 1 0 1 1 0 1 2 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 12 0 1371.7246 Q92542 Q92542 392 403 NCSTN Nicastrin yes yes 2 2.0107E-06 176.48 By MS/MS 4 0.816 1 1 1 3 1779700 1779700 0 10873 2056 11365 27006;27007;27008 19101;19102 19101 2 49087 0 NQVTATKADGGTQVIDTK NKVVHVNGYGKITGKNQVTATKADGGTQVI TATKADGGTQVIDTKNILIATGSEVTPFPG K N Q T K N 2 0 1 2 0 2 0 2 0 1 0 2 0 0 0 0 4 0 0 2 0 0 18 1 1845.9432 P09622 P09622 160 177 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 3 0.010063 73.688 By MS/MS 6 0 1 1 2597700 2597700 0 10874 518 11366 27009 19103 19103 1 20257 0 NQWQLSADDLKK PKTAWRLDCAQLKEKNQWQLSADDLKKLKP KEKNQWQLSADDLKKLKPGLEKDFLPLYFG K N Q K K L 1 0 1 2 0 2 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 12 1 1444.731 P09543 P09543 165 176 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.011808 86.772 By MS/MS 7 0.816 1 1 1 3 5772500 5772500 0 10875 516 11367 27010;27011;27012 19104 19104 1 98925 0 NQYDNDVTVWSPQGR ______________________________ NQYDNDVTVWSPQGRIHQIEYAMEAVKQGS R N Q G R I 0 1 2 2 0 2 0 1 0 0 0 0 0 0 1 1 1 1 1 2 0 0 15 0 1777.802 P25786 P25786 4 18 PSMA1 Proteasome subunit alpha type-1 yes yes 2 1.195E-07 208.28 By MS/MS 8 0 1 1 5101500 5101500 0 10876 688 11368 27013 19105 19105 1 336540 0 NRDHDTFLAVR DGRWTELAGCTADFRNRDHDTFLAVRYSRG ADFRNRDHDTFLAVRYSRGRLTVMTDLEDK R N R V R Y 1 2 1 2 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 11 1 1342.6742 Q12907 Q12907 208 218 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 3 0.041511 65.842 By MS/MS 8 0 1 1 681930 681930 0 10877 1315 11369 27014 19106 19106 1 44987 0 NRDNDPNDYVEQDDILIVK DLISNSPRVIPVTSRNRDNDPNDYVEQDDI DPNDYVEQDDILIVKLRKGQELRLRAYAKK R N R V K L 0 1 3 5 0 1 1 0 0 2 1 1 0 0 1 0 0 0 1 2 0 0 19 1 2274.0764 P19387 P19387 134 152 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 3 0.00080852 103.9 By MS/MS 8 0 1 1 578160 578160 0 10878 631 11370 27015 19107 19107 1 38141 0 NREELGFRPEYSASQLK LGMIDRWYHPGCFVKNREELGFRPEYSASQ EELGFRPEYSASQLKGFSLLATEDKEALKK K N R L K G 1 2 1 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 17 2 2023.0123 P09874 P09874 166 182 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3;4 0.0061664 81.594 By MS/MS 4 0.707 1 2 1 4 10799000 10799000 0 10879 521 11371 27016;27017;27018;27019 19108;19109 19109 2 303700 0 NREPVQLETLSIR VSMNTHLKAVKMTLKNREPVQLETLSIRGN LKNREPVQLETLSIRGNNIRYFILPDSLPL K N R I R G 0 2 1 0 0 1 2 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 13 1 1553.8526 P62314 P62314 49 61 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 2;3 7.6466E-07 186.76 By MS/MS 10 0 2 2 1163600 1163600 0 10880 1129 11372 27020;27021 19110;19111 19110 2 1236800 0 NRESEAFVQR LEASGTLLLLAPATRNRESEAFVQRLLWLR APATRNRESEAFVQRLLWLRGRGRLRYVNL R N R Q R L 1 2 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 10 1 1234.6054 Q9BSF4 Q9BSF4 103 112 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.0074721 122.33 By MS/MS 8.5 0.5 1 1 2 3257300 3257300 0 10881 2336 11373 27022;27023 19112 19112 1 288280 0 NRIDYVSSAVR EDIARADNIFTATERNRIDYVSSAVRIDHA ATERNRIDYVSSAVRIDHAPDLPRPEVCFI R N R V R I 1 2 1 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 11 1 1278.668 Q8N3Z3 Q8N3Z3 91 101 GTPBP8 GTP-binding protein 8 yes yes 2 0.0020048 152.04 By MS/MS 8.5 0.5 1 1 2 5935800 5935800 0 10882 1912 11374 27024;27025 19113 19113 1 563540 0 NRLEEVSPNLVR IAGMTLPYDTLDQVRNRLEEVSPNLVRYDD QVRNRLEEVSPNLVRYDDIEGANYFQQANE R N R V R Y 0 2 2 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 12 1 1424.7736 P28331 P28331 644 655 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2;3 0.012008 126.19 By MS/MS 5 0 2 2 1086700 1086700 0 10883 718 11375 27026;27027 19114;19115 19114 2 44667 0 NRLENDGATALAEAFR AQGKPLALKVFVAGRNRLENDGATALAEAF RLENDGATALAEAFRVIGTLEEVHMPQNGI R N R F R V 4 2 2 1 0 0 2 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 16 1 1746.8649 P46060 P46060 190 205 RANGAP1 Ran GTPase-activating protein 1 yes yes 3 0.028912 62.438 By MS/MS 5 0 1 1 316190 316190 0 10884 876 11376 27028 19116 19116 1 12997 0 NRPEDYQGGR GVQGFPTIKIFGSNKNRPEDYQGGRTGEAI FGSNKNRPEDYQGGRTGEAIVDAALSALRQ K N R G R T 0 2 1 1 0 1 1 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 10 1 1190.5428 Q15084 Q15084 109 118 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.0065128 128.35 By MS/MS By matching 6.75 0.829 2 1 1 3 1 4024100 4005400 18695 10885 1478 11377 27029;27030;27031;27032 19117 19117 1 35519 57336 NRQEYEDIAVK ASQLTCLGCLELIAKNRQEYEDIAVKLGTD LIAKNRQEYEDIAVKLGTDLEYLKKVRGKV K N R V K L 1 1 1 1 0 1 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 11 1 1363.6732 O15294 O15294 972 982 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.028547 121.36 By MS/MS 4 0 1 1 594060 594060 0 10886 167 11378 27033 19118 19118 1 16217 0 NRVQNMALYADVGGK STETVFIVEISLTCKNRVQNMALYADVGGK NRVQNMALYADVGGKQFPVTRGQDVGRYQV K N R G K Q 2 1 2 1 0 1 0 2 0 0 1 1 1 0 0 0 0 0 1 2 0 0 15 1 1634.8199 P51571 P51571 59 73 SSR4 Translocon-associated protein subunit delta yes yes 3 0.013046 76.358 By MS/MS 9.5 0.5 1 1 2 732680 732680 0 10887 968 11379 27034;27035 19119 19119 730 1 705440 0 NSAASGLFIQAIQSR SHEPPVQDFISAVHRNSAASGLFIQAIQSR NSAASGLFIQAIQSRCENLSTPTMLKKTLQ R N S S R C 3 1 1 0 0 2 0 1 0 2 1 0 0 1 0 3 0 0 0 0 0 0 15 0 1561.8213 P42858 P42858 1946 1960 HTT Huntingtin yes yes 2 0.0017527 116.19 By MS/MS 1.5 0.5 1 1 2 133070 133070 0 10888 858 11380 27036;27037 19120 19120 1 6570.7 0 NSALSAQLR TSLGLSEQKARETLKNSALSAQLREAATQA ARETLKNSALSAQLREAATQAQQTLGSTID K N S L R E 2 1 1 0 0 1 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 958.51959 P47897 P47897 26 34 QARS Glutamine--tRNA ligase yes yes 2 0.0023835 143.37 By MS/MS 5 0 1 1 1567300 1567300 0 10889 896 11381 27038 19121 19121 1 64423 0 NSDLLTSPDVGLLK LADPVGSLKPHLRAKNSDLLTSPDVGLLKL KNSDLLTSPDVGLLKLASPELERLIIQSSN K N S L K L 0 0 1 2 0 0 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 14 0 1470.793 P05412 P05412 57 70 JUN Transcription factor AP-1 yes yes 2 3.5057E-05 156.36 By MS/MS 7 0 1 1 366920 366920 0 10890 474 11382 27039 19122 19122 1 6557 0 NSEPAGLETPEAK GQPPLSQSSDSSPTRNSEPAGLETPEAKVL TRNSEPAGLETPEAKVLFDKVASQGEVVRK R N S A K V 2 0 1 0 0 0 3 1 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1341.6412 P07814 P07814 890 902 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 8.5854E-08 188.27 By MS/MS By matching 3 0.707 1 2 1 3 1 5155500 5012300 143210 10891 493 11383 27040;27041;27042;27043 19123;19124;19125;19126 19125 4 135310 205250 NSEQETLQK AHLETLSHSFILSLKNSEQETLQKYSHLYD FILSLKNSEQETLQKYSHLYDLSRSEKEKL K N S Q K Y 0 0 1 0 0 2 2 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 9 0 1075.5146 A2RRP1 A2RRP1 1978 1986 NBAS Neuroblastoma-amplified sequence yes yes 2 0.007699 109.83 By MS/MS 1 0 1 1 58790 58790 0 10892 10 11384 27044 19127 19127 1 2872.4 0 NSESGTATTGTSLSAPDITVR VRTWVGNKRRKMSSKNSESGTATTGTSLSA ATTGTSLSAPDITVRNVVNIARPSSQQSSW K N S V R N 2 1 1 1 0 0 1 2 0 1 1 0 0 0 1 4 5 0 0 1 0 0 21 0 2063.9971 Q7Z353 Q7Z353 63 83 HDX Highly divergent homeobox yes yes 2 1.5392E-05 128.71 By MS/MS 4 0 1 1 104080 0 104080 10893 1780 11385 27045 19128 19128 1 0 217480 NSFDCFKK NQRSTGSFVGELMYKNSFDCFKKVLRYEGF VGELMYKNSFDCFKKVLRYEGFFGLYRGLL K N S K K V 0 0 1 1 1 0 0 0 0 0 0 2 0 2 0 1 0 0 0 0 0 0 8 1 1044.4699 Q9UJS0;O75746 Q9UJS0 373 380 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2;3 0.02178 136.27 By MS/MS 5.75 0.829 2 1 1 4 12871000 12871000 0 10894 2798;327 11386 27046;27047;27048;27049 19129;19130 19129 2 509340 0 NSGQNLEEDMGQSEQKADPPATEK LRPSPRLLCTATKQKNSGQNLEEDMGQSEQ MGQSEQKADPPATEKTLLEEKVKLEEQLKE K N S E K T 2 0 2 2 0 3 4 2 0 0 1 2 1 0 2 2 1 0 0 0 0 0 24 1 2602.1453 Q9HAV7 Q9HAV7 35 58 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 3 0.00084441 77.1 By MS/MS 9 0 1 1 326480 326480 0 10895 2547 11387 27050 19131 19131 1 187370 0 NSGSELQVYYASPR LMAVQYTETTSSISRNSGSELQVYYASPRS RNSGSELQVYYASPRSYQDFFEAIRRRGDT R N S P R S 1 1 1 0 0 1 1 1 0 0 1 0 0 0 1 3 0 0 2 1 0 0 14 0 1569.7423 P18850 P18850 537 550 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 1.2158E-05 166.62 By MS/MS By matching 4 2.89 1 1 1 2 1 2 4 1277600 752300 525330 10896 626 11388 27051;27052;27053;27054;27055;27056 19132 19132 1 95628 780480 NSGSQLASLLK KPSGDTPDVFISYRRNSGSQLASLLKVHLQ SYRRNSGSQLASLLKVHLQLHGFSVFIDVE R N S L K V 1 0 1 0 0 1 0 1 0 0 3 1 0 0 0 3 0 0 0 0 0 0 11 0 1116.6139 Q6SZW1 Q6SZW1 571 581 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.00031928 150.09 By MS/MS 5 0 1 1 284810 284810 0 10897 1725 11389 27057 19133 19133 1 11707 0 NSILAQVLDQSAR DAAQQEAKHREAEMRNSILAQVLDQSARAR MRNSILAQVLDQSARARLSNLALVKPEKTK R N S A R A 2 1 1 1 0 2 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1413.7576 O14737 O14737 41 53 PDCD5 Programmed cell death protein 5 yes yes 2 5.3941E-35 264.3 By MS/MS 10 0 1 1 1128900 1128900 0 10898 124 11390 27058 19134 19134 1 1199900 0 NSILFLNSLDAK TAYFPPGATLNNKEKNSILFLNSLDAKEIY KEKNSILFLNSLDAKEIYLEVIHNLPDFEL K N S A K E 1 0 2 1 0 0 0 0 0 1 3 1 0 1 0 2 0 0 0 0 0 0 12 0 1333.7242 Q8IXB1 Q8IXB1 326 337 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 2 3.5012E-33 264.17 By MS/MS 5 0.816 1 1 1 3 904860 904860 0 10899 1870 11391 27059;27060;27061 19135 19135 1 29846 0 NSINQVVQLR KSMESVMVKYDATVRNSINQVVQLRYGEDG DATVRNSINQVVQLRYGEDGLAGESVEFQN R N S L R Y 0 1 2 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1169.6517 P24928 P24928 881 890 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 1.244E-10 204.79 By MS/MS 2 0 1 1 463660 463660 0 10900 681 11392 27062 19136 19136 1 23046 0 NSKIEISELNR EELQITAGRHGDSVRNSKIEISELNRVIQR DSVRNSKIEISELNRVIQRLRSEIDNVKKQ R N S N R V 0 1 2 0 0 0 2 0 0 2 1 1 0 0 0 2 0 0 0 0 0 0 11 1 1301.6939 P04264;CON__P04264 P04264 393 403 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 1.1922E-21 247.96 By MS/MS By MS/MS 4.72 2.66 2 2 3 3 2 1 1 2 1 1 6 12 7485700 3166300 4319400 + 10901 450;45 11393 27063;27064;27065;27066;27067;27068;27069;27070;27071;27072;27073;27074;27075;27076;27077;27078;27079;27080 19137;19138;19139;19140;19141;19142;19143;19144;19145 19145 9 1042700 7640300 NSLEDLTAEDFR PLHAMRKGLLDVLPKNSLEDLTAEDFRLLV LPKNSLEDLTAEDFRLLVNGCGEVNVQMLI K N S F R L 1 1 1 2 0 0 2 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 12 0 1408.647 O95071 O95071 2665 2676 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 7.2683E-44 280.38 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 5646400 5646400 0 10902 364 11394 27081;27082;27083;27084;27085;27086;27087;27088;27089 19146;19147;19148;19149;19150;19151 19149 6 275830 0 NSLESSGVR RFQEFSNIVIPLIKKNSLESSGVRTTKNEE IPLIKKNSLESSGVRTTKNEEENEKEKELQ K N S V R T 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 3 0 0 0 1 0 0 9 0 947.46722 Q5VYK3 Q5VYK3 1665 1673 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0011327 157.34 By MS/MS 2.5 0.5 1 1 2 1996900 1996900 0 10903 1657 11395 27090;27091 19152 19152 1 59597 0 NSLESYAFNMK YKAEDEKQRDKVSSKNSLESYAFNMKATVE VSSKNSLESYAFNMKATVEDEKLQGKINDE K N S M K A 1 0 2 0 0 0 1 0 0 0 1 1 1 1 0 2 0 0 1 0 0 0 11 0 1302.5914 P11142 P11142 540 550 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 8.0037E-39 285.27 By MS/MS By MS/MS 5.67 0.745 3 2 1 5 1 27643000 27528000 114410 10904 546 11396;11397 27092;27093;27094;27095;27096;27097 19153;19154;19155;19156 19155 339 4 1069500 338530 NSLGGDVLFVGK LEEVYPDLTPEETRRNSLGGDVLFVGKHHP TRRNSLGGDVLFVGKHHPLHDFILELYQTG R N S G K H 0 0 1 1 0 0 0 3 0 0 2 1 0 1 0 1 0 0 0 2 0 0 12 0 1204.6452 Q9H0D6 Q9H0D6 677 688 XRN2 5-3 exoribonuclease 2 yes yes 2 0.021405 84.31 By MS/MS 4 0 1 1 703760 703760 0 10905 2453 11398 27098 19157 19157 1 19212 0 NSLLSLSDT YDTLNAWKQNLNKVKNSLLSLSDT______ NLNKVKNSLLSLSDT_______________ K N S D T - 0 0 1 1 0 0 0 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 9 0 948.47639 Q7L2H7 Q7L2H7 366 374 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.0023314 126.24 By MS/MS 7.5 0.5 1 1 2 841320 841320 0 10906 1764 11399 27099;27100 19158 19158 1 18137 0 NSLPDALLPNLLDR DTPRGSWACSIFDLKNSLPDALLPNLLDRT KNSLPDALLPNLLDRTPNEEIDRQNDDQRK K N S D R T 1 1 2 2 0 0 0 0 0 0 5 0 0 0 2 1 0 0 0 0 0 0 14 0 1549.8464 Q96N67 Q96N67 200 213 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.052741 68.44 By MS/MS 3 0.816 1 1 1 3 176920 176920 0 10907 2230 11400 27101;27102;27103 19159 19159 1 7131.9 0 NSLQNLSQYPMMR SAIEMQLRRVLHDIRNSLQNLSQYPMMRGP IRNSLQNLSQYPMMRGPDPAAAPYSTQKSS R N S M R G 0 1 2 0 0 2 0 0 0 0 2 0 2 0 1 2 0 0 1 0 0 0 13 0 1580.7439 P28290 P28290 922 934 SSFA2 Sperm-specific antigen 2 yes yes 2 0.036683 53.751 By MS/MS 8.5 0.5 1 1 2 194590 194590 0 10908 717 11401 27104;27105 19160 19160 494;495 1 57068 0 NSLTSKDPDIK GNSQVARVAAGLQIKNSLTSKDPDIKAQYQ LQIKNSLTSKDPDIKAQYQQRWLAIDANAR K N S I K A 0 0 1 2 0 0 0 0 0 1 1 2 0 0 1 2 1 0 0 0 0 0 11 1 1216.6299 Q14974 Q14974 63 73 KPNB1 Importin subunit beta-1 yes yes 2 0.011963 139.15 By MS/MS 4.5 0.5 1 1 2 2659500 2659500 0 10909 1452 11402 27106;27107 19161 19161 1 76617 0 NSNILEDLETLR YQPMEKLYMVLITTKNSNILEDLETLRLFS TTKNSNILEDLETLRLFSRVIPEYCRALEE K N S L R L 0 1 2 1 0 0 2 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 12 0 1415.7256 P48444 P48444 73 84 ARCN1 Coatomer subunit delta yes yes 2 9.7899E-34 268.98 By MS/MS 6.5 1.12 1 1 1 1 4 28723000 28723000 0 10910 903 11403 27108;27109;27110;27111 19162;19163;19164;19165 19163 4 233580 0 NSNPALNDNLEK TAGLDIFAKFSAYIKNSNPALNDNLEKGLL YIKNSNPALNDNLEKGLLKALKVLDNYLTS K N S E K G 1 0 4 1 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 12 0 1327.6368 O00299 O00299 120 131 CLIC1 Chloride intracellular channel protein 1 yes yes 2 0.003692 112.64 By MS/MS 8.5 0.5 1 1 2 849790 849790 0 10911 87 11404 27112;27113 19166 19166 1 131540 0 NSNVDSSYLESLYQSCPR SGTWIQYGEEKDKRKNSNVDSSYLESLYQS VDSSYLESLYQSCPRGVVPFQAGSRNYELS K N S P R G 0 1 2 1 1 1 1 0 0 0 2 0 0 0 1 5 0 0 2 1 0 0 18 0 2117.9324 Q7Z2W4 Q7Z2W4 630 647 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 1.4038E-33 213.52 By MS/MS 4.5 0.5 1 1 2 1521000 1521000 0 10912 1777 11405 27114;27115 19167 19167 0 44490 0 NSNYESIQQTAR NMPDYMILQELKKLKNSNYESIQQTARSIA KLKNSNYESIQQTARSIAEQAHELAYDPNY K N S A R S 1 1 2 0 0 2 1 0 0 1 0 0 0 0 0 2 1 0 1 0 0 0 12 0 1409.6535 Q8NI37 Q8NI37 243 254 PPTC7 Protein phosphatase PTC7 homolog yes yes 2 3.3303E-05 169.65 By MS/MS 8 0 1 1 350720 350720 0 10913 1977 11406 27116 19168 19168 1 23137 0 NSPGSQVASNPR FTPSGILTPHALGSRNSPGSQVASNPRQAA GSRNSPGSQVASNPRQAAYEMRMQNNSSPS R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 0.00043306 141.71 By MS/MS 4 0 1 1 390330 390330 0 10914 2453 11407 27117 19169 19169 1 10656 0 NSPVGVNHR GTIGGGIFQAIKGFRNSPVGVNHRLRGSLT AIKGFRNSPVGVNHRLRGSLTAIKTRAPQL R N S H R L 0 1 2 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 2 0 0 9 0 978.49953 Q99595 Q99595 39 47 TIMM17A Mitochondrial import inner membrane translocase subunit Tim17-A yes yes 2 0.0026948 122.33 By MS/MS 9.5 0.5 1 1 2 1136500 1136500 0 10915 2274 11408 27118;27119 19170 19170 1 1196600 0 NSQFAGGPLGNPNTTAK SVLQELKGLQEFLDRNSQFAGGPLGNPNTT QFAGGPLGNPNTTAKVQQRLIGFMRPENGN R N S A K V 2 0 3 0 0 1 0 3 0 0 1 1 0 1 2 1 2 0 0 0 0 0 17 0 1672.8169 O75694 O75694 724 740 NUP155 Nuclear pore complex protein Nup155 yes yes 2 2.4079E-18 199.38 By MS/MS 3 0 1 1 538330 538330 0 10916 324 11409 27120 19171 19171 1 14053 0 NSQSFFSGLFGGSSK AEAMALLAEAERKVKNSQSFFSGLFGGSSK NSQSFFSGLFGGSSKIEEACEIYARAANMF K N S S K I 0 0 1 0 0 1 0 3 0 0 1 1 0 3 0 5 0 0 0 0 0 0 15 0 1548.7209 P54920 P54920 23 37 NAPA Alpha-soluble NSF attachment protein yes yes 2 1.7708E-05 140.33 By MS/MS 8 0 1 1 124110 124110 0 10917 1020 11410 27121 19172 19172 1 8187.8 0 NSQSGNALTAYALFK LELIGLPDSVVSILKNSQSGNALTAYALFK NSQSGNALTAYALFKIATPARYTVTLGGTS K N S F K I 3 0 2 0 0 1 0 1 0 0 2 1 0 1 0 2 1 0 1 0 0 0 15 0 1583.7944 Q96ND0 Q96ND0 181 195 FAM210A Protein FAM210A yes yes 2 1.3464E-07 193.11 By MS/MS 9.5 0.5 1 1 2 1282300 1282300 0 10918 2232 11411 27122;27123 19173 19173 1 747160 0 NSQTNKTEEVKEENLK PKPKQASAASYFQKRNSQTNKTEEVKEENL SQTNKTEEVKEENLKNVLSETPAICPPQNT R N S L K N 0 0 3 0 0 1 4 0 0 0 1 3 0 0 0 1 2 0 0 1 0 0 16 2 1889.933 O75717 O75717 983 998 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 3 0.0053638 93.106 By MS/MS 3 0 1 1 512710 512710 0 10919 325 11412 27124 19174 19174 1 13384 0 NSSIVGR EISTGERKGSWSERRNSSIVGRRSLERTTS KGSWSERRNSSIVGRRSLERTTSGDDACNL R N S G R R 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 0 1 0 0 7 0 731.3926 Q96N67 Q96N67 438 444 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.044771 104.75 By MS/MS 2 0 1 1 648620 648620 0 10920 2230 11413 27125 19175 19175 1 32240 0 NSSNFKK EEFSDSEEEGEGGRKNSSNFKKAKRVKTED EEGEGGRKNSSNFKKAKRVKTEDEKEKDPE K N S K K A 0 0 2 0 0 0 0 0 0 0 0 2 0 1 0 2 0 0 0 0 0 0 7 1 823.41882 Q13547 Q13547 433 439 HDAC1 Histone deacetylase 1 yes yes 2 0.030607 162.31 By MS/MS 6 0 1 1 448190 448190 0 10921 1380 11414 27126 19176 19176 1 3495 0 NSSNTSVGSPSNTIGR TFQDGATKLLHNHLKNSSNTSVGSPSNTIG SSNTSVGSPSNTIGRTPSRHTSSRTSPLTS K N S G R T 0 1 3 0 0 0 0 2 0 1 0 0 0 0 1 5 2 0 0 1 0 0 16 0 1576.7441 Q7Z460 Q7Z460 1083 1098 CLASP1 CLIP-associating protein 1 yes yes 2 0.0038399 136.01 By MS/MS 3 0 1 1 368070 368070 0 10922 1790 11415 27127 19177 19177 1 9608.5 0 NSSQAVQAVR HHTPFMHIGMAHNYRNSSQAVQAVRDAGYE AHNYRNSSQAVQAVRDAGYEISLGLMPKSI R N S V R D 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 10 0 1058.5469 Q9UDR5 Q9UDR5 190 199 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 1.5445E-21 242.39 By MS/MS 4 0 1 1 2025800 2025800 0 10923 2762 11416 27128 19178 19178 1 55301 0 NSSQFFQSYVER YKKKYSDADIEPFLKNSSQFFQSYVERGLR FLKNSSQFFQSYVERGLRVIEMEREGKGRI K N S E R G 0 1 1 0 0 2 1 0 0 0 0 0 0 2 0 3 0 0 1 1 0 0 12 0 1490.679 Q14008 Q14008 1871 1882 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00041065 142.76 By MS/MS 2.5 1.12 1 1 1 1 4 1297200 1297200 0 10924 1405 11417 27129;27130;27131;27132 19179 19179 1 53873 0 NSSSGISGSQR PSDRLREFLHRGEKKNSSSGISGSQRRYIG GEKKNSSSGISGSQRRYIGVMMLTLSPSIL K N S Q R R 0 1 1 0 0 1 0 2 0 1 0 0 0 0 0 5 0 0 0 0 0 0 11 0 1078.5003 O43464 O43464 349 359 HTRA2 Serine protease HTRA2, mitochondrial yes yes 2 0.00025535 152.69 By MS/MS 8 0 1 1 298460 298460 0 10925 202 11418 27133 19180 19180 1 19690 0 NSSVAAAQLVR HVRRECPEVKLARQRNSSVAAAQLVRNLVN ARQRNSSVAAAQLVRNLVNAQQVAGSAQQQ R N S V R N 3 1 1 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1114.6095 Q5TAX3 Q5TAX3 1382 1392 ZCCHC11 Terminal uridylyltransferase 4 yes yes 2 0.00093157 134.57 By MS/MS 2 0 1 1 284660 284660 0 10926 1636 11419 27134 19181 19181 1 14149 0 NSSYFVEWIPNNVK SMKEVDEQMLNVQNKNSSYFVEWIPNNVKT KNSSYFVEWIPNNVKTAVCDIPPRGLKMSA K N S V K T 0 0 3 0 0 0 1 0 0 1 0 1 0 1 1 2 0 1 1 2 0 0 14 0 1695.8257 P07437;P68371;Q13885;Q9BVA1;P04350;Q13509;Q9BUF5 P68371 337 350 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-6 chain no no 2;3 6.4937E-12 237.67 By MS/MS 5.91 1.5 1 1 1 5 2 1 11 535010000 535010000 0 10927 1187;490;1400;2375;451;1377;2363 11420 27135;27136;27137;27138;27139;27140;27141;27142;27143;27144;27145 19182;19183;19184;19185;19186;19187;19188;19189;19190;19191 19184 10 4481700 0 NSTECTLILTEGDSAK KGIPKLDDANDAGGRNSTECTLILTEGDSA STECTLILTEGDSAKTLAVSGLGVVGRDKY R N S A K T 1 0 1 1 1 0 2 1 0 1 2 1 0 0 0 2 3 0 0 0 0 0 16 0 1737.8091 P11388 P11388 451 466 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.8198E-14 196.33 By MS/MS 2.5 0.5 1 1 2 991660 991660 0 10928 553 11421 27146;27147 19192 19192 1 27459 0 NSVAGSNPAKPGLGSPGR QLPDLSGPHSYSPGRNSVAGSNPAKPGLGS AGSNPAKPGLGSPGRYSPVHGSQLRRMARL R N S G R Y 2 1 2 0 0 0 0 4 0 0 1 1 0 0 3 3 0 0 0 1 0 0 18 1 1664.8594 Q86XL3 Q86XL3 900 917 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.012221 70.335 By MS/MS 4 0 1 1 700990 700990 0 10929 1841 11422 27148 19193 19193 1 19136 0 NSVFQQGMK VVVQWADLVICKTRRNSVFQQGMKNKILIF ICKTRRNSVFQQGMKNKILIFGLFEETALA R N S M K N 0 0 1 0 0 2 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 9 0 1037.4964 P05023;P50993;P13637 P05023 942 950 ATP1A1;ATP1A2;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 5.1647E-05 172.21 By MS/MS 2.5 1.12 1 1 1 1 4 1388300 1388300 0 10930 463;575 11423 27149;27150;27151;27152 19194;19195 19195 253 2 48214 0 NSVTGGTAAFEPSVDYCVVK VAAKLALGIPLPELRNSVTGGTAAFEPSVD GTAAFEPSVDYCVVKIPRWDLSKFLRVSTK R N S V K I 2 0 1 1 1 0 1 2 0 0 0 1 0 1 1 2 2 0 1 4 0 0 20 0 2099.9834 P27708 P27708 720 739 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.0694E-39 236.12 By MS/MS 2 0.816 1 1 1 3 1666900 1666900 0 10931 709 11424 27153;27154;27155 19196;19197;19198 19197 3 73580 0 NSYLEVLLK VAVLPHILDTGAAGRNSYLEVLLKLADKYK TGAAGRNSYLEVLLKLADKYKKKMWGWLWT R N S L K L 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 1 1 0 0 9 0 1077.607 Q15084 Q15084 314 322 PDIA6 Protein disulfide-isomerase A6 yes yes 2 2.0867E-08 209.21 By MS/MS 6.5 0.5 1 1 2 4684300 4684300 0 10932 1478 11425 27156;27157 19199;19200 19199 2 37661 0 NTAELQPESGKR GCDNMTCIIICFKPRNTAELQPESGKRKLE KPRNTAELQPESGKRKLEEVLSTEGAEENG R N T K R K 1 1 1 0 0 1 2 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 1 1328.6684 O15355 O15355 509 520 PPM1G Protein phosphatase 1G yes yes 2 0.00028382 160.91 By MS/MS 5 0 1 1 551460 551460 0 10933 170 11426 27158 19201 19201 1 22667 0 NTALTLACFQGR LDMGSDINAQIETNRNTALTLACFQGRAEV TNRNTALTLACFQGRAEVVSLLLDRKANVE R N T G R A 2 1 1 0 1 1 0 1 0 0 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1350.6714 O75179;Q8IWZ3 Q8IWZ3 1225 1236 ANKRD17;ANKHD1 Ankyrin repeat domain-containing protein 17;Ankyrin repeat and KH domain-containing protein 1 no no 2 0.00038486 143.97 By MS/MS 2 0.816 1 1 1 3 784860 784860 0 10934 290;1868 11427 27159;27160;27161 19202 19202 1 31100 0 NTCTSVYTK EKMGQKIAPYSVEIKNTCTSVYTKDRAAKC YSVEIKNTCTSVYTKDRAAKCKIPALDLLI K N T T K D 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 3 0 1 1 0 0 9 0 1072.4859 P78527 P78527 109 117 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.010176 104.42 By MS/MS 2.5 1.12 1 1 1 1 4 5068100 5068100 0 10935 1197 11428 27162;27163;27164;27165 19203;19204 19203 2 230430 0 NTDDDRPPRR RFSRRGADDDRPSWRNTDDDRPPRRIADED RPSWRNTDDDRPPRRIADEDRGNWRHADDD R N T R R I 0 3 1 3 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 10 2 1240.5909 Q14152 Q14152 991 1000 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0029977 132.88 By MS/MS 2.5 1.12 1 1 1 1 4 2823700 2823700 0 10936 1409 11429 27166;27167;27168;27169 19205 19205 1 79651 0 NTDQASMPDNTAAQK SGVLQLGNIVFKKERNTDQASMPDNTAAQK NTDQASMPDNTAAQKVSHLLGINVTDFTRG R N T Q K V 3 0 2 2 0 2 0 0 0 0 0 1 1 0 1 1 2 0 0 0 0 0 15 0 1590.6944 P35579 P35579 359 373 MYH9 Myosin-9 no no 2 5.1809E-63 297.18 By MS/MS 2 0 2 2 529190 529190 0 10937 793 11430;11431 27170;27171 19206;19207 19207 541 2 26304 0 NTDQASMPENTVAQK SSVLQFGNISFKKERNTDQASMPENTVAQK NTDQASMPENTVAQKLCHLLGMNVMEFTRA R N T Q K L 2 0 2 1 0 2 1 0 0 0 0 1 1 0 1 1 2 0 0 1 0 0 15 0 1632.7413 P35580 P35580 366 380 MYH10 Myosin-10 yes yes 2 0.0005795 153.74 By MS/MS 2 0 1 1 113490 113490 0 10938 794 11432 27172 19208 19208 1 5640.8 0 NTDQGVYLGLSK ______________________________ GSKNTDQGVYLGLSKTQVLSPATAGSSSSD K N T S K T 0 0 1 1 0 1 0 2 0 0 2 1 0 0 0 1 1 0 1 1 0 0 12 0 1293.6565 Q13190 Q13190 11 22 STX5 Syntaxin-5 yes yes 2 8.568E-24 263.29 By MS/MS 7 0 1 1 2797900 2797900 0 10939 1346 11433 27173 19209 19209 1 49999 0 NTDSDVNLVVPLEVIK RDYLFAVNIKLNQLRNTDSDVNLVVPLEVI TDSDVNLVVPLEVIKGDHEFTDYMIRSNES R N T I K G 0 0 2 2 0 0 1 0 0 1 2 1 0 0 1 1 1 0 0 4 0 0 16 0 1753.9462 Q8N1G2 Q8N1G2 472 487 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes yes 2 0.0038272 109.15 By MS/MS 4 0 1 1 170850 170850 0 10940 1900 11434 27174 19210 19210 1 4664 0 NTEAIGNEVTR SISPYLAVQLPARFKNTEAIGNEVTRLVRL ARFKNTEAIGNEVTRLVRLDPGAVSDVPEA K N T T R L 1 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 11 0 1202.5891 P42356 P42356 1564 1574 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.031885 81.525 By MS/MS 2 0 1 1 133970 133970 0 10941 850 11435 27175 19211 19211 1 6659.2 0 NTEAVDLITR GIVRYTKEVYVPHPRNTEAVDLITRLPKGA VPHPRNTEAVDLITRLPKGAVLYKTFVHVV R N T T R L 1 1 1 1 0 0 1 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 10 0 1130.5932 Q9P0M9 Q9P0M9 110 119 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2 1.4799E-10 202.96 By MS/MS By matching 10 0 2 1 1 1810400 1770400 40068 10942 2729 11436 27176;27177 19212 19212 1 1881700 1027700 NTEAVDLITRLPK GIVRYTKEVYVPHPRNTEAVDLITRLPKGA PRNTEAVDLITRLPKGAVLYKTFVHVVPAK R N T P K G 1 1 1 1 0 0 1 0 0 1 2 1 0 0 1 0 2 0 0 1 0 0 13 1 1468.8249 Q9P0M9 Q9P0M9 110 122 MRPL27 39S ribosomal protein L27, mitochondrial yes yes 2;3 1.7801E-24 241.39 By MS/MS 10 0 2 2 945670 945670 0 10943 2729 11437 27178;27179 19213;19214 19213 2 1005100 0 NTEIGFLQDALSK TRFGMKIIDISDVFRNTEIGFLQDALSKPH FRNTEIGFLQDALSKPHGTVKAICIPEGAK R N T S K P 1 0 1 1 0 1 1 1 0 1 2 1 0 1 0 1 1 0 0 0 0 0 13 0 1434.7355 Q6PI48 Q6PI48 350 362 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 1.4378E-34 253.42 By MS/MS 5 0 1 1 260740 260740 0 10944 1715 11438 27180 19215 19215 1 10718 0 NTEIGFLQDALSKPHGTVK TRFGMKIIDISDVFRNTEIGFLQDALSKPH GFLQDALSKPHGTVKAICIPEGAKYLKRKD R N T V K A 1 0 1 1 0 1 1 2 1 1 2 2 0 1 1 1 2 0 0 1 0 0 19 1 2054.0797 Q6PI48 Q6PI48 350 368 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 3 0.018668 61.648 By MS/MS 5.5 0.5 1 1 2 2847100 2847100 0 10945 1715 11439 27181;27182 19216 19216 1 37409 0 NTEYFNQLK GELIHVFNKHDGALRNTEYFNQLKDNSNII HDGALRNTEYFNQLKDNSNIILLGDSQGDL R N T L K D 0 0 2 0 0 1 1 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1155.556 Q9H0P0 Q9H0P0 259 267 NT5C3A Cytosolic 5-nucleotidase 3A yes yes 2 0.00027426 159.28 By MS/MS 7 0 1 1 1274100 1274100 0 10946 2455 11440 27183 19217 19217 1 22768 0 NTFAEQPSTVGYAR VNPFEVVKVGLQANRNTFAEQPSTVGYARQ RNTFAEQPSTVGYARQIIKKEGWGLQGLNK R N T A R Q 2 1 1 0 0 1 1 1 0 0 0 0 0 1 1 1 2 0 1 1 0 0 14 0 1539.7318 Q9BQT8 Q9BQT8 142 155 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 6.3265E-13 212.68 By MS/MS 8 0 1 1 5919100 5919100 0 10947 2319 11441 27184 19218 19218 1 390480 0 NTFLWTEFTDR EPQPMGVRVICGHCKNTFLWTEFTDRTLAR GHCKNTFLWTEFTDRTLARCPHCRKVSSIG K N T D R T 0 1 1 1 0 0 1 0 0 0 1 0 0 2 0 0 3 1 0 0 0 0 11 0 1428.6674 Q86T03 Q86T03 179 189 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 2 0.0015094 147.62 By MS/MS 8 0 1 1 136930 136930 0 10948 1814 11442 27185 19219 19219 1 9033.1 0 NTFQGIYSDQK MDEYLKKMGRDQIFKNTFQGIYSDQKICKD QIFKNTFQGIYSDQKICKDCPHRYEREEAF K N T Q K I 0 0 1 1 0 2 0 1 0 1 0 1 0 1 0 1 1 0 1 0 0 0 11 0 1299.6095 Q9UPU5 Q9UPU5 1800 1810 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 5.1867E-16 219.5 By MS/MS 2 0 1 1 341020 341020 0 10949 2854 11443 27186 19220 19220 1 16951 0 NTFSSGSDLNAVK ENWTEGKGLIVRGAKNTFSSGSDLNAVKSL AKNTFSSGSDLNAVKSLGTPEDGMAVCMFM K N T V K S 1 0 2 1 0 0 0 1 0 0 1 1 0 1 0 3 1 0 0 1 0 0 13 0 1338.6416 Q9NTX5 Q9NTX5 109 121 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 3.5294E-59 303.33 By MS/MS 8 0 1 1 3085200 3085200 0 10950 2633 11444 27187 19221 19221 1 203530 0 NTGIICTIGPASR HMCRLDIDSPPITARNTGIICTIGPASRSV ARNTGIICTIGPASRSVETLKEMIKSGMNV R N T S R S 1 1 1 0 1 0 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 0 13 0 1358.6976 P14618 P14618 44 56 PKM Pyruvate kinase PKM yes yes 2 1.0015E-11 202.61 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 43040000 43040000 0 10951 588 11445 27188;27189;27190;27191;27192;27193;27194;27195 19222;19223;19224 19222 3 447730 0 NTIDINNFDGK VKLPHLWDAMVGPLRNTIDINNFDGKSLLD GPLRNTIDINNFDGKSLLDKGDSPAQELVN R N T G K S 0 0 3 2 0 0 0 1 0 2 0 1 0 1 0 0 1 0 0 0 0 0 11 0 1249.5939 O14981 O14981 1059 1069 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.0058726 104.07 By MS/MS 1.5 0.5 1 1 2 591740 591740 0 10952 143 11446 27196;27197 19225 19225 1 29364 0 NTIFTLGTR TAKKGFFSKPSLRSRNTIFTLGTRGSVISP PSLRSRNTIFTLGTRGSVISPTELEAPILV R N T T R G 0 1 1 0 0 0 0 1 0 1 1 0 0 1 0 0 3 0 0 0 0 0 9 0 1021.5556 Q8N1B4 Q8N1B4 342 350 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 0.0094652 105.98 By MS/MS 4.5 0.5 1 1 2 648590 648590 0 10953 1897 11447 27198;27199 19226 19226 1 20938 0 NTILFLR EGEAQRYFDHALTLRNTILFLRHNKDLVAQ FDHALTLRNTILFLRHNKDLVAQTAQPDQP R N T L R H 0 1 1 0 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 7 0 875.52289 Q658Y4 Q658Y4 447 453 FAM91A1 Protein FAM91A1 yes yes 2 0.020651 124.59 By MS/MS 4 0 1 1 570600 570600 0 10954 1668 11448 27200 19227 19227 1 15577 0 NTKHEISEMNR EELQQTAGRHGDDLRNTKHEISEMNRMIQR DDLRNTKHEISEMNRMIQRLRAEIDNVKKQ R N T N R M 0 1 2 0 0 0 2 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 11 1 1357.6408 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 381 391 KRT5 Keratin, type II cytoskeletal 5 no no 3 0.020536 77.674 By MS/MS By matching 3.83 2.54 1 1 1 2 1 2 4 344960 226260 118710 + 10955 50;61 11449 27201;27202;27203;27204;27205;27206 19228 19228 34 1 96499 162780 NTKLDDLFLK DVTSAKALYEHLTAKNTKLDDLFLKRYASL HLTAKNTKLDDLFLKRYASLLKYAGEPVPF K N T L K R 0 0 1 2 0 0 0 0 0 0 3 2 0 1 0 0 1 0 0 0 0 0 10 1 1205.6656 P42704 P42704 1348 1357 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 9.6699E-15 237.51 By MS/MS 3 0 2 2 5722900 5722900 0 10956 854 11450 27207;27208 19229;19230 19229 2 149400 0 NTKLDDLFLKR DVTSAKALYEHLTAKNTKLDDLFLKRYASL LTAKNTKLDDLFLKRYASLLKYAGEPVPFI K N T K R Y 0 1 1 2 0 0 0 0 0 0 3 2 0 1 0 0 1 0 0 0 0 0 11 2 1361.7667 P42704 P42704 1348 1358 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 7.1316E-05 161.19 By MS/MS 4 0.816 1 1 1 3 10733000 10733000 0 10957 854 11451 27209;27210;27211 19231 19231 1 286420 0 NTKVEISELNR EELQITAGQHGDSLKNTKVEISELNRVIQR DSLKNTKVEISELNRVIQRLRSEIDSVKKQ K N T N R V 0 1 2 0 0 0 2 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1301.6939 CON__ENSEMBL:ENSBTAP00000038253 CON__ENSEMBL:ENSBTAP00000038253 389 399 yes yes 3 0.00024952 138.76 By MS/MS 6.5 1.12 1 1 1 1 4 1007500 0 1007500 + 10958 32 11452 27212;27213;27214;27215 19232;19233 19232 2 0 3559100 NTLCAPEVISLINTR YLHGDDHQDSDEFCRNTLCAPEVISLINTR NTLCAPEVISLINTRMLFWACSTNKPEGYR R N T T R M 1 1 2 0 1 0 1 0 0 2 2 0 0 0 1 1 2 0 0 1 0 0 15 0 1699.8927 Q96CS3 Q96CS3 191 205 FAF2 FAS-associated factor 2 yes yes 2;3 4.8096E-10 212.1 By MS/MS 6.33 0.471 2 1 3 26826000 26826000 0 10959 2140 11453 27216;27217;27218 19234;19235;19236;19237;19238 19234 5 212960 0 NTLEWCLPVIDAK VIGEIDGEYRHDSRRNTLEWCLPVIDAKNK RRNTLEWCLPVIDAKNKSGSLEFSIAGQPN R N T A K N 1 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 1 1 0 1 0 0 13 0 1557.7861 P48444 P48444 436 448 ARCN1 Coatomer subunit delta yes yes 2 2.5784E-05 198.32 By MS/MS 6 0 1 1 7987100 7987100 0 10960 903 11454 27219 19239 19239 1 62284 0 NTLLIAGLQAR FPDKPITQYPHAVGKNTLLIAGLQARNNAR AVGKNTLLIAGLQARNNARVIFSGSLDFFS K N T A R N 2 1 1 0 0 1 0 1 0 1 3 0 0 0 0 0 1 0 0 0 0 0 11 0 1168.6928 P39656 P39656 240 250 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 5.5059E-12 213.8 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 33538000 33479000 59138 10961 825 11455 27220;27221;27222;27223;27224 19240;19241;19242 19240 3 441540 181370 NTNPNFVR QLYKEQLAKLMATLRNTNPNFVRCIIPNHE KLMATLRNTNPNFVRCIIPNHEKKAGKLDP R N T V R C 0 1 3 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 8 0 960.47773 P35580;P35579 P35579 663 670 MYH10;MYH9 Myosin-10;Myosin-9 no no 2 0.021557 104.75 By MS/MS 2.5 0.5 1 1 2 789970 789970 0 10962 793;794 11456 27225;27226 19243 19243 1 36378 0 NTPLCDSFVFR ILAYNYKMEQISKGRNTPLCDSFVFRKVRS SKGRNTPLCDSFVFRKVRSLLGGNIRLLLC R N T F R K 0 1 1 1 1 0 0 0 0 0 1 0 0 2 1 1 1 0 0 1 0 0 11 0 1354.634 O95573 O95573 425 435 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 0.001281 129.89 By MS/MS 6 0.816 1 1 1 3 6495900 6495900 0 10963 400 11457 27227;27228;27229 19244 19244 1 241360 0 NTPLCDSFVFRK ILAYNYKMEQISKGRNTPLCDSFVFRKVRS KGRNTPLCDSFVFRKVRSLLGGNIRLLLCG R N T R K V 0 1 1 1 1 0 0 0 0 0 1 1 0 2 1 1 1 0 0 1 0 0 12 1 1482.7289 O95573 O95573 425 436 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.037693 71.085 By MS/MS 5 0 1 1 1816400 1816400 0 10964 400 11458 27230 19245 19245 1 74661 0 NTPSFLIACNK AEFLYQVLIDSMGLKNTPSFLIACNKQDIA MGLKNTPSFLIACNKQDIAMAKSAKLIQQQ K N T N K Q 1 0 2 0 1 0 0 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1263.6282 Q9Y5M8 Q9Y5M8 171 181 SRPRB Signal recognition particle receptor subunit beta yes yes 2 7.1924E-05 166.07 By MS/MS 8.5 0.5 1 1 2 6010100 6010100 0 10965 2976 11459 27231;27232 19246;19247 19246 2 718230 0 NTQIIIQEESGIPK EALGLPTVKSARIARNTQIIIQEESGIPKV RNTQIIIQEESGIPKVADPWGGSYMMECLT R N T P K V 0 0 1 0 0 2 2 1 0 4 0 1 0 0 1 1 1 0 0 0 0 0 14 0 1568.841 P22033 P22033 407 420 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 1.5226E-25 256.96 By MS/MS 3.5 1.5 1 1 2 3355600 3355600 0 10966 653 11460 27233;27234 19248;19249 19249 2 144590 0 NTSFAYPAIR LMVRKPALELLHYLKNTSFAYPAIRYLLYG LHYLKNTSFAYPAIRYLLYGEKGTGKTLSL K N T I R Y 2 1 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 10 0 1138.5771 P51398 P51398 114 123 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 4.924E-11 210.6 By MS/MS 7.5 0.5 1 1 2 15886000 15886000 0 10967 963 11461 27235;27236 19250 19250 1 302250 0 NTTHGSDSVVSASR APDSIRGSFGLTDTRNTTHGSDSVVSASRE RNTTHGSDSVVSASREIAAFFPDFSEQRWY R N T S R E 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 4 2 0 0 2 0 0 14 0 1416.6593 O75414 O75414 126 139 NME6 Nucleoside diphosphate kinase 6 yes yes 2 0.0052944 102.73 By MS/MS 9 0 1 1 343350 343350 0 10968 306 11462 27237 19251 19251 1 197050 0 NTTIPTK GIETAGGVMTVLIKRNTTIPTKQTQTFTTY VMTVLIKRNTTIPTKQTQTFTTYSDNQPGV R N T T K Q 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 3 0 0 0 0 0 7 0 773.42832 P38646;P11142;P54652 P11142 417 423 HSPA9;HSPA8;HSPA2 Stress-70 protein, mitochondrial;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 2 0.041499 107.01 By MS/MS By matching 5 2.2 1 1 2 1 1 1 4 3 22923000 22740000 182960 10969 546;820 11463 27238;27239;27240;27241;27242;27243;27244 19252 19252 1 911200 461580 NTVVATGGYGR ALCIEDGSIHRIRAKNTVVATGGYGRTYFS IRAKNTVVATGGYGRTYFSCTSAHTSTGDG K N T G R T 1 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 2 0 1 2 0 0 11 0 1093.5516 P31040 P31040 251 261 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 3.0245E-16 225.22 By MS/MS By matching 5 2.1 1 1 2 1 4 1 8571500 8558800 12701 10970 749 11464 27245;27246;27247;27248;27249 19253;19254;19255 19255 3 242460 38952 NTVVLFVPQQEAWVVER ASGRAPRRASSGLPRNTVVLFVPQQEAWVV VVLFVPQQEAWVVERMGRFHRILEPGLNIL R N T E R M 1 1 1 0 0 2 2 0 0 0 1 0 0 1 1 0 1 1 0 5 0 0 17 0 2013.0684 Q9UJZ1 Q9UJZ1 35 51 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.00079811 119.32 By MS/MS 7 0 1 1 231000 231000 0 10971 2806 11465 27250 19256 19256 1 4128 0 NTWDCGLQILK VIKTRMQGLEAHKYRNTWDCGLQILKKEGL HKYRNTWDCGLQILKKEGLKAFYKGTVPRL R N T L K K 0 0 1 1 1 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 0 0 11 0 1346.6653 P53007 P53007 258 268 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 1.8844E-17 232.72 By MS/MS 8.5 0.5 1 1 2 6526600 6526600 0 10972 996 11466 27251;27252 19257 19257 1 464630 0 NTWDCGLQILKK VIKTRMQGLEAHKYRNTWDCGLQILKKEGL KYRNTWDCGLQILKKEGLKAFYKGTVPRLG R N T K K E 0 0 1 1 1 1 0 1 0 1 2 2 0 0 0 0 1 1 0 0 0 0 12 1 1474.7602 P53007 P53007 258 269 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 1.9327E-07 194.12 By MS/MS 8 0 1 1 1050100 1050100 0 10973 996 11467 27253 19258 19258 1 69278 0 NTWLYQALR TADSTICHILNLYRRNTWLYQALREGTRVQ LNLYRRNTWLYQALREGTRVQSVEQIREVA R N T L R E 1 1 1 0 0 1 0 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 9 0 1163.6087 P56545 P56545 149 157 CTBP2 C-terminal-binding protein 2 yes yes 2 0.00071506 148.52 By MS/MS 7 0 1 1 534510 534510 0 10974 1047 11468 27254 19259 19259 1 9551.9 0 NTYYASIAK MSYQRAAWEVDSGRRNTYYASIAKAFAGDI VDSGRRNTYYASIAKAFAGDIANQLATDAV R N T A K A 2 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 1 0 2 0 0 0 9 0 1029.5131 P11310 P11310 350 358 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.020122 96.665 By MS/MS 7 0 1 1 9943700 9943700 0 10975 552 11469 27255 19260 19260 1 177700 0 NVAIFTAGQESPIILR NFPTSSIAFLGQNERNVAIFTAGQESPIIL VAIFTAGQESPIILRDGNGTIYPMAKDCMG R N V L R D 2 1 1 0 0 1 1 1 0 3 1 0 0 1 1 1 1 0 0 1 0 0 16 0 1727.957 O95071 O95071 798 813 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 2.845E-50 281.32 By MS/MS 2.5 1.12 1 1 1 1 4 1441100 1441100 0 10976 364 11470 27256;27257;27258;27259 19261;19262;19263;19264;19265 19264 5 48190 0 NVALGNAIR PYLSEVLTFCLEVARNVALGNAIRIRILCC CLEVARNVALGNAIRIRILCCLTFLVKVKS R N V I R I 2 1 2 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 926.52976 Q8TEX9 Q8TEX9 256 264 IPO4 Importin-4 yes yes 2 0.001962 130.22 By MS/MS 4.5 0.5 1 1 2 3000800 3000800 0 10977 2005 11471 27260;27261 19266 19266 1 91771 0 NVCTEAGMFAIR AIVKLSDGFNGADLRNVCTEAGMFAIRADH DLRNVCTEAGMFAIRADHDFVVQEDFMKAV R N V I R A 2 1 1 0 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 12 0 1367.6326 P62333 P62333 345 356 PSMC6 26S protease regulatory subunit 10B yes yes 2 1.891E-05 170.89 By MS/MS 7 0 1 1 3206800 3206800 0 10978 1133 11472 27262 19267 19267 886 1 57307 0 NVDEAINFINER QEEIFGPILPIVPVKNVDEAINFINEREKP PVKNVDEAINFINEREKPLALYVFSHNHKL K N V E R E 1 1 3 1 0 0 2 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 12 0 1432.6947 P51648 P51648 344 355 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2 1.9966E-24 294.01 By MS/MS 8 1.41 1 1 1 1 1 5 22698000 22698000 0 10979 972 11473 27263;27264;27265;27266;27267 19268;19269;19270;19271 19268 4 473280 0 NVDILKDPETVK LPNQVWDSIIQQATKNVDILKDPETVKQLG ATKNVDILKDPETVKQLGSILKTNVRACKA K N V V K Q 0 0 1 2 0 0 1 0 0 1 1 2 0 0 1 0 1 0 0 2 0 0 12 1 1369.7453 O14980 O14980 675 686 XPO1 Exportin-1 yes yes 2;3 7.8566E-07 192.44 By MS/MS 4.2 0.748 1 2 2 5 12155000 12155000 0 10980 142 11474 27268;27269;27270;27271;27272 19272;19273 19273 2 340870 0 NVDLLSDMVQEHDEPILK EDPKGIPEFWLTVFKNVDLLSDMVQEHDEP LLSDMVQEHDEPILKHLKDIKVKFSDAGQP K N V L K H 0 0 1 3 0 1 2 0 1 1 3 1 1 0 1 1 0 0 0 2 0 0 18 0 2094.0303 P55209 P55209 177 194 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2;3 1.3807E-18 198.87 By MS/MS 6 0 2 2 10033000 10033000 0 10981 1030 11475 27273;27274 19274;19275 19275 2 78237 0 NVDLSTFYQNR IQCYTEAISLCPTEKNVDLSTFYQNRAAAF PTEKNVDLSTFYQNRAAAFEQLQKWKEVAQ K N V N R A 0 1 2 1 0 1 0 0 0 0 1 0 0 1 0 1 1 0 1 1 0 0 11 0 1355.647 O94826 O94826 149 159 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 5.3979E-16 218.94 By MS/MS 5.5 0.5 1 1 2 9871000 9871000 0 10982 353 11476 27275;27276 19276 19276 1 372840 0 NVDSNNKELSIAIR NKLQYFMEQFYGIIRNVDSNNKELSIAIRG RNVDSNNKELSIAIRGYGLFAGPCKVINAK R N V I R G 1 1 3 1 0 0 1 0 0 2 1 1 0 0 0 2 0 0 0 1 0 0 14 1 1571.8267 P78527 P78527 351 364 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.00013191 173.19 By MS/MS 2.29 1.03 2 2 2 1 7 4564500 4564500 0 10983 1197 11477 27277;27278;27279;27280;27281;27282;27283 19277;19278;19279 19277 3 213770 0 NVDTVLMELGVR VRKQVEKIKNSMDGKNVDTVLMELGVRFHR DGKNVDTVLMELGVRFHRLIYEHLQQYSYS K N V V R F 0 1 1 1 0 0 1 1 0 0 2 0 1 0 0 0 1 0 0 3 0 0 12 0 1344.7071 O00471 O00471 598 609 EXOC5 Exocyst complex component 5 yes yes 2 0.011211 89.9 By MS/MS 5 0 1 1 71988 71988 0 10984 98 11478 27284 19280 19280 67 1 2959 0 NVDVYDKR LLISKLQDEFENRTRNVDVYDKRENPLLPE EFENRTRNVDVYDKRENPLLPEEEEQRAIA R N V K R E 0 1 1 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 2 0 0 8 1 1007.5036 P78344 P78344 181 188 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0094541 154.12 By MS/MS 5 0.816 1 1 1 3 6037500 6037500 0 10985 1192 11479 27285;27286;27287 19281 19281 1 165910 0 NVEAMNFADIER VAVATPRGLVVPVIRNVEAMNFADIERTIT VIRNVEAMNFADIERTITELGEKARKNELA R N V E R T 2 1 2 1 0 0 2 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 12 0 1407.6453 P36957 P36957 334 345 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.0010302 127.56 By matching By MS/MS 6.33 0.471 2 1 1 2 1983200 1772100 211170 10986 812 11480 27288;27289;27290 19282;19283 19282 556 2 13819 681400 NVEDDYIANLR FSEEYTGSSLKTVERNVEDDYIANLRNNCW TVERNVEDDYIANLRNNCWKEKQQKEGLLY R N V L R N 1 1 2 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1320.631 Q9NXW2 Q9NXW2 316 326 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 1.1143E-10 228.64 By MS/MS 7.5 0.5 1 1 2 11223000 11223000 0 10987 2694 11481 27291;27292 19284 19284 1 213410 0 NVEDFTGPR RSVPVRLHVSRIMLKNVEDFTGPRERSDLG SRIMLKNVEDFTGPRERSDLGFITFDITAD K N V P R E 0 1 1 1 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 9 0 1033.4829 P61009 P61009 50 58 SPCS3 Signal peptidase complex subunit 3 yes yes 2 0.0018429 131.5 By MS/MS By matching 9.33 0.471 2 1 2 1 2974400 2947100 27320 10988 1081 11482 27293;27294;27295 19285 19285 1 1718900 294430 NVEELVIVLK RKKTLQLALDLVSSRNVEELVIVLKKEVIK LVSSRNVEELVIVLKKEVIKTNNVSEHEDT R N V L K K 0 0 1 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 3 0 0 10 0 1154.6911 P53618 P53618 352 361 COPB1 Coatomer subunit beta yes yes 2 8.6878E-05 167.12 By MS/MS 4.5 0.5 1 1 2 1280400 1280400 0 10989 1004 11483 27296;27297 19286;19287 19286 2 38375 0 NVEELVIVLKK RKKTLQLALDLVSSRNVEELVIVLKKEVIK VSSRNVEELVIVLKKEVIKTNNVSEHEDTD R N V K K E 0 0 1 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 3 0 0 11 1 1282.786 P53618 P53618 352 362 COPB1 Coatomer subunit beta yes yes 2;3 1.9772E-10 213.8 By MS/MS 4.86 1.25 1 2 2 1 1 7 10520000 10520000 0 10990 1004 11484 27298;27299;27300;27301;27302;27303;27304 19288;19289;19290 19290 3 290560 0 NVEGQDMLYQSLK SSKLQSSNIFTVAKRNVEGQDMLYQSLKLT KRNVEGQDMLYQSLKLTNGIWVLAELRIQP R N V L K L 0 0 1 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 1 1 0 0 13 0 1523.729 P63010;Q10567 Q10567 889 901 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 0.0049165 103.88 By MS/MS 4 0 1 1 404200 404200 0 10991 1300;1167 11485 27305 19291 19291 1 11034 0 NVELVEGEEGR IVGTGSNACYMEEMRNVELVEGEEGRMCVN EEMRNVELVEGEEGRMCVNMEWGAFGDNGC R N V G R M 0 1 1 0 0 0 4 2 0 0 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1229.5888 P52789 P52789 692 702 HK2 Hexokinase-2 yes yes 2 0.0022234 119.39 By MS/MS 4 0 1 1 1859500 1859500 0 10992 992 11486 27306 19292 19292 1 50761 0 NVESFASMLR ELLQKVEPLQKGSPKNVESFASMLRHSPLT KGSPKNVESFASMLRHSPLTQMGPAKDKLV K N V L R H 1 1 1 0 0 0 1 0 0 0 1 0 1 1 0 2 0 0 0 1 0 0 10 0 1152.5597 Q9Y2Q9 Q9Y2Q9 76 85 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 2 1.307E-15 218.58 By MS/MS By matching 9.5 0.5 2 2 3 1 3421400 3405400 15968 10993 2896 11487;11488 27307;27308;27309;27310 19293;19294;19295 19295 1669 3 2192900 409570 NVESGEEELASK WDRREPLSLINVRKRNVESGEEELASKLDH RKRNVESGEEELASKLDHYKAKATRHIFLI R N V S K L 1 0 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1290.5939 Q96HS1 Q96HS1 77 88 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.00067657 137.01 By matching By MS/MS 8.5 0.5 1 1 1 1 278000 141750 136250 10994 2196 11489 27311;27312 19296 19296 1 81350 1162400 NVESYTK YPTKTQTMRVKLASRNVESYTKLGNPTRSE MRVKLASRNVESYTKLGNPTRSEDLLDYGP R N V T K L 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 0 7 0 839.4025 P04843 P04843 181 187 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.027438 116.73 By MS/MS By matching 5.33 0.471 2 1 2 1 3477000 3448600 28480 10995 458 11490 27313;27314;27315 19297 19297 1 127300 84271 NVEVLHLGK WNGLEELNNAIKYTKNVEVLHLGKVWIPDD AIKYTKNVEVLHLGKVWIPDDLRKRLNIEM K N V G K V 0 0 1 0 0 0 1 1 1 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 1007.5764 O43933 O43933 403 411 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.044601 85.862 By MS/MS 3.5 0.5 1 1 2 889430 889430 0 10996 235 11491 27316;27317 19298 19298 1 23282 0 NVFEETSVKSEDEPPALPPK RSATSSSVSNVVITKNVFEETSVKSEDEPP TSVKSEDEPPALPPKIGTPTRPCPLPPGKR K N V P K I 1 0 1 1 0 0 4 0 0 0 1 2 0 1 4 2 1 0 0 2 0 0 20 1 2212.0899 P42566 P42566 755 774 EPS15 Epidermal growth factor receptor substrate 15 yes yes 3 0.0051126 73.057 By matching By MS/MS 2.75 1.3 1 1 2 1 3 7829200 5991700 1837500 10997 851 11492 27318;27319;27320;27321 19299 19299 1 163570 2372900 NVFNALIR TADGRLPADQRRGYKNVFNALIRITREEGV DQRRGYKNVFNALIRITREEGVLTLWRGCI K N V I R I 1 1 2 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 8 0 945.5396 Q02978 Q02978 163 170 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.0030756 149.4 By MS/MS 7 3.54 1 1 1 1 4 45869000 45869000 0 10998 1260 11493 27322;27323;27324;27325 19300;19301;19302;19303;19304 19301 5 3287700 0 NVGLDIEAEVPAVK EVISKLYAVHQEGNKNVGLDIEAEVPAVKD KNVGLDIEAEVPAVKDMLEAGILDTYLGKY K N V V K D 2 0 1 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 3 0 0 14 0 1452.7824 P50990 P50990 477 490 CCT8 T-complex protein 1 subunit theta yes yes 2 4.6473E-18 222.72 By MS/MS 6.14 3.18 1 1 1 1 1 1 1 7 48045000 48045000 0 10999 955 11494 27326;27327;27328;27329;27330;27331;27332 19305;19306;19307;19308 19306 4 1174900 0 NVIAALNSR EFSPGSKKLVVATEKNVIAALNSRTGEILW VVATEKNVIAALNSRTGEILWRHVDKGTAE K N V S R T 2 1 2 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 956.54033 Q8N766 Q8N766 61 69 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.0066554 112.11 By MS/MS 1.5 0.5 1 1 2 404980 404980 0 11000 1931 11495 27333;27334 19309;19310 19309 2 19843 0 NVIAVLEEFMK LKIVKVEHEEMPEAKNVIAVLEEFMKEALD PEAKNVIAVLEEFMKEALDQSF________ K N V M K E 1 0 1 0 0 0 2 0 0 1 1 1 1 1 0 0 0 0 0 2 0 0 11 0 1291.6846 Q9HAS0 Q9HAS0 379 389 C17orf75 Protein Njmu-R1 yes yes 2 0.010002 112.83 By MS/MS 7 0 1 1 80280 80280 0 11001 2543 11496 27335 19311 19311 1535 0 1434.6 0 NVICDKCEGR EDLYNGATRKLALQKNVICDKCEGRGGKKG LALQKNVICDKCEGRGGKKGAVECCPNCRG K N V G R G 0 1 1 1 2 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 1 1249.5543 P31689 P31689 131 140 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 0.0015812 156.16 By MS/MS By matching 6.67 0.745 3 2 1 5 1 23544000 23530000 13560 11002 755 11497 27336;27337;27338;27339;27340;27341 19312;19313;19314 19313 3 292400 41587 NVIEAVYNR NIPSLPPGGELASKRNVIEAVYNRLNPYKN ELASKRNVIEAVYNRLNPYKNDDTDSTSTD R N V N R L 1 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1076.5615 P35813 P35813 356 364 PPM1A Protein phosphatase 1A yes yes 2 0.0020886 128.86 By MS/MS 7 0 1 1 699620 699620 0 11003 799 11498 27342 19315 19315 1 12502 0 NVIFQPVAELK FTTDDSICVLGISKRNVIFQPVAELKKQTD ISKRNVIFQPVAELKKQTDFEHRIPKEQWW R N V L K K 1 0 1 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 0 2 0 0 11 0 1256.7129 Q01813 Q01813 726 736 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 2 0.0012307 142 By MS/MS 3.33 1.7 1 1 1 3 1308700 1308700 0 11004 1246 11499 27343;27344;27345 19316;19317 19317 1 53871 0 NVIISSAAERPLEIR TISSALNLMQICKGKNVIISSAAERPLEIR NVIISSAAERPLEIRGPYDVANLGLLFGLS K N V I R G 2 2 1 0 0 0 2 0 0 3 1 0 0 0 1 2 0 0 0 1 0 0 15 1 1666.9366 P78346 P78346 184 198 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.045487 100.88 By MS/MS 8 0 1 1 796580 796580 0 11005 1193 11500 27346 19318 19318 1 52550 0 NVIVLQTVLQEVR VLLHQIDVLEDPAIRNVIVLQTVLQEVRNR IRNVIVLQTVLQEVRNRSAPVYKRIRDVTN R N V V R N 0 1 1 0 0 2 1 0 0 1 2 0 0 0 0 0 1 0 0 4 0 0 13 0 1509.8879 Q9Y2L1 Q9Y2L1 87 99 DIS3 Exosome complex exonuclease RRP44 yes yes 2 3.5294E-59 303.33 By MS/MS 4.33 1.25 1 1 1 3 3254600 3254600 0 11006 2892 11501 27347;27348;27349 19319;19320;19321 19321 3 53141 0 NVIVNGLVLASDGQK LLVLATALFGQPPFKNVIVNGLVLASDGQK NVIVNGLVLASDGQKMSKRKKNYPDPVSII K N V Q K M 1 0 2 1 0 1 0 2 0 1 2 1 0 0 0 1 0 0 0 3 0 0 15 0 1525.8464 P41252 P41252 586 600 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2;3 1.0108E-16 215.02 By MS/MS 3.4 0.49 3 2 5 7323600 7323600 0 11007 840 11502 27350;27351;27352;27353;27354 19322;19323;19324 19324 2 191820 0 NVKPEDVKR TRSRKLPHELCTLIRNVKPEDVKRVASKML LCTLIRNVKPEDVKRVASKMLRGKPAVAAL R N V K R V 0 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 9 2 1083.6037 Q10713 Q10713 471 479 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 3 0.025162 87.258 By MS/MS 6 0 1 1 2035700 2035700 0 11008 1301 11503 27355 19325 19325 1 15874 0 NVLAPYAVPSELVLVEEIPR EGHSLSHRELKEWARNVLAPYAVPSELVLV YAVPSELVLVEEIPRNQMGKIDKKALIRHF R N V P R N 2 1 1 0 0 0 3 0 0 1 3 0 0 0 3 1 0 0 1 4 0 0 20 0 2207.2202 Q4G176 Q4G176 539 558 ACSF3 Acyl-CoA synthetase family member 3, mitochondrial yes yes 2;3 5.6522E-06 149.99 By MS/MS 6 0 2 2 1875500 1875500 0 11009 1578 11504 27356;27357 19326;19327 19326 2 14625 0 NVLCSACSGQGGK EDLYNGKTTKLQLSKNVLCSACSGQGGKSG SKNVLCSACSGQGGKSGAVQKCSACRGRGV K N V G K S 1 0 1 0 2 1 0 3 0 0 1 1 0 0 0 2 0 0 0 1 0 0 13 0 1336.5864 O60884 O60884 140 152 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 3.2419E-05 187.58 By MS/MS 8 1.41 1 1 1 1 1 5 16016000 16016000 0 11010 273 11505 27358;27359;27360;27361;27362 19328;19329 19329 2 445880 0 NVLITDFFGSVR STPGHRTDLFQRDPKNVLITDFFGSVRKVE DPKNVLITDFFGSVRKVEITTETIKLQQDS K N V V R K 0 1 1 1 0 0 0 1 0 1 1 0 0 2 0 1 1 0 0 2 0 0 12 0 1366.7245 Q92643 Q92643 297 308 PIGK GPI-anchor transamidase yes yes 2 0.0049208 122.55 By MS/MS 7 0 1 1 268960 268960 0 11011 2072 11506 27363 19330 19330 1 4806.4 0 NVLIVEDIIDTGK IKVIGGDDLSTLTGKNVLIVEDIIDTGKTM GKNVLIVEDIIDTGKTMQTLLSLVRQYNPK K N V G K T 0 0 1 2 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1427.7872 P00492 P00492 129 141 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.003102 113.77 By MS/MS 8.5 0.5 1 1 2 191420 191420 0 11012 429 11507 27364;27365 19331 19331 1 82144 0 NVLLDPQLVPGGGASEMAVAHALTEK SEVERNLQDAMQVCRNVLLDPQLVPGGGAS GGASEMAVAHALTEKSKAMTGVEQWPYRAV R N V E K S 4 0 1 1 0 1 2 3 1 0 4 1 1 0 2 1 1 0 0 3 0 0 26 0 2616.3581 P49368 P49368 400 425 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 0.0001774 95.9 By MS/MS 5.83 0.373 1 5 6 170400000 170400000 0 11013 916 11508;11509 27366;27367;27368;27369;27370;27371 19332;19333;19334;19335;19336 19336 680 5 1330500 0 NVLLLGEDGAGK SEVSTRSRSKLPAGKNVLLLGEDGAGKTSL AGKNVLLLGEDGAGKTSLIRKIQGIEEYKK K N V G K T 1 0 1 1 0 0 1 3 0 0 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1184.6401 Q9Y6G9 Q9Y6G9 69 80 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 3.5347E-05 169.21 By MS/MS By matching 6 0 2 1 1 5819400 5773800 45543 11014 3005 11510 27372;27373 19337 19337 1 45025 139680 NVLLTGATGFLGK ______________________________ GKNVLLTGATGFLGKVLLEKLLRSCPKVNS K N V G K V 1 0 1 0 0 0 0 3 0 0 3 1 0 1 0 0 2 0 0 1 0 0 13 0 1289.7343 Q8WVX9 Q8WVX9 12 24 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 0.00020592 148.78 By MS/MS 6 0 1 1 10310000 10310000 0 11015 2036 11511 27374 19338 19338 1 80396 0 NVLTESAR VIDHTKGQPSEGESRNVLTESARIARGKIT PSEGESRNVLTESARIARGKITDLANLSAA R N V A R I 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 0 888.46649 P0DPI2;A0A0B4J2D5 P0DPI2 104 111 yes no 2 0.0079109 126.24 By MS/MS 8.5 0.5 1 1 2 6919900 6919900 0 11016 4 11512 27375;27376 19339 19339 1 2903400 0 NVLVSEDNVAK YLEGNNFVHRDLAARNVLVSEDNVAKVSDF LAARNVLVSEDNVAKVSDFGLTKEASSTQD R N V A K V 1 0 2 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 11 0 1186.6194 P41240 P41240 319 329 CSK Tyrosine-protein kinase CSK yes yes 2 0.018363 90.827 By MS/MS 7 0 1 1 1662400 1662400 0 11017 839 11513 27377 19340 19340 1 29707 0 NVMEEGKDFQPSR WPAKQYPLVTPNEERNVMEEGKDFQPSRST ERNVMEEGKDFQPSRSTAQQELDGKPASPT R N V S R S 0 1 1 1 0 1 2 1 0 0 0 1 1 1 1 1 0 0 0 1 0 0 13 1 1535.7038 P35606 P35606 834 846 COPB2 Coatomer subunit beta yes yes 3 0.027022 68.277 By MS/MS 1.5 0.5 1 1 2 676640 676640 0 11018 795 11514 27378;27379 19341;19342 19341 545 2 33316 0 NVMILTNPVAAK LIAKLKSDGIPMYKRNVMILTNPVAAKKNV YKRNVMILTNPVAAKKNVSINTVTYEWAPP R N V A K K 2 0 2 0 0 0 0 0 0 1 1 1 1 0 1 0 1 0 0 2 0 0 12 0 1269.7115 Q9UGI8 Q9UGI8 90 101 TES Testin yes yes 2 0.00013626 152.7 By MS/MS 7 0 1 1 1698300 1698300 0 11019 2772 11515 27380 19343 19343 1619 1 30350 0 NVQAEEMVEFSSGLK VLSIGDGIARVHGLRNVQAEEMVEFSSGLK NVQAEEMVEFSSGLKGMSLNLEPDNVGVVV R N V L K G 1 0 1 0 0 1 3 1 0 0 1 1 1 1 0 2 0 0 0 2 0 0 15 0 1666.7872 P25705 P25705 89 103 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 1.6148E-28 240.37 By MS/MS 6 0 2 2 7384800 7384800 0 11020 687 11516;11517 27381;27382 19344;19345 19345 461 2 57587 0 NVQALEIELQSQLALK EQISSYKSEITELRRNVQALEIELQSQLAL VQALEIELQSQLALKQSLEASLAETEGRYC R N V L K Q 2 0 1 0 0 3 2 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 16 0 1796.0044 CON__P13645;P13645 CON__P13645 371 386 KRT10 Keratin, type I cytoskeletal 10 yes no 2 2.2849E-21 229.56 By MS/MS 9 0 1 1 286560 0 286560 + 11021 49 11518 27383 19346;19347 19347 2 0 3088300 NVQDAIADAEQR QRLQGEIAHVKKQCKNVQDAIADAEQRGEH QCKNVQDAIADAEQRGEHALKDARNKLNDL K N V Q R G 3 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1328.6321 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 419 430 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.3856E-06 176.18 By MS/MS By MS/MS 5 3.05 2 2 2 1 1 1 1 1 2 1 5 9 7632700 4571200 3061500 + 11022 52 11519 27384;27385;27386;27387;27388;27389;27390;27391;27392;27393;27394;27395;27396;27397 19348;19349;19350;19351;19352;19353;19354;19355;19356;19357;19358;19359;19360;19361 19350 14 1068800 9431700 NVQGIIEILK PHYFWPLLVGRRKEKNVQGIIEILKGMQEL RRKEKNVQGIIEILKGMQELGVHPDQETYT K N V L K G 0 0 1 0 0 1 1 1 0 3 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1125.6758 P42704 P42704 454 463 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0001288 172.59 By MS/MS 5 1.41 1 1 1 1 1 5 47876000 47876000 0 11023 854 11520 27398;27399;27400;27401;27402 19362;19363;19364;19365;19366 19362 5 1232800 0 NVQILNMVTR LGLKETQNMAWSKPRNVQILNMVTRQGALW WSKPRNVQILNMVTRQGALWANTLGSLALL R N V T R Q 0 1 2 0 0 1 0 0 0 1 1 0 1 0 0 0 1 0 0 2 0 0 10 0 1186.6492 O14925 O14925 113 122 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 2 1.6412E-15 214.83 By MS/MS 7.25 3.63 1 2 1 4 16507000 16507000 0 11024 133 11521;11522 27403;27404;27405;27406 19367;19368;19369;19370 19370 85 4 9658700 0 NVQLQENEIR IIQRLLEVRGSKPGKNVQLQENEIRGLCLK SKPGKNVQLQENEIRGLCLKSREIFLSQPI K N V I R G 0 1 2 0 0 2 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1241.6364 P36873 P36873 27 36 PPP1CC Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes yes 2 5.301E-07 188.87 By MS/MS 8.5 0.5 1 1 2 3273600 3273600 0 11025 810 11523 27407;27408 19371 19371 1 311360 0 NVQLSLLTER RVEDLVKQYFQTAEKNVQLSLLTERGMGEA QTAEKNVQLSLLTERGMGEAVQEFVDKEEK K N V E R G 0 1 1 0 0 1 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 10 0 1171.6561 P49959 P49959 443 452 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.00054013 143.4 By MS/MS 5 0 1 1 561780 561780 0 11026 942 11524 27409 19372 19372 1 23091 0 NVQLTENEIR IIGRLLEVQGSRPGKNVQLTENEIRGLCLK SRPGKNVQLTENEIRGLCLKSREIFLSQPI K N V I R G 0 1 2 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1214.6255 P62136 P62136 27 36 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 7.5821E-23 251.56 By MS/MS 7.5 0.5 1 1 2 5744100 5744100 0 11027 1114 11525 27410;27411 19373 19373 1 359010 0 NVQQHEK KHKPDFISLFKNPPKNVQQHEKVQKASTEG SLFKNPPKNVQQHEKVQKASTEGVAIQGQQ K N V E K V 0 0 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 7 0 881.43553 Q92621 Q92621 60 66 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.016561 135.84 By MS/MS 1.5 0.5 1 1 2 100480 100480 0 11028 2070 11526 27412;27413 19374 19374 1 4992 0 NVSGGYLVLYK PADVQTPLIIQPEQRNVSGGYLVLYKMNYA PEQRNVSGGYLVLYKMNYATRIVTLEEEPI R N V Y K M 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 1 0 0 2 2 0 0 11 0 1211.655 Q9NR09 Q9NR09 819 829 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.026798 82.831 By MS/MS 1.5 0.5 1 1 2 173050 173050 0 11029 2596 11527 27414;27415 19375 19375 1 8497.5 0 NVSSFPDDATSPLQENR ELRKAKKDDQMLKRRNVSSFPDDATSPLQE SSFPDDATSPLQENRNNQGTVNWSVDDIVK R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 P52292 P52292 52 68 KPNA2 Importin subunit alpha-1 yes yes 2 5.4982E-19 220.85 By MS/MS 6 0 1 1 3818000 3818000 0 11030 983 11528 27416 19376 19376 1 29773 0 NVSTGDVNVEMNAAPGVDLTQLLNNMR AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE R N V M R S 2 1 5 2 0 1 1 2 0 0 3 0 2 0 1 1 2 0 0 4 0 0 27 0 2871.3855 CON__P13645;P13645 CON__P13645 296 322 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 8.1737E-12 121.56 By MS/MS By MS/MS 5 3.14 2 2 4 2 2 3 2 9 8 9683600 4900000 4783500 + 11031 49 11529 27417;27418;27419;27420;27421;27422;27423;27424;27425;27426;27427;27428;27429;27430;27431;27432;27433 19377;19378;19379;19380;19381;19382;19383;19384;19385;19386;19387;19388 19383 32;33 12 1232900 41661000 NVTAIQGPGGK KIFDAAKAPIQWEERNVTAIQGPGGKWMIP WEERNVTAIQGPGGKWMIPSEAKESMDKNK R N V G K W 1 0 1 0 0 1 0 3 0 1 0 1 0 0 1 0 1 0 0 1 0 0 11 0 1040.5615 P50213 P50213 67 77 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.018799 101.38 By MS/MS 7 0 1 1 9361300 9361300 0 11032 943 11530 27434 19389 19389 1 167290 0 NVTDTDILALER GAVNCPYTYMSYFLRNVTDTDILALERRLL FLRNVTDTDILALERRLLQTMDMIISKKKR R N V E R R 1 1 1 2 0 0 1 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 12 0 1358.7042 P0CG08;B7ZAQ6 P0CG08 180 191 GPR89B;GPR89A Golgi pH regulator B;Golgi pH regulator A yes no 2 7.404E-11 199.12 By MS/MS 2 0.816 1 1 1 3 843340 843340 0 11033 28 11531 27435;27436;27437 19390 19390 1 35332 0 NVTELNEPLSNEER AEQAERYDDMAAAMKNVTELNEPLSNEERN KNVTELNEPLSNEERNLLSVAYKNVVGARR K N V E R N 0 1 3 0 0 0 4 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1642.7798 P61981 P61981 29 42 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 3.562E-46 273.74 By MS/MS 8 0 1 1 10348000 10348000 0 11034 1111 11532 27438 19391 19391 1 682660 0 NVTHIDQALQEAHR DDDKFDIYTIAFGIRNVTHIDQALQEAHRV RNVTHIDQALQEAHRVLKPGGRFLCLEFSQ R N V H R V 2 1 1 1 0 2 1 0 2 1 1 0 0 0 0 0 1 0 0 1 0 0 14 0 1630.8176 Q5HYK3 Q5HYK3 221 234 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 3 0.0036204 99.834 By MS/MS 8 0 1 1 2486600 2486600 0 11035 1602 11533 27439 19392 19392 1 164040 0 NVTVQPDDPISFMQLTAK LEEEKLSQKKESEKRNVTVQPDDPISFMQL VQPDDPISFMQLTAKNEMNCKEDQFQLSLL R N V A K N 1 0 1 2 0 2 0 0 0 1 1 1 1 1 2 1 2 0 0 2 0 0 18 0 2003.0034 P53618 P53618 662 679 COPB1 Coatomer subunit beta yes yes 2 1.8555E-25 222.88 By MS/MS 4.2 0.748 1 2 2 5 6080300 6080300 0 11036 1004 11534;11535 27440;27441;27442;27443;27444 19393;19394;19395 19393 774 3 172160 0 NVVAECLGK ALLLKHCECAEEGTRNVVAECLGKLTLIDP AEEGTRNVVAECLGKLTLIDPETLLPRLKG R N V G K L 1 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 0 988.50117 Q86VP6 Q86VP6 949 957 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.013786 100.25 By MS/MS 3.67 0.471 1 2 3 4306000 4306000 0 11037 1829 11536 27445;27446;27447 19396;19397 19397 2 115920 0 NVVHELR APQVSHKPGGEPKIKNVVHELRITNQVIYL PGGEPKIKNVVHELRITNQVIYLNPPIEEC K N V L R I 0 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 7 0 865.477 Q14204 Q14204 957 963 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.048429 106.04 By MS/MS 1 0 1 1 0 0 0 11038 1421 11537 27448 19398 19398 1 0 0 NVVNLGNLVIESK NGAIRFHCDPTFWAKNVVNLGNLVIESKPA AKNVVNLGNLVIESKPAPGYTPNVVVGQVP K N V S K P 0 0 3 0 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 3 0 0 13 0 1397.7878 Q9UPN9 Q9UPN9 469 481 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 3.4577E-08 218.15 By MS/MS 4 0.816 1 1 1 3 1446300 1446300 0 11039 2852 11538 27449;27450;27451 19399 19399 1 38872 0 NVVSGGFPIIR IIGATFTDWFTSYVKNVVSGGFPIIRDQIF SYVKNVVSGGFPIIRDQIFRYVHDPECVAT K N V I R D 0 1 1 0 0 0 0 2 0 2 0 0 0 1 1 1 0 0 0 2 0 0 11 0 1157.6557 Q9UK99 Q9UK99 255 265 FBXO3 F-box only protein 3 yes yes 2 0.04693 77.533 By MS/MS 7 0 1 1 287290 287290 0 11040 2808 11539 27452 19400 19400 1 5133.9 0 NVVTVDELR GQGPVMENAQGLGFRNVVTVDELRMAFPLL QGLGFRNVVTVDELRMAFPLLDMVDLERRL R N V L R M 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 3 0 0 9 0 1043.5611 Q9BXW7 Q9BXW7 153 161 CECR5 Cat eye syndrome critical region protein 5 yes yes 2 5.822E-08 199.89 By MS/MS 7.5 0.5 1 1 2 63359000 63359000 0 11041 2404 11540 27453;27454 19401;19402 19401 2 1186200 0 NVVVVDGVR VQTKTKKTLAKPNIRNVVVVDGVRTPFLLS AKPNIRNVVVVDGVRTPFLLSGTSYKDLMP R N V V R T 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 5 0 0 9 0 955.54508 P55084 P55084 53 61 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.0020886 128.86 By MS/MS By matching 6.78 1.13 1 3 3 1 1 7 2 34262000 34168000 93779 11042 1027 11541 27455;27456;27457;27458;27459;27460;27461;27462;27463 19403;19404;19405 19403 3 554640 341380 NWINQTEAQTGQR DKVLSVHTDPVHLYKNWINQTEAQTGQRSH YKNWINQTEAQTGQRSHLPYDVTPEQALSH K N W Q R S 1 1 2 0 0 3 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 0 13 0 1544.7332 Q86VI3 Q86VI3 1081 1093 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 2 0.0099998 84.352 By MS/MS 3 0 1 1 171780 171780 0 11043 1827 11542 27464 19406 19406 0 4484.4 0 NWMAQNPMVLDK SKSMGRMQTYFRRIKNWMAQNPMVLDKSAF RIKNWMAQNPMVLDKSAFPDLEESDCYTGP K N W D K S 1 0 2 1 0 1 0 0 0 0 1 1 2 0 1 0 0 1 0 1 0 0 12 0 1445.6795 Q9BYT9 Q9BYT9 256 267 ANO3 Anoctamin-3 yes yes 2 0.015053 83.647 By MS/MS 5 0 1 1 704050 704050 0 11044 2418 11543 27465 19407 19407 1493 1 28939 0 NWQGGILSGGFEK STPTIVDADGRIYIRNWQGGILSGGFEKNP IRNWQGGILSGGFEKNPKPIFTEGKNQLEI R N W E K N 0 0 1 0 0 1 1 4 0 1 1 1 0 1 0 1 0 1 0 0 0 0 13 0 1391.6834 Q8NCN5 Q8NCN5 295 307 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 0.0010232 156.01 By MS/MS 4.5 0.5 1 1 2 679730 679730 0 11045 1955 11544 27466;27467 19408 19408 1 19836 0 NWQYQETIK DKVNEIVETNRPDSKNWQYQETIKKGDLLL NRPDSKNWQYQETIKKGDLLLNRVQKLSRV K N W I K K 0 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 1 1 1 0 0 0 9 0 1208.5826 Q15008 Q15008 363 371 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.001203 138.4 By MS/MS 6.5 0.5 1 1 2 5551100 5551100 0 11046 1460 11545 27468;27469 19409 19409 1 76029 0 NWQYQETIKK DKVNEIVETNRPDSKNWQYQETIKKGDLLL RPDSKNWQYQETIKKGDLLLNRVQKLSRVI K N W K K G 0 0 1 0 0 2 1 0 0 1 0 2 0 0 0 0 1 1 1 0 0 0 10 1 1336.6776 Q15008 Q15008 363 372 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.0024155 140.11 By MS/MS 6.5 0.5 1 1 2 2080700 2080700 0 11047 1460 11546 27470;27471 19410 19410 1 28875 0 NYAAALETFTEGQK STAMLRKGICEYHEKNYAAALETFTEGQKL KNYAAALETFTEGQKLDIETGFHRVGQAGL K N Y Q K L 3 0 1 0 0 1 2 1 0 0 1 1 0 1 0 0 2 0 1 0 0 0 14 0 1541.7362 Q9Y2Z0 Q9Y2Z0 94 107 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 5.6682E-06 212.68 By MS/MS 7.5 0.5 1 1 2 1582000 1582000 0 11048 2907 11547 27472;27473 19411 19411 1 33238 0 NYAHALDGLYR VRMQNDVKLPQGQRRNYAHALDGLYRVARE GQRRNYAHALDGLYRVAREEGLRRLFSGAT R N Y Y R V 2 1 1 1 0 0 0 1 1 0 2 0 0 0 0 0 0 0 2 0 0 0 11 0 1291.6309 Q9UBX3 Q9UBX3 140 150 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 0.001281 141.1 By MS/MS 6 3.56 2 2 2 6 9299200 9299200 0 11049 2761 11548 27474;27475;27476;27477;27478;27479 19412;19413;19414;19415;19416;19417 19413 6 772470 0 NYDIGAALDTIQYSK FSDEGGWLTRLLQTKNYDIGAALDTIQYSK NYDIGAALDTIQYSKHPPPL__________ K N Y S K H 2 0 1 2 0 1 0 1 0 2 1 1 0 0 0 1 1 0 2 0 0 0 15 0 1670.8152 Q13501 Q13501 421 435 SQSTM1 Sequestosome-1 yes yes 2 6.4995E-63 294.31 By MS/MS 6 0 1 1 2899800 2899800 0 11050 1375 11549 27480 19418 19418 1 22613 0 NYEEIAK DQLVILDMKHGVEAKNYEEIAKVEKLKPLE MKHGVEAKNYEEIAKVEKLKPLEVELRRLE K N Y A K V 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 865.41815 P49755 P49755 134 140 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 0.02153 122.18 By MS/MS 9 0 1 1 857850 857850 0 11051 930 11550 27481 19419 19419 1 492330 0 NYEEIAKVEK DQLVILDMKHGVEAKNYEEIAKVEKLKPLE GVEAKNYEEIAKVEKLKPLEVELRRLEDLS K N Y E K L 1 0 1 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 1 1 0 0 10 1 1221.6241 P49755 P49755 134 143 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 2 0.00081399 187.99 By MS/MS 9 0 1 1 1442700 1442700 0 11052 930 11551 27482 19420 19420 1 828000 0 NYGSYSTQASAAAATAELLK PSLQPSRKLSPTEPKNYGSYSTQASAAAAT STQASAAAATAELLKKQEELNRKAEELDRR K N Y L K K 6 0 1 0 0 1 1 1 0 0 2 1 0 0 0 3 2 0 2 0 0 0 20 0 2015.98 O14828 O14828 82 101 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 3.0532E-31 221.34 By MS/MS 8 0 1 1 474620 474620 0 11053 130 11552 27483 19421 19421 1 31310 0 NYHIFYR LLEKSRICVQGKEERNYHIFYRLCAGASED CVQGKEERNYHIFYRLCAGASEDIREKLHL R N Y Y R L 0 1 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 0 7 0 1011.4926 Q9UM54 Q9UM54 244 250 MYO6 Unconventional myosin-VI yes yes 2 0.050496 101.21 By MS/MS 3 0 1 1 387820 387820 0 11054 2833 11553 27484 19422 19422 1 10124 0 NYIAQNAIEAAER HVRVMHANNPKYVLRNYIAQNAIEAAERGD LRNYIAQNAIEAAERGDFSEVRRVLKLLET R N Y E R G 4 1 2 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 13 0 1461.7212 Q9BVL4 Q9BVL4 598 610 SELO Selenoprotein O yes yes 2 2.0704E-07 205.12 By MS/MS 5 0 1 1 1801900 1801900 0 11055 2380 11554 27485 19423 19423 1 74067 0 NYIQGINLVQAK EAKPVDKVKLIKEIKNYIQGINLVQAKKLV EIKNYIQGINLVQAKKLVESLPQEIKANVA K N Y A K K 1 0 2 0 0 2 0 1 0 2 1 1 0 0 0 0 0 0 1 1 0 0 12 0 1359.751 P52815 P52815 151 162 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 2 8.4096E-33 254.82 By MS/MS 9 0 1 1 4593500 4593500 0 11056 993 11555 27486 19424 19424 1 2636200 0 NYKSEEEFIHINNK LRGEGVKLQVMANSRNYKSEEEFIHINNKL RNYKSEEEFIHINNKLRRGDIIGVQGNPGK R N Y N K L 0 0 3 0 0 0 3 0 1 2 0 2 0 1 0 1 0 0 1 0 0 0 14 1 1763.8479 Q15046 Q15046 162 175 KARS Lysine--tRNA ligase yes yes 3 0.00051798 120.9 By MS/MS 5 0 1 1 965640 965640 0 11057 1471 11556 27487 19425 19425 1 39692 0 NYLEGIYNVPVAAVR VQFRIPMEMTRVDLRNYLEGIYNVPVAAVR NYLEGIYNVPVAAVRTRVQHGSNKRRDHRN R N Y V R T 2 1 2 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 2 3 0 0 15 0 1676.8886 Q16540 Q16540 55 69 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2 1.3755E-14 208.08 By MS/MS 10 0 1 1 422590 422590 0 11058 1538 11557 27488 19426 19426 1 449170 0 NYLEPGK LPVILMDETLKFVARNYLEPGKECVQPATK ETLKFVARNYLEPGKECVQPATKSCSFSAC R N Y G K E 0 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 7 0 819.41267 P16615 P16615 989 995 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.027209 116.88 By MS/MS 3 0.816 1 1 1 3 933290 933290 0 11059 608 11558 27489;27490;27491 19427 19427 1 32850 0 NYLEPGKECVQPATK LPVILMDETLKFVARNYLEPGKECVQPATK NYLEPGKECVQPATKSCSFSACTDGISWPF R N Y T K S 1 0 1 0 1 1 2 1 0 0 1 2 0 0 2 0 1 0 1 1 0 0 15 1 1732.8454 P16615 P16615 989 1003 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 0.0035064 147.96 By MS/MS 2.78 1.31 2 2 2 2 1 9 17535000 17535000 0 11060 608 11559 27492;27493;27494;27495;27496;27497;27498;27499;27500 19428;19429;19430;19431;19432;19433;19434 19433 7 644060 0 NYLHYSLYDQAEK HDADGQATLLNLLLRNYLHYSLYDQAEKLV LRNYLHYSLYDQAEKLVSKSVFPEQANNNE R N Y E K L 1 0 1 1 0 1 1 0 1 0 2 1 0 0 0 1 0 0 3 0 0 0 13 0 1642.7627 O43242 O43242 257 269 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 2.5435E-25 240.8 By MS/MS 6 0 1 1 9707400 9707400 0 11061 187 11560 27501 19435 19435 1 75699 0 NYLQSLPSK PSQEDLNCIINMKARNYLQSLPSKTKVAWA INMKARNYLQSLPSKTKVAWAKLFPKSDSK R N Y S K T 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 1 0 0 0 9 0 1048.5553 P27361 P27361 279 287 MAPK3 Mitogen-activated protein kinase 3 yes yes 2 0.00043363 174.02 By MS/MS 7 0 1 1 786670 786670 0 11062 704 11561 27502 19436 19436 1 14058 0 NYMSNPSYNYEIVNR SAEEISDAIREKMKKNYMSNPSYNYEIVNR NYMSNPSYNYEIVNRASLACGPMVKWAIAQ K N Y N R A 0 1 4 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 3 1 0 0 15 0 1862.8257 Q14204 Q14204 3370 3384 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.8072E-38 253.97 By MS/MS 1.5 0.5 1 1 2 849170 849170 0 11063 1421 11562 27503;27504 19437 19437 1112 1 41626 0 NYNKPWEPK TNYHLPPSPKPMKMKNYNKPWEPKWTKICS KPMKMKNYNKPWEPKWTKICSLHSLPPQS_ K N Y P K W 0 0 2 0 0 0 1 0 0 0 0 2 0 0 2 0 0 1 1 0 0 0 9 1 1174.5771 P03928 P03928 46 54 MT-ATP8 ATP synthase protein 8 yes yes 3 0.046223 73.985 By MS/MS 10 0 1 1 519590 519590 0 11064 440 11563 27505 19438 19438 1 552270 0 NYSPYYNTIDDLK IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ QKNYSPYYNTIDDLKDQIVDLTVGNNKTLL K N Y L K D 0 0 2 2 0 0 0 0 0 1 1 1 0 0 1 1 1 0 3 0 0 0 13 0 1604.7359 P35527;CON__P35527 P35527 200 212 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.031156 78.655 By matching By MS/MS 3 0 2 1 1 227650 153210 74441 + 11065 791 11564 27506;27507 19439 19439 1 3999.5 106690 NYTDEAIETDDLTIK AIGRGAKSVREFLEKNYTDEAIETDDLTIK NYTDEAIETDDLTIKLVIKALLEVVQSGGK K N Y I K L 1 0 1 3 0 0 2 0 0 2 1 1 0 0 0 0 3 0 1 0 0 0 15 0 1739.8101 O14818 O14818 175 189 PSMA7 Proteasome subunit alpha type-7 yes yes 2 2.1931E-127 373.82 By MS/MS 8.5 0.5 1 1 2 3512600 3512600 0 11066 129 11565 27508;27509 19440 19440 1 279230 0 NYTDNELEK VPFGGAKAGVKINPKNYTDNELEKITRRFT VKINPKNYTDNELEKITRRFTMELAKKGFI K N Y E K I 0 0 2 1 0 0 2 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 0 1124.4986 P00367 P00367 192 200 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2 0.00154 134.77 By MS/MS By matching 6.75 0.829 2 1 1 3 1 7148100 7117600 30525 11067 425 11566 27510;27511;27512;27513 19441 19441 1 64314 93618 NYTDNELEKITR VPFGGAKAGVKINPKNYTDNELEKITRRFT NPKNYTDNELEKITRRFTMELAKKGFIGPG K N Y T R R 0 1 2 1 0 0 2 0 0 1 1 1 0 0 0 0 2 0 1 0 0 0 12 1 1494.7314 P00367 P00367 192 203 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2 2.4058E-07 168.22 By MS/MS 6 0 1 1 3114300 3114300 0 11068 425 11567 27514 19442 19442 0 24285 0 NYVEVTR KLLPVLVHTFWIDTKNYVEVTRKWYAEAMP HTFWIDTKNYVEVTRKWYAEAMPFPLNFFL K N Y T R K 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 7 0 879.44503 Q13505 Q13505 267 273 MTX1 Metaxin-1 yes yes 2 0.028126 116.25 By MS/MS 8 0 1 1 797100 797100 0 11069 1376 11568 27515 19443 19443 1 52585 0 PAAPPAPGPGQLTLR LTGFGGYDKVKLQSRPAAPPAPGPGQLTLR PAAPPAPGPGQLTLRLRACGLNFADLMARQ R P A L R L 3 1 0 0 0 1 0 2 0 0 2 0 0 0 5 0 1 0 0 0 0 0 15 0 1441.8041 Q99536 Q99536 68 82 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 2 0.0025283 113.38 By MS/MS 6.5 0.5 1 1 2 7205600 7205600 0 11070 2272 11569 27516;27517 19444 19444 1 78963 0 PAEPPAWAGGAR VAVGKPRAGGDAEPRPAEPPAWAGGARPGP EPRPAEPPAWAGGARPGPGVWDPNWDRREP R P A A R P 4 1 0 0 0 0 1 2 0 0 0 0 0 0 3 0 0 1 0 0 0 0 12 0 1178.5833 Q96HS1 Q96HS1 41 52 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.0033378 114.4 By MS/MS 8.5 0.5 1 1 2 5467500 5467500 0 11071 2196 11570 27518;27519 19445 19445 1 510210 0 PAGDGTFQK DGEDQTQDTELVETRPAGDGTFQKWAAVVV ELVETRPAGDGTFQKWAAVVVPSGQEQRYT R P A Q K W 1 0 0 1 0 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 0 0 9 0 919.43995 P04439;P30511;P17693;P10321;P01893;P13747 P10321 259 267 HLA-A;HLA-F;HLA-G;HLA-C;HLA-H;HLA-E HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, alpha chain F;HLA class I histocompatibility antigen, alpha chain G;HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, alpha chain E no no 2 0.00034853 156.75 By MS/MS 7 0 1 1 704900 704900 0 11072 536;453 11571 27520 19446 19446 1 12597 0 PAGGPKPPSGK AAVTVLRVDQIIMAKPAGGPKPPSGKKDWD IMAKPAGGPKPPSGKKDWDDDQND______ K P A G K K 1 0 0 0 0 0 0 3 0 0 0 2 0 0 4 1 0 0 0 0 0 0 11 1 991.54508 P50990 P50990 529 539 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.0082543 125.74 By MS/MS By matching 5.33 2.21 1 1 1 3 2 1 8 1 120950000 120940000 8344.2 11073 955 11572 27521;27522;27523;27524;27525;27526;27527;27528;27529 19447;19448;19449;19450;19451 19449 5 1017200 25591 PALELLEPIEQK VSTTVETKEPEKEIRPALELLEPIEQKFVS EIRPALELLEPIEQKFVSISDLLVPKDLGT R P A Q K F 1 0 0 0 0 1 3 0 0 1 3 1 0 0 2 0 0 0 0 0 0 0 12 0 1378.7708 P50395 P50395 368 379 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 0.00014765 155.11 By MS/MS 6.5 0.5 1 1 2 457040 457040 0 11074 944 11573 27530;27531 19452 19452 1 6434.3 0 PALETEGLR ______________________________ ESLSARPALETEGLRFLHTTVGSLLATYGW R P A L R F 1 1 0 0 0 0 2 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 0 984.52401 Q9BQE4 Q9BQE4 12 20 VIMP Selenoprotein S yes yes 2 0.0010958 139.97 By MS/MS 9 0 1 1 589420 589420 0 11075 2315 11574 27532 19453 19453 1 338270 0 PANFLDLGGGVK LAMATCDIIFLNGGKPANFLDLGGGVKEAQ GGKPANFLDLGGGVKEAQVYQAFKLLTADP K P A V K E 1 0 1 1 0 0 0 3 0 0 2 1 0 1 1 0 0 0 0 1 0 0 12 0 1186.6346 Q96I99 Q96I99 327 338 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 2 8.6833E-05 157.97 By MS/MS 7 0 1 1 1048800 1048800 0 11076 2200 11575 27533 19454 19454 1 18743 0 PAQDISLPLSAR QLMRYQHPPEYGAARPAQDISLPLSARNSQ AARPAQDISLPLSARNSQPHSPTSSLTSGG R P A A R N 2 1 0 1 0 1 0 0 0 1 2 0 0 0 2 2 0 0 0 0 0 0 12 0 1266.6932 Q4VCS5 Q4VCS5 292 303 AMOT Angiomotin yes yes 2 0.043098 91.313 By MS/MS 3 0 1 1 865980 865980 0 11077 1580 11576 27534 19455 19455 1 22607 0 PASAAVLVPLCSVR CRRLLAGATARLRARPASAAVLVPLCSVRG RPASAAVLVPLCSVRGVPALLYTLRSSRLT R P A V R G 3 1 0 0 1 0 0 0 0 0 2 0 0 0 2 2 0 0 0 3 0 0 14 0 1438.7966 Q8WV74 Q8WV74 29 42 NUDT8 Nucleoside diphosphate-linked moiety X motif 8, mitochondrial yes yes 2 0.0088268 120.06 By MS/MS 8.5 0.5 1 1 2 264740 264740 0 11078 2025 11577 27535;27536 19456 19456 1 112480 0 PASESPHHHTAPAK IRPDAPSRCTWQLGRPASESPHHHTAPAKS RPASESPHHHTAPAKSPKILPDILKKIGDT R P A A K S 3 0 0 0 0 0 1 0 3 0 0 1 0 0 3 2 1 0 0 0 0 0 14 0 1465.7062 P0DN79;P35520 P0DN79 59 72 CBS Cystathionine beta-synthase yes no 3 0.00054151 143.31 By MS/MS 5.5 0.5 1 1 2 1148300 1148300 0 11079 530 11578 27537;27538 19457 19457 1 11318 0 PATSTLNR GSGAKPSDAASEAARPATSTLNRFSALQQA AASEAARPATSTLNRFSALQQAVPTESTDN R P A N R F 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 1 2 0 0 0 0 0 8 0 858.45593 Q04637 Q04637 1115 1122 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0028217 151.29 By MS/MS 2 0 1 1 6620000 6620000 0 11080 1264 11579 27539 19458 19458 1 329050 0 PAVAILSFK CIPCKGSRFPPTLPRPAVAILSFKLPYCQI PPTLPRPAVAILSFKLPYCQIATEKGQMEE R P A F K L 2 0 0 0 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 9 0 944.5695 O75717 O75717 704 712 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0055602 114.5 By MS/MS 3 0 1 1 227680 227680 0 11081 325 11580 27540 19459 19459 1 5943.7 0 PAVLSGYFK PVVHETEPESGSQPRPAVLSGYFKQFQKSL SGSQPRPAVLSGYFKQFQKSLPPRFQRQQE R P A F K Q 1 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 1 1 0 0 9 0 980.53312 Q9Y520 Q9Y520 657 665 PRRC2C Protein PRRC2C yes yes 2 0.021459 95.909 By MS/MS 1.5 0.5 1 1 2 214180 214180 0 11082 2963 11581 27541;27542 19460 19460 1 10500 0 PAYFQRPENALK ______________________________ ______________________________ M P A L K R 2 1 1 0 0 1 1 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 12 1 1432.7463 Q14152 Q14152 2 13 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0011084 155 By MS/MS 3.75 0.829 2 1 1 4 12086000 12086000 0 11083 1409 11582 27543;27544;27545;27546 19461;19462 19462 2 321120 0 PCLVMTMIDEVFLPGK P C G K 0 0 0 1 1 0 1 1 0 1 2 1 2 1 2 0 1 0 0 2 0 0 16 0 1848.9188 REV__A8MTZ0 yes yes 2 0.032898 65.719 By MS/MS 5 0 1 1 5196000 5196000 0 + 11084 3016 11583 27547 19463 19463 1737 1 213580 0 PDNFVFGQSGAGNNWAK TMDSVRSGPFGQIFRPDNFVFGQSGAGNNW NFVFGQSGAGNNWAKGHYTEGAELVDSVLD R P D A K G 2 0 3 1 0 1 0 3 0 0 0 1 0 2 1 1 0 1 0 1 0 0 17 0 1807.8278 P07437;P68371;Q13885;Q9BVA1;P04350 P68371 87 103 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 2 7.4591E-25 217.46 By MS/MS 6 0 1 1 9245300 9245300 0 11085 1187;490;1400;2375;451 11584 27548 19464 19464 1 72095 0 PDYLGADQR ______________________________ ______________________________ M P D Q R K 1 1 0 2 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 9 0 1033.4829 P35998 P35998 2 10 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.010507 103.7 By MS/MS By matching 7.33 0.471 2 1 2 1 1944000 1913300 30676 11086 801 11585 27549;27550;27551 19465 19465 1 44210 125930 PEFLEDPSVLTK ______________________________ ______________________________ M P E T K D 0 0 0 1 0 0 2 0 0 0 2 1 0 1 2 1 1 0 0 1 0 0 12 0 1373.7078 P42166;P42167 P42167 2 13 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 1.0842E-07 192.38 By MS/MS By MS/MS 6 0.707 1 2 1 3 1 11138000 11090000 48194 11087 846;845 11586 27552;27553;27554;27555 19466;19467;19468;19469;19470 19469 5 135190 147810 PELAVQK ______________________________ ______________________________ M P E Q K V 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 7 0 783.44905 P51665 P51665 2 8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 0.022086 120.65 By MS/MS By matching 7 0 2 1 1 8303700 8285200 18463 11088 975 11587 27556;27557 19471 19471 1 148060 75794 PENVAPR ______________________________ ______________________________ M P E P R S 1 1 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 7 0 781.40825 P50991 P50991 2 8 CCT4 T-complex protein 1 subunit delta yes yes 2 0.010104 153.73 By MS/MS 6.57 2.77 1 1 1 1 1 1 1 7 124890000 124890000 0 11089 956 11588 27558;27559;27560;27561;27562;27563;27564 19472;19473;19474;19475 19473 4 3748700 0 PFLDLSHPR AKYLATVVGYLVVSRPFLDLSHPRHLKSTH YLVVSRPFLDLSHPRHLKSTHSELLEDYYQ R P F P R H 0 1 0 1 0 0 0 0 1 0 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1080.5716 P28288 P28288 336 344 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 3 0.002388 118.18 By MS/MS 5.5 0.5 1 1 2 1482800 1482800 0 11090 716 11589 27565;27566 19476 19476 1 37493 0 PFQEYLEAQR AFIGAVPGIGPSLQKPFQEYLEAQRQKLHH PSLQKPFQEYLEAQRQKLHHKSEMGTPQGE K P F Q R Q 1 1 0 0 0 2 2 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 10 0 1279.6197 Q96GC9 Q96GC9 337 346 VMP1 Vacuole membrane protein 1 yes yes 2 0.00078397 132.88 By MS/MS 4 3 1 1 2 703420 703420 0 11091 2180 11590 27567;27568 19477;19478 19477 2 17182 0 PFSNSHNALK ______________________________ ______________________________ M P F L K L 1 0 2 0 0 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1113.5567 P12277 P12277 2 11 CKB Creatine kinase B-type yes yes 2;3 0.00015166 159.79 By MS/MS By matching 7 0 3 2 1 5269900 5251200 18686 11092 565 11591 27569;27570;27571 19479;19480 19480 2 93841 76711 PGAFDLEQVKR LEASQLKETLQAVPKPGAFDLEQVKRSTYF AVPKPGAFDLEQVKRSTYFFS_________ K P G K R S 1 1 0 1 0 1 1 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 11 1 1258.667 O00411 O00411 1214 1224 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.046017 64.374 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 3236900 0 3236900 11093 92 11592 27572;27573;27574;27575;27576;27577;27578;27579 19481;19482 19482 0 0 5245800 PGASDLTGSFR IISRGANFLTQILLRPGASDLTGSFRLYRK ILLRPGASDLTGSFRLYRKEVLEKLIEKCV R P G F R L 1 1 0 1 0 0 0 2 0 0 1 0 0 1 1 2 1 0 0 0 0 0 11 0 1106.5356 O60762 O60762 178 188 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.00049419 142.98 By MS/MS 8.5 0.5 1 1 2 2659400 2659400 0 11094 263 11593 27580;27581 19483 19483 1 218120 0 PGASLPPLDLQALEK FRSKVLKDLPRVEGRPGASLPPLDLQALEK PGASLPPLDLQALEKELVDRHGEEVTPEDV R P G E K E 2 0 0 1 0 1 1 1 0 0 4 1 0 0 3 1 0 0 0 0 0 0 15 0 1547.8559 P11498 P11498 978 992 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0010418 118.76 By MS/MS 4 0 1 1 584580 584580 0 11095 555 11594 27582 19484 19484 1 15959 0 PGFSIADK SIGIYGLDFYVVLGRPGFSIADKKRRTGCI FYVVLGRPGFSIADKKRRTGCIGAKHRISK R P G D K K 1 0 0 1 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 8 0 833.42832 P62913 P62913 137 144 RPL11 60S ribosomal protein L11 yes yes 2 0.0020118 157.33 By MS/MS 9 0 1 1 335540 335540 0 11096 1161 11595 27583 19485 19485 1 192570 0 PGHLQEGFGCVVTNR ______________________________ PGHLQEGFGCVVTNRFDQLFDDESDPFEVL M P G N R F 0 1 1 0 1 1 1 3 1 0 1 0 0 1 1 0 1 0 0 2 0 0 15 0 1669.7995 Q8NC51 Q8NC51 2 16 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 8.4865E-06 149.82 By MS/MS 6 0 2 2 5572100 5572100 0 11097 1949 11596 27584;27585 19486;19487 19487 2 43452 0 PGIGATHSSR LGEFSITYKPVKHGRPGIGATHSSRFIPLK VKHGRPGIGATHSSRFIPLK__________ R P G S R F 1 1 0 0 0 0 0 2 1 1 0 0 0 0 1 2 1 0 0 0 0 0 10 0 981.49919 P62841 P62841 131 140 RPS15 40S ribosomal protein S15 yes yes 2;3 0.00097847 123.86 By MS/MS By matching 9.6 0.49 2 3 4 1 2733700 2723000 10693 11098 1148 11597 27586;27587;27588;27589;27590 19488;19489;19490 19489 3 1777900 274270 PGIVELPTLEELK ______________________________ ______________________________ M P G L K V 0 0 0 0 0 0 3 1 0 1 3 1 0 0 2 0 1 0 0 1 0 0 13 0 1436.8126 P51970 P51970 2 14 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2 0.010717 94.363 By MS/MS 9.5 0.5 1 1 2 458210 458210 0 11099 980 11598 27591;27592 19491;19492 19491 2 303210 0 PGPGVWDPNWDR EPRPAEPPAWAGGARPGPGVWDPNWDRREP GARPGPGVWDPNWDRREPLSLINVRKRNVE R P G D R R 0 1 1 2 0 0 0 2 0 0 0 0 0 0 3 0 0 2 0 1 0 0 12 0 1394.6367 Q96HS1 Q96HS1 53 64 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.010804 96.113 By MS/MS 9 0.816 1 1 1 3 3438700 3438700 0 11100 2196 11599 27593;27594;27595 19493;19494 19493 2 489110 0 PGPTPSGTNVGSSGR ______________________________ PGPTPSGTNVGSSGRSPSKAVAARAAGSTV M P G G R S 0 1 1 0 0 0 0 4 0 0 0 0 0 0 3 3 2 0 0 1 0 0 15 0 1369.6586 P60468 P60468 2 16 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 5.4902E-07 158.86 By MS/MS By matching 10 0 2 1 1 6054700 6001200 53500 11101 1066 11600 27596;27597 19495 19495 1 6378700 1372300 PGSFFTR QRAGRDYAVFERAPRPGSFFTRYPRHRKLI AVFERAPRPGSFFTRYPRHRKLISINKRYT R P G T R Y 0 1 0 0 0 0 0 1 0 0 0 0 0 2 1 1 1 0 0 0 0 0 7 0 810.40244 Q8IWF2 Q8IWF2 65 71 FOXRED2 FAD-dependent oxidoreductase domain-containing protein 2 yes yes 2 0.010498 152.63 By MS/MS 5 0 1 1 642540 642540 0 11102 1865 11601 27598 19496 19496 1 26411 0 PGSIDSNNQLFAPGGR GSRPIDTSRLTKITKPGSIDSNNQLFAPGG GSIDSNNQLFAPGGRLSWGKGSSGGSGAKP K P G G R L 1 1 2 1 0 1 0 3 0 1 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1628.7907 Q04637 Q04637 1075 1090 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 4.2879E-15 210.15 By MS/MS 2 0 1 1 521670 521670 0 11103 1264 11602 27599 19497 19497 1 25930 0 PGSIKPHQK GLKREDLRRGLVMVKPGSIKPHQKVEAQVY GLVMVKPGSIKPHQKVEAQVYILSKEEGGR K P G Q K V 0 0 0 0 0 1 0 1 1 1 0 2 0 0 2 1 0 0 0 0 0 0 9 1 990.56106 P49411 P49411 343 351 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 0.0091152 138.06 By MS/MS 7.2 0.748 1 2 2 5 7449900 7449900 0 11104 918 11603 27600;27601;27602;27603;27604 19498;19499;19500 19499 3 148200 0 PGSTPSRPSSAK NSPTAGAAKSSPAAKPGSTPSRPSSAKRAS AAKPGSTPSRPSSAKRASSSGSASKSDKDL K P G A K R 1 1 0 0 0 0 0 1 0 0 0 1 0 0 3 4 1 0 0 0 0 0 12 1 1170.5993 Q15555 Q15555 214 225 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.011675 126.71 By MS/MS 8 0.816 1 1 1 3 920890 920890 0 11105 1508 11604 27605;27606;27607 19501 19501 1 25432 0 PGSVAYVSR TGGMLDNILASKLYRPGSVAYVSRSGGMSN ASKLYRPGSVAYVSRSGGMSNELNNIISRT R P G S R S 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 2 0 0 1 2 0 0 9 0 934.48723 P53396 P53396 654 662 ACLY ATP-citrate synthase yes yes 2 0.0013205 137.13 By MS/MS 4 0 1 1 442170 442170 0 11106 1001 11605 27608 19502 19502 1 12071 0 PGVAQPEDTVQFR QLRVFRTNFFIQLVRPGVAQPEDTVQFRIP VRPGVAQPEDTVQFRIPMEMTRVDLRNYLE R P G F R I 1 1 0 1 0 2 1 1 0 0 0 0 0 1 2 0 1 0 0 2 0 0 13 0 1442.7154 Q16540 Q16540 31 43 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2 0.0045036 122.42 By MS/MS 10 0 1 1 404000 404000 0 11107 1538 11606 27609 19503 19503 1 429410 0 PGVFDLINK ALYKQATEGPCNMPKPGVFDLINKAKWDAW PCNMPKPGVFDLINKAKWDAWNALGSLPKE K P G N K A 0 0 1 1 0 0 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 9 0 1001.5546 O75521 O75521 82 90 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 2 0.0025322 124.08 By MS/MS 7 0 1 1 243230 243230 0 11108 314 11607 27610 19504 19504 1 4346.6 0 PIFLGTVDPR DPSLLFVNAGMNQFKPIFLGTVDPRSEMAG MNQFKPIFLGTVDPRSEMAGFRRVANSQKC K P I P R S 0 1 0 1 0 0 0 1 0 1 1 0 0 1 2 0 1 0 0 1 0 0 10 0 1113.6182 Q5JTZ9 Q5JTZ9 84 93 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.026011 88.177 By MS/MS 4 0 1 1 367340 367340 0 11109 1611 11608 27611 19505 19505 1 10028 0 PIGEQEEEEYETK VTSQLPQVPAGAGSRPIGEQEEEEYETKGG SRPIGEQEEEEYETKGGRRRTWDDDYVLKR R P I T K G 0 0 0 0 0 1 6 1 0 1 0 1 0 0 1 0 1 0 1 0 0 0 13 0 1579.689 Q9ULT8 Q9ULT8 1742 1754 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 2.0814E-07 177.83 By MS/MS 1.5 0.5 1 1 2 454450 454450 0 11110 2826 11609 27612;27613 19506 19506 1 22545 0 PIGPKPTK GGLLLNCCVAGALMRPIGPKPTKAGKDKSK VAGALMRPIGPKPTKAGKDKSKASLEKAGK R P I T K A 0 0 0 0 0 0 0 1 0 1 0 2 0 0 3 0 1 0 0 0 0 0 8 1 836.51199 P53985 P53985 197 204 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.041478 134.81 By MS/MS 2.5 1.12 1 1 1 1 4 624420 624420 0 11111 1008 11610 27614;27615;27616;27617 19507 19507 1 28115 0 PIIFDCR VVGEGTHFLIPWVQKPIIFDCRSRPRNVPV FLIPWVQKPIIFDCRSRPRNVPVITGSKDL K P I C R S 0 1 0 1 1 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 7 0 919.45857 P35232 P35232 64 70 PHB Prohibitin yes yes 2 0.036253 110.63 By MS/MS 8 0 1 1 709340 709340 0 11112 782 11611 27618 19508 19508 1 46795 0 PLAKDLLHPSPEEEK ______________________________ PLAKDLLHPSPEEEKRKHKKKRLVQSPNSY M P L E K R 1 0 0 1 0 0 3 0 1 0 3 2 0 0 3 1 0 0 0 0 0 0 15 1 1701.8938 P42677 P42677 2 16 RPS27 40S ribosomal protein S27 yes yes 3;4 0.014355 97.223 By MS/MS 10 0 2 2 1157600 1157600 0 11113 852 11612 27619;27620 19509;19510 19510 2 1230400 0 PLELSDFR ISASCRRPIKGAAGRPLELSDFRMEESFSS IKGAAGRPLELSDFRMEESFSSKYVPKYVP R P L F R M 0 1 0 1 0 0 1 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 8 0 975.50255 P42167 P42167 374 381 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 0.021256 105.14 By MS/MS 6.5 0.5 1 1 2 1852200 1852200 0 11114 846 11613 27621;27622 19511 19511 1 16822 0 PLEMIEPR AHCKRGNGLIKVNGRPLEMIEPRTLQYKLL LIKVNGRPLEMIEPRTLQYKLLEPVLLLGK R P L P R T 0 1 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 0 8 0 983.511 P62249 P62249 38 45 RPS16 40S ribosomal protein S16 yes yes 2 0.012293 116.73 By MS/MS 10 0 1 1 282700 282700 0 11115 1120 11614 27623 19512 19512 1 300480 0 PLENLEEEGLPK ______________________________ ______________________________ M P L P K N 0 0 1 0 0 0 4 1 0 0 3 1 0 0 2 0 0 0 0 0 0 0 12 0 1366.698 Q15008 Q15008 2 13 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 5.5108E-11 203.03 By MS/MS 7 0 1 1 1530600 1530600 0 11116 1460 11615 27624 19513 19513 1 27352 0 PLENLEEEGLPKNPDLR ______________________________ ENLEEEGLPKNPDLRIAQLRFLLSLPEHRG M P L L R I 0 1 2 1 0 0 4 1 0 0 4 1 0 0 3 0 0 0 0 0 0 0 17 1 1962.0058 Q15008 Q15008 2 18 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2;3 1.0671E-32 278.62 By MS/MS 6.67 0.471 1 2 3 28766000 28766000 0 11117 1460 11616 27625;27626;27627 19514;19515;19516 19516 3 468420 0 PLFLAPDFDR KVSQWWERLTKQEKRPLFLAPDFDRWLDES KQEKRPLFLAPDFDRWLDESDAEMELRAKE R P L D R W 1 1 0 2 0 0 0 0 0 0 2 0 0 2 2 0 0 0 0 0 0 0 10 0 1189.6132 Q9P035 Q9P035 100 109 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.03113 84.615 By MS/MS 1.5 0.5 1 1 2 136220 136220 0 11118 2723 11617 27628;27629 19517 19517 1 6677.3 0 PLFLEFPK TLFHQAHVAGETVARPLFLEFPKDSSTWTV AGETVARPLFLEFPKDSSTWTVDHQLLWGE R P L P K D 0 0 0 0 0 0 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 0 8 0 989.5586 P10253 P10253 726 733 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 2 0.017601 109.86 By MS/MS 3.5 0.5 1 1 2 212120 212120 0 11119 535 11618 27630;27631 19518 19518 1 5776.8 0 PLFPGNDVDDQLK WSAGCIFAELANAGRPLFPGNDVDDQLKRI GRPLFPGNDVDDQLKRIFRLLGTPTEEQWP R P L L K R 0 0 1 3 0 1 0 1 0 0 2 1 0 1 2 0 0 0 0 1 0 0 13 0 1456.7198 Q00535 Q00535 201 213 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.0093905 92.112 By MS/MS 8 0 1 1 902390 902390 0 11120 1233 11619 27632 19519 19519 1 59530 0 PLFTANPFEQDVEK ______________________________ MPLFTANPFEQDVEKATNEYNTTEDWSLIM M P L E K A 1 0 1 1 0 1 2 0 0 0 1 1 0 2 2 0 1 0 0 1 0 0 14 0 1633.7988 O75886 O75886 2 15 STAM2 Signal transducing adapter molecule 2 yes yes 2 1.9972E-05 193.28 By MS/MS 5 0 1 1 403720 403720 0 11121 335 11620 27633 19520 19520 1 16595 0 PLLLQLPIGEAK FKYAVESIREKLKAKPLLLQLPIGEAKTFK KAKPLLLQLPIGEAKTFKGVVDVVMKEKLL K P L A K T 1 0 0 0 0 1 1 1 0 1 4 1 0 0 2 0 0 0 0 0 0 0 12 0 1290.7911 Q969S9 Q969S9 219 230 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.00046599 140.16 By MS/MS 5.5 0.5 1 1 2 515020 515020 0 11122 2107 11621 27634;27635 19521 19521 1 10711 0 PLTESQIQVVCK CAGGAVDAVMLELERPLTESQIQVVCKQTL LERPLTESQIQVVCKQTLDALNYLHDNKII R P L C K Q 0 0 0 0 1 2 1 0 0 1 1 1 0 0 1 1 1 0 0 2 0 0 12 0 1400.7334 Q9H2G2 Q9H2G2 126 137 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.01678 108.9 By MS/MS 2 0 1 1 65443 65443 0 11123 2476 11622 27636 19522 19522 1 3252.9 0 PLVALLDGR EGIRPQIMNGPLHPRPLVALLDGRDCTVEM GPLHPRPLVALLDGRDCTVEMPILKDLATV R P L G R D 1 1 0 1 0 0 0 1 0 0 3 0 0 0 1 0 0 0 0 1 0 0 9 0 952.57057 P56545;Q13363 P56545 34 42 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 2 0.0018839 131.06 By MS/MS 6.67 0.471 1 2 3 4889500 4889500 0 11124 1047;1360 11623 27637;27638;27639 19523;19524 19523 2 73067 0 PLVETIFER DDSAPNEMVYRFTARPLVETIFERGMATCF YRFTARPLVETIFERGMATCFAYGQTGSGK R P L E R G 0 1 0 0 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 9 0 1102.6023 O00139 O00139 296 304 KIF2A Kinesin-like protein KIF2A yes yes 2 0.0016822 133.23 By MS/MS 4 0 1 1 235930 235930 0 11125 69 11624 27640 19525 19525 1 6440.7 0 PLYEGLGSGGEK ______________________________ ______________________________ M P L E K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 0 1205.5928 Q9NZ32 Q9NZ32 2 13 ACTR10 Actin-related protein 10 yes yes 2 0.0031703 115.23 By MS/MS 7 0 1 1 1735200 1735200 0 11126 2704 11625 27641 19526 19526 1 31008 0 PMFIVNTNVPR ______________________________ ______________________________ M P M P R A 0 1 2 0 0 0 0 0 0 1 0 0 1 1 2 0 1 0 0 2 0 0 11 0 1286.6805 P14174 P14174 2 12 MIF Macrophage migration inhibitory factor yes yes 2 5.9369E-11 204.79 By MS/MS By MS/MS 10 0 3 2 1 6667100 6599800 67266 11127 586 11626;11627 27642;27643;27644 19527;19528;19529 19528 376 3 7014900 1725300 PMPLSARGNSR ENGLTVRLQTFLSKRPMPLSARGNSRLNIW LSKRPMPLSARGNSRLNIWGEARVGSELCA R P M S R L 1 2 1 0 0 0 0 1 0 0 1 0 1 0 2 2 0 0 0 0 0 0 11 1 1184.6084 Q12789 Q12789 1164 1174 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.049953 69.812 By MS/MS 5 0 1 1 0 0 0 11128 1306 11628 27645 19530 19530 1 0 0 PPYTVVYFPVR ______________________________ ______________________________ M P P V R G 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 1 0 2 3 0 0 11 0 1336.718 P09211 P09211 2 12 GSTP1 Glutathione S-transferase P yes yes 2 0.0018495 122.28 By MS/MS 9 0 1 1 156770 156770 0 11129 513 11629 27646 19531 19531 1 89974 0 PQAPATVGLAFR GKTLGECGFTSQTARPQAPATVGLAFRADD TARPQAPATVGLAFRADDTFEALCIEPFSS R P Q F R A 3 1 0 0 0 1 0 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 12 0 1226.6772 Q15370 Q15370 69 80 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 0.035017 79.036 By MS/MS 10 0 1 1 645560 645560 0 11130 1492 11630 27647 19532 19532 1 686160 0 PQYQTWEEFSR ______________________________ ______________________________ M P Q S R A 0 1 0 0 0 2 2 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 11 0 1469.6575 P49458 P49458 2 12 SRP9 Signal recognition particle 9 kDa protein yes yes 2 1.3871E-10 199.03 By MS/MS 10 0 1 1 447720 447720 0 11131 919 11631 27648 19533 19533 1 475880 0 PRPPTLLSQEQIK LQKNNKDRFCQLLWRPRPPTLLSQEQIKQI WRPRPPTLLSQEQIKQIKKDLKKYSKIFEQ R P R I K Q 0 1 0 0 0 2 1 0 0 1 2 1 0 0 3 1 1 0 0 0 0 0 13 1 1505.8566 P55884 P55884 706 718 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.0071189 87.831 By MS/MS 3.5 0.5 1 1 2 3346700 3346700 0 11132 1040 11632 27649;27650 19534 19534 1 91075 0 PSAIQQR SESLLRGIYAYGFEKPSAIQQRAILPCIKG IYAYGFEKPSAIQQRAILPCIKGYDVIAQA K P S Q R A 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 7 0 798.4348 P60842;Q14240;P38919 P60842 55 61 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 0.00075902 195.85 By MS/MS 5.57 2.77 1 1 2 1 1 1 7 23026000 23026000 0 11133 1074;821 11633 27651;27652;27653;27654;27655;27656;27657 19535;19536;19537;19538 19538 4 417170 0 PSDAASEAAR RLSWGKGSSGGSGAKPSDAASEAARPATST GSGAKPSDAASEAARPATSTLNRFSALQQA K P S A R P 4 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 10 0 973.44649 Q04637 Q04637 1105 1114 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 1.7143E-28 253.05 By MS/MS 2 0 1 1 2227000 2227000 0 11134 1264 11634 27658 19539 19539 1 110690 0 PSDAASEAARPATSTLNR RLSWGKGSSGGSGAKPSDAASEAARPATST AASEAARPATSTLNRFSALQQAVPTESTDN K P S N R F 5 2 1 1 0 0 1 0 0 0 1 0 0 0 2 3 2 0 0 0 0 0 18 1 1813.8919 Q04637 Q04637 1105 1122 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.012768 69.485 By MS/MS 2.5 1.12 1 1 1 1 4 5768000 5768000 0 11135 1264 11635 27659;27660;27661;27662 19540 19540 1 262550 0 PSDLGTK SDPTYRELIEQLRNKPSDLGTKLQDPRIMT LIEQLRNKPSDLGTKLQDPRIMTTLSVLLG K P S T K L 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 7 0 716.37047 P31948 P31948 163 169 STIP1 Stress-induced-phosphoprotein 1 yes yes 1 0.048331 87.754 By MS/MS 5 0.816 1 1 1 3 819540 819540 0 11136 762 11636 27663;27664;27665 19541 19541 1 16374 0 PSENLGQVLFGER EYTAFDFCQASEGKRPSENLGQVLFGERIE KRPSENLGQVLFGERIEPSPYKFTFNKKET R P S E R I 0 1 1 0 0 1 2 2 0 0 2 0 0 1 1 1 0 0 0 1 0 0 13 0 1444.731 Q99805 Q99805 92 104 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 2 0.00047856 138.45 By MS/MS 2 0.816 1 1 1 3 468420 468420 0 11137 2293 11637 27666;27667;27668 19542;19543 19543 2 18353 0 PSKGPLQSVQVFGR ______________________________ MPSKGPLQSVQVFGRKKTATAVAHCKRGNG M P S G R K 0 1 0 0 0 2 0 2 0 0 1 1 0 1 2 2 0 0 0 2 0 0 14 1 1498.8256 P62249 P62249 2 15 RPS16 40S ribosomal protein S16 yes yes 3 0.017294 74.475 By MS/MS 10 0 1 1 219510 219510 0 11138 1120 11638 27669 19544 19544 1 233320 0 PSQPEGLR KRSFSKEVEERSRERPSQPEGLRKAASLTE EERSRERPSQPEGLRKAASLTEDRDRGRDA R P S L R K 0 1 0 0 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 8 0 882.45593 Q04637 Q04637 1198 1205 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.031882 98.458 By MS/MS 2 0 1 1 126490 126490 0 11139 1264 11639 27670 19545 19545 1 6287.4 0 PSQPEGLRK KRSFSKEVEERSRERPSQPEGLRKAASLTE ERSRERPSQPEGLRKAASLTEDRDRGRDAV R P S R K A 0 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1010.5509 Q04637 Q04637 1198 1206 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.031093 81.525 By MS/MS 2 0 1 1 288420 288420 0 11140 1264 11640 27671 19546 19546 1 14336 0 PSQVVAETR HWQILPGDPFDNSSRPSQVVAETRKRKGLK FDNSSRPSQVVAETRKRKGLKEGIPALDNF R P S T R K 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 9 0 985.51926 P13639 P13639 831 839 EEF2 Elongation factor 2 yes yes 2 3.3409E-06 183.72 By MS/MS By matching 6.33 2.21 2 1 1 1 1 5 1 7291000 7256700 34328 11141 576 11641 27672;27673;27674;27675;27676;27677 19547;19548;19549 19547 3 225600 71731 PSSRGEYVVAK STQPALPKARAVAPKPSSRGEYVVAKLDDL VAPKPSSRGEYVVAKLDDLVNWARRSSLWP K P S A K L 1 1 0 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 1 2 0 0 11 1 1191.6248 O75251 O75251 56 66 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 3 0.032972 70.808 By MS/MS 9.5 0.5 1 1 2 204760 204760 0 11142 293 11642 27678;27679 19550 19550 1 144610 0 PSSSPVIFAGGQDR SQSPPKGVTIPYRPKPSSSPVIFAGGQDRY KPSSSPVIFAGGQDRYSTGSDSASFPHTTP K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 Q15366 Q15366 186 199 PCBP2 Poly(rC)-binding protein 2 yes yes 2 5.5978E-12 199.12 By MS/MS 7.5 0.5 1 1 2 9384100 9384100 0 11143 1491 11643 27680;27681 19551;19552 19551 2 213880 0 PSVGHIHR SQLMVSSPPYSLSPRPSVGHIHRRVTDHLG PYSLSPRPSVGHIHRRVTDHLGVVYYVGDT R P S H R R 0 1 0 0 0 0 0 1 2 1 0 0 0 0 1 1 0 0 0 1 0 0 8 0 901.48823 Q9NXW2 Q9NXW2 278 285 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2 0.0040785 154.01 By MS/MS 7 0 1 1 0 0 0 11144 2694 11644 27682 19553 19553 1 0 0 PTATQLTR QGGAQPSVEAPAAPRPTATQLTRDLLRSRG EAPAAPRPTATQLTRDLLRSRGIAGLYKGL R P T T R D 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 8 0 886.48723 Q9H936 Q9H936 168 175 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 0.0082009 125.16 By MS/MS 8 0 1 1 2136100 2136100 0 11145 2528 11645 27683 19554 19554 1 140920 0 PTDGAASELSSIQNLNR LVESDKEEQPDFLPRPTDGAASELSSIQNL DGAASELSSIQNLNRALRETLLAQPAAGQA R P T N R A 2 1 2 1 0 1 1 1 0 1 2 0 0 0 1 3 1 0 0 0 0 0 17 0 1771.8701 Q9NU22 Q9NU22 4004 4020 MDN1 Midasin yes yes 2 2.6089E-22 184.98 By MS/MS 1 0 1 1 0 0 0 11146 2635 11646 27684 19555 19555 1 0 0 PTTQAQQLK P T L K 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 0 2 0 0 0 0 0 9 0 1013.5506 REV__Q9NWS0 yes yes 2 0.01145 101.64 By MS/MS 6.33 0.471 2 1 3 93529000 93529000 0 + 11147 3047 11647 27685;27686;27687 19556 19556 1 768240 0 PTTQQSPQDEQEKLLDEAIQAVK ______________________________ DEQEKLLDEAIQAVKVQSFQMKRCLDKNKL M P T V K V 2 0 0 2 0 5 3 0 0 1 2 2 0 0 2 1 2 0 0 1 0 0 23 1 2595.3028 Q96QK1 Q96QK1 2 24 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.00011778 89.721 By MS/MS 5.5 0.5 1 1 2 3282000 3282000 0 11148 2242 11648 27688;27689 19557;19558 19558 2 33060 0 PTYTNLNR EAIYDICRRNLDIERPTYTNLNRLISQIVS RNLDIERPTYTNLNRLISQIVSSITASLRF R P T N R L 0 1 2 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 1 0 0 0 8 0 977.49304 P68363;Q9H853;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 222 229 TUBA1B;TUBA4B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2 1.1955E-13 249.49 By MS/MS By matching 6 0 2 1 1 16922000 16896000 25713 11149 1185;1754;2314;1186 11649 27690;27691 19559 19559 1 131760 78861 PVASQLPR KDLQNVNITLRILFRPVASQLPRIFTSIGE TLRILFRPVASQLPRIFTSIGEDYDERVLP R P V P R I 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 8 0 866.4974 P35232 P35232 98 105 PHB Prohibitin yes yes 2 0.02399 101.6 By MS/MS 8 0 1 1 1698800 1698800 0 11150 782 11650 27692 19560 19560 1 112070 0 PVAVGPYGQSQPSCFDR ______________________________ AVGPYGQSQPSCFDRVKMGFVMGCAVGMAA M P V D R V 1 1 0 1 1 2 0 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 17 0 1863.8574 P60602 P60602 2 18 ROMO1 Reactive oxygen species modulator 1 yes yes 2 1.5978E-06 140.31 By MS/MS 10 0 1 1 354300 354300 0 11151 1069 11651 27693 19561 19561 1 376580 0 PVAVTDGAMSK LVLWSFTPLGSLVPRPVAVTDGAMSKVEAI LVPRPVAVTDGAMSKVEAIASALGVVSLRN R P V S K V 2 0 0 1 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 2 0 0 11 0 1074.5379 P0DP72 P0DP72 79 89 yes yes 2 0.016475 85.676 By MS/MS By MS/MS 6.33 3.27 2 1 1 1 1 1 2 2 7 2411400 571690 1839700 11152 532 11652 27694;27695;27696;27697;27698;27699;27700;27701;27702 19562;19563 19563 319 2 118540 12914000 PVIVEPLEQLDDEDGLPEK ERCSEGVFLLTTTPRPVIVEPLEQLDDEDG EPLEQLDDEDGLPEKLAQKNPMYQKERETP R P V E K L 0 0 0 3 0 1 4 1 0 1 3 1 0 0 3 0 0 0 0 2 0 0 19 0 2134.0681 P23246 P23246 444 462 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 1.3066E-07 150.76 By MS/MS 4 0 1 1 417360 417360 0 11153 665 11653 27703 19564 19564 1 11394 0 PVLLQVAESAYR LAEAQRQKASGDSARPVLLQVAESAYRFGL SARPVLLQVAESAYRFGLGSVAGAVGATAV R P V Y R F 2 1 0 0 0 1 1 0 0 0 2 0 0 0 1 1 0 0 1 2 0 0 12 0 1344.7402 Q9UJS0 Q9UJS0 320 331 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 6.6608E-05 162.38 By MS/MS 5 0 1 1 767190 767190 0 11154 2798 11654 27704 19565 19565 1 31535 0 PVLVLSQNTK ______________________________ MMGHRPVLVLSQNTKRESGRKVQSGNINAA R P V T K R 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 1 1 0 0 2 0 0 10 0 1097.6445 P49368 P49368 6 15 CCT3 T-complex protein 1 subunit gamma yes yes 2 0.00053746 153.24 By MS/MS 6 0.816 1 1 1 3 11379000 11379000 0 11155 916 11655 27705;27706;27707 19566 19566 1 108230 0 PVNLGLWDTAGQEDYDR TVFDNYSANVMVDGKPVNLGLWDTAGQEDY NLGLWDTAGQEDYDRLRPLSYPQTDVFLIC K P V D R L 1 1 1 3 0 1 1 2 0 0 2 0 0 0 1 0 1 1 1 1 0 0 17 0 1947.8963 P60763;P15153;P63000 P60763 50 66 RAC3;RAC2;RAC1 Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 1 no no 2 6.3793E-07 198.37 By MS/MS 9 0 1 1 206180 206180 0 11156 1073;1166 11656 27708 19567 19567 1 118330 0 PVQDLIK KKLTVNPGTKSKLPKPVQDLIKMIFDVESM GTKSKLPKPVQDLIKMIFDVESMKKAMVEY K P V I K M 0 0 0 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 7 0 811.48035 P09874 P09874 668 674 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.036001 110.81 By MS/MS 4 0.816 1 1 1 3 1085200 1085200 0 11157 521 11657 27709;27710;27711 19568 19568 1 29926 0 PVTALEYTFSR YRDQIPSPGLMVFPKPVTALEYTFSRSDPT VFPKPVTALEYTFSRSDPTSYAGYIEDLKK K P V S R S 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 1 2 0 1 1 0 0 11 0 1282.6558 P54709 P54709 87 97 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 2 0.00083495 135.86 By MS/MS 7.5 1.12 1 1 1 1 4 4032500 4032500 0 11158 1017 11658 27712;27713;27714;27715 19569 19569 1 112190 0 PVTTPEEIAQVATISANGDK LAVDAVIAELKKQSKPVTTPEEIAQVATIS EEIAQVATISANGDKEIGNIISDAMKKVGR K P V D K E 3 0 1 1 0 1 2 1 0 2 0 1 0 0 2 1 3 0 0 2 0 0 20 0 2040.0375 P10809 P10809 161 180 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 9.0038E-40 238.64 By MS/MS 6 0 1 1 1546200 1546200 0 11159 544 11659 27716 19570 19570 1 12057 0 PVVTISDEPDILYK QFSNLHVDVPKDLTKPVVTISDEPDILYKR KPVVTISDEPDILYKRLSVLVKGHDKAVLD K P V Y K R 0 0 0 2 0 0 1 0 0 2 1 1 0 0 2 1 1 0 1 2 0 0 14 0 1587.8396 P82664 P82664 61 74 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 2 0.00087939 125.74 By MS/MS 9.5 0.5 1 1 2 277680 277680 0 11160 1203 11660 27717;27718 19571 19571 1 200930 0 PVYHAITK FNISHTQTRLLSMAKPVYHAITKHSPKKPV RLLSMAKPVYHAITKHSPKKPVIVFVPSRK K P V T K H 1 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 1 0 1 1 0 0 8 0 927.5178 O75643 O75643 1545 1552 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 3 0.048596 80.438 By MS/MS 1.5 0.5 1 1 2 240070 240070 0 11161 322 11661 27719;27720 19572;19573 19573 2 11876 0 PYANQPTVR ______________________________ ______________________________ M P Y V R I 1 1 1 0 0 1 0 0 0 0 0 0 0 0 2 0 1 0 1 1 0 0 9 0 1044.5352 P19387 P19387 2 10 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 2 0.00086498 145.16 By MS/MS 8 0 1 1 807890 807890 0 11162 631 11662 27721 19574 19574 1 53296 0 PYQYPALTPEQK ______________________________ ______________________________ M P Y Q K K 1 0 0 0 0 2 1 0 0 0 1 1 0 0 3 0 1 0 2 0 0 0 12 0 1433.7191 P04075 P04075 2 13 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.0015175 127.42 By MS/MS 7 0 1 1 1345900 1345900 0 11163 444 11663 27722 19575 19575 1 24052 0 PYVEEGLHPQIIIR TSVTLLAAEFLKQVKPYVEEGLHPQIIIRA KPYVEEGLHPQIIIRAFRTATQLAVNKIKE K P Y I R A 0 1 0 0 0 1 2 1 1 3 1 0 0 0 2 0 0 0 1 1 0 0 14 0 1662.9093 Q99832 Q99832 110 123 CCT7 T-complex protein 1 subunit eta yes yes 3 0.0022138 108.68 By MS/MS 6 0 1 1 0 0 0 11164 2295 11664 27723 19576 19576 1 0 0 PYVPLLEAEEVR LGKDSGPLSDPITGKPYVPLLEAEEVRLSQ TGKPYVPLLEAEEVRLSQSLLELWRRRGPV K P Y V R L 1 1 0 0 0 0 3 0 0 0 2 0 0 0 2 0 0 0 1 2 0 0 12 0 1413.7504 Q7L2E3 Q7L2E3 401 412 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00033946 146.11 By MS/MS 3.5 0.5 1 1 2 713760 713760 0 11165 1763 11665 27724;27725 19577 19577 1 18845 0 QAAAAACQLFK VEVEGYGSKKIDAERQAAAAACQLFKGWGL DAERQAAAAACQLFKGWGLLGPRNELFDAA R Q A F K G 5 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 11 0 1177.5914 Q7L2E3 Q7L2E3 112 122 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 4.8981E-22 239.66 By MS/MS 2.83 1.07 1 1 2 2 6 5265500 5265500 0 11166 1763 11666;11667 27726;27727;27728;27729;27730;27731 19578;19579;19580;19581 19578 2 140940 0 QAAAIILNIYCSR EYLLEATRSPEVGMRQAAAIILNIYCSRSK MRQAAAIILNIYCSRSKADYTSHLRSLVSG R Q A S R S 3 1 1 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 0 13 0 1491.7868 Q92616 Q92616 2169 2181 GCN1L1 Translational activator GCN1 yes yes 2 0.0012375 114.83 By MS/MS 2 0 1 1 0 0 0 11167 2068 11668 27732 19582;19583;19584 19583 0 0 0 QAAASATQTIAAAQHAASTPK AIKKKLVQRLEHAAKQAAASATQTIAAAQH TQTIAAAQHAASTPKASAGPQPLLVQSCKA K Q A P K A 9 0 0 0 0 3 0 0 1 1 0 1 0 0 1 2 3 0 0 0 0 0 21 0 1994.0181 Q9Y490 Q9Y490 923 943 TLN1 Talin-1 yes yes 2;3 2.6994E-77 306.37 By MS/MS 2.17 0.687 1 3 2 6 1273100 1273100 0 11168 2947 11669;11670 27733;27734;27735;27736;27737;27738 19585;19586;19587;19588;19589 19585 1 45615 0 QAAECGPEPGVSGVGELIVR ARAEEAAGQLRRELRQAAECGPEPGVSGVG GPEPGVSGVGELIVRELDLASLRSVRAFCQ R Q A V R E 2 1 0 0 1 1 3 4 0 1 1 0 0 0 2 1 0 0 0 3 0 0 20 0 2023.9997 Q9HBH5 Q9HBH5 93 112 RDH14 Retinol dehydrogenase 14 yes yes 2 9.9082E-25 209.33 By MS/MS 8 0 1 1 779380 779380 0 11169 2552 11671 27739 19590 19590 1 51415 0 QAAEVMGR AGAEALSQAVARYQRQAAEVMGRLMEIYQE AVARYQRQAAEVMGRLMEIYQEKLYRPPPV R Q A G R L 2 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 8 0 860.41744 Q92616 Q92616 1193 1200 GCN1L1 Translational activator GCN1 yes yes 1 0.0472 69.628 By MS/MS 2 0 1 1 0 0 0 11170 2068 11672 27740 19591 19591 0 0 0 QAANLQDCYR RRFPDLNRLAKKFQRQAANLQDCYRLYQGI KKFQRQAANLQDCYRLYQGINQLPNVIQAL R Q A Y R L 2 1 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 0 1237.551 P43246 P43246 397 406 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.00084921 129.85 By MS/MS 4.5 0.5 1 1 2 3013700 3013700 0 11171 862 11673 27741;27742 19592 19592 1 84612 0 QAAPCVLFFDELDSIAK GESEANVREIFDKARQAAPCVLFFDELDSI APCVLFFDELDSIAKARGGNIGDGGGAADR R Q A A K A 3 0 0 2 1 1 1 0 0 1 2 1 0 2 1 1 0 0 0 1 0 0 17 0 1922.9448 P55072 P55072 568 584 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.00027027 153.49 By MS/MS 5 1 2 2 4 661910 661910 0 11172 1026 11674;11675 27743;27744;27745;27746 19593;19594;19595;19596;19597;19598 19593 3 8654.1 0 QAASGLVGQENAR SHVKGLGLDESGLAKQAASGLVGQENAREA AKQAASGLVGQENAREACGVIVELIKSKKM K Q A A R E 3 1 1 0 0 2 1 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1299.6531 Q9Y265 Q9Y265 34 46 RUVBL1 RuvB-like 1 yes yes 2 9.6377E-09 231.66 By MS/MS By matching 7.25 1.48 4 1 1 1 1 6 2 50560000 50439000 121130 11173 2870 11676;11677 27747;27748;27749;27750;27751;27752;27753;27754 19599;19600;19601;19602 19599 2 755850 371490 QAASSLQQASLK ELLARKDSETGENIRQAASSLQQASLKLFE NIRQAASSLQQASLKLFEMAYKKMASEREG R Q A L K L 3 0 0 0 0 3 0 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 12 0 1230.6568 P38646 P38646 635 646 HSPA9 Stress-70 protein, mitochondrial yes yes 2 6.0882E-05 155.33 By MS/MS By matching 6.88 1.83 3 1 1 1 1 1 7 1 43356000 43189000 166960 11174 820 11678;11679 27755;27756;27757;27758;27759;27760;27761;27762 19603;19604;19605;19606 19606 3 1779100 494020 QAAVGQGDFHLLDHR EKERLQQQKRTEALRQAAVGQGDFHLLDHR QAAVGQGDFHLLDHRGRARCKADFRGQWVL R Q A H R G 2 1 0 2 0 2 0 2 2 0 2 0 0 1 0 0 0 0 0 1 0 0 15 0 1662.8227 O43819 O43819 96 110 SCO2 Protein SCO2 homolog, mitochondrial yes yes 3 0.037966 62.077 By MS/MS 8 0 1 1 4178500 4178500 0 11175 226 11680 27763 19607 19607 1 275660 0 QADLYISEGLHPR DGTTSNVLIIGELLKQADLYISEGLHPRII LKQADLYISEGLHPRIITEGFEAAKEKALQ K Q A P R I 1 1 0 1 0 1 1 1 1 1 2 0 0 0 1 1 0 0 1 0 0 0 13 0 1497.7576 P40227;Q92526 P40227 105 117 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2;3 6.7977E-59 298.58 By MS/MS By matching 6.11 2.33 1 1 1 3 4 3 2 2 1 17 1 294380000 294360000 21635 11176 828 11681;11682 27764;27765;27766;27767;27768;27769;27770;27771;27772;27773;27774;27775;27776;27777;27778;27779;27780;27781 19608;19609;19610;19611;19612;19613;19614;19615;19616;19617 19611 6 3500900 66353 QADSDIPLDR SQGSDTAWRVPNGAKQADSDIPLDRLTISY PNGAKQADSDIPLDRLTISYCRSSGPGGQN K Q A D R L 1 1 0 3 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1128.5411 Q14197 Q14197 67 76 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.0027007 114.97 By MS/MS 9 0 1 1 2267800 2267800 0 11177 1419 11683 27782 19618 19618 1 1301500 0 QADVNLVNAK LSPAVIVGLLKEASKQADVNLVNAKLLVKE KEASKQADVNLVNAKLLVKEAGLNVTTSHS K Q A A K L 2 0 2 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1070.572 O43175 O43175 385 394 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 9.6016E-05 166.09 By MS/MS 7.25 1.48 1 1 1 1 4 7790800 7790800 0 11178 185 11684 27783;27784;27785;27786 19619 19619 1 360990 0 QADYVPSDQDLLR IDCAQYFLDKIDVIKQADYVPSDQDLLRCR IKQADYVPSDQDLLRCRVLTSGIFETKFQV K Q A L R C 1 1 0 3 0 2 0 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 13 0 1518.7314 P63092;Q5JWF2 P63092 187 199 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.00092257 132.32 By MS/MS 7 0 1 1 3474100 3474100 0 11179 1168 11685 27787 19620 19620 1 62083 0 QAEETYENIPGQSK LLLGNLLSPDNVVRKQAEETYENIPGQSKI KQAEETYENIPGQSKITFLLQAIRNTTAAE K Q A S K I 1 0 1 0 0 2 3 1 0 1 0 1 0 0 1 1 1 0 1 0 0 0 14 0 1592.7318 O00410 O00410 28 41 IPO5 Importin-5 yes yes 2 4.3263E-35 258.65 By MS/MS 6 1.41 1 1 1 1 1 5 4885100 4885100 0 11180 91 11686 27788;27789;27790;27791;27792 19621 19621 1 128640 0 QAEIWLHK VNCKKALETCGGDLKQAEIWLHKEAQKEGW TCGGDLKQAEIWLHKEAQKEGWSKAAKLQG K Q A H K E 1 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 8 0 1023.5502 P43897 P43897 77 84 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.0056401 115.49 By MS/MS 8.33 0.471 2 1 3 3258900 3258900 0 11181 868 11687;11688 27793;27794;27795 19622;19623 19623 1 214990 0 QAELAQWQK PTREKLTPEQLHSMRQAELAQWQKVLPRRR QLHSMRQAELAQWQKVLPRRRTRNIVTGLG R Q A Q K V 2 0 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 9 0 1100.5615 Q9Y2R0 Q9Y2R0 40 48 COA3 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes yes 2 3.2641E-16 236.21 By MS/MS 10 0 2 2 895560 895560 0 11182 2897 11689;11690 27796;27797 19624;19625 19624 1 951890 0 QAEPTPDDALPK TPEDDELDELRPGQRQAEPTPDDALPKQEG GQRQAEPTPDDALPKQEGTASGGPDGSCDS R Q A P K Q 2 0 0 2 0 1 1 0 0 0 1 1 0 0 3 0 1 0 0 0 0 0 12 0 1280.6248 Q08AM6 Q08AM6 348 359 VAC14 Protein VAC14 homolog yes yes 2 0.010752 96.171 By MS/MS 5 0 1 1 535700 535700 0 11183 1294 11691 27798 19626 19626 1 22020 0 QAEQLSAAGEGGDAGR FTQVTRKGGRRAKKRQAEQLSAAGEGGDAG AEQLSAAGEGGDAGRMDTEEARPAKRPVFP R Q A G R M 4 1 0 1 0 2 2 4 0 0 1 0 0 0 0 1 0 0 0 0 0 0 16 0 1515.6914 Q9NRX1 Q9NRX1 31 46 PNO1 RNA-binding protein PNO1 yes yes 2 8.7679E-06 178.67 By MS/MS 8 0 1 1 912930 912930 0 11184 2613 11692 27799 19627 19627 1 60226 0 QAESASEAAKK SQQATLLASNEAFKKQAESASEAAKKYMEE AFKKQAESASEAAKKYMEENDQLKKGAAVD K Q A K K Y 4 0 0 0 0 1 2 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 11 1 1118.5568 P51572 P51572 139 149 BCAP31 B-cell receptor-associated protein 31 yes yes 2 0.045999 96.665 By MS/MS 8 0 1 1 141130 141130 0 11185 969 11693 27800 19628 19628 1 9310.3 0 QAFAHVSK FDKEFSITEFSEGAKQAFAHVSKLLSQCKF EFSEGAKQAFAHVSKLLSQCKFDLLEELVA K Q A S K L 2 0 0 0 0 1 0 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 8 0 886.4661 Q8WWC4 Q8WWC4 150 157 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.0094064 104.06 By MS/MS 9 0 2 2 0 0 0 11186 2037 11694 27801;27802 19629;19630 19629 0 0 0 QAGAEALSQAVAR SLLIDDVIYHEAAVRQAGAEALSQAVARYQ VRQAGAEALSQAVARYQRQAAEVMGRLMEI R Q A A R Y 5 1 0 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1270.663 Q92616 Q92616 1177 1189 GCN1L1 Translational activator GCN1 yes yes 2 1.5631E-25 245.13 By MS/MS 2 0.816 2 2 2 6 10166000 10166000 0 11187 2068 11695;11696 27803;27804;27805;27806;27807;27808 19631;19632;19633;19634 19632 3 435320 0 QAGGFLGPPPPSGK IQKILGLAPSRAATKQAGGFLGPPPPSGKF KQAGGFLGPPPPSGKFS_____________ K Q A G K F 1 0 0 0 0 1 0 4 0 0 1 1 0 1 4 1 0 0 0 0 0 0 14 0 1308.6826 Q9UM00 Q9UM00 224 237 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 2 8.383E-05 150.14 By MS/MS 9.33 0.471 2 1 3 3564400 3564400 0 11188 2831 11697;11698 27809;27810;27811 19635;19636 19635 1 2069600 0 QAGLLTTDPR ALCSFVTEDEVEWMRQAGLLTTDPRVRERK VEWMRQAGLLTTDPRVRERKKPGQEGARRK R Q A P R V 1 1 0 1 0 1 0 1 0 0 2 0 0 0 1 0 2 0 0 0 0 0 10 0 1070.572 P82933 P82933 366 375 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.0089912 91.584 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 1585100 1437700 147440 11189 1211 11699;11700 27812;27813;27814 19637;19638 19638 1 94845 605250 QAGVFEPTIVK WIGLDLSNGKPRDNKQAGVFEPTIVKVKSL RDNKQAGVFEPTIVKVKSLKFATEAAITIL K Q A V K V 1 0 0 0 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 2 0 0 11 0 1187.655 P17987 P17987 500 510 TCP1 T-complex protein 1 subunit alpha yes yes 2 9.3051E-05 162.88 By MS/MS By matching 6.25 2.68 1 1 1 1 2 2 2 2 2 2 15 1 205120000 204920000 202690 11190 619 11701;11702 27815;27816;27817;27818;27819;27820;27821;27822;27823;27824;27825;27826;27827;27828;27829;27830 19639;19640;19641;19642;19643;19644;19645;19646;19647;19648;19649;19650;19651 19639 11 3698900 621640 QAGVYHPNVK IFSAGIGDVLEEVIRQAGVYHPNVKVVSNF EEVIRQAGVYHPNVKVVSNFMDFDETGVLK R Q A V K V 1 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 1 2 0 0 10 0 1111.5774 Q9H0P0 Q9H0P0 216 225 NT5C3A Cytosolic 5-nucleotidase 3A yes yes 2 0.03464 71.692 By MS/MS 7 0 1 1 0 0 0 11191 2455 11703 27831 19652 19652 0 0 0 QAHLCVLASNCDEPMYVK LARGIREAAKALDKRQAHLCVLASNCDEPM LCVLASNCDEPMYVKLVEALCAEHQINLIK R Q A V K L 2 0 1 1 2 1 1 0 1 0 2 1 1 0 1 1 0 0 1 2 0 0 18 0 2133.9646 P25398 P25398 46 63 RPS12 40S ribosomal protein S12 yes yes 3 0.009027 79.393 By MS/MS 10 0 1 1 571390 571390 0 11192 684 11704 27832 19653 19653 458 1 607330 0 QAHTMDPQLR DLSRFDASFFGVHPKQAHTMDPQLRLLLEV GVHPKQAHTMDPQLRLLLEVTYEAIVDGGI K Q A L R L 1 1 0 1 0 2 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 10 0 1195.5768 P49327 P49327 71 80 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00054448 120.86 By MS/MS 1.89 0.737 3 4 2 9 4422800 4422800 0 11193 915 11705;11706;11707;11708 27833;27834;27835;27836;27837;27838;27839;27840;27841 19654;19655;19656;19657;19658 19658 3 215520 0 QAIGIALETR VNKMFQRCLDDHKYKQAIGIALETRRLDVF DHKYKQAIGIALETRRLDVFEKTILESNDV K Q A T R R 2 1 0 0 0 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1070.6084 Q99460 Q99460 149 158 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.00024755 154.85 By MS/MS By matching 3 1.31 1 2 1 2 1 5 2 9591300 9524200 67128 11194 2268 11709;11710 27842;27843;27844;27845;27846;27847;27848 19659;19660 19659 1 267050 64227 QAITQVVVSR DENGNRLGESANAAKQAITQVVVSRILMAA ANAAKQAITQVVVSRILMAAPGMAIPPFIM K Q A S R I 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 1 1 0 0 3 0 0 10 0 1099.635 Q9H9B4 Q9H9B4 224 233 SFXN1 Sideroflexin-1 yes yes 2 0.00011746 163.66 By MS/MS By MS/MS 7.08 2.75 1 1 1 2 3 2 2 11 1 94266000 94266000 0 11195 2533 11711;11712 27849;27850;27851;27852;27853;27854;27855;27856;27857;27858;27859;27860 19661;19662;19663;19664;19665;19666;19667 19667 4 7579800 0 QALAEQLK RGDKKRERQILFQHRQALAEQLKVTEDPAL QILFQHRQALAEQLKVTEDPALILHLTSVL R Q A L K V 2 0 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 899.50763 O94874 O94874 670 677 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.052476 90.37 By MS/MS 5 0 1 1 1492900 1492900 0 11196 354 11713 27861 19668 19668 1 61364 0 QALAYLEQSYK LKNRSSVEVRMEFVRQALAYLEQSYKNYTL EFVRQALAYLEQSYKNYTLVTVFGNLHQAQ R Q A Y K N 2 0 0 0 0 2 1 0 0 0 2 1 0 0 0 1 0 0 2 0 0 0 11 0 1312.6663 Q8N1F7 Q8N1F7 257 267 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.003721 115.78 By MS/MS 5 0 1 1 0 0 0 11197 1898 11714 27862 19669 19669 0 0 0 QALDFIFAPGR FMVDLWHPNVAAAERQALDFIFAPGR____ AAERQALDFIFAPGR_______________ R Q A G R - 2 1 0 1 0 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 0 11 0 1233.6506 Q6ICH7 Q6ICH7 359 369 ASPHD2 Aspartate beta-hydroxylase domain-containing protein 2 yes yes 2 0.0043689 110.38 By MS/MS 8 0 1 1 203620 203620 0 11198 1683 11715 27863 19670 19670 1 13433 0 QALEQAR RIARLRQEEREQEQRQALEQARKAEEVQAW EEREQEQRQALEQARKAEEVQAWAQRKERE R Q A A R K 2 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 814.42972 Q9BYN8 Q9BYN8 135 141 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.028643 115.46 By MS/MS 9 0 1 1 0 0 0 11199 2417 11716 27864 19671 19671 1 0 0 QALESILASER IKELILDIKYPATKKQALESILASERLPFS ATKKQALESILASERLPFSCLRNITQTLMD K Q A E R L 2 1 0 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1215.6459 Q9H2M9 Q9H2M9 593 603 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.00066839 126.03 By MS/MS 3 0 1 1 0 0 0 11200 2481 11717 27865 19672 19672 0 0 0 QALETVNDYNPLMK RFHATVSFDTDTGLKQALETVNDYNPLMKD KQALETVNDYNPLMKDFPLNDLLSATELDK K Q A M K D 1 0 2 1 0 1 1 0 0 0 2 1 1 0 1 0 1 0 1 1 0 0 14 0 1634.7974 Q14204 Q14204 324 337 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.1169E-06 175.49 By MS/MS 1.5 0.5 2 2 4 689610 689610 0 11201 1421 11718;11719 27866;27867;27868;27869 19673;19674;19675 19673 1113 2 33816 0 QALHSGQNQLK KQRLRHEILLSQSVRQALHSGQNQLKEMAI QSVRQALHSGQNQLKEMAIPVLEARACAAA R Q A L K E 1 0 1 0 0 3 0 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1222.6418 P54886 P54886 139 149 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 5.3572E-05 188.91 By MS/MS By MS/MS 4.92 1.82 2 6 3 2 9 4 16703000 16626000 76671 11202 1019 11720;11721 27870;27871;27872;27873;27874;27875;27876;27877;27878;27879;27880;27881;27882 19676;19677;19678;19679;19680;19681 19680 2 427100 226870 QALLEAVAGK TTMYELESSRSMQKKQALLEAVAGKEGDSF SMQKKQALLEAVAGKEGDSFNTQCLKLA__ K Q A G K E 3 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 10 0 998.57605 Q8WVT3 Q8WVT3 713 722 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 0.050153 78.939 By MS/MS 4.5 0.5 1 1 2 1441000 1441000 0 11203 2034 11722 27883;27884 19682 19682 1 55567 0 QALSEVTAALR SSSLDDVDHKILTAKQALSEVTAALRERLH LTAKQALSEVTAALRERLHRWQQIEILCGF K Q A L R E 3 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 11 0 1157.6404 Q13586 Q13586 414 424 STIM1 Stromal interaction molecule 1 yes yes 2 0.00054174 130.01 By MS/MS 4.67 0.471 1 2 3 1365300 1365300 0 11204 1384 11723;11724 27885;27886;27887 19683;19684 19684 1 56119 0 QAMTSIWNALVTDK PRLYRYQFDPNLGIRQAMTSIWNALVTDKS RQAMTSIWNALVTDKSMVDKYLKEILQDLV R Q A D K S 2 0 1 1 0 1 0 0 0 1 1 1 1 0 0 1 2 1 0 1 0 0 14 0 1576.7919 Q5VYK3 Q5VYK3 1140 1153 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.038927 73.082 By MS/MS 3 0 1 1 0 0 0 11205 1657 11725 27888 19685 19685 1206 0 0 0 QANKEYLLGSTAEEK PSLTGLTTIAAHLVKQANKEYLLGSTAEEK QANKEYLLGSTAEEKAIVQQWLEYRVTQVD K Q A E K A 2 0 1 0 0 1 3 1 0 0 2 2 0 0 0 1 1 0 1 0 0 0 15 1 1679.8366 O43324 O43324 54 68 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2;3 3.5045E-28 250.51 By MS/MS 9.5 0.5 3 3 6 7253700 7253700 0 11206 194 11726;11727 27889;27890;27891;27892;27893;27894 19686;19687;19688 19688 2 4400500 0 QAPESPWEEQLAR LLSKQMAGCLEDCTRQAPESPWEEQLARLL TRQAPESPWEEQLARLLQEAPGKLSLDVEQ R Q A A R L 2 1 0 0 0 2 3 0 0 0 1 0 0 0 2 1 0 1 0 0 0 0 13 0 1539.7318 O00411 O00411 181 193 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 2.7898E-08 193.22 By MS/MS 3.5 0.5 2 2 4 4752700 4752700 0 11207 92 11728;11729 27895;27896;27897;27898 19689;19690 19689 1 124550 0 QAPQPQSSLQR SVSKQETIMRHHTLRQAPQPQSSLQRGIPT HTLRQAPQPQSSLQRGIPTSARSMLSNFAQ R Q A Q R G 1 1 0 0 0 4 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 11 0 1238.6367 Q8WXI9 Q8WXI9 510 520 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0057859 104.43 By MS/MS 5 0 1 1 656310 656310 0 11208 2047 11730 27899 19691 19691 1 26977 0 QAQIEVVPSASALIIK WKGLRITVKLTIQNRQAQIEVVPSASALII AQIEVVPSASALIIKALKEPPRDRKKQKNI R Q A I K A 3 0 0 0 0 2 1 0 0 3 1 1 0 0 1 2 0 0 0 2 0 0 16 0 1665.9665 P30050 P30050 68 83 RPL12 60S ribosomal protein L12 yes yes 2 8.062E-05 136.7 By MS/MS 9.5 0.5 2 2 4 549930 549930 0 11209 733 11731;11732 27900;27901;27902;27903 19692;19693;19694 19692 2 440950 0 QAQILASEAEK EGTRESAINVAEGKKQAQILASEAEKAEQI EGKKQAQILASEAEKAEQINQAAGEASAVL K Q A E K A 3 0 0 0 0 2 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1186.6194 Q9UJZ1 Q9UJZ1 223 233 STOML2 Stomatin-like protein 2, mitochondrial yes yes 2 0.0032132 115.23 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 3542900 3451500 91456 11210 2806 11733 27904;27905;27906 19695;19696 19696 2 68850 375440 QAQQTVR ALVAVLLSRTWHVRRQAQQTVRKLLSSLGG SRTWHVRRQAQQTVRKLLSSLGGFKLAHGL R Q A V R K 1 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 7 0 829.44061 Q92616 Q92616 583 589 GCN1L1 Translational activator GCN1 yes yes 2 0.015469 138.85 By MS/MS 2.5 1.12 1 1 1 1 4 726640 726640 0 11211 2068 11734 27907;27908;27909;27910 19697 19697 1 30699 0 QAQSPAGVSSEVEVLK VSRHERSLRMTVVKRQAQSPAGVSSEVEVL AQSPAGVSSEVEVLKALKSLFEHHKALDEK R Q A L K A 2 0 0 0 0 2 2 1 0 0 1 1 0 0 1 3 0 0 0 3 0 0 16 0 1627.8417 Q13136 Q13136 147 162 PPFIA1 Liprin-alpha-1 yes yes 2 0.00010252 135.94 By MS/MS 3 0 1 1 681860 681860 0 11212 1338 11735 27911 19698 19698 1 17800 0 QASIQHIQNAIDTEK DKLNEQKLAQLEEAKQASIQHIQNAIDTEK QASIQHIQNAIDTEKSQQALVQKRHYLFDV K Q A E K S 2 0 1 1 0 3 1 0 1 3 0 1 0 0 0 1 1 0 0 0 0 0 15 0 1694.8588 P24539 P24539 140 154 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2;3 4.4814E-63 337.53 By MS/MS 9 0.756 2 3 2 7 13624000 13624000 0 11213 678 11736;11737 27912;27913;27914;27915;27916;27917;27918 19699;19700;19701 19700 2 7789600 0 QASIQHIQNAIDTEKSQQALVQK DKLNEQKLAQLEEAKQASIQHIQNAIDTEK NAIDTEKSQQALVQKRHYLFDVQRNNIAMA K Q A Q K R 3 0 1 1 0 6 1 0 1 3 1 2 0 0 0 2 1 0 0 1 0 0 23 1 2577.3511 P24539 P24539 140 162 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 3 5.3746E-05 93.407 By MS/MS 9 0 1 1 0 0 0 11214 678 11738 27919 19702 19702 0 0 0 QASPNIVIALAGNK DTFARAKNWVKELQRQASPNIVIALAGNKA RQASPNIVIALAGNKADLASKRAVEFQEAQ R Q A N K A 3 0 2 0 0 1 0 1 0 2 1 1 0 0 1 1 0 0 0 1 0 0 14 0 1394.7882 P51148 P51148 122 135 RAB5C Ras-related protein Rab-5C yes yes 2 2.0525E-05 172.61 By MS/MS 9 0.707 1 2 1 4 1424800 1424800 0 11215 959 11739;11740 27920;27921;27922;27923 19703;19704 19703 1 817720 0 QASPNIVIALAGNKADLASK DTFARAKNWVKELQRQASPNIVIALAGNKA IVIALAGNKADLASKRAVEFQEAQAYADDN R Q A S K R 5 0 2 1 0 1 0 1 0 2 2 2 0 0 1 2 0 0 0 1 0 0 20 1 1980.1004 P51148 P51148 122 141 RAB5C Ras-related protein Rab-5C yes yes 2 1.3718E-06 142.19 By MS/MS 9 0 1 1 0 0 0 11216 959 11741 27924 19705 19705 0 0 0 QASPNIVIALSGNK ESFARAKNWVKELQRQASPNIVIALSGNKA RQASPNIVIALSGNKADLANKRAVDFQEAQ R Q A N K A 2 0 2 0 0 1 0 1 0 2 1 1 0 0 1 2 0 0 0 1 0 0 14 0 1410.7831 P20339 P20339 121 134 RAB5A Ras-related protein Rab-5A yes yes 2 0.010284 94.191 By MS/MS 9 0 1 1 498970 498970 0 11217 640 11742 27925 19706 19706 1 286360 0 QASPSIVIALAGNK ETFARAKTWVKELQRQASPSIVIALAGNKA RQASPSIVIALAGNKADLANKRMVEYEEAQ R Q A N K A 3 0 1 0 0 1 0 1 0 2 1 1 0 0 1 2 0 0 0 1 0 0 14 0 1367.7773 P61020 P61020 121 134 RAB5B Ras-related protein Rab-5B yes yes 2 0.0010436 114.86 By MS/MS 9 0 1 1 0 0 0 11218 1084 11743 27926 19707 19707 0 0 0 QASQGMVGQLAAR SHIRGLGLDDALEPRQASQGMVGQLAARRA PRQASQGMVGQLAARRAAGVVLEMIREGKI R Q A A R R 3 1 0 0 0 3 0 2 0 0 1 0 1 0 0 1 0 0 0 1 0 0 13 0 1315.6667 Q9Y230 Q9Y230 41 53 RUVBL2 RuvB-like 2 yes yes 2 3.0518E-05 165.63 By MS/MS 6 0 1 1 12166000 12166000 0 11219 2864 11744 27927 19708 19708 1 94867 0 QASTLIDRPAPHFER GSKFRYSGRTQAQTRQASTLIDRPAPHFER QASTLIDRPAPHFERTSSKRVSRSLDGAPI R Q A E R T 2 2 0 1 0 1 1 0 1 1 1 0 0 1 2 1 1 0 0 0 0 0 15 1 1736.8958 O43491 O43491 527 541 EPB41L2 Band 4.1-like protein 2 yes yes 3 0.015579 65.374 By MS/MS 3 0 1 1 0 0 0 11220 204 11745 27928 19709 19709 0 0 0 QATELALLQR GEAGRAGAAPVAPEKQATELALLQRQHALL VAPEKQATELALLQRQHALLQEELRRCRRL K Q A Q R Q 2 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1141.6455 Q92974 Q92974 800 809 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.00048742 145.46 By MS/MS 4 0 1 1 920570 920570 0 11221 2094 11746 27929 19710 19710 1 25130 0 QATENAKEEVR STWVFPTLGIMHHNKQATENAKEEVRRILG HHNKQATENAKEEVRRILGLLDAYLKTRTF K Q A V R R 2 1 1 0 0 1 3 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 11 1 1273.6262 P26641 P26641 126 136 EEF1G Elongation factor 1-gamma yes yes 2 0.004241 152.69 By MS/MS 6.5 0.5 1 1 2 0 0 0 11222 700 11747 27930;27931 19711 19711 0 0 0 QATENAKEEVRR STWVFPTLGIMHHNKQATENAKEEVRRILG HNKQATENAKEEVRRILGLLDAYLKTRTFL K Q A R R I 2 2 1 0 0 1 3 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 12 2 1429.7274 P26641 P26641 126 137 EEF1G Elongation factor 1-gamma yes yes 2;3 0.005279 134.84 By MS/MS 6.8 0.748 4 4 2 10 9364400 9364400 0 11223 700 11748;11749 27932;27933;27934;27935;27936;27937;27938;27939;27940;27941 19712;19713;19714;19715;19716;19717;19718;19719;19720 19718 2 90306 0 QATKDAGQISGLNVLR NAVITVPAYFNDSQRQATKDAGQISGLNVL ATKDAGQISGLNVLRVINEPTAAALAYGLD R Q A L R V 2 1 1 1 0 2 0 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 16 1 1669.9111 P38646 P38646 203 218 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 7.7674E-20 225.72 By MS/MS By matching 5 0 4 3 1 2537900 2537900 0 11224 820 11750;11751 27942;27943;27944;27945 19721;19722;19723 19722 1 104320 0 QATKDAGTIAGLNVLR NAVVTVPAYFNDSQRQATKDAGTIAGLNVL ATKDAGTIAGLNVLRIINEPTAAAIAYGLD R Q A L R I 3 1 1 1 0 1 0 2 0 1 2 1 0 0 0 0 2 0 0 1 0 0 16 1 1626.9053 P11142 P11142 156 171 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 1.212E-27 240.65 By MS/MS 6.5 1.61 3 1 1 1 6 3369200 3369200 0 11225 546 11752;11753 27946;27947;27948;27949;27950;27951 19724;19725;19726;19727 19725 1 138490 0 QATKDAGVIAGLNVLR NAVITVPAYFNDSQRQATKDAGVIAGLNVL ATKDAGVIAGLNVLRIINEPTAAAIAYGLD R Q A L R I 3 1 1 1 0 1 0 2 0 1 2 1 0 0 0 0 1 0 0 2 0 0 16 1 1624.9261 P0DMV9;P0DMV8 P0DMV9 156 171 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.004014 139.19 By MS/MS 4.75 0.433 1 3 4 772470 772470 0 11226 528 11754;11755 27952;27953;27954;27955 19728;19729;19730 19728 1 31752 0 QATLEAEIAGESK SRRNREAKQKRLREKQATLEAEIAGESKSP EKQATLEAEIAGESKSPAESIKAWRPKELV K Q A S K S 3 0 0 0 0 1 3 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 13 0 1345.6725 Q5ST30 Q5ST30 55 67 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.028286 95.417 By MS/MS 4 0 1 1 2690100 2690100 0 11227 1619 11756 27956 19731 19731 1 73436 0 QATLIPDEVFDAVK IHAIITLKILDYSDKQATLIPDEVFDAVKS KQATLIPDEVFDAVKSNIVTSINFSKNQLC K Q A V K S 2 0 0 2 0 1 1 0 0 1 1 1 0 1 1 0 1 0 0 2 0 0 14 0 1544.8086 Q9H9A6 Q9H9A6 410 423 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.0025209 114.56 By MS/MS 5 0 1 1 419080 419080 0 11228 2532 11757 27957 19732 19732 1 17226 0 QATSISSETK LKRKSSRKETPSATKQATSISSETKNTLRA PSATKQATSISSETKNTLRAFSAPQNSESQ K Q A T K N 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 3 2 0 0 0 0 0 10 0 1050.5193 P52701 P52701 325 334 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.011826 98.048 By MS/MS 3 0 1 1 280980 280980 0 11229 989 11758 27958 19733 19733 1 7334.9 0 QATTIIADNIIFLSDQTK KIDYGEYMDKNNVRRQATTIIADNIIFLSD TIIADNIIFLSDQTKEKE____________ R Q A T K E 2 0 1 2 0 2 0 0 0 4 1 1 0 1 0 1 3 0 0 0 0 0 18 0 1991.0575 Q04837 Q04837 128 145 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.013271 67.234 By MS/MS 10 0 1 1 0 0 0 11230 1267 11759 27959 19734 19734 0 0 0 QATYTTTR GLRGIYTGLSAGLLRQATYTTTRLGIYTVL LSAGLLRQATYTTTRLGIYTVLFERLTGAD R Q A T R L 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 8 0 940.46141 Q02978 Q02978 91 98 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.0081596 125.31 By MS/MS By matching 5.89 3.18 1 1 1 1 3 1 1 8 1 29844000 29811000 32716 11231 1260 11760;11761 27960;27961;27962;27963;27964;27965;27966;27967;27968 19735;19736;19737 19736 2 2284100 279110 QAVDVSPLR REDSTRIGRAGTVRRQAVDVSPLRRVNQAI AGTVRRQAVDVSPLRRVNQAIWLLCTGARE R Q A L R R 1 1 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 9 0 983.53999 P46782 P46782 137 145 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.011256 102.07 By MS/MS By matching 9 0 2 1 1 6846600 6482300 364300 11232 888 11762 27969;27970 19738 19738 1 3720200 3926200 QAVDVSPLRR REDSTRIGRAGTVRRQAVDVSPLRRVNQAI GTVRRQAVDVSPLRRVNQAIWLLCTGAREA R Q A R R V 1 2 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 10 1 1139.6411 P46782 P46782 137 146 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.0034865 127.46 By MS/MS By matching 9 0 4 2 2 3292300 3175700 116530 11233 888 11763;11764 27971;27972;27973;27974 19739;19740 19739 1 1822600 1255900 QAVEAAKVR TYKLMTQAQLEEATRQAVEAAKVRLKMPPV LEEATRQAVEAAKVRLKMPPVLEERVPIND R Q A V R L 3 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 9 1 970.55598 P82650 P82650 117 125 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 3 0.031883 69.598 By MS/MS By matching 3 0 2 1 1 0 0 0 11234 1201 11765 27975;27976 19741 19741 0 0 0 QAVEQQIQSHR EKEHLNKVQTANEVKQAVEQQIQSHRETHQ NEVKQAVEQQIQSHRETHQKQISSLRDEVE K Q A H R E 1 1 0 0 0 4 1 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1322.6691 P33176 P33176 699 709 KIF5B Kinesin-1 heavy chain yes yes 2 3.4591E-05 164.66 By MS/MS 4 0 1 1 0 0 0 11235 767 11766 27977 19742 19742 0 0 0 QAVLGAGLPISTPCTTINK MGNVLQGGEGQAPTRQAVLGAGLPISTPCT GAGLPISTPCTTINKVCASGMKAIMMASQS R Q A N K V 2 0 1 0 1 1 0 2 0 2 2 1 0 0 2 1 3 0 0 1 0 0 19 0 1940.0401 P24752 P24752 106 124 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 3.4311E-19 198.29 By MS/MS 7.33 0.471 2 1 3 4535400 4535400 0 11236 680 11767;11768 27978;27979;27980 19743;19744 19743 1 81049 0 QAVQILDELAEK SQLSALVDAQLDYHRQAVQILDELAEKLKR YHRQAVQILDELAEKLKRRMREASSRPKRE R Q A E K L 2 0 0 1 0 2 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 12 0 1355.7296 Q99961 Q99961 228 239 SH3GL1 Endophilin-A2 yes yes 2 0.023549 87.184 By MS/MS 6.5 0.5 1 1 2 0 0 0 11237 2299 11769 27981;27982 19745 19745 0 0 0 QAVTNPNNTFYATK FTADGERLVGMPAKRQAVTNPNNTFYATKR RQAVTNPNNTFYATKRLIGRRYDDPEVQKD R Q A T K R 2 0 3 0 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 1 0 0 14 0 1567.7631 P38646 P38646 108 121 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.0736E-35 263.74 By MS/MS By MS/MS 5.71 2.71 1 1 1 1 4 1 1 1 1 2 12 2 72426000 71958000 468440 11238 820 11770;11771 27983;27984;27985;27986;27987;27988;27989;27990;27991;27992;27993;27994;27995;27996 19746;19747;19748;19749;19750;19751;19752;19753;19754;19755;19756 19755 6 4342300 1386100 QAVTNPNNTFYATKR FTADGERLVGMPAKRQAVTNPNNTFYATKR QAVTNPNNTFYATKRLIGRRYDDPEVQKDI R Q A K R L 2 1 3 0 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 1 0 0 15 1 1723.8642 P38646 P38646 108 122 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 0.005216 87.498 By MS/MS By matching 5 0 4 2 2 4854000 4808100 45914 11239 820 11772;11773 27997;27998;27999;28000 19757;19758 19758 1 197630 135860 QCCGTDGVEANYIK SPDEEMKKIVLKVVKQCCGTDGVEANYIKT KQCCGTDGVEANYIKTEILPPFFKHFWQHR K Q C I K T 1 0 1 1 2 1 1 2 0 1 0 1 0 0 0 0 1 0 1 1 0 0 14 0 1613.6814 O75533 O75533 794 807 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0036558 109.72 By MS/MS 3.5 0.5 1 1 2 1043900 1043900 0 11240 315 11774 28001;28002 19759 19759 1 27411 0 QCFLVLR VWVRARVHTSRAKGKQCFLVLRQQQFNVQA HTSRAKGKQCFLVLRQQQFNVQALVAVGDH K Q C L R Q 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 7 0 934.50586 P14868 P14868 75 81 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.015553 138.62 By MS/MS 6.5 0.5 1 1 2 3607300 3607300 0 11241 594 11775 28003;28004 19760 19760 1 29435 0 QCKDYYEILGVSR KGYTAEQVAAVKRVKQCKDYYEILGVSRGA VKQCKDYYEILGVSRGASDEDLKKAYRRLA K Q C S R G 0 1 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 2 1 0 0 13 1 1629.7821 Q9NXW2 Q9NXW2 107 119 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 2;3 0.0043904 145.31 By MS/MS 7 0 2 2 572720 572720 0 11242 2694 11776;11777 28005;28006 19761;19762 19762 1 10235 0 QCLDLLR LLLTPWVKFLWESYRQCLDLLRNNSRVERL KFLWESYRQCLDLLRNNSRVERLYHDIAQQ R Q C L R N 0 1 0 1 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 916.48004 Q14152 Q14152 159 165 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00068767 197.6 By MS/MS 2.6 1.02 1 1 2 1 5 10169000 10169000 0 11243 1409 11778;11779 28007;28008;28009;28010;28011 19763;19764;19765 19763 2 271700 0 QCLKYDAQDK NCWYLRNWTIHTWIRQCLKYDAQDKALYTL HTWIRQCLKYDAQDKALYTLVNKVQYGIFP R Q C D K A 1 0 0 2 1 2 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1267.5867 Q92552 Q92552 115 124 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0071223 147.75 By MS/MS 7 0 1 1 0 0 0 11244 2059 11780 28012 19766 19766 0 0 0 QCLPSLDLSCK LLSLVYKGIAPGDERQCLPSLDLSCKQLAS GDERQCLPSLDLSCKQLASGLLELAFAFGG R Q C C K Q 0 0 0 1 2 1 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 11 0 1319.6214 P78527 P78527 1498 1508 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.597E-05 166.97 By MS/MS 2.29 1.03 2 2 2 1 7 7246000 7246000 0 11245 1197 11781;11782 28013;28014;28015;28016;28017;28018;28019 19767;19768;19769;19770;19771;19772 19767 3 335520 0 QCSDSSAMESLTK RLMDEAVLALRNLARQCSDSSAMESLTKHL ARQCSDSSAMESLTKHLFAILGGSEGKLTV R Q C T K H 1 0 0 1 1 1 1 0 0 0 1 1 1 0 0 4 1 0 0 0 0 0 13 0 1442.6017 Q92616 Q92616 328 340 GCN1L1 Translational activator GCN1 yes yes 2 0.00075555 134.38 By MS/MS 2.33 0.471 2 1 3 1162300 1162300 0 11246 2068 11783;11784 28020;28021;28022 19773;19774 19774 1352 2 56270 0 QCSELGICAVSVGPK HSDPPRAHAHSLVGKQCSELGICAVSVGPK QCSELGICAVSVGPKDMTAQFNNLGVLHVT K Q C P K D 1 0 0 0 2 1 1 2 0 1 1 1 0 0 1 2 0 0 0 2 0 0 15 0 1603.7698 Q00653 Q00653 113 127 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 2 0.01137 77.674 By MS/MS 5 0 1 1 0 0 0 11247 1236 11785 28023 19775 19775 0 0 0 QCVDHYNEVK FVFLEAMYNQGFIRKQCVDHYNEVKSVTIC GFIRKQCVDHYNEVKSVTICDYLPPHLVIY K Q C V K S 0 0 1 1 1 1 1 0 1 0 0 1 0 0 0 0 0 0 1 2 0 0 10 0 1290.5663 O95299 O95299 182 191 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.009621 85.355 By MS/MS 8 0 1 1 0 0 0 11248 384 11786 28024 19776 19776 0 0 0 QCVENADLPEGEK YVETIIAKCIDHYTKQCVENADLPEGEKKP TKQCVENADLPEGEKKPIDQRLEGIVNKMF K Q C E K K 1 0 1 1 1 1 3 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 13 0 1487.6562 Q99460 Q99460 111 123 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 2.7637E-05 166.69 By MS/MS 4 0 1 1 489940 489940 0 11249 2268 11787 28025 19777 19777 1 13375 0 QCVENADLPEGEKKPIDQR YVETIIAKCIDHYTKQCVENADLPEGEKKP NADLPEGEKKPIDQRLEGIVNKMFQRCLDD K Q C Q R L 1 1 1 2 1 2 3 1 0 1 1 2 0 0 2 0 0 0 0 1 0 0 19 2 2225.0746 Q99460 Q99460 111 129 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.0057424 67.449 By MS/MS 4 0 1 1 0 0 0 11250 2268 11788 28026 19778 19778 0 0 0 QDAFLALTQK TERLSSSAEFTGMTRQDAFLALTQKARGKR TGMTRQDAFLALTQKARGKRVGGDVTSDKL R Q D Q K A 2 0 0 1 0 2 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 10 0 1133.6081 Q15031 Q15031 420 429 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0015227 112.11 By MS/MS 4.5 0.5 1 1 2 0 0 0 11251 1467 11789 28027;28028 19779 19779 0 0 0 QDAQSLLAPGK NGIYWEQNTPRLLTRQDAQSLLAPGKFSPA LLTRQDAQSLLAPGKFSPAGVEGCPALPHK R Q D G K F 2 0 0 1 0 2 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 11 0 1126.5982 Q9UDR5 Q9UDR5 323 333 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.0017874 123.11 By MS/MS 4 0 1 1 1204000 1204000 0 11252 2762 11790 28029 19780 19780 1 32868 0 QDAQVVLYR EQKREKEIKSELKMKQDAQVVLYRSYRHGD SELKMKQDAQVVLYRSYRHGDLPDIQIKHS K Q D Y R S 1 1 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 9 0 1090.5771 P78527 P78527 2765 2773 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.034989 74.92 By MS/MS 1.5 0.5 1 1 2 0 0 0 11253 1197 11791 28030;28031 19781;19782 19781 0 0 0 QDCSQLVER ALLTVLNNSMDLDMKQDCSQLVERINVFKT MDLDMKQDCSQLVERINVFKTAFSENEDDE K Q D E R I 0 1 0 1 1 2 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1133.5135 Q9ULT8 Q9ULT8 934 942 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.00056798 151.83 By MS/MS 1.5 0.5 1 1 2 1027900 1027900 0 11254 2826 11792 28032;28033 19783 19783 1 51031 0 QDFETVLLLEPGNK RGTARTFLGKLNEAKQDFETVLLLEPGNKQ KQDFETVLLLEPGNKQAVTELSKIKKELIE K Q D N K Q 0 0 1 1 0 1 2 1 0 0 3 1 0 1 1 0 1 0 0 1 0 0 14 0 1601.8301 Q9H6T3 Q9H6T3 371 384 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 4.8549E-18 222.25 By MS/MS 5.33 0.471 2 1 3 844100 844100 0 11255 2512 11793;11794 28034;28035;28036 19784;19785 19784 1 22724 0 QDGQFSVLFTK TQHAVEGDCDIHVLKQDGQFSVLFTKCDSS HVLKQDGQFSVLFTKCDSSPDSAEDVRKLC K Q D T K C 0 0 0 1 0 2 0 1 0 0 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1268.6401 CON__P12763 CON__P12763 121 131 yes yes 2 0.00078789 136.49 By MS/MS 6.5 1.12 1 1 1 1 4 2135500 2135500 0 + 11256 48 11795 28037;28038;28039;28040 19786;19787 19787 2 32063 0 QDGVLAVTCAQEGVIR WAGGSRGLVHGRLWRQDGVLAVTCAQEGVI DGVLAVTCAQEGVIRVKPQVSESKL_____ R Q D I R V 2 1 0 1 1 2 1 2 0 1 1 0 0 0 0 0 1 0 0 3 0 0 16 0 1714.8672 O14734 O14734 294 309 ACOT8 Acyl-coenzyme A thioesterase 8 yes yes 2 8.2916E-06 139.19 By MS/MS 8 0 1 1 1016500 1016500 0 11257 122 11796 28041 19788 19788 0 67060 0 QDLADVVQVCEGK EREVKMGAKLLQDVRQDLADVVQVCEGKKK VRQDLADVVQVCEGKKKQTNYLRTLINELV R Q D G K K 1 0 0 2 1 2 1 1 0 0 1 1 0 0 0 0 0 0 0 3 0 0 13 0 1459.6977 Q14204 Q14204 4429 4441 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 3.4489E-26 250.51 By MS/MS 1.5 0.5 2 2 4 1924300 1924300 0 11258 1421 11797;11798 28042;28043;28044;28045 19789;19790;19791 19789 2 94483 0 QDLDRGLELISK ATTYVHKGLLQLQWKQDLDRGLELISKAIE QWKQDLDRGLELISKAIEIDNKCDFAYETM K Q D S K A 0 1 0 2 0 1 1 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 12 1 1385.7514 O94826 O94826 525 536 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2;3 1.3092E-06 203.03 By MS/MS 5.33 0.471 2 1 3 7738100 7738100 0 11259 353 11799 28046;28047;28048 19792;19793 19792 2 189520 0 QDLLNVLAR VCCEGMLIQLRFLKRQDLLNVLARMMRPVS LRFLKRQDLLNVLARMMRPVSDQVQIKVTM R Q D A R M 1 1 1 1 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 9 0 1040.5978 Q96A33 Q96A33 228 236 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 7.4942E-05 172.25 By MS/MS 6.29 1.03 2 2 2 1 7 7400700 7400700 0 11260 2114 11800;11801 28049;28050;28051;28052;28053;28054;28055 19794;19795 19795 1 79837 0 QDLLVASLFR AWNVLPRDLFQKLFRQDLLVASLFRNFLLA QKLFRQDLLVASLFRNFLLAERIMRSYNCT R Q D F R N 1 1 0 1 0 1 0 0 0 0 3 0 0 1 0 1 0 0 0 1 0 0 10 0 1160.6554 Q8N122 Q8N122 339 348 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.00087166 128.81 By MS/MS 3.33 0.471 2 1 3 289990 289990 0 11261 1891 11802;11803 28056;28057;28058 19796;19797;19798 19796 2 7641 0 QDLMNIAGTTLSSK LSSAVDHGSDEVKFRQDLMNIAGTTLSSKL RQDLMNIAGTTLSSKLLTHHKDHFTKLAVE R Q D S K L 1 0 1 1 0 1 0 1 0 1 2 1 1 0 0 2 2 0 0 0 0 0 14 0 1477.7446 P78371 P78371 157 170 CCT2 T-complex protein 1 subunit beta yes yes 2 9.4384E-13 211.83 By MS/MS By matching 6 0 4 3 1 32739000 32685000 54076 11262 1195 11804;11805;11806 28059;28060;28061;28062 19799;19800;19801 19800 945 2 254880 165850 QDLPGALSSNAIR EERLAGATLLIFANKQDLPGALSSNAIREV NKQDLPGALSSNAIREVLELDSIRSHHWCI K Q D I R E 2 1 1 1 0 1 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 0 13 0 1340.7048 P36404 P36404 127 139 ARL2 ADP-ribosylation factor-like protein 2 yes yes 2 0.0017522 132.03 By MS/MS 9.5 0.5 1 1 2 814310 814310 0 11263 802 11807 28063;28064 19802;19803 19802 2 585020 0 QDLPNAMNAAEITDK EDELRDAVLLVFANKQDLPNAMNAAEITDK QDLPNAMNAAEITDKLGLHSLRHRNWYIQA K Q D D K L 3 0 2 2 0 1 1 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 15 0 1629.7668 P84077;P61204 P84077 128 142 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 3.7452E-14 197.19 By MS/MS 9.5 0.5 2 2 4 1449800 1449800 0 11264 1093 11808;11809 28065;28066;28067;28068 19804;19805;19806 19806 859 3 975560 0 QDLTTALGLVK ISRILQHSHGIEEERQDLTTALGLVKELLS EEERQDLTTALGLVKELLSNVDEGIYQLEK R Q D V K E 1 0 0 1 0 1 0 1 0 0 3 1 0 0 0 0 2 0 0 1 0 0 11 0 1157.6656 Q92974 Q92974 413 423 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.0035999 133.23 By MS/MS 4 0 2 2 363520 363520 0 11265 2094 11810;11811 28069;28070 19807;19808 19807 1 9923.8 0 QDLTTLDVTK GGEAGVTLGQPHLSRQDLTTLDVTKLTPLS PHLSRQDLTTLDVTKLTPLSHEVISRQATI R Q D T K L 0 0 0 2 0 1 0 0 0 0 2 1 0 0 0 0 3 0 0 1 0 0 10 0 1132.5976 P41091;Q2VIR3 P41091 18 27 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 3.1275E-06 176.6 By MS/MS By MS/MS 5.67 3.68 1 1 1 2 1 535640 440720 94914 11266 836 11812 28071;28072;28073 19809;19810;19811 19811 3 297830 291090 QDNEQLAR VLLSDVFAQLQWCVKQDNEQLARSGTNCLE QLQWCVKQDNEQLARSGTNCLENLVISNGE K Q D A R S 1 1 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 972.46247 Q9Y6D5 Q9Y6D5 1438 1445 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.0066195 131.06 By MS/MS 2 0 1 1 198160 198160 0 11267 3002 11813 28074 19812 19812 1 9849.5 0 QDNESNVDPR GTGSDVDDDMSGDEKQDNESNVDPRDDVFG SGDEKQDNESNVDPRDDVFGYPQQFEDKPA K Q D P R D 0 1 2 2 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 10 0 1172.5058 Q93008 Q93008 1605 1614 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0013056 119.53 By MS/MS 1.5 0.5 1 1 2 284780 284780 0 11268 2096 11814 28075;28076 19813 19813 1 14127 0 QDQDAGTIER PDLLSYAAALQCMGRQDQDAGTIERCLEQM QCMGRQDQDAGTIERCLEQMSQEGLKLQAL R Q D E R C 1 1 0 2 0 2 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1131.5156 O00411 O00411 309 318 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0010272 121.6 By MS/MS 2 0.816 1 1 1 3 538340 538340 0 11269 92 11815 28077;28078;28079 19814 19814 1 16842 0 QDSINAYNEPNSTK YEYCRLDGQTPHDERQDSINAYNEPNSTKF RQDSINAYNEPNSTKFVFMLSTRAGGLGIN R Q D T K F 1 0 3 1 0 1 1 0 0 1 0 1 0 0 1 2 1 0 1 0 0 0 14 0 1579.7114 O60264 O60264 539 552 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.0019879 116.84 By MS/MS 3.5 0.5 1 1 2 508660 508660 0 11270 240 11816 28080;28081 19815 19815 1 13383 0 QDSLVINLNR KTREAEEKEKEGIVKQDSLVINLNRSNPKL EGIVKQDSLVINLNRSNPKLKDLYIRPNIA K Q D N R S 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1170.6357 Q9Y5B9 Q9Y5B9 648 657 SUPT16H FACT complex subunit SPT16 yes yes 2 0.00062746 139.98 By MS/MS 2 0.816 1 1 1 3 811510 811510 0 11271 2968 11817 28082;28083;28084 19816;19817 19816 2 28999 0 QDTFSGTGFFPLDR DQIVSKAAYVLFYQRQDTFSGTGFFPLDRE RQDTFSGTGFFPLDRETKGASAATGIPLES R Q D D R E 0 1 0 2 0 1 0 2 0 0 1 0 0 3 1 1 2 0 0 0 0 0 14 0 1586.7365 Q9Y4E8 Q9Y4E8 933 946 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.0010528 122.46 By MS/MS 4 0 1 1 345600 345600 0 11272 2953 11818 28085 19818 19818 1 9434.4 0 QDVLNWLNEEK LLLRLLTCIEPPQPRQDVLNWLNEEKIIQR PQPRQDVLNWLNEEKIIQRLVEIVHPSQEE R Q D E K I 0 0 2 1 0 1 2 0 0 0 2 1 0 0 0 0 0 1 0 1 0 0 11 0 1386.6779 Q5H9R7 Q5H9R7 180 190 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 2 2.2397E-49 303.71 By MS/MS 3.5 0.5 2 2 4 830220 830220 0 11273 1600 11819;11820 28086;28087;28088;28089 19819;19820;19821 19819 2 22177 0 QDVYDLLK GGSLGLGLAAMGTARQDVYDLLKTNLYQDD AAMGTARQDVYDLLKTNLYQDDAVTGEAAG R Q D L K T 0 0 0 2 0 1 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 8 0 992.51786 Q99460 Q99460 491 498 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.0018693 160.63 By MS/MS By matching 4.75 0.829 2 1 1 3 1 5783600 5769900 13729 11274 2268 11821 28090;28091;28092;28093 19822;19823 19822 2 155640 28687 QDVYGPQPQVR ERYRPSMEGYRAPSRQDVYGPQPQVRVGGS APSRQDVYGPQPQVRVGGSSVDLHRFHPEP R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 O60716 O60716 254 264 CTNND1 Catenin delta-1 yes yes 2 9.0828E-11 204.34 By MS/MS By matching 4 0 2 1 1 7532300 7502800 29500 11275 260 11822 28094;28095 19824 19824 1 204820 61643 QEAEIPGANLNVEGTSTPLLR ITTYSLVAKEIPTNKQEAEIPGANLNVEGT GANLNVEGTSTPLLRIAWARIILDEAHNVK K Q E L R I 2 1 2 0 0 1 3 2 0 1 3 0 0 0 2 1 2 0 0 1 0 0 21 0 2208.1386 Q9UNY4 Q9UNY4 708 728 TTF2 Transcription termination factor 2 yes yes 2 0.00012126 116.86 By MS/MS 3 0 1 1 298530 298530 0 11276 2848 11823 28096 19825 19825 1 7793.1 0 QEAIAQNR FIDSQRVWAEYALKRQEAIAQNRRLTLEDL AEYALKRQEAIAQNRRLTLEDLEDSWDRGI R Q E N R R 2 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 928.47264 Q6P2Q9 Q6P2Q9 1394 1401 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0079015 126.28 By MS/MS 2 0.816 1 1 1 3 653540 653540 0 11277 1706 11824 28097;28098;28099 19826 19826 1 30779 0 QEALIESLCEK MNSVVSLLLILEPDKQEALIESLCEKLVKF EPDKQEALIESLCEKLVKFREGERPSLRLQ K Q E E K L 1 0 0 0 1 1 3 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1318.6439 Q7L2H7 Q7L2H7 79 89 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.00058417 139.32 By MS/MS 7.5 0.5 1 1 2 2039700 2039700 0 11278 1764 11825 28100;28101 19827 19827 1 57889 0 QEARPEPAR KVENGQEPVIKLENRQEARPEPARLKPPVH IKLENRQEARPEPARLKPPVHYNGPSKAGY R Q E A R L 2 2 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 9 1 1052.5363 P55265 P55265 423 431 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 2 0.048137 112.41 By MS/MS 4 0 1 1 170690 170690 0 11279 1032 11826 28102 19828 19828 1 4659.6 0 QEDGSLCLVQFPSR NRDVQYRGRVRVQLKQEDGSLCLVQFPSRK KQEDGSLCLVQFPSRKSVMLYAAEMIPKLK K Q E S R K 0 1 0 1 1 2 1 1 0 0 2 0 0 1 1 2 0 0 0 1 0 0 14 0 1634.7723 P09132 P09132 88 101 SRP19 Signal recognition particle 19 kDa protein yes yes 2 0.0008801 147.58 By MS/MS 10 0 2 2 575660 575660 0 11280 512 11827;11828 28103;28104 19829;19830 19829 1 611870 0 QEDGSLCLVQFPSRK NRDVQYRGRVRVQLKQEDGSLCLVQFPSRK QEDGSLCLVQFPSRKSVMLYAAEMIPKLKT K Q E R K S 0 1 0 1 1 2 1 1 0 0 2 1 0 1 1 2 0 0 0 1 0 0 15 1 1762.8672 P09132 P09132 88 102 SRP19 Signal recognition particle 19 kDa protein yes yes 2 3.0123E-07 163.71 By MS/MS 10 0 1 1 0 0 0 11281 512 11829 28105 19831;19832 19832 0 0 0 QEDKDDLDVTELTNEDLLDQLVK AAVGRKATKKTDKPRQEDKDDLDVTELTNE VTELTNEDLLDQLVKYGVNPGPIVGTTRKL R Q E V K Y 0 0 1 6 0 2 3 0 0 0 5 2 0 0 0 0 2 0 0 2 0 0 23 1 2687.3025 P42166;P42167 P42167 104 126 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2;3 1.1229E-20 185.74 By MS/MS 6 0 2 2 5270600 5270600 0 11282 846;845 11830;11831 28106;28107 19833;19834 19834 1 41101 0 QEDSGLRDHSVR FVVRTMCAVLGLVARQEDSGLRDHSVRVLI VARQEDSGLRDHSVRVLISNHVTPFDHNIV R Q E V R V 0 2 0 2 0 1 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 0 12 1 1397.6648 Q9Y679 Q9Y679 79 90 AUP1 Ancient ubiquitous protein 1 yes yes 3 0.036844 65.179 By MS/MS 7 0 1 1 6602900 6602900 0 11283 2997 11832 28108 19835 19835 1 117990 0 QEDVIATANLSR TMATAKAVAAGNSCRQEDVIATANLSRRAI SCRQEDVIATANLSRRAIADMLRACKEAAY R Q E S R R 2 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1315.6732 Q9Y490;Q9Y4G6 Q9Y490 2198 2209 TLN1;TLN2 Talin-1;Talin-2 yes no 2 4.0972E-24 245.13 By MS/MS 2.33 0.471 2 1 3 2001700 2001700 0 11284 2947 11833;11834 28109;28110;28111 19836;19837 19836 1 88006 0 QEEAEDPACIPIFWVSK HSVNASKPSERGLVRQEEAEDPACIPIFWV EAEDPACIPIFWVSKWVDYSDKYGLGYQLC R Q E S K W 2 0 0 1 1 1 3 0 0 2 0 1 0 1 2 1 0 1 0 1 0 0 17 0 2017.9455 P53350 P53350 397 413 PLK1 Serine/threonine-protein kinase PLK1 yes yes 2 3.6744E-43 252.43 By MS/MS 6 0 1 1 783900 783900 0 11285 998 11835 28112 19838 19838 1 6112.9 0 QEEALAEFLQR QSYFEEIALKFLEARQEEALAEFLQRKLAS LEARQEEALAEFLQRKLASLKPAERTQATL R Q E Q R K 2 1 0 0 0 2 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 11 0 1332.6674 Q9P253 Q9P253 465 475 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 2 0.00010604 160.91 By MS/MS 5 0.816 1 1 1 3 4375800 4375800 0 11286 2734 11836 28113;28114;28115 19839 19839 1 47857 0 QEEDNLLIER SETLYELLQLGWEERQEEDNLLIERILLLV GWEERQEEDNLLIERILLLVRNILHVPADL R Q E E R I 0 1 1 1 0 1 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 10 0 1257.6201 Q9UNS1 Q9UNS1 149 158 TIMELESS Protein timeless homolog yes yes 2 0.044589 80.231 By MS/MS 3 0 1 1 398500 398500 0 11287 2846 11837 28116 19840 19840 1 10403 0 QEEDSYEIFICHANVIR IEAAFRNYIHRADARQEEDSYEIFICHANV EDSYEIFICHANVIRYIVCRALQFPPEGWL R Q E I R Y 1 1 1 1 1 1 3 0 1 3 0 0 0 1 0 1 0 0 1 1 0 0 17 0 2121.979 Q96HS1 Q96HS1 219 235 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 0.002819 104.55 By MS/MS 8 0 1 1 2062700 2062700 0 11288 2196 11838 28117 19841 19841 1 136070 0 QEEEARR LALALRVSMEEQRQRQEEEARRAAAASAAE SMEEQRQRQEEEARRAAAASAAEAGIATTG R Q E R R A 1 2 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 916.43626 P55036;Q9NQS7 P55036 231 237 PSMD4;INCENP 26S proteasome non-ATPase regulatory subunit 4;Inner centromere protein yes no 2 0.027944 166.78 By MS/MS 6 0 1 1 227550 227550 0 11289 1023 11839 28118 19842 19842 1 1774.4 0 QEEIPVVIAASEDR IDFVPNALRHAVDGRQEEIPVVIAASEDRL RQEEIPVVIAASEDRLGGAIAAINSIQHNT R Q E D R L 2 1 0 1 0 1 3 0 0 2 0 0 0 0 1 1 0 0 0 2 0 0 14 0 1554.789 Q68CQ7 Q68CQ7 63 76 GLT8D1 Glycosyltransferase 8 domain-containing protein 1 yes yes 2 1.0983E-05 180.24 By MS/MS 7 0 2 2 944940 944940 0 11290 1671 11840;11841 28119;28120 19843;19844 19843 1 16886 0 QEELWSPADVGPK Q E P K 1 0 0 1 0 1 2 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 13 0 1454.7042 REV__P53367 yes yes 2 0.0079099 83.862 By MS/MS 4 0 1 1 0 0 0 + 11291 3026 11842 28121 19845 19845 0 0 0 QEFEKQDELKR LRATCTTKVKANSVKQEFEKQDELKRSAMR NSVKQEFEKQDELKRSAMRAVAALLTIPEA K Q E K R S 0 1 0 1 0 2 3 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 11 2 1448.726 O75155;Q86VP6 Q86VP6 1164 1174 CAND2;CAND1 Cullin-associated NEDD8-dissociated protein 2;Cullin-associated NEDD8-dissociated protein 1 no no 3 0.0011323 94.82 By MS/MS 3.8 0.748 2 2 1 5 1540000 1540000 0 11292 1829;286 11843;11844 28122;28123;28124;28125;28126 19846;19847;19848 19846 2 42040 0 QEGIIFIGPPPSAIR CGFLSENMEFAELCKQEGIIFIGPPPSAIR QEGIIFIGPPPSAIRDMGIKSTSKSIMAAA K Q E I R D 1 1 0 0 0 1 1 2 0 4 0 0 0 1 3 1 0 0 0 0 0 0 15 0 1593.8879 Q96RQ3 Q96RQ3 144 158 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 0.0061552 94.538 By MS/MS 5 0 2 2 1009900 1009900 0 11293 2249 11845;11846 28127;28128 19849;19850 19850 1 41513 0 QEGLTFFGTELAPVR YRAPQGCSGVDECARQEGLTFFGTELAPVR QEGLTFFGTELAPVRQQELASLLRTYLARL R Q E V R Q 1 1 0 0 0 1 2 2 0 0 2 0 0 2 1 0 2 0 0 1 0 0 15 0 1663.857 Q96AQ6 Q96AQ6 597 611 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes yes 2 0.02953 76.332 By MS/MS 4 0 1 1 183050 183050 0 11294 2122 11847 28129 19851 19851 1 4997.1 0 QEIFQEQLAAVPEFR PITAVKQPEKVAATRQEIFQEQLAAVPEFR QEIFQEQLAAVPEFRGLGPLFKSSPEPVAL R Q E F R G 2 1 0 0 0 3 3 0 0 1 1 0 0 2 1 0 0 0 0 1 0 0 15 0 1803.9155 Q9Y678 Q9Y678 610 624 COPG1 Coatomer subunit gamma-1 yes yes 2;3 7.9349E-10 183.06 By MS/MS 4.4 0.49 3 2 5 2993000 2993000 0 11295 2996 11848;11849 28130;28131;28132;28133;28134 19852;19853;19854;19855 19852 3 85369 0 QEIGNLDKHEELEELVAR AKVLEEYGAGVCSTRQEIGNLDKHEELEEL GNLDKHEELEELVARFLGVEAAMAYGMGFA R Q E A R F 1 1 1 1 0 1 5 1 1 1 3 1 0 0 0 0 0 0 0 1 0 0 18 1 2121.0702 O15270 O15270 208 225 SPTLC2 Serine palmitoyltransferase 2 yes yes 3 0.0028215 93.768 By MS/MS 6 0 1 1 6556200 6556200 0 11296 166 11850 28135 19856 19856 1 51126 0 QEILAFEGHLAAASTK TEMLNRELQTAQREKQEILAFEGHLAAAST EILAFEGHLAAASTKQTITESSSLLLSQLT K Q E T K Q 4 0 0 0 0 1 2 1 1 1 2 1 0 1 0 1 1 0 0 0 0 0 16 0 1684.8784 Q8N201 Q8N201 804 819 INTS1 Integrator complex subunit 1 yes yes 2 0.042953 68.355 By MS/MS 4 0.816 1 1 1 3 3203800 3203800 0 11297 1903 11851 28136;28137;28138 19857 19857 1 88144 0 QEILEQVLNR ANILLETFKIHEMIRQEILEQVLNRVVTRA HEMIRQEILEQVLNRVVTRASSPISHFLDL R Q E N R V 0 1 1 0 0 2 2 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1240.6776 Q9NVI1 Q9NVI1 438 447 FANCI Fanconi anemia group I protein yes yes 2 1.1096E-10 205.83 By MS/MS 3 0 1 1 1290300 1290300 0 11298 2654 11852 28139 19858 19858 1 33683 0 QEIQHLFR EAPSTVLSQNLFTPKQEIQHLFREPEKRPP QNLFTPKQEIQHLFREPEKRPPTVVSNTFT K Q E F R E 0 1 0 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 1069.5669 P04844 P04844 524 531 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 0.0060373 134.81 By MS/MS 1 0 2 2 619000 619000 0 11299 459 11853;11854 28140;28141 19859;19860 19859 1 30243 0 QEKMSIYQAMWK CIAGVLVPAKDQPGRQEKMSIYQAMWKGVL PGRQEKMSIYQAMWKGVLRPGTALVLLEAQ R Q E W K G 1 0 0 0 0 2 1 0 0 1 0 2 2 0 0 1 0 1 1 0 0 0 12 1 1541.7371 P58107 P58107 2240 2251 EPPK1 Epiplakin yes no 3 0.039499 54.784 By MS/MS 8 0 1 1 728950 728950 0 11300 1059 11855 28142 19861 19861 823;824 1 48089 0 QELAVFCSPEPPAK TKGTRALEATTEHIRQELAVFCSPEPPAKT RQELAVFCSPEPPAKTSTPEDFIRMTKGIT R Q E A K T 2 0 0 0 1 1 2 0 0 0 1 1 0 1 3 1 0 0 0 1 0 0 14 0 1571.7654 Q9Y490 Q9Y490 2155 2168 TLN1 Talin-1 yes yes 2 0.0023383 115.34 By MS/MS 2 0 1 1 239090 239090 0 11301 2947 11856 28143 19862 19862 1 11884 0 QELGICPAVK ALAVLSTELAVRKLRQELGICPAVKQIDTV VRKLRQELGICPAVKQIDTVAAEWPAQTNY R Q E V K Q 1 0 0 0 1 1 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 10 0 1113.5852 P27708 P27708 892 901 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.3127E-06 178.94 By MS/MS 2 0.816 1 1 1 3 1530500 1530500 0 11302 709 11857 28144;28145;28146 19863;19864 19863 2 68202 0 QELILSNSEDK RGHYNNVSCAVFHPRQELILSNSEDKSIRV FHPRQELILSNSEDKSIRVWDMSKRTGVQT R Q E D K S 0 0 1 1 0 1 2 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 11 0 1274.6354 P53621 P53621 261 271 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 2.8748E-07 222.28 By MS/MS 2 0.816 1 1 1 3 4992900 4992900 0 11303 1005 11858 28147;28148;28149 19865;19866;19867;19868 19867 4 170420 0 QELILSNSEDKSIR RGHYNNVSCAVFHPRQELILSNSEDKSIRV RQELILSNSEDKSIRVWDMSKRTGVQTFRR R Q E I R V 0 1 1 1 0 1 2 0 0 2 2 1 0 0 0 3 0 0 0 0 0 0 14 1 1630.8526 P53621 P53621 261 274 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0013923 150.14 By MS/MS 1 0 1 1 0 0 0 11304 1005 11859 28150 19869 19869 0 0 0 QELQEVVEFLKNPQK KNVTFEHVKGVEEAKQELQEVVEFLKNPQK QELQEVVEFLKNPQKFTILGGKLPKGILLV K Q E Q K F 0 0 1 0 0 3 3 0 0 0 2 2 0 1 1 0 0 0 0 2 0 0 15 1 1827.9731 Q96TA2 Q96TA2 349 363 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 6.9866E-05 154.23 By MS/MS 6 0 1 1 0 0 0 11305 2263 11860 28151 19870 19870 0 0 0 QELSFAAR AAVDLIIKSHQGLDRQELSFAARSFYYKLR SHQGLDRQELSFAARSFYYKLRAAEQYTPK R Q E A R S 2 1 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 920.47158 P49327 P49327 2414 2421 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.019809 107.01 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 10360000 10360000 0 11306 915 11861 28152;28153;28154;28155;28156;28157 19871 19871 1 398810 0 QELSHALYQHDAACR MLHSFTLRQQLQTTRQELSHALYQHDAACR QELSHALYQHDAACRVIARLTKEVTAAREA R Q E C R V 3 1 0 1 1 2 1 0 2 0 2 0 0 0 0 1 0 0 1 0 0 0 15 0 1797.8217 Q9UMS4 Q9UMS4 101 115 PRPF19 Pre-mRNA-processing factor 19 yes yes 3 0.0030191 100.11 By MS/MS 6 0 1 1 7945600 7945600 0 11307 2834 11862 28158 19872 19872 1 61960 0 QELVLNQLIK DFDLQIAKQDYYTARQELVLNQLIKQKASF YYTARQELVLNQLIKQKASFELLQLSYEIE R Q E I K Q 0 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 0 0 1 0 0 10 0 1196.7129 Q68CZ6 Q68CZ6 370 379 HAUS3 HAUS augmin-like complex subunit 3 yes yes 2 0.002606 152.06 By MS/MS 5 0 2 2 0 0 0 11308 1672 11863;11864 28159;28160 19873;19874 19874 1 0 0 QEPLLIGSTK PQELNGITRALCATRQEPLLIGSTKSNMGH LCATRQEPLLIGSTKSNMGHPEPASGLAAL R Q E T K S 0 0 0 0 0 1 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 0 10 0 1084.6128 P49327 P49327 317 326 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00093833 132.88 By MS/MS By matching 3.29 1.67 1 2 1 1 1 1 6 1 29334000 29285000 48833 11309 915 11865 28161;28162;28163;28164;28165;28166;28167 19875;19876;19877 19877 3 1099500 41112 QEPSDSPMFIINR EPNNLNSKIAFKIIRQEPSDSPMFIINRNT IRQEPSDSPMFIINRNTGEIRTMNNFLDRE R Q E N R N 0 1 1 1 0 1 1 0 0 2 0 0 1 1 2 2 0 0 0 0 0 0 13 0 1532.7293 Q02413 Q02413 201 213 DSG1 Desmoglein-1 yes yes 2 0.05334 63.408 By matching By MS/MS 8.5 0.5 1 1 1 1 161200 126300 34900 11310 1253 11866 28168;28169 19878 19878 0 72487 297740 QEQIPLTYIVEK NITKKQKMDTLPIQKQEQIPLTYIVEKRTG IQKQEQIPLTYIVEKRTGS___________ K Q E E K R 0 0 0 0 0 2 2 0 0 2 1 1 0 0 1 0 1 0 1 1 0 0 12 0 1459.7922 Q96E52 Q96E52 509 520 OMA1 Metalloendopeptidase OMA1, mitochondrial yes yes 2 0.001332 143 By MS/MS 7.5 0.5 1 1 2 966020 966020 0 11311 2159 11867 28170;28171 19879 19879 1 22450 0 QEQLYLGLFNR PPKKDRIELCAMSEKQEQLYLGLFNRLKKS MSEKQEQLYLGLFNRLKKSINNLEKNTEMC K Q E N R L 0 1 1 0 0 2 1 1 0 0 3 0 0 1 0 0 0 0 1 0 0 0 11 0 1379.7197 Q9H4L7 Q9H4L7 747 757 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 0.00010969 160.36 By MS/MS 3 0 1 1 184070 184070 0 11312 2502 11868 28172 19880 19880 1 4805.1 0 QEQNQEQPIR ______________________________ ______________________________ - Q E I R C 0 1 1 0 0 4 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 10 0 1268.6109 CON__P02668 CON__P02668 1 10 yes yes 2 0.000307 145.9 By MS/MS By MS/MS 7.67 1.7 1 1 2 1 1 5 1 0 0 0 + 11313 40 11869 28173;28174;28175;28176;28177;28178 19881;19882;19883 19883 0 0 0 QEQNQEQPIRCEK ______________________________ ______________________________ - Q E E K D 0 1 1 0 1 4 3 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 13 1 1685.7791 CON__P02668 CON__P02668 1 13 yes yes 2 6.6472E-25 250.26 By MS/MS 5 0 1 1 0 0 0 + 11314 40 11870 28179 19884 19884 0 0 0 QEQNQEQPIRCEKDER ______________________________ EQNQEQPIRCEKDERFFSDKIAKYIPIQYV - Q E E R F 0 2 1 1 1 4 4 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 16 2 2085.9498 CON__P02668 CON__P02668 1 16 yes yes 3 0.00055923 115.09 By MS/MS 6 0.816 1 1 1 3 0 0 0 + 11315 40 11871 28180;28181;28182 19885 19885 0 0 0 QESTSVLLQQSEK IDKPPGMAEKWKIARQESTSVLLQQSEKKL ARQESTSVLLQQSEKKLGRSEIQFLISDNQ R Q E E K K 0 0 0 0 0 3 2 0 0 0 2 1 0 0 0 3 1 0 0 1 0 0 13 0 1475.7468 Q14126 Q14126 549 561 DSG2 Desmoglein-2 yes yes 2 0.044707 73.951 By MS/MS 3 0 1 1 639290 639290 0 11316 1407 11872 28183 19886 19886 1 16689 0 QETGTEFSQELR RQSTCYKGLRRLLSKQETGTEFSQELRQLV LSKQETGTEFSQELRQLVGLLSPMVYQEVE K Q E L R Q 0 1 0 0 0 2 3 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 12 0 1423.6579 Q15051 Q15051 264 275 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.020056 85.813 By MS/MS 5 0 1 1 806260 806260 0 11317 1472 11873 28184 19887 19887 1 33141 0 QETHQQLADK NMLSLTQGLFRGLSRQETHQQLADKKGLHV RGLSRQETHQQLADKKGLHVVEIREECGPL R Q E D K K 1 0 0 1 0 3 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1196.5786 P82675 P82675 356 365 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.006184 96.171 By MS/MS 7 0 2 2 333460 333460 0 11318 1205 11874;11875 28185;28186 19888;19889 19889 1 5959.1 0 QETHQQLADKK NMLSLTQGLFRGLSRQETHQQLADKKGLHV GLSRQETHQQLADKKGLHVVEIREECGPLP R Q E K K G 1 0 0 1 0 3 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 11 1 1324.6735 P82675 P82675 356 366 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2;3 2.3529E-05 172.21 By MS/MS By matching 7.57 0.728 4 2 1 6 1 3188200 3185400 2771.3 11319 1205 11876;11877 28187;28188;28189;28190;28191;28192;28193 19890;19891;19892 19892 2 81961 11377 QETSSLACGLR WKAGFKGKSKPNLLKQETSSLACGLRILFR NLLKQETSSLACGLRILFRMYMDESRVSAW K Q E L R I 1 1 0 0 1 1 1 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1220.5819 Q9Y6D6 Q9Y6D6 1722 1732 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.022988 89.08 By MS/MS 2 0 1 1 0 0 0 11320 3003 11878 28194 19893 19893 1 0 0 QEVPIIIVFR SAIGQRIVATLPYIKQEVPIIIVFRALGFV LPYIKQEVPIIIVFRALGFVSDRDILEHII K Q E F R A 0 1 0 0 0 1 1 0 0 3 0 0 0 1 1 0 0 0 0 2 0 0 10 0 1212.723 P30876 P30876 265 274 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.0001244 162.88 By MS/MS 3.5 0.5 1 1 2 486470 486470 0 11321 748 11879 28195;28196 19894 19894 1 12850 0 QEVVDLLLAR RTKDTPLSLACSGGRQEVVDLLLARGANKE CSGGRQEVVDLLLARGANKEHRNVSDYTPL R Q E A R G 1 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 10 0 1154.6659 Q8IWZ3 Q8IWZ3 1135 1144 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 0.00087616 128.6 By MS/MS 2 0.816 2 2 2 6 490100 490100 0 11322 1868 11880;11881 28197;28198;28199;28200;28201;28202 19895;19896;19897;19898 19896 3 19481 0 QEVVELLLAR RTKDTPLSLACSGGRQEVVELLLARGANKE CSGGRQEVVELLLARGANKEHRNVSDYTPL R Q E A R G 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 10 0 1168.6816 O75179 O75179 1163 1172 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 2.1227E-07 192.91 By MS/MS 2.25 0.829 1 1 2 4 585270 585270 0 11323 290 11882;11883 28203;28204;28205;28206 19899;19900 19899 1 17747 0 QEYDESGPSIVHR ILASLSTFQQMWISKQEYDESGPSIVHRKC SKQEYDESGPSIVHRKCF____________ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;Q9BYX7;P63261 P60709 360 372 ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2;3 8.3814E-05 170.4 By MS/MS By MS/MS 7.4 1.2 2 5 1 1 1 7 3 42594000 42496000 97990 11324 1072;1179 11884;11885 28207;28208;28209;28210;28211;28212;28213;28214;28215;28216 19901;19902;19903;19904 19902 2 1035800 369790 QEYEQLIAK VAPGKDLTKTLNDMRQEYEQLIAKNRKDIE TLNDMRQEYEQLIAKNRKDIENQYETQITQ R Q E A K N 1 0 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1120.5764 P35527;CON__P35527 P35527 328 336 KRT9 Keratin, type I cytoskeletal 9 yes no 2 1.5424E-06 190.26 By MS/MS By MS/MS 4.54 2.13 2 3 2 3 1 1 1 4 9 5519100 2118800 3400300 + 11325 791 11886;11887 28217;28218;28219;28220;28221;28222;28223;28224;28225;28226;28227;28228;28229 19905;19906;19907;19908;19909;19910;19911;19912;19913;19914 19905 3 70030 4042600 QEYLDTLYR GRMLFDYLADKHGFRQEYLDTLYRYAKFQY DKHGFRQEYLDTLYRYAKFQYECGNYSGAA R Q E Y R Y 0 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 9 0 1199.5823 P60228 P60228 125 133 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0348 88.37 By MS/MS 6.5 0.5 1 1 2 13937000 13937000 0 11326 1065 11888 28230;28231 19915 19915 1 123470 0 QFAALVASK DKIEVLYEDEGFRSRQFAALVASKVFYHLG EGFRSRQFAALVASKVFYHLGAFEESLNYA R Q F S K V 3 0 0 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 9 0 933.52837 Q99460 Q99460 58 66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.019703 91.867 By MS/MS 4 0 1 1 0 0 0 11327 2268 11889 28232 19916 19916 0 0 0 QFAEMYVAK VGFGSGLHGWAFTLKQFAEMYVAKFAAKGE WAFTLKQFAEMYVAKFAAKGEGQLGPAERA K Q F A K F 2 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 1 1 0 0 9 0 1085.5216 P13639 P13639 227 235 EEF2 Elongation factor 2 yes yes 2 0.010364 110.12 By MS/MS 4.5 0.5 3 3 6 6285000 6285000 0 11328 576 11890;11891;11892 28233;28234;28235;28236;28237;28238 19917;19918;19919 19918 370 2 181090 0 QFAYQNSWGLTTR MFEIVFEDPKIPGEKQFAYQNSWGLTTRTI EKQFAYQNSWGLTTRTIGVMTMVHGDNMGL K Q F T R T 1 1 1 0 0 2 0 1 0 0 1 0 0 1 0 1 2 1 1 0 0 0 13 0 1570.7528 P07814 P07814 1266 1278 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0025481 100.69 By MS/MS 3 0 1 1 0 0 0 11329 493 11893 28239 19920 19920 0 0 0 QFCLELNGLAVK PEGQDEGVWKYEHLRQFCLELNGLAVKLQS HLRQFCLELNGLAVKLQSECHPDTCTQMTA R Q F V K L 1 0 1 0 1 1 1 1 0 0 3 1 0 1 0 0 0 0 0 1 0 0 12 0 1390.7279 Q9Y3A3 Q9Y3A3 76 87 MOB4 MOB-like protein phocein yes yes 2 0.0084844 85.958 By MS/MS 9 0 1 1 0 0 0 11330 2921 11894 28240 19921 19921 0 0 0 QFCTGEFRK ELFADVVPKTAENFRQFCTGEFRKDGVPIG TAENFRQFCTGEFRKDGVPIGYKGSTFHRV R Q F R K D 0 1 0 0 1 1 1 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 9 1 1171.5444 O43447 O43447 45 53 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 2 0.053548 60.436 By MS/MS 10 0 1 1 0 0 0 11331 201 11895 28241 19922 19922 0 0 0 QFEDELHPDLK DPTGTGRGGASIYGKQFEDELHPDLKFTGA IYGKQFEDELHPDLKFTGAGILAMANAGPD K Q F L K F 0 0 0 2 0 1 2 0 1 0 2 1 0 1 1 0 0 0 0 0 0 0 11 0 1369.6514 Q9Y3C6 Q9Y3C6 81 91 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 2 0.015631 80.245 By MS/MS 10 0 1 1 0 0 0 11332 2928 11896 28242 19923 19923 0 0 0 QFESLPATHIR QQRHQLKHRELFLSRQFESLPATHIRGKCS FLSRQFESLPATHIRGKCSVTLLNETDILS R Q F I R G 1 1 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 11 0 1297.6779 O94776 O94776 93 103 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.0023074 105.98 By MS/MS 5 0 1 1 0 0 0 11333 349 11897 28243 19924 19924 0 0 0 QFGPTFALDTVHVDPVIR RNLAEWFSRLPREERQFGPTFALDTVHVDP PTFALDTVHVDPVIRESTPDELLRPPAELA R Q F I R E 1 1 0 2 0 1 0 1 1 1 1 0 0 2 2 0 2 0 0 3 0 0 18 0 2011.0527 Q86UT6 Q86UT6 99 116 NLRX1 NLR family member X1 yes yes 2 0.0027656 126.56 By MS/MS 4 0 1 1 0 0 0 11334 1825 11898 28244 19925 19925 0 0 0 QFHHQLR MAAHESDARRRMISKQFHHQLRVGERQPLL ARRRMISKQFHHQLRVGERQPLLGPPESMR K Q F L R V 0 1 0 0 0 2 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 964.49913 Q99613;B5ME19 Q99613 713 719 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.017095 94.407 By MS/MS 4 0 2 2 0 0 0 11335 2275 11899 28245;28246 19926;19927 19927 0 0 0 QFIAAQGSSR VRGVLRRGMTVEGLKQFIAAQGSSRSVVNM VEGLKQFIAAQGSSRSVVNMEWDKIWAFNK K Q F S R S 2 1 0 0 0 2 0 1 0 1 0 0 0 1 0 2 0 0 0 0 0 0 10 0 1063.5411 P07814 P07814 473 482 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0006717 138.08 By MS/MS 3 0.707 1 2 1 4 8466100 8466100 0 11336 493 11900;11901 28247;28248;28249;28250 19928;19929;19930 19928 2 224520 0 QFILVMNALDNR HDSIMNPDYNVEFFRQFILVMNALDNRAAR FFRQFILVMNALDNRAARNHVNRMCLAADV R Q F N R A 1 1 2 1 0 1 0 0 0 1 2 0 1 1 0 0 0 0 0 1 0 0 12 0 1432.7497 Q9UBT2 Q9UBT2 108 119 UBA2 SUMO-activating enzyme subunit 2 yes yes 2 0.0026943 116.77 By MS/MS 4 0 1 1 0 0 0 11337 2757 11902 28251 19931;19932 19931 1610 0 0 0 QFINLMLPMK QFLPVPELMPFRLTRQFINLMLPMKETGLM FRLTRQFINLMLPMKETGLMYSIMVHALRA R Q F M K E 0 0 1 0 0 1 0 0 0 1 2 1 2 1 1 0 0 0 0 0 0 0 10 0 1233.6614 P78527 P78527 3966 3975 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.011147 84.498 By MS/MS 2.5 1.12 1 1 1 1 4 0 0 0 11338 1197 11903 28252;28253;28254;28255 19933 19933 973;974 0 0 0 QFIQGPPEVIR SDETKSLEEAQEWLKQFIQGPPEVIRALKK EWLKQFIQGPPEVIRALKKSVCSGRELYLE K Q F I R A 0 1 0 0 0 2 1 1 0 2 0 0 0 1 2 0 0 0 0 1 0 0 11 0 1282.7034 Q9NTX5 Q9NTX5 251 261 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 0.0082638 89.886 By MS/MS 8 0 1 1 0 0 0 11339 2633 11904 28256 19934 19934 0 0 0 QFITILEATHR ACLRGIGRWTNPQYRQFITILEATHRNQSS PQYRQFITILEATHRNQSSENKRQLANYNF R Q F H R N 1 1 0 0 0 1 1 0 1 2 1 0 0 1 0 0 2 0 0 0 0 0 11 0 1327.7248 O95870 O95870 126 136 ABHD16A Abhydrolase domain-containing protein 16A yes yes 2 0.00067499 145.46 By MS/MS 6 0 1 1 0 0 0 11340 412 11905 28257 19935 19935 0 0 0 QFLDFGSSNACEK IEHFSKFSPSPLSMKQFLDFGSSNACEKTS MKQFLDFGSSNACEKTSFTFLRQELPVRLA K Q F E K T 1 0 1 1 1 1 1 1 0 0 1 1 0 2 0 2 0 0 0 0 0 0 13 0 1501.6507 Q15119 Q15119 35 47 PDK2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes yes 2 1.2442E-07 184.98 By MS/MS 7 0 2 2 1337400 1337400 0 11341 1480 11906;11907 28258;28259 19936;19937 19936 1 23900 0 QFLDFGSVNACEK VDFYARFSPSPLSMKQFLDFGSVNACEKTS MKQFLDFGSVNACEKTSFMFLRQELPVRLA K Q F E K T 1 0 1 1 1 1 1 1 0 0 1 1 0 2 0 1 0 0 0 1 0 0 13 0 1513.6871 Q15118 Q15118 61 73 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 1.466E-12 212.68 By MS/MS 7 0 2 2 1447600 1447600 0 11342 1479 11908;11909 28260;28261 19938;19939;19940 19938 1 25868 0 QFLESSELPR RTVKHPTLLQDPDLRQFLESSELPRAVNTQ DPDLRQFLESSELPRAVNTQALSGAGILRM R Q F P R A 0 1 0 0 0 1 2 0 0 0 2 0 0 1 1 2 0 0 0 0 0 0 10 0 1204.6088 O60749 O60749 260 269 SNX2 Sorting nexin-2 yes yes 2 0.0038962 111.06 By MS/MS 5 0 1 1 1407700 1407700 0 11343 262 11910 28262 19941 19941 1 57864 0 QFLPFLQR IHRVADISGDTQKAKQFLPFLQRAGRSEAV GDTQKAKQFLPFLQRAGRSEAVVEYVFSGS K Q F Q R A 0 1 0 0 0 2 0 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 8 0 1047.5866 Q7KZF4 Q7KZF4 516 523 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.048741 73.975 By MS/MS 4 0 1 1 0 0 0 11344 1757 11911 28263 19942 19942 0 0 0 QFLTQLMQK DVVKLTAQFVARNGRQFLTQLMQKEQRNYQ VARNGRQFLTQLMQKEQRNYQFDFLRPQHS R Q F Q K E 0 0 0 0 0 3 0 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 9 0 1135.606 Q15459 Q15459 180 188 SF3A1 Splicing factor 3A subunit 1 yes yes 2 0.022777 76.221 By MS/MS 4 0 1 1 0 0 0 11345 1504 11912 28264 19943 19943 0 0 0 QFNDEETLLQPPLTR EFLQLHLESVEELKKQFNDEETLLQPPLTR QFNDEETLLQPPLTRSMTVGGAFHTTEAEA K Q F T R S 0 1 1 1 0 2 2 0 0 0 3 0 0 1 2 0 2 0 0 0 0 0 15 0 1799.9054 P56962 P56962 119 133 STX17 Syntaxin-17 yes yes 2 6.3809E-06 151.99 By MS/MS 7.5 0.5 1 1 2 1409000 1409000 0 11346 1051 11913 28265;28266 19944 19944 1 90130 0 QFPFLASNYEVIMK EDGLDIPKTQFLQPKQFPFLASNYEVIMKS KQFPFLASNYEVIMKSQHLHEVLSRADPKK K Q F M K S 1 0 1 0 0 1 1 0 0 1 1 1 1 2 1 1 0 0 1 1 0 0 14 0 1685.8487 O95602 O95602 1036 1049 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.011188 91.701 By MS/MS 2.5 0.5 1 1 2 0 0 0 11347 401 11914 28267;28268 19945;19946 19946 212 0 0 0 QFQSILQER NGKICKQFRMKQASRQFQSILQERQSLPAW MKQASRQFQSILQERQSLPAWEERETILNL R Q F E R Q 0 1 0 0 0 3 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1147.5986 Q6P158 Q6P158 533 541 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.013786 100.25 By MS/MS 3 0 1 1 578810 578810 0 11348 1698 11915 28269 19947 19947 1 15110 0 QFSSADEAALKEPIIK VLATITKDQRAREGKQFSSADEAALKEPII FSSADEAALKEPIIKKFEEEGNPYYSSARV K Q F I K K 3 0 0 1 0 1 2 0 0 2 1 2 0 1 1 2 0 0 0 0 0 0 16 1 1745.92 Q9HCC0 Q9HCC0 496 511 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.00092263 115.09 By MS/MS 6.5 0.5 1 1 2 0 0 0 11349 2559 11916 28270;28271 19948 19948 0 0 0 QFSSSYLSR ______________________________ ______________________________ R Q F S R S 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 0 9 0 1073.5142 P35527;CON__P35527 P35527 5 13 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0037904 107.21 By MS/MS By MS/MS 4.38 2.23 1 1 1 1 2 1 1 2 6 0 0 0 + 11350 791 11917 28272;28273;28274;28275;28276;28277;28278;28279 19949;19950;19951;19952;19953;19954;19955 19955 0 0 0 QFSYLIENMAR MAYRKGIILFISRNRQFSYLIENMARDCGE SRNRQFSYLIENMARDCGEYAHTRYFRGGM R Q F A R D 1 1 1 0 0 1 1 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 11 0 1370.6653 Q9Y399 Q9Y399 150 160 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 1.9503E-07 190.57 By MS/MS 8 0 3 3 3310100 3310100 0 11351 2920 11918;11919;11920 28280;28281;28282 19956;19957;19958 19956 1681 2 218370 0 QFTSSSSIKGSSGLGGGSSR ______________________________ SSIKGSSGLGGGSSRTSCRLSGGLGAGSCR R Q F S R T 0 1 0 0 0 1 0 5 0 1 1 1 0 1 0 8 1 0 0 0 0 0 20 1 1885.913 CON__Q04695;Q04695;CON__Q9QWL7 CON__Q04695 7 26 KRT17 Keratin, type I cytoskeletal 17 yes no 2 5.2202E-08 157.37 By MS/MS 2.5 1.12 1 1 1 1 4 0 0 0 + 11352 54 11921 28283;28284;28285;28286 19959;19960;19961;19962;19963;19964 19961 0 0 0 QFTSSSSMKGSCGIGGGIGGGSSR ______________________________ GSCGIGGGIGGGSSRISSVLAGGSCRAPST R Q F S R I 0 1 0 0 1 1 0 8 0 2 0 1 1 1 0 7 1 0 0 0 0 0 24 1 2261.0165 CON__P02533;P02533;CON__P08779;P08779 CON__P02533 7 30 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.033265 53.008 By MS/MS 4 0 1 1 0 0 0 + 11353 35;47 11922 28287 19965 19965 16 0 0 0 QFVESLLPGNLVEK KISFFHNAVVRENLRQFVESLLPGNLVEKV RQFVESLLPGNLVEKVTNKNYVRFLSGWQQ R Q F E K V 0 0 1 0 0 1 2 1 0 0 3 1 0 1 1 1 0 0 0 2 0 0 14 0 1571.8559 Q9Y2G8 Q9Y2G8 240 253 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 2 0.012502 90.731 By MS/MS 4.5 0.5 1 1 2 521780 521780 0 11354 2885 11923 28288;28289 19966 19966 1 19076 0 QFVFDLHSGK VFGDFKDVLIPGKLKQFVFDLHSGKLHREF PGKLKQFVFDLHSGKLHREFHHGPDPTDTA K Q F G K L 0 0 0 1 0 1 0 1 1 0 1 1 0 2 0 1 0 0 0 1 0 0 10 0 1176.5928 Q9BS26 Q9BS26 346 355 ERP44 Endoplasmic reticulum resident protein 44 yes yes 2 0.00055596 119.53 By MS/MS 7 0 1 1 0 0 0 11355 2334 11924 28290 19967 19967 0 0 0 QFVLTLSELKR VARELKAFVEATFQRQFVLTLSELKRLFNL TFQRQFVLTLSELKRLFNLHLASLPPGHTL R Q F K R L 0 1 0 0 0 1 1 0 0 0 3 1 0 1 0 1 1 0 0 1 0 0 11 1 1332.7765 Q9NVU0 Q9NVU0 573 583 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.0043527 104.42 By MS/MS 5.5 0.5 1 1 2 0 0 0 11356 2661 11925 28291;28292 19968 19968 0 0 0 QFVPGDEPR LEELGNHKAFKKELRQFVPGDEPREKMDLV FKKELRQFVPGDEPREKMDLVTYFGKRPPG R Q F P R E 0 1 0 1 0 1 1 1 0 0 0 0 0 1 2 0 0 0 0 1 0 0 9 0 1043.5036 P09543 P09543 225 233 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 0.011002 102.62 By MS/MS 7 0.816 1 1 1 3 2563200 2563200 0 11357 516 11926 28293;28294;28295 19969 19969 1 45917 0 QFYINVER RILVKKEELTLEGIRQFYINVEREEWKLDT LTLEGIRQFYINVEREEWKLDTLCDLYETL R Q F E R E 0 1 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 8 0 1067.54 P60842;Q14240 P60842 248 255 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.00058885 166.68 By MS/MS By matching 5.11 2.69 2 2 2 2 1 3 2 2 1 1 17 1 369460000 369410000 50162 11358 1074 11927;11928 28296;28297;28298;28299;28300;28301;28302;28303;28304;28305;28306;28307;28308;28309;28310;28311;28312;28313 19970;19971;19972;19973;19974;19975;19976;19977;19978;19979;19980;19981;19982;19983 19981 8 6250000 153840 QFYINVEREEWK RILVKKEELTLEGIRQFYINVEREEWKLDT GIRQFYINVEREEWKLDTLCDLYETLTITQ R Q F W K L 0 1 1 0 0 1 3 0 0 1 0 1 0 1 0 0 0 1 1 1 0 0 12 1 1639.7995 P60842;Q14240 P60842 248 259 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2;3 9.4634E-56 318.59 By MS/MS 6.11 1.8 2 2 3 4 3 3 2 19 587450000 587450000 0 11359 1074 11929;11930 28314;28315;28316;28317;28318;28319;28320;28321;28322;28323;28324;28325;28326;28327;28328;28329;28330;28331;28332 19984;19985;19986;19987;19988;19989;19990;19991 19990 3 4872800 0 QGADTLAFMSLLEEK LRKEKYNADYDLSARQGADTLAFMSLLEEK QGADTLAFMSLLEEKLLPVLVHTFWIDTKN R Q G E K L 2 0 0 1 0 1 2 1 0 0 3 1 1 1 0 1 1 0 0 0 0 0 15 0 1651.8127 Q13505 Q13505 238 252 MTX1 Metaxin-1 yes yes 2 1.287E-05 139.19 By MS/MS 8 0 2 2 353550 353550 0 11360 1376 11931;11932 28333;28334 19992;19993 19992 1068 2 23324 0 QGAFLVNAAR HNHHLINDFTIKQMRQGAFLVNAARGGLVD IKQMRQGAFLVNAARGGLVDEKALAQALKE R Q G A R G 3 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1045.5669 P56545 P56545 263 272 CTBP2 C-terminal-binding protein 2 yes yes 2 0.00029388 153.04 By MS/MS 7 0.816 1 1 1 3 9978400 9978400 0 11361 1047 11933 28335;28336;28337 19994 19994 1 155260 0 QGAFLVNTAR HNHHLINDFTVKQMRQGAFLVNTARGGLVD VKQMRQGAFLVNTARGGLVDEKALAQALKE R Q G A R G 2 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1075.5774 Q13363 Q13363 257 266 CTBP1 C-terminal-binding protein 1 yes yes 2 0.00099686 142.98 By MS/MS 7.33 0.471 2 1 3 4397200 4397200 0 11362 1360 11934;11935 28338;28339;28340 19995;19996 19995 1 88035 0 QGAIVAVTGDGVNDSPALK TSPQQKLIIVEGCQRQGAIVAVTGDGVNDS VAVTGDGVNDSPALKKADIGVAMGIAGSDV R Q G L K K 3 0 1 2 0 1 0 3 0 1 1 1 0 0 1 1 1 0 0 3 0 0 19 0 1810.9425 P05023;P50993;P13637 P05023 708 726 ATP1A1;ATP1A2;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 3.876E-56 281.54 By MS/MS By MS/MS 2.93 1.34 3 3 3 4 2 14 1 28629000 28561000 68206 11363 463;575 11936;11937 28341;28342;28343;28344;28345;28346;28347;28348;28349;28350;28351;28352;28353;28354;28355 19997;19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010 20002 7 977860 142520 QGAIVAVTGDGVNDSPALKK TSPQQKLIIVEGCQRQGAIVAVTGDGVNDS AVTGDGVNDSPALKKADIGVAMGIAGSDVS R Q G K K A 3 0 1 2 0 1 0 3 0 1 1 2 0 0 1 1 1 0 0 3 0 0 20 1 1939.0375 P05023;P50993;P13637 P05023 708 727 ATP1A1;ATP1A2;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2;3 6.3588E-08 141.82 By MS/MS 3 1.26 2 1 3 3 1 10 5026100 5026100 0 11364 463;575 11938;11939 28356;28357;28358;28359;28360;28361;28362;28363;28364;28365 20011;20012;20013;20014;20015 20015 2 149640 0 QGANINEIR ELTIPNNLIGCIIGRQGANINEIRQMSGAQ GCIIGRQGANINEIRQMSGAQIKIANPVEG R Q G I R Q 1 1 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1013.5254 Q15365 Q15365 298 306 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.00054507 152.34 By MS/MS 7.5 0.5 2 2 4 18373000 18373000 0 11365 1490 11940;11941 28366;28367;28368;28369 20016;20017;20018 20017 2 597460 0 QGDNCDSIIRR PQPSNGHFSTKIEIRQGDNCDSIIRRLMKM IEIRQGDNCDSIIRRLMKMNRGIKDLSKVK R Q G R R L 0 2 1 2 1 1 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 11 1 1332.6204 Q9P2J5 Q9P2J5 1089 1099 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.020929 74.173 By MS/MS 3 0 1 1 0 0 0 11366 2738 11942 28370 20019 20019 0 0 0 QGDTGDWIGTFLGHK YFLISACKDGKPMLRQGDTGDWIGTFLGHK QGDTGDWIGTFLGHKGAVWGATLNKDATKA R Q G H K G 0 0 0 2 0 1 0 4 1 1 1 1 0 1 0 0 2 1 0 0 0 0 15 0 1630.774 Q9Y3F4 Q9Y3F4 45 59 STRAP Serine-threonine kinase receptor-associated protein yes yes 2;3 0.00025011 120.87 By MS/MS 7.33 0.471 2 1 3 282290 282290 0 11367 2937 11943;11944 28371;28372;28373 20020;20021;20022 20022 1 5044.6 0 QGEEVFQSLSK RAYSDQAIVNLLKMRQGEEVFQSLSKILDV LKMRQGEEVFQSLSKILDVASLEVLNEVNR R Q G S K I 0 0 0 0 0 2 2 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1250.6143 Q92616 Q92616 2624 2634 GCN1L1 Translational activator GCN1 yes yes 2 0.0012349 116.55 By MS/MS 2.4 1.02 1 2 1 1 5 1788600 1788600 0 11368 2068 11945;11946 28374;28375;28376;28377;28378 20023;20024 20024 1 88753 0 QGFGNLPICMAK ELLPEAQHKAEVYTKQGFGNLPICMAKTHL YTKQGFGNLPICMAKTHLSLSHNPEQKGVP K Q G A K T 1 0 1 0 1 1 0 2 0 1 1 1 1 1 1 0 0 0 0 0 0 0 12 0 1334.6475 P11586 P11586 855 866 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0019646 122.33 By MS/MS 4.4 0.49 3 2 5 3537100 3537100 0 11369 556 11947;11948;11949 28379;28380;28381;28382;28383 20025;20026;20027 20026 351 2 101970 0 QGFNVVVESGAGEASK KRVALSPAGVQNLVKQGFNVVVESGAGEAS GFNVVVESGAGEASKFSDDHYRVAGAQIQG K Q G S K F 2 0 1 0 0 1 2 3 0 0 0 1 0 1 0 2 0 0 0 3 0 0 16 0 1577.7686 Q13423 Q13423 85 100 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 2.3025E-10 187.74 By MS/MS 1 0 1 1 461750 461750 0 11370 1367 11950 28384 20028 20028 1 22560 0 QGGAPDAGQE DIVSGHKKKGDDQSRQGGAPDAGQE_____ DDQSRQGGAPDAGQE_______________ R Q G Q E - 2 0 0 1 0 2 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 10 0 928.38864 P49368 P49368 536 545 CCT3 T-complex protein 1 subunit gamma yes yes 2 6.3798E-07 187.5 By MS/MS By matching 6 0 2 1 1 6282800 6269100 13684 11371 916 11951 28385;28386 20029 20029 1 48887 41967 QGGGGGGGSVPGIER EILSNALKRGEIIAKQGGGGGGGSVPGIER QGGGGGGGSVPGIERMGPGIDRLGGAGMER K Q G E R M 0 1 0 0 0 1 1 8 0 1 0 0 0 0 1 1 0 0 0 1 0 0 15 0 1283.6218 P52272 P52272 389 403 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0036151 109.44 By MS/MS 5.5 0.5 1 1 2 9328000 9328000 0 11372 982 11952 28387;28388 20030 20030 1 342370 0 QGGITSDQAAVISK DFNQLEAFLTAQTKKQGGITSDQAAVISKF KQGGITSDQAAVISKFWKSHKTKIRESLMN K Q G S K F 2 0 0 1 0 2 0 2 0 2 0 1 0 0 0 2 1 0 0 1 0 0 14 0 1373.7151 Q8N668 Q8N668 83 96 COMMD1 COMM domain-containing protein 1 yes yes 2 1.5013E-05 164.22 By MS/MS 9 0 1 1 425670 425670 0 11373 1927 11953 28389 20031 20031 1 244300 0 QGGLGPMNIPLVSDPK DSHFCHLAWVNTPKKQGGLGPMNIPLVSDP GGLGPMNIPLVSDPKRTIAQDYGVLKADEG K Q G P K R 0 0 1 1 0 1 0 3 0 1 2 1 1 0 3 1 0 0 0 1 0 0 16 0 1621.8498 Q06830 Q06830 94 109 PRDX1 Peroxiredoxin-1 yes yes 2 4.0463E-06 146.67 By MS/MS 9 0 3 3 950650 950650 0 11374 1277 11954;11955;11956 28390;28391;28392 20032;20033;20034 20032 1035 2 545590 0 QGGLGPMNIPLVSDPKR DSHFCHLAWVNTPKKQGGLGPMNIPLVSDP GLGPMNIPLVSDPKRTIAQDYGVLKADEGI K Q G K R T 0 1 1 1 0 1 0 3 0 1 2 1 1 0 3 1 0 0 0 1 0 0 17 1 1777.9509 Q06830 Q06830 94 110 PRDX1 Peroxiredoxin-1 yes yes 2 0.012342 65.563 By MS/MS 9 0 1 1 0 0 0 11375 1277 11957 28393 20035 20035 1035 0 0 0 QGGPTYYIDTNALR DDGSTLMEIDGDKGKQGGPTYYIDTNALRV KQGGPTYYIDTNALRVPRENMEAISPLKNG K Q G L R V 1 1 1 1 0 1 0 2 0 1 1 0 0 0 1 0 2 0 2 0 0 0 14 0 1567.7631 O96019 O96019 63 76 ACTL6A Actin-like protein 6A yes yes 2 3.7988E-05 155.99 By MS/MS 7 0 1 1 1141900 1141900 0 11376 422 11958 28394 20036 20036 1 20407 0 QGHIVAISSIQGK VALTKALLPSMIKRRQGHIVAISSIQGKMS RRQGHIVAISSIQGKMSIPFRSAYAASKHA R Q G G K M 1 0 0 0 0 2 0 2 1 3 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1336.7463 Q6IAN0 Q6IAN0 186 198 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 3 0.0020451 110.15 By MS/MS 8 0 1 1 1182500 1182500 0 11377 1682 11959 28395 20037 20037 1 78010 0 QGIVPPGLTENELWR NEQLESARKIVHDYRQGIVPPGLTENELWR QGIVPPGLTENELWRAKYIYDSAFHPDTGE R Q G W R A 0 1 1 0 0 1 2 2 0 1 2 0 0 0 2 0 1 1 0 1 0 0 15 0 1707.8944 Q9H9B4 Q9H9B4 56 70 SFXN1 Sideroflexin-1 yes yes 2 0.005152 120.57 By MS/MS 7.5 0.5 1 1 2 9947200 9947200 0 11378 2533 11960 28396;28397 20038 20038 1 650380 0 QGLLPLTFADPADYNK ITKSFARIHETNLKKQGLLPLTFADPADYN GLLPLTFADPADYNKIHPVDKLTIQGLKDF K Q G N K I 2 0 1 2 0 1 0 1 0 0 3 1 0 1 2 0 1 0 1 0 0 0 16 0 1761.8938 Q99798 Q99798 702 717 ACO2 Aconitate hydratase, mitochondrial yes yes 2 0.038658 70.563 By MS/MS 5 0 1 1 66058 66058 0 11379 2292 11961 28398 20039 20039 1 2715.2 0 QGLQTTQAHLER YRKRAPYIAYLTRCRQGLQTTQAHLERLLQ RCRQGLQTTQAHLERLLQRVLRDKEVANRY R Q G E R L 1 1 0 0 0 3 1 1 1 0 2 0 0 0 0 0 2 0 0 0 0 0 12 0 1380.711 Q14C86 Q14C86 1222 1233 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.018224 76.679 By MS/MS By matching 10 0 3 2 1 0 0 0 11380 1455 11962 28399;28400;28401 20040 20040 0 0 0 QGNGPVLVCAPSNIAVDQLTEK GKTVTSATIVYHLARQGNGPVLVCAPSNIA VCAPSNIAVDQLTEKIHQTGLKVVRLCAKS R Q G E K I 2 0 2 1 1 2 1 2 0 1 2 1 0 0 2 1 1 0 0 3 0 0 22 0 2309.1685 Q92900 Q92900 523 544 UPF1 Regulator of nonsense transcripts 1 yes yes 2 3.9737E-05 107.13 By MS/MS 3 0 1 1 506860 506860 0 11381 2088 11963 28402 20041 20041 1 13232 0 QGNLFDFLR QWDRITRLEKGKIYRQGNLFDFLRLTEWRG KGKIYRQGNLFDFLRLTEWRGPRVLYFGDH R Q G L R L 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1108.5665 Q9H857 Q9H857 336 344 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 3.9775E-06 181.41 By MS/MS 6 1.29 1 1 2 1 1 6 8729200 8729200 0 11382 2522 11964;11965 28403;28404;28405;28406;28407;28408 20042;20043 20042 1 74304 0 QGNLSSQVPLK QALTEIQEFISFISKQGNLSSQVPLKRLLN FISKQGNLSSQVPLKRLLNTWTNRYPDAKM K Q G L K R 0 0 1 0 0 2 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 11 0 1169.6404 P78527 P78527 3148 3158 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.6225E-05 172.98 By MS/MS 1.5 0.5 1 1 2 1236000 1236000 0 11383 1197 11966 28409;28410 20044;20045 20044 2 60802 0 QGNLSSQVPLKR QALTEIQEFISFISKQGNLSSQVPLKRLLN ISKQGNLSSQVPLKRLLNTWTNRYPDAKMD K Q G K R L 0 1 1 0 0 2 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1325.7415 P78527 P78527 3148 3159 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.036737 71.555 By MS/MS 2 0.816 1 1 1 3 1878300 1878300 0 11384 1197 11967 28411;28412;28413 20046;20047 20046 2 76152 0 QGPAETGGQGQPQGPGLR LGGQALHLRSWLLSRQGPAETGGQGQPQGP AETGGQGQPQGPGLRTRLLITGLFGAGLGG R Q G L R T 1 1 0 0 0 4 1 6 0 0 1 0 0 0 3 0 1 0 0 0 0 0 18 0 1733.8445 O43819 O43819 41 58 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2;3 1.1015E-25 276.12 By MS/MS 8 0 3 3 5040300 5040300 0 11385 226 11968;11969 28414;28415;28416 20048;20049;20050 20048 2 332510 0 QGQDAIPPPDPGEQIFNLPK DANYDGKEYDPVEARQGQDAIPPPDPGEQI IPPPDPGEQIFNLPKKSHHANSPTAGAAKS R Q G P K K 1 0 1 2 0 3 1 2 0 2 1 1 0 1 5 0 0 0 0 0 0 0 20 0 2160.0851 Q15555 Q15555 174 193 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.0016488 102.73 By MS/MS 7.33 0.471 2 1 3 1973200 1973200 0 11386 1508 11970;11971 28417;28418;28419 20051;20052 20051 1 44634 0 QGQELSAAR REEREALERERQRRRQGQELSAARQRLQED ERQRRRQGQELSAARQRLQEDEMRRAAEER R Q G A R Q 2 1 0 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 958.48321 Q04323 Q04323 127 135 UBXN1 UBX domain-containing protein 1 yes yes 2 0.011638 101.46 By MS/MS 7 0 1 1 3105300 3105300 0 11387 1262 11972 28420 20053 20053 1 55493 0 QGQETAVAPSLVAPALNKPK DANYDGKDYDPVAARQGQETAVAPSLVAPA AVAPSLVAPALNKPKKPLTSSSAAPQRPIS R Q G P K K 4 0 1 0 0 2 1 1 0 0 2 2 0 0 3 1 1 0 0 2 0 0 20 1 2018.116 Q15691 Q15691 131 150 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2 1.1612E-11 173.25 By MS/MS 8 0 1 1 0 0 0 11388 1513 11973 28421 20054 20054 0 0 0 QGQGQLVTCSGAFK NLGPIVDMCVVDLERQGQGQLVTCSGAFKE RQGQGQLVTCSGAFKEGSLRIIRNGIGIHE R Q G F K E 1 0 0 0 1 3 0 3 0 0 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1479.714 Q16531 Q16531 370 383 DDB1 DNA damage-binding protein 1 yes yes 2 1.1316E-31 238.01 By MS/MS 2.5 1.5 1 1 2 0 0 0 11389 1537 11974 28422;28423 20055;20056 20056 2 0 0 QGQITPTELCQK ______________________________ ALKQGQITPTELCQKCLSLIKKTKFLNAYI K Q G Q K C 0 0 0 0 1 3 1 1 0 1 1 1 0 0 1 0 2 0 0 0 0 0 12 0 1401.6922 Q9H0R6 Q9H0R6 15 26 QRSL1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 2 0.0004881 139.15 By MS/MS 6 0 1 1 3567800 3567800 0 11390 2456 11975 28424 20057 20057 1 27822 0 QGQYSPMAIEEQVAVIYAGVR QQLLSRGVRLTELLKQGQYSPMAIEEQVAV MAIEEQVAVIYAGVRGYLDKLEPSKITKFE K Q G V R G 3 1 0 0 0 3 2 2 0 2 0 0 1 0 1 1 0 0 2 3 0 0 21 0 2308.1522 P25705 P25705 473 493 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 1.3968E-25 212.35 By MS/MS 6 0 2 2 1750700 1750700 0 11391 687 11976 28425;28426 20058;20059 20058 462 2 13652 0 QGRPVVICDKEDTETIK TYAKCQNALQQVVARQGRPVVICDKEDTET RPVVICDKEDTETIKNTKRTIKVPHSVDCL R Q G I K N 0 1 0 2 1 1 2 1 0 2 0 2 0 0 1 0 2 0 0 2 0 0 17 2 1987.0044 Q06210 Q06210 631 647 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 3;4 0.0050415 91.932 By MS/MS 5 0 2 2 2860500 2860500 0 11392 1274 11977 28427;28428 20060;20061 20061 2 117580 0 QGSAQSQQQIR EHLEKELSEKSGQLRQGSAQSQQQIRGEID GQLRQGSAQSQQQIRGEIDSLRQEKDSLLK R Q G I R G 1 1 0 0 0 5 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 0 11 0 1229.6113 Q2M1P5 Q2M1P5 994 1004 KIF7 Kinesin-like protein KIF7 yes yes 2 3.751E-07 188.99 By MS/MS 3 0 1 1 353960 353960 0 11393 1558 11978 28429 20062 20062 1 9240.2 0 QGSATVGLK QGRIHQIEYAMEAVKQGSATVGLKSKTHAV AMEAVKQGSATVGLKSKTHAVLVALKRAQS K Q G L K S 1 0 0 0 0 1 0 2 0 0 1 1 0 0 0 1 1 0 0 1 0 0 9 0 859.47633 P25786 P25786 31 39 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.030852 90.601 By MS/MS 8 0 1 1 3166700 3166700 0 11394 688 11979 28430 20063 20063 1 208910 0 QGSGSGQSPGHGQR GQHGSGSSQSSGYGRQGSGSGQSPGHGQRG RQGSGSGQSPGHGQRGSGSRQSPSYGRHGS R Q G Q R G 0 1 0 0 0 3 0 5 1 0 0 0 0 0 1 3 0 0 0 0 0 0 14 0 1338.6025 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1118 1131 HRNR Hornerin yes no 2 4.0122E-08 177.04 By MS/MS By MS/MS 4.75 2.7 2 3 2 3 4 2 1 1 2 9 11 615290 241970 373320 + 11395 64 11980;11981 28431;28432;28433;28434;28435;28436;28437;28438;28439;28440;28441;28442;28443;28444;28445;28446;28447;28448;28449;28450 20064;20065;20066;20067;20068;20069;20070;20071;20072;20073;20074;20075;20076;20077 20065 1 7217 411420 QGSGSGQSPSR GQHGSGSSQSSRYGQQGSGSGQSPSRGRHG RYGQQGSGSGQSPSRGRHGSDFGHSSSYGQ Q Q G S R G 0 1 0 0 0 2 0 3 0 0 0 0 0 0 1 4 0 0 0 0 0 0 11 0 1046.4741 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 652 662 HRNR Hornerin yes no 2 0.003551 93.442 By MS/MS 2.5 0.5 1 1 2 0 0 0 + 11396 64 11982 28451;28452 20078;20079 20079 0 0 0 QGSPVAAGAPAK ENGRRGGFGSRGQPRQGSPVAAGAPAKQQQ QPRQGSPVAAGAPAKQQQVDIPLRLLVPTQ R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.00092039 134.23 By MS/MS 5 0 1 1 473680 473680 0 11397 2711 11983 28453 20080 20080 1 19470 0 QGTFHSQQALEYGTK VDKNTKIICQGFTGKQGTFHSQQALEYGTK QGTFHSQQALEYGTKLVGGTTPGKGGQTHL K Q G T K L 1 0 0 0 0 3 1 2 1 0 1 1 0 1 0 1 2 0 1 0 0 0 15 0 1693.806 P53597 P53597 67 81 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 2 5.233E-05 135.81 By MS/MS 8 0 2 2 762410 762410 0 11398 1002 11984;11985 28454;28455 20081;20082 20082 1 50296 0 QGTIFLAGPPLVK AYVPAMADENIIVRKQGTIFLAGPPLVKAA RKQGTIFLAGPPLVKAATGEEVSAEDLGGA K Q G V K A 1 0 0 0 0 1 0 2 0 1 2 1 0 1 2 0 1 0 0 1 0 0 13 0 1339.7864 Q9HCC0 Q9HCC0 236 248 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.00036851 139.15 By MS/MS 6.33 0.471 2 1 3 2608700 2608700 0 11399 2559 11986;11987 28456;28457;28458 20083;20084 20083 1 21278 0 QGTPLIAFSLLPHEQK LHVSEVPVSVVECFRQGTPLIAFSLLPHEQ GTPLIAFSLLPHEQKMSVLNMVVRRDPGNT R Q G Q K M 1 0 0 0 0 2 1 1 1 1 3 1 0 1 2 1 1 0 0 0 0 0 16 0 1777.9727 Q2NL82 Q2NL82 575 590 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 0.0010556 113.76 By MS/MS 4 0 1 1 0 0 0 11400 1560 11988 28459 20085;20086 20085 0 0 0 QGTYGGYFR LGSLVENNERVFDHKQGTYGGYFRDQKDGY RVFDHKQGTYGGYFRDQKDGYRKNEGYMRR K Q G F R D 0 1 0 0 0 1 0 3 0 0 0 0 0 1 0 0 1 0 2 0 0 0 9 0 1047.4774 Q99613;B5ME19 Q99613 878 886 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0089921 107.01 By MS/MS 3.67 0.471 1 2 3 7524700 7524700 0 11401 2275 11989;11990 28460;28461;28462 20087;20088 20087 1 205160 0 QGVCIGLSEIMK PILEEGLRSQKSDERQGVCIGLSEIMKSTS DERQGVCIGLSEIMKSTSRDAVLYFSESLV R Q G M K S 0 0 0 0 1 1 1 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1333.6734 Q92616 Q92616 1981 1992 GCN1L1 Translational activator GCN1 yes yes 2 0.00017418 150.09 By MS/MS 2 0.707 1 2 1 4 1473100 1473100 0 11402 2068 11991;11992 28463;28464;28465;28466 20089;20090 20089 1353 1 73130 0 QGVDADINGLR LDDFRIKFEMEQNLRQGVDADINGLRQVLD QNLRQGVDADINGLRQVLDNLTMEKSDLEM R Q G L R Q 1 1 1 2 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1156.5836 P35527;CON__P35527 P35527 251 261 KRT9 Keratin, type I cytoskeletal 9 yes no 2 7.6252E-07 182.16 By MS/MS By MS/MS 6.03 2.76 2 2 4 3 4 3 4 3 5 4 12 22 54067000 20789000 33278000 + 11403 791 11993;11994 28467;28468;28469;28470;28471;28472;28473;28474;28475;28476;28477;28478;28479;28480;28481;28482;28483;28484;28485;28486;28487;28488;28489;28490;28491;28492;28493;28494;28495;28496;28497;28498;28499;28500 20091;20092;20093;20094;20095;20096;20097;20098;20099;20100;20101;20102;20103;20104;20105;20106;20107;20108;20109;20110;20111;20112;20113;20114;20115;20116 20094 14 7760300 70008000 QGVFSSLNHIVEK RIIPNFYPPLEGHVRQGVFSSLNHIVEKRV VRQGVFSSLNHIVEKRVLAHLAPLFDNPKL R Q G E K R 0 0 1 0 0 1 1 1 1 1 1 1 0 1 0 2 0 0 0 2 0 0 13 0 1456.7674 Q68E01 Q68E01 455 467 INTS3 Integrator complex subunit 3 yes yes 2 0.0040476 117.09 By MS/MS 4 0 1 1 0 0 0 11404 1674 11995 28501 20117 20117 0 0 0 QGVLEHILS SQHFLPRWKCEQLIRQGVLEHILS______ CEQLIRQGVLEHILS_______________ R Q G L S - 0 0 0 0 0 1 1 1 1 1 2 0 0 0 0 1 0 0 0 1 0 0 9 0 994.54475 Q14691 Q14691 188 196 GINS1 DNA replication complex GINS protein PSF1 yes yes 2 0.01017 104.44 By MS/MS 9 0 1 1 308350 308350 0 11405 1441 11996 28502 20118 20118 1 176960 0 QGVNNAEKFDYVMQFLNK PMVNAGAIVVTSLIKQGVNNAEKFDYVMQF NNAEKFDYVMQFLNKMAGNEYVGFSNATFQ K Q G N K M 1 0 3 1 0 2 1 1 0 0 1 2 1 2 0 0 0 0 1 2 0 0 18 1 2144.0361 O94925 O94925 347 364 GLS Glutaminase kidney isoform, mitochondrial yes yes 3 0.024806 61.226 By MS/MS 6 0 1 1 1457500 1457500 0 11406 359 11997 28503 20119 20119 191 1 11366 0 QGVPAFTVLQPEGPLAVLR DTVEKIAWQKGGIFKQGVPAFTVLQPEGPL AFTVLQPEGPLAVLRDRAQQISCPLYLCPM K Q G L R D 2 1 0 0 0 2 1 2 0 0 3 0 0 1 3 0 1 0 0 3 0 0 19 0 1991.1204 Q05932 Q05932 249 267 FPGS Folylpolyglutamate synthase, mitochondrial yes yes 2;3 0.0044275 81.128 By MS/MS 6 0 3 3 1394500 1394500 0 11407 1271 11998;11999 28504;28505;28506 20120;20121;20122 20121 2 10874 0 QGVQVQVSTSNISSLEGAR IRTGYQAKQVRRWRRQGVQVQVSTSNISSL VQVSTSNISSLEGARGLIAEAAQLGPVGGV R Q G A R G 1 1 1 0 0 3 1 2 0 1 1 0 0 0 0 4 1 0 0 3 0 0 19 0 1959.0021 P49327 P49327 1935 1953 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.3244E-83 314.06 By MS/MS 2 0 2 2 390820 390820 0 11408 915 12000;12001 28507;28508 20123;20124 20123 1 19426 0 QGYLPPEFTAGLSSELR NMELPHGGEGWQQLRQGYLPPEFTAGLSSE YLPPEFTAGLSSELRSVLVMMLEPDPKLRA R Q G L R S 1 1 0 0 0 1 2 2 0 0 3 0 0 1 2 2 1 0 1 0 0 0 17 0 1863.9367 Q99640 Q99640 317 333 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase yes yes 2 0.0057316 102.73 By MS/MS 6 0 1 1 1056100 1056100 0 11409 2280 12002 28509 20125 20125 1 8235.7 0 QGYVLSSIEGR SLKYQTRCIRAFPNKQGYVLSSIEGRVAVE FPNKQGYVLSSIEGRVAVEYLDPSPEVQKK K Q G G R V 0 1 0 0 0 1 1 2 0 1 1 0 0 0 0 2 0 0 1 1 0 0 11 0 1207.6197 O43684 O43684 192 202 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0039524 112.13 By MS/MS 8 0.816 1 1 1 3 3572400 3572400 0 11410 216 12003 28510;28511;28512 20126 20126 1 211420 0 QHCAYTIAK LNISPPLNLNPVWFKQHCAYTIAKYGMSMY NPVWFKQHCAYTIAKYGMSMYVLGMAEEFK K Q H A K Y 2 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 9 0 1090.523 Q6YN16 Q6YN16 164 172 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 3 0.0077067 100.02 By MS/MS 7 0 1 1 502530 502530 0 11411 1738 12004 28513 20127 20127 1 8980.3 0 QHEADADLINAGK LQSENGVLGLGPYPRQHEADADLINAGKET PRQHEADADLINAGKETVTILPGASFFSSD R Q H G K E 3 0 1 2 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 13 0 1380.6634 P55809 P55809 356 368 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2;3 0.024461 80.979 By MS/MS 6 0 2 2 5169400 5169400 0 11412 1038 12005 28514;28515 20128;20129 20128 2 40311 0 QHFPATPLLDYALEVEK NNPDMRVQILKDYVRQHFPATPLLDYALEV FPATPLLDYALEVEKITTSKKPNLILNVDG R Q H E K I 2 0 0 1 0 1 2 0 1 0 3 1 0 1 2 0 1 0 1 1 0 0 17 0 1970.0149 P53396 P53396 996 1012 ACLY ATP-citrate synthase yes yes 2 5.081E-14 182.02 By MS/MS 5 1 1 1 2 0 0 0 11413 1001 12006 28516;28517 20130;20131 20131 0 0 0 QHFYPSR STPQATQMNTPSQPRQHFYPSRAQPPSSAA MNTPSQPRQHFYPSRAQPPSSAASRVQSAA R Q H S R A 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 0 7 0 933.4457 Q04637 Q04637 49 55 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.053933 81.191 By MS/MS 2 0 1 1 190330 190330 0 11414 1264 12007 28518 20132 20132 1 9460.5 0 QHLEITGGQVR TPGYVVTPHTMNLLKQHLEITGGQVRTRFP NLLKQHLEITGGQVRTRFPPEPNGILHIGH K Q H V R T 0 1 0 0 0 2 1 2 1 1 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1236.6575 P47897 P47897 255 265 QARS Glutamine--tRNA ligase yes yes 2 0.00058923 128.51 By MS/MS 5 0 2 2 936640 936640 0 11415 896 12008;12009 28519;28520 20133;20134 20134 1 38500 0 QHLLGTSPER VSLRDGFVCALLRFRQHLLGTSPERVVQHL LLRFRQHLLGTSPERVVQHLCQRRVEPPEL R Q H E R V 0 1 0 0 0 1 1 1 1 0 2 0 0 0 1 1 1 0 0 0 0 0 10 0 1136.5938 Q8WUY1 Q8WUY1 153 162 THEM6 Protein THEM6 yes yes 2 0.00055785 118.03 By MS/MS 9 0 1 1 0 0 0 11416 2020 12010 28521 20135 20135 0 0 0 QHLSSVVFIK VSRWFCHIQHYPGIRQHLSSVVFIKNRLYT YPGIRQHLSSVVFIKNRLYTNSH_______ R Q H I K N 0 0 0 0 0 1 0 0 1 1 1 1 0 1 0 2 0 0 0 2 0 0 10 0 1156.6604 O43324 O43324 157 166 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.0066088 110.53 By MS/MS 9.5 0.5 1 1 2 0 0 0 11417 194 12011 28522;28523 20136 20136 0 0 0 QHLVEVR PAVIEAQNAVKSIKKQHLVEVRSMANPPAA NAVKSIKKQHLVEVRSMANPPAAVKLALES K Q H V R S 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 7 0 879.49265 Q14204 Q14204 3302 3308 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.044065 85.212 By MS/MS 1 0 2 2 0 0 0 11418 1421 12012 28524;28525 20137;20138 20137 0 0 0 QHTFVETESVR EGLLAAFPKLMNTGKQHTFVETESVRYVYQ NTGKQHTFVETESVRYVYQPMEKLYMVLIT K Q H V R Y 0 1 0 0 0 1 2 0 1 0 0 0 0 1 0 1 2 0 0 2 0 0 11 0 1331.647 P48444 P48444 45 55 ARCN1 Coatomer subunit delta yes yes 2 4.1003E-06 175.49 By MS/MS 6 0 2 2 4880300 4880300 0 11419 903 12013;12014 28526;28527 20139;20140 20140 1 38057 0 QHTTFSAESSR LTRPGSFLLTSTSGRQHTTFSAESSRSLLI TSGRQHTTFSAESSRSLLICLLWVLKNADE R Q H S R S 1 1 0 0 0 1 1 0 1 0 0 0 0 1 0 3 2 0 0 0 0 0 11 0 1249.5687 Q96N67 Q96N67 1316 1326 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2;3 4.6482E-11 202.31 By MS/MS 2.8 0.748 2 2 1 5 730460 730460 0 11420 2230 12015;12016 28528;28529;28530;28531;28532 20141;20142 20142 1 33877 0 QHVPEQHPK EEPDPKMVELAKYAKQHVPEQHPKDKPSFV LAKYAKQHVPEQHPKDKPSFVRARVKKLLA K Q H P K D 0 0 0 0 0 2 1 0 2 0 0 1 0 0 2 0 0 0 0 1 0 0 9 0 1098.557 Q9H3U1 Q9H3U1 618 626 UNC45A Protein unc-45 homolog A yes yes 2;3 0.0022977 105.14 By MS/MS 4 0 3 3 756060 756060 0 11421 2493 12017;12018 28533;28534;28535 20143;20144;20145 20144 2 20639 0 QHVTEAFQFHF VMGISSLLPSLEAWKQHVTEAFQFHF____ EAWKQHVTEAFQFHF_______________ K Q H H F - 1 0 0 0 0 2 1 0 2 0 0 0 0 3 0 0 1 0 0 1 0 0 11 0 1389.6466 O43175 O43175 523 533 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 0.00086639 125.68 By MS/MS 6 0 1 1 1341300 1341300 0 11422 185 12019 28536 20146 20146 1 10459 0 QHYNCEHSK PSSVSFADDFVRSSKQHYNCEHSKINFRDK FVRSSKQHYNCEHSKINFRDKRSALQSINE K Q H S K I 0 0 1 0 1 1 1 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1201.4935 P50454 P50454 152 160 SERPINH1 Serpin H1 yes yes 2 0.0020363 129.42 By MS/MS 6.5 0.5 1 1 2 1539800 1539800 0 11423 947 12020 28537;28538 20147;20148 20148 2 19555 0 QIAASSQDSVGR SLSTSKLNSLAIGLRQIAASSQDSVGRVLR GLRQIAASSQDSVGRVLRRTRIAKNLELEQ R Q I G R V 2 1 0 1 0 2 0 1 0 1 0 0 0 0 0 3 0 0 0 1 0 0 12 0 1217.6 P54886 P54886 442 453 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 1.7898E-08 191.33 By MS/MS By MS/MS 4.54 1.6 1 1 4 3 3 1 9 4 37704000 37066000 637450 11424 1019 12021;12022 28539;28540;28541;28542;28543;28544;28545;28546;28547;28548;28549;28550;28551 20149;20150;20151;20152;20153;20154;20155;20156;20157 20155 7 1493300 1855700 QIAEEDFYEK DDESGAGELTREELRQIAEEDFYEKLAASI REELRQIAEEDFYEKLAASIAPEIYGHEDV R Q I E K L 1 0 0 1 0 1 3 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 10 0 1270.5717 P33993 P33993 326 335 MCM7 DNA replication licensing factor MCM7 yes yes 2 1.2447E-06 179.81 By MS/MS By matching 5.33 0.471 2 1 2 1 12320000 12294000 26283 11425 775 12023 28552;28553;28554 20158 20158 1 398270 77771 QIALAVLSTELAVR PDLLQQAKCLGFSDKQIALAVLSTELAVRK KQIALAVLSTELAVRKLRQELGICPAVKQI K Q I V R K 3 1 0 0 0 1 1 0 0 1 3 0 0 0 0 1 1 0 0 2 0 0 14 0 1482.877 P27708 P27708 875 888 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0092983 81.017 By MS/MS 2 0 1 1 0 0 0 11426 709 12024 28555 20159 20159 0 0 0 QIAQLQDFVR ELTYIIKQDINSLNKQIAQLQDFVRAKGSQ NSLNKQIAQLQDFVRAKGSQSGRHLQTHSN K Q I V R A 1 1 0 1 0 3 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 10 0 1216.6564 Q13190 Q13190 149 158 STX5 Syntaxin-5 yes yes 2 7.7121E-07 185.81 By MS/MS 7.5 0.5 2 2 4 3804100 3804100 0 11427 1346 12025;12026 28556;28557;28558;28559 20160;20161;20162;20163;20164 20161 3 127600 0 QICAFSDVLPVLSMK FISEATVEKLQPENRQICAFSDVLPVLSMK QICAFSDVLPVLSMKHTKDRVGQNLPRCGI R Q I M K H 1 0 0 1 1 1 0 0 0 1 2 1 1 1 1 2 0 0 0 2 0 0 15 0 1706.8735 Q9Y312 Q9Y312 154 168 AAR2 Protein AAR2 homolog yes yes 2 0.039293 70.54 By MS/MS 7 0 1 1 0 0 0 11428 2910 12027 28560 20165 20165 1677 0 0 0 QICVVMLESPPK VTISGTPDAIIQCVKQICVVMLESPPKGAT CVKQICVVMLESPPKGATIPYRPKPASTPV K Q I P K G 0 0 0 0 1 1 1 0 0 1 1 1 1 0 2 1 0 0 0 2 0 0 12 0 1399.7203 P57721 P57721 193 204 PCBP3 Poly(rC)-binding protein 3 yes yes 2 0.0021137 120.63 By MS/MS 7.5 0.5 1 1 2 534790 534790 0 11429 1055 12028 28561;28562 20166 20166 1 14547 0 QIDAPGDPFPLNPR NRLLHIVGYGDFQMKQIDAPGDPFPLNPRG KQIDAPGDPFPLNPRGIKPQKDPDMAMEIC K Q I P R G 1 1 1 2 0 1 0 1 0 1 1 0 0 1 4 0 0 0 0 0 0 0 14 0 1535.7732 Q2NL82 Q2NL82 301 314 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 2 1.4167E-05 170.4 By MS/MS 3.5 0.5 1 1 2 1047500 1047500 0 11430 1560 12029 28563;28564 20167 20167 1 28511 0 QIDLVDNYFVK QVGVIRCPVCRQECRQIDLVDNYFVKDTSE QECRQIDLVDNYFVKDTSEAPSSSDEKSEQ R Q I V K D 0 0 1 2 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 2 0 0 11 0 1352.6976 Q9UPN9 Q9UPN9 190 200 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.0010124 150.35 By MS/MS 3 0 2 2 0 0 0 11431 2852 12030;12031 28565;28566 20168;20169 20169 1 0 0 QIDQFLVVAR MEMKVWDPDNPLTDRQIDQFLVVARAVGTF PLTDRQIDQFLVVARAVGTFARALDCSSSI R Q I A R A 1 1 0 1 0 2 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 10 0 1187.6663 Q13330;Q9BTC8;O94776 O94776 189 198 MTA1;MTA3;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3;Metastasis-associated protein MTA2 no no 2 1.1775E-06 209.73 By MS/MS 5.33 0.471 2 1 3 4501200 4501200 0 11432 349;1357 12032;12033 28567;28568;28569 20170;20171 20170 1 139480 0 QIEEFNIGKR PTSKRETYTEDFIKKQIEEFNIGKRHLANM DFIKKQIEEFNIGKRHLANMMGEDPETFTQ K Q I K R H 0 1 1 0 0 1 2 1 0 2 0 1 0 1 0 0 0 0 0 0 0 0 10 1 1232.6513 P82933 P82933 77 86 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.00059413 159.58 By MS/MS By matching 7 0 4 3 1 11884000 11884000 0 11433 1211 12034;12035 28570;28571;28572;28573 20172;20173;20174;20175 20172 1 212370 0 QIFIGPPDIK DILDPALLRPGRFDRQIFIGPPDIKGRASI GRFDRQIFIGPPDIKGRASIFKVHLRPLKL R Q I I K G 0 0 0 1 0 1 0 1 0 3 0 1 0 1 2 0 0 0 0 0 0 0 10 0 1126.6386 Q9Y4W6 Q9Y4W6 472 481 AFG3L2 AFG3-like protein 2 yes yes 2 0.018874 93.143 By MS/MS 5 0 1 1 1313100 1313100 0 11434 2960 12036 28574 20176 20176 1 53973 0 QIFLGGVDK FPTQALNFAFKDKYKQIFLGGVDKRTQFWL FKDKYKQIFLGGVDKRTQFWLYFAGNLASG K Q I D K R 0 0 0 1 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 975.53893 P05141;P12236 P05141 97 105 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 1;2 1.8728E-05 175.91 By MS/MS 4.29 2.49 2 2 2 2 3 2 1 14 127840000 127840000 0 11435 469;563 12037;12038 28575;28576;28577;28578;28579;28580;28581;28582;28583;28584;28585;28586;28587;28588 20177;20178;20179;20180;20181;20182;20183;20184 20179 3 9552300 0 QIFLGGVDKR FPTQALNFAFKDKYKQIFLGGVDKRTQFWL KDKYKQIFLGGVDKRTQFWLYFAGNLASGG K Q I K R T 0 1 0 1 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 10 1 1131.64 P05141 P05141 97 106 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.0018345 169.44 By MS/MS By MS/MS 5.2 2.89 4 4 4 4 4 2 3 4 3 3 34 1 246610000 246610000 0 11436 469 12039;12040 28589;28590;28591;28592;28593;28594;28595;28596;28597;28598;28599;28600;28601;28602;28603;28604;28605;28606;28607;28608;28609;28610;28611;28612;28613;28614;28615;28616;28617;28618;28619;28620;28621;28622;28623 20185;20186;20187;20188;20189;20190;20191;20192;20193;20194;20195;20196;20197;20198;20199;20200;20201;20202;20203;20204;20205;20206;20207;20208;20209 20199 12 19395000 0 QIFSVILRPSDDNPVR PPPTILKPVTLWTGKQIFSVILRPSDDNPV IFSVILRPSDDNPVRANLRTKGKQYCGKGE K Q I V R A 0 2 1 2 0 1 0 0 0 2 1 0 0 1 2 2 0 0 0 2 0 0 16 1 1854.9952 O14802 O14802 599 614 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.041891 113.61 By MS/MS 3.5 0.5 1 1 2 0 0 0 11437 128 12041 28624;28625 20210 20210 0 0 0 QIFTNTVAR EALSNALKDLQYVKKQIFTNTVARFAADLA LQYVKKQIFTNTVARFAADLAEELVFEGIM K Q I A R F 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 9 0 1048.5665 Q9UKA4 Q9UKA4 637 645 AKAP11 A-kinase anchor protein 11 yes yes 3 0.05485 57.59 By MS/MS 1 0 1 1 0 0 0 11438 2809 12042 28626 20211 20211 0 0 0 QIGENLIVPGGVK QSFYADIYMEDGLIKQIGENLIVPGGVKTI IKQIGENLIVPGGVKTIEAHSRMVIPGGID K Q I V K T 0 0 1 0 0 1 1 3 0 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1322.7558 Q14194;Q16555 Q16555 44 56 CRMP1;DPYSL2 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 2 no no 2 0.031567 78.513 By MS/MS 6 0.816 1 1 1 3 2507700 2507700 0 11439 1418;1540 12043 28627;28628;28629 20212 20212 1 59416 0 QIGNVAALPGIVHR ACRGGGVGGFLPAMKQIGNVAALPGIVHRS KQIGNVAALPGIVHRSIGLPDVHSGYGFAI K Q I H R S 2 1 1 0 0 1 0 2 1 2 1 0 0 0 1 0 0 0 0 2 0 0 14 0 1443.831 Q9Y3I0 Q9Y3I0 68 81 RTCB tRNA-splicing ligase RtcB homolog yes yes 2;3 0.0015499 109.79 By MS/MS 7.33 1.89 2 1 3 4413000 4413000 0 11440 2938 12044;12045 28630;28631;28632 20213;20214;20215;20216 20216 1 34413 0 QIGVEHVVVYVNK DGPMPQTREHLLLARQIGVEHVVVYVNKAD ARQIGVEHVVVYVNKADAVQDSEMVELVEL R Q I N K A 0 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 1 5 0 0 13 0 1482.8195 P49411 P49411 170 182 TUFM Elongation factor Tu, mitochondrial yes yes 2 5.8302E-05 189.58 By MS/MS By MS/MS 7.43 0.904 1 3 2 1 6 1 10024000 10024000 0 11441 918 12046;12047 28633;28634;28635;28636;28637;28638;28639 20217;20218;20219;20220 20220 1 308190 0 QIHKFEELNR ADTKVARRYGDFFIRQIHKFEELNRTLKKM DFFIRQIHKFEELNRTLKKMGQRP______ R Q I N R T 0 1 1 0 0 1 2 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 10 1 1312.6888 Q9Y262 Q9Y262 546 555 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 0.00016272 136.02 By MS/MS 4.67 1.7 1 3 2 6 4341500 4341500 0 11442 2868 12048;12049 28640;28641;28642;28643;28644;28645 20221;20222;20223;20224;20225 20225 3 46071 0 QIIDDFITR INRPADVIQARGMKKQIIDDFITRNKYLLA ARGMKKQIIDDFITRNKYLLAARLTSQKLF K Q I T R N 0 1 0 2 0 1 0 0 0 3 0 0 0 1 0 0 1 0 0 0 0 0 9 0 1119.5924 Q9Y2G8 Q9Y2G8 348 356 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 2 0.017138 85.29 By MS/MS 5 0 1 1 0 0 0 11443 2885 12050 28646 20226 20226 0 0 0 QIILEKEETEELKR LLPSDTKRSQIYGSRQIILEKEETEELKRF RQIILEKEETEELKRFDDPGLMLMGFKPLV R Q I K R F 0 1 0 0 0 1 5 0 0 2 2 2 0 0 0 0 1 0 0 0 0 0 14 2 1756.9571 P12956 P12956 326 339 XRCC6 X-ray repair cross-complementing protein 6 yes yes 3 0.014815 81.904 By MS/MS 5 0 1 1 0 0 0 11444 569 12051 28647 20227 20227 0 0 0 QIIVDPLSFSEER GGGGELAYALNNFDKQIIVDPLSFSEERFR DKQIIVDPLSFSEERFRPSLEERLESIISG K Q I E R F 0 1 0 1 0 1 2 0 0 2 1 0 0 1 1 2 0 0 0 1 0 0 13 0 1531.7882 P35221 P35221 288 300 CTNNA1 Catenin alpha-1 yes yes 2 0.0065526 122.55 By MS/MS 4 0 1 1 589240 589240 0 11445 780 12052 28648 20228 20228 1 16086 0 QILHGDPLPLTR QCLGVQLLELGKKKKQILHGDPLPLTRKSY KKKQILHGDPLPLTRKSYLAWIGFSAEGTP K Q I T R K 0 1 0 1 0 1 0 1 1 1 3 0 0 0 2 0 1 0 0 0 0 0 12 0 1358.767 O75717 O75717 612 623 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.019432 75.819 By MS/MS 3.5 0.5 1 1 2 0 0 0 11446 325 12053 28649;28650 20229 20229 0 0 0 QILLYSATFPLSVQK VQIMEDIILTLPKNRQILLYSATFPLSVQK QILLYSATFPLSVQKFMNSHLQKPYEINLM R Q I Q K F 1 0 0 0 0 2 0 0 0 1 3 1 0 1 1 2 1 0 1 1 0 0 15 0 1706.9607 P26196 P26196 272 286 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 2 0.0024482 101.71 By MS/MS 6 0 1 1 0 0 0 11447 692 12054 28651 20230 20230 0 0 0 QILMASGSTTFTK RVDDESMQRFHNRVRQILMASGSTTFTKIV VRQILMASGSTTFTKIVNKWNTALIGLMTY R Q I T K I 1 0 0 0 0 1 0 1 0 1 1 1 1 1 0 2 3 0 0 0 0 0 13 0 1383.7068 Q6P2Q9 Q6P2Q9 1246 1258 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.029474 60.49 By MS/MS 2 0 1 1 0 0 0 11448 1706 12055 28652 20231 20231 1225 0 0 0 QILNIIER LRDEGHQTLVFSQSRQILNIIERLLKNRHF LVFSQSRQILNIIERLLKNRHFKTLRIDGT R Q I E R L 0 1 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 8 0 997.59203 Q2NKX8 Q2NKX8 487 494 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.021317 91.318 By MS/MS 3 0 1 1 0 0 0 11449 1559 12056 28653 20232 20232 0 0 0 QILQEEGPTAFWK SDPSAKYHGILQASRQILQEEGPTAFWKGH SRQILQEEGPTAFWKGHVPAQILSIGYGAV R Q I W K G 1 0 0 0 0 2 2 1 0 1 1 1 0 1 1 0 1 1 0 0 0 0 13 0 1545.7827 Q9HC21 Q9HC21 68 80 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0049943 93.011 By MS/MS 8 0 1 1 0 0 0 11450 2556 12057 28654 20233 20233 0 0 0 QINDIQLSR AKSGEVLVNVKEHSRQINDIQLSRDMTMFV VKEHSRQINDIQLSRDMTMFVTASKDNTAK R Q I S R D 0 1 1 1 0 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1085.5829 Q13347 Q13347 190 198 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.0013336 136.99 By MS/MS By matching 8 1.07 3 2 1 1 6 1 33989000 33989000 0 11451 1358 12058;12059 28655;28656;28657;28658;28659;28660;28661 20234;20235;20236;20237 20235 2 1801600 0 QINELENGGEILNETR SIRFLAKAIDYEIQRQINELENGGEILNET INELENGGEILNETRSFHHKLGCTMSMRDK R Q I T R S 0 1 3 0 0 1 4 2 0 2 2 0 0 0 0 0 1 0 0 0 0 0 16 0 1827.8963 O75879 O75879 299 314 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 3.6678E-29 246.31 By MS/MS 7 0.816 1 1 1 3 11361000 11361000 0 11452 333 12060 28662;28663;28664 20238 20238 1 117770 0 QINLSNIR IIVRGQPRGGPPPERQINLSNIRAGNLARR GGPPPERQINLSNIRAGNLARRAAATQPDA R Q I I R A 0 1 2 0 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 8 0 956.54033 Q7KZF4 Q7KZF4 48 55 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.017255 110.31 By MS/MS 4 0 1 1 1371700 1371700 0 11453 1757 12061 28665 20239 20239 1 37446 0 QIQELVEAIVLPMNHK ERPTEQYSDIGGLDKQIQELVEAIVLPMNH IQELVEAIVLPMNHKEKFENLGIQPPKGVL K Q I H K E 1 0 1 0 0 2 2 0 1 2 2 1 1 0 1 0 0 0 0 2 0 0 16 0 1861.0132 P17980 P17980 194 209 PSMC3 26S protease regulatory subunit 6A yes yes 2 4.0494E-06 139.48 By MS/MS 6 0 2 2 0 0 0 11454 618 12062;12063 28666;28667 20240;20241;20242;20243 20241 405 0 0 0 QIQLEQDSGK GKKQSQVIPKTVRIKQIQLEQDSGKSLHDN TVRIKQIQLEQDSGKSLHDNLRSQTLIDLN K Q I G K S 0 0 0 1 0 3 1 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1144.5724 O75879 O75879 187 196 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 0.00099833 122.94 By MS/MS 6 0 1 1 13039000 13039000 0 11455 333 12064 28668 20244 20244 1 101680 0 QIQNLQK FLREYFERLEKEEAKQIQNLQKAGTRTDSR RLEKEEAKQIQNLQKAGTRTDSREDEISPP K Q I Q K A 0 0 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 870.49232 P10644 P10644 64 70 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 2.1197E-06 217.27 By MS/MS By matching 6 0 2 1 1 5412100 5354900 57166 11456 542 12065 28669;28670 20245 20245 1 41758 175320 QIQVLQAQLQR EERKAYRNQVEESTKQIQVLQAQLQRLHID ESTKQIQVLQAQLQRLHIDTENLREEKDSE K Q I Q R L 1 1 0 0 0 5 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1323.7623 Q14BN4 Q14BN4 544 554 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.00087825 141.48 By MS/MS 4 0 1 1 0 0 0 11457 1454 12066 28671 20246 20246 0 0 0 QIQVNDEDVR TKDYKKTIGVDFLERQIQVNDEDVRLMLWD DFLERQIQVNDEDVRLMLWDTAGQEEFDAI R Q I V R L 0 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 10 0 1214.5891 Q9ULC3 Q9ULC3 50 59 RAB23 Ras-related protein Rab-23 yes yes 2 1.0409E-06 182.39 By MS/MS 8 0 1 1 807760 807760 0 11458 2823 12067 28672 20247 20247 1 53288 0 QISDGEREELNLTANR LLEMIHSIQNSQDMRQISDGEREELNLTAN ISDGEREELNLTANRLMGRTLTVEVSVETI R Q I N R L 1 2 2 1 0 1 3 1 0 1 2 0 0 0 0 1 1 0 0 0 0 0 16 1 1843.9024 O95816 O95816 71 86 BAG2 BAG family molecular chaperone regulator 2 yes yes 2;3 0.0030371 133.15 By MS/MS 8.5 0.5 2 2 4 2299400 2299400 0 11459 408 12068;12069 28673;28674;28675;28676 20248;20249 20249 1 1040700 0 QISDLMGLIPK TSASSLARAYSIVIRQISDLMGLIPKYNHL IVIRQISDLMGLIPKYNHLVYSQIPAAVKL R Q I P K Y 0 0 0 1 0 1 0 1 0 2 2 1 1 0 1 1 0 0 0 0 0 0 11 0 1213.674 O95071 O95071 1794 1804 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.035493 76.221 By MS/MS 2.5 0.5 1 1 2 206800 206800 0 11460 364 12070 28677;28678 20250 20250 196 1 7405.3 0 QISGQYSGSPQLLK FAQKISRTVAAEVRKQISGQYSGSPQLLKN KQISGQYSGSPQLLKNLNIVGNISHHTTVP K Q I L K N 0 0 0 0 0 3 0 2 0 1 2 1 0 0 1 3 0 0 1 0 0 0 14 0 1504.7886 Q96N67 Q96N67 22 35 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.2325E-05 158.06 By MS/MS 2 0 1 1 259930 259930 0 11461 2230 12071 28679 20251 20251 1 12920 0 QISNLQQSISDAEQR RVIQRLRSEIDNVKKQISNLQQSISDAEQR QISNLQQSISDAEQRGENALKDAKNKLNDL K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1715.8438 P04264;CON__P04264 P04264 418 432 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 6.3189E-92 383.61 By MS/MS By MS/MS 5.25 2.93 4 5 5 4 5 3 3 2 5 4 14 26 17922000 10489000 7433100 + 11462 450;45 12072;12073 28680;28681;28682;28683;28684;28685;28686;28687;28688;28689;28690;28691;28692;28693;28694;28695;28696;28697;28698;28699;28700;28701;28702;28703;28704;28705;28706;28707;28708;28709;28710;28711;28712;28713;28714;28715;28716;28717;28718;28719 20252;20253;20254;20255;20256;20257;20258;20259;20260;20261;20262;20263;20264;20265;20266;20267;20268;20269;20270;20271;20272;20273;20274;20275;20276;20277;20278;20279;20280;20281;20282;20283;20284;20285;20286;20287;20288;20289;20290 20273 25 3346100 21572000 QISPQEFIHELK YINTASKTGSLKRSRQISPQEFIHELKMGS RSRQISPQEFIHELKMGSADERLVTCLESL R Q I L K M 0 0 0 0 0 2 2 0 1 2 1 1 0 1 1 1 0 0 0 0 0 0 12 0 1467.7722 Q9NSV4 Q9NSV4 173 184 DIAPH3 Protein diaphanous homolog 3 yes yes 2 0.022853 88.338 By MS/MS 3 0 1 1 0 0 0 11463 2628 12074 28720 20291 20291 0 0 0 QISQAYEVLSDAK KYHPDKNPNEGEKFKQISQAYEVLSDAKKR FKQISQAYEVLSDAKKRELYDKGGEQAIKE K Q I A K K 2 0 0 1 0 2 1 0 0 1 1 1 0 0 0 2 0 0 1 1 0 0 13 0 1450.7304 P31689 P31689 47 59 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 7.0786E-18 226.33 By MS/MS By MS/MS 7.82 1.47 3 2 2 2 2 10 1 84029000 83939000 89105 11464 755 12075;12076 28721;28722;28723;28724;28725;28726;28727;28728;28729;28730;28731 20292;20293;20294;20295;20296;20297;20298;20299;20300;20301;20302 20295 7 1980700 273280 QISQEHTPVALEAYFVPLVK VEETVVRDKAVESLRQISQEHTPVALEAYF HTPVALEAYFVPLVKRLASGDWFTSRTSAC R Q I V K R 2 0 0 0 0 2 2 0 1 1 2 1 0 1 2 1 1 0 1 3 0 0 20 0 2268.2154 P30154 P30154 126 145 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 2;3 1.3496E-12 160.78 By MS/MS 6 0 2 2 848000 848000 0 11465 738 12077;12078 28732;28733 20303;20304 20304 1 6612.7 0 QISSLRDEVEAK AVEQQIQSHRETHQKQISSLRDEVEAKAKL HQKQISSLRDEVEAKAKLITDLQDQNQKMM K Q I A K A 1 1 0 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 1 1373.7151 P33176 P33176 715 726 KIF5B Kinesin-1 heavy chain yes yes 2 0.017949 118.9 By MS/MS 4.5 0.5 1 1 2 1381900 1381900 0 11466 767 12079 28734;28735 20305 20305 1 42347 0 QISTLESVSTSK MKNNPVHLITEEDLKQISTLESVSTSKKDK DLKQISTLESVSTSKKDKKDERRRKATEGS K Q I S K K 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 4 2 0 0 1 0 0 12 0 1278.6667 O94874 O94874 403 414 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0053149 101.35 By MS/MS 5 0 1 1 0 0 0 11467 354 12080 28736 20306 20306 1 0 0 QISTLESVSTSKK MKNNPVHLITEEDLKQISTLESVSTSKKDK LKQISTLESVSTSKKDKKDERRRKATEGSG K Q I K K D 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 4 2 0 0 1 0 0 13 1 1406.7617 O94874 O94874 403 415 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.044271 61.344 By MS/MS 5 0 1 1 0 0 0 11468 354 12081 28737 20307 20307 0 0 0 QISVADLPGLIEGAHMNK TLKPELGKIMYSDFKQISVADLPGLIEGAH VADLPGLIEGAHMNKGMGHKFLKHIERTRQ K Q I N K G 2 0 1 1 0 1 1 2 1 2 2 1 1 0 1 1 0 0 0 1 0 0 18 0 1891.9826 A4D1E9 A4D1E9 197 214 GTPBP10 GTP-binding protein 10 yes yes 2 0.0062845 92.039 By MS/MS 7 0 1 1 0 0 0 11469 14 12082 28738 20308 20308 3 0 0 0 QITADKQYK IERVKLLLQVQHASKQITADKQYKGIIDCV VQHASKQITADKQYKGIIDCVVRIPKEQGV K Q I Y K G 1 0 0 1 0 2 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 0 9 1 1093.5768 P05141 P05141 44 52 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 2;3 0.0066539 155.58 By MS/MS 4.83 3.53 2 1 2 1 6 1306900 1306900 0 11470 469 12083;12084 28739;28740;28741;28742;28743;28744 20309;20310;20311;20312 20310 2 86217 0 QITEDTVEFGS EYYLHMDGRGNYEFKQITEDTVEFGS____ YEFKQITEDTVEFGS_______________ K Q I G S - 0 0 0 1 0 1 2 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 11 0 1224.551 P28288 P28288 649 659 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.00258 117.89 By MS/MS 5 0 1 1 484220 484220 0 11471 716 12085 28745 20313 20313 1 19903 0 QITLNDLPVGR TLRGLFIIDDKGILRQITLNDLPVGRSVDE GILRQITLNDLPVGRSVDETLRLVQAFQYT R Q I G R S 0 1 1 1 0 1 0 1 0 1 2 0 0 0 1 0 1 0 0 1 0 0 11 0 1224.6826 Q13162 Q13162 213 223 PRDX4 Peroxiredoxin-4 yes yes 2 1.6003E-10 219.72 By MS/MS By MS/MS 8.75 0.829 4 2 2 6 2 5018700 4970100 48617 11472 1343 12086;12087 28746;28747;28748;28749;28750;28751;28752;28753 20314;20315;20316;20317;20318;20319 20316 4 1136100 414760 QITPQQQEK FCGRCIREFLKWSIKQITPQQQEKSPVNTK LKWSIKQITPQQQEKSPVNTKSLFKRLYSL K Q I E K S 0 0 0 0 0 4 1 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 9 0 1098.5669 P78527 P78527 1043 1051 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.9968E-06 177.7 By MS/MS 1.8 0.748 2 2 1 5 6454700 6454700 0 11473 1197 12088;12089 28754;28755;28756;28757;28758 20320;20321;20322;20323 20321 3 300070 0 QITPSLETHLVQR PLPGYGVQYDYLDPRQITPSLETHLVQRLF PRQITPSLETHLVQRLFFAGQINGTTGYEE R Q I Q R L 0 1 0 0 0 2 1 0 1 1 2 0 0 0 1 1 2 0 0 1 0 0 13 0 1520.8311 Q9Y2Z2 Q9Y2Z2 414 426 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.00013835 141.71 By MS/MS 5 0 1 1 0 0 0 11474 2908 12090 28759 20324 20324 0 0 0 QITQSALLAEAR YDVLRGIFTSEIGTKQITQSALLAEARSDY GTKQITQSALLAEARSDYSEAAKQYDEALN K Q I A R S 3 1 0 0 0 2 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1299.7147 P78527 P78527 2951 2962 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.608E-56 303.33 By MS/MS By matching 2.44 1.34 3 2 2 1 1 7 2 21798000 21707000 91223 11475 1197 12091;12092 28760;28761;28762;28763;28764;28765;28766;28767;28768 20325;20326;20327;20328;20329;20330 20325 4 922650 99130 QITQVYGFYDECQTK WPDRITLLRGNHESRQITQVYGFYDECQTK QITQVYGFYDECQTKYGNANAWRYCTKVFD R Q I T K Y 0 0 0 1 1 3 1 1 0 1 0 1 0 1 0 0 2 0 2 1 0 0 15 0 1878.8458 O00743 O00743 118 132 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 6.3236E-63 294.69 By MS/MS 8.5 0.5 2 2 4 2266900 2266900 0 11476 106 12093;12094 28769;28770;28771;28772 20331;20332 20331 1 268490 0 QITSYGETCPGLEQYAIK RLVPGGGATEIELAKQITSYGETCPGLEQY SYGETCPGLEQYAIKKFAEAFEAIPRALAE K Q I I K K 1 0 0 0 1 2 2 2 0 2 1 1 0 0 1 1 2 0 2 0 0 0 18 0 2056.9776 P50990 P50990 422 439 CCT8 T-complex protein 1 subunit theta yes yes 2 2.0261E-43 252.52 By MS/MS 6.83 1.34 1 2 1 1 1 6 52499000 52499000 0 11477 955 12095;12096 28773;28774;28775;28776;28777;28778 20333;20334 20333 1 522650 0 QITSYGETCPGLEQYAIKK RLVPGGGATEIELAKQITSYGETCPGLEQY YGETCPGLEQYAIKKFAEAFEAIPRALAEN K Q I K K F 1 0 0 0 1 2 2 2 0 2 1 2 0 0 1 1 2 0 2 0 0 0 19 1 2185.0725 P50990 P50990 422 440 CCT8 T-complex protein 1 subunit theta yes yes 2;3 7.1413E-26 218.11 By MS/MS 6.19 2.04 1 1 1 2 4 3 2 1 1 16 426620000 426620000 0 11478 955 12097;12098 28779;28780;28781;28782;28783;28784;28785;28786;28787;28788;28789;28790;28791;28792;28793;28794 20335;20336;20337;20338;20339;20340;20341;20342;20343 20336 3 3504400 0 QITVNDLPVGR SFRGLFIIDDKGILRQITVNDLPVGRSVDE GILRQITVNDLPVGRSVDETLRLVQAFQFT R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 Q06830;P32119 Q06830 141 151 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 no no 2 5.6727E-07 185.6 By MS/MS By matching 9.25 0.433 3 1 3 1 22515000 22364000 151270 11479 1277;763 12099;12100 28795;28796;28797;28798 20344;20345;20346 20344 2 13097000 1630200 QIWQNLGLDDTK GGDEAAGLEADLECKQIWQNLGLDDTKILP ECKQIWQNLGLDDTKILPGNMKDNFWEMGD K Q I T K I 0 0 1 2 0 2 0 1 0 1 2 1 0 0 0 0 1 1 0 0 0 0 12 0 1429.7201 P49588 P49588 154 165 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 4.4919E-11 205.13 By MS/MS 4.33 0.471 2 1 3 1796000 1796000 0 11480 921 12101;12102 28799;28800;28801 20347;20348;20349 20347 1 49028 0 QKADEAYLIGR TVAIYSEQDTGQMHRQKADEAYLIGRGLAP QMHRQKADEAYLIGRGLAPVQAYLHIPDII R Q K G R G 2 1 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 11 1 1262.6619 P11498 P11498 78 88 PC Pyruvate carboxylase, mitochondrial yes yes 2;3 0.0029342 125.75 By MS/MS 4.33 0.471 2 1 3 1448100 1448100 0 11481 555 12103;12104 28802;28803;28804 20350;20351 20350 1 39531 0 QKEEESQQQAVLEQERR DEKRIQAEVEAQLARQKEEESQQQAVLEQE EEESQQQAVLEQERRDRELALRIAQSEAEL R Q K R R D 1 2 0 0 0 5 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 17 2 2114.0352 Q9UM54 Q9UM54 992 1008 MYO6 Unconventional myosin-VI yes yes 3 0.0032513 86.539 By MS/MS 3 0 1 1 0 0 0 11482 2833 12105 28805 20352 20352 0 0 0 QKEGNFDIVSGTR DLSHHPKFIPEFIRKQKEGNFDIVSGTRYK RKQKEGNFDIVSGTRYKGNGGVYGWDLKRK K Q K T R Y 0 1 1 1 0 1 1 2 0 1 0 1 0 1 0 1 1 0 0 1 0 0 13 1 1449.7212 O60762 O60762 135 147 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2;3 1.3563E-06 227.48 By MS/MS By matching 8.75 0.829 4 2 2 7 1 17019000 16981000 38490 11483 263 12106;12107 28806;28807;28808;28809;28810;28811;28812;28813 20353;20354;20355 20355 2 1335500 328360 QKELEAASAPEER EFEKDKADDDVFEKKQKELEAASAPEERTR KKQKELEAASAPEERTRLHDELEEAKDKAR K Q K E R T 3 1 0 0 0 1 4 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 13 1 1456.7158 O43432 O43432 859 871 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2;3 0.044155 114.87 By MS/MS 2 0 2 2 327150 327150 0 11484 200 12108;12109 28814;28815 20356;20357 20356 1 16261 0 QKEMDEAATAEER EFEKDKDDDEVFEKKQKEMDEAATAEERGR KKQKEMDEAATAEERGRLKEELEEARDIAR K Q K E R G 3 1 0 1 0 1 4 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 13 1 1506.662 Q04637 Q04637 865 877 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 1.4033E-17 219.43 By MS/MS 2 0 4 4 4115400 4115400 0 11485 1264 12110;12111;12112 28816;28817;28818;28819 20358;20359;20360;20361;20362 20359 1023 4 204560 0 QKEMDEAATAEERGR EFEKDKDDDEVFEKKQKEMDEAATAEERGR QKEMDEAATAEERGRLKEELEEARDIARRR K Q K G R L 3 2 0 1 0 1 4 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 15 2 1719.7846 Q04637 Q04637 865 879 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.042114 67.095 By MS/MS 2 0 1 1 0 0 0 11486 1264 12113 28820 20363 20363 0 0 0 QKEMLQAQLDR KKKKGIKEEVQLTSKQKEMLQAQLDREAQV LTSKQKEMLQAQLDREAQVRRRLQELDGEL K Q K D R E 1 1 0 1 0 3 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 11 1 1358.6976 Q92616 Q92616 830 840 GCN1L1 Translational activator GCN1 yes yes 2 0.005283 163.9 By MS/MS 2 0 1 1 0 0 0 11487 2068 12114 28821 20364 20364 0 0 0 QKEQAIGAIR EQLELGLKRQKPTPKQKEQAIGAIRTLRSK KPTPKQKEQAIGAIRTLRSKRTPLPRKRQL K Q K I R T 2 1 0 0 0 2 1 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 10 1 1112.6302 Q9H7E9 Q9H7E9 134 143 C8orf33 UPF0488 protein C8orf33 yes yes 2 0.015587 125.71 By MS/MS 8.5 0.5 1 1 2 0 0 0 11488 2516 12115 28822;28823 20365 20365 0 0 0 QKEVEQLIK TLTRENGKTVIRVLKQKEVEQLIKKHEEEE VIRVLKQKEVEQLIKKHEEEEAKAEREKKE K Q K I K K 0 0 0 0 0 2 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1113.6394 P25789 P25789 230 238 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.017859 131.62 By MS/MS By matching 8.5 0.764 4 1 1 4 2 4729400 4694700 34771 11489 691 12116;12117 28824;28825;28826;28827;28828;28829 20366;20367 20366 1 309710 296640 QKEVITAQDTVIK KNKESVNKAQEEVTKQKEVITAQDTVIKAK TKQKEVITAQDTVIKAKYAEVAKHKEQNND K Q K I K A 1 0 0 1 0 2 1 0 0 2 0 2 0 0 0 0 2 0 0 2 0 0 13 1 1471.8246 O95347 O95347 878 890 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 5.2729E-24 238.01 By MS/MS 3.33 0.471 2 1 3 765530 765530 0 11490 385 12118;12119 28830;28831;28832 20368;20369 20369 1 19984 0 QKFGMAEAAADSDIFEQLLK Q K L K 4 0 0 2 0 2 2 1 0 1 2 2 1 2 0 1 0 0 0 0 0 0 20 1 2211.0882 REV__O75556 yes yes 3 0.0092731 63.691 By MS/MS 5.33 2.62 1 1 1 3 715850000 715850000 0 + 11491 3019 12120 28833;28834;28835 20370;20371 20370 2 134750000 0 QKGADFLVTEVENGGSLGSK SKIYVDDGLISLQVKQKGADFLVTEVENGG FLVTEVENGGSLGSKKGVNLPGAAVDLPAV K Q K S K K 1 0 1 1 0 1 2 4 0 0 2 2 0 1 0 2 1 0 0 2 0 0 20 1 2035.0222 P14618 P14618 187 206 PKM Pyruvate kinase PKM yes yes 2 5.4225E-11 210.08 By MS/MS 6 0 1 1 0 0 0 11492 588 12121 28836 20372 20372 0 0 0 QKIHPTSVISGYR IIAAELLKNADELVKQKIHPTSVISGYRLA VKQKIHPTSVISGYRLACKEAVRYINENLI K Q K Y R L 0 1 0 0 0 1 0 1 1 2 0 1 0 0 1 2 1 0 1 1 0 0 13 1 1484.81 P17987 P17987 110 122 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.0011193 89.507 By MS/MS 3.5 2.5 1 1 2 0 0 0 11493 619 12122 28837;28838 20373;20374 20374 0 0 0 QKIVQAEGEAEAAK QRAQFLVEKAKQEQRQKIVQAEGEAEAAKM RQKIVQAEGEAEAAKMLGEALSKNPGYIKL R Q K A K M 4 0 0 0 0 2 3 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 14 1 1470.7678 Q99623 Q99623 223 236 PHB2 Prohibitin-2 yes yes 2;3 1.1991E-16 216.91 By MS/MS By MS/MS 8 0 4 2 2 10300000 10095000 204730 11494 2277 12123;12124 28839;28840;28841;28842 20375;20376;20377 20376 1 665960 1746600 QKLYTLQDK PTRVTAIHIDPATHRQKLYTLQDKAQVADV DPATHRQKLYTLQDKAQVADVVVSRWLRVT R Q K D K A 0 0 0 1 0 2 0 0 0 0 2 2 0 0 0 0 1 0 1 0 0 0 9 1 1135.6237 P49327 P49327 1064 1072 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00049212 160.59 By MS/MS 2.17 1.07 2 2 1 1 6 1929300 1929300 0 11495 915 12125;12126 28843;28844;28845;28846;28847;28848 20378;20379;20380 20379 2 77510 0 QKPITPETAEK LRDDPSTIEKLAKNKQKPITPETAEKLARD AKNKQKPITPETAEKLARDLKAVKYVECSA K Q K E K L 1 0 0 0 0 1 2 0 0 1 0 2 0 0 2 0 2 0 0 0 0 0 11 1 1240.6663 P60953 P60953 134 144 CDC42 Cell division control protein 42 homolog yes yes 2;3 0.022983 128.51 By MS/MS 9.4 0.49 3 2 5 1688800 1688800 0 11496 1078 12127;12128 28849;28850;28851;28852;28853 20381;20382 20382 1 1012600 0 QKPSNTEDFIEDIVK FTASFNRPNLYYEVRQKPSNTEDFIEDIVK QKPSNTEDFIEDIVKLINGRYKGQSGIIYC R Q K V K L 0 0 1 2 0 1 2 0 0 2 0 2 0 1 1 1 1 0 0 1 0 0 15 1 1761.8785 P46063 P46063 292 306 RECQL ATP-dependent DNA helicase Q1 yes yes 2 0.00016382 148.41 By MS/MS 5 0 1 1 0 0 0 11497 877 12129 28854 20383 20383 0 0 0 QKVDSLLENLEK GDDLQAIKKELTQIKQKVDSLLENLEKIEK QIKQKVDSLLENLEKIEKEQSKQAVEMKND K Q K E K I 0 0 1 1 0 1 2 0 0 0 3 2 0 0 0 1 0 0 0 1 0 0 12 1 1414.7668 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 205 216 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 6.805E-23 245.13 By MS/MS 7 0 2 2 0 0 0 11498 495 12130;12131 28855;28856 20384;20385 20384 1 0 0 QKVEHIEWFR LVTCGLSKNPYLSVKQKVEHIEWFRNYFNE YLSVKQKVEHIEWFRNYFNEKKDILKESNI K Q K F R N 0 1 0 0 0 1 2 0 1 1 0 1 0 1 0 0 0 1 0 1 0 0 10 1 1370.7095 Q92665 Q92665 368 377 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 3 0.0043258 96.113 By MS/MS 7 0 1 1 0 0 0 11499 2073 12132 28857 20386 20386 0 0 0 QKVENLFNEK EFSFEAWNAKITDLKQKVENLFNEKCGEAL ITDLKQKVENLFNEKCGEALGLKQAVKVPF K Q K E K C 0 0 2 0 0 1 2 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 10 1 1247.651 P78347 P78347 735 744 GTF2I General transcription factor II-I yes yes 2 0.0096018 141.91 By MS/MS 3.5 0.5 1 1 2 0 0 0 11500 1194 12133 28858;28859 20387 20387 0 0 0 QKVEQNAAPSHTK TICTGARQLQDAAAKQKVEQNAAPSHTKFS AKQKVEQNAAPSHTKFSIYPPIPGEESSLR K Q K T K F 2 0 1 0 0 2 1 0 1 0 0 2 0 0 1 1 1 0 0 1 0 0 13 1 1436.7372 P82912 P82912 47 59 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2;3 0.018989 116.74 By MS/MS 10 0 2 2 100870 100870 0 11501 1206 12134;12135 28860;28861 20388;20389 20389 1 107220 0 QLAALGQTEPLPAEAPWAR QARALLEREAEEARRQLAALGQTEPLPAEA LGQTEPLPAEAPWARRPVDPRRRSLPAGDA R Q L A R R 5 1 0 0 0 2 2 1 0 0 3 0 0 0 3 0 1 1 0 0 0 0 19 0 2018.0585 Q92974 Q92974 859 877 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 4.6666E-05 162.41 By MS/MS 4 0 2 2 412090 412090 0 11502 2094 12136;12137 28862;28863 20390;20391 20391 1 11250 0 QLAEEQKRR WYPSLATMQESLRVKQLAEEQKRREREQHI ESLRVKQLAEEQKRREREQHIAECMAKMPQ K Q L R R E 1 2 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 2 1156.6313 Q8TAE8 Q8TAE8 107 115 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.011624 136.27 By MS/MS 9 0 1 1 131710 131710 0 11503 1980 12138 28864 20392 20392 1 75588 0 QLAEFVPLDYSVPIEIPTIK YQIDDKPNNQIRISKQLAEFVPLDYSVPIE VPLDYSVPIEIPTIKCKPDKLPLFKRQYEN K Q L I K C 1 0 0 1 0 1 2 0 0 3 2 1 0 1 3 1 1 0 1 2 0 0 20 0 2271.2402 Q9NP92 Q9NP92 246 265 MRPS30 28S ribosomal protein S30, mitochondrial yes yes 2 1.2619E-05 134.81 By MS/MS 6 0 1 1 433410 433410 0 11504 2578 12139 28865 20393 20393 1 3379.7 0 QLAELAISK AYQLAVEAESEQKWKQLAELAISKCQFGLA SEQKWKQLAELAISKCQFGLAQECLHHAQD K Q L S K C 2 0 0 0 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 971.56515 P35606 P35606 672 680 COPB2 Coatomer subunit beta yes yes 2 0.037615 82.261 By MS/MS 1 0 1 1 0 0 0 11505 795 12140 28866 20394 20394 0 0 0 QLAGILQVPLEER ETYGSGTQYHMQLAKQLAGILQVPLEERGG AKQLAGILQVPLEERGGIMSLTEVYCLVNR K Q L E R G 1 1 0 0 0 2 2 1 0 1 3 0 0 0 1 0 0 0 0 1 0 0 13 0 1464.83 Q86VN1 Q86VN1 248 260 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 2 0.0015634 124.42 By MS/MS 7 0 1 1 266730 266730 0 11506 1828 12141 28867 20395 20395 1 4766.6 0 QLAIIGDDINR TLPLQPSSTMGQVGRQLAIIGDDINRRYDS QVGRQLAIIGDDINRRYDSEFQTMLQHLQP R Q L N R R 1 1 1 2 0 1 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1226.6619 Q16611 Q16611 77 87 BAK1 Bcl-2 homologous antagonist/killer yes yes 2 0.0035243 113.93 By MS/MS 9 0 1 1 445100 445100 0 11507 1542 12142 28868 20396 20396 1 255450 0 QLAQYHAK VGSGTNNARLAAMLRQLAQYHAKDPNNLFM RLAAMLRQLAQYHAKDPNNLFMVRLAQGLT R Q L A K D 2 0 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 8 0 957.50321 Q13200 Q13200 747 754 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.0069065 111.65 By MS/MS 4 0 1 1 0 0 0 11508 1347 12143 28869 20397 20397 0 0 0 QLASVILK LAELTVDPQGALAIRQLASVILKQYVETHW QGALAIRQLASVILKQYVETHWCAQSEKFR R Q L L K Q 1 0 0 0 0 1 0 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 8 0 870.55385 Q96P70 Q96P70 75 82 IPO9 Importin-9 yes yes 2 0.019809 107.01 By MS/MS 4 0 1 1 1133700 1133700 0 11509 2237 12144 28870 20398 20398 1 30950 0 QLAVYEEFAR MPEQIRLKVGGVDPKQLAVYEEFARNVPGF GVDPKQLAVYEEFARNVPGFLPTNDLSQPT K Q L A R N 2 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1224.6139 A5YKK6 A5YKK6 1568 1577 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.010439 99.013 By MS/MS 2 0.816 1 1 1 3 639710 639710 0 11510 19 12145 28871;28872;28873 20399;20400 20399 2 23519 0 QLCDNAGFDATNILNK LLIGAYAKALEIIPRQLCDNAGFDATNILN LCDNAGFDATNILNKLRARHAQGGTWYGVD R Q L N K L 2 0 3 2 1 1 0 1 0 1 2 1 0 1 0 0 1 0 0 0 0 0 16 0 1792.8414 Q99832 Q99832 448 463 CCT7 T-complex protein 1 subunit eta yes yes 2;3 1.6831E-63 290.1 By MS/MS 5.4 2.82 2 2 2 2 2 3 2 1 2 2 20 286320000 286320000 0 11511 2295 12146;12147 28874;28875;28876;28877;28878;28879;28880;28881;28882;28883;28884;28885;28886;28887;28888;28889;28890;28891;28892;28893 20401;20402;20403;20404;20405;20406;20407;20408;20409;20410;20411;20412;20413;20414;20415 20413 9 2807300 0 QLCDNAGFDATNILNKLR LLIGAYAKALEIIPRQLCDNAGFDATNILN DNAGFDATNILNKLRARHAQGGTWYGVDIN R Q L L R A 2 1 3 2 1 1 0 1 0 1 3 1 0 1 0 0 1 0 0 0 0 0 18 1 2062.0266 Q99832 Q99832 448 465 CCT7 T-complex protein 1 subunit eta yes yes 3 0.0089315 75.445 By MS/MS 6 0 1 1 4447200 4447200 0 11512 2295 12148 28894 20416 20416 1 34679 0 QLCEQAPSTSVLLLSPQPMGK TVSAESLSVLVKVVRQLCEQAPSTSVLLLS PSTSVLLLSPQPMGKVLCACQVAQGAMPTF R Q L G K V 1 0 0 0 1 3 1 1 0 0 4 1 1 0 3 3 1 0 0 1 0 0 21 0 2283.1603 Q5JTZ9 Q5JTZ9 902 922 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 3 0.0056622 63.447 By MS/MS 4.5 0.5 1 1 2 0 0 0 11513 1611 12149 28895;28896 20417 20417 1196 0 0 0 QLCGGSQAAIER DCDTEMEVDSSQLRRQLCGGSQAAIERMIH LRRQLCGGSQAAIERMIHFGRELQAMSEQL R Q L E R M 2 1 0 0 1 2 1 2 0 1 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1288.6194 Q96S59 Q96S59 608 619 RANBP9 Ran-binding protein 9 yes yes 2 0.00025457 150.09 By MS/MS 4.5 0.5 1 1 2 1790400 1790400 0 11514 2254 12150 28897;28898 20418 20418 1 51353 0 QLDDEEVSEFALDGLK IGHQALEDILPFLLKQLDDEEVSEFALDGL LDDEEVSEFALDGLKQVMAIKSRVVLPYLV K Q L L K Q 1 0 0 3 0 1 3 1 0 0 3 1 0 1 0 1 0 0 0 1 0 0 16 0 1806.8523 Q92616 Q92616 2051 2066 GCN1L1 Translational activator GCN1 yes yes 2 6.0402E-08 206.45 By MS/MS 3 0.816 2 2 2 6 963640 963640 0 11515 2068 12151;12152 28899;28900;28901;28902;28903;28904 20419;20420;20421;20422 20419 2 38002 0 QLDDKDEEINQQSQLVEK AERRKCEEEIAKLYKQLDDKDEEINQQSQL DKDEEINQQSQLVEKLKTQMLDQEELLAST K Q L E K L 0 0 1 3 0 4 3 0 0 1 2 2 0 0 0 1 0 0 0 1 0 0 18 1 2158.039 P33176 P33176 431 448 KIF5B Kinesin-1 heavy chain yes yes 3 1.7141E-07 150.92 By MS/MS 3.5 0.5 1 1 2 2293700 2293700 0 11516 767 12153 28905;28906 20423 20423 1 62460 0 QLDECASAITK HKLKAQQDKLDKINKQLDECASAITKAQVA KINKQLDECASAITKAQVAIKTADRNLQKA K Q L T K A 2 0 0 1 1 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1234.5864 Q9NTJ3 Q9NTJ3 912 922 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0017243 123.96 By MS/MS 3 0 1 1 3237900 3237900 0 11517 2630 12154 28907 20424 20424 1 84524 0 QLDEPKLER EVEERLQKEQEKLQRQLDEPKLERRPRERH QEKLQRQLDEPKLERRPRERHPSWRSEETQ R Q L E R R 0 1 0 1 0 1 2 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 9 1 1126.5982 P23588 P23588 390 398 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 0.009718 151.44 By matching By MS/MS 5.2 0.4 4 1 3 2 3965900 3655200 310690 11518 672 12155;12156 28908;28909;28910;28911;28912 20425;20426 20426 1 122160 919340 QLDEVVSENQR SENEQLKKENGTLKRQLDEVVSENQRLKVP TLKRQLDEVVSENQRLKVPSPKRRVVCVMI R Q L Q R L 0 1 1 1 0 2 2 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 11 0 1315.6368 P18850 P18850 358 368 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 0.0051475 107.11 By MS/MS 4.5 0.5 1 1 2 1120600 1120600 0 11519 626 12157 28913;28914 20427 20427 1 33201 0 QLDEYSSSVANFLQAR TALIFEGTDTHWTFRQLDEYSSSVANFLQA LDEYSSSVANFLQARGLASGDVAAIFMENR R Q L A R G 2 1 1 1 0 2 1 0 0 0 2 0 0 1 0 3 0 0 1 1 0 0 16 0 1826.8799 Q6P1M0 Q6P1M0 106 121 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.00098901 138.42 By MS/MS 2 0 1 1 0 0 0 11520 1701 12158 28915 20428 20428 0 0 0 QLDFNSSKDVAVMQLR VHGNMLHYVKDRFLRQLDFNSSKDVAVMQL LDFNSSKDVAVMQLRSGSKFPVFNMSYNPA R Q L L R S 1 1 1 2 0 2 0 0 0 0 2 1 1 1 0 2 0 0 0 2 0 0 16 1 1849.9356 P53621 P53621 343 358 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.029453 63.181 By MS/MS 1.75 0.829 2 1 1 4 0 0 0 11521 1005 12159 28916;28917;28918;28919 20429;20430 20430 779 0 0 0 QLDGELGHLCR LIHAETEAQRRQALRQLDGELGHLCRGWAE QALRQLDGELGHLCRGWAETLTKALAHVEA R Q L C R G 0 1 0 1 1 1 1 2 1 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1296.6245 Q969Y2 Q969Y2 179 189 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 0.0073335 91.855 By MS/MS 6.5 0.5 1 1 2 0 0 0 11522 2111 12160 28920;28921 20431 20431 0 0 0 QLDPDLVEAQR LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQ RDGRQLDPDLVEAQRKKLQEMVSSIQASMD R Q L Q R K 1 1 0 2 0 2 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 11 0 1282.6517 Q96JH7 Q96JH7 1096 1106 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.0026238 117.71 By MS/MS 3 0 1 1 391450 391450 0 11523 2209 12161 28922 20432 20432 1 10219 0 QLDSIVGER NLEPLFEQYINNLRRQLDSIVGERGRLDSE INNLRRQLDSIVGERGRLDSELRNMQDLVE R Q L E R G 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 CON__P02538;P02538;CON__P48668;P48668;CON__P13647;P13647 CON__P13647 229 237 KRT6A;KRT6C;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 5 no no 2 0.0028989 120.31 By MS/MS By MS/MS 6 2.04 1 2 3 2 1 1 1 1 6 6 3171100 1753100 1417900 + 11524 50;36;53 12162;12163 28923;28924;28925;28926;28927;28928;28929;28930;28931;28932;28933;28934 20433;20434;20435;20436;20437;20438;20439;20440 20434 6 549930 3809100 QLEDGRTLSDYNIQK EGIPPDQQRLIFAGKQLEDGRTLSDYNIQK QLEDGRTLSDYNIQKESTLHLVLRLRGGAK K Q L Q K E 0 1 1 2 0 2 1 1 0 1 2 1 0 0 0 1 1 0 1 0 0 0 15 1 1778.8799 P62979;P0CG47;P0CG48 P62979 49 63 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 3 0.0163 73.386 By MS/MS 2 0.816 1 1 1 3 1301500 1301500 0 11525 1165 12164 28935;28936;28937 20441 20441 1 44523 0 QLEEAEEEATR EQMEKANARMKQLKRQLEEAEEEATRANAS QLKRQLEEAEEEATRANASRRKLQRELDDA R Q L T R A 2 1 0 0 0 1 5 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 11 0 1303.5892 P35580 P35580 1885 1895 MYH10 Myosin-10 yes yes 2 1.2875E-17 232.88 By MS/MS By matching 2 0 2 1 1 436790 405050 31738 11526 794 12165 28938;28939 20442 20442 1 20133 26720 QLEEEGITFVPR SNIKKGKEIIEYYLRQLEEEGITFVPRWSP YLRQLEEEGITFVPRWSPPSITTSSETSSS R Q L P R W 0 1 0 0 0 1 3 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 12 0 1416.7249 Q92503 Q92503 169 180 SEC14L1 SEC14-like protein 1 yes yes 2 0.02624 70.977 By MS/MS 5 0 1 1 0 0 0 11527 2052 12166 28940 20443 20443 0 0 0 QLELENLTTQETR LTLISEDIKSYYTVRQLELENLTTQETREI VRQLELENLTTQETREILHFHYTTWPDFGV R Q L T R E 0 1 1 0 0 2 3 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 13 0 1573.7948 P18031 P18031 157 169 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 1.5092E-87 340.88 By MS/MS By matching 6.17 2.54 1 2 1 1 1 5 1 39269000 39225000 44053 11528 620 12167 28941;28942;28943;28944;28945;28946 20444;20445;20446;20447 20447 4 513580 135110 QLEQELHK HELMVADRRQKREIRQLEQELHKWQVLVDS RQKREIRQLEQELHKWQVLVDSITGMSSPD R Q L H K W 0 0 0 0 0 2 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 8 0 1023.5349 Q96EZ8 Q96EZ8 318 325 MCRS1 Microspherule protein 1 yes yes 2 0.012155 116.9 By MS/MS By matching 3.33 0.471 2 1 2 1 5009600 4987300 22378 11529 2172 12168 28947;28948;28949 20448 20448 1 130980 32072 QLEQTLQQFNIK LFHNAVSAYFAGNQKQLEQTLQQFNIKLRP NQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ K Q L I K L 0 0 1 0 0 4 1 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 12 0 1488.7936 P53365 P53365 315 326 ARFIP2 Arfaptin-2 yes yes 2 0.0013098 115.7 By MS/MS 6.5 0.5 1 1 2 0 0 0 11530 999 12169 28950;28951 20449 20449 0 0 0 QLESHLSLGR LQRHGASPELQKQIRQLESHLSLGRKLLRL QKQIRQLESHLSLGRKLLRLGNSADALESA R Q L G R K 0 1 0 0 0 1 1 1 1 0 3 0 0 0 0 2 0 0 0 0 0 0 10 0 1138.6095 O96011 O96011 47 56 PEX11B Peroxisomal membrane protein 11B yes yes 2 0.0017277 110.53 By MS/MS 9 0 1 1 0 0 0 11531 421 12170 28952 20450 20450 0 0 0 QLEVEPEEPEAENK LRMIVMGHRRVHISRQLEVEPEEPEAENKH RQLEVEPEEPEAENKHKPRRKSKRGKKEAE R Q L N K H 1 0 1 0 0 1 6 0 0 0 1 1 0 0 2 0 0 0 0 1 0 0 14 0 1639.7577 P36776 P36776 219 232 LONP1 Lon protease homolog, mitochondrial yes yes 2 2.2823E-12 208.17 By MS/MS 4 0 1 1 582040 582040 0 11532 809 12171 28953 20451 20451 1 15889 0 QLEVEPEEPEAENKHKPR LRMIVMGHRRVHISRQLEVEPEEPEAENKH VEPEEPEAENKHKPRRKSKRGKKEAEDELS R Q L P R R 1 1 1 0 0 1 6 0 1 0 1 2 0 0 3 0 0 0 0 1 0 0 18 2 2158.0655 P36776 P36776 219 236 LONP1 Lon protease homolog, mitochondrial yes yes 4 0.0092352 72.662 By MS/MS By matching 4 0 2 1 1 560090 541620 18471 11533 809 12172 28954;28955 20452 20452 1 14786 38597 QLEVVHTLDGK ERNCIEIVNKLIAQKQLEVVHTLDGKEYIT IAQKQLEVVHTLDGKEYITPAQISKEMRDE K Q L G K E 0 0 0 1 0 1 1 1 1 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1237.6667 O94874 O94874 44 54 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0020103 108.9 By MS/MS 5 0 1 1 0 0 0 11534 354 12173 28956 20453 20453 0 0 0 QLEVYTSGGDPESVAGEYGR LNVLHSLVDKSNINRQLEVYTSGGDPESVA TSGGDPESVAGEYGRHSLYKMLGYFSLVGL R Q L G R H 1 1 0 1 0 1 3 4 0 0 1 0 0 0 1 2 1 0 2 2 0 0 20 0 2112.96 Q9Y262 Q9Y262 243 262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 1.1524E-76 306.53 By MS/MS By MS/MS 5 1.77 1 3 2 1 5 2 29608000 29494000 113280 11535 2868 12174;12175 28957;28958;28959;28960;28961;28962;28963 20454;20455;20456;20457;20458 20457 4 634530 345200 QLFDVVIVQADKPSFFTDR FVDKGMRHMVGPDWRQLFDVVIVQADKPSF VVIVQADKPSFFTDRRKPFRKLDEKGSLQW R Q L D R R 1 1 0 3 0 2 0 0 0 1 1 1 0 3 1 1 1 0 0 3 0 0 19 1 2224.1528 Q9H857 Q9H857 289 307 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.05285 94.532 By MS/MS 6 0 1 1 0 0 0 11536 2522 12176 28964 20459 20459 0 0 0 QLFHPEQLITGK LEPTVIDEVRTGTYRQLFHPEQLITGKEDA TYRQLFHPEQLITGKEDAANNYARGHYTIG R Q L G K E 0 0 0 0 0 2 1 1 1 1 2 1 0 1 1 0 1 0 0 0 0 0 12 0 1409.7667 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 85 96 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3 0.0002964 158.47 By MS/MS 6.83 2.03 1 1 1 2 2 2 2 1 12 279390000 279390000 0 11537 1185;1754;2314;1186 12177 28965;28966;28967;28968;28969;28970;28971;28972;28973;28974;28975;28976 20460;20461;20462;20463 20461 4 3788300 0 QLFHPEQLITGKEDAANNYAR LEPTVIDEVRTGTYRQLFHPEQLITGKEDA QLITGKEDAANNYARGHYTIGKEIIDLVLD R Q L A R G 3 1 2 1 0 2 2 1 1 1 2 1 0 1 1 0 1 0 1 0 0 0 21 1 2414.1979 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;P68366 P68363 85 105 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3;4 8.0343E-06 154.81 By MS/MS 6.18 1.65 1 1 3 7 2 1 1 1 17 919040000 919040000 0 11538 1185;1754;2314;1186 12178;12179 28977;28978;28979;28980;28981;28982;28983;28984;28985;28986;28987;28988;28989;28990;28991;28992;28993 20464;20465;20466;20467;20468;20469;20470;20471;20472;20473;20474;20475;20476 20466 5 7186100 0 QLFKDNPFK ARPFRRLEASRDQLRQLFKDNPFKLHLIEE SRDQLRQLFKDNPFKLHLIEEKVTGPTATV R Q L F K L 0 0 1 1 0 1 0 0 0 0 1 2 0 2 1 0 0 0 0 0 0 0 9 1 1135.6026 Q9BW92 Q9BW92 207 215 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 2.5618E-05 190.26 By MS/MS 5.5 1.12 1 1 1 1 4 0 0 0 11539 2391 12180 28994;28995;28996;28997 20477 20477 0 0 0 QLFLDVLDGTK THADIMHLTDSVVRRQLFLDVLDGTKALLL VVRRQLFLDVLDGTKALLLVPASVNCLRLG R Q L T K A 0 0 0 2 0 1 0 1 0 0 3 1 0 1 0 0 1 0 0 1 0 0 11 0 1247.6762 Q5SRE5 Q5SRE5 1131 1141 NUP188 Nucleoporin NUP188 homolog yes yes 2 0.037249 80.102 By MS/MS 3 0 1 1 216900 216900 0 11540 1618 12181 28998 20478 20478 1 5662.2 0 QLFLEPSQALGPPEPPEAR GNLMSAMLHVEALERQLFLEPSQALGPPEP EPSQALGPPEPPEARVPGKAQPEVDTKAEP R Q L A R V 2 1 0 0 0 2 3 1 0 0 3 0 0 1 5 1 0 0 0 0 0 0 19 0 2075.0688 O75127 O75127 387 405 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 2.7222E-07 142.95 By MS/MS 5 0 2 2 2051500 2051500 0 11541 280 12182;12183 28999;29000 20479;20480 20479 1 84324 0 QLFLGGVDR FPTQALNFAFKDKYKQLFLGGVDRHKQFWR FKDKYKQLFLGGVDRHKQFWRYFAGNLASG K Q L D R H 0 1 0 1 0 1 0 2 0 0 2 0 0 1 0 0 0 0 0 1 0 0 9 0 1003.5451 P12235 P12235 97 105 SLC25A4 ADP/ATP translocase 1 yes yes 2 0.0017265 132.76 By MS/MS 5 3.08 1 1 2 4 9690000 9690000 0 11542 562 12184;12185 29001;29002;29003;29004 20481;20482;20483;20484 20481 3 599810 0 QLFLITNSPFSFVDK DETFAVLSRLVAHGKQLFLITNSPFSFVDK QLFLITNSPFSFVDKGMRHMVGPDWRQLFD K Q L D K G 0 0 1 1 0 1 0 0 0 1 2 1 0 3 1 2 1 0 0 1 0 0 15 0 1754.9243 Q9H857 Q9H857 263 277 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.0009298 139.46 By MS/MS 6 0 2 2 3193900 3193900 0 11543 2522 12186;12187 29005;29006 20485;20486;20487;20488 20487 1 24906 0 QLFLQTYAR LLHDQVGVIQFGPYKQLFLQTYARGRTTYQ QFGPYKQLFLQTYARGRTTYQALPCLPSMY K Q L A R G 1 1 0 0 0 2 0 0 0 0 2 0 0 1 0 0 1 0 1 0 0 0 9 0 1138.6135 P53621 P53621 957 965 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00022481 162.49 By MS/MS 3 1.41 2 2 2 1 7 1998700 1998700 0 11544 1005 12188;12189 29007;29008;29009;29010;29011;29012;29013 20489;20490;20491;20492 20489 2 63461 0 QLGDAFADLSLK QTLSTQLFQMVHTQRQLGDAFADLSLKSLE TQRQLGDAFADLSLKSLELHEEFGYNADTQ R Q L L K S 2 0 0 2 0 1 0 1 0 0 3 1 0 1 0 1 0 0 0 0 0 0 12 0 1276.6663 P53367 P53367 195 206 ARFIP1 Arfaptin-1 yes yes 2 0.00025457 150.09 By MS/MS 7 0 1 1 722080 722080 0 11545 1000 12190 29014 20493 20493 1 12904 0 QLGEANEEFALR PFTVYQVRWLRPVHRQLGEANEEFALRVQQ VHRQLGEANEEFALRVQQLVAKELGQTGTR R Q L L R V 2 1 1 0 0 1 3 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1375.6732 Q9Y679 Q9Y679 232 243 AUP1 Ancient ubiquitous protein 1 yes yes 2 6.119E-07 177.44 By MS/MS 6.2 2.79 1 1 1 1 1 5 50353000 50353000 0 11546 2997 12191 29015;29016;29017;29018;29019 20494;20495;20496 20495 3 2250500 0 QLGELLTDGVR KYLEYERRHGSGEWRQLGELLTDGVRSFRE GEWRQLGELLTDGVRSFREPAPAEALPQQY R Q L V R S 0 1 0 1 0 1 1 2 0 0 3 0 0 0 0 0 1 0 0 1 0 0 11 0 1199.651 Q8IU81 Q8IU81 329 339 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.00012553 157.97 By MS/MS 5 0 2 2 872800 872800 0 11547 1852 12192;12193 29020;29021 20497;20498 20497 1 35876 0 QLHDDYFYHDEL NPDLFLTSEATDYGRQLHDDYFYHDEL___ YGRQLHDDYFYHDEL_______________ R Q L E L - 0 0 0 3 0 1 1 0 2 0 2 0 0 1 0 0 0 0 2 0 0 0 12 0 1593.6736 Q14257 Q14257 306 317 RCN2 Reticulocalbin-2 yes yes 2 7.031E-11 199.89 By MS/MS 7.17 1.07 2 2 1 1 6 40992000 40992000 0 11548 1426 12194;12195 29022;29023;29024;29025;29026;29027 20499;20500;20501;20502;20503 20499 2 340520 0 QLHLNQLIR RISHLPLVEELRSLRQLHLNQLIRTSGVVT ELRSLRQLHLNQLIRTSGVVTSCTGVLPQL R Q L I R T 0 1 1 0 0 2 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 9 0 1133.6669 P49736 P49736 299 307 MCM2 DNA replication licensing factor MCM2 yes yes 3 0.024299 82.75 By MS/MS 3.5 0.5 1 1 2 1292300 1292300 0 11549 928 12196 29028;29029 20504 20504 1 34994 0 QLILLAQQMK ENLRDAVQLNVIATRQLILLAQQMKNLEVF VIATRQLILLAQQMKNLEVFMHVSTAYAYC R Q L M K N 1 0 0 0 0 3 0 0 0 1 3 1 1 0 0 0 0 0 0 0 0 0 10 0 1184.6951 Q8WVX9 Q8WVX9 134 143 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 1.0616E-15 221.33 By MS/MS 6 0 2 2 2412300 2412300 0 11550 2036 12197;12198 29030;29031 20505;20506 20505 1 18811 0 QLILVLCSEENMQK ETLKAENQPIRDVLKQLILVLCSEENMQKA KQLILVLCSEENMQKALELKAKYESDMVTG K Q L Q K A 0 0 1 0 1 2 2 0 0 1 3 1 1 0 0 1 0 0 0 1 0 0 14 0 1703.8586 P42704 P42704 684 697 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 9.6271E-60 303.71 By MS/MS 3.4 0.49 3 2 5 4591300 4591300 0 11551 854 12199;12200 29032;29033;29034;29035;29036 20507;20508;20509;20510;20511;20512 20507 614 1 120290 0 QLIVGVNK QTREHALLAYTLGVKQLIVGVNKMDSTEPP AYTLGVKQLIVGVNKMDSTEPPYSQKRYEE K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 Q5VTE0;P68104;Q05639 Q5VTE0 147 154 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.0032357 148.21 By MS/MS 5.22 2.66 1 1 1 1 1 2 1 1 9 90598000 90598000 0 11552 1184 12201;12202 29037;29038;29039;29040;29041;29042;29043;29044;29045 20513;20514;20515;20516 20513 3 2051600 0 QLKEQQMVMR TWIEVSGSSAKDVAKQLKEQQMVMRGHRET KDVAKQLKEQQMVMRGHRETSMVHELNRYI K Q L M R G 0 1 0 0 0 3 1 0 0 0 1 1 2 0 0 0 0 0 0 1 0 0 10 1 1289.6584 P61619 P61619 393 402 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 3 0.048255 48.602 By MS/MS 1 0 1 1 0 0 0 11553 1103 12203 29046 20517 20517 1 0 0 QLKLDPSIFESLQK ISHVIIGLKTAKGTKQLKLDPSIFESLQKE KQLKLDPSIFESLQKERVEAGDVIYIEANS K Q L Q K E 0 0 0 1 0 2 1 0 0 1 3 2 0 1 1 2 0 0 0 0 0 0 14 1 1644.9087 Q9Y265 Q9Y265 169 182 RUVBL1 RuvB-like 1 yes yes 2;3 7.8693E-18 230.81 By MS/MS 6 0 3 3 9533900 9533900 0 11554 2870 12204;12205 29047;29048;29049 20518;20519;20520 20519 2 74346 0 QLKLDPSIFESLQKER ISHVIIGLKTAKGTKQLKLDPSIFESLQKE LKLDPSIFESLQKERVEAGDVIYIEANSGA K Q L E R V 0 1 0 1 0 2 2 0 0 1 3 2 0 1 1 2 0 0 0 0 0 0 16 2 1930.0524 Q9Y265 Q9Y265 169 184 RUVBL1 RuvB-like 1 yes yes 3 0.00095428 110.04 By MS/MS 6 0 1 1 0 0 0 11555 2870 12206 29050 20521 20521 0 0 0 QLLAGGIAGAVSR DEFTEDEKKSGQWWRQLLAGGIAGAVSRTS WRQLLAGGIAGAVSRTSTAPLDRLKIMMQV R Q L S R T 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1211.6986 Q6NUK1 Q6NUK1 197 209 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 8.5854E-08 188.27 By MS/MS 7.2 0.748 1 2 2 5 16808000 16808000 0 11556 1690 12207;12208 29051;29052;29053;29054;29055 20522;20523 20522 1 307030 0 QLLANDPFFR ECDYRREAACAQNFRQLLANDPFFRVPAVV AQNFRQLLANDPFFRVPAVVKELCTTRVLG R Q L F R V 1 1 1 1 0 1 0 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 10 0 1219.635 Q96D53 Q96D53 299 308 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.00037848 143.7 By MS/MS 6.5 0.5 2 2 4 2596100 2596100 0 11557 2147 12209;12210 29056;29057;29058;29059 20524;20525 20525 1 21847 0 QLLANDPFFRVPAVVK ECDYRREAACAQNFRQLLANDPFFRVPAVV LLANDPFFRVPAVVKELCTTRVLGMELAGG R Q L V K E 2 1 1 1 0 1 0 0 0 0 2 1 0 2 2 0 0 0 0 3 0 0 16 1 1813.025 Q96D53 Q96D53 299 314 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.0087489 121.21 By MS/MS 6 0 1 1 0 0 0 11558 2147 12211 29060 20526 20526 0 0 0 QLLCDLVGISPSSEHDVLK ALPAFRPEANPLTWKQLLCDLVGISPSSEH DLVGISPSSEHDVLKEAVLKKLGGDNTQLE K Q L L K E 0 0 0 2 1 1 1 1 1 1 4 1 0 0 1 3 0 0 0 2 0 0 19 0 2109.0776 Q9UDR5 Q9UDR5 762 780 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.00070212 105.14 By MS/MS 5 1 1 1 2 0 0 0 11559 2762 12212 29061;29062 20527;20528;20529 20529 0 0 0 QLLCGAAIGTHEDDKYR KKNRDYPLASKDAKKQLLCGAAIGTHEDDK LCGAAIGTHEDDKYRLDLLAQAGVDVVVLD K Q L Y R L 2 1 0 2 1 1 1 2 1 1 2 1 0 0 0 0 1 0 1 0 0 0 17 1 1945.9316 P12268 P12268 243 259 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.015301 71.545 By MS/MS 6.5 0.5 1 1 2 3690800 3690800 0 11560 564 12213 29063;29064 20530 20530 1 31585 0 QLLCTNEDVSSPASADQR PTNVFISVESIENSRQLLCTNEDVSSPASA CTNEDVSSPASADQRIQEAWKRSLATVHPD R Q L Q R I 2 1 1 2 1 2 1 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 18 0 1989.9062 Q6P4A7 Q6P4A7 67 84 SFXN4 Sideroflexin-4 yes yes 2 1.7747E-19 249.58 By MS/MS 5.2 3.06 1 1 1 2 5 5522600 5522600 0 11561 1709 12214;12215 29065;29066;29067;29068;29069 20531;20532;20533 20532 2 340780 0 QLLDDEEQLTAK RRVRDEKERSLRAARQLLDDEEQLTAKTLY AARQLLDDEEQLTAKTLYMSHRELPAWVSF R Q L A K T 1 0 0 2 0 2 2 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 12 0 1401.6987 Q9BSJ8 Q9BSJ8 107 118 ESYT1 Extended synaptotagmin-1 yes yes 2 1.615E-56 303.31 By MS/MS 3.8 1.72 1 1 1 1 1 5 15863000 15863000 0 11562 2339 12216 29070;29071;29072;29073;29074 20534;20535;20536 20536 3 339610 0 QLLDEVEVATEPAGSR ELQLPRLPELFETGRQLLDEVEVATEPAGS LLDEVEVATEPAGSRIVQEKVFKGLDLLEK R Q L S R I 2 1 0 1 0 1 3 1 0 0 2 0 0 0 1 1 1 0 0 2 0 0 16 0 1712.8581 P78318 P78318 21 36 IGBP1 Immunoglobulin-binding protein 1 yes yes 2 4.8941E-21 281.32 By MS/MS 7 0 1 1 1090700 1090700 0 11563 1191 12217 29075 20537 20537 1 19491 0 QLLDFSQK ______________________________ LADHAARQLLDFSQKLDINLLDNVVNCLYH R Q L Q K L 0 0 0 1 0 2 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 8 0 977.5182 O14980 O14980 15 22 XPO1 Exportin-1 yes yes 2 0.0090006 122.18 By MS/MS 4 0 1 1 1072700 1072700 0 11564 142 12218 29076 20538 20538 1 29284 0 QLLDLPLDTDLENEK EVFTKIRLVLEVLQKQLLDLPLDTDLENEK QLLDLPLDTDLENEKTSTVPLAEMLGDMIW K Q L E K T 0 0 1 3 0 1 2 0 0 0 5 1 0 0 1 0 1 0 0 0 0 0 15 0 1754.8938 O43264 O43264 306 320 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 6.9367E-15 211.22 By MS/MS 4.5 0.5 1 1 2 4172600 4172600 0 11565 189 12219 29077;29078 20539;20540 20539 2 117210 0 QLLDQVEQIQK IAAKDKLTELQLRARQLLDQVEQIQKEQDY LRARQLLDQVEQIQKEQDYQRYREERFRLT R Q L Q K E 0 0 0 1 0 4 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1340.73 Q7Z7H5 Q7Z7H5 162 172 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 2 0.0048335 108.43 By MS/MS 8.5 0.5 1 1 2 810590 810590 0 11566 1808 12220 29079;29080 20541 20541 1 310330 0 QLLGEHLTAILQK LDQTTQKSLIATVEKQLLGEHLTAILQKGL EKQLLGEHLTAILQKGLNNLLDENRIQDLS K Q L Q K G 1 0 0 0 0 2 1 1 1 1 4 1 0 0 0 0 1 0 0 0 0 0 13 0 1462.8508 Q13620;Q13619 Q13620 447 459 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.0036711 97.163 By MS/MS 4 0 1 1 0 0 0 11567 1390 12221 29081 20542 20542 0 0 0 QLLHLAEEK VVIRGPSSDVEKAKKQLLHLAEEKQTKSFT VEKAKKQLLHLAEEKQTKSFTVDIRAKPEY K Q L E K Q 1 0 0 0 0 1 2 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 1079.5975 Q00341 Q00341 715 723 HDLBP Vigilin yes yes 2 0.0038004 107.15 By MS/MS 3.33 0.471 2 1 3 943460 943460 0 11568 1231 12222;12223 29082;29083;29084 20543;20544 20544 1 24629 0 QLLIGLLK FTQASLGLLANQRKRQLLIGLLKSLRTIKT LANQRKRQLLIGLLKSLRTIKTLQRTDVRL R Q L L K S 0 0 0 0 0 1 0 1 0 1 4 1 0 0 0 0 0 0 0 0 0 0 8 0 896.60589 Q96JG6 Q96JG6 165 172 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 0.042196 94.407 By MS/MS 4 0 1 1 262220 262220 0 11569 2208 12224 29085 20545 20545 1 7158.3 0 QLLLIAGLTR LSINSDFSDLREIKKQLLLIAGLTRERGLL REIKKQLLLIAGLTRERGLLHSSKWSAELA K Q L T R E 1 1 0 0 0 1 0 1 0 1 4 0 0 0 0 0 1 0 0 0 0 0 10 0 1096.6968 Q9UJX2 Q9UJX2 35 44 CDC23 Cell division cycle protein 23 homolog yes yes 2 0.017615 91.584 By MS/MS 6 0 1 1 0 0 0 11570 2802 12225 29086 20546 20546 0 0 0 QLLLQEVENHK DLEQLAKEQDKESEKQLLLQEVENHKKQML ESEKQLLLQEVENHKKQMLSNQASWRKANL K Q L H K K 0 0 1 0 0 2 2 0 1 0 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1349.7303 Q12981 Q12981 75 85 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.017994 84.817 By MS/MS By matching 5.89 2.77 1 1 1 1 1 1 1 1 1 4 5 0 0 0 11571 1321 12226 29087;29088;29089;29090;29091;29092;29093;29094;29095 20547 20547 0 0 0 QLLLSFKPVMQK DSSSAPSKEQLEQEKQLLLSFKPVMQKFLH QEKQLLLSFKPVMQKFLHDHVDLQVSALYA K Q L Q K F 0 0 0 0 0 2 0 0 0 0 3 2 1 1 1 1 0 0 0 1 0 0 12 1 1430.8319 P78344 P78344 807 818 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.009381 97.597 By MS/MS 4 0 1 1 0 0 0 11572 1192 12227 29096 20548 20548 936 0 0 0 QLLLTADDR SIGTENTEENRRFYRQLLLTADDRVNPCIG NRRFYRQLLLTADDRVNPCIGGVILFHETL R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 P04075 P04075 61 69 ALDOA Fructose-bisphosphate aldolase A yes yes 2 0.0007076 148.69 By MS/MS 7.5 0.5 2 2 4 2359800 2359800 0 11573 444 12228;12229 29097;29098;29099;29100 20549;20550;20551 20549 2 69694 0 QLLLTPNAVVIVEDAK PVVKYDRKGYKPRSRQLLLTPNAVVIVEDA LLLTPNAVVIVEDAKVKQRIDYANLTGISV R Q L A K V 2 0 1 1 0 1 1 0 0 1 3 1 0 0 1 0 1 0 0 3 0 0 16 0 1721.9927 O00159 O00159 939 954 MYO1C Unconventional myosin-Ic yes yes 2 1.0611E-14 203.87 By MS/MS 4 0 2 2 2397700 2397700 0 11574 72 12230;12231 29101;29102 20552;20553 20552 1 65454 0 QLLMVGGLDR PGKFYSLPQSPQQFKQLLMVGGLDRYFQVA PQQFKQLLMVGGLDRYFQVARCYRDEGSRP K Q L D R Y 0 1 0 1 0 1 0 2 0 0 3 0 1 0 0 0 0 0 0 1 0 0 10 0 1100.6012 Q6PI48 Q6PI48 248 257 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.00016818 157.96 By MS/MS 6.2 1.17 2 1 1 1 5 2002700 2002700 0 11575 1715 12232;12233 29103;29104;29105;29106;29107 20554;20555 20554 1229 1 75384 0 QLLNAITHPEIR RKVLGDLIFNQPDRRQLLNAITHPEIRKEM DRRQLLNAITHPEIRKEMMKETFKYFLRGY R Q L I R K 1 1 1 0 0 1 1 0 1 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1403.7885 Q8WVC6 Q8WVC6 81 92 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.0018933 108.9 By MS/MS 9 0 1 1 0 0 0 11576 2028 12234 29108 20556 20556 0 0 0 QLLQAALR TRAQQQLAFLEGRKKQLLQAALRAKQKNDV FLEGRKKQLLQAALRAKQKNDVEGAKMHLR K Q L L R A 2 1 0 0 0 2 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 911.55525 Q6P1N0 Q6P1N0 503 510 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.030747 82.671 By MS/MS 3.5 0.5 1 1 2 0 0 0 11577 1702 12235 29109;29110 20557 20557 0 0 0 QLLQANPILEAFGNAK ASSHKSKKDQGELERQLLQANPILEAFGNA LLQANPILEAFGNAKTVKNDNSSRFGKFIR R Q L A K T 3 0 2 0 0 2 1 1 0 1 3 1 0 1 1 0 0 0 0 0 0 0 16 0 1725.9414 Q7Z406;P35579 P35579 210 225 MYH14;MYH9 Myosin-14;Myosin-9 no no 2 0.0055646 86.772 By MS/MS 2 0 1 1 0 0 0 11578 793;1788 12236 29111 20558;20559 20559 0 0 0 QLLQANPILESFGNAK HKGRKDHNIPGELERQLLQANPILESFGNA LLQANPILESFGNAKTVKNDNSSRFGKFIR R Q L A K T 2 0 2 0 0 2 1 1 0 1 3 1 0 1 1 1 0 0 0 0 0 0 16 0 1741.9363 P35580 P35580 217 232 MYH10 Myosin-10 yes yes 2 0.0043022 93.011 By MS/MS 2.5 0.5 1 1 2 0 0 0 11579 794 12237 29112;29113 20560 20560 0 0 0 QLLQEQESVK EELRRLSSEVEALRRQLLQEQESVKQAHLR EALRRQLLQEQESVKQAHLRNEHFQKAIED R Q L V K Q 0 0 0 0 0 3 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1200.635 P15924 P15924 1667 1676 DSP Desmoplakin yes yes 2 0.031567 91.265 By MS/MS 4 1.41 1 1 1 1 1 5 143650 0 143650 11580 603 12238 29114;29115;29116;29117;29118 20561 20561 1 0 271970 QLLQQLVTSYPSTK LQHMHHDAILASSARQLLQQLVTSYPSTKM RQLLQQLVTSYPSTKMVIVSLHTFTLLAAS R Q L T K M 0 0 0 0 0 3 0 0 0 0 3 1 0 0 1 2 2 0 1 1 0 0 14 0 1604.8774 Q9NVH2 Q9NVH2 216 229 INTS7 Integrator complex subunit 7 yes yes 2 0.0027834 100.04 By MS/MS 4 0 1 1 0 0 0 11581 2652 12239 29119 20562 20562 0 0 0 QLLSASYEFQR SVFQVKLGNQNVETKQLLSASYEFQREFTQ VETKQLLSASYEFQREFTQGVKPDWTIARI K Q L Q R E 1 1 0 0 0 2 1 0 0 0 2 0 0 1 0 2 0 0 1 0 0 0 11 0 1340.6725 Q8WWC4 Q8WWC4 259 269 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 3.2007E-16 224.75 By MS/MS 9 0 2 2 3087400 3087400 0 11582 2037 12240;12241 29120;29121 20563;20564 20563 1 1771900 0 QLLSNELLLTQMEK QLVLPNFDMLYNHVKQLLSNELLLTQMEKC KQLLSNELLLTQMEKCALMEALVLISNQFK K Q L E K C 0 0 1 0 0 2 2 0 0 0 5 1 1 0 0 1 1 0 0 0 0 0 14 0 1658.8913 Q9HAV4 Q9HAV4 632 645 XPO5 Exportin-5 yes yes 2 1.4113E-13 213.84 By MS/MS 4.38 1.41 3 2 1 1 1 8 1931900 1931900 0 11583 2546 12242;12243;12244 29122;29123;29124;29125;29126;29127;29128;29129 20565;20566;20567 20565 1537 2 37489 0 QLLTLSSELSQAR EKRITEAEKNERVQRQLLTLSSELSQARDE QRQLLTLSSELSQARDENKRTHNDIIHNEN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 P15311 P15311 530 542 EZR Ezrin yes yes 2 0.0038044 96.745 By MS/MS 5 0 1 1 0 0 0 11584 598 12245 29130 20568 20568 0 0 0 QLMFSQFAQGR TLDIQRQQRMELLDRQLMFSQFAQGRRQRQ LLDRQLMFSQFAQGRRQRQQQGGMINWNRL R Q L G R R 1 1 0 0 0 3 0 1 0 0 1 0 1 2 0 1 0 0 0 0 0 0 11 0 1311.6394 Q8NBM4 Q8NBM4 253 263 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 0.0017965 117.7 By MS/MS 1.5 0.5 2 2 4 434210 434210 0 11585 1942 12246;12247 29131;29132;29133;29134 20569;20570 20569 1300 1 21308 0 QLMSLVAGLR LEHITHSLLGRPLSRQLMSLVAGLRNGALL RPLSRQLMSLVAGLRNGALLLTGGKGSGKS R Q L L R N 1 1 0 0 0 1 0 1 0 0 3 0 1 0 0 1 0 0 0 1 0 0 10 0 1086.6219 O43933 O43933 582 591 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.014214 95.775 By MS/MS 3.5 0.5 1 1 2 0 0 0 11586 235 12248 29135;29136 20571 20571 138 0 0 0 QLNAFDISLR QNYLDILRLLSLGDRQLNAFDISLRFTHLF SLGDRQLNAFDISLRFTHLFWFGDLNYRLD R Q L L R F 1 1 1 1 0 1 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 10 0 1175.6299 O15357 O15357 589 598 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 2 0.037558 70.1 By MS/MS 3 0 1 1 0 0 0 11587 171 12249 29137 20572 20572 0 0 0 QLNNHFGR EVDRDRDLLIQQTMRQLNNHFGRRCATTPM LIQQTMRQLNNHFGRRCATTPMAVHRVKVT R Q L G R R 0 1 2 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 984.48896 O95071 O95071 2258 2265 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.018402 94.006 By MS/MS 1.5 0.5 1 1 2 0 0 0 11588 364 12250 29138;29139 20573;20574 20573 0 0 0 QLNTALPQEFAALTK GKLHEVGHERDSLQRQLNTALPQEFAALTK QLNTALPQEFAALTKELNVCREQLLEREEE R Q L T K E 3 0 1 0 0 2 1 0 0 0 3 1 0 1 1 0 2 0 0 0 0 0 15 0 1643.8883 Q13136 Q13136 81 95 PPFIA1 Liprin-alpha-1 yes yes 2 0.044418 69.261 By MS/MS 3 0 1 1 154710 154710 0 11589 1338 12251 29140 20575 20575 1 4038.7 0 QLNYTIGEVPISFVDR SKGYVFQMEMIVRARQLNYTIGEVPISFVD LNYTIGEVPISFVDRVYGESKLGGNEIVSF R Q L D R V 0 1 1 1 0 1 1 1 0 2 1 0 0 1 1 1 1 0 1 2 0 0 16 0 1849.9574 O60762 O60762 219 234 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 3.4196E-06 151.66 By MS/MS 8 0 1 1 908520 908520 0 11590 263 12252 29141 20576 20576 1 59935 0 QLPQLTSLELQYVSPK QAWDLYYHVFRRISKQLPQLTSLELQYVSP LPQLTSLELQYVSPKLLMCRDLELAVPGTY K Q L P K L 0 0 0 0 0 3 1 0 0 0 4 1 0 0 2 2 1 0 1 1 0 0 16 0 1843.0091 P42345 P42345 2114 2129 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.028334 62.042 By MS/MS 2 0 1 1 0 0 0 11591 849 12253 29142 20577 20577 0 0 0 QLPQVLHMSELLNR LFLQRCLARLRGSDRQLPQVLHMSELLNRG RQLPQVLHMSELLNRGLGVHHSGILPILKE R Q L N R G 0 1 1 0 0 2 1 0 1 0 4 0 1 0 1 1 0 0 0 1 0 0 14 0 1676.9032 Q15477 Q15477 617 630 SKIV2L Helicase SKI2W yes yes 2 0.032664 75.788 By MS/MS 3 0 1 1 0 0 0 11592 1506 12254 29143 20578 20578 1160 0 0 0 QLQAESVSEVVVNR WGHVELLEVLQARVRQLQAESVSEVVVNRV RQLQAESVSEVVVNRVDVARLPECGSGDGS R Q L N R V 1 1 1 0 0 2 2 0 0 0 1 0 0 0 0 2 0 0 0 4 0 0 14 0 1556.8158 O00411 O00411 72 85 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 6.1492E-104 350.4 By MS/MS 3 0 1 1 2212500 2212500 0 11593 92 12255 29144 20579 20579 1 57757 0 QLQAETEPIVK HALREKRTTVVAQLKQLQAETEPIVKMFED AQLKQLQAETEPIVKMFEDPETTRQMQSTR K Q L V K M 1 0 0 0 0 2 2 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 11 0 1254.682 P60228 P60228 83 93 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 1.1246E-06 204.52 By MS/MS By matching 7.38 1.41 3 2 1 1 1 6 2 86312000 85995000 317160 11594 1065 12256;12257 29145;29146;29147;29148;29149;29150;29151;29152 20580;20581;20582 20580 2 1526000 972720 QLQAIEFNK KLTNAEGVEFKLSKKQLQAIEFNKALLAMY FKLSKKQLQAIEFNKALLAMYTNQAEQCRK K Q L N K A 1 0 1 0 0 2 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 9 0 1089.5819 O76094 O76094 302 310 SRP72 Signal recognition particle subunit SRP72 yes yes 2 4.1253E-06 180.87 By MS/MS 5 0 2 2 3670700 3670700 0 11595 346 12258;12259 29153;29154 20583;20584 20583 1 150880 0 QLQAQIDNQNDPEVGQQS EPLISAFREFEELAKQLQAQIDNQNDPEVG AQIDNQNDPEVGQQS_______________ K Q L Q S - 1 0 2 2 0 6 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 18 0 2010.9243 Q96D09 Q96D09 821 838 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 4.2039E-25 217.2 By MS/MS 4 0 1 1 838400 838400 0 11596 2146 12260 29155 20585 20585 1 22887 0 QLQDIATLADQR WYQALTHGLNEEQRKQLQDIATLADQRRAA QRKQLQDIATLADQRRAAHESKMIEKHGGY K Q L Q R R 2 1 0 2 0 3 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 1370.7154 O95373 O95373 991 1002 IPO7 Importin-7 yes yes 2 8.6753E-11 227.37 By MS/MS 3.5 0.5 1 1 2 1398400 1398400 0 11597 388 12261 29156;29157 20586 20586 1 37994 0 QLQEETPPGGPLTEALPPAR QWKKLRRESWEREVKQLQEETPPGGPLTEA TPPGGPLTEALPPARKEGDLPPLWWYIVTR K Q L A R K 2 1 0 0 0 2 3 2 0 0 3 0 0 0 5 0 2 0 0 0 0 0 20 0 2100.0851 Q9Y6M9 Q9Y6M9 139 158 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 2;3 8.4561E-08 141.82 By MS/MS 9 0 2 2 657570 657570 0 11598 3010 12262 29158;29159 20587;20588 20587 2 377380 0 QLQKMVHDIKNNEGGIMNK DKLNKITVPASQKLRQLQKMVHDIKNNEGG MVHDIKNNEGGIMNKIKKLKVKAPPSVPRR R Q L N K I 0 0 3 1 0 2 1 2 1 2 1 3 2 0 0 0 0 0 0 1 0 0 19 2 2196.1143 Q8WV28 Q8WV28 17 35 BLNK B-cell linker protein yes yes 3 0.030768 51.76 By MS/MS By matching 6 2.35 1 2 2 2 1 5 3 0 0 0 11599 2023 12263 29160;29161;29162;29163;29164;29165;29166;29167 20589;20590;20591;20592 20589 1322;1323 0 0 0 QLQNIIQATSR ENLLKASFERMDHLRQLQNIIQATSREIMW DHLRQLQNIIQATSREIMWINDCEEEELLY R Q L S R E 1 1 1 0 0 3 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 11 0 1270.6993 P15924 P15924 271 281 DSP Desmoplakin yes yes 2 9.9316E-05 191.4 By MS/MS By MS/MS 3 1.87 1 1 1 1 3 1 880570 880570 0 11600 603 12264;12265 29168;29169;29170;29171 20593;20594;20595;20596 20595 3 35970 0 QLQNISLAAASGGAK MTVIQWVSDFSERIKQLQNISLAAASGGAK QLQNISLAAASGGAKELKNIHVCLGGLFVP K Q L A K E 4 0 1 0 0 2 0 2 0 1 2 1 0 0 0 2 0 0 0 0 0 0 15 0 1427.7732 Q14204 Q14204 4488 4502 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 3.6434E-16 178.22 By MS/MS 1.8 0.748 2 2 1 5 729640 729640 0 11601 1421 12266;12267 29172;29173;29174;29175;29176 20597;20598;20599;20600 20599 2 27889 0 QLQQAQAAGAEQEVEK GELAKRSERRAEAEKQLQQAQAAGAEQEVE LQQAQAAGAEQEVEKFTKRLVKVTKQHNDE K Q L E K F 4 0 0 0 0 5 3 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 16 0 1726.8486 P39748 P39748 110 125 FEN1 Flap endonuclease 1 yes yes 2 3.2154E-51 288.71 By MS/MS 7.4 1.02 1 2 1 1 5 6228400 6228400 0 11602 826 12268;12269 29177;29178;29179;29180;29181 20601;20602 20601 1 140080 0 QLQQAQAAGAEQEVEKFTK GELAKRSERRAEAEKQLQQAQAAGAEQEVE AQAAGAEQEVEKFTKRLVKVTKQHNDECKH K Q L T K R 4 0 0 0 0 5 3 1 0 0 1 2 0 1 0 0 1 0 0 1 0 0 19 1 2103.0596 P39748 P39748 110 128 FEN1 Flap endonuclease 1 yes yes 2 1.9926E-13 185.32 By MS/MS 6.5 0.5 1 1 2 0 0 0 11603 826 12270 29182;29183 20603 20603 0 0 0 QLQTCFINAAK ELLPSAAENFLVLGRQLQTCFINAAKAEEK VLGRQLQTCFINAAKAEEKDELLHFFQIVT R Q L A K A 2 0 1 0 1 2 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 0 1292.6547 Q15051 Q15051 121 131 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 0.00024669 153.05 By MS/MS 5 0 1 1 1154900 1154900 0 11604 1472 12271 29184 20604 20604 1 47471 0 QLRPACAQALTR AVLHPTAPLYDPEAKQLRPACAQALTRIFR EAKQLRPACAQALTRIFRLSDQDLDQALSD K Q L T R I 3 2 0 0 1 2 0 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 12 1 1383.7405 Q8IXI1 Q8IXI1 180 191 RHOT2 Mitochondrial Rho GTPase 2 yes yes 2 0.052844 115.18 By MS/MS 5 0 1 1 0 0 0 11605 1871 12272 29185 20605 20605 0 0 0 QLSDAISIIGR NIVHLMLSSPEQIQKQLSDAISIIGREDFP QIQKQLSDAISIIGREDFPQKWPDLLTEMV K Q L G R E 1 1 0 1 0 1 0 1 0 3 1 0 0 0 0 2 0 0 0 0 0 0 11 0 1171.6561 P55060 P55060 110 120 CSE1L Exportin-2 yes yes 2 0.0026008 103.08 By MS/MS 3.67 0.471 1 2 3 5835300 5835300 0 11606 1025 12273;12274 29186;29187;29188 20606;20607 20607 1 159300 0 QLSEVFIQLPSR IVDAVIKYKDSSSGRQLSEVFIQLPSRKEL SGRQLSEVFIQLPSRKELPEYYELIRKPVD R Q L S R K 0 1 0 0 0 2 1 0 0 1 2 0 0 1 1 2 0 0 0 1 0 0 12 0 1415.7773 P51532;P51531 P51532 1480 1491 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 0.022785 73.435 By MS/MS 2 0 1 1 0 0 0 11607 965 12275 29189 20608 20608 0 0 0 QLSQSLLPAIVELAEDAK IISNLDCVNEVIGIRQLSQSLLPAIVELAE QSLLPAIVELAEDAKWRVRLAIIEYMPLLA R Q L A K W 3 0 0 1 0 2 2 0 0 1 4 1 0 0 1 2 0 0 0 1 0 0 18 0 1924.0517 P30153;P30154 P30153 399 416 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform no no 2;3 0.0064842 88.282 By MS/MS 6 0 3 3 1614000 1614000 0 11608 737;738 12276;12277 29190;29191;29192 20609;20610;20611 20610 2 12586 0 QLSSCLPNIVPK GSVELLGAMAYCAPKQLSSCLPNIVPKLTE APKQLSSCLPNIVPKLTEVLTDSHVKVQKA K Q L P K L 0 0 1 0 1 1 0 0 0 1 2 1 0 0 2 2 0 0 0 1 0 0 12 0 1354.7279 Q92616 Q92616 1531 1542 GCN1L1 Translational activator GCN1 yes yes 2 0.018265 87.806 By MS/MS 2.5 1.12 1 1 1 1 4 1109600 1109600 0 11609 2068 12278 29193;29194;29195;29196 20612 20612 1 44171 0 QLSSEELEQFQK KRLKGAFKAVMTSIKQLSSEELEQFQKTGT SIKQLSSEELEQFQKTGTIVVEGHELHDED K Q L Q K T 0 0 0 0 0 3 3 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 12 0 1464.7096 P41252 P41252 918 929 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 2.6056E-07 217.02 By MS/MS 3.33 0.471 2 1 3 19899000 19899000 0 11610 840 12279;12280 29197;29198;29199 20613;20614;20615 20615 2 521880 0 QLTAHLQDVNR QETVADYQQTIKKYRQLTAHLQDVNRELTN KKYRQLTAHLQDVNRELTNQQEASVERQQQ R Q L N R E 1 1 1 1 0 2 0 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1293.6789 Q14203 Q14203 522 532 DCTN1 Dynactin subunit 1 yes yes 2 0.0026222 108.43 By MS/MS 3 0 2 2 508400 508400 0 11611 1420 12281;12282 29200;29201 20616;20617 20617 1 13272 0 QLTAQQHAILVDLGR NKQQPPDISYKELLKQLTAQQHAILVDLGR QLTAQQHAILVDLGRTFPTHPYFSVQLGPG K Q L G R T 2 1 0 1 0 3 0 1 1 1 3 0 0 0 0 0 1 0 0 1 0 0 15 0 1661.9213 O60343 O60343 958 972 TBC1D4 TBC1 domain family member 4 yes yes 2 2.9465E-06 150.22 By MS/MS 3 0 1 1 0 0 0 11612 246 12283 29202 20618 20618 0 0 0 QLTFEEIAK LCLMEMTFTRPANHRQLTFEEIAKSAKITV RPANHRQLTFEEIAKSAKITVNEVELLVMK R Q L A K S 1 0 0 0 0 1 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 9 0 1077.5706 Q9UNM6 Q9UNM6 290 298 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.00045178 140.75 By MS/MS By matching 7 0 3 2 1 23043000 23007000 36037 11613 2845 12284;12285 29203;29204;29205 20619;20620 20620 1 411150 147940 QLTGGVDVER QSQEEQRREMLETVKQLTGGVDVERNSTEA LETVKQLTGGVDVERNSTEAERNKTRESAK K Q L E R N 0 1 0 1 0 1 1 2 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1072.5513 O43432 O43432 1179 1188 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.030839 84.817 By MS/MS By matching 2 0 2 1 1 613250 591400 21848 11614 200 12286 29206;29207 20621 20621 1 29396 18394 QLTLLESDLYR ETFDLMTLHPIEIARQLTLLESDLYRKVQP EIARQLTLLESDLYRKVQPSELVGSVWTKE R Q L Y R K 0 1 0 1 0 1 1 0 0 0 4 0 0 0 0 1 1 0 1 0 0 0 11 0 1349.7191 Q07890;Q07889 Q07890 785 795 SOS2;SOS1 Son of sevenless homolog 2;Son of sevenless homolog 1 yes no 2 0.0013545 128.91 By MS/MS 3 0 1 1 359240 359240 0 11615 1285 12287 29208 20622 20622 1 9377.9 0 QLTLSCPLCVNPVCR DLVHSHIQSNELCSKQLTLSCPLCVNPVCR QLTLSCPLCVNPVCRETKSFFTSQQL____ K Q L C R E 0 1 1 0 3 1 0 0 0 0 3 0 0 0 2 1 1 0 0 2 0 0 15 0 1815.8794 P22830 P22830 398 412 FECH Ferrochelatase, mitochondrial yes yes 2 0.0037316 96.103 By MS/MS 7 0 1 1 0 0 0 11616 663 12288 29209 20623 20623 0 0 0 QLTNPYGSWR EDVPKDVLEYVVFEKQLTNPYGSWRMHTKI VVFEKQLTNPYGSWRMHTKIVPPWAPPKQP K Q L W R M 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 1 1 1 1 0 0 0 10 0 1220.5938 Q9BRJ2 Q9BRJ2 251 260 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 0.008407 92.538 By MS/MS 8 0 1 1 0 0 0 11617 2322 12289 29210 20624 20624 0 0 0 QLTPPEGSSK ILHTYYKFDYKAHQRQLTPPEGSSKSEQDQ KAHQRQLTPPEGSSKSEQDQAENEGEDSAV R Q L S K S 0 0 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 0 0 0 10 0 1042.5295 Q99613;B5ME19 Q99613 522 531 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.006195 103.55 By MS/MS By matching 4.33 0.471 2 1 2 1 6217700 6056600 161040 11618 2275 12290 29211;29212;29213 20625 20625 1 176770 336500 QLTVLSDQQK SNIIGFCYDYLHILKQLTVLSDQQKANVEA LHILKQLTVLSDQQKANVEAIMLAVMKKLT K Q L Q K A 0 0 0 1 0 3 0 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1158.6245 O43592 O43592 360 369 XPOT Exportin-T yes yes 2 0.0019183 117.53 By MS/MS 4 0 1 1 1745800 1745800 0 11619 208 12291 29214 20626 20626 1 47658 0 QLVAEQVTYQR SFRRDNNELLLFILKQLVAEQVTYQRNRFG FILKQLVAEQVTYQRNRFGAQQDTIEVPEK K Q L Q R N 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 11 0 1333.699 P49736 P49736 838 848 MCM2 DNA replication licensing factor MCM2 yes yes 2 2.3202E-38 280.96 By MS/MS 5 1.73 2 2 1 1 1 1 8 9932200 9932200 0 11620 928 12292;12293 29215;29216;29217;29218;29219;29220;29221;29222 20627;20628;20629 20628 2 272410 0 QLVAIYEVLKDDERR HPDKNKDENAETQFRQLVAIYEVLKDDERR QLVAIYEVLKDDERRQRYDDILINGLPDWR R Q L R R Q 1 2 0 2 0 1 2 0 0 1 2 1 0 0 0 0 0 0 1 2 0 0 15 2 1845.9949 Q96KC8 Q96KC8 108 122 DNAJC1 DnaJ homolog subfamily C member 1 yes yes 3 0.045427 49.188 By MS/MS 6 0 1 1 0 0 0 11621 2219 12294 29223 20630 20630 0 0 0 QLVDYEEK AWLDKIDRRYAWIKRQLVDYEEKYGRMFPR RYAWIKRQLVDYEEKYGRMFPREWCMAERI R Q L E K Y 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 8 0 1022.492 Q5VIR6 Q5VIR6 294 301 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0075842 127.46 By MS/MS 4.5 0.5 1 1 2 618350 618350 0 11622 1645 12295 29224;29225 20631 20631 1 18854 0 QLVEETQEQVR LRELQAKQQRILHWRQLVEETQEQVRLLIK LHWRQLVEETQEQVRLLIKGNSASKTRLCR R Q L V R L 0 1 0 0 0 3 3 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1357.6838 O94927 O94927 391 401 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 5.6532E-22 251.64 By MS/MS 5 0 1 1 1049000 1049000 0 11623 360 12296 29226 20632;20633 20632 2 43117 0 QLVEQVEQIQK IAAKDKLSELQLRVRQLVEQVEQIQKEQNY LRVRQLVEQVEQIQKEQNYQRWREERFRQT R Q L Q K E 0 0 0 0 0 4 2 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1340.73 Q9BVK6 Q9BVK6 170 180 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2 8.8554E-49 289.67 By MS/MS 9 0 1 1 3298400 3298400 0 11624 2379 12297 29227 20634 20634 1 1893000 0 QLVEQVEQIQKEQNYQR IAAKDKLSELQLRVRQLVEQVEQIQKEQNY VEQVEQIQKEQNYQRWREERFRQTSESTNQ R Q L Q R W 0 1 1 0 0 6 3 0 0 1 1 1 0 0 0 0 0 0 1 2 0 0 17 1 2159.0971 Q9BVK6 Q9BVK6 170 186 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 2;3 2.5348E-06 195.72 By MS/MS 9 0 2 2 2097000 2097000 0 11625 2379 12298;12299 29228;29229 20635;20636 20636 1 1203500 0 QLVLIDYGDQYTAR LEDLFIGNKVNVFSRQLVLIDYGDQYTARQ RQLVLIDYGDQYTARQLGSRKEKTLALIKP R Q L A R Q 1 1 0 2 0 2 0 1 0 1 2 0 0 0 0 0 1 0 2 1 0 0 14 0 1653.8362 Q9Y5B8 Q9Y5B8 72 85 NME7 Nucleoside diphosphate kinase 7 yes yes 2 2.7034E-08 176.32 By MS/MS 7 0 1 1 0 0 0 11626 2967 12300 29230 20637 20637 1 0 0 QLVQDENVR PTVLLGALPLRSLTRQLVQDENVRGVITMN LRSLTRQLVQDENVRGVITMNEEYETRFLC R Q L V R G 0 1 1 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 1099.5622 Q8WUK0 Q8WUK0 58 66 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.0017959 120.87 By MS/MS 9.33 0.471 2 1 3 4344700 4344700 0 11627 2017 12301;12302 29231;29232;29233 20638;20639 20638 1 2545300 0 QLVSDEDKAQLASK WWDEHLSEENVPFIKQLVSDEDKAQLASKL KQLVSDEDKAQLASKLCPLKDEPWPIHPWE K Q L S K L 2 0 0 2 0 2 1 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 14 1 1530.789 P09001 P09001 63 76 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2 4.423E-07 190.35 By MS/MS 8 0 2 2 937070 937070 0 11628 510 12303;12304 29234;29235 20640;20641 20641 1 61818 0 QLVSEEDNTSAPSLFK RSTAGDPTVPGSLFRQLVSEEDNTSAPSLF LVSEEDNTSAPSLFKLGWLSSMTK______ R Q L F K L 1 0 1 1 0 1 2 0 0 0 2 1 0 1 1 3 1 0 0 1 0 0 16 0 1763.8578 Q8WTW3 Q8WTW3 956 971 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 2 9.6938E-21 217.68 By MS/MS 4.33 0.471 2 1 3 1338300 1338300 0 11629 2010 12305;12306 29236;29237;29238 20642;20643 20642 1 37859 0 QLVTNACLIK DVAIKEPLVDVVDPKQLVTNACLIKEVDIY VVDPKQLVTNACLIKEVDIYTVKVEDLTFT K Q L I K E 1 0 1 0 1 1 0 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1158.6431 Q99873 Q99873 244 253 PRMT1 Protein arginine N-methyltransferase 1 yes yes 2 0.00044336 147.19 By MS/MS 5.33 3.09 1 1 1 3 3252900 3252900 0 11630 2296 12307 29239;29240;29241 20644;20645 20645 2 98301 0 QLWDSPETAPAAR AGAMPNEAGGHPDARQLWDSPETAPAARTP ARQLWDSPETAPAARTPQSPAPCVLLRAQR R Q L A R T 3 1 0 1 0 1 1 0 0 0 1 0 0 0 2 1 1 1 0 0 0 0 13 0 1440.6997 Q9Y613 Q9Y613 482 494 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 8.3564E-12 204.56 By MS/MS 3 0 1 1 661810 661810 0 11631 2993 12308 29242 20646 20646 1 17277 0 QLYETTDTTTR ADHVQSLAQLENLCKQLYETTDTTTRLQAE NLCKQLYETTDTTTRLQAEKALVEFTNSPD K Q L T R L 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 5 0 1 0 0 0 11 0 1327.6256 Q9UIA9 Q9UIA9 17 27 XPO7 Exportin-7 yes yes 2 0.0030823 115.78 By MS/MS 4 0 1 1 1135100 1135100 0 11632 2790 12309 29243 20647 20647 1 30986 0 QLYFTCTAFGASR QLTSKCPFLIPFETRQLYFTCTAFGASRAI TRQLYFTCTAFGASRAIVWLQNRREATVER R Q L S R A 2 1 0 0 1 1 0 1 0 0 1 0 0 2 0 1 2 0 1 0 0 0 13 0 1520.7082 Q9ULT8 Q9ULT8 2081 2093 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0015424 110.93 By MS/MS 2 0 1 1 0 0 0 11633 2826 12310 29244 20648 20648 0 0 0 QLYNIYAK TDIAIQAEEIMKLKKQLYNIYAKHTKQSLQ EIMKLKKQLYNIYAKHTKQSLQVIESAMER K Q L A K H 1 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 8 0 1011.5389 Q16740 Q16740 204 211 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 2 0.018281 108.98 By MS/MS 8.5 0.5 1 1 2 2904100 2904100 0 11634 1545 12311 29245;29246 20649 20649 1 243080 0 QMFGNADMNTFPTFK SEYQQELERELFKLKQMFGNADMNTFPTFK QMFGNADMNTFPTFKFEDPKFEVIEKPQA_ K Q M F K F 1 0 2 1 0 1 0 1 0 0 0 1 2 3 1 0 2 0 0 0 0 0 15 0 1747.7698 P18859 P18859 80 94 ATP5J ATP synthase-coupling factor 6, mitochondrial yes yes 2 0.0020395 96.604 By MS/MS 10 0 1 1 325640 325640 0 11635 627 12312 29247 20650 20650 417;418 1 346120 0 QMFLTQTDTGDDR KDVDFMYVELIQRCKQMFLTQTDTGDDRVY CKQMFLTQTDTGDDRVYQMPSFLQSVASVL K Q M D R V 0 1 0 3 0 2 0 1 0 0 1 0 1 1 0 0 3 0 0 0 0 0 13 0 1526.6671 P78527 P78527 394 406 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 6.5106E-46 277.15 By MS/MS 1.5 0.5 1 1 2 1220900 1220900 0 11636 1197 12313 29248;29249 20651;20652 20651 2 60105 0 QMLLFTHIR IMESLTKMYSIPKDKQMLLFTHIRLAHGFS SIPKDKQMLLFTHIRLAHGFSNHRKRLQAV K Q M I R L 0 1 0 0 0 1 0 0 1 1 2 0 1 1 0 0 1 0 0 0 0 0 9 0 1157.6379 Q7Z6Z7 Q7Z6Z7 254 262 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0076182 108.98 By MS/MS 1 0 1 1 0 0 0 11637 1803 12314 29250 20653 20653 1266 0 0 0 QMNPFIEDILNR RTAYLFSRFVKSLNKQMNPFIEDILNRIQD LNKQMNPFIEDILNRIQDLLELSPPENGHQ K Q M N R I 0 1 2 1 0 1 1 0 0 2 1 0 1 1 1 0 0 0 0 0 0 0 12 0 1488.7395 O43592 O43592 558 569 XPOT Exportin-T yes yes 2 0.027908 77.288 By MS/MS 4 0 1 1 235600 235600 0 11638 208 12315 29251 20654 20654 123 1 6431.6 0 QMQVLHPAAR KGDVTITNDGATILKQMQVLHPAARMLVEL ATILKQMQVLHPAARMLVELSKAQDIEAGD K Q M A R M 2 1 0 0 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 10 0 1149.6077 P50991 P50991 80 89 CCT4 T-complex protein 1 subunit delta yes yes 2;3 0.0032246 113.26 By MS/MS 6.17 0.373 5 1 6 11361000 11361000 0 11639 956 12316;12317;12318;12319 29252;29253;29254;29255;29256;29257 20655;20656;20657;20658;20659 20656 718 2 88595 0 QMSGAQIK GCIIGRQGANINEIRQMSGAQIKIANPVEG ANINEIRQMSGAQIKIANPVEGSSGRQVTI R Q M I K I 1 0 0 0 0 2 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 8 0 861.43784 P57721;Q15365;Q15366 Q15365 307 314 PCBP3;PCBP1;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 2 0.0081812 117.16 By MS/MS 7.5 0.5 1 1 2 1528000 1528000 0 11640 1490;1491;1055 12320 29258;29259 20660 20660 822 1 42826 0 QMSLLLR LIIYDDLSKQAVAYRQMSLLLRRPPGREAY SKQAVAYRQMSLLLRRPPGREAYPGDVFYL R Q M L R R 0 1 0 0 0 1 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 0 7 0 859.49496 P25705 P25705 323 329 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.044114 105.2 By MS/MS By matching 6.75 0.829 2 1 1 3 1 18909000 18884000 25246 11641 687 12321 29260;29261;29262;29263 20661 20661 1 156240 77426 QMSVPGIFNPHEIPEEMCD REIALRQADEEKHKRQMSVPGIFNPHEIPE PGIFNPHEIPEEMCD_______________ R Q M C D - 0 0 1 1 1 1 3 1 1 2 0 0 2 1 3 1 0 0 0 1 0 0 19 0 2228.9541 O14980 O14980 1053 1071 XPO1 Exportin-1 yes yes 2 1.2697E-07 147.73 By MS/MS 4 0 1 1 208190 208190 0 11642 142 12322 29264 20662 20662 90 1 5683.5 0 QMTDPNVALTFLEK VNPLSLVEIILHVVRQMTDPNVALTFLEKT RQMTDPNVALTFLEKTREKVKSSDEAVILC R Q M E K T 1 0 1 1 0 1 1 0 0 0 2 1 1 1 1 0 2 0 0 1 0 0 14 0 1605.8072 Q9UNM6 Q9UNM6 86 99 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 7.3676E-09 198.14 By MS/MS 6.8 0.4 1 4 5 6695700 6695700 0 11643 2845 12323;12324;12325;12326 29265;29266;29267;29268;29269 20663;20664;20665;20666 20665 1636 2 117990 0 QMTDVLLTPATDALK ELDDKSISDMWTMVKQMTDVLLTPATDALK QMTDVLLTPATDALKNRSSVEVRMEFVRQA K Q M L K N 2 0 0 2 0 1 0 0 0 0 3 1 1 0 1 0 3 0 0 1 0 0 15 0 1615.8491 Q8N1F7 Q8N1F7 229 243 NUP93 Nuclear pore complex protein Nup93 yes yes 2 0.015826 72.705 By MS/MS 5 0 1 1 0 0 0 11644 1898 12327 29270 20667 20667 0 0 0 QMVEHGGFYR DMDKYGTQRVISFIRQMVEHGGFYRTSDQT ISFIRQMVEHGGFYRTSDQTWVKLERIQFV R Q M Y R T 0 1 0 0 0 1 1 2 1 0 0 0 1 1 0 0 0 0 1 1 0 0 10 0 1222.5553 Q14204 Q14204 2685 2694 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0025947 103.88 By MS/MS 1 0 1 1 0 0 0 11645 1421 12328 29271 20668 20668 0 0 0 QMVIDVLHPGK IRTRKFMTNRLLQRKQMVIDVLHPGKATVP LQRKQMVIDVLHPGKATVPKTEIREKLAKM K Q M G K A 0 0 0 1 0 1 0 1 1 1 1 1 1 0 1 0 0 0 0 2 0 0 11 0 1235.6696 P62847 P62847 22 32 RPS24 40S ribosomal protein S24 yes yes 2;3 0.0013125 115.78 By MS/MS 9.5 0.5 3 3 6 914780 914780 0 11646 1149 12329;12330;12331 29272;29273;29274;29275;29276;29277 20669;20670;20671;20672;20673;20674 20673 898 2 732050 0 QNFEIGNNFAR TIRSHASASLYLLMRQNFEIGNNFARVKMQ LLMRQNFEIGNNFARVKMQVTMSLSSLVGT R Q N A R V 1 1 3 0 0 1 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1308.6211 Q96N67 Q96N67 1582 1592 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.0541E-05 169.65 By MS/MS 2 0.707 1 2 1 4 1118900 1118900 0 11647 2230 12332;12333 29278;29279;29280;29281 20675;20676 20676 1 55555 0 QNGIQTNKPALR RTQEFLSACKSLQTRQNGIQTNKPALRAVR QTRQNGIQTNKPALRAVRQRSEFTLMAKRI R Q N L R A 1 1 2 0 0 2 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 12 1 1338.7368 Q13190 Q13190 75 86 STX5 Syntaxin-5 yes yes 2 0.0018495 99.815 By MS/MS 7.33 0.471 2 1 3 0 0 0 11648 1346 12334 29282;29283;29284 20677;20678;20679 20679 0 0 0 QNGYLEFDALSR IYSRTQSTWVDSFFRQNGYLEFDALSRLGI FFRQNGYLEFDALSRLGIPDAVSYIKKRYK R Q N S R L 1 1 1 1 0 1 1 1 0 0 2 0 0 1 0 1 0 0 1 0 0 0 12 0 1411.6732 O94874 O94874 263 274 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.0023632 103.43 By MS/MS 5 0 1 1 0 0 0 11649 354 12335 29285 20680 20680 0 0 0 QNIGVATFIGLDK DSIDIAQECVNFLKRQNIGVATFIGLDKMA KRQNIGVATFIGLDKMAVWAKKMTEIQTPE R Q N D K M 1 0 1 1 0 1 0 2 0 2 1 1 0 1 0 0 1 0 0 1 0 0 13 0 1374.7507 Q9NTJ3 Q9NTJ3 661 673 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0040325 108.7 By MS/MS 3.5 0.5 1 1 2 274550 274550 0 11650 2630 12336 29286;29287 20681 20681 1 7263.5 0 QNINLSAPIMSR ANPISGHYDRSKSLKQNINLSAPIMSRFDL SLKQNINLSAPIMSRFDLFFILVDECNEVT K Q N S R F 1 1 2 0 0 1 0 0 0 2 1 0 1 0 1 2 0 0 0 0 0 0 12 0 1342.7027 Q14566 Q14566 518 529 MCM6 DNA replication licensing factor MCM6 yes yes 2 5.0071E-06 175.33 By MS/MS 4.5 0.5 1 1 2 1990600 1990600 0 11651 1436 12337 29288;29289 20682 20682 1129 1 56195 0 QNIVLWR PSSVNEKKRREREERQNIVLWRQPLITLQY KRREREERQNIVLWRQPLITLQYFSLEILV R Q N W R Q 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 7 0 927.52904 Q96GC9 Q96GC9 42 48 VMP1 Vacuole membrane protein 1 yes yes 2 0.020051 126.24 By MS/MS 7 0 1 1 910260 910260 0 11652 2180 12338 29290 20683 20683 1 16266 0 QNKLEQVEK IEGRYATALYSAASKQNKLEQVEKELLRVA YSAASKQNKLEQVEKELLRVAQILKEPKVA K Q N E K E 0 0 1 0 0 2 2 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1114.5982 P48047 P48047 52 60 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 4.7458E-07 207.29 By MS/MS By matching 9 0 3 2 1 0 0 0 11653 900 12339 29291;29292;29293 20684;20685 20685 0 0 0 QNKLEQVEKELLR IEGRYATALYSAASKQNKLEQVEKELLRVA SKQNKLEQVEKELLRVAQILKEPKVAASVL K Q N L R V 0 1 1 0 0 2 3 0 0 0 3 2 0 0 0 0 0 0 0 1 0 0 13 2 1625.9101 P48047 P48047 52 64 ATP5O ATP synthase subunit O, mitochondrial yes yes 3 0.00092045 101.2 By MS/MS 9 0 1 1 0 0 0 11654 900 12340 29294 20686 20686 0 0 0 QNLDALLNQLK MKEQPWVSVQPRKLRQNLDALLNQLKSFPA RKLRQNLDALLNQLKSFPARLRQYASYEFV R Q N L K S 1 0 2 1 0 2 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 11 0 1268.7089 Q14204 Q14204 1361 1371 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0018003 122.94 By MS/MS 1.5 0.5 2 2 4 140120 140120 0 11655 1421 12341;12342 29295;29296;29297;29298 20687;20688;20689;20690;20691;20692;20693 20687 2 6883.3 0 QNLFLGSLTSR QEEQQRLAELSKSNKQNLFLGSLTSRLWPR KSNKQNLFLGSLTSRLWPRSKQP_______ K Q N S R L 0 1 1 0 0 1 0 1 0 0 3 0 0 1 0 2 1 0 0 0 0 0 11 0 1234.667 Q3ZCQ8 Q3ZCQ8 335 345 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.0019001 121.6 By MS/MS 8.5 1.12 2 2 2 2 8 17667000 17667000 0 11656 1573 12343;12344 29299;29300;29301;29302;29303;29304;29305;29306 20694;20695;20696;20697;20698;20699;20700 20695 4 926200 0 QNLFYLETLNTK AFGQSFLQPDIHLFKQNLFYLETLNTKQKL LFKQNLFYLETLNTKQKLYHKKIFRTAMLF K Q N T K Q 0 0 2 0 0 1 1 0 0 0 3 1 0 1 0 0 2 0 1 0 0 0 12 0 1482.7718 Q96QU8 Q96QU8 998 1009 XPO6 Exportin-6 yes yes 2 0.0003266 146.71 By MS/MS 3.67 0.471 1 2 3 371320 371320 0 11657 2243 12345;12346 29307;29308;29309 20701;20702 20701 1 10024 0 QNLLDDLVTR AVSTHQITQLEGDRRQNLLDDLVTRERLLL EGDRRQNLLDDLVTRERLLLASFKNEGAEP R Q N T R E 0 1 1 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 10 0 1185.6354 Q9UNK0 Q9UNK0 80 89 STX8 Syntaxin-8 yes yes 2 0.00075985 133.99 By MS/MS 8.5 0.5 1 1 2 712690 712690 0 11658 2843 12347 29310;29311 20703 20703 1 267820 0 QNLLSVGDYR LKMKPGRPRIKKDEKQNLLSVGDYRHRRTE KKDEKQNLLSVGDYRHRRTEQEEDEELLTE K Q N Y R H 0 1 1 1 0 1 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 10 0 1163.5935 O60264 O60264 133 142 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.00075985 133.99 By MS/MS 3 0 1 1 1771200 1771200 0 11659 240 12348 29312 20704;20705 20705 2 46237 0 QNLQEEKER EEEVQQQKLAEERRRQNLQEEKERKLECLP AEERRRQNLQEEKERKLECLPPEPSPDDPE R Q N E R K 0 1 1 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1172.5786 Q96CS3 Q96CS3 337 345 FAF2 FAS-associated factor 2 yes yes 2;3 0.0041018 160.82 By MS/MS By matching 6.14 0.35 6 1 5 2 21630000 21604000 26001 11660 2140 12349;12350 29313;29314;29315;29316;29317;29318;29319 20706;20707;20708;20709 20706 2 168470 79745 QNLRLTGPAAAEPRCAADAGMK SGSAAAALDADCRLKQNLRLTGPAAAEPRC PAAAEPRCAADAGMKRALGRRKGVWLRLRK K Q N M K R 6 2 1 1 1 1 1 2 0 0 2 1 1 0 2 0 1 0 0 0 0 0 22 2 2297.1369 Q8N2K0 Q8N2K0 38 59 ABHD12 Monoacylglycerol lipase ABHD12 yes yes 3 0.052957 44.743 By MS/MS 1 0 1 1 0 0 0 11661 1906 12351 29320 20710 20710 0 0 0 QNLSKEELIAELQDCEGLIVR CRKILQDGGLQVVEKQNLSKEELIAELQDC ELIAELQDCEGLIVRSATKVTADVINAAEK K Q N V R S 1 1 1 1 1 2 4 1 0 2 4 1 0 0 0 1 0 0 0 1 0 0 21 1 2456.2581 O43175 O43175 34 54 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 0.015824 60.032 By MS/MS 6 0 1 1 3254000 3254000 0 11662 185 12352 29321 20711 20711 1 25375 0 QNLTRDCHPR EHSERQPLNRNSLRRQNLTRDCHPRQVKHN NSLRRQNLTRDCHPRQVKHNGWVVHQPCPR R Q N P R Q 0 2 1 1 1 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 10 1 1295.6153 Q96A56 Q96A56 212 221 TP53INP1 Tumor protein p53-inducible nuclear protein 1 yes yes 2 0.0052753 136.11 By MS/MS 4.5 0.5 1 1 2 6940300 6940300 0 11663 2117 12353 29322;29323 20712 20712 1 282340 0 QNMPPRQLLEDIK QLNDLKKLVDSLKTKQNMPPRQLLEDIKVV TKQNMPPRQLLEDIKVVLCRSEEFQFLNPT K Q N I K V 0 1 1 1 0 2 1 0 0 1 2 1 1 0 2 0 0 0 0 0 0 0 13 1 1580.8345 Q9BZY9 Q9BZY9 239 251 TRIM31 E3 ubiquitin-protein ligase TRIM31 yes yes 2 0.024406 80.916 By MS/MS 5 0 1 1 0 0 0 11664 2429 12354 29324 20713 20713 1496 0 0 0 QNQHEELQNVR LEGGKQFLEKRLQVKQNQHEELQNVRKHIH LQVKQNQHEELQNVRKHIHNCFSNLGCFLL K Q N V R K 0 1 2 0 0 3 2 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1393.6698 Q8NHH9 Q8NHH9 271 281 ATL2 Atlastin-2 yes yes 3 0.047949 66.56 By MS/MS 6.5 0.5 1 1 2 3318800 3318800 0 11665 1975 12355 29325;29326 20714 20714 1 27721 0 QNRVPVNEVVIR KLNYTYLISILKDMKQNRVPVNEVVIRQLE DMKQNRVPVNEVVIRQLEFAAQYPPTFDRY K Q N I R Q 0 2 2 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 4 0 0 12 1 1421.8103 O75127 O75127 615 626 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 3 0.0077657 89.189 By MS/MS 5 0 1 1 850860 850860 0 11666 280 12356 29327 20715 20715 1 34974 0 QNTDEHAR RNILDDFREAYFWLRQNTDEHARVMSWWDY EAYFWLRQNTDEHARVMSWWDYGYQIAGMA R Q N A R V 1 1 1 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 8 0 969.42642 Q8TCJ2 Q8TCJ2 593 600 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.013442 98.582 By MS/MS 1.5 0.5 1 1 2 0 0 0 11667 1995 12357 29328;29329 20716 20716 0 0 0 QNTFLVLR LGQEVTLCGWIQYRRQNTFLVLRDFDGLVQ GWIQYRRQNTFLVLRDFDGLVQVIIPQDES R Q N L R D 0 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 8 0 989.56581 Q6PI48 Q6PI48 77 84 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.002028 157.21 By MS/MS 6 1.41 1 1 1 1 1 5 6556900 6556900 0 11668 1715 12358 29330;29331;29332;29333;29334 20717 20717 1 246870 0 QNVPIIR GDQSPYVTSVILHIKQNVPIIRDNLASTRK TSVILHIKQNVPIIRDNLASTRKYFTQFCV K Q N I R D 0 1 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 7 0 838.50249 Q5VIR6 Q5VIR6 647 653 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.046884 103.29 By MS/MS 4.5 0.5 1 1 2 764190 764190 0 11669 1645 12359 29335;29336 20718 20718 1 22074 0 QPAEHLQLLEEAAK DLASFDEDLADYLYKQPAEHLQLLEEAAKE KQPAEHLQLLEEAAKEVADEVTRPRPSGEE K Q P A K E 3 0 0 0 0 2 3 0 1 0 3 1 0 0 1 0 0 0 0 0 0 0 14 0 1575.8257 P33992 P33992 91 104 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.00088704 133.71 By MS/MS 4.5 0.5 1 1 2 0 0 0 11670 774 12360 29337;29338 20719 20719 0 0 0 QPAIISQLDPVNER GLRAAMEALVVEVTKQPAIISQLDPVNERM KQPAIISQLDPVNERMLNMIRQISRPSAAG K Q P E R M 1 1 1 1 0 2 1 0 0 2 1 0 0 0 2 1 0 0 0 1 0 0 14 0 1578.8366 Q08211 Q08211 1117 1130 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00010753 166.7 By MS/MS 2.25 0.829 1 1 2 4 1465900 1465900 0 11671 1287 12361;12362 29339;29340;29341;29342 20720;20721 20720 1 42006 0 QPALDVLYDVMK NALKRANEFLEVGKKQPALDVLYDVMKSKK GKKQPALDVLYDVMKSKKHRTWQKIHEPIM K Q P M K S 1 0 0 2 0 1 0 0 0 0 2 1 1 0 1 0 0 0 1 2 0 0 12 0 1390.7166 Q14152 Q14152 25 36 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0036114 111.94 By MS/MS 3.25 0.829 1 1 2 4 344540 344540 0 11672 1409 12363;12364 29343;29344;29345;29346 20722;20723;20724 20722 1092 1 9405.5 0 QPAPTTIGGLNK TSTSKAKTQPTSLPKQPAPTTIGGLNKKPM LPKQPAPTTIGGLNKKPMSLASGLVPAAPP K Q P N K K 1 0 1 0 0 1 0 2 0 1 1 1 0 0 2 0 2 0 0 0 0 0 12 0 1195.6561 P27816 P27816 727 738 MAP4 Microtubule-associated protein 4 yes yes 2 0.019096 86.882 By MS/MS 2.5 0.5 1 1 2 323360 323360 0 11673 710 12365 29347;29348 20725 20725 1 11406 0 QPDLEHALK EPVFFCTIEPPSLSKQPDLEHALKCLQRED PPSLSKQPDLEHALKCLQREDPSLKVRLDP K Q P L K C 1 0 0 1 0 1 1 0 1 0 2 1 0 0 1 0 0 0 0 0 0 0 9 0 1049.5506 Q969S9 Q969S9 502 510 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.037673 66.962 By MS/MS 5 0 1 1 0 0 0 11674 2107 12366 29349 20726 20726 0 0 0 QPDSGISSIR GAVLKGPFSRYDYQRQPDSGISSIRSFKTI YDYQRQPDSGISSIRSFKTILPAAAQDVYY R Q P I R S 0 1 0 1 0 1 0 1 0 2 0 0 0 0 1 3 0 0 0 0 0 0 10 0 1058.5356 P04843 P04843 269 278 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0030416 98.04 By MS/MS 5 0 1 1 0 0 0 11675 458 12367 29350 20727 20727 0 0 0 QPEAVHLLDK YKDIWHKVGNALWRRQPEAVHLLDKILKKH ALWRRQPEAVHLLDKILKKHKPDFISLFKN R Q P D K I 1 0 0 1 0 1 1 0 1 0 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1148.619 Q92621 Q92621 32 41 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.018146 91.549 By MS/MS 2 0 1 1 0 0 0 11676 2070 12368 29351 20728 20728 0 0 0 QPGNETADTVLK IPEAVFVEDVDSFMKQPGNETADTVLKKLD FMKQPGNETADTVLKKLDEQYQKYKFMELN K Q P L K K 1 0 1 1 0 1 1 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 12 0 1271.6357 P61758 P61758 40 51 VBP1 Prefoldin subunit 3 yes yes 2 2.5518E-05 163.84 By MS/MS 9 0 2 2 1466200 1466200 0 11677 1105 12369;12370 29352;29353 20729;20730;20731 20731 1 841450 0 QPGRFDEVLIR KEPAYVRCIKPNDAKQPGRFDEVLIRHQVK NDAKQPGRFDEVLIRHQVKYLGLLENLRVR K Q P I R H 0 2 0 1 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 11 1 1328.7201 O00159 O00159 633 643 MYO1C Unconventional myosin-Ic yes yes 2 0.019753 131.12 By MS/MS 4 0 1 1 0 0 0 11678 72 12371 29354 20732 20732 0 0 0 QPLLLSEDEEDTKR GEELVTKPVGGNYGKQPLLLSEDEEDTKRV KQPLLLSEDEEDTKRVVRSAKDKRFEELTN K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 Q99613;B5ME19 Q99613 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 1.7597E-05 173.04 By MS/MS 4 0 2 2 1204500 1204500 0 11679 2275 12372;12373 29355;29356 20733;20734 20733 1 32882 0 QPNPPLILQR ANTGHTIHVHYPGNRQPNPPLILQRLLGPS YPGNRQPNPPLILQRLLGPSAAADILQLSS R Q P Q R L 0 1 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 0 10 0 1174.6822 Q7Z6Z7 Q7Z6Z7 2570 2579 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0094544 85.676 By MS/MS 1 0 1 1 0 0 0 11680 1803 12374 29357 20735 20735 0 0 0 QPPSQFEPLDMK LRLAQHITYVHQHSRQPPSQFEPLDMKLMR HSRQPPSQFEPLDMKLMRRYIAMCREKQPM R Q P M K L 0 0 0 1 0 2 1 0 0 0 1 1 1 1 3 1 0 0 0 0 0 0 12 0 1415.6755 P33993 P33993 546 557 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.03351 74.841 By MS/MS 5.5 0.5 1 1 2 1758400 1758400 0 11681 775 12375 29358;29359 20736 20736 1 56743 0 QPQGHLLLIGVSGAGK NEVLDHVLRIDRIFRQPQGHLLLIGVSGAG PQGHLLLIGVSGAGKTTLSRFVAWMNGLSV R Q P G K T 1 0 0 0 0 2 0 4 1 1 3 1 0 0 1 1 0 0 0 1 0 0 16 0 1573.894 Q14204 Q14204 2928 2943 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 5.5448E-05 134.98 By MS/MS 1.5 0.5 1 1 2 0 0 0 11682 1421 12376 29360;29361 20737;20738 20737 0 0 0 QPQPSPAEGR LKQQGVLALRPYLQKQPQPSPAEGRAVTNE PYLQKQPQPSPAEGRAVTNEPEEEELATLS K Q P G R A 1 1 0 0 0 2 1 1 0 0 0 0 0 0 3 1 0 0 0 0 0 0 10 0 1065.5203 P56192 P56192 205 214 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.015835 93.598 By MS/MS By matching 4.57 1.4 2 2 1 1 1 6 1 3664000 3655700 8290.8 11683 1042 12377;12378 29362;29363;29364;29365;29366;29367;29368 20739;20740 20740 1 98726 11882 QPQVAELLAEAR ______________________________ ALRQPQVAELLAEARRAFREEFGAEPELAV R Q P A R R 3 1 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 12 0 1323.7147 P51570 P51570 6 17 GALK1 Galactokinase yes yes 2 0.0011782 117.23 By MS/MS 7.33 0.471 2 1 3 2628000 2628000 0 11684 967 12379;12380 29369;29370;29371 20741;20742 20742 1 49888 0 QPQVAELLAEARR ______________________________ LRQPQVAELLAEARRAFREEFGAEPELAVS R Q P R R A 3 2 0 0 0 2 2 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 13 1 1479.8158 P51570 P51570 6 18 GALK1 Galactokinase yes yes 2 0.025873 93.258 By MS/MS 6.5 0.5 1 1 2 0 0 0 11685 967 12381 29372;29373 20743 20743 0 0 0 QPSADVLVATPGALWK EGGHGMRRIRLQLSRQPSADVLVATPGALW PSADVLVATPGALWKALKSRLISLEQLSFL R Q P W K A 3 0 0 1 0 1 0 1 0 0 2 1 0 0 2 1 1 1 0 2 0 0 16 0 1651.8934 Q9NUL7 Q9NUL7 253 268 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 1.4323E-07 166.7 By MS/MS 6 0 2 2 2502100 2502100 0 11686 2638 12382;12383 29374;29375 20744;20745 20744 1 19511 0 QPTHQGGPAQDR KKERMSKHAQTFGAKQPTHQGGPAQDRGVY GAKQPTHQGGPAQDRGVYLSLLASLRTRAQ K Q P D R G 1 1 0 1 0 3 0 2 1 0 0 0 0 0 2 0 1 0 0 0 0 0 12 0 1290.6065 Q15477 Q15477 540 551 SKIV2L Helicase SKI2W yes yes 2 0.038207 80.737 By MS/MS 3.5 0.5 1 1 2 0 0 0 11687 1506 12384 29376;29377 20746 20746 0 0 0 QPTIFQNKK ______________________________ ERAYQKQPTIFQNKKRVLLGETGKEKLPRY K Q P K K R 0 0 1 0 0 2 0 0 0 1 0 2 0 1 1 0 1 0 0 0 0 0 9 1 1102.6135 P62280 P62280 13 21 RPS11 40S ribosomal protein S11 yes yes 2 0.046553 69.628 By MS/MS 9 0 1 1 0 0 0 11688 1127 12385 29378 20747 20747 0 0 0 QPTLQAAELIDSEFR EDLDYTPTSASFVNKQPTLQAAELIDSEFR QPTLQAAELIDSEFRAGMSNRQKNKAKRMA K Q P F R A 2 1 0 1 0 2 2 0 0 1 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1716.8683 O14981 O14981 187 201 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.017549 78.814 By MS/MS 2 0 1 1 0 0 0 11689 143 12386 29379 20748;20749 20749 0 0 0 QPVLSQTEAR GAYLAQPLLREVLEKQPVLSQTEARDLVER EVLEKQPVLSQTEARDLVERCMRVLYYRDA K Q P A R D 1 1 0 0 0 2 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 0 1127.5935 P28070 P28070 202 211 PSMB4 Proteasome subunit beta type-4 yes yes 2 4.9209E-05 163.88 By MS/MS By matching 9.25 0.433 3 1 3 1 5483400 5438800 44602 11690 713 12387;12388 29380;29381;29382;29383 20750;20751 20751 1 3146300 480680 QPVYVVDVSK FGPIPLGSLGWKTVKQPVYVVDVSKGIVNA WKTVKQPVYVVDVSKGIVNAVKDPDANGKS K Q P S K G 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 1 4 0 0 10 0 1132.6128 Q16795 Q16795 238 247 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.040756 68.355 By MS/MS 8 0 1 1 0 0 0 11691 1548 12389 29384 20752 20752 0 0 0 QQAELEAFENR KEAEAKAALEEEKRRQQAELEAFENRLKGR EKRRQQAELEAFENRLKGRRKKNRKRDEVA R Q Q N R L 2 1 1 0 0 2 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 11 0 1333.6262 Q6ZNB6 Q6ZNB6 853 863 NFXL1 NF-X1-type zinc finger protein NFXL1 yes yes 2 0.0025233 139.38 By MS/MS 1 0 1 1 0 0 0 11692 1740 12390 29385 20753 20753 1 0 0 QQDINDTVR LKRVLYCCPEIFTMRQQDINDTVRLLKEKC EIFTMRQQDINDTVRLLKEKCLFTVQQVTK R Q Q V R L 0 1 1 2 0 2 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 9 0 1087.5258 Q7Z6M4 Q7Z6M4 191 199 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 0.039237 85.862 By MS/MS 7.5 0.5 1 1 2 1162000 1162000 0 11693 1802 12391 29386;29387 20754 20754 1 32952 0 QQDVFMFLTNR HSKLDPDMAFCANIRQQDVFMFLTNRHTLG ANIRQQDVFMFLTNRHTLGHLLSLDSYRTT R Q Q N R H 0 1 1 1 0 2 0 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 11 0 1397.6762 Q02809 Q02809 489 499 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.011949 94.409 By MS/MS 5 0 3 3 332410 332410 0 11694 1256 12392;12393;12394 29388;29389;29390 20755;20756;20757 20755 1017 2 13663 0 QQEALEEQAALEPK QSQLLALKKELMVQKQQEALEEQAALEPKL KQQEALEEQAALEPKLDLLLEKTKELQKLI K Q Q P K L 3 0 0 0 0 3 4 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 14 0 1582.7839 Q96JB5 Q96JB5 458 471 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 1.4126E-25 237.53 By MS/MS 5 0 2 2 2142800 2142800 0 11695 2206 12395;12396 29391;29392 20758;20759 20758 1 88077 0 QQEELDALKK ADLLQTKLQQSSYHKQQEELDALKKTIEES SSYHKQQEELDALKKTIEESEETLKNTKEI K Q Q K K T 1 0 0 1 0 2 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1200.635 O95347 O95347 741 750 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00062757 151.22 By MS/MS 3 0 1 1 0 0 0 11696 385 12397 29393 20760 20760 0 0 0 QQEFADTLLPDSEAFQGK NTQDTVRFVHVYSNRQQEFADTLLPDSEAF FADTLLPDSEAFQGKSAVSILERRNTAGRV R Q Q G K S 2 0 0 2 0 3 2 1 0 0 2 1 0 2 1 1 1 0 0 0 0 0 18 0 2022.9535 Q9Y2G8 Q9Y2G8 427 444 DNAJC16 DnaJ homolog subfamily C member 16 yes yes 2 5.0059E-14 185.32 By MS/MS 4.5 0.5 1 1 2 711100 711100 0 11697 2885 12398 29394;29395 20761 20761 1 27396 0 QQEGGSQASVYTSATEGR PRTSASSVSLLSVLRQQEGGSQASVYTSAT GGSQASVYTSATEGRGFPASGLATESDGGN R Q Q G R G 2 1 0 0 0 3 2 3 0 0 0 0 0 0 0 3 2 0 1 1 0 0 18 0 1854.8344 Q9C0C7 Q9C0C7 453 470 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes yes 2 1.6088E-10 158.52 By MS/MS 3 0 1 1 505720 505720 0 11698 2434 12399 29396 20762 20762 1 13202 0 QQEILGVLVPR SFVSQVLGKACVHGRQQEILGVLVPRLAAL VHGRQQEILGVLVPRLAALTQGSYLHQRVC R Q Q P R L 0 1 0 0 0 2 1 1 0 1 2 0 0 0 1 0 0 0 0 2 0 0 11 0 1250.7347 Q9Y4R8 Q9Y4R8 227 237 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0017692 123.35 By MS/MS 5.17 1.07 2 2 1 1 6 2517200 2517200 0 11699 2958 12400;12401 29397;29398;29399;29400;29401;29402 20763;20764;20765 20763 1 67168 0 QQEQQVPILEK GVHISGLHTESAPRRQQEQQVPILEKFCFT APRRQQEQQVPILEKFCFTPHTEEGCLSER R Q Q E K F 0 0 0 0 0 4 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 11 0 1338.7143 P49327 P49327 1106 1116 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.6126E-29 255.39 By MS/MS 2.5 1.12 1 1 1 1 4 7866600 7866600 0 11700 915 12402 29403;29404;29405;29406 20766;20767;20768 20767 3 328890 0 QQEVVVAGSSLPTSSK LYQVQLAQQQAALQKQQEVVVAGSSLPTSS QEVVVAGSSLPTSSKVNATVPSNMMSVNGQ K Q Q S K V 1 0 0 0 0 2 1 1 0 0 1 1 0 0 1 4 1 0 0 3 0 0 16 0 1615.8417 Q9H3P7 Q9H3P7 307 322 ACBD3 Golgi resident protein GCP60 yes yes 2 6.6483E-21 222.56 By MS/MS 5.5 0.5 1 1 2 2747300 2747300 0 11701 2491 12403 29407;29408 20769 20769 1 88700 0 QQFEETVR FQTKFPAELENRIDRQQFEETVRTLNNLYA LENRIDRQQFEETVRTLNNLYAEAEKLGGQ R Q Q V R T 0 1 0 0 0 2 2 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 1035.4985 Q7Z5G4 Q7Z5G4 41 48 GOLGA7 Golgin subfamily A member 7 yes yes 2 0.012661 116.25 By MS/MS 10 0 1 1 861860 861860 0 11702 1799 12404 29409 20770 20770 1 916070 0 QQGLVDGLFLLR FHGRISREESHRIIKQQGLVDGLFLLRDSQ IIKQQGLVDGLFLLRDSQSNPKAFVLTLCH K Q Q L R D 0 1 0 1 0 2 0 2 0 0 4 0 0 1 0 0 0 0 0 1 0 0 12 0 1357.7718 Q13322 Q13322 509 520 GRB10 Growth factor receptor-bound protein 10 yes yes 2 0.0021543 105.86 By MS/MS 6 0 1 1 0 0 0 11703 1355 12405 29410 20771;20772 20772 0 0 0 QQGPPTPFDFLGR LGRAPSPRPGPGPLRQQGPPTPFDFLGRAG LRQQGPPTPFDFLGRAGSPRGSPLAEGPQA R Q Q G R A 0 1 0 1 0 2 0 2 0 0 1 0 0 2 3 0 1 0 0 0 0 0 13 0 1458.7256 Q8WUF5 Q8WUF5 168 180 PPP1R13L RelA-associated inhibitor yes yes 2 0.011649 79.974 By MS/MS 4 0 1 1 0 0 0 11704 2016 12406 29411 20773 20773 0 0 0 QQGVLALRPYLQK STQEPCQRAAETVLKQQGVLALRPYLQKQP LKQQGVLALRPYLQKQPQPSPAEGRAVTNE K Q Q Q K Q 1 1 0 0 0 3 0 1 0 0 3 1 0 0 1 0 0 0 1 1 0 0 13 1 1512.8776 P56192 P56192 192 204 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0094278 154.01 By MS/MS 4.5 0.5 1 1 2 0 0 0 11705 1042 12407 29412;29413 20774 20774 0 0 0 QQHVIETLIGK ALGIDCLHKGTNDMKQQHVIETLIGKKQQI NDMKQQHVIETLIGKKQQISLATQMVRMIL K Q Q G K K 0 0 0 0 0 2 1 1 1 2 1 1 0 0 0 0 1 0 0 1 0 0 11 0 1264.7139 P48643 P48643 503 513 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 1.0449E-05 173.24 By MS/MS By matching 6.6 0.917 1 4 3 2 9 1 78802000 78792000 9526.2 11706 909 12408;12409 29414;29415;29416;29417;29418;29419;29420;29421;29422;29423 20775;20776;20777;20778 20777 2 667630 29216 QQHVIETLIGKK ALGIDCLHKGTNDMKQQHVIETLIGKKQQI DMKQQHVIETLIGKKQQISLATQMVRMILK K Q Q K K Q 0 0 0 0 0 2 1 1 1 2 1 2 0 0 0 0 1 0 0 1 0 0 12 1 1392.8089 P48643 P48643 503 514 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3;4 1.9146E-05 168.85 By MS/MS 6 0 3 3 4486900 4486900 0 11707 909 12410;12411 29424;29425;29426 20779;20780;20781 20780 1 34989 0 QQIAEIEK DIILGMEISAPSQQRQQIAEIEKQTKEQSQ SAPSQQRQQIAEIEKQTKEQSQLTATQTRT R Q Q E K Q 1 0 0 0 0 2 2 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 8 0 957.51311 Q6P2Q9 Q6P2Q9 2024 2031 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.027331 110.41 By MS/MS 1.5 0.5 1 1 2 1357800 1357800 0 11708 1706 12412 29427;29428 20782 20782 1 67325 0 QQIAEIEKQTK DIILGMEISAPSQQRQQIAEIEKQTKEQSQ SQQRQQIAEIEKQTKEQSQLTATQTRTVNK R Q Q T K E 1 0 0 0 0 3 2 0 0 2 0 2 0 0 0 0 1 0 0 0 0 0 11 1 1314.7143 Q6P2Q9 Q6P2Q9 2024 2034 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.005279 150.15 By MS/MS 2 0 1 1 0 0 0 11709 1706 12413 29429 20783 20783 0 0 0 QQICNQQPPCSR FFMPEICKSYKGEGRQQICNQQPPCSRLHI EGRQQICNQQPPCSRLHICDHFTRGNCRFP R Q Q S R L 0 1 1 0 2 4 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1514.6718 Q7Z2W4 Q7Z2W4 159 170 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 2.9537E-09 195.51 By MS/MS 4.5 0.5 1 1 2 1124300 1124300 0 11710 1777 12414 29430;29431 20784 20784 1 32811 0 QQIESEVANLKK VSRANQHKEQQLGLKQQIESEVANLKKTIK GLKQQIESEVANLKKTIKVTTAAAAAATSQ K Q Q K K T 1 0 1 0 0 2 2 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 12 1 1385.7514 Q9UBW8 Q9UBW8 207 218 COPS7A COP9 signalosome complex subunit 7a yes yes 2 0.0085501 95.483 By MS/MS 8 0 1 1 0 0 0 11711 2760 12415 29432 20785 20785 0 0 0 QQIQSIQQSIER VIACSVTIKEGSQLKQQIQSIQQSIERLLV QLKQQIQSIQQSIERLLV____________ K Q Q E R L 0 1 0 0 0 5 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 0 12 0 1456.7634 P55769 P55769 114 125 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 2 5.7201E-12 211.63 By MS/MS 10 0 2 2 1300900 1300900 0 11712 1034 12416;12417 29433;29434 20786;20787 20787 1 1382700 0 QQISLATQMVR DMKQQHVIETLIGKKQQISLATQMVRMILK IGKKQQISLATQMVRMILKIDDIRKPGESE K Q Q V R M 1 1 0 0 0 3 0 0 0 1 1 0 1 0 0 1 1 0 0 1 0 0 11 0 1273.6813 P48643 P48643 515 525 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.00015205 148.56 By MS/MS By MS/MS 6.71 1.39 5 1 1 5 2 56513000 56330000 182830 11713 909 12418;12419;12420;12421 29435;29436;29437;29438;29439;29440;29441 20788;20789;20790;20791;20792 20792 647 3 445260 560730 QQKPTLSGQR ______________________________ MNNQKQQKPTLSGQRFKTRKRDEKERFDPT K Q Q Q R F 0 1 0 0 0 3 0 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 10 1 1141.6204 Q7L1Q6 Q7L1Q6 6 15 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 2 0.01446 128.86 By MS/MS 7 0 1 1 0 0 0 11714 1762 12422 29442 20793 20793 0 0 0 QQLEEKLKK LKLTQESVADAAQDKQQLEEKLKKKDSELS DAAQDKQQLEEKLKKKDSELSQLSLRVEDE K Q Q K K K 0 0 0 0 0 2 2 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 9 2 1142.6659 A7E2Y1 A7E2Y1 1123 1131 MYH7B Myosin-7B yes yes 3 0.0078114 97.965 By MS/MS 3 0 1 1 733120 733120 0 11715 25 12423 29443 20794 20794 1 19138 0 QQLGIEKEAVLLNLK AFVNSCYIKSEEAKRQQLGIEKEAVLLNLK QQLGIEKEAVLLNLKSNQELSEQGTSFSQT R Q Q L K S 1 0 1 0 0 2 2 1 0 1 4 2 0 0 0 0 0 0 0 1 0 0 15 1 1694.9931 Q9H9J2 Q9H9J2 106 120 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 6.6417E-13 196.02 By MS/MS 8 0 1 1 0 0 0 11716 2535 12424 29444 20795 20795 0 0 0 QQLLIGAYAK LSKYLRDYSRTIPGKQQLLIGAYAKALEII TIPGKQQLLIGAYAKALEIIPRQLCDNAGF K Q Q A K A 2 0 0 0 0 2 0 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 10 0 1103.6339 Q99832 Q99832 431 440 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0039623 105.14 By MS/MS 5.64 2.74 1 1 1 1 3 1 1 1 1 11 142910000 142910000 0 11717 2295 12425;12426 29445;29446;29447;29448;29449;29450;29451;29452;29453;29454;29455 20796;20797;20798;20799 20799 3 1723800 0 QQLTGHSK DHVLLTLQKPSPELKQQLTGHSKRVAGSVT KPSPELKQQLTGHSKRVAGSVTELIQAAEA K Q Q S K R 0 0 0 0 0 2 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 8 0 897.46683 Q9Y490 Q9Y490 2267 2274 TLN1 Talin-1 yes yes 2 0.048331 74.173 By MS/MS 2 0 1 1 0 0 0 11718 2947 12427 29456 20800 20800 0 0 0 QQLTNTEVR WRIQRMLAITANTLRQQLTNTEVRRLEKNV TANTLRQQLTNTEVRRLEKNVKEVLEDFAE R Q Q V R R 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 9 0 1087.5622 O60313 O60313 896 904 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0020363 129.42 By MS/MS 4.5 0.5 1 1 2 2053900 2053900 0 11719 244 12428 29457;29458 20801 20801 1 67007 0 QQLVASHLEK KLTPVLLAKQLAALKQQLVASHLEKLLGPD LAALKQQLVASHLEKLLGPDAAINLTDPDG K Q Q E K L 1 0 0 0 0 2 1 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1151.6299 Q13561 Q13561 147 156 DCTN2 Dynactin subunit 2 yes yes 2 0.020444 92.051 By MS/MS 6 0 1 1 2662700 2662700 0 11720 1382 12429 29459 20802 20802 1 20764 0 QQPDTELEIQQK VLLPQTSFPMKLLGRQQPDTELEIQQKCGF LGRQQPDTELEIQQKCGFSELYSWQRERKV R Q Q Q K C 0 0 0 1 0 4 2 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 12 0 1455.7205 Q9NSE4 Q9NSE4 79 90 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0016085 126.39 By MS/MS By matching 6.67 2.43 2 1 1 1 1 5 1 9392400 9322800 69622 11721 2624 12430 29460;29461;29462;29463;29464;29465 20803;20804 20803 2 581880 145480 QQPLFVSGGDDYK FDEHDGPVRGIDFHKQQPLFVSGGDDYKIK HKQQPLFVSGGDDYKIKVWNYKLRRCLFTL K Q Q Y K I 0 0 0 2 0 2 0 2 0 0 1 1 0 1 1 1 0 0 1 1 0 0 13 0 1452.6885 P53621 P53621 62 74 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.001284 127.87 By MS/MS 2 0.816 1 1 1 3 2133700 2133700 0 11722 1005 12431 29466;29467;29468 20805;20806 20805 2 71203 0 QQPLFVSGGDDYKIK FDEHDGPVRGIDFHKQQPLFVSGGDDYKIK QQPLFVSGGDDYKIKVWNYKLRRCLFTLLG K Q Q I K V 0 0 0 2 0 2 0 2 0 1 1 2 0 1 1 1 0 0 1 1 0 0 15 1 1693.8675 P53621 P53621 62 76 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 3 0.043401 58.817 By MS/MS 3 0 1 1 1192100 1192100 0 11723 1005 12432 29469 20807 20807 1 31120 0 QQQDEAYLASLRADQEKER ERLEREERNQTQVLRQQQDEAYLASLRADQ EAYLASLRADQEKERKKREERERKRRKEEE R Q Q E R K 3 2 0 2 0 4 3 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 19 2 2277.0986 Q96CS3 Q96CS3 291 309 FAF2 FAS-associated factor 2 yes yes 3 0.00023332 112.91 By MS/MS 7 0.816 1 1 1 3 0 0 0 11724 2140 12433 29470;29471;29472 20808 20808 0 0 0 QQQDQVDR YEYAMRWKALIEMEKQQQDQVDRNIKEARE ALIEMEKQQQDQVDRNIKEAREKLEMEMEA K Q Q D R N 0 1 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 1015.4683 Q15233 Q15233 280 287 NONO Non-POU domain-containing octamer-binding protein yes yes 2 0.0043405 139.97 By MS/MS 6 0 1 1 1772600 1772600 0 11725 1487 12434 29473 20809 20809 1 13823 0 QQQELDGSLKK LAQSQHAQEQEFVQKQQQELDGSLKKIIQQ FVQKQQQELDGSLKKIIQQQKAELANIERE K Q Q K K I 0 0 0 1 0 3 1 1 0 0 2 2 0 0 0 1 0 0 0 0 0 0 11 1 1272.6674 Q9H2G2 Q9H2G2 967 977 SLK STE20-like serine/threonine-protein kinase yes yes 2;3 0.00012788 156.16 By MS/MS 2.33 0.471 2 1 3 648610 648610 0 11726 2476 12435;12436 29474;29475;29476 20810;20811 20811 1 30072 0 QQQFENLDQQLR MTIKMNESDAWFEEKQQQFENLDQQLRKLH EEKQQQFENLDQQLRKLHVSVEALVCHRKE K Q Q L R K 0 1 1 1 0 5 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 12 0 1545.7536 O60749 O60749 310 321 SNX2 Sorting nexin-2 yes yes 2 3.461E-07 185.33 By MS/MS 5 0 1 1 1149200 1149200 0 11727 262 12437 29477 20812 20812 1 47237 0 QQQLEEMRKR EAERRARLQDEERRRQQQLEEMRKREAEDR EERRRQQQLEEMRKREAEDRARQEEERRRQ R Q Q K R E 0 2 0 0 0 3 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 10 2 1344.6932 P55196 P55196 1613 1622 MLLT4 Afadin yes yes 3 0.032977 72.848 By MS/MS 3 0 1 1 0 0 0 11728 1029 12438 29478 20813 20813 0 0 0 QQQLLNEENLR YQDKLARQRYEDQLKQQQLLNEENLRKQEE DQLKQQQLLNEENLRKQEESVQKQEAMRRA K Q Q L R K 0 1 2 0 0 3 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1383.7106 Q5T9A4;Q9NVI7 Q9NVI7 195 205 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 5.1196E-05 195.79 By MS/MS By MS/MS 5.6 0.49 2 3 4 1 23848000 23777000 70501 11729 2655;1634 12439;12440 29479;29480;29481;29482;29483 20814;20815;20816;20817;20818 20815 3 487950 216220 QQQPPPETFDFK VNRELTNQQEASVERQQQPPPETFDFKIKF VERQQQPPPETFDFKIKFAETKAHAKAIEM R Q Q F K I 0 0 0 1 0 3 1 0 0 0 0 1 0 2 3 0 1 0 0 0 0 0 12 0 1460.6936 Q14203 Q14203 545 556 DCTN1 Dynactin subunit 1 yes yes 2 0.0010082 133.23 By MS/MS 3 0 1 1 910630 910630 0 11730 1420 12441 29484 20819 20819 1 23772 0 QQQQIEAQQQLLATK RMDLTLAELQEMASRQQQQIEAQQQLLATK QQQQIEAQQQLLATKEQRLKFLKQQDQRQQ R Q Q T K E 2 0 0 0 0 7 1 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 15 0 1753.9323 Q13625 Q13625 138 152 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 7.7611E-05 174.46 By MS/MS 3 0 1 1 939940 939940 0 11731 1391 12442 29485 20820 20820 1 24537 0 QQQQQQNDVVK ITELVLRAKKDNLAKQQQQQQNDVVKLTKN NLAKQQQQQQNDVVKLTKNSKRKKRCC___ K Q Q V K L 0 0 1 1 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 11 0 1341.6637 Q15286 Q15286 179 189 RAB35 Ras-related protein Rab-35 yes yes 2 0.00020231 154.85 By MS/MS 9 0 1 1 164390 164390 0 11732 1488 12443 29486 20821 20821 1 94346 0 QQQQQQQEQLYK QEFKYQKSLPPRFQRQQQQQQQEQLYKMQH FQRQQQQQQQEQLYKMQHWQPVYPPPSHPQ R Q Q Y K M 0 0 0 0 0 8 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 12 0 1575.7641 Q5JSZ5 Q5JSZ5 631 642 PRRC2B Protein PRRC2B yes yes 2 0.00023257 160.75 By MS/MS 3 0.816 1 1 1 3 408540 408540 0 11733 1608 12444 29487;29488;29489 20822 20822 1 15343 0 QQQQSGAWGAPR RRPDTLQLWQERERRQQQQSGAWGAPRKDS ERRQQQQSGAWGAPRKDSLLKPGLRAVVGG R Q Q P R K 2 1 0 0 0 4 0 2 0 0 0 0 0 0 1 1 0 1 0 0 0 0 12 0 1312.6272 O75427 O75427 418 429 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.0052268 105.2 By MS/MS 5 0 1 1 393710 393710 0 11734 308 12445 29490 20823 20823 1 16183 0 QQQVDIPLR QPRQGSPVAAGAPAKQQQVDIPLRLLVPTQ AGAPAKQQQVDIPLRLLVPTQYVGAIIGKE K Q Q L R L 0 1 0 1 0 3 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 9 0 1095.6037 Q9NZI8 Q9NZI8 191 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.026411 93.111 By MS/MS 5 0 1 1 4909700 4909700 0 11735 2711 12446 29491 20824 20824 1 201810 0 QQSEEDLLLQDFSR ______________________________ KQQSEEDLLLQDFSRNLSAKSSALFFGNAF K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 Q9UNL2 Q9UNL2 9 22 SSR3 Translocon-associated protein subunit gamma yes yes 2;3 4.0479E-08 187.62 By MS/MS By MS/MS 6 3.56 2 2 2 1 6 2 14 1 11359000 11158000 201340 11736 2844 12447;12448 29492;29493;29494;29495;29496;29497;29498;29499;29500;29501;29502;29503;29504;29505;29506 20825;20826;20827;20828;20829;20830;20831;20832;20833;20834;20835;20836;20837;20838 20834 10 6171500 2169900 QQSEISAAVER QQVADEDEIWKQRRRQQSEISAAVERARKR QRRRQQSEISAAVERARKRREEEERRMEEQ R Q Q E R A 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1216.6048 Q9Y520 Q9Y520 451 461 PRRC2C Protein PRRC2C yes yes 2 0.047511 77.379 By MS/MS 2 0.816 1 1 1 3 992030 992030 0 11737 2963 12449 29507;29508;29509 20839 20839 1 46164 0 QQSIAGSADSKPIDVSR AKEKIEKKGEKKEKKQQSIAGSADSKPIDV SIAGSADSKPIDVSRLDLRIGCIITARKHP K Q Q S R L 2 1 0 2 0 2 0 1 0 2 0 1 0 0 1 4 0 0 0 1 0 0 17 1 1757.8908 Q12904 Q12904 138 154 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 2 1.4799E-09 171.11 By MS/MS 7.5 0.5 1 1 2 0 0 0 11738 1313 12450 29510;29511 20840 20840 0 0 0 QQTQPGFILLR LREGRLAVLMEAQCRQQTQPGFILLRETLL AQCRQQTQPGFILLRETLLGKVVALPDHLG R Q Q L R E 0 1 0 0 0 3 0 1 0 1 2 0 0 1 1 0 1 0 0 0 0 0 11 0 1299.7299 Q9Y4R8 Q9Y4R8 143 153 TELO2 Telomere length regulation protein TEL2 homolog yes yes 2 0.0013586 135.55 By MS/MS 4 0 2 2 2444000 2444000 0 11739 2958 12451;12452 29512;29513 20841;20842 20842 1 66719 0 QQTSLFIAR EDVLAVMDNKNPTIKQQTSLFIARSFRHCT KNPTIKQQTSLFIARSFRHCTASTLPKSLL K Q Q A R S 1 1 0 0 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 9 0 1062.5822 Q14008 Q14008 414 422 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.002709 122.18 By MS/MS 2 0 1 1 1560400 1560400 0 11740 1405 12453 29514 20843 20843 1 77560 0 QQVASLIGADPR HAYGWESEAAMERARQQVASLIGADPREII RARQQVASLIGADPREIIFTSGATESNNIA R Q Q P R E 2 1 0 1 0 2 0 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 12 0 1253.6728 Q9Y697 Q9Y697 108 119 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 6.563E-06 175.49 By MS/MS 6.6 1.02 1 1 2 1 5 5944700 5944700 0 11741 2998 12454;12455 29515;29516;29517;29518;29519 20844;20845 20844 1 116800 0 QQVEALYR CRLFQTAITRAKEKRQQVEALYRLQGQKEP TRAKEKRQQVEALYRLQGQKEPGDQGPAHP R Q Q Y R L 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 1005.5243 Q9Y399 Q9Y399 265 272 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0090006 122.18 By MS/MS By matching 8 0 2 1 1 11064000 10994000 69901 11742 2920 12456 29520;29521 20846 20846 1 725260 596340 QQVPSGESAILDR VCSTNDLKELLIFNKQQVPSGESAILDRVA NKQQVPSGESAILDRVADGMVFGALLPCEE K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 3.3392E-05 158.06 By MS/MS 3.67 0.471 1 2 3 17851000 17851000 0 11743 521 12457;12458 29522;29523;29524 20847;20848;20849 20849 2 486530 0 QQYIEQSQAEIYHNR IGWVYGGIPAFIHAKQQYIEQSQAEIYHNR QQYIEQSQAEIYHNRFDAVQSAHRAATRGF K Q Q N R F 1 1 1 0 0 4 2 0 1 2 0 0 0 0 0 1 0 0 2 0 0 0 15 0 1905.8969 Q9NPL8 Q9NPL8 102 116 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 1.6151E-07 188.48 By MS/MS 8 0 1 1 0 0 0 11744 2583 12459 29525 20850 20850 0 0 0 QQYLQSIEER IEPYLKKKDESQEGKQQYLQSIEEREKLDG SQEGKQQYLQSIEEREKLDGLYECILCACC K Q Q E R E 0 1 0 0 0 3 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1292.6361 P21912 P21912 168 177 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.00031879 152.06 By MS/MS 8 0 1 1 6249200 6249200 0 11745 651 12460 29526 20851 20851 1 412260 0 QRELEIEER QERVKKLEEVERKKRQRELEIEERERRREE VERKKRQRELEIEERERRREEERRLGDSSL R Q R E R E 0 2 0 0 0 1 4 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1200.6099 Q14152 Q14152 860 868 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 5.1919E-07 196.88 By MS/MS By matching 3.33 0.471 4 2 5 1 5248100 5202300 45805 11746 1409 12461;12462 29527;29528;29529;29530;29531;29532 20852;20853;20854 20853 2 136070 65647 QRELEIEERER QERVKKLEEVERKKRQRELEIEERERRREE RKKRQRELEIEERERRREEERRLGDSSLSR R Q R E R R 0 3 0 0 0 1 5 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 11 2 1485.7536 Q14152 Q14152 860 870 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3;4 0.0023305 119.53 By MS/MS By matching 3.5 0.707 5 2 1 7 1 9016600 9016600 0 11747 1409 12463;12464 29533;29534;29535;29536;29537;29538;29539;29540 20855;20856;20857;20858 20857 2 236360 0 QRESDITK VQVVITDPEKLDQIRQRESDITKERIQKIL EKLDQIRQRESDITKERIQKILATGANVIL R Q R T K E 0 1 0 1 0 1 1 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 8 1 975.49852 P17987 P17987 265 272 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.0079812 171.53 By MS/MS 3 2.16 1 1 1 3 8493500 8493500 0 11748 619 12465 29541;29542;29543 20859;20860 20860 2 72787 0 QRESDITKER VQVVITDPEKLDQIRQRESDITKERIQKIL LDQIRQRESDITKERIQKILATGANVILTT R Q R E R I 0 2 0 1 0 1 2 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 10 2 1260.6422 P17987 P17987 265 274 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 2.184E-14 215.06 By MS/MS 5.62 2.47 2 1 4 3 3 13 33949000 33949000 0 11749 619 12466;12467 29544;29545;29546;29547;29548;29549;29550;29551;29552;29553;29554;29555;29556 20861;20862;20863;20864;20865;20866;20867;20868;20869 20868 5 322620 0 QRFDQPLEASTWLK WVKNCRDLLQSSYNKQRFDQPLEASTWLKN KQRFDQPLEASTWLKNFKTTNERFLNQIKV K Q R L K N 1 1 0 1 0 2 1 0 0 0 2 1 0 1 1 1 1 1 0 0 0 0 14 1 1717.8788 P51398 P51398 176 189 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0072309 147.26 By MS/MS 7 0 1 1 0 0 0 11750 963 12468 29557 20870 20870 0 0 0 QRGDPQTQLEAMELYLAR NTLQTNAGYLEQVKRQRGDPQTQLEAMELY DPQTQLEAMELYLARSGLQVEDLDRLNIIH R Q R A R S 2 2 0 1 0 3 2 1 0 0 3 0 1 0 1 0 1 0 1 0 0 0 18 1 2118.0528 Q05932 Q05932 68 85 FPGS Folylpolyglutamate synthase, mitochondrial yes yes 3 0.052868 53.255 By MS/MS 6 0 1 1 1065700 1065700 0 11751 1271 12469 29558 20871 20871 1 8310.5 0 QRLAMDLRMLSR ______________________________ ______________________________ M Q R S R E 1 3 0 1 0 1 0 0 0 0 3 0 2 0 0 1 0 0 0 0 0 0 12 2 1488.8017 Q8WU67 Q8WU67 2 13 ABHD3 Phospholipase ABHD3 yes yes 2 0.019208 61.65 By MS/MS 8 0 1 1 857580 857580 0 11752 2011 12470 29559 20872 20872 1319 1 56574 0 QRLEDLATLIQK IRNPRTLFKLEDLRKQRLEDLATLIQKIYR LRKQRLEDLATLIQKIYRGWKCRTHFLLMK K Q R Q K I 1 1 0 1 0 2 1 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 12 1 1426.8144 O43795 O43795 702 713 MYO1B Unconventional myosin-Ib yes yes 2 0.004228 150.09 By MS/MS 4 0 1 1 0 0 0 11753 223 12471 29560 20873 20873 0 0 0 QRPGQQVATCVR SPQIGDKVEFSISDKQRPGQQVATCVRLLG SDKQRPGQQVATCVRLLGRNSNSKRLLGYV K Q R V R L 1 2 0 0 1 3 0 1 0 0 0 0 0 0 1 0 1 0 0 2 0 0 12 1 1398.715 O75534 O75534 497 508 CSDE1 Cold shock domain-containing protein E1 yes yes 2;3 3.7028E-15 215.72 By MS/MS 4.5 0.866 1 3 3 1 8 5326900 5326900 0 11754 316 12472;12473 29561;29562;29563;29564;29565;29566;29567;29568 20874;20875;20876;20877 20875 2 209670 0 QRPQATAEQIR GNWEQPQNQNQTQHKQRPQATAEQIRLAQM TQHKQRPQATAEQIRLAQMISDHNDADFEE K Q R I R L 2 2 0 0 0 3 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 11 1 1296.6898 Q14157 Q14157 27 37 UBAP2L Ubiquitin-associated protein 2-like yes yes 2;3 6.2217E-15 223.31 By MS/MS By matching 3.2 0.4 4 1 4 1 2782100 2769400 12624 11755 1411 12474;12475 29569;29570;29571;29572;29573 20878;20879;20880 20880 2 72296 18092 QRQEEEAR PELALALRVSMEEQRQRQEEEARRAAAASA VSMEEQRQRQEEEARRAAAASAAEAGIATT R Q R A R R 1 2 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 1044.4948 P55036;A2A3N6 P55036 229 236 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 2 0.00023564 201.39 By MS/MS By matching 6 0 2 1 1 824010 817670 6343 11756 1023 12476 29574;29575 20881 20881 1 6376.2 19454 QRQEEEARR PELALALRVSMEEQRQRQEEEARRAAAASA SMEEQRQRQEEEARRAAAASAAEAGIATTG R Q R R R A 1 3 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 1200.5959 P55036 P55036 229 237 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 2;3 0.0031066 128.36 By MS/MS 6 0 2 2 2020600 2020600 0 11757 1023 12477 29576;29577 20882;20883 20882 2 15756 0 QRVEQFAR LLKDSETSQRLANLRQRVEQFARAFPMPGF QRLANLRQRVEQFARAFPMPGFDEH_____ R Q R A R A 1 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 8 1 1032.5465 P34897 P34897 487 494 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.022719 149.4 By MS/MS 6 0 1 1 6841400 6841400 0 11758 777 12478 29578 20884 20884 1 53350 0 QRYEDQLK RQHQARAQYQDKLARQRYEDQLKQQQLLNE YQDKLARQRYEDQLKQQQLLNEENLRKQEE R Q R L K Q 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 8 1 1078.5407 Q5T9A4;Q9NVI7 Q9NVI7 187 194 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.05301 65.246 By MS/MS 5 0 1 1 879090 879090 0 11759 2655;1634 12479 29579 20885 20885 1 36134 0 QRYEDQLKQQQLLNEENLR RQHQARAQYQDKLARQRYEDQLKQQQLLNE DQLKQQQLLNEENLRKQEESVQKQEAMRRA R Q R L R K 0 2 2 1 0 5 3 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 19 2 2444.2408 Q5T9A4;Q9NVI7 Q9NVI7 187 205 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 8.5241E-05 120.9 By MS/MS 5.67 0.471 1 2 3 6123000 6123000 0 11760 2655;1634 12480;12481 29580;29581;29582 20886;20887;20888 20888 1 47747 0 QSAESVSKGGEK RKIKEGVEEAAKTAKQSAESVSKGGEKLGR TAKQSAESVSKGGEKLGRTAAFRALSQGVE K Q S E K L 1 0 0 0 0 1 2 2 0 0 0 2 0 0 0 3 0 0 0 1 0 0 12 1 1205.5888 O43615 O43615 158 169 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 1.0163E-05 177.44 By MS/MS 7 0.707 1 2 1 4 1075000 1075000 0 11761 209 12482;12483 29583;29584;29585;29586 20889;20890 20890 1 18525 0 QSAGAVVIILPR RLLDFSYEQYQKALRQSAGAVVIILPRAMA ALRQSAGAVVIILPRAMAAVPQDVVRQFME R Q S P R A 2 1 0 0 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 2 0 0 12 0 1222.7398 Q969V3 Q969V3 103 114 NCLN Nicalin yes yes 2 8.1148E-33 255.39 By MS/MS 6 0 1 1 3524600 3524600 0 11762 2109 12484 29587 20891 20891 1 27485 0 QSDTSGPVTTSK PLSPKKGSEASAASRQSDTSGPVTTSKSSS ASRQSDTSGPVTTSKSSSLGSFYHLPSYLK R Q S S K S 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 3 3 0 0 1 0 0 12 0 1206.5728 P42858 P42858 1212 1223 HTT Huntingtin yes yes 2 0.00042279 142.19 By MS/MS 2 0.816 1 1 1 3 753700 753700 0 11763 858 12485 29588;29589;29590 20892;20893 20892 2 35909 0 QSDVMIVAGTLTNK YDMDRFGVVFRASPRQSDVMIVAGTLTNKM RQSDVMIVAGTLTNKMAPALRKVYDQMPEP R Q S N K M 1 0 1 1 0 1 0 1 0 1 1 1 1 0 0 1 2 0 0 2 0 0 14 0 1475.7654 O75251 O75251 116 129 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2 9.5627E-37 270.45 By MS/MS 9.5 0.5 1 1 2 3086100 3086100 0 11764 293 12486 29591;29592 20894;20895 20894 162 2 1963300 0 QSEDLGSQFTEIFIK ISNEEEEEVEENSTRQSEDLGSQFTEIFIK QSEDLGSQFTEIFIKQQENVTLLLSLLEEF R Q S I K Q 0 0 0 1 0 2 2 1 0 2 1 1 0 2 0 2 1 0 0 0 0 0 15 0 1740.857 O60763 O60763 105 119 USO1 General vesicular transport factor p115 yes yes 2 1.7973E-06 183.06 By MS/MS 4 0 1 1 377560 377560 0 11765 264 12487 29593 20896 20896 1 10307 0 QSEPAAPPLEVSEEQVAR PPLRQRQNVNYQGGRQSEPAAPPLEVSEEQ PAAPPLEVSEEQVARLMEMGFSRGDALEAL R Q S A R L 3 1 0 0 0 2 4 0 0 0 1 0 0 0 3 2 0 0 0 2 0 0 18 0 1935.9538 Q8NBM4 Q8NBM4 295 312 UBAC2 Ubiquitin-associated domain-containing protein 2 yes yes 2 0.0075474 84.195 By MS/MS 1.8 0.748 2 2 1 5 1109500 1109500 0 11766 1942 12488;12489 29594;29595;29596;29597;29598 20897;20898;20899 20899 2 50014 0 QSFLTEVEQLSR KRLKENADLEWTAVKQSFLTEVEQLSRFRH AVKQSFLTEVEQLSRFRHPNIVDFAGYCAQ K Q S S R F 0 1 0 0 0 2 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 12 0 1435.7307 P51617 P51617 254 265 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 1.4056E-16 222.18 By MS/MS 5 0 2 2 396450 396450 0 11767 971 12490;12491 29599;29600 20900;20901;20902 20900 2 16296 0 QSFTCALQK FHKLFLSVPTEEPLKQSFTCALQKEILYQG TEEPLKQSFTCALQKEILYQGKLFVSENWI K Q S Q K E 1 0 0 0 1 2 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 9 0 1081.5226 Q96HH9 Q96HH9 127 135 GRAMD3 GRAM domain-containing protein 3 yes yes 2 0.0051117 101.25 By MS/MS 4 0.816 1 1 1 3 0 0 0 11768 2191 12492 29601;29602;29603 20903;20904 20904 0 0 0 QSGEAFVELGSEDDVK DGAAGVHFIYTREGRQSGEAFVELGSEDDV SGEAFVELGSEDDVKMALKKDRESMGHRYI R Q S V K M 1 0 0 2 0 1 3 2 0 0 1 1 0 1 0 2 0 0 0 2 0 0 16 0 1708.7792 P52597 P52597 53 68 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 2 0.00044516 161.87 By MS/MS 6.5 0.5 1 1 2 2498600 2498600 0 11769 988 12493 29604;29605 20905 20905 1 30447 0 QSGESIDIITR FILTAKYNACILEYKQSGESIDIITRAHGN LEYKQSGESIDIITRAHGNVQDRIGRPSET K Q S T R A 0 1 0 1 0 1 1 1 0 3 0 0 0 0 0 2 1 0 0 0 0 0 11 0 1217.6252 Q16531 Q16531 93 103 DDB1 DNA damage-binding protein 1 yes yes 2 0.009566 98.754 By MS/MS 2.5 1.12 1 1 1 1 4 2720600 2720600 0 11770 1537 12494 29606;29607;29608;29609 20906;20907;20908;20909 20909 4 79415 0 QSGGAGQYGK ETITAPVPFDFTHKKQSGGAGQYGKVIGVL FTHKKQSGGAGQYGKVIGVLEPLDPEDYTK K Q S G K V 1 0 0 0 0 2 0 4 0 0 0 1 0 0 0 1 0 0 1 0 0 0 10 0 951.44101 Q96RP9 Q96RP9 542 551 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0012787 119.62 By MS/MS By matching 5 0 2 1 1 1087700 1080200 7476.5 11771 2247 12495 29610;29611 20910 20910 1 44400 22123 QSGSRGGSGGGGSISGGGYGSGGGSGGR GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R Q S G R Y 0 2 0 0 0 1 0 16 0 1 0 0 0 0 0 7 0 0 1 0 0 0 28 1 2255.9864 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 545 572 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.017203 42.828 By matching By MS/MS 1.5 0.5 1 1 1 1 108110 73892 34217 + 11772 52 12496 29612;29613 20911 20911 1 3672.8 34217 QSHGAAPCSGGSQ EFLSLLGDIATDYHKQSHGAAPCSGGSQ__ HKQSHGAAPCSGGSQ_______________ K Q S S Q - 2 0 0 0 1 2 0 3 1 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1242.5047 P31151;Q86SG5 P31151 89 101 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 2 1.1253E-07 185.99 By MS/MS 8 0 1 1 599710 0 599710 11773 750 12497 29614 20912 20912 1 0 5116300 QSHLQAGVSK YSAISSSKKKELLKRQSHLQAGVSKLNEAK ELLKRQSHLQAGVSKLNEAKALVDELNRKA R Q S S K L 1 0 0 0 0 2 0 1 1 0 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1053.5567 Q8NCM8 Q8NCM8 2894 2903 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 3 0.032871 67.214 By MS/MS 1 0 1 1 0 0 0 11774 1954 12498 29615 20913 20913 1 0 0 QSICNLLCR PQLFSRLNHPEVYVRQSICNLLCRVAQDSP PEVYVRQSICNLLCRVAQDSPHLILYPAIV R Q S C R V 0 1 1 0 2 1 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1162.5587 Q96Q15 Q96Q15 1839 1847 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.015368 87.639 By MS/MS 1 0 1 1 0 0 0 11775 2241 12499 29616 20914 20914 0 0 0 QSIINPDWNFEK SSLNLIGKAKTKENRQSIINPDWNFEKMGI ENRQSIINPDWNFEKMGIGGLDKEFSDIFR R Q S E K M 0 0 2 1 0 1 1 0 0 2 0 1 0 1 1 1 0 1 0 0 0 0 12 0 1489.7201 P46459 P46459 206 217 NSF Vesicle-fusing ATPase yes yes 2 8.6302E-05 158.08 By MS/MS 5.33 0.471 2 1 3 5199800 5199800 0 11776 881 12500;12501 29617;29618;29619 20915;20916 20915 1 213730 0 QSKPVTTPEEIAQVATISANGDK GVMLAVDAVIAELKKQSKPVTTPEEIAQVA EEIAQVATISANGDKEIGNIISDAMKKVGR K Q S D K E 3 0 1 1 0 2 2 1 0 2 0 2 0 0 2 2 3 0 0 2 0 0 23 1 2383.2231 P10809 P10809 158 180 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 1.7253E-20 223.76 By MS/MS 5.8 0.4 1 4 5 17207000 17207000 0 11777 544 12502;12503 29620;29621;29622;29623;29624 20917;20918;20919;20920 20919 2 134180 0 QSKPVTTPEEIAQVATISANGDKEIGNIISDAMK GVMLAVDAVIAELKKQSKPVTTPEEIAQVA NGDKEIGNIISDAMKKVGRKGVITVKDGKT K Q S M K K 4 0 2 2 0 2 3 2 0 5 0 3 1 0 2 3 3 0 0 2 0 0 34 2 3554.8138 P10809 P10809 158 191 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.0025525 49.199 By MS/MS 6 0 1 1 0 0 0 11778 544 12504 29625 20921 20921 323 0 0 0 QSLEASLAETEGR VQALEIELQSQLALKQSLEASLAETEGRYC LKQSLEASLAETEGRYCVQLSQIQAQISAL K Q S G R Y 2 1 0 0 0 1 3 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 13 0 1389.6736 CON__P13645;P13645;CON__P02535-1 CON__P13645 387 399 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.7939E-17 215.77 By MS/MS By MS/MS 4.9 2.96 4 2 2 2 2 2 2 1 3 1 10 11 11758000 7815700 3942200 + 11779 49 12505;12506 29626;29627;29628;29629;29630;29631;29632;29633;29634;29635;29636;29637;29638;29639;29640;29641;29642;29643;29644;29645;29646 20922;20923;20924;20925;20926;20927;20928;20929;20930;20931;20932;20933;20934;20935;20936;20937;20938;20939;20940 20933 16 1320300 12979000 QSLIDWNNPAIINK RHSVATAADLELKSKQSLIDWNNPAIINKM KQSLIDWNNPAIINKMYKVYLGDIPLKTKE K Q S N K M 1 0 3 1 0 1 0 0 0 3 1 1 0 0 1 1 0 1 0 0 0 0 14 0 1624.8573 Q5VYK3 Q5VYK3 288 301 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 1.2643E-12 210.95 By MS/MS 2.67 0.471 1 2 3 675060 675060 0 11780 1657 12507;12508 29647;29648;29649 20941;20942 20941 1 17623 0 QSLPPGLAVK YTLVITDKEKAEKLKQSLPPGLAVKELK__ AEKLKQSLPPGLAVKELK____________ K Q S V K E 1 0 0 0 0 1 0 1 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1008.5968 P63173 P63173 58 67 RPL38 60S ribosomal protein L38 yes yes 2 0.004493 109.11 By MS/MS 10 0 2 2 1917900 1917900 0 11781 1173 12509;12510 29650;29651 20943;20944 20943 1 2038500 0 QSLQVIESAMER KLKKQLYNIYAKHTKQSLQVIESAMERDRY HTKQSLQVIESAMERDRYMSPMEAQEFGIL K Q S E R D 1 1 0 0 0 2 2 0 0 1 1 0 1 0 0 2 0 0 0 1 0 0 12 0 1389.6922 Q16740 Q16740 215 226 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 2 0.003031 108.98 By MS/MS 8 0 2 2 1087500 1087500 0 11782 1545 12511;12512 29652;29653 20945;20946 20945 1172 1 71743 0 QSLSHMLSAK ECSPLMNDIFNKECRQSLSHMLSAKLEEEK NKECRQSLSHMLSAKLEEEKLSQKKESEKR R Q S A K L 1 0 0 0 0 1 0 0 1 0 2 1 1 0 0 3 0 0 0 0 0 0 10 0 1100.5648 P53618 P53618 637 646 COPB1 Coatomer subunit beta yes yes 2 0.024201 82.831 By MS/MS 3.5 0.5 1 1 2 0 0 0 11783 1004 12513 29654;29655 20947 20947 0 0 0 QSMEEFRSLASR GNDLQRCGRISNQMKQSMEEFRSLASRYGD QMKQSMEEFRSLASRYGDLYQASFDADSAT K Q S S R Y 1 2 0 0 0 1 2 0 0 0 1 0 1 1 0 3 0 0 0 0 0 0 12 1 1439.6827 Q9NVH2 Q9NVH2 673 684 INTS7 Integrator complex subunit 7 yes yes 2 0.029776 66.92 By MS/MS By matching 1.67 0.471 1 2 1 2 0 0 0 11784 2652 12514 29656;29657;29658 20948 20948 1566 0 0 0 QSNCVTLLDTNQVVR DTSFYRGKKKRGTPKQSNCVTLLDTNQVVR QSNCVTLLDTNQVVRILPPGEVPLKDIYPK K Q S V R I 0 1 2 1 1 2 0 0 0 0 2 0 0 0 0 1 2 0 0 3 0 0 15 0 1745.873 A3KMH1 A3KMH1 1413 1427 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 1.4657E-10 193.28 By MS/MS 2.5 0.957 1 2 2 1 6 1581500 1581500 0 11785 13 12515;12516 29659;29660;29661;29662;29663;29664 20949;20950 20949 1 62747 0 QSQALPPR TKRAARRPYKPIALRQSQALPPRPPPPAPV YKPIALRQSQALPPRPPPPAPVNDEPIVIE R Q S P R P 1 1 0 0 0 2 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 8 0 895.48756 Q13330 Q13330 692 699 MTA1 Metastasis-associated protein MTA1 yes yes 2 0.021206 105.2 By MS/MS 7 0 1 1 3582500 3582500 0 11786 1357 12517 29665 20951 20951 1 64021 0 QSQIQVFEDGADTTSPETPDSSASK RKYFTCDEGHGIFVRQSQIQVFEDGADTTS ADTTSPETPDSSASKVLKREGTDTTAKTSK R Q S S K V 2 0 0 3 0 3 2 1 0 1 0 1 0 1 2 5 3 0 0 1 0 0 25 0 2624.1726 Q14203 Q14203 91 115 DCTN1 Dynactin subunit 1 yes yes 2 3.0823E-05 95.197 By MS/MS 3 0 1 1 807330 807330 0 11787 1420 12518 29666 20952 20952 1 21075 0 QSQQIAQDELR TLSVIRDYLVQKLQKQSQQIAQDELRVRRY KLQKQSQQIAQDELRVRRYREETTRIRQEI K Q S L R V 1 1 0 1 0 4 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 11 0 1314.6528 Q9H270 Q9H270 782 792 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 2 0.00052545 141.71 By MS/MS 5 0.816 1 1 1 3 1043200 1043200 0 11788 2473 12519 29667;29668;29669 20953;20954 20953 2 24759 0 QSRGEPPLPEEDLSK KHQYQQRRQQENMQRQSRGEPPLPEEDLSK QSRGEPPLPEEDLSKLFKPPQPPARMDSLL R Q S S K L 0 1 0 1 0 1 3 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 15 1 1680.8319 O15372 O15372 289 303 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.0056518 144.51 By MS/MS 7 0 1 1 0 0 0 11789 173 12520 29670 20955 20955 0 0 0 QSRLEQEEQQR HYALEDDPLAAFKQRQSRLEQEEQQRLAEL FKQRQSRLEQEEQQRLAELSKSNKQNLFLG R Q S Q R L 0 2 0 0 0 4 3 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 11 1 1429.691 Q3ZCQ8 Q3ZCQ8 315 325 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 4.1021E-21 238.01 By MS/MS By matching 7.89 0.994 4 3 1 1 8 1 13224000 13196000 27972 11790 1573 12521;12522 29671;29672;29673;29674;29675;29676;29677;29678;29679 20956;20957;20958;20959;20960;20961 20957 4 788830 114830 QSSFALLGDLTK TLMYQCMQDKMPEVRQSSFALLGDLTKACF EVRQSSFALLGDLTKACFQHVKPCIADFMP R Q S T K A 1 0 0 1 0 1 0 1 0 0 3 1 0 1 0 2 1 0 0 0 0 0 12 0 1278.682 Q92973;O14787 Q92973 693 704 TNPO1;TNPO2 Transportin-1;Transportin-2 yes no 2 1.0773E-05 174.57 By MS/MS 4.67 0.745 3 2 1 6 5586900 5586900 0 11791 2093 12523;12524 29680;29681;29682;29683;29684;29685 20962;20963;20964;20965 20962 2 166210 0 QSSGASSSSFSSSR KSSRFSGGFGARDYRQSSGASSSSFSSSRA RQSSGASSSSFSSSRASSSRSGGGGHGSSR R Q S S R A 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 9 0 0 0 0 0 0 14 0 1360.5855 O00571 O00571 604 617 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 4.2417E-05 148.13 By MS/MS By MS/MS 5.67 2.49 1 1 5 1 1 1 1 1 10 2 20902000 20686000 216070 11792 105 12525;12526 29686;29687;29688;29689;29690;29691;29692;29693;29694;29695;29696;29697 20966;20967;20968;20969;20970;20971;20972 20972 6 1082400 639350 QSSGSATNVASTPDNR PPGSYASLGRIRTRRQSSGSATNVASTPDN SSGSATNVASTPDNRGRSRAKVVSQSQRSR R Q S N R G 2 1 2 1 0 1 0 1 0 0 0 0 0 0 1 4 2 0 0 1 0 0 16 0 1590.7234 Q7Z460 Q7Z460 645 660 CLASP1 CLIP-associating protein 1 yes yes 2 1.4097E-07 166.86 By MS/MS 3 0 1 1 457110 457110 0 11793 1790 12527 29698 20973 20973 1 11933 0 QSSSYGPHGYGSGR QSPSPSRGRHESGSRQSSSYGPHGYGSGRS RQSSSYGPHGYGSGRSSSRGPYESGSGHSS R Q S G R S 0 1 0 0 0 1 0 4 1 0 0 0 0 0 1 4 0 0 2 0 0 0 14 0 1438.6226 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 554 567 HRNR Hornerin yes no 2 0.0019621 105.66 By matching By MS/MS 3.33 1.49 1 1 1 1 2 1 5 0 0 0 + 11794 64 12528 29699;29700;29701;29702;29703;29704 20974;20975 20974 0 0 0 QSSSYGQHESASR SGQASSSGQHGSSSRQSSSYGQHESASRHS SRQSSSYGQHESASRHSSGRGQHSSGSGQS R Q S S R H 1 1 0 0 0 2 1 1 1 0 0 0 0 0 0 5 0 0 1 0 0 0 13 0 1422.6124 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 396 408 HRNR Hornerin yes no 2;3 0.00021759 137.4 By matching By MS/MS 3.42 1.61 2 2 2 2 3 1 1 11 494080 0 494080 + 11795 64 12529;12530 29705;29706;29707;29708;29709;29710;29711;29712;29713;29714;29715;29716 20976;20977;20978;20979 20978 1 0 982700 QSTDEEVTSLAK LQSTRIGMSVNAIRKQSTDEEVTSLAKSLI IRKQSTDEEVTSLAKSLIKSWKKLLDGPST K Q S A K S 1 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 12 0 1306.6252 P23193 P23193 56 67 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0020216 121.68 By MS/MS 6.5 0.5 1 1 2 2515900 2515900 0 11796 664 12531 29717;29718 20980 20980 1 41704 0 QSTIVCHNR HNGDKYLAIAPPIIKQSTIVCHNRVDPNGS APPIIKQSTIVCHNRVDPNGSRYLLGDMEG K Q S N R V 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 9 0 1113.5349 Q16531 Q16531 255 263 DDB1 DNA damage-binding protein 1 yes yes 2 0.0064761 99.442 By MS/MS 2.5 1.12 1 1 1 1 4 0 0 0 11797 1537 12532 29719;29720;29721;29722 20981;20982 20981 0 0 0 QSVEADINGLR ADDFRLKYENEVALRQSVEADINGLRRVLD VALRQSVEADINGLRRVLDELTLTKADLEM R Q S L R R 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1200.6099 CON__P13645;P13645;CON__P02535-1;CON__Q2M2I5;Q2M2I5 CON__P13645 246 256 KRT10;KRT24 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 24 no no 2 0.0015953 125.68 By matching By MS/MS 5.82 2.92 1 1 1 1 1 1 1 1 2 1 2 9 2487000 849190 1637800 + 11798 49 12533 29723;29724;29725;29726;29727;29728;29729;29730;29731;29732;29733 20983;20984;20985;20986;20987 20985 5 525760 4973900 QSVEADINGLRR ADDFRLKYENEVALRQSVEADINGLRRVLD ALRQSVEADINGLRRVLDELTLTKADLEMQ R Q S R R V 1 2 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 12 1 1356.711 CON__P13645;P13645;CON__P02535-1 CON__P13645 246 257 KRT10 Keratin, type I cytoskeletal 10 no no 2;3 0.00026579 160.75 By MS/MS By MS/MS 5.74 2.57 1 1 2 2 4 3 1 4 1 9 10 18489000 16962000 1527200 + 11799 49 12534;12535 29734;29735;29736;29737;29738;29739;29740;29741;29742;29743;29744;29745;29746;29747;29748;29749;29750;29751;29752 20988;20989;20990;20991;20992;20993;20994;20995;20996;20997;20998;20999;21000 20997 8 1696900 6139500 QSVLEGLSFSR CDGQADQAAKVEKMRQSVLEGLSFSRQSHT EKMRQSVLEGLSFSRQSHTLPFPPPPALPF R Q S S R Q 0 1 0 0 0 1 1 1 0 0 2 0 0 1 0 3 0 0 0 1 0 0 11 0 1221.6354 Q9NZB2 Q9NZB2 840 850 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 0.035174 68.069 By MS/MS 3 0 1 1 0 0 0 11800 2709 12536 29753 21001 21001 0 0 0 QSVVVLMGSLAK FLKNAPNDASYDAVRQSVVVLMGSLAKHLD AVRQSVVVLMGSLAKHLDKSDPKVKPIVAK R Q S A K H 1 0 0 0 0 1 0 1 0 0 2 1 1 0 0 2 0 0 0 3 0 0 12 0 1230.7006 Q92616 Q92616 1317 1328 GCN1L1 Translational activator GCN1 yes yes 2 0.0089195 84.821 By MS/MS 2.33 0.471 2 1 3 517910 517910 0 11801 2068 12537;12538 29754;29755;29756 21002;21003 21003 1 25743 0 QSVYEEK LEDRDLFVMRLKAARQSVYEEKLKQFEERL VMRLKAARQSVYEEKLKQFEERLAEERHNR R Q S E K L 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 7 0 881.41306 Q14152 Q14152 769 775 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.020207 125.81 By MS/MS By matching 3.33 0.471 2 1 2 1 1653500 1557600 95945 11802 1409 12539 29757;29758;29759 21004 21004 1 40780 137510 QSVYEEKLK LEDRDLFVMRLKAARQSVYEEKLKQFEERL RLKAARQSVYEEKLKQFEERLAEERHNRLE R Q S L K Q 0 0 0 0 0 1 2 0 0 0 1 2 0 0 0 1 0 0 1 1 0 0 9 1 1122.5921 Q14152 Q14152 769 777 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.003113 109.44 By MS/MS 3 0 1 1 435900 435900 0 11803 1409 12540 29760 21005 21005 1 11379 0 QTADFLQEYVTNK FHKEHFKYVGTKLPKQTADFLQEYVTNKTK PKQTADFLQEYVTNKTKKTEELRKTVEDLD K Q T N K T 1 0 1 1 0 2 1 0 0 0 1 1 0 1 0 0 2 0 1 1 0 0 13 0 1555.7518 Q9ULX6 Q9ULX6 427 439 AKAP8L A-kinase anchor protein 8-like yes yes 2 4.0177E-12 209.67 By MS/MS 4.33 0.471 2 1 3 516400 516400 0 11804 2830 12541;12542 29761;29762;29763 21006;21007 21006 1 14097 0 QTDVGITHFR MGHVLIPQSDLRWSKQTDVGITHFRSGMSH LRWSKQTDVGITHFRSGMSHEEDQLIPNLY K Q T F R S 0 1 0 1 0 1 0 1 1 1 0 0 0 1 0 0 2 0 0 1 0 0 10 0 1172.5938 Q6P2Q9 Q6P2Q9 1345 1354 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.00048277 120.09 By MS/MS 2 0.816 1 1 1 3 0 0 0 11805 1706 12543 29764;29765;29766 21008;21009;21010 21010 0 0 0 QTDVLQQLSIQMANAK SFEWLSQMRFYFDPKQTDVLQQLSIQMANA TDVLQQLSIQMANAKFNYGFEYLGVQDKLV K Q T A K F 2 0 1 1 0 4 0 0 0 1 2 1 1 0 0 1 1 0 0 1 0 0 16 0 1786.9247 Q14204 Q14204 1850 1865 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.3112E-06 154.67 By MS/MS 1.5 0.5 2 2 4 362310 362310 0 11806 1421 12544;12545 29767;29768;29769;29770 21011;21012;21013 21011 1114 1 17785 0 QTEDVAEVLNR RSYSSRNGSIPTYMRQTEDVAEVLNRCASS TYMRQTEDVAEVLNRCASSNWSERKEGLLG R Q T N R C 1 1 1 1 0 1 2 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1272.631 O75122 O75122 651 661 CLASP2 CLIP-associating protein 2 yes yes 2 1.0528E-06 197.79 By MS/MS 3 0 1 1 1994200 1994200 0 11807 279 12546 29771 21014 21014 1 52059 0 QTELFAHFIQPAAQK KMQTDRANRFEYLLKQTELFAHFIQPAAQK QTELFAHFIQPAAQKTPTSPLKMKPGRPRI K Q T Q K T 3 0 0 0 0 3 1 0 1 1 1 1 0 2 1 0 1 0 0 0 0 0 15 0 1727.8995 O60264 O60264 98 112 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 1.4678E-06 155.02 By MS/MS 3 0 1 1 0 0 0 11808 240 12547 29772 21015 21015 0 0 0 QTEQADLINELYQGK ELCRVMFDALEQKWKQTEQADLINELYQGK QTEQADLINELYQGKLKDYVRCLECGYEGW K Q T G K L 1 0 1 1 0 3 2 1 0 1 2 1 0 0 0 0 1 0 1 0 0 0 15 0 1748.8581 Q96K76 Q96K76 290 304 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 8.3176E-05 137.09 By MS/MS 3 0 2 2 295300 295300 0 11809 2216 12548;12549 29773;29774 21016;21017 21016 1 7708.8 0 QTESTSFLEK AGYYCGFKATAAGVKQTESTSFLEKKVKKK AAGVKQTESTSFLEKKVKKKFDWTFEQTVE K Q T E K K 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 2 2 0 0 0 0 0 10 0 1168.5612 P60900 P60900 172 181 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.0010293 121.5 By MS/MS 8.5 0.5 1 1 2 6064600 6064600 0 11810 1077 12550 29775;29776 21018;21019 21018 2 935970 0 QTESTSFLEKK AGYYCGFKATAAGVKQTESTSFLEKKVKKK AGVKQTESTSFLEKKVKKKFDWTFEQTVET K Q T K K V 0 0 0 0 0 1 2 0 0 0 1 2 0 1 0 2 2 0 0 0 0 0 11 1 1296.6561 P60900 P60900 172 182 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.0010406 128.51 By MS/MS 8 0 1 1 0 0 0 11811 1077 12551 29777 21020 21020 0 0 0 QTEVLLQPNPNAR SKAECTKIWTEKIMKQTEVLLQPNPNARIE MKQTEVLLQPNPNARIEEFVYEKLDRKAPS K Q T A R I 1 1 2 0 0 2 1 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 13 0 1478.7841 Q9Y371 Q9Y371 62 74 SH3GLB1 Endophilin-B1 yes yes 2 0.0042586 132.17 By MS/MS 7 0 1 1 1313000 1313000 0 11812 2914 12552 29778 21021 21021 1 23463 0 QTFENQVNR AHNNELEPTPGNTLRQTFENQVNRILNDAR PGNTLRQTFENQVNRILNDARDKTGSSAQK R Q T N R I 0 1 2 0 0 2 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 9 0 1134.5418 P24928 P24928 735 743 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 4.3395E-06 190.62 By MS/MS 2.5 0.5 1 1 2 749570 749570 0 11813 681 12553 29779;29780 21022 21022 1 32096 0 QTFSPFGQIMEIR YCGGIASGLTDQLMRQTFSPFGQIMEIRVF MRQTFSPFGQIMEIRVFPEKGYSFVRFSTH R Q T I R V 0 1 0 0 0 2 1 1 0 2 0 0 1 2 1 1 1 0 0 0 0 0 13 0 1552.7708 P31483;Q01085 Q01085 223 235 TIA1;TIAL1 Nucleolysin TIA-1 isoform p40;Nucleolysin TIAR no no 2 1.6891E-08 193.49 By MS/MS 7.33 0.471 2 1 3 1626800 1626800 0 11814 754;1239 12554;12555 29781;29782;29783 21023;21024 21023 507 1 33529 0 QTFTHNPLLQPGK RMRNQLELAARGPLRQTFTHNPLLQPGKDN LRQTFTHNPLLQPGKDNPPNIPSSSSKPKS R Q T G K D 0 0 1 0 0 2 0 1 1 0 2 1 0 1 2 0 2 0 0 0 0 0 13 0 1479.7834 Q15070 Q15070 399 411 OXA1L Mitochondrial inner membrane protein OXA1L yes yes 2;3 0.0023229 101.39 By MS/MS 7 0 2 2 2591500 2591500 0 11815 1477 12556;12557 29784;29785 21025;21026 21026 1 46311 0 QTGEGVGPQEYTLLK IYSPKDGQPCMDHDRQTGEGVGPQEYTLLK QTGEGVGPQEYTLLKLKVLEPYPSKLSGLK R Q T L K L 0 0 0 0 0 2 2 3 0 0 2 1 0 0 1 0 2 0 1 1 0 0 15 0 1618.8203 Q9P2J5 Q9P2J5 254 268 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 1.7276E-05 158.86 By MS/MS By matching 3.25 0.433 3 1 3 1 6764600 6735400 29167 11816 2738 12558;12559 29786;29787;29788;29789 21027;21028 21027 1 176490 41803 QTGKEVAGLVTLK SYFLKAAAGIEKGARQTGKEVAGLVTLKHV ARQTGKEVAGLVTLKHVYEIARIKAQDEAF R Q T L K H 1 0 0 0 0 1 1 2 0 0 2 2 0 0 0 0 2 0 0 2 0 0 13 1 1342.782 Q9Y3B7 Q9Y3B7 103 115 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2 2.566E-06 182.41 By MS/MS 9 0 1 1 0 0 0 11817 2927 12560 29790 21029 21029 0 0 0 QTHNNAVVK VKKRMRAEMELGLRKQTHNNAVVKMLPSFV ELGLRKQTHNNAVVKMLPSFVRRTPDGTEN K Q T V K M 1 0 2 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 2 0 0 9 0 1009.5305 P19367 P19367 502 510 HK1 Hexokinase-1 yes yes 2 0.031261 90.37 By MS/MS 3.5 0.5 1 1 2 878480 878480 0 11818 630 12561 29791;29792 21030 21030 1 23959 0 QTIDNSQGAYQEAFDISK YFRYLAEVACGDDRKQTIDNSQGAYQEAFD DNSQGAYQEAFDISKKEMQPTHPIRLGLAL K Q T S K K 2 0 1 2 0 3 1 1 0 2 0 1 0 1 0 2 1 0 1 0 0 0 18 0 2013.928 P27348 P27348 140 157 YWHAQ 14-3-3 protein theta yes yes 2 1.7211E-43 255.28 By MS/MS 8 0 1 1 1195900 1195900 0 11819 703 12562 29793 21031 21031 1 78891 0 QTIDNSQGAYQEAFDISKK YFRYLAEVACGDDRKQTIDNSQGAYQEAFD NSQGAYQEAFDISKKEMQPTHPIRLGLALN K Q T K K E 2 0 1 2 0 3 1 1 0 2 0 2 0 1 0 2 1 0 1 0 0 0 19 1 2142.0229 P27348 P27348 140 158 YWHAQ 14-3-3 protein theta yes yes 3 0.0090573 91.926 By MS/MS 8 0 1 1 3114400 3114400 0 11820 703 12563 29794 21032 21032 1 205460 0 QTKPEFDQVLQGTAASTK FSTVLTVFPILRHLKQTKPEFDQVLQGTAA PEFDQVLQGTAASTKNKLPGLITSMETIGA K Q T T K N 2 0 0 1 0 3 1 1 0 0 1 2 0 1 1 1 3 0 0 1 0 0 18 1 1947.9902 Q9UPT5 Q9UPT5 441 458 EXOC7 Exocyst complex component 7 yes yes 2;3 3.8568E-07 178.68 By MS/MS 5 0 2 2 1118800 1118800 0 11821 2853 12564;12565 29795;29796 21033;21034 21033 1 45986 0 QTLAIYDR QGNVYGQITVRMHTRQTLAIYDRFGRLMYG TVRMHTRQTLAIYDRFGRLMYGQEDVPKDV R Q T D R F 1 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 978.51345 Q9BRJ2 Q9BRJ2 220 227 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 0.0018693 158.87 By MS/MS 8 0 1 1 2415000 2415000 0 11822 2322 12566 29797 21035 21035 1 159320 0 QTLDALNYLHDNK LERPLTESQIQVVCKQTLDALNYLHDNKII CKQTLDALNYLHDNKIIHRDLKAGNILFTL K Q T N K I 1 0 2 2 0 1 0 0 1 0 3 1 0 0 0 0 1 0 1 0 0 0 13 0 1543.7631 Q9H2G2 Q9H2G2 138 150 SLK STE20-like serine/threonine-protein kinase yes yes 4 0.02262 97.957 By MS/MS 5 0 1 1 6415000 6415000 0 11823 2476 12567 29798 21036 21036 1 263680 0 QTLEKVEK LLNAYAEKGDIDHVKQTLEKVEKSELHLMD GDIDHVKQTLEKVEKSELHLMDRDLLQIIF K Q T E K S 0 0 0 0 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 1 0 0 8 1 973.54441 P42704 P42704 288 295 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00059823 199.7 By MS/MS 3 0 1 1 0 0 0 11824 854 12568 29799 21037 21037 0 0 0 QTLGPGTEQQGSHLNPEQLR MAKHTATHLLNWALRQTLGPGTEQQGSHLN GTEQQGSHLNPEQLRLDVTTQTPLTPEQLR R Q T L R L 0 1 1 0 0 4 2 3 1 0 3 0 0 0 2 1 2 0 0 0 0 0 20 0 2189.0825 Q5JTZ9 Q5JTZ9 644 663 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2;3 4.5743E-40 236.05 By MS/MS 4.5 0.5 2 2 4 7822800 7822800 0 11825 1611 12569;12570 29800;29801;29802;29803 21038;21039 21039 1 235200 0 QTLLDMIAR RDQVVRYGCIRDHLRQTLLDMIARERKGEV IRDHLRQTLLDMIARERKGEVVDRGAIRNA R Q T A R E 1 1 0 1 0 1 0 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1059.5747 Q13618 Q13618 163 171 CUL3 Cullin-3 yes yes 2 0.0059227 113.71 By MS/MS 4.5 0.5 1 1 2 302070 302070 0 11826 1389 12571 29804;29805 21040;21041 21041 2 10724 0 QTLMQHILR TIKKKAAVIIMAVEKQTLMQHILRCDYEAC IMAVEKQTLMQHILRCDYEACRQYLMNLEQ K Q T L R C 0 1 0 0 0 2 0 0 1 1 2 0 1 0 0 0 1 0 0 0 0 0 9 0 1138.6281 O95071 O95071 874 882 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.03905 72.928 By MS/MS 1 0 1 1 0 0 0 11827 364 12572 29806 21042 21042 0 0 0 QTLQEDLLR RLNLVEAFVEDAELRQTLQEDLLRRFPDLN EDAELRQTLQEDLLRRFPDLNRLAKKFQRQ R Q T L R R 0 1 0 1 0 2 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1114.5982 P43246 P43246 374 382 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.0026993 122.28 By MS/MS 3.5 0.5 1 1 2 1833400 1833400 0 11828 862 12573 29807;29808 21043 21043 1 49989 0 QTLQSEQPLQVAR TGLAPPALWDLAADKQTLQSEQPLQVARCT DKQTLQSEQPLQVARCTKIINADSEDPKYI K Q T A R C 1 1 0 0 0 4 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1496.7947 P35998 P35998 85 97 PSMC2 26S protease regulatory subunit 7 yes yes 2 1.5631E-25 245.13 By MS/MS 7 0.816 1 1 1 3 4180300 4180300 0 11829 801 12574 29809;29810;29811 21044 21044 1 73573 0 QTLSTPGTIILGTIPVPK GKMELFSQLFIQAVRQTLSTPGTIILGTIP STPGTIILGTIPVPKGKPLALVEEIRNRKD R Q T P K G 0 0 0 0 0 1 0 2 0 3 2 1 0 0 3 1 4 0 0 1 0 0 18 0 1835.0768 Q9BSD7 Q9BSD7 131 148 NTPCR Cancer-related nucleoside-triphosphatase yes yes 2 0.021258 62.042 By MS/MS 9 0 1 1 0 0 0 11830 2335 12575 29812 21045;21046 21046 0 0 0 QTNDVLLTFEALK QLGSRELMMFYIDLKQTNDVLLTFEALKHL LKQTNDVLLTFEALKHLASLLLHNKFATEF K Q T L K H 1 0 1 1 0 1 1 0 0 0 3 1 0 1 0 0 2 0 0 1 0 0 13 0 1490.7981 Q9Y4B6 Q9Y4B6 364 376 VPRBP Protein VPRBP yes yes 2 0.0064703 100.04 By MS/MS 3 0 1 1 142500 142500 0 11831 2950 12576 29813 21047 21047 1 3720 0 QTNKMESSR FFPHCNSASTRIFGKQTNKMESSRKFKTMK TRIFGKQTNKMESSRKFKTMKDVYTEKRLE K Q T S R K 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 9 1 1079.503 Q05C16 Q05C16 124 132 LRRC63 Leucine-rich repeat-containing protein 63 yes yes 2 0.011499 95.531 By MS/MS 6 0 1 1 0 0 0 11832 1273 12577 29814 21048 21048 1032 1 0 0 QTNPSAMEVEEDDPVPEIR IRESIESEIRRERERQTNPSAMEVEEDDPV SAMEVEEDDPVPEIRRDHFEEAMRFARRSV R Q T I R R 1 1 1 2 0 1 4 0 0 1 0 0 1 0 3 1 1 0 0 2 0 0 19 0 2154.9739 P55072 P55072 714 732 VCP Transitional endoplasmic reticulum ATPase yes yes 2 1.4827E-11 212.03 By MS/MS 4 0 1 1 951920 951920 0 11833 1026 12578 29815 21049 21049 1 25986 0 QTNPSAMEVEEDDPVPEIRR IRESIESEIRRERERQTNPSAMEVEEDDPV AMEVEEDDPVPEIRRDHFEEAMRFARRSVS R Q T R R D 1 2 1 2 0 1 4 0 0 1 0 0 1 0 3 1 1 0 0 2 0 0 20 1 2311.075 P55072 P55072 714 733 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.011007 65.175 By MS/MS 4 0 1 1 2135900 2135900 0 11834 1026 12579 29816 21050 21050 1 58307 0 QTPAGPETEEEPYR SLYFPWDGAEVPPQRQTPAGPETEEEPYRR RQTPAGPETEEEPYRRRNQILSVLAGLAAM R Q T Y R R 1 1 0 0 0 1 4 1 0 0 0 0 0 0 3 0 2 0 1 0 0 0 14 0 1602.7162 Q13505 Q13505 403 416 MTX1 Metaxin-1 yes yes 2 0.0015927 130.69 By MS/MS 8 0 1 1 1401900 1401900 0 11835 1376 12580 29817 21051 21051 1 92483 0 QTQAASASQGSASAAEVLLR VYFAVEDEALLSIYKQTQAASASQGSASAA SASQGSASAAEVLLRTATANGFQMVTSGVQ K Q T L R T 6 1 0 0 0 3 1 1 0 0 2 0 0 0 0 4 1 0 0 1 0 0 20 0 1944.9865 Q969V3 Q969V3 158 177 NCLN Nicalin yes yes 2 6.6377E-143 377.05 By MS/MS 6 0.816 1 1 1 3 12315000 12315000 0 11836 2109 12581 29818;29819;29820 21052 21052 1 103770 0 QTRPILKEQSSSSFSQGQSS SSREVFTSSSSSSSRQTRPILKEQSSSSFS LKEQSSSSFSQGQSS_______________ R Q T S S - 0 1 0 0 0 4 1 1 0 1 1 1 0 1 1 7 1 0 0 0 0 0 20 2 2181.0662 CON__P08779;P08779 CON__P08779 454 473 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.049417 57.414 By MS/MS 3 0 1 1 0 0 0 + 11837 47 12582 29821 21053 21053 0 0 0 QTSGGPVDASSEYQQELER QKLFVDKIREYKSKRQTSGGPVDASSEYQQ GPVDASSEYQQELERELFKLKQMFGNADMN R Q T E R E 1 1 0 1 0 3 3 2 0 0 1 0 0 0 1 3 1 0 1 1 0 0 19 0 2079.9345 P18859 P18859 55 73 ATP5J ATP synthase-coupling factor 6, mitochondrial yes yes 2 4.4323E-08 202.01 By MS/MS 10 0 2 2 937540 937540 0 11838 627 12583;12584 29822;29823 21054;21055 21054 1 996510 0 QTSLDAVAQAVVDR ANQEIAAMIDTEFAKQTSLDAVAQAVVDRV KQTSLDAVAQAVVDRVKRIHSDTFASGGER K Q T D R V 3 1 0 2 0 2 0 0 0 0 1 0 0 0 0 1 1 0 0 3 0 0 14 0 1471.7631 Q15750 Q15750 320 333 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 2.1585E-12 208.51 By MS/MS 6 0 1 1 2104300 2104300 0 11839 1516 12585 29824 21056 21056 1 16409 0 QTSSTPSSLALTSASR PSPNIPIELIPHINKQTSSTPSSLALTSAS TSSTPSSLALTSASRIRERSESLDPDSSMD K Q T S R I 2 1 0 0 0 1 0 0 0 0 2 0 0 0 1 6 3 0 0 0 0 0 16 0 1592.8006 Q5SW79 Q5SW79 859 874 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.00079812 136.33 By MS/MS 3 0.816 1 1 1 3 1158800 1158800 0 11840 1621 12586 29825;29826;29827 21057;21058;21059 21057 3 43334 0 QTTITSHFAK PEPSPSPRITRKSTRQTTITSHFAKGPAKR RKSTRQTTITSHFAKGPAKRKPQEESERAK R Q T A K G 1 0 0 0 0 1 0 0 1 1 0 1 0 1 0 1 3 0 0 0 0 0 10 0 1132.5877 P26358 P26358 164 173 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0085903 92.239 By MS/MS 2 0 1 1 0 0 0 11841 693 12587 29828 21060 21060 0 0 0 QTTPESDFNLQALR PMHGGTLLEDVVGGRQTTPESDFNLQALRS RQTTPESDFNLQALRSRYEALKKSLSKKRE R Q T L R S 1 1 1 1 0 2 1 0 0 0 2 0 0 1 1 1 2 0 0 0 0 0 14 0 1618.7951 Q7Z4H7 Q7Z4H7 821 834 HAUS6 HAUS augmin-like complex subunit 6 yes yes 2 8.4017E-05 164.04 By MS/MS 4 0 2 2 829720 829720 0 11842 1793 12588;12589 29829;29830 21061;21062 21061 1 22651 0 QTTVSNSQQAYQEAFEISK DYFRYLSEVASGDNKQTTVSNSQQAYQEAF SNSQQAYQEAFEISKKEMQPTHPIRLGLAL K Q T S K K 2 0 1 0 0 4 2 0 0 1 0 1 0 1 0 3 2 0 1 1 0 0 19 0 2158.0178 P31946 P31946 141 159 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 2.7975E-44 260.29 By MS/MS 8 0 1 1 1126800 1126800 0 11843 760 12590 29831 21063 21063 1 74335 0 QTVAVGVIK SDYPPLGRFAVRDMRQTVAVGVIKAVDKKA AVRDMRQTVAVGVIKAVDKKAAGAGKVTKS R Q T I K A 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 9 0 913.55967 Q5VTE0;P68104;Q05639 Q5VTE0 431 439 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.010344 104.06 By MS/MS 5.64 2.77 1 1 1 1 1 1 2 1 1 1 11 106090000 106090000 0 11844 1184 12591;12592 29832;29833;29834;29835;29836;29837;29838;29839;29840;29841;29842 21064;21065;21066 21064 2 8695200 0 QTVESIQHAK DIVVLVVAADDGVMKQTVESIQHAKDAQVP DGVMKQTVESIQHAKDAQVPIILAVNKCDK K Q T A K D 1 0 0 0 0 2 1 0 1 1 0 1 0 0 0 1 1 0 0 1 0 0 10 0 1139.5935 P46199 P46199 268 277 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 2 0.0026179 103.7 By MS/MS 5 0 1 1 0 0 0 11845 879 12593 29843 21067 21067 0 0 0 QTVFLLEKPFSVK VVFSTGPQSTKTHWKQTVFLLEKPFSVKAG WKQTVFLLEKPFSVKAGEALKGKVTVHKNK K Q T V K A 0 0 0 0 0 1 1 0 0 0 2 2 0 2 1 1 1 0 0 2 0 0 13 1 1534.8759 O60678 O60678 482 494 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 3.8459E-07 193.62 By MS/MS 5.5 0.5 1 1 2 0 0 0 11846 257 12594 29844;29845 21068 21068 0 0 0 QTVLESIR DIIREQIRLKAAEHRQTVLESIRTAGTLFG LKAAEHRQTVLESIRTAGTLFGEGFRAFVT R Q T I R T 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 8 0 944.5291 Q5T9A4;Q9NVI7 Q9NVI7 268 275 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.006165 132.76 By MS/MS 5.33 0.471 2 1 3 11825000 11825000 0 11847 2655;1634 12595;12596 29846;29847;29848 21069;21070 21069 1 486050 0 QTVMTVVYGVTR VAQVLEGFITRKVVKQTVMTVVYGVTRYGG VVKQTVMTVVYGVTRYGGRLQIEKRLRELS K Q T T R Y 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 3 0 1 4 0 0 12 0 1352.7122 O00411 O00411 992 1003 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 6.2588E-17 226.04 By MS/MS 2.75 0.433 1 3 4 1271200 1271200 0 11848 92 12597;12598;12599 29849;29850;29851;29852 21071;21072;21073 21071 64 1 34177 0 QTYFLPVIGLVDAEK SQRKGKCAVIKTSTRQTYFLPVIGLVDAEK QTYFLPVIGLVDAEKLKPGDLVGVNKDSYL R Q T E K L 1 0 0 1 0 1 1 1 0 1 2 1 0 1 1 0 1 0 1 2 0 0 15 0 1691.9134 P17980 P17980 130 144 PSMC3 26S protease regulatory subunit 6A yes yes 2;3 2.6914E-07 168.02 By MS/MS 6.33 0.471 2 1 3 17305000 17305000 0 11849 618 12600 29853;29854;29855 21074;21075 21074 2 135350 0 QTYSTEPNNLK MVVRNCSSFLIKRNKQTYSTEPNNLKARNS KRNKQTYSTEPNNLKARNSFRYNGLIHRKT K Q T L K A 0 0 2 0 0 1 1 0 0 0 1 1 0 0 1 1 2 0 1 0 0 0 11 0 1293.6201 P46779 P46779 23 33 RPL28 60S ribosomal protein L28 yes yes 2 0.0015953 125.68 By MS/MS By matching 9 0 2 1 1 539640 490680 48959 11850 886 12601 29856;29857 21076 21076 1 281610 527640 QVAASTAQLLVACK VQGHASQEKLISSAKQVAASTAQLLVACKV KQVAASTAQLLVACKVKADQDSEAMKRLQA K Q V C K V 4 0 0 0 1 2 0 0 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 0 1458.7864 Q9Y490;Q9Y4G6 Q9Y490 2430 2443 TLN1;TLN2 Talin-1;Talin-2 yes no 2 1.037E-25 241.39 By MS/MS 2.8 0.748 2 2 1 5 1503800 1503800 0 11851 2947 12602;12603 29858;29859;29860;29861;29862 21077;21078 21077 1 58540 0 QVAEAYEVLSDAK DKNPENKEEAERKFKQVAEAYEVLSDAKKR FKQVAEAYEVLSDAKKRDIYDKYGKEGLNG K Q V A K K 3 0 0 1 0 1 2 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 13 0 1421.7038 O75190;Q8WWF6 O75190 48 60 DNAJB6;DNAJB3 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 3 yes no 2 4.4041E-12 239.48 By MS/MS 7.6 0.49 2 3 5 8444900 8444900 0 11852 291 12604;12605 29863;29864;29865;29866;29867 21079;21080;21081;21082;21083 21080 2 449010 0 QVAEQFLNMR RMALIGLGVSHPVLKQVAEQFLNMRGGLGL HPVLKQVAEQFLNMRGGLGLSGAKANYRGG K Q V M R G 1 1 1 0 0 2 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 10 0 1234.6128 P22695 P22695 232 241 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 1.3228E-10 199.46 By MS/MS 7.2 0.4 4 1 5 11568000 11568000 0 11853 662 12606;12607;12608;12609 29868;29869;29870;29871;29872 21084;21085;21086;21087 21084 445 2 206730 0 QVAGTMKLELAQYR SVSRVGSAAQTRAMKQVAGTMKLELAQYRE KQVAGTMKLELAQYREVAAFAQFGSDLDAA K Q V Y R E 2 1 0 0 0 2 1 1 0 0 2 1 1 0 0 0 1 0 1 1 0 0 14 1 1606.8501 P25705 P25705 428 441 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0046336 105.36 By MS/MS By matching 6 0 2 1 1 0 0 0 11854 687 12610 29873;29874 21088 21088 463 0 0 0 QVAQASHSYR QDFHPRLLGLTGSTKQVAQASHSYRVYYNA TGSTKQVAQASHSYRVYYNAGPKDEDQDYI K Q V Y R V 2 1 0 0 0 2 0 0 1 0 0 0 0 0 0 2 0 0 1 1 0 0 10 0 1145.5578 O43819 O43819 197 206 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 7.8814E-07 185.6 By MS/MS 8.33 0.471 2 1 3 2473800 2473800 0 11855 226 12611;12612 29875;29876;29877 21089;21090 21089 1 163190 0 QVAQEQFFLMCTR FIIDLLLHCHSKTVRQVAQEQFFLMCTRCC VRQVAQEQFFLMCTRCCMGHRPLLFFITLL R Q V T R C 1 1 0 0 1 3 1 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 13 0 1656.7752 Q93008 Q93008 1330 1342 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.00097562 126.12 By MS/MS 2.2 0.748 1 2 2 5 921800 921800 0 11856 2096 12613;12614 29878;29879;29880;29881;29882 21091;21092 21091 1377 1 40420 0 QVAQQEAERAR HLTFGKEFTEAVEAKQVAQQEAERARFVVE VEAKQVAQQEAERARFVVEKAEQQKKAAII K Q V A R F 3 2 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 11 1 1284.6535 P35232 P35232 187 197 PHB Prohibitin yes yes 2;3 0.0019919 152.11 By MS/MS By matching 8.2 0.4 4 1 3 2 11996000 11900000 96340 11857 782 12615 29883;29884;29885;29886;29887 21093;21094 21094 2 877030 821900 QVAQQEAQR ELSFSREYTAAVEAKQVAQQEAQRAQFLVE AAVEAKQVAQQEAQRAQFLVEKAKQEQRQK K Q V Q R A 2 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1056.5312 Q99623 Q99623 201 209 PHB2 Prohibitin-2 yes yes 2 4.9968E-06 177.7 By MS/MS By MS/MS 7.8 0.4 1 4 3 2 9853000 9283400 569530 11858 2277 12616;12617 29888;29889;29890;29891;29892 21095;21096;21097;21098 21097 3 606840 4858800 QVAQQEAQRAQFLVEK ELSFSREYTAAVEAKQVAQQEAQRAQFLVE VAQQEAQRAQFLVEKAKQEQRQKIVQAEGE K Q V E K A 3 1 0 0 0 5 2 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 16 1 1871.9854 Q99623 Q99623 201 216 PHB2 Prohibitin-2 yes yes 2 7.3829E-20 217.2 By MS/MS 8 0 2 2 915890 915890 0 11859 2277 12618;12619 29893;29894 21099;21100 21099 1 60421 0 QVAQSEAEKK KAVTHQVKFGQQNPRQVAQSEAEKKLKKDD QQNPRQVAQSEAEKKLKKDDKKKELQELNE R Q V K K L 2 0 0 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 10 1 1116.5775 Q8WU90 Q8WU90 59 68 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 2 0.012048 113.62 By MS/MS 6 0 1 1 392260 392260 0 11860 2013 12620 29895 21101 21101 1 3058.8 0 QVATALQNLQTK RQGKGDSPEARALAKQVATALQNLQTKTNR LAKQVATALQNLQTKTNRAVANSRPAKAAV K Q V T K T 2 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 12 0 1313.7303 P18206 P18206 465 476 VCL Vinculin yes yes 2 6.7383E-33 258.01 By MS/MS 4.5 0.5 1 1 2 1767300 1767300 0 11861 623 12621 29896;29897 21102 21102 1 53343 0 QVCEIIESPLFLK TTGGPPDPSDIHVHKQVCEIIESPLFLKLN HKQVCEIIESPLFLKLNPMTKHTDLPVSVF K Q V L K L 0 0 0 0 1 1 2 0 0 2 2 1 0 1 1 1 0 0 0 1 0 0 13 0 1574.8378 Q7L5N1 Q7L5N1 141 153 COPS6 COP9 signalosome complex subunit 6 yes yes 2 4.336E-18 229 By MS/MS 7.67 0.471 1 2 3 647500 647500 0 11862 1768 12622;12623 29898;29899;29900 21103;21104;21105 21103 1 39128 0 QVCPLDNR HAFHFHCISRWLKTRQVCPLDNREWEFQKY SRWLKTRQVCPLDNREWEFQKYGH______ R Q V N R E 0 1 1 1 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1000.476 P62877 P62877 92 99 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 0.0020118 157.33 By MS/MS 10 0 1 1 1105300 1105300 0 11863 1155 12624 29901 21106 21106 1 1174800 0 QVCPLDNREWEFQK HAFHFHCISRWLKTRQVCPLDNREWEFQKY RQVCPLDNREWEFQKYGH____________ R Q V Q K Y 0 1 1 1 1 2 2 0 0 0 1 1 0 1 1 0 0 1 0 1 0 0 14 1 1847.8625 P62877 P62877 92 105 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 3 0.051518 57.567 By MS/MS 10 0 1 1 491280 491280 0 11864 1155 12625 29902 21107 21107 1 522180 0 QVDLLSAEQMR NLEPLLENYIGDLRRQVDLLSAEQMRQNAE DLRRQVDLLSAEQMRQNAEVRSMQDVVEDY R Q V M R Q 1 1 0 1 0 2 1 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 11 0 1288.6445 CON__Q7Z794;Q7Z794 CON__Q7Z794 225 235 KRT77 Keratin, type II cytoskeletal 1b yes no 2 0.050477 70.412 By MS/MS 1 0 1 1 97996 0 97996 + 11865 63 12626 29903 21108 21108 1 0 97996 QVDVSYIAK PTLDVKIAFCQGFDKQVDVSYIAKHYNMSK CQGFDKQVDVSYIAKHYNMSKSKVDNQFYS K Q V A K H 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 2 0 0 9 0 1021.5444 P53779 P53779 27 35 MAPK10 Mitogen-activated protein kinase 10 yes yes 2 0.010344 104.06 By MS/MS 5.5 0.5 1 1 2 13492000 13492000 0 11866 1007 12627 29904;29905 21109 21109 1 110710 0 QVEDDIQQLLK LLKTYGQSTYSRQIKQVEDDIQQLLKKINE RQIKQVEDDIQQLLKKINELTGIKESDTGL K Q V L K K 0 0 0 2 0 3 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 11 0 1327.6983 P35998 P35998 47 57 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.0010465 120.31 By MS/MS 7 0.707 1 2 1 4 3728300 3728300 0 11867 801 12628;12629 29906;29907;29908;29909 21110;21111;21112 21112 2 66625 0 QVEDGEVFDFR IMSSFVNTMTSLSVKQVEDGEVFDFRGMRL LSVKQVEDGEVFDFRGMRLDWFRLQAYTSV K Q V F R G 0 1 0 2 0 1 2 1 0 0 0 0 0 2 0 0 0 0 0 2 0 0 11 0 1339.6044 Q9Y2A7 Q9Y2A7 474 484 NCKAP1 Nck-associated protein 1 yes yes 2 6.1795E-07 184.71 By MS/MS 3.5 0.5 1 1 2 889930 889930 0 11868 2882 12630 29910;29911 21113 21113 1 24199 0 QVEEIFNLK PVKEDWNVRITKLRKQVEEIFNLKFAQALG ITKLRKQVEEIFNLKFAQALGLTEAVKVPY K Q V L K F 0 0 1 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 1118.5972 P78347 P78347 574 582 GTF2I General transcription factor II-I yes yes 2 0.021125 101.25 By MS/MS 3.5 0.5 1 1 2 2403900 2403900 0 11869 1194 12631 29912;29913 21114;21115 21115 2 62755 0 QVEEKPQR RIKRSAKRPSAAPIKQVEEKPQRAQNISSN PSAAPIKQVEEKPQRAQNISSNANMLRKGP K Q V Q R A 0 1 0 0 0 2 2 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 8 1 1012.5302 Q14008 Q14008 1434 1441 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.055596 127.02 By MS/MS 3 0.816 1 1 1 3 714360 714360 0 11870 1405 12632 29914;29915;29916 21116 21116 1 30397 0 QVEELFER FNFEKWNARITDLRKQVEELFERKYAQAIK RITDLRKQVEELFERKYAQAIKAKGPVTIP K Q V E R K 0 1 0 0 0 1 3 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 1048.5189 P78347 P78347 364 371 GTF2I General transcription factor II-I yes yes 2 0.039775 95.358 By MS/MS 3 0.816 1 1 1 3 2794400 2794400 0 11871 1194 12633 29917;29918;29919 21117 21117 1 75748 0 QVEELFERK FNFEKWNARITDLRKQVEELFERKYAQAIK ITDLRKQVEELFERKYAQAIKAKGPVTIPY K Q V R K Y 0 1 0 0 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 9 1 1176.6139 P78347 P78347 364 372 GTF2I General transcription factor II-I yes yes 2 0.0012982 132.76 By MS/MS 3.5 0.5 1 1 2 0 0 0 11872 1194 12634 29920;29921 21118 21118 0 0 0 QVEEQSAAANEEVLFPFCR KNHEAGTSGCGIDAKQVEEQSAAANEEVLF QSAAANEEVLFPFCREPSYFEIPTKEFQQP K Q V C R E 3 1 1 0 1 2 4 0 0 0 1 0 0 2 1 1 0 0 0 2 0 0 19 0 2223.0266 Q5SW79 Q5SW79 218 236 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.017068 71.558 By MS/MS 2 0 1 1 110140 110140 0 11873 1621 12635 29922 21119 21119 1 5474.5 0 QVELALWDTAGQEDYDR TVFENYVADIEVDGKQVELALWDTAGQEDY ELALWDTAGQEDYDRLRPLSYPDTDVILMC K Q V D R L 2 1 0 3 0 2 2 1 0 0 2 0 0 0 0 0 1 1 1 1 0 0 17 0 2007.9174 P61586;P62745;P08134 P61586 52 68 RHOA;RHOB;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoB;Rho-related GTP-binding protein RhoC no no 2;3 0.0046944 95.205 By MS/MS 9 0 2 2 107700 107700 0 11874 1101;1141;498 12636;12637 29923;29924 21120;21121 21120 1 61813 0 QVELTAQDVK DMENDPVMGTHKSTKQVELTAQDVKDAHWF HKSTKQVELTAQDVKDAHWFYDTPGITKEN K Q V V K D 1 0 0 1 0 2 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1129.5979 Q8NC60 Q8NC60 480 489 NOA1 Nitric oxide-associated protein 1 yes yes 2 0.0053963 114.86 By MS/MS 5 0 1 1 709180 709180 0 11875 1951 12638 29925 21122;21123 21122 2 29150 0 QVENQLQVQLK TLLKERYQEVLDKQRQVENQLQVQLKQLQQ DKQRQVENQLQVQLKQLQQRREEEMKNHQE R Q V L K Q 0 0 1 0 0 4 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1325.7303 Q8ND24 Q8ND24 249 259 RNF214 RING finger protein 214 yes yes 2 1.6137E-10 196.52 By MS/MS 5 0 1 1 1201700 1201700 0 11876 1957 12639 29926 21124 21124 1 49395 0 QVEQLEK IEDLEELDPDFIMAKQVEQLEKEKKELQER DPDFIMAKQVEQLEKEKKELQERLKNQEKK K Q V E K E 0 0 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 872.46035 Q14152 Q14152 673 679 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.010104 153.73 By MS/MS By matching 3.33 0.471 2 1 2 1 4645700 4597000 48715 11877 1409 12640 29927;29928;29929 21125 21125 1 120470 69819 QVEQLEKEK IEDLEELDPDFIMAKQVEQLEKEKKELQER DFIMAKQVEQLEKEKKELQERLKNQEKKID K Q V E K K 0 0 0 0 0 2 3 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1129.5979 Q14152 Q14152 673 681 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.015396 134.05 By MS/MS 2.67 0.471 1 2 3 1003700 1003700 0 11878 1409 12641 29930;29931;29932 21126;21127 21127 2 27249 0 QVEQLEKEKK IEDLEELDPDFIMAKQVEQLEKEKKELQER FIMAKQVEQLEKEKKELQERLKNQEKKIDY K Q V K K E 0 0 0 0 0 2 3 0 0 0 1 3 0 0 0 0 0 0 0 1 0 0 10 2 1257.6929 Q14152 Q14152 673 682 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 1.9985E-09 195.79 By MS/MS By matching 3.14 0.35 6 1 5 2 1175400 1169100 6357.3 11879 1409 12642;12643 29933;29934;29935;29936;29937;29938;29939 21128;21129;21130;21131 21128 1 30724 9111.3 QVEVELLSR ATLEHFYLTSGKQPKQVEVELLSRQSGLSG SGKQPKQVEVELLSRQSGLSGRQVERWFRR K Q V S R Q 0 1 0 0 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 9 0 1071.5924 Q96G23 Q96G23 97 105 CERS2 Ceramide synthase 2 yes yes 2 0.00093256 138.08 By MS/MS By matching 4.2 2.64 2 2 1 1 3 1 9 1 8412300 8355900 56363 11880 2176 12644;12645 29940;29941;29942;29943;29944;29945;29946;29947;29948;29949 21132;21133;21134;21135 21134 2 237550 231380 QVEVINFGDCLVR EKGAVAMAETLKTLRQVEVINFGDCLVRSK LRQVEVINFGDCLVRSKGAVAIADAIRGGL R Q V V R S 0 1 1 1 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 3 0 0 13 0 1547.7766 P46060 P46060 265 277 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 5.2447E-18 228.12 By MS/MS 5.4 1.02 1 2 1 1 5 7384600 7384600 0 11881 876 12646;12647 29950;29951;29952;29953;29954 21136;21137;21138 21136 1 301040 0 QVFEELWK LDLLDSRTISSSAAKQVFEELWKREGKTPG ISSSAAKQVFEELWKREGKTPGQIVSEKQL K Q V W K R 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 8 0 1077.5495 O75879 O75879 470 477 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 0.031446 98.629 By MS/MS 6 0 1 1 2029400 2029400 0 11882 333 12648 29955 21139 21139 1 15825 0 QVFKDSLIR RLITCGTVEEKIYRRQVFKDSLIRQTTGEK EKIYRRQVFKDSLIRQTTGEKKNPFRYFSK R Q V I R Q 0 1 0 1 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 1 0 0 9 1 1104.6291 Q2NKX8 Q2NKX8 598 606 ERCC6L DNA excision repair protein ERCC-6-like yes yes 3 0.053843 46.462 By MS/MS 6 0 1 1 0 0 0 11883 1559 12649 29956 21140 21140 0 0 0 QVFQSLPK RYVLQAMKHMEPQVKQVFQSLPKSAFSGGY HMEPQVKQVFQSLPKSAFSGGYYRGGFEPK K Q V P K S 0 0 0 0 0 2 0 0 0 0 1 1 0 1 1 1 0 0 0 1 0 0 8 0 945.52837 Q96DA6 Q96DA6 35 42 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 2 0.012053 117.04 By MS/MS 10 0 1 1 529690 529690 0 11884 2149 12650 29957 21141 21141 1 563010 0 QVGDIFSNPETVLAK DIFEDAGILCQRVNKQVGDIFSNPETVLAK QVGDIFSNPETVLAKLIQNVFEIKLQSFVK K Q V A K L 1 0 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 0 0 2 0 0 15 0 1616.841 O00471 O00471 260 274 EXOC5 Exocyst complex component 5 yes yes 2 3.118E-07 166.62 By MS/MS 5 0 2 2 1594400 1594400 0 11885 98 12651;12652 29958;29959 21142;21143 21142 1 65535 0 QVGSYKK IVAPGTFEVQIEEVRQVGSYKKGTMTTGHN EVQIEEVRQVGSYKKGTMTTGHNVADLVVI R Q V K K G 0 0 0 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 1 1 0 0 7 1 808.4443 Q12905 Q12905 104 110 ILF2 Interleukin enhancer-binding factor 2 yes yes 2 0.030177 85.265 By MS/MS 7 0 1 1 0 0 0 11886 1314 12653 29960 21144 21144 0 0 0 QVGVGYVDSIQR IGVVGVKMSAVDGQRQVGVGYVDSIQRKLG GQRQVGVGYVDSIQRKLGLCEFPDNDQFSN R Q V Q R K 0 1 0 1 0 2 0 2 0 1 0 0 0 0 0 1 0 0 1 3 0 0 12 0 1319.6834 P43246 P43246 160 171 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.00043306 141.71 By MS/MS 4 0 1 1 4111900 4111900 0 11887 862 12654 29961 21145 21145 1 112250 0 QVHPDTGISSK SRKESYSVYVYKVLKQVHPDTGISSKAMGI KVLKQVHPDTGISSKAMGIMNSFVNDIFER K Q V S K A 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 0 11 0 1167.5884 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899;Q96A08 Q99880 48 58 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 1-A yes no 2;3 0.00020608 143.4 By MS/MS 10 0 2 2 623780 623780 0 11888 267 12655;12656 29962;29963 21146;21147 21147 1 663020 0 QVIGTGSFFPK GTVWHKDCFTCSNCKQVIGTGSFFPKGEDF SNCKQVIGTGSFFPKGEDFYCVTCHETKFA K Q V P K G 0 0 0 0 0 1 0 2 0 1 0 1 0 2 1 1 1 0 0 1 0 0 11 0 1179.6288 Q13642 Q13642 134 144 FHL1 Four and a half LIM domains protein 1 yes yes 2 0.0011866 117.02 By MS/MS 8 0 2 2 1316700 1316700 0 11889 1394 12657;12658 29964;29965 21148;21149 21149 1 86865 0 QVIINLINQK GFQRHFDSQVIIYGKQVIINLINQKGSEKP IIYGKQVIINLINQKGSEKPLEQTFATMVS K Q V Q K G 0 0 2 0 0 2 0 0 0 3 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1181.7132 Q9NTJ5 Q9NTJ5 302 311 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 4.9149E-16 227.71 By MS/MS 4.27 2.14 2 1 1 1 2 2 2 11 4398200 4398200 0 11890 2631 12659;12660 29966;29967;29968;29969;29970;29971;29972;29973;29974;29975;29976 21150;21151;21152;21153;21154;21155;21156;21157;21158 21150 2 68224 0 QVIINLVDQAGR YFCAHFEEQLNIYKKQVIINLVDQAGREKI YKKQVIINLVDQAGREKIIGDAYLKQVLLF K Q V G R E 1 1 1 1 0 2 0 1 0 2 1 0 0 0 0 0 0 0 0 2 0 0 12 0 1324.7463 Q9Y2H2 Q9Y2H2 372 383 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 2 0.0071527 93.442 By MS/MS 3 0 1 1 0 0 0 11891 2886 12661 29977 21159 21159 0 0 0 QVIIQGFR ______________________________ ______________________________ K Q V F R S 0 1 0 0 0 2 0 1 0 2 0 0 0 1 0 0 0 0 0 1 0 0 8 0 959.55525 Q9UQE7 Q9UQE7 5 12 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.038103 79.116 By MS/MS 3 0 1 1 0 0 0 11892 2860 12662 29978 21160 21160 0 0 0 QVILLHTELER RHVLDNSGEWSVTKRQVILLHTELERSLEY VTKRQVILLHTELERSLEYLPLRFGVLTGL R Q V E R S 0 1 0 0 0 1 2 0 1 1 3 0 0 0 0 0 1 0 0 1 0 0 11 0 1349.7667 Q8WVC6 Q8WVC6 188 198 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 1.4987E-10 197.79 By MS/MS 9 0 2 2 1793300 1793300 0 11893 2028 12663;12664 29979;29980 21161;21162 21161 1 1029200 0 QVIQTPLADSLPVSR AGGSQRTISLGAGDRQVIQTPLADSLPVSR QVIQTPLADSLPVSRCSVALLFRQLGITNV R Q V S R C 1 1 0 1 0 2 0 0 0 1 2 0 0 0 2 2 1 0 0 2 0 0 15 0 1622.8992 O95248 O95248 195 209 SBF1 Myotubularin-related protein 5 yes yes 2 0.050288 75.89 By MS/MS 2.5 0.5 1 1 2 0 0 0 11894 379 12665 29981;29982 21163 21163 0 0 0 QVITLLNELK GAVALGHPLGCTGARQVITLLNELKRRGKR CTGARQVITLLNELKRRGKRAYGVVSMCIG R Q V L K R 0 0 1 0 0 1 1 0 0 1 3 1 0 0 0 0 1 0 0 1 0 0 10 0 1169.702 P09110 P09110 386 395 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal yes yes 2 2.0518E-09 195.57 By MS/MS 7.5 0.5 2 2 4 1700300 1700300 0 11895 511 12666;12667 29983;29984;29985;29986 21164;21165 21164 1 36621 0 QVKPYVEEGLHPQIIIR DGTTSVTLLAAEFLKQVKPYVEEGLHPQII KPYVEEGLHPQIIIRAFRTATQLAVNKIKE K Q V I R A 0 1 0 0 0 2 2 1 1 3 1 1 0 0 2 0 0 0 1 2 0 0 17 1 2018.1313 Q99832 Q99832 107 123 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.003716 130.61 By MS/MS 5.64 1.3 1 1 2 5 1 1 11 188480000 188480000 0 11896 2295 12668;12669 29987;29988;29989;29990;29991;29992;29993;29994;29995;29996;29997 21166;21167;21168;21169;21170 21170 2 1475500 0 QVLALELPEALCR RRCVGLSAPQLGVPRQVLALELPEALCREC PRQVLALELPEALCRECPPRQRALRQMEPF R Q V C R E 2 1 0 0 1 1 2 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 13 0 1510.8177 Q9HBH1 Q9HBH1 121 133 PDF Peptide deformylase, mitochondrial yes yes 2 0.00023121 147.28 By MS/MS 9 0 1 1 178610 178610 0 11897 2551 12670 29998 21171 21171 1 102500 0 QVLALQSQLADTK EQQEEEEEARKNLEKQVLALQSQLADTKKK EKQVLALQSQLADTKKKVDDDLGTIESLEE K Q V T K K 2 0 0 1 0 3 0 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 13 0 1413.7827 P35580 P35580 1365 1377 MYH10 Myosin-10 yes yes 2 1.2568E-07 184.87 By MS/MS 2.33 0.471 2 1 3 441720 441720 0 11898 794 12671;12672 29999;30000;30001 21172;21173 21172 1 18067 0 QVLDEALLR GQRFLLPAENNKPQRQVLDEALLRRLHLTP NNKPQRQVLDEALLRRLHLTPSQAAQLPLH R Q V L R R 1 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 9 0 1055.5975 Q6P087 Q6P087 288 296 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 0.036679 87.308 By MS/MS By matching 8.33 0.471 2 1 2 1 2519200 2459700 59501 11899 1697 12673 30002;30003;30004 21174 21174 1 230760 507620 QVLDNLTMEK QNLRQGVDADINGLRQVLDNLTMEKSDLEM INGLRQVLDNLTMEKSDLEMQYETLQEELM R Q V E K S 0 0 1 1 0 1 1 0 0 0 2 1 1 0 0 0 1 0 0 1 0 0 10 0 1189.6013 P35527;CON__P35527 P35527 262 271 KRT9 Keratin, type I cytoskeletal 9 yes no 2 8.5113E-11 204.79 By MS/MS By MS/MS 4.85 2.06 3 3 3 4 3 2 2 4 16 4657400 1166100 3491300 + 11900 791 12674;12675;12676;12677 30005;30006;30007;30008;30009;30010;30011;30012;30013;30014;30015;30016;30017;30018;30019;30020;30021;30022;30023;30024 21175;21176;21177;21178;21179;21180;21181;21182;21183;21184;21185;21186;21187;21188;21189;21190 21178 535 9 38813 7002100 QVLEPSFR LADITVVCTLLWLYKQVLEPSFRQAFPNTN TLLWLYKQVLEPSFRQAFPNTNRWFLTCIN K Q V F R Q 0 1 0 0 0 1 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 8 0 974.51853 P26641 P26641 174 181 EEF1G Elongation factor 1-gamma yes yes 2 0.02209 104.06 By MS/MS 6 0 1 1 49140000 49140000 0 11901 700 12678 30025 21191 21191 1 383200 0 QVLGAPSFR QPRKLPVFKSLRHMRQVLGAPSFRMLAWHV SLRHMRQVLGAPSFRMLAWHVLMGNQVIWK R Q V F R M 1 1 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 9 0 973.53451 Q8NFG4 Q8NFG4 354 362 FLCN Folliculin yes yes 2 0.0070882 98.629 By MS/MS 6.5 0.5 1 1 2 0 0 0 11902 1970 12679 30026;30027 21192;21193 21192 0 0 0 QVLHQLK MDDEENYSAASKAVRQVLHQLKRLGIVWQD SAASKAVRQVLHQLKRLGIVWQDVLPVNIY R Q V L K R 0 0 0 0 0 2 0 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 7 0 864.51814 O43264 O43264 628 634 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 0.039226 88.643 By MS/MS 4 0 1 1 0 0 0 11903 189 12680 30028 21194 21194 0 0 0 QVLKDLVK LTTAVITNKDVRKRRQVLKDLVKVIQQESY KDVRKRRQVLKDLVKVIQQESYTYKDPITE R Q V V K V 0 0 0 1 0 1 0 0 0 0 2 2 0 0 0 0 0 0 0 2 0 0 8 1 941.59097 P60228 P60228 272 279 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.0080489 171.38 By MS/MS By matching 6.75 0.829 2 1 1 3 1 17957000 17931000 26422 11904 1065 12681 30029;30030;30031;30032 21195;21196 21196 2 191860 81034 QVLLEIFSK VFALWESGDMSDQHRQVLLEIFSKNYRVRR MSDQHRQVLLEIFSKNYRVRRNMIQSRLTQ R Q V S K N 0 0 0 0 0 1 1 0 0 1 2 1 0 1 0 1 0 0 0 1 0 0 9 0 1075.6277 Q9NVU0 Q9NVU0 651 659 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 0.01673 98.582 By MS/MS 5.5 0.5 1 1 2 720390 720390 0 11905 2661 12682 30033;30034 21197 21197 1 21804 0 QVLLGDQIPK GVIRLAAIAESGVERQVLLGDQIPKFAVAT SGVERQVLLGDQIPKFAVATLPPA______ R Q V P K F 0 0 0 1 0 2 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 1109.6445 P28072 P28072 221 230 PSMB6 Proteasome subunit beta type-6 yes yes 2 0.00066487 138.4 By MS/MS By matching 9.25 0.433 3 1 3 1 10622000 10565000 57649 11906 714 12683;12684 30035;30036;30037;30038 21198;21199 21198 1 6156700 621290 QVLLSAAEAAEVILR DMAILGITESFQVKRQVLLSAAEAAEVILR QVLLSAAEAAEVILRVDNIIKAAPRKRVPD R Q V L R V 4 1 0 0 0 1 2 0 0 1 3 0 0 0 0 1 0 0 0 2 0 0 15 0 1581.909 P78371 P78371 502 516 CCT2 T-complex protein 1 subunit beta yes yes 2;3 9.1929E-29 286.34 By MS/MS 6 0 3 3 3269000 3269000 0 11907 1195 12685;12686 30039;30040;30041 21200;21201;21202 21200 2 25491 0 QVLNADSVEQSFVGLK DLMLRFLGEKAAAKRQVLNADSVEQSFVGL VLNADSVEQSFVGLKQLISCRNWRAAVDLC R Q V L K Q 1 0 1 1 0 2 1 1 0 0 2 1 0 1 0 2 0 0 0 3 0 0 16 0 1732.8996 Q8WVT3 Q8WVT3 370 385 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 2 2.3776E-07 195.72 By MS/MS 4 0.707 1 2 1 4 731430 731430 0 11908 2034 12687;12688 30042;30043;30044;30045 21203;21204 21203 1 20602 0 QVLNQDLTFQHIK HGSGDSGQGLRMWIKQVLNQDLTFQHIKII IKQVLNQDLTFQHIKIIYPTAPPRSYTPMK K Q V I K I 0 0 1 1 0 3 0 0 1 1 2 1 0 1 0 0 1 0 0 1 0 0 13 0 1582.8467 Q5VWZ2 Q5VWZ2 43 55 LYPLAL1 Lysophospholipase-like protein 1 yes yes 2 4.082E-08 187.42 By MS/MS 9 0.816 1 1 1 3 0 0 0 11909 1656 12689 30046;30047;30048 21205;21206 21205 0 0 0 QVLPDPEVLEAVGDR GLSESETGPMEEVERQVLPDPEVLEAVGDR QVLPDPEVLEAVGDRQDGLREQLQAPVPPD R Q V D R Q 1 1 0 2 0 1 2 1 0 0 2 0 0 0 2 0 0 0 0 3 0 0 15 0 1635.8468 Q96AQ6 Q96AQ6 231 245 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes yes 2 0.0092363 97.957 By MS/MS 4 0 1 1 260020 260020 0 11910 2122 12690 30049 21207 21207 1 7098.4 0 QVLPFLLR REQEAGVLAMDALHRQVLPFLLRRMKEDVL AMDALHRQVLPFLLRRMKEDVLQDLPPKII R Q V L R R 0 1 0 0 0 1 0 0 0 0 3 0 0 1 1 0 0 0 0 1 0 0 8 0 984.61204 O14981 O14981 1495 1502 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.049806 60.788 By MS/MS 6 0 1 1 0 0 0 11911 143 12691 30050 21208 21208 0 0 0 QVLSGSGESVTK EKILQLQEKKKDLAKQVLSGSGESVTKLTL LAKQVLSGSGESVTKLTLADLRVLFGI___ K Q V T K L 0 0 0 0 0 1 1 2 0 0 1 1 0 0 0 3 1 0 0 2 0 0 12 0 1190.6143 Q9UNY4 Q9UNY4 1139 1150 TTF2 Transcription termination factor 2 yes yes 2 0.005 106.16 By MS/MS 3 0 1 1 613270 613270 0 11912 2848 12692 30051 21209 21209 1 16009 0 QVLVAPGNAGTACSEK EHTLAWKLAQSHHVKQVLVAPGNAGTACSE VLVAPGNAGTACSEKISNTAISISDHTALA K Q V E K I 3 0 1 0 1 1 1 2 0 0 1 1 0 0 1 1 1 0 0 2 0 0 16 0 1600.7879 P22102 P22102 29 44 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 2 0.00043283 124.47 By MS/MS 5 0.816 1 1 1 3 2900500 2900500 0 11913 655 12693 30052;30053;30054 21210 21210 1 89484 0 QVNITVQK LDLVKPEPVYKLTQRQVNITVQKKVSQWWE VYKLTQRQVNITVQKKVSQWWERLTKQEKR R Q V Q K K 0 0 1 0 0 2 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 8 0 928.53418 Q9P035 Q9P035 77 84 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.005704 134.48 By MS/MS By matching 1.33 0.471 2 1 2 1 5013700 4990900 22808 11914 2723 12694 30055;30056;30057 21211;21212 21212 2 245370 22808 QVNITVQKK LDLVKPEPVYKLTQRQVNITVQKKVSQWWE YKLTQRQVNITVQKKVSQWWERLTKQEKRP R Q V K K V 0 0 1 0 0 2 0 0 0 1 0 2 0 0 0 0 1 0 0 2 0 0 9 1 1056.6291 Q9P035 Q9P035 77 85 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.0010162 136.8 By MS/MS 1 0 1 1 0 0 0 11915 2723 12695 30058 21213 21213 0 0 0 QVPCFASMLTKK RRVDFCKDPSAIGKKQVPCFASMLTKKLHF GKKQVPCFASMLTKKLHFFPKSN_______ K Q V K K L 1 0 0 0 1 1 0 0 0 0 1 2 1 1 1 1 1 0 0 1 0 0 12 1 1408.7207 P55212 P55212 274 285 CASP6 Caspase-6;Caspase-6 subunit p18;Caspase-6 subunit p11 yes yes 2 0.0013515 123.86 By MS/MS 1 0 1 1 77198 0 77198 11916 1031 12696 30059 21214 21214 805 0 0 77198 QVPDKPMKSIK NSGAVRPFYASENLRQVPDKPMKSIKYMDK ENLRQVPDKPMKSIKYMDKEIINLKKDLIR R Q V I K Y 0 0 0 1 0 1 0 0 0 1 0 3 1 0 2 1 0 0 0 1 0 0 11 2 1269.7115 Q8IWA6 Q8IWA6 30 40 CCDC60 Coiled-coil domain-containing protein 60 yes yes 2 0.018763 70.056 By MS/MS 5 0 1 1 0 0 0 11917 1862 12697 30060 21215 21215 1280 0 0 0 QVPGGGGGGGSGGGGGSGGGGSGGGR ______________________________ GGGGGSGGGGSGGGRGAGGEENKENERPSA K Q V G R G 0 1 0 0 0 1 0 19 0 0 0 0 0 0 1 3 0 0 0 1 0 0 26 0 1842.7953 Q9UHB9 Q9UHB9 6 31 SRP68 Signal recognition particle subunit SRP68 yes yes 2 1.0827E-19 163.11 By MS/MS 5 0 1 1 928420 928420 0 11918 2779 12698 30061 21216 21216 1 38162 0 QVPNESFFNFFNPLK KQKHKGRGTVRTITKQVPNESFFNFFNPLK QVPNESFFNFFNPLKASGDGESLDEDSEFT K Q V L K A 0 0 3 0 0 1 1 0 0 0 1 1 0 4 2 1 0 0 0 1 0 0 15 0 1826.8992 Q99733 Q99733 283 297 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 2 0.014039 74.698 By MS/MS 6 0 2 2 237710 237710 0 11919 2288 12699;12700 30062;30063 21217;21218 21218 1 1853.7 0 QVQADFITLGLSEEK LLVPNGALKKSLTAKQVQADFITLGLSEEK QVQADFITLGLSEEKATYFSEKWKQNAPTL K Q V E K A 1 0 0 1 0 2 2 1 0 1 2 1 0 1 0 1 1 0 0 1 0 0 15 0 1676.8621 Q86VX2 Q86VX2 91 105 COMMD7 COMM domain-containing protein 7 yes yes 2 0.00022554 162.48 By MS/MS 9 0 1 1 266500 266500 0 11920 1833 12701 30064 21219 21219 1 152950 0 QVQGSEISSIDEFCR AACSRLLVQYKAAFRQVQGSEISSIDEFCR QVQGSEISSIDEFCRKFRLDCPLAMERIKE R Q V C R K 0 1 0 1 1 2 2 1 0 2 0 0 0 1 0 3 0 0 0 1 0 0 15 0 1753.7941 Q9UK41 Q9UK41 83 97 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 2 0.00030057 130.1 By MS/MS 9 0 1 1 230690 230690 0 11921 2807 12702 30065 21220 21220 1 132390 0 QVQHILASASPSGR KTQPPEDISCIAWNRQVQHILASASPSGRA RQVQHILASASPSGRATVWDLRKNEPIIKV R Q V G R A 2 1 0 0 0 2 0 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 14 0 1449.7688 O94979 O94979 179 192 SEC31A Protein transport protein Sec31A yes yes 2 0.00041994 134.18 By MS/MS 3 0 1 1 0 0 0 11922 362 12703 30066 21221 21221 0 0 0 QVQPEGPYR DSIHSLAAYYIDCIRQVQPEGPYRVAGYSY YIDCIRQVQPEGPYRVAGYSYGACVAFEMC R Q V Y R V 0 1 0 0 0 2 1 1 0 0 0 0 0 0 2 0 0 0 1 1 0 0 9 0 1072.5302 P49327 P49327 2295 2303 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00053217 152.63 By MS/MS 2.17 1.07 2 2 1 1 6 30776000 30776000 0 11923 915 12704;12705 30067;30068;30069;30070;30071;30072 21222;21223;21224;21225 21223 3 1313100 0 QVRPVTEK GVKEKFTMVQVWPVRQVRPVTEKLPANHPL VQVWPVRQVRPVTEKLPANHPLLTGQRVLD R Q V E K L 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 2 0 0 8 1 955.54508 P38606 P38606 213 220 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 0.021729 150.4 By MS/MS 5 0 1 1 448270 448270 0 11924 819 12706 30073 21226 21226 1 18426 0 QVSCMAHRGEVPAMLPLK HAPFGLGAHFTVPLKQVSCMAHRGEVPAML CMAHRGEVPAMLPLKVKGRRFYFLLDKTGH K Q V L K V 2 1 0 0 1 1 1 1 1 0 2 1 2 0 2 1 0 0 0 2 0 0 18 1 2023.0165 A0PJW6 A0PJW6 153 170 TMEM223 Transmembrane protein 223 yes yes 2 0.041581 40.113 By MS/MS 5.5 0.5 1 1 2 0 0 0 11925 7 12707 30074;30075 21227 21227 0 0 0 QVSDDLTER FDAGELITQRELVSRQVSDDLTERAATFGL RELVSRQVSDDLTERAATFGLILDDVSLTH R Q V E R A 0 1 0 2 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1061.4989 P35232 P35232 149 157 PHB Prohibitin yes yes 2 0.00028914 154.85 By MS/MS By MS/MS 8.6 0.8 3 1 1 4 1 36999000 36403000 595310 11926 782 12708;12709 30076;30077;30078;30079;30080 21228;21229;21230;21231;21232 21232 4 3113600 5078700 QVSDLISVLR KTGTAYTFFTPNNIKQVSDLISVLREANQA PNNIKQVSDLISVLREANQAINPKLLQLVE K Q V L R E 0 1 0 1 0 1 0 0 0 1 2 0 0 0 0 2 0 0 0 2 0 0 10 0 1128.6503 P17844 P17844 452 461 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.0010441 115.78 By MS/MS 5.33 0.471 2 1 3 1091000 1091000 0 11927 616 12710;12711 30081;30082;30083 21233;21234 21234 1 44843 0 QVSDVQKR ATLQKSTKEVRSSIRQVSDVQKRVQVDVKM EVRSSIRQVSDVQKRVQVDVKMAILQIMKE R Q V K R V 0 1 0 1 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 2 0 0 8 1 958.51959 Q13263 Q13263 283 290 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 0.0013868 162.25 By MS/MS By matching 4.4 1.14 1 1 7 4 1 1 13 2 7715900 7711400 4537.7 11928 1351 12712;12713 30084;30085;30086;30087;30088;30089;30090;30091;30092;30093;30094;30095;30096;30097;30098 21235;21236;21237;21238;21239;21240 21238 2 207170 9481.9 QVSGLTVDTEER ILNKLTPQMFNQLMKQVSGLTVDTEERLKG LMKQVSGLTVDTEERLKGVIDLVFEKAIDE K Q V E R L 0 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 2 0 0 2 0 0 12 0 1332.6521 O43432 O43432 776 787 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00090685 134.38 By MS/MS 2.5 0.5 1 1 2 1570000 1570000 0 11929 200 12714 30099;30100 21241 21241 1 71214 0 QVSTEEAQAWCR FPFVILGNKIDISERQVSTEEAQAWCRDNG SERQVSTEEAQAWCRDNGDYPYFETSAKDA R Q V C R D 2 1 0 0 1 2 2 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 12 0 1463.6463 P51151 P51151 132 143 RAB9A Ras-related protein Rab-9A yes yes 2 0.00030485 147.73 By MS/MS 9 0 1 1 735180 735180 0 11930 961 12715 30101 21242 21242 1 421930 0 QVTAAQLHLRDPVAIVK QKVYSSHTGYPGGFRQVTAAQLHLRDPVAI TAAQLHLRDPVAIVKLAIYGMLPKNLHRRT R Q V V K L 3 1 0 1 0 2 0 0 1 1 2 1 0 0 1 0 1 0 0 3 0 0 17 1 1858.0789 Q9BYD1 Q9BYD1 89 105 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 3 0.035374 55.011 By MS/MS 9 0 1 1 0 0 0 11931 2412 12716 30102 21243 21243 0 0 0 QVTDAETKPK EMDDTEHPEDGIFIRQVTDAETKPKSPCT_ GIFIRQVTDAETKPKSPCT___________ R Q V P K S 1 0 0 1 0 1 1 0 0 0 0 2 0 0 1 0 2 0 0 1 0 0 10 1 1115.5823 O43684 O43684 315 324 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 6.2459E-06 187.99 By MS/MS 7.67 0.471 1 2 3 0 0 0 11932 216 12717;12718 30103;30104;30105 21244;21245 21245 1 0 0 QVTGQPQNASFVK LKSELGNQSPSTSSRQVTGQPQNASFVKRN SRQVTGQPQNASFVKRNRWWLLPLIAALAS R Q V V K R 1 0 1 0 0 3 0 1 0 0 0 1 0 1 1 1 1 0 0 2 0 0 13 0 1402.7205 Q5JTV8 Q5JTV8 322 334 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 2.3156E-08 193.62 By MS/MS 6 0.816 1 1 1 3 7015500 7015500 0 11933 1610 12719 30106;30107;30108 21246 21246 1 62812 0 QVTQEEGQQLAR PMILIGNKADLDHQRQVTQEEGQQLARQLK HQRQVTQEEGQQLARQLKVTYMEASAKIRM R Q V A R Q 1 1 0 0 0 4 2 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 12 0 1385.6899 P62070 P62070 136 147 RRAS2 Ras-related protein R-Ras2 yes yes 2 2.4179E-24 247.96 By MS/MS 9.5 0.5 1 1 2 524420 524420 0 11934 1112 12720 30109;30110 21247 21247 1 313240 0 QVTQLAIDTEER ILNKLTPQMFQQLMKQVTQLAIDTEERLKG LMKQVTQLAIDTEERLKGVIDLIFEKAISE K Q V E R L 1 1 0 1 0 2 2 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1401.71 Q04637 Q04637 782 793 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 4.6236E-56 293.71 By MS/MS 2.58 1.04 2 4 3 3 12 37363000 37363000 0 11935 1264 12721;12722 30111;30112;30113;30114;30115;30116;30117;30118;30119;30120;30121;30122 21248;21249;21250;21251;21252;21253;21254;21255;21256;21257;21258 21250 7 1557400 0 QVTQLAIDTEERLK ILNKLTPQMFQQLMKQVTQLAIDTEERLKG KQVTQLAIDTEERLKGVIDLIFEKAISEPN K Q V L K G 1 1 0 1 0 2 2 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 14 1 1642.889 Q04637 Q04637 782 795 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0081883 133.05 By MS/MS 3 0.816 1 1 1 3 0 0 0 11936 1264 12723 30123;30124;30125 21259;21260 21259 0 0 0 QVTTAENLK EITCETFNDFVRLFKQVTTAENLKDQTVYI FVRLFKQVTTAENLKDQTVYIVLDKAEYLR K Q V L K D 1 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 9 0 1002.5346 O43913 O43913 108 116 ORC5 Origin recognition complex subunit 5 yes yes 2 0.043374 63.419 By MS/MS 8 0 1 1 0 0 0 11937 233 12724 30126 21261 21261 0 0 0 QVVAVTGDGTNDGPALK TLVKGIIDSTVSDQRQVVAVTGDGTNDGPA VAVTGDGTNDGPALKKADVGFAMGIAGTDV R Q V L K K 2 0 1 2 0 1 0 3 0 0 1 1 0 0 1 0 2 0 0 3 0 0 17 0 1640.837 P20020;P23634;Q16720;Q01814 P20020 790 806 ATP2B1;ATP2B4;ATP2B3;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 4;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 2 yes no 2 1.2521E-82 310.68 By MS/MS 2 0.816 1 1 1 3 1818300 1818300 0 11938 637 12725 30127;30128;30129 21262;21263;21264 21262 3 67269 0 QVVDCQLADVNNIGK GDRVWRMPLFEHYTRQVVDCQLADVNNIGK QVVDCQLADVNNIGKYRSAGACTAAAFLKE R Q V G K Y 1 0 2 2 1 2 0 1 0 1 1 1 0 0 0 0 0 0 0 3 0 0 15 0 1671.825 P28838 P28838 441 455 LAP3 Cytosol aminopeptidase yes yes 2 3.4286E-10 220.53 By MS/MS 6 0 1 1 5696900 5696900 0 11939 722 12726 30130 21265 21265 1 44425 0 QVVEEPSPQLPADR RFPYESWGTPFQQLKQVVEEPSPQLPADRF KQVVEEPSPQLPADRFSPEFVDFTAQCLRK K Q V D R F 1 1 0 1 0 2 2 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 14 0 1563.7893 P46734 P46734 280 293 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 2 8.8929E-05 149.49 By MS/MS 7 0 1 1 759600 759600 0 11940 882 12727 30131 21266 21266 1 13574 0 QVVESAYEVIK LGTDKDKEQWKEVHKQVVESAYEVIKLKGY EVHKQVVESAYEVIKLKGYTSWAIGLSVAD K Q V I K L 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 1 3 0 0 11 0 1263.6711 P00338 P00338 233 243 LDHA L-lactate dehydrogenase A chain yes yes 2 0.0015224 142.36 By MS/MS 8 0 2 2 6782600 6782600 0 11941 424 12728;12729 30132;30133 21267;21268 21267 1 447450 0 QVVILSQDSFYR IVQLLGQNEVDYRQKQVVILSQDSFYRVLT RQKQVVILSQDSFYRVLTSEQKAKALKGQF K Q V Y R V 0 1 0 1 0 2 0 0 0 1 1 0 0 1 0 2 0 0 1 2 0 0 12 0 1453.7565 Q9BZX2 Q9BZX2 55 66 UCK2 Uridine-cytidine kinase 2 yes yes 2 2.8339E-11 208.56 By MS/MS 8 0 2 2 2463100 2463100 0 11942 2428 12730;12731 30134;30135 21269;21270 21269 1 162490 0 QVVNIPSFIVR HARVLIRQRHIRVRKQVVNIPSFIVRLDSQ RVRKQVVNIPSFIVRLDSQKHIDFSLRSPY K Q V V R L 0 1 1 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 0 3 0 0 11 0 1270.7398 P46781 P46781 140 150 RPS9 40S ribosomal protein S9 yes yes 2 0.00032846 149.72 By MS/MS 8.8 0.748 2 2 1 5 850940 850940 0 11943 887 12732;12733 30136;30137;30138;30139;30140 21271;21272;21273;21274 21274 1 426150 0 QVVPFVYQTIVK INQNGEVRLEKQWSKQVVPFVYQTIVKDIR WSKQVVPFVYQTIVKDIRAFDSRFSNIKTL K Q V V K D 0 0 0 0 0 2 0 0 0 1 0 1 0 1 1 0 1 0 1 4 0 0 12 0 1419.8126 Q8IZH2 Q8IZH2 823 834 XRN1 5-3 exoribonuclease 1 yes yes 2 0.022694 73.499 By MS/MS 2.5 0.5 1 1 2 0 0 0 11944 1887 12734 30141;30142 21275 21275 0 0 0 QVVQGLLSETYLEAHR SVTGIFLPILRTGFRQVVQGLLSETYLEAH VVQGLLSETYLEAHRIVKMNKSEDDESGAG R Q V H R I 1 1 0 0 0 2 2 1 1 0 3 0 0 0 0 1 1 0 1 2 0 0 16 0 1841.9636 P33993 P33993 287 302 MCM7 DNA replication licensing factor MCM7 yes yes 2;3 1.5643E-10 183.06 By MS/MS 5.5 0.5 2 2 4 6456200 6456200 0 11945 775 12735;12736 30143;30144;30145;30146 21276;21277;21278;21279 21278 2 79798 0 QVVQTPNTVLSTPFR TPLHESDFSGVTPQRQVVQTPNTVLSTPFR QVVQTPNTVLSTPFRTPSNGAEGLTPRSGT R Q V F R T 0 1 1 0 0 2 0 0 0 0 1 0 0 1 2 1 3 0 0 3 0 0 15 0 1685.9101 Q99459 Q99459 400 414 CDC5L Cell division cycle 5-like protein yes yes 2 1.1089E-06 155.88 By MS/MS 4.5 0.5 1 1 2 0 0 0 11946 2267 12737 30147;30148 21280;21281 21280 0 0 0 QVWGEVPEPSDR WCYLREESEADQWLRQVWGEVPEPSDRSEE WLRQVWGEVPEPSDRSEEPETPAAYRART_ R Q V D R S 0 1 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 1 0 2 0 0 12 0 1397.6575 Q4G0I0 Q4G0I0 107 118 CCSMST1 Protein CCSMST1 yes yes 2 0.014805 91.658 By MS/MS 10 0 1 1 102210 102210 0 11947 1576 12738 30149 21282 21282 1 108640 0 QWFINITDIK YDWRTKKPVVIRASKQWFINITDIKTAAKE IRASKQWFINITDIKTAAKELLKKVKFIPG K Q W I K T 0 0 1 1 0 1 0 0 0 3 0 1 0 1 0 0 1 1 0 0 0 0 10 0 1276.6816 Q9NSE4 Q9NSE4 480 489 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00011501 163.94 By MS/MS 4.75 0.829 2 1 1 4 933450 933450 0 11948 2624 12739;12740 30150;30151;30152;30153 21283;21284 21283 1 21069 0 QWLQEIDR VVYDVTDQESYANVKQWLQEIDRYASENVN ESYANVKQWLQEIDRYASENVNKLLVGNKS K Q W D R Y 0 1 0 1 0 2 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 8 0 1086.5458 P62820;Q9H0U4;Q92928 Q9H0U4 101 108 RAB1A;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 2 0.022034 90.657 By MS/MS 9 0 1 1 0 0 0 11949 1145;2459 12741 30154 21285 21285 0 0 0 QWTPLIILANSR DKKTDYEVLASKLGKQWTPLIILANSRSGT LGKQWTPLIILANSRSGTNMGEGLLGEFRI K Q W S R S 1 1 1 0 0 1 0 0 0 2 2 0 0 0 1 1 1 1 0 0 0 0 12 0 1410.7983 P52429 P52429 216 227 DGKE Diacylglycerol kinase epsilon yes yes 2 0.018444 76.522 By MS/MS 6 0 1 1 0 0 0 11950 985 12742 30155 21286 21286 0 0 0 QWVDTDDTSSENTVVPPETYVK VYKIDDMTAAPMDVRQWVDTDDTSSENTVV TSSENTVVPPETYVKVAGHLRSFQNKKSLV R Q W V K V 0 0 1 3 0 1 2 0 0 0 0 1 0 0 2 2 4 1 1 4 0 0 22 0 2509.1496 P15927 P15927 106 127 RPA2 Replication protein A 32 kDa subunit yes yes 2 0.00049792 87.519 By MS/MS 8 0 1 1 854600 854600 0 11951 604 12743 30156 21287 21287 1 56378 0 QYAGFSTVEESNK GPYPTMYTFRPWTIRQYAGFSTVEESNKFY IRQYAGFSTVEESNKFYKDNIKAGQQGLSV R Q Y N K F 1 0 1 0 0 1 2 1 0 0 0 1 0 1 0 2 1 0 1 1 0 0 13 0 1458.6627 P22033 P22033 109 121 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 2 0.00092365 160.67 By MS/MS 5 0 1 1 1024900 1024900 0 11952 653 12744 30157 21288 21288 1 42127 0 QYAGLDHELAFSR QSFVFQREEIAQLARQYAGLDHELAFSRLI ARQYAGLDHELAFSRLIVELRRLHPGHVLP R Q Y S R L 2 1 0 1 0 1 1 1 1 0 2 0 0 1 0 1 0 0 1 0 0 0 13 0 1505.7263 Q99720 Q99720 48 60 SIGMAR1 Sigma non-opioid intracellular receptor 1 yes yes 2 2.9225E-05 166.11 By MS/MS 8 0 2 2 3070100 3070100 0 11953 2286 12745;12746 30158;30159 21289;21290 21289 1 202530 0 QYAGTGALK IYKNAWADNANACAKQYAGTGALKTDFTRT ANACAKQYAGTGALKTDFTRTGKRTHLGLI K Q Y L K T 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 0 1 0 1 0 0 0 9 0 907.47633 Q9NTJ5 Q9NTJ5 448 456 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.031261 90.37 By MS/MS 1 0 1 1 719090 719090 0 11954 2631 12747 30160 21291 21291 1 35133 0 QYAGTGALKTDFTR IYKNAWADNANACAKQYAGTGALKTDFTRT KQYAGTGALKTDFTRTGKRTHLGLIMDGWN K Q Y T R T 2 1 0 1 0 1 0 2 0 0 1 1 0 1 0 0 3 0 1 0 0 0 14 1 1527.7682 Q9NTJ5 Q9NTJ5 448 461 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.013043 127.52 By MS/MS 1 0 1 1 0 0 0 11955 2631 12748 30161 21292 21292 0 0 0 QYAGYDYSQQGR QQSYDYGGSGGPYSKQYAGYDYSQQGRFVP YSKQYAGYDYSQQGRFVPPDMMQPQQPYTG K Q Y G R F 1 1 0 1 0 3 0 2 0 0 0 0 0 0 0 1 0 0 3 0 0 0 12 0 1434.6164 Q969M3 Q969M3 38 49 YIPF5 Protein YIPF5 yes yes 2 1.8255E-11 210.64 By MS/MS 2 0.816 1 1 1 3 1120700 1120700 0 11956 2104 12749 30162;30163;30164 21293;21294 21293 2 47548 0 QYASYEFVQR DALLNQLKSFPARLRQYASYEFVQRLLKGY PARLRQYASYEFVQRLLKGYMKINMLVIEL R Q Y Q R L 1 1 0 0 0 2 1 0 0 0 0 0 0 1 0 1 0 0 2 1 0 0 10 0 1289.6041 Q14204 Q14204 1379 1388 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 9.5893E-07 183.43 By MS/MS 1.5 0.5 1 1 2 1436000 1436000 0 11957 1421 12750 30165;30166 21295;21296 21295 2 70367 0 QYDGIFYEFR TLAPQMCSSFATGPRQYDGIFYEFRSYYLK ATGPRQYDGIFYEFRSYYLKPSKMNEFLEN R Q Y F R S 0 1 0 1 0 1 1 1 0 1 0 0 0 2 0 0 0 0 2 0 0 0 10 0 1336.6088 Q9UFN0 Q9UFN0 31 40 NIPSNAP3A Protein NipSnap homolog 3A yes yes 2 0.017199 94.309 By MS/MS 8.5 0.5 1 1 2 249420 249420 0 11958 2768 12751 30167;30168 21297 21297 1 29837 0 QYDQEIENLEK QIFRRFEQEMMSKKRQYDQEIENLEKQQKQ SKKRQYDQEIENLEKQQKQTIERLEQEHTN R Q Y E K Q 0 0 1 1 0 2 3 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 11 0 1407.6518 Q9H2G2 Q9H2G2 873 883 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.00010857 160.53 By MS/MS 2 0 1 1 655130 655130 0 11959 2476 12752 30169 21298 21298 1 32563 0 QYEQQTYQVIPEVIK DMHTGDPKQDLAYERQYEQQTYQVIPEVIK QYEQQTYQVIPEVIKNFIQYFHKTVSDLID R Q Y I K N 0 0 0 0 0 4 2 0 0 2 0 1 0 0 1 0 1 0 2 2 0 0 15 0 1864.9571 Q9Y262 Q9Y262 39 53 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 3.0214E-38 299.69 By MS/MS 5.5 0.957 1 2 2 1 6 7004200 7004200 0 11960 2868 12753;12754 30170;30171;30172;30173;30174;30175 21299;21300;21301 21300 2 150960 0 QYFHQLEK SMSDSEVQAKEEHLRQYFHQLEKMNVKIPE AKEEHLRQYFHQLEKMNVKIPENIYRGIRN R Q Y E K M 0 0 0 0 0 2 1 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 8 0 1091.54 P42704 P42704 606 613 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.0087528 120.87 By MS/MS By matching 3.5 0.707 5 2 1 7 1 16209000 16209000 0 11961 854 12755;12756 30176;30177;30178;30179;30180;30181;30182;30183 21302;21303;21304;21305;21306;21307 21304 1 424480 0 QYGDESTLAFQQAR LGRQTDFGMYDYFTRQYGDESTLAFQQARY RQYGDESTLAFQQARYNFIRSMAAYSLLLF R Q Y A R Y 2 1 0 1 0 3 1 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 14 0 1612.7481 P42356;A4QPH2 P42356 1923 1936 PI4KA;PI4KAP2 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2 yes no 2 0.023424 89.561 By MS/MS 2.5 0.5 1 1 2 430230 430230 0 11962 850 12757 30184;30185 21308 21308 1 17937 0 QYGLGAQEEDAFVR ILRLFDDLAMFVYTKQYGLGAQEEDAFVRC KQYGLGAQEEDAFVRCVSVLGNLADQLYYP K Q Y V R C 2 1 0 1 0 2 2 2 0 0 1 0 0 1 0 0 0 0 1 1 0 0 14 0 1581.7423 Q96HA9 Q96HA9 77 90 PEX11G Peroxisomal membrane protein 11C yes yes 2 2.2031E-05 159.44 By MS/MS 9 0 1 1 253690 253690 0 11963 2189 12758 30186 21309 21309 1 145600 0 QYGNEVFLAK IDEVSSLLRTSIMSKQYGNEVFLAKLIAQA SIMSKQYGNEVFLAKLIAQACVSIFPDSGH K Q Y A K L 1 0 1 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 0 0 10 0 1167.5924 P50990 P50990 172 181 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00023025 143.37 By MS/MS 5.06 2.11 1 1 2 2 3 3 2 1 1 16 347560000 347560000 0 11964 955 12759;12760 30187;30188;30189;30190;30191;30192;30193;30194;30195;30196;30197;30198;30199;30200;30201;30202 21310;21311;21312;21313;21314;21315;21316 21315 5 4272100 0 QYGPNVPEPILQK AVDNPKPHSELEMLRQYGPNVPEPILQKLV LRQYGPNVPEPILQKLVAAFGELRSLADQG R Q Y Q K L 0 0 1 0 0 2 1 1 0 1 1 1 0 0 3 0 0 0 1 1 0 0 13 0 1481.7878 A3KMH1 A3KMH1 942 954 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 9.6596E-12 203.02 By MS/MS 3 0.816 1 1 1 3 2543200 2543200 0 11965 13 12761 30203;30204;30205 21317;21318;21319 21318 3 88092 0 QYIATIHSR ERDDMIHQLPLLTEKQYIATIHSRLQDSQL PLLTEKQYIATIHSRLQDSQLWKLPGLQAT K Q Y S R L 1 1 0 0 0 1 0 0 1 2 0 0 0 0 0 1 1 0 1 0 0 0 9 0 1087.5774 Q92621 Q92621 305 313 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.044905 70.056 By MS/MS 1.5 0.5 1 1 2 0 0 0 11966 2070 12762 30206;30207 21320 21320 0 0 0 QYIGPPSAAAIFK TEKIDVAFVDRADIKQYIGPPSAAAIFKIY IKQYIGPPSAAAIFKIYLSCLEELMKCQII K Q Y F K I 3 0 0 0 0 1 0 1 0 2 0 1 0 1 2 1 0 0 1 0 0 0 13 0 1361.7343 Q15645 Q15645 317 329 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 2 0.01447 77.674 By MS/MS 7 0 1 1 0 0 0 11967 1512 12763 30208 21321 21321 0 0 0 QYKDVAKPVIELYK QQEDDKPEAVAARLRQYKDVAKPVIELYKS RQYKDVAKPVIELYKSRGVLHQFSGTETNK R Q Y Y K S 1 0 0 1 0 1 1 0 0 1 1 3 0 0 1 0 0 0 2 2 0 0 14 2 1692.9451 P27144 P27144 173 186 AK4 Adenylate kinase 4, mitochondrial yes yes 3 0.016487 64.842 By MS/MS 8 0 1 1 0 0 0 11968 702 12764 30209 21322 21322 0 0 0 QYLFSLYECR GAEILEVLHSLPAVRQYLFSLYECRYSVFF LPAVRQYLFSLYECRYSVFFQSLAVVEQEM R Q Y C R Y 0 1 0 0 1 1 1 0 0 0 2 0 0 1 0 1 0 0 2 0 0 0 10 0 1377.6387 Q15008 Q15008 258 267 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.00036462 150.27 By MS/MS 7 0 1 1 1267300 1267300 0 11969 1460 12765 30210 21323 21323 1 22648 0 QYLLCPGSSGVENTELVK LHYYGLRDSRSEHERQYLLCPGSSGVENTE LCPGSSGVENTELVKSPSEYLMMLMPPSQE R Q Y V K S 0 0 1 0 1 1 2 2 0 0 3 1 0 0 1 2 1 0 1 2 0 0 18 0 1992.9826 Q9NVU0 Q9NVU0 223 240 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 2 6.1404E-14 183 By MS/MS 5.5 0.5 1 1 2 1358400 1358400 0 11970 2661 12766 30211;30212 21324 21324 1 41397 0 QYLLLHSLK YLPFVLQEITSQPKRQYLLLHSLKEIISSA TSQPKRQYLLLHSLKEIISSASVVGLKPYV R Q Y L K E 0 0 0 0 0 1 0 0 1 0 4 1 0 0 0 1 0 0 1 0 0 0 9 0 1113.6546 Q86VP6 Q86VP6 906 914 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.00081463 130.75 By MS/MS 3.5 0.5 1 1 2 0 0 0 11971 1829 12767 30213;30214 21325 21325 0 0 0 QYPISLVLAPTR ALRAMKENGRYGRRKQYPISLVLAPTRELA RRKQYPISLVLAPTRELAVQIYEEARKFSY K Q Y T R E 1 1 0 0 0 1 0 0 0 1 2 0 0 0 2 1 1 0 1 1 0 0 12 0 1356.7765 O00571;O15523 O00571 265 276 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.002861 116.77 By MS/MS 5.14 1.25 1 1 2 2 1 7 6083400 6083400 0 11972 105 12768;12769 30215;30216;30217;30218;30219;30220;30221 21326;21327;21328 21326 2 191330 0 QYPYNNLYLER WVGDVYPVYQPVGPKQYPYNNLYLERGGDP VGPKQYPYNNLYLERGGDPSKEPERVVHYE K Q Y E R G 0 1 2 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 3 0 0 0 11 0 1471.7096 O95169 O95169 160 170 NDUFB8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial yes yes 2 0.0012892 116.23 By MS/MS 9 0 2 2 1374000 1374000 0 11973 371 12770;12771 30222;30223 21329;21330 21330 1 788550 0 QYQIDAAIVR VEEQASTTERVFQDRQYQIDAAIVRIMKMR VFQDRQYQIDAAIVRIMKMRKTLSHNLLVS R Q Y V R I 2 1 0 1 0 2 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 10 0 1175.6299 Q13620;Q13619 Q13620 847 856 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 3.8517E-05 172.59 By MS/MS 4.5 0.5 1 1 2 4925100 4925100 0 11974 1390 12772 30224;30225 21331;21332 21331 2 171710 0 QYQLLFTQGSGENK SPFMNKFFPASFPNRQYQLLFTQGSGENKE RQYQLLFTQGSGENKEEIINYEFDTKDLVC R Q Y N K E 0 0 1 0 0 3 1 2 0 0 2 1 0 1 0 1 1 0 1 0 0 0 14 0 1611.7893 Q8TCT9 Q8TCT9 137 150 HM13 Minor histocompatibility antigen H13 yes yes 2 8.0937E-05 150.51 By MS/MS 2.5 0.5 1 1 2 259620 259620 0 11975 1997 12773 30226;30227 21333 21333 1 9897.4 0 QYWEELGAPEALR LLASDAEVPEPCLPRQYWEELGAPEALREQ PRQYWEELGAPEALREQPWPLPVQMELGKL R Q Y L R E 2 1 0 0 0 1 3 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 13 0 1560.7573 O00411 O00411 551 563 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 1.471E-11 197.07 By MS/MS 3.5 0.5 2 2 4 2507300 2507300 0 11976 92 12774;12775 30228;30229;30230;30231 21334;21335;21336 21334 2 65951 0 RAACDLVR YIRRDLEGSDIDTRRRAACDLVRGLCKFFE SDIDTRRRAACDLVRGLCKFFEGPVTGIFS R R A V R G 2 2 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 959.49708 P55060 P55060 384 391 CSE1L Exportin-2 yes yes 2 0.023862 132.76 By MS/MS 4 0 1 1 1928300 1928300 0 11977 1025 12776 30232 21337 21337 1 52640 0 RAASAATAAPTATPAAQESGTIPK GRPREALSTNECKARRAASAATAAPTATPA PTATPAAQESGTIPKKRQEVMKWNGWGYND R R A P K K 9 1 0 0 0 1 1 1 0 1 0 1 0 0 3 2 4 0 0 0 0 0 24 1 2238.1604 O00116 O00116 62 85 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 3 0.00184 73.11 By MS/MS 5.5 0.5 1 1 2 3160000 3160000 0 11978 67 12777 30233;30234 21338 21338 1 116290 0 RADDDRFPR DRGPWRNMDDDRLSRRADDDRFPRRGDDSR DDRLSRRADDDRFPRRGDDSRPGPWRPLVK R R A P R R 1 3 0 3 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 9 2 1146.553 Q14152 Q14152 1151 1159 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.044637 114.89 By MS/MS 3 0 1 1 658680 658680 0 11979 1409 12778 30235 21339 21339 1 17195 0 RADDNATIR RDGASRRGESMQPNRRADDNATIRVTNLSE SMQPNRRADDNATIRVTNLSEDTRETDLQE R R A I R V 2 2 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 9 1 1030.5156 O75821 O75821 234 242 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 0.00039401 170.5 By MS/MS 7 0.816 1 1 1 3 11384000 11384000 0 11980 330 12779 30236;30237;30238 21340;21341 21340 2 194260 0 RADPAELR ______________________________ AKVALTKRADPAELRTIFLKYASIEKNGEF K R A L R T 2 2 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 8 1 926.49338 Q9UJS0 Q9UJS0 11 18 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.025653 131.03 By MS/MS By matching 5.75 0.829 2 1 1 3 1 33316000 33265000 51271 11981 2798 12780 30239;30240;30241;30242 21342 21342 1 1260500 151710 RAEAEKQLQQAQAAGAEQEVEK PPQLKSGELAKRSERRAEAEKQLQQAQAAG LQQAQAAGAEQEVEKFTKRLVKVTKQHNDE R R A E K F 6 1 0 0 0 5 5 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 22 2 2411.2041 P39748 P39748 104 125 FEN1 Flap endonuclease 1 yes yes 3 3.3555E-05 103.84 By MS/MS 7 0 1 1 866950 866950 0 11982 826 12781 30243 21343 21343 1 15493 0 RAEATAASTSR APADRQQYLRQEVLRRAEATAASTSRSLAL EVLRRAEATAASTSRSLALMYESEKVGVAS R R A S R S 4 2 0 0 0 0 1 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 11 1 1119.5632 O95721 O95721 52 62 SNAP29 Synaptosomal-associated protein 29 yes yes 2 3.5154E-06 209.8 By MS/MS 8.5 0.5 1 1 2 1369400 1369400 0 11983 403 12782 30244;30245 21344 21344 1 99801 0 RAEEQMLK RRITYYREKEEEEQRRAEEQMLKEREERER KEEEEQRRAEEQMLKEREERERAERAKREE R R A L K E 1 1 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 8 1 1003.5121 Q14152 Q14152 817 824 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.027323 129.42 By MS/MS 2 0.816 1 1 1 3 2838700 2838700 0 11984 1409 12783 30246;30247;30248 21345 21345 1 79422 0 RAEEQMLKER RRITYYREKEEEEQRRAEEQMLKEREERER EEEQRRAEEQMLKEREERERAERAKREEEL R R A E R E 1 2 0 0 0 1 3 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 10 2 1288.6558 Q14152 Q14152 817 826 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.011672 88.155 By MS/MS 3 0 1 1 634860 634860 0 11985 1409 12784 30249 21346 21346 1 16573 0 RAGELTEDEVER YAHVVLRKADIDLTKRAGELTEDEVERVIT LTKRAGELTEDEVERVITIMQNPRQYKIPD K R A E R V 1 2 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 12 1 1402.6688 P62269 P62269 55 66 RPS18 40S ribosomal protein S18 yes yes 2;3 3.5155E-05 208.33 By MS/MS 9 0 2 2 1846000 1846000 0 11986 1124 12785 30250;30251 21347;21348 21347 2 1059400 0 RAIYQATYR YSYDLEVEQAYDLARRAIYQATYRDAYSGG AYDLARRAIYQATYRDAYSGGAVNLYHVRE R R A Y R D 2 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 9 1 1140.604 P28074 P28074 217 225 PSMB5 Proteasome subunit beta type-5 yes yes 2;3 1.9762E-05 177.3 By MS/MS 9 0 2 2 3099200 3099200 0 11987 715 12786 30252;30253 21349;21350 21349 2 1778700 0 RALEYTIYNQELNETR EKEELAQYQKWDKMRRALEYTIYNQELNET ALEYTIYNQELNETRAKLDELSAKRETSGE R R A T R A 1 2 2 0 0 1 3 0 0 1 2 0 0 0 0 0 2 0 2 0 0 0 16 1 2011.9963 Q9UQE7 Q9UQE7 221 236 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0017381 112.57 By MS/MS 3 0 1 1 411220 411220 0 11988 2860 12787 30254 21351 21351 1 10735 0 RALIAGGGAPEIELALR SIHDALCVIRCLVKKRALIAGGGAPEIELA LIAGGGAPEIELALRLTEYSRTLSGMESYC K R A L R L 4 2 0 0 0 0 2 3 0 2 3 0 0 0 1 0 0 0 0 0 0 0 17 1 1705.9839 P50991 P50991 419 435 CCT4 T-complex protein 1 subunit delta yes yes 3 0.003606 102.29 By MS/MS 6 0 1 1 5027400 5027400 0 11989 956 12788 30255 21352 21352 1 39204 0 RALSSQHQAR NRAVQKLRREVEKAKRALSSQHQARIEIES VEKAKRALSSQHQARIEIESFYEGEDFSET K R A A R I 2 2 0 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 10 1 1152.6112 P11021 P11021 297 306 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.00086061 123.96 By MS/MS 5.75 0.829 2 1 1 4 2901200 2901200 0 11990 545 12789 30256;30257;30258;30259 21353;21354 21353 2 110010 0 RAMQDMQLLWEK QQEMQQMYDMIMQHKRAMQDMQLLWEKAVQ QHKRAMQDMQLLWEKAVQQHQHGYDSDEEV K R A E K A 1 1 0 1 0 2 1 0 0 0 2 1 2 0 0 0 0 1 0 0 0 0 12 1 1547.7589 Q8IWZ8 Q8IWZ8 463 474 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2 0.026926 64.297 By MS/MS 8 0 1 1 1159500 1159500 0 11991 1869 12790 30260 21355 21355 1281;1282 1 76491 0 RANEFLEVGKK ______________________________ NALKRANEFLEVGKKQPALDVLYDVMKSKK K R A K K Q 1 1 1 0 0 0 2 1 0 0 1 2 0 1 0 0 0 0 0 1 0 0 11 2 1289.7092 Q14152 Q14152 14 24 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.016596 85.522 By MS/MS 3 0 1 1 1005200 1005200 0 11992 1409 12791 30261 21356 21356 1 26240 0 RAPDQAAEIGSR LGSRGLCTRLATPPRRAPDQAAEIGSRGST PPRRAPDQAAEIGSRGSTKAQGPQQQPGSE R R A S R G 3 2 0 1 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 12 1 1269.6426 Q3ZCQ8 Q3ZCQ8 32 43 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.00028382 160.91 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 15278000 15252000 25985 11993 1573 12792 30262;30263;30264;30265;30266 21357;21358;21359 21357 3 735800 106670 RAPFDLFENK VEGQLEFRALLFIPRRAPFDLFENKKKKNN LFIPRRAPFDLFENKKKKNNIKLYVRRVFI R R A N K K 1 1 1 1 0 0 1 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 10 1 1235.6299 P08238;Q58FF7 P08238 338 347 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0068239 118.03 By MS/MS 5.5 1.12 1 1 1 1 4 23747000 23747000 0 11994 501 12793 30267;30268;30269;30270 21360;21361;21362;21363;21364 21361 5 740430 0 RAPFDLFENKK VEGQLEFRALLFIPRRAPFDLFENKKKKNN FIPRRAPFDLFENKKKKNNIKLYVRRVFIM R R A K K K 1 1 1 1 0 0 1 0 0 0 1 2 0 2 1 0 0 0 0 0 0 0 11 2 1363.7248 P08238;Q58FF7 P08238 338 348 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 3 0.00118 103.46 By MS/MS 4.5 0.5 1 1 2 2201300 2201300 0 11995 501 12794 30271;30272 21365;21366 21365 2 79509 0 RAPFDLFENR VEGQLEFRALLFVPRRAPFDLFENRKKKNN LFVPRRAPFDLFENRKKKNNIKLYVRRVFI R R A N R K 1 2 1 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 10 1 1263.636 P07900 P07900 346 355 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 0.029397 98.048 By MS/MS 4.86 1.25 1 2 2 1 1 7 11373000 11373000 0 11996 494 12795 30273;30274;30275;30276;30277;30278;30279 21367;21368 21367 2 304180 0 RAPTWSPEEEAHLR MTEGYGSLDDRSSSRRAPTWSPEEEAHLRE RRAPTWSPEEEAHLRELYLANKDVEGQDVV R R A L R E 2 2 0 0 0 0 3 0 1 0 1 0 0 0 2 1 1 1 0 0 0 0 14 1 1677.8223 Q9UNS1 Q9UNS1 818 831 TIMELESS Protein timeless homolog yes yes 3 0.0034025 101.72 By MS/MS 3 0 1 1 855590 855590 0 11997 2846 12796 30280 21369 21369 1 22335 0 RAQSELAAHQK VGLKSKTHAVLVALKRAQSELAAHQKKILH VALKRAQSELAAHQKKILHVDNHIGISIAG K R A Q K K 3 1 0 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 11 1 1237.6527 P25786 P25786 51 61 PSMA1 Proteasome subunit alpha type-1 yes yes 3 0.00019093 150.46 By MS/MS 8 0 1 1 460910 460910 0 11998 688 12797 30281 21370 21370 1 30406 0 RAQTGSGGADPTTDVSGQS QLTGSKMKLLNLYIKRAQTGSGGADPTTDV GSGGADPTTDVSGQS_______________ K R A Q S - 2 1 0 2 0 2 0 4 0 0 0 0 0 0 1 3 3 0 0 1 0 0 19 1 1790.8031 O75122 O75122 1276 1294 CLASP2 CLIP-associating protein 2 yes yes 2 3.3628E-12 176.42 By MS/MS 3 0 1 1 502250 502250 0 11999 279 12798 30282 21371 21371 1 13111 0 RATISLSDSDLLR LLLTDGDVHIRDDGRRATISLSDSDLLRLE GRRATISLSDSDLLRLEGDSRTVRLLKELR R R A L R L 1 2 0 2 0 0 0 0 0 1 3 0 0 0 0 3 1 0 0 0 0 0 13 1 1445.7838 Q7L2E3 Q7L2E3 1115 1127 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.043501 103.43 By MS/MS 3 0 1 1 0 0 0 12000 1763 12799 30283 21372 21372 1 0 0 RATVVESSEK GDYYRYLAEVATGEKRATVVESSEKAYSEA ATGEKRATVVESSEKAYSEAHEISKEHMQP K R A E K A 1 1 0 0 0 0 2 0 0 0 0 1 0 0 0 2 1 0 0 2 0 0 10 1 1104.5775 P61981 P61981 143 152 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.0025102 139.15 By MS/MS 8 0 1 1 692250 692250 0 12001 1111 12800 30284 21373 21373 1 45668 0 RAVAGDASESALLK RAVFQANQENLPILKRAVAGDASESALLKC KRAVAGDASESALLKCIELCCGSVKEMRER K R A L K C 4 1 0 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 14 1 1386.7467 P05023 P05023 445 458 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.054783 60.657 By MS/MS 2 0.816 1 1 1 3 632300 632300 0 12002 463 12801 30285;30286;30287 21374 21374 1 23252 0 RAVLQAAR DAVITVPVFFNQAERRAVLQAARMAGLKVL FFNQAERRAVLQAARMAGLKVLQLINDNTA R R A A R M 3 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 883.53518 Q9Y4L1 Q9Y4L1 186 193 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.039107 119.56 By MS/MS 3 0 1 1 408350 408350 0 12003 2955 12802 30288 21375 21375 1 10660 0 RAYLQAR SLGCRVFTTVGSAEKRAYLQARFPQLDSTS TTVGSAEKRAYLQARFPQLDSTSFANSRDT K R A A R F 2 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 1 876.49298 P49327 P49327 1705 1711 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.022501 175.93 By MS/MS 2.5 1.12 1 1 1 1 4 2985800 2985800 0 12004 915 12803 30289;30290;30291;30292 21376 21376 1 117210 0 RCDIIIISGR GEGREAKDCDPGSPRRCDIIIISGRKEKCE PGSPRRCDIIIISGRKEKCEAAKEALEALV R R C G R K 0 2 0 1 1 0 0 1 0 4 0 0 0 0 0 1 0 0 0 0 0 0 10 1 1201.6601 Q00341 Q00341 947 956 HDLBP Vigilin yes yes 2 0.041043 98.898 By MS/MS 3.5 0.5 1 1 2 4211200 4211200 0 12005 1231 12804 30293;30294 21377 21377 1 110220 0 RDAVPAFIEPNVR LEQEEETQPGRLLGRRDAVPAFIEPNVRFW GRRDAVPAFIEPNVRFWITERQSFIRRFLQ R R D V R F 2 2 1 1 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 2 0 0 13 1 1482.7943 Q6P4A7 Q6P4A7 18 30 SFXN4 Sideroflexin-4 yes yes 2 0.021666 114.76 By MS/MS 7.5 0.5 1 1 2 1082300 1082300 0 12006 1709 12805 30295;30296 21378 21378 1 52032 0 RDEFLGR FKENVIRPILKAHFRRDEFLGRINEIVYFL PILKAHFRRDEFLGRINEIVYFLPFCHSEL R R D G R I 0 2 0 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 1 891.45626 Q9H078 Q9H078 555 561 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.047039 148.04 By MS/MS 6.5 1.12 1 1 1 1 4 17490000 17490000 0 12007 2448 12806 30297;30298;30299;30300 21379 21379 1 173060 0 RDFAPPGQQK LVALILLHSALAQSRRDFAPPGQQKREAPV LAQSRRDFAPPGQQKREAPVDVLTQIGRSV R R D Q K R 1 1 0 1 0 2 0 1 0 0 0 1 0 1 2 0 0 0 0 0 0 0 10 1 1142.5833 Q9BVC6 Q9BVC6 37 46 TMEM109 Transmembrane protein 109 yes yes 2 0.0040718 120.45 By MS/MS 9 0 1 1 1085800 1085800 0 12008 2376 12807 30301 21380 21380 1 623160 0 RDFTPAELRR DSDDDEPPPLPRLKRRDFTPAELRRFDGVQ PRLKRRDFTPAELRRFDGVQDPRILMAING R R D R R F 1 3 0 1 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 10 2 1259.6735 O00264 O00264 71 80 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.00067925 133.75 By MS/MS 9.5 0.5 1 1 2 3133800 3133800 0 12009 85 12808 30302;30303 21381 21381 1 1828200 0 RDHALLEEQSK IINSKWEKVQQLVPKRDHALLEEQSKQQSN LVPKRDHALLEEQSKQQSNEHLRRQFASQA K R D S K Q 1 1 0 1 0 1 2 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 11 1 1324.6735 O43707 O43707 633 643 ACTN4 Alpha-actinin-4 yes yes 3 0.046999 69.716 By MS/MS 4 0 1 1 597900 597900 0 12010 217 12809 30304 21382 21382 1 16322 0 RDHFEEAMR SAMEVEEDDPVPEIRRDHFEEAMRFARRSV PVPEIRRDHFEEAMRFARRSVSDNDIRKYE R R D M R F 1 2 0 1 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 9 1 1189.5298 P55072 P55072 733 741 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.012947 96.143 By MS/MS 4 0 1 1 1136000 1136000 0 12011 1026 12810 30305 21383 21383 1 31013 0 RDHPLPEVAHVK VVKSEDFSLPAYMDRRDHPLPEVAHVKHLS MDRRDHPLPEVAHVKHLSASQKALKEKEKA R R D V K H 1 1 0 1 0 0 1 0 2 0 1 1 0 0 2 0 0 0 0 2 0 0 12 1 1396.7575 P13073 P13073 42 53 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 4 0.033065 56.122 By MS/MS 10 0 1 1 191020 191020 0 12012 571 12811 30306 21384 21384 1 203030 0 RDLEAVNSR ALEIDGLEEKLSQCRRDLEAVNSRLHSREL KLSQCRRDLEAVNSRLHSRELSPEARRSLE R R D S R L 1 2 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 1 1058.5469 Q9P0B6 Q9P0B6 27 35 CCDC167 Coiled-coil domain-containing protein 167 yes yes 2 0.0065138 133.23 By MS/MS 10 0 1 1 348130 348130 0 12013 2724 12812 30307 21385 21385 1 370030 0 RDQALTEEHAR EINGKWDHVRQLVPRRDQALTEEHARQQHN LVPRRDQALTEEHARQQHNERLRKQFGAQA R R D A R Q 2 2 0 1 0 1 2 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 11 1 1324.6484 P12814 P12814 614 624 ACTN1 Alpha-actinin-1 yes yes 3 0.0010996 139.76 By MS/MS 4 0 1 1 740770 740770 0 12014 568 12813 30308 21386 21386 1 20222 0 RDVDFELIKVEGK EIAVNAVLTVADMERRDVDFELIKVEGKVG ERRDVDFELIKVEGKVGGRLEDTKLIKGVI R R D G K V 0 1 0 2 0 0 2 1 0 1 1 2 0 1 0 0 0 0 0 2 0 0 13 2 1546.8355 P48643 P48643 202 214 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.00031429 162.93 By MS/MS 6 0 1 1 6135600 6135600 0 12015 909 12814 30309 21387 21387 1 47846 0 RDYLKEAVTTLK LNDAANSRLIITQVRRDYLKEAVTTLKTVL QVRRDYLKEAVTTLKTVLDQQQTPSRLAVT R R D L K T 1 1 0 1 0 0 1 0 0 0 2 2 0 0 0 0 2 0 1 1 0 0 12 2 1435.8035 P42704 P42704 1117 1128 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.029495 76.588 By MS/MS 3.5 0.5 1 1 2 4652000 4652000 0 12016 854 12815 30310;30311 21388 21388 1 121760 0 REAGEDEEGFLSK SGGSTMDSSAGSKARREAGEDEEGFLSKLK ARREAGEDEEGFLSKLKKMFTS________ R R E S K L 1 1 0 1 0 0 4 2 0 0 1 1 0 1 0 1 0 0 0 0 0 0 13 1 1465.6685 Q96EY1 Q96EY1 461 473 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2;3 0.0038244 105.65 By MS/MS 7 0 2 2 7814500 7814500 0 12017 2169 12816 30312;30313 21389;21390 21390 2 139650 0 REDAVSKEVTR YKNVKFVLKHKVAQKREDAVSKEVTRKLSE VAQKREDAVSKEVTRKLSEADNRKMSRKEK K R E T R K 1 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 11 2 1288.6735 Q9UNL2 Q9UNL2 92 102 SSR3 Translocon-associated protein subunit gamma yes yes 3 0.027814 81.709 By MS/MS 9 0 1 1 620540 620540 0 12018 2844 12817 30314 21391 21391 1 356130 0 REDLVVAPAGITLK KEEEHDCFLEEIMTKREDLVVAPAGITLKE KREDLVVAPAGITLKEANEILQRSKKGKLP K R E L K E 2 1 0 1 0 0 1 1 0 1 2 1 0 0 1 0 1 0 0 2 0 0 14 1 1480.8613 P12268 P12268 182 195 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 1.9713E-05 172.58 By MS/MS 7 0.816 1 1 1 3 10405000 10405000 0 12019 564 12818 30315;30316;30317 21392;21393 21392 2 103180 0 REEELREYQER MLKEREERERAERAKREEELREYQERVKKL ERAKREEELREYQERVKKLEEVERKKRQRE K R E E R V 0 3 0 0 0 1 5 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 11 2 1535.7328 Q14152 Q14152 837 847 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.017622 97.214 By MS/MS By matching 3.33 0.471 2 1 2 1 3849300 3821700 27577 12020 1409 12819 30318;30319;30320 21394 21394 1 100250 39523 REGPPFISEAAVR ______________________________ AKREGPPFISEAAVRGNAAVLDYCRTSVSA K R E V R G 2 2 0 0 0 0 2 1 0 1 0 0 0 1 2 1 0 0 0 1 0 0 13 1 1427.7521 Q9BV81 Q9BV81 8 20 EMC6 ER membrane protein complex subunit 6 yes yes 3 0.041875 69.314 By MS/MS 10 0 1 1 324480 324480 0 12021 2373 12820 30321 21395 21395 1 344890 0 REILETLIK CGIFAYLNYHVPRTRREILETLIKGLQRLE HVPRTRREILETLIKGLQRLEYRGYDSAGV R R E I K G 0 1 0 0 0 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 9 1 1113.6758 Q06210 Q06210 17 25 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.020817 114.89 By MS/MS 5.5 0.5 1 1 2 1739800 1739800 0 12022 1274 12821 30322;30323 21396 21396 1 60735 0 REPLSLINVR GARPGPGVWDPNWDRREPLSLINVRKRNVE PNWDRREPLSLINVRKRNVESGEEELASKL R R E V R K 0 2 1 0 0 0 1 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 10 1 1195.7037 Q96HS1 Q96HS1 65 74 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 3 0.00060866 123.96 By MS/MS 8.5 0.5 1 1 2 4118100 4118100 0 12023 2196 12822 30324;30325 21397 21397 1 320580 0 RETYTEDFIKK HTAFVIPKKNVPTSKRETYTEDFIKKQIEE PTSKRETYTEDFIKKQIEEFNIGKRHLANM K R E K K Q 0 1 0 1 0 0 2 0 0 1 0 2 0 1 0 0 2 0 1 0 0 0 11 2 1428.7249 P82933 P82933 66 76 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 2.5849E-22 225.55 By MS/MS 7.5 0.5 1 1 2 8945200 8945200 0 12024 1211 12823 30326;30327 21398 21398 1 172520 0 RFDAQTGADREVQR PAIIFIDEIDAIATKRFDAQTGADREVQRI KRFDAQTGADREVQRILLELLNQMDGFDQN K R F Q R I 2 3 0 2 0 2 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 14 2 1647.8077 P43686 P43686 274 287 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.0016166 115.24 By MS/MS 8 1.41 1 1 1 1 1 5 31438000 31438000 0 12025 867 12824 30328;30329;30330;30331;30332 21399;21400;21401 21399 3 604610 0 RFDDAVVQSDMK NPTNTVFDAKRLIGRRFDDAVVQSDMKHWP IGRRFDDAVVQSDMKHWPFMVVNDAGRPKV R R F M K H 1 1 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 12 1 1409.6609 P11142 P11142 77 88 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.0059802 122.18 By MS/MS By matching 5.4 0.49 3 2 4 1 6140100 6113400 26681 12026 546 12825 30333;30334;30335;30336;30337 21402;21403 21403 340 2 151730 78950 RFEECISQSAVK EGFQVRMFEFQNFERRFEECISQSAVKTKF FERRFEECISQSAVKTKFEQHTVRAKQIAE R R F V K T 1 1 0 0 1 1 2 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 12 1 1452.7031 O95140 O95140 344 355 MFN2 Mitofusin-2 yes yes 2 0.0001289 169.65 By MS/MS 5 0 1 1 1373300 1373300 0 12027 366 12826 30338 21404 21404 1 56447 0 RFEIPDEEHCLK SGCKIRVQGDWIRERRFEIPDEEHCLKFLS RERRFEIPDEEHCLKFLSAVLAAQKAQSQL R R F L K F 0 1 0 1 1 0 3 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 12 1 1571.7402 Q01968 Q01968 95 106 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 3 0.0059072 86.699 By MS/MS 4 0 1 1 859280 859280 0 12028 1248 12827 30339 21405 21405 1 23457 0 RFEKPLEEK KIIDRRPERRPPRERRFEKPLEEKGEGGEF RPPRERRFEKPLEEKGEGGEFSVDRPIIDR R R F E K G 0 1 0 0 0 0 3 0 0 0 1 2 0 1 1 0 0 0 0 0 0 0 9 2 1174.6346 Q8NC51 Q8NC51 137 145 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.017531 128.6 By MS/MS 6 0 1 1 4196600 4196600 0 12029 1949 12828 30340 21406 21406 1 32725 0 RFGVPVIADGGIQNVGHIAK RPQATAVYKVSEYARRFGVPVIADGGIQNV VIADGGIQNVGHIAKALALGASTVMMGSLL R R F A K A 2 1 1 1 0 1 0 4 1 3 0 1 0 1 1 0 0 0 0 3 0 0 20 1 2047.1327 P12268 P12268 356 375 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.035716 75.564 By MS/MS 6 0 1 1 3709000 3709000 0 12030 564 12829 30341 21407 21407 0 28923 0 RFMFEMPFTQTGKR LQERKTEFERSHNIRRFMFEMPFTQTGKRQ RRFMFEMPFTQTGKRQGGVEEQCKRRTILT R R F K R Q 0 2 0 0 0 1 1 1 0 0 0 1 2 3 1 0 2 0 0 0 0 0 14 2 1774.8647 Q9BZ29 Q9BZ29 1895 1908 DOCK9 Dedicator of cytokinesis protein 9 yes yes 2 0.039058 99.568 By MS/MS 7 0 1 1 380160 380160 0 12031 2419 12830 30342 21408 21408 1494 1 6793.5 0 RFSEGTSADR PCIIFMDEIDAIGGRRFSEGTSADREIQRT AIGGRRFSEGTSADREIQRTLMELLNQMDG R R F D R E 1 2 0 1 0 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 10 1 1124.521 P62333 P62333 242 251 PSMC6 26S protease regulatory subunit 10B yes yes 2 0.001041 154.01 By MS/MS By matching 7 0 2 1 1 867450 861550 5897.2 12032 1133 12831 30343;30344 21409 21409 1 15396 24209 RGDDSFGDK RARPATDSFDDYPPRRGDDSFGDKYRDRYD DDYPPRRGDDSFGDKYRDRYDSDRYRDGYR R R G D K Y 0 1 0 3 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 0 0 0 9 1 995.43084 P23588 P23588 215 223 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.036239 106.2 By MS/MS 5 0 1 1 68789 0 68789 12033 672 12832 30345 21410 21410 1 0 203550 RGDDSFGDKYR RARPATDSFDDYPPRRGDDSFGDKYRDRYD YPPRRGDDSFGDKYRDRYDSDRYRDGYRDG R R G Y R D 0 2 0 3 0 0 0 2 0 0 0 1 0 1 0 1 0 0 1 0 0 0 11 2 1314.5953 P23588 P23588 215 225 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 0.0005386 132.14 By MS/MS By MS/MS 5 0 2 1 1 6784300 6346800 437510 12034 672 12833 30346;30347 21411;21412 21412 2 260880 1294600 RGDIVFVDR YGFATIASAIPAYSKRGDIVFVDRAACFAI IPAYSKRGDIVFVDRAACFAIQKGLQASRS K R G D R A 0 2 0 2 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 9 1 1075.5774 O15269 O15269 181 189 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.0068402 148.94 By MS/MS 7 0.816 1 1 1 3 38029000 38029000 0 12035 165 12834 30348;30349;30350 21413 21413 1 325790 0 RGDLDKAYTK EFAGLAESIFKNAERRGDLDKAYTKLIRGV KNAERRGDLDKAYTKLIRGVFVNVEKVANE R R G T K L 1 1 0 2 0 0 0 1 0 0 1 2 0 0 0 0 1 0 1 0 0 0 10 2 1165.6091 Q9NV70 Q9NV70 695 704 EXOC1 Exocyst complex component 1 yes yes 3 0.046395 65.179 By MS/MS 4 0 1 1 436330 436330 0 12036 2645 12835 30351 21414 21414 1 11911 0 RGDTYELQVR SAPTFINFPAKGKPKRGDTYELQVRGFSAE KGKPKRGDTYELQVRGFSAEQIARWIADRT K R G V R G 0 2 0 1 0 1 1 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 1 1235.6258 Q9H0U3 Q9H0U3 150 159 MAGT1 Magnesium transporter protein 1 yes yes 2 0.0023495 140.78 By MS/MS 2.5 1.12 1 1 1 1 4 2144800 2144800 0 12037 2458 12836 30352;30353;30354;30355 21415;21416 21415 2 89746 0 RGEAHLAVNDFELAR KALELDSNNEKGLFRRGEAHLAVNDFELAR RGEAHLAVNDFELARADFQKVLQLYPNNKA R R G A R A 3 2 1 1 0 0 2 1 1 0 2 0 0 1 0 0 0 0 0 1 0 0 15 1 1696.8645 Q02790 Q02790 359 373 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2;3 0.0038542 123.95 By MS/MS 6 0 2 2 26254000 26254000 0 12038 1255 12837 30356;30357 21417;21418 21417 2 204730 0 RGEKEECFER LALASGSSIHLYNTRRGEKEECFERVHGEC LYNTRRGEKEECFERVHGECIANLSFDITG R R G E R V 0 2 0 0 1 0 4 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 10 2 1338.5986 Q9Y4P3 Q9Y4P3 361 370 TBL2 Transducin beta-like protein 2 yes yes 3 0.0038944 91.313 By MS/MS 6.5 0.5 1 1 2 1771800 1771800 0 12039 2957 12838 30358;30359 21419 21419 1 29259 0 RGEPHVTR DTLKYSFLQFDPAPRRGEPHVTRRTPDYFL QFDPAPRRGEPHVTRRTPDYFL________ R R G T R R 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 8 1 950.50461 P67775;P62714 P67775 295 302 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes no 2 0.023862 132.76 By MS/MS 8 0 1 1 1004700 1004700 0 12040 1181 12839 30360 21420 21420 1 66283 0 RGFSANSAR MASTSTTIRSHSSSRRGFSANSARLPGVSR SHSSSRRGFSANSARLPGVSRSGFSSVSVS R R G A R L 2 2 1 0 0 0 0 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 9 1 964.48388 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 16 24 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.0061542 134.23 By MS/MS By matching 3.5 1.12 1 1 1 1 1 3 1008500 819550 188980 + 12041 36;53;449 12840 30361;30362;30363;30364 21421 21421 1 33687 300180 RGGPAGPYQQSQR DMLEWAGIPPDESPRRGGPAGPYQQSQRLE PRRGGPAGPYQQSQRLELYAQATEALLKTG R R G Q R L 1 2 0 0 0 3 0 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 13 1 1400.6909 Q5JPH6 Q5JPH6 108 120 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 1.6198E-05 175.33 By MS/MS 6 0 1 1 1060000 1060000 0 12042 1604 12841 30365 21422;21423 21423 2 8265.6 0 RGHSAQIAK VDRIKEAVRSKNMARRGHSAQIAKPIRPGQ SKNMARRGHSAQIAKPIRPGQHPAASPTHP R R G A K P 2 1 0 0 0 1 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 9 1 966.53591 P33176;Q12840 P33176 914 922 KIF5B;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A yes no 2 0.036239 86.67 By MS/MS 4 0 1 1 163180 163180 0 12043 767 12842 30366 21424 21424 1 4454.7 0 RGLGAGAGAGEESPATSLPR LVLLGAYRLWVRWGRRGLGAGAGAGEESPA GAGAGEESPATSLPRMKKRDFSLEQLRQYD R R G P R M 4 2 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 20 1 1852.9391 O15173 O15173 78 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 3 0.0015506 87.356 By MS/MS 8.5 0.5 1 1 2 1505400 1505400 0 12044 157 12843 30367;30368 21425 21425 1 266580 0 RGNIQEIQTR ARDYLSPVLADLAQRRGNIQEIQTRQDNKV DLAQRRGNIQEIQTRQDNKVVIGFVPLAEI R R G T R Q 0 2 1 0 0 2 1 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 10 1 1213.6527 Q969S9 Q969S9 712 721 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 0.0018227 146.11 By MS/MS 5 0 1 1 1024400 1024400 0 12045 2107 12844 30369 21426 21426 1 42106 0 RGPAEESSSWR REDRFRRPRDEGGWRRGPAEESSSWRDSSR GGWRRGPAEESSSWRDSSRRDDRDRDDRRR R R G W R D 1 2 0 0 0 0 2 1 0 0 0 0 0 0 1 3 0 1 0 0 0 0 11 1 1260.5847 Q14152 Q14152 1250 1260 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.0029736 133.89 By MS/MS By matching 3 0 3 2 1 6082400 6064700 17633 12046 1409 12845 30370;30371;30372 21427;21428 21428 2 158320 25272 RGPAPQDQAGPGGAPR LFRIFIIWAISSWFRRGPAPQDQAGPGGAP GPAPQDQAGPGGAPRVASRNLFPKDTLMNL R R G P R V 3 2 0 1 0 2 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 16 1 1530.7651 O96005 O96005 75 90 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 3 0.052285 51.073 By MS/MS 1.5 0.5 1 1 2 226590 226590 0 12047 418 12846 30373;30374 21429 21429 0 11131 0 RGPGLYYVDSEGNR GMGLSMGTMICGWDKRGPGLYYVDSEGNRI KRGPGLYYVDSEGNRISGATFSVGSGSVYA K R G N R I 0 2 1 1 0 0 1 3 0 0 1 0 0 0 1 1 0 0 2 1 0 0 14 1 1581.7536 P28074 P28074 166 179 PSMB5 Proteasome subunit beta type-5 yes yes 3 0.009551 92.039 By MS/MS 9 0 1 1 1316900 1316900 0 12048 715 12847 30375 21430 21430 1 755810 0 RGPPEKEWR EGTWRKGPEADSEWRRGPPEKEWRRGEGRD ADSEWRRGPPEKEWRRGEGRDEDRSHRRDE R R G W R R 0 2 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 1 0 0 0 0 9 2 1153.5992 Q14152 Q14152 911 919 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0032176 114.4 By MS/MS 3.5 0.5 1 1 2 5050800 5050800 0 12049 1409 12848 30376;30377 21431 21431 1 132430 0 RGSNTTSHLHQAVAK FSVLQHVLGAGPHVKRGSNTTSHLHQAVAK RGSNTTSHLHQAVAKATQQPFDVSAFNASY K R G A K A 2 1 1 0 0 1 0 1 2 0 1 1 0 0 0 2 2 0 0 1 0 0 15 1 1605.8336 P22695 P22695 301 315 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 3;4 0.0014042 106.76 By MS/MS 7 0 2 2 2779900 2779900 0 12050 662 12849 30378;30379 21432;21433 21433 2 49677 0 RGTGGVDTAATGGVFDISNLDR DSRFPKILENLRLQKRGTGGVDTAATGGVF TAATGGVFDISNLDRLGKSEVELVQLVIDG K R G D R L 2 2 1 3 0 0 0 5 0 1 1 0 0 1 0 1 3 0 0 2 0 0 22 1 2178.0665 P12532 P12532 353 374 CKMT1A Creatine kinase U-type, mitochondrial yes yes 3 0.00031966 86.832 By MS/MS 7 0 1 1 555970 555970 0 12051 566 12850 30380 21434 21434 1 9935.3 0 RGVMLAVDAVIAELKK GFEKISKGANPVEIRRGVMLAVDAVIAELK GVMLAVDAVIAELKKQSKPVTTPEEIAQVA R R G K K Q 3 1 0 1 0 0 1 1 0 1 2 2 1 0 0 0 0 0 0 3 0 0 16 2 1712.0019 P10809 P10809 142 157 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.016563 81.51 By MS/MS 6 0 1 1 1823400 1823400 0 12052 544 12851 30381 21435 21435 324 1 14219 0 RHEVLTR LLVIGTKLDQIHETKRHEVLTRTAFLAEDF LDQIHETKRHEVLTRTAFLAEDFNPEEINL K R H T R T 0 2 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 7 1 909.51445 Q5HYI8 Q5HYI8 157 163 RABL3 Rab-like protein 3 yes yes 3 0.016722 110.12 By MS/MS 8.5 0.5 1 1 2 1094900 1094900 0 12053 1601 12852 30382;30383 21436 21436 1 102250 0 RHLTGEFEK VLVGDGGTGKTTFVKRHLTGEFEKKYVATL KTTFVKRHLTGEFEKKYVATLGVEVHPLVF K R H E K K 0 1 0 0 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 9 1 1115.5724 P62826 P62826 29 37 RAN GTP-binding nuclear protein Ran yes yes 3 0.019032 102.06 By MS/MS 9 0 1 1 0 0 0 12054 1146 12853 30384 21437 21437 1 0 0 RHPNTQQR SDNDFVTPEPRRTTRRHPNTQQRASKKKPK EPRRTTRRHPNTQQRASKKKPKVVFSSDES R R H Q R A 0 2 1 0 0 2 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 8 1 1035.5322 Q15021 Q15021 1348 1355 NCAPD2 Condensin complex subunit 1 yes yes 3 0.019614 98.458 By MS/MS 3.5 0.5 1 1 2 85282 85282 0 12055 1464 12854 30385;30386 21438 21438 1 2246.5 0 RIAAEEKK ATRYNYLKPRAEEERRIAAEEKKKQDELKR PRAEEERRIAAEEKKKQDELKRIARELAED R R I K K K 2 1 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 8 2 943.54508 P56385 P56385 42 49 ATP5I ATP synthase subunit e, mitochondrial yes yes 3 0.004068 122.28 By MS/MS 10 0 1 1 94837 94837 0 12056 1046 12855 30387 21439 21439 1 100800 0 RIADEDRGNWR DRPSWRNTDDDRPPRRIADEDRGNWRHADD RPPRRIADEDRGNWRHADDDRPPRRGLDED R R I W R H 1 3 1 2 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 11 2 1386.6753 Q14152 Q14152 1000 1010 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.016337 102.95 By MS/MS By matching 3.33 0.471 2 1 2 1 4190400 4159300 31148 12057 1409 12856 30388;30389;30390 21440 21440 1 108880 44641 RIEDNLPAGEE LKGDGVTEIRMRFIRRIEDNLPAGEE____ RFIRRIEDNLPAGEE_______________ R R I E E - 1 1 1 1 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 11 1 1241.5888 O43617 O43617 170 180 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 2 0.0016153 146.11 By MS/MS 9.5 0.5 1 1 2 1546200 1546200 0 12058 210 12857 30391;30392 21441;21442 21441 2 1340200 0 RIGIFGQDEDVTSK MITGDNKGTAVAICRRIGIFGQDEDVTSKA RRIGIFGQDEDVTSKAFTGREFDELNPSAQ R R I S K A 0 1 0 2 0 1 1 2 0 2 0 1 0 1 0 1 1 0 0 1 0 0 14 1 1563.7893 P16615 P16615 637 650 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2;3 4.7872E-05 166.45 By MS/MS 2.67 1.49 2 1 1 1 1 6 8462000 8462000 0 12059 608 12858 30393;30394;30395;30396;30397;30398 21443;21444 21443 2 305390 0 RILGLLDAYLK HHNKQATENAKEEVRRILGLLDAYLKTRTF EEVRRILGLLDAYLKTRTFLVGERVTLADI R R I L K T 1 1 0 1 0 0 0 1 0 1 4 1 0 0 0 0 0 0 1 0 0 0 11 1 1273.7758 P26641 P26641 137 147 EEF1G Elongation factor 1-gamma yes yes 2 0.0061749 125.68 By MS/MS 6 0 1 1 1215200 1215200 0 12060 700 12859 30399 21445 21445 1 9476.5 0 RIPLAEWESR PVCEDIGRSLLTYGRRIPLAEWESRIAEVD LTYGRRIPLAEWESRIAEVDASVVREICSK R R I S R I 1 2 0 0 0 0 2 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 10 1 1255.6673 P31930 P31930 423 432 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2;3 0.040507 98.048 By MS/MS 6.5 0.5 2 2 4 8264500 8264500 0 12061 756 12860 30400;30401;30402;30403 21446;21447 21447 2 99138 0 RIPWTAASSQLK AALRRSINQPVAFVRRIPWTAASSQLKEHF FVRRIPWTAASSQLKEHFAQFGHVRRCILP R R I L K E 2 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 1 0 0 0 0 12 1 1356.7514 Q9GZT3 Q9GZT3 25 36 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2;3 7.6027E-11 210.35 By MS/MS 10 0 2 2 2142700 2142700 0 12062 2443 12861 30404;30405 21448;21449 21448 2 2277500 0 RIQDLIPVLLR ATQGPYDFGSGETARRIQDLIPVLLRHRLC ETARRIQDLIPVLLRHRLCPPPEETYALHR R R I L R H 0 2 0 1 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 11 1 1334.8398 Q96D53 Q96D53 465 475 ADCK4 AarF domain-containing protein kinase 4 yes yes 2 0.0016971 145.25 By MS/MS 6 0 1 1 745790 745790 0 12063 2147 12862 30406 21450 21450 1 5815.7 0 RIQEIIEQLDVTTSEYEKEK AMLLKGKGDKAQIEKRIQEIIEQLDVTTSE IEQLDVTTSEYEKEKLNERLAKLSDGVAVL K R I E K L 0 1 0 1 0 2 5 0 0 3 1 2 0 0 0 1 2 0 1 1 0 0 20 2 2450.254 P10809 P10809 370 389 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 7.8844E-05 119.18 By MS/MS 6 0 1 1 24307000 24307000 0 12064 544 12863 30407 21451 21451 1 189550 0 RISEQFTAMFR ATFIGNSTAIQELFKRISEQFTAMFRRKAF ELFKRISEQFTAMFRRKAFLHWYTGEGMDE K R I F R R 1 2 0 0 0 1 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 0 11 1 1384.6922 P07437;P68371;Q13885;Q9BVA1;P04350;Q13509 P68371 380 390 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 3 0.0033715 121.29 By MS/MS 6 0 1 1 5545500 5545500 0 12065 1187;490;1400;2375;451;1377 12864 30408 21452 21452 234 1 43244 0 RISQSQPVR SQSQSSYIIRNPQQRRISQSQPVRGRDEEQ RNPQQRRISQSQPVRGRDEEQDDIVSADVE R R I V R G 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 9 1 1069.5992 O95071 O95071 1547 1555 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.046464 101.25 By MS/MS 1.5 0.5 1 1 2 525620 525620 0 12066 364 12865 30409;30410 21453 21453 1 25924 0 RIVAVTGAEAQK AFVIVTEEAIAKGIRRIVAVTGAEAQKALR GIRRIVAVTGAEAQKALRKAESLKKCLSVM R R I Q K A 3 1 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 0 12 1 1241.7092 P49588 P49588 751 762 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.01429 112.64 By MS/MS 4 0 1 1 624280 624280 0 12067 921 12866 30411 21454 21454 1 17042 0 RKDIESIR TVKAICIPEGAKYLKRKDIESIRNFAADHF EGAKYLKRKDIESIRNFAADHFNQEILPVF K R K I R N 0 2 0 1 0 0 1 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 8 2 1015.5774 Q6PI48 Q6PI48 381 388 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 3 0.033668 91.658 By MS/MS 6 0.816 1 1 1 3 2713200 2713200 0 12068 1715 12867 30412;30413;30414 21455 21455 1 91342 0 RKEAELR KERLTEELKEQMKAKRKEAELRQVQSQAHG LKEQMKAKRKEAELRQVQSQAHGLQMRLKY K R K L R Q 1 2 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 2 900.51411 Q14683;P33121 Q14683 693 699 SMC1A;ACSL1 Structural maintenance of chromosomes protein 1A;Long-chain-fatty-acid--CoA ligase 1 no no 3 0.015307 102.51 By MS/MS 3 0 1 1 0 0 0 12069 1440;766 12868 30415 21456 21456 1 0 0 RKEEEVQQQK QEKERKKREERERKRRKEEEVQQQKLAEER RERKRRKEEEVQQQKLAEERRRQNLQEEKE R R K Q K L 0 1 0 0 0 3 3 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 10 2 1300.6735 Q96CS3 Q96CS3 320 329 FAF2 FAS-associated factor 2 yes yes 2;3 9.1035E-06 204.52 By MS/MS By matching 6.67 0.745 3 2 1 5 1 29701000 29680000 21744 12070 2140 12869 30416;30417;30418;30419;30420;30421 21457;21458;21459;21460 21457 4 237230 66688 RKEEIEAQIK QAGVVTVSDVQELMRRKEEIEAQIKANYDV QELMRRKEEIEAQIKANYDVLESQKGIGMN R R K I K A 1 1 0 0 0 1 3 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 10 2 1242.6932 O00233 O00233 29 38 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 3 0.00020807 152.64 By MS/MS 8.5 0.5 1 1 2 1379100 1379100 0 12071 82 12870 30422;30423 21461;21462 21462 2 261710 0 RKESTDEILGR CLLGDFVTEFFKICRRKESTDEILGRSAFE KICRRKESTDEILGRSAFEEEGKETADITH R R K G R S 0 2 0 1 0 0 2 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 11 2 1302.6892 Q15042 Q15042 337 347 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 3 4.5637E-05 160.86 By MS/MS 3 0 1 1 1537700 1537700 0 12072 1469 12871 30424 21463 21463 1 40143 0 RKEVVHTVSLHEIDVINSR SQTKFVQCPDGELQKRKEVVHTVSLHEIDV VHTVSLHEIDVINSRTQGFLALFSGDTGEI K R K S R T 0 2 1 1 0 0 2 0 2 2 1 1 0 0 0 2 1 0 0 4 0 0 19 2 2230.2182 Q9Y230 Q9Y230 235 253 RUVBL2 RuvB-like 2 yes yes 4 0.0061148 72.968 By MS/MS 6 0 1 1 3360800 3360800 0 12073 2864 12872 30425 21464 21464 1 26207 0 RKEYDALK RELRKREKAEEKERRRKEYDALKAAKREQE AEEKERRRKEYDALKAAKREQEKKPKKEAN R R K L K A 1 1 0 1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 8 2 1021.5556 Q96AG4 Q96AG4 200 207 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 3 0.016171 94.409 By MS/MS 8.5 0.5 1 1 2 1406300 1406300 0 12074 2121 12873 30426;30427 21465 21465 1 139250 0 RKGDEVDGVDEVAK EALKKQLPGVKSEGKRKGDEVDGVDEVAKK KRKGDEVDGVDEVAKKKSKKEKDKDSKLEK K R K A K K 1 1 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 14 2 1515.7529 P09874 P09874 208 221 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.0046426 131.79 By MS/MS 4 0 2 2 6375300 6375300 0 12075 521 12874 30428;30429 21466;21467 21467 2 174040 0 RKHDLHK HKLLEAFHNQGPVIKRKHDLHKMAEANRAL HNQGPVIKRKHDLHKMAEANRALAHYRWW_ K R K H K M 0 1 0 1 0 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 0 0 7 2 932.53043 Q9Y2R9 Q9Y2R9 222 228 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 3 0.050533 94.163 By MS/MS 8 0 1 1 47451 47451 0 12076 2899 12875 30430 21468 21468 1 3130.3 0 RKNPAAYENDK YLIYTWGTEEFERSKRKNPAAYENDK____ ERSKRKNPAAYENDK_______________ K R K D K - 2 1 2 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 11 2 1304.6473 O14949 O14949 72 82 UQCRQ Cytochrome b-c1 complex subunit 8 yes yes 2;3 0.0054469 138.25 By MS/MS 10 0 2 2 891690 891690 0 12077 135 12876 30431;30432 21469;21470 21470 2 947770 0 RKPEDVLDDDDAGSAPLK EVLVLVTIIFIYEKRRKPEDVLDDDDAGSA EDVLDDDDAGSAPLKSSGQHQNDKGKNVRQ R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 P35613 P35613 349 366 BSG Basigin yes yes 3 0.0021889 112.91 By MS/MS 7.5 1.12 1 1 1 1 4 7380700 7380700 0 12078 797 12877 30433;30434;30435;30436 21471;21472;21473 21472 3 310680 0 RKQDVVNR RARMVAAANEIAKERRKQDVVNRVATHSSN NEIAKERRKQDVVNRVATHSSNIRSTFKPV R R K N R V 0 2 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 8 2 1013.573 Q8IWC1 Q8IWC1 35 42 MAP7D3 MAP7 domain-containing protein 3 yes yes 3 0.020105 99.442 By MS/MS 3 0 1 1 365820 365820 0 12079 1864 12878 30437 21474 21474 1 9549.8 0 RKQEEALR QEEERKRREEEELARRKQEEALRRQREQEI EEEELARRKQEEALRRQREQEIALRRQREE R R K L R R 1 2 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1028.5727 Q6Y7W6 Q6Y7W6 788 795 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 2.0856E-05 159.28 By MS/MS 3 0 1 1 0 0 0 12080 1736 12879 30438 21475 21475 1 0 0 RKQEELLR ALRRLEERRREEEERRKQEELLRKQEEEAA RREEEERRKQEELLRKQEEEAAKWAREEEE R R K L R K 0 2 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 2 1070.6196 Q6Y7W6 Q6Y7W6 834 841 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 3 0.0059704 123.21 By MS/MS 3.5 0.5 1 1 2 830890 830890 0 12081 1736 12880 30439;30440 21476 21476 1 21756 0 RKTLSEETR EQLKSEQIRAQAEERRKTLSEETRQHQARA AQAEERRKTLSEETRQHQARAQYQDKLARQ R R K T R Q 0 2 0 0 0 0 2 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 9 2 1118.6044 Q5T9A4;Q9NVI7 Q9NVI7 164 172 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.018035 109.44 By MS/MS By matching 6 0.707 1 2 1 3 1 1508700 1503000 5685.6 12082 2655;1634 12881 30441;30442;30443;30444 21477;21478 21478 2 25959 17437 RKVCGDSDK RKFIEDRVKKIIELKRKVCGDSDKGFVVIN KIIELKRKVCGDSDKGFVVINQKGIDPFSL K R K D K G 0 1 0 2 1 0 0 1 0 0 0 2 0 0 0 1 0 0 0 1 0 0 9 2 1063.508 P40227 P40227 279 287 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.0014075 166.09 By MS/MS 6 0.816 1 1 1 3 3728100 3728100 0 12083 828 12882 30445;30446;30447 21479 21479 1 29858 0 RKVDWLTEK ETLTITQAVIFINTRRKVDWLTEKMHARDF IFINTRRKVDWLTEKMHARDFTVSAMHGDM R R K E K M 0 1 0 1 0 0 1 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 9 2 1173.6506 P60842;Q14240;P38919 P60842 283 291 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2;3 0.00074481 166.07 By MS/MS By matching 5.53 2.33 2 2 2 2 4 3 2 2 18 1 1445800000 1445800000 18916 12084 1074;821 12883 30448;30449;30450;30451;30452;30453;30454;30455;30456;30457;30458;30459;30460;30461;30462;30463;30464;30465;30466 21480;21481;21482;21483;21484;21485;21486;21487;21488;21489;21490;21491;21492;21493;21494;21495;21496;21497;21498;21499 21489 20 17629000 58014 RKYDTPK LPSIGIPLLLWYSSKRKYDTPKTKKN____ LLLWYSSKRKYDTPKTKKN___________ K R K P K T 0 1 0 1 0 0 0 0 0 0 0 2 0 0 1 0 1 0 1 0 0 0 7 2 906.49232 P43308 P43308 173 179 SSR2 Translocon-associated protein subunit beta yes yes 3 0.012597 137.18 By MS/MS 9 0 1 1 1459200 1459200 0 12085 864 12884 30467 21500 21500 1 837470 0 RLAQDGAHVVVSSR LVTASTDGIGFAIARRLAQDGAHVVVSSRK RRLAQDGAHVVVSSRKQQNVDQAVATLQGE R R L S R K 2 2 0 1 0 1 0 1 1 0 1 0 0 0 0 2 0 0 0 3 0 0 14 1 1493.8063 Q9BTZ2 Q9BTZ2 51 64 DHRS4 Dehydrogenase/reductase SDR family member 4 yes yes 3 0.029289 70.529 By MS/MS 8 0 1 1 2217200 2217200 0 12086 2358 12885 30468 21501 21501 1 146270 0 RLDDSLLYLR YNPRVQEIQVVKLEKRLDDSLLYLRDALPE VKLEKRLDDSLLYLRDALPEYSTFDVNMKP K R L L R D 0 2 0 2 0 0 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 10 1 1262.6983 P49406 P49406 182 191 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 1.9587E-06 189.18 By MS/MS 8 0 1 1 3152500 3152500 0 12087 917 12886 30469 21502 21502 1 207970 0 RLDEDLAAYCR KITPGARGAFSEEYKRLDEDLAAYCRRRDI EEYKRLDEDLAAYCRRRDIRILVLDDTNHE K R L C R R 2 2 0 2 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 11 1 1380.6456 P09543 P09543 102 112 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 9.812E-06 182.28 By MS/MS 7 0 1 1 0 0 0 12088 516 12887 30470 21503 21503 1 0 0 RLDEEEEDNEGGEWER KREDKAKKKHDRKSKRLDEEEEDNEGGEWE LDEEEEDNEGGEWERVRGGVPLVKEKPKMF K R L E R V 0 2 1 2 0 0 7 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 16 1 1990.8141 Q99613 Q99613 288 303 EIF3C Eukaryotic translation initiation factor 3 subunit C yes yes 3 0.0087321 84.403 By MS/MS 4 0 1 1 596810 596810 0 12089 2275 12888 30471 21504 21504 1 16292 0 RLDEEEEDNEGGEWERVR KREDKAKKKHDRKSKRLDEEEEDNEGGEWE EEEEDNEGGEWERVRGGVPLVKEKPKMFAK K R L V R G 0 3 1 2 0 0 7 2 0 0 1 0 0 0 0 0 0 1 0 1 0 0 18 2 2245.9836 Q99613 Q99613 288 305 EIF3C Eukaryotic translation initiation factor 3 subunit C yes yes 3 0.0050638 89.468 By MS/MS 4 0 1 1 1596300 1596300 0 12090 2275 12889 30472 21505 21505 1 43578 0 RLDEYTQEEIDAFPR KNLVEELPQPRKIPKRLDEYTQEEIDAFPR RLDEYTQEEIDAFPRLWTPPEDYRL_____ K R L P R L 1 2 0 2 0 1 3 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 15 1 1880.8905 Q9BYD1 Q9BYD1 154 168 MRPL13 39S ribosomal protein L13, mitochondrial yes yes 2;3 2.4661E-05 152 By MS/MS 9.33 0.471 2 1 3 1681800 1681800 0 12091 2412 12890 30473;30474;30475 21506;21507;21508 21506 3 985080 0 RLDFDYKK DLKEIQHHLKKLEGRRLDFDYKKKRQGKIP LKKLEGRRLDFDYKKKRQGKIPDEELRQAL R R L K K K 0 1 0 2 0 0 0 0 0 0 1 2 0 1 0 0 0 0 1 0 0 0 8 2 1083.5713 Q99961;Q99962 Q99961 165 172 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 yes no 3 0.03108 83.647 By MS/MS 7 0 1 1 795580 795580 0 12092 2299 12891 30476 21509 21509 1 14217 0 RLDQCPESPLQR PHVEPRPLPSFCPPRRLDQCPESPLQRCPP PPRRLDQCPESPLQRCPPPAPRPRLRPEPC R R L Q R C 0 2 0 1 1 2 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 12 1 1497.7358 Q5T749 Q5T749 387 398 KPRP Keratinocyte proline-rich protein yes yes 2 0.030591 99.343 By matching By MS/MS 4 0 2 1 1 439840 365230 74604 12093 1631 12892 30477;30478 21510 21510 1 9970.5 155890 RLDSSGER PKSSAGSTGRIPGLRRLDSSGERSHRQLID GRIPGLRRLDSSGERSHRQLIDCIRSKDTD R R L E R S 0 2 0 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 8 1 918.45191 Q9ULT8 Q9ULT8 354 361 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.014108 145.16 By MS/MS 2.5 0.5 1 1 2 611460 611460 0 12094 2826 12893 30479;30480 21511 21511 1 29247 0 RLEAEQAR RVAEERTTRREEESRRLEAEQAREKEEQLQ RREEESRRLEAEQAREKEEQLQRQAEERAL R R L A R E 2 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 1 971.51484 Q14244 Q14244 533 540 MAP7 Ensconsin yes yes 2 0.0082134 156.51 By MS/MS 4 0 1 1 1320800 1320800 0 12095 1423 12894 30481 21512 21512 1 36057 0 RLEAFLTQK QKKLEELELDEQQKKRLEAFLTQKAKVGEL DEQQKKRLEAFLTQKAKVGELKDDDFERIS K R L Q K A 1 1 0 0 0 1 1 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 9 1 1104.6291 P36507;Q02750 P36507 53 61 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 yes no 2 0.0081759 128.6 By MS/MS 7 0.816 1 1 1 3 3045500 3045500 0 12096 804 12895 30482;30483;30484 21513 21513 1 57424 0 RLEASRDQLR ERICQELTAAARPFRRLEASRDQLRQLFKD ARPFRRLEASRDQLRQLFKDNPFKLHLIEE R R L L R Q 1 3 0 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 2 1242.6793 Q9BW92 Q9BW92 197 206 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 3 0.054049 72.243 By MS/MS 5 0 1 1 1899200 1899200 0 12097 2391 12896 30485 21514 21514 1 78066 0 RLEEAALRR EKERIMNEEDPEKQRRLEEAALRREQKKLE DPEKQRRLEEAALRREQKKLEKKQMKMKQI R R L R R E 2 3 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 2 1112.6414 Q96A33 Q96A33 455 463 CCDC47 Coiled-coil domain-containing protein 47 yes yes 3 0.052138 76.17 By MS/MS 6 0 1 1 8870600 8870600 0 12098 2114 12897 30486 21515 21515 1 69173 0 RLEEIPLIK LKNQEKKIDYFERAKRLEEIPLIKSAYEEQ YFERAKRLEEIPLIKSAYEEQRIKDMDLWE K R L I K S 0 1 0 0 0 0 2 0 0 2 2 1 0 0 1 0 0 0 0 0 0 0 9 1 1109.6808 Q14152 Q14152 703 711 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.010114 123.21 By MS/MS By matching 3.67 0.745 3 2 1 5 1 30633000 30514000 119170 12099 1409 12898 30487;30488;30489;30490;30491;30492 21516;21517 21516 2 805700 170790 RLEESDVLQEAR KEMKESIKKFRDEARRLEESDVLQEARRKY EARRLEESDVLQEARRKYKTIESETVRTSE R R L A R R 1 2 0 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 12 1 1443.7318 O43615 O43615 90 101 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 7.7705E-16 258.01 By MS/MS By matching 7.33 0.471 4 2 5 1 96484000 96462000 21402 12100 209 12899 30493;30494;30495;30496;30497;30498 21518;21519;21520;21521;21522;21523 21518 6 1938500 87860 RLEESDVLQEARR KEMKESIKKFRDEARRLEESDVLQEARRKY ARRLEESDVLQEARRKYKTIESETVRTSEV R R L R R K 1 3 0 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 13 2 1599.8329 O43615 O43615 90 102 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 3 0.0091627 90.793 By MS/MS 7 0 1 1 15474000 15474000 0 12101 209 12900 30499 21524 21524 1 276530 0 RLEEWLGR QSSQHLFLDLPKLEKRLEEWLGRTLPGSDW DLPKLEKRLEEWLGRTLPGSDWTPNAQFIT K R L G R T 0 2 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 8 1 1057.5669 P56192 P56192 460 467 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0168 139.97 By MS/MS 4 0.816 1 1 1 3 6240200 6240200 0 12102 1042 12901 30500;30501;30502 21525 21525 1 173680 0 RLEIEHSVPK KAIETFSGKVELQGKRLEIEHSVPKKQRSR ELQGKRLEIEHSVPKKQRSRKIQIRNIPPQ K R L P K K 0 1 0 0 0 0 2 0 1 1 1 1 0 0 1 1 0 0 0 1 0 0 10 1 1206.6721 Q9NZI8 Q9NZI8 67 76 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 3 0.031983 78.513 By MS/MS 5 0 1 1 1105700 1105700 0 12103 2711 12902 30503 21526 21526 1 45450 0 RLEIEHSVPKK KAIETFSGKVELQGKRLEIEHSVPKKQRSR LQGKRLEIEHSVPKKQRSRKIQIRNIPPQL K R L K K Q 0 1 0 0 0 0 2 0 1 1 1 2 0 0 1 1 0 0 0 1 0 0 11 2 1334.767 Q9NZI8 Q9NZI8 67 77 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 4 0.048307 60.598 By MS/MS 5 0 1 1 1138100 1138100 0 12104 2711 12903 30504 21527 21527 1 46782 0 RLEPAIQK ______________________________ EEKVKLRRLEPAIQKFIKIVIPTDLERLRK R R L Q K F 1 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 8 1 953.56581 P56962 P56962 12 19 STX17 Syntaxin-17 yes yes 2 0.036621 120.46 By MS/MS 7.5 0.5 1 1 2 1848500 1848500 0 12105 1051 12904 30505;30506 21528 21528 1 99977 0 RLESSGAGGR RETSRFRQQRPLEFRRLESSGAGGRRAEGP PLEFRRLESSGAGGRRAEGPPRLAIQGPED R R L G R R 1 2 0 0 0 0 1 3 0 0 1 0 0 0 0 2 0 0 0 0 0 0 10 1 988.50501 Q15773 Q15773 213 222 MLF2 Myeloid leukemia factor 2 yes yes 2 1.722E-16 232.72 By MS/MS 8 0 1 1 1710000 1710000 0 12106 1520 12905 30507 21529 21529 1 112810 0 RLEVEREAEK HMKAVQADQERERQRRLEVEREAEKKREAK RERQRRLEVEREAEKKREAKQRAKEAQERE R R L E K K 1 2 0 0 0 0 4 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 10 2 1257.6677 Q96AG4 Q96AG4 162 171 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 3 0.047765 109.79 By MS/MS 8.5 0.5 1 1 2 8554700 8554700 0 12107 2121 12906 30508;30509 21530 21530 1 665850 0 RLEYKPIK IRRTSTAPAASPNVRRLEYKPIKKVMVANR AASPNVRRLEYKPIKKVMVANRGEIAIRVF R R L I K K 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 1 0 0 0 8 2 1045.6284 P11498 P11498 31 38 PC Pyruvate carboxylase, mitochondrial yes yes 3 0.0046844 130.56 By MS/MS 4 0.816 1 1 1 3 1817600 1817600 0 12108 555 12907 30510;30511;30512 21531 21531 1 51130 0 RLFEGNALLR KAARELLTLDEKDPRRLFEGNALLRRLVRI EKDPRRLFEGNALLRRLVRIGVLDEGKMKL R R L L R R 1 2 1 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 10 1 1187.6775 P46781 P46781 70 79 RPS9 40S ribosomal protein S9 yes yes 2 0.007425 117.53 By MS/MS 8.5 0.5 1 1 2 3410800 3410800 0 12109 887 12908 30513;30514 21532 21532 1 1654200 0 RLFEQNVQR DPLNKEAAEVLQNNRRLFEQNVQRSMRGGY VLQNNRRLFEQNVQRSMRGGYIGSTYFERC R R L Q R S 0 2 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 1 1188.6364 P61081 P61081 158 166 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.00045718 169.44 By MS/MS 9 0 1 1 649280 649280 0 12110 1086 12909 30515 21533 21533 1 372630 0 RLGDSSLSR ELEIEERERRREEERRLGDSSLSRKDSRWG RREEERRLGDSSLSRKDSRWGDRDSEGTWR R R L S R K 0 2 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 9 1 989.52541 Q14152 Q14152 877 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.003219 145.9 By MS/MS By matching 3.2 0.748 1 2 2 2 3 15176000 14878000 297540 12111 1409 12910 30516;30517;30518;30519;30520 21534;21535 21534 2 390220 446330 RLGLPGDEVDNKVK QRAPLKSVGPDFGKKRLGLPGDEVDNKVKG KRLGLPGDEVDNKVKGAAGRTDLLRLRRRF K R L V K G 0 1 1 2 0 0 1 2 0 0 2 2 0 0 1 0 0 0 0 2 0 0 14 2 1538.8417 P78527 P78527 2704 2717 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.018832 73.802 By MS/MS 1 0 1 1 548760 548760 0 12112 1197 12911 30521 21536 21536 1 26812 0 RLGVEQLR EYETRFLCNSSQEWKRLGVEQLRLSTVDMT NSSQEWKRLGVEQLRLSTVDMTGIPTLDNL K R L L R L 0 2 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 1 969.57196 Q8WUK0 Q8WUK0 89 96 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes yes 2 0.032863 124.08 By MS/MS 9 0 1 1 849710 849710 0 12113 2017 12912 30522 21537 21537 1 487660 0 RLHGLDEEAEQK KTHIDVIHYRKTDAKRLHGLDEEAEQKLFS DAKRLHGLDEEAEQKLFSEKRVELLKELSR K R L Q K L 1 1 0 1 0 1 3 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 12 1 1423.7056 P33991 P33991 428 439 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.00026412 153.49 By MS/MS 4 0 1 1 2647700 2647700 0 12114 773 12913 30523 21538 21538 1 72279 0 RLLAFAEAR RLSVSRWHRRRGVGRRLLAFAEARARAWAG RRGVGRRLLAFAEARARAWAGGMGEPRARL R R L A R A 3 2 0 0 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 9 1 1045.6033 Q8WUY8 Q8WUY8 142 150 NAT14 N-acetyltransferase 14 yes yes 2 0.02576 112.11 By MS/MS 9 0 1 1 1657800 1657800 0 12115 2021 12914 30524 21539 21539 1 951450 0 RLNHYVLYK RFVLRALRMLPSTSRRLNHYVLYKAVQGFF LPSTSRRLNHYVLYKAVQGFFTSNNATRDF R R L Y K A 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 9 1 1204.6717 O43242 O43242 107 115 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 3 0.00053517 136.75 By MS/MS 6 0 1 1 2245700 2245700 0 12116 187 12915 30525 21540 21540 1 17512 0 RLNPNASR ATLQVRDSTLGAGRRRLNPNASRKKFVKKR TLGAGRRRLNPNASRKKFVKKR________ R R L S R K 1 2 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 8 1 926.50461 Q9ULX3 Q9ULX3 398 405 NOB1 RNA-binding protein NOB1 yes yes 2 0.034838 122.18 By MS/MS 7 0 1 1 620010 620010 0 12117 2829 12916 30526 21541 21541 1 11080 0 RLNVTPLAR DGAAALVLMTADAAKRLNVTPLARIVAFAD TADAAKRLNVTPLARIVAFADAAVEPIDFP K R L A R I 1 2 1 0 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 9 1 1038.6298 P24752 P24752 303 311 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 0.0072725 150.36 By MS/MS 6.5 1.12 1 1 1 1 4 55491000 55491000 0 12118 680 12917 30527;30528;30529;30530 21542 21542 1 1038600 0 RLNVWDLSK SPHNETILASSGTDRRLNVWDLSKIGEEQS SSGTDRRLNVWDLSKIGEEQSPEDAEDGPP R R L S K I 0 1 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 0 9 1 1129.6244 Q09028;Q16576 Q09028 341 349 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 0.040114 104.01 By MS/MS 7 0.816 1 1 1 3 28370000 28370000 0 12119 1296;1541 12918 30531;30532;30533 21543 21543 1 239500 0 RLPPIVR ERMKELSQDSTGRVKRLPPIVRGGAIDRYW QDSTGRVKRLPPIVRGGAIDRYWPTADGRL K R L V R G 0 2 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 7 1 849.55486 P52788 P52788 110 116 SMS Spermine synthase yes yes 2 0.044213 150.07 By MS/MS 7.5 0.5 1 1 2 1746500 1746500 0 12120 991 12919 30534;30535 21544 21544 1 39555 0 RLQEELKK R L K K 0 1 0 0 0 1 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 2 1042.6135 REV__O95391 yes yes 3 0.0060471 111.01 By MS/MS 1.67 0.471 1 2 3 260340 260340 0 + 12121 3020 12920 30536;30537;30538 21545 21545 1 12884 0 RLQIEDFEAR IYGHWSIMKWNRERRRLQIEDFEARIALLP NRERRRLQIEDFEARIALLPLLQAETDRRT R R L A R I 1 2 0 1 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1275.6571 Q9P0J0 Q9P0J0 59 68 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 2;3 0.00011307 144.55 By MS/MS 10 0 2 2 1686600 1686600 0 12122 2726 12921 30539;30540 21546;21547 21547 2 1792700 0 RLQSIGTENTEENRR KGILAADESTGSIAKRLQSIGTENTEENRR RLQSIGTENTEENRRFYRQLLLTADDRVNP K R L R R F 0 3 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 15 2 1801.9031 P04075 P04075 43 57 ALDOA Fructose-bisphosphate aldolase A yes yes 3 0.007786 85.909 By MS/MS 8 0.816 1 1 1 3 8265200 8265200 0 12123 444 12922 30541;30542;30543 21548;21549 21549 2 313900 0 RLQSTSER FIQSRGFKTLKSRTRRLQSTSERLAETQNI TLKSRTRRLQSTSERLAETQNIAPSFVKGF R R L E R L 0 2 0 0 0 1 1 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 8 1 975.50976 Q96TA2 Q96TA2 217 224 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.034838 122.18 By MS/MS By matching 6.33 0.471 2 1 2 1 2695500 2685300 10149 12124 2263 12923 30544;30545;30546 21550 21550 1 24179 31127 RLSEFGLIQEK EMTAEYACTRKQFNKRLSEFGLIQEKFALM QFNKRLSEFGLIQEKFALMAQKAYVMESMT K R L E K F 0 1 0 0 0 1 2 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 11 1 1318.7245 Q9H845 Q9H845 335 345 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 3 0.022097 88.134 By MS/MS 3.5 0.5 1 1 2 1772200 1772200 0 12125 2521 12924 30547;30548 21551 21551 1 46497 0 RLTEANQR KEEKNEPLSLPELTKRLTEANQRMAKFPES SLPELTKRLTEANQRMAKFPESIKAWPFPD K R L Q R M 1 2 1 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 1 986.52574 Q8TEQ6 Q8TEQ6 1437 1444 GEMIN5 Gem-associated protein 5 yes yes 2 0.040142 119.21 By MS/MS 3 0 1 1 499430 499430 0 12126 2003 12925 30549 21552 21552 1 13038 0 RLTEEFQNVR LCKTWAGSQSRRLQRRLTEEFQNVRIIKPE RRLQRRLTEEFQNVRIIKPEASRKESSEVY R R L V R I 0 2 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10 1 1290.668 Q9UI43 Q9UI43 207 216 FTSJ2 rRNA methyltransferase 2, mitochondrial yes yes 2 0.00044861 191.45 By MS/MS 8.5 0.5 1 1 2 1069000 1069000 0 12127 2789 12926 30550;30551 21553 21553 1 271330 0 RLTEQKGEQQIQK HQKELAAQLNEEAKRRLTEQKGEQQIQKAR KRRLTEQKGEQQIQKARKSNVSYKNPSLMP R R L Q K A 0 1 0 0 0 4 2 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 13 2 1584.8584 Q9Y5B9 Q9Y5B9 492 504 SUPT16H FACT complex subunit SPT16 yes yes 3 0.037574 65.809 By MS/MS 2.5 1.12 1 1 1 1 4 472340 472340 0 12128 2968 12927 30552;30553;30554;30555 21554 21554 1 18249 0 RLTQAIQK IFYAPYTGVCVKQHKRLTQAIQKARDHGLL VCVKQHKRLTQAIQKARDHGLLIYHIPQVE K R L Q K A 1 1 0 0 0 2 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 1 956.57671 Q9Y676 Q9Y676 149 156 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 0.024561 132.08 By MS/MS 8.5 0.5 1 1 2 3550700 3550700 0 12129 2995 12928 30556;30557 21555 21555 1 263630 0 RLVNSQGQLR VRGHRVIPAALKAFRRLVNSQGQLRVPVVF LKAFRRLVNSQGQLRVPVVFVTNAGNILQH R R L L R V 0 2 1 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 1 1169.6629 Q9BXW7 Q9BXW7 73 82 CECR5 Cat eye syndrome critical region protein 5 yes yes 2;3 0.0029494 140.45 By MS/MS 6.67 0.471 1 2 3 8476600 8476600 0 12130 2404 12929 30558;30559;30560 21556;21557 21556 2 147230 0 RLVPGGGATEIELAK VDDGVNTFKVLTRDKRLVPGGGATEIELAK RLVPGGGATEIELAKQITSYGETCPGLEQY K R L A K Q 2 1 0 0 0 0 2 3 0 1 2 1 0 0 1 0 1 0 0 1 0 0 15 1 1509.8515 P50990 P50990 407 421 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.0068207 125.36 By MS/MS 7 1.22 1 2 2 2 1 8 27073000 27073000 0 12131 955 12930 30561;30562;30563;30564;30565;30566;30567;30568 21558;21559 21559 2 279370 0 RNDHDDDEDEEVISK TDVMVRCLKLLKEFKRNDHDDDEDEEVISK RNDHDDDEDEEVISKTVPPVDIVFERDMLT K R N S K T 0 1 1 5 0 0 3 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 15 1 1814.7555 Q12789 Q12789 341 355 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 2.9893E-05 139.21 By MS/MS 2 0 1 1 237130 237130 0 12132 1306 12931 30569 21560 21560 1 11786 0 RNLADCLR NGYELSPTAAANFTRRNLADCLRSRTPYHV AAANFTRRNLADCLRSRTPYHVNLLLAGYD R R N L R S 1 2 1 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 1016.5185 P49721 P49721 86 93 PSMB2 Proteasome subunit beta type-2 yes yes 2 0.014108 145.16 By MS/MS 9 0.816 1 1 1 3 2653600 2653600 0 12133 927 12932 30570;30571;30572 21561 21561 1 1528300 0 RNLDIERPTYTNLNR CAFMVDNEAIYDICRRNLDIERPTYTNLNR RNLDIERPTYTNLNRLISQIVSSITASLRF R R N N R L 0 3 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 15 2 1873.9759 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 215 229 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 3 0.0033985 104.55 By MS/MS 7 0.816 1 1 1 3 154850000 154850000 0 12134 1185;1754;2314;1186 12933 30573;30574;30575 21562 21562 1 1281400 0 RNLGSINTELQDVQR FIQKTKKLYIDSCARRNLGSINTELQDVQR RNLGSINTELQDVQRIMVANIEEVLQRGEA R R N Q R I 0 2 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 15 1 1741.9071 O75396 O75396 133 147 SEC22B Vesicle-trafficking protein SEC22b yes yes 2;3 3.4514E-09 219.35 By MS/MS 8.5 0.5 2 2 4 3024500 3024500 0 12135 304 12934 30576;30577;30578;30579 21563;21564 21564 2 1397800 0 RPCTIQVPEPILR MYNLASLRELGETQRRPCTIQVPEPILRKI QRRPCTIQVPEPILRKIETFLNHYPVESSW R R P L R K 0 2 0 0 1 1 1 0 0 2 1 0 0 0 3 0 1 0 0 1 0 0 13 1 1577.8712 Q7L2E3 Q7L2E3 344 356 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2;3 0.031824 77.062 By MS/MS 3.33 0.471 2 1 3 3048900 3048900 0 12136 1763 12935 30580;30581;30582 21565;21566 21565 1 80212 0 RPDQQLQGEGK PPVALKKEGIRRVGRRPDQQLQGEGKIIDR RVGRRPDQQLQGEGKIIDRRPERRPPRERR R R P G K I 0 1 0 1 0 3 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 11 1 1254.6317 Q8NC51 Q8NC51 112 122 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 0.0014228 163.84 By MS/MS By matching 6.6 0.8 3 1 1 4 1 13118000 13062000 56567 12137 1949 12936 30583;30584;30585;30586;30587 21567;21568 21567 2 110650 173490 RPEGASNESERD RGGDGQINEQVEKLRRPEGASNESERD___ KLRRPEGASNESERD_______________ R R P R D - 1 2 1 1 0 0 3 1 0 0 0 0 0 0 1 2 0 0 0 0 0 0 12 2 1345.5858 O75381 O75381 366 377 PEX14 Peroxisomal membrane protein PEX14 yes yes 2 0.01512 123.96 By MS/MS 6 0 1 1 618070 618070 0 12138 301 12937 30588 21569 21569 1 4819.7 0 RPELLTHSTTEVTQPR EKIIQVGNRIKFVIKRPELLTHSTTEVTQP PELLTHSTTEVTQPRTNTPVKEDWNVRITK K R P P R T 0 2 0 0 0 1 2 0 1 0 2 0 0 0 2 1 4 0 0 1 0 0 16 1 1863.9803 P78347 P78347 540 555 GTF2I General transcription factor II-I yes yes 3 0.006343 92.575 By MS/MS 3.5 0.5 1 1 2 3344900 3344900 0 12139 1194 12938 30589;30590 21570 21570 1 87748 0 RPELNQPAR RPVLVRPGPLLVSARRPELNQPARLTLGRW LLVSARRPELNQPARLTLGRWERAPLASQG R R P A R L 1 2 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 9 1 1079.5836 Q9NUL7 Q9NUL7 73 81 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.0030829 146.69 By MS/MS By matching 6 0 2 1 1 6184400 6159600 24787 12140 2638 12939 30591;30592 21571 21571 1 48033 76020 RPEVDGEKYQK DLYIDFGGKFHCVCRRPEVDGEKYQKGTRV CVCRRPEVDGEKYQKGTRVRLRLLDLELTS R R P Q K G 0 1 0 1 0 1 2 1 0 0 0 2 0 0 1 0 0 0 1 1 0 0 11 2 1347.6783 Q9Y2Q9 Q9Y2Q9 126 136 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 3 0.00074305 132.5 By MS/MS 9.5 0.5 1 1 2 1464000 1464000 0 12141 2896 12940 30593;30594 21572;21573 21572 2 948320 0 RPGAVATGDIGR FKGQPATHGQTKTHRRPGAVATGDIGRVWP THRRPGAVATGDIGRVWPGTKMPGKMGNIY R R P G R V 2 2 0 1 0 0 0 3 0 1 0 0 0 0 1 0 1 0 0 1 0 0 12 1 1168.6313 P09001 P09001 239 250 MRPL3 39S ribosomal protein L3, mitochondrial yes yes 2;3 0.0076055 135.55 By MS/MS By matching 8 0 4 2 2 3329600 3288200 41455 12142 510 12941 30595;30596;30597;30598 21574;21575 21574 2 216920 353660 RPGYGAYDAFK SLFQRTAWVFDDKYKRPGYGAYDAFKHAVS DKYKRPGYGAYDAFKHAVSDPSILDSLDLN K R P F K H 2 1 0 1 0 0 0 2 0 0 0 1 0 1 1 0 0 0 2 0 0 0 11 1 1243.5986 P05198 P05198 144 154 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.025744 101.38 By MS/MS 7.5 0.5 1 1 2 1588200 1588200 0 12143 471 12942 30599;30600 21576 21576 1 56293 0 RPISSCSQR PPRRSEPIYNSRCPRRPISSCSQRRGPKCR NSRCPRRPISSCSQRRGPKCRIEISSPCCP R R P Q R R 0 2 0 0 1 1 0 0 0 1 0 0 0 0 1 3 0 0 0 0 0 0 9 1 1089.5349 Q5T749 Q5T749 312 320 KPRP Keratinocyte proline-rich protein yes yes 2 0.025222 112.41 By MS/MS By MS/MS 7.67 1.89 1 2 1 2 346390 140080 206320 12144 1631 12943 30601;30602;30603 21577;21578 21577 2 80392 1079200 RPKLPQTSDDEK ENHIIDGVKVQVHTRRPKLPQTSDDEKKDF HTRRPKLPQTSDDEKKDF____________ R R P E K K 0 1 0 2 0 1 1 0 0 0 1 2 0 0 2 1 1 0 0 0 0 0 12 2 1412.726 Q9GZT3 Q9GZT3 95 106 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 3 0.038881 84.169 By MS/MS 10 0 1 1 1078600 1078600 0 12145 2443 12944 30604 21579 21579 1 1146400 0 RPPEPTTPWQEDPEPEDENLYEK SFSRTVVAPSAVAGKRPPEPTTPWQEDPEP WQEDPEPEDENLYEKNPDSHGYDKDPVLDV K R P E K N 0 1 1 2 0 1 6 0 0 0 1 1 0 0 6 0 2 1 1 0 0 0 23 1 2795.2562 Q9NX14 Q9NX14 47 69 NDUFB11 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial yes yes 3 0.0026829 73.11 By MS/MS 9 0 1 1 434250 434250 0 12146 2675 12945 30605 21580 21580 1 249220 0 RPPGVLHCTTK DEPREKMDLVTYFGKRPPGVLHCTTKFCDY YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQ K R P T K F 0 1 0 0 1 0 0 1 1 0 1 1 0 0 2 0 2 0 0 1 0 0 11 1 1264.671 P09543 P09543 245 255 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 3 0.014582 112.84 By MS/MS 6.5 0.5 1 1 2 723980 723980 0 12147 516 12946 30606;30607 21581 21581 1 10197 0 RPTPQDSPIFLPVDDTSFR GLKKSFYGSTLFLCRRPTPQDSPIFLPVDD QDSPIFLPVDDTSFRWVESLKGILADEDSS R R P F R W 0 2 0 3 0 1 0 0 0 1 1 0 0 2 4 2 2 0 0 1 0 0 19 1 2187.096 P49327 P49327 1405 1423 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.0014547 154.72 By MS/MS 3 1.07 1 1 2 3 7 7467700 7467700 0 12148 915 12947 30608;30609;30610;30611;30612;30613;30614 21582;21583;21584;21585;21586;21587 21587 6 215120 0 RQAQQTVR RALVAVLLSRTWHVRRQAQQTVRKLLSSLG SRTWHVRRQAQQTVRKLLSSLGGFKLAHGL R R Q V R K 1 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 8 1 985.54173 Q92616 Q92616 582 589 GCN1L1 Translational activator GCN1 yes yes 2 0.0026008 194.44 By MS/MS 2.5 0.5 1 1 2 368030 368030 0 12149 2068 12948 30615;30616 21588 21588 1 17236 0 RQAVDVSPLRR PREDSTRIGRAGTVRRQAVDVSPLRRVNQA GTVRRQAVDVSPLRRVNQAIWLLCTGAREA R R Q R R V 1 3 0 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 2 1295.7422 P46782 P46782 136 146 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 3 0.013894 92.866 By MS/MS By matching 9 0 2 1 1 3112500 3076200 36323 12150 888 12949 30617;30618 21589 21589 1 1765500 391460 RQDLLNVLAR RVCCEGMLIQLRFLKRQDLLNVLARMMRPV LRFLKRQDLLNVLARMMRPVSDQVQIKVTM K R Q A R M 1 2 1 1 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 10 1 1196.699 Q96A33 Q96A33 227 236 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 1.1882E-10 212.03 By MS/MS 5.5 0.5 1 1 2 9075300 9075300 0 12151 2114 12950 30619;30620 21590 21590 1 74182 0 RQEAIAQNR EFIDSQRVWAEYALKRQEAIAQNRRLTLED AEYALKRQEAIAQNRRLTLEDLEDSWDRGI K R Q N R R 2 2 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 9 1 1084.5738 Q6P2Q9 Q6P2Q9 1393 1401 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0029039 168.26 By MS/MS 2.5 0.5 1 1 2 1301600 1301600 0 12152 1706 12951 30621;30622 21591 21591 1 59556 0 RQFVQSAK SCRLASARTTNPTAKRQFVQSAKEVANSTA TTNPTAKRQFVQSAKEVANSTANLVKTIKA K R Q A K E 1 1 0 0 0 2 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 8 1 962.52976 Q9Y490 Q9Y490 1523 1530 TLN1 Talin-1 yes yes 2 0.007428 158.07 By MS/MS 2.5 0.5 1 1 2 730110 730110 0 12153 2947 12952 30623;30624 21592 21592 1 33463 0 RQGQELSAAR EREEREALERERQRRRQGQELSAARQRLQE ERQRRRQGQELSAARQRLQEDEMRRAAEER R R Q A R Q 2 2 0 0 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 10 1 1114.5843 Q04323 Q04323 126 135 UBXN1 UBX domain-containing protein 1 yes yes 2 0.002941 133.99 By MS/MS 7 0 1 1 828980 828980 0 12154 1262 12953 30625 21593 21593 1 14814 0 RQHEQLR HRKLQARLDQMRKFRRQHEQLRAVIVRVLR LDQMRKFRRQHEQLRAVIVRVLRPQVTAVA R R Q L R A 0 2 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 7 1 965.51551 Q14204 Q14204 471 477 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.022591 110.31 By MS/MS 1.5 0.5 1 1 2 560220 560220 0 12155 1421 12954 30626;30627 21594 21594 1 27418 0 RQNLQEEK KEEEVQQQKLAEERRRQNLQEEKERKLECL KLAEERRRQNLQEEKERKLECLPPEPSPDD R R Q E K E 0 1 1 0 0 2 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1043.536 Q96CS3 Q96CS3 336 343 FAF2 FAS-associated factor 2 yes yes 2 0.026494 130.22 By MS/MS 6 0 1 1 886800 886800 0 12156 2140 12955 30628 21595 21595 1 6915.3 0 RQNLQEEKER KEEEVQQQKLAEERRRQNLQEEKERKLECL AEERRRQNLQEEKERKLECLPPEPSPDDPE R R Q E R K 0 2 1 0 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 10 2 1328.6797 Q96CS3 Q96CS3 336 345 FAF2 FAS-associated factor 2 yes yes 2;3 8.5936E-06 182.46 By MS/MS 6.8 0.748 2 2 1 5 7452100 7452100 0 12157 2140 12956 30629;30630;30631;30632;30633 21596;21597 21597 2 64080 0 RQNTFLVLR HLGQEVTLCGWIQYRRQNTFLVLRDFDGLV GWIQYRRQNTFLVLRDFDGLVQVIIPQDES R R Q L R D 0 2 1 0 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 9 1 1145.6669 Q6PI48 Q6PI48 76 84 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.0061473 134.25 By MS/MS 4.5 0.5 1 1 2 3036200 3036200 0 12158 1715 12957 30634;30635 21598 21598 1 112360 0 RQQEQQVPILEK GGVHISGLHTESAPRRQQEQQVPILEKFCF APRRQQEQQVPILEKFCFTPHTEEGCLSER R R Q E K F 0 1 0 0 0 4 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 12 1 1494.8154 P49327 P49327 1105 1116 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.0096637 113.69 By MS/MS 2.29 1.03 2 2 2 1 7 13078000 13078000 0 12159 915 12958 30636;30637;30638;30639;30640;30641;30642 21599;21600;21601;21602 21600 4 493020 0 RQQQAATSESSQSEASVR ADAIIQMVREGQRARRQQQAATSESSQSEA QAATSESSQSEASVRREESPMDVDQPSPSA R R Q V R R 3 2 0 0 0 4 2 0 0 0 0 0 0 0 0 5 1 0 0 1 0 0 18 1 1948.9199 Q7Z6Z7 Q7Z6Z7 3787 3804 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.0067801 81.51 By MS/MS 1.5 0.5 1 1 2 280050 280050 0 12160 1803 12959 30643;30644 21603 21603 1 13754 0 RQQVEALYR YCRLFQTAITRAKEKRQQVEALYRLQGQKE TRAKEKRQQVEALYRLQGQKEPGDQGPAHP K R Q Y R L 1 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 1 1161.6255 Q9Y399 Q9Y399 264 272 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 2 0.0015507 155.58 By MS/MS 8 0 1 1 3221500 3221500 0 12161 2920 12960 30645 21604 21604 1 212520 0 RREDEYR VEKQTSLTPRELEIRRREDEYRFTKLLQIA TPRELEIRRREDEYRFTKLLQIAGISPHGN R R R Y R F 0 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 7 2 1022.4894 O76031 O76031 230 236 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 3 0.032389 106.42 By MS/MS 5.5 0.5 1 1 2 5131900 5131900 0 12162 344 12961 30646;30647 21605;21606 21605 2 87492 0 RREEEGLQLR KSYKNKSLNPDEMRRRREEEGLQLRKQKRE DEMRRRREEEGLQLRKQKREEQLFKRRNVA R R R L R K 0 3 0 0 0 1 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 2 1284.6898 P52294 P52294 27 36 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 3 0.0033714 110.53 By MS/MS 6 0 1 1 1449900 1449900 0 12163 984 12962 30648 21607 21607 1 11306 0 RRFPLEQR AKYQEKQRKREAEERRRFPLEQRLKEHIIG KREAEERRRFPLEQRLKEHIIGQESAIATV R R R Q R L 0 3 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 8 2 1100.6203 Q9H078 Q9H078 335 342 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.0017076 166.68 By MS/MS 7 0.816 1 1 1 3 8581300 8581300 0 12164 2448 12963 30649;30650;30651 21608 21608 1 73875 0 RRVDQLK HNLEPYFESFINNLRRRVDQLKSDQSRLDS ESFINNLRRRVDQLKSDQSRLDSELKNMQD R R R L K S 0 2 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 2 913.54575 P04264;CON__P04264 P04264 240 246 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.018959 116.54 By MS/MS By MS/MS 6.33 3.53 2 1 1 1 2 2 4 5 6480200 5020000 1460200 + 12165 450;45 12964 30652;30653;30654;30655;30656;30657;30658;30659;30660 21609;21610;21611;21612;21613 21612 5 2416900 6602900 RSASASHQADIK RSRSRSPGRPPKSARRSASASHQADIKEAR SARRSASASHQADIKEARREVEVKLTPLIL R R S I K E 3 1 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 12 1 1269.6426 Q14739 Q14739 96 107 LBR Lamin-B receptor yes yes 3 0.053302 67.997 By MS/MS 1 0 1 1 139090 139090 0 12166 1445 12965 30661 21614 21614 1 6795.6 0 RSAVPPGADK PARLTRGEADRDTYRRSAVPPGADKKAEAG RDTYRRSAVPPGADKKAEAGAGSATEFQFR R R S D K K 2 1 0 1 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 10 1 996.53524 P46783 P46783 129 138 RPS10 40S ribosomal protein S10 yes yes 2 0.0061449 135.8 By MS/MS 9 0 1 1 157410 157410 0 12167 889 12966 30662 21615 21615 1 90336 0 RSDSVSASER WEAFLNAPEANRGLRRSDSVSASERAGPSR NRGLRRSDSVSASERAGPSRARHFSEHPST R R S E R A 1 2 0 1 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 10 1 1092.516 O43719 O43719 384 393 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.053532 86.898 By MS/MS 4 0 1 1 135600 135600 0 12168 218 12967 30663 21616 21616 0 3701.8 0 RSDYDREALLGVQEDVDEYVK GAGKAEELHYPLGERRSDYDREALLGVQED EALLGVQEDVDEYVKLGHEEQQKRLQAIIK R R S V K L 1 2 0 4 0 1 3 1 0 0 2 1 0 0 0 1 0 0 2 3 0 0 21 2 2498.1925 Q14257 Q14257 36 56 RCN2 Reticulocalbin-2 yes yes 3 0.00064676 95.414 By MS/MS 6 0 1 1 3407200 3407200 0 12169 1426 12968 30664 21617 21617 1 26570 0 RSENEEFVEVGR EFFIILEGSAAVLQRRSENEEFVEVGRLGP LQRRSENEEFVEVGRLGPSDYFGEIALLMN R R S G R L 0 2 1 0 0 0 4 1 0 0 0 0 0 1 0 1 0 0 0 2 0 0 12 1 1449.6848 P10644 P10644 306 317 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 6.5586E-16 219.92 By MS/MS 7 0.816 1 1 1 3 8022000 8022000 0 12170 542 12969 30665;30666;30667 21618 21618 1 75684 0 RSEPIYNSR LRPSEGFPNYCTPPRRSEPIYNSRCPRRPI YCTPPRRSEPIYNSRCPRRPISSCSQRRGP R R S S R C 0 2 1 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 1 1120.5625 Q5T749 Q5T749 300 308 KPRP Keratinocyte proline-rich protein yes yes 2 0.0055908 128.91 By matching By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 3 7 2966500 954610 2011800 12171 1631 12970 30668;30669;30670;30671;30672;30673;30674;30675;30676;30677 21619;21620;21621;21622;21623 21620 5 350990 4658800 RSIQFVDWCPTGFK VPKDVNAAIATIKTKRSIQFVDWCPTGFKV KRSIQFVDWCPTGFKVGINYQPPTVVPGGD K R S F K V 0 1 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 14 1 1739.8454 P68363;P68366 P68363 339 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 2;3 0.0003209 153.81 By MS/MS 6 0 2 2 25335000 25335000 0 12172 1185;1186 12971 30678;30679 21624;21625 21624 2 197560 0 RSLHDALCVIR IFIRGGNKMIIEEAKRSLHDALCVIRNLIR EEAKRSLHDALCVIRNLIRDNRVVYGGGAA K R S I R N 1 2 0 1 1 0 0 0 1 1 2 0 0 0 0 1 0 0 0 1 0 0 11 1 1338.719 P48643 P48643 400 410 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.0028288 105.03 By MS/MS 6 0 1 1 4571700 4571700 0 12173 909 12972 30680 21626 21626 1 35650 0 RSLQAQLQR DCLDRTNVIQSLLARRSLQAQLQRLGVLHV QSLLARRSLQAQLQRLGVLHVGQKLEEQDE R R S Q R L 1 2 0 0 0 3 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 1 1098.6258 Q9NTJ5 Q9NTJ5 406 414 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.020817 114.89 By MS/MS 1 0 1 1 236100 236100 0 12174 2631 12973 30681 21627 21627 1 11536 0 RSQQGPR PGGELPRGPAGLGPRRSQQGPRKEPRKIIA GPAGLGPRRSQQGPRKEPRKIIATVLMTED R R S P R K 0 2 0 0 0 2 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 7 1 827.4362 Q04637 Q04637 703 709 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.040861 152.47 By MS/MS 2.5 0.5 1 1 2 803500 803500 0 12175 1264 12974 30682;30683 21628 21628 1 38436 0 RSTSSFSCLSR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS R R S S R H 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 0 11 1 1286.6037 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 35 45 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.014553 112.94 By matching By MS/MS 5.14 3 2 1 1 1 1 1 3 4 950930 529380 421550 + 12176 52 12975 30684;30685;30686;30687;30688;30689;30690 21629;21630 21630 2 110370 882840 RTAQEVETYRR KFEKNFYQEHPDLARRTAQEVETYRRSKEI DLARRTAQEVETYRRSKEITVRGHNCPKPV R R T R R S 1 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 11 2 1407.7219 P17844 P17844 68 78 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 3 0.02339 83.137 By MS/MS 5 0 1 1 1676100 1676100 0 12177 616 12976 30691 21631 21631 1 68896 0 RTDALTSSPGR RGNDPLTSSPGRSSRRTDALTSSPGRDLPP RSSRRTDALTSSPGRDLPPFEDESEGLLGT R R T G R D 1 2 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 1 1159.5945 P49736 P49736 34 44 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.0052149 129 By MS/MS 4 0 1 1 699020 699020 0 12178 928 12977 30692 21632 21632 1 19083 0 RTDEATFSK GGDGTLQEVVTGVLRRTDEATFSKIPIGFI VTGVLRRTDEATFSKIPIGFIPLGETSSLS R R T S K I 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 1 2 0 0 0 0 0 9 1 1053.5091 Q53H12 Q53H12 138 146 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.01128 120.27 By MS/MS By matching 7.33 0.471 2 1 2 1 18572000 18552000 20387 12179 1587 12978 30693;30694;30695 21633 21633 1 357230 83694 RTDIFGVEETAIGKK PGLDIESSLKQLAERRTDIFGVEETAIGKK RTDIFGVEETAIGKKIGEEEIQKPEEKVTW R R T K K I 1 1 0 1 0 0 2 2 0 2 0 2 0 1 0 0 2 0 0 1 0 0 15 2 1662.8941 Q15459 Q15459 473 487 SF3A1 Splicing factor 3A subunit 1 yes yes 3 0.027898 87.429 By MS/MS 4 0 1 1 1256500 1256500 0 12180 1504 12979 30696 21634 21634 0 34302 0 RTEELPLGR AVGSAFYTIWSGWHRRTEELPLGRELRVPL WSGWHRRTEELPLGRELRVPLIGSLPEARL R R T G R E 0 2 0 0 0 0 2 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 1 1069.588 Q9NXS2 Q9NXS2 58 66 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes yes 2 0.0032501 145.72 By MS/MS 7 0 1 1 4420400 4420400 0 12181 2692 12980 30697 21635 21635 1 78994 0 RTETTVKK MSVVSVETSDDGTTRRTETTVKKVVKTVTT SDDGTTRRTETTVKKVVKTVTTRTVQPVAM R R T K K V 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 3 0 0 1 0 0 8 2 961.55564 O60716 O60716 136 143 CTNND1 Catenin delta-1 yes yes 3 0.034353 91.265 By MS/MS 4 0 1 1 182650 182650 0 12182 260 12981 30698 21636 21636 1 4986 0 RTGAIVDVPVGEELLGR VFGNDKLIKEGDIVKRTGAIVDVPVGEELL GAIVDVPVGEELLGRVVDALGNAIDGKGPI K R T G R V 1 2 0 1 0 0 2 3 0 1 2 0 0 0 1 0 1 0 0 3 0 0 17 1 1779.9843 P25705 P25705 133 149 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 3 6.3791E-05 135.23 By MS/MS 6 0 1 1 7934900 7934900 0 12183 687 12982 30699 21637 21637 1 61877 0 RTGVQTFR SNSEDKSIRVWDMSKRTGVQTFRRDHDRFW RVWDMSKRTGVQTFRRDHDRFWVLAAHPNL K R T F R R 0 2 0 0 0 1 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 8 1 963.52501 P53621 P53621 281 288 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.026494 130.22 By MS/MS 2 0.816 1 1 1 3 1395100 1395100 0 12184 1005 12983 30700;30701;30702 21638 21638 1 49563 0 RTMMLLAQMR SLDCDLPQTHSLGHRRTMMLLAQMRRISLF SLGHRRTMMLLAQMRRISLFSCLKDRHDFR R R T M R R 1 2 0 0 0 1 0 0 0 0 2 0 3 0 0 0 1 0 0 0 0 0 10 1 1249.6457 P05013 P05013 36 45 IFNA6 Interferon alpha-6 yes yes 2 0.041348 61.962 By MS/MS 3 0 1 1 167830 167830 0 12185 462 12984 30703 21639 21639 245;246 1 4381.2 0 RTPVIDADKPVSSQLR DIHYGVKSNSLAFIKRTPVIDADKPVSSQL TPVIDADKPVSSQLRVLTLSEDSPYETLHS K R T L R V 1 2 0 2 0 1 0 0 0 1 1 1 0 0 2 2 1 0 0 2 0 0 16 2 1780.9795 Q14204 Q14204 121 136 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.014595 79.471 By MS/MS 1 0 1 1 478570 478570 0 12186 1421 12985 30704 21640 21640 1 23382 0 RTSSAQVEGGVHSLHSYEK QVRAMMYSGELKFEKRTSSAQVEGGVHSLH AQVEGGVHSLHSYEKRLF____________ K R T E K R 1 1 0 0 0 1 2 2 2 0 1 1 0 0 0 4 1 0 1 2 0 0 19 1 2071.0083 P12268 P12268 493 511 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 4 0.021298 54.974 By MS/MS 6 0 1 1 1246400 1246400 0 12187 564 12986 30705 21641 21641 1 9719.3 0 RTVVDSEGR SVTKITKPDGIVEERRTVVDSEGRTETTVT GIVEERRTVVDSEGRTETTVTRHEADSSPR R R T G R T 0 2 0 1 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 2 0 0 9 1 1017.5203 O00165 O00165 227 235 HAX1 HCLS1-associated protein X-1 yes yes 2 0.030493 109.44 By MS/MS 8 0 1 1 1966000 1966000 0 12188 73 12987 30706 21642 21642 1 129700 0 RTVVDSEGRTETTVTR SVTKITKPDGIVEERRTVVDSEGRTETTVT TVVDSEGRTETTVTRHEADSSPRGDPESPR R R T T R H 0 3 0 1 0 0 2 1 0 0 0 0 0 0 0 1 5 0 0 3 0 0 16 2 1805.9232 O00165 O00165 227 242 HAX1 HCLS1-associated protein X-1 yes yes 3 0.011859 81.526 By MS/MS 8 0 1 1 5467200 5467200 0 12189 73 12988 30707 21643 21643 1 360670 0 RVDQLKSDQSR NLEPYFESFINNLRRRVDQLKSDQSRLDSE NLRRRVDQLKSDQSRLDSELKNMQDMVEDY R R V S R L 0 2 0 2 0 2 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 2 1330.6953 P04264;CON__P04264 P04264 241 251 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 7.0338E-06 180.66 By MS/MS By MS/MS 6.38 2.84 1 1 2 2 1 1 3 2 7 6 8853800 4053400 4800400 + 12190 450;45 12989 30708;30709;30710;30711;30712;30713;30714;30715;30716;30717;30718;30719;30720 21644;21645;21646;21647;21648;21649;21650 21649 7 2126800 10833000 RVEDEAQGR YFPALHRFILLYQARRVEDEAQGRELVFAL LLYQARRVEDEAQGRELVFALWQQLGAVLK R R V G R E 1 2 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 9 1 1058.5105 Q562E7 Q562E7 891 899 WDR81 WD repeat-containing protein 81 yes yes 2 0.0089986 126.31 By MS/MS By matching 1.5 0.5 1 1 1 1 176750 102940 73810 12191 1592 12990 30721;30722 21651 21651 1 5116.9 73810 RVEHHDHAVVSGR AGDAACFYDIKLGRRRVEHHDHAVVSGRLA RRRVEHHDHAVVSGRLAGENMTGAAKPYWH R R V G R L 1 2 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 3 0 0 13 1 1497.7549 O95831 O95831 451 463 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;4 5.0208E-05 195.72 By MS/MS 5.5 0.5 2 2 4 4323400 4323400 0 12192 409 12991 30723;30724;30725;30726 21652;21653 21653 2 121610 0 RVEILNEHR IGCGRLNEPIKVLCRRVEILNEHRGEKLNR IKVLCRRVEILNEHRGEKLNRVKMVEKEKD R R V H R G 0 2 1 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 9 1 1164.6364 Q9NTJ3 Q9NTJ3 273 281 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.023029 86.882 By MS/MS 3 0 1 1 560470 560470 0 12193 2630 12992 30727 21654 21654 1 14631 0 RVEILNEHRGEK IGCGRLNEPIKVLCRRVEILNEHRGEKLNR LCRRVEILNEHRGEKLNRVKMVEKEKDALE R R V E K L 0 2 1 0 0 0 3 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 12 2 1478.7954 Q9NTJ3 Q9NTJ3 273 284 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.047486 66.326 By MS/MS 3 0 1 1 704460 704460 0 12194 2630 12993 30728 21655 21655 1 18390 0 RVENSIPAAGETQNVEVAAGPAGK KEWGDDEEEQPSKRRRVENSIPAAGETQNV GETQNVEVAAGPAGKCAAVDVEPPSKQKEK R R V G K C 5 1 2 0 0 1 3 3 0 1 0 1 0 0 2 1 1 0 0 3 0 0 24 1 2364.2034 Q15020 Q15020 646 669 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 3 7.4528E-05 92.428 By MS/MS 3 0 1 1 1640400 1640400 0 12195 1463 12994 30729 21656 21656 1 42822 0 RVFITDDFHDMMPK EYGSKKSDYIKLYVRRVFITDDFHDMMPKY RRVFITDDFHDMMPKYLNFVKGVVDSDDLP R R V P K Y 0 1 0 3 0 0 0 0 1 1 0 1 2 2 1 0 1 0 0 1 0 0 14 1 1750.8171 P14625 P14625 415 428 HSP90B1 Endoplasmin yes yes 3 0.034418 51.643 By MS/MS 4 0 1 1 690250 690250 0 12196 589 12995 30730 21657 21657 381;382 1 18843 0 RVHEGSQK QEFRSRCSSVTGVQRRVHEGSQKSQPRRRH SVTGVQRRVHEGSQKSQPRRRHASAPSHVQ R R V Q K S 0 1 0 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 8 1 939.48863 O60343 O60343 325 332 TBC1D4 TBC1 domain family member 4 yes yes 3 0.047781 81.548 By MS/MS 3 0 1 1 7119.9 7119.9 0 12197 246 12996 30731 21658 21658 1 185.86 0 RVHELER YQLSKLGVSLVLSARRVHELERVKRRCLEN VSLVLSARRVHELERVKRRCLENGNLKEKD R R V E R V 0 2 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 7 1 937.50936 Q9Y394 Q9Y394 83 89 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 3 0.051731 91.069 By MS/MS 8 0 1 1 1294800 1294800 0 12198 2919 12997 30732 21659 21659 1 85420 0 RVHVTQEDFEMAVAK KGVCTEAGMYALRERRVHVTQEDFEMAVAK RVHVTQEDFEMAVAKVMQKDSEKNMSIKKL R R V A K V 2 1 0 1 0 1 2 0 1 0 0 1 1 1 0 0 1 0 0 3 0 0 15 1 1758.8723 P62195 P62195 375 389 PSMC5 26S protease regulatory subunit 8 yes yes 3 0.0010886 120.29 By MS/MS 7 0 1 1 4972300 4972300 0 12199 1117 12998 30733 21660 21660 870 1 88855 0 RVLDELTLTK VALRQSVEADINGLRRVLDELTLTKADLEM INGLRRVLDELTLTKADLEMQIESLTEELA R R V T K A 0 1 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 10 1 1186.6921 CON__P13645;P13645 CON__P13645 257 266 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.023978 103.55 By MS/MS 6 0 1 1 73436 0 73436 + 12200 49 12999 30734 21661 21661 1 0 225220 RVLGLLER AQLDAISEKVDVIAKRVLGLLERSSMSLTQ KVDVIAKRVLGLLERSSMSLTQDMLNGELK K R V E R S 0 2 0 0 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 1 954.59745 Q5JPH6 Q5JPH6 448 455 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.036069 132.76 By MS/MS 6 0 1 1 7378400 7378400 0 12201 1604 13000 30735 21662 21662 1 57537 0 RVLLGETGKEK ERAYQKQPTIFQNKKRVLLGETGKEKLPRY QNKKRVLLGETGKEKLPRYYKNIGLGFKTP K R V E K L 0 1 0 0 0 0 2 2 0 0 2 2 0 0 0 0 1 0 0 1 0 0 11 2 1228.7139 P62280 P62280 22 32 RPS11 40S ribosomal protein S11 yes yes 3 0.0034509 107.09 By MS/MS 9 0 1 1 275680 275680 0 12202 1127 13001 30736 21663 21663 1 158220 0 RVLQALEGLK VMPSHFSRGSKSVARRVLQALEGLKMVEKD KSVARRVLQALEGLKMVEKDQDGGRKLTPQ R R V L K M 1 1 0 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 10 1 1125.687 P39019 P39019 102 111 RPS19 40S ribosomal protein S19 yes yes 2;3 0.018334 128.6 By MS/MS 10 0 2 2 3406100 3406100 0 12203 823 13002 30737;30738 21664;21665 21664 2 3620300 0 RVPDHHPC VILRVDNIIKAAPRKRVPDHHPC_______ IKAAPRKRVPDHHPC_______________ K R V P C - 0 1 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 1 0 0 8 1 1016.461 P78371 P78371 528 535 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.013046 128.82 By MS/MS By matching 6 0 3 2 1 5377900 5368300 9539.5 12204 1195 13003 30739;30740;30741 21666;21667 21667 2 41862 29257 RVPPPALSR DDRKDDRVEERDPPRRVPPPALSRDRERDR ERDPPRRVPPPALSRDRERDRDREREGEKE R R V S R D 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 9 1 991.5927 Q14152 Q14152 1329 1337 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.040037 104.06 By MS/MS By matching 6.11 2.42 2 1 1 1 1 1 1 1 8 1 11179000 11156000 23053 12205 1409 13004 30742;30743;30744;30745;30746;30747;30748;30749;30750 21668;21669 21668 2 530980 33040 RVSELSAPR MTYEWLKNIFTPEGKRVSELSAPRILVAGG FTPEGKRVSELSAPRILVAGGIAGIFNWAV K R V P R I 1 2 0 0 0 0 1 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 9 1 1013.5618 O43772 O43772 203 211 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0099202 123.75 By MS/MS 8.5 0.5 1 1 2 4747600 4747600 0 12206 222 13005 30751;30752 21670 21670 1 412880 0 RVVVYGGEGDNLKK LLLTVDTTDDNFMPKRVVVYGGEGDNLKKL KRVVVYGGEGDNLKKLSDVSIDETLIGDVC K R V K K L 0 1 1 1 0 0 1 3 0 0 1 2 0 0 0 0 0 0 1 3 0 0 14 2 1532.8311 Q5T447 Q5T447 309 322 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 3 0.01171 83.54 By MS/MS 4.5 0.5 1 1 2 549590 549590 0 12207 1626 13006 30753;30754 21671 21671 1 16526 0 RWEVADLQPQLK LMEFLLNVTTAPEFRRWEVADLQPQLKIDK EFRRWEVADLQPQLKIDKAVAFQNPQTHVI R R W L K I 1 1 0 1 0 2 1 0 0 0 2 1 0 0 1 0 0 1 0 1 0 0 12 1 1481.7991 P22695 P22695 148 159 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2;3 0.0062563 120.86 By MS/MS 6.67 0.471 1 2 3 6037300 6037300 0 12208 662 13007 30755;30756;30757 21672;21673 21673 2 103960 0 RYAHVVLR RKIAFAITAIKGVGRRYAHVVLRKADIDLT AIKGVGRRYAHVVLRKADIDLTKRAGELTE R R Y L R K 1 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 8 1 1012.593 P62269 P62269 39 46 RPS18 40S ribosomal protein S18 yes yes 3 0.053996 71.379 By MS/MS 9.5 0.5 1 1 2 248850 248850 0 12209 1124 13008 30758;30759 21674 21674 1 196560 0 RYDDPEVQKDIK NPNNTFYATKRLIGRRYDDPEVQKDIKNVP IGRRYDDPEVQKDIKNVPFKIVRASNGDAW R R Y I K N 0 1 0 3 0 1 1 0 0 1 0 2 0 0 1 0 0 0 1 1 0 0 12 2 1504.7522 P38646 P38646 127 138 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3;4 2.5447E-32 265 By MS/MS By matching 5 0 4 3 1 35089000 34964000 124960 12210 820 13009 30760;30761;30762;30763 21675;21676;21677 21676 3 1437200 369740 RYGDFFIR IDKDMIHIADTKVARRYGDFFIRQIHKFEE ADTKVARRYGDFFIRQIHKFEELNRTLKKM R R Y I R Q 0 2 0 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 1 0 0 0 8 1 1072.5454 Q9Y262 Q9Y262 538 545 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.020221 136.27 By MS/MS 5.5 0.5 1 1 2 15351000 15351000 0 12211 2868 13010 30764;30765 21678 21678 1 216980 0 RYNIPHGPVVGSTR NYADLSDTELTTLLRRYNIPHGPVVGSTRR RRYNIPHGPVVGSTRRLYEKKIFEYETQRR R R Y T R R 0 2 1 0 0 0 0 2 1 1 0 0 0 0 2 1 1 0 1 2 0 0 14 1 1551.827 P50402 P50402 18 31 EMD Emerin yes yes 3 0.022588 65.219 By MS/MS 8 0 1 1 1858700 1858700 0 12212 945 13011 30766 21679 21679 1 122620 0 RYPSGEER KGPLSPRFRGEHALRRYPSGEERCIACKLC RGEHALRRYPSGEERCIACKLCEAICPAQA R R Y E R C 0 2 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 8 1 992.46756 O00217 O00217 103 110 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 2 0.021733 134.81 By MS/MS By matching 9.33 0.471 2 1 2 1 2400900 2388700 12163 12213 79 13012 30767;30768;30769 21680 21680 1 1397600 131080 SAADSISESVPVGPK DDLDAEAAMDISEGRSAADSISESVPVGPK SAADSISESVPVGPKVRDGPGKYQLFAFIS R S A P K V 2 0 0 1 0 0 1 1 0 1 0 1 0 0 2 4 0 0 0 2 0 0 15 0 1442.7253 P45974 P45974 779 793 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 2.2961E-14 250.7 By MS/MS 4.5 0.5 1 1 2 1864500 1864500 0 12214 873 13013 30770;30771 21681 21681 1 53542 0 SAAETVTK FRKFLPLFDRVLVERSAAETVTKGGIMLPE DRVLVERSAAETVTKGGIMLPEKSQGKVLQ R S A T K G 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 2 0 0 1 0 0 8 0 805.41815 P61604 P61604 21 28 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.0089976 122.19 By MS/MS By matching 10 0 2 1 1 705590 655840 49754 12215 1102 13014 30772;30773 21682 21682 1 697090 1276200 SAAPSTLDSSSTAPAQLGK QQQLEKELNTLRVTRSAAPSTLDSSSTAPA STLDSSSTAPAQLGKKGKEFEFSQLPLKVE R S A G K K 4 0 0 1 0 1 0 1 0 0 2 1 0 0 2 5 2 0 0 0 0 0 19 0 1787.8901 Q9Y5M8 Q9Y5M8 209 227 SRPRB Signal recognition particle receptor subunit beta yes yes 2 3.2297E-11 195.71 By MS/MS 9 0.816 1 1 1 3 9525800 9525800 0 12216 2976 13015 30774;30775;30776 21683;21684 21683 2 3393800 0 SAAPSTLDSSSTAPAQLGKK QQQLEKELNTLRVTRSAAPSTLDSSSTAPA TLDSSSTAPAQLGKKGKEFEFSQLPLKVEF R S A K K G 4 0 0 1 0 1 0 1 0 0 2 2 0 0 2 5 2 0 0 0 0 0 20 1 1915.9851 Q9Y5M8 Q9Y5M8 209 228 SRPRB Signal recognition particle receptor subunit beta yes yes 2 0.00044774 119.17 By MS/MS 8.5 0.5 1 1 2 2032600 2032600 0 12217 2976 13016 30777;30778 21685;21686 21685 2 280340 0 SAAQAAAQTNSNAAGK KKEAGGGGVGGPGAKSAAQAAAQTNSNAAG AAQAAAQTNSNAAGKQLRKESQKDRKNPLP K S A G K Q 7 0 2 0 0 2 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 16 0 1459.7015 Q8NC51 Q8NC51 53 68 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 2.5576E-92 333.44 By MS/MS By MS/MS 7.67 1.49 2 1 1 1 1 5 1 23522000 23345000 176620 12218 1949 13017 30779;30780;30781;30782;30783;30784 21687;21688;21689 21688 3 292870 541670 SAATSGAGSTTSGVVSGSLGSR EDPCTLRHTMEKVVRSAATSGAGSTTSGVV GSTTSGVVSGSLGSREINYILRVLGPAACR R S A S R E 3 1 0 0 0 0 0 5 0 0 1 0 0 0 0 7 3 0 0 2 0 0 22 0 1895.9185 Q7Z6Z7 Q7Z6Z7 1844 1865 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2;3 1.6613E-32 215.93 By MS/MS 1.75 0.829 2 1 1 4 1698600 1698600 0 12219 1803 13018 30785;30786;30787;30788 21690;21691;21692 21690 3 79654 0 SACDTVDTWLDDTAK LGWSKKYEFGESDLRSACDTVDTWLDDTAK SACDTVDTWLDDTAKGRQNISPDKIPWSAL R S A A K G 2 0 0 4 1 0 0 0 0 0 1 1 0 0 0 1 3 1 0 1 0 0 15 0 1696.725 Q14204 Q14204 4214 4228 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00016406 134.49 By MS/MS 2.5 1.12 1 1 1 1 4 489740 489740 0 12220 1421 13019 30789;30790;30791;30792 21693 21693 1 17747 0 SACEQFIQQQTK EHYLDSKKDVDRHLKSACEQFIQQQTKLFV HLKSACEQFIQQQTKLFVEQLEEFMTKVSA K S A T K L 1 0 0 0 1 4 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 12 0 1466.6824 Q96JB2 Q96JB2 695 706 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 7.4578E-17 227.36 By MS/MS 4.5 0.5 1 1 2 1340600 1340600 0 12221 2205 13020 30793;30794 21694 21694 1 44038 0 SACGVCPGR RIVYLYTKKVGKAPKSACGVCPGRLRGVRA VGKAPKSACGVCPGRLRGVRAVRPKVLMRL K S A G R L 1 1 0 0 2 0 0 2 0 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 962.40622 P49207 P49207 44 52 RPL34 60S ribosomal protein L34 yes yes 2 0.0045213 120.46 By MS/MS 10 0 1 1 0 0 0 12222 914 13021 30795 21695 21695 1 0 0 SADFAELEVLR EQLAGVGQGRLAQERSADFAELEVLRQREM AQERSADFAELEVLRQREMAEKKTRALQRG R S A L R Q 2 1 0 1 0 0 2 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 11 0 1248.635 Q9UNS1 Q9UNS1 247 257 TIMELESS Protein timeless homolog yes yes 2 0.0011105 144.65 By MS/MS 3 0 1 1 1225300 1225300 0 12223 2846 13022 30796 21696 21696 1 31985 0 SADGSAPAGEGEGVTLQR AEEKEEAREKMLAAKSADGSAPAGEGEGVT GSAPAGEGEGVTLQRNITLLNGVAIIVGTI K S A Q R N 3 1 0 1 0 1 2 4 0 0 1 0 0 0 1 2 1 0 0 1 0 0 18 0 1700.7966 Q01650 Q01650 31 48 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 2 1.2265E-33 242.4 By MS/MS 4.29 2.37 1 1 1 1 1 1 1 7 6409400 6409400 0 12224 1243 13023 30797;30798;30799;30800;30801;30802;30803 21697;21698;21699 21699 3 169570 0 SADPEVMLLTLSLYK IQEALNCLVKALDIKSADPEVMLLTLSLYK SADPEVMLLTLSLYKQLNNN__________ K S A Y K Q 1 0 0 1 0 0 1 0 0 0 4 1 1 0 1 2 1 0 1 1 0 0 15 0 1678.8852 Q2NKX8 Q2NKX8 1231 1245 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.012457 81.709 By MS/MS 3 0 1 1 63985 63985 0 12225 1559 13024 30804 21700;21701 21701 1176 2 1670.3 0 SADTLWDIQK INQKLKDDEVAQLKKSADTLWDIQKDLKDL AQLKKSADTLWDIQKDLKDL__________ K S A Q K D 1 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 10 0 1175.5823 P07195 P07195 320 329 LDHB L-lactate dehydrogenase B chain yes yes 2 7.6838E-05 168.26 By MS/MS 8 0 1 1 1245500 1245500 0 12226 486 13025 30805 21702 21702 1 82168 0 SAEAGIAGEAQSK AAAVVRAAVSASRAKSAEAGIAGEAQSKKP AKSAEAGIAGEAQSKKPVSRPATAAAAAAG K S A S K K 4 0 0 0 0 1 2 2 0 1 0 1 0 0 0 2 0 0 0 0 0 0 13 0 1217.5888 Q7Z478 Q7Z478 27 39 DHX29 ATP-dependent RNA helicase DHX29 yes yes 2 0.001952 120.03 By MS/MS 3 0 1 1 255550 255550 0 12227 1791 13026 30806 21703 21703 1 6671.2 0 SAEAYENFLR GTESLFFDKVRKALRSAEAYENFLRCLVIF RKALRSAEAYENFLRCLVIFNQEVISRAEL R S A L R C 2 1 1 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 10 0 1198.5619 Q96ST3 Q96ST3 476 485 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.012683 103.88 By MS/MS 3 0 1 1 399980 399980 0 12228 2256 13027 30807 21704 21704 1 10441 0 SAEEAASVLATSISPEQCIK KTLEAHKDPHKEVVRSAEEAASVLATSISP ASVLATSISPEQCIKVLCPIIQTADYPINL R S A I K V 4 0 0 0 1 1 3 0 0 2 1 1 0 0 1 4 1 0 0 1 0 0 20 0 2090.0201 O75122 O75122 1162 1181 CLASP2 CLIP-associating protein 2 yes yes 2 3.0282E-12 161.49 By MS/MS 3 0 1 1 875680 875680 0 12229 279 13028 30808 21705 21705 1 22860 0 SAEELKEMQDK YIAYQFLLAEDTKVRSAEELKEMQDKVIKL TKVRSAEELKEMQDKVIKLQEELSENDKKI R S A D K V 1 0 0 1 0 1 3 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 11 1 1306.6075 O95347 O95347 249 259 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.00063852 163.88 By MS/MS 3 0 1 1 685240 685240 0 12230 385 13029 30809 21706 21706 1 17888 0 SAELLLGK IPEHLMGKLGPNGERSAELLLGKSKGKQAP LGPNGERSAELLLGKSKGKQAPKGRPRTAP R S A G K S 1 0 0 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 829.49092 Q7LBC6 Q7LBC6 852 859 KDM3B Lysine-specific demethylase 3B yes yes 2 0.035732 101.33 By MS/MS 2 0 1 1 0 0 0 12231 1772 13030 30810 21707 21707 1 0 0 SAELVGTFVSPEVFLK ACTDEEAAVVQSCTRSAELVGTFVSPEVFL AELVGTFVSPEVFLKLILSTLKKTPSASGL R S A L K L 1 0 0 0 0 0 2 1 0 0 2 1 0 2 1 2 1 0 0 3 0 0 16 0 1721.924 Q86Y56 Q86Y56 423 438 DNAAF5 Dynein assembly factor 5, axonemal yes yes 2 4.2255E-06 174.24 By MS/MS 5 0.816 1 1 1 3 497460 497460 0 12232 1844 13031 30811;30812;30813 21708;21709 21708 2 8348.7 0 SAEQISDSVRR LNPDGLFTDYYGRSRSAEQISDSVRRHMAA GRSRSAEQISDSVRRHMAAFRSVLS_____ R S A R R H 1 2 0 1 0 1 1 0 0 1 0 0 0 0 0 3 0 0 0 1 0 0 11 1 1246.6266 O43819 O43819 246 256 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2;3 0.0052499 142.98 By MS/MS By matching 8 0 3 2 1 17324000 17292000 32419 12233 226 13032 30814;30815;30816 21710;21711 21711 2 1140700 276570 SAFEEEGKETADITHALSK KICRRKESTDEILGRSAFEEEGKETADITH EEGKETADITHALSKLTEPASVPIHKLSVS R S A S K L 3 0 0 1 0 0 4 1 1 1 1 2 0 1 0 2 2 0 0 0 0 0 19 1 2061.9855 Q15042 Q15042 348 366 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 3 0.00076585 104.84 By MS/MS 3 0 1 1 5350700 5350700 0 12234 1469 13033 30817 21712 21712 1 139680 0 SAFSGGYYR HMEPQVKQVFQSLPKSAFSGGYYRGGFEPK FQSLPKSAFSGGYYRGGFEPKMTKREAALI K S A Y R G 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 2 0 0 2 0 0 0 9 0 1006.4508 Q96DA6 Q96DA6 43 51 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 2 0.007566 110.12 By MS/MS 10 0 1 1 670440 670440 0 12235 2149 13034 30818 21713 21713 1 712600 0 SAFSSAETTELSGK AKEEVLQDPVLKQFKSAFSSAETTELSGKC KSAFSSAETTELSGKCVVALATDPNILSLS K S A G K C 2 0 0 0 0 0 2 1 0 0 1 1 0 1 0 4 2 0 0 0 0 0 14 0 1413.6624 Q96LJ7 Q96LJ7 221 234 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 2 6.7261E-26 245.13 By MS/MS 8.5 0.5 1 1 2 1471500 1471500 0 12236 2227 13035 30819;30820 21714 21714 1 172870 0 SAGACTAAAFLK VDCQLADVNNIGKYRSAGACTAAAFLKEFV KYRSAGACTAAAFLKEFVTHPKWAHLDIAG R S A L K E 5 0 0 0 1 0 0 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 12 0 1166.5754 P28838 P28838 458 469 LAP3 Cytosol aminopeptidase yes yes 2 0.0078572 121.5 By MS/MS 6 0 1 1 5506400 5506400 0 12237 722 13036 30821 21715 21715 0 42939 0 SAGGDFGNPLRK ______________________________ ______________________________ M S A R K F 1 1 1 1 0 0 0 3 0 0 1 1 0 1 1 1 0 0 0 0 0 0 12 1 1217.6153 Q9NRW1;Q53S08;Q9H0N0 Q9NRW1 2 13 RAB6B;RAB6C Ras-related protein Rab-6B;Ras-related protein Rab-6C yes no 2 0.0017906 137.46 By MS/MS 9 0 1 1 646290 646290 0 12238 2611 13037 30822 21716 21716 1 370910 0 SAGLEEIEQELTSK HMSPRVVNRMSRFQKSAGLEEIEQELTSKQ KSAGLEEIEQELTSKQGGRCSPVPGLSSSP K S A S K Q 1 0 0 0 0 1 4 1 0 1 2 1 0 0 0 2 1 0 0 0 0 0 14 0 1532.757 Q9H6U6 Q9H6U6 461 474 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 2 4.7564E-06 164.13 By MS/MS 4.5 0.5 1 1 2 504080 504080 0 12239 2513 13038 30823;30824 21717 21717 0 15286 0 SAGNAVWLNR TVPLITSTTGAKLGKSAGNAVWLNRDKTSP AKLGKSAGNAVWLNRDKTSPFELYQFFVRQ K S A N R D 2 1 2 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 10 0 1086.557 Q9Y2Z4 Q9Y2Z4 285 294 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 1.022E-28 260.23 By MS/MS By MS/MS 7 0 2 1 1 15338000 15295000 42126 12240 2909 13039 30825;30826 21718;21719 21719 2 273330 172930 SAGNAVWLNRDK TVPLITSTTGAKLGKSAGNAVWLNRDKTSP LGKSAGNAVWLNRDKTSPFELYQFFVRQPD K S A D K T 2 1 2 1 0 0 0 1 0 0 1 1 0 0 0 1 0 1 0 1 0 0 12 1 1329.6789 Q9Y2Z4 Q9Y2Z4 285 296 YARS2 Tyrosine--tRNA ligase, mitochondrial yes yes 2 0.053779 100.04 By MS/MS 7 0 1 1 1365900 1365900 0 12241 2909 13040 30827 21720 21720 1 24408 0 SAGSALYASR QIYVHLTDGIWSQIKSAGSALYASRLYLSR WSQIKSAGSALYASRLYLSRYQDTHPERLA K S A S R L 3 1 0 0 0 0 0 1 0 0 1 0 0 0 0 3 0 0 1 0 0 0 10 0 981.48796 Q96IJ6 Q96IJ6 250 259 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 2 7.4405E-07 186.16 By MS/MS 6.5 0.5 1 1 2 1631800 1631800 0 12242 2202 13041 30828;30829 21721 21721 1 19860 0 SAHAGTYEVR QDVGRYQVSWSLDHKSAHAGTYEVRFFDEE SLDHKSAHAGTYEVRFFDEESYSLLRKAQR K S A V R F 2 1 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 10 0 1089.5203 P51571 P51571 96 105 SSR4 Translocon-associated protein subunit delta yes yes 2;3 0.00054942 143.03 By MS/MS 9.5 0.5 2 2 4 10060000 10060000 0 12243 968 13042 30830;30831;30832;30833 21722;21723;21724;21725 21725 4 9218800 0 SAHQVAR KCCSGAIIVLTKSGRSAHQVARYRPRAPII IVLTKSGRSAHQVARYRPRAPIIAVTRNPQ R S A A R Y 2 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 7 0 767.40383 P14618 P14618 437 443 PKM Pyruvate kinase PKM yes yes 2 0.029271 115.46 By MS/MS By matching 6.5 2.87 1 2 1 1 1 5 1 5914700 5891500 23199 12244 588 13043 30834;30835;30836;30837;30838;30839 21726;21727 21727 2 140770 71151 SAIDLEEMASGLNK DVNIKLVKQLRENVKSAIDLEEMASGLNKR KSAIDLEEMASGLNKRKMIQHAVFKELVKL K S A N K R 2 0 1 1 0 0 2 1 0 1 2 1 1 0 0 2 0 0 0 0 0 0 14 0 1476.713 P61011 P61011 58 71 SRP54 Signal recognition particle 54 kDa protein yes yes 2 4.8762E-08 185.99 By MS/MS 6 0 1 1 1653100 1653100 0 12245 1082 13044 30840 21728 21728 1 12891 0 SAINEVVTR ______________________________ EKKKGRSAINEVVTREYTINIHKRIHGVGF R S A T R E 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 2 0 0 9 0 987.53491 P62899 P62899 15 23 RPL31 60S ribosomal protein L31 yes yes 2 0.00022264 162.64 By MS/MS By MS/MS 9.67 0.471 1 2 2 1 3499200 3369500 129690 12246 1158 13045 30841;30842;30843 21729;21730;21731 21731 3 3213100 3326300 SAIPAEESDQLLIRPLGAGQEVGR ______________________________ QLLIRPLGAGQEVGRSCIILEFKGRKIMLD M S A G R S 3 2 0 1 0 2 3 3 0 2 3 0 0 0 2 2 0 0 0 1 0 0 24 1 2505.3187 Q9UKF6 Q9UKF6 2 25 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 3 0.0013459 69.548 By MS/MS 4.5 0.5 1 1 2 720010 720010 0 12247 2811 13046 30844;30845 21732 21732 1 27361 0 SAIQNLHSFDPFADASK ______________________________ IQNLHSFDPFADASKGDDLLPAGTEDYIHI M S A S K G 3 0 1 2 0 1 0 0 1 1 1 1 0 2 1 3 0 0 0 0 0 0 17 0 1846.885 P41567 P41567 2 18 EIF1 Eukaryotic translation initiation factor 1 yes yes 2 2.3964E-07 150.9 By MS/MS 10 0 1 1 215730 215730 0 12248 841 13047 30846 21733;21734 21734 2 229300 0 SAIQVPTDLAQK NDIPRILVGNKCDLRSAIQVPTDLAQKFAD DLRSAIQVPTDLAQKFADTHSMPLFETSAK R S A Q K F 2 0 0 1 0 2 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 12 0 1269.6929 Q9H082 Q9H082 154 165 RAB33B Ras-related protein Rab-33B yes yes 2 0.00077029 141.71 By MS/MS 8.5 0.5 1 1 2 2292400 2292400 0 12249 2449 13048 30847;30848 21735;21736 21735 2 681560 0 SAITPGGLR LVSITANKNTCPGDRSAITPGGLRLGAPAL TCPGDRSAITPGGLRLGAPALTSRQFREDD R S A L R L 1 1 0 0 0 0 0 2 0 1 1 0 0 0 1 1 1 0 0 0 0 0 9 0 870.49232 P34897 P34897 417 425 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.011469 101.6 By MS/MS By matching 6.33 0.471 2 1 2 1 9799700 9732300 67381 12250 777 13049 30849;30850;30851 21737 21737 1 76851 206650 SAIYGFGDQSNLR HSGPEGLSIHDGTWKSAIYGFGDQSNLRKL WKSAIYGFGDQSNLRKLRNVSNLKPVPLIG K S A L R K 1 1 1 1 0 1 0 2 0 1 1 0 0 1 0 2 0 0 1 0 0 0 13 0 1426.6841 Q8NBX0 Q8NBX0 199 211 SCCPDH Saccharopine dehydrogenase-like oxidoreductase yes yes 2 0.0018496 139.32 By MS/MS 7 0 1 1 1001300 1001300 0 12251 1948 13050 30852 21738 21738 1 17893 0 SAKPETVIDSLLQ TSKGKARPKTGRRKRSAKPETVIDSLLQ__ KRSAKPETVIDSLLQ_______________ R S A L Q - 1 0 0 1 0 1 1 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 13 1 1399.7559 Q9Y496 Q9Y496 687 699 KIF3A Kinesin-like protein KIF3A yes yes 2 0.018889 116.74 By MS/MS 5 0 1 1 401590 401590 0 12252 2948 13051 30853 21739 21739 1 16507 0 SALALAIK SMLKQDYKEGEMTLKSALALAIKVLNKTMD EGEMTLKSALALAIKVLNKTMDVSKLSAEK K S A I K V 3 0 0 0 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 8 0 785.50109 P25789 P25789 188 195 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.0042045 140.98 By MS/MS By matching 8 0 2 1 1 5157200 5095000 62202 12253 691 13052 30854;30855 21740 21740 1 336120 530660 SALASVIMGLSPILGK PCIKELVSDANQHVKSALASVIMGLSPILG ALASVIMGLSPILGKDNTIEHLLPLFLAQL K S A G K D 2 0 0 0 0 0 0 2 0 2 3 1 1 0 1 3 0 0 0 1 0 0 16 0 1555.9008 P30153 P30153 343 358 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 5.3128E-06 142.97 By MS/MS 6 0 2 2 533390 533390 0 12254 737 13053;13054 30856;30857 21741;21742;21743 21741 499 3 4159.4 0 SALEQMR GGEAPAALEAALEEKSALEQMRKFLSDPQV LEAALEEKSALEQMRKFLSDPQVHTVLVER K S A M R K 1 1 0 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 7 0 833.40654 Q14204 Q14204 60 66 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.017577 137.18 By MS/MS 1 0 1 1 0 0 0 12255 1421 13055 30858 21744 21744 1 0 0 SALLDFYMK FCTSHKEMDVVSQHKSALLDFYMKNILMSK VVSQHKSALLDFYMKNILMSKVKPPKYLLD K S A M K N 1 0 0 1 0 0 0 0 0 0 2 1 1 1 0 1 0 0 1 0 0 0 9 0 1086.542 Q92616 Q92616 221 229 GCN1L1 Translational activator GCN1 yes yes 2 0.0017554 123.72 By MS/MS 2 0.816 1 1 1 3 699350 699350 0 12256 2068 13056 30859;30860;30861 21745 21745 1354 1 29106 0 SALLQEATDCLILLDR CDVARDPNLTPESVKSALLQEATDCLILLD ALLQEATDCLILLDRCSQGRVKGLLAKIPQ K S A D R C 2 1 0 2 1 1 1 0 0 1 5 0 0 0 0 1 1 0 0 0 0 0 16 0 1829.9557 Q6NXR4 Q6NXR4 452 467 TTI2 TELO2-interacting protein 2 yes yes 2 4.3621E-21 226.23 By MS/MS 6 0 1 1 405600 405600 0 12257 1695 13057 30862 21746 21746 1 3162.9 0 SALMPAQLFFK VKIRGIIPETATLFKSALMPAQLFFKTEDG TLFKSALMPAQLFFKTEDGGKYPVIFKHGD K S A F K T 2 0 0 0 0 1 0 0 0 0 2 1 1 2 1 1 0 0 0 0 0 0 11 0 1251.6686 Q8NEB9 Q8NEB9 614 624 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 2 0.013078 90.15 By MS/MS 4.5 0.5 1 1 2 301180 301180 0 12258 1964 13058 30863;30864 21747 21747 1305 1 8733.6 0 SALNDVTAAR YTNRAAAQYYLGNFRSALNDVTAARKLKPC LGNFRSALNDVTAARKLKPCHLKAIIRGAL R S A A R K 3 1 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1016.5251 O95801 O95801 135 144 TTC4 Tetratricopeptide repeat protein 4 yes yes 2 2.0291E-10 198.72 By MS/MS 7 0.816 1 1 1 3 4897400 4897400 0 12259 407 13059 30865;30866;30867 21748 21748 1 92308 0 SALQELEELK KFHRASVLFANEKYKSALQELEELKQIVPK NEKYKSALQELEELKQIVPKESLVYFLIGK K S A L K Q 1 0 0 0 0 1 3 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 10 0 1158.6132 P30260 P30260 721 730 CDC27 Cell division cycle protein 27 homolog yes yes 2 9.3605E-07 183.72 By MS/MS 4 0 1 1 329230 329230 0 12260 739 13060 30868 21749 21749 1 8987.7 0 SALQSINEWAAQTTDGKLPEVTK HYNCEHSKINFRDKRSALQSINEWAAQTTD WAAQTTDGKLPEVTKDVERTDGALLVNAMF R S A T K D 3 0 1 1 0 2 2 1 0 1 2 2 0 0 1 2 3 1 0 1 0 0 23 1 2486.2653 P50454 P50454 168 190 SERPINH1 Serpin H1 yes yes 3 0.0034337 65.416 By MS/MS 6 0 1 1 2235600 2235600 0 12261 947 13061 30869 21750 21750 1 17433 0 SAMPFTASPASSTTAR SEPQEVLHIGSAHNRSAMPFTASPASSTTA AMPFTASPASSTTARVITNQYNNPAGLYSS R S A A R V 4 1 0 0 0 0 0 0 0 0 0 0 1 1 2 4 3 0 0 0 0 0 16 0 1581.7457 O00151 O00151 123 138 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 6.4642E-15 205.02 By MS/MS 8 0 1 1 1629400 1629400 0 12262 71 13062 30870 21751 21751 42 1 107490 0 SANLVAATLGAILNR DCVSVQHVCTIVSFRSANLVAATLGAILNR SANLVAATLGAILNRLRDNKGTPRLRTTVG R S A N R L 4 1 2 0 0 0 0 1 0 1 3 0 0 0 0 1 1 0 0 1 0 0 15 0 1482.8518 P19367 P19367 382 396 HK1 Hexokinase-1 yes yes 2 1.9242E-20 218.94 By MS/MS 6 0 1 1 124750 124750 0 12263 630 13063 30871 21752;21753 21753 2 972.77 0 SANPPHTIQASEEQSSTPAPVKK EDAIASSDVLETASKSANPPHTIQASEEQS QASEEQSSTPAPVKKSGKLRQQIDVKAELE K S A K K S 3 0 1 0 0 2 2 0 1 1 0 2 0 0 4 4 2 0 0 1 0 0 23 1 2403.203 Q9Y450 Q9Y450 215 237 HBS1L HBS1-like protein yes yes 4 0.057731 28.076 By MS/MS 2 0.816 1 1 1 3 850510 850510 0 12264 2945 13064 30872;30873;30874 21754 21754 1 37457 0 SANSELGGIWSVGQR NNARYLWKRIPPAIKSANSELGGIWSVGQR SANSELGGIWSVGQRIWQRDFPGIYTTINA K S A Q R I 1 1 1 0 0 1 1 3 0 1 1 0 0 0 0 3 0 1 0 1 0 0 15 0 1559.7692 Q99627 Q99627 66 80 COPS8 COP9 signalosome complex subunit 8 yes yes 2 0.018971 93.348 By MS/MS 9 0 1 1 1453700 1453700 0 12265 2278 13065 30875 21755 21755 1 834290 0 SANVNEFPVLK NLTEFFVNHILPDLKSANVNEFPVLKADGI PDLKSANVNEFPVLKADGIKYIMIFRNQVP K S A L K A 1 0 2 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 11 0 1216.6452 P55060 P55060 471 481 CSE1L Exportin-2 yes yes 2 0.0011915 131.09 By MS/MS 4.5 0.5 1 1 2 10188000 10188000 0 12266 1025 13066 30876;30877 21756;21757 21756 2 293700 0 SAPAGSSHPAASAR ______________________________ MSAPAGSSHPAASARIPPKFGGAAVSGAAA M S A A R I 5 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 14 0 1265.6113 O95487 O95487 2 15 SEC24B Protein transport protein Sec24B yes yes 2 2.4344E-12 196.67 By MS/MS 2.5 1.12 1 1 1 1 4 934710 934710 0 12267 396 13067 30878;30879;30880;30881 21758 21758 1 27044 0 SAPLAGQK S A Q K 2 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 8 0 770.42865 REV__Q6PIF6 yes yes 2 0.013273 115.46 By MS/MS 5.2 1.17 2 1 1 1 5 15267000 15267000 0 + 12268 3032 13068 30882;30883;30884;30885;30886 21759 21759 1 142390 0 SAQAGAIR LGKHDVTCTVSGGGRSAQAGAIRLAMAKAL TVSGGGRSAQAGAIRLAMAKALCSFVTEDE R S A I R L 3 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 8 0 772.41915 P82933 P82933 338 345 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.038612 95.815 By MS/MS 7 0.816 1 1 1 3 23201000 23201000 0 12269 1211 13069 30887;30888;30889 21760 21760 1 295290 0 SAQPASAEPR QAAKGLAGAVSELLRSAQPASAEPRQNLLQ SELLRSAQPASAEPRQNLLQAAGNVGQASG R S A P R Q 3 1 0 0 0 1 1 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 10 0 1012.4938 Q9Y490 Q9Y490 625 634 TLN1 Talin-1 yes yes 2 0.000917 123.96 By MS/MS 2 0.816 1 1 1 3 1554400 1554400 0 12270 2947 13070 30890;30891;30892 21761 21761 1 73865 0 SAQVAQSLLK LLTRLLQALHIDGPRSAQVAQSLLKEEASW IDGPRSAQVAQSLLKEEASWQQSHHQFRKR R S A L K E 2 0 0 0 0 2 0 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1043.5975 Q9NU22 Q9NU22 3361 3370 MDN1 Midasin yes yes 2 0.0011425 120.06 By MS/MS 1 0 1 1 293120 293120 0 12271 2635 13071 30893 21762 21762 1 14321 0 SASASHQADIK SRSRSPGRPPKSARRSASASHQADIKEARR SARRSASASHQADIKEARREVEVKLTPLIL R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 Q14739 Q14739 97 107 LBR Lamin-B receptor yes yes 2 6.5198E-05 167.09 By MS/MS 1.5 0.5 1 1 2 533620 533620 0 12272 1445 13072 30894;30895 21763;21764 21763 2 26072 0 SASASHQADIKEAR SRSRSPGRPPKSARRSASASHQADIKEARR RSASASHQADIKEARREVEVKLTPLILKPF R S A A R R 4 1 0 1 0 1 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 14 1 1469.7223 Q14739 Q14739 97 110 LBR Lamin-B receptor yes yes 3 0.00051106 121.18 By MS/MS 1.5 0.5 1 1 2 688020 688020 0 12273 1445 13073 30896;30897 21765;21766 21765 2 33615 0 SASASPLTPCSVTR PDRTHPSAAVPVCPRSASASPLTPCSVTRS RSASASPLTPCSVTRSVHRCAPAGERGERR R S A T R S 2 1 0 0 1 0 0 0 0 0 1 0 0 0 2 4 2 0 0 1 0 0 14 0 1432.698 Q3KQU3 Q3KQU3 364 377 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.046377 71.03 By MS/MS 3.5 0.5 1 1 2 839610 839610 0 12274 1567 13074 30898;30899 21767 21767 1 22521 0 SASHAVPASK TELQEVRAQLCNPGRSASHAVPASKK____ CNPGRSASHAVPASKK______________ R S A S K K 3 0 0 0 0 0 0 0 1 0 0 1 0 0 1 3 0 0 0 1 0 0 10 0 953.49304 Q9H6K4 Q9H6K4 169 178 OPA3 Optic atrophy 3 protein yes yes 2 0.00035075 150.81 By MS/MS 9 0.816 1 1 1 3 516610 516610 0 12275 2510 13075 30900;30901;30902 21768 21768 1 300020 0 SASHAVPASKK TELQEVRAQLCNPGRSASHAVPASKK____ NPGRSASHAVPASKK_______________ R S A K K - 3 0 0 0 0 0 0 0 1 0 0 2 0 0 1 3 0 0 0 1 0 0 11 1 1081.588 Q9H6K4 Q9H6K4 169 179 OPA3 Optic atrophy 3 protein yes yes 2 0.0083935 119.62 By MS/MS 9.5 0.5 1 1 2 91406 91406 0 12276 2510 13076 30903;30904 21769 21769 1 54987 0 SASLDVEPIYTFR TLKLWNLQKTVPAKKSASLDVEPIYTFRAH KKSASLDVEPIYTFRAHIGPVLSLAISSNG K S A F R A 1 1 0 1 0 0 1 0 0 1 1 0 0 1 1 2 1 0 1 1 0 0 13 0 1496.7511 Q13033 Q13033 518 530 STRN3 Striatin-3 yes yes 2 0.00112 129.89 By MS/MS 5 0 1 1 296570 296570 0 12277 1326 13077 30905 21770 21770 1 12190 0 SASSLLEQRPK ______________________________ ______________________________ M S A P K G 1 1 0 0 0 1 1 0 0 0 2 1 0 0 1 3 0 0 0 0 0 0 11 1 1214.6619 Q9Y5A9 Q9Y5A9 2 12 YTHDF2 YTH domain-containing family protein 2 yes yes 2 4.3434E-10 197.27 By MS/MS By matching 6.5 2.06 2 1 1 3 1 23830000 23781000 49159 12278 2966 13078 30906;30907;30908;30909 21771;21772 21771 1 760330 145460 SASTEKLEQGTSALIR GSAMANSESKTANKRSASTEKLEQGTSALI ASTEKLEQGTSALIRQMPLSSAGLQNSVAK R S A I R Q 2 1 0 0 0 1 2 1 0 1 2 1 0 0 0 3 2 0 0 0 0 0 16 1 1689.8897 Q8IWC1 Q8IWC1 183 198 MAP7D3 MAP7 domain-containing protein 3 yes yes 3 0.016993 71.286 By MS/MS 3 0 1 1 861200 861200 0 12279 1864 13079 30910 21773 21773 1 22482 0 SASVVETQTLFR VLTYTIPISNPLGPKSASVVETQTLFRRGP GPKSASVVETQTLFRRGPQAGGCVVDSEVL K S A F R R 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 2 2 0 0 2 0 0 12 0 1336.6987 Q96CP6 Q96CP6 437 448 GRAMD1A GRAM domain-containing protein 1A yes yes 2 0.034645 79.148 By MS/MS 1 0 1 1 124760 124760 0 12280 2138 13080 30911 21774 21774 1 6095.6 0 SASVVSVISR ______________________________ ______________________________ M S A S R F 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 3 0 0 10 0 1003.5662 P61803 P61803 2 11 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 2 2.1463E-05 170.47 By MS/MS By matching 5.2 3.97 1 1 1 2 4 1 3347500 3284700 62832 12281 1106 13081 30912;30913;30914;30915;30916 21775;21776 21776 2 3070300 1611600 SATDADVVNSGWLVVGK SEVYTDHGRPGKIHRSATDADVVNSGWLVV TDADVVNSGWLVVGKDDVDNSKPGPSRPGP R S A G K D 2 0 1 2 0 0 0 2 0 0 1 1 0 0 0 2 1 1 0 4 0 0 17 0 1716.8683 Q92538 Q92538 1335 1351 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 8.7452E-19 208.95 By MS/MS 3 0.816 1 1 1 3 444320 444320 0 12282 2055 13082 30917;30918;30919 21777;21778 21777 2 18670 0 SATEQSGTGIR TVGVFAKATAQDNPKSATEQSGTGIRSESE DNPKSATEQSGTGIRSESETESEASEITIP K S A I R S 1 1 0 0 0 1 1 2 0 1 0 0 0 0 0 2 2 0 0 0 0 0 11 0 1105.5364 O95831 O95831 519 529 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 3.777E-22 242.49 By MS/MS By matching 5.38 2.6 1 1 2 1 1 1 1 7 1 29384000 29306000 78786 12283 409 13083 30920;30921;30922;30923;30924;30925;30926;30927 21779;21780;21781;21782;21783;21784 21781 6 1057000 233130 SATKVTADVINAAEK ELIAELQDCEGLIVRSATKVTADVINAAEK SATKVTADVINAAEKLQVVGRAGTGVDNVD R S A E K L 4 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 2 0 0 2 0 0 15 1 1516.8097 O43175 O43175 55 69 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 4.501E-20 228.7 By MS/MS 7.57 1.4 2 2 1 1 1 7 35864000 35864000 0 12284 185 13084 30928;30929;30930;30931;30932;30933;30934 21785;21786;21787 21785 3 596210 0 SATKVTADVINAAEKLQVVGR ELIAELQDCEGLIVRSATKVTADVINAAEK ADVINAAEKLQVVGRAGTGVDNVDLEAATR R S A G R A 4 1 1 1 0 1 1 1 0 1 1 2 0 0 0 1 2 0 0 4 0 0 21 2 2169.2117 O43175 O43175 55 75 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 3.2366E-05 119.62 By MS/MS 6 0 1 1 3386500 3386500 0 12285 185 13085 30935 21788 21788 1 26408 0 SATLASIDAELQK KTKEYELLSDELNQKSATLASIDAELQKLK QKSATLASIDAELQKLKEMTNHQKKRAAEM K S A Q K L 3 0 0 1 0 1 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 0 1345.7089 P33176 P33176 527 539 KIF5B Kinesin-1 heavy chain yes yes 2 4.7411E-18 266.17 By MS/MS 4 0 1 1 2104700 2104700 0 12286 767 13086 30936 21789 21789 1 57456 0 SATLLQLITK YQSLLNSYGEPVDDKSATLLQLITKFATEY PVDDKSATLLQLITKFATEYCNTIEGTAKY K S A T K F 1 0 0 0 0 1 0 0 0 1 3 1 0 0 0 1 2 0 0 0 0 0 10 0 1086.6649 O00429 O00429 330 339 DNM1L Dynamin-1-like protein yes yes 2 5.2698E-07 188.91 By MS/MS 5 0 1 1 169680 169680 0 12287 94 13087 30937 21790 21790 1 6974.7 0 SATSVDQRPK ______________________________ ______________________________ M S A P K G 1 1 0 1 0 1 0 0 0 0 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1087.5622 Q7Z739 Q7Z739 2 11 YTHDF3 YTH domain-containing family protein 3 yes yes 2 0.019451 101.46 By MS/MS 5 0 1 1 1284200 1284200 0 12288 1804 13088 30938 21791 21791 1 52785 0 SAVADKHELLSLASSNHLGK NSHLINVLMWELEKKSAVADKHELLSLASS KHELLSLASSNHLGKNLQLLMDRVDEMSQD K S A G K N 3 0 1 1 0 0 1 1 2 0 4 2 0 0 0 4 0 0 0 1 0 0 20 1 2076.0964 O15372 O15372 222 241 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 4 0.016836 60.09 By MS/MS 7 0 1 1 965530 965530 0 12289 173 13089 30939 21792 21792 1 17254 0 SAVEAERLVAGK EMQKLDAQVKELVLKSAVEAERLVAGKLKK VLKSAVEAERLVAGKLKKDTYIENEKLISG K S A G K L 3 1 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 12 1 1228.6776 P04843 P04843 565 576 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0536 91.469 By MS/MS 5 0 1 1 1867200 1867200 0 12290 458 13090 30940 21793 21793 0 76750 0 SAVENCQDSWR RNPELQNLLLDDFFKSAVENCQDSWRRAVS DFFKSAVENCQDSWRRAVSTGVQAGIPMPC K S A W R R 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 2 0 1 0 1 0 0 11 0 1350.5623 P52209 P52209 397 407 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 4.0031E-22 247.08 By MS/MS 6.5 0.5 1 1 2 4218400 4218400 0 12291 981 13091 30941;30942 21794;21795 21795 2 45561 0 SAVGFEYQGK GFGGKFGVQMDRVDQSAVGFEYQGKTEKHA DRVDQSAVGFEYQGKTEKHASQKDYSSGFG Q S A G K T 1 0 0 0 0 1 1 2 0 0 0 1 0 1 0 1 0 0 1 1 0 0 10 0 1084.5189 Q14247 Q14247 135 144 CTTN Src substrate cortactin yes yes 2 0.029416 85.807 By MS/MS 5 0 1 1 625590 625590 0 12292 1424 13092 30943 21796 21796 1 25714 0 SAVGHEYQSK GYGGKFGVEQDRMDKSAVGHEYQSKLSKHC DRMDKSAVGHEYQSKLSKHCSQVDSVRGFG K S A S K L 1 0 0 0 0 1 1 1 1 0 0 1 0 0 0 2 0 0 1 1 0 0 10 0 1104.52 Q14247 Q14247 98 107 CTTN Src substrate cortactin yes yes 2 0.004285 109.79 By MS/MS 4 0.816 1 1 1 3 614010 614010 0 12293 1424 13093 30944;30945;30946 21797 21797 1 21934 0 SAVLCYSPSDR ADVDPHQFPAVHRWKSAVLCYSPSDRQSWP HRWKSAVLCYSPSDRQSWPSPAVKGRFKSQ K S A D R Q 1 1 0 1 1 0 0 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 11 0 1253.571 Q86XL3 Q86XL3 860 870 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0045003 109.83 By MS/MS 4 0 1 1 1040100 1040100 0 12294 1841 13094 30947 21798 21798 1 28393 0 SAVLQEAR EESGGGSNPFQHLEKSAVLQEARVFNETPI PFQHLEKSAVLQEARVFNETPINPRKCAHI K S A A R V 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 872.47158 Q9Y678;Q9UBF2 Q9Y678 25 32 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 0.0040659 154.12 By MS/MS 4.67 0.471 1 2 3 7250700 7250700 0 12295 2996;2748 13095 30948;30949;30950 21799;21800;21801 21801 3 197940 0 SAVLSEPVLFLK VCVGRNYADHVREMRSAVLSEPVLFLKPST EMRSAVLSEPVLFLKPSTAYAPEGSPILMP R S A L K P 1 0 0 0 0 0 1 0 0 0 3 1 0 1 1 2 0 0 0 2 0 0 12 0 1301.7595 Q6P587 Q6P587 36 47 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 2 0.0016677 125.71 By MS/MS 8.5 0.5 1 1 2 156250 156250 0 12296 1710 13096 30951;30952 21802 21802 1 53991 0 SAVPFLPVNPEYSATR VWLATQNHSTLVTERSAVPFLPVNPEYSAT AVPFLPVNPEYSATRNQGRQKLARFNAREF R S A T R N 2 1 1 0 0 0 1 0 0 0 1 0 0 1 3 2 1 0 1 2 0 0 16 0 1746.8941 Q9Y2X7 Q9Y2X7 310 325 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 0.031046 74.475 By MS/MS 4.5 0.5 1 1 2 1306100 1306100 0 12297 2905 13097 30953;30954 21803 21803 1 39789 0 SAVPPGADKK ARLTRGEADRDTYRRSAVPPGADKKAEAGA DTYRRSAVPPGADKKAEAGAGSATEFQFRG R S A K K A 2 0 0 1 0 0 0 1 0 0 0 2 0 0 2 1 0 0 0 1 0 0 10 1 968.5291 P46783 P46783 130 139 RPS10 40S ribosomal protein S10 yes yes 3 0.0044422 112.71 By MS/MS By matching 9 0 2 1 1 279540 271570 7972.9 12298 889 13098 30955;30956 21804 21804 1 155850 85925 SAVPPGADKKAEAGAGSATEFQFR ARLTRGEADRDTYRRSAVPPGADKKAEAGA KAEAGAGSATEFQFRGGFGRGRGQPPQ___ R S A F R G 6 1 0 1 0 1 2 3 0 0 0 2 0 2 2 2 1 0 0 1 0 0 24 2 2391.1819 P46783 P46783 130 153 RPS10 40S ribosomal protein S10 yes yes 4 0.0021535 53.779 By MS/MS 9 0 1 1 2199700 2199700 0 12299 889 13099 30957 21805 21805 1 1262400 0 SAVWLPDSVLEASR NGGFYLSCMGFPECRSAVWLPDSVLEASRD RSAVWLPDSVLEASRDSSVCPVCQPHPVYR R S A S R D 2 1 0 1 0 0 1 0 0 0 2 0 0 0 1 3 0 1 0 2 0 0 14 0 1528.7886 Q13472 Q13472 687 700 TOP3A DNA topoisomerase 3-alpha yes yes 2 0.0042131 107.34 By MS/MS 4 0 1 1 310940 310940 0 12300 1374 13100 30958 21806 21806 1 8488.4 0 SAWAAASLSR ______________________________ ______________________________ M S A S R A 4 1 0 0 0 0 0 0 0 0 1 0 0 0 0 3 0 1 0 0 0 0 10 0 1018.5196 Q9BSH4 Q9BSH4 2 11 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 3 0.051797 42.348 By MS/MS 6.5 0.5 1 1 2 4412000 4412000 0 12301 2337 13101 30959;30960 21807 21807 0 39034 0 SAYCLGSSHPR SATDIQRVAVLCVSRSAYCLGSSHPRGFLA CVSRSAYCLGSSHPRGFLAMKMRHLNAMGF R S A P R G 1 1 0 0 1 0 0 1 1 0 1 0 0 0 1 3 0 0 1 0 0 0 11 0 1233.5561 Q9NYY8 Q9NYY8 642 652 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.051646 76.282 By MS/MS 6 0 1 1 1132400 1132400 0 12302 2701 13102 30961 21808 21808 1 8830.6 0 SAYDSTMETMNYAQIR KHPEVDVLINFASLRSAYDSTMETMNYAQI AYDSTMETMNYAQIRTIAIIAEGIPEALTR R S A I R T 2 1 1 1 0 1 1 0 0 1 0 0 2 0 0 2 2 0 2 0 0 0 16 0 1879.808 P53396 P53396 577 592 ACLY ATP-citrate synthase yes yes 2 2.008E-92 336.16 By MS/MS 3.14 1.12 1 1 1 4 7 6525800 6525800 0 12303 1001 13103;13104;13105 30962;30963;30964;30965;30966;30967;30968 21809;21810;21811;21812 21812 762;763 4 184600 0 SAYEEQR YFERAKRLEEIPLIKSAYEEQRIKDMDLWE LEEIPLIKSAYEEQRIKDMDLWEQQEEERI K S A Q R I 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 7 0 881.38791 Q14152 Q14152 712 718 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.007332 166.05 By MS/MS By MS/MS 2.25 0.829 1 1 2 3 1 681280 588330 92950 12304 1409 13106 30969;30970;30971;30972 21813;21814;21815 21814 3 29154 133220 SAYESQPIR PELQVAFADCAADIKSAYESQPIRQTAQDW CAADIKSAYESQPIRQTAQDWPATSLNCIA K S A I R Q 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 0 1049.5142 Q96EY7 Q96EY7 557 565 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.00021473 163.15 By MS/MS By matching 5 0 2 1 1 6247700 6200400 47342 12305 2170 13107 30973;30974 21816 21816 1 254860 140090 SAYNVYVAER KKKELTLLGKPKRPRSAYNVYVAERFQEAK PKRPRSAYNVYVAERFQEAKGDSPQEKLKT R S A E R F 2 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 2 2 0 0 10 0 1170.5669 Q00059 Q00059 160 169 TFAM Transcription factor A, mitochondrial yes yes 2 1.6526E-15 214.71 By MS/MS 9.5 0.5 1 1 2 8567700 8567700 0 12306 1229 13108 30975;30976 21817 21817 1 4955700 0 SCAAAGTECLISGWGNTK PATLNSRVATVSLPRSCAAAGTECLISGWG AAGTECLISGWGNTKSSGSSYPSLLQCLKA R S C T K S 3 0 1 0 2 0 1 3 0 1 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1881.8349 CON__P00761 CON__P00761 116 133 yes yes 2;3 3.132E-285 489.52 By MS/MS By MS/MS 5 2.85 6 4 6 4 6 3 3 4 4 3 20 23 345470000 162210000 183260000 + 12307 33 13109 30977;30978;30979;30980;30981;30982;30983;30984;30985;30986;30987;30988;30989;30990;30991;30992;30993;30994;30995;30996;30997;30998;30999;31000;31001;31002;31003;31004;31005;31006;31007;31008;31009;31010;31011;31012;31013;31014;31015;31016;31017;31018;31019 21818;21819;21820;21821;21822;21823;21824;21825;21826;21827;21828;21829;21830;21831;21832;21833;21834;21835;21836;21837;21838;21839;21840;21841;21842;21843;21844;21845;21846;21847;21848;21849;21850;21851;21852;21853;21854;21855;21856;21857;21858;21859;21860;21861;21862;21863 21842 45 34580000 627240000 SCAEWVSLSK KYTAQVDAEEKEDVKSCAEWVSLSKARIVE KEDVKSCAEWVSLSKARIVEYEKEMEKMKN K S C S K A 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 3 0 1 0 1 0 0 10 0 1165.5438 O75947 O75947 100 109 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 0.00031328 152.28 By MS/MS 9 0 1 1 3122700 3122700 0 12308 340 13110 31020 21864 21864 1 1792200 0 SCAGISGK LAAIVILLLKIWKTRSCAGISGKSQLLFAL LKIWKTRSCAGISGKSQLLFALVFTTRYLD R S C G K S 1 0 0 0 1 0 0 2 0 1 0 1 0 0 0 2 0 0 0 0 0 0 8 0 778.36434 P33947;P24390 P33947 28 35 KDELR2;KDELR1 ER lumen protein-retaining receptor 2;ER lumen protein-retaining receptor 1 yes no 2 0.010733 118.74 By MS/MS 2 0.816 1 1 1 3 2676400 2676400 0 12309 676 13111 31021;31022;31023 21865;21866 21866 2 128410 0 SCAHDWVYE EISLWFKPEELVDYKSCAHDWVYE______ ELVDYKSCAHDWVYE_______________ K S C Y E - 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 1 1 1 0 0 9 0 1165.4499 P22392;O60361 P22392 144 152 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2 0.037306 86.953 By MS/MS 10 0 1 1 819990 819990 0 12310 659 13112 31024 21867 21867 1 871560 0 SCDLLLFLR AFCALFDCDRPVAQKSCDLLLFLRDKIASY RPVAQKSCDLLLFLRDKIASYSSLREARGS K S C L R D 0 1 0 1 1 0 0 0 0 0 4 0 0 1 0 1 0 0 0 0 0 0 9 0 1135.606 Q6PJG6 Q6PJG6 719 727 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.0023477 141.39 By MS/MS 5 0 1 1 111690 111690 0 12311 1717 13113 31025 21868 21868 1 4591.1 0 SCDPGLEDPCGLNR SDVDAFIAYVGTDQKSCDPGLEDPCGLNRA KSCDPGLEDPCGLNRARMSFCVYSILGVVK K S C N R A 0 1 1 2 2 0 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 14 0 1588.661 Q9HAV4 Q9HAV4 705 718 XPO5 Exportin-5 yes yes 2 4.4978E-08 186.74 By MS/MS 4 0.816 1 1 1 3 2891900 2891900 0 12312 2546 13114 31026;31027;31028 21869 21869 1 80100 0 SCDVEPNDTVDALYNR WADDGLDTGPILLQRSCDVEPNDTVDALYN CDVEPNDTVDALYNRFLFPEGIKAMVEAVQ R S C N R F 1 1 2 3 1 0 1 0 0 0 1 0 0 0 1 1 1 0 1 2 0 0 16 0 1866.8054 Q3SY69 Q3SY69 173 188 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 5.2869E-22 232.37 By MS/MS 4 0 1 1 1374100 1374100 0 12313 1570 13115 31029 21870 21870 1 37512 0 SCENLAPFNTALK GCSVTVPANVQRWMRSCENLAPFNTALKLL MRSCENLAPFNTALKLLK____________ R S C L K L 2 0 2 0 1 0 1 0 0 0 2 1 0 1 1 1 1 0 0 0 0 0 13 0 1463.7079 Q13155 Q13155 305 317 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 9.1608E-12 203.61 By MS/MS 8.5 1.12 1 1 1 1 4 11104000 11104000 0 12314 1342 13116 31030;31031;31032;31033 21871;21872;21873 21872 3 881370 0 SCEVLFNPFDDIIPR DIDDDERPHNPHKIKSCEVLFNPFDDIIPR SCEVLFNPFDDIIPREIKRLKKEKPEEEVK K S C P R E 0 1 1 2 1 0 1 0 0 2 1 0 0 2 2 1 0 0 0 1 0 0 15 0 1820.8767 Q6UX04 Q6UX04 163 177 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 2 7.6181E-21 227.56 By MS/MS 6 0 1 1 502380 502380 0 12315 1731 13117 31034 21874 21874 1 3917.6 0 SCFGHPLAPQALEDVK LDQALSDEELNAFQKSCFGHPLAPQALEDV CFGHPLAPQALEDVKTVVCRNVAGGVREDR K S C V K T 2 0 0 1 1 1 1 1 1 0 2 1 0 1 2 1 0 0 0 1 0 0 16 0 1767.8614 Q8IXI1 Q8IXI1 215 230 RHOT2 Mitochondrial Rho GTPase 2 yes yes 3 0.0059143 91.355 By MS/MS 5 0 1 1 948950 948950 0 12316 1871 13118 31035 21875 21875 1 39006 0 SCGLFTAPFPQDSDELER DLGGGLKPPGYYVQRSCGLFTAPFPQDSDE LFTAPFPQDSDELERITKLFHFLGIFLAKC R S C E R I 1 1 0 2 1 1 2 1 0 0 2 0 0 2 2 2 1 0 0 0 0 0 18 0 2067.9208 Q9ULT8 Q9ULT8 2223 2240 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 5.932E-09 157.86 By MS/MS 3 0.816 1 1 1 3 714350 714350 0 12317 2826 13119 31036;31037;31038 21876;21877;21878 21878 3 25293 0 SCGNEFVETLKK ______________________________ ______________________________ M S C K K I 0 0 1 0 1 0 2 1 0 0 1 2 0 1 0 1 1 0 0 1 0 0 12 1 1410.6813 Q68CZ6 Q68CZ6 2 13 HAUS3 HAUS augmin-like complex subunit 3 yes yes 2 0.050481 88.155 By MS/MS 5 0 1 1 1045600 1045600 0 12318 1672 13120 31039 21879 21879 1 42978 0 SCGSLLPELK RSGGLGGSHALLLLRSCGSLLPELKLEERT LLLLRSCGSLLPELKLEERTEFAHRIWDTL R S C L K L 0 0 0 0 1 0 1 1 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1102.5692 P42704 P42704 129 138 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.00031879 152.06 By MS/MS 2.83 1.21 1 1 3 1 6 17788000 17788000 0 12319 854 13121 31040;31041;31042;31043;31044;31045 21880;21881;21882;21883;21884 21881 5 477140 0 SCGSLLPELKLEER RSGGLGGSHALLLLRSCGSLLPELKLEERT RSCGSLLPELKLEERTEFAHRIWDTLQKLG R S C E R T 0 1 0 0 1 0 3 1 0 0 4 1 0 0 1 2 0 0 0 0 0 0 14 1 1629.8396 P42704 P42704 129 142 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 0.0011804 143.55 By MS/MS 3 0 2 2 16314000 16314000 0 12320 854 13122 31046;31047 21885;21886;21887 21886 3 425890 0 SCHTAVELFK YNLAQMHASGTGVMRSCHTAVELFKNVCER TGVMRSCHTAVELFKNVCERGRWSERLMTA R S C F K N 1 0 0 0 1 0 1 0 1 0 1 1 0 1 0 1 1 0 0 1 0 0 10 0 1190.5754 Q9UBV2 Q9UBV2 538 547 SEL1L Protein sel-1 homolog 1 yes yes 3 0.00032388 133.23 By MS/MS 4 0 1 1 658640 658640 0 12321 2758 13123 31048 21888 21888 1 17980 0 SCINLPTVLPGSPSK ______________________________ SCINLPTVLPGSPSKTRGQIQVILGPMFSG M S C S K T 0 0 1 0 1 0 0 1 0 1 2 1 0 0 3 3 1 0 0 1 0 0 15 0 1568.8232 P04183 P04183 2 16 TK1 Thymidine kinase, cytosolic yes yes 2 0.0056116 84.718 By MS/MS 9 0 1 1 103920 103920 0 12322 448 13124 31049 21889 21889 1 59642 0 SCISCLNSNAMPR ALKLGGSARGHNGVRSCISCLNSNAMPRLR VRSCISCLNSNAMPRLRVGIGRPAHPEAVQ R S C P R L 1 1 2 0 2 0 0 0 0 1 1 0 1 0 1 3 0 0 0 0 0 0 13 0 1508.6534 Q86Y79 Q86Y79 146 158 PTRH1 Probable peptidyl-tRNA hydrolase yes yes 2 0.0011775 117.95 By MS/MS 9 0 1 1 122550 122550 0 12323 1845 13125 31050 21890 21890 1277 0 70332 0 SCLEFSLR LAWCHDNKSRLRKMKSCLEFSLRIQEFIEL SRLRKMKSCLEFSLRIQEFIELIRQNKRLD K S C L R I 0 1 0 0 1 0 1 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 8 0 1010.4855 Q7L5Y9 Q7L5Y9 194 201 MAEA Macrophage erythroblast attacher yes yes 2 0.0082484 124.98 By MS/MS 7.5 0.5 1 1 2 621380 621380 0 12324 1769 13126 31051;31052 21891 21891 1 20815 0 SCNCLLLK TVTNPKRIAKAVNEKSCNCLLLKVNQIGSV AKAVNEKSCNCLLLKVNQIGSVTESLQACK K S C L K V 0 0 1 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 1006.494 P06733 P06733 336 343 ENO1 Alpha-enolase yes yes 2 0.0015047 164.72 By MS/MS By matching 6.33 0.471 2 1 2 1 6655200 6632500 22644 12325 482 13127 31053;31054;31055 21892 21892 1 53578 69447 SCQAQPTTMAR QILQWQVLSNTVPAKSCQAQPTTMARHPHP VPAKSCQAQPTTMARHPHPHLSFMAIPPKK K S C A R H 2 1 0 0 1 2 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 11 0 1249.5543 CON__P02668 CON__P02668 87 97 yes yes 2 8.2184E-11 201.09 By MS/MS By matching 7.25 1.71 2 1 1 2 1 1 7 1 19956000 19942000 13292 + 12326 40 13128;13129 31056;31057;31058;31059;31060;31061;31062;31063 21893;21894;21895;21896;21897;21898 21893 24 6 839240 113390 SCQEILAHQK QSAKPRLDCLIEVYRSCQEILAHQKATSTS IEVYRSCQEILAHQKATSTSP_________ R S C Q K A 1 0 0 0 1 2 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1212.5921 Q14442 Q14442 173 182 PIGH Phosphatidylinositol N-acetylglucosaminyltransferase subunit H yes yes 3 0.022991 67.93 By MS/MS 9.5 0.5 1 1 2 312020 312020 0 12327 1431 13130 31064;31065 21899 21899 1 191600 0 SCQFVAVR KGVPIRLEVGPRDMKSCQFVAVRRDTGEKL VGPRDMKSCQFVAVRRDTGEKLTVAENEAE K S C V R R 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 8 0 965.47529 P07814 P07814 1376 1383 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0066277 131.03 By MS/MS 2.5 1.12 1 1 1 1 4 13261000 13261000 0 12328 493 13131 31066;31067;31068;31069 21900;21901;21902 21901 3 357790 0 SCQISCK ______________________________ ______________________________ M S C C K S 0 0 0 0 2 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 7 0 881.37352 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 2 8 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0051152 143.89 By MS/MS By MS/MS 5.31 2.89 2 1 2 2 2 1 2 1 1 2 8 8 12204000 7069800 5134500 + 12329 52 13132 31070;31071;31072;31073;31074;31075;31076;31077;31078;31079;31080;31081;31082;31083;31084;31085 21903;21904;21905;21906;21907;21908;21909;21910;21911;21912;21913;21914;21915;21916;21917 21911 15 936140 31381000 SCQISCKSR ______________________________ ______________________________ M S C S R G 0 1 0 0 2 1 0 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 9 1 1124.5067 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 2 10 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.00024009 171.56 By MS/MS By MS/MS 5.36 3.05 2 1 1 1 1 2 1 1 1 7 4 3702300 2689500 1012800 + 12330 52 13133 31086;31087;31088;31089;31090;31091;31092;31093;31094;31095;31096 21918;21919;21920;21921;21922 21919 5 831350 1708300 SCQQSQQQCQPPPK ______________________________ MSCQQSQQQCQPPPKCTPKCPPKCPTPKCP M S C P K C 0 0 0 0 2 6 0 0 0 0 0 1 0 0 3 2 0 0 0 0 0 0 14 0 1699.7406 Q5T7P2;Q5T752;Q5TCM9;Q5T754;Q5T753;Q5T751 Q5T7P2 2 15 LCE1A;LCE1D;LCE5A;LCE1F;LCE1E;LCE1C Late cornified envelope protein 1A;Late cornified envelope protein 1D;Late cornified envelope protein 5A;Late cornified envelope protein 1F;Late cornified envelope protein 1E;Late cornified envelope protein 1C yes no 2 0.0027574 98.754 By MS/MS 8 0 1 1 42615 0 42615 12331 1632 13134 31097 21923;21924 21924 2 0 363560 SCRQFSSSYLSR ______________________________ ______________________________ M S C S R S 0 2 0 0 1 1 0 0 0 0 1 0 0 1 0 5 0 0 1 0 0 0 12 1 1476.678 P35527;CON__P35527 P35527 2 13 KRT9 Keratin, type I cytoskeletal 9 yes no 2 5.0024E-05 173.04 By matching By MS/MS 2.8 1.17 1 1 1 2 1 4 2810800 682030 2128800 + 12332 791 13135 31098;31099;31100;31101;31102 21925;21926;21927;21928 21928 4 18619 3327000 SCSGVEFSTSGSSNTDTGK KGFGFGLVKLDVKTKSCSGVEFSTSGSSNT VEFSTSGSSNTDTGKVTGTLETKYKWCEYG K S C G K V 0 0 1 1 1 0 1 3 0 0 0 1 0 1 0 6 3 0 0 1 0 0 19 0 1906.7851 P45880 P45880 46 64 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 3.2413E-34 241.41 By MS/MS 8.5 0.5 1 1 2 1363400 1363400 0 12333 870 13136 31103;31104 21929 21929 1 108800 0 SCSLVLEHQPDNIK AASQLKLDHYRAALRSCSLVLEHQPDNIKA RSCSLVLEHQPDNIKALFRKGKVLAQQGEY R S C I K A 0 0 1 1 1 1 1 0 1 1 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1638.8036 Q14318 Q14318 294 307 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 3 0.0028085 97.463 By MS/MS 6.5 0.5 1 1 2 25478000 25478000 0 12334 1428 13137 31105;31106 21930 21930 1 201660 0 SCSTEQPLTSTK AIPSSGYPPSTTKIKSCSTEQPLTSTKTPK KIKSCSTEQPLTSTKTPKPQSIIPPVQTLS K S C T K T 0 0 0 0 1 1 1 0 0 0 1 1 0 0 1 3 3 0 0 0 0 0 12 0 1337.6133 Q2KHR3 Q2KHR3 282 293 QSER1 Glutamine and serine-rich protein 1 yes yes 2 0.0058963 101.71 By MS/MS 2 0 1 1 153600 153600 0 12335 1557 13138 31107 21931 21931 1 7634.6 0 SCTEGKGEYTMEYSR DVPLNDMFGYSTELRSCTEGKGEYTMEYSR SCTEGKGEYTMEYSRYQPCLPSTQEDVINK R S C S R Y 0 1 0 0 1 0 3 2 0 0 0 1 1 0 0 2 2 0 2 0 0 0 15 1 1796.7345 Q96RP9 Q96RP9 705 719 GFM1 Elongation factor G, mitochondrial yes yes 3 0.025476 63.894 By MS/MS 5 0 1 1 820540 820540 0 12336 2247 13139 31108 21932 21932 1 33728 0 SCTTESCDFVR SMTRLFREGRTETVRSCTTESCDFVRAMVD ETVRSCTTESCDFVRAMVDPAQTVEQRLKL R S C V R A 0 1 0 1 2 0 1 0 0 0 0 0 0 1 0 2 2 0 0 1 0 0 11 0 1360.5387 P50416 P50416 607 617 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 2 0.00086708 135.43 By MS/MS 2.67 1.7 1 1 1 3 947270 947270 0 12337 946 13140 31109;31110;31111 21933;21934;21935 21935 3 42058 0 SDAPDTLLLEK ______________________________ VIIKSDAPDTLLLEKHADYIASYGSKKDDY K S D E K H 1 0 0 2 0 0 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 11 0 1200.6238 P53611 P53611 12 22 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 2 0.0011851 128.81 By MS/MS 8 0 1 1 918650 918650 0 12338 1003 13141 31112 21936 21936 1 60603 0 SDATADDLIDVVEGNR ILAEYKIHNADVTLRSDATADDLIDVVEGN DATADDLIDVVEGNRVYIPCIYVLNKIDQI R S D N R V 2 1 1 4 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 16 0 1688.7853 Q9Y295 Q9Y295 223 238 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 2;3 6.3699E-50 271.01 By MS/MS 7 0 2 2 1648800 1648800 0 12339 2880 13142 31113;31114 21937;21938 21937 2 29464 0 SDAYYCTGDVTAWTK ALLPCEECSGQLVFKSDAYYCTGDVTAWTK SDAYYCTGDVTAWTKCMVKTQTPNRKEWVT K S D T K C 2 0 0 2 1 0 0 1 0 0 0 1 0 0 0 1 3 1 2 1 0 0 15 0 1736.7352 P09874 P09874 306 320 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 4.948E-10 187.78 By MS/MS 4 0.816 1 1 1 3 6415300 6415300 0 12340 521 13143 31115;31116;31117 21939 21939 1 179960 0 SDCKEFSSEAR ASGVRTGTKIIIHLKSDCKEFSSEARVRDV IHLKSDCKEFSSEARVRDVVTKYSNFVSFP K S D A R V 1 1 0 1 1 0 2 0 0 0 0 1 0 1 0 3 0 0 0 0 0 0 11 1 1314.551 Q12931 Q12931 259 269 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 0.00048031 167.12 By MS/MS 5 0 2 2 4355100 4355100 0 12341 1316 13144 31118;31119 21940;21941 21941 2 179010 0 SDEAVKPFGLK LSLMRLDRFRDSILRSDEAVKPFGLKVSQL SILRSDEAVKPFGLKVSQLLLSTDESTFDD R S D L K V 1 0 0 1 0 0 1 1 0 0 1 2 0 1 1 1 0 0 0 1 0 0 11 1 1189.6343 P49327 P49327 523 533 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 0.00053131 166.07 By MS/MS 2.78 1.31 2 2 2 2 1 9 35345000 35345000 0 12342 915 13145 31120;31121;31122;31123;31124;31125;31126;31127;31128 21942;21943;21944;21945;21946;21947 21944 6 1241500 0 SDEHVRTELAR PNVPIILVANKKDLRSDEHVRTELARMKQE KDLRSDEHVRTELARMKQEPVRTDDGRAMA R S D A R M 1 2 0 1 0 0 2 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 11 1 1311.6531 P62745 P62745 123 133 RHOB Rho-related GTP-binding protein RhoB yes yes 3 0.01022 87.184 By MS/MS 9 0 1 1 309020 309020 0 12343 1141 13146 31129 21948 21948 1 177350 0 SDEISFADFK PLEKGIFTSGTWEEKSDEISFADFKFSVTH TWEEKSDEISFADFKFSVTHHYLVQESTDK K S D F K F 1 0 0 2 0 0 1 0 0 1 0 1 0 2 0 2 0 0 0 0 0 0 10 0 1157.5241 Q15042 Q15042 62 71 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 9.2069E-11 207.29 By MS/MS 3.5 0.5 1 1 2 955390 955390 0 12344 1469 13147 31130;31131 21949 21949 1 25036 0 SDEVFSTTLAYTK ______________________________ ______________________________ M S D T K S 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 2 3 0 1 1 0 0 13 0 1460.7035 Q49MG5 Q49MG5 2 14 MAP9 Microtubule-associated protein 9 yes yes 2 3.848E-12 202.31 By MS/MS 4 0 1 1 325490 325490 0 12345 1574 13148 31132 21950 21950 1 8885.4 0 SDFFLEGPFMPPR DLGVFIPAPMAQGMRSDFFLEGPFMPPRMK MRSDFFLEGPFMPPRMKMDRDPLGGLADMF R S D P R M 0 1 0 1 0 0 1 1 0 0 1 0 1 3 3 1 0 0 0 0 0 0 13 0 1538.7228 P78344 P78344 348 360 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00058106 133.23 By MS/MS 5 1.1 2 2 1 5 1756100 1756100 0 12346 1192 13149;13150 31133;31134;31135;31136;31137 21951;21952;21953;21954;21955 21951 937 5 49516 0 SDFQVNLNNASR YKELRKPLEKEGWKKSDFQVNLNNASRSQS WKKSDFQVNLNNASRSQSSHSYDDSTLPLI K S D S R S 1 1 3 1 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 12 0 1363.648 O60716 O60716 847 858 CTNND1 Catenin delta-1 yes yes 2 5.5108E-11 203.03 By MS/MS 6 1.41 1 1 1 1 1 5 7796700 7796700 0 12347 260 13151 31138;31139;31140;31141;31142 21956 21956 1 217330 0 SDGALLLGASSLSGR APACMERQLEAARYRSDGALLLGASSLSGR SDGALLLGASSLSGRCWAGSLWLFKDPCAA R S D G R C 2 1 0 1 0 0 0 3 0 0 4 0 0 0 0 4 0 0 0 0 0 0 15 0 1402.7416 Q9BQA1 Q9BQA1 38 52 WDR77 Methylosome protein 50 yes yes 2 5.9099E-21 228.83 By MS/MS By MS/MS 7.5 0.5 2 2 2 2 9541300 9306600 234680 12348 2309 13152 31143;31144;31145;31146 21957;21958;21959;21960 21960 4 342830 1729500 SDGGYTYDTSDLAAIK IVFVPGCSIPLTIVKSDGGYTYDTSDLAAI DGGYTYDTSDLAAIKQRLFEEKADMIIYVV K S D I K Q 2 0 0 3 0 0 0 2 0 1 1 1 0 0 0 2 2 0 2 0 0 0 16 0 1675.7577 P54136 P54136 378 393 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 1.0947E-63 303.31 By MS/MS 5 0 1 1 5731400 5731400 0 12349 1013 13153 31147 21961 21961 1 235580 0 SDGIYIINLK TNLDFQMEQYIYKRKSDGIYIINLKRTWEK IYKRKSDGIYIINLKRTWEKLLLAARAIVA K S D L K R 0 0 1 1 0 0 0 1 0 3 1 1 0 0 0 1 0 0 1 0 0 0 10 0 1134.6285 P08865 P08865 43 52 RPSA 40S ribosomal protein SA yes yes 2 9.2236E-05 166.52 By MS/MS 7 0 1 1 4072700 4072700 0 12350 509 13154 31148 21962 21962 1 72779 0 SDGIYIINLKR TNLDFQMEQYIYKRKSDGIYIINLKRTWEK YKRKSDGIYIINLKRTWEKLLLAARAIVAI K S D K R T 0 1 1 1 0 0 0 1 0 3 1 1 0 0 0 1 0 0 1 0 0 0 11 1 1290.7296 P08865 P08865 43 53 RPSA 40S ribosomal protein SA yes yes 2;3 0.00071307 155.58 By MS/MS 7 0 2 2 2276700 2276700 0 12351 509 13155 31149;31150 21963;21964 21963 2 40684 0 SDGSLEDGDDVHR LTSDESTLIEDGGARSDGSLEDGDDVHRAV ARSDGSLEDGDDVHRAVDNERDGVTYSYSF R S D H R A 0 1 0 4 0 0 1 2 1 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1400.5804 Q9NRX5 Q9NRX5 361 373 SERINC1 Serine incorporator 1 yes yes 2 0.018346 99.53 By MS/MS 1.5 0.5 1 1 2 168490 168490 0 12352 2616 13156 31151;31152 21965 21965 1 8284.7 0 SDHLIQTDTVNLHR AFEEAVRRVLATEDRSDHLIQTDTVNLHRK RSDHLIQTDTVNLHRKPKPSSSCC______ R S D H R K 0 1 1 2 0 1 0 0 2 1 2 0 0 0 0 1 2 0 0 1 0 0 14 0 1647.8329 P51151 P51151 179 192 RAB9A Ras-related protein Rab-9A yes yes 3 1.0408E-05 162.67 By MS/MS 9 0 1 1 1477700 1477700 0 12353 961 13157 31153 21966 21966 1 848080 0 SDIDEIVLVGGSTR MKPVQKVLEDSDLKKSDIDEIVLVGGSTRI KSDIDEIVLVGGSTRIPKIQQLVKEFFNGK K S D T R I 0 1 0 2 0 0 1 2 0 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1459.7518 P11021 P11021 354 367 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 8.0276E-18 238.92 By MS/MS By matching 5 0 3 2 1 13428000 13389000 38170 12354 545 13158 31154;31155;31156 21967;21968 21967 2 550360 112950 SDIDVNAAAGAK SSKASSLPGSLQRSRSDIDVNAAAGAKAHH RSRSDIDVNAAAGAKAHHAAGQSVRSGRLG R S D A K A 4 0 1 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 12 0 1130.5568 O75122 O75122 370 381 CLASP2 CLIP-associating protein 2 yes yes 2 1.7012E-05 161.51 By MS/MS 3 0 1 1 0 0 0 12355 279 13159 31157 21969 21969 1 0 0 SDIGEVILVGGMTR IAPCQKAMQDAEVSKSDIGEVILVGGMTRM KSDIGEVILVGGMTRMPKVQQTVQDLFGRA K S D T R M 0 1 0 1 0 0 1 3 0 2 1 0 1 0 0 1 1 0 0 2 0 0 14 0 1445.7548 P38646 P38646 378 391 HSPA9 Stress-70 protein, mitochondrial yes yes 2 3.4583E-46 274.2 By MS/MS By MS/MS 5.25 0.433 3 1 3 1 8588400 8498600 89780 12356 820 13160;13161 31158;31159;31160;31161 21970;21971;21972 21972 564 3 324040 265660 SDKETEKGASR LCRMMKHSMDQTGSKSDKETEKGASRIDEK TGSKSDKETEKGASRIDEKSSKAKVNDFLA K S D S R I 1 1 0 1 0 0 2 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 11 2 1206.584 Q14008 Q14008 1809 1819 CKAP5 Cytoskeleton-associated protein 5 yes yes 2;3 0.015277 112.13 By MS/MS 2 0 2 2 87865 87865 0 12357 1405 13162 31162;31163 21973;21974 21974 2 4367.4 0 SDKMNIFGGFR PLDRLKIMMQVHGSKSDKMNIFGGFRQMVK HGSKSDKMNIFGGFRQMVKEGGIRSLWRGN K S D F R Q 0 1 1 1 0 0 0 2 0 1 0 1 1 2 0 1 0 0 0 0 0 0 11 1 1270.6128 Q6NUK1 Q6NUK1 229 239 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 3 0.026856 73.887 By MS/MS 7 0 1 1 1609600 1609600 0 12358 1690 13163 31164 21975 21975 1212 1 28765 0 SDKSELKAELER ______________________________ ______________________________ M S D E R K 1 1 0 1 0 0 3 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 12 2 1403.7256 Q13409 Q13409 2 13 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2;3 5.2809E-05 159.44 By MS/MS 5 0 2 2 4215500 4215500 0 12359 1365 13164 31165;31166 21976;21977 21977 2 173270 0 SDLGNLLK YVSALQYNPDLYCVRSDLGNLLKALGRLEE PDLYCVRSDLGNLLKALGRLEEAKACYLKA R S D L K A 0 0 1 1 0 0 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 858.48108 O15294 O15294 161 168 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.02399 101.6 By MS/MS 4 0 1 1 390170 390170 0 12360 167 13165 31167 21978 21978 1 10651 0 SDLLLSGR FIQEPAKNRPGPQTRSDLLLSGRDWNTLIV RPGPQTRSDLLLSGRDWNTLIVGKLSPWIR R S D G R D 0 1 0 1 0 0 0 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 8 0 859.47633 O14744 O14744 69 76 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.024577 101.33 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 3154100 2970600 183520 12361 125 13166 31168;31169;31170 21979;21980 21979 2 92093 543040 SDNKDDDIDIDAI VYSKAASVPKVETVKSDNKDDDIDIDAI__ VKSDNKDDDIDIDAI_______________ K S D A I - 1 0 1 6 0 0 0 0 0 3 0 1 0 0 0 1 0 0 0 0 0 0 13 1 1447.6314 P55010 P55010 419 431 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.026759 110.93 By MS/MS 6 0 1 1 1322500 1322500 0 12362 1021 13167 31171 21981 21981 1 10313 0 SDPAAFESR PFYDRYRDKIQLLRRSDPAAFESRLEKRSE IQLLRRSDPAAFESRLEKRSEFRKQPVGHS R S D S R L 2 1 0 1 0 0 1 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 9 0 978.44067 Q5TC12 Q5TC12 90 98 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 yes yes 2 0.020713 96.331 By MS/MS 7.5 0.5 1 1 2 906040 906040 0 12363 1637 13168 31172;31173 21982 21982 1 50757 0 SDPDACPTMPLLAMLLR LPALDEFPHPPKRLRSDPDACPTMPLLAML PDACPTMPLLAMLLRGLTQIQSRILGPGRK R S D L R G 2 1 0 2 1 0 0 0 0 0 4 0 2 0 3 1 1 0 0 0 0 0 17 0 1899.9257 P57678 P57678 205 221 GEMIN4 Gem-associated protein 4 yes yes 2 0.021861 58.511 By MS/MS 4 0 1 1 57356 57356 0 12364 1054 13169 31174 21983 21983 819;820 1 1565.7 0 SDPDHLAELVK FFRPGKFAEFDQIMKSDPDHLAELVKRVNH QIMKSDPDHLAELVKRVNHWLTCSRWKKVQ K S D V K R 1 0 0 2 0 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 0 0 11 0 1222.6194 Q9UM54 Q9UM54 772 782 MYO6 Unconventional myosin-VI yes yes 2 0.04953 76.843 By MS/MS 3 0 1 1 354730 354730 0 12365 2833 13170 31175 21984 21984 1 9260.3 0 SDPFLEFFR EVEARNLDKKDFLGKSDPFLEFFRQGDGKW KDFLGKSDPFLEFFRQGDGKWHLVYRSEVI K S D F R Q 0 1 0 1 0 0 1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 0 9 0 1156.5553 Q99829 Q99829 158 166 CPNE1 Copine-1 yes yes 2 0.0050027 115.71 By MS/MS 6 0 1 1 1509500 1509500 0 12366 2294 13171 31176 21985 21985 1 11771 0 SDPGLLTNTMDVFVK GLMYSIMVHALRAFRSDPGLLTNTMDVFVK SDPGLLTNTMDVFVKEPSFDWKNFEQKMLK R S D V K E 0 0 1 2 0 0 0 1 0 0 2 1 1 1 1 1 2 0 0 2 0 0 15 0 1635.8178 P78527 P78527 3993 4007 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.1272E-07 161.87 By MS/MS 2.5 1.12 2 2 2 2 8 1949800 1949800 0 12367 1197 13172;13173 31177;31178;31179;31180;31181;31182;31183;31184 21986;21987;21988;21989;21990;21991 21986 975 6 70961 0 SDPLLIGIPTSENPFK KASADLMSYCEEHARSDPLLIGIPTSENPF DPLLIGIPTSENPFKDKKTCIIL_______ R S D F K D 0 0 1 1 0 0 1 1 0 2 2 1 0 1 3 2 1 0 0 0 0 0 16 0 1726.9142 Q9UBI6 Q9UBI6 49 64 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 2 0.048364 65.574 By MS/MS 10 0 1 1 77142 77142 0 12368 2751 13174 31185 21992 21992 1 81994 0 SDPTSYAGYIEDLKK VFPKPVTALEYTFSRSDPTSYAGYIEDLKK SDPTSYAGYIEDLKKFLKPYTLEEQKNLTV R S D K K F 1 0 0 2 0 0 1 1 0 1 1 2 0 0 1 2 1 0 2 0 0 0 15 1 1685.8148 P54709 P54709 98 112 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 2 0.0081947 114.87 By MS/MS 7 0 1 1 1523000 1523000 0 12369 1017 13175 31186 21993 21993 1 27216 0 SDQDYILK SISVNNCVCHFSPLKSDQDYILKEGDLVKI CHFSPLKSDQDYILKEGDLVKIDLGVHVDG K S D L K E 0 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 8 0 980.48148 Q9UQ80 Q9UQ80 94 101 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.003788 144.09 By MS/MS 7 0 1 1 1186500 1186500 0 12370 2859 13176 31187 21994 21994 1 21202 0 SDQNLQTALELTR RACWVLHYFCEVKFKSDQNLQTALELTRRC FKSDQNLQTALELTRRCLIDDREMPVKVEA K S D T R R 1 1 1 1 0 2 1 0 0 0 3 0 0 0 0 1 2 0 0 0 0 0 13 0 1487.758 O95373 O95373 490 502 IPO7 Importin-7 yes yes 2 4.1897E-25 281.17 By MS/MS 3.5 1.12 1 1 1 1 4 5719800 5719800 0 12371 388 13177 31188;31189;31190;31191 21995;21996 21996 2 168240 0 SDQQLDCALDLMR ______________________________ ______________________________ M S D M R R 1 1 0 3 1 2 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 0 13 0 1563.7021 P47756 P47756 2 14 CAPZB F-actin-capping protein subunit beta yes yes 2 0.0049978 90.861 By MS/MS 8 0 1 1 82531 82531 0 12372 895 13178 31192 21997 21997 1 5444.5 0 SDQSRLDSELK ESFINNLRRRVDQLKSDQSRLDSELKNMQD DQLKSDQSRLDSELKNMQDMVEDYRNKYED K S D L K N 0 1 0 2 0 1 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1276.6259 P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 247 257 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.010365 103.91 By MS/MS By MS/MS 5.1 2.62 1 1 1 1 2 1 1 1 1 2 8 4099500 1261700 2837800 + 12373 450;45;32 13179 31193;31194;31195;31196;31197;31198;31199;31200;31201;31202 21998;21999;22000 21998 3 489880 5562200 SDQWKPLNLEEK NAENIQPGEQKYEYKSDQWKPLNLEEKKRY EYKSDQWKPLNLEEKKRYDREFLLGFQFIF K S D E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 1 1 0 1 0 0 0 0 12 1 1485.7464 Q04637 Q04637 598 609 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.00022074 164.13 By MS/MS 2.5 1.12 2 2 2 2 8 8452500 8452500 0 12374 1264 13180 31203;31204;31205;31206;31207;31208;31209;31210 22001;22002;22003;22004 22003 4 259770 0 SDRPELTGAK SPVEISEWLDQKLTKSDRPELTGAKVVVSG QKLTKSDRPELTGAKVVVSGGRGLKSGENF K S D A K V 1 1 0 1 0 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 10 1 1072.5513 P13804 P13804 207 216 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2;3 0.0005833 132.32 By MS/MS 8.33 0.471 2 1 3 13848000 13848000 0 12375 582 13181 31211;31212;31213 22005;22006 22006 2 925740 0 SDSAFFWEER VYAMKLLSKFEMIKRSDSAFFWEERDIMAF EMIKRSDSAFFWEERDIMAFANSPWVVQLF R S D E R D 1 1 0 1 0 0 2 0 0 0 0 0 0 2 0 2 0 1 0 0 0 0 10 0 1272.5411 O75116;Q13464 O75116 132 141 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 2 4.7617E-05 171.56 By MS/MS 3 0 1 1 220320 220320 0 12376 278;1373 13182 31214 22007 22007 1 5751.5 0 SDSEATISR LAQPRRTRLGSLSARSDSEATISRSSASSR GSLSARSDSEATISRSSASSRTAEAIIRSG R S D S R S 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 9 0 964.44615 Q5SW79 Q5SW79 1165 1173 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0001664 166.3 By MS/MS 2 0 1 1 605030 605030 0 12377 1621 13183 31215 22008 22008 1 30073 0 SDSEKLNLDSIIGR ______________________________ MSDSEKLNLDSIIGRLLEVQGSRPGKNVQL M S D G R L 0 1 1 2 0 0 1 1 0 2 2 1 0 0 0 3 0 0 0 0 0 0 14 1 1545.7999 P62136 P62136 2 15 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 1.7575E-07 210.95 By MS/MS 8.5 1.12 1 1 1 1 4 9297200 9297200 0 12378 1114 13184 31216;31217;31218;31219 22009;22010;22011 22009 3 799430 0 SDSFENPVLQQHFR GKMKAIVEKLRFTYRSDSFENPVLQQHFRN RSDSFENPVLQQHFRNLEALALDLMEPEQA R S D F R N 0 1 1 1 0 2 1 0 1 0 1 0 0 2 1 2 0 0 0 1 0 0 14 0 1702.8063 P12956 P12956 475 488 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2;3 4.5311E-12 202.03 By MS/MS 5 0 2 2 7544100 7544100 0 12379 569 13185 31220;31221 22012;22013 22013 2 310090 0 SDSGGSSSEPFDR YPPGVHPSGLVPRERSDSGGSSSEPFDRHA ERSDSGGSSSEPFDRHAPAMLRERGTPPVD R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 0.0040921 108.37 By MS/MS 2 0 1 1 253080 253080 0 12380 907 13186 31222 22014 22014 1 12579 0 SDSHDIPR GLLGWYMVKSGLEEKSDSHDIPRVSQYRLA KSGLEEKSDSHDIPRVSQYRLAAHLGSALV K S D P R V 0 1 0 2 0 0 0 0 1 1 0 0 0 0 1 2 0 0 0 0 0 0 8 0 925.42536 Q7KZN9 Q7KZN9 210 217 COX15 Cytochrome c oxidase assembly protein COX15 homolog yes yes 2 0.021557 104.75 By MS/MS 1.5 0.5 1 1 2 419630 419630 0 12381 1758 13187 31223;31224 22015 22015 1 20606 0 SDSPTGDVLLDETLK TMRKKRLLDRKVLLKSDSPTGDVLLDETLK SDSPTGDVLLDETLKHIKATEPTETVQTWI K S D L K H 0 0 0 3 0 0 1 1 0 0 3 1 0 0 1 2 2 0 0 1 0 0 15 0 1588.7832 Q9H4A5 Q9H4A5 110 124 GOLPH3L Golgi phosphoprotein 3-like yes yes 2 0.00033947 128.85 By MS/MS 8 0 1 1 480420 480420 0 12382 2498 13188 31225 22016 22016 1 31693 0 SDSRAQAVSEDAGGNEGR PAQGEAPGEQARDERSDSRAQAVSEDAGGN RAQAVSEDAGGNEGRAAEAEPRALENGDAD R S D G R A 3 2 1 2 0 1 2 3 0 0 0 0 0 0 0 3 0 0 0 1 0 0 18 1 1804.7936 P55884 P55884 117 134 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.0039998 70.987 By MS/MS By MS/MS 4 0 2 1 1 569040 526570 42479 12383 1040 13189 31226;31227 22017;22018 22018 2 14375 88763 SDSWSLANLSSTK GDRHISAHKFVLAARSDSWSLANLSSTKEL ARSDSWSLANLSSTKELDLSDANPEVTMTM R S D T K E 1 0 1 1 0 0 0 0 0 0 2 1 0 0 0 5 1 1 0 0 0 0 13 0 1394.6678 Q9P2R3 Q9P2R3 90 102 ANKFY1 Rabankyrin-5 yes yes 2 1.0483E-11 202.05 By MS/MS 3.5 0.5 1 1 2 950080 950080 0 12384 2740 13190 31228;31229 22019 22019 1 25702 0 SDTIDTVSVPYVFR SAMRNRKYNCTLCSRSDTIDTVSVPYVFRY RSDTIDTVSVPYVFRYFVAELAAMNIKVKL R S D F R Y 0 1 0 2 0 0 0 0 0 1 0 0 0 1 1 2 2 0 1 3 0 0 14 0 1597.7988 Q9H9Y6 Q9H9Y6 1104 1117 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 2 6.5041E-05 152.54 By MS/MS 4 0 1 1 568760 568760 0 12385 2540 13191 31230 22020 22020 1 15526 0 SDTPLIYK LVATTFTHSYPFCWRSDTPLIYKAVPSWFV SYPFCWRSDTPLIYKAVPSWFVRVENMVDQ R S D Y K A 0 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 1 0 1 0 0 0 8 0 935.4964 P41252 P41252 403 410 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0085164 137.18 By MS/MS 3.5 0.5 1 1 2 4159700 4159700 0 12386 840 13192 31231;31232 22021 22021 1 109330 0 SDTQLVVR VERRNRVLAGLYMGRSDTQLVVRQASLHVW AGLYMGRSDTQLVVRQASLHVWKIVVSNTP R S D V R Q 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 2 0 0 8 0 916.49779 Q92616 Q92616 1894 1901 GCN1L1 Translational activator GCN1 yes yes 2 0.0034263 160.11 By MS/MS 3.5 1.12 1 1 1 1 4 5048300 5048300 0 12387 2068 13193 31233;31234;31235;31236 22022;22023;22024 22022 3 217610 0 SDTSESGAGLTR ______________________________ ______________________________ M S D T R F 1 1 0 1 0 0 1 2 0 0 1 0 0 0 0 3 2 0 0 0 0 0 12 0 1179.5368 Q9UNF1 Q9UNF1 2 13 MAGED2 Melanoma-associated antigen D2 yes yes 2 1.6873E-07 219.5 By MS/MS 5 0 1 1 1457900 1457900 0 12388 2840 13194 31237 22025 22025 1 59926 0 SDVASVNWSAPSQAFPR PHVPHRGELEKLFPRSDVASVNWSAPSQAF VASVNWSAPSQAFPRITQLLGLPTYRYHVL R S D P R I 3 1 1 1 0 1 0 0 0 0 0 0 0 1 2 4 0 1 0 2 0 0 17 0 1817.8697 Q9BTW9 Q9BTW9 952 968 TBCD Tubulin-specific chaperone D yes yes 2 1.6487E-06 139.74 By MS/MS 3.5 0.5 1 1 2 892550 892550 0 12389 2354 13195 31238;31239 22026 22026 1 24152 0 SDVDLYQVR IGMNEPLVDCEGYPRSDVDLYQVRTARHNI CEGYPRSDVDLYQVRTARHNIICLQNDHKA R S D V R T 0 1 0 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 9 0 1093.5404 O00233 O00233 65 73 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 2 0.0012307 138.1 By MS/MS By matching 8 2.1 1 1 2 1 2 3 1407600 908770 498860 12390 82 13196 31240;31241;31242;31243;31244 22027 22027 1 606250 2826200 SDVEAIAK GFSHPLTQSAVMGHRSDVEAIAKLITSFLE SAVMGHRSDVEAIAKLITSFLELHCLESPT R S D A K L 2 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 8 0 831.4338 Q9BQA9 Q9BQA9 148 155 C17orf62 Uncharacterized protein C17orf62 yes yes 2 0.008849 122.74 By MS/MS 9 0 1 1 420200 420200 0 12391 2310 13197 31245 22028 22028 1 241160 0 SDVEAIFSK SRVFIGNLNTLVVKKSDVEAIFSKYGKIVG TLVVKKSDVEAIFSKYGKIVGCSVHKGFAF K S D S K Y 1 0 0 1 0 0 1 0 0 1 0 1 0 1 0 2 0 0 0 1 0 0 9 0 994.49713 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 31 39 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 0.0010788 140.35 By MS/MS 7 0 1 1 2450500 2450500 0 12392 495 13198 31246 22029 22029 1 43791 0 SDVLQPGAEVTTDDR ECMKLLPVYLNCVLKSDVLQPGAEVTTDDR SDVLQPGAEVTTDDRAYVRQLVTSMDVTET K S D D R A 1 1 0 3 0 1 1 1 0 0 1 0 0 0 1 1 2 0 0 2 0 0 15 0 1601.7533 P53992 P53992 914 928 SEC24C Protein transport protein Sec24C yes yes 2 0.0024413 113.69 By MS/MS 4 0 1 1 614140 614140 0 12393 1009 13199 31247 22030 22030 1 16765 0 SDYDGIGSR DRGSGSRGRFDDRGRSDYDGIGSRGDRSGF FDDRGRSDYDGIGSRGDRSGFGKFERGGNS R S D S R G 0 1 0 2 0 0 0 2 0 1 0 0 0 0 0 2 0 0 1 0 0 0 9 0 968.41994 O00571 O00571 102 110 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.0028097 121.09 By MS/MS By matching 5 0 2 1 1 2892100 2843000 49146 12394 105 13200 31248;31249 22031 22031 1 116860 145420 SDYDMVDYLNELR VLNTLQQASQAQVDKSDYDMVDYLNELRES DKSDYDMVDYLNELRESCLEAYTGIVQGLK K S D L R E 0 1 1 3 0 0 1 0 0 0 2 0 1 0 0 1 0 0 2 1 0 0 13 0 1631.7137 Q14974 Q14974 750 762 KPNB1 Importin subunit beta-1 yes yes 2 1.3049E-11 199.03 By MS/MS 4.33 0.471 2 1 3 1294200 1294200 0 12395 1452 13201;13202 31250;31251;31252 22032;22033 22032 1140 1 45679 0 SDYDREALLGVQEDVDEYVK AGKAEELHYPLGERRSDYDREALLGVQEDV EALLGVQEDVDEYVKLGHEEQQKRLQAIIK R S D V K L 1 1 0 4 0 1 3 1 0 0 2 1 0 0 0 1 0 0 2 3 0 0 20 1 2342.0914 Q14257 Q14257 37 56 RCN2 Reticulocalbin-2 yes yes 2;3 2.4199E-05 123.36 By MS/MS 6 0 2 2 7932300 7932300 0 12396 1426 13203 31253;31254 22034;22035 22034 2 61856 0 SDYSEAAK GTKQITQSALLAEARSDYSEAAKQYDEALN ALLAEARSDYSEAAKQYDEALNKQDWVDGE R S D A K Q 2 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 0 0 8 0 869.37668 P78527 P78527 2963 2970 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0020118 157.33 By MS/MS 1.5 0.5 1 1 2 2748700 2748700 0 12397 1197 13204 31255;31256 22036;22037 22036 2 135040 0 SEADVAQQFQYAVR PNVLLQNLCCRILGRSEADVAQQFQYAVRV RSEADVAQQFQYAVRVIGSNFAPTVERDEF R S E V R V 3 1 0 1 0 3 1 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 14 0 1610.7689 Q96CW5 Q96CW5 24 37 TUBGCP3 Gamma-tubulin complex component 3 yes yes 2 4.6296E-35 257.8 By MS/MS 4 0 1 1 640690 640690 0 12398 2143 13205 31257 22038 22038 1 17490 0 SEAGLAGAPAR NEIVTQIDAQNKLEKSEAGLAGAPARAVSA KLEKSEAGLAGAPARAVSAVKNMNLPEIPR K S E A R A 4 1 0 0 0 0 1 2 0 0 1 0 0 0 1 1 0 0 0 0 0 0 11 0 998.51451 Q92572 Q92572 150 160 AP3S1 AP-3 complex subunit sigma-1 yes yes 2 9.4702E-06 175.51 By MS/MS 9 0 1 1 697680 697680 0 12399 2060 13206 31258 22039 22039 1 400400 0 SEAIQVTTK NTLKDFEEGCYLLCKSEAIQVTTKDILVTE CYLLCKSEAIQVTTKDILVTEKGNTVLEFL K S E T K D 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 2 0 0 1 0 0 9 0 975.52368 O15228 O15228 546 554 GNPAT Dihydroxyacetone phosphate acyltransferase yes yes 2 0.014596 99.788 By MS/MS 5 0 1 1 700360 700360 0 12400 160 13207 31259 22040 22040 1 28788 0 SEAMLAEAHPEIR TQSFSLVKATSVTEKSEAMLAEAHPEIREA EKSEAMLAEAHPEIREAKAVGTQPHPLEES K S E I R E 3 1 0 0 0 0 3 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 13 0 1452.7031 Q8N3K9 Q8N3K9 2598 2610 CMYA5 Cardiomyopathy-associated protein 5 yes yes 2 0.019674 79.489 By MS/MS 6 0 1 1 2127700 2127700 0 12401 1910 13208 31260 22041;22042 22042 1295 2 16592 0 SEANATQLLR LKSLLLTVSQYKAVKSEANATQLLRHLEVI YKAVKSEANATQLLRHLEVISGQKLTRLFT K S E L R H 2 1 1 0 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1101.5778 Q8TCG1 Q8TCG1 22 31 KIAA1524 Protein CIP2A yes yes 2 4.5964E-09 192.91 By MS/MS 4 0 1 1 0 0 0 12402 1994 13209 31261 22043 22043 1 0 0 SEAPNWATQDSGFY MLAMNIEKKLNQNSRSEAPNWATQDSGFY_ RSEAPNWATQDSGFY_______________ R S E F Y - 2 0 1 1 0 1 1 1 0 0 0 0 0 1 1 2 1 1 1 0 0 0 14 0 1571.6529 P60228 P60228 432 445 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 9.4225E-08 177.04 By MS/MS 8.5 1.12 1 1 1 1 4 1516100 1516100 0 12403 1065 13210 31262;31263;31264;31265 22044;22045 22044 2 144230 0 SEAVVEYVFSGSR QKAKQFLPFLQRAGRSEAVVEYVFSGSRLK GRSEAVVEYVFSGSRLKLYLPKETCLITFL R S E S R L 1 1 0 0 0 0 2 1 0 0 0 0 0 1 0 3 0 0 1 3 0 0 13 0 1428.6885 Q7KZF4 Q7KZF4 527 539 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 3.4577E-08 218.15 By MS/MS 4 0 1 1 1495200 1495200 0 12404 1757 13211 31266 22046 22046 1 40817 0 SECLNNIGDSSPLIR AHFQNFPNGVTDFIKSECLNNIGDSSPLIR SECLNNIGDSSPLIRATVGILITTIASKGE K S E I R A 0 1 2 1 1 0 1 1 0 2 2 0 0 0 1 3 0 0 0 0 0 0 15 0 1673.8043 Q92973 Q92973 101 115 TNPO1 Transportin-1 yes yes 2 2.4517E-20 215.02 By MS/MS 4.5 0.5 1 1 2 5234200 5234200 0 12405 2093 13212 31267;31268 22047;22048 22047 2 162210 0 SEDFSLPAYMDR ISTSVCVRAHESVVKSEDFSLPAYMDRRDH VVKSEDFSLPAYMDRRDHPLPEVAHVKHLS K S E D R R 1 1 0 2 0 0 1 0 0 0 1 0 1 1 1 2 0 0 1 0 0 0 12 0 1429.6184 P13073 P13073 30 41 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.00016625 154.24 By MS/MS 10 0 2 2 902170 902170 0 12406 571 13213;13214 31269;31270 22049;22050 22050 360 2 958910 0 SEDFSLPAYMDRR ISTSVCVRAHESVVKSEDFSLPAYMDRRDH VKSEDFSLPAYMDRRDHPLPEVAHVKHLSA K S E R R D 1 2 0 2 0 0 1 0 0 0 1 0 1 1 1 2 0 0 1 0 0 0 13 1 1585.7195 P13073 P13073 30 42 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 3 0.008301 90.653 By MS/MS 10 0 1 1 830730 830730 0 12407 571 13215 31271 22051 22051 1 882980 0 SEDLDNSIDKTEAGIK ELEAINKRVKDTMARSEDLDNSIDKTEAGI EDLDNSIDKTEAGIKELQKSMERWKNMEKE R S E I K E 1 0 1 3 0 0 2 1 0 2 1 2 0 0 0 2 1 0 0 0 0 0 16 1 1733.8319 Q9UQE7 Q9UQE7 880 895 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.03379 61.097 By MS/MS 3 0 1 1 1246100 1246100 0 12408 2860 13216 31272 22052 22052 1 32530 0 SEDLLDYGPFR SRNVESYTKLGNPTRSEDLLDYGPFRDVPA NPTRSEDLLDYGPFRDVPAYSQDTFKVHYE R S E F R D 0 1 0 2 0 0 1 1 0 0 2 0 0 1 1 1 0 0 1 0 0 0 11 0 1310.6143 P04843 P04843 194 204 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.00034755 148.94 By MS/MS 4.57 2.44 1 1 1 1 1 1 1 7 5088000 5088000 0 12409 458 13217 31273;31274;31275;31276;31277;31278;31279 22053;22054;22055 22054 3 191860 0 SEDPDQQYLILNTAR ADEQSLVGRFIHLLRSEDPDQQYLILNTAR SEDPDQQYLILNTARKHFGAGGNQRIRFTL R S E A R K 1 1 1 2 0 2 1 0 0 1 2 0 0 0 1 1 1 0 1 0 0 0 15 0 1761.8533 Q96QK1 Q96QK1 500 514 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 2.0718E-28 237.07 By MS/MS 5.75 1.48 1 1 1 1 4 14059000 14059000 0 12410 2242 13218 31280;31281;31282;31283 22056;22057;22058 22056 3 506140 0 SEDPPDELGPPLAER PFSTATQRTAGEDCRSEDPPDELGPPLAER SEDPPDELGPPLAERALRVKAVKLEKEVQD R S E E R A 1 1 0 2 0 0 3 1 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 0 1620.7631 Q8TAA5 Q8TAA5 46 60 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.00010542 136.38 By MS/MS 9 0 1 1 479280 479280 0 12411 1979 13219 31284 22059 22059 1 275060 0 SEDQNCVPPLQER KPMMPQESLNGTGCRSEDQNCVPPLQERKV CRSEDQNCVPPLQERKVTPIDSPPVWSPEG R S E E R K 0 1 1 1 1 2 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 13 0 1570.7046 Q5JSZ5 Q5JSZ5 721 733 PRRC2B Protein PRRC2B yes yes 2 0.0039797 108.98 By MS/MS 2.5 0.5 1 1 2 364290 364290 0 12412 1608 13220 31285;31286 22060 22060 1 14728 0 SEDTGLDSVATR QEEARAVEKDKSKARSEDTGLDSVATRTPM KARSEDTGLDSVATRTPMEHVTPKPETHLA R S E T R T 1 1 0 2 0 0 1 1 0 0 1 0 0 0 0 2 2 0 0 1 0 0 12 0 1249.5786 O94966 O94966 434 445 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 2 4.2351E-07 183.03 By MS/MS 3.5 0.5 1 1 2 1109900 1109900 0 12413 361 13221 31287;31288 22061 22061 1 29719 0 SEDTTGPITGLALTSVNK IEPNVFLRPFLEVIRSEDTTGPITGLALTS TTGPITGLALTSVNKFLSYALIDPTHEGTA R S E N K F 1 0 1 1 0 0 1 2 0 1 2 1 0 0 1 2 4 0 0 1 0 0 18 0 1802.9262 Q92538 Q92538 74 91 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 2.5796E-55 276.71 By MS/MS 3 1.41 1 1 1 1 1 5 1793700 1793700 0 12414 2055 13222 31289;31290;31291;31292;31293 22062 22062 1 72117 0 SEDYVDIVQGR SNFWGALSADGYYARSEDYVDIVQGRRVGV YYARSEDYVDIVQGRRVGVWNVPYISNIYL R S E G R R 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 2 0 0 11 0 1279.6044 Q02809 Q02809 431 441 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 1.8928E-07 192.26 By MS/MS By matching 5 0 2 1 1 3475000 3450500 24581 12415 1256 13223 31294;31295 22063 22063 1 141830 72735 SEEEIDFLR QFQSFSQYRCKTAKKSEEEIDFLRSNPKIW CKTAKKSEEEIDFLRSNPKIWNVHSVLNVL K S E L R S 0 1 0 1 0 0 3 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1136.535 Q9Y262 Q9Y262 208 216 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 8.5451E-05 190.51 By MS/MS By MS/MS 5 1.91 1 2 2 1 4 2 8015800 7891100 124750 12416 2868 13224 31296;31297;31298;31299;31300;31301 22064;22065;22066;22067;22068 22067 5 191670 380970 SEENTKEEKPDSK ESMGGKVPPATQKAKSEENTKEEKPDSKKV AKSEENTKEEKPDSKKVEEDLKADEPSSEE K S E S K K 0 0 1 1 0 0 4 0 0 0 0 3 0 0 1 2 1 0 0 0 0 0 13 2 1519.7002 P50502;Q8IZP2;Q8NFI4 P50502 51 63 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 2 2.8348E-07 192.68 By MS/MS 6 0 1 1 449830 449830 0 12417 948 13225 31302 22069 22069 1 3507.8 0 SEEPETPAAYR WLRQVWGEVPEPSDRSEEPETPAAYRART_ PSDRSEEPETPAAYRART____________ R S E Y R A 2 1 0 0 0 0 3 0 0 0 0 0 0 0 2 1 1 0 1 0 0 0 11 0 1248.5622 Q4G0I0 Q4G0I0 119 129 CCSMST1 Protein CCSMST1 yes yes 2 0.0016294 117.53 By MS/MS 10 0 1 1 203530 203530 0 12418 1576 13226 31303 22070 22070 1 216330 0 SEEPEVPDQEGLQR VPGTPGLPGSTGNPKSEEPEVPDQEGLQRI KSEEPEVPDQEGLQRITGLSPGRSALIVAV K S E Q R I 0 1 0 1 0 2 4 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 14 0 1611.7376 Q9H2V7 Q9H2V7 36 49 SPNS1 Protein spinster homolog 1 yes yes 2 0.00098416 108.72 By MS/MS 2 0.816 1 1 1 3 3292900 3292900 0 12419 2484 13227 31304;31305;31306 22071;22072;22073 22071 3 140300 0 SEEQLKEEGIEYK PSVIYTHPEVAWVGKSEEQLKEEGIEYKVG GKSEEQLKEEGIEYKVGKFPFAANSRAKTN K S E Y K V 0 0 0 0 0 1 5 1 0 1 1 2 0 0 0 1 0 0 1 0 0 0 13 1 1580.757 P09622 P09622 405 417 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 3 0.0021378 104.81 By MS/MS By matching 6.33 0.471 2 1 2 1 10513000 10416000 97928 12420 518 13228 31307;31308;31309 22074 22074 1 85381 300340 SEETNQQEVANSLAK LFNYDYTLEESGIQKSEETNQQEVANSLAK SEETNQQEVANSLAKLSVHALSRLGGYLAE K S E A K L 2 0 2 0 0 2 3 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 15 0 1646.7748 O75165 O75165 1566 1580 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 2.2995E-38 261.38 By MS/MS 2.5 1.12 1 1 1 1 4 1927000 1927000 0 12421 287 13229 31310;31311;31312;31313 22075;22076;22077 22075 3 83797 0 SEGALELADVSNELPGLK NPIEDEAVIASLLEKSEGALELADVSNELP ALELADVSNELPGLKWMPGITQWKVMTKDG K S E L K W 2 0 1 1 0 0 3 2 0 0 4 1 0 0 1 2 0 0 0 1 0 0 18 0 1840.9418 Q08J23 Q08J23 339 356 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 4.7471E-69 300.49 By MS/MS 4.67 0.471 1 2 3 1977500 1977500 0 12422 1295 13230 31314;31315;31316 22078;22079 22078 2 57334 0 SEGDSVGESVHGK ______________________________ ______________________________ M S E G K P 0 0 0 1 0 0 2 3 1 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1286.5739 O15258 O15258 2 14 RER1 Protein RER1 yes yes 2 0.0047621 91.701 By MS/MS 1 0 1 1 200740 200740 0 12423 163 13231 31317 22080 22080 1 9807.7 0 SEGDSVGESVHGKPSVVYR ______________________________ SVGESVHGKPSVVYRFFTRLGQIYQSWLDK M S E Y R F 0 1 0 1 0 0 2 3 1 0 0 1 0 0 1 4 0 0 1 4 0 0 19 1 1987.9599 O15258 O15258 2 20 RER1 Protein RER1 yes yes 3 0.0022532 99.055 By MS/MS 3.8 2.79 1 1 1 1 1 5 3753600 3753600 0 12424 163 13232 31318;31319;31320;31321;31322 22081;22082;22083;22084 22081 4 380640 0 SEGEGEAASADDGSLNTSGAGPK AEDRAVGAQASVGSRSEGEGEAASADDGSL SADDGSLNTSGAGPKSWQVPPPAPEVQIRT R S E P K S 4 0 1 2 0 0 3 5 0 0 1 1 0 0 1 4 1 0 0 0 0 0 23 0 2105.8985 Q9NWV8 Q9NWV8 49 71 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 2 3.2882E-16 175.26 By MS/MS 7 0 1 1 1213900 1213900 0 12425 2672 13233 31323 22085 22085 1 21692 0 SEGGEDYTGATVIEPLK LRQAMHEGLLMPVVKSEGGEDYTGATVIEP GGEDYTGATVIEPLKGYYDVPIATLDFSSL K S E L K G 1 0 0 1 0 0 3 3 0 1 1 1 0 0 1 1 2 0 1 1 0 0 17 0 1764.8418 P28340 P28340 575 591 POLD1 DNA polymerase delta catalytic subunit yes yes 2 1.1816E-13 222.94 By MS/MS 3.5 0.5 1 1 2 1687100 1687100 0 12426 719 13234 31324;31325 22086;22087 22087 2 44449 0 SEGLLYVHSSR DIVDAKLKIPVSGSKSEGLLYVHSSRGGPF SGSKSEGLLYVHSSRGGPFQRWHLDEVFLE K S E S R G 0 1 0 0 0 0 1 1 1 0 2 0 0 0 0 3 0 0 1 1 0 0 11 0 1246.6306 Q9GZY4 Q9GZY4 98 108 COA1 Cytochrome c oxidase assembly factor 1 homolog yes yes 2 0.00093722 145.99 By MS/MS 10 0 1 1 484210 484210 0 12427 2444 13235 31326 22088 22088 1 514670 0 SEGPQVFYK KVYNTLRHAVGTMYRSEGPQVFYKGLAPTL VGTMYRSEGPQVFYKGLAPTLIAIFPYAGL R S E Y K G 0 0 0 0 0 1 1 1 0 0 0 1 0 1 1 1 0 0 1 1 0 0 9 0 1053.5131 Q9HC21 Q9HC21 168 176 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0028304 120.87 By MS/MS 8 0 1 1 2171500 2171500 0 12428 2556 13236 31327 22089 22089 1 143250 0 SEGVVAVLLTK GTCKAFDTAGNGYCRSEGVVAVLLTKKSLA GYCRSEGVVAVLLTKKSLARRVYATILNAG R S E T K K 1 0 0 0 0 0 1 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 11 0 1114.6598 P49327 P49327 225 235 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.0715E-17 232.41 By MS/MS 3.9 2.12 1 2 2 2 1 1 1 10 16892000 16892000 0 12429 915 13237 31328;31329;31330;31331;31332;31333;31334;31335;31336;31337 22090;22091;22092;22093;22094;22095;22096;22097;22098;22099 22096 10 592960 0 SEGVVAVLLTKK GTCKAFDTAGNGYCRSEGVVAVLLTKKSLA YCRSEGVVAVLLTKKSLARRVYATILNAGT R S E K K S 1 0 0 0 0 0 1 1 0 0 2 2 0 0 0 1 1 0 0 3 0 0 12 1 1242.7547 P49327 P49327 225 236 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 1.6637E-10 205.53 By MS/MS 3.56 2.09 3 3 3 2 2 1 1 1 16 8454400 8454400 0 12430 915 13238 31338;31339;31340;31341;31342;31343;31344;31345;31346;31347;31348;31349;31350;31351;31352;31353 22100;22101;22102;22103;22104;22105 22102 6 258210 0 SEGYFGMYR RVYTSMSDCLIKTVRSEGYFGMYRGAAVNL LIKTVRSEGYFGMYRGAAVNLTLVTPEKAI R S E Y R G 0 1 0 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 2 0 0 0 9 0 1108.4648 Q9H936 Q9H936 59 67 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 1.0991E-05 176.41 By MS/MS 8 0 1 1 1824400 1824400 0 12431 2528 13239 31354 22106 22106 1 120360 0 SEHLSVRPQTALEENETQK GEARTQHGGSHVSRKSEHLSVRPQTALEEN SVRPQTALEENETQKEVPQDQHLEAPADQS K S E Q K E 1 1 1 0 0 2 4 0 1 0 2 1 0 0 1 2 2 0 0 1 0 0 19 1 2195.0818 Q9Y3D9 Q9Y3D9 151 169 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 3;4 0.0001796 117.13 By MS/MS 9 0 2 2 4310800 4310800 0 12432 2935 13240 31355;31356 22107;22108 22107 2 2474000 0 SEIDNVKK KIEISELNRVIQRLRSEIDNVKKQISNLQQ RVIQRLRSEIDNVKKQISNLQQSISDAEQR R S E K K Q 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 8 1 931.49746 P04264;CON__P04264;CON__Q5XQN5 P04264 410 417 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.040142 129.68 By matching By MS/MS 3.17 1.34 1 1 1 2 1 2 4 1866700 1091800 774830 + 12433 450;45;61 13241 31357;31358;31359;31360;31361;31362 22109;22110 22110 2 32680 993740 SEISELRR NREVATNSELVQSGKSEISELRRTMQNLEI ELVQSGKSEISELRRTMQNLEIELQSQLSM K S E R R T 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 8 1 988.53016 CON__P02533;P02533;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 329 336 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 2 0.0041818 176.41 By matching By MS/MS 5.91 3.03 1 1 1 1 1 1 1 1 1 2 1 10 2526500 235160 2291400 + 12434 35;54 13242 31363;31364;31365;31366;31367;31368;31369;31370;31371;31372;31373 22111;22112 22112 2 249950 6489600 SEITELR TTEIDNNIEQISSYKSEITELRRNVQALEI IEQISSYKSEITELRRNVQALEIELQSQLA K S E L R R 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 7 0 846.4447 CON__P13645;P13645;CON__P02535-1 CON__P13645 363 369 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.053886 100.19 By MS/MS 5 1.41 1 1 1 1 1 5 641510 0 641510 + 12435 49 13243 31374;31375;31376;31377;31378 22113 22113 1 0 1770600 SEITELRR TTEIDNNIEQISSYKSEITELRRNVQALEI EQISSYKSEITELRRNVQALEIELQSQLAL K S E R R N 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 1 1002.5458 CON__P13645;P13645;CON__P02535-1 CON__P13645 363 370 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.014108 148.04 By matching By MS/MS 3.25 1.56 1 2 2 1 1 1 3 5 7667000 3466900 4200000 + 12436 49 13244 31379;31380;31381;31382;31383;31384;31385;31386 22114;22115;22116;22117 22116 4 113750 7810200 SEIVPLFTSLASDEQDSVR KLGEFAKVLELDSVKSEIVPLFTSLASDEQ PLFTSLASDEQDSVRLLAVEACVSIAQLLS K S E V R L 1 1 0 2 0 1 2 0 0 1 2 0 0 1 1 4 1 0 0 2 0 0 19 0 2092.0324 P30154 P30154 215 233 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 2 1.7133E-07 173.25 By MS/MS 6 0 1 1 833230 833230 0 12437 738 13245 31387 22118 22118 1 6497.5 0 SEKENNFPPLPK ______________________________ ______________________________ M S E P K F 0 0 2 0 0 0 2 0 0 0 1 2 0 1 3 1 0 0 0 0 0 0 12 1 1398.7143 Q969E2 Q969E2 2 13 SCAMP4 Secretory carrier-associated membrane protein 4 yes yes 2 0.00093007 166.66 By MS/MS 6.67 4.03 1 1 1 3 1184600 1184600 0 12438 2101 13246 31388;31389;31390 22119;22120 22119 2 382180 0 SEKPHDRDR YGLDSGFCTISRLPRSEKPHDRDRDGSFPS ISRLPRSEKPHDRDRDGSFPSEPGLRRSDS R S E D R D 0 2 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 9 2 1138.5479 Q00587 Q00587 169 177 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.0033867 155.42 By MS/MS 6 0 1 1 271900 271900 0 12439 1234 13247 31391 22121 22121 1 2120.3 0 SEKREPVR RVTSSEPPNPASSSKSEKREPVRKRVLEKR NPASSSKSEKREPVRKRVLEKRGDDFKKEG K S E V R K 0 2 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 8 2 999.54614 Q92575 Q92575 460 467 UBXN4 UBX domain-containing protein 4 yes yes 3 0.050359 98.299 By MS/MS 6 0 1 1 0 0 0 12440 2062 13248 31392 22122 22122 1 0 0 SELDQLRQEAEQLK ______________________________ MSELDQLRQEAEQLKNQIRDARKACADATL M S E L K N 1 1 0 1 0 3 3 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 14 1 1685.8584 P62873 P62873 2 15 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 2 0.0091444 110.38 By MS/MS 8 0 1 1 279450 279450 0 12441 1154 13249 31393 22123 22123 1 18435 0 SELEDFELDK DLDDILESITNRMIKSELEDFELDKSADFS NRMIKSELEDFELDKSADFSQSTSIGIKNN K S E D K S 0 0 0 2 0 0 3 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 10 0 1223.5558 Q9NVI1 Q9NVI1 716 725 FANCI Fanconi anemia group I protein yes yes 2 6.218E-11 209.6 By MS/MS 3 0 1 1 1305700 1305700 0 12442 2654 13250 31394 22124 22124 1 34086 0 SELEQLRQEAEQLR ______________________________ MSELEQLRQEAEQLRNQIRDARKACGDSTL M S E L R N 1 2 0 0 0 3 4 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 14 1 1727.8802 P62879;Q9HAV0 P62879 2 15 GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 yes no 2 0.00073964 137.4 By MS/MS 8 0 1 1 787920 787920 0 12443 1156 13251 31395 22125 22125 1 51979 0 SELFSGLPQKK VLQQVIEDGSKYGLKSELFSGLPQKKIVVE YGLKSELFSGLPQKKIVVEFSSPNVAKKFH K S E K K I 0 0 0 0 0 1 1 1 0 0 2 2 0 1 1 2 0 0 0 0 0 0 11 1 1232.6765 Q5T160 Q5T160 116 126 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 0.024966 101.65 By MS/MS 6 0 1 1 4356600 4356600 0 12444 1624 13252 31396 22126 22126 1 33973 0 SELGNQSPSTSSR TARIRTRMQNDSILKSELGNQSPSTSSRQV LKSELGNQSPSTSSRQVTGQPQNASFVKRN K S E S R Q 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 5 1 0 0 0 0 0 13 0 1348.6219 Q5JTV8 Q5JTV8 309 321 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 1.3484E-11 198.52 By MS/MS 6.5 0.5 1 1 2 3454200 3454200 0 12445 1610 13253 31397;31398 22127 22127 1 29829 0 SELLNELMDSAK WKMLGLFRKHNKIPRSELLNELMDSAKVSN IPRSELLNELMDSAKVSNSPSQAIEVVELA R S E A K V 1 0 1 1 0 0 2 0 0 0 3 1 1 0 0 2 0 0 0 0 0 0 12 0 1348.6544 Q96EY7 Q96EY7 608 619 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 9.3833E-33 252.97 By MS/MS 5.25 0.433 3 1 4 5941100 5941100 0 12446 2170 13254;13255 31399;31400;31401;31402 22128;22129;22130 22129 1397 3 239480 0 SELLSQLQQHEEESR SAVADSLPFDKQTTKSELLSQLQQHEEESR SELLSQLQQHEEESRAQRDAKRPKISFSNI K S E S R A 0 1 0 0 0 3 4 0 1 0 3 0 0 0 0 3 0 0 0 0 0 0 15 0 1811.865 Q92665 Q92665 175 189 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2;3 6.9367E-15 211.22 By MS/MS 7.5 0.5 2 2 4 30134000 30134000 0 12447 2073 13256 31403;31404;31405;31406 22131;22132 22132 2 563150 0 SELPDSIESALQGDER TLCRGSPVVTHDLLRSELPDSIESALQGDE ELPDSIESALQGDERCVLDTMRLVDLLLVL R S E E R C 1 1 0 2 0 1 3 1 0 1 2 0 0 0 1 3 0 0 0 0 0 0 16 0 1744.8115 Q9ULT8 Q9ULT8 300 315 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 2.35E-07 160.22 By MS/MS 4 1.41 1 1 1 1 1 5 2751300 2751300 0 12448 2826 13257 31407;31408;31409;31410;31411 22133;22134 22134 2 51419 0 SELPLDPLPVPTEEGNPLLK RTESRSTEPELIQVKSELPLDPLPVPTEEG DPLPVPTEEGNPLLKHYRGPAGDATVASEK K S E L K H 0 0 1 1 0 0 3 1 0 0 5 1 0 0 5 1 1 0 0 1 0 0 20 0 2157.1569 Q15758 Q15758 503 522 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 5.3036E-08 163.62 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 21533000 21533000 0 12449 1518 13258 31412;31413;31414;31415;31416;31417;31418;31419;31420;31421 22135;22136;22137;22138;22139;22140;22141;22142;22143;22144;22145 22142 11 715100 0 SELVAMLEEEELR YVVDSCDRDRIGISKSELVAMLEEEELRKA SKSELVAMLEEEELRKAILVVFANKQDMEQ K S E L R K 1 1 0 0 0 0 5 0 0 0 3 0 1 0 0 1 0 0 0 1 0 0 13 0 1546.7549 P40616 P40616 105 117 ARL1 ADP-ribosylation factor-like protein 1 yes yes 2 1.3092E-05 186.87 By MS/MS 9.5 0.5 2 2 4 510960 510960 0 12450 830 13259;13260 31422;31423;31424;31425 22146;22147;22148 22146 577 3 341820 0 SELVAMLEEEELRK YVVDSCDRDRIGISKSELVAMLEEEELRKA KSELVAMLEEEELRKAILVVFANKQDMEQA K S E R K A 1 1 0 0 0 0 5 0 0 0 3 1 1 0 0 1 0 0 0 1 0 0 14 1 1674.8498 P40616 P40616 105 118 ARL1 ADP-ribosylation factor-like protein 1 yes yes 2 7.7772E-08 190.53 By MS/MS 9 0 1 1 401130 401130 0 12451 830 13261 31426 22149 22149 577 1 230210 0 SELVANNVTLPAGEQR EFLEDPSVLTKDKLKSELVANNVTLPAGEQ ELVANNVTLPAGEQRKDVYVQLYLQHLTAR K S E Q R K 2 1 2 0 0 1 2 1 0 0 2 0 0 0 1 1 1 0 0 2 0 0 16 0 1696.8744 P42166;P42167 P42167 18 33 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.00043347 124.45 By MS/MS 6.5 0.5 1 1 2 3404600 3404600 0 12452 846;845 13262 31427;31428 22150 22150 1 29731 0 SENAVVDGPFLVEK MDLETKMVSVLPIFRSENAVVDGPFLVEKQ RSENAVVDGPFLVEKQKTLPKLPKSAPSIR R S E E K Q 1 0 1 1 0 0 2 1 0 0 1 1 0 1 1 1 0 0 0 3 0 0 14 0 1502.7617 Q8NBF2 Q8NBF2 574 587 NHLRC2 NHL repeat-containing protein 2 yes yes 2 0.02129 81.239 By MS/MS 5 0 1 1 292200 292200 0 12453 1940 13263 31429 22151 22151 1 12011 0 SENEEFVEVGR FFIILEGSAAVLQRRSENEEFVEVGRLGPS LQRRSENEEFVEVGRLGPSDYFGEIALLMN R S E G R L 0 1 1 0 0 0 4 1 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1293.5837 P10644 P10644 307 317 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2 0.00015972 156.58 By MS/MS 6.5 0.5 1 1 2 9045700 9045700 0 12454 542 13264 31430;31431 22152;22153;22154 22152 3 82161 0 SEQDQAENEGEDSAVLMER KAHQRQLTPPEGSSKSEQDQAENEGEDSAV QAENEGEDSAVLMERLCKYIYAKDRTDRIR K S E E R L 2 1 1 2 0 2 5 1 0 0 1 0 1 0 0 2 0 0 0 1 0 0 19 0 2135.8913 Q99613;B5ME19 Q99613 532 550 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 1.9405E-116 357.71 By MS/MS 4 0.816 1 1 1 3 3991600 3991600 0 12455 2275 13265 31432;31433;31434 22155 22155 1 115850 0 SEQEDEVLLVSSSR DREGFKKRAACLCFRSEQEDEVLLVSSSRY RSEQEDEVLLVSSSRYPDQWIVPGGGMEPE R S E S R Y 0 1 0 1 0 1 3 0 0 0 2 0 0 0 0 4 0 0 0 2 0 0 14 0 1576.758 A0A024RBG1;Q9NZJ9 A0A024RBG1 28 41 NUDT4 Diphosphoinositol polyphosphate phosphohydrolase 2 yes no 2 0.00088302 143.31 By MS/MS 9 0 1 1 236630 236630 0 12456 0 13266 31435 22156 22156 1 135800 0 SEQEFQEQLESAR KAVRGGGGKGMRIVRSEQEFQEQLESARRE VRSEQEFQEQLESARREAKKSFNDDAMLIE R S E A R R 1 1 0 0 0 3 4 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 13 0 1579.7114 Q96RQ3 Q96RQ3 220 232 MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 2 4.0287E-25 234.24 By MS/MS 5 0 1 1 1322600 1322600 0 12457 2249 13267 31436 22157 22157 1 54364 0 SEQFINLR HLKRDFFLANASRARSEQFINLREVSTRFR ANASRARSEQFINLREVSTRFRLPPGEYVV R S E L R E 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 8 0 1005.5243 P07384 P07384 474 481 CAPN1 Calpain-1 catalytic subunit yes yes 2 0.014016 114.5 By MS/MS 5 0 1 1 542680 542680 0 12458 489 13268 31437 22158 22158 1 22306 0 SEQHGSSSGSSSSYGQHGSGSR SSYEQHGSRSGQSSRSEQHGSSSGSSSSYG SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS R S E S R Q 0 1 0 0 0 2 1 5 2 0 0 0 0 0 0 10 0 0 1 0 0 0 22 0 2151.8802 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 970 991 HRNR Hornerin yes no 3;4 0.00015471 94.271 By matching By MS/MS 4.5 1.58 1 2 3 1 1 2 6 672290 142590 529700 + 12459 64 13269 31438;31439;31440;31441;31442;31443;31444;31445 22159;22160;22161;22162 22159 4 4927.7 1203800 SEQPSLVIQK QLTPKLTSSVLKCIRSEQPSLVIQKAAIQA LKCIRSEQPSLVIQKAAIQALRKMELSDEV R S E Q K A 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1127.6186 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 513 522 yes yes 2 0.00067392 137.98 By MS/MS 2.67 1.7 1 1 1 3 2852400 2852400 0 + 12460 31 13270 31446;31447;31448 22163;22164;22165 22164 3 124110 0 SEQSSMLELLR TETFQKILDMKGLKRSEQSSMLELLRQRLP GLKRSEQSSMLELLRQRLPAPPSGAESSGS R S E L R Q 0 1 0 0 0 1 2 0 0 0 3 0 1 0 0 3 0 0 0 0 0 0 11 0 1291.6442 Q5VIR6 Q5VIR6 781 791 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.012368 96.229 By MS/MS 4 0 1 1 580120 580120 0 12461 1645 13271 31449 22166 22166 1 15837 0 SEREEVSSWR RDLRDDRDRRGPPLRSEREEVSSWRRADDR GPPLRSEREEVSSWRRADDRKDDRVEERDP R S E W R R 0 2 0 0 0 0 3 0 0 0 0 0 0 0 0 3 0 1 0 1 0 0 10 1 1263.5844 Q14152 Q14152 1302 1311 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 0.01022 126.31 By MS/MS 3 0 2 2 2777500 2777500 0 12462 1409 13272 31450;31451 22167;22168 22167 2 72506 0 SESPKEPEQLRK ______________________________ MSKSESPKEPEQLRKLFIGGLSFETTDESL K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 P09651 P09651 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 3 0.012076 125.72 By MS/MS 8 0 1 1 1290000 1290000 0 12463 519 13273 31452 22169 22169 1 85104 0 SESSDFEVVPK IPSGPLRQREESETRSESSDFEVVPKRRRQ SETRSESSDFEVVPKRRRQRGSETDTDSEI R S E P K R 0 0 0 1 0 0 2 0 0 0 0 1 0 1 1 3 0 0 0 2 0 0 11 0 1222.5717 Q9Y520 Q9Y520 1246 1256 PRRC2C Protein PRRC2C yes yes 2 0.00095683 134.23 By MS/MS 1.5 0.5 1 1 2 212540 212540 0 12464 2963 13274 31453;31454 22170 22170 1 10432 0 SESTAAAEHK AFNWRHGVFVGSAMRSESTAAAEHKGKIIM GSAMRSESTAAAEHKGKIIMHDPFAMRPFF R S E H K G 3 0 0 0 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 10 0 1029.4727 Q16822 Q16822 480 489 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.00046223 168.26 By MS/MS 6 0 1 1 0 0 0 12465 1550 13275 31455 22171 22171 1 0 0 SESVPPVTDWAWYK SEHINEGETAMLVCKSESVPPVTDWAWYKI KSESVPPVTDWAWYKITDSEDKALMNGSES K S E Y K I 1 0 0 1 0 0 1 0 0 0 0 1 0 0 2 2 1 2 1 2 0 0 14 0 1663.7882 P35613 P35613 244 257 BSG Basigin yes yes 2 0.00022001 134.98 By MS/MS 7 0.816 1 1 1 3 2677300 2677300 0 12466 797 13276 31456;31457;31458 22172 22172 1 34638 0 SETDKETSLVK KTLLHLGSSAPGKEKSETDKETSLVKQTLA GKEKSETDKETSLVKQTLAKLQQQEQREEA K S E V K Q 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 2 2 0 0 1 0 0 11 1 1235.6245 Q5SW79 Q5SW79 732 742 CEP170 Centrosomal protein of 170 kDa yes yes 2;3 0.017212 115.23 By MS/MS 2 0 2 2 553640 553640 0 12467 1621 13277 31459;31460 22173;22174 22174 2 27519 0 SETDTSLIR PIDLFMIEIMEMKHKSETDTSLIRGLVLDH MEMKHKSETDTSLIRGLVLDHGARHPDMKK K S E I R G 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 2 2 0 0 0 0 0 9 0 1020.5088 P40227 P40227 200 208 CCT6A T-complex protein 1 subunit zeta yes yes 2 1.0469E-05 176.44 By MS/MS By matching 6.33 0.471 2 1 2 1 58023000 57915000 107890 12468 828 13278 31461;31462;31463 22175;22176 22176 2 500420 330880 SETELKDTYAR NGDVTSTILQTIMEKSETELKDTYARWLPL IMEKSETELKDTYARWLPLGLGLNHLGKGE K S E A R W 1 1 0 1 0 0 2 0 0 0 1 1 0 0 0 1 2 0 1 0 0 0 11 1 1311.6307 Q13200 Q13200 546 556 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2;3 1.7594E-06 191.4 By MS/MS By matching 4.86 0.833 3 2 2 6 1 7947400 7929300 18142 12469 1347 13279 31464;31465;31466;31467;31468;31469;31470 22177;22178 22178 2 204750 37910 SEVATLTAAGK GLCGAIHSSIAKQMKSEVATLTAAGKEVML KQMKSEVATLTAAGKEVMLVGIGDKIRGIL K S E G K E 3 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 11 0 1046.5608 P36542 P36542 116 126 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 7.1924E-05 166.07 By MS/MS 8.5 0.5 1 1 2 50946000 50946000 0 12470 805 13280 31471;31472 22179;22180 22179 2 5901400 0 SEVLQESIR ISRLMQVGEEFCGSKSEVLQESIRKQSVNY EFCGSKSEVLQESIRKQSVNYFKNYHRTRL K S E I R K 0 1 0 0 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1059.556 Q96JG6 Q96JG6 434 442 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 0.0036294 118.71 By MS/MS 4 0 1 1 883290 883290 0 12471 2208 13281 31473 22181 22181 1 24113 0 SEVPLVDVTK NNNLLLADQKSGQIKSEVPLVDVTKVSMSS SGQIKSEVPLVDVTKVSMSSQNDGFFAVHL K S E T K V 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 3 0 0 10 0 1085.5968 O43795 O43795 1027 1036 MYO1B Unconventional myosin-Ib yes yes 2 0.021504 83.883 By MS/MS 3.5 0.5 1 1 2 2234800 2234800 0 12472 223 13282 31474;31475 22182 22182 1 60677 0 SEVSSDEDIQFR SDMDSILASLKLPPKSEVSSDEDIQFRLVT PPKSEVSSDEDIQFRLVTRFVNEAVMCLQE K S E F R L 0 1 0 2 0 1 2 0 0 1 0 0 0 1 0 3 0 0 0 1 0 0 12 0 1410.6263 P40939 P40939 665 676 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 3.0318E-11 208.15 By MS/MS By MS/MS 6.8 1.6 2 1 1 1 4 1 15578000 15519000 58374 12473 835 13283 31476;31477;31478;31479;31480 22183;22184;22185 22184 3 885600 172730 SEVTELRR NKEVASNSELVQSSRSEVTELRRVLQGLEI ELVQSSRSEVTELRRVLQGLEIELQSQLSM R S E R R V 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 8 1 988.53016 CON__P08779;P08779 CON__P08779 331 338 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.029812 127.12 By MS/MS 6 0.816 1 1 1 3 701310 0 701310 + 12474 47 13284 31481;31482;31483 22186 22186 1 0 2327800 SEYDRGVNTFSPEGR ______________________________ SEYDRGVNTFSPEGRLFQVEYAIEAIKLGS R S E G R L 0 2 1 1 0 0 2 2 0 0 0 0 0 1 1 2 1 0 1 1 0 0 15 1 1712.7754 P28066 P28066 6 20 PSMA5 Proteasome subunit alpha type-5 yes yes 3 0.021814 67.646 By MS/MS 8 0 1 1 1214800 1214800 0 12475 712 13285 31484 22187 22187 1 80140 0 SFAAVIQALDGEMR SSLKTCYKYLNQTSRSFAAVIQALDGEMRN RSFAAVIQALDGEMRNAVCIFYLVLRALDT R S F M R N 3 1 0 1 0 1 1 1 0 1 1 0 1 1 0 1 0 0 0 1 0 0 14 0 1506.7501 P37268 P37268 53 66 FDFT1 Squalene synthase yes yes 2 1.8298E-59 299.42 By MS/MS 6.67 0.471 1 2 3 1632200 1632200 0 12476 814 13286 31485;31486;31487 22188;22189;22190 22188 561 3 27677 0 SFAGAVSPQEEEEFRR IRVLGIQVDTDGSGRSFAGAVSPQEEEEFR FAGAVSPQEEEEFRRLAALPNVYEVISKSI R S F R R L 2 2 0 0 0 1 4 1 0 0 0 0 0 2 1 2 0 0 0 1 0 0 16 1 1837.8595 P33992 P33992 309 324 MCM5 DNA replication licensing factor MCM5 yes yes 3 0.0086844 84.566 By MS/MS 3.8 1.72 1 1 1 1 1 5 9162300 9162300 0 12477 774 13287 31488;31489;31490;31491;31492 22191;22192;22193 22193 3 284400 0 SFAQVLELSAEASK ELKDVTAKKDLELRRSFAQVLELSAEASKE RSFAQVLELSAEASKEAALANQEVWEETQG R S F S K E 3 0 0 0 0 1 2 0 0 0 2 1 0 1 0 3 0 0 0 1 0 0 14 0 1478.7617 Q9BT25 Q9BT25 311 324 HAUS8 HAUS augmin-like complex subunit 8 yes yes 2 8.6409E-06 134.04 By MS/MS 6 0 1 1 599850 599850 0 12478 2346 13288 31493 22194 22194 0 4677.7 0 SFDAVLEALSR QGDTTAAARHFRVAKSFDAVLEALSRGEPV RVAKSFDAVLEALSRGEPVDLSCLPPPPDQ K S F S R G 2 1 0 1 0 0 1 0 0 0 2 0 0 1 0 2 0 0 0 1 0 0 11 0 1206.6245 Q6P1N0 Q6P1N0 292 302 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 4.637E-05 169.93 By MS/MS 4 0 1 1 170900 170900 0 12479 1702 13289 31494 22195 22195 1 4665.4 0 SFDFEIETK EISFVNFARGTTTTRSFDFEIETKQGTQYT GTTTTRSFDFEIETKQGTQYTFSSIEREEY R S F T K Q 0 0 0 1 0 0 2 0 0 1 0 1 0 2 0 1 1 0 0 0 0 0 9 0 1114.5183 Q08945 Q08945 388 396 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.00023565 161.79 By MS/MS 5.5 0.5 1 1 2 1871500 1871500 0 12480 1291 13290 31495;31496 22196 22196 1 45011 0 SFDKNLYR VIGEPFLNVNCEHIKSFDKNLYRQLISYPQ VNCEHIKSFDKNLYRQLISYPQEVIPTFDM K S F Y R Q 0 1 1 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 8 1 1041.5243 P33991 P33991 217 224 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.01053 107.66 By MS/MS 4.5 0.5 1 1 2 1647100 1647100 0 12481 773 13291 31497;31498 22197 22197 1 48306 0 SFDLLILK AGLLQYVANQLKAGKSFDLLILKEVVQKMA NQLKAGKSFDLLILKEVVQKMAGIEITEEM K S F L K E 0 0 0 1 0 0 0 0 0 1 3 1 0 1 0 1 0 0 0 0 0 0 8 0 947.56917 Q8NI27 Q8NI27 673 680 THOC2 THO complex subunit 2 yes yes 2 0.0059024 138.83 By MS/MS 3 0 1 1 0 0 0 12482 1976 13292 31499 22198 22198 1 0 0 SFDLLVK HQVPTENVQVHFTERSFDLLVKNLNGKSYS VQVHFTERSFDLLVKNLNGKSYSMIVNNLL R S F V K N 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 7 0 820.46945 Q9HB71 Q9HB71 112 118 CACYBP Calcyclin-binding protein yes yes 2 0.015644 138.37 By MS/MS 8.5 0.5 1 1 2 6090500 6090500 0 12483 2549 13293 31500;31501 22199 22199 1 498980 0 SFDQADR QSNSIQIQWFWRALRSFDQADRAKFLQFVT QWFWRALRSFDQADRAKFLQFVTGTSKVPL R S F D R A 1 1 0 2 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 7 0 837.3617 Q7Z6Z7 Q7Z6Z7 4287 4293 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.030662 114.5 By MS/MS 1.5 0.5 1 1 2 235670 235670 0 12484 1803 13294 31502;31503 22200 22200 1 11576 0 SFDVNKPGCEVDDLKGGVAGGSILK PPRDFTSEPRLIVIRSFDVNKPGCEVDDLK VDDLKGGVAGGSILKGVLKVGQEIEVRPGI R S F L K G 1 0 1 3 1 0 1 5 0 1 2 3 0 1 1 2 0 0 0 3 0 0 25 2 2561.2796 P41091;Q2VIR3 P41091 261 285 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 3 2.9604E-06 100.88 By MS/MS 6 0 1 1 6124800 6124800 0 12485 836 13295 31504 22201 22201 1 47762 0 SFEAPIK VFWVFGTNVMVTVAKSFEAPIKLVFPQDLL NVMVTVAKSFEAPIKLVFPQDLLEKGLEAN K S F I K L 1 0 0 0 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 7 0 790.4225 Q8TCT9 Q8TCT9 235 241 HM13 Minor histocompatibility antigen H13 yes yes 2 0.043839 105.39 By MS/MS 2.5 1.12 1 1 1 1 4 872940 872940 0 12486 1997 13296 31505;31506;31507;31508 22202 22202 1 33581 0 SFEEAFQK GSCMKSVGEVMGIGRSFEEAFQKALRMVDE EVMGIGRSFEEAFQKALRMVDENCVGFDHT R S F Q K A 1 0 0 0 0 1 2 0 0 0 0 1 0 2 0 1 0 0 0 0 0 0 8 0 984.45526 P27708 P27708 771 778 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0045391 138.83 By MS/MS 2.5 1.12 1 1 1 1 4 3585100 3585100 0 12487 709 13297 31509;31510;31511;31512 22203;22204;22205 22203 3 163260 0 SFENIQNWMK GAMGIILVYDITDEKSFENIQNWMKSIKEN ITDEKSFENIQNWMKSIKENASAGVERLLL K S F M K S 0 0 2 0 0 1 1 0 0 1 0 1 1 1 0 1 0 1 0 0 0 0 10 0 1295.5969 P51153 P51153 95 104 RAB13 Ras-related protein Rab-13 yes yes 2 0.00013481 156.83 By MS/MS 9 0 1 1 288960 288960 0 12488 962 13298 31513 22206 22206 727 1 165840 0 SFENISK GAMGIMLVYDITNGKSFENISKWLRNIDEH VYDITNGKSFENISKWLRNIDEHANEDVER K S F S K W 0 0 1 0 0 0 1 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 7 0 823.40758 P61026 P61026 96 102 RAB10 Ras-related protein Rab-10 yes yes 2 0.021324 122.74 By MS/MS 9 0 1 1 660620 660620 0 12489 1085 13299 31514 22207 22207 1 379140 0 SFEWLSQMR DVTRSLIKSKIDNAKSFEWLSQMRFYFDPK KIDNAKSFEWLSQMRFYFDPKQTDVLQQLS K S F M R F 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 2 0 1 0 0 0 0 9 0 1182.5492 Q14204 Q14204 1835 1843 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 7.1629E-06 176.44 By MS/MS 1.5 0.5 1 1 2 802080 802080 0 12490 1421 13300 31515;31516 22208 22208 1115 1 39227 0 SFFGFESTVEK EDWTCFEQSASLDIKSFFGFESTVEKIAMK LDIKSFFGFESTVEKIAMKQYTSNIKKGKE K S F E K I 0 0 0 0 0 0 2 1 0 0 0 1 0 3 0 2 1 0 0 1 0 0 11 0 1276.5976 Q92503 Q92503 136 146 SEC14L1 SEC14-like protein 1 yes yes 2 0.0039129 112.3 By MS/MS 5 0 1 1 160430 160430 0 12491 2052 13301 31517 22209 22209 1 6594.1 0 SFFGPLELVEK KHGLKVKKSFIGQNKSFFGPLELVEKLCPE GQNKSFFGPLELVEKLCPEASDIATSVRNL K S F E K L 0 0 0 0 0 0 2 1 0 0 2 1 0 2 1 1 0 0 0 1 0 0 11 0 1264.6703 Q96T51 Q96T51 172 182 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 2 0.042701 78.655 By MS/MS 5.5 0.5 1 1 2 539360 539360 0 12492 2259 13302 31518;31519 22210 22210 1 17012 0 SFFSEIISSISDVK RHSKLFEEPEDPSNRSFFSEIISSISDVKF RSFFSEIISSISDVKFSHSGRYMMTRDYLS R S F V K F 0 0 0 1 0 0 1 0 0 3 0 1 0 2 0 5 0 0 0 1 0 0 14 0 1557.7926 P63151;Q00005;Q66LE6 P63151 279 292 PPP2R2A;PPP2R2B;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 2 0.00013118 144.1 By MS/MS 6 0 1 1 53417 53417 0 12493 1170 13303 31520 22211;22212 22211 2 416.55 0 SFFTSQQL LSCPLCVNPVCRETKSFFTSQQL_______ PVCRETKSFFTSQQL_______________ K S F Q L - 0 0 0 0 0 2 0 0 0 0 1 0 0 2 0 2 1 0 0 0 0 0 8 0 956.46035 P22830 P22830 416 423 FECH Ferrochelatase, mitochondrial yes yes 2 0.00095199 173.59 By MS/MS 7 0 1 1 1129800 1129800 0 12494 663 13304 31521 22213 22213 1 20190 0 SFGASGGYIGGK LDPEDVDVMMGTFTKSFGASGGYIGGKKEL FTKSFGASGGYIGGKKELIDYLRTHSHSAV K S F G K K 1 0 0 0 0 0 0 5 0 1 0 1 0 1 0 2 0 0 1 0 0 0 12 0 1099.5298 O15270 O15270 380 391 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.0001112 156.83 By MS/MS 6.5 0.5 1 1 2 6713500 6713500 0 12495 166 13305 31522;31523 22214 22214 1 56630 0 SFGGGTGSGFTSLLMER LAEQCGGLQGFLIFRSFGGGTGSGFTSLLM GGGTGSGFTSLLMERLTGEYSRKTKLEFSV R S F E R L 0 1 0 0 0 0 1 5 0 0 2 0 1 2 0 3 2 0 0 0 0 0 17 0 1702.7985 A6NHL2 A6NHL2 147 163 TUBAL3 Tubulin alpha chain-like 3 yes yes 2 0.00012003 132.47 By MS/MS 6 0 1 1 2778900 2778900 0 12496 22 13306 31524 22215 22215 7 1 21670 0 SFGSTCQLSEK TFDSQTKENMTLQPKSFGSTCQLSEKFIKA LQPKSFGSTCQLSEKFIKAAIGCGIVESIL K S F E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 3 1 0 0 0 0 0 11 0 1242.5551 P11388 P11388 387 397 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0043326 110.53 By MS/MS 4 0.816 1 1 1 3 1507100 1507100 0 12497 553 13307 31525;31526;31527 22216 22216 1 42580 0 SFITTDVNPYYDSFVR IQDLKRMGLKVDWRRSFITTDVNPYYDSFV FITTDVNPYYDSFVRWQFLTLRERNKIKFG R S F V R W 0 1 1 2 0 0 0 0 0 1 0 0 0 2 1 2 2 0 2 2 0 0 16 0 1922.905 Q9P2J5 Q9P2J5 204 219 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 5.6278E-15 208.82 By MS/MS 3.5 0.5 1 1 2 300250 300250 0 12498 2738 13308 31528;31529 22217 22217 1 7910.4 0 SFLALDWDPDLK RHIRFDDRQLRLDERSFLALDWDPDLKKRY DERSFLALDWDPDLKKRYFDENAAEDFEKH R S F L K K 1 0 0 3 0 0 0 0 0 0 3 1 0 1 1 1 0 1 0 0 0 0 12 0 1418.7082 Q9Y4E8 Q9Y4E8 747 758 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.0065245 100.88 By MS/MS 4 0 1 1 49342 49342 0 12499 2953 13309 31530 22218 22218 1 1347 0 SFLDDPIWR CCGLSMFEVILTRIRSFLDDPIWRGPLPSN ILTRIRSFLDDPIWRGPLPSNGVMHVDECV R S F W R G 0 1 0 2 0 0 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 0 9 0 1147.5662 Q7L576 Q7L576 1102 1110 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 0.0027607 121.62 By MS/MS 3 0 1 1 162870 162870 0 12500 1765 13310 31531 22219 22219 1 4251.8 0 SFLEDIRK KLKGPQKFQFDGDKKSFLEDIRKALYASKI QFDGDKKSFLEDIRKALYASKIISYAQGFM K S F R K A 0 1 0 1 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 8 1 1006.5447 P52209 P52209 318 325 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.031582 125.31 By MS/MS 7 0.816 1 1 1 3 14854000 14854000 0 12501 981 13311 31532;31533;31534 22220 22220 1 208850 0 SFLESIDDALAEK DVRRVLLQAFDVVERSFLESIDDALAEKAS ERSFLESIDDALAEKASLQSQLPEGVPQHQ R S F E K A 2 0 0 2 0 0 2 0 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1436.7035 Q15750 Q15750 116 128 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 3.4723E-25 236.69 By MS/MS 6 0 1 1 3428400 3428400 0 12502 1516 13312 31535 22221 22221 1 26734 0 SFLLDLLNATGK NITQKVVWVEESDKRSFLLDLLNATGKDSL DKRSFLLDLLNATGKDSLTLVFVETKKGAD R S F G K D 1 0 1 1 0 0 0 1 0 0 4 1 0 1 0 1 1 0 0 0 0 0 12 0 1290.7184 O00571 O00571 429 440 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 3.0318E-11 208.15 By MS/MS 6 0 1 1 221710 221710 0 12503 105 13313 31536 22222 22222 1 1728.9 0 SFLLIHESCK KEEKKKNSVDPDFLKSFLLIHESCKAYGAT PDFLKSFLLIHESCKAYGATPSRYMTFLHV K S F C K A 0 0 0 0 1 0 1 0 1 1 2 1 0 1 0 2 0 0 0 0 0 0 10 0 1232.6223 Q8NCM8 Q8NCM8 2854 2863 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0037291 111.61 By MS/MS 1 0 1 1 151070 151070 0 12504 1954 13314 31537 22223 22223 1 7381 0 SFLLKDSETSQR GLEVKSKTAKLQDFKSFLLKDSETSQRLAN DFKSFLLKDSETSQRLANLRQRVEQFARAF K S F Q R L 0 1 0 1 0 1 1 0 0 0 2 1 0 1 0 3 1 0 0 0 0 0 12 1 1409.7151 P34897 P34897 470 481 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.033153 108.7 By MS/MS 6 0 1 1 7599400 7599400 0 12505 777 13315 31538 22224 22224 1 59261 0 SFLSQGQVLK PLEEATLSELKTVLKSFLSQGQVLKLEAKT KTVLKSFLSQGQVLKLEAKTDPSILGGMIV K S F L K L 0 0 0 0 0 2 0 1 0 0 2 1 0 1 0 2 0 0 0 1 0 0 10 0 1105.6132 P48047 P48047 163 172 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 3.2784E-16 229.55 By MS/MS 9.5 0.5 1 1 2 23532000 23532000 0 12506 900 13316 31539;31540 22225;22226 22225 2 13622000 0 SFPGFQAFCETQGDR SGGLPQFGDEYDFYRSFPGFQAFCETQGDR SFPGFQAFCETQGDRLLQCMSRVMQYHGCR R S F D R L 1 1 0 1 1 2 1 2 0 0 0 0 0 3 1 1 1 0 0 0 0 0 15 0 1745.7468 Q01780 Q01780 65 79 EXOSC10 Exosome component 10 yes yes 2 3.8517E-07 164.22 By MS/MS 4.5 0.5 1 1 2 502590 502590 0 12507 1244 13317 31541;31542 22227 22227 1 15136 0 SFQMQYNLR KTEALRLQYRYLDLRSFQMQYNLRLRSQMV RYLDLRSFQMQYNLRLRSQMVMKMREYLCN R S F L R L 0 1 1 0 0 2 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 0 9 0 1185.5601 Q6PI48 Q6PI48 180 188 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.045266 78.264 By MS/MS 5 0 1 1 1866000 1866000 0 12508 1715 13318 31543 22228 22228 1 76699 0 SFQNQIAAIQR IAWDKGEKRNLEVLRSFQNQIAAIQRDAVW EVLRSFQNQIAAIQRDAVWWLHTVVPSISK R S F Q R D 2 1 1 0 0 3 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 11 0 1274.6731 Q8N201 Q8N201 577 587 INTS1 Integrator complex subunit 1 yes yes 2 0.0019436 140.16 By MS/MS 2 0 1 1 197440 197440 0 12509 1903 13319 31544 22229 22229 1 9813.9 0 SFQQSSLSR ______________________________ ______________________________ K S F S R D 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 0 9 0 1038.5094 P43243 P43243 4 12 MATR3 Matrin-3 yes yes 2 0.0073765 110.53 By MS/MS 3 0.816 1 1 1 3 722340 722340 0 12510 861 13320 31545;31546;31547 22230 22230 1 21640 0 SFSKEVEER RGDRLDRARTPATKRSFSKEVEERSRERPS TPATKRSFSKEVEERSRERPSQPEGLRKAA R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 Q04637 Q04637 1185 1193 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 6.0388E-07 195.57 By MS/MS By matching 2.5 1.26 3 4 2 2 1 11 1 16320000 16286000 34528 12511 1264 13321 31548;31549;31550;31551;31552;31553;31554;31555;31556;31557;31558;31559 22231;22232;22233;22234;22235;22236 22232 6 779740 34528 SFSPLQPGQAPTGR LQGSRHRAEVASALRSFSPLQPGQAPTGRA RSFSPLQPGQAPTGRAHSTMTGSGVDARTA R S F G R A 1 1 0 0 0 2 0 2 0 0 1 0 0 1 3 2 1 0 0 0 0 0 14 0 1441.7314 Q7Z3C6 Q7Z3C6 654 667 ATG9A Autophagy-related protein 9A yes yes 2 0.0066665 105.2 By MS/MS 1.5 0.5 1 1 2 440670 440670 0 12512 1782 13322 31560;31561 22237 22237 1 21611 0 SFSTASAITPSVSR MSRQSSVSFRSGGSRSFSTASAITPSVSRT RSFSTASAITPSVSRTSFTSVSRSGGGGGG R S F S R T 2 1 0 0 0 0 0 0 0 1 0 0 0 1 1 5 2 0 0 1 0 0 14 0 1409.7151 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 16 29 KRT5 Keratin, type II cytoskeletal 5 no no 2 6.1727E-06 171.67 By MS/MS By MS/MS 6.08 2.92 1 1 1 1 2 1 1 1 2 2 3 10 5848500 3350000 2498500 + 12513 50;61 13323 31562;31563;31564;31565;31566;31567;31568;31569;31570;31571;31572;31573;31574 22238;22239;22240;22241;22242;22243;22244;22245;22246;22247 22247 10 631050 10609000 SFTASCPVSAFVPK QDECKKKGLPWTLAKSFTASCPVSAFVPKE KSFTASCPVSAFVPKEKIPDPHKLKLWLKV K S F P K E 2 0 0 0 1 0 0 0 0 0 0 1 0 2 2 3 1 0 0 2 0 0 14 0 1496.7334 Q6P587 Q6P587 124 137 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 2 1.0127E-12 211.64 By MS/MS 9 0 1 1 389820 389820 0 12514 1710 13324 31575 22248 22248 1 223720 0 SFTDLYIQIIR KVALLDFGATREYDRSFTDLYIQIIRAAAD EYDRSFTDLYIQIIRAAADRDRETVRAKSI R S F I R A 0 1 0 1 0 1 0 0 0 3 1 0 0 1 0 1 1 0 1 0 0 0 11 0 1367.7449 Q8NI60 Q8NI60 517 527 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 1.4134E-16 229.48 By MS/MS 6 0 1 1 484210 484210 0 12515 1978 13325 31576 22249 22249 1 3775.9 0 SFTPVFLGSALK ISDLKLAIRRATLKRSFTPVFLGSALKNKG LKRSFTPVFLGSALKNKGVQPLLDAVLEYL R S F L K N 1 0 0 0 0 0 0 1 0 0 2 1 0 2 1 2 1 0 0 1 0 0 12 0 1265.702 Q96RP9 Q96RP9 291 302 GFM1 Elongation factor G, mitochondrial yes yes 2 2.3218E-05 171.85 By MS/MS 6.5 1.12 1 1 1 1 4 12121000 12121000 0 12516 2247 13326 31577;31578;31579;31580 22250;22251;22252 22251 3 255130 0 SFTVDIR AKKQLLHLAEEKQTKSFTVDIRAKPEYHKF LAEEKQTKSFTVDIRAKPEYHKFLIGKGGG K S F I R A 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 7 0 836.43922 Q00341 Q00341 727 733 HDLBP Vigilin yes yes 2 0.019469 127.84 By MS/MS 3 0.816 1 1 1 3 2573900 2573900 0 12517 1231 13327 31581;31582;31583 22253 22253 1 68617 0 SFVAYEELIK ______________________________ ______________________________ M S F I K E 1 0 0 0 0 0 2 0 0 1 1 1 0 1 0 1 0 0 1 1 0 0 10 0 1197.6281 Q96FX7 Q96FX7 2 11 TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes yes 2 0.0024909 102.07 By MS/MS 8 0 1 1 129250 129250 0 12518 2174 13328 31584 22254 22254 1 8526.9 0 SFVEFILEPLYK TRKFTKKAPTSSSQRSFVEFILEPLYKILA SQRSFVEFILEPLYKILAQVVGDVDTSLPR R S F Y K I 0 0 0 0 0 0 2 0 0 1 2 1 0 2 1 1 0 0 1 1 0 0 12 0 1483.7963 Q15029 Q15029 368 379 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.019081 86.898 By MS/MS 6 0 1 1 111310 111310 0 12519 1466 13329 31585 22255 22255 1 868.02 0 SFVELSGAER RGDGGKMAAAGALERSFVELSGAERERPRH GALERSFVELSGAERERPRHFREFTVCSIG R S F E R E 1 1 0 0 0 0 2 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 10 0 1093.5404 Q12769 Q12769 44 53 NUP160 Nuclear pore complex protein Nup160 yes yes 2 0.0035184 112.3 By MS/MS 1 0 1 1 144130 144130 0 12520 1304 13330 31586 22256 22256 1 7042 0 SFYGSTLFLCR SLFSRVSLRLVGLKKSFYGSTLFLCRRPTP GLKKSFYGSTLFLCRRPTPQDSPIFLPVDD K S F C R R 0 1 0 0 1 0 0 1 0 0 2 0 0 2 0 2 1 0 1 0 0 0 11 0 1349.6438 P49327 P49327 1394 1404 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.1456E-16 224.86 By MS/MS 2.4 1.02 1 2 1 1 5 503320 503320 0 12521 915 13331 31587;31588;31589;31590;31591 22257;22258;22259;22260 22259 4 24933 0 SFYPEEVSSMVLTK AGRPKVQVEYKGETKSFYPEEVSSMVLTKM KSFYPEEVSSMVLTKMKEIAEAYLGKTVTN K S F T K M 0 0 0 0 0 0 2 0 0 0 1 1 1 1 1 3 1 0 1 2 0 0 14 0 1615.7804 P11142 P11142 113 126 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 3.4746E-05 154.36 By MS/MS 5.86 1.12 4 1 1 1 7 13438000 13438000 0 12522 546 13332;13333 31592;31593;31594;31595;31596;31597;31598 22261;22262;22263;22264;22265 22261 341 5 530460 0 SGAALSKK EVKAEPVEVVAPRGKSGAALSKKSKGQVKE VVAPRGKSGAALSKKSKGQVKEEGINKSEK K S G K K S 2 0 0 0 0 0 0 1 0 0 1 2 0 0 0 2 0 0 0 0 0 0 8 1 760.4443 P09874 P09874 499 506 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.012119 148.99 By MS/MS By matching 4 0 2 1 1 1282900 1270900 12070 12523 521 13334 31599;31600 22266 22266 1 34693 25221 SGAAWTCQQLR EFFDDPKNWGQEKVKSGAAWTCQQLRNKSN EKVKSGAAWTCQQLRNKSNEDLHKLWYVLL K S G L R N 2 1 0 0 1 2 0 1 0 0 1 0 0 0 0 1 1 1 0 0 0 0 11 0 1276.5983 Q9HD33 Q9HD33 81 91 MRPL47 39S ribosomal protein L47, mitochondrial yes yes 2 7.3566E-22 233.46 By MS/MS 9 0 1 1 1384500 1384500 0 12524 2567 13335 31601 22267;22268 22268 2 794590 0 SGAGVPAVILR SVRNQVEDLLATLEKSGAGVPAVILRRPNQ TLEKSGAGVPAVILRRPNQSQPLPPSSLQR K S G L R R 2 1 0 0 0 0 0 2 0 1 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1038.6186 Q92542 Q92542 404 414 NCSTN Nicastrin yes yes 2 0.035918 80.455 By MS/MS 4 0.816 1 1 1 3 2104600 2104600 0 12525 2056 13336 31602;31603;31604 22269 22269 1 61193 0 SGALDVLQMKEEDVLK ______________________________ GALDVLQMKEEDVLKFLAAGTHLGGTNLDF M S G L K F 1 0 0 2 0 1 2 1 0 0 3 2 1 0 0 1 0 0 0 2 0 0 16 1 1773.9183 P08865 P08865 2 17 RPSA 40S ribosomal protein SA yes yes 2 1.9904E-20 221.86 By MS/MS 7 0 2 2 1563800 1563800 0 12526 509 13337;13338 31605;31606 22270;22271;22272 22272 307 3 27945 0 SGALLACGIVNSGVR TQIDKYLYSSEDYIKSGALLACGIVNSGVR SGALLACGIVNSGVRNECDPALALLSDYVL K S G V R N 2 1 1 0 1 0 0 3 0 1 2 0 0 0 0 2 0 0 0 2 0 0 15 0 1472.7769 Q13200 Q13200 442 456 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 5.9521E-77 312.69 By MS/MS 4 0.816 1 1 1 3 5018400 5018400 0 12527 1347 13339 31607;31608;31609 22273 22273 1 143190 0 SGANINR EINIDHKFHRHLIGKSGANINRIKDQYKVS FHRHLIGKSGANINRIKDQYKVSVRIPPDS K S G N R I 1 1 2 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 7 0 730.3722 Q00341 Q00341 454 460 HDLBP Vigilin yes yes 2 0.045549 104.21 By MS/MS 2.5 0.5 1 1 2 2460500 2460500 0 12528 1231 13340 31610;31611 22274 22274 1 109150 0 SGAPVLSLLSVR LDVRSPRAPVQVIHRSGAPVLSLLSVRDGF IHRSGAPVLSLLSVRDGFIASQGDGSCFIV R S G V R D 1 1 0 0 0 0 0 1 0 0 3 0 0 0 1 3 0 0 0 2 0 0 12 0 1197.7081 Q9BRP4 Q9BRP4 321 332 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 2 0.0065245 100.88 By MS/MS 7.5 0.5 1 1 2 426850 426850 0 12529 2326 13341 31612;31613 22275 22275 1 11331 0 SGATAGAAGGR ______________________________ VAPRSGATAGAAGGRGKGAYQDRDKPAQIR R S G G R G 4 1 0 0 0 0 0 4 0 0 0 0 0 0 0 1 1 0 0 0 0 0 11 0 874.42569 P50991 P50991 9 19 CCT4 T-complex protein 1 subunit delta yes yes 2 1.2594E-07 193.38 By MS/MS By MS/MS 7 2.14 1 2 1 1 1 1 6 1 54436000 54369000 67175 12530 956 13342 31614;31615;31616;31617;31618;31619;31620 22276;22277;22278;22279;22280;22281;22282 22280 7 985220 206020 SGAVTFSSQGR NSFSKSTNSSDVSAKSGAVTFSSQGRVNPF VSAKSGAVTFSSQGRVNPFKVSASSKEPAM K S G G R V 1 1 0 0 0 1 0 2 0 0 0 0 0 1 0 3 1 0 0 1 0 0 11 0 1095.5309 O75717 O75717 900 910 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.00056405 162.36 By MS/MS 3.5 0.5 1 1 2 1116000 1116000 0 12531 325 13343 31621;31622 22283 22283 1 29515 0 SGAYLIPLLER SGRDILARAKNGTGKSGAYLIPLLERLDLK GTGKSGAYLIPLLERLDLKKDNIQAMVIVP K S G E R L 1 1 0 0 0 0 1 1 0 1 3 0 0 0 1 1 0 0 1 0 0 0 11 0 1230.6972 P26196 P26196 147 157 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 2 0.003805 112.75 By MS/MS 6.5 0.5 1 1 2 1933600 1933600 0 12532 692 13344 31623;31624 22284 22284 1 15652 0 SGCIVNNLAEFTVDPK YNPDLVRAYGPGLEKSGCIVNNLAEFTVDP GCIVNNLAEFTVDPKDAGKAPLKIFAQDGE K S G P K D 1 0 2 1 1 0 1 1 0 1 1 1 0 1 1 1 1 0 0 2 0 0 16 0 1762.856 O75369 O75369 658 673 FLNB Filamin-B yes yes 2 4.1188E-06 150.26 By MS/MS 3 0.816 1 1 1 3 251070 251070 0 12533 300 13345 31625;31626;31627 22285 22285 1 9100.4 0 SGDLYVLAADK CYMPESKYAVVKCSKSGDLYVLAADKVASV KCSKSGDLYVLAADKVASVASTLETTFETI K S G D K V 2 0 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1150.587 Q9NSE4 Q9NSE4 326 336 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.00093157 134.57 By MS/MS 3.5 0.5 1 1 2 4601500 4601500 0 12534 2624 13346 31628;31629 22286 22286 1 125400 0 SGDSEVYQLGDVSQK NPVTIFSLATNEMWRSGDSEVYQLGDVSQK SGDSEVYQLGDVSQKTTWHRISVFRPGLRD R S G Q K T 0 0 0 2 0 2 1 2 0 0 1 1 0 0 0 3 0 0 1 2 0 0 15 0 1610.7424 Q04837 Q04837 67 81 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2;3 2.8388E-29 249.98 By MS/MS By MS/MS 10 0 6 3 3 13044000 9872400 3171300 12535 1267 13347 31630;31631;31632;31633;31634;31635 22287;22288;22289;22290;22291 22290 5 10493000 81341000 SGDVIEYLLK RGLQNHPMVLPICSRSGDVIEYLLKNQWFV PICSRSGDVIEYLLKNQWFVRCQEMGARAA R S G L K N 0 0 0 1 0 0 1 1 0 1 2 1 0 0 0 1 0 0 1 1 0 0 10 0 1135.6125 Q5ST30 Q5ST30 468 477 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.00095555 124.92 By MS/MS By matching 3.5 0.5 1 1 1 1 2111500 1978700 132880 12536 1619 13348 31636;31637 22292 22292 1 54015 190440 SGEDEQQEQTIAEDLVVTK ______________________________ EQQEQTIAEDLVVTKYKMGGDIANRVLRSL M S G T K Y 1 0 0 2 0 3 4 1 0 1 1 1 0 0 0 1 2 0 0 2 0 0 19 0 2117.9964 Q9UQ80 Q9UQ80 2 20 PA2G4 Proliferation-associated protein 2G4 yes yes 2 1.2494E-26 227.91 By MS/MS 6.5 0.5 1 1 2 823940 823940 0 12537 2859 13349 31638;31639 22293 22293 1 12314 0 SGEEDFESLASQFSDCSSAK EEALELINGYIQKIKSGEEDFESLASQFSD FESLASQFSDCSSAKARGDLGAFSRGQMQK K S G A K A 2 0 0 2 1 1 3 1 0 0 1 1 0 2 0 6 0 0 0 0 0 0 20 0 2179.8852 Q13526 Q13526 98 117 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 2 4.0668E-31 217.39 By MS/MS 10 0 1 1 338040 338040 0 12538 1378 13350 31640 22294 22294 1 359300 0 SGEGEVSGLMR YSSAEPHVSGVKRSRSGEGEVSGLMRKVPR KRSRSGEGEVSGLMRKVPRVSLERLDLDLT R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 Q13263 Q13263 473 483 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0012237 137.46 By MS/MS By MS/MS 4 0 3 2 1 2395900 2339900 55966 12539 1351 13351;13352 31641;31642;31643 22295;22296;22297 22297 1062 3 63876 116940 SGELAQEYDKR KNPKERTALFEEISRSGELAQEYDKRKKEM EISRSGELAQEYDKRKKEMVKAEEDTQFNY R S G K R K 1 1 0 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 11 1 1294.6153 Q14683 Q14683 161 171 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 3.5156E-10 204.34 By MS/MS 3 0.816 1 1 1 3 1495900 1495900 0 12540 1440 13353 31644;31645;31646 22298 22298 1 39765 0 SGELLAK SAQGQMTQLCELINKSGELLAKNLSHLDTV QLCELINKSGELLAKNLSHLDTVLGALDVQ K S G A K N 1 0 0 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 7 0 716.40685 Q9UNS2 Q9UNS2 31 37 COPS3 COP9 signalosome complex subunit 3 yes yes 2 0.013964 143.02 By MS/MS 6 0.816 1 1 1 3 2491800 2491800 0 12541 2847 13354 31647;31648;31649 22299 22299 1 42853 0 SGELPPNINIK ______________________________ ______________________________ M S G I K E 0 0 2 0 0 0 1 1 0 2 1 1 0 0 2 1 0 0 0 0 0 0 11 0 1180.6452 Q9H9B4 Q9H9B4 2 12 SFXN1 Sideroflexin-1 yes yes 2 0.021276 74.92 By MS/MS 8.5 0.5 1 1 2 813240 813240 0 12542 2533 13355 31650;31651 22300 22300 1 115140 0 SGELPPNINIKEPR ______________________________ MSGELPPNINIKEPRWDQSTFIGRANHFFT M S G P R W 0 1 2 0 0 0 2 1 0 2 1 1 0 0 3 1 0 0 0 0 0 0 14 1 1562.8417 Q9H9B4 Q9H9B4 2 15 SFXN1 Sideroflexin-1 yes yes 2 0.00051717 138.89 By MS/MS 8.5 1.12 1 1 1 1 4 62653000 62653000 0 12543 2533 13356 31652;31653;31654;31655 22301;22302;22303;22304;22305;22306;22307;22308 22301 8 4687300 0 SGELQGGPDDNLIEGGGTK MSAYLREQRRELYSRSGELQGGPDDNLIEG QGGPDDNLIEGGGTKFVCKPGARNITVIFH R S G T K F 0 0 1 2 0 1 2 6 0 1 2 1 0 0 1 1 1 0 0 0 0 0 19 0 1842.8595 Q96A65 Q96A65 468 486 EXOC4 Exocyst complex component 4 yes yes 2 1.149E-25 265.64 By MS/MS 4 0 1 1 2149900 2149900 0 12544 2118 13357 31656 22309 22309 1 58690 0 SGEQCSVEPDLISK EVVSSTVRAVIATLRSGEQCSVEPDLISKV RSGEQCSVEPDLISKVLQGLIEVRSPHLEE R S G S K V 0 0 0 1 1 1 2 1 0 1 1 1 0 0 1 3 0 0 0 1 0 0 14 0 1547.7137 Q8N201 Q8N201 1530 1543 INTS1 Integrator complex subunit 1 yes yes 2 0.0009168 125.03 By MS/MS 2 0 1 1 201530 201530 0 12545 1903 13358 31657 22310 22310 1 10017 0 SGERPVTAGEEDEQVPDSIDAR GGGLLENANPLIYQRSGERPVTAGEEDEQV AGEEDEQVPDSIDAREIFDLIRSINDPEHP R S G A R E 2 2 0 3 0 1 4 2 0 1 0 0 0 0 2 2 1 0 0 2 0 0 22 1 2356.0779 Q9Y3D0 Q9Y3D0 23 44 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 3 0.0017599 76.826 By MS/MS 10 0 1 1 2579300 2579300 0 12546 2929 13359 31658 22311 22311 1 2741500 0 SGESNTHQDIEEKDR GKGRRAAAAADLANRSGESNTHQDIEEKDR SGESNTHQDIEEKDRLLRHVEARDLIEFGM R S G D R L 0 1 1 2 0 1 3 1 1 1 0 1 0 0 0 2 1 0 0 0 0 0 15 1 1743.766 O76031 O76031 463 477 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2;3 6.7138E-15 217.12 By MS/MS By matching 5.4 0.49 3 2 4 1 10165000 10142000 23175 12547 344 13360 31659;31660;31661;31662;31663 22312;22313;22314 22313 3 93603 68574 SGETGYVPPAYLR LERSSAHWWLAARARSGETGYVPPAYLRRL ARSGETGYVPPAYLRRLQGLEQDVLQAIDR R S G L R R 1 1 0 0 0 0 1 2 0 0 1 0 0 0 2 1 1 0 2 1 0 0 13 0 1408.6987 Q9NZQ3 Q9NZQ3 42 54 NCKIPSD NCK-interacting protein with SH3 domain yes yes 2 0.00046397 137.98 By MS/MS 4.5 0.5 1 1 2 925470 925470 0 12548 2715 13361 31664;31665 22315 22315 1 36478 0 SGEVLVNVK IAGHESGELNQYSAKSGEVLVNVKEHSRQI NQYSAKSGEVLVNVKEHSRQINDIQLSRDM K S G V K E 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 3 0 0 9 0 943.53385 Q13347 Q13347 177 185 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 0.0014785 153.08 By MS/MS By matching 7.33 0.471 2 1 2 1 21433000 21387000 45438 12549 1358 13362 31666;31667;31668 22316;22317 22317 1 854470 186530 SGEVLVNVKEHSR IAGHESGELNQYSAKSGEVLVNVKEHSRQI AKSGEVLVNVKEHSRQINDIQLSRDMTMFV K S G S R Q 0 1 1 0 0 0 2 1 1 0 1 1 0 0 0 2 0 0 0 3 0 0 13 1 1452.7685 Q13347 Q13347 177 189 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2;3 0.0055814 134.38 By MS/MS 7.5 0.957 1 2 2 1 6 26304000 26304000 0 12550 1358 13363 31669;31670;31671;31672;31673;31674 22318;22319;22320 22320 3 1598400 0 SGFGEISSPVIR ______________________________ MDRSGFGEISSPVIREAEVTRTARKQSAQK R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 P57740 P57740 4 15 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.00038666 143.89 By MS/MS 4 0 1 1 1347800 1347800 0 12551 1057 13364 31675 22321 22321 1 36794 0 SGFLEELLGEK ______________________________ ______________________________ M S G E K L 0 0 0 0 0 0 3 2 0 0 3 1 0 1 0 1 0 0 0 0 0 0 11 0 1220.6289 Q6DKJ4 Q6DKJ4 2 12 NXN Nucleoredoxin yes yes 2 0.0012782 114.4 By MS/MS 6 0 1 1 167200 167200 0 12552 1678 13365 31676 22322 22322 1 1303.9 0 SGFNPNQGFFK DGGGIFREFLNELLKSGFNPNQGFFKTTNE ELLKSGFNPNQGFFKTTNEGLLYPNPAAQM K S G F K T 0 0 2 0 0 1 0 2 0 0 0 1 0 3 1 1 0 0 0 0 0 0 11 0 1241.5829 Q15386 Q15386 783 793 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.011881 96.668 By MS/MS 4 0 1 1 1224700 1224700 0 12553 1494 13366 31677 22323 22323 1 33432 0 SGFSSISVSR RGFSANSARLPGVSRSGFSSISVSRSRGSG PGVSRSGFSSISVSRSRGSGGLGGACGGAG R S G S R S 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 5 0 0 0 1 0 0 10 0 1025.5142 CON__P48668;P48668;P04259 CON__P48668 31 40 KRT6C;KRT6B Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.00069522 136.99 By MS/MS 4.33 1.97 1 1 1 1 1 1 6 964390 0 964390 + 12554 53;449 13367 31678;31679;31680;31681;31682;31683 22324;22325;22326;22327;22328;22329 22328 6 0 2111900 SGFVPNVVHSSEEVVK KRGEITIQEGWEGVKSGFVPNVVHSSEEVV GFVPNVVHSSEEVVKSERRCLC________ K S G V K S 0 0 1 0 0 0 2 1 1 0 0 1 0 1 1 3 0 0 0 5 0 0 16 0 1712.8733 Q96DA2 Q96DA2 191 206 RAB39B Ras-related protein Rab-39B yes yes 2 0.0068168 99.927 By MS/MS 9 0 1 1 325450 325450 0 12555 2148 13368 31684 22330 22330 1 186780 0 SGGGFSSGSAGIINYQR ______________________________ GGFSSGSAGIINYQRRTTSSSTRRSGGGGG R S G Q R R 1 1 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 0 17 0 1656.7856 P04264;CON__P04264 P04264 13 29 KRT1 Keratin, type II cytoskeletal 1 no no 2 2.7332E-55 282.05 By MS/MS By MS/MS 5.69 3.1 2 2 1 1 1 2 1 2 2 2 6 10 9035900 3946100 5089700 + 12556 450;45 13369 31685;31686;31687;31688;31689;31690;31691;31692;31693;31694;31695;31696;31697;31698;31699;31700 22331;22332;22333;22334;22335;22336;22337;22338;22339;22340;22341;22342;22343;22344;22345;22346 22346 16 1302000 20707000 SGGGFSSGSAGIINYQRR ______________________________ GFSSGSAGIINYQRRTTSSSTRRSGGGGGR R S G R R T 1 2 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 0 18 1 1812.8867 P04264;CON__P04264 P04264 13 30 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.014256 72.898 By MS/MS 1 0 1 1 251560 0 251560 + 12557 450;45 13370 31701 22347;22348 22348 2 0 251560 SGGGGGGGFGR ITPSVSRTSFTSVSRSGGGGGGGFGRVSLA SVSRSGGGGGGGFGRVSLAGACGVGGYGSR R S G G R V 0 1 0 0 0 0 0 8 0 0 0 0 0 1 0 1 0 0 0 0 0 0 11 0 864.38383 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 38 48 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.00031269 150.36 By MS/MS By MS/MS 5 2.75 1 2 2 1 2 1 1 1 1 1 5 8 4763600 2373500 2390200 + 12558 50;61 13371 31702;31703;31704;31705;31706;31707;31708;31709;31710;31711;31712;31713;31714 22349;22350;22351;22352;22353;22354;22355;22356 22356 8 492560 5569900 SGGGGGGGGCGGGGGVSSLR MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG GGGGCGGGGGVSSLRISSSKGSLGGGFSSG R S G L R I 0 1 0 0 1 0 0 13 0 0 1 0 0 0 0 3 0 0 0 1 0 0 20 0 1548.6699 CON__P13645;P13645 CON__P13645 16 35 KRT10 Keratin, type I cytoskeletal 10 yes no 2 2.8544E-12 162.37 By MS/MS By MS/MS 5.82 2.83 2 2 2 2 2 1 2 2 2 8 9 14350000 9120800 5229300 + 12559 49 13372 31715;31716;31717;31718;31719;31720;31721;31722;31723;31724;31725;31726;31727;31728;31729;31730;31731 22357;22358;22359;22360;22361;22362;22363;22364;22365;22366;22367;22368;22369;22370;22371 22367 15 1163000 39809000 SGGGGGGGLGSGGSIR ______________________________ GGGGGGGLGSGGSIRSSYSRFSSSGGGGGG R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 0 16 0 1231.5905 P35527;CON__P35527 P35527 14 29 KRT9 Keratin, type I cytoskeletal 9 yes no 2 8.5962E-15 205.87 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 10 9 225910000 99954000 125960000 + 12560 791 13373 31732;31733;31734;31735;31736;31737;31738;31739;31740;31741;31742;31743;31744;31745;31746;31747;31748;31749;31750 22372;22373;22374;22375;22376;22377;22378;22379;22380;22381;22382;22383;22384;22385;22386;22387;22388;22389;22390;22391;22392;22393 22393 22 26894000 324010000 SGGGGGGGLGSGGSIRSSYSR ______________________________ GGLGSGGSIRSSYSRFSSSGGGGGGGRFSS R S G S R F 0 2 0 0 0 0 0 10 0 1 1 0 0 0 0 6 0 0 1 0 0 0 21 1 1811.8511 P35527;CON__P35527 P35527 14 34 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.003995 72.676 By matching By MS/MS 1 0 2 1 1 3413200 127080 3286100 + 12561 791 13374 31751;31752 22394 22394 1 6209.1 3286100 SGGGYIVVDPILR QSGSFQYYFLQGNEKSGGGYIVVDPILRVG EKSGGGYIVVDPILRVGADNHVLPLDCVTL K S G L R V 0 1 0 1 0 0 0 3 0 2 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1344.7402 P35573 P35573 102 114 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 2 0.00028707 143.96 By MS/MS 3 0 1 1 1032700 1032700 0 12562 792 13375 31753 22395 22395 1 26959 0 SGGLGGSHALLLLR IPKKLLQKVFNDTCRSGGLGGSHALLLLRS RSGGLGGSHALLLLRSCGSLLPELKLEERT R S G L R S 1 1 0 0 0 0 0 4 1 0 5 0 0 0 0 2 0 0 0 0 0 0 14 0 1349.7779 P42704 P42704 115 128 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 6.9236E-05 152.64 By MS/MS 4 1.07 3 2 1 1 7 13067000 13067000 0 12563 854 13376 31754;31755;31756;31757;31758;31759;31760 22396;22397;22398 22396 3 329190 0 SGGLPLVLSMLTR PLADDSSDFQFHFLKSGGLPLVLSMLTRNN LKSGGLPLVLSMLTRNNFLPNADMETRRGA K S G T R N 0 1 0 0 0 0 0 2 0 0 4 0 1 0 1 2 1 0 0 1 0 0 13 0 1342.7643 Q93008 Q93008 1120 1132 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0018956 115.57 By MS/MS 2 0 1 1 152620 152620 0 12564 2096 13377 31761 22399 22399 1378 1 7585.8 0 SGGLQTPECLSR SAPASPTHPGLMSPRSGGLQTPECLSREGS SPRSGGLQTPECLSREGSPIPHDPEFGSKL R S G S R E 0 1 0 0 1 1 1 2 0 0 2 0 0 0 1 2 1 0 0 0 0 0 12 0 1303.619 P85037 P85037 431 442 FOXK1 Forkhead box protein K1 yes yes 2 0.01395 92.611 By MS/MS 4 0 1 1 343630 343630 0 12565 1220 13378 31762 22400 22400 1 9380.7 0 SGGMERPFVLAR GLYVHMATADGLRQRSGGMERPFVLARAFF RQRSGGMERPFVLARAFFAGSQRFGAVWTG R S G A R A 1 2 0 0 0 0 1 2 0 0 1 0 1 1 1 1 0 0 0 1 0 0 12 1 1318.6816 Q14697 Q14697 591 602 GANAB Neutral alpha-glucosidase AB yes yes 3 0.00041964 133.91 By MS/MS 4 0 1 1 2701000 2701000 0 12566 1443 13379 31763 22401 22401 1135 1 73734 0 SGGMSNELNNIISR ASKLYRPGSVAYVSRSGGMSNELNNIISRT RSGGMSNELNNIISRTTDGVYEGVAIGGDR R S G S R T 0 1 3 0 0 0 1 2 0 2 1 0 1 0 0 3 0 0 0 0 0 0 14 0 1490.7147 P53396 P53396 663 676 ACLY ATP-citrate synthase yes yes 2 6.5512E-36 268.14 By MS/MS 2.5 1.12 1 1 1 1 4 8105800 8105800 0 12567 1001 13380;13381 31764;31765;31766;31767 22402;22403;22404;22405 22402 764 4 249290 0 SGGSGGCSGAGGASNCGTGSGR ______________________________ SGAGGASNCGTGSGRSGLLDKWKIDDKPVK R S G G R S 2 1 1 0 2 0 0 10 0 0 0 0 0 0 0 5 1 0 0 0 0 0 22 0 1856.7126 Q15005 Q15005 11 32 SPCS2 Signal peptidase complex subunit 2 yes yes 2 3.2009E-26 210.02 By MS/MS 9.5 0.5 1 1 2 410440 410440 0 12568 1458 13382 31768;31769 22406 22406 1 243480 0 SGGVGGSNTNWK AEGQALDGVSISDLKSGGVGGSNTNWKTLY DLKSGGVGGSNTNWKTLYEVKSENLGQGDK K S G W K T 0 0 2 0 0 0 0 4 0 0 0 1 0 0 0 2 1 1 0 1 0 0 12 0 1162.5367 P27694 P27694 432 443 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.0044463 108.9 By MS/MS 5 0 1 1 1384000 1384000 0 12569 708 13383 31770 22407 22407 1 56890 0 SGGVNQYVVQEVLSIK MYEFHLPLSPEELLKSGGVNQYVVQEVLSI GGVNQYVVQEVLSIKHLPPQLRAFQAAFRA K S G I K H 0 0 1 0 0 2 1 2 0 1 1 1 0 0 0 2 0 0 1 4 0 0 16 0 1718.9203 Q15021 Q15021 20 35 NCAPD2 Condensin complex subunit 1 yes yes 2 9.1571E-07 160.48 By MS/MS 3.5 0.5 1 1 2 277250 277250 0 12570 1464 13384 31771;31772 22408 22408 1 7310.3 0 SGIIDLK LEAEGFQVTYLPVQKSGIIDLKELEAAIQP VTYLPVQKSGIIDLKELEAAIQPDTSLVSV K S G L K E 0 0 0 1 0 0 0 1 0 2 1 1 0 0 0 1 0 0 0 0 0 0 7 0 744.43815 Q9Y697 Q9Y697 181 187 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 0.046887 103.28 By MS/MS 7 0 1 1 640100 640100 0 12571 2998 13385 31773 22409 22409 1 11439 0 SGILAAESIFNQLTSENLQSK FMNVPKIKGTHTAMKSGILAAESIFNQLTS ESIFNQLTSENLQSKTIGLHVTEYEDNLKN K S G S K T 2 0 2 0 0 2 2 1 0 2 3 1 0 1 0 4 1 0 0 0 0 0 21 0 2249.1539 Q16134 Q16134 406 426 ETFDH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes yes 2 1.1135E-05 131.61 By MS/MS 6 0 1 1 235000 235000 0 12572 1529 13386 31774 22410 22410 1 1832.6 0 SGILPILVK LLSSDRNPPIDDLIKSGILPILVKCLERDD IDDLIKSGILPILVKCLERDDNPSLQFEAA K S G V K C 0 0 0 0 0 0 0 1 0 2 2 1 0 0 1 1 0 0 0 1 0 0 9 0 938.61645 O00505 O00505 113 121 KPNA3 Importin subunit alpha-4 yes yes 2 0.016834 98.523 By MS/MS 6 0 1 1 865420 865420 0 12573 101 13387 31775 22411 22411 1 6748.6 0 SGIVEYLSLVK WVCDESVRKLSSAVRSGIVEYLSLVKGGQD SAVRSGIVEYLSLVKGGQDVKKKVHLSEKI R S G V K G 0 0 0 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 1 2 0 0 11 0 1206.686 P49642 P49642 183 193 PRIM1 DNA primase small subunit yes yes 2 0.00025587 171.33 By MS/MS 6 0 1 1 1520400 1520400 0 12574 923 13388 31776 22412 22412 1 11856 0 SGKKLEDGPK IACKFAELKEKIDRRSGKKLEDGPKFLKSG KIDRRSGKKLEDGPKFLKSGDAAIVDMVPG R S G P K F 0 0 0 1 0 0 1 2 0 0 1 3 0 0 1 1 0 0 0 0 0 0 10 2 1057.5768 Q5VTE0;P68104 Q5VTE0 383 392 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 0.0027768 141.89 By MS/MS 7.33 0.471 2 1 3 2205200 2205200 0 12575 1184 13389 31777;31778;31779 22413;22414 22414 2 40899 0 SGKYDLDFKSPDDPSR KVVIGMDVAASEFFRSGKYDLDFKSPDDPS GKYDLDFKSPDDPSRYISPDQLADLYKSFI R S G S R Y 0 1 0 4 0 0 0 1 0 0 1 2 0 1 2 3 0 0 1 0 0 0 16 2 1825.8483 P06733 P06733 254 269 ENO1 Alpha-enolase yes yes 3 0.024298 72.184 By MS/MS 6 0 1 1 6458000 6458000 0 12576 482 13390 31780 22415 22415 1 50360 0 SGLEEKSDSHDIPR GLVCFQGLLGWYMVKSGLEEKSDSHDIPRV KSGLEEKSDSHDIPRVSQYRLAAHLGSALV K S G P R V 0 1 0 2 0 0 2 1 1 1 1 1 0 0 1 3 0 0 0 0 0 0 14 1 1568.7431 Q7KZN9 Q7KZN9 204 217 COX15 Cytochrome c oxidase assembly protein COX15 homolog yes yes 3 0.01907 72.891 By MS/MS 1.5 0.5 1 1 2 211170 211170 0 12577 1758 13391 31781;31782 22416 22416 1 10358 0 SGLGELILPENEPGSSIMPGK MKIANDIRFLGSGPRSGLGELILPENEPGS ILPENEPGSSIMPGKVNPTQCEAMTMVAAQ R S G G K V 0 0 1 0 0 0 3 4 0 2 3 1 1 0 3 3 0 0 0 0 0 0 21 0 2124.0773 P07954 P07954 351 371 FH Fumarate hydratase, mitochondrial yes yes 2 2.9941E-08 141.54 By MS/MS 7 0 1 1 722830 722830 0 12578 496 13392 31783 22417 22417 296 1 12917 0 SGLLVLTTPLASLAPR ______________________________ GLLVLTTPLASLAPRLASILTSAARLVNHT R S G P R L 2 1 0 0 0 0 0 1 0 0 5 0 0 0 2 2 2 0 0 1 0 0 16 0 1607.961 Q13057 Q13057 6 21 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 2 1.8294E-14 196.24 By MS/MS 6 0 1 1 740710 740710 0 12579 1330 13393 31784 22418 22418 1 5776.1 0 SGLMLVPLEANSEK S G E K 1 0 1 0 0 0 2 1 0 0 3 1 1 0 1 2 0 0 0 1 0 0 14 0 1486.7701 REV__P83105 yes yes 2 0.010647 85.958 By MS/MS 8 0 2 2 1196100 1196100 0 + 12580 3027 13394 31785;31786 22419 22419 1743 1 78905 0 SGLQVEDLDRLNIIHVTGTK DPQTQLEAMELYLARSGLQVEDLDRLNIIH EDLDRLNIIHVTGTKGKGSTCAFTECILRS R S G T K G 0 1 1 2 0 1 1 2 1 2 3 1 0 0 0 1 2 0 0 2 0 0 20 1 2207.191 Q05932 Q05932 86 105 FPGS Folylpolyglutamate synthase, mitochondrial yes yes 3 0.0078721 65.924 By MS/MS 6 0 1 1 2018400 2018400 0 12581 1271 13395 31787 22420 22420 1 15739 0 SGLSSPIYIDLR LYDVQAFKFGDFVLKSGLSSPIYIDLRGIV VLKSGLSSPIYIDLRGIVSRPRLLSQVADI K S G L R G 0 1 0 1 0 0 0 1 0 2 2 0 0 0 1 3 0 0 1 0 0 0 12 0 1319.7085 P11172 P11172 30 41 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 0.00025744 149.96 By MS/MS 6 0 1 1 4823900 4823900 0 12582 548 13396 31788 22421 22421 1 37617 0 SGLTGYIK VAFPPLEDKLEQKTKSGLTGYIKGIFGFRS KLEQKTKSGLTGYIKGIFGFRS________ K S G I K G 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q9UHB9 Q9UHB9 613 620 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.01687 110.81 By MS/MS 5 0 1 1 2964100 2964100 0 12583 2779 13397 31789 22422 22422 1 121840 0 SGNELPLAVASTADLIR LQRYALNRITVWRSRSGNELPLAVASTADL NELPLAVASTADLIRCKLLDVTGGLGTDEL R S G I R C 3 1 1 1 0 0 1 1 0 1 3 0 0 0 1 2 1 0 0 1 0 0 17 0 1725.9261 Q9Y4W2 Q9Y4W2 80 96 LAS1L Ribosomal biogenesis protein LAS1L yes yes 2 0.00040387 123.68 By MS/MS 4.5 0.5 1 1 2 439090 439090 0 12584 2959 13398 31790;31791 22423 22423 1 13502 0 SGNGEVTFENVK APDSMFIVAFQLFDKSGNGEVTFENVKEIF FDKSGNGEVTFENVKEIFGQTIIHHHIPFN K S G V K E 0 0 2 0 0 0 2 2 0 0 0 1 0 1 0 1 1 0 0 2 0 0 12 0 1279.6044 O75746 O75746 101 112 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 1.232E-11 211.86 By MS/MS 5 0 1 1 1494500 1494500 0 12585 327 13399 31792 22424 22424 1 61429 0 SGNILLHK RQGKFKPNSVTYRTKSGNILLHKSTINREA SVTYRTKSGNILLHKSTINREATRLRSRWL K S G H K S 0 0 1 0 0 0 0 1 1 1 2 1 0 0 0 1 0 0 0 0 0 0 8 0 880.51305 Q7L2E3 Q7L2E3 1052 1059 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.0085868 123.72 By MS/MS 3.5 0.5 1 1 2 2272800 2272800 0 12586 1763 13400 31793;31794 22425;22426 22425 2 59938 0 SGNLDPAELAIVAAAQK IISGVEMQVLQEKLRSGNLDPAELAIVAAA NLDPAELAIVAAAQKKDFPHGIPECGTDAL R S G Q K K 5 0 1 1 0 1 1 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 17 0 1666.889 Q5ST30 Q5ST30 687 703 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 1.0466E-55 286.74 By MS/MS 4 0 1 1 1391600 1391600 0 12587 1619 13401 31795 22427 22427 1 37988 0 SGPASTFNDR VEWVKEMVANWDSLRSGPASTFNDRVFASE WDSLRSGPASTFNDRVFASELNAGIIKTDQ R S G D R V 1 1 1 1 0 0 0 1 0 0 0 0 0 1 1 2 1 0 0 0 0 0 10 0 1050.473 Q9P2J5 Q9P2J5 786 795 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.008668 100.25 By MS/MS 4 0.816 1 1 1 3 2892800 2892800 0 12588 2738 13402 31796;31797;31798 22428 22428 1 77448 0 SGPEEQPRDTASPVPA PNCEVVGVDWAEGLKSGPEEQPRDTASPVP GPEEQPRDTASPVPA_______________ K S G P A - 2 1 0 1 0 1 2 1 0 0 0 0 0 0 4 2 1 0 0 1 0 0 16 1 1636.7693 Q9NW81 Q9NW81 242 257 ATP5SL ATP synthase subunit s-like protein yes yes 2 8.2526E-10 191.79 By MS/MS 9 0.816 1 1 1 3 2027700 2027700 0 12589 2665 13403 31799;31800;31801 22429 22429 1 273280 0 SGPEPLQEGPGPK ATVCKDGRVRVYRPRSGPEPLQEGPGPKGG PRSGPEPLQEGPGPKGGRGARIVWVCDGRC R S G P K G 0 0 0 0 0 1 2 3 0 0 1 1 0 0 4 1 0 0 0 0 0 0 13 0 1291.6408 P57737 P57737 668 680 CORO7 Coronin-7 yes yes 2 0.00014015 152.69 By MS/MS 4 0 1 1 1764200 1764200 0 12590 1056 13404 31802 22430 22430 1 48161 0 SGPFGQIFRPDNFVFGQSGAGNNWAK AVLVDLEPGTMDSVRSGPFGQIFRPDNFVF NFVFGQSGAGNNWAKGHYTEGAELVDSVLD R S G A K G 2 1 3 1 0 2 0 5 0 1 0 1 0 4 2 2 0 1 0 1 0 0 26 1 2797.3361 P07437;P68371;Q13885;Q9BVA1;P04350 P68371 78 103 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 3 1.5696E-11 125.08 By MS/MS 6 0 1 1 4563900 4563900 0 12591 1187;490;1400;2375;451 13405 31803 22431;22432 22431 2 35590 0 SGPFGQLFR AALVDLEPGTMDSVRSGPFGQLFRPDNFIF TMDSVRSGPFGQLFRPDNFIFGQTGAGNNW R S G F R P 0 1 0 0 0 1 0 2 0 0 1 0 0 2 1 1 0 0 0 0 0 0 9 0 1007.5189 Q9BUF5 Q9BUF5 78 86 TUBB6 Tubulin beta-6 chain yes yes 2 0.00029272 158.07 By MS/MS 6 0 1 1 3399300 3399300 0 12592 2363 13406 31804 22433 22433 1 26508 0 SGPGLIGLGIK EGQQYCCRLVEMDSKSGPGLIGLGIKALQD MDSKSGPGLIGLGIKALQDKKYEDAVRNLT K S G I K A 0 0 0 0 0 0 0 4 0 2 2 1 0 0 1 1 0 0 0 0 0 0 11 0 1010.6124 Q6PGP7 Q6PGP7 271 281 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00078789 143.37 By MS/MS 3.5 0.5 1 1 2 1509800 1509800 0 12593 1714 13407 31805;31806 22434 22434 1 39519 0 SGPIFIVVPNGK KKMPSKTSLKEDEDKSGPIFIVVPNGKEQR EDKSGPIFIVVPNGKEQRMKDEKGLKVLKW K S G G K E 0 0 1 0 0 0 0 2 0 2 0 1 0 1 2 1 0 0 0 2 0 0 12 0 1226.7023 Q14008 Q14008 1157 1168 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.020012 85.862 By MS/MS 2 0 1 1 102770 102770 0 12594 1405 13408 31807 22435 22435 1 5108.2 0 SGPLGDQPFAGLLPK TEARHQRQPRGSCQRSGPLGDQPFAGLLPK SGPLGDQPFAGLLPKNLSREELVDALRAAV R S G P K N 1 0 0 1 0 1 0 3 0 0 3 1 0 1 3 1 0 0 0 0 0 0 15 0 1495.8035 Q6P087 Q6P087 54 68 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 2.9411E-07 167.2 By MS/MS 7.5 0.5 1 1 2 561700 561700 0 12595 1697 13409 31808;31809 22436;22437 22436 2 35145 0 SGPNIYELR QLLLEFSFWNEPVPRSGPNIYELRSYQLRP NEPVPRSGPNIYELRSYQLRPGTMIEWGNY R S G L R S 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 9 0 1047.5349 O75323 O75323 182 190 GBAS Protein NipSnap homolog 2 yes yes 2 6.6632E-08 209.21 By MS/MS By matching 8.33 0.471 2 1 2 1 79306000 79140000 166060 12596 296 13410 31810;31811;31812 22438;22439 22438 2 5426600 1416700 SGQGDALASGPVETGPMK DEEEDPLIYQHRMLRSGQGDALASGPVETG GDALASGPVETGPMKKLHVSTINLQKAWGA R S G M K K 2 0 0 1 0 1 1 4 0 0 1 1 1 0 2 2 1 0 0 1 0 0 18 0 1700.8039 P42345 P42345 1239 1256 MTOR Serine/threonine-protein kinase mTOR yes yes 2 7.0679E-19 206.45 By MS/MS 2 0 1 1 142000 142000 0 12597 849 13411 31813 22440 22440 1 7058.2 0 SGQPVTADDLGVTGALTVLMK DMKARLGRMVVASDKSGQPVTADDLGVTGA ADDLGVTGALTVLMKDAIKPNLMQTLEGTP K S G M K D 2 0 0 2 0 1 0 3 0 0 3 1 1 0 1 1 3 0 0 3 0 0 21 0 2072.0824 Q6UB35 Q6UB35 639 659 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2;3 2.7218E-25 210.39 By MS/MS 4 0 2 2 1397500 1397500 0 12598 1726 13412 31814;31815 22441;22442 22441 1231 2 38151 0 SGQVYSFGCNDEGALGR VQAEAGGMHTVCLSKSGQVYSFGCNDEGAL QVYSFGCNDEGALGRDTSVEGSEMVPGKVE K S G G R D 1 1 1 1 1 1 1 4 0 0 1 0 0 1 0 2 0 0 1 1 0 0 17 0 1815.7846 P18754 P18754 85 101 RCC1 Regulator of chromosome condensation yes yes 2 2.1497E-33 293.53 By MS/MS 7 0 1 1 2710700 2710700 0 12599 625 13413 31816 22443 22443 1 48440 0 SGSAAQAEGLCK ______________________________ RGRSGSAAQAEGLCKQWLQRAWQERRLLLR R S G C K Q 3 0 0 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1177.5397 Q92685 Q92685 11 22 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes yes 2 5.0342E-07 180.66 By MS/MS 1.5 0.5 1 1 2 246470 246470 0 12600 2075 13414 31817;31818 22444;22445 22444 2 12042 0 SGSDSSVGAR LVHHYITCSDKVMSRSGSDSSVGARACFGG KVMSRSGSDSSVGARACFGGLFANLIRPGD R S G A R A 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 4 0 0 0 1 0 0 10 0 921.41519 Q9NR09 Q9NR09 2881 2890 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.0044378 109.29 By MS/MS 1.5 0.5 1 1 2 139950 139950 0 12601 2596 13415 31819;31820 22446 22446 1 6864 0 SGSGTMNLGGSLTR YKLTSTVMLWLQTNKSGSGTMNLGGSLTRQ KSGSGTMNLGGSLTRQMEKDETVSDCSPHI K S G T R Q 0 1 1 0 0 0 0 4 0 0 2 0 1 0 0 3 2 0 0 0 0 0 14 0 1336.6405 P47756 P47756 182 195 CAPZB F-actin-capping protein subunit beta yes yes 2 8.7239E-05 144.57 By MS/MS 8.5 0.5 1 1 2 1303600 1303600 0 12602 895 13416 31821;31822 22447 22447 634 1 126880 0 SGSGWSSSR HGSGSGQSSSYGPYRSGSGWSSSRGPYESG SYGPYRSGSGWSSSRGPYESGSGHSSGLGH R S G S R G 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 909.39406 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 1029 1037 HRNR Hornerin yes no 2 0.0047016 116.37 By MS/MS 4.33 1.7 1 1 1 3 324040 0 324040 + 12603 64 13417 31823;31824;31825 22448;22449 22449 2 0 682220 SGSPVATFK GDDGALKIWDLRQFKSGSPVATFKQHVAPV DLRQFKSGSPVATFKQHVAPVTSVEWHPQD K S G F K Q 1 0 0 0 0 0 0 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 9 0 892.46543 Q9BQ67 Q9BQ67 342 350 GRWD1 Glutamate-rich WD repeat-containing protein 1 yes yes 2 0.02555 93.598 By MS/MS 6 0 1 1 2150700 2150700 0 12604 2307 13418 31826 22450 22450 1 16771 0 SGSSSVAAMKK ______________________________ ______________________________ M S G K K V 2 0 0 0 0 0 0 1 0 0 0 2 1 0 0 4 0 0 0 1 0 0 11 1 1051.5332 P63218 P63218 2 12 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 2 0.0066353 93.598 By MS/MS 10 0 1 1 128490 128490 0 12605 1175 13419 31827 22451 22451 913 1 136570 0 SGSWAAIYQDIR ______________________________ IDKSGSWAAIYQDIRHEASDFPCRVAKLPK K S G I R H 2 1 0 1 0 1 0 1 0 2 0 0 0 0 0 2 0 1 1 0 0 0 12 0 1365.6677 P18031 P18031 13 24 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 1.9984E-05 172.56 By MS/MS 6 0 1 1 4494900 4494900 0 12606 620 13420 31828 22452 22452 1 35051 0 SGTNLDGNDEFDEQLR ______________________________ GTNLDGNDEFDEQLRMQELYGDGKDGDTQT M S G L R M 0 1 2 3 0 1 2 2 0 0 2 0 0 1 0 1 1 0 0 0 0 0 16 0 1808.7813 O43719 O43719 2 17 HTATSF1 HIV Tat-specific factor 1 yes yes 2 2.2217E-05 167.22 By MS/MS 4 0 1 1 611660 611660 0 12607 218 13421 31829 22453 22453 1 16698 0 SGTQDIQPGPLFNNNADGVATDITSTR GTGLLSSDYRIINGKSGTQDIQPGPLFNNN NNNADGVATDITSTRSLNYKSTSSGHREIS K S G T R S 2 1 3 3 0 2 0 3 0 2 1 0 0 1 2 2 4 0 0 1 0 0 27 0 2788.3264 Q7Z2W4 Q7Z2W4 417 443 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3 0.00058779 67.848 By MS/MS 5 0.816 1 1 1 3 1684300 1684300 0 12608 1777 13422 31830;31831;31832 22454 22454 1 37378 0 SGTQSDKVTLK EIAEEYGGVMVSFPRSGTQSDKVTLKGAKD SFPRSGTQSDKVTLKGAKDCVEAAKKRIQE R S G L K G 0 0 0 1 0 1 0 1 0 0 1 2 0 0 0 2 2 0 0 1 0 0 11 1 1162.6194 Q00341 Q00341 840 850 HDLBP Vigilin yes yes 2;3 0.0014567 155.06 By MS/MS 3.33 0.471 2 1 3 3153600 3153600 0 12609 1231 13423 31833;31834;31835 22455;22456 22456 2 82615 0 SGTSEFLNK MTREELVKNLGTIAKSGTSEFLNKMTEAQE LGTIAKSGTSEFLNKMTEAQEDGQSTSELI K S G N K M 0 0 1 0 0 0 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 0 9 0 981.47673 P14625 P14625 169 177 HSP90B1 Endoplasmin yes yes 2 1.4139E-06 190.73 By MS/MS By matching 4 0 2 1 1 7620000 7563800 56202 12610 589 13424 31836;31837 22457 22457 1 206480 117440 SGTSSPEAVKK ______________________________ ______________________________ M S G K K L 1 0 0 0 0 0 1 1 0 0 0 2 0 0 1 3 1 0 0 1 0 0 11 1 1089.5666 Q7Z3U7 Q7Z3U7 2 12 MON2 Protein MON2 homolog yes yes 2 0.00035248 157.99 By MS/MS 2.5 1.12 1 1 1 1 4 1316600 1316600 0 12611 1786 13425 31838;31839;31840;31841 22458 22458 1 37176 0 SGTVDPQELQK LNGWRQHFISFDTDRSGTVDPQELQKALTT DTDRSGTVDPQELQKALTTMGFRLSPQAVN R S G Q K A 0 0 0 1 0 2 1 1 0 0 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1200.5986 P30626 P30626 117 127 SRI Sorcin yes yes 2 8.6437E-05 163.88 By MS/MS 9 0 1 1 745190 745190 0 12612 745 13426 31842 22459 22459 1 427670 0 SGTYLQGTFR FSEHLPLSKLQQGIKSGTYLQGTFRASREN QQGIKSGTYLQGTFRASRENYLEATVWIHG K S G F R A 0 1 0 0 0 1 0 2 0 0 1 0 0 1 0 1 2 0 1 0 0 0 10 0 1128.5564 Q9Y2L1 Q9Y2L1 243 252 DIS3 Exosome complex exonuclease RRP44 yes yes 2 0.00027001 153.97 By MS/MS 2.5 1.5 1 1 2 5744900 5744900 0 12613 2892 13427 31843;31844 22460;22461 22461 2 160950 0 SGVDADSSYFK WITNKMGKKRIENFKSGVDADSSYFKIFKT ENFKSGVDADSSYFKIFKTKHD________ K S G F K I 1 0 0 2 0 0 0 1 0 0 0 1 0 1 0 3 0 0 1 1 0 0 11 0 1174.5142 Q9Y394 Q9Y394 322 332 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 2 0.0015426 126.39 By MS/MS 7.5 0.5 1 1 2 1913300 1913300 0 12614 2919 13428 31845;31846 22462;22463 22462 2 94384 0 SGVGNIFIK PVRIMWSQRDPSLRKSGVGNIFIKNLDKSI DPSLRKSGVGNIFIKNLDKSIDNKALYDTF K S G I K N 0 0 1 0 0 0 0 2 0 2 0 1 0 1 0 1 0 0 0 1 0 0 9 0 933.52837 P11940;Q4VXU2;Q96DU9 P11940 96 104 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 yes no 2 1.1445E-05 182.53 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 7453400 7398300 55026 12615 560 13429 31847;31848;31849 22464;22465 22465 2 292640 162820 SGVGNVFIK PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI DPSLRKSGVGNVFIKNLDKSIDNKALYDTF K S G I K N 0 0 1 0 0 0 0 2 0 1 0 1 0 1 0 1 0 0 0 2 0 0 9 0 919.51272 Q13310 Q13310 96 104 PABPC4 Polyadenylate-binding protein 4 no no 2 0.0019131 130.75 By MS/MS 5 0 1 1 1683600 1683600 0 12616 1353 13430 31850 22466 22466 1 69201 0 SGVGTALLLK VVGAQRDAWGPGAAKSGVGTALLLKLAQMF PGAAKSGVGTALLLKLAQMFSDMVLKDGFQ K S G L K L 1 0 0 0 0 0 0 2 0 0 3 1 0 0 0 1 1 0 0 1 0 0 10 0 957.58588 P02786 P02786 419 428 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.00092394 149.57 By MS/MS 4.5 0.5 1 1 2 834310 834310 0 12617 437 13431 31851;31852 22467 22467 1 25262 0 SGVISGGASDLK QRHKTVALDGTLFQKSGVISGGASDLKAKA FQKSGVISGGASDLKAKARRWDEKAVDKLK K S G L K A 1 0 0 1 0 0 0 3 0 1 1 1 0 0 0 3 0 0 0 1 0 0 12 0 1089.5666 Q14683 Q14683 649 660 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.037487 89.561 By MS/MS 3 0 1 1 2580000 2580000 0 12618 1440 13432 31853 22468 22468 1 67350 0 SGVLDESTIATILR VLDIIKHIVAKGEHKSGVLDESTIATILRE KSGVLDESTIATILREVLEGLEYLHKNGQI K S G L R E 1 1 0 1 0 0 1 1 0 2 2 0 0 0 0 2 2 0 0 1 0 0 14 0 1473.8039 O95747 O95747 115 128 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 2 0.0011978 121.68 By MS/MS 6 0 1 1 243000 243000 0 12619 404 13433 31854 22469 22469 0 1895 0 SGVYCGPLK SGKTYHAIQKYFSAKSGVYCGPLKLLAHEI KYFSAKSGVYCGPLKLLAHEIFEKSNAAGV K S G L K L 0 0 0 0 1 0 0 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 9 0 979.4797 Q8IYB8 Q8IYB8 226 234 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.052706 87.696 By MS/MS 5 0 1 1 0 0 0 12620 1879 13434 31855 22470 22470 1 0 0 SGYLLPDTK VLDLAVVLFETATLRSGYLLPDTKAYGDRI ETATLRSGYLLPDTKAYGDRIERMLRLSLN R S G T K A 0 0 0 1 0 0 0 1 0 0 2 1 0 0 1 1 1 0 1 0 0 0 9 0 992.51786 P14625 P14625 725 733 HSP90B1 Endoplasmin yes yes 2 0.018722 107.15 By MS/MS By matching 4 0 2 1 1 6271200 6237100 34152 12621 589 13435 31856;31857 22471 22471 1 170270 71363 SHEANSNAVR EDGGLLNYLFTFLLKSHEANSNAVRFRVCL TFLLKSHEANSNAVRFRVCLLINKLLGSMP K S H V R F 2 1 2 0 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 0 10 0 1083.5057 Q9BPX3 Q9BPX3 106 115 NCAPG Condensin complex subunit 3 yes yes 2 0.00031749 152.11 By MS/MS 4 0 1 1 358740 358740 0 12622 2302 13436 31858 22472 22472 1 9793.1 0 SHGIDLDHNR SGKKKTFKDVGNLLRSHGIDLDHNRFLILQ GNLLRSHGIDLDHNRFLILQGEVEQIAMMK R S H N R F 0 1 1 2 0 0 0 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1162.5479 Q9NTJ3 Q9NTJ3 215 224 SMC4 Structural maintenance of chromosomes protein 4 yes yes 3 0.024244 83.883 By MS/MS 3 0 1 1 1192100 1192100 0 12623 2630 13437 31859 22473 22473 1 31119 0 SHGLFGLNENQLR LSHDIHTPVNMQVLKSHGLFGLNENQLRIL LKSHGLFGLNENQLRILLLQNDPCLLPEVC K S H L R I 0 1 2 0 0 1 1 2 1 0 3 0 0 1 0 1 0 0 0 0 0 0 13 0 1483.7532 Q96H79 Q96H79 142 154 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.00352 100.02 By MS/MS 7.5 0.5 1 1 2 1274400 1274400 0 12624 2188 13438 31860;31861 22474 22474 1 73489 0 SHGVLGLYR PRYRGIGDCVRQTVRSHGVLGLYRGLSSLL VRQTVRSHGVLGLYRGLSSLLYGSIPKAAV R S H Y R G 0 1 0 0 0 0 0 2 1 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 1000.5454 P53007 P53007 77 85 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.0074791 110.31 By MS/MS 8 0 1 1 9052200 9052200 0 12625 996 13439 31862 22475 22475 1 597170 0 SHHAASTTTAPTPAAR LLVKLCVGSPVRQRRSHHAASTTTAPTPAA HHAASTTTAPTPAARSTASALTKLLTKGLS R S H A R S 5 1 0 0 0 0 0 0 2 0 0 0 0 0 2 2 4 0 0 0 0 0 16 0 1575.7754 Q7Z6Z7 Q7Z6Z7 1084 1099 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.0078463 83.869 By MS/MS 1.5 0.5 1 1 2 365510 365510 0 12626 1803 13440 31863;31864 22476;22477 22476 2 17990 0 SHHANSPTAGAAK PPPDPGEQIFNLPKKSHHANSPTAGAAKSS KKSHHANSPTAGAAKSSPAAKPGSTPSRPS K S H A K S 4 0 1 0 0 0 0 1 2 0 0 1 0 0 1 2 1 0 0 0 0 0 13 0 1247.6007 Q15555 Q15555 195 207 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 2 0.01064 94.465 By MS/MS 7 0 1 1 191550 191550 0 12627 1508 13441 31865 22478 22478 1 3423.1 0 SHIMAAK DQDRKSRLMGLEALKSHIMAAKAVANTMRT LMGLEALKSHIMAAKAVANTMRTSLGPNGL K S H A K A 2 0 0 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 0 7 0 756.39524 P48643 P48643 36 42 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.020892 114.59 By MS/MS By matching 6.33 0.471 2 1 2 1 6619600 6612200 7400.5 12628 909 13442 31866;31867;31868 22479 22479 650 1 52048 22697 SHPEVIGVFGESVK SSPSKIYGRALEKCRSHPEVIGVFGESVKG RSHPEVIGVFGESVKGYGEVTRRGRRQHVR R S H V K G 0 0 0 0 0 0 2 2 1 1 0 1 0 1 1 2 0 0 0 3 0 0 14 0 1483.7671 Q9BVV7 Q9BVV7 151 164 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 0.00039047 134.99 By MS/MS 9 0 1 1 1073300 1073300 0 12629 2386 13443 31869 22480 22480 1 616000 0 SHPLDPIDTVDFER IHTEPQLSAALEYVRSHPLDPIDTVDFERE RSHPLDPIDTVDFERECGVGVIVTPEQIEE R S H E R E 0 1 0 3 0 0 1 0 1 1 1 0 0 1 2 1 1 0 0 1 0 0 14 0 1639.7842 P47897 P47897 96 109 QARS Glutamine--tRNA ligase yes yes 3 0.00083853 118.73 By MS/MS 4.5 0.5 1 1 2 949470 949470 0 12630 896 13444 31870;31871 22481 22481 1 37355 0 SHPSPQAKPSNPSNPR ______________________________ HPSPQAKPSNPSNPRVFFDVDIGGERVGRI M S H P R V 1 1 2 0 0 1 0 0 1 0 0 1 0 0 5 4 0 0 0 0 0 0 16 1 1699.839 Q08752 Q08752 2 17 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 3 0.0054063 77.324 By MS/MS 7 0 1 1 1979500 1979500 0 12631 1290 13445 31872 22482 22482 1 35373 0 SHQGLDR GLEERVAAAVDLIIKSHQGLDRQELSFAAR AAVDLIIKSHQGLDRQELSFAARSFYYKLR K S H D R Q 0 1 0 1 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 811.39366 P49327 P49327 2407 2413 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.034785 111.65 By MS/MS 2.5 1.12 1 1 1 1 4 4111100 4111100 0 12632 915 13446 31873;31874;31875;31876 22483;22484 22484 2 178070 0 SHQGLDRQELSFAAR GLEERVAAAVDLIIKSHQGLDRQELSFAAR SHQGLDRQELSFAARSFYYKLRAAEQYTPK K S H A R S 2 2 0 1 0 2 1 1 1 0 2 0 0 1 0 2 0 0 0 0 0 0 15 1 1713.8547 P49327 P49327 2407 2421 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.04798 64.407 By MS/MS 4 0.816 1 1 1 3 4154600 4154600 0 12633 915 13447 31877;31878;31879 22485 22485 1 117480 0 SHTILLVQPTK ______________________________ ______________________________ M S H T K R 0 0 0 0 0 1 0 0 1 1 2 1 0 0 1 1 2 0 0 1 0 0 11 0 1235.7238 P84090 P84090 2 12 ERH Enhancer of rudimentary homolog yes yes 2 2.4345E-05 167.12 By MS/MS By MS/MS 10 0 2 1 1 4562300 2275800 2286500 12634 1216 13448 31880;31881 22486;22487 22486 2 2418900 58648000 SHTILLVQPTKRPEGR ______________________________ HTILLVQPTKRPEGRTYADYESVNECMEGV M S H G R T 0 2 0 0 0 1 1 1 1 1 2 1 0 0 2 1 2 0 0 1 0 0 16 2 1831.0428 P84090 P84090 2 17 ERH Enhancer of rudimentary homolog yes yes 3;4 0.001818 105.66 By MS/MS By MS/MS 10 0 4 2 2 1944600 1543900 400700 12635 1216 13449 31882;31883;31884;31885 22488;22489;22490;22491 22488 4 1641000 10278000 SHVDLFPK YQEKWDKLLLTSTEKSHVDLFPKDSIIYLT LLTSTEKSHVDLFPKDSIIYLTADSPNVMT K S H P K D 0 0 0 1 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 1 0 0 8 0 941.49707 Q7L0Y3 Q7L0Y3 277 284 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.018685 108.46 By MS/MS 7 0 1 1 3537500 3537500 0 12636 1761 13450 31886 22492 22492 1 63215 0 SHVLQQTQR EMMKAAYRKELEKNRSHVLQQTQRLDTSQK ELEKNRSHVLQQTQRLDTSQKRILELESHL R S H Q R L 0 1 0 0 0 3 0 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1095.5785 Q92574 Q92574 893 901 TSC1 Hamartin yes yes 2 0.0065774 146.79 By MS/MS 3 0 1 1 0 0 0 12637 2061 13451 31887 22493 22493 1 0 0 SHVVREDLNPR SDPYVKLKLAGRSFRSHVVREDLNPRWNEV RSFRSHVVREDLNPRWNEVFEVIVTSVPGQ R S H P R W 0 2 1 1 0 0 1 0 1 0 1 0 0 0 1 1 0 0 0 2 0 0 11 1 1320.6898 Q9BSJ8 Q9BSJ8 689 699 ESYT1 Extended synaptotagmin-1 yes yes 3 0.046846 63.32 By MS/MS By matching 3.75 0.829 2 1 1 3 1 2076600 2065000 11574 12638 2339 13452 31888;31889;31890;31891 22494;22495 22494 2 59623 16588 SIAAATSALVK DESLNFEEQILEAAKSIAAATSALVKAASA EAAKSIAAATSALVKAASAAQRELVAQGKV K S I V K A 4 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1030.6023 Q9Y490;Q9Y4G6 Q9Y490 2351 2361 TLN1;TLN2 Talin-1;Talin-2 yes no 2 0.00054699 140.83 By MS/MS 3 0.816 1 1 1 3 1010700 1010700 0 12639 2947 13453 31892;31893;31894 22496 22496 1 40675 0 SIAKEGFEK EEAGDGTTTATVLARSIAKEGFEKISKGAN ATVLARSIAKEGFEKISKGANPVEIRRGVM R S I E K I 1 0 0 0 0 0 2 1 0 1 0 2 0 1 0 1 0 0 0 0 0 0 9 1 1007.5288 P10809 P10809 122 130 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0082887 139.38 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 144000000 143670000 328320 12640 544 13454 31895;31896;31897;31898;31899;31900 22497 22497 1 1699100 1006900 SIALTQAR DVRLLQEIVDQCMNRSIALTQARYLEKEEK VDQCMNRSIALTQARYLEKEEKCLPPPSIR R S I A R Y 2 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 0 858.49232 O15269 O15269 423 430 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 0.0093028 121.05 By MS/MS 6 0 1 1 14466000 14466000 0 12641 165 13455 31901 22498 22498 1 112800 0 SIATLAITTLLK ACNLDLENLVTDSNRSIATLAITTLLKTGS SNRSIATLAITTLLKTGSESSIDRLMKQIS R S I L K T 2 0 0 0 0 0 0 0 0 2 3 1 0 0 0 1 3 0 0 0 0 0 12 0 1243.7751 Q9Y678;Q9UBF2 Q9Y678 339 350 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 1.1167E-08 195.27 By MS/MS 5 1 1 1 2 461390 461390 0 12642 2996;2748 13456 31902;31903 22499;22500 22500 2 6032 0 SIDGMQYPIVIK FEVKGIEMAKESPSRSIDGMQYPIVIKNTK PSRSIDGMQYPIVIKNTKGEEIRCQYVVTC R S I I K N 0 0 0 1 0 1 0 1 0 3 0 1 1 0 1 1 0 0 1 1 0 0 12 0 1362.7217 Q9H9P8 Q9H9P8 232 243 L2HGDH L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 2 1.3558E-16 217.66 By MS/MS 7.5 0.5 1 1 2 3128800 3128800 0 12643 2536 13457 31904;31905 22501 22501 1534 1 66719 0 SIDGSIVLPLAR ILQPPSEKGRQCEWRSIDGSIVLPLARGSP EWRSIDGSIVLPLARGSPKALALEYALCLT R S I A R G 1 1 0 1 0 0 0 1 0 2 2 0 0 0 1 2 0 0 0 1 0 0 12 0 1239.7187 Q9HD20 Q9HD20 786 797 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0026541 140.16 By MS/MS 2.5 1.12 1 1 1 1 4 942290 942290 0 12644 2566 13458 31906;31907;31908;31909 22502;22503;22504;22505 22504 3 33175 0 SIDISATIPK FSTDSPRLLASPSSRSIDISATIPKFTNTQ SPSSRSIDISATIPKFTNTQITEHYSTCIK R S I P K F 1 0 0 1 0 0 0 0 0 3 0 1 0 0 1 2 1 0 0 0 0 0 10 0 1043.5863 Q15003 Q15003 92 101 NCAPH Condensin complex subunit 2 yes yes 2 0.0037291 111.61 By MS/MS 4 0 1 1 773780 773780 0 12645 1457 13459 31910 22506 22506 1 21123 0 SIDLKDKYK WGSPKVTKDGVTVAKSIDLKDKYKNIGAKL GVTVAKSIDLKDKYKNIGAKLVQDVANNTN K S I Y K N 0 0 0 2 0 0 0 0 0 1 1 3 0 0 0 1 0 0 1 0 0 0 9 2 1108.6128 P10809 P10809 83 91 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.017334 136.27 By MS/MS By MS/MS 6.71 1.99 1 1 3 4 2 2 2 2 14 3 240140000 239770000 369940 12646 544 13460 31911;31912;31913;31914;31915;31916;31917;31918;31919;31920;31921;31922;31923;31924;31925;31926;31927 22507;22508;22509;22510;22511;22512 22512 6 3024200 1131600 SIDLQEPLQK YGDGNAVPRILKFLKSIDLQEPLQKKFCFP LKFLKSIDLQEPLQKKFCFPPVKENISQDI K S I Q K K 0 0 0 1 0 2 1 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1169.6292 Q9Y223 Q9Y223 376 385 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.00028855 153.24 By MS/MS 5.5 0.5 1 1 2 7238200 7238200 0 12647 2862 13461 31928;31929 22513 22513 1 82722 0 SIDSNPYDTDK CIGTMTIEIDFLQKKSIDSNPYDTDKMAAE LQKKSIDSNPYDTDKMAAEFIQQFNNQAFS K S I D K M 0 0 1 3 0 0 0 0 0 1 0 1 0 0 1 2 1 0 1 0 0 0 11 0 1253.5412 P46459 P46459 106 116 NSF Vesicle-fusing ATPase yes yes 2 0.0022355 119.34 By MS/MS 5 0 1 1 2367900 2367900 0 12648 881 13462 31930 22514 22514 1 97331 0 SIEEIVR GIGPKRAVDLIQKHKSIEEIVRRLDPNKYP VDLIQKHKSIEEIVRRLDPNKYPVPENWLH K S I V R R 0 1 0 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 7 0 844.46543 P39748 P39748 255 261 FEN1 Flap endonuclease 1 yes yes 2 0.020731 124.37 By MS/MS 8 0.816 1 1 1 3 6054500 6054500 0 12649 826 13463 31931;31932;31933 22515 22515 1 187750 0 SIEGTADDEEEGVSPDTAIR IDSEAISALVKLMNKSIEGTADDEEEGVSP ADDEEEGVSPDTAIRSGLELLKVLSFTHPT K S I I R S 2 1 0 3 0 0 4 2 0 2 0 0 0 0 1 2 2 0 0 1 0 0 20 0 2089.9288 Q29RF7 Q29RF7 638 657 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 2.3358E-13 175.6 By MS/MS 3.5 0.5 1 1 2 1415500 1415500 0 12650 1556 13464 31934;31935 22516 22516 1 37288 0 SIEPYLK KDLVPDLSNFYAQYKSIEPYLKKKDESQEG SNFYAQYKSIEPYLKKKDESQEGKQQYLQS K S I L K K 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 0 0 0 7 0 848.46437 P21912 P21912 152 158 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.020871 123.99 By MS/MS 8.33 0.471 2 1 3 7831200 7831200 0 12651 651 13465 31936;31937;31938 22517 22517 1 574370 0 SIEQDAVNTFTK SPASPLKELSGKLMKSIEQDAVNTFTKYIS LMKSIEQDAVNTFTKYISPDAAKPIPITEA K S I T K Y 1 0 1 1 0 1 1 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 12 0 1351.662 O43572 O43572 293 304 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 2 1.4402E-05 163.45 By MS/MS 5 0 1 1 0 0 0 12652 207 13466 31939 22518 22518 1 0 0 SIEVQLLR LLPNMLSPDPRELQKSIEVQLLRSSVCLAT DPRELQKSIEVQLLRSSVCLATALNPIEQD K S I L R S 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 8 0 956.56548 Q96Q15 Q96Q15 1288 1295 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.0090006 122.18 By MS/MS 1 0 1 1 209920 209920 0 12653 2241 13467 31940 22519 22519 1 10256 0 SIEVYSAYNNVK VLLAQCVVYFARAPKSIEVYSAYNNVKACL APKSIEVYSAYNNVKACLRNHQGPLPPVPL K S I V K A 1 0 2 0 0 0 1 0 0 1 0 1 0 0 0 2 0 0 2 2 0 0 12 0 1385.6827 Q96S55 Q96S55 590 601 WRNIP1 ATPase WRNIP1 yes yes 2 0.0021137 120.63 By MS/MS 5 0 1 1 1715300 1715300 0 12654 2253 13468 31941 22520 22520 1 70506 0 SIFAQEIAAR RSRDTQGKSATSGKRSIFAQEIAARRIAEA TSGKRSIFAQEIAARRIAEAKGPSVGEVVP R S I A R R 3 1 0 0 0 1 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 10 0 1104.5928 Q9BWH6 Q9BWH6 150 159 RPAP1 RNA polymerase II-associated protein 1 yes yes 2 7.181E-05 168.83 By MS/MS 3 0 1 1 796440 796440 0 12655 2394 13469 31942 22521 22521 1 20791 0 SIFDYALR RKLVLLSVLKEPVSRSIFDYALRSKDITSL LKEPVSRSIFDYALRSKDITSLFRHLHMRQ R S I L R S 1 1 0 1 0 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 8 0 983.50763 Q99570 Q99570 727 734 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 2 0.04858 91.9 By MS/MS 3 0 1 1 238700 238700 0 12656 2273 13470 31943 22522 22522 1 6231.3 0 SIFLFLDR DRCWQNHCRQMIMIRSIFLFLDRTYVLQNS RQMIMIRSIFLFLDRTYVLQNSMLPSIWDM R S I D R T 0 1 0 1 0 0 0 0 0 1 2 0 0 2 0 1 0 0 0 0 0 0 8 0 1009.5597 Q13620;Q13619 Q13620 305 312 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.0075566 127.56 By MS/MS 5 0.816 1 1 1 3 629730 629730 0 12657 1390 13471 31944;31945;31946 22523;22524;22525 22523 3 18863 0 SIFSLDTPEQYQEAFQK GTEGPFVERVTAVWKSIFSLDTPEQYQEAF FSLDTPEQYQEAFQKLQNIKYPSATNNTPA K S I Q K L 1 0 0 1 0 3 2 0 0 1 1 1 0 2 1 2 1 0 1 0 0 0 17 0 2029.9633 Q8TEQ6 Q8TEQ6 1166 1182 GEMIN5 Gem-associated protein 5 yes yes 2 2.4479E-18 199.13 By MS/MS 3.5 0.5 1 1 2 407420 407420 0 12658 2003 13472 31947;31948 22526 22526 1 10726 0 SIFTPTNQIR ______________________________ ______________________________ M S I I R L 0 1 1 0 0 1 0 0 0 2 0 0 0 1 1 1 2 0 0 0 0 0 10 0 1175.6299 Q9Y3A5 Q9Y3A5 2 11 SBDS Ribosome maturation protein SBDS yes yes 2 0.027298 78.098 By MS/MS 8 0 1 1 7314700 7314700 0 12659 2922 13473 31949 22527 22527 1 482550 0 SIGEYDVLR PPDVLRWVELAKLYRSIGEYDVLRGIFTSE LAKLYRSIGEYDVLRGIFTSEIGTKQITQS R S I L R G 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1050.5346 P78527 P78527 2932 2940 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00091101 144.12 By MS/MS 2.5 1.12 1 1 1 1 4 12595000 12595000 0 12660 1197 13474 31950;31951;31952;31953 22528;22529;22530 22528 3 547690 0 SIGTDNVCR HGIFERLKQFLECSRSIGTDNVCRDRLEKT FLECSRSIGTDNVCRDRLEKTIILFTKVLL R S I C R D 0 1 1 1 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 0 1020.4658 Q9UI26 Q9UI26 255 263 IPO11 Importin-11 yes yes 2 0.0024319 125.16 By MS/MS 4 0 1 1 1094100 1094100 0 12661 2787 13475 31954 22531 22531 1 29868 0 SIGTGGIQDLK MILQRYYDSKNHQKRSIGTGGIQDLKERIR HQKRSIGTGGIQDLKERIRQRTNLPLGPSI R S I L K E 0 0 0 1 0 1 0 3 0 2 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1087.5873 O00471 O00471 378 388 EXOC5 Exocyst complex component 5 yes yes 2 0.00078789 136.49 By MS/MS 5 0 1 1 979390 979390 0 12662 98 13476 31955 22532 22532 1 40257 0 SIIGMIDMFHK ______________________________ QAERSIIGMIDMFHKYTRRDDKIEKPSLLT R S I H K Y 0 0 0 1 0 0 0 1 1 3 0 1 2 1 0 1 0 0 0 0 0 0 11 0 1290.6464 P31151;Q86SG5 P31151 9 19 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 2 0.012407 76.282 By MS/MS 8 0 1 1 104990 0 104990 12663 750 13477 31956 22533 22533 505;506 1 0 895680 SIIKEPESAAEAVK CHHFFVVLSEADSKKSIIKEPESAAEAVKL KSIIKEPESAAEAVKLAFQQKPPPPPKKIY K S I V K L 3 0 0 0 0 0 3 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 14 1 1470.793 O76031 O76031 145 158 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2;3 4.7009E-07 183.06 By MS/MS 5.75 0.829 2 1 1 4 17416000 17416000 0 12664 344 13478 31957;31958;31959;31960 22534;22535;22536 22535 3 397720 0 SIILEGFK ______________________________ ______________________________ K S I F K S 0 0 0 0 0 0 1 1 0 2 1 1 0 1 0 1 0 0 0 0 0 0 8 0 905.52222 O95347 O95347 5 12 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0090006 122.18 By MS/MS 3 0 1 1 1888700 1888700 0 12665 385 13479 31961 22537 22537 1 49304 0 SIIQSAQQDSIK EFAIMQTPAGELYDKSIIQSAQQDSIKKAN YDKSIIQSAQQDSIKKANMKRENKAYSFKE K S I I K K 1 0 0 1 0 3 0 0 0 3 0 1 0 0 0 3 0 0 0 0 0 0 12 0 1316.6936 Q92616 Q92616 777 788 GCN1L1 Translational activator GCN1 yes yes 2 6.1461E-07 193.22 By MS/MS 2 0.816 1 1 1 3 2327600 2327600 0 12666 2068 13480 31962;31963;31964 22538;22539 22538 2 95689 0 SIIQSAQQDSIKK EFAIMQTPAGELYDKSIIQSAQQDSIKKAN DKSIIQSAQQDSIKKANMKRENKAYSFKEQ K S I K K A 1 0 0 1 0 3 0 0 0 3 0 2 0 0 0 3 0 0 0 0 0 0 13 1 1444.7886 Q92616 Q92616 777 789 GCN1L1 Translational activator GCN1 yes yes 2 0.011085 119.74 By MS/MS 2 0 1 1 383180 383180 0 12667 2068 13481 31965 22540 22540 1 19046 0 SIKENASAGVER ITDEKSFENIQNWMKSIKENASAGVERLLL WMKSIKENASAGVERLLLGNKCDMEAKRKV K S I E R L 2 1 1 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 12 1 1259.647 P51153 P51153 105 116 RAB13 Ras-related protein Rab-13 yes yes 2;3 0.026426 110.93 By MS/MS 9 0 2 2 1147300 1147300 0 12668 962 13482 31966;31967 22541;22542 22542 2 658460 0 SIKHEVER ADVLVDGYNVHYGARSIKHEVERRVVNQLA NVHYGARSIKHEVERRVVNQLAAAYEQDLL R S I E R R 0 1 0 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 8 1 996.53524 Q9H078 Q9H078 621 628 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.0039171 123.72 By MS/MS By matching 6.75 0.829 2 1 1 3 1 6082000 6064400 17570 12669 2448 13483 31968;31969;31970;31971 22543 22543 1 54623 53885 SIKHEVERR ADVLVDGYNVHYGARSIKHEVERRVVNQLA VHYGARSIKHEVERRVVNQLAAAYEQDLLP R S I R R V 0 2 0 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 9 2 1152.6364 Q9H078 Q9H078 621 629 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.013771 96.665 By MS/MS 6 0 1 1 7298400 7298400 0 12670 2448 13484 31972 22544 22544 1 56913 0 SIKNIQK VRNMATLKDITRRLKSIKNIQKITKSMKMV KDITRRLKSIKNIQKITKSMKMVAAAKYAR K S I Q K I 0 0 1 0 0 1 0 0 0 2 0 2 0 0 0 1 0 0 0 0 0 0 7 1 829.50215 P36542 P36542 37 43 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2 0.035855 138.85 By MS/MS 8 0 1 1 0 0 0 12671 805 13485 31973 22545 22545 1 0 0 SILDWTSFNQER WRNFADIDDSWKSIKSILDWTSFNQERIVD SIKSILDWTSFNQERIVDVAGPGGWNDPDM K S I E R I 0 1 1 1 0 1 1 0 0 1 1 0 0 1 0 2 1 1 0 0 0 0 12 0 1494.7103 P06280 P06280 241 252 GLA Alpha-galactosidase A yes yes 2 4.3678E-26 234.67 By MS/MS 6.5 0.5 1 1 2 330680 330680 0 12672 476 13486 31974;31975 22546;22547 22546 2 5909.4 0 SILFVPTSAPR MAYIHFTAEGEVTFKSILFVPTSAPRGLFD VTFKSILFVPTSAPRGLFDEYGSKKSDYIK K S I P R G 1 1 0 0 0 0 0 0 0 1 1 0 0 1 2 2 1 0 0 1 0 0 11 0 1186.671 P14625 P14625 385 395 HSP90B1 Endoplasmin yes yes 2 0.0015953 125.68 By MS/MS 5.5 1.12 1 1 1 1 4 19390000 19390000 0 12673 589 13487 31976;31977;31978;31979 22548;22549;22550 22548 3 503120 0 SILGLPPLPEDSIK LGGFEELQSMKAEKRSILGLPPLPEDSIKV RSILGLPPLPEDSIKVIRNMRAASPPASAS R S I I K V 0 0 0 1 0 0 1 1 0 2 3 1 0 0 3 2 0 0 0 0 0 0 14 0 1477.8392 Q5VSL9 Q5VSL9 313 326 STRIP1 Striatin-interacting protein 1 yes yes 2 0.0059973 100.88 By MS/MS 4 0 1 1 719180 719180 0 12674 1646 13488 31980 22551 22551 1 19633 0 SILKIDDVVNTR LVSVSALTLATETVRSILKIDDVVNTR___ TVRSILKIDDVVNTR_______________ R S I T R - 0 1 1 2 0 0 0 0 0 2 1 1 0 0 0 1 1 0 0 2 0 0 12 1 1371.7722 P50991 P50991 528 539 CCT4 T-complex protein 1 subunit delta yes yes 2;3 3.9816E-06 179.6 By MS/MS 7.5 1.5 1 2 2 2 2 1 10 352710000 352710000 0 12675 956 13489 31981;31982;31983;31984;31985;31986;31987;31988;31989;31990 22552;22553;22554;22555;22556;22557;22558 22557 7 5571500 0 SILLNCATPDAVVR ALTEELHQKVSEEAKSILLNCATPDAVVRL KSILLNCATPDAVVRLSAYSLGGFAAEWLS K S I V R L 2 1 1 1 1 0 0 0 0 1 2 0 0 0 1 1 1 0 0 2 0 0 14 0 1527.8079 Q63HN8 Q63HN8 3256 3269 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 2 3.5057E-05 156.36 By MS/MS 1.5 0.5 1 1 2 254960 254960 0 12676 1666 13490 31991;31992 22559 22559 1 12515 0 SILLSVPLLVVDNK LTTVGKFEEAVEKFRSILLSVPLLVVDNKQ RSILLSVPLLVVDNKQEIAEAQQLITICRE R S I N K Q 0 0 1 1 0 0 0 0 0 1 4 1 0 0 1 2 0 0 0 3 0 0 14 0 1508.9178 P53621 P53621 1031 1044 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.051341 69.01 By MS/MS 3.5 0.5 1 1 2 147560 147560 0 12677 1005 13491 31993;31994 22560 22560 1 3887.5 0 SILSPGGSCGPIK KKHVGGRVMVTDADRSILSPGGSCGPIKVK DRSILSPGGSCGPIKVKTEPTEDSGISLEM R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.0044541 106.4 By MS/MS 3 0 1 1 3118600 3118600 0 12678 1194 13492 31995 22561 22561 1 81411 0 SIMELMNVLELR EKLIKRQEELDRGYKSIMELMNVLELRKYE GYKSIMELMNVLELRKYEAIQLTFKQVSKN K S I L R K 0 1 1 0 0 0 2 0 0 1 3 0 2 0 0 1 0 0 0 1 0 0 12 0 1446.7575 Q9UQE7 Q9UQE7 1013 1024 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00028732 131.09 By MS/MS 3 0 1 1 104190 104190 0 12679 2860 13493 31996 22562;22563;22564 22564 1648;1649 3 2719.9 0 SINDPEHPLTLEELNVVEQVR VPDSIDAREIFDLIRSINDPEHPLTLEELN HPLTLEELNVVEQVRVQVSDPESTVAVAFT R S I V R V 0 1 2 1 0 1 4 0 1 1 3 0 0 0 2 1 1 0 0 3 0 0 21 0 2430.2391 Q9Y3D0 Q9Y3D0 52 72 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 3 0.0044659 73.448 By MS/MS 10 0 1 1 168220 168220 0 12680 2929 13494 31997 22565 22565 1 178800 0 SINNAEKR ______________________________ VLADALKSINNAEKRGKRQVLIRPCSKVIV K S I K R G 1 1 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 8 1 930.48829 P62244 P62244 13 20 RPS15A 40S ribosomal protein S15a yes yes 2 0.044332 117.81 By MS/MS By matching 10 0 2 1 1 751290 714850 36448 12681 1119 13495 31998;31999 22566 22566 1 759810 934860 SINNPDMR KKEGKLIMGIGHRVKSINNPDMRVQILKDY GIGHRVKSINNPDMRVQILKDYVRQHFPAT K S I M R V 0 1 2 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 8 0 945.43381 P53396 P53396 979 986 ACLY ATP-citrate synthase yes yes 2 0.014016 114.5 By MS/MS 4 0 1 1 2094800 2094800 0 12682 1001 13496 32000 22567 22567 1 57186 0 SINPDEAVAYGAAVQAAILSGDK QKLLQDFFNGKELNKSINPDEAVAYGAAVQ AYGAAVQAAILSGDKSENVQDLLLLDVTPL K S I D K S 6 0 1 2 0 1 1 2 0 2 1 1 0 0 1 2 0 0 1 2 0 0 23 0 2259.1383 P11142 P11142 362 384 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 6.55E-11 178.51 By MS/MS 6 0 1 1 672280 672280 0 12683 546 13497 32001 22568 22568 1 5242.5 0 SINQPVAFVR ______________________________ AALRRSINQPVAFVRRIPWTAASSQLKEHF R S I V R R 1 1 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 10 0 1129.6244 Q9GZT3 Q9GZT3 15 24 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 2.259E-21 237.92 By MS/MS By MS/MS 10 0 2 1 1 45400000 44976000 423120 12684 2443 13498 32002;32003 22569;22570 22570 2 47805000 10853000 SINSILDYISTSK LTYIRSAVTRNYSEKSINSILDYISTSKQM EKSINSILDYISTSKQMDLLQEFYETTLEA K S I S K Q 0 0 1 1 0 0 0 0 0 3 1 1 0 0 0 4 1 0 1 0 0 0 13 0 1439.7508 P61201 P61201 111 123 COPS2 COP9 signalosome complex subunit 2 yes yes 2 1.0526E-11 202 By MS/MS 6 0 1 1 1919200 1919200 0 12685 1092 13499 32004 22571 22571 1 14966 0 SIPLAMAPVFEQK HQYTLEPSEKPFDMKSIPLAMAPVFEQKAE MKSIPLAMAPVFEQKAEITLVATKPEKLAP K S I Q K A 2 0 0 0 0 1 1 0 0 1 1 1 1 1 2 1 0 0 0 1 0 0 13 0 1429.7639 Q9UBF2 Q9UBF2 578 590 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00017777 150.46 By MS/MS 4.33 0.471 2 1 3 1814600 1814600 0 12686 2748 13500;13501 32005;32006;32007 22572;22573;22574 22574 1605 3 62551 0 SIPLDEGEDEAQR LSTDMIFNNFLARLRSIPLDEGEDEAQRRR LRSIPLDEGEDEAQRRRKGKEDEGEEAASP R S I Q R R 1 1 0 2 0 1 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 13 0 1457.6634 Q14204 Q14204 2384 2396 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 4.5987E-05 159.94 By MS/MS By matching 1.33 0.471 2 1 2 1 1655900 1615800 40064 12687 1421 13502 32008;32009;32010 22575;22576;22577 22575 3 79356 40064 SIPLECPLSSPK DSTKLELALTGGEAKSIPLECPLSSPKGVL EAKSIPLECPLSSPKGVLFSSKSAEVCKQD K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 0.009598 97.456 By MS/MS 3.5 0.5 1 1 2 1033700 1033700 0 12688 2074 13503 32011;32012 22578 22578 1 27094 0 SIQADGLVWGSSK WDDETDMAKLEECVRSIQADGLVWGSSKLV VRSIQADGLVWGSSKLVPVGYGIKKLQIQC R S I S K L 1 0 0 1 0 1 0 2 0 1 1 1 0 0 0 3 0 1 0 1 0 0 13 0 1346.683 P24534 P24534 164 176 EEF1B2 Elongation factor 1-beta yes yes 2 1.4258E-05 171.62 By MS/MS 8 0 1 1 10615000 10615000 0 12689 677 13504 32013 22579 22579 1 700270 0 SIQDLTVTGTEPGQVSSR VPEIVISGNGQPRRRSIQDLTVTGTEPGQV DLTVTGTEPGQVSSRSSSPSVRMITTSGPT R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 O43318 O43318 439 456 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 2 1.7012E-33 238.67 By MS/MS By MS/MS 5 0 2 1 1 3093500 3050000 43450 12690 193 13505 32014;32015 22580;22581;22582 22582 3 125370 128570 SIQFVDWCPTGFK PKDVNAAIATIKTKRSIQFVDWCPTGFKVG KRSIQFVDWCPTGFKVGINYQPPTVVPGGD R S I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 13 0 1583.7442 P68363;P68366 P68363 340 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 2 1.0796E-18 232.17 By MS/MS 6 1.67 1 1 1 4 1 1 1 10 413690000 413690000 0 12691 1185;1186 13506 32016;32017;32018;32019;32020;32021;32022;32023;32024;32025 22583;22584;22585;22586;22587;22588;22589;22590;22591;22592;22593;22594 22586 12 3315300 0 SIQLDGLVWGASK WDDETDMAQLEACVRSIQLDGLVWGASKLV VRSIQLDGLVWGASKLVPVGYGIRKLQIQC R S I S K L 1 0 0 1 0 1 0 2 0 1 2 1 0 0 0 2 0 1 0 1 0 0 13 0 1372.7351 P29692 P29692 220 232 EEF1D Elongation factor 1-delta yes yes 2 1.4685E-07 183.06 By MS/MS 7.5 0.5 1 1 2 590120 590120 0 12692 726 13507 32026;32027 22595 22595 1 21999 0 SIRPGLSPYR NFKTCEESSFCKRQRSIRPGLSPYRALLDS CKRQRSIRPGLSPYRALLDSLQLGPDSLTV R S I Y R A 0 2 0 0 0 0 0 1 0 1 1 0 0 0 2 2 0 0 1 0 0 0 10 1 1144.6353 Q14697 Q14697 52 61 GANAB Neutral alpha-glucosidase AB yes yes 3 0.025941 77.379 By MS/MS 4 0 1 1 957220 957220 0 12693 1443 13508 32028 22596 22596 1 26131 0 SISISVAR GGFGSRSLVNLGGSKSISISVARGGGRGSG VNLGGSKSISISVARGGGRGSGFGGGYGGG K S I A R G 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 1 0 0 8 0 831.48142 P04264;CON__P04264 P04264 75 82 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.0053588 135.77 By MS/MS By MS/MS 4.55 2.61 2 1 1 2 1 1 1 1 1 4 7 27884000 4228400 23656000 + 12694 450;45 13509 32029;32030;32031;32032;32033;32034;32035;32036;32037;32038;32039 22597;22598;22599;22600;22601;22602;22603;22604;22605;22606;22607;22608;22609 22603 13 176530 47114000 SISLLCLEGLQK IPTSVEESGKKEKGKSISLLCLEGLQKIFS KGKSISLLCLEGLQKIFSAVQQFYQPKIQQ K S I Q K I 0 0 0 0 1 1 1 1 0 1 4 1 0 0 0 2 0 0 0 0 0 0 12 0 1359.7432 Q9NVI1 Q9NVI1 903 914 FANCI Fanconi anemia group I protein yes yes 2 1.2736E-11 211.78 By MS/MS 3.5 0.5 1 1 2 777450 777450 0 12695 2654 13510 32040;32041 22610 22610 1 20433 0 SISLPSLDLVSAK IMDFKKFSRSYQFSKSISLPSLDLVSAKIE SKSISLPSLDLVSAKIEGNLIFDPNNYLPK K S I A K I 1 0 0 1 0 0 0 0 0 1 3 1 0 0 1 4 0 0 0 1 0 0 13 0 1328.7551 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 639 651 yes yes 2 0.0028316 112.94 By MS/MS 4 2 1 1 1 1 1 1 1 7 1713300 1713300 0 + 12696 31 13511 32042;32043;32044;32045;32046;32047;32048 22611 22611 1 51269 0 SISLYQR GTPEKKEEPDPLQDKSISLYQRFKKTFRQY EPDPLQDKSISLYQRFKKTFRQYGKVLIPV K S I Q R F 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 7 0 865.46577 Q96ND0 Q96ND0 119 125 FAM210A Protein FAM210A yes yes 2 0.015469 138.85 By MS/MS 9 0 1 1 1865900 1865900 0 12697 2232 13512 32049 22612 22612 1 1070800 0 SISLYYTGEK EKTFEEKQGTEIDGRSISLYYTGEKGQNQD EIDGRSISLYYTGEKGQNQDYRGGKNSTWS R S I E K G 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P19338 P19338 458 467 NCL Nucleolin yes yes 2 0.0057984 143.03 By MS/MS 4 0 1 1 0 0 0 12698 629 13513 32050 22613 22613 1 0 0 SISQSISGQK ADRQREYLLDMIPPRSISQSISGQK_____ MIPPRSISQSISGQK_______________ R S I Q K - 0 0 0 0 0 2 0 1 0 2 0 1 0 0 0 4 0 0 0 0 0 0 10 0 1033.5404 Q8WXI9 Q8WXI9 584 593 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0006226 140.17 By MS/MS By matching 5.33 0.471 2 1 2 1 1821600 1813800 7785.1 12699 2047 13514 32051;32052;32053 22614 22614 1 42715 23036 SITCLDISSR KFLAPYTTFSRIHTKSITCLDISSRGGLGV RIHTKSITCLDISSRGGLGVSSSTDGTMKI K S I S R G 0 1 0 1 1 0 0 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 10 0 1150.5652 Q9BRP4 Q9BRP4 94 103 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 2 0.031991 121.73 By MS/MS 7 0 1 1 598450 598450 0 12700 2326 13515 32054 22615 22615 0 10695 0 SITCWTLSR PHLIQCLSDKKALVRSITCWTLSRYAHWVV KKALVRSITCWTLSRYAHWVVSQPPDTYLK R S I S R Y 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 2 2 1 0 0 0 0 9 0 1122.5492 Q92973 Q92973 464 472 TNPO1 Transportin-1 yes yes 2 0.00063318 150.36 By MS/MS 4.5 0.5 1 1 2 909770 909770 0 12701 2093 13516 32055;32056 22616 22616 1 28978 0 SITILSTPEGTSAACK KIDVHRKENAGAAEKSITILSTPEGTSAAC ITILSTPEGTSAACKSILEIMHKEAQDIKF K S I C K S 2 0 0 0 1 0 1 1 0 2 1 1 0 0 1 3 3 0 0 0 0 0 16 0 1634.8185 O00425 O00425 243 258 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 2 9.8114E-08 169.89 By MS/MS 5 0 1 1 748030 748030 0 12702 93 13517 32057 22617 22617 1 30747 0 SITNTTVCTK DDNRILRPWQSSETRSITNTTVCTKCGGAG SSETRSITNTTVCTKCGGAGHIASDCKFQR R S I T K C 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 4 0 0 1 0 0 10 0 1123.5543 Q15637 Q15637 272 281 SF1 Splicing factor 1 yes yes 2 0.00054013 143.4 By MS/MS 5 0 1 1 431120 431120 0 12703 1511 13518 32058 22618 22618 1 17721 0 SITVLVEGENTR MQEHSDQVPVGNIPRSITVLVEGENTRIAQ IPRSITVLVEGENTRIAQPGDHVSVTGIFL R S I T R I 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 12 0 1316.6936 P33993 P33993 252 263 MCM7 DNA replication licensing factor MCM7 yes yes 2 4.5887E-07 217.02 By MS/MS By matching 5.33 0.471 2 1 2 1 16242000 16180000 61424 12704 775 13519 32059;32060;32061 22619;22620 22620 2 549660 181750 SIVDKEGVPR LEEFELLGKAYGKAKSIVDKEGVPRFYIRI YGKAKSIVDKEGVPRFYIRILADLEDYLNE K S I P R F 0 1 0 1 0 0 1 1 0 1 0 1 0 0 1 1 0 0 0 2 0 0 10 1 1098.6033 Q99613;B5ME19 Q99613 95 104 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0032337 147.4 By MS/MS By matching 4.33 0.471 2 1 2 1 5717100 5658900 58176 12705 2275 13520 32062;32063;32064 22621 22621 1 162560 121560 SIVEEIEDLVAR ALQTASHLSQQADLRSIVEEIEDLVARLDE DLRSIVEEIEDLVARLDELGGVYLQFEEGL R S I A R L 1 1 0 1 0 0 3 0 0 2 1 0 0 0 0 1 0 0 0 2 0 0 12 0 1371.7246 P04844 P04844 179 190 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 1.9811E-47 285.16 By MS/MS 6 0 1 1 0 0 0 12706 459 13521 32065 22622 22622 1 0 0 SIVGEIVR LVAAVSLWATDYGMKSIVGEIVREIGQKCP ATDYGMKSIVGEIVREIGQKCPQELSRDPS K S I V R E 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 0 2 0 0 8 0 871.51272 Q15021 Q15021 273 280 NCAPD2 Condensin complex subunit 1 yes yes 2 0.042942 94.114 By MS/MS 3.5 0.5 1 1 2 1607200 1607200 0 12707 1464 13522 32066;32067 22623 22623 1 42257 0 SIVQLYVAPAPEK KEPKSTRLFTFRHHRSIVQLYVAPAPEKSR HRSIVQLYVAPAPEKSRKHLALYSLAIFVV R S I E K S 2 0 0 0 0 1 1 0 0 1 1 1 0 0 2 1 0 0 1 2 0 0 13 0 1413.7868 Q96NT5 Q96NT5 250 262 SLC46A1 Proton-coupled folate transporter yes yes 2 0.0051476 102.62 By MS/MS 1.5 0.5 1 1 2 269990 269990 0 12708 2234 13523 32068;32069 22624 22624 1 13271 0 SIYGEKFEDENFILK CQGGDFTRHNGTGGKSIYGEKFEDENFILK SIYGEKFEDENFILKHTGPGILSMANAGPN K S I L K H 0 0 1 1 0 0 3 1 0 2 1 2 0 2 0 1 0 0 1 0 0 0 15 1 1830.904 P62937 P62937 77 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2;3 5.0187E-09 187.62 By MS/MS 10 0 2 2 1725900 1725900 0 12709 1163 13524 32070;32071 22625;22626 22626 2 1834400 0 SIYSLILGQDNAADQSR VSSASWYFLNVFGLRSIYSLILGQDNAADQ YSLILGQDNAADQSRMMQEQMTGAAMAMPA R S I S R M 2 1 1 2 0 2 0 1 0 2 2 0 0 0 0 3 0 0 1 0 0 0 17 0 1849.917 Q9P0I2 Q9P0I2 181 197 EMC3 ER membrane protein complex subunit 3 yes yes 2 1.2403E-18 206.67 By MS/MS 8.5 0.5 1 1 2 853850 853850 0 12710 2725 13525 32072;32073 22627 22627 1 89005 0 SIYYITGESK TSLSEYVSRMKETQKSIYYITGESKEQVAN KETQKSIYYITGESKEQVANSAFVERVRKR K S I S K E 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P08238;Q58FF8 P08238 482 491 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 4.9015E-07 189.38 By MS/MS 4 2 1 1 1 1 1 1 1 7 46138000 46138000 0 12711 501 13526 32074;32075;32076;32077;32078;32079;32080 22628;22629;22630;22631;22632;22633 22630 6 1446800 0 SKADYTSHLR MRQAAAIILNIYCSRSKADYTSHLRSLVSG IYCSRSKADYTSHLRSLVSGLIRLFNDSSP R S K L R S 1 1 0 1 0 0 0 0 1 0 1 1 0 0 0 2 1 0 1 0 0 0 10 1 1176.5887 Q92616 Q92616 2182 2191 GCN1L1 Translational activator GCN1 yes yes 3 0.028369 77.593 By MS/MS 3 0.816 1 1 1 3 1371800 1371800 0 12712 2068 13527 32081;32082;32083 22634 22634 1 57879 0 SKAEAESLYQSK IIAEVKAQYEDIAQKSKAEAESLYQSKYEE AQKSKAEAESLYQSKYEELQITAGRHGDSV K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 12 1 1339.662 P04264;CON__P04264 P04264 365 376 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 7.6581E-26 244.71 By MS/MS By MS/MS 5.35 2.91 3 4 3 3 4 3 2 2 4 3 14 17 46130000 18923000 27208000 + 12713 450;45 13528 32084;32085;32086;32087;32088;32089;32090;32091;32092;32093;32094;32095;32096;32097;32098;32099;32100;32101;32102;32103;32104;32105;32106;32107;32108;32109;32110;32111;32112;32113;32114 22635;22636;22637;22638;22639;22640;22641;22642;22643;22644;22645;22646;22647;22648;22649;22650;22651;22652;22653;22654;22655;22656;22657;22658;22659;22660 22658 26 3677800 59021000 SKDFVQVMR LCRVEGMTELYFQLKSKDFVQVMRHRDDER LYFQLKSKDFVQVMRHRDDERQKVCLDIIY K S K M R H 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 9 1 1108.5699 P78527 P78527 2417 2425 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0050637 101.66 By MS/MS 1.5 0.5 1 1 2 741110 741110 0 12714 1197 13529 32115;32116 22661;22662 22662 976 2 36469 0 SKDIFDQLAK SAEDIAKIKKFSKTRSKDIFDQLAKSLAPS FSKTRSKDIFDQLAKSLAPSIHGHDYVKKA R S K A K S 1 0 0 2 0 1 0 0 0 1 1 2 0 1 0 1 0 0 0 0 0 0 10 1 1163.6186 P25205 P25205 292 301 MCM3 DNA replication licensing factor MCM3 yes yes 2;3 0.00040526 145.25 By MS/MS 4 0.707 1 2 1 4 6280900 6280900 0 12715 683 13530 32117;32118;32119;32120 22663;22664 22664 2 175790 0 SKDKLDQVSSEIK EELAKHGMKVVLISRSKDKLDQVSSEIKEK SRSKDKLDQVSSEIKEKFKVETRTIAVDFA R S K I K E 0 0 0 2 0 1 1 0 0 1 1 3 0 0 0 3 0 0 0 1 0 0 13 2 1475.7831 Q53GQ0 Q53GQ0 83 95 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2;3 6.8327E-17 232.78 By MS/MS By matching 8.25 0.433 3 1 3 1 14782000 14752000 29238 12716 1584 13531 32121;32122;32123;32124 22665;22666 22666 2 1042400 249430 SKDTYLLYEGR HMPKSTIETALKMEKSKDTYLLYEGRGPGG KMEKSKDTYLLYEGRGPGGSSLLIEALSNS K S K G R G 0 1 0 1 0 0 1 1 0 0 2 1 0 0 0 1 1 0 2 0 0 0 11 1 1343.6721 Q9BSH4 Q9BSH4 131 141 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2;3 0.00010641 174.77 By MS/MS 8.33 0.471 2 1 3 11840000 11840000 0 12717 2337 13532 32125;32126;32127 22667;22668 22667 2 812460 0 SKDVNGPEPLNSR MRTLAHFRPIEDNEKSKDVNGPEPLNSRSN EKSKDVNGPEPLNSRSNKLHFAFRLYDLDK K S K S R S 0 1 2 1 0 0 1 1 0 0 1 1 0 0 2 2 0 0 0 1 0 0 13 1 1411.7056 Q99653 Q99653 99 111 CHP1 Calcineurin B homologous protein 1 yes yes 2 9.2844E-07 184.87 By MS/MS 9 0 1 1 255240 255240 0 12718 2281 13533 32128 22669 22669 1 146480 0 SKEEAEALYHSK IIAEVKAQYEEIAQRSKEEAEALYHSKYEE AQRSKEEAEALYHSKYEELQVTVGRHGDSL R S K S K Y 2 0 0 0 0 0 3 0 1 0 1 2 0 0 0 2 0 0 1 0 0 0 12 1 1390.6729 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 363 374 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 3.3848E-05 171.99 By MS/MS By MS/MS 4.78 2.48 2 2 4 4 3 3 1 1 2 1 12 11 17363000 10824000 6538300 + 12719 52 13534 32129;32130;32131;32132;32133;32134;32135;32136;32137;32138;32139;32140;32141;32142;32143;32144;32145;32146;32147;32148;32149;32150;32151 22670;22671;22672;22673;22674;22675;22676;22677;22678;22679;22680;22681;22682;22683;22684;22685;22686 22686 17 1147500 17860000 SKESSQVTSR KSFLEEVLASGLHSRSKESSQVTSRSASRR GLHSRSKESSQVTSRSASRR__________ R S K S R S 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 4 1 0 0 1 0 0 10 1 1107.552 Q9NRW7 Q9NRW7 556 565 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 2 0.010334 119.22 By MS/MS 5 0 1 1 268140 268140 0 12720 2612 13535 32152 22687 22687 1 11022 0 SKFDNLYGCR ILKVPAINVNDSVTKSKFDNLYGCRESLID DSVTKSKFDNLYGCRESLIDGIKRATDVMI K S K C R E 0 1 1 1 1 0 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 10 1 1258.5765 P23526 P23526 187 196 AHCY Adenosylhomocysteinase yes yes 2 0.00461 140.11 By MS/MS 7 0 1 1 4832100 4832100 0 12721 670 13536 32153 22688 22688 1 86351 0 SKFENEEFFR ______________________________ VPDQRSKFENEEFFRKLSRECEIKYTGFRD R S K F R K 0 1 1 0 0 0 3 0 0 0 0 1 0 3 0 1 0 0 0 0 0 0 10 1 1331.6146 Q13951 Q13951 10 19 CBFB Core-binding factor subunit beta yes yes 2 0.0029488 148.91 By MS/MS 9 0 1 1 1438500 1438500 0 12722 1404 13537 32154 22689 22689 1 825560 0 SKGQESFKK SNQNGKDSKPSSTPRSKGQESFKKQEKTPK PSSTPRSKGQESFKKQEKTPKTPKGPSSVE R S K K K Q 0 0 0 0 0 1 1 1 0 0 0 3 0 1 0 2 0 0 0 0 0 0 9 2 1037.5506 P06748 P06748 222 230 NPM1 Nucleophosmin yes yes 3 0.048377 74.165 By MS/MS 2 0 1 1 188810 188810 0 12723 485 13538 32155 22690 22690 1 9384.8 0 SKIETEIKNK KATRKRVRDALTAEKSKIETEIKNKMQQKS LTAEKSKIETEIKNKMQQKSQKKAELLDNE K S K N K M 0 0 1 0 0 0 2 0 0 2 0 3 0 0 0 1 1 0 0 0 0 0 10 2 1188.6714 Q9HB71 Q9HB71 34 43 CACYBP Calcyclin-binding protein yes yes 2;3 5.5719E-11 229.82 By MS/MS 8 0 2 2 562030 562030 0 12724 2549 13539 32156;32157 22691;22692 22692 2 37077 0 SKLESELANFGPR EQTKTRHLALNLQEKSKLESELANFGPRIN EKSKLESELANFGPRINDIKRIIQSREREM K S K P R I 1 1 1 0 0 0 2 1 0 0 2 1 0 1 1 2 0 0 0 0 0 0 13 1 1446.7467 Q14683 Q14683 735 747 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 1.329E-06 180.24 By MS/MS 3 0 1 1 1203300 1203300 0 12725 1440 13540 32158 22693 22693 1 31413 0 SKLSSALQK PLMQARLEPLYSPIRSKLSSALQKWHPSDS LYSPIRSKLSSALQKWHPSDSSAKLILQPW R S K Q K W 1 0 0 0 0 1 0 0 0 0 2 2 0 0 0 3 0 0 0 0 0 0 9 1 960.5604 Q9UBB9 Q9UBB9 572 580 TFIP11 Tuftelin-interacting protein 11 yes yes 3 0.041834 72.928 By MS/MS 3.5 0.5 1 1 2 327190 327190 0 12726 2746 13541 32159;32160 22694 22694 1 8898.7 0 SKNTVSSAR ______________________________ ______________________________ M S K A R F 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 1 0 0 9 1 948.49886 O15511 O15511 2 10 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 2 0.0011256 155.58 By MS/MS 9.5 0.5 1 1 2 719610 719610 0 12727 179 13542 32161;32162 22695 22695 1 748040 0 SKPVFSESLSD DTSQFILNRLEQTQKSKPVFSESLSD____ QTQKSKPVFSESLSD_______________ K S K S D - 0 0 0 1 0 0 1 0 0 0 1 1 0 1 1 4 0 0 0 1 0 0 11 1 1194.5768 O60220 O60220 87 97 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 2 0.0014945 154.85 By MS/MS By matching 10 0 2 1 1 1698800 1662800 35971 12728 236 13543 32163;32164 22696 22696 1 1767400 922630 SKSESPKEPEQLR ______________________________ ______________________________ M S K L R K 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 3 0 0 0 0 0 0 13 2 1513.7736 P09651 P09651 2 14 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 3 0.0019116 102.9 By MS/MS 8 0 1 1 1543600 1543600 0 12729 519 13544 32165 22697 22697 1 101830 0 SKTEALKK SEISLKNDLEKGDVKSKTEALKKVIIMILN LEKGDVKSKTEALKKVIIMILNGEKLPGLL K S K K K V 1 0 0 0 0 0 1 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 8 2 903.53893 P53618 P53618 37 44 COPB1 Coatomer subunit beta yes yes 2;3 0.001771 180.93 By MS/MS 4.33 0.471 2 1 3 1187000 1187000 0 12730 1004 13545 32166;32167;32168 22698;22699 22699 2 33962 0 SKVEETTEHLVTK HGKDKENRGINTLERSKVEETTEHLVTKSR ERSKVEETTEHLVTKSRLPLRAQINL____ R S K T K S 0 0 0 0 0 0 3 0 1 0 1 2 0 0 0 1 3 0 0 2 0 0 13 1 1499.7831 P52732 P52732 1033 1045 KIF11 Kinesin-like protein KIF11 yes yes 3 0.021536 72.615 By MS/MS By matching 3.33 0.471 2 1 2 1 990690 967580 23107 12731 990 13546 32169;32170;32171 22700 22700 1 25775 33117 SKVTLLEGDHVR FVIPKELPFGDKDTKSKVTLLEGDHVRFNI DTKSKVTLLEGDHVRFNISTDRRDKLERAT K S K V R F 0 1 0 1 0 0 1 1 1 0 2 1 0 0 0 1 1 0 0 2 0 0 12 1 1352.7412 O75534 O75534 306 317 CSDE1 Cold shock domain-containing protein E1 yes yes 3 0.0091357 90.689 By MS/MS 5.5 0.5 1 1 2 3506100 3506100 0 12732 316 13547 32172;32173 22701 22701 1 107810 0 SKYHPDEVGK MQDFFLAHKDEEWFRSKYHPDEVGKRRQEA EEWFRSKYHPDEVGKRRQEARGALQNRLRV R S K G K R 0 0 0 1 0 0 1 1 1 0 0 2 0 0 1 1 0 0 1 1 0 0 10 1 1158.5669 Q9BXP5 Q9BXP5 199 208 SRRT Serrate RNA effector molecule homolog yes yes 3 0.049706 77.387 By MS/MS 3.5 0.5 1 1 2 433850 433850 0 12733 2402 13548 32174;32175 22702 22702 1 11790 0 SLAALASR KVLADLAIYEPKTFKSLAALASRRRHEGFA YEPKTFKSLAALASRRRHEGFAAALGDGKE K S L S R R 3 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 8 0 787.4552 Q9BYC9 Q9BYC9 115 122 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 0.0057507 140.09 By MS/MS 9 0 1 1 0 0 0 12734 2411 13549 32176 22703 22703 1 0 0 SLAASNPILTAK VYTRRKLDAVYYYMRSLAASNPILTAKESL YMRSLAASNPILTAKESLMSLFEETKRKAE R S L A K E 3 0 1 0 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1184.6765 Q86US8 Q86US8 792 803 SMG6 Telomerase-binding protein EST1A yes yes 2 0.0021014 120.77 By MS/MS 3 0 1 1 309400 309400 0 12735 1824 13550 32177 22704 22704 1 8076.9 0 SLAASSSFYGQR ILADSRHLWSPFGLRSLAASSSFYGQRNSE GLRSLAASSSFYGQRNSEHDPPYWRGAVWL R S L Q R N 2 1 0 0 0 1 0 1 0 0 1 0 0 1 0 4 0 0 1 0 0 0 12 0 1272.6099 Q13724 Q13724 730 741 MOGS Mannosyl-oligosaccharide glucosidase yes yes 2 0.0011922 143.5 By MS/MS 5 0 1 1 1467900 1467900 0 12736 1396 13551 32178 22705 22705 1 60338 0 SLADCNFSYTSSR RRAQSLKAPSIATIKSLADCNFSYTSSRDA IKSLADCNFSYTSSRDAFGYATLKRLQQQR K S L S R D 1 1 1 1 1 0 0 0 0 0 1 0 0 1 0 4 1 0 1 0 0 0 13 0 1506.6409 Q6R327 Q6R327 1313 1325 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 1.8525E-06 176.18 By MS/MS 2 0 1 1 184620 184620 0 12737 1722 13552 32179 22706 22706 1 9176.8 0 SLADELALVDVLEDK VGQVGMACAISILGKSLADELALVDVLEDK SLADELALVDVLEDKLKGEMMDLQHGSLFL K S L D K L 2 0 0 3 0 0 2 0 0 0 4 1 0 0 0 1 0 0 0 2 0 0 15 0 1628.8509 P07195 P07195 44 58 LDHB L-lactate dehydrogenase B chain yes yes 2 7.3507E-10 183.99 By MS/MS 8 0 1 1 169450 169450 0 12738 486 13553 32180 22707;22708 22708 2 11179 0 SLADIAREEASNFR RHVGMAVAGLLADARSLADIAREEASNFRS RSLADIAREEASNFRSNFGYNIPLKHLADR R S L F R S 3 2 1 1 0 0 2 0 0 1 1 0 0 1 0 2 0 0 0 0 0 0 14 1 1577.7798 P25788 P25788 87 100 PSMA3 Proteasome subunit alpha type-3 yes yes 2;3 0.0018015 117.86 By MS/MS 8.5 0.5 2 2 4 10044000 10044000 0 12739 690 13554 32181;32182;32183;32184 22709;22710 22709 2 754540 0 SLADQGIINYPYSTR EPILQKLVAAFGELRSLADQGIINYPYSTR SLADQGIINYPYSTREVVNIVKHLQKFPTE R S L T R E 1 1 1 1 0 1 0 1 0 2 1 0 0 0 1 2 1 0 2 0 0 0 15 0 1696.842 A3KMH1 A3KMH1 964 978 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 8.9722E-29 245.55 By MS/MS 3 0.816 1 1 1 3 2034100 2034100 0 12740 13 13555 32185;32186;32187 22711;22712 22712 2 72220 0 SLAEACSDGDVNAVR MKAENSHNAGQVDTRSLAEACSDGDVNAVR SLAEACSDGDVNAVRKLLDEGRSVNEHTEE R S L V R K 3 1 1 2 1 0 1 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 15 0 1562.6995 Q8IWZ3 Q8IWZ3 208 222 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 2 8.3491E-63 290.28 By MS/MS 2 0 1 1 204040 204040 0 12741 1868 13556 32188 22713 22713 1 10142 0 SLAEACSEGDVNAVR MRAESTANAGQSDNRSLAEACSEGDVNAVR SLAEACSEGDVNAVRKLLIEGRSVNEHTEE R S L V R K 3 1 1 1 1 0 2 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 15 0 1576.7151 O75179 O75179 237 251 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.053013 65.179 By MS/MS 1.5 0.5 1 1 2 319200 319200 0 12742 290 13557 32189;32190 22714 22714 1 15697 0 SLAETVLNFPLDK MRQRNNLLCNGLSLKSLAETVLNFPLDKSL LKSLAETVLNFPLDKSLLLRCSNWDAETLT K S L D K S 1 0 1 1 0 0 1 0 0 0 3 1 0 1 1 1 1 0 0 1 0 0 13 0 1445.7766 Q9NVH0 Q9NVH0 209 221 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 1.2395E-11 199.8 By MS/MS 5.5 0.5 1 1 2 644850 644850 0 12743 2651 13558 32191;32192 22715 22715 1 13422 0 SLAGSSGPGASSGTSGDHGELVVR VILRDIARARENIQKSLAGSSGPGASSGTS ASSGTSGDHGELVVRIASLEVENQSLRGVV K S L V R I 2 1 0 1 0 0 1 6 1 0 2 0 0 0 1 6 1 0 0 2 0 0 24 0 2184.0407 P29692 P29692 60 83 EEF1D Elongation factor 1-delta yes yes 2;3 4.1818E-16 173.19 By MS/MS By matching 8 1.07 3 2 1 1 6 1 12138000 12116000 21812 12744 726 13559 32193;32194;32195;32196;32197;32198;32199 22716;22717;22718;22719 22719 4 465470 89543 SLAILSLAENEIR NIITSLRMAPAYLPRSLAILSLAENEIRDL PRSLAILSLAENEIRDLNEISFLASLTELE R S L I R D 2 1 1 0 0 0 2 0 0 2 3 0 0 0 0 2 0 0 0 0 0 0 13 0 1427.7984 Q8IW35 Q8IW35 171 183 CEP97 Centrosomal protein of 97 kDa yes yes 2 1.0015E-11 248.09 By MS/MS 3.5 0.5 1 1 2 303110 303110 0 12745 1860 13560 32200;32201 22720 22720 1 8236.1 0 SLANAESQQQR EYEREYRPEYERLKKSLANAESQQQREQLE RLKKSLANAESQQQREQLERLRKDMGSVAL K S L Q R E 2 1 1 0 0 3 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 11 0 1230.5953 Q9HCN4 Q9HCN4 279 289 GPN1 GPN-loop GTPase 1 yes yes 2 6.1795E-07 184.71 By MS/MS 7 0 1 1 1497100 1497100 0 12746 2562 13561 32202 22721 22721 1 26753 0 SLANAESQQQREQLER EYEREYRPEYERLKKSLANAESQQQREQLE LANAESQQQREQLERLRKDMGSVALDAGTA K S L E R L 2 2 1 0 0 4 3 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 16 1 1885.9242 Q9HCN4 Q9HCN4 279 294 GPN1 GPN-loop GTPase 1 yes yes 3 0.049448 56.793 By MS/MS 7 0 1 1 743380 743380 0 12747 2562 13562 32203 22722 22722 1 13284 0 SLATVHPDSSNLIPK SPASADQRIQEAWKRSLATVHPDSSNLIPK SLATVHPDSSNLIPKLFRPAAFLPFMAPTV R S L P K L 1 0 1 1 0 0 0 0 1 1 2 1 0 0 2 3 1 0 0 1 0 0 15 0 1577.8413 Q6P4A7 Q6P4A7 92 106 SFXN4 Sideroflexin-4 yes yes 2 0.00010063 136.53 By MS/MS 8 0 1 1 2435100 2435100 0 12748 1709 13563 32204 22723 22723 1 160640 0 SLDAFPEDFCR KEPAEKQKFFQELSKSLDAFPEDFCRHKVL ELSKSLDAFPEDFCRHKVLPQLLTAFEFGN K S L C R H 1 1 0 2 1 0 1 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 11 0 1355.5816 Q96KG9 Q96KG9 300 310 SCYL1 N-terminal kinase-like protein yes yes 2 0.0018003 122.94 By MS/MS 4.5 0.5 1 1 2 1163300 1163300 0 12749 2220 13564 32205;32206 22724 22724 1 33900 0 SLDEVYPDPVR EEVPLALTAQVPGLRSLDEVYPDPVRVVSV PGLRSLDEVYPDPVRVVSVGVPVAHALDPA R S L V R V 0 1 0 2 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 2 0 0 11 0 1288.6299 Q5JTZ9 Q5JTZ9 712 722 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.00031295 150.35 By MS/MS By matching 4.33 0.471 2 1 2 1 11700000 11654000 45690 12750 1611 13565 32207;32208;32209 22725;22726 22725 2 318140 95473 SLDGVTNDR ______________________________ NIPKAKSLDGVTNDRTASQGQWGRAWEVDW K S L D R T 0 1 1 2 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 975.46214 Q9UBM7 Q9UBM7 14 22 DHCR7 7-dehydrocholesterol reductase yes yes 2 5.0901E-06 177.36 By MS/MS By matching 3.89 2.6 2 2 1 1 2 1 8 1 9921900 9850900 71010 12751 2753 13566 32210;32211;32212;32213;32214;32215;32216;32217;32218 22727;22728;22729;22730 22728 4 308470 291510 SLDIQVPNFPADETK LESLRVIITNFPAAKSLDIQVPNFPADETK SLDIQVPNFPADETKGFHQVPFAPIVFIER K S L T K G 1 0 1 2 0 1 1 0 0 1 1 1 0 1 2 1 1 0 0 1 0 0 15 0 1672.8308 P47897 P47897 587 601 QARS Glutamine--tRNA ligase yes yes 2 0.0048583 134.49 By MS/MS 5 0 1 1 1134900 1134900 0 12752 896 13567 32219 22731 22731 1 46650 0 SLDIYSFIK GQEEKEEDLKKKELKSLDIYSFIKEANTLN KKKELKSLDIYSFIKEANTLNLAPYDACWN K S L I K E 0 0 0 1 0 0 0 0 0 2 1 1 0 1 0 2 0 0 1 0 0 0 9 0 1084.5805 Q9NR50 Q9NR50 260 268 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 2 0.012004 101.25 By MS/MS 6 0 1 1 777300 777300 0 12753 2601 13568 32220 22732 22732 1 6061.4 0 SLDLDSIIAEVK QISETNVILSMDNNRSLDLDSIIAEVKAQY NNRSLDLDSIIAEVKAQYEDIAQKSKAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1301.7078 P04264;CON__P04264;CON__Q5XQN5 P04264 344 355 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.8664E-33 267.29 By MS/MS By MS/MS 5.64 2.85 2 2 1 3 4 2 1 2 2 3 13 9 50554000 47779000 2775200 + 12754 450;45;61 13569 32221;32222;32223;32224;32225;32226;32227;32228;32229;32230;32231;32232;32233;32234;32235;32236;32237;32238;32239;32240;32241;32242 22733;22734;22735;22736;22737;22738;22739;22740;22741;22742;22743;22744;22745;22746;22747;22748;22749;22750;22751;22752;22753;22754;22755;22756;22757 22747 25 8649500 6646000 SLDLLGLEK IFFRAAAEEGHIIPRSLDLLGLEKLDCGRF GHIIPRSLDLLGLEKLDCGRFPSDHWGLLC R S L E K L 0 0 0 1 0 0 1 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 9 0 986.56481 O95551 O95551 333 341 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes yes 2 0.0018325 131.62 By MS/MS 7 0 1 1 257280 257280 0 12755 397 13570 32243 22758 22758 1 4597.7 0 SLDNNYSTPNER DREEIQMSNMGSNTKSLDNNYSTPNERGDH NTKSLDNNYSTPNERGDHNRTLDRSGDLGD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 O60716 O60716 899 910 CTNND1 Catenin delta-1 yes yes 2 0.00048389 139.32 By MS/MS 4.5 0.5 1 1 2 1975300 1975300 0 12756 260 13571 32244;32245 22759 22759 1 58430 0 SLDQDPVVR VMEWMNNVMNAQAKKSLDQDPVVRAQEIKT NAQAKKSLDQDPVVRAQEIKTKIKELNNTC K S L V R A 0 1 0 2 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 9 0 1027.5298 Q92598 Q92598 773 781 HSPH1 Heat shock protein 105 kDa yes yes 2 0.020713 96.331 By MS/MS 4 0 1 1 1082200 1082200 0 12757 2063 13572 32246 22760 22760 1 29543 0 SLDQYDFSR GPGPLRRTFLVPEIKSLDQYDFSRAKAAAS LVPEIKSLDQYDFSRAKAAASLAWVLRAAF K S L S R A 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 2 0 0 1 0 0 0 9 0 1129.504 Q9P1Y5 Q9P1Y5 23 31 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.0023568 125.97 By MS/MS By matching 3 0 2 1 1 557910 528380 29536 12758 2733 13573 32247;32248 22761 22761 1 13793 42331 SLDVGGPLR LAQMIEKKRKKENSRSLDVGGPLRYAVYGF KKENSRSLDVGGPLRYAVYGFFFTGPLSHF R S L L R Y 0 1 0 1 0 0 0 2 0 0 2 0 0 0 1 1 0 0 0 1 0 0 9 0 912.50288 Q9NR77 Q9NR77 66 74 PXMP2 Peroxisomal membrane protein 2 yes yes 2 0.011469 101.6 By MS/MS 9.5 0.5 1 1 2 604020 604020 0 12759 2603 13574 32249;32250 22762 22762 1 363950 0 SLEAAQDAR GAFEAMAHVVSLVHRSLEAAQDARGHCPQL VSLVHRSLEAAQDARGHCPQLAAYVHYAFR R S L A R G 3 1 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 959.46722 Q96HP0 Q96HP0 818 826 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0031551 119.75 By MS/MS 2.5 0.5 1 1 2 445550 445550 0 12760 2193 13575 32251;32252 22763 22763 1 20331 0 SLEAEGFQVTYLPVQK ITTQTEHKCVLDSCRSLEAEGFQVTYLPVQ LEAEGFQVTYLPVQKSGIIDLKELEAAIQP R S L Q K S 1 0 0 0 0 2 2 1 0 0 2 1 0 1 1 1 1 0 1 2 0 0 16 0 1807.9356 Q9Y697 Q9Y697 165 180 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 1.1414E-07 168.76 By MS/MS 7.5 0.5 1 1 2 2764100 2764100 0 12761 2998 13576 32253;32254 22764 22764 1 60183 0 SLEAFFLYGR DKLGDHQSPATPAFKSLEAFFLYGRLYEFW TPAFKSLEAFFLYGRLYEFWWSLSRPCPNS K S L G R L 1 1 0 0 0 0 1 1 0 0 2 0 0 2 0 1 0 0 1 0 0 0 10 0 1201.6132 Q8TEQ6 Q8TEQ6 1275 1284 GEMIN5 Gem-associated protein 5 yes yes 2 0.0010075 122.52 By MS/MS 3 0 1 1 69628 69628 0 12762 2003 13577 32255 22765 22765 1 1817.6 0 SLEATLGR VNVRTTKPPKRRPLKSLEATLGRLRRATEY PKRRPLKSLEATLGRLRRATEYAPKKRIEP K S L G R L 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 8 0 845.46068 Q92665 Q92665 128 135 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.010733 118.74 By MS/MS By matching 7 0 2 1 1 11702000 11635000 67352 12763 2073 13578 32256;32257 22766 22766 1 207910 276490 SLEDALAEAQR ELEKRKDKETGGILRSLEDALAEAQRVNTK GILRSLEDALAEAQRVNTKSQSAFDLKKKN R S L Q R V 3 1 0 1 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1201.5939 O95347 O95347 298 308 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 2.6935E-16 226.09 By MS/MS By matching 3 0 2 1 1 3939200 3891200 48002 12764 385 13579 32258;32259 22767 22767 1 101580 68797 SLEDALAEAQRVNTK ELEKRKDKETGGILRSLEDALAEAQRVNTK SLEDALAEAQRVNTKSQSAFDLKKKNLACE R S L T K S 3 1 1 1 0 1 2 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 15 1 1643.8479 O95347 O95347 298 312 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0061029 145.14 By MS/MS 3 0 1 1 662290 662290 0 12765 385 13580 32260 22768 22768 1 17289 0 SLEDALR QQEKQEQVKIESLAKSLEDALRQTASVTLQ VKIESLAKSLEDALRQTASVTLQAIAAQNA K S L L R Q 1 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 802.41848 Q16891 Q16891 223 229 IMMT MICOS complex subunit MIC60 yes yes 2 0.045203 104.45 By MS/MS 4.5 0.5 1 1 2 743480 743480 0 12766 1554 13581 32261;32262 22769 22769 1 28638 0 SLEDKAAEVVK KDTEKEVDDLTAELKSLEDKAAEVVKNTNA AELKSLEDKAAEVVKNTNAAEESLPEIQKE K S L V K N 2 0 0 1 0 0 2 0 0 0 1 2 0 0 0 1 0 0 0 2 0 0 11 1 1187.6398 Q9NTJ3 Q9NTJ3 964 974 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0043496 139.15 By MS/MS 3 0 1 1 1697000 1697000 0 12767 2630 13582 32263 22770 22770 1 44300 0 SLEDLQDEYDFK RNVKDKVMCIEHEIKSLEDLQDEYDFKCKT EIKSLEDLQDEYDFKCKTLQNREHETNGVA K S L F K C 0 0 0 3 0 1 2 0 0 0 2 1 0 1 0 1 0 0 1 0 0 0 12 0 1500.662 P42224 P42224 162 173 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 2.3107E-16 215.08 By MS/MS 5 0 1 1 707350 707350 0 12768 847 13583 32264 22771 22771 1 29075 0 SLEDPFFVVR ______________________________ ______________________________ M S L V R G 0 1 0 1 0 0 1 0 0 0 1 0 0 2 1 1 0 0 0 2 0 0 10 0 1207.6237 O60499 O60499 2 11 STX10 Syntaxin-10 yes yes 2 0.0016413 109.48 By MS/MS 8 0 1 1 217580 217580 0 12769 250 13584 32265 22772 22772 1 14354 0 SLEDPFFVVRGEVQK ______________________________ SLEDPFFVVRGEVQKAVNTARGLYQRWCEL M S L Q K A 0 1 0 1 0 1 2 1 0 0 1 1 0 2 1 1 0 0 0 3 0 0 15 1 1748.9097 O60499 O60499 2 16 STX10 Syntaxin-10 yes yes 2 0.0013817 123.95 By MS/MS 8 0 1 1 172740 172740 0 12770 250 13585 32266 22773 22773 1 11396 0 SLEDPYSQQIR GIVWKTGPRTTIFVKSLEDPYSQQIRLQQQ IFVKSLEDPYSQQIRLQQQQAQQPLQQQQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 Q9NVH2 Q9NVH2 930 940 INTS7 Integrator complex subunit 7 yes yes 2 0.00035707 148.56 By MS/MS 4 0 1 1 685920 685920 0 12771 2652 13586 32267 22774 22774 1 18725 0 SLEDTKNR IELQSQLSKKAALEKSLEDTKNRYCGQLQM KKAALEKSLEDTKNRYCGQLQMIQEQISNL K S L N R Y 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 8 1 961.48287 P35527;CON__P35527 P35527 397 404 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0066058 174.52 By MS/MS By MS/MS 5.57 3.18 2 1 2 1 1 1 1 1 2 2 4 10 5216000 482310 4733700 + 12772 791 13587 32268;32269;32270;32271;32272;32273;32274;32275;32276;32277;32278;32279;32280;32281 22775;22776;22777;22778;22779;22780;22781;22782;22783 22777 9 193060 13791000 SLEDVVR GLYQYKNICQQVNIKSLEDVVRAYLKMAEE ICQQVNIKSLEDVVRAYLKMAEEKTEAAKE K S L V R A 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 816.43413 Q14152 Q14152 85 91 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.045549 104.21 By MS/MS 2.5 1.12 1 1 1 1 4 26083000 26083000 0 12773 1409 13588 32282;32283;32284;32285 22784;22785 22784 2 696200 0 SLEEAQEWLK IGMVEEVLQSSDETKSLEEAQEWLKQFIQG SDETKSLEEAQEWLKQFIQGPPEVIRALKK K S L L K Q 1 0 0 0 0 1 3 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 10 0 1231.6085 Q9NTX5 Q9NTX5 241 250 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 9.617E-05 166.07 By MS/MS 8 0 1 1 984640 984640 0 12774 2633 13589 32286 22786 22786 1 64956 0 SLEEEKAAVTEAVR ISTWQELRQLQEQIRSLEEEKAAVTEAVRA RSLEEEKAAVTEAVRALLANQDSGEVQQDP R S L V R A 3 1 0 0 0 0 4 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 14 1 1530.789 Q9NP81 Q9NP81 105 118 SARS2 Serine--tRNA ligase, mitochondrial yes yes 2 0.00011533 163.71 By MS/MS 6 0 1 1 1615000 1615000 0 12775 2576 13590 32287 22787 22787 1 12594 0 SLEEGEGPIAVIMTPTR IAFLLPMFRHIMDQRSLEEGEGPIAVIMTP EEGEGPIAVIMTPTRELALQITKECKKFSK R S L T R E 1 1 0 0 0 0 3 2 0 2 1 0 1 0 2 1 2 0 0 1 0 0 17 0 1798.9135 Q7L014 Q7L014 439 455 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 2 0.0031787 111.31 By MS/MS 3.5 0.5 1 1 2 184070 184070 0 12776 1759 13591 32288;32289 22788 22788 1 4901.3 0 SLEETIIQK TWGPTIAALSYVFDKSLEETIIQKAISGFR SYVFDKSLEETIIQKAISGFRKCAMISAHY K S L Q K A 0 0 0 0 0 1 2 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 9 0 1059.5812 Q92538 Q92538 945 953 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 2.6892E-05 175.38 By MS/MS 2.5 0.5 1 1 2 2436400 2436400 0 12777 2055 13592 32290;32291 22789;22790 22789 2 93518 0 SLEKVCADLIR AIHRIRITLTSRNVKSLEKVCADLIRGAKE RNVKSLEKVCADLIRGAKEKNLKVKGPVRM K S L I R G 1 1 0 1 1 0 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 11 1 1302.6966 P60866 P60866 31 41 RPS20 40S ribosomal protein S20 yes yes 2 0.017272 118.9 By MS/MS By matching 9.5 0.5 1 1 1 1 1034000 979960 54042 12778 1075 13593 32292;32293 22791 22791 1 1041600 582420 SLENIFAESK EVTKEMKTNAMGLIRSLENIFAESKIKSFR MGLIRSLENIFAESKIKSFRRQVQEENFEY R S L S K I 1 0 1 0 0 0 2 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 10 0 1136.5714 Q15058 Q15058 1466 1475 KIF14 Kinesin-like protein KIF14 yes yes 2 1.6207E-15 215.06 By MS/MS 3.5 0.5 1 1 2 489150 489150 0 12779 1475 13594 32294;32295 22792 22792 1 12829 0 SLEQEEETQPGR ______________________________ ______________________________ M S L G R L 0 1 0 0 0 2 4 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 12 0 1401.6372 Q6P4A7 Q6P4A7 2 13 SFXN4 Sideroflexin-4 yes yes 2 0.00033387 159.83 By MS/MS By matching 4.75 3.27 1 1 2 3 1 2953000 2906000 46996 12780 1709 13595 32296;32297;32298;32299 22793;22794;22795 22793 3 182100 400940 SLEQEEETQPGRLLGR ______________________________ LEQEEETQPGRLLGRRDAVPAFIEPNVRFW M S L G R R 0 2 0 0 0 2 4 2 0 0 3 0 0 0 1 1 1 0 0 0 0 0 16 1 1840.9279 Q6P4A7 Q6P4A7 2 17 SFXN4 Sideroflexin-4 yes yes 2 0.0092933 110.92 By MS/MS 8 0 1 1 1653700 1653700 0 12781 1709 13596 32300 22796 22796 1 109090 0 SLEQNIQLPAALLSR LAAANPAYGRYNPRRSLEQNIQLPAALLSR SLEQNIQLPAALLSRFDLLWLIQDRPDRDN R S L S R F 2 1 1 0 0 2 1 0 0 1 4 0 0 0 1 2 0 0 0 0 0 0 15 0 1651.9257 P33993 P33993 500 514 MCM7 DNA replication licensing factor MCM7 yes yes 2 2.6711E-14 202.13 By MS/MS 5 0.816 1 1 1 3 2792200 2792200 0 12782 775 13597 32301;32302;32303 22797;22798 22798 2 37878 0 SLERAEAGDNLGALVR KNIRTVVTGIEMFHKSLERAEAGDNLGALV LERAEAGDNLGALVRGLKREDLRRGLVMVK K S L V R G 3 2 1 1 0 0 2 2 0 0 3 0 0 0 0 1 0 0 0 1 0 0 16 1 1669.8747 P49411 P49411 312 327 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 1.1928E-13 198.37 By MS/MS 7.62 1.32 2 2 2 1 1 8 140200000 140200000 0 12783 918 13598 32304;32305;32306;32307;32308;32309;32310;32311 22799;22800;22801;22802 22800 4 3219500 0 SLESLDTSLFAK TLEERAQRLFSTKGKSLESLDTSLFAKNPK KGKSLESLDTSLFAKNPKSKGTKRDTERNK K S L A K N 1 0 0 1 0 0 1 0 0 0 3 1 0 1 0 3 1 0 0 0 0 0 12 0 1309.6765 Q12874 Q12874 292 303 SF3A3 Splicing factor 3A subunit 3 yes yes 2 2.5247E-33 266.03 By MS/MS 6 0.816 1 1 1 3 2702500 2702500 0 12784 1311 13599 32312;32313;32314 22803 22803 1 23859 0 SLESTTLTEK KPWHKNCFRCAKCGKSLESTTLTEKEGEIY AKCGKSLESTTLTEKEGEIYCKGCYAKNFG K S L E K E 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 3 0 0 0 0 0 10 0 1107.5659 Q16527 Q16527 152 161 CSRP2 Cysteine and glycine-rich protein 2 yes yes 2 6.6067E-07 187.22 By MS/MS 9.5 0.5 1 1 2 2218400 2218400 0 12785 1536 13600 32315;32316 22804 22804 1 1297600 0 SLETSLVPLSDPK SLMGQKGHALLIDCRSLETSLVPLSDPKLA CRSLETSLVPLSDPKLAVLITNSNVRHSLA R S L P K L 0 0 0 1 0 0 1 0 0 0 3 1 0 0 2 3 1 0 0 1 0 0 13 0 1384.745 P51570 P51570 205 217 GALK1 Galactokinase yes yes 2 0.00035609 167.18 By MS/MS 7 0 1 1 7511600 7511600 0 12786 967 13601 32317 22805 22805 1 134230 0 SLEVILR IQETQAELPRGSIPRSLEVILRAEAVESAQ LPRGSIPRSLEVILRAEAVESAQAGDKCDF R S L L R A 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 828.5069 Q14566 Q14566 223 229 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.022086 120.65 By MS/MS 4 0 1 1 1233200 1233200 0 12787 1436 13602 32318 22806 22806 1 33664 0 SLEVLVADLVNAQK KIMEEKIQISGSNYKSLEVLVADLVNAQKD KSLEVLVADLVNAQKDSMQDESSQTSLQKE K S L Q K D 2 0 1 1 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 3 0 0 14 0 1497.8403 P98170 P98170 406 419 XIAP E3 ubiquitin-protein ligase XIAP yes yes 3 0.0021606 84.753 By MS/MS 6 0 1 1 0 0 0 12788 1223 13603 32319 22807 22807 1 0 0 SLEYCSTASIDSENPPDLNK ELASLDCYNHLAEWKSLEYCSTASIDSENP STASIDSENPPDLNKIWSEPFYQETYLPYM K S L N K I 1 0 2 2 1 0 2 0 0 1 2 1 0 0 2 4 1 0 1 0 0 0 20 0 2238.9951 P78527 P78527 3010 3029 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.2396E-05 134.88 By MS/MS 2.5 0.5 1 1 2 780680 780680 0 12789 1197 13604 32320;32321 22808 22808 1 30618 0 SLEYLPLR VTKRQVILLHTELERSLEYLPLRFGVLTGL LHTELERSLEYLPLRFGVLTGLAAIASLLY R S L L R F 0 1 0 0 0 0 1 0 0 0 3 0 0 0 1 1 0 0 1 0 0 0 8 0 989.55458 Q8WVC6 Q8WVC6 199 206 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.013273 115.46 By MS/MS 9 0 1 1 985290 985290 0 12790 2028 13605 32322 22809 22809 1 565460 0 SLFSNVVTK GLHLSQKRNNGVVDKSLFSNVVTKNKDLPE NGVVDKSLFSNVVTKNKDLPESALRDLIVA K S L T K N 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 2 1 0 0 2 0 0 9 0 993.5495 P31939 P31939 398 406 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.0028193 120.99 By MS/MS 6 0 1 1 2440000 2440000 0 12791 757 13606 32323 22810 22810 1 19027 0 SLFSSIGEVESAK IVNYLPQNMTQDELRSLFSSIGEVESAKLI LRSLFSSIGEVESAKLIRDKVAGHSLGYGF R S L A K L 1 0 0 0 0 0 2 1 0 1 1 1 0 1 0 4 0 0 0 1 0 0 13 0 1352.6824 Q15717 Q15717 38 50 ELAVL1 ELAV-like protein 1 yes yes 2 1.4856E-07 182.92 By MS/MS 8 0 1 1 1674400 1674400 0 12792 1514 13607 32324 22811 22811 1 110460 0 SLGAEPLEVDLK VRGFDTRAAALEQFKSLGAEPLEVDLKESG QFKSLGAEPLEVDLKESGEGQGGYAKEMSK K S L L K E 1 0 0 1 0 0 2 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 12 0 1269.6816 Q13423 Q13423 268 279 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.0018833 141.91 By MS/MS 2 0.816 1 1 1 3 1359100 1359100 0 12793 1367 13608 32325;32326;32327 22812;22813 22812 2 60624 0 SLGAVVFSR AVLADSVHLAWDLSRSLGAVVFSRVTNNVV AWDLSRSLGAVVFSRVTNNVVLEAPFLVGI R S L S R V 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 9 0 934.52362 O43482 O43482 100 108 OIP5 Protein Mis18-beta yes yes 2 0.002454 124.92 By MS/MS 9 0 1 1 339710 339710 0 12794 203 13609 32328 22814 22814 1 194960 0 SLGEIPIVESEIK STKEDIQSVMTEIRRSLGEIPIVESEIKKE RRSLGEIPIVESEIKKEAGELKPEEEITVG R S L I K K 0 0 0 0 0 0 3 1 0 3 1 1 0 0 1 2 0 0 0 1 0 0 13 0 1412.7763 P53618 P53618 482 494 COPB1 Coatomer subunit beta yes yes 2 0.0028231 115.29 By MS/MS 4.5 0.5 1 1 2 2887300 2887300 0 12795 1004 13610 32329;32330 22815;22816 22815 2 83583 0 SLGEIPIVESEIKK STKEDIQSVMTEIRRSLGEIPIVESEIKKE RSLGEIPIVESEIKKEAGELKPEEEITVGP R S L K K E 0 0 0 0 0 0 3 1 0 3 1 2 0 0 1 2 0 0 0 1 0 0 14 1 1540.8712 P53618 P53618 482 495 COPB1 Coatomer subunit beta yes yes 2 0.00056864 142.1 By MS/MS 5 0.816 1 1 1 3 5030300 5030300 0 12796 1004 13611 32331;32332;32333 22817;22818 22817 2 136410 0 SLGEISALTSK AELCDDPKERDDILRSLGEISALTSKLADL DILRSLGEISALTSKLADLRRQGKGDSPEA R S L S K L 1 0 0 0 0 0 1 1 0 1 2 1 0 0 0 3 1 0 0 0 0 0 11 0 1104.6027 P18206 P18206 434 444 VCL Vinculin yes yes 2 0.0005888 139.15 By MS/MS 4.5 0.5 1 1 2 1208100 1208100 0 12797 623 13612 32334;32335 22819 22819 1 35416 0 SLGLLVR ELAQQVRAVAQPLGRSLGLLVRDLEGGHGM AVAQPLGRSLGLLVRDLEGGHGMRRIRLQL R S L V R D 0 1 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 1 0 0 7 0 756.48577 Q9NUL7 Q9NUL7 229 235 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.019274 128.38 By MS/MS 6 0 1 1 1843300 1843300 0 12798 2638 13613 32336 22820 22820 1 14374 0 SLGLSDEEIVK AAKAGSSKYQWGIMKSLGLSDEEIVKFSEA GIMKSLGLSDEEIVKFSEAEHWLDYFPPLA K S L V K F 0 0 0 1 0 0 2 1 0 1 2 1 0 0 0 2 0 0 0 1 0 0 11 0 1188.6238 Q9P2J5 Q9P2J5 163 173 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.0011893 131.12 By MS/MS 3 0 1 1 7409500 7409500 0 12799 2738 13614 32337 22821 22821 1 193420 0 SLGNVLDPR LHPMVRDRQGRKMSKSLGNVLDPRDIISGV GRKMSKSLGNVLDPRDIISGVEMQVLQEKL K S L P R D 0 1 1 1 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 9 0 969.52434 Q5ST30 Q5ST30 662 670 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.0047517 121.73 By MS/MS 4 0 1 1 0 0 0 12800 1619 13615 32338 22822 22822 1 0 0 SLGPPQGEEDSVPR ECMAPLTALVKHMHRSLGPPQGEEDSVPRD RSLGPPQGEEDSVPRDLPSWMKFLHGKLGN R S L P R D 0 1 0 1 0 1 2 2 0 0 1 0 0 0 3 2 0 0 0 1 0 0 14 0 1466.7001 P78527 P78527 2107 2120 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00014169 142.76 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 7644700 7576500 68249 12801 1197 13616 32339;32340;32341;32342;32343 22823;22824;22825 22824 2 352790 68249 SLGPVELLLR EGAENLRRATTDLGRSLGPVELLLRGSSRR TDLGRSLGPVELLLRGSSRRLDLLHQQLQE R S L L R G 0 1 0 0 0 0 1 1 0 0 4 0 0 0 1 1 0 0 0 1 0 0 10 0 1095.6652 Q16512 Q16512 69 78 PKN1 Serine/threonine-protein kinase N1 yes yes 2 0.00082481 125.82 By MS/MS 4 0 1 1 195580 195580 0 12802 1534 13617 32344 22826 22826 1 5339 0 SLGSSDLKF DLKEVTEEDLNNHFKSLGSSDLKF______ LNNHFKSLGSSDLKF_______________ K S L K F - 0 0 0 1 0 0 0 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 9 1 952.48656 Q6NVY1 Q6NVY1 378 386 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 0.0089986 143.73 By MS/MS 7.5 0.5 1 1 2 2206500 2206500 0 12803 1693 13618 32345;32346 22827 22827 1 52921 0 SLGTLYSQVSR WSVVEASVKPGSSTRSLGTLYSQVSRLAPL SSTRSLGTLYSQVSRLAPLSSSRSRFHAFI R S L S R L 0 1 0 0 0 1 0 1 0 0 2 0 0 0 0 3 1 0 1 1 0 0 11 0 1209.6354 Q9BVN2 Q9BVN2 575 585 RUSC1 RUN and SH3 domain-containing protein 1 yes yes 2 0.00027138 152.04 By MS/MS 6 0 1 1 995140 995140 0 12804 2381 13619 32347 22828 22828 1 7760.2 0 SLGVTQLAVAVNK FETGGQTREHGLLVRSLGVTQLAVAVNKMD VRSLGVTQLAVAVNKMDQVNWQQERFQEIT R S L N K M 2 0 1 0 0 1 0 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 13 0 1298.7558 Q9Y450 Q9Y450 395 407 HBS1L HBS1-like protein yes yes 2 3.6405E-05 163.46 By MS/MS 1 0 1 1 218850 218850 0 12805 2945 13620 32348 22829 22829 1 10693 0 SLGYAYVNFQQPADAER PILSIRVCRDMITRRSLGYAYVNFQQPADA GYAYVNFQQPADAERALDTMNFDVIKGKPV R S L E R A 3 1 1 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 2 1 0 0 17 0 1927.9064 P11940;Q13310 P11940 51 67 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein 4 no no 2 3.0823E-43 255.39 By MS/MS 5 0 1 1 2193900 2193900 0 12806 560;1353 13621 32349 22830 22830 1 90177 0 SLHDAIMIVR ILRGGAEQFMEETERSLHDAIMIVRRAIKN EETERSLHDAIMIVRRAIKNDSVVAGGGAI R S L V R R 1 1 0 1 0 0 0 0 1 2 1 0 1 0 0 1 0 0 0 1 0 0 10 0 1153.6278 Q99832 Q99832 388 397 CCT7 T-complex protein 1 subunit eta yes yes 2;3 0.00012049 163.32 By MS/MS By matching 5.17 1.86 1 5 5 1 121840000 121810000 32414 12807 2295 13622;13623 32350;32351;32352;32353;32354;32355 22831;22832;22833;22834;22835 22834 1446 5 949880 99412 SLHDALCVIR FIRGGNKMIIEEAKRSLHDALCVIRNLIRD EEAKRSLHDALCVIRNLIRDNRVVYGGGAA R S L I R N 1 1 0 1 1 0 0 0 1 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1182.6179 P48643 P48643 401 410 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.00010603 164.96 By MS/MS 5.48 2.25 2 3 3 4 5 3 3 1 1 25 446370000 446370000 0 12808 909 13624 32356;32357;32358;32359;32360;32361;32362;32363;32364;32365;32366;32367;32368;32369;32370;32371;32372;32373;32374;32375;32376;32377;32378;32379;32380 22836;22837;22838;22839;22840;22841;22842;22843;22844;22845;22846 22841 11 4094400 0 SLHDALCVLAQTVK VLRGATQQILDEAERSLHDALCVLAQTVKD RSLHDALCVLAQTVKDSRTVYGGGCSEMLM R S L V K D 2 0 0 1 1 1 0 0 1 0 3 1 0 0 0 1 1 0 0 2 0 0 14 0 1553.8236 P78371 P78371 389 402 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.00013687 155.02 By MS/MS 6 0 2 2 94670000 94670000 0 12809 1195 13625 32381;32382 22847;22848 22847 2 738240 0 SLHDALCVLAQTVKDSR VLRGATQQILDEAERSLHDALCVLAQTVKD HDALCVLAQTVKDSRTVYGGGCSEMLMAHA R S L S R T 2 1 0 2 1 1 0 0 1 0 3 1 0 0 0 2 1 0 0 2 0 0 17 1 1911.9836 P78371 P78371 389 405 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 1.5453E-09 198.29 By MS/MS 6 0 4 4 28434000 28434000 0 12810 1195 13626 32383;32384;32385;32386 22849;22850;22851;22852 22852 4 221730 0 SLHDALCVVK ILRGANDFMCDEMERSLHDALCVVKRVLES DEMERSLHDALCVVKRVLESKSVVPGGGAV R S L V K R 1 0 0 1 1 0 0 0 1 0 2 1 0 0 0 1 0 0 0 2 0 0 10 0 1140.5961 P17987 P17987 391 400 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 0.00029039 143.7 By MS/MS 4.57 2.56 2 2 2 1 1 2 2 1 1 14 78456000 78456000 0 12811 619 13627 32387;32388;32389;32390;32391;32392;32393;32394;32395;32396;32397;32398;32399;32400 22853;22854;22855;22856;22857;22858 22854 6 796950 0 SLHDALCVVKR ILRGANDFMCDEMERSLHDALCVVKRVLES EMERSLHDALCVVKRVLESKSVVPGGGAVE R S L K R V 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 1 0 0 0 2 0 0 11 1 1296.6972 P17987 P17987 391 401 TCP1 T-complex protein 1 subunit alpha yes yes 2;3;4 7.4832E-05 174.02 By MS/MS 4.89 2.18 2 2 3 2 9 124770000 124770000 0 12812 619 13628 32401;32402;32403;32404;32405;32406;32407;32408;32409 22859;22860;22861;22862;22863 22862 5 1064300 0 SLHGLEQLR GAALGVLILRGNELRSLHGLEQLRNLRHLD RGNELRSLHGLEQLRNLRHLDLAYNLLEGH R S L L R N 0 1 0 0 0 1 1 1 1 0 3 0 0 0 0 1 0 0 0 0 0 0 9 0 1051.5774 Q8N1F8 Q8N1F8 246 254 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 3 0.0023571 111.74 By MS/MS 3 0 1 1 689780 689780 0 12813 1899 13629 32410 22864 22864 1 18007 0 SLICSISNEVPEHPCVSPVSNHVYER ______________________________ EHPCVSPVSNHVYERRLIEKYIAENGTDPI M S L E R R 0 1 2 0 2 0 3 0 2 2 1 0 0 0 3 5 0 0 1 4 0 0 26 0 3008.412 Q9UMS4 Q9UMS4 2 27 PRPF19 Pre-mRNA-processing factor 19 yes yes 3 0.00014486 79.025 By MS/MS 6 0 1 1 4719600 4719600 0 12814 2834 13630 32411 22865 22865 1 36804 0 SLIEEGGDWDRR YMDNDLITRNTEKAKSLIEEGGDWDRRNRL KAKSLIEEGGDWDRRNRLKVYQGLYCVAIR K S L R R N 0 2 0 2 0 0 2 2 0 1 1 0 0 0 0 1 0 1 0 0 0 0 12 1 1431.6743 Q15008 Q15008 166 177 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2 0.020706 104.42 By MS/MS 6.5 0.5 1 1 2 10289000 10289000 0 12815 1460 13631 32412;32413 22866 22866 1 157480 0 SLIGVEYKPVSATGAEDK DIAVQELLQLKAQYKSLIGVEYKPVSATGA GVEYKPVSATGAEDKDKKKKEKENKSEKQN K S L D K D 2 0 0 1 0 0 2 2 0 1 1 2 0 0 1 2 1 0 1 2 0 0 18 1 1862.9626 P07814 P07814 944 961 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 2.5091E-33 249.36 By MS/MS 3.5 0.5 2 2 4 6468800 6468800 0 12816 493 13632 32414;32415;32416;32417 22867;22868 22868 2 169980 0 SLIGVEYKPVSATGAEDKDK DIAVQELLQLKAQYKSLIGVEYKPVSATGA EYKPVSATGAEDKDKKKKEKENKSEKQNKP K S L D K K 2 0 0 2 0 0 2 2 0 1 1 3 0 0 1 2 1 0 1 2 0 0 20 2 2106.0845 P07814 P07814 944 963 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.004481 78.552 By MS/MS 3 0 1 1 1406500 1406500 0 12817 493 13633 32418 22869 22869 1 36717 0 SLILLDECSK NSQHMFEVLAAMNHRSLILLDECSKVVLDN AMNHRSLILLDECSKVVLDNIHGCPLRIMI R S L S K V 0 0 0 1 1 0 1 0 0 1 3 1 0 0 0 2 0 0 0 0 0 0 10 0 1176.606 Q9NYY8 Q9NYY8 359 368 FASTKD2 FAST kinase domain-containing protein 2 yes yes 2 0.045647 79.986 By MS/MS 1 0 1 1 174140 174140 0 12818 2701 13634 32419 22870 22870 1 8508.1 0 SLILTALQR TRWRRLAAEQRESLKSLILTALQRETEHCV QRESLKSLILTALQRETEHCVSLSLAQLSA K S L Q R E 1 1 0 0 0 1 0 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 9 0 1013.6233 Q8TEX9 Q8TEX9 82 90 IPO4 Importin-4 yes yes 2 2.8382E-06 185.55 By MS/MS 3.5 0.5 1 1 2 1065700 1065700 0 12819 2005 13635 32420;32421 22871 22871 1 28883 0 SLIVAGLGDGSIR GADSCVTSLSCDSHRSLIVAGLGDGSIRVY HRSLIVAGLGDGSIRVYDRRMALSECRVMT R S L I R V 1 1 0 1 0 0 0 3 0 2 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1256.7089 Q8N122 Q8N122 1179 1191 RPTOR Regulatory-associated protein of mTOR yes yes 2 1.9792E-05 197.73 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 1672000 1672000 0 12820 1891 13636 32422;32423;32424;32425;32426;32427 22872 22872 1 37054 0 SLKADLQK LDVGNAEVKLEEENRSLKADLQKLKDELAS KLEEENRSLKADLQKLKDELASTKQKLEKA R S L Q K L 1 0 0 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 8 1 901.52328 P51572 P51572 183 190 BCAP31 B-cell receptor-associated protein 31 yes yes 3 0.006746 137.9 By MS/MS 8 0 1 1 1008500 1008500 0 12821 969 13637 32428 22873 22873 1 66529 0 SLKAYGELPEHAK NKADVILKYNADEARSLKAYGELPEHAKIN ARSLKAYGELPEHAKINETDTFGPGDDDEI R S L A K I 2 0 0 0 0 0 2 1 1 0 2 2 0 0 1 1 0 0 1 0 0 0 13 1 1441.7565 P47813;O14602 P47813 102 114 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 3 0.0022986 115.24 By MS/MS 9 0 1 1 1781600 1781600 0 12822 116 13638 32429 22874 22874 1 1022500 0 SLKDEDVLQK WYPARQSLRLDPKGKSLKDEDVLQKLPVGT DPKGKSLKDEDVLQKLPVGTTATLYFRDLG K S L Q K L 0 0 0 2 0 1 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 10 1 1173.6241 Q9NZ01 Q9NZ01 58 67 TECR Very-long-chain enoyl-CoA reductase yes yes 2;3 0.0008916 148.91 By MS/MS By matching 5.36 3.31 2 2 1 4 2 9 2 8781500 8690500 90986 12823 2703 13639 32430;32431;32432;32433;32434;32435;32436;32437;32438;32439;32440 22875;22876;22877;22878;22879 22877 5 563180 776220 SLKEEGVQR SKLESLCRELQRHNRSLKEEGVQRAREEEE LQRHNRSLKEEGVQRAREEEEKRKEVTSHF R S L Q R A 0 1 0 0 0 1 2 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1044.5564 P40222 P40222 254 262 TXLNA Alpha-taxilin yes yes 2 0.015604 128.6 By MS/MS By matching 5 0 2 1 1 1070800 1059200 11643 12824 827 13640 32441;32442 22880 22880 1 43536 34452 SLLAWVAAK ISQMAGCHSSIDVAKSLLAWVAAKNNGIVS SIDVAKSLLAWVAAKNNGIVSYDLLVKYLY K S L A K N 3 0 0 0 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 0 9 0 957.56475 O15091 O15091 160 168 KIAA0391 Mitochondrial ribonuclease P protein 3 yes yes 2 0.003311 119.41 By MS/MS 6 0 1 1 914380 914380 0 12825 148 13641 32443 22881 22881 1 7130.4 0 SLLDIISDPDAGTPEDK FEYEEKIMSKTTLDKSLLDIISDPDAGTPE LDIISDPDAGTPEDKMRLFLIYYISTQQAP K S L D K M 1 0 0 4 0 0 1 1 0 2 2 1 0 0 2 2 1 0 0 0 0 0 17 0 1784.868 Q8WVM8 Q8WVM8 437 453 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 6.7112E-20 213.99 By MS/MS 5 0 1 1 1122500 1122500 0 12826 2033 13642 32444 22882;22883 22882 2 46140 0 SLLDIISDPDAGTPEDKMR FEYEEKIMSKTTLDKSLLDIISDPDAGTPE IISDPDAGTPEDKMRLFLIYYISTQQAPSE K S L M R L 1 1 0 4 0 0 1 1 0 2 2 1 1 0 2 2 1 0 0 0 0 0 19 1 2072.0096 Q8WVM8 Q8WVM8 437 455 SCFD1 Sec1 family domain-containing protein 1 yes yes 3 0.015598 62.469 By MS/MS 5 0 1 1 370070 370070 0 12827 2033 13643 32445 22884 22884 1326 1 15211 0 SLLDILTDPSK IDKNEDRKKDLSKMKSLLDILTDPSKRCPL SKMKSLLDILTDPSKRCPLKTLQKCEIALE K S L S K R 0 0 0 2 0 0 0 0 0 1 3 1 0 0 1 2 1 0 0 0 0 0 11 0 1200.6602 Q96RN5 Q96RN5 568 578 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 2 0.0023474 138.22 By MS/MS 4 0 1 1 86260 86260 0 12828 2246 13644 32446 22885 22885 1 2354.8 0 SLLEGEGSSGGGGR LDIKIRLENEIQTYRSLLEGEGSSGGGGRG RSLLEGEGSSGGGGRGGGSFGGGYGGGSSG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 0 14 0 1261.5899 CON__P13645;P13645 CON__P13645 451 464 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.2827E-25 238.86 By MS/MS By MS/MS 5.35 2.92 2 2 3 2 2 1 2 2 2 2 9 11 80788000 44536000 36252000 + 12829 49 13645 32447;32448;32449;32450;32451;32452;32453;32454;32455;32456;32457;32458;32459;32460;32461;32462;32463;32464;32465;32466 22886;22887;22888;22889;22890;22891;22892;22893;22894;22895;22896;22897;22898;22899;22900;22901;22902;22903;22904;22905;22906 22902 21 11112000 125400000 SLLEIQQEEAR LSGWGNVSKPSGTTKSLLEIQQEEARQMQK GTTKSLLEIQQEEARQMQKQQQQQQQHQQP K S L A R Q 1 1 0 0 0 2 3 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 11 0 1314.6779 Q6Y7W6 Q6Y7W6 1001 1011 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 2 3.8341E-16 246.63 By MS/MS 3 0 1 1 1799400 1799400 0 12830 1736 13646 32467 22907 22907 1 46973 0 SLLEVVVLSR IPPTLAMNPQAQALRSLLEVVVLSRNSRDA AQALRSLLEVVVLSRNSRDAIAALGLLQKA R S L S R N 0 1 0 0 0 0 1 0 0 0 3 0 0 0 0 2 0 0 0 3 0 0 10 0 1113.6758 A5YKK6 A5YKK6 1641 1650 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0039552 122.96 By MS/MS 3 0 1 1 0 0 0 12831 19 13647 32468 22908 22908 1 0 0 SLLFLDNCLR KEATSIKRVRKSVDRSLLFLDNCLRLQEES KSVDRSLLFLDNCLRLQEESEVLQKSVIIG R S L L R L 0 1 1 1 1 0 0 0 0 0 4 0 0 1 0 1 0 0 0 0 0 0 10 0 1249.6489 Q9H974 Q9H974 167 176 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes yes 2 0.00083186 130.66 By MS/MS 7 0 1 1 179850 179850 0 12832 2530 13648 32469 22909 22909 1 3213.9 0 SLLINAVEASCIR ATIHALHVLESGGFRSLLINAVEASCIRTR FRSLLINAVEASCIRTRELQSMADQEQVSP R S L I R T 2 1 1 0 1 0 1 0 0 2 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1444.7708 Q96C36;P32322 P32322 252 264 PYCR2;PYCR1 Pyrroline-5-carboxylate reductase 2;Pyrroline-5-carboxylate reductase 1, mitochondrial no no 2;3 1.487E-17 218.75 By MS/MS By MS/MS 7.43 1.5 1 1 1 3 1 6 1 35736000 35628000 107830 12833 764;2136 13649 32470;32471;32472;32473;32474;32475;32476 22910;22911;22912;22913;22914 22912 5 2757300 919930 SLLLLGNER TAKSLDLTQYCFPEKSLLLLGNEREGIPAN YCFPEKSLLLLGNEREGIPANLIQQLDVCV K S L E R E 0 1 1 0 0 0 1 1 0 0 4 0 0 0 0 1 0 0 0 0 0 0 9 0 1013.5869 Q13395 Q13395 1561 1569 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.0086778 107.69 By MS/MS 3 0 1 1 514970 514970 0 12834 1362 13650 32477 22915 22915 1 13443 0 SLLNKPK ______________________________ ______________________________ M S L P K S 0 0 1 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 7 1 798.49634 P62316 P62316 2 8 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.037183 145.04 By MS/MS By matching 10 0 2 1 1 3395600 3273300 122260 12835 1130 13651 32478;32479 22916 22916 1 3479200 3135900 SLLNLLSSQEEDFNSK SVTQRTAFQIRQFQRSLLNLLSSQEEDFNS LLNLLSSQEEDFNSKEALLLVTVLTSLSKL R S L S K E 0 0 2 1 0 1 2 0 0 0 4 1 0 1 0 4 0 0 0 0 0 0 16 0 1822.8949 Q9NVI1 Q9NVI1 965 980 FANCI Fanconi anemia group I protein yes yes 2 2.3347E-10 187.63 By MS/MS 3 0 1 1 97906 97906 0 12836 2654 13652 32480 22917 22917 1 2555.8 0 SLLQALNEVK KLQGEFQLRLRQLEKSLLQALNEVKGRILD RQLEKSLLQALNEVKGRILDDDTIITTLEN K S L V K G 1 0 1 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1113.6394 Q14204 Q14204 3748 3757 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00021405 156.16 By MS/MS 3 1.41 1 1 1 1 1 5 2949600 2949600 0 12837 1421 13653 32481;32482;32483;32484;32485 22918;22919 22919 2 124470 0 SLLQAVSELEK GLPEDELADPTERFRSLLQAVSELEKKHRN ERFRSLLQAVSELEKKHRNLGLSMLLQ___ R S L E K K 1 0 0 0 0 1 2 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 11 0 1215.6711 Q5TA31 Q5TA31 213 223 RNF187 E3 ubiquitin-protein ligase RNF187 yes yes 2 0.0099944 117.14 By MS/MS 8.5 0.5 1 1 2 264880 264880 0 12838 1635 13654 32486;32487 22920 22920 1 32034 0 SLLQQLENVTK VAIFTLINEINKKGKSLLQQLENVTKERQM KKGKSLLQQLENVTKERQMKLLQQQNDITG K S L T K E 0 0 1 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 11 0 1271.7085 Q9UPN9 Q9UPN9 379 389 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 3.418E-07 189.57 By MS/MS 3.5 0.5 1 1 2 590710 590710 0 12839 2852 13655 32488;32489 22921 22921 1 15599 0 SLLSAEEAAK LSKVHFTAERSSYYKSLLSAEEAAKQKKEK SSYYKSLLSAEEAAKQKKEKVWAHYEEQPV K S L A K Q 3 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1017.5342 Q7KZF4 Q7KZF4 642 651 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 9.6016E-05 166.09 By MS/MS 4 0 1 1 1237900 1237900 0 12840 1757 13656 32490 22922 22922 1 33793 0 SLLSESNKK NEVNEREKAMENRYKSLLSESNKKLHNQEQ MENRYKSLLSESNKKLHNQEQVIKHLTEST K S L K K L 0 0 1 0 0 0 1 0 0 0 2 2 0 0 0 3 0 0 0 0 0 0 9 1 1004.5502 Q96SN8 Q96SN8 463 471 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 2 0.011103 120.46 By MS/MS 3 0 1 1 474170 474170 0 12841 2255 13657 32491 22923 22923 1 12378 0 SLLVIPNTLAVNAAQDSTDLVAK SMGSREQLAIAEFARSLLVIPNTLAVNAAQ LAVNAAQDSTDLVAKLRAFHNEAQVNPERK R S L A K L 4 0 2 2 0 1 0 0 0 1 4 1 0 0 1 2 2 0 0 3 0 0 23 0 2352.29 P17987 P17987 444 466 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 5.1022E-22 188.16 By MS/MS 4.27 1.86 1 2 1 1 1 5 11 276150000 276150000 0 12842 619 13658 32492;32493;32494;32495;32496;32497;32498;32499;32500;32501;32502 22924;22925;22926;22927;22928;22929;22930;22931;22932;22933 22930 10 2174000 0 SLLVNPEGPTLMR KEDGLAQQQTQLNLRSLLVNPEGPTLMRLN LRSLLVNPEGPTLMRLNSVQSSERPLFLVH R S L M R L 0 1 1 0 0 0 1 1 0 0 3 0 1 0 2 1 1 0 0 1 0 0 13 0 1425.765 P49327 P49327 2221 2233 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.0615E-08 190.53 By MS/MS By MS/MS 3.5 2.01 3 4 3 3 2 1 1 1 14 4 51232000 50987000 245570 12843 915 13659;13660 32503;32504;32505;32506;32507;32508;32509;32510;32511;32512;32513;32514;32515;32516;32517;32518;32519;32520 22934;22935;22936;22937;22938;22939;22940;22941;22942;22943;22944;22945;22946;22947 22941 663 14 2096400 322510 SLLVNPVLFPNR PDAKHVFTTFYAKTKSLLVNPVLFPNREDY KTKSLLVNPVLFPNREDYIHLMGYDKEEFI K S L N R E 0 1 2 0 0 0 0 0 0 0 3 0 0 1 2 1 0 0 0 2 0 0 12 0 1367.7925 Q9BUB7 Q9BUB7 218 229 TMEM70 Transmembrane protein 70, mitochondrial yes yes 2 0.0031703 115.23 By MS/MS 9.5 0.5 1 1 2 309780 309780 0 12844 2361 13661 32521;32522 22948;22949 22948 2 218070 0 SLLVPDHVITR ASTEVGEMAKQYIEKSLLVPDHVITRLMMS YIEKSLLVPDHVITRLMMSELENRRGQHWL K S L T R L 0 1 0 1 0 0 0 0 1 1 2 0 0 0 1 1 1 0 0 2 0 0 11 0 1248.719 P27144 P27144 61 71 AK4 Adenylate kinase 4, mitochondrial yes yes 3 0.018729 80.834 By MS/MS 8 0 1 1 5237100 5237100 0 12845 702 13662 32523 22950 22950 1 345490 0 SLMDQYFAR IMRTVGPRLDHERAKSLMDQYFARMCSLML DHERAKSLMDQYFARMCSLMLSKELPARIR K S L A R M 1 1 0 1 0 1 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 0 9 0 1129.5226 P78344 P78344 272 280 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.0086778 107.69 By MS/MS 4 0 1 1 741120 741120 0 12846 1192 13663 32524 22951 22951 1 20232 0 SLMIQTLEAVK FTNMMMIGGNKVLARSLMIQTLEAVKRKQF VLARSLMIQTLEAVKRKQFEKYHAASAEEQ R S L V K R 1 0 0 0 0 1 1 0 0 1 2 1 1 0 0 1 1 0 0 1 0 0 11 0 1231.6846 Q9Y2R9 Q9Y2R9 109 119 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 4.8876E-11 206.49 By MS/MS By matching 8 0 3 2 1 5003300 4968000 35328 12847 2899 13664;13665 32525;32526;32527 22952;22953 22952 1671 2 327740 301390 SLMPYFLLTQAVR EIPDRLQFRQPSLKRSLMPYFLLTQAVRTG KRSLMPYFLLTQAVRTGNLAKFNQVLDQFG R S L V R T 1 1 0 0 0 1 0 0 0 0 3 0 1 1 1 1 1 0 1 1 0 0 13 0 1537.8327 O43242 O43242 356 368 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 1.1253E-07 185.99 By MS/MS 6 0 1 1 1739400 1739400 0 12848 187 13666 32528 22954 22954 1 13564 0 SLNDITAK ASVLNPYVKRSIKVKSLNDITAKERFSPLT KRSIKVKSLNDITAKERFSPLTTNLINLLA K S L A K E 1 0 1 1 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 8 0 860.46035 P48047 P48047 91 98 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 0.0089976 122.19 By MS/MS 9 0 1 1 5823900 5823900 0 12849 900 13667 32529 22955 22955 1 3342400 0 SLNDITAKER ASVLNPYVKRSIKVKSLNDITAKERFSPLT SIKVKSLNDITAKERFSPLTTNLINLLAEN K S L E R F 1 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1145.6041 P48047 P48047 91 100 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 0.00045435 169.99 By MS/MS 9 0 1 1 2729700 2729700 0 12850 900 13668 32530 22956 22956 1 1566600 0 SLNFTEECASWR LINIQEYPIERHEERSLNFTEECASWRIPL EERSLNFTEECASWRIPLDEINIICDIATS R S L W R I 1 1 1 0 1 0 2 0 0 0 1 0 0 1 0 2 1 1 0 0 0 0 12 0 1498.6511 A3KMH1 A3KMH1 1094 1105 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.00036945 144.7 By MS/MS 3 0.816 1 1 1 3 845840 845840 0 12851 13 13669 32531;32532;32533 22957 22957 1 27596 0 SLNNQFASFIDK PEIQKVKSREREQIKSLNNQFASFIDKVRF QIKSLNNQFASFIDKVRFLEQQNQVLQTKW K S L D K V 1 0 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 0 0 0 12 0 1382.683 P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 186 197 KRT1 Keratin, type II cytoskeletal 1 no no 2 1.8494E-69 317.75 By MS/MS By MS/MS 5.21 2.54 1 1 2 2 2 2 1 1 1 1 7 7 30273000 26365000 3908300 + 12852 450;45;32 13670 32534;32535;32536;32537;32538;32539;32540;32541;32542;32543;32544;32545;32546;32547 22958;22959;22960;22961;22962;22963;22964;22965;22966;22967;22968;22969;22970;22971 22964 13 3132000 5575500 SLNPATIYPVLPK VGLIVSLLTGRMRGRSLNPATIYPVLPKLL GRSLNPATIYPVLPKLLSLLPLSCQKRLHC R S L P K L 1 0 1 0 0 0 0 0 0 1 2 1 0 0 3 1 1 0 1 1 0 0 13 0 1411.8075 Q9Y289 Q9Y289 556 568 SLC5A6 Sodium-dependent multivitamin transporter yes yes 2 0.008194 97.734 By MS/MS 3 1.41 1 1 1 1 1 5 526030 526030 0 12853 2878 13671 32548;32549;32550;32551;32552 22972 22972 1 19237 0 SLNQSLAEWK ______________________________ KNEKKSLNQSLAEWKLFIYNPTTGEFLGRT K S L W K L 1 0 1 0 0 1 1 0 0 0 2 1 0 0 0 2 0 1 0 0 0 0 10 0 1174.5982 P54709 P54709 8 17 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 2 1.3887E-15 217.66 By MS/MS 7 0 1 1 1576000 1576000 0 12854 1017 13672 32553 22973 22973 1 28164 0 SLNSFGGCLEGSR RSRGGFSSRGGFSSRSLNSFGGCLEGSRGS SRSLNSFGGCLEGSRGSTWGSGGRLGVRFG R S L S R G 0 1 1 0 1 0 1 3 0 0 2 0 0 1 0 3 0 0 0 0 0 0 13 0 1382.6249 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 40 52 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.031464 78.548 By matching By MS/MS 3.4 2.06 2 1 1 1 1 4 265180 52878 212300 + 12855 62 13673 32554;32555;32556;32557;32558 22974;22975 22975 2 2583.5 488260 SLNSIEFR LVFSRDFGLLVFVRKSLNSIEFRECREEIL LLVFVRKSLNSIEFRECREEILKFLCIFLE K S L F R E 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 2 0 0 0 0 0 0 8 0 964.49779 P78527 P78527 72 79 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0033432 146.79 By MS/MS 1.5 0.5 1 1 2 1872900 1872900 0 12856 1197 13674 32559;32560 22976;22977 22976 2 92045 0 SLPGLASSVKEPLPQAT VSLVQKIELAARRRRSLPGLASSVKEPLPQ PGLASSVKEPLPQAT_______________ R S L A T - 2 0 0 0 0 1 1 1 0 0 3 1 0 0 3 3 1 0 0 1 0 0 17 1 1693.9251 Q9NUL7 Q9NUL7 524 540 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 3.5698E-13 190.1 By MS/MS 6 0 1 1 7348400 7348400 0 12857 2638 13675 32561 22978 22978 1 57303 0 SLPGQNEDLVLTGYQVDK VRAGDNKYMHLKVFKSLPGQNEDLVLTGYQ GQNEDLVLTGYQVDKNKDDELTGF______ K S L D K N 0 0 1 2 0 2 1 2 0 0 3 1 0 0 1 1 1 0 1 2 0 0 18 0 1974.9898 P01040 P01040 72 89 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2 0.0021181 106.76 By MS/MS 1 0 1 1 192310 0 192310 12858 435 13676 32562 22979 22979 1 0 192310 SLPLVQVDEKGEK KKLSTDVDLIVEVLRSLPLVQVDEKGEKVR LRSLPLVQVDEKGEKVRPNQNRCIVILREI R S L E K V 0 0 0 1 0 1 2 1 0 0 2 2 0 0 1 1 0 0 0 2 0 0 13 1 1440.7824 Q92615 Q92615 216 228 LARP4B La-related protein 4B yes yes 2 0.029509 108.9 By MS/MS 4 0 1 1 1039100 1039100 0 12859 2067 13677 32563 22980 22980 1 28367 0 SLPSVETLGCTSVICSDK ALGTRRMAKKNAIVRSLPSVETLGCTSVIC SVETLGCTSVICSDKTGTLTTNQMSVCRMF R S L D K T 0 0 0 1 2 0 1 1 0 1 2 1 0 0 1 4 2 0 0 2 0 0 18 0 1951.9231 P16615;O14983;Q93084 P16615 335 352 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 1.1253E-25 228.93 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 6705400 6705400 0 12860 608 13678 32564;32565;32566;32567;32568;32569 22981;22982;22983;22984 22984 4 211170 0 SLPTTVPESPNYR ANKLFGAPEPSTIARSLPTTVPESPNYRNT ARSLPTTVPESPNYRNTRTPRTPRTPQLKD R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 Q6PKG0 Q6PKG0 766 778 LARP1 La-related protein 1 yes yes 2 0.019039 81.525 By MS/MS 3.5 0.5 1 1 2 893180 893180 0 12861 1719 13679 32570;32571 22985 22985 1 23666 0 SLPYLPADIGNAEGEPVVPER LLPLYFPRSLKEENRSLPYLPADIGNAEGE ADIGNAEGEPVVPERQIRISEKPGAPEDNQ R S L E R Q 2 1 1 1 0 0 3 2 0 1 2 0 0 0 4 1 0 0 1 2 0 0 21 0 2222.1219 Q9NXN4 Q9NXN4 233 253 GDAP2 Ganglioside-induced differentiation-associated protein 2 yes yes 2 1.4105E-12 162.76 By MS/MS 6 0 1 1 2894500 2894500 0 12862 2690 13680 32572 22986 22986 1 22571 0 SLQALGEVIEAELR AELGMEHQAVVGAVKSLQALGEVIEAELRS KSLQALGEVIEAELRSTKHWELTAEGEEIA K S L L R S 2 1 0 0 0 1 3 1 0 1 3 0 0 0 0 1 0 0 0 1 0 0 14 0 1526.8304 Q9Y285 Q9Y285 43 56 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 2;3 4.7362E-26 287.29 By MS/MS 6 0 2 2 5282800 5282800 0 12863 2876 13681 32573;32574 22987;22988 22987 2 41195 0 SLQAQLQR CLDRTNVIQSLLARRSLQAQLQRLGVLHVG QSLLARRSLQAQLQRLGVLHVGQKLEEQDE R S L Q R L 1 1 0 0 0 3 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 942.52468 Q9NTJ5 Q9NTJ5 407 414 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.00049162 183.74 By MS/MS 1.5 0.5 1 1 2 2080100 2080100 0 12864 2631 13682 32575;32576 22989;22990 22989 2 102130 0 SLQEMFSGTR FVWEASHYLVRQVFKSLQEMFSGTRAIQHW RQVFKSLQEMFSGTRAIQHWLTESARLISH K S L T R A 0 1 0 0 0 1 1 1 0 0 1 0 1 1 0 2 1 0 0 0 0 0 10 0 1154.539 O00411 O00411 1039 1048 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00093175 126.03 By MS/MS 3 0 2 2 1648500 1648500 0 12865 92 13683;13684 32577;32578 22991;22992 22992 65 2 43035 0 SLQERNQEQEKVER SGRAKELLGQGLLLRSLQERNQEQEKVERR RSLQERNQEQEKVERRRQVPFHLHINLELL R S L E R R 0 2 1 0 0 3 4 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 14 2 1771.8813 Q99613;B5ME19 Q99613 654 667 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.00053745 132.51 By MS/MS By matching 4 0 2 1 1 878310 835360 42951 12866 2275 13685 32579;32580 22993 22993 1 22804 89749 SLQLEAQTYQR KKYLFYFERWENHNKSLQLEAQTYQRIHEK NHNKSLQLEAQTYQRIHEKIQERVMNNLGT K S L Q R I 1 1 0 0 0 3 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 11 0 1335.6783 O95376 O95376 378 388 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 2 6.6179E-16 215.72 By MS/MS 6 0 1 1 2534600 2534600 0 12867 389 13686 32581 22994 22994 1 19765 0 SLQQLQH IQLCGLIRACAEALRSLQQLQH________ RACAEALRSLQQLQH_______________ R S L Q H - 0 0 0 0 0 3 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 852.44537 O60232 O60232 193 199 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 2 0.017924 132.09 By MS/MS By matching 9 0 2 1 1 935460 919060 16401 12868 238 13687 32582;32583 22995 22995 1 527450 176750 SLQSLLGPSSK SLSSTSGIGTSPSLRSLQSLLGPSSKFRHA PSLRSLQSLLGPSSKFRHAQGTVLHRDSHI R S L S K F 0 0 0 0 0 1 0 1 0 0 3 1 0 0 1 4 0 0 0 0 0 0 11 0 1115.6186 P57737 P57737 462 472 CORO7 Coronin-7 yes yes 2 0.0028478 116.77 By MS/MS 4 0 1 1 775410 775410 0 12869 1056 13688 32584 22996 22996 1 21168 0 SLQSVAEER GKPVHHGVNQLKFARSLQSVAEERAGRHCG QLKFARSLQSVAEERAGRHCGALRVLNSYW R S L E R A 1 1 0 0 0 1 2 0 0 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1017.5091 P61313 P61313 97 105 RPL15 60S ribosomal protein L15 yes yes 2 0.0006374 150.27 By MS/MS By matching 8.67 0.471 1 2 1 2 1655600 1498200 157360 12870 1097 13689 32585;32586;32587 22997 22997 1 859850 1478600 SLQYGEQVNEILCR ATKAQIVKALKAMTRSLQYGEQVNEILCRS RSLQYGEQVNEILCRSSVWSAFKDQKHDLF R S L C R S 0 1 1 0 1 2 2 1 0 1 2 0 0 0 0 1 0 0 1 1 0 0 14 0 1707.825 O75165 O75165 2169 2182 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0031142 102.33 By MS/MS 2 0 1 1 290230 290230 0 12871 287 13690 32588 22998 22998 1 14426 0 SLRVDIAEGR LKEALTYDGALLGDRSLRVDIAEGRKQDKG LLGDRSLRVDIAEGRKQDKGGFGFRKGGPD R S L G R K 1 2 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 10 1 1114.6095 Q15056 Q15056 110 119 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.034724 108.43 By MS/MS 8.5 0.5 1 1 2 4361200 4361200 0 12872 1474 13691 32589;32590 22999 22999 1 366110 0 SLSAERER AAVEAKVNRSTALLKSLSAERERWEKTSET RSTALLKSLSAERERWEKTSETFKNQMSTI K S L E R W 1 2 0 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 8 1 946.48321 Q14204 Q14204 3481 3488 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0085498 170.3 By MS/MS 2 0.816 1 1 1 3 1481800 1481800 0 12873 1421 13692 32591;32592;32593 23000;23001 23000 2 70664 0 SLSAIDR ITYEKCLIATGGTPRSLSAIDRAGAEVKSR IATGGTPRSLSAIDRAGAEVKSRTTLFRKI R S L D R A 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 7 0 760.40792 O95831 O95831 266 272 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.02098 123.69 By MS/MS 5.5 1.12 1 1 1 1 4 14909000 14909000 0 12874 409 13693 32594;32595;32596;32597 23002 23002 1 524750 0 SLSAIDRAGAEVK ITYEKCLIATGGTPRSLSAIDRAGAEVKSR PRSLSAIDRAGAEVKSRTTLFRKIGDFRSL R S L V K S 3 1 0 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 13 1 1315.7096 O95831 O95831 266 278 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.206E-06 181.66 By MS/MS 6.5 1.12 1 1 1 1 4 6448500 6448500 0 12875 409 13694 32598;32599;32600;32601 23003 23003 1 203360 0 SLSEAPEDTSTR GEEENGEVHQAREDKSLSEAPEDTSTRGLN EDKSLSEAPEDTSTRGLNQDSTDSKTLQEQ K S L T R G 1 1 0 1 0 0 2 0 0 0 1 0 0 0 1 3 2 0 0 0 0 0 12 0 1291.5892 P41214 P41214 237 248 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.011334 95.523 By MS/MS 5 0 1 1 720200 720200 0 12876 837 13695 32602 23004 23004 1 29603 0 SLSEEVESSESGELPEVDVK QNTIEKEEFMLKLMRSLSEEVESSESGELP VESSESGELPEVDVKSEHSGKKVQFAEALA R S L V K S 0 0 0 1 0 0 6 1 0 0 2 1 0 0 1 5 0 0 0 3 0 0 20 0 2147.9958 Q9UKA4 Q9UKA4 1169 1188 AKAP11 A-kinase anchor protein 11 yes yes 2 0.00077334 106.52 By MS/MS 2 0 1 1 239880 239880 0 12877 2809 13696 32603 23005 23005 1 11923 0 SLSIEIGHEVK ERLTESLRSKVTAIKSLSIEIGHEVKTQNK TAIKSLSIEIGHEVKTQNKLLAEMDSQFDS K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 O15155 O15155 48 58 BET1 BET1 homolog yes yes 2 0.00030165 150.81 By MS/MS 10 0 1 1 538950 538950 0 12878 154 13697 32604 23006 23006 1 572850 0 SLSLGEVLDGDR YYQLPVCCPEKIRHKSLSLGEVLDGDRMAE RHKSLSLGEVLDGDRMAESLYEIRFRENVE K S L D R M 0 1 0 2 0 0 1 2 0 0 3 0 0 0 0 2 0 0 0 1 0 0 12 0 1259.6357 O15321 O15321 76 87 TM9SF1 Transmembrane 9 superfamily member 1 yes yes 2 0.0049511 106.4 By MS/MS 1 0 1 1 81532 81532 0 12879 169 13698 32605 23007 23007 1 3983.5 0 SLSNATIINEEVLNAMLK MVLADLGRKITSALRSLSNATIINEEVLNA NATIINEEVLNAMLKEVCTALLEADVNIKL R S L L K E 2 0 3 0 0 0 2 0 0 2 3 1 1 0 0 2 1 0 0 1 0 0 18 0 1959.0347 P61011 P61011 16 33 SRP54 Signal recognition particle 54 kDa protein yes yes 2 2.2987E-19 211.82 By MS/MS 6 0 1 1 834010 834010 0 12880 1082 13699 32606 23008 23008 1 6503.7 0 SLSNKLTLDKLDVK ______________________________ MSLSNKLTLDKLDVKGKRVVMRVDFNVPMK M S L V K G 0 0 1 2 0 0 0 0 0 0 4 3 0 0 0 2 1 0 0 1 0 0 14 2 1572.9087 P00558 P00558 2 15 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.015753 72.815 By MS/MS 7.5 0.5 1 1 2 2152600 2152600 0 12881 432 13700 32607;32608 23009 23009 1 44174 0 SLSNSNPDISGTPTSPDDEVR RSAVRPASLNLNRSRSLSNSNPDISGTPTS PDISGTPTSPDDEVRSIIGSKGLDRSNSWV R S L V R S 0 1 2 3 0 0 1 1 0 1 1 0 0 0 3 5 2 0 0 1 0 0 21 0 2186.9927 Q96N67 Q96N67 896 916 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 6.8854E-13 169.94 By MS/MS 2.5 0.5 1 1 2 529510 529510 0 12882 2230 13701 32609;32610 23010 23010 1 20669 0 SLSSPTDNLELSLR IIDILSEAKRRQQGKSLSSPTDNLELSLRS KSLSSPTDNLELSLRSQSDLDDQHDYDSVA K S L L R S 0 1 1 1 0 0 1 0 0 0 4 0 0 0 1 4 1 0 0 0 0 0 14 0 1530.789 Q9Y2X7 Q9Y2X7 359 372 GIT1 ARF GTPase-activating protein GIT1 yes yes 2 0.00014116 142.83 By MS/MS 4.5 0.5 1 1 2 1030100 1030100 0 12883 2905 13702 32611;32612 23011 23011 1 31040 0 SLSSSLDDTEVK ISTTASKTETPIVSKSLSSSLDDTEVKKVM VSKSLSSSLDDTEVKKVMEECKRLQGEVQR K S L V K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 4 1 0 0 1 0 0 12 0 1279.6143 O95292 O95292 156 167 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.00044617 141.1 By MS/MS 8 0 1 1 1373300 1373300 0 12884 381 13703 32613 23012 23012 1 90599 0 SLSSSLDDTEVKK ISTTASKTETPIVSKSLSSSLDDTEVKKVM SKSLSSSLDDTEVKKVMEECKRLQGEVQRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 5.9023E-11 196.44 By MS/MS 8 0 1 1 2258400 2258400 0 12885 381 13704 32614 23013 23013 1 148990 0 SLSTEQLFR MAFQAEQKIKADILRSLSTEQLFRLLSDSD KADILRSLSTEQLFRLLSDSDLNVLMKTLG R S L F R L 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 2 1 0 0 0 0 0 9 0 1079.5611 Q8IUR7 Q8IUR7 510 518 ARMC8 Armadillo repeat-containing protein 8 yes yes 2 0.0026381 129.42 By MS/MS 5 0 1 1 845620 845620 0 12886 1854 13705 32615 23014 23014 1 34758 0 SLTAEIDRLK SECSARLLQQEEEIKSLTAEIDRLKNCGCL EEEIKSLTAEIDRLKNCGCLGASPNLEQLQ K S L L K N 1 1 0 1 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 1 1144.6452 P54136 P54136 21 30 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 1.042E-05 177.7 By MS/MS 5 0 1 1 1272500 1272500 0 12887 1013 13706 32616 23015 23015 1 52303 0 SLTANPELIDR IEEGIPAFTCEEYVKSLTANPELIDRLACL EYVKSLTANPELIDRLACLSEEGNEIESGK K S L D R L 1 1 1 1 0 0 1 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 11 0 1227.6459 Q9Y2L1 Q9Y2L1 200 210 DIS3 Exosome complex exonuclease RRP44 yes yes 2 1.9292E-16 235.01 By MS/MS 2.5 1.12 1 1 1 1 4 9700800 9700800 0 12888 2892 13707 32617;32618;32619;32620 23016;23017 23017 2 274820 0 SLTDSCLFEK DAKEELTASLVGLPKSLTDSCLFEKSGYEE VGLPKSLTDSCLFEKSGYEEDNECHVTPEL K S L E K S 0 0 0 1 1 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1198.554 Q9UKA4 Q9UKA4 1483 1492 AKAP11 A-kinase anchor protein 11 yes yes 2 0.053059 78.264 By MS/MS 1.5 0.5 1 1 2 145000 145000 0 12889 2809 13708 32621;32622 23018 23018 1 7185.3 0 SLTEYLQNVEQK AACQLRISQHEAKIKSLTEYLQNVEQKKRQ KIKSLTEYLQNVEQKKRQLEESVDALSEEL K S L Q K K 0 0 1 0 0 2 2 0 0 0 2 1 0 0 0 1 1 0 1 1 0 0 12 0 1450.7304 P33176 P33176 645 656 KIF5B Kinesin-1 heavy chain yes yes 2 4.4578E-56 294.24 By MS/MS 4 0 1 1 2330700 2330700 0 12890 767 13709 32623 23019 23019 1 63626 0 SLTINGVADDDALAEER NGQERVEVEEDGQLKSLTINGVADDDALAE TINGVADDDALAEERMRRGQNALPAQPAGL K S L E R M 3 1 1 3 0 0 2 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 17 0 1787.8537 O75190 O75190 226 242 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 2 1.5672E-10 166.79 By MS/MS 7.5 0.5 1 1 2 1604700 1604700 0 12891 291 13710 32624;32625 23020 23020 1 33138 0 SLTNDWEDHLAVK NPDDITQEEYGEFYKSLTNDWEDHLAVKHF YKSLTNDWEDHLAVKHFSVEGQLEFRALLF K S L V K H 1 0 1 2 0 0 1 0 1 0 2 1 0 0 0 1 1 1 0 1 0 0 13 0 1526.7365 P07900;P08238 P08238 307 319 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2;3 3.3865E-25 275.48 By MS/MS 4.88 0.781 3 3 2 8 67460000 67460000 0 12892 501;494 13711 32626;32627;32628;32629;32630;32631;32632;32633 23021;23022;23023;23024;23025;23026;23027 23023 7 1890600 0 SLVALLVETQMK TKAKHLAAVEERKIKSLVALLVETQMKKLE KIKSLVALLVETQMKKLEIKLRHFEELETI K S L M K K 1 0 0 0 0 1 1 0 0 0 3 1 1 0 0 1 1 0 0 2 0 0 12 0 1330.753 Q8TAQ2;Q92922 Q92922 894 905 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 2 2.8977E-07 183.03 By MS/MS 3.5 0.5 1 1 2 422050 422050 0 12893 2090;1983 13712 32634;32635 23028 23028 1307 1 11060 0 SLVASLAEPDFVVTDFAK GIVSQVKVPKKISFKSLVASLAEPDFVVTD ASLAEPDFVVTDFAKFSRPAQLHIGFQALH K S L A K F 3 0 0 2 0 0 1 0 0 0 2 1 0 2 1 2 1 0 0 3 0 0 18 0 1907.988 P22314 P22314 305 322 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 0.0059474 124.48 By MS/MS 4 0 1 1 202210 202210 0 12894 658 13713 32636 23029 23029 1 5520 0 SLVDLTAVDVPTR PVLTFLRDHTNAQFKSLVDLTAVDVPTRQN FKSLVDLTAVDVPTRQNRFEIVYNLLSLRF K S L T R Q 1 1 0 2 0 0 0 0 0 0 2 0 0 0 1 1 2 0 0 3 0 0 13 0 1384.7562 O75489 O75489 110 122 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.0005837 136.5 By MS/MS 9.5 0.5 1 1 2 382930 382930 0 12895 313 13714 32637;32638 23030 23030 1 252260 0 SLVDLTAVDVPTRQNR PVLTFLRDHTNAQFKSLVDLTAVDVPTRQN LVDLTAVDVPTRQNRFEIVYNLLSLRFNSR K S L N R F 1 2 1 2 0 1 0 0 0 0 2 0 0 0 1 1 2 0 0 3 0 0 16 1 1782.9588 O75489 O75489 110 125 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 3 0.035269 79.614 By MS/MS 8 0 1 1 974900 974900 0 12896 313 13715 32639 23031 23031 1 64314 0 SLVEEALKK ANILNSEDLYVQDLKSLVEEALKKSQLPTI YVQDLKSLVEEALKKSQLPTIMDFKKFSRS K S L K K S 1 0 0 0 0 0 2 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 9 1 1015.5914 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 610 618 yes yes 2 0.025222 112.41 By MS/MS 1 0 1 1 230890 230890 0 + 12897 31 13716 32640 23032 23032 1 11281 0 SLVEIADTVPK AVNDSCYQNDDSVLKSLVEIADTVPKYLRP SVLKSLVEIADTVPKYLRPHLEATLQLSLK K S L P K Y 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 1 1 0 0 2 0 0 11 0 1170.6496 O00410 O00410 239 249 IPO5 Importin-5 yes yes 2 0.0010316 133.23 By MS/MS 4 0 1 1 8916700 8916700 0 12898 91 13717 32641 23033;23034 23033 2 243420 0 SLVEIIEHGLVDEQQK QIAILMGCAILPHLRSLVEIIEHGLVDEQQ LVEIIEHGLVDEQQKVRTISALAIAALAEA R S L Q K V 0 0 0 1 0 2 3 1 1 2 2 1 0 0 0 1 0 0 0 2 0 0 16 0 1835.9629 O75533 O75533 685 700 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.007892 83.692 By MS/MS 3.5 0.5 1 1 2 120270 120270 0 12899 315 13718 32642;32643 23035 23035 1 3175.6 0 SLVGATYVER VPAKEFPKLSCGEWKSLVGATYVERAQILL CGEWKSLVGATYVERAQILLERCIHPADIP K S L E R A 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 1 2 0 0 10 0 1093.5768 Q8IYQ7 Q8IYQ7 282 291 THNSL1 Threonine synthase-like 1 yes yes 2 7.7121E-07 185.81 By MS/MS 5.5 0.5 1 1 2 2490100 2490100 0 12900 1882 13719 32644;32645 23036 23036 1 80063 0 SLVGLGGTK GGGGGGFGGGGFGSRSLVGLGGTKSISISV GGFGSRSLVGLGGTKSISISVAGGGGGFGA R S L T K S 0 0 0 0 0 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 830.48617 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 62 70 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0078781 109.44 By MS/MS By MS/MS 4.47 2.45 2 2 2 2 2 1 2 1 1 9 6 39021000 26174000 12847000 + 12901 52 13720 32646;32647;32648;32649;32650;32651;32652;32653;32654;32655;32656;32657;32658;32659;32660 23037;23038;23039;23040;23041;23042;23043;23044 23043 8 5108000 27028000 SLVIPEKFQHILR ______________________________ ______________________________ M S L L R V 0 1 0 0 0 1 1 0 1 2 2 1 0 1 1 1 0 0 0 1 0 0 13 1 1578.9246 P62269 P62269 2 14 RPS18 40S ribosomal protein S18 yes yes 3 0.050037 42.031 By MS/MS 9.5 0.5 1 1 2 84202 84202 0 12902 1124 13721 32661;32662 23045 23045 1 68064 0 SLVLNDLLICCR ______________________________ ______________________________ M S L C R Q 0 1 1 1 2 0 0 0 0 1 4 0 0 0 0 1 0 0 0 1 0 0 12 0 1474.7636 Q13315 Q13315 2 13 ATM Serine-protein kinase ATM yes yes 2 0.033539 63.32 By MS/MS 2 0 1 1 40423 40423 0 12903 1354 13722 32663 23046 23046 1 2009.3 0 SLVNIVK IGDLACANIQHLSSRSLVNIVKMFRFTHVD NIQHLSSRSLVNIVKMFRFTHVDHINFMKQ R S L V K M 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 0 7 0 771.48544 Q7L8L6 Q7L8L6 355 361 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.013234 145.04 By MS/MS 5 0 1 1 5704700 5704700 0 12904 1770 13723 32664 23047 23047 1 234490 0 SLVNLGGSKSISISVAR GGGGSFGAGGGFGSRSLVNLGGSKSISISV VNLGGSKSISISVARGGGRGSGFGGGYGGG R S L A R G 1 1 1 0 0 0 0 2 0 2 2 1 0 0 0 5 0 0 0 2 0 0 17 1 1686.9628 P04264;CON__P04264 P04264 66 82 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 7.4629E-07 144.33 By MS/MS 1.75 0.829 2 1 1 4 1345500 0 1345500 + 12905 450;45 13724 32665;32666;32667;32668 23048;23049 23048 2 0 1377000 SLVQEMVGSFGK INVDDFKIIYIAPMRSLVQEMVGSFGKRLA PMRSLVQEMVGSFGKRLATYGITVAELTGD R S L G K R 0 0 0 0 0 1 1 2 0 0 1 1 1 1 0 2 0 0 0 2 0 0 12 0 1280.6435 O75643 O75643 546 557 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.2309E-07 190.26 By MS/MS 1.5 0.5 1 1 2 639160 639160 0 12906 322 13725 32669;32670 23050;23051 23050 182 2 31518 0 SLYDEVAAQGEVVR QNISSNSSASILESKSLYDEVAAQGEVVRK KSLYDEVAAQGEVVRKLKAEKSPKAKINEA K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 P07814 P07814 825 838 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 3.574E-18 225.15 By MS/MS 3 0.707 1 2 1 4 12278000 12278000 0 12907 493 13726 32671;32672;32673;32674 23052;23053;23054;23055 23055 4 326620 0 SLYDEVAAQGEVVRK QNISSNSSASILESKSLYDEVAAQGEVVRK SLYDEVAAQGEVVRKLKAEKSPKAKINEAV K S L R K L 2 1 0 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 3 0 0 15 1 1662.8577 P07814 P07814 825 839 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 1.2717E-09 196.38 By MS/MS 2.5 1.12 1 1 1 1 4 4753600 4753600 0 12908 493 13727 32675;32676;32677;32678 23056 23056 1 130000 0 SLYNLGGSK VSLAGACGVGGYGSRSLYNLGGSKRISIST GGYGSRSLYNLGGSKRISISTSGGSFRNRF R S L S K R 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 9 0 937.4869 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 64 72 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.037433 86.882 By MS/MS By matching 4.33 0.471 2 1 2 1 1350200 1276700 73482 + 12909 50;61 13728 32679;32680;32681 23057 23057 1 48984 153550 SLYPSLEDLK ______________________________ ______________________________ M S L L K V 0 0 0 1 0 0 1 0 0 0 3 1 0 0 1 2 0 0 1 0 0 0 10 0 1163.6074 O00560 O00560 2 11 SDCBP Syntenin-1 yes yes 2 0.041742 64.711 By MS/MS 8 0 1 1 211370 211370 0 12910 103 13729 32682 23058 23058 1 13944 0 SLYPSLEDLKVDK ______________________________ ______________________________ M S L D K V 0 0 0 2 0 0 1 0 0 0 3 2 0 0 1 2 0 0 1 1 0 0 13 1 1505.7977 O00560 O00560 2 14 SDCBP Syntenin-1 yes yes 2 0.0043526 124.6 By MS/MS 8 0 1 1 3057200 3057200 0 12911 103 13730 32683 23059 23059 1 201680 0 SLYQSAGVAPESFEYIEAHGTGTK GVTFPSGDIQEQLIRSLYQSAGVAPESFEY PESFEYIEAHGTGTKVGDPQELNGITRALC R S L T K V 3 0 0 0 0 1 3 3 1 1 1 1 0 1 1 3 2 0 2 1 0 0 24 0 2541.2023 P49327 P49327 275 298 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 3.4279E-06 102.43 By MS/MS 2.5 1.12 1 1 1 1 4 5654900 5654900 0 12912 915 13731 32684;32685;32686;32687 23060;23061;23062 23062 3 187010 0 SLYSDHELR QEEMASLLQQIEIERSLYSDHELRALDENQ QIEIERSLYSDHELRALDENQRLAKKKADL R S L L R A 0 1 0 1 0 0 1 0 1 0 2 0 0 0 0 2 0 0 1 0 0 0 9 0 1118.5356 Q9H2W6 Q9H2W6 82 90 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 0.0069049 114.89 By MS/MS 8 0 1 1 0 0 0 12913 2485 13732 32688 23063 23063 1 0 0 SLYSEKEVFIR EFQAETKKLLDIVARSLYSEKEVFIRELIS IVARSLYSEKEVFIRELISNASDALEKLRH R S L I R E 0 1 0 0 0 0 2 0 0 1 1 1 0 1 0 2 0 0 1 1 0 0 11 1 1369.7242 Q12931 Q12931 104 114 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 0.00085507 152.04 By MS/MS 5.33 0.471 2 1 3 14785000 14785000 0 12914 1316 13733 32689;32690;32691 23064;23065 23064 2 586790 0 SMAASGNLGHTPFVDEL ADIINAAKKFVSGQKSMAASGNLGHTPFVD AASGNLGHTPFVDEL_______________ K S M E L - 2 0 1 1 0 0 1 2 1 0 2 0 1 1 1 2 1 0 0 1 0 0 17 0 1744.809 P22695 P22695 437 453 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 1.7431E-18 208.82 By MS/MS 7.33 0.471 2 1 3 9556900 9556900 0 12915 662 13734;13735 32692;32693;32694 23066;23067 23067 446 2 174700 0 SMANPPAAVK NAVKSIKKQHLVEVRSMANPPAAVKLALES LVEVRSMANPPAAVKLALESICLLLGESTT R S M V K L 3 0 1 0 0 0 0 0 0 0 0 1 1 0 2 1 0 0 0 1 0 0 10 0 984.50625 Q14204 Q14204 3309 3318 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.010093 101.64 By MS/MS 1.33 0.471 2 1 3 237690 237690 0 12916 1421 13736;13737 32695;32696;32697 23068;23069 23069 1116 2 11689 0 SMEEDPQTSR GCLKGLSSLLCNFTKSMEEDPQTSREIFNF CNFTKSMEEDPQTSREIFNFVLKAIRPQID K S M S R E 0 1 0 1 0 1 2 0 0 0 0 0 1 0 1 2 1 0 0 0 0 0 10 0 1178.4874 P78527 P78527 237 246 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00011465 157.99 By MS/MS 1.5 0.5 2 2 4 1779100 1779100 0 12917 1197 13738;13739 32698;32699;32700;32701 23070;23071;23072;23073 23070 977 4 87625 0 SMEVSTQLAR DKAFKHVFGKTLICRSMEVSTQLARAFTMD TLICRSMEVSTQLARAFTMDCITLEGDQVS R S M A R A 1 1 0 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 1 0 0 10 0 1120.5547 Q9UQE7 Q9UQE7 635 644 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.000694 137.05 By MS/MS 3 0.707 1 2 1 4 1052200 1052200 0 12918 2860 13740;13741 32702;32703;32704;32705 23074;23075 23075 1650 2 29091 0 SMFAGVPTMR GGLLLLLAESRSEGKSMFAGVPTMRESSPK RSEGKSMFAGVPTMRESSPKQYMQLGGRVL K S M M R E 1 1 0 0 0 0 0 1 0 0 0 0 2 1 1 1 1 0 0 1 0 0 10 0 1095.5205 O15260 O15260 140 149 SURF4 Surfeit locus protein 4 yes yes 2 0.0015562 102.62 By MS/MS 1.8 0.748 2 2 1 5 3267700 3267700 0 12919 164 13742;13743 32706;32707;32708;32709;32710 23076;23077;23078 23077 100;101 3 155120 0 SMGFIGHYLDQK YIDIGALNGIFVLGRSMGFIGHYLDQKRLK LGRSMGFIGHYLDQKRLKQGLYRHPWDDIS R S M Q K R 0 0 0 1 0 1 0 2 1 1 1 1 1 1 0 1 0 0 1 0 0 0 12 0 1394.6653 P53396 P53396 1066 1077 ACLY ATP-citrate synthase yes yes 2;3 0.00027405 143.24 By MS/MS 3.33 0.745 1 2 3 6 6856400 6856400 0 12920 1001 13744;13745 32711;32712;32713;32714;32715;32716 23079;23080;23081 23080 765 3 189270 0 SMIEQLIK FYSVVVSTVSGNELKSMIEQLIKTTKDNHS VSGNELKSMIEQLIKTTKDNHSPEIQHGSL K S M I K T 0 0 0 0 0 1 1 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 8 0 960.5314 Q5VYK3 Q5VYK3 731 738 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0066277 131.03 By MS/MS 3.5 0.5 1 1 2 505700 505700 0 12921 1657 13746 32717;32718 23082 23082 1 13356 0 SMLDQLGVPLYAVVK CFLCREEAADLSSLKSMLDQLGVPLYAVVK SMLDQLGVPLYAVVKEHIRTEVKDFQPYFK K S M V K E 1 0 0 1 0 1 0 1 0 0 3 1 1 0 1 1 0 0 1 3 0 0 15 0 1631.8957 Q9BRX8 Q9BRX8 100 114 FAM213A Redox-regulatory protein FAM213A yes yes 2 1.2492E-05 139.76 By MS/MS 9 0 1 1 139250 139250 0 12922 2333 13747 32719 23083 23083 1463 1 79914 0 SMSIDDTPR DGNSYQDDQDDLKRRSMSIDDTPRGSWACS DDLKRRSMSIDDTPRGSWACSIFDLKNSLP R S M P R G 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 9 0 1020.4546 Q96N67 Q96N67 180 188 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.01028 104.2 By MS/MS 2 0 1 1 199900 199900 0 12923 2230 13748 32720 23084 23084 1 9936.3 0 SMSVYCTPNKPSR LMKKEFTLEFSRDRKSMSVYCTPNKPSRTS RKSMSVYCTPNKPSRTSMSKMFVKGAPEGV K S M S R T 0 1 1 0 1 0 0 0 0 0 0 1 1 0 2 3 1 0 1 1 0 0 13 1 1525.7017 P16615 P16615 493 505 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 3 0.0057905 91.202 By MS/MS 2.5 1.12 1 1 1 1 4 2893700 2893700 0 12924 608 13749 32721;32722;32723;32724 23085;23086;23087;23088 23087 398 4 131890 0 SMVPVQVQLDVPVVK RDNNGVIGLLEPMKKSMVPVQVQLDVPVVK SMVPVQVQLDVPVVKVASGNDHLVMLTADG K S M V K V 0 0 0 1 0 2 0 0 0 0 1 1 1 0 2 1 0 0 0 6 0 0 15 0 1636.9222 P18754 P18754 162 176 RCC1 Regulator of chromosome condensation yes yes 2 3.4027E-10 187.74 By MS/MS 7 0 1 1 2824800 2824800 0 12925 625 13750 32725 23089 23089 416 1 50479 0 SNAAGVPCDLVTGEER YCGPLKLLAHEIFEKSNAAGVPCDLVTGEE NAAGVPCDLVTGEERVTVQPNGKQASHVSC K S N E R V 2 1 1 1 1 0 2 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 16 0 1673.7679 Q8IYB8 Q8IYB8 244 259 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 2.9116E-06 145.61 By MS/MS 5 0 1 1 1883400 1883400 0 12926 1879 13751 32726 23090 23090 1 77414 0 SNADYQYQLLR TEFPGVVARPIGEFRSNADYQYQLLRCNVD GEFRSNADYQYQLLRCNVDLLKIIQLGLTF R S N L R C 1 1 1 1 0 2 0 0 0 0 2 0 0 0 0 1 0 0 2 0 0 0 11 0 1369.6626 Q9UIV1 Q9UIV1 56 66 CNOT7 CCR4-NOT transcription complex subunit 7 yes yes 2 0.0045003 109.83 By MS/MS 8 0 1 1 731720 731720 0 12927 2793 13752 32727 23091 23091 1 48271 0 SNCKPSTFAYPAPLEVPK IGLNKDLKMPKVQYKSNCKPSTFAYPAPLE KPSTFAYPAPLEVPKEKEKEKVSTAVLSIT K S N P K E 2 0 1 0 1 0 1 0 0 0 1 2 0 1 4 2 1 0 1 1 0 0 18 1 2004.9979 Q99460 Q99460 804 821 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.013641 68.129 By MS/MS 4 0 1 1 1620800 1620800 0 12928 2268 13753 32728 23092 23092 1 44246 0 SNDEEAFTFAR IPTVLDRTVVDKWFKSNDEEAFTFARMLIA KWFKSNDEEAFTFARMLIAQEGLLCGGSAG K S N A R M 2 1 1 1 0 0 2 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 11 0 1285.5575 P0DN79;P35520 P0DN79 326 336 CBS Cystathionine beta-synthase yes no 2 5.9841E-22 236.92 By MS/MS 6.5 1.12 1 1 1 1 4 11363000 11363000 0 12929 530 13754 32729;32730;32731;32732 23093;23094 23093 2 179430 0 SNEILTAIIQGMR GYICQDIDPEQLQDKSNEILTAIIQGMRKE DKSNEILTAIIQGMRKEEPSNNVKLAATNA K S N M R K 1 1 1 0 0 1 1 1 0 3 1 0 1 0 0 1 1 0 0 0 0 0 13 0 1444.7708 Q14974 Q14974 170 182 KPNB1 Importin subunit beta-1 yes yes 2;3 1.4877E-07 177.04 By MS/MS 4.33 0.471 2 1 3 1403100 1403100 0 12930 1452 13755 32733;32734;32735 23095;23096 23095 1141 2 39609 0 SNELWTEIK RTAHSLFKRYRHEFKSNELWTEIKLVLDAF YRHEFKSNELWTEIKLVLDAFALPLTNLFK K S N I K L 0 0 1 0 0 0 2 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 9 0 1118.5608 P55060 P55060 166 174 CSE1L Exportin-2 yes yes 2 9.9224E-07 192.26 By MS/MS 4 0 1 1 1784700 1784700 0 12931 1025 13756 32736 23097 23097 1 48721 0 SNFGYNIPLK RSLADIAREEASNFRSNFGYNIPLKHLADR ASNFRSNFGYNIPLKHLADRVAMYVHAYTL R S N L K H 0 0 2 0 0 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 0 10 0 1151.5975 P25788 P25788 101 110 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.000443 147.2 By MS/MS 9 0.816 1 1 1 3 4233500 4233500 0 12932 690 13757 32737;32738;32739 23098;23099 23099 2 378350 0 SNFSNSADDIK ENNKPREKSESNKRKSNFSNSADDIKSKKK NKRKSNFSNSADDIKSKKKREQSNDIARGF K S N I K S 1 0 2 2 0 0 0 0 0 1 0 1 0 1 0 3 0 0 0 0 0 0 11 0 1196.5309 P45973 P45973 92 102 CBX5 Chromobox protein homolog 5 yes yes 2 0.0048618 108.31 By MS/MS 9.5 0.5 1 1 2 579560 579560 0 12933 872 13758 32740;32741 23100 23100 1 353440 0 SNGVQLLQR VVLAREDAGAEKIFRSNGVQLLQRLLDMGE AEKIFRSNGVQLLQRLLDMGETDLMLAALR R S N Q R L 0 1 1 0 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1013.5618 Q9H3U1 Q9H3U1 194 202 UNC45A Protein unc-45 homolog A yes yes 2 0.00046591 154.12 By MS/MS 4 0 1 1 743410 743410 0 12934 2493 13759 32742 23101 23101 1 20294 0 SNILLLGPTGSGK GEVLDSSHDDIKLEKSNILLLGPTGSGKTL EKSNILLLGPTGSGKTLLAQTLAKCLDVPF K S N G K T 0 0 1 0 0 0 0 3 0 1 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1255.7136 O76031 O76031 287 299 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 2.8302E-05 166.45 By MS/MS By matching 5.67 0.471 1 2 2 1 14487000 14392000 94532 12935 344 13760 32743;32744;32745 23102;23103;23104 23104 3 309920 289920 SNIWVAGDAACFYDIK SDFGGFRVNAELQARSNIWVAGDAACFYDI NIWVAGDAACFYDIKLGRRRVEHHDHAVVS R S N I K L 3 0 1 2 1 0 0 1 0 2 0 1 0 1 0 1 0 1 1 1 0 0 16 0 1828.8454 O95831 O95831 431 446 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.0822E-20 215.87 By MS/MS 5.5 0.5 1 1 2 2880200 2880200 0 12936 409 13761 32746;32747 23105 23105 1 23978 0 SNKEIMEHIR YLDSGEQVLVDVETKSNKEIMEHIRKILGK DVETKSNKEIMEHIRKILGKNEETLREEEE K S N I R K 0 1 1 0 0 0 2 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 10 1 1255.6343 P82663 P82663 94 103 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 3 0.00026274 145.28 By MS/MS 9 0 1 1 784190 784190 0 12937 1202 13762 32748 23106 23106 1 450050 0 SNKQNLFLGSLTSR RLEQEEQQRLAELSKSNKQNLFLGSLTSRL KSNKQNLFLGSLTSRLWPRSKQP_______ K S N S R L 0 1 2 0 0 1 0 1 0 0 3 1 0 1 0 3 1 0 0 0 0 0 14 1 1563.8369 Q3ZCQ8 Q3ZCQ8 332 345 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 3 0.00013961 118.08 By MS/MS 7.5 0.5 1 1 2 1405000 1405000 0 12938 1573 13763 32749;32750 23107;23108 23108 2 25108 0 SNLDITVGSR LTASQLVPPDNQDTRSNLDITVGSRQQATQ NQDTRSNLDITVGSRQQATQGWINTYPLSS R S N S R Q 0 1 1 1 0 0 0 1 0 1 1 0 0 0 0 2 1 0 0 1 0 0 10 0 1060.5513 P42356 P42356 1436 1445 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0041972 110.08 By MS/MS 2 0 1 1 299950 299950 0 12939 850 13764 32751 23109 23109 1 14909 0 SNLQVSNEPGNR YLKTRSPVTFLSDLRSNLQVSNEPGNRYNL DLRSNLQVSNEPGNRYNLQLINALVLYVGT R S N N R Y 0 1 3 0 0 1 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 12 0 1313.6324 A5YKK6 A5YKK6 2198 2209 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0014598 128.08 By MS/MS 2 0 1 1 247490 247490 0 12940 19 13765 32752 23110 23110 1 12301 0 SNLVDNTNQVEVLQR KEDRAAQSLLNKLIRSNLVDNTNQVEVLQR SNLVDNTNQVEVLQRDPNSPLYSVKSFEEL R S N Q R D 0 1 3 1 0 2 1 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 15 0 1727.8802 Q9NUU7 Q9NUU7 67 81 DDX19A ATP-dependent RNA helicase DDX19A no no 2 6.9367E-15 211.22 By MS/MS 3 2.16 1 1 1 3 4487400 4487400 0 12941 2643 13766 32753;32754;32755 23111;23112 23111 2 47764 0 SNLYIAESTSGR EAQDMAVRDHNVEFRSNLYIAESTSGRGQC EFRSNLYIAESTSGRGQCLKRIRYHGRGRF R S N G R G 1 1 1 0 0 0 1 1 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1296.631 Q9NWU5 Q9NWU5 132 143 MRPL22 39S ribosomal protein L22, mitochondrial yes yes 2 6.6638E-08 193.62 By MS/MS 9 0 1 1 4472700 4472700 0 12942 2670 13767 32756 23113 23113 1 2566900 0 SNMGHPEPASGLAALAK LCATRQEPLLIGSTKSNMGHPEPASGLAAL MGHPEPASGLAALAKVLLSLEHGLWAPNLH K S N A K V 4 0 1 0 0 0 1 2 1 0 2 1 1 0 2 2 0 0 0 0 0 0 17 0 1649.8195 P49327 P49327 327 343 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 8.8106E-05 133.96 By MS/MS 2.5 1.02 2 3 3 2 10 5234200 5234200 0 12943 915 13768;13769 32757;32758;32759;32760;32761;32762;32763;32764;32765;32766 23114;23115;23116;23117;23118;23119;23120;23121;23122;23123 23114 664 10 212280 0 SNNIINETTTR KDKEKVEEFKSIPAKSNNIINETTTRNNAL IPAKSNNIINETTTRNNALEKEKEKEEKKL K S N T R N 0 1 3 0 0 0 1 0 0 2 0 0 0 0 0 1 3 0 0 0 0 0 11 0 1261.6262 Q9NTJ3 Q9NTJ3 435 445 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.00011964 185.99 By MS/MS By matching 2.75 1.09 1 2 1 3 1 3919000 3887500 31511 12944 2630 13770 32767;32768;32769;32770 23124;23125 23125 2 106900 45161 SNNKENITIVDISR ______________________________ KSNNKENITIVDISRKINQLPEAERNLLEN K S N S R K 0 1 3 1 0 0 1 0 0 3 0 1 0 0 0 2 1 0 0 1 0 0 14 1 1601.8373 Q9H061 Q9H061 6 19 TMEM126A Transmembrane protein 126A yes yes 2;3 6.8191E-05 169.09 By MS/MS 8.6 1.02 1 1 2 1 5 3771900 3771900 0 12945 2447 13771 32771;32772;32773;32774;32775 23126;23127 23127 2 1745000 0 SNNPEDGVQAPSSTAVFR IAVERLQRSGGQVSKSNNPEDGVQAPSSTA PEDGVQAPSSTAVFRASETSAFSRPVLSHQ K S N F R A 2 1 2 1 0 1 1 1 0 0 0 0 0 1 2 3 1 0 0 2 0 0 18 0 1874.8759 Q96AY4 Q96AY4 2190 2207 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 1.0443E-10 164.93 By MS/MS 2 0 1 1 230110 230110 0 12946 2125 13772 32776 23128 23128 1 11438 0 SNNYVQEPECR TASNGGVIEELSCVRSNNYVQEPECRRNLV SCVRSNNYVQEPECRRNLVQCLLEKQGTPV R S N C R R 0 1 2 0 1 1 2 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1394.5885 Q7Z6M4 Q7Z6M4 60 70 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 0.0012419 130.41 By MS/MS 7 0 1 1 261660 261660 0 12947 1802 13773 32777 23129 23129 1 4676 0 SNPDQPAVILLLR GRISEAETLCTKNLKSNPDQPAVILLLRQV LKSNPDQPAVILLLRQVQCKPLLESQKPLP K S N L R Q 1 1 1 1 0 1 0 0 0 1 3 0 0 0 2 1 0 0 0 1 0 0 13 0 1434.8195 Q6PGP7 Q6PGP7 1355 1367 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 6.6999E-06 174.4 By MS/MS 4 0.816 1 1 1 3 2790400 2790400 0 12948 1714 13774 32778;32779;32780 23130 23130 1 74698 0 SNPEDQILYQTER VGRASDYGMKLPILRSNPEDQILYQTERYN LRSNPEDQILYQTERYNEETFGYEVPIKEE R S N E R Y 0 1 1 1 0 2 2 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 13 0 1591.7478 Q14165 Q14165 91 103 MLEC Malectin yes yes 2 8.7618E-35 260.22 By MS/MS 8 0 1 1 3101200 3101200 0 12949 1413 13775 32781 23131;23132 23131 2 204590 0 SNPENNVGLITLANDCEVLTTLTPDTGR AQQDAVNIVCHSKTRSNPENNVGLITLAND NDCEVLTTLTPDTGRILSKLHTVQPKGKIT R S N G R I 1 1 4 2 1 0 2 2 0 1 4 0 0 0 2 1 5 0 0 2 0 0 28 0 3013.4662 P55036 P55036 43 70 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 3 0.0021035 60.104 By MS/MS 6 0 1 1 2102800 2102800 0 12950 1023 13776 32782 23133 23133 1 16397 0 SNPSAVAGNETPGASTK NKEESYDFSKSYEYKSNPSAVAGNETPGAS PSAVAGNETPGASTKGYPPPVAAKPTFGRS K S N T K G 3 0 2 0 0 0 1 2 0 0 0 1 0 0 2 3 2 0 0 1 0 0 17 0 1586.7536 Q9UDY2 Q9UDY2 1017 1033 TJP2 Tight junction protein ZO-2 yes yes 2 1.6087E-07 156.2 By MS/MS 3 0 1 1 607700 607700 0 12951 2764 13777 32783 23134 23134 1 15864 0 SNPSVFVIFQK YTSPPPQFDSCVDTRSNPSVFVIFQKDQVY VDTRSNPSVFVIFQKDQVYPQYVIEYTEDK R S N Q K D 0 0 1 0 0 1 0 0 0 1 0 1 0 2 1 2 0 0 0 2 0 0 11 0 1264.6816 Q7Z2W4 Q7Z2W4 872 882 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 1.4405E-05 192.26 By MS/MS 4 0 1 1 648840 648840 0 12952 1777 13778 32784 23135 23135 1 17713 0 SNQQLVDIIEK FQGTKVFVMPNGMLKSNQQLVDIIEKVKPE GMLKSNQQLVDIIEKVKPEIRLLIEKCNTV K S N E K V 0 0 1 1 0 2 1 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 11 0 1285.6878 P61289 P61289 111 121 PSME3 Proteasome activator complex subunit 3 yes yes 2 4.1726E-16 222.18 By MS/MS 8.5 0.5 1 1 2 8747600 8747600 0 12953 1096 13779 32785;32786 23136;23137 23136 2 686670 0 SNSEDKLNSK QNACILESVSEKTERSNSEDKLNSKILNEK EKTERSNSEDKLNSKILNEKPTTDEPEKAV R S N S K I 0 0 2 1 0 0 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 10 1 1120.536 Q9H2G2 Q9H2G2 370 379 SLK STE20-like serine/threonine-protein kinase yes yes 2 6.494E-06 210.08 By MS/MS 2 0 1 1 412020 412020 0 12954 2476 13780 32787 23138 23138 1 20480 0 SNSFVYLEPLPR EHQDAYHSANLVFSRSNSFVYLEPLPRELP FSRSNSFVYLEPLPRELPCGKTQTVQAHYV R S N P R E 0 1 1 0 0 0 1 0 0 0 2 0 0 1 2 2 0 0 1 1 0 0 12 0 1420.7351 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 455 466 yes yes 2 8.1692E-05 159.09 By MS/MS 3 1.41 1 1 1 1 1 5 984500 984500 0 + 12955 30 13781 32788;32789;32790;32791;32792 23139;23140;23141 23139 3 36911 0 SNSGEVIVTLEPCER GAHIKEEHCIFRSERSNSGEVIVTLEPCER SNSGEVIVTLEPCERSETYVNGKRVSQPVQ R S N E R S 0 1 1 0 1 0 3 1 0 1 1 0 0 0 1 2 1 0 0 2 0 0 15 0 1688.8039 O60333 O60333 588 602 KIF1B Kinesin-like protein KIF1B yes yes 2 4.6727E-06 153.75 By MS/MS 3 0 1 1 649770 649770 0 12956 245 13782 32793 23142 23142 1 16962 0 SNSLAFIK FISYNINIDIHYGVKSNSLAFIKRTPVIDA DIHYGVKSNSLAFIKRTPVIDADKPVSSQL K S N I K R 1 0 1 0 0 0 0 0 0 1 1 1 0 1 0 2 0 0 0 0 0 0 8 0 878.48617 Q14204 Q14204 113 120 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00023692 190.52 By MS/MS 1.5 0.5 1 1 2 717880 717880 0 12957 1421 13783 32794;32795 23143 23143 1 35207 0 SNTAGSQSQVETEA SGDHPTDTEMKEEQKSNTAGSQSQVETEA_ KSNTAGSQSQVETEA_______________ K S N E A - 2 0 1 0 0 2 2 1 0 0 0 0 0 0 0 3 2 0 0 1 0 0 14 0 1407.6114 Q02790 Q02790 446 459 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 5.2534E-08 185.25 By MS/MS By matching 6 0 2 1 1 5873900 5857700 16141 12958 1255 13784 32796;32797 23144 23144 1 45679 49503 SNTHEFVNLVK IRIEFVGQIELFNDKSNTHEFVNLVKELAL FNDKSNTHEFVNLVKELALPGELTQSRSYD K S N V K E 0 0 2 0 0 0 1 0 1 0 1 1 0 1 0 1 1 0 0 2 0 0 11 0 1286.6619 O75436 O75436 83 93 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2;3 0.0016294 125.23 By MS/MS 7 0 2 2 2671100 2671100 0 12959 309 13785 32798;32799 23145;23146 23146 2 47734 0 SNTLPISLQSIR EAANGNLDFVLSFLKSNTLPISLQSIRSSL FLKSNTLPISLQSIRSSLLLGFRRSMNINL K S N I R S 0 1 1 0 0 1 0 0 0 2 2 0 0 0 1 3 1 0 0 0 0 0 12 0 1327.746 P42704 P42704 530 541 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.7552E-12 214.04 By MS/MS By MS/MS 3.38 1.49 1 1 3 1 1 1 7 1 62538000 62445000 92724 12960 854 13786 32800;32801;32802;32803;32804;32805;32806;32807 23147;23148;23149;23150;23151;23152;23153;23154;23155;23156 23150 10 1623500 132890 SNTSLLQQNLR KLTQNVDLLGLLKWRSNTSLLQQNLRQLMK LKWRSNTSLLQQNLRQLMKVDGGEVVKFLQ R S N L R Q 0 1 2 0 0 2 0 0 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1272.6786 Q14185 Q14185 627 637 DOCK1 Dedicator of cytokinesis protein 1 yes yes 2 0.00012255 184.71 By MS/MS 2 0 1 1 214030 214030 0 12961 1417 13787 32808 23157 23157 1 10638 0 SNTSPEELGPLANQLTSDYGR TAKAIAVTVQEMVTKSNTSPEELGPLANQL ELGPLANQLTSDYGRLASEAKPAAVAAENE K S N G R L 1 1 2 1 0 1 2 2 0 0 3 0 0 0 2 3 2 0 1 0 0 0 21 0 2248.0608 Q9Y490 Q9Y490 1875 1895 TLN1 Talin-1 yes yes 2 2.6432E-06 137.39 By MS/MS 3 0.816 1 1 1 3 676880 676880 0 12962 2947 13788 32809;32810;32811 23158 23158 1 27743 0 SNVSDAVAQSTR QQAQEVHEKLRGWLKSNVSDAVAQSTRIIY WLKSNVSDAVAQSTRIIYGGSVTGATCKEL K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 195 206 TPI1 Triosephosphate isomerase yes yes 2 7.4764E-11 198.97 By MS/MS 8 0 1 1 975330 975330 0 12963 1064 13789 32812 23159 23159 1 64342 0 SNVTAVHK RIAEFAFEYARNNHRSNVTAVHKANIMRMS YARNNHRSNVTAVHKANIMRMSDGLFLQKC R S N H K A 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 2 0 0 8 0 854.46102 P50213 P50213 193 200 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 0.0019191 158.07 By MS/MS By matching 7.33 0.471 2 1 2 1 11494000 11481000 12097 12964 943 13790 32813;32814;32815 23160 23160 1 207970 49661 SPAGGESATVAAK EDEEDDEEHEGGGSRSPAGGESATVAAKGH SRSPAGGESATVAAKGHPCLRCPQPPQEQQ R S P A K G 4 0 0 0 0 0 1 2 0 0 0 1 0 0 1 2 1 0 0 1 0 0 13 0 1144.5724 Q147X3 Q147X3 55 67 NAA30 N-alpha-acetyltransferase 30 yes yes 2 0.0074304 98.754 By MS/MS 7 0 1 1 373910 373910 0 12965 1447 13791 32816 23161 23161 1 6681.9 0 SPAGLQVLNDYLADK ______________________________ SPAGLQVLNDYLADKSYIEGYVPSQADVAV K S P D K S 2 0 1 2 0 1 0 1 0 0 3 1 0 0 1 1 0 0 1 1 0 0 15 0 1602.8253 P24534 P24534 8 22 EEF1B2 Elongation factor 1-beta yes yes 2 5.2509E-07 198.48 By MS/MS 9 0.816 1 1 1 3 6753900 6753900 0 12966 677 13792 32817;32818;32819 23162;23163 23162 2 521740 0 SPAHLSLIR VFTQAIQWYQNHQPKSPAHLSLIREAANFK QNHQPKSPAHLSLIREAANFKLKYGRKKEA K S P I R E 1 1 0 0 0 0 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 0 9 0 992.57671 O76094 O76094 443 451 SRP72 Signal recognition particle subunit SRP72 yes yes 2;3 0.0019632 123.21 By MS/MS 5.33 0.471 2 1 3 4124800 4124800 0 12967 346 13793 32820;32821;32822 23164;23165 23165 2 110380 0 SPAIAAVGPIK AETIREVCTKYIYNRSPAIAAVGPIKQLPD IYNRSPAIAAVGPIKQLPDFKQIRSNMCWL R S P I K Q 3 0 0 0 0 0 0 1 0 2 0 1 0 0 2 1 0 0 0 1 0 0 11 0 1022.6124 O75439 O75439 462 472 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.0097571 98.582 By MS/MS 6.5 0.5 1 1 2 5183900 5183900 0 12968 311 13794 32823;32824 23166 23166 1 83757 0 SPAIGLNNLDK ALESNDLVSVQNQLRSPAIGLNNLDKAYVE NQLRSPAIGLNNLDKAYVERYANTLLSVKL R S P D K A 1 0 2 1 0 0 0 1 0 1 2 1 0 0 1 1 0 0 0 0 0 0 11 0 1140.6139 Q13576 Q13576 396 406 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.0013358 129.16 By MS/MS 3 0 1 1 887940 887940 0 12969 1383 13795 32825 23167 23167 1 23180 0 SPALQVLR NTILKCLRRFHVFARSPALQVLREMKAIGI RFHVFARSPALQVLREMKAIGIEPSLATYH R S P L R E 1 1 0 0 0 1 0 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 882.5287 Q96EY7 Q96EY7 351 358 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 2.3874E-08 224.43 By MS/MS 5.5 1.12 1 1 1 1 4 13966000 13966000 0 12970 2170 13796 32826;32827;32828;32829 23168 23168 1 504890 0 SPAPPLLHVAALGQK NAVKVQTLSNQPLLKSPAPPLLHVAALGQK SPAPPLLHVAALGQKQGILGAQPQLIFQPH K S P Q K Q 3 0 0 0 0 1 0 1 1 0 3 1 0 0 3 1 0 0 0 1 0 0 15 0 1497.8667 Q8N163 Q8N163 124 138 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 3 0.010745 80.96 By MS/MS 3 0 1 1 459310 459310 0 12971 1895 13797 32830 23169 23169 1 11990 0 SPAQILQWQVLSNTVPAK QFLPYPYYAKPAAVRSPAQILQWQVLSNTV QILQWQVLSNTVPAKSCQAQPTTMARHPHP R S P A K S 2 0 1 0 0 3 0 0 0 1 2 1 0 0 2 2 1 1 0 2 0 0 18 0 1979.084 CON__P02668 CON__P02668 69 86 yes yes 2 0.026304 70.68 By MS/MS 5.5 0.5 1 1 2 1565100 1565100 0 + 12972 40 13798 32831;32832 23170 23170 1 18155 0 SPASDTYIVFGEAK SKNILFVITKPDVYKSPASDTYIVFGEAKI KSPASDTYIVFGEAKIEDLSQQAQLAAAEK K S P A K I 2 0 0 1 0 0 1 1 0 1 0 1 0 1 1 2 1 0 1 1 0 0 14 0 1483.7195 Q13765;E9PAV3 Q13765 114 127 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 0.0032474 94.538 By MS/MS 7.5 0.5 1 1 2 1604600 1604600 0 12973 65 13799 32833;32834 23171 23171 0 58614 0 SPATSPISSNSHR IPFPCLLAGGLLTYKSPATSPISSNSHRSL YKSPATSPISSNSHRSLDGLSRTQGESISE K S P H R S 1 1 1 0 0 0 0 0 1 1 0 0 0 0 2 5 1 0 0 0 0 0 13 0 1339.648 Q9NR09 Q9NR09 577 589 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 3 0.026006 77.279 By MS/MS 2 0.816 1 1 1 3 430340 430340 0 12974 2596 13800 32835;32836;32837 23172 23172 1 19781 0 SPDCPVCSR AIKTPQCYKEDGSSKSPDCPVCSRSLNKLA EDGSSKSPDCPVCSRSLNKLAQPLPMAHCA K S P S R S 0 1 0 1 2 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 9 0 1076.4379 Q7L5Y9 Q7L5Y9 311 319 MAEA Macrophage erythroblast attacher yes yes 2 0.0026948 122.33 By MS/MS 7 0 1 1 822530 822530 0 12975 1769 13801 32838 23173 23173 1 14699 0 SPDEAYAIAK LQEAGVSVPKGYVAKSPDEAYAIAKKLGSK GYVAKSPDEAYAIAKKLGSKDVVIKAQVLA K S P A K K 3 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 10 0 1063.5186 Q9P2R7 Q9P2R7 79 88 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2 1.5478E-15 215.88 By MS/MS By matching 7 0 2 1 1 19376000 19350000 26481 12976 2741 13802 32839;32840 23174 23174 1 345780 108710 SPDEAYAIAKK LQEAGVSVPKGYVAKSPDEAYAIAKKLGSK YVAKSPDEAYAIAKKLGSKDVVIKAQVLAG K S P K K L 3 0 0 1 0 0 1 0 0 1 0 2 0 0 1 1 0 0 1 0 0 0 11 1 1191.6136 Q9P2R7 Q9P2R7 79 89 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 2;3 4.3198E-10 223.84 By MS/MS 7 0 2 2 4314000 4314000 0 12977 2741 13803 32841;32842 23175;23176 23175 1 77092 0 SPDELPSAGGDGGK SLGPGRGTRDKKKGRSPDELPSAGGDGGKS RSPDELPSAGGDGGKSKKFTLKRLMADELE R S P G K S 1 0 0 2 0 0 1 4 0 0 1 1 0 0 2 2 0 0 0 0 0 0 14 0 1285.5786 O60610 O60610 22 35 DIAPH1 Protein diaphanous homolog 1 yes yes 2 0.0057301 101.3 By MS/MS 3 0 1 1 387070 387070 0 12978 255 13804 32843 23177 23177 1 10105 0 SPDEPLPVVR VTRLLLAPRRGLTVRSPDEPLPVVRIPVAL GLTVRSPDEPLPVVRIPVALQRQLEQRQSR R S P V R I 0 1 0 1 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1107.5924 Q9NUL7 Q9NUL7 28 37 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.00069207 137.14 By MS/MS By matching 6 0 2 1 1 8587000 8544800 42134 12979 2638 13805 32844;32845 23178 23178 1 66633 129220 SPDFHEEIK EFSKEAYTAVVYHNRSPDFHEEIKVKLPAT VVYHNRSPDFHEEIKVKLPATLTDHHHLLF R S P I K V 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 0 0 0 9 0 1100.5138 Q96N67 Q96N67 625 633 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.011414 101.72 By MS/MS 2 0 1 1 147170 147170 0 12980 2230 13806 32846 23179 23179 1 7314.9 0 SPDFTNENPLETR VDNSSLTGESEPQTRSPDFTNENPLETRNI TRSPDFTNENPLETRNIAFFSTNCVEGTAR R S P T R N 0 1 2 1 0 0 2 0 0 0 1 0 0 1 2 1 2 0 0 0 0 0 13 0 1518.6951 P05023 P05023 228 240 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 3.111E-35 267.07 By MS/MS By MS/MS 4.91 2.35 1 1 1 2 2 1 1 1 1 9 2 36226000 36073000 153090 12981 463 13807 32847;32848;32849;32850;32851;32852;32853;32854;32855;32856;32857 23180;23181;23182;23183;23184;23185;23186;23187;23188 23187 9 1243600 341960 SPDTFVR AKLEVAPISDIIAIKSPDTFVRTIYAGNAL ISDIIAIKSPDTFVRTIYAGNALCTVKCDE K S P V R T 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 7 0 820.40792 P13804 P13804 140 146 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.0070595 167.82 By MS/MS 8 0.816 1 1 1 3 3315200 3315200 0 12982 582 13808 32858;32859;32860 23189 23189 1 253890 0 SPDTILQK LRRYIKEYVTCHTCRSPDTILQKDTRLYFL VTCHTCRSPDTILQKDTRLYFLQCETCHSR R S P Q K D 0 0 0 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 8 0 900.49165 P20042 P20042 286 293 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.0077023 127.02 By MS/MS By matching 6 0 2 1 1 6316000 6288000 27998 12983 638 13809 32861;32862 23190 23190 1 49034 85868 SPDTNYLFMGDYVDR GQFHDLMELFRIGGKSPDTNYLFMGDYVDR SPDTNYLFMGDYVDRGYYSVETVTLLVALK K S P D R G 0 1 1 3 0 0 0 1 0 0 1 0 1 1 1 1 1 0 2 1 0 0 15 0 1791.7774 P67775;P62714 P67775 75 89 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes no 2 2.7118E-15 212.59 By MS/MS 8 0 1 1 376030 376030 0 12984 1181 13810 32863 23191 23191 920 1 24807 0 SPEIISGR ANWGLPIAAINDMKKSPEIISGRMTFALCC AINDMKKSPEIISGRMTFALCCYSLTFMRF K S P G R M 0 1 0 0 0 0 1 1 0 2 0 0 0 0 1 2 0 0 0 0 0 0 8 0 857.46068 Q9Y5U8 Q9Y5U8 47 54 MPC1 Mitochondrial pyruvate carrier 1 yes yes 2 0.008849 122.74 By MS/MS 10 0 1 1 568650 568650 0 12985 2981 13811 32864 23192 23192 1 604420 0 SPELLAR INNNAVTKMAQSSSKSPELLARYCDSLLKK KMAQSSSKSPELLARYCDSLLKKSSKNPEE K S P A R Y 1 1 0 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 7 0 784.4443 Q13616 Q13616 418 424 CUL1 Cullin-1 yes yes 2 0.035671 111.04 By MS/MS 5 0.816 1 1 1 3 2076400 2076400 0 12986 1387 13812 32865;32866;32867 23193 23193 1 60362 0 SPELPSPQAEK TLRITVEDSDKQLLKSPELPSPQAEKRLPK QLLKSPELPSPQAEKRLPKLRLEIIDKDSK K S P E K R 1 0 0 0 0 1 2 0 0 0 1 1 0 0 3 2 0 0 0 0 0 0 11 0 1181.5928 Q9H078 Q9H078 663 673 CLPB Caseinolytic peptidase B protein homolog yes yes 2 0.0045399 109.66 By MS/MS 6 0 1 1 3563900 3563900 0 12987 2448 13813 32868 23194 23194 1 27792 0 SPELPSPQAEKR TLRITVEDSDKQLLKSPELPSPQAEKRLPK LLKSPELPSPQAEKRLPKLRLEIIDKDSKT K S P K R L 1 1 0 0 0 1 2 0 0 0 1 1 0 0 3 2 0 0 0 0 0 0 12 1 1337.6939 Q9H078 Q9H078 663 674 CLPB Caseinolytic peptidase B protein homolog yes yes 3 0.038587 91.961 By MS/MS 6 0 1 1 0 0 0 12988 2448 13814 32869 23195 23195 1 0 0 SPELVQAMFPK ESEWPFLIITDLFLKSPELVQAMFPKLNNQ LFLKSPELVQAMFPKLNNQERVTLLDLMIA K S P P K L 1 0 0 0 0 1 1 0 0 0 1 1 1 1 2 1 0 0 0 1 0 0 11 0 1245.6427 Q9UBB4 Q9UBB4 227 237 ATXN10 Ataxin-10 yes yes 2 5.419E-05 164.97 By MS/MS 7 0 1 1 1270100 1270100 0 12989 2744 13815 32870 23196 23196 1603 1 22697 0 SPEQNVPVILLK GTDPRILSIAAEVAKSPEQNVPVILLKLKE VAKSPEQNVPVILLKLKEIINITPLGSSEL K S P L K L 0 0 1 0 0 1 1 0 0 1 2 1 0 0 2 1 0 0 0 2 0 0 12 0 1335.7762 Q15051 Q15051 20 31 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 2 2.2294E-16 215.72 By MS/MS 5 0 1 1 1581200 1581200 0 12990 1472 13816 32871 23197 23197 1 64996 0 SPEQQLSATQK GGVITSDMIEMIFSKSPEQQLSATQKFRKL IFSKSPEQQLSATQKFRKLLSKEPNPPIDE K S P Q K F 1 0 0 0 0 3 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1215.6095 P52294 P52294 95 105 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 2 0.0035196 136.49 By MS/MS 6 0 1 1 3709200 3709200 0 12991 984 13817 32872 23198 23198 1 28925 0 SPEVGMR TGHRIIIEYLLEATRSPEVGMRQAAAIILN EYLLEATRSPEVGMRQAAAIILNIYCSRSK R S P M R Q 0 1 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 7 0 774.36942 Q92616 Q92616 2162 2168 GCN1L1 Translational activator GCN1 yes yes 2 0.022086 120.65 By MS/MS 1.5 0.5 1 1 2 522820 522820 0 12992 2068 13818 32873;32874 23199 23199 1 25967 0 SPEVLLGSAR PIRVYTHEVVTLWYRSPEVLLGSARYSTPV TLWYRSPEVLLGSARYSTPVDIWSIGTIFA R S P A R Y 1 1 0 0 0 0 1 1 0 0 2 0 0 0 1 2 0 0 0 1 0 0 10 0 1027.5662 P06493 P06493 171 180 CDK1 Cyclin-dependent kinase 1 yes yes 2 1.0409E-06 182.39 By MS/MS By MS/MS 8.4 1.02 1 2 1 1 4 1 25057000 25057000 0 12993 477 13819 32875;32876;32877;32878;32879 23200;23201 23201 2 1797600 0 SPEVLSGGEDGAVR RGHTDYIHCLALRERSPEVLSGGEDGAVRL RSPEVLSGGEDGAVRLWDLRTAKEVQTIEV R S P V R L 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 2 0 0 0 2 0 0 14 0 1371.663 Q86W42 Q86W42 180 193 THOC6 THO complex subunit 6 homolog yes yes 2 2.4896E-06 174.77 By MS/MS 7.5 0.5 1 1 2 1045500 1045500 0 12994 1834 13820 32880;32881 23202 23202 1 60796 0 SPEYLSLFIDDK TIAGDFEYFLNLNSRSPEYLSLFIDDKLKK NSRSPEYLSLFIDDKLKKGVKGLTEQEVET R S P D K L 0 0 0 2 0 0 1 0 0 1 2 1 0 1 1 2 0 0 1 0 0 0 12 0 1425.7028 Q13618 Q13618 384 395 CUL3 Cullin-3 yes yes 2 0.00057134 152.54 By MS/MS 5 0.816 1 1 1 3 634740 634740 0 12995 1389 13821 32882;32883;32884 23203;23204 23203 2 16825 0 SPFAYCMMIR AVNKMISKVTRHGLKSPFAYCMMIRVASKQ RHGLKSPFAYCMMIRVASKQLEEEDGSRDS K S P I R V 1 1 0 0 1 0 0 0 0 1 0 0 2 1 1 1 0 0 1 0 0 0 10 0 1274.561 Q9Y678 Q9Y678 225 234 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0010717 109.21 By MS/MS 4 0 1 1 871690 871690 0 12996 2996 13822 32885 23205 23205 1723;1724 1 23796 0 SPFEDSR MAPQNVSASKKRHSRSPFEDSRGYMMMFPR ASKKRHSRSPFEDSRGYMMMFPRVSPPPAP R S P S R G 0 1 0 1 0 0 1 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 7 0 836.36645 O14654 O14654 735 741 IRS4 Insulin receptor substrate 4 yes yes 2 0.050256 101.28 By MS/MS 3 1.41 1 1 1 1 1 5 1412100 1412100 0 12997 118 13823 32886;32887;32888;32889;32890 23206 23206 1 44886 0 SPFEVYVDK THKVTVLFAGQHIAKSPFEVYVDKSQGDAS GQHIAKSPFEVYVDKSQGDASKVTAQGPGL K S P D K S 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 1 0 0 1 2 0 0 9 0 1082.5284 P21333 P21333 368 376 FLNA Filamin-A yes yes 2 0.00154 134.77 By MS/MS 2 0.816 1 1 1 3 1280000 1280000 0 12998 648 13824 32891;32892;32893 23207 23207 1 56124 0 SPFGNPENVR TIGARQEMVRRSRERSPFGNPENVRWRKSV RSRERSPFGNPENVRWRKSVTHWKQTSDRV R S P V R W 0 1 2 0 0 0 1 1 0 0 0 0 0 1 2 1 0 0 0 1 0 0 10 0 1115.536 Q96HP0 Q96HP0 1343 1352 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0056906 105.2 By MS/MS 2 0 1 1 376300 376300 0 12999 2193 13825 32894 23208 23208 1 18704 0 SPFSVAVSPSLDLSK PVGVNVTYGGDPIPKSPFSVAVSPSLDLSK SPFSVAVSPSLDLSKIKVSGLGEKVDVGKD K S P S K I 1 0 0 1 0 0 0 0 0 0 2 1 0 1 2 5 0 0 0 2 0 0 15 0 1532.8086 P21333 P21333 959 973 FLNA Filamin-A yes yes 2 0.006586 125.97 By MS/MS 2.5 0.5 1 1 2 1245500 1245500 0 13000 648 13826 32895;32896 23209 23209 0 50772 0 SPFTVGVAAPLDLSK NMQVLVTYGGDPIPKSPFTVGVAAPLDLSK SPFTVGVAAPLDLSKIKLNGLENRVEVGKD K S P S K I 2 0 0 1 0 0 0 1 0 0 2 1 0 1 2 2 1 0 0 2 0 0 15 0 1500.8188 O75369 O75369 932 946 FLNB Filamin-B yes yes 2 7.2224E-06 151.13 By MS/MS 2.5 0.5 1 1 2 335560 335560 0 13001 300 13827 32897;32898 23210 23210 1 13152 0 SPFWILSIPSEDIAR LFGGQFASSQETYGKSPFWILSIPSEDIAR SPFWILSIPSEDIARNLMKRTVCAKSIFEL K S P A R N 1 1 0 1 0 0 1 0 0 3 1 0 0 1 2 3 0 1 0 0 0 0 15 0 1729.9039 Q7Z4G4 Q7Z4G4 47 61 TRMT11 tRNA (guanine(10)-N2)-methyltransferase homolog yes yes 2 0.009314 95.094 By MS/MS 6 0 1 1 242710 242710 0 13002 1792 13828 32899 23211 23211 1 1892.7 0 SPFYLDSLEEK FGGPRPRRQPPPPPRSPFYLDSLEEKRKRQ PPPRSPFYLDSLEEKRKRQRSERLERIFQL R S P E K R 0 0 0 1 0 0 2 0 0 0 2 1 0 1 1 2 0 0 1 0 0 0 11 0 1326.6343 Q6ZRS2 Q6ZRS2 1882 1892 SRCAP Helicase SRCAP yes yes 2 0.0010579 132.88 By MS/MS 1 0 1 1 99056 99056 0 13003 1743 13829 32900 23212 23212 1 4839.7 0 SPGAPGPLTLK QHPVPPPAQNQNQVRSPGAPGPLTLKEVEE NQVRSPGAPGPLTLKEVEELEQLTQQLMQD R S P L K E 1 0 0 0 0 0 0 2 0 0 2 1 0 0 3 1 1 0 0 0 0 0 11 0 1036.5917 Q15942 Q15942 344 354 ZYX Zyxin yes yes 2 0.018363 90.827 By MS/MS 5 0 1 1 2720600 2720600 0 13004 1528 13830 32901 23213 23213 1 111830 0 SPGESALLDGWLQR GAGGVAGGPAAGPGRSPGESALLDGWLQRG RSPGESALLDGWLQRGVGRGAGGGEAGACR R S P Q R G 1 1 0 1 0 1 1 2 0 0 3 0 0 0 1 2 0 1 0 0 0 0 14 0 1527.7682 Q96A46 Q96A46 22 35 SLC25A28 Mitoferrin-2 yes yes 2 2.5723E-08 190.53 By MS/MS 7.5 0.5 1 1 2 292070 292070 0 13005 2116 13831 32902;32903 23214 23214 1 10830 0 SPGEVLALVQR LLIKGNSASKTRLCRSPGEVLALVQRKVVP RLCRSPGEVLALVQRKVVPTFEAVAPQSRE R S P Q R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1167.6612 O94927 O94927 417 427 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 0.00086708 135.43 By MS/MS 5 0 1 1 494870 494870 0 13006 360 13832 32904 23215 23215 1 20341 0 SPGSQGVR AKLGLREIRIHLCQRSPGSQGVRDFIEKRY RIHLCQRSPGSQGVRDFIEKRYVELKKANP R S P V R D 0 1 0 0 0 1 0 2 0 0 0 0 0 0 1 2 0 0 0 1 0 0 8 0 786.39842 O43678 O43678 27 34 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 2 0.0058691 133.86 By MS/MS 10 0 1 1 115950 115950 0 13007 213 13833 32905 23216 23216 1 123240 0 SPGSVVFR ALVAGVLGNEFSILKSPGSVVFRNGNWPIP NEFSILKSPGSVVFRNGNWPIPGERIPDVA K S P F R N 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 2 0 0 0 2 0 0 8 0 847.4552 O75787 O75787 24 31 ATP6AP2 Renin receptor yes yes 2 0.0069891 129.68 By MS/MS 8 0 1 1 843960 843960 0 13008 328 13834 32906 23217 23217 1 55676 0 SPGTQEMLR AVKALKLESENRNGRSPGTQEMLRMWYELD ENRNGRSPGTQEMLRMWYELDEESRRKYQK R S P L R M 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 9 0 1017.4913 O95602 O95602 1114 1122 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.0097301 108.57 By MS/MS 2 0 1 1 155050 155050 0 13009 401 13835 32907 23218 23218 1 7706.7 0 SPIAEAVFR ATKSVLFVCLGNICRSPIAEAVFRKLVTDQ LGNICRSPIAEAVFRKLVTDQNISENWRVD R S P F R K 2 1 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 9 0 988.53418 P24666 P24666 20 28 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 2 0.0014005 136.27 By MS/MS 10 0 1 1 3875300 3875300 0 13010 679 13836 32908 23219 23219 1 4119000 0 SPIAPEELALVHNLR INALWGRTTLKREDKSPIAPEELALVHNLR SPIAPEELALVHNLRKMMKNDWHGGAIVSA K S P L R K 2 1 1 0 0 0 2 0 1 1 3 0 0 0 2 1 0 0 0 1 0 0 15 0 1657.9152 P51398 P51398 280 294 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2;3 5.3921E-07 160.52 By MS/MS 7 0 2 2 4851500 4851500 0 13011 963 13837 32909;32910 23220;23221 23221 2 86697 0 SPIEFLENAYEK FSPIPFLGHAIAFGKSPIEFLENAYEKYGP FGKSPIEFLENAYEKYGPVFSFTMVGKTFT K S P E K Y 1 0 1 0 0 0 3 0 0 1 1 1 0 1 1 1 0 0 1 0 0 0 12 0 1438.698 Q16850 Q16850 80 91 CYP51A1 Lanosterol 14-alpha demethylase yes yes 2 5.1424E-12 213.35 By MS/MS 6.5 0.5 1 1 2 4433900 4433900 0 13012 1551 13838 32911;32912 23222 23222 1 36774 0 SPIIFIGTGEHIDDFEPFK HAKGGGALSAVAATKSPIIFIGTGEHIDDF FIGTGEHIDDFEPFKTQPFISKLLGMGDIE K S P F K T 0 0 0 2 0 0 2 2 1 4 0 1 0 3 2 1 1 0 0 0 0 0 19 0 2161.0732 P61011 P61011 268 286 SRP54 Signal recognition particle 54 kDa protein yes yes 3 0.0010681 101.96 By MS/MS 6 0 1 1 1839100 1839100 0 13013 1082 13839 32913 23223 23223 1 14341 0 SPILVATAVAAR QRDREEALHQFRSGKSPILVATAVAARGLD SGKSPILVATAVAARGLDISNVKHVINFDL K S P A R G 4 1 0 0 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1167.6976 O00571;O15523 O00571 492 503 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 1.1498E-11 212.03 By MS/MS By MS/MS 6.67 1.49 2 1 1 1 1 5 1 23447000 23333000 113880 13014 105 13840 32914;32915;32916;32917;32918;32919 23224;23225;23226 23225 2 958510 336960 SPLAAPR QYIPVLVDSFLPLLKSPLAAPRIKNPFLSL DSFLPLLKSPLAAPRIKNPFLSLAACVMPS K S P P R I 2 1 0 0 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 7 0 710.40752 Q92616 Q92616 890 896 GCN1L1 Translational activator GCN1 yes yes 2 0.017609 132.96 By MS/MS 1.5 0.5 1 1 2 3919100 3919100 0 13015 2068 13841 32920;32921 23227 23227 1 194710 0 SPLAELGVLK FVSLDHIKELLMETRSPLAELGVLKKLCDH LMETRSPLAELGVLKKLCDHPRLLSARACC R S P L K K 1 0 0 0 0 0 1 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 10 0 1025.6121 Q2NKX8 Q2NKX8 399 408 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 0.00054942 143.03 By MS/MS 3 0 1 1 476200 476200 0 13016 1559 13842 32922 23228 23228 1 12431 0 SPLFVGK FNRPFLCILYDRNTKSPLFVGKVVNPTQA_ ILYDRNTKSPLFVGKVVNPTQA________ K S P G K V 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 7 0 746.43268 CON__P34955 CON__P34955 403 409 yes yes 2 0.013839 143.37 By MS/MS 6 0 1 1 1197800 1197800 0 + 13017 51 13843 32923 23229 23229 1 9340.4 0 SPLGEVAIR FSAMEFLDGDGGSLRSPLGEVAIRDIVQFV DGGSLRSPLGEVAIRDIVQFVPFRQFQNAP R S P I R D 1 1 0 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 9 0 940.53418 O75131 O75131 476 484 CPNE3 Copine-3 yes yes 2 0.010711 106.68 By MS/MS 6 0 1 1 9251500 9251500 0 13018 282 13844 32924 23230 23230 1 72144 0 SPLIIFNDCELDK AVSNLKKVSLELGGKSPLIIFNDCELDKAV GKSPLIIFNDCELDKAVRMGMGAVFFNKGE K S P D K A 0 0 1 2 1 0 1 0 0 2 2 1 0 1 1 1 0 0 0 0 0 0 13 0 1562.765 Q3SY69 Q3SY69 699 711 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.00026578 145.23 By MS/MS 4 0 1 1 3729200 3729200 0 13019 1570 13845 32925 23231 23231 1 101800 0 SPLLQLPHIEEDNLR MKLSQMAVQGLQQFKSPLLQLPHIEEDNLR SPLLQLPHIEEDNLRRVSNHKKYKIKTIQD K S P L R R 0 1 1 1 0 1 2 0 1 1 4 0 0 0 2 1 0 0 0 0 0 0 15 0 1772.9421 Q9UGP8 Q9UGP8 382 396 SEC63 Translocation protein SEC63 homolog yes yes 3 0.0040033 98.654 By MS/MS 4 0 1 1 476600 476600 0 13020 2775 13846 32926 23232 23232 1 13011 0 SPLTQEQLIPNLAMK EEHLQRVGHFDPVTRSPLTQEQLIPNLAMK SPLTQEQLIPNLAMKEVIDAFISENGWVED R S P M K E 1 0 1 0 0 2 1 0 0 1 3 1 1 0 2 1 1 0 0 0 0 0 15 0 1681.9073 Q9UNE7 Q9UNE7 273 287 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 1.1151E-07 171.49 By MS/MS 8 0 1 1 1264700 1264700 0 13021 2838 13847 32927 23233 23233 1634 1 83433 0 SPLVMDVLNIQGVQR SISTEFLALMKKVSKSPLVMDVLNIQGVQR SPLVMDVLNIQGVQRSLERLADLLGKIQKA K S P Q R S 0 1 1 1 0 2 0 1 0 1 2 0 1 0 1 1 0 0 0 3 0 0 15 0 1667.9029 Q14204 Q14204 1585 1599 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.2971E-14 198.97 By MS/MS 2 0.816 1 1 1 3 482980 482980 0 13022 1421 13848 32928;32929;32930 23234;23235 23235 1117 2 21120 0 SPNLDLVETEIK DMHLVKKLAALLKTKSPNLDLVETEIKELI KTKSPNLDLVETEIKELILDIKYPATKKQA K S P I K E 0 0 1 1 0 0 2 0 0 1 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1356.7137 Q9H2M9 Q9H2M9 568 579 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 5.1659E-11 231.17 By MS/MS 3 0 1 1 1112800 1112800 0 13023 2481 13849 32931 23236 23236 1 29050 0 SPNLWLK IELFYKFVPLLPGNRSPNLWLKDVLKEEGV VPLLPGNRSPNLWLKDVLKEEGVSFLINTF R S P L K D 0 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 0 7 0 856.48069 P78527 P78527 1203 1209 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.017299 133.81 By MS/MS 2 0.816 1 1 1 3 2141800 2141800 0 13024 1197 13850 32932;32933;32934 23237;23238 23237 2 95674 0 SPPILPTLDSLK NFSLTMMVIFFLQRRSPPILPTLDSLKTLA QRRSPPILPTLDSLKTLADAEDKCVIEGNN R S P L K T 0 0 0 1 0 0 0 0 0 1 3 1 0 0 3 2 1 0 0 0 0 0 12 0 1279.7388 Q9NVV4 Q9NVV4 392 403 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 2 0.034903 79.07 By MS/MS 6.5 1.12 1 1 1 1 4 5124300 5124300 0 13025 2663 13851 32935;32936;32937;32938 23239 23239 1 48988 0 SPQEEALQR DSDSSQRDRNGNQLRSPQEEALQRLVNLYG NGNQLRSPQEEALQRLVNLYGLLHGLQAAV R S P Q R L 1 1 0 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1056.52 Q92974 Q92974 733 741 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 2 0.00011483 169.65 By MS/MS 4 0 1 1 1961300 1961300 0 13026 2094 13852 32939 23240 23240 1 53541 0 SPQENLVPCDVLLLR ASDEIVPGDIVSIGRSPQENLVPCDVLLLR SPQENLVPCDVLLLRGRCIVDEAMLTGESV R S P L R G 0 1 1 1 1 1 1 0 0 0 4 0 0 0 2 1 0 0 0 2 0 0 15 0 1751.924 Q9HD20 Q9HD20 328 342 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.00026848 131.13 By MS/MS 2.5 1.12 1 1 1 1 4 1204900 1204900 0 13027 2566 13853 32940;32941;32942;32943 23241;23242;23243 23243 3 40405 0 SPQNQYPAELMR RLMMEQRSRDPGMVRSPQNQYPAELMRRFE MVRSPQNQYPAELMRRFELYFQGPSSNKPR R S P M R R 1 1 1 0 0 2 1 0 0 0 1 0 1 0 2 1 0 0 1 0 0 0 12 0 1432.6769 P33993 P33993 121 132 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.00030544 141.08 By MS/MS By matching 5 0 2 1 1 1650400 1632600 17777 13028 775 13854 32944;32945 23244 23244 529 1 67107 52603 SPQPQLLSNK WTLTTRFIEARASGKSPQPQLLSNKEKAEA RASGKSPQPQLLSNKEKAEARKLWEYKNSV K S P N K E 0 0 1 0 0 2 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1110.6033 Q15031 Q15031 711 720 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0002477 154.84 By MS/MS 4 0 1 1 3775000 3775000 0 13029 1467 13855 32946 23245 23245 1 103050 0 SPQSNSPVLLSR PEWRDPDKYCPSYNKSPQSNSPVLLSRLHF YNKSPQSNSPVLLSRLHFEKDADSSERIIA K S P S R L 0 1 1 0 0 1 0 0 0 0 2 0 0 0 2 4 0 0 0 1 0 0 12 0 1283.6834 Q96FZ2 Q96FZ2 45 56 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 2 0.0002547 150.09 By MS/MS 7.5 0.5 1 1 2 928040 928040 0 13030 2175 13856 32947;32948 23246 23246 1 30722 0 SPQTPELVEALAFR FSPVIIKEWAAYKGKSPQTPELVEALAFRE KSPQTPELVEALAFREWTCPNLKRLWLGKA K S P F R E 2 1 0 0 0 1 2 0 0 0 2 0 0 1 2 1 1 0 0 1 0 0 14 0 1556.8199 Q9NZB2 Q9NZB2 652 665 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 2 0.00044926 133.88 By MS/MS 3.5 0.5 1 1 2 561870 561870 0 13031 2709 13857 32949;32950 23247 23247 1 14795 0 SPRPQDLIR QRALLQQQPEDDSKRSPRPQDLIRLYDIIL EDDSKRSPRPQDLIRLYDIILQNLVELLQL R S P I R L 0 2 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 9 1 1080.604 Q9UHB9 Q9UHB9 418 426 SRP68 Signal recognition particle subunit SRP68 yes yes 3 0.0037963 108.47 By MS/MS 5.5 0.5 1 1 2 2062300 2062300 0 13032 2779 13858 32951;32952 23248 23248 1 67237 0 SPSAQLMEQVAQLK HTHVVDITRTSPAAKSPSAQLMEQVAQLKS KSPSAQLMEQVAQLKSLSDTVEKLKDEVLK K S P L K S 2 0 0 0 0 3 1 0 0 0 2 1 1 0 1 2 0 0 0 1 0 0 14 0 1528.7919 Q14203 Q14203 1180 1193 DCTN1 Dynactin subunit 1 yes yes 2 3.9378E-05 153.49 By MS/MS 3 0 1 1 917230 917230 0 13033 1420 13859 32953 23249 23249 1096 1 23944 0 SPSDLLDASAVSATSR RNNREILAGKPAAQKSPSDLLDASAVSATS PSDLLDASAVSATSRYIEEQQATQQLIMDE K S P S R Y 3 1 0 2 0 0 0 0 0 0 2 0 0 0 1 5 1 0 0 1 0 0 16 0 1575.774 O60499 O60499 132 147 STX10 Syntaxin-10 yes yes 2 1.9223E-10 225.79 By MS/MS 8 0 1 1 1253900 1253900 0 13034 250 13860 32954 23250 23250 1 82718 0 SPSGSAFGSQENLR RGQLGTYTIASPPERSPSGSAFGSQENLRW RSPSGSAFGSQENLRWRKDMTHWRQNTEKL R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 Q96N67 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 4.1318E-59 294.49 By MS/MS 2 0.816 1 1 1 3 4480900 4480900 0 13035 2230 13861 32955;32956;32957 23251;23252 23251 2 203100 0 SPSISNMAALSR HSQSRSTSSPSLHSRSPSISNMAALSRAHS HSRSPSISNMAALSRAHSPALGVHSFSGVQ R S P S R A 2 1 1 0 0 0 0 0 0 1 1 0 1 0 1 4 0 0 0 0 0 0 12 0 1232.6183 Q9H1A4 Q9H1A4 341 352 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0080189 95.094 By MS/MS 1.5 0.5 1 1 2 301610 301610 0 13036 2463 13862 32958;32959 23253 23253 1508 1 14860 0 SPSNKDAALLEAAR MCALAAALVVHCYSKSPSNKDAALLEAARA KSPSNKDAALLEAARANNMQEVSRLLSEGA K S P A R A 4 1 1 1 0 0 1 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1441.7525 Q9H078 Q9H078 130 143 CLPB Caseinolytic peptidase B protein homolog yes yes 2;3 0.0024505 129.76 By MS/MS 6 0 2 2 32517000 32517000 0 13037 2448 13863 32960;32961 23254;23255 23254 2 253570 0 SPSSLLIANLHLQ NLIFKDGVLSEWSGRSPSSLLIANLHLQ__ GRSPSSLLIANLHLQ_______________ R S P L Q - 1 0 1 0 0 1 0 0 1 1 4 0 0 0 1 3 0 0 0 0 0 0 13 0 1391.7773 Q658Y4 Q658Y4 826 838 FAM91A1 Protein FAM91A1 yes yes 2 0.004103 108.31 By MS/MS 4 0 1 1 143840 143840 0 13038 1668 13864 32962 23256 23256 1 3926.7 0 SPSVAVVQPK AGIENKFGLYLPKFKSPSVAVVQPKAAVAA LPKFKSPSVAVVQPKAAVAATQ________ K S P P K A 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 2 0 0 0 3 0 0 10 0 1010.576 O75746 O75746 662 671 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.00011045 164.46 By MS/MS 5 0 1 1 1173800 1173800 0 13039 327 13865 32963 23257 23257 1 48246 0 SPTAPSVFSPTGNR TTTPLKGIPKQAPFRSPTAPSVFSPTGNRT RSPTAPSVFSPTGNRTPIPPSRTLLRKERG R S P N R T 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 3 2 0 0 1 0 0 14 0 1416.6997 Q9H3P2 Q9H3P2 225 238 NELFA Negative elongation factor A yes yes 2 0.0006638 129.82 By MS/MS 5 0 1 1 577260 577260 0 13040 2490 13866 32964 23258 23258 1 23728 0 SPTLLEVSMPHFMR LDHFSVDGYDSSVRKSPTLLEVSMPHFMRT KSPTLLEVSMPHFMRTNSFAEDLDLEGETL K S P M R T 0 1 0 0 0 0 1 0 1 0 2 0 2 1 2 2 1 0 0 1 0 0 14 0 1643.8164 P51787 P51787 468 481 KCNQ1 Potassium voltage-gated channel subfamily KQT member 1 yes yes 2 0.0063489 81.95 By MS/MS 7 0 2 2 874070 874070 0 13041 977 13867;13868 32965;32966 23259;23260 23260 735;736 2 15620 0 SPTWFGIPR EFLYVEGLPEGIPFRSPTWFGIPRLERIVR EGIPFRSPTWFGIPRLERIVRGSNKIKFVV R S P P R L 0 1 0 0 0 0 0 1 0 1 0 0 0 1 2 1 1 1 0 0 0 0 9 0 1059.5502 P78347 P78347 620 628 GTF2I General transcription factor II-I yes yes 2 0.00025345 160.63 By MS/MS 3.5 0.5 1 1 2 1175300 1175300 0 13042 1194 13869 32967;32968 23261 23261 1 30785 0 SPVAKDVDLEFLAK DEKSRVAILKANLRKSPVAKDVDLEFLAKM KSPVAKDVDLEFLAKMTNGFSGADLTEICQ K S P A K M 2 0 0 2 0 0 1 0 0 0 2 2 0 1 1 1 0 0 0 2 0 0 14 1 1530.8294 P55072 P55072 664 677 VCP Transitional endoplasmic reticulum ATPase yes yes 3 0.0062667 82.578 By MS/MS 4 0 1 1 742350 742350 0 13043 1026 13870 32969 23262 23262 1 20265 0 SPVESTTEPPAVR ETNVFFYPRLLPLTKSPVESTTEPPAVRAS TKSPVESTTEPPAVRASEERLSNGDIYLLE K S P V R A 1 1 0 0 0 0 2 0 0 0 0 0 0 0 3 2 2 0 0 2 0 0 13 0 1368.6885 P53992 P53992 957 969 SEC24C Protein transport protein Sec24C yes yes 2 1.608E-07 181.87 By MS/MS 4 0 1 1 1717700 1717700 0 13044 1009 13871 32970 23263 23263 1 46892 0 SPVEVAQDVLAAVGK GSRYGVMDTTTAQGRSPVEVAQDVLAAVGK SPVEVAQDVLAAVGKKKKDVILADLLPSLA R S P G K K 3 0 0 1 0 1 1 1 0 0 1 1 0 0 1 1 0 0 0 4 0 0 15 0 1481.809 Q6IAN0 Q6IAN0 268 282 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 0.00056603 121.56 By MS/MS 8 0 1 1 302810 302810 0 13045 1682 13872 32971 23264 23264 1 19976 0 SPVFSSSDGSLWETVAR PAAHSFVDLLLCVARSPVFSSSDGSLWETV VFSSSDGSLWETVARALSCLGPTHMGPLAL R S P A R A 1 1 0 1 0 0 1 1 0 0 1 0 0 1 1 5 1 1 0 2 0 0 17 0 1823.869 Q6PJG6 Q6PJG6 269 285 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 6.9045E-14 187.74 By MS/MS 5.5 0.5 1 1 2 430490 430490 0 13046 1717 13873 32972;32973 23265 23265 1 8644.2 0 SPVGEFLLAGGR MARYVFSNFTAVPKRSPVGEFLLAGGRTKT PKRSPVGEFLLAGGRTKTWLVGNKLVTVTT R S P G R T 1 1 0 0 0 0 1 3 0 0 2 0 0 1 1 1 0 0 0 1 0 0 12 0 1201.6455 P49815 P49815 1045 1056 TSC2 Tuberin yes yes 2 0.0013875 128.91 By MS/MS 2 0.816 1 1 1 3 344810 344810 0 13047 935 13874 32974;32975;32976 23266;23267;23268 23268 3 12357 0 SPVILLR KSLMNLLFSLHVSYKSPVILLRDLSQDIHG FSLHVSYKSPVILLRDLSQDIHGHLGDIDQ K S P L R D 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 7 0 796.51707 Q9NVI1 Q9NVI1 1041 1047 FANCI Fanconi anemia group I protein yes yes 2 0.019537 127.66 By MS/MS 3 0 1 1 1280700 1280700 0 13048 2654 13875 32977 23269 23269 1 33434 0 SPVPLTPPGCVALDTR LTLGWDTYLSYLKYRSPVPLTPPGCVALDT PVPLTPPGCVALDTRAD_____________ R S P T R A 1 1 0 1 1 0 0 1 0 0 2 0 0 0 4 1 2 0 0 2 0 0 16 0 1678.8712 Q567V2 Q567V2 189 204 MPV17L2 Mpv17-like protein 2 yes yes 2 0.0066764 100.22 By MS/MS 9.5 0.5 1 1 2 1510200 1510200 0 13049 1595 13876 32978;32979 23270 23270 1 895550 0 SPVQVILLR EADQTHAQNFSSAVKSPVQVILLRALAFLA FSSAVKSPVQVILLRALAFLACAFLLTTAL K S P L R A 0 1 0 0 0 1 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 9 0 1023.6441 Q5SNT2 Q5SNT2 210 218 TMEM201 Transmembrane protein 201 yes yes 2 0.0051036 115.49 By MS/MS 7 0 1 1 287480 287480 0 13050 1617 13877 32980 23271 23271 1 5137.4 0 SPVTFLSDLR PPQFKKDLDSYLKTRSPVTFLSDLRSNLQV YLKTRSPVTFLSDLRSNLQVSNEPGNRYNL R S P L R S 0 1 0 1 0 0 0 0 0 0 2 0 0 1 1 2 1 0 0 1 0 0 10 0 1133.6081 A5YKK6 A5YKK6 2188 2197 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.00029365 153.05 By MS/MS 2.5 0.5 1 1 2 312150 312150 0 13051 19 13878 32981;32982 23272;23273 23272 2 12563 0 SPYGGGRPGR IVRLDSQKHIDFSLRSPYGGGRPGRVKRKN DFSLRSPYGGGRPGRVKRKNAKKGQGGAGA R S P G R V 0 2 0 0 0 0 0 4 0 0 0 0 0 0 2 1 0 0 1 0 0 0 10 1 1002.4995 P46781 P46781 163 172 RPS9 40S ribosomal protein S9 yes yes 2 0.003517 122.19 By MS/MS By matching 9 0.707 1 2 1 3 1 4340200 4288600 51517 13052 887 13879 32983;32984;32985;32986 23274;23275 23274 2 2155300 555200 SPYQEFTDHLVK SYLTPDLWKETVFTKSPYQEFTDHLVKTHT FTKSPYQEFTDHLVKTHTRVSVQRTQAPAV K S P V K T 0 0 0 1 0 1 1 0 1 0 1 1 0 1 1 1 1 0 1 1 0 0 12 0 1462.7092 P15880 P15880 264 275 RPS2 40S ribosomal protein S2 yes yes 2;3 6.5213E-05 162.68 By MS/MS 8 0 2 2 13987000 13987000 0 13053 602 13880 32987;32988 23276;23277 23277 2 922710 0 SPYTVTVGQACNPSACR VHTVHVTFAGVPIPRSPYTVTVGQACNPSA YTVTVGQACNPSACRAVGRGLQPKGVRVKE R S P C R A 2 1 1 0 2 1 0 1 0 0 0 0 0 0 2 2 2 0 1 2 0 0 17 0 1866.8353 P21333 P21333 468 484 FLNA Filamin-A yes yes 2 3.3667E-43 253.97 By MS/MS 2.5 0.5 1 1 2 1528100 1528100 0 13054 648 13881 32989;32990 23278;23279 23279 2 66300 0 SQAALQK VYLVYDQELLGPSDKSQAALQKAGEVVPPA ELLGPSDKSQAALQKAGEVVPPAMYQFSQY K S Q Q K A 2 0 0 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 7 0 744.413 Q5XKP0 Q5XKP0 37 43 QIL1 Protein QIL1 yes yes 2 0.045322 104.37 By MS/MS 10 0 1 1 1588700 1588700 0 13055 1664 13882 32991 23280 23280 1 1688600 0 SQAASILTK GDVFDPHGTLSGGARSQAASILTKFQELKD LSGGARSQAASILTKFQELKDVQDELRIKE R S Q T K F 2 0 0 0 0 1 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 9 0 917.5182 O95347 O95347 669 677 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.037433 86.882 By MS/MS 3.5 0.5 1 1 2 2471700 2471700 0 13056 385 13883 32992;32993 23281 23281 1 64702 0 SQADQFCQR EADATKNKEKLEKLKSQADQFCQRLGKYRM KLEKLKSQADQFCQRLGKYRMPFAWTAIHL K S Q Q R L 1 1 0 1 1 3 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 9 0 1138.4826 Q96N67 Q96N67 382 390 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.8588E-11 218.73 By MS/MS 2 0.816 1 1 1 3 1694200 1694200 0 13057 2230 13884 32994;32995;32996 23282 23282 1 75802 0 SQAEIINALLK VAGTIWNLKDIIPCKSQAEIINALLKILSE IPCKSQAEIINALLKILSEVLGMDAGEMVI K S Q L K I 2 0 1 0 0 1 1 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1198.6921 Q7Z4Q2 Q7Z4Q2 268 278 HEATR3 HEAT repeat-containing protein 3 yes yes 2 0.0005406 141.1 By MS/MS 5 0 1 1 382170 382170 0 13058 1795 13885 32997 23283 23283 1 15709 0 SQAPTLELLQNPK TIASLKKLILEVGEKSQAPTLELLQNPKEV EKSQAPTLELLQNPKEVLTRSEIQDVNYSL K S Q P K E 1 0 1 0 0 2 1 0 0 0 3 1 0 0 2 1 1 0 0 0 0 0 13 0 1437.7827 Q9C037 Q9C037 257 269 TRIM4 E3 ubiquitin-protein ligase TRIM4 yes yes 2 1.5155E-18 257.09 By MS/MS 6.5 0.5 1 1 2 3392400 3392400 0 13059 2430 13886 32998;32999 23284 23284 1 27502 0 SQAQQPQKEAALSS EKHFRDVESQKILQRSQAQQPQKEAALSS_ RSQAQQPQKEAALSS_______________ R S Q S S - 3 0 0 0 0 4 1 0 0 0 1 1 0 0 1 3 0 0 0 0 0 0 14 1 1471.7267 Q3MHD2 Q3MHD2 182 195 LSM12 Protein LSM12 homolog yes yes 2 0.0379 103.43 By MS/MS 8.5 0.5 1 1 2 2322700 2322700 0 13060 1568 13887 33000;33001 23285 23285 1 1267800 0 SQDAEVGDGTTSVTLLAAEFLK DVVHPAAKTLVDIAKSQDAEVGDGTTSVTL DGTTSVTLLAAEFLKQVKPYVEEGLHPQII K S Q L K Q 3 0 0 2 0 1 2 2 0 0 3 1 0 1 0 2 3 0 0 2 0 0 22 0 2251.122 Q99832 Q99832 85 106 CCT7 T-complex protein 1 subunit eta yes yes 2;3 1.3231E-63 310.9 By MS/MS 6.2 0.4 4 1 5 131580000 131580000 0 13061 2295 13888 33002;33003;33004;33005;33006 23286;23287;23288;23289;23290;23291;23292 23286 7 1026500 0 SQDDAMVDYFFQR THSSPVPGSIGVAGRSQDDAMVDYFFQRQH GRSQDDAMVDYFFQRQHGEQLGGGGSGGGG R S Q Q R Q 1 1 0 3 0 2 0 0 0 0 0 0 1 2 0 1 0 0 1 1 0 0 13 0 1620.6879 Q14671 Q14671 75 87 PUM1 Pumilio homolog 1 yes yes 2 0.00022405 147.71 By MS/MS 3 0 1 1 111190 111190 0 13062 1438 13889 33007 23293;23294 23293 2 2902.6 0 SQDDRDKFLGR EVTVECKIDGSANLKSQDDRDKFLGRVMFK ANLKSQDDRDKFLGRVMFKITARA______ K S Q G R V 0 2 0 3 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 2 1335.6531 P54709 P54709 260 270 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 3 0.017856 101.35 By MS/MS 8 1.41 1 1 1 1 1 5 4675300 4675300 0 13063 1017 13890 33008;33009;33010;33011;33012 23295 23295 1 225070 0 SQDGDTAACSLIQAR LISLVELILAEAETRSQDGDTAACSLIQAR SQDGDTAACSLIQARLPLLLSCCCGDDESV R S Q A R L 3 1 0 2 1 2 0 1 0 1 1 0 0 0 0 2 1 0 0 0 0 0 15 0 1591.726 Q8N201 Q8N201 1747 1761 INTS1 Integrator complex subunit 1 yes yes 2 2.0247E-28 237.41 By MS/MS 2.5 0.5 1 1 2 632340 632340 0 13064 1903 13891 33013;33014 23296 23296 1 21575 0 SQDGSHLLK PSVRLTPTMMLYAGRSQDGSHLLKSARYLQ MLYAGRSQDGSHLLKSARYLQQELPVRIAH R S Q L K S 0 0 0 1 0 1 0 1 1 0 2 1 0 0 0 2 0 0 0 0 0 0 9 0 983.50361 O14874 O14874 81 89 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes yes 2 0.00013625 168.26 By MS/MS 7 0 1 1 1296300 1296300 0 13065 131 13892 33015 23297 23297 1 23165 0 SQDPTPPSAPQEATEGSK QSLASPPARDALQLRSQDPTPPSAPQEATE PTPPSAPQEATEGSKVTEPSAPCQALVSIG R S Q S K V 2 0 0 1 0 2 2 1 0 0 0 1 0 0 4 3 2 0 0 0 0 0 18 0 1825.833 Q9UPN7 Q9UPN7 770 787 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 2 1.224E-18 200.63 By MS/MS 3.5 0.5 1 1 2 1128200 1128200 0 13066 2851 13893 33016;33017 23298 23298 1 30733 0 SQEAQSLQQQR LQEKLSELKETVELKSQEAQSLQQQRDQYL VELKSQEAQSLQQQRDQYLGHLQQYVAAYQ K S Q Q R D 1 1 0 0 0 5 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 11 0 1301.6324 Q08379 Q08379 602 612 GOLGA2 Golgin subfamily A member 2 yes yes 2 6.7401E-22 235.01 By MS/MS 3 0 1 1 438120 438120 0 13067 1288 13894 33018 23299 23299 1 11437 0 SQELEVK TVDQVEELRRDLRIKSQELEVKNAAANDKL LRRDLRIKSQELEVKNAAANDKLKKMVKDQ K S Q V K N 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 7 0 831.4338 Q14204 Q14204 3226 3232 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.02922 115.49 By MS/MS By matching 1.33 0.471 2 1 2 1 1258200 1230100 28073 13068 1421 13895 33019;33020;33021 23300 23300 1 60455 28073 SQETECTYFSTPLLLGK AMNGKEGVVECSFVKSQETECTYFSTPLLL ETECTYFSTPLLLGKKGIEKNLGIGKVSSF K S Q G K K 0 0 0 0 1 1 2 1 0 0 3 1 0 1 1 2 3 0 1 0 0 0 17 0 1972.9452 P40926 P40926 280 296 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 1.6074E-33 245.03 By MS/MS 7.5 0.5 1 1 2 1426200 1426200 0 13069 832 13896 33022;33023 23301 23301 1 92298 0 SQEVEDKTKEYELLSDELNQK VLQALEELAVNYDQKSQEVEDKTKEYELLS KTKEYELLSDELNQKSATLASIDAELQKLK K S Q Q K S 0 0 1 2 0 2 5 0 0 0 3 3 0 0 0 2 1 0 1 1 0 0 21 2 2524.2181 P33176 P33176 506 526 KIF5B Kinesin-1 heavy chain yes yes 3 0.010936 63.69 By MS/MS 4 0 1 1 967650 967650 0 13070 767 13897 33024 23302 23302 1 26416 0 SQFTITPGSEQIR AAVAKQALAHGLKCKSQFTITPGSEQIRAT CKSQFTITPGSEQIRATIERDGYAQILRDL K S Q I R A 0 1 0 0 0 2 1 1 0 2 0 0 0 1 1 2 2 0 0 0 0 0 13 0 1462.7416 Q99798 Q99798 412 424 ACO2 Aconitate hydratase, mitochondrial yes yes 2 0.0138 132.56 By MS/MS 5 0 1 1 896760 896760 0 13071 2292 13898 33025 23303 23303 0 36860 0 SQGAAAGLR S Q L R 3 1 0 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 829.44061 REV__Q9NNZ3 yes yes 2 0.0060578 113.41 By MS/MS By matching 7.25 0.433 3 1 3 1 10112000 10095000 17769 + 13072 3045 13899 33026;33027;33028;33029 23304 23304 1 289270 72946 SQGCSEQVLTVLK SWVQSYCRLSHCRSRSQGCSEQVLTVLKTV SRSQGCSEQVLTVLKTVSLLDENNVSSYLS R S Q L K T 0 0 0 0 1 2 1 1 0 0 2 1 0 0 0 2 1 0 0 2 0 0 13 0 1447.7341 P78527 P78527 3290 3302 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.473E-18 230.81 By MS/MS 1.75 0.829 2 1 1 4 12656000 12656000 0 13073 1197 13900 33030;33031;33032;33033 23305;23306;23307;23308 23305 4 550810 0 SQHSGNAQVTQTK GFVALSKAPDGYIVKSQHSGNAQVTQTKFL VKSQHSGNAQVTQTKFLPNAPKALIVEPSR K S Q T K F 1 0 1 0 0 3 0 1 1 0 0 1 0 0 0 2 2 0 0 1 0 0 13 0 1384.6695 Q92499 Q92499 269 281 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2;3 1.0965E-17 241.35 By MS/MS By matching 5.62 0.992 1 3 2 2 7 1 2775000 2761900 13107 13074 2051 13901 33034;33035;33036;33037;33038;33039;33040;33041 23309;23310 23310 2 83864 38785 SQHYSSEK FGLFAPLVFLSSYGKSQHYSSEKSAFLLSI FLSSYGKSQHYSSEKSAFLLSILAFVDMVA K S Q E K S 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 3 0 0 1 0 0 0 8 0 964.42502 P53985 P53985 290 297 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.00071863 177.7 By MS/MS 2.5 1.12 1 1 1 1 4 1852900 1852900 0 13075 1008 13902 33042;33043;33044;33045 23311;23312 23311 2 88109 0 SQICDNAALYAQK QTDDEEEAGLLELLKSQICDNAALYAQKYD LKSQICDNAALYAQKYDEEFQRYLPRFVTA K S Q Q K Y 3 0 1 1 1 2 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 13 0 1480.698 P55060 P55060 269 281 CSE1L Exportin-2 yes yes 2 3.111E-35 267.07 By MS/MS 3.5 0.5 1 1 2 6651700 6651700 0 13076 1025 13903 33046;33047 23313 23313 1 181160 0 SQIDDLYSTIKV PTMKAKRPELRNYFRSQIDDLYSTIKV___ YFRSQIDDLYSTIKV_______________ R S Q K V - 0 0 0 2 0 1 0 0 0 2 1 1 0 0 0 2 1 0 1 1 0 0 12 1 1380.7137 P33121 P33121 687 698 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 2.133E-10 203.03 By MS/MS 5 0 1 1 958580 958580 0 13077 766 13904 33048 23314 23314 1 39401 0 SQIDVALSQDSTYQGER QPELSQDSYLGDEFKSQIDVALSQDSTYQG IDVALSQDSTYQGERAYQHGGVTGLSQY__ K S Q E R A 1 1 0 2 0 3 1 1 0 1 1 0 0 0 0 3 1 0 1 1 0 0 17 0 1895.8861 Q92900 Q92900 1100 1116 UPF1 Regulator of nonsense transcripts 1 yes yes 2 2.017E-43 260.73 By MS/MS 3 0 1 1 648950 648950 0 13078 2088 13905 33049 23315 23315 1 16941 0 SQIFSTASDNQPTVTIK MTKLIPRNTVVPTKKSQIFSTASDNQPTVT IFSTASDNQPTVTIKVYEGERPLTKDNHLL K S Q I K V 1 0 1 1 0 2 0 0 0 2 0 1 0 1 1 3 3 0 0 1 0 0 17 0 1835.9265 P11021 P11021 448 464 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 3.5472E-43 253.06 By MS/MS By MS/MS 5 1.76 1 1 1 3 1 1 1 8 1 39674000 39590000 83167 13079 545 13906 33050;33051;33052;33053;33054;33055;33056;33057;33058 23316;23317;23318;23319;23320 23320 5 1472700 246090 SQIHDIVLVGGSTR LDPVEKALRDAKLDKSQIHDIVLVGGSTRI KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1480.7998 P11142 P11142 329 342 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 4.2717E-05 155.39 By MS/MS 5.71 1.03 1 2 2 2 7 49140000 49140000 0 13080 546 13907 33059;33060;33061;33062;33063;33064;33065 23321;23322;23323 23322 3 1803300 0 SQKDQNTFQK AVLHPEFHIQFLGGKSQKDQNTFQKLLHIN FLGGKSQKDQNTFQKLLHINATALLEYPEY K S Q Q K L 0 0 1 1 0 3 0 0 0 0 0 2 0 1 0 1 1 0 0 0 0 0 10 1 1222.5942 Q969Z0 Q969Z0 444 453 TBRG4 Protein TBRG4 yes yes 2;3 0.0018298 154.84 By MS/MS 5.67 0.471 1 2 3 6898000 6898000 0 13081 2112 13908 33066;33067;33068 23324;23325 23325 2 55050 0 SQKPEAGGCGAPAAR TLPMLPWLMAEIRRRSQKPEAGGCGAPAAR SQKPEAGGCGAPAAREVILVLSAPFLRCVP R S Q A R E 4 1 0 0 1 1 1 3 0 0 0 1 0 0 2 1 0 0 0 0 0 0 15 1 1455.6889 O60343 O60343 66 80 TBC1D4 TBC1 domain family member 4 yes yes 3 0.0063885 86.498 By MS/MS 3.5 0.5 1 1 2 700050 700050 0 13082 246 13909 33069;33070 23326 23326 1 18344 0 SQLDLFDDVGTFASGPPK QVIEQETPVSAKSSRSQLDLFDDVGTFASG DLFDDVGTFASGPPKYKDNPFSLGESFGSR R S Q P K Y 1 0 0 3 0 1 0 2 0 0 2 1 0 2 2 2 1 0 0 1 0 0 18 0 1892.9156 Q8N6H7 Q8N6H7 340 357 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 2 3.4722E-69 302.63 By MS/MS 6 0 1 1 481080 481080 0 13083 1928 13910 33071 23327 23327 1 3751.5 0 SQLEAIFLR GTSLLVTQNGRGGLRSQLEAIFLRDWDSPY GRGGLRSQLEAIFLRDWDSPYSHDLDTSAD R S Q L R D 1 1 0 0 0 1 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 9 0 1075.6026 Q8IV08 Q8IV08 458 466 PLD3 Phospholipase D3 yes yes 2 0.0023784 130.66 By MS/MS 5.5 0.5 1 1 2 454290 454290 0 13084 1856 13911 33072;33073 23328 23328 1 11101 0 SQLEESISQLR YSVPEGQSKYVEEARSQLEESISQLRHYCE EEARSQLEESISQLRHYCEPYTTWCQETYS R S Q L R H 0 1 0 0 0 2 2 0 0 1 2 0 0 0 0 3 0 0 0 0 0 0 11 0 1288.6623 Q9BUR5 Q9BUR5 58 68 APOO Apolipoprotein O yes yes 2 8.3408E-05 164.33 By MS/MS 9.5 0.5 1 1 2 262380 262380 0 13085 2367 13912 33074;33075 23329 23329 1 239710 0 SQLGAHHTTPVGDGAAGTR ______________________________ AHHTTPVGDGAAGTRGLAAPGSRDHQKEKS R S Q T R G 3 1 0 1 0 1 0 4 2 0 1 0 0 0 1 1 3 0 0 1 0 0 19 0 1831.8925 Q5BJD5 Q5BJD5 10 28 TMEM41B Transmembrane protein 41B yes yes 3 0.0012932 99.313 By MS/MS 8 0 1 1 2556300 2556300 0 13086 1597 13913 33076 23330 23330 1 168640 0 SQLLSYIDR GNINICLMGDPGVAKSQLLSYIDRLAPRSQ DPGVAKSQLLSYIDRLAPRSQYTTGRGSSG K S Q D R L 0 1 0 1 0 1 0 0 0 1 2 0 0 0 0 2 0 0 1 0 0 0 9 0 1093.5768 P33993 P33993 388 396 MCM7 DNA replication licensing factor MCM7 yes yes 2 4.6117E-06 179.1 By MS/MS 5.5 1.12 1 1 1 1 4 14778000 14778000 0 13087 775 13914 33077;33078;33079;33080 23331;23332 23331 2 417620 0 SQLNDISSFK CDCTEKLQNKFDFLRSQLNDISSFKNIYRY FDFLRSQLNDISSFKNIYRYAFDFARDKDQ R S Q F K N 0 0 1 1 0 1 0 0 0 1 1 1 0 1 0 3 0 0 0 0 0 0 10 0 1137.5666 Q9BTE7 Q9BTE7 130 139 DCUN1D5 DCN1-like protein 5 yes yes 2 0.0011512 132.25 By MS/MS 9.5 0.5 1 1 2 1147300 1147300 0 13088 2351 13915 33081;33082 23333 23333 1 684720 0 SQLQISNNR SEADSDKNATILELRSQLQISNNRTLELQG TILELRSQLQISNNRTLELQGLINDLQRER R S Q N R T 0 1 2 0 0 2 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 9 0 1058.5469 P15924 P15924 1754 1762 DSP Desmoplakin yes yes 2 0.0021123 128.6 By MS/MS 1.5 0.5 1 1 2 335280 335280 0 13089 603 13916 33083;33084 23334 23334 1 16629 0 SQLSCVVVDDIER AKCQAMKKIFDDAYKSQLSCVVVDDIERLL YKSQLSCVVVDDIERLLDYVPIGPRFSNLV K S Q E R L 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 0 0 13 0 1518.7348 P46459 P46459 595 607 NSF Vesicle-fusing ATPase yes yes 2 1.0059E-34 258.65 By MS/MS 7 1.41 1 1 1 1 1 5 16473000 16473000 0 13090 881 13917 33085;33086;33087;33088;33089 23335;23336 23335 2 817440 0 SQLTTIVLAAR VQALTLTFLAEWGDRSQLTTIVLAAREDPY WGDRSQLTTIVLAAREDPYGVAVGGTVGHC R S Q A R E 2 1 0 0 0 1 0 0 0 1 2 0 0 0 0 1 2 0 0 1 0 0 11 0 1171.6925 Q9HC07 Q9HC07 253 263 TMEM165 Transmembrane protein 165 yes yes 2 1.6025E-16 228.98 By MS/MS 4.17 2.91 1 1 1 1 1 1 6 3458900 3458900 0 13091 2555 13918 33090;33091;33092;33093;33094;33095 23337;23338;23339;23340 23337 4 574080 0 SQMLAMNIEK PYQQVIEKTKSLSFRSQMLAMNIEKKLNQN SLSFRSQMLAMNIEKKLNQNSRSEAPNWAT R S Q E K K 1 0 1 0 0 1 1 0 0 1 1 1 2 0 0 1 0 0 0 0 0 0 10 0 1163.5679 P60228 P60228 415 424 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00014303 160.77 By MS/MS 6.5 0.5 1 1 2 5198100 5198100 0 13092 1065 13919 33096;33097 23341 23341 1 44995 0 SQNPHGLK ______________________________ ______________________________ R S Q L K Q 0 0 1 0 0 1 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 8 0 879.45626 Q13616 Q13616 6 13 CUL1 Cullin-1 yes yes 2 0.054049 89.752 By MS/MS 4.5 0.5 1 1 2 365420 365420 0 13093 1387 13920 33098;33099 23342 23342 1 12405 0 SQNTVWSVIK LQTMYEMETSGKIAKSQNTVWSVIKSILRK GKIAKSQNTVWSVIKSILRKDGPLGFYHGL K S Q I K S 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 2 1 1 0 2 0 0 10 0 1160.619 Q9Y619 Q9Y619 149 158 SLC25A15 Mitochondrial ornithine transporter 1 yes yes 2 4.2081E-07 217.66 By MS/MS 8.5 0.5 1 1 2 1721900 1721900 0 13094 2994 13921 33100;33101 23343 23343 1 189010 0 SQNVMAAASIANIVK PLSVFGDRSTGETIRSQNVMAAASIANIVK SQNVMAAASIANIVKSSLGPVGLDKMLVDD R S Q V K S 4 0 2 0 0 1 0 0 0 2 0 1 1 0 0 2 0 0 0 2 0 0 15 0 1515.8079 P17987 P17987 19 33 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 3.6248E-77 346.65 By MS/MS By MS/MS 5.25 2.49 1 1 1 1 2 4 1 1 11 1 137540000 137440000 104610 13095 619 13922;13923 33102;33103;33104;33105;33106;33107;33108;33109;33110;33111;33112;33113 23344;23345;23346;23347;23348;23349;23350;23351;23352;23353 23349 410 10 2811100 320830 SQPAILLLTAAR SQTFLEKHLNSSHPRSQPAILLLTAARDAE HPRSQPAILLLTAARDAEEALRCLSEQIAD R S Q A R D 3 1 0 0 0 1 0 0 0 1 3 0 0 0 1 1 1 0 0 0 0 0 12 0 1252.7503 Q5JTV8 Q5JTV8 405 416 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 9.3833E-33 252.97 By MS/MS 7 0.816 1 1 1 3 7926200 7926200 0 13096 1610 13924 33114;33115;33116 23354;23355 23354 2 75196 0 SQPEPSPVLSQLSQR PPTSQSSVLSHLDFKSQPEPSPVLSQLSQR SQPEPSPVLSQLSQRQQHQSQAVTVPPPGL K S Q Q R Q 0 1 0 0 0 3 1 0 0 0 2 0 0 0 3 4 0 0 0 1 0 0 15 0 1651.8529 Q5T6F2 Q5T6F2 427 441 UBAP2 Ubiquitin-associated protein 2 yes yes 2 0.047175 67.952 By MS/MS 3 0 1 1 875260 875260 0 13097 1630 13925 33117 23356 23356 1 22849 0 SQPFTLQDLEK YCLNRMSMKTSSWTRSQPFTLQDLEKIMQS SWTRSQPFTLQDLEKIMQSPSPENLKFNAV R S Q E K I 0 0 0 1 0 2 1 0 0 0 2 1 0 1 1 1 1 0 0 0 0 0 11 0 1304.6612 Q9NU22 Q9NU22 2478 2488 MDN1 Midasin yes yes 2 0.0031797 116.84 By MS/MS 1 0 1 1 1014700 1014700 0 13098 2635 13926 33118 23357 23357 1 49575 0 SQQALVQK QASIQHIQNAIDTEKSQQALVQKRHYLFDV NAIDTEKSQQALVQKRHYLFDVQRNNIAMA K S Q Q K R 1 0 0 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 8 0 900.50288 P24539 P24539 155 162 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.0029465 166.68 By MS/MS By matching 9.33 0.471 2 1 2 1 5603000 5534200 68794 13099 678 13927 33119;33120;33121 23358 23358 1 3207900 741400 SQQALVQKR QASIQHIQNAIDTEKSQQALVQKRHYLFDV AIDTEKSQQALVQKRHYLFDVQRNNIAMAL K S Q K R H 1 1 0 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1056.604 P24539 P24539 155 163 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2;3 1.4187E-10 214.64 By MS/MS By matching 9 0 4 2 2 5299300 5240400 58941 13100 678 13928 33122;33123;33124;33125 23359;23360 23359 2 3007500 635220 SQQELEAK VKLPTSAPRPTRFLRSQQELEAKLEQQQSA RPTRFLRSQQELEAKLEQQQSAGGDAEGGG R S Q A K L 1 0 0 0 0 2 2 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 931.46108 Q14008 Q14008 234 241 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.0019191 158.07 By MS/MS 2 0 1 1 1552300 1552300 0 13101 1405 13929 33126 23361 23361 1 77159 0 SQSAAVTPSSTTSSTR GSSGPPGSSSSSSSRSQSAAVTPSSTTSST QSAAVTPSSTTSSTRATPAPSAPAAASATS R S Q T R A 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 6 4 0 0 1 0 0 16 0 1566.7485 Q16186 Q16186 211 226 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 3.1597E-08 193.51 By MS/MS By matching 7.33 0.471 2 1 2 1 7404100 7359200 44807 13102 1531 13930 33127;33128;33129 23362 23362 1 158590 183940 SQSFFAAAR LLQEEEQERRRPQSRSQSFFAAARAAVSAF RRPQSRSQSFFAAARAAVSAFPTDSLERDL R S Q A R A 3 1 0 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 9 0 983.48248 O14654 O14654 1089 1097 IRS4 Insulin receptor substrate 4 yes yes 2 6.9832E-08 196.99 By MS/MS 2 1 1 1 2 1880500 1880500 0 13103 118 13931 33130;33131 23363;23364 23364 2 54397 0 SQSSDTEQQSPTSGGGK KENAWVKRSSNPPARSQSSDTEQQSPTSGG SSDTEQQSPTSGGGKVAPAQPSEEGPGRKD R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 P23588 P23588 495 511 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 1.2817E-55 286.09 By MS/MS By MS/MS 5.8 0.748 2 2 1 2 3 1991200 1375000 616130 13104 672 13932 33132;33133;33134;33135;33136 23365;23366;23367;23368;23369 23369 5 25706 1849500 SQSTAQNLTSDIQR MMQDDLNFKSTEVQKSQSTAQNLTSDIQRL KSQSTAQNLTSDIQRLQLDLQKMELLESKM K S Q Q R L 1 1 1 1 0 3 0 0 0 1 1 0 0 0 0 3 2 0 0 0 0 0 14 0 1547.754 Q96LB3 Q96LB3 435 448 IFT74 Intraflagellar transport protein 74 homolog yes yes 2 5.4318E-35 255.54 By MS/MS 5 0 1 1 1041800 1041800 0 13105 2226 13933 33137 23370 23370 1 42824 0 SQTEAVTFLANHDDSR QVLIDARDCPHISQRSQTEAVTFLANHDDS QTEAVTFLANHDDSRALYAIPGLDYVSHED R S Q S R A 2 1 1 2 0 1 1 0 1 0 1 0 0 1 0 2 2 0 0 1 0 0 16 0 1789.8231 Q9Y2S7 Q9Y2S7 150 165 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 3.6686E-63 291.2 By MS/MS 7.5 0.5 1 1 2 2994600 2994600 0 13106 2900 13934 33138;33139 23371;23372 23371 2 118330 0 SQTGVGELTTQNTR YTELEYIHALTLLHRSQTGVGELTTQNTRL RSQTGVGELTTQNTRLQRLKEIICEQAAIK R S Q T R L 0 1 1 0 0 2 1 2 0 0 1 0 0 0 0 1 4 0 0 1 0 0 14 0 1490.7325 Q96A65 Q96A65 935 948 EXOC4 Exocyst complex component 4 yes yes 2 3.6041E-59 296.28 By MS/MS 4 0 1 1 2345800 2345800 0 13107 2118 13935 33140 23373 23373 1 64036 0 SQTLIDLNR QLEQDSGKSLHDNLRSQTLIDLNRAGVGLL LHDNLRSQTLIDLNRAGVGLLEVVLEPDMS R S Q N R A 0 1 1 1 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1058.572 O75879 O75879 204 212 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 2 3.7068E-06 182.39 By MS/MS 6 1.41 1 1 1 1 1 5 9523100 9523100 0 13108 333 13936 33141;33142;33143;33144;33145 23374 23374 1 102990 0 SQVDKLTLTSR VNQGHCHPKIVNALKSQVDKLTLTSRAFYN NALKSQVDKLTLTSRAFYNNVLGEYEEYIT K S Q S R A 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 11 1 1246.6881 P04181 P04181 103 113 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2;3 0.0036665 142.89 By MS/MS 6.5 0.5 2 2 4 6846900 6846900 0 13109 447 13937 33146;33147;33148;33149 23375;23376 23375 2 106010 0 SQVFSTAADGQTQVEIK FTKLINRNTTIPTKKSQVFSTAADGQTQVE VFSTAADGQTQVEIKVCQGEREMAGDNKLL K S Q I K V 2 0 0 1 0 3 1 1 0 1 0 1 0 1 0 2 2 0 0 2 0 0 17 0 1807.8952 P38646 P38646 469 485 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.8302E-115 355.89 By MS/MS By MS/MS 5.4 0.49 3 2 4 1 20054000 20012000 41744 13110 820 13938 33150;33151;33152;33153;33154 23377;23378;23379;23380 23378 4 647970 123520 SQWYELQQLDSK ______________________________ ______________________________ M S Q S K F 0 0 0 1 0 3 1 0 0 0 2 1 0 0 0 2 0 1 1 0 0 0 12 0 1523.7256 P42224 P42224 2 13 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 2 5.0128E-18 232.17 By MS/MS 5 0 1 1 436260 436260 0 13111 847 13939 33155 23381 23381 1 17932 0 SQYEQLAEQNR AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NNMRSQYEQLAEQNRKDAEAWFNEKSKELT R S Q N R K 1 1 1 0 0 3 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 1364.6321 CON__P13645;P13645 CON__P13645 323 333 KRT10 Keratin, type I cytoskeletal 10 yes no 2 2.3035E-61 313.89 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 12500000 7186100 5313700 + 13112 49 13940 33156;33157;33158;33159;33160;33161;33162;33163;33164;33165;33166;33167;33168;33169;33170;33171;33172;33173;33174 23382;23383;23384;23385;23386;23387;23388;23389;23390;23391;23392;23393;23394;23395;23396;23397;23398;23399;23400;23401 23399 20 1144000 19191000 SQYEQLAEQNRK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NMRSQYEQLAEQNRKDAEAWFNEKSKELTT R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 12 1 1492.727 CON__P13645;P13645 CON__P13645 323 334 KRT10 Keratin, type I cytoskeletal 10 yes no 2 1.1457E-43 285.88 By MS/MS By MS/MS 5.61 2.89 2 1 2 2 2 2 1 2 2 2 9 9 36456000 25650000 10806000 + 13113 49 13941 33175;33176;33177;33178;33179;33180;33181;33182;33183;33184;33185;33186;33187;33188;33189;33190;33191;33192 23402;23403;23404;23405;23406;23407;23408;23409;23410;23411;23412;23413;23414;23415;23416;23417;23418 23415 17 2924600 42609000 SQYNFIADVVEK AVLAAVPSPPPASPRSQYNFIADVVEKTAP SPRSQYNFIADVVEKTAPAVVYIEILDRHP R S Q E K T 1 0 1 1 0 1 1 0 0 1 0 1 0 1 0 1 0 0 1 2 0 0 12 0 1411.6983 O43464 O43464 145 156 HTRA2 Serine protease HTRA2, mitochondrial yes yes 2 1.3378E-17 232.17 By MS/MS 8 0 1 1 1609600 1609600 0 13114 202 13942 33193 23419 23419 1 106190 0 SQYPEIIFLGTGSAIPMK YRRSAQDGPAPAEKRSQYPEIIFLGTGSAI PEIIFLGTGSAIPMKIRNVSATLVNISPDT R S Q M K I 1 0 0 0 0 1 1 2 0 3 1 1 1 1 2 2 1 0 1 0 0 0 18 0 1951.0125 Q9BQ52 Q9BQ52 478 495 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.0091091 79.885 By MS/MS 4 0 1 1 226270 226270 0 13115 2305 13943 33194 23420 23420 1456 1 6177.1 0 SQYTTGR AKSQLLSYIDRLAPRSQYTTGRGSSGVGLT YIDRLAPRSQYTTGRGSSGVGLTAAVLRDS R S Q G R G 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 1 0 0 0 7 0 811.38243 P33993 P33993 401 407 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.032107 113.5 By MS/MS 5.5 0.5 1 1 2 2520400 2520400 0 13116 775 13944 33195;33196 23421 23421 1 79312 0 SRDSDESGDKTTR DQDSSHSSVTTVKARSRDSDESGDKTTRSS ARSRDSDESGDKTTRSSSQYIESFWQSSQS R S R T R S 0 2 0 3 0 0 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 0 13 2 1452.6441 Q5JTV8 Q5JTV8 239 251 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2;3 1.0326E-06 184.98 By MS/MS By matching 5.75 0.433 1 3 3 1 2233100 2229300 3846.6 13117 1610 13945 33197;33198;33199;33200 23422;23423 23423 2 18250 11797 SREREQIK QPLNVEIDPEIQKVKSREREQIKSLNNQFA PEIQKVKSREREQIKSLNNQFASFIDKVRF K S R I K S 0 2 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 8 2 1044.5676 P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 178 185 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.033246 105.14 By MS/MS 10 0 1 1 243640 243640 0 + 13118 450;45;32 13946 33201 23424 23424 1 258970 0 SRERPSQPEGLR TPATKRSFSKEVEERSRERPSQPEGLRKAA EERSRERPSQPEGLRKAASLTEDRDRGRDA R S R L R K 0 3 0 0 0 1 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 12 2 1410.7328 Q04637 Q04637 1194 1205 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.039383 88.056 By MS/MS 1.67 0.471 1 2 3 1333800 1333800 0 13119 1264 13947 33202;33203;33204 23425;23426 23426 1 66211 0 SRIESEVRR ITQVDKLSEDIDLLKSRIESEVRRDLHVST DIDLLKSRIESEVRRDLHVSTGEFTDLKQQ K S R R R D 0 3 0 0 0 0 2 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 9 2 1130.6156 O43264 O43264 75 83 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 3 0.025255 94.309 By MS/MS 4 0 1 1 391010 391010 0 13120 189 13948 33205 23427 23427 1 10674 0 SRLDQELK VCRKTYVTPRRPFEKSRLDQELKLIGEYGL PRRPFEKSRLDQELKLIGEYGLRNKREVWR K S R L K L 0 1 0 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 1 987.53491 P46781 P46781 23 30 RPS9 40S ribosomal protein S9 yes yes 3 0.002754 131.62 By MS/MS 9.5 0.5 1 1 2 2182600 2182600 0 13121 887 13949 33206;33207 23428 23428 1 1269800 0 SRPETGRPR YLHLPPEIVPATLRRSRPETGRPRPKGLEG PATLRRSRPETGRPRPKGLEGERPARLTRG R S R P R P 0 3 0 0 0 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 0 9 2 1054.5632 P46783;Q9NQ39 P46783 97 105 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 3 0.0067221 105.2 By MS/MS By matching 9 0 2 1 1 5174500 5106500 68026 13122 889 13950 33208;33209 23429 23429 1 2930700 733130 SRPNASGGAACSGPGPEPAVFCEPVVK LKGHAKAAAAKKSRKSRPNASGGAACSGPG GPGPEPAVFCEPVVKLYYREEAVAEDVLNV K S R V K L 4 1 1 0 2 0 2 4 0 0 0 1 0 1 5 3 0 0 0 3 0 0 27 1 2697.2639 Q6L8Q7 Q6L8Q7 98 124 PDE12 2,5-phosphodiesterase 12 yes yes 3 0.00040906 70.465 By MS/MS 5 0 1 1 2375500 2375500 0 13123 1687 13951 33210 23430 23430 1 97643 0 SRPSSVSPR ______________________________ ______________________________ M S R P R Q 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 9 1 971.51484 Q9H6S0 Q9H6S0 2 10 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.052061 97.565 By MS/MS 3 0 1 1 604660 604660 0 13124 2511 13952 33211 23431 23431 1 15785 0 SRQFSSR ______________________________ ______________________________ M S R S R S 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 7 1 866.43586 P04264;CON__P04264 P04264 2 8 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.018298 171.38 By MS/MS By MS/MS 5.91 3.12 2 1 1 1 2 1 2 1 5 6 23764000 8911400 14852000 + 13125 450;45 13953 33212;33213;33214;33215;33216;33217;33218;33219;33220;33221;33222 23432;23433;23434;23435 23435 3 731570 46862000 SRQFSSRSGYR ______________________________ ______________________________ M S R Y R S 0 3 0 0 0 1 0 1 0 0 0 0 0 1 0 4 0 0 1 0 0 0 11 2 1329.6538 P04264;CON__P04264 P04264 2 12 KRT1 Keratin, type II cytoskeletal 1 no no 3 0.019116 66.262 By MS/MS 2.5 1.12 1 1 1 1 4 1553500 0 1553500 + 13126 450;45 13954 33223;33224;33225;33226 23436 23436 1 0 1623600 SRQSSVSFR ______________________________ ______________________________ M S R F R S 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 4 0 0 0 1 0 0 9 1 1052.5363 CON__P13647;P13647 CON__P13647 2 10 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.0014434 153.05 By MS/MS 1 0 1 1 569940 0 569940 + 13127 50 13955 33227 23437 23437 1 0 569940 SRQSSVSFRSGGSR ______________________________ MSRQSSVSFRSGGSRSFSTASAITPSVSRT M S R S R S 0 3 0 0 0 1 0 2 0 0 0 0 0 1 0 6 0 0 0 1 0 0 14 2 1496.7444 CON__P13647;P13647 CON__P13647 2 15 KRT5 Keratin, type II cytoskeletal 5 no no 3 0.020034 68.171 By MS/MS 3 1.41 1 1 1 1 1 5 566360 0 566360 + 13128 50 13956 33228;33229;33230;33231;33232 23438 23438 1 0 647350 SRTEAESWYQTK IIAEVKAQYEEIANRSRTEAESWYQTKYEE ANRSRTEAESWYQTKYEELQQTAGRHGDDL R S R T K Y 1 1 0 0 0 1 2 0 0 0 0 1 0 0 0 2 2 1 1 0 0 0 12 1 1484.6896 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 353 364 KRT5 Keratin, type II cytoskeletal 5 no no 3 0.0076626 89.44 By MS/MS 4.25 1.48 1 1 1 1 4 322060 0 322060 + 13129 50;61 13957 33233;33234;33235;33236 23439 23439 1 0 531990 SRTGSESSQTGTSTTSSR RHPSWRSEETQERERSRTGSESSQTGTSTT GSESSQTGTSTTSSRNARRRESEKSLENET R S R S R N 0 2 0 0 0 1 1 2 0 0 0 0 0 0 0 7 5 0 0 0 0 0 18 1 1815.8195 P23588 P23588 418 435 EIF4B Eukaryotic translation initiation factor 4B yes yes 3 8.278E-05 127.97 By MS/MS By MS/MS 5.8 0.748 2 2 1 3 2 1297100 1029300 267770 13130 672 13958 33237;33238;33239;33240;33241 23440;23441 23440 2 33794 793750 SRVVHQNHGER GAPVGGHILSYLLEKSRVVHQNHGERNFHI LLEKSRVVHQNHGERNFHIFYQLLEGGEEE K S R E R N 0 2 1 0 0 1 1 1 2 0 0 0 0 0 0 1 0 0 0 2 0 0 11 1 1317.665 O00159 O00159 225 235 MYO1C Unconventional myosin-Ic yes yes 3 0.010918 69.261 By MS/MS 4 0 1 1 66254 66254 0 13131 72 13959 33242 23442 23442 1 1808.7 0 SSACFTLQELK AFGPDGVQGFEALLKSSACFTLQELKLNNC ALLKSSACFTLQELKLNNCGMGIGGGKILA K S S L K L 1 0 0 0 1 1 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 11 0 1282.6227 P46060 P46060 138 148 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 3.318E-22 243.65 By MS/MS 5.5 1.12 1 1 1 1 4 8551700 8551700 0 13132 876 13960 33243;33244;33245;33246 23443 23443 1 251280 0 SSAGDTEFVHQNSQEIQR VRDEFEELDSVPLVKSSAGDTEFVHQNSQE GDTEFVHQNSQEIQRSSQDEMVSTKQQNNT K S S Q R S 1 1 1 1 0 3 2 1 1 1 0 0 0 1 0 3 1 0 0 1 0 0 18 0 2031.9246 O43164 O43164 241 258 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 3 0.012347 73.208 By MS/MS 3 0 1 1 820690 820690 0 13133 184 13961 33247 23444 23444 1 21424 0 SSALASK SEQYYIIEVNARLSRSSALASKATGYPLAY EVNARLSRSSALASKATGYPLAYVAAKLAL R S S S K A 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 3 0 0 0 0 0 0 7 0 662.3599 P27708;P31327 P27708 690 696 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial no no 2 0.050113 101.33 By MS/MS 1 0 1 1 210720 210720 0 13134 709;752 13962 33248 23445 23445 1 10295 0 SSANVEEAFFTLAR LAIDYGIKFLETSAKSSANVEEAFFTLARD KSSANVEEAFFTLARDIMTKLNRKMNDSNS K S S A R D 3 1 1 0 0 0 2 0 0 0 1 0 0 2 0 2 1 0 0 1 0 0 14 0 1540.7522 Q92930 Q92930 154 167 RAB8B Ras-related protein Rab-8B yes yes 2 0.0050516 120.59 By MS/MS 9 0 1 1 65606 65606 0 13135 2091 13963 33249 23446;23447 23447 2 37652 0 SSAQDPQAVLGALGR IPAACGATLPALGLRSSAQDPQAVLGALGR SSAQDPQAVLGALGRALSPLEEWLRLHTYL R S S G R A 3 1 0 1 0 2 0 2 0 0 2 0 0 0 1 2 0 0 0 1 0 0 15 0 1468.7634 P26640 P26640 123 137 VARS Valine--tRNA ligase yes yes 2 4.9359E-21 229.56 By MS/MS 5.5 2.69 1 1 1 1 4 3507600 3507600 0 13136 699 13964 33250;33251;33252;33253 23448;23449;23450;23451 23448 4 289080 0 SSAQGKPLALK GGKILAAALTECHRKSSAQGKPLALKVFVA CHRKSSAQGKPLALKVFVAGRNRLENDGAT K S S L K V 2 0 0 0 0 1 0 1 0 0 2 2 0 0 1 2 0 0 0 0 0 0 11 1 1098.6397 P46060 P46060 173 183 RANGAP1 Ran GTPase-activating protein 1 yes yes 3 0.042158 73.841 By MS/MS 5.5 0.5 1 1 2 1712000 1712000 0 13137 876 13965 33254;33255 23452 23452 1 44645 0 SSASAPDVDDPEAFPALA RGRGGRPNRGSRTDKSSASAPDVDDPEAFP SAPDVDDPEAFPALA_______________ K S S L A - 5 0 0 3 0 0 1 0 0 0 1 0 0 1 3 3 0 0 0 1 0 0 18 0 1758.7948 Q8NC51 Q8NC51 391 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.0013797 114.86 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 6278600 6198500 80115 13138 1949 13966 33256;33257;33258;33259;33260;33261 23453;23454 23453 2 129920 245710 SSASQAGAAAGQGAPAPAPASQEPLPIAGPATAPAPR AAAVSTQAMHNGSPKSSASQAGAAAGQGAP EPLPIAGPATAPAPRPLGSIQRPNSFLFRS K S S P R P 13 1 0 0 0 3 1 4 0 1 1 0 0 0 8 4 1 0 0 0 0 0 37 0 3290.6644 O75427 O75427 460 496 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 3 0.00177 46.175 By MS/MS 5 0 1 1 1573000 1573000 0 13139 308 13967 33262 23455 23455 1 64658 0 SSASSLNR GSSGGAKASETDALRSSASSLNRFSALQPP SETDALRSSASSLNRFSALQPPAPSGSTPS R S S N R F 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 8 0 820.40389 O43432 O43432 1093 1100 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0023248 155 By MS/MS 2 0 1 1 472250 472250 0 13140 200 13968 33263 23456 23456 1 23473 0 SSAVVVDAIPVFLEK HACRALTYMMEALPRSSAVVVDAIPVFLEK SSAVVVDAIPVFLEKLQVIQCIDVAEQALT R S S E K L 2 0 0 1 0 0 1 0 0 1 1 1 0 1 1 2 0 0 0 4 0 0 15 0 1572.8763 Q14669 Q14669 515 529 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 1.8079E-14 206.1 By MS/MS 3 0 1 1 274620 274620 0 13141 1437 13969 33264 23457 23457 1 7169.1 0 SSAYESLMEIVK LETTDRPDGHQNNLRSSAYESLMEIVKNSA NLRSSAYESLMEIVKNSAKDCYPAVQKTTL R S S V K N 1 0 0 0 0 0 2 0 0 1 1 1 1 0 0 3 0 0 1 1 0 0 12 0 1355.6643 Q14974 Q14974 526 537 KPNB1 Importin subunit beta-1 yes yes 2 4.5574E-05 162.38 By MS/MS 4 0 1 1 1776100 1776100 0 13142 1452 13970 33265 23458 23458 1142 1 48485 0 SSCSEFSK YGEDPSNAMPVIFGKSSCSEFSKEAYTAVV MPVIFGKSSCSEFSKEAYTAVVYHNRSPDF K S S S K E 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 4 0 0 0 0 0 0 8 0 930.3753 Q96N67 Q96N67 606 613 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0089976 122.19 By MS/MS 2 0 1 1 731290 731290 0 13143 2230 13971 33266 23459 23459 1 36349 0 SSDASTAQPPESQPLPASQTPASNQPK DGTGWASKQEQSDPKSSDASTAQPPESQPL QPLPASQTPASNQPKRPPAAPENTPLVPSG K S S P K R 4 0 1 1 0 4 1 0 0 0 1 1 0 0 6 6 2 0 0 0 0 0 27 0 2720.2889 P48634 P48634 97 123 PRRC2A Protein PRRC2A yes yes 3 0.00071489 64.547 By MS/MS 2 0 1 1 386220 386220 0 13144 907 13972 33267 23460 23460 1 19197 0 SSDEAVILCK NVALTFLEKTREKVKSSDEAVILCKTAIGA REKVKSSDEAVILCKTAIGALKLNIGDLQV K S S C K T 1 0 0 1 1 0 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1120.5434 Q9UNM6 Q9UNM6 106 115 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 6.4941E-06 181.55 By MS/MS 7 0 1 1 0 0 0 13145 2845 13973 33268 23461 23461 1 0 0 SSDILSVLK VTLVVDVNQCLEGKKSSDILSVLKSSTSNA CLEGKKSSDILSVLKSSTSNANDIIPECAD K S S L K S 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 3 0 0 0 1 0 0 9 0 960.54916 Q13576 Q13576 554 562 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.0012339 138.06 By MS/MS 3 0 1 1 536220 536220 0 13146 1383 13974 33269 23462 23462 1 13998 0 SSDPLGDTASNLGSAVDELMR VLLSPDYLPAMRRRRSSDPLGDTASNLGSA DTASNLGSAVDELMRHQPTLKTDATTAIIK R S S M R H 2 1 1 3 0 0 1 2 0 0 3 0 1 0 1 4 1 0 0 1 0 0 21 0 2133.9848 Q7Z6Z7 Q7Z6Z7 648 668 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00033508 103.13 By MS/MS 1.5 0.5 1 1 2 180590 180590 0 13147 1803 13975 33270;33271 23463;23464 23463 1267 2 8963.4 0 SSEAVIWEVLR LLMVLLSIIFMNGNRSSEAVIWEVLRKLGL NGNRSSEAVIWEVLRKLGLRPGIHHSLFGD R S S L R K 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 1 0 2 0 0 11 0 1287.6823 Q9UNF1 Q9UNF1 386 396 MAGED2 Melanoma-associated antigen D2 yes yes 2 7.1155E-05 166.19 By MS/MS 5 0 1 1 478510 478510 0 13148 2840 13976 33272 23465 23465 1 19669 0 SSEELLSALQK MTQEQIQKEYDALVKSSEELLSALQKKKQQ ALVKSSEELLSALQKKKQQEEEAERLRRIQ K S S Q K K 1 0 0 0 0 1 2 0 0 0 3 1 0 0 0 3 0 0 0 0 0 0 11 0 1203.6347 Q9UM54 Q9UM54 905 915 MYO6 Unconventional myosin-VI yes yes 2 3.6491E-07 214.05 By MS/MS 3 0 1 1 1291600 1291600 0 13149 2833 13977 33273 23466 23466 1 33717 0 SSEGSLGGQNSGIGGR DHPLNHRQLSLSSSRSSEGSLGGQNSGIGG SEGSLGGQNSGIGGRSSEKPTGLWSTASSQ R S S G R S 0 1 1 0 0 1 1 6 0 1 1 0 0 0 0 4 0 0 0 0 0 0 16 0 1461.6808 Q9UGP4 Q9UGP4 239 254 LIMD1 LIM domain-containing protein 1 yes yes 2 3.8417E-21 227.06 By MS/MS By matching 5 0 2 1 1 1335700 1320800 14892 13150 2774 13978 33274;33275 23467 23467 1 54290 44066 SSEHVHSQGR IPPEVQRIVKVKGKRSSEHVHSQGRVMGDR VKGKRSSEHVHSQGRVMGDRSVLYKSLNPN R S S G R V 0 1 0 0 0 1 1 1 2 0 0 0 0 0 0 3 0 0 0 1 0 0 10 0 1122.5166 Q8N766 Q8N766 715 724 EMC1 ER membrane protein complex subunit 1 yes yes 2;3 0.025986 88.496 By MS/MS 2 0.707 1 2 1 4 94148 94148 0 13151 1931 13979 33276;33277;33278;33279 23468;23469 23468 2 4369.2 0 SSENGALPVVSVVR RHGYIFSSLAGCLMKSSENGALPVVSVVRE KSSENGALPVVSVVRETESQLLPDVGAIVT K S S V R E 1 1 1 0 0 0 1 1 0 0 1 0 0 0 1 3 0 0 0 4 0 0 14 0 1412.7623 Q9Y3B2 Q9Y3B2 44 57 EXOSC1 Exosome complex component CSL4 yes yes 2 0.00082169 126.83 By MS/MS 9 0 1 1 385190 385190 0 13152 2924 13980 33280 23470 23470 1 221070 0 SSENPNEVFR EFFLHLINMVERNCRSSENPNEVFRFLVEE ERNCRSSENPNEVFRFLVEEKIKCLATEKV R S S F R F 0 1 2 0 0 0 2 0 0 0 0 0 0 1 1 2 0 0 0 1 0 0 10 0 1177.5364 P45974 P45974 453 462 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.00015166 159.79 By MS/MS 4.5 1.12 1 1 1 1 4 2396700 2396700 0 13153 873 13981 33281;33282;33283;33284 23471 23471 1 50024 0 SSENQGTVER PTYHDMLPAFMCSPKSSENQGTVERGSFPL MCSPKSSENQGTVERGSFPLPQLRLEPRVP K S S E R G 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 10 0 1105.5 Q5JSZ5 Q5JSZ5 291 300 PRRC2B Protein PRRC2B yes yes 2 0.0003193 152.04 By MS/MS 1.5 0.5 1 1 2 209390 209390 0 13154 1608 13982 33285;33286 23472 23472 1 10392 0 SSEPVQLTEAETEYFVR LAAIPEFLNIGPLFKSSEPVQLTEAETEYF EPVQLTEAETEYFVRCIKHMFTNHIVFQFD K S S V R C 1 1 0 0 0 1 4 0 0 0 1 0 0 1 1 2 2 0 1 2 0 0 17 0 1983.9426 Q9UBF2 Q9UBF2 630 646 COPG2 Coatomer subunit gamma-2 yes yes 2 4.7018E-69 304.08 By MS/MS 4.5 0.5 1 1 2 3425300 3425300 0 13155 2748 13983 33287;33288 23473;23474 23474 2 118810 0 SSEQILATLK ILTGGADKNVVVFDKSSEQILATLKGHTKK VVFDKSSEQILATLKGHTKKVTSVVFHPSQ K S S L K G 1 0 0 0 0 1 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 10 0 1088.6077 Q9UMS4 Q9UMS4 252 261 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.0033913 112.71 By MS/MS By matching 6 0 2 1 1 4068100 4044200 23881 13156 2834 13984 33289;33290 23475 23475 1 31537 73241 SSESELSK LKHEKFTIQLQLSQKSSESELSKSASAKSI QLQLSQKSSESELSKSASAKSIDSKVADAA K S S S K S 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 4 0 0 0 0 0 0 8 0 865.40289 Q5SW79 Q5SW79 125 132 CEP170 Centrosomal protein of 170 kDa yes yes 2 0.0075842 127.46 By MS/MS 2 0 1 1 454760 454760 0 13157 1621 13985 33291 23476 23476 1 22604 0 SSFFSDR DAYSSFGSRSDSRGKSSFFSDRGSGSRGRF SRSDSRGKSSFFSDRGSGSRGRFDDRGRSD K S S D R G 0 1 0 1 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 7 0 844.37153 O00571 O00571 82 88 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 0.036001 110.81 By MS/MS By matching 5 0 2 1 1 6579300 6522900 56474 13158 105 13986 33292;33293 23477 23477 1 268120 167110 SSFTVDCSK VAKGLGLSKAYVGQKSSFTVDCSKAGNNML AYVGQKSSFTVDCSKAGNNMLLVGVHGPRT K S S S K A 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 3 1 0 0 1 0 0 9 0 1029.4437 P21333 P21333 2576 2584 FLNA Filamin-A yes yes 2 0.011449 101.65 By MS/MS 2 0.816 1 1 1 3 1072700 1072700 0 13159 648 13987 33294;33295;33296 23478 23478 1 48178 0 SSFVFVR YLLKMVAKQWYDFDRSSFVFVRKLREGQNF KQWYDFDRSSFVFVRKLREGQNFIFRHQHD R S S V R K 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 2 0 0 7 0 840.44939 Q9ULT8 Q9ULT8 1049 1055 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.04569 104.11 By MS/MS 2 0.816 1 1 1 3 567460 567460 0 13160 2826 13988 33297;33298;33299 23479 23479 1 23870 0 SSFYVNGLTLGGQK NITPAEVGVLVGKDRSSFYVNGLTLGGQKC RSSFYVNGLTLGGQKCSVIRDSLLQDGEFS R S S Q K C 0 0 1 0 0 1 0 3 0 0 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1469.7514 P07737 P07737 57 70 PFN1 Profilin-1 yes yes 2 3.3358E-12 238.01 By MS/MS 10 0 1 1 1216700 1216700 0 13161 491 13989 33300 23480;23481 23480 2 1293200 0 SSGAPAPGSGATIFALSSGQGR AAQAARGPRRLCTRRSSGAPAPGSGATIFA GSGATIFALSSGQGRCGIAVIRTSGPASGH R S S G R C 4 1 0 0 0 1 0 5 0 1 1 0 0 1 2 5 1 0 0 0 0 0 22 0 1974.9759 Q969Y2 Q969Y2 24 45 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 1.7149E-32 215.37 By MS/MS 7 0.816 1 1 1 3 5508500 5508500 0 13162 2111 13990 33301;33302;33303 23482;23483;23484 23483 3 80103 0 SSGAPETLQR IGGLKLLSNSSSLWRSSGAPETLQRVSGIS SSLWRSSGAPETLQRVSGISFPTTELLRVW R S S Q R V 1 1 0 0 0 1 1 1 0 0 1 0 0 0 1 2 1 0 0 0 0 0 10 0 1044.52 Q9BW92 Q9BW92 266 275 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.047784 79.489 By MS/MS By matching 5.75 0.829 2 1 1 3 1 11120000 11048000 72184 13163 2391 13991 33304;33305;33306;33307 23485;23486 23486 2 355250 213590 SSGASSIFDLR NDSRRGSGSPEDTPRSSGASSIFDLRNLAA DTPRSSGASSIFDLRNLAADSLLPSLLERA R S S L R N 1 1 0 1 0 0 0 1 0 1 1 0 0 1 0 4 0 0 0 0 0 0 11 0 1138.5619 Q96HP0 Q96HP0 185 195 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0048335 108.43 By MS/MS 2.5 0.5 1 1 2 309460 309460 0 13164 2193 13992 33308;33309 23487 23487 1 12249 0 SSGDYSATFLPGLIPAEK LHRPIILLDSLSGMRSSGDYSATFLPGLIP DYSATFLPGLIPAEKCTGKDGHLNKPICIA R S S E K C 2 0 0 1 0 0 1 2 0 1 2 1 0 1 2 3 1 0 1 0 0 0 18 0 1851.9254 Q96JH7 Q96JH7 314 331 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 3.3435E-07 151.7 By MS/MS 3.5 0.5 1 1 2 823200 823200 0 13165 2209 13993 33310;33311 23488 23488 1 21714 0 SSGGFVWACK YEHRLIDDMVAQVLKSSGGFVWACKNYDGD AQVLKSSGGFVWACKNYDGDVQSDILAQGF K S S C K N 1 0 0 0 1 0 0 2 0 0 0 1 0 1 0 2 0 1 0 1 0 0 10 0 1097.4964 P48735 P48735 300 309 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 0.00012358 162.97 By MS/MS 7 0 1 1 1143200 1143200 0 13166 912 13994 33312 23489 23489 1 20429 0 SSGGSEHSTEGSVSLGDGQLNR MGRPFQKNRVKPQFRSSGGSEHSTEGSVSL STEGSVSLGDGQLNRYSSRNFPAERHNPTV R S S N R Y 0 1 1 1 0 1 2 5 1 0 2 0 0 0 0 6 1 0 0 1 0 0 22 0 2159.9679 Q71RC2 Q71RC2 381 402 LARP4 La-related protein 4 yes yes 3 0.00026982 87.554 By MS/MS 4.5 0.5 1 1 2 1212000 1212000 0 13167 1752 13995 33313;33314 23490 23490 1 36799 0 SSGLPNIPVQTISR PGFPSFNHTQFPPSRSSGLPNIPVQTISRA RSSGLPNIPVQTISRAAAEKLFGNMEGDCP R S S S R A 0 1 1 0 0 1 0 1 0 2 1 0 0 0 2 3 1 0 0 1 0 0 14 0 1467.8045 P02786 P02786 326 339 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 0.00011781 145.81 By MS/MS By matching 5.6 2.8 1 1 2 1 1 1 1 1 1 9 1 23755000 23734000 21446 13168 437 13996 33315;33316;33317;33318;33319;33320;33321;33322;33323;33324 23491;23492 23492 2 754330 44814 SSGLTAVWVAR KDADSQNPDAPEGKRSSGLTAVWVARNRFA EGKRSSGLTAVWVARNRFAVLDRMHSLLIK R S S A R N 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 1 1 0 2 0 0 11 0 1145.6193 P53621 P53621 413 423 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 7.3474E-07 182.65 By MS/MS 2.5 1.12 1 1 1 1 4 4341500 4341500 0 13169 1005 13997 33325;33326;33327;33328 23493;23494 23494 2 132570 0 SSGNSSSSGSGSGSTSAGSSSPGAR ______________________________ GSGSTSAGSSSPGARRETKHGGHKNGRKGG K S S A R R 2 1 1 0 0 0 0 6 0 0 0 0 0 0 1 13 1 0 0 0 0 0 25 0 2101.8744 Q12797 Q12797 9 33 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 7.9013E-40 215.64 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 1833400 1833400 0 13170 1307 13998 33329;33330;33331;33332;33333;33334;33335;33336 23495;23496 23495 2 115620 0 SSGPGGQNVNK DSDIPLDRLTISYCRSSGPGGQNVNKVNSK SYCRSSGPGGQNVNKVNSKAEVRFHLATAE R S S N K V 0 0 2 0 0 1 0 3 0 0 0 1 0 0 1 2 0 0 0 1 0 0 11 0 1043.4996 Q14197 Q14197 84 94 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes yes 2 0.00095683 134.23 By MS/MS By matching 9 0 2 1 1 348830 342100 6724.2 13171 1419 13999 33337;33338 23497 23497 1 196340 72467 SSGPPSYFIK KTSEVVRLPYPLQMKSSGPPSYFIKRESWG PLQMKSSGPPSYFIKRESWGWTDFLMNPMV K S S I K R 0 0 0 0 0 0 0 1 0 1 0 1 0 1 2 3 0 0 1 0 0 0 10 0 1081.5444 Q9NPA0 Q9NPA0 142 151 EMC7 ER membrane protein complex subunit 7 yes yes 2 0.018221 93.598 By MS/MS 9 0 1 1 720330 720330 0 13172 2579 14000 33339 23498 23498 1 413400 0 SSGPTSLFAVTVAPPGAR QPQQQRGAAKEAAGKSSGPTSLFAVTVAPP PTSLFAVTVAPPGARQGQQQAGGKKKAEGG K S S A R Q 3 1 0 0 0 0 0 2 0 0 1 0 0 1 3 3 2 0 0 2 0 0 18 0 1713.905 Q00839 Q00839 187 204 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.004501 99.732 By MS/MS 4 0.816 1 1 1 3 1141100 1141100 0 13173 1238 14001 33340;33341;33342 23499 23499 1 32234 0 SSGQSAQLLSHEPGDPPCLR VHVALVLFELKLLLKSSGQSAQLLSHEPGD AQLLSHEPGDPPCLRRLNFVRLLMLYTRKF K S S L R R 1 1 0 1 1 2 1 2 1 0 3 0 0 0 3 4 0 0 0 0 0 0 20 0 2135.0066 Q8N1F7 Q8N1F7 505 524 NUP93 Nuclear pore complex protein Nup93 yes yes 3 0.0035547 78.554 By MS/MS 4.5 0.5 1 1 2 952790 952790 0 13174 1898 14002 33343;33344 23500 23500 1 35305 0 SSGSSYPSLLQCLK AAGTECLISGWGNTKSSGSSYPSLLQCLKA KSSGSSYPSLLQCLKAPVLSDSSCKSSYPG K S S L K A 0 0 0 0 1 1 0 1 0 0 3 1 0 0 1 5 0 0 1 0 0 0 14 0 1525.7446 CON__P00761 CON__P00761 134 147 yes yes 2 6.4375E-08 182.92 By MS/MS By MS/MS 5.69 3.04 2 1 2 1 2 1 1 2 2 2 9 7 17533000 12297000 5236000 + 13175 33 14003 33345;33346;33347;33348;33349;33350;33351;33352;33353;33354;33355;33356;33357;33358;33359;33360 23501;23502;23503;23504;23505;23506;23507;23508;23509;23510;23511;23512;23513;23514;23515;23516;23517;23518;23519;23520;23521;23522 23515 22 1502500 40585000 SSGSVASLPQSDR SLEPSYQKSLQTYLKSSGSVASLPQSDRSS LKSSGSVASLPQSDRSSSSSQESLNRPFSS K S S D R S 1 1 0 1 0 1 0 1 0 0 1 0 0 0 1 5 0 0 0 1 0 0 13 0 1289.6212 O75122 O75122 310 322 CLASP2 CLIP-associating protein 2 yes yes 2 0.00026495 145.28 By MS/MS 3 0 1 1 987660 987660 0 13176 279 14004 33361 23523 23523 1 25783 0 SSGTASSVAFTPLQGLEIVNPQAAEK KQSVVYGGKSTIRDRSSGTASSVAFTPLQG PLQGLEIVNPQAAEKKVAEANQKYFSSMAE R S S E K K 4 0 1 0 0 2 2 2 0 1 2 1 0 1 2 4 2 0 0 2 0 0 26 0 2601.3286 Q8WWY3 Q8WWY3 445 470 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 1.2778E-05 95.873 By MS/MS 6 0 1 1 696210 696210 0 13177 2043 14005 33362 23524 23524 1 5429 0 SSGVPVDGFYTEEVR VGKTTLIHKASEVLKSSGVPVDGFYTEEVR SSGVPVDGFYTEEVRQGGRRIGFDVVTLSG K S S V R Q 0 1 0 1 0 0 2 2 0 0 0 0 0 1 1 2 1 0 1 3 0 0 15 0 1640.7682 Q9BSD7 Q9BSD7 28 42 NTPCR Cancer-related nucleoside-triphosphatase yes yes 2 5.9878E-06 152.4 By MS/MS 9 0 1 1 2055600 2055600 0 13178 2335 14006 33363 23525 23525 1 1179700 0 SSHAVELACR APRTIFQRVLDILKKSSHAVELACRDPSQV DILKKSSHAVELACRDPSQVENLASSLQLI K S S C R D 2 1 0 0 1 0 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1128.5346 Q9UBB4 Q9UBB4 57 66 ATXN10 Ataxin-10 yes yes 2;3 0.0047001 108.43 By MS/MS 7 0 2 2 878110 878110 0 13179 2744 14007 33364;33365 23526;23527 23526 2 15692 0 SSHYDELLAAEAR GLATVIRYRQDDDQRSSHYDELLAAEARAI QRSSHYDELLAAEARAIKNGKGLHSKKEVP R S S A R A 3 1 0 1 0 0 2 0 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1460.6896 Q7KZF4 Q7KZF4 473 485 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 2.8728E-05 166.29 By MS/MS 4 0 1 1 579300 579300 0 13180 1757 14008 33366 23528 23528 1 15814 0 SSIDSEPALVLGPLK TITTDKMMDVTVTIKSSIDSEPALVLGPLK SSIDSEPALVLGPLKSVQELRREQQLAEIE K S S L K S 1 0 0 1 0 0 1 1 0 1 3 1 0 0 2 3 0 0 0 1 0 0 15 0 1524.8399 Q15155;P69849;Q5JPE7 Q15155 686 700 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 6.2168E-06 195.51 By MS/MS 2 1 1 1 2 698110 698110 0 13181 1190 14009 33367;33368 23529;23530 23530 2 21751 0 SSIGTGYDLSASTFSPDGR ______________________________ TGYDLSASTFSPDGRVFQVEYAMKAVENSS M S S G R V 1 1 0 2 0 0 0 3 0 1 1 0 0 1 1 5 2 0 1 0 0 0 19 0 1916.8752 P25788 P25788 2 20 PSMA3 Proteasome subunit alpha type-3 yes yes 2 0.00051336 107.93 By MS/MS 8 0 1 1 1504400 1504400 0 13182 690 14010 33369 23531 23531 1 99245 0 SSISALNSSQLEPVVR GDMRIMENNLENELKSSISALNSSQLEPVV SISALNSSQLEPVVRFLHLLLDKLILLVIR K S S V R F 1 1 1 0 0 1 1 0 0 1 2 0 0 0 1 5 0 0 0 2 0 0 16 0 1685.8948 Q96N67 Q96N67 772 787 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 2.6444E-07 193 By MS/MS 3 0.816 1 1 1 3 1329100 1329100 0 13183 2230 14011 33370;33371;33372 23532 23532 1 51390 0 SSITEPEGPNGPNIQK LRKKLSNAPRPLKKRSSITEPEGPNGPNIQ SITEPEGPNGPNIQKLLYQRTTIAAMETIS R S S Q K L 0 0 2 0 0 1 2 2 0 2 0 1 0 0 3 2 1 0 0 0 0 0 16 0 1666.8162 Q13625 Q13625 736 751 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 5.1288E-10 178.1 By MS/MS 3 0 1 1 1055500 1055500 0 13184 1391 14012 33373 23533 23533 1 27555 0 SSKQHYNCEHSK LYGPSSVSFADDFVRSSKQHYNCEHSKINF FVRSSKQHYNCEHSKINFRDKRSALQSINE R S S S K I 0 0 1 0 1 1 1 0 2 0 0 2 0 0 0 3 0 0 1 0 0 0 12 1 1503.6525 P50454 P50454 149 160 SERPINH1 Serpin H1 yes yes 3 0.00047452 132.86 By MS/MS 6.5 0.5 1 1 2 547140 547140 0 13185 947 14013 33374;33375 23534 23534 1 6845.7 0 SSLAEFISER LVLVVAVTVRAALFRSSLAEFISERVEVVS AALFRSSLAEFISERVEVVSPLSSWKRVVE R S S E R V 1 1 0 0 0 0 2 0 0 1 1 0 0 1 0 3 0 0 0 0 0 0 10 0 1137.5666 Q9H490 Q9H490 22 31 PIGU Phosphatidylinositol glycan anchor biosynthesis class U protein yes yes 2 0.00065696 137.95 By MS/MS 1 0 1 1 75081 75081 0 13186 2495 14014 33376 23535;23536 23535 2 3668.3 0 SSLEEGISVLK GCVSQQRYERACWMKSSLEEGISVLKSIEF CWMKSSLEEGISVLKSIEFLSSKWKKLIPE K S S L K S 0 0 0 0 0 0 2 1 0 1 2 1 0 0 0 3 0 0 0 1 0 0 11 0 1160.6289 Q9Y2Z2 Q9Y2Z2 534 544 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 6.7651E-07 183.67 By MS/MS 5 0 1 1 2334000 2334000 0 13187 2908 14015 33377 23537 23537 1 95938 0 SSLEGPTILDIEK ESLIADKSGSKKTLRSSLEGPTILDIEKFH LRSSLEGPTILDIEKFHRESFFYTHLINFS R S S E K F 0 0 0 1 0 0 2 1 0 2 2 1 0 0 1 2 1 0 0 0 0 0 13 0 1400.7399 Q7L576 Q7L576 582 594 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 0.0001967 149.33 By MS/MS 3 0 1 1 547570 547570 0 13188 1765 14016 33378 23538 23538 1 14294 0 SSLFELAK VAVILTVPVLFFTVRSSLFELAKKTKFNLC VLFFTVRSSLFELAKKTKFNLCRHTVVTCI R S S A K K 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 8 0 893.48583 Q9H2H9 Q9H2H9 377 384 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes yes 2 0.022264 103.83 By MS/MS 1 0 1 1 390620 390620 0 13189 2478 14017 33379 23539 23539 1 19085 0 SSLGPVGLDK SQNVMAAASIANIVKSSLGPVGLDKMLVDD ANIVKSSLGPVGLDKMLVDDIGDVTITNDG K S S D K M 0 0 0 1 0 0 0 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 10 0 971.52876 P17987 P17987 34 43 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.0028742 114.4 By MS/MS By matching 6 2.83 1 1 1 2 1 1 1 1 8 1 101630000 101570000 60145 13190 619 14018 33380;33381;33382;33383;33384;33385;33386;33387;33388 23540;23541;23542;23543;23544;23545;23546 23540 7 2147100 184460 SSLGSLQTPEAVTTR ARRKTVFSPTLPAARSSLGSLQTPEAVTTR SSLGSLQTPEAVTTRKGTGLLSSDYRIING R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 Q7Z2W4 Q7Z2W4 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.00010955 136.24 By MS/MS By matching 5.2 1.17 2 1 1 1 4 1 7509500 7473800 35712 13191 1777 14019 33389;33390;33391;33392;33393 23547;23548 23547 2 202160 74622 SSLIILK QEVYHKSMTLKEAIKSSLIILKQVMEEKLN MTLKEAIKSSLIILKQVMEEKLNATNIELA K S S L K Q 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 7 0 772.50584 P28066 P28066 197 203 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.012094 148.21 By MS/MS 8 0 1 1 2529200 2529200 0 13192 712 14020 33394 23549 23549 1 166850 0 SSLLLGFR FLKSNTLPISLQSIRSSLLLGFRRSMNINL ISLQSIRSSLLLGFRRSMNINLWSEITELL R S S F R R 0 1 0 0 0 0 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 8 0 891.5178 P42704 P42704 542 549 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0028217 151.29 By MS/MS 4.5 1.12 1 1 1 1 4 25962000 25962000 0 13193 854 14021 33395;33396;33397;33398 23550;23551;23552 23552 3 678530 0 SSLNPILFR ADTENLLKAPTIVGKSSLNPILFRGVGMVA PTIVGKSSLNPILFRGVGMVADPDNPLVLD K S S F R G 0 1 1 0 0 0 0 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 9 0 1045.592 P39656 P39656 190 198 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.00063366 154.49 By MS/MS 5.17 2.27 1 1 1 1 1 1 6 48806000 48806000 0 13194 825 14022 33399;33400;33401;33402;33403;33404 23553;23554;23555;23556;23557 23556 5 525610 0 SSLQSQCLNEVLK DLCSRVTFVNFTVTRSSLQSQCLNEVLKAE TRSSLQSQCLNEVLKAERPDVDEKRSDLLK R S S L K A 0 0 1 0 1 2 1 0 0 0 3 1 0 0 0 3 0 0 0 1 0 0 13 0 1504.7555 Q14204 Q14204 3706 3718 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.3836E-34 254.07 By MS/MS 2.5 1.12 1 1 1 1 4 3117200 3117200 0 13195 1421 14023 33405;33406;33407;33408 23558;23559;23560;23561 23558 4 137320 0 SSLSEYAFR ______________________________ ______________________________ M S S F R M 1 1 0 0 0 0 1 0 0 0 1 0 0 1 0 3 0 0 1 0 0 0 9 0 1058.5033 Q9Y291 Q9Y291 2 10 MRPS33 28S ribosomal protein S33, mitochondrial yes yes 2 0.00010968 158.07 By MS/MS 10 0 1 1 2379500 2379500 0 13196 2879 14024 33409 23562 23562 1 2529100 0 SSLVNLLSR SGVHVVVTGPPNAGKSSLVNLLSRKPVSIV PPNAGKSSLVNLLSRKPVSIVSPEPGTTRD K S S S R K 0 1 1 0 0 0 0 0 0 0 3 0 0 0 0 3 0 0 0 1 0 0 9 0 987.57129 Q969Y2 Q969Y2 263 271 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes yes 2 0.0008397 145.72 By MS/MS 7 0.816 1 1 1 3 3599400 3599400 0 13197 2111 14025 33410;33411;33412 23563;23564;23565 23563 3 73570 0 SSLYCSDIGK VNNQLGYTTPAERGRSSLYCSDIGKLVGCA AERGRSSLYCSDIGKLVGCAIIHVNGDSPE R S S G K L 0 0 0 1 1 0 0 1 0 1 1 1 0 0 0 3 0 0 1 0 0 0 10 0 1128.5121 Q96HY7 Q96HY7 379 388 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes yes 2 0.0010404 120.99 By MS/MS 4 0 1 1 746550 746550 0 13198 2198 14026 33413 23566 23566 1 20380 0 SSMNPEYDYLFK ______________________________ ______________________________ M S S F K L 0 0 1 1 0 0 1 0 0 0 1 1 1 1 1 2 0 0 2 0 0 0 12 0 1492.6544 P62820 P62820 2 13 RAB1A Ras-related protein Rab-1A yes yes 2 0.0040545 92.611 By MS/MS 9 0 1 1 80390 80390 0 13199 1145 14027 33414 23567 23567 895 1 46137 0 SSMNVDEAFSSLAR LAREHGIRFFETSAKSSMNVDEAFSSLARD KSSMNVDEAFSSLARDILLKSGGRRSGNGN K S S A R D 2 1 1 1 0 0 1 0 0 0 1 0 1 1 0 4 0 0 0 1 0 0 14 0 1512.6879 P51153 P51153 154 167 RAB13 Ras-related protein Rab-13 yes yes 2 1.2369E-35 265.75 By MS/MS 4 3.56 1 1 1 3 1377500 1377500 0 13200 962 14028 33415;33416;33417 23568;23569 23569 728 2 647080 0 SSMSVTSLEAELQAK LVFATPLCCALFPQKSSMSVTSLEAELQAK SSMSVTSLEAELQAKIQESHPELRRVYFNK K S S A K I 2 0 0 0 0 1 2 0 0 0 2 1 1 0 0 4 1 0 0 1 0 0 15 0 1579.7763 Q9H9B4 Q9H9B4 291 305 SFXN1 Sideroflexin-1 yes yes 2;3 8.8639E-50 272.1 By MS/MS 8.4 0.49 3 2 5 17437000 17437000 0 13201 2533 14029;14030 33418;33419;33420;33421;33422 23570;23571;23572;23573;23574 23570 1530 5 1179500 0 SSNECFKCGR ______________________________ ______________________________ M S S G R S 0 1 1 0 2 0 1 1 0 0 0 1 0 1 0 2 0 0 0 0 0 0 10 1 1243.5074 P62633 P62633 2 11 CNBP Cellular nucleic acid-binding protein yes yes 2 9.1887E-07 191.45 By MS/MS 9.5 0.5 1 1 2 1558400 1558400 0 13202 1138 14031 33423;33424 23575;23576 23575 2 1079500 0 SSNVLLDER FLHQDSPSLIHGDIKSSNVLLDERLTPKLG IHGDIKSSNVLLDERLTPKLGDFGLARFSR K S S E R L 0 1 1 1 0 0 1 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 9 0 1031.5247 P51617 P51617 343 351 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 2 0.014268 99.973 By MS/MS 5 0 1 1 720780 720780 0 13203 971 14032 33425 23577 23577 1 29627 0 SSPASTPSR ______________________________ ______________________________ M S S S R R 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 9 0 888.43011 P33991 P33991 2 10 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.053763 62.582 By MS/MS 4 0 1 1 543330 543330 0 13204 773 14033 33426 23578 23578 1 14832 0 SSPEPVALTESETEYVIR LAAVPEFRGLGPLFKSSPEPVALTESETEY EPVALTESETEYVIRCTKHTFTNHMVFQFD K S S I R C 1 1 0 0 0 0 4 0 0 1 1 0 0 0 2 3 2 0 1 2 0 0 18 0 2005.9844 Q9Y678 Q9Y678 632 649 COPG1 Coatomer subunit gamma-1 yes yes 2;3 2.3119E-14 190.85 By MS/MS 5.2 1.17 2 1 1 1 5 10104000 10104000 0 13205 2996 14034 33427;33428;33429;33430;33431 23579;23580;23581 23581 3 273550 0 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR NQDKKNGAAKQSNPKSSPGQPEAGPEGAQE PAVEAEGPGSSQAPRKPEGAQARTAQSGAL K S S P R K 7 2 0 0 0 4 5 5 0 0 0 0 0 0 7 5 0 0 0 1 0 0 36 1 3483.6251 P40222 P40222 18 53 TXLNA Alpha-taxilin yes yes 3 0.014344 42.024 By MS/MS 5 0 1 1 2236400 2236400 0 13206 827 14035 33432 23582 23582 1 91925 0 SSPLVNAALEGK LQQRYTLPNGDTAWRSSPLVNAALEGKLVL AWRSSPLVNAALEGKLVLLDGIHRVNAGTL R S S G K L 2 0 1 0 0 0 1 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1184.6401 A3KMH1 A3KMH1 498 509 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0036329 112.94 By MS/MS By matching 2.8 0.748 2 2 1 3 2 2490800 2362700 128100 13207 13 14036 33433;33434;33435;33436;33437 23583;23584 23583 2 87314 171290 SSPPSIAPLALDSADLSEEK VLHTYQDHLWRSGNKSSPPSIAPLALDSAD IAPLALDSADLSEEKGSVQMDSTLQGDMRH K S S E K G 3 0 0 2 0 0 2 0 0 1 3 1 0 0 3 5 0 0 0 0 0 0 20 0 2026.0106 P41214 P41214 183 202 EIF2D Eukaryotic translation initiation factor 2D yes yes 2 0.014014 74.649 By MS/MS 5 0 1 1 551340 551340 0 13208 837 14037 33438 23585 23585 1 22662 0 SSPPVAFTEVLQAPAIR VPMTGNPAEEGDVPRSSPPVAFTEVLQAPA PPVAFTEVLQAPAIRIPPSSPLCGLGGSPR R S S I R I 3 1 0 0 0 1 1 0 0 1 1 0 0 1 3 2 1 0 0 2 0 0 17 0 1781.9676 Q6ZSY5 Q6ZSY5 400 416 PPP1R3F Protein phosphatase 1 regulatory subunit 3F yes yes 2 0.0039605 108.68 By MS/MS 4 0 1 1 124220 124220 0 13209 1746 14038 33439 23586 23586 1 3391 0 SSPSGPSNPSNPSVEEK VAVYFMTGPMGFYWRSSPSGPSNPSNPSVE PSGPSNPSNPSVEEKLEHLEKQVRLLNIRL R S S E K L 0 0 2 0 0 0 2 1 0 0 0 1 0 0 4 6 0 0 0 1 0 0 17 0 1698.7697 Q8WY22 Q8WY22 207 223 BRI3BP BRI3-binding protein yes yes 2 6.9902E-25 218.45 By MS/MS By matching 9 0 2 1 1 1089800 1057000 32807 13210 2049 14039 33440;33441 23587 23587 1 606620 353570 SSPTDKHTLVK ERIDKIWPKLRVLARSSPTDKHTLVKGIID VLARSSPTDKHTLVKGIIDSTVSDQRQVVA R S S V K G 0 0 0 1 0 0 0 0 1 0 1 2 0 0 1 2 2 0 0 1 0 0 11 1 1211.651 P20020;P23634;Q16720;Q01814 P20020 768 778 ATP2B1;ATP2B4;ATP2B3;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 4;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 2 yes no 3 0.036449 68.786 By MS/MS 2.5 1.12 1 1 1 1 4 768950 768950 0 13211 637 14040 33442;33443;33444;33445 23588 23588 1 29100 0 SSPVEFECINEK GTFQTTMTKLKEASRSSPVEFECINEKKRQ ASRSSPVEFECINEKKRQKKKSYKNSGVIS R S S E K K 0 0 1 0 1 0 3 0 0 1 0 1 0 1 1 2 0 0 0 1 0 0 12 0 1437.6446 O75131 O75131 242 253 CPNE3 Copine-3 yes yes 2 2.8517E-24 247.22 By MS/MS By matching 6.75 0.829 2 1 1 3 1 13084000 13045000 39046 13212 282 14041 33446;33447;33448;33449 23589;23590 23590 2 140030 119750 SSPVVNDGVVR NNEDVDALMKSLQVKSSPVVNDGVVRLRGL LQVKSSPVVNDGVVRLRGLPYSCNEKDIVD K S S V R L 0 1 1 1 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 4 0 0 11 0 1127.5935 Q12849 Q12849 243 253 GRSF1 G-rich sequence factor 1 yes yes 2 0.0011915 131.09 By MS/MS By matching 6 0 2 1 1 11586000 11495000 90698 13213 1310 14042 33450;33451 23591 23591 1 89638 278160 SSQPTQPEPR DLTCLIDTNFSAQPRSSQPTQPEPRHRAVC SAQPRSSQPTQPEPRHRAVCGRSRDSPGYD R S S P R H 0 1 0 0 0 2 1 0 0 0 0 0 0 0 3 2 1 0 0 0 0 0 10 0 1125.5415 Q12770 Q12770 887 896 SCAP Sterol regulatory element-binding protein cleavage-activating protein yes yes 2 0.0088528 104.2 By MS/MS 1 0 1 1 0 0 0 13214 1305 14043 33452 23592 23592 1 0 0 SSQQEFQEVFNR LDGVGLKTIERRGSKSSQQEFQEVFNRSVM GSKSSQQEFQEVFNRSVMIIAATNRPDVLD K S S N R S 0 1 1 0 0 3 2 0 0 0 0 0 0 2 0 2 0 0 0 1 0 0 12 0 1497.6848 Q9BVQ7 Q9BVQ7 609 620 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 2 1.5354E-35 252.14 By MS/MS 5 0 1 1 0 0 0 13215 2382 14044 33453 23593 23593 1 0 0 SSQSSSQQFSGIGR GAGTYGASSTTSTGRSSQSSSQQFSGIGRS RSSQSSSQQFSGIGRSGQQPQPLMSQQFAQ R S S G R S 0 1 0 0 0 3 0 2 0 1 0 0 0 1 0 6 0 0 0 0 0 0 14 0 1454.675 Q92841 Q92841 671 684 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 6.2424E-12 197.36 By MS/MS By MS/MS 5 0 2 1 1 2486100 2453600 32548 13216 2082 14045 33454;33455 23594;23595 23595 2 100850 96309 SSQTSGTNEQSSAIVSAR QSQLTEKDSMIENMKSSQTSGTNEQSSAIV TSGTNEQSSAIVSARDSEQVAELKQELATL K S S A R D 2 1 1 0 0 2 1 1 0 1 0 0 0 0 0 6 2 0 0 1 0 0 18 0 1808.85 O60763 O60763 765 782 USO1 General vesicular transport factor p115 yes yes 2 9.7946E-56 284.74 By MS/MS 4 0 1 1 1373400 1373400 0 13217 264 14046 33456 23596 23596 1 37493 0 SSSDNNTNTLGR NIARTNATNNMNLSRSSSDNNTNTLGRNVM LSRSSSDNNTNTLGRNVMSTATSPLMGAQS R S S G R N 0 1 3 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 0 0 0 12 0 1264.5644 Q9ULT8 Q9ULT8 1569 1580 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 2.1563E-05 172.21 By MS/MS 2 0.816 1 1 1 3 1021000 1021000 0 13218 2826 14047 33457;33458;33459 23597 23597 1 46718 0 SSSEQGPGPAAALGR EVAGRRRAWAWGWRRSSSEQGPGPAAALGR SSSEQGPGPAAALGRVEAAHYQLVYTCKVC R S S G R V 3 1 0 0 0 1 1 3 0 0 1 0 0 0 2 3 0 0 0 0 0 0 15 0 1383.6743 Q5SXM8 Q5SXM8 49 63 DNLZ DNL-type zinc finger protein yes yes 2 0.0042436 107.17 By MS/MS 10 0 1 1 276410 276410 0 13219 1623 14048 33460 23598 23598 1 293800 0 SSSGLNSEKVAALIQK ______________________________ SSGLNSEKVAALIQKLNSDPQFVLAQNVGT M S S Q K L 2 0 1 0 0 1 1 1 0 1 2 2 0 0 0 4 0 0 0 1 0 0 16 1 1630.889 Q13867 Q13867 2 17 BLMH Bleomycin hydrolase yes yes 2 0.044678 102.62 By MS/MS 8 0 1 1 80759 0 80759 13220 1398 14049 33461 23599 23599 1 0 688970 SSSPAPADIAQTVQEDLR PEPVLEETAPEDAQKSSSPAPADIAQTVQE PAPADIAQTVQEDLRTFSWASVTSKNLPPS K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 6.7458E-14 181.75 By MS/MS 5 0 1 1 558040 558040 0 13221 1352 14050 33462 23600 23600 1 22938 0 SSSQIPAQPSVAK NNENKKETDEVSNTKSSSQIPAQPSVAKVP TKSSSQIPAQPSVAKVPYGKGPSFNQERGT K S S A K V 2 0 0 0 0 2 0 0 0 1 0 1 0 0 2 4 0 0 0 1 0 0 13 0 1298.683 Q9Y520 Q9Y520 375 387 PRRC2C Protein PRRC2C yes yes 2 0.0046797 105.17 By MS/MS 1.5 0.5 1 1 2 1337600 1337600 0 13222 2963 14051 33463;33464 23601 23601 1 65782 0 SSSRGPYESGSGHSSGLGHQESR RQSSSYGPHGYGSGRSSSRGPYESGSGHSS SGSGHSSGLGHQESRSGQSSGYGQHGSSSG R S S S R S 0 2 0 0 0 1 2 5 2 0 1 0 0 0 1 8 0 0 1 0 0 0 23 1 2345.0381 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 568 590 HRNR Hornerin yes no 4 0.026527 46.578 By matching By MS/MS 3.17 1.46 1 1 2 2 2 4 519940 170240 349700 + 13223 64 14052 33465;33466;33467;33468;33469;33470 23602;23603 23603 2 6323.2 599890 SSSSGSVGESSSK SGGGYGGGSSSGGHKSSSSGSVGESSSKGP HKSSSSGSVGESSSKGPRY___________ K S S S K G 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 8 0 0 0 1 0 0 13 0 1184.5157 CON__P13645;P13645 CON__P13645 577 589 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.015357 103.31 By MS/MS 3 0 1 1 91379 0 91379 + 13224 49 14053 33471 23604 23604 1 0 130960 SSSSGSVGESSSKGPR SGGGYGGGSSSGGHKSSSSGSVGESSSKGP SSSGSVGESSSKGPRY______________ K S S P R Y 0 1 0 0 0 0 1 3 0 0 0 1 0 0 1 8 0 0 0 1 0 0 16 1 1494.691 CON__P13645;P13645 CON__P13645 577 592 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.00035349 137.84 By MS/MS 5 0 1 1 214180 214180 0 + 13225 49 14054 33472 23605 23605 1 8803.6 0 SSSSQHPEQTGR NKQPSSEPEWTPEPRSSSSQHPEQTGRTRR EPRSSSSQHPEQTGRTRRSGPIKKPVLKAL R S S G R T 0 1 0 0 0 2 1 1 1 0 0 0 0 0 1 4 1 0 0 0 0 0 12 0 1299.5804 Q5JSZ5 Q5JSZ5 924 935 PRRC2B Protein PRRC2B yes yes 2 0.048005 92.611 By MS/MS 2 0 1 1 77432 77432 0 13226 1608 14055 33473 23606 23606 1 3848.8 0 SSSSSGVPYSPAIPNK QLDRSIKGLKEHFHKSSSSSGVPYSPAIPN SSSSGVPYSPAIPNKRKDTPTKKPVKRPGT K S S N K R 1 0 1 0 0 0 0 1 0 1 0 1 0 0 3 6 0 0 1 1 0 0 16 0 1576.7733 Q9UPT5 Q9UPT5 241 256 EXOC7 Exocyst complex component 7 yes yes 2 0.00043417 124.42 By MS/MS 5 0 1 1 928370 928370 0 13227 2853 14056 33474 23607 23607 1 38160 0 SSTETCYSAIPK SANETSSILVESVTRSSTETCYSAIPKASS VTRSSTETCYSAIPKASSDASKVTSKGAGL R S S P K A 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 3 2 0 1 0 0 0 12 0 1342.6075 O75369 O75369 2496 2507 FLNB Filamin-B yes yes 2 0.014015 92.538 By MS/MS 2 0 1 1 206480 206480 0 13228 300 14057 33475 23608 23608 1 10263 0 SSTNLSEFVMR INLEEVGTICLGFFKSSTNLSEFVMRKIGD GFFKSSTNLSEFVMRKIGDLACANIQHLSS K S S M R K 0 1 1 0 0 0 1 0 0 0 1 0 1 1 0 3 1 0 0 1 0 0 11 0 1269.6023 Q7L8L6 Q7L8L6 328 338 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 0.0074215 100.69 By MS/MS 5 0 1 1 1339000 1339000 0 13229 1770 14058 33476 23609 23609 1 55038 0 SSTPLPTISSSAENTR EKKLLKLREQGTESRSSTPLPTISSSAENT STPLPTISSSAENTRQNGSNDSDRYSDNEE R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 P42166;P42167 P42167 158 173 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0038819 112.42 By MS/MS By MS/MS 6 0.707 1 2 1 3 1 13827000 13666000 161460 13230 846;845 14059 33477;33478;33479;33480 23610;23611;23612;23613;23614 23611 5 178150 495170 SSTQMTWGALFR ESFLAFTTHPSQFLRSSTQMTWGALFRHEI FLRSSTQMTWGALFRHEILSRDPLLLAIIP R S S F R H 1 1 0 0 0 1 0 1 0 0 1 0 1 1 0 2 2 1 0 0 0 0 12 0 1383.6605 Q9HAV4 Q9HAV4 369 380 XPO5 Exportin-5 yes yes 2 3.7454E-05 164.97 By MS/MS 3.5 0.5 1 1 2 387810 387810 0 13231 2546 14060 33481;33482 23615 23615 1538 1 10233 0 SSTSEGLLLK RPLNLGPFVVRAFLRSSTSEGLLLKIDPLL RAFLRSSTSEGLLLKIDPLLPKEVKNEESE R S S L K I 0 0 0 0 0 0 1 1 0 0 3 1 0 0 0 3 1 0 0 0 0 0 10 0 1033.5655 Q9BYD6 Q9BYD6 297 306 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 0.00088136 128.36 By MS/MS By matching 8 0 2 1 1 1894000 1875300 18706 13232 2415 14061 33483;33484 23616 23616 1 123710 159590 SSTVTEAPIAVVTSR EEKVTLLNAPTKRPRSSTVTEAPIAVVTSR SSTVTEAPIAVVTSRTSEVYVWGGGKSTPQ R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.012747 88.803 By MS/MS 2 0.816 1 1 1 3 596850 596850 0 13233 1999 14062 33485;33486;33487 23617 23617 1 26228 0 SSVALAPALVETYSR IHSIATRVIKLAHAKSSVALAPALVETYSR SSVALAPALVETYSRLLVYMEIESLGIKGF K S S S R L 3 1 0 0 0 0 1 0 0 0 2 0 0 0 1 3 1 0 1 2 0 0 15 0 1562.8304 Q9ULK4 Q9ULK4 555 569 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 2 0.029882 76.165 By MS/MS 3 0 1 1 273960 273960 0 13234 2824 14063 33488 23618 23618 1 7151.6 0 SSVAVLTQESFAEHR ______________________________ SSVAVLTQESFAEHRSGLVPQQIKVATLNS M S S H R S 2 1 0 0 0 1 2 0 1 0 1 0 0 1 0 3 1 0 0 2 0 0 15 0 1659.8216 Q00341 Q00341 2 16 HDLBP Vigilin yes yes 2 1.8495E-21 229.56 By MS/MS By MS/MS 6 2.55 2 1 1 1 1 1 1 7 1 10449000 10384000 65022 13235 1231 14064 33489;33490;33491;33492;33493;33494;33495;33496 23619;23620;23621;23622;23623 23620 5 551370 93190 SSVLENFVGR DLPQIAVVGGQSAGKSSVLENFVGRDFLPR QSAGKSSVLENFVGRDFLPRGSGIVTRRPL K S S G R D 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 10 0 1106.572 P50570;Q05193;Q9UQ16 P50570 45 54 DNM2;DNM1;DNM3 Dynamin-2;Dynamin-1;Dynamin-3 no no 2 0.0001838 157.34 By MS/MS 4 0 1 1 650900 650900 0 13236 949;2857 14065 33497 23624 23624 1 17769 0 SSVLIAQQTDTSDPEK LAFPSPEKLLRLGPKSSVLIAQQTDTSDPE SVLIAQQTDTSDPEKVVSAFLKVSSVFKDE K S S E K V 1 0 0 2 0 2 1 0 0 1 1 1 0 0 1 3 2 0 0 1 0 0 16 0 1717.837 P46060 P46060 453 468 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 1.8205E-29 249.19 By MS/MS 5.5 0.5 1 1 2 2524600 2524600 0 13237 876 14066 33498;33499 23625 23625 1 83666 0 SSVLQVSVLQSTK KLVLYPSAQEKVLQRSSVLQVSVLQSTKDS QRSSVLQVSVLQSTKDSSKRICVANTHLYW R S S T K D 0 0 0 0 0 2 0 0 0 0 2 1 0 0 0 4 1 0 0 3 0 0 13 0 1374.7718 Q6L8Q7 Q6L8Q7 432 444 PDE12 2,5-phosphodiesterase 12 yes yes 2 6.5787E-13 213.63 By MS/MS 5 0 1 1 668740 668740 0 13238 1687 14067 33500 23626 23626 1 27488 0 SSVQEECVSTISSSKDEDPLAATR PSEELELDKWKTTMKSSVQEECVSTISSSK TISSSKDEDPLAATREFIEMWRLLGREVPE K S S T R E 2 1 0 2 1 1 3 0 0 1 1 1 0 0 1 6 2 0 0 2 0 0 24 1 2595.197 Q7L0Y3 Q7L0Y3 72 95 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 3 2.917E-06 102.19 By MS/MS 7 0 1 1 10421000 10421000 0 13239 1761 14068 33501 23627 23627 1 186230 0 SSVVTAVK PRLKGYLISGSSYARSSVVTAVKFTISDHP SGSSYARSSVVTAVKFTISDHPQPIDPLLK R S S V K F 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 1 0 0 3 0 0 8 0 789.45962 Q86VP6 Q86VP6 983 990 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.014016 114.5 By MS/MS 4 0.816 1 1 1 3 1673300 1673300 0 13240 1829 14069 33502;33503;33504 23628 23628 1 47161 0 SSYLEYQK EEEITPTIQKLKEERSSYLEYQKVMREIEH QKLKEERSSYLEYQKVMREIEHLSRLYIAY R S S Q K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 8 0 1016.4815 O95347 O95347 215 222 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.004786 137.9 By MS/MS 3 0 1 1 1725500 1725500 0 13241 385 14070 33505 23629 23629 1 45043 0 SSYSRFSSSGGGGGGGR GGGGGGGLGSGGSIRSSYSRFSSSGGGGGG YSRFSSSGGGGGGGRFSSSSGYGGGSSRVC R S S G R F 0 2 0 0 0 0 0 7 0 0 0 0 0 1 0 6 0 0 1 0 0 0 17 1 1561.6869 P35527 P35527 30 46 KRT9 Keratin, type I cytoskeletal 9 yes yes 3 0.005669 74.793 By MS/MS 2.5 1.12 1 1 1 1 4 348860 0 348860 + 13242 791 14071 33506;33507;33508;33509 23630;23631;23632 23630 3 0 497140 STAAFHISSLLEK ______________________________ ______________________________ M S T E K M 2 0 0 0 0 0 1 0 1 1 2 1 0 1 0 3 1 0 0 0 0 0 13 0 1402.7456 O75155 O75155 2 14 CAND2 Cullin-associated NEDD8-dissociated protein 2 yes yes 2 3.2189E-09 205.56 By MS/MS 3.5 0.5 1 1 2 659020 659020 0 13243 286 14072 33510;33511 23633;23634 23633 2 17495 0 STAALEEDAQILK KPERKPSDEEFASRKSTAALEEDAQILKVI RKSTAALEEDAQILKVIEAYCTSAKTRQTL K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 Q14155 Q14155 703 715 ARHGEF7 Rho guanine nucleotide exchange factor 7 no no 2 3.5537E-13 261.87 By MS/MS 5 0 1 1 1164000 1164000 0 13244 1410 14073 33512 23635 23635 1 47847 0 STAFQLVELGPGR LLGIWFISEWMATGKSTAFQLVELGPGRGT GKSTAFQLVELGPGRGTLVGDILRVFTQLG K S T G R G 1 1 0 0 0 1 1 2 0 0 2 0 0 1 1 1 1 0 0 1 0 0 13 0 1373.7303 Q7L592 Q7L592 115 127 NDUFAF7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 2 0.00030721 142.76 By MS/MS 7 0 1 1 2013700 2013700 0 13245 1766 14074 33513 23636 23636 1 35985 0 STAGDTHLGGEDFDNR DVSILTIEDGIFEVKSTAGDTHLGGEDFDN TAGDTHLGGEDFDNRMVNHFIAEFKRKHKK K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 P11142;P54652 P11142 221 236 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 1.7834E-14 196.7 By MS/MS By matching 5.88 1.05 4 2 1 1 6 2 35243000 35033000 210210 13246 546 14075 33514;33515;33516;33517;33518;33519;33520;33521 23637;23638;23639 23637 3 1001800 622010 STAQQELDGKPASPTPVIVASHTANKEEK ERNVMEEGKDFQPSRSTAQQELDGKPASPT TPVIVASHTANKEEKSLLELEVDLDNLELE R S T E K S 4 0 1 1 0 2 3 1 1 1 1 3 0 0 3 3 3 0 0 2 0 0 29 2 3032.5415 P35606 P35606 847 875 COPB2 Coatomer subunit beta yes yes 4 0.050696 32.164 By MS/MS 1 0 1 1 244270 244270 0 13247 795 14076 33522 23640 23640 1 11934 0 STCIYGGAPK VQQVAAEYCRACRLKSTCIYGGAPKGPQIR ACRLKSTCIYGGAPKGPQIRDLERGVEICI K S T P K G 1 0 0 0 1 0 0 2 0 1 0 1 0 0 1 1 1 0 1 0 0 0 10 0 1052.4961 Q92841;P17844 P17844 198 207 DDX17;DDX5 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 2 0.00077622 133.23 By MS/MS 5 0 1 1 968280 968280 0 13248 616;2082 14077 33523 23641 23641 1 39800 0 STDQTVLEELASIK LVHHGYCATAEAFARSTDQTVLEELASIKN RSTDQTVLEELASIKNRQRIQKLVLAGRMG R S T I K N 1 0 0 1 0 1 2 0 0 1 2 1 0 0 0 2 2 0 0 1 0 0 14 0 1532.7934 Q96S59 Q96S59 392 405 RANBP9 Ran-binding protein 9 yes yes 2 3.6041E-59 296.28 By MS/MS 5 0.816 1 1 1 3 2917900 2917900 0 13249 2254 14078 33524;33525;33526 23642;23643 23642 2 79022 0 STDQTVLEELASIKNR LVHHGYCATAEAFARSTDQTVLEELASIKN TDQTVLEELASIKNRQRIQKLVLAGRMGEA R S T N R Q 1 1 1 1 0 1 2 0 0 1 2 1 0 0 0 2 2 0 0 1 0 0 16 1 1802.9374 Q96S59 Q96S59 392 407 RANBP9 Ran-binding protein 9 yes yes 3 0.01136 77.633 By MS/MS 4.5 0.5 1 1 2 737480 737480 0 13250 2254 14079 33527;33528 23644 23644 1 21167 0 STDTGVSLPSYEEDQGSK ______________________________ TGVSLPSYEEDQGSKLIRKAKEAPFVPVGI M S T S K L 0 0 0 2 0 1 2 2 0 0 1 1 0 0 1 4 2 0 1 1 0 0 18 0 1898.8381 Q9Y241 Q9Y241 2 19 HIGD1A HIG1 domain family member 1A, mitochondrial yes yes 2 0.0005974 113.77 By MS/MS 10 0 1 1 29596000 29596000 0 13251 2866 14080 33529 23645;23646 23645 2 31457000 0 STDTGVSLPSYEEDQGSKLIR ______________________________ SLPSYEEDQGSKLIRKAKEAPFVPVGIAGF M S T I R K 0 1 0 2 0 1 2 2 0 1 2 1 0 0 1 4 2 0 1 1 0 0 21 1 2281.1074 Q9Y241 Q9Y241 2 22 HIGD1A HIG1 domain family member 1A, mitochondrial yes yes 2;3 5.7584E-05 159 By MS/MS 7.57 3.85 1 1 5 7 37038000 37038000 0 13252 2866 14081 33530;33531;33532;33533;33534;33535;33536 23647;23648;23649;23650;23651;23652;23653 23649 7 38842000 0 STDTGVSLPSYEEDQGSKLIRK ______________________________ LPSYEEDQGSKLIRKAKEAPFVPVGIAGFA M S T R K A 0 1 0 2 0 1 2 2 0 1 2 2 0 0 1 4 2 0 1 1 0 0 22 2 2409.2023 Q9Y241 Q9Y241 2 23 HIGD1A HIG1 domain family member 1A, mitochondrial yes yes 2;3 0.00025443 91.076 By MS/MS 10 0 2 2 10723000 10723000 0 13253 2866 14082 33537;33538 23654;23655;23656 23656 3 11397000 0 STDYGIFQINSR SGYNTRATNYNAGDRSTDYGIFQINSRYWC GDRSTDYGIFQINSRYWCNDGKTPGAVNAC R S T S R Y 0 1 1 1 0 1 0 1 0 2 0 0 0 1 0 2 1 0 1 0 0 0 12 0 1399.6732 P61626 P61626 69 80 LYZ Lysozyme C yes yes 2 0.0017593 124.67 By MS/MS By MS/MS 6.14 3.52 2 1 1 1 2 2 5 416780 145790 271000 13254 1104 14083 33539;33540;33541;33542;33543;33544;33545 23657;23658;23659;23660;23661 23658 5 80195 2833200 STELLIR RPGTVALREIRRYQKSTELLIRKLPFQRLV REIRRYQKSTELLIRKLPFQRLVREIAQDF K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 Q71DI3;Q16695;P84243;P68431;Q6NXT2 Q71DI3 58 64 HIST2H3A;HIST3H3;H3F3A;HIST1H3A;H3F3C Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 0.0078755 162.51 By MS/MS 10 0 1 1 1238600 1238600 0 13255 1189 14084 33546 23662 23662 1 1316400 0 STEPELIQVK GAGLLQNYVDRTESRSTEPELIQVKSELPL RTESRSTEPELIQVKSELPLDPLPVPTEEG R S T V K S 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1142.6183 Q15758 Q15758 493 502 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.00037614 149.82 By MS/MS By matching 5.7 2.69 1 1 2 1 1 1 1 1 1 9 1 32320000 32291000 29135 13256 1518 14085 33547;33548;33549;33550;33551;33552;33553;33554;33555;33556 23663;23664;23665;23666;23667;23668;23669;23670;23671 23665 9 1887900 60879 STESLQANVQR ARTIGISVDPRRRNKSTESLQANVQRLKEY RRNKSTESLQANVQRLKEYRSKLILFPRKP K S T Q R L 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1231.6157 P26373 P26373 106 116 RPL13 60S ribosomal protein L13 yes yes 2 1.7937E-31 251.56 By MS/MS 8 0 1 1 0 0 0 13257 695 14086 33557 23672 23672 1 0 0 STETALYR HAELSKLVKKHAAQRSTETALYRKMLGNPS KKHAAQRSTETALYRKMLGNPSRLPAKCPG R S T Y R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 1 0 0 0 8 0 939.46616 Q14318 Q14318 358 365 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 0.0018492 159.2 By MS/MS 6.5 0.5 1 1 2 6894400 6894400 0 13258 1428 14087 33558;33559 23673 23673 1 55456 0 STFVLDEFK AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE FAHLPKSTFVLDEFKRKYSNEDTLSVALPY K S T F K R 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 1 0 0 1 0 0 9 0 1084.5441 P26641 P26641 286 294 EEF1G Elongation factor 1-gamma yes yes 2 0.00077 147.29 By MS/MS 8 1.41 1 1 1 1 1 5 8300400 8300400 0 13259 700 14088 33560;33561;33562;33563;33564 23674;23675 23674 2 214090 0 STFVLDEFKR AAEPKAKDPFAHLPKSTFVLDEFKRKYSNE AHLPKSTFVLDEFKRKYSNEDTLSVALPYF K S T K R K 0 1 0 1 0 0 1 0 0 0 1 1 0 2 0 1 1 0 0 1 0 0 10 1 1240.6452 P26641 P26641 286 295 EEF1G Elongation factor 1-gamma yes yes 2;3 4.3292E-06 181.41 By MS/MS 8 1.41 2 2 2 2 2 10 161080000 161080000 0 13260 700 14089 33565;33566;33567;33568;33569;33570;33571;33572;33573;33574 23676;23677;23678;23679;23680;23681 23678 6 2645100 0 STGCDFAVSPK LIELWEGLTVDDVQKSTGCDFAVSPKLMPM DVQKSTGCDFAVSPKLMPMQQIAN______ K S T P K L 1 0 0 1 1 0 0 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 11 0 1167.523 P55809 P55809 501 511 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 2 0.00037736 147.73 By MS/MS 6 0 1 1 6014100 6014100 0 13261 1038 14090 33575 23682 23682 1 46898 0 STGEAFVQFASQEIAEK IVPNGITLPVDFQGRSTGEAFVQFASQEIA GEAFVQFASQEIAEKALKKHKERIGHRYIE R S T E K A 3 0 0 0 0 2 3 1 0 1 0 1 0 2 0 2 1 0 0 1 0 0 17 0 1840.8843 P31943;P55795 P31943 151 167 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 2 5.4242E-11 173.33 By MS/MS 7.5 1.12 1 1 1 1 4 35894000 35894000 0 13262 758;1037 14091 33576;33577;33578;33579 23683;23684;23685 23684 3 359280 0 STGETIR ______________________________ PLSVFGDRSTGETIRSQNVMAAASIANIVK R S T I R S 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 7 0 762.38718 P17987 P17987 12 18 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.0066137 170.73 By MS/MS By matching 3.75 2.28 1 1 2 3 1 46428000 46353000 74521 13263 619 14092 33580;33581;33582;33583 23686;23687;23688 23686 3 444630 228550 STGFETLVVTSEDGITK SLESSSQVEPGTDRKSTGFETLVVTSEDGI GFETLVVTSEDGITKIMFNRPKKKNAINTE K S T T K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 0 2 4 0 0 2 0 0 17 0 1782.8887 O75521 O75521 136 152 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 2 1.1866E-13 182.1 By MS/MS 7.5 0.5 1 1 2 1178500 1178500 0 13264 314 14093 33584;33585 23689;23690 23689 2 36592 0 STGGAPTFNVTVTK SLLQDGEFSMDLRTKSTGGAPTFNVTVTKT KSTGGAPTFNVTVTKTDKTLVLLMGKEGVH K S T T K T 1 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 4 0 0 2 0 0 14 0 1378.7092 P07737 P07737 92 105 PFN1 Profilin-1 yes yes 2 0.00061799 130.69 By MS/MS 10 0 1 1 7125800 7125800 0 13265 491 14094 33586 23691 23691 1 7573900 0 STGGDFGNPLRK ______________________________ ______________________________ M S T R K F 0 1 1 1 0 0 0 3 0 0 1 1 0 1 1 1 1 0 0 0 0 0 12 1 1247.6258 P20340 P20340 2 13 RAB6A Ras-related protein Rab-6A yes yes 2 0.00048127 154.01 By MS/MS 9 0 1 1 2262700 2262700 0 13266 641 14095 33587 23692 23692 1 1298600 0 STGNFLTLTQAIDK RANGHLLLNSEKMSKSTGNFLTLTQAIDKF KSTGNFLTLTQAIDKFSADGMRLALADAGD K S T D K F 1 0 1 1 0 1 0 1 0 1 2 1 0 1 0 1 3 0 0 0 0 0 14 0 1507.7882 Q9P2J5 Q9P2J5 720 733 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 4.9313E-35 256.95 By MS/MS 3.5 0.5 1 1 2 2745200 2745200 0 13267 2738 14096 33588;33589 23693;23694 23694 2 72077 0 STGPTAATGSNR ______________________________ ______________________________ M S T N R R 2 1 1 0 0 0 0 2 0 0 0 0 0 0 1 2 3 0 0 0 0 0 12 0 1118.5316 Q15836 Q15836 2 13 VAMP3 Vesicle-associated membrane protein 3 yes yes 2 0.00011765 147.3 By MS/MS 10 0 1 1 220180 220180 0 13268 1526 14097 33590 23695 23695 1 234030 0 STGSATSLASQGER LENETEISESGMTVRSTGSATSLASQGERR RSTGSATSLASQGERRRRTLPQLPNEEKSL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 0 14 0 1350.6375 Q5SW79 Q5SW79 627 640 CEP170 Centrosomal protein of 170 kDa yes yes 2 2.3649E-12 207.95 By MS/MS By matching 2.33 0.471 2 1 2 1 3180200 3165900 14247 13269 1621 14098 33591;33592;33593 23696;23697 23696 2 128520 11994 STGSFVGELMYK VYPIDLVKTRMQNQRSTGSFVGELMYKNSF NQRSTGSFVGELMYKNSFDCFKKVLRYEGF R S T Y K N 0 0 0 0 0 0 1 2 0 0 1 1 1 1 0 2 1 0 1 1 0 0 12 0 1317.6275 Q9UJS0 Q9UJS0 361 372 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 4.3671E-07 182.64 By MS/MS 5 1.91 1 2 2 1 6 14466000 14466000 0 13270 2798 14099;14100 33594;33595;33596;33597;33598;33599 23698;23699;23700 23700 1628 3 548420 0 STGYMQQDLDVAK SALSSAYWSLGNTEKSTGYMQQDLDVAKTL EKSTGYMQQDLDVAKTLGDQTGECRAHGNL K S T A K T 1 0 0 2 0 2 0 1 0 0 1 1 1 0 0 1 1 0 1 1 0 0 13 0 1454.6711 Q96AY4 Q96AY4 253 265 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.0022189 112.02 By MS/MS 2 0 1 1 0 0 0 13271 2125 14101 33600 23701 23701 1 0 0 STHGQLR PEWLAPGGKLYNLAKSTHGQLRTDKNYSFP GKLYNLAKSTHGQLRTDKNYSFPLNNLVCS K S T L R T 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 7 0 797.4144 Q96JH7 Q96JH7 497 503 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.042356 106.42 By MS/MS 3 0.816 1 1 1 3 423980 423980 0 13272 2209 14102 33601;33602;33603 23702 23702 1 11938 0 STHIATK FPPSAIYTRKDLLQRSTHIATKTFQALRIF TRKDLLQRSTHIATKTFQALRIFVNNELNE R S T T K T 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 2 0 0 0 0 0 7 0 756.413 A6NJ78 A6NJ78 277 283 METTL15 Probable methyltransferase-like protein 15 yes yes 2 0.050113 101.33 By MS/MS 6.5 0.5 1 1 2 1103900 1103900 0 13273 24 14103 33604;33605 23703 23703 1 15297 0 STIETALK LANILEVCRSKHMPKSTIETALKMEKSKDT RSKHMPKSTIETALKMEKSKDTYLLYEGRG K S T L K M 1 0 0 0 0 0 1 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 8 0 861.48075 Q9BSH4 Q9BSH4 120 127 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2 0.012155 116.9 By MS/MS 8 0 1 1 2515700 2515700 0 13274 2337 14104 33606 23704 23704 1 165960 0 STIETALKMEK LANILEVCRSKHMPKSTIETALKMEKSKDT HMPKSTIETALKMEKSKDTYLLYEGRGPGG K S T E K S 1 0 0 0 0 0 2 0 0 1 1 2 1 0 0 1 2 0 0 0 0 0 11 1 1249.6588 Q9BSH4 Q9BSH4 120 130 TACO1 Translational activator of cytochrome c oxidase 1 yes yes 2 0.03147 110.84 By MS/MS 8 0 1 1 1616700 1616700 0 13275 2337 14105 33607 23705 23705 1 106650 0 STIFYYVQK LGTTREVELPLTNFRSTIFYYVQKLLQLSC PLTNFRSTIFYYVQKLLQLSCNGNVKSDKL R S T Q K L 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 0 2 1 0 0 9 0 1147.5914 Q9ULT8 Q9ULT8 1841 1849 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0098498 105.14 By MS/MS 3 0.816 1 1 1 3 534910 534910 0 13276 2826 14106 33608;33609;33610 23706;23707 23706 2 19391 0 STIIGESISR SSPNIAKEMHVGHLRSTIIGESISRLFEFA VGHLRSTIIGESISRLFEFAGYDVLRLNHV R S T S R L 0 1 0 0 0 0 1 1 0 3 0 0 0 0 0 3 1 0 0 0 0 0 10 0 1061.5717 P54136 P54136 214 223 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 0.0001838 157.34 By MS/MS 5 0 1 1 6636000 6636000 0 13277 1013 14107 33611 23708 23708 1 272770 0 STIIGNFIANLK SSPNVAKKFHVGHLRSTIIGNFIANLKEAL HLRSTIIGNFIANLKEALGHQVIRINYLGD R S T L K E 1 0 2 0 0 0 0 1 0 3 1 1 0 1 0 1 1 0 0 0 0 0 12 0 1289.7343 Q5T160 Q5T160 147 158 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 1.7346E-35 250.06 By MS/MS 6 0 1 1 0 0 0 13278 1624 14108 33612 23709 23709 1 0 0 STKPGAAPTEHK EVLFGNLDLLPPPGKSTKPGAAPTEHKALV PGKSTKPGAAPTEHKALVSHNGSLINVGSL K S T H K A 2 0 0 0 0 0 1 1 1 0 0 2 0 0 2 1 2 0 0 0 0 0 12 1 1222.6306 Q8N163 Q8N163 789 800 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 0.022402 115.91 By MS/MS 3 0 1 1 379950 379950 0 13279 1895 14109 33613 23710 23710 1 9918.5 0 STLAEFQVIMGR PFRTPKAGIRTYHFRSTLAEFQVIMGRKRG HFRSTLAEFQVIMGRKRGNVEKGWLAKLGP R S T G R K 1 1 0 0 0 1 1 1 0 1 1 0 1 1 0 1 1 0 0 1 0 0 12 0 1350.6966 Q9Y4C2 Q9Y4C2 416 427 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 2.1899E-05 169.93 By MS/MS 1 0 1 1 123180 123180 0 13280 2952 14110 33614 23711 23711 1704 1 6018.3 0 STLEAETR KARLQRLEDELNRAKSTLEAETRVKQRLEC DELNRAKSTLEAETRVKQRLECEKQQIQND K S T T R V 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 8 0 905.44543 P15924 P15924 1841 1848 DSP Desmoplakin yes yes 2 0.0058691 133.86 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 610090 537200 72884 13281 603 14111 33615;33616 23712;23713 23713 2 26702 104460 STLENQNWR DVYFRKTKAATILTKSTLENQNWRATTLPT ATILTKSTLENQNWRATTLPTDFNYNVDTL K S T W R A 0 1 2 0 0 1 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 9 0 1146.5418 Q15003 Q15003 496 504 NCAPH Condensin complex subunit 2 yes yes 2 0.00036669 156.35 By MS/MS 4 0 1 1 743120 743120 0 13282 1457 14112 33617 23714 23714 1 20286 0 STLFNTLLESDYCTAK YRGDVYLVGATNAGKSTLFNTLLESDYCTA TLFNTLLESDYCTAKGSEAIDRATISPWPG K S T A K G 1 0 1 1 1 0 1 0 0 0 3 1 0 1 0 2 3 0 1 0 0 0 16 0 1861.8768 Q8NC60 Q8NC60 352 367 NOA1 Nitric oxide-associated protein 1 yes yes 2 1.7241E-14 246.25 By MS/MS 5 0.816 1 1 1 3 1310100 1310100 0 13283 1951 14113 33618;33619;33620 23715 23715 1 22516 0 STLIGEDVNPLIK RSSLFSRKLTALYTKSTLIGEDVNPLIKLD TKSTLIGEDVNPLIKLDDAVNVDEIMTDTS K S T I K L 0 0 1 1 0 0 1 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 13 0 1397.7766 P20585 P20585 337 349 MSH3 DNA mismatch repair protein Msh3 yes yes 2 0.0004443 138.22 By MS/MS 3.5 0.5 1 1 2 765760 765760 0 13284 642 14114 33621;33622 23716 23716 1 20071 0 STLLFGQR VICCSPSSYNESETKSTLLFGQRAKTIKNT YNESETKSTLLFGQRAKTIKNTVCVNVELT K S T Q R A 0 1 0 0 0 1 0 1 0 0 2 0 0 1 0 1 1 0 0 0 0 0 8 0 920.50797 P33176 P33176 314 321 KIF5B Kinesin-1 heavy chain yes yes 2 0.0016943 161.68 By MS/MS 4 0 1 1 1143300 1143300 0 13285 767 14115 33623 23717 23717 1 31211 0 STLLFSQGK DANAAQQELKLLLHRSTLLFSQGKMYGYVD KLLLHRSTLLFSQGKMYGYVDTLLTMLAML R S T G K M 0 0 0 0 0 1 0 1 0 0 2 1 0 1 0 2 1 0 0 0 0 0 9 0 979.53385 Q9Y5Q9 Q9Y5Q9 540 548 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 0.0078781 109.44 By MS/MS 4 0 1 1 1028600 1028600 0 13286 2978 14116 33624 23718 23718 1 28081 0 STLLLLLTGK MDSRICIVGPNGVGKSTLLLLLTGKLTPTH NGVGKSTLLLLLTGKLTPTHGEMRKNHRLK K S T G K L 0 0 0 0 0 0 0 1 0 0 5 1 0 0 0 1 2 0 0 0 0 0 10 0 1057.6747 Q8NE71 Q8NE71 665 674 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 2 0.02726 87.308 By MS/MS 4 0 1 1 56020 56020 0 13287 1963 14117 33625 23719 23719 1 1529.3 0 STLNEIYFGK ANIGRLVEDMENKIRSTLNEIYFGKTKDIV ENKIRSTLNEIYFGKTKDIVNGLRSIDAIP R S T G K T 0 0 1 0 0 0 1 1 0 1 1 1 0 1 0 1 1 0 1 0 0 0 10 0 1170.5921 P47756 P47756 226 235 CAPZB F-actin-capping protein subunit beta yes yes 2 1.244E-10 204.79 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 4518400 4518400 0 13288 895 14118 33626;33627;33628;33629 23720;23721;23722 23721 3 435310 0 STLQTLPEIVAK AMYLPDTLSPADQLKSTLQTLPEIVAKEAQ QLKSTLQTLPEIVAKEAQVKVAEVEGEQVD K S T A K E 1 0 0 0 0 1 1 0 0 1 2 1 0 0 1 1 2 0 0 1 0 0 12 0 1298.7446 O95202 O95202 435 446 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.0003726 144.55 By MS/MS 5.5 1.12 1 1 1 1 4 6202500 6202500 0 13289 374 14119 33630;33631;33632;33633 23723 23723 1 194200 0 STLSNQLLGR RVLRVVLLGAPNAGKSTLSNQLLGRKVFPV PNAGKSTLSNQLLGRKVFPVSRKVHTTRCQ K S T G R K 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 10 0 1087.5986 O75616 O75616 127 136 ERAL1 GTPase Era, mitochondrial yes yes 2 4.4754E-06 188.66 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 683860 633330 50526 13290 321 14120 33634;33635;33636;33637;33638 23724;23725 23724 2 219690 207420 STLTDSLVCK NIRNMSVIAHVDHGKSTLTDSLVCKAGIIA VDHGKSTLTDSLVCKAGIIASARAGETRFT K S T C K A 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 10 0 1122.5591 P13639 P13639 33 42 EEF2 Elongation factor 2 yes yes 2 7.787E-07 185.72 By MS/MS By matching 5.6 1.02 1 1 2 1 4 1 47831000 47819000 11746 13291 576 14121 33639;33640;33641;33642;33643 23726;23727;23728;23729 23726 4 1239600 36023 STLYVSPHPDAFPSLR ______________________________ TLYVSPHPDAFPSLRALIAARYGEAGEGPG M S T L R A 1 1 0 1 0 0 0 0 1 0 2 0 0 1 3 3 1 0 1 1 0 0 16 0 1785.905 P26640 P26640 2 17 VARS Valine--tRNA ligase yes yes 2 3.369E-29 238.01 By MS/MS 7 2.55 1 1 1 1 4 4500000 4500000 0 13292 699 14122 33644;33645;33646;33647 23730;23731;23732 23730 3 430680 0 STMQELNSR GAGGGDGGILTANEKSTMQELNSRLASYLD LTANEKSTMQELNSRLASYLDKVQALEEAN K S T S R L 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 9 0 1064.4921 P35527;CON__P35527 P35527 155 163 KRT9 Keratin, type I cytoskeletal 9 yes no 2 1.3363E-11 223.32 By MS/MS By MS/MS 5 2.83 3 2 2 2 3 1 2 2 2 1 11 9 33376000 14769000 18607000 + 13293 791 14123;14124 33648;33649;33650;33651;33652;33653;33654;33655;33656;33657;33658;33659;33660;33661;33662;33663;33664;33665;33666;33667 23733;23734;23735;23736;23737;23738;23739;23740;23741;23742;23743;23744;23745;23746;23747;23748;23749;23750;23751 23743 536 19 2301800 45855000 STNENANTPAAR ______________________________ ______________________________ M S T A R L 3 1 3 0 0 0 1 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 12 0 1244.5745 P52292 P52292 2 13 KPNA2 Importin subunit alpha-1 yes yes 2 8.3485E-08 188.99 By MS/MS By matching 7.8 1.6 2 1 1 1 4 1 11656000 11610000 46284 13294 983 14125 33668;33669;33670;33671;33672 23752;23753;23754 23754 3 569130 141950 STNGDTFLGGEDFDQALLR DISILEIQKGVFEVKSTNGDTFLGGEDFDQ DTFLGGEDFDQALLRHIVKEFKRETGVDLT K S T L R H 1 1 1 3 0 1 1 3 0 0 3 0 0 2 0 1 2 0 0 0 0 0 19 0 2054.9545 P38646 P38646 266 284 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 3.8408E-44 256.35 By MS/MS 5.38 1.49 1 1 3 1 1 1 8 16249000 16249000 0 13295 820 14126 33673;33674;33675;33676;33677;33678;33679;33680 23755;23756;23757;23758;23759;23760 23756 6 562780 0 STNLNCSVIADVR STRTFLQTVSSEKVRSTNLNCSVIADVRHD VRSTNLNCSVIADVRHDGSEPCVDVLFGDG R S T V R H 1 1 2 1 1 0 0 0 0 1 1 0 0 0 0 2 1 0 0 2 0 0 13 0 1447.7089 Q96EL3 Q96EL3 44 56 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 6.4143E-26 249.2 By MS/MS 10 0 1 1 1865300 1865300 0 13296 2163 14127 33681 23761 23761 1 1982600 0 STPAITLESPDIK PVWFLYSLLMKLFQRSTPAITLESPDIKYP QRSTPAITLESPDIKYPLRLIDREIISHDT R S T I K Y 1 0 0 1 0 0 1 0 0 2 1 1 0 0 2 2 2 0 0 0 0 0 13 0 1370.7293 P00387 P00387 30 42 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 2 0.0031611 113.44 By MS/MS 8 0 1 1 1631100 1631100 0 13297 427 14128 33682 23762 23762 1 107610 0 STPAVPQDLQLPPSQR ______________________________ TPAVPQDLQLPPSQRAQSAFKEQRRQKLKE M S T Q R A 1 1 0 1 0 3 0 0 0 0 2 0 0 0 4 2 1 0 0 1 0 0 16 0 1732.9108 Q8WWK9 Q8WWK9 2 17 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.024167 62.298 By MS/MS 5 0 1 1 1142500 1142500 0 13298 2040 14129 33683 23763 23763 1 46962 0 STPKEDDSSASTSQSTR DRGPPQRPKLNLKPRSTPKEDDSSASTSQS PKEDDSSASTSQSTRAASIFGGAKPVDTAA R S T T R A 1 1 0 2 0 1 1 0 0 0 0 1 0 0 1 6 3 0 0 0 0 0 17 1 1782.7868 P23588 P23588 340 356 EIF4B Eukaryotic translation initiation factor 4B yes yes 2;3 9.3546E-06 143.97 By MS/MS By MS/MS 5.78 0.786 4 3 2 4 5 3799800 2998000 801710 13299 672 14130 33684;33685;33686;33687;33688;33689;33690;33691;33692 23764;23765;23766;23767;23768 23768 5 74580 2423700 STPVTVVLPDTK TDILFTEQERGVGIKSTPVTVVLPDTKGKS GIKSTPVTVVLPDTKGKSYLFNIMDTPGHV K S T T K G 0 0 0 1 0 0 0 0 0 0 1 1 0 0 2 1 3 0 0 3 0 0 12 0 1255.7024 Q15029 Q15029 183 194 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.037308 78.342 By MS/MS 4 0 1 1 3001200 3001200 0 13300 1466 14131 33693 23769 23769 1 81928 0 STQAPLIIRPDSGNPLDTVLK EKIWGEDLRHLIVSRSTQAPLIIRPDSGNP IIRPDSGNPLDTVLKVLEILGKKFPVTENS R S T L K V 1 1 1 2 0 1 0 1 0 2 3 1 0 0 3 2 2 0 0 1 0 0 21 1 2234.227 P43490 P43490 303 323 NAMPT Nicotinamide phosphoribosyltransferase yes yes 3 0.0051485 69.024 By MS/MS 6 0 1 1 4161500 4161500 0 13301 866 14132 33694 23770;23771 23771 2 32452 0 STQIATVHCSAQTTSR CGKGMLLRYAFSQLRSTQIATVHCSAQTTS TQIATVHCSAQTTSRHLLQKLSQTCMVIST R S T S R H 2 1 0 0 1 2 0 0 1 1 0 0 0 0 0 3 4 0 0 1 0 0 16 0 1746.8319 Q8NCM8 Q8NCM8 2310 2325 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 3 0.019898 71.601 By MS/MS 1.5 0.5 1 1 2 706380 706380 0 13302 1954 14133 33695;33696 23772 23772 1 34612 0 STSLDVEPIYTFR TLKMWNLQKTAPAKKSTSLDVEPIYTFRAH KKSTSLDVEPIYTFRAHKGPVLCVVMSSNG K S T F R A 0 1 0 1 0 0 1 0 0 1 1 0 0 1 1 2 2 0 1 1 0 0 13 0 1526.7617 O43815 O43815 501 513 STRN Striatin yes yes 2 0.0006409 135.8 By MS/MS 4.5 0.5 1 1 2 1098500 1098500 0 13303 225 14134 33697;33698 23773 23773 1 31998 0 STSPPNHAEAIVK EEGTEAVGLAFESTRSTSPPNHAEAIVKTL TRSTSPPNHAEAIVKTLQELQKLHVSEQNA R S T V K T 2 0 1 0 0 0 1 0 1 1 0 1 0 0 2 2 1 0 0 1 0 0 13 0 1349.6939 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 312 324 yes yes 2 0.019084 83.182 By MS/MS 1.5 0.5 1 1 2 311560 311560 0 + 13304 31 14135 33699;33700 23774 23774 1 15344 0 STSSFSCLSR GFSSGSAVVSGGSRRSTSSFSCLSRHGGGG GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS R S T S R H 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 0 10 0 1130.5026 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 36 45 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 7.2414E-07 186.41 By MS/MS By MS/MS 5.11 2.75 2 2 2 2 2 2 2 1 2 1 9 9 46256000 27268000 18987000 + 13305 52 14136 33701;33702;33703;33704;33705;33706;33707;33708;33709;33710;33711;33712;33713;33714;33715;33716;33717;33718 23775;23776;23777;23778;23779;23780;23781;23782;23783;23784;23785;23786;23787;23788;23789;23790 23784 16 2083100 131610000 STSTPTSPGPR AKEFNPTKPLLSVNKSTSTPTSPGPRTHST SVNKSTSTPTSPGPRTHSTPSIPVLTAGQS K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 Q8WWM7 Q8WWM7 678 688 ATXN2L Ataxin-2-like protein yes yes 2 0.02633 83.647 By MS/MS By matching 3.33 0.471 2 1 2 1 1149900 1136600 13285 13306 2041 14137 33719;33720;33721 23791 23791 1 29987 19040 STSVNLNQASGAVGSAK SESTEAAAISGLQKRSTSVNLNQASGAVGS SVNLNQASGAVGSAKSLPEINKDRMHLILG R S T A K S 3 0 2 0 0 1 0 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 17 0 1589.8009 Q9P2D3 Q9P2D3 1562 1578 HEATR5B HEAT repeat-containing protein 5B yes yes 2 5.3598E-19 247.93 By MS/MS 2 0 1 1 353490 353490 0 13307 2736 14138 33722 23792 23792 1 17570 0 STTELPLTVSYDK DQLSNRVKDLMVINRSTTELPLTVSYDKVS NRSTTELPLTVSYDKVSLGRLRFWIHMQDA R S T D K V 0 0 0 1 0 0 1 0 0 0 2 1 0 0 1 2 3 0 1 1 0 0 13 0 1452.7348 Q96KA5 Q96KA5 231 243 CLPTM1L Cleft lip and palate transmembrane protein 1-like protein yes yes 2 0.0052747 101.93 By MS/MS 1.5 0.5 1 1 2 306180 306180 0 13308 2217 14139 33723;33724 23793 23793 1 15014 0 STTGAPSTTADSK GGTVSGPSSACKPGRSTTGAPSTTADSKLS GRSTTGAPSTTADSKLSNQVSTIVSLLSTL R S T S K L 2 0 0 1 0 0 0 1 0 0 0 1 0 0 1 3 4 0 0 0 0 0 13 0 1222.5677 Q9ULT8 Q9ULT8 259 271 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0054653 110.54 By MS/MS 2.5 1.12 1 1 1 1 4 1260800 1260800 0 13309 2826 14140 33725;33726;33727;33728 23794;23795 23794 2 56405 0 STTLFSR MPQDSVPSPRSLQGKSTTLFSRHTKAIVWG SPRSLQGKSTTLFSRHTKAIVWGMQTRAVQ K S T S R H 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 2 2 0 0 0 0 0 7 0 810.42357 P53396 P53396 489 495 ACLY ATP-citrate synthase yes yes 2 0.036285 110.61 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 11051000 11051000 0 13310 1001 14141 33729;33730;33731;33732;33733;33734 23796 23796 1 313640 0 STTQVADSGYQR IIERLEQELKQIVKRSTTQVADSGYQRGEN VKRSTTQVADSGYQRGENVTVENQPRLLLE R S T Q R G 1 1 0 1 0 2 0 1 0 0 0 0 0 0 0 2 2 0 1 1 0 0 12 0 1311.6055 Q96A65 Q96A65 314 325 EXOC4 Exocyst complex component 4 yes yes 2 5.7516E-07 178.53 By MS/MS By matching 4 0 2 1 1 2053500 2036900 16658 13311 2118 14142 33735;33736 23797 23797 1 55604 34807 STTSTIESFAAQEK MKLVEQLKEERELLRSTTSTIESFAAQEKQ RSTTSTIESFAAQEKQMEVCEVCGAFLIVG R S T E K Q 2 0 0 0 0 1 2 0 0 1 0 1 0 1 0 3 3 0 0 0 0 0 14 0 1498.7151 O95232 O95232 174 187 LUC7L3 Luc7-like protein 3 yes yes 2 0.0096499 107.34 By MS/MS 6 0 1 1 1359600 1359600 0 13312 376 14143 33737 23798 23798 0 10602 0 STTTGHLIYK THINIVVIGHVDSGKSTTTGHLIYKCGGID VDSGKSTTTGHLIYKCGGIDKRTIEKFEKE K S T Y K C 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 1 0 0 0 10 0 1119.5924 Q5VTE0;P68104;Q05639 Q5VTE0 21 30 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.011059 98.582 By MS/MS 6 2 1 1 1 1 1 5 111860000 111860000 0 13313 1184 14144 33738;33739;33740;33741;33742 23799;23800;23801 23800 3 1836100 0 STTTSDPPNICK LSGAGTYTTSSLSTKSTTTSDPPNICKVKP STKSTTTSDPPNICKVKPQQLQTSSLPSAS K S T C K V 0 0 1 1 1 0 0 0 0 1 0 1 0 0 2 2 3 0 0 0 0 0 12 0 1319.6027 Q9Y520 Q9Y520 2330 2341 PRRC2C Protein PRRC2C yes yes 2 0.022582 83 By MS/MS 1 0 1 1 237430 237430 0 13314 2963 14145 33743 23802 23802 1 11600 0 STVAQLVK KKKLYCIYVAIGQKRSTVAQLVKRLTDADA VAIGQKRSTVAQLVKRLTDADAMKYTIVVS R S T V K R 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 8 0 844.50182 P25705 P25705 254 261 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0041329 141.52 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 81893000 81541000 351320 13315 687 14146 33744;33745;33746;33747;33748 23803;23804;23805 23803 3 727550 1077500 STVDAPTAAGR ACLIVSVDETIKNPRSTVDAPTAAGRGRGR KNPRSTVDAPTAAGRGRGRGRPH_______ R S T G R G 3 1 0 1 0 0 0 1 0 0 0 0 0 0 1 1 2 0 0 1 0 0 11 0 1044.52 Q99832 Q99832 525 535 CCT7 T-complex protein 1 subunit eta yes yes 2 1.3518E-29 265.06 By MS/MS By matching 6 0 2 1 1 13237000 13209000 28796 13316 2295 14147 33749;33750 23806 23806 1 103000 88315 STVLQQQYNR DEESTMLEDSVSPKKSTVLQQQYNRVGKVE VSPKKSTVLQQQYNRVGKVEHGSVALPAIM K S T N R V 0 1 1 0 0 3 0 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 10 0 1235.6258 Q9Y490 Q9Y490 429 438 TLN1 Talin-1 yes yes 2 9.2069E-11 207.29 By MS/MS 2 0 1 1 592820 592820 0 13317 2947 14148 33751 23807 23807 1 29466 0 STVLTPMFVETQASQGTLQTR CEFQEYTIDSDWRFRSTVLTPMFVETQASQ MFVETQASQGTLQTRTQEGSLSARWPVAGQ R S T T R T 1 1 0 0 0 3 1 1 0 0 2 0 1 1 1 2 5 0 0 2 0 0 21 0 2294.1576 P78527 P78527 2599 2619 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 0.00044692 99.747 By MS/MS 1.8 0.748 2 2 1 5 2669500 2669500 0 13318 1197 14149 33752;33753;33754;33755;33756 23808;23809;23810;23811 23810 978 4 125770 0 STVVPVPYEK VEDYFCFCYGKALGKSTVVPVPYEKMLRDQ KALGKSTVVPVPYEKMLRDQSAVVVQGLPE K S T E K M 0 0 0 0 0 0 1 0 0 0 0 1 0 0 2 1 1 0 1 3 0 0 10 0 1117.6019 P78347 P78347 131 140 GTF2I General transcription factor II-I yes yes 2 0.0049627 107.57 By MS/MS 3.5 0.5 1 1 2 6162900 6162900 0 13319 1194 14150 33757;33758 23812 23812 1 161320 0 STYCLLNGLTDR QHQKTFIGKIPIMLRSTYCLLNGLTDRDLC MLRSTYCLLNGLTDRDLCELNECPLDPGGY R S T D R D 0 1 1 1 1 0 0 1 0 0 3 0 0 0 0 1 2 0 1 0 0 0 12 0 1411.6766 P30876 P30876 158 169 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.00045287 140.78 By MS/MS 3 0 1 1 513430 513430 0 13320 748 14151 33759 23813 23813 1 13403 0 SVAPAAPTSCDFSPGDLVWAK ASPPKAKNLNGGLRRSVAPAAPTSCDFSPG PTSCDFSPGDLVWAKMEGYPWWPCLVYNHP R S V A K M 4 0 0 2 1 0 0 1 0 0 1 1 0 1 3 3 1 1 0 2 0 0 21 0 2175.0307 P52701 P52701 79 99 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.00054831 101.3 By MS/MS 2.5 0.5 1 1 2 290800 290800 0 13321 989 14152 33760;33761 23814 23814 1 8859.5 0 SVAQYTGGIAK VQPAWGSAEAVDIDRSVAQYTGGIAKLERD DIDRSVAQYTGGIAKLERDMSNVSLGPTPI R S V A K L 2 0 0 0 0 1 0 2 0 1 0 1 0 0 0 1 1 0 1 1 0 0 11 0 1093.5768 Q10713 Q10713 289 299 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 2 0.0010579 132.88 By MS/MS 7 1.41 1 1 1 1 1 5 8653900 8653900 0 13322 1301 14153 33762;33763;33764;33765;33766 23815 23815 1 135060 0 SVCLIGDKEQR HNWMSEFKRWVPTLRSVCLIGDKEQRAAFV PTLRSVCLIGDKEQRAAFVRDVLLPGEWDV R S V Q R A 0 1 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 11 1 1303.6554 O60264 O60264 257 267 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.012982 123.51 By MS/MS 3.5 0.5 1 1 2 801070 801070 0 13323 240 14154 33767;33768 23816 23816 1 21032 0 SVCTEAGMFAIR LLARLCPNSTGAEIRSVCTEAGMFAIRARR EIRSVCTEAGMFAIRARRKIATEKDFLEAV R S V I R A 2 1 0 0 1 0 1 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 12 0 1340.6217 P35998 P35998 387 398 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.00021335 147.4 By MS/MS 8.33 1.25 1 1 1 3 2965500 2965500 0 13324 801 14155 33769;33770;33771 23817;23818 23818 548 2 336930 0 SVDEALR GVLRQITVNDLPVGRSVDEALRLVQAFQYT VNDLPVGRSVDEALRLVQAFQYTDEHGEVC R S V L R L 1 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 7 0 788.40283 P32119 P32119 151 157 PRDX2 Peroxiredoxin-2 yes yes 2 0.017211 134.06 By MS/MS By matching 9 0 2 1 1 1485500 1446000 39477 13325 763 14156 33772;33773 23819 23819 1 829880 425450 SVDFLLDSSLR LGLLTIPIIIHPIDRSVDFLLDSSLRKLYP PIDRSVDFLLDSSLRKLYPTVGKPSSS___ R S V L R K 0 1 0 2 0 0 0 0 0 0 3 0 0 1 0 3 0 0 0 1 0 0 11 0 1250.6507 Q9UDX5 Q9UDX5 144 154 MTFP1 Mitochondrial fission process protein 1 yes yes 2 5.4488E-07 223.36 By MS/MS 9.5 0.5 1 1 2 4342300 4342300 0 13326 2763 14157 33774;33775 23820 23820 1 2515200 0 SVDNRPQAPLVSASAVNEEVSK ISQKSVDIHDSIQPRSVDNRPQAPLVSASA APLVSASAVNEEVSKIKSTAKFPEQKLFAA R S V S K I 3 1 2 1 0 1 2 0 0 0 1 1 0 0 2 4 0 0 0 4 0 0 22 1 2296.1659 Q9Y6D6 Q9Y6D6 1580 1601 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 3 0.00060568 81.48 By MS/MS 2.5 0.5 1 1 2 853450 853450 0 13327 3003 14158 33776;33777 23821;23822 23821 2 30422 0 SVDPENNPTLVEVLEGVVR EVTEAVLFIMAAIAKSVDPENNPTLVEVLE ENNPTLVEVLEGVVRLPETVHTAVRYTSIE K S V V R L 0 1 2 1 0 0 3 1 0 0 2 0 0 0 2 1 1 0 0 5 0 0 19 0 2065.0691 Q9Y5L0 Q9Y5L0 450 468 TNPO3 Transportin-3 yes yes 2 0.003649 91.743 By MS/MS 4 0 1 1 98611 98611 0 13328 2974 14159 33778 23823 23823 1 2692 0 SVDVILDDDLVDKAKPGDR IQEMPEKAPAGQLPRSVDVILDDDLVDKAK ILDDDLVDKAKPGDRVQVVGTYRCLPGKKG R S V D R V 1 1 0 6 0 0 0 1 0 1 2 2 0 0 1 1 0 0 0 3 0 0 19 2 2069.0641 P25205 P25205 216 234 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.014281 67.994 By MS/MS 4 0 1 1 1643200 1643200 0 13329 683 14160 33779 23824 23824 1 44856 0 SVEEDYVTNIR FKNEYKGMLLQKVEKSVEEDYVTNIRNNCW KVEKSVEEDYVTNIRNNCWKERQQKTDMQY K S V I R N 0 1 1 1 0 0 2 0 0 1 0 0 0 0 0 1 1 0 1 2 0 0 11 0 1323.6307 Q8TBM8 Q8TBM8 319 329 DNAJB14 DnaJ homolog subfamily B member 14 yes yes 2 2.6303E-07 190.96 By MS/MS 8 0.816 1 1 1 3 3461900 3461900 0 13330 1989 14161 33780;33781;33782 23825 23825 1 128760 0 SVEEISTLVQK EYLNGAVREESIHCKSVEEISTLVQKLADQ IHCKSVEEISTLVQKLADQSGLDVIRIRKP K S V Q K L 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 2 1 0 0 2 0 0 11 0 1231.666 Q8N983 Q8N983 93 103 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 5.6809E-11 208.11 By MS/MS By matching 9.67 0.471 1 2 2 1 4655800 4628500 27383 13331 1935 14162 33783;33784;33785 23826;23827 23827 2 4784000 702360 SVEELLEAELLK EELKKVIHEKDGKIKSVEELLEAELLKVAN KIKSVEELLEAELLKVANKEKTVQDLKQEI K S V L K V 1 0 0 0 0 0 4 0 0 0 4 1 0 0 0 1 0 0 0 1 0 0 12 0 1371.7497 Q86UP2 Q86UP2 812 823 KTN1 Kinectin yes yes 2 0.0094719 97.597 By MS/MS 3 0 1 1 32862 32862 0 13332 1823 14163 33786 23828;23829 23829 2 857.88 0 SVEEPTQPGGTGLSDSR NPRMKRASSLNFLNKSVEEPTQPGGTGLSD EEPTQPGGTGLSDSRTLSSSSMDLSRRSSL K S V S R T 0 1 0 1 0 1 2 3 0 0 1 0 0 0 2 3 2 0 0 1 0 0 17 0 1715.7962 Q9H0B6 Q9H0B6 589 605 KLC2 Kinesin light chain 2 yes yes 2 8.0369E-19 209.39 By MS/MS 5 0 1 1 1707100 1707100 0 13333 2451 14164 33787 23830 23830 1 70168 0 SVEEVASEIQPFLR LIDKTTLDKLLKGKKSVEEVASEIQPFLRG KSVEEVASEIQPFLRGAGSIAGASASPKEK K S V L R G 1 1 0 0 0 1 3 0 0 1 1 0 0 1 1 2 0 0 0 2 0 0 14 0 1602.8253 P15924 P15924 2000 2013 DSP Desmoplakin yes yes 2 0.019937 102.53 By MS/MS 2.5 0.5 1 1 2 206690 206690 0 13334 603 14165 33788;33789 23831;23832 23831 2 7811 0 SVEITTDNILEGR QVPYHLVLQDLQLTRSVEITTDNILEGRIQ TRSVEITTDNILEGRIQVPFPTQRSDSIRP R S V G R I 0 1 1 1 0 0 2 1 0 2 1 0 0 0 0 1 2 0 0 1 0 0 13 0 1445.7362 Q9UKV5 Q9UKV5 485 497 AMFR E3 ubiquitin-protein ligase AMFR yes yes 2 5.9359E-08 190.53 By MS/MS 1.5 0.5 1 1 2 532750 532750 0 13335 2817 14166 33790;33791 23833;23834 23833 2 26141 0 SVEVEGYGSK GPKKKKVTLHIKWPKSVEVEGYGSKKIDAE IKWPKSVEVEGYGSKKIDAERQAAAAACQL K S V S K K 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 2 0 0 1 2 0 0 10 0 1053.4979 Q7L2E3 Q7L2E3 96 105 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.00084921 129.85 By MS/MS By matching 3.33 0.471 2 1 2 1 4554800 4514300 40465 13336 1763 14167 33792;33793;33794 23835;23836 23835 2 118980 57995 SVFMSSTTSASGTGR YLIKPLNKTYLEVVRSVFMSSTTSASGTGR SVFMSSTTSASGTGRKRTIKDLQEEVSNLY R S V G R K 1 1 0 0 0 0 0 2 0 0 0 0 1 1 0 5 3 0 0 1 0 0 15 0 1474.6722 O94874 O94874 519 533 UFL1 E3 UFM1-protein ligase 1 yes yes 2 5.9099E-21 228.83 By MS/MS 4.5 0.5 1 1 2 1369600 1369600 0 13337 354 14168 33795;33796 23837 23837 1 54947 0 SVFPEQANNNEWAR LHYSLYDQAEKLVSKSVFPEQANNNEWARY KSVFPEQANNNEWARYLYYTGRIKAIQLEY K S V A R Y 2 1 3 0 0 1 2 0 0 0 0 0 0 1 1 1 0 1 0 1 0 0 14 0 1660.7594 O43242 O43242 274 287 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 0.00055938 131.79 By MS/MS By matching 6 0 2 1 1 9934700 9896500 38268 13338 187 14169 33797;33798 23838 23838 1 77173 117370 SVGDGETVEFDVVEGEK HQTAIKKNNPRKYLRSVGDGETVEFDVVEG GDGETVEFDVVEGEKGAEAANVTGPGGVPV R S V E K G 0 0 0 2 0 0 4 3 0 0 0 1 0 1 0 1 1 0 0 4 0 0 17 0 1794.816 P67809;Q9Y2T7;P16989 P67809 102 118 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 yes no 2 4.8324E-14 190.1 By MS/MS 6.5 0.5 1 1 2 5326400 5326400 0 13339 1182 14170 33799;33800 23839 23839 1 44869 0 SVGDIEQELER KAQFPDSEPPRMELRSVGDIEQELERCKAS MELRSVGDIEQELERCKASIRRLEQEVNQE R S V E R C 0 1 0 1 0 1 3 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1273.615 P11274 P11274 27 37 BCR Breakpoint cluster region protein yes yes 2 6.6179E-16 215.72 By MS/MS 3 0 1 1 614460 614460 0 13340 551 14171 33801 23840 23840 1 16041 0 SVGDNSSDLSNVAVIDGNR GWHYLAYDWHWTTDRSVGDNSSDLSNVAVI NSSDLSNVAVIDGNRVLVTVFRQTVVPPPM R S V N R V 1 1 3 3 0 0 0 2 0 1 1 0 0 0 0 4 0 0 0 3 0 0 19 0 1917.9028 O95163 O95163 380 398 IKBKAP Elongator complex protein 1 yes yes 2 4.3703E-56 280.5 By MS/MS 2.6 1.02 1 1 2 1 5 2103100 2103100 0 13341 368 14172 33802;33803;33804;33805;33806 23841;23842;23843 23843 3 70546 0 SVGDVALSQIVR MLVTTPEKWDVVTRKSVGDVALSQIVRLLI TRKSVGDVALSQIVRLLILDEVHLLHEDRG K S V V R L 1 1 0 1 0 1 0 1 0 1 1 0 0 0 0 2 0 0 0 3 0 0 12 0 1242.6932 Q8N3C0 Q8N3C0 595 606 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.003805 134.3 By MS/MS 1 0 1 1 334220 334220 0 13342 1908 14173 33807 23844 23844 1 16329 0 SVGEVMGIGR SKFLRVSTKIGSCMKSVGEVMGIGRSFEEA GSCMKSVGEVMGIGRSFEEAFQKALRMVDE K S V G R S 0 1 0 0 0 0 1 3 0 1 0 0 1 0 0 1 0 0 0 2 0 0 10 0 1003.5121 P27708 P27708 761 770 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.1701E-10 205.36 By MS/MS 1.5 0.5 2 2 4 2118900 2118900 0 13343 709 14174;14175 33808;33809;33810;33811 23845;23846;23847;23848 23848 482 4 104530 0 SVGGSFYLQSK EVQKNYEHLFKVNDKSVGGSFYLQSKVVRA VNDKSVGGSFYLQSKVVRAKERLDEELKIQ K S V S K V 0 0 0 0 0 1 0 2 0 0 1 1 0 1 0 3 0 0 1 1 0 0 11 0 1171.5873 Q9Y3D7 Q9Y3D7 87 97 PAM16 Mitochondrial import inner membrane translocase subunit TIM16 yes yes 2 0.00048397 143.4 By MS/MS 10 0 1 1 947910 947910 0 13344 2933 14176 33812 23849 23849 1 1007500 0 SVGLANQELAEVVSR VPKDDLYNNLIVNPRSVGLANQELAEVVSR SVGLANQELAEVVSRAVSDGYSCVTLGGDH R S V S R A 2 1 1 0 0 1 2 1 0 0 2 0 0 0 0 2 0 0 0 3 0 0 15 0 1570.8315 P78540 P78540 91 105 ARG2 Arginase-2, mitochondrial yes yes 2 4.119E-07 193.11 By MS/MS 7.5 0.5 1 1 2 1214800 1214800 0 13345 1199 14177 33813;33814 23850 23850 1 35088 0 SVGNTIDPVILFQK QYLNKLSMKPEPLFRSVGNTIDPVILFQKM RSVGNTIDPVILFQKMGVGKLEMYVLNPVK R S V Q K M 0 0 1 1 0 1 0 1 0 2 1 1 0 1 1 1 1 0 0 2 0 0 14 0 1529.8453 P46821 P46821 401 414 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0027985 113.38 By MS/MS 1 0 1 1 37134 37134 0 13346 890 14178 33815 23851 23851 1 1814.3 0 SVHELEK TEMEDLMSSKDDVGKSVHELEKSKRALEQQ SSKDDVGKSVHELEKSKRALEQQVEEMKTQ K S V E K S 0 0 0 0 0 0 2 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 7 0 840.43413 P35579 P35579 1519 1525 MYH9 Myosin-9 yes yes 2 0.015168 139.68 By MS/MS 2 0 1 1 347690 347690 0 13347 793 14179 33816 23852 23852 1 17282 0 SVHICHVAR QTVAAVLMVAQLTQRSVHICHVARKEEILL AQLTQRSVHICHVARKEEILLIKAAKARGL R S V A R K 1 1 0 0 1 0 0 0 2 1 0 0 0 0 0 1 0 0 0 2 0 0 9 0 1077.5502 P27708 P27708 1609 1617 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 3 0.0093573 112.84 By MS/MS 1.5 0.5 1 1 2 1178600 1178600 0 13348 709 14180 33817;33818 23853;23854 23853 2 57836 0 SVHKVEPITK LATEKKQKSILYDERSVHKVEPITKHIGLV LYDERSVHKVEPITKHIGLVYSGMGPDYRV R S V T K H 0 0 0 0 0 0 1 0 1 1 0 2 0 0 1 1 1 0 0 2 0 0 10 1 1136.6554 P25787 P25787 61 70 PSMA2 Proteasome subunit alpha type-2 yes yes 2 0.0010576 160.75 By MS/MS 8.5 0.5 1 1 2 745140 745140 0 13349 689 14181 33819;33820 23855 23855 1 342660 0 SVHYCPATK GIVTKCSLVRPKVVRSVHYCPATKKTIERR RPKVVRSVHYCPATKKTIERRYSDLTTLVA R S V T K K 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 0 9 0 1061.4964 P25205 P25205 144 152 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0070861 111.17 By MS/MS 4 0 1 1 1252900 1252900 0 13350 683 14182 33821 23856 23856 1 34203 0 SVHYCPATKK GIVTKCSLVRPKVVRSVHYCPATKKTIERR PKVVRSVHYCPATKKTIERRYSDLTTLVAF R S V K K T 1 0 0 0 1 0 0 0 1 0 0 2 0 0 1 1 1 0 1 1 0 0 10 1 1189.5914 P25205 P25205 144 153 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.038373 80.24 By MS/MS 4 0 1 1 216270 216270 0 13351 683 14183 33822 23857 23857 1 5904 0 SVIDTSTIVR FSDEDEDDDVDGREKSVIDTSTIVRKKALP DGREKSVIDTSTIVRKKALPDSGEDRDTKE K S V V R K 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 2 2 0 0 2 0 0 10 0 1089.603 O43815 O43815 259 268 STRN Striatin yes yes 2 0.0043923 109.44 By MS/MS 4 0 1 1 815710 815710 0 13352 225 14184 33823 23858 23858 1 22268 0 SVIEQGGIQTVDQLIK VSGDTVPQSILTKSRSVIEQGGIQTVDQLI VIEQGGIQTVDQLIKELPELLQRNREILDE R S V I K E 0 0 0 1 0 3 1 2 0 3 1 1 0 0 0 1 1 0 0 2 0 0 16 0 1726.9465 Q8WUM4 Q8WUM4 423 438 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 1.6955E-63 300.49 By MS/MS 4.5 0.5 1 1 2 859560 859560 0 13353 2019 14185 33824;33825 23859 23859 1 24511 0 SVIGHLQTK TRDMGGYSTTTDFIKSVIGHLQTKGS____ TTDFIKSVIGHLQTKGS_____________ K S V T K G 0 0 0 0 0 1 0 1 1 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 981.56073 O43837 O43837 375 383 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 2 3.4207E-06 166.3 By MS/MS By matching 7 0 2 1 1 8567400 8556500 10878 13354 230 14186 33826;33827 23860 23860 1 152910 44657 SVILEAFSSPSEEVK EVGHHIDLSGQLELKSVILEAFSSPSEEVK SVILEAFSSPSEEVKSAASYALGSISVGNL K S V V K S 1 0 0 0 0 0 3 0 0 1 1 1 0 1 1 4 0 0 0 2 0 0 15 0 1620.8247 Q86VP6 Q86VP6 859 873 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 8.2248E-50 278.51 By MS/MS 4 0.707 1 2 1 4 8256900 8256900 0 13355 1829 14187 33828;33829;33830;33831 23861;23862;23863 23862 3 231960 0 SVLDKLSANQQNILK KVLDARGSNSLPLLRSVLDKLSANQQNILK SVLDKLSANQQNILKFIACNEIFLMPATVF R S V L K F 1 0 2 1 0 2 0 0 0 1 3 2 0 0 0 2 0 0 0 1 0 0 15 1 1669.9363 P57088 P57088 144 158 TMEM33 Transmembrane protein 33 yes yes 2 8.2115E-49 274.59 By MS/MS 9 0 1 1 1311800 1311800 0 13356 1053 14188 33832 23864 23864 1 752830 0 SVLEEIGLT IEQADLLQEEAETPRSVLEEIGLT______ EAETPRSVLEEIGLT_______________ R S V L T - 0 0 0 0 0 0 2 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 9 0 959.51753 P56377 P56377 149 157 AP1S2 AP-1 complex subunit sigma-2 yes yes 1 0.0089096 98.133 By MS/MS 9 0 1 1 111860 111860 0 13357 1043 14189 33833 23865 23865 1 64199 0 SVLELIPELNEK LLRNSRKQGKASTVKSVLELIPELNEKEEA TVKSVLELIPELNEKEEAYNSLMKSYVSEK K S V E K E 0 0 1 0 0 0 3 0 0 1 3 1 0 0 1 1 0 0 0 1 0 0 12 0 1382.7657 P42704 P42704 1306 1317 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0040562 110.84 By MS/MS 4 0.816 1 1 1 3 3147600 3147600 0 13358 854 14190 33834;33835;33836 23866;23867 23866 2 83324 0 SVLELIPELNEKEEAYNSLMK LLRNSRKQGKASTVKSVLELIPELNEKEEA PELNEKEEAYNSLMKSYVSEKDVTSAKALY K S V M K S 1 0 2 0 0 0 5 0 0 1 4 2 1 0 1 2 0 0 1 1 0 0 21 1 2448.2458 P42704 P42704 1306 1326 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.018385 58.693 By MS/MS 3 0 1 1 712570 712570 0 13359 854 14191 33837 23868;23869 23868 615 2 18602 0 SVLGDVGITEVFSDR LHLPKLSISETYDLKSVLGDVGITEVFSDR SVLGDVGITEVFSDRADLSGITKEQPLKVS K S V D R A 0 1 0 2 0 0 1 2 0 1 1 0 0 1 0 2 1 0 0 3 0 0 15 0 1592.8046 CON__P34955 CON__P34955 323 337 yes yes 2 1.5831E-28 240.6 By MS/MS 6 0 1 1 2376500 2376500 0 + 13360 51 14192 33838 23870 23870 1 18532 0 SVLGGDCLLK MAKGSLVDYLRSRGRSVLGGDCLLKFSLDV RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN R S V L K F 0 0 0 1 1 0 0 2 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1060.5587 P41240 P41240 284 293 CSK Tyrosine-protein kinase CSK yes yes 2 0.024903 88.948 By MS/MS 7 0 1 1 799120 799120 0 13361 839 14193 33839 23871 23871 1 14280 0 SVLHEVMEQQTLSIAK ICCIDEFDKMNESTRSVLHEVMEQQTLSIA VLHEVMEQQTLSIAKAGIICQLNARTSVLA R S V A K A 1 0 0 0 0 2 2 0 1 1 2 1 1 0 0 2 1 0 0 2 0 0 16 0 1811.9451 P33991 P33991 585 600 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.018661 75.968 By MS/MS 4 0 1 1 0 0 0 13362 773 14194 33840 23872 23872 526 1 0 0 SVLQAVQK ALAALSATISFRIYKSVLQAVQKTDEGHPF ISFRIYKSVLQAVQKTDEGHPFKAYLELEI K S V Q K T 1 0 0 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 8 0 871.51272 Q16799 Q16799 643 650 RTN1 Reticulon-1 yes yes 2 0.00094683 173.68 By MS/MS 9 0 1 1 1553700 1553700 0 13363 1549 14195 33841 23873 23873 1 891670 0 SVLRPLDK ______________________________ ______________________________ M S V D K L 0 1 0 1 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 8 1 926.55492 Q9NSP4 Q9NSP4 2 9 CENPM Centromere protein M yes yes 2 0.0037404 123.21 By MS/MS 9.5 0.5 1 1 2 373020 373020 0 13364 2627 14196 33842;33843 23874;23875 23874 2 396480 0 SVLSEGHQR RIRIWGTEGDSWICKSVLSEGHQRTVRKVA DSWICKSVLSEGHQRTVRKVAWSPCGNYLA K S V Q R T 0 1 0 0 0 1 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1011.5098 O76071 O76071 54 62 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 2 0.012358 99.136 By MS/MS 8 0 1 1 0 0 0 13365 345 14197 33844 23876 23876 1 0 0 SVLVSAGNVK LSSQSHYDFGLRALKSVLVSAGNVKRERIQ LRALKSVLVSAGNVKRERIQKIKREKEERG K S V V K R 1 0 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 3 0 0 10 0 972.5604 Q14204 Q14204 2095 2104 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00098936 123.35 By MS/MS 2 0.816 1 1 1 3 3110100 3110100 0 13366 1421 14198 33845;33846;33847 23877;23878 23877 2 149680 0 SVMLYAAEMIPK QEDGSLCLVQFPSRKSVMLYAAEMIPKLKT SRKSVMLYAAEMIPKLKTRTQKTGGADQSL K S V P K L 2 0 0 0 0 0 1 0 0 1 1 1 2 0 1 1 0 0 1 1 0 0 12 0 1351.688 P09132 P09132 103 114 SRP19 Signal recognition particle 19 kDa protein yes yes 2 6.7244E-12 208.63 By MS/MS 10 0 1 1 795230 795230 0 13367 512 14199 33848 23879 23879 309;310 1 845250 0 SVNELIYK RIVEPYIAWGYPNLKSVNELIYKRGYGKIN WGYPNLKSVNELIYKRGYGKINKKRIALTD K S V Y K R 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 0 8 0 964.52295 P18124 P18124 149 156 RPL7 60S ribosomal protein L7 yes yes 2 0.0052244 136.27 By MS/MS By matching 8 0 2 1 1 825540 788190 37348 13368 622 14200 33849;33850 23880 23880 1 51997 318620 SVNLLVVK DSRIEDLEEGQQVIRSVNLLVVKVLEKSDQ EGQQVIRSVNLLVVKVLEKSDQTNILSALL R S V V K V 0 0 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 3 0 0 8 0 870.55385 Q14008 Q14008 1667 1674 CKAP5 Cytoskeleton-associated protein 5 yes yes 1;2 0.0026772 136.11 By MS/MS 2.33 0.471 2 1 3 1147400 1147400 0 13369 1405 14201 33851;33852;33853 23881;23882;23883 23882 3 54904 0 SVPAFIDISEEDQAAELR ______________________________ AFIDISEEDQAAELRAYLKSKGAEISEENS M S V L R A 3 1 0 2 0 1 3 0 0 2 1 0 0 1 1 2 0 0 0 1 0 0 18 0 1988.9691 Q7L2H7 Q7L2H7 2 19 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.0011128 121.31 By MS/MS 7.83 1.34 1 2 1 1 1 6 3100900 3100900 0 13370 1764 14202 33854;33855;33856;33857;33858;33859 23884;23885;23886;23887;23888;23889 23885 6 200550 0 SVPDEIILLR LNSILVLDLRDNKLKSVPDEIILLRSLERL DNKLKSVPDEIILLRSLERLDLSNNDISSL K S V L R S 0 1 0 1 0 0 1 0 0 2 2 0 0 0 1 1 0 0 0 1 0 0 10 0 1153.6707 Q9H9A6 Q9H9A6 303 312 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.00097581 123.98 By MS/MS 5 0 1 1 1365200 1365200 0 13371 2532 14203 33860 23890 23890 1 56116 0 SVPLATAPMAEQR QQYTLEPSEKPFDLKSVPLATAPMAEQRTE LKSVPLATAPMAEQRTESTPITAVKQPEKV K S V Q R T 3 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 13 0 1369.7024 Q9Y678 Q9Y678 578 590 COPG1 Coatomer subunit gamma-1 yes yes 2 6.8174E-06 137.89 By MS/MS 4 0 2 2 0 0 0 13372 2996 14204;14205 33861;33862 23891;23892 23892 1725 2 0 0 SVQATTENKELK ASWNMSMLQTQDLVKSVQATTENKELKTVT LVKSVQATTENKELKTVTFSKL________ K S V L K T 1 0 1 0 0 1 2 0 0 0 1 2 0 0 0 1 2 0 0 1 0 0 12 1 1346.7042 Q13011 Q13011 310 321 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 2 0.00086008 156.58 By MS/MS 8 0 1 1 2753900 2753900 0 13373 1324 14206 33863 23893 23893 1 181670 0 SVQQTVELLTR MGVTCVSQMPVAEGKSVQQTVELLTRKLEM AEGKSVQQTVELLTRKLEMLGAEKQGTFCV K S V T R K 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 1 2 0 0 2 0 0 11 0 1272.7038 Q9H944 Q9H944 16 26 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 2 5.3548E-22 238.51 By MS/MS 9 0 1 1 602240 602240 0 13374 2529 14207 33864 23894 23894 1 345630 0 SVQTTLQTDEVK GPGFHLMLPFITSYKSVQTTLQTDEVKNVP SYKSVQTTLQTDEVKNVPCGTSGGVMIYFD K S V V K N 0 0 0 1 0 2 1 0 0 0 1 1 0 0 0 1 3 0 0 2 0 0 12 0 1347.6882 O75477;O94905 O94905 61 72 ERLIN1;ERLIN2 Erlin-1;Erlin-2 no no 2 1.878E-17 262.07 By MS/MS 7.5 0.5 1 1 2 9147400 9147400 0 13375 357;312 14208 33865;33866 23895 23895 1 175670 0 SVSHGSNHTQKPDEQR EERISAVESQPSRKRSVSHGSNHTQKPDEQ VSHGSNHTQKPDEQRSEPSAGIPKVTSRCI R S V Q R S 0 1 1 1 0 2 1 1 2 0 0 1 0 0 1 3 1 0 0 1 0 0 16 1 1805.8405 Q9Y520 Q9Y520 924 939 PRRC2C Protein PRRC2C yes yes 3 0.03318 61.265 By MS/MS 1.5 0.5 1 1 2 219840 219840 0 13376 2963 14209 33867;33868 23896 23896 1 10768 0 SVSSNVASVSPIPAGSK ASPRVPGGSPRTPNRSVSSNVASVSPIPAG SSNVASVSPIPAGSKKIDPNMKAGATSEGV R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 Q9Y6G9 Q9Y6G9 412 428 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 2 1.1299E-33 247.11 By MS/MS 7 0.816 1 1 1 3 6229000 6229000 0 13377 3005 14210 33869;33870;33871 23897 23897 1 65430 0 SVSSSLSDAR VQAAICLLANMAVDRSVSSSLSDARDALVN MAVDRSVSSSLSDARDALVNAVVDSLSAYG R S V A R D 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 5 0 0 0 1 0 0 10 0 1007.4884 O95487 O95487 1030 1039 SEC24B Protein transport protein Sec24B yes yes 2 0.018122 93.667 By MS/MS 3 0 1 1 411810 411810 0 13378 396 14211 33872 23898 23898 1 10750 0 SVSTPSEAGSQDSGDGAVGSR FSEYWVPPPMSPSSKSVSTPSEAGSQDSGD EAGSQDSGDGAVGSRTLHWDTDPSVLQLHS K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 Q13409 Q13409 92 112 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 2 8.4941E-41 249.54 By MS/MS 5 0 1 1 1792300 1792300 0 13379 1365 14212 33873 23899 23899 1 73671 0 SVTCTYSPALNK SYGFRLGFLHSGTAKSVTCTYSPALNKMFC TAKSVTCTYSPALNKMFCQLAKTCPVQLWV K S V N K M 1 0 1 0 1 0 0 0 0 0 1 1 0 0 1 2 2 0 1 1 0 0 12 0 1339.6442 P04637 P04637 121 132 TP53 Cellular tumor antigen p53 yes yes 2 4.0019E-07 183.72 By MS/MS 6.5 0.5 1 1 2 5614800 5614800 0 13380 455 14213 33874;33875 23900 23900 1 46794 0 SVTEQGAELSNEER AEQAERYDDMAACMKSVTEQGAELSNEERN KSVTEQGAELSNEERNLLSVAYKNVVGARR K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 P63104 P63104 28 41 YWHAZ 14-3-3 protein zeta/delta yes yes 2 7.0721E-73 309.35 By MS/MS By matching 8 0 2 1 1 16582000 16489000 93211 13381 1169 14214 33876;33877 23901 23901 1 1087800 795200 SVTLESKK QCGAAEEEFVQRFRRSVTLESKKQLIEPVQ FVQRFRRSVTLESKKQLIEPVQYDEQGMAF R S V K K Q 0 0 0 0 0 0 1 0 0 0 1 2 0 0 0 2 1 0 0 1 0 0 8 1 890.5073 P82933 P82933 247 254 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 2 0.0096654 153.71 By MS/MS By matching 7.33 0.471 2 1 2 1 6217900 6185500 32343 13382 1211 14215 33878;33879;33880 23902 23902 1 123760 132780 SVTLLIK GEEKFTFIEKCNNPRSVTLLIKGPNKHTLT IEKCNNPRSVTLLIKGPNKHTLTQIKDAVR R S V I K G 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 7 0 772.50584 P40227 P40227 371 377 CCT6A T-complex protein 1 subunit zeta yes yes 2 0.0099715 154.09 By MS/MS By matching 6.5 2.6 1 1 2 1 1 1 1 7 1 37664000 37627000 36871 13383 828 14216 33881;33882;33883;33884;33885;33886;33887;33888 23903;23904;23905;23906;23907;23908 23905 6 1744100 113080 SVVADTDQK EEITESSSTEEMEVRSVVADTDQKALGSEV EEMEVRSVVADTDQKALGSEVQDASKVTTQ R S V Q K A 1 0 0 2 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 9 0 961.47164 Q9H2G2 Q9H2G2 655 663 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.00040063 155.58 By MS/MS 2 0 1 1 611810 611810 0 13384 2476 14217 33889 23909 23909 1 30410 0 SVVALHNLINNK TNDQMVVVYLASLIRSVVALHNLINNKIAN LIRSVVALHNLINNKIANRDAEKKEGQEKE R S V N K I 1 0 3 0 0 0 0 0 1 1 2 1 0 0 0 1 0 0 0 2 0 0 12 0 1320.7514 P51665 P51665 268 279 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 2 2.253E-07 188.91 By MS/MS 7 0 1 1 2404200 2404200 0 13385 975 14218 33890 23910 23910 1 42963 0 SVVCQESDLPDELLYGR CESQECVTKLLQLQRSVVCQESDLPDELLY VCQESDLPDELLYGRAGYLYALLYLNTEIG R S V G R A 0 1 0 2 1 1 2 1 0 0 3 0 0 0 1 2 0 0 1 2 0 0 17 0 1978.9306 Q9NS86 Q9NS86 184 200 LANCL2 LanC-like protein 2 yes yes 2 0.00017966 132.31 By MS/MS 7 0 1 1 291980 291980 0 13386 2621 14219 33891 23911 23911 1 5217.7 0 SVVGTPAYLAPEVLR DFGFARIIGEKSFRRSVVGTPAYLAPEVLR SVVGTPAYLAPEVLRSKGYNRSLDMWSVGV R S V L R S 2 1 0 0 0 0 1 1 0 0 2 0 0 0 2 1 1 0 1 3 0 0 15 0 1570.8719 O94806 O94806 735 749 PRKD3 Serine/threonine-protein kinase D3 no no 2 3.9069E-07 164.04 By MS/MS 4.5 0.5 1 1 2 887210 887210 0 13387 351 14220 33892;33893 23912 23912 1 25504 0 SVVLQLADGQIFK VDGVIISLCCNSKTKSVVLQLADGQIFKYL TKSVVLQLADGQIFKYLWESPSLAIKPWKN K S V F K Y 1 0 0 1 0 2 0 1 0 1 2 1 0 1 0 1 0 0 0 2 0 0 13 0 1416.7977 O95163 O95163 568 580 IKBKAP Elongator complex protein 1 yes yes 2 1.8469E-07 209.8 By MS/MS 3 0 1 1 510260 510260 0 13388 368 14221 33894 23913 23913 1 13320 0 SVVSLKNEEENENSISQYK KEELLGTKEIEEYKKSVVSLKNEEENENSI LKNEEENENSISQYKESVKRLLNVT_____ K S V Y K E 0 0 3 0 0 1 4 0 0 1 1 2 0 0 0 4 0 0 1 2 0 0 19 1 2196.0546 P82673 P82673 295 313 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 2;3 1.3953E-10 209.56 By MS/MS 7.33 0.471 2 1 3 5393700 5393700 0 13389 1204 14222 33895;33896;33897 23914;23915 23915 2 117320 0 SVVTSIFGVK ENPKGDNRLDLLKLKSVVTSIFGVKNTELA LLKLKSVVTSIFGVKNTELAVFHDETEIQN K S V V K N 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 2 1 0 0 3 0 0 10 0 1035.5964 P41252 P41252 1116 1125 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0046607 112.11 By MS/MS 3 0 1 1 0 0 0 13390 840 14223 33898 23916 23916 1 0 0 SWCPDCVQAEPVVR TIFAYFTGSKDAGGKSWCPDCVQAEPVVRE KSWCPDCVQAEPVVREGLKHISEGCVFIYC K S W V R E 1 1 0 1 2 1 1 0 0 0 0 0 0 0 2 1 0 1 0 3 0 0 14 0 1701.7603 Q9BRA2 Q9BRA2 41 54 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 2 0.0055316 101.72 By MS/MS 10 0 1 1 186800 186800 0 13391 2321 14224 33899 23917 23917 1 198550 0 SWCQEELSVAVK HVTLRLLKPECVLDKSWCQEELSVAVKRAV LDKSWCQEELSVAVKRAVMLLHTHTITSRV K S W V K R 1 0 0 0 1 1 2 0 0 0 1 1 0 0 0 2 0 1 0 2 0 0 12 0 1434.6813 Q92616 Q92616 937 948 GCN1L1 Translational activator GCN1 yes yes 2 5.1424E-12 213.35 By MS/MS 3 0.816 1 1 1 3 508640 508640 0 13392 2068 14225 33900;33901;33902 23918 23918 1 18146 0 SWEEQMIEVGR QHAKEDETRYHNEMKSWEEQMIEVGRKDLL NEMKSWEEQMIEVGRKDLLRRTIKKQRKYG K S W G R K 0 1 0 0 0 1 3 1 0 1 0 0 1 0 0 1 0 1 0 1 0 0 11 0 1362.6238 Q00059 Q00059 217 227 TFAM Transcription factor A, mitochondrial yes yes 2 7.1434E-11 206.49 By MS/MS 9 0 2 2 667130 667130 0 13393 1229 14226;14227 33903;33904 23919;23920 23920 1000 2 382870 0 SWFEGQGLAGK AERENFHRLCENYIKSWFEGQGLAGKLRAI NYIKSWFEGQGLAGKLRAIQTVSCLLQGPC K S W G K L 1 0 0 0 0 1 1 3 0 0 1 1 0 1 0 1 0 1 0 0 0 0 11 0 1178.572 Q9H3U1 Q9H3U1 401 411 UNC45A Protein unc-45 homolog A yes yes 2 2.3538E-07 191.45 By MS/MS 4.5 0.5 1 1 2 2677200 2677200 0 13394 2493 14228 33905;33906 23921 23921 1 76516 0 SWLEQDTSCPTCR RKLPCGHLFHNSCLRSWLEQDTSCPTCRMS LRSWLEQDTSCPTCRMSLNIADNNRVREEH R S W C R M 0 1 0 1 2 1 1 0 0 0 1 0 0 0 1 2 2 1 0 0 0 0 13 0 1638.6766 Q9UKV5 Q9UKV5 367 379 AMFR E3 ubiquitin-protein ligase AMFR yes yes 2 1.9384E-05 138.63 By MS/MS 1 0 1 1 179330 179330 0 13395 2817 14229 33907 23922 23922 0 8761.6 0 SWLFGINK ______________________________ ______________________________ M S W N K G 0 0 1 0 0 0 0 1 0 1 1 1 0 1 0 1 0 1 0 0 0 0 8 0 963.5178 Q9NVI7 Q9NVI7 2 9 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.0018661 137.18 By MS/MS 5.5 0.5 1 1 2 2748700 2748700 0 13396 2655 14230 33908;33909 23923;23924 23924 2 36653 0 SWLFGINKGPK ______________________________ ______________________________ M S W P K G 0 0 1 0 0 0 0 2 0 1 1 2 0 1 1 1 0 1 0 0 0 0 11 1 1245.687 Q9NVI7 Q9NVI7 2 12 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2 0.001758 138.66 By MS/MS 5.5 0.5 1 1 2 1551000 1551000 0 13397 2655 14231 33910;33911 23925;23926 23926 2 16928 0 SWLFGVNK ______________________________ ______________________________ M S W N K G 0 0 1 0 0 0 0 1 0 0 1 1 0 1 0 1 0 1 0 1 0 0 8 0 949.50215 Q5T9A4 Q5T9A4 2 9 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.050805 79.451 By MS/MS 5 0 1 1 494070 494070 0 13398 1634 14232 33912 23927 23927 1 20308 0 SWLFGVNKGPK ______________________________ ______________________________ M S W P K G 0 0 1 0 0 0 0 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 11 1 1231.6713 Q5T9A4 Q5T9A4 2 12 ATAD3B ATPase family AAA domain-containing protein 3B yes yes 2 0.018123 101.65 By MS/MS 5 0 1 1 177550 177550 0 13399 1634 14233 33913 23928 23928 1 7298 0 SWLNSDSLK IFYIVTLNNTADHLRSWLNSDSLKSIRYKI TADHLRSWLNSDSLKSIRYKIVNFDPKLLE R S W L K S 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 3 0 1 0 0 0 0 9 0 1048.5189 Q68CQ7 Q68CQ7 111 119 GLT8D1 Glycosyltransferase 8 domain-containing protein 1 yes yes 2 0.0037286 118.5 By MS/MS 7 0 1 1 700680 700680 0 13400 1671 14234 33914 23929 23929 1 12521 0 SWLPQNCTLVDMK IMSHATQAIFEILEKSWLPQNCTLVDMKIE EKSWLPQNCTLVDMKIEFGVDVTTKEIVLA K S W M K I 0 0 1 1 1 1 0 0 0 0 2 1 1 0 1 1 1 1 0 1 0 0 13 0 1590.7534 P22234 P22234 179 191 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2 0.0025571 110.31 By MS/MS 7 0 1 1 1599400 1599400 0 13401 656 14235 33915 23930 23930 441 1 28582 0 SWNETLTSR EIIPQNQKAIASSLKSWNETLTSRLAALPE IASSLKSWNETLTSRLAALPENPPAIDWAY K S W S R L 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 2 1 0 0 0 0 9 0 1092.52 O75947 O75947 33 41 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 8.1529E-07 192.91 By MS/MS 8.5 0.5 1 1 2 8941400 8941400 0 13402 340 14236 33916;33917 23931 23931 1 4756500 0 SWTAADTAAQITQR AYDGKDYIALNEDLRSWTAADTAAQITQRK RSWTAADTAAQITQRKLEAARAAEQLRAYL R S W Q R K 4 1 0 1 0 2 0 0 0 1 0 0 0 0 0 1 3 1 0 0 0 0 14 0 1518.7427 P01889;P10321 P10321 156 169 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain no no 2 8.5649E-47 285.83 By MS/MS 7 0 1 1 9180200 9180200 0 13403 536;436 14237 33918 23932 23932 1 164050 0 SYAEELAK GEWAVVTGSTDGIGKSYAEELAKHGMKVVL STDGIGKSYAEELAKHGMKVVLISRSKDKL K S Y A K H 2 0 0 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 8 0 909.44436 Q53GQ0 Q53GQ0 65 72 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.0069891 129.68 By MS/MS By matching 8 0 2 1 1 33807000 33743000 64147 13404 1584 14238 33919;33920 23933 23933 1 2226000 547260 SYDLSDITQADLSR LSNRRLKHFPRGAARSYDLSDITQADLSRN RSYDLSDITQADLSRNRFPEVPEAACQLVS R S Y S R N 1 1 0 3 0 1 0 0 0 1 2 0 0 0 0 3 1 0 1 0 0 0 14 0 1582.7475 O75427 O75427 64 77 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 5.4761E-35 255.41 By MS/MS 5 0 1 1 1262200 1262200 0 13405 308 14239 33921 23934 23934 1 51882 0 SYDSLPNFTAADCLR SYYTGIMEDIMNSEKSYDSLPNFTAADCLR SYDSLPNFTAADCLRLLGIGRNQYIDLMNQ K S Y L R L 2 1 1 2 1 0 0 0 0 0 2 0 0 1 1 2 1 0 1 0 0 0 15 0 1728.7777 Q658Y4 Q658Y4 111 125 FAM91A1 Protein FAM91A1 yes yes 2 3.4067E-14 198.74 By MS/MS 4 0 1 1 1098700 1098700 0 13406 1668 14240 33922 23935 23935 1 29992 0 SYEAYVLNIVR QIQKTEISFRPNDPKSYEAYVLNIVRFLEK NDPKSYEAYVLNIVRFLEKYKDSAQRDDMI K S Y V R F 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 2 2 0 0 11 0 1325.698 P05026 P05026 97 107 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 2 5.5508E-07 185.81 By MS/MS 6 0 1 1 3176500 3176500 0 13407 464 14241 33923 23936 23936 1 24770 0 SYEECIIESR DDGVPCVFPFIFNGKSYEECIIESRAKLWC IFNGKSYEECIIESRAKLWCSTTADYDRDH K S Y S R A 0 1 0 0 1 0 3 0 0 2 0 0 0 0 0 2 0 0 1 0 0 0 10 0 1284.5656 P11717 P11717 1913 1922 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.00069522 136.99 By MS/MS 2 0.816 1 1 1 3 785480 785480 0 13408 557 14242 33924;33925;33926 23937 23937 1 33553 0 SYEEHLEK RSLEARIIALSVKIRSYEEHLEKHRKDKAH ALSVKIRSYEEHLEKHRKDKAHKRYLLMSI R S Y E K H 0 0 0 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 8 0 1033.4716 P82914 P82914 138 145 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2;3 0.0016587 162.25 By MS/MS 9 0 2 2 2104600 2104600 0 13409 1207 14243 33927;33928 23938;23939 23938 2 1207800 0 SYEGEEDTPMGLLLGGVK CRLVKYDEFHDYLERSYEGEEDTPMGLLLG GEEDTPMGLLLGGVKSTYMFDLLLETRKPD R S Y V K S 0 0 0 1 0 0 3 4 0 0 3 1 1 0 1 1 1 0 1 1 0 0 18 0 1893.903 Q96K76 Q96K76 671 688 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 0.0045069 120.55 By MS/MS 3.5 0.5 1 1 2 124170 124170 0 13410 2216 14244 33929;33930 23940;23941 23940 2 3290.6 0 SYEIASLVR FEIEYQGDPELQPIRSYEIASLVRTLFRLS ELQPIRSYEIASLVRTLFRLSSAINHRFAG R S Y V R T 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 9 0 1036.5553 Q9NXE4 Q9NXE4 737 745 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 0.0028304 120.87 By MS/MS By matching 4.5 0.5 1 1 1 1 830660 661450 169210 13411 2686 14245 33931;33932 23942 23942 1 27188 353570 SYELPDGQVITIGNER EQEMATAASSSSLEKSYELPDGQVITIGNE YELPDGQVITIGNERFRCPEALFQPSFLGM K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P60709;P63267;P68133;P68032;P62736;Q6S8J3;A5A3E0;Q9BYX7;P63261;Q562R1 P60709 239 254 ACTB;ACTG2;ACTA1;ACTC1;ACTA2;POTEE;POTEF;POTEKP;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 2;3 1.0739E-14 203.74 By MS/MS By MS/MS 7.64 1.15 1 6 1 2 1 8 3 44155000 43710000 444770 13412 1072;1179;1593 14246 33933;33934;33935;33936;33937;33938;33939;33940;33941;33942;33943 23943;23944;23945;23946;23947;23948;23949;23950;23951;23952 23945 10 1041800 2841600 SYENELDPLKNR TSKEAQLTSSKEIVKSYENELDPLKNRLKE IVKSYENELDPLKNRLKEIEHNLSKIMKLD K S Y N R L 0 1 2 1 0 0 2 0 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 1 1476.7209 Q92878 Q92878 243 254 RAD50 DNA repair protein RAD50 yes yes 2 0.036574 106.4 By MS/MS 3 0 1 1 368950 368950 0 13413 2083 14247 33944 23953 23953 1 9631.4 0 SYESLFIR SLPGAEDYIKDLETKSYESLFIRAVRAYNG IKDLETKSYESLFIRAVRAYNGENWRTSIT K S Y I R A 0 1 0 0 0 0 1 0 0 1 1 0 0 1 0 2 0 0 1 0 0 0 8 0 1013.5182 O75718 O75718 205 212 CRTAP Cartilage-associated protein yes yes 2 0.00055232 182.13 By MS/MS 7.5 0.5 1 1 2 1268000 1268000 0 13414 326 14248 33945;33946 23954 23954 1 25528 0 SYESQIEVMAAEVAK TSYKQQLEAVNEAIKSYESQIEVMAAEVAK SYESQIEVMAAEVAKNKESVNKAQEEVTKQ K S Y A K N 3 0 0 0 0 1 3 0 0 1 0 1 1 0 0 2 0 0 1 2 0 0 15 0 1653.792 O95347 O95347 849 863 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 1.2537E-06 131.32 By MS/MS 3 0 1 1 215980 215980 0 13415 385 14249 33947 23955 23955 204 0 5638.2 0 SYEVTVENFLR MELNVYGDDVEVDYRSYEVTVENFLRVLTG VDYRSYEVTVENFLRVLTGRIPPSTPRSKR R S Y L R V 0 1 1 0 0 0 2 0 0 0 1 0 0 1 0 1 1 0 1 2 0 0 11 0 1355.6721 Q92643 Q92643 123 133 PIGK GPI-anchor transamidase yes yes 2 5.0001E-07 186.78 By MS/MS 8 0.816 1 1 1 3 995160 995160 0 13416 2072 14250 33948;33949;33950 23956 23956 1 46263 0 SYGATATSPGER SYLTWGVLQERVMTRSYGATATSPGERFTD MTRSYGATATSPGERFTDSQFLVLMNRVLA R S Y E R F 2 1 0 0 0 0 1 2 0 0 0 0 0 0 1 2 2 0 1 0 0 0 12 0 1195.5469 Q8TB61 Q8TB61 137 148 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 3.3643E-05 169.58 By MS/MS 1.5 0.5 1 1 2 594940 594940 0 13417 1988 14251 33951;33952 23957 23957 1 29205 0 SYGEDGTAAK QKIISAISELLERLKSYGEDGTAAKHLFFS LERLKSYGEDGTAAKHLFFSQSCSLLVRLV K S Y A K H 2 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 1 0 1 0 0 0 10 0 997.43525 Q9NU22 Q9NU22 4587 4596 MDN1 Midasin yes yes 2 0.018824 93.178 By MS/MS 1 0 1 1 57328 57328 0 13418 2635 14252 33953 23958 23958 1 2801 0 SYIFEGALGMSNR ALMITVPIGLYFTTKSYIFEGALGMSNRDS TKSYIFEGALGMSNRDSYFYAAIVAVVAVH K S Y N R D 1 1 1 0 0 0 1 2 0 1 1 0 1 1 0 2 0 0 1 0 0 0 13 0 1443.6816 Q3ZAQ7 Q3ZAQ7 50 62 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 yes yes 2 1.8066E-25 240.37 By MS/MS 10 0 1 1 299620 299620 0 13419 1571 14253 33954 23959 23959 1180 1 318460 0 SYLAQFAAR LDQCPKLEVDIPLVKSYLAQFAARAIISEL DIPLVKSYLAQFAARAIISELVSISELAQP K S Y A R A 3 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 9 0 1025.5294 P78344 P78344 641 649 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.00029272 158.07 By MS/MS 4.5 0.5 1 1 2 3805900 3805900 0 13420 1192 14254 33955;33956 23960 23960 1 109190 0 SYLEFSEDSVQVPR FRIYGETPEACRQARSYLEFSEDSVQVPRN RSYLEFSEDSVQVPRNLVGKVIGKNGKVIQ R S Y P R N 0 1 0 1 0 1 2 0 0 0 1 0 0 1 1 3 0 0 1 2 0 0 14 0 1654.7839 P51116 P51116 287 300 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2 1.7183E-25 234.39 By MS/MS 4 0 1 1 520170 520170 0 13421 958 14255 33957 23961 23961 1 14200 0 SYLENPAFMLLDLK VIDGATMSRFSNLWKSYLENPAFMLLDLK_ KSYLENPAFMLLDLK_______________ K S Y L K - 1 0 1 1 0 0 1 0 0 0 4 1 1 1 1 1 0 0 1 0 0 0 14 0 1652.8484 P11182 P11182 469 482 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 2 3.6011E-35 260.7 By MS/MS 6 0 2 2 2241500 2241500 0 13422 550 14256;14257 33958;33959 23962;23963 23963 346 2 17480 0 SYLTEQVNQDLPK SLPKDFWEQEVRDIRSYLTEQVNQDLPKEV IRSYLTEQVNQDLPKEVLAELEALERRVHK R S Y P K E 0 0 1 1 0 2 1 0 0 0 2 1 0 0 1 1 1 0 1 1 0 0 13 0 1533.7675 Q16822 Q16822 612 624 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 1.5393E-11 196.27 By MS/MS 5 0 1 1 610690 610690 0 13423 1550 14258 33960 23964 23964 1 25102 0 SYNDELQFLEK ______________________________ ______________________________ R S Y E K I 0 0 1 1 0 1 2 0 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1384.6511 Q9Y3I0 Q9Y3I0 4 14 RTCB tRNA-splicing ligase RtcB homolog yes yes 2 1.1844E-29 265.77 By MS/MS 8 1.41 1 1 1 1 1 5 8257800 8257800 0 13424 2938 14259 33961;33962;33963;33964;33965 23965;23966 23965 2 237360 0 SYNKDLESAEER DIHNMSVKAMRFPPKSYNKDLESAEERRER PPKSYNKDLESAEERREREQQDLEFAKEMA K S Y E R R 1 1 1 1 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 12 1 1439.6529 O43242 O43242 500 511 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 1.3798E-15 218.55 By MS/MS 6 0 1 1 2781800 2781800 0 13425 187 14260 33966 23967 23967 1 21692 0 SYNRFQIATVTEK LVERCMRVLYYRDARSYNRFQIATVTEKGV ARSYNRFQIATVTEKGVEIEGPLSTETNWD R S Y E K G 1 1 1 0 0 1 1 0 0 1 0 1 0 1 0 1 2 0 1 1 0 0 13 1 1555.7995 P28070 P28070 228 240 PSMB4 Proteasome subunit beta type-4 yes yes 2;3 0.00049676 157.03 By MS/MS 8.67 0.471 1 2 3 3079200 3079200 0 13426 713 14261 33967;33968;33969 23968;23969 23968 2 1690200 0 SYPGSQLDILIDQGK DQSKWKAYDATHLVKSYPGSQLDILIDQGK SYPGSQLDILIDQGKDDQFLLDGQLLPDNF K S Y G K D 0 0 0 2 0 2 0 2 0 2 2 1 0 0 1 2 0 0 1 0 0 0 15 0 1632.8359 P10768 P10768 210 224 ESD S-formylglutathione hydrolase yes yes 2 1.4566E-05 143.56 By MS/MS 9 0.816 1 1 1 3 1379000 1379000 0 13427 543 14262 33970;33971;33972 23970;23971 23970 2 187360 0 SYQDFFEAIR RNSGSELQVYYASPRSYQDFFEAIRRRGDT YASPRSYQDFFEAIRRRGDTFYVVSFRRDH R S Y I R R 1 1 0 1 0 1 1 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 10 0 1274.5932 P18850 P18850 551 560 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 2 0.0007548 134.23 By MS/MS 4.5 0.5 1 1 2 292400 292400 0 13428 626 14263 33973;33974 23972 23972 1 8229.6 0 SYQGELK FKLEVGRFGQLTYVRSYQGELKKGDTIYNT FGQLTYVRSYQGELKKGDTIYNTRTRKKVR R S Y L K K 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 7 0 823.40758 Q96RP9 Q96RP9 373 379 GFM1 Elongation factor G, mitochondrial yes yes 2 0.049323 101.6 By MS/MS 5 0.816 1 1 1 3 4093300 4093300 0 13429 2247 14264 33975;33976;33977 23973;23974 23973 2 128970 0 SYQYLVESIR QVIPVLGEVIAGDWKSYQYLVESIRRFPSQ AGDWKSYQYLVESIRRFPSQEEFKDMIEDA K S Y I R R 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 2 0 0 2 1 0 0 10 0 1256.6401 Q5HYK3 Q5HYK3 280 289 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.00029175 153.12 By MS/MS 8 0 1 1 655170 655170 0 13430 1602 14265 33978 23975;23976 23975 2 43221 0 SYRDQTIVDPFSSK ______________________________ RSYRDQTIVDPFSSKHNVIVGRNGSGKSNF R S Y S K H 0 1 0 2 0 1 0 0 0 1 0 1 0 1 1 3 1 0 1 1 0 0 14 1 1641.7999 Q9UQE7 Q9UQE7 13 26 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 5.1913E-07 181.76 By MS/MS 3 0 1 1 1746200 1746200 0 13431 2860 14266 33979 23977 23977 1 45585 0 SYSEDDIHR DFDWNLKHGRVFIIKSYSEDDIHRSIKYNI RVFIIKSYSEDDIHRSIKYNIWCSTEHGNK K S Y H R S 0 1 0 2 0 0 1 0 1 1 0 0 0 0 0 2 0 0 1 0 0 0 9 0 1120.4785 Q7Z739;Q9BYJ9;Q9Y5A9 Q9Y5A9 417 425 YTHDF3;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 2;3 0.034577 90.709 By MS/MS 5.33 0.471 2 1 3 3053000 3053000 0 13432 2966;1804 14267 33980;33981;33982 23978;23979 23979 2 103110 0 SYSGENTASAIAR HYQPRGQLLSWFYYKSYSGENTASAIARSA YKSYSGENTASAIARSAAATALSLLVPVFI K S Y A R S 3 1 1 0 0 0 1 1 0 1 0 0 0 0 0 3 1 0 1 0 0 0 13 0 1325.6212 Q5VW36 Q5VW36 1028 1040 FOCAD Focadhesin yes yes 2 2.4098E-25 241.39 By MS/MS 3.5 0.5 1 1 2 861210 861210 0 13433 1654 14268 33983;33984 23980 23980 1 22678 0 SYSPTLFAQTVR GDEENFCATVPKDGRSYSPTLFAQTVRVLK DGRSYSPTLFAQTVRVLKKINKPGNMIMAF R S Y V R V 1 1 0 0 0 1 0 0 0 0 1 0 0 1 1 2 2 0 1 1 0 0 12 0 1368.7038 Q14139 Q14139 938 949 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 2.0266E-07 189.58 By MS/MS 3.5 0.5 1 1 2 2236600 2236600 0 13434 1408 14269 33985;33986 23981;23982 23981 2 59549 0 SYSQSSNLFR IHTGEKPYECVQCGKSYSQSSNLFRHQRRH VQCGKSYSQSSNLFRHQRRHNAEKLLNVVK K S Y F R H 0 1 1 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 0 10 0 1187.5571 P17028 P17028 343 352 ZNF24 Zinc finger protein 24 yes yes 2 0.00055075 142.98 By MS/MS 7 0 1 1 1203200 1203200 0 13435 610 14270 33987 23983 23983 1 21501 0 SYSSGGEDGYVR HFGPINSVAFHPDGKSYSSGGEDGYVRIHY DGKSYSSGGEDGYVRIHYFDPQYFEFEFEA K S Y V R I 0 1 0 1 0 0 1 3 0 0 0 0 0 0 0 3 0 0 2 1 0 0 12 0 1275.5368 Q13347 Q13347 299 310 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 2 1.1903E-16 223.87 By MS/MS By MS/MS 7.9 0.943 4 4 1 1 7 3 32922000 32560000 361370 13436 1358 14271 33988;33989;33990;33991;33992;33993;33994;33995;33996;33997 23984;23985;23986;23987;23988;23989;23990;23991 23987 8 1769200 2608900 SYSTTYEER ARNIFPSNLVSAAFRSYSTTYEERNITGTR VSAAFRSYSTTYEERNITGTRVKVPVGQEV R S Y E R N 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 2 2 0 2 0 0 0 9 0 1134.4829 Q15758 Q15758 203 211 SLC1A5 Neutral amino acid transporter B(0) yes yes 2 0.00154 134.77 By MS/MS 5 0 1 1 545930 545930 0 13437 1518 14272 33998 23992 23992 1 22440 0 SYTCKPLER LCAYMAAFNSINGNRSYTCKPLERSLLMAG SINGNRSYTCKPLERSLLMAGAVASSTFLG R S Y E R S 0 1 0 0 1 0 1 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 9 1 1152.5597 Q6P4A7 Q6P4A7 156 164 SFXN4 Sideroflexin-4 yes yes 2 0.010346 136.27 By MS/MS 8 0 1 1 1313200 1313200 0 13438 1709 14273 33999 23993 23993 1 86633 0 SYTLTTGMDLVVK ALAQIFRSDGAHFQKSYTLTTGMDLVVKTV QKSYTLTTGMDLVVKTVPVPDTGDSVELFI K S Y V K T 0 0 0 1 0 0 0 1 0 0 2 1 1 0 0 1 3 0 1 2 0 0 13 0 1426.7378 Q9BW83 Q9BW83 35 47 IFT27 Intraflagellar transport protein 27 homolog yes yes 2 0.00075983 130.01 By MS/MS 9.5 0.5 1 1 2 339510 339510 0 13439 2390 14274 34000;34001 23994 23994 1478 1 288040 0 SYVLVESVCK GGNRSSSREQELALRSYVLVESVCKSLQTL ELALRSYVLVESVCKSLQTLAMAVASQNAV R S Y C K S 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 0 0 1 3 0 0 10 0 1182.5955 Q9NU22 Q9NU22 301 310 MDN1 Midasin yes yes 2 1.1073E-06 181.55 By MS/MS 1.5 0.5 1 1 2 378460 378460 0 13440 2635 14275 34002;34003 23995 23995 1 18581 0 SYVSEKDVTSAK PELNEKEEAYNSLMKSYVSEKDVTSAKALY LMKSYVSEKDVTSAKALYEHLTAKNTKLDD K S Y A K A 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 3 1 0 1 2 0 0 12 1 1312.6511 P42704 P42704 1327 1338 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 7.5092E-23 234.9 By MS/MS By matching 4.07 1.87 1 1 5 2 2 1 1 1 13 1 73823000 73646000 176970 13441 854 14276 34004;34005;34006;34007;34008;34009;34010;34011;34012;34013;34014;34015;34016;34017 23996;23997;23998;23999;24000 23996 5 1947100 253630 SYWLDNFAK IPYAGIDLAVYELLKSYWLDNFAKDSVNPG VYELLKSYWLDNFAKDSVNPGVMVLLGCGA K S Y A K D 1 0 1 1 0 0 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 0 9 0 1142.5397 Q6NUK1 Q6NUK1 370 378 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.0012441 141.52 By MS/MS 7.5 0.5 1 1 2 4998400 4998400 0 13442 1690 14277 34018;34019 24001 24001 1 93142 0 TAAAAAEHSQR EAATGGGSTGEADGKTAAAAAEHSQRELDT ADGKTAAAAAEHSQRELDTVTLEDIKEHVK K T A Q R E 5 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 11 0 1111.537 O43242 O43242 55 65 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 9.0828E-11 204.34 By MS/MS By MS/MS 5 2.39 1 1 1 2 1 1 6 1 5999800 5965400 34348 13443 187 14278 34020;34021;34022;34023;34024;34025;34026 24002;24003;24004;24005 24003 4 67295 105340 TAAALAPASLTSAR RSAHATAPVNIAGSRTAAALAPASLTSARM RTAAALAPASLTSARMAPALSGANLTSPRV R T A A R M 6 1 0 0 0 0 0 0 0 0 2 0 0 0 1 2 2 0 0 0 0 0 14 0 1299.7147 Q9UQ35 Q9UQ35 2357 2370 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00013796 143.24 By MS/MS 1.5 0.5 1 1 2 310470 310470 0 13444 2858 14279 34027;34028 24006 24006 1 15270 0 TAAANAAAGAAENAFR QQEFAAGVFSNPAVRTAAANAAAGAAENAF AAANAAAGAAENAFRAP_____________ R T A F R A 9 1 2 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 16 0 1475.7117 O14828 O14828 330 345 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 6.357E-50 271.04 By MS/MS By MS/MS 7.5 2.6 1 1 3 2 1 7 1 10871000 10816000 54780 13445 130 14280 34029;34030;34031;34032;34033;34034;34035;34036 24007;24008;24009;24010;24011 24008 5 994240 467340 TAAANAAAGAAENAFRAP QQEFAAGVFSNPAVRTAAANAAAGAAENAF ANAAAGAAENAFRAP_______________ R T A A P - 10 1 2 0 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 18 1 1643.8016 O14828 O14828 330 347 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 6.6502E-10 186.29 By MS/MS 5.5 2.87 1 1 2 2 6 17501000 17501000 0 13446 130 14281 34037;34038;34039;34040;34041;34042 24012;24013;24014 24013 3 1092800 0 TAADKDRGEEDADGSK KLNKAEKAWKPSSKRTAADKDRGEEDADGS AADKDRGEEDADGSKTQDLFRRVRSILNKL R T A S K T 3 1 0 4 0 0 2 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 16 2 1663.7285 Q04637 Q04637 741 756 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 3.0227E-13 162.7 By MS/MS 2 0 1 1 0 0 0 13447 1264 14282 34043 24015 24015 1 0 0 TAADVVSPGANSVDSR IQSLKEKTEKVKDPKTAADVVSPGANSVDS AADVVSPGANSVDSRVQRPKEESSEDENEV K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 0.00049073 122.46 By MS/MS By matching 2.67 0.471 1 2 1 2 980600 725380 255220 13448 1245 14283 34044;34045;34046 24016 24016 1 18936 329830 TAAENDFVTLK VEDYKKKYEDEINKRTAAENDFVTLKKDVD INKRTAAENDFVTLKKDVDNAYMIKVELQS R T A L K K 2 0 1 1 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 11 0 1207.6085 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 276 286 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 8.4078E-08 194.12 By MS/MS By MS/MS 5.46 2.9 2 2 1 2 1 1 1 2 1 5 8 12688000 7097000 5590800 + 13449 52 14284 34047;34048;34049;34050;34051;34052;34053;34054;34055;34056;34057;34058;34059 24017;24018;24019;24020;24021;24022;24023;24024;24025;24026;24027;24028 24027 12 1717700 20185000 TAAENDFVTLKK VEDYKKKYEDEINKRTAAENDFVTLKKDVD NKRTAAENDFVTLKKDVDNAYMIKVELQSK R T A K K D 2 0 1 1 0 0 1 0 0 0 1 2 0 1 0 0 2 0 0 1 0 0 12 1 1335.7034 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 276 287 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 6.4399E-07 204.56 By MS/MS By MS/MS 5.21 3.03 4 2 3 1 3 2 2 2 3 2 14 10 36645000 29633000 7011600 + 13450 52 14285 34060;34061;34062;34063;34064;34065;34066;34067;34068;34069;34070;34071;34072;34073;34074;34075;34076;34077;34078;34079;34080;34081;34082;34083 24029;24030;24031;24032;24033;24034;24035;24036;24037;24038;24039;24040;24041;24042;24043 24033 15 7631700 20384000 TAAENEFVTLK VEDFKNKYEDEINKRTAAENEFVTLKKDVD INKRTAAENEFVTLKKDVDAAYMNKVELQA R T A L K K 2 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 11 0 1221.6241 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 261 271 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.0038809 127.42 By matching By MS/MS 5.5 1.71 1 1 1 1 1 1 1 5 1796400 1276200 520110 + 13451 36;53;449 14286 34084;34085;34086;34087;34088;34089 24044 24044 1 84194 1441000 TAALAVVTTSGLEDGVPR ______________________________ LAVVTTSGLEDGVPRSRGEGTGEVVLERGP M T A P R S 3 1 0 1 0 0 1 2 0 0 2 0 0 0 1 1 3 0 0 3 0 0 18 0 1755.9367 Q9NWB7 Q9NWB7 2 19 IFT57 Intraflagellar transport protein 57 homolog yes yes 2 0.00071548 126.1 By MS/MS 6 0 1 1 974380 974380 0 13452 2666 14287 34090 24045 24045 1 7598.2 0 TAAPTVCLLVLSQAEK VEVEKTNHFAIVNLRTAAPTVCLLVLSQAE AAPTVCLLVLSQAEKVLEEVDWLITKLKGQ R T A E K V 3 0 0 0 1 1 1 0 0 0 3 1 0 0 1 1 2 0 0 2 0 0 16 0 1699.9179 Q9NVI1 Q9NVI1 1079 1094 FANCI Fanconi anemia group I protein yes yes 2 1.6983E-10 205.31 By MS/MS 3 0 1 1 468700 468700 0 13453 2654 14288 34091 24046 24046 1 12236 0 TAATFAR LRTALNLFFKLKNFKTAATFARRLLELGPK FFKLKNFKTAATFARRLLELGPKPEVAQQT K T A A R R 3 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 7 0 736.38679 P53621 P53621 1120 1126 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.020651 124.59 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 4556300 4556300 0 13454 1005 14289 34092;34093;34094;34095;34096;34097;34098;34099;34100;34101 24047;24048 24048 2 611500 0 TAATLATHELR LTSQTKLHEDLCEKRTAATLATHELRAVKG CEKRTAATLATHELRAVKGPLLYCARPPQD R T A L R A 3 1 0 0 0 0 1 0 1 0 2 0 0 0 0 0 3 0 0 0 0 0 11 0 1182.6357 Q8N1G4 Q8N1G4 371 381 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 6.5025E-05 172.98 By MS/MS 5.5 0.5 1 1 2 2668900 2668900 0 13455 1901 14290 34102;34103 24049 24049 1 84856 0 TAAVANSMNYLTK VDDYARFTILDSQGKTAAVANSMNYLTKKG GKTAAVANSMNYLTKKGMSSKEIYDDSFIR K T A T K K 3 0 2 0 0 0 0 0 0 0 1 1 1 0 0 1 2 0 1 1 0 0 13 0 1382.6864 Q9NYU2 Q9NYU2 732 744 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 1.4877E-07 177.04 By MS/MS 3 0 1 1 743460 743460 0 13456 2699 14291 34104 24050 24050 1579 1 19408 0 TAAYVNAIEK IMRTAMKYNLGLDLRTAAYVNAIEKVFKVY GLDLRTAAYVNAIEKVFKVYNEAGVTFT__ R T A E K V 3 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1078.5659 P00367;P49448 P00367 536 545 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.0020723 117.02 By MS/MS By matching 6.33 0.471 2 1 2 1 19483000 19445000 38242 13457 425 14292 34105;34106;34107 24051 24051 1 156060 117280 TACTSVEEFQVFK LKDILRVSEAEFLARTACTSVEEFQVFKKL ARTACTSVEEFQVFKKLLAREEEESESSTS R T A F K K 1 0 0 0 1 1 2 0 0 0 0 1 0 2 0 1 2 0 0 2 0 0 13 0 1544.7181 Q7Z6M4 Q7Z6M4 305 317 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 0.0017032 122.7 By MS/MS 7 0 1 1 448880 448880 0 13458 1802 14293 34108 24052 24052 1 8021.5 0 TADDPSLSLIK FFRSLKDRGFELTFKTADDPSLSLIKYGEF LTFKTADDPSLSLIKYGEFLYDNLIIFSPS K T A I K Y 1 0 0 2 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 11 0 1158.6132 P39656 P39656 78 88 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.00010431 161.17 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 27693000 27652000 41586 13459 825 14294 34109;34110;34111;34112;34113;34114 24053;24054 24053 2 613730 127540 TADFGIWER NFIQNLVFYIEAAYKTADFGIWERGDKTNQ IEAAYKTADFGIWERGDKTNQGISELNASS K T A E R G 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 9 0 1093.5193 P46020 P46020 178 186 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 2 0.0064441 131.11 By MS/MS 3 0 1 1 0 0 0 13460 875 14295 34115 24055 24055 1 0 0 TADHLFDAAYFGQK AKMKESVLMLASFEKTADHLFDAAYFGQKD KTADHLFDAAYFGQKDSVCGVSECIIMGIP K T A Q K D 3 0 0 2 0 1 0 1 1 0 1 1 0 2 0 0 1 0 1 0 0 0 14 0 1582.7416 O14802 O14802 1324 1337 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 3 0.029596 62.042 By MS/MS 3 0 1 1 422730 422730 0 13461 128 14296 34116 24056 24056 1 11035 0 TAEAGGVTGKGQDGIGSKAEK GFSELRWDDQQKVKKTAEAGGVTGKGQDGI VTGKGQDGIGSKAEKTLGDFAAEYAKSNRS K T A E K T 3 0 0 1 0 1 2 6 0 1 0 3 0 0 0 1 2 0 0 1 0 0 21 2 1959.9861 P09874 P09874 88 108 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.0063886 71.842 By MS/MS 4 0 1 1 473360 473360 0 13462 521 14297 34117 24057 24057 1 12922 0 TAEDAKDFFK EHVLIDVGTGYYVEKTAEDAKDFFKRKIDF YYVEKTAEDAKDFFKRKIDFLTKQMEKIQP K T A F K R 2 0 0 2 0 0 1 0 0 0 0 2 0 2 0 0 1 0 0 0 0 0 10 1 1170.5557 Q99471 Q99471 95 104 PFDN5 Prefoldin subunit 5 yes yes 2 0.034724 108.43 By MS/MS 10 0 1 1 113440 113440 0 13463 2269 14298 34118 24058 24058 1 120580 0 TAEELMNFSK FDGMITETKGTVLIKTAEELMNFSKGEENL TVLIKTAEELMNFSKGEENLMDAQVKAIAD K T A S K G 1 0 1 0 0 0 2 0 0 0 1 1 1 1 0 1 1 0 0 0 0 0 10 0 1168.5434 P50990 P50990 261 270 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00021405 156.16 By MS/MS 6 0 1 1 6083800 6083800 0 13464 955 14299 34119 24059 24059 1 47442 0 TAEELMNFSKGEENLMDAQVK FDGMITETKGTVLIKTAEELMNFSKGEENL NFSKGEENLMDAQVKAIADTGANVVVTGGK K T A V K A 2 0 2 1 0 1 4 1 0 0 2 2 2 1 0 1 1 0 0 1 0 0 21 1 2383.1036 P50990 P50990 261 281 CCT8 T-complex protein 1 subunit theta yes yes 2;3 3.3358E-31 248.67 By MS/MS 6 0.632 1 3 1 5 83143000 83143000 0 13465 955 14300;14301 34120;34121;34122;34123;34124 24060;24061;24062 24062 704 3 655990 0 TAEEVAALIR VWAGQKRLGQLAKWKTAEEVAALIRSLPVE LAKWKTAEEVAALIRSLPVEEQPKQIIVTR K T A I R S 3 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1071.5924 Q6P2Q9 Q6P2Q9 1841 1850 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 1.2241E-15 219.51 By MS/MS 2.6 1.02 1 1 2 1 5 3642700 3642700 0 13466 1706 14302 34125;34126;34127;34128;34129 24063;24064;24065 24064 3 153490 0 TAELLNACK ENPKMPTGEIEIKVKTAELLNACKKLPFEI IEIKVKTAELLNACKKLPFEIKNFVKKTEA K T A C K K 2 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 0 1018.5117 Q6PI48 Q6PI48 145 153 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.00021473 163.15 By MS/MS 5.5 0.5 1 1 2 4143100 4143100 0 13467 1715 14303 34130;34131 24066 24066 1 151930 0 TAELSPFIVFIAPTDQGTQTEALQQLQK IAILDIEPQTLKIVRTAELSPFIVFIAPTD TDQGTQTEALQQLQKDSEAIRSQYAHYFDL R T A Q K D 3 0 0 1 0 5 2 1 0 2 3 1 0 2 2 1 4 0 0 1 0 0 28 0 3073.5972 Q00013 Q00013 390 417 MPP1 55 kDa erythrocyte membrane protein yes yes 3 0.00035684 64.256 By MS/MS 6 0 1 1 723880 723880 0 13468 1228 14304 34132 24067 24067 1 5644.9 0 TAEQSCDQKLTNTNR TYTGSGGRDLSGNKRTAEQSCDQKLTNTNR TAEQSCDQKLTNTNRALALNCFAPINDQEG R T A N R A 1 1 2 1 1 2 1 0 0 0 1 1 0 0 0 1 3 0 0 0 0 0 15 1 1764.8061 Q96T88 Q96T88 492 506 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 3 0.019311 72.662 By MS/MS 4 0 1 1 0 0 0 13469 2262 14305 34133 24068 24068 1 0 0 TAETGYIQR HAMGGREGLIDTAVKTAETGYIQRRLIKSM IDTAVKTAETGYIQRRLIKSMESVMVKYDA K T A Q R R 1 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 0 9 0 1037.5142 P24928 P24928 854 862 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0040436 117.81 By MS/MS 2 0 1 1 0 0 0 13470 681 14306 34134 24069 24069 1 0 0 TAFEEVEEDLR MKQISKEKLKARRNRTAFEEVEEDLRLSLH RRNRTAFEEVEEDLRLSLHLQDQDSVKDAV R T A L R L 1 1 0 1 0 0 4 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 11 0 1336.6147 Q6P158 Q6P158 768 778 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.0010579 132.88 By MS/MS 3 0 1 1 591570 591570 0 13471 1698 14307 34135 24070 24070 1 15443 0 TAFETIILLTK VDISGFQLSSHTQYRTAFETIILLTKELEL TQYRTAFETIILLTKELELYKEELQTKPAL R T A T K E 1 0 0 0 0 0 1 0 0 2 2 1 0 1 0 0 3 0 0 0 0 0 11 0 1248.7329 A4D1E9 A4D1E9 249 259 GTPBP10 GTP-binding protein 10 yes yes 2 0.00058273 139.38 By MS/MS 7 0 1 1 202060 202060 0 13472 14 14308 34136 24071 24071 1 3610.8 0 TAFGIISTVK STNCRAALLHGETRKTAFGIISTVKKPRPS GETRKTAFGIISTVKKPRPSEGDEDCLPAS K T A V K K 1 0 0 0 0 0 0 1 0 2 0 1 0 1 0 1 2 0 0 1 0 0 10 0 1035.5964 P78346 P78346 237 246 RPP30 Ribonuclease P protein subunit p30 yes yes 2 0.0014964 123.75 By MS/MS 8 0 1 1 547020 547020 0 13473 1193 14309 34137 24072 24072 1 36087 0 TAFLAEDFNPEEINLDCTNPR LDQIHETKRHEVLTRTAFLAEDFNPEEINL DFNPEEINLDCTNPRYLAAGSSNAVKLSRF R T A P R Y 2 1 3 2 1 0 3 0 0 1 2 0 0 2 2 0 2 0 0 0 0 0 21 0 2465.1169 Q5HYI8 Q5HYI8 164 184 RABL3 Rab-like protein 3 yes yes 2 0.014181 64.842 By MS/MS 8 0 1 1 251980 251980 0 13474 1601 14310 34138 24073 24073 1 16623 0 TAFQEALDAAGDK ______________________________ SKTAFQEALDAAGDKLVVVDFSATWCGPCK K T A D K L 4 0 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1335.6307 P10599 P10599 9 21 TXN Thioredoxin yes yes 2 1.0357E-23 227.48 By MS/MS 10 0 1 1 0 0 0 13475 539 14311 34139 24074 24074 1 0 0 TAFSENEDDESRPAVALIR KQDCSQLVERINVFKTAFSENEDDESRPAV ENEDDESRPAVALIRKLIAVLESIERLPLH K T A I R K 3 2 1 2 0 0 3 0 0 1 1 0 0 1 1 2 1 0 0 1 0 0 19 1 2119.0182 Q9ULT8 Q9ULT8 948 966 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 3 0.048796 52.112 By MS/MS 3 0.816 1 1 1 3 1565400 1565400 0 13476 2826 14312 34140;34141;34142 24075 24075 1 49052 0 TAFVNSCYIK FGHRLQENFSLDLLKTAFVNSCYIKSEEAK LDLLKTAFVNSCYIKSEEAKRQQLGIEKEA K T A I K S 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 1 1 0 1 1 0 0 10 0 1201.5801 Q9H9J2 Q9H9J2 90 99 MRPL44 39S ribosomal protein L44, mitochondrial yes yes 2 0.0053835 106.2 By MS/MS By matching 8 0 2 1 1 2480900 2445100 35780 13477 2535 14313 34143;34144 24076 24076 1 161300 305240 TAGINVR STVTELRNRHAQGEKTAGINVRKGGISNIL NRHAQGEKTAGINVRKGGISNILEELVVQP K T A V R K 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 7 0 729.41334 P50991 P50991 490 496 CCT4 T-complex protein 1 subunit delta yes yes 2 0.047626 102.77 By MS/MS 6 0 1 1 57622000 57622000 0 13478 956 14314 34145 24077 24077 1 449340 0 TAGTLFGEGFR LKAAEHRQTVLESIRTAGTLFGEGFRAFVT ESIRTAGTLFGEGFRAFVTDWDKVTATVAG R T A F R A 1 1 0 0 0 0 1 3 0 0 1 0 0 2 0 0 2 0 0 0 0 0 11 0 1154.572 Q5T9A4;Q9NVI7 Q9NVI7 276 286 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 2.3817E-07 191.4 By MS/MS 4 2 1 1 1 1 1 5 31299000 31299000 0 13479 2655;1634 14315 34146;34147;34148;34149;34150 24078;24079;24080 24079 3 1235700 0 TAIEEVQAER LDTPLYFSYSHLVCRTAIEEVQAERKDDSH HLVCRTAIEEVQAERKDDSHPVHVDNCILN R T A E R K 2 1 0 0 0 1 3 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 10 0 1144.5724 Q32P28 Q32P28 570 579 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 2 0.00012899 162.36 By MS/MS 4.5 0.5 1 1 2 1436900 1436900 0 13480 1565 14316 34151;34152 24081 24081 1 54598 0 TAIHEVMEQGR VVCIDEFDKMSDMDRTAIHEVMEQGRVTIA DMDRTAIHEVMEQGRVTIAKAGIHARLNAR R T A G R V 1 1 0 0 0 1 2 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 11 0 1269.6136 P25205 P25205 420 430 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0012419 130.41 By MS/MS 4 0 1 1 449020 449020 0 13481 683 14317 34153 24082 24082 1 12258 0 TAIHEVMEQQTISIAK VCCIDEFDKMAEADRTAIHEVMEQQTISIA AIHEVMEQQTISIAKAGILTTLNARCSILA R T A A K A 2 0 0 0 0 2 2 0 1 3 0 1 1 0 0 1 2 0 0 1 0 0 16 0 1797.9295 P33993 P33993 456 471 MCM7 DNA replication licensing factor MCM7 yes yes 3 0.029919 66.568 By MS/MS 5 0 1 1 999960 999960 0 13482 775 14318 34154 24083 24083 530 1 41102 0 TAKAEAIVYK DEQGMAFSKSEGKRKTAKAEAIVYKHGSGR EGKRKTAKAEAIVYKHGSGRIKVNGIDYQL K T A Y K H 3 0 0 0 0 0 1 0 0 1 0 2 0 0 0 0 1 0 1 1 0 0 10 1 1092.6179 P82933 P82933 278 287 MRPS9 28S ribosomal protein S9, mitochondrial yes yes 3 0.012665 80.916 By MS/MS 7 0 1 1 0 0 0 13483 1211 14319 34155 24084 24084 1 0 0 TALAATNPAVR GFSGLNVKAFISNVKTALAATNPAVRTAAI SNVKTALAATNPAVRTAAITLLGVMYLYVG K T A V R T 4 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 11 0 1083.6037 Q14008 Q14008 762 772 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 1.504E-10 196.52 By MS/MS 2.5 0.5 1 1 2 2007700 2007700 0 13484 1405 14320 34156;34157 24085 24085 1 94104 0 TALAEAELEYNPEHVSR VYRSYKPVFWSPSSRTALAEAELEYNPEHV LAEAELEYNPEHVSRSIYVKFPLLKPSPKL R T A S R S 3 1 1 0 0 0 4 0 1 0 2 0 0 0 1 1 1 0 1 1 0 0 17 0 1927.9276 Q9NSE4 Q9NSE4 251 267 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2;3 2.97E-19 212.55 By MS/MS 5.29 1.67 1 2 1 1 1 1 7 21749000 21749000 0 13485 2624 14321 34158;34159;34160;34161;34162;34163;34164 24086;24087 24087 2 595260 0 TALALAIAQELGSK AGRAVLLAGPPGTGKTALALAIAQELGSKV KTALALAIAQELGSKVPFCPMVGSEVYSTE K T A S K V 4 0 0 0 0 1 1 1 0 1 3 1 0 0 0 1 1 0 0 0 0 0 14 0 1384.7926 Q9Y265 Q9Y265 77 90 RUVBL1 RuvB-like 1 yes yes 2;3 6.3875E-36 269.04 By MS/MS 6.25 0.433 3 1 4 22871000 22871000 0 13486 2870 14322 34165;34166;34167;34168 24088;24089;24090;24091 24088 4 179300 0 TALALEVGDIVK FAKAIQKRVPCAYDKTALALEVGDIVKVTR YDKTALALEVGDIVKVTRMNINGQWEGEVN K T A V K V 2 0 0 1 0 0 1 1 0 1 2 1 0 0 0 0 1 0 0 2 0 0 12 0 1227.7075 P46109 P46109 254 265 CRKL Crk-like protein yes yes 2 0.0084323 98.754 By MS/MS 7 0 1 1 178230 178230 0 13487 878 14323 34169 24092 24092 1 3185 0 TALAQIFR LAAKCILAGDPAVGKTALAQIFRSDGAHFQ GDPAVGKTALAQIFRSDGAHFQKSYTLTTG K T A F R S 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 8 0 918.5287 Q9BW83 Q9BW83 19 26 IFT27 Intraflagellar transport protein 27 homolog yes yes 2 0.022264 103.83 By MS/MS 9.5 0.5 1 1 2 457000 457000 0 13488 2390 14324 34170;34171 24093;24094 24094 2 372400 0 TALASGGVLDASGDYR PPSPRSVDQVKAQLRTALASGGVLDASGDY ALASGGVLDASGDYRVYRGLLKTTMDPNDV R T A Y R V 3 1 0 2 0 0 0 3 0 0 2 0 0 0 0 2 1 0 1 1 0 0 16 0 1551.7529 O43505 O43505 65 80 B4GAT1 Beta-1,4-glucuronyltransferase 1 yes yes 2 5.6278E-15 208.82 By MS/MS 6.5 0.5 1 1 2 10025000 10025000 0 13489 205 14325 34172;34173 24095 24095 1 87106 0 TALFEEISR QGAVESIAMKNPKERTALFEEISRSGELAQ KNPKERTALFEEISRSGELAQEYDKRKKEM R T A S R S 1 1 0 0 0 0 2 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 9 0 1064.5502 Q14683 Q14683 152 160 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 0.00066173 149.72 By MS/MS 2.5 1.12 1 1 1 1 4 3569700 3569700 0 13490 1440 14326 34174;34175;34176;34177 24096 24096 1 97163 0 TALGVAELTVTDLFR EDGSVGEGDLSCILKTALGVAELTVTDLFR TALGVAELTVTDLFRAIDQEEKGKITFADF K T A F R A 2 1 0 1 0 0 1 1 0 0 3 0 0 1 0 0 3 0 0 2 0 0 15 0 1604.8774 Q8NF37 Q8NF37 447 461 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2;3 4.1311E-40 270.67 By MS/MS 6 0 2 2 3356500 3356500 0 13491 1967 14327 34178;34179 24097;24098;24099;24100 24097 4 26174 0 TALIHDGLAR GGVMDVNTALQEVLKTALIHDGLARGIREA QEVLKTALIHDGLARGIREAAKALDKRQAH K T A A R G 2 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1065.5931 P25398 P25398 24 33 RPS12 40S ribosomal protein S12 yes yes 2;3 0.021573 103.26 By MS/MS By matching 10 0 4 3 1 8350300 8274500 75844 13492 684 14328 34180;34181;34182;34183 24101;24102;24103 24102 3 8794900 1945400 TALINFLVQD LLQGRSIKKSFLSPRTALINFLVQD_____ FLSPRTALINFLVQD_______________ R T A Q D - 1 0 1 1 0 1 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1132.6128 Q15031 Q15031 894 903 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.0001288 168.83 By MS/MS 6 1.41 1 1 1 1 1 5 2467200 2467200 0 13493 1467 14329 34184;34185;34186;34187;34188 24104;24105;24106;24107;24108;24109 24106 6 66838 0 TALLDAAGVASLLTTAEVVVTEIPKEEK NMVEKGIIDPTKVVRTALLDAAGVASLLTT TTAEVVVTEIPKEEKDPGMGAMGGMGGGMG R T A E K D 5 0 0 1 0 0 4 1 0 1 4 2 0 0 1 1 4 0 0 4 0 0 28 1 2867.5743 P10809 P10809 527 554 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.0049291 51.857 By MS/MS 6 0 1 1 128980 128980 0 13494 544 14330 34189 24110;24111 24111 2 1005.8 0 TALLDISCVK SYLITSVELLESKLKTALLDISCVKHIIYV ESKLKTALLDISCVKHIIYVDNKAINKAEY K T A V K H 1 0 0 1 1 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1118.6005 O60488 O60488 214 223 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 2 0.00092554 126.31 By MS/MS 5 0 1 1 1718600 1718600 0 13495 248 14331 34190 24112 24112 1 70640 0 TALNLFFK THSNLQPVHMILVLRTALNLFFKLKNFKTA HMILVLRTALNLFFKLKNFKTAATFARRLL R T A F K L 1 0 1 0 0 0 0 0 0 0 2 1 0 2 0 0 1 0 0 0 0 0 8 0 952.5382 P53621 P53621 1107 1114 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0020118 157.33 By MS/MS 3.8 1.72 1 1 1 1 1 5 2299400 2299400 0 13496 1005 14332 34191;34192;34193;34194;34195 24113;24114;24115;24116 24114 4 54429 0 TALPSLELK LPGVREKENLVQAFKTALPSLELKLQLK__ LVQAFKTALPSLELKLQLK___________ K T A L K L 1 0 0 0 0 0 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 9 0 970.5699 Q99766 Q99766 203 211 ATP5S ATP synthase subunit s, mitochondrial yes yes 2 0.013786 93.162 By MS/MS 9 0.816 1 1 1 3 2024200 2024200 0 13497 2290 14333 34196;34197;34198 24117 24117 1 766060 0 TALQEEIK ASNQREEYLLLRLFKTALQEEIKSKVDQIQ LLLRLFKTALQEEIKSKVDQIQEIVTGNPT K T A I K S 1 0 0 0 0 1 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 0 930.50221 P46940;Q86VI3 P46940 1028 1035 IQGAP1;IQGAP3 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP3 no no 2 0.015038 113.18 By MS/MS 2.5 0.5 1 1 2 1024800 1024800 0 13498 892;1827 14334 34199;34200 24118 24118 1 30213 0 TALSAVDMTQR VHPGASMVINEDGSRTALSAVDMTQREAVA DGSRTALSAVDMTQREAVAKQLLTPATGAP R T A Q R E 2 1 0 1 0 1 0 0 0 0 1 0 1 0 0 1 2 0 0 1 0 0 11 0 1191.5918 O95602 O95602 505 515 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.0025876 112.85 By MS/MS 2 0 1 1 220630 220630 0 13499 401 14335 34201 24119 24119 213 1 10966 0 TALTTTISSR GIITELGVFAPEELRTALTTTISSRDGTLD PEELRTALTTTISSRDGTLDGPQM______ R T A S R D 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 4 0 0 0 0 0 10 0 1049.5717 Q9BV20 Q9BV20 351 360 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 0.00019703 156.83 By MS/MS 7 0 1 1 6851700 6851700 0 13500 2369 14336 34202 24120 24120 1 122440 0 TALVANTSNMPVAAR LTMEVDGKVESIMKRTALVANTSNMPVAAR TALVANTSNMPVAAREASIYTGITLSEYFR R T A A R E 4 1 2 0 0 0 0 0 0 0 1 0 1 0 1 1 2 0 0 2 0 0 15 0 1514.7875 P38606 P38606 309 323 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 2 4.4162E-63 294.4 By MS/MS 5 0 1 1 629130 629130 0 13501 819 14337 34203 24121 24121 562 1 25860 0 TALYNYIFAK FAPSPTGFLHLGGLRTALYNYIFAKKYQGS LGGLRTALYNYIFAKKYQGSFILRLEDTDQ R T A A K K 2 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 1 0 2 0 0 0 10 0 1202.6336 Q5JPH6 Q5JPH6 56 65 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 1.4106E-06 177.7 By MS/MS 6 0 1 1 8762100 8762100 0 13502 1604 14338 34204 24122 24122 1 68327 0 TALYVTPLDR ERFVVTAPPARNRSKTALYVTPLDRVTEFG RNRSKTALYVTPLDRVTEFGGELHEDGGKL K T A D R V 1 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 2 0 1 1 0 0 10 0 1147.6237 Q9UFW8 Q9UFW8 17 26 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 2 0.021573 91.265 By MS/MS 9 0 1 1 480900 480900 0 13503 2769 14339 34205 24123 24123 1 275990 0 TAMNVNDLFLAIAK YADDNSLLFMETSAKTAMNVNDLFLAIAKK KTAMNVNDLFLAIAKKLPKSEPQNLGGAAG K T A A K K 3 0 2 1 0 0 0 0 0 1 2 1 1 1 0 0 1 0 0 1 0 0 14 0 1519.8068 P61020 P61020 166 179 RAB5B Ras-related protein Rab-5B yes yes 2 0.039641 66.326 By MS/MS 9 0 1 1 50505 50505 0 13504 1084 14340 34206 24124 24124 854 1 28985 0 TAPYVVTGSVDQTVK LNAHEHFVTSLDFHKTAPYVVTGSVDQTVK TAPYVVTGSVDQTVKVWECR__________ K T A V K V 1 0 0 1 0 1 0 1 0 0 0 1 0 0 1 1 3 0 1 4 0 0 15 0 1563.8144 P43034 P43034 391 405 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 2 0.00034381 140.91 By MS/MS 1 0 1 1 386600 386600 0 13505 860 14341 34207 24125 24125 1 18888 0 TAQAAAALR EGFRRARHVVGEIRRTAQAAAALRRGDYRA VGEIRRTAQAAAALRRGDYRAFGRLMVESH R T A L R R 5 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 871.48756 P51570 P51570 288 296 GALK1 Galactokinase yes yes 2 0.032362 95.502 By MS/MS 7 0 1 1 0 0 0 13506 967 14342 34208 24126 24126 1 0 0 TAQCFLR KDGVWNLQNEVTKERTAQCFLRVDDESMQR QNEVTKERTAQCFLRVDDESMQRFHNRVRQ R T A L R V 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 7 0 894.43817 Q6P2Q9 Q6P2Q9 1225 1231 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.035712 111.01 By MS/MS 2 0.816 1 1 1 3 2478800 2478800 0 13507 1706 14343 34209;34210;34211 24127 24127 1 112890 0 TAQEVETYRR FEKNFYQEHPDLARRTAQEVETYRRSKEIT DLARRTAQEVETYRRSKEITVRGHNCPKPV R T A R R S 1 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 10 1 1251.6208 P17844 P17844 69 78 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.026796 101.46 By MS/MS 5 0 1 1 854000 854000 0 13508 616 14344 34212 24128 24128 1 35103 0 TAQGGLVANR ______________________________ ______________________________ M T A N R G 2 1 1 0 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 0 10 0 985.53049 Q5J8M3 Q5J8M3 2 11 EMC4 ER membrane protein complex subunit 4 yes yes 2 0.0013113 112.36 By MS/MS 9.5 0.5 1 1 2 3943800 3943800 0 13509 1603 14345 34213;34214 24129 24129 1 2295700 0 TAQGLSPVDQR VEYDCDNLQHSKKGKTAQGLSPVDQRKCER KKGKTAQGLSPVDQRKCERLLLYLYCHELS K T A Q R K 1 1 0 1 0 2 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 11 0 1170.5993 Q9UPN9 Q9UPN9 954 964 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.0032675 115 By MS/MS 3 0 1 1 1046900 1046900 0 13510 2852 14346 34215 24130 24130 1 27331 0 TAQGSLSLK HAIEESVVLIYDPIKTAQGSLSLKAYRLTP IYDPIKTAQGSLSLKAYRLTPKLMEVCKEK K T A L K A 1 0 0 0 0 1 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 903.50255 O15372 O15372 157 165 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 2 0.011258 102.06 By MS/MS By matching 7 0 2 1 1 12067000 12038000 28982 13511 173 14347 34216;34217 24131 24131 1 215130 118980 TAQSGALRDVSEELSR GSSQAPRKPEGAQARTAQSGALRDVSEELS AQSGALRDVSEELSRQLEDILSTYCVDNNQ R T A S R Q 2 2 0 1 0 1 2 1 0 0 2 0 0 0 0 3 1 0 0 1 0 0 16 1 1717.8595 P40222 P40222 62 77 TXLNA Alpha-taxilin yes yes 2;3 0.0029059 125.84 By MS/MS 5 0 2 2 8117500 8117500 0 13512 827 14348 34218;34219 24132;24133 24133 2 333660 0 TASDMVSTSR QEVIETLLSLEKQTRTASDMVSTSRILVAV EKQTRTASDMVSTSRILVAVVKMCYEAKEW R T A S R I 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 3 2 0 0 1 0 0 10 0 1053.4761 O00232 O00232 56 65 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.029438 106.88 By MS/MS 6 0 1 1 0 0 0 13513 81 14349 34220 24134 24134 1 0 0 TASEPSAQLSYASTGR LQMLLTEYLDMKNTRTASEPSAQLSYASTG ASEPSAQLSYASTGREFAAFFAKKKPQRPK R T A G R E 3 1 0 0 0 1 1 1 0 0 1 0 0 0 1 4 2 0 1 0 0 0 16 0 1624.7693 Q96A65 Q96A65 408 423 EXOC4 Exocyst complex component 4 yes yes 2 0.0033075 110.92 By MS/MS 4 0 1 1 502600 502600 0 13514 2118 14350 34221 24135 24135 1 13721 0 TASFSESR LLNASGSTSTPAPSRTASFSESRADEVAPA STPAPSRTASFSESRADEVAPAKKAKPAMP R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.0046143 138.54 By MS/MS By matching 3.67 1.7 1 1 2 1 1 5 1 7470500 7448900 21594 13515 1001 14351 34222;34223;34224;34225;34226;34227 24136;24137;24138 24138 3 203420 45121 TASFSESRADEVAPAKK LLNASGSTSTPAPSRTASFSESRADEVAPA SFSESRADEVAPAKKAKPAMPQDSVPSPRS R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 0.0051697 97.904 By MS/MS 4 0.816 1 1 1 3 5007500 5007500 0 13516 1001 14352 34228;34229;34230 24139 24139 1 143150 0 TASNIGGFNAAIK ASVGIMTLSPFDQMKTASNIGGFNAAIKNS MKTASNIGGFNAAIKNSPPAMSQYITVGSN K T A I K N 3 0 2 0 0 0 0 2 0 2 0 1 0 1 0 1 1 0 0 0 0 0 13 0 1262.6619 Q9H2M9 Q9H2M9 283 295 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 1.2236E-17 221.32 By MS/MS 3.5 0.5 1 1 2 2747500 2747500 0 13517 2481 14353 34231;34232 24140 24140 1 72179 0 TASNVEEAFINTAK FAREHGLIFMETSAKTASNVEEAFINTAKE KTASNVEEAFINTAKEIYEKIQEGVFDINN K T A A K E 3 0 2 0 0 0 2 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 14 0 1493.7362 P61019 P61019 152 165 RAB2A Ras-related protein Rab-2A yes yes 2 3.9314E-46 317.81 By MS/MS 9 0 1 1 988240 988240 0 13518 1083 14354 34233 24141 24141 1 567160 0 TASQEGCQELTQEQR VPGKDQLFSQPPVLRTASQEGCQELTQEQR TASQEGCQELTQEQRDQLRADISIIKGRYR R T A Q R D 1 1 0 0 1 4 3 1 0 0 1 0 0 0 0 1 2 0 0 0 0 0 15 0 1763.7744 O43933 O43933 1179 1193 PEX1 Peroxisome biogenesis factor 1 yes yes 2 6.964E-63 343.47 By MS/MS 3 0 1 1 340470 340470 0 13519 235 14355 34234 24142 24142 1 8888 0 TASQGQWGR NIPKAKSLDGVTNDRTASQGQWGRAWEVDW GVTNDRTASQGQWGRAWEVDWFSLASVIFL R T A G R A 1 1 0 0 0 2 0 2 0 0 0 0 0 0 0 1 1 1 0 0 0 0 9 0 989.46789 Q9UBM7 Q9UBM7 23 31 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.0012339 138.06 By MS/MS 1.5 0.5 1 1 2 910210 910210 0 13520 2753 14356 34235;34236 24143;24144 24143 2 44471 0 TASSVIELTCTK VVVTYSKGYPCGGNKTASSVIELTCTKTVG GNKTASSVIELTCTKTVGRPAFKRFDIDSC K T A T K T 1 0 0 0 1 0 1 0 0 1 1 1 0 0 0 2 3 0 0 1 0 0 12 0 1308.6595 P11717 P11717 2087 2098 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0004881 139.15 By MS/MS 1.5 0.5 1 1 2 572730 572730 0 13521 557 14357 34237;34238 24145;24146 24146 2 28340 0 TASTNNIAQAR ______________________________ MSSKTASTNNIAQARRTVQQLRLEASIERI K T A A R R 3 1 2 0 0 1 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 11 0 1145.5789 Q9UBI6 Q9UBI6 5 15 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 2 0.00042232 145.9 By MS/MS 10 0 1 1 719700 719700 0 13522 2751 14358 34239 24147 24147 1 764970 0 TASTSFTNIAYDLCAK DEEEDMVIIYNRVPKTASTSFTNIAYDLCA ASTSFTNIAYDLCAKNKYHVLHINTTKNNP K T A A K N 3 0 1 1 1 0 0 0 0 1 1 1 0 1 0 2 3 0 1 0 0 0 16 0 1761.8244 Q7LGA3 Q7LGA3 84 99 HS2ST1 Heparan sulfate 2-O-sulfotransferase 1 yes yes 2 2.4298E-07 159.66 By MS/MS 7 0 1 1 683780 683780 0 13523 1773 14359 34240 24148 24148 1 12219 0 TASVFLLEK WSCDGRRLASGSFDKTASVFLLEKDRLVKE SGSFDKTASVFLLEKDRLVKENNYRGHGDS K T A E K D 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 1 0 0 9 0 1006.5699 Q96J01 Q96J01 78 86 THOC3 THO complex subunit 3 yes yes 2 0.0066554 128.12 By MS/MS 7.5 0.5 1 1 2 837450 837450 0 13524 2204 14360 34241;34242 24149 24149 1 45189 0 TASVFLLEKDR WSCDGRRLASGSFDKTASVFLLEKDRLVKE SFDKTASVFLLEKDRLVKENNYRGHGDSVD K T A D R L 1 1 0 1 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 1 0 0 11 1 1277.698 Q96J01 Q96J01 78 88 THOC3 THO complex subunit 3 yes yes 2 0.012828 123.79 By MS/MS 8 0 1 1 1132100 1132100 0 13525 2204 14361 34243 24150 24150 1 74684 0 TASWLAAELSK AITIAQAMIFCHTRKTASWLAAELSKEGHQ HTRKTASWLAAELSKEGHQVALLSGEMMVE K T A S K E 3 0 0 0 0 0 1 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 11 0 1175.6186 Q9NUU7 Q9NUU7 344 354 DDX19A ATP-dependent RNA helicase DDX19A no no 2 0.0015187 126.71 By MS/MS 6 0 1 1 2644600 2644600 0 13526 2643 14362 34244 24151 24151 1 20622 0 TATAVAHCK SKGPLQSVQVFGRKKTATAVAHCKRGNGLI VFGRKKTATAVAHCKRGNGLIKVNGRPLEM K T A C K R 3 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 9 0 957.4702 P62249 P62249 18 26 RPS16 40S ribosomal protein S16 yes yes 2 0.00022853 162.25 By MS/MS By matching 10 0 2 1 1 3845700 3792200 53545 13527 1120 14363 34245;34246 24152 24152 1 4030700 1373400 TATAVAHCKR SKGPLQSVQVFGRKKTATAVAHCKRGNGLI FGRKKTATAVAHCKRGNGLIKVNGRPLEMI K T A K R G 3 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 1 0 0 10 1 1113.5713 P62249 P62249 18 27 RPS16 40S ribosomal protein S16 yes yes 2 3.8479E-06 182.98 By MS/MS By matching 10 0 2 1 1 340640 333110 7531.1 13528 1120 14364 34247;34248 24153 24153 1 354060 193170 TATEEWGTEDWNEDLSETK NTGHFEPDDGTSAWRTATEEWGTEDWNEDL EWGTEDWNEDLSETKIFTASNVSSVPLPAE R T A T K I 1 0 1 2 0 0 5 1 0 0 1 1 0 0 0 1 4 2 0 0 0 0 19 0 2239.9393 Q14157 Q14157 239 257 UBAP2L Ubiquitin-associated protein 2-like yes yes 2 5.1197E-56 278.93 By MS/MS 3.5 0.5 1 1 2 1090500 1090500 0 13529 1411 14365 34249;34250 24154 24154 1 28638 0 TATEKPLGELWK AVHEDIRVLSEDAIRTATEKPLGELWK___ AIRTATEKPLGELWK_______________ R T A W K - 1 0 0 0 0 0 2 1 0 0 2 2 0 0 1 0 2 1 0 0 0 0 12 1 1371.7398 P23919 P23919 201 212 DTYMK Thymidylate kinase yes yes 2 0.0080365 132.32 By MS/MS 9 0 1 1 494980 494980 0 13530 675 14366 34251 24155 24155 1 284070 0 TATESFASDPILYRPVAVALDTK HGTHEYHAETIKNVRTATESFASDPILYRP DPILYRPVAVALDTKGPEIRTGLIKGSGTA R T A T K G 4 1 0 2 0 0 1 0 0 1 2 1 0 1 2 2 3 0 1 2 0 0 23 1 2464.285 P14618 P14618 93 115 PKM Pyruvate kinase PKM yes yes 2;3 7.9637E-08 125.51 By MS/MS 6 0 2 2 27353000 27353000 0 13531 588 14367 34252;34253 24156;24157 24156 2 213300 0 TATESFASDPILYRPVAVALDTKGPEIR HGTHEYHAETIKNVRTATESFASDPILYRP RPVAVALDTKGPEIRTGLIKGSGTAEVELK R T A I R T 4 2 0 2 0 0 2 1 0 2 2 1 0 1 3 2 3 0 1 2 0 0 28 2 3016.587 P14618 P14618 93 120 PKM Pyruvate kinase PKM yes yes 4 0.0024964 57.152 By MS/MS 6 0 1 1 11815000 11815000 0 13532 588 14368 34254 24158 24158 1 92133 0 TATFENIVCVLNR AGSELLQRCESLEKKTATFENIVCVLNREV KKTATFENIVCVLNREVERVAMTAEACSRQ K T A N R E 1 1 2 0 1 0 1 0 0 1 1 0 0 1 0 0 2 0 0 2 0 0 13 0 1535.7766 Q12933 Q12933 279 291 TRAF2 TNF receptor-associated factor 2 yes yes 2 6.1524E-41 310.53 By MS/MS 6 0 1 1 0 0 0 13533 1317 14369 34255 24159 24159 1 0 0 TATITEPR GNWVLIEGVDQPIVKTATITEPRGNEEAQI VDQPIVKTATITEPRGNEEAQIFRPLKFNT K T A P R G 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 3 0 0 0 0 0 8 0 887.47125 Q15029 Q15029 562 569 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.021797 104.44 By MS/MS By matching 4 0 2 1 1 1675300 1646300 28979 13534 1466 14370 34256;34257 24160 24160 1 44943 60555 TATLRPYLSAVR ______________________________ ______________________________ M T A V R A 2 2 0 0 0 0 0 0 0 0 2 0 0 0 1 1 2 0 1 1 0 0 12 1 1346.767 P59998 P59998 2 13 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.025494 98.04 By MS/MS 9.5 0.5 1 1 2 787000 787000 0 13535 1062 14371 34258;34259 24161 24161 1 551360 0 TATQLAVNK VEEGLHPQIIIRAFRTATQLAVNKIKEIAV IIRAFRTATQLAVNKIKEIAVTVKKADKVE R T A N K I 2 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 9 0 944.5291 Q99832 Q99832 127 135 CCT7 T-complex protein 1 subunit eta yes yes 2 1.9371E-08 209.58 By MS/MS 5.27 2.18 1 1 2 2 2 1 1 1 11 294130000 294130000 0 13536 2295 14372 34260;34261;34262;34263;34264;34265;34266;34267;34268;34269;34270 24162;24163;24164;24165;24166;24167;24168 24166 7 3146300 0 TATTVGISR TLQGRKSRGTDLHSKTATTVGISREHAKIF TDLHSKTATTVGISREHAKIFNYGRIYGAG K T A S R E 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 3 0 0 1 0 0 9 0 904.49779 P54098 P54098 935 943 POLG DNA polymerase subunit gamma-1 yes yes 2 0.011002 102.62 By MS/MS 3 0 1 1 493050 493050 0 13537 1011 14373 34271 24169 24169 1 12871 0 TAVAPIERVK AKDFLAGGVAAAISKTAVAPIERVKLLLQV AAISKTAVAPIERVKLLLQVQHASKQITAD K T A V K L 2 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 10 1 1082.6448 P05141;Q9H0C2;P12235;P12236 P05141 24 33 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 0.0025959 105.2 By MS/MS By MS/MS 6.92 2.98 1 1 1 1 4 2 2 10 2 9490400 9394500 95884 13538 469;563;562 14374 34272;34273;34274;34275;34276;34277;34278;34279;34280;34281;34282;34283 24170;24171;24172;24173;24174 24172 5 1208400 818010 TAVCDIPPR KNSSYFVEWIPNNVKTAVCDIPPRGLKMSA IPNNVKTAVCDIPPRGLKMSATFIGNSTAI K T A P R G 1 1 0 1 1 0 0 0 0 1 0 0 0 0 2 0 1 0 0 1 0 0 9 0 1027.5121 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;P04350;Q3ZCM7 P68371 351 359 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB8 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-8 chain no no 2 0.0019217 133.86 By MS/MS By matching 7 1 3 3 1 1 7 1 169580000 169500000 85424 13539 1187;490;1400;2375;451;1572 14375 34284;34285;34286;34287;34288;34289;34290;34291 24175;24176;24177;24178;24179;24180;24181;24182;24183;24184;24185;24186;24187;24188;24189;24190;24191;24192 24176 18 2070400 261990 TAVCDIPPRGLK KNSSYFVEWIPNNVKTAVCDIPPRGLKMSA NVKTAVCDIPPRGLKMSATFIGNSTAIQEL K T A L K M 1 1 0 1 1 0 0 1 0 1 1 1 0 0 2 0 1 0 0 1 0 0 12 1 1325.7126 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;P04350;Q3ZCM7 P68371 351 362 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB4A;TUBB8 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-8 chain no no 3 0.052379 91.549 By MS/MS 7.5 1.12 1 1 1 1 4 7347700 7347700 0 13540 1187;490;1400;2375;451;1572 14376 34292;34293;34294;34295 24193 24193 1 181970 0 TAVDGPDLEMLTGQER YIPPHAALCLEVTLKTAVDGPDLEMLTGQE AVDGPDLEMLTGQERVALANRKRECGNAHY K T A E R V 1 1 0 2 0 1 2 2 0 0 2 0 1 0 1 0 2 0 0 1 0 0 16 0 1730.8145 Q14318 Q14318 202 217 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 4.683E-29 244.73 By MS/MS 6.5 0.5 1 1 2 7408300 7408300 0 13541 1428 14377 34296;34297 24194 24194 1 59634 0 TAVEFLSK LENLVLQAKIHMPEKTAVEFLSKAVDSPNI KIHMPEKTAVEFLSKAVDSPNIKAVDEAVI K T A S K A 1 0 0 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 8 0 893.48583 Q7L2E3 Q7L2E3 831 838 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.01563 112.41 By MS/MS 3.5 1.12 1 1 1 1 4 15866000 15866000 0 13542 1763 14378 34298;34299;34300;34301 24195;24196 24195 2 590500 0 TAVETAVLLLR LGIWEPLAVKLQTYKTAVETAVLLLRIDDI QTYKTAVETAVLLLRIDDIVSGHKKKGDDQ K T A L R I 2 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 11 0 1184.7129 P49368 P49368 508 518 CCT3 T-complex protein 1 subunit gamma yes yes 2 5.0727E-16 219.8 By MS/MS 5.58 2.63 1 1 1 1 1 3 1 1 1 1 12 264010000 264010000 0 13543 916 14379 34302;34303;34304;34305;34306;34307;34308;34309;34310;34311;34312;34313 24197;24198;24199;24200;24201;24202;24203;24204;24205;24206;24207;24208;24209 24202 13 7539900 0 TAVVIDLGEAFTK ______________________________ EKTAVVIDLGEAFTKCGFAGETGPRCIIPS K T A T K C 2 0 0 1 0 0 1 1 0 1 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1362.7395 Q9NZ32 Q9NZ32 14 26 ACTR10 Actin-related protein 10 yes yes 2 0.0023509 117.86 By MS/MS 7 0 1 1 109700 109700 0 13544 2704 14380 34314 24210 24210 1 1960.3 0 TAVVVGTITDDVR SRMIRKMKLPGRENKTAVVVGTITDDVRVQ NKTAVVVGTITDDVRVQEVPKLKVCALRVT K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 Q07020 Q07020 79 91 RPL18 60S ribosomal protein L18 yes yes 2 4.525E-35 265.36 By MS/MS By MS/MS 9 0.707 1 2 1 2 2 2210200 2024700 185500 13545 1278 14381 34315;34316;34317;34318 24211;24212 24212 2 1211400 1933000 TAVWEEGPGGELVIQQK LEHLPQEVPYNVQQKTAVWEEGPGGELVIQ VWEEGPGGELVIQQKLLVPKESYVKLLIGP K T A Q K L 1 0 0 0 0 2 3 3 0 1 1 1 0 0 1 0 1 1 0 2 0 0 17 0 1839.9367 O75616 O75616 372 388 ERAL1 GTPase Era, mitochondrial yes yes 2;3 2.4456E-18 229.97 By MS/MS 7.5 0.5 2 2 4 10441000 10441000 0 13546 321 14382 34319;34320;34321;34322 24213;24214 24213 2 206630 0 TAWGQQPDLAANEAQLLR YAFNSGNVERFQTLKTAWGQQPDLAANEAQ GQQPDLAANEAQLLRKIQLLCLMEMTFTRP K T A L R K 4 1 1 1 0 3 1 1 0 0 3 0 0 0 1 0 1 1 0 0 0 0 18 0 1981.0017 Q9UNM6 Q9UNM6 253 270 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 1.1268E-18 201.72 By MS/MS 7 0 1 1 1669900 1669900 0 13547 2845 14383 34323 24215 24215 1 29841 0 TAYGPNGMNK YRNIQACKELAQTTRTAYGPNGMNKMVINH AQTTRTAYGPNGMNKMVINHLEKLFVTNDA R T A N K M 1 0 2 0 0 0 0 2 0 0 0 1 1 0 1 0 1 0 1 0 0 0 10 0 1051.4757 P50990 P50990 45 54 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00085849 129.42 By MS/MS 6 0 1 1 4639600 4639600 0 13548 955 14384 34324 24216 24216 1 36180 0 TCDALQAK FYKPNTAMLLGDAKKTCDALQAKVRESYQK LLGDAKKTCDALQAKVRESYQK________ K T C A K V 2 0 0 1 1 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 8 0 905.42767 Q13423 Q13423 1072 1079 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.0018492 159.2 By MS/MS 1 0 1 1 468500 468500 0 13549 1367 14385 34325 24217 24217 1 22890 0 TCDGVQCAFEELVEK FARKHSMLFIEASAKTCDGVQCAFEELVEK TCDGVQCAFEELVEKIIQTPGLWESENQNK K T C E K I 1 0 0 1 2 1 3 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 15 0 1783.7757 Q9NP72 Q9NP72 154 168 RAB18 Ras-related protein Rab-18 yes yes 2 0.00045804 125.03 By MS/MS 9 0 1 1 128000 128000 0 13550 2573 14386 34326 24218 24218 1 73459 0 TCDISFSDPDDLLNFK QLRIQKDINELNLPKTCDISFSDPDDLLNF CDISFSDPDDLLNFKLVICPDEGFYKSGKF K T C F K L 0 0 1 4 1 0 0 0 0 1 2 1 0 2 1 2 1 0 0 0 0 0 16 0 1885.8404 P61081 P61081 46 61 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 2 0.0029858 112.02 By MS/MS 9 0 1 1 102900 102900 0 13551 1086 14387 34327 24219 24219 1 59052 0 TCDLEEFQTCLVR ISSPAVERLISSLLRTCDLEEFQTCLVRHC LRTCDLEEFQTCLVRHCKHAFGCALVHTSG R T C V R H 0 1 0 1 2 1 2 0 0 0 2 0 0 1 0 0 2 0 0 1 0 0 13 0 1669.744 Q9BQ52 Q9BQ52 631 643 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 6.8948E-26 248.98 By MS/MS 4 0 1 1 792260 792260 0 13552 2305 14388 34328 24220 24220 1 21628 0 TCEESSFCKR VCLGITLAVDRSNFKTCEESSFCKRQRSIR RSNFKTCEESSFCKRQRSIRPGLSPYRALL K T C K R Q 0 1 0 0 2 0 2 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 10 1 1302.5333 Q14697 Q14697 40 49 GANAB Neutral alpha-glucosidase AB yes yes 2 0.00148 149.57 By MS/MS 4 0 1 1 697660 697660 0 13553 1443 14389 34329 24221 24221 1 19045 0 TCEKVEER PFAISLIESVRTYERTCEKVEERNTISLLV SVRTYERTCEKVEERNTISLLVAGLKKEVQ R T C E R N 0 1 0 0 1 0 3 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 8 1 1049.4812 Q14204 Q14204 791 798 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00016899 176.09 By MS/MS 1 0 1 1 0 0 0 13554 1421 14390 34330 24222 24222 1 0 0 TCFIILSK VIQGAVEYPDPIAQKTCFIILSKLVELWGG PDPIAQKTCFIILSKLVELWGGKDGPVGFA K T C S K L 0 0 0 0 1 0 0 0 0 2 1 1 0 1 0 1 1 0 0 0 0 0 8 0 980.53649 O43592 O43592 844 851 XPOT Exportin-T yes yes 2 0.0052244 136.27 By MS/MS 4.5 0.5 1 1 2 1039500 1039500 0 13555 208 14391 34331;34332 24223 24223 1 30412 0 TCFSPNR AYYDTERIGVDLIMKTCFSPNRVIGLSSDL IGVDLIMKTCFSPNRVIGLSSDLQQVGGAS K T C N R V 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 7 0 880.38614 O00303 O00303 255 261 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.020742 124.34 By MS/MS By matching 7 0 2 1 1 5857900 5830200 27704 13556 88 14392 34333;34334 24224 24224 1 104190 113730 TCGFDFTGAVEDISK DAGMQLQGYRYYDPKTCGFDFTGAVEDISK TCGFDFTGAVEDISKIPEQSVLLLHACAHN K T C S K I 1 0 0 2 1 0 1 2 0 1 0 1 0 2 0 1 2 0 0 1 0 0 15 0 1645.7294 P00505 P00505 186 200 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 1.2549E-28 242.97 By MS/MS 7 0 1 1 989410 989410 0 13557 430 14393 34335 24225 24225 1 17681 0 TCHSFIINEK HVVAASKAMKMGDWKTCHSFIINEKMNGKV MGDWKTCHSFIINEKMNGKVWDLFPEADKV K T C E K M 0 0 1 0 1 0 1 0 1 2 0 1 0 1 0 1 1 0 0 0 0 0 10 0 1247.5969 Q99613;B5ME19 Q99613 751 760 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.00072098 145.9 By MS/MS By matching 4.75 1.2 1 3 2 1 1 7 1 15701000 15610000 91370 13558 2275 14394 34336;34337;34338;34339;34340;34341;34342;34343 24226;24227 24226 2 430820 190920 TCLICADTFR TCSKLAYYYQRKGWKTCLICADTFRAGAFD RKGWKTCLICADTFRAGAFDQLKQNATKAR K T C F R A 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 10 0 1255.5689 P61011 P61011 132 141 SRP54 Signal recognition particle 54 kDa protein yes yes 2 0.00093297 125.97 By MS/MS 6.5 0.5 1 1 2 7288700 7288700 0 13559 1082 14395 34344;34345 24228 24228 1 59452 0 TCLLIVFSK IRKKLVIVGDGACGKTCLLIVFSKDQFPEV DGACGKTCLLIVFSKDQFPEVYVPTVFENY K T C S K D 0 0 0 0 1 0 0 0 0 1 2 1 0 1 0 1 1 0 0 1 0 0 9 0 1079.6049 P61586;P62745;P08134 P61586 19 27 RHOA;RHOB;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoB;Rho-related GTP-binding protein RhoC no no 2 0.010578 103.55 By MS/MS 9 0 1 1 117020 117020 0 13560 1101;1141;498 14396 34346 24229 24229 1 67156 0 TCLLNETGDEPFQYKN SANCDPFSVTEALIRTCLLNETGDEPFQYK CLLNETGDEPFQYKN_______________ R T C K N - 0 0 2 1 1 1 2 1 0 0 2 1 0 1 1 0 2 0 1 0 0 0 16 1 1927.8622 P15104 P15104 358 373 GLUL Glutamine synthetase yes yes 2 2.6308E-14 253.42 By MS/MS 8 0.816 1 1 1 3 2007800 2007800 0 13561 596 14397 34347;34348;34349 24230;24231 24230 2 115940 0 TCTFILR GGERYNFFTGCPKAKTCTFILRGGAEQFME FTGCPKAKTCTFILRGGAEQFMEETERSLH K T C L R G 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 7 0 909.47422 Q99832 Q99832 369 375 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0045299 181.2 By MS/MS 5.12 2.71 1 1 1 1 1 1 1 1 8 131030000 131030000 0 13562 2295 14398 34350;34351;34352;34353;34354;34355;34356;34357 24232;24233;24234;24235;24236 24232 5 1355200 0 TCVADESAENCDK EDHVKLVNEVTEFAKTCVADESAENCDKSL AKTCVADESAENCDKSLHTLFGDKLCTVAT K T C D K S 2 0 1 2 2 0 2 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 13 0 1497.5712 CON__P02768-1;P02768 CON__P02768-1 76 88 ALB Serum albumin yes no 2 0.0295 79.23 By MS/MS 6 0 1 1 21834 0 21834 + 13563 42 14399 34358 24237 24237 1 0 66964 TCVADESHAGCEK DEHVKLVNELTEFAKTCVADESHAGCEKSL AKTCVADESHAGCEKSLHTLFGDELCKVAS K T C E K S 2 0 0 1 2 0 2 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 13 0 1462.5817 CON__P02769 CON__P02769 76 88 yes yes 2 6.0263E-18 227.36 By MS/MS 6 0 1 1 1320200 1320200 0 + 13564 43 14400 34359 24238 24238 1 10295 0 TCVDTYTNR SECQTSVGTLLAKMKTCVDTYTNRLRSKRE LLAKMKTCVDTYTNRLRSKRENVKTGVKPD K T C N R L 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 3 0 1 1 0 0 9 0 1128.487 Q9NR09 Q9NR09 4442 4450 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.0012486 137.9 By MS/MS 1.5 0.5 1 1 2 276840 276840 0 13565 2596 14401 34360;34361 24239 24239 1 13609 0 TCVQEITAHR GSHDCSIRLWNLDSKTCVQEITAHRKKLDE NLDSKTCVQEITAHRKKLDESIYDVAFHSS K T C H R K 1 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 2 0 0 1 0 0 10 0 1213.5874 Q13033;Q9NRL3 Q13033 756 765 STRN3;STRN4 Striatin-3;Striatin-4 no no 3 0.004363 100.69 By MS/MS 4 0 1 1 558220 558220 0 13566 1326;2607 14402 34362 24240 24240 1 15239 0 TCWPTDLEEAK RMSFCVYSILGVVKRTCWPTDLEEAKAGGF VVKRTCWPTDLEEAKAGGFVVGYTSSGNPI R T C A K A 1 0 0 1 1 0 2 0 0 0 1 1 0 0 1 0 2 1 0 0 0 0 11 0 1348.5969 Q9HAV4 Q9HAV4 735 745 XPO5 Exportin-5 yes yes 2 0.027236 82.831 By MS/MS 4 0.816 1 1 1 3 1306900 1306900 0 13567 2546 14403 34363;34364;34365 24241 24241 1 36525 0 TCYNIYLASK QHIEIHEGTVLQAVRTCYNIYLASKNLINQ LQAVRTCYNIYLASKNLINQTTAKATLTQM R T C S K N 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 1 0 2 0 0 0 10 0 1231.5907 Q9Y6D6;Q9Y6D5 Q9Y6D6 177 186 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 0.0052552 106.62 By MS/MS 2 0 1 1 201250 201250 0 13568 3003;3002 14404 34366 24242 24242 1 10003 0 TDAAVSFAK ______________________________ ______________________________ M T D A K D 3 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 9 0 908.46035 P05141 P05141 2 10 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 1;2 0.00017637 150.36 By MS/MS By MS/MS 5.33 2.87 2 2 1 1 1 1 2 4 1 14 1 247350000 246040000 1304900 13569 469 14405 34367;34368;34369;34370;34371;34372;34373;34374;34375;34376;34377;34378;34379;34380;34381 24243;24244;24245;24246;24247;24248;24249;24250;24251;24252;24253 24244 10 17195000 11132000 TDAGFTLR KETVREAEAASIKIRTDAGFTLRWVRKTPW AASIKIRTDAGFTLRWVRKTPWYQ______ R T D L R W 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 0 0 0 8 0 879.44503 P18206 P18206 1118 1125 VCL Vinculin yes yes 2 0.045366 93.162 By MS/MS 4 0 1 1 454670 454670 0 13570 623 14406 34382 24254 24254 1 12412 0 TDAISEEKLR ISNVPILILGNKIDRTDAISEEKLREIFGL NKIDRTDAISEEKLREIFGLYGQTTGKGNV R T D L R E 1 1 0 1 0 0 2 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1160.6037 Q9NR31 Q9NR31 139 148 SAR1A GTP-binding protein SAR1a yes yes 2;3 0.015978 108.43 By MS/MS 9 0 2 2 1385900 1385900 0 13571 2599 14407 34383;34384 24255;24256 24255 2 795370 0 TDASSASSFLDSDELER ELAGRPMKVGHVTERTDASSASSFLDSDEL ASSASSFLDSDELERTGIDLGTTGRLQLMA R T D E R T 2 1 0 3 0 0 2 0 0 0 2 0 0 1 0 5 1 0 0 0 0 0 17 0 1828.7963 Q14498 Q14498 330 346 RBM39 RNA-binding protein 39 yes yes 2 2.3412E-18 199.8 By MS/MS 5.5 0.5 1 1 2 2037200 2037200 0 13572 1433 14408 34385;34386 24257 24257 1 43241 0 TDDIPVWDQEFLK DDPPPPEDDENKEKRTDDIPVWDQEFLKVD KRTDDIPVWDQEFLKVDQGTLFELILAANY R T D L K V 0 0 0 3 0 1 1 0 0 1 1 1 0 1 1 0 1 1 0 1 0 0 13 0 1604.7722 P63208 P63208 82 94 SKP1 S-phase kinase-associated protein 1 yes yes 2 0.017097 99.215 By MS/MS 9.5 0.5 1 1 2 282590 282590 0 13573 1174 14409 34387;34388 24258 24258 1 231720 0 TDEATFSK GDGTLQEVVTGVLRRTDEATFSKIPIGFIP VTGVLRRTDEATFSKIPIGFIPLGETSSLS R T D S K I 1 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 2 0 0 0 0 0 8 0 897.40798 Q53H12 Q53H12 139 146 AGK Acylglycerol kinase, mitochondrial yes yes 2 0.0016587 162.25 By MS/MS 7 0 1 1 1956000 1956000 0 13574 1587 14410 34389 24259 24259 1 34955 0 TDEQALLSSILAK LNGAEPNYHSLPSARTDEQALLSSILAKTA ARTDEQALLSSILAKTASNIIDVSAADSQG R T D A K T 2 0 0 1 0 1 1 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1387.7559 Q6IAA8 Q6IAA8 48 60 LAMTOR1 Ragulator complex protein LAMTOR1 yes yes 2 1.3918E-34 253.97 By MS/MS 9.5 0.5 1 1 2 1563900 1563900 0 13575 1681 14411 34390;34391 24260;24261 24261 2 1620100 0 TDFEEFFLR IKIAALRMYTSCVEKTDFEEFFLRCQMPDT TSCVEKTDFEEFFLRCQMPDTFNSWFLITL K T D L R C 0 1 0 1 0 0 2 0 0 0 1 0 0 3 0 0 1 0 0 0 0 0 9 0 1202.5608 Q9NVA1 Q9NVA1 128 136 UQCC1 Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes yes 2 7.5483E-05 172.21 By MS/MS 9 0 1 1 523270 523270 0 13576 2646 14412 34392 24262 24262 1 300310 0 TDFGIFR LGLSFSAALNAPIEKTDFGIFRM_______ ALNAPIEKTDFGIFRM______________ K T D F R M 0 1 0 1 0 0 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 0 7 0 854.42865 Q9HCC0 Q9HCC0 556 562 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.0085109 158.38 By MS/MS 6 0 1 1 1747100 1747100 0 13577 2559 14413 34393 24263 24263 1 13624 0 TDIARTEYLSNADER TTWSHHLQQANIQFRTDIARTEYLSNADER TDIARTEYLSNADERLRWQASSLPADDLCT R T D E R L 2 2 1 2 0 0 2 0 0 1 1 0 0 0 0 1 2 0 1 0 0 0 15 1 1752.8279 Q14204 Q14204 3545 3559 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0011187 113.65 By MS/MS 1 0 1 1 307940 307940 0 13578 1421 14414 34394 24264 24264 1 15045 0 TDICIPQTK PRKVKKKHKDTEYKKTDICIPQTKGVLEQE DTEYKKTDICIPQTKGVLEQEEKEEKAALE K T D T K G 0 0 0 1 1 1 0 0 0 2 0 1 0 0 1 0 2 0 0 0 0 0 9 0 1074.5379 O14967 O14967 508 516 CLGN Calmegin yes yes 2 0.044745 82.749 By MS/MS 4 0 1 1 376050 376050 0 13579 139 14415 34395 24265 24265 1 10266 0 TDIFGVEETAIGK GLDIESSLKQLAERRTDIFGVEETAIGKKI RRTDIFGVEETAIGKKIGEEEIQKPEEKVT R T D G K K 1 0 0 1 0 0 2 2 0 2 0 1 0 1 0 0 2 0 0 1 0 0 13 0 1378.698 Q15459 Q15459 474 486 SF3A1 Splicing factor 3A subunit 1 yes yes 2 0.00014015 152.69 By MS/MS 4 0 1 1 166950 166950 0 13580 1504 14416 34396 24266 24266 1 4557.7 0 TDIPELELFPR GANLALPRPVIKNSKTDIPELELFPRYLLF KNSKTDIPELELFPRYLLFLRQQPATRTQQ K T D P R Y 0 1 0 1 0 0 2 0 0 1 2 0 0 1 2 0 1 0 0 0 0 0 11 0 1328.6976 Q8NFA0 Q8NFA0 590 600 USP32 Ubiquitin carboxyl-terminal hydrolase 32 yes yes 2 0.0042521 110.87 By MS/MS 3 0 1 1 151790 151790 0 13581 1968 14417 34397 24267 24267 1 3962.6 0 TDITYPAGFMDVISIDK KICMQRFIKIDGKVRTDITYPAGFMDVISI ITYPAGFMDVISIDKTGENFRLIYDTKGRF R T D D K T 1 0 0 3 0 0 0 1 0 3 0 1 1 1 1 1 2 0 1 1 0 0 17 0 1884.9179 P62701 P62701 78 94 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.00015623 130.44 By MS/MS 8 0 1 1 422300 422300 0 13582 1140 14418 34398 24268 24268 891 1 27859 0 TDKLVNER QAESDIMKRQPRNPKTDKLVNERLISMAYG RQPRNPKTDKLVNERLISMAYGQIGMIQAL K T D E R L 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 1 973.51926 P05023;P13637 P05023 841 848 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2;3 0.010077 155.07 By MS/MS 4.29 2.05 2 2 2 3 3 2 2 1 17 186120000 186120000 0 13583 463;575 14419 34399;34400;34401;34402;34403;34404;34405;34406;34407;34408;34409;34410;34411;34412;34413;34414;34415 24269;24270;24271;24272;24273 24271 5 1878000 0 TDKSSASAPDVDDPEAFPALA RGGRGRGGRPNRGSRTDKSSASAPDVDDPE SAPDVDDPEAFPALA_______________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.0082146 92.935 By MS/MS By matching 6 0 2 1 1 4429900 4392100 37811 13584 1949 14420 34416;34417 24274 24274 1 34250 115960 TDKTLVLLMGK KSTGGAPTFNVTVTKTDKTLVLLMGKEGVH TVTKTDKTLVLLMGKEGVHGGLINKKCYEM K T D G K E 0 0 0 1 0 0 0 1 0 0 3 2 1 0 0 0 2 0 0 1 0 0 11 1 1217.7053 P07737 P07737 106 116 PFN1 Profilin-1 yes yes 3 0.00098948 119.34 By MS/MS 10 0 1 1 191750 191750 0 13585 491 14421 34418 24275 24275 284 1 203810 0 TDLAAVPASR ITNGPDADVLIVYAKTDLAAVPASRGITAF IVYAKTDLAAVPASRGITAFIVEKGMPGFS K T D S R G 3 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 0 999.53491 P26440 P26440 214 223 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 2 0.0071596 119.62 By MS/MS 7 0 1 1 3202500 3202500 0 13586 696 14422 34419 24276;24277 24277 2 57230 0 TDLEELSLGPR VKQYEAARLEYDAYRTDLEELSLGPRDAGT DAYRTDLEELSLGPRDAGTRGRLESAQATF R T D P R D 0 1 0 1 0 0 2 1 0 0 3 0 0 0 1 1 1 0 0 0 0 0 11 0 1228.6299 P53365 P53365 240 250 ARFIP2 Arfaptin-2 yes yes 2 4.2876E-07 188.04 By MS/MS 7 0 1 1 1339900 1339900 0 13587 999 14423 34420 24278 24278 1 23944 0 TDLLLEPYNK HIFYYLLSGAGEHLKTDLLLEPYNKYRFLS GEHLKTDLLLEPYNKYRFLSNGHVTIPGQQ K T D N K Y 0 0 1 1 0 0 1 0 0 0 3 1 0 0 1 0 1 0 1 0 0 0 10 0 1204.634 P35579 P35579 290 299 MYH9 Myosin-9 yes yes 2 0.00058809 141.52 By MS/MS 2 0 1 1 498240 498240 0 13588 793 14424 34421 24279 24279 1 24765 0 TDLLQVLLK GNCMEVPNVASSLLKTDLLQVLLKLAGSDT ASSLLKTDLLQVLLKLAGSDTQKTAVQVNA K T D L K L 0 0 0 1 0 1 0 0 0 0 4 1 0 0 0 0 1 0 0 1 0 0 9 0 1041.6434 Q9H892 Q9H892 645 653 TTC12 Tetratricopeptide repeat protein 12 yes yes 2 0.0037286 118.5 By MS/MS 5.5 0.5 1 1 2 220430 220430 0 13589 2524 14425 34422;34423 24280 24280 1 7255.9 0 TDLNPDNLQGGDDLDPNYVLSSR IEDRHGGYKPSDEHKTDLNPDNLQGGDDLD QGGDDLDPNYVLSSRVRTGRSIRGFCLPPH K T D S R V 0 1 3 5 0 1 0 2 0 0 4 0 0 0 2 2 1 0 1 1 0 0 23 0 2517.1619 P12277 P12277 108 130 CKB Creatine kinase B-type yes yes 2 5.1944E-06 112.57 By MS/MS 7 0 1 1 496850 496850 0 13590 565 14426 34424 24281 24281 1 8878.8 0 TDMDNQIVVSDYAQMDR KAKIGLIQFCLSAPKTDMDNQIVVSDYAQM MDNQIVVSDYAQMDRVLREERAYILNLVKQ K T D D R V 1 1 1 4 0 2 0 0 0 1 0 0 2 0 0 1 1 0 1 2 0 0 17 0 1999.8615 P50991 P50991 258 274 CCT4 T-complex protein 1 subunit delta yes yes 2 3.2898E-55 280.5 By MS/MS 6 0 3 3 34025000 34025000 0 13591 956 14427;14428;14429 34425;34426;34427 24282;24283;24284 24284 719;720 3 265320 0 TDNSEVFWNPTPDIK LEGHWDSEVFITDKKTDNSEVFWNPTPDIK TDNSEVFWNPTPDIKQWRLIRHTVKFEEQG K T D I K Q 0 0 2 2 0 0 1 0 0 1 0 1 0 1 2 1 2 1 0 1 0 0 15 0 1761.821 Q9BZF1 Q9BZF1 650 664 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 2 4.0995E-05 138.45 By MS/MS 4 0 1 1 501170 501170 0 13592 2421 14430 34428 24285 24285 1 13681 0 TDPSILGGMIVR KSFLSQGQVLKLEAKTDPSILGGMIVRIGE EAKTDPSILGGMIVRIGEKYVDMSVKTKIQ K T D V R I 0 1 0 1 0 0 0 2 0 2 1 0 1 0 1 1 1 0 0 1 0 0 12 0 1257.6751 P48047 P48047 177 188 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 7.6087E-05 156.83 By MS/MS 8.67 0.471 1 2 3 28565000 28565000 0 13593 900 14431;14432 34429;34430;34431 24286;24287;24288 24286 637 3 16351000 0 TDPSTLTEEEVSK SEIQLARLKKLGINKTDPSTLTEEEVSKFA NKTDPSTLTEEEVSKFARLDIDPSTITWQR K T D S K F 0 0 0 1 0 0 3 0 0 0 1 1 0 0 1 2 3 0 0 1 0 0 13 0 1434.6726 Q6UB35 Q6UB35 548 560 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00078851 155.26 By MS/MS By matching 4.75 0.829 2 1 1 3 1 5287100 4963200 323850 13594 1726 14433 34432;34433;34434;34435 24289 24289 1 122640 676710 TDPTTLTDEEINR SDIQIRRLKRLGIEKTDPTTLTDEEINRFA EKTDPTTLTDEEINRFARLDIDPETITWQR K T D N R F 0 1 1 2 0 0 2 0 0 1 1 0 0 0 1 0 4 0 0 0 0 0 13 0 1503.7053 P11586 P11586 505 517 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 1.13E-11 201.09 By MS/MS 4.5 0.5 1 1 2 10109000 10109000 0 13595 556 14434 34436;34437 24290;24291 24290 2 290260 0 TDQLVSFLR ASFFSKVMGILINRKTDQLVSFLRKKDDFV ILINRKTDQLVSFLRKKDDFVDLLLQHIGT K T D L R K 0 1 0 1 0 1 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 9 0 1077.5819 Q9UPN7 Q9UPN7 136 144 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 2 0.00088749 144.65 By MS/MS 3.5 0.5 1 1 2 363030 363030 0 13596 2851 14435 34438;34439 24292 24292 1 9875.7 0 TDRLEVCR PVPAAAAAAAQKLMRTDRLEVCREYQRGNC AAQKLMRTDRLEVCREYQRGNCNRGENDCR R T D C R E 0 2 0 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 1 1047.5131 Q9NR56 Q9NR56 179 186 MBNL1 Muscleblind-like protein 1 yes yes 3 0.041586 90.709 By MS/MS 7 0 1 1 221300 221300 0 13597 2602 14436 34440 24293 24293 1 3954.6 0 TDSEIALLEGLTVVYK EQKAFEKNIFNKTHRTDSEIALLEGLTVVY DSEIALLEGLTVVYKSSIDLYFYVIGSSYE R T D Y K S 1 0 0 1 0 0 2 1 0 1 3 1 0 0 0 1 2 0 1 2 0 0 16 0 1749.94 P61923 P61923 55 70 COPZ1 Coatomer subunit zeta-1 yes yes 2 0.011176 112.43 By MS/MS 9 0 1 1 50738 50738 0 13598 1107 14437 34441 24294;24295 24294 2 29119 0 TDSFVGGR CYAGRLAGLSAALLRTDSFVGGRWLPAAAT LSAALLRTDSFVGGRWLPAAATFPVQDPAS R T D G R W 0 1 0 1 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 1 0 0 8 0 837.39808 P51649 P51649 61 68 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 2 0.03979 95.352 By MS/MS By matching 6.33 0.471 2 1 2 1 1257300 1252100 5191.3 13599 973 14438 34442;34443;34444 24296 24296 1 12546 15921 TDSPSCEYSR RASMTNLVKMGFPSKTDSPSCEYSRFDFDS GFPSKTDSPSCEYSRFDFDSDEDFNAFFNS K T D S R F 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 3 1 0 1 0 0 0 10 0 1200.4717 Q9HAV4 Q9HAV4 414 423 XPO5 Exportin-5 yes yes 2 0.00092554 126.31 By MS/MS 3 0 1 1 455370 455370 0 13600 2546 14439 34445 24297 24297 1 11888 0 TDSQLQGQVLFR LWTNMAISSVAEFRRTDSQLQGQVLFRHLA FRRTDSQLQGQVLFRHLAGLAELLPESRRQ R T D F R H 0 1 0 1 0 3 0 1 0 0 2 0 0 1 0 1 1 0 0 1 0 0 12 0 1390.7205 Q9NU22 Q9NU22 3130 3141 MDN1 Midasin yes yes 2 2.2847E-25 251.64 By MS/MS 1.5 0.5 1 1 2 1184500 1184500 0 13601 2635 14440 34446;34447 24298;24299 24298 2 57966 0 TDTESELDLISR RMFGIPVVVAVNAFKTDTESELDLISRLSR AFKTDTESELDLISRLSREHGAFDAVKCTH K T D S R L 0 1 0 2 0 0 2 0 0 1 2 0 0 0 0 2 2 0 0 0 0 0 12 0 1377.6624 P11586 P11586 761 772 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 1.4817E-16 221.59 By MS/MS By MS/MS 4 0.707 1 2 1 3 1 17320000 17274000 46346 13602 556 14441 34448;34449;34450;34451 24300;24301;24302;24303 24302 4 485170 96843 TDTGEPMGR QYAWESSAGGSFTVRTDTGEPMGRGTKVIL GSFTVRTDTGEPMGRGTKVILHLKEDQTEY R T D G R G 0 1 0 1 0 0 1 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 9 0 962.41274 P07900 P07900 174 182 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.018767 97.431 By MS/MS 4 0 1 1 469720 469720 0 13603 494 14442 34452 24304 24304 1 12823 0 TDTLEDLFPTTK DALIDSMSLAKKDEKTDTLEDLFPTTKIPN DEKTDTLEDLFPTTKIPNPRFQRLFQCLLH K T D T K I 0 0 0 2 0 0 1 0 0 0 2 1 0 1 1 0 4 0 0 0 0 0 12 0 1379.682 P13010 P13010 470 481 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 7.6444E-11 198.62 By MS/MS 6 0.816 1 1 1 3 1905300 1905300 0 13604 570 14443 34453;34454;34455 24305 24305 1 60526 0 TDTNVLYER DFFPERWFHIVFVLRTDTNVLYERLETRGY IVFVLRTDTNVLYERLETRGYNEKKLTDNI R T D E R L 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 1 0 0 9 0 1109.5353 Q9Y3D8 Q9Y3D8 97 105 AK6 Adenylate kinase isoenzyme 6 yes yes 2 4.6117E-06 179.1 By MS/MS 9.5 0.5 1 1 2 1396900 1396900 0 13605 2934 14444 34456;34457 24306;24307 24306 2 902270 0 TDTRAEIDLVCELAK QLFGVPVVVALNVFKTDTRAEIDLVCELAK TDTRAEIDLVCELAKRAGAFDAVPCYHWSV K T D A K R 2 1 0 2 1 0 2 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 15 1 1732.8665 Q6UB35 Q6UB35 804 818 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2;3 0.014666 110.25 By MS/MS 4.33 0.471 2 1 3 3166700 3166700 0 13606 1726 14445 34458;34459;34460 24308;24309 24308 2 87667 0 TDTVLILCR LLKPISVEGSSKKVKTDTVLILCRKKVENT SSKKVKTDTVLILCRKKVENTRWDYLTQVE K T D C R K 0 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 9 0 1089.5852 Q9HB71 Q9HB71 147 155 CACYBP Calcyclin-binding protein yes yes 2 0.00025413 178.83 By MS/MS 8 0 1 1 6798800 6798800 0 13607 2549 14446 34461 24310 24310 1 448520 0 TDVLTGLSIR QEQEIDGKSLLLMQRTDVLTGLSIRLGPAL LLMQRTDVLTGLSIRLGPALKIYEHHIKVL R T D I R L 0 1 0 1 0 0 0 1 0 1 2 0 0 0 0 1 2 0 0 1 0 0 10 0 1073.6081 Q6SPF0 Q6SPF0 499 508 SAMD1 Atherin yes yes 2 0.0013647 128.28 By MS/MS 5 0 1 1 420120 420120 0 13608 1724 14447 34462 24311 24311 1 17269 0 TDYNASVSVPDSSGPER GAVIGKGGKNIKALRTDYNASVSVPDSSGP YNASVSVPDSSGPERILSISADIETIGEIL R T D E R I 1 1 1 2 0 0 1 1 0 0 0 0 0 0 2 4 1 0 1 2 0 0 17 0 1779.7911 P61978 P61978 70 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 2 4.3069E-33 233.28 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 16211000 16145000 66551 13609 1110 14448 34463;34464;34465 24312;24313 24313 2 129420 204110 TEAGAVGEAGGAEDPGAAAGGSVR LFRHQDPGDPGPGIRTEAGAVGEAGGAEDP GGAEDPGAAAGGSVRGSGAVAEGNRTEAGS R T E V R G 7 1 0 1 0 0 3 7 0 0 0 0 0 0 1 1 1 0 0 2 0 0 24 0 2055.9457 Q8ND04 Q8ND04 94 117 SMG8 Protein SMG8 yes yes 2 1.3052E-58 258.12 By MS/MS 4.5 0.5 1 1 2 1644000 1644000 0 13610 1956 14449 34466;34467 24314 24314 1 47490 0 TEAHKEIHSQQVK QIFMRTCSEAIQQLRTEAHKEIHSQQVKEH LRTEAHKEIHSQQVKEHRTAVLDFIEDYLK R T E V K E 1 0 0 0 0 2 2 0 2 1 0 2 0 0 0 1 1 0 0 1 0 0 13 1 1533.79 Q9P2W9 Q9P2W9 116 128 STX18 Syntaxin-18 yes yes 3 0.0017816 137.09 By MS/MS 7 0 1 1 1921800 1921800 0 13611 2742 14450 34468 24315 24315 1 34344 0 TEALSVIELLLK SITYSLENKTYSSVRTEALSVIELLLKKLE SVRTEALSVIELLLKKLEESKQWECLTSEC R T E L K K 1 0 0 0 0 0 2 0 0 1 4 1 0 0 0 1 1 0 0 1 0 0 12 0 1327.7963 Q5VYK3 Q5VYK3 1785 1796 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.014903 91.549 By MS/MS 6 0 1 1 88404 88404 0 13612 1657 14451 34469 24316 24316 1 689.37 0 TEALTQAFR TAIAGSEIFSLEMSKTEALTQAFRRSIGVR SLEMSKTEALTQAFRRSIGVRIKEETEIIE K T E F R R 2 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 9 0 1035.5349 Q9Y230 Q9Y230 116 124 RUVBL2 RuvB-like 2 yes yes 2 0.00043336 175.91 By MS/MS By matching 6.75 0.829 2 1 1 3 1 48268000 48196000 71351 13613 2864 14452 34470;34471;34472;34473 24317 24317 1 412660 218830 TEAPSATGQASSLLGGR PNGRRLTESYCETWRTEAPSATGQASSLLG APSATGQASSLLGGRLLGQSAASCHHAYIV R T E G R L 3 1 0 0 0 1 1 3 0 0 2 0 0 0 1 3 2 0 0 0 0 0 17 0 1601.8009 P39060 P39060 1711 1727 COL18A1 Collagen alpha-1(XVIII) chain;Endostatin yes yes 2 4.3756E-07 153.14 By MS/MS 3 0 1 1 513700 513700 0 13614 824 14453 34474 24318 24318 1 13410 0 TEAQANQISLPR NLLTKIILEHVSTWRTEAQANQISLPRLVD TWRTEAQANQISLPRLVDLDWRVDIKTSSD R T E P R L 2 1 1 0 0 2 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 12 0 1326.6892 Q9P000 Q9P000 111 122 COMMD9 COMM domain-containing protein 9 yes yes 2 3.5347E-05 169.21 By MS/MS 9 0 1 1 284700 284700 0 13615 2719 14454 34475 24319 24319 1 163390 0 TEAQGITGARPK RPKTEVQVMGGARPKTEAQGITGARPKTDA RPKTEAQGITGARPKTDARAVGGARSKTDA K T E P K T 2 1 0 0 0 1 1 2 0 1 0 1 0 0 1 0 2 0 0 0 0 0 12 1 1227.6571 Q96D09 Q96D09 88 99 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 2 0.00044268 163.84 By MS/MS 4 0 1 1 560970 560970 0 13616 2146 14455 34476 24320 24320 1 15314 0 TEAVASSLYDILAR TGWLDHWGQPHSTIKTEAVASSLYDILARG KTEAVASSLYDILARGASVNLYMFIGGTNF K T E A R G 3 1 0 1 0 0 1 0 0 1 2 0 0 0 0 2 1 0 1 1 0 0 14 0 1507.7882 P16278 P16278 286 299 GLB1 Beta-galactosidase yes yes 2 0.0028347 113.22 By MS/MS 5.5 0.5 1 1 2 498360 498360 0 13617 605 14456 34477;34478 24321;24322 24321 2 7307.8 0 TECYGYALGDATR SNAIYYGNRSLAYLRTECYGYALGDATRAI LRTECYGYALGDATRAIELDKKYIKGYYRR R T E T R A 2 1 0 1 1 0 1 2 0 0 1 0 0 0 0 0 2 0 2 0 0 0 13 0 1475.6351 P53041 P53041 75 87 PPP5C Serine/threonine-protein phosphatase 5 yes yes 2 0.0078778 98.156 By MS/MS 6 0 1 1 1911400 1911400 0 13618 997 14457 34479 24323 24323 1 14905 0 TEDFIIDTLELR RSFLGLTCLMQISTRTEDFIIDTLELRSDM STRTEDFIIDTLELRSDMYILNESLTDPAI R T E L R S 0 1 0 2 0 0 2 0 0 2 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1463.7508 Q01780 Q01780 335 346 EXOSC10 Exosome component 10 yes yes 2 1.0842E-07 192.38 By MS/MS 4.5 0.5 1 1 2 221300 221300 0 13619 1244 14458 34480;34481 24324 24324 1 6353.4 0 TEDGKIYQR AAVVELENYGMPFSRTEDGKIYQRAFGGQS GMPFSRTEDGKIYQRAFGGQSLKFGKGGQA R T E Q R A 0 1 0 1 0 1 1 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 9 1 1108.5513 P31040 P31040 163 171 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 0.013638 129.42 By MS/MS 5 0 1 1 0 0 0 13620 749 14459 34482 24325 24325 1 0 0 TEDIIIKDK DFPDEEEEEEETSVKTEDIIIKDKAKGKKS EETSVKTEDIIIKDKAKGKKSKAAAKAGSS K T E D K A 0 0 0 2 0 0 1 0 0 3 0 2 0 0 0 0 1 0 0 0 0 0 9 1 1073.5968 Q9P2J5 Q9P2J5 131 139 LARS Leucine--tRNA ligase, cytoplasmic yes yes 3 0.018802 92.051 By MS/MS 3 0 1 1 600230 600230 0 13621 2738 14460 34483 24326 24326 1 15669 0 TEDLFENR LSSFPPLPGAAGNLKTEDLFENRLSSLIIG GAAGNLKTEDLFENRLSSLIIGPSKERTLS K T E N R L 0 1 1 1 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 8 0 1022.4669 Q92615 Q92615 546 553 LARP4B La-related protein 4B yes yes 2 0.0043405 139.97 By MS/MS 4.5 0.5 1 1 2 1384900 1384900 0 13622 2067 14461 34484;34485 24327 24327 1 44537 0 TEEALQLYNQIIK IIHGQMAYILQLQGRTEEALQLYNQIIKLK GRTEEALQLYNQIIKLKPTDVGLLAVIANN R T E I K L 1 0 1 0 0 2 2 0 0 2 2 1 0 0 0 0 1 0 1 0 0 0 13 0 1561.8352 O76094 O76094 242 254 SRP72 Signal recognition particle subunit SRP72 yes yes 2 9.6596E-12 203.02 By MS/MS 5 0.816 1 1 1 3 4510200 4510200 0 13623 346 14462 34486;34487;34488 24328;24329;24330 24330 3 123190 0 TEELNKEVASNSELVQSSR AEKNRRDAETWFLSKTEELNKEVASNSELV NKEVASNSELVQSSRSEVTELRRVLQGLEI K T E S R S 1 1 2 0 0 1 4 0 0 0 2 1 0 0 0 4 1 0 0 2 0 0 19 1 2119.0393 CON__P08779;P08779 CON__P08779 312 330 KRT16 Keratin, type I cytoskeletal 16 yes no 3 0.0013095 96.391 By MS/MS By MS/MS 4.5 1.71 1 1 1 1 1 1 1 5 1819200 844620 974570 + 13624 47 14463 34489;34490;34491;34492;34493;34494 24331;24332;24333;24334;24335;24336 24333 6 34717 2108800 TEELNREVATNSELVQSGK AEKNRKDAEEWFFTKTEELNREVATNSELV NREVATNSELVQSGKSEISELRRTMQNLEI K T E G K S 1 1 2 0 0 1 4 1 0 0 2 1 0 0 0 2 2 0 0 2 0 0 19 1 2103.0444 CON__P02533;P02533;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 310 328 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 3 0.00066402 104.84 By matching By MS/MS 3.5 1.12 1 1 1 1 1 3 669200 432200 237000 + 13625 35;54 14464 34495;34496;34497;34498 24337;24338;24339 24337 3 17765 382170 TEFAGDKFKEEK GQTGPYRRPQRLRKRTEFAGDKFKEEKVFE RKRTEFAGDKFKEEKVFEPNEEALGVVLHK R T E E K V 1 0 0 1 0 0 3 1 0 0 0 3 0 2 0 0 1 0 0 0 0 0 12 2 1427.6933 O43615 O43615 211 222 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 1.2363E-55 303.71 By MS/MS By matching 7.25 0.433 3 1 3 1 17776000 17761000 14449 13626 209 14465 34499;34500;34501;34502 24340;24341 24341 2 379680 59317 TEFDVAVDELSLNPGK EWGAFGDNGCLDDFRTEFDVAVDELSLNPG EFDVAVDELSLNPGKQRFEKMISGMYLGEI R T E G K Q 1 0 1 2 0 0 2 1 0 0 2 1 0 1 1 1 1 0 0 2 0 0 16 0 1732.8519 P52789 P52789 723 738 HK2 Hexokinase-2 yes yes 2 1.1945E-28 289.75 By MS/MS 4 0 1 1 1100000 1100000 0 13627 992 14466 34503 24342 24342 1 30030 0 TEFIPSTDPFQK SEKDSNFQNPFKIDRTEFIPSTDPFQKALR IDRTEFIPSTDPFQKALREEEKRRKKEEKR R T E Q K A 0 0 0 1 0 1 1 0 0 1 0 1 0 2 2 1 2 0 0 0 0 0 12 0 1408.6874 Q9H6E4 Q9H6E4 187 198 CCDC134 Coiled-coil domain-containing protein 134 yes yes 2 0.023854 82.417 By MS/MS 8 0 1 1 630320 630320 0 13628 2509 14467 34504 24343 24343 1 41582 0 TEGAFGLYR APEVTMSSLFKHILRTEGAFGLYRGLAPNF FKHILRTEGAFGLYRGLAPNFMKVIPAVSI R T E Y R G 1 1 0 0 0 0 1 2 0 0 1 0 0 1 0 0 1 0 1 0 0 0 9 0 1012.4978 Q6KCM7 Q6KCM7 429 437 SLC25A25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 2 0.0009562 143.11 By MS/MS 7 0.816 1 1 1 3 2171300 2171300 0 13629 1686 14468 34505;34506;34507 24344 24344 1 35535 0 TEGGWISLQDLR EGEWLVRELNLPVDRTEGGWISLQDLRKVQ VDRTEGGWISLQDLRKVQRETARKSQWKKW R T E L R K 0 1 0 1 0 1 1 2 0 1 2 0 0 0 0 1 1 1 0 0 0 0 12 0 1373.6939 P54098 P54098 1015 1026 POLG DNA polymerase subunit gamma-1 yes yes 2 0.0013056 129.84 By MS/MS 3 0 1 1 177560 177560 0 13630 1011 14469 34508 24345 24345 1 4635.2 0 TEGISTSDIITR YKHIKEAGMFAPTQRTEGISTSDIITRIVR TQRTEGISTSDIITRIVRDYDVYARRNLQR R T E T R I 0 1 0 1 0 0 1 1 0 3 0 0 0 0 0 2 3 0 0 0 0 0 12 0 1291.662 P49585;Q9Y5K3 P49585 197 208 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B yes no 2 0.0079035 99.343 By MS/MS 7 0 1 1 1482300 1482300 0 13631 920 14470 34509 24346 24346 1 26489 0 TEGSLEDWDIAVQK DYPEHVCEVLLTMERTEGSLEDWDIAVQKT RTEGSLEDWDIAVQKTETRLARVNEQRMKA R T E Q K T 1 0 0 2 0 1 2 1 0 1 1 1 0 0 0 1 1 1 0 1 0 0 14 0 1589.7573 Q15020 Q15020 555 568 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 2 9.5163E-19 262.07 By MS/MS 4 0.816 1 1 1 3 1344800 1344800 0 13632 1463 14471 34510;34511;34512 24347 24347 1 36952 0 TEHAEFLHCK IVTRRPLILQLIFSKTEHAEFLHCKSKKFT LIFSKTEHAEFLHCKSKKFTDFDEVRQEIE K T E C K S 1 0 0 0 1 0 2 0 2 0 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1270.5765 P50570 P50570 78 87 DNM2 Dynamin-2 yes yes 3 0.023732 76.943 By MS/MS 4 0 1 1 310340 310340 0 13633 949 14472 34513 24348 24348 1 8471.8 0 TEIIILATR EDGYSGVEVRVTPTRTEIIILATRTQNVLG RVTPTRTEIIILATRTQNVLGEKGRRIREL R T E T R T 1 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 2 0 0 0 0 0 9 0 1028.623 P23396 P23396 46 54 RPS3 40S ribosomal protein S3 yes yes 2 2.2663E-07 195.05 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 5267000 5151700 115320 13634 668 14473 34514;34515;34516;34517 24349;24350 24350 2 516920 983820 TEILAVNVDSK DCFQRTPKKLCIPEKTEILAVNVDSKGVHA IPEKTEILAVNVDSKGVHAVLKTGNWVRYC K T E S K G 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 2 0 0 11 0 1187.6398 O95071 O95071 744 754 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.001878 121.9 By MS/MS 1 0 1 1 151520 151520 0 13635 364 14474 34518 24351 24351 1 7402.8 0 TEILPPFFK KQCCGTDGVEANYIKTEILPPFFKHFWQHR EANYIKTEILPPFFKHFWQHRMALDRRNYR K T E F K H 0 0 0 0 0 0 1 0 0 1 1 1 0 2 2 0 1 0 0 0 0 0 9 0 1090.6063 O75533 O75533 808 816 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.049302 81.784 By MS/MS 4 0.816 1 1 1 3 2035500 2035500 0 13636 315 14475 34519;34520;34521 24352 24352 1 54293 0 TEISDKITSELVSK EPDDGSNDVVDLLPRTEISDKITSELVSKI RTEISDKITSELVSKIGDKNWKIRKEGLDE R T E S K I 0 0 0 1 0 0 2 0 0 2 1 2 0 0 0 3 2 0 0 1 0 0 14 1 1548.8247 Q14008 Q14008 855 868 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00093883 120.84 By MS/MS 3 0.816 1 1 1 3 1536900 1536900 0 13637 1405 14476 34522;34523;34524 24353 24353 0 52137 0 TEIVFTGEKEQLAQAVAR ETGTRINIPPPSVNRTEIVFTGEKEQLAQA VFTGEKEQLAQAVARIKKIYEEKKKKTTTI R T E A R I 3 1 0 0 0 2 3 1 0 1 1 1 0 1 0 0 2 0 0 2 0 0 18 1 1989.0531 Q00341 Q00341 266 283 HDLBP Vigilin yes yes 2;3 3.0663E-69 307.77 By MS/MS 3.33 0.471 2 1 3 6322300 6322300 0 13638 1231 14477 34525;34526;34527 24354;24355 24355 2 165320 0 TELAEPIAIR ADFAPEVAWVTRSGKTELAEPIAIRPTSET TRSGKTELAEPIAIRPTSETVMYPAYAKWV K T E I R P 2 1 0 0 0 0 2 0 0 2 1 0 0 0 1 0 1 0 0 0 0 0 10 0 1111.6237 P07814 P07814 1110 1119 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.00069217 137.13 By MS/MS 3.5 0.5 1 1 2 901320 901320 0 13639 493 14478 34528;34529 24356 24356 1 23702 0 TELAEPIAIRPTSETVMYPAYAK ADFAPEVAWVTRSGKTELAEPIAIRPTSET IRPTSETVMYPAYAKWVQSHRDLPIKLNQW K T E A K W 4 1 0 0 0 0 3 0 0 2 1 1 1 0 3 1 3 0 2 1 0 0 23 1 2550.304 P07814 P07814 1110 1132 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.0059184 62.362 By MS/MS 3.5 0.5 1 1 2 9169300 9169300 0 13640 493 14479 34530;34531 24357 24357 290 1 240200 0 TELLTEALR SGKKSETLKFSTEHRTELLTEALRFRTDFS FSTEHRTELLTEALRFRTDFSEGKITGRRY R T E L R F 1 1 0 0 0 0 2 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 9 0 1044.5815 O75165 O75165 91 99 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0013205 137.13 By MS/MS 2.5 0.5 1 1 2 306710 306710 0 13641 287 14480 34532;34533 24358 24358 1 12363 0 TELPVTENVQTIPPPYVVR STFNLEGLFSLIQQKTELPVTENVQTIPPP VTENVQTIPPPYVVRTILVYSRPPCQPQFS K T E V R T 0 1 1 0 0 1 2 0 0 1 1 0 0 0 4 0 3 0 1 4 0 0 19 0 2151.1576 Q9NWV8 Q9NWV8 194 212 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 2 0.0049665 83.877 By MS/MS 7 0 1 1 596010 596010 0 13642 2672 14481 34534 24359 24359 1 10651 0 TEMPCQALVR ACMEEFQKAVELMDRTEMPCQALVRMLAKK ELMDRTEMPCQALVRMLAKKPGWKETNFQV R T E V R M 1 1 0 0 1 1 1 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 10 0 1203.574 Q14008 Q14008 633 642 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.029605 85.676 By MS/MS 2 0 1 1 212040 212040 0 13643 1405 14482 34535 24360 24360 1 10539 0 TEMSEVLTEILR LTDKVTDLLGGLFSKTEMSEVLTEILRVDP FSKTEMSEVLTEILRVDPAFDKDRFLKQCE K T E L R V 0 1 0 0 0 0 3 0 0 1 2 0 1 0 0 1 2 0 0 1 0 0 12 0 1419.7279 O43615 O43615 294 305 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 4.5098E-25 250.92 By MS/MS 7.17 0.687 1 3 2 6 5597300 5597300 0 13644 209 14483;14484 34536;34537;34538;34539;34540;34541 24361;24362;24363;24364;24365;24366;24367 24365 127 7 107100 0 TENCLSSCVDR WDKCVEKPGNRLDSRTENCLSSCVDRFIDT LDSRTENCLSSCVDRFIDTTLAITSRFAQI R T E D R F 0 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1339.5496 Q9Y5J9 Q9Y5J9 52 62 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 2 1.0229E-06 177.57 By MS/MS 10 0 1 1 333700 333700 0 13645 2970 14485 34542 24368 24368 1 354680 0 TENPLILIDEVDK GAMPGKIIQCLKKTKTENPLILIDEVDKIG TKTENPLILIDEVDKIGRGYQGDPSSALLE K T E D K I 0 0 1 2 0 0 2 0 0 2 2 1 0 0 1 0 1 0 0 1 0 0 13 0 1497.7926 P36776 P36776 582 594 LONP1 Lon protease homolog, mitochondrial yes yes 2 3.9129E-05 177.81 By MS/MS 4.5 0.5 1 1 2 1470700 1470700 0 13646 809 14486 34543;34544 24369 24369 1 41424 0 TEPELLVAHAYTR PAMQRYVKRLHEVGRTEPELLVAHAYTRYL GRTEPELLVAHAYTRYLGDLSGGQVLKKIA R T E T R Y 2 1 0 0 0 0 2 0 1 0 2 0 0 0 1 0 2 0 1 1 0 0 13 0 1498.778 P09601 P09601 124 136 HMOX1 Heme oxygenase 1 yes yes 2 0.017044 95.094 By MS/MS 8 0 1 1 680340 680340 0 13647 517 14487 34545 24370 24370 1 44882 0 TEPINTTYSYTDFQK CCCGWLTKTVKETTRTEPINTTYSYTDFQK TEPINTTYSYTDFQKAVNKLLTASL_____ R T E Q K A 0 0 1 1 0 1 1 0 0 1 0 1 0 1 1 1 4 0 2 0 0 0 15 0 1806.8312 Q9NXF7 Q9NXF7 192 206 DCAF16 DDB1- and CUL4-associated factor 16 yes yes 2 0.0042436 107.17 By MS/MS 9 0 1 1 379930 379930 0 13648 2687 14488 34546 24371 24371 1 218040 0 TEPSVFTASSSNSELIR RKHNTGTDFSNSSTKTEPSVFTASSSNSEL PSVFTASSSNSELIRIAPGVVTMRDGRQLD K T E I R I 1 1 1 0 0 0 2 0 0 1 1 0 0 1 1 5 2 0 0 1 0 0 17 0 1823.8901 Q96JH7 Q96JH7 1067 1083 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 8.7373E-14 185.66 By MS/MS 3.5 0.5 1 1 2 1680200 1680200 0 13649 2209 14489 34547;34548 24372 24372 1 44025 0 TEPTAQQNLALQLAEK MASLDQPTQTVVMHRTEPTAQQNLALQLAE EPTAQQNLALQLAEKLGSLVENNERVFDHK R T E E K L 3 0 1 0 0 3 2 0 0 0 3 1 0 0 1 0 2 0 0 0 0 0 16 0 1753.921 Q99613;B5ME19 Q99613 847 862 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 3.4528E-39 267.77 By MS/MS By MS/MS 5.15 2.6 1 1 1 4 1 1 1 1 1 1 11 2 55184000 54741000 442310 13650 2275 14490 34549;34550;34551;34552;34553;34554;34555;34556;34557;34558;34559;34560;34561 24373;24374;24375;24376;24377;24378;24379;24380;24381 24380 9 1736500 924240 TEQAISFAK ______________________________ ______________________________ M T E A K D 2 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 9 0 993.51311 P12236 P12236 2 10 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 2 0.0023902 112.71 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 86876000 86876000 0 13651 563 14491 34562;34563;34564;34565;34566;34567;34568;34569;34570;34571 24382;24383;24384;24385;24386;24387;24388;24389;24390 24383 9 7782000 0 TEQGPQVDETQFK ARAKSRVVGNPFDSKTEQGPQVDETQFKKI SKTEQGPQVDETQFKKILGYINTGKQEGAK K T E F K K 0 0 0 1 0 3 2 1 0 0 0 1 0 1 1 0 2 0 0 1 0 0 13 0 1505.6998 P05091 P05091 356 368 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 9.1576E-08 187.78 By MS/MS By matching 6.33 0.471 2 1 2 1 4462600 4442400 20118 13652 467 14492 34572;34573;34574 24391 24391 1 38247 61699 TESAVSQMQSVIELGR YLMLPRVREELIDKKTESAVSQMQSVIELG ESAVSQMQSVIELGRVIRDRKTIPIKYPLK K T E G R V 1 1 0 0 0 2 2 1 0 1 1 0 1 0 0 3 1 0 0 2 0 0 16 0 1733.8618 P41252 P41252 818 833 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 9.3857E-78 320.01 By MS/MS By matching 3.25 0.433 3 1 3 1 3484500 3443700 40749 13653 840 14493;14494 34575;34576;34577;34578 24392;24393 24392 596 2 90250 58402 TESEPGQQPMELENK NKLLKGKARGHFQGKTESEPGQQPMELENK TESEPGQQPMELENKAAVPLGGFLCNVADK K T E N K A 0 0 1 0 0 2 4 1 0 0 1 1 1 0 2 1 1 0 0 0 0 0 15 0 1715.7672 Q7L8L6 Q7L8L6 646 660 FASTKD5 FAST kinase domain-containing protein 5 yes yes 2 1.2091E-20 224.25 By MS/MS 5 0 1 1 900700 900700 0 13654 1770 14495 34579 24394 24394 1 37022 0 TESFQNAQAGSNPK RNSMDSVDSCCSLKKTESFQNAQAGSNPKK KTESFQNAQAGSNPKKVDLIIWEIEVPKHL K T E P K K 2 0 2 0 0 2 1 1 0 0 0 1 0 1 1 2 1 0 0 0 0 0 14 0 1477.6797 Q92667 Q92667 590 603 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 6.8358E-06 207.95 By MS/MS 3 0 1 1 541650 541650 0 13655 2074 14496 34580 24395 24395 1 14140 0 TESPATAAETASEELDNR DGASSDAEPEPPSGRTESPATAAETASEEL PATAAETASEELDNRSLEEILNSIPPPPPP R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 Q9NTJ3 Q9NTJ3 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 6.2185E-56 286.53 By MS/MS 3 0 1 1 1105600 1105600 0 13656 2630 14497 34581 24396 24396 1 28862 0 TESPVLTSSCR LLAAGVVSAMVCMVKTESPVLTSSCRELLS CMVKTESPVLTSSCRELLSRVFLALVEEVE K T E C R E 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 3 2 0 0 1 0 0 11 0 1235.5816 Q9H3U1 Q9H3U1 654 664 UNC45A Protein unc-45 homolog A yes yes 2 0.0045982 109.42 By MS/MS 4 0 1 1 1933400 1933400 0 13657 2493 14498 34582 24397 24397 1 52780 0 TESSSAQQVAVSR QLNSTKKPPKKANEKTESSSAQQVAVSRLS EKTESSSAQQVAVSRLSASSSSSDSSSSSS K T E S R L 2 1 0 0 0 2 1 0 0 0 0 0 0 0 0 4 1 0 0 2 0 0 13 0 1348.6583 P25440 P25440 761 773 BRD2 Bromodomain-containing protein 2 yes yes 2 0.00010721 147.24 By MS/MS 4 0 1 1 504300 504300 0 13658 685 14499 34583 24398 24398 1 13767 0 TESTPITAVK LKSVPLATAPMAEQRTESTPITAVKQPEKV MAEQRTESTPITAVKQPEKVAATRQEIFQE R T E V K Q 1 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 3 0 0 1 0 0 10 0 1045.5655 Q9Y678 Q9Y678 591 600 COPG1 Coatomer subunit gamma-1 yes yes 2 0.018874 93.143 By MS/MS 4 0 1 1 2184900 2184900 0 13659 2996 14500 34584 24399 24399 1 59644 0 TESTPITAVKQPEK LKSVPLATAPMAEQRTESTPITAVKQPEKV RTESTPITAVKQPEKVAATRQEIFQEQLAA R T E E K V 1 0 0 0 0 1 2 0 0 1 0 2 0 0 2 1 3 0 0 1 0 0 14 1 1527.8144 Q9Y678 Q9Y678 591 604 COPG1 Coatomer subunit gamma-1 yes yes 3 0.041214 60.55 By MS/MS By matching 4.33 0.471 2 1 2 1 3175100 3129600 45479 13660 2996 14501 34585;34586;34587 24400 24400 1 92253 95032 TETPIVSK HDVEINKIISTTASKTETPIVSKSLSSSLD ISTTASKTETPIVSKSLSSSLDDTEVKKVM K T E S K S 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 2 0 0 1 0 0 8 0 873.48075 O95292 O95292 148 155 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.021256 105.14 By MS/MS 8.5 0.5 1 1 2 1941100 1941100 0 13661 381 14502 34588;34589 24401 24401 1 167850 0 TETPPPLASLNVSK INLQYVSEVEIINDRTETPPPLASLNVSKL RTETPPPLASLNVSKLASKARTEKEEKLSQ R T E S K L 1 0 1 0 0 0 1 0 0 0 2 1 0 0 3 2 2 0 0 1 0 0 14 0 1452.7824 Q3MHD2 Q3MHD2 73 86 LSM12 Protein LSM12 homolog yes yes 2 0.01349 89.189 By MS/MS 9 0 1 1 1287600 1287600 0 13662 1568 14503 34590 24402 24402 1 738980 0 TETTVTRHEADSSPR GIVEERRTVVDSEGRTETTVTRHEADSSPR TETTVTRHEADSSPRGDPESPRPPALDDAF R T E P R G 1 2 0 1 0 0 2 0 1 0 0 0 0 0 1 2 4 0 0 1 0 0 15 1 1685.7969 O00165 O00165 236 250 HAX1 HCLS1-associated protein X-1 yes yes 3 0.0038472 96.707 By MS/MS 8 0 1 1 1186600 1186600 0 13663 73 14504 34591 24403 24403 1 78282 0 TETVTSFR HDVGAYMLMYKGANRTETVTSFRKRESKVP MYKGANRTETVTSFRKRESKVPADLLKRAF R T E F R K 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 3 0 0 1 0 0 8 0 939.46616 P78527 P78527 3865 3872 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0013829 166.68 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 11476000 11476000 0 13664 1197 14505 34592;34593;34594;34595;34596;34597;34598;34599 24404;24405;24406;24407 24405 4 433340 0 TEVIPPLIENR LLSGGNTLHLVSTTKTEVIPPLIENRQSWS STTKTEVIPPLIENRQSWSVCKQVFPGLNY K T E N R Q 0 1 1 0 0 0 2 0 0 2 1 0 0 0 2 0 1 0 0 1 0 0 11 0 1279.7136 P04114 P04114 950 960 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 0.0033885 114.5 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 9598200 9598200 0 13665 445 14506 34600;34601;34602;34603;34604;34605;34606;34607 24408;24409;24410 24410 3 258160 0 TEVIQLEDTLAQVR EHMESDELGLQKKLRTEVIQLEDTLAQVRK RTEVIQLEDTLAQVRKEYEMLRIEFEQNLA R T E V R K 1 1 0 1 0 2 2 0 0 1 2 0 0 0 0 0 2 0 0 2 0 0 14 0 1613.8625 O75150;Q5VTR2 O75150 443 456 RNF40;RNF20 E3 ubiquitin-protein ligase BRE1B;E3 ubiquitin-protein ligase BRE1A no no 2 2.9244E-36 270.02 By MS/MS 3.5 0.5 1 1 2 922280 922280 0 13666 283;1649 14507 34608;34609 24411;24412 24411 2 24611 0 TEVLMENFRR CPMVGSEVYSTEIKKTEVLMENFRRAIGLR TEIKKTEVLMENFRRAIGLRIKETKEVYEG K T E R R A 0 2 1 0 0 0 2 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 10 1 1293.65 Q9Y265 Q9Y265 109 118 RUVBL1 RuvB-like 1 yes yes 2 0.013126 112.41 By MS/MS 6 0 1 1 2402800 2402800 0 13667 2870 14508 34610 24413 24413 1 18737 0 TEVLSEDLLQIER RMKQLANQTVGRAEKTEVLSEDLLQIERRL EKTEVLSEDLLQIERRLDTVRSICHHSHKR K T E E R R 0 1 0 1 0 1 3 0 0 1 3 0 0 0 0 1 1 0 0 1 0 0 13 0 1543.8094 Q68EM7 Q68EM7 22 34 ARHGAP17 Rho GTPase-activating protein 17 yes yes 2 2.5749E-12 211.37 By MS/MS 3.5 0.5 1 1 2 670490 670490 0 13668 1675 14509 34611;34612 24414 24414 1 18076 0 TEVNSGFFYK DAYILTCNVSLEYEKTEVNSGFFYKSAEER LEYEKTEVNSGFFYKSAEEREKLVKAERKF K T E Y K S 0 0 1 0 0 0 1 1 0 0 0 1 0 2 0 1 1 0 1 1 0 0 10 0 1190.5608 P40227;Q92526 P40227 242 251 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 2 1.472E-10 220.39 By MS/MS By matching 6.11 2.69 1 1 1 2 1 1 1 1 8 1 111840000 111760000 77230 13669 828 14510 34613;34614;34615;34616;34617;34618;34619;34620;34621 24415;24416;24417;24418;24419;24420 24418 6 1245500 236860 TEVVSLLLDR TNRNTALTLACFQGRTEVVSLLLDRKANVE CFQGRTEVVSLLLDRKANVEHRAKTGLTPL R T E D R K 0 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 2 0 0 10 0 1143.6499 O75179 O75179 1265 1274 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 2 0.0049402 145.46 By MS/MS 2 1 1 1 2 33974 33974 0 13670 290 14511 34622;34623 24421;24422 24422 2 1659.9 0 TEWETAAPAVAETPDIK ______________________________ WETAAPAVAETPDIKLFGKWSTDDVQINDI M T E I K L 4 0 0 1 0 0 3 0 0 1 0 1 0 0 2 0 3 1 0 1 0 0 17 0 1827.8891 P46782 P46782 2 18 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 1.3984E-25 225.33 By MS/MS By MS/MS 9 0 3 2 1 8517000 8115100 401870 13671 888 14512 34624;34625;34626 24423;24424;24425 24424 3 4657300 4331100 TEWETAAPAVAETPDIKLFGK ______________________________ APAVAETPDIKLFGKWSTDDVQINDISLQD M T E G K W 4 0 0 1 0 0 3 1 0 1 1 2 0 1 2 0 3 1 0 1 0 0 21 1 2273.158 P46782 P46782 2 22 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.0010298 124.07 By MS/MS 9 0 1 1 488040 488040 0 13672 888 14513 34627 24426 24426 1 280090 0 TEYLSNADER HLQQANIQFRTDIARTEYLSNADERLRWQA TDIARTEYLSNADERLRWQASSLPADDLCT R T E E R L 1 1 1 1 0 0 2 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1196.5309 Q14204 Q14204 3550 3559 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.0424E-10 198.61 By MS/MS By matching 1.33 0.471 2 1 2 1 2726000 2679000 46990 13673 1421 14514 34628;34629;34630 24427;24428 24427 2 131540 46990 TFANYSTCDR GITRKRFFRELTELKTFANYSTCDRSNLAD LTELKTFANYSTCDRSNLADWLGSLDPRFR K T F D R S 1 1 1 1 1 0 0 0 0 0 0 0 0 1 0 1 2 0 1 0 0 0 10 0 1233.5084 Q6SZW1 Q6SZW1 475 484 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.026073 88.134 By MS/MS 5 0 1 1 507290 507290 0 13674 1725 14515 34631 24429 24429 1 20852 0 TFAPEEISAMVLTK TKPYIQVDIGGGQTKTFAPEEISAMVLTKM KTFAPEEISAMVLTKMKETAEAYLGKKVTH K T F T K M 2 0 0 0 0 0 2 0 0 1 1 1 1 1 1 1 2 0 0 1 0 0 14 0 1535.7905 P11021 P11021 139 152 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 4.3661E-06 171.49 By MS/MS 4.43 0.728 1 2 4 7 10191000 10191000 0 13675 545 14516;14517 34632;34633;34634;34635;34636;34637;34638 24430;24431;24432;24433;24434 24430 334 5 414570 0 TFCNCFVGQAGQK LNPKGKPANQLLALRTFCNCFVGQAGQKLM LRTFCNCFVGQAGQKLMMSQRESLMSHAIE R T F Q K L 1 0 1 0 2 2 0 2 0 0 0 1 0 2 0 0 1 0 0 1 0 0 13 0 1515.6599 Q9Y263 Q9Y263 662 674 PLAA Phospholipase A-2-activating protein yes yes 2 1.2471E-05 172.27 By MS/MS 1 0 1 1 143230 143230 0 13676 2869 14518 34639 24435 24435 1 6998.1 0 TFCQLILDPIFK FSKSATSPEGKKLPRTFCQLILDPIFKVFD LPRTFCQLILDPIFKVFDAIMNFKKEETAK R T F F K V 0 0 0 1 1 1 0 0 0 2 2 1 0 2 1 0 1 0 0 0 0 0 12 0 1493.7952 P13639 P13639 288 299 EEF2 Elongation factor 2 yes yes 2 7.8036E-08 193.28 By MS/MS 5 1 1 1 2 2057600 2057600 0 13677 576 14519 34640;34641 24436;24437 24437 2 21988 0 TFDATNPLNLCVK WAVGCVIFELLTLKRTFDATNPLNLCVKIV KRTFDATNPLNLCVKIVQGIRAMEVDSSQY R T F V K I 1 0 2 1 1 0 0 0 0 0 2 1 0 1 1 0 2 0 0 1 0 0 13 0 1491.7392 Q8TD19 Q8TD19 250 262 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 3.4554E-25 236.77 By MS/MS 4 0 1 1 579750 579750 0 13678 1999 14520 34642 24438 24438 1 15827 0 TFDEIASGFR FFIFTYFKVPETKGRTFDEIASGFRQGGAS ETKGRTFDEIASGFRQGGASQSDKTPEELF R T F F R Q 1 1 0 1 0 0 1 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 10 0 1141.5404 P11166 P11166 459 468 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 yes yes 2 0.00015134 182.76 By MS/MS 2.5 1.12 1 1 1 1 4 2745100 2745100 0 13679 547 14521 34643;34644;34645;34646 24439;24440;24441 24439 3 116720 0 TFDQLTPEESKER FDYDHDAFLGAEEAKTFDQLTPEESKERLG AKTFDQLTPEESKERLGKIVSKIDGDKDGF K T F E R L 0 1 0 1 0 1 3 0 0 0 1 1 0 1 1 1 2 0 0 0 0 0 13 1 1578.7526 O43852 O43852 60 72 CALU Calumenin yes yes 2;3 2.4146E-24 270.67 By MS/MS 6.67 0.471 1 2 3 8030400 8030400 0 13680 231 14522 34647;34648;34649 24442;24443 24442 2 134150 0 TFDTFCPLGPALVTK DWQMRRNGKQWLLGKTFDTFCPLGPALVTK TFDTFCPLGPALVTKDSVADPHNLKICCRV K T F T K D 1 0 0 1 1 0 0 1 0 0 2 1 0 2 2 0 3 0 0 1 0 0 15 0 1665.8436 Q96GK7;Q6P2I3 Q96GK7 210 224 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 2 3.8734E-07 188.91 By MS/MS 8 0 1 1 413450 413450 0 13681 2184 14523 34650 24444 24444 1 27275 0 TFEGNLTTK WFVDDTNVYRVTIHKTFEGNLTTKPINGAI RVTIHKTFEGNLTTKPINGAIFIFNPRTGQ K T F T K P 0 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 3 0 0 0 0 0 9 0 1009.508 Q6P2Q9 Q6P2Q9 1793 1801 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.05385 92.239 By MS/MS 2 0 1 1 182590 182590 0 13682 1706 14524 34651 24445 24445 1 9075.5 0 TFEVCDLPVR GSVCVWNHETQTLVKTFEVCDLPVRAAKFV QTLVKTFEVCDLPVRAAKFVARKNWVVTGA K T F V R A 0 1 0 1 1 0 1 0 0 0 1 0 0 1 1 0 1 0 0 2 0 0 10 0 1234.6016 P35606 P35606 52 61 COPB2 Coatomer subunit beta yes yes 2 3.547E-05 172.94 By MS/MS 2.5 1.12 1 1 1 1 4 7113000 7113000 0 13683 795 14525 34652;34653;34654;34655 24446;24447;24448;24449 24446 4 290070 0 TFEVTPIR DSKEEKYVAKELAVRTFEVTPIRAKDLEFG AKELAVRTFEVTPIRAKDLEFGGVPGVFLI R T F I R A 0 1 0 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 0 1 0 0 8 0 961.52328 Q14739 Q14739 196 203 LBR Lamin-B receptor yes yes 2 0.041547 94.662 By MS/MS By matching 4.62 2.34 1 1 1 1 2 1 1 7 1 8478300 8415600 62678 13684 1445 14526 34656;34657;34658;34659;34660;34661;34662;34663 24450;24451 24451 2 229350 192230 TFFEELAVEDK DKVVKKGKKDKKIKKTFFEELAVEDKQAGE KIKKTFFEELAVEDKQAGEEEKVLKEKEQQ K T F D K Q 1 0 0 1 0 0 3 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 11 0 1326.6343 Q8NE71 Q8NE71 40 50 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 2 1.0109E-06 177.78 By MS/MS 4 0 1 1 258770 258770 0 13685 1963 14527 34664 24452 24452 1 7064 0 TFIAIKPDGVQR ______________________________ LERTFIAIKPDGVQRGLVGEIIKRFEQKGF R T F Q R G 1 1 0 1 0 1 0 1 0 2 0 1 0 1 1 0 1 0 0 1 0 0 12 1 1343.7561 P15531;P22392 P22392 7 18 NME1;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase B no no 2 0.032465 123.96 By MS/MS 9.5 0.5 1 1 2 3569900 3569900 0 13686 659;599 14528 34665;34666 24453 24453 1 3532400 0 TFLAQHASL LVPDSVKKELLQRIRTFLAQHASL______ LLQRIRTFLAQHASL_______________ R T F S L - 2 0 0 0 0 1 0 0 1 0 2 0 0 1 0 1 1 0 0 0 0 0 9 0 986.51853 Q9NPA8 Q9NPA8 93 101 ENY2 Transcription and mRNA export factor ENY2 yes yes 2 0.0018325 131.62 By MS/MS 10 0 1 1 183440 183440 0 13687 2580 14529 34667 24454 24454 1 194980 0 TFLQDLAR ______________________________ ______________________________ K T F A R G 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 962.51853 O14681 O14681 7 14 EI24 Etoposide-induced protein 2.4 homolog yes yes 2 0.0016587 162.25 By MS/MS 3.67 3.09 1 1 1 3 1557600 1557600 0 13688 121 14530 34668;34669;34670 24455;24456 24455 2 91062 0 TFLQTVSSEK RVQFCPFEKNVESTRTFLQTVSSEKVRSTN VESTRTFLQTVSSEKVRSTNLNCSVIADVR R T F E K V 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 2 2 0 0 1 0 0 10 0 1138.587 Q96EL3 Q96EL3 32 41 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 1.5782E-10 202.2 By MS/MS By matching 10 0 2 1 1 8882800 8827000 55785 13689 2163 14531 34671;34672 24457 24457 1 9382100 1430800 TFLVDPNLDLSIR GRYVSAQPLAGRQSRTFLVDPNLDLSIREL SRTFLVDPNLDLSIRELVHRILPVAASYSA R T F I R E 0 1 1 2 0 0 0 0 0 1 3 0 0 1 1 1 1 0 0 1 0 0 13 0 1501.814 Q9BSJ2 Q9BSJ2 245 257 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00030376 142.97 By MS/MS 4 0 1 1 607320 607320 0 13690 2338 14532 34673 24458 24458 1 16579 0 TFLVGER VRRILGLLDAYLKTRTFLVGERVTLADITV LDAYLKTRTFLVGERVTLADITVVCTLLWL R T F E R V 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7 0 820.4443 P26641 P26641 150 156 EEF1G Elongation factor 1-gamma yes yes 2 0.018801 129.68 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 66305000 66255000 50486 13691 700 14533 34674;34675;34676;34677;34678 24459;24460 24459 2 889120 154840 TFNLPLLMLGGGGYTIR NLTVKGHAKCVEVVKTFNLPLLMLGGGGYT NLPLLMLGGGGYTIRNVARCWTYETAVALD K T F I R N 0 1 1 0 0 0 0 4 0 1 4 0 1 1 1 0 2 0 1 0 0 0 17 0 1821.9811 Q92769 Q92769 291 307 HDAC2 Histone deacetylase 2 yes yes 2 0.0059171 95.195 By MS/MS 6 0 1 1 189460 189460 0 13692 2078 14534 34679 24461 24461 1361 1 1477.4 0 TFNTSTGGLLLPSDTK KLYRETNEPVKTKTRTFNTSTGGLLLPSDT FNTSTGGLLLPSDTKRSQIYGSRQIILEKE R T F T K R 0 0 1 1 0 0 0 2 0 0 3 1 0 1 1 2 4 0 0 0 0 0 16 0 1650.8465 P12956 P12956 302 317 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 3.6111E-10 183.28 By MS/MS 5 0 1 1 1370900 1370900 0 13693 569 14535 34680 24462 24462 1 56350 0 TFNTSTGGLLLPSDTKR KLYRETNEPVKTKTRTFNTSTGGLLLPSDT NTSTGGLLLPSDTKRSQIYGSRQIILEKEE R T F K R S 0 1 1 1 0 0 0 2 0 0 3 1 0 1 1 2 4 0 0 0 0 0 17 1 1806.9476 P12956 P12956 302 318 XRCC6 X-ray repair cross-complementing protein 6 yes yes 2 0.0045508 138.31 By MS/MS 5 0 1 1 1407000 1407000 0 13694 569 14536 34681 24463 24463 1 57833 0 TFQPLSQSLLAE KSHTLLLNKRMVSRRTFQPLSQSLLAE___ SRRTFQPLSQSLLAE_______________ R T F A E - 1 0 0 0 0 2 1 0 0 0 3 0 0 1 1 2 1 0 0 0 0 0 12 0 1332.6925 Q8WV60 Q8WV60 377 388 PTCD2 Pentatricopeptide repeat-containing protein 2, mitochondrial yes yes 2 0.0037922 112.15 By MS/MS 7.5 0.5 1 1 2 432010 432010 0 13695 2024 14537 34682;34683 24464 24464 1 26029 0 TFSEACLMVR VFPHGLPPRFVMQVKTFSEACLMVRKPALE VMQVKTFSEACLMVRKPALELLHYLKNTSF K T F V R K 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 1 1 0 0 1 0 0 10 0 1212.5631 P51398 P51398 93 102 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.0015398 138.06 By MS/MS 7 0 1 1 2553700 2553700 0 13696 963 14538 34684 24465 24465 729 0 45636 0 TFSEILNR DLEVRSLETCMYDHKTFSEILNRVQKAVDD TCMYDHKTFSEILNRVQKAVDDLNLHSYSN K T F N R V 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 8 0 978.51345 Q14204 Q14204 873 880 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0026636 152.47 By MS/MS 1 0 1 1 765180 765180 0 13697 1421 14539 34685 24466 24466 1 37385 0 TFSSIPVSR FVFEPPPGVKANMLRTFSSIPVSRICKSPN KANMLRTFSSIPVSRICKSPNERARLYFLL R T F S R I 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 3 1 0 0 1 0 0 9 0 992.5291 Q14204 Q14204 4160 4168 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0034007 119.21 By MS/MS 1.5 0.5 1 1 2 1003900 1003900 0 13698 1421 14540 34686;34687 24467 24467 1 49264 0 TFSYAGFEMQPK ALEDSQLVAGVAFKKTFSYAGFEMQPKKYH FKKTFSYAGFEMQPKKYHNPKIALLNVELE K T F P K K 1 0 0 0 0 1 1 1 0 0 0 1 1 2 1 1 1 0 1 0 0 0 12 0 1404.6384 Q99832 Q99832 219 230 CCT7 T-complex protein 1 subunit eta yes yes 2 6.085E-11 201.84 By MS/MS By MS/MS 5.23 2.12 1 1 1 1 2 3 2 2 12 1 89394000 89321000 73012 13699 2295 14541;14542 34688;34689;34690;34691;34692;34693;34694;34695;34696;34697;34698;34699;34700 24468;24469;24470;24471;24472;24473 24473 1440 6 858740 223920 TFTFDTVFGPESK TITVHKTDSSNEPPKTFTFDTVFGPESKQL PKTFTFDTVFGPESKQLDVYNLTARPIIDS K T F S K Q 0 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 3 0 0 1 0 0 13 0 1474.698 Q9Y496 Q9Y496 60 72 KIF3A Kinesin-like protein KIF3A yes yes 2 0.0011105 130.01 By MS/MS 5 0 1 1 65402 65402 0 13700 2948 14543 34701 24474 24474 1 2688.3 0 TFTWLVGK AAYARDALAKAVYSRTFTWLVGKINRSLAS AKAVYSRTFTWLVGKINRSLASKDVESPSW R T F G K I 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 2 1 0 1 0 0 8 0 950.52255 O00159 O00159 389 396 MYO1C Unconventional myosin-Ic yes yes 2 0.031882 98.458 By MS/MS 4 0 1 1 492030 492030 0 13701 72 14544 34702 24475 24475 1 13432 0 TFVEESIYNEFLER ALFFNMGQCCCAGSRTFVEESIYNEFLERT RTFVEESIYNEFLERTVEKAKQRKVGNPFE R T F E R T 0 1 1 0 0 0 4 0 0 1 1 0 0 2 0 1 1 0 1 1 0 0 14 0 1774.8414 P30837 P30837 325 338 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 3.2368E-46 322.23 By MS/MS 6 0 1 1 7718500 7718500 0 13702 747 14545 34703 24476 24476 1 60189 0 TFVNITPAEVGVLVGK GYKDSPSVWAAVPGKTFVNITPAEVGVLVG FVNITPAEVGVLVGKDRSSFYVNGLTLGGQ K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 P07737 P07737 39 54 PFN1 Profilin-1 yes yes 2 0.015116 101.71 By MS/MS 10 0 1 1 185750 185750 0 13703 491 14546 34704 24477 24477 1 197430 0 TFVQEDIYDEFVER ALFFNQGQCCCAGSRTFVQEDIYDEFVERS RTFVQEDIYDEFVERSVARAKSRVVGNPFD R T F E R S 0 1 0 2 0 1 3 0 0 1 0 0 0 2 0 0 1 0 1 2 0 0 14 0 1788.8206 P05091 P05091 325 338 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 5.6882E-18 220.37 By MS/MS 7.33 1.25 1 1 1 3 11532000 11532000 0 13704 467 14547 34705;34706;34707 24478;24479 24478 2 263080 0 TFVSGACDASIK HSGDVMSLSLAPDGRTFVSGACDASIKLWD DGRTFVSGACDASIKLWDVRDSMCRQTFIG R T F I K L 2 0 0 1 1 0 0 1 0 1 0 1 0 1 0 2 1 0 0 1 0 0 12 0 1254.5914 P62879 P62879 198 209 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes yes 2 0.00094975 133.89 By MS/MS 8.5 0.5 1 1 2 3273600 3273600 0 13705 1156 14548 34708;34709 24480 24480 1 331640 0 TFYGLHQDFPSVVLVGLGK TLNISGPPLKAGKTRTFYGLHQDFPSVVLV LHQDFPSVVLVGLGKKAAGIDEQENWHEGK R T F G K K 0 0 0 1 0 1 0 3 1 0 3 1 0 2 1 1 1 0 1 3 0 0 19 0 2076.1044 P28838 P28838 85 103 LAP3 Cytosol aminopeptidase yes yes 3 0.0060431 77.13 By MS/MS 6 0 1 1 677650 677650 0 13706 722 14549 34710 24481 24481 1 5284.4 0 TGAAPIIDVVR TLVSEQTRVNAAKNKTGAAPIIDVVRSGYY AKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ K T G V R S 2 1 0 1 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1110.6397 P46776 P46776 95 105 RPL27A 60S ribosomal protein L27a yes yes 2 6.693E-06 175.93 By MS/MS By matching 9.67 0.471 1 2 2 1 5353600 5301000 52616 13707 884 14550 34711;34712;34713 24482;24483 24482 2 4129300 1349600 TGAAYPCFCSPQR QRLELYAQATEALLKTGAAYPCFCSPQRLE LKTGAAYPCFCSPQRLELLKKEALRNHQTP K T G Q R L 2 1 0 0 2 1 0 1 0 0 0 0 0 1 2 1 1 0 1 0 0 0 13 0 1513.6442 Q5JPH6 Q5JPH6 134 146 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.0039482 109.16 By MS/MS 6 0 1 1 6137800 6137800 0 13708 1604 14551 34714 24484 24484 1 47863 0 TGAEGAVLDEAK KLYLVDLAGSEKVSKTGAEGAVLDEAKNIN VSKTGAEGAVLDEAKNINKSLSALGNVISA K T G A K N 3 0 0 1 0 0 2 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 12 0 1159.5721 P33176;Q12840;O60282 P33176 241 252 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 1.6943E-07 190.57 By MS/MS 4 0 1 1 5640500 5640500 0 13709 767 14552 34715 24485 24485 1 153980 0 TGAEGAVLDEAKNINK KLYLVDLAGSEKVSKTGAEGAVLDEAKNIN GAEGAVLDEAKNINKSLSALGNVISALAEG K T G N K S 3 0 2 1 0 0 2 2 0 1 1 2 0 0 0 0 1 0 0 1 0 0 16 1 1628.837 P33176;Q12840;O60282 P33176 241 256 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 1.2598E-13 251.75 By MS/MS 4 0 1 1 647470 647470 0 13710 767 14553 34716 24486 24486 1 17675 0 TGAELVTCGSVLK GLLLALLVPGGGAAKTGAELVTCGSVLKLL AKTGAELVTCGSVLKLLNTHHRVRLHSHDI K T G L K L 1 0 0 0 1 0 1 2 0 0 2 1 0 0 0 1 2 0 0 2 0 0 13 0 1333.6912 Q9HCN8 Q9HCN8 31 43 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2 1.8487E-18 231.42 By MS/MS 9.5 0.5 1 1 2 3849000 3849000 0 13711 2563 14554 34717;34718 24487 24487 1 2235500 0 TGAFALPILNALLETPQR QGRDIIGLAETGSGKTGAFALPILNALLET FALPILNALLETPQRLFALVLTPTRELAFQ K T G Q R L 3 1 1 0 0 1 1 1 0 1 4 0 0 1 2 0 2 0 0 0 0 0 18 0 1924.0782 Q9H0S4 Q9H0S4 75 92 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 2 0.023183 72.891 By MS/MS 6 0 1 1 41670 41670 0 13712 2457 14555 34719 24488;24489 24489 2 324.94 0 TGAIIPELEREIR LYSDLADLMLRHGWRTGAIIPELEREIRII WRTGAIIPELEREIRIINTEQYMHSLTWQQ R T G I R I 1 2 0 0 0 0 3 1 0 3 1 0 0 0 1 0 1 0 0 0 0 0 13 1 1495.8358 Q9H857 Q9H857 375 387 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 3 0.011158 80.979 By MS/MS 6.5 0.5 1 1 2 1986900 1986900 0 13713 2522 14556 34720;34721 24490 24490 1 16875 0 TGAIVDVPVGEELLGR FGNDKLIKEGDIVKRTGAIVDVPVGEELLG GAIVDVPVGEELLGRVVDALGNAIDGKGPI R T G G R V 1 1 0 1 0 0 2 3 0 1 2 0 0 0 1 0 1 0 0 3 0 0 16 0 1623.8832 P25705 P25705 134 149 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 9.4476E-15 205.02 By MS/MS By MS/MS 6.7 1.73 1 1 4 1 1 1 1 9 1 343130000 342950000 176900 13714 687 14557 34722;34723;34724;34725;34726;34727;34728;34729;34730;34731 24491;24492;24493;24494;24495;24496;24497;24498;24499;24500 24494 10 3588900 542550 TGALLLQGFIQDR QPRGGGPTSSEQIMKTGALLLQGFIQDRAG MKTGALLLQGFIQDRAGRMGGEAPELALDP K T G D R A 1 1 0 1 0 2 0 2 0 1 3 0 0 1 0 0 1 0 0 0 0 0 13 0 1430.7882 Q07812 Q07812 22 34 BAX Apoptosis regulator BAX yes yes 2 1.8945E-05 169.89 By MS/MS 9 0 1 1 133250 133250 0 13715 1281 14558 34732 24501 24501 1 76475 0 TGASVLNK LKDQQEGKKGKTTIKTGASVLNKWQMNPYD KGKTTIKTGASVLNKWQMNPYDRGSAFAIG K T G N K W 1 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 8 0 788.43922 Q92499 Q92499 83 90 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.052476 90.37 By MS/MS 4 0.816 1 1 1 3 2639800 2639800 0 13716 2051 14559 34733;34734;34735 24502 24502 1 80710 0 TGAVGDLVIIGDR LQTSVELCCGTHLLRTGAVGDLVIIGDRQL LRTGAVGDLVIIGDRQLSKGTTRLLAVTGE R T G D R Q 1 1 0 2 0 0 0 3 0 2 1 0 0 0 0 0 1 0 0 2 0 0 13 0 1284.7038 Q5JTZ9 Q5JTZ9 757 769 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 1.3074E-17 220.5 By MS/MS 6.5 1.71 1 1 1 1 1 1 6 31215000 31215000 0 13717 1611 14560 34736;34737;34738;34739;34740;34741 24503;24504;24505;24506;24507 24504 5 1684100 0 TGAYQYTIR ITLYPSILTFPWQPKTGAYQYTIRAHGGSG FPWQPKTGAYQYTIRAHGGSGNFSWSSSSH K T G I R A 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 2 0 2 0 0 0 9 0 1071.5349 Q8TEM1 Q8TEM1 469 477 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.0014785 135.43 By MS/MS 1.5 0.5 1 1 2 489540 489540 0 13718 2002 14561 34742;34743 24508;24509 24508 2 24154 0 TGCNVLLIQK EERAYILNLVKQIKKTGCNVLLIQKSILRD KQIKKTGCNVLLIQKSILRDALSDLALHFL K T G Q K S 0 0 1 0 1 1 0 1 0 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1144.6274 P50991 P50991 293 302 CCT4 T-complex protein 1 subunit delta yes yes 2 1.0066E-15 221.94 By MS/MS 5.2 2.52 1 1 1 1 1 1 2 1 1 10 180600000 180600000 0 13719 956 14562 34744;34745;34746;34747;34748;34749;34750;34751;34752;34753 24510;24511;24512;24513;24514;24515 24510 6 1926700 0 TGDKGFSSTFTGER QPSSKTPRIPKIYTKTGDKGFSSTFTGERR KTGDKGFSSTFTGERRPKDDQVFEAVGTTD K T G E R R 0 1 0 1 0 0 1 3 0 0 0 1 0 2 0 2 3 0 0 0 0 0 14 1 1488.6845 Q96EY8 Q96EY8 62 75 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes yes 2;3 0.00030574 166.7 By MS/MS 9 0 2 2 1449700 1449700 0 13720 2171 14563 34754;34755 24516;24517 24517 2 831990 0 TGEAIVDAALSALR FGSNKNRPEDYQGGRTGEAIVDAALSALRQ RTGEAIVDAALSALRQLVKDRLGGRSGGYS R T G L R Q 4 1 0 1 0 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1385.7514 Q15084 Q15084 119 132 PDIA6 Protein disulfide-isomerase A6 yes yes 2;3 3.8396E-08 181.67 By MS/MS 6 0 2 2 24346000 24346000 0 13721 1478 14564 34756;34757 24518;24519;24520 24520 3 189850 0 TGEAYVQFEEPEMANQALLK IVDITFVMDYRGRRKTGEAYVQFEEPEMAN VQFEEPEMANQALLKHREEIGNRYIEIFPS K T G L K H 3 0 1 0 0 2 4 1 0 0 2 1 1 1 1 0 1 0 1 1 0 0 20 0 2267.078 Q12849 Q12849 290 309 GRSF1 G-rich sequence factor 1 yes yes 2 4.4853E-25 212.11 By MS/MS 6 0 1 1 2157500 2157500 0 13722 1310 14565 34758 24521 24521 1 16824 0 TGEEDEEEFFCNR HFEPVVPLPDKIEVKTGEEDEEEFFCNRAK VKTGEEDEEEFFCNRAKLFRFDVESKEWKE K T G N R A 0 1 1 1 1 0 5 1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 13 0 1660.6311 P49792 P49792 1186 1198 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.0055826 112.13 By MS/MS 1 0 1 1 95477 95477 0 13723 933 14566 34759 24522 24522 0 4664.8 0 TGEEIFGTIGMRPNAK WKQTVFYMEDYLTVKTGEEIFGTIGMRPNA GEEIFGTIGMRPNAKNNRDLDFTIDLDFKG K T G A K N 1 1 1 0 0 0 2 3 0 2 0 1 1 1 1 0 2 0 0 0 0 0 16 1 1719.8614 Q99873 Q99873 327 342 PRMT1 Protein arginine N-methyltransferase 1 yes yes 3 0.01784 69.716 By MS/MS 1 0 1 1 361640 361640 0 13724 2296 14567 34760 24523 24523 1449 1 17669 0 TGEEINFGK KDIIHFFRHREQKEKTGEEINFGKLITKPS REQKEKTGEEINFGKLITKPSEGTTLRVED K T G G K L 0 0 1 0 0 0 2 2 0 1 0 1 0 1 0 0 1 0 0 0 0 0 9 0 993.47673 P49959 P49959 408 416 MRE11A Double-strand break repair protein MRE11A yes yes 2 0.00079651 146.69 By MS/MS 5 0 1 1 603860 603860 0 13725 942 14568 34761 24524 24524 1 24821 0 TGELGYLNPGVFTQSR SRSHQHVKITYRDGRTGELGYLNPGVFTQS GELGYLNPGVFTQSRRWKDHADMLKQYATC R T G S R R 0 1 1 0 0 1 1 3 0 0 2 0 0 1 1 1 2 0 1 1 0 0 16 0 1737.8686 P38435 P38435 420 435 GGCX Vitamin K-dependent gamma-carboxylase yes yes 2 0.008655 96.059 By MS/MS 2 0.816 1 1 1 3 216240 216240 0 13726 818 14569 34762;34763;34764 24525 24525 1 8625.4 0 TGENVEDAFLEAAK FAEENGLLFLEASAKTGENVEDAFLEAAKK KTGENVEDAFLEAAKKIYQNIQDGSLDLNA K T G A K K 3 0 1 1 0 0 3 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 14 0 1492.7046 P61106 P61106 157 170 RAB14 Ras-related protein Rab-14 yes yes 2 5.2792E-59 290.61 By MS/MS 9 0 1 1 711350 711350 0 13727 1088 14570 34765 24526 24526 1 408250 0 TGENVEDAFLEAAKK FAEENGLLFLEASAKTGENVEDAFLEAAKK TGENVEDAFLEAAKKIYQNIQDGSLDLNAA K T G K K I 3 0 1 1 0 0 3 1 0 0 1 2 0 1 0 0 1 0 0 1 0 0 15 1 1620.7995 P61106 P61106 157 171 RAB14 Ras-related protein Rab-14 yes yes 2;3 3.5255E-15 213.99 By MS/MS 8.67 0.471 1 2 3 2905300 2905300 0 13728 1088 14571 34766;34767;34768 24527;24528 24527 2 1633500 0 TGESQNQLAVDQIAFQK SIFVKLLKISGIILKTGESQNQLAVDQIAF ESQNQLAVDQIAFQKKLFQTLRRHPSYPKI K T G Q K K 2 0 1 1 0 4 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 17 0 1875.9327 Q9BXW9 Q9BXW9 61 77 FANCD2 Fanconi anemia group D2 protein yes yes 2 1.5126E-10 206.49 By MS/MS 4 0.816 1 1 1 3 895310 895310 0 13729 2405 14572 34769;34770;34771 24529 24529 1 25679 0 TGETGIEETILEGHLGVTK NEIDWLKRIRDDVKRTGETGIEETILEGHL GIEETILEGHLGVTKELLAFQTSEKKFHIG R T G T K E 0 0 0 0 0 0 4 4 1 2 2 1 0 0 0 0 4 0 0 1 0 0 19 0 1983.0161 Q93008 Q93008 1417 1435 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.00076052 107.62 By MS/MS 2 0.816 1 1 1 3 1398600 1398600 0 13730 2096 14573 34772;34773;34774 24530;24531 24530 2 50395 0 TGFAEGFLK MKTKNIPEAHQDAFKTGFAEGFLKAQALTQ HQDAFKTGFAEGFLKAQALTQKTNDSLRRT K T G L K A 1 0 0 0 0 0 1 2 0 0 1 1 0 2 0 0 1 0 0 0 0 0 9 0 968.49673 Q96TA2 Q96TA2 270 278 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 2 0.00051202 153.08 By MS/MS 6.5 0.5 1 1 2 3224800 3224800 0 13731 2263 14574 34775;34776 24532;24533 24532 2 29048 0 TGFFEFQAAK TDQNYEKMMFKEALKTGFFEFQAAKDKYRE KEALKTGFFEFQAAKDKYRELAVEGMHREL K T G A K D 2 0 0 0 0 1 1 1 0 0 0 1 0 3 0 0 1 0 0 0 0 0 10 0 1144.5553 Q9P2J5 Q9P2J5 823 832 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 0.00093175 138.08 By MS/MS 4 0.816 1 1 1 3 6939800 6939800 0 13732 2738 14575 34777;34778;34779 24534 24534 1 185850 0 TGGADQSLQQGEGSK YAAEMIPKLKTRTQKTGGADQSLQQGEGSK TGGADQSLQQGEGSKKGKGKKKK_______ K T G S K K 1 0 0 1 0 3 1 4 0 0 1 1 0 0 0 2 1 0 0 0 0 0 15 0 1461.6696 P09132 P09132 122 136 SRP19 Signal recognition particle 19 kDa protein yes yes 2 1.2E-28 243.37 By MS/MS By matching 10 0 2 1 1 2230900 2208600 22245 13733 512 14576 34780;34781 24535 24535 1 2347500 570560 TGGADQSLQQGEGSKK YAAEMIPKLKTRTQKTGGADQSLQQGEGSK GGADQSLQQGEGSKKGKGKKKK________ K T G K K G 1 0 0 1 0 3 1 4 0 0 1 2 0 0 0 2 1 0 0 0 0 0 16 1 1589.7645 P09132 P09132 122 137 SRP19 Signal recognition particle 19 kDa protein yes yes 2;3 4.544E-09 144.28 By MS/MS 10 0 2 2 1217600 1217600 0 13734 512 14577 34782;34783 24536;24537 24537 2 1294200 0 TGGAYGEDLGADYNLSQVCDGK PKAKYHGNVMLLRAKTGGAYGEDLGADYNL DLGADYNLSQVCDGKVSVHVIEGDHRTLLE K T G G K V 2 0 1 3 1 1 1 5 0 0 2 1 0 0 0 1 1 0 2 1 0 0 22 0 2288.9856 P49327 P49327 2450 2471 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 2.9429E-26 282.09 By MS/MS 2.9 1.14 1 3 3 2 1 10 9147500 9147500 0 13735 915 14578 34784;34785;34786;34787;34788;34789;34790;34791;34792;34793 24538;24539;24540;24541;24542;24543 24543 6 370120 0 TGGGFQR SLYIILKKLLDFILKTGGGFQRVRTHLYGS KLLDFILKTGGGFQRVRTHLYGSLLYYLQI K T G Q R V 0 1 0 0 0 1 0 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 7 0 721.35074 Q92621 Q92621 1410 1416 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.042356 106.42 By MS/MS 2 0 1 1 102520 102520 0 13736 2070 14579 34794 24544 24544 1 5095.9 0 TGGLEIDSDFGGFR IVAAVGLEPNVELAKTGGLEIDSDFGGFRV KTGGLEIDSDFGGFRVNAELQARSNIWVAG K T G F R V 0 1 0 2 0 0 1 4 0 1 1 0 0 2 0 1 1 0 0 0 0 0 14 0 1469.6787 O95831 O95831 409 422 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 4.0295E-46 271.65 By MS/MS 5.75 0.829 2 1 1 4 16946000 16946000 0 13737 409 14580 34795;34796;34797;34798 24545;24546;24547;24548 24547 4 503760 0 TGGTQTDLFTCGK KNLTKEAIREHQMAKTGGTQTDLFTCGKCK AKTGGTQTDLFTCGKCKKKNCTYTQVQTRS K T G G K C 0 0 0 1 1 1 0 3 0 0 1 1 0 1 0 0 4 0 0 0 0 0 13 0 1384.6293 P23193;Q15560 P23193 253 265 TCEA1;TCEA2 Transcription elongation factor A protein 1;Transcription elongation factor A protein 2 yes no 2 7.6391E-18 225.79 By MS/MS 7 0 1 1 1878300 1878300 0 13738 664 14581 34799 24549 24549 1 33566 0 TGIEQGSDAGYLCESQK KGLYPAPLKIIDVVKTGIEQGSDAGYLCES IEQGSDAGYLCESQKFGELVMTKESKALMG K T G Q K F 1 0 0 1 1 2 2 3 0 1 1 1 0 0 0 2 1 0 1 0 0 0 17 0 1841.8102 P40939 P40939 310 326 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 5.4663E-55 274.45 By MS/MS 6 0.816 1 1 1 3 20056000 20056000 0 13739 835 14582 34800;34801;34802 24550 24550 1 743370 0 TGISDVFAK FVGNLNFNKSAPELKTGISDVFAKNDLAVV SAPELKTGISDVFAKNDLAVVDVRIGMTRK K T G A K N 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 0 936.49165 P19338 P19338 325 333 NCL Nucleolin yes yes 2 0.0065163 112.41 By MS/MS 4 0 1 1 571390 571390 0 13740 629 14583 34803 24551 24551 1 15598 0 TGKEYIPGQPPLSQSSDSSPTR AVECLLSLKAQYKEKTGKEYIPGQPPLSQS GQPPLSQSSDSSPTRNSEPAGLETPEAKVL K T G T R N 0 1 0 1 0 2 1 2 0 1 1 1 0 0 4 5 2 0 1 0 0 0 22 1 2331.1343 P07814 P07814 868 889 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.00021548 88.329 By MS/MS 3.5 0.5 1 1 2 2359600 2359600 0 13741 493 14584 34804;34805 24552 24552 1 61883 0 TGLFTPDMAFEAIVK RREISYAIKNIHGIRTGLFTPDMAFEAIVK TGLFTPDMAFEAIVKKQIVKLKGPSLKSVD R T G V K K 2 0 0 1 0 0 1 1 0 1 1 1 1 2 1 0 2 0 0 1 0 0 15 0 1638.8327 Q9UQ16 Q9UQ16 400 414 DNM3 Dynamin-3 yes yes 2 0.035809 65.5 By MS/MS 4 0 1 1 54339 54339 0 13742 2857 14585 34806 24553 24553 1640 1 1483.4 0 TGLIDYNQLALTAR TSIFFESMPYKLNPKTGLIDYNQLALTARL KTGLIDYNQLALTARLFRPRLIIAGTSAYA K T G A R L 2 1 1 1 0 1 0 1 0 1 3 0 0 0 0 0 2 0 1 0 0 0 14 0 1547.8308 P34897 P34897 201 214 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 6.2552E-08 229 By MS/MS 6.5 0.5 1 1 2 11448000 11448000 0 13743 777 14586 34807;34808 24554 24554 1 91218 0 TGLTPLMEAASGGYAEVGR SLLLDRKANVEHRAKTGLTPLMEAASGGYA PLMEAASGGYAEVGRVLLDKGADVNAPPVP K T G G R V 3 1 0 0 0 0 2 4 0 0 2 0 1 0 1 1 2 0 1 1 0 0 19 0 1878.9146 O75179;Q8IWZ3 Q8IWZ3 1256 1274 ANKRD17;ANKHD1 Ankyrin repeat domain-containing protein 17;Ankyrin repeat and KH domain-containing protein 1 no no 2 0.00044578 115.12 By MS/MS 2 0.816 1 1 1 3 307130 307130 0 13744 290;1868 14587 34809;34810;34811 24555 24555 160 1 12589 0 TGLYNYYDDEK MVTRSYTVGVMMMHRTGLYNYYDDEKEKLQ MMHRTGLYNYYDDEKEKLQIVEMPLAHKLS R T G E K E 0 0 1 2 0 0 1 1 0 0 1 1 0 0 0 0 1 0 3 0 0 0 11 0 1379.5881 P50454 P50454 240 250 SERPINH1 Serpin H1 yes yes 2 8.8825E-11 204.56 By MS/MS 7 0 1 1 2415200 2415200 0 13745 947 14588 34812 24556 24556 1 43161 0 TGLYNYYDDEKEK MVTRSYTVGVMMMHRTGLYNYYDDEKEKLQ HRTGLYNYYDDEKEKLQIVEMPLAHKLSSL R T G E K L 0 0 1 2 0 0 2 1 0 0 1 2 0 0 0 0 1 0 3 0 0 0 13 1 1636.7257 P50454 P50454 240 252 SERPINH1 Serpin H1 yes yes 2;3 6.8942E-07 214.04 By MS/MS 6.67 0.471 1 2 3 12122000 12122000 0 13746 947 14589 34813;34814;34815 24557;24558;24559 24559 3 163140 0 TGNAWHSK KEDAIEHFMKLYEEKTGNAWHSKNFTKYPK MKLYEEKTGNAWHSKNFTKYPKKFYPLEID K T G S K N 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 8 0 899.42496 P09874 P09874 622 629 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.006471 131.62 By MS/MS 4.2 0.748 1 2 2 5 1986900 1986900 0 13747 521 14590 34816;34817;34818;34819;34820 24560;24561 24560 2 55905 0 TGNFQVTELGR ALMLDKNNLVKYDKKTGNFQVTELGRIASH YDKKTGNFQVTELGRIASHYYITNDTVQTY K T G G R I 0 1 1 0 0 1 1 2 0 0 1 0 0 1 0 0 2 0 0 1 0 0 11 0 1220.6149 O75643 O75643 976 986 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.0225E-22 238.51 By MS/MS 2.5 1.12 1 1 1 1 4 1679400 1679400 0 13748 322 14591 34821;34822;34823;34824 24562;24563 24562 2 69680 0 TGNIPALVR MALFPHLLQPVLWERTGNIPALVRLLQAFL PVLWERTGNIPALVRLLQAFLERGSNTIAS R T G V R L 1 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 9 0 939.55016 P55060 P55060 698 706 CSE1L Exportin-2 yes yes 2 0.026353 93.143 By MS/MS 4.5 0.5 1 1 2 15641000 15641000 0 13749 1025 14592 34825;34826 24564 24564 1 576470 0 TGNLETCLR VTAKDLSKQLHSSVRTGNLETCLRLLSLGA LHSSVRTGNLETCLRLLSLGAQANFFHPEK R T G L R L 0 1 1 0 1 0 1 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1062.5128 Q9Y2X7;Q14161 Q9Y2X7 143 151 GIT1;GIT2 ARF GTPase-activating protein GIT1;ARF GTPase-activating protein GIT2 yes no 2 4.4179E-06 179.81 By MS/MS By matching 4 0.816 1 1 1 2 1 1732900 1658300 74554 13750 2905 14593 34827;34828;34829 24565 24565 1 58986 106850 TGPTQQQVEGR YTITKGPSKLVAQRRTGPTQQQVEGRLGEL AQRRTGPTQQQVEGRLGELLKCRQPAPPTS R T G G R L 0 1 0 0 0 3 1 2 0 0 0 0 0 0 1 0 2 0 0 1 0 0 11 0 1199.5895 Q9BUT9 Q9BUT9 17 27 FAM195A Protein FAM195A yes yes 2 0.00037736 147.73 By MS/MS 9.5 0.5 1 1 2 285960 285960 0 13751 2368 14594 34830;34831 24566 24566 1 232090 0 TGPVAVR LHAILNILEKGTEGRTGPVAVRESPQLAEL LEKGTEGRTGPVAVRESPQLAELCYQVIYQ R T G V R E 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 2 0 0 7 0 698.40752 Q92621 Q92621 1048 1054 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.054289 100.07 By MS/MS 2.5 1.12 1 1 1 1 4 1018500 1018500 0 13752 2070 14595 34832;34833;34834;34835 24567 24567 1 43210 0 TGQAAELGGLLK VKEQSILELGSLLAKTGQAAELGGLLKYVR LAKTGQAAELGGLLKYVRPFLNSISKAKAA K T G L K Y 2 0 0 0 0 1 1 3 0 0 3 1 0 0 0 0 1 0 0 0 0 0 12 0 1156.6452 O00231 O00231 60 71 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 1.8679E-16 218.55 By MS/MS By matching 7.33 0.471 2 1 2 1 32117000 32089000 28362 13753 80 14596 34836;34837;34838 24568;24569 24568 2 573430 116430 TGQAPGYSYTAANK KHKTGPNLHGLFGRKTGQAPGYSYTAANKN KTGQAPGYSYTAANKNKGIIWGEDTLMEYL K T G N K N 3 0 1 0 0 1 0 2 0 0 0 1 0 0 1 1 2 0 2 0 0 0 14 0 1427.6681 P99999 P99999 41 54 CYCS Cytochrome c yes yes 2 0.00014981 141.73 By MS/MS 10 0 1 1 1043000 1043000 0 13754 1227 14597 34839 24570 24570 1 1108600 0 TGQEVVFVAEPDNK ELTPHQTFVRLHNQKTGQEVVFVAEPDNKN KTGQEVVFVAEPDNKNVYKFELDTSERKIE K T G N K N 1 0 1 1 0 1 2 1 0 0 0 1 0 1 1 0 1 0 0 3 0 0 14 0 1531.7518 P04844 P04844 443 456 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 7.5357E-05 187.58 By MS/MS By MS/MS 3.5 1.71 1 1 1 1 1 1 5 1 4356300 4307700 48648 13755 459 14598 34840;34841;34842;34843;34844;34845 24571;24572;24573;24574;24575 24575 5 191370 149200 TGQEVVFVAEPDNKNVYK ELTPHQTFVRLHNQKTGQEVVFVAEPDNKN EVVFVAEPDNKNVYKFELDTSERKIEFDSA K T G Y K F 1 0 2 1 0 1 2 1 0 0 0 2 0 1 1 0 1 0 1 4 0 0 18 1 2036.0215 P04844 P04844 443 460 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 3 0.0092886 74.89 By MS/MS 2 0.816 1 1 1 3 555690 555690 0 13756 459 14599 34846;34847;34848 24576 24576 1 24760 0 TGQGQSASGSSAWSTVFR ______________________________ GQSASGSSAWSTVFRHVRYENLIAGVSGGV M T G F R H 2 1 0 0 0 2 0 3 0 0 0 0 0 1 0 5 2 1 0 1 0 0 18 0 1812.8391 Q9H2D1 Q9H2D1 2 19 SLC25A32 Mitochondrial folate transporter/carrier yes yes 2 0.00082703 148.18 By MS/MS 8 0 1 1 293430 293430 0 13757 2475 14600 34849 24577 24577 1 19357 0 TGQLFLK TTKPINGAIFIFNPRTGQLFLKIIHTSVWA AIFIFNPRTGQLFLKIIHTSVWAGQKRLGQ R T G L K I 0 0 0 0 0 1 0 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 7 0 805.46979 Q6P2Q9 Q6P2Q9 1814 1820 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.007288 166.34 By MS/MS 2 0.816 1 1 1 3 1348200 1348200 0 13758 1706 14601 34850;34851;34852 24578 24578 1 61838 0 TGQSVDELFQK YADNIKAQLFETSSKTGQSVDELFQKVAED TSSKTGQSVDELFQKVAEDYVSVAAFQVMT K T G Q K V 0 0 0 1 0 2 1 1 0 0 1 1 0 1 0 1 1 0 0 1 0 0 11 0 1250.6143 Q969Q5 Q969Q5 157 167 RAB24 Ras-related protein Rab-24 yes yes 2 0.0024982 118.23 By MS/MS 9 0 1 1 699300 699300 0 13759 2106 14602 34853 24579;24580 24579 2 401340 0 TGQYSGIYDCAK IYPMEVMKTRLAVGKTGQYSGIYDCAKKIL VGKTGQYSGIYDCAKKILKHEGLGAFYKGY K T G A K K 1 0 0 1 1 1 0 2 0 1 0 1 0 0 0 1 1 0 2 0 0 0 12 0 1361.5922 Q6NUK1 Q6NUK1 321 332 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 1.7804E-05 173.04 By MS/MS 7 0.816 1 1 1 3 12206000 12206000 0 13760 1690 14603 34854;34855;34856 24581 24581 1 224910 0 TGRLPEAAFLAR FLQGKVDACLELLIRTGRLPEAAFLARTYL LIRTGRLPEAAFLARTYLPSQVSRVVKLWR R T G A R T 3 2 0 0 0 0 1 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 12 1 1300.7252 P35606 P35606 748 759 COPB2 Coatomer subunit beta yes yes 3 0.023314 77.593 By MS/MS 1 0 1 1 339910 339910 0 13761 795 14604 34857 24582 24582 1 16608 0 TGSESSQTGTSTTSSR PSWRSEETQERERSRTGSESSQTGTSTTSS GSESSQTGTSTTSSRNARRRESEKSLENET R T G S R N 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 6 5 0 0 0 0 0 16 0 1572.6863 P23588 P23588 420 435 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 7.0941E-93 342.58 By MS/MS By MS/MS 5.8 0.748 2 2 1 3 2 3675500 2777100 898370 13762 672 14605 34858;34859;34860;34861;34862 24583;24584;24585;24586 24585 4 65270 2666800 TGSIFLAQTQDR YQLEQETGIQTGYTRTGSIFLAQTQDRLIS YTRTGSIFLAQTQDRLISLKRINAGLNVIG R T G D R L 1 1 0 1 0 2 0 1 0 1 1 0 0 1 0 1 2 0 0 0 0 0 12 0 1335.6783 Q8NCN5 Q8NCN5 125 136 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 1.0456E-07 192.5 By MS/MS 3.5 0.5 1 1 2 2054200 2054200 0 13763 1955 14606 34863;34864 24587 24587 1 55804 0 TGSQGQCTQVR VQPIKLARVTKVLGRTGSQGQCTQVRVEFM VLGRTGSQGQCTQVRVEFMDDTSRSIIRNV R T G V R V 0 1 0 0 1 3 0 2 0 0 0 0 0 0 0 1 2 0 0 1 0 0 11 0 1220.5568 P62857 P62857 21 31 RPS28 40S ribosomal protein S28 yes yes 2 2.0496E-22 246.86 By MS/MS By MS/MS 10 0 2 1 1 4036200 3686700 349540 13764 1152 14607 34865;34866 24588;24589 24589 2 3918500 8965400 TGSQYDIQDAIDK TGSDGSTRVVLVDRKTGSQYDIQDAIDKGL RKTGSQYDIQDAIDKGLVDRKFFDQYRSGS K T G D K G 1 0 0 3 0 2 0 1 0 2 0 1 0 0 0 1 1 0 1 0 0 0 13 0 1452.6733 P15924 P15924 2524 2536 DSP Desmoplakin yes yes 2 0.0011325 114.87 By MS/MS 2 0 1 1 0 0 0 13765 603 14608 34867 24590 24590 1 0 0 TGSSFSVR GDPKLPVLYQVERTRTGSSFSVRSVKAVQH YQVERTRTGSSFSVRSVKAVQHGKPIFICQ R T G V R S 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 3 1 0 0 1 0 0 8 0 839.41373 O14734 O14734 103 110 ACOT8 Acyl-coenzyme A thioesterase 8 yes yes 2 0.0077023 127.02 By MS/MS 8 0 1 1 1094100 1094100 0 13766 122 14609 34868 24591 24591 1 72180 0 TGSVDIIVTDLPFGK PIDAVQWDICNLPLRTGSVDIIVTDLPFGK TGSVDIIVTDLPFGKRMGSKKRNWNLYPAC R T G G K R 0 0 0 2 0 0 0 2 0 2 1 1 0 1 1 1 2 0 0 2 0 0 15 0 1560.8399 Q9BV44 Q9BV44 397 411 THUMPD3 THUMP domain-containing protein 3 yes yes 2 2.4137E-05 138.99 By MS/MS 6 0 1 1 374560 374560 0 13767 2371 14610 34869 24592 24592 1 2920.8 0 TGTAEMSSILEER IAARNFHASNTHLQKTGTAEMSSILEERIL QKTGTAEMSSILEERILGADTSVDLEETGR K T G E R I 1 1 0 0 0 0 3 1 0 1 1 0 1 0 0 2 2 0 0 0 0 0 13 0 1422.6661 P25705 P25705 46 58 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 8.7194E-59 295.79 By MS/MS By matching 6 0 2 1 1 21048000 21010000 37546 13768 687 14611 34870;34871 24593 24593 1 163840 115150 TGTAYTFFTPNNIK EDYIHRIGRTARSTKTGTAYTFFTPNNIKQ KTGTAYTFFTPNNIKQVSDLISVLREANQA K T G I K Q 1 0 2 0 0 0 0 1 0 1 0 1 0 2 1 0 4 0 1 0 0 0 14 0 1573.7777 P17844 P17844 438 451 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 6.493E-18 218.55 By MS/MS 5 0 1 1 1321600 1321600 0 13769 616 14612 34872 24594 24594 1 54323 0 TGTIVVEGHELHDEDIR SIKQLSSEELEQFQKTGTIVVEGHELHDED TIVVEGHELHDEDIRLMYTFDQATGGTAQF K T G I R L 0 1 0 2 0 0 3 2 2 2 1 0 0 0 0 0 2 0 0 2 0 0 17 0 1918.9385 P41252 P41252 930 946 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2;3;4 0.00018111 151.66 By MS/MS 3.25 0.433 3 1 4 27127000 27127000 0 13770 840 14613 34873;34874;34875;34876 24595;24596;24597 24597 3 709080 0 TGTLTQNR AVETLGSTSTICSDKTGTLTQNRMTVAHMW STICSDKTGTLTQNRMTVAHMWFDNQIHEA K T G N R M 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 8 0 889.46174 P05023;P50993;Q13733;P20648;P13637;P54707 P05023 378 385 ATP1A1;ATP1A2;ATP1A4;ATP4A;ATP1A3;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2 no no 2 0.0013829 166.68 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 30509000 30509000 0 13771 463;575;1016 14614 34877;34878;34879;34880;34881;34882;34883;34884 24598;24599;24600;24601 24601 4 726810 0 TGTLTTNQMSVCR SVETLGCTSVICSDKTGTLTTNQMSVCRMF DKTGTLTTNQMSVCRMFILDRVEGDTCSLN K T G C R M 0 1 1 0 1 1 0 1 0 0 1 0 1 0 0 1 4 0 0 1 0 0 13 0 1467.681 P16615;Q93084 P16615 353 365 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 3.7769E-35 266.26 By MS/MS 2.62 1.32 2 2 2 1 1 8 7956000 7956000 0 13772 608 14615;14616 34885;34886;34887;34888;34889;34890;34891;34892 24602;24603;24604;24605;24606;24607 24606 399 6 343100 0 TGTPSDPR DLDYGMMSDYGTARRTGTPSDPRRRLRSYE DYGTARRTGTPSDPRRRLRSYEDMIGEEVP R T G P R R 0 1 0 1 0 0 0 1 0 0 0 0 0 0 2 1 2 0 0 0 0 0 8 0 829.393 O60716 O60716 308 315 CTNND1 Catenin delta-1 yes yes 2 0.04858 91.9 By MS/MS 4 0 1 1 342640 342640 0 13773 260 14617 34893 24608 24608 1 9353.8 0 TGTVSLEVR VFEDVVLHQATILPKTGTVSLEVRLLEASR ATILPKTGTVSLEVRLLEASRAFEVSENGN K T G V R L 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 2 0 0 9 0 960.52401 P49327 P49327 928 936 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 1.6962E-06 189.7 By MS/MS 3 1.41 1 1 1 1 1 5 47737000 47737000 0 13774 915 14618 34894;34895;34896;34897;34898 24609;24610;24611;24612 24609 4 1890700 0 TGVAGSQPVSEK LGTDSAEPEMDVRKRTGVAGSQPVSEKQLA RKRTGVAGSQPVSEKQLAAELDLVLQRHQN R T G E K Q 1 0 0 0 0 1 1 2 0 0 0 1 0 0 1 2 1 0 0 2 0 0 12 0 1158.5881 Q9NZ43 Q9NZ43 141 152 USE1 Vesicle transport protein USE1 yes yes 2 0.00042279 142.19 By MS/MS 9 0.816 1 1 1 3 1571500 1571500 0 13775 2706 14619 34899;34900;34901 24613 24613 1 222330 0 TGVAVNKPAEFTVDAK FHPDRVKARGPGLEKTGVAVNKPAEFTVDA GVAVNKPAEFTVDAKHGGKAPLRVQVQDNE K T G A K H 3 0 1 1 0 0 1 1 0 0 0 2 0 1 1 0 2 0 0 3 0 0 16 1 1645.8675 P21333 P21333 685 700 FLNA Filamin-A yes yes 3 0.0013338 112.24 By MS/MS 3.5 1.12 1 1 1 1 4 2493800 2493800 0 13776 648 14620 34902;34903;34904;34905 24614 24614 1 85342 0 TGVIGVQPEEVTAAAK HPSLVADVHQYFYRRTGVIGVQPEEVTAAA GVIGVQPEEVTAAAKKAVMDNRLHKCLLCG R T G A K K 3 0 0 0 0 1 2 2 0 1 0 1 0 0 1 0 2 0 0 3 0 0 16 0 1568.841 Q96JH7 Q96JH7 443 458 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.0031899 127.79 By MS/MS 3 0 1 1 982030 982030 0 13777 2209 14621 34906 24615 24615 1 25636 0 TGVQTFR NSEDKSIRVWDMSKRTGVQTFRRDHDRFWV RVWDMSKRTGVQTFRRDHDRFWVLAAHPNL R T G F R R 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 7 0 807.4239 P53621 P53621 282 288 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.016936 134.81 By MS/MS 2 0.816 1 1 1 3 4697100 4697100 0 13778 1005 14622 34907;34908;34909 24616;24617 24616 2 159850 0 TGVTEWLEPLEAK YRELKFLLVLADGLRTGVTEWLEPLEAKSA LRTGVTEWLEPLEAKSAVELVQEFLNDLNK R T G A K S 1 0 0 0 0 0 3 1 0 0 2 1 0 0 1 0 2 1 0 1 0 0 13 0 1471.7559 Q9H900 Q9H900 281 293 ZWILCH Protein zwilch homolog yes yes 2 7.0453E-08 189.58 By MS/MS 5 0 1 1 336130 336130 0 13779 2526 14623 34910 24618 24618 1 13816 0 TGVVPQLVK YLTDGPNERIGMVVKTGVVPQLVKLLGASE IGMVVKTGVVPQLVKLLGASELPIVTPALR K T G V K L 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 3 0 0 9 0 939.57532 P52292 P52292 292 300 KPNA2 Importin subunit alpha-1 yes yes 2 0.010344 104.06 By MS/MS 7 0.816 1 1 1 3 14055000 14055000 0 13780 983 14624 34911;34912;34913 24619;24620 24619 2 154690 0 TGWISTSSIWK FQHIPYIKEPKSVFRTGWISTSSIWKKPGL SVFRTGWISTSSIWKKPGLEEAVESACAMR R T G W K K 0 0 0 0 0 0 0 1 0 2 0 1 0 0 0 3 2 2 0 0 0 0 11 0 1264.6452 Q9NSE4 Q9NSE4 861 871 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0012412 148.69 By MS/MS 4 0 1 1 0 0 0 13781 2624 14625 34914 24621 24621 1 0 0 TGYFSSTDLGR GRKLDKAQMIRFEERTGYFSSTDLGRTASH FEERTGYFSSTDLGRTASHYYIKYNTIETF R T G G R T 0 1 0 1 0 0 0 2 0 0 1 0 0 1 0 2 2 0 1 0 0 0 11 0 1202.5568 Q8N3C0 Q8N3C0 973 983 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.013196 95.483 By MS/MS 1.5 0.5 1 1 2 506820 506820 0 13782 1908 14626 34915;34916 24622 24622 1 24887 0 TGYGVEELISALQR WSRTVVRDVRLISAKTGYGVEELISALQRS KTGYGVEELISALQRSWRYRGDVYLVGATN K T G Q R S 1 1 0 0 0 1 2 2 0 1 2 0 0 0 0 1 1 0 1 1 0 0 14 0 1534.7991 Q8NC60 Q8NC60 320 333 NOA1 Nitric oxide-associated protein 1 yes yes 2 8.5524E-47 285.83 By MS/MS 5.5 0.5 1 1 2 800470 800470 0 13783 1951 14627 34917;34918 24623;24624 24623 2 6739.6 0 TGYSFVNCK ASASSKELLMKLRRKTGYSFVNCKKALETC MKLRRKTGYSFVNCKKALETCGGDLKQAEI K T G C K K 0 0 1 0 1 0 0 1 0 0 0 1 0 1 0 1 1 0 1 1 0 0 9 0 1074.4804 P43897 P43897 57 65 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.00046591 154.12 By MS/MS 8 0 1 1 7721800 7721800 0 13784 868 14628 34919 24625 24625 1 509400 0 TGYTLDVTTGQR SKGPDEAKIKALLERTGYTLDVTTGQRKYG LERTGYTLDVTTGQRKYGGPPPDSVYSGQQ R T G Q R K 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 4 0 1 1 0 0 12 0 1310.6466 O43390;O60506 O60506 131 142 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 8.305E-05 158.79 By MS/MS 5 0 1 1 1179400 1179400 0 13785 196;252 14629 34920 24626;24627 24626 2 48476 0 TGYTPDEKLR ______________________________ ______________________________ M T G L R L 0 1 0 1 0 0 1 1 0 0 1 1 0 0 1 0 2 0 1 0 0 0 10 1 1178.5932 O95139 O95139 2 11 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes yes 2 0.013206 108.43 By MS/MS 9.5 0.5 1 1 2 16144000 16144000 0 13786 365 14630 34921;34922 24628 24628 1 9494800 0 THAVLVALK EAVKQGSATVGLKSKTHAVLVALKRAQSEL VGLKSKTHAVLVALKRAQSELAAHQKKILH K T H L K R 2 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 950.5913 P25786 P25786 42 50 PSMA1 Proteasome subunit alpha type-1 yes yes 2 0.016646 98.629 By MS/MS 8 0 1 1 1820400 1820400 0 13787 688 14631 34923 24629 24629 1 120090 0 THEDIEAQIR ______________________________ AKIAKTHEDIEAQIREIQGKKAALDEAQGV K T H I R E 1 1 0 1 0 1 2 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 10 0 1210.5942 O75533 O75533 7 16 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00094159 125.57 By MS/MS 3 0 1 1 594460 594460 0 13788 315 14632 34924 24630 24630 1 15519 0 THEEHHAAK ______________________________ ______________________________ M T H A K T 2 0 0 0 0 0 2 0 3 0 0 1 0 0 0 0 1 0 0 0 0 0 9 0 1058.4894 P08237 P08237 2 10 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 0.00086387 126.52 By MS/MS 5 0 1 1 46705 46705 0 13789 500 14633 34925 24631 24631 1 1919.8 0 THIDVIHYR IRVNPRVSNVKSVYKTHIDVIHYRKTDAKR VKSVYKTHIDVIHYRKTDAKRLHGLDEEAE K T H Y R K 0 1 0 1 0 0 0 0 2 2 0 0 0 0 0 0 1 0 1 1 0 0 9 0 1152.604 P33991 P33991 414 422 MCM4 DNA replication licensing factor MCM4 yes yes 3 0.004847 107.15 By MS/MS 4.5 0.5 1 1 2 5079200 5079200 0 13790 773 14634 34926;34927 24632;24633 24632 2 147350 0 THILLFLPK FTEQTAPKIFGGEIKTHILLFLPKSVSDYD FGGEIKTHILLFLPKSVSDYDGKLSNFKTA K T H P K S 0 0 0 0 0 0 0 0 1 1 3 1 0 1 1 0 1 0 0 0 0 0 9 0 1080.6696 P07237 P07237 255 263 P4HB Protein disulfide-isomerase yes yes 2 0.003364 119.29 By MS/MS 6 0 1 1 1801000 1801000 0 13791 487 14635 34928 24634 24634 1 14044 0 THINYGVK YICRNFTGSSALLTRTHINYGVKGDVAVVR SSALLTRTHINYGVKGDVAVVRINSPNSKV R T H V K G 0 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 1 0 1 1 0 0 8 0 930.49232 P40939 P40939 39 46 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.021557 104.75 By MS/MS 5.5 0.5 1 1 2 3516600 3516600 0 13792 835 14636 34929;34930 24635 24635 1 106260 0 THLSLSHNPEQK YTKQGFGNLPICMAKTHLSLSHNPEQKGVP MAKTHLSLSHNPEQKGVPTGFILPIRDIRA K T H Q K G 0 0 1 0 0 1 1 0 2 0 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1389.7001 P11586 P11586 867 878 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 7.8135E-24 238.86 By MS/MS 4.33 0.471 2 1 3 5994200 5994200 0 13793 556 14637 34931;34932;34933 24636;24637 24636 2 166710 0 THLSLSHQPDKK YTQQGFGNLPICMAKTHLSLSHQPDKKGVP MAKTHLSLSHQPDKKGVPRDFILPISDVRA K T H K K G 0 0 0 1 0 1 0 0 2 0 2 2 0 0 1 2 1 0 0 0 0 0 12 1 1389.7365 Q6UB35 Q6UB35 910 921 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 0.019238 80.17 By MS/MS By matching 4 0 2 1 1 3877100 3821800 55290 13794 1726 14638 34934;34935 24638 24638 1 104330 115530 THLTEDTPK MEPAVSEPMRDQVARTHLTEDTPKVNADIE RDQVARTHLTEDTPKVNADIEKVNQNQAKR R T H P K V 0 0 0 1 0 0 1 0 1 0 1 1 0 0 1 0 3 0 0 0 0 0 9 0 1040.5138 Q15738 Q15738 16 24 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2;3 0.0017265 132.76 By MS/MS 7.75 0.829 2 1 1 4 12245000 12245000 0 13795 1515 14639 34936;34937;34938;34939 24639;24640;24641 24641 3 345190 0 THLTEDTPKVNADIEK MEPAVSEPMRDQVARTHLTEDTPKVNADIE HLTEDTPKVNADIEKVNQNQAKRCTVIGGS R T H E K V 1 0 1 2 0 0 2 0 1 1 1 2 0 0 1 0 3 0 0 1 0 0 16 1 1809.9109 Q15738 Q15738 16 31 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3 0.0098392 79.346 By MS/MS 8 0.816 1 1 1 3 14731000 14731000 0 13796 1515 14640 34940;34941;34942 24642 24642 1 477160 0 THLTEDTPKVNADIEKVNQNQAK MEPAVSEPMRDQVARTHLTEDTPKVNADIE KVNADIEKVNQNQAKRCTVIGGSGFLGQHM R T H A K R 2 0 3 2 0 2 2 0 1 1 1 3 0 0 1 0 3 0 0 2 0 0 23 2 2592.3144 Q15738 Q15738 16 38 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 3;4 0.039669 47.822 By MS/MS 7 0 2 2 4024100 4024100 0 13797 1515 14641 34943;34944 24643;24644 24643 2 71912 0 THPQWYPAR EPHATIAEIKNLFTKTHPQWYPARQSLRLD KNLFTKTHPQWYPARQSLRLDPKGKSLKDE K T H A R Q 1 1 0 0 0 1 0 0 1 0 0 0 0 0 2 0 1 1 1 0 0 0 9 0 1154.5621 Q9NZ01 Q9NZ01 39 47 TECR Very-long-chain enoyl-CoA reductase yes yes 3 0.004173 98.033 By MS/MS 1 0 1 1 306510 306510 0 13798 2703 14642 34945 24645 24645 1 14975 0 THSDQFLVAFK MLVGIGDKIRGILYRTHSDQFLVAFKEVGR ILYRTHSDQFLVAFKEVGRKPPTFGDASVI R T H F K E 1 0 0 1 0 1 0 0 1 0 1 1 0 2 0 1 1 0 0 1 0 0 11 0 1291.6561 P36542 P36542 144 154 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 2;3 1.8844E-17 232.72 By MS/MS By MS/MS 8.71 0.881 4 1 2 6 1 45803000 45721000 82339 13799 805 14643 34946;34947;34948;34949;34950;34951;34952 24646;24647;24648;24649;24650;24651 24647 6 3815400 702460 THTDTESEASILGDSGEYK LRVCFGMLPKSKTSKTHTDTESEASILGDS TESEASILGDSGEYKMILVVRNDLKMGKGK K T H Y K M 1 0 0 2 0 0 3 2 1 1 1 1 0 0 0 3 3 0 1 0 0 0 19 0 2038.8967 Q9Y3E5 Q9Y3E5 48 66 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 2 3.7815E-44 256.57 By MS/MS 9.5 0.5 1 1 2 410640 410640 0 13800 2936 14644 34953;34954 24652 24652 1 287170 0 THVADFAPEVAWVTR YFPMFVSQSALEKEKTHVADFAPEVAWVTR THVADFAPEVAWVTRSGKTELAEPIAIRPT K T H T R S 3 1 0 1 0 0 1 0 1 0 0 0 0 1 1 0 2 1 0 3 0 0 15 0 1697.8526 P07814 P07814 1092 1106 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.00014853 134.99 By MS/MS 3.33 0.471 2 1 3 801490 801490 0 13801 493 14645 34955;34956;34957 24653;24654 24654 2 21023 0 THVGSYK NRYIEIFPSRRNEVRTHVGSYKGKKIASFP PSRRNEVRTHVGSYKGKKIASFPTAKYITE R T H Y K G 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 1 1 0 0 7 0 790.39735 Q12849 Q12849 331 337 GRSF1 G-rich sequence factor 1 yes yes 2 0.042356 106.42 By MS/MS 7 0.816 1 1 1 3 3852200 3852200 0 13802 1310 14646 34958;34959;34960 24655 24655 1 36686 0 THYQADIER GLVTDAFKLKRKELKTHYQADIERMYGRK_ KRKELKTHYQADIERMYGRK__________ K T H E R M 1 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1131.5309 O95573 O95573 707 715 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 3 0.0090857 105.2 By MS/MS By matching 5 0 2 1 1 1734300 1718300 15943 13803 400 14647 34961;34962 24656 24656 1 70630 47176 TIAALLPCLLDK CVKMCDPAKGAAGQRTIAALLPCLLDKGMM GQRTIAALLPCLLDKGMMSTVTEVRALSIN R T I D K G 2 0 0 1 1 0 0 0 0 1 4 1 0 0 1 0 1 0 0 0 0 0 12 0 1326.7581 Q5VYK3 Q5VYK3 1250 1261 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0020024 121.9 By MS/MS 3 0 1 1 81508 81508 0 13804 1657 14648 34963 24657 24657 1 2127.8 0 TIAECLADELINAAK LLCTGAREAAFRNIKTIAECLADELINAAK TIAECLADELINAAKGSSNSYAIKKKDELE K T I A K G 4 0 1 1 1 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 15 0 1630.8236 P46782 P46782 168 182 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.00029528 164.81 By MS/MS 9 0 1 1 1960800 1960800 0 13805 888 14649 34964 24658 24658 1 1125300 0 TIAIIAEGIPEALTR AYDSTMETMNYAQIRTIAIIAEGIPEALTR TIAIIAEGIPEALTRKLIKKADQKGVTIIG R T I T R K 3 1 0 0 0 0 2 1 0 4 1 0 0 0 1 0 2 0 0 0 0 0 15 0 1566.8981 P53396 P53396 593 607 ACLY ATP-citrate synthase yes yes 2;3 3.9242E-29 249.2 By MS/MS 3.5 1.5 1 1 2 2 1 1 8 27920000 27920000 0 13806 1001 14650 34965;34966;34967;34968;34969;34970;34971;34972 24659;24660;24661;24662;24663;24664;24665;24666 24662 8 736030 0 TIALNGVEDVR NSDDRVLLDLSAFLKTIALNGVEDVRTVLE AFLKTIALNGVEDVRTVLEHYALEDDPLAA K T I V R T 1 1 1 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1185.6354 Q3ZCQ8 Q3ZCQ8 285 295 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 6.8003E-17 231.42 By MS/MS 8 0.816 1 1 1 3 78751000 78751000 0 13807 1573 14651 34973;34974;34975 24667;24668;24669 24667 3 2632000 0 TIAMDGTEGLVR LVLEVAQHLGESTVRTIAMDGTEGLVRGQK TVRTIAMDGTEGLVRGQKVLDSGAPIKIPV R T I V R G 1 1 0 1 0 0 1 2 0 1 1 0 1 0 0 0 2 0 0 1 0 0 12 0 1261.6336 P06576 P06576 110 121 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 8.0475E-11 197.79 By MS/MS By MS/MS 6.67 0.816 5 2 2 7 2 46468000 46209000 259140 13808 478 14652;14653 34976;34977;34978;34979;34980;34981;34982;34983;34984 24670;24671;24672;24673;24674;24675;24676;24677 24670 271 8 511800 794770 TIAQAVYGAK QFLYDVQVPIVDKIRTIAQAVYGAKDIELS VDKIRTIAQAVYGAKDIELSPEAQAKIDRY R T I A K D 3 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1020.5604 Q6UB35 Q6UB35 871 880 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.00040491 148.69 By MS/MS By MS/MS 5.7 2.69 1 1 2 1 1 1 1 1 1 9 1 24781000 24295000 485920 13809 1726 14654 34985;34986;34987;34988;34989;34990;34991;34992;34993;34994 24678;24679;24680;24681;24682;24683 24681 6 873420 1015400 TIAQDYGVLK GLGPMNIPLVSDPKRTIAQDYGVLKADEGI SDPKRTIAQDYGVLKADEGISFRGLFIIDD R T I L K A 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1106.5972 Q06830 Q06830 111 120 PRDX1 Peroxiredoxin-1 yes yes 2 0.00092394 126.39 By MS/MS 8.5 0.5 1 1 2 6695700 6695700 0 13810 1277 14655 34995;34996 24684 24684 1 3723500 0 TIAQGNLSNTDVQAAK TAAGDVIKAAYNQVKTIAQGNLSNTDVQAA IAQGNLSNTDVQAAKNKLKAGYLMSVESSE K T I A K N 3 0 2 1 0 2 0 1 0 1 1 1 0 0 0 1 2 0 0 1 0 0 16 0 1629.8322 P22695 P22695 360 375 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2 2.0675E-38 292.76 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 4 1 100680000 100600000 75603 13811 662 14656 34997;34998;34999;35000;35001 24685;24686;24687 24686 3 2093500 310370 TIATSQNR YIKLRKIRAAQNISKTIATSQNRIYLTADN AAQNISKTIATSQNRIYLTADNLVLNLQDE K T I N R I 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 8 0 889.46174 Q99623 Q99623 263 270 PHB2 Prohibitin-2 yes yes 2 0.0050827 136.8 By MS/MS 8 0 1 1 26071000 26071000 0 13812 2277 14657 35002 24688 24688 1 1719900 0 TIAVDFASEDIYDK QVSSEIKEKFKVETRTIAVDFASEDIYDKI RTIAVDFASEDIYDKIKTGLAGLEIGILVN R T I D K I 2 0 0 3 0 0 1 0 0 2 0 1 0 1 0 1 1 0 1 1 0 0 14 0 1585.7512 Q53GQ0 Q53GQ0 104 117 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 1.7272E-25 234.3 By MS/MS 9 0.816 1 1 1 3 5036200 5036200 0 13813 1584 14658 35003;35004;35005 24689;24690 24689 2 456710 0 TIAVDFASEDIYDKIK QVSSEIKEKFKVETRTIAVDFASEDIYDKI IAVDFASEDIYDKIKTGLAGLEIGILVNNV R T I I K T 2 0 0 3 0 0 1 0 0 3 0 2 0 1 0 1 1 0 1 1 0 0 16 1 1826.9302 Q53GQ0 Q53GQ0 104 119 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 1.8785E-06 158.86 By MS/MS 8 0 1 1 2652300 2652300 0 13814 1584 14659 35006 24691 24691 1 174970 0 TIDGILLLIER LFRAHIISDQKVQNKTIDGILLLIERERNG VQNKTIDGILLLIERERNGEAIDRSLLRSL K T I E R E 0 1 0 1 0 0 1 1 0 3 3 0 0 0 0 0 1 0 0 0 0 0 11 0 1254.7547 Q13620;Q13619 Q13620 346 356 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.00019719 155.06 By MS/MS 5 0.816 1 1 1 3 222030 222030 0 13815 1390 14660 35007;35008;35009 24692;24693 24693 2 3971.7 0 TIDQIHK RGSNWVPRRGDQGPKTIDQIHKEAEMEEHR RRGDQGPKTIDQIHKEAEMEEHREHIKVQQ K T I H K E 0 0 0 1 0 1 0 0 1 2 0 1 0 0 0 0 1 0 0 0 0 0 7 0 853.46577 Q04637 Q04637 1001 1007 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.020039 126.28 By MS/MS 2.5 1.12 1 1 1 1 4 4721800 4721800 0 13816 1264 14661 35010;35011;35012;35013 24694 24694 1 225070 0 TIEAEAAHGTVTR SLGLMTSVLVCPDGKTIEAEAAHGTVTRHY GKTIEAEAAHGTVTRHYREHQKGRPTSTNP K T I T R H 3 1 0 0 0 0 2 1 1 1 0 0 0 0 0 0 3 0 0 1 0 0 13 0 1354.6841 P48735 P48735 341 353 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 0.00092257 132.32 By MS/MS 7 0 1 1 3028500 3028500 0 13817 912 14662 35014 24695 24695 1 54119 0 TIEALMDR LKAMQRPETAATLKRTIEALMDRGAIVRDL TAATLKRTIEALMDRGAIVRDLENLGERAL R T I D R G 1 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 8 0 947.47462 P82932 P82932 25 32 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 2 0.0087241 124.08 By MS/MS 10 0 2 2 914220 914220 0 13818 1210 14663;14664 35015;35016 24696;24697 24697 994 2 971720 0 TIECISLIGLAVGK VENAVQKELRLLRGKTIECISLIGLAVGKE KTIECISLIGLAVGKEKFMQDASDVMQLLL K T I G K E 1 0 0 0 1 0 1 2 0 3 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1472.8273 O00410 O00410 557 570 IPO5 Importin-5 yes yes 2 4.9899E-08 185.77 By MS/MS 5 0.816 1 1 1 3 877250 877250 0 13819 91 14665 35017;35018;35019 24698;24699 24698 2 13025 0 TIEDDLVSALVR GYHGMQRNVGSSQFKTIEDDLVSALVRSGC QFKTIEDDLVSALVRSGCIPENHGEDMRKM K T I V R S 1 1 0 2 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 2 0 0 12 0 1329.714 Q9Y606 Q9Y606 111 122 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 2 1.4904E-16 221.52 By MS/MS 6.5 0.5 1 1 2 4413300 4413300 0 13820 2992 14666 35020;35021 24700;24701 24700 2 77393 0 TIEESEETLKNTK SSYHKQQEELDALKKTIEESEETLKNTKEI KKTIEESEETLKNTKEIQRKAEEKYEVLEN K T I T K E 0 0 1 0 0 0 4 0 0 1 1 2 0 0 0 1 3 0 0 0 0 0 13 1 1520.757 O95347 O95347 751 763 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 2.1502E-07 211.63 By MS/MS 3 0 1 1 1420000 1420000 0 13821 385 14667 35022 24702 24702 1 37070 0 TIEKFEK TTGHLIYKCGGIDKRTIEKFEKEAAEMGKG KCGGIDKRTIEKFEKEAAEMGKGSFKYAWV R T I E K E 0 0 0 0 0 0 2 0 0 1 0 2 0 1 0 0 1 0 0 0 0 0 7 1 893.48583 Q5VTE0;P68104;Q05639 Q5VTE0 38 44 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 1;2 0.048108 171.38 By MS/MS By matching 5 2.67 1 1 1 3 1 6 1 49336000 49272000 63745 13822 1184 14668 35023;35024;35025;35026;35027;35028;35029 24703;24704;24705 24703 2 1028500 261690 TIEKFEKEAAEMGK TTGHLIYKCGGIDKRTIEKFEKEAAEMGKG RTIEKFEKEAAEMGKGSFKYAWVLDKLKAE R T I G K G 2 0 0 0 0 0 4 1 0 1 0 3 1 1 0 0 1 0 0 0 0 0 14 2 1609.8022 Q5VTE0;P68104;Q05639 Q5VTE0 38 51 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 0.00073304 149.57 By MS/MS 7 0.632 1 3 1 5 10589000 10589000 0 13823 1184 14669;14670 35030;35031;35032;35033;35034 24706;24707;24708 24708 923 3 200200 0 TIELDGKTIK TESYISTIGVDFKIRTIELDGKTIKLQIWD DFKIRTIELDGKTIKLQIWDTAGQERFRTI R T I I K L 0 0 0 1 0 0 1 1 0 2 1 2 0 0 0 0 2 0 0 0 0 0 10 1 1116.639 P62820;Q9H0U4 Q9H0U4 49 58 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 2 0.0064723 128.6 By MS/MS 9 0 1 1 1130400 1130400 0 13824 1145;2459 14671 35035 24709 24709 1 648770 0 TIELSDDDFLGECECTLGQIVSSK VVQKLKFGVYDIDNKTIELSDDDFLGECEC LGECECTLGQIVSSKKLTRPLVMKTGRPAG K T I S K K 0 0 0 3 2 1 3 2 0 2 3 1 0 1 0 3 2 0 0 1 0 0 24 0 2715.2255 O75131 O75131 86 109 CPNE3 Copine-3 yes yes 3 8.026E-05 90.308 By MS/MS 6 0 1 1 970930 970930 0 13825 282 14672 35036 24710 24710 1 7571.4 0 TIEQIHK RLCNWVSRRADQGPKTIEQIHKEAKIEEQE RRADQGPKTIEQIHKEAKIEEQEEQRKVQQ K T I H K E 0 0 0 0 0 1 1 0 1 2 0 1 0 0 0 0 1 0 0 0 0 0 7 0 867.48142 O43432 O43432 995 1001 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.039937 108.09 By MS/MS 2.5 0.5 1 1 2 448690 448690 0 13826 200 14673 35037;35038 24711 24711 1 20615 0 TIEQNINNLNVSEADRK TTKKAVKPKKKHLHRTIEQNINNLNVSEAD EQNINNLNVSEADRKCEIDPMFQKTAASFD R T I R K C 1 1 4 1 0 1 2 0 0 2 1 1 0 0 0 1 1 0 0 1 0 0 17 1 1956.9865 Q15003 Q15003 222 238 NCAPH Condensin complex subunit 2 yes yes 3 0.050513 59.606 By MS/MS 4 0 1 1 1737900 1737900 0 13827 1457 14674 35039 24712 24712 1 47443 0 TIESANQQTDK AYCEYRLNRIENALKTIESANQQTDKLKEL NALKTIESANQQTDKLKELYGQVLYRLERY K T I D K L 1 0 1 1 0 2 1 0 0 1 0 1 0 0 0 1 2 0 0 0 0 0 11 0 1233.5837 O76094 O76094 100 110 SRP72 Signal recognition particle subunit SRP72 yes yes 2 1.1542E-10 201.61 By MS/MS 5 0 1 1 470490 470490 0 13828 346 14675 35040 24713 24713 1 19339 0 TIESANQQTDKLK AYCEYRLNRIENALKTIESANQQTDKLKEL LKTIESANQQTDKLKELYGQVLYRLERYDE K T I L K E 1 0 1 1 0 2 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 13 1 1474.7627 O76094 O76094 100 112 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.045256 91.701 By MS/MS 5 0 1 1 755600 755600 0 13829 346 14676 35041 24714 24714 0 31058 0 TIESETVR LEESDVLQEARRKYKTIESETVRTSEVLRK EARRKYKTIESETVRTSEVLRKKLGELTGT K T I V R T 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 2 0 0 1 0 0 8 0 933.47673 O43615 O43615 106 113 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.0041502 141.39 By MS/MS By matching 7.33 0.471 2 1 2 1 16923000 16875000 47573 13830 209 14677 35042;35043;35044 24715;24716 24715 2 355230 195290 TIETSPSLSR ILMDSYGPKKVLDGKTIETSPSLSRMPNQH VLDGKTIETSPSLSRMPNQHACKLGANILL K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 Q9NVI1 Q9NVI1 403 412 FANCI Fanconi anemia group I protein yes yes 2 0.03173 100.25 By MS/MS 3 0 1 1 1045900 1045900 0 13831 2654 14678 35045 24717 24717 1 27304 0 TIEVLQLQDQGSK SLSIKVEESYAMPTKTIEVLQLQDQGSKML TKTIEVLQLQDQGSKMLLDSVLTTHERVVQ K T I S K M 0 0 0 1 0 3 1 1 0 1 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1457.7726 Q96GC5 Q96GC5 131 143 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2 4.4161E-46 281.17 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 6236100 6124200 111840 13832 2179 14679 35046;35047;35048 24718;24719;24720 24720 3 3545600 1205300 TIEYLQPNPASR KVDVTSKAVTEVLARTIEYLQPNPASRAKL LARTIEYLQPNPASRAKLTMLNTVSKIRGQ R T I S R A 1 1 1 0 0 1 1 0 0 1 1 0 0 0 2 1 1 0 1 0 0 0 12 0 1387.7096 Q99961;Q99962 Q99961 54 65 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 yes no 2 0.0038511 111.86 By MS/MS 7 0 1 1 1391200 1391200 0 13833 2299 14680 35049 24721 24721 1 24860 0 TIFQGIAAK SLMPGGNKEAWPHIKTIFQGIAAKVGTGEP AWPHIKTIFQGIAAKVGTGEPCCDWVGDEG K T I A K V 2 0 0 0 0 1 0 1 0 2 0 1 0 1 0 0 1 0 0 0 0 0 9 0 947.54402 P52209 P52209 155 163 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.00047068 163.15 By MS/MS 6.5 1.12 1 1 1 1 4 19324000 19324000 0 13834 981 14681 35050;35051;35052;35053 24722;24723 24722 2 223360 0 TIGGGDDSFNTFFSETGAGK LEHGIQPDGQMPSDKTIGGGDDSFNTFFSE DDSFNTFFSETGAGKHVPRAVFVDLEPTVI K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 P68363 41 60 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2;3 2.6111E-186 407.09 By MS/MS By matching 6.5 1.96 1 1 1 1 9 4 3 3 1 23 1 1243300000 1243100000 223180 13835 1185;1754;2314 14682 35054;35055;35056;35057;35058;35059;35060;35061;35062;35063;35064;35065;35066;35067;35068;35069;35070;35071;35072;35073;35074;35075;35076;35077 24724;24725;24726;24727;24728;24729;24730;24731;24732;24733;24734;24735;24736;24737;24738;24739;24740 24734 17 15187000 684480 TIGGGDDSFNTFFSETGAGKHVPR LEHGIQPDGQMPSDKTIGGGDDSFNTFFSE NTFFSETGAGKHVPRAVFVDLEPTVIDEVR K T I P R A 1 1 1 2 0 0 1 5 1 1 0 1 0 3 1 2 3 0 0 1 0 0 24 1 2496.167 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 P68363 41 64 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2;3;4 6.0441E-05 115.5 By MS/MS 5.75 0.433 1 3 4 143200000 143200000 0 13836 1185;1754;2314 14683 35078;35079;35080;35081 24741;24742;24743 24741 3 1121200 0 TIGISVDPR LEELRVAGIHKKVARTIGISVDPRRRNKST HKKVARTIGISVDPRRRNKSTESLQANVQR R T I P R R 0 1 0 1 0 0 0 1 0 2 0 0 0 0 1 1 1 0 0 1 0 0 9 0 956.5291 P26373 P26373 93 101 RPL13 60S ribosomal protein L13 yes yes 2 0.037807 86.67 By MS/MS By matching 8 0 2 1 1 2515400 2420400 95024 13837 695 14684 35082;35083 24744 24744 1 159670 810670 TIGTGLVTNTLAMTEEEK ILEKGQRFTLRDGNRTIGTGLVTNTLAMTE TGLVTNTLAMTEEEKNIKWG__________ R T I E K N 1 0 1 0 0 0 3 2 0 1 2 1 1 0 0 0 5 0 0 1 0 0 18 0 1906.9558 P49411 P49411 430 447 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 1.093E-98 340.92 By MS/MS By MS/MS 7.78 1.03 5 2 1 1 8 1 72270000 72215000 55466 13838 918 14685;14686 35084;35085;35086;35087;35088;35089;35090;35091;35092 24745;24746;24747;24748;24749;24750;24751;24752;24753;24754 24753 684 10 2466400 227700 TIGTGLVTNTLAMTEEEKNIK ILEKGQRFTLRDGNRTIGTGLVTNTLAMTE VTNTLAMTEEEKNIKWG_____________ R T I I K W 1 0 2 0 0 0 3 2 0 2 2 2 1 0 0 0 5 0 0 1 0 0 21 1 2262.1777 P49411 P49411 430 450 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.00075751 84.035 By MS/MS 8 1.41 1 1 1 1 1 5 56571000 56571000 0 13839 918 14687;14688 35093;35094;35095;35096;35097 24755;24756;24757 24756 684 3 1343300 0 TIHAELSK IPILRAALKLEPSNKTIHAELSKLVKKHAA KLEPSNKTIHAELSKLVKKHAAQRSTETAL K T I S K L 1 0 0 0 0 0 1 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 8 0 897.49198 Q14318 Q14318 341 348 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 3 0.053342 88.177 By MS/MS By matching 6 0 2 1 1 2718300 2708500 9778.5 13840 1428 14689 35098;35099 24758 24758 1 21121 29990 TIHTSTGK AFRKNPSDPKLAHLKTIHTSTGKNLLVSGW PKLAHLKTIHTSTGKNLLVSGWWGFVRHPN K T I G K N 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 1 3 0 0 0 0 0 8 0 843.44503 Q14739 Q14739 525 532 LBR Lamin-B receptor yes yes 2 0.0080258 125.81 By MS/MS 1.5 0.5 1 1 2 656310 656310 0 13841 1445 14690 35100;35101 24759;24760 24759 2 32265 0 TIIGQQGDQSCANK ENLLWVDKYKPTSLKTIIGQQGDQSCANKL KTIIGQQGDQSCANKLLRWLRNWQKSSSED K T I N K L 1 0 1 1 1 3 0 2 0 2 0 1 0 0 0 1 1 0 0 0 0 0 14 0 1518.7097 P35251 P35251 597 610 RFC1 Replication factor C subunit 1 yes yes 2 3.644E-35 260.57 By MS/MS 3 0 1 1 659910 659910 0 13842 787 14691 35102 24761 24761 1 17227 0 TIIIEDNRSQDD DFRYIFVEIESYPRRTIIIEDNRSQDD___ PRRTIIIEDNRSQDD_______________ R T I D D - 0 1 1 3 0 1 1 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 12 1 1417.6685 Q9BVV7 Q9BVV7 237 248 TIMM21 Mitochondrial import inner membrane translocase subunit Tim21 yes yes 2 3.9726E-23 242.97 By MS/MS 9.5 0.5 1 1 2 2075100 2075100 0 13843 2386 14692 35103;35104 24762 24762 1 1207400 0 TIIPLISQCTPK PARVNVPVIGGHAGKTIIPLISQCTPKVDF AGKTIIPLISQCTPKVDFPQDQLTALTGRI K T I P K V 0 0 0 0 1 1 0 0 0 3 1 1 0 0 2 1 2 0 0 0 0 0 12 0 1369.7639 P40926 P40926 204 215 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.029554 80.69 By MS/MS 9 0.816 1 1 1 3 4456100 4456100 0 13844 832 14693 35105;35106;35107 24763;24764 24764 2 402620 0 TIIPWDVDTICK AKEKLGVSCEVIDLRTIIPWDVDTICKSVI DLRTIIPWDVDTICKSVIKTGRLLISHEAP R T I C K S 0 0 0 2 1 0 0 0 0 3 0 1 0 0 1 0 2 1 0 1 0 0 12 0 1459.7381 P21953 P21953 306 317 BCKDHB 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes yes 2 0.013101 93.556 By MS/MS 7.5 0.5 1 1 2 740280 740280 0 13845 652 14694 35108;35109 24765 24765 1 42415 0 TIIQNPTDQQK MLSHQLKQHVIDGEKTIIQNPTDQQKKDHE DGEKTIIQNPTDQQKKDHEKAEFEVHEVYA K T I Q K K 0 0 1 1 0 3 0 0 0 2 0 1 0 0 1 0 2 0 0 0 0 0 11 0 1284.6674 Q9UQ80 Q9UQ80 200 210 PA2G4 Proliferation-associated protein 2G4 yes yes 2 9.5056E-07 178.84 By MS/MS 7 0 1 1 1668500 1668500 0 13846 2859 14695 35110 24766 24766 1 29816 0 TIISLDTSQMNR TSVSYGLMCPADETRTIISLDTSQMNRILW ETRTIISLDTSQMNRILWVDENNLTAHVEA R T I N R I 0 1 1 1 0 1 0 0 0 2 1 0 1 0 0 2 2 0 0 0 0 0 12 0 1377.6922 O00116 O00116 254 265 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes yes 2 3.4267E-44 285.28 By MS/MS By matching 5 0 3 2 1 3362400 3324300 38076 13847 67 14696;14697 35111;35112;35113 24767;24768;24769;24770 24769 41 4 136640 112670 TIISYIDEQFER TPGYGDAINCRDCFKTIISYIDEQFERYLH CFKTIISYIDEQFERYLHDESGLNRRHIID K T I E R Y 0 1 0 1 0 1 2 0 0 3 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1512.746 Q15019 Q15019 117 128 SEPT2 Septin-2 yes yes 2 0.0010875 132.32 By MS/MS 7 0 1 1 147960 147960 0 13848 1462 14698 35114 24771 24771 1 2644 0 TIKEVAEAYR GTPVFKLPKWRVKGKTIKEVAEAYRSVGAE RVKGKTIKEVAEAYRSVGAELNVLPFCTQF K T I Y R S 2 1 0 0 0 0 2 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 1 1178.6295 Q3SY69 Q3SY69 87 96 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.048058 102.53 By MS/MS 4 0 1 1 1222400 1222400 0 13849 1570 14699 35115 24772 24772 1 33370 0 TILDANEEFK QQSEEAMQSLVTSSRTILDANEEFKSMSGT VTSSRTILDANEEFKSMSGTIQLGRKLITK R T I F K S 1 0 1 1 0 0 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 10 0 1178.5819 Q12981 Q12981 169 178 BNIP1 Vesicle transport protein SEC20 yes yes 2 0.0018633 117.71 By MS/MS 8.5 0.5 1 1 2 3384400 3384400 0 13850 1321 14700 35116;35117 24773;24774 24774 2 481830 0 TILDPLTLVQGNQNEDK EELKSKNLSLESQIKTILDPLTLVQGNQNE LDPLTLVQGNQNEDKHLVTDNPSKINPETV K T I D K H 0 0 2 2 0 2 1 1 0 1 3 1 0 0 1 0 2 0 0 1 0 0 17 0 1896.9793 Q5W0B1 Q5W0B1 126 142 RNF219 RING finger protein 219 yes yes 2 0.001603 145.61 By MS/MS 4.5 0.5 1 1 2 305060 305060 0 13851 1661 14701 35118;35119 24775 24775 1 9025.8 0 TILEEEITPTIQK QKTIEKKEAKLKEIKTILEEEITPTIQKLK IKTILEEEITPTIQKLKEERSSYLEYQKVM K T I Q K L 0 0 0 0 0 1 3 0 0 3 1 1 0 0 1 0 3 0 0 0 0 0 13 0 1513.8239 O95347 O95347 197 209 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 1.4137E-34 253.71 By MS/MS 3 0 1 1 7212000 7212000 0 13852 385 14702 35120 24776 24776 1 188270 0 TILESNDVPGMLAYSLK IGIALETRRLDVFEKTILESNDVPGMLAYS LESNDVPGMLAYSLKLCMSLMQNKQFRNKV K T I L K L 1 0 1 1 0 0 1 1 0 1 3 1 1 0 1 2 1 0 1 1 0 0 17 0 1849.9496 Q99460 Q99460 166 182 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 9.0196E-19 206.18 By MS/MS 4 0 2 2 1223700 1223700 0 13853 2268 14703;14704 35121;35122 24777;24778 24777 1427 2 33406 0 TILKDATLTALDR MGAGIAQVSVDKGLKTILKDATLTALDRGQ LKTILKDATLTALDRGQQQVFKGLNDKVKK K T I D R G 2 1 0 2 0 0 0 0 0 1 3 1 0 0 0 0 3 0 0 0 0 0 13 1 1429.814 P40939 P40939 387 399 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 0.0031885 106.32 By MS/MS 5.5 0.5 2 2 4 12411000 12411000 0 13854 835 14705 35123;35124;35125;35126 24779;24780 24780 2 436470 0 TILPAAAQDVYYR QRQPDSGISSIRSFKTILPAAAQDVYYRDE FKTILPAAAQDVYYRDEIGNVSTSHLLILD K T I Y R D 3 1 0 1 0 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 0 0 13 0 1479.7722 P04843 P04843 282 294 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0010757 130.44 By MS/MS 2.75 1.48 1 1 1 1 4 4485400 4485400 0 13855 458 14706 35127;35128;35129;35130 24781;24782 24782 2 184740 0 TILSLMTR YSGAPSEQQTYDYAKTILSLMTREKHPDGK QTYDYAKTILSLMTREKHPDGKILIIGGSI K T I T R E 0 1 0 0 0 0 0 0 0 1 2 0 1 0 0 1 2 0 0 0 0 0 8 0 933.53174 P53396 P53396 322 329 ACLY ATP-citrate synthase yes yes 2 0.001052 174.52 By MS/MS By matching 4 0.632 1 3 1 4 1 11683000 11667000 16021 13856 1001 14707;14708 35131;35132;35133;35134;35135 24783;24784 24784 766 2 322600 33477 TILTLTGVSTLGDVK RLDTDILLGATCGLKTILTLTGVSTLGDVK TILTLTGVSTLGDVKNNQESDCVSKKKMVP K T I V K N 0 0 0 1 0 0 0 2 0 1 3 1 0 0 0 1 4 0 0 2 0 0 15 0 1516.8712 A6NDG6 A6NDG6 276 290 PGP Phosphoglycolate phosphatase yes yes 2 3.4995E-14 198.32 By MS/MS 8 0 1 1 345840 345840 0 13857 20 14709 35136 24785 24785 1 22815 0 TINEVENQILTR HIRVGWEQLLTTIARTINEVENQILTRDAK IARTINEVENQILTRDAKGISQEQMQEFRA R T I T R D 0 1 2 0 0 1 2 0 0 2 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1428.7573 P12814;O43707 O43707 746 757 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 2 4.5225E-11 205.07 By MS/MS 4 0.816 1 1 1 3 5389000 5389000 0 13858 217;568 14710 35137;35138;35139 24786 24786 1 154970 0 TINQIRQDAVK HHWVPRKAFLDNGPKTINQIRQDAVKDLGV NGPKTINQIRQDAVKDLGVFIPAPMAQGMR K T I V K D 1 1 1 1 0 2 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 11 1 1284.715 P78344 P78344 322 332 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.035706 108.43 By MS/MS 4 0 1 1 548130 548130 0 13859 1192 14711 35140 24787 24787 1 14963 0 TIPIDGDFFSYTR CLRYYAGWADKYHGKTIPIDGDFFSYTRHE GKTIPIDGDFFSYTRHEPVGVCGQIIPWNF K T I T R H 0 1 0 2 0 0 0 1 0 2 0 0 0 2 1 1 2 0 1 0 0 0 13 0 1530.7355 P05091 P05091 160 172 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.052403 78.903 By MS/MS 7 0.816 1 1 1 3 8354600 8354600 0 13860 467 14712 35141;35142;35143 24788 24788 1 86076 0 TIQEADQDGDSAISFTEFVK GVNISDEQLGSIADRTIQEADQDGDSAISF DQDGDSAISFTEFVKVLEKVDVEQKMSIRF R T I V K V 2 0 0 3 0 2 2 1 0 2 0 1 0 2 0 2 2 0 0 1 0 0 20 0 2200.0172 Q99653 Q99653 159 178 CHP1 Calcineurin B homologous protein 1 yes yes 2;3 3.4727E-24 235.4 By MS/MS 9 0 2 2 1419100 1419100 0 13861 2281 14713 35144;35145 24789;24790 24789 2 814450 0 TIQFVDWCPTGFK PKDVNAAIATIKTKRTIQFVDWCPTGFKVG KRTIQFVDWCPTGFKVGINYQPPTVVPGGD R T I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 0 2 1 0 1 0 0 13 0 1597.7599 Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 Q71U36 340 352 TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 2 0.00021602 148.18 By MS/MS 6.75 0.829 2 1 1 4 178010000 178010000 0 13862 1754;2314 14714 35146;35147;35148;35149 24791;24792;24793;24794 24793 4 1389100 0 TIQGDEEDLR RLDQWLTTMLLRIKKTIQGDEEDLR_____ LRIKKTIQGDEEDLR_______________ K T I L R - 0 1 0 2 0 1 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1174.5466 P54920 P54920 286 295 NAPA Alpha-soluble NSF attachment protein yes yes 2 0.014439 96.229 By MS/MS 8 0 1 1 1294900 1294900 0 13863 1020 14715 35150 24795 24795 1 85425 0 TIQVDNTDAEGR KANKPGDVVRAKNGKTIQVDNTDAEGRLIL NGKTIQVDNTDAEGRLILADALCYAHTFNP K T I G R L 1 1 1 2 0 1 1 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 12 0 1317.6161 P28838 P28838 357 368 LAP3 Cytosol aminopeptidase yes yes 2 5.2779E-07 179.94 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 13243000 13217000 25919 13864 722 14716 35151;35152;35153;35154 24796;24797;24798 24797 3 129480 79492 TIRYPDPLIK VGTKGIPHLVTHDARTIRYPDPLIKVNDTI THDARTIRYPDPLIKVNDTIQIDLETGKIT R T I I K V 0 1 0 1 0 0 0 0 0 2 1 1 0 0 2 0 1 0 1 0 0 0 10 1 1214.7023 P62701;Q8TD47 P62701 146 155 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 3 0.00087509 128.51 By MS/MS By matching 8.33 0.471 2 1 2 1 3304900 3256800 48097 13865 1140 14717 35155;35156;35157 24799 24799 1 242940 410330 TISHVIIGLK LTPCETENPMGGYGKTISHVIIGLKTAKGT GGYGKTISHVIIGLKTAKGTKQLKLDPSIF K T I L K T 0 0 0 0 0 0 0 1 1 3 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1079.6703 Q9Y265 Q9Y265 153 162 RUVBL1 RuvB-like 1 yes yes 2;3 0.00039842 166.68 By MS/MS 6 0 2 2 16909000 16909000 0 13866 2870 14718 35158;35159 24800;24801 24801 2 131860 0 TISSLEEIVEK IYAYPSNITSETGFRTISSLEEIVEKQGDT TGFRTISSLEEIVEKQGDTIEYLKRHNALL R T I E K Q 0 0 0 0 0 0 3 0 0 2 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1246.6656 Q8IY95 Q8IY95 227 237 TMEM192 Transmembrane protein 192 yes yes 2 6.693E-06 175.93 By MS/MS 8 0 1 1 1230300 1230300 0 13867 1878 14719 35160 24802 24802 1 81164 0 TISSYTAFSR EPQMVLFNLYDDWLKTISSYTAFSRLILIL DDWLKTISSYTAFSRLILILRALHVNNDRA K T I S R L 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 2 0 1 0 0 0 10 0 1131.556 Q6P2Q9 Q6P2Q9 1926 1935 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0010678 120.31 By MS/MS 2 0 1 1 633240 633240 0 13868 1706 14720 35161 24803 24803 1 31475 0 TITLEVEPSDTIENVK ______________________________ ITLEVEPSDTIENVKAKIQDKEGIPPDQQR K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 P62979;P0CG47;P0CG48 P62979 12 27 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 2 2.5896E-63 296.28 By MS/MS By MS/MS 4.8 2.61 3 2 4 4 3 2 2 2 2 1 17 8 371550000 369870000 1673000 13869 1165 14721 35162;35163;35164;35165;35166;35167;35168;35169;35170;35171;35172;35173;35174;35175;35176;35177;35178;35179;35180;35181;35182;35183;35184;35185;35186 24804;24805;24806;24807;24808;24809;24810;24811;24812;24813;24814;24815;24816;24817;24818;24819;24820;24821;24822;24823;24824;24825;24826;24827;24828;24829;24830 24817 27 22760000 5920600 TITLEVEPSDTIENVKAK ______________________________ LEVEPSDTIENVKAKIQDKEGIPPDQQRLI K T I A K I 1 0 1 1 0 0 3 0 0 2 1 2 0 0 1 1 3 0 0 2 0 0 18 1 1986.0521 P62979;P0CG47;P0CG48 P62979 12 29 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 2;3 4.6309E-10 194.59 By MS/MS By matching 5.05 2.84 3 2 2 2 2 2 2 2 2 1 19 1 58958000 58903000 55089 13870 1165 14722 35187;35188;35189;35190;35191;35192;35193;35194;35195;35196;35197;35198;35199;35200;35201;35202;35203;35204;35205;35206 24831;24832;24833;24834;24835;24836;24837;24838;24839;24840;24841;24842;24843;24844 24836 14 3959000 55089 TITYQAVPSEVPNEEPK QVSWQPFLDGIFPAKTITYQAVPSEVPNEE TYQAVPSEVPNEEPKVATAYRPPALRNKPI K T I P K V 1 0 1 0 0 1 3 0 0 1 0 1 0 0 3 1 2 0 1 2 0 0 17 0 1900.9418 Q9BY44 Q9BY44 425 441 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 2 0.0087586 110.15 By MS/MS 6 0 1 1 3397900 3397900 0 13871 2409 14723 35207 24845 24845 1 26497 0 TIVAVEVQDQK PPEAAKDRETRPFPRTIVAVEVQDQKNGAT PFPRTIVAVEVQDQKNGATHYWTLEKLRQR R T I Q K N 1 0 0 1 0 2 1 0 0 1 0 1 0 0 0 0 1 0 0 3 0 0 11 0 1228.6663 Q12756 Q12756 783 793 KIF1A Kinesin-like protein KIF1A yes yes 2 8.7366E-08 194.06 By MS/MS 2.5 1.12 1 1 1 1 4 1576100 1576100 0 13872 1302 14724 35208;35209;35210;35211 24846 24846 1 64640 0 TIVEFECR STIKPYNAEDNENFKTIVEFECRGLEPVDF EDNENFKTIVEFECRGLEPVDFQPQAGFAA K T I C R G 0 1 0 0 1 0 2 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 8 0 1052.4961 Q9NWV4 Q9NWV4 96 103 C1orf123 UPF0587 protein C1orf123 yes yes 2 0.0068449 130.22 By MS/MS 9 0 1 1 492830 492830 0 13873 2671 14725 35212 24847 24847 1 282840 0 TIVFVETK LIRLMEEIMSEKENKTIVFVETKRRCDELT MSEKENKTIVFVETKRRCDELTRKMRRDGW K T I T K R 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 2 0 0 2 0 0 8 0 935.53278 P17844 P17844 344 351 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.029378 99.442 By MS/MS By matching 5 0 2 1 1 2851000 2838700 12237 13874 616 14726 35213;35214 24848 24848 1 116680 36209 TIVITSHPGQIVK ALCGFQKPISTLDNRTIVITSHPGQIVKHG NRTIVITSHPGQIVKHGDIKCVLNEGMPIY R T I V K H 0 0 0 0 0 1 0 1 1 3 0 1 0 0 1 1 2 0 0 2 0 0 13 0 1391.8136 P31689 P31689 284 296 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.00033064 138.76 By MS/MS 7 0.816 1 1 1 3 81544000 81544000 0 13875 755 14727 35215;35216;35217 24849;24850 24850 2 786060 0 TIVQLENEIYQIK SNWVSLVSKNYEIERTIVQLENEIYQIKQQ ERTIVQLENEIYQIKQQHGEANKENIRQDF R T I I K Q 0 0 1 0 0 2 2 0 0 3 1 1 0 0 0 0 1 0 1 1 0 0 13 0 1589.8665 O75934 O75934 198 210 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 2 2.6959E-46 284.47 By MS/MS 8 0 1 1 620160 620160 0 13876 337 14728 35218 24851 24851 1 40912 0 TIYAGNALCTVK ISDIIAIKSPDTFVRTIYAGNALCTVKCDE FVRTIYAGNALCTVKCDEKVKVFSVRGTSF R T I V K C 2 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 2 0 1 1 0 0 12 0 1309.67 P13804 P13804 147 158 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.0015802 126.71 By MS/MS 8 0 1 1 5459500 5459500 0 13877 582 14729 35219 24852 24852 1 360160 0 TKADFFEDENGQR GGQSVTMGYYKNEAKTKADFFEDENGQRWL AKTKADFFEDENGQRWLCTGDIGEFEPDGC K T K Q R W 1 1 1 2 0 1 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 13 1 1555.6903 O95573 O95573 546 558 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2;3 8.0503E-05 184.87 By MS/MS 5 0 2 2 2091500 2091500 0 13878 400 14730 35220;35221 24853;24854 24854 2 85968 0 TKDDIIICEIGDVFK KDVVVQHVHFDGLGRTKDDIIICEIGDVFK TKDDIIICEIGDVFKAKNLIEVMRKSHEAR R T K F K A 0 0 0 3 1 0 1 1 0 4 0 2 0 1 0 0 1 0 0 1 0 0 15 1 1764.8968 Q9Y512 Q9Y512 58 72 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 2;3 8.7883E-09 203.85 By MS/MS 6 0 2 2 1385800 1385800 0 13879 2962 14731 35222;35223 24855;24856 24856 2 10807 0 TKDEYLINSQTTEHIVK RQRVWGVPIPVFHHKTKDEYLINSQTTEHI DEYLINSQTTEHIVKLVEQHGSDIWWTLPP K T K V K L 0 0 1 1 0 1 2 0 1 2 1 2 0 0 0 1 3 0 1 1 0 0 17 1 2018.032 Q9NSE4 Q9NSE4 539 555 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 4 0.0052482 84.046 By MS/MS 4.5 0.5 1 1 2 5793000 5793000 0 13880 2624 14732 35224;35225 24857 24857 1 167070 0 TKDSGSISLQETR SSIDLNLSISSFLSKTKDSGSISLQETRRQ SKTKDSGSISLQETRRQKKTLKKTRKFIVD K T K T R R 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 3 2 0 0 0 0 0 13 1 1420.7158 Q9H2G2 Q9H2G2 774 786 SLK STE20-like serine/threonine-protein kinase yes yes 3 0.02817 68.033 By MS/MS By matching 2.33 0.471 2 1 2 1 576400 398440 177960 13881 2476 14733 35226;35227;35228 24858 24858 1 16403 149830 TKEEVEAAK QIALDRAERAARFAKTKEEVEAAKAAALLA AARFAKTKEEVEAAKAAALLAKQAEMEVKR K T K A K A 2 0 0 0 0 0 3 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 9 1 1003.5186 Q92575 Q92575 286 294 UBXN4 UBX domain-containing protein 4 yes yes 3 0.013696 81.525 By MS/MS 6 0 1 1 497430 497430 0 13882 2062 14734 35229 24859 24859 1 3879 0 TKEKLEVTWEK REEVDLTGSVPVHAKTKEKLEVTWEKMSKS VHAKTKEKLEVTWEKMSKSKHNGVDPEEVV K T K E K M 0 0 0 0 0 0 3 0 0 0 1 3 0 0 0 0 2 1 0 1 0 0 11 2 1389.7504 Q15031 Q15031 629 639 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.00089314 160.67 By MS/MS 4 0 1 1 393040 393040 0 13883 1467 14735 35230 24860 24860 1 10729 0 TKENVNATENCISAVGK ALPLLVRVIQSADSKTKENVNATENCISAV ENVNATENCISAVGKIMKFKPDCVNVEEVL K T K G K I 2 0 3 0 1 0 2 1 0 1 0 2 0 0 0 1 2 0 0 2 0 0 17 1 1833.8891 O00410 O00410 962 978 IPO5 Importin-5 yes yes 2;3 6.0431E-13 186.29 By MS/MS 4.75 0.829 2 1 1 4 5470600 5470600 0 13884 91 14736 35231;35232;35233;35234 24861;24862 24862 2 142590 0 TKEVYELLDSPGK TAEVLNIGKKLYEGKTKEVYELLDSPGKVL GKTKEVYELLDSPGKVLLQSKDQITAGNAA K T K G K V 0 0 0 1 0 0 2 1 0 0 2 2 0 0 1 1 1 0 1 1 0 0 13 1 1477.7664 P22234 P22234 18 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2;3 6.3219E-11 204.32 By MS/MS 6.6 1.02 1 1 2 1 5 12139000 12139000 0 13885 656 14737 35235;35236;35237;35238;35239 24863;24864 24863 2 222140 0 TKFEECRK LAIRFLNAENAQKFKTKFEECRKEIEEREK ENAQKFKTKFEECRKEIEEREKKAGSGKND K T K R K E 0 1 0 0 1 0 2 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 8 2 1096.5335 P43487 P43487 153 160 RANBP1 Ran-specific GTPase-activating protein yes yes 2 0.015927 158.07 By MS/MS 8 0 1 1 653320 653320 0 13886 865 14738 35240 24865 24865 1 43099 0 TKFENLCK LPEDEEEKKKQEEKKTKFENLCKIMKDILE KKQEEKKTKFENLCKIMKDILEKKVEKVVV K T K C K I 0 0 1 0 1 0 1 0 0 0 1 2 0 1 0 0 1 0 0 0 0 0 8 1 1038.5168 P07900;Q58FG0 P07900 566 573 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 3 0.0032147 144.12 By MS/MS 4.5 0.5 1 1 2 861420 861420 0 13887 494 14739 35241;35242 24866 24866 1 25069 0 TKFVDGVSTVAR SLKEGMFNNANVLFKTKFVDGVSTVARFTQ LFKTKFVDGVSTVARFTQCQNGKISKEAKS K T K A R F 1 1 0 1 0 0 0 1 0 0 0 1 0 1 0 1 2 0 0 3 0 0 12 1 1278.6932 O95347 O95347 1159 1170 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.021178 116.74 By MS/MS 3 0 1 1 697410 697410 0 13888 385 14740 35243 24867 24867 1 18206 0 TKHKLDVTSVEDYK KIAILTCPFEPPKPKTKHKLDVTSVEDYKA KTKHKLDVTSVEDYKALQKYEKEKFEEMIQ K T K Y K A 0 0 0 2 0 0 1 0 1 0 1 3 0 0 0 1 2 0 1 2 0 0 14 2 1661.8625 P48643 P48643 262 275 CCT5 T-complex protein 1 subunit epsilon yes yes 3 0.0085286 115.68 By MS/MS 6.5 0.5 1 1 2 9901600 9901600 0 13889 909 14741 35244;35245 24868 24868 1 80113 0 TKNETDEDGWTTVR KASWRAEKDRESLRRTKNETDEDGWTTVRR RTKNETDEDGWTTVRR______________ R T K V R R 0 1 1 2 0 0 2 1 0 0 0 1 0 0 0 0 4 1 0 1 0 0 14 1 1650.7485 Q14152 Q14152 1368 1381 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2;3 4.8433E-34 252.37 By MS/MS By matching 3.2 0.4 4 1 4 1 6204800 6148600 56228 13890 1409 14742 35246;35247;35248;35249;35250 24869;24870;24871 24870 3 160630 80586 TKNETDEDGWTTVRR KASWRAEKDRESLRRTKNETDEDGWTTVRR TKNETDEDGWTTVRR_______________ R T K R R - 0 2 1 2 0 0 2 1 0 0 0 1 0 0 0 0 4 1 0 1 0 0 15 2 1806.8497 Q14152 Q14152 1368 1382 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3;4 0.010452 84.173 By MS/MS 3.33 0.471 2 1 3 6271800 6271800 0 13891 1409 14743 35251;35252;35253 24872;24873 24872 2 163800 0 TKPTHGIGK YSVGGILLSISRPYKTKPTHGIGKYKHLIK ISRPYKTKPTHGIGKYKHLIKAEEPKKKKG K T K G K Y 0 0 0 0 0 0 0 2 1 1 0 2 0 0 1 0 2 0 0 0 0 0 9 1 937.53451 Q96GC5 Q96GC5 50 58 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 3 0.018944 98.033 By MS/MS 9 0 1 1 272390 272390 0 13892 2179 14744 35254 24874 24874 1 156320 0 TKPYIQVDIGGGQTK QQDIKFLPFKVVEKKTKPYIQVDIGGGQTK TKPYIQVDIGGGQTKTFAPEEISAMVLTKM K T K T K T 0 0 0 1 0 2 0 3 0 2 0 2 0 0 1 0 2 0 1 1 0 0 15 1 1603.857 P11021 P11021 124 138 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.014295 125.36 By MS/MS 5 0 1 1 2230800 2230800 0 13893 545 14745 35255 24875 24875 1 91694 0 TKTPGPGAQSALR ITALHIKLRATGGNRTKTPGPGAQSALRAL NRTKTPGPGAQSALRALARSGMKIGRIEDV R T K L R A 2 1 0 0 0 1 0 2 0 0 1 1 0 0 2 1 2 0 0 0 0 0 13 1 1282.6993 P62263 P62263 105 117 RPS14 40S ribosomal protein S14 yes yes 2;3 0.0011219 117.27 By MS/MS By matching 10 0 3 2 1 3850800 3749400 101380 13894 1122 14746 35256;35257;35258 24876;24877 24876 2 3985300 2600300 TKVEATKNETSAPFK DGHTKEMPTSGSKEKTKVEATKNETSAPFK TKVEATKNETSAPFKERPTPSLNNNCTTSE K T K F K E 2 0 1 0 0 0 2 0 0 0 0 3 0 1 1 1 3 0 0 1 0 0 15 2 1649.8625 P07814 P07814 719 733 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 3 0.0079225 89.506 By MS/MS 3 0 1 1 0 0 0 13895 493 14747 35259 24878 24878 1 0 0 TKYETELNLR LLQIDNARLAADDFRTKYETELNLRMSVEA ADDFRTKYETELNLRMSVEADINGLRRVLD R T K L R M 0 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 2 0 1 0 0 0 10 1 1265.6616 CON__P02533;P02533;CON__Q6IFX2 CON__P02533 202 211 KRT14 Keratin, type I cytoskeletal 14 yes no 2 0.0041856 142.36 By MS/MS 4 2 1 1 1 1 1 1 1 7 763980 0 763980 + 13896 35 14748 35260;35261;35262;35263;35264;35265;35266 24879 24879 1 0 1809300 TLADAEDKCVIEGNNCTFVR QRRSPPILPTLDSLKTLADAEDKCVIEGNN EDKCVIEGNNCTFVRDLSRIKPSQNTETLE K T L V R D 2 1 2 2 2 0 2 1 0 1 1 1 0 1 0 0 2 0 0 2 0 0 20 1 2311.0573 Q9NVV4 Q9NVV4 404 423 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 3 0.0042315 75.334 By MS/MS 6 0 1 1 2907100 2907100 0 13897 2663 14749 35267 24880 24880 1 22669 0 TLAETLVNLDVR PLHLAAYNGHCEALKTLAETLVNLDVRDHK ALKTLAETLVNLDVRDHKGRTALFLATERG K T L V R D 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 12 0 1342.7456 Q8NB46 Q8NB46 603 614 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 2 4.8699E-05 166.29 By MS/MS 4 0 1 1 319280 319280 0 13898 1938 14750 35268 24881 24881 1 8715.9 0 TLAFTSVDLTNK GEDIVITAHVLKQGKTLAFTSVDLTNKATG QGKTLAFTSVDLTNKATGKLIAQGRHTKHL K T L N K A 1 0 1 1 0 0 0 0 0 0 2 1 0 1 0 1 3 0 0 1 0 0 12 0 1308.6925 Q9NPJ3 Q9NPJ3 112 123 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 2 1.3361E-57 308.04 By MS/MS 10 0 1 1 748790 748790 0 13899 2582 14751 35269 24882 24882 1 795880 0 TLAGDVHIVR CTGNLCTKESYDYLKTLAGDVHIVRGDFDE YDYLKTLAGDVHIVRGDFDENLNYPEQKVV K T L V R G 1 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1079.6087 Q9UBQ0 Q9UBQ0 51 60 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 2 0.00093084 126.07 By MS/MS 9 0 1 1 797400 797400 0 13900 2754 14752 35270 24883 24883 1 457640 0 TLAHFRPIEDNEK FPEGEDQVNFRGFMRTLAHFRPIEDNEKSK MRTLAHFRPIEDNEKSKDVNGPEPLNSRSN R T L E K S 1 1 1 1 0 0 2 0 1 1 1 1 0 1 1 0 1 0 0 0 0 0 13 1 1568.7947 Q99653 Q99653 86 98 CHP1 Calcineurin B homologous protein 1 yes yes 2 0.0019634 145.23 By MS/MS 7.5 1.12 1 1 1 1 4 2532100 2532100 0 13901 2281 14753 35271;35272;35273;35274 24884 24884 1 271570 0 TLAIELAPR SPYNVSKTALLGLTKTLAIELAPRNIRVNC LLGLTKTLAIELAPRNIRVNCLAPGLIKTS K T L P R N 2 1 0 0 0 0 1 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 9 0 982.58113 Q9BTZ2;P0CG22 Q9BTZ2 195 203 DHRS4;DHRS4L1 Dehydrogenase/reductase SDR family member 4;Putative dehydrogenase/reductase SDR family member 4-like 1 yes no 2 0.00066472 149.65 By MS/MS 8.5 0.5 1 1 2 5214800 5214800 0 13902 2358 14754 35275;35276 24885 24885 1 380980 0 TLAQLNPESSLFIIASK RVWYVSNIDGTHIAKTLAQLNPESSLFIIA AQLNPESSLFIIASKTFTTQETITNAETAK K T L S K T 2 0 1 0 0 1 1 0 0 2 3 1 0 1 1 3 1 0 0 0 0 0 17 0 1831.0091 P06744 P06744 195 211 GPI Glucose-6-phosphate isomerase yes yes 2 6.1738E-11 172.85 By MS/MS 6 0 1 1 1469800 1469800 0 + 13903 484 14755 35277 24886 24886 1 11462 0 TLASAGGPDNLVLLNPEK YYIHNLVVACEIQVRTLASAGGPDNLVLLN SAGGPDNLVLLNPEKYKAKSRSPGSPVGEG R T L E K Y 2 0 2 1 0 0 1 2 0 0 4 1 0 0 2 1 1 0 0 1 0 0 18 0 1807.968 P35611 P35611 331 348 ADD1 Alpha-adducin yes yes 2 6.8818E-34 246.63 By MS/MS 4.5 0.5 1 1 2 587860 587860 0 13904 796 14756 35278;35279 24887 24887 1 18468 0 TLASSSSSSSSSSGAETPK LLPLFSPIKPVQTSKTLASSSSSSSSSSGA SSSSSSSSSGAETPKQAFFHLYHPLGSQHP K T L P K Q 2 0 0 0 0 0 1 1 0 0 1 1 0 0 1 10 2 0 0 0 0 0 19 0 1756.7963 Q9Y467 Q9Y467 253 271 SALL2 Sal-like protein 2 yes yes 2 6.3241E-06 138.28 By MS/MS 3 0 1 1 222000 222000 0 13905 2946 14757 35280 24888 24888 1 5795.3 0 TLATDILMGVLK LERYGVIILDEAHERTLATDILMGVLKEVV HERTLATDILMGVLKEVVRQRSDLKVIVMS R T L L K E 1 0 0 1 0 0 0 1 0 1 3 1 1 0 0 0 2 0 0 1 0 0 12 0 1273.7316 O43143 O43143 266 277 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 0.0044042 112.3 By MS/MS 4 0 1 1 0 0 0 13906 181 14758 35281 24889 24889 110 1 0 0 TLATIKEQNGDVK EGKIYVEIERARLTKTLATIKEQNGDVKEA TKTLATIKEQNGDVKEAASILQELQVETYG K T L V K E 1 0 1 1 0 1 1 1 0 1 1 2 0 0 0 0 2 0 0 1 0 0 13 1 1415.762 O00232 O00232 148 160 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 1.6077E-05 136.81 By MS/MS 6 0 1 1 0 0 0 13907 81 14759 35282 24890 24890 1 0 0 TLATLSENNMEAK AEWQPGETLRGTAERTLATLSENNMEAKFL ERTLATLSENNMEAKFLGNAPCGHYTFKFP R T L A K F 2 0 2 0 0 0 2 0 0 0 2 1 1 0 0 1 2 0 0 0 0 0 13 0 1420.6868 Q9H2W6 Q9H2W6 191 203 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 2 2.6826E-25 293.88 By MS/MS By matching 8 0 3 2 1 2511200 2477000 34191 13908 2485 14760;14761 35283;35284;35285 24891;24892 24892 1514 2 163410 291690 TLAVSGLGVVGR STECTLILTEGDSAKTLAVSGLGVVGRDKY SAKTLAVSGLGVVGRDKYGVFPLRGKILNV K T L G R D 1 1 0 0 0 0 0 3 0 0 2 0 0 0 0 1 1 0 0 3 0 0 12 0 1127.6663 P11388 P11388 467 478 TOP2A DNA topoisomerase 2-alpha yes yes 2 3.3662E-07 185.61 By MS/MS 3 0 1 1 1235500 1235500 0 13909 553 14762 35286 24893 24893 1 32252 0 TLDDLFPLR VKDIRAFDSRFSNIKTLDDLFPLRSMVFML RFSNIKTLDDLFPLRSMVFMLGTPYYGCTG K T L L R S 0 1 0 2 0 0 0 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 9 0 1088.5866 Q8IZH2 Q8IZH2 848 856 XRN1 5-3 exoribonuclease 1 yes yes 2 0.0014412 135.83 By MS/MS 2.5 0.5 1 1 2 356840 356840 0 13910 1887 14763 35287;35288 24894 24894 1 9959.9 0 TLDELGIHLTK ILAQVVGDVDTSLPRTLDELGIHLTKEELK SLPRTLDELGIHLTKEELKLNIRPLLRLVC R T L T K E 0 0 0 1 0 0 1 1 1 1 3 1 0 0 0 0 2 0 0 0 0 0 11 0 1238.6871 Q15029 Q15029 395 405 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00024529 153.1 By MS/MS 4 0 1 1 578130 578130 0 13911 1466 14764 35289 24895 24895 1 15782 0 TLDLPIYVTR HIKYAVTTGDHGIIRTLDLPIYVTRVKGNN HGIIRTLDLPIYVTRVKGNNVYCLDRECRP R T L T R V 0 1 0 1 0 0 0 0 0 1 2 0 0 0 1 0 2 0 1 1 0 0 10 0 1189.6707 P53621 P53621 563 572 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00037288 174.86 By MS/MS 3 1.41 1 1 1 1 1 5 9037500 9037500 0 13912 1005 14765 35290;35291;35292;35293;35294 24896;24897;24898;24899;24900 24898 5 279040 0 TLDQISDADNIPGLLVLK LIKLSDYDSSEEAIRTLDQISDADNIPGLL QISDADNIPGLLVLKSLAYRNKGSFDEAAK R T L L K S 1 0 1 3 0 1 0 1 0 2 4 1 0 0 1 1 1 0 0 1 0 0 18 0 1924.0517 Q6PGP7 Q6PGP7 375 392 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.0031389 129.37 By MS/MS 3.5 0.5 1 1 2 220340 220340 0 13913 1714 14766 35295;35296 24901 24901 1 5792.1 0 TLEDPDLNVR PIDPLLKNCIGDFLKTLEDPDLNVRRVALV GDFLKTLEDPDLNVRRVALVTFNSAAHNKP K T L V R R 0 1 1 2 0 0 1 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 10 0 1170.5881 Q86VP6 Q86VP6 1014 1023 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0015555 118.71 By MS/MS 3.5 0.5 1 1 2 4671300 4671300 0 13914 1829 14767 35297;35298 24902;24903 24903 2 125500 0 TLEEAVGNIVK DEFEKEETFTLSTIKTLEEAVGNIVKFLGM STIKTLEEAVGNIVKFLGMHPCERSDKVPD K T L V K F 1 0 1 0 0 0 2 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1171.6449 Q9Y678 Q9Y678 796 806 COPG1 Coatomer subunit gamma-1 yes yes 2 7.4923E-07 182.39 By MS/MS 5.67 3.09 1 1 1 3 11454000 11454000 0 13915 2996 14768 35299;35300;35301 24904;24905 24904 2 715360 0 TLEEDEEELFK PQFEPIVSLPEQEIKTLEEDEEELFKMRAK QEIKTLEEDEEELFKMRAKLFRFASENDLP K T L F K M 0 0 0 1 0 0 5 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1380.6297 P43487 P43487 40 50 RANBP1 Ran-specific GTPase-activating protein yes yes 2 3.7526E-08 194.94 By MS/MS 8 0.816 1 1 1 3 5938900 5938900 0 13916 865 14769 35302;35303;35304 24906;24907 24906 2 493560 0 TLEEDEEELFKMR PQFEPIVSLPEQEIKTLEEDEEELFKMRAK IKTLEEDEEELFKMRAKLFRFASENDLPEW K T L M R A 0 1 0 1 0 0 5 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 13 1 1667.7713 P43487 P43487 40 52 RANBP1 Ran-specific GTPase-activating protein yes yes 3 0.0081138 84.188 By MS/MS 8 0 1 1 2156500 2156500 0 13917 865 14770 35305 24908 24908 619 1 142270 0 TLEEILLER DATDKVNKVGEIHVKTLEEILLERASQKRG GEIHVKTLEEILLERASQKRGELQTKLKTE K T L E R A 0 1 0 0 0 0 3 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1114.6234 O75152 O75152 360 368 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 2 1.0267E-06 192.14 By MS/MS 4 0 1 1 432760 432760 0 13918 284 14771 35306 24909 24909 1 11814 0 TLEGVITR RSMVCTQKSKKTEFKTLEGVITRTKHGEKV SKKTEFKTLEGVITRTKHGEKVSLSSKCAE K T L T R T 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 2 0 0 1 0 0 8 0 887.50763 Q92878 Q92878 113 120 RAD50 DNA repair protein RAD50 yes yes 2 0.027206 107.01 By MS/MS 3 0 1 1 0 0 0 13919 2083 14772 35307 24910 24910 1 0 0 TLENPEPLLR ATDNIILTVPTANLRTLENPEPLLRLWDEV TANLRTLENPEPLLRLWDEVMQAVARLGAE R T L L R L 0 1 1 0 0 0 2 0 0 0 3 0 0 0 2 0 1 0 0 0 0 0 10 0 1180.6452 Q9Y4C2 Q9Y4C2 680 689 TCAF1 TRPM8 channel-associated factor 1 yes yes 2 0.00087616 128.6 By MS/MS 3.5 0.5 1 1 2 1701200 1701200 0 13920 2952 14773 35308;35309 24911 24911 1 46316 0 TLEPICDADPSALAK MIIENFEALKSWLSKTLEPICDADPSALAK TLEPICDADPSALAKYVLALVKKDKSEKEL K T L A K Y 3 0 0 2 1 0 1 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 15 0 1599.7814 Q5T8P6 Q5T8P6 20 34 RBM26 RNA-binding protein 26 yes yes 2 0.0073592 112.64 By MS/MS 3 0 1 1 769700 769700 0 13921 1633 14774 35310 24912 24912 1 20093 0 TLEPSGEASTSLGR SGSPAAAFSHCVCVRTLEPSGEASTSLGRT RTLEPSGEASTSLGRTHVLLHHCPAFGLLA R T L G R T 1 1 0 0 0 0 2 2 0 0 2 0 0 0 1 3 2 0 0 0 0 0 14 0 1403.6892 Q86YV9 Q86YV9 167 180 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.00078533 127.52 By MS/MS 5 0 1 1 1563700 1563700 0 13922 1850 14775 35311 24913 24913 1 64274 0 TLESSIQGLR CTTGIDGAMTIWDFKTLESSIQGLRIM___ IWDFKTLESSIQGLRIM_____________ K T L L R I 0 1 0 0 0 1 1 1 0 1 2 0 0 0 0 2 1 0 0 0 0 0 10 0 1102.5982 Q92747 Q92747 359 368 ARPC1A Actin-related protein 2/3 complex subunit 1A yes yes 2 0.0051751 106.88 By MS/MS 7.5 0.5 1 1 2 954450 954450 0 13923 2076 14776 35312;35313 24914 24914 1 30520 0 TLETLIR SMSSDTARTSPVTARTLETLIRLATAHAKA RTSPVTARTLETLIRLATAHAKARMSKTVD R T L I R L 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 7 0 844.50182 P25205 P25205 617 623 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.018407 130.77 By MS/MS 4.5 0.5 1 1 2 5073300 5073300 0 13924 683 14777 35314;35315 24915 24915 1 144290 0 TLEVEIEPGVR VCDECPNVKLVNEERTLEVEIEPGVRDGME NEERTLEVEIEPGVRDGMEYPFIGEGEPHV R T L V R D 0 1 0 0 0 0 3 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1240.6663 Q9UBS4 Q9UBS4 207 217 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.0044414 127.76 By MS/MS By matching 7.75 0.829 2 1 1 3 1 28981000 28915000 66649 13925 2756 14778 35316;35317;35318;35319 24916 24916 1 617760 273610 TLFATEDALEVR EYKMGRTKIFIRFPKTLFATEDALEVRRQS FPKTLFATEDALEVRRQSLATKIQAAWRGF K T L V R R 2 1 0 1 0 0 2 0 0 0 2 0 0 1 0 0 2 0 0 1 0 0 12 0 1363.6983 O00159 O00159 722 733 MYO1C Unconventional myosin-Ic yes yes 2 0.00035677 161.67 By MS/MS 4 0 1 1 4340800 4340800 0 13926 72 14779 35320 24917 24917 1 118500 0 TLFDILDDR PSTEGLPRAFLQSLRTLFDILDDRRRGCVH FLQSLRTLFDILDDRRRGCVHLREIESRWQ R T L D R R 0 1 0 3 0 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1106.5608 Q86UD0 Q86UD0 34 42 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 2 0.020713 96.331 By MS/MS 7 0 1 1 139960 139960 0 13927 1820 14780 35321 24918 24918 1 2501.1 0 TLFETIER QEDEKVVNMHPQDFKTLFETIERSKDCAYK MHPQDFKTLFETIERSKDCAYKWLYDETLE K T L E R S 0 1 0 0 0 0 2 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 8 0 1007.5288 Q9H5Q4 Q9H5Q4 372 379 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 2 0.0072772 128.61 By MS/MS 8 0.816 1 1 1 3 6764900 6764900 0 13928 2505 14781 35322;35323;35324 24919;24920 24919 2 181430 0 TLFNELR FLTLRYSSRRNPYCRTLFNELRIVVEHIIM SRRNPYCRTLFNELRIVVEHIIMKPACPLF R T L L R I 0 1 1 0 0 0 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 7 0 891.48142 P57088 P57088 206 212 TMEM33 Transmembrane protein 33 yes yes 2 0.046093 103.83 By MS/MS 1.5 0.5 1 1 2 1894700 1894700 0 13929 1053 14782 35325;35326 24921 24921 1 92711 0 TLFQPQTGAYQTLAK KNRDDRKLINTDKEKTLFQPQTGAYQTLAK TLFQPQTGAYQTLAKECVAQGCCVDLFLFP K T L A K E 2 0 0 0 0 3 0 1 0 0 2 1 0 1 1 0 3 0 1 0 0 0 15 0 1665.8726 P53992 P53992 671 685 SEC24C Protein transport protein Sec24C yes yes 2 0.001927 132.79 By MS/MS 4 0 1 1 724590 724590 0 13930 1009 14783 35327 24922 24922 1 19780 0 TLGDFAAEYAK VTGKGQDGIGSKAEKTLGDFAAEYAKSNRS KAEKTLGDFAAEYAKSNRSTCKGCMEKIEK K T L A K S 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 11 0 1184.5714 P09874 P09874 109 119 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0010448 155.06 By MS/MS 3 1.41 1 1 1 1 1 5 23585000 23585000 0 13931 521 14784 35328;35329;35330;35331;35332 24923 24923 1 661650 0 TLGDQTGECR EKSTGYMQQDLDVAKTLGDQTGECRAHGNL LDVAKTLGDQTGECRAHGNLGSAFFSKGNY K T L C R A 0 1 0 1 1 1 1 2 0 0 1 0 0 0 0 0 2 0 0 0 0 0 10 0 1135.4928 Q96AY4 Q96AY4 266 275 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.0061658 142 By MS/MS 2 0 1 1 0 0 0 13932 2125 14785 35333 24924 24924 1 0 0 TLGDTGFMPPDK ITHLVIRPNGRVALRTLGDTGFMPPDKITR ALRTLGDTGFMPPDKITRS___________ R T L D K I 0 0 0 2 0 0 0 2 0 0 1 1 1 1 2 0 2 0 0 0 0 0 12 0 1277.5962 Q96HS1 Q96HS1 274 285 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 7.4184E-08 192.38 By MS/MS 8 0 2 2 2817800 2817800 0 13933 2196 14786;14787 35334;35335 24925;24926 24925 1403 2 185890 0 TLGDTGFMPPDKITR ITHLVIRPNGRVALRTLGDTGFMPPDKITR TLGDTGFMPPDKITRS______________ R T L T R S 0 1 0 2 0 0 0 2 0 1 1 1 1 1 2 0 3 0 0 0 0 0 15 1 1647.829 Q96HS1 Q96HS1 274 288 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 3.3205E-05 168.83 By MS/MS By matching 8.6 0.8 3 1 1 4 1 19179000 19144000 34701 13934 2196 14788 35336;35337;35338;35339;35340 24927;24928;24929 24928 1403 3 1964600 296040 TLGECGFTSQTAR EQRLYKDDQLLDDGKTLGECGFTSQTARPQ GKTLGECGFTSQTARPQAPATVGLAFRADD K T L A R P 1 1 0 0 1 1 1 2 0 0 1 0 0 1 0 1 3 0 0 0 0 0 13 0 1426.6511 Q15370 Q15370 56 68 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 2 8.9425E-12 206.36 By MS/MS 10 0 1 1 301970 301970 0 13935 1492 14789 35341 24930 24930 1 320960 0 TLGGLEMELR GMQPQLQIRGVGFDRTLGGLEMELRLRERL VGFDRTLGGLEMELRLRERLAGLFNEQRKG R T L L R L 0 1 0 0 0 0 2 2 0 0 3 0 1 0 0 0 1 0 0 0 0 0 10 0 1117.5801 Q9Y4L1 Q9Y4L1 269 278 HYOU1 Hypoxia up-regulated protein 1 yes yes 2 0.018903 103.55 By MS/MS 3 0 1 1 0 0 0 13936 2955 14790 35342 24931 24931 1706 1 0 0 TLGILGLGR KWERKKFMGTELNGKTLGILGLGRIGREVA TELNGKTLGILGLGRIGREVATRMQSFGMK K T L G R I 0 1 0 0 0 0 0 3 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 898.56 O43175 O43175 147 155 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.00079241 171.38 By MS/MS 7 1.41 1 1 1 1 1 5 33838000 33838000 0 13937 185 14791 35343;35344;35345;35346;35347 24932;24933 24932 2 370120 0 TLGVDFIDVATK ECNLRASRSFPFVSKTLGVDFIDVATKVMI VSKTLGVDFIDVATKVMIGENVDEKHLPTL K T L T K V 1 0 0 2 0 0 0 1 0 1 1 1 0 1 0 0 2 0 0 2 0 0 12 0 1277.6867 P31327 P31327 1270 1281 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 2 6.4315E-07 173.64 By MS/MS 3 0 1 1 0 0 0 13938 752 14792 35348 24934 24934 1 0 0 TLGVDLVALATR ECNVRVSRSFPFVSKTLGVDLVALATRVIM VSKTLGVDLVALATRVIMGEEVEPVGLMTG K T L T R V 2 1 0 1 0 0 0 1 0 0 3 0 0 0 0 0 2 0 0 2 0 0 12 0 1227.7187 P27708 P27708 1229 1240 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.3394E-11 211.64 By MS/MS 2.5 1.12 1 1 1 1 4 767350 767350 0 13939 709 14793 35349;35350;35351;35352 24935;24936;24937 24937 3 31338 0 TLGVSFVQAESECR EGVNRSIEEVEADMKTLGVSFVQAESECRH KTLGVSFVQAESECRHSKLSTAEREQALRL K T L C R H 1 1 0 0 1 1 2 1 0 0 1 0 0 1 0 2 1 0 0 2 0 0 14 0 1581.7457 O60826 O60826 357 370 CCDC22 Coiled-coil domain-containing protein 22 yes yes 2 5.9691E-18 219.74 By MS/MS 5 0 1 1 1095600 1095600 0 13940 268 14794 35353 24938 24938 1 45034 0 TLGYVDEAGTVK LLLLPEYHQRVEVLRTLGYVDEAGTVKLAG VLRTLGYVDEAGTVKLAGRVACAMSSHELL R T L V K L 1 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 2 0 1 2 0 0 12 0 1251.6347 Q15477 Q15477 1064 1075 SKIV2L Helicase SKI2W yes yes 2 4.492E-05 167.12 By MS/MS 3 0 1 1 1362900 1362900 0 13941 1506 14795 35354 24939 24939 1 35579 0 TLHGSALFQR LTSLRNVSCEVDMFKTLHGSALFQRGQTQV VDMFKTLHGSALFQRGQTQVLCTVTFDSLE K T L Q R G 1 1 0 0 0 1 0 1 1 0 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1128.604 Q8TCS8 Q8TCS8 379 388 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 3 0.015933 85.862 By MS/MS 5 0 1 1 429450 429450 0 13942 1996 14796 35355 24940 24940 1 17652 0 TLHMAMSLPGMKR AQSQKKMGEIADAIKTLHMAMSLPGMKRIG IKTLHMAMSLPGMKRIGASTKSKDRKTEVD K T L K R I 1 1 0 0 0 0 0 1 1 0 2 1 3 0 1 1 1 0 0 0 0 0 13 1 1471.7462 Q7Z4L5 Q7Z4L5 585 597 TTC21B Tetratricopeptide repeat protein 21B yes yes 3 0.051742 45.257 By MS/MS 3 0 1 1 298700 298700 0 13943 1794 14797 35356 24941 24941 0 7797.5 0 TLIDDDNPPVSFVK GLCRIWDTASGQCLKTLIDDDNPPVSFVKF KTLIDDDNPPVSFVKFSPNGKYILAATLDN K T L V K F 0 0 1 3 0 0 0 0 0 1 1 1 0 1 2 1 1 0 0 2 0 0 14 0 1558.7879 P61964 P61964 208 221 WDR5 WD repeat-containing protein 5 yes yes 2 0.0017273 117.95 By MS/MS 8 0 1 1 360720 360720 0 13944 1109 14798 35357 24942 24942 1 23797 0 TLIEDEIATILK CGAGSVSDIIRLRNKTLIEDEIATILKSTL RNKTLIEDEIATILKSTLKGLEYLHFMRKI K T L L K S 1 0 0 1 0 0 2 0 0 3 2 1 0 0 0 0 2 0 0 0 0 0 12 0 1357.7704 Q13188 Q13188 117 128 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 2 1.2736E-11 211.78 By MS/MS 6 0 1 1 675170 675170 0 13945 1345 14799 35358 24943 24943 1 5265 0 TLIEFLLR EVPYLRKGMTGRPTRTLIEFLLRFSQDNA_ MTGRPTRTLIEFLLRFSQDNA_________ R T L L R F 0 1 0 0 0 0 1 0 0 1 3 0 0 1 0 0 1 0 0 0 0 0 8 0 1003.6066 P28838 P28838 506 513 LAP3 Cytosol aminopeptidase yes yes 2 0.0038523 143.61 By MS/MS 6 0 1 1 2036000 2036000 0 13946 722 14800 35359 24944 24944 1 15877 0 TLIEQIELR TLFYVKFRAAAPKVRTLIEQIELRSEKIPE AAPKVRTLIEQIELRSEKIPEYQQLLNDIH R T L L R S 0 1 0 0 0 1 2 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1113.6394 Q96JB2 Q96JB2 309 317 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 6.9631E-05 172.59 By MS/MS 4.5 0.5 1 1 2 1426100 1426100 0 13947 2205 14801 35360;35361 24945;24946 24946 2 45212 0 TLIGHVPDQR GQGEPVSQWPCNPEKTLIGHVPDQREIISF CNPEKTLIGHVPDQREIISFGSGYGGNSLL K T L Q R E 0 1 0 1 0 1 0 1 1 1 1 0 0 0 1 0 1 0 0 1 0 0 10 0 1134.6146 Q16822 Q16822 235 244 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.0031126 113.62 By MS/MS 6 0.816 1 1 1 3 3648500 3648500 0 13948 1550 14802 35362;35363;35364 24947 24947 1 57523 0 TLINELVK VQVCEGKKKQTNYLRTLINELVKGILPRSW KQTNYLRTLINELVKGILPRSWSHYTVPAG R T L V K G 0 0 1 0 0 0 1 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 8 0 928.55933 Q14204 Q14204 4450 4457 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0059442 133.58 By MS/MS 3 1.41 1 1 1 1 1 5 3328300 3328300 0 13949 1421 14803 35365;35366;35367;35368;35369 24948;24949;24950 24948 3 142440 0 TLIQNCGASTIR WPYRAVAQALEVIPRTLIQNCGASTIRLLT IPRTLIQNCGASTIRLLTSLRAKHTQENCE R T L I R L 1 1 1 0 1 1 0 1 0 2 1 0 0 0 0 1 2 0 0 0 0 0 12 0 1332.682 P49368 P49368 450 461 CCT3 T-complex protein 1 subunit gamma yes yes 2 8.0452E-33 255.52 By MS/MS By MS/MS 6.67 2 1 1 3 1 1 1 1 8 1 532500000 532120000 380410 13950 916 14804 35370;35371;35372;35373;35374;35375;35376;35377;35378 24951;24952;24953;24954;24955;24956;24957;24958;24959;24960 24959 10 13816000 1166700 TLISEPCGIK KAVIPEAVVEVLDPKTLISEPCGIKHIDCH VLDPKTLISEPCGIKHIDCHTTSISDLEFS K T L I K H 0 0 0 0 1 0 1 1 0 2 1 1 0 0 1 1 1 0 0 0 0 0 10 0 1116.5849 O60678 O60678 411 420 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.020518 94.85 By MS/MS 5 0 1 1 0 0 0 13951 257 14805 35379 24961 24961 1 0 0 TLKEITEGK NFDHPDAFDNELILKTLKEITEGKTVQIPV NELILKTLKEITEGKTVQIPVYDFVSHSRK K T L G K T 0 0 0 0 0 0 2 1 0 1 1 2 0 0 0 0 2 0 0 0 0 0 9 1 1017.5706 Q9BZX2 Q9BZX2 97 105 UCK2 Uridine-cytidine kinase 2 yes yes 2 0.014362 130.41 By MS/MS 8 0 1 1 1115300 1115300 0 13952 2428 14806 35380 24962 24962 1 73576 0 TLKIPAMTIAK PANEDQKIGIEIIKRTLKIPAMTIAKNAGV IIKRTLKIPAMTIAKNAGVEGSLIVEKIMQ R T L A K N 2 0 0 0 0 0 0 0 0 2 1 2 1 0 1 0 2 0 0 0 0 0 11 1 1185.7155 P10809 P10809 471 481 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.00015888 174.57 By MS/MS By MS/MS 7.11 1.52 1 3 2 1 1 1 8 1 66323000 66071000 251980 13953 544 14807;14808 35381;35382;35383;35384;35385;35386;35387;35388;35389 24963;24964;24965;24966;24967 24967 327 5 1018300 772820 TLLADQGEIR EDCFFYSLVFDPVQKTLLADQGEIRVGCKY DPVQKTLLADQGEIRVGCKYQAEIPDRLVE K T L I R V 1 1 0 1 0 1 1 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 10 0 1114.5982 O94776 O94776 139 148 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.00070545 136.52 By MS/MS By matching 4.5 0.5 1 1 1 1 4078400 4010400 67994 13954 349 14809 35390;35391 24968 24968 1 164840 142080 TLLAILR REAWASKDATYTSARTLLAILRLSTALARL DATYTSARTLLAILRLSTALARLRMVDVVE R T L L R L 1 1 0 0 0 0 0 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 7 0 798.53272 P33993 P33993 605 611 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.040433 107.74 By MS/MS 6 1.41 1 1 1 1 1 5 5956400 5956400 0 13955 775 14810 35392;35393;35394;35395;35396 24969 24969 1 194020 0 TLLAQTLAK EKSNILLLGPTGSGKTLLAQTLAKCLDVPF PTGSGKTLLAQTLAKCLDVPFAICDCTTLT K T L A K C 2 0 0 0 0 1 0 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 9 0 957.58588 O76031 O76031 300 308 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00051117 150.27 By MS/MS 6.5 1.12 1 1 1 1 4 19878000 19878000 0 13956 344 14811 35397;35398;35399;35400 24970;24971 24970 2 557980 0 TLLDIDNTR DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN K T L T R M 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1059.556 P35527;CON__P35527 P35527 225 233 KRT9 Keratin, type I cytoskeletal 9 yes no 2 5.4343E-08 200.86 By MS/MS By MS/MS 4.89 2.92 2 3 3 2 2 1 1 2 1 2 10 9 72839000 31484000 41354000 + 13957 791 14812 35401;35402;35403;35404;35405;35406;35407;35408;35409;35410;35411;35412;35413;35414;35415;35416;35417;35418;35419 24972;24973;24974;24975;24976;24977;24978;24979;24980;24981;24982;24983;24984;24985;24986;24987 24977 16 10474000 97957000 TLLDILADGTILK VRLPKLICGGKTLPRTLLDILADGTILKVG PRTLLDILADGTILKVGVGCSEDASKLLQD R T L L K V 1 0 0 2 0 0 0 1 0 2 4 1 0 0 0 0 2 0 0 0 0 0 13 0 1384.8177 Q9NVH0 Q9NVH0 151 163 EXD2 Exonuclease 3-5 domain-containing protein 2 yes yes 2 7.4874E-18 225.93 By MS/MS 5.5 0.5 1 1 2 357040 357040 0 13958 2651 14813 35420;35421 24988 24988 1 3920.8 0 TLLEALEQR PATAPSTTEVPPPPRTLLEALEQRMERYQV VPPPPRTLLEALEQRMERYQVAAAQAKSKG R T L Q R M 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1071.5924 Q6P1N0 Q6P1N0 347 355 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 1.0469E-05 176.44 By MS/MS 4 0.816 1 1 1 3 1195300 1195300 0 13959 1702 14814 35422;35423;35424 24989 24989 1 34413 0 TLLEEEYFR LIPGSQFWDASKTLRTLLEEEYFREKLSDG ASKTLRTLLEEEYFREKLSDGIGVMLPQVL R T L F R E 0 1 0 0 0 0 3 0 0 0 2 0 0 1 0 0 1 0 1 0 0 0 9 0 1198.587 P52701 P52701 636 644 MSH6 DNA mismatch repair protein Msh6 yes yes 2 1.5424E-06 190.26 By MS/MS 3.5 0.5 1 1 2 2153000 2153000 0 13960 989 14815 35425;35426 24990 24990 1 56385 0 TLLEEEYFREK LIPGSQFWDASKTLRTLLEEEYFREKLSDG KTLRTLLEEEYFREKLSDGIGVMLPQVLKG R T L E K L 0 1 0 0 0 0 4 0 0 0 2 1 0 1 0 0 1 0 1 0 0 0 11 1 1455.7246 P52701 P52701 636 646 MSH6 DNA mismatch repair protein Msh6 yes yes 2 4.9769E-06 183.72 By MS/MS 3 0 1 1 934200 934200 0 13961 989 14816 35427 24991 24991 1 24387 0 TLLEGEESR MNTKLALDLEIATYRTLLEGEESRMSGECA EIATYRTLLEGEESRMSGECAPNVSVSVST R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1032.5088 P04264;CON__P04264;CON__ENSEMBL:ENSBTAP00000038253 P04264 484 492 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.00015207 167.23 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 139340000 59650000 79687000 + 13962 450;45;32 14817 35428;35429;35430;35431;35432;35433;35434;35435;35436;35437;35438;35439;35440;35441;35442;35443;35444;35445;35446 24992;24993;24994;24995;24996;24997;24998;24999;25000;25001;25002;25003;25004;25005;25006;25007;25008;25009 24997 18 14873000 243430000 TLLENTAITIGR LHQLVEIINRPNTPKTLLENTAITIGRLGY TPKTLLENTAITIGRLGYVCPQEVAPMLQQ K T L G R L 1 1 1 0 0 0 1 1 0 2 2 0 0 0 0 0 3 0 0 0 0 0 12 0 1300.7351 Q92973 Q92973 774 785 TNPO1 Transportin-1 yes yes 2 2.7361E-17 231.07 By MS/MS 5 0.816 1 1 1 3 5785700 5785700 0 13963 2093 14818 35447;35448;35449 25010 25010 1 150480 0 TLLFTFNVPGSGNTYPK MQEEGQPLKLPDTKRTLLFTFNVPGSGNTY LFTFNVPGSGNTYPKDMEALLPLMNMVIYS R T L P K D 0 0 2 0 0 0 0 2 0 0 2 1 0 2 2 1 3 0 1 1 0 0 17 0 1854.9516 Q96A33 Q96A33 358 374 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 1.2859E-06 143.76 By MS/MS 6 0 1 1 1682100 1682100 0 13964 2114 14819 35450 25011 25011 1 13117 0 TLLLDGNPFR LLQIPPELGNCVNLRTLLLDGNPFRVPRAA CVNLRTLLLDGNPFRVPRAAILMKGTAAIL R T L F R V 0 1 1 1 0 0 0 1 0 0 3 0 0 1 1 0 1 0 0 0 0 0 10 0 1144.6241 Q9H9A6 Q9H9A6 569 578 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.032521 83.647 By MS/MS 5 0 1 1 263510 263510 0 13965 2532 14820 35451 25012 25012 1 10832 0 TLLMENISSWR LRPCKFLTYIYASVRTLLMENISSWRSFAD ASVRTLLMENISSWRSFADALGYVNLPLTF R T L W R S 0 1 1 0 0 0 1 0 0 1 2 0 1 0 0 2 1 1 0 0 0 0 11 0 1348.6809 Q9P0V3 Q9P0V3 760 770 SH3BP4 SH3 domain-binding protein 4 yes yes 2 0.011037 92.838 By MS/MS 5.5 0.5 1 1 2 17679000 17679000 0 13966 2732 14821 35452;35453 25013 25013 1591 1 164570 0 TLLSDPTYR MPNLYQKLESDPRTRTLLSDPTYRELIEQL SDPRTRTLLSDPTYRELIEQLRNKPSDLGT R T L Y R E 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 1 2 0 1 0 0 0 9 0 1064.5502 P31948 P31948 145 153 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.024635 94.114 By MS/MS 5 0.816 1 1 1 3 8472400 8472400 0 13967 762 14822 35454;35455;35456 25014 25014 1 166260 0 TLLSDPTYRELIEQLR MPNLYQKLESDPRTRTLLSDPTYRELIEQL LLSDPTYRELIEQLRNKPSDLGTKLQDPRI R T L L R N 0 2 0 1 0 1 2 0 0 1 4 0 0 0 1 1 2 0 1 0 0 0 16 1 1946.0473 P31948 P31948 145 160 STIP1 Stress-induced-phosphoprotein 1 yes yes 3 0.0067396 107.35 By MS/MS 6 0 1 1 2592200 2592200 0 13968 762 14823 35457 25015 25015 1 20214 0 TLLVADPR ASKKEIKDILIQYDRTLLVADPRRCESKKF ILIQYDRTLLVADPRRCESKKFGGPGARAR R T L P R R 1 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 8 0 883.51272 P62249 P62249 118 125 RPS16 40S ribosomal protein S16 yes yes 2 0.024035 101.54 By MS/MS By MS/MS 8.8 1.17 1 1 1 2 2 3 10733000 10583000 149490 13969 1120 14824 35458;35459;35460;35461;35462 25016;25017 25017 2 11136000 903630 TLLVADPRR ASKKEIKDILIQYDRTLLVADPRRCESKKF LIQYDRTLLVADPRRCESKKFGGPGARARY R T L R R C 1 2 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 9 1 1039.6138 P62249 P62249 118 126 RPS16 40S ribosomal protein S16 yes yes 2;3 0.0037136 161.02 By MS/MS By matching 10 0 3 2 1 1142900 1124800 18150 13970 1120 14825 35463;35464;35465 25018;25019 25018 2 1195500 465530 TLLVNCQNK LEKYVVLCESPQDKRTLLVNCQNKSLSQSF SPQDKRTLLVNCQNKSLSQSFENLLDEPAY R T L N K S 0 0 2 0 1 1 0 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 9 0 1088.5648 Q8TC07 Q8TC07 192 200 TBC1D15 TBC1 domain family member 15 yes yes 2 0.011469 101.6 By MS/MS 5 0 1 1 1360000 1360000 0 13971 1991 14826 35466 25020 25020 1 55899 0 TLLVSTSAVDNNEAQK TKTVYNPAALKAAQKTLLVSTSAVDNNEAQ LLVSTSAVDNNEAQKKKQEALKLQQDVRKR K T L Q K K 2 0 2 1 0 1 1 0 0 0 2 1 0 0 0 2 2 0 0 2 0 0 16 0 1688.8581 Q5T8P6 Q5T8P6 710 725 RBM26 RNA-binding protein 26 yes yes 2 5.8907E-11 164.22 By MS/MS 3 0 1 1 533120 533120 0 13972 1633 14827 35467 25021 25021 0 13917 0 TLMAQSIYGGR RQNISPDKIPWSALKTLMAQSIYGGRVDNE SALKTLMAQSIYGGRVDNEFDQRLLNTFLE K T L G R V 1 1 0 0 0 1 0 2 0 1 1 0 1 0 0 1 1 0 1 0 0 0 11 0 1195.6019 Q14204 Q14204 4245 4255 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 7.7535E-11 201.84 By MS/MS 1.5 0.5 1 1 2 981530 981530 0 13973 1421 14828 35468;35469 25022;25023 25022 1118 2 48212 0 TLMECVSNTAK LGREVPEHITEEELKTLMECVSNTAKKKYL EELKTLMECVSNTAKKKYLKYLYTKEKVKK K T L A K K 1 0 1 0 1 0 1 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 11 0 1252.5792 Q7L0Y3 Q7L0Y3 119 129 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 8.1235E-05 164.66 By MS/MS 7 0 2 2 1975000 1975000 0 13974 1761 14829;14830 35470;35471 25024;25025 25025 1243 2 35294 0 TLNDELEIIEGMK KKVGRKGVITVKDGKTLNDELEIIEGMKFD GKTLNDELEIIEGMKFDRGYISPYFINTSK K T L M K F 0 0 1 1 0 0 3 1 0 2 2 1 1 0 0 0 1 0 0 0 0 0 13 0 1503.7491 P10809 P10809 206 218 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 3.2401E-46 283.43 By MS/MS 5.57 1.29 1 2 2 2 7 27391000 27391000 0 13975 544 14831;14832 35472;35473;35474;35475;35476;35477;35478 25026;25027;25028;25029;25030;25031;25032 25029 328 7 233770 0 TLNDELEIIEGMKFDR KKVGRKGVITVKDGKTLNDELEIIEGMKFD LNDELEIIEGMKFDRGYISPYFINTSKGQK K T L D R G 0 1 1 2 0 0 3 1 0 2 2 1 1 1 0 0 1 0 0 0 0 0 16 1 1921.9455 P10809 P10809 206 221 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.0416E-09 222.56 By MS/MS 6 0 3 3 28955000 28955000 0 13976 544 14833;14834 35479;35480;35481 25033;25034;25035;25036 25035 328 4 225790 0 TLNDMRQEYEQLIAK VNVEINVAPGKDLTKTLNDMRQEYEQLIAK TLNDMRQEYEQLIAKNRKDIENQYETQITQ K T L A K N 1 1 1 1 0 2 2 0 0 1 2 1 1 0 0 0 1 0 1 0 0 0 15 1 1850.9196 P35527;CON__P35527 P35527 322 336 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.0023511 103.3 By MS/MS By MS/MS 5.82 2.79 1 1 1 2 1 1 2 1 1 4 7 32555000 21363000 11191000 + 13977 791 14835 35482;35483;35484;35485;35486;35487;35488;35489;35490;35491;35492 25037;25038;25039;25040;25041;25042;25043;25044;25045 25045 537 8 10598000 21717000 TLNEADCATVPPAIR GTGKVTLEYRPVIDKTLNEADCATVPPAIR TLNEADCATVPPAIRSY_____________ K T L I R S 3 1 1 1 1 0 1 0 0 1 1 0 0 0 2 0 2 0 0 1 0 0 15 0 1626.8036 P31040 P31040 648 662 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 0.011628 103.43 By MS/MS 5 0 1 1 596530 596530 0 13978 749 14836 35493 25046 25046 1 24520 0 TLNEWDSR VMTGANGEVSFINIKTLNEWDSRHCNGVDW VSFINIKTLNEWDSRHCNGVDWRQKLDSQR K T L S R H 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 8 0 1019.4672 O15371 O15371 395 402 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.0016027 163.15 By MS/MS By matching 6 0.707 1 2 1 3 1 19396000 19304000 91872 13979 172 14837 35494;35495;35496;35497 25047;25048 25048 2 268570 281760 TLNNDLGPNWR VRQSADFMPLKQMMKTLNNDLGPNWRDKLE QMMKTLNNDLGPNWRDKLEYFEERPFAAAS K T L W R D 0 1 3 1 0 0 0 1 0 0 2 0 0 0 1 0 1 1 0 0 0 0 11 0 1298.6367 Q8NI60 Q8NI60 315 325 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 9.5635E-05 176.48 By MS/MS By matching 6 0 2 1 1 8118000 8101500 16552 13980 1978 14838 35498;35499 25049 25049 1 63175 50762 TLNNLYAEAEK LENRIDRQQFEETVRTLNNLYAEAEKLGGQ ETVRTLNNLYAEAEKLGGQSYLEGCLACLT R T L E K L 2 0 2 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 11 0 1264.6299 Q7Z5G4 Q7Z5G4 49 59 GOLGA7 Golgin subfamily A member 7 yes yes 2 5.7137E-16 218.11 By MS/MS 10 0 1 1 2162500 2162500 0 13981 1799 14839 35500 25050 25050 1 2298500 0 TLNQLGTPQDSPELR SNIQKITQCSVEIQRTLNQLGTPQDSPELR TLNQLGTPQDSPELRQQLQQKQQYTNQLAK R T L L R Q 0 1 1 1 0 2 1 1 0 0 3 0 0 0 2 1 2 0 0 0 0 0 15 0 1667.8479 O15400 O15400 35 49 STX7 Syntaxin-7 yes yes 2 2.3878E-28 234.79 By MS/MS 7.5 0.5 1 1 2 2474200 2474200 0 13982 176 14840 35501;35502 25051 25051 1 59242 0 TLPDVLAEPLSSER HLNGTASQKKSLVHKTLPDVLAEPLSSERH KTLPDVLAEPLSSERHEFVMAQYVNEFQGN K T L E R H 1 1 0 1 0 0 2 0 0 0 3 0 0 0 2 2 1 0 0 1 0 0 14 0 1525.7988 Q9H3L0 Q9H3L0 98 111 MMADHC Methylmalonic aciduria and homocystinuria type D protein, mitochondrial yes yes 2 0.0040048 92.943 By MS/MS 8 0 1 1 393650 393650 0 13983 2488 14841 35503 25052 25052 1 25969 0 TLPETLDPAEYNISPETR ______________________________ ETLDPAEYNISPETRRAQAERLAIRAQLKR R T L T R R 1 1 1 1 0 0 3 0 0 1 2 0 0 0 3 1 3 0 1 0 0 0 18 0 2044.9953 O95168 O95168 13 30 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 2 1.0882E-05 138.55 By MS/MS 10 0 1 1 877700 877700 0 13984 370 14842 35504 25053 25053 1 932900 0 TLPGSDWTPNAQFITR DLPKLEKRLEEWLGRTLPGSDWTPNAQFIT LPGSDWTPNAQFITRSWLRDGLKPRCITRD R T L T R S 1 1 1 1 0 1 0 1 0 1 1 0 0 1 2 1 3 1 0 0 0 0 16 0 1802.8951 P56192 P56192 468 483 MARS Methionine--tRNA ligase, cytoplasmic yes yes 2 0.0072472 108.71 By MS/MS 4 0 1 1 1119600 1119600 0 13985 1042 14843 35505 25054 25054 1 30564 0 TLPGWNTDISNAR PANQEVLNKVEVQYKTLPGWNTDISNARAF YKTLPGWNTDISNARAFKELPVNAQNYVRF K T L A R A 1 1 2 1 0 0 0 1 0 1 1 0 0 0 1 1 2 1 0 0 0 0 13 0 1443.7106 P30520 P30520 404 416 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 0.003438 111.94 By MS/MS 7 0 1 1 4570400 4570400 0 13986 742 14844 35506 25055 25055 1 81675 0 TLQDDFLEFAK SLEVKELSKDSPALKTLQDDFLEFAKDKNF PALKTLQDDFLEFAKDKNFQVLNFVETLPT K T L A K D 1 0 0 2 0 1 1 0 0 0 2 1 0 2 0 0 1 0 0 0 0 0 11 0 1325.6503 Q96JX3 Q96JX3 568 578 SERAC1 Protein SERAC1 yes yes 2 0.00043779 145.28 By MS/MS 5 0 1 1 499560 499560 0 13987 2213 14845 35507 25056 25056 1 20534 0 TLQELQK TRSTSPPNHAEAIVKTLQELQKLHVSEQNA NHAEAIVKTLQELQKLHVSEQNAQRANLFH K T L Q K L 0 0 0 0 0 2 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 7 0 858.48108 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 325 331 yes yes 2 0.016936 134.81 By MS/MS 6 0.816 1 1 1 3 3089200 3089200 0 + 13988 31 14846 35508;35509;35510 25057 25057 1 91280 0 TLQEQSGAMNIR GAFQSDLSSISSEIRTLQEQSGAMNIRLRN EIRTLQEQSGAMNIRLRNRQAVRGKLGELV R T L I R L 1 1 1 0 0 2 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 12 0 1346.6612 Q8N1B4 Q8N1B4 146 157 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 0.0069977 96.756 By MS/MS 4 0 1 1 265280 265280 0 13989 1897 14847 35511 25058 25058 1291 1 7242 0 TLQEVLTMEYR SLKITLRQLMEGSSKTLQEVLTMEYRLSQA GSSKTLQEVLTMEYRLSQACMRGHDFHEGV K T L Y R L 0 1 0 0 0 1 2 0 0 0 2 0 1 0 0 0 2 0 1 1 0 0 11 0 1381.6912 Q6NVY1 Q6NVY1 321 331 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 2 4.3618E-07 184.36 By MS/MS 7 0 1 1 731550 731550 0 13990 1693 14848 35512 25059 25059 1214 1 13073 0 TLQEVTQLSQEAQR CFIAGADINMLAACKTLQEVTQLSQEAQRI KTLQEVTQLSQEAQRIVEKLEKSTKPIVAA K T L Q R I 1 1 0 0 0 4 2 0 0 0 2 0 0 0 0 1 2 0 0 1 0 0 14 0 1629.8322 P40939 P40939 112 125 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 5.6451E-35 296.28 By MS/MS 4.8 2.18 1 1 1 1 2 1 2 1 10 50615000 50615000 0 13991 835 14849 35513;35514;35515;35516;35517;35518;35519;35520;35521;35522 25060;25061;25062;25063 25061 3 2023200 0 TLQGTVSQAQER QVLLAQVQNSEQLLRTLQGTVSQAQERVQL LLRTLQGTVSQAQERVQLQMAELVTTHKCL R T L E R V 1 1 0 0 0 3 1 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 12 0 1316.6684 Q9H5N1 Q9H5N1 347 358 RABEP2 Rab GTPase-binding effector protein 2 yes yes 2 0.00036011 145.14 By MS/MS 4.5 0.5 1 1 2 629280 629280 0 13992 2504 14850 35523;35524 25064 25064 1 24954 0 TLQIFNIEMK IMNPASKVIALKAGKTLQIFNIEMKSKMKA LKAGKTLQIFNIEMKSKMKAHTMTDDVTFW K T L M K S 0 0 1 0 0 1 1 0 0 2 1 1 1 1 0 0 1 0 0 0 0 0 10 0 1235.6584 Q00610;P53675 Q00610 87 96 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 1.3025E-08 195.36 By MS/MS 2.5 1.12 1 1 1 1 4 1338500 1338500 0 13993 1235 14851 35525;35526;35527;35528 25065;25066;25067 25067 1007 3 47298 0 TLQIKDSPPEVAGAR SYLLTLSHLAAVAHKTLQIKDSPPEVAGAR TLQIKDSPPEVAGARLHLFKAVRSVLANGM K T L A R L 2 1 0 1 0 1 1 1 0 1 1 1 0 0 2 1 1 0 0 1 0 0 15 1 1580.8522 Q5T160 Q5T160 538 552 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2;3 0.014506 108.66 By MS/MS 6 0 2 2 2092800 2092800 0 13994 1624 14852 35529;35530 25068;25069 25069 2 16320 0 TLQLALDLVSSR ILRVLSTPDLEVRKKTLQLALDLVSSRNVE RKKTLQLALDLVSSRNVEELVIVLKKEVIK K T L S R N 1 1 0 1 0 1 0 0 0 0 4 0 0 0 0 2 1 0 0 1 0 0 12 0 1314.7507 P53618 P53618 340 351 COPB1 Coatomer subunit beta yes yes 2 4.9536E-05 166.11 By MS/MS 4 0 1 1 170880 170880 0 13995 1004 14853 35531 25070 25070 1 4664.8 0 TLQLDNNFEVK SSVKLWDLRKLKNFKTLQLDNNFEVKSLIF KNFKTLQLDNNFEVKSLIFDQSGTYLALGG K T L V K S 0 0 2 1 0 1 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 11 0 1319.6721 Q9UMS4 Q9UMS4 429 439 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 6.3749E-07 184.36 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 18424000 18383000 40982 13996 2834 14854 35532;35533;35534 25071;25072 25072 2 146330 125690 TLQNTPSLHSR HEQSYVGKRSNRVVRTLQNTPSLHSRHWGA RVVRTLQNTPSLHSRHWGAPQQREGRQQQH R T L S R H 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 11 0 1252.6524 Q9Y5Y5 Q9Y5Y5 177 187 PEX16 Peroxisomal membrane protein PEX16 yes yes 2;3 0.0066433 108.9 By MS/MS 7.33 0.471 2 1 3 3619000 3619000 0 13997 2988 14855 35535;35536;35537 25073;25074 25073 2 73949 0 TLQQNAESR KAIKLLEHSKGAGSKTLQQNAESRFN____ KGAGSKTLQQNAESRFN_____________ K T L S R F 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 9 0 1045.5152 O95816 O95816 201 209 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 0.0073765 110.53 By MS/MS By matching 9 0.816 1 1 1 2 1 1838600 1814900 23656 13998 408 14856 35538;35539;35540 25075 25075 1 1065000 201810 TLQQNAESRFN KAIKLLEHSKGAGSKTLQQNAESRFN____ AGSKTLQQNAESRFN_______________ K T L F N - 1 1 2 0 0 2 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 1 1306.6266 O95816 O95816 201 211 BAG2 BAG family molecular chaperone regulator 2 yes yes 2 0.00048163 167.09 By MS/MS 9 0.816 1 1 1 3 2803500 2803500 0 13999 408 14857 35541;35542;35543 25076;25077 25077 2 1118000 0 TLQSLACGK EIKQATGIEDGELRRTLQSLACGKARVLAK DGELRRTLQSLACGKARVLAKNPKGKDIED R T L G K A 1 0 0 0 1 1 0 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 0 976.50117 Q13620;Q13619 Q13620 781 789 CUL4B;CUL4A Cullin-4B;Cullin-4A yes no 2 0.022213 99.013 By MS/MS 4.5 0.5 1 1 2 2754800 2754800 0 14000 1390 14858 35544;35545 25078 25078 1 92459 0 TLQVQAAQFAK AQAYMNQRKLDHEVKTLQVQAAQFAKQTGQ HEVKTLQVQAAQFAKQTGQWIGMVENFNQA K T L A K Q 3 0 0 0 0 3 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 11 0 1203.6612 P78537 P78537 90 100 BLOC1S1 Biogenesis of lysosome-related organelles complex 1 subunit 1 yes yes 2 0.0025458 118.03 By MS/MS 10 0 1 1 208100 208100 0 14001 1198 14859 35546 25079 25079 1 221190 0 TLQYLSQGNVVFK ______________________________ RRTLQYLSQGNVVFKDSVKVMTVNYNTHGE R T L F K D 0 0 1 0 0 2 0 1 0 0 2 1 0 1 0 1 1 0 1 2 0 0 13 0 1495.8035 P82663 P82663 12 24 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2 7.9424E-35 261.22 By MS/MS 9 0 1 1 766220 766220 0 14002 1202 14860 35547 25080 25080 1 439740 0 TLRDIETFYNTSIEEMPLNVADLI RKGVAINMVTEEDKRTLRDIETFYNTSIEE NTSIEEMPLNVADLI_______________ R T L L I - 1 1 2 2 0 0 3 0 0 3 3 0 1 1 1 1 3 0 1 1 0 0 24 1 2796.3892 P60842 P60842 383 406 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 0.0065584 98.227 By MS/MS 6 0 2 2 2113500 2113500 0 14003 1074 14861 35548;35549 25081;25082 25081 848 2 16481 0 TLRDQWEK TLPSKEVKHARKTLKTLRDQWEKALCRALR HARKTLKTLRDQWEKALCRALRETKNRLER K T L E K A 0 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 8 1 1074.5458 O00411 O00411 436 443 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.010189 120.15 By MS/MS 3.5 0.5 1 1 2 1477600 1477600 0 14004 92 14862 35550;35551 25083 25083 1 38792 0 TLRNDNSSR LLQSNPVLEAFGNAKTLRNDNSSRFGKYMD AFGNAKTLRNDNSSRFGKYMDVQFDFKGAP K T L S R F 0 2 2 1 0 0 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 9 1 1061.5214 A7E2Y1;Q8N1T3;Q9Y2K3;O00159 O00159 189 197 MYH7B;MYO1H;MYH15;MYO1C Myosin-7B;Unconventional myosin-Ih;Myosin-15;Unconventional myosin-Ic no no 2 0.0097513 137.14 By MS/MS 4 0 1 1 305490 305490 0 14005 72;25 14863 35552 25084 25084 1 8339.5 0 TLRPALVGVVK TVALVSKVGYKLHGRTLRPALVGVVKEA__ LHGRTLRPALVGVVKEA_____________ R T L V K E 1 1 0 0 0 0 0 1 0 0 2 1 0 0 1 0 1 0 0 3 0 0 11 1 1151.739 Q9HAV7 Q9HAV7 205 215 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 3 0.00062822 144.55 By MS/MS 8.5 0.5 1 1 2 2429300 2429300 0 14006 2547 14864 35553;35554 25085 25085 1 1296400 0 TLSDYNIQK QQRLIFAGKQLEDGRTLSDYNIQKESTLHL QLEDGRTLSDYNIQKESTLHLVLRLRGGAK R T L Q K E 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 1080.5451 P62979;P0CG47;P0CG48 P62979 55 63 RPS27A;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin no no 2 5.2218E-08 201.39 By MS/MS By matching 5.5 2.99 1 1 2 2 1 2 1 2 8 4 104100000 103920000 178680 14007 1165 14865 35555;35556;35557;35558;35559;35560;35561;35562;35563;35564;35565;35566 25086;25087;25088;25089;25090;25091;25092 25088 7 5553400 1484500 TLSEETR LKSEQIRAQAEERRKTLSEETRQHQARAQY AQAEERRKTLSEETRQHQARAQYQDKLARQ K T L T R Q 0 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 7 0 834.40831 Q5T9A4;Q9NVI7 Q9NVI7 166 172 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.044771 104.75 By MS/MS 6 0 1 1 3365900 3365900 0 14008 2655;1634 14866 35567 25093 25093 1 26247 0 TLSEKNNITQK SSLFSGILKEMDKFKTLSEKNNITQKLLQD DKFKTLSEKNNITQKLLQDFNRFLNTTFSF K T L Q K L 0 0 2 0 0 1 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 11 1 1274.683 P78527 P78527 2825 2835 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 1.598E-06 195.51 By MS/MS 1.5 0.5 2 2 4 2215500 2215500 0 14009 1197 14867 35568;35569;35570;35571 25094;25095;25096 25094 3 108930 0 TLSFGSDLNYATR ARHCDLQVRIDHTSRTLSFGSDLNYATRED SRTLSFGSDLNYATREDAPIGPHLQSMPSE R T L T R E 1 1 1 1 0 0 0 1 0 0 2 0 0 1 0 2 2 0 1 0 0 0 13 0 1443.6994 Q14152 Q14152 490 502 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 3.7436E-25 235.49 By MS/MS By matching 3.4 1.02 1 2 1 1 4 1 18854000 18718000 135810 14010 1409 14868 35572;35573;35574;35575;35576 25097;25098;25099;25100;25101 25098 5 504770 194650 TLSFSHDGK LVCVRCFSRLDWPVRTLSFSHDGKMLASAS LDWPVRTLSFSHDGKMLASASEDHFIDIAE R T L G K M 0 0 0 1 0 0 0 1 1 0 1 1 0 1 0 2 1 0 0 0 0 0 9 0 990.47706 Q96J01 Q96J01 271 279 THOC3 THO complex subunit 3 yes yes 2 0.0080895 108.98 By MS/MS 8 0 1 1 624870 624870 0 14011 2204 14869 35577 25102 25102 1 41223 0 TLSGHTAK ESSPESPVTITEPYRTLSGHTAKITSVAWS TITEPYRTLSGHTAKITSVAWSPHHDGRLV R T L A K I 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 1 2 0 0 0 0 0 8 0 813.43447 Q8TEQ6 Q8TEQ6 634 641 GEMIN5 Gem-associated protein 5 yes yes 2 0.038612 95.815 By MS/MS 3 0 1 1 418390 418390 0 14012 2003 14870 35578 25103 25103 1 10922 0 TLSGMESYCVR APEIELALRLTEYSRTLSGMESYCVRAFAD EYSRTLSGMESYCVRAFADAMEVIPSTLAE R T L V R A 0 1 0 0 1 0 1 1 0 0 1 0 1 0 0 2 1 0 1 1 0 0 11 0 1301.5744 P50991 P50991 442 452 CCT4 T-complex protein 1 subunit delta yes yes 2 2.3538E-07 191.45 By MS/MS 5.44 2.01 1 1 1 1 2 1 2 9 99574000 99574000 0 14013 956 14871;14872 35579;35580;35581;35582;35583;35584;35585;35586;35587 25104;25105;25106;25107 25106 721 4 940800 0 TLSYLLPLLQR RGRHVVCAAETGSGKTLSYLLPLLQRLLGQ GSGKTLSYLLPLLQRLLGQPSLDSLPIPAP K T L Q R L 0 1 0 0 0 1 0 0 0 0 5 0 0 0 1 1 1 0 1 0 0 0 11 0 1315.7864 Q9NUL7 Q9NUL7 179 189 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 1.5707E-10 196.99 By MS/MS 6 0 1 1 1873800 1873800 0 14014 2638 14873 35588 25108 25108 1 14612 0 TLTDELAALQITGVK LAYCSSKFAAVGFHKTLTDELAALQITGVK TLTDELAALQITGVKTTCLCPNFVNTGFIK K T L V K T 2 0 0 1 0 1 1 1 0 1 3 1 0 0 0 0 3 0 0 1 0 0 15 0 1571.877 Q8NBQ5 Q8NBQ5 198 212 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 2 3.0232E-10 238.07 By MS/MS 8 0 1 1 1100900 1100900 0 14015 1944 14874 35589 25109 25109 1 72625 0 TLTEDEIATILQSTLK CGAGSVSDIIRLRNKTLTEDEIATILQSTL LTEDEIATILQSTLKGLEYLHFMRKIHRDI K T L L K G 1 0 0 1 0 1 2 0 0 2 3 1 0 0 0 1 4 0 0 0 0 0 16 0 1774.9564 Q13043 Q13043 120 135 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 2 1.1439E-20 214.88 By MS/MS 6 0 1 1 340910 340910 0 14016 1327 14875 35590 25110 25110 1 2658.4 0 TLTEPCPLASESR GQGKKDWSLFRMFSRTLTEPCPLASESRVY SRTLTEPCPLASESRVYVDITTYNQDNETL R T L S R V 1 1 0 0 1 0 2 0 0 0 2 0 0 0 2 2 2 0 0 0 0 0 13 0 1459.6977 Q969N2 Q969N2 267 279 PIGT GPI transamidase component PIG-T yes yes 2 0.00029922 143.24 By MS/MS 5.5 0.5 1 1 2 6998800 6998800 0 14017 2105 14876 35591;35592 25111 25111 1 103810 0 TLTGKEIEIDIEPTDKVER ______________________________ KEIEIDIEPTDKVERIKERVEEKEGIPPQQ K T L E R I 0 1 0 2 0 0 4 1 0 3 1 2 0 0 1 0 3 0 0 1 0 0 19 2 2185.1478 Q15843 Q15843 7 25 NEDD8 NEDD8 yes yes 3;4 0.001945 96.562 By MS/MS 4.5 0.5 2 2 4 5564000 5564000 0 14018 1527 14877 35593;35594;35595;35596 25112;25113;25114 25112 3 179160 0 TLTLVDTGIGMTK GKELKIDIIPNPQERTLTLVDTGIGMTKAD ERTLTLVDTGIGMTKADLINNLGTIAKSGT R T L T K A 0 0 0 1 0 0 0 2 0 1 2 1 1 0 0 0 4 0 0 1 0 0 13 0 1348.7272 P08238 P08238 83 95 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 1.9615E-25 270.61 By MS/MS 5.17 1.07 2 2 1 1 6 18105000 18105000 0 14019 501 14878 35597;35598;35599;35600;35601;35602 25115;25116;25117;25118;25119 25118 4 610780 0 TLTPISAAYAR SEDEAKVCMVYDLYKTLTPISAAYARARGA DLYKTLTPISAAYARARGADRMSSFGDFVA K T L A R A 3 1 0 0 0 0 0 0 0 1 1 0 0 0 1 1 2 0 1 0 0 0 11 0 1162.6346 P31939 P31939 295 305 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.05402 75.652 By MS/MS 5 0.816 1 1 1 3 4141300 4141300 0 14020 757 14879 35603;35604;35605 25120 25120 1 47522 0 TLTPLGREQAELTGLR RHSQYHVDGSLEKDRTLTPLGREQAELTGL LTPLGREQAELTGLRLASLGLKFNKIVHSS R T L L R L 1 2 0 0 0 1 2 2 0 0 4 0 0 0 1 0 3 0 0 0 0 0 16 1 1753.9686 Q96HS1 Q96HS1 119 134 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2;3 0.00075736 135.94 By MS/MS 7.83 1.07 1 1 2 2 6 7154000 7154000 0 14021 2196 14880 35606;35607;35608;35609;35610;35611 25121;25122 25122 2 442740 0 TLTQGGVTYR CYENKFAPRCARCSKTLTQGGVTYRDQPWH ARCSKTLTQGGVTYRDQPWHRECLVCTGCQ K T L Y R D 0 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 3 0 1 1 0 0 10 0 1094.572 Q13643 Q13643 168 177 FHL3 Four and a half LIM domains protein 3 yes yes 2 0.00098087 123.75 By MS/MS 9.5 0.5 1 1 2 356460 356460 0 14022 1395 14881 35612;35613 25123 25123 1 231030 0 TLTTMAPYLSTEDVPLAR LGEVGSPGLLFYSLRTLTTMAPYLSTEDVP TMAPYLSTEDVPLARMLVPKLIMAMQTLIP R T L A R M 2 1 0 1 0 0 1 0 0 0 3 0 1 0 2 1 4 0 1 1 0 0 18 0 1978.0081 Q8TEX9 Q8TEX9 183 200 IPO4 Importin-4 yes yes 2 2.3007E-07 178.22 By MS/MS 4 0.707 1 2 1 4 2612400 2612400 0 14023 2005 14882;14883 35614;35615;35616;35617 25124;25125 25124 1317 2 71885 0 TLTTVQGIADDYDK EDYIHIRIQQRNGRKTLTTVQGIADDYDKK KTLTTVQGIADDYDKKKLVKAFKKKFACNG K T L D K K 1 0 0 3 0 1 0 1 0 1 1 1 0 0 0 0 3 0 1 1 0 0 14 0 1538.7464 P41567 P41567 43 56 EIF1 Eukaryotic translation initiation factor 1 no no 2 9.5483E-06 168.82 By MS/MS 10 0 1 1 720650 720650 0 14024 841 14884 35618 25126 25126 1 765970 0 TLTVMFVDERKTMSEK EKTEFTLKEDLTKLKTLTVMFVDERKTMSE LTVMFVDERKTMSEKLKKTEDKLQAASSQL K T L E K L 0 1 0 1 0 0 2 0 0 0 1 2 2 1 0 1 3 0 0 2 0 0 16 2 1913.9591 Q4L180 Q4L180 495 510 FILIP1L Filamin A-interacting protein 1-like yes yes 2 0.022612 108.7 By MS/MS 6 0 1 1 2218700 2218700 0 14025 1579 14885 35619 25127 25127 1182 1 17301 0 TLTYPLDLFK LQNLLCGSGAGVISKTLTYPLDLFKKRLQV GVISKTLTYPLDLFKKRLQVGGFEHARAAF K T L F K K 0 0 0 1 0 0 0 0 0 0 3 1 0 1 1 0 2 0 1 0 0 0 10 0 1209.6645 Q9HC21 Q9HC21 232 241 SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes yes 2 0.0292 98.582 By MS/MS 8 0 1 1 353890 353890 0 14026 2556 14886 35620 25128 25128 1 23346 0 TLVAVKPDGVQR LVRHGSGGPSWTRERTLVAVKPDGVQRRLV RERTLVAVKPDGVQRRLVGDVIQRFERRGF R T L Q R R 1 1 0 1 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 3 0 0 12 1 1281.7405 O00746 O00746 40 51 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 2 0.032846 108.9 By MS/MS 10 0 1 1 271390 271390 0 14027 107 14887 35621 25129 25129 1 288460 0 TLVEDLFADK YGFAIHHAGMTRVDRTLVEDLFADKHIQVL TRVDRTLVEDLFADKHIQVLVSTATLAWGV R T L D K H 1 0 0 2 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 10 0 1149.5918 O75643 O75643 795 804 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.021115 91.584 By MS/MS 2 0.816 1 1 1 3 219040 219040 0 14028 322 14888 35622;35623;35624 25130 25130 1 9077.3 0 TLVGICSEHQSR LLDMGETDLMLAALRTLVGICSEHQSRTVA ALRTLVGICSEHQSRTVATLSILGTRRVVS R T L S R T 0 1 0 0 1 1 1 1 1 1 1 0 0 0 0 2 1 0 0 1 0 0 12 0 1385.6721 Q9H3U1 Q9H3U1 218 229 UNC45A Protein unc-45 homolog A yes yes 2 1.8865E-05 172.8 By MS/MS 4 0 1 1 800010 800010 0 14029 2493 14889 35625 25131 25131 1 21839 0 TLVGLVR QMFSTNSFNEQEAKRTLVGLVRDLRGIAFA FNEQEAKRTLVGLVRDLRGIAFAFNAKTSF R T L V R D 0 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 2 0 0 7 0 756.48577 Q9UIA9 Q9UIA9 718 724 XPO7 Exportin-7 yes yes 2 0.04569 104.11 By MS/MS 4 0 1 1 662700 662700 0 14030 2790 14890 35626 25132 25132 1 18091 0 TLVGSENPPLTVIR IQSLLRANKARDDYKTLVGSENPPLTVIRK KTLVGSENPPLTVIRKFVYLLDQSDLDFQE K T L I R K 0 1 1 0 0 0 1 1 0 1 2 0 0 0 2 1 2 0 0 2 0 0 14 0 1494.8406 Q13576 Q13576 772 785 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 4.206E-12 222.72 By MS/MS 3 0 1 1 751050 751050 0 14031 1383 14891 35627 25133 25133 1 19606 0 TLVLFPNIDAGSK MFELTLDALISFNKRTLVLFPNIDAGSKEM KRTLVLFPNIDAGSKEMVRVMRKKGIEHHP R T L S K E 1 0 1 1 0 0 0 1 0 1 2 1 0 1 1 1 1 0 0 1 0 0 13 0 1373.7555 Q9Y223 Q9Y223 247 259 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 2 0.0043246 113.77 By MS/MS 4.5 0.5 1 1 2 1401400 1401400 0 14032 2862 14892 35628;35629 25134 25134 1 57316 0 TLVLIGAQGVGR QIYEEVAKMPPFQRKTLVLIGAQGVGRRSL QRKTLVLIGAQGVGRRSLKNRFIVLNPTRF K T L G R R 1 1 0 0 0 1 0 3 0 1 2 0 0 0 0 0 1 0 0 2 0 0 12 0 1182.7085 Q14168;Q9NZW5 Q9NZW5 340 351 MPP2;MPP6 MAGUK p55 subfamily member 2;MAGUK p55 subfamily member 6 no no 2 1.5623E-07 190.96 By MS/MS 6 0 1 1 1837200 1837200 0 14033 1415;2717 14893 35630 25135 25135 1 14326 0 TLVLLDNLNVR LLLPLLGAVCASGPRTLVLLDNLNVRETHS SGPRTLVLLDNLNVRETHSLFFRSLKDRGF R T L V R E 0 1 2 1 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 2 0 0 11 0 1268.7452 P39656 P39656 47 57 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 1.8844E-17 232.72 By MS/MS 7.5 1.12 1 1 1 1 4 29565000 29565000 0 14034 825 14894 35631;35632;35633;35634 25136;25137;25138 25136 3 232630 0 TLVLLMGK GGAPTFNVTVTKTDKTLVLLMGKEGVHGGL TVTKTDKTLVLLMGKEGVHGGLINKKCYEM K T L G K E 0 0 0 0 0 0 0 1 0 0 3 1 1 0 0 0 1 0 0 1 0 0 8 0 873.53576 P07737;CON__P02584 P07737 109 116 PFN1 Profilin-1 yes no 2 0.042135 86.794 By MS/MS 10 0 1 1 947840 947840 0 14035 491 14895 35635 25139 25139 284 1 1007500 0 TLVNPANVTFK LVPLMFGSLTVEKLKTLVNPANVTFKTYEG EKLKTLVNPANVTFKTYEGMMHSSCQQEMM K T L F K T 1 0 2 0 0 0 0 0 0 0 1 1 0 1 1 0 2 0 0 2 0 0 11 0 1202.6659 O75608 O75608 191 201 LYPLA1 Acyl-protein thioesterase 1 yes yes 2 0.0048335 108.43 By MS/MS 9.5 0.5 1 1 2 894520 894520 0 14036 320 14896 35636;35637 25140 25140 1 535200 0 TLVQILTEPR GRLPVVVPLHSLDEKTLVQILTEPRNAVIP SLDEKTLVQILTEPRNAVIPQYQALFSMDK K T L P R N 0 1 0 0 0 1 1 0 0 1 2 0 0 0 1 0 2 0 0 1 0 0 10 0 1168.6816 O76031 O76031 513 522 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00010861 164.66 By MS/MS 5.86 2.03 1 1 2 1 1 1 7 7573800 7573800 0 14037 344 14897 35638;35639;35640;35641;35642;35643;35644 25141;25142;25143;25144;25145 25142 5 341610 0 TLVTLGKEDLSIK VELYEDRKEGYPAVKTLVTLGKEDLSIKIS VKTLVTLGKEDLSIKISDLGGGVPLRKIDR K T L I K I 0 0 0 1 0 0 1 1 0 1 3 2 0 0 0 1 2 0 0 1 0 0 13 1 1415.8235 Q15120 Q15120 272 284 PDK3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 2 0.00037256 158.3 By MS/MS 7 0.816 1 1 1 3 5918100 5918100 0 14038 1481 14898 35645;35646;35647 25146;25147 25147 2 80792 0 TLWEDPGIQECYDR EKVTTFEHQYVSAIKTLWEDPGIQECYDRR KTLWEDPGIQECYDRRREYQLSDSAKYYLT K T L D R R 0 1 0 2 1 1 2 1 0 1 1 0 0 0 1 0 1 1 1 0 0 0 14 0 1780.7726 P29992 P29992 134 147 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 2 8.1138E-05 150.49 By MS/MS 7 0 1 1 1374000 1374000 0 14039 727 14899 35648 25148 25148 1 24553 0 TMAAEVLSR QPYGTRNAVLNTEARTMAAEVLSRRCVLMR LNTEARTMAAEVLSRRCVLMRLLDFSYEQY R T M S R R 2 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 9 0 976.50117 Q969V3 Q969V3 74 82 NCLN Nicalin yes yes 2 0.022213 103.7 By MS/MS 6 0 1 1 2018400 2018400 0 14040 2109 14900 35649 25149 25149 1 15740 0 TMASQVSIR LSKEGLIERTERMKKTMASQVSIRRIKDYD TERMKKTMASQVSIRRIKDYDANFKIKDFP K T M I R R 1 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 1 0 0 1 0 0 9 0 991.51206 Q9BRJ2 Q9BRJ2 115 123 MRPL45 39S ribosomal protein L45, mitochondrial yes yes 2 0.014846 95.775 By MS/MS 8 0 1 1 571890 571890 0 14041 2322 14901 35650 25150 25150 1461 1 37727 0 TMAVLQIEAEK IARNFYDSPEKIYERTMAVLQIEAEKAELR IYERTMAVLQIEAEKAELRVKELEVRKLMH R T M E K A 2 0 0 0 0 1 2 0 0 1 1 1 1 0 0 0 1 0 0 1 0 0 11 0 1231.6482 O43674 O43674 136 146 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 2 4.7897E-07 187.16 By MS/MS 10 0 1 1 540140 540140 0 14042 211 14902 35651 25151 25151 1 574110 0 TMAVLQIEAEKAELR IARNFYDSPEKIYERTMAVLQIEAEKAELR TMAVLQIEAEKAELRVKELEVRKLMHVRGD R T M L R V 3 1 0 0 0 1 3 0 0 1 2 1 1 0 0 0 1 0 0 1 0 0 15 1 1700.9131 O43674 O43674 136 150 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 3 0.02217 66.568 By MS/MS 10 0 2 2 1162600 1162600 0 14043 211 14903;14904 35652;35653 25152;25153 25152 129 2 1235700 0 TMCAVLGLVAR SCALPDSVLRRFVVRTMCAVLGLVARQEDS FVVRTMCAVLGLVARQEDSGLRDHSVRVLI R T M A R Q 2 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 1 0 0 2 0 0 11 0 1189.6311 Q9Y679 Q9Y679 68 78 AUP1 Ancient ubiquitous protein 1 yes yes 2 3.6642E-07 186.16 By MS/MS 7 0 2 2 3249600 3249600 0 14044 2997 14905;14906 35654;35655 25154;25155 25154 1727 2 58070 0 TMDILASLATSVDK LSLQKLWFYIQPAMRTMDILASLATSVDKG RTMDILASLATSVDKGECLGGSTLSLLHDR R T M D K G 2 0 0 2 0 0 0 0 0 1 2 1 1 0 0 2 2 0 0 1 0 0 14 0 1463.7541 Q9BSJ2 Q9BSJ2 334 347 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.0086841 90.434 By MS/MS 4 0 1 1 138760 138760 0 14045 2338 14907 35656 25156 25156 1464 1 3788 0 TMDLPFLEASTLR QFAQLYRSLMYSAQKTMDLPFLEASTLRAG QKTMDLPFLEASTLRAGERPELCRVSLPEF K T M L R A 1 1 0 1 0 0 1 0 0 0 3 0 1 1 1 1 2 0 0 0 0 0 13 0 1492.7596 P19174 P19174 227 239 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 1.1479E-08 194.17 By MS/MS 3.5 0.5 1 1 2 360400 360400 0 14046 628 14908 35657;35658 25157 25157 419 1 9458.7 0 TMGFCYQILTEPNADPR LLFTACSKRKEVLQKTMGFCYQILTEPNAD GFCYQILTEPNADPRKKDGALHMIGSLAEI K T M P R K 1 1 1 1 1 1 1 1 0 1 1 0 1 1 2 0 2 0 1 0 0 0 17 0 2011.9132 O95373 O95373 411 427 IPO7 Importin-7 yes yes 2 3.8662E-11 173.19 By MS/MS 4 0.816 1 1 1 3 1416500 1416500 0 14047 388 14909 35659;35660;35661 25158 25158 208 1 39709 0 TMGVMFTPLTVK SIKAYVSTLMGVPGRTMGVMFTPLTVKYAY PGRTMGVMFTPLTVKYAYYDTERIGVDLIM R T M V K Y 0 0 0 0 0 0 0 1 0 0 1 1 2 1 1 0 3 0 0 2 0 0 12 0 1323.6931 O00303 O00303 227 238 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 1.3873E-07 178.46 By MS/MS By MS/MS 7 0.632 1 3 1 4 1 21653000 21590000 63212 14048 88 14910;14911 35662;35663;35664;35665;35666 25159;25160;25161 25160 53;54 3 388340 259500 TMIQSPSGVILQEAADVHAR YTSGLETLLNIPIKRTMIQSPSGVILQEAA PSGVILQEAADVHARYIELLTRSGDYYRFL R T M A R Y 3 1 0 1 0 2 1 1 1 2 1 0 1 0 1 2 1 0 0 2 0 0 20 0 2122.0841 P15924 P15924 983 1002 DSP Desmoplakin yes yes 3 0.0057374 75.773 By MS/MS 2 0 1 1 242390 242390 0 14049 603 14912 35667 25162 25162 390 1 12048 0 TMKEDEKR IVGLSTVGAGAYAYKTMKEDEKRYNERISG AGAYAYKTMKEDEKRYNERISGLGLTPEQK K T M K R Y 0 1 0 1 0 0 2 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 8 2 1035.5019 O95831 O95831 87 94 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 1 0.041658 47.067 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 1602600 1397400 205260 14050 409 14913 35668;35669;35670;35671;35672 25163 25163 1 51128 205260 TMLELINQLDGFDPR ARFDDGAGGDNEVQRTMLELINQLDGFDPR TMLELINQLDGFDPRGNIKVLMATNRPDTL R T M P R G 0 1 1 2 0 1 1 1 0 1 3 0 1 1 1 0 1 0 0 0 0 0 15 0 1760.8767 P35998 P35998 298 312 PSMC2 26S protease regulatory subunit 7 yes yes 2 6.9367E-15 211.22 By MS/MS 6.33 0.471 2 1 3 1869000 1869000 0 14051 801 14914;14915 35673;35674;35675 25164;25165;25166 25164 549 3 17101 0 TMLELLNQLDGFDSR KRYDSNSGGEREIQRTMLELLNQLDGFDSR TMLELLNQLDGFDSRGDVKVIMATNRIETL R T M S R G 0 1 1 2 0 1 1 1 0 0 4 0 1 1 0 1 1 0 0 0 0 0 15 0 1750.856 P62191 P62191 308 322 PSMC1 26S protease regulatory subunit 4 yes yes 2 5.9103E-92 332.56 By MS/MS 6 0 3 3 3358400 3358400 0 14052 1116 14916;14917 35676;35677;35678 25167;25168;25169 25169 867 3 26189 0 TMLELLNQLDGFDSRGDVK KRYDSNSGGEREIQRTMLELLNQLDGFDSR LLNQLDGFDSRGDVKVIMATNRIETLDPAL R T M V K V 0 1 1 3 0 1 1 2 0 0 4 1 1 1 0 1 1 0 0 1 0 0 19 1 2150.0678 P62191 P62191 308 326 PSMC1 26S protease regulatory subunit 4 yes yes 2;3 0.00027587 119.96 By MS/MS 6 0 3 3 2644500 2644500 0 14053 1116 14918;14919 35679;35680;35681 25170;25171;25172 25171 867 3 20622 0 TMLELLNQLDGFEATK SRLEGGSGGDSEVQRTMLELLNQLDGFEAT MLELLNQLDGFEATKNIKVIMATNRIDILD R T M T K N 1 0 1 1 0 1 2 1 0 0 4 1 1 1 0 0 2 0 0 0 0 0 16 0 1821.9183 P62195 P62195 272 287 PSMC5 26S protease regulatory subunit 8 yes yes 2 2.2426E-39 267.93 By MS/MS 6.5 0.5 1 1 2 719670 719670 0 14054 1117 14920;14921 35682;35683 25173;25174 25174 871 2 10461 0 TMLELLNQLDGFQPNTQVK KRFDSEKAGDREVQRTMLELLNQLDGFQPN LLNQLDGFQPNTQVKVIAATNRVDILDPAL R T M V K V 0 0 2 1 0 3 1 1 0 0 4 1 1 1 1 0 2 0 0 1 0 0 19 0 2188.1198 P17980 P17980 309 327 PSMC3 26S protease regulatory subunit 6A yes yes 2;3 1.2746E-56 285.75 By MS/MS 6 0 3 3 5231700 5231700 0 14055 618 14922;14923 35684;35685;35686 25175;25176;25177;25178 25175 406 4 40797 0 TMLESAGGLIQTAR PEGRAAMEPIVISAKTMLESAGGLIQTARA KTMLESAGGLIQTARALAVNPRDPPSWSVL K T M A R A 2 1 0 0 0 1 1 2 0 1 2 0 1 0 0 1 2 0 0 0 0 0 14 0 1446.7501 Q9Y490 Q9Y490 1605 1618 TLN1 Talin-1 yes yes 2 3.3391E-18 222.2 By MS/MS 2 0.707 1 2 1 4 1999300 1999300 0 14056 2947 14924;14925 35687;35688;35689;35690 25179;25180;25181 25179 1694 3 90595 0 TMLESLIADK RRAVGPSSTQLYMVRTMLESLIADKSGSKK LYMVRTMLESLIADKSGSKKTLRSSLEGPT R T M D K S 1 0 0 1 0 0 1 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 10 0 1119.5846 Q7L576;Q96F07 Q7L576 564 573 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.0043235 109.66 By MS/MS 3 0 1 1 245790 245790 0 14057 1765 14926 35691 25182 25182 1 6416.4 0 TMMACGGSIQTSVNALSADVLGR DMFCAGRVPEEDLKRTMMACGGSIQTSVNA IQTSVNALSADVLGRCQVFEETQIGGERYN R T M G R C 3 1 1 1 1 1 0 3 0 1 2 0 2 0 0 3 2 0 0 2 0 0 23 0 2338.1079 Q99832 Q99832 322 344 CCT7 T-complex protein 1 subunit eta yes yes 2;3 1.2171E-39 222.09 By MS/MS 6 0 4 4 14376000 14376000 0 14058 2295 14927;14928;14929 35692;35693;35694;35695 25183;25184;25185;25186 25183 1447;1448 3 112110 0 TMQNLEIELQSQLSMK ELVQSGKSEISELRRTMQNLEIELQSQLSM MQNLEIELQSQLSMKASLENSLEETKGRYC R T M M K A 0 0 1 0 0 3 2 0 0 1 3 1 2 0 0 2 1 0 0 0 0 0 16 0 1891.9383 CON__P02533;P02533 CON__P02533 337 352 KRT14 Keratin, type I cytoskeletal 14 yes no 2;3 0.0030036 93.181 By MS/MS 3 0 2 2 169340 0 169340 + 14059 35 14930 35696;35697 25187;25188;25189 25188 17;18 3 0 242700 TMQNTSDLDTAR RALMGSPQLVAAVVRTMQNTSDLDTARCTT VVRTMQNTSDLDTARCTTSILHNLSHHREG R T M A R C 1 1 1 2 0 1 0 0 0 0 1 0 1 0 0 1 3 0 0 0 0 0 12 0 1351.6038 P14923 P14923 192 203 JUP Junction plakoglobin yes yes 2 0.0038467 114.76 By matching By MS/MS 4.25 0.829 1 1 2 1 3 344470 186480 157990 14060 595 14931 35698;35699;35700;35701 25190 25190 1 7665.2 300820 TMSLQQVINAR LCHRKLVTTSETYVKTMSLQQVINARNALA TYVKTMSLQQVINARNALAKHIYAQLFGWI K T M A R N 1 1 1 0 0 2 0 0 0 1 1 0 1 0 0 1 1 0 0 1 0 0 11 0 1259.6656 Q9ULV0 Q9ULV0 391 401 MYO5B Unconventional myosin-Vb yes yes 2 0.047567 89.029 By MS/MS 2 0 1 1 0 0 0 14061 2827 14932 35702 25191 25191 1 0 0 TMTLFSALR EHKPLVLCGPPGSGKTMTLFSALRALPDME PPGSGKTMTLFSALRALPDMEVVGLNFSSA K T M L R A 1 1 0 0 0 0 0 0 0 0 2 0 1 1 0 1 2 0 0 0 0 0 9 0 1038.5532 Q14204 Q14204 2602 2610 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.8855E-11 219.25 By MS/MS 2 0.816 1 1 1 3 2777900 2777900 0 14062 1421 14933 35703;35704;35705 25192;25193 25192 1119 2 130490 0 TMVQELLDFK KAFGSTIVINPEKDKTMVQELLDFKDKVDH PEKDKTMVQELLDFKDKVDHIIDICFLKNE K T M F K D 0 0 0 1 0 1 1 0 0 0 2 1 1 1 0 0 1 0 0 1 0 0 10 0 1222.6268 Q13620 Q13620 514 523 CUL4B Cullin-4B yes yes 2 0.0010272 121.6 By MS/MS 4.5 0.5 1 1 2 96983 96983 0 14063 1390 14934 35706;35707 25194;25195 25194 2 3119 0 TMVQLFEK RRLSALHPPEKHGGRTMVQLFEKGYGKDAA PEKHGGRTMVQLFEKGYGKDAAGIAMEAIA R T M E K G 0 0 0 0 0 1 1 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 8 0 994.51575 P08240 P08240 485 492 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.023634 101.46 By MS/MS 5 0 1 1 419660 419660 0 14064 502 14935 35708 25196 25196 1 17250 0 TMYLLGYIPK YYVGGEIVTIAHLDRTMYLLGYIPKDNRLY AHLDRTMYLLGYIPKDNRLYLGDKELNIIS R T M P K D 0 0 0 0 0 0 0 1 0 1 2 1 1 0 1 0 1 0 2 0 0 0 10 0 1197.6468 P35606 P35606 560 569 COPB2 Coatomer subunit beta yes yes 2 0.00048632 136.27 By MS/MS 2.5 1.12 1 1 1 1 4 440450 440450 0 14065 795 14936 35709;35710;35711;35712 25197 25197 546 1 18362 0 TNAENEFVTIK VEDYRNKYEDEINKRTNAENEFVTIKKDVD INKRTNAENEFVTIKKDVDGAYMTKVDLQA R T N I K K 1 0 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 11 0 1264.6299 P04264;CON__P04264 P04264 278 288 KRT1 Keratin, type II cytoskeletal 1 no no 2 9.5769E-12 213.35 By MS/MS By MS/MS 5.42 2.93 2 2 2 2 2 2 1 2 2 2 9 10 53639000 24048000 29591000 + 14066 450;45 14937 35713;35714;35715;35716;35717;35718;35719;35720;35721;35722;35723;35724;35725;35726;35727;35728;35729;35730;35731 25198;25199;25200;25201;25202;25203;25204;25205;25206;25207;25208;25209;25210;25211;25212;25213;25214;25215;25216;25217 25215 20 5500800 85435000 TNAENEFVTIKK VEDYRNKYEDEINKRTNAENEFVTIKKDVD NKRTNAENEFVTIKKDVDGAYMTKVDLQAK R T N K K D 1 0 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 0 12 1 1392.7249 P04264;CON__P04264 P04264 278 289 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 9.3014E-33 266.26 By MS/MS By MS/MS 5.2 2.89 4 4 4 4 4 2 3 4 3 3 16 19 206600000 100870000 105730000 + 14067 450;45 14938 35732;35733;35734;35735;35736;35737;35738;35739;35740;35741;35742;35743;35744;35745;35746;35747;35748;35749;35750;35751;35752;35753;35754;35755;35756;35757;35758;35759;35760;35761;35762;35763;35764;35765;35766 25218;25219;25220;25221;25222;25223;25224;25225;25226;25227;25228;25229;25230;25231;25232;25233;25234;25235;25236;25237;25238;25239;25240;25241;25242;25243;25244;25245;25246;25247;25248;25249;25250;25251 25238 33 29925000 258190000 TNAIDFLMDR VYLQREVFLGTLNDRTNAIDFLMDRNNVVP TLNDRTNAIDFLMDRNNVVPRINTLILRTN R T N D R N 1 1 1 2 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 10 0 1194.5703 Q9NYU1 Q9NYU1 666 675 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 2 0.029119 86.014 By MS/MS 3 0 1 1 71191 71191 0 14068 2698 14939 35767 25252 25252 1 1858.5 0 TNAQAAPKPR REVRRAASSVPNLKKTNAQAAPKPRKAPST PNLKKTNAQAAPKPRKAPSTSHSGFPPVAN K T N P R K 3 1 1 0 0 1 0 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 10 1 1052.5727 Q66K74 Q66K74 554 563 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.0094458 119.62 By MS/MS 3 0 1 1 159220 159220 0 14069 1670 14940 35768 25253 25253 1 4156.5 0 TNATNNMNLSR SSLESFVRRVANIARTNATNNMNLSRSSSD NIARTNATNNMNLSRSSSDNNTNTLGRNVM R T N S R S 1 1 4 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 0 0 11 0 1234.5724 Q9ULT8 Q9ULT8 1558 1568 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 2 0.0020872 115.91 By MS/MS 2 0 2 2 634930 634930 0 14070 2826 14941;14942 35769;35770 25254;25255 25254 1632 2 31559 0 TNDEVIHGIFK ISFNFWYRLGEHLYKTNDEVIHGIFKAYIQ HLYKTNDEVIHGIFKAYIQRLLHALARHCQ K T N F K A 0 0 1 1 0 0 1 1 1 2 0 1 0 1 0 0 1 0 0 1 0 0 11 0 1271.651 Q9Y5L0 Q9Y5L0 356 366 TNPO3 Transportin-3 yes yes 2;3 0.00049957 158.47 By MS/MS 4 0 2 2 2055000 2055000 0 14071 2974 14943 35771;35772 25256;25257 25256 2 56099 0 TNDQDGLISGILR IYEQEGVYIHSSCGKTNDQDGLISGILRVL GKTNDQDGLISGILRVLEKDAEVIVDWRPL K T N L R V 0 1 1 2 0 1 0 2 0 2 2 0 0 0 0 1 1 0 0 0 0 0 13 0 1400.726 Q8TC07 Q8TC07 27 39 TBC1D15 TBC1 domain family member 15 yes yes 2 4.0287E-25 234.24 By MS/MS 4.5 0.5 1 1 2 2734900 2734900 0 14072 1991 14944 35773;35774 25258 25258 1 111820 0 TNEAQAIETAR NPDDPLANDVAEQWKTNEAQAIETARAWTR EQWKTNEAQAIETARAWTRLYAMNNI____ K T N A R A 3 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 11 0 1202.5891 P61088;Q5JXB2 P61088 131 141 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 2 4.1595E-11 209.8 By MS/MS 10 0 1 1 572910 572910 0 14073 1087 14945 35775 25259 25259 1 608940 0 TNFYAEQGGQASDR ASVGKGQRCGLLLDRTNFYAEQGGQASDRG RTNFYAEQGGQASDRGYLVRAGQEDVLFPV R T N D R G 2 1 1 1 0 2 1 2 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1542.6699 Q5JTZ9 Q5JTZ9 562 575 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 6.3206E-73 359.73 By MS/MS 4.5 1.12 1 1 1 1 4 8171700 8171700 0 14074 1611 14946 35776;35777;35778;35779 25260;25261;25262 25260 3 213930 0 TNHFAIVNLR HGHLGDIDQDVEVEKTNHFAIVNLRTAAPT VEVEKTNHFAIVNLRTAAPTVCLLVLSQAE K T N L R T 1 1 2 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1183.6462 Q9NVI1 Q9NVI1 1069 1078 FANCI Fanconi anemia group I protein yes yes 2 0.0025155 120.99 By MS/MS 3 0 1 1 699310 699310 0 14075 2654 14947 35780 25263 25263 1 18256 0 TNHIETLGK YDILMEKLSVMLSTRTNHIETLGKLREELG VMLSTRTNHIETLGKLREELGLCERTFKRL R T N G K L 0 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 2 0 0 0 0 0 9 0 1011.5349 Q12789 Q12789 270 278 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.0047473 107.55 By MS/MS 2 0 1 1 251040 251040 0 14076 1306 14948 35781 25264 25264 1 12478 0 TNHIYVSSDDIK EWRVRAISAANLHLRTNHIYVSSDDIKETG HLRTNHIYVSSDDIKETGYTYILPKNVLKK R T N I K E 0 0 1 2 0 0 0 0 1 2 0 1 0 0 0 2 1 0 1 1 0 0 12 0 1390.6729 Q6P2Q9 Q6P2Q9 2087 2098 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.012847 93.839 By MS/MS 2 0 1 1 274020 274020 0 14077 1706 14949 35782 25265 25265 1 13620 0 TNIAIFCETR FNFGNGLQMLGQKPKTNIAIFCETRAEWMI GQKPKTNIAIFCETRAEWMIAAQACFMYNF K T N T R A 1 1 1 0 1 0 1 0 0 2 0 0 0 1 0 0 2 0 0 0 0 0 10 0 1223.5969 O95573 O95573 160 169 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 2.9261E-05 173.64 By MS/MS 3 2 1 1 2 8928600 8928600 0 14078 400 14950 35783;35784 25266;25267 25266 2 369420 0 TNIIPVLEDAR SHRAGRDLVNVAKKRTNIIPVLEDARHPLK AKKRTNIIPVLEDARHPLKYRMLIGMVDVI R T N A R H 1 1 1 1 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 1 0 0 11 0 1239.6823 A6NHQ2 A6NHQ2 220 230 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 yes yes 2 0.0067463 101.3 By MS/MS 7.5 0.5 1 1 2 935360 935360 0 14079 23 14951 35785;35786 25268 25268 1 54837 0 TNLEDVGR GKYGALVICETSEQKTNLEDVGRRLGQHVV CETSEQKTNLEDVGRRLGQHVVGMAPLSVG K T N G R R 0 1 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 902.44576 P43897 P43897 247 254 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.0041326 141.52 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 11360000 11323000 37121 14080 868 14952 35787;35788;35789;35790 25269;25270 25270 2 839930 316690 TNLEDVGRR GKYGALVICETSEQKTNLEDVGRRLGQHVV ETSEQKTNLEDVGRRLGQHVVGMAPLSVGS K T N R R L 0 2 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 1 1058.5469 P43897 P43897 247 255 TSFM Elongation factor Ts, mitochondrial yes yes 2 0.0046562 138.4 By MS/MS 8 0 1 1 8732300 8732300 0 14081 868 14953 35791 25271 25271 1 576070 0 TNLIFLSGNR QVIKILGTEKGKKNRTNLIFLSGNRVLKWM GKKNRTNLIFLSGNRVLKWMERSHGTEKAL R T N N R V 0 1 2 0 0 0 0 1 0 1 2 0 0 1 0 1 1 0 0 0 0 0 10 0 1133.6193 Q9BTE6 Q9BTE6 236 245 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 2 0.0003193 152.04 By MS/MS 7 0.816 1 1 1 3 2294200 2294200 0 14082 2350 14954 35792;35793;35794 25272 25272 1 33842 0 TNLLDELPQSVLK WEQNLKDPVAVQTAKTNLLDELPQSVLKWA AKTNLLDELPQSVLKWAPSGSSCCEIAQFL K T N L K W 0 0 1 1 0 1 1 0 0 0 4 1 0 0 1 1 1 0 0 1 0 0 13 0 1468.8137 Q86Y07 Q86Y07 265 277 VRK2 Serine/threonine-protein kinase VRK2 yes yes 2 2.141E-05 168.98 By MS/MS 7 0.816 1 1 1 3 1601900 1601900 0 14083 1843 14955 35795;35796;35797 25273 25273 1 17506 0 TNLLQVCER LAKEVAKQCTDKRIRTNLLQVCERIPTIST TDKRIRTNLLQVCERIPTISTQLKILSTVK R T N E R I 0 1 1 0 1 1 1 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1131.5706 P18206 P18206 1047 1055 VCL Vinculin yes yes 2 0.010901 111.06 By MS/MS 4 0 1 1 0 0 0 14084 623 14956 35798 25274 25274 1 0 0 TNLQPLESTQSQDF GTFLTQALNHMYKLRTNLQPLESTQSQDF_ RTNLQPLESTQSQDF_______________ R T N D F - 0 0 1 1 0 3 1 0 0 0 2 0 0 1 1 2 2 0 0 0 0 0 14 0 1606.7475 Q9Y248 Q9Y248 172 185 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 0.00061799 130.69 By MS/MS 9 0 1 1 658450 658450 0 14085 2867 14957 35799 25275 25275 1 377890 0 TNLSVHEDK EIYLDKIRDLLDVSKTNLSVHEDKNRVPYV LLDVSKTNLSVHEDKNRVPYVKGCTERFVC K T N D K N 0 0 1 1 0 0 1 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 9 0 1041.5091 P33176;Q12840 P33176 151 159 KIF5B;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A yes no 2 0.02594 97.965 By MS/MS 4 0 1 1 0 0 0 14086 767 14958 35800 25276 25276 1 0 0 TNMLVQFLMEMYKMKK LSSTVQSRTDPLIMKTNMLVQFLMEMYKMK NMLVQFLMEMYKMKKPIMKADMLKIVQKSH K T N K K P 0 0 1 0 0 1 1 0 0 0 2 3 4 1 0 0 1 0 1 1 0 0 16 2 2034.0175 O15480 O15480 115 130 MAGEB3 Melanoma-associated antigen B3 yes yes 2 0.034593 47.288 By MS/MS 1.5 0.5 1 1 2 1980500 1980500 0 14087 178 14959 35801;35802 25277;25278 25277 107;108;109 2 98026 0 TNNPLPLEQR SQLLAATCLTKLVSRTNNPLPLEQRIDIRN KLVSRTNNPLPLEQRIDIRNYVLNYLATRP R T N Q R I 0 1 2 0 0 1 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 0 10 0 1180.62 Q9UIA9 Q9UIA9 74 83 XPO7 Exportin-7 yes yes 2 0.0047929 125.68 By MS/MS 4 0 1 1 0 0 0 14088 2790 14960 35803 25279 25279 1 0 0 TNNVSEHEDTDKYR NVEELVIVLKKEVIKTNNVSEHEDTDKYRQ KTNNVSEHEDTDKYRQLLVRTLHSCSVRFP K T N Y R Q 0 1 2 2 0 0 2 0 1 0 0 1 0 0 0 1 2 0 1 1 0 0 14 1 1706.7496 P53618 P53618 367 380 COPB1 Coatomer subunit beta yes yes 2;3 4.9736E-11 196.02 By MS/MS By matching 4.4 0.49 3 2 4 1 8269600 8250900 18766 14089 1004 14961 35804;35805;35806;35807;35808 25280;25281 25281 2 238890 39214 TNQELQEINR LGTDEDSLIEIICSRTNQELQEINRVYKEM IICSRTNQELQEINRVYKEMYKTDLEKDII R T N N R V 0 1 2 0 0 2 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1243.6157 P07355;A6NMY6 P07355 136 145 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 2 1.4201E-09 197.79 By MS/MS 8 0 1 1 0 0 0 14090 488 14962 35809 25282 25282 1 0 0 TNQFSVTR VVPTVYMKVDGEVLRTNQFSVTRHEKVANG VDGEVLRTNQFSVTRHEKVANGLLGDQGLP R T N T R H 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 8 0 951.47739 Q9Y282 Q9Y282 297 304 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes yes 2 0.0085342 127.68 By MS/MS 6 0 1 1 0 0 0 14091 2874 14963 35810 25283 25283 1 0 0 TNQVQEENEVLR MPVPVILNFDAECQRTNQVQEENEVLRQKL CQRTNQVQEENEVLRQKLFALQAEIHRLKK R T N L R Q 0 1 2 0 0 2 3 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 12 0 1457.711 A4D1P6 A4D1P6 185 196 WDR91 WD repeat-containing protein 91 yes yes 2 2.5279E-11 209.19 By MS/MS 4 2 1 1 1 1 1 1 1 7 9575600 9575600 0 14092 15 14964 35811;35812;35813;35814;35815;35816;35817 25284 25284 1 252620 0 TNQYGILFK ______________________________ ______________________________ M T N F K Q 0 0 1 0 0 1 0 1 0 1 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1082.576 Q9GZS3 Q9GZS3 2 10 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 2 0.00029845 146.69 By MS/MS 8 0 1 1 1820200 1820200 0 14093 2442 14965 35818 25285 25285 1 120080 0 TNRPPLSLSR STFNQVVLKRLFMSRTNRPPLSLSRMIRKM LFMSRTNRPPLSLSRMIRKMKLPGRENKTA R T N S R M 0 2 1 0 0 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 1 1139.6411 Q07020 Q07020 56 65 RPL18 60S ribosomal protein L18 yes yes 3 0.016355 99.752 By MS/MS By matching 9 0 2 1 1 723650 693820 29835 14094 1278 14966 35819;35820 25286 25286 1 398190 321530 TNSTFNQVVLK YLRLLVKLYRFLARRTNSTFNQVVLKRLFM LARRTNSTFNQVVLKRLFMSRTNRPPLSLS R T N L K R 0 0 2 0 0 1 0 0 0 0 1 1 0 1 0 1 2 0 0 2 0 0 11 0 1249.6667 Q07020 Q07020 39 49 RPL18 60S ribosomal protein L18 yes yes 2 2.6225E-05 172.98 By MS/MS 9 0 1 1 660380 660380 0 14095 1278 14967 35821 25287 25287 1 379000 0 TNTCGELR SSQRRIPEFSSFVVRTNTCGELRSSHLGQE FSSFVVRTNTCGELRSSHLGQEVTLCGWIQ R T N L R S 0 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 0 0 0 8 0 949.42873 Q6PI48 Q6PI48 51 58 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2 0.040264 98.629 By MS/MS 5 0 1 1 0 0 0 14096 1715 14968 35822 25288 25288 1 0 0 TNTPVKEDWNVR PELLTHSTTEVTQPRTNTPVKEDWNVRITK QPRTNTPVKEDWNVRITKLRKQVEEIFNLK R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 2;3 0.0012425 154.15 By MS/MS 3.33 0.471 2 1 3 2663100 2663100 0 14097 1194 14969 35823;35824;35825 25289;25290 25289 2 70469 0 TNVALMCMLR TDENLLLCAPTGAGKTNVALMCMLREIGKH TGAGKTNVALMCMLREIGKHINMDGTINVD K T N L R E 1 1 1 0 1 0 0 0 0 0 2 0 2 0 0 0 1 0 0 1 0 0 10 0 1207.5876 O75643 O75643 510 519 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0012933 106.2 By MS/MS 1.5 0.5 1 1 2 388470 388470 0 14098 322 14970 35826;35827 25291;25292 25292 183;184 2 19118 0 TNVIQSLLAR QEGVFRSNCMDCLDRTNVIQSLLARRSLQA DCLDRTNVIQSLLARRSLQAQLQRLGVLHV R T N A R R 1 1 1 0 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1113.6506 Q9NTJ5 Q9NTJ5 396 405 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 9.3605E-07 183.72 By MS/MS 3.33 2.05 1 1 1 3 2004700 2004700 0 14099 2631 14971 35828;35829;35830 25293;25294;25295 25295 3 22622 0 TNVNGGAIALGHPLGGSGSR QYLAVERSLDLDISKTNVNGGAIALGHPLG GAIALGHPLGGSGSRITAHLVHELRRRGGK K T N S R I 2 1 2 0 0 0 0 6 1 1 2 0 0 0 1 2 1 0 0 1 0 0 20 0 1833.9446 P42765 P42765 341 360 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 3 0.048958 52.19 By MS/MS 7 0 1 1 1829300 1829300 0 14100 855 14972 35831 25296 25296 1 32690 0 TPADCPVIAIDSFR ADCDKFRHPLLHIQKTPADCPVIAIDSFRH KTPADCPVIAIDSFRHMYVFGDFKDVLIPG K T P F R H 2 1 0 2 1 0 0 0 0 2 0 0 0 1 2 1 1 0 0 1 0 0 14 0 1560.7606 Q9BS26 Q9BS26 314 327 ERP44 Endoplasmic reticulum resident protein 44 yes yes 2 1.2643E-12 210.95 By MS/MS 7 0 1 1 2554200 2554200 0 14101 2334 14973 35832 25297 25297 1 45644 0 TPAEASSTGQTGPQSAL ESGPPPESMPKMPPRTPAEASSTGQTGPQS AEASSTGQTGPQSAL_______________ R T P A L - 3 0 0 0 0 2 1 2 0 0 1 0 0 0 2 3 3 0 0 0 0 0 17 0 1601.7533 Q9Y676 Q9Y676 242 258 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 1.4579E-18 205.31 By MS/MS 8 0 1 1 1453100 1453100 0 14102 2995 14974 35833 25298 25298 1 95859 0 TPAFAESVTEGDVR FRTTAVCKDDLVTVKTPAFAESVTEGDVRW KTPAFAESVTEGDVRWEKAVGDTVAEDEVV K T P V R W 2 1 0 1 0 0 2 1 0 0 0 0 0 1 1 1 2 0 0 2 0 0 14 0 1477.7049 P36957 P36957 75 88 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 1.7272E-25 234.3 By MS/MS By MS/MS 6.5 0.5 2 2 2 2 9386200 9152000 234280 14103 812 14975 35834;35835;35836;35837 25299;25300;25301;25302 25302 4 76388 763680 TPAFAESVTEGDVRWEK FRTTAVCKDDLVTVKTPAFAESVTEGDVRW AFAESVTEGDVRWEKAVGDTVAEDEVVCEI K T P E K A 2 1 0 1 0 0 3 1 0 0 0 1 0 1 1 1 2 1 0 2 0 0 17 1 1920.9218 P36957 P36957 75 91 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2;3 1.1273E-05 164.13 By MS/MS 6 0 2 2 13463000 13463000 0 14104 812 14976 35838;35839 25303;25304 25304 2 104980 0 TPAILISEVVR ELYSRWILPSSSARRTPAILISEVVRSLLV SARRTPAILISEVVRSLLVVSDLFTERNQF R T P V R S 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 1 1 0 0 2 0 0 11 0 1196.7129 P42858 P42858 2692 2702 HTT Huntingtin yes yes 2 0.0038139 112.71 By MS/MS 1 0 1 1 149970 149970 0 14105 858 14977 35840 25305 25305 1 7327.3 0 TPALVNAAVTYSK ______________________________ EKTPALVNAAVTYSKPRLATFWYYAKVELV K T P S K P 3 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 1 2 0 0 13 0 1333.7242 O75964 O75964 12 24 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 4.4288E-12 209.19 By MS/MS 10 0 1 1 346470 346470 0 14106 341 14978 35841 25306 25306 1 368260 0 TPALVNAAVTYSKPR ______________________________ TPALVNAAVTYSKPRLATFWYYAKVELVPP K T P P R L 3 1 1 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 1 2 0 0 15 1 1586.878 O75964 O75964 12 26 ATP5L ATP synthase subunit g, mitochondrial yes yes 2;3 0.0045794 103.97 By MS/MS 10 0 2 2 1073900 1073900 0 14107 341 14979 35842;35843 25307;25308 25307 2 1141500 0 TPASINATPANINLADLTR DPVPGITPSSSSRTRTPASINATPANINLA INATPANINLADLTRAVNALPQNMTSQMFS R T P T R A 4 1 3 1 0 0 0 0 0 2 2 0 0 0 2 1 3 0 0 0 0 0 19 0 1952.0327 Q7KZ85 Q7KZ85 1532 1550 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.0021997 100.4 By MS/MS 2 0 1 1 161010 161010 0 14108 1756 14980 35844 25309 25309 1 8003.1 0 TPCNAGTFSQPEK VTGSWDQTVKLWDPRTPCNAGTFSQPEKVY PRTPCNAGTFSQPEKVYTLSVSGDRLIVGT R T P E K V 1 0 1 0 1 1 1 1 0 0 0 1 0 1 2 1 2 0 0 0 0 0 13 0 1435.6402 O43684 O43684 127 139 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 7.1719E-06 174.23 By MS/MS 8 0.816 1 1 1 3 2719900 2719900 0 14109 216 14981 35845;35846;35847 25310;25311 25311 2 202690 0 TPDGNLDQCK LWHSEEASLDADQARTPDGNLDQCK_____ ADQARTPDGNLDQCK_______________ R T P C K - 0 0 1 2 1 1 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 10 0 1146.4975 P30825 P30825 620 629 SLC7A1 High affinity cationic amino acid transporter 1 yes yes 2 0.00035075 150.81 By MS/MS 2.5 1.12 1 1 1 1 4 1145300 1145300 0 14110 746 14982 35848;35849;35850;35851 25312;25313 25313 2 49089 0 TPDGQGLSTYK VSGETVVFQGGALGKTPDGQGLSTYKELCS ALGKTPDGQGLSTYKELCSLASDLSQPDLV K T P Y K E 0 0 0 1 0 1 0 2 0 0 1 1 0 0 1 1 2 0 1 0 0 0 11 0 1165.5615 Q5VYK3 Q5VYK3 1057 1067 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 6.8656E-16 215.06 By MS/MS 2.5 0.5 1 1 2 3081500 3081500 0 14111 1657 14983 35852;35853 25314;25315 25314 2 88781 0 TPEASPEPK SMETEEKTSSAFVGKTPEASPEPKDQTLKM SAFVGKTPEASPEPKDQTLKMIKILSGEMA K T P P K D 1 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 0 0 0 9 0 954.46583 Q99460 Q99460 311 319 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.0348 88.37 By MS/MS 1.5 0.5 1 1 2 131490 131490 0 14112 2268 14984 35854;35855 25316 25316 1 6468 0 TPEAVQK APHATLPRLLRASGRTPEAVQKLLEQGLRH RLLRASGRTPEAVQKLLEQGLRHSQDLAFL R T P Q K L 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 7 0 771.41267 P49327 P49327 430 436 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0050633 179.16 By MS/MS By matching 2.4 1.02 1 2 1 1 4 1 10126000 10115000 11760 14113 915 14985 35856;35857;35858;35859;35860 25317;25318;25319;25320 25317 4 486790 9900.6 TPEDFLK VSAHSAKVKIAEFSRTPEDFLKKYDELKSK VKIAEFSRTPEDFLKKYDELKSKNTRNLDP R T P L K K 0 0 0 1 0 0 1 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 7 0 848.42798 Q9BSJ2 Q9BSJ2 59 65 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.020651 124.59 By MS/MS 4 0 1 1 826470 826470 0 14114 2338 14986 35861 25321 25321 1 22562 0 TPEDFVFPLLPNEELR VGVGVSCMAQDCPLRTPEDFVFPLLPNEEL PEDFVFPLLPNEELREKYRRYLFRDYVESH R T P L R E 0 1 1 1 0 0 3 0 0 0 3 0 0 2 3 0 1 0 0 1 0 0 16 0 1914.9727 O95376 O95376 192 207 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 2 2.0738E-06 154.36 By MS/MS 6 0 1 1 920950 920950 0 14115 389 14987 35862 25322;25323 25323 2 7181.6 0 TPEDFVFPLLPNEELREK VGVGVSCMAQDCPLRTPEDFVFPLLPNEEL DFVFPLLPNEELREKYRRYLFRDYVESHYQ R T P E K Y 0 1 1 1 0 0 4 0 0 0 3 1 0 2 3 0 1 0 0 1 0 0 18 1 2172.1103 O95376 O95376 192 209 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 3 0.0026533 95.073 By MS/MS 6 0 1 1 785920 785920 0 14116 389 14988 35863 25324 25324 1 6128.6 0 TPEELFHPLGADSQV IASGFRQGGASQSDKTPEELFHPLGADSQV TPEELFHPLGADSQV_______________ K T P Q V - 1 0 0 1 0 1 2 1 1 0 2 0 0 1 2 1 1 0 0 1 0 0 15 0 1638.789 P11166 P11166 478 492 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 yes yes 2 0.054708 73.9 By MS/MS 1 0 1 1 68371 68371 0 14117 547 14989 35864 25325 25325 1 3340.5 0 TPEILTVNSIGQLK DNADSSTLHAVTFLRTPEILTVNSIGQLKI RTPEILTVNSIGQLKIWDFRQQGNEPSQIL R T P L K I 0 0 1 0 0 1 1 1 0 2 2 1 0 0 1 1 2 0 0 1 0 0 14 0 1511.8559 Q8NFH3 Q8NFH3 183 196 NUP43 Nucleoporin Nup43 yes yes 2 2.0726E-35 265 By MS/MS 7.5 0.5 1 1 2 1993000 1993000 0 14118 1971 14990 35865;35866 25326 25326 1 41823 0 TPEIVAPQSAHAAFNK ACKAYRDLAFEKGIKTPEIVAPQSAHAAFN PEIVAPQSAHAAFNKAASYFGMKIVRVPLT K T P N K A 4 0 1 0 0 1 1 0 1 1 0 1 0 1 2 1 1 0 0 1 0 0 16 0 1679.8631 O95470 O95470 232 247 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 3 0.0062049 90.229 By MS/MS 6 0 1 1 6493200 6493200 0 14119 395 14991 35867 25327 25327 1 50634 0 TPEIYLAYR RRALPEFFNGKNKSKTPEIYLAYRNFMIDT GKNKSKTPEIYLAYRNFMIDTYRLNPQEYL K T P Y R N 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 0 1 0 2 0 0 0 9 0 1124.5866 Q8TAQ2;Q92922 Q92922 483 491 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 2 0.00022853 162.25 By MS/MS 3 0 1 1 952350 952350 0 14120 2090;1983 14992 35868 25328 25328 1 24861 0 TPELNLDQFHDK NGIECGGAYVKLLSKTPELNLDQFHDKTPY LSKTPELNLDQFHDKTPYTIMFGPDKCGED K T P D K T 0 0 1 2 0 1 1 0 1 0 2 1 0 1 1 0 1 0 0 0 0 0 12 0 1455.6994 P27824 P27824 171 182 CANX Calnexin yes yes 3 0.00089964 125.84 By MS/MS 4.5 0.5 1 1 2 3712200 3712200 0 14121 711 14993 35869;35870 25329 25329 1 109470 0 TPENLITEIR SLGSNPFLTRNQIPRTPENLITEIRSSWRK NQIPRTPENLITEIRSSWRKAIEMEENRTK R T P I R S 0 1 1 0 0 0 2 0 0 2 1 0 0 0 1 0 2 0 0 0 0 0 10 0 1184.6401 Q7Z4H7 Q7Z4H7 584 593 HAUS6 HAUS augmin-like complex subunit 6 yes yes 2 3.3091E-07 191.4 By MS/MS 4 0 1 1 1874900 1874900 0 14122 1793 14994 35871 25330 25330 1 51182 0 TPEQCPSVVSLLSESYNPHVR VRRAAVESLGFILFRTPEQCPSVVSLLSES SVVSLLSESYNPHVRYGAAMALGICCAGTG R T P V R Y 0 1 1 0 1 1 2 0 1 0 2 0 0 0 3 4 1 0 1 3 0 0 21 0 2398.1587 Q99460 Q99460 629 649 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 6.745E-06 130.73 By MS/MS 4 0 1 1 1216300 1216300 0 14123 2268 14995 35872 25331 25331 1 33204 0 TPEVDDEALEKFDK SAEPEQSLACQCLVRTPEVDDEALEKFDKA RTPEVDDEALEKFDKALKALPMHIRLSFNP R T P D K A 1 0 0 3 0 0 3 0 0 0 1 2 0 1 1 0 1 0 0 1 0 0 14 1 1634.7675 CON__P02754 CON__P02754 125 138 yes yes 2;3 2.4625E-34 294.49 By MS/MS 5.75 0.829 2 1 1 4 8246700 8246700 0 + 14124 41 14996 35873;35874;35875;35876 25332;25333 25333 2 307350 0 TPFGAYGGLLK ______________________________ AAKRTPFGAYGGLLKDFTATDLSEFAAKAA R T P L K D 1 0 0 0 0 0 0 3 0 0 2 1 0 1 1 0 1 0 1 0 0 0 11 0 1122.6073 P42765 P42765 15 25 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 2 9.1238E-05 163.15 By MS/MS 7 0 1 1 1101500 1101500 0 14125 855 14997 35877 25334 25334 1 19684 0 TPFLLSGTSYK AKPNIRNVVVVDGVRTPFLLSGTSYKDLMP DGVRTPFLLSGTSYKDLMPHDLARAALTGL R T P Y K D 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 2 0 1 0 0 0 11 0 1212.639 P55084 P55084 62 72 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 2 0.00013108 157.75 By MS/MS 7 0.816 1 1 1 3 22498000 22498000 0 14126 1027 14998 35878;35879;35880 25335;25336 25335 2 269500 0 TPGKEAVAMESYAK SEMLMAHAVTQLANRTPGKEAVAMESYAKA RTPGKEAVAMESYAKALRMLPTIIADNAGY R T P A K A 3 0 0 0 0 0 2 1 0 0 0 2 1 0 1 1 1 0 1 1 0 0 14 1 1480.7232 P78371 P78371 428 441 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.00097854 143.94 By MS/MS By matching 6.5 0.764 4 1 1 5 1 36835000 36812000 22692 14127 1195 14999;15000 35881;35882;35883;35884;35885;35886 25337;25338;25339 25338 944 3 297000 69593 TPGPGAQSALR ALHIKLRATGGNRTKTPGPGAQSALRALAR NRTKTPGPGAQSALRALARSGMKIGRIEDV K T P L R A 2 1 0 0 0 1 0 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1053.5567 P62263 P62263 107 117 RPS14 40S ribosomal protein S14 yes yes 2 8.1235E-05 164.66 By MS/MS By MS/MS 10 0 2 1 1 20685000 20340000 344240 14128 1122 15001 35887;35888 25340;25341 25341 2 21620000 8829600 TPGQINLAQLR VVVGQVPPGTNHISKTPGQINLAQLRLQHM HISKTPGQINLAQLRLQHMQQQVYAQKHQQ K T P L R L 1 1 1 0 0 2 0 1 0 1 2 0 0 0 1 0 1 0 0 0 0 0 11 0 1209.683 Q9UPN9 Q9UPN9 505 515 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.00074626 137.05 By MS/MS 3.5 0.5 1 1 2 1067100 1067100 0 14129 2852 15002 35889;35890 25342 25342 1 28062 0 TPGSPGNLQVR QRLWSTYLRPLLVVRTPGSPGNLQVRKFLE LVVRTPGSPGNLQVRKFLEATLRSLTAGWH R T P V R K 0 1 1 0 0 1 0 2 0 0 1 0 0 0 2 1 1 0 0 1 0 0 11 0 1124.5938 Q9NXS2 Q9NXS2 106 116 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes yes 2 0.027326 82.749 By MS/MS 7 0 1 1 6782600 6782600 0 14130 2692 15003 35891 25343 25343 1 121210 0 TPGTGGSPQGSFADGQPAER LRASLQDLKTVVIAKTPGTGGSPQGSFADG GSPQGSFADGQPAERRASNDQRPQEVPAEA K T P E R R 2 1 0 1 0 2 1 5 0 0 0 0 0 1 3 2 2 0 0 0 0 0 20 0 1915.866 Q9Y2I1 Q9Y2I1 1016 1035 NISCH Nischarin yes yes 2 0.001333 98.676 By MS/MS 1.5 0.5 1 1 2 170030 170030 0 14131 2888 15004 35892;35893 25344 25344 1 8400.2 0 TPGTGSLAAAVETASGR ATDRDPWHPLSDGSRTPGTGSLAAAVETAS GTGSLAAAVETASGRQALVVGKPSPYMFEC R T P G R Q 4 1 0 0 0 0 1 3 0 0 1 0 0 0 1 2 3 0 0 1 0 0 17 0 1544.7794 Q96GD0 Q96GD0 190 206 PDXP Pyridoxal phosphate phosphatase yes yes 2 2.0626E-43 260.5 By MS/MS 8 0 1 1 925540 925540 0 14132 2181 15005 35894 25345 25345 1 61057 0 TPIAAGHPSMNLLLR ESMDKNKMGLKGPLKTPIAAGHPSMNLLLR TPIAAGHPSMNLLLRKTFDLYANVRPCVSI K T P L R K 2 1 1 0 0 0 0 1 1 1 3 0 1 0 2 1 1 0 0 0 0 0 15 0 1589.8712 P50213 P50213 101 115 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 3 0.031664 67.019 By MS/MS 7.5 0.5 1 1 2 3293600 3293600 0 14133 943 15006 35895;35896 25346 25346 698 1 91444 0 TPIGSFLGSLSLLPATK SKPTLKEVVIVSATRTPIGSFLGSLSLLPA IGSFLGSLSLLPATKLGSIAIQGAIEKAGI R T P T K L 1 0 0 0 0 0 0 2 0 1 4 1 0 1 2 3 2 0 0 0 0 0 17 0 1700.9713 P24752 P24752 50 66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2 5.4014E-07 152 By MS/MS 6 0 1 1 290950 290950 0 14134 680 15007 35897 25347 25347 1 2268.8 0 TPIVGQPSIPGGPVR ASVESSSGEAFHVGKTPIVGQPSIPGGPVR TPIVGQPSIPGGPVRLCPGRIRYFKI____ K T P V R L 0 1 0 0 0 1 0 3 0 2 0 0 0 0 4 1 1 0 0 2 0 0 15 0 1473.8304 CON__P12763 CON__P12763 334 348 yes yes 2 4.0986E-08 175.48 By MS/MS By MS/MS 7.29 1.67 1 2 1 1 1 1 6 1 20922000 20852000 70812 + 14135 48 15008 35898;35899;35900;35901;35902;35903;35904 25348;25349;25350;25351;25352 25350 5 643570 217170 TPKEDLCSK DLIDEAYGLDFYILKTPKEDLCSKFGMDLK DFYILKTPKEDLCSKFGMDLKRGMLLRLAR K T P S K F 0 0 0 1 1 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 9 1 1076.5172 Q13084 Q13084 148 156 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.020405 121.6 By MS/MS 8 0 1 1 598560 598560 0 14136 1331 15009 35905 25353 25353 1 39487 0 TPLAVELEVLDGHDPDPGR EPEKPLVRLVKRDVRTPLAVELEVLDGHDP VELEVLDGHDPDPGRLLCRVRHERYFLPPG R T P G R L 1 1 0 3 0 0 2 2 1 0 3 0 0 0 3 0 1 0 0 2 0 0 19 0 2029.0116 Q86TX2;P49753 Q86TX2 100 118 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 3 0.052801 53.519 By MS/MS 7 0 1 1 254030 254030 0 14137 1817 15010 35906 25354 25354 1 4539.7 0 TPLCNLLVK MPEIWDVEDPANAGKTPLCNLLVKDSKPHF PANAGKTPLCNLLVKDSKPHFTTVFQNSVY K T P V K D 0 0 1 0 1 0 0 0 0 0 3 1 0 0 1 0 1 0 0 1 0 0 9 0 1056.6002 Q2PZI1 Q2PZI1 644 652 DPY19L1 Probable C-mannosyltransferase DPY19L1 yes yes 2 0.010344 104.06 By MS/MS 1 0 1 1 203920 203920 0 14138 1561 15011 35907 25355 25355 1 9963 0 TPLDLAAFK VQSLLDLDVRNSSGRTPLDLAAFKGHVECV RNSSGRTPLDLAAFKGHVECVDVLINQGAS R T P F K G 2 0 0 1 0 0 0 0 0 0 2 1 0 1 1 0 1 0 0 0 0 0 9 0 974.54368 O15084 O15084 585 593 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.0068242 111.74 By MS/MS 4 0 1 1 495940 495940 0 14139 147 15012 35908 25356 25356 1 13539 0 TPLDLACEFGR LQHQSNPCLVNKAKKTPLDLACEFGRLKVA KAKKTPLDLACEFGRLKVAQLLLNSHLCVA K T P G R L 1 1 0 1 1 0 1 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 11 0 1277.6074 Q8WXE0;Q8WXD9 Q8WXE0 150 160 CASKIN2;CASKIN1 Caskin-2;Caskin-1 yes no 2 0.0066513 101.38 By MS/MS 3 0 1 1 227070 227070 0 14140 2045 15013 35909 25357 25357 1 5927.7 0 TPLEELCLQIK RASLLDDYQLPEILRTPLEELCLQIKILRL EILRTPLEELCLQIKILRLGGIAYFLSRLM R T P I K I 0 0 0 0 1 1 2 0 0 1 3 1 0 0 1 0 1 0 0 0 0 0 11 0 1342.7166 Q9H2U1 Q9H2U1 634 644 DHX36 ATP-dependent RNA helicase DHX36 yes yes 2 0.0026238 117.71 By MS/MS 4 0 1 1 255550 255550 0 14141 2482 15014 35910 25358 25358 1 6976.3 0 TPLENLVLQAK RLEKMVPFQVPEILRTPLENLVLQAKIHMP EILRTPLENLVLQAKIHMPEKTAVEFLSKA R T P A K I 1 0 1 0 0 1 1 0 0 0 3 1 0 0 1 0 1 0 0 1 0 0 11 0 1224.7078 Q7L2E3 Q7L2E3 814 824 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 4.3626E-16 221.68 By MS/MS By matching 3 1.29 1 1 2 1 1 5 1 18602000 18551000 51120 14142 1763 15015 35911;35912;35913;35914;35915;35916 25359;25360;25361;25362;25363;25364 25363 6 492360 73266 TPLFDQIIDMLR CNALETLLIHRDLLRTPLFDQIIDMLRVEQ LLRTPLFDQIIDMLRVEQVKIHAGPKFASY R T P L R V 0 1 0 2 0 1 0 0 0 2 2 0 1 1 1 0 1 0 0 0 0 0 12 0 1460.7697 P54886 P54886 627 638 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.00023144 146.16 By MS/MS 6 0 1 1 415040 415040 0 14143 1019 15016 35917 25365 25365 793 1 3236.5 0 TPLHEIALSIK RFERLETHMTPEMFRTPLHEIALSIKLLRL EMFRTPLHEIALSIKLLRLGGIGQFLAKAI R T P I K L 1 0 0 0 0 0 1 0 1 2 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1220.7129 Q08211 Q08211 796 806 DHX9 ATP-dependent RNA helicase A yes yes 2 0.034971 80.706 By MS/MS 3.5 0.5 1 1 2 584350 584350 0 14144 1287 15017 35918;35919 25366 25366 1 15335 0 TPLLLMLGQEDR EMLDKSPIRYIPQVKTPLLLMLGQEDRRVP QVKTPLLLMLGQEDRRVPFKQGMEYYRALK K T P D R R 0 1 0 1 0 1 1 1 0 0 4 0 1 0 1 0 1 0 0 0 0 0 12 0 1384.7384 P13798 P13798 665 676 APEH Acylamino-acid-releasing enzyme yes yes 2 0.0020419 142.1 By MS/MS 5 0 1 1 173010 173010 0 14145 581 15018 35920 25367 25367 1 7111.6 0 TPLQQSTLGK VITGPQIRPGMTVIRTPLQQSTLGKAIIRT MTVIRTPLQQSTLGKAIIRTPVMVQPGAPQ R T P G K A 0 0 0 0 0 2 0 1 0 0 2 1 0 0 1 1 2 0 0 0 0 0 10 0 1071.5924 Q12830 Q12830 2192 2201 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 2 0.030345 85.161 By MS/MS 8 0 1 1 856000 856000 0 14146 1309 15019 35921 25368 25368 1 56470 0 TPLQVAK VSQGASIYIENKEEKTPLQVAKGGLGLILK YIENKEEKTPLQVAKGGLGLILKRMVEG__ K T P A K G 1 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 7 0 755.45414 O75832 O75832 207 213 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 2 0.010498 152.63 By MS/MS 8.5 0.5 1 1 2 3143800 3143800 0 14147 332 15020 35922;35923 25369 25369 1 1650200 0 TPLRPLDPTR GLPHISDVVLDKANKTPLRPLDPTRLQGIN DKANKTPLRPLDPTRLQGINCGPDFTPSFA K T P T R L 0 2 0 1 0 0 0 0 0 0 2 0 0 0 3 0 2 0 0 0 0 0 10 1 1164.6615 Q04637 Q04637 647 656 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 3 0.0023404 107.03 By MS/MS 2.5 1.12 1 1 1 1 4 16151000 16151000 0 14148 1264 15021 35924;35925;35926;35927 25370;25371;25372 25372 3 672380 0 TPNEEIDR KNSLPDALLPNLLDRTPNEEIDRQNDDQRK LPNLLDRTPNEEIDRQNDDQRKSNRHKELF R T P D R Q 0 1 1 1 0 0 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 8 0 972.45124 Q96N67 Q96N67 214 221 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0023445 143.37 By MS/MS 2 0 1 1 1064900 1064900 0 14149 2230 15022 35928 25373 25373 1 52932 0 TPNEEIDRQNDDQR KNSLPDALLPNLLDRTPNEEIDRQNDDQRK RTPNEEIDRQNDDQRKSNRHKELFALHPSP R T P Q R K 0 2 2 3 0 2 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 14 1 1728.7663 Q96N67 Q96N67 214 227 DOCK7 Dedicator of cytokinesis protein 7 yes yes 3 0.0039091 96.866 By MS/MS By matching 2 0 2 1 1 696690 685490 11207 14150 2230 15023 35929;35930 25374 25374 1 34072 9434.8 TPNGVVLAPVQLGK ELLLKTFDHYCEYRRTPNGVVLAPVQLGKW RTPNGVVLAPVQLGKWLVLFCDEINLPDMD R T P G K W 1 0 1 0 0 1 0 2 0 0 2 1 0 0 2 0 1 0 0 3 0 0 14 0 1391.8136 Q14204 Q14204 2644 2657 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00053561 167.11 By MS/MS 1.5 0.5 1 1 2 2279500 2279500 0 14151 1421 15024 35931;35932 25375;25376 25375 2 111720 0 TPNTFAVCTEHR TAQVEYSEDQQAMLKTPNTFAVCTEHRGIL MLKTPNTFAVCTEHRGILLQAASDKDMHDW K T P H R G 1 1 1 0 1 0 1 0 1 0 0 0 0 1 1 0 3 0 0 1 0 0 12 0 1431.6565 Q12756 Q12756 1638 1649 KIF1A Kinesin-like protein KIF1A yes yes 3 0.039907 75.739 By MS/MS 1.5 0.5 1 1 2 240910 240910 0 14152 1302 15025 35933;35934 25377 25377 0 11917 0 TPPAPSPFDLPELK ILKEMCDVEQVLSKKTPPAPSPFDLPELKH KTPPAPSPFDLPELKHVATEYQENKAPGKK K T P L K H 1 0 0 1 0 0 1 0 0 0 2 1 0 1 5 1 1 0 0 0 0 0 14 0 1507.7922 O95239 O95239 1181 1194 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.013252 89.561 By MS/MS 3 0 1 1 203230 203230 0 14153 378 15026 35935 25378 25378 1 5305.4 0 TPPPVLIFAEK KEEAKMVYLLECLQKTPPPVLIFAEKKADV CLQKTPPPVLIFAEKKADVDAIHEYLLLKG K T P E K K 1 0 0 0 0 0 1 0 0 1 1 1 0 1 3 0 1 0 0 1 0 0 11 0 1210.6962 Q9UJV9 Q9UJV9 431 441 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 2 0.041632 78.939 By MS/MS 5 0 1 1 505860 505860 0 14154 2800 15027 35936 25379 25379 1 20793 0 TPQAPASANLVGPR SGTPPTAANYPSSSRTPQAPASANLVGPRS RTPQAPASANLVGPRSAHATAPVNIAGSRT R T P P R S 3 1 1 0 0 1 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1377.7365 Q9UQ35 Q9UQ35 2329 2342 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0055307 112.64 By MS/MS 1 0 1 1 357450 357450 0 14155 2858 15028 35937 25380 25380 1 17464 0 TPQSPAPCVLLR ARQLWDSPETAPAARTPQSPAPCVLLRAQR AARTPQSPAPCVLLRAQRSLAPEPKEPLIP R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.003142 111.5 By MS/MS 3.5 0.5 1 1 2 1089600 1089600 0 14156 2993 15029 35938;35939 25381 25381 1 28608 0 TPSAETPSEPVDWTFAQR FRFNHPEQARAEREKTPSAETPSEPVDWTF AETPSEPVDWTFAQRELLEKQGIDMKQEME K T P Q R E 2 1 0 1 0 1 2 0 0 0 0 0 0 1 3 2 3 1 0 1 0 0 18 0 2017.9381 O60333 O60333 647 664 KIF1B Kinesin-like protein KIF1B yes yes 2 2.3879E-07 153.49 By MS/MS 3 0 1 1 432940 432940 0 14157 245 15030 35940 25382 25382 1 11302 0 TPSGNLVNR LLHSILRSPMSFFERTPSGNLVNRFSKELD MSFFERTPSGNLVNRFSKELDTVDSMIPEV R T P N R F 0 1 2 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 9 0 956.50394 P33527 P33527 1067 1075 ABCC1 Multidrug resistance-associated protein 1 yes yes 2 0.00029272 158.07 By MS/MS 2 0.816 1 1 1 3 708770 708770 0 14158 769 15031 35941;35942;35943 25383;25384 25384 2 29463 0 TPSQIIR SQSQKFSSEHKNLSRTPSQIIRKPDRERVE SEHKNLSRTPSQIIRKPDRERVEDFDHTSR R T P I R K 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 7 0 813.47085 Q01804 Q01804 414 420 OTUD4 OTU domain-containing protein 4 yes yes 2 0.023134 120.49 By MS/MS 3 0 1 1 0 0 0 14159 1245 15032 35944 25385 25385 1 0 0 TPSQLSDNNCRQ ASQRFEGTTSLGEVRTPSQLSDNNCRQ___ EVRTPSQLSDNNCRQ_______________ R T P R Q - 0 1 2 1 1 2 0 0 0 0 1 0 0 0 1 2 1 0 0 0 0 0 12 1 1418.6208 Q4G0F5 Q4G0F5 325 336 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 2 0.00099767 149.94 By MS/MS 7 0 1 1 571670 571670 0 14160 1575 15033 35945 25386 25386 1 10216 0 TPSSDVLVFDYTK RARYMPQNPCIIATKTPSSDVLVFDYTKHP TKTPSSDVLVFDYTKHPSKPDPSGECNPDL K T P T K H 0 0 0 2 0 0 0 0 0 0 1 1 0 1 1 2 2 0 1 2 0 0 13 0 1470.7242 Q09028;Q16576 Q09028 144 156 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 1.778E-26 251.24 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 12741000 12704000 36727 14161 1296;1541 15034 35946;35947;35948;35949;35950 25387;25388 25387 2 222090 112640 TPSVSAPLALSCPR NLENGAPAVGPVQPRTPSVSAPLALSCPRQ RTPSVSAPLALSCPRQGGLPRSNSGLGGEV R T P P R Q 2 1 0 0 1 0 0 0 0 0 2 0 0 0 3 3 1 0 0 1 0 0 14 0 1454.7551 Q9UGP4 Q9UGP4 294 307 LIMD1 LIM domain-containing protein 1 yes yes 2 6.3997E-05 152.67 By MS/MS 5 0 1 1 1430300 1430300 0 14162 2774 15035 35951 25389 25389 1 58791 0 TPTAPAVNLAGAR RTAVAPSAVNLADPRTPTAPAVNLAGARTP PRTPTAPAVNLAGARTPAALAALSLTGSGT R T P A R T 4 1 1 0 0 0 0 1 0 0 1 0 0 0 2 0 2 0 0 1 0 0 13 0 1237.6779 Q9UQ35 Q9UQ35 2289 2301 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.053274 70.977 By MS/MS 1 0 1 1 303510 303510 0 14163 2858 15036 35952 25390 25390 1 14829 0 TPTEALASFDYIVR ADDWLVHLISPNVYRTPTEALASFDYIVRE RTPTEALASFDYIVREGKFGAVEGAVAKYM R T P V R E 2 1 0 1 0 0 1 0 0 1 1 0 0 1 1 1 2 0 1 1 0 0 14 0 1581.8039 Q9H7Z7 Q9H7Z7 253 266 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 2 0.00011027 167.18 By MS/MS 8 0 1 1 333910 333910 0 14164 2519 15037 35953 25391 25391 1 22028 0 TPTEAPADCR ______________________________ TKLKKTPTEAPADCRALIDKLKVCNDEQLL K T P C R A 2 1 0 1 1 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 10 0 1116.487 Q7Z6Z7 Q7Z6Z7 11 20 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0025399 115.49 By MS/MS 2 0.816 1 1 1 3 593840 593840 0 14165 1803 15038 35954;35955;35956 25392;25393 25392 2 28112 0 TPTGDEFVK GTAQKLGLTEDQFIRTPTGDEFVKTSVRKG EDQFIRTPTGDEFVKTSVRKGLLPQILENL R T P V K T 0 0 0 1 0 0 1 1 0 0 0 1 0 1 1 0 2 0 0 1 0 0 9 0 992.48148 P28340 P28340 640 648 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.015751 99.136 By MS/MS 3.5 0.5 1 1 2 1109800 1109800 0 14166 719 15039 35957;35958 25394 25394 1 29239 0 TPTLFSTK FIRAEYAHRGFSEVKTPTLFSTKLWEQSGH RGFSEVKTPTLFSTKLWEQSGHWEHYQEDM K T P T K L 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 3 0 0 0 0 0 8 0 893.48583 Q9BW92 Q9BW92 353 360 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 0.005704 134.48 By MS/MS 6.5 0.5 1 1 2 3082400 3082400 0 14167 2391 15040 35959;35960 25395 25395 1 28206 0 TPTQLEGATR CASCWIYWKKYGGLKTPTQLEGATRGTTEP YGGLKTPTQLEGATRGTTEPHSRGHLSRPE K T P T R G 1 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 3 0 0 0 0 0 10 0 1072.5513 O94776 O94776 406 415 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.047784 79.489 By MS/MS By matching 5.33 0.471 2 1 2 1 3729000 3694600 34413 14168 349 15041 35961;35962;35963 25396 25396 1 129980 101830 TPTTNAVHK TLSAAYTKDLLLPIKTPTTNAVHKCRVHGL LLLPIKTPTTNAVHKCRVHGLEIEGRDCGE K T P H K C 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 3 0 0 1 0 0 9 0 967.50869 Q5VT66 Q5VT66 140 148 MARC1 Mitochondrial amidoxime-reducing component 1 yes yes 2 0.03521 98.582 By MS/MS 8 0 1 1 0 0 0 14169 1648 15042 35964 25397 25397 1 0 0 TPVEEVPAAIAPFQGR YKLVNNGEKLEFLHKTPVEEVPAAIAPFQG PVEEVPAAIAPFQGRVLIGVGKLLRVYDLG K T P G R V 3 1 0 0 0 1 2 1 0 1 0 0 0 1 3 0 1 0 0 2 0 0 16 0 1680.8835 Q15393 Q15393 943 958 SF3B3 Splicing factor 3B subunit 3 yes yes 2 4.9908E-06 188.28 By MS/MS 4.33 1.97 1 1 1 1 1 1 6 3123900 3123900 0 14170 1498 15043 35965;35966;35967;35968;35969;35970 25398;25399;25400 25398 3 89602 0 TPVEPEVAIHR ______________________________ DTGKTPVEPEVAIHRIRITLTSRNVKSLEK K T P H R I 1 1 0 0 0 0 2 0 1 1 0 0 0 0 2 0 1 0 0 2 0 0 11 0 1246.667 P60866 P60866 9 19 RPS20 40S ribosomal protein S20 yes yes 2;3 0.00026769 143.24 By MS/MS By MS/MS 10 0 4 2 2 9280900 8734000 546860 14171 1075 15044 35971;35972;35973;35974 25401;25402;25403 25402 3 9283300 14027000 TPVIDADKPVSSQLR IHYGVKSNSLAFIKRTPVIDADKPVSSQLR TPVIDADKPVSSQLRVLTLSEDSPYETLHS R T P L R V 1 1 0 2 0 1 0 0 0 1 1 1 0 0 2 2 1 0 0 2 0 0 15 1 1624.8784 Q14204 Q14204 122 136 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 1.1317E-06 189.24 By MS/MS By matching 2.38 1.41 3 2 1 1 1 7 1 8045600 7949600 96010 14172 1421 15045 35975;35976;35977;35978;35979;35980;35981;35982 25404;25405;25406 25405 3 364170 96010 TPVLVGSDEFDK LPTIKWKPLIHSPSRTPVLVGSDEFDKCLS PSRTPVLVGSDEFDKCLSNDKFSHEEYSNG R T P D K C 0 0 0 2 0 0 1 1 0 0 1 1 0 1 1 1 1 0 0 2 0 0 12 0 1305.6452 Q9NZJ5 Q9NZJ5 441 452 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes yes 2 0.014903 91.549 By MS/MS 3 0 1 1 684370 684370 0 14173 2712 15046 35983 25407 25407 1 17866 0 TPVPSDIDISR KPGKWMIQYNNLNLKTPVPSDIDISRSCKP LNLKTPVPSDIDISRSCKPKPIGKLAREIG K T P S R S 0 1 0 2 0 0 0 0 0 2 0 0 0 0 2 2 1 0 0 1 0 0 11 0 1198.6194 P11586 P11586 314 324 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.022741 86.882 By MS/MS By matching 4.33 0.471 2 1 2 1 24318000 24173000 144860 14174 556 15047 35984;35985;35986 25408 25408 1 676070 302690 TPVQPNPIVYMMK PDSWDKDVYPEPPRRTPVQPNPIVYMMKAF RRTPVQPNPIVYMMKAFDLIVDRPVTLVRE R T P M K A 0 0 1 0 0 1 0 0 0 1 0 1 2 0 3 0 1 0 1 2 0 0 13 0 1516.7782 O96000 O96000 17 29 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 0.00043054 121.6 By MS/MS 9 0 1 1 561600 561600 0 14175 417 15048 35987 25409 25409 221;222 1 322310 0 TPVSITEHPK VLGISSREGEEVMFKTPVSITEHPKINEWL EVMFKTPVSITEHPKINEWLTLVEKEMRVT K T P P K I 0 0 0 0 0 0 1 0 1 1 0 1 0 0 2 1 2 0 0 1 0 0 10 0 1107.5924 Q14204 Q14204 1688 1697 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00022877 155.58 By MS/MS 1.5 0.5 1 1 2 467350 467350 0 14176 1421 15049 35988;35989 25410 25410 1 22953 0 TPVTQVNEVTGTLR LQKDVEDFLSPLLGKTPVTQVNEVTGTLRI KTPVTQVNEVTGTLRIKGYFDQELKAWLLE K T P L R I 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 0 4 0 0 3 0 0 14 0 1513.81 Q13405 Q13405 135 148 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 2 5.2786E-47 287.29 By MS/MS 10 0 1 1 1869100 1869100 0 14177 1364 15050 35990 25411 25411 1 1986600 0 TPYTDVNIVTIR LYANVRPCVSIEGYKTPYTDVNIVTIRENT GYKTPYTDVNIVTIRENTEGEYSGIEHVIV K T P I R E 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 0 3 0 1 2 0 0 12 0 1390.7456 P50213 P50213 135 146 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 2 2.2336E-11 209.8 By MS/MS 7 0.816 1 1 1 3 28557000 28557000 0 14178 943 15051 35991;35992;35993 25412;25413 25412 2 793150 0 TQADLDSLVR QALHATGARVVAVSRTQADLDSLVRECPGI VAVSRTQADLDSLVRECPGIEPVCVDLGDW R T Q V R E 1 1 0 2 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1116.5775 Q7Z4W1 Q7Z4W1 40 49 DCXR L-xylulose reductase yes yes 2 0.00016779 157.97 By MS/MS By matching 5.67 2.56 1 1 1 1 1 1 2 4 3729200 1063900 2665300 14179 1798 15052 35994;35995;35996;35997;35998;35999 25414 25414 1 424430 2476600 TQARPVGVK ALKTEERKAKPAPSKTQARPVGVKIPTCKI KPAPSKTQARPVGVKIPTCKITLKETFLTS K T Q V K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 2 0 0 9 1 954.56106 O95433 O95433 195 203 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 3 0.024195 76.221 By MS/MS 7 0 1 1 0 0 0 14180 393 15053 36000 25415 25415 1 0 0 TQCALAASK ERMKCFSEENHEPLRTQCALAASKLLKKPD NHEPLRTQCALAASKLLKKPDQGRAVSTCA R T Q S K L 3 0 0 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 9 0 948.46987 Q96QK1 Q96QK1 651 659 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00020357 163.88 By MS/MS 5.5 0.5 1 1 2 2212800 2212800 0 14181 2242 15054 36001;36002 25416 25416 1 70758 0 TQDASGPELILPASIEFR IRVEQQPDYRRQESRTQDASGPELILPASI ASGPELILPASIEFRESSEDSFLSAIINYT R T Q F R E 2 1 0 1 0 1 2 1 0 2 2 0 0 1 2 2 1 0 0 0 0 0 18 0 1943 P55196 P55196 591 608 MLLT4 Afadin yes yes 2 0.0069082 91.207 By MS/MS 3 0.816 1 1 1 3 271780 271780 0 14182 1029 15055 36003;36004;36005 25417;25418;25419;25420 25417 4 10861 0 TQDGETALQLAIR SALFLLEHQADINVRTQDGETALQLAIRNQ VRTQDGETALQLAIRNQLPLVVDAICTRGA R T Q I R N 2 1 0 1 0 2 1 1 0 1 2 0 0 0 0 0 2 0 0 0 0 0 13 0 1414.7416 Q9P2R3 Q9P2R3 652 664 ANKFY1 Rabankyrin-5 yes yes 2 1.5631E-25 245.13 By MS/MS 4 0 1 1 1854300 1854300 0 14183 2740 15056 36006 25421 25421 1 50621 0 TQDPSSPGTTPPQAR SSPGPRPVEGTPASRTQDPSSPGTTPPQAR TQDPSSPGTTPPQARQAPAPTVIRDPPSIT R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0.010039 93.766 By MS/MS 5 0 1 1 702410 702410 0 14184 1334 15057 36007 25422 25422 1 28872 0 TQEGSLSAR MFVETQASQGTLQTRTQEGSLSARWPVAGQ GTLQTRTQEGSLSARWPVAGQIRATQQQHD R T Q A R W 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 9 0 947.46722 P78527 P78527 2620 2628 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.5312E-06 188.87 By MS/MS 2 0.816 1 1 1 3 8806700 8806700 0 14185 1197 15058 36008;36009;36010 25423;25424;25425 25423 3 419050 0 TQELLER NTAIRKLQMGQAAKKTQELLERHSKGPLIV QMGQAAKKTQELLERHSKGPLIVDTVSAES K T Q E R H 0 1 0 0 0 1 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 887.47125 Q5JTZ9 Q5JTZ9 871 877 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.021924 121.09 By MS/MS 4 0 1 1 3456000 3456000 0 14186 1611 15059 36011 25426 25426 1 94345 0 TQETQEIR TPLKIEIDPQFQVVRTQETQEIRTLNNQFA PQFQVVRTQETQEIRTLNNQFASFIDKVRF R T Q I R T 0 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 8 0 1003.4934 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 109 116 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.030469 109.48 By MS/MS 6.5 1.12 1 1 1 1 4 256410 0 256410 + 14187 62 15060 36012;36013;36014;36015 25427 25427 1 0 948900 TQGELFLLLDSR PVPLEHYLFTGNSSKTQGELFLLLDSRGAF SSKTQGELFLLLDSRGAFHTKGYYAAVEAK K T Q S R G 0 1 0 1 0 1 1 1 0 0 4 0 0 1 0 1 1 0 0 0 0 0 12 0 1390.7456 Q15477 Q15477 499 510 SKIV2L Helicase SKI2W yes yes 2 0.0002964 148.13 By MS/MS 3 0 1 1 146150 146150 0 14188 1506 15061 36016 25428;25429 25428 2 3815.3 0 TQGFLALFSGDTGEIK VHTVSLHEIDVINSRTQGFLALFSGDTGEI QGFLALFSGDTGEIKSEVREQINAKVAEWR R T Q I K S 1 0 0 1 0 1 1 3 0 1 2 1 0 2 0 1 2 0 0 0 0 0 16 0 1682.8516 Q9Y230 Q9Y230 254 269 RUVBL2 RuvB-like 2 yes yes 2 8.2784E-21 219.95 By MS/MS 6 0 1 1 22433000 22433000 0 14189 2864 15062 36017 25430 25430 1 174930 0 TQGFLALFSGDTGEIKSEVR VHTVSLHEIDVINSRTQGFLALFSGDTGEI ALFSGDTGEIKSEVREQINAKVAEWREEGK R T Q V R E 1 1 0 1 0 1 2 3 0 1 2 1 0 2 0 2 2 0 0 1 0 0 20 1 2154.0957 Q9Y230 Q9Y230 254 273 RUVBL2 RuvB-like 2 yes yes 2;3 0.00021231 149.99 By MS/MS 6 0 2 2 14472000 14472000 0 14190 2864 15063 36018;36019 25431;25432 25432 2 112850 0 TQGLLSEILR ASVSQAVFARVAFNRTQGLLSEILRKEEDP VAFNRTQGLLSEILRKEEDPRTASQSLLVN R T Q L R K 0 1 0 0 0 1 1 1 0 1 3 0 0 0 0 1 1 0 0 0 0 0 10 0 1128.6503 Q9UPW6;Q01826 Q9UPW6 390 399 SATB2;SATB1 DNA-binding protein SATB2;DNA-binding protein SATB1 yes no 2 0.0027797 123.11 By MS/MS 4 0 1 1 318210 318210 0 14191 1247 15064 36020 25433 25433 1 8686.7 0 TQGNVFATDAILATLMSCTR TVTTTDDPVIRKLAKTQGNVFATDAILATL FATDAILATLMSCTRSVYSWDIVVQRVGSK K T Q T R S 3 1 1 1 1 1 0 1 0 1 2 0 1 1 0 1 4 0 0 1 0 0 20 0 2169.0558 O15371 O15371 241 260 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 9.3469E-26 223.14 By MS/MS 6 0 3 3 2558800 2558800 0 14192 172 15065;15066 36021;36022;36023 25434;25435;25436 25434 103 3 19954 0 TQHGGSHVSR LLAEGVILRRVGEARTQHGGSHVSRKSEHL VGEARTQHGGSHVSRKSEHLSVRPQTALEE R T Q S R K 0 1 0 0 0 1 0 2 2 0 0 0 0 0 0 2 1 0 0 1 0 0 10 0 1064.5112 Q9Y3D9 Q9Y3D9 140 149 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 2;3 0.00023008 155.53 By MS/MS By matching 9.2 0.4 4 1 3 2 4179900 4153800 26155 14193 2935 15067 36024;36025;36026;36027;36028 25437;25438 25437 2 2388500 281870 TQHHVEALVEHQNGK VFPSREFWHRLRVIRTQHHVEALVEHQNGK TQHHVEALVEHQNGKVVVSASTREWAIKKH R T Q G K V 1 0 1 0 0 2 2 1 3 0 1 1 0 0 0 0 1 0 0 2 0 0 15 0 1725.8547 Q9H0U6 Q9H0U6 86 100 MRPL18 39S ribosomal protein L18, mitochondrial yes yes 3 0.023987 69.379 By MS/MS 9 0 1 1 99828 99828 0 14194 2460 15068 36029 25439 25439 1 57292 0 TQIALEPEQILR AKHESREDKIFQKFKTQIALEPEQILRYGR KFKTQIALEPEQILRYGRGIAPIWISGENI K T Q L R Y 1 1 0 0 0 2 2 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1409.7878 Q16342 Q16342 246 257 PDCD2 Programmed cell death protein 2 yes yes 2 2.0266E-07 189.58 By MS/MS 7 0 1 1 1484700 1484700 0 14195 1533 15069 36030 25440 25440 1 26532 0 TQIAPGSQTVLGIGPGPADLIDK KMLGLTVSLIQDAGRTQIAPGSQTVLGIGP TVLGIGPGPADLIDKVTGHLKLY_______ R T Q D K V 2 0 0 2 0 2 0 4 0 3 2 1 0 0 3 1 2 0 0 1 0 0 23 0 2247.2111 Q9Y3E5 Q9Y3E5 149 171 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 2 0.00010224 97.214 By MS/MS 9.5 0.5 1 1 2 190650 190650 0 14196 2936 15070 36031;36032 25441;25442;25443 25441 3 134970 0 TQIDGQLFLIK IQSLLGASESISKNKTQIDGQLFLIKHLLI SKNKTQIDGQLFLIKHLLILREQIAPFHTE K T Q I K H 0 0 0 1 0 2 0 1 0 2 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1274.7234 Q96JB2 Q96JB2 604 614 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 2 0.0012419 130.41 By MS/MS 4.5 0.5 1 1 2 270690 270690 0 14197 2205 15071 36033;36034 25444 25444 1 8318.3 0 TQIDHYVGIAR ELLIFSVPIVYEKYKTQIDHYVGIARDQTK EKYKTQIDHYVGIARDQTKSIVEKIQAKLP K T Q A R D 1 1 0 1 0 1 0 1 1 2 0 0 0 0 0 0 1 0 1 1 0 0 11 0 1271.6622 O95197 O95197 999 1009 RTN3 Reticulon-3 yes yes 2;3 0.00040528 155.26 By MS/MS 9 0 2 2 1338000 1338000 0 14198 373 15072 36035;36036 25445;25446 25445 2 767910 0 TQIIQDFLR KLCAMVADNPSYNTKTQIIQDFLRKGSAGD PSYNTKTQIIQDFLRKGSAGDGFHGDVYLT K T Q L R K 0 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 9 0 1132.6241 P49916 P49916 283 291 LIG3 DNA ligase 3 yes yes 2 0.002636 122.96 By MS/MS 3.5 0.5 1 1 2 443400 443400 0 14199 941 15073 36037;36038 25447 25447 1 11993 0 TQIQSVEPYTK GGVTFTWVEKDISGKTQIQSVEPYTKQQLN ISGKTQIQSVEPYTKQQLNNMSFAEIIMGY K T Q T K Q 0 0 0 0 0 2 1 0 0 1 0 1 0 0 1 1 2 0 1 1 0 0 11 0 1292.6612 P40763 P40763 632 642 STAT3 Signal transducer and activator of transcription 3 yes yes 2 0.0032132 115.23 By MS/MS 4.5 0.5 1 1 2 1527900 1527900 0 14200 831 15074 36039;36040 25448 25448 1 56227 0 TQIVTEIISEIR LVERLLHIIIDDNKRTQIVTEIISEIRAPI NKRTQIVTEIISEIRAPIVTVGVNNDPADV R T Q I R A 0 1 0 0 0 1 2 0 0 4 0 0 0 0 0 1 2 0 0 1 0 0 12 0 1400.7875 Q9BPX3 Q9BPX3 459 470 NCAPG Condensin complex subunit 3 yes yes 2 0.00014976 155.02 By MS/MS 3.5 0.5 1 1 2 517250 517250 0 14201 2302 15075 36041;36042 25449 25449 1 14101 0 TQLEELEDELQATEDAK EKSKRALEQQVEEMKTQLEELEDELQATED LEELEDELQATEDAKLRLEVNLQAMKAQFE K T Q A K L 2 0 0 2 0 2 5 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 17 0 1960.9113 P35580;P35579 P35579 1539 1555 MYH10;MYH9 Myosin-10;Myosin-9 no no 2 0.0050152 105.14 By MS/MS 2 0 1 1 88670 88670 0 14202 793;794 15076 36043 25450 25450 1 4407.4 0 TQLIQLSTLLR DQMHQNFEEQMQGMKTQLIQLSTLLRLLDS QGMKTQLIQLSTLLRLLDSGFCSYLESQDS K T Q L R L 0 1 0 0 0 2 0 0 0 1 4 0 0 0 0 1 2 0 0 0 0 0 11 0 1284.7765 Q8TC07 Q8TC07 497 507 TBC1D15 TBC1 domain family member 15 yes yes 2 0.038917 79.659 By MS/MS 5 0 1 1 72837 72837 0 14203 1991 15077 36044 25451 25451 1 2993.9 0 TQLKGSELEITLTR PYPVSPSDKVLIQEKTQLKGSELEITLTRG KTQLKGSELEITLTRGSSLPGPACAYVNLN K T Q T R G 0 1 0 0 0 1 2 1 0 1 3 1 0 0 0 1 3 0 0 0 0 0 14 1 1587.8832 P41252 P41252 1058 1071 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2;3 0.0027204 108.23 By MS/MS 3.33 0.471 2 1 3 1745700 1745700 0 14204 840 15078 36045;36046;36047 25452;25453 25453 2 45700 0 TQLQLDER GGIEICITFPTEYVKTQLQLDERSHPPRYR FPTEYVKTQLQLDERSHPPRYRGIGDCVRQ K T Q E R S 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 1001.5142 P53007 P53007 51 58 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 2 0.015865 112.11 By MS/MS 6.17 3.44 1 1 1 1 1 1 6 71943000 71943000 0 14205 996 15079 36048;36049;36050;36051;36052;36053 25454;25455 25454 2 5175700 0 TQMTSAVR NNAENLFRAFLGELKTQMTSAVREPKLPVL AFLGELKTQMTSAVREPKLPVLAGCLKGLS K T Q V R E 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 2 0 0 1 0 0 8 0 892.44365 P78527 P78527 206 213 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0035746 136.27 By MS/MS 1.5 0.5 2 2 4 996930 996930 0 14206 1197 15080;15081 36054;36055;36056;36057 25456;25457;25458;25459 25456 979 4 49111 0 TQMTSAVREPK NNAENLFRAFLGELKTQMTSAVREPKLPVL GELKTQMTSAVREPKLPVLAGCLKGLSSLL K T Q P K L 1 1 0 0 0 1 1 0 0 0 0 1 1 0 1 1 2 0 0 1 0 0 11 1 1246.634 P78527 P78527 206 216 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.011079 84.817 By MS/MS 1 0 1 1 94919 94919 0 14207 1197 15082 36058 25460 25460 979 1 4637.6 0 TQNPMVTGTSVLGVK FMDPASALYRGPITRTQNPMVTGTSVLGVK TQNPMVTGTSVLGVKFEGGVVIAADMLGSY R T Q V K F 0 0 1 0 0 1 0 2 0 0 1 1 1 0 1 1 3 0 0 3 0 0 15 0 1530.8076 P28070 P28070 46 60 PSMB4 Proteasome subunit beta type-4 yes yes 2 1.4972E-14 204.35 By MS/MS 8.67 0.471 1 2 3 3944000 3944000 0 14208 713 15083;15084 36059;36060;36061 25461;25462 25461 490 2 2056000 0 TQNTSLSR GAGNPKCKIAIVLGRTQNTSLSRHKQHSMI IAIVLGRTQNTSLSRHKQHSMILVPMNTPG R T Q S R H 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 2 2 0 0 0 0 0 8 0 905.45666 Q709F0 Q709F0 556 563 ACAD11 Acyl-CoA dehydrogenase family member 11 yes yes 2 0.0042245 140.83 By MS/MS 5 0 1 1 1052000 1052000 0 14209 1750 15085 36062 25463 25463 1 43243 0 TQNVLGEK RVTPTRTEIIILATRTQNVLGEKGRRIREL IIILATRTQNVLGEKGRRIRELTAVVQKRF R T Q E K G 0 0 1 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 887.47125 P23396 P23396 55 62 RPS3 40S ribosomal protein S3 yes yes 2 0.0067037 130.75 By MS/MS 8.5 1.12 1 1 1 1 4 22978000 22978000 0 14210 668 15086 36063;36064;36065;36066 25464 25464 1 1872800 0 TQQLLER KEKIDIGLPPPKVSRTQQLLERKQAIQELR LPPPKVSRTQQLLERKQAIQELRANVEEER R T Q E R K 0 1 0 0 0 2 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 886.48723 Q96DV4 Q96DV4 100 106 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 0.021526 122.19 By MS/MS By matching 7.33 0.471 2 1 2 1 4757400 4706500 50811 14211 2155 15087 36067;36068;36069 25465 25465 1 91579 208590 TQQQVEAEVTNIKK QQVLRANQYKENHNRTQQQVEAEVTNIKKT RTQQQVEAEVTNIKKTLKATASSSAQEMEQ R T Q K K T 1 0 1 0 0 3 2 0 0 1 0 2 0 0 0 0 2 0 0 2 0 0 14 1 1614.8577 Q9H9Q2 Q9H9Q2 205 218 COPS7B COP9 signalosome complex subunit 7b yes yes 3 0.0070844 92.269 By MS/MS 8 0 1 1 4009400 4009400 0 14212 2537 15088 36070 25466 25466 1 264500 0 TQRPADVIFATVR MSKDSLLGDKGQTARTQRPADVIFATVREL ARTQRPADVIFATVRELVSGGRSVRFSEAE R T Q V R E 2 2 0 1 0 1 0 0 0 1 0 0 0 1 1 0 2 0 0 2 0 0 13 1 1472.81 P33993 P33993 654 666 MCM7 DNA replication licensing factor MCM7 yes yes 2;3 0.0019302 165.35 By MS/MS 5.67 1.49 1 1 2 2 2 1 9 14837000 14837000 0 14213 775 15089 36071;36072;36073;36074;36075;36076;36077;36078;36079 25467;25468 25468 2 408450 0 TQSILFNR IVDGPDPENIILILKTQSILFNRHKEDLQP NIILILKTQSILFNRHKEDLQPYKYAGYPM K T Q N R H 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 8 0 977.52943 O75165 O75165 1375 1382 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0038151 143.89 By MS/MS 2 0 1 1 453620 453620 0 14214 287 15090 36080 25469 25469 1 22547 0 TQSQLAK RTWVSSAAQTEKGGRTQSQLAKSSRPEFDW AQTEKGGRTQSQLAKSSRPEFDWQDPLVLE R T Q A K S 1 0 0 0 0 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 7 0 774.42357 Q92947 Q92947 36 42 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes yes 2 0.023897 119.17 By MS/MS 7 0 1 1 585820 585820 0 14215 2092 15091 36081 25470 25470 1 10469 0 TQSTWVDSFFR GRQDKAVFVPDIYSRTQSTWVDSFFRQNGY IYSRTQSTWVDSFFRQNGYLEFDALSRLGI R T Q F R Q 0 1 0 1 0 1 0 0 0 0 0 0 0 2 0 2 2 1 0 1 0 0 11 0 1372.6412 O94874 O94874 252 262 UFL1 E3 UFM1-protein ligase 1 yes yes 2 8.1312E-05 164.65 By MS/MS 5 0.816 1 1 1 3 1020800 1020800 0 14216 354 15092 36082;36083;36084 25471;25472 25472 2 28719 0 TQTPPLGQTPQLGLK QPQITMIPPSAQPPRTQTPPLGQTPQLGLK TQTPPLGQTPQLGLKTNPPLIQEKPAKTSK R T Q L K T 0 0 0 0 0 3 0 2 0 0 3 1 0 0 3 0 3 0 0 0 0 0 15 0 1577.8777 P78344 P78344 506 520 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 6.7939E-10 176.99 By MS/MS 4.5 0.5 1 1 2 5823100 5823100 0 14217 1192 15093 36085;36086 25473 25473 1 169130 0 TQTPPVEENVTQK MEEQHKCSSKSLEHKTQTPPVEENVTQKIS HKTQTPPVEENVTQKISDLEICADEFPGSS K T Q Q K I 0 0 1 0 0 2 2 0 0 0 0 1 0 0 2 0 3 0 0 2 0 0 13 0 1469.7362 Q6P1Q9 Q6P1Q9 152 164 METTL2B Methyltransferase-like protein 2B yes yes 2 8.1196E-05 168.83 By MS/MS 8 0.816 1 1 1 3 1512900 1512900 0 14218 1704 15094 36087;36088;36089 25474 25474 1 56777 0 TQTSDPAMLPTMIGLLAEAGVR PEVPLRRDLPLLLFRTQTSDPAMLPTMIGL MLPTMIGLLAEAGVRLLSYQTSLVSDGETW R T Q V R L 3 1 0 1 0 1 1 2 0 1 3 0 2 0 2 1 3 0 0 1 0 0 22 0 2271.1603 O43175 O43175 470 491 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 0.00034569 95.067 By MS/MS 6 0 3 3 142850000 142850000 0 14219 185 15095;15096 36090;36091;36092 25475;25476;25477 25475 111 3 1113900 0 TQVAGGQLSFK MASEDIAKLAETLAKTQVAGGQLSFKGKSL TLAKTQVAGGQLSFKGKSLKLNTAEDAKDV K T Q F K G 1 0 0 0 0 2 0 2 0 0 1 1 0 1 0 1 1 0 0 1 0 0 11 0 1134.6033 P46060 P46060 16 26 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.0019759 141.71 By MS/MS By matching 5 0 2 1 1 6993100 6982300 10811 14220 876 15097 36093;36094 25478 25478 1 287000 31991 TQVEASEESALNHLQNPGDAAEGR RSKLWEMDNMLIQIKTQVEASEESALNHLQ ALNHLQNPGDAAEGRAAKRCEKAEEKAKEI K T Q G R A 4 1 2 1 0 2 4 2 1 0 2 0 0 0 1 2 1 0 0 1 0 0 24 0 2522.1633 Q9Y605 Q9Y605 69 92 MRFAP1 MORF4 family-associated protein 1 yes yes 3 0.0012961 75.225 By MS/MS 9.5 0.5 1 1 2 566040 566040 0 14221 2991 15098 36095;36096 25479;25480 25480 2 523860 0 TQVELLEAPTPALKR DNYFLVGPYTEQGVRTQVELLEAPTPALKR TQVELLEAPTPALKRTLDSMNSKGCKVYFG R T Q K R T 2 1 0 0 0 1 2 0 0 0 3 1 0 0 2 0 2 0 0 1 0 0 15 1 1664.9461 P13807 P13807 75 89 GYS1 Glycogen [starch] synthase, muscle yes yes 3 0.00015123 131.86 By MS/MS 5 0.816 1 1 1 3 2259000 2259000 0 14222 583 15099 36097;36098;36099 25481 25481 1 75718 0 TQVVAGTNYYIK KTNETYGKLEAVQYKTQVVAGTNYYIKVRA QYKTQVVAGTNYYIKVRAGDNKYMHLKVFK K T Q I K V 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 2 0 2 2 0 0 12 0 1355.7085 P01040 P01040 45 56 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 2 0.0052688 104.82 By MS/MS 5.5 3.2 1 1 1 1 4 214060 0 214060 14223 435 15100 36100;36101;36102;36103 25482;25483;25484 25484 3 0 2058900 TREDNDLDSQVSQEGLGPVLQPQPK FHRFDDVWPMDPHPRTREDNDLDSQVSQEG VSQEGLGPVLQPQPKSYFKSISVTKITKPD R T R P K S 0 1 1 3 0 4 2 2 0 0 3 1 0 0 3 2 1 0 0 2 0 0 25 1 2749.3519 O00165 O00165 181 205 HAX1 HCLS1-associated protein X-1 yes yes 3 0.00083133 72.227 By MS/MS 8 0 1 1 4739500 4739500 0 14224 73 15101 36104 25485 25485 1 312670 0 TREEIQEVR RYHGHSMSDPGVSYRTREEIQEVRSKSDPI PGVSYRTREEIQEVRSKSDPIMLLKDRMVN R T R V R S 0 2 0 0 0 1 3 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 9 1 1158.5993 P08559;P29803 P08559 303 311 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 3 0.00056288 142.36 By MS/MS By matching 7.33 0.471 2 1 2 1 19155000 19018000 136460 14225 504 15102 36105;36106;36107 25486 25486 1 392890 560190 TREGNDLYHEMIESGVINLK KAHGGYSVFAGVGERTREGNDLYHEMIESG DLYHEMIESGVINLKDATSKVALVYGQMNE R T R L K D 0 1 2 1 0 0 3 2 1 2 2 1 1 0 0 1 1 0 1 1 0 0 20 1 2317.1372 P06576 P06576 240 259 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3;4 0.00022703 111.82 By MS/MS 6 0 2 2 16210000 16210000 0 14226 478 15103 36108;36109 25487;25488 25487 2 126410 0 TREGNDLYHEMIESGVINLKDATSK KAHGGYSVFAGVGERTREGNDLYHEMIESG MIESGVINLKDATSKVALVYGQMNEPPGAR R T R S K V 1 1 2 2 0 0 3 2 1 2 2 2 1 0 0 2 2 0 1 1 0 0 25 2 2819.376 P06576 P06576 240 264 ATP5B ATP synthase subunit beta, mitochondrial yes yes 4 4.9266E-09 129.26 By MS/MS 6 0 1 1 6074500 6074500 0 14227 478 15104 36110 25489 25489 1 47369 0 TRELQSMADQEK FRSLLINAVEASCIRTRELQSMADQEKISP CIRTRELQSMADQEKISPAALKKTLLDRVK R T R E K I 1 1 0 1 0 2 2 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 12 1 1434.6773 Q96C36 Q96C36 265 276 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2 0.000329 167.2 By MS/MS 8 0 1 1 1094900 1094900 0 14228 2136 15105 36111 25490 25490 1 72227 0 TRESEEQKR RGASIVEDKLVEDLRTRESEEQKRNRVRGI LVEDLRTRESEEQKRNRVRGILRIIKPCNH R T R K R N 0 2 0 0 0 1 3 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 9 2 1161.5738 P00367 P00367 91 99 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 2;3 1.0719E-05 191.17 By MS/MS 6 0 2 2 1120100 1120100 0 14229 425 15106 36112;36113 25491;25492 25491 2 8734.3 0 TRGAEDDLNTVAAGTMTGMLYK SLALLYSAFGVIIEKTRGAEDDLNTVAAGT LNTVAAGTMTGMLYKCTGGLRGIARGGLTG K T R Y K C 3 1 1 2 0 0 1 3 0 0 2 1 2 0 0 0 4 0 1 1 0 0 22 1 2314.0933 O14925;Q5SRD1 O14925 148 169 TIMM23;TIMM23B Mitochondrial import inner membrane translocase subunit Tim23;Putative mitochondrial import inner membrane translocase subunit Tim23B yes no 3 0.0001499 84.66 By MS/MS 9 0 1 1 976650 976650 0 14230 133 15107 36114 25493 25493 83;84 1 560510 0 TRLAADVGK GATSLCFVYPLDFARTRLAADVGKAGAERE PLDFARTRLAADVGKAGAEREFRGLGDCLV R T R G K A 2 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 929.52943 P05141;P12235;P12236 P05141 139 147 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 3 0.0041285 102.95 By MS/MS By MS/MS 5.62 3.28 1 1 1 1 2 1 1 7 1 30282000 30154000 127860 14231 469;563;562 15108 36115;36116;36117;36118;36119;36120;36121;36122 25494;25495;25496;25497;25498;25499;25500 25498 7 2315300 1090800 TRLEQEIATYR MEQQNQEYKILLDVKTRLEQEIATYRRLLE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF K T R Y R R 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 11 1 1378.7205 CON__P02533;P02533;CON__Q6IFX2;CON__P19012;CON__A2A4G1;P19012;CON__Q61782;CON__P35900;CON__Q9D312;P35900;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 406 416 KRT14;KRT15;KRT20;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 2 0.0072425 133.91 By matching By MS/MS 3 0 2 1 1 1026700 804170 222580 + 14232 35;47;54 15109 36123;36124 25501 25501 1 20993 319010 TRPVVAAGAVGLAQR GDGAGFKVAMGAFDKTRPVVAAGAVGLAQR TRPVVAAGAVGLAQRALDEATKYALERKTF K T R Q R A 4 2 0 0 0 1 0 2 0 0 1 0 0 0 1 0 1 0 0 3 0 0 15 1 1464.8525 P11310 P11310 280 294 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2;3 9.1492E-05 145.81 By MS/MS 8 0.816 2 2 2 6 11462000 11462000 0 14233 552 15110 36125;36126;36127;36128;36129;36130 25502;25503 25503 2 384700 0 TRVQHGSNK NYLEGIYNVPVAAVRTRVQHGSNKRRDHRN PVAAVRTRVQHGSNKRRDHRNVRIKKPDYK R T R N K R 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 9 1 1025.5366 Q16540 Q16540 70 78 MRPL23 39S ribosomal protein L23, mitochondrial yes yes 2 0.049165 112.11 By MS/MS 9.5 0.5 1 1 2 128970 128970 0 14234 1538 15111 36131;36132 25504 25504 1 135080 0 TSAGTTDPEEATR VSAPSSTVNASASVKTSAGTTDPEEATRLL VKTSAGTTDPEEATRLLAEKRRLAREQREK K T S T R L 2 1 0 1 0 0 2 1 0 0 0 0 0 0 1 1 4 0 0 0 0 0 13 0 1334.595 Q14244 Q14244 469 481 MAP7 Ensconsin yes yes 2 1.5249E-11 196.44 By MS/MS 4 0 1 1 305810 305810 0 14235 1423 15112 36133 25505 25505 1 8348.4 0 TSALSDETK PYYKDILPCLDGYLKTSALSDETKNNWEVS LDGYLKTSALSDETKNNWEVSALSRAAQKG K T S T K N 1 0 0 1 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 0 0 0 9 0 950.45566 P78527 P78527 802 810 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00013625 168.26 By MS/MS 1.5 0.5 1 1 2 3070400 3070400 0 14236 1197 15113 36134;36135 25506;25507 25506 2 151140 0 TSALSDETKNNWEVSALSR PYYKDILPCLDGYLKTSALSDETKNNWEVS SDETKNNWEVSALSRAAQKGFNKVVLKHLK K T S S R A 2 1 2 1 0 0 2 0 0 0 2 1 0 0 0 4 2 1 0 1 0 0 19 1 2107.0182 P78527 P78527 802 820 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 3 0.0011429 98.572 By MS/MS 1 0 1 1 315100 315100 0 14237 1197 15114 36136 25508 25508 1 15395 0 TSALTQGLER ______________________________ ______________________________ M T S E R I 1 1 0 0 0 1 1 1 0 0 2 0 0 0 0 1 2 0 0 0 0 0 10 0 1074.5669 Q0VGL1 Q0VGL1 2 11 LAMTOR4 Ragulator complex protein LAMTOR4;Ragulator complex protein LAMTOR4, N-terminally processed yes yes 2 6.6381E-11 200.71 By MS/MS 10 0 1 1 2468000 2468000 0 14238 1299 15115 36137 25509 25509 1 2623200 0 TSAPITCELLNK IQEALREHSNPNYDKTSAPITCELLNKQVK YDKTSAPITCELLNKQVKVSPDMAIFITMN K T S N K Q 1 0 1 0 1 0 1 0 0 1 2 1 0 0 1 1 2 0 0 0 0 0 12 0 1345.6912 Q14204 Q14204 1993 2004 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 6.1976E-11 201.61 By MS/MS 2 0.816 1 1 1 3 3575600 3575600 0 14239 1421 15116 36138;36139;36140 25510;25511 25510 2 170630 0 TSAQVVLDGLVDK LHIVALIAQKGNFSKTSAQVVLDGLVDKIG SKTSAQVVLDGLVDKIGDVKCGNNAKEAMT K T S D K I 1 0 0 2 0 1 0 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 13 0 1343.7296 Q14008 Q14008 677 689 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00015687 151.7 By MS/MS 2.5 0.5 1 1 2 1070200 1070200 0 14240 1405 15117 36141;36142 25512 25512 1 45061 0 TSASIILR ICDDELILIKNTKARTSASIILRGANDFMC IKNTKARTSASIILRGANDFMCDEMERSLH R T S L R G 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 2 1 0 0 0 0 0 8 0 859.51272 P17987 P17987 371 378 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00019528 191.63 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 122950000 122950000 0 14241 619 15118 36143;36144;36145;36146;36147;36148;36149;36150;36151 25513;25514;25515;25516;25517;25518 25516 6 1531000 0 TSATWLALSR EADTTENQSGVSFDKTSATWLALSRIAGLC VSFDKTSATWLALSRIAGLCNRAVFQANQE K T S S R I 2 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 2 1 0 0 0 0 10 0 1104.5928 P05023 P05023 414 423 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 1.6412E-15 214.83 By MS/MS 3 1.41 1 1 1 1 1 5 11164000 11164000 0 14242 463 15119 36152;36153;36154;36155;36156 25519;25520;25521;25522;25523 25521 5 372310 0 TSCGSPNYAAPEVISGR DFGLSNMMSDGEFLRTSCGSPNYAAPEVIS CGSPNYAAPEVISGRLYAGPEVDIWSSGVI R T S G R L 2 1 1 0 1 0 1 2 0 1 0 0 0 0 2 3 1 0 1 1 0 0 17 0 1764.8101 Q13131;P54646 Q13131 183 199 PRKAA1;PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-1;5-AMP-activated protein kinase catalytic subunit alpha-2 yes no 2 1.5964E-13 210.07 By MS/MS 6 0 1 1 4903700 4903700 0 14243 1337 15120 36157 25524 25524 1 38239 0 TSDCAYFILVDR SLITQKPLPVSLHVRTSDCAYFILVDRYLS HVRTSDCAYFILVDRYLSWFLPTEGSVPPP R T S D R Y 1 1 0 2 1 0 0 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 12 0 1458.6813 Q9NXE4 Q9NXE4 218 229 SMPD4 Sphingomyelin phosphodiesterase 4 yes yes 2 0.015925 107.06 By MS/MS 5 0.816 1 1 1 3 526700 526700 0 14244 2686 15121 36158;36159;36160 25525 25525 1 14859 0 TSDCTLKEVDGLNPEGK KVELEVPQLCNFILKTSDCTLKEVDGLNPE DCTLKEVDGLNPEGKALLKKTKNSEEFAAA K T S G K A 0 0 1 2 1 0 2 2 0 0 2 2 0 0 1 1 2 0 0 1 0 0 17 1 1861.8728 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 91 107 yes yes 3 0.057847 54.103 By MS/MS 1 0 1 1 100150 100150 0 + 14245 31 15122 36161 25526 25526 1 4893.3 0 TSDIFEADIANDVK KAKHRIAHKPHSKPKTSDIFEADIANDVKS KTSDIFEADIANDVKSKDLLADKELWARLE K T S V K S 2 0 1 3 0 0 1 0 0 2 0 1 0 1 0 1 1 0 0 1 0 0 14 0 1536.7308 O94763 O94763 187 200 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 2 0.00011236 146.5 By MS/MS 5 0 1 1 1187800 1187800 0 14246 347 15123 36162 25527 25527 1 48825 0 TSDIFGSPVTATSR TPVQTRQHLNPPGGKTSDIFGSPVTATSRL KTSDIFGSPVTATSRLAHPNKPKDHVFLCE K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 0 14 0 1437.71 Q9H910 Q9H910 91 104 HN1L Hematological and neurological expressed 1-like protein yes yes 2 6.6832E-12 196.16 By MS/MS 9 0 1 1 452730 452730 0 14247 2527 15124 36163 25528 25528 1 259820 0 TSDISEPSPESSILSSR MHQIIDQVLQGGPGKTSDISEPSPESSILS DISEPSPESSILSSRKENGRSNSLPIKKTV K T S S R K 0 1 0 1 0 0 2 0 0 2 1 0 0 0 2 7 1 0 0 0 0 0 17 0 1790.8534 Q96JQ2 Q96JQ2 395 411 CLMN Calmin yes yes 2 6.0049E-25 220.53 By MS/MS 3 0 1 1 599880 599880 0 14248 2212 15125 36164 25529 25529 1 15660 0 TSDLIVLGLPWK TDASSAVKVKRAVQKTSDLIVLGLPWKTTE VQKTSDLIVLGLPWKTTEQDLKEYFSTFGE K T S W K T 0 0 0 1 0 0 0 1 0 1 3 1 0 0 1 1 1 1 0 1 0 0 12 0 1340.7704 Q13148 Q13148 103 114 TARDBP TAR DNA-binding protein 43 yes yes 2 0.030332 80.455 By MS/MS 6.5 0.5 1 1 2 235150 235150 0 14249 1340 15126 36165;36166 25530;25531 25530 2 2827.4 0 TSDQTWVK ISFIRQMVEHGGFYRTSDQTWVKLERIQFV EHGGFYRTSDQTWVKLERIQFVGACNPPTD R T S V K L 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 2 1 0 1 0 0 8 0 963.46616 Q14204 Q14204 2695 2702 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.032926 106.68 By MS/MS 1.5 0.5 1 1 2 404800 404800 0 14250 1421 15127 36167;36168 25532 25532 1 19883 0 TSDSPWFLSGSETLGR LNSNSGAGRTSRPGRTSDSPWFLSGSETLG SDSPWFLSGSETLGRLAGNTLGSRWSSGVG R T S G R L 0 1 0 1 0 0 1 2 0 0 2 0 0 1 1 4 2 1 0 0 0 0 16 0 1738.8162 O95071 O95071 107 122 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 9.4539E-21 218.06 By MS/MS 2.5 1.12 1 1 1 1 4 1044800 1044800 0 14251 364 15128 36169;36170;36171;36172 25533;25534;25535;25536 25535 4 32413 0 TSEAKYQEK PLDYAREGEVMKLLRTSEAKYQEKQRKREA VMKLLRTSEAKYQEKQRKREAEERRRFPLE R T S E K Q 1 0 0 0 0 1 2 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 9 1 1082.5244 Q9H078 Q9H078 317 325 CLPB Caseinolytic peptidase B protein homolog yes yes 2 3.3819E-22 252.72 By MS/MS 6 0 1 1 3584500 3584500 0 14252 2448 15129 36173 25537 25537 1 27952 0 TSEFTAAFVGR LWYVMQVVSQLLDPRTSEFTAAFVGRLVST LDPRTSEFTAAFVGRLVSTLISKAGRELGE R T S G R L 2 1 0 0 0 0 1 1 0 0 0 0 0 2 0 1 2 0 0 1 0 0 11 0 1184.5826 Q96P70 Q96P70 755 765 IPO9 Importin-9 yes yes 2 1.6796E-10 195.79 By MS/MS 4 0.816 1 1 1 3 2155400 2155400 0 14253 2237 15130 36174;36175;36176 25538 25538 1 62959 0 TSELIVDGQEEK KDLLSNEDAADDAFKTSELIVDGQEEKDTD AFKTSELIVDGQEEKDTDVEEGSEVEDERP K T S E K D 0 0 0 1 0 1 3 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 12 0 1346.6565 Q9H2J7 Q9H2J7 36 47 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0004867 158.08 By MS/MS 1.5 0.5 1 1 2 212340 212340 0 14254 2480 15131 36177;36178 25539 25539 1 10462 0 TSESLCQNNMVILK KHWPTFISDIVGASRTSESLCQNNMVILKL RTSESLCQNNMVILKLLSEEVFDFSSGQIT R T S L K L 0 0 2 0 1 1 1 0 0 1 2 1 1 0 0 2 1 0 0 1 0 0 14 0 1635.796 O14980 O14980 159 172 XPO1 Exportin-1 yes yes 2 1.8311E-35 263.3 By MS/MS 4 0 2 2 2164200 2164200 0 14255 142 15132;15133 36179;36180 25540;25541 25540 91 2 59080 0 TSEVIEDEKQFYSK ______________________________ MTSEVIEDEKQFYSKAKTYWKQIPPTVDGM M T S S K A 0 0 0 1 0 1 3 0 0 1 0 2 0 1 0 2 1 0 1 1 0 0 14 1 1701.8097 Q9BV86 Q9BV86 2 15 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes yes 2 0.00045361 140.24 By MS/MS 8.5 0.5 1 1 2 1062100 1062100 0 14256 2374 15134 36181;36182 25542 25542 1 346610 0 TSEVNCYR YRCGETGHVAINCSKTSEVNCYRCGESGHL VAINCSKTSEVNCYRCGESGHLARECTIEA K T S Y R C 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 8 0 1027.4393 P62633 P62633 153 160 CNBP Cellular nucleic acid-binding protein yes yes 2 1.6695E-05 207.6 By MS/MS By matching 9.67 0.471 1 2 2 1 8182300 8161300 21055 14257 1138 15135 36183;36184;36185 25543;25544 25543 2 5433200 540040 TSFFQALGITTK EVTVPAQNTGLGPEKTSFFQALGITTKISR PEKTSFFQALGITTKISRGTIEILSDVQLI K T S T K I 1 0 0 0 0 1 0 1 0 1 1 1 0 2 0 1 3 0 0 0 0 0 12 0 1312.7027 Q8NHW5;P05388 Q8NHW5 135 146 RPLP0P6;RPLP0 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 0.014277 92.247 By MS/MS 8 0 1 1 52116 52116 0 14258 473 15136 36186 25545 25545 1 3438.1 0 TSFHALTSILK RMQLSGEGAKTREYKTSFHALTSILKAEGL REYKTSFHALTSILKAEGLRGIYTGLSAGL K T S L K A 1 0 0 0 0 0 0 0 1 1 2 1 0 1 0 2 2 0 0 0 0 0 11 0 1216.6816 Q02978 Q02978 63 73 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2;3 0.0013564 142.98 By MS/MS 8 0 2 2 2460000 2460000 0 14259 1260 15137 36187;36188 25546;25547 25547 2 162290 0 TSFLDDAFR TEFIMNEYKDRKITRTSFLDDAFRKNLESA DRKITRTSFLDDAFRKNLESALRFGNPLLV R T S F R K 1 1 0 2 0 0 0 0 0 0 1 0 0 2 0 1 1 0 0 0 0 0 9 0 1070.5033 Q14204 Q14204 3612 3620 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00021751 162.97 By MS/MS 1 0 1 1 316220 316220 0 14260 1421 15138 36189 25548 25548 1 15450 0 TSFLDDAFRK TEFIMNEYKDRKITRTSFLDDAFRKNLESA RKITRTSFLDDAFRKNLESALRFGNPLLVQ R T S R K N 1 1 0 2 0 0 0 0 0 0 1 1 0 2 0 1 1 0 0 0 0 0 10 1 1198.5982 Q14204 Q14204 3612 3621 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.00042752 164.46 By MS/MS 1 0 2 2 2748500 2748500 0 14261 1421 15139 36190;36191 25549;25550 25549 2 134290 0 TSFLLNLR APRCPENAFFLDHVRTSFLLNLRRQLPQNV FFLDHVRTSFLLNLRRQLPQNVLDTSWPTP R T S L R R 0 1 1 0 0 0 0 0 0 0 3 0 0 1 0 1 1 0 0 0 0 0 8 0 962.55492 O00159 O00159 814 821 MYO1C Unconventional myosin-Ic yes yes 2 0.0018492 159.2 By MS/MS 4 0 1 1 310310 310310 0 14262 72 15140 36192 25551 25551 1 8471.1 0 TSFLTELIDR KELLKHKFITRYTKKTSFLTELIDRYKRWK RYTKKTSFLTELIDRYKRWKSEGHGEESSS K T S D R Y 0 1 0 1 0 0 1 0 0 1 2 0 0 1 0 1 2 0 0 0 0 0 10 0 1193.6292 O00506 O00506 277 286 STK25 Serine/threonine-protein kinase 25 yes yes 2 1.3981E-07 193.82 By MS/MS 6.5 0.5 1 1 2 348840 348840 0 14263 102 15141 36193;36194 25552 25552 1 3000.2 0 TSFMFLR MKQFLDFGSVNACEKTSFMFLRQELPVRLA GSVNACEKTSFMFLRQELPVRLANIMKEIS K T S L R Q 0 1 0 0 0 0 0 0 0 0 1 0 1 2 0 1 1 0 0 0 0 0 7 0 900.45276 Q15118 Q15118 74 80 PDK1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 2 0.027176 108.24 By MS/MS 7 0 1 1 340220 340220 0 14264 1479 15142 36195 25553 25553 1155 1 6079.9 0 TSFTPVGDVFELNFMNVK EHAKSVASRATVLQKTSFTPVGDVFELNFM TPVGDVFELNFMNVKFSSGYYDFLVEVEGD K T S V K F 0 0 2 1 0 0 1 1 0 0 1 1 1 3 1 1 2 0 0 3 0 0 18 0 2043.9976 P04844 P04844 323 340 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 2 3.5409E-14 184.98 By MS/MS 6 0 2 2 651120 651120 0 14265 459 15143;15144 36196;36197 25554;25555 25554 244 2 5077.5 0 TSFTSVSR RSFSTASAITPSVSRTSFTSVSRSGGGGGG ITPSVSRTSFTSVSRSGGGGGGGFGRVSLA R T S S R S 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 3 2 0 0 1 0 0 8 0 883.43995 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 30 37 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.0024972 153.71 By MS/MS By MS/MS 5.18 3.01 2 1 1 2 1 1 1 1 1 6 5 4393200 2419200 1974000 + 14266 50;61 15145 36198;36199;36200;36201;36202;36203;36204;36205;36206;36207;36208 25556;25557;25558;25559;25560 25560 5 526640 4695000 TSFVNFTDICK FVMKPPQVVRVGTKKTSFVNFTDICKLLHR GTKKTSFVNFTDICKLLHRQPKHLLAFLLA K T S C K L 0 0 1 1 1 0 0 0 0 1 0 1 0 2 0 1 2 0 0 1 0 0 11 0 1330.6227 P20042 P20042 217 227 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 1.3287E-10 199.68 By MS/MS 6.5 0.5 1 1 2 7997800 7997800 0 14267 638 15146 36209;36210 25561 25561 1 65020 0 TSGGPEAADFSDQLSLGSSR LLLSCVFRLEFLPERTSGGPEAADFSDQLS EAADFSDQLSLGSSRVPRCGQGTLLAQACQ R T S S R V 2 1 0 2 0 1 1 3 0 0 2 0 0 1 1 5 1 0 0 0 0 0 20 0 1980.9025 Q9BWH6 Q9BWH6 1016 1035 RPAP1 RNA polymerase II-associated protein 1 yes yes 2 0.00072507 128.73 By MS/MS 3 0 1 1 423060 423060 0 14268 2394 15147 36211 25562 25562 1 11044 0 TSGNPANSAR RPSSAASAFKVPAPKTSGNPANSARKPGSA VPAPKTSGNPANSARKPGSAGGPKVGGASK K T S A R K 2 1 2 0 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 0 0 0 10 0 973.45772 O75122 O75122 34 43 CLASP2 CLIP-associating protein 2 yes yes 2 0.0051037 107.11 By MS/MS 3 0 1 1 145440 145440 0 14269 279 15148 36212 25563 25563 1 3796.8 0 TSGQTSANAHSSR VEDVLKLIDIGNSCRTSGQTSANAHSSRSH CRTSGQTSANAHSSRSHAVFQIILRRKGKL R T S S R S 2 1 1 0 0 1 0 1 1 0 0 0 0 0 0 4 2 0 0 0 0 0 13 0 1302.5913 O00139 O00139 422 434 KIF2A Kinesin-like protein KIF2A yes yes 2 0.015339 88.187 By MS/MS 4.5 0.5 1 1 2 67345 67345 0 14270 69 15149 36213;36214 25564 25564 1 1984.7 0 TSGSVYITLK EQFLTELTRLFQKCRTSGSVYITLKKYDGR FQKCRTSGSVYITLKKYDGRTKPIPKKGTV R T S L K K 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 2 2 0 1 1 0 0 10 0 1067.5863 P37108 P37108 22 31 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.00016756 157.99 By MS/MS 10 0 1 1 355840 355840 0 14271 813 15150 36215 25565 25565 1 378220 0 TSIAIDTIINQK RGQRELIIGDRQTGKTSIAIDTIINQKRFN TGKTSIAIDTIINQKRFNDGSDEKKKLYCI K T S Q K R 1 0 1 1 0 1 0 0 0 4 0 1 0 0 0 1 2 0 0 0 0 0 12 0 1315.7347 P25705 P25705 219 230 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 8.9655E-24 236.92 By MS/MS By MS/MS 6.75 0.829 2 1 1 3 1 87419000 87182000 237200 14272 687 15151 36216;36217;36218;36219 25566;25567;25568;25569 25567 4 744370 727490 TSIAIDTIINQKR RGQRELIIGDRQTGKTSIAIDTIINQKRFN GKTSIAIDTIINQKRFNDGSDEKKKLYCIY K T S K R F 1 1 1 1 0 1 0 0 0 4 0 1 0 0 0 1 2 0 0 0 0 0 13 1 1471.8358 P25705 P25705 219 231 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 4.5916E-72 314.35 By MS/MS By matching 6 0 2 1 1 21213000 21197000 15754 14273 687 15152 36220;36221 25570 25570 1 165300 48317 TSIFIAHR EETILGAMKDVVKHRTSIFIAHRLSTVVDA KDVVKHRTSIFIAHRLSTVVDADEIIVLDQ R T S H R L 1 1 0 0 0 0 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 0 8 0 943.52395 O75027 O75027 659 666 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.0079015 126.28 By MS/MS 1 0 1 1 229260 229260 0 14274 276 15153 36222 25571 25571 1 11201 0 TSIFWNDVKDPVSIEER ECRDQYSVIFESGDRTSIFWNDVKDPVSIE IFWNDVKDPVSIEERARWTETYVRWSPKGT R T S E R A 0 1 1 2 0 0 2 0 0 2 0 1 0 1 1 2 1 1 0 2 0 0 17 1 2034.0058 P55884 P55884 316 332 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.0020449 106.93 By MS/MS 4.5 0.5 1 1 2 1311000 1311000 0 14275 1040 15154 36223;36224 25572 25572 1 37428 0 TSIGWLR TVNNPFLPSEDQVSKTSIGWLRLLHHCLTH PSEDQVSKTSIGWLRLLHHCLTHISDLEGM K T S L R L 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 1 1 1 0 0 0 0 7 0 831.46029 Q9NR09 Q9NR09 3326 3332 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.042356 106.42 By MS/MS 1 0 1 1 65900 65900 0 14276 2596 15155 36225 25573 25573 1 3219.8 0 TSILAAANPISGHYDR ISITKAGVKATLNARTSILAAANPISGHYD SILAAANPISGHYDRSKSLKQNINLSAPIM R T S D R S 3 1 1 1 0 0 0 1 1 2 1 0 0 0 1 2 1 0 1 0 0 0 16 0 1684.8533 Q14566 Q14566 497 512 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0037404 109.44 By MS/MS 4 0 1 1 1520800 1520800 0 14277 1436 15156 36226 25574 25574 1 41517 0 TSKDTSASAVAVGLK PVDKMQLLEIITTEKTSKDTSASAVAVGLK TSKDTSASAVAVGLKQGKVIIVVKDGPGFY K T S L K Q 3 0 0 1 0 0 0 1 0 0 1 2 0 0 0 3 2 0 0 2 0 0 15 1 1433.7726 P40939 P40939 517 531 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 3 4.5327E-06 137.73 By MS/MS 5 0 1 1 0 0 0 14278 835 15157 36227 25575 25575 1 0 0 TSLEDEEVFEQK DNLGADAIATGHYARTSLEDEEVFEQKHVK YARTSLEDEEVFEQKHVKKPEGLFRNRFEV R T S Q K H 0 0 0 1 0 1 4 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 12 0 1452.662 O75648 O75648 131 142 TRMU Mitochondrial tRNA-specific 2-thiouridylase 1 yes yes 2 9.4595E-33 252.82 By MS/MS 6.5 0.5 1 1 2 3924200 3924200 0 14279 323 15158 36228;36229 25576 25576 1 53311 0 TSLVGALAK LKKPILLEGSPGVGKTSLVGALAKASGNTL SPGVGKTSLVGALAKASGNTLVRINLSEQT K T S A K A 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 858.51747 Q9NU22 Q9NU22 1760 1768 MDN1 Midasin yes yes 2 0.007566 110.12 By MS/MS 1.5 0.5 1 1 2 605310 605310 0 14280 2635 15159 36230;36231 25577 25577 1 29705 0 TSMNVNEIFMAIAK YADDNSLLFMETSAKTSMNVNEIFMAIAKK KTSMNVNEIFMAIAKKLPKNEPQNPGANSA K T S A K K 2 0 2 0 0 0 1 0 0 2 0 1 2 1 0 1 1 0 0 1 0 0 14 0 1567.7738 P20339 P20339 166 179 RAB5A Ras-related protein Rab-5A yes yes 2 0.013078 67.749 By MS/MS 9 0 1 1 89376 89376 0 14281 640 15160 36232 25578 25578 431;432 1 51294 0 TSMTQSLREVIK ______________________________ ______________________________ M T S I K A 0 1 0 0 0 1 1 0 0 1 1 1 1 0 0 2 2 0 0 1 0 0 12 1 1391.7442 Q9NPJ3 Q9NPJ3 2 13 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 2 0.02146 73.9 By MS/MS 10 0 1 1 424530 424530 0 14282 2582 15161 36233 25579 25579 1544 1 451230 0 TSPNEGLSGNPADLER QESYGDVYGICTKLKTSPNEGLSGNPADLE SPNEGLSGNPADLERREAVFGKNFIPPKKP K T S E R R 1 1 2 1 0 0 2 2 0 0 2 0 0 0 2 2 1 0 0 0 0 0 16 0 1655.7751 P20020 P20020 65 80 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 2 0.039881 81.904 By MS/MS 2 0.816 1 1 1 3 622910 622910 0 14283 637 15162 36234;36235;36236 25580 25580 1 22801 0 TSQQLQLIDEQDSYIQSR SHASKDVAIDMMDSRTSQQLQLIDEQDSYI QLQLIDEQDSYIQSRADTMQNIESTIVELG R T S S R A 0 1 0 2 0 5 1 0 0 2 2 0 0 0 0 3 1 0 1 0 0 0 18 0 2151.0444 Q13190 Q13190 252 269 STX5 Syntaxin-5 yes yes 2 2.2482E-33 276.59 By MS/MS 7.5 0.5 1 1 2 895660 895660 0 14284 1346 15163 36237;36238 25581;25582 25581 2 16006 0 TSSAETPTIPLGSAVEAIK HQLWLSVEALKYSMKTSSAETPTIPLGSAV ETPTIPLGSAVEAIKANCSDNEFTQALTAA K T S I K A 3 0 0 0 0 0 2 1 0 2 1 1 0 0 2 3 3 0 0 1 0 0 19 0 1870.9888 Q16891 Q16891 582 600 IMMT MICOS complex subunit MIC60 yes yes 2 3.2662E-11 162.67 By MS/MS 4.5 0.5 1 1 2 3301600 3301600 0 14285 1554 15164 36239;36240 25583;25584 25583 2 127060 0 TSSAFVGKTPEASPEPK PGSEKDSDSMETEEKTSSAFVGKTPEASPE SAFVGKTPEASPEPKDQTLKMIKILSGEMA K T S P K D 2 0 0 0 0 0 2 1 0 0 0 2 0 1 3 3 2 0 0 1 0 0 17 1 1731.8679 Q99460 Q99460 303 319 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 3 0.0060534 83.751 By MS/MS 4 0 1 1 601820 601820 0 14286 2268 15165 36241 25585 25585 1 16429 0 TSSAQVEGGVHSLHSYEK VRAMMYSGELKFEKRTSSAQVEGGVHSLHS AQVEGGVHSLHSYEKRLF____________ R T S E K R 1 0 0 0 0 1 2 2 2 0 1 1 0 0 0 4 1 0 1 2 0 0 18 0 1914.9072 P12268 P12268 494 511 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2;3 1.2314E-10 181.75 By MS/MS 6.75 0.829 2 1 1 4 18122000 18122000 0 14287 564 15166 36242;36243;36244;36245 25586;25587 25587 2 166940 0 TSSDPTCVEK QCEGIKKYVVGLIIKTSSDPTCVEKEKVYI GLIIKTSSDPTCVEKEKVYIGKLNMILVQI K T S E K E 0 0 0 1 1 0 1 0 0 0 0 1 0 0 1 2 2 0 0 1 0 0 10 0 1122.4863 O14980 O14980 113 122 XPO1 Exportin-1 yes yes 2 0.0031126 113.62 By MS/MS 4 0 1 1 481800 481800 0 14288 142 15167 36246 25588 25588 1 13153 0 TSSSFAAAMAR KGKVMASMFYEVSTRTSSSFAAAMARLGGA VSTRTSSSFAAAMARLGGAVLSFSEATSSV R T S A R L 4 1 0 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 0 0 0 11 0 1098.5128 P27708 P27708 1976 1986 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.00016543 153.24 By MS/MS 1.67 0.471 1 2 3 1252200 1252200 0 14289 709 15168;15169 36247;36248;36249 25589;25590 25589 483 2 62045 0 TSSTSSSVNSQTLNR PQRNNSSKLRSSGPRTSSTSSSVNSQTLNR TSSTSSSVNSQTLNRNQPTVYIAASPPNTD R T S N R N 0 1 2 0 0 1 0 0 0 0 1 0 0 0 0 6 3 0 0 1 0 0 15 0 1567.7438 Q9NYJ8 Q9NYJ8 348 362 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 2 1.4787E-28 241.35 By MS/MS By MS/MS 5 0 2 1 1 1729800 1697300 32525 14290 2695 15170 36250;36251 25591;25592 25592 2 69765 96240 TSSVFEDPVISK ELKKTQLIKAAPAGKTSSVFEDPVISKFTN AGKTSSVFEDPVISKFTNMMMIGGNKVLAR K T S S K F 0 0 0 1 0 0 1 0 0 1 0 1 0 1 1 3 1 0 0 2 0 0 12 0 1307.6609 Q9Y2R9 Q9Y2R9 82 93 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2 0.00019051 153.1 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 21909000 21783000 126570 14291 2899 15171 36252;36253;36254 25593;25594;25595 25594 3 1641600 1079800 TSTAAASSTSTTTEEK SQKKHKCSVYYSKHKTSTAAASSTSTTTEE STAAASSTSTTTEEKQTSPLGSSLPAAKED K T S E K Q 3 0 0 0 0 0 2 0 0 0 0 1 0 0 0 4 6 0 0 0 0 0 16 0 1571.7162 A2VDJ0 A2VDJ0 989 1004 KIAA0922 Transmembrane protein 131-like yes yes 2 0.00041661 125.03 By MS/MS 2 0 1 1 71577 71577 0 14292 12 15172 36255 25596 25596 1 3557.8 0 TSTAPAASPNVR FRTVHGGLRLLGIRRTSTAPAASPNVRRLE IRRTSTAPAASPNVRRLEYKPIKKVMVANR R T S V R R 3 1 1 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 1 0 0 12 0 1170.5993 P11498 P11498 19 30 PC Pyruvate carboxylase, mitochondrial yes yes 2 0.0053474 104.43 By MS/MS By matching 4 0.707 1 2 1 3 1 3517200 3489500 27704 14293 555 15173 36256;36257;36258;36259 25597;25598 25598 2 99431 57891 TSTILACAK RLPHLLLYGPPGTGKTSTILACAKQLYKDK PPGTGKTSTILACAKQLYKDKEFGSMVLEL K T S A K Q 2 0 0 0 1 0 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 9 0 963.50592 P40937 P40937 67 75 RFC5 Replication factor C subunit 5 yes yes 2 0.0015667 134.48 By MS/MS 7.5 0.5 1 1 2 3233600 3233600 0 14294 833 15174 36260;36261 25599;25600 25600 2 145580 0 TSTPEDFIR RQELAVFCSPEPPAKTSTPEDFIRMTKGIT PEPPAKTSTPEDFIRMTKGITMATAKAVAA K T S I R M 0 1 0 1 0 0 1 0 0 1 0 0 0 1 1 1 2 0 0 0 0 0 9 0 1064.5138 Q9Y490 Q9Y490 2169 2177 TLN1 Talin-1 yes yes 2 0.01057 103.56 By MS/MS 3 0.816 1 1 1 3 1153100 1153100 0 14295 2947 15175 36262;36263;36264 25601 25601 1 45015 0 TSTSQAVFR VNQDTRLDNRVIDLRTSTSQAVFRLQSGIC RVIDLRTSTSQAVFRLQSGICHLFRETLIN R T S F R L 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 2 2 0 0 1 0 0 9 0 995.50361 P14868 P14868 189 197 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.0028304 120.87 By MS/MS By matching 3.75 2.28 1 1 2 3 1 8102000 8062200 39810 14296 594 15176 36265;36266;36267;36268 25602;25603 25603 2 90123 122090 TSTTAEKTDEEEKEDR IKEEKVKADTNGIIKTSTTAEKTDEEEKED STTAEKTDEEEKEDRAAQSLLNKLIRSNLV K T S D R A 1 1 0 2 0 0 5 0 0 0 0 2 0 0 0 1 4 0 0 0 0 0 16 2 1867.8283 Q9NUU7 Q9NUU7 40 55 DDX19A ATP-dependent RNA helicase DDX19A yes yes 3 0.013079 80.609 By MS/MS 6 0 1 1 2007400 2007400 0 14297 2643 15177 36269 25604 25604 1 15654 0 TSTTGVATTQSPTPR NPSSSVPPPSAGSVKTSTTGVATTQSPTPR TSTTGVATTQSPTPRSHSPSASQSGSQLRN K T S P R S 1 1 0 0 0 1 0 1 0 0 0 0 0 0 2 2 6 0 0 1 0 0 15 0 1503.7529 Q8WWI1 Q8WWI1 1576 1590 LMO7 LIM domain only protein 7 yes yes 2 0.00053804 122.46 By MS/MS 3 0 1 1 469210 469210 0 14298 2039 15178 36270 25605 25605 1 12249 0 TSVFLVR CSDAVPGGLFGFAARTSVFLVRVGPGAGES GLFGFAARTSVFLVRVGPGAGESPGTPPFR R T S V R V 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 2 0 0 7 0 820.48069 Q8TEQ6 Q8TEQ6 34 40 GEMIN5 Gem-associated protein 5 yes yes 2 0.011025 151.17 By MS/MS 3 0 1 1 884390 884390 0 14299 2003 15179 36271 25606 25606 1 23087 0 TSVLAAANPIESQWNPK LSIAKAGIICQLNARTSVLAAANPIESQWN VLAAANPIESQWNPKKTTIENIQLPHTLLS R T S P K K 3 0 2 0 0 1 1 0 0 1 1 1 0 0 2 2 1 1 0 1 0 0 17 0 1824.937 P33991 P33991 611 627 MCM4 DNA replication licensing factor MCM4 yes yes 2 1.6889E-18 203.87 By MS/MS 4.5 0.5 1 1 2 5031200 5031200 0 14300 773 15180 36272;36273 25607 25607 1 143180 0 TSVLEMIAQAR HLPRVVVVGDQSAGKTSVLEMIAQARIFPR SAGKTSVLEMIAQARIFPRGSGEMMTRSPV K T S A R I 2 1 0 0 0 1 1 0 0 1 1 0 1 0 0 1 1 0 0 1 0 0 11 0 1217.6438 O60313 O60313 302 312 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2 0.0034121 109.83 By MS/MS 5.4 1.02 1 2 1 1 5 2734300 2734300 0 14301 244 15181;15182 36274;36275;36276;36277;36278 25608;25609 25608 142 1 44244 0 TSVPVLDAELFIPPK NSTANSIMASYQQQKTSVPVLDAELFIPPK TSVPVLDAELFIPPKINRRTQWKLSLLD__ K T S P K I 1 0 0 1 0 0 1 0 0 1 2 1 0 1 3 1 1 0 0 2 0 0 15 0 1624.9076 O95163 O95163 1305 1319 IKBKAP Elongator complex protein 1 yes yes 2 0.031852 75.229 By MS/MS 3 0 1 1 157080 157080 0 14302 368 15183 36279 25610 25610 1 4100.7 0 TSVVGLFLR DLSDSFSGTEPEVHKTSVVGLFLRHMILAY EPEVHKTSVVGLFLRHMILAYSKLSFSQVF K T S L R H 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 1 1 0 0 2 0 0 9 0 990.58622 Q9UJX4 Q9UJX4 129 137 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 2 0.00014174 167.9 By MS/MS 5 0 1 1 147810 147810 0 14303 2804 15184 36280 25611 25611 1 6075.7 0 TSYAQHQQVR FCVGFTKKRNNQIRKTSYAQHQQVRQIRKK NQIRKTSYAQHQQVRQIRKKMMEIMTREVQ K T S V R Q 1 1 0 0 0 3 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 0 10 0 1216.5949 P61247 P61247 153 162 RPS3A 40S ribosomal protein S3a yes yes 2;3 0.00010844 164.68 By MS/MS By matching 8.2 0.4 4 1 3 2 5842400 5734100 108240 14304 1094 15185 36281;36282;36283;36284;36285 25612;25613 25612 2 392870 923420 TTAAFQQGK YQKWMEEQAQSLIDKTTAAFQQGKIPPTPF QSLIDKTTAAFQQGKIPPTPFSAPPPAGAM K T T G K I 2 0 0 0 0 2 0 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 9 0 950.48214 P09234 P09234 53 61 SNRPC U1 small nuclear ribonucleoprotein C yes yes 2 0.0028304 120.87 By MS/MS 9 0 1 1 299860 299860 0 14305 514 15186 36286 25614 25614 1 172090 0 TTAENEFVMLK VEDFKNKYEDEINKRTTAENEFVMLKKDVD INKRTTAENEFVMLKKDVDAAYMNKVELEA R T T L K K 1 0 1 0 0 0 2 0 0 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 1281.6275 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 266 276 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.0083767 96.342 By matching By MS/MS 3.71 1.67 1 1 1 1 2 1 1 6 686920 286960 399960 + 14306 50;61 15187 36287;36288;36289;36290;36291;36292;36293 25615;25616;25617 25616 35 3 11795 908630 TTALIFSSGK PKRFAAVIMRIREPRTTALIFSSGKMVCTG IREPRTTALIFSSGKMVCTGAKSEEQSRLA R T T G K M 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 2 2 0 0 0 0 0 10 0 1023.5601 P20226;Q6SJ96 P20226 209 218 TBP;TBPL2 TATA-box-binding protein;TATA box-binding protein-like protein 2 yes no 2 0.00067442 137.95 By MS/MS 7 0 1 1 1082100 1082100 0 14307 639 15188 36294 25618 25618 1 19336 0 TTANAIYCPPK LSNLPKARAALTSARTTANAIYCPPKLQAT TSARTTANAIYCPPKLQATLDMQSGIIHAA R T T P K L 2 0 1 0 1 0 0 0 0 1 0 1 0 0 2 0 2 0 1 0 0 0 11 0 1234.6016 O00231 O00231 195 205 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 1.1929E-16 230.06 By MS/MS 7.5 0.5 1 1 2 5157200 5157200 0 14308 80 15189 36295;36296 25619 25619 1 102300 0 TTASTQMNVQSSR ESEMMQCLKLGALSRTTASTQMNVQSSRSH SRTTASTQMNVQSSRSHAIFTIHVCQTRVC R T T S R S 1 1 1 0 0 2 0 0 0 0 0 0 1 0 0 3 3 0 0 1 0 0 13 0 1409.6569 Q7Z4S6;O75037 Q7Z4S6 213 225 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein KIF21B yes no 2 0.0015665 124.39 By MS/MS 2 0 1 1 243370 243370 0 14309 1797 15190 36297 25620 25620 1 12097 0 TTASTSQVR ______________________________ ______________________________ M T T V R Q 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 3 0 0 1 0 0 9 0 949.48287 P02794 P02794 2 10 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 2 0.0016591 152.34 By MS/MS 9 0 1 1 0 0 0 14310 439 15191 36298 25621 25621 1 0 0 TTDDTTTDNYIAQGK SSNVNKQEENGVFIKTTDDTTTDNYIAQGK TTDDTTTDNYIAQGKRKSNEMITNLGKKQK K T T G K R 1 0 1 3 0 1 0 1 0 1 0 1 0 0 0 0 5 0 1 0 0 0 15 0 1642.7322 Q7Z2T5 Q7Z2T5 595 609 TRMT1L TRMT1-like protein yes yes 2 7.7265E-21 227.48 By MS/MS 4.5 0.5 1 1 2 910250 910250 0 14311 1776 15192 36299;36300 25622 25622 1 30146 0 TTDGVYEGVAIGGDR RSGGMSNELNNIISRTTDGVYEGVAIGGDR TTDGVYEGVAIGGDRYPGSTFMDHVLRYQD R T T D R Y 1 1 0 2 0 0 1 4 0 1 0 0 0 0 0 0 2 0 1 2 0 0 15 0 1508.7107 P53396 P53396 677 691 ACLY ATP-citrate synthase yes yes 2 1.171E-09 177.1 By MS/MS 3 1.58 1 1 1 1 4 3981000 3981000 0 14312 1001 15193 36301;36302;36303;36304 25623;25624 25624 2 120260 0 TTDLLTDWEK LQMKIVQEDRAVESRTTDLLTDWEKTKPVT AVESRTTDLLTDWEKTKPVTGNLRPEEALQ R T T E K T 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 3 1 0 0 0 0 10 0 1220.5925 Q14204 Q14204 1254 1263 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 7.2414E-07 186.41 By MS/MS 2 0.816 1 1 1 3 1415300 1415300 0 14313 1421 15194 36305;36306;36307 25625 25625 1 65978 0 TTDVLTIK AKKKLIKLVGERYCKTTDVLTIKTDRCPLR VGERYCKTTDVLTIKTDRCPLRRQNYDYAV K T T I K T 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 3 0 0 1 0 0 8 0 889.51205 P82673 P82673 201 208 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 2 0.0043405 139.97 By MS/MS 7 0.816 1 1 1 3 56281000 56281000 0 14314 1204 15195 36308;36309;36310 25626 25626 1 547550 0 TTEAKPESK LRSPESLKNMEKASKTTEAKPESKQEPVKT MEKASKTTEAKPESKQEPVKTEMGPPPSPA K T T S K Q 1 0 0 0 0 0 2 0 0 0 0 2 0 0 1 1 2 0 0 0 0 0 9 1 989.50294 O95071 O95071 591 599 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.0091152 138.06 By MS/MS 2 0 1 1 74260 74260 0 14315 364 15196 36311 25627 25627 1 3691.1 0 TTEALKSEEK IDSKVADAATEVQHKTTEALKSEEKAMDIS EVQHKTTEALKSEEKAMDISAMPRGTPLYG K T T E K A 1 0 0 0 0 0 3 0 0 0 1 2 0 0 0 1 2 0 0 0 0 0 10 1 1134.5768 Q5SW79 Q5SW79 154 163 CEP170 Centrosomal protein of 170 kDa yes yes 2 1.0341E-20 243.29 By MS/MS 2 0 1 1 442350 442350 0 14316 1621 15197 36312 25628 25628 1 21987 0 TTECISEESEPEDQKLTLEK SFCKDLVEVADILEKTTECISEESEPEDQK SEESEPEDQKLTLEKVFRGLLLLEAKLKSV K T T E K V 0 0 0 1 1 1 6 0 0 1 2 2 0 0 1 2 3 0 0 0 0 0 20 1 2365.0843 Q8TAA5 Q8TAA5 123 142 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 3 0.012743 62.438 By MS/MS 9 0 1 1 1053700 1053700 0 14317 1979 15198 36313 25629 25629 1 604730 0 TTELPAADPFALAPFPSK QSIAGSVSITSLSSRTTELPAADPFALAPF LPAADPFALAPFPSKSGKKP__________ R T T S K S 4 0 0 1 0 0 1 0 0 0 2 1 0 2 4 1 2 0 0 0 0 0 18 0 1871.9669 Q6ZSR9 Q6ZSR9 333 350 Uncharacterized protein FLJ45252 yes yes 2 0.0016087 113.69 By MS/MS 3.5 0.5 1 1 2 197630 197630 0 14318 1745 15199 36314;36315 25630 25630 1 5187.8 0 TTEMETIYDLGTK PATGTGSKVGKLTLKTTEMETIYDLGTKMI LKTTEMETIYDLGTKMIESLTKDKVQAGDV K T T T K M 0 0 0 1 0 0 2 1 0 1 1 1 1 0 0 0 4 0 1 0 0 0 13 0 1500.7018 Q9Y230 Q9Y230 165 177 RUVBL2 RuvB-like 2 yes yes 2 1.2185E-25 244.16 By MS/MS By MS/MS 6.25 0.433 3 1 3 1 18782000 18720000 62031 14319 2864 15200;15201 36316;36317;36318;36319 25631;25632;25633 25632 1655 3 147250 190240 TTENPTLER HCLDDLPLSTPSSPRTTENPTLERKPYSSP TPSSPRTTENPTLERKPYSSPRDSSLPALT R T T E R K 0 1 1 0 0 0 2 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 9 0 1059.5197 Q68DK2 Q68DK2 1278 1286 ZFYVE26 Zinc finger FYVE domain-containing protein 26 yes yes 2 0.002454 124.92 By MS/MS 2 0 1 1 155670 155670 0 14320 1673 15202 36320 25634 25634 1 7737.7 0 TTEVGSVSEVKK ______________________________ ______________________________ M T T K K D 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 2 2 0 0 3 0 0 12 1 1262.6718 O43491 O43491 2 13 EPB41L2 Band 4.1-like protein 2 yes yes 2 0.00010425 169.99 By MS/MS 3 0 1 1 1581300 1581300 0 14321 204 15203 36321 25635 25635 1 41279 0 TTFEDLIQR KITKKPIPDEHLILKTTFEDLIQRCLSSAT EHLILKTTFEDLIQRCLSSATDPQTKRKLD K T T Q R C 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 9 0 1121.5717 O94979 O94979 1121 1129 SEC31A Protein transport protein Sec31A yes yes 2 0.030852 90.601 By MS/MS 3.5 0.5 1 1 2 2787800 2787800 0 14322 362 15204 36322;36323 25636 25636 1 73349 0 TTFQDELIR STTLAYTKSPKVTKRTTFQDELIRAITARS PKVTKRTTFQDELIRAITARSARQRSSEYS R T T I R A 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 9 0 1121.5717 Q49MG5 Q49MG5 22 30 MAP9 Microtubule-associated protein 9 yes yes 2 0.0025995 123.35 By MS/MS 4 0 1 1 722250 722250 0 14323 1574 15205 36324 25637 25637 1 19717 0 TTGEGTSLR VKRGVLLMLFGGVPKTTGEGTSLRGDINVC FGGVPKTTGEGTSLRGDINVCIVGDPSTAK K T T L R G 0 1 0 0 0 0 1 2 0 0 1 0 0 0 0 1 3 0 0 0 0 0 9 0 920.45632 Q14566 Q14566 379 387 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0017265 132.76 By MS/MS 4.5 0.5 1 1 2 2335000 2335000 0 14324 1436 15206 36325;36326 25638 25638 1 65526 0 TTGEVVSGVVSK EAALVYVENAHVAGKTTGEVVSGVVSKVFN AGKTTGEVVSGVVSKVFNQPKAKAKELGIE K T T S K V 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 2 2 0 0 4 0 0 12 0 1161.6241 Q14008 Q14008 85 96 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 2.7637E-05 170.89 By MS/MS 2.5 1.12 1 1 1 1 4 5915900 5915900 0 14325 1405 15207 36327;36328;36329;36330 25639;25640 25639 2 268340 0 TTGFGMIYDSLDYAK VIFVFGFRTHFGGGKTTGFGMIYDSLDYAK TTGFGMIYDSLDYAKKNEPKHRLARHGLYE K T T A K K 1 0 0 2 0 0 0 2 0 1 1 1 1 1 0 1 2 0 2 0 0 0 15 0 1680.7705 P62847 P62847 69 83 RPS24 40S ribosomal protein S24 yes yes 2 2.2971E-14 198.97 By MS/MS 9.5 0.5 1 1 2 2420300 2420300 0 14326 1149 15208 36331;36332 25641;25642 25642 900 2 1977300 0 TTGFTFVVDR EKNGLQKYEYVLHPRTTGFTFVVDRLREGK VLHPRTTGFTFVVDRLREGKNLDAVHDITV R T T D R L 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 3 0 0 2 0 0 10 0 1141.5768 Q6UWP7 Q6UWP7 235 244 LCLAT1 Lysocardiolipin acyltransferase 1 yes yes 2 0.058813 80.755 By MS/MS 1.5 0.5 1 1 2 225820 225820 0 14327 1729 15209 36333;36334 25643 25643 1 11072 0 TTGLVGLAVCNTPHER ______________________________ TGLVGLAVCNTPHERLRILYTKILDVLEEI K T T E R L 1 1 1 0 1 0 1 2 1 0 2 0 0 0 1 0 3 0 0 2 0 0 16 0 1723.8676 Q16718 Q16718 8 23 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2;3 8.9543E-07 204.32 By MS/MS 10 0 2 2 1550900 1550900 0 14328 1544 15210 36335;36336 25644;25645 25645 2 1648400 0 TTGQVVAMKK IGEGTYGVVYKGRHKTTGQVVAMKKIRLES KGRHKTTGQVVAMKKIRLESEEEGVPSTAI K T T K K I 1 0 0 0 0 1 0 1 0 0 0 2 1 0 0 0 2 0 0 2 0 0 10 1 1061.5903 P06493 P06493 25 34 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.0082673 114.86 By MS/MS 8 0 1 1 417770 417770 0 14329 477 15211 36337 25646 25646 261 1 27560 0 TTHFVEGGDAGNREDQINR WPFKLSSPRGGMKKKTTHFVEGGDAGNRED VEGGDAGNREDQINRLIRRMN_________ K T T N R L 1 2 2 2 0 1 2 3 1 1 0 0 0 1 0 0 2 0 0 1 0 0 19 1 2114.973 P18124 P18124 224 242 RPL7 60S ribosomal protein L7 yes yes 3 0.029677 58.164 By MS/MS 8 0 1 1 763440 763440 0 14330 622 15212 36338 25647 25647 1 50364 0 TTHLIAKEEMIHNLQ DWSQKLNSLMSLVNKTTHLIAKEEMIHNLQ TTHLIAKEEMIHNLQ_______________ K T T L Q - 1 0 1 0 0 1 2 0 2 2 2 1 1 0 0 0 2 0 0 0 0 0 15 1 1776.9193 O00232 O00232 442 456 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 3 0.018324 71.279 By MS/MS 6 0 1 1 2141400 2141400 0 14331 81 15213 36339 25648 25648 1 16699 0 TTIAQQVK LEALELLGNFKDKERTTIAQQVKGKKVWIG NFKDKERTTIAQQVKGKKVWIGIKKLLMLI R T T V K G 1 0 0 0 0 2 0 0 0 1 0 1 0 0 0 0 2 0 0 1 0 0 8 0 887.50763 P46459 P46459 692 699 NSF Vesicle-fusing ATPase yes yes 2 0.010733 118.74 By MS/MS 4 0.816 1 1 1 3 5936100 5936100 0 14332 881 15214 36340;36341;36342 25649 25649 1 242940 0 TTIFSPEGR ______________________________ RRYDSRTTIFSPEGRLYQVEYAMEAIGHAG R T T G R L 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 9 0 1006.5084 P25789 P25789 9 17 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.0028989 127.46 By MS/MS By MS/MS 8.75 0.829 2 1 1 3 1 11267000 11074000 192870 14333 691 15215 36343;36344;36345;36346 25650;25651 25651 2 948980 1645400 TTIIEGR PARGFREVVETQEGKTTIIEGRITATPKES VVETQEGKTTIIEGRITATPKESPNPPNPS K T T G R I 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 7 0 788.43922 Q9NVS2 Q9NVS2 46 52 MRPS18A 28S ribosomal protein S18a, mitochondrial yes yes 2 0.039937 108.09 By MS/MS 9.5 0.5 1 1 2 1269400 1269400 0 14334 2660 15216 36347;36348 25652 25652 1 858420 0 TTIVICCSPSSYNESETK KMTRILQDSLGGNCRTTIVICCSPSSYNES VICCSPSSYNESETKSTLLFGQRAKTIKNT R T T T K S 0 0 1 0 2 0 2 0 0 2 0 1 0 0 1 4 3 0 1 1 0 0 18 0 2074.9187 P33176 P33176 296 313 KIF5B Kinesin-1 heavy chain yes yes 2 1.1489E-18 201.48 By MS/MS 4 0 1 1 1120400 1120400 0 14335 767 15217 36349 25653 25653 1 30586 0 TTLAHVIAR KQKVALLCGPPGLGKTTLAHVIARHAGYSV PPGLGKTTLAHVIARHAGYSVVEMNASDDR K T T A R H 2 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 2 0 0 1 0 0 9 0 980.57671 Q8WVB6 Q8WVB6 381 389 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.00031184 157.58 By MS/MS 4.5 0.5 1 1 2 1117300 1117300 0 14336 2027 15218 36350;36351 25654 25654 1 31904 0 TTLALFEFTDR ADMATFMVNSLYMMKTTLALFEFTDRRLEM YMMKTTLALFEFTDRRLEMLQFQIEAHLDT K T T D R R 1 1 0 1 0 0 1 0 0 0 2 0 0 2 0 0 3 0 0 0 0 0 11 0 1312.6663 Q9Y2V7 Q9Y2V7 510 520 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 2.3817E-07 191.4 By MS/MS 5 0 1 1 245150 245150 0 14337 2903 15219 36352 25655 25655 1 10077 0 TTLDDKLLGEK ______________________________ ______________________________ M T T E K L 0 0 0 2 0 0 1 1 0 0 3 2 0 0 0 0 2 0 0 0 0 0 11 1 1231.666 Q13371 Q13371 2 12 PDCL Phosducin-like protein yes yes 2 0.0050221 123.11 By MS/MS 7.5 0.5 1 1 2 3333900 3333900 0 14338 1361 15220 36353;36354 25656;25657 25657 2 114980 0 TTLLHMLK KSGKLVFLGLDNAGKTTLLHMLKDDRLGQH GLDNAGKTTLLHMLKDDRLGQHVPTLHPTS K T T L K D 0 0 0 0 0 0 0 0 1 0 3 1 1 0 0 0 2 0 0 0 0 0 8 0 955.55247 Q9NR31;Q9Y6B6 Q9NR31 39 46 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b yes no 2 0.011422 111.04 By MS/MS 9 0 1 1 286100 286100 0 14339 2599 15221 36355 25658 25658 1546 1 164200 0 TTLLPGLLK VHISNPKTAEFQVARTTLLPGLLKTIAANR EFQVARTTLLPGLLKTIAANRKMPLPLKLF R T T L K T 0 0 0 0 0 0 0 1 0 0 4 1 0 0 1 0 2 0 0 0 0 0 9 0 954.61137 Q9NSD9 Q9NSD9 452 460 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 2 0.037519 86.833 By MS/MS 5 0 1 1 473540 473540 0 14340 2623 15222 36356 25659 25659 1 19464 0 TTLQVDTLNAELAAER EEQSNMELLNDRFRKTTLQVDTLNAELAAE TLQVDTLNAELAAERSAAQKSDNARQQLER K T T E R S 3 1 1 1 0 1 2 0 0 0 3 0 0 0 0 0 3 0 0 1 0 0 16 0 1743.9003 P35580 P35580 1762 1777 MYH10 Myosin-10 yes yes 2 2.3347E-10 187.63 By MS/MS 2 0 1 1 250510 250510 0 14341 794 15223 36357 25660 25660 1 12452 0 TTLTAAITK PHVNVGTIGHVDHGKTTLTAAITKILAEGG HVDHGKTTLTAAITKILAEGGGAKFKKYEE K T T T K I 2 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 4 0 0 0 0 0 9 0 918.5386 P49411 P49411 71 79 TUFM Elongation factor Tu, mitochondrial yes yes 2 2.2663E-07 195.05 By MS/MS By matching 7.5 1.5 2 2 1 1 5 1 172950000 172910000 39382 14342 918 15224 36358;36359;36360;36361;36362;36363 25661;25662;25663;25664 25661 4 7553000 120780 TTLVIMER IVKNSAKDCYPAVQKTTLVIMERLQQVLQM CYPAVQKTTLVIMERLQQVLQMESHIQSTS K T T E R L 0 1 0 0 0 0 1 0 0 1 1 0 1 0 0 0 2 0 0 1 0 0 8 0 961.52665 Q14974 Q14974 550 557 KPNB1 Importin subunit beta-1 yes yes 2 0.0078656 126.41 By MS/MS 4 0 1 1 1568900 1568900 0 14343 1452 15225 36364 25665 25665 1 42829 0 TTNFAGILSQGLR FKQLHNRRLLWHGSRTTNFAGILSQGLRIA SRTTNFAGILSQGLRIAPPEAPVTGYMFGK R T T L R I 1 1 1 0 0 1 0 2 0 1 2 0 0 1 0 1 2 0 0 0 0 0 13 0 1376.7412 P09874 P09874 866 878 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 7.8246E-08 225.79 By MS/MS 5.29 1.67 1 2 1 1 1 1 7 7750300 7750300 0 14344 521 15226 36365;36366;36367;36368;36369;36370;36371 25666;25667;25668;25669 25667 4 194020 0 TTNFEGFLAK AKEIEVKLLLFAIQRTTNFEGFLAKRFSGC FAIQRTTNFEGFLAKRFSGCTLTDGTLKKL R T T A K R 1 0 1 0 0 0 1 1 0 0 1 1 0 2 0 0 2 0 0 0 0 0 10 0 1126.5659 Q5VIR6 Q5VIR6 351 360 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0043235 109.66 By MS/MS 4.5 0.5 1 1 2 1757300 1757300 0 14345 1645 15227 36372;36373 25670;25671 25670 2 53004 0 TTPALLPLSGR ______________________________ ______________________________ M T T G R R 1 1 0 0 0 0 0 1 0 0 3 0 0 0 2 1 2 0 0 0 0 0 11 0 1124.6554 O60476 O60476 2 12 MAN1A2 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB yes yes 2 0.036553 64.103 By MS/MS 5 0 1 1 379740 379740 0 14346 247 15228 36374 25672 25672 1 15609 0 TTPEADDWSNPSSEPR ERLPVFNKSAWRHYKTTPEADDWSNPSSEP TPEADDWSNPSSEPRDASKYKAKQ______ K T T P R D 1 1 1 2 0 0 2 0 0 0 0 0 0 0 3 3 2 1 0 0 0 0 16 0 1787.7598 Q15120 Q15120 382 397 PDK3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 2 0.00032093 128.35 By MS/MS 6.5 0.5 1 1 2 2097600 2097600 0 14347 1481 15229 36375;36376 25673 25673 1 26510 0 TTPELEIVLQK PHKYCLSILTSHVKKTTPELEIVLQKVHEL HVKKTTPELEIVLQKVHELQGNAPSDPDAV K T T Q K V 0 0 0 0 0 1 2 0 0 1 2 1 0 0 1 0 2 0 0 1 0 0 11 0 1269.718 O95163 O95163 847 857 IKBKAP Elongator complex protein 1 yes yes 2 0.015288 93.598 By MS/MS 3 1.41 1 1 1 1 1 5 1630200 1630200 0 14348 368 15230 36377;36378;36379;36380;36381 25674;25675 25674 2 52942 0 TTPNKTPPGADPK ______________________________ ______________________________ M T T P K Q 1 0 1 1 0 0 0 1 0 0 0 2 0 0 4 0 3 0 0 0 0 0 13 1 1322.683 Q9UM13 Q9UM13 2 14 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 2 0.018077 100.09 By MS/MS 9 0 1 1 1168300 1168300 0 14349 2832 15231 36382 25676 25676 1 670510 0 TTPSVVAFTADGER EGKQAKVLENAEGARTTPSVVAFTADGERL RTTPSVVAFTADGERLVGMPAKRQAVTNPN R T T E R L 2 1 0 1 0 0 1 1 0 0 0 0 0 1 1 1 3 0 0 2 0 0 14 0 1449.71 P38646 P38646 86 99 HSPA9 Stress-70 protein, mitochondrial yes yes 2 6.3634E-08 202.05 By MS/MS By MS/MS 7.23 1.85 4 1 2 2 2 2 11 2 112550000 111720000 828240 14350 820 15232 36383;36384;36385;36386;36387;36388;36389;36390;36391;36392;36393;36394;36395 25677;25678;25679;25680;25681;25682;25683;25684;25685 25681 9 7491700 2450800 TTPSYVAFTDTER QHGKVEIIANDQGNRTTPSYVAFTDTERLI NRTTPSYVAFTDTERLIGDAAKNQVAMNPT R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 P11142;P54652;P0DMV9;P0DMV8;P17066;P48741 P11142 37 49 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 1.805E-07 180.19 By MS/MS By MS/MS 5.69 2.33 1 1 1 4 2 1 1 1 1 10 3 367540000 366240000 1301200 14351 546;528;611 15233 36396;36397;36398;36399;36400;36401;36402;36403;36404;36405;36406;36407;36408 25686;25687;25688;25689;25690;25691;25692;25693;25694;25695;25696;25697 25696 12 20817000 3856100 TTQFSCTLGEK CDGKNLTIKTESTLKTTQFSCTLGEKFEET STLKTTQFSCTLGEKFEETTADGRKTQTVC K T T E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 1 3 0 0 0 0 0 11 0 1270.5864 Q01469 Q01469 62 72 FABP5 Fatty acid-binding protein, epidermal yes yes 2 0.0019182 121.36 By MS/MS 9.5 0.5 1 1 2 462770 462770 0 14352 1242 15234 36409;36410 25698 25698 1 387550 0 TTQLGPGR QAPGKRKCNCRQEMRTTQLGPGRFQMTQEV NCRQEMRTTQLGPGRFQMTQEVVCDECPNV R T T G R F 0 1 0 0 0 1 0 2 0 0 1 0 0 0 1 0 2 0 0 0 0 0 8 0 828.44537 Q9UBS4 Q9UBS4 177 184 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 2 0.0038151 143.89 By MS/MS 7 0 1 1 8137700 8137700 0 14353 2756 15235 36411 25699 25699 1 145420 0 TTQLLFLK LGIPDAVSYIKKRYKTTQLLFLKAACVGQG YIKKRYKTTQLLFLKAACVGQGLVDQVEAS K T T L K A 0 0 0 0 0 1 0 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 8 0 962.58007 O94874 O94874 290 297 UFL1 E3 UFM1-protein ligase 1 yes yes 2 0.003131 148.99 By MS/MS 5.5 1.12 1 1 1 1 4 3875700 3875700 0 14354 354 15236 36412;36413;36414;36415 25700;25701 25701 2 135190 0 TTQQIDLQGPGPWGFR ______________________________ TQQIDLQGPGPWGFRLVGGKDFEQPLAISR M T T F R L 0 1 0 1 0 3 0 3 0 1 1 0 0 1 2 0 2 1 0 0 0 0 16 0 1799.8955 O00151 O00151 2 17 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.0007298 115.57 By MS/MS 7.5 0.5 1 1 2 470570 470570 0 14355 71 15237 36416;36417 25702;25703 25702 2 17737 0 TTSASSHLNK ______________________________ ______________________________ M T T N K G 1 0 1 0 0 0 0 0 1 0 1 1 0 0 0 3 2 0 0 0 0 0 10 0 1044.52 P15104 P15104 2 11 GLUL Glutamine synthetase yes yes 2 4.1492E-07 181.55 By MS/MS 8.5 1.12 1 1 1 1 4 4330700 4330700 0 14356 596 15238 36418;36419;36420;36421 25704 25704 1 270080 0 TTSGALFPSLVPGSR ______________________________ TTSGALFPSLVPGSRGASNKYLVEFRAGKM M T T S R G 1 1 0 0 0 0 0 2 0 0 2 0 0 1 2 3 2 0 0 1 0 0 15 0 1488.7936 Q16186 Q16186 2 16 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 0.0061588 103.34 By MS/MS 7.5 0.5 1 1 2 3981400 3981400 0 14357 1531 15239 36422;36423 25705 25705 1 73593 0 TTSGINPR SEGGESEDLQCVCLKTTSGINPRHISSLEV LQCVCLKTTSGINPRHISSLEVIGAGLHCP K T T P R H 0 1 1 0 0 0 0 1 0 1 0 0 0 0 1 1 2 0 0 0 0 0 8 0 844.44028 CON__P02777 CON__P02777 175 182 yes yes 2 0.019586 107.29 By MS/MS By matching 9.5 0.5 1 1 1 1 1072900 1045900 27082 + 14358 44 15240 36424;36425 25706 25706 1 1111600 291870 TTSIATTTTTTTESVEEVVR VEEEAEEPYEEATERTTSIATTTTTTTESV TTTTTTTESVEEVVREVCSEQAETGPCRAM R T T V R E 1 1 0 0 0 0 3 0 0 1 0 0 0 0 0 2 9 0 0 3 0 0 20 0 2126.059 P05067 P05067 269 288 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes yes 2 0.00061872 146.77 By MS/MS 4 0 1 1 508770 508770 0 14359 465 15241 36426 25707 25707 1 13889 0 TTSILCLAR NVPNIIIAGPPGTGKTTSILCLARALLGPA PPGTGKTTSILCLARALLGPALKDAMLELN K T T A R A 1 1 0 0 1 0 0 0 0 1 2 0 0 0 0 1 2 0 0 0 0 0 9 0 1033.559 P35250 P35250 83 91 RFC2 Replication factor C subunit 2 yes yes 2 0.0059111 155 By MS/MS 7.5 0.5 1 1 2 2005400 2005400 0 14360 786 15242 36427;36428 25708;25709 25709 2 35838 0 TTSNNTYEVEK NLRAVMATHGVKGTRTTSNNTYEVEKTLGI KGTRTTSNNTYEVEKTLGIEAARTTIINEI R T T E K T 0 0 2 0 0 0 2 0 0 0 0 1 0 0 0 1 3 0 1 1 0 0 11 0 1284.5834 O14802 O14802 1246 1256 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 1.0019E-07 193.83 By MS/MS 3 0 1 1 477790 477790 0 14361 128 15243 36429 25710 25710 1 12473 0 TTSQLCWPLLK AFNSLAWKDTLSCQRTTSQLCWPLLKQVLS SCQRTTSQLCWPLLKQVLSGTLLADAVTWL R T T L K Q 0 0 0 0 1 1 0 0 0 0 3 1 0 0 1 1 2 1 0 0 0 0 11 0 1345.7064 Q9HAV4 Q9HAV4 1047 1057 XPO5 Exportin-5 yes yes 2 0.043104 95.523 By MS/MS 3.5 0.5 1 1 2 161780 161780 0 14362 2546 15244 36430;36431 25711 25711 1 4287.1 0 TTTAAAVASTGPSSR PASRSGSKSTQTVAKTTTAAAVASTGPSSR TTTAAAVASTGPSSRSPSTLLPKKPTAIKT K T T S R S 4 1 0 0 0 0 0 1 0 0 0 0 0 0 1 3 4 0 0 1 0 0 15 0 1376.6896 P27816 P27816 810 824 MAP4 Microtubule-associated protein 4 yes yes 2 1.47E-05 143.42 By MS/MS By matching 2.67 0.471 1 2 2 1 1009900 994340 15592 14363 710 15245 36432;36433;36434 25712;25713 25713 2 35459 22346 TTTGSYIANR AVQFDGGVVLGADSRTTTGSYIANRVTDKL GADSRTTTGSYIANRVTDKLTPIHDRIFCC R T T N R V 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 1 3 0 1 0 0 0 10 0 1082.5356 P28072 P28072 54 63 PSMB6 Proteasome subunit beta type-6 yes yes 2 0.00027001 167.23 By MS/MS 9.5 0.5 1 1 2 6934100 6934100 0 14364 714 15246 36435;36436 25714;25715 25714 2 4077600 0 TTTIAVEVK AVARIKKIYEEKKKKTTTIAVEVKKSQHKY EEKKKKTTTIAVEVKKSQHKYVIGPKGNSL K T T V K K 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 3 0 0 2 0 0 9 0 960.54916 Q00341 Q00341 295 303 HDLBP Vigilin yes yes 2 0.0053784 114.89 By MS/MS 3.5 0.5 1 1 2 2261400 2261400 0 14365 1231 15247 36437;36438 25716 25716 1 59302 0 TTTLSGTAPAAGVVPSR DLSRPKSTSTSSMKKTTTLSGTAPAAGVVP TLSGTAPAAGVVPSRVKATPMPSRPSTTPF K T T S R V 3 1 0 0 0 0 0 2 0 0 1 0 0 0 2 2 4 0 0 2 0 0 17 0 1584.8471 P27816 P27816 872 888 MAP4 Microtubule-associated protein 4 yes yes 2 0.00027027 164.48 By MS/MS 3 0 1 1 665500 665500 0 14366 710 15248 36439 25717 25717 1 17373 0 TTTSSGGLTISSLLK LREYAWKILSGNLPKTTTSSGGLTISSLLK TTTSSGGLTISSLLKEKEGSEVAKFTLEEL K T T L K E 0 0 0 0 0 0 0 2 0 1 3 1 0 0 0 4 4 0 0 0 0 0 15 0 1464.8035 Q5VIR6 Q5VIR6 520 534 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 3.003E-06 155.47 By MS/MS 4.5 0.5 1 1 2 602520 602520 0 14367 1645 15249 36440;36441 25718 25718 1 17094 0 TTTTLIEPIR GGSGPPEKKLSREEKTTTTLIEPIRLGGIS SREEKTTTTLIEPIRLGGISSTEEMDLKVL K T T I R L 0 1 0 0 0 0 1 0 0 2 1 0 0 0 1 0 4 0 0 0 0 0 10 0 1143.6499 O75150 O75150 28 37 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 2 0.0010157 122.13 By MS/MS 3 0 1 1 827250 827250 0 14368 283 15250 36442 25719 25719 1 21596 0 TTTVNIGSISTADGSALVK KENCRPDGRELGEFRTTTVNIGSISTADGS NIGSISTADGSALVKLGNTTVICGVKAEFA R T T V K L 2 0 1 1 0 0 0 2 0 2 1 1 0 0 0 3 4 0 0 2 0 0 19 0 1833.9684 Q96B26 Q96B26 34 52 EXOSC8 Exosome complex component RRP43 yes yes 2 6.3242E-15 190.18 By MS/MS 8 0 1 1 754410 754410 0 14369 2126 15251 36443 25720 25720 1 49768 0 TTVLAMDQVPR PAQNPELLNKLSQRKTTVLAMDQVPRVTIA SQRKTTVLAMDQVPRVTIAQGYDALSSMAN K T T P R V 1 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 2 0 0 2 0 0 11 0 1229.6438 Q13423 Q13423 172 182 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 9.3586E-07 179.1 By MS/MS 1 0 2 2 660960 660960 0 14370 1367 15252;15253 36444;36445 25721;25722 25721 1 32293 0 TTVSHNTKR LLDPNEKYLLRLLDKTTVSHNTKRFRFALP LRLLDKTTVSHNTKRFRFALPTAHHTLGLP K T T K R F 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 1 0 0 9 1 1042.552 Q9UHQ9 Q9UHQ9 55 63 CYB5R1 NADH-cytochrome b5 reductase 1 yes yes 2 0.034805 107.01 By MS/MS 8 0 1 1 80047 80047 0 14371 2781 15254 36446 25723 25723 1 5280.7 0 TTVVAQLK NLYSDDIPHALREKRTTVVAQLKQLQAETE HALREKRTTVVAQLKQLQAETEPIVKMFED R T T L K Q 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 8 0 858.51747 P60228 P60228 75 82 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00094683 173.68 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 35755000 35639000 115950 14372 1065 15255 36447;36448;36449;36450;36451;36452 25724;25725 25724 2 639140 355620 TTYLEFIQQNEER ______________________________ ______________________________ M T T E R D 0 1 1 0 0 2 3 0 0 1 1 0 0 1 0 0 2 0 1 0 0 0 13 0 1669.7948 Q15436 Q15436 2 14 SEC23A Protein transport protein Sec23A yes yes 2 8.7347E-19 230.95 By MS/MS 5 0 1 1 160500 160500 0 14373 1502 15256 36453 25726;25727 25727 2 6597.1 0 TTYLVLDEADR RLIDFLECGKTNLRRTTYLVLDEADRMLDM NLRRTTYLVLDEADRMLDMGFEPQIRKIVD R T T D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 2 0 1 1 0 0 11 0 1294.6405 P17844 P17844 242 252 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 2 0.041029 128.03 By MS/MS 5 0 1 1 1219400 1219400 0 14374 616 15257 36454 25728 25728 0 50123 0 TVAAELAIFR TDCNVLLGAPTGSGKTVAAELAIFRVFNKY TGSGKTVAAELAIFRVFNKYPTSKAVYIAP K T V F R V 3 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1089.6182 Q8N3C0 Q8N3C0 1356 1365 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.0045335 108.98 By MS/MS 1 0 1 1 56244 56244 0 14375 1908 15258 36455 25729 25729 1 2748 0 TVAATNMNETSSR YNDIQDLMDSGNKARTVAATNMNETSSRSH ARTVAATNMNETSSRSHAVFNIIFTQKRHD R T V S R S 2 1 2 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 1 0 0 13 0 1380.6303 Q12756;O43896;O60333 Q12756 204 216 KIF1A;KIF1C;KIF1B Kinesin-like protein KIF1A;Kinesin-like protein KIF1C;Kinesin-like protein KIF1B no no 2 1.1348E-34 257.09 By MS/MS 3 0.707 1 2 1 4 1041200 1041200 0 14376 1302;232;245 15259;15260 36456;36457;36458;36459 25730;25731 25730 136 2 37036 0 TVAELEAEK PTPKNIPQGAPVKQKTVAELEAEKAATITP APVKQKTVAELEAEKAATITPFRKTMSTAS K T V E K A 2 0 0 0 0 0 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 988.50769 Q13423 Q13423 454 462 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.018406 97.635 By MS/MS 1 0 1 1 585590 585590 0 14377 1367 15261 36460 25732 25732 1 28611 0 TVAEVQETLAEMIR ELFSEKHASLQNSQRTVAEVQETLAEMIRQ RTVAEVQETLAEMIRQHQKSQLCKSTANGP R T V I R Q 2 1 0 0 0 1 3 0 0 1 1 0 1 0 0 0 2 0 0 2 0 0 14 0 1588.8131 Q8TEQ6 Q8TEQ6 1373 1386 GEMIN5 Gem-associated protein 5 yes yes 2 0.0011421 120.77 By MS/MS 3 0 1 1 45288 45288 0 14378 2003 15262 36461 25733 25733 1 1182.3 0 TVAGIPNFILK YHSALKGGARSDQGKTVAGIPNFILKMYET DQGKTVAGIPNFILKMYETNKQPGLKPGLA K T V L K M 1 0 1 0 0 0 0 1 0 2 1 1 0 1 1 0 1 0 0 1 0 0 11 0 1171.6965 Q5VW36 Q5VW36 809 819 FOCAD Focadhesin yes yes 2 0.037008 80.165 By MS/MS 3.5 0.5 1 1 2 159900 159900 0 14379 1654 15263 36462;36463 25734 25734 1 4213.6 0 TVALDGTLFQK EDARRIAFGGHQRHKTVALDGTLFQKSGVI QRHKTVALDGTLFQKSGVISGGASDLKAKA K T V Q K S 1 0 0 1 0 1 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 11 0 1191.6499 Q14683 Q14683 638 648 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 6.7373E-07 183.72 By MS/MS 3.5 0.5 1 1 2 1973100 1973100 0 14380 1440 15264 36464;36465 25735 25735 1 51619 0 TVALWDLR NPYSEFILATGSADKTVALWDLRNLKLKLH ATGSADKTVALWDLRNLKLKLHSFESHKDE K T V L R N 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 1 1 0 1 0 0 8 0 972.53927 Q09028;Q16576 Q09028 297 304 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 0.0019783 157.58 By MS/MS 6.5 0.5 1 1 2 10015000 10015000 0 14381 1296;1541 15265 36466;36467 25736;25737 25736 2 78093 0 TVAQSQQLETNSQR DAGNSDRVVIQEMLKTVAQSQQLETNSQRD KTVAQSQQLETNSQRDFKVVLLTEVDKLTK K T V Q R D 1 1 1 0 0 4 1 0 0 0 1 0 0 0 0 2 2 0 0 1 0 0 14 0 1588.7805 P40938 P40938 114 127 RFC3 Replication factor C subunit 3 yes yes 2 6.2117E-104 350.25 By MS/MS 8 0.816 1 1 1 3 10352000 10352000 0 14382 834 15266 36468;36469;36470 25738 25738 1 216140 0 TVATFILQK PLCLRIMESGSELSKTVATFILQKILLDDT GSELSKTVATFILQKILLDDTGLAYICQTY K T V Q K I 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 0 0 1 0 0 9 0 1019.6015 Q92600 Q92600 180 188 RQCD1 Cell differentiation protein RCD1 homolog yes yes 2 0.0022182 127.46 By MS/MS 8 0 1 1 900920 900920 0 14383 2064 15267 36471 25739 25739 1 59433 0 TVATLSILGTR ALRTLVGICSEHQSRTVATLSILGTRRVVS HQSRTVATLSILGTRRVVSILGVESQAVSL R T V T R R 1 1 0 0 0 0 0 1 0 1 2 0 0 0 0 1 3 0 0 1 0 0 11 0 1130.6659 Q9H3U1 Q9H3U1 230 240 UNC45A Protein unc-45 homolog A yes yes 2 8.2416E-05 194.94 By MS/MS 6 1.41 1 1 1 1 1 5 2527900 2527900 0 14384 2493 15268 36472;36473;36474;36475;36476 25740 25740 1 69933 0 TVATPLNQVANPNSAIFGGAR EEERAQRPRLQLKPRTVATPLNQVANPNSA NQVANPNSAIFGGARPREEVVQKEQE____ R T V A R P 4 1 3 0 0 1 0 2 0 1 1 0 0 1 2 1 2 0 0 2 0 0 21 0 2097.0967 Q15056 Q15056 217 237 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 6.6847E-25 207.66 By MS/MS 8 0 1 1 847310 847310 0 14385 1474 15269 36477 25741 25741 1 55897 0 TVAVWDSETGER YNTDGSMLFSASTDKTVAVWDSETGERVKR TDKTVAVWDSETGERVKRLKGHTSFVNSCY K T V E R V 1 1 0 1 0 0 2 1 0 0 0 0 0 0 0 1 2 1 0 2 0 0 12 0 1348.6259 Q96DI7 Q96DI7 132 143 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 2 1.8055E-05 172.98 By MS/MS 7.5 0.5 1 1 2 2015300 2015300 0 14386 2152 15270 36478;36479 25742 25742 1 67899 0 TVDFTQDSNYLLTGGQDK SGDELMTLAHKHIVKTVDFTQDSNYLLTGG FTQDSNYLLTGGQDKLLRIYDLNKPEAEPK K T V D K L 0 0 1 3 0 2 0 2 0 0 2 1 0 1 0 1 3 0 1 1 0 0 18 0 2000.9327 Q9Y3F4 Q9Y3F4 105 122 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 1.1153E-68 289.72 By MS/MS 8.5 1.12 1 1 1 1 4 9531100 9531100 0 14387 2937 15271 36480;36481;36482;36483 25743;25744;25745 25744 3 363180 0 TVDLSSHLAK ASSEAPPLINEDVKRTVDLSSHLAKVTAEV EDVKRTVDLSSHLAKVTAEVVLAHLGGGST R T V A K V 1 0 0 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 1 0 0 10 0 1069.5768 P04843 P04843 39 48 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 2 0.0059958 104.2 By MS/MS 5 0 1 1 2986000 2986000 0 14388 458 15272 36484 25746 25746 1 122740 0 TVDNFVALATGEK VGRVIFGLFGKTVPKTVDNFVALATGEKGF PKTVDNFVALATGEKGFGYKNSKFHRVIKD K T V E K G 2 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1363.6983 P23284 P23284 72 84 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 9.4111E-12 240.8 By MS/MS 9.5 0.5 1 1 2 6682200 6682200 0 14389 667 15273 36485;36486 25747;25748 25747 2 3938000 0 TVEALYK RQIPYTMMKFACFERTVEALYKFVVPKPRS MKFACFERTVEALYKFVVPKPRSECSKPEQ R T V Y K F 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 7 0 822.44872 Q00325 Q00325 241 247 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.015644 138.37 By MS/MS By matching 5 3.02 1 1 1 1 2 1 6 1 15616000 15568000 47588 14390 1230 15274 36487;36488;36489;36490;36491;36492;36493 25749;25750;25751 25749 3 919710 405990 TVEDVFLR LHTGNLDGEDHAAERTVEDVFLRKFMWGTF EDHAAERTVEDVFLRKFMWGTFPGCLADQL R T V L R K 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 8 0 977.5182 Q96EL2 Q96EL2 86 93 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 0.0018492 159.2 By MS/MS By matching 10 0 2 1 1 4088700 4062600 26040 14391 2162 15275 36494;36495 25752 25752 1 4318100 667920 TVEDVFLRK LHTGNLDGEDHAAERTVEDVFLRKFMWGTF DHAAERTVEDVFLRKFMWGTFPGCLADQLV R T V R K F 0 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 9 1 1105.6132 Q96EL2 Q96EL2 86 94 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 2 0.0069244 132.08 By MS/MS By matching 10 0 2 1 1 1883400 1849500 33858 14392 2162 15276 36496;36497 25753 25753 1 1965800 868440 TVEELFVNCK GIGMHHAGLHERDRKTVEELFVNCKVQVLI ERDRKTVEELFVNCKVQVLIATSTLAWGVN K T V C K V 0 0 1 0 1 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1237.6013 Q8N3C0 Q8N3C0 1630 1639 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.0031126 113.62 By MS/MS 1 0 1 1 102660 102660 0 14393 1908 15277 36498 25754 25754 1 5016 0 TVELLSGVVDQTK TRYLNIFGESQPNPKTVELLSGVVDQTKDG PKTVELLSGVVDQTKDGLISFQEFVAFESV K T V T K D 0 0 0 1 0 1 1 1 0 0 2 1 0 0 0 1 2 0 0 3 0 0 13 0 1387.7559 Q9UJS0 Q9UJS0 57 69 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2;3 4.2897E-46 281.41 By MS/MS 4.71 2.43 1 1 3 1 1 7 39804000 39804000 0 14394 2798 15278 36499;36500;36501;36502;36503;36504;36505 25755;25756;25757;25758;25759;25760 25757 6 1724400 0 TVENFVALATGEK VGRIVIGLFGKVVPKTVENFVALATGEKGY PKTVENFVALATGEKGYGYKGSKFHRVIKD K T V E K G 2 0 1 0 0 0 2 1 0 0 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1377.714 P45877 P45877 66 78 PPIC Peptidyl-prolyl cis-trans isomerase C yes yes 2 1.4126E-05 171.67 By MS/MS 9 0 1 1 241590 241590 0 14395 869 15279 36506 25761 25761 1 138650 0 TVENIKDPLFR NWLHLIPQTLSHLKRTVENIKDPLFRFFER HLKRTVENIKDPLFRFFEREVKMGAKLLQD R T V F R F 0 1 1 1 0 0 1 0 0 1 1 1 0 1 1 0 1 0 0 1 0 0 11 1 1330.7245 Q14204 Q14204 4401 4411 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.00096254 157.78 By MS/MS 1 0 2 2 1999300 1999300 0 14396 1421 15280 36507;36508 25762;25763 25763 2 97682 0 TVEQTATTTNK TFADKEKKKEKKKAKTVEQTATTTNKKPGQ KKAKTVEQTATTTNKKPGQGTPNSANTQGN K T V N K K 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 5 0 0 1 0 0 11 0 1192.5935 P08579 P08579 112 122 SNRPB2 U2 small nuclear ribonucleoprotein B yes yes 2 5.646E-11 208.15 By MS/MS 8 0 1 1 1922600 1922600 0 14397 506 15281 36509 25764 25764 1 126830 0 TVESEAASYLDQISR NFGVSIQEETVAELRTVESEAASYLDQISR TVESEAASYLDQISRYYITRAKLVSKIAKY R T V S R Y 2 1 0 1 0 1 2 0 0 1 1 0 0 0 0 3 1 0 1 1 0 0 15 0 1667.8002 P61289 P61289 167 181 PSME3 Proteasome activator complex subunit 3 yes yes 2;3 4.3227E-38 313.52 By MS/MS 8.33 0.471 2 1 3 940710 940710 0 14398 1096 15282 36510;36511;36512 25765;25766 25765 2 82893 0 TVETLLLR DSANKFEENTYCFGRTVETLLLRFGKTIME NTYCFGRTVETLLLRFGKTIMEEQLVLKRV R T V L R F 0 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 1 0 0 8 0 943.57023 Q9H845 Q9H845 511 518 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2 0.0019783 157.58 By MS/MS 5.5 0.5 1 1 2 4366300 4366300 0 14399 2521 15283 36513;36514 25767 25767 1 37652 0 TVFFWAPIMK PEKLRPLYNHPAGPRTVFFWAPIMKWGLVC PAGPRTVFFWAPIMKWGLVCAGLADMARPA R T V M K W 1 0 0 0 0 0 0 0 0 1 0 1 1 2 1 0 1 1 0 1 0 0 10 0 1238.6522 O95563 O95563 40 49 MPC2 Mitochondrial pyruvate carrier 2 yes yes 2 0.0094064 96.711 By MS/MS 10 0 1 1 75329 75329 0 14400 398 15284 36515 25768 25768 210 1 80067 0 TVFLSGLPPPPAEPEPEPEPEPEPALDLAALR TFALNADRWYQYFTKTVFLSGLPPPPAEPE PEPEPEPALDLAALRAVACDCLLQEHFYLR K T V L R A 4 1 0 1 0 0 6 1 0 0 5 0 0 1 10 1 1 0 0 1 0 0 32 0 3374.7286 Q9NP92 Q9NP92 112 143 MRPS30 28S ribosomal protein S30, mitochondrial yes yes 3 6.3404E-08 86.48 By MS/MS 6 0 1 1 1354600 1354600 0 14401 2578 15285 36516 25769 25769 1 10564 0 TVFSPTLPAAR KSLTSWTNDQGARRKTVFSPTLPAARSSLG ARRKTVFSPTLPAARSSLGSLQTPEAVTTR K T V A R S 2 1 0 0 0 0 0 0 0 0 1 0 0 1 2 1 2 0 0 1 0 0 11 0 1158.6397 Q7Z2W4 Q7Z2W4 375 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 0.02823 74.165 By MS/MS 4.5 0.5 1 1 2 5122400 5122400 0 14402 1777 15286 36517;36518 25770 25770 1 154990 0 TVFVSERELDWAK FLGRVKHFLNITDPRTVFVSERELDWAKVM PRTVFVSERELDWAKVMVEKSRMGVVPPGT R T V A K V 1 1 0 1 0 0 2 0 0 0 1 1 0 1 0 1 1 1 0 2 0 0 13 1 1578.8042 Q96NB2 Q96NB2 35 47 SFXN2 Sideroflexin-2 yes yes 2 0.031459 121.68 By MS/MS 8 0 1 1 1289200 1289200 0 14403 2231 15287 36519 25771 25771 1 85046 0 TVGALQVLGTEAQSSLLK LLAALECYNTFIGERTVGALQVLGTEAQSS ALQVLGTEAQSSLLKAVAFFLESIAMHDII R T V L K A 2 0 0 0 0 2 1 2 0 0 4 1 0 0 0 2 2 0 0 2 0 0 18 0 1814.0149 P78527 P78527 1275 1292 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.2506E-55 278.36 By MS/MS 2.5 1.12 1 1 1 1 4 1254200 1254200 0 14404 1197 15288 36520;36521;36522;36523 25772;25773;25774 25774 3 52592 0 TVGATALPR LVRLNSKWDLRRLCKTVGATALPRLTPPVL LRRLCKTVGATALPRLTPPVLEEMGHCDSV K T V P R L 2 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 2 0 0 1 0 0 9 0 884.50797 P50990 P50990 327 335 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00019349 164.53 By MS/MS 6.57 2.77 1 1 1 1 1 1 1 7 231570000 231570000 0 14405 955 15289 36524;36525;36526;36527;36528;36529;36530 25775;25776;25777;25778;25779 25776 5 2650400 0 TVGLQSR LDKPSPETFVKSAIKTVGLQSRTNGYLIHA TFVKSAIKTVGLQSRTNGYLIHALMGSIIS K T V S R T 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 7 0 759.4239 Q53GQ0 Q53GQ0 262 268 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 2 0.044208 105.14 By MS/MS 8.5 0.5 1 1 2 25054000 25054000 0 14406 1584 15290 36531;36532 25780 25780 1 1927600 0 TVGTPIASVPGSTNTGTVPGSEK SASQQFLSSVIQNLRTVGTPIASVPGSTNT VPGSTNTGTVPGSEKDSDSMETEEKTSSAF R T V E K D 1 0 1 0 0 0 1 4 0 1 0 1 0 0 3 3 5 0 0 3 0 0 23 0 2156.0961 Q99460 Q99460 270 292 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 4.6349E-08 135.55 By MS/MS 4 0 1 1 2953800 2953800 0 14407 2268 15291 36533 25781 25781 1 80636 0 TVGVEPAADGK KARNSFRYNGLIHRKTVGVEPAADGKGVVV IHRKTVGVEPAADGKGVVVVIKRRSGQRKP K T V G K G 2 0 0 1 0 0 1 2 0 0 0 1 0 0 1 0 1 0 0 2 0 0 11 0 1042.5295 P46779 P46779 48 58 RPL28 60S ribosomal protein L28 yes yes 2 0.0064501 101.65 By MS/MS By matching 9.33 0.471 2 1 2 1 739050 704020 35034 14408 886 15292 36534;36535;36536 25782 25782 1 462630 377570 TVGVNNPVFLLDEVDK TYVGSMPGRIINGLKTVGVNNPVFLLDEVD VGVNNPVFLLDEVDKLGKSLQGDPAAALLE K T V D K L 0 0 2 2 0 0 1 1 0 0 2 1 0 1 1 0 1 0 0 4 0 0 16 0 1757.92 Q86WA8 Q86WA8 431 446 LONP2 Lon protease homolog 2, peroxisomal yes yes 2 0.007456 98.582 By MS/MS 4 0 1 1 165510 165510 0 14409 1836 15293 36537 25783 25783 1 4518.3 0 TVHNLYLFDR ______________________________ ______________________________ M T V D R N 0 1 1 1 0 0 0 0 1 0 2 0 0 1 0 0 1 0 1 1 0 0 10 0 1276.6564 Q9Y5R8 Q9Y5R8 2 11 TRAPPC1 Trafficking protein particle complex subunit 1 yes yes 2 0.029827 87.568 By MS/MS 10 0 1 1 173580 173580 0 14410 2979 15294 36538 25784 25784 1 184490 0 TVIEPMASEGLR EAKVFRPRDRDDIVKTVIEPMASEGLRTIC IVKTVIEPMASEGLRTICLAFRDFPAGEPE K T V L R T 1 1 0 0 0 0 2 1 0 1 1 0 1 0 1 1 1 0 0 1 0 0 12 0 1301.6649 P20020 P20020 635 646 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 2 0.019484 81.017 By MS/MS 1.5 0.5 1 1 2 322200 322200 0 14411 637 15295 36539;36540 25785 25785 430 1 15853 0 TVIESSPESPVTITEPYR ASGSNNAVIYVHNLKTVIESSPESPVTITE ESSPESPVTITEPYRTLSGHTAKITSVAWS K T V Y R T 0 1 0 0 0 0 3 0 0 2 0 0 0 0 3 3 3 0 1 2 0 0 18 0 2004.0052 Q8TEQ6 Q8TEQ6 616 633 GEMIN5 Gem-associated protein 5 yes yes 2 6.4462E-14 182.37 By MS/MS 2 0.816 1 1 1 3 3877300 3877300 0 14412 2003 15296 36541;36542;36543 25786 25786 1 104910 0 TVIGELPPASSGSALAANVCK SDKEQLRDISSIGLKTVIGELPPASSGSAL PPASSGSALAANVCKKITGRLTSAIAKQED K T V C K K 4 0 1 0 1 0 1 2 0 1 2 1 0 0 2 3 1 0 0 2 0 0 21 0 2041.0514 Q86VP6 Q86VP6 112 132 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 9.5464E-19 183.28 By MS/MS 3.5 0.5 1 1 2 1128600 1128600 0 14413 1829 15297 36544;36545 25787;25788 25787 2 30186 0 TVIGSVLLR LKEGSTAQLIINTEKTVIGSVLLRELKPVL IINTEKTVIGSVLLRELKPVLSQG______ K T V L R E 0 1 0 0 0 0 0 1 0 1 2 0 0 0 0 1 1 0 0 2 0 0 9 0 956.60187 O00203 O00203 1077 1085 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0028304 120.87 By MS/MS 4 0 1 1 405270 405270 0 14414 77 15298 36546 25789 25789 1 11063 0 TVIIEQSWGSPK LLADAVAVTMGPKGRTVIIEQSWGSPKVTK KGRTVIIEQSWGSPKVTKDGVTVAKSIDLK R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 8.285E-24 257.09 By MS/MS By MS/MS 5.55 2.74 1 1 1 1 1 2 1 1 1 1 10 1 354890000 353730000 1158200 14415 544 15299 36547;36548;36549;36550;36551;36552;36553;36554;36555;36556;36557 25790;25791;25792;25793;25794;25795;25796;25797;25798 25793 9 5417300 3552200 TVIKEGEEQLQTQHQK RNLTYSAPLYVDITKTVIKEGEEQLQTQHQ VIKEGEEQLQTQHQKTFIGKIPIMLRSTYC K T V Q K T 0 0 0 0 0 4 3 1 1 1 1 2 0 0 0 0 2 0 0 1 0 0 16 1 1894.9749 P30876 P30876 131 146 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 0.0014568 114.54 By MS/MS 3.5 0.5 1 1 2 4291900 4291900 0 14416 748 15300 36558;36559 25799 25799 1 112530 0 TVIKKDEQEHEFYK NRYIVLAKDFEKAYKTVIKKDEQEHEFYK_ KTVIKKDEQEHEFYK_______________ K T V Y K - 0 0 0 1 0 1 3 0 1 1 0 3 0 1 0 0 1 0 1 1 0 0 14 2 1792.8996 P43686 P43686 405 418 PSMC4 26S protease regulatory subunit 6B yes yes 3 0.0023869 110.44 By MS/MS 7 0.816 1 1 1 3 8192900 8192900 0 14417 867 15301 36560;36561;36562 25800 25800 1 83110 0 TVIQEALALDR WIREPWEELFSIGLRTVIQEALALDR____ IGLRTVIQEALALDR_______________ R T V D R - 2 1 0 1 0 1 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 11 0 1227.6823 Q8N1F8 Q8N1F8 1078 1088 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.00051625 142.08 By MS/MS 3.5 0.5 1 1 2 2927300 2927300 0 14418 1899 15302 36563;36564 25801;25802;25803 25801 3 76418 0 TVISPDPNLR FRGNLSGKRVDFSGRTVISPDPNLRIDEVA DFSGRTVISPDPNLRIDEVAVPVHVAKILT R T V L R I 0 1 1 1 0 0 0 0 0 1 1 0 0 0 2 1 1 0 0 1 0 0 10 0 1110.6033 O14802 O14802 367 376 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.024787 89.029 By MS/MS 3 0 1 1 438000 438000 0 14419 128 15303 36565 25804 25804 1 11434 0 TVITPDPNLSIDQVGVPR VRGNLMGKRVDFSARTVITPDPNLSIDQVG TPDPNLSIDQVGVPRSIAANMTFAEIVTPF R T V P R S 0 1 1 2 0 1 0 1 0 2 1 0 0 0 3 1 2 0 0 3 0 0 18 0 1920.0316 P24928 P24928 365 382 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 7.0835E-07 157.86 By MS/MS 2.5 0.5 1 1 2 749340 749340 0 14420 681 15304 36566;36567 25805 25805 1 30504 0 TVIVHGFTLGEK SLLTSVAARKRAPYKTVIVHGFTLGEKGEK PYKTVIVHGFTLGEKGEKMSKSLGNVIHPD K T V E K G 0 0 0 0 0 0 1 2 1 1 1 1 0 1 0 0 2 0 0 2 0 0 12 0 1299.7187 Q9NSE4 Q9NSE4 650 661 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 0.0016402 126.03 By MS/MS 3.5 0.5 1 1 2 4787800 4787800 0 14421 2624 15305 36568;36569 25806 25806 1 130300 0 TVIVTGANTGIGK VTGGACPSKATIPGKTVIVTGANTGIGKQT GKTVIVTGANTGIGKQTALELARRGGNIIL K T V G K Q 1 0 1 0 0 0 0 3 0 2 0 1 0 0 0 0 3 0 0 2 0 0 13 0 1229.698 Q8NBN7 Q8NBN7 40 52 RDH13 Retinol dehydrogenase 13 yes yes 2 9.7093E-18 223.77 By MS/MS 8 0 1 1 3016500 3016500 0 14422 1943 15306 36570 25807 25807 1 199000 0 TVIVTPSQR LARTDPKDVARVESKTVIVTPSQRDTVPLP ARVESKTVIVTPSQRDTVPLPPGGARGQLG K T V Q R D 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 1 2 0 0 2 0 0 9 0 999.57129 Q16822 Q16822 109 117 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.051439 78.334 By MS/MS By matching 5.33 0.471 2 1 2 1 6887300 6875000 12306 14423 1550 15307 36571;36572;36573 25808 25808 1 156600 36412 TVKPLSLFDSK ILCSILYAVMRFSLKTVKPLSLFDSKGKNA FSLKTVKPLSLFDSKGKNAFFKDLTSIQLL K T V S K G 0 0 0 1 0 0 0 0 0 0 2 2 0 1 1 2 1 0 0 1 0 0 11 1 1233.6969 Q9H2M9 Q9H2M9 1175 1185 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 3 0.0028604 102.4 By MS/MS 3 0 1 1 413680 413680 0 14424 2481 15308 36574 25809 25809 1 10799 0 TVKQPVYVVDVSK MHRFGPIPLGSLGWKTVKQPVYVVDVSKGI WKTVKQPVYVVDVSKGIVNAVKDPDANGKS K T V S K G 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 1 1 0 1 5 0 0 13 1 1460.8239 Q16795 Q16795 235 247 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 2 0.03619 103.97 By MS/MS 8 0 1 1 1459600 1459600 0 14425 1548 15309 36575 25810 25810 1 96289 0 TVLDPVTGDLSDTR FLYLNIGLQNGVLLRTVLDPVTGDLSDTRT RTVLDPVTGDLSDTRTRYLGSRPVKLFRVR R T V T R T 0 1 0 3 0 0 0 1 0 0 2 0 0 0 1 1 3 0 0 2 0 0 14 0 1487.7468 Q15393 Q15393 677 690 SF3B3 Splicing factor 3B subunit 3 yes yes 2 6.7432E-17 194.39 By MS/MS By matching 3.17 1.34 1 1 1 2 1 5 1 3938900 3868000 70829 14426 1498 15310 36576;36577;36578;36579;36580;36581 25811;25812;25813;25814 25813 4 161190 148000 TVLDQQQTPSR QVRRDYLKEAVTTLKTVLDQQQTPSRLAVT TTLKTVLDQQQTPSRLAVTRVIQALAMKGD K T V S R L 0 1 0 1 0 3 0 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 11 0 1271.647 P42704 P42704 1129 1139 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 1.3923E-10 220.82 By MS/MS By MS/MS 4.5 2.18 1 5 2 1 1 1 1 10 2 122290000 121930000 351090 14427 854 15311 36582;36583;36584;36585;36586;36587;36588;36589;36590;36591;36592;36593 25815;25816;25817;25818;25819;25820;25821;25822 25816 8 3404800 503190 TVLEHYALEDDPLAAFK AFLKTIALNGVEDVRTVLEHYALEDDPLAA LEHYALEDDPLAAFKQRQSRLEQEEQQRLA R T V F K Q 3 0 0 2 0 0 2 0 1 0 3 1 0 1 1 0 1 0 1 1 0 0 17 0 1930.9676 Q3ZCQ8 Q3ZCQ8 296 312 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 1.3043E-10 208.08 By MS/MS 7.5 0.5 2 2 4 1896900 1896900 0 14428 1573 15312 36594;36595;36596;36597 25823;25824;25825;25826 25824 4 62473 0 TVLEQVLPI EFEVIFPERIPQTSRTVLEQVLPI______ IPQTSRTVLEQVLPI_______________ R T V P I - 0 0 0 0 0 1 1 0 0 1 2 0 0 0 1 0 1 0 0 2 0 0 9 0 1010.6012 P25685 P25685 332 340 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 2 0.020429 96.492 By MS/MS 8 0.816 1 1 1 3 3311100 3311100 0 14429 686 15313 36598;36599;36600 25827;25828 25827 2 120880 0 TVLGTPEVLLGALPGAGGTQR VAISCQYRIATKDRKTVLGTPEVLLGALPG EVLLGALPGAGGTQRLPKMVGVPAALDMML K T V Q R L 2 1 0 0 0 1 1 5 0 0 4 0 0 0 2 0 3 0 0 2 0 0 21 0 2006.116 P40939 P40939 167 187 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2;3 0.00034134 108.66 By MS/MS 5.5 0.5 2 2 4 2073500 2073500 0 14430 835 15314 36601;36602;36603;36604 25829;25830;25831 25831 3 28573 0 TVLIACNVK CLPGKKGGYTSGTFRTVLIACNVKQMSKDA TSGTFRTVLIACNVKQMSKDAQPSFSAEDI R T V V K Q 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 9 0 1016.5689 P25205 P25205 258 266 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.011002 119.41 By MS/MS 4 0 1 1 4004000 4004000 0 14431 683 15315 36605 25832;25833 25832 2 109310 0 TVLIHCPEKISENK RFSEMQNERREQAQRTVLIHCPEKISENKF RTVLIHCPEKISENKFLKYLSQFGPINNHF R T V N K F 0 0 1 0 1 0 2 0 1 2 1 2 0 0 1 1 1 0 0 1 0 0 14 1 1666.8712 Q9NVV4 Q9NVV4 77 90 MTPAP Poly(A) RNA polymerase, mitochondrial yes yes 3 0.0087818 82.069 By MS/MS 6 0 1 1 1286000 1286000 0 14432 2663 15316 36606 25834 25834 1 10028 0 TVLIMELINNVAK KGGKIGLFGGAGVGKTVLIMELINNVAKAH GKTVLIMELINNVAKAHGGYSVFAGVGERT K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 P06576 P06576 213 225 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 5.0667E-35 261.87 By MS/MS 6.22 0.786 1 6 1 1 9 74753000 74753000 0 14433 478 15317;15318 36607;36608;36609;36610;36611;36612;36613;36614;36615 25835;25836;25837;25838;25839;25840;25841;25842;25843;25844;25845 25835 272 10 606240 0 TVLITGANSGLGR QRLRRGGDPGLMHGKTVLITGANSGLGRAT GKTVLITGANSGLGRATAAELLRLGARVIM K T V G R A 1 1 1 0 0 0 0 3 0 1 2 0 0 0 0 1 2 0 0 1 0 0 13 0 1257.7041 Q9HBH5 Q9HBH5 45 57 RDH14 Retinol dehydrogenase 14 yes yes 2 1.2395E-11 199.8 By MS/MS By matching 8 0 2 1 1 6505900 6484300 21611 14434 2552 15319 36616;36617 25846 25846 1 427770 184370 TVLNQILR PPDTQKFLRFAETHRTVLNQILRQSTTHLA RFAETHRTVLNQILRQSTTHLADGPFAVLV R T V L R Q 0 1 1 0 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 8 0 955.58147 Q7Z6Z7 Q7Z6Z7 3964 3971 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0090006 122.18 By MS/MS 1 0 1 1 448520 448520 0 14435 1803 15320 36618 25847 25847 1 21914 0 TVLPFSQEFQR LPNYCYNGSTNRFVRTVLPFSQEFQRDKQP RFVRTVLPFSQEFQRDKQPNAQPQYLHGSK R T V Q R D 0 1 0 0 0 2 1 0 0 0 1 0 0 2 1 1 1 0 0 1 0 0 11 0 1350.6932 Q7L576 Q7L576 867 877 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 0.023509 86.189 By MS/MS 3 0 1 1 890270 890270 0 14436 1765 15321 36619 25848 25848 1 23241 0 TVLQIDDNVTSAVEGINR YEALEKYPMAYVDYKTVLQIDDNVTSAVEG QIDDNVTSAVEGINRMTRALMDSLGPEWRL K T V N R M 1 1 2 2 0 1 1 1 0 2 1 0 0 0 0 1 2 0 0 3 0 0 18 0 1942.996 Q15785 Q15785 110 127 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 1.9815E-44 269.05 By MS/MS 8 0 1 1 647500 647500 0 14437 1521 15322 36620 25849 25849 1 42715 0 TVLQQVIEDGSK QRTVNFKINRELLTKTVLQQVIEDGSKYGL LTKTVLQQVIEDGSKYGLKSELFSGLPQKK K T V S K Y 0 0 0 1 0 2 1 1 0 1 1 1 0 0 0 1 1 0 0 2 0 0 12 0 1315.6983 Q5T160 Q5T160 100 111 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 3.4707E-07 185.3 By MS/MS 6 0.816 1 1 1 3 10834000 10834000 0 14438 1624 15323 36621;36622;36623 25850 25850 1 89220 0 TVLQQVIEDGSKYGLK QRTVNFKINRELLTKTVLQQVIEDGSKYGL VLQQVIEDGSKYGLKSELFSGLPQKKIVVE K T V L K S 0 0 0 1 0 2 1 2 0 1 2 2 0 0 0 1 1 0 1 2 0 0 16 1 1776.9622 Q5T160 Q5T160 100 115 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 3 0.030226 62.077 By MS/MS 6 0 1 1 1733800 1733800 0 14439 1624 15324 36624 25851 25851 1 13520 0 TVLSSHK LGGFKLAHGLLEELKTVLSSHKVLPLEALV HGLLEELKTVLSSHKVLPLEALVTDAGEVT K T V H K V 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 7 0 770.42865 Q92616 Q92616 610 616 GCN1L1 Translational activator GCN1 yes yes 2 0.035671 111.04 By MS/MS 2 0.816 1 1 1 3 1305000 1305000 0 14440 2068 15325 36625;36626;36627 25852 25852 1 59207 0 TVLTAADVLPDGPFPQDEK DVMLKGLFKVLEDSRTVLTAADVLPDGPFP AADVLPDGPFPQDEKLKDAFSHVVENTAFF R T V E K L 2 0 0 3 0 1 1 1 0 0 2 1 0 1 3 0 2 0 0 2 0 0 19 0 2012.0102 Q9H6E4 Q9H6E4 82 100 CCDC134 Coiled-coil domain-containing protein 134 yes yes 2 0.0010854 110.77 By MS/MS 8 0 1 1 451960 451960 0 14441 2509 15326 36628 25853 25853 1 29816 0 TVMDEGPQVFAPLSEESK DISTEDGDRLYSLCKTVMDEGPQVFAPLSE DEGPQVFAPLSEESKNKKYQEEVPVYVPKW K T V S K N 1 0 0 1 0 1 3 1 0 0 1 1 1 1 2 2 1 0 0 2 0 0 18 0 1962.9245 O43264 O43264 688 705 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 4.6111E-19 209.22 By MS/MS 4.5 0.5 1 1 2 1182300 1182300 0 14442 189 15327 36629;36630 25854 25854 1 33579 0 TVMVQEGNVESAYR ______________________________ RTVMVQEGNVESAYRTLNRILTMDGLIEDI R T V Y R T 1 1 1 0 0 1 2 1 0 0 0 0 1 0 0 1 1 0 1 3 0 0 14 0 1581.7457 P82921 P82921 11 24 MRPS21 28S ribosomal protein S21, mitochondrial yes yes 2 6.7303E-18 218.02 By MS/MS By matching 10 0 3 2 1 1197500 1175700 21832 14443 1208 15328;15329 36631;36632;36633 25855;25856;25857 25857 993 3 1249600 559990 TVNELQNLTAAEVVVPR VPASAAGRVIGKGGKTVNELQNLTAAEVVV NELQNLTAAEVVVPRDQTPDENDQVIVKII K T V P R D 2 1 2 0 0 1 2 0 0 0 2 0 0 0 1 0 2 0 0 4 0 0 17 0 1852.0054 Q9NZI8 Q9NZI8 509 525 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2;3 3.255E-43 286.74 By MS/MS 5.33 0.471 2 1 3 3825600 3825600 0 14444 2711 15330 36634;36635;36636 25858;25859 25858 2 127360 0 TVPILFASTVR LKVKAKVRQCLQERRTVPILFASTVRRHPD QERRTVPILFASTVRRHPDKTALIFEGTDT R T V V R R 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 2 0 0 2 0 0 11 0 1202.7023 Q6P1M0 Q6P1M0 75 85 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.0056045 105.2 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 1438900 1438900 0 14445 1701 15331 36637;36638;36639;36640;36641;36642 25860;25861;25862 25860 3 46725 0 TVPQSSLTMGQLYEK IQLPSEKAIFLFVDKTVPQSSLTMGQLYEK TVPQSSLTMGQLYEKEKDEDGFLYVAYSGE K T V E K E 0 0 0 0 0 2 1 1 0 0 2 1 1 0 1 2 2 0 1 1 0 0 15 0 1680.8393 P60520 P60520 83 97 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 2 0.029523 69.864 By MS/MS 10 0 1 1 152720 152720 0 14446 1068 15332 36643 25863;25864 25864 831 2 162330 0 TVQAGLGQADALTR REAGPDARRCWRFWRTVQAGLGQADALTRK RTVQAGLGQADALTRKRARYLLQRAVEVSA R T V T R K 3 1 0 1 0 2 0 2 0 0 2 0 0 0 0 0 2 0 0 1 0 0 14 0 1399.7419 Q13395 Q13395 268 281 TARBP1 Probable methyltransferase TARBP1 yes yes 2 0.00058274 131.35 By MS/MS 2.67 1.25 1 1 1 3 1743900 1743900 0 14447 1362 15333 36644;36645;36646 25865;25866 25866 2 51683 0 TVQAIVELK RTKMVRTINLYYNNRTVQAIVELKNKPARW LYYNNRTVQAIVELKNKPARWHKAKKVQLT R T V L K N 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 9 0 999.59645 Q5T4S7 Q5T4S7 3598 3606 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2 0.0077751 109.66 By MS/MS 1.5 0.5 1 1 2 173060 173060 0 14448 1627 15334 36647;36648 25867 25867 1 8505.7 0 TVQDALESLVAR PFFTLQLDIQSDKIRTVQDALESLVARESV KIRTVQDALESLVARESVQGYTTKTKQEVE R T V A R E 2 1 0 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 12 0 1300.6987 Q14694 Q14694 642 653 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 2 2.5279E-11 209.19 By MS/MS 3.5 0.5 1 1 2 671670 671670 0 14449 1442 15335 36649;36650 25868 25868 1 18304 0 TVQGPPTSDDIFER VHSSVASATSVATKKTVQGPPTSDDIFERE KTVQGPPTSDDIFEREYKYGAHNYHPLPVA K T V E R E 0 1 0 2 0 1 1 1 0 1 0 0 0 1 2 1 2 0 0 1 0 0 14 0 1560.742 P04181 P04181 33 46 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 5.7357E-12 198.74 By MS/MS 7 0 1 1 3185900 3185900 0 14450 447 15336 36651 25869 25869 1 56932 0 TVQIEASTVEIEER YPERVIPGAAEKIERTVQIEASTVEIEERG RTVQIEASTVEIEERGVKLRLTVVDTPGYG R T V E R G 1 1 0 0 0 1 4 0 0 2 0 0 0 0 0 1 2 0 0 2 0 0 14 0 1602.8101 Q15019 Q15019 78 91 SEPT2 Septin-2 yes yes 2 2.9093E-12 206.46 By MS/MS 6 0.816 1 1 1 3 5848000 5848000 0 14451 1462 15337 36652;36653;36654 25870;25871 25870 2 93250 0 TVQLTSSELESTLETLK DAHLLVESKNLDFQKTVQLTSSELESTLET QLTSSELESTLETLKAENQPIRDVLKQLIL K T V L K A 0 0 0 0 0 1 3 0 0 0 4 1 0 0 0 3 4 0 0 1 0 0 17 0 1877.9834 P42704 P42704 656 672 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 1.4537E-202 439.61 By MS/MS 3.75 0.829 2 1 1 4 4693300 4693300 0 14452 854 15338 36655;36656;36657;36658 25872;25873;25874;25875 25875 4 124750 0 TVQSNSPISALAPTGK ENKQFKEEDGLRMRKTVQSNSPISALAPTG VQSNSPISALAPTGKEEGLSTRLLALVVLF K T V G K E 2 0 1 0 0 1 0 1 0 1 1 1 0 0 2 3 2 0 0 1 0 0 16 0 1569.8362 O95292 O95292 201 216 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 2.3548E-10 232.13 By MS/MS 8.5 0.5 1 1 2 2189500 2189500 0 14453 381 15339 36659;36660 25876 25876 1 209000 0 TVQTDHNAVQR NDKNIRYVALTSLLKTVQTDHNAVQRHRST SLLKTVQTDHNAVQRHRSTIVDCLKDLDVS K T V Q R H 1 1 1 1 0 2 0 0 1 0 0 0 0 0 0 0 2 0 0 2 0 0 11 0 1267.6269 O43747 O43747 335 345 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.0039533 107.55 By MS/MS 4 0 1 1 0 0 0 14454 219 15340 36661 25877 25877 1 0 0 TVSDLIDQK VIPEVIKNFIQYFHKTVSDLIDQKVYELQA IQYFHKTVSDLIDQKVYELQASRVSSDVID K T V Q K V 0 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 1017.5342 Q9Y262 Q9Y262 62 70 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.0025995 123.35 By MS/MS 5.5 0.5 1 1 2 16106000 16106000 0 14455 2868 15341 36662;36663 25878;25879 25878 2 295860 0 TVSDLIDQKVYELQASR VIPEVIKNFIQYFHKTVSDLIDQKVYELQA SDLIDQKVYELQASRVSSDVIDQKVYEIQD K T V S R V 1 1 0 2 0 2 1 0 0 1 2 1 0 0 0 2 1 0 1 2 0 0 17 1 1964.0215 Q9Y262 Q9Y262 62 78 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 3 0.0039954 94.922 By MS/MS 5.5 0.5 1 1 2 2668700 2668700 0 14456 2868 15342 36664;36665 25880 25880 1 27644 0 TVSFEALPIMR SLTFNAINRYTNTSKTVSFEALPIMRNEPS NTSKTVSFEALPIMRNEPSSYCSFNNIGGE K T V M R N 1 1 0 0 0 0 1 0 0 1 1 0 1 1 1 1 1 0 0 1 0 0 11 0 1262.6693 O15084 O15084 1009 1019 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.0028142 111.46 By MS/MS 3.5 0.5 1 1 2 464810 464810 0 14457 147 15343 36666;36667 25881 25881 92 1 12515 0 TVSKVDDFLANEAK LNMNDHGFVVCAFNRTVSKVDDFLANEAKG RTVSKVDDFLANEAKGTKVVGAQSLKEMVS R T V A K G 2 0 1 2 0 0 1 0 0 0 1 2 0 1 0 1 1 0 0 2 0 0 14 1 1535.7831 P52209 P52209 35 48 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2;3 0.00063765 149.82 By MS/MS 6.5 0.5 2 2 4 17301000 17301000 0 14458 981 15344 36668;36669;36670;36671 25882;25883;25884 25882 3 195630 0 TVSLLDENNVSSYLSK SRSQGCSEQVLTVLKTVSLLDENNVSSYLS VSLLDENNVSSYLSKNILAFRDQNILLGTT K T V S K N 0 0 2 1 0 0 1 0 0 0 3 1 0 0 0 4 1 0 1 2 0 0 16 0 1767.8891 P78527 P78527 3303 3318 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 1.2398E-63 302.63 By MS/MS 3 1.41 1 1 1 1 1 5 4356000 4356000 0 14459 1197 15345 36672;36673;36674;36675;36676 25885;25886;25887;25888;25889 25888 5 147000 0 TVSPDRLELEAAQK ______________________________ KTVSPDRLELEAAQKFLERAAVENLPTFLV K T V Q K F 2 1 0 1 0 1 2 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 14 1 1555.8206 Q14974 Q14974 10 23 KPNB1 Importin subunit beta-1 yes yes 2 6.9116E-05 168.98 By MS/MS 5 0.816 1 1 1 3 2649000 2649000 0 14460 1452 15346 36677;36678;36679 25890 25890 1 62928 0 TVTAAGAENIQQK QATQGNISSDRGKKRTVTAAGAENIQQKTD KRTVTAAGAENIQQKTDEKVDESGPPAPSK R T V Q K T 3 0 1 0 0 2 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 13 0 1329.6888 Q29RF7 Q29RF7 1240 1252 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 7.5353E-08 189.17 By MS/MS By matching 3 0 2 1 1 869810 857080 12725 14461 1556 15347 36680;36681 25891 25891 1 22374 18237 TVTAEVQPQCGR DFDGGNFYFTELDAKTVTAEVQPQCGRAVG DAKTVTAEVQPQCGRAVGFSSGTENPHGVK K T V G R A 1 1 0 0 1 2 1 1 0 0 0 0 0 0 1 0 2 0 0 2 0 0 12 0 1344.6456 Q32P28 Q32P28 636 647 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 2 0.00055222 157.75 By MS/MS 4.5 0.5 1 1 2 834330 834330 0 14462 1565 15348 36682;36683 25892 25892 1 32107 0 TVTAMDVVYALK VIRDAVTYTEHAKRKTVTAMDVVYALKRQG KRKTVTAMDVVYALKRQGRTLYGFGG____ K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.00028005 142.83 By MS/MS 9.5 0.5 1 1 2 440830 440830 0 14463 1144 15349 36684;36685 25893 25893 893 1 374550 0 TVTDMLMTICAR MLDGTVKTIMVDDSKTVTDMLMTICARIGI DSKTVTDMLMTICARIGITNHDEYSLVREL K T V A R I 1 1 0 1 1 0 0 0 0 1 1 0 2 0 0 0 3 0 0 1 0 0 12 0 1410.6669 Q9Y490 Q9Y490 107 118 TLN1 Talin-1 yes yes 2 0.0010892 108.47 By MS/MS 2 0 1 1 273850 273850 0 14464 2947 15350 36686 25894 25894 1695;1696 1 13612 0 TVTEYKIDEDGKK APLPPPKEVINGNIKTVTEYKIDEDGKKFK IKTVTEYKIDEDGKKFKIVRTFRIETRKAS K T V K K F 0 0 0 2 0 0 2 1 0 1 0 3 0 0 0 0 2 0 1 1 0 0 13 2 1524.7672 O75821 O75821 66 78 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2;3 2E-24 241.39 By MS/MS By matching 7 0 3 2 1 18554000 18502000 51710 14465 330 15351 36687;36688;36689 25895;25896 25896 2 330640 212280 TVTIKVPQK RELGEDGLKAYTEVKTVTIKVPQKNS____ AYTEVKTVTIKVPQKNS_____________ K T V Q K N 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 2 0 0 2 0 0 9 1 1012.6281 P30837 P30837 507 515 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.049707 111.95 By MS/MS 6 0 1 1 3748600 3748600 0 14466 747 15352 36690 25897 25897 1 29232 0 TVTIVVR SGKLLKITGCASPGKTVTIVVRGSNKLVIE TGCASPGKTVTIVVRGSNKLVIEEAERSIH K T V V R G 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 3 0 0 7 0 786.49634 P50991 P50991 385 391 CCT4 T-complex protein 1 subunit delta yes yes 2 0.018309 131.04 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 71726000 71667000 58713 14467 956 15353 36691;36692;36693;36694;36695;36696 25898 25898 1 1147600 180070 TVTLGGDVFDPHGTLSGGAR DNAKKVAFDKRIMTRTVTLGGDVFDPHGTL GDVFDPHGTLSGGARSQAASILTKFQELKD R T V A R S 1 1 0 2 0 0 0 5 1 0 2 0 0 1 1 1 3 0 0 2 0 0 20 0 1955.9701 O95347 O95347 649 668 SMC2 Structural maintenance of chromosomes protein 2 yes yes 3 2.8367E-05 121.03 By MS/MS 3.5 0.5 1 1 2 3534400 3534400 0 14468 385 15354 36697;36698 25899 25899 1 92606 0 TVTLKEDPGKV SVDPDSHQGKLVFNRTVTLKEDPGKV____ VFNRTVTLKEDPGKV_______________ R T V K V - 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 0 2 0 0 2 0 0 11 2 1185.6605 P47897 P47897 765 775 QARS Glutamine--tRNA ligase yes yes 2 0.040115 108.43 By MS/MS 5 0 1 1 884250 884250 0 14469 896 15355 36699 25900 25900 1 36346 0 TVTLPENEDELESTNR APGVRVSGDDVIIGKTVTLPENEDELESTN VTLPENEDELESTNRRYTKRDCSTFLRTSE K T V N R R 0 1 2 1 0 0 4 0 0 0 2 0 0 0 1 1 3 0 0 1 0 0 16 0 1845.8592 P30876 P30876 870 885 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 8.1474E-15 206.32 By MS/MS 3.5 0.5 1 1 2 1875000 1875000 0 14470 748 15356 36700;36701 25901 25901 1 49350 0 TVTNAVVTVPAYFNDSQR VLTKMKEIAEAYLGKTVTNAVVTVPAYFND NAVVTVPAYFNDSQRQATKDAGTIAGLNVL K T V Q R Q 2 1 2 1 0 1 0 0 0 0 0 0 0 1 1 1 3 0 1 4 0 0 18 0 1980.9905 P11142 P11142 138 155 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 1.4318E-18 198.29 By MS/MS 5.62 1.87 1 1 3 1 1 1 8 37222000 37222000 0 14471 546 15357 36702;36703;36704;36705;36706;36707;36708;36709 25902;25903;25904;25905;25906;25907 25904 6 1532300 0 TVTPALSSNVLPR GPPKDSSAPGGPPERTVTPALSSNVLPRHL ERTVTPALSSNVLPRHLGSPATSVPGMGLH R T V P R H 1 1 1 0 0 0 0 0 0 0 2 0 0 0 2 2 2 0 0 2 0 0 13 0 1353.7616 Q9C0E8 Q9C0E8 211 223 LNP Protein lunapark yes yes 2 0.00018641 149.94 By MS/MS 6.5 0.5 1 1 2 3209700 3209700 0 14472 2437 15358 36710;36711 25908 25908 1 28083 0 TVTQLVAEDGSR EMKLKRRRQRPNLPRTVTQLVAEDGSRVYV LPRTVTQLVAEDGSRVYVVGTAHFSDDSKR R T V S R V 1 1 0 1 0 1 1 1 0 0 1 0 0 0 0 1 2 0 0 2 0 0 12 0 1274.6466 Q9H4I3 Q9H4I3 63 74 TRABD TraB domain-containing protein yes yes 2 1.3877E-07 214.67 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 12233000 12217000 15717 14473 2500 15359 36712;36713;36714;36715;36716 25909 25909 1 531340 64523 TVVAEYAIALAQK RHDSVFVAAHTSAGKTVVAEYAIALAQKHM GKTVVAEYAIALAQKHMTRTIYTSPIKALS K T V Q K H 4 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 1 2 0 0 13 0 1375.7711 Q15477 Q15477 339 351 SKIV2L Helicase SKI2W yes yes 2 2.7171E-05 166.86 By MS/MS 3 0 1 1 612720 612720 0 14474 1506 15360 36717 25910 25910 1 15995 0 TVVDSEGRTETTVTR VTKITKPDGIVEERRTVVDSEGRTETTVTR TVVDSEGRTETTVTRHEADSSPRGDPESPR R T V T R H 0 2 0 1 0 0 2 1 0 0 0 0 0 0 0 1 5 0 0 3 0 0 15 1 1649.822 O00165 O00165 228 242 HAX1 HCLS1-associated protein X-1 yes yes 2 0.0016022 132.79 By MS/MS 8 0 1 1 1804500 1804500 0 14475 73 15361 36718 25911 25911 1 119040 0 TVVEALFQR EESVFAVTAVNASEKTVVEALFQRDSLVRQ VNASEKTVVEALFQRDSLVRQSQLVVDWLE K T V Q R D 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 2 0 0 9 0 1061.5869 P57740 P57740 251 259 NUP107 Nuclear pore complex protein Nup107 yes yes 2 1.8957E-06 188.98 By MS/MS 4 0 1 1 1109700 1109700 0 14476 1057 15362 36719 25912 25912 1 30294 0 TVVTGIEMFHK KGDECELLGHSKNIRTVVTGIEMFHKSLER KNIRTVVTGIEMFHKSLERAEAGDNLGALV R T V H K S 0 0 0 0 0 0 1 1 1 1 0 1 1 1 0 0 2 0 0 2 0 0 11 0 1260.6536 P49411 P49411 301 311 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 3.7879E-16 218.58 By MS/MS 7.42 1.26 1 1 5 3 1 1 12 188370000 188370000 0 14477 918 15363;15364 36720;36721;36722;36723;36724;36725;36726;36727;36728;36729;36730;36731 25913;25914;25915;25916;25917;25918;25919 25914 685 7 3905700 0 TVYGGGCSEMLMAHAVTQLANR HDALCVLAQTVKDSRTVYGGGCSEMLMAHA SEMLMAHAVTQLANRTPGKEAVAMESYAKA R T V N R T 3 1 1 0 1 1 1 3 1 0 2 0 2 0 0 1 2 0 1 2 0 0 22 0 2365.0977 P78371 P78371 406 427 CCT2 T-complex protein 1 subunit beta yes yes 2;3 0.0076922 58.885 By MS/MS 6 0 2 2 13136000 13136000 0 14478 1195 15365;15366 36732;36733 25920;25921 25920 949;950 2 102430 0 TVYHAEEVQCDGR MPVWGGGNKCGACGRTVYHAEEVQCDGRSF GRTVYHAEEVQCDGRSFHRCCFLCMVCRKN R T V G R S 1 1 0 1 1 1 2 1 1 0 0 0 0 0 0 0 1 0 1 2 0 0 13 0 1562.6784 Q16527 Q16527 16 28 CSRP2 Cysteine and glycine-rich protein 2 yes yes 3 0.0036636 99.669 By MS/MS 9 0 1 1 457150 457150 0 14479 1536 15367 36734 25922 25922 1 262360 0 TVYQHQK ISQRYQKFALPQYLKTVYQHQKAMKPWIQP FALPQYLKTVYQHQKAMKPWIQPKTKVIPY K T V Q K A 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 1 0 1 1 0 0 7 0 902.46102 CON__P02663 CON__P02663 182 188 yes yes 2 0.030339 114.72 By MS/MS 5.5 1.12 1 1 1 1 4 1328100 1328100 0 + 14480 38 15368 36735;36736;36737;36738 25923 25923 1 42987 0 TVYVSVLPTTADF QEITEDIPVKTLNMKTVYVSVLPTTADF__ MKTVYVSVLPTTADF_______________ K T V D F - 1 0 0 1 0 0 0 0 0 0 1 0 0 1 1 1 3 0 1 3 0 0 13 0 1411.7235 P41252 P41252 1250 1262 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.0020167 119.68 By MS/MS 3.5 0.5 1 1 2 2325300 2325300 0 14481 840 15369 36739;36740 25924;25925 25924 2 60703 0 TWNDPSVQQDIK NPENTVFDAKRLIGRTWNDPSVQQDIKFLP IGRTWNDPSVQQDIKFLPFKVVEKKTKPYI R T W I K F 0 0 1 2 0 2 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 0 12 0 1429.6838 P11021 P11021 102 113 HSPA5 78 kDa glucose-regulated protein yes yes 2 4.0022E-13 245.13 By MS/MS By matching 6.67 1.49 2 1 1 1 1 5 1 5810500 5703000 107550 14482 545 15370 36741;36742;36743;36744;36745;36746 25926;25927;25928 25926 3 178220 318240 TWQANLR QNRWALWFFKNDKSKTWQANLRLISKFDTV FFKNDKSKTWQANLRLISKFDTVEDFWALY K T W L R L 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 7 0 887.46135 P06730 P06730 55 61 EIF4E Eukaryotic translation initiation factor 4E yes yes 2 0.034542 111.82 By MS/MS 9 0 1 1 2863600 2863600 0 14483 481 15371 36747 25929 25929 1 1643400 0 TWQDSDTVK SSQKVSPIQIDGAGRTWQDSDTVKLLVDLE IDGAGRTWQDSDTVKLLVDLELSYGFENGQ R T W V K L 0 0 0 2 0 1 0 0 0 0 0 1 0 0 0 1 2 1 0 1 0 0 9 0 1078.4931 Q8NFQ8 Q8NFQ8 336 344 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 2 0.0027716 121.5 By MS/MS 5 0 1 1 1210400 1210400 0 14484 1973 15372 36748 25930 25930 1 49751 0 TYAICGAIR AEVDKVTGRFNGQFKTYAICGAIRRMGESD FNGQFKTYAICGAIRRMGESDDSILRLAKA K T Y I R R 2 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1023.5172 P63220 P63220 52 60 RPS21 40S ribosomal protein S21 yes yes 2 0.00032296 157.33 By MS/MS By MS/MS 10 0 2 1 1 1639300 1453100 186160 14485 1176 15373 36749;36750 25931;25932 25932 2 1544500 4775000 TYAVGIQQVLLK NVTKEYFEFSEFFLKTYAVGIQQVLLKILD FLKTYAVGIQQVLLKILDQYRQKEYVAPRV K T Y L K I 1 0 0 0 0 2 0 1 0 1 2 1 0 0 0 0 1 0 1 2 0 0 12 0 1331.7813 O15397 O15397 296 307 IPO8 Importin-8 yes yes 2 6.1976E-11 201.61 By MS/MS 4.5 0.5 1 1 2 654880 654880 0 14486 175 15374 36751;36752 25933 25933 1 19008 0 TYEAALETIQNMSK GEGVLIIFDEPPVDKTYEAALETIQNMSKV KTYEAALETIQNMSKVVDSLYNKAKKLT__ K T Y S K V 2 0 1 0 0 1 2 0 0 1 1 1 1 0 0 1 2 0 1 0 0 0 14 0 1597.7658 O00231 O00231 396 409 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 8.2719E-60 304.38 By MS/MS 7 0 2 2 1705200 1705200 0 14487 80 15375;15376 36753;36754 25934;25935 25934 45 2 30473 0 TYEEGLKHEANNPQLK AAALEFLNRFEEAKRTYEEGLKHEANNPQL YEEGLKHEANNPQLKEGLQNMEARLAERKF R T Y L K E 1 0 2 0 0 1 3 1 1 0 2 2 0 0 1 0 1 0 1 0 0 0 16 1 1869.9221 P31948 P31948 94 109 STIP1 Stress-induced-phosphoprotein 1 yes yes 2;3 5.2061E-05 168.83 By MS/MS 5.5 0.5 2 2 4 11119000 11119000 0 14488 762 15377 36755;36756;36757;36758 25936;25937;25938 25938 3 186550 0 TYEQVLENLESK EPAVFKATLDRSLLKTYEQVLENLESKRFQ LLKTYEQVLENLESKRFQLVDSRSQGRFLG K T Y S K R 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 1 1 0 1 1 0 0 12 0 1451.7144 Q16762 Q16762 164 175 TST Thiosulfate sulfurtransferase yes yes 2 1.0778E-07 226.33 By MS/MS 8 0 1 1 520330 520330 0 14489 1546 15378 36759 25939 25939 1 34326 0 TYEVNEVGVLNPNEQPTHK VVSKGDKIVSAHTQKTYEVNEVGVLNPNEQ NEVGVLNPNEQPTHKLYAGQVGYLIAGMKD K T Y H K L 0 0 3 0 0 1 3 1 1 0 1 1 0 0 2 0 2 0 1 3 0 0 19 0 2167.0546 Q8N442 Q8N442 294 312 GUF1 Translation factor GUF1, mitochondrial yes yes 3 0.00018611 118.21 By MS/MS 5 0 1 1 1864400 1864400 0 14490 1913 15379 36760 25940 25940 1 76636 0 TYEVSLR TICFVYQDPQGRHVKTYEVSLREKEFNKGP DPQGRHVKTYEVSLREKEFNKGPWKQENVE K T Y L R E 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 7 0 866.44978 Q16531 Q16531 192 198 DDB1 DNA damage-binding protein 1 yes yes 2 0.022143 120.49 By MS/MS 3.5 1.12 1 1 1 1 4 2696100 2696100 0 14491 1537 15380 36761;36762;36763;36764 25941 25941 1 79431 0 TYFTDKK IYEEKHAKRPDADLKTYFTDKKTHLYTLIL KRPDADLKTYFTDKKTHLYTLILNPDNSFE K T Y K K T 0 0 0 1 0 0 0 0 0 0 0 2 0 1 0 0 2 0 1 0 0 0 7 1 901.45453 P27824 P27824 228 234 CANX Calnexin yes yes 3 0.028109 110.63 By MS/MS 4.5 0.5 1 1 2 1296500 1296500 0 14492 711 15381 36765;36766 25942 25942 1 37434 0 TYGEPESAGPSR GYNDDYYEESYFTTRTYGEPESAGPSRAVR TTRTYGEPESAGPSRAVRQSVTSFPDADAF R T Y S R A 1 1 0 0 0 0 2 2 0 0 0 0 0 0 2 2 1 0 1 0 0 0 12 0 1249.5575 P50402 P50402 104 115 EMD Emerin yes yes 2 4.4436E-07 194.12 By MS/MS By MS/MS 8.17 1.07 2 2 1 1 4 2 54322000 53921000 401180 14493 945 15382 36767;36768;36769;36770;36771;36772 25943;25944;25945;25946;25947 25945 5 5452100 3214400 TYGQSTYSR KPIRALDEGDIALLKTYGQSTYSRQIKQVE DIALLKTYGQSTYSRQIKQVEDDIQQLLKK K T Y S R Q 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 2 2 0 2 0 0 0 9 0 1061.4778 P35998 P35998 35 43 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.0036294 118.71 By MS/MS By matching 7 0.707 1 2 1 2 2 5185200 5138700 46527 14494 801 15383 36773;36774;36775;36776 25948 25948 1 112690 169050 TYGTTTAPR RLTFNHDGSSRYGPRTYGTTTAPRDEDGST SRYGPRTYGTTTAPRDEDGSTLFRGWSQEG R T Y P R D 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 4 0 1 0 0 0 9 0 966.47706 Q9C0C2 Q9C0C2 201 209 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.039577 85.67 By MS/MS 2 0 1 1 134370 134370 0 14495 2433 15384 36777 25949 25949 1 6679 0 TYHALSNLPK DDKALLVEVQLLESKTYHALSNLPKARAAL LLESKTYHALSNLPKARAALTSARTTANAI K T Y P K A 1 0 1 0 0 0 0 0 1 0 2 1 0 0 1 1 1 0 1 0 0 0 10 0 1142.6084 O00231 O00231 176 185 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2;3 4.1572E-05 172.25 By MS/MS By matching 7 0 4 3 1 30546000 30537000 8836.6 14496 80 15385 36778;36779;36780;36781 25950;25951;25952 25950 2 545710 36276 TYIQCIAAISR LLSELSKNDSMSTTRTYIQCIAAISRQAGH STTRTYIQCIAAISRQAGHRIGEYLEKIIP R T Y S R Q 2 1 0 0 1 1 0 0 0 3 0 0 0 0 0 1 1 0 1 0 0 0 11 0 1294.6704 Q86VP6 Q86VP6 233 243 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 2 0.0018944 121.68 By MS/MS 4 0 1 1 815890 815890 0 14497 1829 15386 36782 25953 25953 1 22273 0 TYLPSQVSR LIRTGRLPEAAFLARTYLPSQVSRVVKLWR AAFLARTYLPSQVSRVVKLWRENLSKVNQK R T Y S R V 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 2 1 0 1 1 0 0 9 0 1049.5506 P35606 P35606 760 768 COPB2 Coatomer subunit beta yes yes 2 0.0053445 114.97 By MS/MS 1.5 0.5 1 1 2 3489500 3489500 0 14498 795 15387 36783;36784 25954 25954 1 171340 0 TYLQALPYFDR IGLLHRGTEKLIEYKTYLQALPYFDRLDYV IEYKTYLQALPYFDRLDYVSMMCNEQAYSL K T Y D R L 1 1 0 1 0 1 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 11 0 1385.698 O75306 O75306 128 138 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.0067463 101.3 By MS/MS 7 0 1 1 752580 752580 0 14499 294 15388 36785 25955 25955 1 13449 0 TYQGSYGFR PAPSWPLSSSVPSQKTYQGSYGFRLGFLHS SVPSQKTYQGSYGFRLGFLHSGTAKSVTCT K T Y F R L 0 1 0 0 0 1 0 2 0 0 0 0 0 1 0 1 1 0 2 0 0 0 9 0 1077.488 P04637 P04637 102 110 TP53 Cellular tumor antigen p53 yes yes 2 0.010578 103.55 By MS/MS By matching 6 0 2 1 1 4658600 4644400 14215 14500 455 15389 36786;36787 25956 25956 1 36217 43595 TYREYFGEK RRRAEQEAQAPHWWRTYREYFGEKTDPKEK APHWWRTYREYFGEKTDPKEKIDIGLPPPK R T Y E K T 0 1 0 0 0 0 2 1 0 0 0 1 0 1 0 0 1 0 2 0 0 0 9 1 1191.556 Q96DV4 Q96DV4 73 81 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 3 0.052563 77.192 By MS/MS 7 0 1 1 1115300 1115300 0 14501 2155 15390 36788 25957 25957 1 19931 0 TYSVVPMTSR LAQDSACSQRALQLRTYSVVPMTSRLGLIE ALQLRTYSVVPMTSRLGLIEWLENTVTLKD R T Y S R L 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 2 2 0 1 2 0 0 10 0 1139.5645 P78527 P78527 3790 3799 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.002997 109.48 By MS/MS 1.5 0.5 2 2 4 2851000 2851000 0 14502 1197 15391;15392 36789;36790;36791;36792 25958;25959;25960;25961 25958 980 4 140160 0 TYTDELTPIESAVSVFK YNLLSLRFNSRIRVKTYTDELTPIESAVSV TDELTPIESAVSVFKAANWYEREIWDMFGV K T Y F K A 1 0 0 1 0 0 2 0 0 1 1 1 0 1 1 2 3 0 1 2 0 0 17 0 1898.9513 O75489 O75489 145 161 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.0088726 118.76 By MS/MS 8 0 1 1 577590 577590 0 14503 313 15393 36793 25962;25963 25963 2 38103 0 TYTQLVR TPEKWDIITRKGGERTYTQLVRLIILDEIH ITRKGGERTYTQLVRLIILDEIHLLHDDRG R T Y V R L 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 2 0 1 1 0 0 7 0 879.48142 O75643 O75643 604 610 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.018801 129.68 By MS/MS 1.5 0.5 1 1 2 739600 739600 0 14504 322 15394 36794;36795 25964;25965 25964 2 36471 0 TYYMSGGLQPVPIVFR FSMQAIDQVINSAAKTYYMSGGLQPVPIVF YYMSGGLQPVPIVFRGPNGASAGVAAQHSQ K T Y F R G 0 1 0 0 0 1 0 2 0 1 1 0 1 1 2 1 1 0 2 2 0 0 16 0 1826.9389 P11177 P11177 130 145 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 4.9287E-29 240.8 By MS/MS 7.5 0.5 1 1 2 1360500 1360500 0 14505 549 15395 36796;36797 25966;25967 25966 344 2 58011 0 VAAAASCLSQK LTLIDYDMVHYHPSKVAAAASCLSQKVLGQ HPSKVAAAASCLSQKVLGQGKWNLKQQYYT K V A Q K V 4 0 0 0 1 1 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1104.5597 O95067 O95067 308 318 CCNB2 G2/mitotic-specific cyclin-B2 yes yes 2 0.0038139 112.71 By MS/MS 7 0 1 1 529620 529620 0 14506 363 15396 36798 25968 25968 1 9464.3 0 VAAAESMPLLLECAR LMVPLLKFYFHDGVRVAAAESMPLLLECAR VAAAESMPLLLECARVRGPEYLTQMWHFMC R V A A R V 4 1 0 0 1 0 2 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 15 0 1629.8218 O00410 O00410 721 735 IPO5 Importin-5 yes yes 2 5.7393E-10 182.35 By MS/MS By MS/MS 4 0.632 1 3 1 4 1 4963800 4922900 40917 14507 91 15397;15398 36799;36800;36801;36802;36803 25969;25970;25971;25972;25973 25971 60 5 141270 85500 VAAAQSQVQVLK QDAGERSRLQEFRRRVAAAQSQVQVLKEKK RRRVAAAQSQVQVLKEKKQATERLVSLSAQ R V A L K E 3 0 0 0 0 3 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 12 0 1240.7139 Q2M1P5 Q2M1P5 790 801 KIF7 Kinesin-like protein KIF7 yes yes 2 0.001667 125.72 By MS/MS 3 0 1 1 667610 667610 0 14508 1558 15399 36804 25974 25974 1 17428 0 VAAAVDLIIK RVLEALLPLKGLEERVAAAVDLIIKSHQGL GLEERVAAAVDLIIKSHQGLDRQELSFAAR R V A I K S 3 0 0 1 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1011.6328 P49327 P49327 2397 2406 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.005261 106.6 By MS/MS 3 0.816 1 1 1 3 1042000 1042000 0 14509 915 15400 36805;36806;36807 25975;25976 25975 2 42208 0 VAAEFSSR LLGQLQVEVENFVLRVAAEFSSRKEQLVFL VENFVLRVAAEFSSRKEQLVFLINNYDMML R V A S R K 2 1 0 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 0 0 8 0 865.42938 Q8N1B4 Q8N1B4 550 557 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 2 0.021797 104.44 By MS/MS By matching 4.33 0.471 2 1 2 1 908920 898980 9936.5 14510 1897 15401 36808;36809;36810 25977 25977 1 29946 20763 VAAGLQIK LSRVLANPGNSQVARVAAGLQIKNSLTSKD GNSQVARVAAGLQIKNSLTSKDPDIKAQYQ R V A I K N 2 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 798.49634 Q14974 Q14974 55 62 KPNB1 Importin subunit beta-1 yes yes 2 0.0082741 124.89 By MS/MS 6 1.41 1 1 1 1 1 5 3992300 3992300 0 14511 1452 15402 36811;36812;36813;36814;36815 25978 25978 1 112920 0 VAAGTLDASTK SEILKQKDTEPTNFKVAAGTLDASTKIYAV TNFKVAAGTLDASTKIYAVRVDAVHADVYR K V A T K I 3 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 11 0 1032.5451 Q15003 Q15003 153 163 NCAPH Condensin complex subunit 2 yes yes 2 0.024237 85.533 By MS/MS 2.5 1.12 1 1 1 1 4 2520600 2520600 0 14512 1457 15403 36816;36817;36818;36819 25979 25979 1 69635 0 VAAGVLCELAQDK LFVQLLYSSVENIQRVAAGVLCELAQDKEA QRVAAGVLCELAQDKEAADAIDAEGASAPL R V A D K E 3 0 0 1 1 1 1 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 13 0 1372.7021 P14923;P35222 P14923 603 615 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 no no 2 0.0058011 100.93 By MS/MS 4.5 0.5 1 1 2 419960 419960 0 14513 595;781 15404 36820;36821 25980 25980 1 14834 0 VAAIEALNDGELQK AEITEEMMDQANDKKVAAIEALNDGELQKA KVAAIEALNDGELQKAIDLFTDAIKLNPRL K V A Q K A 3 0 1 1 0 1 2 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1469.7726 P50502;Q8IZP2 P50502 119 132 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 2 5.3264E-26 246.56 By MS/MS By matching 6.75 0.829 2 1 1 3 1 9352300 9333000 19319 14514 948 15405 36822;36823;36824;36825 25981 25981 1 97317 59250 VAAIQQILGK KASELNPESIYSVFKVAAIQQILGKYKEAV YSVFKVAAIQQILGKYKEAVAQYQMIIKKK K V A G K Y 2 0 0 0 0 2 0 1 0 2 1 1 0 0 0 0 0 0 0 1 0 0 10 0 1039.639 Q6PGP7 Q6PGP7 638 647 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.00029388 153.04 By MS/MS 3 0 1 1 864030 864030 0 14515 1714 15406 36826 25982 25982 1 22556 0 VAALQNLVK QVVCEATQCPDTRVRVAALQNLVKIMSLYY PDTRVRVAALQNLVKIMSLYYQYMETYMGP R V A V K I 2 0 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 954.58622 Q14974 Q14974 235 243 KPNB1 Importin subunit beta-1 yes yes 2 0.0002118 163.34 By MS/MS 4.5 0.5 1 1 2 8108600 8108600 0 14516 1452 15407 36827;36828 25983;25984 25983 2 256020 0 VAALQTAADAFYK HIRASYAAEERIEGRVAALQTAADAFYKAK GRVAALQTAADAFYKAKNEFAAKATEDQMR R V A Y K A 5 0 0 1 0 1 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 0 13 0 1367.7085 Q9H269 Q9H269 648 660 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 2 3.6456E-05 163.45 By MS/MS 4.5 0.5 1 1 2 1355300 1355300 0 14517 2472 15408 36829;36830 25985 25985 1 38695 0 VAAPDVVVPTLDTVR PWQAKVPQIEVETHKVAAPDVVVPTLDTVR VAAPDVVVPTLDTVRHEALLYTWLAEHKPL K V A V R H 2 1 0 2 0 0 0 0 0 0 1 0 0 0 2 0 2 0 0 5 0 0 15 0 1550.8668 Q14204 Q14204 2562 2576 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.037112 72.731 By MS/MS 2 0.816 1 1 1 3 1933700 1933700 0 14518 1421 15409 36831;36832;36833 25986;25987 25986 2 88597 0 VAAQCSHAAVSAYK MILVVRNDLKMGKGKVAAQCSHAAVSAYKQ KVAAQCSHAAVSAYKQIQRRNPEMLKQWEY K V A Y K Q 5 0 0 0 1 1 0 0 1 0 0 1 0 0 0 2 0 0 1 2 0 0 14 0 1461.7034 Q9Y3E5 Q9Y3E5 82 95 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 3 0.05169 59.864 By MS/MS 9.5 0.5 1 1 2 1425800 1425800 0 14519 2936 15410 36834;36835 25988 25988 1 1067000 0 VAASCGAIQYIPTELDQVR KNTPVRYTVYCSLIKVAASCGAIQYIPTEL CGAIQYIPTELDQVRKWISDWNLTTEKKHT K V A V R K 3 1 0 1 1 2 1 1 0 2 1 0 0 0 1 1 1 0 1 2 0 0 19 0 2090.0466 Q7L2H7 Q7L2H7 130 148 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2;3 5.3184E-27 232.37 By MS/MS 7.5 0.5 2 2 4 4246800 4246800 0 14520 1764 15411 36836;36837;36838;36839 25989;25990;25991 25989 3 103110 0 VAASIGNAQK NKPSGFRSVKAPVTKVAASIGNAQKLPMCD APVTKVAASIGNAQKLPMCDKCGTGIVGVF K V A Q K L 3 0 1 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 10 0 957.52434 O00151 O00151 247 256 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 5.2698E-07 195.05 By MS/MS 8 0.707 1 2 1 4 3929300 3929300 0 14521 71 15412 36840;36841;36842;36843 25992;25993 25993 2 1201100 0 VAASPEDIK WKPGYLDRALQVMEKVAASPEDIKLCREAL LQVMEKVAASPEDIKLCREALDVLGAVLKA K V A I K L 2 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 9 0 928.48656 Q92552 Q92552 266 274 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.01049 103.74 By MS/MS 7 0 1 1 4740800 4740800 0 14522 2059 15413 36844 25994 25994 1 84719 0 VAASPEDIKLCR WKPGYLDRALQVMEKVAASPEDIKLCREAL MEKVAASPEDIKLCREALDVLGAVLKALTS K V A C R E 2 1 0 1 1 0 1 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 12 1 1357.7024 Q92552 Q92552 266 277 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0021222 148.56 By MS/MS 7 0 1 1 3615400 3615400 0 14523 2059 15414 36845 25995 25995 1 64608 0 VAASTQPLGR ELIQLVAARLAEHERVAASTQPLGRIRALF AEHERVAASTQPLGRIRALFPAPLAQISTP R V A G R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 0 998.55089 Q8ND24 Q8ND24 610 619 RNF214 RING finger protein 214 yes yes 2 0.0066475 102.07 By MS/MS 5 0 1 1 850340 850340 0 14524 1957 15415 36846 25996 25996 1 34952 0 VAASVLNPYVK EKELLRVAQILKEPKVAASVLNPYVKRSIK KEPKVAASVLNPYVKRSIKVKSLNDITAKE K V A V K R 2 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 3 0 0 11 0 1159.6601 P48047 P48047 74 84 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 1.5278E-07 192.91 By MS/MS By matching 9.33 0.471 2 1 2 1 51209000 51087000 122340 14525 900 15416 36847;36848;36849 25997;25998 25997 2 29582000 1318500 VAAYDKLEK LQKDLEGLSQRHEEKVAAYDKLEKTKTRLQ QRHEEKVAAYDKLEKTKTRLQQELDDLLVD K V A E K T 2 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 1 1 0 0 9 1 1035.5601 P35579 P35579 1405 1413 MYH9 Myosin-9 yes yes 3 0.01603 88.177 By MS/MS 2.5 0.5 1 1 2 584270 584270 0 14526 793 15417 36850;36851 25999 25999 1 27698 0 VADAATEVQHK SELSKSASAKSIDSKVADAATEVQHKTTEA IDSKVADAATEVQHKTTEALKSEEKAMDIS K V A H K T 3 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1167.5884 Q5SW79 Q5SW79 143 153 CEP170 Centrosomal protein of 170 kDa yes yes 2;3 0.00037736 147.73 By MS/MS 2 0.707 1 2 1 4 1513100 1513100 0 14527 1621 15418 36852;36853;36854;36855 26000;26001 26001 2 72614 0 VADGGGAGGTFQPYLDTLR ______________________________ GGAGGTFQPYLDTLRQELQQTDPTLLSVVV R V A L R Q 2 1 0 2 0 1 0 5 0 0 2 0 0 1 1 0 2 0 1 1 0 0 19 0 1893.9221 Q9Y5M8 Q9Y5M8 9 27 SRPRB Signal recognition particle receptor subunit beta yes yes 2 8.0787E-56 272.74 By MS/MS 9 0.816 1 1 1 3 10683000 10683000 0 14528 2976 15419 36856;36857;36858 26002;26003;26004;26005 26002 4 1268200 0 VADGLPLAASMQEDEQSGR ______________________________ LPLAASMQEDEQSGRDLQQYQSQAKQLFRK R V A G R D 3 1 0 2 0 2 2 2 0 0 2 0 1 0 1 2 0 0 0 1 0 0 19 0 1972.916 O75396 O75396 10 28 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 1.3544E-14 184 By MS/MS 8.67 0.471 1 2 3 3539500 3539500 0 14529 304 15420;15421 36859;36860;36861 26006;26007 26007 167 2 1894600 0 VADGLPLAASMQEDEQSGRDLQQYQSQAK ______________________________ EQSGRDLQQYQSQAKQLFRKLNEQSPTRCT R V A A K Q 4 1 0 3 0 6 2 2 0 0 3 1 1 0 1 3 0 0 1 1 0 0 29 1 3162.4888 O75396 O75396 10 38 SEC22B Vesicle-trafficking protein SEC22b yes yes 3 0.0011913 59.691 By MS/MS 8.5 0.5 1 1 2 1521200 1521200 0 14530 304 15422 36862;36863 26008 26008 167 1 774790 0 VADIGLAAWGR ______________________________ LPYKVADIGLAAWGRKALDIAENEMPGLMR K V A G R K 3 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 1 0 0 11 0 1127.6087 P23526 P23526 9 19 AHCY Adenosylhomocysteinase yes yes 2 8.2613E-05 164.46 By MS/MS 7 0 1 1 4202800 4202800 0 14531 670 15423 36864 26009 26009 1 75104 0 VADISGDTQK NGKGLHSKKEVPIHRVADISGDTQKAKQFL VPIHRVADISGDTQKAKQFLPFLQRAGRSE R V A Q K A 1 0 0 2 0 1 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 10 0 1032.5088 Q7KZF4 Q7KZF4 504 513 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.011944 97.965 By MS/MS 4 0 1 1 1596900 1596900 0 14532 1757 15424 36865 26010 26010 1 43594 0 VADLADFVK QTVLIFDELSDSLCRVADLADFVKIAHPEP SDSLCRVADLADFVKIAHPEPAFREAAEEA R V A V K I 2 0 0 2 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 9 0 976.52295 Q99797 Q99797 118 126 MIPEP Mitochondrial intermediate peptidase yes yes 2 0.036092 87.639 By MS/MS 6.5 1.12 1 1 1 1 4 2860400 2860400 0 14533 2291 15425 36866;36867;36868;36869 26011 26011 1 78167 0 VADLILEK YRDKLKQQQAAVSKKVADLILEKQPAYVKE QAAVSKKVADLILEKQPAYVKELERVTSLQ K V A E K Q 1 0 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 899.53278 Q96JG6 Q96JG6 104 111 CCDC132 Coiled-coil domain-containing protein 132 yes yes 2 0.022264 103.83 By MS/MS 5 0 1 1 802500 802500 0 14534 2208 15426 36870 26012 26012 1 32986 0 VADLTEQYNEQYGAVR EGHWSKECPIDRSGRVADLTEQYNEQYGAV ADLTEQYNEQYGAVRTPYTMSYGDSLYYNN R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 1.4934E-148 399.21 By MS/MS 7.5 0.5 1 1 2 4499700 4499700 0 14535 2392 15427 36871;36872 26013 26013 1 93074 0 VADMALHYANK AIADTGANVVVTGGKVADMALHYANKYNIM TGGKVADMALHYANKYNIMLVRLNSKWDLR K V A N K Y 3 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 1 1 0 0 11 0 1231.6019 P50990 P50990 297 307 CCT8 T-complex protein 1 subunit theta yes yes 2;3 0.0012237 130.66 By MS/MS 6.4 0.49 3 2 5 31439000 31439000 0 14536 955 15428;15429 36873;36874;36875;36876;36877 26014;26015;26016;26017 26016 709 3 248910 0 VADNQELQLSNLLSR HMRNLQQQELHRLLRVADNQELQLSNLLSR VADNQELQLSNLLSRDRISPEGLEKMAQLR R V A S R D 1 1 2 1 0 2 1 0 0 0 4 0 0 0 0 2 0 0 0 1 0 0 15 0 1698.8901 Q86US8 Q86US8 587 601 SMG6 Telomerase-binding protein EST1A yes yes 2 3.7934E-38 255.24 By MS/MS 3.5 0.5 1 1 2 813970 813970 0 14537 1824 15430 36878;36879 26018 26018 1 21434 0 VADRLGLELGK IVLFSGSSHQDLSQRVADRLGLELGKVVTK LSQRVADRLGLELGKVVTKKFSNQETSVEI R V A G K V 1 1 0 1 0 0 1 2 0 0 3 1 0 0 0 0 0 0 0 1 0 0 11 1 1169.6768 P11908 P11908 19 29 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes yes 3 0.0018687 111.52 By MS/MS 8 0 1 1 1173100 1173100 0 14538 559 15431 36880 26019 26019 1 77387 0 VADWTGATYQDKR DMPYQPFSKGDRLGKVADWTGATYQDKRYT GKVADWTGATYQDKRYTNKYSSQFGGGSQY K V A K R Y 2 1 0 2 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 1 0 0 13 1 1509.7212 O15371 O15371 42 54 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2;3 6.4781E-07 181.31 By MS/MS By matching 6.7 1.27 2 3 2 2 1 8 2 48041000 47906000 134940 14539 172 15432 36881;36882;36883;36884;36885;36886;36887;36888;36889;36890 26020;26021;26022 26021 3 579410 412190 VADYIPQLAK IDELYESAKKQSGGKVADYIPQLAKFSPDL QSGGKVADYIPQLAKFSPDLWGVSVCTVDG K V A A K F 2 0 0 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 10 0 1116.6179 O94925 O94925 246 255 GLS Glutaminase kidney isoform, mitochondrial yes yes 2 0.018148 93.649 By MS/MS 6.5 0.5 1 1 2 17385000 17385000 0 14540 359 15433 36891;36892 26023 26023 1 145050 0 VAEDEAEAAAAAK MSLAGAEKNGLVKIKVAEDEAEAAAAAKFT IKVAEDEAEAAAAAKFTGLSKEELLKVAGS K V A A K F 7 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 13 0 1244.5885 P08195 P08195 148 160 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 7.0453E-08 189.58 By MS/MS 7.33 1.7 1 1 1 3 3512900 3512900 0 14541 499 15434 36893;36894;36895 26024;26025 26024 2 268950 0 VAEEHAPSIVFIDEIDAIGTK KYLGDGPKLVRELFRVAEEHAPSIVFIDEI PSIVFIDEIDAIGTKRYDSNSGGEREIQRT R V A T K R 3 0 0 2 0 0 3 1 1 4 0 1 0 1 1 1 1 0 0 2 0 0 21 0 2253.1529 P62191 P62191 273 293 PSMC1 26S protease regulatory subunit 4 yes yes 2;3 1.3601E-05 143.97 By MS/MS 6 0 2 2 9970300 9970300 0 14542 1116 15435 36896;36897 26026;26027 26026 2 77749 0 VAEEHAPSIVFIDEIDAIGTKR KYLGDGPKLVRELFRVAEEHAPSIVFIDEI SIVFIDEIDAIGTKRYDSNSGGEREIQRTM R V A K R Y 3 1 0 2 0 0 3 1 1 4 0 1 0 1 1 1 1 0 0 2 0 0 22 1 2409.254 P62191 P62191 273 294 PSMC1 26S protease regulatory subunit 4 yes yes 3;4 3.2612E-05 102.43 By MS/MS 6 0 2 2 8434000 8434000 0 14543 1116 15436 36898;36899 26028;26029 26029 2 65768 0 VAEELIFGTDHITTGASSDFDNATK RAQLLAQMDVSMGGRVAEELIFGTDHITTG HITTGASSDFDNATKIAKRMVTKFGMSEKL R V A T K I 3 0 1 3 0 0 2 2 1 2 1 1 0 2 0 2 4 0 0 1 0 0 25 0 2638.2399 Q96TA2 Q96TA2 659 683 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes yes 3 9.4573E-09 108.79 By MS/MS 6 0 1 1 6962600 6962600 0 14544 2263 15437 36900 26030 26030 1 54295 0 VAEFHTELERLPAK QLLGLNLLFLLSQNRVAEFHTELERLPAKD RVAEFHTELERLPAKDIQTNVYIKHPVSLE R V A A K D 2 1 0 0 0 0 3 0 1 0 2 1 0 1 1 0 1 0 0 1 0 0 14 1 1638.873 P48556 P48556 205 218 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 3 0.027812 65.092 By MS/MS 8 0 1 1 2405300 2405300 0 14545 906 15438 36901 26031 26031 1 158670 0 VAEGQVTCPYLPPFPAR AEYLHWLLTNIPGNRVAEGQVTCPYLPPFP EGQVTCPYLPPFPARGSGIHRLAFLLFKQD R V A A R G 2 1 0 0 1 1 1 1 0 0 1 0 0 1 4 0 1 0 1 2 0 0 17 0 1900.9506 Q96DV4 Q96DV4 245 261 MRPL38 39S ribosomal protein L38, mitochondrial yes yes 2 1.0824E-05 177.1 By MS/MS 7 0 1 1 1701800 1701800 0 14546 2155 15439 36902 26032 26032 1 30412 0 VAEIEHAEKEK IKIFGSRVRVDSTAKVAEIEHAEKEKMKEK STAKVAEIEHAEKEKMKEKVERILKHGINC K V A E K M 2 0 0 0 0 0 4 0 1 1 0 2 0 0 0 0 0 0 0 1 0 0 11 1 1281.6565 P78371 P78371 264 274 CCT2 T-complex protein 1 subunit beta yes yes 2;3 2.1236E-06 184.71 By MS/MS By matching 6.62 0.992 1 3 2 2 7 1 190920000 190860000 60464 14547 1195 15440 36903;36904;36905;36906;36907;36908;36909;36910 26033;26034;26035 26035 3 1641200 185440 VAEITELILK LKDQVLRCSKIAGVKVAEITELILKALEND IAGVKVAEITELILKALENDQKVRKEGGKF K V A L K A 1 0 0 0 0 0 2 0 0 2 2 1 0 0 0 0 1 0 0 1 0 0 10 0 1127.6802 Q06265 Q06265 258 267 EXOSC9 Exosome complex component RRP45 yes yes 2 0.00054932 143.04 By MS/MS 6 0.816 1 1 1 3 1329900 1329900 0 14548 1275 15441 36911;36912;36913 26036 26036 1 42307 0 VAEKLEALSVK REKKAGSGKNDHAEKVAEKLEALSVKEETK HAEKVAEKLEALSVKEETKEDAEEKQ____ K V A V K E 2 0 0 0 0 0 2 0 0 0 2 2 0 0 0 1 0 0 0 2 0 0 11 1 1185.6969 P43487 P43487 180 190 RANBP1 Ran-specific GTPase-activating protein yes yes 2;3 0.0036482 143 By MS/MS 8 0 2 2 3415000 3415000 0 14549 865 15442 36914;36915 26037;26038 26037 2 225290 0 VAEQTPLSALYLASLIK KLAPALATGNTVVMKVAEQTPLSALYLASL EQTPLSALYLASLIKEAGFPPGVVNIITGY K V A I K E 3 0 0 0 0 1 1 0 0 1 4 1 0 0 1 2 1 0 1 1 0 0 17 0 1816.0346 P30837 P30837 210 226 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2;3 1.3368E-13 209.22 By MS/MS 6 0 2 2 7628500 7628500 0 14550 747 15443 36916;36917 26039;26040;26041 26039 3 59487 0 VAEQTPLTALYVANLIK KLGPALATGNVVVMKVAEQTPLTALYVANL EQTPLTALYVANLIKEAGFPPGVVNIVPGF K V A I K E 3 0 1 0 0 1 1 0 0 1 3 1 0 0 1 0 2 0 1 2 0 0 17 0 1843.0455 P05091 P05091 210 226 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2;3 7.0614E-14 217.2 By MS/MS 6 0 2 2 13491000 13491000 0 14551 467 15444 36918;36919 26042;26043 26042 2 105210 0 VAEVEGEQVDNK LQTLPEIVAKEAQVKVAEVEGEQVDNKAKL QVKVAEVEGEQVDNKAKLEATLQEEAAIQQ K V A N K A 1 0 1 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 0 3 0 0 12 0 1315.6256 O95202 O95202 452 463 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.014533 91.961 By matching By MS/MS 5.33 0.471 2 1 2 1 1560600 1532700 27977 14552 374 15445 36920;36921;36922 26044 26044 1 23191 82783 VAEVLSSLLGGEGHFSK PQLPRELPSSHTNAKVAEVLSSLLGGEGHF EVLSSLLGGEGHFSKDVHLPHNYHIDFEIR K V A S K D 1 0 0 0 0 0 2 3 1 0 3 1 0 1 0 3 0 0 0 2 0 0 17 0 1728.9046 Q9NYY8 Q9NYY8 578 594 FASTKD2 FAST kinase domain-containing protein 2 yes yes 3 0.035611 61.641 By MS/MS 6 0 1 1 1991400 1991400 0 14553 2701 15446 36923 26045 26045 1 15529 0 VAFDFAAR DPSMGLNEEQKEFQKVAFDFAAREMAPNMA EQKEFQKVAFDFAAREMAPNMAEWDQKELF K V A A R E 3 1 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 8 0 895.4552 Q9UKU7 Q9UKU7 51 58 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 0.01687 110.81 By MS/MS 7.5 0.5 1 1 2 1319100 1319100 0 14554 2816 15447 36924;36925 26046 26046 1 49130 0 VAFITGGGTGLGK PLQKAMLPPNSFQGKVAFITGGGTGLGKGM GKVAFITGGGTGLGKGMTTLLSSLGAQCVI K V A G K G 1 0 0 0 0 0 0 5 0 1 1 1 0 1 0 0 2 0 0 1 0 0 13 0 1176.6503 Q16698 Q16698 61 73 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 2 0.0017039 122.69 By MS/MS 8 0 1 1 1336900 1336900 0 14555 1543 15448 36926 26047 26047 1 88194 0 VAFTGSTEIGR PTAGAAIASHEDVDKVAFTGSTEIGRVIQV DVDKVAFTGSTEIGRVIQVAAGSSNLKRVT K V A G R V 1 1 0 0 0 0 1 2 0 1 0 0 0 1 0 1 2 0 0 1 0 0 11 0 1136.5826 P05091 P05091 258 268 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 1.8928E-07 192.26 By MS/MS 6.5 0.5 1 1 2 7547900 7547900 0 14556 467 15449 36927;36928 26048 26048 1 62284 0 VAGALLR GDLTNLLQNQAVKGKVAGALLRAIFKGSPC QNQAVKGKVAGALLRAIFKGSPCSEEAGTL K V A L R A 2 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 698.44391 Q9NVI1 Q9NVI1 42 48 FANCI Fanconi anemia group I protein yes yes 2 0.022617 120.06 By MS/MS 3 0 1 1 534580 534580 0 14557 2654 15450 36929 26049 26049 1 13955 0 VAGALVQNTEK CAGGPRKGYMGHLTRVAGALVQNTEKGPNA HLTRVAGALVQNTEKGPNAEQLRQLLKELP R V A E K G 2 0 1 0 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 11 0 1128.6139 Q9UPN7 Q9UPN7 470 480 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 2 0.00075049 136.99 By MS/MS 3.5 0.5 1 1 2 661780 661780 0 14558 2851 15451 36930;36931 26050 26050 1 17854 0 VAGALVQNTEKGPNAEQLR CAGGPRKGYMGHLTRVAGALVQNTEKGPNA LVQNTEKGPNAEQLRQLLKELPSEQQEQWE R V A L R Q 3 1 2 0 0 2 2 2 0 0 2 1 0 0 1 0 1 0 0 2 0 0 19 1 1994.0545 Q9UPN7 Q9UPN7 470 488 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 3 0.010747 65.47 By MS/MS 4.5 0.5 1 1 2 1403000 1403000 0 14559 2851 15452 36932;36933 26051 26051 1 43419 0 VAGAQIQGAK SGAGEASKFSDDHYRVAGAQIQGAKEVLAS DDHYRVAGAQIQGAKEVLASDLVVKVRAPM R V A A K E 3 0 0 0 0 2 0 2 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 0 941.52943 Q13423 Q13423 108 117 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.0029686 151.04 By MS/MS 1 0 1 1 0 0 0 14560 1367 15453 36934 26052 26052 1 0 0 VAGDCLDEKQCK WLDLKDNPLDPVLAKVAGDCLDEKQCKQCA LAKVAGDCLDEKQCKQCANKVLQHMKAVQA K V A C K Q 1 0 0 2 2 1 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 12 1 1421.6279 Q96AG4 Q96AG4 127 138 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 2 0.0016854 129.88 By MS/MS 8 0 1 1 0 0 0 14561 2121 15454 36935 26053 26053 1 0 0 VAGIFPR KITKVMDVRLDREHRVAGIFPRLSFKDKST VRLDREHRVAGIFPRLSFKDKSTYIESSTK R V A P R L 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 7 0 758.44391 O96005 O96005 448 454 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 2 0.05613 99.511 By MS/MS 3 1.41 1 1 1 1 1 5 1194100 1194100 0 14562 418 15455 36936;36937;36938;36939;36940 26054 26054 1 47837 0 VAGMDVELTVEER EQAERYDEMVESMKKVAGMDVELTVEERNL KKVAGMDVELTVEERNLLSVAYKNVIGARR K V A E R N 1 1 0 1 0 0 3 1 0 0 1 0 1 0 0 0 1 0 0 3 0 0 13 0 1446.7024 P62258 P62258 30 42 YWHAE 14-3-3 protein epsilon yes yes 2 9.6808E-12 197.73 By MS/MS 8.5 0.5 1 1 2 3878500 3878500 0 14563 1121 15456 36941;36942 26055 26055 878 1 283520 0 VAGQDGSVVQFK TEEVKTENNNHINLKVAGQDGSVVQFKIKR NLKVAGQDGSVVQFKIKRQTPLSKLMKAYC K V A F K I 1 0 0 1 0 2 0 2 0 0 0 1 0 1 0 1 0 0 0 3 0 0 12 0 1233.6354 Q6EEV6;P61956;P55854 Q6EEV6 22 33 SUMO4;SUMO2;SUMO3 Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 yes no 2 9.9458E-05 157.38 By MS/MS 6 2.94 1 1 1 3 4411400 4411400 0 14564 1039 15457 36943;36944;36945 26056;26057;26058 26057 3 639380 0 VAGSPGWVR AAAKFTGLSKEELLKVAGSPGWVRTRWALL KEELLKVAGSPGWVRTRWALLLLFWLGWLG K V A V R T 1 1 0 0 0 0 0 2 0 0 0 0 0 0 1 1 0 1 0 2 0 0 9 0 927.49265 P08195 P08195 172 180 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0060177 113.5 By MS/MS 4.5 0.5 1 1 2 2813400 2813400 0 14565 499 15458 36946;36947 26059 26059 1 101890 0 VAGSVTELIQAAEAMK PSPELKQQLTGHSKRVAGSVTELIQAAEAM AGSVTELIQAAEAMKGTEWVDPEDPTVIAE R V A M K G 4 0 0 0 0 1 2 1 0 1 1 1 1 0 0 1 1 0 0 2 0 0 16 0 1616.8444 Q9Y490 Q9Y490 2276 2291 TLN1 Talin-1 yes yes 2 1.2293E-07 164.13 By MS/MS 2.5 0.5 1 1 2 562980 562980 0 14566 2947 15459 36948;36949 26060;26061 26060 1697 2 21918 0 VAGTQACATETIDTSR GHWANQLAAVAAGARVAGTQACATETIDTS AGTQACATETIDTSRVSLRAPQEFMTSHSE R V A S R V 3 1 0 1 1 1 1 1 0 1 0 0 0 0 0 1 4 0 0 1 0 0 16 0 1679.7785 Q9BRR6 Q9BRR6 409 424 ADPGK ADP-dependent glucokinase yes yes 2 8.1141E-29 239.38 By MS/MS 5.5 0.5 1 1 2 3197700 3197700 0 14567 2327 15460 36950;36951 26062 26062 1 27155 0 VAGYAALLEQYQK KGEESNSSANKCLLKVAGYAALLEQYQKAI LKVAGYAALLEQYQKAIDIYEQVGTNAMDS K V A Q K A 3 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 2 1 0 0 13 0 1452.7613 P54920 P54920 168 180 NAPA Alpha-soluble NSF attachment protein yes yes 2 1.4594E-11 197.21 By MS/MS 8 0 1 1 1675800 1675800 0 14568 1020 15461 36952 26063 26063 1 110550 0 VAHEHKEK PQKPALIPQPTFTEKVAHEHKEKKYEMDFG QPTFTEKVAHEHKEKKYEMDFGIWKGHLDA K V A E K K 1 0 0 0 0 0 2 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 8 1 976.50903 P57740 P57740 786 793 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.052147 143.89 By MS/MS 4.5 0.5 1 1 2 42820 42820 0 14569 1057 15462 36953;36954 26064 26064 1 1223.5 0 VAIEHLDK IHPIRIADGYEQAARVAIEHLDKISDSVLV GYEQAARVAIEHLDKISDSVLVDIKDTEPL R V A D K I 1 0 0 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 923.50763 P48643 P48643 143 150 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.00063109 183.74 By MS/MS By matching 6 0 2 1 1 22678000 22649000 28998 14570 909 15463 36955;36956 26065 26065 1 176610 88933 VAIEHLDKISDSVLVDIKDTEPLIQTAK IHPIRIADGYEQAARVAIEHLDKISDSVLV LVDIKDTEPLIQTAKTTLGSKVVNSCHRQM R V A A K T 2 0 0 4 0 1 2 0 1 4 3 3 0 0 1 2 2 0 0 3 0 0 28 2 3089.686 P48643 P48643 143 170 CCT5 T-complex protein 1 subunit epsilon yes yes 4;5 0.00012061 74.287 By MS/MS 6 0 2 2 8218500 8218500 0 14571 909 15464 36957;36958 26066;26067 26066 2 64088 0 VAIQFLK PSIHFCITLLHARKRVAIQFLKDIRESVTQ TLLHARKRVAIQFLKDIRESVTQIMKNPKA R V A L K D 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 7 0 817.50617 O95470 O95470 496 502 SGPL1 Sphingosine-1-phosphate lyase 1 yes yes 2 0.021413 122.5 By MS/MS 6 0 1 1 1562600 1562600 0 14572 395 15465 36959 26068 26068 1 12185 0 VAISNPPQR VMKMDGMTIKENIIKVAISNPPQRKVPEKP KENIIKVAISNPPQRKVPEKPETRKAPGGP K V A Q R K 1 1 1 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 980.54033 Q15020 Q15020 873 881 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 2 0.0014005 136.27 By MS/MS 3 0 1 1 1652700 1652700 0 14573 1463 15466 36960 26069 26069 1 43144 0 VAIVGGSGSGK KVLSGISFEVPAGKKVAIVGGSGSGKSTIV AGKKVAIVGGSGSGKSTIVRLLFRFYEPQK K V A G K S 1 0 0 0 0 0 0 4 0 1 0 1 0 0 0 2 0 0 0 2 0 0 11 0 930.51345 O75027 O75027 501 511 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.037686 79.986 By MS/MS 1.5 0.5 1 1 2 637680 637680 0 14574 276 15467 36961;36962 26070 26070 1 31345 0 VALDLDPYVK DNLATELCRINEDQKVALDLDPYVKKLLNA NEDQKVALDLDPYVKKLLNARRRVVLVNNI K V A V K K 1 0 0 2 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 10 0 1131.6176 O95295 O95295 74 83 SNAPIN SNARE-associated protein Snapin yes yes 2 0.0096415 104.2 By MS/MS 10 0 1 1 223920 223920 0 14575 382 15468 36963 26071 26071 1 238000 0 VALDMTTLTIMR CRRQLDKSKLKPGTRVALDMTTLTIMRYLP GTRVALDMTTLTIMRYLPREVDPLVYNMSH R V A M R Y 1 1 0 1 0 0 0 0 0 1 2 0 2 0 0 0 3 0 0 1 0 0 12 0 1363.7203 P62333 P62333 98 109 PSMC6 26S protease regulatory subunit 10B yes yes 2 2.1899E-05 169.93 By MS/MS 8.2 1.17 2 1 1 1 5 7824300 7824300 0 14576 1133 15469;15470 36964;36965;36966;36967;36968 26072;26073;26074 26074 887;888 3 358120 0 VALEFGSEEPR RGNQSGRSPNNPFSRVALEFGSEEPRHSEA PFSRVALEFGSEEPRHSEAADSPRSSTVHI R V A P R H 1 1 0 0 0 0 3 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 11 0 1232.6037 Q9UNY4 Q9UNY4 891 901 TTF2 Transcription termination factor 2 yes yes 2 0.0011893 131.12 By MS/MS 4 0.816 1 1 1 3 2046100 2046100 0 14577 2848 15471 36969;36970;36971 26075 26075 1 56233 0 VALEIFQHSK IYKDLPFETLEVEAKVALEIFQHSKYKVDF EVEAKVALEIFQHSKYKVDFIEEKASQNPE K V A S K Y 1 0 0 0 0 1 1 0 1 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1170.6397 Q9NYK5 Q9NYK5 225 234 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 2.6298E-07 192.26 By MS/MS 8 0.816 1 1 1 3 5124600 5124600 0 14578 2696 15472 36972;36973;36974 26076 26076 1 390310 0 VALENDDRSEEEKYTAVQR QLAEEIESSAQYKARVALENDDRSEEEKYT NDDRSEEEKYTAVQRNSSEREGHSINTREN R V A Q R N 2 2 1 2 0 1 4 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 19 2 2251.0717 Q99700 Q99700 458 476 ATXN2 Ataxin-2 yes yes 3 0.042562 58.577 By MS/MS 3 0 1 1 1120600 1120600 0 14579 2283 15473 36975 26077 26077 1 29253 0 VALIGFPSVGK SKGEGFDVMKSGDARVALIGFPSVGKSTFL GDARVALIGFPSVGKSTFLSLMTSTASEAA R V A G K S 1 0 0 0 0 0 0 2 0 1 1 1 0 1 1 1 0 0 0 2 0 0 11 0 1086.6437 P55039 P55039 65 75 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 2 0.029449 96.331 By MS/MS 7 0 1 1 785740 785740 0 14580 1024 15474 36976 26078 26078 1 14041 0 VALILQNVDLPN HNGRPYSLLVYIPSRVALILQNVDLPN___ PSRVALILQNVDLPN_______________ R V A P N - 1 0 2 1 0 1 0 0 0 1 3 0 0 0 1 0 0 0 0 2 0 0 12 0 1307.7449 Q04446 Q04446 691 702 GBE1 1,4-alpha-glucan-branching enzyme yes yes 2 3.2802E-05 169.76 By MS/MS 5 0 1 1 692630 692630 0 14581 1263 15475 36977 26079 26079 1 28470 0 VALLCGPPGLGK MLEAGLDPSQRPKQKVALLCGPPGLGKTTL KQKVALLCGPPGLGKTTLAHVIARHAGYSV K V A G K T 1 0 0 0 1 0 0 3 0 0 3 1 0 0 2 0 0 0 0 1 0 0 12 0 1180.6638 Q8WVB6 Q8WVB6 369 380 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.0059187 101.6 By MS/MS 4.5 0.5 1 1 2 1313300 1313300 0 14582 2027 15476 36978;36979 26080 26080 1 38957 0 VALLDFGATR DPNWSNFFYDPQQHKVALLDFGATREYDRS PQQHKVALLDFGATREYDRSFTDLYIQIIR K V A T R E 2 1 0 1 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1061.5869 Q8NI60 Q8NI60 503 512 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 2 0.00016818 157.96 By MS/MS 8 1.41 1 1 1 1 1 5 10303000 10303000 0 14583 1978 15477 36980;36981;36982;36983;36984 26081;26082;26083;26084 26084 4 395320 0 VALLDVFR SQKVELSESRLKAFKVALLDVFREAHAQSI SRLKAFKVALLDVFREAHAQSIGMNRLTES K V A F R E 1 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 2 0 0 8 0 931.5491 P25205 P25205 749 756 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.018258 109.01 By MS/MS 5 1.41 1 1 1 1 1 5 3273800 3273800 0 14584 683 15478 36985;36986;36987;36988;36989 26085;26086;26087 26085 3 82739 0 VALLLLEK RTVALLTEKKADVEKVALLLLEKEVLDKND KKADVEKVALLLLEKEVLDKNDMVELLGPR K V A E K E 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 8 0 897.5899 Q9Y4W6;Q01484 Q9Y4W6 726 733 AFG3L2;ANK2 AFG3-like protein 2;Ankyrin-2 yes no 2 0.023897 113.5 By MS/MS 6 0.816 1 1 1 3 896260 896260 0 14585 2960 15479 36990;36991;36992 26088 26088 1 25550 0 VALQDLQTNSK QVTRAVLGDDPQLMKVALQDLQTNSKIGAL QLMKVALQDLQTNSKIGALLPYFVYVVSGV K V A S K I 1 0 1 1 0 2 0 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 11 0 1215.6459 Q9Y6J9 Q9Y6J9 178 188 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 2 0.0066863 101.35 By MS/MS By matching 4.33 0.471 2 1 2 1 1768900 1731200 37683 14586 3008 15480 36993;36994;36995 26089 26089 1 60945 78742 VALRNDSYTLHK VDKNIDINDVTPNCRVALRNDSYTLHKILP NCRVALRNDSYTLHKILPNKVDPLVSLMMV R V A H K I 1 1 1 1 0 0 0 0 1 0 2 1 0 0 0 1 1 0 1 1 0 0 12 1 1415.7521 P62195 P62195 114 125 PSMC5 26S protease regulatory subunit 8 yes yes 3 0.036067 87.831 By MS/MS 7 0 1 1 5923300 5923300 0 14587 1117 15481 36996 26090 26090 1 105850 0 VALSEPQPER AEIISLCKRYPGFMRVALSEPQPERRFFRR PGFMRVALSEPQPERRFFRRGWVTFDRSVN R V A E R R 1 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 10 0 1124.5826 Q9BXP5 Q9BXP5 450 459 SRRT Serrate RNA effector molecule homolog yes yes 2 0.00093084 126.07 By MS/MS 3.5 0.5 1 1 2 1819400 1819400 0 14588 2402 15482 36997;36998 26091 26091 1 49131 0 VALSPAGVQNLVK LTVGVPKEIFQNEKRVALSPAGVQNLVKQG KRVALSPAGVQNLVKQGFNVVVESGAGEAS R V A V K Q 2 0 1 0 0 1 0 1 0 0 2 1 0 0 1 1 0 0 0 3 0 0 13 0 1294.7609 Q13423 Q13423 72 84 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.054279 66.56 By MS/MS 2 0.816 1 1 1 3 1221900 1221900 0 14589 1367 15483 36999;37000;37001 26092 26092 1 55493 0 VALTGLTVAEYFR LVYGQMNEPPGARARVALTGLTVAEYFRDQ ARVALTGLTVAEYFRDQEGQDVLLFIDNIF R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 P06576 P06576 282 294 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 1.0829E-34 257.72 By MS/MS 6 0 1 1 10721000 10721000 0 14590 478 15484 37002 26093;26094 26094 2 83603 0 VALVGPNGAGK CIYNNLEFGIDLDTRVALVGPNGAGKSTLL LDTRVALVGPNGAGKSTLLKLLTGELLPTD R V A G K S 2 0 1 0 0 0 0 3 0 0 1 1 0 0 1 0 0 0 0 2 0 0 11 0 981.56073 Q9UG63 Q9UG63 426 436 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.027236 85.161 By MS/MS 5 0 1 1 1004800 1004800 0 14591 2771 15485 37003 26095 26095 1 41301 0 VALVNDSLSDVTSTTSSR DVQATGRIADDADPRVALVNDSLSDVTSTT VNDSLSDVTSTTSSRVDDHDSEEICLDHLC R V A S R V 1 1 1 2 0 0 0 0 0 0 2 0 0 0 0 5 3 0 0 3 0 0 18 0 1850.9222 Q7Z2W4 Q7Z2W4 486 503 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 2 2.3405E-33 279.71 By MS/MS 5 1.41 1 1 1 1 1 5 7807300 7807300 0 14592 1777 15486 37004;37005;37006;37007;37008 26096;26097 26097 2 200710 0 VALVYGQMNEPPGAR MIESGVINLKDATSKVALVYGQMNEPPGAR VALVYGQMNEPPGARARVALTGLTVAEYFR K V A A R A 2 1 1 0 0 1 1 2 0 0 1 0 1 0 2 0 0 0 1 2 0 0 15 0 1600.8032 P06576 P06576 265 279 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 1.1856E-09 176.87 By MS/MS By MS/MS 6.6 0.8 3 1 1 4 1 50738000 50426000 311930 14593 478 15487;15488 37009;37010;37011;37012;37013 26098;26099;26100;26101;26102;26103;26104;26105 26105 273 8 503450 956670 VAMGAFDK VPKENVLIGDGAGFKVAMGAFDKTRPVVAA GDGAGFKVAMGAFDKTRPVVAAGAVGLAQR K V A D K T 2 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 8 0 837.40547 P11310 P11310 272 279 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.0061671 122.13 By MS/MS 6.5 0.5 1 1 2 2499700 2499700 0 14594 552 15489 37014;37015 26106 26106 347 1 27456 0 VAMHLVCPSR LAYALSSHCPDMRARVAMHLVCPSRYEAAV DMRARVAMHLVCPSRYEAAVPDPREPGEFA R V A S R Y 1 1 0 0 1 0 0 0 1 0 1 0 1 0 1 1 0 0 0 2 0 0 10 0 1168.5845 O43505 O43505 153 162 B4GAT1 Beta-1,4-glucuronyltransferase 1 yes yes 3 0.026501 85.862 By MS/MS 6 0 1 1 0 0 0 14595 205 15490 37016 26107 26107 1 0 0 VANEAEFILSR EGRLLSQTMKDHLVRVANEAEFILSRQRAE HLVRVANEAEFILSRQRAEDIHRHAEFESL R V A S R Q 2 1 1 0 0 0 2 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 11 0 1247.651 P50851 P50851 1895 1905 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 2 0.00012481 167.11 By MS/MS 1 0 1 1 0 0 0 14596 952 15491 37017 26108 26108 1 0 0 VANPSGNLTETYVQDR ARALTQTGGPHVKARVANPSGNLTETYVQD ANPSGNLTETYVQDRGDGMYKVEYTPYEEG R V A D R G 1 1 2 1 0 1 1 1 0 0 1 0 0 0 1 1 2 0 1 2 0 0 16 0 1762.8486 P21333 P21333 1297 1312 FLNA Filamin-A yes yes 2 1.3318E-63 302.2 By MS/MS 2.5 1.12 1 1 1 1 4 5204800 5204800 0 14597 648 15492 37018;37019;37020;37021 26109;26110;26111;26112 26111 4 210020 0 VANVELYYR TDAWKEGQFKDIITKVANVELYYRAIQFYL KDIITKVANVELYYRAIQFYLEFKPLLLND K V A Y R A 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 2 0 0 9 0 1125.5819 Q00610 Q00610 1398 1406 CLTC Clathrin heavy chain 1 yes yes 2 0.0043537 133.13 By MS/MS 3 1.41 1 1 1 1 1 5 2075300 2075300 0 14598 1235 15493 37022;37023;37024;37025;37026 26113;26114 26113 2 63435 0 VANVSLLALYK HAVGDIPGVRFKVVKVANVSLLALYKGKKE KVVKVANVSLLALYKGKKERPRS_______ K V A Y K G 2 0 1 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 2 0 0 11 0 1189.7071 P62266 P62266 125 135 RPS23 40S ribosomal protein S23 yes yes 2 9.1767E-07 179.42 By MS/MS 9.5 0.5 1 1 2 1987700 1987700 0 14599 1123 15494 37027;37028 26115;26116 26115 2 1958200 0 VAPAQPSEEGPGR SSDTEQQSPTSGGGKVAPAQPSEEGPGRKD GKVAPAQPSEEGPGRKDENKVDGMNAPKGQ K V A G R K 2 1 0 0 0 1 2 2 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1293.6313 P23588 P23588 512 524 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0073225 98.898 By MS/MS 5 0 1 1 3720400 3720400 0 14600 672 15495 37029 26117 26117 1 152920 0 VAPDEHPILLTEAPLNPK DMEKIWYHTFYNELRVAPDEHPILLTEAPL DEHPILLTEAPLNPKINREKMTQIMFEAFN R V A P K I 2 0 1 1 0 0 2 0 1 1 3 1 0 0 4 0 1 0 0 1 0 0 18 0 1953.0571 Q562R1 Q562R1 97 114 ACTBL2 Beta-actin-like protein 2 yes yes 3 0.041711 58.461 By MS/MS 8 0 1 1 1366700 1366700 0 14601 1593 15496 37030 26118 26118 1 90158 0 VAPEEHPVLLTEAPLNPK DMEKIWHHTFYNELRVAPEEHPVLLTEAPL EEHPVLLTEAPLNPKANREKMTQIMFETFN R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 0 18 0 1953.0571 P60709;P63261 P60709 96 113 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 2;3 0.00085713 137.84 By MS/MS By matching 7.5 1.32 2 3 1 1 1 6 2 105750000 105650000 104150 14602 1072;1179 15497 37031;37032;37033;37034;37035;37036;37037;37038 26119;26120 26120 2 2162500 386910 VAPPGLTQIPQIQK MLLTISEFKPTYQDRVAPPGLTQIPQIQKT RVAPPGLTQIPQIQKTEISFRPNDPKSYEA R V A Q K T 1 0 0 0 0 3 0 1 0 2 1 1 0 0 3 0 1 0 0 1 0 0 14 0 1488.8664 P05026 P05026 72 85 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 2 0.0056955 101.35 By MS/MS 6.5 0.5 1 1 2 12677000 12677000 0 14603 464 15498 37039;37040 26121;26122 26121 2 115850 0 VAPSAVLGPNVSIGK GPWIRGNVYIHPTAKVAPSAVLGPNVSIGK VAPSAVLGPNVSIGKGVTVGEGVRLRESIV K V A G K G 2 0 1 0 0 0 0 2 0 1 1 1 0 0 2 2 0 0 0 3 0 0 15 0 1407.8086 Q96IJ6 Q96IJ6 295 309 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 2 1.3868E-05 144.28 By MS/MS 7 0 1 1 1860400 1860400 0 14604 2202 15499 37041 26123 26123 1 33245 0 VAQDLCK GGEVSCLVAGTKCDKVAQDLCKVAGIAKVL VAGTKCDKVAQDLCKVAGIAKVLVAQHDVY K V A C K V 1 0 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 832.41129 P13804 P13804 63 69 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.041051 107.32 By MS/MS 8 0 1 1 1203200 1203200 0 14605 582 15500 37042 26124 26124 1 79374 0 VAQFLVIYAPR KADFSPFGNSQGPSRVAQFLVIYAPRRGIL GPSRVAQFLVIYAPRRGILEVWSTQQGPRV R V A P R R 2 1 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 11 0 1275.7339 Q9H2M9 Q9H2M9 461 471 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.00011626 159.37 By MS/MS 3.5 0.5 1 1 2 253890 253890 0 14606 2481 15501 37043;37044 26125 26125 1 6657.8 0 VAQGVSGAVQDK LSSQNRYFSEADKIKVAQGVSGAVQDKGSI KIKVAQGVSGAVQDKGSIHKFVPYLIAGIQ K V A D K G 2 0 0 1 0 2 0 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 12 0 1157.6041 P12268 P12268 439 450 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 4.6964E-07 181.66 By MS/MS 6 0 1 1 26957000 26957000 0 14607 564 15502 37045 26126 26126 1 210210 0 VAQILKEPK SKQNKLEQVEKELLRVAQILKEPKVAASVL EKELLRVAQILKEPKVAASVLNPYVKRSIK R V A P K V 1 0 0 0 0 1 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 0 9 1 1024.6281 P48047 P48047 65 73 ATP5O ATP synthase subunit O, mitochondrial yes yes 2;3 2.9382E-05 181.41 By MS/MS By matching 9.4 0.49 3 2 4 1 32898000 32797000 100540 14608 900 15503 37046;37047;37048;37049;37050 26127;26128 26127 2 18915000 1083500 VAQIQNAGLGEFR AEKWRRQIIGEISKKVAQIQNAGLGEFRIR KKVAQIQNAGLGEFRIRDLNDEINKLLREK K V A F R I 2 1 1 0 0 2 1 2 0 1 1 0 0 1 0 0 0 0 0 1 0 0 13 0 1401.7365 Q9ULR0 Q9ULR0 57 69 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 2 2.4396E-07 176.78 By MS/MS 7 0 1 1 1503100 1503100 0 14609 2825 15504 37051 26129 26129 1 26861 0 VAQKREDAVSK VAFAYKNVKFVLKHKVAQKREDAVSKEVTR LKHKVAQKREDAVSKEVTRKLSEADNRKMS K V A S K E 2 1 0 1 0 1 1 0 0 0 0 2 0 0 0 1 0 0 0 2 0 0 11 2 1229.6728 Q9UNL2 Q9UNL2 88 98 SSR3 Translocon-associated protein subunit gamma yes yes 2;3 0.0030799 139.32 By MS/MS By matching 9 0 3 2 1 1279500 1275900 3561.3 14610 2844 15505 37052;37053;37054 26130;26131 26130 2 732260 38381 VAQNSIR GAAFFNEVRNAVFGKVAQNSIRRIAKNVFL VRNAVFGKVAQNSIRRIAKNVFLHLHNLDL K V A I R R 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 7 0 786.4348 O75027 O75027 217 223 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 0.018801 129.68 By MS/MS 1.5 0.5 1 1 2 405660 405660 0 14611 276 15506 37055;37056 26132;26133 26132 2 19928 0 VAQPGPLEPEEPR GQEPLHNEELAGAGRVAQPGPLEPEEPRAG GRVAQPGPLEPEEPRAGGRPRRRRDLGSRL R V A P R A 1 1 0 0 0 1 3 1 0 0 1 0 0 0 4 0 0 0 0 1 0 0 13 0 1417.7201 Q96HY6 Q96HY6 47 59 DDRGK1 DDRGK domain-containing protein 1 yes yes 2 0.036707 78.342 By MS/MS By matching 7 0 2 1 1 12871000 12834000 37236 14612 2197 15507 37057;37058 26134 26134 1 229350 152860 VAQPTITDNK KKGEITGEVRMPSGKVAQPTITDNKDGTVT MPSGKVAQPTITDNKDGTVTVRYAPSEAGL K V A N K D 1 0 1 1 0 1 0 0 0 1 0 1 0 0 1 0 2 0 0 1 0 0 10 0 1085.5717 P21333 P21333 1815 1824 FLNA Filamin-A yes yes 2 0.030067 85.355 By MS/MS 2 0 1 1 968110 968110 0 14613 648 15508 37059 26135 26135 1 48120 0 VAQVLEGFITR QVEVFRRQDAQRGMRVAQVLEGFITRKVVK RGMRVAQVLEGFITRKVVKQTVMTVVYGVT R V A T R K 1 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 11 0 1231.6925 O00411 O00411 977 987 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 1.7906E-07 192.44 By MS/MS 4 0.816 1 1 1 3 11020000 11020000 0 14614 92 15509 37060;37061;37062 26136;26137 26136 2 290230 0 VAREEGLR GQRRNYAHALDGLYRVAREEGLRRLFSGAT ALDGLYRVAREEGLRRLFSGATMASSRGAL R V A L R R 1 2 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 1 928.50903 Q9UBX3 Q9UBX3 151 158 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 0.012885 174.27 By MS/MS 6.17 3.34 1 1 2 2 6 4520100 4520100 0 14615 2761 15510 37063;37064;37065;37066;37067;37068 26138;26139;26140 26139 3 379020 0 VARPPPIGAEVPDVTATPAR AGASPPSTLTPDSRRVARPPPIGAEVPDVT PIGAEVPDVTATPARLLFFAPTRRAAPLEE R V A A R L 4 2 0 1 0 0 1 1 0 1 0 0 0 0 5 0 2 0 0 3 0 0 20 1 2013.1007 Q07820 Q07820 76 95 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 yes yes 3 0.003024 78.456 By MS/MS 7 0 1 1 1632000 1632000 0 14616 1282 15511 37069 26141 26141 1 29163 0 VASLEEVPFAAASIGQVHQGLLR LRVLEEELGRDWQAKVASLEEVPFAAASIG FAAASIGQVHQGLLRDGTEVAVKIQYPGIA K V A L R D 4 1 0 0 0 2 2 2 1 1 3 0 0 1 1 2 0 0 0 3 0 0 23 0 2391.291 Q96D53 Q96D53 207 229 ADCK4 AarF domain-containing protein kinase 4 yes yes 3 0.00014291 89.483 By MS/MS 6 0 1 1 3903300 3903300 0 14617 2147 15512 37070 26142 26142 1 30438 0 VASPDAVTTITSSK VGATFPEGVGQLLNKVASPDAVTTITSSKL KVASPDAVTTITSSKLHCIMPHVKQTFLRL K V A S K L 2 0 0 1 0 0 0 0 0 1 0 1 0 0 1 3 3 0 0 2 0 0 14 0 1375.7195 Q9NUL7 Q9NUL7 344 357 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 0.0041697 107.53 By MS/MS 6 0 1 1 14263000 14263000 0 14618 2638 15513 37071 26143 26143 1 111230 0 VASQGEVVR PAGLETPEAKVLFDKVASQGEVVRKLKTEK KVLFDKVASQGEVVRKLKTEKAPKDQVDIA K V A V R K 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 3 0 0 9 0 943.50869 P07814 P07814 908 916 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0006374 150.27 By MS/MS 3 0.816 1 1 1 3 3740800 3740800 0 14619 493 15514 37072;37073;37074 26144;26145 26144 2 100240 0 VASQGEVVRK PAGLETPEAKVLFDKVASQGEVVRKLKTEK VLFDKVASQGEVVRKLKTEKAPKDQVDIAV K V A R K L 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 0 3 0 0 10 1 1071.6037 P07814 P07814 908 917 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0019667 144.65 By MS/MS 3 0 1 1 845280 845280 0 14620 493 15515 37075 26146 26146 1 22066 0 VASSTLLDDRR PQHTEAETIQKLCDRVASSTLLDDRRNAVR LCDRVASSTLLDDRRNAVRALKSLSKKYRL R V A R R N 1 2 0 2 0 0 0 0 0 0 2 0 0 0 0 2 1 0 0 1 0 0 11 1 1231.6521 O60763 O60763 30 40 USO1 General vesicular transport factor p115 yes yes 3 0.037328 73.887 By MS/MS 4 0 1 1 786460 786460 0 14621 264 15516 37076 26147 26147 1 21469 0 VATAQDDITGDGTTSNVLIIGELLK HEMQIQHPTASLIAKVATAQDDITGDGTTS DGTTSNVLIIGELLKQADLYISEGLHPRII K V A L K Q 2 0 1 3 0 1 1 3 0 3 3 1 0 0 0 1 4 0 0 2 0 0 25 0 2543.333 P40227 P40227 80 104 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 7.7186E-23 184.2 By MS/MS 6 0.577 1 4 1 6 125070000 125070000 0 14622 828 15517 37077;37078;37079;37080;37081;37082 26148;26149;26150;26151;26152;26153 26148 6 977350 0 VATFHDCEDAAR LVSAGCYALGTVGYRVATFHDCEDAARELQ GYRVATFHDCEDAARELQSQIQEARADLAR R V A A R E 3 1 0 2 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 1 0 0 12 0 1390.5936 Q9P2X0 Q9P2X0 61 72 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 yes yes 2;3 0.0015096 127.51 By MS/MS 10 0 2 2 1626200 1626200 0 14623 2743 15518 37083;37084 26154;26155 26155 2 1728500 0 VATGQELSNNILDTVFK AHRPVRLAEFKRAVKVATGQELSNNILDTV TGQELSNNILDTVFKIFDLDGDECLSHEEF K V A F K I 1 0 2 1 0 1 1 1 0 1 2 1 0 1 0 1 2 0 0 2 0 0 17 0 1847.9629 Q8IYU8 Q8IYU8 356 372 MICU2 Calcium uptake protein 2, mitochondrial yes yes 2 3.0823E-43 255.39 By MS/MS 6 0 1 1 524940 524940 0 14624 1883 15519 37085 26156 26156 1 4093.5 0 VATLNSEEESDPPTYK SFAEHRSGLVPQQIKVATLNSEEESDPPTY ATLNSEEESDPPTYKDAFPPLPEKAACLES K V A Y K D 1 0 1 1 0 0 3 0 0 0 1 1 0 0 2 2 2 0 1 1 0 0 16 0 1778.821 Q00341 Q00341 26 41 HDLBP Vigilin yes yes 2 4.9316E-109 348.78 By MS/MS 3 0 1 1 1106400 1106400 0 14625 1231 15520 37086 26157 26157 1 28884 0 VATLNSEEESDPPTYKDAFPPLPEK SFAEHRSGLVPQQIKVATLNSEEESDPPTY DPPTYKDAFPPLPEKAACLESAQEPSGAWG K V A E K A 2 0 1 2 0 0 4 0 0 0 2 2 0 1 5 2 2 0 1 1 0 0 25 1 2773.3334 Q00341 Q00341 26 50 HDLBP Vigilin yes yes 3 0.00055646 81.808 By MS/MS 4 0.816 1 1 1 3 3023900 3023900 0 14626 1231 15521 37087;37088;37089 26158 26158 1 80208 0 VATNPSFDGR FSNLGCFLLPHPGLKVATNPSFDGRLKDID HPGLKVATNPSFDGRLKDIDEDFKRELRNL K V A G R L 1 1 1 1 0 0 0 1 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 Q8NHH9 Q8NHH9 303 312 ATL2 Atlastin-2 yes yes 2 0.00099784 122.96 By MS/MS 6.5 0.5 1 1 2 5627600 5627600 0 14627 1975 15522 37090;37091 26159 26159 1 44404 0 VATQAVEDVLNIAK CTGTGSKAWSFNINRVATQAVEDVLNIAKR RVATQAVEDVLNIAKRQGNLSLPLNRELVE R V A A K R 3 0 1 1 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 3 0 0 14 0 1469.809 Q4G0N4 Q4G0N4 326 339 NADK2 NAD kinase 2, mitochondrial yes yes 2 7.8234E-09 194.06 By MS/MS 7 0 1 1 485040 485040 0 14628 1577 15523 37092 26160 26160 1 8667.7 0 VATVSLPR IMLIKLSSPATLNSRVATVSLPRSCAAAGT PATLNSRVATVSLPRSCAAAGTECLISGWG R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 7.462E-05 176.41 By MS/MS By MS/MS 5.61 2.54 4 3 5 8 6 5 9 6 5 3 14 40 10616000000 5501800000 5114600000 + 14629 33 15524 37093;37094;37095;37096;37097;37098;37099;37100;37101;37102;37103;37104;37105;37106;37107;37108;37109;37110;37111;37112;37113;37114;37115;37116;37117;37118;37119;37120;37121;37122;37123;37124;37125;37126;37127;37128;37129;37130;37131;37132;37133;37134;37135;37136;37137;37138;37139;37140;37141;37142;37143;37144;37145;37146 26161;26162;26163;26164;26165;26166;26167;26168;26169;26170;26171;26172;26173;26174;26175;26176;26177;26178;26179;26180;26181;26182;26183;26184;26185;26186;26187;26188;26189;26190;26191;26192;26193;26194;26195;26196;26197;26198;26199;26200;26201;26202;26203;26204;26205;26206;26207;26208;26209;26210;26211;26212;26213;26214;26215;26216;26217;26218;26219;26220;26221;26222;26223;26224;26225;26226;26227;26228;26229;26230;26231;26232;26233;26234;26235;26236;26237;26238;26239;26240;26241;26242;26243;26244;26245;26246;26247;26248;26249;26250;26251;26252;26253;26254;26255;26256;26257;26258 26203 98 918170000 33085000000 VATWVDETLSSVASK SANSIRATVATENNKVATWVDETLSSVASK VATWVDETLSSVASKLEHTAQTYSELQGER K V A S K L 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 3 2 1 0 3 0 0 15 0 1591.8094 O95071 O95071 443 457 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 1.0284E-09 179.35 By MS/MS 2 0.816 1 1 1 3 511920 511920 0 14630 364 15525 37147;37148;37149 26259 26259 1 16465 0 VAVATILEK LIKIFLLECNVREVRVAVATILEKTLDSAL NVREVRVAVATILEKTLDSALFYQDKLKSL R V A E K T 2 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 9 0 942.57498 Q9UPU5 Q9UPU5 2236 2244 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.026353 93.143 By MS/MS 1.5 0.5 1 1 2 648810 648810 0 14631 2854 15526 37150;37151 26260 26260 1 32136 0 VAVEAKNPADLPK HNMRVMKFSVSPVVRVAVEAKNPADLPKLV VRVAVEAKNPADLPKLVEGLKRLAKSDPMV R V A P K L 3 0 1 1 0 0 1 0 0 0 1 2 0 0 2 0 0 0 0 2 0 0 13 1 1350.7507 P13639 P13639 507 519 EEF2 Elongation factor 2 yes yes 2;3 0.0030489 130.44 By MS/MS 4.75 0.829 2 1 1 4 7074600 7074600 0 14632 576 15527 37152;37153;37154;37155 26261;26262 26261 2 173800 0 VAVEYLDPSPEVQK FPNKQGYVLSSIEGRVAVEYLDPSPEVQKK RVAVEYLDPSPEVQKKKYAFKCHRLKENNI R V A Q K K 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 1 0 0 1 3 0 0 14 0 1572.8035 O43684 O43684 203 216 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0002865 136.96 By MS/MS 8 0.816 1 1 1 3 7169700 7169700 0 14633 216 15528 37156;37157;37158 26263;26264 26263 2 430890 0 VAVFTENASEVK SVLSLPYPFASEINKVAVFTENASEVKIAE INKVAVFTENASEVKIAEENGAAFAGGTSL K V A V K I 2 0 1 0 0 0 2 0 0 0 0 1 0 1 0 1 1 0 0 3 0 0 12 0 1292.6612 Q9BYD6 Q9BYD6 157 168 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 2 8.3302E-11 197.21 By MS/MS By matching 8 0 2 1 1 7328500 7248500 79931 14634 2415 15529 37159;37160 26265 26265 1 478180 681910 VAVGELTDEDVK ATVILANHVAKKDNKVAVGELTDEDVKMIT DNKVAVGELTDEDVKMITSLSKDQQIGEKI K V A V K M 1 0 0 2 0 0 2 1 0 0 1 1 0 0 0 0 1 0 0 3 0 0 12 0 1273.6402 P49736 P49736 451 462 MCM2 DNA replication licensing factor MCM2 yes yes 2 4.4436E-07 197.79 By MS/MS By matching 4 0.707 1 2 1 3 1 10680000 10641000 39745 14635 928 15530 37161;37162;37163;37164 26266;26267;26268 26266 3 299590 83049 VAVLQALASTVNR GIEEVVIPKKKTWDKVAVLQALASTVNRDT DKVAVLQALASTVNRDTTAVPYVFQDDPYL K V A N R D 3 1 1 0 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 13 0 1340.7776 Q96EY7 Q96EY7 68 80 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 8.4679E-17 203.03 By MS/MS 5 0 1 1 0 0 0 14636 2170 15531 37165 26269 26269 1 0 0 VAVQAISADEEAPDYGSGVR VAIVSEKGEVKGFLRVAVQAISADEEAPDY ISADEEAPDYGSGVRQSGTAKISFDDQHFE R V A V R Q 4 1 0 2 0 1 2 2 0 1 0 0 0 0 1 2 0 0 1 3 0 0 20 0 2032.9702 Q12756 Q12756 885 904 KIF1A Kinesin-like protein KIF1A yes yes 2 3.0316E-12 161.48 By MS/MS 2.5 1.12 1 1 1 1 4 2492000 2492000 0 14637 1302 15532 37166;37167;37168;37169 26270;26271;26272 26272 3 92426 0 VAVQGDVVR NNCTTSEDSLVLYNRVAVQGDVVRELKAKK LVLYNRVAVQGDVVRELKAKKAPKEDVDAA R V A V R E 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 9 0 941.52943 P07814 P07814 757 765 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0014522 135.71 By MS/MS By matching 3.8 0.748 2 2 1 3 2 19386000 19259000 126740 14638 493 15533 37170;37171;37172;37173;37174 26273;26274 26274 2 511050 211230 VAVTEGCQPSR EVTYDDVPIPNSPFKVAVTEGCQPSRVQAQ SPFKVAVTEGCQPSRVQAQGPGLKEAFTNK K V A S R V 1 1 0 0 1 1 1 1 0 0 0 0 0 0 1 1 1 0 0 2 0 0 11 0 1202.5714 O75369 O75369 1320 1330 FLNB Filamin-B yes yes 2 1.0225E-05 173.64 By MS/MS 2 0 1 1 0 0 0 14639 300 15534 37175 26275 26275 1 0 0 VAVVAGYGDVGK IDGIKRATDVMIAGKVAVVAGYGDVGKGCA AGKVAVVAGYGDVGKGCAQALRGFGARVII K V A G K G 2 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 0 0 1 4 0 0 12 0 1133.6081 P23526 P23526 215 226 AHCY Adenosylhomocysteinase yes yes 2 0.00046588 140.17 By MS/MS 7 0 1 1 4069700 4069700 0 14640 670 15535 37176 26276;26277 26276 2 72727 0 VAVVCSSNQNR ______________________________ SPLRVAVVCSSNQNRSMEAHNILSKRGFSV R V A N R S 1 1 2 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 11 0 1232.5932 Q9NP77 Q9NP77 8 18 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes yes 2 0.00043323 145.46 By MS/MS 9 0 1 1 474060 474060 0 14641 2574 15536 37177 26278 26278 1 272070 0 VAYPQADSNLR GIRTVIIRQHEIVLKVAYPQADSNLRNIVT IVLKVAYPQADSNLRNIVTEQLVALIDCFL K V A L R N 2 1 1 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 11 0 1232.6149 Q8WUM0 Q8WUM0 788 798 NUP133 Nuclear pore complex protein Nup133 yes yes 2 0.043331 78.488 By MS/MS 3.5 1.12 1 1 1 1 4 1946200 1946200 0 14642 2018 15537 37178;37179;37180;37181 26279 26279 1 55822 0 VCAASLYVLGTATR QALASVAIPGFTINRVCAASLYVLGTATRW RVCAASLYVLGTATRWPLAVRKWTTTALGL R V C T R W 3 1 0 0 1 0 0 1 0 0 2 0 0 0 0 1 2 0 1 2 0 0 14 0 1480.7708 Q9UDX5 Q9UDX5 103 116 MTFP1 Mitochondrial fission process protein 1 yes yes 2 2.5513E-08 240 By MS/MS 9 0 1 1 1028600 1028600 0 14643 2763 15538 37182 26280 26280 1 590310 0 VCCEGMLIQLR NQENEHIYNLWCSGRVCCEGMLIQLRFLKR CSGRVCCEGMLIQLRFLKRQDLLNVLARMM R V C L R F 0 1 0 0 2 1 1 1 0 1 2 0 1 0 0 0 0 0 0 1 0 0 11 0 1377.6567 Q96A33 Q96A33 213 223 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 0.0011519 131.62 By MS/MS 6 0 1 1 2074100 2074100 0 14644 2114 15539 37183 26281 26281 1 16174 0 VCDIAAELAR LMIIQMETQSSMRKKVCDIAAELARNLIDE SMRKKVCDIAAELARNLIDEDGNNQWPEGL K V C A R N 3 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1116.5597 O00410 O00410 109 118 IPO5 Importin-5 yes yes 2 0.00075859 134.05 By MS/MS 4 0.816 1 1 1 3 8780400 8780400 0 14645 91 15540 37184;37185;37186 26282 26282 1 246520 0 VCEATYDTTLVEK FIEELKKYGVTTIVRVCEATYDTTLVEKEG VRVCEATYDTTLVEKEGIHVLDWPFDDGAP R V C E K E 1 0 0 1 1 0 2 0 0 0 1 1 0 0 0 0 3 0 1 2 0 0 13 0 1527.7127 Q93096 Q93096 48 60 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes yes 2 1.5431E-34 252.14 By MS/MS 9 0 1 1 227750 227750 0 14646 2099 15541 37187 26283 26283 1 130710 0 VCEEIAIIPSK KYYTRLGNDFHTNKRVCEEIAIIPSKKLRN TNKRVCEEIAIIPSKKLRNKIAGYVTHLMK R V C S K K 1 0 0 0 1 0 2 0 0 3 0 1 0 0 1 1 0 0 0 1 0 0 11 0 1257.6639 P08708 P08708 34 44 RPS17 40S ribosomal protein S17 yes yes 2 7.0158E-05 166.34 By MS/MS By matching 9.67 0.471 1 2 2 1 4426700 4404400 22356 14647 507 15542 37188;37189;37190 26284;26285 26285 2 4212500 573420 VCEEIAIIPSKK KYYTRLGNDFHTNKRVCEEIAIIPSKKLRN NKRVCEEIAIIPSKKLRNKIAGYVTHLMKR R V C K K L 1 0 0 0 1 0 2 0 0 3 0 2 0 0 1 1 0 0 0 1 0 0 12 1 1385.7588 P08708 P08708 34 45 RPS17 40S ribosomal protein S17 yes yes 2;3 0.00078383 152.54 By MS/MS 9.5 0.5 2 2 4 5351500 5351500 0 14648 507 15543 37191;37192;37193;37194 26286;26287;26288;26289 26289 4 5081000 0 VCENIPIVLCGNK VTYKNVPNWHRDLVRVCENIPIVLCGNKVD VRVCENIPIVLCGNKVDIKDRKVKAKSIVF R V C N K V 0 0 2 0 2 0 1 1 0 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1514.7585 P62826 P62826 111 123 RAN GTP-binding nuclear protein Ran yes yes 2 1.9792E-05 190.26 By MS/MS 8.5 0.5 1 1 2 2264100 2264100 0 14649 1146 15544 37195;37196 26290 26290 1 1216600 0 VCEPCYEQLNR KYSTIPKFGIEKEVRVCEPCYEQLNRKAEG KEVRVCEPCYEQLNRKAEGKATSTTELPPE R V C N R K 0 1 1 0 2 1 2 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 11 0 1466.6282 O14964 O14964 211 221 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 2 0.00051846 142 By MS/MS 4 0 1 1 825760 825760 0 14650 137 15545 37197 26291 26291 1 22542 0 VCFLATGAGR EESLRHVDASFFLGKVCFLATGAGRESHCS FFLGKVCFLATGAGRESHCSIHRHTVVKLA K V C G R E 2 1 0 0 1 0 0 2 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1050.528 Q9NSP4 Q9NSP4 97 106 CENPM Centromere protein M yes yes 2 0.0292 98.033 By MS/MS 9.5 0.5 1 1 2 568800 568800 0 14651 2627 15546 37198;37199 26292 26292 1 556460 0 VCGDSDKGFVVINQK FIEDRVKKIIELKRKVCGDSDKGFVVINQK VCGDSDKGFVVINQKGIDPFSLDALSKEGI K V C Q K G 0 0 1 2 1 1 0 2 0 1 0 2 0 1 0 1 0 0 0 3 0 0 15 1 1664.8192 P40227 P40227 281 295 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 4.6248E-49 281.17 By MS/MS 6 2 1 1 3 2 2 9 218460000 218460000 0 14652 828 15547 37200;37201;37202;37203;37204;37205;37206;37207;37208 26293;26294;26295;26296;26297;26298;26299 26295 6 1906000 0 VCHANPSER FGDILQLVIVELIYKVCHANPSERARFIRC VELIYKVCHANPSERARFIRCIYNLLQSSS K V C E R A 1 1 1 0 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 1068.4771 P53618 P53618 234 242 COPB1 Coatomer subunit beta yes yes 2;3 0.010278 104.2 By MS/MS 4.38 0.992 2 2 3 1 8 5398300 5398300 0 14653 1004 15548 37209;37210;37211;37212;37213;37214;37215;37216 26300;26301;26302 26300 3 155130 0 VCHLGDQLEGVNTPR HFQELDEHISYVATKVCHLGDQLEGVNTPR VCHLGDQLEGVNTPRQRAVEAQKLMKYFNE K V C P R Q 0 1 1 1 1 1 1 2 1 0 2 0 0 0 1 0 1 0 0 2 0 0 15 0 1693.8206 O00471 O00471 110 124 EXOC5 Exocyst complex component 5 yes yes 3 5.4651E-05 136.14 By MS/MS 5 0 1 1 2198400 2198400 0 14654 98 15549 37217 26303 26303 1 90362 0 VCISILHAPGDDPMGYESSAER FTCEMFHPNIYPDGRVCISILHAPGDDPMG APGDDPMGYESSAERWSPVQSVEKILLSVV R V C E R W 2 1 0 2 1 0 2 2 1 2 1 0 1 0 2 3 0 0 1 1 0 0 22 0 2403.0835 P60604 P60604 88 109 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 yes yes 3 7.6668E-06 116.98 By MS/MS 10 0 1 1 493430 493430 0 14655 1070 15550 37218 26304 26304 833 1 524460 0 VCLAEVYQDK ARYIVKNPQAYLNYKVCLAEVYQDKALVGD YLNYKVCLAEVYQDKALVGDFMNRRGDYDD K V C D K A 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 2 0 0 10 0 1223.5856 Q12789 Q12789 1335 1344 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0062841 103.26 By MS/MS 2.5 0.5 1 1 2 1385900 1385900 0 14656 1306 15551 37219;37220 26305;26306 26306 2 59920 0 VCLDIIYK DFVQVMRHRDDERQKVCLDIIYKMMPKLKP RDDERQKVCLDIIYKMMPKLKPVELRELLN K V C Y K M 0 0 0 1 1 0 0 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 8 0 1022.5471 P78527 P78527 2434 2441 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0084907 124.08 By MS/MS 2 0.816 1 1 1 3 1264600 1264600 0 14657 1197 15552 37221;37222;37223 26307 26307 1 59187 0 VCLESAVELPK IEIPIHIVPHVTIGKVCLESAVELPKILCQ TIGKVCLESAVELPKILCQEEQDAYRRIHS K V C P K I 1 0 0 0 1 0 2 0 0 0 2 1 0 0 1 1 0 0 0 2 0 0 11 0 1243.6482 P46736 P46736 227 237 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 2 0.00015368 156.83 By MS/MS 8 0 1 1 813130 813130 0 14658 883 15553 37224 26308 26308 1 53642 0 VCLGEVLQK KALKRVKSLKKQLTRVCLGEVLQKIDVQES KKQLTRVCLGEVLQKIDVQESFCMEEKQNK R V C Q K I 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 1044.5638 O95602 O95602 1288 1296 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 2 0.040478 85.161 By MS/MS 2.5 0.5 1 1 2 534220 534220 0 14659 401 15554 37225;37226 26309 26309 1 20039 0 VCLVHPDVK ELLRGEPLLPAGTQRVCLVHPDVKWGPGKS PAGTQRVCLVHPDVKWGPGKSQMTRAEWQV R V C V K W 0 0 0 1 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 3 0 0 9 0 1065.5641 O43824 O43824 98 106 GTPBP6 Putative GTP-binding protein 6 yes yes 3 0.011744 95.815 By MS/MS 6 0 1 1 2650800 2650800 0 14660 228 15555 37227 26310 26310 1 20671 0 VCMDFNIIR GVVHQAPYFGAEDYRVCMDFNIIRKDSLPV GAEDYRVCMDFNIIRKDSLPVCPVDASGCF R V C I R K 0 1 1 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 9 0 1166.5576 P41252 P41252 335 343 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00074465 140.14 By MS/MS 3 0 1 1 1293700 1293700 0 14661 840 15556 37228 26311 26311 597 1 33771 0 VCNPIITK AEKEEFEHQQKELEKVCNPIITKLYQSAGG QQKELEKVCNPIITKLYQSAGGMPGGMPGG K V C T K L 0 0 1 0 1 0 0 0 0 2 0 1 0 0 1 0 1 0 0 1 0 0 8 0 943.51609 P11142 P11142 602 609 HSPA8 Heat shock cognate 71 kDa protein yes yes 2 0.031446 98.629 By MS/MS By matching 5 0 2 1 1 19179000 19090000 89622 14662 546 15557 37229;37230 26312 26312 1 784660 265190 VCNYVNWIQQTIAAN GYGCAQKNKPGVYTKVCNYVNWIQQTIAAN VCNYVNWIQQTIAAN_______________ K V C A N - 2 0 3 0 1 2 0 0 0 2 0 0 0 0 0 0 1 1 1 2 0 0 15 0 1792.8567 CON__P00761 CON__P00761 217 231 yes yes 2 2.5028E-39 269.81 By MS/MS By MS/MS 5.67 2.87 1 1 1 2 1 1125900 1125900 0 + 14663 33 15558 37231;37232;37233 26313;26314;26315 26315 3 10947 0 VCQGIGMVNR APTQWLDGKHTIFGRVCQGIGMVNRVGMVE TIFGRVCQGIGMVNRVGMVETNSQDRPVDD R V C N R V 0 1 1 0 1 1 0 2 0 1 0 0 1 0 0 0 0 0 0 2 0 0 10 0 1132.5481 Q9Y3C6 Q9Y3C6 132 141 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 2 0.00066766 123.98 By MS/MS 10 0 1 1 153330 153330 0 14664 2928 15559 37234 26316 26316 1684 1 162980 0 VCQSLINVEGK LTSPDSGSAPMITCRVCQSLINVEGKMHQH ITCRVCQSLINVEGKMHQHVVKCGVCNEAT R V C G K M 0 0 1 0 1 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1245.6387 Q86T03 Q86T03 86 96 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 2 9.7218E-07 178.46 By MS/MS 8 0 1 1 2026500 2026500 0 14665 1814 15560 37235 26317 26317 1 133690 0 VCTLAIIDPGDSDIIR GNNIELGTACGKYYRVCTLAIIDPGDSDII CTLAIIDPGDSDIIRSMPEQTGEK______ R V C I R S 1 1 0 3 1 0 0 1 0 4 1 0 0 0 1 1 1 0 0 1 0 0 16 0 1756.9029 P62888 P62888 91 106 RPL30 60S ribosomal protein L30 yes yes 2 0.0029238 147.26 By MS/MS 10 0 1 1 2013900 2013900 0 14666 1157 15561 37236 26318;26319 26319 2 2140500 0 VCVVSVEKPTLPSK QCLFEKQLHMELASRVCVVSVEKPTLPSKE RVCVVSVEKPTLPSKEVKHARKTLKTLRDQ R V C S K E 0 0 0 0 1 0 1 0 0 0 1 2 0 0 2 2 1 0 0 4 0 0 14 1 1541.8487 O00411 O00411 412 425 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.045533 68.033 By MS/MS 3 0 1 1 5507200 5507200 0 14667 92 15562 37237 26320 26320 1 143770 0 VDALLSAQPK QLRVEEDVASDLVMKVDALLSAQPKGDPRI DLVMKVDALLSAQPKGDPRIEYQFFEDRHS K V D P K G 2 0 0 1 0 1 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 10 0 1040.5866 Q9NYU2 Q9NYU2 950 959 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 0.00081328 131.52 By MS/MS 3 0 1 1 438610 438610 0 14668 2699 15563 37238 26321 26321 1 11450 0 VDALMDEINFMK DVDAAYMNKVELEAKVDALMDEINFMKMFF EAKVDALMDEINFMKMFFDAELSQMQTHVS K V D M K M 1 0 1 2 0 0 1 0 0 1 1 1 2 1 0 0 0 0 0 1 0 0 12 0 1424.668 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 293 304 KRT5 Keratin, type II cytoskeletal 5 no no 2 0.0005263 120.09 By matching By MS/MS 3 1.87 1 1 1 1 1 3 225780 90333 135450 + 14669 50;61 15564 37239;37240;37241;37242 26322;26323;26324;26325;26326 26325 36;37 5 2358.2 241350 VDALNDEIR GTDLLSQLSLEDQKRVDALNDEIRQLQQEN LEDQKRVDALNDEIRQLQQENRQLLNERIK R V D I R Q 1 1 1 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1043.5247 Q9UQE7 Q9UQE7 797 805 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0011348 155.42 By MS/MS 3 0 1 1 1464300 1464300 0 14670 2860 15565 37243 26327 26327 0 38227 0 VDANEEVEALIVK VYSSKDPAQPKESSKVDANEEVEALIVKSP SKVDANEEVEALIVKSPQKEWNPSLFKVLY K V D V K S 2 0 1 1 0 0 3 0 0 1 1 1 0 0 0 0 0 0 0 3 0 0 13 0 1427.7508 P33527 P33527 291 303 ABCC1 Multidrug resistance-associated protein 1 yes yes 2 0.00070727 134.98 By MS/MS 2.5 0.5 1 1 2 206710 206710 0 14671 769 15566 37244;37245 26328 26328 1 7123 0 VDANISVHHPGEPLGVR ALGTSQANMAEGQLRVDANISVHHPGEPLG ANISVHHPGEPLGVRTEVKNLNSIRFLAKA R V D V R T 1 1 1 1 0 0 1 2 2 1 1 0 0 0 2 1 0 0 0 3 0 0 17 0 1795.9329 O75879 O75879 260 276 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes yes 3 0.0054436 91.789 By MS/MS 6 0 1 1 5025300 5025300 0 14672 333 15567 37246 26329 26329 1 39188 0 VDATADYICK VVTKDGVYVLDLAAKVDATADYICKVKWGD DLAAKVDATADYICKVKWGDIEFPPPFGRE K V D C K V 2 0 0 2 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1154.5278 P53396 P53396 221 230 ACLY ATP-citrate synthase yes yes 2 7.8933E-07 185.58 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 23717000 23717000 0 14673 1001 15568 37247;37248;37249;37250;37251;37252 26330;26331;26332;26333 26332 4 608500 0 VDATEESDLAQQYGVR AGKLKAEGSEIRLAKVDATEESDLAQQYGV DATEESDLAQQYGVRGYPTIKFFRNGDTAS K V D V R G 2 1 0 2 0 2 2 1 0 0 1 0 0 0 0 1 1 0 1 2 0 0 16 0 1779.8275 P07237 P07237 82 97 P4HB Protein disulfide-isomerase yes yes 2 1.3321E-92 339.5 By MS/MS By MS/MS 6 0 2 1 1 4879800 4825600 54184 14674 487 15569 37253;37254 26334;26335;26336 26336 3 37631 166180 VDAVHADVYR AAGTLDASTKIYAVRVDAVHADVYRVLGGL IYAVRVDAVHADVYRVLGGLGKDAPSLEEV R V D Y R V 2 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 3 0 0 10 0 1143.5673 Q15003 Q15003 169 178 NCAPH Condensin complex subunit 2 yes yes 2 0.045647 79.986 By MS/MS 4 0 1 1 377210 377210 0 14675 1457 15570 37255 26337 26337 1 10298 0 VDCDQHSDIAQR IKEEFPNENQVVFARVDCDQHSDIAQRYRI FARVDCDQHSDIAQRYRISKYPTLKLFRNG R V D Q R Y 1 1 0 3 1 2 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 12 0 1442.6208 Q9BS26 Q9BS26 90 101 ERP44 Endoplasmic reticulum resident protein 44 yes yes 2;3 1.4386E-07 191.33 By MS/MS 7 0 2 2 1348000 1348000 0 14676 2334 15571 37256;37257 26338;26339 26339 2 24090 0 VDCLNINCNPVK KIKGKEVERLPSAVKVDCLNINCNPVKTVI AVKVDCLNINCNPVKTVIDDLIQKLFDLLV K V D V K T 0 0 3 1 2 0 0 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 12 0 1444.6803 Q8NCM8 Q8NCM8 905 916 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.0021965 120.06 By MS/MS 1 0 1 1 226450 226450 0 14677 1954 15572 37258 26340 26340 1 11064 0 VDCTANTNTCNK EAAATRLKGIVPLAKVDCTANTNTCNKYGV LAKVDCTANTNTCNKYGVSGYPTLKIFRDG K V D N K Y 1 0 3 1 2 0 0 0 0 0 0 1 0 0 0 0 3 0 0 1 0 0 12 0 1396.5711 P30101 P30101 83 94 PDIA3 Protein disulfide-isomerase A3 yes yes 2 2.4031E-33 266.26 By MS/MS 6.5 0.5 1 1 2 2434300 2434300 0 14678 736 15573 37259;37260 26341 26341 1 19318 0 VDDESMQR QNEVTKERTAQCFLRVDDESMQRFHNRVRQ TAQCFLRVDDESMQRFHNRVRQILMASGST R V D Q R F 0 1 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 8 0 978.40766 Q6P2Q9 Q6P2Q9 1232 1239 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0006962 178.3 By MS/MS 1.5 0.5 2 2 4 485640 485640 0 14679 1706 15574;15575 37261;37262;37263;37264 26342;26343 26343 1226 2 24090 0 VDDFLANEAK DHGFVVCAFNRTVSKVDDFLANEAKGTKVV RTVSKVDDFLANEAKGTKVVGAQSLKEMVS K V D A K G 2 0 1 2 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1120.5401 P52209 P52209 39 48 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 2 0.00055471 142.83 By MS/MS 6.5 0.5 1 1 2 11634000 11634000 0 14680 981 15576 37265;37266 26344 26344 1 141240 0 VDDHDSEEICLDHLCK VNDSLSDVTSTTSSRVDDHDSEEICLDHLC DDHDSEEICLDHLCKGCPLNGSCSKVHFHL R V D C K G 0 0 0 4 2 0 2 0 2 1 2 1 0 0 0 1 0 0 0 1 0 0 16 0 1983.8302 Q7Z2W4 Q7Z2W4 504 519 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3;4 0.0011344 115.09 By MS/MS 4.8 0.748 2 2 1 5 3219800 3219800 0 14681 1777 15577 37267;37268;37269;37270;37271 26345;26346 26345 2 89479 0 VDDLLIIEEK YVQRLAETVFNFQEKVDDLLIIEEKIDLEV NFQEKVDDLLIIEEKIDLEVRSLETCMYDH K V D E K I 0 0 0 2 0 0 2 0 0 2 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1185.6493 Q14204 Q14204 847 856 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00042488 166.19 By MS/MS 2.5 1.12 1 1 1 1 4 1029400 1029400 0 14682 1421 15578 37272;37273;37274;37275 26347;26348 26347 2 45563 0 VDDSSEDKTEFTVK AEQGGQIYDEGYLVKVDDSSEDKTEFTVKN KVDDSSEDKTEFTVKNAQVRGGYVLHIGTI K V D V K N 0 0 0 3 0 0 2 0 0 0 0 2 0 1 0 2 2 0 0 2 0 0 14 1 1598.7312 P49588 P49588 551 564 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2;3 6.0765E-08 204.32 By MS/MS 4.33 0.471 2 1 3 4629200 4629200 0 14683 921 15579 37276;37277;37278 26349;26350 26350 2 141080 0 VDEAVAVLQAHQAK ELLHMLESPESLRSKVDEAVAVLQAHQAKE KVDEAVAVLQAHQAKEAAQKAVNSATGVPT K V D A K E 4 0 0 1 0 2 1 0 1 0 1 1 0 0 0 0 0 0 0 3 0 0 14 0 1477.7889 P11940;Q9H361 P11940 607 620 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 2 3.0458E-09 172.61 By MS/MS 5 0 1 1 0 0 0 14684 560 15580 37279 26351 26351 1 0 0 VDEEFQSPFASQSR QLVPHLHERRMKRFRVDEEFQSPFASQSRG RVDEEFQSPFASQSRGYFLFRPRNGRRSAG R V D S R G 1 1 0 1 0 2 2 0 0 0 0 0 0 2 1 3 0 0 0 1 0 0 14 0 1625.7322 P48645 P48645 144 157 NMU Neuromedin-U;Neuromedin-U-25 yes yes 2 0.00012978 144.28 By MS/MS 10 0 1 1 152710 152710 0 14685 910 15581 37280 26352 26352 1 162320 0 VDEIVLK PEDQLPCYLTHTNPRVDEIVLKNLHLNSHV YLTHTNPRVDEIVLKNLHLNSHVKETTRGP R V D L K N 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 7 0 814.48002 Q9Y2Z2 Q9Y2Z2 291 297 MTO1 Protein MTO1 homolog, mitochondrial yes yes 2 0.017924 132.09 By MS/MS 4.5 0.5 1 1 2 1071600 1071600 0 14686 2908 15582 37281;37282 26353 26353 1 43147 0 VDELEAALR AEQRGELALKDAQAKVDELEAALRMAKQNL KDAQAKVDELEAALRMAKQNLARLLCEYQE K V D L R M 2 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1014.5346 CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4 CON__Q8N1N4-2 376 384 KRT78 Keratin, type II cytoskeletal 78 yes no 2 0.0089015 121.09 By MS/MS 2 0 1 1 32724 0 32724 + 14687 62 15583 37283 26354 26354 1 0 27551 VDELTTDLEILK RAESLQQEVEALKERVDELTTDLEILKAEI KERVDELTTDLEILKAEIEEKGSDGAASSY R V D L K A 0 0 0 2 0 0 2 0 0 1 3 1 0 0 0 0 2 0 0 1 0 0 12 0 1387.7446 Q14203 Q14203 332 343 DCTN1 Dynactin subunit 1 yes yes 2 1.232E-11 211.86 By MS/MS 3.5 0.5 1 1 2 540950 540950 0 14688 1420 15584 37284;37285 26355 26355 1 14198 0 VDENFDCVEADDVEGK AGSLSTMFRVEYASKVDENFDCVEADDVEG DENFDCVEADDVEGKIRQIIPPGFCTNTND K V D G K I 1 0 1 4 1 0 3 1 0 0 0 1 0 1 0 0 0 0 0 3 0 0 16 0 1839.7469 O14929 O14929 95 110 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 1.3023E-38 259.27 By MS/MS 7 0 1 1 2902900 2902900 0 14689 134 15585 37286 26356 26356 1 51875 0 VDENGPELLPR VQAQLRASPNTPPGRVDENGPELLPRVAML PPGRVDENGPELLPRVAMLRLLTWVIGTGS R V D P R V 0 1 1 1 0 0 2 1 0 0 2 0 0 0 2 0 0 0 0 1 0 0 11 0 1237.6303 Q92616 Q92616 1027 1037 GCN1L1 Translational activator GCN1 yes yes 2 0.0027866 117.02 By MS/MS 2 0.816 1 1 1 3 3852200 3852200 0 14690 2068 15586 37287;37288;37289 26357;26358;26359;26360 26358 4 168520 0 VDFPQDQLTALTGR AGKTIIPLISQCTPKVDFPQDQLTALTGRI KVDFPQDQLTALTGRIQEAGTEVVKAKAGA K V D G R I 1 1 0 2 0 2 0 1 0 0 2 0 0 1 1 0 2 0 0 1 0 0 14 0 1559.7944 P40926 P40926 216 229 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 1.1679E-12 211.22 By MS/MS 8 0 1 1 952690 952690 0 14691 832 15587 37290 26361;26362;26363 26362 3 62848 0 VDFSKVPK GQPDVVVKEDEEYKRVDFSKVPKLKTVFQK EDEEYKRVDFSKVPKLKTVFQKENGTVTAA R V D P K L 0 0 0 1 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 2 0 0 8 1 918.51747 P24752 P24752 259 266 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 2;3 0.0093768 147.29 By MS/MS By matching 7.25 0.433 3 1 3 1 21208000 21149000 58828 14692 680 15588 37291;37292;37293;37294 26364;26365 26365 2 401570 241500 VDFTFYPR SDLYMASLSCLLNYRVDFTFYPRRTPLQHE SCLLNYRVDFTFYPRRTPLQHEAPLWMDQL R V D P R R 0 1 0 1 0 0 0 0 0 0 0 0 0 2 1 0 1 0 1 1 0 0 8 0 1043.5076 Q9H857 Q9H857 481 488 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.00077635 176.41 By MS/MS 6 0 1 1 6671400 6671400 0 14693 2522 15589 37295 26366 26366 1 52024 0 VDGAYVAVK FVEDVKNVPVGKVLKVDGAYVAVKFPGTSS VGKVLKVDGAYVAVKFPGTSSNTNCQNSSG K V D V K F 2 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 9 0 920.49673 O95071 O95071 673 681 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.037588 86.794 By MS/MS 2 0.816 1 1 1 3 349140 349140 0 14694 364 15590 37296;37297;37298 26367 26367 1 14425 0 VDGMDILCVR STDYYKRGDFIPGLRVDGMDILCVREATRF IPGLRVDGMDILCVREATRFAAAYCRSGKG R V D V R E 0 1 0 2 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 2 0 0 10 0 1176.5631 P08559 P08559 254 263 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 1.968E-07 193.1 By MS/MS 7.5 0.5 1 1 2 1637500 1637500 0 14695 504 15591 37299;37300 26368 26368 1 34397 0 VDIAPHVR KLEKLMPEIVATASKVDIAPHVRDGYIMMF IVATASKVDIAPHVRDGYIMMFNYLPITFG K V D V R D 1 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 2 0 0 8 0 905.5083 Q92616 Q92616 1746 1753 GCN1L1 Translational activator GCN1 yes yes 2 0.024314 98.997 By MS/MS 2.5 0.5 1 1 2 1174800 1174800 0 14696 2068 15592 37301;37302 26369 26369 1 42946 0 VDIGDTIIYLVH DLMSKKIHLTENGIRVDIGDTIIYLVH___ GIRVDIGDTIIYLVH_______________ R V D V H - 0 0 0 2 0 0 0 1 1 3 1 0 0 0 0 0 1 0 1 2 0 0 12 0 1356.7289 Q9P2J5 Q9P2J5 1165 1176 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 1.5029E-05 201.07 By MS/MS 3.5 0.5 1 1 2 1596100 1596100 0 14697 2738 15593 37303;37304 26370;26371 26371 2 41799 0 VDILDPALLR FQPNTQVKVIAATNRVDILDPALLRSGRLD AATNRVDILDPALLRSGRLDRKIEFPMPNE R V D L R S 1 1 0 2 0 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 10 0 1123.6601 P17980 P17980 335 344 PSMC3 26S protease regulatory subunit 6A yes yes 2 0.0050913 107.15 By MS/MS 8 1.41 1 1 1 1 1 5 4199100 4199100 0 14698 618 15594 37305;37306;37307;37308;37309 26372 26372 1 97060 0 VDLETVPK SMDASPELSIEALPKVDLETVPKVSIVASP SIEALPKVDLETVPKVSIVASPEASLEAPP K V D P K V 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 1 0 0 2 0 0 8 0 899.4964 Q8IWC1 Q8IWC1 372 379 MAP7D3 MAP7 domain-containing protein 3 yes yes 2 0.0019191 161.9 By MS/MS 3 0 1 1 1433200 1433200 0 14699 1864 15595 37310 26373 26373 1 37413 0 VDLGTLR DQETRNVKAQSQTDRVDLGTLRGYYNQSEA KAQSQTDRVDLGTLRGYYNQSEAGSHTIQI R V D L R G 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 7 0 772.4443 P04439 P04439 100 106 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain yes yes 2 0.019236 128.48 By MS/MS 7 0 1 1 4045200 4045200 0 14700 453 15596 37311 26374 26374 1 72289 0 VDLLNQEIEFLK DVDNAYMIKVELQSKVDLLNQEIEFLKVLY QSKVDLLNQEIEFLKVLYDAEISQIHQSVT K V D L K V 0 0 1 1 0 1 2 0 0 1 3 1 0 1 0 0 0 0 0 1 0 0 12 0 1459.7922 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 303 314 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 3.3949E-36 282.61 By MS/MS By MS/MS 5.33 3.23 2 1 1 1 1 2 1 6 3 2648200 2277400 370800 + 14701 52 15597 37312;37313;37314;37315;37316;37317;37318;37319;37320 26375;26376;26377;26378;26379;26380;26381;26382;26383;26384 26381 10 459460 3101200 VDLNEEETILIIR FEQWFNAPFAMTGEKVDLNEEETILIIRRL EKVDLNEEETILIIRRLHKVLRPFLLRRLK K V D I R R 0 1 1 1 0 0 3 0 0 3 2 0 0 0 0 0 1 0 0 1 0 0 13 0 1555.8457 P51532;P51531 P51532 954 966 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 yes no 2 1.7503E-07 180.66 By MS/MS 2 0 1 1 122070 122070 0 14702 965 15598 37321 26385 26385 1 6067.4 0 VDLPLIDSLIR IYASQTEQEYLKIEKVDLPLIDSLIRVLQN KIEKVDLPLIDSLIRVLQNMEQCQKKPENS K V D I R V 0 1 0 2 0 0 0 0 0 2 3 0 0 0 1 1 0 0 0 1 0 0 11 0 1252.7391 Q96ER3 Q96ER3 348 358 SAAL1 Protein SAAL1 yes yes 2 0.0014397 127.76 By MS/MS 6 0 1 1 505240 505240 0 14703 2165 15599 37322 26386 26386 1 3939.8 0 VDMLSEINIAPR PRNMRLPDPFTPNLKVDMLSEINIAPRILT NLKVDMLSEINIAPRILTNFTGVMPPQFKK K V D P R I 1 1 1 1 0 0 1 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 12 0 1356.7071 A5YKK6 A5YKK6 2152 2163 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.034095 86.189 By MS/MS 2 0 1 1 122710 122710 0 14704 19 15600 37323 26387 26387 5 0 6099.2 0 VDNDENEHQLSLR LFGCELKADKDYHFKVDNDENEHQLSLRTV FKVDNDENEHQLSLRTVSLGAGAKDELHIV K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748 P06748 33 45 NPM1 Nucleophosmin yes yes 2 8.9582E-12 212.9 By MS/MS 4.5 2.5 1 1 2 3717700 3717700 0 14705 485 15601 37324;37325 26388;26389 26389 2 74328 0 VDNEFDQR SALKTLMAQSIYGGRVDNEFDQRLLNTFLE QSIYGGRVDNEFDQRLLNTFLERLFTTRSF R V D Q R L 0 1 1 2 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 8 0 1021.4465 Q14204 Q14204 4256 4263 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00099271 172.94 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 2276800 2250200 26603 14706 1421 15602 37326;37327;37328;37329;37330 26390;26391 26391 2 100480 26603 VDNSSLTGESEPQTR RIPADLRIISANGCKVDNSSLTGESEPQTR VDNSSLTGESEPQTRSPDFTNENPLETRNI K V D T R S 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 3 2 0 0 1 0 0 15 0 1618.7435 P05023;P50993;P20648;P13637 P05023 213 227 ATP1A1;ATP1A2;ATP4A;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-3 no no 2 1.1264E-49 274.39 By MS/MS By MS/MS 4 1.87 1 1 1 2 1 1 1 7 1 22389000 22321000 67939 14707 463;575 15603 37331;37332;37333;37334;37335;37336;37337;37338 26392;26393;26394;26395;26396;26397 26396 6 764600 141960 VDPSLMEDSDDGPSLPTK GIYHLNLFIAFLSPKVDPSLMEDSDDGPSL SLMEDSDDGPSLPTKQNEEFRPFIRRLPEF K V D T K Q 0 0 0 4 0 0 1 1 0 0 2 1 1 0 3 3 1 0 0 1 0 0 18 0 1901.8564 O15258 O15258 87 104 RER1 Protein RER1 yes yes 2 0.016671 96.059 By MS/MS 1.5 0.5 1 1 2 305120 305120 0 14708 163 15604 37339;37340 26398 26398 1 15003 0 VDPSQPIDLTQLVNGR PLSLNRLQYLIDLGRVDPSQPIDLTQLVNG DPSQPIDLTQLVNGRGVTIQPLKRDYGVQL R V D G R G 0 1 1 2 0 2 0 1 0 1 2 0 0 0 2 1 1 0 0 2 0 0 16 0 1750.9214 Q9P015 Q9P015 110 125 MRPL15 39S ribosomal protein L15, mitochondrial yes yes 2 4.4632E-21 248.67 By MS/MS 8.5 0.5 1 1 2 1978300 1978300 0 14709 2721 15605 37341;37342 26399 26399 1 147780 0 VDQEIINIMQDR MCMYEAEMQWKRDYKVDQEIINIMQDRLKA DYKVDQEIINIMQDRLKACQQREGQNYQQN K V D D R L 0 1 1 2 0 2 1 0 0 3 0 0 1 0 0 0 0 0 0 1 0 0 12 0 1472.7293 O96000 O96000 92 103 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 3.7451E-07 179.35 By MS/MS 9 0 2 2 1217900 1217900 0 14710 417 15606;15607 37343;37344 26400;26401 26400 220 2 698950 0 VDQIIMAK WAIKLATNAAVTVLRVDQIIMAKPAGGPKP AAVTVLRVDQIIMAKPAGGPKPPSGKKDWD R V D A K P 1 0 0 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 8 0 916.50519 P50990 P50990 521 528 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0039028 134.48 By MS/MS 7 1.22 1 2 2 2 1 8 46287000 46287000 0 14711 955 15608;15609 37345;37346;37347;37348;37349;37350;37351;37352 26402;26403;26404 26402 710 3 453620 0 VDQLKSDQSR LEPYFESFINNLRRRVDQLKSDQSRLDSEL NLRRRVDQLKSDQSRLDSELKNMQDMVEDY R V D S R L 0 1 0 2 0 2 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 10 1 1174.5942 P04264;CON__P04264 P04264 242 251 KRT1 Keratin, type II cytoskeletal 1 no no 2 0.020979 114.51 By matching By MS/MS 6.5 1.71 1 1 1 1 1 1 1 5 710910 156550 554360 + 14712 450;45 15610 37353;37354;37355;37356;37357;37358 26405;26406 26406 2 89845 1778800 VDQSAVGFEYQGK SVRGFGGKFGVQMDRVDQSAVGFEYQGKTE DRVDQSAVGFEYQGKTEKHASQKDYSSGFG R V D G K T 1 0 0 1 0 2 1 2 0 0 0 1 0 1 0 1 0 0 1 2 0 0 13 0 1426.6729 Q14247 Q14247 132 144 CTTN Src substrate cortactin yes yes 2 0.00031843 142.1 By MS/MS 5 0 1 1 1236200 1236200 0 14713 1424 15611 37359 26407 26407 1 50813 0 VDQSILTGESVSVIK PADIRLTSIKSTTLRVDQSILTGESVSVIK VDQSILTGESVSVIKHTDPVPDPRAVNQDK R V D I K H 0 0 0 1 0 1 1 1 0 2 1 1 0 0 0 3 1 0 0 3 0 0 15 0 1573.8563 P16615;O14983 P16615 175 189 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 1.0553E-49 275.35 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 18126000 18126000 0 14714 608 15612 37360;37361;37362;37363;37364;37365;37366;37367;37368 26408;26409;26410;26411;26412 26411 5 1276300 0 VDQVQDIVTGNPTVIK LKLFKTALEEEIKSKVDQVQDIVTGNPTVI DQVQDIVTGNPTVIKMVVSFNRGARGQNTL K V D I K M 0 0 1 2 0 2 0 1 0 2 0 1 0 0 1 0 2 0 0 4 0 0 16 0 1724.9309 Q13576 Q13576 951 966 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 3.3158E-29 246.86 By MS/MS 3.5 0.5 1 1 2 1824900 1824900 0 14715 1383 15613 37369;37370 26413 26413 1 47756 0 VDREQLVQK ______________________________ ______________________________ M V D Q K A 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 1 1113.6142 P61981 P61981 2 10 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.00668 126.07 By MS/MS By matching 8.75 0.829 2 1 1 3 1 22346000 22237000 108970 14716 1111 15614 37371;37372;37373;37374 26414 26414 1 1642600 929630 VDSEVLSAK TPRFAEFLLPLLIEKVDSEVLSAKLDSLQT PLLIEKVDSEVLSAKLDSLQTLNACCAVYG K V D A K L 1 0 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 2 0 0 9 0 946.49713 Q96T76 Q96T76 267 275 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 1.8728E-05 175.91 By MS/MS 4 0 1 1 433590 433590 0 14717 2261 15615 37375 26415 26415 1 11837 0 VDSLLENLEK DLQAIKKELTQIKQKVDSLLENLEKIEKEQ QIKQKVDSLLENLEKIEKEQSKQAVEMKND K V D E K I 0 0 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1158.6132 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 207 216 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 2.333E-07 192.64 By MS/MS 7 0 1 1 2129400 2129400 0 14718 495 15616 37376 26416 26416 1 38053 0 VDSTTCLFPVEEK GERGKDKKGSCNLSRVDSTTCLFPVEEKAV SRVDSTTCLFPVEEKAVEYYFASDASAVIE R V D E K A 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1523.7178 Q06210 Q06210 259 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.00024676 146.36 By MS/MS 5.5 0.5 1 1 2 3372400 3372400 0 14719 1274 15617 37377;37378 26417 26417 1 112370 0 VDTAVIK AVCKAAIIADSSTFRVDTAVIKQRVPILLK IADSSTFRVDTAVIKQRVPILLKYLDSDTE R V D I K Q 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 7 0 744.43815 O43432 O43432 1484 1490 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.036682 110.34 By MS/MS 2.5 0.5 1 1 2 551150 551150 0 14720 200 15618 37379;37380 26418 26418 1 22930 0 VDTQDQGMYR NLAAAQRDAVDFDVRVDTQDQGMYRFLTSQ DFDVRVDTQDQGMYRFLTSQQLFKLLDCLL R V D Y R F 0 1 0 2 0 2 0 1 0 0 0 0 1 0 0 0 1 0 1 1 0 0 10 0 1211.5241 Q9Y6D6 Q9Y6D6 1663 1672 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.00083186 130.66 By MS/MS 2 0 1 1 295280 295280 0 14721 3003 15619 37381 26419 26419 1 14677 0 VDVAVLK TAVCYSAIIFETPLRVDVAVLKARAKLLQK IIFETPLRVDVAVLKARAKLLQKYLCDEQK R V D L K A 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 7 0 742.45889 Q04637 Q04637 1499 1505 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.019274 128.38 By MS/MS 2 0 1 1 10278000 10278000 0 14722 1264 15620 37382 26420 26420 1 510850 0 VDVAVNCAGIAVASK DVQTALALAKGKFGRVDVAVNCAGIAVASK VDVAVNCAGIAVASKTYNLKKGQTHTLEDF R V D S K T 4 0 1 1 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 4 0 0 15 0 1472.7657 Q99714 Q99714 85 99 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 2 7.674E-63 291.75 By MS/MS 8.5 0.5 1 1 2 2754400 2754400 0 14723 2285 15621 37383;37384 26421;26422 26422 1 956480 0 VDVEALENSAGATYIR ALSKHLPSSDSMSLKVDVEALENSAGATYI DVEALENSAGATYIRKKGGKVTGDSQPKEQ K V D I R K 3 1 1 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 1 2 0 0 16 0 1706.8475 O76094 O76094 516 531 SRP72 Signal recognition particle subunit SRP72 yes yes 2 2.9769E-15 265.77 By MS/MS 6 0.816 1 1 1 3 2565900 2565900 0 14724 346 15622 37385;37386;37387 26423 26423 1 60247 0 VDVFTNLGYR APECKVLTAAGNSCRVDVFTNLGYRAFSLS GNSCRVDVFTNLGYRAFSLSF_________ R V D Y R A 0 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 1 2 0 0 10 0 1182.6033 Q86W42 Q86W42 326 335 THOC6 THO complex subunit 6 homolog yes yes 2 1.8449E-05 174.86 By MS/MS 8 0 1 1 779890 779890 0 14725 1834 15623 37388 26424 26424 1 51449 0 VDVGQQPLR VRGANTHLSTFSFTKVDVGQQPLRINGVKV TFSFTKVDVGQQPLRINGVKVYTENVDKRQ K V D L R I 0 1 0 1 0 2 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 9 0 1010.5509 A0FGR8 A0FGR8 240 248 ESYT2 Extended synaptotagmin-2 yes yes 2 0.00021894 171.53 By MS/MS 4.5 0.5 1 1 2 1680400 1680400 0 14726 6 15624 37389;37390 26425 26425 1 51848 0 VDVSLIER CLATTQQLEEKLKEKVDVSLIERINLTGEM EEKLKEKVDVSLIERINLTGEMDTFSTVIS K V D E R I 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 8 0 929.5182 Q5VIR6 Q5VIR6 577 584 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 2 0.0084904 124.08 By MS/MS 4 0 1 1 1279400 1279400 0 14727 1645 15625 37391 26426 26426 1 34927 0 VDVTEQPGLSGR SFAEWGEDLEVNIAKVDVTEQPGLSGRFII IAKVDVTEQPGLSGRFIITALPTIYHCKDG K V D G R F 0 1 0 1 0 1 1 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1256.6361 Q9H3N1 Q9H3N1 83 94 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.00018128 153.54 By MS/MS 7.5 1.12 1 1 1 1 4 8233500 8233500 0 14728 2489 15626 37392;37393;37394;37395 26427 26427 1 496940 0 VDWLTEK LTITQAVIFINTRRKVDWLTEKMHARDFTV IFINTRRKVDWLTEKMHARDFTVSAMHGDM K V D E K M 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 7 0 889.45453 P60842;Q14240;P38919 P60842 285 291 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 2 0.0073138 166.17 By MS/MS By matching 5.56 2.36 1 1 1 3 1 1 1 8 1 129930000 129900000 35160 14729 1074;821 15627 37396;37397;37398;37399;37400;37401;37402;37403;37404 26428;26429;26430;26431;26432;26433 26432 6 2174400 107830 VDYYEVLGVQR ______________________________ ______________________________ M V D Q R H 0 1 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 2 3 0 0 11 0 1339.6772 O75190 O75190 2 12 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 2 8.6297E-05 183.43 By MS/MS 7.5 0.5 2 2 4 5224400 5224400 0 14730 291 15628;15629 37405;37406;37407;37408 26434;26435;26436;26437;26438 26435 5 261850 0 VEAALDSR EEVKNFITRENLEARVEAALDSRKNYNWAI RENLEARVEAALDSRKNYNWAITREGLVVR R V E S R K 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 8 0 859.43995 Q9BYN8 Q9BYN8 177 184 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.017715 109.71 By MS/MS By matching 9 0 2 1 1 6048500 5997700 50766 14731 2417 15630 37409;37410 26439 26439 1 3442100 547120 VEAALDSRK EEVKNFITRENLEARVEAALDSRKNYNWAI ENLEARVEAALDSRKNYNWAITREGLVVRP R V E R K N 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 1 987.53491 Q9BYN8 Q9BYN8 177 185 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.040114 104.01 By MS/MS 9 0 1 1 483650 483650 0 14732 2417 15631 37411 26440 26440 1 277570 0 VEAAQETVADYQQTIK QLDMAGARVREAQKRVEAAQETVADYQQTI EAAQETVADYQQTIKKYRQLTAHLQDVNRE R V E I K K 3 0 0 1 0 3 2 0 0 1 0 1 0 0 0 0 2 0 1 2 0 0 16 0 1792.8843 Q14203 Q14203 503 518 DCTN1 Dynactin subunit 1 yes yes 2 1.8519E-92 336.93 By MS/MS 3 0 1 1 1154000 1154000 0 14733 1420 15632 37412 26441 26441 1 30124 0 VEAAQETVADYQQTIKK QLDMAGARVREAQKRVEAAQETVADYQQTI AAQETVADYQQTIKKYRQLTAHLQDVNREL R V E K K Y 3 0 0 1 0 3 2 0 0 1 0 2 0 0 0 0 2 0 1 2 0 0 17 1 1920.9793 Q14203 Q14203 503 519 DCTN1 Dynactin subunit 1 yes yes 2 2.2218E-25 259.27 By MS/MS 3 0 1 1 583810 583810 0 14734 1420 15633 37413 26442;26443 26442 2 15240 0 VEAEFELLTVEEAEK EFTDMGGNVYILTGKVEAEFELLTVEEAEK VEAEFELLTVEEAEKRPVGKGRKQPEPLEK K V E E K R 2 0 0 0 0 0 6 0 0 0 2 1 0 1 0 0 1 0 0 2 0 0 15 0 1734.8564 A9Z1Z3 A9Z1Z3 1702 1716 FER1L4 Fer-1-like protein 4 yes yes 2 0.011642 90.827 By MS/MS 9 0 1 1 765280 765280 0 14735 27 15634 37414 26444 26444 1 439200 0 VEAGDVIYIEANSGAVK LKLDPSIFESLQKERVEAGDVIYIEANSGA AGDVIYIEANSGAVKRQGRCDTYATEFDLE R V E V K R 3 0 1 1 0 0 2 2 0 2 0 1 0 0 0 1 0 0 1 3 0 0 17 0 1733.8836 Q9Y265 Q9Y265 185 201 RUVBL1 RuvB-like 1 yes yes 2 6.8412E-19 210.14 By MS/MS 6 0 1 1 6658100 6658100 0 14736 2870 15635 37415 26445 26445 1 51920 0 VEAGDVIYIEANSGAVKR LKLDPSIFESLQKERVEAGDVIYIEANSGA GDVIYIEANSGAVKRQGRCDTYATEFDLEA R V E K R Q 3 1 1 1 0 0 2 2 0 2 0 1 0 0 0 1 0 0 1 3 0 0 18 1 1889.9847 Q9Y265 Q9Y265 185 202 RUVBL1 RuvB-like 1 yes yes 2 7.614E-25 225.72 By MS/MS 6 0 1 1 15337000 15337000 0 14737 2870 15636 37416 26446 26446 1 119600 0 VEALPEQVAPESR YTMYSMMNVGQTAEKVEALPEQVAPESRNR EKVEALPEQVAPESRNRIRVRQDLASLPAE K V E S R N 2 1 0 0 0 1 3 0 0 0 1 0 0 0 2 1 0 0 0 2 0 0 13 0 1423.7307 Q96RE7 Q96RE7 319 331 NACC1 Nucleus accumbens-associated protein 1 yes yes 2 0.0092416 96.334 By MS/MS 5 0 1 1 1259000 1259000 0 14738 2244 15637 37417 26447 26447 1 51752 0 VEALQSGGGQER KGVGAIYIRRRPRVRVEALQSGGGQERGMR RVRVEALQSGGGQERGMRSGTVPTPLVVGL R V E E R G 1 1 0 0 0 2 2 3 0 0 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1229.6 Q9Y697 Q9Y697 278 289 NFS1 Cysteine desulfurase, mitochondrial yes yes 2 1.2354E-05 174.23 By MS/MS 7.5 0.5 1 1 2 4258300 4258300 0 14739 2998 15638 37418;37419 26448 26448 1 89101 0 VEAQHILASAPTDR RMAGAIAQGLIRAGKVEAQHILASAPTDRN KVEAQHILASAPTDRNLCHFQALGCRTTHS K V E D R N 3 1 0 1 0 1 1 0 1 1 1 0 0 0 1 1 1 0 0 1 0 0 14 0 1506.7791 Q53H96 Q53H96 33 46 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 2 5.5516E-05 153.75 By MS/MS 8 0 1 1 1461600 1461600 0 14740 1588 15639 37420 26449 26449 1 96424 0 VEAQLQELQVK VLLQGKGDSEHKRKKVEAQLQELQVKFNEG KRKKVEAQLQELQVKFNEGERVRTELADKV K V E V K F 1 0 0 0 0 3 2 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1283.7085 P35579 P35579 1250 1260 MYH9 Myosin-9 yes yes 2 5.4679E-07 185.96 By MS/MS 2 0 1 1 277240 277240 0 14741 793 15640 37421 26450 26450 1 13780 0 VEAQVYILSK GLVMVKPGSIKPHQKVEAQVYILSKEEGGR KPHQKVEAQVYILSKEEGGRHKPFVSHFMP K V E S K E 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 1 2 0 0 10 0 1148.6441 P49411 P49411 352 361 TUFM Elongation factor Tu, mitochondrial yes yes 2 1.2345E-06 194.12 By MS/MS By MS/MS 7.6 1.36 1 2 1 1 4 1 52168000 52002000 165720 14742 918 15641 37422;37423;37424;37425;37426 26451;26452;26453;26454 26452 4 1334300 680310 VEAQVYILSKEEGGR GLVMVKPGSIKPHQKVEAQVYILSKEEGGR VEAQVYILSKEEGGRHKPFVSHFMPVMFSL K V E G R H 1 1 0 0 0 1 3 2 0 1 1 1 0 0 0 1 0 0 1 2 0 0 15 1 1676.8733 P49411 P49411 352 366 TUFM Elongation factor Tu, mitochondrial yes yes 2 5.329E-07 174.46 By MS/MS 7 0 1 1 1637900 1637900 0 14743 918 15642 37427 26455 26455 1 29270 0 VEATVIEK FTLLGKPLLGKDLVRVEATVIEKTESWPRI LGKDLVRVEATVIEKTESWPRIIMRFRKRK R V E E K T 1 0 0 0 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 8 0 887.4964 Q7Z2W9 Q7Z2W9 156 163 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 0.013245 115.49 By MS/MS 9 0 1 1 3302600 3302600 0 14744 1778 15643 37428 26456 26456 1 1895400 0 VEAVNMAEGIIHDTETK NAEKYAEEDRRKKERVEAVNMAEGIIHDTE AVNMAEGIIHDTETKMEEFKDQLPADECNK R V E T K M 2 0 1 1 0 0 3 1 1 2 0 1 1 0 0 0 2 0 0 2 0 0 17 0 1855.8986 P38646 P38646 579 595 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.022074 71.143 By MS/MS 5.33 0.471 2 1 3 4255800 4255800 0 14745 820 15644;15645 37429;37430;37431 26457;26458 26457 567 2 143390 0 VECVGDDIAWMR KTNLAMMRPALPGWKVECVGDDIAWMRFDS GWKVECVGDDIAWMRFDSEGRLRAINPENG K V E M R F 1 1 0 2 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 2 0 0 12 0 1449.6381 Q16822 Q16822 323 334 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.0023429 119.34 By MS/MS 6 0.816 1 1 1 3 1244900 1244900 0 14746 1550 15646 37432;37433;37434 26459 26459 1 22826 0 VEDALNLKEEFDR GGYAALINLCCRHDKVEDALNLKEEFDRLD DKVEDALNLKEEFDRLDSSAVLDTGKYVGL K V E D R L 1 1 1 2 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 13 1 1576.7733 P42704 P42704 727 739 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.006923 132.14 By MS/MS 3 0 1 1 1208600 1208600 0 14747 854 15647 37435 26460 26460 1 31549 0 VEDAYILTCNVSLEYEK LVLDHGARHPDMKKRVEDAYILTCNVSLEY DAYILTCNVSLEYEKTEVNSGFFYKSAEER R V E E K T 1 0 1 1 1 0 3 0 0 1 2 1 0 0 0 1 1 0 2 2 0 0 17 0 2044.9663 P40227 P40227 225 241 CCT6A T-complex protein 1 subunit zeta yes yes 2 3.5484E-25 225.72 By MS/MS 6 0 1 1 1396500 1396500 0 14748 828 15648 37436 26461 26461 1 10890 0 VEDLSTCNDLIAK DKTELQNTLRTLSSKVEDLSTCNDLIAKHG SKVEDLSTCNDLIAKHGTALQRSLSELESL K V E A K H 1 0 1 2 1 0 1 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1476.713 P22059 P22059 218 230 OSBP Oxysterol-binding protein 1 yes yes 2 1.2375E-11 199.82 By MS/MS 4 0 1 1 1006900 1006900 0 14749 654 15649 37437 26462 26462 1 27488 0 VEDVPIPIYFPPESQR GAKFKINPKNGQRERVEDVPIPIYFPPESQ EDVPIPIYFPPESQRGLWGGEGWILGQIYA R V E Q R G 0 1 0 1 0 1 2 0 0 2 0 0 0 1 4 1 0 0 1 2 0 0 16 0 1884.9622 Q13084 Q13084 62 77 MRPL28 39S ribosomal protein L28, mitochondrial yes yes 2 0.010766 94.725 By MS/MS 8.33 0.471 2 1 3 1118000 1118000 0 14750 1331 15650 37438;37439;37440 26463;26464;26465;26466 26463 4 95112 0 VEEAEPEEFVVEK TLQKMGKKQNGKSKKVEEAEPEEFVVEKVL KKVEEAEPEEFVVEKVLDRRVVNGKVEYFL K V E E K V 1 0 0 0 0 0 6 0 0 0 0 1 0 1 1 0 0 0 0 3 0 0 13 0 1532.7246 Q13185 Q13185 22 34 CBX3 Chromobox protein homolog 3 yes yes 2 8.684E-12 204.17 By MS/MS 9.5 0.5 1 1 2 1605600 1605600 0 14751 1344 15651 37441;37442 26467 26467 1 962840 0 VEEEAAQK QLAKKEEELQAALARVEEEAAQKNMALKKI LQAALARVEEEAAQKNMALKKIRELESQIS R V E Q K N 2 0 0 0 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 8 0 902.43453 P35579 P35579 1092 1099 MYH9 Myosin-9 yes yes 2 0.0076389 131.03 By MS/MS 2 0 1 1 0 0 0 14752 793 15652 37443 26468 26468 1 0 0 VEEISPNIR ASAFTEEQAVLYNQRVEEISPNIRYCAYNI VLYNQRVEEISPNIRYCAYNIGDQSAINEL R V E I R Y 0 1 1 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 0 1 0 0 9 0 1055.5611 Q9UHB9 Q9UHB9 237 245 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.0071367 122.13 By MS/MS By matching 5 0 2 1 1 7925300 7901800 23513 14753 2779 15653 37444;37445 26469 26469 1 324800 69575 VEELCPFPLDSLQQEMSK RESLGAKKHDFAIIRVEELCPFPLDSLQQE LCPFPLDSLQQEMSKYKHVKDHIWSQEEPQ R V E S K Y 0 0 0 1 1 2 3 0 0 0 3 1 1 1 2 2 0 0 0 1 0 0 18 0 2149.0071 Q96HY7 Q96HY7 835 852 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes yes 2 8.7151E-05 131.32 By MS/MS 4 0 2 2 438190 438190 0 14754 2198 15654;15655 37446;37447 26470;26471 26470 1404 2 11962 0 VEENFLK LNREGKQKADKNRARVEENFLKLTHVQRQE KADKNRARVEENFLKLTHVQRQEAAQSRRE R V E L K L 0 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 877.45453 Q96A33 Q96A33 413 419 CCDC47 Coiled-coil domain-containing protein 47 yes yes 2 0.013964 143.02 By MS/MS 5.5 0.5 1 1 2 4140500 4140500 0 14755 2114 15656 37448;37449 26472 26472 1 36679 0 VEEQEPELTSTPNFVVEVIK PPTFDGEEEPSQGQKVEEQEPELTSTPNFV PELTSTPNFVVEVIKNDDGKKALVLDCHYP K V E I K N 0 0 1 0 0 1 5 0 0 1 1 1 0 1 2 1 2 0 0 4 0 0 20 0 2286.1631 Q07021 Q07021 155 174 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 2;3 0.00044843 155.37 By MS/MS By matching 8.67 0.745 3 2 1 5 1 6636200 6602900 33375 14756 1279 15657 37450;37451;37452;37453;37454;37455 26473;26474;26475 26474 3 597200 284730 VEEQEPELTSTPNFVVEVIKNDDGKK PPTFDGEEEPSQGQKVEEQEPELTSTPNFV PNFVVEVIKNDDGKKALVLDCHYPEDEVGQ K V E K K A 0 0 2 2 0 1 5 1 0 1 1 3 0 1 2 1 2 0 0 4 0 0 26 2 2943.4713 Q07021 Q07021 155 180 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 4 0.048507 35.628 By MS/MS 8.5 0.5 1 1 2 1560200 1560200 0 14757 1279 15658 37456;37457 26476 26476 1 134490 0 VEERDPPR EVSSWRRADDRKDDRVEERDPPRRVPPPAL DDRKDDRVEERDPPRRVPPPALSRDRERDR R V E P R R 0 2 0 1 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 8 1 996.49886 Q14152 Q14152 1321 1328 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.041929 91.9 By MS/MS 3 0 1 1 260160 260160 0 14758 1409 15659 37458 26477 26477 1 6791.6 0 VEESYAMPTK YAQYVHNLCNSLSIKVEESYAMPTKTIEVL SLSIKVEESYAMPTKTIEVLQLQDQGSKML K V E T K T 1 0 0 0 0 0 2 0 0 0 0 1 1 0 1 1 1 0 1 1 0 0 10 0 1153.5325 Q96GC5 Q96GC5 121 130 MRPL48 39S ribosomal protein L48, mitochondrial yes yes 2 7.7121E-07 185.81 By MS/MS 9 0 1 1 506940 506940 0 14759 2179 15660 37459 26478 26478 1 290940 0 VEEVELPVEK KANKLDHVVTIIKGKVEEVELPVEKVDIII IIKGKVEEVELPVEKVDIIISEWMGYCLFY K V E E K V 0 0 0 0 0 0 4 0 0 0 1 1 0 0 1 0 0 0 0 3 0 0 10 0 1169.618 Q99873;Q9NR22 Q99873 146 155 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 2 0.0089964 100.02 By MS/MS 7 0 1 1 1958200 1958200 0 14760 2296 15661 37460 26479;26480 26480 2 34994 0 VEFILEQMR ELQVETYGSMEKKERVEFILEQMRLCLAVK MEKKERVEFILEQMRLCLAVKDYIRTQIIS R V E M R L 0 1 0 0 0 1 2 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 9 0 1163.6009 O00232 O00232 183 191 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 3.5436E-06 182.98 By MS/MS 6 0 1 1 1188000 1188000 0 14761 81 15662 37461 26481 26481 1 9264.4 0 VEFMDDTSR VLGRTGSQGQCTQVRVEFMDDTSRSIIRNV QCTQVRVEFMDDTSRSIIRNVKGPVREGDV R V E S R S 0 1 0 2 0 0 1 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 9 0 1098.4652 P62857 P62857 32 40 RPS28 40S ribosomal protein S28 yes yes 2 0.0034229 115.71 By MS/MS By matching 10 0 3 2 1 894790 837180 57610 14762 1152 15663;15664 37462;37463;37464 26482;26483 26482 902 2 889830 1477700 VEGDNDKKNPR VIQEIVDKSGVVRVRVEGDNDKKNPREEGM VRVRVEGDNDKKNPREEGMVPFIFVGTREN R V E P R E 0 1 2 2 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 11 2 1270.6266 P51116 P51116 328 338 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.0011323 87.667 By MS/MS 3 0 1 1 0 0 0 14763 958 15665 37465 26484 26484 1 0 0 VEGGTPLFTLR ANGVIEALLVPDGGKVEGGTPLFTLRKTGA DGGKVEGGTPLFTLRKTGAAPAKAKPAEAP K V E L R K 0 1 0 0 0 0 1 2 0 0 2 0 0 1 1 0 2 0 0 1 0 0 11 0 1188.6503 P36957 P36957 134 144 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 2 0.00025587 148.91 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 7424800 7274000 150860 14764 812 15666 37466;37467;37468 26485;26486 26485 2 64019 462680 VEGPGSLGLEESGSR RNMVQTAVVPVKKKRVEGPGSLGLEESGSR VEGPGSLGLEESGSRRMQNFAFSGGLYGGL R V E S R R 0 1 0 0 0 0 3 4 0 0 2 0 0 0 1 3 0 0 0 1 0 0 15 0 1472.7107 Q12972 Q12972 238 252 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes yes 2 3.3204E-10 190.35 By MS/MS 6.5 0.5 1 1 2 1765200 1765200 0 14765 1319 15667 37469;37470 26487 26487 1 26895 0 VEGRPGASLPPLDLQALEK FPEPFRSKVLKDLPRVEGRPGASLPPLDLQ PGASLPPLDLQALEKELVDRHGEEVTPEDV R V E E K E 2 1 0 1 0 1 2 2 0 0 4 1 0 0 3 1 0 0 0 1 0 0 19 1 1989.0895 P11498 P11498 974 992 PC Pyruvate carboxylase, mitochondrial yes yes 3 0.0051002 77.08 By MS/MS 4.5 0.5 1 1 2 1595900 1595900 0 14766 555 15668 37471;37472 26488 26488 1 44959 0 VEGTDVTGIEEVVIPK ARSCRFYSGSATLSKVEGTDVTGIEEVVIP EGTDVTGIEEVVIPKKKTWDKVAVLQALAS K V E P K K 0 0 0 1 0 0 3 2 0 2 0 1 0 0 1 0 2 0 0 4 0 0 16 0 1683.8931 Q96EY7 Q96EY7 46 61 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 1.3115E-14 201.38 By MS/MS 6 0.816 1 1 1 3 8578900 8578900 0 14767 2170 15669 37473;37474;37475 26489;26490 26489 2 313950 0 VEHHDHAVVSGR GDAACFYDIKLGRRRVEHHDHAVVSGRLAG RRRVEHHDHAVVSGRLAGENMTGAAKPYWH R V E G R L 1 1 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1341.6538 O95831 O95831 452 463 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2;3 7.6042E-05 155.47 By MS/MS 5.33 0.471 2 1 3 4124300 4124300 0 14768 409 15670 37476;37477;37478 26491;26492 26491 2 126550 0 VEHIEWFR TCGLSKNPYLSVKQKVEHIEWFRNYFNEKK YLSVKQKVEHIEWFRNYFNEKKDILKESNI K V E F R N 0 1 0 0 0 0 2 0 1 1 0 0 0 1 0 0 0 1 0 1 0 0 8 0 1114.556 Q92665 Q92665 370 377 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2;3 0.020555 106.04 By MS/MS 7 0 2 2 2501500 2501500 0 14769 2073 15671 37479;37480 26493;26494 26494 2 44703 0 VEIATLTR VLNKTMDVSKLSAEKVEIATLTRENGKTVI SKLSAEKVEIATLTRENGKTVIRVLKQKEV K V E T R E 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 8 0 901.52328 P25789 P25789 211 218 PSMA4 Proteasome subunit alpha type-4 yes yes 2 0.01563 112.41 By MS/MS By matching 8.75 0.829 2 1 1 3 1 4429100 4345400 83765 14770 691 15672 37481;37482;37483;37484 26495 26495 1 401600 714620 VEILANDQGNR LGTTYSCVGVFQQGRVEILANDQGNRTTPS QQGRVEILANDQGNRTTPSYVAFTDTERLV R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 P17066;P48741 P17066 28 38 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 2 3.751E-07 188.99 By MS/MS By matching 6.89 1.91 1 2 1 1 2 1 1 8 1 84901000 84620000 280990 14771 611 15673 37485;37486;37487;37488;37489;37490;37491;37492;37493 26496;26497;26498;26499;26500;26501 26500 6 4615100 831440 VEILPVPYVTEASR RPLTRRVQLLRPLSRVEILPVPYVTEASRL RVEILPVPYVTEASRLTVLLPLAAAERDLA R V E S R L 1 1 0 0 0 0 2 0 0 1 1 0 0 0 2 1 1 0 1 3 0 0 14 0 1571.8559 Q8IZ52 Q8IZ52 494 507 CHPF Chondroitin sulfate synthase 2 yes yes 2 0.0065366 100.04 By MS/MS 5 0.816 1 1 1 3 1502400 1502400 0 14772 1884 15674 37494;37495;37496 26502 26502 1 39217 0 VEKEEAGGGISEEEAAQYDR ______________________________ AGGGISEEEAAQYDRQIRLWGLEAQKRLRA M V E D R Q 3 1 0 1 0 1 6 3 0 1 0 1 0 0 0 1 0 0 1 1 0 0 20 1 2165.9713 Q9UBE0 Q9UBE0 2 21 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 3 0.0099062 46.808 By MS/MS 7 0 1 1 1178400 1178400 0 14773 2747 15675 37497 26503 26503 1 21059 0 VEKIPGGIIEDSCVLR EENGRKEIDIKKYARVEKIPGGIIEDSCVL EKIPGGIIEDSCVLRGVMINKDVTHPRMRR R V E L R G 0 1 0 1 1 0 2 2 0 3 1 1 0 0 1 1 0 0 0 2 0 0 16 1 1783.9502 P49368 P49368 201 216 CCT3 T-complex protein 1 subunit gamma yes yes 2;3 3.6596E-06 163.62 By MS/MS 6 0.816 2 2 2 6 77206000 77206000 0 14774 916 15676 37498;37499;37500;37501;37502;37503 26504;26505;26506;26507;26508;26509;26510;26511;26512 26506 9 758350 0 VEKVTISNR FENLCKLMKEILDKKVEKVTISNRLVSSPC EILDKKVEKVTISNRLVSSPCCIVTSTYGW K V E N R L 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 2 0 0 9 1 1044.5928 P08238;Q58FF7 P08238 575 583 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.048528 129.42 By MS/MS 7 1.41 1 1 1 1 1 5 12094000 12094000 0 14775 501 15677 37504;37505;37506;37507;37508 26513 26513 1 517830 0 VELPGTAVPSVPEDAAPASR GVGETPSAAALAAARVELPGTAVPSVPEDA TAVPSVPEDAAPASRDGGGVRDEGPAAAGD R V E S R D 4 1 0 1 0 0 2 1 0 0 1 0 0 0 4 2 1 0 0 3 0 0 20 0 1962.0058 P55011 P55011 32 51 SLC12A2 Solute carrier family 12 member 2 yes yes 2 0.057939 74.678 By MS/MS 1 0 1 1 188590 188590 0 14776 1022 15678 37509 26514 26514 1 9214 0 VELQQGLR VGFSSQLYGYALLGKVELQQGLRAVYHNMP GYALLGKVELQQGLRAVYHNMPLIWKPGYL K V E L R A 0 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 941.52943 Q92552 Q92552 234 241 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 2 0.0080258 125.81 By MS/MS 7.5 1.12 1 1 1 1 4 26797000 26797000 0 14777 2059 15679 37510;37511;37512;37513 26515 26515 1 1015400 0 VELSEQQLQLWPSDVDK TISALFVTPKTTGARVELSEQQLQLWPSDV LSEQQLQLWPSDVDKLSPTDNLPRGSRAHI R V E D K L 0 0 0 2 0 3 2 0 0 0 3 1 0 0 1 2 0 1 0 2 0 0 17 0 2013.0055 P09543 P09543 300 316 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes yes 2 2.6973E-10 159.58 By MS/MS 6.5 0.5 1 1 2 1251400 1251400 0 14778 516 15680 37514;37515 26516 26516 1 15309 0 VELSTVNVR ENTKKDLLGIIKGMKVELSTVNVRTTKPPK IIKGMKVELSTVNVRTTKPPKRRPLKSLEA K V E V R T 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 3 0 0 9 0 1015.5662 Q92665 Q92665 108 116 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 2 0.0039402 134.05 By MS/MS 7.5 0.5 1 1 2 9834200 9834200 0 14779 2073 15681 37516;37517 26517 26517 1 310530 0 VELVPPTPAEIPR TYSKPRLATFWYYAKVELVPPTPAEIPRAI AKVELVPPTPAEIPRAIQSLKKIVNSAQTG K V E P R A 1 1 0 0 0 0 2 0 0 1 1 0 0 0 4 0 1 0 0 2 0 0 13 0 1416.7977 O75964 O75964 36 48 ATP5L ATP synthase subunit g, mitochondrial yes yes 2 0.036305 91.469 By MS/MS 10 0 1 1 4300600 4300600 0 14780 341 15682 37518 26518;26519 26519 2 4571100 0 VEMALEALR AAKVESEQHGDRLPRVEMALEALRNVIKYN GDRLPRVEMALEALRNVIKYNPGSESECIG R V E L R N 2 1 0 0 0 0 2 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 9 0 1030.5481 O75165 O75165 1749 1757 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0055349 108.98 By MS/MS 2 0 1 1 131390 131390 0 14781 287 15683 37519 26520 26520 159 1 6531 0 VENAGGSPSPEPAGR RGWAAAARAAQRRRRVENAGGSPSPEPAGR VENAGGSPSPEPAGRRAALYVHWPYCEKRC R V E G R R 2 1 1 0 0 0 2 3 0 0 0 0 0 0 3 2 0 0 0 1 0 0 15 0 1423.6692 Q9HA92 Q9HA92 24 38 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial yes yes 2 4.6376E-11 194.86 By MS/MS 7 0 1 1 1154600 1154600 0 14782 2541 15684 37520 26521 26521 1 20633 0 VENLFNEK SFEAWNAKITDLKQKVENLFNEKCGEALGL ITDLKQKVENLFNEKCGEALGLKQAVKVPF K V E E K C 0 0 2 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 991.49746 P78347 P78347 737 744 GTF2I General transcription factor II-I yes yes 2 0.044258 93.598 By MS/MS 3.5 0.5 1 1 2 1110200 1110200 0 14783 1194 15685 37521;37522 26522 26522 1 29187 0 VENLQAVQTDFSSDPLQK KKCGAETQHEGLELRVENLQAVQTDFSSDP LQAVQTDFSSDPLQKVVCFNHDNTLLATGG R V E Q K V 1 0 1 2 0 3 1 0 0 0 2 1 0 1 1 2 1 0 0 2 0 0 18 0 2017.9956 Q9HCU5 Q9HCU5 141 158 PREB Prolactin regulatory element-binding protein yes yes 2 2.2316E-33 297.45 By MS/MS 7 0 1 1 1720700 1720700 0 14784 2565 15686 37523 26523 26523 1 30749 0 VENMVDQLLR DTPLIYKAVPSWFVRVENMVDQLLRNNDLC SWFVRVENMVDQLLRNNDLCYWVPELVREK R V E L R N 0 1 1 1 0 1 1 0 0 0 2 0 1 0 0 0 0 0 0 2 0 0 10 0 1215.6282 P41252 P41252 419 428 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 8.8213E-05 166.97 By MS/MS 3.8 0.748 2 2 1 5 9274900 9274900 0 14785 840 15687;15688 37524;37525;37526;37527;37528 26524;26525;26526 26525 598 3 244980 0 VENSPQVDGSPPGLEGLLGGIGEK EIEVEKMRRAEASARVENSPQVDGSPPGLE SPPGLEGLLGGIGEKGVHRPAPRNHEQRLE R V E E K G 0 0 1 1 0 1 3 6 0 1 3 1 0 0 3 2 0 0 0 2 0 0 24 0 2348.186 Q8WVB6 Q8WVB6 862 885 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.0043137 68.481 By MS/MS 4 0 1 1 164830 164830 0 14786 2027 15689 37529 26527 26527 1 4499.8 0 VENYPEVIR LARLKSNYQLGELVKVENYPEVIRLIANFT LGELVKVENYPEVIRLIANFTVTSLQHWEF K V E I R L 0 1 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 2 0 0 9 0 1117.5768 Q9UIA9 Q9UIA9 349 357 XPO7 Exportin-7 yes yes 2 0.0068847 111.61 By MS/MS 4 0 1 1 789510 789510 0 14787 2790 15690 37530 26528 26528 1 21553 0 VEPGLGADNSVVR ASKIVGPSGAAVPCKVEPGLGADNSVVRFL CKVEPGLGADNSVVRFLPREEGPYEVEVTY K V E V R F 1 1 1 1 0 0 1 2 0 0 1 0 0 0 1 1 0 0 0 3 0 0 13 0 1311.6783 P21333 P21333 1020 1032 FLNA Filamin-A yes yes 2 0.056319 75.819 By MS/MS 2.5 1.12 1 1 1 1 4 1599300 1599300 0 14788 648 15691 37531;37532;37533;37534 26529 26529 1 63931 0 VEQESLLTAFR IGVAVDLILLFRELRVEQESLLTAFRCGLQ RELRVEQESLLTAFRCGLQFLGNIASRNED R V E F R C 1 1 0 0 0 1 2 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 11 0 1291.6772 Q9UBB4 Q9UBB4 123 133 ATXN10 Ataxin-10 yes yes 2 1.8729E-06 195.83 By MS/MS 7 0 1 1 0 0 0 14789 2744 15692 37535 26530 26530 1 0 0 VEQHVVDGK LDLHVIYDVSHNIAKVEQHVVDGKERTLLV SHNIAKVEQHVVDGKERTLLVHRKGSTRAF K V E G K E 0 0 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 3 0 0 9 0 1009.5193 Q9Y3I0 Q9Y3I0 358 366 RTCB tRNA-splicing ligase RtcB homolog yes yes 2 0.017689 98.04 By MS/MS By matching 6 0.707 1 2 1 2 2 893770 878960 14806 14790 2938 15693 37536;37537;37538;37539 26531 26531 1 7975.6 44396 VEQHVVDGKER LDLHVIYDVSHNIAKVEQHVVDGKERTLLV NIAKVEQHVVDGKERTLLVHRKGSTRAFPP K V E E R T 0 1 0 1 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 3 0 0 11 1 1294.663 Q9Y3I0 Q9Y3I0 358 368 RTCB tRNA-splicing ligase RtcB homolog yes yes 3 0.021045 89.189 By MS/MS 6 0 1 1 1218400 1218400 0 14791 2938 15694 37540 26532 26532 1 9501 0 VEQLGAEGNVEESQK RVHELNEEIGKLLAKVEQLGAEGNVEESQK VEQLGAEGNVEESQKVMDEVEKARAKKREA K V E Q K V 1 0 1 0 0 2 4 2 0 0 1 1 0 0 0 1 0 0 0 2 0 0 15 0 1615.7689 Q9Y383 Q9Y383 140 154 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 2 1.6861E-29 250.81 By MS/MS 6.5 0.5 1 1 2 2443800 2443800 0 14792 2917 15695 37541;37542 26533 26533 1 27635 0 VEQMFQILLDPEEK QIQEKVRYMSSTDAKVEQMFQILLDPEEKG KVEQMFQILLDPEEKGTEKKQKASQNLVVL K V E E K G 0 0 0 1 0 2 3 0 0 1 2 1 1 1 1 0 0 0 0 1 0 0 14 0 1717.8597 Q9H3U1 Q9H3U1 153 166 UNC45A Protein unc-45 homolog A yes yes 2 0.00066629 129.77 By MS/MS 4 0 1 1 206680 206680 0 14793 2493 15696 37543 26534 26534 1 5642.1 0 VEQNAAPSHTK CTGARQLQDAAAKQKVEQNAAPSHTKFSIY AKQKVEQNAAPSHTKFSIYPPIPGEESSLR K V E T K F 2 0 1 0 0 1 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1180.5836 P82912 P82912 49 59 MRPS11 28S ribosomal protein S11, mitochondrial yes yes 2;3 8.6297E-05 163.9 By MS/MS 10 0 2 2 480250 480250 0 14794 1206 15697 37544;37545 26535;26536 26535 2 510450 0 VEQVLSLEPQHELK ______________________________ KVEQVLSLEPQHELKFRGPFTDVVTTNLKL K V E L K F 0 0 0 0 0 2 3 0 1 0 3 1 0 0 1 1 0 0 0 2 0 0 14 0 1647.8832 O95292 O95292 4 17 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 4.8802E-18 222.2 By MS/MS 8 0 1 1 1763400 1763400 0 14795 381 15698 37546 26537 26537 1 116330 0 VESLEQEAANER PKADKKAVIQHFQEKVESLEQEAANERQQL QEKVESLEQEAANERQQLVETHMARVEAML K V E E R Q 2 1 1 0 0 1 4 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1373.6423 P05067 P05067 439 450 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes yes 2 2.7367E-05 189.57 By MS/MS 4 0.816 1 1 1 3 1856600 1856600 0 14796 465 15699 37547;37548;37549 26538 26538 1 54536 0 VESPVLPPVLVPR SKQKEVCINPYHYKRVESPVLPPVLVPRHN KRVESPVLPPVLVPRHNEFNPQHSLLVQFR R V E P R H 0 1 0 0 0 0 1 0 0 0 2 0 0 0 4 1 0 0 0 4 0 0 13 0 1400.8391 Q99717;Q15797 Q99717 131 143 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 yes no 2 0.009811 95.573 By MS/MS 6.5 0.5 1 1 2 1630700 1630700 0 14797 1522 15700 37550;37551 26539 26539 1 14033 0 VETDHIVAAVGLEPNVELAK VSSGKLLIKLKDGRKVETDHIVAAVGLEPN IVAAVGLEPNVELAKTGGLEIDSDFGGFRV K V E A K T 3 0 1 1 0 0 3 1 1 1 2 1 0 0 1 0 1 0 0 4 0 0 20 0 2103.1212 O95831 O95831 389 408 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.053159 50.916 By MS/MS 5.5 0.5 1 1 2 2119100 2119100 0 14798 409 15701 37552;37553 26540 26540 1 46742 0 VETFSGVYK KVHLDKAQQNNVEHKVETFSGVYKKLTGKD NNVEHKVETFSGVYKKLTGKDVNFEFPEFQ K V E Y K K 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 9 0 1028.5179 P62081 P62081 170 178 RPS7 40S ribosomal protein S7 yes yes 2 0.0025412 123.98 By MS/MS 9 0 1 1 1442300 1442300 0 14799 1113 15702 37554 26541 26541 1 827760 0 VETGVLKPGMVVTFAPVNVTTEVK DVYKIGGIGTVPVGRVETGVLKPGMVVTFA MVVTFAPVNVTTEVKSVEMHHEALSEALPG R V E V K S 1 0 1 0 0 0 2 2 0 0 1 2 1 1 2 0 4 0 0 7 0 0 24 1 2514.3767 Q5VTE0;P68104 Q5VTE0 267 290 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 3 0.015753 52.227 By MS/MS 6.33 0.471 2 1 3 8020800 8020800 0 14800 1184 15703;15704 37555;37556;37557 26542;26543 26542 924 2 67586 0 VETPVLPPVLVPR MKKDEVCVNPYHYQRVETPVLPPVLVPRHT QRVETPVLPPVLVPRHTEIPAEFPPLDDYS R V E P R H 0 1 0 0 0 0 1 0 0 0 2 0 0 0 4 0 1 0 0 4 0 0 13 0 1414.8548 P84022;Q15796;O15198 P84022 130 142 SMAD3;SMAD2;SMAD9 Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 9 yes no 2 0.0048539 104.22 By MS/MS 6.5 0.5 1 1 2 848820 848820 0 14801 158 15705 37558;37559 26544 26544 1 7290.4 0 VETTEDLVAK VISVEDPPQRTAGVKVETTEDLVAKLKEIG TAGVKVETTEDLVAKLKEIGRI________ K V E A K L 1 0 0 1 0 0 2 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 10 0 1103.571 P38117 P38117 239 248 ETFB Electron transfer flavoprotein subunit beta yes yes 2 0.0059958 104.2 By MS/MS 7.5 0.5 1 1 2 1584300 1584300 0 14802 816 15706 37560;37561 26545 26545 1 83005 0 VETYLNENLR QLLNERIKLEGIITRVETYLNENLRKRLDQ GIITRVETYLNENLRKRLDQVEQELNELRE R V E L R K 0 1 2 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 10 0 1249.6303 Q9UQE7 Q9UQE7 828 837 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 1.3002E-06 179.1 By MS/MS By matching 2.6 1.36 1 2 1 1 3 2 2432300 2356500 75724 14803 2860 15707 37562;37563;37564;37565;37566 26546 26546 1 67115 68098 VETYLNENLRK QLLNERIKLEGIITRVETYLNENLRKRLDQ IITRVETYLNENLRKRLDQVEQELNELRET R V E R K R 0 1 2 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 1 0 0 11 1 1377.7252 Q9UQE7 Q9UQE7 828 838 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.017779 109.44 By MS/MS 3 0 1 1 644690 644690 0 14804 2860 15708 37567 26547 26547 1 16830 0 VEVAVESQR QDGYKLHGRTIRLARVEVAVESQRRL____ TIRLARVEVAVESQRRL_____________ R V E Q R R 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 9 0 1015.5298 Q8TAA5 Q8TAA5 215 223 GRPEL2 GrpE protein homolog 2, mitochondrial yes yes 2 0.0068847 111.61 By MS/MS 8.5 0.5 1 1 2 2496000 2496000 0 14805 1979 15709 37568;37569 26548 26548 1 1285300 0 VEVEEDGQLK RKITTKRIVENGQERVEVEEDGQLKSLTIN NGQERVEVEEDGQLKSLTINGVADDDALAE R V E L K S 0 0 0 1 0 1 3 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 10 0 1144.5612 O75190;Q8NHS0 O75190 216 225 DNAJB6;DNAJB8 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 8 no no 2 0.018824 93.178 By MS/MS 8 0 1 1 392300 392300 0 14806 291 15710 37570 26549 26549 1 25880 0 VEVGTEVTDYR PCANHKMHLYLGAAKVEVGTEVTDYRFFVR GAAKVEVGTEVTDYRFFVRAIIRHSDLVTK K V E Y R F 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 0 2 0 1 3 0 0 11 0 1266.6092 Q13085 Q13085 1410 1420 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 4.2822E-05 170.47 By MS/MS 1 0 1 1 136990 136990 0 14807 1332 15711 37571 26550 26550 1 6693 0 VEVTEFEDIK LLGEEDEEALHYLTRVEVTEFEDIKSGYRI HYLTRVEVTEFEDIKSGYRIDFYFDENPYF R V E I K S 0 0 0 1 0 0 3 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1207.5972 Q01105;P0DME0 Q01105 123 132 SET;SETSIP Protein SET;Protein SETSIP yes no 2 0.00015166 159.79 By MS/MS 7 0 1 1 3034400 3034400 0 14808 527 15712 37572 26551 26551 1 54226 0 VEVYPVELLLVR PPIERKVIELPNIQKVEVYPVELLLVRHND IQKVEVYPVELLLVRHNDLGKSHTVQFSHT K V E V R H 0 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 0 1 4 0 0 12 0 1427.8388 P51784 P51784 192 203 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.036599 78.556 By MS/MS 4 0 1 1 146170 146170 0 14809 976 15713 37573 26552 26552 1 3990.2 0 VEYSEEELKTHISK KRKHDNEGSGSKRPKVEYSEEELKTHISKG KVEYSEEELKTHISKGTLGKFTVPMLKEAC K V E S K G 0 0 0 0 0 0 4 0 1 1 1 2 0 0 0 2 1 0 1 1 0 0 14 1 1690.8414 P12956 P12956 557 570 XRCC6 X-ray repair cross-complementing protein 6 yes yes 4 0.018902 70.628 By MS/MS 5 0 1 1 3226900 3226900 0 14810 569 15714 37574 26553 26553 1 132640 0 VEYTLGEESEAPGQR LPEGQDIGAFVAEQKVEYTLGEESEAPGQR VEYTLGEESEAPGQRALPSEELNRQLEKLL K V E Q R A 1 1 0 0 0 1 4 2 0 0 1 0 0 0 1 1 1 0 1 1 0 0 15 0 1663.7689 Q04637 Q04637 1422 1436 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 9.8398E-50 322.27 By MS/MS 3.75 1.98 1 2 1 1 1 1 1 8 33409000 33409000 0 14811 1264 15715 37575;37576;37577;37578;37579;37580;37581;37582 26554;26555;26556;26557;26558 26555 5 1518300 0 VFAAECVCR DEKSHPFTNPRWATRVFAAECVCRIINQCE PRWATRVFAAECVCRIINQCENANSAHFDI R V F C R I 2 1 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 9 0 1110.495 Q86XA9 Q86XA9 1221 1229 HEATR5A HEAT repeat-containing protein 5A yes yes 2 0.0061292 113.26 By MS/MS 2 0 1 1 313170 313170 0 14812 1838 15716 37583 26559 26559 1 15566 0 VFADYEAYVK FKDIINMLFYHDRFKVFADYEAYVKCQDKV HDRFKVFADYEAYVKCQDKVSQLYMNPKAW K V F V K C 2 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 2 2 0 0 10 0 1203.5812 P06737 P06737 774 783 PYGL Glycogen phosphorylase, liver form yes yes 2 0.016398 96.668 By MS/MS 4 0 1 1 0 0 0 14813 483 15717 37584 26560 26560 1 0 0 VFAEYPGSSAQLR GFMDFICSLVTKSVKVFAEYPGSSAQLRVL VKVFAEYPGSSAQLRVLLAFYASTIVSALV K V F L R V 2 1 0 0 0 1 1 1 0 0 1 0 0 1 1 2 0 0 1 1 0 0 13 0 1423.7096 Q9H583 Q9H583 202 214 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes yes 2 0.013389 114.4 By MS/MS 1.5 0.5 1 1 2 495960 495960 0 14814 2503 15718 37585;37586 26561 26561 1 24541 0 VFANAPDSACVIGLK LWLSEKLREVYRKGRVFANAPDSACVIGLK VFANAPDSACVIGLKKKAVAFSPVTELKKD R V F L K K 3 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 2 0 0 15 0 1560.797 P17858 P17858 699 713 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 2 5.6604E-07 158.3 By MS/MS 3.5 2.06 1 1 1 1 4 3718600 3718600 0 14815 617 15719 37587;37588;37589;37590 26562;26563;26564;26565 26564 4 141410 0 VFANPEDCVAFGK MLMSTATAFYRLTRKVFANPEDCVAFGKGE RKVFANPEDCVAFGKGENAKKYLRTDDRVE K V F G K G 2 0 1 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 0 2 0 0 13 0 1452.6708 P10620 P10620 43 55 MGST1 Microsomal glutathione S-transferase 1 yes yes 2 1.3066E-08 194.48 By MS/MS 9.5 0.5 1 1 2 1554200 1554200 0 14816 541 15720 37591;37592 26566 26566 1 1604800 0 VFASELNAGIIK WDSLRSGPASTFNDRVFASELNAGIIKTDQ NDRVFASELNAGIIKTDQNYEKMMFKEALK R V F I K T 2 0 1 0 0 0 1 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 12 0 1260.7078 Q9P2J5 Q9P2J5 796 807 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 4.3369E-18 232.88 By MS/MS 2.5 1.12 1 1 1 1 4 11555000 11555000 0 14817 2738 15721 37593;37594;37595;37596 26567;26568 26567 2 305570 0 VFDAIMNFK LPRTFCQLILDPIFKVFDAIMNFKKEETAK LDPIFKVFDAIMNFKKEETAKLIEKLDIKL K V F F K K 1 0 1 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 9 0 1083.5423 P13639 P13639 300 308 EEF2 Elongation factor 2 yes yes 2 0.016628 118.74 By MS/MS 4 0.707 1 2 1 4 3599500 3599500 0 14818 576 15722;15723 37597;37598;37599;37600 26569;26570 26569 371 2 103670 0 VFDFLVDSINK ACYTRDALAKALHARVFDFLVDSINKAMEK LHARVFDFLVDSINKAMEKDHEEYNIGVLD R V F N K A 0 0 1 2 0 0 0 0 0 1 1 1 0 2 0 1 0 0 0 2 0 0 11 0 1295.6762 Q12965 Q12965 363 373 MYO1E Unconventional myosin-Ie yes yes 2 0.0043689 110.38 By MS/MS 4 0 1 1 229660 229660 0 14819 1318 15724 37601 26571 26571 1 6269.5 0 VFDIPSDECIK LKNADPERVENQIEKVFDIPSDECIKISAK QIEKVFDIPSDECIKISAKLGTNVESVLQA K V F I K I 0 0 0 2 1 0 1 0 0 2 0 1 0 1 1 1 0 0 0 1 0 0 11 0 1321.6224 Q8N442 Q8N442 213 223 GUF1 Translation factor GUF1, mitochondrial yes yes 2 0.0062177 102.62 By MS/MS 5 0 1 1 1992200 1992200 0 14820 1913 15725 37602 26572 26572 1 81888 0 VFDKDGNGYISAAELR MKDTDSEEEIREAFRVFDKDGNGYISAAEL FDKDGNGYISAAELRHVMTNLGEKLTDEEV R V F L R H 2 1 1 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 1 1 0 0 16 1 1753.8635 P0DP25;P0DP24;P0DP23 P0DP25 92 107 yes no 3 0.012764 76.051 By MS/MS 9.5 0.5 1 1 2 1192800 1192800 0 14821 531 15726 37603;37604 26573 26573 1 1145600 0 VFDLQFSTDSPR QNDDEKERLQRRRSRVFDLQFSTDSPRLLA RSRVFDLQFSTDSPRLLASPSSRSIDISAT R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 Q15003 Q15003 72 83 NCAPH Condensin complex subunit 2 yes yes 2 1.8679E-16 218.55 By MS/MS 4 0 1 1 1090700 1090700 0 14822 1457 15727 37605 26574 26574 1 29774 0 VFDMLNR LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI IIVGTPGRVFDMLNRRYLSPKYIKMFVLDE R V F N R R 0 1 1 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 7 0 893.44292 P60842;Q14240 P60842 162 168 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.012527 131.04 By MS/MS 5.26 2.75 2 2 2 2 2 2 2 2 2 1 19 387510000 387510000 0 14823 1074 15728;15729 37606;37607;37608;37609;37610;37611;37612;37613;37614;37615;37616;37617;37618;37619;37620;37621;37622;37623;37624 26575;26576;26577;26578;26579;26580;26581;26582;26583;26584 26575 849 10 5523400 0 VFDMLNRR LQMEAPHIIVGTPGRVFDMLNRRYLSPKYI IVGTPGRVFDMLNRRYLSPKYIKMFVLDEA R V F R R Y 0 2 1 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 8 1 1049.544 P60842;Q14240 P60842 162 169 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.035754 121.29 By MS/MS 6 0.816 1 1 1 3 466030000 466030000 0 14824 1074 15730 37625;37626;37627 26585;26586 26585 2 3758800 0 VFDPALNLFK QDGVFKEFLEEIIKRVFDPALNLFKTTSGD EIIKRVFDPALNLFKTTSGDERLYPSPTSY R V F F K T 1 0 1 1 0 0 0 0 0 0 2 1 0 2 1 0 0 0 0 1 0 0 10 0 1162.6386 Q7Z3V4 Q7Z3V4 742 751 UBE3B Ubiquitin-protein ligase E3B yes yes 2 0.005591 105.52 By MS/MS 4 0 1 1 254980 254980 0 14825 1787 15731 37628 26587 26587 1 6960.6 0 VFDPVPVGVTK ILPLHSQIPREEQRKVFDPVPVGVTKVILS EQRKVFDPVPVGVTKVILSTNIAETSITIN K V F T K V 0 0 0 1 0 0 0 1 0 0 0 1 0 1 2 0 1 0 0 4 0 0 11 0 1156.6492 Q08211 Q08211 698 708 DHX9 ATP-dependent RNA helicase A yes yes 2 0.0076545 100.48 By MS/MS 3.25 1.48 1 1 1 1 4 4021000 4021000 0 14826 1287 15732 37629;37630;37631;37632 26588;26589 26589 2 120860 0 VFDYSEYWEGAR CTRGTPLDTEVPMERVFDYSEYWEGARGLY MERVFDYSEYWEGARGLYAAFDCTATMKSG R V F A R G 1 1 0 1 0 0 2 1 0 0 0 0 0 1 0 1 0 1 2 1 0 0 12 0 1520.6572 P11498 P11498 831 842 PC Pyruvate carboxylase, mitochondrial yes yes 2 2.6341E-07 219.5 By MS/MS 3.5 0.5 1 1 2 1952100 1952100 0 14827 555 15733 37633;37634 26590 26590 1 53051 0 VFEELQATDK ELPREYLGANWTLEKVFEELQATDKKRVLE WTLEKVFEELQATDKKRVLEENQEHYHIVQ K V F D K K 1 0 0 1 0 1 2 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 10 0 1178.5819 P57740 P57740 492 501 NUP107 Nuclear pore complex protein Nup107 yes yes 2 0.00040831 148.56 By MS/MS 4 0 1 1 1037200 1037200 0 14828 1057 15734 37635 26591 26591 1 28314 0 VFEHDSVELNCK LKQISSNKCFGGLQKVFEHDSVELNCKMKF LQKVFEHDSVELNCKMKFAVYLPPKAETGK K V F C K M 0 0 1 1 1 0 2 0 1 0 1 1 0 1 0 1 0 0 0 2 0 0 12 0 1475.6715 P10768 P10768 18 29 ESD S-formylglutathione hydrolase yes yes 2 3.5439E-07 185.08 By MS/MS 8 0 1 1 2269000 2269000 0 14829 543 15735 37636 26592 26592 1 149690 0 VFEPNEEALGVVLHK RKRTEFAGDKFKEEKVFEPNEEALGVVLHK VFEPNEEALGVVLHKDSKWYQQWKDFKENN K V F H K D 1 0 1 0 0 0 3 1 1 0 2 1 0 1 1 0 0 0 0 3 0 0 15 0 1679.8883 O43615 O43615 223 237 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 1.8662E-05 151.7 By MS/MS 7.5 0.5 2 2 4 31161000 31161000 0 14830 209 15736 37637;37638;37639;37640 26593;26594 26594 2 633890 0 VFEPNEEALGVVLHKDSK RKRTEFAGDKFKEEKVFEPNEEALGVVLHK PNEEALGVVLHKDSKWYQQWKDFKENNVVF K V F S K W 1 0 1 1 0 0 3 1 1 0 2 2 0 1 1 1 0 0 0 3 0 0 18 1 2010.0422 O43615 O43615 223 240 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 4 0.010181 94.544 By MS/MS 7.5 0.5 1 1 2 11418000 11418000 0 14831 209 15737 37641;37642 26595 26595 1 248090 0 VFESIGK ______________________________ ______________________________ K V F G K F 0 0 0 0 0 0 1 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 7 0 778.4225 P35232 P35232 5 11 PHB Prohibitin yes yes 2 0.0085708 157.99 By MS/MS By matching 8 0 2 1 1 24084000 24002000 81681 14832 782 15738 37643;37644 26596 26596 1 1583400 696840 VFEVNASNLEK KKIEKEIQQKWDTERVFEVNASNLEKQTSK DTERVFEVNASNLEKQTSKGKYFVTFPYPY R V F E K Q 1 0 2 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 2 0 0 11 0 1248.635 Q9P2J5 Q9P2J5 29 39 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 2.7312E-07 208.84 By MS/MS By matching 3.2 1.33 1 2 1 1 4 1 24172000 24083000 88381 14833 2738 15739 37645;37646;37647;37648;37649 26597;26598;26599 26598 3 649080 126670 VFFNILEEAR PWESVTFTALGTDRKVFFNILEEARELALQ GTDRKVFFNILEEARELALQQEEGKTVMYT K V F A R E 1 1 1 0 0 0 2 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 10 0 1236.6503 Q9Y276 Q9Y276 146 155 BCS1L Mitochondrial chaperone BCS1 yes yes 2 4.1713E-05 172.23 By MS/MS 7.5 0.5 1 1 2 805450 805450 0 14834 2872 15740 37650;37651 26600;26601 26600 2 19294 0 VFGAPEVLENLEVK AEILLSNHYTSSEIRVFGAPEVLENLEVKS RVFGAPEVLENLEVKSGSPAVLAFAKEKSF R V F V K S 1 0 1 0 0 0 3 1 0 0 2 1 0 1 1 0 0 0 0 3 0 0 14 0 1542.8294 Q8TEM1 Q8TEM1 1711 1724 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.0051283 103.44 By MS/MS 2 0.816 1 1 1 3 252920 252920 0 14835 2002 15741 37652;37653;37654 26602;26603 26602 2 11289 0 VFGAPNVVEDEIDQYLSK GPSSEMETSVPPGFKVFGAPNVVEDEIDQY APNVVEDEIDQYLSKQDGKIYRSRDPQLCR K V F S K Q 1 0 1 2 0 1 2 1 0 1 1 1 0 1 1 1 0 0 1 3 0 0 18 0 2021.9946 Q8TAT6 Q8TAT6 99 116 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 2 1.6088E-10 158.52 By MS/MS 6 0 1 1 248420 248420 0 14836 1984 15742 37655 26604;26605 26605 2 1937.2 0 VFGSLYQDQILEK TDISGSGNNWAVGHKVFGSLYQDQILEKFR HKVFGSLYQDQILEKFRKSAEHCDCLQCFF K V F E K F 0 0 0 1 0 2 1 1 0 1 2 1 0 1 0 1 0 0 1 1 0 0 13 0 1538.7981 Q9UJT0 Q9UJT0 115 127 TUBE1 Tubulin epsilon chain yes yes 2 4.047E-23 218.62 By MS/MS 7 0 1 1 0 0 0 14837 2799 15743 37656 26606 26606 1 0 0 VFGTLLQPVTPSLADK PWLGTVLHVALECLRVFGTLLQPVTPSLAD FGTLLQPVTPSLADKLLSRLGVSASERSLG R V F D K L 1 0 0 1 0 1 0 1 0 0 3 1 0 1 2 1 2 0 0 2 0 0 16 0 1684.94 Q96GW9 Q96GW9 519 534 MARS2 Methionine--tRNA ligase, mitochondrial yes yes 2 1.3476E-10 162.31 By MS/MS 6 0 1 1 2730400 2730400 0 14838 2186 15744 37657 26607 26607 0 21292 0 VFIGNLNTLVVK SNVTNKTDPRSMNSRVFIGNLNTLVVKKSD NSRVFIGNLNTLVVKKSDVEAIFSKYGKIV R V F V K K 0 0 2 0 0 0 0 1 0 1 2 1 0 1 0 0 1 0 0 3 0 0 12 0 1315.7864 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 P07910 18 29 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 2 8.4511E-05 158.47 By MS/MS 7 0 1 1 530280 530280 0 14839 495 15745 37658 26608 26608 1 9476.2 0 VFLALAAK YSPKMQLVCCRAIVKVFLALAAKGPVLRNC CCRAIVKVFLALAAKGPVLRNCISTVVHQG K V F A K G 3 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 831.52182 P78527 P78527 464 471 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.01511 113.08 By MS/MS 3 1.41 1 1 1 1 1 5 3540000 3540000 0 14840 1197 15746 37659;37660;37661;37662;37663 26609;26610;26611 26611 3 159400 0 VFLALVEEVEDR ESPVLTSSCRELLSRVFLALVEEVEDRGTV LSRVFLALVEEVEDRGTVVAQGGGRALIPL R V F D R G 1 1 0 1 0 0 3 0 0 0 2 0 0 1 0 0 0 0 0 3 0 0 12 0 1417.7453 Q9H3U1 Q9H3U1 670 681 UNC45A Protein unc-45 homolog A yes yes 2 0.0011318 131.82 By MS/MS 4 0 1 1 194610 194610 0 14841 2493 15747 37664 26612 26612 1 5312.6 0 VFLENVIR RISGLIYEETRGVLKVFLENVIRDAVTYTE ETRGVLKVFLENVIRDAVTYTEHAKRKTVT K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 P62805 P62805 61 68 HIST1H4A Histone H4 yes yes 2 0.010322 119.27 By MS/MS 10 0 1 1 336960 336960 0 14842 1144 15748 37665 26613 26613 1 358150 0 VFLGNVETFIK KLRINLNLIYDHNPKVFLGNVETFIKQIDS HNPKVFLGNVETFIKQIDSVNHINLFFTEL K V F I K Q 0 0 1 0 0 0 1 1 0 1 1 1 0 2 0 0 1 0 0 2 0 0 11 0 1265.702 O95163 O95163 762 772 IKBKAP Elongator complex protein 1 yes yes 2 9.4644E-05 162.64 By MS/MS 2.5 1.12 1 1 1 1 4 917720 917720 0 14843 368 15749 37666;37667;37668;37669 26614;26615;26616;26617 26616 4 26549 0 VFLLGEEVAQYDGAYK AINQGMDEELERDEKVFLLGEEVAQYDGAY FLLGEEVAQYDGAYKVSRGLWKKYGDKRII K V F Y K V 2 0 0 1 0 1 2 2 0 0 2 1 0 1 0 0 0 0 2 2 0 0 16 0 1800.8934 P11177 P11177 53 68 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 8.013E-21 220.37 By MS/MS 7.67 0.471 1 2 3 1412300 1412300 0 14844 549 15750 37670;37671;37672 26618;26619;26620 26620 3 63823 0 VFNDTCR SVRRTGRIPKKLLQKVFNDTCRSGGLGGSH IPKKLLQKVFNDTCRSGGLGGSHALLLLRS K V F C R S 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 7 0 910.3967 P42704 P42704 108 114 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.023727 119.29 By MS/MS By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 7 1 4256300 4112700 143600 14845 854 15751 37673;37674;37675;37676;37677;37678;37679;37680 26621;26622;26623 26623 3 130140 205810 VFNETPINPR PFQHLEKSAVLQEARVFNETPINPRKCAHI LQEARVFNETPINPRKCAHILTKILYLINQ R V F P R K 0 1 2 0 0 0 1 0 0 1 0 0 0 1 2 0 1 0 0 1 0 0 10 0 1185.6142 Q9Y678 Q9Y678 33 42 COPG1 Coatomer subunit gamma-1 yes yes 2 0.0043802 109.48 By MS/MS 4 0 1 1 8320400 8320400 0 14846 2996 15752 37681 26624 26624 1 227140 0 VFNTGGAPR NARPLVPEVSIKTPRVFNTGGAPRILALDC SIKTPRVFNTGGAPRILALDCGLKYNQIRC R V F P R I 1 1 1 0 0 0 0 2 0 0 0 0 0 1 1 0 1 0 0 1 0 0 9 0 917.47191 P27708 P27708 169 177 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0025322 124.08 By MS/MS 2 0.816 1 1 1 3 2278900 2278900 0 14847 709 15753 37682;37683;37684 26625;26626 26625 2 107480 0 VFNVFCLYGNVEK LMVYGLDQSKMNCDRVFNVFCLYGNVEKVK DRVFNVFCLYGNVEKVKFMKSKPGAAMVEM R V F E K V 0 0 2 0 1 0 1 1 0 0 1 1 0 2 0 0 0 0 1 3 0 0 13 0 1587.7755 P14866 P14866 399 411 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 2 1.6507E-05 199.7 By MS/MS 6 0 1 1 793350 793350 0 14848 593 15754 37685 26627 26627 1 6186.6 0 VFNYNTLER RKNWVVTGADDMQIRVFNYNTLERVHMFEA DDMQIRVFNYNTLERVHMFEAHSDYIRCIA R V F E R V 0 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 9 0 1154.572 P35606 P35606 83 91 COPB2 Coatomer subunit beta yes yes 2 4.4615E-08 203.29 By MS/MS 2.5 1.12 1 1 1 1 4 7823100 7823100 0 14849 795 15755 37686;37687;37688;37689 26628;26629;26630;26631 26628 4 307580 0 VFPGSTTEDYNLIVIER LDLDLTADSQPPVFKVFPGSTTEDYNLIVI PGSTTEDYNLIVIERGAAAAATGQPGTAPA K V F E R G 0 1 1 1 0 0 2 1 0 2 1 0 0 1 1 1 2 0 1 2 0 0 17 0 1951.9891 Q13263 Q13263 508 524 TRIM28 Transcription intermediary factor 1-beta yes yes 2 2.5883E-10 160.27 By MS/MS 5 0.816 1 1 1 3 1952700 1952700 0 14850 1351 15756 37690;37691;37692 26632;26633;26634 26632 3 34120 0 VFQASPEDHEK DWIRHKFTRSRIPEKVFQASPEDHEKYGGD IPEKVFQASPEDHEKYGGDPQNPHKLHIVT K V F E K Y 1 0 0 1 0 1 2 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 11 0 1285.5939 Q8TCC3 Q8TCC3 45 55 MRPL30 39S ribosomal protein L30, mitochondrial yes yes 3 0.017315 103.08 By MS/MS 10 0 1 1 1001600 1001600 0 14851 1993 15757 37693 26635 26635 1 1064500 0 VFQETQK RAHRRFVTKKALCIRVFQETQKLKKRRRAL TKKALCIRVFQETQKLKKRRRALKAAAAAQ R V F Q K L 0 0 0 0 0 2 1 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 7 0 878.44978 P82914 P82914 213 219 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.0052074 178.6 By MS/MS 9 0 1 1 1898600 1898600 0 14852 1207 15758 37694 26636 26636 1 1089600 0 VFQFLNAK IYPGHGRRYARTDGKVFQFLNAKCESAFLS YARTDGKVFQFLNAKCESAFLSKRNPRQIN K V F A K C 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 965.53345 P83731 P83731 28 35 RPL24 60S ribosomal protein L24 yes yes 2 0.0072883 128.57 By MS/MS 8.5 0.5 1 1 2 1061600 1061600 0 14853 1213 15759 37695;37696 26637 26637 1 560370 0 VFQSSTSQEQVYNDCAK EDTVVIASKPYAFDRVFQSSTSQEQVYNDC QSSTSQEQVYNDCAKKIVKDVLEGYNGTIF R V F A K K 1 0 1 1 1 3 1 0 0 0 0 1 0 1 0 3 1 0 1 2 0 0 17 0 1989.8738 P33176 P33176 51 67 KIF5B Kinesin-1 heavy chain yes yes 2 8.9104E-11 171.11 By MS/MS 4 0 1 1 2145500 2145500 0 14854 767 15760 37697 26638 26638 1 58569 0 VFQYGVK IVGLTELQSLAVGPRVFQYGVKVVLQAMYL QSLAVGPRVFQYGVKVVLQAMYLLWKLMWR R V F V K V 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 2 0 0 7 0 839.45414 Q9BT22 Q9BT22 100 106 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes yes 2 0.019116 128.82 By MS/MS 6.5 0.5 1 1 2 2480400 2480400 0 14855 2344 15761 37698;37699 26639 26639 1 39554 0 VFSANSTAACTELAK ______________________________ VFSANSTAACTELAKRITERLGAELGKSVV R V F A K R 4 0 1 0 1 0 1 0 0 0 1 1 0 1 0 2 2 0 0 1 0 0 15 0 1568.7505 Q14558 Q14558 10 24 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 2 4.6877E-10 222.72 By MS/MS 7 0 1 1 890230 890230 0 14856 1435 15762 37700 26640 26640 1 15909 0 VFSDEVQQQAQLSTIR VHPNYHKEPFLQQLKVFSDEVQQQAQLSTI FSDEVQQQAQLSTIRSFLKLYTTMPVAKLA K V F I R S 1 1 0 1 0 4 1 0 0 1 1 0 0 1 0 2 1 0 0 2 0 0 16 0 1847.9377 Q9Y262 Q9Y262 446 461 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 1.8519E-92 336.93 By MS/MS By MS/MS 5.67 2.59 1 1 1 2 3 1 1 1 1 11 1 60983000 60923000 60158 14857 2868 15763 37701;37702;37703;37704;37705;37706;37707;37708;37709;37710;37711;37712 26641;26642;26643;26644;26645;26646;26647;26648 26646 8 1578900 184500 VFSDIGAIQSLK LCAEAAIKSLQGKTKVFSDIGAIQSLKRLV KTKVFSDIGAIQSLKRLVSYSTNGTKSALA K V F L K R 1 0 0 1 0 1 0 1 0 2 1 1 0 1 0 2 0 0 0 1 0 0 12 0 1276.7027 Q6SZW1 Q6SZW1 364 375 SARM1 Sterile alpha and TIR motif-containing protein 1 yes yes 2 0.0027633 117.25 By MS/MS 5 0 1 1 442330 442330 0 14858 1725 15764 37713 26649 26649 1 18182 0 VFSGLVSTGLK MVPTSDKGRFYAFGRVFSGLVSTGLKVRIM AFGRVFSGLVSTGLKVRIMGPNYTPGKKED R V F L K V 0 0 0 0 0 0 0 2 0 0 2 1 0 1 0 2 1 0 0 2 0 0 11 0 1106.6336 P13639 P13639 416 426 EEF2 Elongation factor 2 yes yes 2 1.3763E-05 174.86 By MS/MS By matching 4.5 1.89 1 2 1 1 1 5 1 46796000 46742000 53988 14859 576 15765 37714;37715;37716;37717;37718;37719 26650;26651;26652;26653;26654 26653 5 1097000 112810 VFSIGPVFR PQLYKQMCICADFEKVFSIGPVFRAEDSNT CADFEKVFSIGPVFRAEDSNTHRHLTEFVG K V F F R A 0 1 0 0 0 0 0 1 0 1 0 0 0 2 1 1 0 0 0 2 0 0 9 0 1020.5757 P14868 P14868 265 273 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 2 0.032712 89.55 By MS/MS 1 0 1 1 78489 78489 0 14860 594 15766 37720 26655 26655 1 3834.8 0 VFSLSSEFK NQLLKPTLSEIELFRVFSLSSEFKNITVRE EIELFRVFSLSSEFKNITVREEEKLELQKL R V F F K N 0 0 0 0 0 0 1 0 0 0 1 1 0 2 0 3 0 0 0 1 0 0 9 0 1042.5335 O75643 O75643 1017 1025 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0002019 163.99 By MS/MS 2 0.816 1 1 1 3 956790 956790 0 14861 322 15767 37721;37722;37723 26656;26657 26656 2 41624 0 VFSSTLQNWQTTR LAQVSPELLLASVRRVFSSTLQNWQTTRFM RRVFSSTLQNWQTTRFMEVEVAIRLLYMLA R V F T R F 0 1 1 0 0 2 0 0 0 0 1 0 0 1 0 2 3 1 0 1 0 0 13 0 1566.7791 O43592 O43592 430 442 XPOT Exportin-T yes yes 2 3.9131E-12 209.8 By MS/MS 4.5 0.5 1 1 2 695640 695640 0 14862 208 15768 37724;37725 26658 26658 1 22728 0 VFTTVGSAEK VGQAAIAIALSLGCRVFTTVGSAEKRAYLQ SLGCRVFTTVGSAEKRAYLQARFPQLDSTS R V F E K R 1 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 2 0 0 2 0 0 10 0 1037.5393 P49327 P49327 1695 1704 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00061553 140.45 By MS/MS 3 1.41 1 1 1 1 1 5 21624000 21624000 0 14863 915 15769 37726;37727;37728;37729;37730 26659;26660;26661;26662 26660 4 882300 0 VFTTVGSAEKR VGQAAIAIALSLGCRVFTTVGSAEKRAYLQ LGCRVFTTVGSAEKRAYLQARFPQLDSTSF R V F K R A 1 1 0 0 0 0 1 1 0 0 0 1 0 1 0 1 2 0 0 2 0 0 11 1 1193.6404 P49327 P49327 1695 1705 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 2.6185E-06 183.67 By MS/MS By matching 2.14 0.639 1 4 2 5 2 9393800 9350700 43051 14864 915 15770 37731;37732;37733;37734;37735;37736;37737 26663;26664;26665 26664 3 393240 39231 VFVEYIQPK LDILLYFTRQKDMAKVFVEYIQPKDPTNGQ QKDMAKVFVEYIQPKDPTNGQMYQKTLLGV K V F P K D 0 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 0 1 2 0 0 9 0 1121.6121 Q14139 Q14139 309 317 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.00084371 145.63 By MS/MS 3.5 0.5 1 1 2 2529200 2529200 0 14865 1408 15771 37738;37739 26666 26666 1 67874 0 VFVGGLSPDTSEEQIK PKRAKALKGKEPPKKVFVGGLSPDTSEEQI FVGGLSPDTSEEQIKEYFGAFGEIENIELP K V F I K E 0 0 0 1 0 1 2 2 0 1 1 1 0 1 1 2 1 0 0 2 0 0 16 0 1704.857 O14979 O14979 235 250 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 2 1.8513E-14 196.02 By MS/MS 8 0.816 1 1 1 3 4961000 4961000 0 14866 141 15772 37740;37741;37742 26667;26668 26667 2 203100 0 VGAAEIISR NYRQLVDTTVELANKVGAAEIISRIVDDLK VELANKVGAAEIISRIVDDLKDEAEQYRKM K V G S R I 2 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 0 1 0 0 9 0 914.51853 O75533 O75533 844 852 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00046591 154.12 By MS/MS 3 0 1 1 2432700 2432700 0 14867 315 15773 37743 26669 26669 1 63506 0 VGAAGPAPGTGSGPLR RVLLPVWEAEGLGLRVGAAGPAPGTGSGPL GAAGPAPGTGSGPLRAARDSIELRRGACVR R V G L R A 3 1 0 0 0 0 0 5 0 0 1 0 0 0 3 1 1 0 0 1 0 0 16 0 1363.7208 Q5T447 Q5T447 75 90 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 2 5.5986E-06 147.3 By MS/MS 4.5 0.5 1 1 2 2469100 2469100 0 14868 1626 15774 37744;37745 26670 26670 1 71743 0 VGAEDADGIDMAYR EAIQKGTGARPYTGKVGAEDADGIDMAYRV KVGAEDADGIDMAYRVLADHARTITVALAD K V G Y R V 3 1 0 3 0 0 1 2 0 1 0 0 1 0 0 0 0 0 1 1 0 0 14 0 1481.6457 P49588 P49588 283 296 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 1.6932E-25 234.65 By MS/MS 4.5 0.5 1 1 2 3347500 3347500 0 14869 921 15775 37746;37747 26671 26671 1 105380 0 VGAGDSQLK CESAEVSIVDCILARVGAGDSQLKGVSTFM DCILARVGAGDSQLKGVSTFMAEMLETASI R V G L K G 1 0 0 1 0 1 0 2 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 873.4556 P43246 P43246 712 720 MSH2 DNA mismatch repair protein Msh2 yes yes 2 0.040478 85.161 By MS/MS 4 0 1 1 1078200 1078200 0 14870 862 15776 37748 26672 26672 1 29433 0 VGCGSPR GTTVLNCSHDFLSGKVGCGSPRIHFGGLIE SHDFLSGKVGCGSPRIHFGGLIEEDDVILL K V G P R I 0 1 0 0 1 0 0 2 0 0 0 0 0 0 1 1 0 0 0 1 0 0 7 0 731.33846 Q6UB35 Q6UB35 300 306 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.043839 105.39 By MS/MS 4 0 1 1 56755 0 56755 14871 1726 15777 37749 26673 26673 1 0 118590 VGCNPNEDVAIFAVDSLR QWSRIWEVIGDHFNKVGCNPNEDVAIFAVD NPNEDVAIFAVDSLRQLSMKFLEKGELANF K V G L R Q 2 1 2 2 1 0 1 1 0 1 1 0 0 1 1 1 0 0 0 3 0 0 18 0 1974.9469 Q9Y6D6;Q9Y6D5 Q9Y6D6 1198 1215 ARFGEF1;ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 no no 2 8.0931E-19 205.3 By MS/MS 2.5 0.5 1 1 2 550420 550420 0 14872 3003;3002 15778 37750;37751 26674;26675;26676 26674 3 23245 0 VGCVWQTVR CLEMLLRIVLENRDRVGCVWQTVRDHLYHL LENRDRVGCVWQTVRDHLYHLCVQAQDFCF R V G V R D 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 0 3 0 0 9 0 1103.5546 Q92538 Q92538 1171 1179 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0014448 135.79 By MS/MS 2.5 0.5 1 1 2 387370 387370 0 14873 2055 15779 37752;37753 26677 26677 1 16219 0 VGDAIPAVEVFEGEPGNK VRSFSRAAAAMAPIKVGDAIPAVEVFEGEP AIPAVEVFEGEPGNKVNLAELFKGKKGVLF K V G N K V 2 0 1 1 0 0 3 3 0 1 0 1 0 1 2 0 0 0 0 3 0 0 18 0 1826.905 P30044 P30044 58 75 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.0086914 84.892 By MS/MS 10 0 1 1 289910 289910 0 14874 730 15780 37754 26678 26678 1 308150 0 VGDDPAVWQLK ALGDLISATKAAAGKVGDDPAVWQLKNSAK AAGKVGDDPAVWQLKNSAKVMVTNVTSLLK K V G L K N 1 0 0 2 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 11 0 1226.6295 Q9Y490 Q9Y490 2105 2115 TLN1 Talin-1 yes yes 2 0.0017398 123.75 By MS/MS 2.5 0.5 1 1 2 1314700 1314700 0 14875 2947 15781 37755;37756 26679;26680 26679 2 54506 0 VGDDVEFEVSSDR FFHCSQYNGNLQDLKVGDDVEFEVSSDRRT LKVGDDVEFEVSSDRRTGKPIAVKLVKIKQ K V G D R R 0 1 0 3 0 0 2 1 0 0 0 0 0 1 0 2 0 0 0 3 0 0 13 0 1452.6369 O75534 O75534 65 77 CSDE1 Cold shock domain-containing protein E1 yes yes 2 3.4413E-12 210.35 By MS/MS 4.5 0.5 1 1 2 1581900 1581900 0 14876 316 15782 37757;37758 26681 26681 1 59298 0 VGDDVEFEVSSDRR FFHCSQYNGNLQDLKVGDDVEFEVSSDRRT KVGDDVEFEVSSDRRTGKPIAVKLVKIKQE K V G R R T 0 2 0 3 0 0 2 1 0 0 0 0 0 1 0 2 0 0 0 3 0 0 14 1 1608.738 O75534 O75534 65 78 CSDE1 Cold shock domain-containing protein E1 yes yes 2 0.00014657 155.11 By MS/MS 4.5 0.5 1 1 2 1688900 1688900 0 14877 316 15783 37759;37760 26682 26682 1 67034 0 VGDKVLLPEYGGTK GSKGKGGEIQPVSVKVGDKVLLPEYGGTKV KVGDKVLLPEYGGTKVVLDDKDYFLFRDGD K V G T K V 0 0 0 1 0 0 1 3 0 0 2 2 0 0 1 0 1 0 1 2 0 0 14 1 1474.8031 P61604 P61604 67 80 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 0.048358 100.02 By MS/MS 10 0 1 1 326150 326150 0 14878 1102 15784 37761 26683 26683 1 346670 0 VGDLFQK DGLFPRVQQWSHQQRVGDLFQKLASQLGVY QQWSHQQRVGDLFQKLASQLGVYRAFVDNY R V G Q K L 0 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 805.4334 P11274 P11274 577 583 BCR Breakpoint cluster region protein yes yes 2 0.042356 106.42 By MS/MS By matching 2.2 1.17 2 1 1 1 4 1 1222300 1178500 43793 14879 551 15785 37762;37763;37764;37765;37766 26684 26684 1 46254 43793 VGDPQELNGITR PESFEYIEAHGTGTKVGDPQELNGITRALC GTKVGDPQELNGITRALCATRQEPLLIGST K V G T R A 0 1 1 1 0 1 1 2 0 1 1 0 0 0 1 0 1 0 0 1 0 0 12 0 1297.6626 P49327 P49327 299 310 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.3856E-06 176.18 By MS/MS 3 1.41 1 1 1 1 1 5 15709000 15709000 0 14880 915 15786 37767;37768;37769;37770;37771 26685;26686;26687;26688;26689 26685 5 619560 0 VGDQILLAIK APRCIHVYKKNGVGKVGDQILLAIKGQKKK NGVGKVGDQILLAIKGQKKKALIVGHCMPG K V G I K G 1 0 0 1 0 1 0 1 0 2 2 1 0 0 0 0 0 0 0 1 0 0 10 0 1068.6543 Q6P1L8 Q6P1L8 69 78 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 0.0004387 170.5 By MS/MS 10 0 1 1 1817500 1817500 0 14881 1700 15787 37772 26690 26690 1 1931800 0 VGDQVWLFIDEPR GGYVLHIGTIYGDLKVGDQVWLFIDEPRRR LKVGDQVWLFIDEPRRRPIMSNHTATHILN K V G P R R 0 1 0 2 0 1 1 1 0 1 1 0 0 1 1 0 0 1 0 2 0 0 13 0 1572.7936 P49588 P49588 585 597 AARS Alanine--tRNA ligase, cytoplasmic yes yes 2 0.00027846 144.47 By MS/MS 4.5 0.5 1 1 2 174290 174290 0 14882 921 15788 37773;37774 26691 26691 1 5123.4 0 VGDVQGQESESQLPTK DDYTPVNIDGAHAQRVGDVQGQESESQLPT GDVQGQESESQLPTKIILTGQKTKTLHKEE R V G T K I 0 0 0 1 0 3 2 2 0 0 1 1 0 0 1 2 1 0 0 2 0 0 16 0 1700.8217 Q96JH7 Q96JH7 676 691 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 3.1246E-93 344.54 By MS/MS 3 0.816 1 1 1 3 1913200 1913200 0 14883 2209 15789 37775;37776;37777 26692 26692 1 51175 0 VGDVVEFR FPEGGKMSQYLDSLKVGDVVEFRGPSGLLT QYLDSLKVGDVVEFRGPSGLLTYTGKGHFN K V G F R G 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 3 0 0 8 0 919.47633 Q9UHQ9 Q9UHQ9 140 147 CYB5R1 NADH-cytochrome b5 reductase 1 yes yes 2 0.014016 114.5 By MS/MS 8 0 1 1 1736000 1736000 0 14884 2781 15790 37778 26693 26693 1 114530 0 VGEATETALTCLVEK DSALDYNEAKGVYEKVGEATETALTCLVEK VGEATETALTCLVEKMNVFDTELKGLSKIE K V G E K M 2 0 0 0 1 0 3 1 0 0 2 1 0 0 0 0 3 0 0 2 0 0 15 0 1619.8076 P16615;Q93084 P16615 437 451 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 2 1.9996E-78 326.79 By MS/MS 3.89 1.79 1 1 2 2 1 1 1 9 42142000 42142000 0 14885 608 15791 37779;37780;37781;37782;37783;37784;37785;37786;37787 26694;26695;26696;26697;26698;26699;26700 26694 7 1287500 0 VGEFSGANK VKCMPTFQFFKKGQKVGEFSGANKEKLEAT FKKGQKVGEFSGANKEKLEATINELV____ K V G N K E 1 0 1 0 0 0 1 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 907.43995 P10599 P10599 86 94 TXN Thioredoxin yes yes 2 0.0017265 132.76 By MS/MS By matching 9.67 0.471 1 2 1 2 3137500 3069000 68549 14886 539 15792 37788;37789;37790 26701 26701 1 3262000 1391200 VGEFSGANKEK VKCMPTFQFFKKGQKVGEFSGANKEKLEAT KGQKVGEFSGANKEKLEATINELV______ K V G E K L 1 0 1 0 0 0 2 2 0 0 0 2 0 1 0 1 0 0 0 1 0 0 11 1 1164.5775 P10599 P10599 86 96 TXN Thioredoxin yes yes 2 0.00044033 167.93 By MS/MS By matching 9 0.816 1 1 1 1 2 503460 473940 29516 14887 539 15793 37791;37792;37793 26702 26702 1 503750 272690 VGEGPGVCWLAPEQTAGK PCRAAERLQVLLTYRVGEGPGVCWLAPEQT GPGVCWLAPEQTAGKKKPFVYTQGQAVLNR R V G G K K 2 0 0 0 1 1 2 4 0 0 1 1 0 0 2 0 1 1 0 2 0 0 18 0 1854.8934 Q9H4A4 Q9H4A4 144 161 RNPEP Aminopeptidase B yes yes 2 0.0015769 119.62 By MS/MS 5 0 1 1 900150 900150 0 14888 2497 15794 37794 26703 26703 1 37000 0 VGEIVVFR GDLLFLTNRVEDPIRVGEIVVFRIEGREIP RVEDPIRVGEIVVFRIEGREIPIVHRVLKI R V G F R I 0 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 3 0 0 8 0 917.53345 P67812 P67812 79 86 SEC11A Signal peptidase complex catalytic subunit SEC11A yes yes 2 0.0052659 136.11 By MS/MS 9 0 1 1 1659100 1659100 0 14889 1183 15795 37795 26704 26704 1 952200 0 VGEPKDVIR TENEASSFIPYLVVKVGEPKDVIRKDVRAI PYLVVKVGEPKDVIRKDVRAILNRMCLVYP K V G I R K 0 1 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 9 1 1011.5713 Q14008 Q14008 1298 1306 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.056377 87.258 By MS/MS 2 0 1 1 332280 332280 0 14890 1405 15796 37796 26705 26705 1 16516 0 VGEPVALSEEER PMAHPPNLGPPPPLRVGEPVALSEEERLKL PLRVGEPVALSEEERLKLAQQQAALLMQQE R V G E R L 1 1 0 0 0 0 4 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 12 0 1313.6463 Q13435 Q13435 135 146 SF3B2 Splicing factor 3B subunit 2 yes yes 2 1.1558E-05 174.4 By MS/MS By matching 3.33 0.471 2 1 2 1 5230300 5165000 65239 14891 1369 15797 37797;37798;37799 26706 26706 1 135300 93501 VGESNLTNGDEPTQCSR AFSSHLVPKLAEELRVGESNLTNGDEPTQC ESNLTNGDEPTQCSRHLCCLQALSAVSTHP R V G S R H 0 1 2 1 1 1 2 2 0 0 1 0 0 0 1 2 2 0 0 1 0 0 17 0 1862.8065 Q96T76 Q96T76 535 551 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 2 8.8022E-15 194.59 By MS/MS 4.5 0.5 1 1 2 901150 901150 0 14892 2261 15798 37800;37801 26707 26707 1 26147 0 VGEVCHITCKPEYAYGSAGSPPK GEVIKAWDIAIATMKVGEVCHITCKPEYAY CKPEYAYGSAGSPPKIPPNATLVFEVELFE K V G P K I 2 0 0 0 2 0 2 3 1 1 0 2 0 0 3 2 1 0 2 2 0 0 23 1 2506.1621 Q02790 Q02790 99 121 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 3 2.696E-06 111.45 By MS/MS 6 0 1 1 3931700 3931700 0 14893 1255 15799 37802 26708 26708 1 30660 0 VGEVIVTK LTLNLEDVQPHDLGKVGEVIVTKDDAMLLK QPHDLGKVGEVIVTKDDAMLLKGKGDKAQI K V G T K D 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 8 0 843.50657 P10809 P10809 345 352 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0075842 127.46 By MS/MS 6.5 1.12 1 1 1 1 4 44969000 44969000 0 14894 544 15800 37803;37804;37805;37806 26709 26709 1 419880 0 VGEVIVTKDDAMLLK LTLNLEDVQPHDLGKVGEVIVTKDDAMLLK VGEVIVTKDDAMLLKGKGDKAQIEKRIQEI K V G L K G 1 0 0 2 0 0 1 1 0 1 2 2 1 0 0 0 1 0 0 3 0 0 15 1 1629.9011 P10809 P10809 345 359 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 2.9541E-13 196.02 By MS/MS By matching 6.07 1.34 1 1 2 5 4 2 14 1 468870000 468780000 87553 14895 544 15801;15802 37807;37808;37809;37810;37811;37812;37813;37814;37815;37816;37817;37818;37819;37820;37821 26710;26711;26712;26713;26714;26715;26716 26715 329 7 4283500 268520 VGEVTYVELLMDAEGK FDVKWQSLKDLVKEKVGEVTYVELLMDAEG GEVTYVELLMDAEGKSRGCAVVEFKMEESM K V G G K S 1 0 0 1 0 0 3 2 0 0 2 1 1 0 0 0 1 0 1 3 0 0 16 0 1751.8652 P52272 P52272 95 110 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 3.5627E-10 177.83 By MS/MS 5 0 1 1 184960 184960 0 14896 982 15803 37822 26717 26717 747 1 7602.5 0 VGGEFFFDPQPADASR WVHNTCTLDCEVAVRVGGEFFFDPQPADAS GGEFFFDPQPADASRNLVLIAGGVGINPLL R V G S R N 2 1 0 2 0 1 1 2 0 0 0 0 0 3 2 1 0 0 0 1 0 0 16 0 1738.7951 Q96HP4 Q96HP4 155 170 OXNAD1 Oxidoreductase NAD-binding domain-containing protein 1 yes yes 2 0.0061264 101.38 By MS/MS 8.5 0.5 1 1 2 662020 662020 0 14897 2194 15804 37823;37824 26718 26718 1 59926 0 VGGGGVGGGLLENANPLIYQR ______________________________ GGGLLENANPLIYQRSGERPVTAGEEDEQV M V G Q R S 1 1 2 0 0 1 1 7 0 1 3 0 0 0 1 0 0 0 1 2 0 0 21 0 2040.0752 Q9Y3D0 Q9Y3D0 2 22 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 2 1.6734E-05 127.79 By MS/MS 10 0 1 1 141130 141130 0 14898 2929 15805 37825 26719 26719 1 150010 0 VGGHAAEYGAEALER LSAADKGNVKAAWGKVGGHAAEYGAEALER VGGHAAEYGAEALERMFLSFPTTKTYFPHF K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 2 0.0040225 107.97 By MS/MS 10 0 1 1 307200 307200 0 + 14899 34 15806 37826 26720 26720 1 326520 0 VGGIYTVLQTK ENAVLFEVAWEVANKVGGIYTVLQTKAKVT VANKVGGIYTVLQTKAKVTGDEWGDNYFLV K V G T K A 0 0 0 0 0 1 0 2 0 1 1 1 0 0 0 0 2 0 1 2 0 0 11 0 1177.6707 P13807 P13807 40 50 GYS1 Glycogen [starch] synthase, muscle yes yes 2 0.00020231 154.85 By MS/MS 4.5 0.5 1 1 2 1087500 1087500 0 14900 583 15807 37827;37828 26721 26721 1 42631 0 VGGLLAFAK LRGDHTRCKTVLTGKVGGLLAFAKRRNCCI TVLTGKVGGLLAFAKRRNCCIGCRTVLSHQ K V G A K R 2 0 0 0 0 0 0 2 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 874.52764 P28340 P28340 999 1007 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.0057032 114.19 By MS/MS 3 0 1 1 506340 506340 0 14901 719 15808 37829 26722 26722 1 13218 0 VGGNIEVLGFNAR LRNDKDKPLPPLLARVGGNIEVLGFNARQR ARVGGNIEVLGFNARQRKAFLNAIMRYGMP R V G A R Q 1 1 2 0 0 0 1 3 0 1 1 0 0 1 0 0 0 0 0 2 0 0 13 0 1344.715 Q14839;Q8TDI0 Q14839 1407 1419 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 2 0.00014107 152.64 By MS/MS 3 0.816 1 1 1 3 2005500 2005500 0 14902 1449 15809 37830;37831;37832 26723;26724 26723 2 72852 0 VGGSSVDLHR APSRQDVYGPQPQVRVGGSSVDLHRFHPEP QPQVRVGGSSVDLHRFHPEPYGLEDDQRSM R V G H R F 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1025.5254 O60716 O60716 265 274 CTNND1 Catenin delta-1 yes yes 2 0.0027233 114.89 By MS/MS 4 0 1 1 768730 768730 0 14903 260 15810 37833 26725 26725 1 20986 0 VGGTSDVEVNEK NERLAKLSDGVAVLKVGGTSDVEVNEKKDR VLKVGGTSDVEVNEKKDRVTDALNATRAAV K V G E K K 0 0 1 1 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 3 0 0 12 0 1232.5885 P10809 P10809 406 417 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 4.3369E-18 232.88 By MS/MS By MS/MS 5.75 2.62 1 1 1 2 2 2 1 1 1 9 3 250970000 249900000 1063500 14904 544 15811 37834;37835;37836;37837;37838;37839;37840;37841;37842;37843;37844;37845 26726;26727;26728;26729;26730;26731;26732;26733 26726 8 2493800 3281300 VGGTSDVEVNEKK NERLAKLSDGVAVLKVGGTSDVEVNEKKDR LKVGGTSDVEVNEKKDRVTDALNATRAAVE K V G K K D 0 0 1 1 0 0 2 2 0 0 0 2 0 0 0 1 1 0 0 3 0 0 13 1 1360.6834 P10809 P10809 406 418 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 3.368E-45 272.94 By MS/MS By matching 5.33 2.32 1 1 1 1 1 3 2 1 1 11 1 56567000 56535000 31871 14905 544 15812 37846;37847;37848;37849;37850;37851;37852;37853;37854;37855;37856;37857 26734;26735 26734 2 584250 97746 VGGTSDVEVNEKKDR NERLAKLSDGVAVLKVGGTSDVEVNEKKDR VGGTSDVEVNEKKDRVTDALNATRAAVEEG K V G D R V 0 1 1 2 0 0 2 2 0 0 0 2 0 0 0 1 1 0 0 3 0 0 15 2 1631.8115 P10809 P10809 406 420 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3;4 1.6764E-13 205.12 By MS/MS By MS/MS 6.06 2.17 1 1 1 2 5 3 3 2 16 2 466870000 466000000 866540 14906 544 15813 37858;37859;37860;37861;37862;37863;37864;37865;37866;37867;37868;37869;37870;37871;37872;37873;37874;37875 26736;26737;26738;26739;26740;26741;26742 26739 7 4746700 2657600 VGHFDPVTR GITYDRKDIEEHLQRVGHFDPVTRSPLTQE EEHLQRVGHFDPVTRSPLTQEQLIPNLAMK R V G T R S 0 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 2 0 0 9 0 1026.5247 Q9UNE7 Q9UNE7 264 272 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 2 0.030753 90.657 By MS/MS 8 0 1 1 1710500 1710500 0 14907 2838 15814 37876 26743 26743 1 112840 0 VGHSELVGEIIR TACDMAGAAMYELVRVGHSELVGEIIRLEG LVRVGHSELVGEIIRLEGDMATIQVYEETS R V G I R L 0 1 0 0 0 0 2 2 1 2 1 0 0 0 0 1 0 0 0 2 0 0 12 0 1307.7197 P38606 P38606 45 56 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 3 0.031112 72.29 By MS/MS 5.5 0.5 1 1 2 4195300 4195300 0 14908 819 15815 37877;37878 26744 26744 1 58095 0 VGIFQSFQK IQHLRLQGQMPALMRVGIFQSFQKSSRDIL MPALMRVGIFQSFQKSSRDILLCTDIASRG R V G Q K S 0 0 0 0 0 2 0 1 0 1 0 1 0 2 0 1 0 0 0 1 0 0 9 0 1052.5655 Q9NUL7 Q9NUL7 437 445 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 2 4.1253E-06 180.87 By MS/MS 6 0 1 1 4295800 4295800 0 14909 2638 15816 37879 26745 26745 1 33499 0 VGIGAFPTEQDNEIGELLQTR NVGEVYGVVKAYTTRVGIGAFPTEQDNEIG PTEQDNEIGELLQTRGREFGVTTGRKRRCG R V G T R G 1 1 1 1 0 2 3 3 0 2 2 0 0 1 1 0 2 0 0 1 0 0 21 0 2286.1492 P30520 P30520 304 324 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2;3 8.6578E-25 205.66 By MS/MS 6.33 0.471 2 1 3 2042800 2042800 0 14910 742 15817 37880;37881;37882 26746;26747 26746 2 16639 0 VGILDVDLCGPSIPR ISTELALALRHAGKKVGILDVDLCGPSIPR VGILDVDLCGPSIPRMLGAQGRAVHQCDRG K V G P R M 0 1 0 2 1 0 0 2 0 2 2 0 0 0 2 1 0 0 0 2 0 0 15 0 1609.8498 Q9Y5Y2 Q9Y5Y2 46 60 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes yes 2 0.0047944 105.17 By MS/MS 8 0 1 1 146850 146850 0 14911 2987 15818 37883 26748 26748 1 9687.9 0 VGILLDEASGVNK KFDLLVDANDVILERVGILLDEASGVNKNQ ERVGILLDEASGVNKNQQPVLPAGLQVPKT R V G N K N 1 0 1 1 0 0 1 2 0 1 2 1 0 0 0 1 0 0 0 2 0 0 13 0 1313.7191 Q01780 Q01780 124 136 EXOSC10 Exosome component 10 yes yes 2 9.6922E-05 155.26 By MS/MS 4.5 0.5 1 1 2 757350 757350 0 14912 1244 15819 37884;37885 26749 26749 1 22016 0 VGINYQPPTVVPGGDLAK KRSIQFVDWCPTGFKVGINYQPPTVVPGGD NYQPPTVVPGGDLAKVQRAVCMLSNTTAIA K V G A K V 1 0 1 1 0 1 0 3 0 1 1 1 0 0 3 0 1 0 1 3 0 0 18 0 1823.9781 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 P68363 353 370 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 2;3 7.0741E-11 168.76 By MS/MS By MS/MS 5.35 2.32 1 1 2 2 2 5 1 1 1 1 16 1 1623400000 1622600000 790820 14913 1185;1754;2314;1186 15820 37886;37887;37888;37889;37890;37891;37892;37893;37894;37895;37896;37897;37898;37899;37900;37901;37902 26750;26751;26752;26753;26754;26755;26756;26757;26758;26759;26760;26761;26762;26763;26764;26765;26766;26767;26768 26757 19 32567000 2425400 VGIPVTDENGNR ANCINIPLMRQRELKVGIPVTDENGNRLGE ELKVGIPVTDENGNRLGESANAAKQAITQV K V G N R L 0 1 2 1 0 0 1 2 0 1 0 0 0 0 1 0 1 0 0 2 0 0 12 0 1269.6313 Q9H9B4 Q9H9B4 203 214 SFXN1 Sideroflexin-1 yes yes 2 0.0095843 97.472 By MS/MS By matching 8.75 0.829 2 1 1 3 1 54433000 54348000 84703 14914 2533 15821 37903;37904;37905;37906 26769 26769 1 4049800 722620 VGKHELTGHK ILGDTLGVGTFGKVKVGKHELTGHKVAVKI FGKVKVGKHELTGHKVAVKILNRQKIRSLD K V G H K V 0 0 0 0 0 0 1 2 2 0 1 2 0 0 0 0 1 0 0 1 0 0 10 1 1104.604 Q13131 Q13131 43 52 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 2 0.039615 96.034 By MS/MS 6 0 1 1 0 0 0 14915 1337 15822 37907 26770 26770 1 0 0 VGLAALIIQDFK KTTKELKNPQETAERVGLAALIIQDFKGLL AERVGLAALIIQDFKGLLLSDYKFSWDRVF R V G F K G 2 0 0 1 0 1 0 1 0 2 2 1 0 1 0 0 0 0 0 1 0 0 12 0 1286.7598 Q5T160 Q5T160 427 438 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 2 5.6149E-05 164.66 By MS/MS 6 0 1 1 2371400 2371400 0 14916 1624 15823 37908 26771 26771 1 18492 0 VGLADLHPDVFATAPR VQAWVESLRGFEQERVGLADLHPDVFATAP GLADLHPDVFATAPRLDILHQVAMWQKNFK R V G P R L 3 1 0 2 0 0 0 1 1 0 2 0 0 1 2 0 1 0 0 2 0 0 16 0 1677.8839 Q9BYD3 Q9BYD3 77 92 MRPL4 39S ribosomal protein L4, mitochondrial yes yes 2;3 2.5895E-10 186.76 By MS/MS 8.33 0.471 2 1 3 2681900 2681900 0 14917 2414 15824 37909;37910;37911 26772;26773 26773 2 208860 0 VGLDATNCLR PMLSPFISSVVRNGKVGLDATNCLRITDLK VRNGKVGLDATNCLRITDLKSGCTSLTPGP K V G L R I 1 1 1 1 1 0 0 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1117.555 Q9NXR7 Q9NXR7 27 36 BRE BRCA1-A complex subunit BRE yes yes 2 1.4418E-06 177.3 By MS/MS 7 0 1 1 1712500 1712500 0 14918 2691 15825 37912 26774 26774 1 30603 0 VGLIAAR GKPSTIRRDAPAGRKVGLIAARRTGRLRGT RDAPAGRKVGLIAARRTGRLRGTKTVQEKE K V G A R R 2 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 698.44391 P62917 P62917 235 241 RPL8 60S ribosomal protein L8 yes yes 2 0.037342 109.88 By MS/MS 8.5 0.5 1 1 2 478730 478730 0 14919 1162 15826 37913;37914 26775 26775 1 65128 0 VGLKAPGIIPR AIDGKGPIGSKTRRRVGLKAPGIIPRISVR TRRRVGLKAPGIIPRISVREPMQTGIKAVD R V G P R I 1 1 0 0 0 0 0 2 0 2 1 1 0 0 2 0 0 0 0 1 0 0 11 1 1119.7128 P25705 P25705 172 182 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 0.0037467 118.33 By MS/MS By matching 6.6 0.8 3 1 1 4 1 28573000 28533000 40390 14920 687 15827 37915;37916;37917;37918;37919 26776;26777 26777 2 229550 123870 VGLLAGQPAVTVR TCQDWLTRIRLSIMRVGLLAGQPAVTVRHG MRVGLLAGQPAVTVRHGFDLLTEMKTTSLS R V G V R H 2 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 1 0 0 3 0 0 13 0 1279.7612 Q96Q15 Q96Q15 1037 1049 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.031156 78.655 By MS/MS 1 0 1 1 228430 228430 0 14921 2241 15828 37920 26778 26778 1 11161 0 VGLQANR GLTEAIVVNPFEVVKVGLQANRNTFAEQPS VNPFEVVKVGLQANRNTFAEQPSTVGYARQ K V G N R N 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 756.42424 Q9BQT8 Q9BQT8 135 141 SLC25A21 Mitochondrial 2-oxodicarboxylate carrier yes yes 2 0.023827 119.22 By MS/MS 8 0 1 1 1981300 1981300 0 14922 2319 15829 37921 26779 26779 1 130700 0 VGLQVVAVK VDGEALSTLVLNRLKVGLQVVAVKAPGFGD VLNRLKVGLQVVAVKAPGFGDNRKNQLKDM K V G V K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 9 0 911.5804 P10809 P10809 293 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 3.8679E-06 181.81 By MS/MS By MS/MS 5.25 1.85 1 1 2 2 1 1 6 2 262840000 262340000 496830 14923 544 15830 37922;37923;37924;37925;37926;37927;37928;37929 26780;26781;26782;26783;26784;26785;26786 26784 7 2424300 1521300 VGLQVVAVKAPGFGDNR VDGEALSTLVLNRLKVGLQVVAVKAPGFGD LQVVAVKAPGFGDNRKNQLKDMAIATGGAV K V G N R K 2 1 1 1 0 1 0 3 0 0 1 1 0 1 1 0 0 0 0 4 0 0 17 1 1725.9526 P10809 P10809 293 309 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.015749 95.822 By MS/MS 6 0 1 1 3811200 3811200 0 14924 544 15831 37930 26787 26787 0 29720 0 VGNALWR SAASLWGPYKDIWHKVGNALWRRQPEAVHL PYKDIWHKVGNALWRRQPEAVHLLDKILKK K V G W R R 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 7 0 814.44497 Q92621 Q92621 24 30 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.015839 137.83 By MS/MS 2.5 0.5 1 1 2 186590 186590 0 14925 2070 15832 37931;37932 26788 26788 1 8322.3 0 VGNHTAEGTGTNKK ERGLPRRREFVMQVKVGNHTAEGTGTNKKV KVGNHTAEGTGTNKKVAKRNAAENMLEILG K V G K K V 1 0 2 0 0 0 1 3 1 0 0 2 0 0 0 0 3 0 0 1 0 0 14 1 1412.7008 O95793 O95793 325 338 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes yes 2;3 0.016516 107.11 By MS/MS 6 0 2 2 635010 635010 0 14926 406 15833 37933;37934 26789;26790 26790 2 4951.9 0 VGNLGLATSFFNER SDIEEYVHRIGRTGRVGNLGLATSFFNERN RVGNLGLATSFFNERNINITKDLLDLLVEA R V G E R N 1 1 2 0 0 0 1 2 0 0 2 0 0 2 0 1 1 0 0 1 0 0 14 0 1523.7732 O00571 O00571 535 548 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2 2.727E-27 251.75 By MS/MS 5.25 1.56 1 2 2 1 1 1 8 10439000 10439000 0 14927 105 15834 37935;37936;37937;37938;37939;37940;37941;37942 26791;26792;26793;26794;26795 26793 5 236130 0 VGNNFHNLQEIR YKSDESYTPSKISVRVGNNFHNLQEIRQLE SVRVGNNFHNLQEIRQLELVEPSGWIHVPL R V G I R Q 0 1 3 0 0 1 1 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 12 0 1439.727 Q9UM13 Q9UM13 98 109 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 2;3 0.0053306 113.44 By MS/MS 9 0 2 2 1016000 1016000 0 14928 2832 15835 37943;37944 26796;26797 26796 2 583110 0 VGNQIFQSR KGLVKGKSDPYGIIRVGNQIFQSRVIKENL PYGIIRVGNQIFQSRVIKENLSPKWNEVYE R V G S R V 0 1 1 0 0 2 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1047.5461 A0FGR8 A0FGR8 420 428 ESYT2 Extended synaptotagmin-2 yes yes 2 0.0008397 145.72 By MS/MS 2.5 1.5 1 1 2 1780300 1780300 0 14929 6 15836 37945;37946 26798;26799 26798 2 55824 0 VGPGAGESPGTPPFR GLFGFAARTSVFLVRVGPGAGESPGTPPFR VGPGAGESPGTPPFRVIGELVGHTERVSGF R V G F R V 1 1 0 0 0 0 1 4 0 0 0 0 0 1 4 1 1 0 0 1 0 0 15 0 1424.7048 Q8TEQ6 Q8TEQ6 41 55 GEMIN5 Gem-associated protein 5 yes yes 2 1.6961E-05 141.1 By MS/MS 2.5 0.5 1 1 2 1848800 1848800 0 14930 2003 15837 37947;37948 26800 26800 1 51381 0 VGPMPWLGPQTDESIK RLEYCNPYRLVWQSKVGPMPWLGPQTDESI GPMPWLGPQTDESIKGLCERGRKNILLVPI K V G I K G 0 0 0 1 0 1 1 2 0 1 1 1 1 0 3 1 1 1 0 1 0 0 16 0 1753.8709 P22830 P22830 305 320 FECH Ferrochelatase, mitochondrial yes yes 2 0.0097439 121.56 By MS/MS 7 0 1 1 361930 361930 0 14931 663 15838 37949 26801 26801 1 6467.8 0 VGPVSHHR VALSRWVFKEEGVLRVGPVSHHRVGETAPP KEEGVLRVGPVSHHRVGETAPPNAYTVTDL R V G H R V 0 1 0 0 0 0 0 1 2 0 0 0 0 0 1 1 0 0 0 2 0 0 8 0 887.47258 P39656 P39656 308 315 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.0094173 120.62 By MS/MS By matching 6.33 0.471 2 1 2 1 13928000 13917000 10462 14932 825 15839 37950;37951;37952 26802 26802 1 114140 32085 VGQAMASTEEK ILVDNNTWNNTHISRVGQAMASTEEKAYEI HISRVGQAMASTEEKAYEIMRELDVSYVLV R V G E K A 2 0 0 0 0 1 2 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 11 0 1149.5336 P46977 P46977 555 565 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 2 1.072E-05 175.33 By MS/MS 1.5 0.5 2 2 4 2447300 2447300 0 14933 893 15840;15841 37953;37954;37955;37956 26803;26804;26805;26806 26805 633 4 120430 0 VGQASEIAR PAPQISDAELQEVVKVGQASEIARQTAEES LQEVVKVGQASEIARQTAEESGITNSASST K V G A R Q 2 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 9 0 929.49304 Q99459 Q99459 313 321 CDC5L Cell division cycle 5-like protein yes yes 2 0.0021123 128.6 By MS/MS 4 0.816 1 1 1 3 969610 969610 0 14934 2267 15842 37957;37958;37959 26807 26807 1 27397 0 VGQAVALR ARIRGETLGIIGLGRVGQAVALRAKAFGFN GIIGLGRVGQAVALRAKAFGFNVLFYDPYL R V G L R A 2 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 812.48684 Q13363 Q13363 185 192 CTBP1 C-terminal-binding protein 1 yes yes 2 0.0036598 145.04 By MS/MS 6.5 0.5 1 1 2 5375900 5375900 0 14935 1360 15843 37960;37961 26808 26808 1 84888 0 VGQAVDVVGQAGK VTFDEELRPLPVSVRVGQAVDVVGQAGKPK VRVGQAVDVVGQAGKPKTITGFQTHTTPVL R V G G K P 2 0 0 1 0 2 0 3 0 0 0 1 0 0 0 0 0 0 0 4 0 0 13 0 1226.6619 Q13200 Q13200 846 858 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.00053033 137.16 By MS/MS 4 0 1 1 547460 547460 0 14936 1347 15844 37962 26809 26809 1 14945 0 VGQAVDVVGQAGKPK VTFDEELRPLPVSVRVGQAVDVVGQAGKPK VGQAVDVVGQAGKPKTITGFQTHTTPVLLA R V G P K T 2 0 0 1 0 2 0 3 0 0 0 2 0 0 1 0 0 0 0 4 0 0 15 1 1451.8096 Q13200 Q13200 846 860 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2;3 1.1007E-27 234.79 By MS/MS By matching 5.88 2.65 1 1 1 3 2 2 2 1 2 2 16 1 22310000 22264000 46455 14937 1347 15845 37963;37964;37965;37966;37967;37968;37969;37970;37971;37972;37973;37974;37975;37976;37977;37978;37979 26810;26811;26812;26813;26814;26815 26811 6 1344700 97072 VGQDPALPADTLLLGDGDAGSLTSASQR VWQEVFQLPRAQRRRVGQDPALPADTLLLG LGDGDAGSLTSASQRFYRVLHAAASAGEHE R V G Q R F 4 1 0 4 0 2 0 4 0 0 5 0 0 0 2 3 2 0 0 1 0 0 28 0 2724.3566 Q8WVB6 Q8WVB6 604 631 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2;3 5.3809E-06 89.028 By MS/MS 4 0 2 2 1676600 1676600 0 14938 2027 15846 37980;37981 26816;26817 26816 2 45769 0 VGQDPVLR LVLERSLNRVHLLGRVGQDPVLRQVEGKNP RVHLLGRVGQDPVLRQVEGKNPVTIFSLAT R V G L R Q 0 1 0 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 8 0 882.49232 Q04837 Q04837 39 46 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 2 0.02209 104.06 By MS/MS By MS/MS 10 0 2 1 1 6639200 5233600 1405600 14939 1267 15847 37982;37983 26818;26819 26818 2 5562800 36053000 VGQEIEVRPGIVSK KGGVAGGSILKGVLKVGQEIEVRPGIVSKD KVGQEIEVRPGIVSKDSEGKLMCKPIFSKI K V G S K D 0 1 0 0 0 1 2 2 0 2 0 1 0 0 1 1 0 0 0 3 0 0 14 1 1509.8515 P41091 P41091 290 303 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 2;3 0.00092425 150.51 By MS/MS By matching 7.12 1.05 3 2 2 1 7 1 29981000 29887000 93671 14940 836 15848 37984;37985;37986;37987;37988;37989;37990;37991 26820;26821;26822 26822 3 393780 287280 VGQETFYDVYR FVLGGTMEWIMIKVRVGQETFYDVYRRKAS IKVRVGQETFYDVYRRKASERQYQRRLEDE R V G Y R R 0 1 0 1 0 1 1 1 0 0 0 0 0 1 0 0 1 0 2 2 0 0 11 0 1375.6408 Q8WVI0 Q8WVI0 45 55 SMIM4 Small integral membrane protein 4 yes yes 2 7.2058E-22 233.84 By MS/MS By matching 10 0 2 1 1 6922500 6887700 34821 14941 2030 15849 37992;37993 26823 26823 1 7320900 893140 VGQETFYDVYRR FVLGGTMEWIMIKVRVGQETFYDVYRRKAS KVRVGQETFYDVYRRKASERQYQRRLEDE_ R V G R R K 0 2 0 1 0 1 1 1 0 0 0 0 0 1 0 0 1 0 2 2 0 0 12 1 1531.7419 Q8WVI0 Q8WVI0 45 56 SMIM4 Small integral membrane protein 4 yes yes 3 0.0017142 117.14 By MS/MS 10 0 1 1 297420 297420 0 14942 2030 15850 37994 26824 26824 1 316120 0 VGQISFDLPR QSAYAQIVQFGMNEKVGQISFDLPRQGDMV GMNEKVGQISFDLPRQGDMVLEKPYSEATA K V G P R Q 0 1 0 1 0 1 0 1 0 1 1 0 0 1 1 1 0 0 0 1 0 0 10 0 1130.6084 Q9Y4W6 Q9Y4W6 670 679 AFG3L2 AFG3-like protein 2 yes yes 2 0.00040831 148.56 By MS/MS 7 1.41 1 1 1 1 1 5 8716600 8716600 0 14943 2960 15851 37995;37996;37997;37998;37999 26825;26826 26825 2 434290 0 VGQLSEGAIAAIMQK ______________________________ VGQLSEGAIAAIMQKGDTNIKPILQVINIR M V G Q K G 3 0 0 0 0 2 1 2 0 2 1 1 1 0 0 1 0 0 0 1 0 0 15 0 1514.8127 P27694 P27694 2 16 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 2.2719E-10 190.35 By MS/MS 5.5 0.5 1 1 2 1960300 1960300 0 14944 708 15852 38000;38001 26827 26827 478 1 45636 0 VGQNLPR SDVLPVLSMKHTKDRVGQNLPRCGIECKSY SMKHTKDRVGQNLPRCGIECKSYQEGLARL R V G P R C 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 7 0 782.43989 Q9Y312 Q9Y312 174 180 AAR2 Protein AAR2 homolog yes yes 2 0.023827 119.22 By MS/MS 6.5 0.5 1 1 2 4278600 4278600 0 14945 2910 15853 38002;38003 26828 26828 1 65804 0 VGQSEIR TAAHAYIMMFVHTCRVGQSEIRSISVNQWG MMFVHTCRVGQSEIRSISVNQWGSQLGLSV R V G I R S 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 7 0 787.41882 Q7Z6Z7 Q7Z6Z7 912 918 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.017377 133.6 By MS/MS By matching 1.75 0.829 2 1 1 3 1 901180 889420 11763 14946 1803 15854 38004;38005;38006;38007 26829;26830 26829 2 37080 11763 VGRRPDQQLQGEGK ETQPPVALKKEGIRRVGRRPDQQLQGEGKI RVGRRPDQQLQGEGKIIDRRPERRPPRERR R V G G K I 0 2 0 1 0 3 1 3 0 0 1 1 0 0 1 0 0 0 0 1 0 0 14 2 1566.8227 Q8NC51 Q8NC51 109 122 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.010577 130.01 By MS/MS 6 0 1 1 1179700 1179700 0 14947 1949 15855 38008 26831 26831 1 9199.4 0 VGSAAQTR KGIRPAINVGLSVSRVGSAAQTRAMKQVAG VGLSVSRVGSAAQTRAMKQVAGTMKLELAQ R V G T R A 2 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 8 0 788.41407 P25705 P25705 417 424 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.009351 120.87 By MS/MS By matching 7.2 1.17 2 1 1 1 4 1 38381000 38245000 136320 14948 687 15856 38009;38010;38011;38012;38013 26832;26833;26834;26835 26832 4 382920 418090 VGSEIER GMERMGAGLGHGMDRVGSEIERMGLVMDRM GLGHGMDRVGSEIERMGLVMDRMGSVERMG R V G E R M 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 7 0 788.40283 P52272 P52272 430 436 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 2 0.0085143 158.36 By MS/MS 5 0.816 1 1 1 3 3258500 3258500 0 14949 982 15857 38014;38015;38016 26836 26836 1 111940 0 VGSLVNAR HTEFLDEKIQPILDKVGSLVNARLEFSRGL IQPILDKVGSLVNARLEFSRGLMMLVLEKL K V G A R L 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 814.4661 Q6NUQ1 Q6NUQ1 362 369 RINT1 RAD50-interacting protein 1 yes yes 2 0.008595 123.69 By MS/MS 4.5 0.5 1 1 2 9448800 9448800 0 14950 1692 15858 38017;38018 26837 26837 1 267860 0 VGSPATVTFQQNK SGSVTTGTKMVLTTKVGSPATVTFQQNKNF TKVGSPATVTFQQNKNFHQTFATWVKQGQS K V G N K N 1 0 1 0 0 2 0 1 0 0 0 1 0 1 1 1 2 0 0 2 0 0 13 0 1375.7096 Q12830 Q12830 2096 2108 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 2 0.0082966 97.597 By MS/MS 1.5 0.5 1 1 2 344990 344990 0 14951 1309 15859 38019;38020 26838 26838 1 17037 0 VGSRVEVIGK SGSRMSAEASARPLRVGSRVEVIGKGHRGT ARPLRVGSRVEVIGKGHRGTVAYVGATLFA R V G G K G 0 1 0 0 0 0 1 2 0 1 0 1 0 0 0 1 0 0 0 3 0 0 10 1 1042.6135 Q14203 Q14203 29 38 DCTN1 Dynactin subunit 1 yes yes 3 0.044562 75.387 By MS/MS 3 0 1 1 273170 273170 0 14952 1420 15860 38021 26839 26839 1 7131 0 VGSTAVQVTSAER NALKLAHKDTKVSIKVGSTAVQVTSAERTK IKVGSTAVQVTSAERTKVLGQSVFLNDIYY K V G E R T 2 1 0 0 0 1 1 1 0 0 0 0 0 0 0 2 2 0 0 3 0 0 13 0 1303.6732 P21359 P21359 1757 1769 NF1 Neurofibromin;Neurofibromin truncated yes yes 2 8.3928E-06 144.28 By MS/MS 2 0 1 1 0 0 0 14953 649 15861 38022 26840 26840 1 0 0 VGSTSENITQK ARDFLDEYIFLAVGRVGSTSENITQKVVWV AVGRVGSTSENITQKVVWVEESDKRSFLLD R V G Q K V 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 2 2 0 0 1 0 0 11 0 1162.583 O00571;O15523 O00571 408 418 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 6.6179E-16 215.72 By MS/MS By MS/MS 4.86 2.36 1 1 2 1 1 1 6 1 50784000 50437000 347820 14954 105 15862 38023;38024;38025;38026;38027;38028;38029 26841;26842;26843;26844;26845;26846;26847 26844 7 1979300 1029200 VGSVEEFQGQER LDRELRGLDDIKDLKVGSVEEFQGQERSVI DLKVGSVEEFQGQERSVILISTVRSSQSFV K V G E R S 0 1 0 0 0 2 3 2 0 0 0 0 0 1 0 1 0 0 0 2 0 0 12 0 1363.6368 Q9HCE1 Q9HCE1 862 873 MOV10 Putative helicase MOV-10 yes yes 2 4.2728E-07 182.92 By MS/MS 4 0 1 1 464350 464350 0 14955 2560 15863 38030 26848 26848 1 12676 0 VGSVLQEGCGK LSMQKSMQNHAAVFRVGSVLQEGCGKISKL AVFRVGSVLQEGCGKISKLYGDLKHLKTFD R V G G K I 0 0 0 0 1 1 1 3 0 0 1 1 0 0 0 1 0 0 0 2 0 0 11 0 1132.5547 P31040 P31040 528 538 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 5.8703E-07 201.84 By MS/MS 4 2.16 1 1 1 3 7626800 7626800 0 14956 749 15864 38031;38032;38033 26849;26850;26851 26850 3 189230 0 VGTAQLALVAR LGAHALLANGSVMSRVGTAQLALVARAHNV VMSRVGTAQLALVARAHNVPVLVCCETYKF R V G A R A 3 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 2 0 0 11 0 1097.6557 Q9UI10 Q9UI10 418 428 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 2 6.9557E-17 231.38 By MS/MS 6 0 1 1 3755800 3755800 0 14957 2785 15865 38034 26852 26852 1 29288 0 VGTASVLQPVK PPPSQQGSPREGERRVGTASVLQPVKKRKV GERRVGTASVLQPVKKRKVDMPITVSYAIS R V G V K K 1 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 1 0 0 3 0 0 11 0 1097.6445 Q2TAL8 Q2TAL8 236 246 QRICH1 Glutamine-rich protein 1 yes yes 2 0.0017952 148.94 By MS/MS 4 0 1 1 903820 903820 0 14958 1562 15866 38035 26853 26853 1 24673 0 VGTDLLEEEITK GIRKLQIQCVVEDDKVGTDLLEEEITKFEE DDKVGTDLLEEEITKFEEHVQSVDIAAFNK K V G T K F 0 0 0 1 0 0 3 1 0 1 2 1 0 0 0 0 2 0 0 1 0 0 12 0 1345.6977 P29692 P29692 254 265 EEF1D Elongation factor 1-delta yes yes 2 8.3305E-09 186.87 By MS/MS 7 0 1 1 0 0 0 14959 726 15867 38036 26854 26854 1 0 0 VGTECGNQK TWGGQNIGRSPFEVKVGTECGNQKVRAWGP SPFEVKVGTECGNQKVRAWGPGLEGGVVGK K V G Q K V 0 0 1 0 1 1 1 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 9 0 991.43929 P21333 P21333 570 578 FLNA Filamin-A yes yes 2 1.8213E-08 209.87 By MS/MS 1.5 0.5 1 1 2 408010 408010 0 14960 648 15868 38037;38038 26855 26855 1 20272 0 VGTEGLVDSFSQGLER VSGTQVLLTLLETRRVGTEGLVDSFSQGLE GTEGLVDSFSQGLERSYAVSSSVLHGIEPR R V G E R S 0 1 0 1 0 1 2 3 0 0 2 0 0 1 0 2 1 0 0 2 0 0 16 0 1692.8319 O75170 O75170 281 296 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 2 0.00044293 124.12 By MS/MS 4 0 1 1 264710 264710 0 14961 288 15869 38039 26856 26856 1 7226.3 0 VGTFFSEVKPAGPTVEQQGEMAR KVSGHVITDIVEGKKVGTFFSEVKPAGPTV KPAGPTVEQQGEMARSGGRMLATLEPEQRA K V G A R S 2 1 0 0 0 2 3 3 0 0 0 1 1 2 2 1 2 0 0 3 0 0 23 1 2464.2057 P54886 P54886 349 371 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3 7.9932E-08 125.04 By MS/MS 5.14 1.25 1 1 2 2 1 7 16966000 16966000 0 14962 1019 15870;15871 38040;38041;38042;38043;38044;38045;38046 26857;26858 26857 790 2 538590 0 VGTGEPCCDWVGDEGAGHFVK AWPHIKTIFQGIAAKVGTGEPCCDWVGDEG CCDWVGDEGAGHFVKMVHNGIEYGDMQLIC K V G V K M 1 0 0 2 2 0 2 5 1 0 0 1 0 1 1 0 1 1 0 3 0 0 21 0 2275.9627 P52209 P52209 164 184 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 3 0.003603 75.743 By MS/MS 6.5 0.5 1 1 2 6506900 6506900 0 14963 981 15872 38047;38048 26859 26859 1 63178 0 VGTLVGEDK LRGYLRVFFRTNDAKVGTLVGEDKYGNKYY RTNDAKVGTLVGEDKYGNKYYEDNKQFFGR K V G D K Y 0 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 1 0 0 2 0 0 9 0 916.48656 Q9UI09 Q9UI09 35 43 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes yes 2 0.0028304 120.87 By MS/MS 10 0 1 1 688770 688770 0 14964 2784 15873 38049 26860 26860 1 732090 0 VGTVIGSNK DDKENRYWIFRSWGRVGTVIGSNKLEQMPS FRSWGRVGTVIGSNKLEQMPSKEDAIEHFM R V G N K L 0 0 1 0 0 0 0 2 0 1 0 1 0 0 0 1 1 0 0 2 0 0 9 0 873.49198 P09874 P09874 592 600 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0089921 107.01 By MS/MS 4.5 0.5 1 1 2 3121300 3121300 0 14965 521 15874 38050;38051 26861 26861 1 87097 0 VGTVLGQR LQLCPVLGDHMYSARVGTVLGQRFLLPAEN DHMYSARVGTVLGQRFLLPAENNKPQRQVL R V G Q R F 0 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 2 0 0 8 0 828.48175 Q6P087 Q6P087 268 275 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes yes 2 0.0033279 147.52 By MS/MS 8 0 1 1 976350 976350 0 14966 1697 15875 38052 26862 26862 1 64410 0 VGTYQLAIVAK VGADRVVANGDTANKVGTYQLAIVAKHHGI TANKVGTYQLAIVAKHHGIPFYVAAPSSSC K V G A K H 2 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 2 0 0 11 0 1161.6758 Q9BV20 Q9BV20 260 270 MRI1 Methylthioribose-1-phosphate isomerase yes yes 2 8.7972E-07 180.09 By MS/MS 7 0 1 1 1508100 1508100 0 14967 2369 15876 38053 26863 26863 1 26949 0 VGVADEGRTDTAYR NAIQQGCRAPPYLGRVGVADEGRTDTAYRV RVGVADEGRTDTAYRVVADHIRTLSVCISD R V G Y R V 2 2 0 2 0 0 1 2 0 0 0 0 0 0 0 0 2 0 1 2 0 0 14 1 1508.7219 Q5JTZ9 Q5JTZ9 309 322 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 2 0.0042793 131.42 By MS/MS 4.5 0.5 1 1 2 1032300 1032300 0 14968 1611 15877 38054;38055 26864 26864 1 31451 0 VGVASSEELAR ASTSRSLALMYESEKVGVASSEELARQRGV ESEKVGVASSEELARQRGVLERTEKMVDKM K V G A R Q 2 1 0 0 0 0 2 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1116.5775 O95721 O95721 73 83 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.00020231 154.85 By MS/MS 9 0.816 1 1 1 3 1050200 1050200 0 14969 403 15878 38056;38057;38058 26865 26865 1 370060 0 VGVDYEGGGCR HHDASTFTINIALNRVGVDYEGGGCRFLRY ALNRVGVDYEGGGCRFLRYNCSIRAPRKGW R V G C R F 0 1 0 1 1 0 1 4 0 0 0 0 0 0 0 0 0 0 1 2 0 0 11 0 1167.4979 Q02809 Q02809 671 681 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 2 0.00038541 147.4 By MS/MS 5 0 1 1 2043700 2043700 0 14970 1256 15879 38059 26866 26866 1 84004 0 VGVESTLER VEELNAQGLLHVFVRVGVESTLERSQITRD LHVFVRVGVESTLERSQITRDHMGQLLYQL R V G E R S 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 1 1 0 0 2 0 0 9 0 988.51892 O43432 O43432 1261 1269 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.0020363 129.42 By MS/MS 3 0.816 1 1 1 3 2407700 2407700 0 14971 200 15880 38060;38061;38062 26867 26867 1 98662 0 VGVKPVGSDPDFQPELSGAGSR ______________________________ SDPDFQPELSGAGSRLAVVKFTMRGCGPCL M V G S R L 1 1 0 2 0 1 1 4 0 0 1 1 0 1 3 3 0 0 0 3 0 0 22 1 2198.0968 O43396 O43396 2 23 TXNL1 Thioredoxin-like protein 1 yes yes 3 0.0027425 72.864 By MS/MS 8 0 1 1 1865400 1865400 0 14972 197 15881 38063 26868 26868 1 123060 0 VGVLTVSDSCFR ATEGMILTNHDHQIRVGVLTVSDSCFRNLA QIRVGVLTVSDSCFRNLAEDRSGINLKDLV R V G F R N 0 1 0 1 1 0 0 1 0 0 1 0 0 1 0 2 1 0 0 3 0 0 12 0 1338.6602 Q9NQX3 Q9NQX3 17 28 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 2 0.0072801 112.71 By MS/MS 4 0 1 1 1178800 1178800 0 14973 2594 15882 38064 26869 26869 1 32181 0 VGVNGFGR ______________________________ ______________________________ K V G G R I 0 1 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 804.42424 P04406 P04406 6 13 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.0019001 158.38 By MS/MS By matching 7.75 0.829 2 1 1 3 1 12521000 12502000 19135 14974 452 15883 38065;38066;38067;38068 26870 26870 1 312650 78551 VGVPTVDLDAQGR KYSNMEQSLFTRFVRVGVPTVDLDAQGRAR VRVGVPTVDLDAQGRARASLCNLYNWRYKN R V G G R A 1 1 0 2 0 1 0 2 0 0 1 0 0 0 1 0 1 0 0 3 0 0 13 0 1325.6939 O60306 O60306 1126 1138 AQR Intron-binding protein aquarius yes yes 2 0.0046382 105.4 By MS/MS 3.5 0.5 1 1 2 1017000 1017000 0 14975 243 15884 38069;38070 26871 26871 1 26757 0 VHAELADVLTEAVVDSILAIK RETLIDVARTSLRTKVHAELADVLTEAVVD DVLTEAVVDSILAIKKQDEPIDLFMIEIME K V H I K K 4 0 0 2 0 0 2 0 1 2 3 1 0 0 0 1 1 0 0 4 0 0 21 0 2205.2256 P40227 P40227 160 180 CCT6A T-complex protein 1 subunit zeta yes yes 3 0.048957 49.188 By MS/MS 6 0 1 1 54737 54737 0 14976 828 15885 38071 26872 26872 1 426.84 0 VHAIPLR QDGKLIIWDSYTTNKVHAIPLRSSWVMTCA WDSYTTNKVHAIPLRSSWVMTCAYAPSGNF K V H L R S 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 7 0 804.49701 P62873;P16520;P62879 P62879 90 96 GNB1;GNB3;GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 no no 2 0.043799 105.42 By MS/MS 8 0 1 1 1528600 1528600 0 14977 1156;1154 15886 38072 26873 26873 1 100840 0 VHDPVTAKPK MIKEGAAVIDVGINRVHDPVTAKPKLVGDV VGINRVHDPVTAKPKLVGDVDFEGVRQKAG R V H P K L 1 0 0 1 0 0 0 0 1 0 0 2 0 0 2 0 1 0 0 2 0 0 10 1 1090.6135 P13995 P13995 279 288 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 3 0.0078456 94.309 By MS/MS 7.5 0.5 1 1 2 1140400 1140400 0 14978 585 15887 38073;38074 26874 26874 1 56526 0 VHDYKEGTPEEK LGNPSWTVGCSVDVRVHDYKEGTPEEKTYY DVRVHDYKEGTPEEKTYYIELWDVGGSVGS R V H E K T 0 0 0 1 0 0 3 1 1 0 0 2 0 0 1 0 1 0 1 1 0 0 12 1 1430.6678 Q5HYI8 Q5HYI8 47 58 RABL3 Rab-like protein 3 yes yes 2;3 4.6424E-06 176.95 By MS/MS 8.5 0.5 2 2 4 2700700 2700700 0 14979 1601 15888 38075;38076;38077;38078 26875;26876 26876 2 297730 0 VHELQGNAPSDPDAVSAEEALK HVKKTTPELEIVLQKVHELQGNAPSDPDAV APSDPDAVSAEEALKYLLHLVDVNELYDHS K V H L K Y 4 0 1 2 0 1 3 1 1 0 2 1 0 0 2 2 0 0 0 2 0 0 22 0 2276.0921 O95163 O95163 858 879 IKBKAP Elongator complex protein 1 yes yes 3 0.0014025 79.172 By MS/MS 3.5 0.5 1 1 2 966150 966150 0 14980 368 15889 38079;38080 26877 26877 1 25366 0 VHGPGIQSGTTNKPNK FQVPVTEGCDPSRVRVHGPGIQSGTTNKPN HGPGIQSGTTNKPNKFTVETRGAGTGGLGL R V H N K F 0 0 2 0 0 1 0 3 1 1 0 2 0 0 2 1 2 0 0 1 0 0 16 1 1633.8536 P21333 P21333 1360 1375 FLNA Filamin-A yes yes 3;4 0.0060823 86.214 By MS/MS 2 0.707 1 2 1 4 802870 802870 0 14981 648 15890 38081;38082;38083;38084 26878;26879 26878 2 36835 0 VHGQATGEK WIGDCVGCHLDFTLKVHGQATGEKLTAYTA LDFTLKVHGQATGEKLTAYTATPEAIYGTS K V H E K L 1 0 0 0 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 0 9 0 925.46174 Q15031 Q15031 287 295 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 0.008339 108.43 By MS/MS 4 0 1 1 796720 796720 0 14982 1467 15891 38085 26880 26880 1 21750 0 VHHEPQLSDK CTAFALSKPTEKKDRVHHEPQLSDKVHNDA EKKDRVHHEPQLSDKVHNDAQSFDYDHDAF R V H D K V 0 0 0 1 0 1 1 0 2 0 1 1 0 0 1 1 0 0 0 1 0 0 10 0 1188.5887 O43852 O43852 28 37 CALU Calumenin yes yes 3 0.014805 103.26 By MS/MS 7 0 1 1 415420 415420 0 14983 231 15892 38086 26881 26881 1 7423.6 0 VHIEFTEGEDK KKGQNLAKITQQMPKVHIEFTEGEDKITLE QMPKVHIEFTEGEDKITLEGPTEDVNVAQE K V H D K I 0 0 0 1 0 0 3 1 1 1 0 1 0 1 0 0 1 0 0 1 0 0 11 0 1302.6092 Q00341 Q00341 397 407 HDLBP Vigilin yes yes 2 7.1961E-05 166.07 By MS/MS 3 0 1 1 1152100 1152100 0 14984 1231 15893 38087 26882 26882 1 30075 0 VHIEIGPDGR ENDIYNFFSPLNPVRVHIEIGPDGRVTGEA LNPVRVHIEIGPDGRVTGEADVEFATHEDA R V H G R V 0 1 0 1 0 0 1 2 1 2 0 0 0 0 1 0 0 0 0 1 0 0 10 0 1091.5724 P31943;P55795;P52597 P31943 317 326 HNRNPH1;HNRNPH2;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 2 0.031068 96.331 By MS/MS 6.5 0.5 1 1 2 8639300 8639300 0 14985 758;1037;988 15894 38088;38089 26883 26883 1 86857 0 VHLQTQQEVK SCGAACCTHPLDLLKVHLQTQQEVKLRMTG LDLLKVHLQTQQEVKLRMTGMALRVVRTDG K V H V K L 0 0 0 0 0 3 1 0 1 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1208.6513 Q9UBX3 Q9UBX3 32 41 SLC25A10 Mitochondrial dicarboxylate carrier yes yes 2;3 0.00013862 161.27 By MS/MS 5.17 3.24 1 1 1 2 1 6 14802000 14802000 0 14986 2761 15895 38090;38091;38092;38093;38094;38095 26884;26885;26886;26887 26884 4 1136800 0 VHLVGIDIFTGK VEMSTSKTGKHGHAKVHLVGIDIFTGKKYE HAKVHLVGIDIFTGKKYEDICPSTHNMDVP K V H G K K 0 0 0 1 0 0 0 2 1 2 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1297.7394 P63241;Q6IS14;Q9GZV4 P63241 56 67 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 2;3 8.0549E-05 159.34 By MS/MS 9.75 0.433 1 3 4 1927100 1927100 0 14987 1177 15896 38096;38097;38098;38099 26888;26889;26890 26888 3 2038700 0 VHQLYETIQR AKHKASVEDADTQSKVHQLYETIQRWSPIA DTQSKVHQLYETIQRWSPIASTLPELVQRL K V H Q R W 0 1 0 0 0 2 1 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1285.6779 Q13561 Q13561 309 318 DCTN2 Dynactin subunit 2 yes yes 2 0.0052613 111.61 By MS/MS 6 0 1 1 0 0 0 14988 1382 15897 38100 26891 26891 1 0 0 VHVQFFDDSPTR PFDGTFIREKGKSVRVHVQFFDDSPTRGWV SVRVHVQFFDDSPTRGWVSKRLLKPYTGSK R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 P52701 P52701 129 140 MSH6 DNA mismatch repair protein Msh6 yes yes 3 0.0083161 91.093 By MS/MS 3 0 1 1 437060 437060 0 14989 989 15898 38101 26892 26892 1 11409 0 VHVTQEDFEMAVAK GVCTEAGMYALRERRVHVTQEDFEMAVAKV RVHVTQEDFEMAVAKVMQKDSEKNMSIKKL R V H A K V 2 0 0 1 0 1 2 0 1 0 0 1 1 1 0 0 1 0 0 3 0 0 14 0 1602.7712 P62195 P62195 376 389 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0070361 94.191 By MS/MS 7 0 1 1 1027900 1027900 0 14990 1117 15899 38102 26893 26893 870 1 18369 0 VIAALLQTMEDQGNQR ATDFAPGFQKKFHEKVIAALLQTMEDQGNQ IAALLQTMEDQGNQRVQAHAAAALINFTED K V I Q R V 2 1 1 1 0 3 1 1 0 1 2 0 1 0 0 0 1 0 0 1 0 0 16 0 1785.9043 O00410 O00410 442 457 IPO5 Importin-5 yes yes 2;3 2.3146E-50 300.27 By MS/MS By MS/MS 4.33 0.471 4 2 5 1 3537500 3497600 39907 14991 91 15900;15901 38103;38104;38105;38106;38107;38108 26894;26895;26896;26897 26895 61 4 101930 83388 VIAATNRVDILDPALLR LLNQLDGFQPNTQVKVIAATNRVDILDPAL AATNRVDILDPALLRSGRLDRKIEFPMPNE K V I L R S 3 2 1 2 0 0 0 0 0 2 3 0 0 0 1 0 1 0 0 2 0 0 17 1 1849.0785 P17980 P17980 328 344 PSMC3 26S protease regulatory subunit 6A yes yes 3 0.0010836 114.01 By MS/MS 6.5 0.5 1 1 2 18281000 18281000 0 14992 618 15902 38109;38110 26898 26898 1 143690 0 VIAAVSHELITSTTR LPSITDVTMENNLSRVIAAVSHELITSTTR VIAAVSHELITSTTRALTFGCCEALCLLST R V I T R A 2 1 0 0 0 0 1 0 1 2 1 0 0 0 0 2 3 0 0 2 0 0 15 0 1596.8835 P42858 P42858 1005 1019 HTT Huntingtin yes yes 2 0.043701 69.602 By MS/MS 1.5 0.5 1 1 2 189570 189570 0 14993 858 15903 38111;38112 26899 26899 1 9285.7 0 VIAGLYQR RILELSGSSSEDSEKVIAGLYQRAFQHLSE SSEDSEKVIAGLYQRAFQHLSEAVQAAEEE K V I Q R A 1 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 8 0 918.5287 P78527 P78527 3373 3380 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.016506 111.28 By MS/MS 1.5 0.5 1 1 2 897890 897890 0 14994 1197 15904 38113;38114 26900;26901 26900 2 44051 0 VIAHGKDHPTAATK QGAVISPHYDSLLVKVIAHGKDHPTAATKM KVIAHGKDHPTAATKMSRALAEFRVRGVKT K V I T K M 3 0 0 1 0 0 0 1 2 1 0 2 0 0 1 0 2 0 0 1 0 0 14 1 1444.7787 P11498 P11498 429 442 PC Pyruvate carboxylase, mitochondrial yes yes 3 0.00086258 147.73 By MS/MS 4.5 1.12 1 1 1 1 4 1577200 1577200 0 14995 555 15905 38115;38116;38117;38118 26902 26902 1 36763 0 VIALEGDIVR SLVSPKNPEQKIIKRVIALEGDIVRTIGHK KIIKRVIALEGDIVRTIGHKNRYVKVPRGH R V I V R T 1 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1083.6288 Q96T52 Q96T52 93 102 IMMP2L Mitochondrial inner membrane protease subunit 2 yes yes 2 0.0012787 119.62 By MS/MS 9 0 1 1 1171400 1171400 0 14996 2260 15906 38119 26903 26903 1 672300 0 VIALGLPVPR ELDSWKIVRVSENFRVIALGLPVPRYSGNP SENFRVIALGLPVPRYSGNPLDPPLRSRFQ R V I P R Y 1 1 0 0 0 0 0 1 0 1 2 0 0 0 2 0 0 0 0 2 0 0 10 0 1033.6648 A3KMH1 A3KMH1 238 247 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.0033513 132.29 By MS/MS 3.5 1.12 1 1 1 1 4 1117700 1117700 0 14997 13 15907 38120;38121;38122;38123 26904 26904 1 40856 0 VIAPNPAQLQGQR SATNTTLPHMLMSQRVIAPNPAQLQGQRGP QRVIAPNPAQLQGQRGPPKPGLVRTTTPNM R V I Q R G 2 1 1 0 0 3 0 1 0 1 1 0 0 0 2 0 0 0 0 1 0 0 13 0 1390.7681 Q8WXI9 Q8WXI9 265 277 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.00030353 142.98 By MS/MS 5 0 1 1 2450800 2450800 0 14998 2047 15908 38124 26905 26905 1 100740 0 VIASELGSMPELK RKHFEANNGKLPDNKVIASELGSMPELKKY NKVIASELGSMPELKKYMKKVMPFVAMIKE K V I L K K 1 0 0 0 0 0 2 1 0 1 2 1 1 0 1 2 0 0 0 1 0 0 13 0 1372.7272 Q9P2J5 Q9P2J5 971 983 LARS Leucine--tRNA ligase, cytoplasmic yes yes 2 9.7674E-05 152.54 By MS/MS 3 0 1 1 517180 517180 0 14999 2738 15909 38125 26906 26906 1598 1 13501 0 VIAVADDFCK DGTDINALVRSHNRKVIAVADDFCKVHLFQ SHNRKVIAVADDFCKVHLFQYPCSKAKAPS K V I C K V 2 0 0 2 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 10 0 1136.5536 Q9HC35 Q9HC35 803 812 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 0.029605 85.676 By MS/MS 1.5 0.5 1 1 2 330840 330840 0 15000 2557 15910 38126;38127 26907 26907 1 16253 0 VIDFDENTALDDAEEESFR DTVTWDEYNIQMYDRVIDFDENTALDDAEE DENTALDDAEEESFRKLHLKDKKRFEKANQ R V I F R K 2 1 1 4 0 0 4 0 0 1 1 0 0 2 0 1 1 0 0 1 0 0 19 0 2213.9601 Q14257 Q14257 130 148 RCN2 Reticulocalbin-2 yes yes 2;3 2.8253E-19 236.12 By MS/MS 6.75 0.829 2 1 1 4 60418000 60418000 0 15001 1426 15911 38128;38129;38130;38131 26908;26909 26908 2 486290 0 VIDFDENTALDDAEEESFRK DTVTWDEYNIQMYDRVIDFDENTALDDAEE ENTALDDAEEESFRKLHLKDKKRFEKANQD R V I R K L 2 1 1 4 0 0 4 0 0 1 1 1 0 2 0 1 1 0 0 1 0 0 20 1 2342.055 Q14257 Q14257 130 149 RCN2 Reticulocalbin-2 yes yes 2;3 9.3132E-18 219.95 By MS/MS 6.75 0.829 2 1 1 4 95363000 95363000 0 15002 1426 15912 38132;38133;38134;38135 26910;26911 26910 2 768680 0 VIDGLETLDELEK GKQPHLDMKYTVFGKVIDGLETLDELEKLP GKVIDGLETLDELEKLPVNEKTYRPLNDVH K V I E K L 0 0 0 2 0 0 3 1 0 1 3 1 0 0 0 0 1 0 0 1 0 0 13 0 1472.761 Q9H2H8 Q9H2H8 121 133 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 2 0.0031197 113.67 By MS/MS 10 0 1 1 107790 107790 0 15003 2477 15913 38136 26912 26912 1 114570 0 VIDPATATSVDLR YSSLLSPMSVNAVMKVIDPATATSVDLRDI MKVIDPATATSVDLRDIKIVKKLGGTIDDC K V I L R D 2 1 0 2 0 0 0 0 0 1 1 0 0 0 1 1 2 0 0 2 0 0 13 0 1356.7249 P50991 P50991 194 206 CCT4 T-complex protein 1 subunit delta yes yes 2 2.6756E-06 192.44 By MS/MS By MS/MS 5.55 2.74 1 1 1 1 1 2 1 1 1 1 10 1 420060000 419560000 504380 15004 956 15914 38137;38138;38139;38140;38141;38142;38143;38144;38145;38146;38147 26913;26914;26915;26916;26917;26918;26919;26920;26921;26922;26923 26918 11 9089900 1546900 VIDPATATSVDLRDIK YSSLLSPMSVNAVMKVIDPATATSVDLRDI IDPATATSVDLRDIKIVKKLGGTIDDCELV K V I I K I 2 1 0 3 0 0 0 0 0 2 1 1 0 0 1 1 2 0 0 2 0 0 16 1 1712.9309 P50991 P50991 194 209 CCT4 T-complex protein 1 subunit delta yes yes 2 6.582E-05 152 By MS/MS 7.5 1.12 1 1 1 1 4 15492000 15492000 0 15005 956 15915 38148;38149;38150;38151 26924 26924 1 184870 0 VIDPVAPR VVNMEWDKIWAFNKKVIDPVAPRYVALLKK IWAFNKKVIDPVAPRYVALLKKEVIPVNVP K V I P R Y 1 1 0 1 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 2 0 0 8 0 865.50215 P07814 P07814 499 506 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0082883 124.83 By MS/MS 4 0.816 1 1 1 3 11866000 11866000 0 15006 493 15916 38152;38153;38154 26925 26925 1 321790 0 VIDPVTGKPCAGTTYLESPLSSETTQLSK HVKHELAEIVFKVGKVIDPVTGKPCAGTTY YLESPLSSETTQLSKNLEELNISSAQ____ K V I S K N 1 0 0 1 1 1 2 2 0 1 3 2 0 0 3 4 5 0 1 2 0 0 29 1 3078.5431 Q9Y2R5 Q9Y2R5 91 119 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 3 0.0064249 29.815 By MS/MS 10 0 1 1 234320 234320 0 15007 2898 15917 38155 26926 26926 1 249060 0 VIDQQNGLYR NCMYQACPTQDCNKKVIDQQNGLYRCEKCD DCNKKVIDQQNGLYRCEKCDTEFPNFKYRM K V I Y R C 0 1 1 1 0 2 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 10 0 1204.62 P27694 P27694 490 499 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.00029365 153.05 By MS/MS 5 0 1 1 1608700 1608700 0 15008 708 15918 38156 26927 26927 1 66125 0 VIDVGSEWR GDMICPECGLVVGDRVIDVGSEWRTFSNDK LVVGDRVIDVGSEWRTFSNDKATKDPSRVG R V I W R T 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 1 0 2 0 0 9 0 1059.5349 Q00403 Q00403 45 53 GTF2B Transcription initiation factor IIB yes yes 2 0.0051036 115.49 By MS/MS 8 0 1 1 835270 835270 0 15009 1232 15919 38157 26928 26928 1 55103 0 VIEAVSEELSR VFTISKELVPRVLSKVIEAVSEELSRLMQC VLSKVIEAVSEELSRLMQCVSSFSKNGALQ K V I S R L 1 1 0 0 0 0 3 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1230.6456 Q96KP1 Q96KP1 828 838 EXOC2 Exocyst complex component 2 yes yes 2 0.00010861 185.33 By MS/MS 3.5 0.5 1 1 2 2538500 2538500 0 15010 2221 15920 38158;38159 26929 26929 1 69238 0 VIEAYCTSAK RKSTAALEEDAQILKVIEAYCTSAKTRQTL AQILKVIEAYCTSAKTRQTLNSTWQGTDLM K V I A K T 2 0 0 0 1 0 1 0 0 1 0 1 0 0 0 1 1 0 1 1 0 0 10 0 1140.5485 Q14155 Q14155 716 725 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 2 0.018921 93.111 By MS/MS 5 0 1 1 836130 836130 0 15011 1410 15921 38160 26930 26930 1 34368 0 VIECNVR GPFNLQLIAKDDQLKVIECNVRVSRSFPFV IAKDDQLKVIECNVRVSRSFPFVSKTLGVD K V I V R V 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 888.44874 P27708 P27708 1212 1218 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.02681 117.16 By MS/MS 2 0.816 1 1 1 3 3409000 3409000 0 15012 709 15922 38161;38162;38163 26931;26932 26932 2 159720 0 VIECSYTSADGQR RRTDGRCLIWGRKPKVIECSYTSADGQRHH PKVIECSYTSADGQRHHSKLLVSGFWGVAR K V I Q R H 1 1 0 1 1 1 1 1 0 1 0 0 0 0 0 2 1 0 1 1 0 0 13 0 1484.6566 Q9UBM7 Q9UBM7 377 389 DHCR7 7-dehydrocholesterol reductase yes yes 2 1.3699E-17 261.52 By MS/MS 4.38 3.46 2 2 1 1 1 1 8 5679800 5679800 0 15013 2753 15923 38164;38165;38166;38167;38168;38169;38170;38171 26933;26934;26935;26936;26937 26935 5 491960 0 VIEEQLEPAVEK VIEPQYFGLAYLFRKVIEEQLEPAVEKISI FRKVIEEQLEPAVEKISIMAERLANQFAIY K V I E K I 1 0 0 0 0 1 4 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 12 0 1382.7293 P42704 P42704 1225 1236 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 8.5933E-11 196.67 By MS/MS 5.5 2.29 1 1 1 1 1 1 1 1 8 59254000 59254000 0 15014 854 15924 38172;38173;38174;38175;38176;38177;38178;38179 26938;26939;26940;26941;26942;26943 26939 6 1664000 0 VIEEQLEPAVEKISIMAER VIEPQYFGLAYLFRKVIEEQLEPAVEKISI QLEPAVEKISIMAERLANQFAIYKPVTDFF K V I E R L 2 1 0 0 0 1 5 0 0 3 1 1 1 0 1 1 0 0 0 2 0 0 19 1 2183.1508 P42704 P42704 1225 1243 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 3 0.001057 99.273 By MS/MS 3 0 1 1 1689200 1689200 0 15015 854 15925 38180 26944 26944 606 1 44096 0 VIEGDVVSALNK HYNQLFGDVCFHCNRVIEGDVVSALNKAWC CNRVIEGDVVSALNKAWCVNCFACSTCNTK R V I N K A 1 0 1 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 3 0 0 12 0 1242.682 P48059 P48059 258 269 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 2 1.3378E-17 250.92 By MS/MS 8 0 1 1 7231500 7231500 0 15016 901 15926 38181 26945 26945 1 477060 0 VIEITIYEDR PQGLLLTDPIERGLRVIEITIYEDRGMSSG ERGLRVIEITIYEDRGMSSGR_________ R V I D R G 0 1 0 1 0 0 2 0 0 3 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1249.6554 Q7Z5G4 Q7Z5G4 122 131 GOLGA7 Golgin subfamily A member 7 yes yes 2 0.00015166 159.79 By MS/MS 10 0 1 1 361790 361790 0 15017 1799 15927 38182 26946 26946 1 384540 0 VIELENWTEGK MNAFSGVMMLQLLEKVIELENWTEGKGLIV LLEKVIELENWTEGKGLIVRGAKNTFSSGS K V I G K G 0 0 1 0 0 0 3 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 11 0 1316.6612 Q9NTX5 Q9NTX5 90 100 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 2 1.0268E-10 203.02 By MS/MS 8 0 1 1 3983800 3983800 0 15018 2633 15928 38183 26947 26947 1 262810 0 VIELTGDVTPDMK MDDWKVRIEEKLGKKVIELTGDVTPDMKSI KKVIELTGDVTPDMKSIAKADLIVTTPEKW K V I M K S 0 0 0 2 0 0 1 1 0 1 1 1 1 0 1 0 2 0 0 2 0 0 13 0 1416.717 Q8N3C0 Q8N3C0 1404 1416 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.0085747 91.937 By MS/MS 1 0 2 2 296770 296770 0 15019 1908 15929;15930 38184;38185 26948;26949;26950 26948 1294 3 14500 0 VIEQLLVGLK EDDDEDDDVPEGVERVIEQLLVGLKDKDTV EGVERVIEQLLVGLKDKDTVVRWSAAKGIG R V I L K D 0 0 0 0 0 1 1 1 0 1 3 1 0 0 0 0 0 0 0 2 0 0 10 0 1110.7012 Q9BTW9 Q9BTW9 361 370 TBCD Tubulin-specific chaperone D yes yes 2 0.00072888 135.43 By MS/MS 3.5 0.5 1 1 2 371000 371000 0 15020 2354 15931 38186;38187 26951 26951 1 10081 0 VIFLEDDDVAAVVDGR YFASDASAVIEHTNRVIFLEDDDVAAVVDG IFLEDDDVAAVVDGRLSIHRIKRTAGDHPG R V I G R L 2 1 0 4 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 4 0 0 16 0 1731.8679 Q06210 Q06210 291 306 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 0.00011369 164.13 By MS/MS 5 0 1 1 166200 166200 0 15021 1274 15932 38188 26952 26952 1 6831.4 0 VIFLENYR ADVVNNDPMVGSKLKVIFLENYRVSLAEKV MVGSKLKVIFLENYRVSLAEKVIPATDLSE K V I Y R V 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1052.5655 P06737;P11217;P11216 P06737 643 650 PYGL;PYGM;PYGB Glycogen phosphorylase, liver form;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form yes no 2 0.0038523 143.61 By MS/MS 4.5 0.5 1 1 2 1419500 1419500 0 15022 483 15933 38189;38190 26953 26953 1 41005 0 VIFPAPTPK MGHVIRGTVVMKDGKVIFPAPTPKNIPQGA VMKDGKVIFPAPTPKNIPQGAPVKQKTVAE K V I P K N 1 0 0 0 0 0 0 0 0 1 0 1 0 1 3 0 1 0 0 1 0 0 9 0 968.5695 Q13423 Q13423 434 442 NNT NAD(P) transhydrogenase, mitochondrial yes yes 2 0.016646 98.629 By MS/MS 2 0.816 1 1 1 3 800940 800940 0 15023 1367 15934 38191;38192;38193 26954 26954 1 36703 0 VIFVDDYAVGCR PGGQVKCQYISAVDKVIFVDDYAVGCRKDL VDKVIFVDDYAVGCRKDLNGILLLDTALQT K V I C R K 1 1 0 2 1 0 0 1 0 1 0 0 0 1 0 0 0 0 1 3 0 0 12 0 1412.6758 Q9NR09 Q9NR09 126 137 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 0.0040121 111.06 By MS/MS 1 0 1 1 52734 52734 0 15024 2596 15935 38194 26955 26955 1 2576.5 0 VIGDNPWTPEQLEQCK IPQPPPGMSFYAAKRVIGDNPWTPEQLEQC IGDNPWTPEQLEQCKLGIVKFIEAEQVPEL R V I C K L 0 0 1 1 1 2 2 1 0 1 1 1 0 0 2 0 1 1 0 1 0 0 16 0 1912.8989 Q5VYK3 Q5VYK3 229 244 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 8.3222E-06 159.12 By MS/MS 3.5 0.5 1 1 2 1643000 1643000 0 15025 1657 15936 38195;38196 26956 26956 1 43043 0 VIGELVGHTER VGPGAGESPGTPPFRVIGELVGHTERVSGF PPFRVIGELVGHTERVSGFTFSHHPGQYNL R V I E R V 0 1 0 0 0 0 2 2 1 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1208.6513 Q8TEQ6 Q8TEQ6 56 66 GEMIN5 Gem-associated protein 5 yes yes 2 0.00041734 146.11 By MS/MS 3 0 1 1 1910600 1910600 0 15026 2003 15937 38197 26957 26957 1 49875 0 VIGGDDLSTLTGK RLKSYCNDQSTGDIKVIGGDDLSTLTGKNV IKVIGGDDLSTLTGKNVLIVEDIIDTGKTM K V I G K N 0 0 0 2 0 0 0 3 0 1 2 1 0 0 0 1 2 0 0 1 0 0 13 0 1274.6718 P00492 P00492 116 128 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 1.3238E-05 205.52 By MS/MS 8.5 0.5 1 1 2 1340100 1340100 0 15027 429 15938 38198;38199 26958 26958 1 475670 0 VIGHYAGEDATDAFR YNITKWSIQHPGGQRVIGHYAGEDATDAFR VIGHYAGEDATDAFRAFHPDLEFVGKFLKP R V I F R A 3 1 0 2 0 0 1 2 1 1 0 0 0 1 0 0 1 0 1 1 0 0 15 0 1620.7532 O95864 O95864 59 73 FADS2 Fatty acid desaturase 2 yes yes 3 0.011985 79.875 By MS/MS 1 0 1 1 349390 349390 0 15028 411 15939 38200 26959 26959 1 17070 0 VIGLSSDLQQVGGASAR IGVDLIMKTCFSPNRVIGLSSDLQQVGGAS GLSSDLQQVGGASARIQDALSTVLQYAEDV R V I A R I 2 1 0 1 0 2 0 3 0 1 2 0 0 0 0 3 0 0 0 2 0 0 17 0 1656.8795 O00303 O00303 262 278 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2;3 1.6061E-33 296.97 By MS/MS By MS/MS 7.56 1.26 2 3 2 1 1 8 1 108360000 108300000 69195 15029 88 15940 38201;38202;38203;38204;38205;38206;38207;38208;38209 26960;26961;26962;26963;26964;26965 26962 6 2098800 284060 VIGNQSLVNELAFTAR VGLAADVGTLQRLPKVIGNQSLVNELAFTA IGNQSLVNELAFTARKMMADEALGSGLVSR K V I A R K 2 1 2 0 0 1 1 1 0 1 2 0 0 1 0 1 1 0 0 2 0 0 16 0 1730.9315 Q13011 Q13011 215 230 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 2 1.4434E-38 258.02 By MS/MS 8 0 1 1 475240 475240 0 15030 1324 15941 38210 26966 26966 1 31351 0 VIGSELVQK CARAVANRTDACFIRVIGSELVQKYVGEGA DACFIRVIGSELVQKYVGEGARMVRELFEM R V I Q K Y 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 9 0 971.56515 P35998 P35998 240 248 PSMC2 26S protease regulatory subunit 7 yes yes 2 0.044743 82.75 By MS/MS 7.5 0.5 1 1 2 16775000 16775000 0 15031 801 15942 38211;38212 26967 26967 1 372560 0 VIGSGCNLDSAR LTYVTWKLSGLPKHRVIGSGCNLDSARFRY KHRVIGSGCNLDSARFRYLMAEKLGIHPSS R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 P07195;Q6ZMR3;P07864;P00338 P07195 159 170 LDHB;LDHAL6A;LDHC;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain no no 2 8.5506E-05 155.26 By MS/MS By matching 8.33 0.471 2 1 2 1 13527000 13486000 41179 15032 486;424 15943 38213;38214;38215 26968;26969 26968 2 1058600 351310 VIGTLLGTVDK SIVDSYERRNEGAARVIGTLLGTVDKHSVE GAARVIGTLLGTVDKHSVEVTNCFSVPHNE R V I D K H 0 0 0 1 0 0 0 2 0 1 2 1 0 0 0 0 2 0 0 2 0 0 11 0 1114.6598 O00303 O00303 116 126 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 6.5366E-16 215.93 By MS/MS By MS/MS 6.8 0.748 2 2 1 3 2 32205000 32108000 97453 15033 88 15944 38216;38217;38218;38219;38220 26970;26971;26972;26973 26972 3 455180 372250 VIGVLEPLDPEDYTK FTHKKQSGGAGQYGKVIGVLEPLDPEDYTK VIGVLEPLDPEDYTKLEFSDETFGSNIPKQ K V I T K L 0 0 0 2 0 0 2 1 0 1 2 1 0 0 2 0 1 0 1 2 0 0 15 0 1686.8716 Q96RP9 Q96RP9 552 566 GFM1 Elongation factor G, mitochondrial yes yes 2 0.00026894 131.12 By MS/MS 5.2 1.72 1 1 1 1 1 5 3540300 3540300 0 15034 2247 15945 38221;38222;38223;38224;38225 26974;26975 26975 2 133940 0 VIHECQQR EIRCRKYLHPSSYTKVIHECQQRMVADHLQ HPSSYTKVIHECQQRMVADHLQFLHAECHN K V I Q R M 0 1 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 1068.5135 Q13617 Q13617 262 269 CUL2 Cullin-2 yes yes 2 0.0062815 136.11 By MS/MS 5 0 1 1 0 0 0 15035 1388 15946 38226 26976 26976 1 0 0 VIHLVER LQDDKKLQEYNVGGKVIHLVERAPPQTHLP QEYNVGGKVIHLVERAPPQTHLPSGASSGT K V I E R A 0 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 2 0 0 7 0 864.51814 P46379 P46379 81 87 BAG6 Large proline-rich protein BAG6 yes yes 2 0.043839 105.39 By MS/MS 3 0 1 1 352860 352860 0 15036 880 15947 38227 26977 26977 1 9211.6 0 VIHSILNSPYAK EHYIPRAVLLDLEPRVIHSILNSPYAKLYN EPRVIHSILNSPYAKLYNPENIYLSEHGGG R V I A K L 1 0 1 0 0 0 0 0 1 2 1 1 0 0 1 2 0 0 1 1 0 0 12 0 1340.7452 P23258;Q9NRH3 P23258 73 84 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2 0.014851 114.89 By MS/MS 6.5 0.5 1 1 2 2900200 2900200 0 15037 666 15948 38228;38229 26978 26978 0 28758 0 VIIEKYYTR ______________________________ VKKAARVIIEKYYTRLGNDFHTNKRVCEEI R V I T R L 0 1 0 0 0 0 1 0 0 2 0 1 0 0 0 0 1 0 2 1 0 0 9 1 1183.6601 P08708 P08708 15 23 RPS17 40S ribosomal protein S17 yes yes 2 0.006968 137.05 By MS/MS By matching 10 0 2 1 1 721590 688480 33110 15038 507 15949 38230;38231 26979 26979 1 731780 849260 VIILSLDR EMRAPKHFLPEMLSKVIILSLDRSDEDKEK LPEMLSKVIILSLDRSDEDKEKASSLISLL K V I D R S 0 1 0 1 0 0 0 0 0 2 2 0 0 0 0 1 0 0 0 1 0 0 8 0 927.57532 P78344 P78344 585 592 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 2 0.017402 110.12 By MS/MS 4 0.816 1 1 1 3 3718700 3718700 0 15039 1192 15950 38232;38233;38234 26980 26980 1 105390 0 VIILSLDRSDEDKEK EMRAPKHFLPEMLSKVIILSLDRSDEDKEK VIILSLDRSDEDKEKASSLISLLKQEGIAT K V I E K A 0 1 0 3 0 0 2 0 0 2 2 2 0 0 0 2 0 0 0 1 0 0 15 2 1758.9363 P78344 P78344 585 599 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 3 0.041409 63.292 By MS/MS 4.5 0.5 1 1 2 9263700 9263700 0 15040 1192 15951 38235;38236 26981 26981 1 275590 0 VIIMILNGEK LEKGDVKSKTEALKKVIIMILNGEKLPGLL EALKKVIIMILNGEKLPGLLMTIIRFVLPL K V I E K L 0 0 1 0 0 0 1 1 0 3 1 1 1 0 0 0 0 0 0 1 0 0 10 0 1128.6577 P53618 P53618 45 54 COPB1 Coatomer subunit beta yes yes 2 0.00031034 146.79 By MS/MS 4 0 2 2 768760 768760 0 15041 1004 15952;15953 38237;38238 26982;26983 26982 775 2 20986 0 VIITGDAFVPGER LTLPVALLETMFGVKVIITGDAFVPGERSV VKVIITGDAFVPGERSVIIMNHRTRMDWMF K V I E R S 1 1 0 1 0 0 1 2 0 2 0 0 0 1 1 0 1 0 0 2 0 0 13 0 1372.7351 Q6UWP7 Q6UWP7 104 116 LCLAT1 Lysocardiolipin acyltransferase 1 yes yes 2 1.517E-05 133.89 By MS/MS 1 0 1 1 0 0 0 15042 1729 15954 38239 26984 26984 1 0 0 VIITNFPAAK NDTAPRAMAVLESLRVIITNFPAAKSLDIQ LESLRVIITNFPAAKSLDIQVPNFPADETK R V I A K S 2 0 1 0 0 0 0 0 0 2 0 1 0 1 1 0 1 0 0 1 0 0 10 0 1072.6281 P47897 P47897 577 586 QARS Glutamine--tRNA ligase yes yes 2 0.0034831 112.41 By MS/MS 4.5 0.5 1 1 2 2595100 2595100 0 15043 896 15955 38240;38241 26985 26985 1 103430 0 VIIVGLDNAGK LFTRIWRLFNHQEHKVIIVGLDNAGKTTIL QEHKVIIVGLDNAGKTTILYQFSMNEVVHT K V I G K T 1 0 1 1 0 0 0 2 0 2 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1097.6445 Q9Y689;Q96KC2 Q9Y689 19 29 ARL5A;ARL5B ADP-ribosylation factor-like protein 5A;ADP-ribosylation factor-like protein 5B yes no 2 0.0056435 125.71 By MS/MS 9.5 0.5 1 1 2 1028500 1028500 0 15044 2218 15956 38242;38243 26986;26987 26987 2 802960 0 VIKDFMIQGGDFTR TGEKGFGYKNSKFHRVIKDFMIQGGDFTRG RVIKDFMIQGGDFTRGDGTGGKSIYGERFP R V I T R G 0 1 0 2 0 1 0 2 0 2 0 1 1 2 0 0 1 0 0 1 0 0 14 1 1625.8236 P23284 P23284 96 109 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 3 0.0091965 81.448 By MS/MS 9 0 1 1 756670 756670 0 15045 667 15957 38244 26988 26988 449 1 434260 0 VILDLTPNYR DFDSLLQSAKKKSIRVILDLTPNYRGENSW KKSIRVILDLTPNYRGENSWFSTQVDTVAT R V I Y R G 0 1 1 1 0 0 0 0 0 1 2 0 0 0 1 0 1 0 1 1 0 0 10 0 1202.6659 P08195 P08195 304 313 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 2 0.0010075 122.52 By MS/MS 5 0.816 1 1 1 3 4891800 4891800 0 15046 499 15958 38245;38246;38247 26989;26990 26989 2 160190 0 VILHLKEDQTEYLEER TVRADHGEPIGRGTKVILHLKEDQTEYLEE ILHLKEDQTEYLEERRVKEVVKKHSQFIGY K V I E R R 0 1 0 1 0 1 4 0 1 1 3 1 0 0 0 0 1 0 1 1 0 0 16 1 2014.0371 P07900;P08238;Q58FF7;Q58FF6 P08238 181 196 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 3 1.5056E-06 151.9 By MS/MS 5 0.816 1 1 1 3 13432000 13432000 0 15047 501;494 15959 38248;38249;38250 26991;26992;26993 26991 3 267220 0 VILIQEQLSK PLDPGGYFIVKGVEKVILIQEQLSKNRIIV KGVEKVILIQEQLSKNRIIVEADRKGAVGA K V I S K N 0 0 0 0 0 2 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 10 0 1169.702 Q9NW08 Q9NW08 177 186 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.00057596 142 By MS/MS 3.5 0.5 1 1 2 2296100 2296100 0 15048 2664 15960 38251;38252 26994;26995 26995 2 61215 0 VILLDVAR SPCNTLAAVTDDFGRVILLDVARGIAIRMW VTDDFGRVILLDVARGIAIRMWKGYRDAQI R V I A R G 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 8 0 897.56475 Q9H2M9 Q9H2M9 408 415 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 0.01687 110.81 By MS/MS 4 0.816 1 1 1 3 2630800 2630800 0 15049 2481 15961 38253;38254;38255 26996 26996 1 70005 0 VILLGDGGVGK ______________________________ SLFKVILLGDGGVGKSSLMNRYVTNKFDTQ K V I G K S 0 0 0 1 0 0 0 4 0 1 2 1 0 0 0 0 0 0 0 2 0 0 11 0 1026.6073 P51151;Q9NP90 P51151 10 20 RAB9A;RAB9B Ras-related protein Rab-9A;Ras-related protein Rab-9B no no 2 0.00091662 134.77 By MS/MS 9 0 1 1 3489400 3489400 0 15050 961;2577 15962 38256 26997 26997 1 2002600 0 VIMGEEVEPVGLMTGSGVVGVK VSKTLGVDLVALATRVIMGEEVEPVGLMTG EPVGLMTGSGVVGVKVPQFSFSRLAGADVV R V I V K V 0 0 0 0 0 0 3 5 0 1 1 1 2 0 1 1 1 0 0 6 0 0 22 0 2186.1327 P27708 P27708 1241 1262 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2;3 2.759E-15 175.29 By MS/MS 2 0.816 2 2 2 6 1788900 1788900 0 15051 709 15963 38257;38258;38259;38260;38261;38262 26998;26999;27000;27001 27000 484;485 4 79466 0 VIMITGDNK EVASSVKLCRQAGIRVIMITGDNKGTAVAI RQAGIRVIMITGDNKGTAVAICRRIGIFGQ R V I N K G 0 0 1 1 0 0 0 1 0 2 0 1 1 0 0 0 1 0 0 1 0 0 9 0 989.52157 P16615;O14983 P16615 620 628 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 0.0018319 128.12 By MS/MS 1.5 0.5 2 2 4 2885600 2885600 0 15052 608 15964;15965 38263;38264;38265;38266 27002;27003;27004;27005;27006 27002 400 5 142070 0 VIMVTGDHPITAK AVPDAVGKCRSAGIKVIMVTGDHPITAKAI IKVIMVTGDHPITAKAIAKGVGIISEGNET K V I A K A 1 0 0 1 0 0 0 1 1 2 0 1 1 0 1 0 2 0 0 2 0 0 13 0 1380.7435 P05023;P50993;Q13733;P20648;P13637;P54707 P05023 613 625 ATP1A1;ATP1A2;ATP1A4;ATP4A;ATP1A3;ATP12A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2 no no 2;3 1.0075E-07 183.03 By MS/MS 2.69 1.26 3 3 3 3 1 13 14126000 14126000 0 15053 463;575;1016 15966;15967 38267;38268;38269;38270;38271;38272;38273;38274;38275;38276;38277;38278;38279 27007;27008;27009;27010;27011 27007 254 5 534080 0 VINEEYK MADKEAAFDDAVEERVINEEYKIWKKNTPF FDDAVEERVINEEYKIWKKNTPFLYDLVMT R V I Y K I 0 0 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 7 0 893.44945 Q09028;Q16576 Q09028 16 22 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 2 0.015477 138.83 By MS/MS By matching 6 0 2 1 1 8413700 8381700 32045 15054 1296;1541 15968 38280;38281 27012;27013 27012 2 65361 98280 VINEPTAAALAYGLDK ATKDAGQISGLNVLRVINEPTAAALAYGLD INEPTAAALAYGLDKSEDKVIAVYDLGGGT R V I D K S 4 0 1 1 0 0 1 1 0 1 2 1 0 0 1 0 1 0 1 1 0 0 16 0 1644.8723 P38646 P38646 219 234 HSPA9 Stress-70 protein, mitochondrial yes yes 2;3 4.5424E-10 195.1 By MS/MS By MS/MS 6.43 1.5 3 1 1 1 1 6 1 18933000 18894000 39564 15055 820 15969 38282;38283;38284;38285;38286;38287;38288 27014;27015;27016;27017 27017 4 777210 117070 VINLNDNTFTEK ITALAQAFAVNPLLRVINLNDNTFTEKGAV LLRVINLNDNTFTEKGAVAMAETLKTLRQV R V I E K G 0 0 3 1 0 0 1 0 0 1 1 1 0 1 0 0 2 0 0 1 0 0 12 0 1406.7042 P46060 P46060 240 251 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 6.076E-07 177.57 By MS/MS 5.5 1.12 1 1 1 1 4 23276000 23276000 0 15056 876 15970 38289;38290;38291;38292 27018;27019 27018 2 900880 0 VINQILTEMDGMSTK ARGGNIGDGGGAADRVINQILTEMDGMSTK VINQILTEMDGMSTKKNVFIIGATNRPDII R V I T K K 0 0 1 1 0 1 1 1 0 2 1 1 2 0 0 1 2 0 0 1 0 0 15 0 1678.827 P55072 P55072 600 614 VCP Transitional endoplasmic reticulum ATPase yes yes 2 2.3362E-22 232.5 By MS/MS 4 0 1 1 540910 540910 0 15057 1026 15971 38293 27020 27020 802;803 1 14766 0 VIPLISDAGLR FRKQSHPEIISYLEKVIPLISDAGLRWRLT YLEKVIPLISDAGLRWRLTDLCTKIQRGTH K V I L R W 1 1 0 1 0 0 0 1 0 2 2 0 0 0 1 1 0 0 0 1 0 0 11 0 1152.6867 Q6P1Q0 Q6P1Q0 201 211 LETMD1 LETM1 domain-containing protein 1 yes yes 2 0.0034112 114.4 By MS/MS 8.5 0.5 1 1 2 1109400 1109400 0 15058 1703 15972 38294;38295 27021 27021 1 127440 0 VIQALAMK VLDQQQTPSRLAVTRVIQALAMKGDVENIE SRLAVTRVIQALAMKGDVENIEVVQKMLNG R V I M K G 2 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 872.51536 P42704 P42704 1145 1152 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.028427 94.662 By MS/MS 3 0 1 1 3891800 3891800 0 15059 854 15973 38296 27022 27022 616 1 101590 0 VIQALAMKGDVENIEVVQK VLDQQQTPSRLAVTRVIQALAMKGDVENIE LAMKGDVENIEVVQKMLNGLEDSIGLSKMV R V I Q K M 2 0 1 1 0 2 2 1 0 2 1 2 1 0 0 0 0 0 0 4 0 0 19 1 2083.1347 P42704 P42704 1145 1163 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2;3 4.4277E-09 162.7 By MS/MS 4 0.816 2 2 2 6 73287000 73287000 0 15060 854 15974 38297;38298;38299;38300;38301;38302 27023;27024;27025 27024 616 3 1935300 0 VIQCFAETGQVQK TLALSVYLRANVPNKVIQCFAETGQVQKIV NKVIQCFAETGQVQKIVLYAKKVGYTPDWI K V I Q K I 1 0 0 0 1 3 1 1 0 1 0 1 0 1 0 0 1 0 0 2 0 0 13 0 1506.7501 Q00610 Q00610 488 500 CLTC Clathrin heavy chain 1 yes yes 2 1.4747E-34 252.97 By MS/MS 2.5 1.12 1 1 1 1 4 2582900 2582900 0 15061 1235 15975 38303;38304;38305;38306 27026;27027;27028 27028 3 83341 0 VIQEGLEGLVLK KRVTKALDLADMITRVIQEGLEGLVLKDVK ITRVIQEGLEGLVLKDVKGTYEPGKRHWLK R V I L K D 0 0 0 0 0 1 2 2 0 1 3 1 0 0 0 0 0 0 0 2 0 0 12 0 1296.7653 P49916 P49916 649 660 LIG3 DNA ligase 3 yes yes 2 0.0002547 150.09 By MS/MS 4.5 0.5 1 1 2 737640 737640 0 15062 941 15976 38307;38308 27029 27029 1 22192 0 VIQENEHALQK PEIQKEHRNLLQELKVIQENEHALQKDALS QELKVIQENEHALQKDALSIKLKLEQIDGH K V I Q K D 1 0 1 0 0 2 2 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 11 0 1307.6834 Q9NTJ3 Q9NTJ3 999 1009 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.00036627 153.1 By MS/MS 3 0 1 1 743760 743760 0 15063 2630 15977 38309 27030 27030 1 19416 0 VIQGDGVDINTLQEIVEGMK TENSKGYKLLPPYLRVIQGDGVDINTLQEI GVDINTLQEIVEGMKQKMWSIENIAFGSGG R V I M K Q 0 0 1 2 0 2 2 3 0 3 1 1 1 0 0 0 1 0 0 3 0 0 20 0 2157.0987 P43490 P43490 350 369 NAMPT Nicotinamide phosphoribosyltransferase yes yes 2 2.4337E-18 179.66 By MS/MS 6 0 1 1 377270 377270 0 15064 866 15978 38310 27031 27031 1 2941.9 0 VIQHNALEDR IKRHKWNDFAEDSLRVIQHNALEDRSISDK EDSLRVIQHNALEDRSISDKQQWDAAIYFM R V I D R S 1 1 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1193.6153 O60313 O60313 724 733 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 2;3 0.001763 118.03 By MS/MS 4.33 0.471 2 1 3 2901600 2901600 0 15065 244 15979 38311;38312;38313 27032;27033 27032 2 87502 0 VIQIATSSSTAK RALTQFPLPKNLLAKVIQIATSSSTAKNLM LAKVIQIATSSSTAKNLMQFHTVGTKTKLS K V I A K N 2 0 0 0 0 1 0 0 0 2 0 1 0 0 0 3 2 0 0 1 0 0 12 0 1204.6663 Q7L2E3 Q7L2E3 252 263 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 8.7039E-11 196.44 By MS/MS By MS/MS 4.67 1.49 2 1 1 1 1 5 1 11996000 11949000 46532 15066 1763 15980 38314;38315;38316;38317;38318;38319 27034;27035;27036 27036 3 304310 66690 VIQQESYTYK KDVRKRRQVLKDLVKVIQQESYTYKDPITE KDLVKVIQQESYTYKDPITEFVECLYVNFD K V I Y K D 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 1 1 0 2 1 0 0 10 0 1257.6241 P60228 P60228 280 289 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.00074149 134.84 By MS/MS 7 0.816 1 1 1 3 1479300 1479300 0 15067 1065 15981 38320;38321;38322 27037 27037 1 21695 0 VIQTDEWR KLLRYAQTQGTGGKKVIQTDEWRNGPVEER QGTGGKKVIQTDEWRNGPVEERLEYALVKG K V I W R N 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 8 0 1045.5193 Q99707 Q99707 660 667 MTR Methionine synthase yes yes 2 0.021283 105.1 By MS/MS 3 0 1 1 607550 607550 0 15068 2284 15982 38323 27038 27038 1 15860 0 VIQVAAGSSNLK DVDKVAFTGSTEIGRVIQVAAGSSNLKRVT IGRVIQVAAGSSNLKRVTLELGGKSPNIIM R V I L K R 2 0 1 0 0 1 0 1 0 1 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1185.6717 P05091 P05091 269 280 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.00011779 181.4 By MS/MS By matching 6.33 0.471 2 1 2 1 9975700 9955900 19786 15069 467 15983 38324;38325;38326 27039 27039 1 81392 60683 VIQVAAGSSNLKR DVDKVAFTGSTEIGRVIQVAAGSSNLKRVT GRVIQVAAGSSNLKRVTLELGGKSPNIIMS R V I K R V 2 1 1 0 0 1 0 1 0 1 1 1 0 0 0 2 0 0 0 2 0 0 13 1 1341.7728 P05091 P05091 269 281 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 2 0.0072421 120.63 By MS/MS 7 0.816 1 1 1 3 5849100 5849100 0 15070 467 15984 38327;38328;38329 27040 27040 1 66579 0 VISALSEQANQR KEGVSINKSLLTLGKVISALSEQANQRSVF LGKVISALSEQANQRSVFIPYRESVLTWLL K V I Q R S 2 1 1 0 0 2 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1314.6892 Q15058 Q15058 636 647 KIF14 Kinesin-like protein KIF14 yes yes 2 1.3161E-05 201.75 By MS/MS By matching 3 0 2 1 1 1367400 1353700 13672 15071 1475 15985 38330;38331 27041 27041 1 35339 19595 VISDEDVLGTLLK NPRTLRYVPEESKDKVISDEDVLGTLLKVF DKVISDEDVLGTLLKVFQALFLNDFNKQSE K V I L K V 0 0 0 2 0 0 1 1 0 1 3 1 0 0 0 1 1 0 0 2 0 0 13 0 1400.7763 Q8NE22 Q8NE22 46 58 SETD9 SET domain-containing protein 9 yes yes 2 0.0043338 107.06 By MS/MS 8 0 1 1 122240 122240 0 15072 1961 15986 38332 27042 27042 1 8064.3 0 VISEPGEAEVFMTPEDFVR YSTPDKIFRYFATLKVISEPGEAEVFMTPE PGEAEVFMTPEDFVRSITPNEKQPEHLGLD K V I V R S 1 1 0 1 0 0 4 1 0 1 0 0 1 2 2 1 1 0 0 3 0 0 19 0 2151.0194 Q9BPX6 Q9BPX6 136 154 MICU1 Calcium uptake protein 1, mitochondrial yes yes 2 0.0028447 88.706 By MS/MS 6.5 0.5 1 1 2 801750 801750 0 15073 2303 15987 38333;38334 27043 27043 1454 1 10843 0 VISESPPDQWEAR EKLYRPPPVLDALGRVISESPPDQWEARCG GRVISESPPDQWEARCGLALALNKLSQYLD R V I A R C 1 1 0 1 0 1 2 0 0 1 0 0 0 0 2 2 0 1 0 1 0 0 13 0 1512.7209 Q92616 Q92616 1222 1234 GCN1L1 Translational activator GCN1 yes yes 2 9.6548E-12 203.03 By MS/MS 2 0.816 1 1 1 3 4120300 4120300 0 15074 2068 15988 38335;38336;38337 27044;27045;27046 27046 3 160710 0 VISFEEQVASIR AKEIYHFTLEKIQPRVISFEEQVASIRQHL QPRVISFEEQVASIRQHLASIYEKEEDWRN R V I I R Q 1 1 0 0 0 1 2 0 0 2 0 0 0 1 0 2 0 0 0 2 0 0 12 0 1376.73 Q9BT78 Q9BT78 96 107 COPS4 COP9 signalosome complex subunit 4 yes yes 2 2.0638E-16 217.02 By MS/MS 7 0 1 1 5763700 5763700 0 15075 2347 15989 38338 27047 27047 1 103000 0 VISFIENTSTPVDR MTVALKTKSVNVREKVISFIENTSTPVDRM KVISFIENTSTPVDRMSFNLPWPDRSCTER K V I D R M 0 1 1 1 0 0 1 0 0 2 0 0 0 1 1 2 2 0 0 2 0 0 14 0 1576.8097 Q9NUY8 Q9NUY8 505 518 TBC1D23 TBC1 domain family member 23 yes yes 2 5.3199E-35 297.83 By MS/MS 5 0 1 1 1135100 1135100 0 15076 2644 15990 38339 27048 27048 1 46657 0 VISGHQEALR NPVCEVSNYLFPDCRVISGHQEALRFLQKN FPDCRVISGHQEALRFLQKNSSKFHFRRTR R V I L R F 1 1 0 0 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1108.5989 Q8IVS2 Q8IVS2 237 246 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 0.0019308 153.97 By MS/MS 7 0 1 1 0 0 0 15077 1858 15991 38340 27049 27049 1 0 0 VISSIEQKTER VAYKNVVGARRSSWRVISSIEQKTERNEKK SSWRVISSIEQKTERNEKKQQMGKEYREKI R V I E R N 0 1 0 0 0 1 2 0 0 2 0 1 0 0 0 2 1 0 0 1 0 0 11 1 1288.6987 P31946 P31946 63 73 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 0.039708 106.16 By MS/MS 8 0 2 2 985280 985280 0 15078 760 15992 38341;38342 27050;27051 27050 2 64999 0 VISYEEGK PIMLVGNKKDLHMERVISYEEGKALAESWN KDLHMERVISYEEGKALAESWNAAFLESSA R V I G K A 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 1 1 0 0 8 0 923.46001 Q15382 Q15382 128 135 RHEB GTP-binding protein Rheb yes yes 2 0.054049 89.752 By MS/MS 10 0 1 1 392080 392080 0 15079 1493 15993 38343 27052 27052 1 416740 0 VITDENWR LWGAPWTHGRRSNVRVITDENWRELLEGDW GRRSNVRVITDENWRELLEGDWMIEFYAPW R V I W R E 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 8 0 1031.5036 Q9H3N1 Q9H3N1 33 40 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.048699 91.853 By MS/MS 8 0 1 1 1086900 1086900 0 15080 2489 15994 38344 27053 27053 1 71701 0 VITDIAGVIPAEK QSATRLTGGKEITEKVITDIAGVIPAEKID EKVITDIAGVIPAEKIDGVFAACQSGSFDK K V I E K I 2 0 0 1 0 0 1 1 0 3 0 1 0 0 1 0 1 0 0 2 0 0 13 0 1324.7602 P35249 P35249 261 273 RFC4 Replication factor C subunit 4 yes yes 2 0.0021591 118.9 By MS/MS 7.5 0.5 1 1 2 5135200 5135200 0 15081 785 15995 38345;38346 27054 27054 1 111500 0 VITEYLNAQESAK GLVMVEVRKEKQFQKVITEYLNAQESAKSA QKVITEYLNAQESAKSARLNLWRYGDFRAD K V I A K S 2 0 1 0 0 1 2 0 0 1 1 1 0 0 0 1 1 0 1 1 0 0 13 0 1464.746 Q7KZF4 Q7KZF4 874 886 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 7.8188E-47 288.15 By MS/MS By MS/MS 4 0 2 1 1 2970100 2912100 58010 15082 1757 15996 38347;38348 27055;27056 27056 2 79497 121220 VITIMQNPR LTKRAGELTEDEVERVITIMQNPRQYKIPD EDEVERVITIMQNPRQYKIPDWFLNRQKDV R V I P R Q 0 1 1 0 0 1 0 0 0 2 0 0 1 0 1 0 1 0 0 1 0 0 9 0 1070.5906 P62269 P62269 67 75 RPS18 40S ribosomal protein S18 yes yes 2 8.3542E-10 214.11 By MS/MS By matching 9.4 0.49 3 2 4 1 9434400 9309000 125410 15083 1124 15997;15998 38349;38350;38351;38352;38353 27057;27058;27059 27057 880 3 6873900 1351600 VITWTTEPK GDFINSSETRLAVSRVITWTTEPKSSDVRK RLAVSRVITWTTEPKSSDVRKAAQSVLISL R V I P K S 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 3 1 0 1 0 0 9 0 1073.5757 O75122 O75122 825 833 CLASP2 CLIP-associating protein 2 yes yes 2 0.0016822 133.23 By MS/MS 3 0 1 1 1015400 1015400 0 15084 279 15999 38354 27060 27060 1 26507 0 VIVAVGDR LHPIQTSFQEATASKVIVAVGDRSSNLRGE QEATASKVIVAVGDRSSNLRGECTPTQREV K V I D R S 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 3 0 0 8 0 827.4865 Q8TEM1 Q8TEM1 1577 1584 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.03979 95.352 By MS/MS 2 0.816 1 1 1 3 1256400 1256400 0 15085 2002 16000 38355;38356;38357 27061 27061 1 42107 0 VIVDFSSPNIAK LVNGVQLPALGENKKVIVDFSSPNIAKEMH NKKVIVDFSSPNIAKEMHVGHLRSTIIGES K V I A K E 1 0 1 1 0 0 0 0 0 2 0 1 0 1 1 2 0 0 0 2 0 0 12 0 1288.7027 P54136 P54136 194 205 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 4.6247E-07 181.87 By MS/MS 4 2 1 1 1 1 1 1 1 7 19524000 19524000 0 15086 1013 16001 38358;38359;38360;38361;38362;38363;38364 27062;27063 27062 2 718410 0 VIVPNMEFR NLFEDQNTLTSICEKVIVPNMEFRAADEEA TSICEKVIVPNMEFRAADEEAFEDNSEEYI K V I F R A 0 1 1 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 2 0 0 9 0 1103.5798 P55060 P55060 347 355 CSE1L Exportin-2 yes yes 2 0.030614 82.75 By MS/MS 4.5 0.5 1 1 2 5084900 5084900 0 15087 1025 16002 38365;38366 27064 27064 798 1 145130 0 VIVTGSSDSTVR TGHTGSVLCLQYDERVIVTGSSDSTVRVWD DERVIVTGSSDSTVRVWDVNTGEVLNTLIH R V I V R V 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 3 2 0 0 3 0 0 12 0 1219.6408 Q9UKB1 Q9UKB1 292 303 FBXW11 F-box/WD repeat-containing protein 11 yes yes 2 0.00061292 142 By MS/MS 1 0 1 1 0 0 0 15088 2810 16003 38367 27065 27065 1 0 0 VIWLQSVR LLVSVLEQGLPPSHRVIWLQSVRILSRDRN GLPPSHRVIWLQSVRILSRDRNCLDPFTSR R V I V R I 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 1 0 2 0 0 8 0 999.58655 Q9NPQ8 Q9NPQ8 64 71 RIC8A Synembryn-A yes yes 2 0.0072772 128.61 By MS/MS 5.5 0.5 1 1 2 1423200 1423200 0 15089 2584 16004 38368;38369 27066 27066 1 31145 0 VKADQDSEAMKR KQVAASTAQLLVACKVKADQDSEAMKRLQA ACKVKADQDSEAMKRLQAAGNAVKRASDNL K V K K R L 2 1 0 2 0 1 1 0 0 0 0 2 1 0 0 1 0 0 0 1 0 0 12 2 1376.6718 Q9Y490 Q9Y490 2444 2455 TLN1 Talin-1 yes yes 3 0.031973 79.492 By MS/MS 2 0 1 1 60428 60428 0 15090 2947 16005 38370 27067 27067 1698 1 3003.6 0 VKDASPNQVAEK DHSYVIAGYYQANERVKDASPNQVAEKVAS NERVKDASPNQVAEKVASRIAEGFSDTALI R V K E K V 2 0 1 1 0 1 1 0 0 0 0 2 0 0 1 1 0 0 0 2 0 0 12 1 1284.6674 O43402 O43402 99 110 EMC8 ER membrane protein complex subunit 8 yes yes 2;3 0.00074822 139.76 By MS/MS 9.33 0.471 2 1 3 523310 523310 0 15091 198 16006 38371;38372;38373 27068;27069 27068 2 311540 0 VKDDIESLHDK IRGAIREYQTQLIQRVKDDIESLHDKFKVQ LIQRVKDDIESLHDKFKVQYPQSQACKMSH R V K D K F 0 0 0 3 0 0 1 0 1 1 1 2 0 0 0 1 0 0 0 1 0 0 11 1 1297.6514 Q14204 Q14204 612 622 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.010414 86.803 By MS/MS 1 0 1 1 412760 412760 0 15092 1421 16007 38374 27070 27070 1 20167 0 VKDDIESLHDKFK IRGAIREYQTQLIQRVKDDIESLHDKFKVQ QRVKDDIESLHDKFKVQYPQSQACKMSHVR R V K F K V 0 0 0 3 0 0 1 0 1 1 1 3 0 1 0 1 0 0 0 1 0 0 13 2 1572.8148 Q14204 Q14204 612 624 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.024183 77.204 By MS/MS 1 0 1 1 341860 341860 0 15093 1421 16008 38375 27071 27071 1 16703 0 VKDTFKEEQQK GLVDLLWDGGLKREKVKDTFKEEQQKLYSK KREKVKDTFKEEQQKLYSKMIVGNHKDRSR K V K Q K L 0 0 0 1 0 2 2 0 0 0 0 3 0 1 0 0 1 0 0 1 0 0 11 2 1378.7092 Q86UL3 Q86UL3 430 440 AGPAT6 Glycerol-3-phosphate acyltransferase 4 yes yes 3 0.013327 101.71 By MS/MS 1.5 0.5 1 1 2 628870 628870 0 15094 1822 16009 38376;38377 27072 27072 1 30808 0 VKEDPDGEHARR AEVLNKHSLSGRPLKVKEDPDGEHARRAMQ PLKVKEDPDGEHARRAMQKVMATTGGMGMG K V K R R A 1 2 0 2 0 0 2 1 1 0 0 1 0 0 1 0 0 0 0 1 0 0 12 2 1407.6855 P52272 P52272 144 155 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 3 0.016125 82.505 By MS/MS 5.5 0.5 1 1 2 413840 413840 0 15095 982 16010 38378;38379 27073 27073 1 13307 0 VKEEESLENISSVK ARHLLPCVIHAAVLKVKEEESLENISSVKK KVKEEESLENISSVKKIIKQIISHSSKVLH K V K V K K 0 0 1 0 0 0 4 0 0 1 1 2 0 0 0 3 0 0 0 2 0 0 14 1 1589.8148 Q15042 Q15042 792 805 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 7.3635E-05 192.4 By MS/MS 3.5 0.5 1 1 2 1417300 1417300 0 15096 1469 16011 38380;38381 27074 27074 1 37180 0 VKEGMNIVEAMER AKTEWLDGKHVVFGKVKEGMNIVEAMERFG GKVKEGMNIVEAMERFGSRNGKTSKKITIA K V K E R F 1 1 1 0 0 0 3 1 0 1 0 1 2 0 0 0 0 0 0 2 0 0 13 1 1504.7378 P62937 P62937 132 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.0057008 134.18 By MS/MS 10 0 1 1 496360 496360 0 15097 1163 16012 38382 27075 27075 1 527580 0 VKELEVRK TMAVLQIEAEKAELRVKELEVRKLMHVRGD AEKAELRVKELEVRKLMHVRGDGPWYYYET R V K R K L 0 1 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 8 2 999.60768 O43674 O43674 151 158 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes yes 3 0.030989 93.143 By MS/MS 10 0 1 1 189760 189760 0 15098 211 16013 38383 27076 27076 1 201690 0 VKELQAEQEDR LAANLDRAKAGLLERVKELQAEQEDRALRS LLERVKELQAEQEDRALRSFKLSVTVDPKY R V K D R A 1 1 0 1 0 2 3 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 11 1 1343.6681 Q00341 Q00341 1038 1048 HDLBP Vigilin yes yes 2;3 2.1057E-06 190.57 By MS/MS 3.33 0.471 2 1 3 2043300 2043300 0 15099 1231 16014 38384;38385;38386 27077;27078 27077 2 53561 0 VKETADFK ACRAVGRGLQPKGVRVKETADFKVYTKGAG LQPKGVRVKETADFKVYTKGAGSGELKVTV R V K F K V 1 0 0 1 0 0 1 0 0 0 0 2 0 1 0 0 1 0 0 1 0 0 8 1 936.49165 P21333 P21333 497 504 FLNA Filamin-A yes yes 2;3 0.028235 128.61 By MS/MS 2.33 0.471 2 1 3 936970 936970 0 15100 648 16015 38387;38388;38389 27079;27080 27080 2 44341 0 VKKLEEVER ERAKREEELREYQERVKKLEEVERKKRQRE REYQERVKKLEEVERKKRQRELEIEERERR R V K E R K 0 1 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 9 2 1128.6503 Q14152 Q14152 848 856 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 3 0.0071351 103.88 By MS/MS 3 0.816 1 1 1 3 8290100 8290100 0 15101 1409 16016 38390;38391;38392 27081;27082 27082 2 225730 0 VKLAAVDATVNQVLASR WAAAASEVKEQTKGKVKLAAVDATVNQVLA LAAVDATVNQVLASRYGIRGFPTIKIFQKG K V K S R Y 4 1 1 1 0 1 0 0 0 0 2 1 0 0 0 1 1 0 0 4 0 0 17 1 1754.005 Q15084 Q15084 215 231 PDIA6 Protein disulfide-isomerase A6 yes yes 3 0.00012053 129.05 By MS/MS 6 0 1 1 2396000 2396000 0 15102 1478 16017 38393 27083 27083 1 18684 0 VKLDSPAGTALSPSGHTK EQVSPAAIKKTILDKVKLDSPAGTALSPSG DSPAGTALSPSGHTKLLPRSLAPAGKD___ K V K T K L 2 0 0 1 0 0 0 2 1 0 2 2 0 0 2 3 2 0 0 1 0 0 18 1 1764.937 P32322 P32322 290 307 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 2;3 6.9998E-07 156.2 By MS/MS 8 0 2 2 7881900 7881900 0 15103 764 16018 38394;38395 27084;27085 27085 2 519970 0 VKLEEQLKETVEK KADPPATEKTLLEEKVKLEEQLKETVEKYK EKVKLEEQLKETVEKYKRALADTENLRQRS K V K E K Y 0 0 0 0 0 1 4 0 0 0 2 3 0 0 0 0 1 0 0 2 0 0 13 2 1571.877 Q9HAV7 Q9HAV7 65 77 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2;3 3.7134E-25 273.24 By MS/MS 9 0 2 2 7335600 7335600 0 15104 2547 16019 38396;38397 27086;27087 27087 2 4210000 0 VKLESPTVSTLTPSSPGK EKISPAALKKTLLDRVKLESPTVSTLTPSS ESPTVSTLTPSSPGKLLTRSLALGGKKD__ R V K G K L 0 0 0 0 0 0 1 1 0 0 2 2 0 0 3 4 3 0 0 2 0 0 18 1 1826.9989 Q96C36 Q96C36 290 307 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 2;3 2.4095E-13 233.28 By MS/MS By matching 8.6 0.8 3 1 1 4 1 49083000 48999000 83730 15105 2136 16020 38398;38399;38400;38401;38402 27088;27089;27090 27089 3 3557300 714320 VKLLLQVQHASK VAAAISKTAVAPIERVKLLLQVQHASKQIT IERVKLLLQVQHASKQITADKQYKGIIDCV R V K S K Q 1 0 0 0 0 2 0 0 1 0 3 2 0 0 0 1 0 0 0 2 0 0 12 1 1362.8347 P05141;P12235;P12236 P05141 32 43 SLC25A5;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 3;4 0.00064862 130.69 By MS/MS By matching 6.43 3.5 2 3 1 1 6 1 11328000 11234000 93855 15106 469;563;562 16021 38403;38404;38405;38406;38407;38408;38409 27091;27092;27093;27094 27091 4 795170 800700 VKNSLLSLSDT QLYDTLNAWKQNLNKVKNSLLSLSDT____ NLNKVKNSLLSLSDT_______________ K V K D T - 0 0 1 1 0 0 0 0 0 0 3 1 0 0 0 3 1 0 0 1 0 0 11 1 1175.6398 Q7L2H7 Q7L2H7 364 374 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 4.2689E-21 237.44 By MS/MS 7.5 0.5 1 1 2 5084600 5084600 0 15107 1764 16022 38410;38411 27095;27096 27095 2 130740 0 VKPHDKDAK GKFRAALRDYETVVKVKPHDKDAKMKYQEC YETVVKVKPHDKDAKMKYQECNKIVKQKAF K V K A K M 1 0 0 2 0 0 0 0 1 0 0 3 0 0 1 0 0 0 0 1 0 0 9 2 1036.5665 P53041;E7EU14 P53041 125 133 PPP5C;PPP5D1 Serine/threonine-protein phosphatase 5;Protein PPP5D1 yes no 3 0.029535 83.647 By MS/MS 6.5 0.5 1 1 2 309220 309220 0 15108 997 16023 38412;38413 27097 27097 1 2509.7 0 VKQDMPPPGGYGPIDYK ______________________________ QDMPPPGGYGPIDYKRNLPRRGLSGYSMLA K V K Y K R 0 0 0 2 0 1 0 3 0 1 0 2 1 0 4 0 0 0 2 1 0 0 17 1 1860.908 Q9P0J0 Q9P0J0 6 22 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 3 0.0038675 94.973 By MS/MS 10 0 1 1 562510 562510 0 15109 2726 16024 38414 27098;27099 27099 1589 2 597890 0 VKQLAEEQK REWYPSLATMQESLRVKQLAEEQKRREREQ MQESLRVKQLAEEQKRREREQHIAECMAKM R V K Q K R 1 0 0 0 0 2 2 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 9 1 1071.5924 Q8TAE8 Q8TAE8 105 113 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 2 0.013638 129.42 By MS/MS 9 0 1 1 0 0 0 15110 1980 16025 38415 27100 27100 1 0 0 VKQLAEEQKR REWYPSLATMQESLRVKQLAEEQKRREREQ QESLRVKQLAEEQKRREREQHIAECMAKMP R V K K R R 1 1 0 0 0 2 2 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1227.6935 Q8TAE8 Q8TAE8 105 114 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 3 0.002713 110.84 By MS/MS By matching 9 0 2 1 1 280760 277390 3377.3 15111 1980 16026 38416;38417 27101 27101 1 159190 36398 VKSLNDITAK VAASVLNPYVKRSIKVKSLNDITAKERFSP KRSIKVKSLNDITAKERFSPLTTNLINLLA K V K A K E 1 0 1 1 0 0 0 0 0 1 1 2 0 0 0 1 1 0 0 1 0 0 10 1 1087.6237 P48047 P48047 89 98 ATP5O ATP synthase subunit O, mitochondrial yes yes 3 0.033007 73.781 By MS/MS 9 0 1 1 349230 349230 0 15112 900 16027 38418 27102 27102 1 200430 0 VKVEHVVSVLEK QTLTHIYNKVRTGEKVKVEHVVSVLEKKYP GEKVKVEHVVSVLEKKYPYVEVNSILGIDS K V K E K K 0 0 0 0 0 0 2 0 1 0 1 2 0 0 0 1 0 0 0 5 0 0 12 1 1364.8028 Q9NYU2 Q9NYU2 584 595 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 3 0.0042647 96.059 By MS/MS 3 0 1 1 762290 762290 0 15113 2699 16028 38419 27103 27103 1 19900 0 VKVEPSHDASK MVLFADQATPTSPIRVKVEPSHDASKVKAE SPIRVKVEPSHDASKVKAEGPGLSRTGVEL R V K S K V 1 0 0 1 0 0 1 0 1 0 0 2 0 0 1 2 0 0 0 2 0 0 11 1 1195.6197 P21333 P21333 864 874 FLNA Filamin-A yes yes 2 0.0034345 144.17 By MS/MS 2.5 0.5 1 1 2 353370 353370 0 15114 648 16029 38420;38421 27104 27104 1 15992 0 VKVETYNDESR VFQNANFRSFIFRVRVKVETYNDESRIKAT FRVRVKVETYNDESRIKATVMDVKPVDYRE R V K S R I 0 1 1 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 1 2 0 0 11 1 1338.6416 P27694 P27694 576 586 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.00037819 169.21 By MS/MS 5 0 1 1 1450800 1450800 0 15115 708 16030 38422 27105 27105 1 59633 0 VLAAVQAAR VVSDGRGLFLEGKERVLAAVQAARNANIFV LEGKERVLAAVQAARNANIFVIFVVLDNPS R V L A R N 4 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 897.5396 Q9NU22 Q9NU22 5509 5517 MDN1 Midasin yes yes 2 0.0011251 139.31 By MS/MS 1 0 1 1 311780 311780 0 15116 2635 16031 38423 27106 27106 1 15233 0 VLACGLNEFNK QCGCDGTFLLTQSGKVLACGLNEFNKLGLN QSGKVLACGLNEFNKLGLNQCMSGIINHEA K V L N K L 1 0 2 0 1 0 1 1 0 0 2 1 0 1 0 0 0 0 0 1 0 0 11 0 1263.6282 Q8TD19 Q8TD19 553 563 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.00013311 157.66 By MS/MS 4 0 1 1 1698900 1698900 0 15117 1999 16032 38424 27107 27107 1 46379 0 VLADLAIYEPK LIGNLVKCQVELNRKVLADLAIYEPKTFKS LNRKVLADLAIYEPKTFKSLAALASRRRHE K V L P K T 2 0 0 1 0 0 1 0 0 1 2 1 0 0 1 0 0 0 1 1 0 0 11 0 1230.686 Q9BYC9 Q9BYC9 101 111 MRPL20 39S ribosomal protein L20, mitochondrial yes yes 2 0.0012307 150.61 By MS/MS 9.5 0.5 1 1 2 3416500 3416500 0 15118 2411 16033 38425;38426 27108 27108 1 1976800 0 VLAEPVPLPADPMELK RRKWKLNLIAELESRVLAEPVPLPADPMEL LAEPVPLPADPMELKNLEYRPVKVRGCFDH R V L L K N 2 0 0 1 0 0 2 0 0 0 3 1 1 0 4 0 0 0 0 2 0 0 16 0 1717.9324 Q15526 Q15526 98 113 SURF1 Surfeit locus protein 1 yes yes 2 0.00031251 123.64 By MS/MS 8 0 2 2 2902500 2902500 0 15119 1507 16034;16035 38427;38428 27109;27110 27109 1161 2 191470 0 VLAGLYMGR NKAIITALGVERRNRVLAGLYMGRSDTQLV VERRNRVLAGLYMGRSDTQLVVRQASLHVW R V L G R S 1 1 0 0 0 0 0 2 0 0 2 0 1 0 0 0 0 0 1 1 0 0 9 0 978.53207 Q92616 Q92616 1885 1893 GCN1L1 Translational activator GCN1 yes yes 2 0.0010166 135.35 By MS/MS 1.5 0.5 1 1 2 2756600 2756600 0 15120 2068 16036 38429;38430 27111 27111 1355 1 136900 0 VLAGVLDSVDVR YVPKVACSNWKRVMKVLAGVLDSVDVRLKM VMKVLAGVLDSVDVRLKMDHRSDLVFLADL K V L V R L 1 1 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 4 0 0 12 0 1241.698 Q8NCH0 Q8NCH0 168 179 CHST14 Carbohydrate sulfotransferase 14 yes yes 2 0.00042788 141.95 By MS/MS 5.5 1.12 1 1 1 1 4 2705100 2705100 0 15121 1953 16037 38431;38432;38433;38434 27112 27112 1 57236 0 VLAIAQNFV PIPTSLRKREGEYSKVLAIAQNFV______ EGEYSKVLAIAQNFV_______________ K V L F V - 2 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 9 0 973.55967 Q6P1L8 Q6P1L8 137 145 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 5.3022E-05 187.14 By MS/MS 10 0 1 1 1903800 1903800 0 15122 1700 16038 38435 27113 27113 1 2023500 0 VLAIGDEKDQTR LEIPDTLQELFARYRVLAIGDEKDQTRKED RYRVLAIGDEKDQTRKEDELNSVDDIHFLV R V L T R K 1 1 0 2 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 12 1 1343.7045 Q12789 Q12789 1402 1413 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.046273 76.165 By MS/MS 1.5 0.5 1 1 2 380750 380750 0 15123 1306 16039 38436;38437 27114 27114 1 18886 0 VLAINILGR TVLTIMDIKSESGLRVLAINILGRFLLNND SESGLRVLAINILGRFLLNNDKNIRYVALT R V L G R F 1 1 1 0 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 967.61785 O43747 O43747 307 315 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.0022502 127.12 By MS/MS 4 0 1 1 206460 206460 0 15124 219 16040 38438 27115 27115 1 5636.1 0 VLALTETCLVER VVQKISPRHSEPVKRVLALTETCLVERDPA VKRVLALTETCLVERDPATYNIATLKPLGE R V L E R D 1 1 0 0 1 0 2 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 12 0 1402.749 O75165 O75165 254 265 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 3.7195E-11 206.73 By MS/MS 2 0 1 1 388750 388750 0 15125 287 16041 38439 27116 27116 1 19323 0 VLANNSLSFEK GSFKEALNVINTHTKVLANNSLSFEKAYCE THTKVLANNSLSFEKAYCEYRLNRIENALK K V L E K A 1 0 2 0 0 0 1 0 0 0 2 1 0 1 0 2 0 0 0 1 0 0 11 0 1220.6401 O76094 O76094 74 84 SRP72 Signal recognition particle subunit SRP72 yes yes 2 8.1235E-05 164.66 By MS/MS By matching 5 0 2 1 1 13396000 13379000 16708 15126 346 16042 38440;38441 27117 27117 1 549950 49438 VLANPGNSQVAR AAVENLPTFLVELSRVLANPGNSQVARVAA LSRVLANPGNSQVARVAAGLQIKNSLTSKD R V L A R V 2 1 2 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 12 0 1224.6575 Q14974 Q14974 43 54 KPNB1 Importin subunit beta-1 yes yes 2 1.6222E-07 203.02 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 17420000 17420000 0 15127 1452 16043 38442;38443;38444;38445;38446;38447;38448;38449;38450;38451 27118;27119;27120;27121 27119 4 637260 0 VLANQYK CDLVSDFDGFSERFKVLANQYKSIYPTLEI DGFSERFKVLANQYKSIYPTLEIDIEGELQ K V L Y K S 1 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 7 0 834.45995 P30520 P30520 197 203 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 0.025513 118.06 By MS/MS 7 0 1 1 2160200 2160200 0 15128 742 16044 38452 27122 27122 1 38604 0 VLAQNSGFDLQETLVK LGVQAFADALLIIPKVLAQNSGFDLQETLV LAQNSGFDLQETLVKIQAEHSESGQLVGVD K V L V K I 1 0 1 1 0 2 1 1 0 0 3 1 0 1 0 1 1 0 0 2 0 0 16 0 1760.9309 P40227 P40227 450 465 CCT6A T-complex protein 1 subunit zeta yes yes 2;3 1.506E-38 292.76 By MS/MS By MS/MS 5.6 2.24 1 1 1 1 1 6 1 1 2 14 1 565850000 565800000 53353 15129 828 16045 38453;38454;38455;38456;38457;38458;38459;38460;38461;38462;38463;38464;38465;38466;38467 27123;27124;27125;27126;27127;27128;27129;27130;27131;27132;27133;27134;27135;27136;27137 27133 15 10243000 163630 VLAQQGEYSEAIPILR EHQPDNIKALFRKGKVLAQQGEYSEAIPIL LAQQGEYSEAIPILRAALKLEPSNKTIHAE K V L L R A 2 1 0 0 0 2 2 1 0 2 2 0 0 0 1 1 0 0 1 1 0 0 16 0 1785.9625 Q14318 Q14318 315 330 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 2 3.6999E-08 174.21 By MS/MS 6.5 2.29 1 1 1 1 1 1 1 1 8 28278000 28278000 0 15130 1428 16046 38468;38469;38470;38471;38472;38473;38474;38475 27138;27139;27140;27141 27138 4 415800 0 VLATAFDTTLGGR AYQVSVCAFNRGKLKVLATAFDTTLGGRKF LKVLATAFDTTLGGRKFDEVLVNHFCEEFG K V L G R K 2 1 0 1 0 0 0 2 0 0 2 0 0 1 0 0 3 0 0 1 0 0 13 0 1320.7038 P34932 P34932 222 234 HSPA4 Heat shock 70 kDa protein 4 yes yes 2 2.417E-25 284.62 By MS/MS 4 0 1 1 2266500 2266500 0 15131 778 16047 38476 27142 27142 1 61872 0 VLATQPGPGR GDEPLNFLDPKVAQRVLATQPGPGRGRKKD KVAQRVLATQPGPGRGRKKDHGFKVSADGR R V L G R G 1 1 0 0 0 1 0 2 0 0 1 0 0 0 2 0 1 0 0 1 0 0 10 0 994.55598 Q5JTH9 Q5JTH9 1129 1138 RRP12 RRP12-like protein yes yes 2 0.011837 105.52 By MS/MS 3 0 1 1 289920 289920 0 15132 1609 16048 38477 27143 27143 1 7568.5 0 VLATTFDPYLGGR AYQVLVCAFNKGKLKVLATTFDPYLGGRNF LKVLATTFDPYLGGRNFDEALVDYFCDEFK K V L G R N 1 1 0 1 0 0 0 2 0 0 2 0 0 1 1 0 2 0 1 1 0 0 13 0 1408.7351 O95757 O95757 222 234 HSPA4L Heat shock 70 kDa protein 4L yes yes 2 5.4615E-05 157.78 By MS/MS 4 0 1 1 792180 792180 0 15133 405 16049 38478 27144 27144 1 21626 0 VLCELADLQDK ATILKLLEVEHPAAKVLCELADLQDKEVGD PAAKVLCELADLQDKEVGDGTTSVVIIAAE K V L D K E 1 0 0 2 1 1 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1302.649 P17987 P17987 74 84 TCP1 T-complex protein 1 subunit alpha yes yes 2 1.178E-07 193.52 By MS/MS By MS/MS 5.33 2.98 1 2 1 2 1 1 1 8 1 19279000 19203000 76201 15134 619 16050 38479;38480;38481;38482;38483;38484;38485;38486;38487 27145;27146;27147;27148;27149;27150;27151;27152 27151 8 1173600 233700 VLCNEAGLCALR QLANSAHGYVGADLKVLCNEAGLCALRRIL DLKVLCNEAGLCALRRILKKQPNLPDVKVA K V L L R R 2 1 1 0 2 0 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 12 0 1374.6748 Q8NB90 Q8NB90 566 577 SPATA5 Spermatogenesis-associated protein 5 yes yes 2 4.3671E-07 182.64 By MS/MS 4 0 1 1 1347000 1347000 0 15135 1939 16051 38488 27153 27153 1 36772 0 VLCQGLK ELTVSNNDINEAGVRVLCQGLKDSPCQLEA DINEAGVRVLCQGLKDSPCQLEALKLESCG R V L L K D 0 0 0 0 1 1 0 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 7 0 816.45276 P13489 P13489 189 195 RNH1 Ribonuclease inhibitor yes yes 2 0.015981 137.44 By MS/MS 7 0 1 1 1984600 1984600 0 15136 574 16052 38489 27154 27154 1 35465 0 VLCSYDYR VTPGGFDQINPATNRVLCSYDYRNIEGFVD INPATNRVLCSYDYRNIEGFVDLSDYQGGF R V L Y R N 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 2 1 0 0 8 0 1074.4804 O75165 O75165 147 154 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.011773 117.4 By MS/MS 2 0 1 1 298830 298830 0 15137 287 16053 38490 27155 27155 1 14853 0 VLCYYGSQEER DNWLREVNLWCPTLKVLCYYGSQEERKQIR PTLKVLCYYGSQEERKQIRFNIHSRYEDYN K V L E R K 0 1 0 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 2 1 0 0 11 0 1402.6187 Q9H4L7 Q9H4L7 573 583 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 8.8015E-05 163.64 By MS/MS 3.5 0.5 1 1 2 1679900 1679900 0 15138 2502 16054 38491;38492 27156 27156 1 44090 0 VLDAIIQEK EEAKSSLAMNRSRGKVLDAIIQEKKSGRIP NRSRGKVLDAIIQEKKSGRIPGIYGRLGDL K V L E K K 1 0 0 1 0 1 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1027.5914 Q9NTJ3 Q9NTJ3 599 607 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 0.0029845 120.12 By MS/MS 3.5 0.5 1 1 2 3011900 3011900 0 15139 2630 16055 38493;38494 27157 27157 1 78829 0 VLDALVAR LQSRLAALGRQVGARVLDALVAREKGARRE GRQVGARVLDALVAREKGARRETKVLGALL R V L A R E 2 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 8 0 855.5178 Q8IUR0 Q8IUR0 65 72 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 2 0.0090507 121.99 By MS/MS By matching 8.5 1.12 1 1 1 1 3 1 1729900 1681000 48946 15140 1853 16056 38495;38496;38497;38498 27158 27158 1 962040 200930 VLDASWYSPGTR LAESIRTGKLGPGLRVLDASWYSPGTREAR GLRVLDASWYSPGTREARKEYLERHVPGAS R V L T R E 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 2 1 1 1 1 0 0 12 0 1350.6568 Q16762 Q16762 31 42 TST Thiosulfate sulfurtransferase yes yes 2 0.0073375 99.973 By MS/MS 8 0 1 1 835500 835500 0 15141 1546 16057 38499 27159 27159 1 55117 0 VLDDGELLVQQTK YIMNGIIKWGDPVTRVLDDGELLVQQTKNS TRVLDDGELLVQQTKNSDRTPLVSVLLEGP R V L T K N 0 0 0 2 0 2 1 1 0 0 3 1 0 0 0 0 1 0 0 2 0 0 13 0 1456.7773 P46459 P46459 517 529 NSF Vesicle-fusing ATPase yes yes 2 3.249E-25 237.68 By MS/MS By MS/MS 5.29 2.76 1 1 2 1 1 1 6 1 34243000 34146000 96958 15142 881 16058 38500;38501;38502;38503;38504;38505;38506 27160;27161;27162;27163;27164;27165;27166 27164 7 1770000 286900 VLDEEEYIEGLQTVIQR KREAGEAGAATSKQRVLDEEEYIEGLQTVI DEEEYIEGLQTVIQRDFFPDVEKLQAQKEY R V L Q R D 0 1 0 1 0 2 4 1 0 2 2 0 0 0 0 0 1 0 1 2 0 0 17 0 2033.0317 Q96DF8 Q96DF8 37 53 DGCR14 Protein DGCR14 yes yes 2 3.754E-56 288.61 By MS/MS 6 0 1 1 1045500 1045500 0 15143 2150 16059 38507 27167 27167 1 8152.9 0 VLDELTLAR NLRMSVEADINGLRRVLDELTLARADLEMQ INGLRRVLDELTLARADLEMQIESLKEELA R V L A R A 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1028.5866 CON__P02533;P02533;CON__Q6IFX2;CON__P19012;CON__A2A4G1;P19012;CON__P08727;CON__P19001;P08727;CON__P08779;P08779;CON__Q04695;Q04695;CON__Q9QWL7 CON__P02533 224 232 KRT14;KRT15;KRT19;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 2 0.00063366 168.27 By MS/MS By MS/MS 5.67 2.82 2 2 1 2 2 2 1 1 2 7 8 7271300 3781500 3489700 + 15144 35;47;54 16060 38508;38509;38510;38511;38512;38513;38514;38515;38516;38517;38518;38519;38520;38521;38522 27168;27169;27170;27171;27172;27173;27174;27175;27176;27177;27178;27179;27180 27176 13 1357900 10419000 VLDELTLTK ALRQSVEADINGLRRVLDELTLTKADLEMQ INGLRRVLDELTLTKADLEMQIESLTEELA R V L T K A 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 9 0 1030.591 CON__P13645;P13645 CON__P13645 258 266 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.00023565 161.79 By MS/MS By MS/MS 5.12 2.69 2 1 2 2 2 2 1 2 1 1 8 8 21564000 14046000 7518500 + 15145 49 16061 38523;38524;38525;38526;38527;38528;38529;38530;38531;38532;38533;38534;38535;38536;38537;38538 27181;27182;27183;27184;27185;27186;27187;27188;27189;27190;27191;27192;27193;27194;27195 27190 15 2434900 18979000 VLDLDLFR ______________________________ ______________________________ M V L F R V 0 1 0 2 0 0 0 0 0 0 3 0 0 1 0 0 0 0 0 1 0 0 8 0 989.55458 P49591 P49591 2 9 SARS Serine--tRNA ligase, cytoplasmic yes yes 2 0.001859 159.04 By MS/MS 6 0 1 1 1198200 1198200 0 15146 922 16062 38539 27196 27196 1 9343.4 0 VLDLLDPASGDLVIR ALSVTMSYLEIYQEKVLDLLDPASGDLVIR VLDLLDPASGDLVIREDCRGNILIPGLSQK K V L I R E 1 1 0 3 0 0 0 1 0 1 4 0 0 0 1 1 0 0 0 2 0 0 15 0 1594.893 Q14807 Q14807 184 198 KIF22 Kinesin-like protein KIF22 yes yes 2 0.0047944 105.17 By MS/MS 5 0 1 1 94225 94225 0 15147 1448 16063 38540 27197 27197 1 3873 0 VLDLQADSR VPQMKEPIEDLSPDRVLDLQADSRLHVIFG DLSPDRVLDLQADSRLHVIFGGTKVVQHIP R V L S R L 1 1 0 2 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 1015.5298 Q9HD20 Q9HD20 372 380 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.0019963 129.85 By MS/MS By matching 1.33 0.471 2 1 2 1 484690 462160 22532 15148 2566 16064 38541;38542;38543 27198;27199 27198 2 22580 22532 VLDLQQIK DEVDKRVHMTWVQPRVLDLQQIKGMKDRLE MTWVQPRVLDLQQIKGMKDRLEFWCTDVKS R V L I K G 0 0 0 1 0 2 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 955.57023 Q9UNM6 Q9UNM6 340 347 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 2 0.0038151 143.89 By MS/MS 7 0 1 1 18874000 18874000 0 15149 2845 16065 38544 27200 27200 1 337290 0 VLDLVEVLVTK KLQKEKALRRDFQIRVLDLVEVLVTKQPEN FQIRVLDLVEVLVTKQPENALVLELLEPLL R V L T K Q 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 1 0 0 4 0 0 11 0 1226.7486 Q9BQG0 Q9BQG0 828 838 MYBBP1A Myb-binding protein 1A yes yes 2 0.00038541 147.4 By MS/MS 3.5 0.5 1 1 2 101000 101000 0 15150 2317 16066 38545;38546 27201;27202 27201 2 2665.7 0 VLDQKPSQK TPSTTTSSHYLGTLKVLDQKPSQKQSIEPD YLGTLKVLDQKPSQKQSIEPDRADNIRAAV K V L Q K Q 0 0 0 1 0 2 0 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 9 1 1041.5819 Q49MG5 Q49MG5 405 413 MAP9 Microtubule-associated protein 9 yes yes 2 0.013605 113.66 By MS/MS 4 0 1 1 150390 150390 0 15151 1574 16067 38547 27203 27203 1 4105.6 0 VLDSGAPIKIPVGPETLGR TIAMDGTEGLVRGQKVLDSGAPIKIPVGPE GAPIKIPVGPETLGRIMNVIGEPIDERGPI K V L G R I 1 1 0 1 0 0 1 3 0 2 2 1 0 0 3 1 1 0 0 2 0 0 19 1 1918.0888 P06576 P06576 125 143 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2;3 1.8093E-11 159.64 By MS/MS 7 0.816 2 2 2 6 201630000 201630000 0 15152 478 16068 38548;38549;38550;38551;38552;38553 27204;27205;27206;27207 27204 4 1709000 0 VLDTNDRFLR FARLDIDPETITWQRVLDTNDRFLRKITIG ITWQRVLDTNDRFLRKITIGQAPTEKGHTR R V L L R K 0 2 1 2 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 0 10 1 1247.6622 Q6UB35;P11586 P11586 533 542 MTHFD1L;MTHFD1 Monofunctional C1-tetrahydrofolate synthase, mitochondrial;C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed no no 2 0.036391 107.69 By MS/MS By matching 4 0 2 1 1 3413300 3348000 65303 15153 556;1726 16069 38554;38555 27208 27208 1 91397 136460 VLDVGFVGR RCRYLQPRWTDFPGRVLDVGFVGRWWVLGA TDFPGRVLDVGFVGRWWVLGAWMRDCDIND R V L G R W 0 1 0 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 3 0 0 9 0 960.53927 Q9BSF4 Q9BSF4 163 171 C19orf52 Uncharacterized protein C19orf52 yes yes 2 0.0015359 134.81 By MS/MS 8.5 1.12 1 1 1 1 4 10744000 10744000 0 15154 2336 16070 38556;38557;38558;38559 27209 27209 1 1061700 0 VLDWICR EAGHFLWPGFGENARVLDWICRRLEGEDSA PGFGENARVLDWICRRLEGEDSARETPIGL R V L C R R 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 7 0 960.48512 Q16822 Q16822 554 560 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.022864 119.89 By MS/MS 5.5 0.5 1 1 2 3660200 3660200 0 15155 1550 16071 38560;38561 27210;27211 27211 2 64612 0 VLEAAAQAAR LLEMDARLHEDHLERVLEAAAQAARDVHTL DHLERVLEAAAQAARDVHTLLDRVVRQHVR R V L A R D 5 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 998.55089 Q9NPD3 Q9NPD3 213 222 EXOSC4 Exosome complex component RRP41 yes yes 2 0.00025506 154.56 By MS/MS 8 0 1 1 913380 913380 0 15156 2581 16072 38562 27212 27212 1 60255 0 VLEALLPLK ICFFVQQFTDMEHNRVLEALLPLKGLEERV DMEHNRVLEALLPLKGLEERVAAAVDLIIK R V L L K G 1 0 0 0 0 0 1 0 0 0 4 1 0 0 1 0 0 0 0 1 0 0 9 0 994.64267 P49327 P49327 2383 2391 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00084371 145.63 By MS/MS 5.5 2.87 1 1 1 1 1 1 1 1 1 1 10 4172000 4172000 0 15157 915 16073 38563;38564;38565;38566;38567;38568;38569;38570;38571;38572 27213;27214;27215;27216;27217;27218;27219;27220;27221 27215 9 212820 0 VLEALLPLKGLEER ICFFVQQFTDMEHNRVLEALLPLKGLEERV RVLEALLPLKGLEERVAAAVDLIIKSHQGL R V L E R V 1 1 0 0 0 0 3 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 14 1 1578.9345 P49327 P49327 2383 2396 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.0064745 88.092 By MS/MS 5 1.41 1 1 1 1 1 5 1677200 1677200 0 15158 915 16074 38573;38574;38575;38576;38577 27222;27223;27224 27223 3 35516 0 VLEALQVLR LLLQQKYLEYLEDGKVLEALQVLRCELTPL YLEDGKVLEALQVLRCELTPLKYNTERIHV K V L L R C 1 1 0 0 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 9 0 1039.639 Q9H7D7 Q9H7D7 229 237 WDR26 WD repeat-containing protein 26 yes yes 2 0.001869 131.22 By MS/MS 4.5 0.5 1 1 2 935170 935170 0 15159 2515 16075 38578;38579 27225 27225 1 37405 0 VLEANEMLIK V L I K 1 0 1 0 0 0 2 0 0 1 2 1 1 0 0 0 0 0 0 1 0 0 10 0 1158.6318 REV__Q9Y2D8 yes yes 2 0.01827 87.696 By MS/MS By MS/MS 4 2.94 1 1 1 2 1 1951700 1784800 166850 + 15160 3051 16076 38580;38581;38582 27226;27227;27228 27226 1751 3 68817 1423400 VLEAVSANPGR PMWAEPIHDLDFVGRVLEAVSANPGRFHTS FVGRVLEAVSANPGRFHTSERIRGVLSVIT R V L G R F 2 1 1 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1111.5986 Q9NXH9 Q9NXH9 411 421 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 0.0017398 123.75 By MS/MS 5 0 1 1 682950 682950 0 15161 2688 16077 38583 27229 27229 1 28072 0 VLEDEFPEVYR MGGGTGSGLGTFLLKVLEDEFPEVYRFVTS FLLKVLEDEFPEVYRFVTSIYPSGEDDVIT K V L Y R F 0 1 0 1 0 0 3 0 0 0 1 0 0 1 1 0 0 0 1 2 0 0 11 0 1394.6718 Q9UJT0 Q9UJT0 162 172 TUBE1 Tubulin epsilon chain yes yes 2 0.001402 128.27 By MS/MS 7 0 1 1 980380 980380 0 15162 2799 16078 38584 27230 27230 1 17520 0 VLEDSDLK LNMDLFRSTMKPVQKVLEDSDLKKSDIDEI TMKPVQKVLEDSDLKKSDIDEIVLVGGSTR K V L L K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 0 917.47058 P11021 P11021 345 352 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0086842 127.12 By MS/MS 5 0 1 1 0 0 0 15163 545 16079 38585 27231 27231 1 0 0 VLEDSDLKK LNMDLFRSTMKPVQKVLEDSDLKKSDIDEI MKPVQKVLEDSDLKKSDIDEIVLVGGSTRI K V L K K S 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 9 1 1045.5655 P11021 P11021 345 353 HSPA5 78 kDa glucose-regulated protein yes yes 2;3 0.0035261 144.12 By MS/MS By matching 5.25 0.433 3 1 3 1 10227000 10187000 39985 15164 545 16080 38586;38587;38588;38589 27232;27233 27232 2 392360 118310 VLEDSDLKKSDIDEIVLVGGSTR LNMDLFRSTMKPVQKVLEDSDLKKSDIDEI KSDIDEIVLVGGSTRIPKIQQLVKEFFNGK K V L T R I 0 1 0 4 0 0 2 2 0 2 3 2 0 0 0 3 1 0 0 3 0 0 23 2 2487.3068 P11021 P11021 345 367 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.0025761 74.561 By MS/MS 5 0 1 1 2279000 2279000 0 15165 545 16081 38590 27234 27234 1 93678 0 VLEEALLSR TGGAEGTGDAVLGEKVLEEALLSREHVLEL AVLGEKVLEEALLSREHVLELENSKGPSLA K V L S R E 1 1 0 0 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 9 0 1028.5866 Q92667 Q92667 214 222 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 0.0029977 131.44 By MS/MS 3 0 1 1 1063900 1063900 0 15166 2074 16082 38591 27235 27235 1 27773 0 VLEEANQAINPK FFTPGNLKQARELIKVLEEANQAINPKLMQ LIKVLEEANQAINPKLMQLVDHRGGGGGGG K V L P K L 2 0 2 0 0 1 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 12 0 1324.6987 Q92841 Q92841 536 547 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 0.0017593 124.67 By MS/MS By matching 5 0 2 1 1 2585400 2563200 22183 15167 2082 16083 38592;38593 27236 27236 1 105360 65639 VLEEDESIR ATTVSSPSAAITVQRVLEEDESIRTCLSED AITVQRVLEEDESIRTCLSEDAKEIQNKIE R V L I R T 0 1 0 1 0 0 3 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1088.535 O43432 O43432 451 459 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 2 0.00091248 144.09 By MS/MS 2 0 1 1 733980 733980 0 15168 200 16084 38594 27237 27237 1 36483 0 VLEEEENKPNPVTQR SREGRPIWQLSHFARVLEEEENKPNPVTQR VLEEEENKPNPVTQRVKMIMSLGLVLVHAH R V L Q R V 0 1 2 0 0 1 4 0 0 0 1 1 0 0 2 0 1 0 0 2 0 0 15 1 1780.8955 P04035 P04035 241 255 HMGCR 3-hydroxy-3-methylglutaryl-coenzyme A reductase yes yes 3 0.04316 58.885 By MS/MS 1.5 0.5 1 1 2 343740 343740 0 15169 441 16085 38595;38596 27238 27238 1 16853 0 VLEEGGFFEEK HAYHPEEFVCSQCGKVLEEGGFFEEKGAIF QCGKVLEEGGFFEEKGAIFCPPCYDVRYAP K V L E K G 0 0 0 0 0 0 4 2 0 0 1 1 0 2 0 0 0 0 0 1 0 0 11 0 1282.6081 Q9NR12 Q9NR12 314 324 PDLIM7 PDZ and LIM domain protein 7 yes yes 2 9.0828E-11 204.34 By MS/MS 7 0.816 1 1 1 3 2538100 2538100 0 15170 2597 16086 38597;38598;38599 27239 27239 1 31797 0 VLEELEGVR LLSKLFPKIPPHSLRVLEELEGVRRRSFND PPHSLRVLEELEGVRRRSFNDFRSILPSNL R V L V R R 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 0 0 0 0 2 0 0 9 0 1042.5659 P42356 P42356 219 227 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0019131 130.75 By MS/MS 2.5 0.5 1 1 2 856910 856910 0 15171 850 16087 38600;38601 27240 27240 1 28935 0 VLEEVDWLITK AAPTVCLLVLSQAEKVLEEVDWLITKLKGQ QAEKVLEEVDWLITKLKGQVSQETLSEEAS K V L T K L 0 0 0 1 0 0 2 0 0 1 2 1 0 0 0 0 1 1 0 2 0 0 11 0 1343.7337 Q9NVI1 Q9NVI1 1095 1105 FANCI Fanconi anemia group I protein yes yes 2 0.00056014 140.3 By MS/MS 3 0 1 1 448680 448680 0 15172 2654 16088 38602 27241 27241 1 11713 0 VLEEYGAGVCSTR GFARNTGSCQEAAAKVLEEYGAGVCSTRQE AKVLEEYGAGVCSTRQEIGNLDKHEELEEL K V L T R Q 1 1 0 0 1 0 2 2 0 0 1 0 0 0 0 1 1 0 1 2 0 0 13 0 1439.6715 O15270 O15270 195 207 SPTLC2 Serine palmitoyltransferase 2 yes yes 2 0.00092365 160.67 By MS/MS 6.5 0.5 1 1 2 8711800 8711800 0 15173 166 16089 38603;38604 27242 27242 1 70822 0 VLEGMEVVR VKTAWLDGKHVVFGKVLEGMEVVRKVESTK HVVFGKVLEGMEVVRKVESTKTDSRDKPLK K V L V R K 0 1 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 3 0 0 9 0 1030.5481 P23284 P23284 172 180 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0014448 135.79 By MS/MS 9 0 1 1 1171000 1171000 0 15174 667 16090 38605 27243 27243 1 672070 0 VLEGNEQFINAAK YKTRIQVRLGEHNIKVLEGNEQFINAAKII IKVLEGNEQFINAAKIIRHPKYNRDTLDND K V L A K I 2 0 2 0 0 1 2 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 13 0 1431.7358 P35030 P35030 137 149 PRSS3 Trypsin-3 yes yes 2 2.2285E-18 231.05 By MS/MS By MS/MS 5.2 3.04 2 2 2 1 1 1 1 2 2 1 6 9 6552100 2684400 3867700 15175 779 16091 38606;38607;38608;38609;38610;38611;38612;38613;38614;38615;38616;38617;38618;38619;38620 27244;27245;27246;27247;27248;27249;27250;27251;27252;27253;27254;27255 27255 12 873880 13746000 VLEHQLLQTTK ______________________________ MFSKVLEHQLLQTTKLVEEHLDSEIQKLDQ K V L T K L 0 0 0 0 0 2 1 0 1 0 3 1 0 0 0 0 2 0 0 1 0 0 11 0 1308.7402 O14530 O14530 13 23 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 2 0.0060954 115 By MS/MS 8.5 0.5 1 1 2 4112000 4112000 0 15176 112 16092 38621;38622 27256 27256 1 319510 0 VLEKVDVEQK DQDGDSAISFTEFVKVLEKVDVEQKMSIRF TEFVKVLEKVDVEQKMSIRFLH________ K V L Q K M 0 0 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 0 0 3 0 0 10 1 1185.6605 Q99653 Q99653 179 188 CHP1 Calcineurin B homologous protein 1 yes yes 3 0.0039886 109.16 By MS/MS 9 0 1 1 0 0 0 15177 2281 16093 38623 27257 27257 1 0 0 VLELDNVK MVRRAAASKLGEFAKVLELDNVKSEIIPMF KLGEFAKVLELDNVKSEIIPMFSNLASDEQ K V L V K S 0 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 8 0 928.52295 P30153 P30153 195 202 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 2 0.020312 106.36 By MS/MS 6 0 1 1 1845500 1845500 0 15178 737 16094 38624 27258 27258 1 14392 0 VLELDPALAPVVSR AAVWNAQEAQADFAKVLELDPALAPVVSRE KVLELDPALAPVVSRELQALEARIRQKDEE K V L S R E 2 1 0 1 0 0 1 0 0 0 3 0 0 0 2 1 0 0 0 3 0 0 14 0 1477.8504 O00170 O00170 291 304 AIP AH receptor-interacting protein yes yes 2 0.00085942 126.12 By MS/MS 8.5 1.12 1 1 1 1 4 6937900 6937900 0 15179 74 16095 38625;38626;38627;38628 27259;27260 27259 2 524560 0 VLELEPNNFEATNELR FALQKLEEAKKDYERVLELEPNNFEATNEL LELEPNNFEATNELRKISQALASKENSYPK R V L L R K 1 1 3 0 0 0 4 0 0 0 3 0 0 1 1 0 1 0 0 1 0 0 16 0 1886.9374 Q9H6T3 Q9H6T3 227 242 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.007703 121.24 By MS/MS 6 0.816 1 1 1 3 2844500 2844500 0 15180 2512 16096 38629;38630;38631 27261 27261 1 81221 0 VLELEPNNFEATNELRK FALQKLEEAKKDYERVLELEPNNFEATNEL ELEPNNFEATNELRKISQALASKENSYPKE R V L R K I 1 1 3 0 0 0 4 0 0 0 3 1 0 1 1 0 1 0 0 1 0 0 17 1 2015.0324 Q9H6T3 Q9H6T3 227 243 RPAP3 RNA polymerase II-associated protein 3 yes yes 3 0.026424 66.246 By MS/MS 5 0 1 1 4450600 4450600 0 15181 2512 16097 38632 27262 27262 1 182940 0 VLELQGLGWEGQEAEK PTEILSSCLTMPKLRVLELQGLGWEGQEAE LELQGLGWEGQEAEKILCKGLPHCMVIVRA R V L E K I 1 0 0 0 0 2 4 3 0 0 3 1 0 0 0 0 0 1 0 1 0 0 16 0 1784.8945 Q9NXK8 Q9NXK8 286 301 FBXL12 F-box/LRR-repeat protein 12 yes yes 2 0.0072074 105.17 By MS/MS 8 0 1 1 0 0 0 15182 2689 16098 38633 27263 27263 1 0 0 VLELVLR EVMRQRGINMRYLGKVLELVLRSPARHQLD INMRYLGKVLELVLRSPARHQLDHVFKIGI K V L L R S 0 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 7 0 840.54329 O75153;Q9Y5I4 O75153 792 798 CLUH;PCDHAC2 Clustered mitochondria protein homolog;Protocadherin alpha-C2 yes no 2 0.043839 105.39 By MS/MS 3 0 1 1 477010 477010 0 15183 285 16099 38634 27264 27264 1 12452 0 VLELVSITANK VDLRPKGLDGARAERVLELVSITANKNTCP RAERVLELVSITANKNTCPGDRSAITPGGL R V L N K N 1 0 1 0 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 2 0 0 11 0 1185.6969 P34897 P34897 399 409 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2 0.035037 80.688 By matching By MS/MS 6.33 0.471 2 1 2 1 10514000 10482000 31932 15184 777 16100 38635;38636;38637 27265 27265 1 85963 97935 VLELVSITANKNTCPGDR VDLRPKGLDGARAERVLELVSITANKNTCP LVSITANKNTCPGDRSAITPGGLRLGAPAL R V L D R S 1 1 2 1 1 0 1 1 0 1 2 1 0 0 1 1 2 0 0 2 0 0 18 1 1986.0204 P34897 P34897 399 416 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 2;3 8.0991E-07 179.5 By MS/MS 6 0 2 2 7982800 7982800 0 15185 777 16101 38638;38639 27266;27267 27266 2 62250 0 VLENAEGAR TTNSCVAVMEGKQAKVLENAEGARTTPSVV EGKQAKVLENAEGARTTPSVVAFTADGERL K V L A R T 2 1 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 957.48796 P38646 P38646 77 85 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.00011812 169.44 By MS/MS By MS/MS 6.88 2.15 1 2 1 1 1 2 5 3 81168000 80295000 873160 15186 820 16102 38640;38641;38642;38643;38644;38645;38646;38647 27268;27269;27270;27271;27272;27273 27269 6 5495700 3078200 VLENHAR VIQMWDLRFASSPLRVLENHARGILAIAWS RFASSPLRVLENHARGILAIAWSMADPELL R V L A R G 1 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 837.4457 O94979 O94979 255 261 SEC31A Protein transport protein Sec31A yes yes 2 0.036253 110.63 By MS/MS 3.5 0.5 1 1 2 95704 95704 0 15187 362 16103 38648;38649 27274;27275 27275 2 2612.6 0 VLENIELNK LRLHSLLGDYYQAIKVLENIELNKKSMYSR YYQAIKVLENIELNKKSMYSRVPECQVTTY K V L N K K 0 0 2 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 9 0 1070.5972 Q9Y262 Q9Y262 293 301 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 2.8574E-08 207.29 By MS/MS 5 0 1 1 6390700 6390700 0 15188 2868 16104 38650 27276 27276 1 262680 0 VLENIELNKK LRLHSLLGDYYQAIKVLENIELNKKSMYSR YQAIKVLENIELNKKSMYSRVPECQVTTYY K V L K K S 0 0 2 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1198.6921 Q9Y262 Q9Y262 293 302 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2;3 1.4352E-28 266.99 By MS/MS 6.5 1.12 2 2 2 2 8 41867000 41867000 0 15189 2868 16105 38651;38652;38653;38654;38655;38656;38657;38658 27277;27278;27279;27280 27279 4 741290 0 VLEQDKAR TQVVQERESLLVKIKVLEQDKARLQRLEDE SLLVKIKVLEQDKARLQRLEDELNRAKSTL K V L A R L 1 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 1 957.52434 P15924 P15924 1821 1828 DSP Desmoplakin yes yes 2 0.0085759 157.58 By MS/MS 2 0 1 1 217680 217680 0 15190 603 16106 38659 27281 27281 1 10820 0 VLEQLEDLDSR SCARLAEMRQKEIPRVLEQLEDLDSRVLYY EIPRVLEQLEDLDSRVLYYSATKNGILYRV R V L S R V 0 1 0 2 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1315.662 P26358 P26358 910 920 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 3.6491E-07 189.17 By MS/MS 3.5 1.12 1 1 1 1 4 3613500 3613500 0 15191 693 16107 38660;38661;38662;38663 27282;27283;27284 27283 3 118590 0 VLEQLTGQTPVFSK ICVGESGDRLTRAAKVLEQLTGQTPVFSKA KVLEQLTGQTPVFSKARYTVRSFGIRRNEK K V L S K A 0 0 0 0 0 2 1 1 0 0 2 1 0 1 1 1 2 0 0 2 0 0 14 0 1545.8403 P62913 P62913 39 52 RPL11 60S ribosomal protein L11 yes yes 2 6.8419E-12 195.72 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 9662300 9364100 298170 15192 1161 16108 38664;38665;38666 27285;27286;27287 27285 3 5501500 3213400 VLEQPVVVQSVGTDGR SALAQARLLYGNDAKVLEQPVVVQSVGTDG LEQPVVVQSVGTDGRVFHFLVFQLNTTDLD K V L G R V 0 1 0 1 0 2 1 2 0 0 1 0 0 0 1 1 1 0 0 5 0 0 16 0 1681.8999 Q9BZE1 Q9BZE1 335 350 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 3.8762E-10 182.37 By MS/MS 7.5 1.12 1 1 1 1 4 8938700 8938700 0 15193 2420 16109 38667;38668;38669;38670 27288 27288 1 227650 0 VLETEAVDQPDVVQR LKSPAIPEGKETLSKVLETEAVDQPDVVQR VLETEAVDQPDVVQRSHTVPYPDITNFLSV K V L Q R S 1 1 0 2 0 2 2 0 0 0 1 0 0 0 1 0 1 0 0 4 0 0 15 0 1696.8632 Q5TH69 Q5TH69 551 565 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes yes 2 5.8112E-10 216.68 By MS/MS 2 0 1 1 264580 264580 0 15194 1642 16110 38671 27289 27289 1 13151 0 VLETFLAK KATSSHPNSTSLKAKVLETFLAKSRPELLE STSLKAKVLETFLAKSRPELLEYYIKVILD K V L A K S 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 8 0 919.53787 Q14258 Q14258 440 447 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0069891 129.68 By MS/MS 5 0 1 1 701740 701740 0 15195 1427 16111 38672 27290 27290 1 28844 0 VLETVGVFEVPK TTRRHLSSRNRPEGKVLETVGVFEVPKQNG EGKVLETVGVFEVPKQNGKYETGQLFLHSI K V L P K Q 0 0 0 0 0 0 2 1 0 0 1 1 0 1 1 0 1 0 0 4 0 0 12 0 1315.7388 Q9Y2S7 Q9Y2S7 61 72 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 3.8358E-11 206.49 By MS/MS 8.33 1.25 1 1 1 3 9122300 9122300 0 15196 2900 16112 38673;38674;38675 27291;27292;27293 27291 2 454310 0 VLEVFFIPMDPR PFCYLSVPLPISHKRVLEVFFIPMDPRRKP HKRVLEVFFIPMDPRRKPEQHRLVVPKKGK R V L P R R 0 1 0 1 0 0 1 0 0 1 1 0 1 2 2 0 0 0 0 2 0 0 12 0 1461.769 P51784 P51784 495 506 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 2 0.014921 83.862 By MS/MS 4 0 1 1 478620 478620 0 15197 976 16113 38676 27294 27294 734 1 13066 0 VLEVNPQNK LLMNEFESAKGDFEKVLEVNPQNKAARLQI KGDFEKVLEVNPQNKAARLQISMCQKKAKE K V L N K A 0 0 2 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 9 0 1039.5662 Q13451 Q13451 377 385 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 2 0.037433 101.25 By MS/MS 6 0 1 1 1828000 1828000 0 15198 1372 16114 38677 27295 27295 1 14255 0 VLFALSR NNNINSQINMYLLSRVLFALSRLAVEKGYI INMYLLSRVLFALSRLAVEKGYIPEPRWDP R V L S R L 1 1 0 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 7 0 804.48577 Q9Y6I8 Q9Y6I8 134 140 PXMP4 Peroxisomal membrane protein 4 yes yes 2 0.036253 110.63 By MS/MS 8.5 0.5 1 1 2 2515500 2515500 0 15199 3006 16115 38678;38679 27296 27296 1 309100 0 VLFDKVASQGEVVR TRNSEPAGLETPEAKVLFDKVASQGEVVRK KVLFDKVASQGEVVRKLKTEKAPKDQVDIA K V L V R K 1 1 0 1 0 1 1 1 0 0 1 1 0 1 0 1 0 0 0 4 0 0 14 1 1545.8515 P07814 P07814 903 916 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.00031621 171.62 By MS/MS 3.5 0.5 2 2 4 10188000 10188000 0 15200 493 16116 38680;38681;38682;38683 27297;27298 27298 2 267310 0 VLFFGTDQFAR EDCRDSRVREKPPWRVLFFGTDQFAREALR PPWRVLFFGTDQFAREALRALHAARENKEE R V L A R E 1 1 0 1 0 1 0 1 0 0 1 0 0 3 0 0 1 0 0 1 0 0 11 0 1299.6612 Q96DP5 Q96DP5 50 60 MTFMT Methionyl-tRNA formyltransferase, mitochondrial yes yes 2 1.2451E-10 200.6 By MS/MS 7 0 1 1 491290 491290 0 15201 2153 16117 38684 27299 27299 1 8779.5 0 VLFGEITR KLLNIRPPPRAQWIRVLFGEITRLLNHIMA PRAQWIRVLFGEITRLLNHIMAVTTHALDL R V L T R L 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 8 0 933.52837 O75306 O75306 172 179 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 2 0.032964 92.439 By MS/MS 7.5 0.5 1 1 2 21041000 21041000 0 15202 294 16118 38685;38686 27300 27300 1 386530 0 VLFLIPK LAKGEPPNSDLHPMRVLFLIPKNSPPTLEG NSDLHPMRVLFLIPKNSPPTLEGQHSKPFK R V L P K N 0 0 0 0 0 0 0 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 7 0 828.54731 O00506;Q9P289;Q9Y6E0 O00506 223 229 STK25;STK26;STK24 Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes no 2 0.030416 114.67 By MS/MS 6.5 0.5 1 1 2 1132200 1132200 0 15203 102 16119 38687;38688 27301 27301 1 9945.8 0 VLFLLGADGGCITR GYKPGVEAIRKNPPKVLFLLGADGGCITRQ KVLFLLGADGGCITRQDLPKDCFIIYQGHH K V L T R Q 1 1 0 1 1 0 0 3 0 1 3 0 0 1 0 0 1 0 0 1 0 0 14 0 1490.7915 P28331 P28331 544 557 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 2 0.00047045 162.68 By MS/MS 5 0 1 1 152890 152890 0 15204 718 16120 38689 27302 27302 1 6284.4 0 VLFRPSDTANSSNQDALSSNTSLK LRNHPSFYVFNHRGRVLFRPSDTANSSNQD NSSNQDALSSNTSLKLRKLESLRR______ R V L L K L 2 1 3 2 0 1 0 0 0 0 3 1 0 1 1 6 2 0 0 1 0 0 24 1 2551.2514 Q8N4V1 Q8N4V1 99 122 MMGT1 Membrane magnesium transporter 1 yes yes 3 5.4746E-05 92.518 By MS/MS 10 0 1 1 2282600 2282600 0 15205 1917 16121 38690 27303 27303 1 2426200 0 VLGATLLPDLIQK HKQADMQEEKNRIERVLGATLLPDLIQKVL ERVLGATLLPDLIQKVLTFALSEEVRPQDT R V L Q K V 1 0 0 1 0 1 0 1 0 1 4 1 0 0 1 0 1 0 0 1 0 0 13 0 1379.8388 P55786 P55786 782 794 NPEPPS Puromycin-sensitive aminopeptidase yes yes 2 0.00028707 143.96 By MS/MS 4 0 1 1 179140 179140 0 15206 1035 16122 38691 27304 27304 1 4890.4 0 VLGCILSELK FQLDMDLILDSGKFRVLGCILSELKQKGDR SGKFRVLGCILSELKQKGDRVVLFSQFTMM R V L L K Q 0 0 0 0 1 0 1 1 0 1 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1130.6369 Q9H4L7 Q9H4L7 858 867 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 0.00033463 151.44 By MS/MS 3 0 1 1 434680 434680 0 15207 2502 16123 38692 27305 27305 1 11347 0 VLGCPEALTGSYK VSWSGRGGAGNISLKVLGCPEALTGSYKSM LKVLGCPEALTGSYKSMFQKLPDIREVLTC K V L Y K S 1 0 0 0 1 0 1 2 0 0 2 1 0 0 1 1 1 0 1 1 0 0 13 0 1393.6912 Q14181 Q14181 195 207 POLA2 DNA polymerase alpha subunit B yes yes 2 0.0047433 104.82 By MS/MS 5 0 1 1 2087600 2087600 0 15208 1416 16124 38693 27306 27306 1 85808 0 VLGDLIFNQPDR FGTEVLLENGDINRKVLGDLIFNQPDRRQL NRKVLGDLIFNQPDRRQLLNAITHPEIRKE K V L D R R 0 1 1 2 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 12 0 1385.7303 Q8WVC6 Q8WVC6 68 79 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 1.4927E-16 221.5 By MS/MS 9 0 1 1 1607900 1607900 0 15209 2028 16125 38694 27307 27307 1 922780 0 VLGDLIFNQPDRR FGTEVLLENGDINRKVLGDLIFNQPDRRQL RKVLGDLIFNQPDRRQLLNAITHPEIRKEM K V L R R Q 0 2 1 2 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 13 1 1541.8314 Q8WVC6 Q8WVC6 68 80 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 2 0.005656 125.68 By MS/MS 9.5 0.5 1 1 2 990550 990550 0 15210 2028 16126 38695;38696 27308 27308 1 614020 0 VLGEAMTGISQNAK MSYFGCLDSVMENSKVLGEAMTGISQNAKN KVLGEAMTGISQNAKNGNLPEFGDAISTAS K V L A K N 2 0 1 0 0 1 1 2 0 1 1 1 1 0 0 1 1 0 0 1 0 0 14 0 1417.7235 Q9Y490 Q9Y490 1402 1415 TLN1 Talin-1 yes yes 2 1.0538E-25 236.22 By MS/MS 2.2 0.748 1 2 2 5 1856500 1856500 0 15211 2947 16127;16128 38697;38698;38699;38700;38701 27309;27310;27311 27309 1699 3 82897 0 VLGELWPLFGGR LICGPNGCGKSSLFRVLGELWPLFGGRLTK LFRVLGELWPLFGGRLTKPERGKLFYVPQR R V L G R L 0 1 0 0 0 0 1 3 0 0 3 0 0 1 1 0 0 1 0 1 0 0 12 0 1342.7398 P28288 P28288 485 496 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 2 0.00025087 150.27 By MS/MS 6 0 1 1 828390 828390 0 15212 716 16129 38702 27312 27312 1 6459.8 0 VLGGSFADQK DEALKALGHPAMLSKVLGGSFADQKICQGC AMLSKVLGGSFADQKICQGCPHRYECEESF K V L Q K I 1 0 0 1 0 1 0 2 0 0 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1020.524 Q93008;O00507 Q93008 1713 1722 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2 0.00061553 140.45 By MS/MS 1.5 0.5 1 1 2 3883500 3883500 0 15213 2096 16130 38703;38704 27313 27313 1 192620 0 VLGIQVDTDGSGR GRDRVGVGIRSSYIRVLGIQVDTDGSGRSF IRVLGIQVDTDGSGRSFAGAVSPQEEEEFR R V L G R S 0 1 0 2 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1315.6732 P33992 P33992 296 308 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.0001013 155 By MS/MS 2.67 1.7 1 1 1 3 7840300 7840300 0 15214 774 16131 38705;38706;38707 27314;27315 27314 2 325730 0 VLGLLER QLDAISEKVDVIAKRVLGLLERSSMSLTQD KVDVIAKRVLGLLERSSMSLTQDMLNGELK R V L E R S 0 1 0 0 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 7 0 798.49634 Q5JPH6 Q5JPH6 449 455 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.040889 107.43 By MS/MS 7 0.816 1 1 1 3 6939200 6939200 0 15215 1604 16132 38708;38709;38710 27316 27316 1 72948 0 VLGLVLLR IKPKNAKQPEREEKRVLGLVLLRGENLVSM PEREEKRVLGLVLLRGENLVSMTVEGPPPK R V L L R G 0 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 2 0 0 8 0 881.60622 P63162;P14678 P63162 66 73 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B yes no 2 0.0015909 163.34 By MS/MS 8 0 1 1 303900 303900 0 15216 591 16133 38711 27317 27317 1 20048 0 VLGTAFDPFLGGK AFQVSACAFNKGKLKVLGTAFDPFLGGKNF LKVLGTAFDPFLGGKNFDEKLVEHFCAEFK K V L G K N 1 0 0 1 0 0 0 3 0 0 2 1 0 2 1 0 1 0 0 1 0 0 13 0 1320.7078 Q92598 Q92598 222 234 HSPH1 Heat shock protein 105 kDa yes yes 2 0.0021025 153.1 By MS/MS 4 0 1 1 1237500 1237500 0 15217 2063 16134 38712 27318 27318 1 33782 0 VLGTPVETIELTEDR VELTKAGVLARYGVRVLGTPVETIELTEDR VLGTPVETIELTEDRRAFAARMAEIGEHVA R V L D R R 0 1 0 1 0 0 3 1 0 1 2 0 0 0 1 0 3 0 0 2 0 0 15 0 1670.8727 P27708 P27708 501 515 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 2.3692E-14 203.51 By MS/MS 3 1.41 1 1 1 1 1 5 1715400 1715400 0 15218 709 16135 38713;38714;38715;38716;38717 27319;27320;27321 27319 3 68052 0 VLGTSPEAIDSAENR LPNNMAMALHRQQCRVLGTSPEAIDSAENR VLGTSPEAIDSAENRFKFSRLLDTIGISQP R V L N R F 2 1 1 1 0 0 2 1 0 1 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1557.7635 P27708 P27708 1034 1048 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 1.8216E-28 276.17 By MS/MS 2.5 1.12 1 1 1 1 4 6599500 6599500 0 15219 709 16136 38718;38719;38720;38721 27322;27323;27324;27325 27325 4 289520 0 VLGVLEVSR RMRIQKAGGNVRDGRVLGVLEVSRSIGDGQ NVRDGRVLGVLEVSRSIGDGQYKRCGVTSV R V L S R S 0 1 0 0 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 3 0 0 9 0 970.58113 Q9H0C8 Q9H0C8 283 291 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 2 0.0067288 111.95 By MS/MS 7 0 1 1 1427400 1427400 0 15220 2452 16137 38722 27326 27326 1 25509 0 VLGVPIIVQASQAEK DVSSVPLAIGLTGQRVLGVPIIVQASQAEK VLGVPIIVQASQAEKNRAAAMANNLQKGSA R V L E K N 2 0 0 0 0 2 1 1 0 2 1 1 0 0 1 1 0 0 0 3 0 0 15 0 1550.9032 Q14498 Q14498 218 232 RBM39 RNA-binding protein 39 yes yes 2 0.00021466 132.86 By MS/MS 5 1.41 1 1 1 1 1 5 3855500 3855500 0 15221 1433 16138 38723;38724;38725;38726;38727 27327;27328 27327 2 72104 0 VLGYIQLGQK DTQQGPQVDKEQFERVLGYIQLGQKEGAKL EQFERVLGYIQLGQKEGAKLLCGGERFGER R V L Q K E 0 0 0 0 0 2 0 2 0 1 2 1 0 0 0 0 0 0 1 1 0 0 10 0 1117.6495 P30837 P30837 370 379 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 0.00011647 163.77 By MS/MS By matching 6.33 0.471 2 1 2 1 14949000 14925000 24614 15222 747 16139 38728;38729;38730 27329 27329 1 118610 75489 VLHAAASAGEHEK GDAGSLTSASQRFYRVLHAAASAGEHEKVV YRVLHAAASAGEHEKVVQGLFDNFLRLRLR R V L E K V 4 0 0 0 0 0 2 1 2 0 1 1 0 0 0 1 0 0 0 1 0 0 13 0 1318.663 Q8WVB6 Q8WVB6 635 647 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 3 4.1724E-08 155.88 By MS/MS 4 0 1 1 0 0 0 15223 2027 16140 38731 27330 27330 1 0 0 VLHALQEAAPEVVQPTTVQSSTIPSLLR LSSKGSFADLGLEPRVLHALQEAAPEVVQP QPTTVQSSTIPSLLRGRHVVCAAETGSGKT R V L L R G 3 1 0 0 0 3 2 0 1 1 4 0 0 0 3 3 3 0 0 4 0 0 28 0 2983.6342 Q9NUL7 Q9NUL7 137 164 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 3 0.00027517 68.565 By MS/MS 6 0 1 1 3261800 3261800 0 15224 2638 16141 38732 27331;27332 27331 2 25435 0 VLHDAQQQCR RGLLLSRENEDQVVKVLHDAQQQCRDGHPV DQVVKVLHDAQQQCRDGHPVVVNILIGRTD K V L C R D 1 1 0 1 1 3 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1253.5935 A1L0T0 A1L0T0 600 609 ILVBL Acetolactate synthase-like protein yes yes 2 0.00065237 138.98 By MS/MS 6 0 1 1 2605800 2605800 0 15225 8 16142 38733 27333 27333 1 20320 0 VLHEAEGHIVTCETNTGEVYR ______________________________ GHIVTCETNTGEVYRGKLIEAEDNMNCQMS K V L Y R G 1 1 1 0 1 0 4 2 2 1 1 0 0 0 0 0 3 0 1 3 0 0 21 0 2413.1332 P62318 P62318 9 29 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 3;4 4.1857E-06 133.94 By MS/MS 10 0 2 2 551800 551800 0 15226 1131 16143 38734;38735 27334;27335 27335 2 586500 0 VLHPEQHR STTVTNPEPMGKQGRVLHPEQHRVVSVREC PMGKQGRVLHPEQHRVVSVRECARSQGFPD R V L H R V 0 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1014.5359 P26358 P26358 1539 1546 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 3 0.019456 105.14 By MS/MS 2 0 1 1 0 0 0 15227 693 16144 38736 27336 27336 1 0 0 VLIANNGIAAVK AEFVTRFGGNKVIEKVLIANNGIAAVKCMR IEKVLIANNGIAAVKCMRSIRRWSYEMFRN K V L V K C 3 0 2 0 0 0 0 1 0 2 1 1 0 0 0 0 0 0 0 2 0 0 12 0 1181.7132 Q13085;O00763 Q13085 121 132 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 2 0.0020928 120.87 By MS/MS 1 0 1 1 145890 145890 0 15228 1332 16145 38737 27337 27337 1 7127.7 0 VLIDWINDVLVGER DPNSRSDPKLQELMKVLIDWINDVLVGERI KVLIDWINDVLVGERIIVKDLAEDLYDGQV K V L E R I 0 1 1 2 0 0 1 1 0 2 2 0 0 0 0 0 0 1 0 3 0 0 14 0 1639.8934 Q9NVD7 Q9NVD7 100 113 PARVA Alpha-parvin yes yes 2 0.0065052 100.09 By MS/MS 6 0 1 1 59107 59107 0 15229 2649 16146 38738 27338 27338 1 460.92 0 VLIEGSINSVR LLLQPVTISRNEKEKVLIEGSINSVRVSIA EKEKVLIEGSINSVRVSIAVKQADEIEKIL K V L V R V 0 1 1 0 0 0 1 1 0 2 1 0 0 0 0 2 0 0 0 2 0 0 11 0 1185.6717 P59998 P59998 61 71 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 2 0.0024091 129.88 By MS/MS 9.5 0.5 1 1 2 2159900 2159900 0 15230 1062 16147 38739;38740 27339;27340 27340 2 1411800 0 VLIFSQMTK LLQKMLKNLKEGGHRVLIFSQMTKMLDLLE KEGGHRVLIFSQMTKMLDLLEDFLEHEGYK R V L T K M 0 0 0 0 0 1 0 0 0 1 1 1 1 1 0 1 1 0 0 1 0 0 9 0 1065.5893 Q14839;Q8TDI0;Q12873 Q14839 1069 1077 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.00090319 137.14 By MS/MS 2 0 1 1 882530 882530 0 15231 1449 16148 38741 27341 27341 1137 1 43866 0 VLIFSQMTR VLDKLLPKLKEQGSRVLIFSQMTRVLDILE KEQGSRVLIFSQMTRVLDILEDYCMWRNYE R V L T R V 0 1 0 0 0 1 0 0 0 1 1 0 1 1 0 1 1 0 0 1 0 0 9 0 1093.5954 O60264;P28370 O60264 502 510 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.011638 101.46 By MS/MS 3 0 1 1 176530 176530 0 15232 240;720 16149 38742 27342 27342 1 4608.2 0 VLIGGDETPEGQR LAEGTAIKDLKNPDRVLIGGDETPEGQRAV DRVLIGGDETPEGQRAVQALCAVYEHWVPR R V L Q R A 0 1 0 1 0 1 2 3 0 1 1 0 0 0 1 0 1 0 0 1 0 0 13 0 1369.6838 O60701 O60701 178 190 UGDH UDP-glucose 6-dehydrogenase yes yes 2 0.0012438 128.91 By MS/MS 6 0 1 1 2425000 2425000 0 15233 259 16150 38743 27343 27343 1 18910 0 VLIIGGGDGGVLR MIANLPLCSHPNPRKVLIIGGGDGGVLREV RKVLIIGGGDGGVLREVVKHPSVESVVQCE K V L L R E 0 1 0 1 0 0 0 5 0 2 2 0 0 0 0 0 0 0 0 2 0 0 13 0 1224.719 P19623 P19623 97 109 SRM Spermidine synthase yes yes 2 0.0018793 139.43 By MS/MS 9 0.816 1 1 1 3 7635900 7635900 0 15234 635 16151 38744;38745;38746 27344 27344 1 736310 0 VLISDSLDPCCR ______________________________ LRKVLISDSLDPCCRKILQDGGLQVVEKQN K V L C R K 0 1 0 2 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 1 0 0 12 0 1433.6643 O43175 O43175 9 20 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 1.1733E-07 192.12 By MS/MS By matching 7.8 1.6 2 1 1 1 4 1 11806000 11778000 28183 15235 185 16152 38747;38748;38749;38750;38751 27345;27346 27345 2 439690 86435 VLISTDVWAR ERESIMKEFRSGASRVLISTDVWARGLDVP SGASRVLISTDVWARGLDVPQVSLIINYDL R V L A R G 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 2 0 0 10 0 1158.6397 P38919 P38919 330 339 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 2 0.00012899 172.23 By MS/MS 6 0 1 1 2676700 2676700 0 15236 821 16153 38752 27347 27347 1 20873 0 VLITTDLLAR ERDVIMREFRSGSSRVLITTDLLARGIDVQ SGSSRVLITTDLLARGIDVQQVSLVINYDL R V L A R G 1 1 0 1 0 0 0 0 0 1 3 0 0 0 0 0 2 0 0 1 0 0 10 0 1113.6758 P60842;Q14240 P60842 325 334 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 1.5922E-15 215.38 By MS/MS By MS/MS 5.55 2.09 4 3 3 3 6 26 5 4 2 2 54 4 515830000 515140000 693440 15237 1074 16154 38753;38754;38755;38756;38757;38758;38759;38760;38761;38762;38763;38764;38765;38766;38767;38768;38769;38770;38771;38772;38773;38774;38775;38776;38777;38778;38779;38780;38781;38782;38783;38784;38785;38786;38787;38788;38789;38790;38791;38792;38793;38794;38795;38796;38797;38798;38799;38800;38801;38802;38803;38804;38805;38806;38807;38808;38809;38810 27348;27349;27350;27351;27352;27353;27354;27355;27356;27357;27358;27359;27360;27361;27362;27363;27364;27365;27366;27367;27368;27369;27370;27371;27372;27373;27374;27375;27376;27377;27378;27379;27380;27381;27382;27383;27384;27385;27386;27387;27388;27389;27390;27391;27392;27393;27394;27395;27396;27397;27398;27399;27400;27401;27402;27403;27404;27405;27406;27407;27408;27409;27410;27411;27412;27413 27411 66 51703000 2110500 VLIVSEDPELPYMRPPLSK FAAARSIRARDPGARVLIVSEDPELPYMRP SEDPELPYMRPPLSKELWFSDDPNVTKTLR R V L S K E 0 1 0 1 0 0 2 0 0 1 3 1 1 0 4 2 0 0 1 2 0 0 19 1 2182.1708 O95831 O95831 159 177 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.0098595 66.673 By MS/MS 5.5 1.12 1 1 1 1 4 6769500 6769500 0 15238 409 16155 38811;38812;38813;38814 27414 27414 217 1 245840 0 VLIVSNNK QLSLLPPYICQLPLRVLIVSNNKLGALPPD ICQLPLRVLIVSNNKLGALPPDIGTLGSLR R V L N K L 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 0 8 0 885.52837 O75427 O75427 140 147 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.049277 91.626 By MS/MS By matching 4 0.816 1 1 1 1 2 1074000 945990 128040 15239 308 16156 38815;38816;38817 27415 27415 1 38884 222680 VLKAQAQSQK IKRAFLIEEQKIVVKVLKAQAQSQKAK___ KIVVKVLKAQAQSQKAK_____________ K V L Q K A 2 0 0 0 0 3 0 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1099.635 P49207 P49207 106 115 RPL34 60S ribosomal protein L34 yes yes 2 0.016777 106.88 By MS/MS 10 0 1 1 0 0 0 15240 914 16157 38818 27416 27416 1 0 0 VLKDEIDVK RGMGGLFSVGETTAKVLKDEIDVKFKDVAG GETTAKVLKDEIDVKFKDVAGCEEAKLEIM K V L V K F 0 0 0 2 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 2 0 0 9 1 1057.6019 Q9Y4W6 Q9Y4W6 298 306 AFG3L2 AFG3-like protein 2 yes yes 3 0.0064734 119.75 By MS/MS 5 0 1 1 1243100 1243100 0 15241 2960 16158 38819 27417 27417 1 51096 0 VLLAAAVCTK ______________________________ ______________________________ M V L T K A 3 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 1 0 0 2 0 0 10 0 1044.6002 P48444 P48444 2 11 ARCN1 Coatomer subunit delta yes yes 2 9.4183E-05 166.3 By MS/MS 6 0 1 1 7483500 7483500 0 15242 903 16159 38820 27418 27418 1 58357 0 VLLATLSIPITPER RKNLTQDEMQRMSTRVLLATLSIPITPERT RVLLATLSIPITPERTDIARLLDMDGIIVE R V L E R T 1 1 0 0 0 0 1 0 0 2 3 0 0 0 2 1 2 0 0 1 0 0 14 0 1521.913 Q14152 Q14152 322 335 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.00011104 166.86 By MS/MS 4 1.41 1 1 1 1 1 5 3756800 3756800 0 15243 1409 16160 38821;38822;38823;38824;38825 27419;27420;27421 27420 3 92865 0 VLLDFLMEEK AYVEQIEKAFNYASKVLLDFLMEEKELVAH NYASKVLLDFLMEEKELVAHLRSIKRYFLM K V L E K E 0 0 0 1 0 0 2 0 0 0 3 1 1 1 0 0 0 0 0 1 0 0 10 0 1235.6472 Q9BSJ2 Q9BSJ2 498 507 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00011004 158.76 By MS/MS 4 0 1 1 349750 349750 0 15244 2338 16161 38826 27422 27422 1465 1 9547.7 0 VLLDIFTGVR GEKRKAADETLCQTKVLLDIFTGVRLYLPP LCQTKVLLDIFTGVRLYLPPSTPDFSRLRR K V L V R L 0 1 0 1 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 2 0 0 10 0 1131.6652 P49916 P49916 933 942 LIG3 DNA ligase 3 yes yes 2 0.006195 103.55 By MS/MS 4 0 1 1 46234 46234 0 15245 941 16162 38827 27423 27423 1 1262.1 0 VLLDNVENK TLDSFMQHDVQELCRVLLDNVENKMKGTCV VQELCRVLLDNVENKMKGTCVEGTIPKLFR R V L N K M 0 0 2 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 9 0 1042.5659 Q93009 Q93009 302 310 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 2 0.033634 89.029 By MS/MS 3.5 0.5 1 1 2 1675600 1675600 0 15246 2097 16163 38828;38829 27424 27424 1 44466 0 VLLEELTDPTMR ALHCAAQYGHTEVVKVLLEELTDPTMRNNK VVKVLLEELTDPTMRNNKFETPLDLAALYG K V L M R N 0 1 0 1 0 0 2 0 0 0 3 0 1 0 1 0 2 0 0 1 0 0 12 0 1415.733 Q92625 Q92625 167 178 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.022734 82.831 By MS/MS 3.5 0.5 1 1 2 299270 299270 0 15247 2071 16164 38830;38831 27425 27425 1 7898.2 0 VLLESEQFLTELTR ______________________________ MVLLESEQFLTELTRLFQKCRTSGSVYITL M V L T R L 0 1 0 0 0 1 3 0 0 0 4 0 0 1 0 1 2 0 0 1 0 0 14 0 1676.8985 P37108 P37108 2 15 SRP14 Signal recognition particle 14 kDa protein yes yes 2 0.0031366 111.94 By MS/MS 10 0 1 1 434170 434170 0 15248 813 16165 38832 27426;27427 27426 2 461480 0 VLLGETGKEK RAYQKQPTIFQNKKRVLLGETGKEKLPRYY QNKKRVLLGETGKEKLPRYYKNIGLGFKTP R V L E K L 0 0 0 0 0 0 2 2 0 0 2 2 0 0 0 0 1 0 0 1 0 0 10 1 1072.6128 P62280 P62280 23 32 RPS11 40S ribosomal protein S11 yes yes 2 0.0064723 128.6 By MS/MS By matching 9 0 2 1 1 3867000 3816100 50862 15249 1127 16166 38833;38834 27428 27428 1 2190100 548150 VLLGETGKEKLPR RAYQKQPTIFQNKKRVLLGETGKEKLPRYY KRVLLGETGKEKLPRYYKNIGLGFKTPKEA R V L P R Y 0 1 0 0 0 0 2 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 13 2 1438.8508 P62280 P62280 23 35 RPS11 40S ribosomal protein S11 yes yes 2;3 0.0058261 126.66 By MS/MS 8.67 0.471 1 2 3 5370300 5370300 0 15250 1127 16167 38835;38836;38837 27429;27430 27430 2 3035900 0 VLLGFSSDESDVEASPR GGPGGASAAPAAGSKVLLGFSSDESDVEAS LGFSSDESDVEASPRDQAGGGGRKDRASLQ K V L P R D 1 1 0 2 0 0 2 1 0 0 2 0 0 1 1 4 0 0 0 2 0 0 17 0 1806.8636 Q9Y2U8 Q9Y2U8 135 151 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 3.9281E-36 215.02 By MS/MS 4 0 1 1 0 0 0 15251 2902 16168 38838 27431 27431 1 0 0 VLLIESLATMEPDSRPELQEK LEESKQWECLTSECRVLLIESLATMEPDSR LATMEPDSRPELQEKAALLKKTLENLE___ R V L E K A 1 1 0 1 0 1 4 0 0 1 4 1 1 0 2 2 1 0 0 1 0 0 21 1 2397.2461 Q5VYK3 Q5VYK3 1813 1833 ECM29 Proteasome-associated protein ECM29 homolog yes yes 3 0.0014498 80.596 By MS/MS 3 0 1 1 1162900 1162900 0 15252 1657 16169 38839 27432 27432 1207 1 30358 0 VLLISDPTTDK DKREYRGLELANGIKVLLISDPTTDKSSAA NGIKVLLISDPTTDKSSAALDVHIGSLSDP K V L D K S 0 0 0 2 0 0 0 0 0 1 2 1 0 0 1 1 2 0 0 1 0 0 11 0 1200.6602 P14735 P14735 75 85 IDE Insulin-degrading enzyme yes yes 2 0.026608 98.033 By MS/MS 4 0 1 1 770880 770880 0 15253 592 16170 38840 27433 27433 1 21044 0 VLLLPLER PSFRRSSLSRLGSSRVLLLPLERDSELLRE SRLGSSRVLLLPLERDSELLRERESVLRLR R V L E R D 0 1 0 0 0 0 1 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 8 0 951.6117 O95071 O95071 296 303 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.050767 91.041 By MS/MS 2.5 1.12 1 1 1 1 4 1630800 1630800 0 15254 364 16171 38841;38842;38843;38844 27434 27434 1 58892 0 VLLLSSPGLEELYR AEPITADSDPAYSSKVLLLSSPGLEELYRC KVLLLSSPGLEELYRCCMLFVDDMAEPRET K V L Y R C 0 1 0 0 0 0 2 1 0 0 5 0 0 0 1 2 0 0 1 1 0 0 14 0 1587.8872 Q8N163 Q8N163 310 323 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 0.00088045 125.72 By MS/MS 3.5 0.5 1 1 2 622530 622530 0 15255 1895 16172 38845;38846 27435 27435 1 16399 0 VLLNIGQQMLR ______________________________ MGCKVLLNIGQQMLRRKVVDCSREETRLSR K V L L R R 0 1 1 0 0 2 0 1 0 1 3 0 1 0 0 0 0 0 0 1 0 0 11 0 1283.7384 P30825 P30825 5 15 SLC7A1 High affinity cationic amino acid transporter 1 yes yes 2 2.178E-29 257.22 By MS/MS 4 3.16 1 1 1 1 1 5 1349700 1349700 0 15256 746 16173 38847;38848;38849;38850;38851 27436;27437;27438 27436 503 3 53465 0 VLLPVLLNK LGTDAEGQKVKDSMRVLLPVLLNKNHDNCD VKDSMRVLLPVLLNKNHDNCDKIRAILLYI R V L N K N 0 0 1 0 0 0 0 0 0 0 4 1 0 0 1 0 0 0 0 2 0 0 9 0 1007.6743 O00186 O00186 389 397 STXBP3 Syntaxin-binding protein 3 yes yes 2 0.0028512 120.65 By MS/MS 5.5 0.5 1 1 2 633820 633820 0 15257 76 16174 38852;38853 27439 27439 1 7211.1 0 VLLPVWEAEGLGLR EVLYKLYKDPAGPSRVLLPVWEAEGLGLRV RVLLPVWEAEGLGLRVGAAGPAPGTGSGPL R V L L R V 1 1 0 0 0 0 2 2 0 0 4 0 0 0 1 0 0 1 0 2 0 0 14 0 1550.8821 Q5T447 Q5T447 61 74 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 2 0.011297 92.611 By MS/MS 4 0 1 1 69067 69067 0 15258 1626 16175 38854 27440 27440 1 1885.4 0 VLLQAFDVVER LGQLNAEHAEADVRRVLLQAFDVVERSFLE DVRRVLLQAFDVVERSFLESIDDALAEKAS R V L E R S 1 1 0 1 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 3 0 0 11 0 1287.7187 Q15750 Q15750 105 115 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 5.4679E-07 185.96 By MS/MS 6 0.816 1 1 1 3 7053900 7053900 0 15259 1516 16176 38855;38856;38857 27441;27442 27442 2 57001 0 VLLQASQDENFGNTTPR AEVTRTARKQSAQKRVLLQASQDENFGNTT LQASQDENFGNTTPRNQVIPRTPSSFRQPF R V L P R N 1 1 2 1 0 2 1 1 0 0 2 0 0 1 1 1 2 0 0 1 0 0 17 0 1888.9279 P57740 P57740 32 48 NUP107 Nuclear pore complex protein Nup107 yes yes 2 1.574E-68 293.8 By MS/MS 4 0 1 1 2731300 2731300 0 15260 1057 16177 38858 27443 27443 1 74561 0 VLLQEEGTR EKAIKEKEYEIERLRVLLQEEGTRKREYEN EIERLRVLLQEEGTRKREYENELAKVRNHY R V L T R K 0 1 0 0 0 1 2 1 0 0 2 0 0 0 0 0 1 0 0 1 0 0 9 0 1043.5611 P15924 P15924 1176 1184 DSP Desmoplakin yes yes 2 0.0054704 125.71 By MS/MS 2 0 1 1 0 0 0 15261 603 16178 38859 27444 27444 1 0 0 VLLSALER LLSEEVELYGETKAKVLLSALERLKHRPDG YGETKAKVLLSALERLKHRPDGKYVVVTGI K V L E R L 1 1 0 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 8 0 899.54402 P11586 P11586 355 362 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.0066277 131.03 By MS/MS 6 1.41 1 1 1 1 1 5 14671000 14671000 0 15262 556 16179 38860;38861;38862;38863;38864 27445;27446 27445 2 428650 0 VLLSPSIPSVGQDQTLSPGSK PSMGTKPKPAGQQPRVLLSPSIPSVGQDQT IPSVGQDQTLSPGSKQESPPAAAVRPFTPQ R V L S K Q 0 0 0 1 0 2 0 2 0 1 3 1 0 0 3 5 1 0 0 2 0 0 21 0 2109.1317 Q13625 Q13625 553 573 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 6.9203E-09 155.37 By MS/MS 3.5 0.5 1 1 2 1167900 1167900 0 15263 1391 16180 38865;38866 27447 27447 1 30618 0 VLLTMIAR ______________________________ ______________________________ M V L A R V 1 1 0 0 0 0 0 0 0 1 2 0 1 0 0 0 1 0 0 1 0 0 8 0 915.55756 O75396 O75396 2 9 SEC22B Vesicle-trafficking protein SEC22b yes yes 2 0.0019724 153.73 By MS/MS 9 0.707 1 2 1 4 6276400 6276400 0 15264 304 16181;16182 38867;38868;38869;38870 27448;27449;27450 27449 168 3 3138000 0 VLLTTQGVDMISK TQTPSWLGLPNNAERVLLTTQGVDMISKML ERVLLTTQGVDMISKMLKMQMLEDEDDLAY R V L S K M 0 0 0 1 0 1 0 1 0 1 2 1 1 0 0 1 2 0 0 2 0 0 13 0 1403.7694 Q14204 Q14204 4330 4342 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.1038E-13 214.04 By MS/MS By MS/MS 2 1.07 3 2 1 1 5 2 7255300 7129900 125380 15265 1421 16183;16184 38871;38872;38873;38874;38875;38876;38877 27451;27452;27453;27454 27452 1120 4 324850 120350 VLLVGADNFTLLGK NELDLACGERIRLEKVLLVGADNFTLLGKP KVLLVGADNFTLLGKPLLGKDLVRVEATVI K V L G K P 1 0 1 1 0 0 0 2 0 0 4 1 0 1 0 0 1 0 0 2 0 0 14 0 1458.8446 Q7Z2W9 Q7Z2W9 133 146 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 0.0047035 105.25 By MS/MS 9 0 1 1 81520 81520 0 15266 1778 16185 38878 27455 27455 1 46785 0 VLLVPGPEKEN ADAMKQMQEKKNVGKVLLVPGPEKEN____ NVGKVLLVPGPEKEN_______________ K V L E N - 0 0 1 0 0 0 2 1 0 0 2 1 0 0 2 0 0 0 0 2 0 0 11 1 1193.6656 Q99536 Q99536 383 393 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 2 0.041048 105.4 By MS/MS 7 0.816 1 1 1 3 5038100 5038100 0 15267 2272 16186 38879;38880;38881 27456 27456 1 70240 0 VLMSVLNDNSR INVSVAIITFASEPKVLMSVLNDNSRDMTE SEPKVLMSVLNDNSRDMTEVISSLENANYK K V L S R D 0 1 2 1 0 0 0 0 0 0 2 0 1 0 0 2 0 0 0 2 0 0 11 0 1246.634 P06681 P06681 304 314 C2 Complement C2;Complement C2b fragment;Complement C2a fragment yes yes 2 0.0044137 101.64 By MS/MS By matching 2.5 1.12 1 1 1 1 2 2 1353300 1278100 75222 15268 479 16187 38882;38883;38884;38885 27457 27457 274 1 34032 65550 VLNALKPEK HGLALQISENLFSNKVLNALKPEKDVDGVT NLFSNKVLNALKPEKDVDGVTDINLGKLVR K V L E K D 1 0 1 0 0 0 1 0 0 0 2 2 0 0 1 0 0 0 0 1 0 0 9 1 1010.6124 Q6UB35 Q6UB35 169 177 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 0.021392 82.287 By MS/MS 4 0 1 1 1188200 1188200 0 15269 1726 16188 38886 27458 27458 1 32438 0 VLNALKPEKDVDGVTDINLGK HGLALQISENLFSNKVLNALKPEKDVDGVT PEKDVDGVTDINLGKLVRGDAHECFVSPVA K V L G K L 1 0 2 3 0 0 1 2 0 1 3 3 0 0 1 0 1 0 0 3 0 0 21 2 2237.2267 Q6UB35 Q6UB35 169 189 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 3 0.027992 46.099 By MS/MS 4 0 1 1 3446500 3446500 0 15270 1726 16189 38887 27459 27459 1 94087 0 VLNLEALK NLAPFSEVSADGEKRVLNLEALKQKRFPPA SADGEKRVLNLEALKQKRFPPATENFLYHL R V L L K Q 1 0 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 8 0 898.54877 Q8TCE6;Q6NSW5 Q8TCE6 326 333 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 2 0.018183 109.11 By MS/MS 7 0 1 1 718250 718250 0 15271 1688 16190 38888 27460 27460 1 12835 0 VLNLGQALER NILIVLTKILPWYPKVLNLGQALERRVHKI PWYPKVLNLGQALERRVHKICQEEKEKRPD K V L E R R 1 1 1 0 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 1 0 0 10 0 1111.635 Q8NI27 Q8NI27 1137 1146 THOC2 THO complex subunit 2 yes yes 2 0.0042727 109.83 By MS/MS 3 0 1 1 568050 568050 0 15272 1976 16191 38889 27461;27462 27462 2 14829 0 VLNNMEIGTSLFDEEGAK NEMIIGGGMAFTFLKVLNNMEIGTSLFDEE NMEIGTSLFDEEGAKIVKDLMSKAEKNGVK K V L A K I 1 0 2 1 0 0 3 2 0 1 2 1 1 1 0 1 1 0 0 1 0 0 18 0 1965.9354 P00558 P00558 247 264 PGK1 Phosphoglycerate kinase 1 yes yes 2 4.739E-11 168.93 By MS/MS 7 0 2 2 3800200 3800200 0 15273 432 16192;16193 38890;38891 27463;27464 27463 229 2 67910 0 VLNSLTQQEK LLTVIDSTEAHCQAKVLNSLTQQEKKETAR HCQAKVLNSLTQQEKKETARPSCEIVDGTR K V L E K K 0 0 1 0 0 2 1 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1158.6245 Q92538 Q92538 596 605 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 7.5821E-23 251.56 By MS/MS 2 0 1 1 1560100 1560100 0 15274 2055 16194 38892 27465 27465 1 77547 0 VLNSTVELAR TKDGTVQLGDFGIARVLNSTVELARTCIGT FGIARVLNSTVELARTCIGTPYYLSPEICE R V L A R T 1 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 10 0 1100.619 Q96PY6 Q96PY6 152 161 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.00082255 131.09 By MS/MS 3 0 1 1 376770 376770 0 15275 2240 16195 38893 27466 27466 1 9835.5 0 VLNTGSDVEEAVADALK ISQSSRLSSSVSAMRVLNTGSDVEEAVADA NTGSDVEEAVADALKKPARRRYESYGMHSD R V L L K K 3 0 1 2 0 0 2 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 17 0 1729.8734 O75122 O75122 591 607 CLASP2 CLIP-associating protein 2 yes yes 2 0.0001492 133.48 By MS/MS 3 0 1 1 263410 263410 0 15276 279 16196 38894 27467 27467 1 6876.3 0 VLNTNIDGR ______________________________ FQHILRVLNTNIDGRRKIAFAITAIKGVGR R V L G R R 0 1 2 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5302 P62269 P62269 15 23 RPS18 40S ribosomal protein S18 yes yes 2 2.9083E-06 160.59 By MS/MS By matching 8.22 1.75 1 1 1 1 2 3 8 1 18650000 18565000 84621 15277 1124 16197 38895;38896;38897;38898;38899;38900;38901;38902;38903 27468;27469;27470;27471;27472 27472 5 12381000 2170500 VLPGVDALSNI VSTGGGASLELLEGKVLPGVDALSNI____ LEGKVLPGVDALSNI_______________ K V L N I - 1 0 1 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1096.6128 P00558 P00558 407 417 PGK1 Phosphoglycerate kinase 1 yes yes 2 9.2048E-07 179.37 By MS/MS 8.33 1.25 1 1 1 3 8986500 8986500 0 15278 432 16198 38904;38905;38906 27473;27474;27475 27473 3 288890 0 VLPIKPADVEEPAVPQTPR QTRTVPQSQTQPLHKVLPIKPADVEEPAVP KPADVEEPAVPQTPRVASIQGRPQDTKPGV K V L P R V 2 1 0 1 0 1 2 0 0 1 1 1 0 0 5 0 1 0 0 3 0 0 19 1 2055.1364 Q96EV2 Q96EV2 930 948 RBM33 RNA-binding protein 33 yes yes 3 0.007031 73.11 By MS/MS 3 0 1 1 548090 548090 0 15279 2168 16199 38907 27476 27476 1 14308 0 VLPLEALVTDAGEVTEAGK HGLLEELKTVLSSHKVLPLEALVTDAGEVT EALVTDAGEVTEAGKAYVPPRVLQEALCVI K V L G K A 3 0 0 1 0 0 3 2 0 0 3 1 0 0 1 0 2 0 0 3 0 0 19 0 1911.0201 Q92616 Q92616 617 635 GCN1L1 Translational activator GCN1 yes yes 2;3 1.2717E-15 228.25 By MS/MS 2.86 0.833 3 2 2 7 1043400 1043400 0 15280 2068 16200 38908;38909;38910;38911;38912;38913;38914 27477;27478;27479;27480;27481;27482;27483 27480 7 47670 0 VLPSITTEILK LPRIFTSIGEDYDERVLPSITTEILKSVVA YDERVLPSITTEILKSVVARFDAGELITQR R V L L K S 0 0 0 0 0 0 1 0 0 2 2 1 0 0 1 1 2 0 0 1 0 0 11 0 1212.7329 P35232 P35232 118 128 PHB Prohibitin yes yes 2 0.037577 89.029 By MS/MS 8.5 1.12 1 1 1 1 4 42074000 42074000 0 15281 782 16201 38915;38916;38917;38918 27484 27484 1 3310400 0 VLPSIVNEVLK LPSMYQRLGLDYEERVLPSIVNEVLKSVVA YEERVLPSIVNEVLKSVVAKFNASQLITQR R V L L K S 0 0 1 0 0 0 1 0 0 1 2 1 0 0 1 1 0 0 0 3 0 0 11 0 1209.7333 Q99623 Q99623 132 142 PHB2 Prohibitin-2 yes yes 2 0.02825 92.051 By MS/MS By matching 8.33 0.471 2 1 2 1 8749000 8722700 26336 15282 2277 16202 38919;38920;38921 27485 27485 1 628190 224680 VLPTQPNPVDASR LQSLDLEFGSGFQPRVLPTQPNPVDASRAQ PRVLPTQPNPVDASRAQFFLHLSPSHYALL R V L S R A 1 1 1 1 0 1 0 0 0 0 1 0 0 0 3 1 1 0 0 2 0 0 13 0 1392.7361 Q8N766 Q8N766 276 288 EMC1 ER membrane protein complex subunit 1 yes yes 2 0.0029299 127.87 By MS/MS 1.5 0.5 1 1 2 572030 572030 0 15283 1931 16203 38922;38923 27486 27486 1 28121 0 VLQALEGLK MPSHFSRGSKSVARRVLQALEGLKMVEKDQ KSVARRVLQALEGLKMVEKDQDGGRKLTPQ R V L L K M 1 0 0 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 969.58588 P39019 P39019 103 111 RPS19 40S ribosomal protein S19 yes yes 2 0.0018913 123.86 By MS/MS By matching 10 0 2 1 1 8467000 8305100 161920 15284 823 16204 38924;38925 27487 27487 1 8827500 4153100 VLQALGSEPIQYAVPVVK LFISTRLGTDEISPRVLQALGSEPIQYAVP ALGSEPIQYAVPVVKYDRKGYKPRSRQLLL R V L V K Y 2 0 0 0 0 2 1 1 0 1 2 1 0 0 2 1 0 0 1 4 0 0 18 0 1910.0877 O00159 O00159 910 927 MYO1C Unconventional myosin-Ic yes yes 2 2.9973E-14 223.03 By MS/MS 3.5 0.5 1 1 2 2214100 2214100 0 15285 72 16205 38926;38927 27488 27488 1 60361 0 VLQAQGSSDPEEESVLYSNR GQYAEASALYGRALRVLQAQGSSDPEEESV GSSDPEEESVLYSNRAACHLKDGNCRDCIK R V L N R A 1 1 1 1 0 2 3 1 0 0 2 0 0 0 1 4 0 0 1 2 0 0 20 0 2207.0342 Q15785 Q15785 38 57 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2;3 8.8876E-63 337.86 By MS/MS 8.33 0.471 2 1 3 6278700 6278700 0 15286 1521 16206 38928;38929;38930 27489;27490 27489 2 490780 0 VLQATVVAVGSGSK VTKGGIMLPEKSQGKVLQATVVAVGSGSKG KVLQATVVAVGSGSKGKGGEIQPVSVKVGD K V L S K G 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 1 0 0 4 0 0 14 0 1314.7507 P61604 P61604 41 54 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 2 4.3219E-12 202.61 By MS/MS By MS/MS 10 0 2 1 1 4393200 4150500 242780 15287 1102 16207 38931;38932 27491;27492 27492 2 4411500 6227300 VLQDLVMDILR LDRLIELKEHPAHERVLQDLVMDILRVLST AHERVLQDLVMDILRVLSTPDLEVRKKTLQ R V L L R V 0 1 0 2 0 1 0 0 0 1 3 0 1 0 0 0 0 0 0 2 0 0 11 0 1313.7377 P53618 P53618 317 327 COPB1 Coatomer subunit beta yes yes 2 0.00075579 132.25 By MS/MS 4.75 0.829 2 1 1 4 1950200 1950200 0 15288 1004 16208;16209 38933;38934;38935;38936 27493;27494;27495 27494 776 3 47060 0 VLQDWNALK HDLEPPRFAQLALERVLQDWNALKSMIMFG QLALERVLQDWNALKSMIMFGSQENKDPLS R V L L K S 1 0 1 1 0 1 0 0 0 0 2 1 0 0 0 0 0 1 0 1 0 0 9 0 1085.5869 O95071 O95071 1332 1340 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.00061321 159.28 By MS/MS 1.5 0.5 1 1 2 1150700 1150700 0 15289 364 16210 38937;38938 27496;27497 27496 2 56682 0 VLQGDLVMNVYR SHVPEVDPGSAELQKVLQGDLVMNVYRDGA LQKVLQGDLVMNVYRDGAWGAFRHFLLEED K V L Y R D 0 1 1 1 0 1 0 1 0 0 2 0 1 0 0 0 0 0 1 3 0 0 12 0 1405.7388 P49327 P49327 1496 1507 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 4.9957E-11 199.33 By MS/MS 2.5 0.957 1 2 2 1 6 16004000 16004000 0 15290 915 16211;16212 38939;38940;38941;38942;38943;38944 27498;27499;27500;27501;27502;27503 27501 665 6 661420 0 VLQHAASNK QINSDQRRNLGSVAKVLQHAASNKLFEGEN LGSVAKVLQHAASNKLFEGENEHLSSMNNY K V L N K L 2 0 1 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 966.52468 Q13576 Q13576 1144 1152 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 7.4942E-05 172.25 By MS/MS 3.5 0.5 1 1 2 342870 342870 0 15291 1383 16213 38945;38946 27504 27504 1 9048.6 0 VLQLMLR KDFTKQKYPEHAIHKVLQLMLRRGEIQHRM YPEHAIHKVLQLMLRRGEIQHRMQRKVLYR K V L L R R 0 1 0 0 0 1 0 0 0 0 3 0 1 0 0 0 0 0 0 1 0 0 7 0 871.53134 P33992 P33992 711 717 MCM5 DNA replication licensing factor MCM5 yes yes 2 0.031349 114.02 By MS/MS 5 0 1 1 420050 420050 0 15292 774 16214 38947 27505 27505 1 17266 0 VLQLYPNNK LAVNDFELARADFQKVLQLYPNNKAAKTQL RADFQKVLQLYPNNKAAKTQLAVCQQRIRR K V L N K A 0 0 2 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 9 0 1087.6026 Q02790 Q02790 379 387 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.00094829 151.29 By MS/MS By matching 6.33 0.471 2 1 2 1 15578000 15553000 25233 15293 1255 16215 38948;38949;38950 27506 27506 1 124880 77387 VLQNIIK LYQKTACHKAVVNEKVLQNIIKTLRVPLSL HKAVVNEKVLQNIIKTLRVPLSLKYSCPSE K V L I K T 0 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 7 0 826.52764 Q7Z3U7 Q7Z3U7 1435 1441 MON2 Protein MON2 homolog yes yes 2 0.017188 134.12 By MS/MS 3 0 1 1 663520 663520 0 15294 1786 16216 38951 27507 27507 1 17321 0 VLQPTVFPVVPR GFFQGDIRLLMDDLKVLQPTVFPVVPRLLN DLKVLQPTVFPVVPRLLNRMFDRIFGQANT K V L P R L 0 1 0 0 0 1 0 0 0 0 1 0 0 1 3 0 1 0 0 4 0 0 12 0 1350.8024 P33121 P33121 357 368 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 2 0.010804 96.113 By MS/MS 6 0.816 1 1 1 3 2958400 2958400 0 15295 766 16217 38952;38953;38954 27508 27508 1 101310 0 VLQQGDIGECAEPYMIFK TYPSQDVFLVIKLEKVLQQGDIGECAEPYM QGDIGECAEPYMIFKEADATKNKEKLEKLK K V L F K E 1 0 0 1 1 2 2 2 0 2 1 1 1 1 1 0 0 0 1 1 0 0 18 0 2096.9911 Q96N67 Q96N67 349 366 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 1.0512E-07 155.09 By MS/MS 2.5 0.5 1 1 2 394260 394260 0 15296 2230 16218 38955;38956 27509 27509 1411 1 15883 0 VLQSDEYEEVEDK IAVDMTQHLAEIFGKVLQSDEYEEVEDKTV GKVLQSDEYEEVEDKTVMAMGILHTIDTIL K V L D K T 0 0 0 2 0 1 4 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 13 0 1581.7046 O15397 O15397 592 604 IPO8 Importin-8 yes yes 2 8.4452E-05 156 By MS/MS 4 0 1 1 670890 670890 0 15297 175 16219 38957 27510 27510 1 18315 0 VLQSFTVDSSK VKIAGPGLGSGVRARVLQSFTVDSSKAGLA VRARVLQSFTVDSSKAGLAPLEVRVLGPRG R V L S K A 0 0 0 1 0 1 0 0 0 0 1 1 0 1 0 3 1 0 0 2 0 0 11 0 1209.6241 O75369 O75369 1439 1449 FLNB Filamin-B yes yes 2 0.00032297 149.94 By MS/MS 2.5 0.5 1 1 2 688930 688930 0 15298 300 16220 38958;38959 27511 27511 1 30278 0 VLQWSDYEIVR SKHYKSTVGVDFALKVLQWSDYEIVRLQLW FALKVLQWSDYEIVRLQLWDIAGQERFTSM K V L V R L 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 2 0 0 11 0 1406.7194 O14966 O14966 48 58 RAB29 Ras-related protein Rab-7L1 yes yes 2 0.0049868 107.79 By MS/MS 9 0 1 1 123650 123650 0 15299 138 16221 38960 27512 27512 1 70962 0 VLRPQVTAVAQQNQGEVPEPQDMK KFRRQHEQLRAVIVRVLRPQVTAVAQQNQG AQQNQGEVPEPQDMKVAEVLFDAADANAIE R V L M K V 2 1 1 1 0 5 2 1 0 0 1 1 1 0 3 0 1 0 0 4 0 0 24 1 2661.3544 Q14204 Q14204 483 506 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 3 0.0013787 72.676 By MS/MS 2 0.816 1 1 1 3 3971700 3971700 0 15300 1421 16222 38961;38962;38963 27513 27513 1121 1 185340 0 VLSAPPHFHFGQTNR FKALIAAQYSGAQVRVLSAPPHFHFGQTNR VLSAPPHFHFGQTNRTPEFLRKFPAGKVPA R V L N R T 1 1 1 0 0 1 0 1 2 0 1 0 0 2 2 1 1 0 0 1 0 0 15 0 1706.8641 P26641 P26641 31 45 EEF1G Elongation factor 1-gamma yes yes 3 0.0031739 101.45 By MS/MS 6 0 1 1 9357400 9357400 0 15301 700 16223 38964 27514 27514 1 72969 0 VLSDVDAFIAYVGTDQK MAPVASIWLSQDMHRVLSDVDAFIAYVGTD SDVDAFIAYVGTDQKSCDPGLEDPCGLNRA R V L Q K S 2 0 0 3 0 1 0 1 0 1 1 1 0 1 0 1 1 0 1 3 0 0 17 0 1839.9254 Q9HAV4 Q9HAV4 688 704 XPO5 Exportin-5 yes yes 2 1.8076E-07 155.98 By MS/MS 3.5 0.5 1 1 2 229360 229360 0 15302 2546 16224 38965;38966 27515;27516 27515 2 6080.7 0 VLSEAAISASLEK EELCNSCEMENEVLKVLSEAAISASLEKFE LKVLSEAAISASLEKFEIPVKIRLSPEPWT K V L E K F 3 0 0 0 0 0 2 0 0 1 2 1 0 0 0 3 0 0 0 1 0 0 13 0 1316.7187 O95573 O95573 661 673 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 2 0.00041124 138.63 By MS/MS 4.5 0.5 1 1 2 2297800 2297800 0 15303 400 16225 38967;38968 27517 27517 1 91068 0 VLSECSPLMNDIFNK PITDDDVDRISLCLKVLSECSPLMNDIFNK VLSECSPLMNDIFNKECRQSLSHMLSAKLE K V L N K E 0 0 2 1 1 0 1 0 0 1 2 1 1 1 1 2 0 0 0 1 0 0 15 0 1765.8379 P53618 P53618 619 633 COPB1 Coatomer subunit beta yes yes 2 1.2264E-20 219.92 By MS/MS 4.2 0.748 1 2 2 5 2234500 2234500 0 15304 1004 16226;16227 38969;38970;38971;38972;38973 27518;27519 27518 777 2 64234 0 VLSECSPLMNDIFNKECR PITDDDVDRISLCLKVLSECSPLMNDIFNK ECSPLMNDIFNKECRQSLSHMLSAKLEEEK K V L C R Q 0 1 2 1 2 0 2 0 0 1 2 1 1 1 1 2 0 0 0 1 0 0 18 1 2211.0122 P53618 P53618 619 636 COPB1 Coatomer subunit beta yes yes 3 0.02494 61.186 By MS/MS 4.5 0.5 1 1 2 1777800 1777800 0 15305 1004 16228 38974;38975 27520 27520 777 1 52785 0 VLSEDAIR VDASKSIEAVHEDIRVLSEDAIRTATEKPL AVHEDIRVLSEDAIRTATEKPLGELWK___ R V L I R T 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 901.4869 P23919 P23919 193 200 DTYMK Thymidylate kinase yes yes 2 0.0059394 133.6 By MS/MS 9 0 1 1 2514100 2514100 0 15306 675 16229 38976 27521 27521 1 1442800 0 VLSFDIECAGR SHPPEGPWQRIAPLRVLSFDIECAGRKGIF APLRVLSFDIECAGRKGIFPEPERDPVIQI R V L G R K 1 1 0 1 1 0 1 1 0 1 1 0 0 1 0 1 0 0 0 1 0 0 11 0 1265.6074 P28340 P28340 312 322 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.0033023 114.86 By MS/MS 3 0 1 1 1140700 1140700 0 15307 719 16230 38977 27522 27522 1 29777 0 VLSFIPPDGNFR SFHPCIRFKRWESERVLSFIPPDGNFRLIS SERVLSFIPPDGNFRLISYRVSSQNLVAIP R V L F R L 0 1 1 1 0 0 0 1 0 1 1 0 0 2 2 1 0 0 0 1 0 0 12 0 1360.7139 Q9Y2T2 Q9Y2T2 247 258 AP3M1 AP-3 complex subunit mu-1 yes yes 2 0.03352 79.489 By MS/MS 7 0 1 1 949820 949820 0 15308 2901 16231 38978 27523 27523 1 16973 0 VLSGDLGQLPTGIR SPLGWPSCRSIQTLRVLSGDLGQLPTGIRD RVLSGDLGQLPTGIRDFVEHSARLCQPEGI R V L I R D 0 1 0 1 0 1 0 3 0 1 3 0 0 0 1 1 1 0 0 1 0 0 14 0 1424.7987 Q16822 Q16822 32 45 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 3.2906E-18 225.79 By MS/MS 6.5 1.12 1 1 1 1 4 5169300 5169300 0 15309 1550 16232 38979;38980;38981;38982 27524 27524 1 108240 0 VLSGISFEVPAGK VAFDNVHFEYIEGQKVLSGISFEVPAGKKV QKVLSGISFEVPAGKKVAIVGGSGSGKSTI K V L G K K 1 0 0 0 0 0 1 2 0 1 1 1 0 1 1 2 0 0 0 2 0 0 13 0 1302.7184 O75027 O75027 487 499 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes yes 2 3.737E-06 175.49 By MS/MS 1.5 0.5 1 1 2 351420 351420 0 15310 276 16233 38983;38984 27525 27525 1 17232 0 VLSGTIHAGQPVK MYSTDDGVQFHAFGRVLSGTIHAGQPVKVL GRVLSGTIHAGQPVKVLGENYTLEDEEDSQ R V L V K V 1 0 0 0 0 1 0 2 1 1 1 1 0 0 1 1 1 0 0 2 0 0 13 0 1305.7405 Q15029 Q15029 496 508 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 0.00029051 166.69 By MS/MS 4.5 1.12 1 1 1 1 4 2090800 2090800 0 15311 1466 16234 38985;38986;38987;38988 27526 27526 1 45777 0 VLSHSSK VLAGTVCDFRLSYGRVLSHSSKIIIVNRNR DFRLSYGRVLSHSSKIIIVNRNREEMLLNS R V L S K I 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 3 0 0 0 1 0 0 7 0 756.413 A1L0T0 A1L0T0 363 369 ILVBL Acetolactate synthase-like protein yes yes 2 0.017299 133.81 By MS/MS 6 0 1 1 1514500 1514500 0 15312 8 16235 38989 27527 27527 1 11810 0 VLSIGDGIAR ILGADTSVDLEETGRVLSIGDGIARVHGLR EETGRVLSIGDGIARVHGLRNVQAEEMVEF R V L A R V 1 1 0 1 0 0 0 2 0 2 1 0 0 0 0 1 0 0 0 1 0 0 10 0 999.57129 P25705 P25705 74 83 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.00057893 177.3 By MS/MS By matching 7.25 1.48 4 1 1 1 1 6 2 14354000 13023000 1331100 15313 687 16236 38990;38991;38992;38993;38994;38995;38996;38997 27528;27529;27530;27531;27532 27528 5 889440 4082500 VLSIGLPVAR PSESTWKLAVSSLLRVLSIGLPVARQHASS SSLLRVLSIGLPVARQHASSGKFDSMWPEL R V L A R Q 1 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 0 0 10 0 1023.6441 Q7Z3U7 Q7Z3U7 1469 1478 MON2 Protein MON2 homolog yes yes 2 0.0007865 132.76 By MS/MS 4 0.816 1 1 1 3 1057900 1057900 0 15314 1786 16237 38998;38999;39000 27533 27533 1 29650 0 VLSLDTNITNQVNK LLNNPALEFIKYVCKVLSLDTNITNQVNKL KVLSLDTNITNQVNKLNRDLLRLVDVGEFS K V L N K L 0 0 3 1 0 1 0 0 0 1 2 1 0 0 0 1 2 0 0 2 0 0 14 0 1557.8362 Q07864 Q07864 2111 2124 POLE DNA polymerase epsilon catalytic subunit A yes yes 2 5.3404E-12 199.82 By MS/MS 1.5 0.5 1 1 2 310630 310630 0 15315 1283 16238 39001;39002 27534 27534 1 15381 0 VLSLVDDPR LWLTKTKLIEGLPEKVLSLVDDPRNHIENQ EGLPEKVLSLVDDPRNHIENQDECVLNVIS K V L P R N 0 1 0 2 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 9 0 1012.5553 Q9BZE1 Q9BZE1 136 144 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 0.0016239 133.86 By MS/MS 7.5 0.5 1 1 2 4455100 4455100 0 15316 2420 16239 39003;39004 27535 27535 1 88575 0 VLSNTTTTTK NSADLLRWTTATTMKVLSNTTTTTKAVLQA ATTMKVLSNTTTTTKAVLQAVSDGQWWKKS K V L T K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 5 0 0 1 0 0 10 0 1064.5714 A2RRP1 A2RRP1 1417 1426 NBAS Neuroblastoma-amplified sequence yes yes 2 0.0041022 110.39 By MS/MS 2 0.816 1 1 1 3 427590 427590 0 15317 10 16240 39005;39006;39007 27536 27536 1 18863 0 VLSPQDQDVQDNPR SMRRAPLMWELIHKKVLSPQDQDVQDNPRG KVLSPQDQDVQDNPRGRSAKLRAAIKL___ K V L P R G 0 1 1 3 0 3 0 0 0 0 1 0 0 0 2 1 0 0 0 2 0 0 14 0 1609.7696 A6NJ78 A6NJ78 382 395 METTL15 Probable methyltransferase-like protein 15 yes yes 2 2.1379E-05 158.86 By MS/MS 7 0 1 1 3723800 3723800 0 15318 24 16241 39008 27537 27537 1 66545 0 VLSQEEPDSAR ______________________________ ______________________________ M V L A R G 1 1 0 1 0 1 2 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 11 0 1229.5888 Q8TF71 Q8TF71 2 12 SLC16A10 Monocarboxylate transporter 10 yes yes 2 0.0015913 125.74 By MS/MS 1.5 0.5 1 1 2 559720 559720 0 15319 2008 16242 39009;39010 27538;27539 27539 2 27483 0 VLSQQAASVVK VKAGGSRQDCHEKIRVLSQQAASVVKQEGG EKIRVLSQQAASVVKQEGGDNDLIERIQVD R V L V K Q 2 0 0 0 0 2 0 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 0 1128.6503 P30566 P30566 405 415 ADSL Adenylosuccinate lyase yes yes 2 3.7194E-05 185.96 By MS/MS 7 0.816 1 1 1 3 11659000 11659000 0 15320 744 16243 39011;39012;39013 27540 27540 1 105450 0 VLSRPNAQELPSMYQR PTGSKDLQMVNISLRVLSRPNAQELPSMYQ LSRPNAQELPSMYQRLGLDYEERVLPSIVN R V L Q R L 1 2 1 0 0 2 1 0 0 0 2 0 1 0 2 2 0 0 1 1 0 0 16 1 1887.9625 Q99623 Q99623 108 123 PHB2 Prohibitin-2 yes yes 3 0.021579 65.374 By matching By MS/MS 8 0 2 1 1 16172000 15828000 344240 15321 2277 16244 39014;39015 27541 27541 1431 1 1044100 2936800 VLSSIEQK VAYKNVVGGQRAAWRVLSSIEQKSNEEGSE GQRAAWRVLSSIEQKSNEEGSEEKGPEVRE R V L Q K S 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 8 0 902.5073 P31947 P31947 61 68 SFN 14-3-3 protein sigma yes yes 2 0.012661 116.25 By MS/MS By matching 8 0 2 1 1 21460000 21337000 123080 15322 761 16245 39016;39017 27542 27542 1 1407600 1050100 VLSTPDLEVR AHERVLQDLVMDILRVLSTPDLEVRKKTLQ MDILRVLSTPDLEVRKKTLQLALDLVSSRN R V L V R K 0 1 0 1 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 2 0 0 10 0 1127.6186 P53618 P53618 328 337 COPB1 Coatomer subunit beta yes yes 2 0.0092866 99.815 By MS/MS 5 0.707 1 2 1 4 35840000 35840000 0 15323 1004 16246 39018;39019;39020;39021 27543;27544 27544 2 1065200 0 VLSTVHTHSSVK LSLLVLHRLLCEHFRVLSTVHTHSSVKSVP HFRVLSTVHTHSSVKSVPENLLKCFGEQNK R V L V K S 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 3 2 0 0 3 0 0 12 0 1293.7041 Q13155 Q13155 148 159 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 2 2.516E-05 172.98 By MS/MS 7.5 0.5 1 1 2 622630 622630 0 15324 1342 16247 39022;39023 27545;27546 27546 2 11127 0 VLTEFTR MLVSGDLNAVHGAMRVLTEFTREVTDTQMP NAVHGAMRVLTEFTREVTDTQMPLVAPVIL R V L T R E 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 1 0 0 7 0 864.47052 Q96P70 Q96P70 169 175 IPO9 Importin-9 yes yes 2 0.049261 101.64 By MS/MS 3.5 0.5 1 1 2 1033700 1033700 0 15325 2237 16248 39024;39025 27547 27547 1 28029 0 VLTFDLTKYPDANPNPNEQ LIGVYPEQGDCVISKVLTFDLTKYPDANPN DLTKYPDANPNPNEQ_______________ K V L E Q - 1 0 3 2 0 1 1 0 0 0 2 1 0 1 3 0 2 0 1 1 0 0 19 1 2175.0484 Q14683 Q14683 1215 1233 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2;3 1.8515E-14 193.45 By MS/MS 3 0 2 2 3031500 3031500 0 15326 1440 16249 39026;39027 27548;27549 27548 2 79136 0 VLTGVAGEDAECHAAK SDTKYLEMIYSMCKKVLTGVAGEDAECHAA LTGVAGEDAECHAAKLLEVIILQCKGRGID K V L A K L 4 0 0 1 1 0 2 2 1 0 1 1 0 0 0 0 1 0 0 2 0 0 16 0 1626.7672 O95373 O95373 725 740 IPO7 Importin-7 yes yes 2 1.2606E-07 207.34 By MS/MS 4 0 1 1 864320 864320 0 15327 388 16250 39028 27550 27550 1 23595 0 VLTIDPTEFK KGNNVYCLDRECRPRVLTIDPTEFKFKLAL ECRPRVLTIDPTEFKFKLALINRKYDEVLH R V L F K F 0 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 2 0 0 1 0 0 10 0 1161.6281 P53621 P53621 589 598 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00095555 124.92 By MS/MS 2.5 1.12 1 1 1 1 4 12892000 12892000 0 15328 1005 16251 39029;39030;39031;39032 27551;27552;27553 27552 3 420050 0 VLTLSDDLER EAQRRRMDEISDHAKVLTLSDDLERTIEER SDHAKVLTLSDDLERTIEERVNILFDFVKK K V L E R T 0 1 0 2 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 10 0 1159.6085 P55010 P55010 225 234 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.010439 99.013 By MS/MS 6.5 0.5 1 1 2 6812300 6812300 0 15329 1021 16252 39033;39034 27554 27554 1 56646 0 VLTMPETCR QLLDNPARVMPAQLKVLTMPETCRYQPFKP MPAQLKVLTMPETCRYQPFKPLSIGGIIIL K V L C R Y 0 1 0 0 1 0 1 0 0 0 1 0 1 0 1 0 2 0 0 1 0 0 9 0 1105.526 Q99460 Q99460 891 899 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.030024 91.069 By MS/MS 4 0 1 1 997350 997350 0 15330 2268 16253 39035 27555 27555 1 27226 0 VLTPELYAELR DEFPDLSAHNNHMAKVLTPELYAELRAKST HMAKVLTPELYAELRAKSTPSGFTLDDVIQ K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 P12277 P12277 33 43 CKB Creatine kinase B-type yes yes 2 0.00077696 136.63 By MS/MS 8.5 1.12 1 1 1 1 4 26421000 26421000 0 15331 565 16254 39036;39037;39038;39039 27556;27557 27556 2 959200 0 VLTQPSQSAVR CATLEENINSALDIKVLTQPSQSAVRGGPG LDIKVLTQPSQSAVRGGPGRSTMPTPGNTA K V L V R G 1 1 0 0 0 2 0 0 0 0 1 0 0 0 1 2 1 0 0 2 0 0 11 0 1184.6513 Q9UP83 Q9UP83 299 309 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 2 0.00057343 144.77 By MS/MS 4 0 1 1 1984900 1984900 0 15332 2850 16255 39040 27558 27558 1 54186 0 VLTSGIFETK QADYVPSDQDLLRCRVLTSGIFETKFQVDK LLRCRVLTSGIFETKFQVDKVNFHMFDVGG R V L T K F 0 0 0 0 0 0 1 1 0 1 1 1 0 1 0 1 2 0 0 1 0 0 10 0 1093.6019 P63092;Q5JWF2 P63092 202 211 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.0001244 162.88 By MS/MS 7.5 0.5 1 1 2 5549900 5549900 0 15333 1168 16256 39041;39042 27559 27559 1 111420 0 VLTTTALSTVSSGVQR VSQSQPGSRSGSPGRVLTTTALSTVSSGVQ LTTTALSTVSSGVQRVLVNSASAQKRSKIP R V L Q R V 1 1 0 0 0 1 0 1 0 0 2 0 0 0 0 3 4 0 0 3 0 0 16 0 1618.889 O75122 O75122 467 482 CLASP2 CLIP-associating protein 2 yes yes 2 2.5717E-07 198.32 By MS/MS 3.5 0.5 1 1 2 1530400 1530400 0 15334 279 16257 39043;39044 27560 27560 1 40285 0 VLTVINQTQK SKLSKIRVVRKSIARVLTVINQTQKENLRK KSIARVLTVINQTQKENLRKFYKGKKYKPL R V L Q K E 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 2 0 0 2 0 0 10 0 1142.6659 P42766 P42766 57 66 RPL35 60S ribosomal protein L35 yes yes 2 0.00014256 160.82 By MS/MS By matching 9.33 0.471 2 1 2 1 1840800 1760500 80337 15335 856 16258 39045;39046;39047 27561 27561 1 1129500 865810 VLVALASEELAK NSGGFLSKDKGLLGKVLVALASEELAKGWT LGKVLVALASEELAKGWTQWYDLTEDGTRP K V L A K G 3 0 0 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 12 0 1241.7231 A0FGR8 A0FGR8 891 902 ESYT2 Extended synaptotagmin-2 yes yes 2 9.9734E-08 192.64 By MS/MS 4.5 0.5 1 1 2 1457800 1457800 0 15336 6 16259 39048;39049 27562 27562 1 41203 0 VLVAQHDVYK DKVAQDLCKVAGIAKVLVAQHDVYKGLLPE AGIAKVLVAQHDVYKGLLPEELTPLILATQ K V L Y K G 1 0 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 3 0 0 10 0 1170.6397 P13804 P13804 76 85 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 2 0.00039842 148.94 By MS/MS 8 0 1 1 2191100 2191100 0 15337 582 16260 39050 27563 27563 1 144550 0 VLVAVGNGK VFTMTAKEGRKKSIRVLVAVGNGKGAAGFS RKKSIRVLVAVGNGKGAAGFSIGKATDRMD R V L G K G 1 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 3 0 0 9 0 855.5178 P82675 P82675 243 251 MRPS5 28S ribosomal protein S5, mitochondrial yes yes 2 0.042101 84.244 By MS/MS 7 0 1 1 2457300 2457300 0 15338 1205 16261 39051 27564 27564 1 43912 0 VLVDGEEHVGFLK VVPGVKPQDWISAARVLVDGEEHVGFLKTD ARVLVDGEEHVGFLKTDGSFVVHDIPSGSY R V L L K T 0 0 0 1 0 0 2 2 1 0 2 1 0 1 0 0 0 0 0 3 0 0 13 0 1440.7613 Q9NPA0 Q9NPA0 67 79 EMC7 ER membrane protein complex subunit 7 yes yes 2;3 1.6864E-05 155 By MS/MS 9 0 2 2 2984200 2984200 0 15339 2579 16262 39052;39053 27565;27566 27566 2 1712700 0 VLVDMSRVQDDEVGDGTTSVTVLAAELLR ATILKNIGVDNPAAKVLVDMSRVQDDEVGD DGTTSVTVLAAELLREAESLIAKKIHPQTI K V L L R E 2 2 0 4 0 1 2 2 0 0 4 0 1 0 0 2 3 0 0 6 0 0 29 1 3087.5758 P78371 P78371 83 111 CCT2 T-complex protein 1 subunit beta yes yes 3 2.3058E-05 73.936 By MS/MS 6 0 1 1 464600 464600 0 15340 1195 16263 39054 27567 27567 951 1 3623 0 VLVDQTTGLSR VEDMFSRFGRIINSRVLVDQTTGLSRGVAF INSRVLVDQTTGLSRGVAFIRFDKRSEAEE R V L S R G 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 1 2 0 0 2 0 0 11 0 1187.651 Q15717 Q15717 137 147 ELAVL1 ELAV-like protein 1 yes yes 2 0.00012478 158.08 By MS/MS 7.5 0.5 1 1 2 4128700 4128700 0 15341 1514 16264 39055;39056 27568 27568 1 220980 0 VLVDSLVEDDR QQQWLLYLSNSGYLKVLVDSLVEDDRTLQS GYLKVLVDSLVEDDRTLQSLLTPQPPLLKA K V L D R T 0 1 0 3 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 3 0 0 11 0 1258.6405 Q92621 Q92621 1524 1534 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.00020231 154.85 By MS/MS 2.5 0.5 1 1 2 1044800 1044800 0 15342 2070 16265 39057;39058 27569 27569 1 44059 0 VLVDVPCTTDR DGRKWGELEGDTYDRVLVDVPCTTDRHSLH TYDRVLVDVPCTTDRHSLHEEENNIFKRSR R V L D R H 0 1 0 2 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 3 0 0 11 0 1273.6336 Q96CB9 Q96CB9 252 262 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 yes yes 2 0.050957 76.465 By MS/MS 7 0 1 1 1812200 1812200 0 15343 2137 16266 39059 27570 27570 1 32384 0 VLVEGPLNNLR QPLWNHLLNYYKEQKVLVEGPLNNLRESLM KEQKVLVEGPLNNLRESLMQFSKPRKLVNT K V L L R E 0 1 2 0 0 0 1 1 0 0 3 0 0 0 1 0 0 0 0 2 0 0 11 0 1222.7034 Q92900 Q92900 908 918 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.001402 128.27 By MS/MS 3.5 0.5 1 1 2 1572700 1572700 0 15344 2088 16267 39060;39061 27571 27571 1 41239 0 VLVEQQQDR LAEALLSGDLEKFSRVLVEQQQDRARREQE LEKFSRVLVEQQQDRARREQERIRLFSADP R V L D R A 0 1 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 9 0 1113.5778 Q5TDH0 Q5TDH0 174 182 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0006374 150.27 By MS/MS 6.5 0.5 1 1 2 3297100 3297100 0 15345 1639 16268 39062;39063 27572;27573 27572 2 29532 0 VLVFNPEEPDGGFPGLK LDSQRRPVVQVVDERVLVFNPEEPDGGFPG VFNPEEPDGGFPGLKWGGTHDGPKKKGKDL R V L L K W 0 0 1 1 0 0 2 3 0 0 2 1 0 2 3 0 0 0 0 2 0 0 17 0 1813.9251 Q86Y91 Q86Y91 37 53 KIF18B Kinesin-like protein KIF18B yes yes 2 0.0049408 119.69 By MS/MS 4.5 0.5 1 1 2 361870 361870 0 15346 1847 16269 39064;39065 27574 27574 1 10508 0 VLVHPPQDGEDEPTLVQK YMSPMEAQEFGILDKVLVHPPQDGEDEPTL HPPQDGEDEPTLVQKEPVEAAPAAEPVPAS K V L Q K E 0 0 0 2 0 2 2 1 1 0 2 1 0 0 3 0 1 0 0 3 0 0 18 0 2000.0215 Q16740 Q16740 244 261 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 3 0.0031398 95.197 By MS/MS 8 0 1 1 1950900 1950900 0 15347 1545 16270 39066 27575 27575 1 128700 0 VLVLGDSGVGK ______________________________ DRVKVLVLGDSGVGKSSLVHLLCQNQVLGN K V L G K S 0 0 0 1 0 0 0 3 0 0 2 1 0 0 0 1 0 0 0 3 0 0 11 0 1042.6023 Q5HYI8 Q5HYI8 9 19 RABL3 Rab-like protein 3 yes yes 2 0.0011668 153.05 By MS/MS By matching 8.75 0.829 2 1 1 3 1 10764000 10744000 19211 15348 1601 16271 39067;39068;39069;39070 27576;27577;27578 27578 3 1339600 163900 VLVMLAAQSR CLELVEHFGPNELRKVLVMLAAQSRRSVPL NELRKVLVMLAAQSRRSVPLLRAISYHLVQ K V L S R R 2 1 0 0 0 1 0 0 0 0 2 0 1 0 0 1 0 0 0 2 0 0 10 0 1086.6219 Q969Z0 Q969Z0 261 270 TBRG4 Protein TBRG4 yes yes 2 0.00080677 142.92 By MS/MS 6 0 1 1 1654400 1654400 0 15349 2112 16272 39071 27579 27579 1 12901 0 VLVNDAQK MAILQIMKELNKRGRVLVNDAQKVTEGQQE ELNKRGRVLVNDAQKVTEGQQERLERQHWT R V L Q K V 1 0 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 885.49198 Q13263 Q13263 312 319 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0090006 122.18 By MS/MS By matching 4.33 0.471 2 1 2 1 14399000 14267000 132370 15350 1351 16273 39072;39073;39074 27580;27581 27580 2 415430 276600 VLVNDAQKVTEGQQER MAILQIMKELNKRGRVLVNDAQKVTEGQQE LVNDAQKVTEGQQERLERQHWTMTKIQKHQ R V L E R L 1 1 1 1 0 3 2 1 0 0 1 1 0 0 0 0 1 0 0 3 0 0 16 1 1812.933 Q13263 Q13263 312 327 TRIM28 Transcription intermediary factor 1-beta yes yes 2;3 3.1329E-14 227.92 By MS/MS By MS/MS 5.38 1.22 3 1 2 2 7 1 13934000 13825000 108820 15351 1351 16274 39075;39076;39077;39078;39079;39080;39081;39082 27582;27583;27584 27583 3 347530 227390 VLVQNAAGSQEK EGILKTAKVLVEDTKVLVQNAAGSQEKLAQ DTKVLVQNAAGSQEKLAQAAQSSVATITRL K V L E K L 2 0 1 0 0 2 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1242.6568 Q9Y490 Q9Y490 2032 2043 TLN1 Talin-1 yes yes 2 1.0836E-34 270.63 By MS/MS 3.5 1.12 1 1 1 1 4 7176500 7176500 0 15352 2947 16275 39083;39084;39085;39086 27585;27586;27587 27586 3 316330 0 VLVSPTNPPGATSSCQK AQKVTNLHLMLQLVRVLVSPTNPPGATSSC VSPTNPPGATSSCQKAMFQCGLLQQLCTIL R V L Q K A 1 0 1 0 1 1 0 1 0 0 1 1 0 0 3 3 2 0 0 2 0 0 17 0 1741.8669 O60763 O60763 289 305 USO1 General vesicular transport factor p115 yes yes 2 2.6973E-10 159.58 By MS/MS 4 0 1 1 658060 658060 0 15353 264 16276 39087 27588 27588 1 17964 0 VLVVGDAAVGK ______________________________ HLFKVLVVGDAAVGKTSLVQRYSQDSFSKH K V L G K T 2 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 4 0 0 11 0 1026.6073 O14966 O14966 10 20 RAB29 Ras-related protein Rab-7L1 yes yes 2 0.010545 96.342 By MS/MS 9 0 1 1 0 0 0 15354 138 16277 39088 27589 27589 1 0 0 VLVVHDGFEGLAK AVRSTVRIGLIQGNRVLVVHDGFEGLAKGQ NRVLVVHDGFEGLAKGQIEEAGWSYVGGWT R V L A K G 1 0 0 1 0 0 1 2 1 0 2 1 0 1 0 0 0 0 0 3 0 0 13 0 1382.7558 P08237 P08237 433 445 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 2 0.0017227 120.06 By MS/MS 5.5 0.5 1 1 2 2102800 2102800 0 15355 500 16278 39089;39090 27590 27590 1 42000 0 VLWLSGLSEPGAAR ______________________________ RVLWLSGLSEPGAARQPRIMEEKALEVYDL R V L A R Q 2 1 0 0 0 0 1 2 0 0 3 0 0 0 1 2 0 1 0 1 0 0 14 0 1454.7882 Q9H5X1 Q9H5X1 15 28 FAM96A MIP18 family protein FAM96A yes yes 2 0.0077421 98.156 By MS/MS 10 0 1 1 42449 42449 0 15356 2507 16279 39091 27591 27591 1 45119 0 VLYDFVMDDTISPYSR AEYYDNLPHYNSWIKVLYDFVMDDTISPYS LYDFVMDDTISPYSRMKRHQKGEMVLE___ K V L S R M 0 1 0 3 0 0 0 0 0 1 1 0 1 1 1 2 1 0 2 2 0 0 16 0 1919.8975 O15121 O15121 296 311 DEGS1 Sphingolipid delta(4)-desaturase DES1 yes yes 2 4.7915E-06 133.88 By MS/MS 8 0 1 1 0 0 0 15357 150 16280 39092 27592 27592 93 1 0 0 VLYNLEVLSSK ESLFRSFAPGMSTFRVLYNLEVLSSKLMPT STFRVLYNLEVLSSKLMPTADDDMARSCAK R V L S K L 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 1 2 0 0 11 0 1263.7075 Q9UPU5 Q9UPU5 1174 1184 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 5.0079E-05 169.37 By MS/MS 2 0.816 1 1 1 3 645510 645510 0 15358 2854 16281 39093;39094;39095 27593;27594;27595 27595 3 25015 0 VLYPNDNFFEGK IQAVLDRNLAENISRVLYPNDNFFEGKELR ISRVLYPNDNFFEGKELRLKQEYFVVAATL R V L G K E 0 0 2 1 0 0 1 1 0 0 1 1 0 2 1 0 0 0 1 1 0 0 12 0 1441.6878 P06737;P11217;P11216 P06737 279 290 PYGL;PYGM;PYGB Glycogen phosphorylase, liver form;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form yes no 2 0.0093084 97.779 By MS/MS 4.5 0.5 1 1 2 1425600 1425600 0 15359 483 16282 39096;39097 27596 27596 1 41512 0 VLYSNMLGEENTYLWR SMQGLCKFGFYEVFKVLYSNMLGEENTYLW LYSNMLGEENTYLWRTSLYLAASASAEFFA K V L W R T 0 1 2 0 0 0 2 1 0 0 3 0 1 0 0 1 1 1 2 1 0 0 16 0 1986.9509 Q00325 Q00325 146 161 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 2 0.034888 64.224 By MS/MS 1 0 1 1 78958 78958 0 15360 1230 16283 39098 27597 27597 1004 1 3857.8 0 VLYYTGR ISAHIDSGKTTLTERVLYYTGRIAKMHEVK GKTTLTERVLYYTGRIAKMHEVKGKDGVGA R V L G R I 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 2 1 0 0 7 0 870.45995 Q96RP9 Q96RP9 66 72 GFM1 Elongation factor G, mitochondrial yes yes 2 0.044114 105.2 By MS/MS By matching 5 0 2 1 1 7692000 7670200 21810 15361 2247 16284 39099;39100 27598 27598 1 315280 64536 VMAGALEGDLFIGPK KYCFPNYVGRPKHMRVMAGALEGDLFIGPK VMAGALEGDLFIGPKAEEHRGLLTIRYPME R V M P K A 2 0 0 1 0 0 1 3 0 1 2 1 1 1 1 0 0 0 0 1 0 0 15 0 1516.796 P42025 P42025 47 61 ACTR1B Beta-centractin yes yes 2 0.0056566 102.05 By MS/MS 7 0 1 1 211170 211170 0 15362 843 16285 39101 27599 27599 1 3773.7 0 VMASMFYEVSTR MMVQKERSLDILKGKVMASMFYEVSTRTSS KGKVMASMFYEVSTRTSSSFAAAMARLGGA K V M T R T 1 1 0 0 0 0 1 0 0 0 0 0 2 1 0 2 1 0 1 2 0 0 12 0 1419.6527 P27708 P27708 1964 1975 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 0.0012949 104.22 By MS/MS 1.5 0.5 1 1 2 278050 278050 0 15363 709 16286 39102;39103 27600 27600 486;487 1 13697 0 VMEHFIK TNGDTHLGGEDFDQRVMEHFIKLYKKKTGK GGEDFDQRVMEHFIKLYKKKTGKDVRKDNR R V M I K L 0 0 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 7 0 902.46841 P11021 P11021 262 268 HSPA5 78 kDa glucose-regulated protein yes yes 3 0.050029 88.643 By MS/MS 5 0 1 1 1770600 1770600 0 15364 545 16287 39104 27601 27601 1 72780 0 VMETNYFGPVALTK YRGTIMDTTVDVDKRVMETNYFGPVALTKA RVMETNYFGPVALTKALLPSMIKRRQGHIV R V M T K A 1 0 1 0 0 0 1 1 0 0 1 1 1 1 1 0 2 0 1 2 0 0 14 0 1568.7909 Q6IAN0 Q6IAN0 162 175 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 2.7185E-18 224.25 By MS/MS 7.67 0.471 1 2 3 4630400 4630400 0 15365 1682 16288;16289 39105;39106;39107 27602;27603 27602 1209 2 299090 0 VMGLVPAK LLGMEFSGRDASGKRVMGLVPAKGLATSVL RDASGKRVMGLVPAKGLATSVLLSPDFLWD R V M A K G 1 0 0 0 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 2 0 0 8 0 813.47825 P49327 P49327 1613 1620 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.019239 107.74 By MS/MS 1.5 0.5 1 1 2 1841200 1841200 0 15366 915 16290 39108;39109 27604 27604 1 91328 0 VMGTFSTVTSTVK AVQLCESVANKLEGKVMGTFSTVTSTVKQA GKVMGTFSTVTSTVKQALQESLVQILQPQR K V M V K Q 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 2 4 0 0 3 0 0 13 0 1356.6959 P08240 P08240 374 386 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.00058981 133.07 By MS/MS 3 2 1 1 2 1774300 1774300 0 15367 502 16291 39110;39111 27605;27606 27606 302 2 74358 0 VMGVNPYILK IIVHFMWEDVQQRGRVMGVNPYILKKNMIL QQRGRVMGVNPYILKKNMILMTNHFYAAIL R V M L K K 0 0 1 0 0 0 0 1 0 1 1 1 1 0 1 0 0 0 1 2 0 0 10 0 1132.6315 Q9NVA1 Q9NVA1 189 198 UQCC1 Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes yes 2 0.026631 81.548 By MS/MS 9 0 1 1 1454000 1454000 0 15368 2646 16292 39112 27607 27607 1565 1 834450 0 VMIPVPAGVEDGQTVR CVVCRGAGQAKQKKRVMIPVPAGVEDGQTV MIPVPAGVEDGQTVRMPVGKREIFITFRVQ R V M V R M 1 1 0 1 0 1 1 2 0 1 0 0 1 0 2 0 1 0 0 4 0 0 16 0 1666.8712 Q96EY1 Q96EY1 304 319 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 1.4448E-06 154.28 By MS/MS 7.8 0.748 2 2 1 5 22124000 22124000 0 15369 2169 16293;16294 39113;39114;39115;39116;39117 27608;27609;27610;27611 27609 1396 4 573490 0 VMLDLQSYR KRCSLPPSYCSKLVKVMLDLQSYRRSSSVF CSKLVKVMLDLQSYRRSSSVFAGKQGFITL K V M Y R R 0 1 0 1 0 1 0 0 0 0 2 0 1 0 0 1 0 0 1 1 0 0 9 0 1123.5696 Q9NU22 Q9NU22 1249 1257 MDN1 Midasin yes yes 2 0.010925 99.013 By MS/MS 1.5 0.5 1 1 2 238490 238490 0 15370 2635 16295 39118;39119 27612 27612 1563 1 11701 0 VMLESFIDTQK LRDYVIEDDVNMAIRVMLESFIDTQKFSVM MAIRVMLESFIDTQKFSVMRSMRKTFARYL R V M Q K F 0 0 0 1 0 1 1 0 0 1 1 1 1 1 0 1 1 0 0 1 0 0 11 0 1309.6588 P49736 P49736 797 807 MCM2 DNA replication licensing factor MCM2 yes yes 2 7.9569E-11 205.59 By MS/MS 3.67 0.471 1 2 3 1566700 1566700 0 15371 928 16296;16297 39120;39121;39122 27613;27614 27614 693 2 42369 0 VMLGETNPADSKPGTIR VAMVWEGLNVVKTGRVMLGETNPADSKPGT LGETNPADSKPGTIRGDFCIQVGRNIIHGS R V M I R G 1 1 1 1 0 0 1 2 0 1 1 1 1 0 2 1 2 0 0 1 0 0 17 1 1784.9091 P15531;P22392;O60361 P22392 89 105 NME1;NME2;NME2P1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase no no 2;3 0.013236 124.47 By MS/MS By matching 9.75 0.433 1 3 3 1 4926000 4867600 58432 15372 659;599 16298 39123;39124;39125;39126 27615;27616 27615 384 2 5135600 1498700 VMLLQQGLNDR LAEKVHMRAMSIAQRVMLLQQGLNDRSDAV IAQRVMLLQQGLNDRSDAVKQAMQKHLLQG R V M D R S 0 1 1 1 0 2 0 1 0 0 3 0 1 0 0 0 0 0 0 1 0 0 11 0 1285.6813 Q9BPX3 Q9BPX3 247 257 NCAPG Condensin complex subunit 3 yes yes 2 1.0794E-10 202.44 By MS/MS 4 0 2 2 1916400 1916400 0 15373 2302 16299;16300 39127;39128 27617;27618 27617 1453 1 52316 0 VMPNAIVQSVGVSSGK LSNWTMEKVRREGVKVMPNAIVQSVGVSSG MPNAIVQSVGVSSGKLLIKLKDGRKVETDH K V M G K L 1 0 1 0 0 1 0 2 0 1 0 1 1 0 1 3 0 0 0 4 0 0 16 0 1571.8341 O95831 O95831 363 378 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 1.2872E-14 195.72 By MS/MS By matching 4.8 2.09 1 1 1 3 2 1 1 9 1 21866000 21841000 24785 15374 409 16301;16302 39129;39130;39131;39132;39133;39134;39135;39136;39137;39138 27619;27620;27621;27622 27620 218 4 792120 73340 VMQEEIFGPILPIVPVK YIAPTVLTDVDPKTKVMQEEIFGPILPIVP QEEIFGPILPIVPVKNVDEAINFINEREKP K V M V K N 0 0 0 0 0 1 2 1 0 3 1 1 1 1 3 0 0 0 0 3 0 0 17 0 1908.0794 P51648 P51648 327 343 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 2;3 6.5358E-20 214 By MS/MS 6.6 0.8 3 1 1 5 7214900 7214900 0 15375 972 16303;16304 39139;39140;39141;39142;39143 27623;27624;27625;27626;27627;27628 27626 732 6 59748 0 VMQEQGTHPK ECWFPKATDKSFVEKVMQEQGTHPKFQKPK SFVEKVMQEQGTHPKFQKPKQLKDKADFCI K V M P K F 0 0 0 0 0 2 1 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 10 0 1153.555 P35579 P35579 546 555 MYH9 Myosin-9 yes yes 2 0.0050057 153.97 By MS/MS 2 0 1 1 0 0 0 15376 793 16305 39144 27629 27629 1 0 0 VMQVLNADAIVVK PTANLDQKDKQFVAKVMQVLNADAIVVKLN AKVMQVLNADAIVVKLNSGDYKTIHLSSIR K V M V K L 2 0 1 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 4 0 0 13 0 1398.7905 Q7KZF4 Q7KZF4 347 359 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 1.0621E-11 196.11 By MS/MS By MS/MS 4 0 2 1 1 1441800 1408000 33774 15377 1757 16306 39145;39146 27630;27631 27631 1240 2 38438 70574 VMSDFAINQEQK ASAFSLPICEGLTQRVMSDFAINQEQKEAL TQRVMSDFAINQEQKEALSNLTALTSDSDT R V M Q K E 1 0 1 1 0 2 1 0 0 1 0 1 1 1 0 1 0 0 0 1 0 0 12 0 1408.6657 Q96EY7 Q96EY7 649 660 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 4.7697E-11 204.56 By MS/MS By MS/MS 5 0 2 1 1 1727000 1697100 29848 15378 2170 16307 39147;39148 27632;27633 27633 2 69759 88320 VMSQEIQEQLHK LKKMVKDQQEAEKKKVMSQEIQEQLHKQQE KKKVMSQEIQEQLHKQQEVIADKQMSVKED K V M H K Q 0 0 0 0 0 3 2 0 1 1 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1468.7344 Q14204 Q14204 3255 3266 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.001094 132.25 By MS/MS 1 0 2 2 766530 766530 0 15379 1421 16308;16309 39149;39150 27634;27635 27635 1122 2 37451 0 VMTVNYNTHGELGEGAR QYLSQGNVVFKDSVKVMTVNYNTHGELGEG TVNYNTHGELGEGARKFVFFNIPQIQYKNP K V M A R K 1 1 2 0 0 0 2 3 1 0 1 0 1 0 0 0 2 0 1 2 0 0 17 0 1846.8632 P82663 P82663 29 45 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 2;3 0.0035516 113.99 By MS/MS 9 0 4 4 5012400 5012400 0 15380 1202 16310;16311 39151;39152;39153;39154 27636;27637;27638;27639 27637 989 4 2876700 0 VMVQPINLIFR ______________________________ KVQKVMVQPINLIFRYLQNRSRIQVWLYEQ K V M F R Y 0 1 1 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 0 2 0 0 11 0 1328.7639 P62304 P62304 13 23 SNRPE Small nuclear ribonucleoprotein E yes yes 2 0.0016666 118.5 By MS/MS 10 0 1 1 365450 365450 0 15381 1128 16312 39155 27640 27640 883 1 388440 0 VMVTDADR IKRPFLEPKKHVGGRVMVTDADRSILSPGG KKHVGGRVMVTDADRSILSPGGSCGPIKVK R V M D R S 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 2 0 0 8 0 905.42767 P78347 P78347 199 206 GTF2I General transcription factor II-I yes yes 2 0.014913 104.44 By MS/MS 3 0 1 1 544470 544470 0 15382 1194 16313 39156 27641 27641 941 1 14213 0 VMVTNVTSLLK VGDDPAVWQLKNSAKVMVTNVTSLLKTVKA NSAKVMVTNVTSLLKTVKAVEDEATKGTRA K V M L K T 0 0 1 0 0 0 0 0 0 0 2 1 1 0 0 1 2 0 0 3 0 0 11 0 1203.6897 Q9Y490;Q9Y4G6 Q9Y490 2120 2130 TLN1;TLN2 Talin-1;Talin-2 yes no 2 0.033324 77.062 By MS/MS 2.5 1.12 1 1 1 1 4 1265100 1265100 0 15383 2947 16314 39157;39158;39159;39160 27642 27642 1700 1 51159 0 VNADIEKVNQNQAK RDQVARTHLTEDTPKVNADIEKVNQNQAKR KVNADIEKVNQNQAKRCTVIGGSGFLGQHM K V N A K R 2 0 3 1 0 2 1 0 0 1 0 2 0 0 0 0 0 0 0 2 0 0 14 1 1569.8111 Q15738 Q15738 25 38 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 2;3 0.00055668 171.32 By MS/MS 7.33 0.471 2 1 3 2902200 2902200 0 15384 1515 16315 39161;39162;39163 27643;27644 27644 2 57101 0 VNAELQAR KTGGLEIDSDFGGFRVNAELQARSNIWVAG SDFGGFRVNAELQARSNIWVAGDAACFYDI R V N A R S 2 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 899.48248 O95831 O95831 423 430 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.0019651 157.68 By MS/MS 5.5 1.12 1 1 1 1 4 12493000 12493000 0 15385 409 16316 39164;39165;39166;39167 27645;27646 27646 2 440010 0 VNAGTLAVLQR AALEGKLVLLDGIHRVNAGTLAVLQRLIHD GIHRVNAGTLAVLQRLIHDRELSLYDGSRL R V N Q R L 2 1 1 0 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 2 0 0 11 0 1140.6615 A3KMH1 A3KMH1 519 529 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 3.8361E-22 242.35 By MS/MS 2.5 0.5 1 1 2 1662600 1662600 0 15386 13 16317 39168;39169 27647;27648 27647 2 70603 0 VNDTIQIDLETGK THDARTIRYPDPLIKVNDTIQIDLETGKIT IKVNDTIQIDLETGKITDFIKFDTGNLCMV K V N G K I 0 0 1 2 0 1 1 1 0 2 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1444.7409 P62701 P62701 156 168 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 2.7787E-12 249.69 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 3505500 3408700 96727 15387 1140 16318 39170;39171;39172 27649;27650 27650 2 333280 825200 VNDVNEFAPVFVER GANTKKSHKATVHVRVNDVNEFAPVFVERL RVNDVNEFAPVFVERLYRAAVTEGKLYDRI R V N E R L 1 1 2 1 0 0 2 0 0 0 0 0 0 2 1 0 0 0 0 4 0 0 14 0 1633.81 Q9BQT9 Q9BQT9 135 148 CLSTN3 Calsyntenin-3 yes yes 2 0.0037732 109.22 By MS/MS 3.5 0.5 1 1 2 309390 309390 0 15388 2320 16319 39173;39174 27651 27651 1 8353 0 VNEAREELMR TQGLIFVVDSNDRERVNEAREELMRMLAED NDRERVNEAREELMRMLAEDELRDAVLLVF R V N M R M 1 2 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 10 1 1245.6136 P84077;P61204 P84077 100 109 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2;3 0.023435 103.88 By MS/MS 9.5 0.5 3 3 6 4493100 4493100 0 15389 1093 16320;16321 39175;39176;39177;39178;39179;39180 27652;27653;27654;27655 27655 860 4 3156700 0 VNEATAVLYAR LNCKSKRAVRDYLFRVNEATAVLYARHVLA YLFRVNEATAVLYARHVLASLLAEWPSHVP R V N A R H 3 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 11 0 1205.6404 O43149 O43149 2610 2620 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 2 0.00032259 149.96 By MS/MS 1 0 1 1 255370 255370 0 15390 182 16322 39181 27656 27656 1 12477 0 VNEDTMELLR NSRILPHVYPIRLVKVNEDTMELLRDAQGL IRLVKVNEDTMELLRDAQGLCIPCQAGEPG K V N L R D 0 1 1 1 0 0 2 0 0 0 2 0 1 0 0 0 1 0 0 1 0 0 10 0 1218.5914 Q6PCB7 Q6PCB7 424 433 SLC27A1 Long-chain fatty acid transport protein 1 yes yes 2 0.0027633 132.32 By MS/MS 1.5 0.5 1 1 2 544710 544710 0 15391 1713 16323 39182;39183 27657 27657 1 26695 0 VNEISVEVDSDPR TRAKKKMVVMHPMPRVNEISVEVDSDPRAA PRVNEISVEVDSDPRAAYFRQAENGMYIRM R V N P R A 0 1 1 2 0 0 2 0 0 1 0 0 0 0 1 2 0 0 0 3 0 0 13 0 1457.6998 P27708 P27708 2188 2200 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 2 8.5445E-46 273.24 By MS/MS 2 0.816 1 1 1 3 3425700 3425700 0 15392 709 16324 39184;39185;39186 27658;27659;27660 27658 3 158750 0 VNEIVETNRPDSK SRFIAAGRLHCKIDKVNEIVETNRPDSKNW DKVNEIVETNRPDSKNWQYQETIKKGDLLL K V N S K N 0 1 2 1 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 2 0 0 13 1 1499.758 Q15008 Q15008 350 362 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 2;3 2.1502E-07 211.63 By MS/MS 6.67 0.471 1 2 3 5583600 5583600 0 15393 1460 16325 39187;39188;39189 27661;27662 27662 2 92330 0 VNEMIVTGQYGR DPVEETRHHAEVVKKVNEMIVTGQYGRLFA VKKVNEMIVTGQYGRLFAVVHFASRQWKVT K V N G R L 0 1 1 0 0 1 1 2 0 1 0 0 1 0 0 0 1 0 1 2 0 0 12 0 1365.6711 Q7Z2W9 Q7Z2W9 83 94 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 9.5804E-05 155.47 By MS/MS 9 0 1 1 499460 499460 0 15394 1778 16326 39190 27663 27663 1258 1 286650 0 VNFAMNVGK KDPVQEAWAEDVDLRVNFAMNVGKARGFFK EDVDLRVNFAMNVGKARGFFKKGDVVIVLT R V N G K A 1 0 2 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 2 0 0 9 0 978.49569 P14618 P14618 490 498 PKM Pyruvate kinase PKM yes yes 2 0.021239 113.41 By MS/MS 6 0 1 1 1707400 1707400 0 15395 588 16327 39191 27664 27664 1 13315 0 VNFGTDFLTAIK KCRHPTGGSFIRPNKVNFGTDFLTAIKNRY PNKVNFGTDFLTAIKNRYVLEDGPEEDRKE K V N I K N 1 0 1 1 0 0 0 1 0 1 1 1 0 2 0 0 2 0 0 1 0 0 12 0 1324.7027 Q15813 Q15813 75 86 TBCE Tubulin-specific chaperone E yes yes 2 8.6833E-05 157.97 By MS/MS 6 0 1 1 1345400 1345400 0 15396 1524 16328 39192 27665 27665 1 10491 0 VNFLVNAAGINR DVQNTFEELEKHLGRVNFLVNAAGINRDGL LGRVNFLVNAAGINRDGLLVRTKTEDMVSQ R V N N R D 2 1 3 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 12 0 1286.7095 Q8N4T8 Q8N4T8 77 88 CBR4 Carbonyl reductase family member 4 yes yes 2 5.4215E-07 179.51 By MS/MS 9 0 1 1 227770 227770 0 15397 1916 16329 39193 27666 27666 1 130720 0 VNFPENGFLSPDK YRRPYEKGRLIIEFKVNFPENGFLSPDKLS FKVNFPENGFLSPDKLSLLEKLLPERKEVE K V N D K L 0 0 2 1 0 0 1 1 0 0 1 1 0 2 2 1 0 0 0 1 0 0 13 0 1462.7092 P31689 P31689 326 338 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.0010554 130.69 By MS/MS 6.5 0.5 1 1 2 1961300 1961300 0 15398 755 16330 39194;39195 27667 27667 1 22430 0 VNFSEEGETEEDDQDSSHSSVTTVK PLRYPRYEATSVQQKVNFSEEGETEEDDQD EDDQDSSHSSVTTVKARSRDSDESGDKTTR K V N V K A 0 0 1 3 0 1 5 1 1 0 0 1 0 1 0 5 3 0 0 3 0 0 25 0 2755.158 Q5JTV8 Q5JTV8 212 236 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 3 6.9097E-06 99.078 By MS/MS 6 0 1 1 6412600 6412600 0 15399 1610 16331 39196 27668 27668 1 50005 0 VNFTVDQIR ______________________________ ______________________________ M V N I R A 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 9 0 1090.5771 P13639 P13639 2 10 EEF2 Elongation factor 2 yes yes 2 7.0634E-08 196.79 By MS/MS By matching 5.44 2.71 1 1 2 1 1 1 1 1 8 1 40427000 40258000 168250 15400 576 16332 39197;39198;39199;39200;39201;39202;39203;39204;39205 27669;27670;27671;27672;27673;27674;27675;27676 27673 8 2442800 351580 VNGRPLEMIEPR ATAVAHCKRGNGLIKVNGRPLEMIEPRTLQ LIKVNGRPLEMIEPRTLQYKLLEPVLLLGK K V N P R T 0 2 1 0 0 0 2 1 0 1 1 0 1 0 2 0 0 0 0 1 0 0 12 1 1409.7449 P62249 P62249 34 45 RPS16 40S ribosomal protein S16 yes yes 3 0.0091357 85.845 By MS/MS 10 0 1 1 158360 158360 0 15401 1120 16333 39206 27677 27677 1 168320 0 VNGVDDAANFR RDFSRYNYLSLDSAKVNGVDDAANFRTVRN DSAKVNGVDDAANFRTVRNAMQIVGFMDHE K V N F R T 2 1 2 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 11 0 1176.5523 O43795 O43795 242 252 MYO1B Unconventional myosin-Ib yes yes 2 6.8047E-05 166.66 By MS/MS 4.5 0.5 1 1 2 1566200 1566200 0 15402 223 16334 39207;39208 27678 27678 1 44108 0 VNIDDLVK LTSLAAALDENKDGKVNIDDLVKVIELVDK DENKDGKVNIDDLVKVIELVDKEDVHISTS K V N V K V 0 0 1 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 914.5073 O95202 O95202 683 690 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 2 0.0025598 166.52 By MS/MS 5.5 0.5 1 1 2 1843100 1843100 0 15403 374 16335 39209;39210 27679 27679 1 56240 0 VNIFGVESGKK SPDSQYLATGTHVGKVNIFGVESGKKEYSL HVGKVNIFGVESGKKEYSLDTRGKFILSIA K V N K K E 0 0 1 0 0 0 1 2 0 1 0 2 0 1 0 1 0 0 0 2 0 0 11 1 1176.6503 Q9GZS3 Q9GZS3 130 140 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 2 0.027903 100.88 By MS/MS 8 0 1 1 1665800 1665800 0 15404 2442 16336 39211 27680 27680 1 109900 0 VNIGMIDQSR RVLGLLGALDPYKHKVNIGMIDQSRDASAV PYKHKVNIGMIDQSRDASAVSLSESKSSQD K V N S R D 0 1 1 1 0 1 0 1 0 2 0 0 1 0 0 1 0 0 0 1 0 0 10 0 1131.5706 P42345 P42345 901 910 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.019494 102.95 By MS/MS 2 0 1 1 0 0 0 15405 849 16337 39212 27681 27681 601 1 0 0 VNIIPLIAK LKPLDIEFMKRLHEKVNIIPLIAKADTLTP KRLHEKVNIIPLIAKADTLTPEECQQFKKQ K V N A K A 1 0 1 0 0 0 0 0 0 3 1 1 0 0 1 0 0 0 0 1 0 0 9 0 979.643 Q16181;Q6ZU15 Q16181 187 195 SEPT7;SEPT14 Septin-7;Septin-14 yes no 2 0.0074791 110.31 By MS/MS 6.5 0.5 2 2 4 4405500 4405500 0 15406 1530 16338 39213;39214;39215;39216 27682;27683;27684 27683 3 44077 0 VNIKPQVDR VEIDVKWLNENAVEKVNIKPQVDRYRLKNG ENAVEKVNIKPQVDRYRLKNGRRIILLAEG K V N D R Y 0 1 1 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 9 1 1067.6087 P23526 P23526 319 327 AHCY Adenosylhomocysteinase yes yes 2;3 0.015042 129.42 By MS/MS 7.75 0.829 2 1 1 4 2097800 2097800 0 15407 670 16339 39217;39218;39219;39220 27685;27686 27685 2 75679 0 VNILFDFVK VLTLSDDLERTIEERVNILFDFVKKKKEEG RTIEERVNILFDFVKKKKEEGVIDSSDKEI R V N V K K 0 0 1 1 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 2 0 0 9 0 1093.6172 P55010 P55010 240 248 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.00036669 156.35 By MS/MS 6 0 1 1 1341300 1341300 0 15408 1021 16340 39221 27687 27687 1 10460 0 VNIVPVIAK LKPLDVAFMKAIHNKVNIVPVIAKADTLTL KAIHNKVNIVPVIAKADTLTLKERERLKKR K V N A K A 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 3 0 0 9 0 951.6117 Q15019 Q15019 175 183 SEPT2 Septin-2 yes yes 2 0.043937 83.206 By MS/MS 7 0 1 1 4968200 4968200 0 15409 1462 16341 39222 27688 27688 1 88783 0 VNKDDIQK EEAIVELVENGKKVKVNKDDIQKMNPPKFS ENGKKVKVNKDDIQKMNPPKFSKVEDMAEL K V N Q K M 0 0 1 2 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 8 1 958.50836 P35579 P35579 67 74 MYH9 Myosin-9 yes yes 2;3 0.0099622 167.23 By MS/MS 2 0 2 2 423080 423080 0 15410 793 16342 39223;39224 27689;27690 27689 2 21029 0 VNLAELFK AIPAVEVFEGEPGNKVNLAELFKGKKGVLF EGEPGNKVNLAELFKGKKGVLFGVPGAFTP K V N F K G 1 0 1 0 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 8 0 932.53312 P30044 P30044 76 83 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 2 0.024239 112.41 By MS/MS 10 0 1 1 330460 330460 0 15411 730 16343 39225 27691 27691 1 351250 0 VNLEESSGVENSPAGAR YQALVHDVLDFHLNRVNLEESSGVENSPAG LEESSGVENSPAGARPKRKNKKSYDLTPVD R V N A R P 2 1 2 0 0 0 3 2 0 0 1 0 0 0 1 3 0 0 0 2 0 0 17 0 1714.8122 Q8WVM8 Q8WVM8 292 308 SCFD1 Sec1 family domain-containing protein 1 yes yes 2 5.7889E-25 220.99 By MS/MS 5 0 1 1 1482800 1482800 0 15412 2033 16344 39226 27692 27692 1 60948 0 VNLEESSGVENSPAGARPK YQALVHDVLDFHLNRVNLEESSGVENSPAG ESSGVENSPAGARPKRKNKKSYDLTPVDKF R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 3 0.0012531 97.129 By MS/MS 5 0 1 1 2415300 2415300 0 15413 2033 16345 39227 27693 27693 1 99277 0 VNLFTDFDK KNADGYKLDKQHTFRVNLFTDFDKYMTISD KQHTFRVNLFTDFDKYMTISDEWDIPEKQP R V N D K Y 0 0 1 2 0 0 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 9 0 1097.5393 P55884 P55884 263 271 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 4.1785E-05 174.41 By MS/MS 4 0.816 1 1 1 3 2341500 2341500 0 15414 1040 16346 39228;39229;39230 27694;27695 27694 2 68514 0 VNLGAFR VAVVIDPTRTISAGKVNLGAFRTYPKGYKP TRTISAGKVNLGAFRTYPKGYKPPDEGPSE K V N F R T 1 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 775.43407 Q92905 Q92905 181 187 COPS5 COP9 signalosome complex subunit 5 yes yes 2 0.021238 122.98 By MS/MS 7.5 0.5 1 1 2 1827000 1827000 0 15415 2089 16347 39231;39232 27696;27697 27697 2 71869 0 VNLNQIPLGR IQSTGIWGIGVATQKVNLNQIPLGRDMHSL VATQKVNLNQIPLGRDMHSLVMRNDGALYH K V N G R D 0 1 2 0 0 1 0 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 10 0 1122.6509 Q5W111 Q5W111 86 95 SPRYD7 SPRY domain-containing protein 7 yes yes 2 0.00090076 127.46 By MS/MS 9 0 1 1 350660 350660 0 15416 1663 16348 39233 27698 27698 1 201240 0 VNLVSGHVK TCTIWGLETGQVLGRVNLVSGHVKTQLIAH GQVLGRVNLVSGHVKTQLIAHDKEVYDIAF R V N V K T 0 0 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 3 0 0 9 0 951.55016 P61962 P61962 159 167 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 2 0.021697 88.37 By MS/MS 7.5 0.5 1 1 2 1619700 1619700 0 15417 1108 16349 39234;39235 27699 27699 1 53071 0 VNMPAKPAPPTK PTSKDQVLAMLEKAKVNMPAKPAPPTKATS KAKVNMPAKPAPPTKATSKPMGGSAPAKFQ K V N T K A 2 0 1 0 0 0 0 0 0 0 0 2 1 0 4 0 1 0 0 1 0 0 12 1 1249.6853 Q14008 Q14008 1078 1089 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.00295 93.839 By MS/MS 2 0 1 1 0 0 0 15418 1405 16350 39236 27700 27700 1078 1 0 0 VNMPPAVDPAEFFVLMER RKTRHDPLAKSKIERVNMPPAVDPAEFFVL PPAVDPAEFFVLMERYQHYRQTVRALRMEF R V N E R Y 2 1 1 1 0 0 2 0 0 0 1 0 2 2 3 0 0 0 0 3 0 0 18 0 2061.0064 Q9BYN8 Q9BYN8 42 59 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 2 0.0039208 77.754 By MS/MS 9 0 1 1 560900 560900 0 15419 2417 16351 39237 27701;27702 27701 1491;1492 2 321900 0 VNNADDFPNLFR MIKASEGGGGKGIRKVNNADDFPNLFRQVQ IRKVNNADDFPNLFRQVQAEVPGSPIFVMR K V N F R Q 1 1 3 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 12 0 1420.6735 Q13085 Q13085 324 335 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 2 0.040487 77.379 By MS/MS 1 0 1 1 68876 68876 0 15420 1332 16352 39238 27703 27703 1 3365.1 0 VNNSTMLGASGDYADFQYLK YGSLARFRNISRIMRVNNSTMLGASGDYAD MLGASGDYADFQYLKQVLGQMVIDEELLGD R V N L K Q 2 0 2 2 0 1 0 2 0 0 2 1 1 1 0 2 1 0 2 1 0 0 20 0 2193.0048 P28070 P28070 90 109 PSMB4 Proteasome subunit beta type-4 yes yes 2 1.028E-20 195.5 By MS/MS 9 0 1 1 991080 991080 0 15421 713 16353 39239 27704 27704 491 1 568790 0 VNPALAELNLR GLTEARCKDISSALRVNPALAELNLRSNEL SALRVNPALAELNLRSNELGDVGVHCVLQG R V N L R S 2 1 2 0 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 11 0 1208.6877 P13489 P13489 54 64 RNH1 Ribonuclease inhibitor yes yes 2 9.6484E-05 162.36 By MS/MS 8.5 1.12 1 1 1 1 4 29537000 29537000 0 15422 574 16354 39240;39241;39242;39243 27705;27706;27707 27706 3 906620 0 VNPFRPGDSEPPPAPGAQR APQKKFGPVVAPKPKVNPFRPGDSEPPPAP RPGDSEPPPAPGAQRAQMGRVGEIPPPPPE K V N Q R A 2 2 1 1 0 1 1 2 0 0 0 0 0 1 6 1 0 0 0 1 0 0 19 1 1987.9864 Q15942 Q15942 36 54 ZYX Zyxin yes yes 3 0.015898 62.525 By MS/MS 5 0 1 1 1834900 1834900 0 15423 1528 16355 39244 27708 27708 1 75423 0 VNPIQGLASK KEWVAKQTKRMLDMKVNPIQGLASKWDYEK MLDMKVNPIQGLASKWDYEKNEWKK_____ K V N S K W 1 0 1 0 0 1 0 1 0 1 1 1 0 0 1 1 0 0 0 1 0 0 10 0 1025.5869 P13073 P13073 150 159 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 2 0.0053835 106.2 By MS/MS 10 0 1 1 4034700 4034700 0 15424 571 16356 39245 27709 27709 1 4288500 0 VNPNTALTLLEK TYLADYGQPASKYLRVNPNTALTLLEKMKD YLRVNPNTALTLLEKMKDTSKKNNIFAQFR R V N E K M 1 0 2 0 0 0 1 0 0 0 3 1 0 0 1 0 2 0 0 1 0 0 12 0 1311.7398 Q8TAG9 Q8TAG9 750 761 EXOC6 Exocyst complex component 6 yes yes 2 0.016873 89.356 By MS/MS 4 0 1 1 1187600 1187600 0 15425 1982 16357 39246 27710 27710 1 32419 0 VNPVTALTLLEK TYLADYGQPNCKYLRVNPVTALTLLEKMKD YLRVNPVTALTLLEKMKDTSRKNNMFAQFR R V N E K M 1 0 1 0 0 0 1 0 0 0 3 1 0 0 1 0 2 0 0 2 0 0 12 0 1296.7653 Q9Y2D4 Q9Y2D4 759 770 EXOC6B Exocyst complex component 6B yes yes 2 2.4883E-05 171.49 By MS/MS 4 0 1 1 452080 452080 0 15426 2884 16358 39247 27711;27712 27711 2 12341 0 VNQAIWLLCTGAR GTVRRQAVDVSPLRRVNQAIWLLCTGAREA RRVNQAIWLLCTGAREAAFRNIKTIAECLA R V N A R E 2 1 1 0 1 1 0 1 0 1 2 0 0 0 0 0 1 1 0 1 0 0 13 0 1500.7871 P46782 P46782 147 159 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 8.6627E-06 199.43 By MS/MS 9 0 1 1 686020 686020 0 15427 888 16359 39248 27713 27713 1 393710 0 VNQIGSVTESLQACK AKAVNEKSCNCLLLKVNQIGSVTESLQACK VNQIGSVTESLQACKLAQANGWGVMVSHRS K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 1.025E-49 324.11 By MS/MS By MS/MS 6.33 0.471 2 1 2 1 25089000 25089000 0 15428 482 16360 39249;39250;39251 27714;27715 27715 2 201340 0 VNSVYVLVR LGKVLLEKLLRSCPKVNSVYVLVRQKAGQT LRSCPKVNSVYVLVRQKAGQTPQERVEEVL K V N V R Q 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 4 0 0 9 0 1047.6077 Q8WVX9 Q8WVX9 37 45 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 1.2361E-23 265.95 By MS/MS 6 0 1 1 2042700 2042700 0 15429 2036 16361 39252 27716 27716 1 15929 0 VNTLIRPDGEK IKQAVKKLYDIDVAKVNTLIRPDGEKKAYV DVAKVNTLIRPDGEKKAYVRLAPDYDALDV K V N E K K 0 1 1 1 0 0 1 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 11 1 1240.6776 P62750 P62750 124 134 RPL23A 60S ribosomal protein L23a yes yes 2 0.010058 128.81 By MS/MS By matching 9 0 2 1 1 316280 266050 50226 15430 1142 16362 39253;39254 27717 27717 1 152690 541300 VNTQSSSNSTLPER DSQEKDATCELPLQKVNTQSSSNSTLPERL KVNTQSSSNSTLPERLKASENSESEYSRSE K V N E R L 0 1 2 0 0 1 1 0 0 0 1 0 0 0 1 4 2 0 0 1 0 0 14 0 1518.7274 Q8IXW5 Q8IXW5 295 308 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 2.0422E-18 228.61 By MS/MS 5 0 1 1 980990 980990 0 15431 1875 16363 39255 27718 27718 1 40323 0 VNVDIINFGEEEVNTEK EKDLVKLAKRLKKEKVNVDIINFGEEEVNT VDIINFGEEEVNTEKLTAFVNTLNGKDGTG K V N E K L 0 0 3 1 0 0 4 1 0 2 0 1 0 1 0 0 1 0 0 3 0 0 17 0 1947.9426 P55036;A2A3N6 P55036 136 152 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 2 1.5278E-13 178.22 By MS/MS 7.5 1.5 1 1 2 5063800 5063800 0 15432 1023 16364 39256;39257 27719;27720 27719 2 109120 0 VNVDKVLER QQTQNQVDEVVDIMRVNVDKVLERDQKLSE VVDIMRVNVDKVLERDQKLSELDDRADALQ R V N E R D 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 0 0 9 1 1070.6084 Q15836;P63027;P23763 Q15836 31 39 VAMP3;VAMP2;VAMP1 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2;Vesicle-associated membrane protein 1 yes no 3 0.019444 96.342 By MS/MS 10 0 1 1 250620 250620 0 15433 1526 16365 39258 27721 27721 1 266380 0 VNVGAGSHPNK MVSWGGVSIPNSPFRVNVGAGSHPNKVKVY SPFRVNVGAGSHPNKVKVYGPGVAKTGLKA R V N N K V 1 0 2 0 0 0 0 2 1 0 0 1 0 0 1 1 0 0 0 2 0 0 11 0 1078.552 P21333 P21333 761 771 FLNA Filamin-A yes yes 2 0.00013108 157.75 By MS/MS 2 0 1 1 2038800 2038800 0 15434 648 16366 39259 27722 27722 1 101340 0 VNVPVIGGHAGK ANTFVAELKGLDPARVNVPVIGGHAGKTII PARVNVPVIGGHAGKTIIPLISQCTPKVDF R V N G K T 1 0 1 0 0 0 0 3 1 1 0 1 0 0 1 0 0 0 0 3 0 0 12 0 1146.6509 P40926 P40926 192 203 MDH2 Malate dehydrogenase, mitochondrial yes yes 3 0.01207 83.397 By MS/MS 8 0 1 1 1825800 1825800 0 15435 832 16367 39260 27723 27723 1 120450 0 VNVTGIYR FAHNDLVDKVQPGDRVNVTGIYRAVPIRVN KVQPGDRVNVTGIYRAVPIRVNPRVSNVKS R V N Y R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 2 0 0 8 0 920.50797 P33991 P33991 388 395 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.016592 111.17 By MS/MS 4.5 0.5 1 1 2 3246500 3246500 0 15436 773 16368 39261;39262 27724 27724 1 95177 0 VNWATTPSSQK LAAMNGRKILGKEVKVNWATTPSSQKKDTS KEVKVNWATTPSSQKKDTSNHFHVFVGDLS K V N Q K K 1 0 1 0 0 1 0 0 0 0 0 1 0 0 1 2 2 1 0 1 0 0 11 0 1217.6041 P31483;Q01085 Q01085 80 90 TIA1;TIAL1 Nucleolysin TIA-1 isoform p40;Nucleolysin TIAR no no 2 0.0028547 140.17 By MS/MS 7 0 1 1 1658100 1658100 0 15437 754;1239 16369 39263 27725 27725 1 29630 0 VPAFETLK HDFFQDKVWPHLALRVPAFETLKVQSAWAG WPHLALRVPAFETLKVQSAWAGYYDYNTFD R V P L K V 1 0 0 0 0 0 1 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 8 0 903.50657 Q96CU9 Q96CU9 395 402 FOXRED1 FAD-dependent oxidoreductase domain-containing protein 1 yes yes 2 0.047128 92.47 By MS/MS 6 0 1 1 4563200 4563200 0 15438 2142 16370 39264 27726 27726 1 35584 0 VPAGNWVLIEGVDQPIVK RLWISVARYHIEVNRVPAGNWVLIEGVDQP GNWVLIEGVDQPIVKTATITEPRGNEEAQI R V P V K T 1 0 1 1 0 1 1 2 0 2 1 1 0 0 2 0 0 1 0 4 0 0 18 0 1933.0673 Q15029 Q15029 544 561 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 1.5416E-18 197.06 By MS/MS 4 0 1 1 423210 423210 0 15439 1466 16371 39265 27727 27727 1 11553 0 VPAINVNDSVTK GVHNLYKMMANGILKVPAINVNDSVTKSKF ILKVPAINVNDSVTKSKFDNLYGCRESLID K V P T K S 1 0 2 1 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 3 0 0 12 0 1255.6772 P23526 P23526 175 186 AHCY Adenosylhomocysteinase yes yes 2 0.0024049 119.03 By MS/MS 7.5 0.5 1 1 2 12284000 12284000 0 15440 670 16372 39266;39267 27728;27729 27728 2 252080 0 VPALLENQVEER QTVTGLKKDLSGVQKVPALLENQVEERTCS VQKVPALLENQVEERTCSDSEDIGSSECSD K V P E R T 1 1 1 0 0 1 3 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 12 0 1395.7358 Q9BRS2 Q9BRS2 482 493 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 2 0.0044327 119.74 By MS/MS By matching 5.33 0.471 2 1 2 1 2258700 2218400 40312 15441 2328 16373 39268;39269;39270 27730 27730 1 57402 119280 VPANPASVSTVPSK KVPTTLMPVNTVALKVPANPASVSTVPSKL KVPANPASVSTVPSKLPTSSKPPGAVPSNA K V P S K L 2 0 1 0 0 0 0 0 0 0 0 1 0 0 3 3 1 0 0 3 0 0 14 0 1352.73 Q7Z434 Q7Z434 312 325 MAVS Mitochondrial antiviral-signaling protein yes yes 2 0.0047304 108.72 By MS/MS 5.5 0.5 1 1 2 1322100 1322100 0 15442 1789 16374 39271;39272 27731 27731 1 30985 0 VPAPFKPITR INRSMDPKNMFAIWRVPAPFKPITRKSVGH FAIWRVPAPFKPITRKSVGHRMGGGKGAID R V P T R K 1 1 0 0 0 0 0 0 0 1 0 1 0 1 3 0 1 0 0 1 0 0 10 1 1124.6706 Q9NX20 Q9NX20 124 133 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 3 0.031986 87.806 By MS/MS 8 0 1 1 1376900 1376900 0 15443 2676 16375 39273 27732 27732 1 90834 0 VPATNLILGEGR NFHGGHFEIHFNQVRVPATNLILGEGRGFE QVRVPATNLILGEGRGFEISQGRLGPGRIH R V P G R G 1 1 1 0 0 0 1 2 0 1 2 0 0 0 1 0 1 0 0 1 0 0 12 0 1238.6983 Q709F0 Q709F0 608 619 ACAD11 Acyl-CoA dehydrogenase family member 11 yes yes 2 3.2523E-05 169.82 By MS/MS By matching 5.38 2.6 1 1 2 1 1 1 1 7 1 14615000 14598000 16444 15444 1750 16376 39274;39275;39276;39277;39278;39279;39280;39281 27733;27734;27735;27736 27733 4 614090 48657 VPDHHPC ILRVDNIIKAAPRKRVPDHHPC________ IKAAPRKRVPDHHPC_______________ R V P P C - 0 0 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 1 0 0 7 0 860.35992 P78371 P78371 529 535 CCT2 T-complex protein 1 subunit beta yes yes 2 0.019412 128 By MS/MS 7 0.816 1 1 1 3 11259000 11259000 0 15445 1195 16377 39282;39283;39284 27737 27737 1 91083 0 VPDITECK HAKNRYYYYHRQYRRVPDITECKEEDIMCM YHRQYRRVPDITECKEEDIMCMYEAEMQWK R V P C K E 0 0 0 1 1 0 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 8 0 960.45863 O96000 O96000 65 72 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 0.038799 95.741 By MS/MS 9 0 1 1 143060 143060 0 15446 417 16378 39285 27738 27738 1 82103 0 VPDSTYEMIGGLDK PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQ KVPDSTYEMIGGLDKQIKEIKEVIELPVKH K V P D K Q 0 0 0 2 0 0 1 2 0 1 1 1 1 0 1 1 1 0 1 1 0 0 14 0 1523.7178 P62195 P62195 143 156 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.00071718 122.55 By MS/MS 7 0 1 1 1141200 1141200 0 15447 1117 16379 39286 27739 27739 872 1 20394 0 VPDVLVADPPIAR RFRIDELEPRRPRYRVPDVLVADPPIARLS YRVPDVLVADPPIARLSVSGRDENSVELTM R V P A R L 2 1 0 2 0 0 0 0 0 1 1 0 0 0 3 0 0 0 0 3 0 0 13 0 1360.7715 Q14697 Q14697 115 127 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0029062 114.83 By MS/MS 4 0 1 1 481110 481110 0 15448 1443 16380 39287 27740 27740 1 13134 0 VPEEDLK ATQYFADRDMFCAGRVPEEDLKRTMMACGG RDMFCAGRVPEEDLKRTMMACGGSIQTSVN R V P L K R 0 0 0 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 7 0 828.4229 Q99832 Q99832 314 320 CCT7 T-complex protein 1 subunit eta yes yes 2 0.019236 128.48 By MS/MS By matching 6 0 2 1 1 26835000 26811000 23746 15449 2295 16381 39288;39289 27741 27741 1 209070 72827 VPEEDLKR ATQYFADRDMFCAGRVPEEDLKRTMMACGG DMFCAGRVPEEDLKRTMMACGGSIQTSVNA R V P K R T 0 1 0 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 8 1 984.52401 Q99832 Q99832 314 321 CCT7 T-complex protein 1 subunit eta yes yes 2 0.025621 131.06 By MS/MS By matching 6 0 2 1 1 67427000 67404000 22886 15450 2295 16382 39290;39291 27742 27742 1 525620 70190 VPEIEVTVEGPNNNNPQTSAVR LQSPKRPRSPGSNSKVPEIEVTVEGPNNNN VEGPNNNNPQTSAVRTPTQTNGSNVPFKPR K V P V R T 1 1 4 0 0 1 3 1 0 1 0 0 0 0 3 1 2 0 0 4 0 0 22 0 2363.1717 P78347 P78347 681 702 GTF2I General transcription factor II-I yes yes 2;3 8.1322E-20 181.58 By MS/MS 3.33 0.471 2 1 3 1776500 1776500 0 15451 1194 16383 39292;39293;39294 27743;27744 27743 2 46567 0 VPELFANR DLYTLGCGEQGQLGRVPELFANRGGRQGLE EQGQLGRVPELFANRGGRQGLERLLVPKCV R V P N R G 1 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 8 0 944.50797 P18754 P18754 207 214 RCC1 Regulator of chromosome condensation yes yes 2 0.017715 107.9 By MS/MS 7.5 1.12 1 1 1 1 4 8228800 8228800 0 15452 625 16384 39295;39296;39297;39298 27745 27745 1 176150 0 VPELNVQNGVLK CSPFTVLPALMNEYRVPELNVQNGVLKSLS EYRVPELNVQNGVLKSLSFLFEYIGEMGKD R V P L K S 0 0 2 0 0 1 1 1 0 0 2 1 0 0 1 0 0 0 0 3 0 0 12 0 1308.7402 O75533 O75533 1138 1149 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.022657 125.68 By MS/MS 3 0 1 1 1056900 1056900 0 15453 315 16385 39299 27746 27746 0 27589 0 VPENLLPFAVQCR YLYSCFQRAKEEITKVPENLLPFAVQCRNL TKVPENLLPFAVQCRNLTVSNTRTVLLTPE K V P C R N 1 1 1 0 1 1 1 0 0 0 2 0 0 1 2 0 0 0 0 2 0 0 13 0 1541.8024 Q14139 Q14139 191 203 UBE4A Ubiquitin conjugation factor E4 A yes yes 2 0.0052529 102.05 By MS/MS 3.5 0.5 1 1 2 654010 654010 0 15454 1408 16386 39300;39301 27747 27747 1 17519 0 VPFCPMVGSEVYSTEIK KTALALAIAQELGSKVPFCPMVGSEVYSTE FCPMVGSEVYSTEIKKTEVLMENFRRAIGL K V P I K K 0 0 0 0 1 0 2 1 0 1 0 1 1 1 2 2 1 0 1 3 0 0 17 0 1941.9216 Q9Y265 Q9Y265 91 107 RUVBL1 RuvB-like 1 yes yes 2 0.00013209 132.79 By MS/MS 6.33 0.471 2 1 3 10990000 10990000 0 15455 2870 16387;16388 39302;39303;39304 27748;27749 27748 1661 2 87158 0 VPFLPGDSDLDQLTR DMWAVGCILAELLLRVPFLPGDSDLDQLTR VPFLPGDSDLDQLTRIFETLGTPTEEQWPD R V P T R I 0 1 0 3 0 1 0 1 0 0 3 0 0 1 2 1 1 0 0 1 0 0 15 0 1671.8468 P50613 P50613 210 224 CDK7 Cyclin-dependent kinase 7 yes yes 2 0.0058031 104.24 By MS/MS 7.5 0.5 1 1 2 820230 820230 0 15456 950 16389 39305;39306 27750;27751 27751 2 32067 0 VPFLVAETPR SFLDDHHLTRPHPERVPFLVAETPRARHTL PHPERVPFLVAETPRARHTLDELNPQKSKH R V P P R A 1 1 0 0 0 0 1 0 0 0 1 0 0 1 2 0 1 0 0 2 0 0 10 0 1127.6339 Q13131 Q13131 375 384 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 2 0.00066487 138.4 By MS/MS 5.5 0.5 1 1 2 2707800 2707800 0 15457 1337 16390 39307;39308 27752 27752 1 25915 0 VPFLVLECPNLK ______________________________ LYRVPFLVLECPNLKLKKPPWLHMPSAMTV R V P L K L 0 0 1 0 1 0 1 0 0 0 3 1 0 1 2 0 0 0 0 2 0 0 12 0 1427.7847 Q9NRP0 Q9NRP0 7 18 OSTC Oligosaccharyltransferase complex subunit OSTC yes yes 2 0.0026715 117.71 By MS/MS 4 3.16 1 1 1 1 1 5 1211300 1211300 0 15458 2609 16391 39309;39310;39311;39312;39313 27753;27754;27755 27754 3 951750 0 VPFPLTLR GGWINMTFSGFVTTKVPFPLTLRFKPMLQQ SGFVTTKVPFPLTLRFKPMLQQGIELLTLD K V P L R F 0 1 0 0 0 0 0 0 0 0 2 0 0 1 2 0 1 0 0 1 0 0 8 0 941.56984 Q9P0I2 Q9P0I2 140 147 EMC3 ER membrane protein complex subunit 3 yes yes 2 0.03979 95.352 By MS/MS 8 0 1 1 530790 530790 0 15459 2725 16392 39314 27756 27756 1 35016 0 VPGLPTPIENMILR LSEAWRCWKANIPWKVPGLPTPIENMILRY KVPGLPTPIENMILRYVKAKADWWTNTAHY K V P L R Y 0 1 1 0 0 0 1 1 0 2 2 0 1 0 3 0 1 0 0 1 0 0 14 0 1548.8698 Q6P2Q9 Q6P2Q9 728 741 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.054049 61.958 By MS/MS 3 0.816 1 1 1 3 595140 595140 0 15460 1706 16393 39315;39316;39317 27757 27757 1 24891 0 VPGQEETVK ALSMIIKSLKNLASRVPGQEETVKNLEIFR KNLASRVPGQEETVKNLEIFRLKMILRLLQ R V P V K N 0 0 0 0 0 1 2 1 0 0 0 1 0 0 1 0 1 0 0 2 0 0 9 0 985.50803 Q93008 Q93008 321 329 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.0068818 143.03 By MS/MS 2 0 1 1 0 0 0 15461 2096 16394 39318 27758 27758 1 0 0 VPGVTDCVAEIQK VPEDEWQCEVCVAHKVPGVTDCVAEIQKNK HKVPGVTDCVAEIQKNKPYIRHEPIGYDRS K V P Q K N 1 0 0 1 1 1 1 1 0 1 0 1 0 0 1 0 1 0 0 3 0 0 13 0 1414.7126 Q12830 Q12830 439 451 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 2 0.00083361 133.42 By MS/MS 2 0.816 1 1 1 3 388090 388090 0 15462 1309 16395 39319;39320;39321 27759 27759 1 15781 0 VPIDGPPIDIGR PMHGVPCPAGAAVCKVPIDGPPIDIGRVAG VCKVPIDGPPIDIGRVAGPPILNPIANEIY K V P G R V 0 1 0 2 0 0 0 2 0 3 0 0 0 0 3 0 0 0 0 1 0 0 12 0 1247.6874 P11717 P11717 1715 1726 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.016451 89.827 By MS/MS 1.5 0.5 1 1 2 493730 493730 0 15463 557 16396 39322;39323 27760 27760 1 24434 0 VPINDVLAEDK AAKVRLKMPPVLEERVPINDVLAEDKILEG LEERVPINDVLAEDKILEGTETTKYVFTDI R V P D K I 1 0 1 2 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 11 0 1211.6398 P82650 P82650 136 146 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2 5.7711E-05 168.22 By MS/MS By MS/MS 7 0 2 1 1 32212000 31934000 278130 15464 1201 16397 39324;39325 27761;27762 27762 2 570670 1141800 VPINDVLAEDKILEGTETTK AAKVRLKMPPVLEERVPINDVLAEDKILEG VLAEDKILEGTETTKYVFTDISYSIPHRER R V P T K Y 1 0 1 2 0 0 3 1 0 2 2 2 0 0 1 0 3 0 0 2 0 0 20 1 2184.1525 P82650 P82650 136 155 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 2;3 3.328E-49 288.41 By MS/MS 7 0 2 2 10861000 10861000 0 15465 1201 16398 39326;39327 27763;27764 27764 2 194090 0 VPLEVQEADEAK QRLRERRAASGYPVKVPLEVQEADEAKLQQ PVKVPLEVQEADEAKLQQTEAELRKVDEAI K V P A K L 2 0 0 1 0 1 3 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 12 0 1326.6667 P26640 P26640 1231 1242 VARS Valine--tRNA ligase yes yes 2 0.0040373 110.93 By MS/MS 3 0 1 1 689320 689320 0 15466 699 16399 39328 27765 27765 1 17995 0 VPLFSPNFSEK AEFIMLNHFSQRYAKVPLFSPNFSEKVGVA RYAKVPLFSPNFSEKVGVAFDHMKVCFGDF K V P E K V 0 0 1 0 0 0 1 0 0 0 1 1 0 2 2 2 0 0 0 1 0 0 11 0 1263.6499 Q9BQ52 Q9BQ52 732 742 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.027236 82.831 By MS/MS 4.5 0.5 1 1 2 969220 969220 0 15467 2305 16400 39329;39330 27766 27766 1 28348 0 VPLIGSLPEAR WHRRTEELPLGRELRVPLIGSLPEARLRRV RELRVPLIGSLPEARLRRVVGQLDPQRLWS R V P A R L 1 1 0 0 0 0 1 1 0 1 2 0 0 0 2 1 0 0 0 1 0 0 11 0 1150.671 Q9NXS2 Q9NXS2 70 80 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes yes 2 0.0011594 131.52 By MS/MS 7 0 1 1 2726700 2726700 0 15468 2692 16401 39331 27767 27767 1 48726 0 VPLILVGNK KPMRDQIVRVKRYEKVPLILVGNKVDLEPE VKRYEKVPLILVGNKVDLEPEREVMSSEGR K V P N K V 0 0 1 0 0 0 0 1 0 1 2 1 0 0 1 0 0 0 0 2 0 0 9 0 951.6117 Q9Y3L5 Q9Y3L5 109 117 RAP2C Ras-related protein Rap-2c yes yes 2 0.0084283 108.24 By MS/MS 7 2 1 1 2 2148400 2148400 0 15469 2940 16402 39332;39333 27768;27769 27768 2 181050 0 VPLSTVLLDPTR GTHNCRNRNSFKLSRVPLSTVLLDPTRSCT LSRVPLSTVLLDPTRSCTQPRGAFADGHVL R V P T R S 0 1 0 1 0 0 0 0 0 0 3 0 0 0 2 1 2 0 0 2 0 0 12 0 1309.7606 Q9Y2I1 Q9Y2I1 946 957 NISCH Nischarin yes yes 2 7.5075E-05 160.53 By MS/MS 2 0.816 1 1 1 3 566460 566460 0 15470 2888 16403 39334;39335;39336 27770;27771 27770 2 24382 0 VPLVAPEDLR NHIHTGHHSSMFWMRVPLVAPEDLRDDIIE MFWMRVPLVAPEDLRDDIIENAPTTHTEEY R V P L R D 1 1 0 1 0 0 1 0 0 0 2 0 0 0 2 0 0 0 0 2 0 0 10 0 1107.6288 O14744 O14744 155 164 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 0.0043802 109.48 By MS/MS By MS/MS 5.43 2.06 1 2 2 1 1 5 2 11025000 10436000 588920 15471 125 16404 39337;39338;39339;39340;39341;39342;39343 27772;27773;27774 27774 3 402000 1758700 VPMTSGVK GVIDRCTHIRVGSTKVPMTSGVKQKIMSVI IRVGSTKVPMTSGVKQKIMSVIREWGSGSD K V P V K Q 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 2 0 0 8 0 817.43677 P16615 P16615 534 541 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 2 0.023129 102.71 By MS/MS 1.5 0.5 1 1 2 892740 892740 0 15472 608 16405 39344;39345 27775;27776 27775 2 43981 0 VPNVPQEALDK KPLVKSEEIQVIKEKVPNVPQEALDKLLSF IKEKVPNVPQEALDKLLSFTHKLRETQDPT K V P D K L 1 0 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 0 2 0 0 11 0 1208.6401 A3KMH1 A3KMH1 624 634 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.046135 77.744 By MS/MS 3 0.816 1 1 1 3 904210 904210 0 15473 13 16406 39346;39347;39348 27777 27777 1 34843 0 VPPTAAVAQVFER AGRPSGSTPLGPLARVPPTAAVAQVFERGN ARVPPTAAVAQVFERGNMNSEPEEEDGGLE R V P E R G 3 1 0 0 0 1 1 0 0 0 0 0 0 1 2 0 1 0 0 3 0 0 13 0 1383.751 Q8IVW6 Q8IVW6 72 84 ARID3B AT-rich interactive domain-containing protein 3B yes yes 2 0.010926 107.97 By MS/MS 5 0 1 1 1122900 1122900 0 15474 1859 16407 39349 27778 27778 0 46155 0 VPPVIVLENQGLR VLIMLDNQKLVPQPRVPPVIVLENQGLRWV PRVPPVIVLENQGLRWVPKDKNLVMWRDWE R V P L R W 0 1 1 0 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 3 0 0 13 0 1432.8402 Q9Y3B6 Q9Y3B6 127 139 EMC9 ER membrane protein complex subunit 9 yes yes 2 5.1355E-05 157.97 By MS/MS 9.5 0.5 1 1 2 679790 679790 0 15475 2926 16408 39350;39351 27779 27779 1 406660 0 VPPVQVSPLIK ______________________________ ______________________________ M V P I K L 0 0 0 0 0 1 0 0 0 1 1 1 0 0 3 1 0 0 0 3 0 0 11 0 1175.7278 P56385 P56385 2 12 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.0026257 117.7 By MS/MS By matching 10 0 2 1 1 8393500 8353900 39616 15476 1046 16409 39352;39353 27780;27781 27781 2 8879300 1016100 VPQIEVETHK YEVSISGEWSPWQAKVPQIEVETHKVAAPD PWQAKVPQIEVETHKVAAPDVVVPTLDTVR K V P H K V 0 0 0 0 0 1 2 0 1 1 0 1 0 0 1 0 1 0 0 2 0 0 10 0 1178.6295 Q14204 Q14204 2552 2561 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2;3 0.0050434 101.66 By MS/MS 2.2 1.17 2 1 1 1 5 4552100 4552100 0 15477 1421 16410 39354;39355;39356;39357;39358 27782;27783;27784 27783 3 201240 0 VPQVSTPTLVEVSR EYGFQNALIVRYTRKVPQVSTPTLVEVSRS KVPQVSTPTLVEVSRSLGKVGTRCCTKPES K V P S R S 0 1 0 0 0 1 1 0 0 0 1 0 0 0 2 2 2 0 0 4 0 0 14 0 1510.8355 CON__P02768-1;P02768;CON__P02769 CON__P02769 438 451 ALB Serum albumin no no 2 0.016708 84.169 By MS/MS 9.5 0.5 1 1 2 315310 315310 0 + 15478 43;42 16411 39359;39360 27785 27785 1 277930 0 VPSGGYSSINNVQDPQKPEPR DWGWEILQSFSRFTRVPSGGYSSINNVQDP SSINNVQDPQKPEPRDKMESFFLGETLKYL R V P P R D 0 1 2 1 0 2 1 2 0 1 0 1 0 0 4 3 0 0 1 2 0 0 21 1 2268.1135 Q9UKM7 Q9UKM7 633 653 MAN1B1 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase yes yes 3 0.0063009 65.374 By MS/MS 4.5 0.5 1 1 2 1244800 1244800 0 15479 2813 16412 39361;39362 27786 27786 1 46533 0 VPSGQNADVQK RIEPADAHVLQKNLKVPSGQNADVQKTDN_ KNLKVPSGQNADVQKTDN____________ K V P Q K T 1 0 1 1 0 2 0 1 0 0 0 1 0 0 1 1 0 0 0 2 0 0 11 0 1141.5728 Q9GZZ1 Q9GZZ1 156 166 NAA50 N-alpha-acetyltransferase 50 yes yes 2 0.01765 91.469 By MS/MS 9 0 1 1 143190 143190 0 15480 2445 16413 39363 27787 27787 1 82178 0 VPTANVSVVDLTCR VIPELNGKLTGMAFRVPTANVSVVDLTCRL RVPTANVSVVDLTCRLEKPAKYDDIKKVVK R V P C R L 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 2 0 0 4 0 0 14 0 1529.7872 P04406 P04406 235 248 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2;3 1.9357E-05 160.56 By MS/MS By matching 7.71 1.28 1 3 1 1 1 5 2 64540000 64498000 42249 15481 452 16414 39364;39365;39366;39367;39368;39369;39370 27788;27789;27790;27791;27792;27793;27794 27791 7 1773500 153690 VPTGLPFIK LIHFFGEEYLEYKKRVPTGLPFIKGVKVDL LEYKKRVPTGLPFIKGVKVDL_________ R V P I K G 0 0 0 0 0 0 0 1 0 1 1 1 0 1 2 0 1 0 0 1 0 0 9 0 970.58515 O60725 O60725 270 278 ICMT Protein-S-isoprenylcysteine O-methyltransferase yes yes 2 0.0021118 128.61 By MS/MS 1 0 1 1 1096400 1096400 0 15482 261 16415 39371 27795 27795 1 53570 0 VPTLAVPAISLPDDVR ______________________________ PTLAVPAISLPDDVRRRLKDLERDSLTEKE R V P V R R 2 1 0 2 0 0 0 0 0 1 2 0 0 0 3 1 1 0 0 3 0 0 16 0 1661.9352 P26358 P26358 10 25 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.013002 86.911 By MS/MS 3 0.816 1 1 1 3 281510 281510 0 15483 693 16416 39372;39373;39374 27796;27797 27796 2 10379 0 VPTTEKPTVTVNFR SVAYANMCRCLMALKVPTTEKPTVTVNFRK KVPTTEKPTVTVNFRKLLLNRCQKEFEKDK K V P F R K 0 1 1 0 0 0 1 0 0 0 0 1 0 1 2 0 4 0 0 3 0 0 14 1 1587.8621 Q04637 Q04637 827 840 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2;3 0.0018269 108.23 By MS/MS 2.8 0.748 2 2 1 5 6233400 6233400 0 15484 1264 16417 39375;39376;39377;39378;39379 27798;27799;27800;27801;27802 27802 4 247040 0 VPVHDVTDASK NVTYGGHQVPGSPFKVPVHDVTDASKVKCS SPFKVPVHDVTDASKVKCSGPGLSPGMVRA K V P S K V 1 0 0 2 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 3 0 0 11 0 1166.5932 P21333 P21333 1440 1450 FLNA Filamin-A yes yes 2 0.0022194 128.35 By MS/MS 2 0 1 1 0 0 0 15485 648 16418 39380 27803 27803 1 0 0 VPVLLEEQSIVK PEQVICIHDVSSTYRVPVLLEEQSIVKYFK TYRVPVLLEEQSIVKYFKERLHLPIGDSAS R V P V K Y 0 0 0 0 0 1 2 0 0 1 2 1 0 0 1 1 0 0 0 3 0 0 12 0 1352.7915 Q9NRF8 Q9NRF8 253 264 CTPS2 CTP synthase 2 yes yes 2 7.3984E-05 160.77 By MS/MS 6 0.816 1 1 1 3 1220000 1220000 0 15486 2604 16419 39381;39382;39383 27804 27804 1 31985 0 VPVNEVVIR YTYLISILKDMKQNRVPVNEVVIRQLEFAA DMKQNRVPVNEVVIRQLEFAAQYPPTFDRY R V P I R Q 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 4 0 0 9 0 1023.6077 O75127 O75127 618 626 PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes yes 2 0.0026132 123.21 By MS/MS By matching 5 0 2 1 1 4442200 4425600 16566 15487 280 16420 39384;39385 27805 27805 1 181910 49017 VPVNLLNSPDCDVK LRQTNKTKQSCPFGRVPVNLLNSPDCDVKT RVPVNLLNSPDCDVKTDDSVVPCFMKRQTS R V P V K T 0 0 2 2 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 3 0 0 14 0 1568.7868 P33981 P33981 274 287 TTK Dual specificity protein kinase TTK yes yes 2 0.00043313 134.18 By MS/MS 4.5 0.5 1 1 2 784300 784300 0 15488 772 16421 39386;39387 27806 27806 1 22600 0 VPVPPNVAFELDR LDFYHSFLEKTAVLRVPVPPNVAFELDRTR LRVPVPPNVAFELDRTRADLISEDVQRRFV R V P D R T 1 1 1 1 0 0 1 0 0 0 1 0 0 1 3 0 0 0 0 3 0 0 13 0 1451.7773 Q92888 Q92888 112 124 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 2 0.024461 80.979 By MS/MS 4 0 1 1 616070 616070 0 15489 2085 16422 39388 27807 27807 1 16818 0 VPVVFVTNAGNILQHSK LKAFRRLVNSQGQLRVPVVFVTNAGNILQH VVFVTNAGNILQHSKAQELSALLGCEVDAD R V P S K A 1 0 2 0 0 1 0 1 1 1 1 1 0 1 1 1 1 0 0 4 0 0 17 0 1822.0101 Q9BXW7 Q9BXW7 83 99 CECR5 Cat eye syndrome critical region protein 5 yes yes 3 0.0073481 83.106 By MS/MS 7 0 1 1 847140 847140 0 15490 2404 16423 39389 27808 27808 1 15139 0 VQAEYNSIK ITLNDLKPAMDYHAKVQAEYNSIKGTPSEA MDYHAKVQAEYNSIKGTPSEAEIFTTLSCE K V Q I K G 1 0 1 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 9 0 1050.5346 Q9Y2H6 Q9Y2H6 347 355 FNDC3A Fibronectin type-III domain-containing protein 3A yes yes 2 0.03947 85.731 By MS/MS 3.5 0.5 1 1 2 542190 542190 0 15491 2887 16424 39390;39391 27809 27809 1 14331 0 VQAHAAAALINFTEDCPK IAALLQTMEDQGNQRVQAHAAAALINFTED HAAAALINFTEDCPKSLLIPYLDNLVKHLH R V Q P K S 5 0 1 1 1 1 1 0 1 1 1 1 0 1 1 0 1 0 0 1 0 0 18 0 1954.9571 O00410 O00410 458 475 IPO5 Importin-5 yes yes 3 0.0044106 90.498 By MS/MS 4.5 0.5 1 1 2 2856800 2856800 0 15492 91 16425 39392;39393 27810 27810 1 80244 0 VQALEEANNDLENK TMQELNSRLASYLDKVQALEEANNDLENKI KVQALEEANNDLENKIQDWYDKKGPAAIQK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1585.7584 P35527;CON__P35527 P35527 171 184 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 7.0721E-73 309.35 By MS/MS By MS/MS 4.67 2.87 2 2 3 1 2 1 1 2 1 5 10 6727100 1802500 4924600 + 15493 791 16426 39394;39395;39396;39397;39398;39399;39400;39401;39402;39403;39404;39405;39406;39407;39408 27811;27812;27813;27814;27815;27816;27817;27818;27819;27820;27821;27822;27823;27824;27825;27826;27827;27828 27823 17 415080 8909800 VQAMQPAFASK LPAHRQALGERLYPRVQAMQPAFASKITGM LYPRVQAMQPAFASKITGMLLELSPAQLLL R V Q S K I 3 0 0 0 0 2 0 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 11 0 1176.5961 O95071 O95071 2405 2415 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.00015322 153.97 By MS/MS 1.8 0.748 2 2 1 5 1932600 1932600 0 15494 364 16427;16428 39409;39410;39411;39412;39413 27829;27830;27831;27832 27830 197 4 91199 0 VQAQGPGLK SPFKVAVTEGCQPSRVQAQGPGLKEAFTNK GCQPSRVQAQGPGLKEAFTNKPNVFTVVTR R V Q L K E 1 0 0 0 0 2 0 2 0 0 1 1 0 0 1 0 0 0 0 1 0 0 9 0 896.50797 O75369 O75369 1331 1339 FLNB Filamin-B yes yes 2 0.0034178 119.17 By MS/MS 2 0 1 1 187820 187820 0 15495 300 16429 39414 27833 27833 1 9335.4 0 VQAQVIQETIVPK MQQQQQTTQQQLPQKVQAQVIQETIVPKEP QKVQAQVIQETIVPKEPPPEFEFIADPPSI K V Q P K E 1 0 0 0 0 3 1 0 0 2 0 1 0 0 1 0 1 0 0 3 0 0 13 0 1451.8348 Q15459 Q15459 132 144 SF3A1 Splicing factor 3A subunit 1 yes yes 2 3.6352E-18 229.68 By MS/MS By matching 4 0 2 1 1 1954100 1918400 35753 15496 1504 16430 39415;39416 27834 27834 1 52370 74709 VQDAVQQHQQK ASEDGVLTEAMMDTRVQDAVQQHQQKMCWL MDTRVQDAVQQHQQKMCWLKAEGPGRGDEP R V Q Q K M 1 0 0 1 0 5 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 11 0 1307.6582 Q9NVI7 Q9NVI7 606 616 ATAD3A ATPase family AAA domain-containing protein 3A yes yes 2;3 9.0828E-11 204.34 By MS/MS 5.33 0.471 2 1 3 17106000 17106000 0 15497 2655 16431 39417;39418;39419 27835;27836;27837 27837 3 324510 0 VQDDEVGDGTTSVTVLAAELLR GVDNPAAKVLVDMSRVQDDEVGDGTTSVTV DGTTSVTVLAAELLREAESLIAKKIHPQTI R V Q L R E 2 1 0 3 0 1 2 2 0 0 3 0 0 0 0 1 3 0 0 4 0 0 22 0 2287.1543 P78371 P78371 90 111 CCT2 T-complex protein 1 subunit beta yes yes 2;3;4 5.4334E-107 327.7 By MS/MS 6.05 1.61 1 2 2 10 1 1 1 1 19 213010000 213010000 0 15498 1195 16432 39420;39421;39422;39423;39424;39425;39426;39427;39428;39429;39430;39431;39432;39433;39434;39435;39436;39437;39438 27838;27839;27840;27841;27842;27843;27844;27845;27846;27847;27848;27849;27850;27851;27852;27853;27854 27840 17 1736900 0 VQDDIKESVR DIIDKLPEIWETLFRVQDDIKESVRKAAEL ETLFRVQDDIKESVRKAAELALKTLSKVCV R V Q V R K 0 1 0 2 0 1 1 0 0 1 0 1 0 0 0 1 0 0 0 2 0 0 10 1 1187.6146 Q5VYK3 Q5VYK3 1212 1221 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00028818 172.56 By MS/MS 3 0 1 1 0 0 0 15499 1657 16433 39439 27855 27855 1 0 0 VQDLSAGGQGSLTDSGPER LCRALQTERNDLNKRVQDLSAGGQGSLTDS SAGGQGSLTDSGPERRPEGPGAQAPSSPRV R V Q E R R 1 1 0 2 0 2 1 4 0 0 2 0 0 0 1 3 1 0 0 1 0 0 19 0 1872.8813 P40222 P40222 485 503 TXLNA Alpha-taxilin yes yes 2 7.4673E-56 274.02 By MS/MS 5 0 1 1 1473600 1473600 0 15500 827 16434 39440 27856 27856 1 60569 0 VQDSAPVETPR SPSRAPGLRQRASNKVQDSAPVETPRGKPP ASNKVQDSAPVETPRGKPPLNTRSQAPLLR K V Q P R G 1 1 0 1 0 1 1 0 0 0 0 0 0 0 2 1 1 0 0 2 0 0 11 0 1197.599 P09601 P09601 244 254 HMOX1 Heme oxygenase 1 yes yes 2 4.5506E-07 206.49 By MS/MS 8 0 1 1 1759600 1759600 0 15501 517 16435 39441 27857 27857 1 116080 0 VQEAIIHFR QALLLKGAALRNMGRVQEAIIHFREAIRLA LRNMGRVQEAIIHFREAIRLAPCRLDCYEG R V Q F R E 1 1 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1111.6138 Q9UJX3 Q9UJX3 389 397 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 2 0.0041621 117.53 By MS/MS 6 0 1 1 0 0 0 15502 2803 16436 39442 27858 27858 1 0 0 VQEAVESMVK ______________________________ LQQLRVQEAVESMVKSLERENIRKMQGLMF R V Q V K S 1 0 0 0 0 1 2 0 0 0 0 1 1 0 0 1 0 0 0 3 0 0 10 0 1118.5642 Q96C01 Q96C01 9 18 FAM136A Protein FAM136A yes yes 2 0.0099936 96.113 By MS/MS 10 0 2 2 397710 397710 0 15503 2134 16437;16438 39443;39444 27859;27860 27859 1385 2 422730 0 VQEIQVVK EGQGVEICFELYNPRVQEIQVVKLEKRLDD FELYNPRVQEIQVVKLEKRLDDSLLYLRDA R V Q V K L 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 3 0 0 8 0 941.55458 P49406 P49406 171 178 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.0041329 141.52 By MS/MS 8 0 1 1 3941500 3941500 0 15504 917 16439 39445 27861 27861 1 260020 0 VQEIQVVKLEK EGQGVEICFELYNPRVQEIQVVKLEKRLDD YNPRVQEIQVVKLEKRLDDSLLYLRDALPE R V Q E K R 0 0 0 0 0 2 2 0 0 1 1 2 0 0 0 0 0 0 0 3 0 0 11 1 1311.7762 P49406 P49406 171 181 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2;3 7.726E-06 205.52 By MS/MS 8 0 2 2 3534800 3534800 0 15505 917 16440 39446;39447 27862;27863 27863 2 233190 0 VQEIVGALR STLMKATVLMRQPGRVQEIVGALRKGGGDR MRQPGRVQEIVGALRKGGGDRLQVISDFDM R V Q L R K 1 1 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 9 0 983.57638 Q969T7 Q969T7 21 29 NT5C3B 7-methylguanosine phosphate-specific 5-nucleotidase yes yes 2 0.00095945 143.03 By MS/MS 8 0 1 1 946900 946900 0 15506 2108 16441 39448 27864 27864 1 62467 0 VQELETSLAELR QVHTLREEKECSMSRVQELETSLAELRNQM MSRVQELETSLAELRNQMAEPPPPEPPAGP R V Q L R N 1 1 0 0 0 1 3 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1386.7355 Q08379 Q08379 432 443 GOLGA2 Golgin subfamily A member 2 yes yes 2 6.892E-17 227.81 By MS/MS 3 0 1 1 1230600 1230600 0 15507 1288 16442 39449 27865 27865 1 32126 0 VQELGHGCAALVTK VAAENEEIGSHIKHRVQELGHGCAALVTKA RVQELGHGCAALVTKAGALQCSPSDAYTKK R V Q T K A 2 0 0 0 1 1 1 2 1 0 2 1 0 0 0 0 1 0 0 2 0 0 14 0 1481.766 Q9Y490 Q9Y490 1920 1933 TLN1 Talin-1 yes yes 2 0.013056 96.866 By MS/MS 2 0 1 1 236900 236900 0 15508 2947 16443 39450 27866 27866 1 11775 0 VQELQQQSAR RQDEVLQARAQELQKVQELQQQSAREVGEL QELQKVQELQQQSAREVGELQGRVAQLEEE K V Q A R E 1 1 0 0 0 4 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1185.6102 Q7Z406 Q7Z406 881 890 MYH14 Myosin-14 yes yes 2 9.3991E-07 183.67 By MS/MS 2 0 1 1 207850 207850 0 15509 1788 16444 39451 27867 27867 1 10331 0 VQEMVESNEAK EKLFGEKGSDRFRQKVQEMVESNEAKLVAL FRQKVQEMVESNEAKLVALVNKFIGYLKQN K V Q A K L 1 0 1 0 0 1 3 0 0 0 0 1 1 0 0 1 0 0 0 2 0 0 11 0 1262.5813 Q14C86 Q14C86 247 257 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0041369 103.34 By MS/MS 2 0 1 1 141160 141160 0 15510 1455 16445 39452 27868 27868 1144 1 7016.5 0 VQENCIDLVGR LLPRLTPILKNRHEKVQENCIDLVGRIADR RHEKVQENCIDLVGRIADRGAEYVSAREWM K V Q G R I 0 1 1 1 1 1 1 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 11 0 1301.6398 O75533 O75533 1031 1041 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0001622 156.48 By MS/MS By MS/MS 3 0 2 1 1 6110900 6058600 52266 15511 315 16446 39453;39454 27869;27870 27870 2 158160 74907 VQEQELTR QKANSSATETINKLKVQEQELTRLRIDYER ETINKLKVQEQELTRLRIDYERVSQERTVK K V Q T R L 0 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 1001.5142 P15924 P15924 1530 1537 DSP Desmoplakin yes yes 2 0.006471 131.62 By MS/MS 2 0 1 1 370570 370570 0 15512 603 16447 39455 27871 27871 1 18419 0 VQEQLGNDVVEK QKIKIGVVGGSDFEKVQEQLGNDVVEKYDY FEKVQEQLGNDVVEKYDYVFPENGLVAYKD K V Q E K Y 0 0 1 1 0 2 2 1 0 0 1 1 0 0 0 0 0 0 0 3 0 0 12 0 1356.6885 O15305 O15305 52 63 PMM2 Phosphomannomutase 2 yes yes 2 3.3856E-06 176.18 By MS/MS 8 0 1 1 1026700 1026700 0 15513 168 16448 39456 27872 27872 1 67730 0 VQESADELQK TQGLIFVVDSNDRERVQESADELQKMLQED NDRERVQESADELQKMLQEDELRDAVLLVF R V Q Q K M 1 0 0 1 0 2 2 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1145.5564 P84085 P84085 100 109 ARF5 ADP-ribosylation factor 5 yes yes 2 4.8738E-11 210.64 By MS/MS By matching 9.67 0.471 1 2 2 1 3658200 3636200 22014 15514 1215 16449 39457;39458;39459 27873;27874 27873 2 2867500 564650 VQEVVQVLR LEHWRQPELERRFSRVQEVVQVLRALRATY ERRFSRVQEVVQVLRALRATYQLTKARPRV R V Q L R A 0 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 9 0 1068.6291 Q5ST30 Q5ST30 906 914 VARS2 Valine--tRNA ligase, mitochondrial yes yes 2 0.0038742 118.18 By MS/MS 4 0 1 1 12856000 12856000 0 15515 1619 16450 39460 27875 27875 1 350950 0 VQFCPFEK AALARLGLRPVKQVRVQFCPFEKNVESTRT RPVKQVRVQFCPFEKNVESTRTFLQTVSSE R V Q E K N 0 0 0 0 1 1 1 0 0 0 0 1 0 2 1 0 0 0 0 1 0 0 8 0 1053.4954 Q96EL3 Q96EL3 18 25 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 2 0.0070472 129.47 By MS/MS 10 0 1 1 2293100 2293100 0 15516 2163 16451 39461 27876 27876 1 2437400 0 VQFCPFEKNVESTR AALARLGLRPVKQVRVQFCPFEKNVESTRT RVQFCPFEKNVESTRTFLQTVSSEKVRSTN R V Q T R T 0 1 1 0 1 1 2 0 0 0 0 1 0 2 1 1 1 0 0 2 0 0 14 1 1739.8301 Q96EL3 Q96EL3 18 31 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 3 0.0020038 106.58 By MS/MS 10 0 1 1 860310 860310 0 15517 2163 16452 39462 27877 27877 1 914410 0 VQFMYGEDPSNAMPVIFGK NFANRQGSARNITVKVQFMYGEDPSNAMPV YGEDPSNAMPVIFGKSSCSEFSKEAYTAVV K V Q G K S 1 0 1 1 0 1 1 2 0 1 0 1 2 2 2 1 0 0 1 2 0 0 19 0 2128.9962 Q96N67 Q96N67 587 605 DOCK7 Dedicator of cytokinesis protein 7 yes yes 2 0.0044039 70.373 By MS/MS 2.5 0.5 1 1 2 546560 546560 0 15518 2230 16453 39463;39464 27878 27878 1412;1413 1 22504 0 VQGDYFETLLYK SCIAVPPLEGFVMNRVQGDYFETLLYKIFV MNRVQGDYFETLLYKIFVSIDEHTNVAELA R V Q Y K I 0 0 0 1 0 1 1 1 0 0 2 1 0 1 0 0 1 0 2 1 0 0 12 0 1474.7344 Q658Y4 Q658Y4 246 257 FAM91A1 Protein FAM91A1 yes yes 2 5.6967E-05 164.48 By MS/MS 4.5 0.5 1 1 2 1519500 1519500 0 15519 1668 16454 39465;39466 27879 27879 1 43743 0 VQGFLQALELK RRTRLHKLSARREERVQGFLQALELKRADW REERVQGFLQALELKRADWLARLGTASA__ R V Q L K R 1 0 0 0 0 2 1 1 0 0 3 1 0 1 0 0 0 0 0 1 0 0 11 0 1244.7129 Q86SQ9 Q86SQ9 310 320 DHDDS Dehydrodolichyl diphosphate syntase complex subunit DHDDS yes yes 2 0.0089796 99.283 By MS/MS 9 0.816 1 1 1 3 330690 330690 0 15520 1813 16455 39467;39468;39469 27880 27880 1 160100 0 VQGGALEDSQLVAGVAFK MLDDLLQLKMIGIKKVQGGALEDSQLVAGV GALEDSQLVAGVAFKKTFSYAGFEMQPKKY K V Q F K K 3 0 0 1 0 2 1 3 0 0 2 1 0 1 0 1 0 0 0 3 0 0 18 0 1787.9418 Q99832 Q99832 200 217 CCT7 T-complex protein 1 subunit eta yes yes 2;3 3.1938E-83 319.64 By MS/MS By matching 6 0 4 3 1 165120000 165110000 15564 15521 2295 16456 39470;39471;39472;39473 27881;27882;27883;27884 27882 4 1287500 47732 VQGGALEDSQLVAGVAFKK MLDDLLQLKMIGIKKVQGGALEDSQLVAGV ALEDSQLVAGVAFKKTFSYAGFEMQPKKYH K V Q K K T 3 0 0 1 0 2 1 3 0 0 2 2 0 1 0 1 0 0 0 3 0 0 19 1 1916.0367 Q99832 Q99832 200 218 CCT7 T-complex protein 1 subunit eta yes yes 2;3 7.0358E-14 196.37 By MS/MS 6.6 0.8 3 1 1 5 208280000 208280000 0 15522 2295 16457 39474;39475;39476;39477;39478 27885;27886;27887 27887 3 1634800 0 VQGSDSDEEVVVATTR KEKVEFGVLVSFAYKVQGSDSDEEVVVATT QGSDSDEEVVVATTRIETMLGDVAVAVHPK K V Q T R I 1 1 0 2 0 1 2 1 0 0 0 0 0 0 0 2 2 0 0 4 0 0 16 0 1690.801 P26640 P26640 522 537 VARS Valine--tRNA ligase yes yes 2 6.8051E-29 241.42 By MS/MS 4 0.816 1 1 1 3 5142500 5142500 0 15523 699 16458 39479;39480;39481 27888;27889 27889 2 142750 0 VQHITDATLAIVK TSSLSHTLFAESGNKVQHITDATLAIVKGE NKVQHITDATLAIVKGETVPLDVLQIKGEK K V Q V K G 2 0 0 1 0 1 0 0 1 2 1 1 0 0 0 0 2 0 0 2 0 0 13 0 1407.8086 Q53H12 Q53H12 172 184 AGK Acylglycerol kinase, mitochondrial yes yes 2;3 1.5095E-07 195.72 By MS/MS By matching 7.17 0.687 1 3 2 5 1 33907000 33891000 16604 15524 1587 16459 39482;39483;39484;39485;39486;39487 27890;27891 27891 2 659410 68162 VQIAEAINLQDK DHTDPEDNEIVCFLKVQIAEAINLQDKNLM FLKVQIAEAINLQDKNLMAQLQETMRCVCR K V Q D K N 2 0 1 1 0 2 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 12 0 1340.73 Q14C86 Q14C86 1164 1175 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0048122 107.09 By MS/MS 2.5 0.5 1 1 2 330450 330450 0 15525 1455 16460 39488;39489 27892 27892 1 12765 0 VQIAVANAQELLQR GSGKLDPGLIMEQVKVQIAVANAQELLQRM KVQIAVANAQELLQRMTDKCFRKCIGKPGG K V Q Q R M 3 1 1 0 0 3 1 0 0 1 2 0 0 0 0 0 0 0 0 2 0 0 14 0 1551.8733 Q9Y5L4 Q9Y5L4 28 41 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 6.5399E-18 253.97 By MS/MS 10 0 1 1 692470 692470 0 15526 2975 16461 39490 27893 27893 1 736020 0 VQIEHISSLIK LLEQNLIRVIEPFSRVQIEHISSLIKLSKA PFSRVQIEHISSLIKLSKADVERKLSQMIL R V Q I K L 0 0 0 0 0 1 1 0 1 3 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1265.7343 O00231 O00231 345 355 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2;3 0.0029001 145.28 By MS/MS 6.5 0.5 2 2 4 19023000 19023000 0 15527 80 16462 39491;39492;39493;39494 27894;27895;27896 27895 3 303410 0 VQKAEVGSPL TQRPPYCDGTHRSERVQKAEVGSPL_____ HRSERVQKAEVGSPL_______________ R V Q P L - 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 10 1 1026.571 P0C7P0 P0C7P0 118 127 CISD3 CDGSH iron-sulfur domain-containing protein 3, mitochondrial yes yes 2 0.00588 131.11 By MS/MS 10 0 1 1 169530 169530 0 15528 525 16463 39495 27897 27897 1 180190 0 VQLAEDLKK AEDGEKKIKLLTGKRVQLAEDLKKVREIQE LLTGKRVQLAEDLKKVREIQEKLDAFIEAL R V Q K K V 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 9 1 1042.6023 O60313 O60313 933 941 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 3 0.001765 120.45 By MS/MS 4.5 0.5 1 1 2 579410 579410 0 15529 244 16464 39496;39497 27898 27898 1 18477 0 VQLDLAETDLSQGVAR SNSSFMSRERELLGKVQLDLAETDLSQGVA QLDLAETDLSQGVARWYDLMDNKDKGSS__ K V Q A R W 2 1 0 2 0 2 1 1 0 0 3 0 0 0 0 1 1 0 0 2 0 0 16 0 1713.8897 Q9BSJ8 Q9BSJ8 1076 1091 ESYT1 Extended synaptotagmin-1 yes yes 2 6.3676E-29 288.29 By MS/MS 5.67 3.09 1 1 1 3 5229400 5229400 0 15530 2339 16465 39498;39499;39500 27899;27900;27901 27899 3 367820 0 VQLGDQTDSK LAAVTGRTKPPQLLKVQLGDQTDSKMLLGM PQLLKVQLGDQTDSKMLLGMYRCTDVPGEF K V Q S K M 0 0 0 2 0 2 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 10 0 1089.5302 Q9NU22 Q9NU22 357 366 MDN1 Midasin yes yes 2 0.0078435 100.82 By MS/MS 1.5 0.5 1 1 2 765390 765390 0 15531 2635 16466 39501;39502 27902;27903 27902 2 37649 0 VQLPAYLK ______________________________ SVARIVKVQLPAYLKRLPVPESITGFARLT K V Q L K R 1 0 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 8 0 930.55385 Q8N5K1 Q8N5K1 12 19 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 0.021059 105.39 By MS/MS 10 0 1 1 755130 755130 0 15532 1921 16467 39503 27904 27904 1 802630 0 VQLSGPQEAEK TKTFLTLSLQDMASRVQLSGPQEAEKYVLH MASRVQLSGPQEAEKYVLHMIEDGEIFASI R V Q E K Y 1 0 0 0 0 2 2 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1184.6037 Q9UNS2 Q9UNS2 326 336 COPS3 COP9 signalosome complex subunit 3 yes yes 2 0.00020246 154.84 By MS/MS 7 0 1 1 2297000 2297000 0 15533 2847 16468 39504 27905 27905 1 41048 0 VQNATLAVANITNADSATR KDSVTISVDGVVYYRVQNATLAVANITNAD TLAVANITNADSATRLLAQTTLRNVLGTKN R V Q T R L 5 1 3 1 0 1 0 0 0 1 1 0 0 0 0 1 3 0 0 2 0 0 19 0 1928.9916 P27105 P27105 126 144 STOM Erythrocyte band 7 integral membrane protein yes yes 2 7.4697E-26 221.34 By MS/MS 8 0 1 1 1430200 1430200 0 15534 701 16469 39505 27906 27906 1 94348 0 VQNMALYADVGGK ETVFIVEISLTCKNRVQNMALYADVGGKQF NRVQNMALYADVGGKQFPVTRGQDVGRYQV R V Q G K Q 2 0 1 1 0 1 0 2 0 0 1 1 1 0 0 0 0 0 1 2 0 0 13 0 1364.6758 P51571 P51571 61 73 SSR4 Translocon-associated protein subunit delta yes yes 2 1.7087E-12 211.46 By MS/MS 9.5 0.5 1 1 2 3302200 3302200 0 15535 968 16470 39506;39507 27907;27908 27908 730 2 3060500 0 VQNNNTLR YVLRRIQQLEDEVKRVQNNNTLRKEEKIAI LEDEVKRVQNNNTLRKEEKIAIMREKHTAL R V Q L R K 0 1 3 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 957.49919 Q96Q15 Q96Q15 1991 1998 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.019809 107.01 By MS/MS 1.5 0.5 1 1 2 171590 171590 0 15536 2241 16471 39508;39509 27909 27909 1 8470.4 0 VQPVIGENGGDAR FALLGTWDEKMECFKVQPVIGENGGDARQR FKVQPVIGENGGDARQRGHEAEESRVMLWK K V Q A R Q 1 1 1 1 0 1 1 3 0 1 0 0 0 0 1 0 0 0 0 2 0 0 13 0 1310.6579 P22059 P22059 655 667 OSBP Oxysterol-binding protein 1 yes yes 2 0.002927 114.72 By MS/MS 4 0 1 1 445040 445040 0 15537 654 16472 39510 27910 27910 1 12149 0 VQQLMAK IHKEAEMEEHREHIKVQQLMAKGSDKRRGG EEHREHIKVQQLMAKGSDKRRGGPPGPPIS K V Q A K G 1 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 7 0 816.45276 Q04637 Q04637 1020 1026 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.016832 118.69 By MS/MS 1.8 0.748 2 2 1 5 3866000 3866000 0 15538 1264 16473;16474 39511;39512;39513;39514;39515 27911;27912 27911 1028 2 190520 0 VQQLVAK VHRQLGEANEEFALRVQQLVAKELGQTGTR ANEEFALRVQQLVAKELGQTGTRLTPADKA R V Q A K E 1 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 7 0 784.48069 Q9Y679 Q9Y679 244 250 AUP1 Ancient ubiquitous protein 1 yes yes 2 0.015603 138.48 By MS/MS By matching 7.33 0.471 2 1 2 1 12249000 12217000 31394 15539 2997 16475 39516;39517;39518 27913;27914 27913 2 233440 128880 VQQQEDEITVLK STSDVQDRLSALESRVQQQEDEITVLKAAL ESRVQQQEDEITVLKAALADVLRRLAISED R V Q L K A 0 0 0 1 0 3 2 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 12 0 1428.746 Q9HC35 Q9HC35 31 42 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 2 8.4089E-05 158.56 By MS/MS 1 0 1 1 573130 573130 0 15540 2557 16476 39519 27915 27915 1 28002 0 VQQTVQDLFGR IGEVILVGGMTRMPKVQQTVQDLFGRAPSK RMPKVQQTVQDLFGRAPSKAVNPDEAVAIG K V Q G R A 0 1 0 1 0 3 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 11 0 1289.6728 P38646 P38646 395 405 HSPA9 Stress-70 protein, mitochondrial yes yes 2 3.8361E-22 242.35 By MS/MS By MS/MS 5 1.2 1 1 3 1 1 6 1 98947000 98616000 331050 15541 820 16477 39520;39521;39522;39523;39524;39525;39526 27916;27917;27918;27919;27920;27921;27922 27919 7 3506700 979590 VQSAAPAR FYPSRAQPPSSAASRVQSAAPARPGPAAHV PSSAASRVQSAAPARPGPAAHVYPAGSQVM R V Q A R P 3 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 8 0 798.4348 Q04637 Q04637 66 73 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.0036449 145.16 By MS/MS 2 0.816 1 1 1 3 3409800 3409800 0 15542 1264 16478 39527;39528;39529 27923 27923 1 161390 0 VQSGNINAAK VLVLSQNTKRESGRKVQSGNINAAKTIADI ESGRKVQSGNINAAKTIADIIRTCLGPKSM K V Q A K T 2 0 2 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 10 0 1000.5302 P49368 P49368 22 31 CCT3 T-complex protein 1 subunit gamma yes yes 2 6.6547E-07 191.45 By MS/MS By matching 7.44 1.83 2 1 2 1 1 2 7 2 92566000 92531000 34595 15543 916 16479 39530;39531;39532;39533;39534;39535;39536;39537;39538 27924;27925;27926;27927;27928;27929 27925 6 2256000 134720 VQSVEQIR RRNTWLYQALREGTRVQSVEQIREVASGAA ALREGTRVQSVEQIREVASGAARIRGETLG R V Q I R E 0 1 0 0 0 2 1 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 8 0 957.52434 P56545;Q13363 P56545 162 169 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 2 0.0031707 150.36 By MS/MS By matching 7 0 2 1 1 6516000 6498200 17834 15544 1047;1360 16480 39539;39540 27930 27930 1 116120 73212 VQTFPFLGR NFDLPYLISRAQTLKVQTFPFLGRVAGLCS RAQTLKVQTFPFLGRVAGLCSNIRDSSFQS K V Q G R V 0 1 0 0 0 1 0 1 0 0 1 0 0 2 1 0 1 0 0 1 0 0 9 0 1063.5815 P28340 P28340 415 423 POLD1 DNA polymerase delta catalytic subunit yes yes 2 0.0065163 112.41 By MS/MS 3.5 0.5 1 1 2 969690 969690 0 15545 719 16481 39541;39542 27931;27932 27931 2 25572 0 VQTLNEQDWER PQKGRLAALRDEPSKVQTLNEQDWERAQQA EPSKVQTLNEQDWERAQQASVLANVAQAFE K V Q E R A 0 1 1 1 0 2 2 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 11 0 1416.6634 Q13136 Q13136 570 580 PPFIA1 Liprin-alpha-1 yes yes 2 0.019768 89.561 By MS/MS 3 0 1 1 200630 200630 0 15546 1338 16482 39543 27933 27933 1 5237.5 0 VQTLSNQPLLK AAYNPGQAVPWNAVKVQTLSNQPLLKSPAP NAVKVQTLSNQPLLKSPAPPLLHVAALGQK K V Q L K S 0 0 1 0 0 2 0 0 0 0 3 1 0 0 1 1 1 0 0 1 0 0 11 0 1239.7187 Q8N163 Q8N163 113 123 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 0.0027703 137.95 By MS/MS 3 0 1 1 4046600 4046600 0 15547 1895 16483 39544 27934 27934 1 105640 0 VQTRLEETQALLR KLDSAAKDADERIEKVQTRLEETQALLRKK EKVQTRLEETQALLRKKEKEFEETMDALQA K V Q L R K 1 2 0 0 0 2 2 0 0 0 3 0 0 0 0 0 2 0 0 1 0 0 13 1 1555.8682 Q14203 Q14203 994 1006 DCTN1 Dynactin subunit 1 yes yes 3 0.026438 69.352 By MS/MS 3 0 1 1 1036900 1036900 0 15548 1420 16484 39545 27935 27935 1 27069 0 VQTSIAVCK ARIILDEAHNVKNPRVQTSIAVCKLQACAR NVKNPRVQTSIAVCKLQACARWAVTGTPIQ R V Q C K L 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 1 0 0 2 0 0 9 0 1004.5325 Q9UNY4 Q9UNY4 747 755 TTF2 Transcription termination factor 2 yes yes 2 0.0013336 136.99 By MS/MS 3 0 1 1 680070 680070 0 15549 2848 16485 39546 27936 27936 1 17753 0 VQVALEELQDLK LELTDTGLLSGSEERVQVALEELQDLKGVW EERVQVALEELQDLKGVWSELSKVWEQIDQ R V Q L K G 1 0 0 1 0 2 2 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 12 0 1383.7609 Q14204 Q14204 1319 1330 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.00017932 153.63 By MS/MS 2 0.816 1 1 1 3 1285300 1285300 0 15550 1421 16486 39547;39548;39549 27937;27938;27939 27937 3 56423 0 VQVEYKGETK KHWPFMVVNDAGRPKVQVEYKGETKSFYPE AGRPKVQVEYKGETKSFYPEEVSSMVLTKM K V Q T K S 0 0 0 0 0 1 2 1 0 0 0 2 0 0 0 0 1 0 1 2 0 0 10 1 1179.6136 P11142;P54652 P11142 103 112 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 0.00015549 176.6 By MS/MS By MS/MS 6.4 1.74 3 1 1 4 1 67833000 67669000 164250 15551 546 16487 39550;39551;39552;39553;39554 27940;27941;27942;27943 27941 4 2844500 486000 VQVQDNEGCPVEALVK EFTVDAKHGGKAPLRVQVQDNEGCPVEALV QVQDNEGCPVEALVKDNGNGTYSCSYVPRK R V Q V K D 1 0 1 1 1 2 2 1 0 0 1 1 0 0 1 0 0 0 0 4 0 0 16 0 1783.8774 P21333 P21333 709 724 FLNA Filamin-A yes yes 2 2.9504E-21 263.89 By MS/MS 3 1.41 1 1 1 1 1 5 4002700 4002700 0 15552 648 16488 39555;39556;39557;39558;39559 27944;27945 27944 2 166940 0 VQVSYKGETK KHWPFQVINDGDKPKVQVSYKGETKAFYPE GDKPKVQVSYKGETKAFYPEEISSMVLTKM K V Q T K A 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 1 1 0 1 2 0 0 10 1 1137.603 P0DMV9;P0DMV8 P0DMV9 103 112 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2;3 0.0041856 142.36 By MS/MS By matching 5.88 1.05 4 2 1 1 6 2 40346000 40263000 82961 15553 528 16489 39560;39561;39562;39563;39564;39565;39566;39567 27946;27947 27947 2 1541400 245480 VQVVGTYR ILDDDLVDKAKPGDRVQVVGTYRCLPGKKG KAKPGDRVQVVGTYRCLPGKKGGYTSGTFR R V Q Y R C 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 3 0 0 8 0 920.50797 P25205 P25205 235 242 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.031567 98.582 By MS/MS 4.5 0.5 1 1 2 2737100 2737100 0 15554 683 16490 39568;39569 27948 27948 1 77267 0 VQVYQEPNR LSKKIAERLGVEMGKVQVYQEPNRETRVQI GVEMGKVQVYQEPNRETRVQIQESVRGKDV K V Q N R E 0 1 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 1 2 0 0 9 0 1131.5673 O60256 O60256 49 57 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 2 0.012551 109.48 By MS/MS 7 0 1 1 0 0 0 15555 239 16491 39570 27949 27949 1 0 0 VQYMTGEDPSQALPVIFGK NFSSRQGSVRNLAVRVQYMTGEDPSQALPV TGEDPSQALPVIFGKSSCSEFTREAFTPVV R V Q G K S 1 0 0 1 0 2 1 2 0 1 1 1 1 1 2 1 1 0 1 2 0 0 19 0 2079.0347 Q96HP0 Q96HP0 574 592 DOCK6 Dedicator of cytokinesis protein 6 yes yes 2 0.0079063 76.728 By MS/MS 2 0 1 1 114530 114530 0 15556 2193 16492 39571 27950;27951 27951 1401 2 5692.8 0 VQYPQSQACK QRVKDDIESLHDKFKVQYPQSQACKMSHVR HDKFKVQYPQSQACKMSHVRDLPPVSGSII K V Q C K M 1 0 0 0 1 3 0 0 0 0 0 1 0 0 1 1 0 0 1 1 0 0 10 0 1207.5656 Q14204 Q14204 625 634 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 1.0409E-06 182.39 By MS/MS 2 0.816 1 1 1 3 2506700 2506700 0 15557 1421 16493 39572;39573;39574 27952;27953 27952 2 122640 0 VRAEEREQIK LLTPLNLQIDPTIQRVRAEEREQIKTLNNK PTIQRVRAEEREQIKTLNNKFASFIDKVRF R V R I K T 1 2 0 0 0 1 3 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 2 1256.6837 CON__P02538;P02538;CON__O95678;O95678;CON__P48668;P48668;P04259 CON__P02538 159 168 KRT6A;KRT75;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 3 0.0020664 113.93 By MS/MS By MS/MS 4.6 1.02 1 1 2 1 2 3 1970400 1325200 645230 + 15558 36;53;449 16494 39575;39576;39577;39578;39579 27954;27955;27956 27955 3 41500 1169700 VRDALTAEK LEEVKVLLEKATRKRVRDALTAEKSKIETE KATRKRVRDALTAEKSKIETEIKNKMQQKS R V R E K S 2 1 0 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 1 1001.5506 Q9HB71 Q9HB71 25 33 CACYBP Calcyclin-binding protein yes yes 2 0.03155 117.31 By MS/MS 8.5 0.5 1 1 2 2029500 2029500 0 15559 2549 16495 39580;39581 27957 27957 1 154030 0 VRDIAIATR DALEGVVLSPSLEARVRDIAIATRNTKKNR PSLEARVRDIAIATRNTKKNRSLYRNILMY R V R T R N 2 2 0 1 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 9 1 1013.5982 Q5T9A4;Q9NVI7 Q9NVI7 376 384 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 2 0.0047085 150.27 By MS/MS By matching 6 0.707 1 2 1 3 1 15360000 15333000 27472 15560 2655;1634 16496 39582;39583;39584;39585 27958;27959 27958 2 292740 84254 VREELIDK QDKDTLSIHYLMLPRVREELIDKKTESAVS HYLMLPRVREELIDKKTESAVSQMQSVIEL R V R D K K 0 1 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 1 1000.5553 P41252 P41252 809 816 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.014345 98.582 By MS/MS 3.5 0.5 1 1 2 1006900 1006900 0 15561 840 16497 39586;39587 27960 27960 1 26953 0 VREELIDKK QDKDTLSIHYLMLPRVREELIDKKTESAVS YLMLPRVREELIDKKTESAVSQMQSVIELG R V R K K T 0 1 0 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 2 1128.6503 P41252 P41252 809 817 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.01986 91.636 By MS/MS By matching 3.33 0.471 2 1 2 1 5103900 5082600 21276 15562 840 16498 39588;39589;39590 27961 27961 1 132980 30492 VREEVPLELVEAHVK VASAAAKAALEEFSRVREEVPLELVEAHVK VREEVPLELVEAHVKKVQEAARASGKVDPT R V R V K K 1 1 0 0 0 0 4 0 1 0 2 1 0 0 1 0 0 0 0 4 0 0 15 1 1745.9676 Q92922 Q92922 725 739 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.0009365 115.1 By MS/MS 3 0 1 1 1235500 1235500 0 15563 2090 16499 39591 27962 27962 1 32254 0 VRELISDNQYR DFLDDEEDQGIYQSKVRELISDNQYRLIVN YQSKVRELISDNQYRLIVNVNDLRRKNEKR K V R Y R L 0 2 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 11 1 1391.7157 P25205 P25205 36 46 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.0079557 113.38 By MS/MS 4 0 1 1 1571000 1571000 0 15564 683 16500 39592 27963 27963 1 42887 0 VRELYAAAR SQVVGMGRGLLNYPRVRELYAAARRVLGYD LLNYPRVRELYAAARRVLGYDLLELSLHGP R V R A R R 3 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 9 1 1047.5825 Q8IVS2 Q8IVS2 87 95 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 2 0.0061436 153.08 By MS/MS 7 0 1 1 1034300 1034300 0 15565 1858 16501 39593 27964 27964 1 18483 0 VREYELR VRGAKAEEILEKGLKVREYELRKNNFSDTG EILEKGLKVREYELRKNNFSDTGNFGFGIQ K V R L R K 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 1 963.51378 P62913 P62913 89 95 RPL11 60S ribosomal protein L11 yes yes 3 0.0085173 135.77 By MS/MS 9 0 1 1 636210 636210 0 15566 1161 16502 39594 27965 27965 1 365130 0 VRNATDAVGIVLK KGSPLGEVVEQGITRVRNATDAVGIVLKEL TRVRNATDAVGIVLKELKRQSSLGMFHLLV R V R L K E 2 1 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 3 0 0 13 1 1354.7932 P51398 P51398 233 245 DAP3 28S ribosomal protein S29, mitochondrial yes yes 3 0.0017639 109.6 By MS/MS 7 0 1 1 1438200 1438200 0 15567 963 16503 39595 27966 27966 1 25700 0 VRNLFNVVDCK ARVTLMQLPTRQEIRVRNLFNVVDCKLHWQ QEIRVRNLFNVVDCKLHWQKNGDYLCVKVD R V R C K L 0 1 2 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 3 0 0 11 1 1362.7078 P55884 P55884 506 516 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.047071 101.97 By MS/MS 4 0 1 1 417450 417450 0 15568 1040 16504 39596 27967 27967 1 11396 0 VRPDYTAQNLDHGK WLWQHDEPCYWRLTRVRPDYTAQNLDHGKA RVRPDYTAQNLDHGKAWGILTFKGKTESEA R V R G K A 1 1 1 2 0 1 0 1 1 0 1 1 0 0 1 0 1 0 1 1 0 0 14 1 1612.7958 P82930 P82930 100 113 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 2;3;4 0.00027117 145.09 By MS/MS By matching 8.2 0.4 4 1 4 1 10873000 10830000 43322 15569 1209 16505 39597;39598;39599;39600;39601 27968;27969;27970;27971 27968 4 714420 369590 VRPSTGNSASTPQSQCLPSEIEVK TMALQQKKALSKTSKVRPSTGNSASTPQSQ STPQSQCLPSEIEVKYKMAECYTMLKQDKD K V R V K Y 1 1 1 0 1 2 2 1 0 1 1 1 0 0 3 5 2 0 0 2 0 0 24 1 2571.2599 Q9UJX3 Q9UJX3 116 139 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 3 3.9754E-08 126.55 By MS/MS 5.5 0.5 1 1 2 4651400 4651400 0 15570 2803 16506 39602;39603 27972 27972 1 49780 0 VRQQAADLISR ICGTVLWRLNNKSAKVRQQAADLISRTAVV KSAKVRQQAADLISRTAVVMKTCQEEKLMG K V R S R T 2 2 0 1 0 2 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 1 1255.6997 O75533 O75533 947 957 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.011219 126.71 By MS/MS 3 0 1 1 685750 685750 0 15571 315 16507 39604 27973 27973 1 17902 0 VRQTQVNEATK LGFSLGHLGKSGSGRVRQTQVNEATKARIS GSGRVRQTQVNEATKARISKTLQRTLQKQS R V R T K A 1 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 2 0 0 2 0 0 11 1 1272.6786 Q8WWY3 Q8WWY3 407 417 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 2 0.014596 141.71 By MS/MS By matching 6 0 2 1 1 710580 650520 60059 15572 2043 16508 39605;39606 27974 27974 1 5072.8 184200 VRVDSTAK NTGMDTDKIKIFGSRVRVDSTAKVAEIEHA IKIFGSRVRVDSTAKVAEIEHAEKEKMKEK R V R A K V 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 8 1 874.48723 P78371 P78371 256 263 CCT2 T-complex protein 1 subunit beta yes yes 2 0.038593 136.27 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 137840000 137840000 0 15573 1195 16509 39607;39608;39609;39610;39611;39612;39613;39614 27975 27975 1 1190000 0 VRVEALQSGGGQER GPKGVGAIYIRRRPRVRVEALQSGGGQERG RVRVEALQSGGGQERGMRSGTVPTPLVVGL R V R E R G 1 2 0 0 0 2 2 3 0 0 1 0 0 0 0 1 0 0 0 2 0 0 14 1 1484.7696 Q9Y697 Q9Y697 276 289 NFS1 Cysteine desulfurase, mitochondrial yes yes 2;3 0.0031389 127.02 By MS/MS 6.67 0.471 1 2 3 5434400 5434400 0 15574 2998 16510 39615;39616;39617 27976;27977 27976 2 91802 0 VRYDSSNQVK TGKMLMSKMNKSRQRVRYDSSNQVKGKPDL KSRQRVRYDSSNQVKGKPDLNTALPVRQTA R V R V K G 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 1 2 0 0 10 1 1194.5993 O95983 O95983 81 90 MBD3 Methyl-CpG-binding domain protein 3 yes yes 3 0.053089 63.694 By MS/MS 8 0 1 1 146690 146690 0 15575 416 16511 39618 27978 27978 1 9677 0 VSADNTVGR LSTVLQYAEDVLSGKVSADNTVGRFLMSLV DVLSGKVSADNTVGRFLMSLVNQVPKIVPD K V S G R F 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 2 0 0 9 0 917.45666 O00303 O00303 298 306 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 5.1057E-06 177.3 By MS/MS 6.67 0.471 1 2 3 22031000 22031000 0 15576 88 16512 39619;39620;39621 27979;27980 27980 2 348890 0 VSADSFVR TLVKDMWDTRIAKLRVSADSFVRQQEAHAK TRIAKLRVSADSFVRQQEAHAKLDNLTLME R V S V R Q 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 2 0 0 8 0 879.44503 Q9Y248 Q9Y248 130 137 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 0.0032576 148.04 By MS/MS 9 0 1 1 442240 442240 0 15577 2867 16513 39622 27981 27981 1 253810 0 VSAGNENACLTTK PVVVCREKQSGLLCKVSAGNENACLTTKHL CKVSAGNENACLTTKHLTALGKLEPKLVPL K V S T K H 2 0 2 0 1 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 13 0 1363.6402 Q5VYS8 Q5VYS8 409 421 ZCCHC6 Terminal uridylyltransferase 7 yes yes 2 6.234E-06 174.57 By MS/MS 2.5 0.5 1 1 2 521090 521090 0 15578 1658 16514 39623;39624 27982 27982 1 21957 0 VSALDLAVLDQVEAR QGACLMETVELLQAKVSALDLAVLDQVEAR VSALDLAVLDQVEARLQSVLGKVNEIAKHK K V S A R L 3 1 0 2 0 1 1 0 0 0 3 0 0 0 0 1 0 0 0 3 0 0 15 0 1597.8675 Q13561 Q13561 268 282 DCTN2 Dynactin subunit 2 yes yes 2;3 2.8621E-06 153.14 By MS/MS 6.5 0.5 1 1 2 1742900 1742900 0 15579 1382 16515 39625;39626 27983;27984 27983 2 14550 0 VSALNVLR KIRLQVAGEITTGPRVSALNVLRDLGIFGL EITTGPRVSALNVLRDLGIFGLYKGAKACF R V S L R D 1 1 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 8 0 870.5287 O75746 O75746 466 473 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 2 0.0020118 157.33 By MS/MS 6 0.816 1 1 1 3 6692200 6692200 0 15580 327 16516 39627;39628;39629 27985 27985 1 219910 0 VSALSVVR KIRLQVAGEITTGPRVSALSVVRDLGFFGI EITTGPRVSALSVVRDLGFFGIYKGAKACF R V S V R D 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 3 0 0 8 0 829.50215 Q9UJS0 Q9UJS0 468 475 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 4.0015E-05 198.07 By MS/MS 6.33 1.25 1 1 1 3 37941000 37941000 0 15581 2798 16517 39630;39631;39632 27986;27987 27986 2 1528500 0 VSANKGEIGDATPFNDAVNVQK SRMTIGHLIECLQGKVSANKGEIGDATPFN IGDATPFNDAVNVQKISNLLSDYGYHLRGN K V S Q K I 3 0 3 2 0 1 1 2 0 1 0 2 0 1 1 1 1 0 0 3 0 0 22 1 2273.1288 P30876 P30876 989 1010 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 3 1.7108E-05 107.92 By MS/MS 3.5 0.5 1 1 2 3495700 3495700 0 15582 748 16518 39633;39634 27988 27988 1 91627 0 VSANSVYGFTGAQVGK PLRRQVLDGRQLALKVSANSVYGFTGAQVG SANSVYGFTGAQVGKLPCLEISQSVTGFGR K V S G K L 2 0 1 0 0 1 0 3 0 0 0 1 0 1 0 2 1 0 1 3 0 0 16 0 1583.7944 P28340 P28340 695 710 POLD1 DNA polymerase delta catalytic subunit yes yes 2 3.4713E-10 217.91 By MS/MS 3 0 1 1 474440 474440 0 15583 719 16519 39635 27989 27989 1 12385 0 VSAPGVLTAQDR GQEEMEASSSQDQSKVSAPGVLTAQDRVVG QSKVSAPGVLTAQDRVVGKPAQLGTQRSQE K V S D R V 2 1 0 1 0 1 0 1 0 0 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1212.6463 Q9C0C2 Q9C0C2 812 823 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0061016 101.35 By MS/MS 2.5 0.5 1 1 2 540870 540870 0 15584 2433 16520 39636;39637 27990 27990 1 22303 0 VSASPLLYTLIEK YINLDKAVLGTSNFKVSASPLLYTLIEKTM FKVSASPLLYTLIEKTMQNVKHPVTGQFLY K V S E K T 1 0 0 0 0 0 1 0 0 1 3 1 0 0 1 2 1 0 1 1 0 0 13 0 1432.8177 P02786 P02786 496 508 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 2 9.7108E-08 187.31 By MS/MS 5 1.41 1 1 1 1 1 5 2144100 2144100 0 15585 437 16521 39638;39639;39640;39641;39642 27991;27992;27993 27991 3 55312 0 VSCLETVWVSR DSGLHKEERYDLKTKVSCLETVWVSRANVI LKTKVSCLETVWVSRANVIQRRGRAGRCQS K V S S R A 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 0 3 0 0 11 0 1334.6653 Q7L2E3 Q7L2E3 763 773 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 5.9608E-05 167.93 By MS/MS 3.5 0.5 1 1 2 4656600 4656600 0 15586 1763 16522 39643;39644 27994;27995 27994 2 122920 0 VSDGGSSSTDFK VSISPTTKGSKSPAKVSDGGSSSTDFKMVS PAKVSDGGSSSTDFKMVSSGLTENQLQLSV K V S F K M 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 4 1 0 0 1 0 0 12 0 1185.515 Q7Z6Z7 Q7Z6Z7 3559 3570 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00025333 150.15 By MS/MS 2 0.816 1 1 1 3 566870 566870 0 15587 1803 16523 39645;39646;39647 27996;27997 27996 2 25350 0 VSDSLTDLALK LNVTQASLSAQVNTKVSDSLTDLALK____ VNTKVSDSLTDLALK_______________ K V S L K - 1 0 0 2 0 0 0 0 0 0 3 1 0 0 0 2 1 0 0 1 0 0 11 0 1160.6289 Q8N3C0 Q8N3C0 2192 2202 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.00030165 150.81 By MS/MS 1.5 0.5 1 1 2 434240 434240 0 15588 1908 16524 39648;39649 27998 27998 1 21322 0 VSEAEFLAR GQTQIPNPLLKDILRVSEAEFLARTACTSV LKDILRVSEAEFLARTACTSVEEFQVFKKL R V S A R T 2 1 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 9 0 1020.524 Q7Z6M4 Q7Z6M4 296 304 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes yes 2 5.7155E-08 200.16 By MS/MS 7 0 1 1 2374100 2374100 0 15589 1802 16525 39650 27999 27999 1 42425 0 VSEALGQGTR GKAIGKEAGGAAGSKVSEALGQGTREAVGT AAGSKVSEALGQGTREAVGTGVRQVPGFGA K V S T R E 1 1 0 0 0 1 1 2 0 0 1 0 0 0 0 1 1 0 0 1 0 0 10 0 1016.5251 CON__A3EZ79;CON__A3EZ82;Q6E0U4 CON__A3EZ79 67 76 DMKN Dermokine yes no 2 0.0056289 105.4 By MS/MS 6.5 0.5 1 1 2 52108000 52108000 0 + 15590 29 16526 39651;39652 28000 28000 1 427280 0 VSEAYENLVK EKVARLQKVETEIQRVSEAYENLVKSSSKR TEIQRVSEAYENLVKSSSKREALEKAMRNK R V S V K S 1 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 10 0 1150.587 Q4VCS5 Q4VCS5 472 481 AMOT Angiomotin yes yes 2 0.00013862 161.27 By MS/MS 4 0.816 1 1 1 3 1471700 1471700 0 15591 1580 16527 39653;39654;39655 28001 28001 1 47655 0 VSEEGPAAR STPYKGDDEGIFISRVSEEGPAARAGVRVG GIFISRVSEEGPAARAGVRVGDKLLEVNGV R V S A R A 2 1 0 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 9 0 914.44576 Q14160 Q14160 763 771 SCRIB Protein scribble homolog yes yes 2 0.010364 110.12 By MS/MS 2 0 1 1 216440 216440 0 15592 1412 16528 39656 28002 28002 1 10758 0 VSEEIFFGR KEQLLDRMCMTLGGRVSEEIFFGRITTGAQ MTLGGRVSEEIFFGRITTGAQDDLRKVTQS R V S G R I 0 1 0 0 0 0 2 1 0 1 0 0 0 2 0 1 0 0 0 1 0 0 9 0 1082.5397 Q9Y4W6 Q9Y4W6 633 641 AFG3L2 AFG3-like protein 2 yes yes 2 0.00030745 157.68 By MS/MS 6 1.41 1 1 1 1 1 5 4889800 4889800 0 15593 2960 16529 39657;39658;39659;39660;39661 28003;28004 28003 2 152880 0 VSEKEKESIAR DFSAALNNFQAVQRRVSEKEKESIARARAG VQRRVSEKEKESIARARAGSRLSAEERQRE R V S A R A 1 1 0 0 0 0 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 11 2 1274.683 Q86Y82 Q86Y82 124 134 STX12 Syntaxin-12 yes yes 3 0.0484 71.221 By MS/MS 7.5 0.5 1 1 2 726790 726790 0 15594 1846 16530 39662;39663 28005 28005 1 25391 0 VSEQGLIEILK NYLIQMARYGQLSEKVSEQGLIEILKKVSQ LSEKVSEQGLIEILKKVSQQTEKTTTVKFN K V S L K K 0 0 0 0 0 1 2 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1227.7075 O14737 O14737 87 97 PDCD5 Programmed cell death protein 5 yes yes 2 8.4078E-08 194.12 By MS/MS 10 0 1 1 625780 625780 0 15595 124 16531 39664 28006 28006 1 665130 0 VSFELFADK TVFFDIAVDGEPLGRVSFELFADKVPKTAE GEPLGRVSFELFADKVPKTAENFRALSTGE R V S D K V 1 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 9 0 1054.5335 P62937 P62937 20 28 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.00081708 146.23 By MS/MS 10 0 1 1 320820 320820 0 15596 1163 16532 39665 28007 28007 1 341000 0 VSFELFADKVPK TVFFDIAVDGEPLGRVSFELFADKVPKTAE LGRVSFELFADKVPKTAENFRALSTGEKGF R V S P K T 1 0 0 1 0 0 1 0 0 0 1 2 0 2 1 1 0 0 0 2 0 0 12 1 1378.7497 P62937 P62937 20 31 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2;3 1.4853E-05 176.48 By MS/MS 10 0 2 2 2174800 2174800 0 15597 1163 16533 39666;39667 28008;28009 28009 2 2311600 0 VSGGPSLEQR LILYKELYYRHIYAKVSGGPSLEQRFESYY HIYAKVSGGPSLEQRFESYYNYCNLFNYIL K V S Q R F 0 1 0 0 0 1 1 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1028.5251 Q9Y262 Q9Y262 144 153 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.00099784 122.96 By MS/MS By MS/MS 5 2.24 1 1 2 2 1 1 6 2 11712000 11492000 219600 15598 2868 16534 39668;39669;39670;39671;39672;39673;39674;39675 28010;28011;28012;28013 28010 4 471480 670440 VSGHVITDIVEGK QGGTSVVIANGTHPKVSGHVITDIVEGKKV PKVSGHVITDIVEGKKVGTFFSEVKPAGPT K V S G K K 0 0 0 1 0 0 1 2 1 2 0 1 0 0 0 1 1 0 0 3 0 0 13 0 1352.73 P54886 P54886 335 347 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2;3 0.00013879 145.83 By MS/MS 5.33 0.471 2 1 3 30014000 30014000 0 15599 1019 16535 39676;39677;39678 28014;28015;28016 28014 3 1233700 0 VSGHVITDIVEGKK QGGTSVVIANGTHPKVSGHVITDIVEGKKV KVSGHVITDIVEGKKVGTFFSEVKPAGPTV K V S K K V 0 0 0 1 0 0 1 2 1 2 0 2 0 0 0 1 1 0 0 3 0 0 14 1 1480.8249 P54886 P54886 335 348 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 3;4 2.0728E-08 199.31 By MS/MS 5.5 0.957 1 2 2 1 6 14430000 14430000 0 15600 1019 16536 39679;39680;39681;39682;39683;39684 28017;28018;28019 28017 3 370940 0 VSGISFPTTELLR SSLWRSSGAPETLQRVSGISFPTTELLRVW QRVSGISFPTTELLRVWEAWREEAELRDHR R V S L R V 0 1 0 0 0 0 1 1 0 1 2 0 0 1 1 2 2 0 0 1 0 0 13 0 1418.7769 Q9BW92 Q9BW92 276 288 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 9.0092E-13 213.35 By MS/MS 5.5 1.12 1 1 1 1 4 15053000 15053000 0 15601 2391 16537 39685;39686;39687;39688 28020;28021 28021 2 300980 0 VSGQVQALQNHYR LSARTFSRHVVQRQRVSGQVQALQNHYRKY QRVSGQVQALQNHYRKYLCLLASDAEVPEP R V S Y R K 1 1 1 0 0 3 0 1 1 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1498.7641 O00411 O00411 519 531 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.0040742 108.47 By MS/MS 3 0 1 1 630010 630010 0 15602 92 16538 39689 28022 28022 1 16446 0 VSGSELVQK LARAVAHHTDCTFIRVSGSELVQKFIGEGA DCTFIRVSGSELVQKFIGEGARMVRELFVM R V S Q K F 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 9 0 945.51311 P62195 P62195 214 222 PSMC5 26S protease regulatory subunit 8 yes yes 2 0.0051365 127.68 By MS/MS 7 0 1 1 0 0 0 15603 1117 16539 39690 28023 28023 1 0 0 VSGSQIVDIDK IRAKYPDRVPVIVEKVSGSQIVDIDKRKYL IVEKVSGSQIVDIDKRKYLVPSDITVAQFM K V S D K R 0 0 0 2 0 1 0 1 0 2 0 1 0 0 0 2 0 0 0 2 0 0 11 0 1159.6085 P60520 P60520 36 46 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 2 2.4944E-11 211.64 By MS/MS 10 0 1 1 536750 536750 0 15604 1068 16540 39691 28024 28024 1 570510 0 VSGSQIVDIDKR IRAKYPDRVPVIVEKVSGSQIVDIDKRKYL VEKVSGSQIVDIDKRKYLVPSDITVAQFMW K V S K R K 0 1 0 2 0 1 0 1 0 2 0 1 0 0 0 2 0 0 0 2 0 0 12 1 1315.7096 P60520 P60520 36 47 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 2 1.8178E-06 181.66 By MS/MS 10 0 1 1 288960 288960 0 15605 1068 16541 39692 28025 28025 1 307130 0 VSGVDGYETEGIR SKLSTPGARAETNSRVSGVDGYETEGIRGL SRVSGVDGYETEGIRGLRALGVRDLSYRLV R V S I R G 0 1 0 1 0 0 2 3 0 1 0 0 0 0 0 1 1 0 1 2 0 0 13 0 1380.6521 Q14566 Q14566 270 282 MCM6 DNA replication licensing factor MCM6 yes yes 2 1.8376E-25 243.91 By MS/MS 4.8 0.748 2 2 1 5 8298200 8298200 0 15606 1436 16542 39693;39694;39695;39696;39697 28026;28027;28028 28027 3 224440 0 VSHELGPSLR ITQPRRISAVSVAQRVSHELGPSLRRNVGF SVAQRVSHELGPSLRRNVGFQVRLESKPPS R V S L R R 0 1 0 0 0 0 1 1 1 0 2 0 0 0 1 2 0 0 0 1 0 0 10 0 1093.588 Q7L2E3 Q7L2E3 503 512 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2;3 0.012058 107.15 By MS/MS 3.5 0.5 2 2 4 2273300 2273300 0 15607 1763 16543 39698;39699;39700;39701 28029;28030 28029 2 60097 0 VSHELGPSLRR ITQPRRISAVSVAQRVSHELGPSLRRNVGF VAQRVSHELGPSLRRNVGFQVRLESKPPSR R V S R R N 0 2 0 0 0 0 1 1 1 0 2 0 0 0 1 2 0 0 0 1 0 0 11 1 1249.6891 Q7L2E3 Q7L2E3 503 513 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 3 0.040948 72.325 By MS/MS By matching 3.75 0.829 2 1 1 3 1 2283100 2263400 19668 15608 1763 16544 39702;39703;39704;39705 28031 28031 1 63235 28188 VSHLLQDNLPK LKNFQDIMQKQRPERVSHLLQDNLPKSVST RPERVSHLLQDNLPKSVSTFQYDRFFEKKI R V S P K S 0 0 1 1 0 1 0 0 1 0 3 1 0 0 1 1 0 0 0 1 0 0 11 0 1262.6983 P13196 P13196 182 192 ALAS1 5-aminolevulinate synthase, nonspecific, mitochondrial yes yes 2 0.018267 90.913 By MS/MS 5.5 0.5 1 1 2 930540 930540 0 15609 572 16545 39706;39707 28032 28032 1 24366 0 VSIKESSVAK GAACLLNSNKYFPSRVSIKESSVAKLGSVC YFPSRVSIKESSVAKLGSVCRRIYRIFSHA R V S A K L 1 0 0 0 0 0 1 0 0 1 0 2 0 0 0 3 0 0 0 2 0 0 10 1 1046.5972 Q9Y3A3 Q9Y3A3 146 155 MOB4 MOB-like protein phocein yes yes 2 0.0037313 144.77 By MS/MS 9 0 1 1 316780 316780 0 15610 2921 16546 39708 28033 28033 1 181800 0 VSILESLDKWER STLRKRKMYEEFLSKVSILESLDKWERLTV LSKVSILESLDKWERLTVADALEPVQFEDG K V S E R L 0 1 0 1 0 0 2 0 0 1 2 1 0 0 0 2 0 1 0 1 0 0 12 1 1473.7827 P10644 P10644 253 264 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 2;3 0.00052254 164.65 By MS/MS 6 0 2 2 10836000 10836000 0 15611 542 16547 39709;39710 28034;28035 28035 2 84498 0 VSILPDVVFDSPLH FKLPKEYSWPEKKLKVSILPDVVFDSPLH_ KVSILPDVVFDSPLH_______________ K V S L H - 0 0 0 2 0 0 0 0 1 1 2 0 0 1 2 2 0 0 0 3 0 0 14 0 1536.8188 Q9UMX1 Q9UMX1 471 484 SUFU Suppressor of fused homolog yes yes 2 8.0175E-05 150.61 By MS/MS 6 0 1 1 379620 379620 0 15612 2835 16548 39711 28036 28036 1 2960.3 0 VSKPTDSKAER PDSVPPEELKPYHIRVSKPTDSKAERAH__ YHIRVSKPTDSKAERAH_____________ R V S E R A 1 1 0 1 0 0 1 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 11 2 1216.6412 Q6PI48 Q6PI48 633 643 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 2;3 0.0032241 147.28 By MS/MS 6.29 1.03 2 2 2 1 7 2506300 2506300 0 15613 1715 16549 39712;39713;39714;39715;39716;39717;39718 28037;28038 28038 2 94483 0 VSLAGACGVGGYGSR SVSRSGGGGGGGFGRVSLAGACGVGGYGSR VSLAGACGVGGYGSRSLYNLGGSKRISIST R V S S R S 2 1 0 0 1 0 0 5 0 0 1 0 0 0 0 2 0 0 1 2 0 0 15 0 1409.6721 CON__P13647;P13647 CON__P13647 49 63 KRT5 Keratin, type II cytoskeletal 5 yes no 2 2.3878E-28 234.79 By MS/MS By MS/MS 4.46 2.44 2 1 2 2 2 1 1 1 1 6 7 12665000 10371000 2294500 + 15614 50 16550 39719;39720;39721;39722;39723;39724;39725;39726;39727;39728;39729;39730;39731 28039;28040;28041;28042;28043;28044;28045;28046;28047;28048;28049 28045 11 611790 5353500 VSLEDLYNGK RNGRRRGEDMMHPLKVSLEDLYNGKTTKLQ MHPLKVSLEDLYNGKTTKLQLSKNVLCSAC K V S G K T 0 0 1 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 10 0 1136.5714 O60884 O60884 122 131 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 2.1913E-08 195.32 By MS/MS 7 0 1 1 6217800 6217800 0 15615 273 16551 39732 28050 28050 1 111110 0 VSLEEIYSGCTK PARKKQDPPVTHDLRVSLEEIYSGCTKKMK DLRVSLEEIYSGCTKKMKISHKRLNPDGKS R V S T K K 0 0 0 0 1 0 2 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 12 0 1384.6544 P25685;Q9UDY4 P25685 170 181 DNAJB1;DNAJB4 DnaJ homolog subfamily B member 1;DnaJ homolog subfamily B member 4 yes no 2 0.0001445 155.26 By MS/MS 7.5 0.5 1 1 2 2426700 2426700 0 15616 686 16552 39733;39734 28051 28051 1 56420 0 VSLLSEQK MTYSVQFGDLWPSIRVSLLSEQKYGALVNN DLWPSIRVSLLSEQKYGALVNNFAAWDHVS R V S Q K Y 0 0 0 0 0 1 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 8 0 902.5073 Q96CB9 Q96CB9 65 72 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 yes yes 2 0.031446 98.629 By MS/MS 7 0 1 1 3111700 3111700 0 15617 2137 16553 39735 28052 28052 1 55607 0 VSLVGADDLR ELEVRVPQAEGPPKRVSLVGADDLRKMQEE GPPKRVSLVGADDLRKMQEEEARKLQQKRA R V S L R K 1 1 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 10 0 1043.5611 Q14160 Q14160 1377 1386 SCRIB Protein scribble homolog yes yes 2 0.033811 82.749 By MS/MS 2 0 1 1 312880 312880 0 15618 1412 16554 39736 28053 28053 1 15552 0 VSNRFSGVPDR LQQRPGQPPRLLIYKVSNRFSGVPDRFSGS LIYKVSNRFSGVPDRFSGSGAGTDFTLKIS K V S D R F 0 2 1 1 0 0 0 1 0 0 0 0 0 1 1 2 0 0 0 2 0 0 11 1 1232.6262 A0A075B6R9 A0A075B6R9 76 86 IGKV2D-24 yes yes 3 0.001803 117.79 By MS/MS 9 0 1 1 3508400 3508400 0 15619 1 16555 39737 28054 28054 1 2013500 0 VSNSGITR IDDCELVEGLVLTQKVSNSGITRVEKAKIG GLVLTQKVSNSGITRVEKAKIGLIQFCLSA K V S T R V 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 2 1 0 0 1 0 0 8 0 832.44028 P50991 P50991 233 240 CCT4 T-complex protein 1 subunit delta yes yes 2 0.00057932 181.41 By MS/MS By MS/MS 7 1.31 1 2 1 2 1 6 1 87461000 87330000 131530 15620 956 16556 39738;39739;39740;39741;39742;39743;39744 28055;28056;28057;28058 28056 4 1005800 403380 VSNSGITRVEK IDDCELVEGLVLTQKVSNSGITRVEKAKIG LTQKVSNSGITRVEKAKIGLIQFCLSAPKT K V S E K A 0 1 1 0 0 0 1 1 0 1 0 1 0 0 0 2 1 0 0 2 0 0 11 1 1188.6463 P50991 P50991 233 243 CCT4 T-complex protein 1 subunit delta yes yes 2 4.9222E-06 183.85 By MS/MS By matching 6.75 0.829 2 1 1 3 1 40204000 40188000 15883 15621 956 16557 39745;39746;39747;39748 28059;28060;28061 28059 3 375880 48713 VSNTLESR IAGGVEIYNGDRKIKVSNTLESRLDLIAQQ NGDRKIKVSNTLESRLDLIAQQMMPEVRGA K V S S R L 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 8 0 904.46141 P36543;Q96A05 P36543 192 199 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 2 0.0042767 151.44 By MS/MS By matching 8 0 2 1 1 659440 636190 23250 15622 806 16558 39749;39750 28062 28062 1 41969 198350 VSNVDHNKR RQMQVLETCVATVGRVSNVDHNKRVIGKAG VATVGRVSNVDHNKRVIGKAGRNRWLGKRP R V S K R V 0 1 2 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 9 1 1067.5472 Q5T653 Q5T653 247 255 MRPL2 39S ribosomal protein L2, mitochondrial yes yes 2 0.00026951 172.59 By MS/MS 8.5 0.5 1 1 2 342020 342020 0 15623 1629 16559 39751;39752 28063 28063 1 26595 0 VSPDMAIFITMNPGYAGR TSAPITCELLNKQVKVSPDMAIFITMNPGY DMAIFITMNPGYAGRSNLPDNLKKLFRSLA K V S G R S 2 1 1 1 0 0 0 2 0 2 0 0 2 1 2 1 1 0 1 1 0 0 18 0 1938.9332 Q14204 Q14204 2008 2025 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.043016 44.829 By MS/MS 1.5 0.5 1 1 2 500170 500170 0 15624 1421 16560 39753;39754 28064 28064 1 24594 0 VSPIQIDGAGR CLSHHVADAYTSSQKVSPIQIDGAGRTWQD SSQKVSPIQIDGAGRTWQDSDTVKLLVDLE K V S G R T 1 1 0 1 0 1 0 2 0 2 0 0 0 0 1 1 0 0 0 1 0 0 11 0 1111.5986 Q8NFQ8 Q8NFQ8 325 335 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 2 0.0017456 123.67 By MS/MS 5 0 1 1 783090 783090 0 15625 1973 16561 39755 28065 28065 1 32188 0 VSPSTSYTPSR STWVKEAYVNANQARVSPSTSYTPSRHKRS NQARVSPSTSYTPSRHKRSYEDDDDMDLQP R V S S R H 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 1 1 0 0 11 0 1180.5724 Q9BTE3 Q9BTE3 153 163 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 2 0.05402 75.652 By MS/MS 5 0 1 1 788020 788020 0 15626 2349 16562 39756 28066 28066 1 32391 0 VSQGSKDPAEGDGAQPEETPR NARGLLEFEHQRAPRVSQGSKDPAEGDGAQ DPAEGDGAQPEETPRDGDKPEETQGKAEKD R V S P R D 2 1 0 2 0 2 3 3 0 0 0 1 0 0 3 2 1 0 0 1 0 0 21 1 2153.9825 Q14697 Q14697 186 206 GANAB Neutral alpha-glucosidase AB yes yes 3 8.4938E-06 126.51 By MS/MS 4 0 1 1 735710 735710 0 15627 1443 16563 39757 28067 28067 1 20084 0 VSQLLAVTGK FEDRDRSHREEMEVRVSQLLAVTGKKTTRP EMEVRVSQLLAVTGKKTTRP__________ R V S G K K 1 0 0 0 0 1 0 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 10 0 1014.6073 Q13951 Q13951 168 177 CBFB Core-binding factor subunit beta yes yes 2 4.1341E-05 172.27 By MS/MS 9 0 1 1 831910 831910 0 15628 1404 16564 39758 28068 28068 1 477440 0 VSQMAQYFEPLTLAAVGAASK LANAARAEASQLGHKVSQMAQYFEPLTLAA YFEPLTLAAVGAASKTLSHPQQMALLDQTK K V S S K T 5 0 0 0 0 2 1 1 0 0 2 1 1 1 1 2 1 0 1 2 0 0 21 0 2181.114 Q9Y490 Q9Y490 1731 1751 TLN1 Talin-1 yes yes 2 0.0061011 72.446 By MS/MS 2.5 0.5 1 1 2 179640 179640 0 15629 2947 16565 39759;39760 28069;28070 28069 1701 2 7680.9 0 VSQNSQLANEK NEVSTLKDQLEDLKKVSQNSQLANEKLSQL DLKKVSQNSQLANEKLSQLQKQLEEANDLL K V S E K L 1 0 2 0 0 2 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1216.6048 Q13464 Q13464 529 539 ROCK1 Rho-associated protein kinase 1 yes yes 2 3.6491E-07 189.17 By MS/MS 3 0 1 1 90387 90387 0 15630 1373 16566 39761 28071 28071 1 2359.6 0 VSQQILEK LDKYAPENLDEQIKKVSQQILEKRAYICAH LDEQIKKVSQQILEKRAYICAHPLDRTC__ K V S E K R 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 8 0 943.53385 Q9H845 Q9H845 601 608 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 2 0.0080529 126.24 By MS/MS 6 0 1 1 1734700 1734700 0 15631 2521 16567 39762 28072 28072 1 13527 0 VSQWWER YKLTQRQVNITVQKKVSQWWERLTKQEKRP VNITVQKKVSQWWERLTKQEKRPLFLAPDF K V S E R L 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 2 0 1 0 0 7 0 989.47191 Q9P035 Q9P035 86 92 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 2 0.0063954 172.15 By MS/MS 2.5 1.12 1 1 1 1 4 2535900 2535900 0 15632 2723 16568 39763;39764;39765;39766 28073 28073 1 112290 0 VSSASSTAER ALPTSKSTTRLDSDRVSSASSTAERGMVKP LDSDRVSSASSTAERGMVKPMIRVEQQPDY R V S E R G 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 4 1 0 0 1 0 0 10 0 993.4727 P55196 P55196 560 569 MLLT4 Afadin yes yes 2 0.000694 137.05 By MS/MS 2 0 1 1 105500 105500 0 15633 1029 16569 39767 28074 28074 1 5244 0 VSSDEDLKLTELLR KVAELFEKLRKVEGRVSSDEDLKLTELLRY RVSSDEDLKLTELLRYYMLNIEAAKDLLYR R V S L R Y 0 1 0 2 0 0 2 0 0 0 4 1 0 0 0 2 1 0 0 1 0 0 14 1 1616.8621 Q9Y5X3 Q9Y5X3 283 296 SNX5 Sorting nexin-5 yes yes 3 0.01907 72.891 By MS/MS 6.5 0.5 1 1 2 1151100 1151100 0 15634 2985 16570 39768;39769 28075 28075 1 13065 0 VSSDNVADLHEK GAVNLYHVREDGWIRVSSDNVADLHEKYSG WIRVSSDNVADLHEKYSGSTP_________ R V S E K Y 1 0 1 2 0 0 1 0 1 0 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1312.6259 P28074 P28074 246 257 PSMB5 Proteasome subunit beta type-5 yes yes 2 5.2779E-07 179.94 By MS/MS 8.5 0.5 1 1 2 2441900 2441900 0 15635 715 16571 39770;39771 28076 28076 1 1156500 0 VSSDNVADLHEKYSGSTP GAVNLYHVREDGWIRVSSDNVADLHEKYSG DNVADLHEKYSGSTP_______________ R V S T P - 1 0 1 2 0 0 1 1 1 0 1 1 0 0 1 4 1 0 1 2 0 0 18 1 1904.8752 P28074 P28074 246 263 PSMB5 Proteasome subunit beta type-5 yes yes 2 1.0138E-09 161.21 By MS/MS 9 0 1 1 778480 778480 0 15636 715 16572 39772 28077 28077 1 446770 0 VSSDVIDQK SDLIDQKVYELQASRVSSDVIDQKVYEIQD ELQASRVSSDVIDQKVYEIQDIYENSWTKL R V S Q K V 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 2 0 0 0 2 0 0 9 0 989.50294 Q9Y262 Q9Y262 79 87 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 4.3346E-07 194.29 By MS/MS By MS/MS 5.25 2.54 1 1 2 2 1 1 6 2 23510000 23160000 350520 15637 2868 16573 39773;39774;39775;39776;39777;39778;39779;39780 28078;28079;28080;28081;28082;28083;28084 28083 7 615980 1069200 VSSGYVPPPVATPFSSK SLLDDMTKNDPFKARVSSGYVPPPVATPFS SGYVPPPVATPFSSKSSTKPAAGGTAPLPP R V S S K S 1 0 0 0 0 0 0 1 0 0 0 1 0 1 4 4 1 0 1 3 0 0 17 0 1718.8879 Q15942 Q15942 168 184 ZYX Zyxin yes yes 2 0.002826 112.5 By MS/MS 5 0 1 1 1890800 1890800 0 15638 1528 16574 39781 28085 28085 1 77719 0 VSSLQAEPLPR LQTLLHSKGNTQTSKVSSLQAEPLPRLSVK QTSKVSSLQAEPLPRLSVKKLLEGGKGGIA K V S P R L 1 1 0 0 0 1 1 0 0 0 2 0 0 0 2 2 0 0 0 1 0 0 11 0 1195.6561 Q9H2M9 Q9H2M9 914 924 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 1.3597E-10 199.33 By MS/MS 3.5 0.5 1 1 2 3836200 3836200 0 15639 2481 16575 39782;39783 28086 28086 1 100670 0 VSSQNLVAIPVYVK SFIPPDGNFRLISYRVSSQNLVAIPVYVKH RVSSQNLVAIPVYVKHSISFKENSSCGRFD R V S V K H 1 0 1 0 0 1 0 0 0 1 1 1 0 0 1 2 0 0 1 4 0 0 14 0 1515.8661 Q9Y2T2 Q9Y2T2 264 277 AP3M1 AP-3 complex subunit mu-1 yes yes 2 0.024616 105.13 By MS/MS 6.5 0.5 1 1 2 1036200 1036200 0 15640 2901 16576 39784;39785 28087 28087 1 15035 0 VSSTATTQDVIETLAEK FQDKAAGNFATKCIRVSSTATTQDVIETLA STATTQDVIETLAEKFRPDMRMLSSPKYSL R V S E K F 2 0 0 1 0 1 2 0 0 1 1 1 0 0 0 2 4 0 0 2 0 0 17 0 1791.9102 P55196 P55196 62 78 MLLT4 Afadin yes yes 2 2.9269E-10 158.11 By MS/MS 3 0.816 1 1 1 3 610060 610060 0 15641 1029 16577 39786;39787;39788 28088;28089 28088 2 21943 0 VSSVFKDEATVR TDTSDPEKVVSAFLKVSSVFKDEATVRMAV FLKVSSVFKDEATVRMAVQDAVDALMQKAF K V S V R M 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 2 1 0 0 3 0 0 12 1 1336.6987 P46060 P46060 476 487 RANGAP1 Ran GTPase-activating protein 1 yes yes 2;3 0.00094946 156.01 By MS/MS 5.5 0.5 2 2 4 15615000 15615000 0 15642 876 16578 39789;39790;39791;39792 28090;28091 28090 2 445530 0 VSTAVLSITAK YPAPLEVPKEKEKEKVSTAVLSITAKAKKK EKEKVSTAVLSITAKAKKKEKEKEKKEEEK K V S A K A 2 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2 2 0 0 2 0 0 11 0 1088.6441 Q99460 Q99460 828 838 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 2 0.00071536 137.46 By MS/MS By matching 4 0 2 1 1 3488600 3406200 82380 15643 2268 16579 39793;39794 28092 28092 1 92985 172140 VSTDLLR ETTDIISRHLPGVCKVSTDLLREGAPIEPD RHLPGVCKVSTDLLREGAPIEPDPPVSHWK K V S L R E 0 1 0 1 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 7 0 802.45487 Q96HS1 Q96HS1 170 176 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes yes 2 0.042356 106.42 By MS/MS By matching 8.33 0.471 2 1 2 1 18762000 18708000 54777 15644 2196 16580 39795;39796;39797 28093 28093 1 1830600 467310 VSTVFWK KKPPKPQLMANYYNKVSTVFWKSGNALFHA LMANYYNKVSTVFWKSGNALFHASTLHRLY K V S W K S 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 1 0 2 0 0 7 0 865.46979 Q14152 Q14152 279 285 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.017424 133.47 By MS/MS 3.5 1.12 1 1 1 1 4 9766700 9766700 0 15645 1409 16581 39798;39799;39800;39801 28094;28095 28094 2 261510 0 VSVFFGGLSIK SKEYERFSKYMPSVKVSVFFGGLSIKKDEE PSVKVSVFFGGLSIKKDEEVLKKNCPHVVV K V S I K K 0 0 0 0 0 0 0 2 0 1 1 1 0 2 0 2 0 0 0 2 0 0 11 0 1152.6543 O00148 O00148 144 154 DDX39A ATP-dependent RNA helicase DDX39A yes yes 2 0.0012419 130.41 By MS/MS 6 0 1 1 1220400 1220400 0 15646 70 16582 39802 28096 28096 1 9516.8 0 VSVHVIEGDHR DLGADYNLSQVCDGKVSVHVIEGDHRTLLE CDGKVSVHVIEGDHRTLLEGSGLESIISII K V S H R T 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 1 0 0 0 3 0 0 11 0 1246.6418 P49327 P49327 2472 2482 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.0092346 103.08 By MS/MS 2 0.816 1 1 1 3 2974600 2974600 0 15647 915 16583 39803;39804;39805 28097;28098 28097 2 118380 0 VSVLFDR PAAPDSESVIVAMERVSVLFDRIRKGFPCE SVIVAMERVSVLFDRIRKGFPCEARVVARI R V S D R I 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 2 0 0 7 0 834.45995 P42858 P42858 2958 2964 HTT Huntingtin yes yes 2 0.038599 109.01 By MS/MS 1.5 0.5 1 1 2 432000 432000 0 15648 858 16584 39806;39807 28099 28099 1 21182 0 VSVLTGIIK FSERIDVFSPVEFNKVSVLTGIIKISLKTL PVEFNKVSVLTGIIKISLKTLLECVRLRTF K V S I K I 0 0 0 0 0 0 0 1 0 2 1 1 0 0 0 1 1 0 0 2 0 0 9 0 928.59572 Q9UID3 Q9UID3 697 705 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 2 0.026353 93.143 By MS/MS 5 0 1 1 440240 440240 0 15649 2791 16585 39808 28100 28100 1 18095 0 VSVNDFIIK AVLKVRQDLVKDDIKVSVNDFIIKAAAVTL VKDDIKVSVNDFIIKAAAVTLKQMPDVNVS K V S I K A 0 0 1 1 0 0 0 0 0 2 0 1 0 1 0 1 0 0 0 2 0 0 9 0 1033.5808 O00330 O00330 326 334 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 2 0.039237 85.862 By MS/MS 6 0 1 1 1078800 1078800 0 15650 89 16586 39809 28101 28101 1 8412.4 0 VSVPLLK GTLLQIFEDNLLNERVSVPLLKTLDHVLTH EDNLLNERVSVPLLKTLDHVLTHGCFDIFT R V S L K T 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 2 0 0 7 0 754.49528 Q9BTW9 Q9BTW9 1039 1045 TBCD Tubulin-specific chaperone D yes yes 2 0.053606 100.27 By MS/MS 6 0 1 1 909040 909040 0 15651 2354 16587 39810 28102 28102 1 7088.7 0 VSVTTNTTDSVSDEEK LVQLPLSGNREYSARVSVTTNTTDSVSDEE SVTTNTTDSVSDEEKVSGGKDGNGSSTSVQ R V S E K V 0 0 1 2 0 0 2 0 0 0 0 1 0 0 0 3 4 0 0 3 0 0 16 0 1710.7796 Q9NR09 Q9NR09 2944 2959 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 2 5.706E-39 265.77 By MS/MS 1.5 0.5 1 1 2 795480 795480 0 15652 2596 16588 39811;39812 28103;28104 28103 2 39076 0 VSVVPDEVATIAAEVTSFSNR FLCRTLRSLGVQVCRVSVVPDEVATIAAEV EVATIAAEVTSFSNRFTHVLTAGGIGPTHD R V S N R F 3 1 1 1 0 0 2 0 0 1 0 0 0 1 1 3 2 0 0 5 0 0 21 0 2190.1168 Q8NFF5 Q8NFF5 149 169 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes yes 2 0.0005122 102.29 By MS/MS 6 0 1 1 180030 180030 0 15653 1969 16589 39813 28105 28105 1 1403.9 0 VSWLGEEPVAGVWSEK ELAMVPHYGGINRVRVSWLGEEPVAGVWSE SWLGEEPVAGVWSEKGQVEVFALRRLLQVV R V S E K G 1 0 0 0 0 0 3 2 0 0 1 1 0 0 1 2 0 2 0 3 0 0 16 0 1771.8781 Q9BQ67 Q9BQ67 157 172 GRWD1 Glutamate-rich WD repeat-containing protein 1 yes yes 2 2.5895E-10 186.76 By MS/MS 6.5 0.5 1 1 2 3093100 3093100 0 15654 2307 16590 39814;39815 28106 28106 1 24867 0 VSYASLADVDK TYDTINPTDGSTICKVSYASLADVDKAVAA TICKVSYASLADVDKAVAAAKDAFENGEWG K V S D K A 2 0 0 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 1 2 0 0 11 0 1166.5819 Q3SY69 Q3SY69 474 484 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.01085 97.597 By MS/MS 4 0 1 1 1126800 1126800 0 15655 1570 16591 39816 28107 28107 1 30760 0 VSYASLADVDKAVAAAK TYDTINPTDGSTICKVSYASLADVDKAVAA YASLADVDKAVAAAKDAFENGEWGRMNARE K V S A K D 6 0 0 2 0 0 0 0 0 0 1 2 0 0 0 2 0 0 1 3 0 0 17 1 1677.8938 Q3SY69 Q3SY69 474 490 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 3 0.028198 62.104 By MS/MS 4 0 1 1 1326100 1326100 0 15656 1570 16592 39817 28108 28108 1 36202 0 VTADVINAAEK ELQDCEGLIVRSATKVTADVINAAEKLQVV SATKVTADVINAAEKLQVVGRAGTGVDNVD K V T E K L 3 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1129.5979 O43175 O43175 59 69 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.00013201 195.83 By MS/MS 6 0 1 1 0 0 0 15657 185 16593 39818 28109 28109 1 0 0 VTADVINAAEKLQVVGR ELQDCEGLIVRSATKVTADVINAAEKLQVV ADVINAAEKLQVVGRAGTGVDNVDLEAATR K V T G R A 3 1 1 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 4 0 0 17 1 1781.9999 O43175 O43175 59 75 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2;3 9.2758E-08 171.36 By MS/MS 6 0 2 2 25413000 25413000 0 15658 185 16594 39819;39820 28110;28111;28112 28112 3 198170 0 VTAEDKGTGNK QIEVTFEIDVNGILRVTAEDKGTGNKNKIT GILRVTAEDKGTGNKNKITITNDQNRLTPE R V T N K N 1 0 1 1 0 0 1 2 0 0 0 2 0 0 0 0 2 0 0 1 0 0 11 1 1118.5568 P11021 P11021 511 521 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00044033 167.93 By MS/MS 6 0.816 1 1 1 3 995390 995390 0 15659 545 16595 39821;39822;39823 28113;28114 28113 2 26013 0 VTAEDKGTGNKNK QIEVTFEIDVNGILRVTAEDKGTGNKNKIT LRVTAEDKGTGNKNKITITNDQNRLTPEEI R V T N K I 1 0 2 1 0 0 1 2 0 0 0 3 0 0 0 0 2 0 0 1 0 0 13 2 1360.6947 P11021 P11021 511 523 HSPA5 78 kDa glucose-regulated protein yes yes 2 5.9522E-05 174.23 By MS/MS 5.5 0.5 1 1 2 377260 377260 0 15660 545 16596 39824;39825 28115 28115 1 13220 0 VTAIDFR AKQAFVQRDNARTGRVTAIDFRDIMVTIRP RDNARTGRVTAIDFRDIMVTIRPHVLTPFV R V T F R D 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 7 0 820.4443 Q9UJS0 Q9UJS0 178 184 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 0.040651 107.59 By MS/MS 6.5 0.5 1 1 2 2342100 2342100 0 15661 2798 16597 39826;39827 28116 28116 1 27971 0 VTAIHIDPATHR SILGSAKHGLYLPTRVTAIHIDPATHRQKL PTRVTAIHIDPATHRQKLYTLQDKAQVADV R V T H R Q 2 1 0 1 0 0 0 0 2 2 0 0 0 0 1 0 2 0 0 1 0 0 12 0 1329.7153 P49327 P49327 1052 1063 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.0018127 113.61 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 5867800 5867800 0 15662 915 16598 39828;39829;39830;39831;39832;39833 28117;28118;28119 28118 3 183310 0 VTAQGPGLEPSGNIANK PFEVYVDKSQGDASKVTAQGPGLEPSGNIA AQGPGLEPSGNIANKTTYFEIFTAGAGTGE K V T N K T 2 0 2 0 0 1 1 3 0 1 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1651.8529 P21333 P21333 384 400 FLNA Filamin-A yes yes 2 4.6531E-55 276.71 By MS/MS 2 0.816 1 1 1 3 3524800 3524800 0 15663 648 16599 39834;39835;39836 28120;28121 28120 2 147030 0 VTASPQSLCALR FSPGQSFPASQAHLRVTASPQSLCALRAVD HLRVTASPQSLCALRAVDQSVLLMRPEAEL R V T L R A 2 1 0 0 1 1 0 0 0 0 2 0 0 0 1 2 1 0 0 1 0 0 12 0 1301.6762 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 587 598 yes yes 2 0.0015096 127.51 By MS/MS 1 0 1 1 446470 446470 0 + 15664 30 16600 39837 28122 28122 1 21814 0 VTAVIPCFPYAR LLIMINACKIASASRVTAVIPCFPYARQDK ASRVTAVIPCFPYARQDKKDKSRAPISAKL R V T A R Q 2 1 0 0 1 0 0 0 0 1 0 0 0 1 2 0 1 0 1 2 0 0 12 0 1392.7224 P60891;P11908 P60891 85 96 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 2 0.0032234 114.97 By MS/MS 8 0 1 1 1128700 1128700 0 15665 1076;559 16601 39838 28123 28123 1 74461 0 VTAVPTLLK PYWKDPNNDFRKNLKVTAVPTLLKYGTPQK FRKNLKVTAVPTLLKYGTPQKLVESECLQA K V T L K Y 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 0 2 0 0 2 0 0 9 0 940.59572 Q9BRA2 Q9BRA2 90 98 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 2 0.01017 104.44 By MS/MS 10 0 1 1 433930 433930 0 15666 2321 16602 39839 28124 28124 1 461220 0 VTCDQTYLLR TGWTGIALLYLQLYRVTCDQTYLLRSLDYV LQLYRVTCDQTYLLRSLDYVKRTLRNLNGR R V T L R S 0 1 0 1 1 1 0 0 0 0 2 0 0 0 0 0 2 0 1 1 0 0 10 0 1267.6231 Q9NS86 Q9NS86 119 128 LANCL2 LanC-like protein 2 yes yes 2 0.027274 87.298 By MS/MS 7.5 0.5 1 1 2 920370 920370 0 15667 2621 16603 39840;39841 28125 28125 1 20241 0 VTCIDPNPNFEK CGTGANFKFYPPGCRVTCIDPNPNFEKFLI GCRVTCIDPNPNFEKFLIKSIAENRHLQFE R V T E K F 0 0 2 1 1 0 1 0 0 1 0 1 0 1 2 0 1 0 0 1 0 0 12 0 1432.6657 Q9H8H3 Q9H8H3 94 105 METTL7A Methyltransferase-like protein 7A yes yes 2 8.6833E-05 157.97 By MS/MS 9 0 1 1 504260 504260 0 15668 2525 16604 39842 28126 28126 1 289400 0 VTCLESGLR TQAATQVVLNVPETRVTCLESGLRVASEDS NVPETRVTCLESGLRVASEDSGLSTCTVGL R V T L R V 0 1 0 0 1 0 1 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 1033.5226 O75439 O75439 60 68 PMPCB Mitochondrial-processing peptidase subunit beta yes yes 2 0.00058512 151.44 By MS/MS 7.5 0.5 1 1 2 5222900 5222900 0 15669 311 16605 39843;39844 28127 28127 1 105340 0 VTDAIVLLDR SVLETVEVLQKEGLKVTDAIVLLDREQGGK KEGLKVTDAIVLLDREQGGKDKLQAHGIRL K V T D R E 1 1 0 2 0 0 0 0 0 1 2 0 0 0 0 0 1 0 0 2 0 0 10 0 1113.6394 P11172 P11172 146 155 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes yes 2 0.0001551 159.4 By MS/MS 6.5 0.5 1 1 2 2937000 2937000 0 15670 548 16606 39845;39846 28128 28128 1 24787 0 VTDALNATR VGGTSDVEVNEKKDRVTDALNATRAAVEEG NEKKDRVTDALNATRAAVEEGIVLGGGCAL R V T T R A 2 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 9 0 959.50361 P10809 P10809 421 429 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 8.1748E-08 195.57 By MS/MS By MS/MS 6 2.68 1 1 1 1 2 2 2 1 1 8 4 446310000 444510000 1805200 15671 544 16607 39847;39848;39849;39850;39851;39852;39853;39854;39855;39856;39857;39858 28129;28130;28131;28132;28133;28134;28135;28136;28137 28133 8 5151800 5702900 VTDDLVCLVYK VVLKYRHSDGNLCVKVTDDLVCLVYKTDQA LCVKVTDDLVCLVYKTDQAQDVKKIEKFHS K V T Y K T 0 0 0 2 1 0 0 0 0 0 2 1 0 0 0 0 1 0 1 3 0 0 11 0 1323.6744 P49458 P49458 42 52 SRP9 Signal recognition particle 9 kDa protein yes yes 2 0.0017811 144.77 By MS/MS 10 0 1 1 0 0 0 15672 919 16608 39859 28138 28138 1 0 0 VTDKLTPIHDR GADSRTTTGSYIANRVTDKLTPIHDRIFCC IANRVTDKLTPIHDRIFCCRSGSAADTQAV R V T D R I 0 1 0 2 0 0 0 0 1 1 1 1 0 0 1 0 2 0 0 1 0 0 11 1 1293.7041 P28072 P28072 64 74 PSMB6 Proteasome subunit beta type-6 yes yes 3;4 0.0039862 99.5 By MS/MS 9 0 2 2 2721800 2721800 0 15673 714 16609 39860;39861 28139;28140 28139 2 1562100 0 VTDLLGGLFSK SDNAFIRASRALTDKVTDLLGGLFSKTEMS LTDKVTDLLGGLFSKTEMSEVLTEILRVDP K V T S K T 0 0 0 1 0 0 0 2 0 0 3 1 0 1 0 1 1 0 0 1 0 0 11 0 1148.6441 O43615 O43615 283 293 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00057343 167.93 By MS/MS 6.5 0.5 1 1 2 775530 775530 0 15674 209 16610 39862;39863 28141 28141 1 11660 0 VTDPVGDIVSFMHSFEEK FRFALRFIRPDPRSRVTDPVGDIVSFMHSF PVGDIVSFMHSFEEKYGRAHPVFYQGTYSQ R V T E K Y 0 0 0 2 0 0 2 1 1 1 0 1 1 2 1 2 1 0 0 3 0 0 18 0 2035.9561 Q96CS3 Q96CS3 129 146 FAF2 FAS-associated factor 2 yes yes 2 0.0073425 107.46 By MS/MS 6 0 1 1 272800 272800 0 15675 2140 16611 39864 28142 28142 1 2127.3 0 VTEDALIR PGTCTFDHRHLYTKKVTEDALIRTVSYNIL RHLYTKKVTEDALIRTVSYNILADTYAQTE K V T I R T 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 915.50255 Q6L8Q7 Q6L8Q7 289 296 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.01563 113.41 By MS/MS 5 0 1 1 2283200 2283200 0 15676 1687 16612 39865 28143 28143 1 93847 0 VTEELLTDNR LNFKMGNRHKFTGKKVTEELLTDNRYLLLV FTGKKVTEELLTDNRYLLLVLMDAERAWSY K V T N R Y 0 1 1 1 0 0 2 0 0 0 2 0 0 0 0 0 2 0 0 1 0 0 10 0 1188.5986 Q9UHB9 Q9UHB9 113 122 SRP68 Signal recognition particle subunit SRP68 yes yes 2 1.244E-10 204.79 By MS/MS 5 0 1 1 2762500 2762500 0 15677 2779 16613 39866 28144 28144 1 113550 0 VTEFLQQK QHLFMILASPRYVDRVTEFLQQKLKQSQLL SPRYVDRVTEFLQQKLKQSQLLALKKELMV R V T Q K L 0 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 0 991.53385 Q96JB5 Q96JB5 433 440 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 4.6884E-13 217.64 By MS/MS 5 0 1 1 0 0 0 15678 2206 16614 39867 28145 28145 1 0 0 VTEGGEPYR HVYGIPEHADNLRLKVTEGGEPYRLYNLDV DNLRLKVTEGGEPYRLYNLDVFQYELYNPM K V T Y R L 0 1 0 0 0 0 2 2 0 0 0 0 0 0 1 0 1 0 1 1 0 0 9 0 1006.472 Q14697 Q14697 270 278 GANAB Neutral alpha-glucosidase AB yes yes 2 0.0006944 148.99 By MS/MS 4.5 0.5 1 1 2 2082300 2082300 0 15679 1443 16615 39868;39869 28146 28146 1 60523 0 VTEGQQER ELNKRGRVLVNDAQKVTEGQQERLERQHWT LVNDAQKVTEGQQERLERQHWTMTKIQKHQ K V T E R L 0 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 8 0 945.45157 Q13263 Q13263 320 327 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.0058691 133.86 By MS/MS 3 1 1 1 2 62785 62785 0 15680 1351 16616 39870;39871 28147;28148 28147 2 3120.7 0 VTELALTASDR REMKPVIFLDVFLPRVTELALTASDRQTKV FLPRVTELALTASDRQTKVAACELLHSMVM R V T D R Q 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 2 0 0 1 0 0 11 0 1174.6194 P78527 P78527 914 924 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 4.9505E-18 233.09 By MS/MS By MS/MS 2.67 1.49 2 1 1 1 1 5 1 27008000 26964000 44732 15681 1197 16617 39872;39873;39874;39875;39876;39877 28149;28150;28151;28152 28151 4 1149900 44732 VTEQQTSIQR ELLSKLQETDKHLQRVTEQQTSIQRKQEKL KHLQRVTEQQTSIQRKQEKLHCHDHEKQMN R V T Q R K 0 1 0 0 0 3 1 0 0 1 0 0 0 0 0 1 2 0 0 1 0 0 10 0 1188.6099 Q9BVV6 Q9BVV6 209 218 KIAA0586 Protein TALPID3 yes yes 2 0.00080225 153.1 By MS/MS 2 0 1 1 184230 184230 0 15682 2385 16618 39878 28153 28153 1 9157.1 0 VTFSEDDEIINPEDVDPSVGR NLDIQRPKRKRKNSRVTFSEDDEIINPEDV DEIINPEDVDPSVGRFRNMVQTAVVPVKKK R V T G R F 0 1 1 4 0 0 3 1 0 2 0 0 0 1 2 2 1 0 0 3 0 0 21 0 2332.0707 Q12972 Q12972 201 221 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes yes 2 0.012539 95.195 By MS/MS 7 0 1 1 653310 653310 0 15683 1319 16619 39879 28154 28154 1 11675 0 VTGADVPMPYAK MEGPAFNFLDAPAVRVTGADVPMPYAKILE AVRVTGADVPMPYAKILEDNSIPQVKDIIF R V T A K I 2 0 0 1 0 0 0 1 0 0 0 1 1 0 2 0 1 0 1 2 0 0 12 0 1247.622 P11177 P11177 325 336 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 7.6087E-05 156.83 By MS/MS By MS/MS 7.75 0.924 6 4 1 1 8 4 22002000 21883000 119320 15684 549 16620;16621 39880;39881;39882;39883;39884;39885;39886;39887;39888;39889;39890;39891 28155;28156;28157;28158;28159;28160;28161;28162 28159 345 8 1023800 671190 VTGELAFDTSSADVR WEMMPPTILIDLLKKVTGELAFDTSSADVR VTGELAFDTSSADVRCSVFKCLPMILDNKL K V T V R C 2 1 0 2 0 0 1 1 0 0 1 0 0 1 0 2 2 0 0 2 0 0 15 0 1566.7526 Q86XI2 Q86XI2 423 437 NCAPG2 Condensin-2 complex subunit G2 yes yes 2 6.3616E-07 144.28 By MS/MS 3.5 0.5 1 1 2 661790 661790 0 15685 1840 16622 39892;39893 28163 28163 0 17801 0 VTGQNQEQFLLLAK ______________________________ KVTGQNQEQFLLLAKSAKGAALATLIHQVL K V T A K S 1 0 1 0 0 3 1 1 0 0 3 1 0 1 0 0 1 0 0 1 0 0 14 0 1587.8621 Q9UBW8 Q9UBW8 7 20 COPS7A COP9 signalosome complex subunit 7a yes yes 2 6.5399E-18 228.93 By MS/MS 8 0 1 1 3824600 3824600 0 15686 2760 16623 39894 28164 28164 1 252310 0 VTGSLETK LEFTSSGSANTETTKVTGSLETKYRWTEYG ANTETTKVTGSLETKYRWTEYGLTFTEKWN K V T T K Y 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 8 0 833.44945 P21796 P21796 54 61 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 0.038612 95.815 By MS/MS 8 0 1 1 1774500 1774500 0 15687 650 16624 39895 28165 28165 1 117070 0 VTHAVVTVPAYFNDAQR LTKMKETAEAYLGKKVTHAVVTVPAYFNDA HAVVTVPAYFNDAQRQATKDAGTIAGLNVM K V T Q R Q 3 1 1 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 1 4 0 0 17 0 1886.9639 P11021 P11021 165 181 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00019572 131.69 By MS/MS 5 0 1 1 2321500 2321500 0 15688 545 16625 39896 28166 28166 1 95424 0 VTHELQAMKDK LLDSEIKIMKSEVLRVTHELQAMKDKIKEN EVLRVTHELQAMKDKIKENSEKIKVNKTLP R V T D K I 1 0 0 1 0 1 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 11 1 1298.6653 P17980 P17980 62 72 PSMC3 26S protease regulatory subunit 6A yes yes 3 0.0011705 117.95 By MS/MS 6 0 1 1 1188300 1188300 0 15689 618 16626 39897 28167 28167 1 9266.4 0 VTIANADLALAQGDIER QDAIHEFSGTSEEVRVTIANADLALAQGDI IANADLALAQGDIERALSILQNVTAEQPYF R V T E R A 4 1 1 2 0 1 1 1 0 2 2 0 0 0 0 0 1 0 0 1 0 0 17 0 1768.9319 Q7Z4L5 Q7Z4L5 656 672 TTC21B Tetratricopeptide repeat protein 21B yes yes 2 0.0066337 100.18 By MS/MS 3 0 1 1 418530 418530 0 15690 1794 16627 39898 28168 28168 1 10926 0 VTKDGVTVAK KGRTVIIEQSWGSPKVTKDGVTVAKSIDLK WGSPKVTKDGVTVAKSIDLKDKYKNIGAKL K V T A K S 1 0 0 1 0 0 0 1 0 0 0 2 0 0 0 0 2 0 0 3 0 0 10 1 1016.5866 P10809 P10809 73 82 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 1;2;3 2.4445E-06 191.4 By MS/MS 5.88 1.53 2 1 3 5 3 3 17 94923000 94923000 0 15691 544 16628 39899;39900;39901;39902;39903;39904;39905;39906;39907;39908;39909;39910;39911;39912;39913;39914;39915 28169;28170;28171;28172;28173;28174;28175;28176 28172 6 848980 0 VTLAQTAVPVLCGSALK FDLLPAEKLQTAIHRVTLAQTAVPVLCGSA LAQTAVPVLCGSALKNKGIQPLLDAVTMYL R V T L K N 3 0 0 0 1 1 0 1 0 0 3 1 0 0 1 1 2 0 0 3 0 0 17 0 1726.9651 Q969S9 Q969S9 318 334 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 2 1.5672E-10 166.79 By MS/MS 5.5 0.5 1 1 2 2615600 2615600 0 15692 2107 16629 39916;39917 28177 28177 1 42026 0 VTLATLK IVEAEAMNYEGSPIKVTLATLKMSVQPTVS NYEGSPIKVTLATLKMSVQPTVSLGGFEIT K V T L K M 1 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 7 0 744.47454 P06748 P06748 74 80 NPM1 Nucleophosmin yes yes 2 0.047626 102.77 By MS/MS 7 0 1 1 2354400 2354400 0 15693 485 16630 39918 28178 28178 1 42073 0 VTLDLQNSTEK LKLHDVLKATHANYKVTLDLQNSTEKFGGF ANYKVTLDLQNSTEKFGGFLRSALDVLSQI K V T E K F 0 0 1 1 0 1 1 0 0 0 2 1 0 0 0 1 2 0 0 1 0 0 11 0 1246.6405 P42858 P42858 1252 1262 HTT Huntingtin yes yes 2 0.0018447 132.25 By MS/MS 1 0 1 1 231900 231900 0 15694 858 16631 39919 28179 28179 1 11330 0 VTLELGGK GRVIQVAAGSSNLKRVTLELGGKSPNIIMS GSSNLKRVTLELGGKSPNIIMSDADMDWAV R V T G K S 0 0 0 0 0 0 1 2 0 0 2 1 0 0 0 0 1 0 0 1 0 0 8 0 815.47527 P30837;P05091 P05091 282 289 ALDH1B1;ALDH2 Aldehyde dehydrogenase X, mitochondrial;Aldehyde dehydrogenase, mitochondrial no no 2 0.052476 90.37 By MS/MS 6 0 1 1 9690600 9690600 0 15695 467;747 16632 39920 28180 28180 1 75567 0 VTLEYRPVIDK WRKHTLSYVDVGTGKVTLEYRPVIDKTLNE GTGKVTLEYRPVIDKTLNEADCATVPPAIR K V T D K T 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 1 0 1 2 0 0 11 1 1331.7449 P31040 P31040 637 647 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 2 0.010824 127.42 By MS/MS 5 0 1 1 2475700 2475700 0 15696 749 16633 39921 28181 28181 1 101760 0 VTLGTQPTVLR FGLNIETGLLSDRKKVTLGTQPTVLRTFRS DRKKVTLGTQPTVLRTFRSLSTTNVFACSD K V T L R T 0 1 0 0 0 1 0 1 0 0 2 0 0 0 1 0 3 0 0 2 0 0 11 0 1183.6925 Q16531 Q16531 629 639 DDB1 DNA damage-binding protein 1 yes yes 2 0.00023463 146.11 By MS/MS 3 1.41 1 1 1 1 1 5 3854500 3854500 0 15697 1537 16634 39922;39923;39924;39925;39926 28182;28183 28182 2 129100 0 VTLLDLMIAK ELVQAMFPKLNNQERVTLLDLMIAKITSDE NNQERVTLLDLMIAKITSDEPLTKDDIPVF R V T A K I 1 0 0 1 0 0 0 0 0 1 3 1 1 0 0 0 1 0 0 1 0 0 10 0 1115.6624 Q9UBB4 Q9UBB4 244 253 ATXN10 Ataxin-10 yes yes 2 1.4993E-08 195.32 By MS/MS 6.67 0.471 1 2 3 1899500 1899500 0 15698 2744 16635;16636 39927;39928;39929 28184;28185;28186 28184 1604 3 31448 0 VTLLETEMLLSK KVMVDENTWTNLLSRVTLLETEMLLSKKND LSRVTLLETEMLLSKKNDEFIEFNEVSEDY R V T S K K 0 0 0 0 0 0 2 0 0 0 4 1 1 0 0 1 2 0 0 1 0 0 12 0 1375.7633 Q9C0F1 Q9C0F1 283 294 CEP44 Centrosomal protein of 44 kDa yes yes 2 5.2459E-05 160.18 By MS/MS 7 0 1 1 224890 224890 0 15699 2438 16637 39930 28187 28187 1499 1 4018.9 0 VTLMQLPTR IIAFWVPEDKDIPARVTLMQLPTRQEIRVR KDIPARVTLMQLPTRQEIRVRNLFNVVDCK R V T T R Q 0 1 0 0 0 1 0 0 0 0 2 0 1 0 1 0 2 0 0 1 0 0 9 0 1057.5954 P55884 P55884 493 501 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0011028 133.99 By MS/MS 3 1.41 1 1 1 1 1 5 8658600 8658600 0 15700 1040 16638 39931;39932;39933;39934;39935 28188 28188 809 1 263430 0 VTLMQLPTRQEIR IIAFWVPEDKDIPARVTLMQLPTRQEIRVR ARVTLMQLPTRQEIRVRNLFNVVDCKLHWQ R V T I R V 0 2 0 0 0 2 1 0 0 1 2 0 1 0 1 0 2 0 0 1 0 0 13 1 1583.8817 P55884 P55884 493 505 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3 0.0049886 93.623 By MS/MS 4 0 1 1 2200200 2200200 0 15701 1040 16639 39936 28189 28189 809 1 60063 0 VTLTSEEEAR VPCILGQNGISDLVKVTLTSEEEARLKKSA SDLVKVTLTSEEEARLKKSADTLWGIQKEL K V T A R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1133.5564 P00338 P00338 306 315 LDHA L-lactate dehydrogenase A chain yes yes 2 2.259E-21 237.92 By MS/MS By matching 8 0 2 1 1 10454000 10328000 126020 15702 424 16640 39937;39938 28190 28190 1 681350 1075100 VTLTSEEEARLK VPCILGQNGISDLVKVTLTSEEEARLKKSA LVKVTLTSEEEARLKKSADTLWGIQKELQF K V T L K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 0 1 2 0 0 1 0 0 12 1 1374.7355 P00338 P00338 306 317 LDHA L-lactate dehydrogenase A chain yes yes 2 0.00041478 164.66 By MS/MS 8 0 1 1 663040 663040 0 15703 424 16641 39939 28191 28191 1 43740 0 VTLVFEHVDQDLR LMDVCATSRTDREIKVTLVFEHVDQDLRTY IKVTLVFEHVDQDLRTYLDKAPPPGLPAET K V T L R T 0 1 0 2 0 1 1 0 1 0 2 0 0 1 0 0 1 0 0 3 0 0 13 0 1569.8151 P11802 P11802 89 101 CDK4 Cyclin-dependent kinase 4 yes yes 3 0.0083978 88.021 By MS/MS 8 0 1 1 1260600 1260600 0 15704 558 16642 39940 28192 28192 1 83163 0 VTMESALTAR PHRPCKLALGSDGVRVTMESALTARDRVGV SDGVRVTMESALTARDRVGVQDFVLLENFT R V T A R D 2 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 2 0 0 1 0 0 10 0 1077.5488 O00159 O00159 34 43 MYO1C Unconventional myosin-Ic yes yes 3 0.044539 74.533 By MS/MS 7.5 0.5 1 1 2 2164900 2164900 0 15705 72 16643 39941;39942 28193 28193 1 43750 0 VTMLFLGLHNVR FGAPPHAGGGIGLERVTMLFLGLHNVRQTS LERVTMLFLGLHNVRQTSMFPRDPKRLTP_ R V T V R Q 0 1 1 0 0 0 0 1 1 0 3 0 1 1 0 0 1 0 0 2 0 0 12 0 1398.7806 P14868 P14868 476 487 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 3 0.045792 64.103 By MS/MS 6 0 1 1 1005700 1005700 0 15706 594 16644 39943 28194 28194 1 7842.2 0 VTMQNLNDR GGFGGDGGLLSGNEKVTMQNLNDRLASYLD LSGNEKVTMQNLNDRLASYLDKVRALEESN K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1089.5237 CON__P13645;P13645;CON__P02535-1;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9;CON__P02533;P02533;CON__A2A4G1;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 CON__P13645 148 156 KRT10;KRT28;KRT25;KRT27;KRT26;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 9.9821E-10 214.05 By MS/MS By MS/MS 5 2.59 3 3 4 3 3 4 3 3 2 1 12 17 50538000 27959000 22579000 + 15707 49;35;47 16645;16646 39944;39945;39946;39947;39948;39949;39950;39951;39952;39953;39954;39955;39956;39957;39958;39959;39960;39961;39962;39963;39964;39965;39966;39967;39968;39969;39970;39971;39972 28195;28196;28197;28198;28199;28200;28201;28202;28203;28204;28205;28206;28207;28208;28209;28210;28211;28212;28213;28214;28215;28216;28217;28218;28219;28220 28210 19 26 3602300 62732000 VTNEDFKK CTEAGLMALRERRMKVTNEDFKKSKENVLY LRERRMKVTNEDFKKSKENVLYKKQEGTPE K V T K K S 0 0 1 1 0 0 1 0 0 0 0 2 0 1 0 0 1 0 0 1 0 0 8 1 979.49746 P62191 P62191 414 421 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.02614 130.56 By MS/MS By matching 6 0 2 1 1 1677900 1669800 8103 15708 1116 16647 39973;39974 28221 28221 1 13021 24851 VTNEFVHINNLK WAISPRGAGWLFGAKVTNEFVHINNLKLIC GAKVTNEFVHINNLKLICRAHQLVHEGYKF K V T L K L 0 0 3 0 0 0 1 0 1 1 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1426.7569 O00743 O00743 220 231 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 3.5347E-05 169.21 By MS/MS 8 0 1 1 1213000 1213000 0 15709 106 16648 39975 28222 28222 1 80021 0 VTNFVAQR NCFLYGVFNGYDGNRVTNFVAQRLSAELLL NGYDGNRVTNFVAQRLSAELLLGQLNAEHA R V T Q R L 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 2 0 0 8 0 933.50321 Q15750 Q15750 76 83 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 2 0.00053152 182.68 By MS/MS 6 0 1 1 2203000 2203000 0 15710 1516 16649 39976 28223 28223 1 17179 0 VTNLSEDTR SMQPNRRADDNATIRVTNLSEDTRETDLQE DNATIRVTNLSEDTRETDLQELFRPFGSIS R V T T R E 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 9 0 1033.504 O75821 O75821 243 251 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 2 1.9135E-06 199.89 By MS/MS By MS/MS 8.2 1.17 2 1 1 1 4 1 27097000 26723000 373410 15711 330 16650 39977;39978;39979;39980;39981 28224;28225;28226;28227 28227 4 1109600 1532900 VTNPNAR NRKAIVERAAQLAIRVTNPNARLRSEENE_ RAAQLAIRVTNPNARLRSEENE________ R V T A R L 1 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 7 0 770.4035 P62910 P62910 122 128 RPL32 60S ribosomal protein L32 yes yes 2 0.040651 107.59 By MS/MS By matching 9 0 2 1 1 279450 257780 21669 15712 1160 16651 39982;39983 28228 28228 1 147940 233530 VTNYIFDSLR IKKDPYTATMIGFSKVTNYIFDSLRGSDPS IGFSKVTNYIFDSLRGSDPSTHQRPPSEMA K V T L R G 0 1 1 1 0 0 0 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 10 0 1226.6295 Q8TC07 Q8TC07 253 262 TBC1D15 TBC1 domain family member 15 yes yes 2 0.0010451 120.77 By MS/MS 5 0 1 1 998260 998260 0 15713 1991 16652 39984 28229 28229 1 41033 0 VTPDTDWAR ICTTSAIQNRFKYARVTPDTDWARLLQDHP RFKYARVTPDTDWARLLQDHPWLLSQNLVV R V T A R L 1 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 2 1 0 1 0 0 9 0 1059.4985 P53396 P53396 34 42 ACLY ATP-citrate synthase yes yes 2 0.0028304 120.87 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 26255000 26255000 0 15714 1001 16653 39985;39986;39987;39988;39989;39990 28230 28230 1 712980 0 VTPPEGYEVVTVFPK FVEDQIYCEKHARERVTPPEGYEVVTVFPK VTPPEGYEVVTVFPK_______________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.040387 71.176 By MS/MS 7.5 0.5 1 1 2 4505600 4505600 0 15715 71 16654 39991;39992 28231;28232 28231 2 216300 0 VTPTRTEIIILATR TRELAEDGYSGVEVRVTPTRTEIIILATRT RVTPTRTEIIILATRTQNVLGEKGRRIREL R V T T R T 1 2 0 0 0 0 1 0 0 3 1 0 0 0 1 0 4 0 0 1 0 0 14 1 1582.9406 P23396 P23396 41 54 RPS3 40S ribosomal protein S3 yes yes 2;3 0.011534 136.38 By MS/MS By matching 8 0 3 2 1 2571100 2517700 53383 15716 668 16655 39993;39994;39995 28233;28234 28233 2 166090 455420 VTQLTDR QYPLYDLDLGKFGEKVTQLTDRWQRIDKQI DLGKFGEKVTQLTDRWQRIDKQIDFRLWDL K V T D R W 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 7 0 831.44503 P15924 P15924 860 866 DSP Desmoplakin yes yes 2 0.020389 125.31 By MS/MS By matching 2.33 0.471 2 1 2 1 585030 548960 36074 15717 603 16656 39996;39997;39998 28235 28235 1 23507 30371 VTQLYVPASR PNHWLSEQEDIKADKVTQLYVPASRHVWRF IKADKVTQLYVPASRHVWRFRRMGRIGPLQ K V T S R H 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 2 0 0 10 0 1132.6241 Q15386 Q15386 639 648 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.0010223 121.83 By MS/MS 4.5 0.5 1 1 2 1557200 1557200 0 15718 1494 16657 39999;40000 28236 28236 1 44338 0 VTQQGLK ELQLCKGLVQALQTKVTQQGLKMVVPGLDG LVQALQTKVTQQGLKMVVPGLDGAQIPRDP K V T L K M 0 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 7 0 772.4443 P49327 P49327 1152 1158 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.0088489 157.21 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 15985000 15985000 0 15719 915 16658 40001;40002;40003;40004;40005;40006;40007;40008;40009 28237;28238;28239 28238 3 660580 0 VTQSNFAVGYK WLAGYQMNFETAKSRVTQSNFAVGYKTDEF AKSRVTQSNFAVGYKTDEFQLHTNVNDGTE R V T Y K T 1 0 1 0 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 11 0 1212.6139 P21796 P21796 164 174 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 3.8361E-22 242.35 By MS/MS 8 0 1 1 1885100 1885100 0 15720 650 16659 40010 28240 28240 1 124360 0 VTQVDGHSSK TAEEKAIVQQWLEYRVTQVDGHSSKNDIHT WLEYRVTQVDGHSSKNDIHTLLKDLNSYLE R V T S K N 0 0 0 1 0 1 0 1 1 0 0 1 0 0 0 2 1 0 0 2 0 0 10 0 1056.52 O43324 O43324 79 88 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.0003193 152.04 By MS/MS By matching 9.33 0.471 2 1 2 1 165420 158770 6649.8 15721 194 16660 40011;40012;40013 28241;28242 28241 2 100630 71665 VTQVDGNSPVR SFVSKKNYCNIQVTKVTQVDGNSPVRFSTE QVTKVTQVDGNSPVRFSTETTFLVDKYEIL K V T V R F 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 1 1 0 0 3 0 0 11 0 1170.5993 P48444 P48444 486 496 ARCN1 Coatomer subunit delta yes yes 2 1.1161E-10 202.03 By MS/MS By MS/MS 5 2.35 1 2 1 3 1 14172000 14149000 23086 15722 903 16661 40014;40015;40016;40017 28243;28244;28245 28245 3 120680 70803 VTQVENEEK WTRIQIRVNSSRLVRVTQVENEEKLKELEQ SSRLVRVTQVENEEKLKELEQFSIWNFFSS R V T E K L 0 0 1 0 0 1 3 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 9 0 1074.5193 O14524 O14524 95 103 TMEM194A Transmembrane protein 194A yes yes 2 0.00056798 151.83 By MS/MS 1.5 0.5 1 1 2 181600 181600 0 15723 111 16662 40018;40019 28246 28246 1 8933 0 VTSAHKGPDETLR IKKACGNFGIPCELRVTSAHKGPDETLRIK LRVTSAHKGPDETLRIKAEYEGDGIPTVFV R V T L R I 1 1 0 1 0 0 1 1 1 0 1 1 0 0 1 1 2 0 0 1 0 0 13 1 1409.7263 P22234 P22234 299 311 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 2;3 0.01213 112.84 By MS/MS 7.33 0.471 2 1 3 7133800 7133800 0 15724 656 16663 40020;40021;40022 28247;28248 28247 2 141920 0 VTSAVEALLSADSASR ARDGLGGLPDIVRDRVTSAVEALLSADSAS TSAVEALLSADSASRKQEVQAWDGEVRQVS R V T S R K 4 1 0 1 0 0 1 0 0 0 2 0 0 0 0 4 1 0 0 2 0 0 16 0 1575.8104 P45974 P45974 147 162 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 3.5047E-15 210.93 By MS/MS By matching 4 0 2 1 1 701740 677840 23897 15725 873 16664 40023;40024 28249 28249 1 18504 49935 VTSEDLILIGNELDLACGER GRLFAVVHFASRQWKVTSEDLILIGNELDL LILIGNELDLACGERIRLEKVLLVGADNFT K V T E R I 1 1 1 2 1 0 3 2 0 2 4 0 0 0 0 1 1 0 0 1 0 0 20 0 2216.0995 Q7Z2W9 Q7Z2W9 108 127 MRPL21 39S ribosomal protein L21, mitochondrial yes yes 2 0.010613 73.758 By MS/MS 9.5 0.5 1 1 2 85183 85183 0 15726 1778 16665 40025;40026 28250 28250 1 61691 0 VTSEGAGLQLQK IFLARNNTIVNELVRVTSEGAGLQLQKVTV LVRVTSEGAGLQLQKVTVLGVATAPQQVLS R V T Q K V 1 0 0 0 0 2 1 2 0 0 2 1 0 0 0 1 1 0 0 1 0 0 12 0 1229.6616 P10253 P10253 892 903 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 2 2.4883E-05 210.64 By MS/MS 4 0.816 1 1 1 3 1649200 1649200 0 15727 535 16666 40027;40028;40029 28251 28251 1 50135 0 VTSLPDNHK EELVAKEVLHALKEKVTSLPDNHKNALAAN HALKEKVTSLPDNHKNALAANIDEIVFTST K V T H K N 0 0 1 1 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 1 0 0 9 0 1009.5193 Q8WWC4 Q8WWC4 183 191 C2orf47 Uncharacterized protein C2orf47, mitochondrial yes yes 2 0.00013614 168.27 By MS/MS 9 0 1 1 765270 765270 0 15728 2037 16667 40030 28252 28252 1 439200 0 VTSSEPPNPASSSK NFLFSNPPPTQTSVRVTSSEPPNPASSSKS RVTSSEPPNPASSSKSEKREPVRKRVLEKR R V T S K S 1 0 1 0 0 0 1 0 0 0 0 1 0 0 3 5 1 0 0 1 0 0 14 0 1386.6627 Q92575 Q92575 446 459 UBXN4 UBX domain-containing protein 4 yes yes 2 0.014133 88.187 By MS/MS 6 0.816 1 1 1 3 9888700 9888700 0 15729 2062 16668 40031;40032;40033 28253 28253 1 83174 0 VTTADPYASGK KVLHIPEFYVGSILRVTTADPYASGKISQF SILRVTTADPYASGKISQFLGICIQRSGRG R V T G K I 2 0 0 1 0 0 0 1 0 0 0 1 0 0 1 1 2 0 1 1 0 0 11 0 1108.5401 P49406 P49406 119 129 MRPL19 39S ribosomal protein L19, mitochondrial yes yes 2 0.0045003 109.83 By MS/MS 8.5 0.5 1 1 2 2920700 2920700 0 15730 917 16669 40034;40035 28254 28254 1 213470 0 VTTEQYQK EQLARLEERSSEFYRVTTEQYQKAAEEVEA RSSEFYRVTTEQYQKAAEEVEAKFKRYESH R V T Q K A 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 2 0 1 1 0 0 8 0 995.49238 Q9NX63 Q9NX63 158 165 CHCHD3 MICOS complex subunit MIC19 yes yes 2 0.0050946 136.75 By MS/MS By matching 8 0 2 1 1 2348300 2322100 26111 15731 2682 16670 40036;40037 28255 28255 1 153190 222760 VTTPQEGYISR KMCFETLLQFSFSNKVTTPQEGYISRMALS FSNKVTTPQEGYISRMALSVLLKRSQDVLH K V T S R M 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 1 2 0 1 1 0 0 11 0 1249.6303 Q7Z3U7 Q7Z3U7 1595 1605 MON2 Protein MON2 homolog yes yes 2 0.018556 90.653 By MS/MS 3 0 1 1 744690 744690 0 15732 1786 16671 40038 28256 28256 1 19440 0 VTTVTEIGKDVIGLR SGACYSPEFKGQICRVTTVTEIGKDVIGLR VTTVTEIGKDVIGLRISPLQFR________ R V T L R I 0 1 0 1 0 0 1 2 0 2 1 1 0 0 0 0 3 0 0 3 0 0 15 1 1599.9196 P53621 P53621 1203 1217 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2;3 0.015828 111.39 By MS/MS 4.78 1.31 2 2 2 2 1 9 6973300 6973300 0 15733 1005 16672 40039;40040;40041;40042;40043;40044;40045;40046;40047 28257;28258 28258 2 127120 0 VTVDTGVIPASEEK KESQRKFEEETVKSKVTVDTGVIPASEEKA KVTVDTGVIPASEEKAETPTAAEDDNEGDK K V T E K A 1 0 0 1 0 0 2 1 0 1 0 1 0 0 1 1 2 0 0 3 0 0 14 0 1443.7457 O60841 O60841 285 298 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 2.1062E-05 199.19 By MS/MS 3 0 1 1 490550 490550 0 15734 271 16673 40048 28259 28259 1 12806 0 VTVEDPALQIPPFR SIEHLKASFPGHNVKVTVEDPALQIPPFRI KVTVEDPALQIPPFRITFPVRSGKGKKRKD K V T F R I 1 1 0 1 0 1 1 0 0 1 1 0 0 1 3 0 1 0 0 2 0 0 14 0 1580.8562 O60306 O60306 735 748 AQR Intron-binding protein aquarius yes yes 2 0.00085542 126.19 By MS/MS 3 0 1 1 250840 250840 0 15735 243 16674 40049 28260 28260 1 6548.2 0 VTVGDITCTGEGTSK ERSDVQIHVPTFTFRVTVGDITCTGEGTSK VTVGDITCTGEGTSKKLAKHRAAEAAINIL R V T S K K 0 0 0 1 1 0 1 3 0 1 0 1 0 0 0 1 4 0 0 2 0 0 15 0 1523.7137 O75569 O75569 70 84 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes yes 2 1.6862E-15 213.63 By MS/MS 8 0 1 1 998280 998280 0 15736 317 16675 40050 28261 28261 1 65857 0 VTVGVDGTLYK VVDRIRENRGLDALKVTVGVDGTLYKLHPH DALKVTVGVDGTLYKLHPHFAKVMHETVKD K V T Y K L 0 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 2 0 1 3 0 0 11 0 1150.6234 P52789 P52789 856 866 HK2 Hexokinase-2 yes yes 2 0.0092788 99.013 By MS/MS 4 0 1 1 837660 837660 0 15737 992 16676 40051 28262 28262 1 22867 0 VTVIPFYMGMR LELSDVHRETTENIRVTVIPFYMGMREAQN ENIRVTVIPFYMGMREAQNSHVYWWRYCIR R V T M R E 0 1 0 0 0 0 0 1 0 1 0 0 2 1 1 0 1 0 1 2 0 0 11 0 1312.6672 Q9Y2S7 Q9Y2S7 243 253 POLDIP2 Polymerase delta-interacting protein 2 yes yes 2 0.0088908 80.165 By MS/MS 7.5 0.5 1 1 2 1411200 1411200 0 15738 2900 16677 40052;40053 28263;28264 28263 1672;1673 2 52653 0 VTVLTLQDK CASKPEVTVRLNVHKVTVLTLQDKIVKEKF RLNVHKVTVLTLQDKIVKEKFAMVAPDVQI K V T D K I 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 2 0 0 2 0 0 9 0 1015.5914 Q9UBT2 Q9UBT2 459 467 UBA2 SUMO-activating enzyme subunit 2 yes yes 2 0.007135 111.06 By MS/MS 3.5 0.5 1 1 2 1854800 1854800 0 15739 2757 16678 40054;40055 28265 28265 1 49509 0 VTVMASLR PLPEYHVRIAGFDERVTVMASLRRPKRIII IAGFDERVTVMASLRRPKRIIIRGHDEREH R V T L R R 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 2 0 0 8 0 875.48987 P78527 P78527 3726 3733 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.025024 108.46 By MS/MS 2.83 1.34 1 2 1 1 1 6 972720 972720 0 15740 1197 16679 40056;40057;40058;40059;40060;40061 28266;28267 28267 2 38500 0 VTYCPTEPGNYIINIK KVDINTEDLEDGTCRVTYCPTEPGNYIINI TYCPTEPGNYIINIKFADQHVPGSPFSVKV R V T I K F 0 0 2 0 1 0 1 1 0 3 0 1 0 0 2 0 2 0 2 1 0 0 16 0 1880.9342 P21333 P21333 2104 2119 FLNA Filamin-A yes yes 2 0.0067413 100.09 By MS/MS 2.5 0.5 1 1 2 244410 244410 0 15741 648 16680 40062;40063 28268 28268 1 9740.9 0 VTYDSDATSSACR IFHAISPIPHFIAKRVTYDSDATSSACREL KRVTYDSDATSSACRELAYFFTTGIVVSAF R V T C R E 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 3 2 0 1 1 0 0 13 0 1431.5936 O15243 O15243 55 67 LEPROT Leptin receptor gene-related protein yes yes 2 0.003867 109.6 By MS/MS 1.5 0.5 1 1 2 325440 325440 0 15742 162 16681 40064;40065 28269 28269 1 16018 0 VVACNLYPFVK EDNADMARLDFNLIRVVACNLYPFVKTVAS NLIRVVACNLYPFVKTVASPGVTVEEAVEQ R V V V K T 1 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 0 0 1 3 0 0 11 0 1308.69 P31939 P31939 98 108 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 1.6049E-05 174.52 By MS/MS 6 0 1 1 3610900 3610900 0 15743 757 16682 40066 28270 28270 1 28158 0 VVAEPVELAQEFR LSGYVELRYDDEVKRVVAEPVELAQEFRKF KRVVAEPVELAQEFRKFDLNSPWEAFPVYR R V V F R K 2 1 0 0 0 1 3 0 0 0 1 0 0 1 1 0 0 0 0 3 0 0 13 0 1485.7827 O75489 O75489 219 231 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2;3 0.0012503 134.18 By MS/MS By matching 8.6 0.8 3 1 1 4 1 52948000 52918000 29919 15744 313 16683 40067;40068;40069;40070;40071 28271;28272;28273;28274;28275 28272 5 3833300 255240 VVAEPVELAQEFRK LSGYVELRYDDEVKRVVAEPVELAQEFRKF RVVAEPVELAQEFRKFDLNSPWEAFPVYRQ R V V R K F 2 1 0 0 0 1 3 0 0 0 1 1 0 1 1 0 0 0 0 3 0 0 14 1 1613.8777 O75489 O75489 219 232 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 2 0.004348 124.12 By MS/MS 8 0 1 1 1276900 1276900 0 15745 313 16684 40072 28276 28276 1 84239 0 VVAEVGDIPTVLVQNK TDRESFEAVSSWREKVVAEVGDIPTVLVQN VAEVGDIPTVLVQNKIDLLDDSCIKNEEAE K V V N K I 1 0 1 1 0 1 1 1 0 1 1 1 0 0 1 0 1 0 0 5 0 0 16 0 1679.9458 Q9ULC3 Q9ULC3 107 122 RAB23 Ras-related protein Rab-23 yes yes 2 0.00017788 133.32 By MS/MS 8 0 1 1 906210 906210 0 15746 2823 16685 40073 28277 28277 1 59783 0 VVAEYLNGAVR GVVIYVNSRPCCVPRVVAEYLNGAVREESI CVPRVVAEYLNGAVREESIHCKSVEEISTL R V V V R E 2 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 3 0 0 11 0 1189.6455 Q8N983 Q8N983 75 85 MRPL43 39S ribosomal protein L43, mitochondrial yes yes 2 0.0016763 137.46 By MS/MS 10 0 1 1 701250 701250 0 15747 1935 16686 40074 28278 28278 1 745360 0 VVAIVLHPFS AGGVGITCWILVCNKVVAIVLHPFS_____ LVCNKVVAIVLHPFS_______________ K V V F S - 1 0 0 0 0 0 0 0 1 1 1 0 0 1 1 1 0 0 0 3 0 0 10 0 1080.6332 O00258 O00258 165 174 WRB Tail-anchored protein insertion receptor WRB yes yes 2 0.0098231 119.57 By MS/MS 9 0 1 1 87679 87679 0 15748 84 16687 40075 28279 28279 1 50320 0 VVALSMSPVDDTFISGSLDK HDNKYIRYFPGHSKRVVALSMSPVDDTFIS MSPVDDTFISGSLDKTIRLWDLRSPNCQGL R V V D K T 1 0 0 3 0 0 0 1 0 1 2 1 1 1 1 4 1 0 0 3 0 0 20 0 2080.0398 Q6UXN9 Q6UXN9 110 129 WDR82 WD repeat-containing protein 82 yes yes 2 1.6898E-24 201.76 By MS/MS 8 0 1 1 358790 358790 0 15749 1733 16688 40076 28280 28280 1235 1 23669 0 VVANSKESYELR TKKYLKKNNLRDWLRVVANSKESYELRYFQ WLRVVANSKESYELRYFQINQDEEEEEDED R V V L R Y 1 1 1 0 0 0 2 0 0 0 1 1 0 0 0 2 0 0 1 2 0 0 12 1 1393.7201 P35268 P35268 102 113 RPL22 60S ribosomal protein L22 yes yes 2;3 0.00034859 196.11 By MS/MS 10 0 2 2 1592500 1592500 0 15750 788 16689 40077;40078 28281;28282 28282 2 1692700 0 VVAPTISSPVCQEQLVEAGR TQCALSTSQLVACTKVVAPTISSPVCQEQL ISSPVCQEQLVEAGRLVAKAVEGCVSASQA K V V G R L 2 1 0 0 1 2 2 1 0 1 1 0 0 0 2 2 1 0 0 4 0 0 20 0 2139.0994 Q9Y490 Q9Y490 722 741 TLN1 Talin-1 yes yes 2;3 3.0267E-05 146.2 By MS/MS 2.75 0.829 2 1 1 4 3746400 3746400 0 15751 2947 16690 40079;40080;40081;40082 28283;28284;28285 28283 3 150940 0 VVAQYAQR HSNPGDPALWSLLSRVVAQYAQRNAKGGVV LWSLLSRVVAQYAQRNAKGGVVAGNVAHIL R V V Q R N 2 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 8 0 933.50321 Q6PGP7 Q6PGP7 1202 1209 TTC37 Tetratricopeptide repeat protein 37 yes yes 2 0.0032542 148.07 By MS/MS 2.5 0.5 1 1 2 1295900 1295900 0 15752 1714 16691 40083;40084 28286 28286 1 35175 0 VVATAPGCGVIECIPDCTSR IFQLVGLDLFVFPYRVVATAPGCGVIECIP PGCGVIECIPDCTSRDQLGRQTDFGMYDYF R V V S R D 2 1 0 1 3 0 1 2 0 2 0 0 0 0 2 1 2 0 0 3 0 0 20 0 2160.9966 P42356;A4QPH2 P42356 1886 1905 PI4KA;PI4KAP2 Phosphatidylinositol 4-kinase alpha;Putative phosphatidylinositol 4-kinase alpha-like protein P2 yes no 2 0.0019029 93.243 By MS/MS 2.5 0.5 1 1 2 532820 532820 0 15753 850 16692 40085;40086 28287 28287 1 20032 0 VVAVAALR RPLQSTELCPGGGARVVAVAALRGRLVWCE CPGGGARVVAVAALRGRLVWCEERQARAEG R V V L R G 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 8 0 797.51232 Q86YV9 Q86YV9 128 135 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 2 0.021153 105.27 By MS/MS 5 0 1 1 412600 412600 0 15754 1850 16693 40087 28288 28288 1 16960 0 VVDALGNAIDGK GAIVDVPVGEELLGRVVDALGNAIDGKGPI LGRVVDALGNAIDGKGPIGSKTRRRVGLKA R V V G K G 2 0 1 2 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 2 0 0 12 0 1170.6245 P25705 P25705 150 161 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 6.5039E-05 194.48 By MS/MS By MS/MS 5.5 0.764 1 1 4 4 2 34902000 34586000 315840 15755 687 16694 40088;40089;40090;40091;40092;40093 28289;28290;28291 28290 3 305840 968660 VVDALGNAIDGKGPIGSK GAIVDVPVGEELLGRVVDALGNAIDGKGPI ALGNAIDGKGPIGSKTRRRVGLKAPGIIPR R V V S K T 2 0 1 2 0 0 0 4 0 2 1 2 0 0 1 1 0 0 0 2 0 0 18 1 1709.9312 P25705 P25705 150 167 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2;3 4.279E-13 205.3 By MS/MS By matching 7.08 1.71 1 1 3 2 2 2 1 11 1 316550000 316520000 31300 15756 687 16695 40094;40095;40096;40097;40098;40099;40100;40101;40102;40103;40104;40105 28292;28293 28292 2 3097500 95996 VVDDELATR QQRQLITVTMSSDSRVVDDELATRFLKSFK MSSDSRVVDDELATRFLKSFKANLENPIRL R V V T R F 1 1 0 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 9 0 1016.5138 O00330 O00330 477 485 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 2 0.0029845 120.12 By MS/MS 6 0 1 1 3319100 3319100 0 15757 89 16696 40106 28294 28294 1 25883 0 VVDFLLK SAEKEPEQPPALWRKVVDFLLKAIMRTMWF QPPALWRKVVDFLLKAIMRTMWFAGGFHRV K V V L K A 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 7 0 832.50584 Q8NF37 Q8NF37 94 100 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 2 0.023329 119.57 By MS/MS 6 0 1 1 1077300 1077300 0 15758 1967 16697 40107 28295 28295 1 8401.1 0 VVDLAPLHLDAR KALGYMERAAESYGKVVDLAPLHLDARISL YGKVVDLAPLHLDARISLSTLQQQLGQPEK K V V A R I 2 1 0 2 0 0 0 0 1 0 3 0 0 0 1 0 0 0 0 2 0 0 12 0 1317.7405 Q9Y5Q9 Q9Y5Q9 482 493 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 3 0.00096716 124.42 By MS/MS 4 0 1 1 995280 995280 0 15759 2978 16698 40108 28296 28296 1 27170 0 VVDLEGSLK AGKDGPSLLVVEQVRVVDLEGSLKVVYPSK VVEQVRVVDLEGSLKVVYPSKADLATAPPH R V V L K V 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 958.53351 Q8N1G4 Q8N1G4 555 563 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 2 0.017701 98.033 By MS/MS 5 0 1 1 1247900 1247900 0 15760 1901 16699 40109 28297 28297 1 51293 0 VVDLLAPYAK MEMSVEQEILVTGIKVVDLLAPYAKGGKIG VTGIKVVDLLAPYAKGGKIGLFGGAGVGKT K V V A K G 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 10 0 1087.6277 P06576 P06576 189 198 ATP5B ATP synthase subunit beta, mitochondrial yes yes 2 0.00024755 170.3 By MS/MS By MS/MS 6.4 1.02 1 2 1 1 4 1 179120000 178660000 459990 15761 478 16700 40110;40111;40112;40113;40114 28298;28299;28300;28301 28299 4 1852600 1410800 VVDLLAQDADIVCR TVVLGAQWGDEGKGKVVDLLAQDADIVCRC KVVDLLAQDADIVCRCQGGNNAGHTVVVDS K V V C R C 2 1 0 3 1 1 0 0 0 1 2 0 0 0 0 0 0 0 0 3 0 0 14 0 1585.8134 P30520 P30520 46 59 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 2 6.0012E-06 207.47 By MS/MS 6.5 0.5 1 1 2 10320000 10320000 0 15762 742 16701 40115;40116 28302;28303 28303 2 168970 0 VVDLLNQAALITNDSK QEEGPGIDGMTTSERVVDLLNQAALITNDS VDLLNQAALITNDSKITVLKQVQELIINKD R V V S K I 2 0 2 2 0 1 0 0 0 1 3 1 0 0 0 1 1 0 0 2 0 0 16 0 1712.9309 Q92797 Q92797 36 51 SYMPK Symplekin yes yes 2 4.6543E-06 180.3 By MS/MS 3 0 1 1 691670 691670 0 15763 2081 16702 40117 28304 28304 1 18056 0 VVDLMAHMASKE KLISWYDNEFGYSNRVVDLMAHMASKE___ SNRVVDLMAHMASKE_______________ R V V K E - 2 0 0 1 0 0 1 0 1 0 1 1 2 0 0 1 0 0 0 2 0 0 12 1 1329.6421 P04406 P04406 324 335 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2;3 0.0062915 126.19 By MS/MS 7.5 0.5 2 2 4 4320900 4320900 0 15764 452 16703;16704 40118;40119;40120;40121 28305;28306 28306 2 92447 0 VVDNASQGEGVR SWAALASWAYRWGRKVVDNASQGEGVRLLP GRKVVDNASQGEGVRLLPREKSEVQNLLPD K V V V R L 1 1 1 1 0 1 1 2 0 0 0 0 0 0 0 1 0 0 0 3 0 0 12 0 1229.6 Q96Q15 Q96Q15 1633 1644 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 5.7654E-05 164.33 By MS/MS 1.5 0.5 1 1 2 221740 221740 0 15765 2241 16705 40122;40123 28307 28307 1 10901 0 VVDNSALGNSPYHR TTGSLSAIQKMTRVRVVDNSALGNSPYHRA RVVDNSALGNSPYHRAPRCIHVYKKNGVGK R V V H R A 1 1 2 1 0 0 0 1 1 0 1 0 0 0 1 2 0 0 1 2 0 0 14 0 1527.743 Q6P1L8 Q6P1L8 40 53 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 2 0.00014169 142.76 By MS/MS 10 0 1 1 275730 275730 0 15766 1700 16706 40124 28308 28308 1 293070 0 VVDPTPEQFQAFR YKGKWHGDVAVKILKVVDPTPEQFQAFRNE LKVVDPTPEQFQAFRNEVAVLRKTRHVNIL K V V F R N 1 1 0 1 0 2 1 0 0 0 0 0 0 2 2 0 1 0 0 2 0 0 13 0 1532.7623 P04049 P04049 379 391 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 2 0.00025419 145.91 By MS/MS 5 0 1 1 1240400 1240400 0 15767 442 16707 40125 28309 28309 1 50987 0 VVDQLHQELMQK V V Q K 0 0 0 1 0 3 1 0 1 0 2 1 1 0 0 0 0 0 0 2 0 0 12 0 1466.7551 REV__P40763 yes yes 2 0.0035667 105.1 By MS/MS 6 0 2 2 2678900 2678900 0 + 15768 3023 16708 40126;40127 28310 28310 1742 1 20891 0 VVDRDSEEAEIIR DPIDVNYEKLKTDIKVVDRDSEEAEIIRKY IKVVDRDSEEAEIIRKYVKNTHATTHNAYD K V V I R K 1 2 0 2 0 0 3 0 0 2 0 0 0 0 0 1 0 0 0 2 0 0 13 1 1529.7686 P09874 P09874 803 815 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.0050264 126.1 By MS/MS By matching 3.75 0.433 1 3 3 1 10510000 10463000 46824 15769 521 16709 40128;40129;40130;40131 28311;28312 28311 2 285380 97841 VVDRDSEEAEIIRK DPIDVNYEKLKTDIKVVDRDSEEAEIIRKY KVVDRDSEEAEIIRKYVKNTHATTHNAYDL K V V R K Y 1 2 0 2 0 0 3 0 0 2 0 1 0 0 0 1 0 0 0 2 0 0 14 2 1657.8635 P09874 P09874 803 816 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.010274 100.11 By MS/MS By matching 5.43 1.5 3 1 1 1 1 6 1 11572000 11493000 79472 15770 521 16710 40132;40133;40134;40135;40136;40137;40138 28313;28314 28313 2 315310 166060 VVDSLYNK KTYEAALETIQNMSKVVDSLYNKAKKLT__ TIQNMSKVVDSLYNKAKKLT__________ K V V N K A 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 8 0 936.49165 O00231 O00231 410 417 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 2 0.0032576 148.04 By MS/MS By matching 7 0 2 1 1 12784000 12752000 32270 15771 80 16711 40139;40140 28315 28315 1 227880 132480 VVDVLDSIK GIFLKVGSAKPGLQKVVDVLDSIKTKGKSA KPGLQKVVDVLDSIKTKGKSADFTNFDPRG K V V I K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 3 0 0 9 0 986.56481 P00918 P00918 159 167 CA2 Carbonic anhydrase 2 yes yes 2 0.0098655 105.1 By MS/MS 7.5 0.5 1 1 2 1206100 1206100 0 15772 434 16712 40141;40142 28316 28316 1 54198 0 VVEDIEYLK EVLQYSAREAQDSKKVVEDIEYLKFDKGPW AQDSKKVVEDIEYLKFDKGPWLKQDNRTLY K V V L K F 0 0 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 0 1 2 0 0 9 0 1106.5859 O95299 O95299 269 277 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 2 0.0043972 117.04 By MS/MS 7 0.816 1 1 1 3 3737900 3737900 0 15773 384 16713 40143;40144;40145 28317;28318 28317 2 138390 0 VVEEIKK RLFVEESIHDEFVTRVVEEIKKMKIGDPLD IHDEFVTRVVEEIKKMKIGDPLDRSTDHGP R V V K K M 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 2 0 0 7 1 843.50657 Q3SY69 Q3SY69 748 754 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 2 0.031962 160.03 By MS/MS 4 0 1 1 1715500 1715500 0 15774 1570 16714 40146 28319 28319 1 46831 0 VVEGFTDEEK GGYSADHPVIKVFWRVVEGFTDEEKRKLLK KVFWRVVEGFTDEEKRKLLKFVTSCSRPPL R V V E K R 0 0 0 1 0 0 3 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1151.5346 Q15386 Q15386 999 1008 UBE3C Ubiquitin-protein ligase E3C yes yes 2 0.0010678 120.31 By MS/MS 3.5 0.5 1 1 2 822090 822090 0 15775 1494 16715 40147;40148 28320 28320 1 22376 0 VVEGTPLIDGR WFLIQVLFYLLPIGKVVEGTPLIDGRRLKY PIGKVVEGTPLIDGRRLKYRLNGFYAFILT K V V G R R 0 1 0 1 0 0 1 2 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1154.6295 Q14739 Q14739 280 290 LBR Lamin-B receptor yes yes 2 9.3051E-05 162.88 By MS/MS 1.5 0.5 1 1 2 1164600 1164600 0 15776 1445 16716 40149;40150 28321 28321 1 57178 0 VVEHNIR STEEGEKRWKDLKNRVVEHNIRIMAKYYTR RWKDLKNRVVEHNIRIMAKYYTRITMKRMA R V V I R I 0 1 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 865.477 O00232 O00232 358 364 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 2 0.019207 128.57 By MS/MS By matching 6 0 2 1 1 9442100 9433700 8343.1 15777 81 16717 40151;40152 28322 28322 1 73564 25588 VVEIAPAAHLDPQLR HLYERDCSIQRRHQKVVEIAPAAHLDPQLR VVEIAPAAHLDPQLRTRLTSDSVKLAKQVG K V V L R T 3 1 0 1 0 1 1 0 1 1 2 0 0 0 2 0 0 0 0 2 0 0 15 0 1627.9046 P11498 P11498 274 288 PC Pyruvate carboxylase, mitochondrial yes yes 2;3 0.012363 96.82 By MS/MS 3.5 0.5 2 2 4 8172700 8172700 0 15778 555 16718 40153;40154;40155;40156 28323;28324 28324 2 222350 0 VVEIVDEK TTDISLIFAALKDSKVVEIVDEKVRRREEP AALKDSKVVEIVDEKVRRREEPEKWPLPPI K V V E K V 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 3 0 0 8 0 929.50696 Q6PKG0 Q6PKG0 466 473 LARP1 La-related protein 1 yes yes 2 0.015988 111.95 By MS/MS 3 0 1 1 1203100 1203100 0 15779 1719 16719 40157 28325 28325 1 31408 0 VVEKADSWVEKEEPAPSN ELRRRLTPLQLEIQRVVEKADSWVEKEEPA KADSWVEKEEPAPSN_______________ R V V S N - 2 0 1 1 0 0 4 0 0 0 0 2 0 0 2 2 0 1 0 3 0 0 18 2 2012.9691 Q8N163 Q8N163 906 923 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 3 0.012951 75.91 By MS/MS 3 0 1 1 1045300 1045300 0 15780 1895 16720 40158 28326 28326 1 27289 0 VVEKEAETER ESEKTKLLIAAQKQKVVEKEAETERKKALI AQKQKVVEKEAETERKKALIEAEKVAQVAE K V V E R K 1 1 0 0 0 0 4 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 10 1 1188.5986 O75477;O94905 O94905 202 211 ERLIN1;ERLIN2 Erlin-1;Erlin-2 no no 2 0.039315 106.4 By MS/MS By matching 7 0 2 1 1 641450 625760 15687 15781 357;312 16721 40159;40160 28327 28327 1 11183 64396 VVENEIYSESHR VFSMGNNSYGQCGRKVVENEIYSESHRVHR GRKVVENEIYSESHRVHRMQDFDGQVVQVA K V V H R V 0 1 1 0 0 0 3 0 1 1 0 0 0 0 0 2 0 0 1 2 0 0 12 0 1460.6896 Q96I51 Q96I51 210 221 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes yes 2 0.008744 98.407 By MS/MS 7 0 1 1 471510 471510 0 15782 2199 16722 40161 28328 28328 1 8425.9 0 VVFAVSDLEEGTYQK TVRRFLEIHGETIEKVVFAVSDLEEGTYQK VVFAVSDLEEGTYQKLLPLYFPRSLKEENR K V V Q K L 1 0 0 1 0 1 2 1 0 0 1 1 0 1 0 1 1 0 1 3 0 0 15 0 1683.8356 Q9NXN4 Q9NXN4 203 217 GDAP2 Ganglioside-induced differentiation-associated protein 2 yes yes 2 2.1496E-38 262 By MS/MS 6 0 1 1 2921800 2921800 0 15783 2690 16723 40162 28329;28330 28329 2 22785 0 VVFPSGEVVEQK DARRWVRALRRSPVKVVFPSGEVVEQKRAP PVKVVFPSGEVVEQKRAPGKQPRKAPSEAS K V V Q K R 0 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 4 0 0 12 0 1316.6976 Q9HC36 Q9HC36 40 51 RNMTL1 rRNA methyltransferase 3, mitochondrial yes yes 2 0.003572 121.9 By MS/MS By MS/MS 6 0 2 1 1 7111700 7022700 88981 15784 2558 16724 40163;40164 28331;28332 28332 2 54764 272900 VVFQEFR VLEGIRICRQGFPNRVVFQEFRQRYEILTP CRQGFPNRVVFQEFRQRYEILTPNSIPKGF R V V F R Q 0 1 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 7 0 923.4865 P35579 P35579 712 718 MYH9 Myosin-9 yes yes 2 0.053886 100.19 By MS/MS 2.5 0.5 1 1 2 739720 739720 0 15785 793 16725 40165;40166 28333 28333 1 32951 0 VVFSTGPQSTK AGYFDIYFEKNCHNRVVFSTGPQSTKTHWK CHNRVVFSTGPQSTKTHWKQTVFLLEKPFS R V V T K T 0 0 0 0 0 1 0 1 0 0 0 1 0 1 1 2 2 0 0 2 0 0 11 0 1149.603 O60678 O60678 467 477 PRMT3 Protein arginine N-methyltransferase 3 yes yes 2 0.016796 92.239 By MS/MS 5.5 0.5 1 1 2 4069500 4069500 0 15786 257 16726 40167;40168 28334 28334 1 78810 0 VVFVFGPDK DPAEKDEKGMPVTARVVFVFGPDKKLKLSI MPVTARVVFVFGPDKKLKLSILYPATTGRN R V V D K K 0 0 0 1 0 0 0 1 0 0 0 1 0 2 1 0 0 0 0 3 0 0 9 0 1006.5488 P30041 P30041 133 141 PRDX6 Peroxiredoxin-6 yes yes 2 0.043833 83.265 By MS/MS 8 0 1 1 314760 314760 0 15787 729 16727 40169 28335 28335 1 20765 0 VVGAFPMAK ______________________________ ______________________________ M V V A K L 2 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 2 0 0 9 0 918.49971 Q9H6K4 Q9H6K4 2 10 OPA3 Optic atrophy 3 protein yes yes 2 0.015032 95.62 By MS/MS 9.5 0.5 1 1 2 804940 804940 0 15788 2510 16728 40170;40171 28336 28336 1526 1 507140 0 VVGAMQLYSVDR QKWLLLTGISAQQNRVVGAMQLYSVDRKVS QNRVVGAMQLYSVDRKVSQPIEGHAASFAQ R V V D R K 1 1 0 1 0 1 0 1 0 0 1 0 1 0 0 1 0 0 1 3 0 0 12 0 1336.6809 Q00610;P53675 Q00610 177 188 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.00062513 134.3 By MS/MS 2 0.816 1 1 1 3 1429000 1429000 0 15789 1235 16729 40172;40173;40174 28337;28338;28339 28338 1008 2 51597 0 VVGAYNQCPVVR DRASLTRCRLGDVVRVVGAYNQCPVVRFIC VVRVVGAYNQCPVVRFICRLDQTLSVRGED R V V V R F 1 1 1 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 4 0 0 12 0 1360.6922 Q8N2G8 Q8N2G8 370 381 GHDC GH3 domain-containing protein yes yes 2 8.5575E-13 214.23 By MS/MS 6 0 1 1 6380900 6380900 0 15790 1905 16730 40175 28340 28340 1 49758 0 VVGDVAYDEAK GINYVPDDKKPNGRKVVGDVAYDEAKERAS NGRKVVGDVAYDEAKERASFITPVPGGVGP K V V A K E 2 0 0 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 11 0 1164.5663 P11586 P11586 252 262 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 0.00019719 155.06 By MS/MS 4 0 1 1 1650300 1650300 0 15791 556 16731 40176 28341 28341 1 45050 0 VVGDVAYDEAKER GINYVPDDKKPNGRKVVGDVAYDEAKERAS RKVVGDVAYDEAKERASFITPVPGGVGPMT K V V E R A 2 1 0 2 0 0 2 1 0 0 0 1 0 0 0 0 0 0 1 3 0 0 13 1 1449.71 P11586 P11586 252 264 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2;3 0.00045844 171.67 By MS/MS 4 0 2 2 8643000 8643000 0 15792 556 16732 40177;40178 28342;28343 28342 2 235940 0 VVGESLSPAFHLQLEESTGSR CGQIHKALQGISGLKVVGESLSPAFHLQLE SPAFHLQLEESTGSREQDVRLLQEIVDQCM K V V S R E 1 1 0 0 0 1 3 2 1 0 3 0 0 1 1 4 1 0 0 2 0 0 21 0 2242.123 O15269 O15269 385 405 SPTLC1 Serine palmitoyltransferase 1 yes yes 3 0.0027927 77.899 By MS/MS 6 0 1 1 8405600 8405600 0 15793 165 16733 40179 28344;28345 28345 2 65547 0 VVGNPCPICR VPPQRTRKTCIRRNKVVGNPCPICRDHKLH IRRNKVVGNPCPICRDHKLHVDFRNVKLLE K V V C R D 0 1 1 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 2 0 0 10 0 1170.5638 Q9Y676 Q9Y676 100 109 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 7.7053E-05 168.23 By MS/MS 8.5 0.5 1 1 2 7109300 7109300 0 15794 2995 16734 40180;40181 28346 28346 1 610660 0 VVGPQQLHSETNER DINDDEFLHLPAHLRVVGPQQLHSETNERL RVVGPQQLHSETNERLFDEKYKPVVLTDDQ R V V E R L 0 1 1 0 0 2 2 1 1 0 1 0 0 0 1 1 1 0 0 2 0 0 14 0 1592.7907 Q9BSF4 Q9BSF4 198 211 C19orf52 Uncharacterized protein C19orf52 yes yes 2 3.9683E-08 187.78 By MS/MS 8 0 1 1 827180 827180 0 15795 2336 16735 40182 28347;28348 28347 2 54569 0 VVGQLDPQR RVPLIGSLPEARLRRVVGQLDPQRLWSTYL EARLRRVVGQLDPQRLWSTYLRPLLVVRTP R V V Q R L 0 1 0 1 0 2 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 0 9 0 1010.5509 Q9NXS2 Q9NXS2 84 92 QPCTL Glutaminyl-peptide cyclotransferase-like protein yes yes 2 0.0098225 107.69 By MS/MS 7 0 1 1 2264300 2264300 0 15796 2692 16736 40183 28349 28349 1 40463 0 VVGSEFVQK LAKAVAHHTTAAFIRVVGSEFVQKYLGEGP TAAFIRVVGSEFVQKYLGEGPRMVRDVFRL R V V Q K Y 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 0 0 0 3 0 0 9 0 991.53385 P43686 P43686 230 238 PSMC4 26S protease regulatory subunit 6B yes yes 2 8.5955E-05 171.53 By MS/MS 6 0 1 1 18342000 18342000 0 15797 867 16737 40184 28350 28350 1 143030 0 VVGSELIQK LAKAVANQTSATFLRVVGSELIQKYLGDGP SATFLRVVGSELIQKYLGDGPKLVRELFRV R V V Q K Y 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 9 0 971.56515 P62191 P62191 250 258 PSMC1 26S protease regulatory subunit 4 yes yes 2 8.5955E-05 171.53 By MS/MS By matching 6 0 2 1 1 28364000 28300000 63877 15798 1116 16738 40185;40186 28351 28351 1 220680 195900 VVGVFTVPDKDGK FGQEVYSHLRKEGHRVVGVFTVPDKDGKAD HRVVGVFTVPDKDGKADPLALAAEKDGTPV R V V G K A 0 0 0 2 0 0 0 2 0 0 0 2 0 1 1 0 1 0 0 4 0 0 13 1 1359.7398 Q3SY69 Q3SY69 48 60 ALDH1L2 Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes yes 2 0.0054712 134.57 By MS/MS 4 0 1 1 976010 976010 0 15799 1570 16739 40187 28352 28352 1 26644 0 VVHQNHGER PVGGHILSYLLEKSRVVHQNHGERNFHIFY LLEKSRVVHQNHGERNFHIFYQLLEGGEEE R V V E R N 0 1 1 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 2 0 0 9 0 1074.5319 O00159 O00159 227 235 MYO1C Unconventional myosin-Ic yes yes 2;3 0.0026993 122.28 By MS/MS 4 0 2 2 1284800 1284800 0 15800 72 16740 40188;40189 28353;28354 28353 2 35073 0 VVHSYEELEENYTR IIFKAAYGGGGRGMRVVHSYEELEENYTRA RVVHSYEELEENYTRAYSEALAAFGNGALF R V V T R A 0 1 1 0 0 0 4 0 1 0 1 0 0 0 0 1 1 0 2 2 0 0 14 0 1766.8111 P11498 P11498 206 219 PC Pyruvate carboxylase, mitochondrial yes yes 2;3 2.4779E-12 228.93 By MS/MS 3.8 0.748 2 2 1 5 6516400 6516400 0 15801 555 16741 40190;40191;40192;40193;40194 28355;28356 28356 2 178740 0 VVIDAFR AVAVVVDPIQSVKGKVVIDAFRLINANMMV PIQSVKGKVVIDAFRLINANMMVLGHEPRQ K V V F R L 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 7 0 818.46504 O00487 O00487 155 161 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 2 0.040889 107.43 By MS/MS 8.5 1.12 1 1 1 1 4 5469100 5469100 0 15802 100 16742 40195;40196;40197;40198 28357 28357 1 1790100 0 VVIFDPSWNPATDAQAVDR TQVGGVGLTLTAATRVVIFDPSWNPATDAQ DPSWNPATDAQAVDRVYRIGQKENVVVYRL R V V D R V 3 1 1 3 0 1 0 0 0 1 0 0 0 1 2 1 1 1 0 3 0 0 19 0 2100.0276 Q2NKX8 Q2NKX8 551 569 ERCC6L DNA excision repair protein ERCC-6-like yes yes 2 3.1686E-07 140.49 By MS/MS 3.5 0.5 1 1 2 355890 355890 0 15803 1559 16743 40199;40200 28358 28358 1 9340.2 0 VVIQEMLK YHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ DAGNSDRVVIQEMLKTVAQSQQLETNSQRD R V V L K T 0 0 0 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 0 2 0 0 8 0 958.55214 P40938 P40938 106 113 RFC3 Replication factor C subunit 3 yes yes 2 0.044828 93.374 By MS/MS 7 0 1 1 631560 631560 0 15804 834 16744 40201 28359 28359 1 11286 0 VVIQSNDDIASR MMDDLELIGLDYLWRVVIQSNDDIASRAID LWRVVIQSNDDIASRAIDLLKEIYTNLGPR R V V S R A 1 1 1 2 0 1 0 0 0 2 0 0 0 0 0 2 0 0 0 2 0 0 12 0 1315.6732 Q93008 Q93008 777 788 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 4.2728E-07 182.92 By MS/MS 2.5 1.12 1 1 1 1 4 14261000 14261000 0 15805 2096 16745 40202;40203;40204;40205 28360;28361;28362;28363;28364 28363 4 586650 0 VVKDLSSEELAAFQK VVRSIIGSARSLGIRVVKDLSSEELAAFQK VVKDLSSEELAAFQKERAIFLAAQKEADLA R V V Q K E 2 0 0 1 0 1 2 0 0 0 2 2 0 1 0 2 0 0 0 2 0 0 15 1 1662.8829 Q9Y3B7 Q9Y3B7 155 169 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 2;3 1.6335E-05 164.92 By MS/MS 9 0 2 2 1993600 1993600 0 15806 2927 16746 40206;40207 28365;28366 28365 2 1144100 0 VVLASQPDLECGFSR LCHGLSDLARVPSPKVVLASQPDLECGFSR VVLASQPDLECGFSRDLFIQWCQDPKNSII K V V S R D 1 1 0 1 1 1 1 1 0 0 2 0 0 1 1 2 0 0 0 2 0 0 15 0 1676.8192 Q9P2I0 Q9P2I0 325 339 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 2 0.0050466 121.56 By MS/MS 4.5 0.5 1 1 2 843030 843030 0 15807 2737 16747 40208;40209 28367 28367 1 26828 0 VVLEAPLITESALEVVR GLQEKPDQKDGIFTKVVLEAPLITESALEV LEAPLITESALEVVRKYCEDESRTYLGMST K V V V R K 2 1 0 0 0 0 3 0 0 1 3 0 0 0 1 1 1 0 0 4 0 0 17 0 1837.0561 Q92797 Q92797 667 683 SYMPK Symplekin yes yes 2 0.022266 77.894 By MS/MS 3 0 1 1 70350 70350 0 15808 2081 16748 40210 28368 28368 1 1836.5 0 VVLEGPAPWGFR ______________________________ SFKVVLEGPAPWGFRLQGGKDFNVPLSISR K V V F R L 1 1 0 0 0 0 1 2 0 0 1 0 0 1 2 0 0 1 0 2 0 0 12 0 1326.7085 Q9NR12 Q9NR12 6 17 PDLIM7 PDZ and LIM domain protein 7 yes yes 2 0.015482 90.906 By MS/MS 6 0 1 1 2065400 2065400 0 15809 2597 16749 40211 28369 28369 1 16106 0 VVLEHEEVR KTTNPSKYIRFIYNRVVLEHEEVRAGAVSA RFIYNRVVLEHEEVRAGAVSALAKFGAQNE R V V V R A 0 1 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 1108.5877 Q9Y678 Q9Y678 480 488 COPG1 Coatomer subunit gamma-1 yes yes 2 0.00011483 167.23 By MS/MS 4.5 0.5 1 1 2 2874800 2874800 0 15810 2996 16750 40212;40213 28370 28370 1 84086 0 VVLEHEEVRAGAVSALAK KTTNPSKYIRFIYNRVVLEHEEVRAGAVSA EHEEVRAGAVSALAKFGAQNEEMLPSILVL R V V A K F 4 1 0 0 0 0 3 1 1 0 2 1 0 0 0 1 0 0 0 4 0 0 18 1 1877.0371 Q9Y678 Q9Y678 480 497 COPG1 Coatomer subunit gamma-1 yes yes 3 0.0086533 75.877 By MS/MS 4 0 1 1 1407200 1407200 0 15811 2996 16751 40214 28371 28371 1 38415 0 VVLELKADVVPK LVYLDVDANGKPLGRVVLELKADVVPKTAE LGRVVLELKADVVPKTAENFRALCTGEKGF R V V P K T 1 0 0 1 0 0 1 0 0 0 2 2 0 0 1 0 0 0 0 4 0 0 12 1 1308.8017 P30405 P30405 62 73 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 2 0.04478 101.39 By MS/MS 9.5 0.5 1 1 2 351170 351170 0 15812 740 16752 40215;40216 28372 28372 1 286370 0 VVLENEAVR RTPVPSKYIRFIFNRVVLENEAVRAAAVSA RFIFNRVVLENEAVRAAAVSALAKFGAQNE R V V V R A 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 1027.5662 Q9UBF2 Q9UBF2 480 488 COPG2 Coatomer subunit gamma-2 yes yes 2 0.00092964 143.7 By MS/MS 5 0.816 1 1 1 3 18802000 18802000 0 15813 2748 16753 40217;40218;40219 28373;28374 28374 2 687350 0 VVLGEFGVR ______________________________ EEMRSRVVLGEFGVRNVHTTDFPGNYSGYD R V V V R N 0 1 0 0 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 3 0 0 9 0 974.55492 O15160 O15160 14 22 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 2 0.0024484 124.98 By MS/MS 8.5 1.12 1 1 1 1 4 7239900 7239900 0 15814 155 16754 40220;40221;40222;40223 28375 28375 1 449270 0 VVLIGDSGVGK ______________________________ YLFKVVLIGDSGVGKSNLLSRFTRNEFNLE K V V G K S 0 0 0 1 0 0 0 3 0 1 1 1 0 0 0 1 0 0 0 3 0 0 11 0 1042.6023 P62491;Q15907 P62491 14 24 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0056026 114.97 By MS/MS 9 0 1 1 1797200 1797200 0 15815 1136 16755 40224 28376 28376 1 1031400 0 VVLIGGKPDR TIKLFQECCPHSTDRVVLIGGKPDRVVECI HSTDRVVLIGGKPDRVVECIKIILDLISES R V V D R V 0 1 0 1 0 0 0 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 10 1 1052.6342 P61978 P61978 192 201 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 3 0.014746 83.783 By MS/MS 6 0 1 1 2860000 2860000 0 15816 1110 16756 40225 28377 28377 1 22302 0 VVLIVGETGSGK FEKQEEIVKIIKENKVVLIVGETGSGKTTQ ENKVVLIVGETGSGKTTQIPQFLLDDCFKN K V V G K T 0 0 0 0 0 0 1 3 0 1 1 1 0 0 0 1 1 0 0 3 0 0 12 0 1157.6656 Q9H6S0 Q9H6S0 211 222 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.0030103 142 By MS/MS 3 0 1 1 1159400 1159400 0 15817 2511 16757 40226 28378 28378 1 30267 0 VVLLFQEK YLSSWFEDVVCPIQRVVLLFQEKLTFLLHA VVCPIQRVVLLFQEKLTFLLHAALSYTPVE R V V E K L 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 8 0 974.58007 Q9HAS0 Q9HAS0 209 216 C17orf75 Protein Njmu-R1 yes yes 2 0.0090006 122.18 By MS/MS 7 0 1 1 1201200 1201200 0 15818 2543 16758 40227 28379 28379 1 21465 0 VVLLGAPNAGK LVHHPDMPENSRVLRVVLLGAPNAGKSTLS RVLRVVLLGAPNAGKSTLSNQLLGRKVFPV R V V G K S 2 0 1 0 0 0 0 2 0 0 2 1 0 0 1 0 0 0 0 2 0 0 11 0 1037.6233 O75616 O75616 116 126 ERAL1 GTPase Era, mitochondrial yes yes 2 0.0035767 113.71 By MS/MS By matching 8.2 1.17 2 1 1 1 4 1 25107000 25037000 69961 15819 321 16759 40228;40229;40230;40231;40232 28380 28380 1 764320 287200 VVLLGEGCVGK GGGGAAAAGRAYSFKVVLLGEGCVGKTSLV YSFKVVLLGEGCVGKTSLVLRYCENKFNDK K V V G K T 0 0 0 0 1 0 1 3 0 0 2 1 0 0 0 0 0 0 0 3 0 0 11 0 1129.6165 Q9UL25 Q9UL25 22 32 RAB21 Ras-related protein Rab-21 yes yes 2 1.0377E-06 177.3 By MS/MS 9 0 1 1 769700 769700 0 15820 2819 16760 40233 28381 28381 1 441740 0 VVLLHGPPGTGK FSDKNVNSNLITWNRVVLLHGPPGTGKTSL WNRVVLLHGPPGTGKTSLCKALAQKLTIRL R V V G K T 0 0 0 0 0 0 0 3 1 0 2 1 0 0 2 0 1 0 0 2 0 0 12 0 1173.687 Q15645 Q15645 174 185 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 3 0.03068 72.531 By MS/MS 7 0 1 1 1662600 1662600 0 15821 1512 16761 40234 28382 28382 1 29711 0 VVLLTEVDK AQSQQLETNSQRDFKVVLLTEVDKLTKDAQ SQRDFKVVLLTEVDKLTKDAQHALRRTMEK K V V D K L 0 0 0 1 0 0 1 0 0 0 2 1 0 0 0 0 1 0 0 3 0 0 9 0 1014.5961 P40938 P40938 131 139 RFC3 Replication factor C subunit 3 yes yes 2 0.033777 88.948 By MS/MS 7 0 1 1 1194900 1194900 0 15822 834 16762 40235 28383 28383 1 21353 0 VVLLTEVDKLTK AQSQQLETNSQRDFKVVLLTEVDKLTKDAQ DFKVVLLTEVDKLTKDAQHALRRTMEKYMS K V V T K D 0 0 0 1 0 0 1 0 0 0 3 2 0 0 0 0 2 0 0 3 0 0 12 1 1356.8228 P40938 P40938 131 142 RFC3 Replication factor C subunit 3 yes yes 2 0.00027407 190.57 By MS/MS 7.5 0.5 1 1 2 3127600 3127600 0 15823 834 16763 40236;40237 28384 28384 1 61657 0 VVLLTGETSTDLK YMDWYEKFQDRLNKKVVLLTGETSTDLKLL KKVVLLTGETSTDLKLLGKGNIIISTPEKW K V V L K L 0 0 0 1 0 0 1 1 0 0 3 1 0 0 0 1 3 0 0 2 0 0 13 0 1374.7606 O75643 O75643 1405 1417 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.7878E-17 215.83 By MS/MS 2 0.816 1 1 1 3 2295900 2295900 0 15824 322 16764 40238;40239;40240 28385;28386;28387;28388 28386 4 103690 0 VVLPTFILEPR WTLLKQVRPGMDLSKVVLPTFILEPRSFLD DLSKVVLPTFILEPRSFLDKLSDYYYHADF K V V P R S 0 1 0 0 0 0 1 0 0 1 2 0 0 1 2 0 1 0 0 2 0 0 11 0 1282.7649 Q9BZF1 Q9BZF1 423 433 OSBPL8 Oxysterol-binding protein-related protein 8 yes yes 2 0.026092 83.862 By MS/MS 4.5 0.5 1 1 2 665880 665880 0 15825 2421 16765 40241;40242 28389;28390 28389 2 18873 0 VVLPTFILER MHLLSQVRLGMDLTKVVLPTFILERRSLLE MDLTKVVLPTFILERRSLLEMYADFFAHPD K V V E R R 0 1 0 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 0 2 0 0 10 0 1185.7121 Q96SU4 Q96SU4 391 400 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 2 0.027849 86.898 By MS/MS 5 0.816 1 1 1 3 959270 959270 0 15826 2257 16766 40243;40244;40245 28391;28392 28391 2 23953 0 VVLPYLVPK FALDGLKQVMAIKSRVVLPYLVPKLTTPPV MAIKSRVVLPYLVPKLTTPPVNTRVLAFLS R V V P K L 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 0 0 0 1 3 0 0 9 0 1026.6478 Q92616 Q92616 2075 2083 GCN1L1 Translational activator GCN1 yes yes 2 0.012077 101.21 By MS/MS 3.5 1.12 1 1 1 1 4 2060000 2060000 0 15827 2068 16767 40246;40247;40248;40249 28393;28394 28394 2 83012 0 VVLSSQDKDK IIRFPDTVKQMNKYKVVLSSQDKDKSLVTV MNKYKVVLSSQDKDKSLVTVETDAHGSFCF K V V D K S 0 0 0 2 0 1 0 0 0 0 1 2 0 0 0 2 0 0 0 2 0 0 10 1 1117.5979 Q15155;P69849;Q5JPE7 Q15155 431 440 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 yes no 2 0.032358 109.48 By MS/MS 1 0 1 1 103200 103200 0 15828 1190 16768 40250 28395 28395 1 5042 0 VVLVLAGR ______________________________ KFMKPGKVVLVLAGRYSGRKAVIVKNIDDG K V V G R Y 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 3 0 0 8 0 825.54362 P61353 P61353 10 17 RPL27 60S ribosomal protein L27 yes yes 2 0.011647 117.56 By MS/MS By matching 9.67 0.471 1 2 2 1 1473000 1422300 50708 15829 1098 16769 40251;40252;40253 28396;28397 28397 2 1385600 1300600 VVLVNNILQNAQER DLDPYVKKLLNARRRVVLVNNILQNAQERL RVVLVNNILQNAQERLRRLNHSVAKETARR R V V E R L 1 1 3 0 0 2 1 0 0 1 2 0 0 0 0 0 0 0 0 3 0 0 14 0 1608.8948 O95295 O95295 92 105 SNAPIN SNARE-associated protein Snapin yes yes 2 6.4055E-18 218.75 By MS/MS 10 0 1 1 408250 408250 0 15830 382 16770 40254 28398 28398 1 433930 0 VVMALGDYMGASCHACIGGTNVR LVLAPTRELAQQIQKVVMALGDYMGASCHA MGASCHACIGGTNVRAEVQKLQMEAPHIIV K V V V R A 3 1 1 1 2 0 0 4 1 1 1 0 2 0 0 1 1 0 1 3 0 0 23 0 2438.0963 P60842 P60842 119 141 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 2;3 4.3134E-11 152.07 By MS/MS 5.6 2.06 1 1 1 1 7 2 1 1 15 329700000 329700000 0 15831 1074 16771;16772;16773 40255;40256;40257;40258;40259;40260;40261;40262;40263;40264;40265;40266;40267;40268;40269 28399;28400;28401;28402;28403;28404;28405;28406;28407;28408;28409;28410 28407 850;851 12 3129700 0 VVNEINIEDLCLTK KDSLINLKIQKENPKVVNEINIEDLCLTKA KVVNEINIEDLCLTKAAYCRCWRSKTFPAC K V V T K A 0 0 2 1 1 0 2 0 0 2 2 1 0 0 0 0 1 0 0 2 0 0 14 0 1658.8549 Q8N5K1 Q8N5K1 82 95 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 2 7.856E-18 243.37 By MS/MS 10 0 1 1 2454300 2454300 0 15832 1921 16774 40270 28411 28411 1 2608600 0 VVNGPEILNK LARQIGKMLNAREPKVVNGPEILNKYVGES AREPKVVNGPEILNKYVGESEANIRKLFAD K V V N K Y 0 0 2 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 2 0 0 10 0 1081.6132 P46459 P46459 284 293 NSF Vesicle-fusing ATPase yes yes 2 0.0051751 106.88 By MS/MS 5.5 0.5 1 1 2 6825500 6825500 0 15833 881 16775 40271;40272 28412 28412 1 238300 0 VVNQLAAAYEQDLLPGGCTLR VHYGARSIKHEVERRVVNQLAAAYEQDLLP AAYEQDLLPGGCTLRITVEDSDKQLLKSPE R V V L R I 3 1 1 1 1 2 1 2 0 0 4 0 0 0 1 0 1 0 1 2 0 0 21 0 2287.1631 Q9H078 Q9H078 630 650 CLPB Caseinolytic peptidase B protein homolog yes yes 2;3 0.0013927 88.768 By MS/MS 6 0 2 2 28859000 28859000 0 15834 2448 16776 40273;40274 28413;28414 28413 2 225040 0 VVNSCHR TEPLIQTAKTTLGSKVVNSCHRQMAEIAVN AKTTLGSKVVNSCHRQMAEIAVNAVLTVAD K V V H R Q 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 2 0 0 7 0 870.41302 P48643 P48643 177 183 CCT5 T-complex protein 1 subunit epsilon yes yes 2 0.011388 150.17 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 40956000 40956000 0 15835 909 16777 40275;40276;40277;40278;40279;40280;40281;40282 28415;28416 28415 2 351900 0 VVPGYGHAVLR EKLRDYIWNTLNSGRVVPGYGHAVLRKTDP NSGRVVPGYGHAVLRKTDPRYTCQREFALK R V V L R K 1 1 0 0 0 0 0 2 1 0 1 0 0 0 1 0 0 0 1 3 0 0 11 0 1166.656 O75390 O75390 341 351 CS Citrate synthase, mitochondrial yes yes 2 0.0022462 119.29 By MS/MS 7.5 0.5 1 1 2 5464200 5464200 0 15836 302 16778 40283;40284 28417 28417 1 102190 0 VVPIASLTPYQSK AGPSLSHTSGGTQSKVVPIASLTPYQSKWT SKVVPIASLTPYQSKWTICARVTNKSQIRT K V V S K W 1 0 0 0 0 1 0 0 0 1 1 1 0 0 2 2 1 0 1 2 0 0 13 0 1401.7868 P27694 P27694 184 196 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 2 0.00078851 144.17 By MS/MS 6.5 1.12 1 1 1 1 4 7985900 7985900 0 15837 708 16779 40285;40286;40287;40288 28418 28418 1 289390 0 VVPSFLPVDQGGSLVGR MLHPWNNEGAPPEDKVVPSFLPVDQGGSLV PSFLPVDQGGSLVGRNGVGGMAKEATMKGS K V V G R N 0 1 0 1 0 1 0 3 0 0 2 0 0 1 2 2 0 0 0 4 0 0 17 0 1725.9414 Q14126 Q14126 668 684 DSG2 Desmoglein-2 yes yes 2 0.0038754 108.97 By MS/MS 3.5 0.5 1 1 2 474100 474100 0 15838 1407 16780 40289;40290 28419 28419 1 12478 0 VVQAASATLPTVPQK AEQQQVVQIPQQALRVVQAASATLPTVPQK VVQAASATLPTVPQKPSQNFQIQAAEPTPT R V V Q K P 3 0 0 0 0 2 0 0 0 0 1 1 0 0 2 1 2 0 0 3 0 0 15 0 1508.8562 Q02086 Q02086 323 337 SP2 Transcription factor Sp2 yes yes 2 0.0055251 102.52 By MS/MS By MS/MS 5.09 3.06 2 1 2 2 1 1 2 5 6 15663000 4775500 10888000 15839 1249 16781 40291;40292;40293;40294;40295;40296;40297;40298;40299;40300;40301 28420;28421;28422;28423;28424;28425;28426 28425 7 1296700 126860000 VVQGLFDNFLR YRVLHAAASAGEHEKVVQGLFDNFLRLRLR EHEKVVQGLFDNFLRLRLRDSSLGAVCVAL K V V L R L 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 2 0 0 11 0 1306.7034 Q8WVB6 Q8WVB6 648 658 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 2 0.0010994 132.32 By MS/MS 4 0 1 1 136270 136270 0 15840 2027 16782 40302 28427 28427 1 3720 0 VVQGSPEVPGITVR VALALQQALGQELARVVQGSPEVPGITVRV RVVQGSPEVPGITVRVLQALATLLSSPHGG R V V V R V 0 1 0 0 0 1 1 2 0 1 0 0 0 0 2 1 1 0 0 4 0 0 14 0 1436.7987 Q8N201 Q8N201 1391 1404 INTS1 Integrator complex subunit 1 yes yes 2 0.007775 98.105 By MS/MS 2 0 1 1 357360 357360 0 15841 1903 16783 40303 28428;28429 28429 2 17763 0 VVQHLCQR LLRFRQHLLGTSPERVVQHLCQRRVEPPEL LGTSPERVVQHLCQRRVEPPELPADLQHWI R V V Q R R 0 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 1038.5393 Q8WUY1 Q8WUY1 163 170 THEM6 Protein THEM6 yes yes 2 0.0066989 130.77 By MS/MS 9 0 1 1 498700 498700 0 15842 2020 16784 40304 28430 28430 1 286210 0 VVQMLGSLGGQINK LSSNEAISLEEIRIRVVQMLGSLGGQINKN RVVQMLGSLGGQINKNLLTVTSSDEMMKSY R V V N K N 0 0 1 0 0 2 0 3 0 1 2 1 1 0 0 1 0 0 0 2 0 0 14 0 1442.7915 P78527 P78527 855 868 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 2.1306E-35 262.07 By MS/MS 2.5 1.12 1 1 1 1 4 9119900 9119900 0 15843 1197 16785 40305;40306;40307;40308 28431;28432 28432 981 2 412050 0 VVQNVFQFR LIQPKIEQPFKLVEKVVQNVFQFRRKYCHR FKLVEKVVQNVFQFRRKYCHRGLRMLFPEA K V V F R R 0 1 1 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 9 0 1135.6138 Q8WVM0 Q8WVM0 248 256 TFB1M Dimethyladenosine transferase 1, mitochondrial yes yes 2 9.7917E-07 192.31 By MS/MS 7.5 0.5 1 1 2 1571000 1571000 0 15844 2032 16786 40309;40310 28433 28433 1 49026 0 VVQSMTQLVR GYENSRCYNEMALIRVVQSMTQLVRRPPEV MALIRVVQSMTQLVRRPPEVFEQEIRQHFS R V V V R R 0 1 0 0 0 2 0 0 0 0 1 0 1 0 0 1 1 0 0 3 0 0 10 0 1159.6383 Q9C0C9 Q9C0C9 1108 1117 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 2 0.00070279 121.6 By MS/MS 2 0 1 1 227650 227650 0 15845 2435 16787 40311 28434 28434 1497 1 11316 0 VVQVSAGDSHTAALTDDGR EGSEMVPGKVELQEKVVQVSAGDSHTAALT SAGDSHTAALTDDGRVFLWGSFRDNNGVIG K V V G R V 3 1 0 3 0 1 0 2 1 0 1 0 0 0 0 2 2 0 0 3 0 0 19 0 1897.913 P18754 P18754 121 139 RCC1 Regulator of chromosome condensation yes yes 3 0.011168 74.793 By MS/MS 7 0 1 1 2902800 2902800 0 15846 625 16788 40312 28435 28435 1 51873 0 VVQVYADTQEINLK RLIFKNCERFNEMMKVVQVYADTQEINLKA KVVQVYADTQEINLKADSEVAQAGKAVALY K V V L K A 1 0 1 1 0 2 1 0 0 1 1 1 0 0 0 0 1 0 1 3 0 0 14 0 1618.8566 Q9UPN9 Q9UPN9 1044 1057 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 0.0066602 99.844 By MS/MS 3 0 1 1 629670 629670 0 15847 2852 16789 40313 28436 28436 1 16438 0 VVSAAVQAQHSATK MDPNFISVRQQFLLKVVSAAVQAQHSATKV KVVSAAVQAQHSATKVKDPTEEATPTPFGK K V V T K V 4 0 0 0 0 2 0 0 1 0 0 1 0 0 0 2 1 0 0 3 0 0 14 0 1395.747 Q9H2M9 Q9H2M9 1220 1233 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 2 8.1284E-08 179.59 By MS/MS 3 0 1 1 480620 480620 0 15848 2481 16790 40314 28437 28437 1 12547 0 VVSAGTYPVLIQGETSVGK ILTSSVKLNLRDIVRVVSAGTYPVLIQGET GTYPVLIQGETSVGKTSLIQWLAAATGNHC R V V G K T 1 0 0 0 0 1 1 3 0 1 1 1 0 0 1 2 2 0 1 4 0 0 19 0 1904.0255 Q9NU22 Q9NU22 1072 1090 MDN1 Midasin yes yes 2 0.019018 69.729 By MS/MS 2 0.816 1 1 1 3 401300 401300 0 15849 2635 16791 40315;40316;40317 28438 28438 1 14973 0 VVSEDFLQDVSASTK KMNKKMEEVKEANIRVVSEDFLQDVSASTK VVSEDFLQDVSASTKSLQELFLAHILSPWG R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.5601E-50 335.25 By MS/MS By MS/MS 4.22 1.62 1 1 4 1 1 1 8 1 69411000 69302000 108960 15850 521 16792 40318;40319;40320;40321;40322;40323;40324;40325;40326 28439;28440;28441;28442;28443;28444;28445 28445 7 1875300 227680 VVSGAANVIGPK CGLPQPCPEEHLAFRVVSGAANVIGPKICL AFRVVSGAANVIGPKICLEDKMLMSSVKDN R V V P K I 2 0 1 0 0 0 0 2 0 1 0 1 0 0 1 1 0 0 0 3 0 0 12 0 1110.6397 P98173 P98173 74 85 FAM3A Protein FAM3A yes yes 2 0.00025333 150.15 By MS/MS 8.5 0.5 1 1 2 1799100 1799100 0 15851 1224 16793 40327;40328 28446 28446 1 628720 0 VVSPWNSEDAK SQCFAAWYGHCPGLKVVSPWNSEDAKGLIK PGLKVVSPWNSEDAKGLIKSAIRDNNPVVV K V V A K G 1 0 1 1 0 0 1 0 0 0 0 1 0 0 1 2 0 1 0 2 0 0 11 0 1230.5881 P11177 P11177 174 184 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 2 0.0062393 102.53 By MS/MS 8 0.816 1 1 1 3 36161000 36161000 0 15852 549 16794 40329;40330;40331 28447;28448 28447 2 1488400 0 VVSQYSSLLSPMSVNAVMK RETLLNSATTSLNSKVVSQYSSLLSPMSVN YSSLLSPMSVNAVMKVIDPATATSVDLRDI K V V M K V 1 0 1 0 0 1 0 0 0 0 2 1 2 0 1 5 0 0 1 4 0 0 19 0 2039.0431 P50991 P50991 175 193 CCT4 T-complex protein 1 subunit delta yes yes 2;3 1.3304E-19 205.27 By MS/MS By matching 7 1.18 5 2 1 2 9 1 49471000 49448000 23540 15853 956 16795;16796 40332;40333;40334;40335;40336;40337;40338;40339;40340;40341 28449;28450;28451;28452;28453;28454;28455;28456;28457 28455 722;723 9 936910 72196 VVSSIEQK VAYKNVVGARRSSWRVVSSIEQKTEGAEKK ARRSSWRVVSSIEQKTEGAEKKQQMAREYR R V V Q K T 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 2 0 0 0 2 0 0 8 0 888.49165 P63104 P63104 61 68 YWHAZ 14-3-3 protein zeta/delta yes yes 2 0.010733 118.74 By MS/MS By matching 8 0 2 1 1 7982400 7947900 34491 15854 1169 16797 40342;40343 28458 28458 1 524320 294250 VVSSIEQKTEGAEK VAYKNVVGARRSSWRVVSSIEQKTEGAEKK RVVSSIEQKTEGAEKKQQMAREYREKIETE R V V E K K 1 0 0 0 0 1 3 1 0 1 0 2 0 0 0 2 1 0 0 2 0 0 14 1 1503.7781 P63104 P63104 61 74 YWHAZ 14-3-3 protein zeta/delta yes yes 2 4.0453E-34 255.41 By MS/MS 8 0 1 1 1084700 1084700 0 15855 1169 16798 40344 28459 28459 1 71557 0 VVSSSIVDKYIGESAR LARAVASQLDCNFLKVVSSSIVDKYIGESA VSSSIVDKYIGESARLIREMFNYARDHQPC K V V A R L 1 1 0 1 0 0 1 1 0 2 0 1 0 0 0 4 0 0 1 3 0 0 16 1 1708.8996 P62333 P62333 198 213 PSMC6 26S protease regulatory subunit 10B yes yes 3 0.0012525 123.72 By MS/MS 7.5 0.5 1 1 2 3889900 3889900 0 15856 1133 16799 40345;40346 28460 28460 1 83464 0 VVSTPPSVTEPPEK PAIKEPLPVEDVCPKVVSTPPSVTEPPEKE KVVSTPPSVTEPPEKELSTVSKLPAEPPAL K V V E K E 0 0 0 0 0 0 2 0 0 0 0 1 0 0 4 2 2 0 0 3 0 0 14 0 1465.7664 Q92667 Q92667 67 80 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 2 0.017014 93.345 By MS/MS 3 0 1 1 456300 456300 0 15857 2074 16800 40347 28461 28461 1 11912 0 VVSTSLDCLQK YFLPFELACQSKSPRVVSTSLDCLQKLIAY KSPRVVSTSLDCLQKLIAYGHITGNAPDSG R V V Q K L 0 0 0 1 1 1 0 0 0 0 2 1 0 0 0 2 1 0 0 2 0 0 11 0 1248.6384 Q9Y6D5 Q9Y6D5 83 93 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.00012535 157.99 By MS/MS 2 0 1 1 413030 413030 0 15858 3002 16801 40348 28462 28462 1 20530 0 VVTANHR LRDQVLHEHIQRLSKVVTANHRALQIPEVY EHIQRLSKVVTANHRALQIPEVYLREAPWP K V V H R A 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 2 0 0 7 0 795.43514 Q14C86 Q14C86 1354 1360 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.047626 102.77 By MS/MS 2 0 1 1 171070 171070 0 15859 1455 16802 40349 28463 28463 1 8502.9 0 VVTDTDETELAR IEEKRGVFNVQMEPKVVTDTDETELARQME EPKVVTDTDETELARQMERLERENAEVDGD K V V A R Q 1 1 0 2 0 0 2 0 0 0 1 0 0 0 0 0 3 0 0 2 0 0 12 0 1347.6518 P05198 P05198 277 288 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 4.2984E-11 205.53 By MS/MS By MS/MS 7.14 2.7 1 2 2 1 1 5 2 21108000 20703000 405030 15860 471 16803 40350;40351;40352;40353;40354;40355;40356 28464;28465;28466;28467;28468 28467 5 1258300 2896000 VVTLLSDPENIVK YDTELQALHEMVQQKVVTLLSDPENIVKQT QKVVTLLSDPENIVKQTLMENGITRLCVFF K V V V K Q 0 0 1 1 0 0 1 0 0 1 2 1 0 0 1 1 1 0 0 3 0 0 13 0 1425.8079 Q99570 Q99570 541 553 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 2 1.2749E-17 220.82 By MS/MS 4 0.816 1 1 1 3 1287700 1287700 0 15861 2273 16804 40357;40358;40359 28469 28469 1 36682 0 VVTLLYDLVTEK RTLVQEKGTEVLAVRVVTLLYDLVTEKMFA AVRVVTLLYDLVTEKMFAEEEAELTQEMSP R V V E K M 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 1 3 0 0 12 0 1391.7912 Q9H173 Q9H173 332 343 SIL1 Nucleotide exchange factor SIL1 yes yes 2 8.6615E-05 188.99 By MS/MS 6 0 1 1 328670 328670 0 15862 2462 16805 40360 28470 28470 1 2563 0 VVTLQGQIIEQSGTMTGGGSK DQATRVAYQKDRRWRVVTLQGQIIEQSGTM QIIEQSGTMTGGGSKVMKGRMGSSLVIEIS R V V S K V 0 0 0 0 0 3 1 5 0 2 1 1 1 0 0 2 3 0 0 2 0 0 21 0 2090.0678 Q9NTJ3 Q9NTJ3 737 757 SMC4 Structural maintenance of chromosomes protein 4 yes yes 2 3.5645E-40 236.75 By MS/MS 2.5 0.5 1 1 2 987110 987110 0 15863 2630 16806 40361;40362 28471 28471 1553 1 27155 0 VVTQNICQYR GIRLSAEQAKQLVSRVVTQNICQYRSLQYS QLVSRVVTQNICQYRSLQYSRQEGLDGGLP R V V Y R S 0 1 1 0 1 2 0 0 0 1 0 0 0 0 0 0 1 0 1 2 0 0 10 0 1279.6343 Q8N163 Q8N163 748 757 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 2 2.0518E-09 195.57 By MS/MS 4 0.707 1 2 1 4 6144400 6144400 0 15864 1895 16807 40363;40364;40365;40366 28472;28473 28472 2 163400 0 VVTSEDQVQEGTK YKQENEMLSSSRDQRVVTSEDQVQEGTKVL QRVVTSEDQVQEGTKVLKLKTKMADKENMK R V V T K V 0 0 0 1 0 2 2 1 0 0 0 1 0 0 0 1 2 0 0 3 0 0 13 0 1418.6889 Q8WWK9 Q8WWK9 58 70 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 7.8723E-46 274.53 By MS/MS By matching 5 0 2 1 1 2139800 2106100 33724 15865 2040 16808 40367;40368 28474 28474 1 86567 99788 VVVAENFDEIVNNENK LKSEPIPESNDGPVKVVVAENFDEIVNNEN VVAENFDEIVNNENKDVLIEFYAPWCGHCK K V V N K D 1 0 4 1 0 0 3 0 0 1 0 1 0 1 0 0 0 0 0 4 0 0 16 0 1831.8952 P30101 P30101 380 395 PDIA3 Protein disulfide-isomerase A3 yes yes 2 1.133E-28 291.75 By MS/MS 6 0 1 1 2872500 2872500 0 15866 736 16809 40369 28475 28475 1 22400 0 VVVCDNGTGFVK ______________________________ GRKVVVCDNGTGFVKCGYAGSNFPEHIFPA K V V V K C 0 0 1 1 1 0 0 2 0 0 0 1 0 1 0 0 1 0 0 4 0 0 12 0 1293.6387 P61160 P61160 8 19 ACTR2 Actin-related protein 2 yes yes 2 0.00028019 147.28 By MS/MS 7 0 1 1 1925500 1925500 0 15867 1089 16810 40370 28476 28476 1 34410 0 VVVDALSGLK LPPACTRAERREVERVVVDALSGLKGDLAG REVERVVVDALSGLKGDLAGRYYRLSEMTE R V V L K G 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 3 0 0 10 0 999.59645 P12532 P12532 190 199 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.01328 98.044 By MS/MS 7 0 1 1 0 0 0 15868 566 16811 40371 28477 28477 1 0 0 VVVDSDSLAFVK VINPDDRVFEQGGARVVVDSDSLAFVKGAQ GARVVVDSDSLAFVKGAQVDFSQELIRSSF R V V V K G 1 0 0 2 0 0 0 0 0 0 1 1 0 1 0 2 0 0 0 4 0 0 12 0 1277.6867 Q86U28 Q86U28 106 117 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial yes yes 2 0.021808 83.862 By MS/MS 10 0 1 1 353610 353610 0 15869 1818 16812 40372 28478 28478 1 375850 0 VVVHKETELAEEGED IREAREQHPDMSVTRVVVHKETELAEEGED VVVHKETELAEEGED_______________ R V V E D - 1 0 0 1 0 0 5 1 1 0 1 1 0 0 0 0 1 0 0 3 0 0 15 1 1682.7999 O43491 O43491 991 1005 EPB41L2 Band 4.1-like protein 2 yes yes 2 3.9303E-06 171.49 By MS/MS 3 0 1 1 538030 538030 0 15870 204 16813 40373 28479 28479 1 14045 0 VVVLMGSTSDLGHCEK AERVELLLKSESQCRVVVLMGSTSDLGHCE VVLMGSTSDLGHCEKIKKACGNFGIPCELR R V V E K I 0 0 0 1 1 0 1 2 1 0 2 1 1 0 0 2 1 0 0 3 0 0 16 0 1730.8331 P22234 P22234 268 283 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 3 0.0083683 86.944 By MS/MS 7 0 1 1 2200200 2200200 0 15871 656 16814 40374 28480 28480 442 1 39317 0 VVVLMNIDLLR ENRKLRKWHTTFCEKVVVLMNIDLLRQQQR FCEKVVVLMNIDLLRQQQRWKDGLQELRTG K V V L R Q 0 1 1 1 0 0 0 0 0 1 3 0 1 0 0 0 0 0 0 3 0 0 11 0 1283.7635 Q8NCM8 Q8NCM8 703 713 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.040252 74.376 By MS/MS 1 0 1 1 36796 36796 0 15872 1954 16815 40375 28481 28481 1304 1 1797.8 0 VVVQGIPEVSR SMYYVLQFLKEDLPKVVVQGIPEVSRAVIH DLPKVVVQGIPEVSRAVIHIDEQSGKEKYK K V V S R A 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 4 0 0 11 0 1181.6768 O14802 O14802 1199 1209 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 2 0.0026238 117.71 By MS/MS 3 1.41 1 1 1 1 1 5 2605000 2605000 0 15873 128 16816 40376;40377;40378;40379;40380 28482 28482 1 73974 0 VVVQVLAEEPEAVLK EDAFRYMAQGKHIGKVVVQVLAEEPEAVLK VVVQVLAEEPEAVLKGAKPKLMSAISKTFC K V V L K G 2 0 0 0 0 1 3 0 0 0 2 1 0 0 1 0 0 0 0 5 0 0 15 0 1621.9291 P49327 P49327 1852 1866 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2;3 2.7652E-21 231.17 By MS/MS 3.5 1.5 1 2 2 2 2 1 10 30803000 30803000 0 15874 915 16817 40381;40382;40383;40384;40385;40386;40387;40388;40389;40390 28483;28484;28485;28486;28487;28488;28489;28490 28484 8 1090100 0 VVVSHSTHR RTKMVYCKIDQTQRKVVVSHSTHRTFGKQQ DQTQRKVVVSHSTHRTFGKQQWQQLYDTLN K V V H R T 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 2 1 0 0 3 0 0 9 0 1020.5465 Q7L2H7 Q7L2H7 332 340 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 2.2185E-07 195.06 By MS/MS 7.5 0.5 1 1 2 6638300 6638300 0 15875 1764 16818 40391;40392 28491;28492 28491 2 158910 0 VVVTVEQTEEELER YLEKEEKCLPPPSIRVVVTVEQTEEELERA RVVVTVEQTEEELERAASTIKEVAQAVLL_ R V V E R A 0 1 0 0 0 1 5 0 0 0 1 0 0 0 0 0 2 0 0 4 0 0 14 0 1658.8363 O15269 O15269 446 459 SPTLC1 Serine palmitoyltransferase 1 yes yes 2 9.1392E-164 410.61 By MS/MS By MS/MS 7.4 1.5 2 1 1 1 4 1 59281000 59281000 0 15876 165 16819 40393;40394;40395;40396;40397 28493;28494;28495;28496 28494 4 804920 0 VVVTVEQTEEELERAASTIK YLEKEEKCLPPPSIRVVVTVEQTEEELERA EQTEEELERAASTIKEVAQAVLL_______ R V V I K E 2 1 0 0 0 1 5 0 0 1 1 1 0 0 0 1 3 0 0 4 0 0 20 1 2230.1693 O15269 O15269 446 465 SPTLC1 Serine palmitoyltransferase 1 yes yes 3 0.032426 55.33 By MS/MS 6 0 1 1 2288600 2288600 0 15877 165 16820 40398 28497 28497 1 17847 0 VVVVAGETGSGK FKHRDSIVETLKRHRVVVVAGETGSGKSTQ RHRVVVVAGETGSGKSTQVPHFLLEDLLLN R V V G K S 1 0 0 0 0 0 1 3 0 0 0 1 0 0 0 1 1 0 0 4 0 0 12 0 1101.603 Q7Z478 Q7Z478 590 601 DHX29 ATP-dependent RNA helicase DHX29 yes yes 2 0.00063676 137.46 By MS/MS 3 0 1 1 454090 454090 0 15878 1791 16821 40399 28498 28498 1 11854 0 VVVVDCK HHVKDISCLNRDPARVVVVDCKKEAFRLQP CLNRDPARVVVVDCKKEAFRLQPYNGVALR R V V C K K 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 7 0 817.43677 Q3ZCQ8 Q3ZCQ8 244 250 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2 0.023329 119.57 By MS/MS 8.5 1.12 1 1 1 1 4 6817700 6817700 0 15879 1573 16822 40400;40401;40402;40403 28499 28499 1 404220 0 VVVVDCKK HHVKDISCLNRDPARVVVVDCKKEAFRLQP LNRDPARVVVVDCKKEAFRLQPYNGVALRP R V V K K E 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 4 0 0 8 1 945.53174 Q3ZCQ8 Q3ZCQ8 244 251 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 3 0.0081653 125.81 By MS/MS 7.5 0.5 1 1 2 6962600 6962600 0 15880 1573 16823 40404;40405 28500 28500 1 195100 0 VVVVQAISALCQK KQISSFMSEISDEFKVVVVQAISALCQKYP FKVVVVQAISALCQKYPRKHAVLMNFLFTM K V V Q K Y 2 0 0 0 1 2 0 0 0 1 1 1 0 0 0 1 0 0 0 4 0 0 13 0 1413.8014 Q9Y678;Q9UBF2 Q9Y678 377 389 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 2 0.00022975 147.37 By MS/MS 4.5 0.5 1 1 2 1037800 1037800 0 15881 2996;2748 16824 40406;40407 28501 28501 1 34646 0 VVVVTGANTGIGK LSSGVCTSTVQLPGKVVVVTGANTGIGKET GKVVVVTGANTGIGKETAKELAQRGARVYL K V V G K E 1 0 1 0 0 0 0 3 0 1 0 1 0 0 0 0 2 0 0 4 0 0 13 0 1213.703 Q8TC12 Q8TC12 43 55 RDH11 Retinol dehydrogenase 11 yes yes 2 2.6826E-25 240 By MS/MS 9 0.816 1 1 1 3 13790000 13790000 0 15882 1992 16825 40408;40409;40410 28502 28502 1 1092000 0 VVVVTGANTGIGKETAK LSSGVCTSTVQLPGKVVVVTGANTGIGKET VVTGANTGIGKETAKELAQRGARVYLACRD K V V A K E 2 0 1 0 0 0 1 3 0 1 0 2 0 0 0 0 3 0 0 4 0 0 17 1 1642.9254 Q8TC12 Q8TC12 43 59 RDH11 Retinol dehydrogenase 11 yes yes 3 0.029852 61.657 By MS/MS 8 0 1 1 1136000 1136000 0 15883 1992 16826 40411 28503 28503 1 74941 0 VVWVEESDKR AVGRVGSTSENITQKVVWVEESDKRSFLLD NITQKVVWVEESDKRSFLLDLLNATGKDSL K V V K R S 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 3 0 0 10 1 1245.6354 O00571 O00571 419 428 DDX3X ATP-dependent RNA helicase DDX3X yes yes 2;3 0.0027976 135.71 By MS/MS By matching 5.57 0.728 4 2 1 5 2 21625000 21562000 62332 15884 105 16827 40412;40413;40414;40415;40416;40417;40418 28504;28505 28505 2 728280 184440 VVYGGGAAEISCALAVSQEADK HDALCVIRNLIRDNRVVYGGGAAEISCALA AEISCALAVSQEADKCPTLEQYAMRAFADA R V V D K C 5 0 0 1 1 1 2 3 0 1 1 1 0 0 0 2 0 0 1 3 0 0 22 0 2194.0576 P48643 P48643 418 439 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 9.8444E-10 158.14 By MS/MS 6 0 2 2 26129000 26129000 0 15885 909 16828 40419;40420 28506;28507 28507 2 203750 0 VWDDGIIDPADTR KKFEEEGNPYYSSARVWDDGIIDPADTRLV ARVWDDGIIDPADTRLVLGLSFSAALNAPI R V W T R L 1 1 0 4 0 0 0 1 0 2 0 0 0 0 1 0 1 1 0 1 0 0 13 0 1471.6943 Q9HCC0 Q9HCC0 526 538 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 2 0.019289 105.46 By MS/MS 6 0 1 1 1426300 1426300 0 15886 2559 16829 40421 28508 28508 0 11122 0 VWDISGLR TEDLVVSASLDQTVRVWDISGLRKKNLSPG SLDQTVRVWDISGLRKKNLSPGAVESDVRG R V W L R K 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 1 0 1 0 0 8 0 944.50797 P53621 P53621 161 168 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.006165 148.04 By MS/MS 4 0.816 1 1 1 3 3313200 3313200 0 15887 1005 16830 40422;40423;40424 28509 28509 1 88278 0 VWDLFPEADK KTCHSFIINEKMNGKVWDLFPEADKVRTML KMNGKVWDLFPEADKVRTMLVRKIQEESLR K V W D K V 1 0 0 2 0 0 1 0 0 0 1 1 0 1 1 0 0 1 0 1 0 0 10 0 1218.5921 Q99613;B5ME19 Q99613 765 774 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.017217 105.78 By MS/MS 4.5 1.12 1 1 1 1 4 3202600 3202600 0 15888 2275 16831 40425;40426;40427;40428 28510 28510 1 85349 0 VWELGGCANK TKSDAPKEKGKKAPRVWELGGCANKEVLDY KKAPRVWELGGCANKEVLDYSTPTTNGTPE R V W N K E 1 0 1 0 1 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1132.5335 P08240 P08240 247 256 SRPR Signal recognition particle receptor subunit alpha yes yes 2 0.0072263 117.81 By MS/MS 5 0 1 1 0 0 0 15889 502 16832 40429 28511 28511 1 0 0 VWLDPNETNEIANANSR QKRLASSVLRCGKKKVWLDPNETNEIANAN LDPNETNEIANANSRQQIRKLIKDGLIIRK K V W S R Q 2 1 4 1 0 0 2 0 0 1 1 0 0 0 1 1 1 1 0 1 0 0 17 0 1941.9181 P84098 P84098 22 38 RPL19 60S ribosomal protein L19 yes yes 2 6.6624E-20 213.99 By MS/MS 8 0 1 1 1887800 1887800 0 15890 1218 16833 40430 28512 28512 1 124540 0 VWNLANCK SNPIIVSCGWDKLVKVWNLANCKLKTNHIG GWDKLVKVWNLANCKLKTNHIGHTGYLNTV K V W C K L 1 0 2 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 8 0 1003.4909 P63244 P63244 176 183 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 0.0056149 152.63 By MS/MS 8 0 1 1 3135500 3135500 0 15891 1178 16834 40431 28513 28513 1 206850 0 VWNTLSIK DIGSLAIGVGDGMIRVWNTLSIKNNYDVKN VGDGMIRVWNTLSIKNNYDVKNFWQGVKSK R V W I K N 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 0 1 0 0 8 0 959.54402 Q8TEQ6 Q8TEQ6 406 413 GEMIN5 Gem-associated protein 5 yes yes 2 0.019809 107.01 By MS/MS 4 0.816 1 1 1 3 1066800 1066800 0 15892 2003 16835 40432;40433;40434 28514 28514 1 31266 0 VWQVTIGTR DGQTLFAGYTDNLVRVWQVTIGTR______ TDNLVRVWQVTIGTR_______________ R V W T R - 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 2 1 0 2 0 0 9 0 1058.5873 P63244 P63244 309 317 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 8.1748E-08 195.57 By MS/MS By MS/MS 8 0 2 1 1 1655400 1590200 65147 15893 1178 16836 40435;40436 28515;28516 28516 2 104910 555780 VYAEVNSLR ______________________________ AGSRARVYAEVNSLRSREYWDYEAHVPSWG R V Y L R S 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 9 0 1049.5506 P19784 P19784 12 20 CSNK2A2 Casein kinase II subunit alpha yes yes 2 0.0023314 126.24 By MS/MS 7 0 1 1 1531300 1531300 0 15894 636 16837 40437 28517 28517 1 27365 0 VYASNQEFESVR EPFVGVLSSHFKVFRVYASNQEFESVRLNE VFRVYASNQEFESVRLNETLSSFSDDNKIT R V Y V R L 1 1 1 0 0 1 2 0 0 0 0 0 0 1 0 2 0 0 1 2 0 0 12 0 1427.6681 Q96K76 Q96K76 1085 1096 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 0.01413 131.82 By MS/MS 3 0 1 1 687010 687010 0 15895 2216 16838 40438 28518 28518 0 17935 0 VYATILNAGTNTDGFK GVVAVLLTKKSLARRVYATILNAGTNTDGF YATILNAGTNTDGFKEQGVTFPSGDIQEQL R V Y F K E 2 0 2 1 0 0 0 2 0 1 1 1 0 1 0 0 3 0 1 1 0 0 16 0 1683.8468 P49327 P49327 242 257 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 5.2459E-29 243.85 By MS/MS 3 1 1 1 2 1953100 1953100 0 15896 915 16839 40439;40440 28519;28520;28521 28519 3 82542 0 VYDQMPEPR VAGTLTNKMAPALRKVYDQMPEPRYVVSMG APALRKVYDQMPEPRYVVSMGSCANGGGYY K V Y P R Y 0 1 0 1 0 1 1 0 0 0 0 0 1 0 2 0 0 0 1 1 0 0 9 0 1133.5175 O75251 O75251 137 145 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 2 0.0020886 128.86 By MS/MS 9 0 1 1 243680 243680 0 15897 293 16840 40441 28522 28522 1 139850 0 VYDQTNPYTDVR ETLEYECFGGEYRPKVYDQTNPYTDVRRRY RPKVYDQTNPYTDVRRRYWNAYMLFYQRVS K V Y V R R 0 1 1 2 0 1 0 0 0 0 0 0 0 0 1 0 2 0 2 2 0 0 12 0 1469.6787 Q9UPU5 Q9UPU5 2017 2028 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 1.4056E-16 222.18 By MS/MS 2.5 1.12 1 1 1 1 4 894910 894910 0 15898 2854 16841 40442;40443;40444;40445 28523 28523 1 36088 0 VYEAVELLK DQYVKAASHLLSIHKVYEAVELLKSNHFYR LLSIHKVYEAVELLKSNHFYREAIAIAKAR K V Y L K S 1 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 2 0 0 9 0 1062.5961 Q8TEQ6 Q8TEQ6 991 999 GEMIN5 Gem-associated protein 5 yes yes 2 0.00079132 146.81 By MS/MS 4 0.816 1 1 1 3 2638000 2638000 0 15899 2003 16842 40446;40447;40448 28524 28524 1 70867 0 VYEEVLSVTPNDGFAK GVGYLLIGDNDNAKKVYEEVLSVTPNDGFA YEEVLSVTPNDGFAKVHYGFILKAQNKIAE K V Y A K V 1 0 1 1 0 0 2 1 0 0 1 1 0 1 1 1 1 0 1 3 0 0 16 0 1766.8727 Q12797 Q12797 476 491 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 2 5.1859E-06 148.13 By MS/MS 4 0 1 1 1332000 1332000 0 15900 1307 16843 40449 28525 28525 1 36363 0 VYEFLDKLDVVR ALDLVAAKCYYYHARVYEFLDKLDVVRSFL HARVYEFLDKLDVVRSFLHARLRTATLRHD R V Y V R S 0 1 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 1 3 0 0 12 1 1494.8082 O43242 O43242 217 228 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 2 3.1285E-06 183.03 By MS/MS 6 0 1 1 4966000 4966000 0 15901 187 16844 40450 28526 28526 1 38725 0 VYEGERPLTK IFSTASDNQPTVTIKVYEGERPLTKDNHLL TVTIKVYEGERPLTKDNHLLGTFDLTGIPP K V Y T K D 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 0 1 0 1 1 0 0 10 1 1190.6295 P11021 P11021 465 474 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0076381 120.27 By MS/MS By matching 5 0 2 1 1 14455000 14420000 35527 15902 545 16845 40451;40452 28527 28527 1 592720 105120 VYEIPGLEPITFAGK GVRSTRKSEPPPLDRVYEIPGLEPITFAGK VYEIPGLEPITFAGKMHFVPWLARPIFPPW R V Y G K M 1 0 0 0 0 0 2 2 0 2 1 1 0 1 2 0 1 0 1 1 0 0 15 0 1632.8763 Q9BZE1 Q9BZE1 49 63 MRPL37 39S ribosomal protein L37, mitochondrial yes yes 2 8.7387E-05 136.96 By MS/MS 7 0 1 1 927320 927320 0 15903 2420 16846 40453 28528 28528 1 16571 0 VYEIQDIYENSWTK ELQASRVSSDVIDQKVYEIQDIYENSWTKL KVYEIQDIYENSWTKLTERFFKNTPWPEAE K V Y T K L 0 0 1 1 0 1 2 0 0 2 0 1 0 0 0 1 1 1 2 1 0 0 14 0 1786.8414 Q9Y262 Q9Y262 88 101 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 3.8819E-59 295.34 By MS/MS 5.5 0.5 1 1 2 13195000 13195000 0 15904 2868 16847 40454;40455 28529;28530 28530 2 126310 0 VYELQASR IQYFHKTVSDLIDQKVYELQASRVSSDVID SDLIDQKVYELQASRVSSDVIDQKVYEIQD K V Y S R V 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 964.49779 Q9Y262 Q9Y262 71 78 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 2 0.0015072 166.3 By MS/MS 7 1.41 1 1 1 1 1 5 19811000 19811000 0 15905 2868 16848 40456;40457;40458;40459;40460 28531;28532 28532 2 469120 0 VYGTVLSR PHELKEVSQTGDLRKVYGTVLSRHHHLVRK QTGDLRKVYGTVLSRHHHLVRKTDAVYDPA K V Y S R H 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 0 8 0 893.49707 Q9UDR5 Q9UDR5 260 267 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase yes yes 2 0.0066277 131.03 By MS/MS 4 0 1 1 631290 631290 0 15906 2762 16849 40461 28533 28533 1 17233 0 VYISNGQVLDSR ______________________________ ______________________________ M V Y S R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 0 2 0 0 1 2 0 0 12 0 1349.6939 Q9Y6D0 Q9Y6D0 2 13 SELK Selenoprotein K yes yes 2 3.6024E-11 206.97 By MS/MS 10 0 1 1 450640 450640 0 15907 3001 16850 40462 28534;28535 28535 2 478990 0 VYLACRDVEKGELVAK IGKETAKELAQRGARVYLACRDVEKGELVA YLACRDVEKGELVAKEIQTTTGNQQVLVRK R V Y A K E 2 1 0 1 1 0 2 1 0 0 2 2 0 0 0 0 0 0 1 3 0 0 16 2 1848.9768 Q8TC12 Q8TC12 68 83 RDH11 Retinol dehydrogenase 11 yes yes 3 0.01036 82.651 By MS/MS 8 0 1 1 3414200 3414200 0 15908 1992 16851 40463 28536 28536 1 225230 0 VYLGDIPLK LIDWNNPAIINKMYKVYLGDIPLKTKEGAV INKMYKVYLGDIPLKTKEGAVLKPELKRDP K V Y L K T 0 0 0 1 0 0 0 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 9 0 1016.5906 Q5VYK3 Q5VYK3 305 313 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.0059227 113.71 By MS/MS 3 0.816 1 1 1 3 1967100 1967100 0 15909 1657 16852 40464;40465;40466 28537;28538 28538 2 54870 0 VYLQNEYK LGAVYDVSHYNALLKVYLQNEYKFSPTDFL HYNALLKVYLQNEYKFSPTDFLAKMEEANI K V Y Y K F 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 1 0 0 8 0 1055.5288 P42704 P42704 171 178 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 2 0.0041329 141.52 By MS/MS 3.5 1.12 1 1 1 1 4 38836000 38836000 0 15910 854 16853 40467;40468;40469;40470 28539;28540 28539 2 1027100 0 VYNALVAFIR ELSPGSCFFLPRGTRVYNALVAFIRAEYAH PRGTRVYNALVAFIRAEYAHRGFSEVKTPT R V Y I R A 2 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 10 0 1164.6655 Q9BW92 Q9BW92 331 340 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 2 1.3981E-07 222.19 By MS/MS 5.5 0.5 1 1 2 2893800 2893800 0 15911 2391 16854 40471;40472 28541;28542 28542 2 44517 0 VYNEVPTFQLEVPK SDHAKELIVGEIFVRVYNEVPTFQLEVPKA RVYNEVPTFQLEVPKAFAASLLDYIGSQAQ R V Y P K A 0 0 1 0 0 1 2 0 0 0 1 1 0 1 2 0 1 0 1 3 0 0 14 0 1661.8665 O75165 O75165 1695 1708 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.0050516 130.15 By MS/MS 2.5 0.5 1 1 2 373500 373500 0 15912 287 16855 40473;40474 28543 28543 1 16401 0 VYNWDVK FLRDQFTTTEVNMARVYNWDVKRRNKDDST TTEVNMARVYNWDVKRRNKDDSTKNKA___ R V Y V K R 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 2 0 0 7 0 922.45487 P61758 P61758 179 185 VBP1 Prefoldin subunit 3 yes yes 2 0.036001 110.81 By MS/MS 9 0 1 1 2620400 2620400 0 15913 1105 16856 40475 28544 28544 1 1503800 0 VYQETSEMR STVISYSNTGDGAPKVYQETSEMRSAPGGI GDGAPKVYQETSEMRSAPGGIRETRRTVRD K V Y M R S 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 1141.5074 Q15773 Q15773 120 128 MLF2 Myeloid leukemia factor 2 yes yes 2 0.044601 82.831 By MS/MS 8 0 1 1 355880 355880 0 15914 1520 16857 40476 28545 28545 1 23477 0 VYQVFESVAK HFGFETVSEEEKGGKVYQVFESVAKKYDVM EKGGKVYQVFESVAKKYDVMNDMMSLGIHR K V Y A K K 1 0 0 0 0 1 1 0 0 0 0 1 0 1 0 1 0 0 1 3 0 0 10 0 1168.6128 Q5HYK3 Q5HYK3 68 77 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes yes 2 0.001763 118.03 By MS/MS 8 0 1 1 1009100 1009100 0 15915 1602 16858 40477 28546 28546 1 66572 0 VYQWDDPDPR AFEVSENGNLVVSGKVYQWDDPDPRLFDHP VVSGKVYQWDDPDPRLFDHPESPTPNPTEP K V Y P R L 0 1 0 3 0 1 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 10 0 1289.5677 P49327 P49327 958 967 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.00086962 128.91 By MS/MS 2.5 1.12 1 1 1 1 4 13684000 13684000 0 15916 915 16859 40478;40479;40480;40481 28547;28548;28549;28550 28547 4 538300 0 VYRIEGDETSTEAATR RPSRADQFEYVMYGKVYRIEGDETSTEAAT YRIEGDETSTEAATRLSAYVSYGGLLMRLQ K V Y T R L 2 2 0 1 0 0 3 1 0 1 0 0 0 0 0 1 3 0 1 1 0 0 16 1 1796.8541 P52434 P52434 96 111 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 2;3 0.0036156 126.56 By MS/MS 10 0 2 2 802790 802790 0 15917 986 16860 40482;40483 28551;28552 28552 2 853280 0 VYSLDDIRR RIVDLHSRIEESIDRVYSLDDIRRYLLFAR EESIDRVYSLDDIRRYLLFARQFKPKISKE R V Y R R Y 0 2 0 2 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 1 1135.5986 Q14566 Q14566 566 574 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0042917 139.68 By MS/MS 4 0 1 1 591540 591540 0 15918 1436 16861 40484 28553 28553 1 16149 0 VYSLFLDESR RKRKGTEVQVDDIKRVYSLFLDESRSTQYM DDIKRVYSLFLDESRSTQYMKEYQDAFLFN R V Y S R S 0 1 0 1 0 0 1 0 0 0 2 0 0 1 0 2 0 0 1 1 0 0 10 0 1227.6136 Q9Y230 Q9Y230 429 438 RUVBL2 RuvB-like 2 yes yes 2 1.1317E-11 213.53 By MS/MS By MS/MS 6.44 2.17 1 1 1 2 1 1 1 1 8 1 37365000 37274000 91270 15919 2864 16862 40485;40486;40487;40488;40489;40490;40491;40492;40493 28554;28555;28556;28557 28555 4 609340 279920 VYTENVDKR KVDVGQQPLRINGVKVYTENVDKRQIILDL RINGVKVYTENVDKRQIILDLQISFVGNCE K V Y K R Q 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 2 0 0 9 1 1122.5669 A0FGR8 A0FGR8 254 262 ESYT2 Extended synaptotagmin-2 yes yes 2 0.00075355 164.46 By MS/MS 4 0 1 1 344970 344970 0 15920 6 16863 40494 28558 28558 1 9417.2 0 VYTISDTIAR MFPYPSGKLHMGHVRVYTISDTIARFQKMR MGHVRVYTISDTIARFQKMRGMQVINPMGW R V Y A R F 1 1 0 1 0 0 0 0 0 2 0 0 0 0 0 1 2 0 1 1 0 0 10 0 1137.603 Q15031 Q15031 104 113 LARS2 Probable leucine--tRNA ligase, mitochondrial yes yes 2 4.1572E-05 172.25 By MS/MS By matching 6.62 2.12 2 1 1 1 1 1 1 7 1 16201000 16170000 30148 15921 1467 16864 40495;40496;40497;40498;40499;40500;40501;40502 28559;28560;28561 28559 3 795000 62996 VYTLSVSGDR PRTPCNAGTFSQPEKVYTLSVSGDRLIVGT SQPEKVYTLSVSGDRLIVGTAGRRVLVWDL K V Y D R L 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 2 1 0 1 2 0 0 10 0 1095.556 O43684 O43684 140 149 BUB3 Mitotic checkpoint protein BUB3 yes yes 2 0.0001219 163.16 By MS/MS 8 0 1 1 1065800 1065800 0 15922 216 16865 40503 28562 28562 1 70307 0 VYTPSNADIGLR SSPSSSWTETDVEERVYTPSNADIGLRLKL EERVYTPSNADIGLRLKLHCTPGDGQRFGH R V Y L R L 1 1 1 1 0 0 0 1 0 1 1 0 0 0 1 1 1 0 1 1 0 0 12 0 1304.6725 Q6L8Q7 Q6L8Q7 234 245 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.00074071 143.4 By MS/MS By matching 5.33 0.471 2 1 2 1 20099000 20064000 34593 15923 1687 16866 40504;40505;40506 28563 28563 1 591090 102360 VYTSMSDCLIK DLAKTRLQNQQNGQRVYTSMSDCLIKTVRS NGQRVYTSMSDCLIKTVRSEGYFGMYRGAA R V Y I K T 0 0 0 1 1 0 0 0 0 1 1 1 1 0 0 2 1 0 1 1 0 0 11 0 1315.6152 Q9H936 Q9H936 45 55 SLC25A22 Mitochondrial glutamate carrier 1 yes yes 2 0.0010593 126.31 By MS/MS 8 0 2 2 4052400 4052400 0 15924 2528 16867;16868 40507;40508 28564;28565 28564 1529 2 267330 0 VYVIGSFVDK TADSPNVMTTFRHDKVYVIGSFVDKSMQPG FRHDKVYVIGSFVDKSMQPGTSLAKAKRLN K V Y D K S 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 0 0 1 3 0 0 10 0 1125.607 Q7L0Y3 Q7L0Y3 306 315 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.0040574 130.56 By MS/MS 8.67 1.25 1 1 1 3 12922000 12922000 0 15925 1761 16869 40509;40510;40511 28566;28567 28566 2 392970 0 VYYDGTVEQHPFGEAAYPADGADAGQK VYGHPSHLESEFEMKVYYDGTVEQHPFGEA GEAAYPADGADAGQKHAGAPEDASQEEESV K V Y Q K H 5 0 0 3 0 2 2 4 1 0 0 1 0 1 2 0 1 0 3 2 0 0 27 0 2855.2675 Q7Z4R8 Q7Z4R8 133 159 C6orf120 UPF0669 protein C6orf120 yes yes 3 0.0012245 63.115 By MS/MS 9 0 1 1 764400 764400 0 15926 1796 16870 40512 28568 28568 1 438690 0 WALCSLLR ______________________________ ______________________________ M W A L R S 1 1 0 0 1 0 0 0 0 0 3 0 0 0 0 1 0 1 0 0 0 0 8 0 1017.543 Q9BQ52 Q9BQ52 2 9 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 2 0.034204 76.847 By MS/MS 9 0 1 1 0 0 0 15927 2305 16871 40513 28569 28569 1 0 0 WALSQSNPSALR AEVMNSLAVTMDDFRWALSQSNPSALRETV DFRWALSQSNPSALRETVVEVPQVTWEDIG R W A L R E 2 1 1 0 0 1 0 0 0 0 2 0 0 0 1 3 0 1 0 0 0 0 12 0 1328.6837 P55072 P55072 454 465 VCP Transitional endoplasmic reticulum ATPase yes yes 2 4.6073E-05 166.86 By MS/MS 3.5 0.5 1 1 2 2113700 2113700 0 15928 1026 16872 40514;40515 28570 28570 1 57447 0 WDPTANEDPEWILVEK GDGFVSLEEFLGDYRWDPTANEDPEWILVE DPTANEDPEWILVEKDRFVNDYDKDNDGRL R W D E K D 1 0 1 2 0 0 3 0 0 1 1 1 0 0 2 0 1 2 0 1 0 0 16 0 1940.9156 Q14257 Q14257 217 232 RCN2 Reticulocalbin-2 yes yes 2 2.9174E-15 211.51 By MS/MS 6 0 1 1 7039800 7039800 0 15929 1426 16873 40516 28571 28571 1 54897 0 WDPTANEDPEWILVEKDR GDGFVSLEEFLGDYRWDPTANEDPEWILVE TANEDPEWILVEKDRFVNDYDKDNDGRLDP R W D D R F 1 1 1 3 0 0 3 0 0 1 1 1 0 0 2 0 1 2 0 1 0 0 18 1 2212.0437 Q14257 Q14257 217 234 RCN2 Reticulocalbin-2 yes yes 2 2.6312E-25 251.91 By MS/MS 6 0 1 1 3537300 3537300 0 15930 1426 16874 40517 28572;28573 28572 2 27584 0 WDQSTFLGR ______________________________ NIQEPRWDQSTFLGRARHFFTVTDPRNLLL R W D G R A 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 1 1 1 0 0 0 0 9 0 1108.5302 Q9BWM7 Q9BWM7 15 23 SFXN3 Sideroflexin-3 yes yes 2 0.0027847 135.43 By MS/MS 8 0 1 1 3153900 3153900 0 15931 2397 16875 40518 28574 28574 1 208060 0 WELLQQVDTSTR KVRFLEQQNQVLQTKWELLQQVDTSTRTHN QTKWELLQQVDTSTRTHNLEPYFESFINNL K W E T R T 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 12 0 1474.7416 P04264;CON__P04264 P04264 212 223 KRT1 Keratin, type II cytoskeletal 1 no no 2 7.404E-11 199.12 By MS/MS By MS/MS 4 1.73 1 1 1 1 2 2 3 5 3149700 2714500 435210 + 15932 450;45 16876 40519;40520;40521;40522;40523;40524;40525;40526 28575;28576;28577;28578;28579;28580;28581 28580 7 56083 799710 WFLTCINQPQFR VLEPSFRQAFPNTNRWFLTCINQPQFRAVL TNRWFLTCINQPQFRAVLGEVKLCEKMAQF R W F F R A 0 1 1 0 1 2 0 0 0 1 1 0 0 2 1 0 1 1 0 0 0 0 12 0 1608.7871 P26641 P26641 190 201 EEF1G Elongation factor 1-gamma yes yes 2 2.2663E-07 188.87 By MS/MS 6 0 1 1 13778000 13778000 0 15933 700 16877 40527 28582 28582 1 107440 0 WFQPVANAADAEAVR GAAAAAAGFDSASARWFQPVANAADAEAVR WFQPVANAADAEAVRGAQDVAGGSNPGAHN R W F V R G 5 1 1 1 0 1 1 0 0 0 0 0 0 1 1 0 0 1 0 2 0 0 15 0 1643.8056 O14654 O14654 1162 1176 IRS4 Insulin receptor substrate 4 yes yes 2 0.011904 111.79 By MS/MS 3.5 0.5 1 1 2 668830 668830 0 15934 118 16878 40528;40529 28583 28583 1 17586 0 WGDIEFPPPFGR AAKVDATADYICKVKWGDIEFPPPFGREAY KVKWGDIEFPPPFGREAYPEEAYIADLDAK K W G G R E 0 1 0 1 0 0 1 2 0 1 0 0 0 2 3 0 0 1 0 0 0 0 12 0 1416.6826 P53396 P53396 233 244 ACLY ATP-citrate synthase yes yes 2 0.021531 84.17 By MS/MS 4 0 1 1 106260 106260 0 15935 1001 16879 40530 28584 28584 1 2900.9 0 WIGLDLSNGKPR FHNEAQVNPERKNLKWIGLDLSNGKPRDNK NLKWIGLDLSNGKPRDNKQAGVFEPTIVKV K W I P R D 0 1 1 1 0 0 0 2 0 1 2 1 0 0 1 1 0 1 0 0 0 0 12 1 1354.7357 P17987 P17987 485 496 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.0011324 154.85 By MS/MS 6.5 0.5 1 1 2 5573400 5573400 0 15936 619 16880 40531;40532 28585 28585 1 46966 0 WISDWNLTTEK GAIQYIPTELDQVRKWISDWNLTTEKKHTL QVRKWISDWNLTTEKKHTLLRLLYEALVDC K W I E K K 0 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 2 2 0 0 0 0 11 0 1391.6721 Q7L2H7 Q7L2H7 150 160 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 0.0019728 120.63 By MS/MS 7 0 1 1 889990 889990 0 15937 1764 16881 40533 28586 28586 1 15904 0 WIVNLIR MLADKLNMTPEEAERWIVNLIRNARLDAKI MTPEEAERWIVNLIRNARLDAKIDSKLGHV R W I I R N 0 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 1 0 0 7 0 912.55452 P60228 P60228 370 376 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 0.015981 137.44 By MS/MS 6.5 0.5 1 1 2 5441200 5441200 0 15938 1065 16882 40534;40535 28587 28587 1 43217 0 WSSLACNIALDAVK LNIINSSITTKAISRWSSLACNIALDAVKM RWSSLACNIALDAVKMVQFEENGRKEIDIK R W S V K M 3 0 1 1 1 0 0 0 0 1 2 1 0 0 0 2 0 1 0 1 0 0 14 0 1546.7814 P49368 P49368 168 181 CCT3 T-complex protein 1 subunit gamma yes yes 2 9.9847E-06 205.31 By MS/MS 6.33 0.471 2 1 3 51807000 51807000 0 15939 916 16883 40536;40537;40538 28588;28589;28590;28591 28588 4 409060 0 WTCCALLAGSEYLK VIATELKNNSYKLARWTCCALLAGSEYLKL RWTCCALLAGSEYLKLGYVSRYHVKDSSRH R W T L K L 2 0 0 0 2 0 1 1 0 0 3 1 0 0 0 1 1 1 1 0 0 0 14 0 1670.7796 O15371 O15371 435 448 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 0.001246 142.89 By MS/MS 6 0 1 1 836120 836120 0 15940 172 16884 40539 28592 28592 0 6520.1 0 WTLLQEQGTK KVRFLEQQNKVLDTKWTLLQEQGTKTVRQN VLDTKWTLLQEQGTKTVRQNLEPLFEQYIN K W T T K T 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1202.6295 CON__P02538;P02538;CON__P48668;P48668;P04259;CON__P13647;P13647 CON__P13647 200 209 KRT6A;KRT6C;KRT6B;KRT5 Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5 no no 2 0.015093 95.775 By MS/MS 6 0.816 1 1 1 3 228790 0 228790 + 15941 50;36;53;449 16885 40540;40541;40542 28593;28594;28595 28593 3 0 788090 WTSQDSLLGMEFSGR MLATGKLSPDAIPGKWTSQDSLLGMEFSGR WTSQDSLLGMEFSGRDASGKRVMGLVPAKG K W T G R D 0 1 0 1 0 1 1 2 0 0 2 0 1 1 0 3 1 1 0 0 0 0 15 0 1712.7828 P49327 P49327 1592 1606 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 5.9981E-15 210.38 By MS/MS 3 0 1 1 295110 295110 0 15942 915 16886 40543 28596 28596 666 1 7703.9 0 WVFKEEGVLR YSQTGNYELAVALSRWVFKEEGVLRVGPVS VALSRWVFKEEGVLRVGPVSHHRVGETAPP R W V L R V 0 1 0 0 0 0 2 1 0 0 1 1 0 1 0 0 0 1 0 2 0 0 10 1 1261.6819 P39656 P39656 298 307 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 3 0.0027318 104.22 By MS/MS 6 0 1 1 3370800 3370800 0 15943 825 16887 40544 28597 28597 1 26286 0 WVGGPEIELIAIATGGR EANHLLLQNNLPAVRWVGGPEIELIAIATG GGPEIELIAIATGGRIVPRFSELTAEKLGF R W V G R I 2 1 0 0 0 0 2 4 0 3 1 0 0 0 1 0 1 1 0 1 0 0 17 0 1737.9414 P48643 P48643 324 340 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 1.5537E-06 181.98 By MS/MS 6 0 2 2 4820300 4820300 0 15944 909 16888 40545;40546 28598;28599;28600 28598 3 37589 0 WVGVILDEAK GTVAYVGATLFATGKWVGVILDEAKGKNDG FATGKWVGVILDEAKGKNDGTVQGRKYFTC K W V A K G 1 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 1 0 2 0 0 10 0 1128.6179 Q14203 Q14203 57 66 DCTN1 Dynactin subunit 1 yes yes 2 0.0060521 104.01 By MS/MS 3 0 1 1 626110 626110 0 15945 1420 16889 40547 28601 28601 1 16345 0 WVPFDGDDIQLEFVR LVEYSIVIQQLSNGKWVPFDGDDIQLEFVR WVPFDGDDIQLEFVRIDPFVRTFLKKKGGK K W V V R I 0 1 0 3 0 1 1 1 0 1 1 0 0 2 1 0 0 1 0 2 0 0 15 0 1834.889 P39656 P39656 345 359 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 0.00016182 134.56 By MS/MS 6 0 1 1 711420 711420 0 15946 825 16890 40548 28602 28602 1 5547.7 0 YAACNAVGQMATDFAPGFQK NFVLLFLQDPHPRVRYAACNAVGQMATDFA AVGQMATDFAPGFQKKFHEKVIAALLQTME R Y A Q K K 5 0 1 1 1 2 0 2 0 0 0 1 1 2 1 0 1 0 1 1 0 0 20 0 2145.9612 O00410 O00410 417 436 IPO5 Importin-5 yes yes 2 2.5314E-08 150.9 By MS/MS 4.5 0.5 1 1 2 846040 846040 0 15947 91 16891 40549;40550 28603 28603 62 1 25418 0 YAADINSR TVCQFITATEMTLQRYAADINSRLIRQVER TEMTLQRYAADINSRLIRQVERLKQEAVTV R Y A S R L 2 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 8 0 908.43519 Q96Q15 Q96Q15 2713 2720 SMG1 Serine/threonine-protein kinase SMG1 yes yes 2 0.035728 96.948 By MS/MS 1.5 0.5 1 1 2 278630 278630 0 15948 2241 16892 40551;40552 28604 28604 1 13688 0 YAALSVDGEDENEGEDYAE KPEENPASKFSSASKYAALSVDGEDENEGE SVDGEDENEGEDYAE_______________ K Y A A E - 3 0 1 3 0 0 5 2 0 0 1 0 0 0 0 1 0 0 2 1 0 0 19 0 2074.8127 P23588 P23588 593 611 EIF4B Eukaryotic translation initiation factor 4B yes yes 2 0.0014162 107.46 By MS/MS By matching 5 0 2 1 1 1324600 1187700 136890 15949 672 16893 40553;40554 28605 28605 1 48821 405060 YAALYQPLFDK IEAKFYEEVHDLERKYAALYQPLFDKRREF LERKYAALYQPLFDKRREFITGDVEPTDAE K Y A D K R 2 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 0 0 0 11 0 1327.6812 Q99733 Q99733 95 105 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 2 8.6022E-05 163.94 By MS/MS 6 0 1 1 734990 734990 0 15950 2288 16894 40555 28606 28606 1 5731.5 0 YADEEIPR TYTPSQEGPYMVSVKYADEEIPRSPFKVKV PYMVSVKYADEEIPRSPFKVKVLPTYDASK K Y A P R S 1 1 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 8 0 991.46108 O75369 O75369 1497 1504 FLNB Filamin-B yes yes 2 0.010309 119.29 By MS/MS 2 0 1 1 182020 182020 0 15951 300 16895 40556 28607 28607 1 9047.4 0 YADLLLEKETLK DVQRQQEREKELQHRYADLLLEKETLKSKF QHRYADLLLEKETLKSKF____________ R Y A L K S 1 0 0 1 0 0 2 0 0 0 4 2 0 0 0 0 1 0 1 0 0 0 12 1 1434.797 Q99459 Q99459 788 799 CDC5L Cell division cycle 5-like protein yes yes 3 0.033722 67.252 By MS/MS 4 0 1 1 731830 731830 0 15952 2267 16896 40557 28608 28608 1 19978 0 YADVIIPR FVKPAFEEFCLPTKKYADVIIPRGADNLVA FCLPTKKYADVIIPRGADNLVAINLIVQHI K Y A P R G 1 1 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 1 1 0 0 8 0 945.52837 Q9BZX2;Q9HA47 Q9BZX2 203 210 UCK2;UCK1 Uridine-cytidine kinase 2;Uridine-cytidine kinase 1 yes no 2 0.017601 109.86 By MS/MS 8 0 1 1 5058600 5058600 0 15953 2428 16897 40558 28609 28609 1 333710 0 YADVIVHR LASPIYTHFTSPIRRYADVIVHRLLAVAIG FTSPIRRYADVIVHRLLAVAIGADCTYPEL R Y A H R L 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 2 0 0 8 0 971.51886 Q9Y2L1 Q9Y2L1 782 789 DIS3 Exosome complex exonuclease RRP44 yes yes 3 0.030473 107.66 By MS/MS 4 0 1 1 1133400 1133400 0 15954 2892 16898 40559 28610 28610 1 30941 0 YAEEDRR LSKDDIENMVKNAEKYAEEDRRKKERVEAV NMVKNAEKYAEEDRRKKERVEAVNMAEGII K Y A R R K 1 2 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 7 1 937.42536 P38646 P38646 568 574 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.045147 149.4 By MS/MS 5.5 0.5 1 1 2 1764000 1764000 0 15955 820 16899 40560;40561 28611 28611 1 44957 0 YAEERDRAEAEAR KFDQLLAEEKTISAKYAEERDRAEAEAREK AKYAEERDRAEAEAREKETKALSLARALEE K Y A A R E 4 3 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 13 2 1564.723 P35580;P35579 P35579 1460 1472 MYH10;MYH9 Myosin-10;Myosin-9 no no 3 0.013241 110.64 By MS/MS 2 0.816 1 1 1 3 770590 770590 0 15956 793;794 16900 40562;40563;40564 28612 28612 1 31258 0 YAEKLIQEGK DQFTYTSDHFETIMKYAEKLIQEGKAYVDD ETIMKYAEKLIQEGKAYVDDTPAEQMKAER K Y A G K A 1 0 0 0 0 1 2 1 0 1 1 2 0 0 0 0 0 0 1 0 0 0 10 1 1177.6343 P07814 P07814 279 288 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2;3 0.018 136.52 By MS/MS 3 0 2 2 248780 248780 0 15957 493 16901 40565;40566 28613;28614 28614 2 6494.5 0 YAELLLIPK LGAMKSLSALLGCSKYAELLLIPKVLAENG LLGCSKYAELLLIPKVLAENGHNSDCASSP K Y A P K V 1 0 0 0 0 0 1 0 0 1 3 1 0 0 1 0 0 0 1 0 0 0 9 0 1058.6376 Q15751 Q15751 2528 2536 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 2 0.01057 103.56 By MS/MS 1 0 1 1 45879 45879 0 15958 1517 16902 40567 28615 28615 1 2241.6 0 YAFDFAR RSQLNDISSFKNIYRYAFDFARDKDQRSLD SSFKNIYRYAFDFARDKDQRSLDIDTAKSM R Y A A R D 2 1 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 7 0 888.413 Q9BTE7;Q92564 Q9BTE7 144 150 DCUN1D5;DCUN1D4 DCN1-like protein 5;DCN1-like protein 4 yes no 2 0.036253 110.63 By MS/MS 8.5 0.5 1 1 2 1000100 1000100 0 15959 2351 16903 40568;40569 28616 28616 1 432680 0 YAFGQETNVPLNNFSADQVTR LIRECSDVQPKLWARYAFGQETNVPLNNFS TNVPLNNFSADQVTRALENVLSGKA_____ R Y A T R A 2 1 3 1 0 2 1 1 0 0 1 0 0 2 1 1 2 0 1 2 0 0 21 0 2370.124 O43678 O43678 69 89 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 2 0.029901 60.968 By MS/MS 10 0 1 1 122180 122180 0 15960 213 16904 40570 28617 28617 1 129860 0 YAHQSGFHVDR YGHILAGTIKDIVTRYAHQSGFHVDRRFGW IVTRYAHQSGFHVDRRFGWDCHGLPVEYEI R Y A D R R 1 1 0 1 0 1 0 1 2 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1315.6058 P41252 P41252 71 81 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 3 0.0051082 98.898 By MS/MS 3.5 0.5 1 1 2 1488300 1488300 0 15961 840 16905 40571;40572 28618 28618 1 38942 0 YAHVVLR KIAFAITAIKGVGRRYAHVVLRKADIDLTK AIKGVGRRYAHVVLRKADIDLTKRAGELTE R Y A L R K 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 7 0 856.49192 P62269 P62269 40 46 RPS18 40S ribosomal protein S18 yes yes 2 0.020123 126.05 By MS/MS 9.5 0.5 1 1 2 4025600 4025600 0 15962 1124 16906 40573;40574 28619;28620 28619 2 2864600 0 YAIAVNDLGTEYVHR TKVPFCLQSCVKPLKYAIAVNDLGTEYVHR YAIAVNDLGTEYVHRYVGKEPSGLRFNKLF K Y A H R Y 2 1 1 1 0 0 1 1 1 1 1 0 0 0 0 0 1 0 2 2 0 0 15 0 1719.858 O94925 O94925 293 307 GLS Glutaminase kidney isoform, mitochondrial yes yes 3 0.022559 70.628 By MS/MS 6 0 1 1 17455000 17455000 0 15963 359 16907 40575 28621 28621 1 136120 0 YAIGSLNEGR VPEANILGQIGHGYKYAIGSLNEGRIGIAA GHGYKYAIGSLNEGRIGIAAQMLGLAQGCF K Y A G R I 1 1 1 0 0 0 1 2 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1078.5407 P45954 P45954 285 294 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 0.00013862 161.27 By MS/MS 7 0 1 1 6232700 6232700 0 15964 871 16908 40576 28622 28622 1 111380 0 YALLLQELAR DLASYLLKPIQRMGKYALLLQELARACGGP QRMGKYALLLQELARACGGPTQELSALREA K Y A A R A 2 1 0 0 0 1 1 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 10 0 1188.6867 Q58EX7 Q58EX7 870 879 PLEKHG4 Puratrophin-1 yes yes 2 0.0089964 100.02 By MS/MS 3 0 1 1 51111 51111 0 15965 1596 16909 40577 28623 28623 1 1334.3 0 YALTGDEVK RECLPLIIFLRNRLKYALTGDEVKKICMQR LRNRLKYALTGDEVKKICMQRFIKIDGKVR K Y A V K K 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 9 0 994.49713 P62701;Q8TD47;P22090 P62701 54 62 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.0051036 115.49 By MS/MS By matching 8 0 2 1 1 4132600 4079800 52754 15966 1140 16910 40578;40579 28624 28624 1 269150 450060 YALTGDEVKK RECLPLIIFLRNRLKYALTGDEVKKICMQR RNRLKYALTGDEVKKICMQRFIKIDGKVRT K Y A K K I 1 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 1 1 0 0 10 1 1122.5921 P62701;Q8TD47;P22090 P62701 54 63 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2;3 0.011611 125.71 By MS/MS 8.33 0.471 2 1 3 4864600 4864600 0 15967 1140 16911 40580;40581;40582 28625;28626 28626 2 351460 0 YALYDASFETK PFKHFVGMLPEKDCRYALYDASFETKESRK KDCRYALYDASFETKESRKEELMFFLWAPE R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 0 2 0 0 0 11 0 1306.6081 P60981 P60981 82 92 DSTN Destrin yes yes 2 6.693E-06 175.93 By MS/MS 10 0 1 1 596260 596260 0 15968 1079 16912 40583 28627 28627 1 633760 0 YALYDATYETK PYATFVKMLPDKDCRYALYDATYETKESKK KDCRYALYDATYETKESKKEDLVFIFWAPE R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 0 11 0 1336.6187 P23528;Q9Y281 P23528 82 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 4.2876E-07 188.04 By MS/MS By MS/MS 9.67 0.471 1 2 2 1 5346800 5291100 55693 15969 671 16913 40584;40585;40586 28628;28629;28630;28631 28631 4 4675500 1428500 YANEVNSDAGAFK KKWSEALVLYDRVLKYANEVNSDAGAFKNS LKYANEVNSDAGAFKNSLKDLPDVQELITQ K Y A F K N 3 0 2 1 0 0 1 1 0 0 0 1 0 1 0 1 0 0 1 1 0 0 13 0 1384.6259 Q9UHB9 Q9UHB9 492 504 SRP68 Signal recognition particle subunit SRP68 yes yes 2 0.00014015 152.69 By MS/MS 5.5 0.5 1 1 2 7300700 7300700 0 15970 2779 16914 40587;40588 28632 28632 1 268500 0 YAQAGFEGFK FGSEEQLLPVEKLPKYAQAGFEGFKTLNRI EKLPKYAQAGFEGFKTLNRIQSKLYRAALE K Y A F K T 2 0 0 0 0 1 1 2 0 0 0 1 0 2 0 0 0 0 1 0 0 0 10 0 1116.524 O75643 O75643 470 479 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0066493 102.06 By MS/MS 1.5 0.5 1 1 2 1534700 1534700 0 15971 322 16915 40589;40590 28633 28633 1 75428 0 YAQTQGTGGKK LIWNKDPEATEKLLRYAQTQGTGGKKVIQT KLLRYAQTQGTGGKKVIQTDEWRNGPVEER R Y A K K V 1 0 0 0 0 2 0 3 0 0 0 2 0 0 0 0 2 0 1 0 0 0 11 1 1137.5778 Q99707 Q99707 649 659 MTR Methionine synthase yes yes 2 0.0025895 138.08 By MS/MS 3 0 1 1 50072 50072 0 15972 2284 16916 40591 28634 28634 1 1307.1 0 YASENVNK ESYANVKQWLQEIDRYASENVNKLLVGNKS WLQEIDRYASENVNKLLVGNKSDLTTKKVV R Y A N K L 1 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 8 0 923.43486 P62820;Q9H0U4 Q9H0U4 109 116 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 2 0.0015047 164.72 By MS/MS By matching 9 0.707 1 2 1 2 2 1362300 1340200 22084 15973 1145;2459 16917 40592;40593;40594;40595 28635 28635 1 778330 209720 YASWAASQINR SNPKASAKTKKDNMKYASWAASQINRAYQF DNMKYASWAASQINRAYQFAGRSKKETKYS K Y A N R A 3 1 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 1 0 0 0 11 0 1265.6153 Q15006 Q15006 256 266 EMC2 ER membrane protein complex subunit 2 yes yes 2 0.00010431 161.17 By MS/MS By matching 5 2 1 1 1 1 1 1 1 1 6 965190 739550 225640 15974 1459 16918 40596;40597;40598;40599;40600;40601;40602 28636 28636 1 48788 543390 YATALYSAASK KLVRPPVQVYGIEGRYATALYSAASKQNKL IEGRYATALYSAASKQNKLEQVEKELLRVA R Y A S K Q 4 0 0 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 11 0 1144.5764 P48047 P48047 41 51 ATP5O ATP synthase subunit O, mitochondrial yes yes 2 2.3817E-07 191.4 By MS/MS 9.5 0.5 1 1 2 36906000 36906000 0 15975 900 16919 40603;40604 28637;28638 28637 2 21297000 0 YATGENTVFVDTK FCSIEGEWNGVMYAKYATGENTVFVDTKKL AKYATGENTVFVDTKKLPIIKKKVRKLEDQ K Y A T K K 1 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 3 0 1 2 0 0 13 0 1443.6882 Q96SU4 Q96SU4 633 645 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 2 1.1307E-07 209.19 By MS/MS 4 0 1 1 1458500 1458500 0 15976 2257 16920 40605 28639 28639 1 39816 0 YATLATVSR LPPNVRIMFEVQDLKYATLATVSRCGMVWF EVQDLKYATLATVSRCGMVWFSEDVLSTDM K Y A S R C 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 1 1 0 0 9 0 980.5291 Q14204 Q14204 2350 2358 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 2.504E-06 186.76 By MS/MS 1.5 0.5 1 1 2 2309700 2309700 0 15977 1421 16921 40606;40607 28640;28641 28640 2 113300 0 YAVLYQPLFDK IEAKFYEEVHDLERKYAVLYQPLFDKRFEI LERKYAVLYQPLFDKRFEIINAIYEPTEEE K Y A D K R 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 1 0 0 11 0 1355.7125 P55209 P55209 106 116 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2 0.00031973 150.08 By MS/MS 6 0 1 1 4504200 4504200 0 15978 1030 16922 40608 28642 28642 1 35124 0 YAVLYQPLFDKR IEAKFYEEVHDLERKYAVLYQPLFDKRFEI ERKYAVLYQPLFDKRFEIINAIYEPTEEEC K Y A K R F 1 1 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 1 0 0 12 1 1511.8136 P55209 P55209 106 117 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 2;3 0.012227 118.03 By MS/MS 6 0 2 2 7776200 7776200 0 15979 1030 16923 40609;40610 28643;28644 28643 2 60639 0 YAVNVALQK QESLSVLRSSNEFMRYAVNVALQKVQQLKE SNEFMRYAVNVALQKVQQLKETGHVSGPDG R Y A Q K V 2 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 2 0 0 9 0 1004.5655 Q9NVI1 Q9NVI1 841 849 FANCI Fanconi anemia group I protein yes yes 2 0.0023712 125.81 By MS/MS 3 0 1 1 614820 614820 0 15980 2654 16924 40611 28645 28645 1 16050 0 YAVTTGDHGIIR DESGVFIYTTSNHIKYAVTTGDHGIIRTLD HIKYAVTTGDHGIIRTLDLPIYVTRVKGNN K Y A I R T 1 1 0 1 0 0 0 2 1 2 0 0 0 0 0 0 2 0 1 1 0 0 12 0 1301.6728 P53621 P53621 551 562 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 2.1635E-07 189.18 By MS/MS 2.6 1.02 1 1 2 1 5 5216400 5216400 0 15981 1005 16925 40612;40613;40614;40615;40616 28646;28647;28648;28649 28646 4 156870 0 YAYTGECR MATNTVYVFAKKDSKYAYTGECRSCLENSS FAKKDSKYAYTGECRSCLENSSRPTSTIWV K Y A C R S 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 2 0 0 0 8 0 1018.4178 P30876 P30876 215 222 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 2 0.044688 93.429 By MS/MS 3.5 0.5 1 1 2 620600 620600 0 15982 748 16926 40617;40618 28650 28650 1 16330 0 YAYYDTER PGRTMGVMFTPLTVKYAYYDTERIGVDLIM FTPLTVKYAYYDTERIGVDLIMKTCFSPNR K Y A E R I 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 8 0 1079.456 O00303 O00303 239 246 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 2 0.01022 119.41 By MS/MS 7.5 1.12 1 1 1 1 4 29061000 29061000 0 15983 88 16927 40619;40620;40621;40622 28651;28652 28651 2 480680 0 YCALLLPLLK EFPLQQMDSPLDSSRYCALLLPLLKAWSPV LDSSRYCALLLPLLKAWSPVFRNYIKRAAD R Y C L K A 1 0 0 0 1 0 0 0 0 0 5 1 0 0 1 0 0 0 1 0 0 0 10 0 1202.7097 Q13144 Q13144 617 626 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 2 0.0059193 104.45 By MS/MS 5.5 0.5 1 1 2 113360 113360 0 15984 1339 16928 40623;40624 28653;28654 28653 2 1904.4 0 YCAQDAFFQVK CIGGGVDLVTACDIRYCAQDAFFQVKEVDV CDIRYCAQDAFFQVKEVDVGLAADVGTLQR R Y C V K E 2 0 0 1 1 2 0 0 0 0 0 1 0 2 0 0 0 0 1 1 0 0 11 0 1375.6231 Q13011 Q13011 186 196 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 2 0.00055208 166.66 By MS/MS 8 0 1 1 2182600 2182600 0 15985 1324 16929 40625 28655 28655 1 143990 0 YCDPVVLTYQAER TEFELRKHARQEGRRYCDPVVLTYQAERMP RRYCDPVVLTYQAERMPEQIRLKVGGVDPK R Y C E R M 1 1 0 1 1 1 1 0 0 0 1 0 0 0 1 0 1 0 2 2 0 0 13 0 1612.7555 A5YKK6 A5YKK6 1540 1552 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 2 0.0013821 126.66 By MS/MS By matching 2.33 0.471 2 1 2 1 388780 362610 26176 15986 19 16930 40626;40627;40628 28656 28656 1 13649 22038 YCFPNYVGR SGVIKAGFAGDQIPKYCFPNYVGRPKHVRV GDQIPKYCFPNYVGRPKHVRVMAGALEGDI K Y C G R P 0 1 1 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 2 1 0 0 9 0 1174.523 P42025;P61163 P61163 33 41 ACTR1B;ACTR1A Beta-centractin;Alpha-centractin no no 2 0.037807 101.28 By MS/MS 7 0 1 1 1822900 1822900 0 15987 1090;843 16931 40629 28657 28657 1 32576 0 YCIFDLATGK SKGVHAVLKTGNWVRYCIFDLATGKAEQEN GNWVRYCIFDLATGKAEQENNFPTSSIAFL R Y C G K A 1 0 0 1 1 0 0 1 0 1 1 1 0 1 0 0 1 0 1 0 0 0 10 0 1186.5692 O95071 O95071 768 777 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 2 0.00040919 148.52 By MS/MS 2.5 1.12 1 1 1 1 4 1564400 1564400 0 15988 364 16932 40630;40631;40632;40633 28658;28659;28660;28661 28660 4 57395 0 YCVEEEEKAAEMHK AFVNTRKDFQKDFVKYCVEEEEKAAEMHKM KYCVEEEEKAAEMHKMKSTTQANRMSVDAV K Y C H K M 2 0 0 0 1 0 5 0 1 0 0 2 1 0 0 0 0 0 1 1 0 0 14 1 1751.7495 P78347 P78347 79 92 GTF2I General transcription factor II-I yes yes 3 0.007938 83.087 By MS/MS 3 0 1 1 1268400 1268400 0 15989 1194 16933 40634 28662 28662 1 33113 0 YDDAIQLYDR RVKRLTGMRFEAMERYDDAIQLYDRILQED EAMERYDDAIQLYDRILQEDPTNTAARKRK R Y D D R I 1 1 0 3 0 1 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 0 10 0 1270.583 Q15006 Q15006 103 112 EMC2 ER membrane protein complex subunit 2 yes yes 2 0.00054013 143.4 By MS/MS 8 0 1 1 1310300 1310300 0 15990 1459 16934 40635 28663 28663 1 86437 0 YDDPEVQKDIK PNNTFYATKRLIGRRYDDPEVQKDIKNVPF IGRRYDDPEVQKDIKNVPFKIVRASNGDAW R Y D I K N 0 0 0 3 0 1 1 0 0 1 0 2 0 0 1 0 0 0 1 1 0 0 11 1 1348.6511 P38646 P38646 128 138 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0014462 155.11 By MS/MS By matching 5 0 2 1 1 4722200 4700100 22141 15991 820 16935 40636;40637 28664 28664 1 193190 65516 YDEEFQR LKSQICDNAALYAQKYDEEFQRYLPRFVTA NAALYAQKYDEEFQRYLPRFVTAIWNLLVT K Y D Q R Y 0 1 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 7 0 985.41412 P55060 P55060 282 288 CSE1L Exportin-2 yes yes 2 0.0085143 158.36 By MS/MS 4.5 0.5 1 1 2 2894800 2894800 0 15992 1025 16936 40638;40639 28665 28665 1 81423 0 YDESDNAFIR ENNVVFNRFFEMKMKYDESDNAFIRASRAL EMKMKYDESDNAFIRASRALTDKVTDLLGG K Y D I R A 1 1 1 2 0 0 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 10 0 1228.536 O43615 O43615 265 274 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2 0.00036248 150.35 By MS/MS 7.5 0.5 1 1 2 16056000 16056000 0 15993 209 16937 40640;40641 28666 28666 1 332670 0 YDFTSSR YLLFYFRVPFIYGHKYDFTSSRHTVVHLAC VPFIYGHKYDFTSSRHTVVHLACICHSFHY K Y D S R H 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 2 1 0 1 0 0 0 7 0 874.3821 Q9NZ01 Q9NZ01 117 123 TECR Very-long-chain enoyl-CoA reductase yes yes 2 0.045549 104.21 By MS/MS 2 0.816 1 1 1 3 2038400 2038400 0 15994 2703 16938 40642;40643;40644 28667 28667 1 92734 0 YDGEDLAYTVK LEMEEETSGYGFKPKYDGEDLAYTVKNLRR FKPKYDGEDLAYTVKNLRRSTKYKFKVIAY K Y D V K N 1 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 1 0 2 1 0 0 11 0 1272.5874 Q9Y2H6 Q9Y2H6 518 528 FNDC3A Fibronectin type-III domain-containing protein 3A yes yes 2 0.0001303 157.78 By MS/MS 4 0.816 1 1 1 3 1826600 1826600 0 15995 2887 16939 40645;40646;40647 28668 28668 1 52644 0 YDGIILPGK HRISKEEAMRWFQQKYDGIILPGK______ RWFQQKYDGIILPGK_______________ K Y D G K - 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 0 0 0 1 0 0 0 9 0 974.54368 P62913 P62913 170 178 RPL11 60S ribosomal protein L11 yes yes 2 0.0018868 131.03 By MS/MS 9 0 1 1 2799000 2799000 0 15996 1161 16940 40648 28669 28669 1 1606300 0 YDGQVAVFGSDLQEK KEVLTEDKCLQRQNRYDGQVAVFGSDLQEK YDGQVAVFGSDLQEKLGKQKYFLVGAGAIG R Y D E K L 1 0 0 2 0 2 1 2 0 0 1 1 0 1 0 1 0 0 1 2 0 0 15 0 1654.7839 P22314 P22314 451 465 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 1.5961E-38 264.28 By MS/MS 4.5 0.5 1 1 2 1034700 1034700 0 15997 658 16941 40649;40650 28670 28670 1 29987 0 YDLSALVR EKEDLLCGATDGKKRYDLSALVRHAEPEQN ATDGKKRYDLSALVRHAEPEQNWEAVDGSQ R Y D V R H 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 8 0 935.50763 P11717 P11717 484 491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.035728 106.36 By MS/MS 3 0.816 1 1 1 3 317110 317110 0 15998 557 16942 40651;40652;40653 28671 28671 1 10951 0 YDLSPITVK AYSHTGRIIPAIWFRYDLSPITVKYTERRQ PAIWFRYDLSPITVKYTERRQPLYRFITTI R Y D V K Y 0 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 1 0 1 1 0 0 9 0 1034.5648 Q969X5 Q969X5 233 241 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2 0.0010788 140.35 By MS/MS 8 0 1 1 4672700 4672700 0 15999 2110 16943 40654 28672 28672 1 308260 0 YDSNSGGER SIVFIDEIDAIGTKRYDSNSGGEREIQRTM AIGTKRYDSNSGGEREIQRTMLELLNQLDG R Y D E R E 0 1 1 1 0 0 1 2 0 0 0 0 0 0 0 2 0 0 1 0 0 0 9 0 983.39445 P62191 P62191 295 303 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.0348 88.37 By MS/MS 6 0 1 1 379620 379620 0 16000 1116 16944 40655 28673 28673 1 2960.3 0 YDTVLDILR CNSMVLFDHVGCLKKYDTVLDILRDFFELR VGCLKKYDTVLDILRDFFELRLKYYGLRKE K Y D L R D 0 1 0 2 0 0 0 0 0 1 2 0 0 0 0 0 1 0 1 1 0 0 9 0 1106.5972 P11388 P11388 1012 1020 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0091407 106.68 By MS/MS 3 0 1 1 73140 73140 0 16001 553 16945 40656 28674 28674 1 1909.3 0 YDVLICR MVNKVLVRHRINHQRYDVLICRIVKGYTLA RHRINHQRYDVLICRIVKGYTLADEEEDPL R Y D C R I 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 7 0 937.46914 P42345 P42345 1209 1215 MTOR Serine/threonine-protein kinase mTOR yes yes 2 0.043839 105.39 By MS/MS 2 0 1 1 450910 450910 0 16002 849 16946 40657 28675 28675 1 22413 0 YDWDLLAAR ITWNRKKLGEFFQTKYDWDLLAARSIWAFG EFFQTKYDWDLLAARSIWAFGPDATGPNIL K Y D A R S 2 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 9 0 1121.5506 Q15029 Q15029 722 730 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 2 8.5955E-05 171.53 By MS/MS 3.5 0.5 1 1 2 1185700 1185700 0 16003 1466 16947 40658;40659 28676 28676 1 32278 0 YDYNPSFAIR DILIEHYKYPEGIRKYDYNPSFAIRGLHYD EGIRKYDYNPSFAIRGLHYDIQKSLLMKID K Y D I R G 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 0 10 0 1244.5826 Q9H857 Q9H857 110 119 NT5DC2 5-nucleotidase domain-containing protein 2 yes yes 2 0.001052 120.45 By MS/MS 6 0 1 1 3640900 3640900 0 16004 2522 16948 40660 28677 28677 1 28392 0 YDYNSGEELESYK KEFLVAGGEDFKLYKYDYNSGEELESYKGH YKYDYNSGEELESYKGHFGPIHCVRFSPDG K Y D Y K G 0 0 1 1 0 0 3 1 0 0 1 1 0 0 0 2 0 0 3 0 0 0 13 0 1595.6627 Q9Y3F4 Q9Y3F4 250 262 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 8.8521E-46 272.65 By MS/MS 7.5 0.5 1 1 2 3128700 3128700 0 16005 2937 16949 40661;40662 28678 28678 1 75930 0 YEAAGTLVTLSSAPTAIK RCIYNLLQSSSPAVKYEAAGTLVTLSSAPT AGTLVTLSSAPTAIKAAAQCYIDLIIKESD K Y E I K A 4 0 0 0 0 0 1 1 0 1 2 1 0 0 1 2 3 0 1 1 0 0 18 0 1791.9618 P53618 P53618 262 279 COPB1 Coatomer subunit beta yes yes 2;3 3.0421E-55 274.39 By MS/MS 4.86 1.25 1 2 2 1 1 7 20915000 20915000 0 16006 1004 16950 40663;40664;40665;40666;40667;40668;40669 28679;28680;28681 28679 3 574460 0 YEATSVQQK DLVIRLRRPPLRYPRYEATSVQQKVNFSEE PLRYPRYEATSVQQKVNFSEEGETEEDDQD R Y E Q K V 1 0 0 0 0 2 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 0 9 0 1052.5138 Q5JTV8 Q5JTV8 203 211 TOR1AIP1 Torsin-1A-interacting protein 1 yes yes 2 4.3346E-07 194.29 By MS/MS 6 0.816 1 1 1 3 3106100 3106100 0 16007 1610 16951 40670;40671;40672 28682 28682 1 28806 0 YEDAVQFIR APVLVALALIECGMKYEDAVQFIRQKRRGA IECGMKYEDAVQFIRQKRRGAFNSKQLLYL K Y E I R Q 1 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 9 0 1139.5611 Q93096;Q12974 Q12974 123 131 PTP4A1;PTP4A2 Protein tyrosine phosphatase type IVA 1;Protein tyrosine phosphatase type IVA 2 no no 2 0.0027128 122.13 By MS/MS 9.5 0.5 1 1 2 236010 236010 0 16008 1320;2099 16952 40673;40674 28683;28684 28684 2 250860 0 YEDEINKR ELKNMQDMVEDYRNKYEDEINKRTNAENEF VEDYRNKYEDEINKRTNAENEFVTIKKDVD K Y E K R T 0 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 1065.5091 P04264;CON__H-INV:HIT000016045;CON__P04264;CON__P35908v2;CON__P35908;P35908;CON__P02538;P02538;CON__O95678;O95678;CON__Q8VED5;CON__P05787;P05787;CON__P48668;P48668;P04259;CON__Q5XQN5;CON__P13647;P13647;CON__ENSEMBL:ENSBTAP00000038253;CON__Q7Z794;Q7Z794 P04264 270 277 KRT1;KRT2;KRT6A;KRT75;KRT8;KRT6C;KRT6B;KRT5;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 1b no no 2 0.025647 131.04 By matching By MS/MS 7 2 1 1 1 1 1 1 1 2 5 1709400 573000 1136400 + 16009 450;45;52;50;36;53;449;61;32;63 16953 40675;40676;40677;40678;40679;40680;40681 28685;28686;28687;28688 28685 4 475130 3658300 YEDFGPLFTAK KYVEFMKDNYPPSFKYEDFGPLFTAKFFNA PSFKYEDFGPLFTAKFFNANQWADIFQASG K Y E A K F 1 0 0 1 0 0 1 1 0 0 1 1 0 2 1 0 1 0 1 0 0 0 11 0 1286.6183 Q9BTY2 Q9BTY2 100 110 FUCA2 Plasma alpha-L-fucosidase yes yes 2 0.0010651 132.78 By MS/MS 6 0 1 1 3158000 3158000 0 16010 2356 16954 40682 28689 28689 1 24626 0 YEDFSNLGTTHLLR SPVSRIGLFIKAGSRYEDFSNLGTTHLLRL RYEDFSNLGTTHLLRLTSSLTTKGASSFKI R Y E L R L 0 1 1 1 0 0 1 1 1 0 3 0 0 1 0 1 2 0 1 0 0 0 14 0 1664.8158 P22695 P22695 71 84 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 2;3 9.3603E-08 177.16 By MS/MS 7 0.707 1 2 1 4 22201000 22201000 0 16011 662 16955 40683;40684;40685;40686 28690;28691 28691 2 398660 0 YEDICPSTHNMDVPNIK AKVHLVGIDIFTGKKYEDICPSTHNMDVPN DICPSTHNMDVPNIKRNDFQLIGIQDGYLS K Y E I K R 0 0 2 2 1 0 1 0 1 2 0 1 1 0 2 1 1 0 1 1 0 0 17 0 2031.903 P63241;Q6IS14;Q9GZV4 P63241 69 85 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 3 0.042255 61.641 By MS/MS 10 0 2 2 3059400 3059400 0 16012 1177 16956;16957 40687;40688 28692;28693 28692 917 2 3251900 0 YEDQLKQQQLLNEENLR HQARAQYQDKLARQRYEDQLKQQQLLNEEN DQLKQQQLLNEENLRKQEESVQKQEAMRRA R Y E L R K 0 1 2 1 0 4 3 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 17 1 2160.0811 Q5T9A4;Q9NVI7 Q9NVI7 189 205 ATAD3B;ATAD3A ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3A no no 3 0.00021713 120.9 By MS/MS 5 0 1 1 3317800 3317800 0 16013 2655;1634 16958 40689 28694 28694 1 136380 0 YEEEEEQSR DELEEEARKADRESRYEEEEEQSRSMSRKR ADRESRYEEEEEQSRSMSRKRKASVHSSGR R Y E S R S 0 1 0 0 0 1 5 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 9 0 1197.4786 Q9Y5B9 Q9Y5B9 1006 1014 SUPT16H FACT complex subunit SPT16 yes yes 2 0.0023249 126.31 By MS/MS 1.5 0.5 1 1 2 191260 191260 0 16014 2968 16959 40690;40691 28695;28696 28695 2 9423.2 0 YEEIDNAPEER ITKILAEGGGAKFKKYEEIDNAPEERARGI KFKKYEEIDNAPEERARGITINAAHVEYST K Y E E R A 1 1 1 1 0 0 4 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 11 0 1363.5892 P49411 P49411 92 102 TUFM Elongation factor Tu, mitochondrial yes yes 2 7.5528E-07 182.28 By MS/MS By MS/MS 7.8 1.47 1 2 1 1 4 1 14293000 14170000 123490 16015 918 16960 40692;40693;40694;40695;40696 28697;28698;28699;28700;28701 28698 5 594250 506940 YEEIDNAPEERAR ITKILAEGGGAKFKKYEEIDNAPEERARGI KKYEEIDNAPEERARGITINAAHVEYSTAA K Y E A R G 2 2 1 1 0 0 4 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 13 1 1590.7274 P49411 P49411 92 104 TUFM Elongation factor Tu, mitochondrial yes yes 2;3 0.00033129 160.36 By MS/MS 7.33 0.471 2 1 3 9528800 9528800 0 16016 918 16961 40697;40698;40699 28702;28703 28703 2 174070 0 YEEIVKEVSTYIK VNKMDSTEPPYSQKRYEEIVKEVSTYIKKI KRYEEIVKEVSTYIKKIGYNPDTVAFVPIS R Y E I K K 0 0 0 0 0 0 3 0 0 2 0 2 0 0 0 1 1 0 2 2 0 0 13 1 1599.8396 Q5VTE0;P68104 Q5VTE0 167 179 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 0.0030773 136.38 By MS/MS 7 0.816 2 2 2 6 10352000 10352000 0 16017 1184 16962 40700;40701;40702;40703;40704;40705 28704;28705 28704 2 153340 0 YEELFPAFSDSR HFCIDMLNAKLAVQKYEELFPAFSDSRECK VQKYEELFPAFSDSRECKLMKKLLEAHEEQ K Y E S R E 1 1 0 1 0 0 2 0 0 0 1 0 0 2 1 2 0 0 1 0 0 0 12 0 1459.662 P54920 P54920 228 239 NAPA Alpha-soluble NSF attachment protein yes yes 2 0.0056197 103.08 By MS/MS 8 0 1 1 622710 622710 0 16018 1020 16963 40706 28706 28706 1 41080 0 YEELQITAGR AQKSKAEAESLYQSKYEELQITAGRHGDSV LYQSKYEELQITAGRHGDSVRNSKIEISEL K Y E G R H 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1178.5932 P04264;CON__P04264;P04259 P04264 377 386 KRT1;KRT6B Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B no no 2 5.2698E-07 188.91 By MS/MS By MS/MS 5.09 2.95 3 3 2 2 2 3 1 2 2 2 11 11 134890000 69093000 65795000 + 16019 450;45;449 16964 40707;40708;40709;40710;40711;40712;40713;40714;40715;40716;40717;40718;40719;40720;40721;40722;40723;40724;40725;40726;40727;40728 28707;28708;28709;28710;28711;28712;28713;28714;28715;28716;28717;28718;28719;28720;28721;28722;28723;28724;28725;28726;28727;28728;28729;28730;28731;28732;28733;28734;28735;28736;28737 28729 31 14558000 172790000 YEELQQTAGR ANRSRTEAESWYQTKYEELQQTAGRHGDDL WYQTKYEELQQTAGRHGDDLRNTKHEISEM K Y E G R H 1 1 0 0 0 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1193.5677 CON__Q5XQN5;CON__P13647;P13647 CON__P13647 365 374 KRT5 Keratin, type II cytoskeletal 5 no no 2 1.6547E-10 201.61 By MS/MS By MS/MS 3.9 2.39 1 2 2 2 2 1 5 5 5828300 2462400 3365900 + 16020 50;61 16965 40729;40730;40731;40732;40733;40734;40735;40736;40737;40738 28738;28739;28740;28741;28742;28743;28744;28745 28738 8 316840 4203900 YEELQVTAGR AQRSRAEAESWYQTKYEELQVTAGRHGDDL WYQTKYEELQVTAGRHGDDLRNTKQEIAEI K Y E G R H 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 1164.5775 CON__P02538;P02538;CON__O95678;O95678;CON__P48668;P48668 CON__P02538 360 369 KRT6A;KRT75;KRT6C Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6C no no 2 0.0010208 121.9 By matching By MS/MS 4.43 1.84 1 1 1 2 1 1 1 6 2487300 1371300 1116000 + 16021 36;53 16966 40739;40740;40741;40742;40743;40744;40745 28746;28747;28748;28749 28749 4 56365 2799700 YEELQVTVGR AQRSKEEAEALYHSKYEELQVTVGRHGDSL LYHSKYEELQVTVGRHGDSLKEIKIEISEL K Y E G R H 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 2 0 0 10 0 1192.6088 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 375 384 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 1.3453E-06 191.4 By MS/MS By MS/MS 5.35 3.01 2 2 2 1 2 2 1 1 2 2 7 10 16944000 10000000 6943300 + 16022 52 16967 40746;40747;40748;40749;40750;40751;40752;40753;40754;40755;40756;40757;40758;40759;40760;40761;40762 28750;28751;28752;28753;28754;28755;28756;28757;28758;28759;28760;28761;28762;28763;28764;28765 28764 16 2392800 20965000 YEFGESDLR IQERLRYAPLGWSKKYEFGESDLRSACDTV LGWSKKYEFGESDLRSACDTVDTWLDDTAK K Y E L R S 0 1 0 1 0 0 2 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 9 0 1114.4931 Q14204 Q14204 4205 4213 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.011256 102.07 By MS/MS 1.5 0.5 1 1 2 356040 356040 0 16023 1421 16968 40763;40764 28766 28766 1 17471 0 YEGFFGLYR LMYKNSFDCFKKVLRYEGFFGLYRGLLPQL FKKVLRYEGFFGLYRGLLPQLLGVAPEKAI R Y E Y R G 0 1 0 0 0 0 1 2 0 0 1 0 0 2 0 0 0 0 2 0 0 0 9 0 1150.5447 Q9UJS0;O75746 Q9UJS0 384 392 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 2 0.0006469 150.05 By MS/MS 5.4 2.42 1 1 1 1 1 5 9727600 9727600 0 16024 2798;327 16969 40765;40766;40767;40768;40769 28767;28768;28769;28770;28771 28769 5 340210 0 YEGFFSLWK PEYKNGLDVLFKVVRYEGFFSLWKGFTPYY LFKVVRYEGFFSLWKGFTPYYARLGPHTVL R Y E W K G 0 0 0 0 0 0 1 1 0 0 1 1 0 2 0 1 0 1 1 0 0 0 9 0 1175.5651 Q02978 Q02978 272 280 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 2 0.014571 99.802 By MS/MS 8 0 1 1 276300 276300 0 16025 1260 16970 40770 28772 28772 1 18227 0 YEGGYPALTEVMNK NTWYGEQDQAVHLWRYEGGYPALTEVMNKL RYEGGYPALTEVMNKLRENKEFLEFRKARS R Y E N K L 1 0 1 0 0 0 2 2 0 0 1 1 1 0 1 0 1 0 2 1 0 0 14 0 1570.7337 O75323 O75323 130 143 GBAS Protein NipSnap homolog 2 yes yes 2 2.9454E-12 202.65 By MS/MS 8 0 2 2 6530000 6530000 0 16026 296 16971;16972 40771;40772 28773;28774;28775;28776 28773 165 4 430780 0 YEILTPNSIPK QGFPNRVVFQEFRQRYEILTPNSIPKGFMD FRQRYEILTPNSIPKGFMDGKQACVLMIKA R Y E P K G 0 0 1 0 0 0 1 0 0 2 1 1 0 0 2 1 1 0 1 0 0 0 11 0 1273.6918 P35579 P35579 721 731 MYH9 Myosin-9 yes yes 2 0.0085301 99.688 By MS/MS 1.5 0.5 1 1 2 502150 502150 0 16027 793 16973 40773;40774 28777 28777 1 24936 0 YEIMDGAPVKGESIPIR GIGPSTTTETETIAKYEIMDGAPVKGESIP IMDGAPVKGESIPIRLFLAGYDPTPTMRDV K Y E I R L 1 1 0 1 0 0 2 2 0 3 0 1 1 0 2 1 0 0 1 1 0 0 17 1 1873.9608 O75436 O75436 233 249 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 3 0.046173 56.872 By MS/MS 7 0 1 1 1464900 1464900 0 16028 309 16974 40775 28778 28778 1 26178 0 YEKEKFEEMIQQIK KLDVTSVEDYKALQKYEKEKFEEMIQQIKE KYEKEKFEEMIQQIKETGANLAICQWGFDD K Y E I K E 0 0 0 0 0 2 4 0 0 2 0 3 1 1 0 0 0 0 1 0 0 0 14 2 1841.9233 P48643 P48643 280 293 CCT5 T-complex protein 1 subunit epsilon yes yes 2;3 0.00014345 162.31 By MS/MS 6 0 2 2 21951000 21951000 0 16029 909 16975 40776;40777 28779;28780 28780 2 171180 0 YELGRPAANTK RKTGGKRKPYHKKRKYELGRPAANTKIGPR KKRKYELGRPAANTKIGPRRIHTVRVRGGN K Y E T K I 2 1 1 0 0 0 1 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 11 1 1218.6357 P62241 P62241 27 37 RPS8 40S ribosomal protein S8 yes yes 2 0.010305 140.78 By MS/MS 8.5 0.5 1 1 2 1945900 1945900 0 16030 1118 16976 40778;40779 28781 28781 1 218770 0 YELQLANPK WNYNFMGVRHDPNMKYELQLANPKEFYHEV HDPNMKYELQLANPKEFYHEVHRPSHFLNF K Y E P K E 1 0 1 0 0 1 1 0 0 0 2 1 0 0 1 0 0 0 1 0 0 0 9 0 1074.571 Q6P2Q9 Q6P2Q9 2294 2302 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.01057 103.56 By MS/MS 2 0 1 1 387040 387040 0 16031 1706 16977 40780 28782 28782 1 19238 0 YELQQLEGSSDR SEILSKKQNELKNVKYELQQLEGSSDRILE NVKYELQQLEGSSDRILELDQELIKAEREL K Y E D R I 0 1 0 1 0 2 2 1 0 0 2 0 0 0 0 2 0 0 1 0 0 0 12 0 1423.6579 Q92878 Q92878 462 473 RAD50 DNA repair protein RAD50 yes yes 2 0.00030816 147.58 By MS/MS 3 0 1 1 750310 750310 0 16032 2083 16978 40781 28783 28783 1 19587 0 YENEVALR QIDNARLAADDFRLKYENEVALRQSVEADI ADDFRLKYENEVALRQSVEADINGLRRVLD K Y E L R Q 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 992.49271 CON__P13645;P13645 CON__P13645 238 245 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.003788 144.09 By MS/MS By MS/MS 5.43 2.9 1 2 1 2 2 1 1 1 1 2 4 10 8458100 2859700 5598400 + 16033 49 16979 40782;40783;40784;40785;40786;40787;40788;40789;40790;40791;40792;40793;40794;40795 28784;28785;28786;28787;28788;28789;28790;28791;28792;28793;28794;28795 28788 12 279660 20661000 YENGAFQER QLADAAKRGAFGHERYENGAFQERALRCFH AFGHERYENGAFQERALRCFHQLMKDTTLN R Y E E R A 1 1 1 0 0 1 2 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 9 0 1112.4887 P23919 P23919 151 159 DTYMK Thymidylate kinase yes yes 2 0.0012899 137.46 By MS/MS 9 0 1 1 530020 530020 0 16034 675 16980 40796 28796 28796 1 304180 0 YENYELTLK SDLQSGIIKNTASLKYENYELTLKSDTNGK NTASLKYENYELTLKSDTNGKYKNFATSNK K Y E L K S 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 2 0 0 0 9 0 1171.5761 P04114 P04114 1563 1571 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 0.005553 114.51 By MS/MS 4 0.816 1 1 1 3 2200500 2200500 0 16035 445 16981 40797;40798;40799 28797;28798 28797 2 71169 0 YEPAAVSEQGDK ______________________________ RDKYEPAAVSEQGDKKGKKGKKDRDMDELK K Y E D K K 2 0 0 1 0 1 2 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 12 0 1292.5885 P05023 P05023 10 21 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.044496 76.165 By MS/MS 2.5 1.12 1 1 1 1 4 945780 945780 0 16036 463 16982 40800;40801;40802;40803 28799 28799 1 34132 0 YEQGFITDPVVLSPK CTPEFQANEVRKVKKYEQGFITDPVVLSPK YEQGFITDPVVLSPKDRVRDVFEAKARHGF K Y E P K D 0 0 0 1 0 1 1 1 0 1 1 1 0 1 2 1 1 0 1 2 0 0 15 0 1691.877 P12268 P12268 110 124 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 2 4.7725E-07 161.21 By MS/MS 6.5 0.5 1 1 2 3208000 3208000 0 16037 564 16983 40804;40805 28800 28800 1 26933 0 YESHPVCADLQAK QYQKAAEEVEAKFKRYESHPVCADLQAKIL KRYESHPVCADLQAKILQCYRENTHQTLKC R Y E A K I 2 0 0 1 1 1 1 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 13 0 1516.698 Q9NX63 Q9NX63 177 189 CHCHD3 MICOS complex subunit MIC19 yes yes 3 0.047372 73.927 By MS/MS 8 0 1 1 782550 782550 0 16038 2682 16984 40806 28801 28801 1 51625 0 YESLELCRPVLQQGR LQYFGILLDQGQLNKYESLELCRPVLQQGR YESLELCRPVLQQGRKQLLEKWLKEDKLEC K Y E G R K 0 2 0 0 1 2 2 1 0 0 3 0 0 0 1 1 0 0 1 1 0 0 15 1 1846.936 Q00610 Q00610 430 444 CLTC Clathrin heavy chain 1 yes yes 3 0.027602 63.292 By MS/MS 3.5 0.5 1 1 2 971510 971510 0 16039 1235 16985 40807;40808 28802 28802 1 25605 0 YESLTDPSK RELISNASDALDKIRYESLTDPSKLDSGKE ALDKIRYESLTDPSKLDSGKELKIDIIPNP R Y E S K L 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 2 1 0 1 0 0 0 9 0 1038.487 P07900;P08238;Q58FF7;Q58FF8;Q58FF6 P08238 56 64 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta 4 no no 2 0.00058512 151.44 By MS/MS 5.38 2.83 1 1 1 1 1 1 1 1 8 12636000 12636000 0 16040 501;494 16986 40809;40810;40811;40812;40813;40814;40815;40816 28803;28804;28805;28806;28807 28805 5 397240 0 YESLTDPSKLDSGK RELISNASDALDKIRYESLTDPSKLDSGKE RYESLTDPSKLDSGKELKIDIIPNPQERTL R Y E G K E 0 0 0 2 0 0 1 1 0 0 2 2 0 0 1 3 1 0 1 0 0 0 14 1 1538.7464 P07900;P08238;Q58FF7;Q58FF8 P08238 56 69 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 2 3.6455E-11 200.93 By MS/MS 4.5 0.5 1 1 2 3867100 3867100 0 16041 501;494 16987 40817;40818 28808;28809 28809 2 126070 0 YESLTDPSKLDSGKELK RELISNASDALDKIRYESLTDPSKLDSGKE SLTDPSKLDSGKELKIDIIPNPQERTLTLV R Y E L K I 0 0 0 2 0 0 2 1 0 0 3 3 0 0 1 3 1 0 1 0 0 0 17 2 1908.968 P08238;Q58FF7;Q58FF8 P08238 56 72 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 yes no 3 0.0048516 99.055 By MS/MS 4.5 0.5 1 1 2 5584600 5584600 0 16042 501 16988 40819;40820 28810;28811 28811 2 187620 0 YESSALPSGQLTSLSEYASR ATEQEVKEDIAKLLRYESSALPSGQLTSLS LPSGQLTSLSEYASRMRAGTRNIYYLCAPN R Y E S R M 2 1 0 0 0 1 2 1 0 0 3 0 0 0 1 6 1 0 2 0 0 0 20 0 2145.0226 Q12931 Q12931 470 489 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2 7.1115E-13 173.19 By MS/MS 5.5 0.5 1 1 2 3607700 3607700 0 16043 1316 16989 40821;40822 28812 28812 1 88741 0 YESSTASALVA ARYYKTKRVLPPNWKYESSTASALVA____ PNWKYESSTASALVA_______________ K Y E V A - 3 0 0 0 0 0 1 0 0 0 1 0 0 0 0 3 1 0 1 1 0 0 11 0 1097.5241 P62277 P62277 141 151 RPS13 40S ribosomal protein S13 yes yes 2 0.042267 78.77 By MS/MS 9.5 0.5 1 1 2 1203800 1203800 0 16044 1126 16990 40823;40824 28813 28813 1 1043600 0 YETFISDVLQR PKRRAVEATGEKVLRYETFISDVLQRDLRK KVLRYETFISDVLQRDLRKVLDHRDKVYEQ R Y E Q R D 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 11 0 1369.6878 Q9UBK9 Q9UBK9 20 30 UXT Protein UXT yes yes 2 0.0063512 102.06 By MS/MS 9.5 0.5 1 1 2 310230 310230 0 16045 2752 16991 40825;40826 28814 28814 1 286170 0 YEVAVPLCK RTLHNLVIQYASQGRYEVAVPLCKQALEDL YASQGRYEVAVPLCKQALEDLEKTSGHDHP R Y E C K Q 1 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 1 2 0 0 9 0 1077.5529 Q9H0B6;Q07866;Q9NSK0 Q9H0B6 214 222 KLC2;KLC1;KLC4 Kinesin light chain 2;Kinesin light chain 1;Kinesin light chain 4 no no 2 0.040344 92.439 By MS/MS 5 0 1 1 0 0 0 16046 2451;1284;2626 16992 40827 28815 28815 1 0 0 YEVTSGGGGTSR TLGRMIRAESGPDLRYEVTSGGGGTSRMYY DLRYEVTSGGGGTSRMYYSRRGVITDQNSD R Y E S R M 0 1 0 0 0 0 1 4 0 0 0 0 0 0 0 2 2 0 1 1 0 0 12 0 1169.5313 P15924 P15924 28 39 DSP Desmoplakin yes yes 2 0.00020038 152.64 By MS/MS By MS/MS 5.18 2.92 1 2 1 1 1 1 1 1 1 1 2 9 1420800 1046000 374820 16047 603 16993 40828;40829;40830;40831;40832;40833;40834;40835;40836;40837;40838 28816;28817;28818;28819;28820;28821 28821 6 84142 1217100 YEWDVAEAR ARQELKQRARYLAEKYEWDVAEARKIWCFG RYLAEKYEWDVAEARKIWCFGPDGTGPNIL K Y E A R K 2 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 9 0 1137.5091 P13639 P13639 639 647 EEF2 Elongation factor 2 yes yes 2 0.00086423 145.17 By MS/MS 4.5 0.5 1 1 2 3259700 3259700 0 16048 576 16994 40839;40840 28822 28822 1 92348 0 YEYGIFNQK SMATLGLAAYGYGIRYEYGIFNQKIRDGWQ YGYGIRYEYGIFNQKIRDGWQVEEADDWLR R Y E Q K I 0 0 1 0 0 1 1 1 0 1 0 1 0 1 0 0 0 0 2 0 0 0 9 0 1160.5502 P06737 P06737 162 170 PYGL Glycogen phosphorylase, liver form yes yes 2 0.0067288 111.95 By MS/MS 4.5 0.5 1 1 2 942250 942250 0 16049 483 16995 40841;40842 28823 28823 1 26538 0 YEYVLHPR KSRSNAFAEKNGLQKYEYVLHPRTTGFTFV EKNGLQKYEYVLHPRTTGFTFVVDRLREGK K Y E P R T 0 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 2 1 0 0 8 0 1075.5451 Q6UWP7 Q6UWP7 227 234 LCLAT1 Lysocardiolipin acyltransferase 1 yes yes 3 0.03784 89.142 By MS/MS 1 0 1 1 184610 184610 0 16050 1729 16996 40843 28824 28824 1 9019.8 0 YFATVGGSASETNIEEK ESGAGKTVSAKYAMRYFATVGGSASETNIE ATVGGSASETNIEEKVLASSPIMEAIGNAK R Y F E K V 2 0 1 0 0 0 3 2 0 1 0 1 0 1 0 2 2 0 1 1 0 0 17 0 1801.837 Q9ULV0 Q9ULV0 179 195 MYO5B Unconventional myosin-Vb yes yes 2 1.3048E-06 143.55 By MS/MS 2 0 1 1 131850 131850 0 16051 2827 16997 40844 28825 28825 1 6553.4 0 YFDLGLPNR IKEKLILPHVDIQLKYFDLGLPNRDQTDDQ VDIQLKYFDLGLPNRDQTDDQVTIDSALAT K Y F N R D 0 1 1 1 0 0 0 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 9 0 1093.5556 P48735 P48735 81 89 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 2 0.010344 104.06 By MS/MS 7 0 1 1 1304500 1304500 0 16052 912 16998 40845 28826 28826 1 23312 0 YFDTAVSR GLALTETWACSHSMRYFDTAVSRPGRGEPR ACSHSMRYFDTAVSRPGRGEPRFISVGYVD R Y F S R P 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 1 0 0 8 0 957.4556 P10321 P10321 31 38 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 0.0085868 123.72 By MS/MS 7 0 1 1 2349500 2349500 0 16053 536 16999 40846 28827 28827 1 41987 0 YFDTAVSRPGR GLALTETWACSHSMRYFDTAVSRPGRGEPR HSMRYFDTAVSRPGRGEPRFISVGYVDDTQ R Y F G R G 1 2 0 1 0 0 0 1 0 0 0 0 0 1 1 1 1 0 1 1 0 0 11 1 1267.6309 P10321 P10321 31 41 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain yes yes 2 0.0023271 150.27 By MS/MS 7 0 1 1 2041700 2041700 0 16054 536 17000 40847 28828 28828 1 36486 0 YFDWILISR LHGFITMHSCSINGKYFDWILISRRSCFRA CSINGKYFDWILISRRSCFRAGVRYYVRGI K Y F S R R 0 1 0 1 0 0 0 0 0 2 1 0 0 1 0 1 0 1 1 0 0 0 9 0 1211.6339 Q9NTJ5 Q9NTJ5 205 213 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 2 0.037588 86.794 By MS/MS 4 0 1 1 357990 357990 0 16055 2631 17001 40848 28829 28829 1 9772.8 0 YFEGVSPK YKLLSITVRNAKKIKYFEGVSPKSLKHSPE RNAKKIKYFEGVSPKSLKHSPEDPEKYSCF K Y F P K S 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 0 0 8 0 925.45453 P78527 P78527 682 689 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.031446 98.629 By MS/MS 3 1.41 1 1 1 1 1 5 6407400 6407400 0 16056 1197 17002 40849;40850;40851;40852;40853 28830;28831;28832 28831 3 283060 0 YFGDCKEEELLPK IYLASSPEVEGVSGRYFGDCKEEELLPKAM GRYFGDCKEEELLPKAMDESVARKLWDISE R Y F P K A 0 0 0 1 1 0 3 1 0 0 2 2 0 1 1 0 0 0 1 0 0 0 13 1 1626.76 Q9HBH5 Q9HBH5 302 314 RDH14 Retinol dehydrogenase 14 yes yes 2 0.021644 106.67 By MS/MS 8 0 1 1 1437500 1437500 0 16057 2552 17003 40854 28833 28833 1 94829 0 YFGGCPVIK LVLMSATGDNERFSRYFGGCPVIKVPGFMY NERFSRYFGGCPVIKVPGFMYPVKEHYLED R Y F I K V 0 0 0 0 1 0 0 2 0 1 0 1 0 1 1 0 0 0 1 1 0 0 9 0 1039.5161 Q7L2E3 Q7L2E3 602 610 DHX30 Putative ATP-dependent RNA helicase DHX30 yes yes 2 0.040126 85.359 By MS/MS 3 0 1 1 1344400 1344400 0 16058 1763 17004 40855 28834 28834 1 35095 0 YFNSYTLTGR GPESDAQYQFTGIKKYFNSYTLTGRMNCVL TGIKKYFNSYTLTGRMNCVLATYGSIALIV K Y F G R M 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 2 0 2 0 0 0 10 0 1220.5826 Q96IX5 Q96IX5 18 27 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 2 0.0004709 146.11 By MS/MS By matching 10 0 2 1 1 2116900 2069300 47655 16059 2203 17005 40856;40857 28835 28835 1 2199400 1222300 YFPTQALNFAFK GVLSFWRGNLANVIRYFPTQALNFAFKDKY VIRYFPTQALNFAFKDKYKQIFLGGVDKRT R Y F F K D 2 0 1 0 0 1 0 0 0 0 1 1 0 3 1 0 1 0 1 0 0 0 12 0 1445.7343 P05141;Q9H0C2;P12235;P12236 P05141 81 92 SLC25A5;SLC25A31;SLC25A4;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2 1.2428E-05 199.33 By MS/MS 5.56 3.02 1 1 1 1 1 1 1 1 1 9 8047200 8047200 0 16060 469;563;562 17006 40858;40859;40860;40861;40862;40863;40864;40865;40866 28836;28837;28838;28839;28840;28841;28842;28843 28840 8 434260 0 YFQINQDEEEEEDED WLRVVANSKESYELRYFQINQDEEEEEDED YFQINQDEEEEEDED_______________ R Y F E D - 0 0 1 3 0 2 6 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 15 0 1930.7228 P35268 P35268 114 128 RPL22 60S ribosomal protein L22 yes yes 2 0.0012593 117.98 By MS/MS 10 0 1 1 194530 194530 0 16061 788 17007 40867 28844 28844 1 206760 0 YFSEADKIK GSLDAMDKHLSSQNRYFSEADKIKVAQGVS LSSQNRYFSEADKIKVAQGVSGAVQDKGSI R Y F I K V 1 0 0 1 0 0 1 0 0 1 0 2 0 1 0 1 0 0 1 0 0 0 9 1 1099.555 P12268 P12268 430 438 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes yes 3 0.0041019 112.11 By MS/MS By matching 7.67 1.49 2 1 1 1 1 5 1 9009200 8965200 43956 16062 564 17008 40868;40869;40870;40871;40872;40873 28845 28845 1 184990 134810 YFSGPAITLENTR SFSVFAEDDVKVVEKYFSGPAITLENTRVV EKYFSGPAITLENTRVVSQSLQHYLELGRQ K Y F T R V 1 1 1 0 0 0 1 1 0 1 1 0 0 1 1 1 2 0 1 0 0 0 13 0 1467.7358 O95155 O95155 611 623 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 0.00029478 143.5 By MS/MS 3 0 1 1 393460 393460 0 16063 367 17009 40874 28846 28846 1 10271 0 YFSLPFCVGSK MNTVGPYHNRQETYKYFSLPFCVGSKKSIS ETYKYFSLPFCVGSKKSISHYHETLGEALQ K Y F S K K 0 0 0 0 1 0 0 1 0 0 1 1 0 2 1 2 0 0 1 1 0 0 11 0 1303.6271 Q9HD45 Q9HD45 60 70 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 2 0.014388 94.409 By MS/MS 3 2.16 1 1 1 3 834380 834380 0 16064 2568 17010 40875;40876;40877 28847;28848 28848 2 10811 0 YFTWDPSR CDVIWLDIEHADGKRYFTWDPSRFPQPRTM EHADGKRYFTWDPSRFPQPRTMLERLASKR R Y F S R F 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 8 0 1070.4821 Q14697 Q14697 438 445 GANAB Neutral alpha-glucosidase AB yes yes 2 0.019122 107.9 By MS/MS 4.5 0.5 1 1 2 649010 649010 0 16065 1443 17011 40878;40879 28849 28849 1 19196 0 YFVEAGAMAVR NVILTTGGIDDMCLKYFVEAGAMAVRRVLK MCLKYFVEAGAMAVRRVLKRDLKRIAKASG K Y F V R R 3 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 2 0 0 11 0 1212.5961 P17987 P17987 299 309 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.0003634 141.48 By MS/MS 3.8 2.32 1 1 1 1 1 5 13399000 13399000 0 16066 619 17012 40880;40881;40882;40883;40884 28850;28851 28851 411 2 142350 0 YGALALQEIFDGIQPK FIKSFLVFINLYCIKYGALALQEIFDGIQP GALALQEIFDGIQPKMFGMVLEKIIIPEIQ K Y G P K M 2 0 0 1 0 2 1 2 0 2 2 1 0 1 1 0 0 0 1 0 0 0 16 0 1761.9301 P55060 P55060 801 816 CSE1L Exportin-2 yes yes 2 1.7626E-12 180.24 By MS/MS 5 1 1 1 2 122450 122450 0 16067 1025 17013 40885;40886 28852;28853 28853 2 3342.7 0 YGALVICETSEQK GAMQSPSLHKLVLGKYGALVICETSEQKTN GKYGALVICETSEQKTNLEDVGRRLGQHVV K Y G Q K T 1 0 0 0 1 1 2 1 0 1 1 1 0 0 0 1 1 0 1 1 0 0 13 0 1496.7181 P43897 P43897 234 246 TSFM Elongation factor Ts, mitochondrial yes yes 2 2.1601E-07 206.49 By MS/MS By matching 8.75 0.829 2 1 1 3 1 25512000 25456000 56568 16068 868 17014 40887;40888;40889;40890 28854 28854 1 1863000 482600 YGDFRADDADEFGYSR NAQESAKSARLNLWRYGDFRADDADEFGYS GDFRADDADEFGYSR_______________ R Y G S R - 2 2 0 4 0 0 1 2 0 0 0 0 0 2 0 1 0 0 2 0 0 0 16 1 1882.7758 Q7KZF4 Q7KZF4 895 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 3 0.00022837 122.12 By MS/MS 4 0 1 1 1118700 1118700 0 16069 1757 17015 40891 28855 28855 1 30538 0 YGDINFDDLNSEQSYNK SAPSRIVVVSSKLYKYGDINFDDLNSEQSY DINFDDLNSEQSYNKSFCYSRSKLANILFT K Y G N K S 0 0 3 3 0 1 1 1 0 1 1 1 0 1 0 2 0 0 2 0 0 0 17 0 2020.865 Q9HBH5 Q9HBH5 197 213 RDH14 Retinol dehydrogenase 14 yes yes 2 4.7547E-69 304.03 By MS/MS 8 0 1 1 982150 982150 0 16070 2552 17016 40892 28856 28856 1 64792 0 YGDLLPADGILIQGNDLK IPVADITVGDIAQVKYGDLLPADGILIQGN LLPADGILIQGNDLKIDESSLTGESDHVKK K Y G L K I 1 0 1 3 0 1 0 3 0 2 4 1 0 0 1 0 0 0 1 0 0 0 18 0 1914.0098 P20020;P23634 P20020 220 237 ATP2B1;ATP2B4 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 4 yes no 2 0.00031669 120.29 By MS/MS 3 0 1 1 221520 221520 0 16071 637 17017 40893 28857 28857 1 5782.7 0 YGEDSEQFR LYSLELAGLDEIGKRYGEDSEQFRDASKIL DEIGKRYGEDSEQFRDASKILVDALQKFAD R Y G F R D 0 1 0 1 0 1 2 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1129.4676 O75787 O75787 226 234 ATP6AP2 Renin receptor yes yes 2 0.0072852 138.06 By MS/MS 8 0 1 1 0 0 0 16072 328 17018 40894 28858 28858 1 0 0 YGEGDSLTLQQLK PAISAASFLQDLIHRYGEGDSLTLQQLKAL HRYGEGDSLTLQQLKALLNHLDVGVGRGNV R Y G L K A 0 0 0 1 0 2 1 2 0 0 3 1 0 0 0 1 1 0 1 0 0 0 13 0 1450.7304 Q15043 Q15043 51 63 SLC39A14 Zinc transporter ZIP14 yes yes 2 9.2242E-26 247.96 By MS/MS 2.5 1.12 1 1 1 1 4 1155500 1155500 0 16073 1470 17019 40895;40896;40897;40898 28859 28859 1 44565 0 YGEICGFSDTNLQK RPSAIGRIPSKYVGRYGEICGFSDTNLQKL RYGEICGFSDTNLQKLYFQLRLNQPYCGYA R Y G Q K L 0 0 1 1 1 1 1 2 0 1 1 1 0 1 0 1 1 0 1 0 0 0 14 0 1630.7297 Q86UT6 Q86UT6 306 319 NLRX1 NLR family member X1 yes yes 2 4.203E-05 155.47 By MS/MS 4 0 1 1 3041100 3041100 0 16074 1825 17020 40899 28860 28860 1 83019 0 YGEIPAELR ERAIYFDGDFGQIVRYGEIPAELRAAATDH FGQIVRYGEIPAELRAAATDHRQELIECVA R Y G L R A 1 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 1046.5397 Q96RP9 Q96RP9 235 243 GFM1 Elongation factor G, mitochondrial yes yes 2 0.042535 83.998 By MS/MS By matching 5 0 2 1 1 25283000 25198000 85788 16075 2247 17021 40900;40901 28861 28861 1 1035700 253850 YGELEPYVYFNK VSYLEPKLQDTIKAKYGELEPYVYFNKGL_ KAKYGELEPYVYFNKGL_____________ K Y G N K G 0 0 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 3 1 0 0 12 0 1520.7187 Q96NB2 Q96NB2 309 320 SFXN2 Sideroflexin-2 yes yes 2 4.6954E-07 215.06 By MS/MS 8 0 1 1 10701000 10701000 0 16076 2231 17022 40902 28862 28862 1 705930 0 YGEPGEVFINK PADITEDEFKRLFAKYGEPGEVFINKGKGF LFAKYGEPGEVFINKGKGFGFIKLESRALA K Y G N K G 0 0 1 0 0 0 2 2 0 1 0 1 0 1 1 0 0 0 1 1 0 0 11 0 1251.6136 P23246 P23246 320 330 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.016014 94.409 By MS/MS 4 0 1 1 2495800 2495800 0 16077 665 17023 40903 28863 28863 1 68133 0 YGEPSEVFINR PTDITEEDFKRLFERYGEPSEVFINRDRGF LFERYGEPSEVFINRDRGFGFIRLESRTLA R Y G N R D 0 1 1 0 0 0 2 1 0 1 0 0 0 1 1 1 0 0 1 1 0 0 11 0 1309.6303 Q8WXF1 Q8WXF1 105 115 PSPC1 Paraspeckle component 1 yes yes 2 0.0049868 107.79 By MS/MS 5 0 1 1 707820 707820 0 16078 2046 17024 40904 28864 28864 1 29094 0 YGEQGLR YEVLSNPEKRELYDRYGEQGLREGSGGGGG EKRELYDRYGEQGLREGSGGGGGMDDIFSH R Y G L R E 0 1 0 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 821.40317 O60884 O60884 69 75 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 2 0.039937 108.09 By MS/MS 7.5 1.71 1 1 1 1 1 1 6 8932100 8932100 0 16079 273 17025 40905;40906;40907;40908;40909;40910 28865 28865 1 326560 0 YGFEPTQEGK KDFKDGTFDPDNLEKYGFEPTQEGKLFQLY DNLEKYGFEPTQEGKLFQLYPRNFLR____ K Y G G K L 0 0 0 0 0 1 2 2 0 0 0 1 0 1 1 0 1 0 1 0 0 0 10 0 1154.5244 Q8IXM3 Q8IXM3 117 126 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 2 0.000694 137.05 By MS/MS 10 0 1 1 2575500 2575500 0 16080 1873 17026 40911 28866 28866 1 2737500 0 YGGDEIPFSPYR AYVPDVTGRYTILIKYGGDEIPFSPYRVRA LIKYGGDEIPFSPYRVRAVPTGDASKCTVT K Y G Y R V 0 1 0 1 0 0 1 2 0 1 0 0 0 1 2 1 0 0 2 0 0 0 12 0 1399.6408 P21333 P21333 1622 1633 FLNA Filamin-A yes yes 2 0.0025652 118.23 By MS/MS 2 0.816 1 1 1 3 1774200 1774200 0 16081 648 17027 40912;40913;40914 28867;28868 28867 2 69939 0 YGGDPQNPHK IPEKVFQASPEDHEKYGGDPQNPHKLHIVT EDHEKYGGDPQNPHKLHIVTRIKSTRRRPY K Y G H K L 0 0 1 1 0 1 0 2 1 0 0 1 0 0 2 0 0 0 1 0 0 0 10 0 1111.5047 Q8TCC3 Q8TCC3 56 65 MRPL30 39S ribosomal protein L30, mitochondrial yes yes 2 0.053709 78.113 By MS/MS 10 0 1 1 57870 57870 0 16082 1993 17028 40915 28869 28869 1 61509 0 YGGISTASVDFEQPTR EKYGIPEPPEPKRRKYGGISTASVDFEQPT GGISTASVDFEQPTRDGLGSDNIGSRMLQA K Y G T R D 1 1 0 1 0 1 1 2 0 1 0 0 0 1 1 2 2 0 1 1 0 0 16 0 1726.8162 P98175 P98175 838 853 RBM10 RNA-binding protein 10 yes yes 2 0.0045171 106.79 By matching By MS/MS 3.67 0.471 1 2 1 2 215240 132690 82547 16083 1225 17029 40916;40917;40918 28870;28871 28871 2 3622.4 153730 YGGITDPGTVPR GAPETTALHGGFQRRYGGITDPGTVPRVPS QRRYGGITDPGTVPRVPSHFSRLPLGGWAE R Y G P R V 0 1 0 1 0 0 0 3 0 1 0 0 0 0 2 0 2 0 1 1 0 0 12 0 1231.6197 Q7Z3C6 Q7Z3C6 785 796 ATG9A Autophagy-related protein 9A yes yes 2 0.012847 117.31 By MS/MS 1 0 1 1 174680 174680 0 16084 1782 17030 40919 28872 28872 1 8534.7 0 YGGQPVPNFPSK TYIPLCPGAYTVTIKYGGQPVPNFPSKLQV TIKYGGQPVPNFPSKLQVEPAVDTSGVQCY K Y G S K L 0 0 1 0 0 1 0 2 0 0 0 1 0 1 3 1 0 0 1 1 0 0 12 0 1289.6404 P21333 P21333 1235 1246 FLNA Filamin-A yes yes 2 0.0041482 110.38 By MS/MS 2 0 1 1 758860 758860 0 16085 648 17031 40920 28873 28873 1 37719 0 YGGVDGGCFDR INFTSRLNRRASFPKYGGVDGGCFDRHLIF SFPKYGGVDGGCFDRHLIFSRFRPISVFRE K Y G D R H 0 1 0 2 1 0 0 4 0 0 0 0 0 1 0 0 0 0 1 1 0 0 11 0 1201.4822 Q9Y4B6 Q9Y4B6 1063 1073 VPRBP Protein VPRBP yes yes 2 0.015829 93.111 By MS/MS 3 0 1 1 543940 543940 0 16086 2950 17032 40921 28874 28874 1 14200 0 YGKDATNVGDEGGFAPNILENKEGLELLK GAEVYHNLKNVIKEKYGKDATNVGDEGGFA APNILENKEGLELLKTAIGKAGYTDKVVIG K Y G L K T 2 0 3 2 0 0 4 5 0 1 4 3 0 1 1 0 1 0 1 1 0 0 29 2 3090.551 P06733 P06733 200 228 ENO1 Alpha-enolase yes yes 3 7.9633E-08 98.133 By MS/MS 6 0 1 1 1504300 1504300 0 16087 482 17033 40922 28875 28875 1 11730 0 YGLAAAVFTR FKKIEEVVERANNTRYGLAAAVFTRDLDKA ANNTRYGLAAAVFTRDLDKAMYFTQALQAG R Y G T R D 3 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 1 1 0 0 10 0 1067.5764 P30837 P30837 442 451 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 2 6.9199E-05 169.12 By MS/MS 6 0.816 1 1 1 3 6629300 6629300 0 16088 747 17034 40923;40924;40925 28876 28876 1 102740 0 YGLECLFR EFKQLALEDAKEGYRYGLECLFRYYSYGLE DAKEGYRYGLECLFRYYSYGLEKKFRLDIF R Y G F R Y 0 1 0 0 1 0 1 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 8 0 1056.5063 Q6PKG0;Q659C4 Q6PKG0 949 956 LARP1;LARP1B La-related protein 1;La-related protein 1B yes no 2 0.008595 123.69 By MS/MS 3.5 0.5 1 1 2 404920 404920 0 16089 1719 17035 40926;40927 28877 28877 1 10685 0 YGLFPANYVELR EMIDDGWWRGVCKGRYGLFPANYVELRQ__ KGRYGLFPANYVELRQ______________ R Y G L R Q 1 1 1 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 2 1 0 0 12 0 1440.7402 Q14247 Q14247 538 549 CTTN Src substrate cortactin yes yes 2 0.046661 75.509 By MS/MS 5 0 1 1 140130 140130 0 16090 1424 17036 40928 28878 28878 1 5759.9 0 YGLIGLNGIGK ELLSDTKLELNSGRRYGLIGLNGIGKSMLL SGRRYGLIGLNGIGKSMLLSAIGKREVPIP R Y G G K S 0 0 1 0 0 0 0 4 0 2 2 1 0 0 0 0 0 0 1 0 0 0 11 0 1103.6339 Q9UG63 Q9UG63 114 124 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.0059291 103.83 By MS/MS 4.5 0.5 1 1 2 555390 555390 0 16091 2771 17037 40929;40930 28879 28879 1 21746 0 YGLKPPTL SLCDAAHAQTEVAKKYGLKPPTL_______ QTEVAKKYGLKPPTL_______________ K Y G T L - 0 0 0 0 0 0 0 1 0 0 2 1 0 0 2 0 1 0 1 0 0 0 8 1 887.51165 O94826 O94826 601 608 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 2 0.043454 133.81 By MS/MS 5 0 1 1 1581000 1581000 0 16092 353 17038 40931 28880 28880 1 64984 0 YGLNMCR RSCRVCSNRHGLIRKYGLNMCRQCFRQYAK NRHGLIRKYGLNMCRQCFRQYAKDIGFIKL K Y G C R Q 0 1 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 7 0 912.39459 P62273 P62273 34 40 RPS29 40S ribosomal protein S29 yes yes 2 0.02238 113.08 By MS/MS By matching 10 0 2 1 1 449010 423800 25210 16093 1125 17039 40932;40933 28881 28881 881 1 450450 646630 YGLSGSDVLDNVAYAR EGTFRPERLLAVAERYGLSGSDVLDNVAYA GLSGSDVLDNVAYARAFNTDHQTQLLYQAS R Y G A R A 2 1 1 2 0 0 0 2 0 0 2 0 0 0 0 2 0 0 2 2 0 0 16 0 1698.8213 Q06609 Q06609 178 193 RAD51 DNA repair protein RAD51 homolog 1 yes yes 2 7.6144E-11 193 By MS/MS 7.5 0.5 1 1 2 712800 712800 0 16094 1276 17040 40934;40935 28882 28882 1 23039 0 YGNANAWR QITQVYGFYDECQTKYGNANAWRYCTKVFD YDECQTKYGNANAWRYCTKVFDMLTVAALI K Y G W R Y 2 1 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 8 0 950.43586 O00743 O00743 133 140 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 2 0.014856 128.86 By MS/MS 8 0 1 1 373420 373420 0 16095 106 17041 40936 28883 28883 1 24634 0 YGNQLVR QEFYQDDELGKKQFKYGNQLVRLAHREQVA ELGKKQFKYGNQLVRLAHREQVALYVDLDD K Y G V R L 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 0 848.45045 P33993 P33993 33 39 MCM7 DNA replication licensing factor MCM7 yes yes 2 0.0066588 170.43 By MS/MS 5 0 1 1 5447200 5447200 0 16096 775 17042 40937 28884 28884 1 223900 0 YGPADVEDTTGSGATDSK KEKASLPGVKKALGKYGPADVEDTTGSGAT ADVEDTTGSGATDSKDDDDIDLFGSDDEEE K Y G S K D 2 0 0 3 0 0 1 3 0 0 0 1 0 0 1 2 3 0 1 1 0 0 18 0 1769.7592 P24534 P24534 79 96 EEF1B2 Elongation factor 1-beta yes yes 2 4.3155E-25 260.5 By MS/MS 8 0 1 1 473330 473330 0 16097 677 17043 40938 28885 28885 1 31226 0 YGPEGEAVPVAIPEER PPKPPAWAWAEGWTRYGPEGEAVPVAIPEE GPEGEAVPVAIPEERALVFDVEVCLAEGTC R Y G E R A 2 1 0 0 0 0 4 2 0 1 0 0 0 0 3 0 0 0 1 2 0 0 16 0 1711.8417 P54098 P54098 178 193 POLG DNA polymerase subunit gamma-1 yes yes 2 0.0011012 144.47 By MS/MS 4 0.816 1 1 1 3 2627300 2627300 0 16098 1011 17044 40939;40940;40941 28886 28886 1 71223 0 YGPFVADFADK TALSVLGVMVYGIKKYGPFVADFADKLNEQ GIKKYGPFVADFADKLNEQKLAQLEEAKQA K Y G D K L 2 0 0 2 0 0 0 1 0 0 0 1 0 2 1 0 0 0 1 1 0 0 11 0 1228.5764 P24539 P24539 116 126 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 2 0.0010579 132.88 By MS/MS 9 0.816 1 1 1 3 6192600 6192600 0 16099 678 17045 40942;40943;40944 28887 28887 1 3461800 0 YGQHGSGSR SRGERHRSSSGSSSSYGQHGSGSRQSLGHG SGSSSSYGQHGSGSRQSLGHGRQGSGSRQS S Y G S R Q 0 1 0 0 0 1 0 3 1 0 0 0 0 0 0 2 0 0 1 0 0 0 9 0 947.42094 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 283 291 HRNR Hornerin yes no 2 0.001203 138.4 By MS/MS By MS/MS 4.83 2.79 1 2 2 1 2 1 1 1 1 6 6 2282800 710940 1571900 + 16100 64 17046 40945;40946;40947;40948;40949;40950;40951;40952;40953;40954;40955;40956 28888;28889;28890;28891;28892;28893;28894;28895;28896;28897 28895 10 190640 2921800 YGQNGDFTR SGGVSVPALWSEVNRYGQNGDFTRALKTVN WSEVNRYGQNGDFTRALKTVNKILQINKDD R Y G T R A 0 1 1 1 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 9 0 1056.4625 O76094 O76094 21 29 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.0007076 148.69 By MS/MS 5 0 1 1 1376600 1376600 0 16101 346 17047 40957 28898 28898 1 56585 0 YGQQGSGSGQSPSR SSHGQHGSGSSQSSRYGQQGSGSGQSPSRG RYGQQGSGSGQSPSRGRHGSDFGHSSSYGQ R Y G S R G 0 1 0 0 0 3 0 4 0 0 0 0 0 0 1 4 0 0 1 0 0 0 14 0 1394.6175 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 649 662 HRNR Hornerin yes no 2 1.7284E-05 162.31 By MS/MS By MS/MS 5.07 2.89 1 3 2 1 2 1 1 2 2 6 9 2103500 865630 1237800 + 16102 64 17048 40958;40959;40960;40961;40962;40963;40964;40965;40966;40967;40968;40969;40970;40971;40972 28899;28900;28901;28902;28903;28904;28905;28906;28907;28908;28909;28910 28901 12 178110 4370100 YGSDIVPFSK DETEVLKEDIIQGFRYGSDIVPFSKVDEEQ IQGFRYGSDIVPFSKVDEEQMKYKSEGKCF R Y G S K V 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 2 0 0 1 1 0 0 10 0 1111.555 P13010 P13010 316 325 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.00069522 136.99 By MS/MS 5 0 1 1 1446100 1446100 0 16103 570 17049 40973 28911 28911 1 59439 0 YGSGGGSKGGSISGGGYGSGGGK ISGGGYGSGGGSGGRYGSGGGSKGGSISGG GGSISGGGYGSGGGKHSSGGGSRGGSSSGG R Y G G K H 0 0 0 0 0 0 0 13 0 1 0 2 0 0 0 5 0 0 2 0 0 0 23 1 1889.8504 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 573 595 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.033252 44.953 By MS/MS 5.5 1.12 1 1 1 1 4 149390 0 149390 + 16104 52 17050 40974;40975;40976;40977 28912 28912 1 0 446250 YGSGSGQQSVTGVEASDDANSYWR LNTHHRVRLHSHDIKYGSGSGQQSVTGVEA VTGVEASDDANSYWRIRGGSEGGCPRGSPV K Y G W R I 2 1 1 2 0 2 1 4 0 0 0 0 0 0 0 5 1 1 2 2 0 0 24 0 2520.0789 Q9HCN8 Q9HCN8 60 83 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 2;3 8.8068E-31 210.43 By MS/MS 9 0 2 2 1318300 1318300 0 16105 2563 17051 40978;40979 28913;28914 28913 2 756570 0 YGTDLSR SMDDHKLSLDELHRKYGTDLSRGLTSARAA SLDELHRKYGTDLSRGLTSARAAEILARDG K Y G S R G 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 7 0 810.38718 P05023 P05023 55 61 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.034785 111.65 By MS/MS 3 1.41 1 1 1 1 1 5 13215000 13215000 0 16106 463 17052 40980;40981;40982;40983;40984 28915;28916 28916 2 487910 0 YGVAWEK LVHREARDEYHCKKKYGVAWEKYCQRVPYR DEYHCKKKYGVAWEKYCQRVPYRIFPYIY_ K Y G E K Y 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 7 0 851.41775 Q14739 Q14739 595 601 LBR Lamin-B receptor yes yes 2 0.049192 101.69 By MS/MS 1 0 1 1 246980 246980 0 16107 1445 17053 40985 28917 28917 1 12067 0 YGVIILDEAHER GMLLREAMNDPLLERYGVIILDEAHERTLA LERYGVIILDEAHERTLATDILMGVLKEVV R Y G E R T 1 1 0 1 0 0 2 1 1 2 1 0 0 0 0 0 0 0 1 1 0 0 12 0 1413.7252 O43143 O43143 254 265 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2;3 0.0021907 120.09 By MS/MS 4 0 2 2 1222100 1222100 0 16108 181 17054 40986;40987 28918;28919 28919 2 33361 0 YGVIIVGNPK LNDPRRLNVALTRARYGVIIVGNPKALSKQ LTRARYGVIIVGNPKALSKQPLWNHLLNYY R Y G P K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 1 0 0 0 1 2 0 0 10 0 1058.6124 Q92900 Q92900 879 888 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.00033844 151.29 By MS/MS 3 0 1 1 792270 792270 0 16109 2088 17055 40988 28920 28920 1 20682 0 YGVMDTTTAQGR HTNLSVNAITADGSRYGVMDTTTAQGRSPV GSRYGVMDTTTAQGRSPVEVAQDVLAAVGK R Y G G R S 1 1 0 1 0 1 0 2 0 0 0 0 1 0 0 0 3 0 1 1 0 0 12 0 1298.5925 Q6IAN0 Q6IAN0 256 267 DHRS7B Dehydrogenase/reductase SDR family member 7B yes yes 2 5.2E-11 198.72 By MS/MS 8 0 1 1 499990 499990 0 16110 1682 17056 40989 28921 28921 1210 1 32984 0 YGVNPGPIVGTTR VTELTNEDLLDQLVKYGVNPGPIVGTTRKL VKYGVNPGPIVGTTRKLYEKKLLKLREQGT K Y G T R K 0 1 1 0 0 0 0 3 0 1 0 0 0 0 2 0 2 0 1 2 0 0 13 0 1329.7041 P42166;P42167 P42167 127 139 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0010038 138.76 By MS/MS By matching 6 0.707 1 2 1 3 1 23693000 23550000 143250 16111 846;845 17057 40990;40991;40992;40993 28922;28923;28924 28923 3 288690 439350 YGVTTLVR PTNATLNKFTEELKKYGVTTLVRVCDATYD FTEELKKYGVTTLVRVCDATYDKAPVEKEG K Y G V R V 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 1 2 0 0 8 0 907.51272 Q12974 Q12974 37 44 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 2 0.02399 101.6 By MS/MS By matching 10 0 2 1 1 394710 379120 15590 16112 1320 17058 40994;40995 28925 28925 1 402960 399880 YGYEIPVDMLCK QVQRARYEAANWKYKYGYEIPVDMLCKRIA KYKYGYEIPVDMLCKRIADISQVYTQNAEM K Y G C K R 0 0 0 1 1 0 1 1 0 1 1 1 1 0 1 0 0 0 2 1 0 0 12 0 1486.6836 P60900 P60900 105 116 PSMA6 Proteasome subunit alpha type-6 yes yes 2 0.013055 86.898 By MS/MS 8 0 1 1 644800 644800 0 16113 1077 17059 40996 28926 28926 852 1 42537 0 YHAASAEEQATIER MIQTLEAVKRKQFEKYHAASAEEQATIERN KYHAASAEEQATIERNPYTIFHQALKNCEP K Y H E R N 4 1 0 0 0 1 3 0 1 1 0 0 0 0 0 1 1 0 1 0 0 0 14 0 1574.7325 Q9Y2R9 Q9Y2R9 126 139 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 2;3 6.6055E-12 230.81 By MS/MS By MS/MS 8.67 0.745 3 2 1 5 1 16245000 16175000 69171 16114 2899 17060 40997;40998;40999;41000;41001;41002 28927;28928;28929;28930;28931 28929 5 1402100 590110 YHDEADQSALQR KKKGEFPGEKSKRLRYHDEADQSALQRMTR RLRYHDEADQSALQRMTRLRVTWSMQEDGL R Y H Q R M 2 1 0 2 0 2 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 12 0 1431.6379 Q12789 Q12789 1246 1257 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2;3 0.0030137 139.32 By MS/MS 2 0.707 1 2 1 4 796020 796020 0 16115 1306 17061 41003;41004;41005;41006 28932;28933 28932 2 36428 0 YHGHSMSDPGVSYR RSGKGPILMELQTYRYHGHSMSDPGVSYRT RYHGHSMSDPGVSYRTREEIQEVRSKSDPI R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 3 0.0084313 101.32 By MS/MS 7 0 2 2 3554300 3554300 0 16116 504 17062;17063 41007;41008 28934;28935 28935 305 2 63516 0 YHPDKNKEPGAEEK SDEEIKRAYRRQALRYHPDKNKEPGAEEKF RYHPDKNKEPGAEEKFKEIAEAYDVLSDPR R Y H E K F 1 0 1 1 0 0 3 1 1 0 0 3 0 0 2 0 0 0 1 0 0 0 14 2 1640.7794 P25685 P25685 31 44 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 3 0.019534 78.287 By MS/MS 7.5 0.5 1 1 2 954590 954590 0 16117 686 17064 41009;41010 28936 28936 1 21703 0 YHPDKNPNEGEK TQEELKKAYRKLALKYHPDKNPNEGEKFKQ ALKYHPDKNPNEGEKFKQISQAYEVLSDAK K Y H E K F 0 0 2 1 0 0 2 1 1 0 0 2 0 0 2 0 0 0 1 0 0 0 12 1 1426.6477 P31689 P31689 33 44 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 0.017925 117.25 By MS/MS 7.62 1.32 2 2 2 1 1 8 26526000 26526000 0 16118 755 17065 41011;41012;41013;41014;41015;41016;41017;41018 28937;28938 28938 2 298420 0 YHPDTNKDDPK SQKEIKKAYYQLAKKYHPDTNKDDPKAKEK LAKKYHPDTNKDDPKAKEKFSQLAEAYEVL K Y H P K A 0 0 1 3 0 0 0 0 1 0 0 2 0 0 2 0 1 0 1 0 0 0 11 1 1328.5997 Q96EY1 Q96EY1 120 130 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes yes 2 0.033315 109.79 By MS/MS 7 0 1 1 1348200 1348200 0 16119 2169 17066 41019 28939 28939 1 24093 0 YHSDDYIK EIYRPHKANAEEMTKYHSDDYIKFLRSIRP NAEEMTKYHSDDYIKFLRSIRPDNMSEYSK K Y H I K F 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 1 0 0 2 0 0 0 8 0 1039.4611 Q13547 Q13547 67 74 HDAC1 Histone deacetylase 1 yes yes 2 0.0104 119.17 By MS/MS 6 0 1 1 3837700 3837700 0 16120 1380 17067 41020 28940 28940 1 29927 0 YHTEIVFAR DLKDMTSEQLDDILKYHTEIVFARTSPQQK LDDILKYHTEIVFARTSPQQKLIIVEGCQR K Y H A R T 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 9 0 1134.5822 P05023 P05023 684 692 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.0023712 125.81 By MS/MS 2.67 1.25 1 1 1 3 2677000 2677000 0 16121 463 17068 41021;41022;41023 28941;28942;28943 28941 3 87472 0 YHTSQSGDEMTSLSEYVSR HEDSTNRRRLSELLRYHTSQSGDEMTSLSE QSGDEMTSLSEYVSRMKETQKSIYYITGES R Y H S R M 0 1 0 1 0 1 2 1 1 0 1 0 1 0 0 5 2 0 2 1 0 0 19 0 2175.9379 P08238 P08238 457 475 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 4.2643E-05 127.67 By MS/MS 4.29 0.7 1 3 3 7 23141000 23141000 0 16122 501 17069;17070 41024;41025;41026;41027;41028;41029;41030 28944;28945;28946;28947;28948 28947 300 5 756280 0 YIAENGTDPINNQPLSEEQLIDIK SPVSNHVYERRLIEKYIAENGTDPINNQPL INNQPLSEEQLIDIKVAHPIRPKPPSATSI K Y I I K V 1 0 3 2 0 2 3 1 0 4 2 1 0 0 2 1 1 0 1 0 0 0 24 0 2713.3447 Q9UMS4 Q9UMS4 33 56 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 6.4971E-06 101.9 By MS/MS 6 0 1 1 3258000 3258000 0 16123 2834 17071 41031 28949 28949 1 25406 0 YICDNQDTISSK GDLLECADDRADLAKYICDNQDTISSKLKE LAKYICDNQDTISSKLKECCDKPLLEKSHC K Y I S K L 0 0 1 2 1 1 0 0 0 2 0 1 0 0 0 2 1 0 1 0 0 0 12 0 1442.6348 CON__P02769 CON__P02769 286 297 yes yes 2 2.0372E-16 217.22 By MS/MS By matching 6.83 1.77 2 1 1 1 1 5 1 5075600 5060100 15501 + 16124 43 17072 41032;41033;41034;41035;41036;41037 28950;28951 28950 2 126570 45869 YICENQDSISSK GDLLECADDRADLAKYICENQDSISSKLKE LAKYICENQDSISSKLKECCEKPLLEKSHC K Y I S K L 0 0 1 1 1 1 1 0 0 2 0 1 0 0 0 3 0 0 1 0 0 0 12 0 1442.6348 CON__P02768-1;P02768 CON__P02768-1 287 298 ALB Serum albumin yes no 2 0.0048071 107.11 By MS/MS 6 0 1 1 101850 0 101850 + 16125 42 17073 41038 28952;28953 28952 2 0 312370 YIDQEELNK SGKDKKKKTKKIKEKYIDQEELNKTKPIWT KKIKEKYIDQEELNKTKPIWTRNPDDITQE K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P07900;Q14568;P08238;Q58FF8 P08238 276 284 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 4.0051E-08 204.42 By MS/MS By MS/MS 4.11 1.79 1 1 1 2 2 1 1 7 2 114680000 114280000 405590 16126 501;494 17074 41039;41040;41041;41042;41043;41044;41045;41046;41047 28954;28955;28956;28957;28958;28959;28960;28961;28962 28958 9 3413500 1026400 YIDQEELNKTKPIWTR SGKDKKKKTKKIKEKYIDQEELNKTKPIWT IDQEELNKTKPIWTRNPDDITQEEYGEFYK K Y I T R N 0 1 1 1 0 1 2 0 0 2 1 2 0 0 1 0 2 1 1 0 0 0 16 2 2033.0582 P07900;Q14568;P08238;Q58FF8 P08238 276 291 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 3 0.0046343 95.751 By MS/MS 4 0 1 1 2007400 2007400 0 16127 501;494 17075 41048 28963 28963 1 54800 0 YIDSADLEPITSQEEPVR LEHSALAINHKLEIKYIDSADLEPITSQEE SADLEPITSQEEPVRYHEAWQKLCSAHGVL K Y I V R Y 1 1 0 2 0 1 3 0 0 2 1 0 0 0 2 2 1 0 1 1 0 0 18 0 2060.9902 P17812 P17812 336 353 CTPS1 CTP synthase 1 yes yes 2 1.6038E-10 178.67 By MS/MS 5 0 1 1 1720000 1720000 0 16128 615 17076 41049 28964 28964 1 70698 0 YIEDKDVFQK AELEDTLNQVMVVFKYIEDKDVFQKFYAKM MVVFKYIEDKDVFQKFYAKMLAKRLVHQNS K Y I Q K F 0 0 0 2 0 1 1 0 0 1 0 2 0 1 0 0 0 0 1 1 0 0 10 1 1283.6398 Q13616 Q13616 455 464 CUL1 Cullin-1 yes yes 2;3 0.002609 128.6 By MS/MS 4.5 0.5 2 2 4 4234400 4234400 0 16129 1387 17077 41050;41051;41052;41053 28965;28966;28967 28966 3 153720 0 YIEIFPSRR ANQALLKHREEIGNRYIEIFPSRRNEVRTH EEIGNRYIEIFPSRRNEVRTHVGSYKGKKI R Y I R R N 0 2 0 0 0 0 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 0 9 1 1179.64 Q12849 Q12849 318 326 GRSF1 G-rich sequence factor 1 yes yes 2 0.0090239 143.61 By MS/MS 6 0 1 1 2058600 2058600 0 16130 1310 17078 41054 28968 28968 1 16053 0 YIEIYVQK VHDLVLYLYRNNLQKYIEIYVQKVNPSRLP YRNNLQKYIEIYVQKVNPSRLPVVIGGLLD K Y I Q K V 0 0 0 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 8 0 1054.5699 Q00610;P53675 Q00610 799 806 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.018685 108.46 By MS/MS 2 1 1 1 2 752960 752960 0 16131 1235 17079 41055;41056 28969;28970 28969 2 22896 0 YIELFLNSCPK AVAAMLKDRSHVHHRYIELFLNSCPKGK__ VHHRYIELFLNSCPKGK_____________ R Y I P K G 0 0 1 0 1 0 1 0 0 1 2 1 0 1 1 1 0 0 1 0 0 0 11 0 1382.6904 Q12849 Q12849 468 478 GRSF1 G-rich sequence factor 1 yes yes 2 3.907E-11 210.08 By MS/MS 6 0 1 1 3392700 3392700 0 16132 1310 17080 41057 28971 28971 1 26457 0 YIELLTR PSGVILQEAADVHARYIELLTRSGDYYRFL EAADVHARYIELLTRSGDYYRFLSEMLKSL R Y I T R S 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 1 0 1 0 0 0 7 0 906.51747 P15924 P15924 1003 1009 DSP Desmoplakin yes yes 2 0.041051 107.32 By MS/MS 6.5 0.5 1 1 2 123580 0 123580 16133 603 17081 41058;41059 28972 28972 1 0 414080 YIESPVLFLR SIIRHRESTPKVVSKYIESPVLFLREDVGK KVVSKYIESPVLFLREDVGKVKFDIRYIVL K Y I L R E 0 1 0 0 0 0 1 0 0 1 2 0 0 1 1 1 0 0 1 1 0 0 10 0 1235.6914 Q14166 Q14166 452 461 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 2 0.00088088 128.38 By MS/MS 5.5 0.5 1 1 2 1156700 1156700 0 16134 1414 17082 41060;41061 28973 28973 1 19956 0 YIETSELCGGAR KFATEYCNTIEGTAKYIETSELCGGARICY TAKYIETSELCGGARICYIFHETFGRTLES K Y I A R I 1 1 0 0 1 0 2 2 0 1 1 0 0 0 0 1 1 0 1 0 0 0 12 0 1354.6187 O00429 O00429 354 365 DNM1L Dynamin-1-like protein yes yes 2 3.8633E-11 206.43 By MS/MS 5 0 1 1 1296900 1296900 0 16135 94 17083 41062 28974 28974 1 53308 0 YIFDAECALEK EYSDKSLYTQLCFYRYIFDAECALEKLTTD CFYRYIFDAECALEKLTTDHEKDKLKKQFF R Y I E K L 2 0 0 1 1 0 2 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 11 0 1357.6224 P09884 P09884 1397 1407 POLA1 DNA polymerase alpha catalytic subunit yes yes 2 0.023933 85.807 By MS/MS 2 0.816 1 1 1 3 464600 464600 0 16136 522 17084 41063;41064;41065 28975 28975 1 15744 0 YIGASEQAVR RMNFISVKGPELLSKYIGASEQAVRDIFIR ELLSKYIGASEQAVRDIFIRAQAAKPCILF K Y I V R D 2 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 10 0 1092.5564 O43933 O43933 914 923 PEX1 Peroxisome biogenesis factor 1 yes yes 2 0.0099649 106.88 By MS/MS 3 0 1 1 981570 981570 0 16137 235 17085 41066 28976 28976 1 25624 0 YIGEVGDIVVGR ERVNKLICVKALKTRYIGEVGDIVVGRITE KTRYIGEVGDIVVGRITEVQQKRWKVETNS R Y I G R I 0 1 0 1 0 0 1 3 0 2 0 0 0 0 0 0 0 0 1 3 0 0 12 0 1275.6823 Q13868 Q13868 76 87 EXOSC2 Exosome complex component RRP4 yes yes 2 0.0004945 136.52 By MS/MS 8 0 1 1 1167600 1167600 0 16138 1399 17086 41067 28977 28977 0 77030 0 YIIEELNVR HQDPEALKDIKSLEKYIIEELNVRKVTLST IKSLEKYIIEELNVRKVTLSTDKNKYGIRL K Y I V R K 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1147.6237 P41252 P41252 869 877 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2 0.00091248 144.09 By MS/MS 3.5 0.5 1 1 2 8616200 8616200 0 16139 840 17087 41068;41069 28978;28979 28978 2 224930 0 YIIEELNVRK HQDPEALKDIKSLEKYIIEELNVRKVTLST KSLEKYIIEELNVRKVTLSTDKNKYGIRLR K Y I R K V 0 1 1 0 0 0 2 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 10 1 1275.7187 P41252 P41252 869 878 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 2;3 0.00287 146.23 By MS/MS 3 0 2 2 2187200 2187200 0 16140 840 17088 41070;41071 28980;28981 28980 2 57098 0 YIIGMLER YGRCHEEIGPFTDTRYIIGMLERCTDKLER GPFTDTRYIIGMLERCTDKLERDRLILFLN R Y I E R C 0 1 0 0 0 0 1 1 0 2 1 0 1 0 0 0 0 0 1 0 0 0 8 0 993.53174 O75165 O75165 896 903 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.048283 83.265 By MS/MS 2 0 1 1 154250 154250 0 16141 287 17089 41072 28982 28982 1 7666.9 0 YIIIGDTGVGK ______________________________ YLFKYIIIGDTGVGKSCLLLQFTDKRFQPV K Y I G K S 0 0 0 1 0 0 0 3 0 3 0 1 0 0 0 0 1 0 1 1 0 0 11 0 1134.6285 P61019;Q8WUD1 P61019 9 19 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 2 0.021714 87.806 By MS/MS 9 0 1 1 622750 622750 0 16142 1083 17090 41073 28983 28983 1 357400 0 YIMAGFPVCPK VERNPPAFTELQLPRYIMAGFPVCPKLSLE QLPRYIMAGFPVCPKLSLEFGDPASSLFRW R Y I P K L 1 0 0 0 1 0 0 1 0 1 0 1 1 1 2 0 0 0 1 1 0 0 11 0 1281.625 Q6L8Q7 Q6L8Q7 172 182 PDE12 2,5-phosphodiesterase 12 yes yes 2 0.00035832 141.78 By MS/MS 5 0 1 1 970780 970780 0 16143 1687 17091 41074 28984;28985 28984 1211 2 39903 0 YIMVPSGNMGVFDPTEIHNR IFLLNLPVATWNIYRYIMVPSGNMGVFDPT SGNMGVFDPTEIHNRGQLKSHMKEAMIKLG R Y I N R G 0 1 2 1 0 0 1 2 1 2 0 0 2 1 2 1 1 0 1 2 0 0 20 0 2276.0718 Q9P003 Q9P003 85 104 CNIH4 Protein cornichon homolog 4 yes yes 3 0.0092468 61.957 By MS/MS 5.5 4.5 1 1 2 667720 667720 0 16144 2720 17092 41075;41076 28986;28987 28987 1583;1584 2 544950 0 YINENLIVNTDELGR SVISGYRLACKEAVRYINENLIVNTDELGR YINENLIVNTDELGRDCLINAAKTSMSSKI R Y I G R D 0 1 3 1 0 0 2 1 0 2 2 0 0 0 0 0 1 0 1 1 0 0 15 0 1761.8897 P17987 P17987 131 145 TCP1 T-complex protein 1 subunit alpha yes yes 2 5.2717E-77 314.35 By MS/MS 6.14 3.18 1 1 1 1 1 1 1 7 94333000 94333000 0 16145 619 17093 41077;41078;41079;41080;41081;41082;41083 28988;28989;28990;28991;28992 28990 5 1245400 0 YINENLIVNTDELGRDCLINAAK SVISGYRLACKEAVRYINENLIVNTDELGR NTDELGRDCLINAAKTSMSSKIIGINGDFF R Y I A K T 2 1 4 2 1 0 2 1 0 3 3 1 0 0 0 0 1 0 1 1 0 0 23 1 2647.3276 P17987 P17987 131 153 TCP1 T-complex protein 1 subunit alpha yes yes 2;3 5.7408E-11 146.18 By MS/MS 6 0 2 2 77800000 77800000 0 16146 619 17094 41084;41085 28993;28994 28993 2 606690 0 YINVGDLAR KTTLGKELASKSGLKYINVGDLAREEQLYD SKSGLKYINVGDLAREEQLYDGYDEEYDCP K Y I A R E 1 1 1 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1019.54 Q9Y3D8 Q9Y3D8 31 39 AK6 Adenylate kinase isoenzyme 6 yes yes 2 0.0059227 113.71 By MS/MS 9.5 0.5 1 1 2 1535500 1535500 0 16147 2934 17095 41086;41087 28995;28996 28995 2 966700 0 YIPIQYVLSR RCEKDERFFSDKIAKYIPIQYVLSRYPSYG DKIAKYIPIQYVLSRYPSYGLNYYQQKPVA K Y I S R Y 0 1 0 0 0 1 0 0 0 2 1 0 0 0 1 1 0 0 2 1 0 0 10 0 1250.7023 CON__P02668 CON__P02668 25 34 yes yes 2 0.00097847 123.86 By MS/MS 5 0 1 1 792220 792220 0 + 16148 40 17096 41088 28997 28997 1 32563 0 YIQAACK GSIVNFSQDPDVHFKYIQAACKTGQIKEVE QDPDVHFKYIQAACKTGQIKEVERICRESN K Y I C K T 2 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 852.41637 Q00610;P53675 Q00610 731 737 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.038642 108.98 By MS/MS 1 0 1 1 350870 350870 0 16149 1235 17097 41089 28998 28998 1 17143 0 YIQAEPPTNK QFDNVRLWLGKNYKKYIQAEPPTNKSLSSL KNYKKYIQAEPPTNKSLSSLVVQLLQFQEE K Y I N K S 1 0 1 0 0 1 1 0 0 1 0 1 0 0 2 0 1 0 1 0 0 0 10 0 1159.5873 Q8TAQ2 Q8TAQ2 38 47 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 2 0.045697 79.974 By MS/MS 3 0 1 1 278910 278910 0 16150 1983 17098 41090 28999 28999 1 7280.9 0 YIQEQNEK CMETHYEKVLKKVSKYIQEQNEKIYAPQGL VLKKVSKYIQEQNEKIYAPQGLLLTDPIER K Y I E K I 0 0 1 0 0 2 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 0 1050.4982 Q7Z5G4;Q2TAP0 Q7Z5G4 96 103 GOLGA7;GOLGA7B Golgin subfamily A member 7;Golgin subfamily A member 7B yes no 2 0.0084904 124.08 By MS/MS 10 0 1 1 510840 510840 0 16151 1799 17099 41091 29000 29000 1 542970 0 YIQPWESEFIDSQR GMSHEEDQLIPNLYRYIQPWESEFIDSQRV RYIQPWESEFIDSQRVWAEYALKRQEAIAQ R Y I Q R V 0 1 0 1 0 2 2 0 0 2 0 0 0 1 1 2 0 1 1 0 0 0 14 0 1796.837 Q6P2Q9 Q6P2Q9 1371 1384 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0079321 97.86 By MS/MS 3 0 1 1 251420 251420 0 16152 1706 17100 41092 29001 29001 1 6563.3 0 YISAAPGAEAK SSSLNLGGLTNGSGRYISAAPGAEAKYRSA GSGRYISAAPGAEAKYRSASSASSLFSPSS R Y I A K Y 4 0 0 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 1 0 0 0 11 0 1076.5502 Q14671;Q8TB72 Q14671 784 794 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 yes no 2 0.024085 85.67 By MS/MS 5 1.41 1 1 1 1 1 5 4949900 4949900 0 16153 1438 17101 41093;41094;41095;41096;41097 29002 29002 1 92781 0 YISCVFAEESDLSR VKGFMEDEGRQRTTKYISCVFAEESDLSRQ KYISCVFAEESDLSRQYQREKARSELLTTV K Y I S R Q 1 1 0 1 1 0 2 0 0 1 1 0 0 1 0 3 0 0 1 1 0 0 14 0 1674.7559 Q12789 Q12789 428 441 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 6.945E-05 151.98 By MS/MS 2.5 0.5 1 1 2 653070 653070 0 16154 1306 17102 41098;41099 29003 29003 1 27209 0 YISPDQLADLYK GKYDLDFKSPDDPSRYISPDQLADLYKSFI PSRYISPDQLADLYKSFIKDYPVVSIEDPF R Y I Y K S 1 0 0 2 0 1 0 0 0 1 2 1 0 0 1 1 0 0 2 0 0 0 12 0 1424.7187 P06733 P06733 270 281 ENO1 Alpha-enolase yes yes 2 0.00028019 147.28 By MS/MS 7 0.816 1 1 1 3 15500000 15500000 0 16155 482 17103 41100;41101;41102 29004;29005 29004 2 137100 0 YIVIEPTR QFEYELEQALEAQYKYIVIEPTRIGDETAR ALEAQYKYIVIEPTRIGDETARWITVGNCL K Y I T R I 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 0 1 0 1 1 0 0 8 0 989.55458 P17152 P17152 59 66 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.038372 95.909 By MS/MS 9.5 0.5 1 1 2 4288800 4288800 0 16156 612 17104 41103;41104 29006 29006 1 2526200 0 YIVLAKDFEK SICQESGMLAVRENRYIVLAKDFEKAYKTV VRENRYIVLAKDFEKAYKTVIKKDEQEHEF R Y I E K A 1 0 0 1 0 0 1 0 0 1 1 2 0 1 0 0 0 0 1 1 0 0 10 1 1224.6754 P43686 P43686 392 401 PSMC4 26S protease regulatory subunit 6B yes yes 2 0.0072281 123.86 By MS/MS 8 1.41 1 1 1 1 1 5 6775800 6775800 0 16157 867 17105 41105;41106;41107;41108;41109 29007 29007 1 229850 0 YIVTCVIMQK EQTLSQLTKLGKPFKYIVTCVIMQKNGAGL GKPFKYIVTCVIMQKNGAGLHTASSCFWDS K Y I Q K N 0 0 0 0 1 1 0 0 0 2 0 1 1 0 0 0 1 0 1 2 0 0 10 0 1253.6512 P63172 P63172 63 72 DYNLT1 Dynein light chain Tctex-type 1 yes yes 2 0.052164 72.879 By MS/MS 10 0 1 1 106390 106390 0 16158 1172 17106 41110 29008 29008 1 113080 0 YIYDSAFHPDTGEK IVPPGLTENELWRAKYIYDSAFHPDTGEKM KYIYDSAFHPDTGEKMILIGRMSAQVPMNM K Y I E K M 1 0 0 2 0 0 1 1 1 1 0 1 0 1 1 1 1 0 2 0 0 0 14 0 1641.7311 Q9H9B4 Q9H9B4 73 86 SFXN1 Sideroflexin-1 yes yes 2 9.3376E-26 242.45 By MS/MS 7.5 0.5 1 1 2 12923000 12923000 0 16159 2533 17107 41111;41112 29009 29009 1 844540 0 YKAEDEKQR LSKEDIERMVQEAEKYKAEDEKQRDKVSSK VQEAEKYKAEDEKQRDKVSSKNSLESYAFN K Y K Q R D 1 1 0 1 0 1 2 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1165.5728 P11142 P11142 525 533 HSPA8 Heat shock cognate 71 kDa protein yes yes 2;3 0.013376 133.99 By MS/MS By matching 5.25 0.433 3 1 3 1 1782300 1775400 6944.9 16160 546 17108 41113;41114;41115;41116 29010;29011 29011 2 59141 20550 YKAEDEVQR LSKEEIERMVQEAEKYKAEDEVQRERVSAK VQEAEKYKAEDEVQRERVSAKNALESYAFN K Y K Q R E 1 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 9 1 1136.5462 P0DMV9;P0DMV8 P0DMV9 525 533 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.00051438 172.59 By MS/MS 5.33 0.471 2 1 3 3546800 3546800 0 16161 528 17109 41117;41118;41119 29012;29013 29012 2 130430 0 YKAEDEVQRER LSKEEIERMVQEAEKYKAEDEVQRERVSAK EAEKYKAEDEVQRERVSAKNALESYAFNMK K Y K E R V 1 2 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 11 2 1421.6899 P0DMV9;P0DMV8 P0DMV9 525 535 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 1.9072E-05 176.6 By MS/MS 5.5 0.5 1 1 2 742730 742730 0 16162 528 17110 41120;41121 29014 29014 1 25238 0 YKDAIHFYNK KAYARIGNSYFKEEKYKDAIHFYNKSLAEH FKEEKYKDAIHFYNKSLAEHRTPDVLKKCQ K Y K N K S 1 0 1 1 0 0 0 0 1 1 0 2 0 1 0 0 0 0 2 0 0 0 10 1 1297.6455 P31948 P31948 316 325 STIP1 Stress-induced-phosphoprotein 1 yes yes 2;3 0.0020244 129.85 By MS/MS 6.17 1.07 2 2 1 1 6 7077300 7077300 0 16163 762 17111 41122;41123;41124;41125;41126;41127 29015;29016;29017 29016 3 124600 0 YKDQTGGYTR EKDLIPKLFQVLAPRYKDQTGGYTRMLQIP VLAPRYKDQTGGYTRMLQIPNRSLDRAKMA R Y K T R M 0 1 0 1 0 1 0 2 0 0 0 1 0 0 0 0 2 0 2 0 0 0 10 1 1187.5571 Q9NRX2 Q9NRX2 97 106 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 2;3 0.0010576 160.75 By MS/MS By matching 9 0 3 2 1 1776500 1756100 20389 16164 2614 17112 41128;41129;41130 29018;29019 29018 2 1007900 219730 YKGNGGVYGWDLK RKQKEGNFDIVSGTRYKGNGGVYGWDLKRK TRYKGNGGVYGWDLKRKIISRGANFLTQIL R Y K L K R 0 0 1 1 0 0 0 4 0 0 1 2 0 0 0 0 0 1 2 1 0 0 13 1 1455.7147 O60762 O60762 148 160 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.013588 121.02 By MS/MS 8 0 1 1 1819600 1819600 0 16165 263 17113 41131 29020 29020 1 120040 0 YKHPSEEELR CSFARWLLCNGSLFRYKHPSEEELRALAGK GSLFRYKHPSEEELRALAGKPRPRGRKERW R Y K L R A 0 1 0 0 0 0 3 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 10 1 1286.6255 Q9NX61 Q9NX61 40 49 TMEM161A Transmembrane protein 161A yes yes 3 0.012715 99.343 By MS/MS 1 0 1 1 603100 603100 0 16166 2681 17114 41132 29021 29021 1 29466 0 YKQIFLGGVDK RYFPTQALNFAFKDKYKQIFLGGVDKRTQF FKDKYKQIFLGGVDKRTQFWLYFAGNLASG K Y K D K R 0 0 0 1 0 1 0 2 0 1 1 2 0 1 0 0 0 0 1 1 0 0 11 1 1266.6972 P05141;P12236 P05141 95 105 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 2;3 0.00090265 158.47 By MS/MS By matching 6 3.31 2 1 1 1 1 3 2 2 12 1 37840000 37801000 38950 16167 469;563 17115 41133;41134;41135;41136;41137;41138;41139;41140;41141;41142;41143;41144;41145 29022;29023;29024;29025;29026 29023 5 3174000 332290 YKTIESETVR RRLEESDVLQEARRKYKTIESETVRTSEVL EARRKYKTIESETVRTSEVLRKKLGELTGT K Y K V R T 0 1 0 0 0 0 2 0 0 1 0 1 0 0 0 1 2 0 1 1 0 0 10 1 1224.635 O43615 O43615 104 113 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 2;3 4.4284E-06 187.99 By MS/MS 7 0.707 1 2 1 4 6559300 6559300 0 16168 209 17116 41146;41147;41148;41149 29027;29028 29028 2 119460 0 YKVDFIEEK EVEAKVALEIFQHSKYKVDFIEEKASQNPE IFQHSKYKVDFIEEKASQNPERIVKLHRIG K Y K E K A 0 0 0 1 0 0 2 0 0 1 0 2 0 1 0 0 0 0 1 1 0 0 9 1 1169.5968 Q9NYK5 Q9NYK5 235 243 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 2 0.0055351 147.75 By MS/MS By matching 8 0 2 1 1 9779000 9748700 30270 16169 2696 17117 41150;41151 29029 29029 1 643120 258240 YLAAGSSNAVK DFNPEEINLDCTNPRYLAAGSSNAVKLSRF TNPRYLAAGSSNAVKLSRFFDKVIEKRYFL R Y L V K L 3 0 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 0 1079.5611 Q5HYI8 Q5HYI8 185 195 RABL3 Rab-like protein 3 yes yes 2 0.0027596 131.62 By MS/MS By matching 8.75 0.829 2 1 1 3 1 8030400 8008400 21997 16170 1601 17118 41152;41153;41154;41155 29030 29030 1 953890 187660 YLAEAQGTYEELQR EMGVSYLPVNQNWERYLAEAQGTYEELQRE RYLAEAQGTYEELQREMKKSLMDLANDACQ R Y L Q R E 2 1 0 0 0 2 3 1 0 0 2 0 0 0 0 0 1 0 2 0 0 0 14 0 1669.7948 P54098 P54098 444 457 POLG DNA polymerase subunit gamma-1 yes yes 2 2.7596E-35 263.07 By MS/MS 3 0 1 1 1711400 1711400 0 16171 1011 17119 41156 29031 29031 1 44677 0 YLAEFATGNDR ESKVFYYKMKGDYHRYLAEFATGNDRKEAA DYHRYLAEFATGNDRKEAAENSLVAYKAAS R Y L D R K 2 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 11 0 1255.5833 P62258 P62258 131 141 YWHAE 14-3-3 protein epsilon yes yes 2 0.0015953 125.68 By MS/MS By MS/MS 8.33 0.471 2 1 2 1 20154000 20107000 46222 16172 1121 17120 41157;41158;41159 29032;29033 29033 2 1437000 394330 YLAEFATGNDRK ESKVFYYKMKGDYHRYLAEFATGNDRKEAA YHRYLAEFATGNDRKEAAENSLVAYKAASD R Y L R K E 2 1 1 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 12 1 1383.6783 P62258 P62258 131 142 YWHAE 14-3-3 protein epsilon yes yes 2 6.5533E-07 190.57 By MS/MS 8 0 1 1 12036000 12036000 0 16173 1121 17121 41160 29034 29034 1 794020 0 YLAEKYEWDVAEAR KGEVSARQELKQRARYLAEKYEWDVAEARK RYLAEKYEWDVAEARKIWCFGPDGTGPNIL R Y L A R K 3 1 0 1 0 0 3 0 0 0 1 1 0 0 0 0 0 1 2 1 0 0 14 1 1741.8312 P13639 P13639 634 647 EEF2 Elongation factor 2 yes yes 2;3 1.1329E-12 213.99 By MS/MS 4.75 0.829 2 1 1 4 15672000 15672000 0 16174 576 17122 41161;41162;41163;41164 29035;29036 29036 2 386420 0 YLAEKYEWDVAEARK KGEVSARQELKQRARYLAEKYEWDVAEARK YLAEKYEWDVAEARKIWCFGPDGTGPNILT R Y L R K I 3 1 0 1 0 0 3 0 0 0 1 2 0 0 0 0 0 1 2 1 0 0 15 2 1869.9261 P13639 P13639 634 648 EEF2 Elongation factor 2 yes yes 3 0.034743 66.246 By MS/MS 4 0 1 1 2396900 2396900 0 16175 576 17123 41165 29037 29037 1 65433 0 YLAEVAAGDDK ESKVFYLKMKGDYYRYLAEVAAGDDKKGIV DYYRYLAEVAAGDDKKGIVDQSQQAYQEAF R Y L D K K 3 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1150.5506 P63104 P63104 128 138 YWHAZ 14-3-3 protein zeta/delta yes yes 2 0.0018832 121.83 By MS/MS 8 0 1 1 2188400 2188400 0 16176 1169 17124 41166 29038 29038 1 144370 0 YLAEVAAGDDKK ESKVFYLKMKGDYYRYLAEVAAGDDKKGIV YYRYLAEVAAGDDKKGIVDQSQQAYQEAFE R Y L K K G 3 0 0 2 0 0 1 1 0 0 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1278.6456 P63104 P63104 128 139 YWHAZ 14-3-3 protein zeta/delta yes yes 2;3 2.1903E-23 242.49 By MS/MS By matching 8.2 0.4 4 1 3 2 12336000 12295000 41176 16177 1169 17125 41167;41168;41169;41170;41171 29039;29040 29039 2 843750 351280 YLAEVACGDDRK ESKVFYLKMKGDYFRYLAEVACGDDRKQTI YFRYLAEVACGDDRKQTIDNSQGAYQEAFD R Y L R K Q 2 1 0 2 1 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 12 1 1395.6453 P27348 P27348 128 139 YWHAQ 14-3-3 protein theta yes yes 2 0.00012284 169.99 By MS/MS By matching 4.75 2.54 1 1 1 1 1 1 2 1 7 1235000 953290 281660 16178 703 17126 41172;41173;41174;41175;41176;41177;41178;41179 29041 29041 1 62888 834830 YLAEVASGEK ESKVFYLKMKGDYYRYLAEVASGEKKNSVV GDYYRYLAEVASGEKKNSVVEASEAAYKEA R Y L E K K 2 0 0 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 10 0 1065.5342 Q04917 Q04917 133 142 YWHAH 14-3-3 protein eta yes yes 2 0.0012592 119.68 By MS/MS 8 0 1 1 1981000 1981000 0 16179 1268 17127 41180 29042 29042 1 130690 0 YLAEVASGEKK ESKVFYLKMKGDYYRYLAEVASGEKKNSVV DYYRYLAEVASGEKKNSVVEASEAAYKEAF R Y L K K N 2 0 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 1 1 0 0 11 1 1193.6292 Q04917 Q04917 133 143 YWHAH 14-3-3 protein eta yes yes 2;3 1.7773E-06 187.5 By MS/MS 8 0 2 2 2178200 2178200 0 16180 1268 17128 41181;41182 29043;29044 29043 2 143690 0 YLAEVATGEK ESKVFYLKMKGDYYRYLAEVATGEKRATVV GDYYRYLAEVATGEKRATVVESSEKAYSEA R Y L E K R 2 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1079.5499 P61981 P61981 133 142 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.0022919 116.3 By MS/MS 8 0 1 1 8097700 8097700 0 16181 1111 17129 41183 29045;29046 29045 2 534200 0 YLAEVATGEKR ESKVFYLKMKGDYYRYLAEVATGEKRATVV DYYRYLAEVATGEKRATVVESSEKAYSEAH R Y L K R A 2 1 0 0 0 0 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 11 1 1235.651 P61981 P61981 133 143 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 7.3261E-07 192.26 By MS/MS 8 0 1 1 1882200 1882200 0 16182 1111 17130 41184 29047 29047 1 124170 0 YLAIAPPIIK IIIGQESITYHNGDKYLAIAPPIIKQSTIV HNGDKYLAIAPPIIKQSTIVCHNRVDPNGS K Y L I K Q 2 0 0 0 0 0 0 0 0 3 1 1 0 0 2 0 0 0 1 0 0 0 10 0 1097.6849 Q16531 Q16531 245 254 DDB1 DNA damage-binding protein 1 yes yes 2 0.015315 95.62 By MS/MS 3.5 0.5 1 1 2 440130 440130 0 16183 1537 17131 41185;41186 29048 29048 1 11777 0 YLATCADDR HSGNISCMDFSSNGKYLATCADDRTIRIWS FSSNGKYLATCADDRTIRIWSTKDFLQREH K Y L D R T 2 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 9 0 1083.4655 Q9Y4P3 Q9Y4P3 104 112 TBL2 Transducin beta-like protein 2 yes yes 2 1.8728E-05 175.91 By MS/MS 7 0 1 1 1354400 1354400 0 16184 2957 17132 41187 29049 29049 1 24204 0 YLAVESPFLK SGIDRHLFCLYVVSKYLAVESPFLKEVLSE YVVSKYLAVESPFLKEVLSEPWRLSTSQTP K Y L L K E 1 0 0 0 0 0 1 0 0 0 2 1 0 1 1 1 0 0 1 1 0 0 10 0 1165.6383 P50416 P50416 666 675 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 2 0.038921 81.548 By MS/MS 1 0 1 1 107250 107250 0 16185 946 17133 41188 29050 29050 1 5239.9 0 YLCDEQK VDVAVLKARAKLLQKYLCDEQKELQALYAL ARAKLLQKYLCDEQKELQALYALQALVVTL K Y L Q K E 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 954.41168 Q04637 Q04637 1514 1520 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 2 0.018407 130.77 By MS/MS 1.5 0.5 1 1 2 3323300 3323300 0 16186 1264 17134 41189;41190 29051 29051 1 165140 0 YLCLLASDAEVPEPCLPR RVSGQVQALQNHYRKYLCLLASDAEVPEPC LLASDAEVPEPCLPRQYWEELGAPEALREQ K Y L P R Q 2 1 0 1 2 0 2 0 0 0 4 0 0 0 3 1 0 0 1 1 0 0 18 0 2102.0176 O00411 O00411 533 550 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 0.00015253 129.76 By MS/MS 3.5 0.5 1 1 2 434660 434660 0 16187 92 17135 41191;41192 29052 29052 1 11462 0 YLDGLDVCR LDIPQERGLSSLDRKYLDGLDVCRFPLLDA SSLDRKYLDGLDVCRFPLLDALRPLPLDWM K Y L C R F 0 1 0 2 1 0 0 1 0 0 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1109.5175 P38435 P38435 92 100 GGCX Vitamin K-dependent gamma-carboxylase yes yes 2 0.0090446 112.84 By MS/MS 1 0 1 1 0 0 0 16188 818 17136 41193 29053 29053 1 0 0 YLDGLTAER NLEPIFQGYIDSLKRYLDGLTAERTSQNSE IDSLKRYLDGLTAERTSQNSELNNMQDLVE R Y L E R T 1 1 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 9 0 1036.5189 CON__P35908v2;CON__P35908;P35908 CON__P35908v2 239 247 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 7.4942E-05 172.25 By MS/MS By MS/MS 5 2.6 2 2 3 3 2 3 2 1 2 1 7 14 26039000 15683000 10356000 + 16189 52 17137 41194;41195;41196;41197;41198;41199;41200;41201;41202;41203;41204;41205;41206;41207;41208;41209;41210;41211;41212;41213;41214 29054;29055;29056;29057;29058;29059;29060;29061;29062;29063;29064;29065;29066;29067 29056 14 3857500 31389000 YLDPEYIDR ERVKILYKKIEDLIKYLDPEYIDRIAIPDA IEDLIKYLDPEYIDRIAIPDASKLQFILAE K Y L D R I 0 1 0 2 0 0 1 0 0 1 1 0 0 0 1 0 0 0 2 0 0 0 9 0 1182.5557 O75935 O75935 67 75 DCTN3 Dynactin subunit 3 yes yes 2 0.0050027 115.71 By MS/MS 9 0 1 1 1406500 1406500 0 16190 338 17138 41215 29068 29068 1 807200 0 YLDSIPPGQYMDSSLVK RLYLIFEFLSMDLKKYLDSIPPGQYMDSSL DSIPPGQYMDSSLVKSYLYQILQGIVFCHS K Y L V K S 0 0 0 2 0 1 0 1 0 1 2 1 1 0 2 3 0 0 2 1 0 0 17 0 1911.9288 P06493 P06493 90 106 CDK1 Cyclin-dependent kinase 1 yes yes 2 0.047122 61.235 By MS/MS 8 0 1 1 887160 887160 0 16191 477 17139 41216 29069 29069 1 58526 0 YLEATGQLPVK YQPCLPSTQEDVINKYLEATGQLPVKKGKA VINKYLEATGQLPVKKGKAKN_________ K Y L V K K 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 0 1 0 1 1 0 0 11 0 1217.6656 Q96RP9 Q96RP9 735 745 GFM1 Elongation factor G, mitochondrial yes yes 2 0.00097432 133.99 By MS/MS 7 2.16 1 1 1 1 1 1 6 3972300 3972300 0 16192 2247 17140 41217;41218;41219;41220;41221;41222 29070;29071 29070 2 353290 0 YLEATGQLPVKK YQPCLPSTQEDVINKYLEATGQLPVKKGKA INKYLEATGQLPVKKGKAKN__________ K Y L K K G 1 0 0 0 0 1 1 1 0 0 2 2 0 0 1 0 1 0 1 1 0 0 12 1 1345.7606 Q96RP9 Q96RP9 735 746 GFM1 Elongation factor G, mitochondrial yes yes 2;3 1.7531E-06 182.16 By MS/MS 5.5 0.5 2 2 4 7090700 7090700 0 16193 2247 17141 41223;41224;41225;41226 29072;29073 29073 2 202360 0 YLECSALQQDGVK PQQGQALAKQIHAVRYLECSALQQDGVKEV VRYLECSALQQDGVKEVFAEAVRAVLNPTP R Y L V K E 1 0 0 1 1 2 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 13 0 1509.7133 P84095 P84095 154 166 RHOG Rho-related GTP-binding protein RhoG yes yes 2 3.0748E-13 214.04 By MS/MS 9 0 1 1 559360 559360 0 16194 1217 17142 41227 29074 29074 1 321020 0 YLECSALTQR YPQGLAMAREIGSVKYLECSALTQRGLKTV IGSVKYLECSALTQRGLKTVFDEAIRAVLC K Y L Q R G 1 1 0 0 1 1 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 10 0 1239.5918 P60763;P15153;P63000 P60763 154 163 RAC3;RAC2;RAC1 Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 1 no no 2 0.003576 112.11 By MS/MS 9 0 1 1 1983900 1983900 0 16195 1073;1166 17143 41228 29075 29075 1 1138500 0 YLEEKGTTEEVCR KDEAQVCAIIERVQRYLEEKGTTEEVCRIY QRYLEEKGTTEEVCRIYLLRILHTYYKFDY R Y L C R I 0 1 0 0 1 0 4 1 0 0 1 1 0 0 0 0 2 0 1 1 0 0 13 1 1612.7403 Q99613;B5ME19 Q99613 489 501 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 1.1547E-24 245.13 By MS/MS 4.71 1.03 1 2 2 2 7 10708000 10708000 0 16196 2275 17144 41229;41230;41231;41232;41233;41234;41235 29076;29077 29077 2 294590 0 YLEKEEK VDQCMNRSIALTQARYLEKEEKCLPPPSIR SIALTQARYLEKEEKCLPPPSIRVVVTVEQ R Y L E K C 0 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 7 1 937.47566 O15269 O15269 431 437 SPTLC1 Serine palmitoyltransferase 1 yes yes 2;3 0.0084871 176.41 By MS/MS By matching 6 0 3 2 1 7850400 7838900 11492 16197 165 17145 41236;41237;41238 29078;29079 29079 2 61128 35247 YLEKGFEDEVKK QAFAQVFNKLIRRYKYLEKGFEDEVKKLLL RYKYLEKGFEDEVKKLLLFLKGFSESERNK K Y L K K L 0 0 0 1 0 0 3 1 0 0 1 3 0 1 0 0 0 0 1 1 0 0 12 2 1483.7559 Q7L1Q6 Q7L1Q6 123 134 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 3 0.0044327 100.93 By MS/MS 7 0 1 1 1216800 1216800 0 16198 1762 17146 41239 29080 29080 1 21745 0 YLENGKETLQR LRAYLEGTCVEWLRRYLENGKETLQRAEPP WLRRYLENGKETLQRAEPPKTHVTHHPLSD R Y L Q R A 0 1 1 0 0 1 2 1 0 0 2 1 0 0 0 0 1 0 1 0 0 0 11 1 1349.6939 P04439;P30511;P10321;P01893 P10321 195 205 HLA-A;HLA-F;HLA-C;HLA-H HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, alpha chain F;HLA class I histocompatibility antigen, Cw-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H no no 2;3 0.00078334 160.91 By MS/MS 7.33 0.471 2 1 3 6637100 6637100 0 16199 536;453 17147 41240;41241;41242 29081;29082;29083 29083 3 127610 0 YLESEEYQER LSSVPISPYKDEPWKYLESEEYQERYGSRP DEPWKYLESEEYQERYGSRPVWADYRRNHK K Y L E R Y 0 1 0 0 0 1 4 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 10 0 1344.5834 Q9Y676 Q9Y676 58 67 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 2 1.2044E-10 205.09 By MS/MS By MS/MS 8 0 2 1 1 9143200 9091800 51430 16200 2995 17148 41243;41244 29084;29085 29085 2 599780 438760 YLEVEPVSR MVASFSILGMLVGLRYLEVEPVSRQKKRN_ MLVGLRYLEVEPVSRQKKRN__________ R Y L S R Q 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 9 0 1090.5659 Q9UKR5 Q9UKR5 127 135 C14orf1 Probable ergosterol biosynthetic protein 28 yes yes 2 0.0087323 107.57 By MS/MS 10 0 1 1 750860 750860 0 16201 2815 17149 41245 29086 29086 1 798080 0 YLEVSEPQDIECCGALEYYDK EVKEEMDFPQLMKMRYLEVSEPQDIECCGA PQDIECCGALEYYDKAFDRITTRSEKPLRS R Y L D K A 1 0 0 2 2 1 4 1 0 1 2 1 0 0 1 1 0 0 3 1 0 0 21 0 2580.1036 O15371 O15371 184 204 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 2 8.433E-06 133.45 By MS/MS 6 0 1 1 6226500 6226500 0 16202 172 17150 41246 29087 29087 1 48555 0 YLEYLEDGK LGIIVRMKFLLLQQKYLEYLEDGKVLEALQ LLLQQKYLEYLEDGKVLEALQVLRCELTPL K Y L G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 9 0 1128.5339 Q9H7D7 Q9H7D7 220 228 WDR26 WD repeat-containing protein 26 yes yes 2 0.047489 89.698 By MS/MS 5 0 1 1 0 0 0 16203 2515 17151 41247 29088 29088 1 0 0 YLGDLSGGQVLKK GRTEPELLVAHAYTRYLGDLSGGQVLKKIA TRYLGDLSGGQVLKKIAQKALDLPSSGEGL R Y L K K I 0 0 0 1 0 1 0 3 0 0 3 2 0 0 0 1 0 0 1 1 0 0 13 1 1376.7664 P09601 P09601 137 149 HMOX1 Heme oxygenase 1 yes yes 2 0.00039211 155 By MS/MS 8 0 1 1 1196200 1196200 0 16204 517 17152 41248 29089 29089 1 78913 0 YLGFGTPSNLGK FNGLDRIISRRKNEKYLGFGTPSNLGKGRR NEKYLGFGTPSNLGKGRRAAAAADLANRSG K Y L G K G 0 0 1 0 0 0 0 3 0 0 2 1 0 1 1 1 1 0 1 0 0 0 12 0 1252.6452 O76031 O76031 438 449 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 2 0.00017115 154.01 By MS/MS 7 1.41 1 1 1 1 1 5 21402000 21402000 0 16205 344 17153 41249;41250;41251;41252;41253 29090;29091 29091 2 899310 0 YLGGSMDLSTFDFR SPSGKKFRSKPQLARYLGGSMDLSTFDFRT RYLGGSMDLSTFDFRTGKMLMSKMNKSRQR R Y L F R T 0 1 0 2 0 0 0 2 0 0 2 0 1 2 0 2 1 0 1 0 0 0 14 0 1607.729 O95983 O95983 52 65 MBD3 Methyl-CpG-binding domain protein 3 yes yes 2 1.1167E-05 163.12 By MS/MS 8 0 1 1 451140 451140 0 16206 416 17154 41254 29092 29092 219 1 29762 0 YLGLLENLR QPGRFDEVLIRHQVKYLGLLENLRVRRAGF IRHQVKYLGLLENLRVRRAGFAYRRKYEAF K Y L L R V 0 1 1 0 0 0 1 1 0 0 4 0 0 0 0 0 0 0 1 0 0 0 9 0 1089.6182 O00159 O00159 648 656 MYO1C Unconventional myosin-Ic yes yes 2 0.0011891 138.54 By MS/MS 4 0 1 1 1428700 1428700 0 16207 72 17155 41255 29093 29093 1 39001 0 YLGLLENVR AAHIFNEALVCHQIRYLGLLENVRVRRAGY VCHQIRYLGLLENVRVRRAGYAFRQAYEPC R Y L V R V 0 1 1 0 0 0 1 1 0 0 3 0 0 0 0 0 0 0 1 1 0 0 9 0 1075.6026 O43795;Q9UBC5 O43795 618 626 MYO1B;MYO1A Unconventional myosin-Ib;Unconventional myosin-Ia yes no 2 0.0059614 127.56 By MS/MS 4 0 1 1 2120200 2120200 0 16208 223 17156 41256 29094 29094 1 57878 0 YLGYANEVGEAFR PRGAERDLYRDTWVRYLGYANEVGEAFRSL VRYLGYANEVGEAFRSLVPAAVVWLSYGVA R Y L F R S 2 1 1 0 0 0 2 2 0 0 1 0 0 1 0 0 0 0 2 1 0 0 13 0 1487.7045 Q9UDX5 Q9UDX5 21 33 MTFP1 Mitochondrial fission process protein 1 yes yes 2 1.2961E-11 224.66 By MS/MS 9.5 0.5 1 1 2 5853700 5853700 0 16209 2763 17157 41257;41258 29095 29095 1 3395600 0 YLGYLEQLLR VEQKHIQKEDVPSERYLGYLEQLLRLKKYK VPSERYLGYLEQLLRLKKYKVPQLEIVPNS R Y L L R L 0 1 0 0 0 1 1 1 0 0 4 0 0 0 0 0 0 0 2 0 0 0 10 0 1266.6972 CON__P02662 CON__P02662 91 100 yes yes 2 0.00088136 128.36 By MS/MS 6 0 1 1 2034600 2034600 0 + 16210 37 17158 41259 29096 29096 1 15866 0 YLHDESGLNRR CFKTIISYIDEQFERYLHDESGLNRRHIID QFERYLHDESGLNRRHIIDNRVHCCFYFIS R Y L R R H 0 2 1 1 0 0 1 1 1 0 2 0 0 0 0 1 0 0 1 0 0 0 11 1 1358.6691 Q15019 Q15019 129 139 SEPT2 Septin-2 yes yes 4 0.047004 51.276 By MS/MS 7 0 1 1 1586000 1586000 0 16211 1462 17159 41260 29097 29097 1 28341 0 YLHENLPIPQR KDHVVSDFSEHGSLKYLHENLPIPQRNTN_ GSLKYLHENLPIPQRNTN____________ K Y L Q R N 0 1 1 0 0 1 1 0 1 1 2 0 0 0 2 0 0 0 1 0 0 0 11 0 1378.7357 P54886 P54886 782 792 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 2 0.0015186 140.17 By MS/MS 5.5 0.5 1 1 2 4347200 4347200 0 16212 1019 17160 41261;41262 29098;29099 29099 2 78164 0 YLIANATNPESK ELRSICTTVLELLDKYLIANATNPESKVFY LDKYLIANATNPESKVFYLKMKGDYFRYLA K Y L S K V 2 0 2 0 0 0 1 0 0 1 1 1 0 0 1 1 1 0 1 0 0 0 12 0 1319.6721 P27348 P27348 104 115 YWHAQ 14-3-3 protein theta yes yes 2 5.6202E-05 164.65 By MS/MS 8 0 1 1 1471800 1471800 0 16213 703 17161 41263 29100 29100 1 97093 0 YLIGSGDNPTIVQEGCR GEEDTFSDLIWSNPRYLIGSGDNPTIVQEG IGSGDNPTIVQEGCRYNVMHVAAKENQASI R Y L C R Y 0 1 1 1 1 1 1 3 0 2 1 0 0 0 1 1 1 0 1 1 0 0 17 0 1877.8942 Q86XL3 Q86XL3 335 351 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 1.6387E-18 204.18 By MS/MS 4 0.816 1 1 1 3 4205500 4205500 0 16214 1841 17162 41264;41265;41266 29101 29101 1 122420 0 YLILDEAQNIK LVLQDHQAFRRKNWRYLILDEAQNIKNFKS KNWRYLILDEAQNIKNFKSQRWQSLLNFNS R Y L I K N 1 0 1 1 0 1 1 0 0 2 2 1 0 0 0 0 0 0 1 0 0 0 11 0 1318.7133 Q6ZRS2 Q6ZRS2 742 752 SRCAP Helicase SRCAP yes yes 2 0.0092788 99.013 By MS/MS 1 0 1 1 216860 216860 0 16215 1743 17163 41267 29102 29102 1 10595 0 YLINGVNANNTR EITVTRQVVIGGRNKYLINGVNANNTRVQD RNKYLINGVNANNTRVQDLFCSVGLNVNNP K Y L T R V 1 1 4 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 1 1 0 0 12 0 1347.6895 O95347 O95347 115 126 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.0049137 126.03 By MS/MS 3 0 1 1 0 0 0 16216 385 17164 41268 29103 29103 1 0 0 YLIQDSSILQK NEAKEVRAAGLRALRYLIQDSSILQKVLKL RALRYLIQDSSILQKVLKLKVDYLIARCID R Y L Q K V 0 0 0 1 0 2 0 0 0 2 2 1 0 0 0 2 0 0 1 0 0 0 11 0 1306.7133 Q6R327 Q6R327 109 119 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.00052054 141.91 By MS/MS 3 0.816 1 1 1 3 417440 417440 0 16217 1722 17165 41269;41270;41271 29104 29104 1 15247 0 YLKDHEK DVNKDGKLDFEEFMKYLKDHEKKMKLAFKS LDFEEFMKYLKDHEKKMKLAFKSLDKNNDG K Y L E K K 0 0 0 1 0 0 1 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 7 1 931.47633 Q6NUK1 Q6NUK1 83 89 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2;3 0.011719 172.14 By MS/MS 7 0 2 2 1369600 1369600 0 16218 1690 17166 41272;41273 29105;29106 29106 2 24476 0 YLKDHEKK DVNKDGKLDFEEFMKYLKDHEKKMKLAFKS DFEEFMKYLKDHEKKMKLAFKSLDKNNDGK K Y L K K M 0 0 0 1 0 0 1 0 1 0 1 3 0 0 0 0 0 0 1 0 0 0 8 2 1059.5713 Q6NUK1 Q6NUK1 83 90 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes yes 2 0.0089668 171.53 By MS/MS 7 0 1 1 867480 867480 0 16219 1690 17167 41274 29107 29107 1 15502 0 YLLDSCAPLLR FYMKNILMSKVKPPKYLLDSCAPLLRYLSH KPPKYLLDSCAPLLRYLSHSEFKDLILPTI K Y L L R Y 1 1 0 1 1 0 0 0 0 0 4 0 0 0 1 1 0 0 1 0 0 0 11 0 1319.6908 Q92616 Q92616 241 251 GCN1L1 Translational activator GCN1 yes yes 2 0.00064539 138.4 By MS/MS 2.5 1.12 1 1 1 1 4 2550500 2550500 0 16220 2068 17168 41275;41276;41277;41278 29108;29109;29110;29111 29110 4 95271 0 YLLETSGNLDGLEYK TVATNSREQKKILAKYLLETSGNLDGLEYK YLLETSGNLDGLEYKLHDFGYRGVSSQETA K Y L Y K L 0 0 1 1 0 0 2 2 0 0 4 1 0 0 0 1 1 0 2 0 0 0 15 0 1713.8461 P43490 P43490 175 189 NAMPT Nicotinamide phosphoribosyltransferase yes yes 2 4.8067E-11 160.22 By MS/MS 6 0 1 1 4527100 4527100 0 16221 866 17169 41279 29112 29112 0 35302 0 YLLGVQPAWGSAEAVDIDR GVGVEHEHLVDCARKYLLGVQPAWGSAEAV VQPAWGSAEAVDIDRSVAQYTGGIAKLERD K Y L D R S 3 1 0 2 0 1 1 2 0 1 2 0 0 0 1 1 0 1 1 2 0 0 19 0 2059.0375 Q10713 Q10713 270 288 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 2 2.1201E-07 146.27 By MS/MS 6 0 1 1 3012300 3012300 0 16222 1301 17170 41280 29113;29114 29113 2 23490 0 YLLLLAAGDPR KFASTVFPSDHIPSRYLLLLAAGDPREEVH IPSRYLLLLAAGDPREEVHGEAQRVLRCLP R Y L P R E 2 1 0 1 0 0 0 1 0 0 4 0 0 0 1 0 0 0 1 0 0 0 11 0 1200.6867 Q5VYK3 Q5VYK3 517 527 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.00057102 163.32 By MS/MS 3 0 1 1 1214700 1214700 0 16223 1657 17171 41281 29115 29115 1 31709 0 YLLMSIDQR EEHLEKHRKDKAHKRYLLMSIDQRKKMLKN DKAHKRYLLMSIDQRKKMLKNLRNTNYDVF R Y L Q R K 0 1 0 1 0 1 0 0 0 1 2 0 1 0 0 1 0 0 1 0 0 0 9 0 1137.5852 P82914 P82914 155 163 MRPS15 28S ribosomal protein S15, mitochondrial yes yes 2 0.00070257 153.08 By MS/MS 8.75 0.433 1 3 4 1826900 1826900 0 16224 1207 17172;17173 41282;41283;41284;41285 29116;29117;29118;29119 29117 992 4 1015300 0 YLLQEQLK LGREVEEKIKQTHRKYLLQEQLKIIKKELG IKQTHRKYLLQEQLKIIKKELGLEKDDKDA K Y L L K I 0 0 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 8 0 1033.5808 P36776 P36776 394 401 LONP1 Lon protease homolog, mitochondrial yes yes 2 0.0030754 149.4 By MS/MS 4.5 0.5 1 1 2 3881900 3881900 0 16225 809 17174 41286;41287 29120;29121 29121 2 108600 0 YLLQPLGDFSR VLTLAGVARIFNTRRYLLQPLGDFSRAWDV NTRRYLLQPLGDFSRAWDVLLDHIQSAALS R Y L S R A 0 1 0 1 0 1 0 1 0 0 3 0 0 1 1 1 0 0 1 0 0 0 11 0 1307.6874 Q7Z3U7 Q7Z3U7 1131 1141 MON2 Protein MON2 homolog yes yes 2 0.0028547 140.17 By MS/MS 4 0.816 1 1 1 3 723890 723890 0 16226 1786 17175 41288;41289;41290 29122 29122 1 19945 0 YLLYGEK LHYLKNTSFAYPAIRYLLYGEKGTGKTLSL SFAYPAIRYLLYGEKGTGKTLSLCHVIHFC R Y L E K G 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 2 0 0 0 7 0 884.46437 P51398 P51398 124 130 DAP3 28S ribosomal protein S29, mitochondrial yes yes 2 0.031349 114.02 By MS/MS By matching 7.33 0.471 2 1 2 1 12455000 12422000 33555 16227 963 17176 41291;41292;41293 29123 29123 1 239720 137750 YLNEAAGVAAEEAR VFVDLKWFESKVGNKYLNEAAGVAAEEARN KYLNEAAGVAAEEARNYKEKKKLKGQENSL K Y L A R N 5 1 1 0 0 0 3 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 14 0 1462.7052 Q8IZH2 Q8IZH2 369 382 XRN1 5-3 exoribonuclease 1 yes yes 2 6.7987E-05 152.16 By MS/MS 3 0 1 1 806810 806810 0 16228 1887 17177 41294 29124 29124 1 21062 0 YLNIFGESQPNPK KNGEFFMSPNDFVTRYLNIFGESQPNPKTV TRYLNIFGESQPNPKTVELLSGVVDQTKDG R Y L P K T 0 0 2 0 0 1 1 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 13 0 1505.7514 Q9UJS0 Q9UJS0 44 56 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 2 7.3297E-46 275.57 By MS/MS By MS/MS 5.45 2.74 1 1 1 1 2 1 1 1 1 1 10 1 60642000 60608000 34170 16229 2798 17178 41295;41296;41297;41298;41299;41300;41301;41302;41303;41304;41305 29125;29126;29127;29128;29129;29130;29131;29132;29133 29128 9 2591900 101110 YLNQTSR MDQDSLSSSLKTCYKYLNQTSRSFAAVIQA SSLKTCYKYLNQTSRSFAAVIQALDGEMRN K Y L S R S 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 7 0 880.44028 P37268 P37268 46 52 FDFT1 Squalene synthase yes yes 2 0.042442 106.36 By MS/MS 7 0 1 1 6048900 6048900 0 16230 814 17179 41306 29134 29134 1 108100 0 YLNTQFIK EEYSKGADYMDCLYRYLNTQFIKKNKLTEA YMDCLYRYLNTQFIKKNKLTEADLQYGYGG R Y L I K K 0 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 8 0 1025.5546 Q13617 Q13617 107 114 CUL2 Cullin-2 yes yes 2 0.031446 98.629 By MS/MS 5 0 1 1 445380 445380 0 16231 1388 17180 41307 29135 29135 1 18307 0 YLQSNSNNWR EKTAISSKRRAQMTKYLQSNSNNWRWFDDR AQMTKYLQSNSNNWRWFDDRSGRWCSYSAS K Y L W R W 0 1 3 0 0 1 0 0 0 0 1 0 0 0 0 2 0 1 1 0 0 0 10 0 1280.5898 Q7Z6Z7 Q7Z6Z7 1609 1618 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00039842 148.94 By MS/MS 1.5 0.5 1 1 2 309200 309200 0 16232 1803 17181 41308;41309 29136;29137 29136 2 15211 0 YLQTLTTIAAEK ASMVITESPAALQLRYLQTLTTIAAEKNST QLRYLQTLTTIAAEKNSTIVFPLPIDMLQG R Y L E K N 2 0 0 0 0 1 1 0 0 1 2 1 0 0 0 0 3 0 1 0 0 0 12 0 1350.7395 P27105 P27105 252 263 STOM Erythrocyte band 7 integral membrane protein yes yes 2 5.4052E-06 175.74 By MS/MS 8 0 1 1 778440 778440 0 16233 701 17182 41310 29138 29138 1 51354 0 YLQWEIGNK AKRLNLATECLPLDKYLQWEIGNKNLTLDQ CLPLDKYLQWEIGNKNLTLDQMIRILLCLK K Y L N K N 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 1 1 0 0 0 9 0 1149.5819 Q7L0Y3 Q7L0Y3 341 349 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 2 0.0026132 123.21 By MS/MS 7 0 1 1 15667000 15667000 0 16234 1761 17183 41311 29139 29139 1 279970 0 YLRHEDETR HKEPDCLESVKDLIRYLRHEDETRDVRQQL VKDLIRYLRHEDETRDVRQQLGAAQILQSD R Y L T R D 0 2 0 1 0 0 2 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 9 1 1217.5789 Q9UNS1 Q9UNS1 41 49 TIMELESS Protein timeless homolog yes yes 3 0.0096887 96.034 By MS/MS 3 0 1 1 230900 230900 0 16235 2846 17184 41312 29140 29140 1 6027.6 0 YLSEVASGDNK ESKVFYLKMKGDYFRYLSEVASGDNKQTTV DYFRYLSEVASGDNKQTTVSNSQQAYQEAF R Y L N K Q 1 0 1 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 0 1181.5564 P31946 P31946 130 140 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 4.5919E-07 187.5 By MS/MS By matching 5.14 2.36 1 1 1 2 1 1 3 4 6545400 6207300 338100 16236 760 17185 41313;41314;41315;41316;41317;41318;41319 29141 29141 1 410110 387820 YLSQLKDAHR VLSQHLGKPPEVTNRYLSQLKDAHRSHPFI EVTNRYLSQLKDAHRSHPFIKEYQAKENDF R Y L H R S 1 1 0 1 0 1 0 0 1 0 2 1 0 0 0 1 0 0 1 0 0 0 10 1 1229.6517 O14579 O14579 273 282 COPE Coatomer subunit epsilon yes yes 3 0.0021705 104.05 By MS/MS 8 0 1 1 0 0 0 16237 115 17186 41320 29142 29142 1 0 0 YLSTEAGQR PPAQVCLKGKLHIFKYLSTEAGQRGSALGD KLHIFKYLSTEAGQRGSALGDLAPSRPPSF K Y L Q R G 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 9 0 1023.4985 O75427 O75427 257 265 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes yes 2 0.0045956 120.87 By MS/MS 5 0 1 1 0 0 0 16238 308 17187 41321 29143 29143 1 0 0 YLTDFEPIQCLGR DSSWNDIKNSGYISRYLTDFEPIQCLGRGG SRYLTDFEPIQCLGRGGFGVVFEAKNKVDD R Y L G R G 0 1 0 1 1 1 1 1 0 1 2 0 0 1 1 0 1 0 1 0 0 0 13 0 1610.7763 Q9NZJ5 Q9NZJ5 589 601 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes yes 2 1.5492E-11 195.27 By MS/MS 3.5 0.5 1 1 2 363440 363440 0 16239 2712 17188 41322;41323 29144 29144 1 9578.1 0 YLTESYGTGQDIDDR ESGAGKTENTKFVLRYLTESYGTGQDIDDR YLTESYGTGQDIDDRIVEANPLLEAFGNAK R Y L D R I 0 1 0 3 0 1 1 2 0 1 1 0 0 0 0 1 2 0 2 0 0 0 15 0 1731.7588 Q9UM54 Q9UM54 167 181 MYO6 Unconventional myosin-VI yes yes 2 2.9315E-38 258.78 By MS/MS 3 0 1 1 917860 917860 0 16240 2833 17189 41324 29145 29145 1 23961 0 YLTLDGFDAMFR GLLEINRMTHKLLSRYLTLDGFDAMFREAN LSRYLTLDGFDAMFREANHNVSAPYGRITL R Y L F R E 1 1 0 2 0 0 0 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 12 0 1447.6806 Q7L576 Q7L576 815 826 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 0.0025743 112.3 By MS/MS 3 0 1 1 99042 99042 0 16241 1765 17190 41325 29146 29146 1253 1 2585.5 0 YLTTAVITNK QYLNAIQTMCPHILRYLTTAVITNKDVRKR PHILRYLTTAVITNKDVRKRRQVLKDLVKV R Y L N K D 1 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 3 0 1 1 0 0 10 0 1122.6285 P60228 P60228 256 265 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 2 5.0471E-06 176.38 By MS/MS By matching 6.8 0.748 2 2 1 3 2 59837000 59690000 147580 16242 1065 17191 41326;41327;41328;41329;41330 29147;29148;29149 29148 3 608150 502980 YLTTAVITNKDVR QYLNAIQTMCPHILRYLTTAVITNKDVRKR LRYLTTAVITNKDVRKRRQVLKDLVKVIQQ R Y L V R K 1 1 1 1 0 0 0 0 0 1 1 1 0 0 0 0 3 0 1 2 0 0 13 1 1492.8249 P60228 P60228 256 268 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 3 0.041624 67.456 By MS/MS 6.5 0.5 1 1 2 3073400 3073400 0 16243 1065 17192 41331;41332 29150 29150 1 31585 0 YLTVAAIFR DSKNMMAACDPRHGRYLTVAAIFRGRMSMK DPRHGRYLTVAAIFRGRMSMKEVDEQMLNV R Y L F R G 2 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 9 0 1052.6019 Q13885;Q9BVA1 Q13885 310 318 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain no no 2 0.00094432 166.68 By MS/MS 6.5 0.5 1 1 2 7082100 7082100 0 16244 1400;2375 17193 41333;41334 29151 29151 1 55873 0 YLTVAAVFR DAKNMMAACDPRHGRYLTVAAVFRGRMSMK DPRHGRYLTVAAVFRGRMSMKEVDEQMLNV R Y L F R G 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 9 0 1038.5862 P07437;P68371;P04350 P68371 310 318 TUBB;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 2 5.5626E-08 226.68 By MS/MS By MS/MS 6.38 1.65 1 4 1 1 1 7 1 159910000 159650000 266660 16245 1187;490;451 17194 41335;41336;41337;41338;41339;41340;41341;41342 29152;29153;29154;29155;29156;29157;29158;29159 29154 8 2085700 817820 YLTVATVFR DAKNMMAACDPRHGRYLTVATVFRGRMSMK DPRHGRYLTVATVFRGRMSMKEVDEQMLAI R Y L F R G 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 2 0 1 2 0 0 9 0 1068.5968 Q13509;Q9BUF5 Q13509 310 318 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 2 2.6318E-06 186.3 By MS/MS 6.5 0.5 1 1 2 5033800 5033800 0 16246 1377;2363 17195 41343;41344 29160;29161 29161 2 45398 0 YLVIDEAHR MLIKEKSVFKKFNWRYLVIDEAHRIKNEKS KKFNWRYLVIDEAHRIKNEKSKLSEIVREF R Y L H R I 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 9 0 1114.5771 O60264;P28370 O60264 304 312 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 no no 2 0.046101 82.452 By MS/MS 3 0 1 1 1846700 1846700 0 16247 240;720 17196 41345 29162 29162 1 48209 0 YLVLDEADR VDMMERGKIGLDFCKYLVLDEADRMLDMGF GLDFCKYLVLDEADRMLDMGFEPQIRRIVE K Y L D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1092.5451 O00571;O15523;Q9NQI0 O00571 343 351 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 0.004042 117.81 By MS/MS By MS/MS 3.2 1.6 1 1 1 2 4 1 14240000 14173000 66718 16248 105 17197 41346;41347;41348;41349;41350 29163;29164 29164 2 582790 197420 YLVNPEGQVVK LVDSSKKEPRWNFWKYLVNPEGQVVKFWKP NFWKYLVNPEGQVVKFWKPEEPIEVIRPDI K Y L V K F 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 0 0 0 1 3 0 0 11 0 1244.6765 Q8TED1 Q8TED1 169 179 GPX8 Probable glutathione peroxidase 8 yes yes 2 0.0011893 131.12 By MS/MS 9.5 0.5 1 1 2 5830400 5830400 0 16249 2001 17198 41351;41352 29165 29165 1 3443100 0 YLVQDTDEFILPTGANK TGMNPLSPYLNVDPRYLVQDTDEFILPTGA VQDTDEFILPTGANKTRGRFELAFFTIGGC R Y L N K T 1 0 1 2 0 1 1 1 0 1 2 1 0 1 1 0 2 0 1 1 0 0 17 0 1922.9626 O14925;Q5SRD1 O14925 52 68 TIMM23;TIMM23B Mitochondrial import inner membrane translocase subunit Tim23;Putative mitochondrial import inner membrane translocase subunit Tim23B yes no 2;3 6.6107E-11 172.58 By MS/MS By matching 7.33 3.16 1 1 1 5 1 8 1 26831000 26741000 90697 16250 133 17199 41353;41354;41355;41356;41357;41358;41359;41360;41361 29166;29167;29168;29169;29170;29171;29172;29173;29174 29174 9 15413000 977460 YLVQDTDEFILPTGANKTR TGMNPLSPYLNVDPRYLVQDTDEFILPTGA DTDEFILPTGANKTRGRFELAFFTIGGCCM R Y L T R G 1 1 1 2 0 1 1 1 0 1 2 1 0 1 1 0 3 0 1 1 0 0 19 1 2180.1113 O14925 O14925 52 70 TIMM23 Mitochondrial import inner membrane translocase subunit Tim23 yes yes 3 0.0089758 69.111 By MS/MS 9.5 0.5 1 1 2 3612900 3612900 0 16251 133 17200 41362;41363 29175 29175 1 2140600 0 YLYSSEDYIK ILLWDVDGGLTQIDKYLYSSEDYIKSGALL TQIDKYLYSSEDYIKSGALLACGIVNSGVR K Y L I K S 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 2 0 0 3 0 0 0 10 0 1279.5972 Q13200 Q13200 432 441 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 1.9049E-10 199.68 By MS/MS 5 0.816 1 1 1 3 7248800 7248800 0 16252 1347 17201 41364;41365;41366 29176 29176 1 198860 0 YLYTLVITDK KKNKDNVKFKVRCSRYLYTLVITDKEKAEK VRCSRYLYTLVITDKEKAEKLKQSLPPGLA R Y L D K E 0 0 0 1 0 0 0 0 0 1 2 1 0 0 0 0 2 0 2 1 0 0 10 0 1227.6751 P63173 P63173 41 50 RPL38 60S ribosomal protein L38 yes yes 2 0.00040491 148.69 By MS/MS 10 0 1 1 1326600 1326600 0 16253 1173 17202 41367 29177 29177 1 1410100 0 YLYTLVITDKEK KKNKDNVKFKVRCSRYLYTLVITDKEKAEK CSRYLYTLVITDKEKAEKLKQSLPPGLAVK R Y L E K A 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 2 0 2 1 0 0 12 1 1484.8126 P63173 P63173 41 52 RPL38 60S ribosomal protein L38 yes yes 2;3 9.1012E-11 211.86 By MS/MS 10 0 2 2 1924900 1924900 0 16254 1173 17203 41368;41369 29178;29179 29179 2 2046000 0 YMACCLLYR EPANQMVKCDPRHGKYMACCLLYRGDVVPK DPRHGKYMACCLLYRGDVVPKDVNAAIATI K Y M Y R G 1 1 0 0 2 0 0 0 0 0 2 0 1 0 0 0 0 0 2 0 0 0 9 0 1248.5454 P68363;Q71U36;Q9BQE3;A6NHL2;P68366 P68363 312 320 TUBA1B;TUBA1A;TUBA1C;TUBAL3;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 2 0.00013435 168.38 By MS/MS By MS/MS 6.44 2.45 1 1 3 1 1 1 1 8 1 171770000 171610000 159570 16255 1185;1754;2314;1186;22 17204;17205 41370;41371;41372;41373;41374;41375;41376;41377;41378 29180;29181;29182;29183;29184;29185;29186;29187 29187 8 8 2330100 489390 YMDAWNTVSR LDNSEQKCIAMCMDRYMDAWNTVSRAYNSR MCMDRYMDAWNTVSRAYNSRLQRERANM__ R Y M S R A 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 1 1 1 1 1 0 0 10 0 1241.5499 Q9Y5L4 Q9Y5L4 73 82 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 2 0.00052346 133.75 By MS/MS 10 0 1 1 260950 260950 0 16256 2975 17206 41379 29188 29188 1714 1 277360 0 YMDGHHVK PHGFISYRLFRDATRYMDGHHVKDISCLNR LFRDATRYMDGHHVKDISCLNRDPARVVVV R Y M V K D 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 1 1 0 0 8 0 985.44399 Q3ZCQ8 Q3ZCQ8 225 232 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 2;3 0.025765 96.19 By MS/MS 7.5 0.5 2 2 4 985200 985200 0 16257 1573 17207 41380;41381;41382;41383 29189;29190 29189 1181 2 26890 0 YMSPMEAQEFGILDK KQSLQVIESAMERDRYMSPMEAQEFGILDK YMSPMEAQEFGILDKVLVHPPQDGEDEPTL R Y M D K V 1 0 0 1 0 1 2 1 0 1 1 1 2 1 1 1 0 0 1 0 0 0 15 0 1757.8004 Q16740 Q16740 229 243 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 2 0.031168 83.877 By MS/MS 8 0 1 1 249810 249810 0 16258 1545 17208 41384 29191 29191 1173 0 16480 0 YNACILEYK PKGESKDLLFILTAKYNACILEYKQSGESI FILTAKYNACILEYKQSGESIDIITRAHGN K Y N Y K Q 1 0 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 9 0 1172.5536 Q16531 Q16531 84 92 DDB1 DNA damage-binding protein 1 yes yes 2 0.00092964 143.7 By MS/MS 2.5 1.12 1 1 1 1 4 1579400 1579400 0 16259 1537 17209 41385;41386;41387;41388 29192;29193;29194 29192 3 51570 0 YNADEAR GLRDYQDNKADVILKYNADEARSLKAYGEL NKADVILKYNADEARSLKAYGELPEHAKIN K Y N A R S 2 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 7 0 837.3617 P47813;O14602 P47813 95 101 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 2 0.05115 104.75 By MS/MS 9 0 1 1 0 0 0 16260 116 17210 41389 29195 29195 1 0 0 YNADYDLSAR ISVPHKIITHLRKEKYNADYDLSARQGADT LRKEKYNADYDLSARQGADTLAFMSLLEEK K Y N A R Q 2 1 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 10 0 1186.5255 Q13505 Q13505 228 237 MTX1 Metaxin-1 yes yes 2 0.00021782 178.84 By MS/MS 8 0 1 1 2343300 2343300 0 16261 1376 17211 41390 29196 29196 1 154590 0 YNDPIYVK RPEILKHEMKVFFVKYNDPIYVKLEKLDIM MKVFFVKYNDPIYVKLEKLDIMIRLASQAN K Y N V K L 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 2 1 0 0 8 0 1010.5073 P63010;Q10567 Q10567 328 335 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 2 0.024314 101.43 By MS/MS 4 0 1 1 393600 393600 0 16262 1300;1167 17212 41391 29197 29197 1 10745 0 YNELSYK RVLDYRRKFIEAAQRYNELSYKTIVHESER KFIEAAQRYNELSYKTIVHESERLEALKHA R Y N Y K T 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 2 0 0 0 7 0 915.4338 Q9BT78 Q9BT78 208 214 COPS4 COP9 signalosome complex subunit 4 yes yes 2 0.034542 111.82 By MS/MS 7.5 0.5 1 1 2 2915700 2915700 0 16263 2347 17213 41392;41393 29198 29198 1 57211 0 YNEQHVPGSPFTAR SYLPVLPGDYSILVKYNEQHVPGSPFTARV KYNEQHVPGSPFTARVTGDDSMRMSHLKVG K Y N A R V 1 1 1 0 0 1 1 1 1 0 0 0 0 1 2 1 1 0 1 1 0 0 14 0 1601.7587 P21333 P21333 1938 1951 FLNA Filamin-A yes yes 3 0.00070959 124.81 By MS/MS 3 0.816 1 1 1 3 955880 955880 0 16264 648 17214 41394;41395;41396 29199 29199 1 33078 0 YNFFCQGTR LYMFCELVTGVWEGKYNFFCQGTRTAGESD GVWEGKYNFFCQGTRTAGESDMKIIRVLWW K Y N T R T 0 1 1 0 1 1 0 1 0 0 0 0 0 2 0 0 1 0 1 0 0 0 9 0 1191.5131 Q9NYP7 Q9NYP7 92 100 ELOVL5 Elongation of very long chain fatty acids protein 5 yes yes 2 0.0021422 128.28 By MS/MS 2 0.816 1 1 1 3 914670 914670 0 16265 2697 17215 41397;41398;41399 29200 29200 1 40797 0 YNFFTGCPK GRCQVFEETQIGGERYNFFTGCPKAKTCTF QIGGERYNFFTGCPKAKTCTFILRGGAEQF R Y N P K A 0 0 1 0 1 0 0 1 0 0 0 1 0 2 1 0 1 0 1 0 0 0 9 0 1132.5012 Q99832 Q99832 358 366 CCT7 T-complex protein 1 subunit eta yes yes 2 1.6626E-06 189.82 By MS/MS 4.5 2.29 1 1 1 1 1 1 1 1 8 118660000 118660000 0 16266 2295 17216 41400;41401;41402;41403;41404;41405;41406;41407 29201;29202;29203;29204;29205;29206 29204 6 1056200 0 YNFPNPNPFVEDDMDKNEIASVAYR NHNFSQQCLRMGKERYNFPNPNPFVEDDMD EDDMDKNEIASVAYRYRRWKLGDDIDLIVR R Y N Y R Y 2 1 4 3 0 0 2 0 0 1 0 1 1 2 3 1 0 0 2 2 0 0 25 1 2944.3338 O15371 O15371 335 359 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 3 0.00020555 80.453 By MS/MS 6 0 2 2 7588500 7588500 0 16267 172 17217;17218 41408;41409 29207;29208 29207 104 2 59175 0 YNFPVEVEVPMER KNLLIFENLIDLKRRYNFPVEVEVPMERKK RRYNFPVEVEVPMERKKKYIEIRKEAREAA R Y N E R K 0 1 1 0 0 0 3 0 0 0 0 0 1 1 2 0 0 0 1 3 0 0 13 0 1607.7654 P78527 P78527 1988 2000 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 3.8511E-05 157.68 By MS/MS 1.8 0.748 2 2 1 5 2422700 2422700 0 16268 1197 17219;17220 41410;41411;41412;41413;41414 29209;29210;29211;29212;29213;29214 29209 982 6 111460 0 YNHLVYSQIPAAVK IVIRQISDLMGLIPKYNHLVYSQIPAAVKL KYNHLVYSQIPAAVKLTYQDAVNLQNYVEE K Y N V K L 2 0 1 0 0 1 0 0 1 1 1 1 0 0 1 1 0 0 2 2 0 0 14 0 1601.8566 O95071 O95071 1805 1818 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 3 0.024302 67.115 By MS/MS 1 0 1 1 0 0 0 16269 364 17221 41415 29215 29215 1 0 0 YNIEKDIAAHIK MQQDSVECATQALEKYNIEKDIAAHIKKEF LEKYNIEKDIAAHIKKEFDKKYNPTWHCIV K Y N I K K 2 0 1 1 0 0 1 0 1 3 0 2 0 0 0 0 0 0 1 0 0 0 12 1 1413.7616 P63167 P63167 32 43 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 3 0.040459 77.387 By MS/MS 10 0 1 1 242610 242610 0 16270 1171 17222 41416 29216 29216 1 257870 0 YNIEVVCEYIVK VAEGAPIIPISAQLKYNIEVVCEYIVKKIP QLKYNIEVVCEYIVKKIPVPPRDFTSEPRL K Y N V K K 0 0 1 0 1 0 2 0 0 2 0 1 0 0 0 0 0 0 2 3 0 0 12 0 1527.7643 P41091;Q2VIR3 P41091 230 241 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 2 0.00064227 137.4 By MS/MS 6 0 1 1 1292100 1292100 0 16271 836 17223 41417 29217 29217 1 10076 0 YNILGTNTIMDK KTTWVTKHAAENPGKYNILGTNTIMDKMMV PGKYNILGTNTIMDKMMVAGFKKQMADTGK K Y N D K M 0 0 2 1 0 0 0 1 0 2 1 1 1 0 0 0 2 0 1 0 0 0 12 0 1381.6912 Q00839 Q00839 525 536 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.00028928 142.19 By MS/MS By matching 4 0 2 1 1 562630 518480 44144 16272 1238 17224 41418;41419 29218 29218 1009 1 14154 92242 YNIMLVR TGGKVADMALHYANKYNIMLVRLNSKWDLR MALHYANKYNIMLVRLNSKWDLRRLCKTVG K Y N V R L 0 1 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 1 1 0 0 7 0 907.49496 P50990 P50990 308 314 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0083859 159.19 By MS/MS 6 0.707 1 2 1 4 22309000 22309000 0 16273 955 17225;17226 41420;41421;41422;41423 29219;29220;29221 29221 711 3 187180 0 YNIPHGPVVGSTR YADLSDTELTTLLRRYNIPHGPVVGSTRRL RRYNIPHGPVVGSTRRLYEKKIFEYETQRR R Y N T R R 0 1 1 0 0 0 0 2 1 1 0 0 0 0 2 1 1 0 1 2 0 0 13 0 1395.7259 P50402 P50402 19 31 EMD Emerin yes yes 2;3 0.012878 81.709 By MS/MS By matching 8 0 4 2 2 11091000 11042000 48463 16274 945 17227 41424;41425;41426;41427 29222;29223 29223 2 728450 413450 YNLGLDLR TMERSARQIMRTAMKYNLGLDLRTAAYVNA IMRTAMKYNLGLDLRTAAYVNAIEKVFKVY K Y N L R T 0 1 1 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 1 0 0 0 8 0 962.51853 P00367;P49448 P00367 528 535 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 0.00039543 186.3 By MS/MS 6 0 1 1 4686100 4686100 0 16275 425 17228 41428 29224 29224 1 36543 0 YNPENLATLER QMRANVGKLLKGIDRYNPENLATLERYVET GIDRYNPENLATLERYVETQAKENAYDLEA R Y N E R Y 1 1 2 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 11 0 1318.6517 Q9UBQ5 Q9UBQ5 21 31 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.00052545 141.71 By MS/MS By MS/MS 9.33 0.471 2 1 2 1 14547000 14547000 0 16276 2755 17229 41429;41430;41431 29225;29226 29226 2 8413000 0 YNRDFESHITSYK NNAKALSTLRQKIRKYNRDFESHITSYKQN RKYNRDFESHITSYKQNPEQSADEDAEKNE K Y N Y K Q 0 1 1 1 0 0 1 0 1 1 0 1 0 1 0 2 1 0 2 0 0 0 13 1 1658.7689 Q99613;B5ME19 Q99613 148 160 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 3 0.0034483 98.582 By MS/MS 4 0 1 1 1277100 1277100 0 16277 2275 17230 41432 29227 29227 1 34863 0 YNVPFLTFINK GVQCQTMTVNRQMKRYNVPFLTFINKLDRM QMKRYNVPFLTFINKLDRMGSNPARALQQM R Y N N K L 0 0 2 0 0 0 0 0 0 1 1 1 0 2 1 0 1 0 1 1 0 0 11 0 1354.7285 Q96RP9 Q96RP9 165 175 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0037846 112.83 By MS/MS 6 0 1 1 657500 657500 0 16278 2247 17231 41433 29228 29228 1 5127.2 0 YNVSTTPYLQSVK VKTPNTETRTSCLIKYNVSTTPYLQSVKKK IKYNVSTTPYLQSVKKKVQFDGTNSAFKEL K Y N V K K 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 2 0 2 2 0 0 13 0 1498.7668 Q8WWK9 Q8WWK9 592 604 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 2.9225E-05 166.11 By MS/MS 5 0 1 1 767900 767900 0 16279 2040 17232 41434 29229 29229 1 31564 0 YNYLKPR RYSALFLGVAYGATRYNYLKPRAEEERRIA GVAYGATRYNYLKPRAEEERRIAAEEKKKQ R Y N P R A 0 1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 7 1 952.51305 P56385 P56385 30 36 ATP5I ATP synthase subunit e, mitochondrial yes yes 3 0.04962 83.614 By MS/MS 10 0 1 1 2659100 2659100 0 16280 1046 17233 41435 29230 29230 1 2826400 0 YPANSIVVVGGCPVCR HHPRVYNIHSRTVTRYPANSIVVVGGCPVC PANSIVVVGGCPVCRVGVLEDCFTFLGIFL R Y P C R V 1 1 1 0 2 0 0 2 0 1 0 0 0 0 2 1 0 0 1 4 0 0 16 0 1746.8545 O95415 O95415 67 82 BRI3 Brain protein I3 yes yes 2 2.5134E-06 196.7 By MS/MS 10 0 1 1 272360 272360 0 16281 392 17234 41436 29231 29231 1 289490 0 YPASTVQILGAEK ARLIAHAGSLTNLAKYPASTVQILGAEKAL AKYPASTVQILGAEKALFRALKTRGNTPKY K Y P E K A 2 0 0 0 0 1 1 1 0 1 1 1 0 0 1 1 1 0 1 1 0 0 13 0 1375.7347 O00567 O00567 321 333 NOP56 Nucleolar protein 56 yes yes 2 4.7324E-05 159.44 By MS/MS 5 0 1 1 675720 675720 0 16282 104 17235 41437 29232 29232 1 27775 0 YPDPLIK KGIPHLVTHDARTIRYPDPLIKVNDTIQID THDARTIRYPDPLIKVNDTIQIDLETGKIT R Y P I K V 0 0 0 1 0 0 0 0 0 1 1 1 0 0 2 0 0 0 1 0 0 0 7 0 844.46945 P62701;Q8TD47 P62701 149 155 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.039719 108.24 By MS/MS By matching 8 0 2 1 1 1002300 949870 52393 16283 1140 17236 41438;41439 29233 29233 1 62663 446980 YPEAQSVASDILR RFKILKAECLAMLGRYPEAQSVASDILRMD GRYPEAQSVASDILRMDSTNADALYVRGLC R Y P L R M 2 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 1 0 0 13 0 1447.7307 Q99615 Q99615 192 204 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 2 3.6405E-05 163.46 By MS/MS 6 0 1 1 6592200 6592200 0 16284 2276 17237 41440 29234;29235 29234 2 51406 0 YPEETLSLMTK EARLKFPRLLQIIERYPEETLSLMTKEISS IIERYPEETLSLMTKEISSVPCWQFISWIS R Y P T K E 0 0 0 0 0 0 2 0 0 0 2 1 1 0 1 1 2 0 1 0 0 0 11 0 1310.6428 P78527 P78527 3475 3485 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 5.2126E-11 208.63 By MS/MS 1.8 0.748 2 2 1 5 1561200 1561200 0 16285 1197 17238;17239 41441;41442;41443;41444;41445 29236;29237;29238 29237 983 3 70802 0 YPENFFLLR QSLETICLLLAYKIKYPENFFLLRGNHECA LAYKIKYPENFFLLRGNHECASINRIYGFY K Y P L R G 0 1 1 0 0 0 1 0 0 0 2 0 0 2 1 0 0 0 1 0 0 0 9 0 1197.6182 P36873;P62136;P62140 P62136 114 122 PPP1CC;PPP1CA;PPP1CB Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit no no 2 0.015745 99.139 By MS/MS 8 0 1 1 297990 297990 0 16286 1114;810;1115 17240 41446 29239 29239 1 19658 0 YPSATNNTPAK PEQYQEAFQKLQNIKYPSATNNTPAKQLLL QNIKYPSATNNTPAKQLLLHICHDLTLAVL K Y P A K Q 2 0 2 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 1 0 0 0 11 0 1162.5619 Q8TEQ6 Q8TEQ6 1188 1198 GEMIN5 Gem-associated protein 5 yes yes 2 0.00050946 142.36 By MS/MS 3 0 1 1 818290 818290 0 16287 2003 17241 41447 29240 29240 1 21362 0 YPVNSVNILK AVLAIKYTDIRGQPRYPVNSVNILKAHGRS RGQPRYPVNSVNILKAHGRSQMESMLISGY R Y P L K A 0 0 2 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 1 2 0 0 10 0 1145.6445 P17987 P17987 190 199 TCP1 T-complex protein 1 subunit alpha yes yes 2 0.00054942 143.03 By MS/MS 5 2.58 1 1 1 1 1 1 1 1 1 9 257300000 257300000 0 16288 619 17242 41448;41449;41450;41451;41452;41453;41454;41455;41456 29241;29242;29243;29244;29245;29246;29247;29248;29249 29244 9 2996600 0 YQAECSQFK ENCNKNKFLDQNLQKYQAECSQFKAKLASL DQNLQKYQAECSQFKAKLASLEELKRQAEL K Y Q F K A 1 0 0 0 1 2 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 9 0 1159.4968 P15924 P15924 1065 1073 DSP Desmoplakin yes yes 2 0.0069427 114.86 By MS/MS 2 0 1 1 0 0 0 16289 603 17243 41457 29250 29250 1 0 0 YQAVQEAVEDR APDFVQRGFDSFLGRYQAVQEAVEDRQQHL FLGRYQAVQEAVEDRQQHLENELKGQPGHA R Y Q D R Q 2 1 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 11 0 1306.6153 P46939 P46939 886 896 UTRN Utrophin yes yes 2 0.00082539 135.99 By MS/MS 1 0 1 1 100230 100230 0 16290 891 17244 41458 29251 29251 1 4896.9 0 YQAVTATLEEK KFAYLGRLAHEVGWKYQAVTATLEEKRKEK VGWKYQAVTATLEEKRKEKAKIHYRKKKQL K Y Q E K R 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 2 0 1 1 0 0 11 0 1251.6347 P40429;Q6NVV1 P40429 149 159 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 2 0.00017006 156.16 By MS/MS 8.5 0.5 1 1 2 1356600 1356600 0 16291 829 17245 41459;41460 29252 29252 1 668940 0 YQDILNEIAK LRTLEQTGHVSSENKYQDILNEIAKDIRNQ SSENKYQDILNEIAKDIRNQRIYRKLRKAE K Y Q A K D 1 0 1 1 0 1 1 0 0 2 1 1 0 0 0 0 0 0 1 0 0 0 10 0 1205.6292 Q13576 Q13576 1393 1402 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.0072955 133.81 By MS/MS 3 0 1 1 0 0 0 16292 1383 17246 41461 29253 29253 1 0 0 YQDILVFR LSLQVEQLLHHRRSRYQDILVFRSKTYGNV LHHRRSRYQDILVFRSKTYGNVLVLDGVIQ R Y Q F R S 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 8 0 1052.5655 P19623 P19623 48 55 SRM Spermidine synthase yes yes 2 0.0072561 128.69 By MS/MS 9 0.816 1 1 1 3 4922300 4922300 0 16293 635 17247 41462;41463;41464 29254;29255 29254 2 405870 0 YQDLGAYSSAR EVEQFTQVAKAYQDRYQDLGAYSSARKCLA YQDRYQDLGAYSSARKCLAKQRQRMLQERK R Y Q A R K 2 1 0 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 2 0 0 0 11 0 1229.5677 O96000 O96000 137 147 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 2 8.1039E-07 181.31 By MS/MS 9 0 1 1 5788000 5788000 0 16294 417 17248 41465 29256 29256 1 3321800 0 YQDTPGVK GDRYPGSTFMDHVLRYQDTPGVKMIVVLGE FMDHVLRYQDTPGVKMIVVLGEIGGTEEYK R Y Q V K M 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 8 0 906.4447 P53396 P53396 704 711 ACLY ATP-citrate synthase yes yes 2 0.0084904 124.08 By MS/MS 3 1.41 1 1 1 1 1 5 16377000 16377000 0 16295 1001 17249 41466;41467;41468;41469;41470 29257;29258;29259 29259 3 481290 0 YQDVDSETFISTR SPEEVADKVLNAIKRYQDVDSETFISTRHV KRYQDVDSETFISTRHVWPEDCEQKVSAKF R Y Q T R H 0 1 0 2 0 1 1 0 0 1 0 0 0 1 0 2 2 0 1 1 0 0 13 0 1559.7104 Q8IYQ7 Q8IYQ7 223 235 THNSL1 Threonine synthase-like 1 yes yes 2 1.1465E-34 256.95 By MS/MS 5 0 1 1 4337200 4337200 0 16296 1882 17250 41471 29260 29260 1 178280 0 YQEAAPNVANNTGPHAASCFGAK NLSYQVHREIPQAERYQEAAPNVANNTGPH ANNTGPHAASCFGAKKGKDEWFSRGKKPIE R Y Q A K K 6 0 3 0 1 1 1 2 1 0 0 1 0 1 2 1 1 0 1 1 0 0 23 0 2374.076 O60716 O60716 600 622 CTNND1 Catenin delta-1 yes yes 3 5.2405E-05 97.49 By MS/MS 5 0.816 1 1 1 3 2731600 2731600 0 16297 260 17251 41472;41473;41474 29261 29261 1 65625 0 YQEALAK HHAAYVNNLNVTEEKYQEALAKGDVTAQIA NLNVTEEKYQEALAKGDVTAQIALQPALKF K Y Q A K G 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 821.42832 P04179 P04179 69 75 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 2 0.036721 110.31 By MS/MS 9 0 1 1 691700 691700 0 16298 446 17252 41475 29262 29262 1 396970 0 YQEALHLGSQLLR ALEARLVSLYFDTKRYQEALHLGSQLLREL KRYQEALHLGSQLLRELKKMDDKALLVEVQ R Y Q L R E 1 1 0 0 0 2 1 1 1 0 4 0 0 0 0 1 0 0 1 0 0 0 13 0 1526.8205 O00231 O00231 143 155 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 3 0.01158 82.069 By MS/MS 7 0 1 1 870100 870100 0 16299 80 17253 41476 29263 29263 1 15549 0 YQEALSELATAVK ARYGTGVFGQNEYLRYQEALSELATAVKAR LRYQEALSELATAVKARIGSSQRHHQSAAK R Y Q V K A 3 0 0 0 0 1 2 0 0 0 2 1 0 0 0 1 1 0 1 1 0 0 13 0 1421.7402 Q9BWL3 Q9BWL3 179 191 C1orf43 Uncharacterized protein C1orf43 yes yes 2 0.0018745 120.59 By MS/MS 8 0 1 1 685220 685220 0 16300 2396 17254 41477 29264 29264 1 45204 0 YQEEVPVYVPK PQVFAPLSEESKNKKYQEEVPVYVPKWMPF KNKKYQEEVPVYVPKWMPFKELMMMLQASL K Y Q P K W 0 0 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 0 2 3 0 0 11 0 1349.6867 O43264 O43264 709 719 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 2 2.6225E-05 172.98 By MS/MS 4.5 0.5 1 1 2 3180500 3180500 0 16301 189 17255 41478;41479 29265 29265 1 90980 0 YQEKWDK NLKIDGALHRELVKRYQEKWDKLLLTSTEK LHRELVKRYQEKWDKLLLTSTEKSHVDLFP R Y Q D K L 0 0 0 1 0 1 1 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 7 1 995.47125 Q7L0Y3 Q7L0Y3 262 268 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 3 0.051899 87.696 By MS/MS 7 0 1 1 1095300 1095300 0 16302 1761 17256 41480 29266 29266 1 19573 0 YQELQITAGR AQRSKDEAEALYQTKYQELQITAGRHGDDL LYQTKYQELQITAGRHGDDLKNSKMEIAEL K Y Q G R H 1 1 0 0 0 2 1 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1177.6091 CON__Q7Z794;Q7Z794 CON__Q7Z794 361 370 KRT77 Keratin, type II cytoskeletal 1b yes no 2 0.0010271 121.61 By matching By MS/MS 3.67 1.6 1 2 1 1 1 2 4 5881400 5788600 92812 + 16303 63 17257 41481;41482;41483;41484;41485;41486 29267;29268;29269;29270;29271 29268 5 151980 133020 YQEQLVQEQELAK VDKQLASELEYDMKKYQEQLVQEQELAKHA KKYQEQLVQEQELAKHADVAGTAGGAEVAP K Y Q A K H 1 0 0 0 0 4 3 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 13 0 1604.8046 P42695 P42695 1259 1271 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 9.2238E-18 224.25 By MS/MS 3 0 1 1 1050100 1050100 0 16304 853 17258 41487 29272 29272 1 27414 0 YQFDPNLGIR QLAPFLPQLVPRLYRYQFDPNLGIRQAMTS PRLYRYQFDPNLGIRQAMTSIWNALVTDKS R Y Q I R Q 0 1 1 1 0 1 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 0 10 0 1221.6142 Q5VYK3 Q5VYK3 1130 1139 ECM29 Proteasome-associated protein ECM29 homolog yes yes 2 0.028242 86.624 By MS/MS 2.5 0.5 1 1 2 3372800 3372800 0 16305 1657 17259 41488;41489 29273 29273 1 93379 0 YQFLEEAFQNQK LTCRDCQLLEHKEHRYQFLEEAFQNQKGAI EHRYQFLEEAFQNQKGAIENLLAKLLEKKN R Y Q Q K G 1 0 1 0 0 3 2 0 0 0 1 1 0 2 0 0 0 0 1 0 0 0 12 0 1543.7307 Q9UPN9 Q9UPN9 309 320 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 2 1.0165E-23 234.9 By MS/MS 3.5 0.5 1 1 2 827050 827050 0 16306 2852 17260 41490;41491 29274 29274 1 21740 0 YQGSFILR GGLRTALYNYIFAKKYQGSFILRLEDTDQT NYIFAKKYQGSFILRLEDTDQTRVVPGAAE K Y Q L R L 0 1 0 0 0 1 0 1 0 1 1 0 0 1 0 1 0 0 1 0 0 0 8 0 982.52362 Q5JPH6 Q5JPH6 67 74 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes yes 2 0.013709 114.89 By MS/MS 6 0 1 1 2356400 2356400 0 16307 1604 17261 41492 29275 29275 1 18375 0 YQGVNLYIK LKRKFEQLKQERISRYQGVNLYIKNLDDTI QERISRYQGVNLYIKNLDDTIDDEKLRKEF R Y Q I K N 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 2 1 0 0 9 0 1096.5917 Q13310 Q13310 291 299 PABPC4 Polyadenylate-binding protein 4 yes yes 2 0.0025685 123.69 By MS/MS 5 0 1 1 1282500 1282500 0 16308 1353 17262 41493 29276 29276 1 52716 0 YQGVNLYVK LKRKFEQMKQDRITRYQGVNLYVKNLDDGI QDRITRYQGVNLYVKNLDDGIDDERLRKEF R Y Q V K N 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 2 2 0 0 9 0 1082.576 P11940;Q4VXU2 P11940 291 299 PABPC1;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like yes no 2 0.0027128 121.62 By MS/MS By MS/MS 5.33 0.471 2 1 2 1 14919000 14764000 155000 16309 560 17263 41494;41495;41496 29277;29278 29278 2 558620 458650 YQIDPDACFSAK WTAGNSNTRFGIAAKYQIDPDACFSAKVNN AAKYQIDPDACFSAKVNNSSLIGLGYTQTL K Y Q A K V 2 0 0 2 1 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 0 0 12 0 1413.6235 P21796 P21796 225 236 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 0.00056862 138.24 By MS/MS 8 0 1 1 2768900 2768900 0 16310 650 17264 41497 29279 29279 1 182660 0 YQLDPTASISAK WTSGTNCTRFGIAAKYQLDPTASISAKVNN AAKYQLDPTASISAKVNNSSLIGVGYTQTL K Y Q A K V 2 0 0 1 0 1 0 0 0 1 1 1 0 0 1 2 1 0 1 0 0 0 12 0 1292.6612 P45880 P45880 236 247 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 2 0.0005023 138.99 By MS/MS By matching 8.33 0.471 2 1 2 1 11568000 11474000 94294 16311 870 17265 41498;41499;41500 29280 29280 1 799820 804440 YQLEIPENFTTR IGCRTIVYWGIGRNRYQLEIPENFTTRNLP RNRYQLEIPENFTTRNLPEEYELKSTKKGC R Y Q T R N 0 1 1 0 0 1 2 0 0 1 1 0 0 1 1 0 2 0 1 0 0 0 12 0 1509.7464 P52701 P52701 977 988 MSH6 DNA mismatch repair protein Msh6 yes yes 2 0.012593 112.13 By MS/MS 3.5 0.5 1 1 2 1050200 1050200 0 16312 989 17266 41501;41502 29281 29281 1 27540 0 YQNYIMEGVK FFLSKIRSHVATCSKYQNYIMEGVKATIKD ATCSKYQNYIMEGVKATIKDASLQPRNVPN K Y Q V K A 0 0 1 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 2 1 0 0 10 0 1243.5907 Q9Y508 Q9Y508 113 122 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 2 0.00084764 119.75 By MS/MS 9 0 1 1 312850 312850 0 16313 2961 17267 41503 29282 29282 1709 1 179550 0 YQPCLPSTQEDVINK SCTEGKGEYTMEYSRYQPCLPSTQEDVINK YQPCLPSTQEDVINKYLEATGQLPVKKGKA R Y Q N K Y 0 0 1 1 1 2 1 0 0 1 1 1 0 0 2 1 1 0 1 1 0 0 15 0 1790.8509 Q96RP9 Q96RP9 720 734 GFM1 Elongation factor G, mitochondrial yes yes 2 0.0013948 140.01 By MS/MS 5 0 1 1 3929400 3929400 0 16314 2247 17268 41504 29283 29283 1 161510 0 YQPLASTASDNDFVTPEPR SQRAPSAKKPSTGSRYQPLASTASDNDFVT ASTASDNDFVTPEPRRTTRRHPNTQQRASK R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2 2.4171E-19 203.05 By MS/MS 3.5 0.5 1 1 2 3104300 3104300 0 16315 1464 17269 41505;41506 29284 29284 1 81386 0 YQQEVDR ALKEAKENASRDRKRYQQEVDRIKEAVRSK NASRDRKRYQQEVDRIKEAVRSKNMARRGH R Y Q D R I 0 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 7 0 936.43011 P33176;Q12840;O60282 P33176 895 901 KIF5B;KIF5A;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A;Kinesin heavy chain isoform 5C yes no 2 0.041499 107.01 By MS/MS 4 0 1 1 591770 591770 0 16316 767 17270 41507 29285 29285 1 16155 0 YQQFKDFQR IAIHRGMAQEERLSRYQQFKDFQRRILVAT EERLSRYQQFKDFQRRILVATNLFGRGMDI R Y Q Q R R 0 1 0 1 0 3 0 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 9 1 1258.6095 O00148;Q13838 O00148 329 337 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.01426 130.56 By MS/MS 6 0 1 1 4506700 4506700 0 16317 70 17271 41508 29286 29286 1 35144 0 YQQFPEFK KPPTSQEEWEAEFQRYQQFPEFKILNHDMT WEAEFQRYQQFPEFKILNHDMTLTEFKFIW R Y Q F K I 0 0 0 0 0 2 1 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 8 0 1085.5182 Q7KZN9 Q7KZN9 124 131 COX15 Cytochrome c oxidase assembly protein COX15 homolog yes yes 2 0.01563 112.41 By MS/MS 1.5 0.5 1 1 2 1778400 1778400 0 16318 1758 17272 41509;41510 29287;29288 29287 2 86888 0 YQQLFEDIR LKKLILSKGKTPALKYQQLFEDIRGQSDIA KTPALKYQQLFEDIRGQSDIAITKDMFEEA K Y Q I R G 0 1 0 1 0 2 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 9 0 1210.5982 P33991 P33991 820 828 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.00028226 158.76 By MS/MS 6.5 2.5 1 1 2 3085200 3085200 0 16319 773 17273 41511;41512 29289;29290 29289 2 198730 0 YQTVIADICR DFPTISLEFRNLAEKYQTVIADICRRMGIG NLAEKYQTVIADICRRMGIGMAEFLDKHVT K Y Q C R R 1 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1237.6125 P37268 P37268 139 148 FDFT1 Squalene synthase yes yes 2 0.00044093 171.33 By MS/MS 7.5 0.5 1 1 2 4984400 4984400 0 16320 814 17274 41513;41514 29291 29291 1 102970 0 YQVEYDAYK CTLYGISWQFDPCCKYQVEYDAYKLSRLPL FDPCCKYQVEYDAYKLSRLPLHTLTSSTPV K Y Q Y K L 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 3 1 0 0 9 0 1177.5292 P17152 P17152 134 142 TMEM11 Transmembrane protein 11, mitochondrial yes yes 2 0.0023806 125.71 By MS/MS 9 0 1 1 959630 959630 0 16321 612 17275 41515 29292 29292 1 550740 0 YRCELLYEGPPDDEAAMGIK QMITIHLPSPVTAQKYRCELLYEGPPDDEA LYEGPPDDEAAMGIKSCDPKGPLMMYISKM K Y R I K S 2 1 0 2 1 0 3 2 0 1 2 1 1 0 2 0 0 0 2 0 0 0 20 1 2326.061 P13639 P13639 367 386 EEF2 Elongation factor 2 yes yes 3 0.0003687 105.38 By MS/MS 4 0 1 1 739640 739640 0 16322 576 17276 41516 29293 29293 362 1 20191 0 YRDVAECGPQQELDLNSPR TVNQNTKAHVLHFGKYRDVAECGPQQELDL AECGPQQELDLNSPRNTTLERQTFYCVPVP K Y R P R N 1 2 1 2 1 2 2 1 0 0 2 0 0 0 2 1 0 0 1 1 0 0 19 1 2246.0386 Q9BTE3 Q9BTE3 102 120 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 3 0.00083195 107.02 By MS/MS 4.5 0.5 1 1 2 725410 725410 0 16323 2349 17277 41517;41518 29294 29294 1 27598 0 YRDVSPFDHSR PCRVAKLPKNKNRNRYRDVSPFDHSRIKLH NRNRYRDVSPFDHSRIKLHQEDNDYINASL R Y R S R I 0 2 0 2 0 0 0 0 1 0 0 0 0 1 1 2 0 0 1 1 0 0 11 1 1377.6426 P18031 P18031 46 56 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.018454 118.23 By MS/MS 6 0 1 1 2007400 2007400 0 16324 620 17278 41519 29295 29295 1 15654 0 YRGIGDCVR VKTQLQLDERSHPPRYRGIGDCVRQTVRSH RSHPPRYRGIGDCVRQTVRSHGVLGLYRGL R Y R V R Q 0 2 0 1 1 0 0 2 0 1 0 0 0 0 0 0 0 0 1 1 0 0 9 1 1094.5291 P53007 P53007 64 72 SLC25A1 Tricarboxylate transport protein, mitochondrial yes yes 3 0.014803 91.265 By MS/MS 8 0 1 1 1296800 1296800 0 16325 996 17279 41520 29296 29296 1 85551 0 YRPGTVALR RKSAPATGGVKKPHRYRPGTVALREIRRYQ VKKPHRYRPGTVALREIRRYQKSTELLIRK R Y R L R E 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 1 1 0 0 9 1 1031.5876 Q71DI3;Q16695;P84243;P68431;Q6NXT2 Q71DI3 42 50 HIST2H3A;HIST3H3;H3F3A;HIST1H3A;H3F3C Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 3 0.01603 88.177 By MS/MS 10 0 1 1 404640 404640 0 16326 1189 17280 41521 29297 29297 1 430090 0 YSALFLGVAYGATR MVPPVQVSPLIKLGRYSALFLGVAYGATRY RYSALFLGVAYGATRYNYLKPRAEEERRIA R Y S T R Y 3 1 0 0 0 0 0 2 0 0 2 0 0 1 0 1 1 0 2 1 0 0 14 0 1487.7773 P56385 P56385 16 29 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.013312 107.85 By MS/MS 10 0 1 1 110100 110100 0 16327 1046 17281 41522 29298 29298 1 117030 0 YSAPVIHVLDASK ATTSKTHTAVKIAPRYSAPVIHVLDASKSV PRYSAPVIHVLDASKSVVVCSQLLDENLKD R Y S S K S 2 0 0 1 0 0 0 0 1 1 1 1 0 0 1 2 0 0 1 2 0 0 13 0 1398.7507 Q99707 Q99707 876 888 MTR Methionine synthase yes yes 2 0.001786 121.68 By MS/MS 3 0 1 1 925870 925870 0 16328 2284 17282 41523 29299 29299 1 24170 0 YSAQGER LSLLEKSLGLSKGNKYSAQGERQIPVLQTN LGLSKGNKYSAQGERQIPVLQTNNGPSLTG K Y S E R Q 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 7 0 809.36678 O43324 O43324 22 28 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 2 0.015477 138.83 By MS/MS 9 0 1 1 697420 697420 0 16329 194 17283 41524 29300 29300 1 400260 0 YSDADIEPFLK NTKEGLAELYEYKKKYSDADIEPFLKNSSQ YKKKYSDADIEPFLKNSSQFFQSYVERGLR K Y S L K N 1 0 0 2 0 0 1 0 0 1 1 1 0 1 1 1 0 0 1 0 0 0 11 0 1296.6238 Q14008 Q14008 1860 1870 CKAP5 Cytoskeleton-associated protein 5 yes yes 2 0.00012158 189.18 By MS/MS 3 0.816 1 1 1 3 1021300 1021300 0 16330 1405 17284 41525;41526;41527 29301;29302 29301 2 42337 0 YSDFEWLR NLPIFKLKESTVRRRYSDFEWLRSELERES ESTVRRRYSDFEWLRSELERESKVVVPPLP R Y S L R S 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 8 0 1114.5084 O60493 O60493 71 78 SNX3 Sorting nexin-3 yes yes 2 0.031446 98.629 By MS/MS 10 0 1 1 45191 45191 0 16331 249 17285 41528 29303 29303 1 48033 0 YSDIDIILLK RHLPKLIPVLVNGMKYSDIDIILLKGDVEE VNGMKYSDIDIILLKGDVEEDETIPDSEQD K Y S L K G 0 0 0 2 0 0 0 0 0 3 2 1 0 0 0 1 0 0 1 0 0 0 10 0 1191.6751 Q92973 Q92973 318 327 TNPO1 Transportin-1 yes yes 2 0.00012198 163.15 By MS/MS 6 1.58 1 1 1 1 4 1794900 1794900 0 16332 2093 17286 41529;41530;41531;41532 29304;29305;29306 29304 3 53895 0 YSDSLVQK GNWAHSGFPEIAFGRYSDSLVQKGYKVARV PEIAFGRYSDSLVQKGYKVARVEQTETPEM R Y S Q K G 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 2 0 0 1 1 0 0 8 0 938.47091 P52701 P52701 469 476 MSH6 DNA mismatch repair protein Msh6 yes yes 2 3.7573E-05 199.07 By MS/MS 2.5 0.5 1 1 2 1537900 1537900 0 16333 989 17287 41533;41534 29307 29307 1 41718 0 YSEAAALLIR RCVLLSAELLKSQSKYSEAAALLIRLTSED KSQSKYSEAAALLIRLTSEDSDLRSALLLE K Y S I R L 3 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 0 0 1 0 0 0 10 0 1105.6132 Q9Y2L5 Q9Y2L5 519 528 TRAPPC8 Trafficking protein particle complex subunit 8 yes yes 2 0.0082126 105.52 By MS/MS 1 0 1 1 0 0 0 16334 2893 17288 41535 29308 29308 1 0 0 YSEFFTGSK DENQNHHLEPEEVLKYSEFFTGSKLVDYAR PEEVLKYSEFFTGSKLVDYARSVHEEF___ K Y S S K L 0 0 0 0 0 0 1 1 0 0 0 1 0 2 0 2 1 0 1 0 0 0 9 0 1064.4815 Q9BRK5 Q9BRK5 342 350 SDF4 45 kDa calcium-binding protein yes yes 2 0.020116 96.668 By MS/MS 7 0.816 1 1 1 3 6678800 6678800 0 16335 2324 17289 41536;41537;41538 29309 29309 1 82651 0 YSEHTQLQTQQR GAEGVDHPSHTLQHRYSEHTQLQTQQRAVQ QHRYSEHTQLQTQQRAVQEAIQVKLNEFEQ R Y S Q R A 0 1 0 0 0 4 1 0 1 0 1 0 0 0 0 1 2 0 1 0 0 0 12 0 1517.7223 Q96Q15 Q96Q15 2536 2547 SMG1 Serine/threonine-protein kinase SMG1 yes yes 3 0.017874 90.614 By MS/MS 1 0 1 1 0 0 0 16336 2241 17290 41539 29310 29310 1 0 0 YSELTTVQQQLIR KFFCFQVLEHQVKYKYSELTTVQQQLIRET YKYSELTTVQQQLIRETLISWLQAQMLNPQ K Y S I R E 0 1 0 0 0 3 1 0 0 1 2 0 0 0 0 1 2 0 1 1 0 0 13 0 1577.8413 O43592 O43592 68 80 XPOT Exportin-T yes yes 2 2.832E-31 238.01 By MS/MS 4 0 1 1 0 0 0 16337 208 17291 41540 29311 29311 1 0 0 YSESLLCSNLESATYSNR NELVKKGNHKKAIEKYSESLLCSNLESATY SLLCSNLESATYSNRALCYLVLKQYTEAVK K Y S N R A 1 1 2 0 1 0 2 0 0 0 3 0 0 0 0 5 1 0 2 0 0 0 18 0 2092.9371 Q15785 Q15785 216 233 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 2 9.3179E-34 244.71 By MS/MS 8 0 1 1 594440 594440 0 16338 1521 17292 41541 29312 29312 1 39215 0 YSESVKDAQEKLEQAEK ALQKKLKGTEDEVEKYSESVKDAQEKLEQA ESVKDAQEKLEQAEKKATDAEADVASLNRR K Y S E K K 2 0 0 1 0 2 4 0 0 0 1 3 0 0 0 2 0 0 1 1 0 0 17 2 1980.964 CON__Q3SX28 CON__Q3SX28 60 76 yes yes 5 0.04887 48.131 By MS/MS 5 0 1 1 512750 512750 0 + 16339 58 17293 41542 29313 29313 0 21076 0 YSFLQFDPAPR CGNQAAIMELDDTLKYSFLQFDPAPRRGEP DTLKYSFLQFDPAPRRGEPHVTRRTPDYFL K Y S P R R 1 1 0 1 0 1 0 0 0 0 1 0 0 2 2 1 0 0 1 0 0 0 11 0 1339.6561 P67775;P62714 P67775 284 294 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes no 2 0.00010208 161.51 By MS/MS 8 0 1 1 2527300 2527300 0 16340 1181 17294 41543 29314 29314 1 166720 0 YSGAYGASVSDEELK DRMKESSPSGSKSQRYSGAYGASVSDEELK YSGAYGASVSDEELKRRVAEELALEQAKKE R Y S L K R 2 0 0 1 0 0 2 2 0 0 1 1 0 0 0 3 0 0 2 1 0 0 15 0 1574.71 Q9NX63 Q9NX63 49 63 CHCHD3 MICOS complex subunit MIC19 yes yes 2 1.4101E-20 253.42 By MS/MS 8 0 1 1 3387000 3387000 0 16341 2682 17295 41544 29315 29315 1 223440 0 YSGDQILIR ILPVVVGSWWYRSIRYSGDQILIRTTQIYT WYRSIRYSGDQILIRTTQIYTYFVYKTRNM R Y S I R T 0 1 0 1 0 1 0 1 0 2 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1063.5662 Q9UGP8 Q9UGP8 218 226 SEC63 Translocation protein SEC63 homolog yes yes 2 0.00040063 155.58 By MS/MS 4 0 1 1 2299300 2299300 0 16342 2775 17296 41545 29316 29316 1 62769 0 YSGETVQER LLGTPVGGLLMAFQKYSGETVQERKQKDRK LMAFQKYSGETVQERKQKDRKALHELKLEE K Y S E R K 0 1 0 0 0 1 2 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 9 0 1067.4884 Q9NPL8 Q9NPL8 212 220 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes yes 2 7.4942E-05 172.25 By MS/MS By matching 5.6 3.38 1 1 2 1 4 1 13123000 13104000 18619 16343 2583 17297 41546;41547;41548;41549;41550 29317;29318 29318 2 925130 158840 YSGNPLDPPLR SENFRVIALGLPVPRYSGNPLDPPLRSRFQ PVPRYSGNPLDPPLRSRFQARDIYYLPFKD R Y S L R S 0 1 1 1 0 0 0 1 0 0 2 0 0 0 3 1 0 0 1 0 0 0 11 0 1227.6248 A3KMH1 A3KMH1 248 258 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 2 0.025176 84.687 By MS/MS 2 0 1 1 938130 938130 0 16344 13 17298 41551 29319 29319 1 46630 0 YSGRPVNLMGTSL TKELQKLIEADISKRYSGRPVNLMGTSL__ KRYSGRPVNLMGTSL_______________ R Y S S L - 0 1 1 0 0 0 0 2 0 0 2 0 1 0 1 2 1 0 1 1 0 0 13 1 1393.7024 Q96JB5 Q96JB5 494 506 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes yes 2 0.020808 78.548 By MS/MS 5 0 1 1 0 0 0 16345 2206 17299 41552 29320 29320 1408 1 0 0 YSGTLNLDR ENQTPEFFQDVCKPKYSGTLNLDRVTREAC DVCKPKYSGTLNLDRVTREACPELDYFVVF K Y S D R V 0 1 1 1 0 0 0 1 0 0 2 0 0 0 0 1 1 0 1 0 0 0 9 0 1037.5142 P49327 P49327 1996 2004 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 3.9385E-06 181.55 By MS/MS 3 1.41 1 1 1 1 1 5 16846000 16846000 0 16346 915 17300 41553;41554;41555;41556;41557 29321;29322;29323;29324;29325 29323 5 754510 0 YSHEVLSEENFK LGRCNYSQSERNLCKYSHEVLSEENFKVLK LCKYSHEVLSEENFKVLKNHELSGLNKEEL K Y S F K V 0 0 1 0 0 0 3 0 1 0 1 1 0 1 0 2 0 0 1 1 0 0 12 0 1480.6834 Q7Z2W4 Q7Z2W4 108 119 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 3 0.0039848 112.64 By MS/MS 4.5 0.5 1 1 2 3575000 3575000 0 16347 1777 17301 41558;41559 29326 29326 1 105240 0 YSHVQEVQER DHEDYDPQTVRLGSRYSHVQEVQERLNFLR RLGSRYSHVQEVQERLNFLRFLLKDGQLWL R Y S E R L 0 1 0 0 0 2 2 0 1 0 0 0 0 0 0 1 0 0 1 2 0 0 10 0 1273.6051 Q93008;O00507 Q93008 648 657 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 2;3 0.00091809 137.46 By MS/MS 2.57 1.4 2 2 1 1 1 7 5349600 5349600 0 16348 2096 17302 41560;41561;41562;41563;41564;41565;41566 29327;29328;29329;29330 29328 4 238950 0 YSLEPVAVELK MSHLGRPDGVPMPDKYSLEPVAVELKSLLG MPDKYSLEPVAVELKSLLGKDVLFLKDCVG K Y S L K S 1 0 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 1 2 0 0 11 0 1246.6809 P00558 P00558 76 86 PGK1 Phosphoglycerate kinase 1 yes yes 2 1.4153E-10 198.72 By MS/MS 7 0 1 1 3016400 3016400 0 16349 432 17303 41567 29331 29331 1 53904 0 YSLVIIPK AQSAVLMATGFIWSRYSLVIIPKNWSLFAV TGFIWSRYSLVIIPKNWSLFAVNFFVGAAG R Y S P K N 0 0 0 0 0 0 0 0 0 2 1 1 0 0 1 1 0 0 1 1 0 0 8 0 931.57425 O95563 O95563 85 92 MPC2 Mitochondrial pyruvate carrier 2 yes yes 2 0.0046954 138.24 By MS/MS 9.5 0.5 1 1 2 1057700 1057700 0 16350 398 17304 41568;41569 29332 29332 1 1098100 0 YSNDPVVASLAQDIFK MESKICPFTIAIFLKYSNDPVVASLAQDIF SNDPVVASLAQDIFKELSQIEACQGPMQMR K Y S F K E 2 0 1 2 0 1 0 0 0 1 1 1 0 1 1 2 0 0 1 2 0 0 16 0 1765.8887 Q96P70 Q96P70 616 631 IPO9 Importin-9 yes yes 2 0.025762 76.357 By MS/MS 4 0 1 1 100880 100880 0 16351 2237 17305 41570 29333;29334 29333 2 2754 0 YSNENLDLAR TRNYLDWLTSIPWGKYSNENLDLARAQAVL IPWGKYSNENLDLARAQAVLEEDHYGMEDV K Y S A R A 1 1 2 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 10 0 1193.5677 P36776 P36776 473 482 LONP1 Lon protease homolog, mitochondrial yes yes 2 3.3091E-07 191.4 By MS/MS 4 0 1 1 5832300 5832300 0 16352 809 17306 41571 29335 29335 1 159210 0 YSNSALGHVNCTIK YLESEVAISEELVQKYSNSALGHVNCTIKE KYSNSALGHVNCTIKELRRLFLVDDLVDSL K Y S I K E 1 0 2 0 1 0 0 1 1 1 1 1 0 0 0 2 1 0 1 1 0 0 14 0 1562.7511 Q9NQC3 Q9NQC3 1091 1104 RTN4 Reticulon-4 yes yes 2;3 5.1751E-05 154.23 By MS/MS 6 0 2 2 4984900 4984900 0 16353 2587 17307 41572;41573 29336;29337 29337 2 38872 0 YSNSEVVTGSGR QIREDHMRFISELARYSNSEVVTGSGRQEA LARYSNSEVVTGSGRQEAQKTDAEYRKLFD R Y S G R Q 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 3 1 0 1 2 0 0 12 0 1254.584 Q7L576 Q7L576 366 377 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 2 2.5279E-11 209.19 By MS/MS 3 0 1 1 557050 557050 0 16354 1765 17308 41574 29338 29338 1 14542 0 YSPTSPTYSPTSPK TYSPTSPVYTPTSPKYSPTSPTYSPTSPKY KYSPTSPTYSPTSPKYSPTSPTYSPTSPKG K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.0040952 107.85 By MS/MS 2 0 1 1 820060 820060 0 16355 681 17309 41575 29339 29339 1 40761 0 YSPTSPTYSPTSPVYTPTSPK KYSPTSPTYSPTTPKYSPTSPTYSPTSPVY TYSPTSPVYTPTSPKYSPTSPTYSPTSPKY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6 5 5 0 3 1 0 0 21 0 2257.079 P24928 P24928 1888 1908 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.00015294 115.68 By MS/MS 2 0 1 1 317640 317640 0 16356 681 17310 41576 29340 29340 1 15788 0 YSPTSPTYSPTTPK KYSPTSPKYSPTSPKYSPTSPTYSPTTPKY KYSPTSPTYSPTTPKYSPTSPTYSPTSPVY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.007775 98.105 By MS/MS 2.5 0.5 1 1 2 530740 530740 0 16357 681 17311 41577;41578 29341 29341 1 24180 0 YSQICAK ______________________________ QAGLSYIRYSQICAKAVRDALKTEFKANAE R Y S A K A 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 7 0 868.41129 P56381;Q5VTU8 P56381 15 21 ATP5E;ATP5EP2 ATP synthase subunit epsilon, mitochondrial;ATP synthase subunit epsilon-like protein, mitochondrial yes no 2 0.020651 124.59 By MS/MS By matching 8.33 1.49 1 1 1 1 2 1 5 2422300 2204800 217500 16358 1045 17312 41579;41580;41581;41582;41583;41584 29342 29342 1 2343500 3125600 YSQIPSVLVMNK TRNQLSPQLLRCLTKYSQIPSVLVMNKVDC LTKYSQIPSVLVMNKVDCLKQKSVLLELTA K Y S N K V 0 0 1 0 0 1 0 0 0 1 1 1 1 0 1 2 0 0 1 2 0 0 12 0 1377.7326 O75616 O75616 226 237 ERAL1 GTPase Era, mitochondrial yes yes 2 4.1005E-11 202.03 By MS/MS 7 0 1 1 2429700 2429700 0 16359 321 17313 41585 29343 29343 177 1 43419 0 YSQSDLEQTK RQVQSQAHGLQMRLKYSQSDLEQTKTRHLA QMRLKYSQSDLEQTKTRHLALNLQEKSKLE K Y S T K T 0 0 0 1 0 2 1 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 10 0 1197.5513 Q14683 Q14683 714 723 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 3.9082E-16 228.84 By MS/MS 2 0.816 1 1 1 3 1407600 1407600 0 16360 1440 17314 41586;41587;41588 29344 29344 1 38280 0 YSQTGNYELAVALSR FFNSAVQKAAPGSQRYSQTGNYELAVALSR YSQTGNYELAVALSRWVFKEEGVLRVGPVS R Y S S R W 2 1 1 0 0 1 1 1 0 0 2 0 0 0 0 2 1 0 2 1 0 0 15 0 1670.8264 P39656 P39656 283 297 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 2 6.1461E-50 281.32 By MS/MS 5.5 0.5 1 1 2 5068200 5068200 0 16361 825 17315 41589;41590 29345 29345 1 41990 0 YSQVLANGLDNK PDWFLNRQKDVKDGKYSQVLANGLDNKLRE DGKYSQVLANGLDNKLREDLERLKKIRAHR K Y S N K L 1 0 2 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1320.6674 P62269 P62269 95 106 RPS18 40S ribosomal protein S18 yes yes 2 7.1363E-24 240 By MS/MS 9.5 0.5 1 1 2 4526300 4526300 0 16362 1124 17316 41591;41592 29346;29347 29347 2 3499300 0 YSQYQQAIYK LESQTYEVFEKDPIKYSQYQQAIYKCLLDR KDPIKYSQYQQAIYKCLLDRVPEEEKDTNV K Y S Y K C 1 0 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 3 0 0 0 10 0 1290.6245 O14744 O14744 334 343 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 2 1.244E-10 204.79 By MS/MS By MS/MS 3.25 1.79 1 1 2 3 1 2785200 2518400 266800 16363 125 17317 41593;41594;41595;41596 29348;29349;29350 29350 3 104980 789450 YSSAFTNR KQADEEFQILANSWRYSSAFTNRIFFAMVD ILANSWRYSSAFTNRIFFAMVDFDEGSDVF R Y S N R I 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 2 1 0 1 0 0 0 8 0 944.43519 Q9H0U3 Q9H0U3 106 113 MAGT1 Magnesium transporter protein 1 yes yes 2 0.0080258 125.81 By MS/MS 1.5 0.5 1 1 2 501230 501230 0 16364 2458 17318 41597;41598 29351 29351 1 24655 0 YSSDVQEMILSSATADR SVAVNVAPGRLCAGRYSSDVQEMILSSATA SDVQEMILSSATADRIPIAVSGVRGMGFLM R Y S D R I 2 1 0 2 0 1 1 0 0 1 1 0 1 0 0 4 1 0 1 1 0 0 17 0 1871.8571 Q92616 Q92616 2505 2521 GCN1L1 Translational activator GCN1 yes yes 2 3.9661E-25 220.97 By MS/MS 2 0 1 1 346300 346300 0 16365 2068 17319 41599 29352 29352 1356 1 17213 0 YSSLQLNCEYR SEFKQIYKGPDSSFRYSSLQLNCEYRFRVC SSFRYSSLQLNCEYRFRVCAIRQCQDSLGH R Y S Y R F 0 1 1 0 1 1 1 0 0 0 2 0 0 0 0 2 0 0 2 0 0 0 11 0 1431.6453 Q9Y2H6 Q9Y2H6 1105 1115 FNDC3A Fibronectin type-III domain-containing protein 3A yes yes 2 0.00056738 163.9 By MS/MS 3 0 1 1 624580 624580 0 16366 2887 17320 41600 29353 29353 1 16305 0 YSSSKHYSSSR ______________________________ MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG R Y S S R S 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 6 0 0 2 0 0 0 11 1 1287.5844 CON__P13645;P13645 CON__P13645 5 15 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.0044494 114.97 By MS/MS 1 0 1 1 0 0 0 + 16367 49 17321 41601 29354 29354 1 0 0 YSTDVSVDEVK AQHSQHRTPCKGGIRYSTDVSVDEVKALAS GGIRYSTDVSVDEVKALASLMTYKCAVVDV R Y S V K A 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 2 1 0 1 3 0 0 11 0 1240.5823 P00367;P49448 P00367 152 162 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 2 4.3264E-07 187.97 By MS/MS 6 0 1 1 15087000 15087000 0 16368 425 17322 41602 29355 29355 1 117650 0 YSTSGSSGLTTGK LCGKFVLRPLRPCRRYSTSGSSGLTTGKIA RRYSTSGSSGLTTGKIAGAGLLFVGGGIGG R Y S G K I 0 0 0 0 0 0 0 3 0 0 1 1 0 0 0 4 3 0 1 0 0 0 13 0 1244.5885 Q16891 Q16891 33 45 IMMT MICOS complex subunit MIC60 yes yes 2 0.0054883 101.35 By MS/MS By matching 5 0 2 1 1 1462700 1445500 17149 16369 1554 17323 41603;41604 29356 29356 1 59416 50743 YSVDIPLDK SFVKVYNYNHLMPTRYSVDIPLDKTVVNKD HLMPTRYSVDIPLDKTVVNKDVFRDPALKR R Y S D K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 9 0 1048.5441 P61353 P61353 85 93 RPL27 60S ribosomal protein L27 yes yes 2 0.00786 109.48 By MS/MS By matching 10 0 2 1 1 1387400 1326800 60576 16370 1098 17324 41605;41606 29357 29357 1 1410200 1553700 YSVLLPTYNER RSRRELEVRSPRQNKYSVLLPTYNERENLP RQNKYSVLLPTYNERENLPLIVWLLVKSFS K Y S E R E 0 1 1 0 0 0 1 0 0 0 2 0 0 0 1 1 1 0 2 1 0 0 11 0 1353.6929 O60762 O60762 27 37 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 2 0.0042601 122.33 By MS/MS By matching 8 0 2 1 1 10920000 10860000 59737 16371 263 17325 41607;41608 29358 29358 1 716440 509630 YSVQLLTPANLLAK ALNHLGEIGTKTTLRYSVQLLTPANLLAKI RYSVQLLTPANLLAKINGKDSIEKEHVEEI R Y S A K I 2 0 1 0 0 1 0 0 0 0 4 1 0 0 1 1 1 0 1 1 0 0 14 0 1529.8817 Q9Y265 Q9Y265 405 418 RUVBL1 RuvB-like 1 yes yes 2 6.497E-12 196.67 By MS/MS 6 0 1 1 21300000 21300000 0 16372 2870 17326 41609 29359 29359 1 166100 0 YSYNTEWR SREYTEDGQVKKETRYSYNTEWRSEIINSK QVKKETRYSYNTEWRSEIINSKNFDREIGH R Y S W R S 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 2 0 0 0 8 0 1117.4829 Q9BTV4 Q9BTV4 145 152 TMEM43 Transmembrane protein 43 yes yes 2 0.0084904 124.08 By MS/MS 7 0 1 1 1050200 1050200 0 16373 2353 17327 41610 29360 29360 1 18766 0 YSYQYTVANK KIVPTVYEDKSGKQRYSYQYTVANKEYVAY SGKQRYSYQYTVANKEYVAYSHTGRIIPAI R Y S N K E 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 1 0 3 1 0 0 10 0 1235.5823 Q969X5 Q969X5 205 214 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 2 6.3591E-16 226.09 By MS/MS 8 0 1 1 2279600 2279600 0 16374 2110 17328 41611 29361 29361 1 150380 0 YTAAVPYR DEHRCASKYGRDWERYTAAVPYRLLPGIF_ YGRDWERYTAAVPYRLLPGIF_________ R Y T Y R L 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 2 1 0 0 8 0 939.48142 Q9UBM7 Q9UBM7 462 469 DHCR7 7-dehydrocholesterol reductase yes yes 2 0.0042045 140.98 By MS/MS By matching 5.33 2.94 1 1 1 1 1 2 1 1 8 1 18632000 18548000 84100 16375 2753 17329 41612;41613;41614;41615;41616;41617;41618;41619;41620 29362;29363;29364;29365;29366;29367 29363 6 860920 345250 YTAESSDTLCPR IVMPTTKEKCPRCWKYTAESSDTLCPRCAE CWKYTAESSDTLCPRCAEVVSGK_______ K Y T P R C 1 1 0 1 1 0 1 0 0 0 1 0 0 0 1 2 2 0 1 0 0 0 12 0 1398.6085 Q9NSE4 Q9NSE4 993 1004 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 2 2.0107E-06 176.48 By MS/MS 4 0 1 1 5113800 5113800 0 16376 2624 17330 41621 29368 29368 1 139600 0 YTALNLIGPR MPKDSNLLLEDVTWKYTALNLIGPRAVDVL DVTWKYTALNLIGPRAVDVLSELSYAPMTP K Y T P R A 1 1 1 0 0 0 0 1 0 1 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1116.6291 Q8NCN5 Q8NCN5 621 630 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes yes 2 4.4855E-06 176.44 By MS/MS 4 0.816 1 1 1 3 1217400 1217400 0 16377 1955 17331 41622;41623;41624 29369 29369 1 36393 0 YTAQVDAEEK EKKFNALKVPVPEDKYTAQVDAEEKEDVKS VPEDKYTAQVDAEEKEDVKSCAEWVSLSKA K Y T E K E 2 0 0 1 0 1 2 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 10 0 1152.5299 O75947 O75947 86 95 ATP5H ATP synthase subunit d, mitochondrial yes yes 2 4.0867E-16 228.64 By MS/MS 9 0 1 1 740610 740610 0 16378 340 17332 41625 29370 29370 1 425040 0 YTAQVDAEEKEDVK EKKFNALKVPVPEDKYTAQVDAEEKEDVKS KYTAQVDAEEKEDVKSCAEWVSLSKARIVE K Y T V K S 2 0 0 2 0 1 3 0 0 0 0 2 0 0 0 0 1 0 1 2 0 0 14 1 1623.7628 O75947 O75947 86 99 ATP5H ATP synthase subunit d, mitochondrial yes yes 2;3 8.98E-87 336.33 By MS/MS By matching 9 0 3 2 1 6877400 6849200 28189 16379 340 17333 41626;41627;41628 29371;29372 29372 2 3930800 303800 YTAVVLNR PFTNILCGIIFVERRYTAVVLNRLIKEAGK IIFVERRYTAVVLNRLIKEAGKQDPELAYI R Y T N R L 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 2 0 0 8 0 934.52362 Q9UPY3 Q9UPY3 452 459 DICER1 Endoribonuclease Dicer yes yes 2 0.019122 107.9 By MS/MS By matching 2.33 0.471 2 1 2 1 368820 300880 67934 16380 2856 17334 41629;41630;41631 29373 29373 1 11309 57193 YTDIRGQPR DFFANMVVDAVLAIKYTDIRGQPRYPVNSV AVLAIKYTDIRGQPRYPVNSVNILKAHGRS K Y T P R Y 0 2 0 1 0 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 9 1 1104.5676 P17987 P17987 181 189 TCP1 T-complex protein 1 subunit alpha yes yes 3 0.011238 94.114 By MS/MS 6.5 0.5 1 1 2 3359000 3359000 0 16381 619 17335 41632;41633 29374 29374 1 28592 0 YTEQITNEK LDVLEEIPKNAAYRKYTEQITNEKLAMVKA NAAYRKYTEQITNEKLAMVKAEPDVKKLED K Y T E K L 0 0 1 0 0 1 2 0 0 1 0 1 0 0 0 0 2 0 1 0 0 0 9 0 1124.535 Q16718 Q16718 47 55 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 2 2.7895E-16 238.51 By MS/MS 10 0 1 1 3537100 3537100 0 16382 1544 17336 41634 29375 29375 1 3759600 0 YTGTLDCAK IKCLLQIQASSGESKYTGTLDCAKKLYQEF SSGESKYTGTLDCAKKLYQEFGIRGIYKGT K Y T A K K 1 0 0 1 1 0 0 1 0 0 1 1 0 0 0 0 2 0 1 0 0 0 9 0 1027.4644 O43772 O43772 149 157 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 2 0.0028304 120.87 By MS/MS 8.5 0.5 1 1 2 2827400 2827400 0 16383 222 17337 41635;41636 29376 29376 1 336180 0 YTGYGNAAGLLAAR FLFVLCSESVPRFIKYTGYGNAAGLLAARG KYTGYGNAAGLLAARGLMAGGRPEGQYSED K Y T A R G 4 1 1 0 0 0 0 3 0 0 2 0 0 0 0 0 1 0 2 0 0 0 14 0 1396.7099 Q9NPQ8;Q9NVN3 Q9NPQ8 410 423 RIC8A;RIC8B Synembryn-A;Synembryn-B yes no 2 1.317E-25 238.51 By MS/MS 5.5 0.5 1 1 2 2101100 2101100 0 16384 2584 17338 41637;41638 29377 29377 1 43446 0 YTIIPLNK VTGKKLLERGELKRRYTIIPLNKISARCIA RGELKRRYTIIPLNKISARCIAPETLRVAQ R Y T N K I 0 0 1 0 0 0 0 0 0 2 1 1 0 0 1 0 1 0 1 0 0 0 8 0 960.56442 O95347 O95347 573 580 SMC2 Structural maintenance of chromosomes protein 2 yes yes 2 0.031717 98.523 By MS/MS 3.5 0.5 1 1 2 1063800 1063800 0 16385 385 17339 41639;41640 29378;29379 29378 2 28013 0 YTKDHTVR EPLCETCVEAHQRVKYTKDHTVRSTGPAKS EAHQRVKYTKDHTVRSTGPAKSRDGERTVY K Y T V R S 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 8 1 1018.5196 Q13263 Q13263 186 193 TRIM28 Transcription intermediary factor 1-beta yes yes 2 0.024914 147.19 By MS/MS By matching 4 0 2 1 1 392120 387140 4982.6 16386 1351 17340 41641;41642 29380 29380 1 10568 10411 YTLDEFGTAR TQAMEALQDRPVLYKYTLDEFGTARRSTVV PVLYKYTLDEFGTARRSTVVRGFIDALTRG K Y T A R R 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 2 0 1 0 0 0 10 0 1171.551 Q9Y2V7 Q9Y2V7 264 273 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 2 0.002258 153.05 By MS/MS 5 0 1 1 0 0 0 16387 2903 17341 41643 29381 29381 1 0 0 YTPVQQGPVGVNVTYGGDPIPK DVDIIDHHDNTYTVKYTPVQQGPVGVNVTY PVGVNVTYGGDPIPKSPFSVAVSPSLDLSK K Y T P K S 0 0 1 1 0 2 0 4 0 1 0 1 0 0 4 0 2 0 2 4 0 0 22 0 2285.1692 P21333 P21333 937 958 FLNA Filamin-A yes yes 2 0.00013347 99.069 By MS/MS 2.5 0.5 1 1 2 400060 400060 0 16388 648 17342 41644;41645 29382;29383 29383 2 16797 0 YTQGGLENLELSR NPHNHLYCQQYAEVKYTQGGLENLELSRKY VKYTQGGLENLELSRKYFAQALKLNNRNMR K Y T S R K 0 1 1 0 0 1 2 2 0 0 3 0 0 0 0 1 1 0 1 0 0 0 13 0 1478.7365 Q15006 Q15006 200 212 EMC2 ER membrane protein complex subunit 2 yes yes 2 3.8735E-46 282.21 By MS/MS 8 0 1 1 5320800 5320800 0 16389 1459 17343 41646 29384 29384 1 351010 0 YTQNNFITGVR VRVKAVLKKREYGSKYTQNNFITGVRAINE YGSKYTQNNFITGVRAINEFCLKSSDLEQL K Y T V R A 0 1 2 0 0 1 0 1 0 1 0 0 0 1 0 0 2 0 1 1 0 0 11 0 1311.6571 Q6PML9 Q6PML9 125 135 SLC30A9 Zinc transporter 9 yes yes 2 0.053693 83.862 By MS/MS 1 0 1 1 135580 135580 0 16390 1720 17344 41647 29385 29385 1 6624.1 0 YTQPNICR LDCQTVIRDVEQQFKYTQPNICRNPVCANR DVEQQFKYTQPNICRNPVCANRRRFLLDTN K Y T C R N 0 1 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 8 0 1050.4917 Q14566 Q14566 174 181 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.014183 114.28 By MS/MS 4 0 1 1 3478800 3478800 0 16391 1436 17345 41648 29386 29386 1 94969 0 YTQQGFGNLPICMAK KDIELSPEAQAKIDRYTQQGFGNLPICMAK YTQQGFGNLPICMAKTHLSLSHQPDKKGVP R Y T A K T 1 0 1 0 1 2 0 2 0 1 1 1 1 1 1 0 1 0 1 0 0 0 15 0 1726.8171 Q6UB35 Q6UB35 895 909 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 1.1637E-07 171.26 By MS/MS By matching 4.33 0.471 2 1 2 1 2563500 2539400 24105 16392 1726 17346 41649;41650;41651 29387 29387 1232 1 72095 50369 YTQSNSVCYAK ESALRDLIVATIAVKYTQSNSVCYAKNGQV IAVKYTQSNSVCYAKNGQVIGIGAGQQSRI K Y T A K N 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 2 1 0 2 1 0 0 11 0 1319.5816 P31939 P31939 427 437 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.0031574 144.77 By MS/MS 6 0 1 1 1340500 1340500 0 16393 757 17347 41652 29388 29388 0 10453 0 YTQVGPDHNR LNQYFQKEKIQGEYKYTQVGPDHNRSFIAE QGEYKYTQVGPDHNRSFIAEMTIYIKQLGR K Y T N R S 0 1 1 1 0 1 0 1 1 0 0 0 0 0 1 0 1 0 1 1 0 0 10 0 1185.5527 Q08211 Q08211 200 209 DHX9 ATP-dependent RNA helicase A yes yes 2;3 0.0034995 112.36 By MS/MS 2.25 0.829 1 1 2 4 668620 668620 0 16394 1287 17348 41653;41654;41655;41656 29389;29390 29390 2 19914 0 YTRPTPVQK VEMGEIIMGNIELTRYTRPTPVQKHAIPII NIELTRYTRPTPVQKHAIPIIKEKRDLMAC R Y T Q K H 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 2 0 1 1 0 0 9 1 1088.5978 O00571;O15523 O00571 200 208 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.0047187 120.99 By MS/MS 4 1.41 1 1 1 1 1 5 13871000 13871000 0 16395 105 17349 41657;41658;41659;41660;41661 29391 29391 1 495860 0 YTSIPTSVEESGK IFQNLCDITRVLLWRYTSIPTSVEESGKKE WRYTSIPTSVEESGKKEKGKSISLLCLEGL R Y T G K K 0 0 0 0 0 0 2 1 0 1 0 1 0 0 1 3 2 0 1 1 0 0 13 0 1396.6722 Q9NVI1 Q9NVI1 885 897 FANCI Fanconi anemia group I protein yes yes 2 0.0034529 111.86 By MS/MS 3 0 1 1 1022200 1022200 0 16396 2654 17350 41662 29392 29392 1 26684 0 YTSQIVGR LVSLILLGKVQQLPKYTSQIVGRFIKPLSN KVQQLPKYTSQIVGRFIKPLSNAYHELAQV K Y T G R F 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 0 8 0 922.48723 Q9UNS2 Q9UNS2 244 251 COPS3 COP9 signalosome complex subunit 3 yes yes 2 0.0018492 159.2 By MS/MS 7 0 1 1 3734900 3734900 0 16397 2847 17351 41663 29393 29393 1 66743 0 YTTPEDATPEPGEDPR AGKSKIEDYFPEFARYTTPEDATPEPGEDP TTPEDATPEPGEDPRVTRAKYFIRDEFLRI R Y T P R V 1 1 0 2 0 0 3 1 0 0 0 0 0 0 4 0 3 0 1 0 0 0 16 0 1773.7693 P63092;Q5JWF2 P63092 318 333 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.0059981 101.72 By MS/MS 7.5 0.5 1 1 2 2889800 2889800 0 16398 1168 17352 41664;41665 29394 29394 1 56026 0 YTTTSSSSR GGGLSSVGGGSSTIKYTTTSSSSRKSYKH_ GSSTIKYTTTSSSSRKSYKH__________ K Y T S R K 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 1 0 0 0 9 0 988.44615 CON__P02538;P02538;CON__P48668;P48668;P04259 CON__P02538 551 559 KRT6A;KRT6C;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B no no 2 0.00063318 150.36 By MS/MS By MS/MS 4.25 0.829 1 1 2 1 3 444200 330210 113990 + 16399 36;53;449 17353 41666;41667;41668;41669 29395;29396;29397 29395 3 13573 196010 YTVYCSLIK LSNLFHGMDKNTPVRYTVYCSLIKVAASCG KNTPVRYTVYCSLIKVAASCGAIQYIPTEL R Y T I K V 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 1 1 0 2 1 0 0 9 0 1145.5791 Q7L2H7 Q7L2H7 121 129 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 2 3.6679E-06 182.53 By MS/MS 8.5 1.12 1 1 1 1 4 16620000 16620000 0 16400 1764 17354 41670;41671;41672;41673 29398 29398 1 535640 0 YVAAAFPSACGK HMLILGITSPAGKKRYVAAAFPSACGKTNL KKRYVAAAFPSACGKTNLAMMRPALPGWKV R Y V G K T 4 0 0 0 1 0 0 1 0 0 0 1 0 1 1 1 0 0 1 1 0 0 12 0 1240.591 Q16822 Q16822 297 308 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes yes 2 0.010107 96.89 By MS/MS 6 0.816 1 1 1 3 8717300 8717300 0 16401 1550 17355 41674;41675;41676 29399;29400 29399 2 156210 0 YVAEIEKEKEENEK RDQSLKILNPEEIEKYVAEIEKEKEENEKK KYVAEIEKEKEENEKKKQKKAS________ K Y V E K K 1 0 1 0 0 0 6 0 0 1 0 3 0 0 0 0 0 0 1 1 0 0 14 2 1736.8469 O14818 O14818 228 241 PSMA7 Proteasome subunit alpha type-7 yes yes 3 0.026951 73.877 By MS/MS By matching 8 0 2 1 1 1984900 1961700 23293 16402 129 17356 41677;41678 29401 29401 1 129410 198720 YVALTSLLK NILGRFLLNNDKNIRYVALTSLLKTVQTDH NDKNIRYVALTSLLKTVQTDHNAVQRHRST R Y V L K T 1 0 0 0 0 0 0 0 0 0 3 1 0 0 0 1 1 0 1 1 0 0 9 0 1006.6063 O43747 O43747 326 334 AP1G1 AP-1 complex subunit gamma-1 yes yes 2 0.016646 98.629 By MS/MS 4 0 1 1 300390 300390 0 16403 219 17357 41679 29402 29402 1 8200.3 0 YVANLFPYK PLNPIKQDVKKGKLRYVANLFPYKGYIWNY KKGKLRYVANLFPYKGYIWNYGAIPQTWED R Y V Y K G 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 2 1 0 0 9 0 1113.5859 Q15181 Q15181 80 88 PPA1 Inorganic pyrophosphatase yes yes 2 0.01702 98.418 By MS/MS 8 0 1 1 267660 267660 0 16404 1485 17358 41680 29403 29403 1 17658 0 YVAQAHDKPR DPKDVREWQHEEFYRYVAQAHDKPRYTLHY EEFYRYVAQAHDKPRYTLHYKTDAPLNIRS R Y V P R Y 2 1 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 10 1 1183.6098 Q12931 Q12931 317 326 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 2;3 7.6195E-10 206.43 By MS/MS 5.5 0.957 1 2 2 1 6 9042800 9042800 0 16405 1316 17359 41681;41682;41683;41684;41685;41686 29404;29405 29405 2 328010 0 YVDEASKK IRQSISKALVAYYQKYVDEASKKEIKDILI LVAYYQKYVDEASKKEIKDILIQYDRTLLV K Y V K K E 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 1 1 0 0 8 1 938.47091 P62249 P62249 99 106 RPS16 40S ribosomal protein S16 yes yes 2;3 0.023166 127.46 By MS/MS By matching 10 0 3 2 1 4486800 4470900 15926 16406 1120 17360 41687;41688;41689 29406;29407 29407 2 4752100 408500 YVDGDLCPDGIR VRDGPQWRDGIIVLKYVDGDLCPDGIRKKS VLKYVDGDLCPDGIRKKSTTIRFTCSESQV K Y V I R K 0 1 0 3 1 0 0 2 0 1 1 0 0 0 1 0 0 0 1 1 0 0 12 0 1378.6187 P11717 P11717 1455 1466 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.0013655 129.16 By MS/MS 2.5 0.5 1 1 2 534890 534890 0 16407 557 17361 41690;41691 29408 29408 1 20890 0 YVDIAIPCNNK NLPTIALCNTDSPLRYVDIAIPCNNKGAHS SPLRYVDIAIPCNNKGAHSVGLMWWMLARE R Y V N K G 1 0 2 1 1 0 0 0 0 2 0 1 0 0 1 0 0 0 1 1 0 0 11 0 1305.6387 P08865 P08865 156 166 RPSA 40S ribosomal protein SA yes yes 2 0.0029001 131.62 By MS/MS By MS/MS 7.33 0.471 2 1 2 1 9138000 9138000 0 16408 509 17362 41692;41693;41694 29409;29410 29410 2 171130 0 YVDIGVLASDLQR KQRVIQYLTSNKCGKYVDIGVLASDLQRVY GKYVDIGVLASDLQRVYSIDYGRRKRNAFR K Y V Q R V 1 1 0 2 0 1 0 1 0 1 2 0 0 0 0 1 0 0 1 2 0 0 13 0 1447.7671 O15381 O15381 29 41 NVL Nuclear valosin-containing protein-like yes yes 2 9.5948E-08 155.33 By MS/MS 4 0 1 1 0 0 0 16409 174 17363 41695 29411 29411 1 0 0 YVECSALTQK PETAEKLARDLKAVKYVECSALTQKGLKNV LKAVKYVECSALTQKGLKNVFDEAILAALE K Y V Q K G 1 0 0 0 1 1 1 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 10 0 1197.57 P60953 P60953 154 163 CDC42 Cell division control protein 42 homolog yes yes 2 1.4799E-10 209.21 By MS/MS 9.5 0.5 1 1 2 2013700 2013700 0 16410 1078 17364 41696;41697 29412;29413 29412 2 1283800 0 YVENFGLIDGR SLDDSAKKVLLEKYKYVENFGLIDGRLTIC EKYKYVENFGLIDGRLTICTISCFFAIVAL K Y V G R L 0 1 1 1 0 0 1 2 0 1 1 0 0 1 0 0 0 0 1 1 0 0 11 0 1281.6354 Q15005 Q15005 74 84 SPCS2 Signal peptidase complex subunit 2 yes yes 2 0.00025535 152.69 By MS/MS 9.5 0.5 1 1 2 1544900 1544900 0 16411 1458 17365 41698;41699 29414 29414 1 910080 0 YVENPSQVLNCER KPLHLLDCIHVLLIRYVENPSQVLNCERRR IRYVENPSQVLNCERRRFTNLCLDAVCGYL R Y V E R R 0 1 2 0 1 1 2 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1606.741 O75694 O75694 1334 1346 NUP155 Nuclear pore complex protein Nup155 yes yes 2 9.6211E-35 259.18 By MS/MS 3 0 1 1 1090100 1090100 0 16412 324 17366 41700 29415 29415 1 28458 0 YVEPIEDVPCGNIVGLVGVDQFLVK LYLKPIQRTILMMGRYVEPIEDVPCGNIVG GNIVGLVGVDQFLVKTGTITTFEHAHNMRV R Y V V K T 0 0 1 2 1 1 2 3 0 2 2 1 0 1 2 0 0 0 1 6 0 0 25 0 2758.4252 P13639 P13639 457 481 EEF2 Elongation factor 2 yes yes 3 0.00050434 77.641 By MS/MS 6 0 1 1 974860 974860 0 16413 576 17367 41701 29416 29416 1 7601.9 0 YVETQAK GIDRYNPENLATLERYVETQAKENAYDLEA ENLATLERYVETQAKENAYDLEANLAVLKL R Y V A K E 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 7 0 837.42323 Q9UBQ5 Q9UBQ5 32 38 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 2 0.013663 143.85 By MS/MS By matching 9.33 0.471 2 1 2 1 8496700 8415400 81348 16414 2755 17368 41702;41703;41704 29417 29417 1 4864700 876700 YVFCTAPINK SAELIQHIPLSLRVRYVFCTAPINKKQPFV SLRVRYVFCTAPINKKQPFVCSSLLQFARQ R Y V N K K 1 0 1 0 1 0 0 0 0 1 0 1 0 1 1 0 1 0 1 1 0 0 10 0 1211.6009 Q8IYB8 Q8IYB8 572 581 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 2 0.00049521 145.16 By MS/MS 5 0 1 1 1563400 1563400 0 16415 1879 17369 41705 29418 29418 1 64263 0 YVGESEANIR AREPKVVNGPEILNKYVGESEANIRKLFAD EILNKYVGESEANIRKLFADAEEEQRRLGA K Y V I R K 1 1 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 10 0 1136.5462 P46459 P46459 294 303 NSF Vesicle-fusing ATPase yes yes 2 0.0067763 101.65 By MS/MS 5.5 1.12 1 1 1 1 4 11441000 11441000 0 16416 881 17370 41706;41707;41708;41709 29419 29419 1 407550 0 YVGESEANIRK AREPKVVNGPEILNKYVGESEANIRKLFAD ILNKYVGESEANIRKLFADAEEEQRRLGAN K Y V R K L 1 1 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 1 1 0 0 11 1 1264.6412 P46459 P46459 294 304 NSF Vesicle-fusing ATPase yes yes 2 0.00078305 154.85 By MS/MS 5 0 1 1 1087800 1087800 0 16417 881 17371 41710 29420 29420 1 44713 0 YVGETQPTGQIK AREILKQIEYRNLFKYVGETQPTGQIKIKR LFKYVGETQPTGQIKIKREDYESLPKEVAS K Y V I K I 0 0 0 0 0 2 1 2 0 1 0 1 0 0 1 0 2 0 1 1 0 0 12 0 1319.6721 Q9Y3Z3 Q9Y3Z3 456 467 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 2 1.2344E-05 164.97 By MS/MS 5 0 1 1 0 0 0 16418 2944 17372 41711 29421 29421 1 0 0 YVGKEPSGLR YAIAVNDLGTEYVHRYVGKEPSGLRFNKLF EYVHRYVGKEPSGLRFNKLFLNEDDKPHNP R Y V L R F 0 1 0 0 0 0 1 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 10 1 1104.5928 O94925 O94925 308 317 GLS Glutaminase kidney isoform, mitochondrial yes yes 3 0.037723 79.148 By MS/MS 6 0 1 1 3879000 3879000 0 16419 359 17373 41712 29422 29422 1 30249 0 YVLCTAPR LLIGDPSVAKSQLLRYVLCTAPRAIPTTGR AKSQLLRYVLCTAPRAIPTTGRGSSGVGLT R Y V P R A 1 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 1 1 0 0 8 0 978.49569 P25205 P25205 357 364 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.024314 98.997 By MS/MS 5 0.816 1 1 1 3 4129500 4129500 0 16420 683 17374 41713;41714;41715 29423 29423 1 99176 0 YVLDDLIVAK SDKMWLVRHLEIIRKYVLDDLIVAKNLMVQ EIIRKYVLDDLIVAKNLMVQCFPPHYEIFK K Y V A K N 1 0 0 2 0 0 0 0 0 1 2 1 0 0 0 0 0 0 1 2 0 0 10 0 1147.6489 O60645 O60645 285 294 EXOC3 Exocyst complex component 3 yes yes 2 0.001125 120.12 By MS/MS 5 0 1 1 795240 795240 0 16421 256 17375 41716 29424 29424 1 32688 0 YVLGMQELFR GSMAPWCSVSSGPSRYVLGMQELFRGHSKT SGPSRYVLGMQELFRGHSKTREFLAHSAKV R Y V F R G 0 1 0 0 0 1 1 1 0 0 2 0 1 1 0 0 0 0 1 1 0 0 10 0 1254.6431 Q96J01 Q96J01 34 43 THOC3 THO complex subunit 3 yes yes 2 0.0035409 106.88 By MS/MS 8 0 1 1 1002900 1002900 0 16422 2204 17376 41717 29425 29425 1407 1 66164 0 YVLNEEMSGLPAAR HWAEYIENYCLGTKKYVLNEEMSGLPAARK KYVLNEEMSGLPAARKHLNKLRNIRYGFNT K Y V A R K 2 1 1 0 0 0 2 1 0 0 2 0 1 0 1 1 0 0 1 1 0 0 14 0 1548.7606 Q8WVX9 Q8WVX9 444 457 FAR1 Fatty acyl-CoA reductase 1 yes yes 2 2.5537E-06 173.72 By MS/MS 1 0 1 1 212040 212040 0 16423 2036 17377 41718 29426 29426 1327 1 10360 0 YVLVAGITPTPLGEGK RLSVLERLKDQADGKYVLVAGITPTPLGEG VLVAGITPTPLGEGKSTVTIGLVQALTAHL K Y V G K S 1 0 0 0 0 0 1 3 0 1 2 1 0 0 2 0 2 0 1 2 0 0 16 0 1613.9029 Q6UB35 Q6UB35 414 429 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 6.1201E-15 208.33 By MS/MS 4.5 1.12 1 1 1 1 4 11072000 11072000 0 16424 1726 17378 41719;41720;41721;41722 29427;29428 29427 2 293130 0 YVMGNNPADLLAVDSR VATDLDTGRPSTTVRYVMGNNPADLLAVDS VMGNNPADLLAVDSRTGKLTLKNKVTKEQY R Y V S R T 2 1 2 2 0 0 0 1 0 0 2 0 1 0 1 1 0 0 1 2 0 0 16 0 1733.8407 Q02413 Q02413 423 438 DSG1 Desmoglein-1 yes yes 2 2.6286E-21 227.06 By MS/MS By MS/MS 5.91 3.03 1 1 1 1 1 1 1 1 1 2 2 9 1036400 434680 601710 16425 1253 17379 41723;41724;41725;41726;41727;41728;41729;41730;41731;41732;41733 29429;29430;29431;29432;29433;29434;29435;29436;29437;29438 29438 1015 10 329990 2212300 YVPGSSGSSNTLPTADPFTGAGR LGNPSFSDPFTGGGRYVPGSSGSSNTLPTA SNTLPTADPFTGAGRYVPGSASMGTTMAGV R Y V G R Y 2 1 1 1 0 0 0 4 0 0 1 0 0 1 3 4 3 0 1 1 0 0 23 0 2238.0553 Q9Y263 Q9Y263 477 499 PLAA Phospholipase A-2-activating protein yes yes 2 0.017064 61.265 By MS/MS 1.5 0.5 1 1 2 327530 327530 0 16426 2869 17380 41734;41735 29439 29439 1 16097 0 YVPLDQEAYSR IVKDPLFYLDAQKGRYVPLDQEAYSRIQAG QKGRYVPLDQEAYSRIQAGEEKL_______ R Y V S R I 1 1 0 1 0 1 1 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 11 0 1339.6408 Q6P1M0 Q6P1M0 625 635 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.0017249 129.89 By MS/MS 2 0.816 1 1 1 3 1389100 1389100 0 16427 1701 17381 41736;41737;41738 29440 29440 1 60234 0 YVQDFHPR ITVDPERDDVEAMARYVQDFHPRLLGLTGS DVEAMARYVQDFHPRLLGLTGSTKQVAQAS R Y V P R L 0 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 8 0 1060.509 O43819 O43819 180 187 SCO2 Protein SCO2 homolog, mitochondrial yes yes 2 0.015297 112.84 By MS/MS 8 0 1 1 2955200 2955200 0 16428 226 17382 41739 29441 29441 1 194960 0 YVQLPADEVDTQLLQDAAR MLSVKNCFIRGSVVRYVQLPADEVDTQLLQ PADEVDTQLLQDAARKEALQQKQ_______ R Y V A R K 3 1 0 3 0 3 1 0 0 0 3 0 0 0 1 0 1 0 1 2 0 0 19 0 2144.075 Q9Y333 Q9Y333 69 87 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 2 0.0012553 109.07 By MS/MS 10 0 1 1 158050 158050 0 16429 2913 17383 41740 29442 29442 1 167990 0 YVSAQPLAGR VVEDLLYVLVGVDGRYVSAQPLAGRQSRTF GVDGRYVSAQPLAGRQSRTFLVDPNLDLSI R Y V G R Q 2 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1060.5665 Q9BSJ2 Q9BSJ2 232 241 TUBGCP2 Gamma-tubulin complex component 2 yes yes 2 0.00054942 143.03 By MS/MS 4 0 1 1 2197200 2197200 0 16430 2338 17384 41741 29443 29443 1 59980 0 YVVGLIIK RWKILPRNQCEGIKKYVVGLIIKTSSDPTC QCEGIKKYVVGLIIKTSSDPTCVEKEKVYI K Y V I K T 0 0 0 0 0 0 0 1 0 2 1 1 0 0 0 0 0 0 1 2 0 0 8 0 903.57934 O14980 O14980 105 112 XPO1 Exportin-1 yes yes 2 0.03825 95.957 By MS/MS 4 0 1 1 347390 347390 0 16431 142 17385 41742 29444 29444 1 9483.2 0 YVVNHLGR GIVATVFGATGFLGRYVVNHLGRMGSQVII ATGFLGRYVVNHLGRMGSQVIIPYRCDKYD R Y V G R M 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 2 0 0 8 0 956.5192 Q16795 Q16795 68 75 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes yes 3 0.034422 102.71 By MS/MS 7.5 0.5 1 1 2 2123700 2123700 0 16432 1548 17386 41743;41744 29445 29445 1 124610 0 YVVVTGITPTPLGEGK LLSALERLKHRPDGKYVVVTGITPTPLGEG VVVTGITPTPLGEGKSTTTIGLVQALGAHL K Y V G K S 0 0 0 0 0 0 1 3 0 1 1 1 0 0 2 0 3 0 1 3 0 0 16 0 1629.8978 P11586 P11586 371 386 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 2 1.8626E-10 189.24 By MS/MS 3.5 1.71 1 1 1 1 1 1 6 25939000 25939000 0 16433 556 17387 41745;41746;41747;41748;41749;41750 29446;29447 29446 2 698280 0 YVYNYEAESSSGVPGTADSR PSCPKDAVRFKHLRKYVYNYEAESSSGVPG EAESSSGVPGTADSRSATKINCKVELEVPQ K Y V S R S 2 1 1 1 0 0 2 2 0 0 0 0 0 0 1 4 1 0 3 2 0 0 20 0 2150.9393 CON__ENSEMBL:ENSBTAP00000032840 CON__ENSEMBL:ENSBTAP00000032840 49 68 yes yes 2 0.00057451 110.35 By MS/MS 2 0.816 1 1 1 3 763930 763930 0 + 16434 31 17388 41751;41752;41753 29448 29448 1 30299 0 YVYQTEGIR KVRGSKQMNTLQCARYVYQTEGIRGFYRGL TLQCARYVYQTEGIRGFYRGLTASYAGISE R Y V I R G 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 1 0 2 1 0 0 9 0 1127.5611 Q9BSK2 Q9BSK2 176 184 SLC25A33 Solute carrier family 25 member 33 yes yes 2 0.00025155 168.26 By MS/MS 8 0 1 1 982210 982210 0 16435 2340 17389 41754 29449 29449 1 64796 0 YWLAQQAAK MSVVNFEKPKTKRYKYWLAQQAAKAMAPTS KTKRYKYWLAQQAAKAMAPTSPQI______ K Y W A K A 3 0 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 9 0 1077.5607 Q9BYD2 Q9BYD2 250 258 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 2 0.0021827 127.84 By MS/MS 8 0 1 1 1252400 1252400 0 16436 2413 17390 41755 29450 29450 1 82619 0 YWLCAATGPSIK DGGDIINALCFSPNRYWLCAATGPSIKIWD PNRYWLCAATGPSIKIWDLEGKIIVDELKQ R Y W I K I 2 0 0 0 1 0 0 1 0 1 1 1 0 0 1 1 1 1 1 0 0 0 12 0 1365.6751 P63244 P63244 246 257 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 2 4.4874E-11 205.14 By MS/MS 8 0 1 1 1032800 1032800 0 16437 1178 17391 41756 29451 29451 1 68131 0 YWLEEAECR DIPEKQPFKDLGNLRYWLEEAECRDQYSVI DLGNLRYWLEEAECRDQYSVIFESGDRTSI R Y W C R D 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 9 0 1254.5339 P55884 P55884 295 303 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 2 0.0025183 124.23 By MS/MS 4 0.816 1 1 1 3 2521800 2521800 0 16438 1040 17392 41757;41758;41759 29452 29452 1 73286 0 YYAFDEAFVR IFQIPPSRQALLIERYYAFDEAFVREVLGK LLIERYYAFDEAFVREVLGKKLSKGTKKDL R Y Y V R E 2 1 0 1 0 0 1 0 0 0 0 0 0 2 0 0 0 0 2 1 0 0 10 0 1279.5873 O43427 O43427 96 105 FIBP Acidic fibroblast growth factor intracellular-binding protein yes yes 2 0.00033463 151.44 By MS/MS 7 0 1 1 347810 347810 0 16439 199 17393 41760 29453 29453 1 6215.4 0 YYASEIAGQTTSK LEAGKPFIKEASMAKYYASEIAGQTTSKCI AKYYASEIAGQTTSKCIEWMGGVGYTKDYP K Y Y S K C 2 0 0 0 0 1 1 1 0 1 0 1 0 0 0 2 2 0 2 0 0 0 13 0 1417.6725 P45954 P45954 372 384 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 2 7.2399E-35 262.07 By MS/MS 7 0 1 1 9724600 9724600 0 16440 871 17394 41761 29454 29454 1 173780 0 YYAVNYPLR PGTGDLRDIGAGKGKYYAVNYPLRDGIDDE GAGKGKYYAVNYPLRDGIDDESYEAIFKPV K Y Y L R D 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 9 0 1157.5869 Q13547 Q13547 221 229 HDAC1 Histone deacetylase 1 yes yes 2 0.0044669 116.88 By MS/MS 6 0 1 1 3006400 3006400 0 16441 1380 17395 41762 29455 29455 1 23444 0 YYDDTYPSVK AILILDNDGDRLFAKYYDDTYPSVKEQKAF RLFAKYYDDTYPSVKEQKAFEKNIFNKTHR K Y Y V K E 0 0 0 2 0 0 0 0 0 0 0 1 0 0 1 1 1 0 3 1 0 0 10 0 1249.5503 P61923 P61923 30 39 COPZ1 Coatomer subunit zeta-1 yes yes 2 9.6016E-05 166.09 By MS/MS 9.5 0.5 1 1 2 5752100 5752100 0 16442 1107 17396 41763;41764 29456;29457 29456 2 3631100 0 YYDDTYPSVKEQK AILILDNDGDRLFAKYYDDTYPSVKEQKAF AKYYDDTYPSVKEQKAFEKNIFNKTHRTDS K Y Y Q K A 0 0 0 2 0 1 1 0 0 0 0 2 0 0 1 1 1 0 3 1 0 0 13 1 1634.7464 P61923 P61923 30 42 COPZ1 Coatomer subunit zeta-1 yes yes 2 0.00019567 167.12 By MS/MS 9 0 1 1 547960 547960 0 16443 1107 17397 41765 29458 29458 1 314480 0 YYEQDLALAK GYAHYCLGNYQEAVKYYEQDLALAKDLHDK QEAVKYYEQDLALAKDLHDKLSQAKAYCNL K Y Y A K D 2 0 0 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 2 0 0 0 10 0 1212.6027 Q96AY4 Q96AY4 656 665 TTC28 Tetratricopeptide repeat protein 28 yes yes 2 0.0050756 107.21 By MS/MS 2 0 1 1 192330 192330 0 16444 2125 17398 41766 29459 29459 1 9559.6 0 YYKVDENGK KNKHKRKKVKLAVLKYYKVDENGKISRLRR KLAVLKYYKVDENGKISRLRRECPSDECGA K Y Y G K I 0 0 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 2 1 0 0 9 1 1114.5295 P62979 P62979 105 113 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 3 0.00083592 131.62 By MS/MS By matching 10 0 2 1 1 889240 869750 19486 16445 1165 17399 41767;41768 29460 29460 1 924450 499810 YYLAPKIEDEEGS PLVVEYKIADMGHLKYYLAPKIEDEEGS__ LKYYLAPKIEDEEGS_______________ K Y Y G S - 1 0 0 1 0 0 3 1 0 1 1 1 0 0 1 1 0 0 2 0 0 0 13 1 1512.6984 P12004 P12004 249 261 PCNA Proliferating cell nuclear antigen yes yes 2 0.00040742 157.75 By MS/MS 8 0 1 1 2140900 2140900 0 16446 561 17400 41769 29461 29461 1 141230 0 YYNKYINVK SPSGIFGAFQRGYYRYYNKYINVKKGSISG QRGYYRYYNKYINVKKGSISGITMVLACYV R Y Y V K K 0 0 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 3 1 0 0 9 1 1203.6288 P56134 P56134 51 59 ATP5J2 ATP synthase subunit f, mitochondrial yes yes 2 0.018974 123.69 By MS/MS 10 0 1 1 470080 470080 0 16447 1041 17401 41770 29462 29462 1 499640 0 YYNQVGR YSCSTTGSSLNAIYRYYNQVGRKPTMKWST SSLNAIYRYYNQVGRKPTMKWSTIDRWPTH R Y Y G R K 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0 7 0 898.42972 P22830 P22830 209 215 FECH Ferrochelatase, mitochondrial yes yes 2 0.010124 153.67 By MS/MS 7 0 1 1 3772400 3772400 0 16448 663 17402 41771 29463 29463 1 67413 0 YYNSDVHR VQPLTQQQVAQMQLKYYNSDVHRAAFVLPE VAQMQLKYYNSDVHRAAFVLPEFARKALND K Y Y H R A 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 2 1 0 0 8 0 1052.4676 P19623 P19623 278 285 SRM Spermidine synthase yes yes 2 0.0056149 134.81 By MS/MS 8 0 1 1 1222400 1222400 0 16449 635 17403 41772 29464 29464 1 80642 0 YYTEFPTVLDITAEDPSK QGQGHGAQLLETVHRYYTEFPTVLDITAED EFPTVLDITAEDPSKSYVKLRDFVLVKLCQ R Y Y S K S 1 0 0 2 0 0 2 0 0 1 1 1 0 1 2 1 3 0 2 1 0 0 18 0 2087.9939 O14929 O14929 263 280 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.0071455 90.367 By MS/MS 6.5 0.5 1 1 2 1076700 1076700 0 16450 134 17404 41773;41774 29465 29465 1 11405 0 YYTGNYDQYVK GVCTNIIHMHNKKLKYYTGNYDQYVKTRLE KKLKYYTGNYDQYVKTRLELEENQMKRFHW K Y Y V K T 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 1 0 4 1 0 0 11 0 1412.6248 Q9UG63 Q9UG63 305 315 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 3.3996E-11 210.64 By MS/MS 5 0 1 1 3342300 3342300 0 16451 2771 17405 41775 29466 29466 1 137380 0 YYTLFGR LQPGAKCVCGKNPAKYYTLFGRSY______ VCGKNPAKYYTLFGRSY_____________ K Y Y G R S 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 2 0 0 0 7 0 918.45995 P07814 P07814 1504 1510 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.0076315 164.1 By MS/MS 4.5 1.12 1 1 1 1 4 3240400 3240400 0 16452 493 17406 41776;41777;41778;41779 29467 29467 1 80777 0 YYVTIIDAPGHR GITIDISLWKFETSKYYVTIIDAPGHRDFI TSKYYVTIIDAPGHRDFIKNMITGTSQADC K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 Q5VTE0;P68104 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 6.3034E-05 163.16 By MS/MS 5.73 2.86 2 1 1 2 2 1 1 1 11 59169000 59169000 0 16453 1184 17407 41780;41781;41782;41783;41784;41785;41786;41787;41788;41789;41790 29468;29469;29470;29471;29472;29473;29474;29475 29474 7 1267400 0