Raw file	Experiment	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Fixed modifications	Multi modifications	Variable modifications first search	Use variable modifications first search	Requantify	Multiplicity	Max. missed cleavages	Labels0	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS3	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
V201110_24	2020-147-01_1	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7101	31228	0	36571	25881	0	10690	1824	1789	0	35	5	6.9	0	0.33	1705	667202	29609	4.4	537	1.8	67966	23651	23277	35	40	1870	7.9	+	0.66309	0.86551	0.51662	0.70848	
V201110_25	2020-147-02_1	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7071	31850	0	36222	27476	0	8746	2581	2513	0	68	7.1	9.1	0	0.78	2442	677528	30570	4.5	481	1.6	76397	25485	25168	33	38	1692	6.6	+	0.55557	0.76296	0.42243	0.62101	
V201110_26	2020-147-03_1	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7217	29327	0	35554	23086	0	12468	101	99	0	2	0.28	0.43	0	0.016	112	655610	27534	4.2	532	1.9	62349	21305	20897	34	41	1524	7.2	+	0.78215	1.0223	0.65682	0.86792	
V201110_27	2020-147-04_1	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7175	29799	0	35344	24238	0	11106	495	487	0	8	1.4	2	0	0.072	477	656176	28240	4.3	459	1.6	66801	22489	22089	34	40	1532	6.8	+	0.73314	0.93646	0.58006	0.76752	
V201110_28	2020-147-01_2	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7119	31064	0	36196	25924	0	10272	1870	1824	0	46	5.2	7	0	0.45	1718	653341	29333	4.5	552	1.9	69151	23721	23397	34	39	1828	7.7	+	0.59271	0.79557	0.46143	0.65761	
V201110_29	2020-147-02_2	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7071	31805	0	36220	27388	0	8832	2520	2438	0	82	7	8.9	0	0.93	2405	680306	30420	4.5	473	1.6	77519	25468	25168	33	37	1583	6.2	+	0.53404	0.73736	0.40767	0.59449	
V201110_30	2020-147-03_2	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7242	29106	0	35135	23067	0	12068	65	63	0	2	0.19	0.27	0	0.017	75	648139	27364	4.2	524	1.9	62860	21286	20895	34	40	1523	7.2	+	1.4232	1.702	1.2194	1.4406	
V201110_31	2020-147-04_2	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7207	29609	0	35201	24005	0	11196	505	496	0	9	1.4	2.1	0	0.08	495	644274	27996	4.3	448	1.6	66020	22292	21890	34	40	1512	6.8	+	0.91694	1.1437	0.7203	0.93545	
V201110_32	2020-147-01_3	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7137	30861	0	35831	25879	0	9952	1904	1851	0	53	5.3	7.2	0	0.53	1787	644200	29142	4.5	512	1.8	69554	23727	23414	34	39	1754	7.4	+	0.80072	0.97904	0.61688	0.78856	
V201110_33	2020-147-02_3	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7086	31744	0	36045	27437	0	8608	2636	2539	0	97	7.3	9.3	0	1.1	2498	674491	30364	4.5	476	1.6	77256	25514	25244	33	37	1619	6.3	+	0.58769	0.80236	0.44207	0.63395	
V201110_34	2020-147-03_3	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7272	28830	0	34880	22778	0	12102	100	96	0	4	0.29	0.42	0	0.033	117	637559	27093	4.2	505	1.9	62596	21001	20593	34	40	1509	7.2	+	0.87246	1.1488	0.69701	0.97032	
V201110_35	2020-147-04_3	Trypsin/P	Specific			False	Oxidation (M)	Carbamidomethyl (C)			False	False	1	2		Standard		7184	29780	0	35330	24214	0	11116	503	494	0	9	1.4	2	0	0.081	494	658959	28177	4.3	495	1.8	67092	22500	22111	34	40	1493	6.6	+	0.70549	0.90643	0.54351	0.71878	
Total																		85882	365003	0	428529	301373	0	127156	15104	14689	0	415	3.5	4.9	0	0.33	3808	7897785					825561	278439	274143	34	39	19439	7		0.63645	0.84892	0.49022	0.68836