MTD mzTab-version 1.0 MTD mzTab-mode Complete MTD mzTab-type Identification MTD description JPST000208 -- new MTD ms_run[1]-location D:\JobRequest\ResultFiles\20220618\20220618002634800212^fe80..dc7a.184c.1632.7be4^jpost@jpost.jpost\PeakList.MaxQuantPlist1\111222_HL24.maxq.txt MTD ms_run[2]-location D:\JobRequest\ResultFiles\20220618\20220618002634800212^fe80..dc7a.184c.1632.7be4^jpost@jpost.jpost\Psearch.MaxQuantExec1\111222_HL24.maxqFin.txt MTD software[1] [MS, MS:1001583, MaxQuant, 1.6.17.0] MTD software[1]-setting Taxon=userFasta.sprot_human_20200318 MTD software[1]-setting enzymes=Trypsin/P MTD software[1]-setting enzymeMode=0 MTD software[1]-setting fixedModifications=Carbamidomethyl (C) MTD software[1]-setting variableModifications=Acetyl (Protein N-term),Label:13C(6) (K),Label:13C(6)15N(4) (R),Oxidation (M) MTD software[1]-setting maxMissedCleavages=1 MTD software[1]-setting lcmsRunType=Standard MTD software[1]-setting firstSearchTol=40 MTD software[1]-setting mainSearchTol=4.5 MTD software[2] [MS, MS:1001476, X!Tandem, 2015.04.01.1] MTD software[2]-setting DB=userFasta.sprot_human_20200318 MTD software[2]-setting CLE=[RK]|{} MTD software[2]-setting MODS=Carbamidomethyl (C) MTD software[2]-setting IT_MODS=Oxidation (M),Label:13C(6) (K),Label:13C(6)15N(4) (R),Acetyl (Protein N-term) MTD software[2]-setting TOL(-)=20 MTD software[2]-setting TOL(+)=20 MTD software[2]-setting TOLU=ppm MTD software[2]-setting ITOL=1000 MTD software[2]-setting ITOLU=ppm MTD software[2]-setting PEP_ISOTOPE_ERROR=yes MTD software[2]-setting PFA=1 MTD software[3] [MS, MS:1002251, Comet, 2019.01 rev. 5] MTD software[3]-setting Taxon=userFasta.sprot_human_20200318 MTD software[3]-setting search_enzyme_number=2 MTD software[3]-setting FixMod=Carbamidomethyl (C) MTD software[3]-setting VarMod=Acetyl (Protein N-term),Label:13C(6) (K),Label:13C(6)15N(4) (R),Oxidation (M) MTD software[3]-setting max_variable_mods_in_peptide=5 MTD software[3]-setting allowed_missed_cleavage=1 MTD software[3]-setting peptide_mass_tolerance=20 MTD software[3]-setting peptide_mass_units=2 MTD software[3]-setting fragment_bin_tol=1.0005 MTD software[3]-setting fragment_bin_offset=0.4 MTD fixed_mod[1] [UNIMOD, UNIMOD:4, Carbamidomethyl,] MTD fixed_mod[1]-site C MTD fixed_mod[1]-position Anywhere MTD variable_mod[1] [UNIMOD, UNIMOD:1, Acetyl,] MTD variable_mod[1]-site N-term MTD variable_mod[1]-position Protein N-term MTD variable_mod[2] [UNIMOD, UNIMOD:188, Label:13C(6),] MTD variable_mod[2]-site K MTD variable_mod[2]-position Anywhere MTD variable_mod[3] [UNIMOD, UNIMOD:267, Label:13C(6)15N(4),] MTD variable_mod[3]-site R MTD variable_mod[3]-position Anywhere MTD variable_mod[4] [UNIMOD, UNIMOD:35, Oxidation,] MTD variable_mod[4]-site M MTD variable_mod[4]-position Anywhere MTD protein_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] MTD psm_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] PRH accession description taxid species database database_version search_engine best_search_engine_score[1] ambiguity_members modifications protein_coverage search_engine_score[1]_ms_run[1] num_psms_ms_run[1] num_peptides_distinct_ms_run[1] num_peptides_unique_ms_run[1] PRT sp|P06454-2|PTMA_HUMAN Isoform 2 of Prothymosin alpha OS=Homo sapiens OX=9606 GN=PTMA null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 34.0 null 2-UNIMOD:1,15-UNIMOD:188 0.14 34.0 7 1 0 PRT sp|Q71U36|TBA1A_HUMAN Tubulin alpha-1A chain OS=Homo sapiens OX=9606 GN=TUBA1A PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ],[MS, MS:1001476, X!Tandem, ] 31.0 null 85-UNIMOD:28 0.10 31.0 2 2 1 PRT sp|Q86VP6-2|CAND1_HUMAN Isoform 2 of Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens OX=9606 GN=CAND1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 null 0.01 28.0 1 1 1 PRT sp|P68363-2|TBA1B_HUMAN Isoform 2 of Tubulin alpha-1B chain OS=Homo sapiens OX=9606 GN=TUBA1B null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 26.0 null 0.07 26.0 1 1 0 PRT sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Homo sapiens OX=9606 GN=PA2G4 PE=1 SV=3 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ],[MS, MS:1002251, Comet, ] 26.0 null 2-UNIMOD:1,20-UNIMOD:188 0.10 26.0 5 2 0 PRT sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 OS=Homo sapiens OX=9606 GN=ACTB PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 24.0 null 2-UNIMOD:1,17-UNIMOD:4,18-UNIMOD:188,16-UNIMOD:35 0.05 24.0 2 1 0 PRT sp|P28288|ABCD3_HUMAN ATP-binding cassette sub-family D member 3 OS=Homo sapiens OX=9606 GN=ABCD3 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 24.0 null 649-UNIMOD:28 0.02 24.0 1 1 1 PRT sp|Q9BTT0-3|AN32E_HUMAN Isoform 3 of Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Homo sapiens OX=9606 GN=ANP32E null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 null 0.05 23.0 1 1 1 PRT sp|P08727|K1C19_HUMAN Keratin, type I cytoskeletal 19 OS=Homo sapiens OX=9606 GN=KRT19 PE=1 SV=4 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 20.0 null 0.04 20.0 1 1 1 PRT sp|Q15020-3|SART3_HUMAN Isoform 3 of Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens OX=9606 GN=SART3 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 20.0 null 2-UNIMOD:1,17-UNIMOD:188 0.13 20.0 2 1 0 PRT sp|Q96I15|SCLY_HUMAN Selenocysteine lyase OS=Homo sapiens OX=9606 GN=SCLY PE=1 SV=4 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 19.0 null 436-UNIMOD:28 0.02 19.0 1 1 1 PRT sp|Q13838|DX39B_HUMAN Spliceosome RNA helicase DDX39B OS=Homo sapiens OX=9606 GN=DDX39B PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 null 2-UNIMOD:1 0.07 18.0 1 1 1 PRT sp|Q9NSI2|F207A_HUMAN Protein FAM207A OS=Homo sapiens OX=9606 GN=FAM207A PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 17.0 null 221-UNIMOD:28 0.05 17.0 1 1 1 PSH sequence PSM_ID accession unique database database_version search_engine search_engine_score[1] modifications spectra_ref retention_time charge exp_mass_to_charge calc_mass_to_charge pre post start end PSM SDAAVDTSSEITTK 1 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 34.0 1-UNIMOD:1 ms_run[2]:scan=3234 33.848 2 1465.6784 1465.6784 M D 2 16 PSM SDAAVDTSSEITTK 2 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 32.0 1-UNIMOD:1,14-UNIMOD:188 ms_run[2]:scan=3236 33.864 2 1471.6985 1471.6985 M D 2 16 PSM DYEEVGVDSVEGEGEEEGEEY 3 sp|Q71U36|TBA1A_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 31.0 ms_run[1]:scan=4674 50.63810333333333 2 2347.896154 2347.897571 K - 431 452 PSM DSSSTNLESMDTS 4 sp|Q86VP6-2|CAND1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 ms_run[2]:scan=2992 31.063 2 1372.53 1372.5300 K - 1050 1063 PSM DYEEVGVDSVEGEGEEEGEEY 5 sp|P68363-2|TBA1B_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 26.0 ms_run[2]:scan=4680 50.697 3 2347.8976 2347.8976 K - 315 336 PSM SGEDEQQEQTIAEDLVVTK 6 sp|Q9UQ80|PA2G4_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 26.0 1-UNIMOD:1,19-UNIMOD:188 ms_run[2]:scan=5644 60.801 3 2166.0271 2166.0271 M Y 2 21 PSM DDDIAALVVDNGSGMCK 7 sp|P60709|ACTB_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 24.0 1-UNIMOD:1,16-UNIMOD:4,17-UNIMOD:188 ms_run[1]:scan=6152 66.327745 2 1827.7952 1826.8112 M A 2 19 PSM QITEDTVEFGS 8 sp|P28288|ABCD3_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 24.0 1-UNIMOD:28 ms_run[1]:scan=5179 56.170406666666665 2 1207.5246 1207.5239 K - 649 660 PSM DAEDDGEEEDD 9 sp|Q9BTT0-3|AN32E_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 ms_run[2]:scan=565 6.6848 2 1237.3742 1237.3742 R - 210 221 PSM SDAAVDTSSEITTK 10 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 1-UNIMOD:1,14-UNIMOD:188 ms_run[2]:scan=2658 27.157 2 1471.6985 1471.6985 M D 2 16 PSM AALEDTLAETEAR 11 sp|P08727|K1C19_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 20.0 ms_run[2]:scan=3992 42.686 2 1388.6783 1388.6783 K F 318 331 PSM ATAAETSASEPEAESK 12 sp|Q15020-3|SART3_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 20.0 1-UNIMOD:1,16-UNIMOD:188 ms_run[2]:scan=2385 23.964 2 1625.7364 1625.7364 M A 2 18 PSM SDAAVDTSSEITTK 13 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 20.0 1-UNIMOD:1 ms_run[2]:scan=2921 30.191 2 1465.6784 1465.6784 M D 2 16 PSM SGEDEQQEQTIAEDLVVTK 14 sp|Q9UQ80|PA2G4_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 20.0 1-UNIMOD:1,19-UNIMOD:188 ms_run[2]:scan=5640 60.761 2 2166.0271 2166.0271 M Y 2 21 PSM TAENATSGETLEENEAGD 15 sp|Q9UQ80|PA2G4_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 20.0 ms_run[1]:scan=2679 27.416478333333334 2 1837.733352 1836.749725 K - 377 395 PSM QAVAQLEDQA 16 sp|Q96I15|SCLY_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 19.0 1-UNIMOD:28 ms_run[1]:scan=4123 44.275823333333335 2 1054.4928 1054.4926 K - 436 446 PSM AENDVDNELLDYEDDEVETAAGGDGAEAPAK 17 sp|Q13838|DX39B_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 1-UNIMOD:1 ms_run[2]:scan=6291 67.928 3 3263.375 3263.3750 M K 2 33 PSM ATAAETSASEPEAESK 18 sp|Q15020-3|SART3_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 1-UNIMOD:1 ms_run[2]:scan=2382 23.942 2 1619.7162 1619.7162 M A 2 18 PSM SDAAVDTSSEITTK 19 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 14-UNIMOD:188 ms_run[2]:scan=2441 24.623 2 1429.688 1429.6880 M D 2 16 PSM SDAAVDTSSEITTK 20 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 1-UNIMOD:1 ms_run[2]:scan=2475 24.976 2 1465.6784 1465.6784 M D 2 16 PSM SGEDEQQEQTIAEDLVVTK 21 sp|Q9UQ80|PA2G4_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 1-UNIMOD:1 ms_run[2]:scan=5638 60.744 2 2160.007 2160.0070 M Y 2 21 PSM TAENATSGETLEENEAGD 22 sp|Q9UQ80|PA2G4_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 18.0 ms_run[2]:scan=2665 27.243 2 1836.7497 1836.7497 K - 377 395 PSM SDAAVDTSSEITTK 23 sp|P06454-2|PTMA_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 17.0 ms_run[2]:scan=2434 24.548 2 1423.6678 1423.6678 M D 2 16 PSM QLFHPEQLITGKEDAANNYAR 24 sp|Q71U36|TBA1A_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 17.0 1-UNIMOD:28 ms_run[1]:scan=5670 61.07824833333333 3 2398.1732 2397.1712 R G 85 106 PSM DDDIAALVVDNGSGMCK 25 sp|P60709|ACTB_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 17.0 1-UNIMOD:1,15-UNIMOD:35,16-UNIMOD:4,17-UNIMOD:188 ms_run[1]:scan=5655 60.902318333333334 2 1843.7902 1842.8062 M A 2 19 PSM QMQLEDGGQL 26 sp|Q9NSI2|F207A_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001476, X!Tandem, ] 17.0 1-UNIMOD:28 ms_run[1]:scan=5248 56.784306666666666 2 1100.4803 1100.4803 R - 221 231