Raw file Experiment Fraction Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Fixed modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Labels0 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS Submitted MS/MS Submitted (SIL) MS/MS Submitted (ISO) MS/MS Submitted (PEAK) MS/MS Identified MS/MS Identified (SIL) MS/MS Identified (ISO) MS/MS Identified (PEAK) MS/MS Identified [%] MS/MS Identified (SIL) [%] MS/MS Identified (ISO) [%] MS/MS Identified (PEAK) [%] Peptide Sequences Identified Peaks Peaks Sequenced Peaks Sequenced [%] Peaks Repeatedly Sequenced Peaks Repeatedly Sequenced [%] Isotope Patterns Isotope Patterns Sequenced Isotope Patterns Sequenced (z>1) Isotope Patterns Sequenced [%] Isotope Patterns Sequenced (z>1) [%] Isotope Patterns Repeatedly Sequenced Isotope Patterns Repeatedly Sequenced [%] Recalibrated Av. Absolute Mass Deviation [ppm] Mass Standard Deviation [ppm] Av. Absolute Mass Deviation [mDa] Mass Standard Deviation [mDa] Label free norm param 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP630_p CPK5_2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6365 45295 0 49310 41280 0 8030 19983 19578 0 405 41 47 0 5 12545 936200 42819 4.6 1382 3.2 140148 38384 37782 27 33 2445 6.4 + 0.33532 0.48281 0.25962 0.39768 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP638_p C1_CKP5_2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6479 50142 0 54337 45947 0 8390 23701 23217 0 484 44 51 0 5.8 14681 981923 47350 4.8 1709 3.6 144661 42377 41903 29 33 2970 7 + 0.34146 0.49048 0.26521 0.40769 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP632_p CPK5_4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6383 50078 0 54344 45812 0 8532 23297 22805 0 492 43 50 0 5.8 14717 965207 47211 4.9 1661 3.5 146031 42350 41859 29 33 2903 6.9 + 0.3385 0.48765 0.26513 0.40719 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP629_i CPK5_1 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11775 67119 0 75467 58771 0 16696 44399 41985 0 2414 59 71 0 14 37622 1106815 64302 5.8 1190 1.9 167511 55571 54852 33 36 2926 5.3 + 0.69967 1.0202 0.47473 0.72695 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP619_i mock_3 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11231 69610 0 78756 60464 0 18292 44796 42336 0 2460 57 70 0 13 37175 1142032 66640 5.8 1121 1.7 176424 57349 56459 33 35 2842 5 + 0.69509 1.0124 0.47699 0.72802 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP637_i C1_CPK5_1 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11491 68204 0 76967 59441 0 17526 44246 41832 0 2414 57 70 0 14 37309 1128867 65261 5.8 1146 1.8 172988 56405 55586 33 35 2774 4.9 + 0.69741 1.0149 0.47362 0.72238 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP617_i mock_1 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11306 68576 0 76505 60647 0 15858 45317 42891 0 2426 59 71 0 15 38524 1105093 65951 6 1048 1.6 173568 57596 56927 33 36 2776 4.8 + 0.6859 1.0021 0.46718 0.71915 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP634_i BIK1_2 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11643 65985 0 74074 57896 0 16178 42706 40451 0 2255 58 70 0 14 36595 1093025 63387 5.8 1046 1.7 167791 54948 54193 33 36 2699 4.9 + 0.69174 1.0135 0.46105 0.70551 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP639_i C1_CPK5_3 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11129 70672 0 79841 61503 0 18338 46549 44053 0 2496 58 72 0 14 38800 1139308 67590 5.9 1178 1.7 178940 58302 57439 33 35 2933 5 + 0.70116 1.0195 0.48069 0.73335 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP631_i CPK5_3 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11280 70146 0 80994 59298 0 21696 46058 42801 0 3257 57 72 0 15 35501 1062369 65106 6.1 2301 3.5 156384 53846 52968 34 37 4371 8.1 + 0.71818 1.0455 0.49054 0.75141 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP622_p Ca_2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6355 48716 0 52654 44778 0 7876 23135 22709 0 426 44 51 0 5.4 14866 1001506 46259 4.6 1381 3 151721 41973 41502 28 32 2382 5.7 + 0.3385 0.49425 0.26566 0.41469 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP633_p BIK1_1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6525 50083 0 54344 45822 0 8522 23427 22944 0 483 43 50 0 5.7 14592 991325 47513 4.8 1456 3.1 148573 42749 42150 29 33 2623 6.1 + 0.33702 0.48018 0.26481 0.40103 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP618_i mock_2 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11162 69293 0 77876 60708 0 17168 45383 42965 0 2418 58 71 0 14 38435 1092756 66453 6.1 1108 1.7 172624 57636 56885 33 36 2802 4.9 + 0.68425 1.0039 0.46343 0.7136 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP638_i C1_CKP5_2 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11274 69641 0 78727 60555 0 18172 45411 42945 0 2466 58 71 0 14 37925 1115244 66597 6 1226 1.8 173620 57308 56418 33 36 2990 5.2 + 0.68903 1.0039 0.46908 0.71732 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP636_p BIK1_4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6451 44494 0 48400 40588 0 7812 19815 19414 0 401 41 48 0 5.1 12369 923926 42065 4.6 1337 3.2 138071 37842 37134 27 33 2329 6.2 + 0.33904 0.48616 0.26023 0.39437 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP623_p Ca_3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6020 48584 0 52107 45061 0 7046 24246 23786 0 460 47 53 0 6.5 15771 1045990 46344 4.4 1276 2.8 162045 42549 42134 26 29 2084 4.9 + 0.3315 0.49005 0.26521 0.42573 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP623_i Ca_3 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 10930 70721 0 81154 60288 0 20866 46900 43773 0 3127 58 73 0 15 36552 1043666 66297 6.4 1847 2.8 161127 55512 54661 34 37 3857 6.9 + 0.71842 1.0458 0.48896 0.751 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP617_p mock_1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 5927 45868 0 49589 42147 0 7442 20905 20572 0 333 42 49 0 4.5 13832 949540 43286 4.6 1449 3.3 143744 39146 38726 27 32 2373 6.1 + 0.31695 0.47308 0.24662 0.39561 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP620_p mock_4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6267 47977 0 51757 44197 0 7560 22710 22419 0 291 44 51 0 3.8 14844 1002275 45544 4.5 1370 3 152724 41443 41004 27 31 2298 5.5 + 0.31782 0.47297 0.24969 0.40444 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP622_i Ca_2 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11330 68356 0 76533 60179 0 16354 45200 42823 0 2377 59 71 0 15 38264 1114194 65773 5.9 1024 1.6 175354 57261 56499 33 35 2662 4.6 + 0.6917 1.012 0.4642 0.70869 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP640_i C1_CPK5_4 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11591 67790 0 77114 58466 0 18648 43691 41201 0 2490 57 70 0 13 36723 1119160 64651 5.8 1233 1.9 166975 55208 54364 33 36 3015 5.5 + 0.69364 1.0114 0.46931 0.71485 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP625_i C1C26_1 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 12270 65312 0 73889 56735 0 17154 42510 40151 0 2359 58 71 0 14 35945 1148260 62381 5.4 1226 2 167085 53533 52743 32 36 2929 5.5 + 0.69369 1.013 0.46469 0.71072 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP624_p Ca_4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6355 48819 0 52681 44957 0 7724 23394 22933 0 461 44 51 0 6 15192 983159 46357 4.7 1360 2.9 149622 42115 41634 28 32 2373 5.6 + 0.33039 0.482 0.25656 0.39567 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP629_p CPK5_1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6315 47724 0 51727 43721 0 8006 21686 21268 0 418 42 49 0 5.2 13620 970728 45257 4.7 1406 3.1 143470 40746 40269 28 33 2552 6.3 + 0.33138 0.48093 0.25991 0.40465 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP624_i Ca_4 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 12403 64614 0 74394 54834 0 19560 41016 38370 0 2646 55 70 0 14 34183 1131220 60995 5.4 1539 2.5 155725 51018 50200 33 36 3521 6.9 + 0.70488 1.0214 0.47297 0.71596 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP630_i CPK5_2 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11856 66548 0 75193 57903 0 17290 44022 41529 0 2493 59 72 0 14 37443 1085491 63489 5.8 1258 2 161565 54570 53883 34 36 3029 5.6 + 0.69544 1.0162 0.46898 0.71979 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP637_p C1_CPK5_1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6583 48226 0 52342 44110 0 8232 22739 22237 0 502 43 50 0 6.1 14210 924531 45322 4.9 1776 3.9 136627 40446 39904 30 34 3042 7.5 + 0.33697 0.48713 0.26017 0.39996 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP619_p mock_3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6235 47758 0 51409 44107 0 7302 22915 22498 0 417 45 51 0 5.7 15408 1011857 45500 4.5 1235 2.7 154647 41541 41006 27 31 2162 5.2 + 0.31966 0.47809 0.2482 0.40001 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP621_i Ca_1 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11358 68048 0 76197 59899 0 16298 45123 42807 0 2316 59 71 0 14 38675 1097582 65502 6 1000 1.5 172495 57067 56390 33 36 2587 4.5 + 0.6756 0.99238 0.45495 0.69851 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP632_i CPK5_4 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 12223 66197 0 75098 57296 0 17802 43313 40750 0 2563 58 71 0 14 36129 1133557 62881 5.5 1537 2.4 165326 53593 52701 32 36 3377 6.3 + 0.69974 1.0221 0.47336 0.72851 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP625_p C1C26_1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6424 49308 0 53371 45245 0 8126 23265 22781 0 484 44 50 0 6 15329 1003020 46890 4.7 1359 2.9 153924 42502 41954 28 32 2337 5.5 + 0.31968 0.4675 0.2474 0.3883 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP639_p C1_CPK5_3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6632 50975 0 55374 46576 0 8798 24285 23778 0 507 44 51 0 5.8 15076 1016949 48245 4.7 1623 3.4 149209 43190 42659 29 33 2895 6.7 + 0.33775 0.49275 0.26021 0.40538 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP640_p C1_CPK5_4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6466 49199 0 53298 45100 0 8198 23306 22883 0 423 44 51 0 5.2 14428 971829 46401 4.8 1655 3.6 145051 41691 41159 29 33 2874 6.9 + 0.33141 0.47919 0.25843 0.40021 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP635_p BIK1_3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6593 50884 0 55113 46655 0 8458 24111 23578 0 533 44 51 0 6.3 15749 1000935 48104 4.8 1622 3.4 150041 43275 42811 29 32 2820 6.5 + 0.32346 0.47672 0.25203 0.40081 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP633_i BIK1_1 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11591 68171 0 77066 59276 0 17790 44931 42434 0 2497 58 72 0 14 38062 1093700 65050 5.9 1319 2 168446 55911 55152 33 36 3058 5.5 + 0.69563 1.0149 0.47239 0.72417 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP618_p mock_2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6267 46545 0 50396 42694 0 7702 21797 21329 0 468 43 50 0 6.1 13788 984765 44144 4.5 1273 2.9 147429 40063 39534 27 32 2201 5.5 + 0.33938 0.49463 0.2665 0.41696 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP636_i BIK1_4 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11523 65837 0 74041 57633 0 16408 42294 40224 0 2070 57 70 0 13 35805 1096731 63346 5.8 949 1.5 167102 54899 54196 33 36 2500 4.6 + 0.68741 1.0094 0.45481 0.69767 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP635_i BIK1_3 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11618 68599 0 77347 59851 0 17496 45326 42886 0 2440 59 72 0 14 38123 1124329 65649 5.8 1223 1.9 172532 56618 55842 33 36 2971 5.2 + 0.69934 1.0188 0.47681 0.72971 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP627_i C1C26_3 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11252 67966 0 77540 58392 0 19148 43752 41169 0 2583 56 71 0 13 35531 1084259 64519 6 1505 2.3 161479 54511 53724 34 37 3430 6.3 + 0.71861 1.0465 0.49233 0.75415 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP620_i mock_4 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11275 69613 0 78158 61068 0 17090 45870 43324 0 2546 59 71 0 15 39065 1108223 66773 6 1122 1.7 173883 57958 57162 33 36 2846 4.9 + 0.68657 1.005 0.46748 0.71914 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP628_i C1C26_4 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11786 66417 0 74872 57962 0 16910 43447 40975 0 2472 58 71 0 15 36885 1114064 63750 5.7 1064 1.7 167200 54981 54235 33 36 2757 5 + 0.68822 1.0057 0.46072 0.70366 201007_C20_023_QHF1_Standard_Rev02_#20_056_PAP626_i C1C26_2 1 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);DeamNQ Carbamidomethyl (C) True False 1 2 Standard 11823 66473 0 75062 57884 0 17178 43099 40713 0 2386 57 70 0 14 36196 1124753 63640 5.7 1190 1.9 167282 54677 53915 33 36 2951 5.4 + 0.69469 1.0155 0.46944 0.71728 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP634_p BIK1_2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6438 48309 0 52510 44108 0 8402 22088 21611 0 477 42 49 0 5.7 13928 988291 45761 4.6 1431 3.1 147730 41226 40607 28 32 2478 6 + 0.34324 0.50327 0.26802 0.42335 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP627_p C1C26_3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6132 50442 0 54068 46814 0 7254 21823 21473 0 350 40 46 0 4.8 14590 1038356 48162 4.6 1324 2.7 166688 44251 43766 27 30 2128 4.8 + 0.32902 0.47583 0.25802 0.39619 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP631_p CPK5_3 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6086 49370 0 52571 46169 0 6402 26050 25540 0 510 50 55 0 8 17975 1024262 47225 4.6 1298 2.7 163123 43565 43182 27 29 2146 4.9 + 0.30726 0.46154 0.23822 0.38425 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP621_p Ca_1 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6268 47079 0 50993 43165 0 7828 21984 21512 0 472 43 50 0 6 14033 986993 44671 4.5 1281 2.9 148594 40518 40011 27 32 2245 5.5 + 0.34366 0.49861 0.2692 0.41876 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP626_p C1C26_2 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6484 47875 0 51790 43960 0 7830 22629 22181 0 448 44 50 0 5.7 14491 987974 45424 4.6 1310 2.9 149736 41266 40727 28 32 2261 5.5 + 0.32717 0.48137 0.25148 0.39066 201007_C20_023_QHF1_PTM_Rev02_#20_056_PAP628_p C1C26_4 10 Trypsin/P Specific Trypsin/P Specific True Oxidation (M);Acetyl (Protein N-term);Phospho (STY) Carbamidomethyl (C) True False 1 2 Standard 6412 48634 0 52423 44845 0 7578 22769 22356 0 413 43 50 0 5.4 14343 976060 46188 4.7 1403 3 148699 41947 41486 28 32 2435 5.8 + 0.32369 0.47012 0.25192 0.38869 Total 429582 2792292 0 3099773 2484807 0 614966 1611419 1540790 0 70629 52 62 0 11 109290 50272299 7625734 2333433 2302297 31 34 131959 5.7 0.57219 0.87265 0.39886 0.63178