Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
20211206conAw1	conAw1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9804	25064	0	31249	18879	0	12370	1537	1495	0	42	4.9	7.9	0	0.34	1177	664583	21459	3.2	1494	7	74451	15917	15187	21	34	2313	15	+	0.66969	0.93588	0.42385	0.61064	
20211206conAw2	conAw2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9627	25409	0	31617	19201	0	12416	1422	1390	0	32	4.5	7.2	0	0.26	1090	700748	21739	3.1	1499	6.9	78606	16249	15474	21	33	2359	15	+	0.61845	0.86136	0.38502	0.54731	
20211206conAw3	conAw3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9503	25493	0	32003	18981	0	13022	1233	1206	0	27	3.9	6.4	0	0.21	904	705726	21499	3	1574	7.3	76434	15809	15016	21	33	2418	15	+	0.61262	0.87221	0.37705	0.5473	
20211206Exo	Exo1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		8475	35528	0	39361	31695	0	7666	15942	15478	0	464	41	49	0	6.1	12139	1082119	32874	3	1321	4	147697	28877	28456	20	24	2176	7.5	+	0.64383	0.93991	0.44065	0.67166	
20211206Exo_20211206123155	Exo2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		8829	32872	0	36269	29475	0	6794	14968	14534	0	434	41	49	0	6.4	11367	964050	30262	3.1	1404	4.6	119498	26484	26077	22	25	2313	8.7	+	0.64997	0.94334	0.44689	0.68278	
20211206Exo_20211206142327	Exo3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		8543	33240	0	37053	29427	0	7626	14279	13853	0	426	39	47	0	5.6	10932	907999	30549	3.4	1363	4.5	118768	26709	26314	22	26	2139	8	+	0.65324	0.94958	0.44582	0.67609	
20211206SSAwa1	SSAw1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		8894	27865	0	34562	21168	0	13394	3038	2884	0	154	8.8	14	0	1.1	2092	651296	23690	3.6	1558	6.6	81995	18163	17275	22	30	2330	13	+	0.71937	1.0144	0.45371	0.65607	
20211206SSAwa2	SSAw2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9524	25398	0	30928	19868	0	11060	2499	2432	0	67	8.1	12	0	0.61	1904	645708	21860	3.4	1453	6.6	74051	16854	16046	23	32	2295	14	+	0.68576	0.9732	0.43543	0.64025	
20211206SSAwa3	SSAw3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9211	26343	0	32477	20209	0	12268	2313	2238	0	75	7.1	11	0	0.61	1776	643705	22502	3.5	1566	7	73742	17083	16279	23	34	2404	14	+	0.68339	0.98726	0.4247	0.62781	
20211207conAexel1	conAel1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		12207	16322	0	20622	12022	0	8600	518	510	0	8	2.5	4.2	0	0.093	368	883696	14140	1.6	828	5.9	77769	10287	9435	13	24	1244	12	+	0.58566	0.80189	0.33069	0.45344	
20211207conAexel2	conAel2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		12157	16858	0	21370	12346	0	9024	421	412	0	9	2	3.3	0	0.1	315	918615	14743	1.6	774	5.2	89959	10723	9900	12	24	1223	11	+	0.52079	0.72946	0.2973	0.4248	
20211207conAexel3	conAel3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		12200	16678	0	21091	12263	0	8828	399	385	0	14	1.9	3.1	0	0.16	294	806065	14605	1.8	749	5.1	73470	10618	9861	14	27	1207	11	+	0.50416	0.70542	0.28958	0.41021	
20211207conAexth1	conAth1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9868	26176	0	29871	22481	0	7390	10406	10055	0	351	35	45	0	4.7	8944	929532	24348	2.6	841	3.5	119669	20876	20315	17	23	1244	6	+	0.64158	0.9355	0.39529	0.59343	
20211207conAexth2	conAth2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9935	25669	0	29089	22249	0	6840	10313	10011	0	302	35	45	0	4.4	8957	984893	24113	2.4	761	3.2	129565	20798	20250	16	22	1187	5.7	+	0.62634	0.91756	0.38355	0.58085	
20211207conAexth3	conAth3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		10059	24391	0	27292	21490	0	5802	9748	9443	0	305	36	44	0	5.3	8428	928833	22988	2.5	752	3.3	113778	20050	19533	18	23	1164	5.8	+	0.62973	0.92236	0.38524	0.57988	
20211207SSAexel1	SSAel1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		11203	20227	0	25884	14570	0	11314	695	668	0	27	2.7	4.6	0	0.24	453	918094	17063	1.9	1107	6.5	93276	12292	11498	13	27	1610	13	+	0.60792	0.83592	0.35341	0.52822	
20211207SSAexel2	SSAel2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		11428	19638	0	24877	14399	0	10478	679	664	0	15	2.7	4.6	0	0.14	461	858630	16841	2	1012	6	84395	12312	11524	15	27	1492	12	+	0.559	0.80508	0.32513	0.49586	
20211207SSAexel3	SSAel3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		11258	19633	0	24449	14817	0	9632	676	667	0	9	2.8	4.5	0	0.093	448	880739	17154	1.9	984	5.7	92536	12855	12058	14	27	1474	11	+	0.53468	0.72618	0.30413	0.42018	
20211207SSAexth1	SSAth1	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9417	27488	0	31575	23401	0	8174	9410	9143	0	267	30	39	0	3.3	8152	773146	24914	3.2	1086	4.4	107857	21205	20816	20	24	1515	7.1	+	0.62438	0.91103	0.40057	0.60186	
20211207SSAexth2	SSAth2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9344	28348	0	32484	24212	0	8272	10272	9974	0	298	32	41	0	3.6	8966	873546	25989	3	928	3.6	120956	22275	21845	18	24	1383	6.2	+	0.62803	0.92845	0.4042	0.61868	
20211207SSAexth3	SSAth3	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		9806	25865	0	29613	22117	0	7496	9002	8761	0	241	30	40	0	3.2	7870	808785	23940	3	786	3.3	107793	20485	20059	19	24	1251	6.1	+	0.61422	0.90716	0.39138	0.59603	
Total																		211292	524505	0	623736	425270	0	198466	119770	116203	0	3567	19	27	0	1.8	23814	17530508					2056265	376921	363218	18	26	36741	9.7		0.63813	0.92949	0.4131	0.62564