Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS submitted	MS/MS submitted (SIL)	MS/MS submitted (ISO)	MS/MS submitted (PEAK)	MS/MS identified	MS/MS identified (SIL)	MS/MS identified (ISO)	MS/MS identified (PEAK)	MS/MS identified [%]	MS/MS identified (SIL) [%]	MS/MS identified (ISO) [%]	MS/MS identified (PEAK) [%]	Peptide sequences identified	Peaks	Peaks sequenced	Peaks sequenced [%]	Peaks repeatedly sequenced	Peaks repeatedly sequenced [%]	Isotope patterns	Isotope patterns sequenced	Isotope patterns sequenced (z>1)	Isotope patterns sequenced [%]	Isotope patterns sequenced (z>1) [%]	Isotope patterns repeatedly sequenced	Isotope patterns repeatedly sequenced [%]	Recalibrated	Av. absolute mass deviation [ppm]	Mass standard deviation [ppm]	Av. absolute mass deviation [mDa]	Mass standard deviation [mDa]	Label free norm param
220330_C22_014_OE480_Thermo_Rev06_#22_019_PAP22_055	55	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		6725	61982	0	89268	34696	0	54572	2127	2056	0	71	2.4	5.9	0	0.13	1707	437472	52800	12	3519	6.7	50622	26594	23532	53	65	5999	23	+	0.37502	0.52471	0.26994	0.39074	
220330_C22_014_OE480_Thermo_Rev06_#22_019_PAP22_055_2	55_2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		6678	62374	0	89524	35220	0	54304	2322	2245	0	77	2.6	6.4	0	0.14	1847	440602	53045	12	3551	6.7	51581	26942	23898	52	65	6091	23	+	0.38755	0.55028	0.27963	0.41489	
220330_C22_014_OE480_Thermo_Rev06_#22_019_PAP22_070	70	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		6893	60471	0	89626	31312	0	58314	1435	1371	0	64	1.6	4.4	0	0.11	799	404551	49368	12	3986	8.1	45443	22848	19964	50	63	5842	26	+	0.34605	0.48948	0.2516	0.37451	
220330_C22_014_OE480_Thermo_Rev06_#22_019_PAP22_070_2	70_2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		6934	60083	0	89324	30822	0	58502	1350	1283	0	67	1.5	4.2	0	0.11	722	401787	49119	12	3902	7.9	44307	22403	19545	51	63	5879	26	+	0.34058	0.48437	0.25195	0.38991	
220330_C22_014_OE480_Thermo_Rev06_#22_019_PAP22_071	71	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		7096	58792	0	89129	28449	0	60680	1711	1639	0	72	1.9	5.8	0	0.12	814	430531	47432	11	4341	9.2	42228	20056	17387	47	60	5582	28	+	0.39018	0.56774	0.2906	0.45926	
220330_C22_014_OE480_Thermo_Rev06_#22_019_PAP22_071_2	71_2	Trypsin/P	Specific			False	Oxidation (M);Acetyl (Protein N-term)	Carbamidomethyl (C)			False	False	1	2		Standard		6965	59872	0	90974	28768	0	62206	1453	1391	0	62	1.6	4.8	0	0.1	689	430734	47809	11	4424	9.3	42884	20093	17455	47	58	5718	28	+	0.44113	0.57822	0.32617	0.46636	
Total																		41291	363574	0	537845	189267	0	348578	10398	9985	0	413	1.9	5.3	0	0.12	2772	2545677					277065	138936	121781	50	62	35111	25		0.38041	0.53529	0.27757	0.41478