Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS submitted	MS/MS submitted (SIL)	MS/MS submitted (ISO)	MS/MS submitted (PEAK)	MS/MS identified	MS/MS identified (SIL)	MS/MS identified (ISO)	MS/MS identified (PEAK)	MS/MS identified [%]	MS/MS identified (SIL) [%]	MS/MS identified (ISO) [%]	MS/MS identified (PEAK) [%]	Peptide sequences identified	Peaks	Peaks sequenced	Peaks sequenced [%]	Peaks repeatedly sequenced	Peaks repeatedly sequenced [%]	Isotope patterns	Isotope patterns sequenced	Isotope patterns sequenced (z>1)	Isotope patterns sequenced [%]	Isotope patterns sequenced (z>1) [%]	Isotope patterns repeatedly sequenced	Isotope patterns repeatedly sequenced [%]	Recalibrated	Av. absolute mass deviation [ppm]	Mass standard deviation [ppm]	Av. absolute mass deviation [mDa]	Mass standard deviation [mDa]
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP343	1_#20_013_PAP343	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5405	23471	0	27052	19888	0	7164	1142	977	0	165	4.2	4.9	0	2.3	361	537151	21084	3.9	1182	5.6	70246	17725	17245	25	33	1593	9	+	0.37362	0.52845	0.22489	0.32243
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP344	1_#20_013_PAP344	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5840	29234	0	34070	24398	0	9672	1220	975	0	245	3.6	4	0	2.5	204	619485	25608	4.1	1379	5.4	79781	20854	20536	26	30	1985	9.5	+	0.46738	0.6116	0.32702	0.46157
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP345	1_#20_013_PAP345	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5925	30342	0	34881	25803	0	9078	1425	1240	0	185	4.1	4.8	0	2	247	600816	26661	4.4	1384	5.2	79110	21964	21734	28	32	2028	9.2	+	0.43125	0.56153	0.30869	0.43469
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP346	1_#20_013_PAP346	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		6162	22885	0	27479	18291	0	9188	747	641	0	106	2.7	3.5	0	1.2	220	623872	19921	3.2	1388	7	72489	15824	15072	22	31	1753	11	+	0.41587	0.5726	0.24345	0.34535
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP347	1_#20_013_PAP347	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5981	30745	0	35671	25819	0	9852	1363	1088	0	275	3.8	4.2	0	2.8	205	608524	26815	4.4	1528	5.7	79142	21775	21467	28	31	2205	10	+	0.48199	0.62729	0.34948	0.49062
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP348	1_#20_013_PAP348	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5251	25652	0	29565	21739	0	7826	656	614	0	42	2.2	2.8	0	0.54	309	567866	22551	4	1552	6.9	72566	18547	17975	26	31	2049	11	+	0.41826	0.57338	0.26858	0.37005
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP349	1_#20_013_PAP349	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5632	30675	0	35546	25804	0	9742	1182	970	0	212	3.3	3.8	0	2.2	173	610842	26737	4.4	1436	5.4	79546	21797	21529	27	31	2065	9.5	+	0.54624	0.72487	0.40958	0.58991
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP350	1_#20_013_PAP350	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5963	22579	0	26655	18503	0	8152	1219	987	0	232	4.6	5.3	0	2.8	346	550704	19548	3.5	1306	6.7	66469	15904	15388	24	34	1665	10	+	0.43737	0.57488	0.26176	0.35997
200227_C20_004_QHF1_PTM_Rev01_#20_013_PAP351	1_#20_013_PAP351	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5708	30286	0	35282	25290	0	9992	1555	1328	0	227	4.4	5.3	0	2.3	249	597637	26102	4.4	1600	6.1	80345	21272	20928	26	31	2050	9.6	+	0.43963	0.60481	0.30631	0.45155
200227_C20_004_QHF1_PTM_Rev04_#20_013_PAP347	4_#20_013_PAP347	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5910	29915	0	34159	25671	0	8488	1169	966	0	203	3.4	3.8	0	2.4	207	539634	26543	4.9	1306	4.9	75833	22180	21986	29	32	1925	8.7	+	0.43456	0.56201	0.30618	0.42433
200227_C20_004_QHF1_PTM_Rev04_#20_013_PAP351	4_#20_013_PAP351	Trypsin/P	Specific	Trypsin/P	Specific	True	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			True	False	1	4		Standard		5829	28620	0	33172	24068	0	9104	1536	1291	0	245	4.6	5.4	0	2.7	264	498997	25014	5	1334	5.3	68721	20525	20280	30	33	1876	9.1	+	0.4787	0.64459	0.33732	0.48365
Total																		63606	304404	0	353532	255274	0	98258	13214	11077	0	2137	3.7	4.3	0	2.2	594	6355528					824248	218367	214140	26	32	21194	9.7		0.44382	0.5968	0.29946	0.4304