Raw file Experiment Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Fixed modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Max. labeled AAs Labels0 Labels1 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS submitted MS/MS submitted (SIL) MS/MS submitted (ISO) MS/MS submitted (PEAK) MS/MS identified MS/MS identified (SIL) MS/MS identified (ISO) MS/MS identified (PEAK) MS/MS identified [%] MS/MS identified (SIL) [%] MS/MS identified (ISO) [%] MS/MS identified (PEAK) [%] Peptide sequences identified Peaks Peaks sequenced Peaks sequenced [%] Peaks repeatedly sequenced Peaks repeatedly sequenced [%] Isotope patterns Isotope patterns sequenced Isotope patterns sequenced (z>1) Isotope patterns sequenced [%] Isotope patterns sequenced (z>1) [%] Isotope patterns repeatedly sequenced Isotope patterns repeatedly sequenced [%] Multiplets Multiplets z=1 Multiplets z=2 Multiplets z=3 Multiplets z=4 Multiplets z=5 Multiplets z=6 Multiplets z=7 Multiplets sequenced Multiplets sequenced [%] Multiplets repeatedly sequenced Multiplets repeatedly sequenced [%] Multiplets identified Multiplets identified [%] Recalibrated Av. absolute mass deviation [ppm] Mass standard deviation [ppm] Av. absolute mass deviation [mDa] Mass standard deviation [mDa] 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B016 0,02_B016 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5167 71352 0 93281 21320 28103 43858 1954 98 1599 257 2.1 0.46 5.7 0.59 385 619961 62165 10 3735 6 80036 39029 37716 49 53 7306 19 11669 414 2558 5231 2681 754 24 7 9756 84 6979 72 57 0.58 + 0.47346 0.56267 12036 41043 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B007 0,02_B007 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5081 71191 0 92787 20789 28806 43192 2084 126 1675 283 2.2 0.61 5.8 0.66 450 629751 62321 9.9 3543 5.7 82210 39331 38123 48 52 7264 18 11577 387 2144 5137 2914 931 52 12 9632 83 6690 69 72 0.75 + 0.41798 0.50849 7285.2 27250 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B028 0,02_B028 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5117 66058 0 88881 18007 25228 45646 1797 56 1435 306 2 0.31 5.7 0.67 340 543529 56247 10 4128 7.3 65535 32900 31552 50 57 7114 22 8609 309 2174 4019 1688 407 11 1 7498 87 5766 77 35 0.47 + 0.36701 0.4819 11160 30680 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B021 0,02_B021 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5075 72071 0 95051 21431 27660 45960 2141 89 1733 319 2.3 0.42 6.3 0.69 382 627307 62668 10 3694 5.9 80221 38605 37154 48 53 7372 19 11771 324 2586 5350 2641 820 44 6 9865 84 7046 71 46 0.47 + 0.51632 0.58778 2779.2 13181 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B008 0,02_B008 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5062 71354 0 93060 20825 28823 43412 2173 125 1745 303 2.3 0.6 6.1 0.7 464 636708 62475 9.8 3487 5.6 83395 39685 38531 48 52 7052 18 11703 311 2259 5176 2945 940 63 9 9743 83 6818 70 72 0.74 + 0.48423 0.58873 14341 38298 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B040 0,02_B040 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5009 70145 0 93815 19432 27043 47340 2103 104 1771 228 2.2 0.54 6.5 0.48 417 578205 59749 10 4269 7.1 70415 35104 33822 50 55 7802 22 9441 345 1820 4232 2342 671 26 5 8171 87 6128 75 58 0.71 + 0.50453 0.61298 14991 32693 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B029 0,02_B029 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5035 67902 0 90545 19049 26210 45286 1243 56 957 230 1.4 0.29 3.7 0.51 293 557629 58124 10 4022 6.9 69383 34495 33154 50 55 7455 22 9405 331 2252 4398 1987 423 12 2 8154 87 6133 75 37 0.45 + 0.6249 0.80913 30420 60318 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B051 0,02_B051 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5071 71761 0 95555 21616 26351 47588 1691 127 1320 244 1.8 0.59 5 0.51 376 614554 62092 10 4336 7 74221 36383 35233 49 54 8066 22 11012 301 2085 4830 2823 907 61 5 9428 86 6872 73 66 0.7 + 0.57958 0.74585 6670 22841 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B004 0,02_B004 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5149 71367 0 92271 20041 30422 41808 2261 138 1849 274 2.5 0.69 6.1 0.66 567 666615 63181 9.5 3287 5.2 87056 41005 39660 47 51 6897 17 11453 374 2247 5117 2794 859 52 10 9502 83 6686 70 79 0.83 + 0.49477 0.65679 8247 24944 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B010 0,02_B010 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5144 72858 0 95554 21725 28435 45394 2295 193 1777 325 2.4 0.89 6.2 0.72 423 640527 63528 9.9 3625 5.7 84419 39630 38227 47 51 7482 19 12194 365 2351 5449 2978 982 54 15 10056 82 7150 71 86 0.86 + 0.44633 0.60532 13509 37953 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B001 0,02_B001 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5379 72019 0 93615 21311 29110 43194 2213 120 1778 315 2.4 0.56 6.1 0.73 398 646682 63177 9.8 3357 5.3 86763 40312 38888 46 51 7263 18 12202 415 2520 5543 2870 786 56 12 9968 82 7075 71 67 0.67 + 0.45999 0.55532 8197.4 26421 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B035 0,02_B035 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4987 72238 0 96038 20564 27874 47600 1892 119 1447 326 2 0.58 5.2 0.68 315 625552 62048 9.9 4130 6.7 77186 37276 36009 48 52 7750 21 10736 360 2025 4842 2647 817 42 3 9095 85 6605 73 55 0.6 + 0.55168 0.7529 12592 33090 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B042 0,02_B042 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4987 71247 0 94977 21012 26503 47462 1781 98 1423 260 1.9 0.47 5.4 0.55 290 587800 60813 10 4123 6.8 73650 36452 35104 49 54 7736 21 10720 274 2340 4847 2509 714 29 7 9243 86 6875 74 59 0.64 + 0.46366 0.68512 23377 51597 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B024 0,02_B024 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5079 73001 0 96652 21491 27859 47302 2124 155 1652 317 2.2 0.72 5.9 0.67 380 622810 63100 10 3692 5.9 79439 38897 37671 49 53 7354 19 11556 308 2510 5192 2660 837 40 9 9751 84 7081 73 87 0.89 + 0.48749 0.68397 14003 41390 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B049 0,02_B049 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5131 71506 0 95922 21841 25249 48832 2020 86 1632 302 2.1 0.39 6.5 0.62 328 584863 60770 10 4337 7.1 71618 35353 34064 49 54 8097 23 11000 265 2121 4902 2792 862 51 7 9387 85 7021 75 50 0.53 + 0.54595 0.68914 11147 27460 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B052 0,02_B052 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4992 72171 0 96527 21402 26411 48714 1921 114 1508 299 2 0.53 5.7 0.61 373 599561 61295 10 4331 7.1 73222 36250 35031 50 54 7971 22 10855 279 2115 4816 2734 854 51 6 9261 85 6866 74 62 0.67 + 0.58891 0.75401 9732.3 26708 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B048 0,02_B048 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5061 71875 0 95744 21036 26970 47738 2365 141 1898 326 2.5 0.67 7 0.68 490 602989 61607 10 4105 6.7 75034 36613 35398 49 53 7866 21 10664 302 1914 4613 2805 951 67 12 9096 85 6712 74 76 0.84 + 0.43153 0.5969 7411.5 27270 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B002 0,02_B002 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5143 72123 0 94340 20950 28954 44436 2156 97 1759 300 2.3 0.46 6.1 0.68 382 637884 63046 9.9 3517 5.6 84271 39619 38241 47 51 7343 19 11708 350 2400 5270 2832 792 52 12 9762 83 6911 71 61 0.62 + 0.40062 0.50938 15187 42766 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B013 0,02_B013 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5091 70921 0 92557 21358 27927 43272 2149 156 1737 256 2.3 0.73 6.2 0.59 410 622548 62031 10 3691 6 81914 39038 37700 48 52 7354 19 11957 392 2383 5375 2844 908 46 9 9896 83 7083 72 83 0.84 + 0.45036 0.62018 7619.5 26202 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B025 0,02_B025 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4988 68467 0 91950 19336 25648 46966 1941 87 1497 357 2.1 0.45 5.8 0.76 315 546965 58302 11 4038 6.9 68022 34493 33180 51 56 7312 21 9719 292 2302 4637 1969 501 18 0 8384 86 6353 76 53 0.63 + 0.40147 0.56377 21334 53177 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B033 0,02_B033 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4956 71361 0 95442 21061 26219 48162 2019 88 1642 289 2.1 0.42 6.3 0.6 353 587646 61032 10 4218 6.9 73636 35914 34418 49 54 7902 22 10806 366 2219 4818 2584 782 32 5 9192 85 6771 74 53 0.58 + 0.42234 0.52051 18016 43181 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B056 0,02_B056 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5273 62863 0 92661 7255 25808 59598 1951 38 1591 322 2.1 0.52 6.2 0.54 491 505456 50655 10 4618 9.1 49984 23564 20422 47 66 6227 26 3082 456 861 1212 404 149 0 0 2565 83 2086 81 21 0.82 + 0.51244 0.71147 44865 66503 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B045 0,02_B045 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4994 72135 0 96283 21813 26172 48298 1942 130 1447 365 2 0.6 5.5 0.76 351 597011 61535 10 4164 6.8 75025 36627 35334 49 53 7938 22 11287 313 2178 5029 2835 871 51 10 9570 85 7092 74 73 0.76 + 0.49984 0.65238 14100 39571 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B054 0,02_B054 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5013 71933 0 95155 22822 25889 46444 1883 56 1498 329 2 0.25 5.8 0.71 363 605262 61916 10 4037 6.5 75775 37840 36478 50 55 7807 21 11919 354 2913 5443 2482 681 41 5 10246 86 7608 74 35 0.34 + 0.34866 0.44186 15088 34009 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B020 0,02_B020 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5028 71621 0 94211 21727 27300 45184 2059 145 1568 346 2.2 0.67 5.7 0.77 367 624840 62194 10 3783 6.1 80191 38377 37116 48 52 7461 19 11737 392 2368 5234 2765 906 61 11 9826 84 7056 72 81 0.82 + 0.4714 0.55684 11990 37926 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B039 0,02_B039 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4991 69945 0 93648 20443 25799 47406 1913 120 1530 263 2 0.59 5.9 0.55 320 575542 59719 10 4261 7.1 70586 35044 33715 50 55 7755 22 10040 411 1913 4481 2474 730 28 3 8672 86 6481 75 64 0.74 + 0.4705 0.67102 8424 23147 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B026 0,02_B026 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4998 69219 0 92878 19737 25817 47324 2076 127 1643 306 2.2 0.64 6.4 0.65 332 561612 58949 10 4046 6.9 69708 34830 33458 50 56 7402 21 9927 317 2345 4671 2047 523 22 2 8484 85 6474 76 66 0.78 + 0.50929 0.66 8147.2 26196 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B041 0,02_B041 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4931 68593 0 91848 19831 25505 46512 2140 118 1665 357 2.3 0.6 6.5 0.77 343 563907 58544 10 4080 7 69963 34535 33190 49 55 7553 22 9962 362 2106 4572 2327 566 26 3 8578 86 6450 75 66 0.77 + 0.47593 0.61804 21302 46526 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B017 0,02_B017 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5144 72188 0 94458 21936 27982 44540 2089 126 1744 219 2.2 0.57 6.2 0.49 411 627237 62718 10 3818 6.1 81529 39083 37639 48 52 7588 19 12019 384 2466 5342 2880 896 41 10 10005 83 7180 72 68 0.68 + 0.41085 0.50768 11175 31998 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B032 0,02_B032 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4940 71031 0 94562 20378 27122 47062 1705 78 1335 292 1.8 0.38 4.9 0.62 297 594185 60633 10 4167 6.9 73828 36348 35193 49 54 7700 21 10165 280 2100 4583 2438 728 29 7 8809 87 6451 73 47 0.53 + 0.67257 0.84809 6099.5 19047 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B030 0,02_B030 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5045 70432 0 93529 20815 26518 46196 1883 98 1500 285 2 0.47 5.7 0.62 327 592430 60560 10 4046 6.7 74815 36283 34864 48 53 7706 21 10710 378 2407 4928 2362 607 23 5 9145 85 6697 73 55 0.6 + 0.5044 0.68553 16609 37068 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B014 0,02_B014 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5102 71150 0 93863 20881 27556 45426 2081 110 1662 309 2.2 0.53 6 0.68 360 611348 61743 10 3702 6 79183 37780 36340 48 52 7450 20 11413 368 2274 5140 2685 882 52 12 9474 83 6848 72 61 0.64 + 0.43936 0.54806 8999.4 28251 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B053 0,02_B053 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5025 72067 0 96434 22138 25562 48734 2285 127 1822 336 2.4 0.57 7.1 0.69 373 584857 61274 10 4285 7 71657 35964 34696 50 55 8130 23 11149 293 2391 4980 2623 808 45 9 9536 86 7222 76 70 0.73 + 0.44953 0.66637 8019.7 25387 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B005 0,02_B005 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5217 70854 0 92683 20750 28275 43658 2126 114 1715 297 2.3 0.55 6.1 0.68 426 628350 62185 9.9 3461 5.6 82119 39135 37675 48 52 7055 18 11808 422 2351 5274 2824 883 39 15 9784 83 6861 70 65 0.66 + 0.5114 0.73072 10142 27951 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B009 0,02_B009 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5197 70237 0 92038 20647 27789 43602 2098 122 1706 270 2.3 0.59 6.1 0.62 421 611896 61438 10 3631 5.9 79219 38145 36814 48 53 7325 19 11174 300 2221 5140 2680 785 39 9 9389 84 6825 73 73 0.78 + 0.48701 0.59394 10961 31835 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B037 0,02_B037 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4999 70437 0 94403 19885 26586 47932 2106 114 1777 215 2.2 0.57 6.7 0.45 392 566938 59750 11 4256 7.1 70674 35111 33697 50 54 7785 22 9995 358 2020 4379 2459 744 33 2 8544 85 6403 75 56 0.66 + 0.467 0.63519 5914.3 22709 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B015 0,02_B015 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5117 68241 0 89425 20549 26508 42368 1697 116 1260 321 1.9 0.56 4.8 0.76 357 592897 59227 10 3733 6.3 74966 36598 35347 49 54 7312 20 10799 329 2209 4969 2531 726 31 4 9100 84 6602 73 59 0.65 + 0.47934 0.63761 5647.9 18600 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B038 0,02_B038 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4942 71056 0 95933 20734 25445 49754 1841 74 1492 275 1.9 0.36 5.9 0.55 308 573800 59957 10 4402 7.3 70998 34785 33464 49 53 7872 23 10287 253 1995 4530 2633 823 49 4 8846 86 6546 74 48 0.54 + 0.46711 0.56147 8454.4 26914 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B023 0,02_B023 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5126 71362 0 93657 21623 27440 44594 2146 122 1697 327 2.3 0.56 6.2 0.73 361 623753 62159 10 3719 6 79833 38677 37474 48 53 7323 19 11904 351 2461 5418 2759 868 38 9 9882 83 7141 72 78 0.79 + 0.54986 0.73127 14894 46263 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B003 0,02_B003 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5188 70985 0 92197 21285 28488 42424 2083 123 1650 310 2.3 0.58 5.8 0.73 428 629004 62136 9.9 3594 5.8 82826 39554 38256 48 52 7179 18 11891 423 2257 5267 2998 898 40 8 9860 83 6921 70 66 0.67 + 0.5508 0.69691 12264 35997 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B019 0,02_B019 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4968 72520 0 95535 21679 27826 46030 2158 114 1709 335 2.3 0.53 6.1 0.73 404 623685 62627 10 3803 6.1 80456 39000 37704 48 53 7451 19 11879 328 2424 5366 2850 867 39 5 9889 83 7080 72 66 0.67 + 0.50805 0.61258 7110.1 32101 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B047 0,02_B047 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5119 71253 0 94648 21275 26583 46790 2047 103 1656 288 2.2 0.48 6.2 0.62 356 598198 61340 10 4234 6.9 73348 36374 34977 50 54 8032 22 10797 384 2065 4713 2726 852 51 6 9205 85 6826 74 55 0.6 + 0.50171 0.68087 13113 31703 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B034 0,02_B034 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4946 71909 0 96267 20658 26893 48716 1832 87 1509 236 1.9 0.42 5.6 0.48 299 588102 61033 10 4199 6.9 73968 36196 34832 49 53 7770 21 10551 277 2191 4707 2550 775 43 8 8988 85 6624 74 50 0.56 + 0.51291 0.62368 10567 30776 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B050 0,02_B050 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5167 68101 0 93382 13244 29574 50564 2159 52 1800 307 2.3 0.39 6.1 0.61 359 530351 57236 11 4502 7.9 62042 31468 29940 51 58 7574 24 5985 320 1341 2623 1289 400 12 0 5270 88 4092 78 30 0.57 + 0.31126 0.38418 11214 25141 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B031 0,02_B031 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4964 70733 0 94165 20591 26710 46864 2114 97 1704 313 2.2 0.47 6.4 0.67 338 587546 60426 10 4186 6.9 73015 35914 34694 49 53 7759 22 10344 337 2046 4563 2560 795 32 11 8912 86 6508 73 53 0.59 + 0.61271 0.76866 15009 38574 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B044 0,02_B044 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5162 72102 0 96212 20546 27444 48222 2031 106 1602 323 2.1 0.52 5.8 0.67 336 601259 61909 10 4224 6.8 72974 36335 35062 50 54 8068 22 10245 344 1822 4451 2678 886 57 7 8853 86 6541 74 64 0.72 + 0.47629 0.59196 12005 36606 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B036 0,02_B036 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4956 72106 0 96629 21294 26287 49048 1904 143 1449 312 2 0.67 5.5 0.64 323 590473 61128 10 4308 7 73469 36058 34868 49 53 7837 22 10707 313 2023 4697 2707 902 55 10 9131 85 6736 74 65 0.71 + 0.4769 0.66144 13946 38252 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B012 0,02_B012 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5115 71937 0 94623 21187 28064 45372 2230 108 1802 320 2.4 0.51 6.4 0.71 416 631319 62334 9.9 3813 6.1 81041 38513 37328 48 52 7459 19 11540 331 2101 5095 3005 941 57 10 9633 83 6870 71 60 0.62 + 0.44246 0.56317 9991 32586 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B011 0,02_B011 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5136 70736 0 92458 21366 27648 43444 1985 123 1567 295 2.1 0.58 5.7 0.68 357 629351 62060 9.9 3612 5.8 81143 38777 37496 48 52 7288 19 11896 400 2293 5271 2960 922 42 8 9885 83 6944 70 68 0.69 + 0.47351 0.59891 15545 38923 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B055 0,02_B055 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5176 69462 0 87461 6597 44866 35998 2371 59 1912 400 2.7 0.89 4.3 1.1 721 673192 62704 9.3 2449 3.9 88172 44810 43506 51 57 5226 12 3995 230 1117 1690 711 240 7 0 3336 84 2213 66 43 1.3 + 0.40363 0.64089 35535 65707 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B027 0,02_B027 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5114 68152 0 90531 20371 25402 44758 2076 113 1663 300 2.3 0.55 6.5 0.67 349 563443 58670 10 3930 6.7 69993 35119 33875 50 56 7368 21 10346 374 2352 4858 2182 560 19 1 8833 85 6638 75 59 0.67 + 0.48391 0.63896 7174.5 26053 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B018 0,02_B018 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5064 70623 0 92566 19929 28747 43890 2518 123 2093 302 2.7 0.62 7.3 0.69 598 603404 61289 10 3726 6.1 78750 38140 36849 48 53 7554 20 10789 319 2267 4918 2471 763 46 5 9041 84 6479 72 71 0.79 + 0.45935 0.65939 15555 39930 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B046 0,02_B046 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5046 71841 0 96073 21652 25957 48464 2000 114 1575 311 2.1 0.53 6.1 0.64 345 597001 61293 10 4226 6.9 74454 36021 34703 48 53 8044 22 11102 283 2188 4888 2752 925 59 7 9424 85 6992 74 56 0.59 + 0.41205 0.50868 19507 47573 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B006 0,02_B006 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5167 71040 0 91964 20829 29285 41850 2037 123 1616 298 2.2 0.59 5.5 0.71 446 643648 62533 9.7 3412 5.5 85554 40206 38925 47 51 7067 18 12004 316 2450 5403 2850 920 56 9 9887 82 6885 70 66 0.67 + 0.4575 0.65772 6534.5 25919 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B022 0,02_B022 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 5118 71654 0 94519 20688 28101 45730 2172 104 1756 312 2.3 0.5 6.2 0.68 427 617901 62151 10 3817 6.1 79246 38187 36766 48 53 7542 20 11288 369 2447 5130 2505 788 40 9 9419 83 6829 73 64 0.68 + 0.46516 0.65251 10320 34014 220315_C22_010_OE480_PTM_Rev01_#22_015_0,02_B043 0,02_B043 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) False True 2 2 3 light NEM (C) heavy D5 NEM (C) Standard 4982 71412 0 95508 20869 26447 48192 2039 134 1571 334 2.1 0.64 5.9 0.69 311 579507 60735 10 4353 7.2 71142 35571 34420 50 54 8044 23 10410 297 1943 4507 2747 866 44 6 8972 86 6555 73 61 0.68 + 0.53628 0.68058 16743 40011 Total 284174 3964918 0 5256971 1133621 1539200 2584150 114100 6134 91120 16846 2.2 0.54 5.9 0.65 1200 33708791 4253292 2071353 1995993 49 53 420409 20 595903 19030 122231 267266 141788 42974 2230 384 503833 85 367377 73 3397 0.67 0.4813 0.63454 12448 35501