MTD mzTab-version 1.0 MTD mzTab-mode Complete MTD mzTab-type Identification MTD description JPST000210 -- new MTD ms_run[1]-location D:\JobRequest\ResultFiles\20220618\20220618013151313589^fe80..dc7a.184c.1632.7be4^jpost@jpost.jpost\PeakList.MaxQuantPlist1\121026_CRC_N_Fr27.maxq.txt MTD ms_run[2]-location D:\JobRequest\ResultFiles\20220618\20220618013151313589^fe80..dc7a.184c.1632.7be4^jpost@jpost.jpost\Psearch.MaxQuantExec1\121026_CRC_N_Fr27.maxqFin.txt MTD software[1] [MS, MS:1001583, MaxQuant, 1.6.17.0] MTD software[1]-setting Taxon=userFasta.sprot_human_20200318 MTD software[1]-setting enzymes=Trypsin/P MTD software[1]-setting enzymeMode=0 MTD software[1]-setting fixedModifications=Carbamidomethyl (C) MTD software[1]-setting variableModifications=Oxidation (M),Phospho (STY) MTD software[1]-setting maxMissedCleavages=2 MTD software[1]-setting lcmsRunType=Standard MTD software[1]-setting firstSearchTol=20 MTD software[1]-setting mainSearchTol=4.5 MTD software[2] [MS, MS:1001476, X!Tandem, 2015.04.01.1] MTD software[2]-setting DB=userFasta.sprot_human_20200318 MTD software[2]-setting CLE=[RK]|{} MTD software[2]-setting MODS=Carbamidomethyl (C) MTD software[2]-setting IT_MODS=Oxidation (M),Phospho (S),Phospho (T),Phospho (Y) MTD software[2]-setting TOL(-)=10 MTD software[2]-setting TOL(+)=10 MTD software[2]-setting TOLU=ppm MTD software[2]-setting ITOL=750 MTD software[2]-setting ITOLU=ppm MTD software[2]-setting PEP_ISOTOPE_ERROR=yes MTD software[2]-setting PFA=2 MTD software[3] [MS, MS:1002251, Comet, 2019.01 rev. 5] MTD software[3]-setting Taxon=userFasta.sprot_human_20200318 MTD software[3]-setting search_enzyme_number=2 MTD software[3]-setting FixMod=Carbamidomethyl (C) MTD software[3]-setting VarMod=Oxidation (M),Phospho (S),Phospho (T),Phospho (Y) MTD software[3]-setting max_variable_mods_in_peptide=5 MTD software[3]-setting allowed_missed_cleavage=2 MTD software[3]-setting peptide_mass_tolerance=10 MTD software[3]-setting peptide_mass_units=2 MTD software[3]-setting fragment_bin_tol=1.0005 MTD software[3]-setting fragment_bin_offset=0.4 MTD fixed_mod[1] [UNIMOD, UNIMOD:4, Carbamidomethyl,] MTD fixed_mod[1]-site C MTD fixed_mod[1]-position Anywhere MTD variable_mod[1] [UNIMOD, UNIMOD:35, Oxidation,] MTD variable_mod[1]-site M MTD variable_mod[1]-position Anywhere MTD variable_mod[2] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[2]-site S MTD variable_mod[2]-position Anywhere MTD variable_mod[3] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[3]-site T MTD variable_mod[3]-position Anywhere MTD variable_mod[4] [UNIMOD, UNIMOD:21, Phospho,] MTD variable_mod[4]-site Y MTD variable_mod[4]-position Anywhere MTD protein_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] MTD psm_search_engine_score[1] [http://rdf.jpostdb.org/ontology/jpost.owl#JpostScore] PRH accession description taxid species database database_version search_engine best_search_engine_score[1] ambiguity_members modifications protein_coverage search_engine_score[1]_ms_run[1] num_psms_ms_run[1] num_peptides_distinct_ms_run[1] num_peptides_unique_ms_run[1] PRT sp|P35606-2|COPB2_HUMAN Isoform 2 of Coatomer subunit beta' OS=Homo sapiens OX=9606 GN=COPB2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 34.0 null 830-UNIMOD:21 0.03 34.0 1 1 1 PRT sp|P14625|ENPL_HUMAN Endoplasmin OS=Homo sapiens OX=9606 GN=HSP90B1 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 33.0 null 0.02 33.0 1 1 1 PRT sp|Q13243-2|SRSF5_HUMAN Isoform SRP40-2 of Serine/arginine-rich splicing factor 5 OS=Homo sapiens OX=9606 GN=SRSF5 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 31.0 null 0.12 31.0 2 1 0 PRT sp|P20042|IF2B_HUMAN Eukaryotic translation initiation factor 2 subunit 2 OS=Homo sapiens OX=9606 GN=EIF2S2 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 31.0 null 0.05 31.0 1 1 1 PRT sp|P10301|RRAS_HUMAN Ras-related protein R-Ras OS=Homo sapiens OX=9606 GN=RRAS PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 29.0 null 0.06 29.0 1 1 1 PRT sp|P13667|PDIA4_HUMAN Protein disulfide-isomerase A4 OS=Homo sapiens OX=9606 GN=PDIA4 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 null 0.02 28.0 1 1 1 PRT sp|P07339|CATD_HUMAN Cathepsin D OS=Homo sapiens OX=9606 GN=CTSD PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 null 246-UNIMOD:35 0.05 28.0 1 1 1 PRT sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens OX=9606 GN=AHNAK PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 27.0 null 5841-UNIMOD:21,135-UNIMOD:21 0.01 27.0 2 2 2 PRT sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens OX=9606 GN=MYH11 PE=1 SV=3 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 27.0 null 1954-UNIMOD:21 0.01 27.0 1 1 1 PRT sp|Q9UJJ7|RUSD1_HUMAN RNA pseudouridylate synthase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RPUSD1 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 25.0 null 273-UNIMOD:21 0.09 25.0 1 1 1 PRT sp|Q13247-2|SRSF6_HUMAN Isoform SRP55-2 of Serine/arginine-rich splicing factor 6 OS=Homo sapiens OX=9606 GN=SRSF6 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 null 0.10 24.0 1 1 1 PRT sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=Homo sapiens OX=9606 GN=LIMA1 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 null 490-UNIMOD:21 0.02 24.0 1 1 1 PRT sp|Q15019|SEPT2_HUMAN Septin-2 OS=Homo sapiens OX=9606 GN=SEPTIN2 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 null 218-UNIMOD:21 0.06 24.0 1 1 1 PRT sp|P16403|H12_HUMAN Histone H1.2 OS=Homo sapiens OX=9606 GN=H1-2 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 null 36-UNIMOD:21 0.07 24.0 1 1 1 PRT sp|P01833|PIGR_HUMAN Polymeric immunoglobulin receptor OS=Homo sapiens OX=9606 GN=PIGR PE=1 SV=4 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 24.0 null 735-UNIMOD:21,741-UNIMOD:35 0.02 24.0 1 1 1 PRT sp|P60174-1|TPIS_HUMAN Isoform 2 of Triosephosphate isomerase OS=Homo sapiens OX=9606 GN=TPI1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 null 21-UNIMOD:21 0.06 23.0 1 1 1 PRT sp|O14558|HSPB6_HUMAN Heat shock protein beta-6 OS=Homo sapiens OX=9606 GN=HSPB6 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 null 16-UNIMOD:21 0.09 23.0 1 1 1 PRT sp|P51858-2|HDGF_HUMAN Isoform 2 of Hepatoma-derived growth factor OS=Homo sapiens OX=9606 GN=HDGF null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 22.0 null 158-UNIMOD:21 0.05 22.0 1 1 1 PRT sp|O15144|ARPC2_HUMAN Actin-related protein 2/3 complex subunit 2 OS=Homo sapiens OX=9606 GN=ARPC2 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 22.0 null 0.03 22.0 1 1 1 PRT sp|Q14978|NOLC1_HUMAN Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 22.0 null 0.02 22.0 1 1 1 PRT sp|P62995|TRA2B_HUMAN Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 22.0 null 201-UNIMOD:21,208-UNIMOD:35 0.05 22.0 1 1 1 PRT sp|O60716|CTND1_HUMAN Catenin delta-1 OS=Homo sapiens OX=9606 GN=CTNND1 PE=1 SV=1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 22.0 null 268-UNIMOD:21 0.01 22.0 1 1 1 PRT sp|Q04637-6|IF4G1_HUMAN Isoform E of Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens OX=9606 GN=EIF4G1 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 21.0 null 0.01 21.0 1 1 1 PRT sp|P04792|HSPB1_HUMAN Heat shock protein beta-1 OS=Homo sapiens OX=9606 GN=HSPB1 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 21.0 null 82-UNIMOD:21 0.05 21.0 1 1 1 PRT sp|Q9NZM4-2|BICRA_HUMAN Isoform 2 of BRD4-interacting chromatin-remodeling complex-associated protein OS=Homo sapiens OX=9606 GN=BICRA null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 21.0 null 677-UNIMOD:21 0.02 21.0 1 1 1 PRT sp|P16383|GCFC2_HUMAN GC-rich sequence DNA-binding factor 2 OS=Homo sapiens OX=9606 GN=GCFC2 PE=1 SV=2 null null userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 21.0 null 612-UNIMOD:21 0.02 21.0 1 1 1 PSH sequence PSM_ID accession unique database database_version search_engine search_engine_score[1] modifications spectra_ref retention_time charge exp_mass_to_charge calc_mass_to_charge pre post start end PSM STAQQELDGKPASPTPVIVASHTANK 1 sp|P35606-2|COPB2_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 34.0 13-UNIMOD:21 ms_run[2]:scan=5727 55.715 3 2726.3276 2726.3276 R E 818 844 PSM GVVDSDDLPLNVSR 2 sp|P14625|ENPL_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 33.0 ms_run[2]:scan=8216 78.097 2 1484.7471 1484.7471 K E 435 449 PSM DADDAVYELDGK 3 sp|Q13243-2|SRSF5_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 31.0 ms_run[2]:scan=6333 61.149 2 1309.5674 1309.5674 R E 49 61 PSM DASDDLDDLNFFNQK 4 sp|P20042|IF2B_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 31.0 ms_run[2]:scan=12531 116.4 2 1755.7588 1755.7588 K K 65 80 PSM DRDDFPVVLVGNK 5 sp|P10301|RRAS_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 29.0 ms_run[2]:scan=8495 80.61 2 1472.7623 1472.7623 K A 131 144 PSM DADDAVYELDGK 6 sp|Q13243-2|SRSF5_HUMAN 0 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 ms_run[2]:scan=5378 52.556 2 1309.5674 1309.5674 R E 49 61 PSM DGDDVIIIGVFK 7 sp|P13667|PDIA4_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 ms_run[2]:scan=12682 117.69 2 1289.6867 1289.6867 K G 302 314 PSM DPDAQPGGELMLGGTDSK 8 sp|P07339|CATD_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 28.0 11-UNIMOD:35 ms_run[2]:scan=5610 54.685 2 1802.7993 1802.7993 R Y 236 254 PSM GHYEVTGSDDETGK 9 sp|Q09666|AHNK_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 27.0 8-UNIMOD:21 ms_run[2]:scan=1674 17.45 2 1573.5934 1573.5934 K L 5834 5848 PSM RVIENADGSEEETDTR 10 sp|P35749|MYH11_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 27.0 9-UNIMOD:21 ms_run[2]:scan=1843 19.129 2 1899.7847 1899.7847 R D 1946 1962 PSM PGSPSALLPGPGRPPPPPTKPPETEAQR 11 sp|Q9UJJ7|RUSD1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 25.0 5-UNIMOD:21 ms_run[1]:scan=7131 68.28474333333334 3 2908.469348 2907.464408 R G 269 297 PSM DADDAVYELNGK 12 sp|Q13247-2|SRSF6_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 ms_run[2]:scan=5541 54.066 2 1308.5834 1308.5834 R E 47 59 PSM ETPHSPGVEDAPIAK 13 sp|Q9UHB6|LIMA1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 5-UNIMOD:21 ms_run[2]:scan=3613 36.74 2 1626.7291 1626.7291 R V 486 501 PSM IYHLPDAESDEDEDFKEQTR 14 sp|Q15019|SEPT2_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 9-UNIMOD:21 ms_run[2]:scan=7363 70.399 3 2516.0381 2516.0381 K L 210 230 PSM KASGPPVSELITK 15 sp|P16403|H12_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 24.0 3-UNIMOD:21 ms_run[2]:scan=6398 61.707 2 1405.7218 1405.7218 R A 34 47 PSM RSSKEEAEMAYK 16 sp|P01833|PIGR_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 24.0 3-UNIMOD:21,9-UNIMOD:35 ms_run[1]:scan=737 7.44182 2 1523.633084 1523.632725 K D 733 745 PSM KQSLGELIGTLNAAK 17 sp|P60174-1|TPIS_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 3-UNIMOD:21 ms_run[2]:scan=11186 104.48 2 1621.844 1621.8440 R V 19 34 PSM LKSEDGVEGDLGETQSR 18 sp|Q09666|AHNK_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 3-UNIMOD:21 ms_run[2]:scan=4477 44.51 3 1898.8259 1898.8259 R T 133 150 PSM RASAPLPGLSAPGR 19 sp|O14558|HSPB6_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 23.0 3-UNIMOD:21 ms_run[2]:scan=5913 57.353 2 1428.7239 1428.7239 R L 14 28 PSM AGDLLEDSPK 20 sp|P51858-2|HDGF_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 22.0 8-UNIMOD:21 ms_run[2]:scan=4135 41.476 2 1123.4798 1123.4798 R R 151 161 PSM DDDDVVIGK 21 sp|O15144|ARPC2_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 22.0 ms_run[2]:scan=2836 29.303 2 974.45566 974.4557 K V 171 180 PSM VREEEIEVDSR 22 sp|Q14978|NOLC1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 22.0 ms_run[2]:scan=2739 28.325 2 1359.663 1359.6630 R V 628 639 PSM RPHTPTPGIYMGR 23 sp|P62995|TRA2B_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 22.0 4-UNIMOD:21,11-UNIMOD:35 ms_run[1]:scan=2708 28.029463333333336 3 1577.716853 1577.717398 K P 198 211 PSM VGGSSVDLHR 24 sp|O60716|CTND1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 22.0 4-UNIMOD:21 ms_run[1]:scan=2349 24.488715 2 1105.491815 1105.491738 R F 265 275 PSM DKDDDEVFEK 25 sp|Q04637-6|IF4G1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 21.0 ms_run[2]:scan=2438 25.365 2 1238.5303 1238.5303 K K 658 668 PSM QLSSGVSEIR 26 sp|P04792|HSPB1_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 21.0 3-UNIMOD:21 ms_run[2]:scan=4863 48 2 1154.5333 1154.5333 R H 80 90 PSM SPTPPPTLHLVPEPAAPPPPPPR 27 sp|Q9NZM4-2|BICRA_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1001583, MaxQuant, ] 21.0 1-UNIMOD:21 ms_run[2]:scan=9184 86.804 3 2441.2508 2441.2508 K T 677 700 PSM QDLLKSIVSRMK 28 sp|P16383|GCFC2_HUMAN 1 userFasta.sprot_human_20200318 userFasta.sprot_human_20200318 [MS, MS:1002251, Comet, ] 21.0 9-UNIMOD:21 ms_run[1]:scan=6999 67.08722166666666 2 1497.767429 1496.778601 R K 604 616