Raw file Experiment Fraction Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Fixed modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Labels0 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS Submitted MS/MS Submitted (SIL) MS/MS Submitted (ISO) MS/MS Submitted (PEAK) MS/MS Identified MS/MS Identified (SIL) MS/MS Identified (ISO) MS/MS Identified (PEAK) MS/MS Identified [%] MS/MS Identified (SIL) [%] MS/MS Identified (ISO) [%] MS/MS Identified (PEAK) [%] Peptide Sequences Identified Peaks Peaks Sequenced Peaks Sequenced [%] Peaks Repeatedly Sequenced Peaks Repeatedly Sequenced [%] Isotope Patterns Isotope Patterns Sequenced Isotope Patterns Sequenced (z>1) Isotope Patterns Sequenced [%] Isotope Patterns Sequenced (z>1) [%] Isotope Patterns Repeatedly Sequenced Isotope Patterns Repeatedly Sequenced [%] Recalibrated Av. Absolute Mass Deviation [ppm] Mass Standard Deviation [ppm] Av. Absolute Mass Deviation [mDa] Mass Standard Deviation [mDa] Label free norm param f210803_01 8A_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14006 113444 0 189964 36920 0 153044 1449 1308 0 141 0.76 3.5 0 0.092 886 716432 72647 10 12416 17 50955 20757 17569 41 56 9517 46 + 0.88656 0.98948 0.60911 0.70492 f210803_02 8B_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11522 133087 0 208544 57622 0 150922 4860 4504 0 356 2.3 7.8 0 0.24 3614 622775 87854 14 16577 19 55686 32329 29875 58 72 15991 49 + 1.2696 1.3335 0.89419 0.96392 f210803_04 6A_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13488 120051 0 199822 40280 0 159542 2903 2681 0 222 1.5 6.7 0 0.14 1875 706938 75908 11 13510 18 49466 22035 19227 45 61 10707 49 + 0.57352 0.69958 0.38553 0.49014 f210803_05 6B_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10876 138978 0 214438 63518 0 150920 3906 3428 0 478 1.8 5.4 0 0.32 2897 622329 92526 15 17369 19 59921 35795 33290 60 73 17560 49 + 1.4891 1.5521 1.1133 1.1854 f210803_07 8C_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11114 133149 0 205247 61049 0 144198 9476 8845 0 631 4.6 14 0 0.44 5759 623146 89756 14 16230 18 59801 34635 32397 58 70 16676 48 + 0.71854 0.85419 0.50598 0.62989 f210803_08 8D_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12406 122426 0 188444 56402 0 132042 4197 3462 0 735 2.2 6.1 0 0.56 2820 617639 82631 13 14841 18 55712 31829 29727 57 70 15498 49 + 1.437 1.4935 1.0636 1.1323 f210803_10 6C_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10649 134602 0 204060 65144 0 138916 11569 10843 0 726 5.7 17 0 0.52 7079 680179 91948 14 16639 18 67517 37634 35618 56 70 17598 47 + 0.74935 0.90268 0.52992 0.67539 f210803_11 6D_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11886 125538 0 192845 58227 0 134618 9663 8910 0 753 5 15 0 0.56 5773 595742 83504 14 14755 18 57552 33224 31356 58 71 15916 48 + 0.72728 0.87232 0.46167 0.55607 f210803_13 8E_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12718 120487 0 191285 49689 0 141596 2922 2708 0 214 1.5 5.4 0 0.15 1942 711617 80572 11 14633 18 53785 27724 25219 52 65 13588 49 + 1.1224 1.2153 0.74781 0.86054 f210803_14 8F_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14562 103246 0 166884 39608 0 127276 1980 1803 0 177 1.2 4.6 0 0.14 1159 703923 69926 9.9 12030 17 47437 22118 19743 47 61 10768 49 + 0.72194 0.85767 0.46749 0.57621 f210803_16 6E_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12583 121358 0 191663 51049 0 140614 4121 3868 0 253 2.2 7.6 0 0.18 2528 687800 80460 12 14564 18 55697 28556 26175 51 64 13817 48 + 0.89619 0.98946 0.58937 0.67634 f210803_17 6F_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14781 103174 0 168659 37687 0 130972 985 836 0 149 0.58 2.2 0 0.11 680 679502 67911 10 11687 17 44625 20857 18365 47 60 10233 49 + 1.0681 1.1559 0.73983 0.81617 f210803_19 7A_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12093 125148 0 202530 47746 0 154784 3457 3141 0 316 1.7 6.6 0 0.2 2143 633336 79483 13 14397 18 48783 26290 24049 54 66 12864 49 + 1.2299 1.3019 0.82604 0.92232 f210803_20 7B_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 9871 138613 0 206255 70959 0 135296 13018 12327 0 691 6.3 17 0 0.51 9144 627037 96897 15 17381 18 65159 42212 40371 65 74 18979 45 + 0.89854 1.0014 0.58719 0.66413 f210803_22 5A_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12013 126097 0 203996 48198 0 155798 3653 3378 0 275 1.8 7 0 0.18 2354 643325 80511 13 14715 18 49669 26690 24422 54 66 13071 49 + 1.0256 1.1322 0.6917 0.80388 f210803_23 5B_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 9866 136435 0 202449 70421 0 132028 12019 11427 0 592 5.9 16 0 0.45 8629 632963 95762 15 17031 18 65537 42408 40535 65 74 18739 44 + 0.5723 0.70461 0.35786 0.44675 f210803_25 7C_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10306 136538 0 206159 66863 0 139296 9916 9298 0 618 4.8 14 0 0.44 6128 634007 93459 15 16604 18 63707 38897 36942 61 69 17818 46 + 1.1445 1.2334 0.78373 0.88484 f210803_26 7D_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11802 124911 0 190108 59714 0 130394 9181 8419 0 762 4.8 14 0 0.58 5635 578972 84205 15 14719 17 54986 34240 32536 62 71 16396 48 + 1.0506 1.1295 0.70063 0.76695 f210803_28 5C_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10695 133261 0 202166 64316 0 137850 10500 9889 0 611 5.2 15 0 0.44 6615 633456 90375 14 16123 18 60382 37383 35494 62 71 17395 47 + 0.95678 1.054 0.65182 0.74769 f210803_29 5D_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11656 125435 0 190776 60094 0 130682 6543 5724 0 819 3.4 9.5 0 0.63 4232 588343 84399 14 15030 18 56322 34557 32701 61 70 16373 47 + 1.3127 1.3783 0.95415 1.0218 f210803_31 7E_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12368 123317 0 193789 52845 0 140944 3981 3688 0 293 2.1 7 0 0.21 2652 668511 82215 12 15061 18 52982 29148 26903 55 66 14437 50 + 0.94289 1.0497 0.65943 0.77223 f210803_32 7F_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14370 108242 0 174982 41502 0 133480 1590 1420 0 170 0.91 3.4 0 0.13 975 643783 70544 11 12616 18 45927 22738 20609 50 61 11301 50 + 0.96492 1.073 0.64814 0.73614 f210803_34 5E_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12682 119912 0 188375 51449 0 136926 3763 3684 0 79 2 7.2 0 0.058 2431 692266 79947 12 14651 18 52374 28218 26121 54 66 14120 50 + 1.0043 1.092 0.66996 0.76886 f210803_35 5F_01 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13878 109062 0 173235 44889 0 128346 2693 2461 0 232 1.6 5.5 0 0.18 1597 631963 73036 12 13134 18 45920 24616 22661 54 66 12364 50 + 0.65381 0.78836 0.41496 0.50257 f210806_01 8A_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14618 105815 0 185109 26501 0 158608 1176 1118 0 58 0.64 4.2 0 0.037 754 752070 59697 7.9 9260 16 43006 15100 12520 35 51 6774 45 + 0.73544 0.87337 0.47403 0.57332 f210806_02 8B_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13124 125968 0 206138 45792 0 160346 5320 4952 0 368 2.6 11 0 0.23 3704 714606 78475 11 14242 18 49840 25318 23038 51 66 12690 50 + 0.72191 0.84129 0.45319 0.53267 f210806_04 6A_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14354 109332 0 189168 29488 0 159680 1925 1709 0 216 1 5.8 0 0.14 1267 772916 64740 8.4 10021 15 44099 16787 14307 38 54 7631 45 + 1.1655 1.2344 0.75447 0.81132 f210806_05 6B_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12046 132290 0 211036 53540 0 157496 5712 5203 0 509 2.7 9.7 0 0.32 3845 670993 84037 13 15843 19 53345 29592 27274 55 70 14812 50 + 1.231 1.3044 0.85309 0.9174 f210806_07 8C_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12300 128480 0 205334 51624 0 153710 7674 7031 0 643 3.7 14 0 0.42 4449 714974 82336 12 14655 18 54543 28766 26535 53 65 14102 49 + 0.83812 0.9577 0.53531 0.61026 f210806_08 8D_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13258 119476 0 190567 48381 0 142186 7298 6650 0 648 3.8 14 0 0.46 4037 699844 76611 11 13709 18 54011 26892 24795 50 65 13361 50 + 0.88911 0.99015 0.57707 0.6539 f210806_10 6C_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11381 132843 0 206861 58823 0 148038 10925 10149 0 776 5.3 17 0 0.52 6305 736561 87293 12 15725 18 60074 33010 31041 55 68 16182 49 + 0.71719 0.84626 0.45646 0.54721 f210806_11 6D_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12594 123075 0 193296 52846 0 140450 9336 8570 0 766 4.8 16 0 0.55 5159 669060 79686 12 14443 18 54180 29156 27072 54 67 14562 50 + 0.70824 0.83882 0.45006 0.54258 f210806_13 8E_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14327 110296 0 183006 37576 0 145430 3579 3294 0 285 2 8.8 0 0.2 2103 780422 69910 9 11425 16 49671 21234 18825 43 58 9925 47 + 0.51403 0.6473 0.32042 0.41519 f210806_14 8F_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 15392 94036 0 158584 29486 0 129098 1779 1588 0 191 1.1 5.4 0 0.15 993 731131 58867 8.1 9043 15 45108 17045 14730 38 53 7578 44 + 0.50139 0.64337 0.3322 0.44015 f210806_16 6E_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13823 114379 0 188794 39956 0 148838 3298 3080 0 218 1.7 7.7 0 0.15 2008 760192 71503 9.4 12101 17 50385 22304 19806 44 58 10652 48 + 0.52705 0.66709 0.33776 0.44622 f210806_17 6F_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 15392 92830 0 157471 28181 0 129290 1423 1297 0 126 0.9 4.6 0 0.097 844 745283 58731 7.9 8928 15 44287 16229 13772 37 52 7268 45 + 0.5769 0.72684 0.3687 0.48021 f210806_19 7A_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13037 120607 0 202729 38481 0 164248 3608 3399 0 209 1.8 8.8 0 0.13 2122 733545 72128 9.8 12183 17 48228 21371 18964 44 58 10149 47 + 0.4674 0.61128 0.30005 0.40406 f210806_20 7B_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10769 137418 0 214945 59883 0 155062 9714 9137 0 577 4.5 15 0 0.37 6604 680672 89193 13 16693 19 58825 33943 31805 58 71 16656 49 + 0.4829 0.63063 0.30097 0.39368 f210806_22 5A_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12901 122298 0 205634 38962 0 166672 3842 3547 0 295 1.9 9.1 0 0.18 2320 752546 73536 9.8 12408 17 50029 21882 19362 44 58 10328 47 + 0.61124 0.75632 0.37587 0.47031 f210806_23 5B_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10703 136767 0 213127 60405 0 152722 9511 8892 0 619 4.5 15 0 0.41 6564 685476 89190 13 16784 19 61025 34600 32403 57 71 16625 48 + 0.55785 0.7082 0.33503 0.42199 f210806_25 7C_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 10834 136716 0 213147 60283 0 152864 10719 9922 0 797 5 16 0 0.52 6131 721678 89322 12 16345 18 61861 33768 31598 55 67 16521 49 + 0.58104 0.73304 0.37174 0.48063 f210806_26 7D_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 12077 126388 0 197709 55057 0 142652 10303 9424 0 879 5.2 17 0 0.62 5685 677567 81792 12 14848 18 57215 31015 28926 54 67 15055 49 + 0.47758 0.63322 0.31846 0.44733 f210806_28 5C_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11589 132970 0 209117 56813 0 152304 10096 9466 0 630 4.8 17 0 0.41 5852 719646 86109 12 15636 18 57673 31798 29560 55 68 15587 49 + 0.45771 0.5992 0.29454 0.3944 f210806_29 5D_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 11929 127557 0 198972 56134 0 142838 9876 9087 0 789 5 16 0 0.55 5524 675376 82780 12 15149 18 57107 31327 29166 55 68 15430 49 + 0.5334 0.68111 0.3457 0.46068 f210806_31 7E_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13579 118748 0 194379 43117 0 151262 4480 4171 0 309 2.3 9.7 0 0.2 2593 771219 74814 9.7 13087 17 51398 23820 21423 46 60 11750 49 + 0.57993 0.72056 0.36411 0.45936 f210806_32 7F_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14668 103871 0 173526 34202 0 139324 1841 1631 0 210 1.1 4.8 0 0.15 1034 740560 64720 8.7 10741 17 47828 19220 16769 40 54 9018 47 + 0.64779 0.80268 0.41683 0.53293 f210806_34 5E_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 13760 115929 0 191314 40544 0 150770 3881 3653 0 228 2 9 0 0.15 2399 815586 72916 8.9 12425 17 53230 22572 20242 42 57 10806 48 + 0.58261 0.71917 0.3653 0.46458 f210806_35 5F_02 1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term);Gln->pyro-Glu;CAMthiopropapanyl(K) Carbamidomethyl (C) False False 1 2 Standard 14172 109185 0 182038 36328 0 145710 1883 1720 0 163 1 4.7 0 0.11 1074 739567 67102 9.1 11497 17 47732 20236 18087 42 56 9608 47 + 0.83995 1.0269 0.56715 0.73413 Total 604818 5853785 0 9328676 2378594 0 6950082 277544 256742 0 20802 3 11 0 0.3 34510 33037474 2574602 1341875 1233925 52 66 644796 48 0.79208 0.94303 0.52766 0.65235