Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages (Trypsin/P) Missed cleavages (GluC) Missed cleavages (ProAlanase) Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type LDS1_1 Identification type LDS1_2 Identification type LDS1_3 Identification type LDS1_4 Identification type LSD1_Nek6_1 Identification type LSD1_Nek6_2 Identification type LSD1_Nek6_3 Identification type LSD1_Nek6_4 Experiment LDS1_1 Experiment LDS1_2 Experiment LDS1_3 Experiment LDS1_4 Experiment LSD1_Nek6_1 Experiment LSD1_Nek6_2 Experiment LSD1_Nek6_3 Experiment LSD1_Nek6_4 Intensity Intensity LDS1_1 Intensity LDS1_2 Intensity LDS1_3 Intensity LDS1_4 Intensity LSD1_Nek6_1 Intensity LSD1_Nek6_2 Intensity LSD1_Nek6_3 Intensity LSD1_Nek6_4 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs Phospho (STY) site IDs Taxonomy IDs MS/MS Count LFQ intensity LDS1_1 LFQ intensity LDS1_2 LFQ intensity LDS1_3 LFQ intensity LDS1_4 LFQ intensity LSD1_Nek6_1 LFQ intensity LSD1_Nek6_2 LFQ intensity LSD1_Nek6_3 LFQ intensity LSD1_Nek6_4 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGER ______________________________ LSGPAEVGPGAVGERTPRKKEPPRASPPGG K A A E R T 19 1 1 0 0 1 5 11 0 0 1 0 0 0 4 3 3 0 0 3 0 0 52 0 5 23 4401.1069 LSD1-FL-His LSD1-FL-His 9 60 yes yes 4 5.52E-13 50.381 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 46261000 4186400 11636000 0 0 10246000 20192000 0 0 0 24 0 0;1;2;3;4;5 0;1 1 2 4186400 11911000 0 0 12360000 22368000 0 0 AAADLISR YDGIKTSDIHETIIKAAADLISRDAPDYQY IHETIIKAAADLISRDAPDYQYLAARLAIF K A A S R D 3 1 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 0 3 815.45012 P00452;P00452-2 P00452 65 72 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 0.0029754 71.501 By MS/MS By matching By matching By MS/MS 1 1 1 1 24876000 6038000 8885200 0 0 5086700 4866500 0 0 1 26 1 6;7;8;9 2;3 2 2 6038000 9094900 0 0 6136100 5391000 0 0 AAAESSIQVK QLTMRTFHIGGAASRAAAESSIQVKNKGSI GAASRAAAESSIQVKNKGSIKLSNVKSVVN R A A V K N 3 0 0 0 0 1 1 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1 3 1002.5346 P0A8T7 P0A8T7 944 953 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.1849E-14 128.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32619000 7195000 9190100 0 0 8506200 7727800 0 0 2 153 2 10;11;12;13 4;5;6;7 4 4 7195000 9407000 0 0 10261000 8560700 0 0 AAAFEGELIPASQIDR LFKEFAKANAKFEVKAAAFEGELIPASQID AAFEGELIPASQIDRLATLPTYEEAIARLM K A A D R L 4 1 0 1 0 1 2 1 0 2 1 0 0 1 1 1 0 0 0 0 0 0 16 0 2 5 1686.8577 P0A7J3 P0A7J3 110 125 rplJ 50S ribosomal protein L10 yes yes 2 3.144E-45 150.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 148240000 31454000 42305000 0 0 36327000 38156000 0 0 3 106 3 14;15;16;17 8;9;10;11 10 4 31454000 43304000 0 0 43821000 42268000 0 0 AAAKHQVALE PGNPKYEIDVKAVAEAAAKHQVALEINNSS KAVAEAAAKHQVALEINNSSFLHSRKGSED E A A L E I 4 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 10 1 0 4 1036.5665 P75914 P75914 147 156 ycdX Probable phosphatase YcdX yes yes 2 0.0024945 68.224 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 123310000 10978000 11211000 16007000 22976000 4511500 4793400 24562000 28268000 4 412 4 18;19;20;21;22;23;24;25 12;13;14;15;16 16 5 168670000 170970000 136010000 174190000 69459000 72652000 189030000 162230000 AAALAAEIHGVK LRTLALLQAELPLKKAAALAAEIHGVKKNA LKKAAALAAEIHGVKKNALYKYALEQQG__ K A A V K K 5 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 12 0 1 5 1149.6506 P67087 P67087 262 273 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2;3 8.4778E-08 120.12 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 64724000 15035000 16732000 0 0 14581000 18377000 0 0 5 400 5 26;27;28;29;30;31;32;33 17;18;19;20;21;22;23;24 21 8 15035000 17127000 0 0 17589000 20358000 0 0 AAALAAEIHGVKK LRTLALLQAELPLKKAAALAAEIHGVKKNA KKAAALAAEIHGVKKNALYKYALEQQG___ K A A K K N 5 0 0 0 0 0 1 1 1 1 1 2 0 0 0 0 0 0 0 1 0 0 13 1 1 5 1277.7456 P67087 P67087 262 274 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 3 3.5434E-08 95.018 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49612000 22414000 12654000 0 0 6734400 7809800 0 0 6 400 6 34;35;36;37 25;26;27;28 25 4 22414000 12953000 0 0 8123800 8651500 0 0 AAALLDAPHARTE RLLPQVSLITPNLPEAAALLDAPHARTEQE PEAAALLDAPHARTEQEMLEQGRSLLAMGC E A A T E Q 5 1 0 1 0 0 1 0 1 0 2 0 0 0 1 0 1 0 0 0 0 0 13 1 0 6 1334.6943 P76422 P76422 143 155 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2;3 6.9227E-12 110.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 192830000 47305000 46619000 11886000 8667700 21888000 26878000 8860100 20724000 7 425 7 38;39;40;41;42;43;44;45;46;47;48;49 29;30;31;32;33;34;35;36;37;38;39;40 30 12 726830000 710940000 101000000 65715000 336990000 407380000 68189000 118930000 AAALLDAPHARTEQE RLLPQVSLITPNLPEAAALLDAPHARTEQE AAALLDAPHARTEQEMLEQGRSLLAMGCGA E A A Q E M 5 1 0 1 0 1 2 0 1 0 2 0 0 0 1 0 1 0 0 0 0 0 15 1 1 6 1591.7954 P76422 P76422 143 157 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2;3 1.0527E-30 127.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 416290000 21216000 20378000 82455000 91385000 26104000 21519000 71907000 81322000 8 425 8 50;51;52;53;54;55;56;57;58;59;60;61;62;63;64;65 41;42;43;44;45;46;47;48;49;50;51;52;53;54;55;56 50 16 325970000 310770000 700610000 692840000 401890000 326160000 553410000 466690000 AAAQVLSSVE DLMLAENTADEDAAEAAAQVLSSVESEIGR EDAAEAAAQVLSSVESEIGRTTDPVRMYMR E A A V E S 3 0 0 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 0 3 973.50803 P00579 P00579 79 88 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0069336 57.281 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 94104000 42411000 8256500 3672600 11757000 0 3333200 12612000 12062000 9 27 9 66;67;68;69;70;71;72;73 57;58;59;60 57 4 603220000 125910000 31206000 89133000 0 50520000 97064000 69224000 AAAQVLSSVESE DLMLAENTADEDAAEAAAQVLSSVESEIGR AAEAAAQVLSSVESEIGRTTDPVRMYMREM E A A S E I 3 0 0 0 0 1 2 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 12 0 1 3 1189.5826 P00579 P00579 79 90 rpoD RNA polymerase sigma factor RpoD yes yes 2 2.4983E-24 137.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 673770000 78998000 88365000 84832000 83999000 45255000 48319000 97549000 146450000 10 27 10 74;75;76;77;78;79;80;81 61;62;63;64;65 61 5 1213800000 1347600000 720810000 636840000 696740000 732340000 750760000 840480000 AAATGEALSLVCVDEHK NVPEDYVHRIGRTGRAAATGEALSLVCVDE ATGEALSLVCVDEHKLLRDIEKLLKKEIPR R A A H K L 4 0 0 1 1 0 2 1 1 0 2 1 0 0 0 1 1 0 0 2 0 0 17 0 2 4 1769.8618 P25888 P25888 339 355 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 2.1695E-24 128.9 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 300960000 72115000 95912000 0 0 57190000 75747000 0 0 11 318 11 82;83;84;85;86;87;88;89;90 66;67;68;69;70;71;72 68 7 72115000 98176000 0 0 68988000 83910000 0 0 AADILFPVISDSIR LFNPQKILIGSPLSKAADILFPVISDSIRQ KAADILFPVISDSIRQQALPAYSQHISVES K A A I R Q 2 1 0 2 0 0 0 0 0 3 1 0 0 1 1 2 0 0 0 1 0 0 14 0 0 3 1515.8297 P50456 P50456 347 360 mlc Protein mlc yes yes 2 0.0053354 49.5 By MS/MS By matching By matching By matching 1 1 1 1 46737000 16606000 12967000 0 0 7631600 9532200 0 0 12 373 12 91;92;93;94 73 73 1 16606000 13273000 0 0 9206000 10560000 0 0 AADMTGADIEAMTR GKISRAQLQEIAQTKAADMTGADIEAMTRS KAADMTGADIEAMTRSIEGTARSMGLVVED K A A T R S 4 1 0 2 0 0 1 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 14 0 1 4 1451.6385 P0A7J7 P0A7J7 114 127 rplK 50S ribosomal protein L11 yes yes 2 1.8325E-13 110.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 85805000 28648000 16834000 0 0 16832000 23490000 0 0 13 107 13 95;96;97;98 74;75;76;77 76 4 28648000 17232000 0 0 20305000 26022000 0 0 AAEEMDER EASPEQILLLAFGRKAAEEMDERIRERLHT LLAFGRKAAEEMDERIRERLHTEDITARTF K A A E R I 2 1 0 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 8 0 3 2 949.38111 P15038 P15038 253 260 helD Helicase IV yes yes 2 0.00033048 85.064 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5246900 1810000 1999200 0 0 917870 519840 0 0 14 281 14 99;100;101;102 78;79 79 1 1810000 2046400 0 0 1107200 575870 0 0 AAEIIHIGQAIMEQK RETKEILGIHCFGERAAEIIHIGQAIMEQK AAEIIHIGQAIMEQKGGGNTIEYFVNTTFN R A A Q K G 3 0 0 0 0 2 2 1 1 4 0 1 1 0 0 0 0 0 0 0 0 0 15 0 2 3 1650.8763 P27306 P27306 417 431 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2;3 1.9686E-108 198.74 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 332410000 83551000 94122000 0 0 80402000 74334000 0 0 15 323 15 103;104;105;106;107;108;109;110 80;81;82;83;84;85;86;87 81 8 83551000 96343000 0 0 96989000 82345000 0 0 AAEKDKVSNQQDDMTKNAQAE AEQAKREAAEQAKREAAEKDKVSNQQDDMT VSNQQDDMTKNAQAEKARREQEAAELKRKA E A A A E K 4 0 2 3 0 3 2 0 0 0 0 3 1 0 0 1 1 0 0 1 0 0 21 3 1 4 2320.0601 P0A705 P0A705 152 172 infB Translation initiation factor IF-2 yes yes 3;4 2.4598E-18 84.946 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 2 1 2 2 77111000 3542100 4141300 13912000 17212000 9557100 8749800 6259800 13737000 16 90 16 111;112;113;114;115;116;117;118;119;120;121;122;123 88;89;90;91;92 91 5 54424000 63155000 118200000 130490000 147140000 132620000 48177000 78836000 AAESLYLTQSAVSFR LKTFLEVSRTRHFGRAAESLYLTQSAVSFR AAESLYLTQSAVSFRIRQLENQLGVNLFTR R A A F R I 3 1 0 0 0 1 1 0 0 0 2 0 0 1 0 3 1 0 1 1 0 0 15 0 1 3 1641.8362 P0A8R9 P0A8R9 21 35 hdfR HTH-type transcriptional regulator HdfR yes yes 2 1.5236E-242 248.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 177310000 43114000 38402000 0 0 52760000 43032000 0 0 17 152 17 124;125;126;127 93;94;95;96 93 4 43114000 39308000 0 0 63644000 47670000 0 0 AAFDDAIAAR LDVNFQAARPPEEVKAAFDDAIAARENEQQ PEEVKAAFDDAIAARENEQQYIREAEAYTN K A A A R E 5 1 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 10 0 0 5 1019.5036 P0ABC7 P0ABC7 249 258 hflK Modulator of FtsH protease HflK yes yes 2 0.0012457 50.04 By matching By MS/MS By MS/MS 1 1 1 9989900 3328200 0 0 0 6661700 0 0 0 18 197 18 128;129;130 97;98 98 2 3328200 0 0 0 8036000 0 0 0 AAFDITQLD ISDAQIKKIIAVIDRAAFDITQLD______ IAVIDRAAFDITQLD_______________ R A A L D - 2 0 0 2 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 0 2 992.48148 P64588 P64588 199 207 yqjI Transcriptional regulator YqjI yes yes 2 0.0021093 78.178 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40964000 7671200 7987100 0 0 9058100 16248000 0 0 19 398 19 131;132;133;134 99;100;101;102 100 4 7671200 8175600 0 0 10927000 17999000 0 0 AAFKPTYER VDPHTGWIIDFAELKAAFKPTYERLDHHYL DFAELKAAFKPTYERLDHHYLNDIPGLENP K A A E R L 2 1 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 9 1 1 3 1081.5556 P65870 P65870 60 68 queD 6-carboxy-5,6,7,8-tetrahydropterin synthase yes yes 3 0.00076318 66.299 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33746000 9770400 12197000 0 0 7057100 4720900 0 0 20 399 20 135;136;137;138 103;104;105;106 104 4 9770400 12485000 0 0 8513000 5229700 0 0 AAGAELVGMEDLADQIK RVAVFTQGANAEAAKAAGAELVGMEDLADQ GAELVGMEDLADQIKKGEMNFDVVIASPDA K A A I K K 4 0 0 2 0 1 2 2 0 1 2 1 1 0 0 0 0 0 0 1 0 0 17 0 2 4 1729.8557 P0A7L0 P0A7L0 89 105 rplA 50S ribosomal protein L1 yes yes 2 1.7015E-29 133.32 By MS/MS By MS/MS By matching 1 1 1 62120000 21677000 17870000 0 0 22573000 0 0 0 21 110 21 139;140;141 107;108 107 2 21677000 18292000 0 0 27229000 0 0 0 AAGASVFALSNR DLFMSIHADGFTNPKAAGASVFALSNRGAS NPKAAGASVFALSNRGASSAMAKYLSEREN K A A N R G 4 1 1 0 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 12 0 0 4 1162.6095 P36548 P36548 142 153 amiA N-acetylmuramoyl-L-alanine amidase AmiA yes yes 2 0.017896 44.425 By matching By MS/MS By matching By matching 1 1 1 1 21249000 5722000 4745600 0 0 4233800 6547100 0 0 22 349 22 142;143;144;145 109 109 0 5722000 4857600 0 0 5107200 7252800 0 0 AAGLHLQESIAEQGALR RLGGNSLLDLVVFGRAAGLHLQESIAEQGA GLHLQESIAEQGALRDASESDVEASLDRLN R A A L R D 4 1 0 0 0 2 2 2 1 1 3 0 0 0 0 1 0 0 0 0 0 0 17 0 2 4 1762.9326 P0AC41 P0AC41 414 430 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 3.1083E-69 130.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 93537000 21679000 15517000 0 0 30000000 26341000 0 0 23 203 23 146;147;148;149 110;111;112;113;114 110 5 21679000 15883000 0 0 36189000 29180000 0 0 AAGSALKGDRKSYQMNPMNRRE YSTKFASSFYGPFREAAGSALKGDRKSYQM GDRKSYQMNPMNRREAIRESLLDEAQGADC E A A R E A 3 3 2 1 0 1 1 2 0 0 1 2 2 0 1 2 0 0 1 0 0 0 22 5 0 4 2479.2172 P0ACB2 P0ACB2 207 228 hemB Delta-aminolevulinic acid dehydratase yes yes 5 0.022615 6.77 By MS/MS By matching 1 1 5845500 0 0 0 0 0 1981800 0 3863700 24 207 24 150;151 115 115 1 0 0 0 0 0 30037000 0 22173000 AAIADGAKPSDLNRPGHVFPLR VTTGVSAADRITTVRAAIADGAKPSDLNRP KPSDLNRPGHVFPLRAQAGGVLTRGGHTEA R A A L R A 4 2 1 2 0 0 0 2 1 1 2 1 0 1 3 1 0 0 0 1 0 0 22 2 0 7 2301.2342 P0A7J0 P0A7J0 120 141 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 3;4;5 3.4849E-153 187.31 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 639580000 180560000 175990000 0 0 122760000 160270000 0 0 25 105 25 152;153;154;155;156;157;158;159;160;161;162;163 116;117;118;119;120;121;122;123;124;125;126;127 125 12 180560000 180150000 0 0 148080000 177540000 0 0 AAIEAAGGK TPVTVRGLRVTKGARAAIEAAGGKIEE___ VTKGARAAIEAAGGKIEE____________ R A A G K I 4 0 0 0 0 0 1 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 9 0 1 4 786.42357 P02413 P02413 133 141 rplO 50S ribosomal protein L15 yes yes 2 1.9837E-06 110.81 By MS/MS By MS/MS By MS/MS 1 1 1 551490000 216010000 242230000 0 0 0 93238000 0 0 26 37 26 164;165;166 128;129;130;131;132;133 132 6 216010000 247950000 0 0 0 103290000 0 0 AAIEAAGGKIEE TPVTVRGLRVTKGARAAIEAAGGKIEE___ GARAAIEAAGGKIEE_______________ R A A E E - 4 0 0 0 0 0 3 2 0 2 0 1 0 0 0 0 0 0 0 0 0 0 12 1 2 4 1157.5928 P02413 P02413 133 144 rplO 50S ribosomal protein L15 yes yes 2 8.8314E-79 155 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 2856000000 913840000 968620000 0 4026800 475200000 494330000 0 0 27 37 27 167;168;169;170;171 134;135;136;137 134 2 913840000 991480000 0 30529000 573240000 547610000 0 0 AAIQGRVAQIRQQIE INKDTTTIIDGVGEEAAIQGRVAQIRQQIE AAIQGRVAQIRQQIEEATSDYDREKLQERV E A A I E E 3 2 0 0 0 4 1 1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 15 2 0 3 1679.9431 P0A6F5 P0A6F5 340 354 groL 60 kDa chaperonin yes yes 3 0.0039215 39.746 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 37397000 0 0 5995300 7969900 6520900 4059100 3580500 9271100 28 68 28 172;173;174;175;176;177 138;139 138 2 0 0 50941000 60424000 100390000 61522000 27556000 53205000 AAIQGRVAQIRQQIEE INKDTTTIIDGVGEEAAIQGRVAQIRQQIE AIQGRVAQIRQQIEEATSDYDREKLQERVA E A A E E A 3 2 0 0 0 4 2 1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 16 2 1 3 1808.9857 P0A6F5 P0A6F5 340 355 groL 60 kDa chaperonin yes yes 2;3 5.6185E-55 185.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 3890300000 321560000 257150000 461880000 765070000 565840000 451250000 358810000 708770000 29 68 29 178;179;180;181;182;183;184;185;186;187;188;189;190;191;192;193 140;141;142;143;144;145;146;147;148;149;150 146 9 4940700000 3921500000 3924500000 5800400000 8711600000 6839400000 2761500000 4067500000 AAIQVSNVAIFNAATGKADRVGFRFE PVPALNQPGGIVEKEAAIQVSNVAIFNAAT NAATGKADRVGFRFEDGKKVRFFKSNSETI E A A F E D 6 2 2 1 0 1 1 2 0 2 0 1 0 3 0 1 1 0 0 3 0 0 26 3 0 6 2751.4456 P60624 P60624 63 88 rplX 50S ribosomal protein L24 yes yes 4 0.013358 17.794 By MS/MS By MS/MS 1 1 9910700 0 0 0 0 4315600 5595000 0 0 30 381 30 194;195 151;152 152 2 0 0 0 0 66443000 84801000 0 0 AAKDVKFGNDA ______________________________ ______________________________ M A A D A R 3 0 1 2 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 1 0 0 11 2 0 2 1134.5669 P0A6F5 P0A6F5 2 12 groL 60 kDa chaperonin yes yes 2 4.0646E-07 109.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 73756000 17211000 17876000 5048400 4674200 0 28139000 0 807990 31 68 31 196;197;198;199;200;201 153 153 1 103890000 106990000 42896000 35437000 0 40112000 0 4636900 AALAAER VNAYEAWEEAEQKRKAALAAERKREEQEQK EEAEQKRKAALAAERKREEQEQK_______ K A A E R K 4 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 1 4 700.38679 P0A9K3 P0A9K3 332 338 ybeZ PhoH-like protein yes yes 2 0.012017 60.788 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 9535400 2847100 4034100 0 0 721140 1933000 0 0 32 168 32 202;203;204;205;206;207 154 154 0 7914000 9837200 0 0 869910 2755400 0 0 AALEIASR HGLQVMTGFTLRPDRAALEIASRVYNGNAT FTLRPDRAALEIASRVYNGNATPRHFLWWA R A A S R V 3 1 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 8 0 1 3 829.46577 P76585 P76585 169 176 yphG Uncharacterized protein YphG yes yes 2 0.00072054 99.919 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 2348500000 465590000 669460000 4477000 5425400 570090000 614440000 8129000 10908000 33 428 33 208;209;210;211;212;213;214;215;216 155;156;157;158 155 4 465590000 685260000 38040000 41133000 687700000 680790000 62563000 62597000 AALELAEQR VVSIREKAKKQSRVKAALELAEQREKPTWL KQSRVKAALELAEQREKPTWLEVDAGKMEG K A A Q R E 3 1 0 0 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 2 3 999.53491 P0A7V8 P0A7V8 157 165 rpsD 30S ribosomal protein S4 yes yes 2 7.9399E-61 178.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1208600000 355320000 287530000 0 0 255930000 309810000 0 0 34 130 34 217;218;219;220 159;160;161;162 161 4 355320000 294320000 0 0 308720000 343200000 0 0 AALLAALR KHILVDEFQDISPQRAALLAALRKQNSQTT QDISPQRAALLAALRKQNSQTTLFAVGDDW R A A L R K 4 1 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 0 4 797.51232 P15038 P15038 447 454 helD Helicase IV yes yes 2 2.7315E-25 149.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 101740000 28095000 27832000 0 0 23899000 21909000 0 0 35 281 35 221;222;223;224 163;164;165;166;167;168;169 165 7 28095000 28489000 0 0 28830000 24271000 0 0 AAMEDVLK LIGTPDEQRVADAWKAAMEDVLKVQDQNQI RVADAWKAAMEDVLKVQDQNQIPELNVYQC K A A L K V 2 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 8 0 1 2 875.44225 P45578 P45578 106 113 luxS S-ribosylhomocysteine lyase yes yes 2 0.002119 77.058 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 25840000 9243800 8907000 0 0 0 7688700 0 0 36 370 36 225;226;227;228 170;171;172 171 3 9243800 9117300 0 0 0 8517300 0 0 AAMRGEIPGLKKASW GFLRKFGLSRIKVREAAMRGEIPGLKKASW AAMRGEIPGLKKASW_______________ E A A S W - 3 1 0 0 0 0 1 2 0 1 1 2 1 0 1 1 0 1 0 0 0 0 15 3 1 4 1613.8712 P0AG59 P0AG59 87 101 rpsN 30S ribosomal protein S14 yes yes 3;4 7.4077E-15 88.561 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 3 3 1 1 329810000 50720000 32198000 84231000 76960000 29347000 48749000 7609700 0 37 260 37;38 229;230;231;232;233;234;235;236;237;238;239;240;241;242;243;244;245;246 173;174;175;176;177;178;179;180;181;182;183;184 180 229 12 779290000 491020000 715700000 583480000 451820000 738870000 58566000 0 AAMVTVAK GIMQKGYTLNGRTIRAAMVTVAKAKA____ LNGRTIRAAMVTVAKAKA____________ R A A A K A 3 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 2 0 0 8 0 0 3 789.44186 P09372 P09372 187 194 grpE Protein GrpE yes yes 2 0.0039751 54.157 By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 8294100 551490 0 0 0 4342200 3400500 0 0 38 62 39 247;248;249;250;251 185;186;187 185 3 8473400 0 0 0 5238000 3766900 0 0 AANIIGIQIEFAK LAKVEGGVVDLNTLKAANIIGIQIEFAKVI LKAANIIGIQIEFAKVILAGEVTTPVTVRG K A A A K V 3 0 1 0 0 1 1 1 0 4 0 1 0 1 0 0 0 0 0 0 0 0 13 0 1 3 1386.7871 P02413 P02413 97 109 rplO 50S ribosomal protein L15 yes yes 2 1.7923E-19 127.92 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 222320000 31461000 31321000 0 0 88499000 71038000 0 0 39 37 40 252;253;254;255;256;257 188;189;190;191;192 190 5 40980000 32061000 0 0 170350000 78694000 0 0 AANSDIVDKLVAEL AVAGAEKIIERSVDEAANSDIVDKLVAEL_ EAANSDIVDKLVAEL_______________ E A A E L - 3 0 1 2 0 0 1 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 14 1 1 3 1456.7773 P0ABA0 P0ABA0 143 156 atpF ATP synthase subunit b yes yes 2 0.010607 62.466 By MS/MS By MS/MS By MS/MS 1 1 1 54669000 0 0 0 0 27524000 22730000 0 4414500 40 192 41 258;259;260 193 193 1 0 0 0 0 423760000 344510000 0 25334000 AAPAAAPAPAAGVKE VAGEAGAAAPAAKQEAAPAAAPAPAAGVKE AAPAAAPAPAAGVKEVNVPDIGGDEVEVTE E A A K E V 8 0 0 0 0 0 1 1 0 0 0 1 0 0 3 0 0 0 0 1 0 0 15 1 0 11 1290.6932 P06959 P06959 194 208 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 2.1452E-14 89.548 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 72822000 6527400 4151900 8559500 7672300 5323600 5460000 14530000 20598000 41 53 42 261;262;263;264;265;266;267;268 194;195;196;197;198;199 195 6 100290000 63318000 72729000 58168000 81961000 82755000 111830000 118210000 AAPNTIPTAAK ALEQGIDAMVSSWNRAAPNTIPTAAKAGGN SWNRAAPNTIPTAAKAGGNYLSSLLVGSEA R A A A K A 4 0 1 0 0 0 0 0 0 1 0 1 0 0 2 0 2 0 0 0 0 0 11 0 0 6 1053.5819 P0AB80 P0AB80 150 160 ilvE Branched-chain-amino-acid aminotransferase yes yes 2 7.7854E-06 105.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33825000 9222100 9408200 0 0 8299500 6895100 0 0 42 191 43 269;270;271;272 200;201;202;203 202 4 9222100 9630300 0 0 10012000 7638200 0 0 AAPSYEELSNSQELLETGIK MKGEIGEEERWAIHRAAPSYEELSNSQELL EELSNSQELLETGIKVIDLMCPFAKGGKVG R A A I K V 2 0 1 0 0 1 4 1 0 1 3 1 0 0 1 3 1 0 1 0 0 0 20 0 4 3 2178.0692 P0ABB4 P0ABB4 113 132 atpD ATP synthase subunit beta yes yes 2 5.5535E-44 173.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43462000 8503500 7944700 0 0 13415000 13599000 0 0 43 194 44 273;274;275;276 204;205;206;207 206 4 8503500 8132200 0 0 16183000 15064000 0 0 AAQQRGDEARANQHLE DHAEQPVVNYLLAAEAAQQRGDEARANQHL AQQRGDEARANQHLERAAELAGNDTIPVEI E A A L E R 4 2 1 1 0 3 2 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 16 2 1 4 1792.8565 P0ACB7 P0ACB7 127 142 hemY Protein HemY yes yes 3 0.00021439 50.806 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 22237000 465600 269690 3525500 4034100 747060 717120 5073600 7404000 44 208 45 277;278;279;280;281;282;283;284 208;209;210;211 208 4 7153700 4112800 29956000 30584000 11502000 10869000 39047000 42490000 AAQSLLLIDK SNAINADYKSMLLKRAAQSLLLIDKSKFNR MLLKRAAQSLLLIDKSKFNRSGEARIGHLD R A A D K S 2 0 0 1 0 1 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 10 0 0 2 1070.6336 P0ACK8 P0ACK8 200 209 fucR L-fucose operon activator yes yes 2 0.00025315 105.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 117700000 34548000 26197000 0 0 23365000 33587000 0 0 45 214 46 285;286;287;288 212;213;214;215;216 212 5 34548000 26816000 0 0 28185000 37207000 0 0 AAQVPVVVAVNK DGVMPQTIEAIQHAKAAQVPVVVAVNKIDK HAKAAQVPVVVAVNKIDKPEADPDRVKNEL K A A N K I 3 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 5 0 0 12 0 0 4 1193.7132 P0A705;P0A705-3;P0A705-2 P0A705 488 499 infB Translation initiation factor IF-2 yes no 2 0.00065561 68.371 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50673000 12283000 10991000 0 0 16211000 11188000 0 0 46 90 47 289;290;291;292 217;218;219;220 217 4 12283000 11250000 0 0 19556000 12393000 0 0 AAQYVASHPGEVCPAK EGIGRDASDLLRKIKAAQYVASHPGEVCPA AQYVASHPGEVCPAKWKEGEATLAPSLDLV K A A A K W 4 0 0 0 1 1 1 1 1 0 0 1 0 0 2 1 0 0 1 2 0 0 16 0 1 6 1683.8039 P0AE08 P0AE08 154 169 ahpC Alkyl hydroperoxide reductase subunit C yes yes 3 0.0089326 30.595 By MS/MS By MS/MS 1 1 7077700 3979700 3098000 0 0 0 0 0 0 47 233 48 293;294 221;222 221 2 3979700 3171100 0 0 0 0 0 0 AARLKGNTGE IYGVLERQFRNYYKEAARLKGNTGENLLAL NYYKEAARLKGNTGENLLALLEGRLDNVVY E A A G E N 2 1 1 0 0 0 1 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 10 2 0 2 1015.5411 P0A7V8 P0A7V8 79 88 rpsD 30S ribosomal protein S4 yes yes 2 0.017875 54.157 By MS/MS 1 807630 0 0 0 0 0 0 0 807630 48 130 49 295 223 223 1 0 0 0 0 0 0 0 4634900 AARVEQRTDLDKLVIE DACYSPVERIAYNVEAARVEQRTDLDKLVI ARVEQRTDLDKLVIEMETNGTIDPEEAIRR E A A I E M 2 2 0 2 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 2 0 0 16 3 1 2 1855.0163 P0A7Z4 P0A7Z4 189 204 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3;4 0.0018265 40.237 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 2 2 38046000 715390 3480200 2154200 1913500 2157100 5824200 8707600 13094000 49 135 50 296;297;298;299;300;301;302;303;304;305;306 224;225;226;227;228 227 5 10992000 53073000 18304000 14507000 33211000 88275000 67016000 75142000 AASEEVINMLSQANPQTR DFRPHRFANEFARSKAASEEVINMLSQANP EEVINMLSQANPQTRFTILRPQSLFGPHDK K A A T R F 3 1 2 0 0 2 2 0 0 1 1 0 1 0 1 2 1 0 0 1 0 0 18 0 2 4 1957.9527 P75821 P75821 145 162 ybjS Uncharacterized protein YbjS yes yes 3 0.00021364 46.621 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18894000 4743500 4175200 0 0 5206200 4769300 0 0 50 408 51 307;308;309;310 229;230;231;232;233;234 233 6 4743500 4273800 0 0 6280300 5283400 0 0 AASIEALK REAIEHEMHHYEDPRAASIEALKIVQKQRG HHYEDPRAASIEALKIVQKQRGWVPDGAIH R A A L K I 3 0 0 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 1 3 801.45962 P0AFD1 P0AFD1 34 41 nuoE NADH-quinone oxidoreductase subunit E yes yes 2 2.6481E-05 113.89 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 1 79759000 18417000 23767000 0 0 17141000 17705000 0 2728300 51 244 52 311;312;313;314;315;316;317;318 235;236;237;238;239;240;241;242 240 8 18417000 29315000 0 0 21488000 20449000 0 15657000 AATEPAHRPAFFR ______________________________ EKAATEPAHRPAFFRTLLESTVWVPGTAAQ K A A F R T 4 2 0 0 0 0 1 0 1 0 0 0 0 2 2 0 1 0 0 0 0 0 13 1 1 6 1469.7528 P0AFZ1 P0AFZ1 15 27 sseB Protein SseB yes yes 4 0.00010884 66.262 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54380000 18638000 16436000 0 0 10115000 9190300 0 0 52 253 53 319;320;321;322 243;244;245;246;247 247 5 18638000 16824000 0 0 12202000 10181000 0 0 AATHDVLAGLTAR TLELPLDSATTESLRAATHDVLAGLTAREA LRAATHDVLAGLTAREAKVLRMRFGIDMNT R A A A R E 4 1 0 1 0 0 0 1 1 0 2 0 0 0 0 0 2 0 0 1 0 0 13 0 0 4 1294.6993 P00579 P00579 542 554 rpoD RNA polymerase sigma factor RpoD yes yes 2;3 5.8462E-101 234.9 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1601900000 650260000 346450000 0 0 229360000 375830000 0 0 53 27 54 323;324;325;326;327;328;329;330 248;249;250;251;252;253;254;255;256 249 9 650260000 354630000 0 0 276670000 416340000 0 0 AATISDGLARVNQAF SLKIQMACCLVATGEAATISDGLARVNQAF AATISDGLARVNQAF_______________ E A A A F - 4 1 1 1 0 1 0 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 1 0 4 1532.7947 P30177 P30177 306 320 ybiB Uncharacterized protein YbiB yes yes 2 8.6066E-104 192.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 274060000 23853000 28936000 31381000 46860000 39964000 34403000 28197000 40466000 54 332 55 331;332;333;334;335;336;337;338 257;258;259;260;261;262;263;264 257 8 366490000 441280000 266640000 355270000 615290000 521430000 217010000 232230000 AATLEDVGRE QREVLARRFGLLGYEAATLEDVGREIGLTR LLGYEAATLEDVGREIGLTRERVRQIQVEG E A A R E I 2 1 0 1 0 0 2 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 10 1 1 2 1059.5197 P13445 P13445 285 294 rpoS RNA polymerase sigma factor RpoS yes yes 2 0.00012427 76.827 By matching By MS/MS By MS/MS 1 1 1 19815000 0 0 4025100 0 0 0 6246800 9543500 55 279 56 339;340;341 265;266 265 2 0 0 34200000 0 0 0 48077000 54768000 AAVAGIAMGLVK CGASLALMDAGVPIKAAVAGIAMGLVKEGD PIKAAVAGIAMGLVKEGDNYVVLSDILGDE K A A V K E 4 0 0 0 0 0 0 2 0 1 1 1 1 0 0 0 0 0 0 2 0 0 12 0 0 4 1099.6424 P05055 P05055 459 470 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 6.4662E-07 111.95 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62715000 16627000 12057000 0 0 12181000 21849000 0 0 56 48 57 342;343;344;345 267;268;269;270 269 4 16627000 12342000 0 0 14694000 24204000 0 0 AAVEEGVVAGGGVALIR KEKKARVEDALHATRAAVEEGVVAGGGVAL VEEGVVAGGGVALIRVASKLADLRGQNEDQ R A A I R V 4 1 0 0 0 0 2 4 0 1 1 0 0 0 0 0 0 0 0 4 0 0 17 0 2 4 1566.873 P0A6F5 P0A6F5 405 421 groL 60 kDa chaperonin yes yes 2;3 5.5711E-29 172.17 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 505350000 95317000 84565000 0 0 166020000 159440000 0 0 57 68 58 346;347;348;349;350;351;352;353;354;355 271;272;273;274;275;276;277;278 277 8 113920000 86561000 0 0 247160000 176630000 0 0 AAVEGGLHQIETA DVDVIDSQSASKLIPAAVEGGLHQIETASG IPAAVEGGLHQIETASGAVLKARSIIVATG P A A T A S 3 0 0 0 0 1 2 2 1 1 1 0 0 0 0 0 1 0 0 1 0 0 13 0 2 2 1294.6517 P35340 P35340 296 308 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 6.77E-05 90.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28740000 1877000 1864100 0 0 17946000 7052800 0 0 58 348 59 356;357;358;359 279 279 1 11331000 11157000 0 0 25550000 10054000 0 0 AAVELAK LFERKLEMHQGHLVKAAVELAKDWRTDRML MHQGHLVKAAVELAKDWRTDRMLRKLEALL K A A A K D 3 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 1 3 700.41194 P0A7B8;P0ACS7 P0A7B8 75 81 hslV;rpiR ATP-dependent protease subunit HslV;HTH-type transcriptional regulator RpiR yes no 2 0.0024849 92.467 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 3 1 1 4 3 1 166840000 43446000 48861000 1703000 1555600 34698000 35024000 1554300 0 59 100 60 360;361;362;363;364;365;366;367;368;369;370;371;372;373;374;375 280;281;282;283;284 280 2 49231000 50014000 14470000 11794000 46165000 38799000 11962000 0 AAVELAVK YEAHHDVRYTAKAVRAAVELAVKYINDRHL YTAKAVRAAVELAVKYINDRHLPDKAIDVI R A A V K Y 3 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 1 3 799.48035 P0ABH9 P0ABH9 380 387 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 2 0.0036386 56.547 By MS/MS 1 0 0 0 0 0 0 0 0 0 60 201 61 376 285 285 1 0 0 0 0 0 0 0 0 AAVHNLLAQR VVVSMVERSGVEACKAAVHNLLAQRVSGLI VEACKAAVHNLLAQRVSGLIINYPLDDQDA K A A Q R V 3 1 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 10 0 0 3 1091.62 B8LFD5;P03023 B8LFD5 112 121 lacI Lactose operon repressor yes no 3 0.0065271 40.386 By MS/MS By MS/MS By matching 1 1 1 18340000 5893000 7212800 0 0 5234200 0 0 0 61 0 62 377;378;379 286;287 287 2 5893000 7383000 0 0 6314000 0 0 0 ACSNIHILR IAALKQFDVVRFAQKACSNIHILRLMREQG VRFAQKACSNIHILRLMREQGVKVDSVSLG K A C L R L 1 1 1 0 1 0 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 0 9 0 0 1 1082.5655 P00861 P00861 55 63 lysA Diaminopimelate decarboxylase yes yes 3 0.00077568 67.993 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31372000 8788900 8264900 0 0 6949300 7368600 0 0 62 28 63 380;381;382;383 288;289;290;291 290 4 8788900 8460000 0 0 8383000 8162700 0 0 ADAFAVIVK QPDIDGALVGGASLKADAFAVIVKAAEAAK GGASLKADAFAVIVKAAEAAKQA_______ K A D V K A 3 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 9 0 0 3 932.53312 P0A858 P0A858 239 247 tpiA Triosephosphate isomerase yes yes 2 0.00047228 96.492 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 166020000 37466000 35619000 2540100 1750600 37859000 43342000 0 7440500 63 139 64 384;385;386;387;388;389;390;391;392 292;293;294;295 292 4 49580000 45673000 21583000 13272000 45670000 48014000 0 42700000 ADAGAIVAQLR GETETGVTLHRMVKRADAGAIVAQLRIAIA MVKRADAGAIVAQLRIAIAPDDIAITLHHK R A D L R I 4 1 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 0 4 1083.6037 P77398 P77398 139 149 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 2.7217E-65 210.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6372300000 1628900000 1209000000 0 0 1439200000 2095200000 0 0 64 432 65 393;394;395;396 296;297;298;299;300 296 5 1628900000 1237600000 0 0 1736100000 2321000000 0 0 ADALRTLA VLIVEGHKAQEEDLPADALRTLALLQAELP AQEEDLPADALRTLALLQAELPLKKAAALA P A D L A L 3 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 1 0 2 829.46577 P67087 P67087 244 251 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2 0.013277 69.825 By MS/MS 1 4145800 0 0 0 0 0 4145800 0 0 65 400 66 397 301 301 1 0 0 0 0 0 5909900 0 0 ADAVVVLENDLHR GGSLEEALTELETGRADAVVVLENDLHRHA GRADAVVVLENDLHRHASAIRVNAALAKAP R A D H R H 2 1 1 2 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 3 0 0 13 0 1 2 1449.7576 P33602 P33602 561 573 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 7.0089E-27 137.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 390220000 124460000 85750000 0 0 80973000 99037000 0 0 66 345 67 398;399;400;401;402;403;404;405 302;303;304;305;306;307;308;309;310 306 9 124460000 87774000 0 0 97678000 109710000 0 0 ADCRATLGE YVTLRLRSGEMRKVEADCRATLGEVGNAEH EMRKVEADCRATLGEVGNAEHMLRVLGKAG E A D G E V 2 1 0 1 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 1 0 2 991.43929 P60422 P60422 186 194 rplB 50S ribosomal protein L2 yes yes 2 0.020978 55.549 By MS/MS By MS/MS By MS/MS 1 1 1 4476000 1341400 0 0 0 1209100 1925400 0 0 67 379 68 406;407;408 311 311 1 20611000 0 0 0 18616000 29183000 0 0 ADEYLLQQLDDTEIRGP FPATDDVNPLQAWEAADEYLLQQLDDTEIR EYLLQQLDDTEIRGPVLILNDAFGALSCAL A A D G P V 1 1 0 3 0 2 2 1 0 1 3 0 0 0 1 0 1 0 1 0 0 0 17 1 2 1 1974.9535 P42596 P42596 31 47 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 1.7277E-23 128.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11608000 676180 1001300 0 0 4615500 5315200 0 0 68 366 69 409;410;411;412 312;313 313 2 4081800 5992800 0 0 6571000 7576900 0 0 ADFLSDPNK HGYFQPYKSLSDITKADFLSDPNKITPVFV LSDITKADFLSDPNKITPVFVRFSTVQGGA K A D N K I 1 0 1 2 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 9 0 0 2 1005.4767 P21179 P21179 150 158 katE Catalase HPII yes yes 2 1.7125E-19 140.09 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 195680000 53634000 39639000 0 1796500 42003000 58610000 0 0 69 293 70 413;414;415;416;417 314;315;316;317 316 4 53634000 40575000 0 13620000 50668000 64927000 0 0 ADFLSDPNKITPVFVR HGYFQPYKSLSDITKADFLSDPNKITPVFV DFLSDPNKITPVFVRFSTVQGGAGSADTVR K A D V R F 1 1 1 2 0 0 0 0 0 1 1 1 0 2 2 1 1 0 0 2 0 0 16 1 0 3 1817.9676 P21179 P21179 150 165 katE Catalase HPII yes yes 3 0.00013805 61.444 By matching By MS/MS By MS/MS By matching 1 1 1 1 23616000 9878100 5516900 0 0 4190700 4030100 0 0 70 293 71 418;419;420;421 318 318 1 9878100 5647100 0 0 5055300 4464400 0 0 ADGLLPASSK DRIRQAIRGIKAMFRADGLLPASSKHIHEN KAMFRADGLLPASSKHIHENAE________ R A D S K H 2 0 0 1 0 0 0 1 0 0 2 1 0 0 1 2 0 0 0 0 0 0 10 0 0 3 957.51311 P77434 P77434 396 405 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 6.828E-07 108.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 134590000 32550000 42430000 0 0 28080000 31532000 0 0 71 433 72 422;423;424;425 319;320;321;322 320 4 32550000 43432000 0 0 33873000 34930000 0 0 ADIDYNTSEAHTTYGVIGVK TEWYREGRVPLHTLRADIDYNTSEAHTTYG NTSEAHTTYGVIGVKVWIFKGEILGGMAAV R A D V K V 2 0 1 2 0 0 1 2 1 2 0 1 0 0 0 1 3 0 2 2 0 0 20 0 1 2 2153.0277 P0A7V3 P0A7V3 180 199 rpsC 30S ribosomal protein S3 yes yes 2;3 1.308E-31 120.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 225460000 53876000 59537000 0 0 57418000 54628000 0 0 72 129 73 426;427;428;429;430;431 323;324;325;326;327;328 323 6 53876000 60942000 0 0 69263000 60516000 0 0 ADKPLVGTGMER LMGANMQRQAVPTLRADKPLVGTGMERAVA TLRADKPLVGTGMERAVAVDSGVTAVAKRG R A D E R A 1 1 0 1 0 0 1 2 0 0 1 1 1 0 1 0 1 0 0 1 0 0 12 1 1 2 1272.6496 P0A8V2 P0A8V2 695 706 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.00073948 61.11 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22723000 7451800 5031500 0 0 5865300 4374800 0 0 73 154 74 432;433;434;435 329;330;331;332 332 3 7451800 5150300 0 0 7075400 4846300 0 0 ADLEMQIESLTEELAYLK INGLRRVLDELTLTKADLEMQIESLTEELA EMQIESLTEELAYLKKNHEEEMKDLRNVST K A D L K K 2 0 0 1 0 1 4 0 0 1 4 1 1 0 0 1 1 0 1 0 0 0 18 0 4 2 2095.0395 CON__P13645 CON__P13645 267 284 yes yes 2 0.00026511 53.448 By MS/MS By matching 1 1 69784000 0 0 0 0 66788000 2996000 0 0 + 74 12 75 436;437 333 333 12 1 0 0 0 0 80566000 3318900 0 0 ADLEMQIESLTEELAYLKK INGLRRVLDELTLTKADLEMQIESLTEELA MQIESLTEELAYLKKNHEEEMKDLRNVSTG K A D K K N 2 0 0 1 0 1 4 0 0 1 4 2 1 0 0 1 1 0 1 0 0 0 19 1 4 2 2223.1345 CON__P13645 CON__P13645 267 285 yes yes 3 2.0813E-91 179.46 By matching By MS/MS 1 2 89975000 0 0 0 0 38419000 51556000 0 0 + 75 12 76;77 438;439;440 334;335 335 12 2 0 0 0 0 46345000 57113000 0 0 ADNGRKGPLNLPNLTRLGLAKAHE ADTLGHIAEACAKGEADNGRKGPLNLPNLT NLPNLTRLGLAKAHEGSTGFIPAGMDGNAE E A D H E G 3 2 3 1 0 0 1 3 1 0 5 2 0 0 2 0 1 0 0 0 0 0 24 4 0 5 2554.4092 P0A6K6 P0A6K6 43 66 deoB Phosphopentomutase yes yes 5 0.013075 15.316 By matching By MS/MS By MS/MS 1 1 1 6487700 822430 0 0 0 2353000 3312200 0 0 76 75 78 441;442;443 336;337 336 2 12636000 0 0 0 36227000 50202000 0 0 ADNKSLGQFNLDGINP SAVTIHVLQGERKRAADNKSLGQFNLDGIN DNKSLGQFNLDGINPAPRGMPQIEVTFDID A A D N P A 1 0 3 2 0 1 0 2 0 1 2 1 0 1 1 1 0 0 0 0 0 0 16 1 0 1 1701.8322 P0A6Y8 P0A6Y8 449 464 dnaK Chaperone protein DnaK yes yes 2 0.0010332 57.019 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13783000 1545500 1815000 0 0 3634500 6787800 0 0 77 86 79 444;445;446;447 338 338 1 9329200 10863000 0 0 5174300 9676000 0 0 ADQVLQDK IVEHVTLLEFAPEMKADQVLQDKLRSLKNV EFAPEMKADQVLQDKLRSLKNVDIILNAQT K A D D K L 1 0 0 2 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 0 1 915.46616 P35340 P35340 392 399 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.5293E-25 151.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 676950000 218800000 198280000 0 0 145460000 114400000 0 0 78 348 80 448;449;450;451 339;340;341;342;343;344 344 6 218800000 202960000 0 0 175470000 126730000 0 0 ADQYGTTVIAGE LCLYCHDHEHSKYTEADQYGTTVIAGEDAQ YTEADQYGTTVIAGEDAQKDVGEAKYNPFA E A D G E D 2 0 0 1 0 1 1 2 0 1 0 0 0 0 0 0 2 0 1 1 0 0 12 0 0 2 1223.567 P0AAQ2 P0AAQ2 79 90 yajD Uncharacterized protein YajD yes yes 2 7.6868E-10 93.649 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 100230000 21861000 21338000 13082000 15127000 7087100 7079700 14654000 0 79 188 81 452;453;454;455;456;457;458 345;346;347 346 3 335890000 325410000 111150000 114690000 109110000 107300000 112780000 0 ADQYGTTVIAGEDAQKDVGE LCLYCHDHEHSKYTEADQYGTTVIAGEDAQ TTVIAGEDAQKDVGEAKYNPFADLKAMMNK E A D G E A 3 0 0 3 0 2 2 3 0 1 0 1 0 0 0 0 2 0 1 2 0 0 20 1 1 3 2065.944 P0AAQ2 P0AAQ2 79 98 yajD Uncharacterized protein YajD yes yes 2 9.3525E-41 169.94 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 370610000 23082000 21205000 76528000 68256000 26649000 20032000 72638000 62218000 80 188 82 459;460;461;462;463;464;465;466 348;349;350;351;352;353;354;355 350 8 354650000 323380000 650250000 517490000 410280000 303620000 559040000 357060000 ADRKFEE DEIQKMVRDAEANAEADRKFEELVQTRNQG RDAEANAEADRKFEELVQTRNQGDHLLHST E A D E E L 1 1 0 1 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 7 2 1 1 893.4243 P0A6Y8 P0A6Y8 525 531 dnaK Chaperone protein DnaK yes yes 2 0.020263 60.76 By MS/MS 1 8033500 8033500 0 0 0 0 0 0 0 81 86 83 467 356 356 0 123430000 0 0 0 0 0 0 0 ADTLTDEINFLR DVDAAYMNKVELQAKADTLTDEINFLRALY QAKADTLTDEINFLRALYDAELSQMQTHIS K A D L R A 1 1 1 2 0 0 1 0 0 1 2 0 0 1 0 0 2 0 0 0 0 0 12 0 1 1 1406.7042 CON__P48668;CON__P04259;CON__P02538 CON__P48668 288 299 yes no 2 1.9325E-07 102.06 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 29130000 7336900 5241800 0 0 8927400 7624100 0 0 + 82 5 84 468;469;470;471 357;358;359 358 3 7336900 5365500 0 0 10769000 8445800 0 0 ADVLPLDSNHVNTEEAR GEIEVLASSLTIINRADVLPLDSNHVNTEE VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ R A D A R L 2 1 2 2 0 0 2 0 1 0 2 0 0 0 1 1 1 0 0 2 0 0 17 0 2 3 1878.9072 P21889 P21889 105 121 aspS Aspartate--tRNA ligase yes yes 3 0.0024544 33.697 By MS/MS 1 0 0 0 0 0 0 0 0 0 83 298 85 472 360 360 1 0 0 0 0 0 0 0 0 ADVQGSVEAISDSLLK NMTEGEVHEVNIVLKADVQGSVEAISDSLL DVQGSVEAISDSLLKLSTDEVKVKIIGSGV K A D L K L 2 0 0 2 0 1 1 1 0 1 2 1 0 0 0 3 0 0 0 2 0 0 16 0 1 2 1630.8414 P0A705;P0A705-3;P0A705-2 P0A705 695 710 infB Translation initiation factor IF-2 yes no 2 4.3108E-19 135.6 By MS/MS By MS/MS 1 1 19863000 0 0 0 0 7525700 12338000 0 0 84 90 86 473;474 361;362 361 2 0 0 0 0 9078300 13667000 0 0 ADVRGRTGFE WRKPQRVEQLALTSEADVRGRTGFESADYP ALTSEADVRGRTGFESADYPQGRWLREAWE E A D F E S 1 2 0 1 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 1 0 0 10 2 0 1 1106.5469 P06961 P06961 344 353 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 3 0.015996 34.692 By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 17272000 0 641220 3253700 5331200 0 0 3011100 5034600 85 54 87 475;476;477;478;479 363 363 0 0 9778700 27646000 40419000 0 0 23174000 28893000 ADWEQVK HDFRQLEKYLEPIPKADWEQVKAYYYAM__ KYLEPIPKADWEQVKAYYYAM_________ K A D V K A 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 7 0 1 1 874.41848 P27294 P27294 204 210 inaA Protein InaA yes yes 2 0.0047685 63.287 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 1 2 2 1 1 187280000 20334000 21047000 13235000 12586000 70973000 43110000 2352600 3647200 86 321 88 480;481;482;483;484;485;486;487;488;489;490;491 364;365 364 2 72415000 83641000 112460000 95419000 98814000 58926000 18106000 20931000 AEAAEINLR TLCVEVADKAGVLTRAEAAEINLRSDILNA AGVLTRAEAAEINLRSDILNAVGITLDETT R A E L R S 3 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 2 3 985.51926 P33195 P33195 405 413 gcvP Glycine dehydrogenase (decarboxylating) yes yes 2 0.00057809 60.59 By MS/MS 1 0 0 0 0 0 0 0 0 0 87 344 89 492 366 366 1 0 0 0 0 0 0 0 0 AEAESLYQSK AEVKAQNEDIAQKSKAEAESLYQSKYEELQ AQKSKAEAESLYQSKYEELQITAGRHGDSV K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 2 2 1124.535 CON__P04264 CON__P04264 367 376 yes yes 2 2.0678E-61 172.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 338220000 38937000 39685000 0 0 125500000 134110000 0 0 + 88 9 90 493;494;495;496 367;368;369;370 367 4 38937000 40621000 0 0 151390000 148560000 0 0 AEAFVTMR MVDVSAKAETVREARAEAFVTMRSETLAMI ETVREARAEAFVTMRSETLAMIIDGRHHKG R A E M R S 2 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 8 0 1 2 923.45349 P0A738 P0A738 30 37 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 1.3732E-25 151.29 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 133870000 45941000 31637000 0 0 26720000 29573000 0 0 89 93 91;92 497;498;499;500;501;502;503;504 371;372;373;374;375;376;377;378;379 375 102 9 45941000 32384000 0 0 32232000 32761000 0 0 AEAPAAAPAAK APAKQEAAAPAPAAKAEAPAAAPAAKAEGK PAAKAEAPAAAPAAKAEGKSEFAENDAYVH K A E A K A 7 0 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 11 0 1 9 966.51345 P06959 P06959 303 313 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.0010776 68.224 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 1 15579000 2764600 4165500 0 0 4270600 3277400 0 1100500 90 53 93 505;506;507;508;509;510 380;381;382 381 3 2764600 15843000 0 0 5151700 3630600 0 6315600 AEAQVIIEQANK DLAKASATDQLKKAKAEAQVIIEQANKRRS KAKAEAQVIIEQANKRRSQILDEAKAEAEQ K A E N K R 3 0 1 0 0 2 2 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 12 0 2 3 1312.6987 P0ABA0 P0ABA0 70 81 atpF ATP synthase subunit b yes yes 2 0.019137 37.995 By MS/MS By MS/MS 1 1 6892900 0 0 0 0 3310800 3582100 0 0 91 192 94 511;512 383 383 1 0 0 0 0 3993900 3968200 0 0 AEATILADIAHQFWHIPHEK IAQHPHYNTIRTTGRAEATILADIAHQFWH LADIAHQFWHIPHEKIWIEDQSTNCGENAR R A E E K I 4 0 0 1 0 1 2 0 3 3 1 1 0 1 1 0 1 1 0 0 0 0 20 0 2 5 2326.1859 P34209 P34209 97 116 ydcF Protein YdcF yes yes 4 0.00039238 39.523 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 100730000 30261000 21498000 0 0 20541000 28431000 0 0 92 347 95 513;514;515;516 384;385;386;387 387 4 30261000 22005000 0 0 24779000 31496000 0 0 AEDHNNQHAPLFLQQLR RMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ DHNNQHAPLFLQQLRNLILSSPLADEKLWV R A E L R N 2 1 2 1 0 3 1 0 2 0 3 0 0 1 1 0 0 0 0 0 0 0 17 0 1 3 2030.0082 P17888 P17888 641 657 priA Primosomal protein N yes yes 4 1.2374E-07 59.513 By MS/MS By MS/MS By matching 1 1 1 57389000 23995000 17395000 0 0 15999000 0 0 0 93 290 96 517;518;519 388;389;390 388 3 23995000 17805000 0 0 19300000 0 0 0 AEDITRRMP ASNSLLECLVYGWSAAEDITRRMPYAHDIS VYGWSAAEDITRRMPYAHDISTLPPWDESR A A E M P Y 1 2 0 1 0 0 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 9 2 1 1 1087.5444 P10902 P10902 403 411 nadB L-aspartate oxidase yes yes 3 0.018084 33.797 By matching By MS/MS By MS/MS 1 1 2 4861100 327900 0 0 0 2706000 1827200 0 0 94 274 97 520;521;522;523 391 391 1 1979400 0 0 0 3852500 2412500 0 0 AEDLSAHLMR TPMGRSKGGAFRNVRAEDLSAHLMRSLLAR FRNVRAEDLSAHLMRSLLARNPALEAAALD R A E M R S 2 1 0 1 0 0 1 0 1 0 2 0 1 0 0 1 0 0 0 0 0 0 10 0 1 2 1141.555 P21151 P21151 27 36 fadA 3-ketoacyl-CoA thiolase yes yes 3 0.00095889 60.518 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36630000 8809000 9892300 0 0 8390600 9538600 0 0 95 292 98 524;525;526;527 392;393;394;395 395 4 8809000 10126000 0 0 10122000 10567000 0 0 AEELAEER VKMVRVQAIEKNRYRAEELAEERILDVLIP IEKNRYRAEELAEERILDVLIPPAKNNWGQ R A E E R I 2 1 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 4 2 945.44034 P0A6H5 P0A6H5 123 130 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0016605 81.296 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10069000 4102100 0 0 0 2979000 2988000 0 0 96 71 99 528;529;530;531 396;397;398;399 397 4 4102100 0 0 0 3593600 3310000 0 0 AEFETTFADLGLK ______________________________ ______________________________ M A E L K A 2 0 0 1 0 0 2 1 0 0 2 1 0 2 0 0 2 0 0 0 0 0 13 0 2 2 1440.7137 P0A9P6 P0A9P6 2 14 deaD ATP-dependent RNA helicase DeaD yes yes 2 2.6379E-08 104.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26763000 6331300 5795800 0 0 7802200 6834100 0 0 97 173 100 532;533;534;535 400;401;402;403 403 4 6331300 5932600 0 0 9411800 7570600 0 0 AEFQIIISPEYQGK AGLVELVEINHVHRRAEFQIIISPEYQGKG RAEFQIIISPEYQGKGLATRAAKLAMDYGF R A E G K G 1 0 0 0 0 2 2 1 0 3 0 1 0 1 1 1 0 0 1 0 0 0 14 0 2 2 1621.8352 P0A951 P0A951 84 97 speG Spermidine N(1)-acetyltransferase yes yes 2 2.274E-13 108.37 By MS/MS By MS/MS By MS/MS 1 1 1 24151000 6919800 6101300 0 0 0 11130000 0 0 98 160 101 536;537;538 404;405;406;407 405 4 6919800 6245300 0 0 0 12330000 0 0 AEFTYQR RCALDISGRPHLEYKAEFTYQRVGDLSTEM GRPHLEYKAEFTYQRVGDLSTEMIEHFFRS K A E Q R V 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 7 0 1 1 913.42938 P06987 P06987 283 289 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 6.5179E-17 135.87 By MS/MS By MS/MS By matching By matching 1 1 1 1 428170000 113660000 115510000 0 0 96050000 102950000 0 0 99 55 102 539;540;541;542 408;409 408 2 113660000 118240000 0 0 115870000 114050000 0 0 AEIEGEIGDSHMGLAAR VDVIVVDSVAALTPKAEIEGEIGDSHMGLA IEGEIGDSHMGLAARMMSQAMRKLAGNLKQ K A E A R M 3 1 0 1 0 0 3 3 1 2 1 0 1 0 0 1 0 0 0 0 0 0 17 0 3 3 1754.8257 P0A7G6 P0A7G6 154 170 recA Protein RecA yes yes 2;3 9.1901E-17 116.01 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 94501000 24125000 22688000 0 0 19987000 27701000 0 0 100 104 103 543;544;545;546;547;548;549;550;551;552;553;554 410;411;412;413;414;415;416;417 414 8 72094000 64407000 0 0 56720000 67311000 0 0 AEISMLEGAVLDIR IADKHNMLGGCPKERAEISMLEGAVLDIRY RAEISMLEGAVLDIRYGVSRIAYSKDFETL R A E I R Y 2 1 0 1 0 0 2 1 0 2 2 0 1 0 0 1 0 0 0 1 0 0 14 0 2 2 1515.7967 GST-Nek6 GST-Nek6 90 103 yes yes 2 2.1374E-50 136.96 By MS/MS By MS/MS 2 2 33943000 0 0 0 0 20028000 13916000 0 0 101 23 104;105 555;556;557;558 418;419;420 420 31 2 0 0 0 0 91995000 15416000 0 0 AELLQYQLK DLAHHQQLSQERAARAELLQYQLKELNEFN QERAARAELLQYQLKELNEFNPQPGEFEQI R A E L K E 1 0 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 9 0 1 1 1104.6179 P05824 P05824 187 195 recN DNA repair protein RecN yes yes 2 0.00098769 102.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75414000 23558000 18249000 0 0 15681000 17925000 0 0 102 49 106 559;560;561;562 421;422;423;424 422 4 23558000 18679000 0 0 18916000 19857000 0 0 AEMENLR AEAQTRERDGILRVKAEMENLRRRTELDIE RDGILRVKAEMENLRRRTELDIEKAHKFAL K A E L R R 1 1 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 7 0 2 1 861.40145 P09372 P09372 67 73 grpE Protein GrpE yes yes 2 0.0035493 70.912 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 12031000 2795100 3671500 0 0 2792700 1953500 0 818170 103 62 107 563;564;565;566;567 425;426;427 426 3 2795100 3758200 0 0 3368800 2164000 0 4695300 AENIGAAAR ______________________________ LVAPARAENIGAAARAMKTMGFSDLRIVDS R A E A R A 4 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 9 0 1 4 871.45118 P37005 P37005 13 21 lasT Uncharacterized tRNA/rRNA methyltransferase LasT yes yes 2 0.0021143 79.469 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 18542000 5086800 6667700 0 0 3953100 2834300 0 0 104 353 108 568;569;570;571;572 428;429;430;431 430 4 5086800 20839000 0 0 4768700 3139800 0 0 AENIKGL MELKVKTLRYFNELEAENIKGL________ LRYFNELEAENIKGL_______________ E A E G L - 1 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 1 1 1 743.41775 P0A759 P0A759 260 266 nagB Glucosamine-6-phosphate deaminase yes yes 2 0.011069 67.741 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 1 122000000 15055000 13549000 26953000 19974000 10737000 12606000 23131000 0 105 96 109 573;574;575;576;577;578;579;580;581;582 432;433 433 2 224480000 206620000 229010000 151430000 156960000 166960000 178020000 0 AENQYYGTGR ______________________________ ______________________________ M A E G R R 1 1 1 0 0 1 1 2 0 0 0 0 0 0 0 0 1 0 2 0 0 0 10 0 1 1 1157.5102 P0A7X3 P0A7X3 2 11 rpsI 30S ribosomal protein S9 yes yes 2 3.5112E-28 146.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 347040000 84224000 107400000 0 0 77276000 78146000 0 0 106 133 110 583;584;585;586 434;435;436;437 434 4 84224000 109930000 0 0 93218000 86568000 0 0 AENQYYGTGRRKSSAA ______________________________ ENQYYGTGRRKSSAARVFIKPGNGKIVINQ M A E A A R 3 2 1 0 0 1 1 2 0 0 0 1 0 0 0 2 1 0 2 0 0 0 16 3 1 2 1757.8445 P0A7X3 P0A7X3 2 17 rpsI 30S ribosomal protein S9 yes yes 3 0.0019255 43.184 By MS/MS By MS/MS By MS/MS 1 1 1 9386700 2010800 2969000 0 0 0 4406900 0 0 107 133 111 587;588;589 438;439 438 2 12138000 17770000 0 0 0 6282100 0 0 AERLTGLEP KPRFLWIGCSDSRVPAERLTGLEPGELFVH SDSRVPAERLTGLEPGELFVHRNVANLVIH P A E E P G 1 1 0 0 0 0 2 1 0 0 2 0 0 0 1 0 1 0 0 0 0 0 9 1 2 1 984.52401 P61517 P61517 49 57 can Carbonic anhydrase 2 yes yes 2 8.7875E-05 96.492 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 386790000 25692000 27705000 0 0 204560000 128840000 0 0 108 386 112 590;591;592;593 440;441;442 442 1 155090000 165820000 0 0 291230000 183660000 0 0 AESLYQSKYEE VKAQNEDIAQKSKAEAESLYQSKYEELQIT SKAEAESLYQSKYEELQITAGRHGDSVRNS E A E E E L 1 0 0 0 0 1 3 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 11 1 2 1 1345.6038 CON__P04264 CON__P04264 369 379 yes yes 2 0.0030058 67.897 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 27989000 2398100 0 0 1973400 3479700 4664000 5701900 9771600 + 109 9 113 594;595;596;597;598;599;600;601 443;444 444 2 32722000 0 0 14962000 53574000 47152000 43883000 56078000 AETLLAK NARLFALHDHNEQQKAETLLAKLQEGQNIA HDHNEQQKAETLLAKLQEGQNIALVSDAGT K A E A K L 2 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 7 0 1 2 744.43815 P67087 P67087 74 80 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2 0.0035493 70.912 By MS/MS 1 15203000 15203000 0 0 0 0 0 0 0 110 400 114 602 445 445 1 15203000 0 0 0 0 0 0 0 AETLYYIVK HKYPSKSTLIHQGEKAETLYYIVKGSVAVL IHQGEKAETLYYIVKGSVAVLIKDEEGKEM K A E V K G 1 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 2 1 0 0 9 0 1 1 1098.5961 P0ACJ8 P0ACJ8 37 45 crp cAMP-activated global transcriptional regulator CRP yes yes 1;2 6.1452E-20 138.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 10895000000 2642900000 2886400000 0 0 2492900000 2873000000 0 0 111 213 115 603;604;605;606;607;608;609;610;611 446;447;448;449;450;451;452 450 7 2642900000 2954600000 0 0 3063000000 3182700000 0 0 AEYTPHVDTGDYIIVLNADK RLATELARRLRGKHKAEYTPHVDTGDYIIV HVDTGDYIIVLNADKVAVTGNKRTDKVYYH K A E D K V 2 0 1 3 0 0 1 1 1 2 1 1 0 0 1 0 2 0 2 2 0 0 20 0 1 3 2233.0903 P0AA10 P0AA10 42 61 rplM 50S ribosomal protein L13 yes yes 2;3 5.0927E-107 227.41 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 819970000 239220000 284850000 0 0 25487000 270420000 0 0 112 182 116 612;613;614;615;616;617;618;619;620 453;454;455;456;457;458;459;460 460 8 239220000 291570000 0 0 30745000 299560000 0 0 AFDQIDNAPEEK AITTVLAKTYGGAARAFDQIDNAPEEKARG AARAFDQIDNAPEEKARGITINTSHVEYDT R A F E K A 2 0 1 2 0 1 2 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 12 0 2 3 1375.6256 P0CE48;P0CE47 P0CE48 46 57 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 2.8154E-235 251.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 213040000 47856000 60558000 0 0 48138000 56491000 0 0 113 269 117 621;622;623;624 461;462;463;464 462 4 47856000 61987000 0 0 58070000 62580000 0 0 AFETLVRELATRCQE GFFGIDGLRIFMPAEAFETLVRELATRCQE AFETLVRELATRCQEGPLAEALTGLRCLYG E A F Q E G 2 2 0 0 1 1 3 0 0 0 2 0 0 1 0 0 2 0 0 1 0 0 15 2 2 2 1821.9043 P10030 P10030 331 345 pifC Transcriptional repressor PifC yes yes 3 0.0029677 38.799 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 114 270 118 625;626;627;628;629;630;631 465 465 55;56 0 0 0 0 0 0 0 0 0 AFIEENALK QLFTTLMGDAVEPRRAFIEENALKAANIDI AVEPRRAFIEENALKAANIDI_________ R A F L K A 2 0 1 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 9 0 2 2 1033.5444 P0AES6 P0AES6 790 798 gyrB DNA gyrase subunit B yes yes 2 9.4405E-05 104.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61255000 11775000 10555000 0 0 17852000 21073000 0 0 115 239 119 632;633;634;635 466;467;468;469 469 4 11775000 10805000 0 0 21534000 23344000 0 0 AFKLLPEHDVA RGNRVTVDGEIVRNAAFKLLPEHDVAYDGN VRNAAFKLLPEHDVAYDGNPLAQQHGPRYF A A F V A Y 2 0 0 1 0 0 1 0 1 0 2 1 0 1 1 0 0 0 0 1 0 0 11 1 1 2 1238.6659 P0AA43 P0AA43 38 48 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 0.00091313 78.934 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 102550000 10615000 12590000 0 0 28485000 50861000 0 0 116 183 120 636;637;638;639;640;641;642;643 470;471;472 472 3 64081000 75349000 0 0 40553000 72502000 0 0 AFLAQLSEEQVTK PIGGKLPMHASGAGKAFLAQLSEEQVTKLL GKAFLAQLSEEQVTKLLHRKGLHAYTHATL K A F T K L 2 0 0 0 0 2 2 0 0 0 2 1 0 1 0 1 1 0 0 1 0 0 13 0 2 2 1462.7668 P16528 P16528 164 176 iclR Acetate operon repressor yes yes 2 6.2993E-120 207.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 356640000 102480000 83067000 0 0 80208000 90884000 0 0 117 285 121 644;645;646;647 473;474;475;476;477 473 5 102480000 85027000 0 0 96755000 100680000 0 0 AFLDAGHYQPLR SRDPGDSAEMMQARRAFLDAGHYQPLRDAI ARRAFLDAGHYQPLRDAIVAQLRERLDDKA R A F L R D 2 1 0 1 0 1 0 1 1 0 2 0 0 1 1 0 0 0 1 0 0 0 12 0 0 3 1386.7044 P36999 P36999 60 71 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 1.838E-69 212.03 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 950430000 275690000 216530000 0 0 180540000 277670000 0 0 118 352 122 648;649;650;651;652;653;654;655 478;479;480;481;482;483;484;485;486;487 485 10 275690000 221640000 0 0 217790000 307600000 0 0 AFLHMALDK VLLRRKNSWQTAAAKAFLHMALDKCAVVGG QTAAAKAFLHMALDKCAVVGGNESR_____ K A F D K C 2 0 0 1 0 0 0 0 1 0 2 1 1 1 0 0 0 0 0 0 0 0 9 0 0 2 1044.5426 P27111 P27111 281 289 cynR HTH-type transcriptional regulator CynR yes yes 2 0.0010704 89.752 By MS/MS By MS/MS By MS/MS 1 1 1 46405000 15671000 13009000 0 0 17725000 0 0 0 119 319 123 656;657;658 488;489;490 488 2 15671000 13316000 0 0 21381000 0 0 0 AFLPGSLVDVRPVR GKVKGGFTVELNGIRAFLPGSLVDVRPVRD RAFLPGSLVDVRPVRDTLHLEGKELEFKVI R A F V R D 1 2 0 1 0 0 0 1 0 0 2 0 0 1 2 1 0 0 0 3 0 0 14 1 0 3 1524.8776 P0AG67 P0AG67 129 142 rpsA 30S ribosomal protein S1 yes yes 2;3 2.4901E-14 100.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 135340000 31420000 37959000 0 0 30494000 35466000 0 0 120 261 124 659;660;661;662;663;664;665;666 491;492;493;494;495;496 491 6 31420000 38855000 0 0 36785000 39288000 0 0 AFMQKPVSKLPGAKQVTIAQLE LQNADLVVWVGPEMEAFMQKPVSKLPGAKQ SKLPGAKQVTIAQLEDVKPLLMKSIHGDDD E A F L E D 3 0 0 0 0 3 1 1 0 1 2 3 1 1 2 1 1 0 0 2 0 0 22 3 0 5 2383.3297 P39172 P39172 87 108 znuA High-affinity zinc uptake system protein ZnuA yes yes 3;4 8.9254E-24 88.574 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 3 2 3 3 268700000 8924300 10770000 44539000 52070000 29625000 22481000 27385000 72905000 121 361 125;126 667;668;669;670;671;672;673;674;675;676;677;678;679;680;681;682;683;684;685;686;687;688;689 497;498;499;500;501;502;503;504;505;506;507;508 507 291 12 137120000 164250000 378440000 394770000 456100000 340740000 210760000 418390000 AFNEMQPIVDR VYAAIEAGDKAAAQKAFNEMQPIVDRQAAK AAQKAFNEMQPIVDRQAAKGLIHKNKAARH K A F D R Q 1 1 1 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 11 0 1 2 1318.634 P0A7U7 P0A7U7 50 60 rpsT 30S ribosomal protein S20 yes yes 2 3.7953E-79 185.6 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 243550000 64759000 61269000 0 0 51699000 65828000 0 0 122 127 127;128 690;691;692;693;694;695;696;697;698;699 509;510;511;512;513;514;515;516 513 122 8 64759000 62715000 0 0 62364000 72922000 0 0 AFQSRLP ENESEPEEPSGVEGAAFQSRLPHDRMTSQE EPSGVEGAAFQSRLPHDRMTSQEAACFPDI A A F L P H 1 1 0 0 0 1 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 7 1 0 1 817.44464 LSD1-FL-His LSD1-FL-His 180 186 yes yes 2 0.0048326 66.994 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 710710000 82939000 93736000 12022000 10573000 294180000 217270000 0 0 123 24 129 700;701;702;703;704;705 517 517 1 500660000 561010000 102150000 80162000 418810000 309710000 0 0 AFRKQQNEE PHVTHFDKTDITELEAFRKQQNEEAAKRKL DITELEAFRKQQNEEAAKRKLDVKITPVVF E A F E E A 1 1 1 0 0 2 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 9 2 1 1 1148.5574 P06959 P06959 439 447 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 3 0.020753 33.263 By MS/MS By MS/MS 2 1 36488000 0 0 25024000 11464000 0 0 0 0 124 53 130 706;707;708 518 518 1 0 0 212630000 86915000 0 0 0 0 AFSGIVAGNVK YPDQPVEVLAADLRRAFSGIVAGNVKEVGI DLRRAFSGIVAGNVKEVGIRAIEEFGPYKI R A F V K E 2 0 1 0 0 0 0 2 0 1 0 1 0 1 0 1 0 0 0 2 0 0 11 0 0 2 1061.5869 P0ADR8 P0ADR8 391 401 ygdH LOG family protein YgdH yes yes 2 0.00099364 49.418 By MS/MS By MS/MS By MS/MS 1 1 1 10278000 0 0 0 0 5156700 5121200 0 0 125 225 131 709;710;711 519;520;521 519 3 0 0 0 0 6220600 5673100 0 0 AFTDFFAR KPEIAELAETYPEVKAFTDFFARSTRGLIR ETYPEVKAFTDFFARSTRGLIR________ K A F A R S 2 1 0 1 0 0 0 0 0 0 0 0 0 3 0 0 1 0 0 0 0 0 8 0 0 2 973.46577 P0A722 P0A722 248 255 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2 1.332E-45 166.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 73148000 15462000 20341000 0 0 18100000 19245000 0 0 126 92 132 712;713;714;715 522;523;524;525 525 4 15462000 20821000 0 0 21834000 21319000 0 0 AFTTQLTVLLMLVAK LMTNAGTEIGVASTKAFTTQLTVLLMLVAK AFTTQLTVLLMLVAKLSRLKGLDASIEHDI K A F A K L 2 0 0 0 0 1 0 0 0 0 4 1 1 1 0 0 3 0 0 2 0 0 15 0 0 2 1647.9634 P17169 P17169 405 419 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.022835 33.225 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 16889000 2633700 3282200 0 0 1930100 9042500 0 0 127 288 133 716;717;718;719;720;721;722 526 526 1 14231000 8838000 0 0 2328300 35706000 0 0 AFVDLRDVRQPE EAIRRAATILAEQLEAFVDLRDVRQPEVKE QLEAFVDLRDVRQPEVKEEKPEFDPILLRP E A F P E V 1 2 0 2 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 12 2 0 2 1443.747 P0A7Z4 P0A7Z4 230 241 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3 1.008E-05 69.451 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 87017000 9801000 9774400 0 11484000 8215000 0 19271000 28471000 128 135 134 723;724;725;726;727;728 527;528;529;530;531;532 529 5 150590000 149060000 0 87068000 126480000 0 148310000 163390000 AFVEYLNK RDGKEDHFHYEGGIKAFVEYLNKNKTPIHP HYEGGIKAFVEYLNKNKTPIHPNIFYFSTE K A F N K N 1 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 8 0 1 1 982.51238 P0AES6 P0AES6 224 231 gyrB DNA gyrase subunit B yes yes 2 0.00030698 105.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 88895000 21382000 28890000 0 0 17256000 21366000 0 0 129 239 135 729;730;731;732 533;534;535;536 534 4 21382000 29572000 0 0 20816000 23669000 0 0 AFWLAASGR FLVKQTEDIPQVLKKAFWLAASGRPGPVVV PQVLKKAFWLAASGRPGPVVVDLPKDILNP K A F G R P 3 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 9 0 0 3 977.5083 P00893 P00893 145 153 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 0.0024711 51.059 By MS/MS 1 0 0 0 0 0 0 0 0 0 130 29 136 733 537 537 1 0 0 0 0 0 0 0 0 AFWLAASGRPGPVVVDLPK FLVKQTEDIPQVLKKAFWLAASGRPGPVVV AASGRPGPVVVDLPKDILNPANKLPYVWPE K A F P K D 3 1 0 1 0 0 0 2 0 0 2 1 0 1 3 1 0 1 0 3 0 0 19 1 0 6 1979.0993 P00893 P00893 145 163 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 3 0.00025856 46.131 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33736000 9649600 7673800 0 0 7361600 9051100 0 0 131 29 137 734;735;736;737 538;539;540;541 539 4 9649600 7854900 0 0 8880400 10027000 0 0 AFYGSVAR EISAIFTHTDNPGEKAFYGSVARLAAERGI TDNPGEKAFYGSVARLAAERGIPVYAPDNV K A F A R L 2 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 1 1 0 0 8 0 0 2 869.43955 P77398 P77398 40 47 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 6.5386E-12 132.09 By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 7674400000 2103500000 2008300000 0 0 1807700000 1754800000 0 0 132 432 138 738;739;740;741;742;743 542;543;544 542 3 2103500000 2055700000 0 0 2180700000 1943900000 0 0 AGAAAPAAKQE VSTGSLIMVFEVAGEAGAAAPAAKQEAAPA VAGEAGAAAPAAKQEAAPAAAPAPAAGVKE E A G Q E A 6 0 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 11 1 0 7 983.50361 P06959 P06959 183 193 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.00036043 72.23 By MS/MS By MS/MS 1 1 11536000 0 0 0 0 0 0 4406600 7129600 133 53 139 744;745 545 545 1 0 0 0 0 0 0 33914000 40916000 AGAAQTIVASQQR MDVDKPGKDSYELRKAGAAQTIVASQQRWA RKAGAAQTIVASQQRWALMTETPDEEELDL K A G Q R W 4 1 0 0 0 3 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 13 0 0 4 1299.6895 P32125 P32125 63 75 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 2;3 3.755E-46 157.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 124420000 34112000 31052000 0 0 28452000 30807000 0 0 134 337 140 746;747;748;749;750;751;752;753 546;547;548;549;550;551 550 6 34112000 31785000 0 0 34322000 34127000 0 0 AGALIAPIQIVEER INNPNEARQLSLLLRAGALIAPIQIVEERT RAGALIAPIQIVEERTIGPTLGMQNIEQGL R A G E R T 3 1 0 0 0 1 2 1 0 3 1 0 0 0 1 0 0 0 0 1 0 0 14 0 2 4 1478.8457 P0AG90 P0AG90 426 439 secD Protein translocase subunit SecD yes yes 2 0.0025312 60.563 By matching By matching By MS/MS By MS/MS 1 1 1 1 8357000 1514200 1741300 0 0 2653100 2448400 0 0 135 263 141 754;755;756;757 552;553 553 0 1514200 1782400 0 0 3200400 2712300 0 0 AGDIAAAIGLK VQMHANKREEIKEVRAGDIAAAIGLKDVTT KEVRAGDIAAAIGLKDVTTGDTLCDPDAPI R A G L K D 4 0 0 1 0 0 0 2 0 2 1 1 0 0 0 0 0 0 0 0 0 0 11 0 0 4 998.57605 P0A6M8 P0A6M8 379 389 fusA Elongation factor G yes yes 2 0.0016647 54.982 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 23061000 1062600 5078100 0 0 8485100 8435300 0 0 136 76 142 758;759;760;761;762 554;555;556;557 554 4 1062600 5198000 0 0 10236000 9344400 0 0 AGDKAAAQKAFNE SMMRTFIKKVYAAIEAGDKAAAQKAFNEMQ IEAGDKAAAQKAFNEMQPIVDRQAAKGLIH E A G N E M 5 0 1 1 0 1 1 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 13 2 0 5 1319.647 P0A7U7 P0A7U7 41 53 rpsT 30S ribosomal protein S20 yes yes 2;3 0.00089726 47.559 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 3 3 2 2 72469000 3642500 6316600 6481900 6507000 8387800 6226600 15275000 19631000 137 127 143 763;764;765;766;767;768;769;770;771;772;773;774;775;776;777;778;779 558;559;560;561 561 3 55966000 71165000 55076000 49333000 92494000 86869000 117560000 112660000 AGDKLPADDKTAIE QGDHLLHSTRKQVEEAGDKLPADDKTAIES EAGDKLPADDKTAIESALTALETALKGEDK E A G I E S 3 0 0 3 0 0 1 1 0 1 1 2 0 0 1 0 1 0 0 0 0 0 14 2 0 4 1442.7253 P0A6Y8 P0A6Y8 553 566 dnaK Chaperone protein DnaK yes yes 2;3 2.6435E-47 153.49 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 2 2 6104600000 757210000 687600000 1484600000 190920000 335970000 331630000 265240000 2051400000 138 86 144 780;781;782;783;784;785;786;787;788;789;790;791;792;793;794 562;563;564;565;566;567;568;569;570;571;572;573;574;575 564 14 11634000000 10486000000 12615000000 1447400000 5172500000 5026300000 2041400000 11773000000 AGDNAPMAYIELVDR SRAGGYTRILKCGFRAGDNAPMAYIELVDR AGDNAPMAYIELVDRSEKAEAAAE______ R A G D R S 3 1 1 2 0 0 1 1 0 1 1 0 1 0 1 0 0 0 1 1 0 0 15 0 1 4 1633.777 P0AG44 P0AG44 104 118 rplQ 50S ribosomal protein L17 yes yes 2 5.6711E-18 119.25 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 179410000 45961000 54072000 0 0 40645000 38732000 0 0 139 257 145;146 795;796;797;798;799;800;801;802 576;577;578;579;580;581;582;583;584 584 227 8 45961000 55348000 0 0 49030000 42906000 0 0 AGDPPSIPLSR DGKIHIGLDNYSGGRAGDPPSIPLSRRLRE SGGRAGDPPSIPLSRRLRELPLRVGRLKTG R A G S R R 1 1 0 1 0 0 0 1 0 1 1 0 0 0 3 2 0 0 0 0 0 0 11 0 0 4 1108.5877 P0A6U3 P0A6U3 175 185 mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG yes yes 2 0.011247 45.368 By MS/MS By matching By matching By matching 1 1 1 1 11939000 2649600 3548100 0 0 2433300 3307700 0 0 140 82 147 803;804;805;806 585 585 1 2649600 3631900 0 0 2935300 3664100 0 0 AGDQIQSGVDAAIKPGNTLPMR KDGERRYILAPKGLKAGDQIQSGVDAAIKP GVDAAIKPGNTLPMRNIPVGSTVHNVEMKP K A G M R N 3 1 1 2 0 2 0 3 0 2 1 1 1 0 2 1 1 0 0 1 0 0 22 1 0 5 2238.1427 P60422 P60422 112 133 rplB 50S ribosomal protein L2 yes yes 2;3 1.8961E-273 303.49 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 7 6 4297900000 1160900000 1151500000 0 0 891090000 1094500000 0 0 141 379 148;149;150;151 807;808;809;810;811;812;813;814;815;816;817;818;819;820;821;822;823;824;825;826;827 586;587;588;589;590;591;592;593;594;595;596;597;598;599;600;601;602;603 592 299 65 14 1160900000 1178600000 0 0 1074900000 1212500000 0 0 AGDRPINLR KGQDIERYYPAEDAKAGDRPINLRCELLIP PAEDAKAGDRPINLRCELLIPIRR______ K A G L R C 1 2 1 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 9 1 0 2 1010.5621 P0ACI0 P0ACI0 272 280 rob Right origin-binding protein yes yes 2 6.2127E-05 107.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 69457000 14428000 17481000 0 1968300 13960000 18402000 0 3218900 142 211 152 828;829;830;831;832;833 604;605;606;607 606 4 14428000 17894000 0 14923000 16840000 20385000 0 18473000 AGELIGMVAQQVGGK SLIAGVSKDVTDRVKAGELIGMVAQQVGGK AGELIGMVAQQVGGKGGGRPDMAQAGGTDA K A G G K G 2 0 0 0 0 2 1 4 0 1 1 1 1 0 0 0 0 0 0 2 0 0 15 0 1 2 1456.7708 P00957 P00957 828 842 alaS Alanine--tRNA ligase yes yes 2 4.2968E-15 116.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21011000 5924700 4240300 0 0 5761800 5084500 0 0 143 33 153 834;835;836;837 608;609;610;611 609 4 5924700 4340400 0 0 6950500 5632500 0 0 AGELKHGP LKLKEISYIHAEAYAAGELKHGPLALIDAD IHAEAYAAGELKHGPLALIDADMPVIVVAP A A G G P L 1 0 0 0 0 0 1 2 1 0 1 1 0 0 1 0 0 0 0 0 0 0 8 1 1 1 807.4239 P17169 P17169 500 507 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.0010245 85.265 By MS/MS 1 1483700 0 0 0 0 0 1483700 0 0 144 288 154 838 612 612 1 0 0 0 0 0 2115000 0 0 AGENVGVLLR CTGVEMFRKLLDEGRAGENVGVLLRGIKRE LDEGRAGENVGVLLRGIKREEIERGQVLAK R A G L R G 1 1 1 0 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 2 0 0 10 0 1 1 1026.5822 P0CE48;P0CE47 P0CE48 271 280 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 3.4398E-76 184.49 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 196210000 54881000 46134000 0 0 45255000 49941000 0 0 145 269 155 839;840;841;842 613;614;615;616 615 4 54881000 47223000 0 0 54591000 55323000 0 0 AGEPHAEVHALR IVKDGEIVGEGYHQRAGEPHAEVHALRMAG HQRAGEPHAEVHALRMAGEKAKGATAYVTL R A G L R M 3 1 0 0 0 0 2 1 2 0 1 0 0 0 1 0 0 0 0 1 0 0 12 0 2 4 1285.6527 P25539 P25539 46 57 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 3 0.00078915 54.343 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 59625000 17602000 17814000 0 0 11453000 12756000 0 0 146 315 156 843;844;845;846;847 617;618;619;620 618 4 17602000 18234000 0 0 32123000 14131000 0 0 AGFAQVFVLK GSGMQCQEPANALTKAGFAQVFVLKEGVAG NALTKAGFAQVFVLKEGVAGWAGENLPLVR K A G L K E 2 0 0 0 0 1 0 1 0 0 1 1 0 2 0 0 0 0 0 2 0 0 10 0 0 2 1078.6175 P0AG27 P0AG27 117 126 yibN Uncharacterized protein YibN yes yes 2 0.00032457 89.142 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12604000 2961200 2296300 0 0 3374000 3972400 0 0 147 255 157 848;849;850;851 621;622;623;624 624 4 2961200 2350500 0 0 4070100 4400500 0 0 AGFKGVEIREE AWEVAQSVPTKAVVEAGFKGVEIREELTRR AVVEAGFKGVEIREELTRRRIAAVASWKEQ E A G E E L 1 1 0 0 0 0 3 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 11 2 2 1 1233.6354 P06961 P06961 381 391 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 3 0.011087 35.71 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 54706000 3964900 3952200 11367000 9429400 4070100 3029700 7531900 11361000 148 54 158 852;853;854;855;856;857;858;859 625 625 0 60919000 60272000 96583000 71489000 62662000 45920000 57967000 65198000 AGFRITNITDVTP GPGPGRESTIRALNAAGFRITNITDVTPIP NAAGFRITNITDVTPIPHNGCRPPKKRRV_ A A G T P I 1 1 1 1 0 0 0 1 0 2 0 0 0 1 1 0 3 0 0 1 0 0 13 1 0 1 1403.7409 P0A7R9 P0A7R9 103 115 rpsK 30S ribosomal protein S11 yes yes 2 1.558E-09 81.865 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32806000 1078100 1341200 0 0 9592300 20794000 0 0 149 121 159 860;861;862;863 626;627;628 628 3 6507800 8027400 0 0 13656000 29642000 0 0 AGGNYLSSLLVGSEAR SWNRAAPNTIPTAAKAGGNYLSSLLVGSEA GGNYLSSLLVGSEARRHGYQEGIALDVNGY K A G A R R 2 1 1 0 0 0 1 3 0 0 3 0 0 0 0 3 0 0 1 1 0 0 16 0 1 2 1592.8158 P0AB80 P0AB80 161 176 ilvE Branched-chain-amino-acid aminotransferase yes yes 2 1.3178E-15 119.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27984000 7803600 8478600 0 0 4852800 6849600 0 0 150 191 160 864;865;866;867 629;630;631;632 630 4 7803600 8678700 0 0 5853900 7587800 0 0 AGGTLYGLQVLE VAQAKSPHVAALGSEAGGTLYGLQVLERIE GSEAGGTLYGLQVLERIEANQRQNFTRFVV E A G L E R 1 0 0 0 0 1 1 3 0 0 3 0 0 0 0 0 1 0 1 1 0 0 12 0 0 1 1219.6449 P0A9J8 P0A9J8 256 267 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 2.4086E-41 149.94 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 35217000 4865200 4871600 5767800 7310300 4618900 5045600 0 2737000 151 166 161 868;869;870;871;872;873;874 633 633 1 74753000 74292000 49008000 55423000 71113000 76474000 0 15707000 AGHAIIGRLVPE MVMTEAQKESTAYHEAGHAIIGRLVPEHDP YHEAGHAIIGRLVPEHDPVHKVTIIPRGRA E A G P E H 2 1 0 0 0 0 1 2 1 2 1 0 0 0 1 0 0 0 0 1 0 0 12 1 0 3 1231.7037 P0AAI3 P0AAI3 416 427 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 3 0.0056556 40.727 By matching By matching By matching By matching By MS/MS By matching 2 1 1 1 1 1 18611000 3890300 1369700 3055300 2832300 0 0 4022300 3440600 152 185 162 875;876;877;878;879;880;881 634 634 1 19972000 20888000 25960000 21473000 0 0 30957000 19745000 AGHFAKAGVE VTTGAKKANRVTKPEAGHFAKAGVEAGRGL VTKPEAGHFAKAGVEAGRGLWEFRLAEGEE E A G V E A 3 0 0 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 1 0 0 10 1 0 3 985.49813 P60438 P60438 65 74 rplC 50S ribosomal protein L3 yes yes 2 0.0083373 74.92 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 63337000 0 5535100 7813800 10583000 0 0 18363000 21041000 153 380 163 882;883;884;885;886 635;636;637;638 637 1 0 84411000 66393000 80237000 0 0 141330000 120750000 AGIALNDNFVK TDFNGEVCTSVFDAKAGIALNDNFVKLVSW FDAKAGIALNDNFVKLVSWYDNETGYSNKV K A G V K L 2 0 2 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 0 0 2 1160.619 P0A9B2 P0A9B2 297 307 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 0.0019116 47.603 By MS/MS 1 0 0 0 0 0 0 0 0 0 154 163 164 887 639 639 1 0 0 0 0 0 0 0 0 AGILTRRYGLDKE RMYEKTGDRQLSAWEAGILTRRYGLDKEMV WEAGILTRRYGLDKEMVMDFFRENNSCSTL E A G K E M 1 2 0 1 0 0 1 2 0 1 2 1 0 0 0 0 1 0 1 0 0 0 13 3 0 1 1490.8205 P64574 P64574 57 69 yghW Uncharacterized protein YghW yes yes 3 0.016829 30.438 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 60477000 5862400 6051200 9561800 9520900 3548900 4557100 0 21375000 155 396 165 888;889;890;891;892;893;894 640 640 1 90074000 92282000 81245000 72183000 54639000 69069000 0 122670000 AGKPRWDWQPEPVNE QQQVVIQNINELVKEAGKPRWDWQPEPVNE AGKPRWDWQPEPVNEALNARVAALAEARLS E A G N E A 1 1 1 1 0 1 2 1 0 0 0 1 0 0 3 0 0 2 0 1 0 0 15 2 1 4 1807.8642 P05055 P05055 226 240 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 0.0074669 29.013 By MS/MS By MS/MS 1 1 12191000 0 2066500 0 10124000 0 0 0 0 156 48 166 895;896 641;642 642 2 0 31514000 0 76756000 0 0 0 0 AGLGHEHKPVGSFLFAGPTGVGK DKAIEALTEAIKMARAGLGHEHKPVGSFLF PVGSFLFAGPTGVGKTEVTVQLSKALGIEL R A G G K T 2 0 0 0 0 0 1 6 2 0 2 2 0 2 2 1 1 0 0 2 0 0 23 1 1 4 2262.1909 P0ABH9 P0ABH9 479 501 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 4 0.02077 18.719 By MS/MS By matching By matching 1 1 1 18887000 0 4446100 0 0 7406400 7034100 0 0 157 201 167 897;898;899 643 643 0 0 4551000 0 0 8934400 7792200 0 0 AGLIGADEVPILTTSSAE NYLRLEWGPDFQQHEAGLIGADEVPILTTS IGADEVPILTTSSAELAQQQIAMLNGCTWL E A G A E L 3 0 0 1 0 0 2 2 0 2 2 0 0 0 1 2 2 0 0 1 0 0 18 0 1 4 1742.8938 P0A8R9 P0A8R9 196 213 hdfR HTH-type transcriptional regulator HdfR yes yes 2 6.7212E-09 73.9 By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 19939000 2683100 2493000 1978200 0 4049000 0 8735400 0 158 152 168 900;901;902;903;904 644 644 1 41225000 38018000 16809000 0 62339000 0 67230000 0 AGLKVTLPR ______________________________ NTALKKAGLKVTLPRLKILEVLQEPDNHHV K A G P R L 1 1 0 0 0 0 0 1 0 0 2 1 0 0 1 0 1 0 0 1 0 0 9 1 0 2 953.6022 P0A9A9 P0A9A9 11 19 fur Ferric uptake regulation protein yes yes 2 0.0090928 62.582 By MS/MS By MS/MS By matching 1 1 1 18656000 9813800 6836800 0 0 0 2005100 0 0 159 162 169 905;906;907 645 645 1 9813800 6998100 0 0 0 2221200 0 0 AGLVDFAELLLR TWQKVYQAYQEACDRAGLVDFAELLLRAHE CDRAGLVDFAELLLRAHELWLNKPHILQHY R A G L R A 2 1 0 1 0 0 1 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 12 0 1 2 1315.75 P03018 P03018 184 195 uvrD DNA helicase II yes yes 2 0.0034268 43.512 By MS/MS 1 0 0 0 0 0 0 0 0 0 160 41 170 908 646 646 1 0 0 0 0 0 0 0 0 AGLVELVEINHVHR DQSERRFVVECDGEKAGLVELVEINHVHRR KAGLVELVEINHVHRRAEFQIIISPEYQGK K A G H R R 1 1 1 0 0 0 2 1 2 1 2 0 0 0 0 0 0 0 0 3 0 0 14 0 2 1 1584.8736 P0A951 P0A951 69 82 speG Spermidine N(1)-acetyltransferase yes yes 2;3;4 6.9944E-24 132.5 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 2 696760000 159060000 175180000 0 0 164490000 198030000 0 0 161 160 171 909;910;911;912;913;914;915;916 647;648;649;650;651;652;653;654;655;656 654 10 159060000 179310000 0 0 198430000 219370000 0 0 AGLVVLTAFISPHRAE ENIRRVGEVANLMVEAGLVVLTAFISPHRA GLVVLTAFISPHRAERQMVRERVGEGRFIE E A G A E R 3 1 0 0 0 0 1 1 1 1 2 0 0 1 1 1 1 0 0 2 0 0 16 1 0 4 1679.9359 P0A6J1 P0A6J1 99 114 cysC Adenylyl-sulfate kinase yes yes 3 0.0022843 44.807 By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 15272000 1286900 1123900 0 0 5338100 6625400 0 897790 162 73 172 917;918;919;920;921 657 657 1 19773000 17140000 0 0 82185000 100420000 0 5152300 AGLYYADHITAVSPTYAR NIHGLEFNGQISFLKAGLYYADHITAVSPT YYADHITAVSPTYAREITEPQFAYGMEGLL K A G A R E 4 1 0 1 0 0 0 1 1 1 1 0 0 0 1 1 2 0 3 1 0 0 18 0 0 5 1967.9741 P0A6U8 P0A6U8 200 217 glgA Glycogen synthase yes yes 3 1.7534E-12 61.167 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 163 83 173 922;923;924 658;659;660 660 3 0 0 0 0 0 0 0 0 AGMELFDLR VELLCDYAPARRFGKAGMELFDLRLHERDD ARRFGKAGMELFDLRLHERDDVLQAVFDKG K A G L R L 1 1 0 1 0 0 1 1 0 0 2 0 1 1 0 0 0 0 0 0 0 0 9 0 1 1 1050.5168 P75990 P75990 90 98 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 0.00033517 103.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37737000 10336000 12787000 0 0 7077800 7537000 0 0 164 414 174 925;926;927;928 661;662;663;664;665 663 5 10336000 13089000 0 0 8538000 8349300 0 0 AGPGTAGGSENGSE AAAAAAAAAAATGTEAGPGTAGGSENGSEV EAGPGTAGGSENGSEVAAQPAGLSGPAEVG E A G S E V 2 0 1 0 0 0 2 5 0 0 0 0 0 0 1 2 1 0 0 0 0 0 14 0 1 3 1189.4847 LSD1-FL-His LSD1-FL-His 25 38 yes yes 2 1.3419E-15 122.13 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3296600000 0 0 612660000 619700000 0 0 937540000 1126700000 165 24 175 929;930;931;932 666 666 1 0 0 5205700000 4698300000 0 0 7215500000 6466100000 AGPGTAGGSENGSEVAAQPAGLSGPAE AAAAAAAAAAATGTEAGPGTAGGSENGSEV SEVAAQPAGLSGPAEVGPGAVGERTPRKKE E A G A E V 6 0 1 0 0 1 3 7 0 0 1 0 0 0 3 3 1 0 0 1 0 0 27 0 2 9 2338.0673 LSD1-FL-His LSD1-FL-His 25 51 yes yes 2;3 2.8672E-182 212.35 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 1 133640000 0 3767900 29001000 36198000 7647300 6922200 29862000 20239000 166 24 176 933;934;935;936;937;938;939;940;941;942 667;668;669;670;671;672;673;674 671 8 0 57461000 246420000 274430000 117740000 104920000 229820000 116150000 AGPLAGYPVVDMGIR EYIPAVDKGIQEQLKAGPLAGYPVVDMGIR AGPLAGYPVVDMGIRLHFGSYHDVDSSELA K A G I R L 2 1 0 1 0 0 0 3 0 1 1 0 1 0 2 0 0 0 1 2 0 0 15 0 0 4 1514.7915 P0A6M8 P0A6M8 563 577 fusA Elongation factor G yes yes 2 0.00027462 64.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23091000 4409700 5632300 0 0 5558300 7490300 0 0 167 76 177 943;944;945;946 675;676;677;678 676 4 4409700 5765200 0 0 6705000 8297600 0 0 AGQLNPDTR LARRKLLPSLYQLEKAGQLNPDTRIIGVGR LYQLEKAGQLNPDTRIIGVGRADWDKAAYT K A G T R I 1 1 1 1 0 1 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 9 0 0 2 970.48321 P0AC53 P0AC53 36 44 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.012398 49.418 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14299000 5537700 4044100 0 0 2393000 2324200 0 0 168 205 178 947;948;949;950 679;680;681 681 3 5537700 4139500 0 0 2886700 2574700 0 0 AGQTSMIAR DQPNKKYYDPRVWLRAGQTSMIARLEKAFQ PRVWLRAGQTSMIARLEKAFQELNAIDVL_ R A G A R L 2 1 0 0 0 1 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 9 0 0 2 933.4702 P0AB71 P0AB71 337 345 fbaA Fructose-bisphosphate aldolase class 2 yes yes 2 2.233E-13 127.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35652000 8618100 10404000 0 0 8064000 8565600 0 0 169 190 179 951;952;953;954 682;683;684;685 684 3 8618100 10650000 0 0 9727600 9488800 0 0 AGQVSFK GTPMTTYKALVEMHKAGQVSFKHVVTFNMD KALVEMHKAGQVSFKHVVTFNMDEYVGLPK K A G F K H 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 7 0 0 1 735.39154 P0A759 P0A759 58 64 nagB Glucosamine-6-phosphate deaminase yes yes 2 0.0024252 80.462 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29041000 6000700 6010600 0 0 8952700 8077200 0 0 170 96 180 955;956;957;958 686;687;688;689 688 4 6000700 6152400 0 0 10800000 8947700 0 0 AGQYAYR ARSRVYRVAFQAVIKAGQYAYRDRRQRKRQ VAFQAVIKAGQYAYRDRRQRKRQFRQLWIA K A G Y R D 2 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 7 0 0 2 827.3926 P0A7L3 P0A7L3 42 48 rplT 50S ribosomal protein L20 yes yes 2 5.1598E-18 117.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 84773000 26229000 24675000 0 0 15529000 18340000 0 0 171 111 181 959;960;961;962 690;691;692;693;694 690 3 26229000 25257000 0 0 18733000 20317000 0 0 AGRIADQFLGAMYTLPRQATPGVPAQQSPSMYLE YPATVHGALLSGLREAGRIADQFLGAMYTL TPGVPAQQSPSMYLEHHHHHH_________ E A G L E H 5 2 0 1 0 4 1 3 0 1 3 0 2 1 4 2 2 0 2 1 0 0 34 2 0 9 3663.8178 LSD1-FL-His LSD1-FL-His 824 857 yes yes 4 4.2023E-67 123.75 By MS/MS By MS/MS 2 5 644950000 0 0 0 0 204130000 440820000 0 0 172 24 182;183;184 963;964;965;966;967;968;969 695;696;697;698;699;700 698 38;39 6 0 0 0 0 3142800000 6681300000 0 0 AGSSGNDYDLMAQP WRADPWARGSYSYVAAGSSGNDYDLMAQPI AAGSSGNDYDLMAQPITPGPSIPGAPQPIP A A G Q P I 2 0 1 2 0 1 0 2 0 0 1 0 1 0 1 2 0 0 1 0 0 0 14 0 0 2 1424.5878 LSD1-FL-His LSD1-FL-His 768 781 yes yes 2 3.0488E-33 137.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 335840000 54597000 46530000 0 0 79209000 155500000 0 0 173 24 185;186 970;971;972;973;974;975;976;977 701;702;703;704 702 40 4 329580000 278480000 0 0 112770000 221670000 0 0 AGTHAPGMSQRRMLE PSQTEEGDLHYGHGEAGTHAPGMSQRRMLE AGTHAPGMSQRRMLEVEIDVLDKNNRLAER E A G L E V 2 2 0 0 0 1 1 2 1 0 1 0 2 0 1 1 1 0 0 0 0 0 15 2 0 3 1640.7875 P0AAN3 P0AAN3 65 79 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3;4 0.00020838 50.843 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 2 2 1 1 152950000 11235000 11109000 44243000 51550000 9267500 10072000 10181000 5291400 174 187 187 978;979;980;981;982;983;984;985;986;987;988;989;990 705;706;707;708;709;710;711;712 705 7 172620000 169410000 375930000 390830000 142680000 152650000 78355000 30366000 AGVDTGDRIRLA HGRVERSKTLSVKIPAGVDTGDRIRLAGEG KIPAGVDTGDRIRLAGEGEAGEHGAPAGDL P A G L A G 2 2 0 2 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 12 2 0 1 1242.668 P08622 P08622 218 229 dnaJ Chaperone protein DnaJ yes yes 3 2.3866E-05 66.262 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 58326000 10422000 11413000 0 0 2421300 34070000 0 0 175 61 188 991;992;993;994 713;714;715;716 716 4 62915000 68304000 0 0 3447200 48567000 0 0 AGVEVDDR AIGRVPNGKNLDAGKAGVEVDDRGFIRVDK KNLDAGKAGVEVDDRGFIRVDKQLRTNVPH K A G D R G 1 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 8 0 1 1 859.40356 P0A9P0 P0A9P0 285 292 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.0016605 73.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39157000 13152000 16235000 0 0 9770300 0 0 0 176 172 189 995;996;997;998 717;718;719;720 720 4 13152000 16618000 0 0 11786000 0 0 0 AGVHFGHQTR ______________________________ RDMLKAGVHFGHQTRYWNPKMKPFIFGARN K A G T R Y 1 1 0 0 0 1 0 2 2 0 0 0 0 1 0 0 1 0 0 1 0 0 10 0 0 1 1108.5526 P0A7V0 P0A7V0 12 21 rpsB 30S ribosomal protein S2 yes yes 2;3 1.6791E-28 150.36 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 518990000 174470000 203970000 0 0 64527000 76025000 0 0 177 128 190 999;1000;1001;1002;1003;1004;1005;1006 721;722;723;724;725;726;727;728;729;730;731 727 11 174470000 208780000 0 0 77839000 84219000 0 0 AGVKSDVTPALSE LLSKGDKQGARSAWEAGVKSDVTPALSEMM WEAGVKSDVTPALSEMMQMKINNLSI____ E A G S E M 2 0 0 1 0 0 1 1 0 0 1 1 0 0 1 2 1 0 0 2 0 0 13 1 0 3 1272.6561 P76576 P76576 183 195 yfgM UPF0070 protein YfgM yes yes 2 0.00011219 64.297 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 178 427 191 1007;1008 732;733 733 2 0 0 0 0 0 0 0 0 AGVLAEVR PFDVALRRFKRSCEKAGVLAEVRRREFYEK FKRSCEKAGVLAEVRRREFYEKPTTERKRA K A G V R R 2 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 1 2 813.47085 P68679 P68679 26 33 rpsU 30S ribosomal protein S21 yes yes 2 3.1774E-25 148.33 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 171560000 0 77623000 2600100 1719100 86830000 620600 0 2163000 179 402 192 1009;1010;1011;1012;1013;1014 734;735 734 2 0 79455000 22092000 13033000 104740000 884660 0 12413000 AGVMVLIAGGNVVR DYAGQAKQISQEAAKAGVMVLIAGGNVVRF KAGVMVLIAGGNVVRFAPALNVSEEEVTTG K A G V R F 2 1 1 0 0 0 0 3 0 1 1 0 1 0 0 0 0 0 0 4 0 0 14 0 0 2 1354.7755 P77581 P77581 361 374 astC Succinylornithine transaminase yes yes 2 2.4771E-17 118.26 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 63075000 14729000 11664000 0 0 15519000 20320000 841810 0 180 437 193;194 1015;1016;1017;1018;1019;1020;1021;1022;1023 736;737;738;739;740 737 338 5 14729000 11939000 0 0 18721000 22511000 6478800 0 AGVSTGIISHYFR EVGMHDATIAQIARRAGVSTGIISHYFRDK RRAGVSTGIISHYFRDKNGLLEATMRDITS R A G F R D 1 1 0 0 0 0 0 2 1 2 0 0 0 1 0 2 1 0 1 1 0 0 13 0 0 1 1406.7306 P17446 P17446 39 51 betI HTH-type transcriptional regulator BetI yes yes 3 0.00022836 64.55 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 23110000 6590600 5704900 0 0 4282000 6532900 0 0 181 289 195 1024;1025;1026;1027 741;742 742 2 6590600 5839600 0 0 5165400 7236900 0 0 AGWLLAR LAGAGSGKTSVLVARAGWLLARGEASPEQI KTSVLVARAGWLLARGEASPEQILLLAFGR R A G A R G 2 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 7 0 0 2 785.45481 P15038 P15038 230 236 helD Helicase IV yes yes 2 5.4428E-07 120.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 38169000 8184100 11816000 0 0 7880700 10288000 0 0 182 281 196 1028;1029;1030;1031;1032 743;744;745;746;747 744 5 8184100 12095000 0 0 9506500 11396000 0 0 AHALFTR PANIMLMHHVTAALRAHALFTRDVDYIVKD HHVTAALRAHALFTRDVDYIVKDGEVIIVD R A H T R D 2 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 7 0 0 2 814.44497 P10408 P10408 316 322 secA Protein translocase subunit SecA yes yes 2 0.0034061 60.788 By MS/MS 1 0 0 0 0 0 0 0 0 0 183 272 197 1033 748 748 1 0 0 0 0 0 0 0 0 AHEFLHEMNR DLDGDGRRFYTDGPRAHEFLHEMNRDVFTP TDGPRAHEFLHEMNRDVFTPRGLMTVGEMS R A H N R D 1 1 1 0 0 0 2 0 2 0 1 0 1 1 0 0 0 0 0 0 0 0 10 0 2 1 1282.5877 P28904 P28904 229 238 treC Trehalose-6-phosphate hydrolase yes yes 3 0.00021374 73.841 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 42316000 11397000 11554000 0 0 9225400 10140000 0 0 184 328 198 1034;1035;1036;1037;1038 749;750;751;752 752 4 43223000 11826000 0 0 11129000 11233000 0 0 AHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGK GPLNLPNLTRLGLAKAHEGSTGFIPAGMDG VIGAYAWAHEMSSGKDTPSGHWEIAGVPVL K A H G K D 6 0 1 1 0 0 3 6 2 2 0 1 2 1 1 3 1 1 1 1 0 0 33 0 3 7 3347.4976 P0A6K6 P0A6K6 64 96 deoB Phosphopentomutase yes yes 4 6.7663E-10 48.449 By MS/MS By MS/MS 1 1 23907000 0 0 0 0 13852000 10056000 0 0 185 75 199 1039;1040 753;754 753 2 0 0 0 0 16709000 11139000 0 0 AHGGENIHIISK IRKRSDVIEIREHLKAHGGENIHIISKIEN HLKAHGGENIHIISKIENQEGLNNFDEILE K A H S K I 1 0 1 0 0 0 1 2 2 3 0 1 0 0 0 1 0 0 0 0 0 0 12 0 1 1 1274.6731 P0AD61 P0AD61 209 220 pykF Pyruvate kinase I yes yes 3 0.0011808 53.448 By MS/MS By MS/MS By MS/MS 1 1 1 7814100 3891800 3922300 0 0 0 0 0 0 186 221 200 1041;1042;1043 755;756;757 755 3 3891800 4014900 0 0 0 0 0 0 AHHLDAHYITR DRERDLLERLITLGKAHHLDAHYITRLFQL TLGKAHHLDAHYITRLFQLIIEDSVLTQQA K A H T R L 2 1 0 1 0 0 0 0 3 1 1 0 0 0 0 0 1 0 1 0 0 0 11 0 0 2 1332.6687 P0A9J8 P0A9J8 65 75 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 8.7137E-12 117.98 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 4 3 484530000 85878000 141140000 0 0 141070000 116440000 0 0 187 166 201 1044;1045;1046;1047;1048;1049;1050;1051;1052;1053;1054 758;759;760;761;762;763;764;765;766;767;768 759 11 85878000 144470000 0 0 206250000 129570000 0 0 AHIDTFQR PCVWPRDELTVGGIKAHIDTFQRWLGDAFD LTVGGIKAHIDTFQRWLGDAFDNGISAEQL K A H Q R W 1 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 8 0 0 1 986.49338 P27249 P27249 38 45 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 1.9715E-34 155.51 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 164530000 39893000 48971000 0 0 41072000 34596000 0 0 188 320 202 1055;1056;1057;1058 769;770;771;772 771 4 39893000 50127000 0 0 49545000 38325000 0 0 AHIEKQA ______________________________ ______________________________ M A H Q A G 2 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 7 1 1 1 795.4239 P0A7W1 P0A7W1 2 8 rpsE 30S ribosomal protein S5 yes yes 2 0.0041681 54.525 By MS/MS By MS/MS 1 1 5771700 1758500 0 0 0 0 4013200 0 0 189 131 203 1059;1060 773 773 1 10615000 0 0 0 0 5720800 0 0 AHMVDVSAKAE ______________________________ AAGEAHMVDVSAKAETVREARAEAFVTMRS E A H A E T 3 0 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 2 0 0 11 1 0 3 1156.5547 P0A738 P0A738 13 23 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2;3 6.7257E-10 119.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 3 1 2 63462000 1364800 16427000 3519900 0 1879600 12437000 7121700 20712000 190 93 204;205 1061;1062;1063;1064;1065;1066;1067;1068;1069;1070;1071;1072 774;775;776;777;778;779 777 103 6 20970000 250510000 29908000 0 28938000 188500000 54810000 118860000 AHYVDIIFGPQTLHR GGCVASQEGEHIRQRAHYVDIIFGPQTLHR AHYVDIIFGPQTLHRLPEMINSVRGDRSPV R A H H R L 1 1 0 1 0 1 0 1 2 2 1 0 0 1 1 0 1 0 1 1 0 0 15 0 0 2 1765.9264 P0AEI1 P0AEI1 96 110 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 3 0.0014167 38.028 By MS/MS By MS/MS By MS/MS 2 1 1 13847000 5363700 4943400 0 0 3539500 0 0 0 191 237 206 1073;1074;1075;1076 780;781;782 780 3 5363700 5060100 0 0 4269700 0 0 0 AIAEATEAGLLGK FLRGEYIEAAVNLRRAIAEATEAGLLGKNI RRAIAEATEAGLLGKNIMGTGFDFELFVHT R A I G K N 4 0 0 0 0 0 2 2 0 1 2 1 0 0 0 0 1 0 0 0 0 0 13 0 2 4 1242.682 P31979 P31979 146 158 nuoF NADH-quinone oxidoreductase subunit F yes yes 2 0.001916 44.097 By MS/MS 1 0 0 0 0 0 0 0 0 0 192 336 207 1077 783 783 1 0 0 0 0 0 0 0 0 AIAHVER EDEHGTYIMNSKDLRAIAHVERLTKMGVHS IMNSKDLRAIAHVERLTKMGVHSLKIEGRT R A I E R L 2 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 7 0 1 2 794.43989 P76403 P76403 271 277 yegQ Uncharacterized protease YegQ yes yes 2 0.0022887 76.847 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 12708000 5490800 4751700 0 0 1419900 1046000 0 0 193 424 208 1078;1079;1080;1081 784 784 0 5490800 4863800 0 0 1712900 1158700 0 0 AIAQVGTISANSDETVGK VEELKALSVPCSDSKAIAQVGTISANSDET QVGTISANSDETVGKLIAEAMDKVGKEGVI K A I G K L 3 0 1 1 0 1 1 2 0 2 0 1 0 0 0 2 2 0 0 2 0 0 18 0 1 3 1759.8952 P0A6F5 P0A6F5 143 160 groL 60 kDa chaperonin yes yes 2;3 0 294.81 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 3 2 1 2219500000 588690000 416000000 0 0 508550000 703990000 0 2247300 194 68 209 1082;1083;1084;1085;1086;1087;1088;1089;1090;1091 785;786;787;788;789;790;791 786 7 588690000 425820000 0 0 637710000 779860000 0 12897000 AIASDCADGMTK ISYETATFPWAASGRAIASDCADGMTKLIF SGRAIASDCADGMTKLIFDKESHRVIGGAI R A I T K L 3 0 0 2 1 0 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 0 12 0 0 3 1238.5271 P0A9P0 P0A9P0 387 398 lpdA Dihydrolipoyl dehydrogenase yes yes 2 1.3854E-09 111.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 23790000 5200700 8305400 0 0 4598400 5685000 0 0 195 172 210 1092;1093;1094;1095;1096 792;793;794;795 795 4 5200700 8501400 0 0 5547100 6297700 0 0 AIDKPFLLPIEDVFSISGR ELAGFLDSYIPEPERAIDKPFLLPIEDVFS PFLLPIEDVFSISGRGTVVTGRVERGIIKV R A I G R G 1 1 0 2 0 0 1 1 0 3 2 1 0 2 2 2 0 0 0 1 0 0 19 1 1 3 2116.1568 P0CE48;P0CE47 P0CE48 206 224 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3 3.8545E-12 83.666 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 225000000 24711000 18644000 0 0 102740000 78904000 0 0 196 269 211 1097;1098;1099;1100 796;797;798;799 799 4 24711000 19084000 0 0 123940000 87408000 0 0 AIDLIDEAASSIR TLSHRYIADRQLPDKAIDLIDEAASSIRMQ DKAIDLIDEAASSIRMQIDSKPEELDRLDR K A I I R M 3 1 0 2 0 0 1 0 0 3 1 0 0 0 0 2 0 0 0 0 0 0 13 0 1 3 1372.7198 P63284-2;P63284 P63284-2 242 254 clpB Chaperone protein ClpB yes no 2 2.837E-07 104.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16069000 3708100 4690200 0 0 3969400 3701600 0 0 197 393 212 1101;1102;1103;1104 800;801;802;803;804 802 5 3708100 4800900 0 0 4788300 4100600 0 0 AIEAEPR GFLPAKSKGRRDALKAIEAEPRTLIFYEST KGRRDALKAIEAEPRTLIFYESTHRLLDSL K A I P R T 2 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 7 0 2 3 784.40792 P67087 P67087 158 164 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2 0.0033265 59.641 By MS/MS 1 0 0 0 0 0 0 0 0 0 198 400 213 1105 805 805 1 0 0 0 0 0 0 0 0 AIEAGHLHSMILWGPPGTGK IGQQHLLAAGKPLPRAIEAGHLHSMILWGP HLHSMILWGPPGTGKTTLAEVIARYANADV R A I G K T 2 0 0 0 0 0 1 4 2 2 2 1 1 0 2 1 1 1 0 0 0 0 20 0 1 4 2071.0673 P0AAZ4 P0AAZ4 44 63 rarA Replication-associated recombination protein A yes yes 3 0.0089069 26.237 By matching By MS/MS 1 1 10634000 6491600 4142100 0 0 0 0 0 0 199 189 214 1106;1107 806 806 1 6491600 4239900 0 0 0 0 0 0 AIEQTAITR ______________________________ ______________________________ M A I T R A 2 1 0 0 0 1 1 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 9 0 1 2 1001.5506 P18335 P18335 2 10 argD Acetylornithine/succinyldiaminopimelate aminotransferase yes yes 2 0.00074285 93.429 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39532000 9550600 14522000 0 0 7300600 8158800 0 0 200 291 215 1108;1109;1110;1111 807;808;809;810 807 4 9550600 14865000 0 0 8806700 9038100 0 0 AIFPNPDHTLLPGMFVR SDVTVDQTTGSITLRAIFPNPDHTLLPGMF FPNPDHTLLPGMFVRARLEEGLNPNAILVP R A I V R A 1 1 1 1 0 0 0 1 1 1 2 0 1 2 3 0 1 0 0 1 0 0 17 0 0 4 1924.0029 P0AE06 P0AE06 278 294 acrA Multidrug efflux pump subunit AcrA yes yes 3 5.3285E-11 73.022 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 77365000 24131000 12813000 0 0 16931000 23490000 0 0 201 232 216 1112;1113;1114;1115 811;812;813;814 812 1 24131000 13115000 0 0 20424000 26022000 0 0 AIHDVADLTR QYASRALQELGAGKRAIHDVADLTRGSLRI GAGKRAIHDVADLTRGSLRIAVTPTFTSYF R A I T R G 2 1 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 0 2 1109.5829 P27111 P27111 81 90 cynR HTH-type transcriptional regulator CynR yes yes 2;3 1.5704E-07 101.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 79412000 22098000 20839000 0 0 16924000 19551000 0 0 202 319 217 1116;1117;1118;1119;1120;1121;1122;1123 815;816;817;818;819;820;821 817 7 22098000 21330000 0 0 20416000 21658000 0 0 AIHYIGDLVQRTE DLELTVRSANCLKAEAIHYIGDLVQRTEVE AEAIHYIGDLVQRTEVELLKTPNLGKKSLT E A I T E V 1 1 0 1 0 1 1 1 1 2 1 0 0 0 0 0 1 0 1 1 0 0 13 1 0 1 1513.7889 P0A7Z4 P0A7Z4 274 286 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3 1.0339E-05 71.085 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 27102000 3254400 2659800 3612300 4827600 1729400 0 5757500 5261100 203 135 218 1124;1125;1126;1127;1128;1129;1130 822;823;824;825;826;827 826 6 50003000 40562000 30693000 36601000 26625000 0 44311000 30193000 AIIENSR GSLLEFDYHEVRTKRAIIENSRHVMLVVDH YHEVRTKRAIIENSRHVMLVVDHSKFGRNA R A I S R H 1 1 1 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 7 0 1 1 801.43447 P0ACL0 P0ACL0 194 200 glpR Glycerol-3-phosphate regulon repressor yes yes 2 0.002786 92.467 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 209560000 67805000 70580000 0 0 39084000 32092000 0 0 204 215 219 1131;1132;1133;1134 828;829;830;831 829 3 67805000 72246000 0 0 47148000 35550000 0 0 AIIPKNYARLE ______________________________ ______________________________ M A I L E S 2 1 1 0 0 0 1 0 0 2 1 1 0 0 1 0 0 0 1 0 0 0 11 2 0 3 1286.7347 P0AAQ2 P0AAQ2 2 12 yajD Uncharacterized protein YajD yes yes 2;3 3.5281E-06 92.062 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 931590000 145160000 117910000 59801000 0 81082000 90487000 194960000 242200000 205 188 220 1135;1136;1137;1138;1139;1140;1141;1142;1143;1144;1145;1146 832;833;834;835;836;837;838;839;840;841;842;843 835 12 2230300000 1798100000 508120000 0 1248300000 1371500000 1500400000 1390000000 AIISDVNASDEDR VALADKYFAKRAELKAIISDVNASDEDRWN LKAIISDVNASDEDRWNAVLKLQTLPRDSS K A I D R W 2 1 1 3 0 0 1 0 0 2 0 0 0 0 0 2 0 0 0 1 0 0 13 0 1 2 1403.6529 P0AG59 P0AG59 29 41 rpsN 30S ribosomal protein S14 yes yes 2 7.0376E-139 211.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 127710000 22637000 25754000 0 0 36557000 42766000 0 0 206 260 221 1147;1148;1149;1150 844;845;846;847 844 4 22637000 26362000 0 0 44098000 47376000 0 0 AIISDVNASDEDRWNAVLK VALADKYFAKRAELKAIISDVNASDEDRWN DVNASDEDRWNAVLKLQTLPRDSSPSRQRN K A I L K L 3 1 2 3 0 0 1 0 0 2 1 1 0 0 0 2 0 1 0 2 0 0 19 1 1 3 2115.0596 P0AG59 P0AG59 29 47 rpsN 30S ribosomal protein S14 yes yes 2;3 4.988E-143 203.85 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 362330000 81537000 83632000 0 0 96875000 100290000 0 0 207 260 222 1151;1152;1153;1154;1155;1156;1157;1158 848;849;850;851;852;853;854;855 853 8 81537000 85606000 0 0 116860000 111100000 0 0 AIKHGNILEIAQRENEA KLCHAARQLLEQTLPAIKHGNILEIAQREN KHGNILEIAQRENEATCFGRRTPDDSFLEW P A I E A T 3 1 2 0 0 1 3 1 1 3 1 1 0 0 0 0 0 0 0 0 0 0 17 2 3 2 1905.0068 P77398 P77398 179 195 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3;4 3.0907E-29 123.02 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 1203600000 50494000 70634000 0 0 617790000 464690000 0 0 208 432 223 1159;1160;1161;1162;1163;1164;1165;1166;1167;1168;1169;1170;1171 856;857;858;859;860;861;862;863 861 8 304810000 422750000 0 0 879540000 662420000 0 0 AILAAAGIAEDVK IALTSIYGVGKTRSKAILAAAGIAEDVKIS SKAILAAAGIAEDVKISELSEGQIDTLRDE K A I V K I 5 0 0 1 0 0 1 1 0 2 1 1 0 0 0 0 0 0 0 1 0 0 13 0 1 5 1240.7027 P0A7S9 P0A7S9 32 44 rpsM 30S ribosomal protein S13 yes yes 2 6.3467E-14 118.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 223450000 57969000 41241000 0 0 64004000 57641000 0 2597800 209 123 224 1172;1173;1174;1175;1176;1177;1178;1179;1180 864;865;866;867 865 4 100170000 96448000 0 0 121850000 114870000 0 14909000 AIMVAHNANFDHSFMMAAAER FKVVRKGIKASGCNRAIMVAHNANFDHSFM NANFDHSFMMAAAERASLKRNPFHPFATFD R A I E R A 6 1 2 1 0 0 1 0 2 1 0 0 3 2 0 1 0 0 0 1 0 0 21 0 1 6 2333.0504 P30014 P30014 115 135 rnt Ribonuclease T yes yes 3 1.3111E-06 57.496 By matching By MS/MS By matching 1 1 1 17212000 5628100 0 0 0 5771600 5812600 0 0 210 330 225 1181;1182;1183 868 868 1 5628100 0 0 0 6962300 6439000 0 0 AIMVNGR FGATRAEARQLVSHKAIMVNGRVVNIASYQ ARQLVSHKAIMVNGRVVNIASYQVSPNDVV K A I G R V 1 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 7 0 0 1 759.40614 P0A7V8 P0A7V8 122 128 rpsD 30S ribosomal protein S4 yes yes 2 5.4428E-07 120.76 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 36520000 10600000 12382000 379160 0 4917000 8242200 0 0 211 130 226 1184;1185;1186;1187;1188;1189 869;870;871;872 870 4 10600000 12674000 3221700 0 5931500 24956000 0 0 AINGILDDGKDTP LDAVIDYLPSPVDVPAINGILDDGKDTPAE VPAINGILDDGKDTPAERHASDDEPFSALA P A I T P A 1 0 1 3 0 0 0 2 0 2 1 1 0 0 1 0 1 0 0 0 0 0 13 1 0 1 1327.662 P0A6M8 P0A6M8 294 306 fusA Elongation factor G yes yes 2 0.011408 38.303 By MS/MS By MS/MS 1 1 3427200 0 0 0 0 1509400 1917900 0 0 212 76 227 1190;1191 873 873 1 0 0 0 0 2148800 2733900 0 0 AINHDFR FLDLEKSRRRLRRDKAINHDFRQLEKYLEP RRRLRRDKAINHDFRQLEKYLEPIPKADWE K A I F R Q 1 1 1 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 7 0 0 1 871.43005 P27294 P27294 186 192 inaA Protein InaA yes yes 2 0.00067986 100.74 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 39429000 10020000 12800000 0 0 6960700 9648100 0 0 213 321 228 1192;1193;1194;1195;1196;1197;1198 874;875;876 874 2 20100000 22199000 0 0 8396800 11989000 0 0 AINVSDQVPAK NQRQNFTRFVVLARKAINVSDQVPAKTTLL LARKAINVSDQVPAKTTLLMATGQQAGALV K A I A K T 2 0 1 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 2 0 0 11 0 0 3 1140.6139 P0A9J8 P0A9J8 287 297 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 8.8713E-32 152.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 639720000 197200000 145540000 0 0 133040000 163930000 0 0 214 166 229 1199;1200;1201;1202 877;878;879;880 878 4 197200000 148970000 0 0 160480000 181600000 0 0 AIQVTTGAK NRVTQVKDLANDGYRAIQVTTGAKKANRVT ANDGYRAIQVTTGAKKANRVTKPEAGHFAK R A I A K K 2 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 9 0 0 2 887.50763 P60438 P60438 47 55 rplC 50S ribosomal protein L3 yes yes 2 0.00092927 91.318 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 234760000 59688000 73522000 0 0 49030000 52522000 0 0 215 380 230 1203;1204;1205;1206 881;882;883;884 883 4 59688000 75257000 0 0 59145000 58182000 0 0 AIRDILRSALAQE LDSLSQRRGYNNRSEAIRDILRSALAQEAT SEAIRDILRSALAQEATQQHGTQGFAVLSY E A I Q E A 3 2 0 1 0 1 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 13 2 0 3 1454.8205 P0A6Z6 P0A6Z6 31 43 nikR Nickel-responsive regulator yes yes 3 2.2641E-11 81.278 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 25998000 1052000 1235000 2768600 3202300 3591900 4325600 1581200 8241200 216 89 231 1207;1208;1209;1210;1211;1212;1213;1214 885;886;887 886 3 16163000 18834000 23525000 24279000 55301000 65561000 12169000 47295000 AIRRISNEE LPNVRTLTLSGMLAEAIRRISNEESISAMF SGMLAEAIRRISNEESISAMFEH_______ E A I E E S 1 2 1 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 9 2 1 1 1086.5782 P0A717 P0A717 299 307 prs Ribose-phosphate pyrophosphokinase yes yes 3 0.0085419 58.981 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 126080000 8251100 8459800 20881000 20258000 3736700 7288500 22523000 34680000 217 91 232 1215;1216;1217;1218;1219;1220;1221;1222 888;889;890;891 889 3 126780000 129010000 177420000 153580000 57531000 110470000 173340000 199020000 AISLAPPLLER TLLPAAIATQHDGLKAISLAPPLLERTAVL DGLKAISLAPPLLERTAVLLRRKNSWQTAA K A I E R T 2 1 0 0 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1 4 1178.7023 P27111 P27111 253 263 cynR HTH-type transcriptional regulator CynR yes yes 2 8.3389E-08 113.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52087000 13508000 12076000 0 0 11713000 14791000 0 0 218 319 233 1223;1224;1225;1226 892;893;894;895 892 4 13508000 12361000 0 0 14130000 16385000 0 0 AISLSVR DEVEAKFTGVDRKNRAISLSVRAKDEADEK TGVDRKNRAISLSVRAKDEADEKDAIATVN R A I V R A 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 7 0 0 1 744.44939 P0AG67 P0AG67 514 520 rpsA 30S ribosomal protein S1 yes yes 2 0.00016807 110.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51032000 14558000 13053000 0 0 8827300 14594000 0 0 219 261 234 1227;1228;1229;1230 896;897;898;899 896 4 14558000 13361000 0 0 10648000 16166000 0 0 AITDYGVTGR ______________________________ PEMFRAITDYGVTGRAVKNGLLSIQSWSPR R A I G R A 1 1 0 1 0 0 0 2 0 1 0 0 0 0 0 0 2 0 1 1 0 0 10 0 0 1 1051.5298 P0A873 P0A873 15 24 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 1.413E-12 107.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 220 140 235 1231;1232;1233;1234 900;901;902;903 902 4 0 0 0 0 0 0 0 0 AITESGLR AMLVANDQMALGAMRAITESGLRVGADISV MALGAMRAITESGLRVGADISVVGYDDTED R A I L R V 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 0 1 1 845.46068 B8LFD5;P03023 B8LFD5 259 266 lacI Lactose operon repressor yes no 2 0.0046726 48.787 By MS/MS By MS/MS By MS/MS 1 1 1 5747500 0 0 0 0 2784800 2962700 0 0 221 0 236 1235;1236;1237 904;905 904 2 0 0 0 0 3359300 3282000 0 0 AITIDFVR GALNRVIANANFTGRAITIDFVREALRDLL NANFTGRAITIDFVREALRDLLALQEKLVT R A I V R E 1 1 0 1 0 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 8 0 0 1 933.52837 P03004 P03004 353 360 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.0042046 64.757 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25134000 6927600 6043600 0 0 5388400 6774100 0 0 222 40 237 1238;1239;1240;1241 906;907 907 2 6927600 6186300 0 0 6500100 7504200 0 0 AITQLILNLVEGSPIK PRLDNLNAARIGSSRAITQLILNLVEGSPI ITQLILNLVEGSPIKLIDGGKQKRCFTDIR R A I I K L 1 0 1 0 0 1 1 1 0 3 3 1 0 0 1 1 1 0 0 1 0 0 16 0 1 2 1708.0135 P77398 P77398 511 526 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 0 311.71 By MS/MS By MS/MS By MS/MS By MS/MS 2 4 6 4 3651500000 665460000 420060000 0 0 80413000 2485600000 0 0 223 432 238 1242;1243;1244;1245;1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257 908;909;910;911;912;913;914;915;916 908 8 665460000 429980000 0 0 97002000 2753400000 0 0 AITYLLE DGINQVQCSVAEYPEAITYLLEQYDRVEAE CSVAEYPEAITYLLEQYDRVEAEEARLSDL E A I L E Q 1 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 1 0 1 0 0 0 7 0 0 1 821.45347 P00579 P00579 140 146 rpoD RNA polymerase sigma factor RpoD yes yes 1 2.7132E-46 137.44 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 271760000 58297000 57493000 36619000 46240000 12142000 15768000 45204000 0 224 27 239 1258;1259;1260;1261;1262;1263;1264 917;918 917 1 895720000 876780000 311150000 350570000 186930000 238990000 347900000 0 AIVTIGSKE WYQDRYDVEIDPESEAIVTIGSKEGLAHLM IDPESEAIVTIGSKEGLAHLMLATLDHGDT E A I K E G 1 0 0 0 0 0 1 1 0 2 0 1 0 0 0 1 1 0 0 1 0 0 9 1 0 1 916.52295 P77434 P77434 101 109 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 0.023242 41.448 By MS/MS By matching By MS/MS 1 1 1 7204400 0 0 0 1227700 0 0 2915000 3061800 225 433 240 1265;1266;1267 919 919 0 0 0 0 9307600 0 0 22434000 17571000 AKAAGKLLKEE TGWYDVDLSEKGVSEAKAAGKLLKEEGYSF GVSEAKAAGKLLKEEGYSFDFAYTSVLKRA E A K E E G 3 0 0 0 0 0 2 1 0 0 2 3 0 0 0 0 0 0 0 0 0 0 11 3 1 3 1156.6816 P62707 P62707 38 48 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase yes yes 3 0.0062756 44.847 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 41406000 1429800 1304300 6700400 5709600 866800 1005300 10866000 13523000 226 390 241 1268;1269;1270;1271;1272;1273;1274;1275 920;921 921 2 21968000 19891000 56932000 43287000 13345000 15237000 83630000 77607000 AKALRKLRHPSRSE GKQFDVTRERIRQIEAKALRKLRHPSRSEV EAKALRKLRHPSRSEVLRSFLDD_______ E A K S E V 2 3 0 0 0 0 1 0 1 0 2 2 0 0 1 2 0 0 0 0 0 0 14 5 0 3 1647.9645 P00579 P00579 592 605 rpoD RNA polymerase sigma factor RpoD yes yes 4 0.00066638 41.644 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 86279000 0 0 9259600 11709000 0 0 25424000 39886000 227 27 242 1276;1277;1278;1279 922;923;924;925 922 3 0 0 78677000 88771000 0 0 195670000 228900000 AKDEADEKDAIATVNK TGVDRKNRAISLSVRAKDEADEKDAIATVN KDEADEKDAIATVNKQEDANFSNNAMAEAF R A K N K Q 4 0 1 3 0 0 2 0 0 1 0 3 0 0 0 0 1 0 0 1 0 0 16 2 2 4 1716.853 P0AG67 P0AG67 521 536 rpsA 30S ribosomal protein S1 yes yes 3 0.00013154 62.203 By MS/MS By MS/MS By MS/MS 1 1 1 50516000 12593000 17666000 0 0 20257000 0 0 0 228 261 243 1280;1281;1282 926;927 927 2 12593000 18083000 0 0 24436000 0 0 0 AKGQSLQDP ______________________________ ______________________________ M A K D P F 1 0 0 1 0 2 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 0 1 942.47706 P0A6X3 P0A6X3 2 10 hfq RNA-binding protein Hfq yes yes 2 2.6679E-23 146.54 By MS/MS By MS/MS By MS/MS 1 1 1 150300000 25875000 0 55538000 68891000 0 0 0 0 229 84 244 1283;1284;1285 928 928 0 156200000 0 471900000 522300000 0 0 0 0 AKGQSLQDPFLNALR ______________________________ AKGQSLQDPFLNALRRERVPVSIYLVNGIK M A K L R R 2 1 1 1 0 2 0 1 0 0 3 1 0 1 1 1 0 0 0 0 0 0 15 1 0 3 1656.8948 P0A6X3 P0A6X3 2 16 hfq RNA-binding protein Hfq yes yes 2;3 3.892E-126 253.76 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 870350000 309760000 241930000 0 0 135400000 183260000 0 0 230 84 245 1286;1287;1288;1289;1290;1291;1292;1293;1294 929;930;931;932;933;934;935;936 932 8 318820000 247640000 0 0 163330000 203020000 0 0 AKGQSLQDPFLNALRR ______________________________ KGQSLQDPFLNALRRERVPVSIYLVNGIKL M A K R R E 2 2 1 1 0 2 0 1 0 0 3 1 0 1 1 1 0 0 0 0 0 0 16 2 0 3 1812.9959 P0A6X3 P0A6X3 2 17 hfq RNA-binding protein Hfq yes yes 3;4 2.9216E-16 97.417 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 151140000 56517000 41378000 6698000 7557500 17126000 21866000 0 0 231 84 246 1295;1296;1297;1298;1299;1300;1301;1302;1303;1304;1305 937;938;939;940;941;942;943 937 7 56517000 42355000 56912000 57297000 20660000 24222000 0 0 AKGQSLQDPFLNALRRE ______________________________ GQSLQDPFLNALRRERVPVSIYLVNGIKLQ M A K R E R 2 2 1 1 0 2 1 1 0 0 3 1 0 1 1 1 0 0 0 0 0 0 17 3 0 3 1942.0385 P0A6X3 P0A6X3 2 18 hfq RNA-binding protein Hfq yes yes 3;4 2.5044E-24 105.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 294940000 39971000 42131000 11027000 12465000 53291000 54033000 30379000 51647000 232 84 247 1306;1307;1308;1309;1310;1311;1312;1313;1314;1315;1316;1317;1318;1319;1320;1321 944;945;946;947;948;949;950;951;952;953 945 10 614140000 642500000 93697000 94505000 820460000 818950000 233810000 296390000 AKHPLFVTNVDDTR VADWQIAAILNIGQRAKHPLFVTNVDDTRL RAKHPLFVTNVDDTRLDDIAAWTYRAPVED R A K T R L 1 1 1 2 0 0 0 0 1 0 1 1 0 1 1 0 2 0 0 2 0 0 14 1 0 2 1611.8369 P33602 P33602 425 438 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 9.4104E-12 101.2 By MS/MS By matching 1 1 77185000 30243000 46943000 0 0 0 0 0 0 233 345 248 1322;1323 954 954 1 30243000 48051000 0 0 0 0 0 0 AKIELSSAQQTDVNLPYITADATGPK NDPLAMQRLKEAAEKAKIELSSAQQTDVNL DVNLPYITADATGPKHMNIKVTRAKLESLV K A K P K H 4 0 1 2 0 2 1 1 0 2 2 2 0 0 2 2 3 0 1 1 0 0 26 1 1 6 2730.4076 P0A6Y8 P0A6Y8 269 294 dnaK Chaperone protein DnaK yes yes 3 1.2712E-11 68.386 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37966000 6435900 6862900 0 0 12240000 12428000 0 0 234 86 249 1324;1325;1326;1327 955;956 956 2 6435900 7024900 0 0 14765000 13767000 0 0 AKKLRRGDYSPE EGPVKYVRPDVSHFEAKKLRRGDYSPELFL HFEAKKLRRGDYSPELFLDLHGLTQLQAKQ E A K P E L 1 2 0 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 1 0 0 0 12 4 0 2 1418.763 P0A8B2 P0A8B2 84 95 yfcN UPF0115 protein YfcN yes yes 3 0.0074671 42.843 By matching By MS/MS By MS/MS 1 1 1 19604000 0 0 4762500 0 0 0 7989600 6852000 235 142 250 1328;1329;1330 957;958 958 2 0 0 40466000 0 0 0 61490000 39322000 AKLDANLK VAIHGKLVELMPQSRAKLDANLKDFEAQLA ELMPQSRAKLDANLKDFEAQLASTETQVGN R A K L K D 2 0 1 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 1 0 2 871.51272 P39172 P39172 171 178 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 8.7379E-25 148.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 53598000 16634000 16315000 0 0 10582000 10067000 0 0 236 361 251 1331;1332;1333;1334 959;960;961;962 959 4 16634000 16700000 0 0 12765000 11152000 0 0 AKLESLVEDLVNR ADATGPKHMNIKVTRAKLESLVEDLVNRSI TRAKLESLVEDLVNRSIEPLKVALQDAGLS R A K N R S 1 1 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 13 1 2 1 1484.8199 P0A6Y8 P0A6Y8 303 315 dnaK Chaperone protein DnaK yes yes 2;3 9.3711E-295 300.78 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1342600000 343050000 305800000 0 0 347700000 346010000 0 0 237 86 252 1335;1336;1337;1338;1339;1340;1341;1342;1343 963;964;965;966;967;968;969;970 969 8 347460000 313020000 0 0 419430000 383300000 0 0 AKLHDYYKDE ______________________________ ______________________________ M A K D E V 1 0 0 2 0 0 1 0 1 0 1 2 0 0 0 0 0 0 2 0 0 0 10 2 0 1 1280.6037 P62399 P62399 2 11 rplE 50S ribosomal protein L5 yes yes 3 0.0014784 70.488 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 168250000 12400000 18542000 2012400 1411700 14331000 13058000 50974000 55516000 238 388 253 1344;1345;1346;1347;1348;1349;1350;1351;1352;1353;1354;1355 971;972;973;974;975 972 5 134800000 221070000 17099000 10703000 170000000 155490000 392310000 318600000 AKLVHDLRE GIDALLRRSFESDAEAKLVHDLREDGFLTL FESDAEAKLVHDLREDGFLTLGLVATDDEG E A K R E D 1 1 0 1 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 9 2 0 1 1079.6087 P63417 P63417 28 36 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 2;3 0.012661 63.216 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 286630000 18715000 13647000 57131000 49621000 8269400 6772600 65772000 66700000 239 394 254 1356;1357;1358;1359;1360;1361;1362;1363;1364;1365;1366;1367;1368;1369;1370;1371 976;977;978;979;980 979 5 287560000 208120000 485430000 376200000 127320000 102650000 506200000 382780000 AKPEVWQTLAAK DEAVALLQMTPFAWRAKPEVWQTLAAKEVF AWRAKPEVWQTLAAKEVFDCQTDFNIHLWQ R A K A K E 3 0 0 0 0 1 1 0 0 0 1 2 0 0 1 0 1 1 0 1 0 0 12 1 1 4 1340.7452 P36999 P36999 240 251 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 1.7303E-36 152.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 897710000 284480000 211290000 0 0 159620000 242320000 0 0 240 352 255 1372;1373;1374;1375;1376;1377;1378;1379 981;982;983;984;985;986;987;988 981 8 284480000 216280000 0 0 192550000 268440000 0 0 AKPGMDSLAPE KNPHQHQSPLHDSSEAKPGMDSLAPEDGSH DSSEAKPGMDSLAPEDGSHRPAAEPTPPGA E A K P E D 2 0 0 1 0 0 1 1 0 0 1 1 1 0 2 1 0 0 0 0 0 0 11 1 0 4 1114.5329 P21179 P21179 22 32 katE Catalase HPII yes yes 2 0.00053661 69.812 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 54791000 13421000 13285000 0 6900200 4480300 4338100 7343900 5022000 241 293 256 1380;1381;1382;1383;1384;1385;1386 989;990 989 2 206220000 202610000 0 52314000 68979000 65751000 56520000 28821000 AKPGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNE KNPHQHQSPLHDSSEAKPGMDSLAPEDGSH PTAPGSLKAPDTRNEKLNSLEDVRKGSENY E A K N E K 7 2 1 3 0 1 3 4 1 0 2 2 1 0 9 3 3 0 0 0 0 0 42 4 2 16 4218.04 P21179 P21179 22 63 katE Catalase HPII yes yes 4;5;6 2.8089E-09 59.93 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 4 3 5 2 2 3 1 475390000 125450000 90325000 57979000 74791000 27770000 37696000 50507000 10877000 242 293 257;258 1387;1388;1389;1390;1391;1392;1393;1394;1395;1396;1397;1398;1399;1400;1401;1402;1403;1404;1405;1406;1407;1408;1409;1410;1411 991;992;993;994;995;996;997;998;999;1000;1001;1002;1003;1004;1005;1006;1007;1008;1009;1010;1011;1012 997 251 22 1927400000 1377500000 492640000 567030000 427550000 571340000 388710000 62420000 AKQDYYEILGVSK ______________________________ ______________________________ M A K S K T 1 0 0 1 0 1 1 1 0 1 1 2 0 0 0 1 0 0 2 1 0 0 13 1 1 1 1512.7824 P08622 P08622 2 14 dnaJ Chaperone protein DnaJ yes yes 2;3 6.2635E-57 166.62 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 108170000 36394000 21198000 0 0 23428000 27150000 0 0 243 61 259 1412;1413;1414;1415;1416;1417;1418;1419;1420;1421 1013;1014;1015;1016;1017;1018;1019 1015 7 49108000 32465000 0 0 28261000 49253000 0 0 AKQDYYEILGVSKTA ______________________________ AKQDYYEILGVSKTAEEREIRKAYKRLAMK M A K T A E 2 0 0 1 0 1 1 1 0 1 1 2 0 0 0 1 1 0 2 1 0 0 15 2 1 1 1684.8672 P08622 P08622 2 16 dnaJ Chaperone protein DnaJ yes yes 3 0.0012962 36.638 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20467000 1249500 1496300 0 0 10277000 7444200 0 0 244 61 260 1422;1423;1424;1425 1020;1021 1021 2 7542900 8955400 0 0 14631000 10612000 0 0 AKRNEQDQKQLIVP AKITGPKNENIKTLPAKRNEQDQKQLIVPL PAKRNEQDQKQLIVPLADSLKPGTYTVDWH P A K V P L 1 1 1 1 0 3 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 0 14 3 1 1 1665.9162 P0AA57 P0AA57 78 91 yobA Protein YobA yes yes 3 0.0019654 50.563 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 21875000 3940200 4675200 0 0 8476300 4783700 0 0 245 184 261 1426;1427;1428;1429;1430;1431;1432;1433 1022;1023 1023 2 7652100 8024800 0 0 11576000 6024800 0 0 AKTACEVAEISYK LGLFEEGQERSAWVRAKTACEVAEISYKKF VRAKTACEVAEISYKKFRQLIQVNPDILMR R A K Y K K 3 0 0 0 1 0 2 0 0 1 0 2 0 0 0 1 1 0 1 1 0 0 13 1 2 3 1468.7232 P0ACJ8 P0ACJ8 89 101 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3 6.5861E-09 98.105 By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 80929000 27513000 28573000 0 0 10275000 14568000 0 0 246 213 262 1434;1435;1436;1437;1438;1439;1440;1441;1442 1024;1025;1026;1027;1028 1025 5 27513000 29248000 0 0 12394000 16138000 0 0 AKTACEVAEISYKK LGLFEEGQERSAWVRAKTACEVAEISYKKF RAKTACEVAEISYKKFRQLIQVNPDILMRL R A K K K F 3 0 0 0 1 0 2 0 0 1 0 3 0 0 0 1 1 0 1 1 0 0 14 2 2 3 1596.8181 P0ACJ8 P0ACJ8 89 102 crp cAMP-activated global transcriptional regulator CRP yes yes 3 6.7008E-14 111.64 By MS/MS By MS/MS By matching 1 1 1 30400000 15371000 14123000 0 0 905760 0 0 0 247 213 263 1443;1444;1445 1029;1030 1029 2 15371000 14456000 0 0 1289500 0 0 0 AKVQQAIDTITLLQME ______________________________ KVQQAIDTITLLQMEIEELKEKNNSLSQEV E A K M E I 2 0 0 1 0 3 1 0 0 2 2 1 1 0 0 0 2 0 0 1 0 0 16 1 0 2 1800.9655 P0AF36 P0AF36 13 28 zapB Cell division protein ZapB yes yes 2 1.6155E-80 176.8 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 84247000 1170500 2776900 680890 1356900 29156000 44845000 0 4260900 248 242 264;265 1446;1447;1448;1449;1450;1451;1452;1453;1454;1455 1031;1032;1033;1034;1035 1034 213 4 17984000 42349000 5785500 10288000 448890000 679700000 0 24452000 AKYNPFADLKAMMNKKK TTVIAGEDAQKDVGEAKYNPFADLKAMMNK YNPFADLKAMMNKKK_______________ E A K K K - 3 0 2 1 0 0 0 0 0 0 1 5 2 1 1 0 0 0 1 0 0 0 17 4 0 4 1997.0591 P0AAQ2 P0AAQ2 99 115 yajD Uncharacterized protein YajD yes yes 4 1.7559E-08 75.018 By MS/MS By MS/MS By MS/MS 1 1 1 43007000 3772000 0 0 0 20949000 18287000 0 0 249 188 266 1456;1457;1458 1036;1037;1038;1039 1037 4 57955000 0 0 0 322520000 277170000 0 0 ALAAALGQIEK ______________________________ NKQKALAAALGQIEKQFGKGSIMRLGEDRS K A L E K Q 4 0 0 0 0 1 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1 4 1083.6288 P0A7G6 P0A7G6 10 20 recA Protein RecA yes yes 2 1.9364E-05 101.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 107500000 27038000 29404000 0 0 23113000 27941000 0 0 250 104 267 1459;1460;1461;1462;1463 1040;1041;1042;1043 1043 4 27038000 54172000 0 0 27881000 30953000 0 0 ALAEDFSDKHHALFLGRGDQYPIALE PSRIEQMLSQDKRIEALAEDFSDKHHALFL ALFLGRGDQYPIALEGALKLKEISYIHAEA E A L L E G 4 1 0 3 0 1 2 2 2 1 4 1 0 2 1 1 0 0 1 0 0 0 26 2 1 5 2912.4457 P17169 P17169 457 482 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 4.0635E-31 100.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 621530000 6846800 10204000 0 0 286240000 315130000 0 3106300 251 288 268 1464;1465;1466;1467;1468;1469;1470;1471 1044;1045;1046;1047;1048;1049;1050;1051 1050 8 105200000 155620000 0 0 4406900000 4776300000 0 17827000 ALAEHGIVFGEPK SKALLHVAKVIEEAKALAEHGIVFGEPKTD AKALAEHGIVFGEPKTDIDKIRTWKEKVIN K A L P K T 2 0 0 0 0 0 2 2 1 1 1 1 0 1 1 0 0 0 0 1 0 0 13 0 2 3 1366.7245 P0A9P0 P0A9P0 68 80 lpdA Dihydrolipoyl dehydrogenase yes yes 3 1.7734E-05 61.212 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 104150000 30672000 22793000 0 0 24005000 26685000 0 0 252 172 269 1472;1473;1474;1475 1052;1053;1054;1055 1053 0 30672000 23331000 0 0 28957000 29562000 0 0 ALAFHPR YAPDRRMGVEMTLLRALAFHPRMPLPEPEV GVEMTLLRALAFHPRMPLPEPEVPRQSFAP R A L P R M 2 1 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 7 0 0 3 810.45006 P06710 P06710 356 362 dnaX DNA polymerase III subunit tau yes yes 2 6.1844E-05 114.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 47154000 11598000 15132000 0 0 11663000 8761800 0 0 253 51 270 1476;1477;1478;1479 1056;1057;1058;1059 1058 4 11598000 15489000 0 0 14069000 9706200 0 0 ALAFNGIDPNDPDRGAVSE HFHVEPFVGANLQPEALAFNGIDPNDPDRG NGIDPNDPDRGAVSEYEALHEIFKVVRKGI E A L S E Y 3 1 2 3 0 0 1 2 0 1 1 0 0 1 2 1 0 0 0 1 0 0 19 1 0 5 1956.9177 P30014 P30014 74 92 rnt Ribonuclease T yes yes 2 1.6754E-06 62.258 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 2 2 2 2 42361000 5005100 6378000 6699400 5301100 5955400 6652300 0 6370300 254 330 271 1480;1481;1482;1483;1484;1485;1486;1487;1488;1489;1490;1491;1492 1060;1061;1062 1061 2 69340000 91750000 56924000 40191000 91688000 63177000 0 36558000 ALANDSAWHR NGVGENHWSAAILKRALANDSAWHRLSEKE AILKRALANDSAWHRLSEKEFAHLQTLLPK R A L H R L 3 1 1 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 10 0 0 3 1139.5472 P0AED9 P0AED9 53 62 dcm DNA-cytosine methyltransferase yes yes 2;3 1.324E-28 151.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 230050000 54365000 93140000 0 0 38787000 42313000 1447500 0 255 235 272 1493;1494;1495;1496;1497;1498;1499;1500;1501 1063;1064;1065;1066;1067;1068;1069 1065 6 54365000 95338000 0 0 46789000 46873000 11140000 0 ALDFIAER VHAIGKTRSIERINKALDFIAERENQQ___ SIERINKALDFIAERENQQ___________ K A L E R E 2 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 1 2 933.49198 P04805 P04805 460 467 gltX Glutamate--tRNA ligase yes yes 2 9.9237E-10 110.31 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 32353000 678270 0 0 0 14440000 17235000 0 0 256 45 273 1502;1503;1504;1505;1506;1507 1070;1071;1072;1073 1071 4 4094400 0 0 0 17419000 19301000 0 0 ALDFLLEQGFVHK LREAEPQAKPPTVYRALDFLLEQGFVHKVE YRALDFLLEQGFVHKVESTNSYVLCHLFDQ R A L H K V 1 0 0 1 0 1 1 1 1 0 3 1 0 2 0 0 0 0 0 1 0 0 13 0 1 1 1515.8086 P0AC51 P0AC51 66 78 zur Zinc uptake regulation protein yes yes 2;3 6.8088E-47 161.76 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 77239000 17699000 20618000 0 0 21446000 17476000 0 0 257 204 274 1508;1509;1510;1511;1512;1513;1514;1515 1074;1075;1076;1077;1078;1079;1080;1081 1081 8 17699000 21104000 0 0 25870000 19360000 0 0 ALDHLSVRPLEAINLIR NGELSGHNLGNLMLKALDHLSVRPLEAINL DHLSVRPLEAINLIRNLLKVDTHLIPMSEH K A L I R N 2 2 1 1 0 0 1 0 1 2 4 0 0 0 1 1 0 0 0 1 0 0 17 1 1 3 1929.116 P75767 P75767 103 119 ybhK Putative gluconeogenesis factor yes yes 4 0.0018089 34.954 By MS/MS By MS/MS By matching By matching 1 1 1 1 11637000 2908200 3335100 0 0 2141700 3251800 0 0 258 407 275 1516;1517;1518;1519 1082;1083 1082 2 2908200 3413800 0 0 2583500 3602300 0 0 ALDILTATPPDVFNHNLENVPR KIETLVPDFRGRMDRALDILTATPPDVFNH TPPDVFNHNLENVPRIYRQVRPGADYNWSL R A L P R I 2 1 3 2 0 0 1 0 1 1 3 0 0 1 3 0 2 0 0 2 0 0 22 0 1 5 2445.2652 P60716 P60716 179 200 lipA Lipoyl synthase yes yes 3 1.5046E-06 53.359 By MS/MS By MS/MS By matching 1 1 1 112340000 0 44479000 0 0 24798000 43063000 0 0 259 382 276 1520;1521;1522 1084 1084 1 0 45529000 0 0 29914000 47705000 0 0 ALDIRPPAQPLALVSGAR DYAIPVTNGSGAVGKALDIRPPAQPLALVS IRPPAQPLALVSGARTQFTGDTASLLVENG K A L A R T 4 2 0 1 0 1 0 1 0 1 3 0 0 0 3 1 0 0 0 1 0 0 18 1 0 7 1844.0632 P0A903 P0A903 79 96 bamC Outer membrane protein assembly factor BamC yes yes 3 0.016598 25.186 By MS/MS By MS/MS 1 1 6925400 0 0 0 0 2658900 4266400 0 0 260 156 277 1523;1524 1085;1086 1086 2 0 0 0 0 3207500 4726300 0 0 ALDVEQIR LPVTILSRCLQFHLKALDVEQIRHQLEHIL CLQFHLKALDVEQIRHQLEHILNEEHIAHE K A L I R H 1 1 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 1 1 942.51345 P06710 P06710 177 184 dnaX DNA polymerase III subunit tau yes yes 2 1.6531E-11 127.12 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 105880000 34894000 29260000 0 0 19998000 19797000 0 1933700 261 51 278 1525;1526;1527;1528;1529 1087;1088;1089;1090 1089 4 34894000 29950000 0 0 24124000 21930000 0 11097000 ALEEAGAEVEVK LKEGVSKDDAEALKKALEEAGAEVEVK___ LKKALEEAGAEVEVK_______________ K A L V K - 3 0 0 0 0 0 4 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 12 0 4 3 1243.6296 P0A7K2 P0A7K2 110 121 rplL 50S ribosomal protein L7/L12 yes yes 2 3.1167E-10 115.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 34259000 9610300 7988200 0 0 6925100 9734900 0 0 262 108 279 1530;1531;1532;1533;1534 1091;1092;1093;1094 1091 4 9610300 8176800 0 0 19303000 10784000 0 0 ALEEANADLEVK QNLNDRLASYLDKVRALEEANADLEVKIRD KVRALEEANADLEVKIRDWYQRQRPAEIKD R A L V K I 3 0 1 1 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 12 0 3 3 1300.6511 CON__P02533;CON__Q6IFX2;CON__P19012;CON__P08779 CON__P02533 135 146 no no 2 1.8417E-26 140.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 68606000 12585000 12752000 0 0 20064000 23205000 0 0 + 263 4;10 280 1535;1536;1537;1538 1095;1096;1097;1098 1097 4 12585000 13053000 0 0 24203000 25706000 0 0 ALEESNYELEGK QNLNDRLASYLDKVRALEESNYELEGKIKE KVRALEESNYELEGKIKEWYEKHGNSHQGE R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 12 0 4 1 1380.6409 CON__P13645;CON__P02535-1 CON__P13645 166 177 yes no 2 6.2056E-85 188.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1177200000 136200000 139350000 0 0 391730000 509960000 0 0 + 264 12 281 1539;1540;1541;1542 1099;1100;1101;1102 1101 4 136200000 142640000 0 0 472550000 564920000 0 0 ALEGDAEWEAK FPGDDTPIVRGSALKALEGDAEWEAKILEL SALKALEGDAEWEAKILELAGFLDSYIPEP K A L A K I 3 0 0 1 0 0 3 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 11 0 3 3 1217.5564 P0CE48;P0CE47 P0CE48 178 188 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 0.00011829 101.65 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 96579000 25247000 19364000 0 0 24585000 27382000 0 0 265 269 282 1543;1544;1545;1546 1103;1104;1105 1103 3 25247000 19821000 0 0 29657000 30333000 0 0 ALEIEEMQLK DVQVFTRDGVEKDKRALEIEEMQLKQAKKD EKDKRALEIEEMQLKQAKKDLSEELQILEA R A L L K Q 1 0 0 0 0 1 3 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 10 0 3 1 1202.6217 P0A8V2 P0A8V2 945 954 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0080397 69.825 By MS/MS By matching By MS/MS 1 1 1 22710000 7908000 0 0 0 7442900 7359200 0 0 266 154 283 1547;1548;1549 1106;1107 1106 0 7908000 0 0 0 8978300 8152300 0 0 ALEVADK KFINELLPVIDSLDRALEVADKANPDMSAM PVIDSLDRALEVADKANPDMSAMVEGIELT R A L D K A 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 1 2 744.40177 P09372 P09372 105 111 grpE Protein GrpE yes yes 2 0.0052694 60.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11159000 4478700 4968200 0 0 0 1712000 0 0 267 62 284 1550;1551;1552;1553 1108;1109;1110;1111 1110 4 4478700 5085400 0 0 0 1896500 0 0 ALGGGFPVGALLATEECAR YMHYGVTPDLLTTAKALGGGFPVGALLATE GFPVGALLATEECARVMTVGTHGTTYGGNP K A L A R V 4 1 0 0 1 0 2 4 0 0 3 0 0 1 1 0 1 0 0 1 0 0 19 0 2 5 1887.9513 P77581 P77581 253 271 astC Succinylornithine transaminase yes yes 2 2.7751E-06 62.042 By matching By MS/MS By matching By MS/MS 1 1 1 1 108500000 36940000 29950000 0 0 22296000 19310000 0 0 268 437 285 1554;1555;1556;1557 1112;1113 1113 1 36940000 30657000 0 0 26896000 21391000 0 0 ALGIELLR PTGVGKTEVTVQLSKALGIELLRFDMSEYM VTVQLSKALGIELLRFDMSEYMERHTVSRL K A L L R F 1 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 8 0 1 1 883.5491 P0ABH9 P0ABH9 511 518 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 2 0.0029265 72.138 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15145000 4761900 4312700 0 0 0 6070600 0 0 269 201 286 1558;1559;1560;1561 1114;1115;1116;1117 1117 4 4761900 4414400 0 0 0 6724800 0 0 ALGLNDELAHSSIR SACTSASLEPSYVLRALGLNDELAHSSIRF RALGLNDELAHSSIRFSLGRFTTEEEIDYT R A L I R F 2 1 1 1 0 0 1 1 1 1 3 0 0 0 0 2 0 0 0 0 0 0 14 0 1 2 1494.7791 P0A6B7 P0A6B7 341 354 iscS Cysteine desulfurase IscS yes yes 3 0.00018973 45.864 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 24482000 6015800 0 0 0 7301400 11165000 0 0 270 67 287 1562;1563;1564;1565 1118;1119;1120 1119 3 6015800 0 0 0 8807700 12368000 0 0 ALGMELER KLVGEMFVYHMPFNRALGMELERYEKEFAQ YHMPFNRALGMELERYEKEFAQLAFKNQPM R A L E R Y 1 1 0 0 0 0 2 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 8 0 2 1 917.46405 P0ADP2 P0ADP2 27 34 yigI Uncharacterized protein YigI yes yes 2 0.0039111 54.611 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16712000 5635600 0 0 0 4051400 7024600 0 0 271 224 288 1566;1567;1568;1569 1121;1122 1121 2 5635600 0 0 0 4887200 7781700 0 0 ALGSPIR VSQRAGIGINAGRIRALGSPIRGGEAFHTG GINAGRIRALGSPIRGGEAFHTGCIPFYKH R A L I R G 1 1 0 0 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 7 0 0 2 712.42317 P00452;P00452-2 P00452 263 269 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 0.0027534 92.692 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 1 33881000 5882100 10168000 0 0 8574800 8547400 0 707960 272 26 289 1570;1571;1572;1573;1574;1575;1576;1577 1123;1124;1125;1126 1126 4 5882100 10408000 0 0 10344000 9468600 0 4062900 ALHDENVVWHSHP ______________________________ ______________________________ M A L H P V 1 0 1 1 0 0 1 0 3 0 1 0 0 0 1 1 0 1 0 2 0 0 13 0 1 1 1539.7219 P0A6J1 P0A6J1 2 14 cysC Adenylyl-sulfate kinase yes yes 3 0.0071382 37.744 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 11664000 1094000 536370 0 0 4164500 5869400 0 0 273 73 290 1578;1579;1580;1581 1127 1127 1 6604200 3210200 0 0 5928900 8366800 0 0 ALHDENVVWHSHPVTVQQR ______________________________ ENVVWHSHPVTVQQRELHHGHRGVVLWFTG M A L Q R E 1 1 1 1 0 2 1 0 3 0 1 0 0 0 1 1 1 1 0 4 0 0 19 0 1 2 2251.1246 P0A6J1 P0A6J1 2 20 cysC Adenylyl-sulfate kinase yes yes 3;4;5 1.1113E-90 173.63 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 3 414980000 111780000 125950000 0 0 67119000 110130000 0 0 274 73 291 1582;1583;1584;1585;1586;1587;1588;1589;1590;1591;1592 1128;1129;1130;1131;1132;1133;1134;1135;1136 1128 9 111780000 128920000 0 0 80965000 122000000 0 0 ALIDSYRRGEQP YFRPHIDSTERQQLAALIDSYRRGEQPLLA QLAALIDSYRRGEQPLLAPLMRIKHYMALY A A L Q P L 1 2 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 12 2 1 1 1403.7157 P24252 P24252 117 128 ybgA Uncharacterized protein YbgA yes yes 2;3 0.0057456 48.283 By MS/MS By matching By matching By MS/MS 1 1 1 1 43845000 7092800 5593900 0 0 31159000 0 0 0 275 313 292 1593;1594;1595;1596 1137;1138 1137 2 42816000 33479000 0 0 44360000 0 0 0 ALILTPTR LITRQPHAKGRRPVRALILTPTRELAAQIG KGRRPVRALILTPTRELAAQIGENVRDYSK R A L T R E 1 1 0 0 0 0 0 0 0 1 2 0 0 0 1 0 2 0 0 0 0 0 8 0 0 2 883.5491 P25888 P25888 78 85 rhlE ATP-dependent RNA helicase RhlE yes yes 2 0.00036019 104.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 398940000 89259000 92841000 0 0 104420000 112420000 0 0 276 318 293 1597;1598;1599;1600 1139;1140;1141;1142 1141 4 89259000 95032000 0 0 125970000 124530000 0 0 ALIPFGGIK LEKIVGLQTEAPLKRALIPFGGIKMIEGSC EAPLKRALIPFGGIKMIEGSCKAYNRELDP R A L I K M 1 0 0 0 0 0 0 2 0 2 1 1 0 1 1 0 0 0 0 0 0 0 9 0 0 2 914.55894 P09373 P09373 109 117 pflB Formate acetyltransferase 1 yes yes 2 0.012487 49.358 By MS/MS By MS/MS By MS/MS 1 1 1 7026500 2463900 2235200 0 0 2327300 0 0 0 277 63 294 1601;1602;1603 1143 1143 1 2463900 2288000 0 0 2807500 0 0 0 ALKELGEITR YLDIQANLESAEMQKALKELGEITRSMKVL AEMQKALKELGEITRSMKVLGCYPSENVVP K A L T R S 1 1 0 0 0 0 2 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 10 1 2 1 1128.6503 P0A9J8 P0A9J8 358 367 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 2.8224E-29 152.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 1 87552000 38798000 32884000 0 0 9481400 6388600 0 0 278 166 295 1604;1605;1606;1607;1608;1609;1610;1611 1144;1145;1146;1147;1148 1144 5 38798000 33660000 0 0 11437000 7077200 0 0 ALKILNNIRTLRAQARE ______________________________ KILNNIRTLRAQARECTLETLEEMLEKLEV E A L R E C 3 3 2 0 0 1 1 0 0 2 3 1 0 0 0 0 1 0 0 0 0 0 17 4 0 3 1979.1752 P0ACF8 P0ACF8 4 20 hns DNA-binding protein H-NS yes yes 4 0.003639 28.212 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 352810000 1566900 2240100 11846000 14169000 9244700 6047200 16316000 291380000 279 210 296 1612;1613;1614;1615;1616;1617;1618;1619 1149;1150;1151;1152;1153;1154;1155 1151 7 24075000 34162000 100650000 107430000 142330000 91654000 125570000 1672200000 ALKKALE APAALKEGVSKDDAEALKKALEEAGAEVEV GVSKDDAEALKKALEEAGAEVEVK______ E A L L E E 2 0 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 7 2 0 2 771.48544 P0A7K2 P0A7K2 106 112 rplL 50S ribosomal protein L7/L12 yes yes 2 0.015774 71.715 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 19959000 1699300 1536800 2279300 3182800 765560 1014200 4159900 5320700 280 108 297 1620;1621;1622;1623;1624;1625;1626;1627 1156 1156 1 26109000 23436000 19367000 24131000 11786000 15372000 32015000 30535000 ALKKALEE APAALKEGVSKDDAEALKKALEEAGAEVEV VSKDDAEALKKALEEAGAEVEVK_______ E A L E E A 2 0 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 8 2 1 2 900.52803 P0A7K2 P0A7K2 106 113 rplL 50S ribosomal protein L7/L12 yes yes 2 0.019641 81.784 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 125970000 8948300 8355700 13300000 23231000 3388800 2616500 31552000 34576000 281 108 298 1628;1629;1630;1631;1632;1633;1634;1635 1157 1157 1 137490000 127430000 113010000 176130000 52174000 39657000 242830000 198420000 ALLAAFDFPFR DITITTTAKSDEEGRALLAAFDFPFRK___ EEGRALLAAFDFPFRK______________ R A L F R K 3 1 0 1 0 0 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 0 11 0 0 4 1266.6761 P62399 P62399 168 178 rplE 50S ribosomal protein L5 yes yes 2 6.9967E-06 105.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 119710000 29389000 30332000 0 0 40007000 19980000 0 0 282 388 299 1636;1637;1638;1639 1158;1159;1160;1161 1158 4 29389000 31048000 0 0 48261000 22134000 0 0 ALLAAFDFPFRK DITITTTAKSDEEGRALLAAFDFPFRK___ EGRALLAAFDFPFRK_______________ R A L R K - 3 1 0 1 0 0 0 0 0 0 2 1 0 3 1 0 0 0 0 0 0 0 12 1 0 4 1394.7711 P62399 P62399 168 179 rplE 50S ribosomal protein L5 yes yes 2;3 1.0328E-11 111.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 176890000 81897000 14990000 0 0 37217000 42786000 0 0 283 388 300 1640;1641;1642;1643;1644;1645;1646;1647 1162;1163;1164;1165;1166;1167;1168 1165 7 81897000 15344000 0 0 44895000 47398000 0 0 ALLDILADEKENGPEDTTQDDDMK RITSVDTPLGGDSEKALLDILADEKENGPE KENGPEDTTQDDDMKQSIVKWLFELNAKQR K A L M K Q 2 0 1 6 0 1 3 1 0 1 3 2 1 0 1 0 2 0 0 0 0 0 24 1 3 3 2675.212 P13445 P13445 233 256 rpoS RNA polymerase sigma factor RpoS yes yes 3 4.2087E-84 161.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34188000 10306000 9021000 0 0 7139000 7722200 0 0 284 279 301 1648;1649;1650;1651 1169;1170;1171;1172 1169 4 10306000 9233900 0 0 8611800 8554500 0 0 ALLENTELSAR IAIGSGGPYAQAAARALLENTELSAREIAE AAARALLENTELSAREIAEKALDIAGDICI R A L A R E 2 1 1 0 0 0 2 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 11 0 2 2 1215.6459 P0A7B8 P0A7B8 136 146 hslV ATP-dependent protease subunit HslV yes yes 2 1.3956E-51 166.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 140650000 43200000 32568000 0 0 26704000 38182000 0 0 285 100 302 1652;1653;1654;1655 1173;1174;1175;1176 1173 4 43200000 33337000 0 0 32213000 42297000 0 0 ALLFVENR VHRIGRTGRAGRAGRALLFVENRERRLLRN RAGRAGRALLFVENRERRLLRNIERTMKLT R A L N R E 1 1 1 0 0 0 1 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 1 1 960.53927 P0A9P6 P0A9P6 345 352 deaD ATP-dependent RNA helicase DeaD yes yes 2 0.0032493 69.998 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41718000 13212000 11200000 0 0 8867400 8438000 0 0 286 173 303 1656;1657;1658;1659 1177;1178;1179;1180 1180 4 13212000 11465000 0 0 10697000 9347500 0 0 ALLHVAK TLGGVCLNVGCIPSKALLHVAKVIEEAKAL NVGCIPSKALLHVAKVIEEAKALAEHGIVF K A L A K V 2 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 7 0 0 2 750.47521 P0A9P0 P0A9P0 55 61 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.0024971 90.939 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30293000 6655000 8121900 0 0 7448900 8066700 0 0 287 172 304 1660;1661;1662;1663 1181;1182;1183;1184 1181 4 6655000 8313600 0 0 8985600 8936100 0 0 ALLMHGTEGEVYANPQR YIGRVAKFFSDIGGRALLMHGTEGEVYANP LMHGTEGEVYANPQRCPQINLIDREGMRVL R A L Q R C 2 1 1 0 0 1 2 2 1 0 2 0 1 0 1 0 1 0 1 1 0 0 17 0 2 3 1884.9152 P30177 P30177 222 238 ybiB Uncharacterized protein YbiB yes yes 2;3 1.4545E-135 205.3 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 259820000 73398000 58740000 0 0 57444000 70241000 0 0 288 332 305 1664;1665;1666;1667;1668;1669;1670;1671 1185;1186;1187;1188;1189;1190;1191;1192 1186 8 73398000 60126000 0 0 69295000 77811000 0 0 ALLNAGRQTLMLE ______________________________ SEALLNAGRQTLMLELQEASRLPERLGDDF E A L L E L 2 1 1 0 0 1 1 1 0 0 4 0 1 0 0 0 1 0 0 0 0 0 13 1 0 2 1428.7759 P17115 P17115 4 16 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 2 0.0036423 42.743 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9897900 2450800 1459100 1713300 0 0 0 1751600 2523200 289 287 306 1672;1673;1674;1675;1676 1193 1193 237 1 37655000 22251000 14558000 0 0 0 13481000 14480000 ALMEYDESLR GISGQAGAIRHGITRALMEYDESLRSELRK HGITRALMEYDESLRSELRKAGFVTRDARQ R A L L R S 1 1 0 1 0 0 2 0 0 0 2 0 1 0 0 1 0 0 1 0 0 0 10 0 2 1 1225.5649 P0A7X3 P0A7X3 86 95 rpsI 30S ribosomal protein S9 yes yes 2 7.8165E-21 141.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 632300000 172850000 181150000 0 0 125570000 152730000 0 0 290 133 307;308 1677;1678;1679;1680;1681;1682;1683;1684 1194;1195;1196;1197;1198 1195 127 5 172850000 185430000 0 0 151470000 169190000 0 0 ALMGANMQR GASLIPFLEHDDANRALMGANMQRQAVPTL HDDANRALMGANMQRQAVPTLRADKPLVGT R A L Q R Q 2 1 1 0 0 1 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 9 0 0 2 990.47391 P0A8V2 P0A8V2 679 687 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.004622 58.981 By matching By MS/MS By MS/MS 1 1 1 10320000 0 3768900 0 0 3678600 2872100 0 0 291 154 309 1685;1686;1687 1199;1200 1200 2 0 3857800 0 0 4437500 3181700 0 0 ALMVFDIDGHVKR A L K R 1 1 0 2 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 2 0 0 13 1 0 1 1499.7919 REV__P0ADI4 yes yes 3 0.0066506 30.004 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 292 447 310 1688 1201 1201 341 1 0 0 0 0 0 0 0 0 ALNAAGFR VMVKGPGPGRESTIRALNAAGFRITNITDV GRESTIRALNAAGFRITNITDVTPIPHNGC R A L F R I 3 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 8 0 0 3 818.43989 P0A7R9 P0A7R9 99 106 rpsK 30S ribosomal protein S11 yes yes 2 6.5358E-89 189.97 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1348300000 386200000 291400000 0 0 289870000 380860000 0 0 293 121 311 1689;1690;1691;1692;1693 1202;1203;1204;1205 1203 4 386200000 305500000 0 0 349670000 421910000 0 0 ALNARVAALAE AGKPRWDWQPEPVNEALNARVAALAEARLS PVNEALNARVAALAEARLSDAYRITDKQER E A L A E A 5 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 1 0 5 1097.6193 P05055 P05055 241 251 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0027265 57.59 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9763200 3084900 2213400 0 0 2383100 2081800 0 0 294 48 312 1694;1695;1696;1697 1206;1207;1208;1209 1207 4 47398000 33754000 0 0 36691000 31553000 0 0 ALNAYLQR KMLQRIYGTAWADKKALNAYLQRLEEAAKR TAWADKKALNAYLQRLEEAAKRDHRKIGKQ K A L Q R L 2 1 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 8 0 0 2 947.51886 P0A8M3 P0A8M3 228 235 thrS Threonine--tRNA ligase yes yes 2 6.0551E-89 190.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 82474000 20867000 20770000 0 0 20243000 20594000 0 0 295 147 313 1698;1699;1700;1701 1210;1211;1212;1213;1214;1215 1212 6 20867000 21260000 0 0 24419000 22814000 0 0 ALNDLGYEKPSPIQAE ETTFADLGLKAPILEALNDLGYEKPSPIQA LNDLGYEKPSPIQAECIPHLLNGRDVLGMA E A L A E C 2 0 1 1 0 1 2 1 0 1 2 1 0 0 2 1 0 0 1 0 0 0 16 1 1 4 1743.8679 P0A9P6 P0A9P6 20 35 deaD ATP-dependent RNA helicase DeaD yes yes 2 0.0075208 38.634 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 12907000 1570800 1401000 1673200 2724000 0 0 1835700 3702100 296 173 314 1702;1703;1704;1705;1706;1707 1216 1216 1 24134000 21366000 14217000 20652000 0 0 14128000 21246000 ALNHPNIR ADATGREVETTLVSKALNHPNIRVLERSNA ETTLVSKALNHPNIRVLERSNAVDLIVSDK K A L I R V 1 1 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 8 0 0 2 933.51445 P10902 P10902 148 155 nadB L-aspartate oxidase yes yes 2 3.8281E-18 143.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 104050000 29513000 31888000 0 0 19156000 23488000 0 0 297 274 315 1708;1709;1710;1711 1217;1218;1219;1220 1218 4 29513000 32641000 0 0 23108000 26020000 0 0 ALNLQDK ______________________________ ______________________________ M A L D K Q 1 0 1 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 0 1 800.43922 P0A7J3 P0A7J3 2 8 rplJ 50S ribosomal protein L10 yes yes 2 0.00069924 105.39 By MS/MS By MS/MS 1 2 24590000 0 0 0 0 11475000 13115000 0 0 298 106 316 1712;1713;1714 1221;1222 1221 2 0 0 0 0 13843000 14909000 0 0 ALNLQDKQA ______________________________ ______________________________ M A L Q A I 2 0 1 1 0 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 1 0 1 999.53491 P0A7J3 P0A7J3 2 10 rplJ 50S ribosomal protein L10 yes yes 2 6.3586E-07 112.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19410000 1617600 1521600 0 0 10123000 6147700 0 0 299 106 317 1715;1716;1717;1718 1223 1223 1 9764500 9106800 0 0 14412000 8763600 0 0 ALNLQDKQAIVAE ______________________________ ______________________________ M A L A E V 3 0 1 1 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 13 1 0 3 1411.7671 P0A7J3 P0A7J3 2 14 rplJ 50S ribosomal protein L10 yes yes 2 1.003E-24 136.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 141580000 40339000 41946000 0 0 28043000 31254000 0 0 300 106 318 1719;1720;1721;1722 1224;1225;1226;1227 1227 4 619790000 639680000 0 0 431750000 473710000 0 0 ALNNELQQEVHQR ERVEDLFIIATADRRALNNELQQEVHQRLT RRALNNELQQEVHQRLTEALNPNDKG____ R A L Q R L 1 1 2 0 0 3 2 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 13 0 2 1 1577.791 P27249 P27249 867 879 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 2.8525E-119 204.5 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 254000000 12127000 110540000 0 0 62234000 69103000 0 0 301 320 319 1723;1724;1725;1726;1727;1728;1729 1228;1229;1230;1231;1232;1233;1234 1230 7 12127000 113150000 0 0 75073000 76551000 0 0 ALNSQRTSE KNRDRCLVILSRNDEALNSQRTSEELHHYY LSRNDEALNSQRTSEELHHYYEIVWDEEQT E A L S E E 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 9 1 0 1 1004.4887 P0A8E1 P0A8E1 137 145 ycfP UPF0227 protein YcfP yes yes 2 0.00026042 89.142 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26556000 0 0 3324300 5070100 0 0 8041200 10121000 302 143 320 1730;1731;1732;1733 1235;1236;1237 1236 3 0 0 28246000 38439000 0 0 61887000 58081000 ALNSQRTSEE KNRDRCLVILSRNDEALNSQRTSEELHHYY SRNDEALNSQRTSEELHHYYEIVWDEEQTH E A L E E L 1 1 1 0 0 1 2 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 10 1 1 1 1133.5313 P0A8E1 P0A8E1 137 146 ycfP UPF0227 protein YcfP yes yes 2 9.1341E-104 176.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 718850000 35914000 34092000 123160000 116230000 17296000 17611000 169270000 205270000 303 143 321 1734;1735;1736;1737;1738;1739;1740;1741 1238;1239;1240;1241;1242;1243 1238 2 551810000 519910000 1046400000 881240000 266290000 266920000 1302800000 1178000000 ALNTLEMMADMAEVDDSGKR TRRAIAELVNGDARRALNTLEMMADMAEVD EMMADMAEVDDSGKRVLKPELLTEIAGERS R A L K R V 3 1 1 3 0 0 2 1 0 0 2 1 3 0 0 1 1 0 0 1 0 0 20 1 2 3 2195.9861 P0AAZ4 P0AAZ4 211 230 rarA Replication-associated recombination protein A yes yes 3 4.7107E-32 123.55 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 42854000 15522000 11345000 0 0 7209800 8777600 0 0 304 189 322 1742;1743;1744;1745 1244;1245;1246 1244 2 15522000 11612000 0 0 8697300 9723600 0 0 ALNVEEQSVQETEQEER RRRNDDKRQAQQEAKALNVEEQSVQETEQE NVEEQSVQETEQEERVRPVQPRRKQRQLNQ K A L E R V 1 1 1 0 0 3 6 0 0 0 1 0 0 0 0 1 1 0 0 2 0 0 17 0 6 1 2016.9236 P21513 P21513 696 712 rne Ribonuclease E yes yes 2 0.00085301 53.967 By matching By matching By MS/MS By matching 1 1 1 1 20137000 5458200 4387900 0 0 4019900 6270700 0 0 305 297 323 1746;1747;1748;1749 1247 1247 1 5458200 4491500 0 0 4849200 6946500 0 0 ALNVSEEEVTTGLDRFAA VMVLIAGGNVVRFAPALNVSEEEVTTGLDR VSEEEVTTGLDRFAAACEHFVSRGSS____ P A L A A A 3 1 1 1 0 0 3 1 0 0 2 0 0 1 0 1 2 0 0 2 0 0 18 1 3 2 1920.9429 P77581 P77581 378 395 astC Succinylornithine transaminase yes yes 2 2.721E-05 63.76 By MS/MS By MS/MS 1 1 3024100 0 0 0 0 1229100 1795000 0 0 306 437 324 1750;1751 1248 1248 1 0 0 0 0 1749900 2558700 0 0 ALQELGAGK RLTDAGEVWRQYASRALQELGAGKRAIHDV RQYASRALQELGAGKRAIHDVADLTRGSLR R A L G K R 2 0 0 0 0 1 1 2 0 0 2 1 0 0 0 0 0 0 0 0 0 0 9 0 1 2 885.49198 P27111 P27111 71 79 cynR HTH-type transcriptional regulator CynR yes yes 2 4.9819E-05 106.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31967000 9825100 8392600 0 0 6237100 7512300 0 0 307 319 325 1752;1753;1754;1755 1249;1250;1251;1252 1249 4 9825100 8590700 0 0 7523900 8321900 0 0 ALQIGEWQGEPVWLVQQQR LPYGEAANFDLVGQRALQIGEWQGEPVWLV GEWQGEPVWLVQQQRRHDMGSVRQVIDLDV R A L Q R R 1 1 0 0 0 5 2 2 0 1 2 0 0 0 1 0 0 2 0 2 0 0 19 0 2 2 2264.1702 P32664 P32664 43 61 nudC NADH pyrophosphatase yes yes 2;3 1.6248E-30 120.47 By MS/MS By MS/MS By matching 2 2 1 138430000 79634000 0 0 0 47155000 11636000 0 0 308 340 326 1756;1757;1758;1759;1760 1253;1254;1255 1255 3 79634000 0 0 0 56884000 12890000 0 0 ALQLLAR LEHILNEEHIAHEPRALQLLARAAEGSLRD EHIAHEPRALQLLARAAEGSLRDALSLTDQ R A L A R A 2 1 0 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 0 2 783.49667 P06710 P06710 202 208 dnaX DNA polymerase III subunit tau yes yes 2 2.1211E-08 126.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 74329000 23583000 18160000 0 0 13250000 19337000 0 0 309 51 327 1761;1762;1763;1764 1256;1257;1258;1259 1256 4 23583000 18588000 0 0 15983000 21421000 0 0 ALQNNAIEEFKR VVYMHSERFVQDMVKALQNNAIEEFKRYYR MVKALQNNAIEEFKRYYRSVDALLIDDIQF K A L K R Y 2 1 2 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 12 1 2 2 1431.747 P03004 P03004 213 224 dnaA Chromosomal replication initiator protein DnaA yes yes 3 0.002805 43.672 By matching By MS/MS By MS/MS 1 1 1 25630000 8278000 10385000 0 0 0 6967500 0 0 310 40 328 1765;1766;1767 1260;1261;1262 1260 2 8278000 10630000 0 0 0 7718400 0 0 ALQTLVAAK SYNPTTTGHKGQIKRALQTLVAAKKPVVYV KGQIKRALQTLVAAKKPVVYVGGGAITAGC R A L A K K 3 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 9 0 0 3 913.55967 P00893 P00893 199 207 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 1.9837E-06 110.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 156940000 44589000 42764000 0 0 29706000 39883000 0 0 311 29 329 1768;1769;1770;1771 1263;1264;1265;1266 1263 4 44589000 43774000 0 0 35834000 44182000 0 0 ALRAVNPNIRDDE NEADEKLSAELSRLEALRAVNPNIRDDELT LEALRAVNPNIRDDELTAIESNRQQVMESL E A L D E L 2 2 2 2 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 13 2 0 3 1481.7587 P60240 P60240 923 935 rapA RNA polymerase-associated protein RapA yes yes 3 6.8284E-08 62.924 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 312 378 330 1772;1773;1774;1775 1267;1268;1269;1270 1269 4 0 0 0 0 0 0 0 0 ALRLSSVSHPE AHTLAKLATPFAEGEALRLSSVSHPEYIGR AEGEALRLSSVSHPEYIGRVAKFFSDIGGR E A L P E Y 1 1 0 0 0 0 1 0 1 0 2 0 0 0 1 3 0 0 0 1 0 0 11 1 0 2 1194.6357 P30177 P30177 196 206 ybiB Uncharacterized protein YbiB yes yes 3 0.010781 41.54 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 98932000 6466700 3173600 18119000 17046000 3059100 2828600 24038000 24201000 313 332 331 1776;1777;1778;1779;1780;1781;1782;1783;1784 1271;1272;1273 1273 3 67815000 48398000 153960000 129230000 47098000 42872000 185000000 138880000 ALSNPDLYEGDGELR LISNASDAADKLRFRALSNPDLYEGDGELR ALSNPDLYEGDGELRVRVSFDKDKRTLTIS R A L L R V 1 1 1 2 0 0 2 2 0 0 3 0 0 0 1 1 0 0 1 0 0 0 15 0 2 2 1647.774 P0A6Z3 P0A6Z3 50 64 htpG Chaperone protein HtpG yes yes 2 4.4291E-126 199.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 175970000 48211000 42251000 0 0 34094000 51411000 0 0 314 88 332 1785;1786;1787;1788 1274;1275;1276;1277 1274 4 48211000 43248000 0 0 41127000 56952000 0 0 ALSVPCSDSK RGIDKAVTAAVEELKALSVPCSDSKAIAQV VEELKALSVPCSDSKAIAQVGTISANSDET K A L S K A 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 3 0 0 0 1 0 0 10 0 0 2 1062.5016 P0A6F5 P0A6F5 133 142 groL 60 kDa chaperonin yes yes 2 8.9443E-06 107.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 680990000 151320000 163170000 0 0 173520000 192980000 0 0 315 68 333 1789;1790;1791;1792 1278;1279;1280;1281 1281 4 151320000 167020000 0 0 209320000 213780000 0 0 ALTGLSPDEIVNQVK LDEYRSKNGYEGARKALTGLSPDEIVNQVK ALTGLSPDEIVNQVKDAGLKGRGGAGFSTG K A L V K D 1 0 1 1 0 1 1 1 0 1 2 1 0 0 1 1 1 0 0 2 0 0 15 0 1 2 1582.8566 P31979 P31979 41 55 nuoF NADH-quinone oxidoreductase subunit F yes yes 2 5.1288E-07 79.693 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 21045000 5310700 5401800 0 0 5167100 5165500 0 0 316 336 334 1793;1794;1795;1796 1282;1283;1284 1283 3 5310700 5529200 0 0 6233100 5722300 0 0 ALTPFIDR KLADEVDESAKEAEKALTPFIDRVKALLGE SAKEAEKALTPFIDRVKALLGERVKDVRLT K A L D R V 1 1 0 1 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 8 0 0 2 931.51272 P0A6Z3 P0A6Z3 507 514 htpG Chaperone protein HtpG yes yes 2 0.0018551 80.229 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 317 88 335 1797;1798;1799 1285;1286;1287 1285 3 0 0 0 0 0 0 0 0 ALVARGLETPLRPPVHE ______________________________ VARGLETPLRPPVHEMDNETRKSLIAGHMT E A L H E M 2 2 0 0 0 0 2 1 1 0 3 0 0 0 3 0 1 0 0 2 0 0 17 2 1 5 1854.0476 P0A6T5 P0A6T5 14 30 folE GTP cyclohydrolase 1 yes yes 3;4 3.3625E-06 60.474 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 826000000 65898000 59740000 110920000 121130000 69081000 59971000 145270000 193980000 318 81 336 1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815 1288;1289;1290;1291;1292;1293;1294;1295;1296;1297;1298;1299 1289 12 1012500000 911040000 942460000 918370000 1063600000 908950000 1118100000 1113200000 ALVEMHK VLGLPTGGTPMTTYKALVEMHKAGQVSFKH GTPMTTYKALVEMHKAGQVSFKHVVTFNMD K A L H K A 1 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 1 0 0 7 0 1 1 826.43711 P0A759 P0A759 51 57 nagB Glucosamine-6-phosphate deaminase yes yes 2 0.0028379 76.847 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60758000 16544000 15811000 0 0 14242000 14161000 0 0 319 96 337 1816;1817;1818;1819 1300;1301;1302;1303 1300 4 16544000 16184000 0 0 17181000 15687000 0 0 ALYHSKYEE AQYEEIAQRSKEEAEALYHSKYEELQVTVG SKEEAEALYHSKYEELQVTVGRHGDSLKEI E A L E E L 1 0 0 0 0 0 2 0 1 0 1 1 0 0 0 1 0 0 2 0 0 0 9 1 1 1 1138.5295 CON__P35908v2;CON__P35908 CON__P35908v2 369 377 yes no 2;3 0.0060189 92.439 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 2 2 77998000 6957400 6267600 10156000 13323000 2067400 3742400 15483000 20000000 + 320 16 338 1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831 1304;1305;1306;1307 1307 3 106900000 95582000 86295000 101010000 31830000 56722000 119160000 114780000 ALYRIIE GKQKRCFTDIRDGIEALYRIIENAGNRCDG TDIRDGIEALYRIIENAGNRCDGEIINIGN E A L I E N 1 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 7 1 0 1 876.5069 P77398 P77398 546 552 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.0086263 94.407 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 406870000 46508000 49045000 45697000 53320000 33887000 26610000 59841000 91962000 321 432 339 1832;1833;1834;1835;1836;1837;1838;1839 1308;1309 1309 1 714590000 747940000 388280000 404250000 521720000 403310000 460550000 527760000 AMDKVGKEGVITVE ISANSDETVGKLIAEAMDKVGKEGVITVED EAMDKVGKEGVITVEDGTGLQDELDVVEGM E A M V E D 1 0 0 1 0 0 2 2 0 1 0 2 1 0 0 0 1 0 0 3 0 0 14 2 1 1 1474.7701 P0A6F5 P0A6F5 165 178 groL 60 kDa chaperonin yes yes 2 1.1832E-15 99.283 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 72927000 0 0 23907000 16836000 0 877070 11877000 19430000 322 68 340;341 1840;1841;1842;1843;1844;1845;1846;1847;1848 1310;1311 1311 74 2 0 0 203140000 127640000 0 13293000 91411000 111500000 AMDKVGKEGVITVEDGTGLQDE ISANSDETVGKLIAEAMDKVGKEGVITVED EGVITVEDGTGLQDELDVVEGMQFDRGYLS E A M D E L 1 0 0 3 0 1 3 4 0 1 1 2 1 0 0 0 2 0 0 3 0 0 22 2 2 1 2290.0999 P0A6F5 P0A6F5 165 186 groL 60 kDa chaperonin yes yes 2;3 2.3343E-192 248.06 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 4 4 3 4 3 3184900000 3257200 0 581670000 1088900000 124210000 100530000 993390000 292950000 323 68 342;343 1849;1850;1851;1852;1853;1854;1855;1856;1857;1858;1859;1860;1861;1862;1863;1864;1865;1866;1867;1868;1869;1870 1312;1313;1314;1315;1316;1317;1318;1319;1320;1321;1322;1323;1324;1325;1326;1327;1328;1329 1319 74 18 50047000 0 4942400000 8255500000 1912400000 1523700000 7645300000 1681200000 AMEAPLR GQNEDQNVGIKVALRAMEAPLRQIVLNCGE VGIKVALRAMEAPLRQIVLNCGEEPSVVAN R A M L R Q 2 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 7 0 1 3 786.40581 P0A6F5 P0A6F5 446 452 groL 60 kDa chaperonin yes yes 2 3.562E-11 129.96 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 1232600000 282420000 254320000 0 0 339640000 356270000 0 0 324 68 344;345 1871;1872;1873;1874;1875;1876;1877 1330;1331;1332;1333;1334;1335;1336 1331 75 7 282420000 260320000 0 0 409710000 394660000 0 0 AMLAAEQHVVTPALER LAELCYNTLLEEGEKAMLAAEQHVVTPALE MLAAEQHVVTPALERVIEANTYLSGVGFES K A M E R V 4 1 0 0 0 1 2 0 1 0 2 0 1 0 1 0 1 0 0 2 0 0 16 0 2 5 1734.9087 P0A9S5 P0A9S5 217 232 gldA Glycerol dehydrogenase yes yes 3 0.00010391 61.641 By MS/MS By MS/MS By MS/MS 2 1 1 18410000 7856500 0 0 0 1472800 9080700 0 0 325 176 346 1878;1879;1880;1881 1337;1338 1337 2 51369000 0 0 0 22675000 10059000 0 0 AMLEVLYATGLR LQAPLIDQPLELRDKAMLEVLYATGLRVSE RDKAMLEVLYATGLRVSELVGLTMSDISLR K A M L R V 2 1 0 0 0 0 1 1 0 0 3 0 1 0 0 0 1 0 1 1 0 0 12 0 1 2 1335.7221 P0A8P8 P0A8P8 137 148 xerD Tyrosine recombinase XerD yes yes 2 2.6973E-45 182.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 274320000 52458000 51714000 0 0 76593000 93552000 0 0 326 151 347;348 1882;1883;1884;1885;1886;1887 1339;1340;1341;1342;1343;1344 1344 148 6 52458000 52935000 0 0 92394000 103630000 0 0 AMLEVMYGAGLR LLDIDINDPLAVRDRAMLEVMYGAGLRLSE RDRAMLEVMYGAGLRLSELVGLDIKHLDLE R A M L R L 2 1 0 0 0 0 1 2 0 0 2 0 2 0 0 0 0 0 1 1 0 0 12 0 1 2 1309.6523 P0A8P6 P0A8P6 137 148 xerC Tyrosine recombinase XerC yes yes 2 1.2605E-07 104.17 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 25360000 6189300 3996700 0 0 7472400 7702100 0 0 327 150 349 1888;1889;1890;1891 1345;1346;1347 1347 3 6189300 4091000 0 0 9013900 8532300 0 0 AMMDNLQTETVINR KVIDIWAAANDRVSKAMMDNLQTETVINRD KAMMDNLQTETVINRDGQEEKQVSFNSIYM K A M N R D 1 1 2 1 0 1 1 0 0 1 1 0 2 0 0 0 2 0 0 1 0 0 14 0 1 1 1634.7756 P0A8T7 P0A8T7 696 709 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.302E-13 112.13 By matching By matching By MS/MS By MS/MS 1 1 2 1 28128000 6533400 5717500 0 0 8123100 7754100 0 0 328 153 350 1892;1893;1894;1895;1896 1348;1349 1349 2 6533400 5852500 0 0 10080000 8589800 0 0 AMPGVMRIPE PIFVEEEIDDYKAVEAMPGVMRIPEKHLAR YKAVEAMPGVMRIPEKHLAREIERIANAGI E A M P E K 1 1 0 0 0 0 1 1 0 1 0 0 2 0 2 0 0 0 0 1 0 0 10 1 0 3 1099.5518 P0ACB2 P0ACB2 49 58 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.0048644 40.002 By MS/MS By MS/MS By MS/MS 1 1 1 23536000 0 0 0 4677900 0 0 6843700 12014000 329 207 351 1897;1898;1899 1350;1351 1351 183;184 2 0 0 0 35466000 0 0 52671000 68947000 AMQEVLQQFAHVK VAIVRIEQLYPFPHKAMQEVLQQFAHVKDF HKAMQEVLQQFAHVKDFVWCQEEPLNQGAW K A M V K D 2 0 0 0 0 3 1 0 1 0 1 1 1 1 0 0 0 0 0 2 0 0 13 0 1 2 1527.7868 P0AFG3 P0AFG3 855 867 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 6.0951E-71 179.8 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 421660000 107200000 140310000 0 0 89527000 84628000 0 0 330 246 352;353 1900;1901;1902;1903;1904;1905;1906;1907;1908;1909;1910;1911 1352;1353;1354;1355;1356;1357;1358;1359;1360;1361;1362;1363;1364 1357 218 13 107200000 143620000 0 0 108000000 93748000 0 0 AMQYDLSTTGGNSGSPVFNE TMWESKGKITYLKGEAMQYDLSTTGGNSGS LSTTGGNSGSPVFNEKNEVIGIHWGGVPNE E A M N E K 1 0 2 1 0 1 1 3 0 0 1 0 1 1 1 3 2 0 1 1 0 0 20 0 0 2 2073.8949 CON__P0C1U8 CON__P0C1U8 225 244 yes yes 2 3.1989E-47 138.02 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 1162700000 145270000 143520000 87518000 97679000 83261000 119760000 229770000 255920000 + 331 11 354;355 1912;1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923;1924;1925;1926;1927 1365;1366;1367;1368;1369;1370;1371;1372;1373;1374;1375;1376;1377;1378 1369 9 14 2232000000 2188800000 743630000 740560000 1281900000 1815100000 1768400000 1468700000 AMQYDLSTTGGNSGSPVFNEKNE TMWESKGKITYLKGEAMQYDLSTTGGNSGS TGGNSGSPVFNEKNEVIGIHWGGVPNEFNG E A M N E V 1 0 3 1 0 1 2 3 0 0 1 1 1 1 1 3 2 0 1 1 0 0 23 1 1 2 2445.0754 CON__P0C1U8 CON__P0C1U8 225 247 yes yes 2;3 0 318.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 4 5 2 2 3 5 4129500000 113190000 160200000 833640000 931330000 84643000 92230000 586550000 1327800000 + 332 11 356;357 1928;1929;1930;1931;1932;1933;1934;1935;1936;1937;1938;1939;1940;1941;1942;1943;1944;1945;1946;1947;1948;1949;1950;1951;1952 1379;1380;1381;1382;1383;1384;1385;1386;1387;1388;1389;1390;1391;1392;1393;1394;1395;1396;1397;1398 1386 9 20 1739100000 2443000000 7083300000 7060900000 1303200000 1397900000 4514200000 7619900000 AMRGEIP FLRKFGLSRIKVREAAMRGEIPGLKKASW_ SRIKVREAAMRGEIPGLKKASW________ A A M I P G 1 1 0 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 7 1 1 1 772.39016 P0AG59 P0AG59 88 94 rpsN 30S ribosomal protein S14 yes yes 2 0.011229 107.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87998000 4366900 4954700 0 0 52291000 26385000 0 0 333 260 358 1953;1954;1955;1956 1399;1400 1400 0 26361000 29654000 0 0 74446000 37611000 0 0 AMTRSIE IAQTKAADMTGADIEAMTRSIEGTARSMGL DMTGADIEAMTRSIEGTARSMGLVVED___ E A M I E G 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 7 1 0 1 806.39564 P0A7J7 P0A7J7 124 130 rplK 50S ribosomal protein L11 yes yes 2 0.013826 91.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 97359000 8126300 9232800 15672000 18665000 8750700 12380000 8893000 15638000 334 107 359 1957;1958;1959;1960;1961;1962;1963;1964 1401;1402;1403 1402 3 124860000 140800000 133170000 141510000 134730000 187640000 68443000 89742000 AMTVGGTTLQSQSRAIDAKE RWLVGGGALTTPVNEAMTVGGTTLQSQSRA GTTLQSQSRAIDAKEILMKRKITAAPVVDE E A M K E I 3 1 0 1 0 2 1 2 0 1 1 1 1 0 0 2 3 0 0 1 0 0 20 2 0 3 2063.0317 P17115 P17115 268 287 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 3 1.2384E-40 124.63 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 1 149850000 17156000 13839000 23687000 34323000 10762000 8640900 24186000 17251000 335 287 360;361 1965;1966;1967;1968;1969;1970;1971;1972;1973;1974;1975;1976;1977;1978;1979 1404;1405;1406;1407;1408;1409;1410;1411;1412;1413;1414;1415;1416 1411 238 13 263600000 211040000 201260000 260230000 165690000 130970000 186140000 99003000 AMVAGTLANFQHPTLK ______________________________ MVAGTLANFQHPTLKHNLTTLKALHHVAWM R A M L K H 3 0 1 0 0 1 0 1 1 0 2 1 1 1 1 0 2 0 0 1 0 0 16 0 0 4 1697.8923 P0AF08 P0AF08 15 30 mrp Protein mrp yes yes 3 1.5777E-05 69.594 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 50705000 8607400 12230000 0 0 13683000 16185000 0 0 336 241 362 1980;1981;1982;1983;1984;1985;1986 1417;1418 1417 2 8607400 67667000 0 0 112380000 142770000 0 0 ANAEADRKFEE GLNEDEIQKMVRDAEANAEADRKFEELVQT RDAEANAEADRKFEELVQTRNQGDHLLHST E A N E E L 3 1 1 1 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 11 2 2 3 1278.584 P0A6Y8 P0A6Y8 521 531 dnaK Chaperone protein DnaK yes yes 3 0.0087573 34.755 By MS/MS 1 0 0 0 0 0 0 0 0 0 337 86 363 1987 1419 1419 1 0 0 0 0 0 0 0 0 ANATAWLK GAWYSYKGEKIGQGKANATAWLKDNPETAK EKIGQGKANATAWLKDNPETAKEIEKKVRE K A N L K D 3 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 8 0 0 3 873.47085 P0A7G6 P0A7G6 304 311 recA Protein RecA yes yes 2 0.0039751 54.157 By MS/MS 1 0 0 0 0 0 0 0 0 0 338 104 364 1988 1420 1420 1 0 0 0 0 0 0 0 0 ANDAAGDGTTTATVLAQAIITEGLK FENMGAQMVKEVASKANDAAGDGTTTATVL TATVLAQAIITEGLKAVAAGMNPMDLKRGI K A N L K A 6 0 1 2 0 1 1 3 0 2 2 1 0 0 0 0 5 0 0 1 0 0 25 0 1 6 2401.2336 P0A6F5 P0A6F5 81 105 groL 60 kDa chaperonin yes yes 3 3.501E-96 164.31 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 647330000 58453000 139500000 0 0 286420000 162960000 0 0 339 68 365 1989;1990;1991;1992;1993;1994 1421;1422;1423;1424;1425;1426 1426 6 65502000 142790000 0 0 345640000 180520000 0 0 ANEAYLQGQLGNPK DTQWATWEGVLNYYKANEAYLQGQLGNPKG KANEAYLQGQLGNPKGEDQPNKKYYDPRVW K A N P K G 2 0 2 0 0 2 1 2 0 0 2 1 0 0 1 0 0 0 1 0 0 0 14 0 1 3 1501.7525 P0AB71 P0AB71 306 319 fbaA Fructose-bisphosphate aldolase class 2 yes yes 2 4.259E-63 169.65 By MS/MS By MS/MS By MS/MS 1 1 1 28510000 0 7611400 0 0 9981800 10917000 0 0 340 190 366 1995;1996;1997 1427;1428;1429 1429 3 0 7791000 0 0 12041000 12094000 0 0 ANFDLVGQRA QKLWLPKGELPYGEAANFDLVGQRALQIGE PYGEAANFDLVGQRALQIGEWQGEPVWLVQ A A N R A L 2 1 1 1 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 10 1 0 1 1089.5567 P32664 P32664 34 43 nudC NADH pyrophosphatase yes yes 2 0.0039597 57.96 By MS/MS By MS/MS By MS/MS 1 1 1 4633000 605490 0 0 0 0 4027500 0 0 341 340 367 1998;1999;2000 1430;1431 1431 2 3655100 0 0 0 0 5741200 0 0 ANGQAVPKEKDE NMELAKIKQKCPLYEANGQAVPKEKDEMVE LYEANGQAVPKEKDEMVEQEFNRLLEATSY E A N D E M 2 0 1 1 0 1 2 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 12 2 1 3 1284.631 LSD1-FL-His LSD1-FL-His 367 378 yes yes 2;3 3.428E-81 218.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 2 2 2 3 2 2 13329000000 865700000 1107300000 2099000000 2572900000 469830000 591560000 2206900000 3416200000 342 24 368 2001;2002;2003;2004;2005;2006;2007;2008;2009;2010;2011;2012;2013;2014;2015;2016;2017;2018;2019;2020 1432;1433;1434;1435;1436;1437;1438;1439;1440;1441;1442;1443;1444;1445 1435 11 13298000000 16885000000 17835000000 19507000000 7233400000 8966000000 16985000000 19605000000 ANIKSAKKRAIQSE ______________________________ MANIKSAKKRAIQSEKARKHNASRRSMMRT M A N S E K 3 1 1 0 0 1 1 0 0 2 0 3 0 0 0 2 0 0 0 0 0 0 14 4 0 3 1542.8842 P0A7U7 P0A7U7 2 15 rpsT 30S ribosomal protein S20 yes yes 3 0.0039737 38.799 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 75468000 5161200 3926200 8789600 14141000 3231100 2972900 15191000 22054000 343 127 369 2021;2022;2023;2024;2025;2026;2027;2028 1446 1446 1 79300000 59875000 74684000 107210000 49746000 45059000 116920000 126570000 ANISVHEPR LAREPHRYSGRTAMRANISVHEPRQPQDID GRTAMRANISVHEPRQPQDIDTMFTFSMEG R A N P R Q 1 1 1 0 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 9 0 1 2 1021.5305 P33602 P33602 717 725 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 6.2191E-109 200.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 211960000 49524000 59475000 0 0 53646000 49319000 0 0 344 345 370 2029;2030;2031;2032 1447;1448;1449;1450 1447 4 49524000 60879000 0 0 64713000 54634000 0 0 ANLTAQINK AAKGLIHKNKAARHKANLTAQINKLA____ KAARHKANLTAQINKLA_____________ K A N N K L 2 0 2 0 0 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 0 0 2 971.53999 P0A7U7 P0A7U7 77 85 rpsT 30S ribosomal protein S20 yes yes 2 6.2452E-75 183.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 183320000 41333000 39202000 0 0 54200000 48586000 0 0 345 127 371 2033;2034;2035;2036;2037;2038;2039 1451;1452;1453;1454 1452 4 41333000 43264000 0 0 66416000 54315000 0 0 ANPLYQK ______________________________ ______________________________ M A N Q K H 1 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 7 0 0 2 832.4443 P0A786 P0A786 2 8 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.0047117 63.642 By matching By matching By MS/MS By MS/MS 1 1 1 1 17982000 3953900 4765400 0 0 4685700 4576900 0 0 346 97 372 2040;2041;2042;2043 1455;1456 1455 2 3953900 4877900 0 0 5652400 5070100 0 0 ANPPSDVYLSSRDRQILDWHFANLE AETQGKLEEKLQELEANPPSDVYLSSRDRQ SRDRQILDWHFANLEFANATPLSTLSLKHW E A N L E F 2 2 2 3 0 1 1 0 1 1 3 0 0 1 2 3 0 1 1 1 0 0 25 2 0 4 2942.4311 LSD1-FL-His LSD1-FL-His 515 539 yes yes 3;4 4.4062E-54 121.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1221900000 2400600 2818800 0 0 597270000 619400000 0 0 347 24 373 2044;2045;2046;2047;2048;2049;2050;2051 1457;1458;1459;1460;1461 1460 5 36885000 42987000 0 0 9195600000 9388000000 0 0 ANPQPELLK RDDLNLVLATAAKLKANPQPELLKHKVIAS TAAKLKANPQPELLKHKVIASCFFEASTRT K A N L K H 1 0 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 9 0 1 3 1008.5604 P0A786 P0A786 33 41 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.010624 50.607 By MS/MS By MS/MS By MS/MS 1 1 2 19706000 4375600 0 0 0 5831300 9499400 0 0 348 97 374 2052;2053;2054;2055 1462;1463 1463 2 4375600 0 0 0 7034300 10773000 0 0 ANPWQQFAETHNK DEERRRISLGLKQCKANPWQQFAETHNKGD CKANPWQQFAETHNKGDRVEGKIKSITDFG K A N N K G 2 0 2 0 0 2 1 0 1 0 0 1 0 1 1 0 1 1 0 0 0 0 13 0 1 3 1569.7324 P0AG67 P0AG67 351 363 rpsA 30S ribosomal protein S1 yes yes 3 4.1517E-05 70.622 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39253000 11548000 10822000 0 0 10869000 6014100 0 0 349 261 375 2056;2057;2058;2059 1464;1465;1466;1467;1468;1469 1464 6 11548000 11077000 0 0 13112000 6662300 0 0 ANSYVIGDR VKLVERYLAEQAMDRANSYVIGDRATDIQL EQAMDRANSYVIGDRATDIQLAENMGITGL R A N D R A 1 1 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 0 0 1 993.48796 P06987 P06987 123 131 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 2.3777E-19 138.4 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 744270000 206320000 232150000 0 0 144040000 161750000 0 0 350 55 376 2060;2061;2062;2063 1470 1470 1 206320000 237630000 0 0 173760000 179180000 0 0 ANTQQIMDYYDSSLE NGQLARAAKIWPQLEANTQQIMDYYDSSLE ANTQQIMDYYDSSLETAIDHDNYLEFQQVL E A N L E T 1 0 1 2 0 2 1 0 0 1 1 0 1 0 0 2 1 0 2 0 0 0 15 0 0 1 1776.7512 P0AFX4 P0AFX4 98 112 rsd Regulator of sigma D yes yes 2 0.0028517 62.466 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 45372000 5062100 5806700 4115700 4356100 6683200 11333000 3070100 4944700 351 251 377 2064;2065;2066;2067;2068;2069;2070;2071 1471;1472;1473;1474;1475 1471 5 77777000 88553000 34971000 33026000 102890000 171770000 23628000 28377000 ANVGKPQVAYRE LDIIVDRMKREFNVEANVGKPQVAYRETIR NVEANVGKPQVAYRETIRQKVTDVEGKHAK E A N R E T 2 1 1 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 1 2 0 0 12 2 0 3 1330.6993 P0A6M8 P0A6M8 481 492 fusA Elongation factor G yes yes 3 0.019735 26.541 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 63867000 2123400 2274800 16178000 11854000 2165500 2167300 11870000 15235000 352 76 378 2072;2073;2074;2075;2076;2077;2078;2079 1476 1476 1 32626000 34690000 137460000 89871000 33341000 32848000 91351000 87429000 ANVSQVMHIIGDVAGR LNDTDMAIIDKRRPRANVSQVMHIIGDVAG NVSQVMHIIGDVAGRDCVLVDDMIDTGGTL R A N G R D 2 1 1 1 0 1 0 2 1 2 0 0 1 0 0 1 0 0 0 3 0 0 16 0 0 2 1665.8621 P0A717 P0A717 199 214 prs Ribose-phosphate pyrophosphokinase yes yes 2;3 8.0389E-176 216.46 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 332060000 85366000 73264000 0 0 90151000 83281000 0 0 353 91 379 2080;2081;2082;2083;2084;2085;2086;2087 1477;1478;1479;1480;1481;1482;1483;1484 1480 8 85366000 74993000 0 0 108750000 92257000 0 0 APEAVIAK SRIENKLANEGFVARAPEAVIAKEREKLEG NEGFVARAPEAVIAKEREKLEGYAEAKAKL R A P A K E 3 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 8 0 1 4 797.4647 P07118 P07118 919 926 valS Valine--tRNA ligase yes yes 2 0.0042393 64.567 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9774000 2269500 3030800 0 0 2292800 2180900 0 0 354 57 380 2088;2089;2090;2091 1485 1485 1 2269500 3102300 0 0 2765800 2415900 0 0 APECIEFANK GVLCELTNDDGTMARAPECIEFANKHNMAL GTMARAPECIEFANKHNMALVTIEDLVAYR R A P N K H 2 0 1 0 1 0 2 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 10 0 2 3 1177.5438 P0A7J0 P0A7J0 185 194 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 2.6961E-130 215.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 130850000 34329000 25239000 0 0 34335000 36952000 0 0 355 105 381 2092;2093;2094;2095;2096 1486;1487;1488 1486 3 54559000 25835000 0 0 41419000 40934000 0 0 APEFTPSQTEEGDLHYGHGEAGTHAPGMSQR FAPAARPKMKITGIKAPEFTPSQTEEGDLH GHGEAGTHAPGMSQRRMLEVEIDVLDKNNR K A P Q R R 3 1 0 1 0 2 4 5 3 0 1 0 1 1 3 2 3 0 1 0 0 0 31 0 4 6 3293.4432 P0AAN3 P0AAN3 45 75 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 4;5 1.6331E-98 162.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 243610000 60478000 71592000 0 0 46849000 64695000 0 0 356 187 382 2097;2098;2099;2100;2101;2102;2103;2104 1489;1490;1491;1492;1493;1494;1495;1496 1491 8 60478000 73282000 0 0 56515000 71668000 0 0 APETLQK GAQYPAEHNVGHLYKAPETLQKFYRENDPT HNVGHLYKAPETLQKFYRENDPTNSMNPGI K A P Q K F 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 7 0 1 2 785.42832 P06149 P06149 537 543 dld D-lactate dehydrogenase yes yes 2 0.0033763 60.358 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 357 50 383 2105;2106 1497;1498 1498 2 0 0 0 0 0 0 0 0 APGDETPEK RDRKWEDSPWRTVSRAPGDETPEKADHGGI WRTVSRAPGDETPEKADHGGISGKSFIDPE R A P E K A 1 0 0 1 0 0 2 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 9 0 2 3 942.42944 P0AGJ5 P0AGJ5 75 83 yfiF Uncharacterized tRNA/rRNA methyltransferase YfiF yes yes 2 0.021011 43.808 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5314300 1845200 1882700 0 0 975450 611000 0 0 358 265 384 2107;2108;2109;2110 1499 1499 1 1845200 1927100 0 0 1176700 676850 0 0 APGFGDR VVNTMRGIVKVAAVKAPGFGDRRKAMLQDI IVKVAAVKAPGFGDRRKAMLQDIATLTGGT K A P D R R 1 1 0 1 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 7 0 0 2 718.33984 P0A6F5 P0A6F5 278 284 groL 60 kDa chaperonin yes yes 2 3.4598E-05 115.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 936420000 194450000 287650000 0 0 209410000 244910000 0 0 359 68 385 2111;2112;2113;2114 1500;1501;1502;1503 1501 4 194450000 294440000 0 0 252620000 271300000 0 0 APGFGDRR VVNTMRGIVKVAAVKAPGFGDRRKAMLQDI VKVAAVKAPGFGDRRKAMLQDIATLTGGTV K A P R R K 1 2 0 1 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 8 1 0 2 874.44095 P0A6F5 P0A6F5 278 285 groL 60 kDa chaperonin yes yes 2 3.7424E-25 147.69 By MS/MS By MS/MS By matching 1 1 1 41731000 19279000 19731000 0 0 2721000 0 0 0 360 68 386 2115;2116;2117 1504;1505;1506 1506 3 19279000 20196000 0 0 3282300 0 0 0 APLVMVVDHQR HRHASAIRVNAALAKAPLVMVVDHQRTAIM ALAKAPLVMVVDHQRTAIMENAHLVLSAAS K A P Q R T 1 1 0 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 3 0 0 11 0 0 2 1263.6758 P33602 P33602 587 597 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 3.1992E-95 231.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 4 4 553380000 124620000 143860000 0 0 135520000 149380000 0 0 361 345 387;388 2118;2119;2120;2121;2122;2123;2124;2125;2126;2127;2128;2129;2130;2131;2132 1507;1508;1509;1510;1511;1512;1513;1514;1515;1516;1517;1518;1519;1520;1521 1516 275 15 124620000 147260000 0 0 163470000 165480000 0 0 APNIESIISHQPLEYNR PPGRANRSGWYLYNRAPNIESIISHQPLEY NIESIISHQPLEYNRYLNKLVAWAWFNGLL R A P N R Y 1 1 2 0 0 1 2 0 1 3 1 0 0 0 2 2 0 0 1 0 0 0 17 0 2 3 1980.0065 P00936 P00936 470 486 cyaA Adenylate cyclase yes yes 3 0.00033182 51.727 By MS/MS By MS/MS By MS/MS 1 1 1 24211000 7251100 7849200 0 0 0 9111000 0 0 362 31 389 2133;2134;2135 1522;1523;1524 1522 3 7251100 8034500 0 0 0 10093000 0 0 APQILVLAPTR AFSLPLLQNLDPELKAPQILVLAPTRELAV PELKAPQILVLAPTRELAVQVAEAMTDFSK K A P T R E 2 1 0 0 0 1 0 0 0 1 2 0 0 0 2 0 1 0 0 1 0 0 11 0 0 4 1177.7183 P0A9P6 P0A9P6 74 84 deaD ATP-dependent RNA helicase DeaD yes yes 2 0.00010631 88.681 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31321000 6519700 6033600 0 0 10091000 8676400 0 0 363 173 390 2136;2137;2138;2139 1525;1526;1527;1528 1527 4 6519700 6176000 0 0 12173000 9611500 0 0 APSIMQVPGAR VHDLAYADIVYDGWKAPSIMQVPGARDVAV DGWKAPSIMQVPGARDVAVEFFTLSKSYNM K A P A R D 2 1 0 0 0 1 0 1 0 1 0 0 1 0 2 1 0 0 0 1 0 0 11 0 0 4 1125.5965 P77434 P77434 223 233 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 1.9393E-51 163.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 100420000 26388000 27797000 0 0 23924000 22313000 0 0 364 433 391;392 2140;2141;2142;2143;2144 1529;1530;1531;1532;1533 1529 334 5 26388000 28453000 0 0 28859000 24718000 0 0 APSTYGGGLSVSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSRF RAPSTYGGGLSVSSRFSSGGACGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 4 1 0 1 1 0 0 14 0 0 2 1337.6575 CON__P08779 CON__P08779 42 55 yes yes 2 0.00099625 61.353 By matching By MS/MS 1 1 8995400 0 4070400 0 0 0 4925100 0 0 + 365 10 393 2145;2146 1534 1534 1 0 4166500 0 0 0 5455900 0 0 APSTYGGGLSVSSSR GSSRISSVLAGGSCRAPSTYGGGLSVSSSR APSTYGGGLSVSSSRFSSGGAYGLGGGYGG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 5 1 0 1 1 0 0 15 0 0 2 1424.6896 CON__P02533 CON__P02533 42 56 yes yes 2 2.2896E-63 167.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60483000 9369900 8683200 0 0 20147000 22283000 0 0 + 366 4 394 2147;2148;2149;2150 1535;1536;1537;1538 1538 4 9369900 8888200 0 0 24303000 24685000 0 0 APTPVDVIEGDIR PAMIERCRRHIDAYKAPTPVDVIEGDIRDI YKAPTPVDVIEGDIRDIAIENASMVVLNFT K A P I R D 1 1 0 2 0 0 1 1 0 2 0 0 0 0 2 0 1 0 0 2 0 0 13 0 1 3 1380.7249 P76290 P76290 107 119 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2 2.1701E-07 91.855 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39962000 13115000 8541500 0 0 9022600 9283100 0 0 367 421 395 2151;2152;2153;2154 1539;1540;1541;1542 1540 4 13115000 8743100 0 0 10884000 10284000 0 0 APVEDQAR VDDTRLDDIAAWTYRAPVEDQARLGFAIAH IAAWTYRAPVEDQARLGFAIAHALDNSAPA R A P A R L 2 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 8 0 1 3 884.43519 P33602 P33602 449 456 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.016764 55.676 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 97632000 29596000 45144000 0 0 12610000 10281000 0 0 368 345 396 2155;2156;2157;2158 1543;1544;1545 1543 2 29596000 46209000 0 0 15211000 11389000 0 0 APVFQSR APYYHLFGSDELSQRAPVFQSRMPQPYIKL GSDELSQRAPVFQSRMPQPYIKLNPADAAK R A P S R M 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 7 0 0 2 803.42899 P33602 P33602 828 834 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 1.0859E-17 143.02 By MS/MS By matching By MS/MS By matching 1 1 1 1 220910000 49118000 59761000 0 0 53994000 58038000 0 0 369 345 397 2159;2160;2161;2162 1546;1547 1546 2 49118000 61172000 0 0 65134000 64293000 0 0 APVVTIMGHVDHGK AVMSDRDTGAAAEPRAPVVTIMGHVDHGKT RAPVVTIMGHVDHGKTSLLDYIRSTKVASG R A P G K T 1 0 0 1 0 0 0 2 2 1 0 1 1 0 1 0 1 0 0 3 0 0 14 0 0 2 1459.7606 P0A705;P0A705-3;P0A705-2 P0A705 391 404 infB Translation initiation factor IF-2 yes no 3 7.1449E-12 101.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 102980000 21629000 31295000 0 0 23969000 26083000 0 0 370 90 398 2163;2164;2165;2166 1548;1549;1550;1551;1552 1552 5 21629000 32034000 0 0 28914000 28894000 0 0 APVVVPAGVDVK ______________________________ VAKAPVVVPAGVDVKINGQVITIKGKNGEL K A P V K I 2 0 0 1 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 5 0 0 12 0 0 4 1149.6758 P0AG55 P0AG55 7 18 rplF 50S ribosomal protein L6 yes yes 2 6.2991E-05 73.985 By MS/MS By MS/MS 1 2 14265000 0 0 0 0 6680300 7584300 0 0 371 259 399 2167;2168;2169 1553;1554 1553 2 0 0 0 0 8058400 8843400 0 0 APYNSDTVLVHRVHSYLE PKIQLTFEATLQQLEAPYNSDTVLVHRVHS NSDTVLVHRVHSYLERHGLINFGIYKRIKP E A P L E R 1 1 1 1 0 0 1 0 2 0 2 0 0 0 1 2 1 0 2 3 0 0 18 1 0 2 2099.0436 LSD1-FL-His LSD1-FL-His 242 259 yes yes 3;4 6.2425E-25 103.5 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 137360000 19435000 10560000 0 0 70507000 36860000 0 0 372 24 400 2170;2171;2172;2173;2174;2175;2176 1555;1556;1557;1558;1559 1557 5 298610000 161040000 0 0 1085500000 558670000 0 0 AQAAANIAQLTVNR TYQATYDSAKGDLAKAQAAANIAQLTVNRY KAQAAANIAQLTVNRYQKLLGTQYISKQEY K A Q N R Y 5 1 2 0 0 2 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 14 0 0 5 1439.7845 P0AE06 P0AE06 115 128 acrA Multidrug efflux pump subunit AcrA yes yes 2 1.0238E-23 134.13 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35585000 9591100 6991000 0 0 6966400 12037000 0 0 373 232 401 2177;2178;2179;2180 1560;1561;1562;1563 1563 4 9591100 7156000 0 0 8403600 13334000 0 0 AQAGGVLTR KPSDLNRPGHVFPLRAQAGGVLTRGGHTEA HVFPLRAQAGGVLTRGGHTEATIDLMTLAG R A Q T R G 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 0 2 871.48756 P0A7J0 P0A7J0 142 150 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 5.0712E-14 133.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 400230000 104760000 106950000 0 0 100300000 88216000 0 0 374 105 402 2181;2182;2183;2184;2185;2186 1564;1565;1566;1567 1565 4 134610000 124730000 0 0 120990000 97724000 0 0 AQAIKNTDIAEE SSLVTEWVKGKSLDEAQAIKNTDIAEELEL LDEAQAIKNTDIAEELELPPVKIHCSILAE E A Q E E L 3 0 1 1 0 1 2 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 12 1 1 3 1301.6463 P0ACD4 P0ACD4 85 96 iscU Iron-sulfur cluster assembly scaffold protein IscU yes yes 2 3.8774E-07 77.192 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52182000 0 0 11457000 12616000 0 0 15581000 12527000 375 209 403 2187;2188;2189;2190 1568;1569;1570 1570 3 0 0 97352000 95652000 0 0 119920000 71892000 AQDIARSILE NVYQCGTYQMHSLQEAQDIARSILERDVRI HSLQEAQDIARSILERDVRINSNEELALPK E A Q L E R 2 1 0 1 0 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 10 1 0 2 1114.5982 P45578 P45578 139 148 luxS S-ribosylhomocysteine lyase yes yes 2 6.78E-05 82.287 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 123980000 0 9183100 19417000 21216000 5663800 6909800 26882000 34705000 376 370 404 2191;2192;2193;2194;2195;2196;2197 1571;1572;1573;1574;1575;1576;1577 1572 7 0 140040000 164990000 160850000 87200000 104730000 206890000 199170000 AQEEDLPADALR NRRKGEMVLIVEGHKAQEEDLPADALRTLA GHKAQEEDLPADALRTLALLQAELPLKKAA K A Q L R T 3 1 0 2 0 1 2 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 12 0 2 4 1326.6416 P67087 P67087 237 248 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2 3.4223E-19 131.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 79109000 21895000 21214000 0 0 16903000 19097000 0 0 377 400 405 2198;2199;2200;2201 1578;1579;1580;1581 1578 4 21895000 21715000 0 0 20390000 21155000 0 0 AQEELGYQPVITLDEGIEK GVSKLNFDFTLDITRAQEELGYQPVITLDE LGYQPVITLDEGIEKTAAWLRDHGKLPR__ R A Q E K T 1 0 0 1 0 2 4 2 0 2 2 1 0 0 1 0 1 0 1 1 0 0 19 0 4 2 2131.0685 P75821 P75821 306 324 ybjS Uncharacterized protein YbjS yes yes 2 1.0688E-44 144.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24479000 7828100 4929600 0 0 5024500 6697200 0 0 378 408 406 2202;2203;2204;2205 1582;1583;1584;1585;1586;1587 1583 6 7828100 5045900 0 0 6061100 7419000 0 0 AQEILGCPVQVISGEEEAR ATLRLAVNAGDFIAKAQEILGCPVQVISGE LGCPVQVISGEEEARLIYQGVAHTTGGADQ K A Q A R L 2 1 0 0 1 2 4 2 0 2 1 0 0 0 1 1 0 0 0 2 0 0 19 0 4 3 2084.0208 P25552 P25552 100 118 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 1.892E-144 207.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 86175000 19304000 16228000 0 0 24514000 26129000 0 0 379 316 407 2206;2207;2208;2209 1588;1589;1590;1591 1591 4 19304000 16611000 0 0 29571000 28945000 0 0 AQEVTADNNQQAASGAQPEQSK VISGLQKVRPGVQVKAQEVTADNNQQAASG NNQQAASGAQPEQSKS______________ K A Q S K S 5 0 2 1 0 5 2 1 0 0 0 1 0 0 1 2 1 0 0 1 0 0 22 0 2 6 2271.0363 P0AE06 P0AE06 375 396 acrA Multidrug efflux pump subunit AcrA yes yes 2 1.801E-14 118.13 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 18875000 3048100 5200900 0 0 4720400 5905800 0 0 380 232 408 2210;2211;2212;2213 1592;1593 1592 2 3048100 5323600 0 0 5694300 6542300 0 0 AQFEEER DAAVAGKITDVEVLKAQFEEERVALVAKIG ITDVEVLKAQFEEERVALVAKIGENINIRR K A Q E R V 1 1 0 0 0 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 7 0 3 1 907.40356 P0A6P1 P0A6P1 113 119 tsf Elongation factor Ts yes yes 2 0.0035493 70.912 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 15665000 5185400 3533600 0 0 3474800 3470900 0 0 381 77 409 2214;2215;2216;2217;2218;2219 1594;1595;1596;1597 1596 4 5185400 3617000 0 0 9318200 7447400 0 0 AQGVQLTAK GRMPYKGSVENGAYKAQGVQLTAKLGYPIT ENGAYKAQGVQLTAKLGYPITDDLDIYTRL K A Q A K L 2 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 0 2 914.51853 P0A910 P0A910 95 103 ompA Outer membrane protein A yes yes 2 0.0047369 39.324 By MS/MS 1 0 0 0 0 0 0 0 0 0 382 158 410 2220 1598 1598 1 0 0 0 0 0 0 0 0 AQITDVRQE CGQLQMIQEQISNLEAQITDVRQEIECQNQ QISNLEAQITDVRQEIECQNQEYSLLLSIK E A Q Q E I 1 1 0 1 0 2 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 9 1 0 1 1058.5356 CON__P35527 CON__P35527 421 429 yes yes 2 0.00047893 102.51 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 254890000 7855600 6311900 25122000 32214000 6657000 7519300 81008000 88198000 + 383 15 411 2221;2222;2223;2224;2225;2226;2227;2228 1599 1599 1 120700000 96258000 213460000 244230000 102490000 113970000 623450000 506150000 AQIVGMNVGTLK VPYEVGRAQFKHLARAQIVGMNVGTLKILF LARAQIVGMNVGTLKILFHRETKEILGIHC R A Q L K I 1 0 1 0 0 1 0 2 0 1 1 1 1 0 0 0 1 0 0 2 0 0 12 0 0 1 1229.6802 P27306 P27306 386 397 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 1.785E-07 102.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 164680000 46014000 52317000 0 0 34471000 31879000 0 0 384 323 412 2229;2230;2231;2232 1600;1601;1602;1603;1604 1602 5 46014000 53552000 0 0 41583000 35315000 0 0 AQKLTGRDPDFHRRE HWKPLAGKASLVWDEAQKLTGRDPDFHRRE AQKLTGRDPDFHRRELWEAIEAGDFPEYEL E A Q R E L 1 3 0 2 0 1 1 1 1 0 1 1 0 1 1 0 1 0 0 0 0 0 15 4 0 2 1824.9343 P21179 P21179 307 321 katE Catalase HPII yes yes 4;5 1.4141E-06 68.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 365640000 17440000 50826000 36865000 61297000 28147000 52350000 57465000 61249000 385 293 413 2233;2234;2235;2236;2237;2238;2239;2240;2241;2242;2243;2244;2245;2246;2247;2248 1605;1606;1607;1608;1609;1610;1611;1612;1613;1614 1607 10 267960000 775100000 313230000 464720000 433360000 793440000 442260000 351500000 AQLASTE PQSRAKLDANLKDFEAQLASTETQVGNELA DANLKDFEAQLASTETQVGNELAPLKGKGY E A Q T E T 2 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 7 0 0 2 718.34973 P39172 P39172 182 188 znuA High-affinity zinc uptake system protein ZnuA yes yes 1 0.0083561 69.39 By matching By matching By MS/MS By MS/MS 1 1 1 1 16277000 5674800 5310300 0 0 2813800 2478300 0 0 386 361 414 2249;2250;2251;2252 1615;1616 1615 0 87191000 80983000 0 0 43321000 37562000 0 0 AQLITLR ESLWISKQNDPNEARAQLITLRRSVLKLTG QNDPNEARAQLITLRRSVLKLTGDVLNDDP R A Q L R R 1 1 0 0 0 1 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 7 0 0 1 813.50724 P0ADM8 P0ADM8 142 148 yieE Uncharacterized protein YieE yes yes 2 0.003536 62.659 By MS/MS 1 0 0 0 0 0 0 0 0 0 387 223 415 2253 1617 1617 1 0 0 0 0 0 0 0 0 AQLQEIAQTK GSGKPNKDKVGKISRAQLQEIAQTKAADMT GKISRAQLQEIAQTKAADMTGADIEAMTRS R A Q T K A 2 0 0 0 0 3 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1 2 1128.6139 P0A7J7 P0A7J7 104 113 rplK 50S ribosomal protein L11 yes yes 2 2.2511E-92 193.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 104740000 26980000 22895000 0 0 27750000 27116000 0 0 388 107 416 2254;2255;2256;2257 1618;1619;1620;1621 1618 4 26980000 23435000 0 0 33474000 30038000 0 0 AQLYAFDPALEGLR NAQISVPASNVETFRAQLYAFDPALEGLRL RAQLYAFDPALEGLRLNIALDDDGKSFWVL R A Q L R L 3 1 0 1 0 1 1 1 0 0 3 0 0 1 1 0 0 0 1 0 0 0 14 0 1 4 1562.8093 P24188 P24188 81 94 yceA UPF0176 protein YceA yes yes 2 1.8409E-11 103.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38559000 12816000 11343000 0 0 6467400 7932100 0 0 389 310 417 2258;2259;2260;2261 1622;1623;1624;1625 1623 4 12816000 11611000 0 0 7801700 8787000 0 0 AQSLLEQIRHIDGDFEFE LVLALLWTGGHPSKEAQSLLEQIRHIDGDF LLEQIRHIDGDFEFETYYSLSCHNCPDVVQ E A Q F E T 1 1 0 2 0 2 3 1 1 2 2 0 0 2 0 1 0 0 0 0 0 0 18 1 2 1 2146.0331 P35340 P35340 105 122 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3 0.0030518 43.37 By MS/MS By matching 1 1 49826000 0 0 0 0 18058000 31768000 0 0 390 348 418 2262;2263 1626 1626 1 0 0 0 0 278020000 481490000 0 0 AQSRMFGLEECQP FGPEKEDEFWLQGLPAQSRMFGLEECQPLT LPAQSRMFGLEECQPLTPDRWLNEGDTISI P A Q Q P L 1 1 0 0 1 2 2 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 13 1 2 1 1551.681 P75849 P75849 92 104 ycbL Uncharacterized protein YcbL yes yes 2 0.0068726 36.693 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 391 410 419 2264;2265 1627;1628 1627 317 2 0 0 0 0 0 0 0 0 AQSVVDYLISK RIGSDAYNQGLSERRAQSVVDYLISKGIPA SERRAQSVVDYLISKGIPADKISARGMGES R A Q S K G 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 1 2 0 0 11 0 0 1 1221.6605 P0A910 P0A910 278 288 ompA Outer membrane protein A yes yes 2 5.2751E-05 95.573 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36278000 8931800 8208400 0 0 8738600 10399000 0 0 392 158 420 2266;2267;2268;2269 1629;1630;1631;1632 1629 4 8931800 8402200 0 0 10541000 11520000 0 0 AQTILEAQGEVAR NGQAQRILEEARAYKAQTILEAQGEVARFA YKAQTILEAQGEVARFAKLLPEYKAAPEIT K A Q A R F 3 1 0 0 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 13 0 2 3 1384.731 P0ABC7 P0ABC7 295 307 hflK Modulator of FtsH protease HflK yes yes 2 0.004591 53.08 By matching By matching By MS/MS 1 1 1 9738400 0 3354000 0 0 3279000 3105400 0 0 393 197 421 2270;2271;2272 1633 1633 1 0 3433200 0 0 3955400 3440100 0 0 AQVQAAFEEIAR ______________________________ SPKAQVQAAFEEIARRSMHDLSFLHPSMPV K A Q A R R 4 1 0 0 0 2 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 12 0 2 4 1331.6834 P0AAN1 P0AAN1 14 25 hybE Hydrogenase-2 operon protein HybE yes yes 2 0.012941 50.284 By matching By MS/MS By matching By matching 1 1 2 1 14289000 2712000 3124400 0 0 5419500 3033100 0 0 394 186 422 2273;2274;2275;2276;2277 1634 1634 1 2712000 3198100 0 0 7104900 4323700 0 0 AQYEEIANR NNRNLDLDSIIAEVKAQYEEIANRSRTEAE IIAEVKAQYEEIANRSRTEAESWYQTKYEE K A Q N R S 2 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 2 2 1092.52 CON__P13647 CON__P13647 344 352 yes yes 2 2.414E-37 161.9 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 95524000 14842000 18194000 0 0 30661000 31826000 0 0 + 395 13 423 2278;2279;2280;2281 1635;1636;1637;1638 1638 4 14842000 18624000 0 0 36987000 35256000 0 0 AQYEEIAQR NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE IIAEVKAQYEEIAQRSKEEAEALYHSKYEE K A Q Q R S 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 0 2 2 1106.5356 CON__P35908v2;CON__P35908;CON__P19013;CON__P48668;CON__P04259;CON__P02538 CON__P35908v2 354 362 no no 2 8.1607E-62 150.35 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 526510000 75878000 84534000 0 0 182420000 183680000 0 0 + 396 16;5 424 2282;2283;2284;2285;2286 1639;1640;1641;1642 1641 0 75878000 86529000 0 0 220050000 203480000 0 0 AQYVVTR SIDPELAREKFAELRAQYVVTRDTIKAKGR REKFAELRAQYVVTRDTIKAKGRSHATAQE R A Q T R D 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 7 0 0 1 835.4552 P00579 P00579 226 232 rpoD RNA polymerase sigma factor RpoD yes yes 2 5.2122E-35 162.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 483370000 121420000 210360000 0 0 87864000 63731000 0 0 397 27 425 2287;2288;2289;2290 1643;1644;1645;1646 1645 4 121420000 215320000 0 0 105990000 70599000 0 0 ARDIHTSTLELFEK RKVVTSDTRIIAGAKARDIHTSTLELFEKV KARDIHTSTLELFEKVLGPTTTTLAWKKAR K A R E K V 1 1 0 1 0 0 2 0 1 1 2 1 0 1 0 1 2 0 0 0 0 0 14 1 2 1 1658.8628 P42596 P42596 144 157 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 3 6.2727E-63 163.23 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 132820000 48810000 37186000 0 0 19484000 24973000 2362200 0 398 366 426 2291;2292;2293;2294;2295 1647;1648;1649;1650 1648 4 48810000 38064000 0 0 23504000 27664000 18180000 0 ARDPKGLYKKARAGE RFIEVFVDTPLAICEARDPKGLYKKARAGE ARDPKGLYKKARAGELRNFTGIDSVYEAPE E A R G E L 3 2 0 1 0 0 1 2 0 0 1 3 0 0 1 0 0 0 1 0 0 0 15 5 0 4 1658.9216 P0A6J1 P0A6J1 141 155 cysC Adenylyl-sulfate kinase yes yes 4;5 6.9403E-06 67.136 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 2 2 167790000 5048500 13707000 16265000 36334000 4826600 5958400 37678000 47972000 399 73 427 2296;2297;2298;2299;2300;2301;2302;2303;2304;2305;2306;2307 1651;1652;1653;1654;1655;1656;1657;1658;1659;1660;1661 1652 11 77568000 209030000 138200000 275470000 74309000 90308000 289980000 275310000 ARIRAKASQLDE RKDRLDNNDMIDQLEARIRAKASQLDEARR QLEARIRAKASQLDEARRIDVQQVEK____ E A R D E A 3 2 0 1 0 1 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 12 3 0 3 1356.7474 P62620 P62620 350 361 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) yes yes 3 0.011536 37.426 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 18434000 1213100 2307200 1871800 3415700 3626600 0 5999600 0 400 389 428 2308;2309;2310;2311;2312;2313;2314 1662;1663 1662 2 18639000 35186000 15904000 25897000 55834000 0 46174000 0 ARKTGFDE QATPARGEPDKLAIEARKTGFDEIYLPFRA PDKLAIEARKTGFDEIYLPFRADQAQREAS E A R D E I 1 1 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 8 2 0 1 922.45084 P37127 P37127 203 210 aegA Protein AegA yes yes 2 0.0081937 67.032 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14366000 0 0 2952600 3438100 0 0 3982700 3992700 401 355 429 2315;2316;2317;2318 1664;1665 1664 2 0 0 25088000 26066000 0 0 30652000 22913000 ARLEEGLNPNAILVPQQGVTR FPNPDHTLLPGMFVRARLEEGLNPNAILVP LNPNAILVPQQGVTRTPRGDATVLVVGADD R A R T R T 2 2 2 0 0 2 2 2 0 1 3 0 0 0 2 0 1 0 0 2 0 0 21 1 2 4 2274.2444 P0AE06 P0AE06 295 315 acrA Multidrug efflux pump subunit AcrA yes yes 3 2.9622E-05 49.089 By MS/MS By matching By matching 1 1 1 21095000 11531000 5617400 0 0 0 3945700 0 0 402 232 430 2319;2320;2321 1666 1666 1 11531000 5750000 0 0 0 4371000 0 0 ARLSDLITGFVDPNAEEDLAPTATHVGSE ITYLLEQYDRVEAEEARLSDLITGFVDPNA AEEDLAPTATHVGSELSQEDLDDDEDEDEE E A R S E L 4 1 1 3 0 0 3 2 1 1 3 0 0 1 2 2 3 0 0 2 0 0 29 1 2 6 3024.4676 P00579 P00579 156 184 rpoD RNA polymerase sigma factor RpoD yes yes 3 0.00033518 55.158 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 68034000 5390700 4961000 0 0 33158000 24524000 0 0 403 27 431 2322;2323;2324;2325 1667;1668 1667 2 82826000 75655000 0 0 510490000 371700000 0 0 ARPVNNAALER GATKAKKSEPAAATRARPVNNAALERLASV AATRARPVNNAALERLASVTDRVQARPVPS R A R E R L 3 2 2 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 11 1 1 4 1209.6578 P06710 P06710 439 449 dnaX DNA polymerase III subunit tau yes yes 3 0.0039799 45.653 By MS/MS By matching 1 1 6233100 3414100 2819000 0 0 0 0 0 0 404 51 432 2326;2327 1669 1669 1 3414100 2885500 0 0 0 0 0 0 ARQAGAEMTE GLNVGSKLLAWAEEEARQAGAEMTELSTNV WAEEEARQAGAEMTELSTNVKRHDAHRFYL E A R T E L 3 1 0 0 0 1 2 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 10 1 1 3 1062.4764 P16691 P16691 105 114 phnO Protein PhnO yes yes 2 0.0040619 60.59 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 23675000 0 0 6005200 5490800 0 0 4912100 7266400 405 286 433;434 2328;2329;2330;2331;2332;2333;2334 1670;1671;1672;1673 1671 236 4 0 0 51026000 41629000 0 0 37805000 41701000 ARRIDVQQVEK QLEARIRAKASQLDEARRIDVQQVEK____ QLDEARRIDVQQVEK_______________ E A R E K - 1 2 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 11 2 1 1 1340.7524 P62620 P62620 362 372 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) yes yes 3 0.0014921 57.019 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 44123000 2502000 2818400 4558500 3612500 5633800 6331900 7965500 10700000 406 389 435 2335;2336;2337;2338;2339;2340;2341;2342 1674;1675;1676;1677;1678;1679 1676 4 38443000 42981000 38733000 27389000 86737000 95970000 61305000 61406000 ARRPKEPAILAE KDITGGLPRVADLFEARRPKEPAILAEISG LFEARRPKEPAILAEISGIVSFGKETKGKR E A R A E I 3 2 0 0 0 0 2 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 12 3 1 5 1349.7779 P0A8T7 P0A8T7 1147 1158 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 0.0060655 37.426 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 36303000 2228800 2880100 5647200 0 0 1595500 11017000 12934000 407 153 436 2343;2344;2345;2346;2347;2348 1680;1681;1682;1683 1680 4 34244000 43922000 47984000 0 0 24183000 84790000 74225000 ARTLMLDEQAP AHISDCMQDRAFRHAARTLMLDEQAPTLQI FRHAARTLMLDEQAPTLQIKDVDLTQYADK A A R A P T 2 1 0 1 0 1 1 0 0 0 2 0 1 0 1 0 1 0 0 0 0 0 11 1 1 2 1243.6231 P33029 P33029 327 337 yeiQ Uncharacterized oxidoreductase YeiQ yes yes 2 0.00411 42.109 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 408 342 437 2349;2350;2351 1684 1684 274 63 0 0 0 0 0 0 0 0 0 ARVEDALHATR IKVGAATEVEMKEKKARVEDALHATRAAVE KEKKARVEDALHATRAAVEEGVVAGGGVAL K A R T R A 3 2 0 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 11 1 1 3 1237.6527 P0A6F5 P0A6F5 394 404 groL 60 kDa chaperonin yes yes 2;3 5.885E-65 176.18 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 592730000 164970000 196990000 0 0 125920000 104850000 0 0 409 68 438 2352;2353;2354;2355;2356;2357;2358;2359 1685;1686;1687;1688;1689;1690;1691;1692 1691 8 164970000 201640000 0 0 151900000 116150000 0 0 ARYLGPKLKLSRRE ______________________________ MARYLGPKLKLSRREGTDLFLKSGVRAIDT M A R R E G 1 3 0 0 0 0 1 1 0 0 3 2 0 0 1 1 0 0 1 0 0 0 14 5 0 2 1686.0053 P0A7V8 P0A7V8 2 15 rpsD 30S ribosomal protein S4 yes yes 4 0.020118 16.223 By MS/MS By MS/MS 1 1 5882600 0 3632200 0 0 2250400 0 0 0 410 130 439 2360;2361 1693 1693 1 0 55392000 0 0 34647000 0 0 0 ASAEQVDPRDE IIMDQHEEIEAVEPEASAEQVDPRDEKVAN VEPEASAEQVDPRDEKVANLEAQLAEAQTR E A S D E K 2 1 0 2 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 11 1 1 3 1215.5368 P09372 P09372 32 42 grpE Protein GrpE yes yes 2 2.101E-07 110.14 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 79376000 13725000 15068000 11700000 11692000 6677900 5404800 7893300 7214700 411 62 440 2362;2363;2364;2365;2366;2367;2368;2369 1694;1695;1696;1697;1698;1699;1700 1698 7 210880000 229790000 99412000 88645000 102810000 81917000 60749000 41404000 ASAGKLVRTLAAVRDAKE TYEEAIARLMATMKEASAGKLVRTLAAVRD GKLVRTLAAVRDAKEAA_____________ E A S K E A 5 2 0 1 0 0 1 1 0 0 2 2 0 0 0 1 1 0 0 2 0 0 18 4 0 5 1855.0639 P0A7J3 P0A7J3 146 163 rplJ 50S ribosomal protein L10 yes yes 3;4 0.00021097 54.764 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 62132000 0 3292100 0 0 5745800 4291600 16761000 32041000 412 106 441 2370;2371;2372;2373;2374;2375 1701;1702;1703;1704;1705 1705 4 0 50205000 0 0 88462000 65046000 129000000 183880000 ASDFVLAMGQGR DFTGSVDGEEFEGGKASDFVLAMGQGRMIP GGKASDFVLAMGQGRMIPGFEDGIKGHKAG K A S G R M 2 1 0 1 0 1 0 2 0 0 1 0 1 1 0 1 0 0 0 1 0 0 12 0 0 2 1250.6078 P0A850 P0A850 182 193 tig Trigger factor yes yes 2 1.4275E-06 86.624 By MS/MS By MS/MS 1 1 17730000 0 10239000 0 0 7490900 0 0 0 413 137 442 2376;2377 1706;1707 1706 2 0 10480000 0 0 9036200 0 0 0 ASDGTFISIDDEEA AEDTRGRLVMSCMTPASDGTFISIDDEEAK PASDGTFISIDDEEAKQFRESVVEWLMTNH P A S E A K 2 0 0 3 0 0 2 1 0 2 0 0 0 1 0 2 1 0 0 0 0 0 14 0 2 1 1468.6205 P33602 P33602 71 84 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0049385 45.022 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18604000 2208800 1715200 0 0 9425400 5255000 0 0 414 345 443 2378;2379;2380;2381 1708 1708 1 13333000 10266000 0 0 13419000 7491000 0 0 ASEGELLAQVEPEDLIK SGIGFGATVKAKSDKASEGELLAQVEPEDL EGELLAQVEPEDLIKFGLIPEFIGRLPVVA K A S I K F 2 0 0 1 0 1 4 1 0 1 3 1 0 0 1 1 0 0 0 1 0 0 17 0 4 3 1839.9466 P0A6H1 P0A6H1 281 297 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 2 3.6439E-16 96.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20221000 5332000 3549400 0 0 6220400 5119300 0 0 415 70 444 2382;2383;2384;2385 1709;1710;1711;1712 1711 4 5332000 3633200 0 0 7503700 5671000 0 0 ASEVKPPRDITAE NLKEKIKELHQQYKEASEVKPPRDITAEFL KEASEVKPPRDITAEFLVKSKHRDLTALCK E A S A E F 2 1 0 1 0 0 2 0 0 1 0 1 0 0 2 1 1 0 0 1 0 0 13 2 1 4 1411.7307 LSD1-FL-His LSD1-FL-His 467 479 yes yes 2;3 3.383E-136 228.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 2 2 31343000000 1728300000 1364900000 6144000000 5917700000 2127100000 2245900000 4996100000 6818600000 416 24 445 2386;2387;2388;2389;2390;2391;2392;2393;2394;2395;2396;2397;2398;2399;2400;2401;2402 1713;1714;1715;1716;1717;1718;1719;1720;1721;1722;1723;1724;1725;1726;1727;1728;1729;1730;1731;1732;1733;1734;1735;1736;1737;1738;1739;1740;1741 1719 29 26539000000 20815000000 52205000000 44865000000 32749000000 34039000000 38451000000 39131000000 ASGEDLLRRPE AAEVNAHLTAPLSREASGEDLLRRPEMTYE LSREASGEDLLRRPEMTYEKLTTLTPFAPA E A S P E M 1 2 0 1 0 0 2 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 11 2 1 2 1241.6364 P0A6U3 P0A6U3 507 517 mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG yes yes 3 0.010822 32.008 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 21387000 1466100 0 3909100 3194100 1369200 0 6026200 5422100 417 82 446 2403;2404;2405;2406;2407;2408 1742 1742 1 22526000 0 33215000 24216000 21080000 0 46379000 31117000 ASGLEVSENAIR LVPQPNAATALAALRASGLEVSENAIRDGI ALRASGLEVSENAIRDGIASAILPGRFQIV R A S I R D 2 1 1 0 0 0 2 1 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 2 2 1244.6361 P08192 P08192 267 278 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 2 2.1357E-13 119.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29180000 8072900 7554400 0 0 6668600 6884400 0 0 418 59 447 2409;2410;2411;2412 1743;1744;1745;1746 1743 4 8072900 7732700 0 0 8044400 7626400 0 0 ASLENSLEETK MQNLEIELQSQLSMKASLENSLEETKGRYC LSMKASLENSLEETKGRYCMQLAQIQEMIG K A S T K G 1 0 1 0 0 0 3 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 11 0 3 1 1219.5932 CON__P02533;CON__Q3ZAW8;CON__Q9Z2K1;CON__P08779 CON__P02533 353 363 no no 2 2.6065E-64 173.37 By matching By MS/MS By matching By MS/MS 1 1 1 1 79915000 11983000 11703000 0 0 23132000 33098000 0 0 + 419 4;10 448 2413;2414;2415;2416 1747;1748 1748 2 11983000 11980000 0 0 27904000 36665000 0 0 ASLGVDKDVYLTIPR KEFASEPVWFGDSDRASLGVDKDVYLTIPR ASLGVDKDVYLTIPRGRMKDLKASYVLNSS R A S P R G 1 1 0 2 0 0 0 1 0 1 2 1 0 0 1 1 1 0 1 2 0 0 15 1 0 2 1645.9039 P0AEB2 P0AEB2 317 331 dacA D-alanyl-D-alanine carboxypeptidase DacA yes yes 3 0.00069253 55.186 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 20166000 6063600 3506800 0 0 4765200 5830500 0 0 420 234 449 2417;2418;2419;2420 1749;1750;1751 1751 2 6063600 3589500 0 0 5748200 6458900 0 0 ASLSAFDYLIR VPYKQIIIATGEGAKASLSAFDYLIRTKTA EGAKASLSAFDYLIRTKTA___________ K A S I R T 2 1 0 1 0 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 0 11 0 0 2 1254.6608 P35340 P35340 507 517 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 2.6804E-113 237.61 By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 3294100000 884310000 940300000 0 0 544990000 924490000 0 0 421 348 450 2421;2422;2423;2424;2425;2426 1752;1753;1754 1753 3 884310000 962490000 0 0 657560000 1024400000 0 0 ASLVWDEAQK KATFVRFHWKPLAGKASLVWDEAQKLTGRD PLAGKASLVWDEAQKLTGRDPDFHRRELWE K A S Q K L 2 0 0 1 0 1 1 0 0 0 1 1 0 0 0 1 0 1 0 1 0 0 10 0 1 2 1145.5717 P21179 P21179 300 309 katE Catalase HPII yes yes 2 1.3151E-20 138.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 146350000 47612000 34700000 0 0 23426000 35814000 0 4794000 422 293 451 2427;2428;2429;2430;2431 1755;1756;1757;1758 1758 4 47612000 35519000 0 0 28259000 39674000 0 27512000 ASPMVKAKDE VIRSMVMRTKHAVTEASPMVKAKDERRERR HAVTEASPMVKAKDERRERRDDFANETADD E A S D E R 2 0 0 1 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 10 2 0 3 1074.5379 P02358 P02358 99 108 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 2;3 5.7418E-05 84.213 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 2 3 3 143180000 8751700 8289400 24231000 31586000 3783900 3324700 28653000 34556000 423 35 452;453 2432;2433;2434;2435;2436;2437;2438;2439;2440;2441;2442;2443;2444;2445;2446;2447;2448;2449;2450 1759;1760;1761;1762;1763;1764;1765;1766;1767;1768;1769 1763 64 11 134470000 126420000 205890000 239470000 58257000 50391000 220520000 198310000 ASPMVKAKDERRE VIRSMVMRTKHAVTEASPMVKAKDERRERR TEASPMVKAKDERRERRDDFANETADDAEA E A S R E R 2 2 0 1 0 0 2 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 13 4 1 3 1515.7828 P02358 P02358 99 111 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 3;4 0.0017815 44.616 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 1 3 3 3 74125000 2688500 1351300 10307000 12718000 982000 1760200 17875000 26442000 424 35 454;455 2451;2452;2453;2454;2455;2456;2457;2458;2459;2460;2461;2462;2463;2464;2465;2466;2467;2468 1770;1771;1772;1773;1774;1775;1776;1777 1777 64 8 41308000 20607000 87579000 96425000 15119000 26678000 137570000 151750000 ASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR GAVGERTPRKKEPPRASPPGGLAEPPGSAG ATPMETGIAETPEGRRTSRRKRAKVEYREM R A S G R R 6 1 0 0 0 1 4 8 0 1 1 0 1 0 9 3 4 0 0 2 0 0 41 0 4 15 3794.8421 LSD1-FL-His LSD1-FL-His 70 110 yes yes 4 5.9338E-63 109.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 5360200000 1233700000 1508300000 0 0 885880000 1732200000 0 0 425 24 456;457 2469;2470;2471;2472;2473;2474;2475;2476 1778;1779;1780;1781;1782;1783;1784;1785 1785 41 8 1233700000 1544000000 0 0 1068600000 1918900000 0 0 ASQIDRLATLP KFEVKAAAFEGELIPASQIDRLATLPTYEE ELIPASQIDRLATLPTYEEAIARLMATMKE P A S L P T 2 1 0 1 0 1 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 11 1 0 2 1183.6561 P0A7J3 P0A7J3 120 130 rplJ 50S ribosomal protein L10 yes yes 2 0.015215 40.002 By MS/MS By MS/MS 1 1 6257700 0 0 0 0 3607400 2650300 0 0 426 106 458 2477;2478 1786 1786 0 0 0 0 0 5135700 3778000 0 0 ASRLAVHSAME ATVSRVINNSPKASEASRLAVHSAMESLSY KASEASRLAVHSAMESLSYHPNANARALAQ E A S M E S 3 1 0 0 0 0 1 0 1 0 1 0 1 0 0 2 0 0 0 1 0 0 11 1 0 3 1170.5815 P03024 P03024 31 41 galR HTH-type transcriptional regulator GalR yes yes 3 0.0064614 38.58 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 10459000 0 0 0 2031900 0 338440 3706900 4381500 427 42 459 2479;2480;2481;2482 1787 1787 69 1 0 0 0 15405000 0 5129600 28529000 25145000 ASSGLNEDEIQK AKDKNSGKEQKITIKASSGLNEDEIQKMVR TIKASSGLNEDEIQKMVRDAEANAEADRKF K A S Q K M 1 0 1 1 0 1 2 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 12 0 2 1 1289.6099 P0A6Y8 P0A6Y8 503 514 dnaK Chaperone protein DnaK yes yes 2 5.4401E-161 225.93 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1821200000 433320000 562470000 0 0 394350000 431060000 0 0 428 86 460 2483;2484;2485;2486 1788;1789;1790;1791 1789 4 433320000 575740000 0 0 475710000 477520000 0 0 ASSTQSRPVNAGAK TPMATQRQTPATAKKASSTQSRPVNAGAKK KASSTQSRPVNAGAKKRPKAAVGR______ K A S A K K 3 1 1 0 0 1 0 1 0 0 0 1 0 0 1 3 1 0 0 1 0 0 14 1 0 4 1372.7059 Q46861 Q46861 717 730 ygiQ UPF0313 protein YgiQ yes yes 3 3.7799E-06 72.496 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 20158000 5626100 9476700 0 0 2742700 2312200 0 0 429 441 461 2487;2488;2489;2490;2491;2492 1792;1793 1793 1 5626100 12055000 0 0 3308500 2660100 0 0 ASSVVNTAFEQR SEQGLITRHHGGAGRASSVVNTAFEQREVS AGRASSVVNTAFEQREVSQTEEKKAIAEAV R A S Q R E 2 1 1 0 0 1 1 0 0 0 0 0 0 1 0 2 1 0 0 2 0 0 12 0 1 2 1307.647 P32144 P32144 64 75 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 3.1337E-26 159.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 53237000 12348000 13605000 0 0 16068000 11216000 0 0 430 339 462 2493;2494;2495;2496 1794;1795;1796;1797 1794 4 12348000 13926000 0 0 19383000 12425000 0 0 ASTISNVVR RDSGIKCIYVAIGQKASTISNVVRKLEEHG VAIGQKASTISNVVRKLEEHGALANTIVVV K A S V R K 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 2 0 0 9 0 0 1 945.52434 P0ABB0 P0ABB0 202 210 atpA ATP synthase subunit alpha yes yes 2 0.002085 71.692 By MS/MS By MS/MS By matching 1 1 1 16509000 0 4134900 0 0 5936400 6437800 0 0 431 193 463 2497;2498;2499 1798;1799 1799 2 0 4232500 0 0 7161100 7131600 0 0 ASVEIDRK QNGISYSKFINGLKKASVEIDRKILADIAV FINGLKKASVEIDRKILADIAVFDKVAFTA K A S R K I 1 1 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 8 1 1 1 916.49779 P0A7L3 P0A7L3 86 93 rplT 50S ribosomal protein L20 yes yes 2 3.1842E-05 113.41 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 95121000 41916000 29720000 0 0 11047000 12438000 0 0 432 111 464 2500;2501;2502;2503 1800;1801;1802;1803 1801 4 41916000 30421000 0 0 13326000 13779000 0 0 ASVESNFALR ILRQSKKVIGIGSPRASVESNFALRELVGE IGSPRASVESNFALRELVGEENFYTGIAHG R A S L R E 2 1 1 0 0 0 1 0 0 0 1 0 0 1 0 2 0 0 0 1 0 0 10 0 1 2 1092.5564 P33602 P33602 320 329 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 3.248E-151 222.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 301960000 101180000 68079000 0 0 53416000 79283000 0 0 433 345 465 2504;2505;2506;2507 1804;1805;1806;1807 1806 4 101180000 69685000 0 0 64436000 87828000 0 0 ASVLHNMVRA GRRTPDDSFLEWHKPASVLHNMVRAVADPW EWHKPASVLHNMVRAVADPWPGAFSYVGNQ P A S R A V 2 1 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 2 0 0 10 1 0 1 1096.5811 P77398 P77398 214 223 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.4391E-25 169.09 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 1 3 627220000 128530000 62173000 0 0 74068000 362450000 0 0 434 432 466;467 2508;2509;2510;2511;2512;2513;2514;2515;2516;2517;2518;2519 1808;1809;1810;1811;1812;1813;1814;1815;1816;1817 1816 330 8 775850000 372110000 0 0 105450000 516680000 0 0 ASVLHNMVRAVA GRRTPDDSFLEWHKPASVLHNMVRAVADPW HKPASVLHNMVRAVADPWPGAFSYVGNQKF P A S V A D 3 1 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 3 0 0 12 1 0 2 1266.6867 P77398 P77398 214 225 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 9.6388E-11 87.913 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 6 4 255490000 6066500 7810200 0 0 98191000 143420000 0 0 435 432 468;469 2520;2521;2522;2523;2524;2525;2526;2527;2528;2529;2530;2531;2532;2533 1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828 1821 330 10 36621000 46744000 0 0 139790000 204450000 0 0 ATAALLTEKLR GVRESLEEQTMNMAKATAALLTEKLRHACG NMAKATAALLTEKLRHACGAAVECVISDTC K A T L R H 3 1 0 0 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 11 1 1 3 1185.7081 P69922 P69922 36 46 fucI L-fucose isomerase yes yes 2 0.0038289 71.223 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 436 406 470 2534;2535;2536;2537 1829 1829 66 0 0 0 0 0 0 0 0 0 ATADYEVTR RRHRSQGQEEAEKLRATADYEVTRTLAEAE EAEKLRATADYEVTRTLAEAERQGRIMRGE R A T T R T 2 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 9 0 1 2 1024.4825 P0ABC3 P0ABC3 251 259 hflC Modulator of FtsH protease HflC yes yes 2 0.0016321 54.982 By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 17046000 0 0 5797500 0 0 3152600 4764300 3331200 437 196 471 2538;2539;2540;2541;2542 1830;1831 1830 2 0 0 49261000 0 0 3492300 36667000 19117000 ATAKIVSE ______________________________ ______________________________ E A T S E F 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 8 1 0 2 817.45453 P0ADZ4 P0ADZ4 7 14 rpsO 30S ribosomal protein S15 yes yes 2 1.5581E-34 151.5 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 2 2 28180000000 1359100000 1322500000 5167700000 4923300000 1135000000 1194800000 5834600000 7242800000 438 231 472;473 2543;2544;2545;2546;2547;2548;2549;2550;2551;2552;2553 1832;1833;1834;1835;1836;1837;1838;1839 1833 6 20882000000 20147000000 43909000000 37327000000 17474000000 18109000000 44904000000 41565000000 ATAVAIHGK GDFNMHLWLSPEIARATAVAIHGKLVELMP SPEIARATAVAIHGKLVELMPQSRAKLDAN R A T G K L 3 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 1 0 0 9 0 0 3 866.4974 P39172 P39172 153 161 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 0.00055718 95.531 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 292690000 122460000 79162000 0 0 49762000 41305000 0 0 439 361 474 2554;2555;2556;2557 1840;1841;1842;1843;1844 1841 5 122460000 81031000 0 0 60028000 45757000 0 0 ATCFGRRTPDDSFLE IKHGNILEIAQRENEATCFGRRTPDDSFLE ATCFGRRTPDDSFLEWHKPASVLHNMVRAV E A T L E W 1 2 0 2 1 0 1 1 0 0 1 0 0 2 1 1 2 0 0 0 0 0 15 2 0 2 1770.7995 P77398 P77398 195 209 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.1299E-14 112.94 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 2117400000 468560000 375550000 200140000 259070000 266690000 235440000 139700000 172290000 440 432 475 2558;2559;2560;2561;2562;2563;2564;2565;2566;2567;2568;2569;2570;2571;2572;2573 1845;1846;1847;1848;1849;1850;1851;1852;1853;1854;1855 1846 11 7199300000 5727200000 1700600000 1964200000 4106000000 3568400000 1075200000 988740000 ATCLLDR IEKKIGRGQFSEVYKATCLLDRKTVALKKV GQFSEVYKATCLLDRKTVALKKVQIFEMMD K A T D R K 1 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 0 1 847.42219 GST-Nek6 GST-Nek6 293 299 yes yes 2 4.0944E-34 158.08 By MS/MS By MS/MS 2 1 116980000 0 0 0 0 66701000 50277000 0 0 441 23 476 2574;2575;2576 1856;1857 1857 2 0 0 0 0 82407000 55695000 0 0 ATCLLDRK IEKKIGRGQFSEVYKATCLLDRKTVALKKV QFSEVYKATCLLDRKTVALKKVQIFEMMDA K A T R K T 1 1 0 1 1 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 8 1 0 1 975.51715 GST-Nek6 GST-Nek6 293 300 yes yes 2 0.016203 49.442 By MS/MS 1 3711800 0 0 0 0 3711800 0 0 0 442 23 477 2577 1858 1858 1 0 0 0 0 4477600 0 0 0 ATCVFAEPQFR AQRLHEIRTQLVEQKATCVFAEPQFRPAVV VEQKATCVFAEPQFRPAVVESVARGTSVRM K A T F R P 2 1 0 0 1 1 1 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 11 0 1 3 1324.6234 P39172 P39172 250 260 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 0.00036909 64.711 By MS/MS 1 0 0 0 0 0 0 0 0 0 443 361 478 2578 1859 1859 1 0 0 0 0 0 0 0 0 ATCVFAEPQFRPAVVESVAR AQRLHEIRTQLVEQKATCVFAEPQFRPAVV AEPQFRPAVVESVARGTSVRMGTLDPLGTN K A T A R G 4 2 0 0 1 1 2 0 0 0 0 0 0 2 2 1 1 0 0 4 0 0 20 1 2 6 2233.1314 P39172 P39172 250 269 znuA High-affinity zinc uptake system protein ZnuA yes yes 3 4.2402E-28 115.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 212180000 70977000 48468000 0 0 46005000 46732000 0 0 444 361 479 2579;2580;2581;2582 1860;1861;1862;1863 1860 4 70977000 49612000 0 0 55496000 51768000 0 0 ATFNSEEK TEEKRWIQQRIESGRATFNSEEKKRFLSEL QRIESGRATFNSEEKKRFLSELTAAEGLER R A T E K K 1 0 1 0 0 0 2 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 8 0 2 1 924.41888 P0AFG3 P0AFG3 193 200 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0064933 58.917 By MS/MS By MS/MS By matching By matching 1 1 1 1 107250000 42595000 41891000 0 0 12725000 10037000 0 0 445 246 480 2583;2584;2585;2586 1864 1864 1 42595000 42880000 0 0 15350000 11119000 0 0 ATGLDALFDATIK IADIYANCGITKKVKATGLDALFDATIKEM VKATGLDALFDATIKEMKEAGDNTIVFTNF K A T I K E 3 0 0 2 0 0 0 1 0 1 2 1 0 1 0 0 2 0 0 0 0 0 13 0 0 3 1334.7082 P0A6K6 P0A6K6 275 287 deoB Phosphopentomutase yes yes 2 5.0055E-14 120.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 76230000 21071000 419150 0 0 28979000 25761000 0 0 446 75 481 2587;2588;2589;2590;2591;2592;2593 1865;1866;1867;1868 1866 4 28345000 6392100 0 0 49774000 28538000 0 0 ATGTPAIQVNTGK IEGDQQTVNDAARIRATGTPAIQVNTGKGC IRATGTPAIQVNTGKGCHLDAQMIADAAPR R A T G K G 2 0 1 0 0 1 0 2 0 1 0 1 0 0 1 0 3 0 0 1 0 0 13 0 0 3 1256.6725 P0AAN3 P0AAN3 152 164 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 2 2.0839E-19 126.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 72104000 19754000 14129000 0 0 19966000 18255000 0 0 447 187 482 2594;2595;2596;2597 1869;1870;1871;1872 1870 4 19754000 14463000 0 0 24085000 20222000 0 0 ATHADSAVNVTK ______________________________ GLKATHADSAVNVTKFCADYKRGFVLGYSH K A T T K F 3 0 1 1 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 2 0 0 12 0 0 3 1212.6099 P64574 P64574 15 26 yghW Uncharacterized protein YghW yes yes 2;3 2.8394E-27 143.79 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 280940000 106240000 82602000 0 0 54344000 37754000 0 0 448 396 483 2598;2599;2600;2601;2602;2603;2604;2605 1873;1874;1875;1876;1877;1878;1879;1880;1881;1882 1880 10 106240000 84552000 0 0 65556000 41823000 0 0 ATIHVDGK ______________________________ ______________________________ M A T G K E 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 1 0 0 8 0 0 1 839.45012 P33602 P33602 2 9 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0016241 91.853 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 82854000 27566000 25777000 0 0 10812000 18699000 0 0 449 345 484 2606;2607;2608;2609 1883;1884;1885;1886;1887 1887 4 27566000 26386000 0 0 13043000 20714000 0 0 ATIHVDGKEYE ______________________________ ______________________________ M A T Y E V 1 0 0 1 0 0 2 1 1 1 0 1 0 0 0 0 1 0 1 1 0 0 11 1 1 1 1260.5986 P33602 P33602 2 12 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 5.0544E-06 83.862 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 236220000 29820000 32443000 33654000 30804000 13158000 11395000 41819000 43131000 450 345 485 2610;2611;2612;2613;2614;2615;2616;2617;2618;2619;2620;2621;2622;2623;2624;2625 1888;1889;1890;1891;1892;1893;1894;1895;1896;1897 1897 10 458180000 494760000 285950000 233540000 202570000 172700000 321850000 247520000 ATIQIAE GMDSKLSGVLDMLEEATIQIAEASDELRHY GVLDMLEEATIQIAEASDELRHYCDRLDLD E A T A E A 2 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 7 0 0 2 744.40177 P05824 P05824 273 279 recN DNA repair protein RecN yes yes 1 0.0151 79.469 By MS/MS By MS/MS By matching By matching 1 1 1 1 10929000 0 0 2486800 2671200 0 0 2753800 3017000 451 49 486 2626;2627;2628;2629 1898;1899 1898 2 0 0 21130000 20252000 0 0 21194000 17314000 ATLAPSLDLVGKI SHPGEVCPAKWKEGEATLAPSLDLVGKI__ GEATLAPSLDLVGKI_______________ E A T K I - 2 0 0 1 0 0 0 1 0 1 3 1 0 0 1 1 1 0 0 1 0 0 13 1 0 3 1296.7653 P0AE08 P0AE08 175 187 ahpC Alkyl hydroperoxide reductase subunit C yes yes 2 0.00083448 61.65 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 1 1 32541000 1820900 2887800 10645000 2907000 5503000 6220400 482090 2074000 452 233 487 2630;2631;2632;2633;2634;2635;2636;2637 1900;1901;1902 1902 3 27978000 44039000 90452000 22040000 84724000 94279000 3710300 11902000 ATLEDLGQAK GGTVISEEIGMELEKATLEDLGQAKRVVIN MELEKATLEDLGQAKRVVINKDTTTIIDGV K A T A K R 2 0 0 1 0 1 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1 2 1044.5451 P0A6F5 P0A6F5 312 321 groL 60 kDa chaperonin yes yes 2 1.8263E-92 194.22 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 3 2050300000 431400000 470360000 0 0 530840000 617710000 0 0 453 68 488 2638;2639;2640;2641;2642;2643;2644;2645;2646 1903;1904;1905;1906;1907 1904 5 487570000 486520000 0 0 640350000 701980000 0 0 ATLEDLGQAKR GGTVISEEIGMELEKATLEDLGQAKRVVIN ELEKATLEDLGQAKRVVINKDTTTIIDGVG K A T K R V 2 1 0 1 0 1 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 11 1 1 2 1200.6463 P0A6F5 P0A6F5 312 322 groL 60 kDa chaperonin yes yes 3 0.013994 39.918 By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 21495000 3996000 5276300 3792600 7150100 0 1279700 0 0 454 68 489 2647;2648;2649;2650;2651 1908 1908 1 3996000 5400900 32226000 54209000 0 1417600 0 0 ATLGEVGNAEHMLR RLRSGEMRKVEADCRATLGEVGNAEHMLRV RATLGEVGNAEHMLRVLGKAGAARWRGVRP R A T L R V 2 1 1 0 0 0 2 2 1 0 2 0 1 0 0 0 1 0 0 1 0 0 14 0 2 2 1496.7406 P60422 P60422 190 203 rplB 50S ribosomal protein L2 yes yes 2;3 0 276.35 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 6374700000 2097200000 1523900000 0 0 1145200000 1608400000 0 0 455 379 490;491 2652;2653;2654;2655;2656;2657;2658;2659;2660;2661;2662;2663;2664;2665;2666;2667 1909;1910;1911;1912;1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923;1924;1925 1918 300 17 2097200000 1559800000 0 0 1381400000 1781700000 0 0 ATLKPEGQAALDQLYSQLSNLDPK KHFTLKSDVLFNFNKATLKPEGQAALDQLY ALDQLYSQLSNLDPKDGSVVVLGYTDRIGS K A T P K D 3 0 1 2 0 3 1 1 0 0 5 2 0 0 2 2 1 0 1 0 0 0 24 1 1 5 2599.3493 P0A910 P0A910 228 251 ompA Outer membrane protein A yes yes 3 0.017328 22.406 By MS/MS 1 42996000 0 0 0 0 42996000 0 0 0 456 158 492 2668 1926 1926 1 0 0 0 0 51867000 0 0 0 ATLQQLE LQLWLDNPKIQLTFEATLQQLEAPYNSDTV PKIQLTFEATLQQLEAPYNSDTVLVHRVHS E A T L E A 1 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 0 1 801.42323 LSD1-FL-His LSD1-FL-His 235 241 yes yes 1 4.5456E-59 147.83 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2 1 1 304900000 46894000 42601000 29104000 25293000 32644000 27279000 45808000 55278000 457 24 493 2669;2670;2671;2672;2673;2674;2675;2676;2677 1927;1928 1928 0 720510000 649670000 247290000 191760000 502580000 399090000 352540000 317230000 ATLQQLEAPYNSDTVLVHRVHSYLE LQLWLDNPKIQLTFEATLQQLEAPYNSDTV NSDTVLVHRVHSYLERHGLINFGIYKRIKP E A T L E R 2 1 1 1 0 2 2 0 2 0 4 0 0 0 1 2 2 0 2 3 0 0 25 1 1 3 2882.4563 LSD1-FL-His LSD1-FL-His 235 259 yes yes 3;4 1.6891E-87 150.53 By MS/MS By MS/MS 2 1 146040000 0 0 0 0 88193000 57848000 0 0 458 24 494 2678;2679;2680 1929;1930;1931;1932 1930 4 0 0 0 0 1357800000 876770000 0 0 ATLVYTQR DAYTPDNVAGKRPDRATLVYTQRCKEAWKD AGKRPDRATLVYTQRCKEAWKDVPVILGGI R A T Q R C 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 2 0 1 1 0 0 8 0 0 1 950.51853 Q46861 Q46861 140 147 ygiQ UPF0313 protein YgiQ yes yes 2 5.1231E-05 110.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30102000 10519000 9099800 0 0 10484000 0 0 0 459 441 495 2681;2682;2683;2684 1933;1934;1935;1936 1933 4 10519000 9314600 0 0 12646000 0 0 0 ATPVELDFSQVEK YEKSRLKVSVSIFGRATPVELDFSQVEKA_ GRATPVELDFSQVEKA______________ R A T E K A 1 0 0 1 0 1 2 0 0 0 1 1 0 1 1 1 1 0 0 2 0 0 13 0 2 2 1461.7351 P0AFG0 P0AFG0 168 180 nusG Transcription termination/antitermination protein NusG yes yes 2 0.0027467 57.836 By matching By MS/MS By MS/MS 1 1 1 15047000 2864000 0 0 0 6338600 5844100 0 0 460 245 496 2685;2686;2687 1937;1938 1937 2 2864000 0 0 0 7646200 6474000 0 0 ATPVELDFSQVEKA YEKSRLKVSVSIFGRATPVELDFSQVEKA_ RATPVELDFSQVEKA_______________ R A T K A - 2 0 0 1 0 1 2 0 0 0 1 1 0 1 1 1 1 0 0 2 0 0 14 1 2 2 1532.7722 P0AFG0 P0AFG0 168 181 nusG Transcription termination/antitermination protein NusG yes yes 2 0.019769 33.057 By MS/MS By MS/MS 1 1 8583000 5698100 2884900 0 0 0 0 0 0 461 245 497 2688;2689 1939 1939 0 5698100 2953000 0 0 0 0 0 0 ATQQHGTQGFAVLSYVYE SEAIRDILRSALAQEATQQHGTQGFAVLSY QHGTQGFAVLSYVYEHEKRDLASRIVSTQH E A T Y E H 2 0 0 0 0 3 1 2 1 0 1 0 0 1 0 1 2 0 2 2 0 0 18 0 0 2 1997.9483 P0A6Z6 P0A6Z6 44 61 nikR Nickel-responsive regulator yes yes 2 5.3518E-29 128.31 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 52633000 2860100 2203900 3018900 1470800 14821000 19540000 1843400 6875400 462 89 498 2690;2691;2692;2693;2694;2695;2696;2697 1940;1941;1942 1941 3 43945000 33610000 25651000 11151000 228180000 296160000 14187000 39457000 ATSDYDRE AIQGRVAQIRQQIEEATSDYDREKLQERVA IRQQIEEATSDYDREKLQERVAKLAGGVAV E A T R E K 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 8 1 0 1 955.3883 P0A6F5 P0A6F5 356 363 groL 60 kDa chaperonin yes yes 2 2.0336E-06 113.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 11 10 1 1 4 10 1 1 788030000 39594000 44175000 128540000 169970000 2120600 9574300 181870000 212180000 463 68 499 2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709;2710;2711;2712;2713;2714;2715;2716;2717;2718;2719;2720;2721;2722;2723;2724;2725;2726;2727;2728;2729;2730;2731;2732;2733;2734;2735;2736 1943;1944;1945;1946;1947;1948;1949;1950;1951;1952;1953;1954;1955;1956;1957;1958;1959;1960;1961;1962;1963;1964;1965;1966;1967;1968;1969 1969 27 608360000 673680000 1092200000 1288700000 32649000 145110000 1399700000 1217600000 ATSDYDREKLQE AIQGRVAQIRQQIEEATSDYDREKLQERVA IEEATSDYDREKLQERVAKLAGGVAVIKVG E A T Q E R 1 1 0 2 0 1 2 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 12 2 1 1 1453.6685 P0A6F5 P0A6F5 356 367 groL 60 kDa chaperonin yes yes 2;3 6.5514E-136 208.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 6148500000 388880000 377420000 1051500000 1169800000 331840000 295150000 1043100000 1490800000 464 68 500 2737;2738;2739;2740;2741;2742;2743;2744;2745;2746;2747;2748;2749;2750;2751;2752 1970;1971;1972;1973;1974;1975;1976;1977;1978;1979;1980;1981 1973 12 5975100000 5755800000 8934400000 8868800000 5109000000 4473400000 8027600000 8555700000 ATSYLSHQLDFNVLNNKPVSLGQALE EKDEMVEQEFNRLLEATSYLSHQLDFNVLN NVLNNKPVSLGQALEVVIQLQEKHVKDEQI E A T L E V 2 0 3 1 0 2 1 1 1 0 5 1 0 1 1 3 1 0 1 2 0 0 26 1 0 3 2857.461 LSD1-FL-His LSD1-FL-His 390 415 yes yes 3 2.1003E-112 173.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 14008000000 19398000 18460000 0 0 2459700000 11511000000 0 0 465 24 501 2753;2754;2755;2756;2757 1982;1983;1984;1985;1986 1986 5 298050000 281520000 0 0 37869000000 174470000000 0 0 ATTPVMQQK ALEKAPAKKEAYRWKATTPVMQQKEVVATP EAYRWKATTPVMQQKEVVATPKALKKALEH K A T Q K E 1 0 0 0 0 2 0 0 0 0 0 1 1 0 1 0 2 0 0 1 0 0 9 0 0 2 1002.5168 P06710 P06710 480 488 dnaX DNA polymerase III subunit tau yes yes 2 3.3099E-05 73.616 By MS/MS By MS/MS By MS/MS 1 1 1 4190200 3068100 0 0 0 0 1122100 0 0 466 51 502 2758;2759;2760 1987;1988;1989 1989 3 3068100 0 0 0 0 1243000 0 0 ATVAYIPK LTSTCEHHFVTIDGKATVAYIPKDSVIGLS FVTIDGKATVAYIPKDSVIGLSKINRIVQF K A T P K D 2 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 8 0 0 3 861.496 P0A6T5 P0A6T5 122 129 folE GTP cyclohydrolase 1 yes yes 2 0.0030043 71.342 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 86730000 17932000 16158000 0 0 23621000 29020000 0 0 467 81 503 2761;2762;2763;2764 1990;1991;1992;1993 1993 4 17932000 16539000 0 0 28494000 32147000 0 0 ATVILAHTIK KIYAAFKKAQETKGKATVILAHTIKGYGMG ETKGKATVILAHTIKGYGMGDAAEGKNIAH K A T I K G 2 0 0 0 0 0 0 0 1 2 1 1 0 0 0 0 2 0 0 1 0 0 10 0 0 2 1065.6546 P0AFG8 P0AFG8 384 393 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0007449 74.376 By MS/MS By MS/MS By MS/MS 1 1 1 18268000 0 5823000 0 0 7031900 5413400 0 0 468 248 504 2765;2766;2767 1994;1995;1996 1996 3 0 5960400 0 0 8482600 5996900 0 0 ATVLATGGAGR ALCIETGEVVYFKARATVLATGGAGRIYQS FKARATVLATGGAGRIYQSTTNAHINTGDG R A T G R I 3 1 0 0 0 0 0 3 0 0 1 0 0 0 0 0 2 0 0 1 0 0 11 0 0 3 972.53524 P0AC41 P0AC41 197 207 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 1.1566E-31 151.97 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 168960000 53877000 45626000 0 0 38028000 31427000 0 0 469 203 505 2768;2769;2770;2771 1997;1998;1999;2000 2000 4 53877000 46703000 0 0 45874000 34814000 0 0 ATVNQLVR ______________________________ ______________________________ M A T V R K 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 8 0 0 1 899.51886 P0A7S3 P0A7S3 2 9 rpsL 30S ribosomal protein S12 yes yes 2 4.5372E-58 172.03 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3798900000 1104000000 1027100000 0 0 877380000 790420000 0 0 470 122 506 2772;2773;2774;2775;2776;2777;2778;2779 2001;2002;2003;2004;2005 2002 5 1114900000 1057700000 0 0 1059000000 877450000 0 0 ATVNQLVRKP ______________________________ ______________________________ M A T K P R 1 1 1 0 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 2 0 0 10 2 0 1 1124.6666 P0A7S3 P0A7S3 2 11 rpsL 30S ribosomal protein S12 yes yes 2;3 1.8154E-06 108.46 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 4 3 2001500000 103360000 100700000 0 0 1241400000 556080000 0 0 471 122 507 2780;2781;2782;2783;2784;2785;2786;2787;2788;2789;2790 2006;2007;2008;2009;2010;2011;2012 2012 6 623960000 602720000 0 0 1767300000 792690000 0 0 ATVNQLVRKPRARKVAKSNVPALE ______________________________ PRARKVAKSNVPALEACPQKRGVCTRVYTT M A T L E A 4 3 2 0 0 1 1 0 0 0 2 3 0 0 2 1 1 0 0 4 0 0 24 6 0 6 2644.5613 P0A7S3 P0A7S3 2 25 rpsL 30S ribosomal protein S12 yes yes 4;5 0.0012151 26.417 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 113550000 14539000 15430000 11688000 10953000 13802000 16366000 14968000 15800000 472 122 508 2791;2792;2793;2794;2795;2796;2797;2798;2799;2800;2801;2802;2803;2804;2805;2806 2013;2014;2015;2016;2017;2018;2019;2020;2021;2022;2023 2018 10 223380000 235320000 99308000 83042000 212500000 248040000 115190000 90676000 ATVSRPVSHQR IGELPEECVEEVRLRATVSRPVSHQRMGTP VRLRATVSRPVSHQRMGTPMVENDSGYKLG R A T Q R M 1 2 0 0 0 1 0 0 1 0 0 0 0 0 1 2 1 0 0 2 0 0 11 1 0 2 1236.6687 P03018 P03018 648 658 uvrD DNA helicase II yes yes 3 1.4053E-05 102.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32368000 9403000 17182000 0 0 2847400 2935500 0 0 473 41 509 2807;2808;2809;2810 2024;2025;2026;2027 2026 4 9403000 17588000 0 0 3434800 3251800 0 0 ATYALLAK RSVEQLRGIEGSRVRATYALLAKQYGVTWN IEGSRVRATYALLAKQYGVTWNGRRYDPKD R A T A K Q 3 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 1 0 1 0 0 0 8 0 0 3 849.496 Q46896 Q46896 147 154 ygbT CRISPR-associated endonuclease Cas1 yes yes 2 0.0024282 50.966 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 474 442 510 2811;2812 2028;2029 2028 71 0 0 0 0 0 0 0 0 0 AVAAGMNPMDLK TATVLAQAIITEGLKAVAAGMNPMDLKRGI GLKAVAAGMNPMDLKRGIDKAVTAAVEELK K A V L K R 3 0 1 1 0 0 0 1 0 0 1 1 2 0 1 0 0 0 0 1 0 0 12 0 0 4 1216.5944 P0A6F5 P0A6F5 106 117 groL 60 kDa chaperonin yes yes 2 1.9141E-35 148.94 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 1523900000 310290000 296730000 0 0 364090000 552850000 0 0 475 68 511;512;513 2813;2814;2815;2816;2817;2818;2819;2820;2821;2822;2823;2824 2030;2031;2032;2033;2034;2035;2036;2037;2038;2039 2037 76;77 10 310290000 303730000 0 0 439200000 612430000 0 0 AVAAGMNPMDLKR TATVLAQAIITEGLKAVAAGMNPMDLKRGI LKAVAAGMNPMDLKRGIDKAVTAAVEELKA K A V K R G 3 1 1 1 0 0 0 1 0 0 1 1 2 0 1 0 0 0 0 1 0 0 13 1 0 4 1372.6955 P0A6F5 P0A6F5 106 118 groL 60 kDa chaperonin yes yes 2;3 2.016E-21 134.99 By MS/MS By MS/MS By MS/MS 1 2 1 110880000 46970000 56098000 0 0 0 7809400 0 0 476 68 514 2825;2826;2827;2828 2040;2041;2042;2043;2044;2045 2040 6 46970000 57422000 0 0 0 8651100 0 0 AVAAMSVMDVVE ______________________________ IIEAVAAMSVMDVVELISAMEEKFGVSAAA E A V V E L 3 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 0 0 0 4 0 0 12 0 0 3 1220.5781 P0A7K2 P0A7K2 11 22 rplL 50S ribosomal protein L7/L12 yes yes 2 0.00017703 56.721 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 1 1 2 15461000 1242400 1545800 1381900 2506800 3451200 2526000 0 2806900 477 108 515;516 2829;2830;2831;2832;2833;2834;2835;2836;2837;2838 2046;2047;2048;2049 2048 119 4 19089000 23574000 11742000 19006000 53134000 38286000 0 16108000 AVADPWPGAFSYVGNQK LEWHKPASVLHNMVRAVADPWPGAFSYVGN ADPWPGAFSYVGNQKFTVWSSRVHPHASKA R A V Q K F 3 0 1 1 0 1 0 2 0 0 0 1 0 1 2 1 0 1 1 2 0 0 17 0 0 5 1805.8737 P77398 P77398 223 239 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 3.4579E-56 205.02 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 7067600000 1709900000 1931000000 0 0 1508200000 1918500000 0 0 478 432 517 2839;2840;2841;2842;2843;2844;2845;2846;2847 2050;2051;2052;2053;2054;2055;2056;2057;2058;2059;2060;2061 2053 12 1709900000 1976600000 0 0 1819400000 2125300000 0 0 AVAEQGYR ______________________________ LSPDILRAVAEQGYREPTPIQQQAIPAVLE R A V Y R E 2 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 8 0 1 2 892.44028 P25888 P25888 15 22 rhlE ATP-dependent RNA helicase RhlE yes yes 2 3.2953E-05 113.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60787000 17228000 17521000 0 0 14199000 11839000 0 0 479 318 518 2848;2849;2850;2851 2062;2063;2064;2065;2066 2062 5 17228000 17934000 0 0 17129000 13115000 0 0 AVAEQGYREPTPIQQQAIPAVLEGR ______________________________ TPIQQQAIPAVLEGRDLMASAQTGTGKTAG R A V G R D 4 2 0 0 0 4 3 2 0 2 1 0 0 0 3 0 1 0 1 2 0 0 25 1 3 7 2720.4246 P25888 P25888 15 39 rhlE ATP-dependent RNA helicase RhlE yes yes 3 6.8011E-287 248.58 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 717590000 169990000 180520000 0 0 204090000 162990000 0 0 480 318 519 2852;2853;2854;2855 2067;2068;2069;2070 2069 4 169990000 184790000 0 0 246200000 180550000 0 0 AVAIENLK LGSARFPEFRDENIRAVAIENLKKRGIDAL FRDENIRAVAIENLKKRGIDALVVIGGDGS R A V L K K 2 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 1 2 856.50182 P0A796 P0A796 84 91 pfkA ATP-dependent 6-phosphofructokinase isozyme 1 yes yes 2 0.0045764 62.717 By matching By matching By MS/MS By MS/MS 1 1 1 1 13808000 0 3439100 2939000 0 3388300 4042100 0 0 481 98 520 2856;2857;2858;2859 2071 2071 1 0 3520300 24972000 0 4087300 4477700 0 0 AVAKAGKPLLIIAE DKKISNIREMLPVLEAVAKAGKPLLIIAED EAVAKAGKPLLIIAEDVEGEALATLVVNTM E A V A E D 4 0 0 0 0 0 1 1 0 2 2 2 0 0 1 0 0 0 0 1 0 0 14 2 0 5 1392.8704 P0A6F5 P0A6F5 239 252 groL 60 kDa chaperonin yes yes 2;3 2.5325E-09 69.276 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 1391700000 51565000 37869000 313200000 256590000 14354000 16136000 299640000 402310000 482 68 521 2860;2861;2862;2863;2864;2865;2866;2867;2868;2869;2870;2871;2872;2873;2874;2875 2072;2073;2074;2075;2076;2077;2078;2079;2080;2081 2075 9 792280000 577510000 2661200000 1945300000 220990000 244570000 2306100000 2308800000 AVAKAGKPLLIIAEDVE DKKISNIREMLPVLEAVAKAGKPLLIIAED AKAGKPLLIIAEDVEGEALATLVVNTMRGI E A V V E G 4 0 0 1 0 0 2 1 0 2 2 2 0 0 1 0 0 0 0 2 0 0 17 2 1 5 1736.0084 P0A6F5 P0A6F5 239 255 groL 60 kDa chaperonin yes yes 2;3 1.6805E-15 100.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 2 2 144680000 2897200 2698400 30654000 45572000 2988400 3667000 18148000 38059000 483 68 522 2876;2877;2878;2879;2880;2881;2882;2883;2884;2885;2886;2887 2082;2083;2084;2085;2086 2082 5 44515000 41151000 260460000 345510000 46009000 55578000 139670000 218410000 AVAKAGKPLLIIAEDVEGE DKKISNIREMLPVLEAVAKAGKPLLIIAED AGKPLLIIAEDVEGEALATLVVNTMRGIVK E A V G E A 4 0 0 1 0 0 3 2 0 2 2 2 0 0 1 0 0 0 0 2 0 0 19 2 2 5 1922.0724 P0A6F5 P0A6F5 239 257 groL 60 kDa chaperonin yes yes 2;3 7.2943E-33 145.83 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 2 2 306920000 2490300 4051400 43842000 54375000 19564000 23068000 39139000 120390000 484 68 523 2888;2889;2890;2891;2892;2893;2894;2895;2896;2897;2898;2899 2087;2088;2089;2090;2091;2092;2093;2094 2089 8 38263000 61785000 372520000 412240000 301210000 349630000 301220000 690900000 AVALAFK AVSPYSDEVRQAMLKAVALAFKKMHSINRQ EVRQAMLKAVALAFKKMHSINRQHGCCYVR K A V F K K 3 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 0 0 3 718.43776 P27294 P27294 136 142 inaA Protein InaA yes yes 2 0.0033206 72.618 By MS/MS 1 25419000 25419000 0 0 0 0 0 0 0 485 321 524 2900 2095 2095 1 25419000 0 0 0 0 0 0 0 AVALLQMTPFAWRAKPE QSAELCYPMRLRGDEAVALLQMTPFAWRAK ALLQMTPFAWRAKPEVWQTLAAKEVFDCQT E A V P E V 4 1 0 0 0 1 1 0 0 0 2 1 1 1 2 0 1 1 0 1 0 0 17 2 0 6 1928.0342 P36999 P36999 227 243 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 3 0.00031982 43.791 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 18193000 0 328620 13543000 4013800 0 0 0 308170 486 352 525 2901;2902;2903;2904 2096 2096 287 0 0 5011500 115070000 30430000 0 0 0 1768500 AVAVDSGVTAVAK TLRADKPLVGTGMERAVAVDSGVTAVAKRG ERAVAVDSGVTAVAKRGGVVQYVDASRIVI R A V A K R 4 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 4 0 0 13 0 0 4 1186.6558 P0A8V2 P0A8V2 707 719 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 8.0762E-06 78.655 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41764000 8230000 9030900 0 0 8333100 16170000 0 0 487 154 526 2905;2906;2907;2908 2097;2098;2099;2100 2099 4 8230000 9244000 0 0 10052000 17913000 0 0 AVDGIEP RLGFAIAHALDNSAPAVDGIEPELQSKIDV HALDNSAPAVDGIEPELQSKIDVIVQALAG P A V E P E 1 0 0 1 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 7 0 1 1 699.34392 P33602 P33602 471 477 nuoG NADH-quinone oxidoreductase subunit G yes yes 1 0.010539 35.105 By matching By matching By MS/MS By matching 1 1 1 1 17616000 1566900 1449900 0 0 9078100 5520600 0 0 488 345 527 2909;2910;2911;2912 2101 2101 1 9458700 8677900 0 0 12924000 7869600 0 0 AVDKFEYR QFLDLIQEGNIGLMKAVDKFEYRRGYKFST GNIGLMKAVDKFEYRRGYKFSTYATWWIRQ K A V Y R R 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 8 1 1 1 1026.5134 P00579 P00579 415 422 rpoD RNA polymerase sigma factor RpoD yes yes 2 4.9843E-45 163.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 148150000 33600000 55221000 0 0 28521000 30806000 0 0 489 27 528 2913;2914;2915;2916 2102;2103;2104;2105;2106 2104 5 33600000 56525000 0 0 34405000 34126000 0 0 AVDSMIPIGR IERQSVDQPVQTGYKAVDSMIPIGRGQREL QTGYKAVDSMIPIGRGQRELIIGDRQTGKT K A V G R G 1 1 0 1 0 0 0 1 0 2 0 0 1 0 1 1 0 0 0 1 0 0 10 0 0 2 1057.559 P0ABB0 P0ABB0 152 161 atpA ATP synthase subunit alpha yes yes 2 0.0005238 82.452 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39208000 9839800 9255500 0 0 12585000 7527100 0 0 490 193 529 2917;2918;2919;2920 2107 2107 1 9839800 9474000 0 0 15182000 8338300 0 0 AVEDLVNTQIR FDFSHNEAMKPEEIRAVEDLVNTQIRRNLP EEIRAVEDLVNTQIRRNLPIETNIMDLEAA R A V I R R 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 0 1 0 0 2 0 0 11 0 1 1 1256.6725 P00957 P00957 611 621 alaS Alanine--tRNA ligase yes yes 2 2.6709E-17 133.13 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27735000 7852500 8224400 0 0 4404900 7253600 0 0 491 33 530 2921;2922;2923;2924 2108;2109;2110;2111 2109 4 7852500 8418500 0 0 5313600 8035400 0 0 AVEELKA NPMDLKRGIDKAVTAAVEELKALSVPCSDS GIDKAVTAAVEELKALSVPCSDSKAIAQVG A A V K A L 2 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 1 2 1 758.41742 P0A6F5 P0A6F5 127 133 groL 60 kDa chaperonin yes yes 2 0.0014093 73.039 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 1 139500000 26437000 19032000 2735300 4999500 18699000 64882000 0 2717000 492 68 531 2925;2926;2927;2928;2929;2930;2931;2932;2933;2934 2112;2113 2112 1 194750000 146040000 23241000 37904000 287890000 380530000 0 15593000 AVEGGLHQIETA VDVIDSQSASKLIPAAVEGGLHQIETASGA IPAAVEGGLHQIETASGAVLKARSIIVATG A A V T A S 2 0 0 0 0 1 2 2 1 1 1 0 0 0 0 0 1 0 0 1 0 0 12 0 2 1 1223.6146 P35340 P35340 297 308 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.0044005 53.327 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15127000 1454500 2212700 0 0 5532600 5927000 0 0 493 348 532 2935;2936;2937;2938 2114 2114 1 8780400 13243000 0 0 7876700 8449000 0 0 AVEMMQAHK ALEIPADTFREQLPKAVEMMQAHKDKKIVM REQLPKAVEMMQAHKDKKIVMYCTGGIRCE K A V H K D 2 0 0 0 0 1 1 0 1 0 0 1 2 0 0 0 0 0 0 1 0 0 9 0 1 2 1043.4892 P24188 P24188 184 192 yceA UPF0176 protein YceA yes yes 2 0.002853 66.682 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 9806200 3092000 3041700 0 0 1839600 1832900 0 0 494 310 533 2939;2940;2941;2942 2115;2116 2115 2 3092000 3113500 0 0 2219100 2030500 0 0 AVESGDKKPLR KGPFIDLHLLKKVEKAVESGDKKPLRTWSR KVEKAVESGDKKPLRTWSRRSTIFPNMIGL K A V L R T 1 1 0 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 11 2 1 2 1198.667 P0A7U3 P0A7U3 22 32 rpsS 30S ribosomal protein S19 yes yes 2;3 1.2188E-05 99.802 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 218360000 80189000 83548000 0 0 33266000 21361000 0 0 495 126 534 2943;2944;2945;2946;2947;2948;2949;2950 2117;2118;2119;2120;2121;2122 2122 6 80189000 85520000 0 0 40129000 23663000 0 0 AVETLILDEADR GRLLQYIKEENFDCRAVETLILDEADRMLD DCRAVETLILDEADRMLDMGFAQDIEHIAG R A V D R M 2 1 0 2 0 0 2 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 2 2 1343.6933 P21507 P21507 150 161 srmB ATP-dependent RNA helicase SrmB yes yes 2 0.02199 42.21 By MS/MS By matching 1 1 5184200 0 2676500 0 0 2507700 0 0 0 496 296 535 2951;2952 2123 2123 0 0 2739600 0 0 3025000 0 0 0 AVGLHYFSK EIYNKDGNKVDLYGKAVGLHYFSKGNGENS VDLYGKAVGLHYFSKGNGENSYGGNGDMTY K A V S K G 1 0 0 0 0 0 0 1 1 0 1 1 0 1 0 1 0 0 1 1 0 0 9 0 0 1 1020.5393 P02931 P02931 39 47 ompF Outer membrane protein F yes yes 2 2.165E-27 151.04 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 35002000 5547500 5286400 0 0 10612000 13555000 0 0 497 38 536 2953;2954;2955;2956 2124;2125;2126 2126 3 5547500 5411200 0 0 12802000 15016000 0 0 AVIARYRHDYP IRIYASSTIGNYILPAVIARYRHDYPQLPI YILPAVIARYRHDYPQLPIELSVGNSQDVM P A V Y P Q 2 2 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 2 1 0 0 11 2 0 2 1359.7048 P0ACR4 P0ACR4 106 116 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 3 0.0035963 58.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 73673000 4627000 2989500 0 0 40765000 25292000 0 0 498 218 537 2957;2958;2959;2960;2961;2962;2963 2127 2127 1 14762000 12476000 0 0 58036000 35639000 0 0 AVIESENSAERDQLLENLQEGMEVK IKLDQKRNNVVVSRRAVIESENSAERDQLL RDQLLENLQEGMEVKGIVKNLTDYGAFVDL R A V V K G 2 1 2 1 0 2 6 1 0 1 3 1 1 0 0 2 0 0 0 2 0 0 25 1 6 2 2830.3655 P0AG67 P0AG67 172 196 rpsA 30S ribosomal protein S1 yes yes 3 1.9852E-23 91.729 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33405000 9326200 7166300 0 0 9863700 7048600 0 0 499 261 538 2964;2965;2966;2967 2128;2129;2130;2131 2128 4 9326200 7335400 0 0 11899000 7808200 0 0 AVILNAGIK ATTLGKRLAQHPYDRAVILNAGIKVSGDRH QHPYDRAVILNAGIKVSGDRHEYLIPFNQL R A V I K V 2 0 1 0 0 0 0 1 0 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 0 2 897.56475 P15038 P15038 20 28 helD Helicase IV yes yes 2 0.00097709 90.777 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 99477000 23634000 24111000 0 0 19439000 32294000 0 0 500 281 539 2968;2969;2970;2971 2132;2133;2134;2135 2135 4 23634000 24680000 0 0 23449000 35774000 0 0 AVITGDVTQIDLPR EQMKMFLTRIGFNSKAVITGDVTQIDLPRN KAVITGDVTQIDLPRNTKSGLRHAIEVLAD K A V P R N 1 1 0 2 0 1 0 1 0 2 1 0 0 0 1 0 2 0 0 2 0 0 14 0 0 2 1496.8199 P0A9K3 P0A9K3 265 278 ybeZ PhoH-like protein yes yes 2 9.6896E-24 134.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 55368000 11279000 1927300 0 0 23157000 19005000 0 0 501 168 540 2972;2973;2974;2975;2976;2977;2978 2136;2137;2138 2136 3 21908000 11535000 0 0 31341000 24848000 0 0 AVITVPAYFNDAQRQATKDAGRIAGLE MKKTAEDYLGEPVTEAVITVPAYFNDAQRQ QRQATKDAGRIAGLEVKRIINEPTAAALAY E A V L E V 6 2 1 2 0 2 1 2 0 2 1 1 0 1 1 0 2 0 1 2 0 0 27 3 0 7 2874.4988 P0A6Y8 P0A6Y8 138 164 dnaK Chaperone protein DnaK yes yes 3;4 4.5312E-79 145.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 2 1080000000 3300000 4313200 0 0 529650000 542700000 0 0 502 86 541 2979;2980;2981;2982;2983;2984;2985;2986 2139;2140;2141;2142;2143;2144;2145;2146 2139 8 50704000 65777000 0 0 8154400000 8225400000 0 0 AVKPLADVQE GDRAFVLRISEHKPEAVKPLADVQEQVKAL EHKPEAVKPLADVQEQVKALVQHNKAEQQA E A V Q E Q 2 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 10 1 0 3 1068.5815 P0ADY1 P0ADY1 475 484 ppiD Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.021327 41.429 By matching By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 1 21043000 0 1166500 3558300 3374100 457570 610680 5938200 5937700 503 227 542 2987;2988;2989;2990;2991;2992;2993 2147 2147 1 0 17789000 30235000 25581000 7044700 9255700 45702000 34076000 AVLAKAKVTE MDNMRNVALEEQAVEAVLAKAKVTEKETTF EQAVEAVLAKAKVTEKETTFNELMNQQA__ E A V T E K 3 0 0 0 0 0 1 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 10 2 0 3 1028.623 P0A850 P0A850 410 419 tig Trigger factor yes yes 2 2.8499E-13 131.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 229560000 42103000 29343000 29258000 39591000 10924000 10764000 33578000 34001000 504 137 543 2994;2995;2996;2997;2998;2999;3000;3001 2148;2149;2150;2151;2152;2153;2154;2155 2149 8 646900000 447490000 248600000 300160000 168180000 163140000 258420000 195130000 AVLAKAKVTEKE MDNMRNVALEEQAVEAVLAKAKVTEKETTF AVEAVLAKAKVTEKETTFNELMNQQA____ E A V K E T 3 0 0 0 0 0 2 0 0 0 1 3 0 0 0 0 1 0 0 2 0 0 12 3 1 3 1285.7606 P0A850 P0A850 410 421 tig Trigger factor yes yes 2;3 0.0047325 44.318 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 2 1 2 150490000 2890900 6548800 16073000 23561000 16242000 22314000 24579000 38286000 505 137 544 3002;3003;3004;3005;3006;3007;3008;3009;3010;3011;3012;3013 2156;2157;2158;2159 2158 4 44418000 99869000 136570000 178630000 250060000 338200000 189170000 219720000 AVLEGRDLMA QGYREPTPIQQQAIPAVLEGRDLMASAQTG QQAIPAVLEGRDLMASAQTGTGKTAGFTLP P A V M A S 2 1 0 1 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 1 0 0 10 1 1 1 1073.5539 P25888 P25888 34 43 rhlE ATP-dependent RNA helicase RhlE yes yes 2 0.001272 70.919 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 56217000 2236900 2825500 17868000 18647000 8601800 6037400 0 0 506 318 545;546 3014;3015;3016;3017;3018;3019;3020;3021;3022;3023 2160;2161;2162;2163;2164;2165 2165 264 5 13503000 16910000 151820000 141370000 12246000 8606300 0 0 AVLEVAGVHNVLAK PASEGTGIIAGGAMRAVLEVAGVHNVLAKA RAVLEVAGVHNVLAKAYGSTNPINVVRATI R A V A K A 3 0 1 0 0 0 1 1 1 0 2 1 0 0 0 0 0 0 0 4 0 0 14 0 1 3 1418.8245 P0A7W1 P0A7W1 113 126 rpsE 30S ribosomal protein S5 yes yes 2;3 5.51E-63 197.73 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 176540000 47104000 42936000 0 0 41349000 45153000 0 0 507 131 547 3024;3025;3026;3027;3028;3029;3030;3031 2166;2167;2168;2169;2170;2171;2172;2173 2170 8 47104000 43950000 0 0 49879000 50019000 0 0 AVLEVITP AKGVQLHNEKDLTKPAVLEVITPTQVRLTI EKDLTKPAVLEVITPTQVRLTISEGRYHQV P A V T P T 1 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 2 0 0 8 0 1 1 840.49567 P0AA43 P0AA43 164 171 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 1 0.017827 33.358 By matching By MS/MS By matching By MS/MS 1 1 1 1 83638000 9860500 11420000 0 0 40863000 21493000 0 0 508 183 548 3032;3033;3034;3035 2174;2175 2175 1 59523000 68351000 0 0 58177000 30639000 0 0 AVLVAGGVEAEKLDK EELQILEAGLFSRIRAVLVAGGVEAEKLDK AVLVAGGVEAEKLDKLPRDRWLELGLTDEE R A V D K L 3 0 0 1 0 0 2 2 0 0 2 2 0 0 0 0 0 0 0 3 0 0 15 1 2 3 1497.8403 P0A8V2 P0A8V2 977 991 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.0071486 43.184 By MS/MS By matching By matching By MS/MS 1 1 1 1 22830000 5102000 4469600 0 0 5037800 8220100 0 0 509 154 549 3036;3037;3038;3039 2176;2177 2177 2 5102000 4575100 0 0 6077200 9106100 0 0 AVPLPLR LGIDFQSDAQHVTIRAVPLPLRQQNLQILI DAQHVTIRAVPLPLRQQNLQILIPELIGYL R A V L R Q 1 1 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 1 0 0 7 0 0 3 764.49086 P23367 P23367 525 531 mutL DNA mismatch repair protein MutL yes yes 2 0.0045645 64.563 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30774000 7731600 6194600 0 0 5983500 10864000 0 0 510 302 550 3040;3041;3042;3043 2178;2179;2180;2181 2181 4 7731600 6340800 0 0 7217900 12035000 0 0 AVQFVPP VLCTLPLGVLKQQPPAVQFVPPLPEWKTSA GVLKQQPPAVQFVPPLPEWKTSAVQRMGFG P A V P P L 1 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 0 2 0 0 7 0 0 2 756.41703 LSD1-FL-His LSD1-FL-His 638 644 yes yes 1 0.009789 80.498 By matching By MS/MS By matching By MS/MS 1 1 1 1 167250000 27348000 25787000 0 0 84862000 29250000 0 0 511 24 551 3044;3045;3046;3047 2182 2182 0 165090000 154330000 0 0 120820000 41696000 0 0 AVQNAMR SQLERRVMFRRAMKRAVQNAMRLGAKGIKV MFRRAMKRAVQNAMRLGAKGIKVEVSGRLG R A V M R L 2 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 7 0 0 2 788.39631 P0A7V3 P0A7V3 137 143 rpsC 30S ribosomal protein S3 yes yes 2 2.0638E-11 98.03 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 13212000 6488300 5902300 0 0 101250 719890 0 0 512 129 552 3048;3049;3050;3051 2183;2184 2183 1 6488300 6041600 0 0 122140 797470 0 0 AVSIDVRNMP LPDLARTLADREISAAVSIDVRNMPESPEI REISAAVSIDVRNMPESPEIFEQAMSNLPD A A V M P E 1 1 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 2 0 0 10 1 0 1 1100.5648 P0A894 P0A894 52 61 rapZ RNase adapter protein RapZ yes yes 2 0.019659 36.557 By MS/MS By MS/MS 1 1 7566100 0 0 0 0 4848200 2717900 0 0 513 141 553 3052;3053 2185 2185 1 0 0 0 0 6902200 3874400 0 0 AVTAAVEELK AAGMNPMDLKRGIDKAVTAAVEELKALSVP RGIDKAVTAAVEELKALSVPCSDSKAIAQV K A V L K A 3 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 2 3 1029.5706 P0A6F5 P0A6F5 123 132 groL 60 kDa chaperonin yes yes 2 1.6914E-38 161.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1696600000 542300000 0 0 0 499390000 654890000 0 0 514 68 554 3054;3055;3056;3057 2186;2187;2188;2189 2186 4 542300000 0 0 0 602410000 725470000 0 0 AVTKLVLVRHGE ______________________________ ______________________________ M A V G E S 1 1 0 0 0 0 1 1 1 0 2 1 0 0 0 0 1 0 0 3 0 0 12 2 0 1 1320.7878 P62707 P62707 2 13 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase yes yes 3 4.1781E-06 80.469 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 70369000 3704500 3326200 11237000 13341000 3691900 2839000 15252000 16977000 515 390 555 3058;3059;3060;3061;3062;3063;3064;3065 2190;2191;2192;2193;2194;2195 2195 4 56919000 50725000 95478000 101140000 56841000 43029000 117390000 97429000 AVTLYLGAVAATVR DGVDFVIPGNDDAIRAVTLYLGAVAATVRE RAVTLYLGAVAATVREGRSQDLASQAEESF R A V V R E 4 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 2 0 1 3 0 0 14 0 0 4 1403.8136 P0A7V0 P0A7V0 209 222 rpsB 30S ribosomal protein S2 yes yes 2 0.012193 40.727 By matching By matching By MS/MS By matching 1 1 1 1 12089000 1908300 2193500 0 0 3282500 4704700 0 0 516 128 556 3066;3067;3068;3069 2196 2196 1 1908300 2245300 0 0 3959700 5211800 0 0 AVTVQPPRPKPWEK CADNKPVAPKKQEAKAVTVQPPRPKPWEKT KAVTVQPPRPKPWEKTYVLLPSFEKVKGDK K A V E K T 1 1 0 0 0 1 1 0 0 0 0 2 0 0 4 0 1 1 0 2 0 0 14 2 1 5 1631.9148 Q46861 Q46861 276 289 ygiQ UPF0313 protein YgiQ yes yes 4 0.015932 23.008 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29664000 8179800 10280000 0 0 5287500 5916400 0 0 517 441 557 3070;3071;3072;3073 2197;2198 2197 2 8179800 10523000 0 0 6378400 6554100 0 0 AVVERLEYDPNRSA AYRIVDFKRNKDGIPAVVERLEYDPNRSAN PAVVERLEYDPNRSANIALVLYKDGERRYI P A V S A N 2 2 1 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 14 2 2 2 1617.8111 P60422 P60422 76 89 rplB 50S ribosomal protein L2 yes yes 2;3 1.0284E-47 153.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 1321000000 186450000 235530000 0 0 487360000 411660000 0 0 518 379 558;559 3074;3075;3076;3077;3078;3079;3080;3081;3082;3083 2199;2200;2201;2202;2203;2204;2205;2206;2207;2208 2204 30 9 1125500000 1409700000 0 0 693850000 586810000 0 0 AVVESIQR TKPELELTLKYFQGKAVVESIQRVSRPGLR LKYFQGKAVVESIQRVSRPGLRIYKRKDEL K A V Q R V 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 8 0 1 1 900.50288 P0A7W7 P0A7W7 70 77 rpsH 30S ribosomal protein S8 yes yes 2 0.0013437 94.262 By MS/MS By MS/MS By MS/MS 1 1 2 30258000 0 9155700 0 0 8937100 12165000 0 0 519 132 560 3084;3085;3086;3087 2209;2210;2211 2210 3 0 9371800 0 0 10781000 54347000 0 0 AVVEVLDSEPVFTHSVWR VSVSDASELPLNELKAVVEVLDSEPVFTHS EVLDSEPVFTHSVWRLLLWAADYYHHPIGD K A V W R L 1 1 0 1 0 0 2 0 1 0 1 0 0 1 1 2 1 1 0 5 0 0 18 0 2 2 2069.0582 P17888 P17888 62 79 priA Primosomal protein N yes yes 3 0.00017843 41.348 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 3 3 1 1 124950000 50392000 13759000 8600200 7190000 21389000 20778000 1671400 1168000 520 290 561 3088;3089;3090;3091;3092;3093;3094;3095;3096;3097;3098;3099;3100;3101;3102 2212;2213 2213 2 251110000 159530000 73075000 54511000 152810000 134760000 12864000 6703100 AVVLATGGASK VWNRNKETVETCHAKAVVLATGGASKVYQY CHAKAVVLATGGASKVYQYTTNPDISSGDG K A V S K V 3 0 0 0 0 0 0 2 0 0 1 1 0 0 0 1 1 0 0 2 0 0 11 0 0 3 972.5604 P10902 P10902 199 209 nadB L-aspartate oxidase yes yes 2 1.9364E-05 101.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 103980000 36382000 2912900 0 0 34031000 30650000 0 0 521 274 562 3103;3104;3105;3106 2214;2215;2216 2214 3 36382000 2981700 0 0 41051000 33954000 0 0 AVVNGEHSLLVLAGAGSGK FRQVESSPLNPAQARAVVNGEHSLLVLAGA GEHSLLVLAGAGSGKTSVLVARAGWLLARG R A V G K T 3 0 1 0 0 0 1 4 1 0 3 1 0 0 0 2 0 0 0 3 0 0 19 0 1 3 1777.9686 P15038 P15038 204 222 helD Helicase IV yes yes 3 0.001518 36.805 By MS/MS 1 0 0 0 0 0 0 0 0 0 522 281 563 3107 2217 2217 1 0 0 0 0 0 0 0 0 AVVNKPAVLLADEPTGNLDDALSEGILR IQLSGGEQQRVGIARAVVNKPAVLLADEPT PTGNLDDALSEGILRLFEEFNRVGVTVLMA R A V L R L 4 1 2 3 0 0 2 2 0 1 5 1 0 0 2 1 1 0 0 3 0 0 28 1 2 6 2889.5448 P0A9R7 P0A9R7 151 178 ftsE Cell division ATP-binding protein FtsE yes yes 3 5.0941E-156 191.18 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 439640000 93444000 129270000 0 0 83631000 133290000 0 0 523 174 564 3108;3109;3110;3111 2218;2219;2220;2221 2219 4 93444000 132330000 0 0 100880000 147650000 0 0 AWFIQSVTPR ACQALFQSRPEAIVRAWFIQSVTPRFKEAL EAIVRAWFIQSVTPRFKEALRWMAANRKAY R A W P R F 1 1 0 0 0 1 0 0 0 1 0 0 0 1 1 1 1 1 0 1 0 0 10 0 0 2 1203.64 P0AGJ5 P0AGJ5 130 139 yfiF Uncharacterized tRNA/rRNA methyltransferase YfiF yes yes 2 0.0064783 39.022 By MS/MS 1 0 0 0 0 0 0 0 0 0 524 265 565 3112 2222 2222 1 0 0 0 0 0 0 0 0 AWHSSSETIAK VDVYAVSTDTHFTHKAWHSSSETIAKIKYA FTHKAWHSSSETIAKIKYAMIGDPTGALTR K A W A K I 2 0 0 0 0 0 1 0 1 1 0 1 0 0 0 3 1 1 0 0 0 0 11 0 1 2 1215.5884 P0AE08 P0AE08 81 91 ahpC Alkyl hydroperoxide reductase subunit C yes yes 3 0.012951 38.875 By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 1 1 168700000 49630000 58433000 0 0 24333000 34622000 0 1680400 525 233 566 3113;3114;3115;3116;3117;3118 2223;2224 2224 0 49630000 59812000 0 0 39846000 38354000 0 9643700 AYAAGELKHGPLALIDADMPVIVVAPNNE EGALKLKEISYIHAEAYAAGELKHGPLALI IDADMPVIVVAPNNELLEKLKSNIEEVRAR E A Y N E L 6 0 2 2 0 0 2 2 1 2 3 1 1 0 3 0 0 0 1 3 0 0 29 1 1 9 2987.5426 P17169 P17169 497 525 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 4.9509E-158 187.21 By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 855830000 904800 661340 0 0 357260000 497000000 0 0 526 288 567;568 3119;3120;3121;3122;3123;3124 2225;2226;2227;2228 2227 240 4 13902000 10086000 0 0 5500400000 7532800000 0 0 AYAAGELKHGPLALIDADMPVIVVAPNNELLE EGALKLKEISYIHAEAYAAGELKHGPLALI DMPVIVVAPNNELLEKLKSNIEEVRARGGQ E A Y L E K 6 0 2 2 0 0 3 2 1 2 5 1 1 0 3 0 0 0 1 3 0 0 32 1 2 9 3342.7534 P17169 P17169 497 528 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 1.9946E-08 68.101 By MS/MS By MS/MS 1 1 61014000 0 0 0 0 29500000 31514000 0 0 527 288 569 3125;3126 2229;2230 2229 2 0 0 0 0 454180000 477650000 0 0 AYEVLTDSQKRAAYDQYGHAAFE QGDKEAEAKFKEIKEAYEVLTDSQKRAAYD QKRAAYDQYGHAAFEQGGMGGGGFGGGADF E A Y F E Q 5 1 0 2 0 2 2 1 1 0 1 1 0 1 0 1 1 0 3 1 0 0 23 2 1 5 2632.2194 P08622 P08622 53 75 dnaJ Chaperone protein DnaJ yes yes 4 0.021289 13.321 By MS/MS 1 2318800 0 0 0 0 0 2318800 0 0 528 61 570 3127 2231 2231 1 0 0 0 0 0 35145000 0 0 AYGQFEPPALYDHVVK QYLAARLAIFHLRKKAYGQFEPPALYDHVV YGQFEPPALYDHVVKMVEMGKYDNHLLEDY K A Y V K M 2 0 0 1 0 1 1 1 1 0 1 1 0 1 2 0 0 0 2 2 0 0 16 0 1 4 1832.9097 P00452;P00452-2 P00452 93 108 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 3 0.00091744 44.807 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20355000 4541700 4304800 0 0 4882000 6626400 0 0 529 26 571 3128;3129;3130;3131 2232;2233;2234 2233 3 4541700 4406400 0 0 5889200 7340600 0 0 AYGSTNPINVVR RAVLEVAGVHNVLAKAYGSTNPINVVRATI LAKAYGSTNPINVVRATIDGLENMNSPEMV K A Y V R A 1 1 2 0 0 0 0 1 0 1 0 0 0 0 1 1 1 0 1 2 0 0 12 0 0 2 1289.6728 P0A7W1 P0A7W1 127 138 rpsE 30S ribosomal protein S5 yes yes 2 1.2639E-36 153.24 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 95971000 26622000 21737000 0 0 22206000 25406000 0 0 530 131 572 3132;3133;3134;3135 2235;2236;2237;2238 2236 4 26622000 22250000 0 0 26787000 28144000 0 0 AYHVVDEAELTK PRFKEALRWMAANRKAYHVVDEAELTKASG NRKAYHVVDEAELTKASGTEHHGGVCFLIK K A Y T K A 2 0 0 1 0 0 2 0 1 0 1 1 0 0 0 0 1 0 1 2 0 0 12 0 2 2 1373.6827 P0AGJ5 P0AGJ5 153 164 yfiF Uncharacterized tRNA/rRNA methyltransferase YfiF yes yes 3 0.0076733 23.049 By matching By MS/MS 1 1 8759800 0 0 0 0 3236700 5523100 0 0 531 265 573 3136;3137 2239 2239 1 0 0 0 0 3904400 6118300 0 0 AYNTVVPASGK KDVIILLDSITRLARAYNTVVPASGKVLTG RLARAYNTVVPASGKVLTGGVDANALHRPK R A Y G K V 2 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 1 2 0 0 11 0 0 3 1105.5768 P0AG30 P0AG30 273 283 rho Transcription termination factor Rho yes yes 2 5.8228E-06 72.643 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13218000 0 5245000 0 0 3584500 4388200 0 0 532 256 574 3138;3139;3140;3141 2240;2241;2242;2243 2240 4 0 5368800 0 0 4324000 4861100 0 0 AYRVAALNGLNRLF EYFVNTTFNYPTMAEAYRVAALNGLNRLF_ EAYRVAALNGLNRLF_______________ E A Y L F - 3 2 2 0 0 0 0 1 0 0 3 0 0 1 0 0 0 0 1 1 0 0 14 2 0 3 1576.8838 P27306 P27306 453 466 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 0.012995 25.178 By MS/MS 1 0 0 0 0 0 0 0 0 0 533 323 575 3142 2244 2244 1 0 0 0 0 0 0 0 0 AYTPAEWAR MEYIADNRIHAVSIKAYTPAEWARDRKLNG HAVSIKAYTPAEWARDRKLNGF________ K A Y A R D 3 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 9 0 1 4 1063.5087 P0A9W6 P0A9W6 69 77 ibaG Acid stress protein IbaG yes yes 2 2.2786E-06 109.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 297020000 93235000 75150000 0 0 66472000 62163000 0 0 534 178 576 3143;3144;3145;3146 2245;2246;2247;2248 2248 4 93235000 76923000 0 0 80185000 68862000 0 0 CALDISGRPHLEYK CRFGFVLPMDECLARCALDISGRPHLEYKA RCALDISGRPHLEYKAEFTYQRVGDLSTEM R C A Y K A 1 1 0 1 1 0 1 1 1 1 2 1 0 0 1 1 0 0 1 0 0 0 14 1 1 2 1657.8246 P06987 P06987 269 282 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3;4 0.00061819 59.185 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 68313000 18742000 17810000 0 0 10882000 20878000 0 0 535 55 577 3147;3148;3149;3150;3151;3152;3153;3154 2249;2250;2251;2252;2253 2251 5 18742000 18231000 0 0 13126000 23129000 0 0 CDAVLCTLPLGVLK IAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ KCDAVLCTLPLGVLKQQPPAVQFVPPLPEW K C D L K Q 1 0 0 1 2 0 0 1 0 0 4 1 0 0 1 0 1 0 0 2 0 0 14 0 0 2 1557.8259 LSD1-FL-His LSD1-FL-His 620 633 yes yes 2 1.3801E-26 168.69 By MS/MS By MS/MS By MS/MS 1 1 2 298380000 178760000 0 0 0 97412000 22208000 0 0 536 24 578 3155;3156;3157;3158 2254;2255;2256;2257 2257 4 178760000 0 0 0 117510000 24601000 0 0 CDCRKPKVKLVE QFDEVLICPHLPADECDCRKPKVKLVERYL ADECDCRKPKVKLVERYLAEQAMDRANSYV E C D V E R 0 1 0 1 2 0 1 0 0 0 1 3 0 0 1 0 0 0 0 2 0 0 12 4 0 1 1530.8011 P06987 P06987 101 112 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 4 0.0027974 39.148 By MS/MS By MS/MS 1 1 9819500 0 0 3349500 6470000 0 0 0 0 537 55 579 3159;3160 2258;2259 2259 2 0 0 28460000 49053000 0 0 0 0 CDVVLPLVAIATPIEYTR DISIHSEWIEYHVKKCDVVLPLVAIATPIE VLPLVAIATPIEYTRNPLRVFELDFEENLR K C D T R N 2 1 0 1 1 0 1 0 0 2 2 0 0 0 2 0 2 0 1 3 0 0 18 0 1 4 2029.0918 P77398 P77398 383 400 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 9.2107E-44 142.85 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 699740000 114230000 133530000 0 0 144840000 307140000 0 0 538 432 580 3161;3162;3163;3164;3165;3166;3167;3168;3169;3170;3171;3172 2260;2261;2262;2263;2264 2260 5 114230000 136680000 0 0 174720000 340240000 0 0 CFTDIRDGIEALYR EGSPIKLIDGGKQKRCFTDIRDGIEALYRI RCFTDIRDGIEALYRIIENAGNRCDGEIIN R C F Y R I 1 2 0 2 1 0 1 1 0 2 1 0 0 1 0 0 1 0 1 0 0 0 14 1 1 1 1727.8301 P77398 P77398 536 549 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 2.7716E-63 190.15 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 483530000 148540000 129180000 0 0 78633000 127180000 0 0 539 432 581 3173;3174;3175;3176;3177;3178;3179;3180 2265;2266;2267;2268;2269;2270;2271;2272;2273 2272 9 148540000 132230000 0 0 94855000 140890000 0 0 CGIVGAIAQR ______________________________ ______________________________ M C G Q R D 2 1 0 0 1 1 0 2 0 2 0 0 0 0 0 0 0 0 0 1 0 0 10 0 0 2 1043.5546 P17169 P17169 2 11 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.8666E-05 103.91 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 112730000 16927000 17775000 0 0 29129000 48899000 0 0 540 288 582 3181;3182;3183;3184;3185 2274;2275;2276;2277 2277 4 16927000 18195000 0 0 35139000 54169000 0 0 CGIVGAIAQRDVAE ______________________________ MCGIVGAIAQRDVAEILLEGLRRLEYRGYD M C G A E I 3 1 0 1 1 1 1 2 0 2 0 0 0 0 0 0 0 0 0 2 0 0 14 1 0 3 1457.7297 P17169 P17169 2 15 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.0877E-14 91.855 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 102050000 5663500 5191200 27067000 30108000 10443000 6319900 6896100 10365000 541 288 583 3186;3187;3188;3189;3190;3191;3192;3193 2278;2279;2280;2281;2282;2283;2284;2285;2286;2287 2287 10 87018000 79166000 229980000 228270000 160780000 95788000 53074000 59481000 CIGIVGHPR ______________________________ MNNHFKCIGIVGHPRHPTALTTHEMLYRWL K C I P R H 0 1 0 0 1 0 0 2 1 2 0 0 0 0 1 0 0 0 0 1 0 0 9 0 0 1 1007.5335 P0A7B3 P0A7B3 7 15 nadK NAD kinase yes yes 2 0.0006564 94.407 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13321000 4640000 4185800 0 0 1936600 2559100 0 0 542 99 584 3194;3195;3196;3197 2288;2289;2290;2291 2289 4 4640000 4284600 0 0 2336100 2834900 0 0 CKIEQAPGQHGAR TDLFLKSGVRAIDTKCKIEQAPGQHGARKP TKCKIEQAPGQHGARKPRLSDYGVQLREKQ K C K A R K 2 1 0 0 1 2 1 2 1 1 0 1 0 0 1 0 0 0 0 0 0 0 13 1 1 3 1450.7099 P0A7V8 P0A7V8 32 44 rpsD 30S ribosomal protein S4 yes yes 3;4 7.6084E-08 92.19 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 75636000 24842000 34067000 0 0 7350800 9375700 0 0 543 130 585 3198;3199;3200;3201;3202;3203;3204;3205 2292;2293;2294;2295;2296;2297;2298;2299;2300 2292 6 24842000 34872000 0 0 8867300 10386000 0 0 CLDWEPK QDVEHRKPSIRNAHRCLDWEPKIDMQETID PSIRNAHRCLDWEPKIDMQETIDETLDFFL R C L P K I 0 0 0 1 1 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 7 0 1 1 946.42185 P77398 P77398 629 635 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 1.1985E-35 162.51 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 496680000 131780000 142610000 0 0 97743000 124550000 0 0 544 432 586 3206;3207;3208;3209 2301;2302;2303;2304 2302 4 131780000 145970000 0 0 117910000 137970000 0 0 CLVILSR ATKCVTNFREKNRDRCLVILSRNDEALNSQ FREKNRDRCLVILSRNDEALNSQRTSEELH R C L S R N 0 1 0 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 7 0 0 0 859.49496 P0A8E1 P0A8E1 127 133 ycfP UPF0227 protein YcfP yes yes 2 0.0032043 73.637 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44431000 12214000 8558900 0 0 15566000 8091400 0 0 545 143 587 3210;3211;3212;3213 2305;2306;2307;2308 2305 4 12214000 8760900 0 0 18778000 8963400 0 0 CPLYEANGQAVPK VSKQVNMELAKIKQKCPLYEANGQAVPKEK QKCPLYEANGQAVPKEKDEMVEQEFNRLLE K C P P K E 2 0 1 0 1 1 1 1 0 0 1 1 0 0 2 0 0 0 1 1 0 0 13 0 1 4 1445.6973 LSD1-FL-His LSD1-FL-His 362 374 yes yes 2 2.2735E-264 260.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1184300000 311420000 354790000 0 0 250680000 267420000 0 0 546 24 588 3214;3215;3216;3217 2309;2310;2311;2312 2310 4 311420000 363170000 0 0 302400000 296250000 0 0 CPQINLIDR LMHGTEGEVYANPQRCPQINLIDREGMRVL YANPQRCPQINLIDREGMRVLYEKQDTAGS R C P D R E 0 1 1 1 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 9 0 0 1 1127.5757 P30177 P30177 239 247 ybiB Uncharacterized protein YbiB yes yes 2 1.257E-05 80.438 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9424700 0 0 0 0 5398700 4026000 0 0 547 332 589 3218;3219;3220;3221 2313;2314;2315;2316 2313 4 0 0 0 0 6512500 4459900 0 0 CSLADFQIEK PPPDPQRLPNTLSFRCSLADFQIEKKIGRG TLSFRCSLADFQIEKKIGRGQFSEVYKATC R C S E K K 1 0 0 1 1 1 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1 1 1209.57 GST-Nek6 GST-Nek6 271 280 yes yes 2 0.00014722 96.331 By MS/MS By MS/MS 1 1 20452000 0 0 0 0 10857000 9595300 0 0 548 23 590 3222;3223 2317;2318 2317 2 0 0 0 0 13096000 10629000 0 0 DAAKIVQE ATEMGADLAINSHTEDAAKIVQEKTGGAHA AINSHTEDAAKIVQEKTGGAHAAVVTAVAK E D A Q E K 2 0 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 8 1 0 2 872.46035 P39451 P39451 217 224 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2 0.00060247 106.36 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 48884000 3569300 4349900 5785400 9263500 2244200 2158100 9667300 11846000 549 364 591 3224;3225;3226;3227;3228;3229;3230;3231 2319;2320;2321;2322 2320 4 54842000 66337000 49157000 70232000 34552000 32709000 74402000 67981000 DAALSCDQFFVNHR ILFVGTKRAASEAVKDAALSCDQFFVNHRW KDAALSCDQFFVNHRWLGGMLTNWKTVRQS K D A H R W 2 1 1 2 1 1 0 0 1 0 1 0 0 2 0 1 0 0 0 1 0 0 14 0 0 2 1678.7522 P0A7V0 P0A7V0 82 95 rpsB 30S ribosomal protein S2 yes yes 3 5.7706E-12 102.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 99034000 28700000 21353000 0 0 22353000 26628000 0 0 550 128 592 3232;3233;3234;3235 2323;2324;2325;2326 2324 4 28700000 21857000 0 0 26964000 29498000 0 0 DAEANAEADR ASSGLNEDEIQKMVRDAEANAEADRKFEEL QKMVRDAEANAEADRKFEELVQTRNQGDHL R D A D R K 4 1 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 2 4 1060.4421 P0A6Y8 P0A6Y8 518 527 dnaK Chaperone protein DnaK no no 2 2.39E-76 186.16 By MS/MS By MS/MS By MS/MS 1 1 1 158410000 62658000 72026000 0 0 0 23728000 0 0 551 86 593 3236;3237;3238 2327;2328;2329;2330;2331;2332 2328 6 62658000 73726000 0 0 0 26285000 0 0 DAEANAEADRK ASSGLNEDEIQKMVRDAEANAEADRKFEEL KMVRDAEANAEADRKFEELVQTRNQGDHLL R D A R K F 4 1 1 2 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 11 1 2 4 1188.5371 P0A6Y8 P0A6Y8 518 528 dnaK Chaperone protein DnaK yes yes 2 0.00018491 64.711 By MS/MS By MS/MS 2 2 5788800 3937400 0 0 0 0 1851400 0 0 552 86 594 3239;3240;3241;3242 2333;2334;2335;2336;2337 2334 5 3937400 0 0 0 0 2050900 0 0 DAEANAEADRKFEELVQTR ASSGLNEDEIQKMVRDAEANAEADRKFEEL NAEADRKFEELVQTRNQGDHLLHSTRKQVE R D A T R N 4 2 1 2 0 1 4 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 19 2 4 4 2191.0505 P0A6Y8 P0A6Y8 518 536 dnaK Chaperone protein DnaK yes yes 3;4 5.8994E-210 228.01 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 543760000 206970000 169360000 0 0 71416000 96016000 0 0 553 86 595 3243;3244;3245;3246;3247;3248;3249;3250 2338;2339;2340;2341;2342;2343;2344;2345 2338 8 206970000 173350000 0 0 86150000 106360000 0 0 DAEAWFNEK NMRSQYEQLAEQNRKDAEAWFNEKSKELTT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 0 2 2 1108.4825 CON__P13645;CON__Q7Z3Y7;CON__Q7Z3Y8;CON__Q148H6;CON__Q7Z3Z0 CON__P13645 335 343 no no 2 1.2055E-47 167.24 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 353360000 58276000 38509000 0 0 134990000 121590000 0 0 + 554 12;20 596 3251;3252;3253;3254 2346;2347;2348;2349;2350;2351 2351 6 58276000 39418000 0 0 162830000 134690000 0 0 DAEEWFFTK EMRDQYEKMAEKNRKDAEEWFFTKTEELNR AEKNRKDAEEWFFTKTEELNREVATNSELV K D A T K T 1 0 0 1 0 0 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 0 9 0 2 1 1171.5186 CON__P02533;CON__Q6IFX2 CON__P02533 301 309 yes no 2 0.00018317 101.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28260000 4702400 5174100 0 0 9974200 8408900 0 0 + 555 4 597 3255;3256;3257;3258 2352;2353;2354;2355 2354 4 4702400 5296200 0 0 12032000 9315200 0 0 DAEFLFTSMQQAFVK YAMVCINIIAADSNRDAEFLFTSMQQAFVK DAEFLFTSMQQAFVKLRRGETGQLPPPIQN R D A V K L 2 0 0 1 0 2 1 0 0 0 1 1 1 3 0 1 1 0 0 1 0 0 15 0 1 2 1760.8444 P0ADV5 P0ADV5 234 248 yhbW Uncharacterized protein YhbW yes yes 2 9.1781E-31 135.99 By matching By MS/MS By MS/MS 1 1 1 96199000 3008900 0 0 0 59698000 33492000 0 0 556 226 598 3259;3260;3261 2356;2357 2357 2 3008900 0 0 0 72013000 37102000 0 0 DAERFGDVGADTLGHIAE AFIMVLDSFGIGATEDAERFGDVGADTLGH RFGDVGADTLGHIAEACAKGEADNGRKGPL E D A A E A 3 1 0 3 0 0 2 3 1 1 1 0 0 1 0 0 1 0 0 1 0 0 18 1 1 3 1871.865 P0A6K6 P0A6K6 19 36 deoB Phosphopentomutase yes yes 3 0.013285 15.766 By MS/MS By MS/MS 1 1 35173000 0 0 17213000 17960000 0 0 0 0 557 75 599 3262;3263 2358;2359 2358 2 0 0 146260000 136160000 0 0 0 0 DAETWFLSK EMRDQYEQMAEKNRRDAETWFLSKTEELNK AEKNRRDAETWFLSKTEELNKEVASNSELV R D A S K T 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 1 0 0 0 0 9 0 1 1 1095.5237 CON__P08779 CON__P08779 303 311 yes yes 2 0.005335 56.729 By matching By matching By MS/MS 1 1 1 7974100 2494400 0 0 0 3520400 1959300 0 0 + 558 10 600 3264;3265;3266 2360 2360 1 2494400 0 0 0 4246700 2170500 0 0 DAFVGPTLIAYSMEHPGAAAR LLRRAVEGTPFECLKDAFVGPTLIAYSMEH TLIAYSMEHPGAAARLFKEFAKANAKFEVK K D A A R L 5 1 0 1 0 0 1 2 1 1 1 0 1 1 2 1 1 0 1 1 0 0 21 0 1 7 2173.0626 P0A7J3 P0A7J3 74 94 rplJ 50S ribosomal protein L10 yes yes 3 0.0046144 22.902 By matching By MS/MS By MS/MS 1 1 1 79067000 31253000 29203000 0 0 18611000 0 0 0 559 106 601 3267;3268;3269 2361;2362 2362 2 31253000 29892000 0 0 22451000 0 0 0 DAGFQAFADK GIILEVNCQTDFVAKDAGFQAFADKVLDAA DFVAKDAGFQAFADKVLDAAVAGKITDVEV K D A D K V 3 0 0 2 0 1 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 10 0 0 3 1068.4876 P0A6P1 P0A6P1 86 95 tsf Elongation factor Ts yes yes 2 0.0077187 53.089 By MS/MS By MS/MS 1 1 9361700 0 0 0 0 3603800 5757900 0 0 560 77 602 3270;3271 2363 2363 0 0 0 0 0 4347300 6378400 0 0 DAIAADQLFTTLMGDAVEPR TMDPESRRMLRVTVKDAIAADQLFTTLMGD DQLFTTLMGDAVEPRRAFIEENALKAANID K D A P R R 4 1 0 3 0 1 1 1 0 1 2 0 1 1 1 0 2 0 0 1 0 0 20 0 1 5 2133.0412 P0AES6 P0AES6 769 788 gyrB DNA gyrase subunit B yes yes 2;3 1.5033E-36 155.28 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 113890000 35784000 17397000 0 0 22415000 38294000 0 0 561 239 603 3272;3273;3274;3275;3276;3277;3278 2364;2365;2366;2367;2368;2369 2368 4 35784000 17808000 0 0 27039000 42421000 0 0 DAIFIEELRKA LGEVKKEYCDLLRRADAIFIEELRKADLYD LRRADAIFIEELRKADLYDKVSQAFTVFLP A D A K A D 2 1 0 1 0 0 2 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 11 2 2 1 1303.7136 P04079 P04079 428 438 guaA GMP synthase [glutamine-hydrolyzing] yes yes 2 0.016927 36.334 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 7664400 918480 985340 0 0 4259900 1500600 0 0 562 44 604 3279;3280;3281;3282;3283;3284 2370 2370 0 14112000 12712000 0 0 55215000 2139100 0 0 DAKDQAGIDKIMIDLDGTENK VAAVNGPIAQALIGKDAKDQAGIDKIMIDL GIDKIMIDLDGTENKSKFGANAILAVSLAN K D A N K S 2 0 1 5 0 1 1 2 0 3 1 3 1 0 0 0 1 0 0 0 0 0 21 2 1 2 2289.1158 P0A6P9 P0A6P9 83 103 eno Enolase yes yes 4 0.021091 17.595 By matching By MS/MS By matching 1 1 1 60728000 17030000 21836000 0 0 0 21862000 0 0 563 79 605 3285;3286;3287 2371 2371 0 17030000 22352000 0 0 0 24218000 0 0 DALHATRAAVE AATEVEMKEKKARVEDALHATRAAVEEGVV ARVEDALHATRAAVEEGVVAGGGVALIRVA E D A V E E 4 1 0 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 11 1 0 4 1152.5887 P0A6F5 P0A6F5 398 408 groL 60 kDa chaperonin yes yes 2;3 9.024E-10 104.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 3 2 3 2 214750000 25768000 22162000 19960000 14619000 24559000 22668000 40319000 44700000 564 68 606 3288;3289;3290;3291;3292;3293;3294;3295;3296;3297;3298;3299;3300;3301;3302;3303;3304 2372;2373;2374;2375;2376;2377;2378;2379;2380;2381 2377 9 395910000 337970000 169600000 110840000 361850000 343570000 310300000 256530000 DALHATRAAVEE AATEVEMKEKKARVEDALHATRAAVEEGVV RVEDALHATRAAVEEGVVAGGGVALIRVAS E D A E E G 4 1 0 1 0 0 2 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 12 1 1 4 1281.6313 P0A6F5 P0A6F5 398 409 groL 60 kDa chaperonin yes yes 2;3 7.0436E-66 175.33 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 4 3 2 3 8742300000 1237500000 1063400000 1117800000 1225200000 521410000 542800000 1269300000 1764900000 565 68 607 3305;3306;3307;3308;3309;3310;3311;3312;3313;3314;3315;3316;3317;3318;3319;3320;3321;3322;3323;3324;3325;3326 2382;2383;2384;2385;2386;2387;2388;2389;2390 2386 6 13642000000 11715000000 9497400000 9288600000 5372000000 5874200000 9769200000 10129000000 DALLGLPVK ______________________________ VGGAVRDALLGLPVKDRDWVVVGSTPQEML R D A V K D 1 0 0 1 0 0 0 1 0 0 3 1 0 0 1 0 0 0 0 1 0 0 9 0 0 2 924.56442 P06961 P06961 12 20 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 2 0.0027989 67.032 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 18631000 4301400 5605900 0 0 4434300 4289500 0 0 566 54 608 3327;3328;3329;3330 2391;2392;2393 2391 3 4301400 5738200 0 0 5349200 4751800 0 0 DALQQAKE ENALKDAKNKLNDLEDALQQAKEDLARLLR NKLNDLEDALQQAKEDLARLLRDYQELMNT E D A K E D 2 0 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 0 2 901.45051 CON__P04264 CON__P04264 449 456 yes yes 2 0.0014448 89.296 By MS/MS By MS/MS 1 1 3826600 0 0 0 0 0 0 3826600 0 + 567 9 609 3331;3332 2394;2395 2395 2 0 0 0 0 0 0 29450000 0 DALVADFPGLTR NVGKSTLFNRLTRTRDALVADFPGLTRDRK RTRDALVADFPGLTRDRKYGRAEIEGREFI R D A T R D 2 1 0 2 0 0 0 1 0 0 2 0 0 1 1 0 1 0 0 1 0 0 12 0 0 3 1273.6667 P0A6P5 P0A6P5 27 38 der GTPase Der yes yes 2 0.00016358 52.79 By MS/MS 1 0 0 0 0 0 0 0 0 0 568 78 610 3333 2396 2396 1 0 0 0 0 0 0 0 0 DAMFTTSSENR DRVLWEKTGHWDNYKDAMFTTSSENREYCI DNYKDAMFTTSSENREYCIKPMNCPGHVQI K D A N R E 1 1 1 1 0 0 1 0 0 0 0 0 1 1 0 2 2 0 0 0 0 0 11 0 1 1 1257.5296 P0A8M3 P0A8M3 315 325 thrS Threonine--tRNA ligase yes yes 2 5.936E-05 94.692 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33406000 9433200 8063200 0 0 7361700 8548400 0 0 569 147 611 3334;3335;3336;3337 2397;2398;2399;2400 2400 4 9433200 8253500 0 0 8880400 9469700 0 0 DANDTGSTEVQVALLTAQINHLQGHFAEHK LSTEATAKIVSEFGRDANDTGSTEVQVALL TAQINHLQGHFAEHKKDHHSRRGLLRMVSQ R D A H K K 4 0 2 2 0 3 2 2 3 1 3 1 0 1 0 1 3 0 0 2 0 0 30 0 2 4 3243.5909 P0ADZ4 P0ADZ4 18 47 rpsO 30S ribosomal protein S15 yes yes 3;4;5 0 302.66 By MS/MS By MS/MS By MS/MS By MS/MS 5 4 7 5 3703800000 546010000 518390000 0 0 1373200000 1266200000 0 0 570 231 612 3338;3339;3340;3341;3342;3343;3344;3345;3346;3347;3348;3349;3350;3351;3352;3353;3354;3355;3356;3357;3358 2401;2402;2403;2404;2405;2406;2407;2408;2409;2410;2411;2412;2413;2414 2404 14 614310000 545330000 0 0 2658300000 1634600000 0 0 DANDTGSTEVQVALLTAQINHLQGHFAEHKK LSTEATAKIVSEFGRDANDTGSTEVQVALL AQINHLQGHFAEHKKDHHSRRGLLRMVSQR R D A K K D 4 0 2 2 0 3 2 2 3 1 3 2 0 1 0 1 3 0 0 2 0 0 31 1 2 4 3371.6858 P0ADZ4 P0ADZ4 18 48 rpsO 30S ribosomal protein S15 yes yes 3;4;5 8.2679E-273 242.75 By MS/MS By MS/MS By MS/MS By MS/MS 4 2 4 2 1464900000 344170000 407050000 0 0 401530000 312150000 0 0 571 231 613 3359;3360;3361;3362;3363;3364;3365;3366;3367;3368;3369;3370 2415;2416;2417;2418;2419;2420;2421;2422;2423;2424;2425;2426;2427;2428;2429 2429 15 374710000 416660000 0 0 596170000 345800000 0 0 DANFSNNAMAE EADEKDAIATVNKQEDANFSNNAMAEAFKA NKQEDANFSNNAMAEAFKAAKGE_______ E D A A E A 3 0 3 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 11 0 0 3 1182.4612 P0AG67 P0AG67 539 549 rpsA 30S ribosomal protein S1 yes yes 2 0.0034674 50.04 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 32889000 0 0 10232000 9342400 0 0 5114300 8200100 572 261 614;615 3371;3372;3373;3374;3375;3376;3377 2430;2431;2432;2433 2432 230 4 0 0 86944000 70830000 0 0 39361000 47059000 DAPDYQYLAAR IHETIIKAAADLISRDAPDYQYLAARLAIF LISRDAPDYQYLAARLAIFHLRKKAYGQFE R D A A R L 3 1 0 2 0 1 0 0 0 0 1 0 0 0 1 0 0 0 2 0 0 0 11 0 0 4 1281.599 P00452;P00452-2 P00452 73 83 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 0.0034838 56.563 By matching By MS/MS 1 1 11957000 0 4144900 0 0 7812500 0 0 0 573 26 616 3378;3379 2434 2434 1 0 4242800 0 0 9424300 0 0 0 DAQKDVGE YTEADQYGTTVIAGEDAQKDVGEAKYNPFA TTVIAGEDAQKDVGEAKYNPFADLKAMMNK E D A G E A 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 8 1 0 1 860.38758 P0AAQ2 P0AAQ2 91 98 yajD Uncharacterized protein YajD yes yes 2 0.0052354 86.833 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 73347000 0 0 12984000 16881000 0 0 18570000 24912000 574 188 617 3380;3381;3382;3383 2435;2436;2437 2436 3 0 0 110330000 127980000 0 0 142920000 142970000 DAQSALTVSETTFGR ______________________________ DAQSALTVSETTFGRDFNEALVHQVVVAYA K D A G R D 2 1 0 1 0 1 1 1 0 0 1 0 0 1 0 2 3 0 0 1 0 0 15 0 1 2 1581.7635 P60723 P60723 7 21 rplD 50S ribosomal protein L4 yes yes 2 8.184E-191 228.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 252900000 52389000 58706000 0 0 67432000 74371000 0 0 575 383 618 3384;3385;3386;3387 2438;2439;2440;2441 2438 4 52389000 60092000 0 0 81343000 82386000 0 0 DAQVLDELMGER GETQALVTATLGTARDAQVLDELMGERTDT TARDAQVLDELMGERTDTFLFHYNFPPYSV R D A E R T 1 1 0 2 0 1 2 1 0 0 2 0 1 0 0 0 0 0 0 1 0 0 12 0 2 1 1374.6449 P05055 P05055 361 372 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 1.2181E-09 131.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 44477000 12992000 7857400 0 0 12037000 11590000 0 0 576 48 619 3388;3389;3390;3391;3392 2442;2443;2444;2445;2446 2442 5 12992000 8042900 0 0 14521000 12956000 0 0 DASESDVEASLDR GLHLQESIAEQGALRDASESDVEASLDRLN LRDASESDVEASLDRLNRWNNNRNGEDPVA R D A D R L 2 1 0 3 0 0 2 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 13 0 2 2 1392.6005 P0AC41 P0AC41 431 443 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 5.0207E-139 213.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 237400000 53028000 65186000 0 0 61461000 57725000 0 0 577 203 620 3393;3394;3395;3396 2447;2448;2449;2450 2447 4 53028000 66724000 0 0 74141000 63946000 0 0 DATGIDPVSLIAFDK NLFLAARNLHKVDVRDATGIDPVSLIAFDK DATGIDPVSLIAFDKVVMTADAVKQVEEML R D A D K V 2 0 0 3 0 0 0 1 0 2 1 1 0 1 1 1 1 0 0 1 0 0 15 0 0 3 1560.8035 P60723 P60723 171 185 rplD 50S ribosomal protein L4 yes yes 2 4.8866E-15 136.27 By matching By MS/MS By matching 1 1 1 455590000 207070000 0 0 0 119310000 129210000 0 0 578 383 621 3397;3398;3399 2451 2451 1 207070000 0 0 0 143920000 143140000 0 0 DATSATTTTSLGGLFK SIDAVHYCVKARGIRDATSATTTTSLGGLF ATSATTTTSLGGLFKSSQNTRHEFLRAVRH R D A F K S 2 0 0 1 0 0 0 2 0 0 2 1 0 1 0 2 5 0 0 0 0 0 16 0 0 2 1569.7886 P0A6T5 P0A6T5 190 205 folE GTP cyclohydrolase 1 yes yes 2 8.671E-99 186.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 134890000 29416000 26205000 0 0 33319000 45955000 0 0 579 81 622 3400;3401;3402;3403 2452;2453;2454;2455 2455 4 29416000 26824000 0 0 40192000 50908000 0 0 DAVKEYGIKNLEVMVKGP KSTPFAAQVAAERCADAVKEYGIKNLEVMV KEYGIKNLEVMVKGPGPGRESTIRALNAAG A D A G P G 1 0 1 1 0 0 2 2 0 1 1 3 1 0 1 0 0 0 1 3 0 0 18 3 2 1 1989.0605 P0A7R9 P0A7R9 72 89 rpsK 30S ribosomal protein S11 yes yes 4 0.0087773 23.562 By MS/MS By MS/MS 1 1 5206900 0 0 0 0 2522100 2684800 0 0 580 121 623 3404;3405 2456 2456 1 0 0 0 0 3590700 3827200 0 0 DAVVVLENDLHRHA GSLEEALTELETGRADAVVVLENDLHRHAS ADAVVVLENDLHRHASAIRVNAALAKAPLV A D A H A S 2 1 1 2 0 0 1 0 2 0 2 0 0 0 0 0 0 0 0 3 0 0 14 1 1 1 1586.8165 P33602 P33602 562 575 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 1.8398E-08 80.522 By MS/MS By MS/MS By MS/MS 1 1 1 6968000 358800 0 0 0 4455300 2153800 0 0 581 345 624 3406;3407;3408 2457 2457 1 2165900 0 0 0 6343000 3070300 0 0 DAYDVLIVGSGPAGAAAAIYSAR DTGAEKRAAEELNKRDAYDVLIVGSGPAGA GSGPAGAAAAIYSARKGIRTGLMGERFGGQ R D A A R K 7 1 0 2 0 0 0 3 0 2 1 0 0 0 1 2 0 0 2 2 0 0 23 0 0 8 2207.1222 P35340 P35340 211 233 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 9.0614E-248 241.93 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 352110000 32138000 61742000 0 0 154930000 103300000 0 0 582 348 625 3409;3410;3411;3412;3413;3414;3415 2458;2459;2460;2461;2462;2463 2462 6 32138000 63200000 0 0 186890000 114430000 0 0 DDDVVDAEFEEVK QQQTAGADASANNAKDDDVVDAEFEEVKDK AKDDDVVDAEFEEVKDKK____________ K D D V K D 1 0 0 4 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 3 0 0 13 0 3 1 1508.6518 P0A6Y8 P0A6Y8 623 635 dnaK Chaperone protein DnaK yes yes 2 4.2163E-70 173.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 175120000 45183000 49076000 0 0 37468000 43395000 0 0 583 86 626 3416;3417;3418;3419 2464;2465;2466;2467 2467 4 45183000 50234000 0 0 45198000 48071000 0 0 DDDVVDAEFEEVKDK QQQTAGADASANNAKDDDVVDAEFEEVKDK DDDVVDAEFEEVKDKK______________ K D D D K K 1 0 0 5 0 0 3 0 0 0 0 2 0 1 0 0 0 0 0 3 0 0 15 1 3 1 1751.7738 P0A6Y8 P0A6Y8 623 637 dnaK Chaperone protein DnaK yes yes 2;3 9.1943E-06 73.435 By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 63894000 12143000 10801000 0 0 17180000 23771000 0 0 584 86 627 3420;3421;3422;3423;3424;3425;3426;3427 2468;2469;2470;2471 2470 4 12143000 11056000 0 0 20724000 26333000 0 0 DDDVVDAEFEEVKDKK QQQTAGADASANNAKDDDVVDAEFEEVKDK DDVVDAEFEEVKDKK_______________ K D D K K - 1 0 0 5 0 0 3 0 0 0 0 3 0 1 0 0 0 0 0 3 0 0 16 2 3 1 1879.8687 P0A6Y8 P0A6Y8 623 638 dnaK Chaperone protein DnaK yes yes 3 1.1774E-45 150.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 304700000 83242000 66714000 0 0 60511000 94232000 0 0 585 86 628 3428;3429;3430;3431 2472;2473;2474;2475 2475 4 83242000 68288000 0 0 72995000 104390000 0 0 DDEILTHPVFNR DVAHDSRSIQPAMLRDDEILTHPVFNRYHS MLRDDEILTHPVFNRYHSETEMMRYMHSLE R D D N R Y 0 1 1 2 0 0 1 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 12 0 1 1 1454.7154 P33195 P33195 470 481 gcvP Glycine dehydrogenase (decarboxylating) yes yes 3 0.021912 24.071 By matching By MS/MS By matching 1 1 1 12993000 5613500 4658300 0 0 2721100 0 0 0 586 344 629 3432;3433;3434 2476 2476 1 5613500 4768200 0 0 3282400 0 0 0 DDERYPGHDPR QWRRGFAVTPPELTKDDERYPGHDPRYAKL ELTKDDERYPGHDPRYAKLSEKELPLTESL K D D P R Y 0 2 0 3 0 0 1 1 1 0 0 0 0 0 2 0 0 0 1 0 0 0 11 1 1 2 1355.5854 P62707 P62707 129 139 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase yes yes 3 0.0071819 39.148 By MS/MS By MS/MS 1 1 4667000 1510700 3156300 0 0 0 0 0 0 587 390 630 3435;3436 2477 2477 1 1510700 3230800 0 0 0 0 0 0 DDEVIVLTGK ______________________________ AKIRRDDEVIVLTGKDKGKRGKVKNVLSSG R D D G K D 0 0 0 2 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1 0 1087.5761 P60624 P60624 8 17 rplX 50S ribosomal protein L24 yes yes 2 2.3895E-05 105.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 64768000 15253000 0 12251000 0 15910000 21354000 0 0 588 381 631 3437;3438;3439;3440;3441;3442;3443 2478;2479;2480;2481 2481 4 78284000 0 104090000 0 19192000 88830000 0 0 DDGYLPEALLNYLVR KLSKRHGAVSVMQYRDDGYLPEALLNYLVR DDGYLPEALLNYLVRLGWSHGDQEIFTREE R D D V R L 1 1 1 2 0 0 1 1 0 0 4 0 0 0 1 0 0 0 2 1 0 0 15 0 1 2 1749.8938 P04805 P04805 252 266 gltX Glutamate--tRNA ligase yes yes 2 0.00020442 66.595 By matching By matching By MS/MS By MS/MS 1 1 1 1 21559000 3017800 2938500 0 0 7877200 7725900 0 0 589 45 632 3444;3445;3446;3447 2482 2482 1 3017800 3007900 0 0 9502300 8558600 0 0 DDHVVVDGNHMLAGQNLKFNVE ETDQGPVPVEITAVEDDHVVVDGNHMLAGQ GNHMLAGQNLKFNVEVVAIREATEEELAHG E D D V E V 1 0 3 3 0 1 1 2 2 0 2 1 1 1 0 0 0 0 0 4 0 0 22 1 0 1 2450.1649 P0A9K9 P0A9K9 114 135 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3;4 2.5098E-99 169.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 2 3 4 4 3 2 1319100000 84490000 83473000 32728000 45232000 463680000 433860000 74614000 100970000 590 169 633;634 3448;3449;3450;3451;3452;3453;3454;3455;3456;3457;3458;3459;3460;3461;3462;3463;3464;3465;3466;3467;3468;3469;3470;3471;3472;3473 2483;2484;2485;2486;2487;2488;2489;2490;2491;2492;2493;2494;2495;2496;2497;2498;2499;2500;2501;2502;2503;2504;2505;2506 2501 159 24 1298200000 1273000000 278090000 342930000 7138800000 6575800000 574250000 579470000 DDIAITLHHKLCHAA DAGAIVAQLRIAIAPDDIAITLHHKLCHAA DDIAITLHHKLCHAARQLLEQTLPAIKHGN P D D A A R 3 0 0 2 1 0 0 0 3 2 2 1 0 0 0 0 1 0 0 0 0 0 15 1 0 2 1713.8621 P77398 P77398 155 169 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 4.5602E-05 67.234 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 93463000 3464800 3611700 0 0 52957000 33430000 0 0 591 432 635 3474;3475;3476;3477 2507;2508;2509 2509 2 20916000 21616000 0 0 75394000 47654000 0 0 DDLAPSLGR VLEPRSNTMKMGICKDDLAPSLGRADEVFL KMGICKDDLAPSLGRADEVFLLQPAHIPWQ K D D G R A 1 1 0 2 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 9 0 0 2 942.47706 P37773 P37773 372 380 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.0040113 60.91 By matching By matching By MS/MS By MS/MS 1 1 1 1 34690000 7855700 10080000 0 0 7351700 9402900 0 0 592 360 636 3478;3479;3480;3481 2510;2511 2511 2 7855700 10318000 0 0 8868400 10416000 0 0 DDLNLVLATAAK PLYQKHIISINDLSRDDLNLVLATAAKLKA LSRDDLNLVLATAAKLKANPQPELLKHKVI R D D A K L 3 0 1 2 0 0 0 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 12 0 0 3 1242.682 P0A786 P0A786 19 30 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.0031048 57.019 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30519000 7161900 6624400 0 0 7830100 8902200 0 0 593 97 637 3482;3483;3484;3485 2512;2513;2514 2514 3 7161900 6780700 0 0 9445500 9861600 0 0 DDRVRMTPHPVEFE TDEAIDAYIALRREEDDRVRMTPHPVEFEL EDDRVRMTPHPVEFELYYSV__________ E D D F E L 0 2 0 2 0 0 2 0 1 0 0 0 1 1 2 0 1 0 0 2 0 0 14 2 1 2 1726.8097 P0A9C5 P0A9C5 451 464 glnA Glutamine synthetase yes yes 3 0.0083331 28.632 By MS/MS By MS/MS 1 1 14915000 0 0 8481800 6433500 0 0 0 0 594 164 638 3486;3487 2515;2516 2516 2 0 0 72069000 48776000 0 0 0 0 DDSFLEWHKP AQRENEATCFGRRTPDDSFLEWHKPASVLH GRRTPDDSFLEWHKPASVLHNMVRAVADPW P D D K P A 0 0 0 2 0 0 1 0 1 0 1 1 0 1 1 1 0 1 0 0 0 0 10 1 1 0 1272.5775 P77398 P77398 204 213 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 8.549E-17 145.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1254600000 94838000 92896000 0 0 555210000 511650000 0 0 595 432 639 3488;3489;3490;3491;3492;3493;3494;3495 2517;2518;2519;2520;2521;2522 2518 6 572490000 555980000 0 0 790440000 729350000 0 0 DDSFLEWHKPA AQRENEATCFGRRTPDDSFLEWHKPASVLH RRTPDDSFLEWHKPASVLHNMVRAVADPWP P D D P A S 1 0 0 2 0 0 1 0 1 0 1 1 0 1 1 1 0 1 0 0 0 0 11 1 1 1 1343.6146 P77398 P77398 204 214 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 9.4145E-05 94.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 119740000 7133300 6535400 0 0 74047000 32026000 0 0 596 432 640 3496;3497;3498;3499;3500;3501 2523;2524;2525;2526;2527;2528 2527 4 43061000 39115000 0 0 105420000 45653000 0 0 DDSHGYELIK GHGELRLVILDILSRDDSHGYELIKAIENL DILSRDDSHGYELIKAIENLTQGNYTPSPG R D D I K A 0 0 0 2 0 0 1 1 1 1 1 1 0 0 0 1 0 0 1 0 0 0 10 0 1 0 1175.5459 P64588 P64588 74 83 yqjI Transcriptional regulator YqjI yes yes 2;3 8.0422E-38 158.57 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1102300000 257610000 301930000 0 0 247900000 294800000 0 0 597 398 641 3502;3503;3504;3505;3506;3507;3508;3509 2529;2530;2531;2532;2533;2534;2535;2536 2533 8 257610000 309060000 0 0 299050000 326580000 0 0 DDSILLAQHTR YYPQIAPCIIVAIRRDDSILLAQHTRHRNG AIRRDDSILLAQHTRHRNGVHTVLAGFVEV R D D T R H 1 1 0 2 0 1 0 0 1 1 2 0 0 0 0 1 1 0 0 0 0 0 11 0 0 1 1267.6521 P32664 P32664 138 148 nudC NADH pyrophosphatase yes yes 2 1.9508E-51 163.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 84532000 18853000 20420000 0 0 23659000 21600000 0 0 598 340 642 3510;3511;3512;3513 2537;2538;2539;2540 2540 4 18853000 20902000 0 0 28541000 23928000 0 0 DDVLQAVFDK GKAGMELFDLRLHERDDVLQAVFDKGTSKF RLHERDDVLQAVFDKGTSKFQLTYDDRALQ R D D D K G 1 0 0 3 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 2 0 0 10 0 0 1 1148.5714 P75990 P75990 103 112 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 0.00042617 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9391600 0 3201300 0 0 2551400 3638900 0 0 599 414 643 3514;3515;3516;3517 2541;2542;2543;2544 2544 4 0 3276900 0 0 3077800 4031100 0 0 DDVMIGAGSLVPQNKRLE LVGMGSILLDGAIVEDDVMIGAGSLVPQNK MIGAGSLVPQNKRLESGYLYLGSPVKQIRP E D D L E S 1 1 1 2 0 1 1 2 0 1 2 1 1 0 1 1 0 0 0 2 0 0 18 2 0 2 1940.999 P0A9W9 P0A9W9 120 137 yrdA Protein YrdA yes yes 3 3.6684E-12 72.819 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 43618000 13363000 0 0 12334000 4237300 13685000 0 0 600 179 644;645 3518;3519;3520;3521;3522;3523;3524;3525 2545;2546;2547;2548;2549;2550;2551 2549 170 7 205310000 0 0 93510000 65236000 207410000 0 0 DEEGLEIIR DLIENDAQLSIITAKDEEGLEIIRHSCAHL SIITAKDEEGLEIIRHSCAHLLGHAIKQLW K D E I R H 0 1 0 1 0 0 3 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 9 0 3 0 1072.5401 P0A8M3 P0A8M3 64 72 thrS Threonine--tRNA ligase yes yes 2 1.4566E-13 130.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 114780000 24494000 23097000 0 0 35522000 31671000 0 0 601 147 646 3526;3527;3528;3529 2552;2553;2554;2555;2556;2557 2553 6 24494000 23643000 0 0 42851000 35084000 0 0 DEENMPGSR SVRQGAKHVTCAYRRDEENMPGSRREVKNA TCAYRRDEENMPGSRREVKNAREEGVEFKF R D E S R R 0 1 1 1 0 0 2 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 9 0 2 1 1033.4135 P09832 P09832 321 329 gltD Glutamate synthase [NADPH] small chain yes yes 2 0.010624 50.607 By MS/MS By MS/MS By MS/MS 1 1 1 2224000 1031100 632240 0 0 560750 0 0 0 602 65 647 3530;3531;3532 2558 2558 1 1031100 647160 0 0 676440 0 0 0 DEGDKWR LEYLEEKYEEHLYERDEGDKWRNKKFELGL YEEHLYERDEGDKWRNKKFELGLEFPNLPY R D E W R N 0 1 0 2 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 7 1 1 0 904.40389 GST-Nek6 GST-Nek6 36 42 yes yes 2 0.0068712 83.614 By MS/MS By MS/MS 1 1 84939000 0 0 0 0 39363000 45576000 0 0 603 23 648 3533;3534 2559 2559 1 0 0 0 0 47483000 50488000 0 0 DEIMVNGQIFDHQA KVRHGLQSILRETDADEIMVNGQIFDHQAR ADEIMVNGQIFDHQARLHSFELAMDVKEEL A D E Q A R 1 0 1 2 0 2 1 1 1 2 0 0 1 1 0 0 0 0 0 1 0 0 14 0 1 0 1615.7301 P0ADV5 P0ADV5 305 318 yhbW Uncharacterized protein YhbW yes yes 2 1.5537E-57 164.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 108170000 17710000 18589000 0 0 44339000 27533000 0 0 604 226 649;650 3535;3536;3537;3538;3539;3540;3541;3542 2560;2561;2562;2563;2564;2565;2566;2567;2568 2567 202 9 106900000 111260000 0 0 63125000 39248000 0 0 DELTVGGIK PTLPGQPQNPCVWPRDELTVGGIKAHIDTF PCVWPRDELTVGGIKAHIDTFQRWLGDAFD R D E I K A 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1 0 930.50221 P27249 P27249 29 37 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0020683 81.191 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 106080000 28288000 25682000 0 0 25448000 26658000 0 0 605 320 651 3543;3544;3545;3546;3547 2569;2570;2571;2572 2570 4 28288000 26288000 0 0 40962000 29531000 0 0 DEMVEQEFNR CPLYEANGQAVPKEKDEMVEQEFNRLLEAT VPKEKDEMVEQEFNRLLEATSYLSHQLDFN K D E N R L 0 1 1 1 0 1 3 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 10 0 3 0 1295.5452 LSD1-FL-His LSD1-FL-His 377 386 yes yes 2 3.5433E-226 244.76 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 849010000 239050000 236080000 0 0 185940000 187940000 0 0 606 24 652;653 3548;3549;3550;3551;3552;3553;3554;3555;3556;3557 2573;2574;2575;2576;2577;2578;2579;2580 2576 42 7 239050000 241660000 0 0 224300000 208200000 0 0 DEQIEHWK QALEVVIQLQEKHVKDEQIEHWKKIVKTQE LQEKHVKDEQIEHWKKIVKTQEELKELLNK K D E W K K 0 0 0 1 0 1 2 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 8 0 2 0 1083.4985 LSD1-FL-His LSD1-FL-His 427 434 yes yes 2;3 2.8793E-18 149.82 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3395300000 996600000 1107600000 0 0 618810000 672300000 0 0 607 24 654 3558;3559;3560;3561;3562;3563;3564;3565 2581;2582;2583;2584;2585;2586;2587;2588;2589;2590 2585 10 996600000 1133700000 0 0 746480000 744760000 0 0 DEQIEHWKK QALEVVIQLQEKHVKDEQIEHWKKIVKTQE QEKHVKDEQIEHWKKIVKTQEELKELLNKM K D E K K I 0 0 0 1 0 1 2 0 1 1 0 2 0 0 0 0 0 1 0 0 0 0 9 1 2 0 1211.5935 LSD1-FL-His LSD1-FL-His 427 435 yes yes 2;3 7.0598E-75 183.43 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1642200000 572230000 702450000 0 0 188010000 179510000 0 0 608 24 655 3566;3567;3568;3569;3570;3571;3572;3573;3574 2591;2592;2593;2594;2595;2596;2597;2598 2592 8 582610000 719030000 0 0 226790000 198860000 0 0 DESMNIR GAGFSTGLKWSLMPKDESMNIRYLLCNADE LKWSLMPKDESMNIRYLLCNADEMEPGTYK K D E I R Y 0 1 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 7 0 1 0 863.38072 P31979 P31979 79 85 nuoF NADH-quinone oxidoreductase subunit F yes yes 2 0.0078723 58.687 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 12035000 3388800 3024400 0 0 3336900 2284900 0 0 609 336 656 3575;3576;3577;3578 2599;2600 2599 2 3388800 3095800 0 0 4025300 2531200 0 0 DESVEVPSVGGRPPR IKVRHGCALGSIVGKDESVEVPSVGGRPPR DESVEVPSVGGRPPRSLQRQTLAEVIEPRY K D E P R S 0 2 0 1 0 0 2 2 0 0 0 0 0 0 3 2 0 0 0 3 0 0 15 1 2 3 1579.7954 P0ABH0 P0ABH0 272 286 ftsA Cell division protein FtsA yes yes 2;3 3.1937E-40 152.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 165850000 10010000 62273000 0 0 44995000 48570000 0 0 610 199 657 3579;3580;3581;3582;3583;3584;3585;3586 2601;2602;2603;2604;2605;2606;2607;2608;2609 2606 9 10010000 63743000 0 0 54278000 53804000 0 0 DETLFMR IDDEFQLRGTLIDLRDETLFMRQPEAILRM RGTLIDLRDETLFMRQPEAILRMFYTMVHN R D E M R Q 0 1 0 1 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 1 0 910.42185 P27249 P27249 365 371 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0020446 97.596 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51799000 12446000 9279900 0 0 22324000 7748700 0 0 611 320 658 3587;3588;3589;3590 2610;2611;2612;2613 2610 4 12446000 9499000 0 0 26929000 8583800 0 0 DEVIDHLGTIAK KRTLTISDNGVGMTRDEVIDHLGTIAKSGT MTRDEVIDHLGTIAKSGTKSFLESLGSDQA R D E A K S 1 0 0 2 0 0 1 1 1 2 1 1 0 0 0 0 1 0 0 1 0 0 12 0 1 1 1309.6878 P0A6Z3 P0A6Z3 88 99 htpG Chaperone protein HtpG yes yes 2;3 2.888E-138 225.31 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 174480000 58717000 37021000 0 0 43392000 35353000 0 0 612 88 659 3591;3592;3593;3594;3595;3596;3597;3598 2614;2615;2616;2617;2618;2619 2615 6 58717000 37895000 0 0 52344000 39163000 0 0 DEYLLQQLDDTEIRGP PATDDVNPLQAWEAADEYLLQQLDDTEIRG EYLLQQLDDTEIRGPVLILNDAFGALSCAL A D E G P V 0 1 0 3 0 2 2 1 0 1 3 0 0 0 1 0 1 0 1 0 0 0 16 1 2 0 1903.9163 P42596 P42596 32 47 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 2.8739E-138 204.49 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45417000 2883600 3478400 0 0 19978000 19078000 0 0 613 366 660 3599;3600;3601;3602 2620;2621;2622;2623;2624 2624 5 17407000 20818000 0 0 28442000 27195000 0 0 DEYNPDKLR EVATLITALGCGIGRDEYNPDKLRYHSIII GCGIGRDEYNPDKLRYHSIIIMTDADVDGS R D E L R Y 0 1 1 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 9 1 1 1 1148.5462 P0AES6 P0AES6 481 489 gyrB DNA gyrase subunit B yes yes 2 3.5409E-05 107.66 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 36078000 11128000 9266000 0 0 6284000 9400000 0 0 614 239 661 3603;3604;3605;3606 2625;2626 2625 2 11128000 9484700 0 0 7580400 10413000 0 0 DFDDPLNQQHRPR EILIDRGWDMATGEKDFDDPLNQQHRPRRL EKDFDDPLNQQHRPRRLTPRECARLMGFEA K D F P R R 0 2 1 3 0 2 0 0 1 0 1 0 0 1 2 0 0 0 0 0 0 0 13 1 0 2 1636.7706 P0AED9 P0AED9 388 400 dcm DNA-cytosine methyltransferase yes yes 3;4 4.6882E-11 114.86 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 162640000 31753000 31231000 0 0 46560000 53102000 0 0 615 235 662 3607;3608;3609;3610;3611;3612;3613;3614 2627;2628;2629;2630;2631;2632;2633;2634 2633 8 31753000 31968000 0 0 56165000 58825000 0 0 DFEAQLASTETQVGNELAPLK ELMPQSRAKLDANLKDFEAQLASTETQVGN ASTETQVGNELAPLKGKGYFVFHDAYGYFE K D F L K G 3 0 1 1 0 2 3 1 0 0 3 1 0 1 1 1 2 0 0 1 0 0 21 0 3 4 2260.1223 P39172 P39172 179 199 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 2.5525E-72 157.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 104230000 19825000 17597000 0 0 23413000 43400000 0 0 616 361 663 3615;3616;3617;3618;3619 2635;2636;2637;2638 2638 4 19825000 18013000 0 0 28243000 48077000 0 0 DFETLKVDFLSK VLDIRYGVSRIAYSKDFETLKVDFLSKLPE YSKDFETLKVDFLSKLPEMLKMFEDRLCHK K D F S K L 0 0 0 2 0 0 1 0 0 0 2 2 0 2 0 1 1 0 0 1 0 0 12 1 1 0 1440.75 GST-Nek6 GST-Nek6 114 125 yes yes 2;3 8.8249E-84 172.8 By MS/MS By MS/MS 3 3 107540000 0 0 0 0 47286000 60253000 0 0 617 23 664;665 3620;3621;3622;3623;3624;3625 2639;2640;2641;2642;2643;2644 2641 36 4 0 0 0 0 57041000 66747000 0 0 DFFRQVESSP QHNQAYTEAMLTEYADFFRQVESSPLNPAQ LTEYADFFRQVESSPLNPAQARAVVNGEHS A D F S P L 0 1 0 1 0 1 1 0 0 0 0 0 0 2 1 2 0 0 0 1 0 0 10 1 1 0 1210.5619 P15038 P15038 187 196 helD Helicase IV yes yes 2 0.00015221 66.692 By MS/MS 1 0 0 0 0 0 0 0 0 0 618 281 666 3626 2645 2645 1 0 0 0 0 0 0 0 0 DFNEALVHQVVVAYAAGAR DAQSALTVSETTFGRDFNEALVHQVVVAYA ALVHQVVVAYAAGARQGTRAQKTRAEVTGS R D F A R Q 5 1 1 1 0 1 1 1 1 0 1 0 0 1 0 0 0 0 1 4 0 0 19 0 1 5 2029.0381 P60723 P60723 22 40 rplD 50S ribosomal protein L4 yes yes 3 1.2685E-53 152.01 By MS/MS By MS/MS By MS/MS 1 1 1 188020000 62441000 58301000 0 0 67277000 0 0 0 619 383 667 3627;3628;3629 2646;2647;2648 2647 3 62441000 59677000 0 0 81157000 0 0 0 DFPVFLHPQTHEEYALAR TPQEMLDAGYQQVGRDFPVFLHPQTHEEYA VFLHPQTHEEYALARTERKSGSGYTGFTCY R D F A R T 2 1 0 1 0 1 2 0 2 0 2 0 0 2 2 0 1 0 1 1 0 0 18 0 2 4 2169.0643 P06961 P06961 45 62 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 3 4.2325E-08 60.564 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 28855000 11386000 6421600 0 0 5958300 5088900 0 0 620 54 668 3630;3631;3632;3633 2649;2650;2651;2652 2650 4 11386000 6573200 0 0 7187600 5637400 0 0 DFSDKHHALFLGRGDQYPIALE EQMLSQDKRIEALAEDFSDKHHALFLGRGD ALFLGRGDQYPIALEGALKLKEISYIHAEA E D F L E G 2 1 0 3 0 1 1 2 2 1 3 1 0 2 1 1 0 0 1 0 0 0 22 2 0 3 2528.2448 P17169 P17169 461 482 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 1.6563E-17 82.037 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 136330000 3806600 8004500 0 0 45911000 58181000 3661900 16761000 621 288 669 3634;3635;3636;3637;3638;3639;3640;3641;3642 2653;2654;2655;2656;2657;2658;2659;2660;2661 2656 9 58488000 122070000 0 0 706850000 881820000 28183000 96191000 DFTFEAAHR ______________________________ STTLFKDFTFEAAHRLPHVPEGHKCGRLHG K D F H R L 2 1 0 1 0 0 1 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 9 0 1 2 1092.4989 P65870 P65870 9 17 queD 6-carboxy-5,6,7,8-tetrahydropterin synthase yes yes 2 1.9837E-06 110.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25850000 8706900 5484500 0 0 5471800 6187000 0 0 622 399 670 3643;3644;3645;3646 2662;2663;2664;2665 2662 4 8706900 5613900 0 0 6600700 6853800 0 0 DFVHAVKP NNTPIFFIQDAHKFPDFVHAVKPEPHWAIP QDAHKFPDFVHAVKPEPHWAIPQGQSAHDT P D F K P E 1 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 2 0 0 8 1 0 1 911.4865 P21179 P21179 216 223 katE Catalase HPII yes yes 2 0.009707 69.998 By MS/MS 1 0 0 0 0 0 0 0 0 0 623 293 671 3647 2666 2666 1 0 0 0 0 0 0 0 0 DGAEILIDR NPQSVTRTLSARYYKDGAEILIDRGWDMAT SARYYKDGAEILIDRGWDMATGEKDFDDPL K D G D R G 1 1 0 2 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1 1 1000.5189 P0AED9 P0AED9 370 378 dcm DNA-cytosine methyltransferase yes yes 2 0.0055253 76.679 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 125380000 39448000 35600000 1592500 1710700 0 44326000 0 2697700 624 235 672 3648;3649;3650;3651;3652;3653 2667;2668;2669 2669 0 39448000 36440000 13531000 12970000 0 49104000 0 15482000 DGAGHRPEELVIDR EGFKHEEIAKIVLFRDGAGHRPEELVIDRH RDGAGHRPEELVIDRHVIAVASDVPLNLDV R D G D R H 1 2 0 2 0 0 2 2 1 1 1 0 0 0 1 0 0 0 0 1 0 0 14 1 2 2 1562.7801 P32125 P32125 123 136 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 3;4 5.3172E-63 164.53 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 192990000 53591000 48488000 0 0 41864000 49049000 0 0 625 337 673 3654;3655;3656;3657;3658;3659 2670;2671;2672;2673;2674 2670 5 53591000 49633000 0 0 50501000 54336000 0 0 DGAIHAIA IEALKIVQKQRGWVPDGAIHAIADVLGIPA KQRGWVPDGAIHAIADVLGIPASDVEGVAT P D G I A D 3 0 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 2 766.39735 P0AFD1 P0AFD1 52 59 nuoE NADH-quinone oxidoreductase subunit E yes yes 2 0.012334 50.539 By MS/MS 1 0 0 0 0 0 0 0 0 0 626 244 674 3660 2675 2675 1 0 0 0 0 0 0 0 0 DGAYVTLR QLARSAGTYVQIVARDGAYVTLRLRSGEMR YVQIVARDGAYVTLRLRSGEMRKVEADCRA R D G L R L 1 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 8 0 0 1 893.46068 P60422 P60422 168 175 rplB 50S ribosomal protein L2 yes yes 2 4.4855E-12 133.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1396900000 400940000 419670000 0 0 289820000 286470000 0 0 627 379 675 3661;3662;3663;3664;3665 2676;2677;2678;2679;2680 2679 5 400940000 429580000 0 0 349610000 317340000 0 0 DGEIVGEGYHQR FTTHPNPNVGCVIVKDGEIVGEGYHQRAGE IVKDGEIVGEGYHQRAGEPHAEVHALRMAG K D G Q R A 0 1 0 1 0 1 2 3 1 1 0 0 0 0 0 0 0 0 1 1 0 0 12 0 2 0 1358.6215 P25539 P25539 34 45 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 3.5431E-36 158.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44373000 14798000 12164000 0 0 8025400 9385900 0 0 628 315 676 3666;3667;3668;3669 2681;2682;2683;2684 2684 4 14798000 12451000 0 0 9681000 10397000 0 0 DGEVIIVDEHTGR RAHALFTRDVDYIVKDGEVIIVDEHTGRTM VKDGEVIIVDEHTGRTMQGRRWSDGLHQAV K D G G R T 0 1 0 2 0 0 2 2 1 2 0 0 0 0 0 0 1 0 0 2 0 0 13 0 2 0 1438.7052 P10408 P10408 330 342 secA Protein translocase subunit SecA yes yes 2 0.0026084 51.092 By MS/MS 1 0 0 0 0 0 0 0 0 0 629 272 677 3670 2685 2685 1 0 0 0 0 0 0 0 0 DGGKLTLTNFHFTHYENGHA QSHFRHHLLMCRHLPDGGKLTLTNFHFTHY TLTNFHFTHYENGHAVEQRNLPDVASLYAV P D G H A V 1 0 2 1 0 0 1 3 3 0 2 1 0 2 0 0 3 0 1 0 0 0 20 1 1 0 2258.0505 P77567 P77567 211 230 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 4 0.002819 34.689 By MS/MS By MS/MS 1 1 9039800 0 0 0 0 3861600 5178200 0 0 630 436 678 3671;3672 2686;2687 2687 2 0 0 0 0 5497700 7381500 0 0 DGGTHLAGFR FQENIYCFTNNIPQRDGGTHLAGFRAAMTR NIPQRDGGTHLAGFRAAMTRTLNAYMDKEG R D G F R A 1 1 0 1 0 0 0 3 1 0 1 0 0 1 0 0 1 0 0 0 0 0 10 0 0 1 1029.4992 P0AES6 P0AES6 277 286 gyrB DNA gyrase subunit B yes yes 2 3.7689E-05 104.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 66687000 22074000 17801000 0 0 15442000 11370000 0 0 631 239 679 3673;3674;3675;3676 2688;2689;2690;2691 2690 4 22074000 18221000 0 0 18628000 12596000 0 0 DGIASAILPGR ALRASGLEVSENAIRDGIASAILPGRFQIV NAIRDGIASAILPGRFQIVSESPRVIFDVA R D G G R F 2 1 0 1 0 0 0 2 0 2 1 0 0 0 1 1 0 0 0 0 0 0 11 0 0 3 1068.5928 P08192 P08192 279 289 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 2 4.9439E-05 112.84 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28914000 7146200 8154300 0 0 5953300 7660200 0 0 632 59 680 3677;3678;3679;3680 2692;2693;2694;2695 2695 3 7146200 8346700 0 0 7181500 8485800 0 0 DGIEALYR LIDGGKQKRCFTDIRDGIEALYRIIENAGN RCFTDIRDGIEALYRIIENAGNRCDGEIIN R D G Y R I 1 1 0 1 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1 1 935.47125 P77398 P77398 542 549 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 3.1304E-12 133.79 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 2 1 1 2 2 1 1 5451100000 1542400000 1084800000 2233500 1766200 1071500000 1746000000 1087100 1267500 633 432 681 3681;3682;3683;3684;3685;3686;3687;3688;3689;3690;3691;3692 2696;2697;2698;2699;2700;2701;2702;2703 2699 8 1542400000 1110400000 18978000 13391000 1292600000 1934200000 8366200 7274100 DGINQVQCSVAEYPE LLTREGEIDIAKRIEDGINQVQCSVAEYPE DGINQVQCSVAEYPEAITYLLEQYDRVEAE E D G P E A 1 0 1 1 1 2 2 1 0 1 0 0 0 0 1 1 0 0 1 2 0 0 15 0 1 2 1707.741 P00579 P00579 125 139 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0064257 54.259 By MS/MS By MS/MS By MS/MS 1 1 1 13242000 0 0 0 5230700 0 0 3742400 4269200 634 27 682 3693;3694;3695 2704 2704 1 0 0 0 39657000 0 0 28802000 24500000 DGIPAVVER GHKQAYRIVDFKRNKDGIPAVVERLEYDPN DFKRNKDGIPAVVERLEYDPNRSANIALVL K D G E R L 1 1 0 1 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 2 0 0 9 0 1 2 954.51345 P60422 P60422 72 80 rplB 50S ribosomal protein L2 yes yes 2 0.0019212 82.452 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 578160000 116270000 114830000 0 0 158460000 188590000 0 0 635 379 683 3696;3697;3698;3699;3700;3701;3702;3703 2705;2706;2707 2705 3 125820000 133680000 0 0 194240000 210880000 0 0 DGISALQMDIK EDHLGDMDFKVAGSRDGISALQMDIKIEGI AGSRDGISALQMDIKIEGITKEIMQVALNQ R D G I K I 1 0 0 2 0 1 0 1 0 2 1 1 1 0 0 1 0 0 0 0 0 0 11 0 0 1 1189.6013 P05055 P05055 500 510 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.00019211 79.986 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37879000 9774300 7363700 0 0 8680100 12061000 0 0 636 48 684 3704;3705;3706;3707 2708;2709;2710;2711 2710 4 9774300 7537500 0 0 10471000 13361000 0 0 DGKEDHFHYEGGIK SFLNSGVSIRLRDKRDGKEDHFHYEGGIKA RDGKEDHFHYEGGIKAFVEYLNKNKTPIHP R D G I K A 0 0 0 2 0 0 2 3 2 1 0 2 0 1 0 0 0 0 1 0 0 0 14 1 2 0 1630.7376 P0AES6 P0AES6 210 223 gyrB DNA gyrase subunit B yes yes 3;4 5.5322E-40 148.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 164380000 40528000 35237000 0 0 44374000 44238000 0 0 637 239 685 3708;3709;3710;3711;3712;3713;3714;3715 2712;2713;2714;2715;2716;2717;2718;2719 2718 8 40528000 36068000 0 0 53528000 49005000 0 0 DGKKVRFFKSNSETIK NAATGKADRVGFRFEDGKKVRFFKSNSETI GKKVRFFKSNSETIK_______________ E D G I K - 0 1 1 1 0 0 1 1 0 1 0 4 0 2 0 2 1 0 0 1 0 0 16 4 1 0 1883.0265 P60624 P60624 89 104 rplX 50S ribosomal protein L24 yes yes 4 6.8496E-11 77.222 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 345230000 34748000 41116000 5872600 10124000 21336000 20077000 101180000 110780000 638 381 686 3716;3717;3718;3719;3720;3721;3722;3723 2720;2721;2722;2723;2724;2725 2721 6 533890000 627020000 49899000 76753000 328490000 304300000 778690000 635730000 DGNISLLSLPVAER RVLTIVHSDCALLERDGNISLLSLPVAERW RDGNISLLSLPVAERWLRQAQLTPGEAPVC R D G E R W 1 1 1 1 0 0 1 1 0 1 3 0 0 0 1 2 0 0 0 1 0 0 14 0 1 2 1482.8042 P23367 P23367 452 465 mutL DNA mismatch repair protein MutL yes yes 2 4.5492E-50 186.46 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 126590000 35975000 35747000 0 0 28932000 25405000 0 529070 639 302 687 3724;3725;3726;3727;3728 2726;2727;2728;2729;2730 2727 5 35975000 36590000 0 0 34900000 28143000 0 3036200 DGNKVDLYGK LLVAGTANAAEIYNKDGNKVDLYGKAVGLH EIYNKDGNKVDLYGKAVGLHYFSKGNGENS K D G G K A 0 0 1 2 0 0 0 2 0 0 1 2 0 0 0 0 0 0 1 1 0 0 10 1 0 0 1107.556 P02931 P02931 29 38 ompF Outer membrane protein F yes yes 2;3 0.0020782 72.434 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 32300000 5773400 5227300 0 0 10684000 10615000 0 0 640 38 688 3729;3730;3731;3732;3733;3734;3735;3736 2731;2732;2733;2734;2735 2733 4 5773400 5350700 0 0 12888000 11759000 0 0 DGSHRPAAEPTPPGAQPTAPGSLKAPDTRNE DSSEAKPGMDSLAPEDGSHRPAAEPTPPGA PTAPGSLKAPDTRNEKLNSLEDVRKGSENY E D G N E K 5 2 1 2 0 1 2 3 1 0 1 1 0 0 7 2 3 0 0 0 0 0 31 3 1 12 3121.5177 P21179 P21179 33 63 katE Catalase HPII yes yes 3;4;5 1.4192E-21 87.439 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 3 2 411600000 76309000 63721000 53222000 52362000 23213000 28703000 58551000 55517000 641 293 689 3737;3738;3739;3740;3741;3742;3743;3744;3745;3746;3747;3748;3749;3750;3751;3752;3753;3754;3755 2736;2737;2738;2739;2740;2741;2742;2743;2744;2745;2746;2747;2748;2749;2750;2751;2752 2751 17 1172500000 971750000 452220000 396990000 357380000 435040000 450620000 318600000 DGSQRHYDHAVSP ______________________________ LPDGSQRHYDHAVSPMDVALDIGPGLAKAC P D G S P M 1 1 0 2 0 1 0 1 2 0 0 0 0 0 1 2 0 0 1 1 0 0 13 1 0 1 1467.6491 P0A8M3 P0A8M3 8 20 thrS Threonine--tRNA ligase yes yes 3 0.018776 52.555 By MS/MS 1 7248800 0 0 0 0 0 7248800 0 0 642 147 690 3756 2753 2753 1 0 0 0 0 0 10333000 0 0 DGSVIRFDGNA LKAVVVRTKKGVRRPDGSVIRFDGNACVLL VRRPDGSVIRFDGNACVLLNNNSEQPIGTR P D G N A C 1 1 1 2 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 11 1 0 0 1149.5415 P0ADY3 P0ADY3 73 83 rplN 50S ribosomal protein L14 yes yes 2 2.7045E-69 175.91 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 437440000 44244000 45730000 0 0 205270000 142200000 0 0 643 228 691 3757;3758;3759;3760;3761 2754;2755;2756;2757;2758 2758 4 267080000 273690000 0 0 292240000 202700000 0 0 DGTGLQDE EAMDKVGKEGVITVEDGTGLQDELDVVEGM EGVITVEDGTGLQDELDVVEGMQFDRGYLS E D G D E L 0 0 0 2 0 1 1 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 0 0 0 833.34029 P0A6F5 P0A6F5 179 186 groL 60 kDa chaperonin yes yes 1 1.7098E-24 118.74 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 174840000 59719000 72278000 0 0 18321000 24524000 0 0 644 68 692 3762;3763;3764;3765 2759;2760 2759 1 917560000 1102300000 0 0 282060000 371700000 0 0 DGTLISEPPSDFQVDR ______________________________ GTLISEPPSDFQVDRFDKLAFEPGVIPELL R D G D R F 0 1 0 3 0 1 1 1 0 1 1 0 0 1 2 2 1 0 0 1 0 0 16 0 1 2 1774.8374 P06987 P06987 11 26 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 2.1762E-98 182.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 347510000 100580000 81903000 0 0 87071000 77953000 0 0 645 55 693 3766;3767;3768;3769 2761;2762;2763;2764;2765;2766;2767 2763 7 100580000 83836000 0 0 105030000 86355000 0 0 DGTLISEPPSDFQVDRFDK ______________________________ ISEPPSDFQVDRFDKLAFEPGVIPELLKLQ R D G D K L 0 1 0 4 0 1 1 1 0 1 1 1 0 2 2 2 1 0 0 1 0 0 19 1 1 2 2165.0277 P06987 P06987 11 29 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2;3 1.1418E-63 155.11 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 583080000 116700000 138700000 0 0 177530000 150150000 0 0 646 55 694 3770;3771;3772;3773;3774;3775;3776;3777 2768;2769;2770;2771;2772;2773;2774;2775 2770 8 116700000 141970000 0 0 214150000 166340000 0 0 DGVLFTPPFTSSALPGITR GYISEGAGENLFEVKDGVLFTPPFTSSALP FTPPFTSSALPGITRDAIIKLAKELGIEVR K D G T R D 1 1 0 1 0 0 0 2 0 1 2 0 0 2 3 2 3 0 0 1 0 0 19 0 0 4 1975.0415 P0AB80 P0AB80 205 223 ilvE Branched-chain-amino-acid aminotransferase yes yes 2 2.1681E-07 72.265 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 67726000 17182000 15368000 0 0 20752000 14424000 0 0 647 191 695 3778;3779;3780;3781 2776 2776 1 17182000 15731000 0 0 25033000 15978000 0 0 DGVLVDESPVSAPLDYLHGHGSLISGLE AKDLVVSLAYQVRTEDGVLVDESPVSAPLD LDYLHGHGSLISGLETALEGHEVGDKFDVA E D G L E T 1 0 0 3 0 0 2 4 2 1 5 0 0 0 2 4 0 0 1 3 0 0 28 0 1 3 2875.424 P0A9K9 P0A9K9 19 46 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 4.882E-54 121.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 11687000000 0 48545000 4436900 8905600 5331300000 6288900000 5295700 0 648 169 696 3782;3783;3784;3785;3786;3787;3788 2777;2778;2779 2779 3 0 740310000 37699000 67519000 82080000000 95300000000 40757000 0 DGVLVDESPVSAPLDYLHGHGSLISGLETALE AKDLVVSLAYQVRTEDGVLVDESPVSAPLD HGHGSLISGLETALEGHEVGDKFDVAVGAN E D G L E G 2 0 0 3 0 0 3 4 2 1 6 0 0 0 2 4 1 0 1 3 0 0 32 0 2 4 3289.6354 P0A9K9 P0A9K9 19 50 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 3.54E-40 107.82 By MS/MS By MS/MS 1 2 7471100000 0 0 0 0 4067400000 3403700000 0 0 649 169 697 3789;3790;3791 2780;2781;2782 2780 3 0 0 0 0 62621000000 51588000000 0 0 DGVSVAR NVVLDKSFGAPTITKDGVSVAREIELEDKF FGAPTITKDGVSVAREIELEDKFENMGAQM K D G A R E 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 2 0 0 7 0 0 1 702.36605 P0A6F5 P0A6F5 52 58 groL 60 kDa chaperonin yes yes 2 6.609E-45 163.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 560960000 144880000 137910000 16504000 18022000 100610000 94162000 22660000 26211000 650 68 698 3792;3793;3794;3795;3796;3797;3798;3799;3800 2783;2784;2785;2786;2787;2788;2789 2785 7 144880000 141170000 140230000 136640000 122080000 104310000 174400000 150420000 DHHVDVTYK ______________________________ AAVVTKDHHVDVTYKTLRSLKHGEALLKME K D H Y K T 0 0 0 2 0 0 0 0 2 0 0 1 0 0 0 0 1 0 1 2 0 0 9 0 0 0 1112.5251 P39451 P39451 9 17 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2;3 2.3588E-37 161.92 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 190690000 65138000 62407000 0 0 30567000 32580000 0 0 651 364 699 3801;3802;3803;3804;3805;3806;3807;3808;3809 2790;2791;2792;2793;2794;2795;2796;2797;2798;2799 2799 10 65138000 63880000 0 0 36873000 36092000 0 0 DHTLFAK RGTKFHAGANVGCGRDHTLFAKADGKVKFE GANVGCGRDHTLFAKADGKVKFEVKGPKNR R D H A K A 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 7 0 0 1 830.42865 P0A7L8 P0A7L8 56 62 rpmA 50S ribosomal protein L27 yes yes 2 5.2122E-35 162.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 126840000 30298000 38348000 0 0 32167000 26028000 0 0 652 112 700 3810;3811;3812;3813 2800;2801;2802;2803 2802 3 30298000 39253000 0 0 38803000 28833000 0 0 DHTNVLMHVQGYFR RQRVVVLLSHPANPRDHTNVLMHVQGYFRP RDHTNVLMHVQGYFRPHIDSTERQQLAALI R D H F R P 0 1 1 1 0 1 0 1 2 0 1 0 1 1 0 0 1 0 1 2 0 0 14 0 0 0 1715.8202 P24252 P24252 91 104 ybgA Uncharacterized protein YbgA yes yes 3 1.6331E-09 82.069 By MS/MS 1 8154800 0 0 0 0 0 8154800 0 0 653 313 701 3814 2804 2804 1 0 0 0 0 0 9033700 0 0 DHTNVLMHVQGYFRPHIDSTER RQRVVVLLSHPANPRDHTNVLMHVQGYFRP HVQGYFRPHIDSTERQQLAALIDSYRRGEQ R D H E R Q 0 2 1 2 0 1 1 1 3 1 1 0 1 1 1 1 2 0 1 2 0 0 22 1 1 1 2651.2663 P24252 P24252 91 112 ybgA Uncharacterized protein YbgA yes yes 4 4.2855E-73 154.84 By matching By MS/MS By MS/MS 1 1 2 111470000 0 8479400 0 0 47045000 55944000 0 0 654 313 702;703 3815;3816;3817;3818 2805;2806;2807 2806 259 3 0 8679600 0 0 56751000 61974000 0 0 DHTTVLHACR TNHSLPEIGDAFGGRDHTTVLHACRKIEQL AFGGRDHTTVLHACRKIEQLREESHDIKED R D H C R K 1 1 0 1 1 0 0 0 2 0 1 0 0 0 0 0 2 0 0 1 0 0 10 0 0 1 1208.572 P03004 P03004 433 442 dnaA Chromosomal replication initiator protein DnaA yes yes 3 0.014215 30.612 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 8512800 2643300 2328600 0 0 1755200 1785700 0 0 655 40 704 3819;3820;3821;3822 2808;2809 2809 2 2643300 2383500 0 0 2117300 1978200 0 0 DHVLTALTTPDWTPGR EGYAKDYLLIDGQWRDHVLTALTTPDWTPG HVLTALTTPDWTPGR_______________ R D H G R - 1 1 0 2 0 0 0 1 1 0 2 0 0 0 2 0 4 1 0 1 0 0 16 0 0 3 1778.8951 P0A948 P0A948 179 194 rimJ Ribosomal-protein-alanine acetyltransferase yes yes 3 0.00055963 51.073 By MS/MS By MS/MS By MS/MS 1 1 1 13308000 2851700 4222100 0 0 0 6234200 0 0 656 159 705 3823;3824;3825 2810 2810 1 2851700 4321700 0 0 0 6906100 0 0 DIADAVTAAGVEVAK KAGDEGKLFGSIGTRDIADAVTAAGVEVAK DIADAVTAAGVEVAKSEVRLPNGVLRTTGE R D I A K S 5 0 0 2 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 15 0 1 5 1428.746 P0A7R1 P0A7R1 98 112 rplI 50S ribosomal protein L9 yes yes 2 6.4745E-12 125.54 By MS/MS By MS/MS By MS/MS 1 1 1 47904000 0 14759000 0 0 13160000 19985000 0 0 657 119 706 3826;3827;3828 2811;2812;2813;2814;2815;2816 2815 6 0 15107000 0 0 15875000 22139000 0 0 DIAELVPFAHR GPGFGARHNASNSLKDIAELVPFAHRYGAK NSLKDIAELVPFAHRYGAKIFVTLNTILHD K D I H R Y 2 1 0 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 0 1 0 0 11 0 1 3 1266.6721 P76104 P76104 50 60 ydcP Uncharacterized protease YdcP yes yes 2 1.2155E-07 133.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39513000 10493000 9772200 0 0 7340400 11907000 0 0 658 416 707 3829;3830;3831;3832 2817;2818;2819;2820 2818 4 10493000 10003000 0 0 8854800 13191000 0 0 DIAEQYK VAAIAALEGDQQCVRDIAEQYKRRRDVLVK EGDQQCVRDIAEQYKRRRDVLVKGLHEAGW R D I Y K R 1 0 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 1 1 865.41815 P77434 P77434 298 304 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 0.0035699 67.035 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 659 433 708 3833;3834 2821;2822 2821 2 0 0 0 0 0 0 0 0 DIAEQYKR VAAIAALEGDQQCVRDIAEQYKRRRDVLVK GDQQCVRDIAEQYKRRRDVLVKGLHEAGWM R D I K R R 1 1 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 1 1 1021.5193 P77434 P77434 298 305 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 9.7429E-18 140.98 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 86989000 27780000 22488000 1688900 2238500 14928000 13969000 1355700 2539400 660 433 709 3835;3836;3837;3838;3839;3840;3841;3842;3843 2823;2824;2825 2825 3 38512000 23019000 14350000 16971000 18008000 15475000 10433000 14573000 DIALTIHAHPTLHE LGEIGLAIEMGCDAEDIALTIHAHPTLHES EDIALTIHAHPTLHESVGLAAEVFEGSITD E D I H E S 2 0 0 1 0 0 1 0 3 2 2 0 0 0 1 0 2 0 0 0 0 0 14 0 0 3 1566.8154 P0A9P0 P0A9P0 437 450 lpdA Dihydrolipoyl dehydrogenase yes yes 3 0.000492 61.11 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21684000 5845400 7776500 0 0 3013000 5049000 0 0 661 172 710 3844;3845;3846;3847 2826;2827;2828 2826 3 89813000 118590000 0 0 46388000 76525000 0 0 DIAQKSKAE LDLDSIIAEVKAQNEDIAQKSKAEAESLYQ VKAQNEDIAQKSKAEAESLYQSKYEELQIT E D I A E A 2 0 0 1 0 1 1 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 9 2 0 2 988.51892 CON__P04264 CON__P04264 360 368 yes yes 2 0.0047927 71.501 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 123540000 0 0 9787000 14400000 319090 319030 44077000 54633000 + 662 9 711 3848;3849;3850;3851;3852;3853 2829 2829 1 0 0 83159000 109180000 4912700 4835400 339230000 313530000 DIAQKSKAEAE LDLDSIIAEVKAQNEDIAQKSKAEAESLYQ AQNEDIAQKSKAEAESLYQSKYEELQITAG E D I A E S 3 0 0 1 0 1 2 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 11 2 1 3 1188.5986 CON__P04264 CON__P04264 360 370 yes yes 2;3 7.6818E-07 103.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 2 2 390380000 16209000 15615000 38628000 5921700 24259000 24682000 102860000 162210000 + 663 9 712 3854;3855;3856;3857;3858;3859;3860;3861;3862;3863;3864;3865;3866;3867;3868 2830;2831;2832;2833;2834;2835;2836;2837;2838 2830 9 249040000 238120000 328220000 44895000 373490000 374100000 791610000 930900000 DIDTLISNNALWSK ______________________________ KDIDTLISNNALWSKMLVEEDPGFFEKLAQ K D I S K M 1 0 2 2 0 0 0 0 0 2 2 1 0 0 0 2 1 1 0 0 0 0 14 0 0 1 1588.8097 P61517 P61517 3 16 can Carbonic anhydrase 2 yes yes 2 1.9466E-107 190.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 154390000 30944000 33369000 0 0 36726000 53353000 0 0 664 386 713 3869;3870;3871;3872;3873;3874 2839;2840;2841;2842 2840 4 30944000 34156000 0 0 44388000 59318000 0 0 DIEADTPAR DGRHAHDYDYVHRVRDIEADTPARYNADPD YVHRVRDIEADTPARYNADPDRLFESSGCA R D I A R Y 2 1 0 2 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 9 0 1 3 986.46689 P06149 P06149 234 242 dld D-lactate dehydrogenase yes yes 2 0.0020909 73.248 By MS/MS By MS/MS 1 1 4597100 2243700 0 0 0 2353500 0 0 0 665 50 714 3875;3876 2843;2844 2844 2 2243700 0 0 0 2839000 0 0 0 DIENQYETQITQIEHEVSSSGQEVQSSAK DMRQEYEQLIAKNRKDIENQYETQITQIEH HEVSSSGQEVQSSAKEVTQLRHGVQELEIE K D I A K E 1 0 1 1 0 5 5 1 1 3 0 1 0 0 0 5 2 0 1 2 0 0 29 0 5 1 3263.5066 CON__P35527 CON__P35527 340 368 yes yes 3;4 0 291.79 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 1 1459500000 188320000 188750000 0 0 462050000 620390000 0 0 + 666 15 715 3877;3878;3879;3880;3881;3882;3883;3884;3885 2845;2846;2847;2848;2849 2845 5 188320000 193210000 0 0 557370000 687250000 0 0 DIFNQVETGQADYAVVP RHFEQFIESGCAKFADIFNQVETGQADYAV FNQVETGQADYAVVPIENTSSGAINDVYDL A D I V P I 2 0 1 2 0 2 1 1 0 1 0 0 0 1 1 0 1 0 1 3 0 0 17 0 1 2 1864.8843 P0A9J8 P0A9J8 141 157 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 2.0648E-35 121.02 By matching By MS/MS By MS/MS 1 1 1 13962000 163970 0 0 0 6692900 7104800 0 0 667 166 716 3886;3887;3888 2850;2851 2850 2 2519300 0 0 0 9528600 10128000 0 0 DIGAQYIIIGHSER LSGAFTGETSAAMLKDIGAQYIIIGHSERR KDIGAQYIIIGHSERRTYHKESDELIAKKF K D I E R R 1 1 0 1 0 1 1 2 1 4 0 0 0 0 0 1 0 0 1 0 0 0 14 0 1 1 1570.8104 P0A858 P0A858 85 98 tpiA Triosephosphate isomerase yes yes 2;3 1.3249E-76 204.49 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 259870000 59473000 65046000 0 0 70697000 64649000 0 0 668 139 717 3889;3890;3891;3892;3893;3894;3895;3896 2852;2853;2854;2855;2856;2857;2858;2859 2857 8 59473000 66581000 0 0 85282000 71617000 0 0 DIGGLETNR LMVWAAGIKAPDFLKDIGGLETNRINQLVV APDFLKDIGGLETNRINQLVVEPTLQTTRD K D I N R I 0 1 1 1 0 0 1 2 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1 0 973.48287 P00393 P00393 284 292 ndh NADH dehydrogenase yes yes 2 0.0046222 58.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37879000 11886000 8088100 0 0 8950500 8953500 0 0 669 25 718 3897;3898;3899;3900 2860;2861;2862;2863 2862 4 11886000 8279000 0 0 10797000 9918500 0 0 DIGIMDGDLLAVHK PNADFLLRVSGMSMKDIGIMDGDLLAVHKT KDIGIMDGDLLAVHKTQDVRNGQVVVARID K D I H K T 1 0 0 3 0 0 0 2 1 2 2 1 1 0 0 0 0 0 0 1 0 0 14 0 0 1 1495.7705 P0A7C2 P0A7C2 122 135 lexA LexA repressor yes yes 3 0.0050309 36.77 By MS/MS By MS/MS By matching By matching 1 1 1 1 11745000 3287000 3447800 0 0 2276800 2733400 0 0 670 101 719 3901;3902;3903;3904 2864;2865 2864 2 3287000 3529200 0 0 2746500 3028000 0 0 DIHGAPVGDTLTLAR ELKCGEVGWLVCAIKDIHGAPVGDTLTLAR DIHGAPVGDTLTLARNPAEKALPGFKKVKP K D I A R N 2 1 0 2 0 0 0 2 1 1 2 0 0 0 1 0 2 0 0 1 0 0 15 0 0 3 1534.8104 P60785 P60785 264 278 lepA Elongation factor 4 yes yes 3 7.0739E-10 72.321 By MS/MS By MS/MS 1 1 9750200 5982000 0 0 0 3768100 0 0 0 671 384 720 3905;3906 2866;2867 2867 0 5982000 0 0 0 4545500 0 0 0 DIHTLQWVAR YNLEPDIKSSPGGLRDIHTLQWVARRHFGA PGGLRDIHTLQWVARRHFGATSLDEMVGFG R D I A R R 1 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 1 1 0 1 0 0 10 0 0 1 1237.6568 P27249 P27249 228 237 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 0.0012034 77.318 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 202430000 46649000 69207000 0 0 39098000 47474000 0 0 672 320 721 3907;3908;3909;3910;3911;3912;3913;3914 2868;2869;2870;2871;2872;2873;2874;2875 2872 8 46649000 70840000 0 0 47164000 52591000 0 0 DIHTSTLELFEK VVTSDTRIIAGAKARDIHTSTLELFEKVLG KARDIHTSTLELFEKVLGPTTTTLAWKKAR R D I E K V 0 0 0 1 0 0 2 0 1 1 2 1 0 1 0 1 2 0 0 0 0 0 12 0 2 0 1431.7246 P42596 P42596 146 157 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2;3 2.8054E-160 259.1 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 796370000 230100000 230190000 0 0 155390000 180700000 0 0 673 366 722 3915;3916;3917;3918;3919;3920;3921;3922 2876;2877;2878;2879;2880;2881;2882 2877 7 230100000 235620000 0 0 187450000 200170000 0 0 DIKPANVFITATGIVK CSAVEHMHSRRVMHRDIKPANVFITATGIV IKPANVFITATGIVKLGDLGLGRFFSSETT R D I V K L 2 0 1 1 0 0 0 1 0 3 0 2 0 1 1 0 2 0 0 2 0 0 16 1 0 3 1685.9716 GST-Nek6 GST-Nek6 403 418 yes yes 2;3 1.3797E-22 140.84 By MS/MS By MS/MS 2 2 1228900000 0 0 0 0 485600000 743330000 0 0 674 23 723 3923;3924;3925;3926 2883;2884;2885 2884 3 0 0 0 0 585780000 823440000 0 0 DILNPANK AASGRPGPVVVDLPKDILNPANKLPYVWPE VVVDLPKDILNPANKLPYVWPESVSMRSYN K D I N K L 1 0 2 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 8 0 0 2 883.47633 P00893 P00893 164 171 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 2.5234E-07 118.01 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 2 1 1 88969000 16217000 17752000 1802100 1640900 22926000 23028000 3072000 2531800 675 29 724 3927;3928;3929;3930;3931;3932;3933;3934;3935;3936 2886;2887;2888;2889 2887 4 16217000 18171000 15312000 12441000 27655000 25510000 23643000 14529000 DILRAVAEQGYREP ______________________________ PDILRAVAEQGYREPTPIQQQAIPAVLEGR P D I E P T 2 2 0 1 0 1 2 1 0 1 1 0 0 0 1 0 0 0 1 1 0 0 14 2 2 2 1615.8318 P25888 P25888 11 24 rhlE ATP-dependent RNA helicase RhlE yes yes 3 0.012152 38.799 By matching By MS/MS By MS/MS 1 1 1 5261600 0 1866800 0 0 1939200 1455600 0 0 676 318 725 3937;3938;3939 2890 2890 1 0 1910800 0 0 2760800 2075000 0 0 DILREWREK DAVILDLTLPGMDGRDILREWREKGQREPV PGMDGRDILREWREKGQREPVLILTARDAL R D I E K G 0 2 0 1 0 0 2 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 9 2 2 0 1243.6673 P52076 P52076 61 69 qseB Transcriptional regulatory protein QseB yes yes 2 0.0033621 40.103 By MS/MS 1 0 0 0 0 0 0 0 0 0 677 374 726 3940 2891 2891 1 0 0 0 0 0 0 0 0 DINEHLIVELYSK EGTFKRKPERSDLSADINEHLIVELYSK__ SADINEHLIVELYSK_______________ A D I S K - 0 0 1 1 0 0 2 0 1 2 2 1 0 0 0 1 0 0 1 1 0 0 13 0 2 0 1571.8195 P0A7V8 P0A7V8 194 206 rpsD 30S ribosomal protein S4 yes yes 2;3 3.4904E-13 113.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 26842000 570050 408710 0 0 16591000 9272300 0 0 678 130 727 3941;3942;3943;3944;3945;3946 2892;2893;2894;2895 2894 4 3441100 2446100 0 0 23620000 13218000 0 0 DIQDPEVIK LVRQHLLMSVTAQRRDIQDPEVIKQFAEEV VTAQRRDIQDPEVIKQFAEEVQTENRLRYL R D I I K Q 0 0 0 2 0 1 1 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 9 0 1 1 1055.5499 P27249 P27249 567 575 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.00011351 104.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 113450000 30773000 23153000 0 0 26281000 33242000 0 0 679 320 728 3947;3948;3949;3950 2896;2897;2898;2899 2899 4 30773000 23699000 0 0 31703000 36825000 0 0 DIRDITLSHKE KANHYCDPATHHFNEDIRDITLSHKEGVSD HFNEDIRDITLSHKEGVSDEAAAEHIRQHI E D I K E G 0 1 0 2 0 0 1 0 1 2 1 1 0 0 0 1 1 0 0 0 0 0 11 2 0 0 1325.6939 P0AED9 P0AED9 140 150 dcm DNA-cytosine methyltransferase yes yes 3 0.0058018 48.659 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 17600000 2778100 2510100 4786100 0 1329100 1326100 4870500 0 680 235 729 3951;3952;3953;3954;3955;3956 2900;2901 2900 2 42684000 38279000 40667000 0 20462000 20099000 37485000 0 DISECFPAQR GFRRDLNLKADFTLRDISECFPAQRVTLAQ DFTLRDISECFPAQRVTLAQLLDPMVEAKY R D I Q R V 1 1 0 1 1 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 10 0 1 2 1221.5448 P0AED9 P0AED9 298 307 dcm DNA-cytosine methyltransferase yes yes 2 2.4573E-10 119.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40591000 10387000 9848700 0 0 11924000 8430800 0 0 681 235 730 3957;3958;3959;3960 2902;2903;2904;2905 2903 4 10387000 10081000 0 0 14384000 9339400 0 0 DISFEAPNAPHVFQK NNTEMTFQIQRIYTKDISFEAPNAPHVFQK DISFEAPNAPHVFQKDWQPEVKLDLDTASS K D I Q K D 2 0 1 1 0 1 1 0 1 1 0 1 0 2 2 1 0 0 0 1 0 0 15 0 1 4 1698.8366 P0AG86 P0AG86 20 34 secB Protein-export protein SecB yes yes 3 0.0019708 42.317 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 32788000 5761700 7245500 0 0 7791900 11989000 0 0 682 262 731 3961;3962;3963;3964;3965;3966 2906;2907;2908 2908 3 5761700 7416500 0 0 9880000 14226000 0 0 DITAEFLVK LHQQYKEASEVKPPRDITAEFLVKSKHRDL EVKPPRDITAEFLVKSKHRDLTALCKEYDE R D I V K S 1 0 0 1 0 0 1 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 9 0 1 1 1034.5648 LSD1-FL-His LSD1-FL-His 475 483 yes yes 1;2 2.6591E-177 202.28 By MS/MS By MS/MS By MS/MS By MS/MS 5 18 16 4 9486000000 4529600000 357120000 0 0 428280000 4171000000 0 0 683 24 732 3967;3968;3969;3970;3971;3972;3973;3974;3975;3976;3977;3978;3979;3980;3981;3982;3983;3984;3985;3986;3987;3988;3989;3990;3991;3992;3993;3994;3995;3996;3997;3998;3999;4000;4001;4002;4003;4004;4005;4006;4007;4008;4009 2909;2910;2911;2912;2913;2914;2915;2916;2917;2918;2919;2920;2921;2922;2923;2924;2925;2926;2927;2928;2929;2930;2931;2932;2933;2934;2935;2936;2937;2938;2939;2940;2941;2942;2943;2944;2945;2946;2947;2948;2949;2950;2951;2952;2953;2954;2955;2956;2957;2958;2959;2960 2922 50 4804400000 447630000 0 0 846080000 4766500000 0 0 DITLSHK HYCDPATHHFNEDIRDITLSHKEGVSDEAA HHFNEDIRDITLSHKEGVSDEAAAEHIRQH R D I H K E 0 0 0 1 0 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 7 0 0 0 812.43922 P0AED9 P0AED9 143 149 dcm DNA-cytosine methyltransferase yes yes 2 0.0041759 71.715 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 163430000 52272000 47452000 0 0 33175000 30534000 0 0 684 235 733 4010;4011;4012;4013 2961;2962;2963;2964 2961 3 52272000 48572000 0 0 40019000 33825000 0 0 DITLTSTCEHHFVTIDGK LIENKMKVDEMVTVRDITLTSTCEHHFVTI LTSTCEHHFVTIDGKATVAYIPKDSVIGLS R D I G K A 0 0 0 2 1 0 1 1 2 2 1 1 0 1 0 1 4 0 0 1 0 0 18 0 1 0 2072.9837 P0A6T5 P0A6T5 104 121 folE GTP cyclohydrolase 1 yes yes 3 0.00031938 46.621 By MS/MS By matching By matching 1 1 1 23492000 9859000 5944000 0 0 7689400 0 0 0 685 81 734 4014;4015;4016 2965 2965 1 9859000 6084300 0 0 9275800 0 0 0 DITSQLRDAVLNR HYFRDKNGLLEATMRDITSQLRDAVLNRLH MRDITSQLRDAVLNRLHALPQGSAEQRLQA R D I N R L 1 2 1 2 0 1 0 0 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 1 0 1 1499.8056 P17446 P17446 63 75 betI HTH-type transcriptional regulator BetI yes yes 3 0.0019432 51.774 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 686 289 735 4017;4018;4019;4020 2966;2967;2968 2967 24 0 0 0 0 0 0 0 0 0 DIVYVHQVA ELVSMCIYPDPDHRPDIVYVHQVARQMHVW DPDHRPDIVYVHQVARQMHVWTSST_____ P D I V A R 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 3 0 0 9 0 0 0 1042.5447 GST-Nek6 GST-Nek6 526 534 yes yes 2 6.5777E-05 111.29 By MS/MS By MS/MS 1 1 245370000 0 0 0 0 68527000 176840000 0 0 687 23 736 4021;4022 2969;2970 2969 1 0 0 0 0 97561000 252090000 0 0 DKAINHDFR AGFLDLEKSRRRLRRDKAINHDFRQLEKYL RRRLRRDKAINHDFRQLEKYLEPIPKADWE R D K F R Q 1 1 1 2 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 9 1 0 1 1114.552 P27294 P27294 184 192 inaA Protein InaA yes yes 2;3 0.0081117 60.828 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 41593000 14214000 15152000 0 0 6535700 5690600 0 0 688 321 737 4023;4024;4025;4026;4027;4028;4029 2971;2972;2973;2974 2971 4 20661000 15510000 0 0 7884000 6303900 0 0 DKFENMGAQMVKE ITKDGVSVAREIELEDKFENMGAQMVKEVA LEDKFENMGAQMVKEVASKANDAAGDGTTT E D K K E V 1 0 1 1 0 1 2 1 0 0 0 2 2 1 0 0 0 0 0 1 0 0 13 2 1 1 1525.6905 P0A6F5 P0A6F5 64 76 groL 60 kDa chaperonin yes yes 2;3 9.5649E-55 167.71 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 6 3 4 6 6 6 402810000 1897100 1696600 80831000 57003000 46556000 56810000 72317000 85702000 689 68 738;739;740 4030;4031;4032;4033;4034;4035;4036;4037;4038;4039;4040;4041;4042;4043;4044;4045;4046;4047;4048;4049;4050;4051;4052;4053;4054;4055;4056;4057;4058;4059;4060;4061;4062;4063 2975;2976;2977;2978;2979;2980;2981;2982;2983;2984;2985;2986;2987;2988;2989;2990;2991;2992;2993;2994;2995;2996 2986 78;79 22 29148000 25873000 686810000 432170000 716780000 861050000 556570000 491830000 DKLVSSEVK VSVKVPDPKFSSQTKDKLVSSEVKSAVEQQ FSSQTKDKLVSSEVKSAVEQQMNELLAEYL K D K V K S 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 0 2 0 0 9 1 1 0 1003.555 P0AES6 P0AES6 338 346 gyrB DNA gyrase subunit B yes yes 2 7.3738E-09 119.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75315000 24052000 24995000 0 0 12705000 13563000 0 0 690 239 741 4064;4065;4066;4067 2997;2998;2999;3000 2997 4 24052000 25585000 0 0 15326000 15025000 0 0 DKNIPIR IGNEERIRMVVDCARDKNIPIRIGVNAGSL RMVVDCARDKNIPIRIGVNAGSLEKDLQEK R D K I R I 0 1 1 1 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 7 1 0 1 854.4974 P62620 P62620 127 133 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) yes yes 2 0.022979 57.471 By MS/MS By MS/MS 1 1 4530800 0 0 0 0 1992700 2538100 0 0 691 389 742 4068;4069 3001 3001 1 0 0 0 0 2403800 2811600 0 0 DKYEHHLLLK HLFPSHLPPRMKNWRDKYEHHLLLKMAGDG MKNWRDKYEHHLLLKMAGDGVGEAKSWLVD R D K L K M 0 0 0 1 0 0 1 0 2 0 3 2 0 0 0 0 0 0 1 0 0 0 10 1 1 0 1294.7034 P06149 P06149 386 395 dld D-lactate dehydrogenase yes yes 3 0.022685 27.047 By matching By matching By matching By MS/MS 1 1 1 1 14751000 3238400 4506000 0 0 3358100 3648900 0 0 692 50 743 4070;4071;4072;4073 3002 3002 1 3238400 4612400 0 0 4050900 4042200 0 0 DLAHHQQLSQER QEMTARYQLWHQSCRDLAHHQQLSQERAAR SCRDLAHHQQLSQERAARAELLQYQLKELN R D L E R A 1 1 0 1 0 3 1 0 2 0 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1 1 1460.712 P05824 P05824 172 183 recN DNA repair protein RecN yes yes 2;3 1.4238E-36 152.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 126050000 31349000 51375000 0 0 25241000 18084000 0 0 693 49 744 4074;4075;4076;4077;4078;4079;4080 3003;3004;3005;3006;3007;3008 3005 6 31349000 52588000 0 0 30448000 20033000 0 0 DLANDGYR VTVIEVEANRVTQVKDLANDGYRAIQVTTG NRVTQVKDLANDGYRAIQVTTGAKKANRVT K D L Y R A 1 1 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 0 1 922.41446 P60438 P60438 39 46 rplC 50S ribosomal protein L3 yes yes 2 4.0598E-47 134.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 147700000 33057000 39702000 0 0 41478000 33465000 0 0 694 380 745 4081;4082;4083;4084 3009;3010;3011;3012 3010 2 33057000 40639000 0 0 50035000 37072000 0 0 DLDRDTAR RKIIKEIGRGKNHARDLDRDTARGLYAHML RGKNHARDLDRDTARGLYAHMLNGEVPDLE R D L A R G 1 2 0 3 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 8 1 0 1 960.46247 P30177 P30177 19 26 ybiB Uncharacterized protein YbiB yes yes 2 0.0033644 72.485 By MS/MS 1 0 0 0 0 0 0 0 0 0 695 332 746 4085 3013 3013 1 0 0 0 0 0 0 0 0 DLDTIANEPLHYDWEALR TTYAKGILPIDTYKKDLDTIANEPLHYDWE TIANEPLHYDWEALRESIKTHGLRNSTLSA K D L L R E 2 1 1 3 0 0 2 0 1 1 3 0 0 0 1 0 1 1 1 0 0 0 18 0 2 3 2170.0331 P00452;P00452-2 P00452 586 603 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 3 1.9906E-24 99.569 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 24826000 6348700 9021200 0 0 3253900 6201800 0 0 696 26 747 4086;4087;4088;4089 3014;3015;3016 3016 3 6348700 9234100 0 0 3925200 6870200 0 0 DLDVTATNR TIHGWAYGIHDGLLRDLDVTATNRETLEQR HDGLLRDLDVTATNRETLEQRYRHGISNLK R D L N R E 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 9 0 0 1 1003.4934 P61517 P61517 190 198 can Carbonic anhydrase 2 yes yes 2 3.4413E-14 134.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1235000000 327540000 347020000 0 0 278410000 282060000 0 0 697 386 748 4090;4091;4092;4093 3017;3018;3019;3020 3020 4 327540000 355210000 0 0 335840000 312460000 0 0 DLEHPIEVPVGK AMGSSDGLRRGLDVKDLEHPIEVPVGKATL DVKDLEHPIEVPVGKATLGRIMNVLGEPVD K D L G K A 0 0 0 1 0 0 2 1 1 1 1 1 0 0 2 0 0 0 0 2 0 0 12 0 2 2 1331.7085 P0ABB4 P0ABB4 71 82 atpD ATP synthase subunit beta yes yes 3 0.00017633 68.676 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50823000 11272000 9086200 0 0 14955000 15509000 0 0 698 194 749 4094;4095;4096;4097 3021;3022;3023;3024 3024 4 11272000 9300700 0 0 18041000 17181000 0 0 DLETQSQDGTFDK LTNWKTVRQSIKRLKDLETQSQDGTFDKLT LKDLETQSQDGTFDKLTKKEALMRTRELEK K D L D K L 0 0 0 3 0 2 1 1 0 0 1 1 0 1 0 1 2 0 0 0 0 0 13 0 1 0 1482.6474 P0A7V0 P0A7V0 116 128 rpsB 30S ribosomal protein S2 yes yes 2 1.0076E-183 227.94 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 72815000 18380000 20725000 0 0 14918000 18793000 0 0 699 128 750 4098;4099;4100;4101;4102 3025;3026;3027;3028 3027 4 20017000 21214000 0 0 17995000 20818000 0 0 DLFGSEDDALFLSK GRNAVAWIEHWLDLRDLFGSEDDALFLSKL RDLFGSEDDALFLSKLGKRISARNVQKRFA R D L S K L 1 0 0 3 0 0 1 1 0 0 3 1 0 2 0 2 0 0 0 0 0 0 14 0 1 1 1555.7406 P0A8P6 P0A8P6 197 210 xerC Tyrosine recombinase XerC yes yes 2 4.9808E-61 143.97 By MS/MS By MS/MS 1 1 65184000 0 65184000 0 0 0 0 0 0 700 150 751 4103;4104 3029;3030 3030 2 0 66722000 0 0 0 0 0 0 DLFPQIGQR ______________________________ VLRPYRDLFPQIGQRVMIDDSSVVIGDVRL R D L Q R V 0 1 0 1 0 2 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 0 1 1072.5665 P0A9W9 P0A9W9 10 18 yrdA Protein YrdA yes yes 2 0.00012718 117.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 364200000 71517000 80240000 0 0 119330000 93112000 0 0 701 179 752 4105;4106;4107;4108 3031;3032;3033;3034;3035 3031 5 71517000 82134000 0 0 143940000 103150000 0 0 DLGFNVEVQPVPGTR QSNADLITLLADWFKDLGFNVEVQPVPGTR DLGFNVEVQPVPGTRNKFNMLASIGQGAGG K D L T R N 0 1 1 1 0 1 1 2 0 0 1 0 0 1 2 0 1 0 0 3 0 0 15 0 1 2 1626.8366 P23908 P23908 45 59 argE Acetylornithine deacetylase yes yes 2 1.1545E-91 213.73 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 242400000 44375000 40384000 0 0 74986000 82652000 0 0 702 308 753 4109;4110;4111;4112 3036;3037;3038;3039 3037 4 44375000 41337000 0 0 90456000 91560000 0 0 DLGQAKRVVINKDTTTIIDGVGE ISEEIGMELEKATLEDLGQAKRVVINKDTT VINKDTTTIIDGVGEEAAIQGRVAQIRQQI E D L G E E 1 1 1 3 0 1 1 3 0 3 1 2 0 0 0 0 3 0 0 3 0 0 23 3 0 1 2441.3126 P0A6F5 P0A6F5 316 338 groL 60 kDa chaperonin yes yes 3;4 6.1637E-48 121.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 2 2 309080000 15775000 25522000 20071000 32583000 72522000 60349000 21723000 60536000 703 68 754 4113;4114;4115;4116;4117;4118;4119;4120;4121;4122;4123;4124;4125;4126;4127 3040;3041;3042;3043;3044;3045;3046;3047;3048;3049;3050;3051 3046 12 242390000 389210000 170540000 247030000 1116500000 914670000 167180000 347410000 DLGQAKRVVINKDTTTIIDGVGEE ISEEIGMELEKATLEDLGQAKRVVINKDTT INKDTTTIIDGVGEEAAIQGRVAQIRQQIE E D L E E A 1 1 1 3 0 1 2 3 0 3 1 2 0 0 0 0 3 0 0 3 0 0 24 3 1 1 2570.3552 P0A6F5 P0A6F5 316 339 groL 60 kDa chaperonin yes yes 3;4 1.5774E-161 196.61 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 2 3 2 1232500000 56642000 48753000 64397000 122140000 337930000 296060000 73276000 233330000 704 68 755 4128;4129;4130;4131;4132;4133;4134;4135;4136;4137;4138;4139;4140;4141;4142;4143;4144;4145 3052;3053;3054;3055;3056;3057;3058;3059;3060;3061;3062;3063;3064;3065;3066;3067 3057 15 870280000 743490000 547170000 926040000 5202800000 4487200000 563950000 1339000000 DLIVDTSEMSVHELA IDKESDLLEPLRSRADLIVDTSEMSVHELA DLIVDTSEMSVHELAEMLRTRLLGKREREL A D L L A E 1 0 0 2 0 0 2 0 1 1 2 0 1 0 0 2 1 0 0 2 0 0 15 0 2 0 1657.7869 P0A894 P0A894 131 145 rapZ RNase adapter protein RapZ yes yes 2 0.005752 54.608 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 16450000 2028800 2137700 0 0 6558300 5724800 0 0 705 141 756;757 4146;4147;4148;4149;4150;4151;4152;4153 3068;3069 3069 2 12247000 12794000 0 0 9337000 8160700 0 0 DLKEAQQ GMSGIAPVLAGAHLEDLKEAQQ________ VLAGAHLEDLKEAQQ_______________ E D L Q Q - 1 0 0 1 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 1 1 1 830.4134 P33602 P33602 902 908 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0169 62.714 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 60688000 0 0 14217000 15024000 0 1887700 15165000 14396000 706 345 758 4154;4155;4156;4157;4158 3070;3071 3070 2 0 0 120800000 113900000 0 2091200 116710000 82615000 DLKTFSA TIAGTDPSGGAGIQADLKTFSALGAYGCSV SGGAGIQADLKTFSALGAYGCSVITALVAQ A D L S A L 1 0 0 1 0 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 7 1 0 0 780.40177 P76422 P76422 23 29 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 0.0018096 74.415 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12439000 797320 696140 0 0 6581500 4364000 0 0 707 425 759 4159;4160;4161;4162 3072 3072 1 4813000 4166400 0 0 9370000 6220900 0 0 DLLAPWVPDAPSR ______________________________ LRDLLAPWVPDAPSRALREMTLDSRVAAAG R D L S R A 2 1 0 2 0 0 0 0 0 0 2 0 0 0 3 1 0 1 0 1 0 0 13 0 0 5 1435.746 P22188 P22188 8 20 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase yes yes 2 0.0015822 49.3 By MS/MS 1 0 0 0 0 0 0 0 0 0 708 299 760 4163 3073 3073 1 0 0 0 0 0 0 0 0 DLLDNVQYAPAR IEIDAASRTKVEDTRDLLDNVQYAPARGRF DTRDLLDNVQYAPARGRFKVYLIDEVHMLS R D L A R G 2 1 1 2 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 12 0 0 3 1373.6939 P06710 P06710 106 117 dnaX DNA polymerase III subunit tau yes yes 2 2.1528E-34 157.96 By MS/MS By MS/MS By MS/MS 1 1 1 38811000 38811000 0 0 0 0 0 0 0 709 51 761 4164;4165;4166 3074;3075;3076 3076 3 38811000 0 0 0 0 0 0 0 DLLGITK RELEANGKVGATYSRDLLGITKASLATESF KVGATYSRDLLGITKASLATESFISAASFQ R D L T K A 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 7 0 0 0 758.4538 P0A8T7 P0A8T7 1305 1311 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0041759 66.993 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23380000 6715800 5764400 0 0 4707300 6193000 0 0 710 153 762 4167;4168;4169;4170 3077;3078;3079;3080 3078 4 6715800 5900400 0 0 5678400 6860500 0 0 DLLPLVEGCTVSTK GESSGPDVSREGVQRDLLPLVEGCTVSTKH RDLLPLVEGCTVSTKHGMVKTDHILFIASG R D L T K H 0 0 0 1 1 0 1 1 0 0 3 1 0 0 1 1 2 0 0 2 0 0 14 0 1 1 1530.7963 P0A6H5 P0A6H5 280 293 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0023801 69.979 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17031000 4955200 5874500 0 0 1993000 4208400 0 0 711 71 763 4171;4172;4173;4174 3081;3082;3083;3084 3081 4 4955200 6013200 0 0 2404200 4662000 0 0 DLMASAQTGTGK TPIQQQAIPAVLEGRDLMASAQTGTGKTAG EGRDLMASAQTGTGKTAGFTLPLLQHLITR R D L G K T 2 0 0 1 0 1 0 2 0 0 1 1 1 0 0 1 2 0 0 0 0 0 12 0 0 2 1178.5601 P25888 P25888 40 51 rhlE ATP-dependent RNA helicase RhlE yes yes 2 8.9022E-70 177.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 466950000 146780000 120670000 0 0 111720000 87782000 0 0 712 318 764;765;766 4175;4176;4177;4178;4179;4180;4181;4182;4183;4184 3085;3086;3087;3088;3089;3090;3091;3092;3093;3094;3095 3090 264 26 9 146780000 123520000 0 0 134760000 97243000 0 0 DLNELAEQNLILR ELVEHFSVSPQTIRRDLNELAEQNLILRHH RRDLNELAEQNLILRHHGGAALPSSSVNTP R D L L R H 1 1 2 1 0 1 2 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 13 0 2 1 1539.8257 P0ACL0 P0ACL0 39 51 glpR Glycerol-3-phosphate regulon repressor yes yes 2;3 0 275.84 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 561110000 180510000 150540000 0 0 127050000 103010000 0 0 713 215 767 4185;4186;4187;4188;4189;4190 3096;3097;3098;3099;3100;3101;3102 3096 6 180510000 154090000 0 0 153270000 114120000 0 0 DLNELQTQGK ALSEQLKVSKETIRRDLNELQTQGKILRNH ETIRRDLNELQTQGKILRNHGRAKYIHRQN R D L G K I 0 0 1 1 0 2 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 10 0 1 0 1144.5724 P0ACK8 P0ACK8 38 47 fucR L-fucose operon activator yes yes 2 3.9744E-76 183.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 86905000 25301000 25430000 0 0 21164000 15010000 0 0 714 214 768 4191;4192;4193;4194 3103;3104;3105;3106 3103 4 25301000 26031000 0 0 25530000 16628000 0 0 DLNIDPATLR GLCHSVQGTAEELARDLNIDPATLRYRCAG EELARDLNIDPATLRYRCAGINHMAFYLEL R D L L R Y 1 1 1 2 0 0 0 0 0 1 2 0 0 0 1 0 1 0 0 0 0 0 10 0 0 2 1126.5982 P06720 P06720 186 195 melA Alpha-galactosidase yes yes 2 0.0017163 80.165 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 31994000 9383000 7642000 1660800 0 5801300 7506900 0 0 715 52 769 4195;4196;4197;4198;4199 3107;3108;3109;3110 3110 4 9383000 7822300 14112000 0 6998100 8316000 0 0 DLQLLPIAGR SVLKLTGDVLNDDPRDLQLLPIAGRLKCAH NDDPRDLQLLPIAGRLKCAHVNHVEALCDA R D L G R L 1 1 0 1 0 1 0 1 0 1 3 0 0 0 1 0 0 0 0 0 0 0 10 0 0 2 1094.6448 P0ADM8 P0ADM8 165 174 yieE Uncharacterized protein YieE yes yes 2 0.0035127 59.245 By MS/MS 1 5776500 0 5776500 0 0 0 0 0 0 716 223 770 4200 3111 3111 1 0 5912800 0 0 0 0 0 0 DLQSIADYPVK LELIREHTTIVKHYRDLQSIADYPVKVRKL KHYRDLQSIADYPVKVRKLIRRLRRIRIDR R D L V K V 1 0 0 2 0 1 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 11 0 0 2 1247.6398 P23830 P23830 420 430 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.00028993 53.683 By MS/MS By MS/MS By MS/MS 1 1 1 5757400 0 671540 0 0 0 5085800 0 0 717 304 771 4201;4202;4203 3112;3113 3112 2 0 10241000 0 0 0 5634000 0 0 DLRPALK SLVVLDSAERTAGGKDLRPALKIVDAQGND AERTAGGKDLRPALKIVDAQGNDVLIPGTD K D L L K I 1 1 0 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 7 1 0 2 811.49159 P0A8T7 P0A8T7 1073 1079 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0072364 85.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 48393000 13094000 13642000 0 0 10281000 11375000 0 0 718 153 772 4204;4205;4206;4207 3114;3115;3116;3117 3117 3 13094000 13964000 0 0 12402000 12601000 0 0 DLSEAQVER SAHLASPKLPQRLPKDLSEAQVERLLQAPL PQRLPKDLSEAQVERLLQAPLIDQPLELRD K D L E R L 1 1 0 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 2 1 1045.504 P0A8P8 P0A8P8 112 120 xerD Tyrosine recombinase XerD yes yes 2 0.017828 50.607 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 582670000 137070000 191080000 0 0 125420000 129100000 0 0 719 151 773 4208;4209;4210;4211;4212;4213;4214;4215 3118 3118 0 197750000 279850000 0 0 164960000 172880000 0 0 DLSMMVEWLHHR LEKNLAENTLNAYRRDLSMMVEWLHHRGLT YRRDLSMMVEWLHHRGLTLATAQSDDLQAL R D L H R G 0 1 0 1 0 0 1 0 2 0 2 0 2 0 0 1 0 1 0 1 0 0 12 0 1 0 1552.7279 P0A8P8 P0A8P8 32 43 xerD Tyrosine recombinase XerD yes yes 3 6.2792E-08 101.39 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 393820000 123330000 104660000 0 0 91473000 74369000 0 0 720 151 774;775 4216;4217;4218;4219;4220;4221;4222;4223 3119;3120;3121;3122;3123;3124;3125;3126 3125 149 8 123330000 107130000 0 0 110340000 82384000 0 0 DLTALCK PRDITAEFLVKSKHRDLTALCKEYDELAET FLVKSKHRDLTALCKEYDELAETQGKLEEK R D L C K E 1 0 0 1 1 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 7 0 0 1 819.41604 LSD1-FL-His LSD1-FL-His 488 494 yes yes 2 5.3437E-07 90.661 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2277600000 531570000 545590000 0 0 538260000 662180000 0 0 721 24 776 4224;4225;4226;4227 3127;3128;3129 3128 1 531570000 558470000 0 0 649300000 733550000 0 0 DLTALCKEYDELAETQGK PRDITAEFLVKSKHRDLTALCKEYDELAET ALCKEYDELAETQGKLEEKLQELEANPPSD R D L G K L 2 0 0 2 1 1 3 1 0 0 3 2 0 0 0 0 2 0 1 0 0 0 18 1 3 2 2082.978 LSD1-FL-His LSD1-FL-His 488 505 yes yes 3 9.3063E-12 81.346 By MS/MS By MS/MS 1 1 16132000 9567800 6564600 0 0 0 0 0 0 722 24 777 4228;4229 3130;3131 3131 2 9567800 6719600 0 0 0 0 0 0 DLTKPAVLEVITPTQVR TAEQFAKGVQLHNEKDLTKPAVLEVITPTQ TKPAVLEVITPTQVRLTISEGRYHQVKRMF K D L V R L 1 1 0 1 0 1 1 0 0 1 2 1 0 0 2 0 3 0 0 3 0 0 17 1 1 3 1879.0779 P0AA43 P0AA43 159 175 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 6.6822E-46 158.93 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2112200000 534120000 439710000 0 0 534090000 604270000 0 0 723 183 778 4230;4231;4232;4233;4234;4235;4236;4237 3132;3133;3134;3135;3136;3137;3138;3139;3140;3141 3140 10 534120000 450090000 0 0 644280000 669400000 0 0 DLVAYRQAHE IEFANKHNMALVTIEDLVAYRQAHERKAS_ LVTIEDLVAYRQAHERKAS___________ E D L H E R 2 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 10 1 0 2 1200.5887 P0A7J0 P0A7J0 204 213 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2;3 0.00015776 100.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 3 2 2 571860000 15639000 9836200 137150000 124300000 21846000 12235000 108630000 142220000 724 105 779 4238;4239;4240;4241;4242;4243;4244;4245;4246;4247;4248;4249;4250;4251;4252;4253;4254;4255 3142;3143;3144;3145;3146;3147;3148;3149 3143 4 174480000 61014000 1165300000 942410000 272900000 117520000 836080000 816160000 DLVAYRQAHERKAS IEFANKHNMALVTIEDLVAYRQAHERKAS_ EDLVAYRQAHERKAS_______________ E D L A S - 3 2 0 1 0 1 1 0 1 0 1 1 0 0 0 1 0 0 1 1 0 0 14 3 1 3 1642.854 P0A7J0 P0A7J0 204 217 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 3;4 0.0078319 28.976 By matching By MS/MS By MS/MS By matching 1 2 2 1 10210000 0 997980 0 0 3902700 3778200 0 1530800 725 105 780 4256;4257;4258;4259;4260;4261 3150;3151 3150 2 0 15219000 0 0 60085000 57264000 0 8784800 DLVESAPAALK KAVRGATGLGLKEAKDLVESAPAALKEGVS KEAKDLVESAPAALKEGVSKDDAEALKKAL K D L L K E 3 0 0 1 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 0 11 0 1 4 1112.6077 P0A7K2 P0A7K2 86 96 rplL 50S ribosomal protein L7/L12 yes yes 2 5.7537E-10 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 81364000 0 16875000 0 0 41082000 23406000 0 0 726 108 781 4262;4263;4264;4265 3152;3153;3154;3155;3156 3152 5 0 17273000 0 0 49558000 25929000 0 0 DLVVSLAYQVR ______________________________ KVAKDLVVSLAYQVRTEDGVLVDESPVSAP K D L V R T 1 1 0 1 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 3 0 0 11 0 0 1 1261.703 P0A9K9 P0A9K9 6 16 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 8.5086E-13 102.61 By MS/MS By MS/MS By MS/MS By MS/MS 6 5 9 8 82469000 22140000 14280000 0 0 26394000 19656000 0 0 727 169 782 4266;4267;4268;4269;4270;4271;4272;4273;4274;4275;4276;4277;4278;4279;4280;4281;4282;4283;4284;4285;4286;4287;4288;4289;4290;4291;4292;4293 3157;3158;3159;3160;3161;3162;3163;3164;3165;3166;3167;3168;3169;3170;3171;3172;3173;3174;3175;3176 3160 20 56334000 33141000 0 0 227080000 91749000 0 0 DLYKRLIDMGEE LEVLQEPDNHHVSAEDLYKRLIDMGEEIGL SAEDLYKRLIDMGEEIGLATVYRVLNQFDD E D L E E I 0 1 0 2 0 0 2 1 0 1 2 1 1 0 0 0 0 0 1 0 0 0 12 2 1 0 1480.7232 P0A9A9 P0A9A9 38 49 fur Ferric uptake regulation protein yes yes 2;3 1.3145E-37 125.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 2 3 3 2 3 3 769100000 44998000 47960000 23115000 63418000 42952000 19656000 217250000 309750000 728 162 783;784 4294;4295;4296;4297;4298;4299;4300;4301;4302;4303;4304;4305;4306;4307;4308;4309;4310;4311;4312;4313;4314;4315;4316;4317 3177;3178;3179;3180;3181;3182;3183;3184;3185;3186;3187 3183 154 10 691380000 731400000 196400000 480810000 394050000 297920000 1672000000 1777600000 DMGGLPDALFVIDADHEHIAIK TRELEKLENSLGGIKDMGGLPDALFVIDAD ALFVIDADHEHIAIKEANNLGIPVFAIVDT K D M I K E 3 0 0 4 0 0 1 2 2 3 2 1 1 1 1 0 0 0 0 1 0 0 22 0 1 4 2376.1784 P0A7V0 P0A7V0 153 174 rpsB 30S ribosomal protein S2 yes yes 3;4 4.1503E-05 43.534 By matching By matching By MS/MS 2 1 2 55454000 0 17746000 0 0 16243000 21466000 0 0 729 128 785;786 4318;4319;4320;4321;4322 3188;3189 3188 123 2 0 18165000 0 0 19594000 23779000 0 0 DMGNVEK SDDDDSAHRLGEFTRDMGNVEKIELLPYHE HRLGEFTRDMGNVEKIELLPYHELGKHKWV R D M E K I 0 0 1 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 7 0 1 0 791.34835 P0A9N4 P0A9N4 190 196 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 0.0041693 67.035 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16221000 4993500 7368000 0 0 2067400 1792300 0 0 730 171 787 4323;4324;4325;4326 3190;3191 3190 1 4993500 7541900 0 0 2493900 1985400 0 0 DMVIGPVR VAALTIYDMCKAVQKDMVIGPVRLLAKSGG MCKAVQKDMVIGPVRLLAKSGGKSGDFKVE K D M V R L 0 1 0 1 0 0 0 1 0 1 0 0 1 0 1 0 0 0 0 2 0 0 8 0 0 1 885.47422 P0A738 P0A738 136 143 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 0.00045265 103.29 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 118370000 32813000 35099000 0 0 25053000 25410000 0 0 731 93 788;789 4327;4328;4329;4330;4331;4332;4333;4334 3192;3193;3194;3195;3196;3197;3198 3198 104 7 32813000 35927000 0 0 30221000 28148000 0 0 DNEIVAK TDSVANRRLAFARTRDNEIVAKLFNELGPR RLAFARTRDNEIVAKLFNELGPRFASRAGG R D N A K L 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 7 0 1 1 787.40758 P0AG44 P0AG44 72 78 rplQ 50S ribosomal protein L17 yes yes 2 0.02165 45.952 By MS/MS By matching By MS/MS 1 1 1 13568000 5851900 4699400 0 0 3016300 0 0 0 732 257 790 4335;4336;4337 3199 3199 1 5851900 4810400 0 0 3638500 0 0 0 DNEIYQFASIGEVNQDLK LKSHVVVNGHTKIGRDNEIYQFASIGEVNQ IYQFASIGEVNQDLKYAGEPTRVEIGDRNR R D N L K Y 1 0 2 2 0 2 2 1 0 2 1 1 0 1 0 1 0 0 1 1 0 0 18 0 2 1 2081.9906 P0A722 P0A722 59 76 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2 1.2943E-17 96.306 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 14340000 2030200 3424600 0 0 2867100 6018000 0 0 733 92 791 4338;4339;4340;4341 3200;3201 3201 2 2030200 3505500 0 0 3458500 6666600 0 0 DNESLSLSILR SHHVCPRCSGTGTVRDNESLSLSILRLIEE GTVRDNESLSLSILRLIEEEALKENTQEVH R D N L R L 0 1 1 1 0 0 1 0 0 1 3 0 0 0 0 3 0 0 0 0 0 0 11 0 1 0 1245.6565 P21513 P21513 415 425 rne Ribonuclease E yes yes 2 8.9936E-05 105.98 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 27056000 9637000 5634300 0 0 5251500 6533300 0 0 734 297 792 4342;4343;4344;4345 3202;3203;3204 3203 3 9637000 5767300 0 0 6334900 7237400 0 0 DNGNYEHDYEGA TVRHDMERFFLRTVPDNGNYEHDYEGADDM TVPDNGNYEHDYEGADDMPSHIKSSMLGTS P D N G A D 1 0 2 2 0 0 2 2 1 0 0 0 0 0 0 0 0 0 2 0 0 0 12 0 2 0 1382.5011 P0AF48 P0AF48 73 84 yjbQ UPF0047 protein YjbQ yes yes 2 0.0042578 57.859 By matching By MS/MS 1 1 8115400 0 0 0 0 1730200 6385200 0 0 735 243 793 4346;4347 3205 3205 1 0 0 0 0 2463200 9102100 0 0 DNKSLGQFNLDGINP AVTIHVLQGERKRAADNKSLGQFNLDGINP DNKSLGQFNLDGINPAPRGMPQIEVTFDID A D N N P A 0 0 3 2 0 1 0 2 0 1 2 1 0 1 1 1 0 0 0 0 0 0 15 1 0 0 1630.7951 P0A6Y8 P0A6Y8 450 464 dnaK Chaperone protein DnaK yes yes 2 4.2879E-27 122.42 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 64517000 4829700 6665500 0 0 18101000 34921000 0 0 736 86 794 4348;4349;4350;4351 3206 3206 1 29155000 39893000 0 0 25770000 49780000 0 0 DNQSAVTIHVLQGE TTIPTKHSQVFSTAEDNQSAVTIHVLQGER EDNQSAVTIHVLQGERKRAADNKSLGQFNL E D N G E R 1 0 1 1 0 2 1 1 1 1 1 0 0 0 0 1 1 0 0 2 0 0 14 0 0 1 1509.7423 P0A6Y8 P0A6Y8 431 444 dnaK Chaperone protein DnaK yes yes 2 1.4103E-19 119.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 160940000 0 0 29087000 28948000 0 14033000 34688000 54185000 737 86 795 4352;4353;4354;4355;4356 3207;3208;3209 3207 3 0 0 247150000 219470000 0 212690000 266960000 310960000 DNRIHAVSIKAYTP KKQQTVYGPLMEYIADNRIHAVSIKAYTPA ADNRIHAVSIKAYTPAEWARDRKLNGF___ A D N T P A 2 1 1 1 0 0 0 0 1 2 0 1 0 0 1 1 1 0 1 1 0 0 14 2 0 2 1583.842 P0A9W6 P0A9W6 59 72 ibaG Acid stress protein IbaG yes yes 3 0.0064105 48.527 By MS/MS By MS/MS By MS/MS 1 1 1 17371000 571080 0 0 0 9602500 7197700 0 0 738 178 796 4357;4358;4359 3210 3210 1 3447300 0 0 0 13671000 10260000 0 0 DNSLPVRKPSFLITNPGSNQGPRFAGSPLGHE LAEIAELSDKVTFKEDNSLPVRKPSFLITN SNQGPRFAGSPLGHEFTSLVLALLWTGGHP E D N H E F 1 2 3 1 0 1 1 4 1 1 3 1 0 2 5 4 1 0 0 1 0 0 32 3 0 6 3388.7276 P35340 P35340 55 86 ahpF Alkyl hydroperoxide reductase subunit F yes yes 4;5 5.5071E-83 136.14 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 1 2 233840000 5591400 0 9450400 7504800 53659000 48735000 5774500 103130000 739 348 797 4360;4361;4362;4363;4364;4365;4366;4367;4368;4369 3211;3212;3213;3214;3215;3216;3217;3218;3219;3220 3220 10 85911000 0 80299000 56898000 826130000 738650000 44442000 591840000 DNSLRMVQLFFP VMCHDAVEVLHKMIPDNSLRMVQLFFPDPW MIPDNSLRMVQLFFPDPWHKARHNKRRIVQ P D N F P D 0 1 1 1 0 1 0 0 0 0 2 0 1 2 1 1 0 0 0 1 0 0 12 1 0 0 1465.7388 P0A8I5 P0A8I5 132 143 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 0.011832 53.683 By matching By MS/MS By matching 1 1 1 15199000 0 0 0 0 8105000 6613700 0 480080 740 144 798 4370;4371;4372 3221 3221 1 0 0 0 0 11539000 9427800 0 2755100 DNVNHPLWVERIA VARLAAERGIPVYAPDNVNHPLWVERIAQL APDNVNHPLWVERIAQLSPDVIFSFYYRHL P D N I A Q 1 1 2 1 0 0 1 0 1 1 1 0 0 0 1 0 0 1 0 2 0 0 13 1 1 1 1561.8001 P77398 P77398 60 72 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.6335E-13 108.17 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 369680000 15886000 15255000 0 0 242270000 96269000 0 0 741 432 799 4373;4374;4375;4376;4377;4378;4379;4380 3222;3223;3224;3225;3226;3227 3225 4 95895000 91301000 0 0 344910000 137230000 0 0 DNVNHPLWVERIAQLSP VARLAAERGIPVYAPDNVNHPLWVERIAQL VNHPLWVERIAQLSPDVIFSFYYRHLIYDE P D N S P D 1 1 2 1 0 1 1 0 1 1 2 0 0 0 2 1 0 1 0 2 0 0 17 1 1 2 1987.0276 P77398 P77398 60 76 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.022486 28.58 By MS/MS By MS/MS 1 1 2508300 0 0 0 0 922650 1585700 0 0 742 432 800 4381;4382 3228 3228 1 0 0 0 0 1313600 2260400 0 0 DNVVIYEGELESLR TEGVVKRHNPIRVLRDNVVIYEGELESLRR RDNVVIYEGELESLRRFKDDVNEVRNGMEC R D N L R R 0 1 1 1 0 0 3 1 0 1 2 0 0 0 0 1 0 0 1 2 0 0 14 0 3 0 1634.8152 P0A705;P0A705-3;P0A705-2 P0A705 833 846 infB Translation initiation factor IF-2 yes no 2 0.00015449 69.451 By matching By MS/MS By matching By MS/MS 1 1 1 1 22232000 3073900 3972400 0 0 7487300 7698000 0 0 743 90 801 4383;4384;4385;4386 3229;3230 3229 1 3073900 4066100 0 0 9031900 8527600 0 0 DNVVIYEGELESLRR TEGVVKRHNPIRVLRDNVVIYEGELESLRR DNVVIYEGELESLRRFKDDVNEVRNGMECG R D N R R F 0 2 1 1 0 0 3 1 0 1 2 0 0 0 0 1 0 0 1 2 0 0 15 1 3 0 1790.9163 P0A705;P0A705-3;P0A705-2 P0A705 833 847 infB Translation initiation factor IF-2 yes no 2;3 3.8437E-06 77.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 59316000 15894000 16386000 0 0 15949000 11087000 0 0 744 90 802 4387;4388;4389;4390;4391;4392;4393;4394 3231;3232;3233;3234;3235;3236;3237;3238;3239 3238 9 15894000 16773000 0 0 19239000 12282000 0 0 DPALSELYLVEGDSAGGSAK DLAGLPGKLADCQERDPALSELYLVEGDSA ELYLVEGDSAGGSAKQGRNRKNQAILPLKG R D P A K Q 3 0 0 2 0 0 2 3 0 0 3 1 0 0 1 3 0 0 1 1 0 0 20 0 2 4 1977.9531 P0AES6 P0AES6 414 433 gyrB DNA gyrase subunit B yes yes 2 7.7392E-13 115.8 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 57265000 11470000 16156000 0 11910000 3031800 4843300 4262700 5591300 745 239 803 4395;4396;4397;4398;4399;4400;4401 3240;3241 3241 2 176230000 246390000 0 90297000 3657300 5365300 32806000 32088000 DPETTAQWIER EKQDTAGSELLPQAKDPETTAQWIERCLAG PQAKDPETTAQWIERCLAGSEPIPESLKIQ K D P E R C 1 1 0 1 0 1 2 0 0 1 0 0 0 0 1 0 2 1 0 0 0 0 11 0 2 2 1344.631 P30177 P30177 270 280 ybiB Uncharacterized protein YbiB yes yes 2 8.7326E-06 126.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61111000 20731000 23592000 0 0 16788000 0 0 0 746 332 804 4402;4403;4404;4405 3242;3243;3244;3245 3244 4 20731000 24149000 0 0 20251000 0 0 0 DPFTLTEHDGK GHTDTVPFDDGRWTRDPFTLTEHDGKLYGL RWTRDPFTLTEHDGKLYGLGTADMKGFFAF R D P G K L 0 0 0 2 0 0 1 1 1 0 1 1 0 1 1 0 2 0 0 0 0 0 11 0 1 1 1258.583 P23908 P23908 94 104 argE Acetylornithine deacetylase yes yes 2;3 4.6116E-05 83.045 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 673430000 145280000 130800000 0 0 220540000 176800000 0 0 747 308 805 4406;4407;4408;4409;4410;4411;4412;4413;4414;4415;4416;4417 3246;3247;3248;3249;3250 3248 4 170920000 163230000 0 0 282980000 209240000 0 0 DPFTLTEHDGKLYGLGTADMK GHTDTVPFDDGRWTRDPFTLTEHDGKLYGL EHDGKLYGLGTADMKGFFAFILDALRDVDV R D P M K G 1 0 0 3 0 0 1 3 1 0 3 2 1 1 1 0 3 0 1 0 0 0 21 1 1 2 2308.1045 P23908 P23908 94 114 argE Acetylornithine deacetylase yes yes 3 1.0812E-72 156.92 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64956000 22191000 14993000 0 0 12745000 15027000 0 0 748 308 806 4418;4419;4420;4421 3251;3252;3253;3254 3251 4 22191000 15347000 0 0 15374000 16647000 0 0 DPGDSAEMMQAR EGYVNLLPVQHKRSRDPGDSAEMMQARRAF RSRDPGDSAEMMQARRAFLDAGHYQPLRDA R D P A R R 2 1 0 2 0 1 1 1 0 0 0 0 2 0 1 1 0 0 0 0 0 0 12 0 1 3 1306.5282 P36999 P36999 47 58 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 3.2046E-293 265.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 179960000 41403000 52126000 0 0 37661000 48766000 0 0 749 352 807;808 4422;4423;4424;4425;4426;4427;4428;4429 3255;3256;3257;3258;3259;3260;3261 3258 288;289 7 41403000 53356000 0 0 45430000 54022000 0 0 DPNPHVR FPRDVAELVDWFDARDPNPHVRPVPGYGEK LVDWFDARDPNPHVRPVPGYGEKIPVWLLG R D P V R P 0 1 1 1 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 7 0 0 2 833.4144 P0ADV5 P0ADV5 150 156 yhbW Uncharacterized protein YhbW yes yes 2 8.4703E-07 117.7 By MS/MS By MS/MS By MS/MS 1 1 2 70707000 28752000 29388000 0 0 0 12567000 0 0 750 226 809 4430;4431;4432;4433 3262;3263;3264;3265 3263 3 28752000 30082000 0 0 0 13922000 0 0 DPNPHVRPVPGYGEK FPRDVAELVDWFDARDPNPHVRPVPGYGEK DPNPHVRPVPGYGEKIPVWLLGSSLYSAQL R D P E K I 0 1 1 1 0 0 1 2 1 0 0 1 0 0 4 0 0 0 1 2 0 0 15 1 1 4 1660.8322 P0ADV5 P0ADV5 150 164 yhbW Uncharacterized protein YhbW yes yes 2;3 4.3135E-24 129.92 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 838150000 200490000 278670000 0 0 190880000 168100000 0 0 751 226 810 4434;4435;4436;4437;4438;4439;4440;4441 3266;3267;3268;3269;3270;3271;3272;3273 3268 8 200490000 285250000 0 0 230260000 186220000 0 0 DPSLSLYAIPDGDVK QLNITPPPDVNGLKKDPSLSLYAIPDGDVK DPSLSLYAIPDGDVKGRVVAILLNDEVRSA K D P V K G 1 0 0 3 0 0 0 1 0 1 2 1 0 0 2 2 0 0 1 1 0 0 15 0 0 3 1588.7985 P21179 P21179 585 599 katE Catalase HPII yes yes 2 7.9359E-92 184.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 171400000 45694000 41342000 0 0 35905000 48461000 0 0 752 293 811 4442;4443;4444;4445 3274;3275;3276;3277 3277 4 45694000 42318000 0 0 43312000 53684000 0 0 DQDAGFVSSDNMHIIEMP IEEVRARGGQLYVFADQDAGFVSSDNMHII AGFVSSDNMHIIEMPHVEEVIAPIFYTVPL A D Q M P H 1 0 1 3 0 1 1 1 1 2 0 0 2 1 1 2 0 0 0 1 0 0 18 0 1 1 2004.8557 P17169 P17169 549 566 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 2.2585E-15 89.629 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 64891000 4893900 5242300 0 0 19684000 35070000 0 0 753 288 812;813 4446;4447;4448;4449;4450;4451;4452;4453;4454;4455;4456;4457 3278;3279;3280;3281;3282 3281 241;242 5 29542000 31375000 0 0 28024000 49993000 0 0 DQFLGAMYTLP HGALLSGLREAGRIADQFLGAMYTLPRQAT GRIADQFLGAMYTLPRQATPGVPAQQSPSM A D Q L P R 1 0 0 1 0 1 0 1 0 0 2 0 1 1 1 0 1 0 1 0 0 0 11 0 0 1 1254.5955 LSD1-FL-His LSD1-FL-His 829 839 yes yes 2 9.0388E-10 131.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 169300000 17776000 27182000 0 0 83501000 40836000 0 0 754 24 814;815 4458;4459;4460;4461;4462;4463;4464 3283;3284;3285;3286;3287;3288 3287 38 6 107310000 162690000 0 0 118880000 58211000 0 0 DQGIDLR FDSRLINYLVEEFKKDQGIDLRNDPLAMQR YLVEEFKKDQGIDLRNDPLAMQRLKEAAEK K D Q L R N 0 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 815.41373 P0A6Y8 P0A6Y8 247 253 dnaK Chaperone protein DnaK yes yes 1;2 9.2721E-18 143.23 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1176600000 329310000 312560000 0 0 247320000 287380000 0 0 755 86 816 4465;4466;4467;4468;4469;4470;4471;4472 3289;3290;3291;3292;3293;3294;3295 3290 6 329310000 319930000 0 0 298340000 318350000 0 0 DQHQVIVLSKGP IGSGAAGLSLALRLADQHQVIVLSKGPVTE RLADQHQVIVLSKGPVTEGSTFYAQGGIAA A D Q G P V 0 0 0 1 0 2 0 1 1 1 1 1 0 0 1 1 0 0 0 2 0 0 12 1 0 0 1319.7197 P10902 P10902 29 40 nadB L-aspartate oxidase yes yes 2;3 1.8767E-19 142.08 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 59447000 4909300 7339600 0 0 27101000 20097000 0 0 756 274 817 4473;4474;4475;4476;4477;4478;4479;4480 3296;3297;3298 3298 3 29635000 43927000 0 0 38584000 28648000 0 0 DQLAAADIIVANK RLLLDEKSASNENFRDQLAAADIIVANKSD FRDQLAAADIIVANKSDRTTPESEQALQRW R D Q N K S 4 0 1 2 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 13 0 0 4 1340.73 P33030 P33030 141 153 yeiR Uncharacterized protein YeiR yes yes 2 1.2885E-19 130.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87933000 27602000 22761000 0 0 17429000 20141000 0 0 757 343 818 4481;4482;4483;4484 3299;3300;3301;3302 3301 4 27602000 23298000 0 0 21024000 22311000 0 0 DQLLENLQEGMEVK VSRRAVIESENSAERDQLLENLQEGMEVKG RDQLLENLQEGMEVKGIVKNLTDYGAFVDL R D Q V K G 0 0 1 1 0 2 3 1 0 0 3 1 1 0 0 0 0 0 0 1 0 0 14 0 3 0 1644.8029 P0AG67 P0AG67 183 196 rpsA 30S ribosomal protein S1 yes yes 2 2.0119E-17 119.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18024000 3560000 2620900 0 0 4616200 7226900 0 0 758 261 819 4485;4486;4487;4488 3303;3304;3305;3306 3306 4 3560000 2682800 0 0 5568500 8005800 0 0 DQMLGAVVFGHE AAVLMVESEAQLLSEDQMLGAVVFGHEQQQ LSEDQMLGAVVFGHEQQQVVIQNINELVKE E D Q H E Q 1 0 0 1 0 1 1 2 1 0 1 0 1 1 0 0 0 0 0 2 0 0 12 0 0 1 1301.6074 P05055 P05055 199 210 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 1.166E-11 111.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 1 45922000 6906400 7121500 6614500 6234900 5414700 7326700 5034100 1268800 759 48 820;821 4489;4490;4491;4492;4493;4494;4495;4496;4497;4498;4499;4500;4501;4502;4503 3307;3308;3309;3310;3311;3312;3313;3314;3315;3316;3317;3318;3319;3320 3313 70 14 106120000 108600000 56202000 47270000 83365000 111050000 38744000 7281200 DQNLISAHGKTIVVYGTR GCSRETVGRILKMLEDQNLISAHGKTIVVY LISAHGKTIVVYGTR_______________ E D Q T R - 1 1 1 1 0 1 0 2 1 2 1 1 0 0 0 1 2 0 1 2 0 0 18 1 0 1 1971.0538 P0ACJ8 P0ACJ8 193 210 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3;4 4.363E-33 127.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 4 2 3 3 4 3276800000 113430000 145750000 435540000 708860000 161510000 184200000 542540000 984960000 760 213 822 4504;4505;4506;4507;4508;4509;4510;4511;4512;4513;4514;4515;4516;4517;4518;4519;4520;4521;4522;4523;4524;4525;4526 3321;3322;3323;3324;3325;3326;3327;3328;3329;3330;3331;3332;3333;3334;3335;3336;3337;3338;3339;3340 3324 20 1736400000 2222700000 3700700000 5374300000 2486600000 2791800000 4175500000 5652500000 DQNVGIKVALRAME IRVASKLADLRGQNEDQNVGIKVALRAMEA EDQNVGIKVALRAMEAPLRQIVLNCGEEPS E D Q M E A 2 1 1 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 0 2 0 0 14 2 0 2 1542.8188 P0A6F5 P0A6F5 435 448 groL 60 kDa chaperonin yes yes 3 0.009363 31.389 By MS/MS By MS/MS 1 1 5436900 0 0 0 0 2247000 3189900 0 0 761 68 823 4527;4528 3341 3341 1 0 0 0 0 34594000 48348000 0 0 DRFTTIHIQE NFEDSILVSERVVQEDRFTTIHIQELACVS RVVQEDRFTTIHIQELACVSRDTKLGPEEI E D R Q E L 0 1 0 1 0 1 1 0 1 2 0 0 0 1 0 0 2 0 0 0 0 0 10 1 0 0 1258.6306 P0A8V2 P0A8V2 826 835 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.021195 39.022 By MS/MS By matching By matching 1 1 1 11538000 3496300 3979500 4062600 0 0 0 0 0 762 154 824 4529;4530;4531 3342 3342 1 53719000 60689000 34519000 0 0 0 0 0 DRFVVPSSHRE QAQEMYRYLAIANYEDRFVVPSSHRELARE ANYEDRFVVPSSHRELAREAFPEKNGCGFT E D R R E L 0 2 0 1 0 0 1 0 1 0 0 0 0 1 1 2 0 0 0 2 0 0 11 2 0 1 1327.6633 P11349 P11349 454 464 narH Respiratory nitrate reductase 1 beta chain yes yes 3 0.020782 28.283 By MS/MS 1 4926700 0 4926700 0 0 0 0 0 0 763 276 825 4532 3343 3343 1 0 75132000 0 0 0 0 0 0 DRGEDALIIYDDLSK YLAPYAGCAMGEYFRDRGEDALIIYDDLSK DRGEDALIIYDDLSKQAVAYRQISLLLRRP R D R S K Q 1 1 0 4 0 0 1 1 0 2 2 1 0 0 0 1 0 0 1 0 0 0 15 1 1 1 1721.8472 P0ABB0 P0ABB0 251 265 atpA ATP synthase subunit alpha yes yes 3 0.00010714 60.209 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20058000 4247100 6391500 0 0 9419800 0 0 0 764 193 826 4533;4534;4535;4536 3344;3345;3346;3347;3348;3349 3349 6 4247100 6542300 0 0 11363000 0 0 0 DRPEQDFLGIEVHSPGVGACLASAHEEGLSNLR EIGFGMGASLVAMAKDRPEQDFLGIEVHSP ACLASAHEEGLSNLRVMCHDAVEVLHKMIP K D R L R V 3 2 1 2 1 1 4 4 2 1 4 0 0 1 2 3 0 0 0 2 0 0 33 1 4 5 3559.7114 P0A8I5 P0A8I5 84 116 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 4 7.0863E-21 64.914 By MS/MS 1 9138300 0 0 0 0 9138300 0 0 0 765 144 827 4537 3350 3350 1 0 0 0 0 11024000 0 0 0 DRQILDWHFANLEFANATPLSTLSLK ELEANPPSDVYLSSRDRQILDWHFANLEFA LEFANATPLSTLSLKHWDQDDDFEFTGSHL R D R L K H 3 1 2 2 0 1 1 0 1 1 5 1 0 2 1 2 2 1 0 0 0 0 26 1 1 4 2999.5505 LSD1-FL-His LSD1-FL-His 527 552 yes yes 4 0.015952 17.369 By MS/MS By matching 1 1 91972000 0 0 0 0 50446000 41525000 0 0 766 24 828 4538;4539 3351 3351 1 0 0 0 0 60854000 46001000 0 0 DRRKQLDLPMMVE TIRHGSGIVCLCITEDRRKQLDLPMMVENN TEDRRKQLDLPMMVENNTSAYGTGFTVTIE E D R V E N 0 2 0 2 0 1 1 0 0 0 2 1 2 0 1 0 0 0 0 1 0 0 13 3 0 1 1629.8331 P0A7J0 P0A7J0 73 85 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 3 0.00053483 61.641 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 1 2 1 131680000 14744000 12739000 29285000 33483000 10042000 4703200 17457000 9226600 767 105 829;830 4540;4541;4542;4543;4544;4545;4546;4547;4548;4549;4550;4551 3352;3353;3354;3355;3356;3357;3358 3358 110;111 7 226540000 194270000 248830000 253850000 154600000 71284000 134360000 52950000 DRWVLAVAGTHGK PYMSGPQWLHDFVLRDRWVLAVAGTHGKTT LRDRWVLAVAGTHGKTTTAGMATWILEQCG R D R G K T 2 1 0 1 0 0 0 2 1 0 1 1 0 0 0 0 1 1 0 2 0 0 13 1 0 2 1408.7575 P37773 P37773 102 114 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 3 0.020986 28.146 By MS/MS By matching 1 1 10835000 0 6431900 0 0 0 4402700 0 0 768 360 831 4552;4553 3359 3359 1 0 6583700 0 0 0 4877300 0 0 DSALDLQHWE VWVPGTAAQGEAVVEDSALDLQHWEKEDGT EAVVEDSALDLQHWEKEDGTSVIPFFTSLE E D S W E K 1 0 0 2 0 1 1 0 1 0 2 0 0 0 0 1 0 1 0 0 0 0 10 0 0 1 1212.5411 P0AFZ1 P0AFZ1 49 58 sseB Protein SseB yes yes 2 0.012132 59.35 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3565000 755580 1063900 779590 965920 0 0 0 0 769 253 832 4554;4555;4556;4557 3360;3361 3360 0 11609000 16225000 6624100 7323200 0 0 0 0 DSHLGDFIE AKEPISMETPIGDDEDSHLGDFIEDTTLEL PIGDDEDSHLGDFIEDTTLELPLDSATTES E D S I E D 0 0 0 2 0 0 1 1 1 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 0 0 1031.456 P00579 P00579 516 524 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.00014509 107.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 104020000 12412000 7386400 14664000 13405000 4055800 3069300 25105000 23925000 770 27 833 4558;4559;4560;4561;4562;4563;4564;4565 3362;3363;3364;3365;3366 3366 5 190700000 112640000 124600000 101630000 62443000 46520000 193210000 137300000 DSLCLLQK THVPAGTGTEAASLRDSLCLLQKSYRFGSD TEAASLRDSLCLLQKSYRFGSDSGIGQLAA R D S Q K S 0 0 0 1 1 1 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 0 0 975.50592 P04993 P04993 350 357 recD RecBCD enzyme subunit RecD yes yes 2 0.0041151 53.163 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 771 46 834 4566;4567 3367;3368 3368 2 0 0 0 0 0 0 0 0 DSQEYVSK VYKPGNVVLTPTILRDSQEYVSKKHNLPHN LTPTILRDSQEYVSKKHNLPHNSLNFVFHG R D S S K K 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 2 0 0 1 1 0 0 8 0 1 0 954.42944 P0AB71 P0AB71 244 251 fbaA Fructose-bisphosphate aldolase class 2 yes yes 2 0.0019114 89.142 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14132000 3112100 5839800 0 0 2628400 2551700 0 0 772 190 835 4568;4569;4570;4571 3369;3370;3371;3372 3369 3 3112100 5977700 0 0 3170700 2826800 0 0 DSVIGLSK FVTIDGKATVAYIPKDSVIGLSKINRIVQF TVAYIPKDSVIGLSKINRIVQFFAQRPQVQ K D S S K I 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 8 0 0 0 817.45453 P0A6T5 P0A6T5 130 137 folE GTP cyclohydrolase 1 yes yes 2 0.0020615 87.181 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 82030000 23184000 18175000 0 0 19258000 21413000 0 0 773 81 836 4572;4573;4574;4575 3373;3374;3375;3376 3373 4 23184000 18604000 0 0 23231000 23721000 0 0 DSVSYGVVK FVFHGGSGSTAQEIKDSVSYGVVKMNIDTD TAQEIKDSVSYGVVKMNIDTDTQWATWEGV K D S V K M 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 2 0 0 1 3 0 0 9 0 0 0 952.48656 P0AB71 P0AB71 277 285 fbaA Fructose-bisphosphate aldolase class 2 yes yes 2 0.0030194 47.082 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 774 190 837 4576;4577 3377;3378 3377 2 0 0 0 0 0 0 0 0 DTAIMSYSTK QVQAIRQALDAAGFKDTAIMSYSTKFASSF AAGFKDTAIMSYSTKFASSFYGPFREAAGS K D T T K F 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 2 2 0 1 0 0 0 10 0 0 1 1115.5169 P0ACB2 P0ACB2 186 195 hemB Delta-aminolevulinic acid dehydratase yes yes 2 8.9443E-06 107.15 By MS/MS By MS/MS By MS/MS 1 1 1 26784000 7674800 0 0 0 8359500 10750000 0 0 775 207 838 4578;4579;4580 3379;3380 3379 2 7674800 0 0 0 10084000 11909000 0 0 DTAMLHR LVDWLQQRLGLLEQRDTAMLHRLLHDIEKN RLGLLEQRDTAMLHRLLHDIEKNITK____ R D T H R L 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 7 0 0 1 842.40687 P37005 P37005 211 217 lasT Uncharacterized tRNA/rRNA methyltransferase LasT yes yes 2 0.0030236 88.201 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 34939000 10454000 11710000 0 0 6787700 5986300 0 0 776 353 839 4581;4582;4583;4584 3381 3381 1 10454000 11987000 0 0 8188000 6631400 0 0 DTEELHPR RQRTWGVPMSLFVHKDTEELHPRTLELMEE MSLFVHKDTEELHPRTLELMEEVAKRVEVD K D T P R T 0 1 0 1 0 0 2 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 8 0 2 1 995.46722 P00956 P00956 481 488 ileS Isoleucine--tRNA ligase yes yes 2 0.0029265 72.138 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10153000 3443000 3776800 0 0 1725600 1207700 0 0 777 32 840 4585;4586;4587;4588 3382;3383;3384;3385 3385 4 3443000 3865900 0 0 2081500 1337800 0 0 DTHAHLTPE CLGNCDKGPNMMIDEDTHAHLTPEAIPELL NMMIDEDTHAHLTPEAIPELLERYK_____ E D T P E A 1 0 0 1 0 0 1 0 2 0 1 0 0 0 1 0 2 0 0 0 0 0 9 0 0 2 1019.4672 P0AFD1 P0AFD1 148 156 nuoE NADH-quinone oxidoreductase subunit E yes yes 2 0.008654 67.032 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 60852000 7185900 7401500 8864700 8064600 4514400 5258400 7555300 12007000 778 244 841 4589;4590;4591;4592;4593;4594;4595;4596 3386;3387;3388;3389 3386 4 110410000 112870000 75322000 61142000 69504000 79699000 58147000 68906000 DTHAHLTPEAIPE CLGNCDKGPNMMIDEDTHAHLTPEAIPELL DEDTHAHLTPEAIPELLERYK_________ E D T P E L 2 0 0 1 0 0 2 0 2 1 1 0 0 0 2 0 2 0 0 0 0 0 13 0 1 4 1429.6838 P0AFD1 P0AFD1 148 160 nuoE NADH-quinone oxidoreductase subunit E yes yes 3 0.0056081 42.031 By MS/MS 1 3849200 0 0 0 3849200 0 0 0 0 779 244 842 4597 3390 3390 0 0 0 0 29183000 0 0 0 0 DTHFETVHGLDAPGQHSSAYDLAVLSR FVEMMNNYAEKLHLKDTHFETVHGLDAPGQ PGQHSSAYDLAVLSRAIIHGEPEFYHMYSE K D T S R A 3 1 0 3 0 1 1 2 3 0 3 0 0 1 1 3 2 0 1 2 0 0 27 0 1 4 2922.3896 P33013 P33013 163 189 dacD D-alanyl-D-alanine carboxypeptidase DacD yes yes 4 8.1135E-07 43.696 By MS/MS By matching 1 1 18617000 12032000 0 0 0 0 6584600 0 0 780 341 843 4598;4599 3391 3391 0 12032000 0 0 0 0 7294300 0 0 DTKSNVYGKNHDTGVSP DLDIYTRLGGMVWRADTKSNVYGKNHDTGV KSNVYGKNHDTGVSPVFAGGVEYAITPEIA A D T S P V 0 0 2 2 0 0 0 2 1 0 0 2 0 0 1 2 2 0 1 2 0 0 17 2 0 0 1817.8544 P0A910 P0A910 126 142 ompA Outer membrane protein A yes yes 3 0.022177 16.88 By MS/MS By MS/MS By MS/MS 1 1 1 5767400 1040900 1338300 0 0 0 3388300 0 0 781 158 844 4600;4601;4602 3392 3392 1 6283100 8009500 0 0 0 4830000 0 0 DTLEDKAENKR WSPETDLLLASRYTRDTLEDKAENKRQLQI RYTRDTLEDKAENKRQLQIAMGLKVDDKVP R D T K R Q 1 1 1 2 0 0 2 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 11 2 2 1 1317.6525 P0A6U8 P0A6U8 268 278 glgA Glycogen synthase yes yes 3 7.743E-06 89.548 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 31136000 11331000 8277900 3244900 0 5813200 2469400 0 0 782 83 845 4603;4604;4605;4606;4607 3393;3394;3395;3396 3393 4 11331000 8473300 27572000 0 7012500 2735500 0 0 DTLFSAPIAR ______________________________ ______________________________ R D T A R L 2 1 0 1 0 0 0 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 10 0 0 3 1089.5819 P76290 P76290 5 14 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2 0.00030801 89.698 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33546000 10448000 9173300 0 0 7025800 6898900 0 0 783 421 846 4608;4609;4610;4611 3397;3398;3399;3400 3398 4 10448000 9389900 0 0 8475300 7642400 0 0 DTLHLEGK RAFLPGSLVDVRPVRDTLHLEGKELEFKVI VDVRPVRDTLHLEGKELEFKVIKLDQKRNN R D T G K E 0 0 0 1 0 0 1 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 1 0 911.47125 P0AG67 P0AG67 143 150 rpsA 30S ribosomal protein S1 yes yes 2 4.2669E-42 143.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19470000 0 19470000 0 0 0 0 0 0 784 261 847 4612;4613;4614;4615 3401;3402;3403;3404 3403 4 0 19930000 0 0 0 0 0 0 DTLIAGAGICDRHAVE AAVFDETDSIDSHVEDTLIAGAGICDRHAV TLIAGAGICDRHAVEFVASNARSCVQWLID E D T V E F 3 1 0 2 1 0 1 2 1 2 1 0 0 0 0 0 1 0 0 1 0 0 16 1 0 3 1696.8203 P10902 P10902 69 84 nadB L-aspartate oxidase yes yes 2 2.4611E-05 64.55 By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 14453000 3223800 3920600 0 2451100 1779400 0 0 3078100 785 274 848 4616;4617;4618;4619;4620 3405;3406 3406 2 49532000 59789000 0 18583000 27395000 0 0 17665000 DTLLAARSGSP LRGAYGTVIMDSRHPDTLLAARSGSPLVIG SRHPDTLLAARSGSPLVIGLGMGENFIASD P D T S P L 2 1 0 1 0 0 0 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 1 0 2 1086.5669 P17169 P17169 168 178 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 4.7935E-48 144.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 74340000 8093100 8834900 0 0 26547000 30865000 0 0 786 288 849 4621;4622;4623;4624;4625;4626;4627 3407;3408;3409;3410;3411 3409 3 40512000 46542000 0 0 37795000 43998000 0 0 DTRNEKLNSLEDVRKGSENYA PPGAQPTAPGSLKAPDTRNEKLNSLEDVRK LNSLEDVRKGSENYALTTNQGVRIADDQNS P D T Y A L 1 2 3 2 0 0 3 1 0 0 2 2 0 0 0 2 1 0 1 1 0 0 21 4 3 0 2437.1833 P21179 P21179 59 79 katE Catalase HPII yes yes 4 0.01247 16.93 By matching By MS/MS By MS/MS 1 1 1 9095500 0 591480 0 0 3154000 5350000 0 0 787 293 850 4628;4629;4630 3412 3412 1 0 3540000 0 0 4490300 7626400 0 0 DTTTIIDGVGEEAAIQGR TLEDLGQAKRVVINKDTTTIIDGVGEEAAI TIIDGVGEEAAIQGRVAQIRQQIEEATSDY K D T G R V 2 1 0 2 0 1 2 3 0 3 0 0 0 0 0 0 3 0 0 1 0 0 18 0 2 2 1844.9116 P0A6F5 P0A6F5 328 345 groL 60 kDa chaperonin yes yes 2;3 7.8898E-290 256.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 1966100000 398700000 394570000 0 0 593880000 578910000 0 0 788 68 851 4631;4632;4633;4634;4635;4636;4637;4638;4639 3413;3414;3415;3416;3417;3418;3419;3420;3421;3422;3423;3424 3413 12 398700000 403880000 0 0 716400000 641300000 0 0 DTWDTHGGK FFQGCLMRCLYCHNRDTWDTHGGKEVTVED LYCHNRDTWDTHGGKEVTVEDLMKEVVTYR R D T G K E 0 0 0 2 0 0 0 2 1 0 0 1 0 0 0 0 2 1 0 0 0 0 9 0 0 0 1015.4359 P0A9N4 P0A9N4 41 49 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 0.0061493 54.157 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 65263000 16924000 26188000 0 0 8565400 13585000 0 0 789 171 852 4640;4641;4642;4643 3425;3426 3426 2 16924000 26806000 0 0 10332000 15049000 0 0 DTWDTHGGKEVTVEDLMK FFQGCLMRCLYCHNRDTWDTHGGKEVTVED DTHGGKEVTVEDLMKEVVTYRHFMNASGGG R D T M K E 0 0 0 3 0 0 2 2 1 0 1 2 1 0 0 0 3 1 0 2 0 0 18 1 2 0 2059.9521 P0A9N4 P0A9N4 41 58 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3 3.6795E-08 60.764 By MS/MS 1 20703000 0 20703000 0 0 0 0 0 0 790 171 853 4644 3427 3427 1 0 21192000 0 0 0 0 0 0 DVAEILLEGLR ______________________________ IAQRDVAEILLEGLRRLEYRGYDSAGLAVV R D V L R R 1 1 0 1 0 0 2 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 11 0 2 1 1226.6871 P17169 P17169 12 22 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 2.858E-79 186.67 By MS/MS By MS/MS By MS/MS By MS/MS 7 9 8 9 19652000000 6974000000 2680400000 0 0 9648000 9987600000 0 0 791 288 854 4645;4646;4647;4648;4649;4650;4651;4652;4653;4654;4655;4656;4657;4658;4659;4660;4661;4662;4663;4664;4665;4666;4667;4668;4669;4670;4671;4672;4673;4674;4675;4676;4677 3428;3429;3430;3431;3432;3433;3434;3435;3436;3437;3438;3439;3440;3441;3442;3443;3444;3445;3446;3447;3448;3449;3450;3451;3452;3453;3454;3455;3456;3457;3458 3438 31 7026500000 2779700000 0 0 140150000 11148000000 0 0 DVAEILLEGLRR ______________________________ AQRDVAEILLEGLRRLEYRGYDSAGLAVVD R D V R R L 1 2 0 1 0 0 2 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 12 1 2 1 1382.7882 P17169 P17169 12 23 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 1.187E-138 215.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 1 2439100000 1116100000 529090000 0 0 367640000 426270000 0 0 792 288 855 4678;4679;4680;4681;4682;4683;4684;4685 3459;3460;3461;3462;3463;3464;3465 3461 7 1116100000 545680000 0 0 443490000 472210000 0 0 DVAELVDWFDAR ALRRHMSGDIDNFPRDVAELVDWFDARDPN FPRDVAELVDWFDARDPNPHVRPVPGYGEK R D V A R D 2 1 0 3 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 2 0 0 12 0 1 2 1434.6779 P0ADV5 P0ADV5 138 149 yhbW Uncharacterized protein YhbW yes yes 2 1.1959E-45 158.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1195100000 293610000 183780000 0 0 304970000 412790000 0 0 793 226 856 4686;4687;4688;4689 3466;3467;3468;3469 3469 4 293610000 188120000 0 0 367880000 457280000 0 0 DVAELVDWFDARDPNPHVR ALRRHMSGDIDNFPRDVAELVDWFDARDPN LVDWFDARDPNPHVRPVPGYGEKIPVWLLG R D V V R P 2 2 1 4 0 0 1 0 1 0 1 0 0 1 2 0 0 1 0 3 0 0 19 1 1 4 2250.0818 P0ADV5 P0ADV5 138 156 yhbW Uncharacterized protein YhbW yes yes 3 2.2809E-11 72.184 By matching By MS/MS 1 1 29475000 14266000 0 0 0 0 15209000 0 0 794 226 857 4690;4691 3470 3470 0 14266000 0 0 0 0 16848000 0 0 DVAGYAAGLELFDR FTNFVDFDSSWGHRRDVAGYAAGLELFDRR RDVAGYAAGLELFDRRLPELMSLLRDDDIL R D V D R R 3 1 0 2 0 0 1 2 0 0 2 0 0 1 0 0 0 0 1 1 0 0 14 0 1 3 1495.7307 P0A6K6 P0A6K6 314 327 deoB Phosphopentomutase yes yes 2 1.4253E-102 174.42 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 147460000 62599000 53016000 0 0 31848000 0 0 0 795 75 858 4692;4693;4694;4695 3471;3472;3473 3473 3 62599000 54267000 0 0 38419000 0 0 0 DVAGYAAGLELFDRR FTNFVDFDSSWGHRRDVAGYAAGLELFDRR DVAGYAAGLELFDRRLPELMSLLRDDDILI R D V R R L 3 2 0 2 0 0 1 2 0 0 2 0 0 1 0 0 0 0 1 1 0 0 15 1 1 3 1651.8318 P0A6K6 P0A6K6 314 328 deoB Phosphopentomutase yes yes 3 0.0017722 40.552 By MS/MS By matching By MS/MS 1 1 1 5466900 3063200 2403700 0 0 0 0 0 0 796 75 859 4696;4697;4698 3474;3475 3475 1 3063200 2460400 0 0 0 0 0 0 DVDAAYMNK NKRTTAENEFVMLKKDVDAAYMNKVELEAK FVMLKKDVDAAYMNKVELEAKVDALMDEIN K D V N K V 2 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 9 0 0 2 1025.4488 CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__P13647 CON__P13647 278 286 no no 2 6.3616E-06 84.916 By MS/MS By MS/MS 2 3 6407400 0 0 0 0 3329800 3077600 0 0 + 797 13;5 860;861 4699;4700;4701;4702;4703 3476;3477;3478;3479 3477 4 0 0 0 0 4016800 3409300 0 0 DVDGAYMTK NKRTNAENEFVTIKKDVDGAYMTKVDLQAK FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K D V T K V 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 0 0 9 0 0 1 998.4379 CON__P04264 CON__P04264 290 298 yes yes 2 0.000432 96.948 By MS/MS By MS/MS By MS/MS By MS/MS 4 5 5 5 647520000 108710000 99784000 0 0 203850000 235170000 0 0 + 798 9 862;863 4704;4705;4706;4707;4708;4709;4710;4711;4712;4713;4714;4715;4716;4717;4718;4719;4720;4721;4722 3480;3481;3482;3483;3484 3483 2 5 257860000 240380000 0 0 287860000 295090000 0 0 DVDNAYMIK NKRTAAENDFVTLKKDVDNAYMIKVELQSK FVTLKKDVDNAYMIKVELQSKVDLLNQEIE K D V I K V 1 0 1 2 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 0 9 0 0 1 1067.4957 CON__P35908v2;CON__P35908 CON__P35908v2 288 296 yes no 2 1.4091E-07 116.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 332770000 55966000 56492000 0 0 99758000 120550000 0 0 + 799 16 864;865 4723;4724;4725;4726;4727;4728;4729;4730 3485;3486;3487;3488;3489;3490 3488 27 6 55966000 57825000 0 0 120340000 133540000 0 0 DVFMGVDELQVGMR AYGQYDENLVQRVPKDVFMGVDELQVGMRF KDVFMGVDELQVGMRFLAETDQGPVPVEIT K D V M R F 0 1 0 2 0 1 1 2 0 0 1 0 2 1 0 0 0 0 0 3 0 0 14 0 1 0 1594.7483 P0A9K9 P0A9K9 82 95 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 2.7624E-190 228.98 By MS/MS By MS/MS By MS/MS By MS/MS 11 10 9 8 11678000000 3061300000 3363600000 0 0 2874400000 2378400000 0 0 800 169 866;867;868 4731;4732;4733;4734;4735;4736;4737;4738;4739;4740;4741;4742;4743;4744;4745;4746;4747;4748;4749;4750;4751;4752;4753;4754;4755;4756;4757;4758;4759;4760;4761;4762;4763;4764;4765;4766;4767;4768 3491;3492;3493;3494;3495;3496;3497;3498;3499;3500;3501;3502;3503;3504;3505;3506;3507;3508;3509;3510;3511;3512;3513;3514;3515;3516;3517;3518;3519 3514 160;161 28 3201900000 3482200000 0 0 3649300000 2634800000 0 0 DVHPTHYGR GPGGLTRERAGFEVRDVHPTHYGRVCPIET AGFEVRDVHPTHYGRVCPIETPEGPNIGLI R D V G R V 0 1 0 1 0 0 0 1 2 0 0 0 0 0 1 0 1 0 1 1 0 0 9 0 0 1 1080.5101 P0A8V2 P0A8V2 549 557 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.00081289 56.916 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24906000 7891500 7880900 0 0 5584900 3549100 0 0 801 154 869 4769;4770;4771;4772 3520;3521 3520 2 7891500 8067000 0 0 6737100 3931600 0 0 DVILVPSRFEP IGYHEAFSHRIMGGADVILVPSRFEPCGLT MGGADVILVPSRFEPCGLTQLYGLKYGTLP A D V E P C 0 1 0 1 0 0 1 0 0 1 1 0 0 1 2 1 0 0 0 2 0 0 11 1 1 1 1270.6921 P0A6U8 P0A6U8 368 378 glgA Glycogen synthase yes yes 2 0.00016854 78.934 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3534700 407640 394950 0 0 989340 1742700 0 0 802 83 870 4773;4774;4775;4776 3522;3523;3524 3522 2 2460700 2363800 0 0 1408500 2484300 0 0 DVKPLLMKSIHGDDDDHDHAEKSDE SKLPGAKQVTIAQLEDVKPLLMKSIHGDDD HGDDDDHDHAEKSDEDHHHGDFNMHLWLSP E D V D E D 1 0 0 7 0 0 2 1 3 1 2 3 1 0 1 2 0 0 0 1 0 0 25 3 1 2 2845.2825 P39172 P39172 109 133 znuA High-affinity zinc uptake system protein ZnuA yes yes 4 7.6798E-07 64.295 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 41420000 7123300 6596800 5177900 10598000 2069600 1488400 0 8366000 803 361 871 4777;4778;4779;4780;4781;4782;4783 3525;3526;3527 3525 3 109450000 100600000 43996000 80350000 31864000 22559000 0 48011000 DVLGMAQTGSGK SPIQAECIPHLLNGRDVLGMAQTGSGKTAA NGRDVLGMAQTGSGKTAAFSLPLLQNLDPE R D V G K T 1 0 0 1 0 1 0 3 0 0 1 1 1 0 0 1 1 0 0 1 0 0 12 0 0 1 1162.5652 P0A9P6 P0A9P6 45 56 deaD ATP-dependent RNA helicase DeaD yes yes 2 8.9709E-07 91.549 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 20619000 4599900 4407600 0 0 6572100 5039800 0 0 804 173 872 4784;4785;4786;4787 3528;3529;3530 3530 3 4599900 4511600 0 0 7927900 5583000 0 0 DVLKVQDQNQIPE PDEQRVADAWKAAMEDVLKVQDQNQIPELN MEDVLKVQDQNQIPELNVYQCGTYQMHSLQ E D V P E L 0 0 1 2 0 3 1 0 0 1 1 1 0 0 1 0 0 0 0 2 0 0 13 1 0 1 1524.7784 P45578 P45578 110 122 luxS S-ribosylhomocysteine lyase yes yes 2 1.3038E-14 118.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46890000 0 0 10147000 11155000 0 0 8492700 17095000 805 370 873 4788;4789;4790;4791 3531;3532;3533;3534 3533 4 0 0 86220000 84572000 0 0 65362000 98108000 DVNGLKKDP GIELTDDQLNITPPPDVNGLKKDPSLSLYA NITPPPDVNGLKKDPSLSLYAIPDGDVKGR P D V D P S 0 0 1 2 0 0 0 1 0 0 1 2 0 0 1 0 0 0 0 1 0 0 9 2 0 0 984.52401 P21179 P21179 578 586 katE Catalase HPII yes yes 2 0.011712 70.919 By MS/MS By MS/MS By MS/MS 1 1 1 8326400 2175300 2010600 0 0 0 4140400 0 0 806 293 874 4792;4793;4794 3535 3535 1 13131000 12034000 0 0 0 5902200 0 0 DVPAKMRIVAE AVGLPITLAQLDIKEDVPAKMRIVAEAACA DIKEDVPAKMRIVAEAACAEGETIHNMPGG E D V A E A 2 1 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 2 0 0 11 2 0 3 1227.6645 P0A9S5 P0A9S5 317 327 gldA Glycerol dehydrogenase yes yes 2 0.0060914 45.997 By MS/MS 1 0 0 0 0 0 0 0 0 0 807 176 875 4795 3536 3536 1 0 0 0 0 0 0 0 0 DVSIMPFK KRLIGRRFQDEEVQRDVSIMPFKIIAADNG QDEEVQRDVSIMPFKIIAADNGDAWVEVKG R D V F K I 0 0 0 1 0 0 0 0 0 1 0 1 1 1 1 1 0 0 0 1 0 0 8 0 0 1 935.47864 P0A6Y8 P0A6Y8 85 92 dnaK Chaperone protein DnaK yes yes 1;2 0.0020225 76.035 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 992870000 319280000 65890000 0 0 330340000 277370000 0 0 808 86 876;877 4796;4797;4798;4799;4800;4801;4802;4803;4804;4805;4806;4807 3537;3538;3539;3540;3541;3542;3543;3544;3545;3546 3542 90 10 319280000 67446000 0 0 398490000 307260000 0 0 DVSREGVQRDLLP DEIDKICKRGESSGPDVSREGVQRDLLPLV GPDVSREGVQRDLLPLVEGCTVSTKHGMVK P D V L P L 0 2 0 2 0 1 1 1 0 0 2 0 0 0 1 1 0 0 0 2 0 0 13 2 1 0 1482.7791 P0A6H5 P0A6H5 271 283 hslU ATP-dependent protease ATPase subunit HslU yes yes 3 0.01073 34.386 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8866500 1278700 1229900 0 0 2569700 3788200 0 0 809 71 878 4808;4809;4810;4811 3547 3547 1 7719000 7361000 0 0 3658400 5400000 0 0 DVTGHAIGAYIR AKAGYSKWHLQRMFKDVTGHAIGAYIRARR MFKDVTGHAIGAYIRARRLSKSAVALRLTA K D V I R A 2 1 0 1 0 0 0 2 1 2 0 0 0 0 0 0 1 0 1 1 0 0 12 0 0 2 1271.6622 P0ACI0 P0ACI0 44 55 rob Right origin-binding protein yes yes 2;3 2.2111E-13 140.75 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 1 1 221980000 57262000 65427000 0 0 40345000 56153000 1185300 1611300 810 211 879 4812;4813;4814;4815;4816;4817;4818;4819;4820;4821 3548;3549;3550;3551;3552;3553;3554;3555 3553 8 57262000 66971000 0 0 48668000 62205000 9122700 9247000 DVTTGDTLCDPDAPIILER KEVRAGDIAAAIGLKDVTTGDTLCDPDAPI GDTLCDPDAPIILERMEFPEPVISIAVEPK K D V E R M 1 1 0 4 1 0 1 1 0 2 2 0 0 0 2 0 3 0 0 1 0 0 19 0 1 3 2100.0045 P0A6M8 P0A6M8 390 408 fusA Elongation factor G yes yes 2 0.023191 29.689 By matching By matching By MS/MS By matching 1 1 1 1 8201900 1418100 1454600 0 0 2096100 3233100 0 0 811 76 880 4822;4823;4824;4825 3556 3556 1 1418100 1489000 0 0 2528500 3581600 0 0 DWLFTREGEQRFTAP AVLMKGGHLDDEQSPDWLFTREGEQRFTAP DWLFTREGEQRFTAPRIMTKNTHGTGCTLS P D W A P R 1 2 0 1 0 1 2 1 0 0 1 0 0 2 1 0 2 1 0 0 0 0 15 2 2 1 1851.8904 P76422 P76422 187 201 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 3 0.0010294 39.509 By MS/MS By MS/MS 1 1 7544400 0 0 0 0 2979700 4564700 0 0 812 425 881 4826;4827 3557;3558 3557 2 0 0 0 0 4242100 6507000 0 0 DWYVVDATGK ______________________________ ETVKRDWYVVDATGKTLGRLATELARRLRG R D W G K T 1 0 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 1 1 2 0 0 10 0 0 1 1152.5451 P0AA10 P0AA10 14 23 rplM 50S ribosomal protein L13 yes yes 2 2.945E-10 117.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 592620000 133330000 158250000 0 0 119170000 181870000 0 0 813 182 882 4828;4829;4830;4831 3559;3560;3561;3562 3562 4 133330000 161980000 0 0 143760000 201470000 0 0 DYLGEPVTE QISAEVLKKMKKTAEDYLGEPVTEAVITVP MKKTAEDYLGEPVTEAVITVPAYFNDAQRQ E D Y T E A 0 0 0 1 0 0 2 1 0 0 1 0 0 0 1 0 1 0 1 1 0 0 9 0 1 1 1021.4604 P0A6Y8 P0A6Y8 129 137 dnaK Chaperone protein DnaK yes yes 1;2 1.3492E-07 117.4 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 69871000 17810000 15316000 2042600 6825000 6936000 9101200 6718300 5121200 814 86 883 4832;4833;4834;4835;4836;4837;4838;4839 3563;3564;3565;3566;3567;3568;3569 3563 5 273650000 233580000 17356000 51744000 106790000 137940000 51706000 29390000 DYQELMNTK DALQQAKEDLARLLRDYQELMNTKLALDLE LARLLRDYQELMNTKLALDLEIATYRTLLE R D Y T K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 1 0 1140.5121 CON__P04264 CON__P04264 464 472 no no 2 2.1542E-61 180.34 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 695300000 122560000 88172000 0 0 239200000 245370000 0 0 + 815 9 884;885 4840;4841;4842;4843;4844;4845;4846;4847 3570;3571;3572;3573;3574;3575;3576;3577 3577 3 8 122560000 90253000 0 0 288540000 271810000 0 0 DYQELMNVK EALQQAKEDLARLLRDYQELMNVKLALDVE LARLLRDYQELMNVKLALDVEIATYRKLLE R D Y V K L 0 0 1 1 0 1 1 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 9 0 1 0 1138.5329 CON__P35908v2;CON__P35908 CON__P35908v2 462 470 no no 2 1.7085E-36 157.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 136660000 8141700 21543000 0 0 49839000 57139000 0 0 + 816 16 886;887 4848;4849;4850;4851 3578;3579;3580;3581 3581 28 4 8141700 22052000 0 0 60121000 63297000 0 0 DYRNKYEDE SRLDSELKNMQDMVEDYRNKYEDEINKRTN MQDMVEDYRNKYEDEINKRTNAENEFVTIK E D Y D E I 0 1 1 2 0 0 2 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 9 2 1 0 1230.5153 CON__P04264 CON__P04264 265 273 yes yes 2 0.004778 71.692 By MS/MS By MS/MS 1 1 9229700 4125100 5104700 0 0 0 0 0 0 + 817 9 888 4852;4853 3582;3583 3583 2 63380000 77847000 0 0 0 0 0 0 DYSPYFK KIRDWYQRQRPAEIKDYSPYFKTIEDLRNK RQRPAEIKDYSPYFKTIEDLRNKILTATVD K D Y F K T 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 0 0 0 7 0 0 1 918.41233 CON__P02533;CON__Q6IFX2;CON__Q3ZAW8;CON__Q9Z2K1;CON__P08779 CON__P02533 161 167 no no 2 0.0025404 79.454 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20776000 3483700 3772900 0 0 6777800 6741100 0 0 + 818 4;10 889 4854;4855;4856;4857 3584;3585;3586;3587;3588 3586 5 3483700 3862000 0 0 8176100 7467600 0 0 DYSYFNTLSTK LIRRCDYHLNLIHPKDYSYFNTLSTKLGWS IHPKDYSYFNTLSTKLGWSKKLF_______ K D Y T K L 0 0 1 1 0 0 0 0 0 0 1 1 0 1 0 2 2 0 2 0 0 0 11 0 0 0 1337.6139 P0A7B3 P0A7B3 274 284 nadK NAD kinase yes yes 2 5.0019E-24 143.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 226090000 58683000 53638000 0 0 55975000 57794000 0 0 819 99 890 4858;4859;4860;4861 3589;3590;3591;3592 3589 4 58683000 54904000 0 0 67523000 64023000 0 0 DYVSRMKE ASTHTDSSAQTVSLEDYVSRMKEGQEKIYY AQTVSLEDYVSRMKEGQEKIYYITADSYAA E D Y K E G 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 8 2 0 0 1026.4804 P0A6Z3 P0A6Z3 418 425 htpG Chaperone protein HtpG yes yes 2 0.0059432 61.999 By MS/MS 1 0 0 0 0 0 0 0 0 0 820 88 891 4862 3593 3593 1 0 0 0 0 0 0 0 0 EAAAQLFEK DPREVHFLYANSYEREAAAQLFEKWLETHP ANSYEREAAAQLFEKWLETHPMPQALFTTS R E A E K W 3 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 2 3 1005.5131 P0ACP1 P0ACP1 223 231 cra Catabolite repressor/activator yes yes 2 0.0026469 68.016 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 1 70250000 9798800 8304000 0 4037700 10009000 7937100 11350000 18813000 821 217 892 4863;4864;4865;4866;4867;4868;4869;4870;4871 3594;3595;3596 3594 3 11339000 8500000 0 30612000 12346000 8792600 87356000 107970000 EAADMLDAAR GALFVPNSLLNQFRREAADMLDAARLASYQ NQFRREAADMLDAARLASYQRGSRKPVADP R E A A R L 4 1 0 2 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1 4 1061.4812 P76104 P76104 495 504 ydcP Uncharacterized protease YdcP yes yes 2 0.00075536 73.985 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26396000 7109700 5623300 0 0 6022200 7641200 0 0 822 416 893 4872;4873;4874;4875 3597;3598;3599;3600 3597 4 7109700 5756000 0 0 7264700 8464700 0 0 EAAEILAK KVQLLGSGSILRHVREAAEILAKDYGVGSD SILRHVREAAEILAKDYGVGSDVYSVTSFT R E A A K D 3 0 0 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 0 2 3 843.47018 P0AFG8 P0AFG8 741 748 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0015251 72.138 By MS/MS 1 0 0 0 0 0 0 0 0 0 823 248 894 4876 3601 3601 1 0 0 0 0 0 0 0 0 EAAGSALKGDR SYSTKFASSFYGPFREAAGSALKGDRKSYQ GPFREAAGSALKGDRKSYQMNPMNRREAIR R E A D R K 3 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 11 1 1 3 1073.5465 P0ACB2 P0ACB2 206 216 hemB Delta-aminolevulinic acid dehydratase yes yes 2;3 0.0015413 60.518 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 22931000 7784200 6340000 0 0 5427100 3380100 0 0 824 207 895 4877;4878;4879;4880;4881;4882 3602;3603 3602 2 7784200 6489600 0 0 6546800 3744400 0 0 EAAIQGRVAQIRQQIEE VINKDTTTIIDGVGEEAAIQGRVAQIRQQI AIQGRVAQIRQQIEEATSDYDREKLQERVA E E A E E A 3 2 0 0 0 4 3 1 0 3 0 0 0 0 0 0 0 0 0 1 0 0 17 2 2 3 1938.0283 P0A6F5 P0A6F5 339 355 groL 60 kDa chaperonin yes yes 3 2.5729E-24 106.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 407320000 20780000 26128000 41142000 53512000 93757000 81309000 16703000 73993000 825 68 896 4883;4884;4885;4886;4887;4888;4889;4890 3604;3605;3606;3607;3608;3609 3605 6 319280000 398460000 349580000 405710000 1443500000 1232400000 128550000 424630000 EAAIQVSNVAIFNAATGK KPVPALNQPGGIVEKEAAIQVSNVAIFNAA IQVSNVAIFNAATGKADRVGFRFEDGKKVR K E A G K A 5 0 2 0 0 1 1 1 0 2 0 1 0 1 0 1 1 0 0 2 0 0 18 0 1 5 1802.9527 P60624 P60624 62 79 rplX 50S ribosomal protein L24 yes yes 2 0.00095468 62.042 By MS/MS By MS/MS 1 1 10524000 0 0 0 0 4973400 5550100 0 0 826 381 897 4891;4892 3610;3611 3610 2 0 0 0 0 5999400 6148300 0 0 EAALVHEALVAR ______________________________ LSKEAALVHEALVARGLETPLRPPVHEMDN K E A A R G 4 1 0 0 0 0 2 0 1 0 2 0 0 0 0 0 0 0 0 2 0 0 12 0 2 4 1277.7092 P0A6T5 P0A6T5 7 18 folE GTP cyclohydrolase 1 yes yes 2;3 8.938E-161 225.67 By MS/MS By MS/MS By MS/MS By MS/MS 4 2 3 3 284310000 83471000 68095000 0 0 58813000 73934000 0 0 827 81 898 4893;4894;4895;4896;4897;4898;4899;4900;4901;4902;4903;4904 3612;3613;3614;3615;3616;3617;3618 3613 4 92807000 69702000 0 0 70947000 81902000 0 0 EADAALGR HLFLVDLVDKNLTGKEADAALGRANITVNK DKNLTGKEADAALGRANITVNKNSVPNDPK K E A G R A 3 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1 3 801.39808 P0A825 P0A825 332 339 glyA Serine hydroxymethyltransferase yes yes 2 0.0052782 43.124 By MS/MS 1 0 0 0 0 0 0 0 0 0 828 136 899 4905 3619 3619 1 0 0 0 0 0 0 0 0 EAEAYTNEVQPR DDAIAARENEQQYIREAEAYTNEVQPRANG YIREAEAYTNEVQPRANGQAQRILEEARAY R E A P R A 2 1 1 0 0 1 3 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 12 0 3 3 1405.6474 P0ABC7 P0ABC7 267 278 hflK Modulator of FtsH protease HflK yes yes 2 2.5057E-14 125.48 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14418000 3403400 4055100 0 0 3154300 3805000 0 0 829 197 900 4906;4907;4908;4909 3620;3621;3622;3623 3623 4 3403400 4150800 0 0 3805100 4215100 0 0 EAEPQAKPPTVYR QDGAISAYDLLDLLREAEPQAKPPTVYRAL LREAEPQAKPPTVYRALDFLLEQGFVHKVE R E A Y R A 2 1 0 0 0 1 2 0 0 0 0 1 0 0 3 0 1 0 1 1 0 0 13 1 2 5 1484.7623 P0AC51 P0AC51 53 65 zur Zinc uptake regulation protein yes yes 2;3 6.9422E-08 84.365 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 77722000 19998000 19198000 0 0 22192000 16333000 0 0 830 204 901 4910;4911;4912;4913;4914;4915;4916;4917 3624;3625;3626;3627;3628;3629;3630;3631 3629 8 19998000 19652000 0 0 26771000 18093000 0 0 EAFSHSLDLAR SLLDLAPIPEGSSAREAFSHSLDLARLAEK SSAREAFSHSLDLARLAEKRGYHRYWLAEH R E A A R L 2 1 0 1 0 0 1 0 1 0 2 0 0 1 0 2 0 0 0 0 0 0 11 0 1 2 1244.6149 P0ADV5 P0ADV5 24 34 yhbW Uncharacterized protein YhbW yes yes 2;3 1.3691E-154 259.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 5 4 2601100000 783750000 638580000 0 0 548730000 630060000 0 0 831 226 902;903 4918;4919;4920;4921;4922;4923;4924;4925;4926;4927;4928;4929;4930 3632;3633;3634;3635;3636;3637;3638;3639;3640;3641 3637 21 8 783750000 653660000 0 0 707610000 698350000 0 0 EAGVYMR GVTVDKMTELRKAGREAGVYMRVVRNTLLR TELRKAGREAGVYMRVVRNTLLRRAVEGTP R E A M R V 1 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 7 0 1 1 824.38507 P0A7J3 P0A7J3 47 53 rplJ 50S ribosomal protein L10 yes yes 2 0.0025199 88.734 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33719000 7475700 9335300 0 0 6672700 10235000 0 0 832 106 904 4931;4932;4933;4934 3642;3643;3644;3645 3644 4 7475700 9555600 0 0 8049200 11338000 0 0 EAHPEIPTK GADYNWSLKLLERFKEAHPEIPTKSGLMVG LLERFKEAHPEIPTKSGLMVGLGETNEEII K E A T K S 1 0 0 0 0 0 2 0 1 1 0 1 0 0 2 0 1 0 0 0 0 0 9 0 2 3 1020.524 P60716 P60716 223 231 lipA Lipoyl synthase yes yes 2 0.00055718 95.531 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 12412000 3390700 3389200 0 0 2887500 2745100 0 0 833 382 905 4935;4936;4937;4938 3646;3647;3648 3647 3 3390700 3469200 0 0 3483100 3041000 0 0 EAIEHEMHHYEDPR QQPQTEAFELSAAEREAIEHEMHHYEDPRA REAIEHEMHHYEDPRAASIEALKIVQKQRG R E A P R A 1 1 0 1 0 0 4 0 3 1 0 0 1 0 1 0 0 0 1 0 0 0 14 0 4 2 1791.7635 P0AFD1 P0AFD1 20 33 nuoE NADH-quinone oxidoreductase subunit E yes yes 3 1.1537E-11 98.368 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 69418000 17374000 20709000 0 0 18307000 13028000 0 0 834 244 906 4939;4940;4941;4942 3649;3650;3651;3652 3650 4 17374000 21198000 0 0 22084000 14432000 0 0 EAILHGADAVYIGGPGFGAR RLELLSPARDAAIAREAILHGADAVYIGGP GADAVYIGGPGFGARHNASNSLKDIAELVP R E A A R H 4 1 0 1 0 0 1 5 1 2 1 0 0 1 1 0 0 0 1 1 0 0 20 0 1 5 1970.001 P76104 P76104 22 41 ydcP Uncharacterized protease YdcP yes yes 3 7.157E-05 48.288 By MS/MS 1 9099400 0 0 0 0 9099400 0 0 0 835 416 907 4943 3653 3653 1 0 0 0 0 10977000 0 0 0 EAITAIR FGVNIEGLKRRGFSREAITAIRNAYKLIYR LKRRGFSREAITAIRNAYKLIYRSGKTLDE R E A I R N 2 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 7 0 1 2 772.4443 P0A722 P0A722 210 216 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2 4.359E-11 128.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 138020000 12765000 11703000 15009000 14626000 10387000 11416000 21851000 40269000 836 92 908 4944;4945;4946;4947;4948;4949;4950;4951;4952 3654;3655;3656;3657 3657 4 12765000 11979000 127520000 110890000 12530000 13016000 168170000 231100000 EALGVLHFK PGVDVPVYGVPINTREALGVLHFKGFIIDD VPINTREALGVLHFKGFIIDDSVLYSGASL R E A F K G 1 0 0 0 0 0 1 1 1 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1 1 1012.5706 P23830 P23830 132 140 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.0020979 75.109 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46920000 10636000 13115000 0 0 10397000 12772000 0 0 837 304 909 4953;4954;4955;4956 3658;3659;3660;3661 3658 4 10636000 13424000 0 0 12542000 14149000 0 0 EALNEQASK GIAVNALGHAHPELREALNEQASKFWHTGN AHPELREALNEQASKFWHTGNGYTNEPVLR R E A S K F 2 0 1 0 0 1 2 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 2 2 988.48254 P77581 P77581 62 70 astC Succinylornithine transaminase yes yes 2 0.0011642 88.948 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87246000 31041000 35182000 0 0 12241000 8781300 0 0 838 437 910 4957;4958;4959;4960 3662;3663;3664;3665 3662 4 31041000 36013000 0 0 14766000 9727700 0 0 EALRDLLALQEK NANFTGRAITIDFVREALRDLLALQEKLVT FVREALRDLLALQEKLVTIDNIQKTVAEYY R E A E K L 2 1 0 1 0 1 2 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 12 1 2 2 1397.7878 P03004 P03004 361 372 dnaA Chromosomal replication initiator protein DnaA yes yes 3 0.0043649 42.809 By MS/MS By MS/MS By matching By matching 1 1 1 1 18765000 5984400 4845600 0 0 3396800 4538000 0 0 839 40 911 4961;4962;4963;4964 3666 3666 1 5984400 4960000 0 0 4097600 5027100 0 0 EAPDADDLMLAE DIIQMINDMGIQVMEEAPDADDLMLAENTA VMEEAPDADDLMLAENTADEDAAEAAAQVL E E A A E N 3 0 0 3 0 0 2 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 12 0 1 4 1288.5493 P00579 P00579 58 69 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0020844 46.891 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13181000 3700100 4890500 1034200 1520700 0 0 965330 1070600 840 27 912 4965;4966;4967;4968;4969;4970 3667 3667 0 56851000 74581000 8787200 11529000 0 0 7429400 6143900 EAQSLLEQIR SLVLALLWTGGHPSKEAQSLLEQIRHIDGD GHPSKEAQSLLEQIRHIDGDFEFETYYSLS K E A I R H 1 1 0 0 0 2 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 10 0 2 1 1185.6354 P35340 P35340 104 113 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 3.7011E-38 187.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1478200000 304530000 436330000 0 0 321350000 415980000 0 0 841 348 913 4971;4972;4973;4974 3668;3669;3670;3671 3669 4 304530000 446630000 0 0 387650000 460820000 0 0 EARQLVSHKA LDNVVYRMGFGATRAEARQLVSHKAIMVNG GATRAEARQLVSHKAIMVNGRVVNIASYQV A E A K A I 2 1 0 0 0 1 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 10 2 1 1 1137.6255 P0A7V8 P0A7V8 113 122 rpsD 30S ribosomal protein S4 yes yes 3 0.0022993 61.765 By MS/MS By MS/MS By MS/MS 1 1 1 92818000 31556000 32704000 0 0 0 28558000 0 0 842 130 914 4975;4976;4977 3672;3673;3674 3672 0 190490000 195730000 0 0 0 40710000 0 0 EASEVKPPR VNLKEKIKELHQQYKEASEVKPPRDITAEF LHQQYKEASEVKPPRDITAEFLVKSKHRDL K E A P R D 1 1 0 0 0 0 2 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 9 1 2 3 1011.5349 LSD1-FL-His LSD1-FL-His 466 474 yes yes 2 5.4441E-109 205.7 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 11156000000 4279700000 3104700000 0 0 1950300000 1821000000 0 0 843 24 915 4978;4979;4980;4981;4982;4983;4984;4985 3675;3676;3677;3678;3679;3680;3681;3682;3683;3684;3685 3683 11 4304000000 3193100000 0 0 2389800000 2017300000 0 0 EASEVKPPRDITAEFLVK VNLKEKIKELHQQYKEASEVKPPRDITAEF EVKPPRDITAEFLVKSKHRDLTALCKEYDE K E A V K S 2 1 0 1 0 0 3 0 0 1 1 2 0 1 2 1 1 0 0 2 0 0 18 2 3 4 2028.0892 LSD1-FL-His LSD1-FL-His 466 483 yes yes 3;4 7.3154E-124 191.93 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1281300000 489540000 373140000 0 0 215480000 203110000 0 0 844 24 916 4986;4987;4988;4989;4990;4991;4992;4993 3686;3687;3688;3689;3690;3691;3692;3693;3694 3689 9 489540000 381940000 0 0 259930000 225000000 0 0 EATEQSQPAAAPEAPAAEQGE VLEVDRQGRIRLSIKEATEQSQPAAAPEAP QPAAAPEAPAAEQGE_______________ K E A G E - 7 0 0 0 0 3 5 1 0 0 0 0 0 0 3 1 1 0 0 0 0 0 21 0 4 10 2080.9185 P05055 P05055 691 711 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0002181 44.132 By matching By matching By MS/MS 1 1 1 17151000 5012900 5006400 0 0 7131500 0 0 0 845 48 917 4994;4995;4996 3695 3695 1 5012900 5124500 0 0 8602700 0 0 0 EAVRGVTKE ARGADLRYNMELTLEEAVRGVTKEIRIPTL MELTLEEAVRGVTKEIRIPTLEECDVCHGS E E A K E I 1 1 0 0 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 2 0 0 9 2 1 1 987.53491 P08622 P08622 127 135 dnaJ Chaperone protein DnaJ yes yes 2 0.0041646 79.906 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 19513000 6869300 4742100 0 0 4617300 3284500 0 0 846 61 918 4997;4998;4999;5000;5001;5002;5003;5004 3696 3696 0 69831000 50769000 0 0 47750000 35021000 0 0 EAYEVLTDSQK NQGDKEAEAKFKEIKEAYEVLTDSQKRAAY KEIKEAYEVLTDSQKRAAYDQYGHAAFEQG K E A Q K R 1 0 0 1 0 1 2 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 11 0 2 1 1281.6089 P08622 P08622 52 62 dnaJ Chaperone protein DnaJ yes yes 2 1.8876E-186 234.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 207980000 58248000 0 0 0 64072000 85660000 0 0 847 61 919 5005;5006;5007;5008 3697;3698;3699;3700 3698 4 58248000 0 0 0 77290000 94892000 0 0 EAYEVLTDSQKR NQGDKEAEAKFKEIKEAYEVLTDSQKRAAY EIKEAYEVLTDSQKRAAYDQYGHAAFEQGG K E A K R A 1 1 0 1 0 1 2 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 12 1 2 1 1437.71 P08622 P08622 52 63 dnaJ Chaperone protein DnaJ yes yes 2;3 2.513E-36 152.97 By MS/MS By MS/MS By matching 2 2 1 62379000 27783000 27643000 0 0 0 0 6952900 0 848 61 920 5009;5010;5011;5012;5013 3701;3702;3703 3703 3 27783000 28296000 0 0 0 0 53511000 0 ECTLETLEEMLEK LKILNNIRTLRAQARECTLETLEEMLEKLE ARECTLETLEEMLEKLEVVVNERREEESAA R E C E K L 0 0 0 0 1 0 5 0 0 0 3 1 1 0 0 0 2 0 0 0 0 0 13 0 5 0 1623.7372 P0ACF8 P0ACF8 20 32 hns DNA-binding protein H-NS yes yes 2 3.826E-10 110.39 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 140190000 60765000 29455000 0 0 23143000 26829000 0 0 849 210 921 5014;5015;5016;5017 3704;3705;3706 3706 3 60765000 30150000 0 0 27917000 29720000 0 0 EDDPSAHLASPK AVRRLFQYLYREKFREDDPSAHLASPKLPQ KFREDDPSAHLASPKLPQRLPKDLSEAQVE R E D P K L 2 0 0 2 0 0 1 0 1 0 1 1 0 0 2 2 0 0 0 0 0 0 12 0 1 4 1265.5888 P0A8P8 P0A8P8 93 104 xerD Tyrosine recombinase XerD yes yes 2;3 1.3457E-06 87.298 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 47081000 11781000 13522000 0 0 12259000 9519600 0 0 850 151 922 5018;5019;5020;5021;5022;5023;5024;5025 3707;3708;3709;3710;3711;3712;3713 3710 7 11781000 13841000 0 0 14788000 10546000 0 0 EDEGLADR GDPTGALTRNFDNMREDEGLADRATFVVDP RNFDNMREDEGLADRATFVVDPQGIIQAIE R E D D R A 1 1 0 2 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 2 1 903.39339 P0AE08 P0AE08 113 120 ahpC Alkyl hydroperoxide reductase subunit C yes yes 2 0.0064933 58.917 By MS/MS 1 1760000 0 0 0 0 1760000 0 0 0 851 233 923 5026 3714 3714 1 0 0 0 0 2123000 0 0 0 EDFIIHR DQLRGIIHADEKLAREDFIIHRRDGLFAYN HADEKLAREDFIIHRRDGLFAYNLAVVVDD R E D H R R 0 1 0 1 0 0 1 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 7 0 1 0 928.47667 P27305 P27305 169 175 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 2 1.5922E-11 132.94 By MS/MS By MS/MS By MS/MS 1 1 1 35735000 14132000 11548000 0 0 0 10055000 0 0 852 322 924 5027;5028;5029 3715;3716;3717 3715 1 14132000 11821000 0 0 0 11139000 0 0 EDFSDKHHALFLGRGDQYP IEQMLSQDKRIEALAEDFSDKHHALFLGRG DKHHALFLGRGDQYPIALEGALKLKEISYI A E D Y P I 1 1 0 3 0 1 1 2 2 0 2 1 0 2 1 1 0 0 1 0 0 0 19 2 1 1 2231.0396 P17169 P17169 460 478 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 7.5983E-16 84.375 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 258910000 2118100 1743900 0 0 130880000 124170000 0 0 853 288 925 5030;5031;5032;5033;5034;5035;5036;5037 3718;3719;3720;3721 3721 3 12786000 10437000 0 0 186330000 177000000 0 0 EDGIYVTMEGK FNLMLETKVTAVEAKEDGIYVTMEGKKAPA VEAKEDGIYVTMEGKKAPAEPQRYDAVLVA K E D G K K 0 0 0 1 0 0 2 2 0 1 0 1 1 0 0 0 1 0 1 1 0 0 11 0 2 0 1240.5646 P0A9P0 P0A9P0 245 255 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.00017141 81.525 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40501000 16665000 8339000 0 0 8245600 7251400 0 0 854 172 926 5038;5039;5040;5041 3722;3723;3724;3725 3724 4 16665000 8535800 0 0 9946700 8032900 0 0 EDGLVAR GISHHTDETGSDAWREDGLVARMSRICKQT ETGSDAWREDGLVARMSRICKQTVPEMIVM R E D A R M 1 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 1 1 758.39227 P0ACB2 P0ACB2 95 101 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.0036193 57.335 By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 9462600 653070 4206000 0 0 3160000 1443500 0 0 855 207 927 5042;5043;5044;5045;5046;5047;5048 3726;3727;3728 3728 3 3942300 7353100 0 0 3811900 2057700 0 0 EDHYEVYGLDIGSDAISR VNGFIGNHLTERLLREDHYEVYGLDIGSDA YEVYGLDIGSDAISRFLNHPHFHFVEGDIS R E D S R F 1 1 0 3 0 0 2 2 1 2 1 0 0 0 0 2 0 0 2 1 0 0 18 0 2 1 2037.928 P77398 P77398 338 355 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.2466E-261 303.02 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 2692100000 661570000 647470000 0 0 594380000 788720000 0 0 856 432 928 5049;5050;5051;5052;5053;5054;5055;5056;5057;5058 3729;3730;3731;3732;3733;3734;3735;3736 3734 8 676540000 662750000 0 0 741400000 873720000 0 0 EDIEYVESIK KGQCNLRFDDTNPVKEDIEYVESIKNDVEW TNPVKEDIEYVESIKNDVEWLGFHWSGNVR K E D I K N 0 0 0 1 0 0 3 0 0 2 0 1 0 0 0 1 0 0 1 1 0 0 10 0 3 0 1223.5921 P00962 P00962 74 83 glnS Glutamine--tRNA ligase yes yes 2 0.0033725 66.073 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 857 34 929 5059;5060;5061;5062 3737;3738;3739 3739 11 0 0 0 0 0 0 0 0 0 EDLAPTATHVGSE RLSDLITGFVDPNAEEDLAPTATHVGSELS AEEDLAPTATHVGSELSQEDLDDDEDEDEE E E D S E L 2 0 0 1 0 0 2 1 1 0 1 0 0 0 1 1 2 0 0 1 0 0 13 0 1 3 1325.6099 P00579 P00579 172 184 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.01799 47.198 By MS/MS By MS/MS 1 1 3111500 1656900 1454500 0 0 0 0 0 0 858 27 930 5063;5064 3740 3740 1 25459000 22182000 0 0 0 0 0 0 EDLAQTR HAYTHATLVSPVHLKEDLAQTRKRGYSFDD LVSPVHLKEDLAQTRKRGYSFDDEEHALGL K E D T R K 1 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 1 1 831.40865 P16528 P16528 199 205 iclR Acetate operon repressor yes yes 2 4.9113E-07 121.29 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 146660000 49520000 36637000 0 0 40645000 19026000 0 826770 859 285 931 5065;5066;5067;5068;5069 3741;3742;3743;3744;3745 3742 5 49520000 37502000 0 0 49030000 21077000 0 4744700 EDNSLPVR LLAEIAELSDKVTFKEDNSLPVRKPSFLIT SDKVTFKEDNSLPVRKPSFLITNPGSNQGP K E D V R K 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 8 0 1 1 928.46141 P35340 P35340 54 61 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.0027943 75.189 By matching By MS/MS By matching By MS/MS 1 1 1 1 533720000 130460000 109920000 0 0 157420000 135910000 0 0 860 348 932 5070;5071;5072;5073 3746;3747;3748 3747 3 130460000 112520000 0 0 189900000 150560000 0 0 EDYVHRIGRTGRAA EELPHVVNYELPNVPEDYVHRIGRTGRAAA PEDYVHRIGRTGRAAATGEALSLVCVDEHK P E D A A A 2 3 0 1 0 0 1 2 1 1 0 0 0 0 0 0 1 0 1 1 0 0 14 3 1 1 1599.823 P25888 P25888 327 340 rhlE ATP-dependent RNA helicase RhlE yes yes 4 9.6466E-06 66.533 By MS/MS By MS/MS By MS/MS 1 1 1 23136000 2497800 3196200 0 0 0 17442000 0 0 861 318 933 5074;5075;5076 3749;3750;3751 3751 3 15078000 19129000 0 0 0 24863000 0 0 EEAEALYHSK AEVKAQYEEIAQRSKEEAEALYHSKYEELQ AQRSKEEAEALYHSKYEELQVTVGRHGDSL K E E S K Y 2 0 0 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 10 0 3 2 1175.5459 CON__P35908v2;CON__P35908 CON__P35908v2 365 374 yes no 2 0.0097356 49.418 By MS/MS By matching 1 1 4145400 0 0 0 0 2862600 1282700 0 0 + 862 16 934 5077;5078 3752 3752 1 0 0 0 0 3453200 1421000 0 0 EEENESEP EKEKKLPPPPPQAPPEEENESEPEEPSGVE PPPQAPPEEENESEPEEPSGVEGAAFQSRL P E E E P E 0 0 1 0 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 8 0 5 0 961.35125 LSD1-FL-His LSD1-FL-His 163 170 yes yes 1 1.1978E-40 166.34 By MS/MS 1 36725000 0 0 0 0 0 36725000 0 0 863 24 935 5079 3753 3753 0 0 0 0 0 0 52351000 0 0 EEENESEPEEP EKEKKLPPPPPQAPPEEENESEPEEPSGVE QAPPEEENESEPEEPSGVEGAAFQSRLPHD P E E E P S 0 0 1 0 0 0 7 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 11 0 7 1 1316.4892 LSD1-FL-His LSD1-FL-His 163 173 yes yes 2 6.2698E-07 100.02 By MS/MS By MS/MS By MS/MS 1 1 1 34748000 9081300 10501000 0 0 0 15166000 0 0 864 24 936 5080;5081;5082 3754;3755;3756 3755 3 54819000 62849000 0 0 0 21619000 0 0 EEESAAAAEVEER EEMLEKLEVVVNERREEESAAAAEVEERTR RREEESAAAAEVEERTRKLQQYREMLIADG R E E E R T 4 1 0 0 0 0 6 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 13 0 6 4 1418.6161 P0ACF8 P0ACF8 42 54 hns DNA-binding protein H-NS yes yes 2 6.6259E-119 199.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 149450000 42730000 37994000 0 0 36355000 32366000 0 0 865 210 937 5083;5084;5085;5086 3757;3758;3759;3760 3758 4 42730000 38891000 0 0 43855000 35854000 0 0 EEKDGETVISWEK KYSDHIALPVEIEKREEKDGETVISWEKIN KREEKDGETVISWEKINKAQALWTRNKSEI R E E E K I 0 0 0 1 0 0 4 1 0 1 0 2 0 0 0 1 1 1 0 1 0 0 13 1 4 0 1548.7308 P0A6Z3 P0A6Z3 214 226 htpG Chaperone protein HtpG yes yes 3 6.0338E-06 76.262 By MS/MS By MS/MS By MS/MS 1 1 1 29725000 13109000 11177000 0 0 0 5438000 0 0 866 88 938 5087;5088;5089 3761;3762 3762 2 13109000 11441000 0 0 0 6024100 0 0 EELAERMLMP ISRQMLQEMGREPTPEELAERMLMPEDKIR REPTPEELAERMLMPEDKIRKVLKIAKEPI P E E M P E 1 1 0 0 0 0 3 0 0 0 2 0 2 0 1 0 0 0 0 0 0 0 10 1 3 1 1217.5784 P00579 P00579 481 490 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0021749 81.296 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8617600 559880 642680 0 0 2009900 5405200 0 0 867 27 939 5090;5091;5092;5093 3763;3764 3764 2 3379800 3846400 0 0 2861400 7705000 0 0 EELERENNHLK NNSLSQEVQNAQHQREELERENNHLKEQQN QHQREELERENNHLKEQQNGWQERLQALLG R E E L K E 0 1 2 0 0 0 4 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 11 1 4 0 1409.6899 P0AF36 P0AF36 51 61 zapB Cell division protein ZapB yes yes 3 0.0010875 50.452 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17064000 6943700 6870000 0 0 1406600 1843200 0 0 868 242 940 5094;5095;5096;5097 3765;3766 3766 2 6943700 7032200 0 0 1696800 2041900 0 0 EELLAVGR LKKAQESYWAGNSTREELLAVGRELRARHW WAGNSTREELLAVGRELRARHWDQQKQAGI R E E G R E 1 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 2 1 885.49198 P25665 P25665 34 41 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase yes yes 2 0.0028875 73.039 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 3 1 33573000 2142200 3781600 0 8525200 3805300 5447800 0 9871000 869 317 941 5098;5099;5100;5101;5102;5103;5104;5105;5106 3767;3768 3767 2 2142200 57669000 0 64634000 28688000 36218000 0 56648000 EFADNLDSDFK GIVKPWNSTWFANTKEFADNLDSDFKVRQY ANTKEFADNLDSDFKVRQYLTKELAKASVS K E F F K V 1 0 1 3 0 0 1 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 11 0 1 1 1299.5619 P0A7V3 P0A7V3 28 38 rpsC 30S ribosomal protein S3 yes yes 2 1.2122E-23 141.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 195080000 56565000 38405000 0 0 50159000 49946000 0 0 870 129 942 5107;5108;5109;5110 3769;3770;3771;3772 3769 4 56565000 39311000 0 0 60507000 55329000 0 0 EFAHLQTLLPKPPAHHPHYAFR RALANDSAWHRLSEKEFAHLQTLLPKPPAH LLPKPPAHHPHYAFRFIDLFAGIGGIRRGF K E F F R F 3 1 0 0 0 1 1 0 4 0 3 1 0 2 4 0 1 0 1 0 0 0 22 1 1 7 2606.3659 P0AED9 P0AED9 67 88 dcm DNA-cytosine methyltransferase yes yes 5 0.020892 11.622 By matching By matching By MS/MS By MS/MS 1 1 1 1 45270000 5429400 8470100 0 0 13841000 17529000 0 0 871 235 943 5111;5112;5113;5114 3773 3773 1 5429400 8670100 0 0 16696000 19419000 0 0 EFAQLAFK PFNRALGMELERYEKEFAQLAFKNQPMMVG ELERYEKEFAQLAFKNQPMMVGNWAQSILH K E F F K N 2 0 0 0 0 1 1 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 8 0 1 2 952.50182 P0ADP2 P0ADP2 38 45 yigI Uncharacterized protein YigI yes yes 2 0.0027891 75.311 By matching By matching By MS/MS By MS/MS 1 1 1 1 14279000 2457800 3503600 0 0 4169800 4147400 0 0 872 224 944 5115;5116;5117;5118 3774;3775 3775 2 2457800 3586300 0 0 5030100 4594400 0 0 EFDAVVIGAGGAGMR ______________________________ EFDAVVIGAGGAGMRAALQISQSGQTCALL R E F M R A 3 1 0 1 0 0 1 4 0 1 0 0 1 1 0 0 0 0 0 2 0 0 15 0 1 3 1448.7082 P0AC41 P0AC41 7 21 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 8.196E-103 172.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 873 203 945 5119;5120;5121;5122 3776;3777;3778;3779 3776 4 0 0 0 0 0 0 0 0 EFDENGRP ______________________________ KNDVISPEFDENGRPLRRIRSFVRRQGRLT P E F R P L 0 1 1 1 0 0 2 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 8 1 2 0 962.40937 P0A8I5 P0A8I5 9 16 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 0.0068488 72.234 By MS/MS By MS/MS By MS/MS 1 1 1 4669600 988110 1245700 0 0 0 2435800 0 0 874 144 946 5123;5124;5125 3780 3780 1 5964800 7455600 0 0 0 3472200 0 0 EFGVNLAK DAYVHATPLIRRLAREFGVNLAKVKGTGRK LIRRLAREFGVNLAKVKGTGRKGRILREDV R E F A K V 1 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 1 1 876.47052 P06959 P06959 339 346 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.020092 46.37 By matching By matching By MS/MS By matching 1 1 1 1 15776000 2896800 2884700 0 0 4293000 5701400 0 0 875 53 947 5126;5127;5128;5129 3781 3781 1 2896800 2952800 0 0 5178700 6315900 0 0 EFKKDQGIDLRNDPLAMQRLKE GGEDFDSRLINYLVEEFKKDQGIDLRNDPL IDLRNDPLAMQRLKEAAEKAKIELSSAQQT E E F K E A 1 2 1 3 0 2 2 1 0 1 3 3 1 1 1 0 0 0 0 0 0 0 22 5 1 2 2643.3803 P0A6Y8 P0A6Y8 243 264 dnaK Chaperone protein DnaK yes yes 4;5 0.00068139 27.904 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 2 1 2 1 2 70216000 4905400 4137900 11902000 13366000 5315000 8357300 3972500 18260000 876 86 948 5130;5131;5132;5133;5134;5135;5136;5137;5138;5139;5140;5141 3782;3783;3784;3785;3786;3787 3785 6 75370000 63103000 101130000 101330000 81829000 126670000 30573000 104790000 EFLSGKKAA ______________________________ ______________________________ M E F A A A 2 0 0 0 0 0 1 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 9 2 1 1 949.52328 LSD1-FL-His LSD1-FL-His 2 10 yes yes 2 8.273E-16 136.27 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 36395000 5638900 3519900 0 0 9911800 17325000 0 0 877 24 949 5142;5143;5144;5145;5146;5147;5148;5149 3788;3789;3790;3791;3792;3793 3791 5 34039000 21067000 0 0 13535000 24696000 0 0 EFLSGKKAAA ______________________________ ______________________________ M E F A A A 3 0 0 0 0 0 1 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 10 2 1 2 1020.5604 LSD1-FL-His LSD1-FL-His 2 11 yes yes 2 4.5187E-07 113.71 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 3 139860000 51626000 5129200 0 0 30632000 52474000 0 0 878 24 950 5150;5151;5152;5153;5154;5155;5156;5157;5158;5159;5160 3794;3795;3796;3797 3797 3 740090000 30698000 0 0 440380000 518710000 0 0 EFLSGKKAAAAAAAAAAAATGTE ______________________________ AAAAAAAAAAATGTEAGPGTAGGSENGSEV M E F T E A 12 0 0 0 0 0 2 2 0 0 1 2 0 1 0 1 2 0 0 0 0 0 23 2 1 12 2048.0538 LSD1-FL-His LSD1-FL-His 2 24 yes yes 2;3 2.7679E-130 187.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 136900000 3321600 5749200 7480000 12083000 0 0 18816000 89454000 879 24 951 5161;5162;5163;5164;5165;5166;5167;5168 3798;3799 3799 2 51036000 87676000 63557000 91608000 0 0 144810000 513360000 EFLVKSKHRDLTA YKEASEVKPPRDITAEFLVKSKHRDLTALC TAEFLVKSKHRDLTALCKEYDELAETQGKL A E F T A L 1 1 0 1 0 0 1 0 1 0 2 2 0 1 0 1 1 0 0 1 0 0 13 3 1 0 1542.8518 LSD1-FL-His LSD1-FL-His 479 491 yes yes 2;3 2.8005E-23 92.856 By MS/MS By MS/MS By MS/MS 1 2 1 18141000 620660 0 0 0 14811000 2708500 0 0 880 24 952 5169;5170;5171;5172 3800;3801;3802 3800 2 3746600 0 0 0 21087000 3861000 0 0 EFSHNVVLAN KRANDIALKCKYCEKEFSHNVVLAN_____ KYCEKEFSHNVVLAN_______________ K E F A N - 1 0 2 0 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 2 0 0 10 0 1 1 1128.5564 P0A7F3 P0A7F3 144 153 pyrI Aspartate carbamoyltransferase regulatory chain yes yes 2 0.0020563 76.478 By MS/MS By MS/MS 1 1 6918300 4188200 2730100 0 0 0 0 0 0 881 103 953 5173;5174 3803;3804 3804 0 4188200 2794500 0 0 0 0 0 0 EFVYSNLR KALKIYPWVCGRCSREFVYSNLRELTVHHI VCGRCSREFVYSNLRELTVHHIDHDHTNNP R E F L R E 0 1 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 8 0 1 0 1026.5134 P0AAQ2 P0AAQ2 33 40 yajD Uncharacterized protein YajD yes yes 2 3.8099E-08 125.01 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 810720000 84129000 55725000 149160000 107230000 31578000 35067000 141140000 206710000 882 188 954 5175;5176;5177;5178;5179;5180;5181;5182 3805;3806 3805 2 84129000 57040000 1267400000 812950000 38092000 38847000 1086200000 1186300000 EFYEKPTTER RSCEKAGVLAEVRRREFYEKPTTERKRAKA EVRRREFYEKPTTERKRAKASAVKRHAKKL R E F E R K 0 1 0 0 0 0 3 0 0 0 0 1 0 1 1 0 2 0 1 0 0 0 10 1 3 1 1298.6143 P68679 P68679 36 45 rpsU 30S ribosomal protein S21 yes yes 2;3 1.2228E-27 144.12 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 259960000 65451000 90695000 0 0 31830000 71979000 0 0 883 402 955 5183;5184;5185;5186;5187;5188;5189;5190 3807;3808;3809;3810;3811;3812;3813;3814;3815;3816 3810 9 65451000 92835000 0 0 38397000 79737000 0 0 EGADTLITAGAIQSNHVR NKLRKLEFLAADALREGADTLITAGAIQSN DTLITAGAIQSNHVRQTAAVAAKLGLHCVA R E G V R Q 3 1 1 1 0 1 1 2 1 2 1 0 0 0 0 1 2 0 0 1 0 0 18 0 1 3 1851.9439 P76316 P76316 65 82 dcyD D-cysteine desulfhydrase yes yes 3 0.011003 26.412 By MS/MS 1 20401000 0 0 0 0 0 20401000 0 0 884 422 956 5191 3817 3817 1 0 0 0 0 0 22600000 0 0 EGEDEFLDDWR ITKEDRGTEITLHLREGEDEFLDDWRVRSI LHLREGEDEFLDDWRVRSIISKYSDHIALP R E G W R V 0 1 0 3 0 0 3 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 11 0 3 0 1409.5735 P0A6Z3 P0A6Z3 182 192 htpG Chaperone protein HtpG yes yes 2 3.3717E-31 148.96 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60306000 19628000 17432000 0 0 11850000 11395000 0 0 885 88 957 5192;5193;5194;5195 3818;3819;3820;3821 3818 4 19628000 17844000 0 0 14295000 12624000 0 0 EGEIDIAK RMYMREMGTVELLTREGEIDIAKRIEDGIN TVELLTREGEIDIAKRIEDGINQVQCSVAE R E G A K R 1 0 0 1 0 0 2 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 8 0 2 1 873.44436 P00579 P00579 114 121 rpoD RNA polymerase sigma factor RpoD yes yes 1;2 6.7735E-07 90.308 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 536580000 161680000 179100000 0 0 122720000 73081000 0 0 886 27 958 5196;5197;5198;5199;5200 3822;3823;3824;3825 3824 3 161680000 183330000 0 0 148040000 80957000 0 0 EGELITR LESGWKWKYLVKKHREGELITRYIEASAAQ KYLVKKHREGELITRYIEASAAQEAVDVLL R E G T R Y 0 1 0 0 0 0 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 2 0 816.43413 P0A8N0 P0A8N0 24 30 matP Macrodomain Ter protein yes yes 2 0.0090376 57.177 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 78121000 22456000 21936000 0 0 15655000 18073000 0 0 887 149 959 5201;5202;5203;5204;5205;5206;5207 3826 3826 1 36365000 36263000 0 0 18884000 21756000 0 0 EGENVVGSETR YASVRLDIRRIGAVKEGENVVGSETRVKVV GAVKEGENVVGSETRVKVVKNKIAAPFKQA K E G T R V 0 1 1 0 0 0 3 2 0 0 0 0 0 0 0 1 1 0 0 2 0 0 11 0 3 0 1175.5418 P0A7G6 P0A7G6 234 244 recA Protein RecA yes yes 2 1.921E-17 133.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 78650000 18715000 25941000 0 0 14962000 19032000 0 0 888 104 960 5208;5209;5210;5211 3827;3828;3829;3830 3830 4 18715000 26554000 0 0 18049000 21083000 0 0 EGFEVTYLAPQR TEHKAVLDTCRQLEREGFEVTYLAPQRNGI LEREGFEVTYLAPQRNGIIDLKELEAAMRD R E G Q R N 1 1 0 0 0 1 2 1 0 0 1 0 0 1 1 0 1 0 1 1 0 0 12 0 2 2 1408.6987 P0A6B7 P0A6B7 117 128 iscS Cysteine desulfurase IscS yes yes 2 2.0253E-18 103.55 By MS/MS By MS/MS By MS/MS 1 1 1 6499600 0 6499600 0 0 0 0 0 0 889 67 961 5212;5213;5214 3831;3832;3833 3833 3 0 6653100 0 0 0 0 0 0 EGGIYTPALR HGEQERLQLALKVLREGGIYTPALREIESY LKVLREGGIYTPALREIESYDAVLVLGEDV R E G L R E 1 1 0 0 0 0 1 2 0 1 1 0 0 0 1 0 1 0 1 0 0 0 10 0 1 2 1075.5662 P33602 P33602 358 367 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.00015484 108.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 307720000 91001000 74184000 0 0 51041000 71857000 0 19635000 890 345 962 5215;5216;5217;5218;5219;5220 3834;3835;3836;3837 3837 4 91001000 85986000 0 0 61571000 79601000 0 112680000 EGLDIKLNTAVRQVRYTA LTVRNGYSCVPVALAEGLDIKLNTAVRQVR DIKLNTAVRQVRYTASGCEVIAVNTRSTSQ A E G T A S 2 2 1 1 0 1 1 1 0 1 2 1 0 0 0 0 2 0 1 2 0 0 18 3 1 1 2046.1222 LSD1-FL-His LSD1-FL-His 582 599 yes yes 3;4 4.1231E-05 51.606 By MS/MS By MS/MS By MS/MS 2 2 2 18132000 1678900 0 0 0 3751800 12702000 0 0 891 24 963 5221;5222;5223;5224;5225;5226 3838;3839;3840;3841 3840 4 10135000 0 0 0 5341400 18106000 0 0 EGLIAVVSVK YSKKAKVSATGDDAREGLIAVVSVKVPDPK GDDAREGLIAVVSVKVPDPKFSSQTKDKLV R E G V K V 1 0 0 0 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 3 0 0 10 0 1 1 1013.6121 P0AES6 P0AES6 317 326 gyrB DNA gyrase subunit B yes yes 2 0.00042617 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54249000 15682000 9960500 0 0 14386000 14220000 0 0 892 239 964 5227;5228;5229;5230 3842;3843;3844;3845 3845 4 15682000 10196000 0 0 17354000 15753000 0 0 EGLLDCPHYTRP GVLGHEASATEDSFAEGLLDCPHYTRPEVL SFAEGLLDCPHYTRPEVLEGMEVPPVLLSG A E G R P E 0 1 0 1 1 0 1 1 1 0 2 0 0 0 2 0 1 0 1 0 0 0 12 1 1 1 1456.6769 P0A873 P0A873 173 184 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 3 0.021587 19.641 By MS/MS 1 2140800 0 0 0 0 0 2140800 0 0 893 140 965 5231 3846 3846 0 0 0 0 0 0 3051800 0 0 EGLNVLQYFISTHGAR PDGSIIETPITANFREGLNVLQYFISTHGA GLNVLQYFISTHGARKGLADTALKTANSGY R E G A R K 1 1 1 0 0 1 1 2 1 1 2 0 0 1 0 1 1 0 1 1 0 0 16 0 1 1 1803.9268 P0A8T7 P0A8T7 765 780 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 0.00064212 52.372 By MS/MS 1 31026000 0 31026000 0 0 0 0 0 0 894 153 966 5232 3847 3847 0 0 31758000 0 0 0 0 0 0 EGLQFTLFR SKQLLDRVIWAYGEKEGLQFTLFRPFNWMG WAYGEKEGLQFTLFRPFNWMGPRLDNLNAA K E G F R P 0 1 0 0 0 1 1 1 0 0 2 0 0 2 0 0 1 0 0 0 0 0 9 0 1 0 1109.5869 P77398 P77398 481 489 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 2.0873E-109 205.7 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2038000000 672090000 587740000 0 0 351510000 426650000 0 0 895 432 967 5233;5234;5235;5236;5237 3848;3849;3850;3851 3848 4 678900000 601610000 0 0 424020000 472630000 0 0 EGLQFTLFRPFNWMGPR SKQLLDRVIWAYGEKEGLQFTLFRPFNWMG LQFTLFRPFNWMGPRLDNLNAARIGSSRAI K E G P R L 0 2 1 0 0 1 1 2 0 0 2 0 1 3 2 0 1 1 0 0 0 0 17 1 1 2 2095.0462 P77398 P77398 481 497 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 8.0599E-46 147.35 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1554400000 260570000 251050000 0 0 600240000 442550000 0 0 896 432 968;969 5238;5239;5240;5241;5242;5243;5244;5245 3852;3853;3854;3855;3856;3857;3858 3857 331 7 260570000 256970000 0 0 724080000 490250000 0 0 EGLVHISQIADK RIVDFGAFVAIGGGKEGLVHISQIADKRVE GGKEGLVHISQIADKRVEKVTDYLQMGQEV K E G D K R 1 0 0 1 0 1 1 1 1 2 1 1 0 0 0 1 0 0 0 1 0 0 12 0 1 1 1308.7038 P05055 P05055 646 657 pnp Polyribonucleotide nucleotidyltransferase yes yes 2;3 4.7187E-07 109.16 By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 28083000 3993600 2766700 0 0 15157000 6166200 0 0 897 48 970 5246;5247;5248;5249;5250 3859;3860;3861 3861 3 3993600 2832000 0 0 18284000 6830700 0 0 EGLVHISQIADKR RIVDFGAFVAIGGGKEGLVHISQIADKRVE GKEGLVHISQIADKRVEKVTDYLQMGQEVP K E G K R V 1 1 0 1 0 1 1 1 1 2 1 1 0 0 0 1 0 0 0 1 0 0 13 1 1 1 1464.8049 P05055 P05055 646 658 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 0.0168 25.322 By MS/MS By matching 1 2 16612000 0 11238000 0 0 5373700 0 0 0 898 48 971 5251;5252;5253 3862 3862 1 0 11504000 0 0 6597400 0 0 0 EGNDFYHEMTDSNVIDK HSGYSVFAGVGERTREGNDFYHEMTDSNVI NDFYHEMTDSNVIDKVSLVYGQMNEPPGNR R E G D K V 0 0 2 3 0 0 2 1 1 1 0 1 1 1 0 1 1 0 1 1 0 0 17 0 2 0 2012.8422 P0ABB4 P0ABB4 186 202 atpD ATP synthase subunit beta yes yes 3 0.0056734 32.507 By matching By matching By MS/MS By MS/MS 1 1 1 1 25823000 5857800 4616400 0 0 6058500 9290600 0 0 899 194 972 5254;5255;5256;5257 3863 3863 1 5857800 4725400 0 0 7308300 10292000 0 0 EGNPNLSFIYLK IVCSALKKHYRDLLREGNPNLSFIYLKGDF LLREGNPNLSFIYLKGDFDVIESRLKARKG R E G L K G 0 0 2 0 0 0 1 1 0 1 2 1 0 1 1 1 0 0 1 0 0 0 12 0 1 1 1393.7242 P46859 P46859 100 111 gntK Thermoresistant gluconokinase yes yes 2 1.9878E-07 123.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 199150000 51960000 56684000 0 0 30658000 59851000 0 0 900 372 973 5258;5259;5260;5261 3864;3865;3866;3867 3867 4 51960000 58022000 0 0 36983000 66302000 0 0 EGPAEDFANQEAIAK EKYQTFWQQFGLVLKEGPAEDFANQEAIAK EGPAEDFANQEAIAKLLRFASTHTDSSAQT K E G A K L 4 0 1 1 0 1 3 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 15 0 3 5 1588.7369 P0A6Z3 P0A6Z3 384 398 htpG Chaperone protein HtpG yes yes 2 4.3002E-146 212.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 146480000 44124000 40374000 0 0 24408000 37572000 0 0 901 88 974 5262;5263;5264;5265 3868;3869;3870;3871 3869 4 44124000 41327000 0 0 29443000 41621000 0 0 EGQEVIVQIDKEER NYSAHGRPNIKDVLREGQEVIVQIDKEERG REGQEVIVQIDKEERGNKGAALTTFISLAG R E G E R G 0 1 0 1 0 2 4 1 0 2 0 1 0 0 0 0 0 0 0 2 0 0 14 1 4 0 1670.8475 P21513 P21513 96 109 rne Ribonuclease E yes yes 3 0.00031566 61.732 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52456000 16645000 12319000 0 0 9478500 14013000 0 0 902 297 975 5266;5267;5268;5269 3872;3873;3874 3873 3 16645000 12610000 0 0 11434000 15524000 0 0 EGQNLDFVGGAE IGRRSDWKKAYVTLKEGQNLDFVGGAE___ TLKEGQNLDFVGGAE_______________ K E G A E - 1 0 1 1 0 1 2 3 0 0 1 0 0 1 0 0 0 0 0 1 0 0 12 0 1 1 1234.5466 P0ADZ0 P0ADZ0 89 100 rplW 50S ribosomal protein L23 yes yes 2 0.0079874 47.198 By matching By matching By MS/MS By MS/MS 1 1 1 1 15650000 2464700 3283900 0 0 4044500 5857000 0 0 903 230 976 5270;5271;5272;5273 3875 3875 1 2464700 3361500 0 0 4878900 6488200 0 0 EGRPSEGETLIAR RTYAAGRIPGSFFRREGRPSEGETLIARLI RREGRPSEGETLIARLIDRPIRPLFPEGFV R E G A R L 1 2 0 0 0 0 3 2 0 1 1 0 0 0 1 1 1 0 0 0 0 0 13 1 3 2 1413.7212 P05055 P05055 81 93 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 9.5361E-48 162.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54957000 13508000 11723000 0 0 11898000 17828000 0 0 904 48 977 5274;5275;5276;5277 3876;3877;3878;3879;3880 3879 5 13508000 12000000 0 0 14352000 19749000 0 0 EGSSLLGSDAGELAGAGK ALALEGVQLGAALEREGSSLLGSDAGELAG SLLGSDAGELAGAGKTGVTVQSSLDAVKDD R E G G K T 3 0 0 1 0 0 2 5 0 0 3 1 0 0 0 3 0 0 0 0 0 0 18 0 2 3 1617.7846 P04036 P04036 40 57 dapB 4-hydroxy-tetrahydrodipicolinate reductase yes yes 2 2.5264E-11 81.494 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 38539000 8784400 6321200 0 0 14997000 8436600 0 0 905 43 978 5278;5279;5280;5281 3881;3882;3883 3881 3 8784400 6470400 0 0 18091000 9345900 0 0 EGTDLFLK ______________________________ KLKLSRREGTDLFLKSGVRAIDTKCKIEQA R E G L K S 0 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 8 0 1 0 921.48075 P0A7V8 P0A7V8 15 22 rpsD 30S ribosomal protein S4 yes yes 2 0.00049819 102.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 568280000 144340000 156040000 0 0 124510000 143380000 0 0 906 130 979 5282;5283;5284;5285 3884;3885;3886;3887 3885 4 144340000 159720000 0 0 150190000 158840000 0 0 EGTDLFLKSGVR ______________________________ SRREGTDLFLKSGVRAIDTKCKIEQAPGQH R E G V R A 0 1 0 1 0 0 1 2 0 0 2 1 0 1 0 1 1 0 0 1 0 0 12 1 1 0 1320.7038 P0A7V8 P0A7V8 15 26 rpsD 30S ribosomal protein S4 yes yes 2 8.1004E-05 57.804 By MS/MS 1 0 0 0 0 0 0 0 0 0 907 130 980 5286 3888 3888 16 0 0 0 0 0 0 0 0 0 EGVNSTESGLQFR MAAEGVKYLEENAKKEGVNSTESGLQFRVI KKEGVNSTESGLQFRVINQGEGAIPARTDR K E G F R V 0 1 1 0 0 1 2 2 0 0 1 0 0 1 0 2 1 0 0 1 0 0 13 0 2 0 1422.6739 P0A9L3 P0A9L3 95 107 fklB FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase yes yes 2 0.00043339 49.35 By MS/MS 1 0 0 0 0 0 0 0 0 0 908 170 981 5287 3889 3889 1 0 0 0 0 0 0 0 0 EGVSDEAAAEHIR HHFNEDIRDITLSHKEGVSDEAAAEHIRQH HKEGVSDEAAAEHIRQHIPEHDVLLAGFPC K E G I R Q 3 1 0 1 0 0 3 1 1 1 0 0 0 0 0 1 0 0 0 1 0 0 13 0 3 3 1382.6426 P0AED9 P0AED9 150 162 dcm DNA-cytosine methyltransferase yes yes 2;3 1.0088E-183 243.53 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 628270000 197250000 177640000 0 0 124550000 128840000 0 0 909 235 982 5288;5289;5290;5291;5292;5293;5294;5295 3890;3891;3892;3893;3894;3895;3896;3897;3898 3898 8 197250000 181830000 0 0 150240000 142730000 0 0 EGVSKDDAEALKK KEAKDLVESAPAALKEGVSKDDAEALKKAL LKEGVSKDDAEALKKALEEAGAEVEVK___ K E G K K A 2 0 0 2 0 0 2 1 0 0 1 3 0 0 0 1 0 0 0 1 0 0 13 2 2 2 1388.7147 P0A7K2 P0A7K2 97 109 rplL 50S ribosomal protein L7/L12 yes yes 3 2.2235E-46 134.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 121120000 36389000 45986000 0 0 20165000 18580000 0 0 910 108 983 5296;5297;5298;5299 3899;3900;3901;3902 3899 4 36389000 47071000 0 0 24325000 20583000 0 0 EGYEQSHFR STNVKRHDAHRFYLREGYEQSHFRFTKAL_ HRFYLREGYEQSHFRFTKAL__________ R E G F R F 0 1 0 0 0 1 2 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 2 0 1151.4996 P16691 P16691 131 139 phnO Protein PhnO yes yes 2;3 7.9114E-28 152.63 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 227710000 70483000 82488000 0 0 29161000 45574000 0 0 911 286 984 5300;5301;5302;5303;5304;5305;5306;5307;5308 3903;3904;3905;3906;3907;3908 3903 6 70483000 84435000 0 0 35177000 50486000 0 0 EGYVNLLPVQHK NSYICPQRHQFDMAKEGYVNLLPVQHKRSR MAKEGYVNLLPVQHKRSRDPGDSAEMMQAR K E G H K R 0 0 1 0 0 1 1 1 1 0 2 1 0 0 1 0 0 0 1 2 0 0 12 0 1 1 1395.751 P36999 P36999 32 43 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 2.2923E-118 200.86 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1456700000 334940000 454890000 0 0 320510000 346400000 0 0 912 352 985 5309;5310;5311;5312;5313;5314;5315;5316 3909;3910;3911;3912;3913;3914;3915;3916;3917 3915 9 334940000 465630000 0 0 386630000 383730000 0 0 EHFTSVVGADQDDAEMLAEELR NDPFPIVALDRALDREHFTSVVGADQDDAE GADQDDAEMLAEELRKFPAETVLYLGALPE R E H L R K 3 1 0 3 0 1 4 1 1 0 2 0 1 1 0 1 1 0 0 2 0 0 22 0 4 3 2461.1067 P0ACP1 P0ACP1 154 175 cra Catabolite repressor/activator yes yes 3 5.2705E-15 88.755 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 33050000 9395300 4495700 0 0 7902300 11257000 0 0 913 217 986 5317;5318;5319;5320 3918;3919 3919 2 9395300 4601800 0 0 9532600 12470000 0 0 EHILLGR ILVVAATDGPMPQTREHILLGRQVGVPYII DGPMPQTREHILLGRQVGVPYIIVFLNKCD R E H G R Q 0 1 0 0 0 0 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 836.48684 P0CE48;P0CE47 P0CE48 118 124 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 2.5991E-34 159.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 148590000 28258000 41426000 0 0 41108000 37794000 0 0 914 269 987 5321;5322;5323;5324 3920;3921;3922;3923 3921 4 28258000 42403000 0 0 49589000 41867000 0 0 EHIPVLVYGPK DHGCDPTWTGTDHTREHIPVLVYGPKVKPG DHTREHIPVLVYGPKVKPGSLGHRETFADI R E H P K V 0 0 0 0 0 0 1 1 1 1 1 1 0 0 2 0 0 0 1 2 0 0 11 0 1 2 1250.7023 P0A6K6 P0A6K6 362 372 deoB Phosphopentomutase yes yes 2;3 9.711E-09 115.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 159840000 49158000 36069000 0 0 37418000 37195000 0 0 915 75 988 5325;5326;5327;5328;5329;5330;5331;5332 3924;3925;3926;3927;3928 3928 5 49158000 36921000 0 0 45138000 41204000 0 0 EHLGTGDVK KKPQDLFDEFAGKHKEHLGTGDVKYHMGFS FAGKHKEHLGTGDVKYHMGFSSDFQTDGGL K E H V K Y 0 0 0 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1 0 954.47706 P0AFG3 P0AFG3 288 296 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0021052 77.058 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38903000 12060000 14237000 0 0 5320100 7285900 0 0 916 246 989 5333;5334;5335;5336 3929 3929 1 12060000 14573000 0 0 6417700 8071200 0 0 EHLQMPEQR IKPYLLNNGQNPPAREHLQMPEQREKLDGL QNPPAREHLQMPEQREKLDGLYECILCACC R E H Q R E 0 1 0 0 0 2 2 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 9 0 2 1 1166.5502 P07014 P07014 132 140 sdhB Succinate dehydrogenase iron-sulfur subunit yes yes 2 0.0032611 72.485 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 7051700 1812000 1831100 0 0 1690100 1718500 0 0 917 56 990 5337;5338;5339;5340 3930;3931;3932 3931 3 1812000 1874300 0 0 2038800 1903700 0 0 EHLYERDE QPTRLLLEYLEEKYEEHLYERDEGDKWRNK YLEEKYEEHLYERDEGDKWRNKKFELGLEF E E H D E G 0 1 0 1 0 0 3 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 8 1 2 0 1089.4727 GST-Nek6 GST-Nek6 30 37 yes yes 2 0.018043 44.961 By MS/MS By MS/MS By MS/MS 1 1 1 8787300 0 0 0 0 0 1490500 2834800 4462000 918 23 991 5341;5342;5343 3933;3934 3934 0 0 0 0 0 0 22591000 21817000 25607000 EHMPHIDTR YYGGPLIGNALSTMREHMPHIDTRVAAIFR ALSTMREHMPHIDTRVAAIFRHDRPIRPQG R E H T R V 0 1 0 1 0 0 1 0 2 1 0 0 1 0 1 0 1 0 0 0 0 0 9 0 1 1 1134.524 P0AGI8 P0AGI8 176 184 trkA Trk system potassium uptake protein TrkA yes yes 3 0.0012102 60.518 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19716000 4591100 6707400 0 0 5097700 3319700 0 0 919 264 992 5344;5345;5346;5347 3935;3936;3937;3938 3935 4 4591100 6865700 0 0 6149400 3677400 0 0 EHNAEVTGFIR PFVMEPSKTVGQLLKEHNAEVTGFIRFEVG QLLKEHNAEVTGFIRFEVGEGIEKVETDFA K E H I R F 1 1 1 0 0 0 2 1 1 1 0 0 0 1 0 0 1 0 0 1 0 0 11 0 2 1 1271.6258 P0A6P1 P0A6P1 248 258 tsf Elongation factor Ts yes yes 3 5.6667E-06 87.363 By matching By matching By MS/MS By MS/MS 1 1 1 1 23303000 4925800 5825800 0 0 5831100 6720200 0 0 920 77 993 5348;5349;5350;5351 3939;3940 3940 2 4925800 5963300 0 0 7034000 7444500 0 0 EHNYHPNAVAAGLR RVSDKTVEKVMAVVREHNYHPNAVAAGLRA REHNYHPNAVAAGLRAGRTRSIGLVIPDLE R E H L R A 3 1 2 0 0 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 0 0 14 0 1 4 1547.7593 P0ACP1 P0ACP1 44 57 cra Catabolite repressor/activator yes yes 3 5.9246E-33 115.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87647000 20602000 27141000 0 0 19260000 20644000 0 0 921 217 994 5352;5353;5354;5355 3941;3942;3943;3944 3942 0 20602000 27782000 0 0 23234000 22869000 0 0 EHPESYYSFMHR HVVTFNMDEYVGLPKEHPESYYSFMHRNFF LPKEHPESYYSFMHRNFFDHVDIPAENINL K E H H R N 0 1 0 0 0 0 2 0 2 0 0 0 1 1 1 2 0 0 2 0 0 0 12 0 2 1 1581.6671 P0A759 P0A759 80 91 nagB Glucosamine-6-phosphate deaminase yes yes 3 2.5202E-57 167.18 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 68363000 15994000 14449000 0 0 18923000 18996000 0 0 922 96 995 5356;5357;5358;5359 3945;3946;3947;3948 3948 4 15994000 14790000 0 0 22827000 21044000 0 0 EHPLHGGTGIAHTRWATHGEPSE LRRLGKVQMLAQAAEEHPLHGGTGIAHTRW GIAHTRWATHGEPSEVNAHPHVSEHIVVVH E E H S E V 2 1 0 0 0 0 3 4 4 1 1 0 0 0 2 1 3 1 0 0 0 0 23 1 2 4 2476.1632 P17169 P17169 61 83 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4 0.0040567 21.616 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 2 1 1 75351000 3441200 5005200 11191000 16263000 5487800 4233500 13926000 15804000 923 288 996 5360;5361;5362;5363;5364;5365;5366;5367;5368 3949;3950;3951;3952;3953 3951 5 52873000 76329000 95090000 123300000 84489000 36179000 107180000 90695000 EHPVLLNR REEAVVWDILDEVIREHPVLLNRAPTLHRL ILDEVIREHPVLLNRAPTLHRLGIQAFEPV R E H N R A 0 1 1 0 0 0 1 0 1 0 2 0 0 0 1 0 0 0 0 1 0 0 8 0 1 1 976.54541 P0A8T7 P0A8T7 418 425 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0040379 65.672 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36614000 8722700 10139000 0 0 8083100 9669400 0 0 924 153 997 5369;5370;5371;5372 3954;3955;3956 3955 3 8722700 10378000 0 0 9750700 10712000 0 0 EIADGLASAER YVWPPLMAAIEKRQKEIADGLASAERAHKD KRQKEIADGLASAERAHKDLDLAKASATDQ K E I E R A 3 1 0 1 0 0 2 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 11 0 2 3 1130.5568 P0ABA0 P0ABA0 39 49 atpF ATP synthase subunit b yes yes 2 0.00028672 53.751 By MS/MS 1 0 0 0 0 0 0 0 0 0 925 192 998 5373 3957 3957 1 0 0 0 0 0 0 0 0 EIELEDK FGAPTITKDGVSVAREIELEDKFENMGAQM KDGVSVAREIELEDKFENMGAQMVKEVASK R E I D K F 0 0 0 1 0 0 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 3 0 874.42838 P0A6F5 P0A6F5 59 65 groL 60 kDa chaperonin yes yes 2 5.5523E-07 120.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 71058000 17252000 15780000 0 0 20883000 17143000 0 0 926 68 999 5374;5375;5376;5377;5378 3958;3959;3960;3961;3962;3963 3963 6 17252000 16153000 0 0 25391000 18990000 0 0 EIELEDKFENMGAQMVK FGAPTITKDGVSVAREIELEDKFENMGAQM ELEDKFENMGAQMVKEVASKANDAAGDGTT R E I V K E 1 0 1 1 0 1 4 1 0 1 1 2 2 1 0 0 0 0 0 1 0 0 17 1 4 1 2009.9438 P0A6F5 P0A6F5 59 75 groL 60 kDa chaperonin yes yes 2;3 0 365.6 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 3 3 2 2 6 6 1 1479000000 274300000 62745000 1698900 1802700 578600000 553680000 6128800 0 927 68 1000;1001;1002 5379;5380;5381;5382;5383;5384;5385;5386;5387;5388;5389;5390;5391;5392;5393;5394;5395;5396;5397;5398;5399;5400;5401 3964;3965;3966;3967;3968;3969;3970;3971;3972;3973;3974;3975;3976 3972 78;79 13 274300000 80389000 14436000 13667000 787220000 701310000 47169000 0 EIETRPGSIVR ______________________________ ESLKEIETRPGSIVRGVVVAIDKDVVLVDA K E I V R G 0 2 0 0 0 0 2 1 0 2 0 0 0 0 1 1 1 0 0 1 0 0 11 1 2 1 1255.6884 P0AG67 P0AG67 15 25 rpsA 30S ribosomal protein S1 yes yes 3 0.0039236 45.829 By MS/MS By MS/MS 1 1 5277400 0 5277400 0 0 0 0 0 0 928 261 1003 5402;5403 3977;3978 3977 2 0 5402000 0 0 0 0 0 0 EIETYHNLLEGGQEDFESSGAGK QEYSLLLSIKMRLEKEIETYHNLLEGGQED LEGGQEDFESSGAGKIGLGGRGGSGGSYGR K E I G K I 1 0 1 1 0 1 5 4 1 1 2 1 0 1 0 2 1 0 1 0 0 0 23 0 5 1 2509.1245 CON__P35527 CON__P35527 450 472 yes yes 3 7.3691E-304 261.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1372400000 171770000 216260000 0 0 405610000 578780000 0 0 + 929 15 1004 5404;5405;5406;5407 3979;3980;3981;3982;3983 3980 5 171770000 221370000 0 0 489280000 641160000 0 0 EIIHIGQA TKEILGIHCFGERAAEIIHIGQAIMEQKGG CFGERAAEIIHIGQAIMEQKGGGNTIEYFV A E I Q A I 1 0 0 0 0 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1 0 879.48142 P27306 P27306 419 426 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 0.005932 92.191 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31967000 2532500 2998000 0 0 16285000 10152000 0 0 930 323 1005 5408;5409;5410;5411 3984 3984 1 15287000 17943000 0 0 23185000 14472000 0 0 EIKELLA PVELIATLDDSAKSAEIKELLAEIAELSDK LDDSAKSAEIKELLAEIAELSDKVTFKEDN A E I L A E 1 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 7 1 2 0 814.48002 P35340 P35340 35 41 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.00074501 81.381 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 167230000 18891000 20395000 0 0 37170000 90773000 0 0 931 348 1006 5412;5413;5414;5415 3985;3986 3985 2 114030000 122060000 0 0 52919000 129400000 0 0 EILEDYAGGMR KNPGLWELPFGTTAREILEDYAGGMRDGLK TTAREILEDYAGGMRDGLKFKAWQPGGAGT R E I M R D 1 1 0 1 0 0 2 2 0 1 1 0 1 0 0 0 0 0 1 0 0 0 11 0 2 1 1252.5758 P31979 P31979 272 282 nuoF NADH-quinone oxidoreductase subunit F yes yes 2 0.0002619 76.064 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21791000 4966000 3386400 0 0 6132000 7306200 0 0 932 336 1007 5416;5417;5418;5419 3987;3988;3989 3989 3 4966000 3466400 0 0 7397100 8093600 0 0 EILGIHCFGER MNVGTLKILFHRETKEILGIHCFGERAAEI RETKEILGIHCFGERAAEIIHIGQAIMEQK K E I E R A 0 1 0 0 1 0 2 2 1 2 1 0 0 1 0 0 0 0 0 0 0 0 11 0 2 0 1329.65 P27306 P27306 406 416 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 0.0018317 51.013 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52707000 15504000 13350000 0 0 15860000 7994100 0 0 933 323 1008 5420;5421;5422;5423 3990;3991;3992;3993 3993 4 15504000 13665000 0 0 19132000 8855700 0 0 EIMQVALNQAK ISALQMDIKIEGITKEIMQVALNQAKGARL GITKEIMQVALNQAKGARLHILGVMEQAIN K E I A K G 2 0 1 0 0 2 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1 2 1243.6595 P05055 P05055 517 527 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 3.4777E-32 153.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44687000 10299000 7495800 0 0 12639000 14254000 0 0 934 48 1009 5424;5425;5426;5427 3994;3995;3996;3997 3997 4 10299000 7672800 0 0 15246000 15790000 0 0 EINGVEDR EGNQQIILTSDRYPKEINGVEDRLKSRFGW TSDRYPKEINGVEDRLKSRFGWGLTVAIEP K E I D R L 0 1 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 8 0 2 0 930.44067 P03004 P03004 274 281 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.0089625 54.157 By MS/MS 1 1888500 1888500 0 0 0 0 0 0 0 935 40 1010 5428 3998 3998 1 1888500 0 0 0 0 0 0 0 EISMSIK RDEVAKFVVEGDLRREISMSIKRLMDLGCY VVEGDLRREISMSIKRLMDLGCYRGLRHRR R E I I K R 0 0 0 0 0 0 1 0 0 2 0 1 1 0 0 2 0 0 0 0 0 0 7 0 1 0 806.42079 P0A7S9 P0A7S9 72 78 rpsM 30S ribosomal protein S13 yes yes 2 0.0024379 81.297 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 3 1 97383000 20009000 24523000 1184000 1571500 27908000 22187000 0 0 936 123 1011 5429;5430;5431;5432;5433;5434;5435;5436 3999;4000;4001;4002 4002 4 20009000 25102000 10060000 11914000 38563000 24578000 0 0 EISYIHAEAYAAGELK GDQYPIALEGALKLKEISYIHAEAYAAGEL ISYIHAEAYAAGELKHGPLALIDADMPVIV K E I L K H 4 0 0 0 0 0 3 1 1 2 1 1 0 0 0 1 0 0 2 0 0 0 16 0 3 4 1763.873 P17169 P17169 489 504 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 0 329.49 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 675650000 21612000 16343000 0 0 314110000 323590000 0 0 937 288 1012 5437;5438;5439;5440;5441;5442;5443;5444;5445 4003;4004;4005;4006;4007;4008;4009;4010;4011;4012 4007 10 21612000 16729000 0 0 468000000 358470000 0 0 EITLEPADNAR ______________________________ IDTREITLEPADNARLLSLCGPFDDNIKQL R E I A R L 2 1 1 1 0 0 2 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 11 0 2 3 1227.6095 P0A9K3 P0A9K3 7 17 ybeZ PhoH-like protein yes yes 2 2.4233E-05 100.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21384000 5601300 4143000 0 0 4493300 7146800 0 0 938 168 1013 5446;5447;5448;5449 4013;4014;4015;4016 4015 4 5601300 4240800 0 0 5420300 7917100 0 0 EITPVNIEEELK ______________________________ LAREITPVNIEEELKSSYLDYAMSVIVGRA R E I L K S 0 0 1 0 0 0 4 0 0 2 1 1 0 0 1 0 1 0 0 1 0 0 12 0 4 1 1412.7399 P0AES4 P0AES4 7 18 gyrA DNA gyrase subunit A yes yes 2 1.6498E-07 64.297 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 939 238 1014 5450;5451 4017;4018 4017 2 0 0 0 0 0 0 0 0 EITRRSVNIFDKTGA PVTRRFIFLEEGDIAEITRRSVNIFDKTGA EITRRSVNIFDKTGAEVKRQDIESNLQYDA A E I G A E 1 2 1 1 0 0 1 1 0 2 0 1 0 1 0 1 2 0 0 1 0 0 15 3 1 0 1705.9111 P17169 P17169 214 228 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 1.2604E-34 138.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 112570000 6707800 8000400 0 0 12527000 85334000 0 0 940 288 1015 5452;5453;5454;5455;5456;5457 4019;4020;4021;4022;4023;4024 4023 6 40492000 47882000 0 0 17835000 121640000 0 0 EIVDYLLLSHLPK AAAPWILRERGSGTREIVDYLLLSHLPKFE TREIVDYLLLSHLPKFEMAMELGNSEAIKH R E I P K F 0 0 0 1 0 0 1 0 1 1 4 1 0 0 1 1 0 0 1 1 0 0 13 0 1 1 1538.8708 P0ACR4 P0ACR4 199 211 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2;3 5.0476E-101 221.5 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1985500000 556280000 591820000 0 0 306860000 530590000 0 0 941 218 1016 5458;5459;5460;5461;5462;5463;5464;5465 4025;4026;4027;4028;4029;4030;4031;4032 4032 8 556280000 605790000 0 0 370160000 587780000 0 0 EIVSELDKHIIGQDNAK ______________________________ VSELDKHIIGQDNAKRSVAIALRNRWRRMQ R E I A K R 1 0 1 2 0 1 2 1 1 3 1 2 0 0 0 1 0 0 0 1 0 0 17 1 2 1 1907.9953 P0A6H5 P0A6H5 8 24 hslU ATP-dependent protease ATPase subunit HslU yes yes 3 7.9916E-37 138.91 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 162010000 57824000 34292000 0 0 26066000 43831000 0 0 942 71 1017 5466;5467;5468;5469 4033;4034;4035;4036 4036 4 57824000 35102000 0 0 31443000 48555000 0 0 EIYEQPNAIK YDAGDKGIYRHYMQKEIYEQPNAIKNTLTG HYMQKEIYEQPNAIKNTLTGRISHGQVDLS K E I I K N 1 0 1 0 0 1 2 0 0 2 0 1 0 0 1 0 0 0 1 0 0 0 10 0 2 2 1203.6136 P17169 P17169 256 265 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 9.0348E-58 157.33 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4899700000 1632700000 1370000000 0 0 0 1897000000 0 0 943 288 1018 5470;5471;5472;5473 4037;4038;4039;4040;4041;4042;4043 4041 7 1632700000 1402400000 0 0 0 2101500000 0 0 EIYEQPNAIKNTLTGR YDAGDKGIYRHYMQKEIYEQPNAIKNTLTG IYEQPNAIKNTLTGRISHGQVDLSELGPNA K E I G R I 1 1 2 0 0 1 2 1 0 2 1 1 0 0 1 0 2 0 1 0 0 0 16 1 2 2 1845.9585 P17169 P17169 256 271 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 6.2592E-199 232.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 389960000 171980000 142210000 0 0 31244000 44514000 0 0 944 288 1019 5474;5475;5476;5477;5478;5479;5480;5481 4044;4045;4046;4047;4048;4049 4045 6 171980000 145570000 0 0 37690000 49312000 0 0 EKDEMVEQEFNR QKCPLYEANGQAVPKEKDEMVEQEFNRLLE VPKEKDEMVEQEFNRLLEATSYLSHQLDFN K E K N R L 0 1 1 1 0 1 4 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 12 1 4 0 1552.6828 LSD1-FL-His LSD1-FL-His 375 386 yes yes 2;3 0 306.68 By MS/MS By MS/MS By MS/MS By MS/MS 10 10 9 10 65101000000 18891000000 14755000000 0 0 17120000000 14335000000 0 0 945 24 1020;1021 5482;5483;5484;5485;5486;5487;5488;5489;5490;5491;5492;5493;5494;5495;5496;5497;5498;5499;5500;5501;5502;5503;5504;5505;5506;5507;5508;5509;5510;5511;5512;5513;5514;5515;5516;5517;5518;5519;5520 4050;4051;4052;4053;4054;4055;4056;4057;4058;4059;4060;4061;4062;4063;4064;4065;4066;4067;4068;4069;4070;4071;4072;4073;4074;4075;4076;4077;4078 4074 42 29 19350000000 15285000000 0 0 21118000000 16026000000 0 0 EKDGAVEAEDR DGMLDTLRKQQATWKEKDGAVEAEDRVTID ATWKEKDGAVEAEDRVTIDFTGSVDGEEFE K E K D R V 2 1 0 2 0 0 3 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 11 1 3 2 1217.5524 P0A850 P0A850 153 163 tig Trigger factor yes yes 3 0.0039236 45.829 By MS/MS By MS/MS By MS/MS 1 1 1 10893000 3178900 5820700 0 0 0 1893300 0 0 946 137 1022 5521;5522;5523 4079;4080 4080 1 3178900 5958000 0 0 0 2097400 0 0 EKELELIR AILIHDPQLELAPQREKELELIREHTTIVK LELAPQREKELELIREHTTIVKHYRDLQSI R E K I R E 0 1 0 0 0 0 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 8 1 3 0 1028.5866 P23830 P23830 402 409 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.019289 57.177 By MS/MS 1 2482500 0 0 0 0 2482500 0 0 0 947 304 1023 5524 4081 4081 1 0 0 0 0 2994600 0 0 0 EKFAELR DSADDDNSIDPELAREKFAELRAQYVVTRD SIDPELAREKFAELRAQYVVTRDTIKAKGR R E K L R A 1 1 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 1 2 1 891.48142 P00579 P00579 219 225 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0046245 99.375 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 91774000 25261000 39269000 0 0 13128000 14115000 0 0 948 27 1024 5525;5526;5527;5528 4082;4083;4084 4082 3 25261000 40196000 0 0 15836000 15637000 0 0 EKFREDDPSAHLASPK RLLSAVRRLFQYLYREKFREDDPSAHLASP KFREDDPSAHLASPKLPQRLPKDLSEAQVE R E K P K L 2 1 0 2 0 0 2 0 1 0 1 2 0 1 2 2 0 0 0 0 0 0 16 2 2 4 1825.8959 P0A8P8 P0A8P8 89 104 xerD Tyrosine recombinase XerD yes yes 3;4 5.3285E-24 124.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 237340000 65774000 76907000 0 0 48015000 46640000 0 0 949 151 1025 5529;5530;5531;5532;5533;5534;5535;5536 4085;4086;4087;4088;4089;4090;4091;4092 4091 7 65774000 78723000 0 0 57921000 51667000 0 0 EKIKELHQQYK QEELKELLNKMVNLKEKIKELHQQYKEASE VNLKEKIKELHQQYKEASEVKPPRDITAEF K E K Y K E 0 0 0 0 0 2 2 0 1 1 1 3 0 0 0 0 0 0 1 0 0 0 11 2 2 0 1442.7882 LSD1-FL-His LSD1-FL-His 455 465 yes yes 3 6.7757E-05 84.507 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32949000 10694000 15188000 0 0 3815200 3251300 0 0 950 24 1026 5537;5538;5539;5540 4093;4094;4095 4093 3 10694000 15547000 0 0 4602300 3601700 0 0 EKISALDEK ______________________________ PLLALREKISALDEKLLALLAERRELAVEV R E K E K L 1 0 0 1 0 0 2 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 9 1 2 1 1031.5499 P0A9J8 P0A9J8 12 20 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 8.2526E-14 134.25 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 105770000 28513000 38968000 0 0 19374000 18919000 0 0 951 166 1027 5541;5542;5543;5544 4096;4097;4098;4099 4097 4 28513000 39888000 0 0 23371000 20958000 0 0 EKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSR DEYYSEEERNAKAEKEKKLPPPPPQAPPEE PEEPSGVEGAAFQSRLPHDRMTSQEAACFP K E K S R L 3 1 1 0 0 2 9 2 0 0 1 2 0 1 9 3 0 0 0 1 0 0 35 2 9 12 3782.7911 LSD1-FL-His LSD1-FL-His 150 184 yes yes 4 8.1706E-37 94.028 By MS/MS By MS/MS By matching By matching 1 1 1 1 152840000 76423000 60022000 0 0 6614600 9783900 0 0 952 24 1028 5545;5546;5547;5548 4100;4101 4100 2 76423000 61439000 0 0 7979200 10838000 0 0 EKLAQARE PAVRTPLEWRQAIYEEKLAQARESIIADNN WRQAIYEEKLAQARESIIADNNIQTLRRFF E E K R E S 2 1 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 2 1 2 943.50869 P06710 P06710 609 616 dnaX DNA polymerase III subunit tau yes yes 2;3 0.012176 99.136 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 19905000 0 0 3602200 3456100 0 0 6494300 6352700 953 51 1029 5549;5550;5551;5552;5553;5554 4102;4103;4104;4105 4105 3 0 0 30607000 26202000 0 0 49981000 36457000 EKLEGYAEAK GFVARAPEAVIAKEREKLEGYAEAKAKLIE IAKEREKLEGYAEAKAKLIEQQAVIAAL__ R E K A K A 2 0 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 10 1 3 2 1136.5714 P07118 P07118 929 938 valS Valine--tRNA ligase yes yes 2 0.0095849 68.224 By MS/MS By MS/MS By matching 1 1 1 7228900 0 2913000 0 0 2179000 2137000 0 0 954 57 1030 5555;5556;5557 4106 4106 1 0 2981700 0 0 2628500 2367300 0 0 EKNSYICPQR ______________________________ QPLSREKNSYICPQRHQFDMAKEGYVNLLP R E K Q R H 0 1 1 0 1 1 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 10 1 1 1 1293.6136 P36999 P36999 15 24 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 0.0015508 81.594 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 51325000 12838000 22261000 0 0 6564400 9661100 0 0 955 352 1031 5558;5559;5560;5561;5562;5563;5564;5565 4107;4108;4109;4110;4111;4112 4108 6 12838000 22786000 0 0 7918700 10702000 0 0 EKPTWLEVDAGK KQSRVKAALELAEQREKPTWLEVDAGKMEG EQREKPTWLEVDAGKMEGTFKRKPERSDLS R E K G K M 1 0 0 1 0 0 2 1 0 0 1 2 0 0 1 0 1 1 0 1 0 0 12 1 2 2 1371.7034 P0A7V8 P0A7V8 166 177 rpsD 30S ribosomal protein S4 yes yes 2;3 4.1644E-45 187.31 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 890170000 254240000 211400000 0 0 177840000 246690000 0 0 956 130 1032 5566;5567;5568;5569;5570;5571;5572;5573 4113;4114;4115;4116;4117;4118;4119;4120 4114 7 254240000 216390000 0 0 214520000 273280000 0 0 EKPTWLEVDAGKMEGTFK KQSRVKAALELAEQREKPTWLEVDAGKMEG TWLEVDAGKMEGTFKRKPERSDLSADINEH R E K F K R 1 0 0 1 0 0 3 2 0 0 1 3 1 1 1 0 2 1 0 1 0 0 18 2 3 2 2065.019 P0A7V8 P0A7V8 166 183 rpsD 30S ribosomal protein S4 yes yes 3 0.00052168 52.814 By MS/MS By MS/MS 1 1 18983000 10428000 8554800 0 0 0 0 0 0 957 130 1033 5574;5575 4121;4122 4121 2 10428000 8756700 0 0 0 0 0 0 ELAAFSQFASDLDDATR KKLSGGIRTALAQYRELAAFSQFASDLDDA AAFSQFASDLDDATRKQLDHGQKVTELLKQ R E L T R K 4 1 0 3 0 1 1 0 0 0 2 0 0 2 0 2 1 0 0 0 0 0 17 0 1 4 1855.8588 P0ABB0 P0ABB0 402 418 atpA ATP synthase subunit alpha yes yes 2 6.9071E-07 91.858 By matching By matching By MS/MS 1 1 1 33694000 0 11325000 0 0 9186300 13183000 0 0 958 193 1034 5576;5577;5578 4123 4123 1 0 11593000 0 0 11081000 14603000 0 0 ELAAQIGENVR KGRRPVRALILTPTRELAAQIGENVRDYSK TPTRELAAQIGENVRDYSKYLNIRSLVVFG R E L V R D 2 1 1 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 2 2 1198.6306 P25888 P25888 86 96 rhlE ATP-dependent RNA helicase RhlE yes yes 2 3.6023E-133 213.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 547790000 141950000 124510000 0 0 111770000 169560000 0 0 959 318 1035 5579;5580;5581;5582 4124;4125;4126;4127;4128;4129;4130;4131 4130 8 141950000 127450000 0 0 134830000 187830000 0 0 ELATHHVGGYLK GVRYDIAVEDPRYIKELATHHVGGYLKIAP YIKELATHHVGGYLKIAPEHTEEGPLSKMM K E L L K I 1 0 0 0 0 0 1 2 2 0 2 1 0 0 0 0 1 0 1 1 0 0 12 0 1 1 1323.6935 Q46861 Q46861 510 521 ygiQ UPF0313 protein YgiQ yes yes 3 0.00078292 58.674 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 80469000 23691000 23414000 0 0 16598000 16766000 0 0 960 441 1036 5583;5584;5585;5586 4132;4133;4134;4135 4133 4 23691000 23966000 0 0 20022000 18573000 0 0 ELAVEVGK SALDEKLLALLAERRELAVEVGKAKLLSHR ALLAERRELAVEVGKAKLLSHRPVRDIDRE R E L G K A 1 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 2 1 843.47018 P0A9J8 P0A9J8 30 37 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.00036672 104.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 756840000 222650000 192000000 0 0 141260000 146100000 0 54827000 961 166 1037 5587;5588;5589;5590;5591 4136;4137;4138;4139 4136 4 222650000 196530000 0 0 170400000 161850000 0 314640000 ELCDLDSLK TARDFMEIHLPKDLRELCDLDSLKLESASF LPKDLRELCDLDSLKLESASFVDEKLRALH R E L L K L 0 0 0 2 1 0 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 1 0 1091.5169 P39387 P39387 38 46 yjiP Putative uncharacterized protein YjiP yes yes 2 0.015907 47.067 By MS/MS By matching 1 1 20960000 0 0 0 0 10687000 10272000 0 0 962 363 1038 5592;5593 4140 4140 1 0 0 0 0 12892000 11379000 0 0 ELDLIIPR SRDVMLFISYSGGAKELDLIIPRLEDKSIA SYSGGAKELDLIIPRLEDKSIALLAMTGKP K E L P R L 0 1 0 1 0 0 1 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 8 0 1 1 967.57023 P17115 P17115 104 111 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 2 2.0472E-07 119.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24864000 5602900 7286900 0 0 5403200 6571300 0 0 963 287 1039 5594;5595;5596;5597 4141;4142;4143;4144 4142 4 5602900 7458800 0 0 6517900 7279500 0 0 ELDRRNLSVHDA IWSPDRPYLFAAVCAELDRRNLSVHDAQIF VCAELDRRNLSVHDAQIFTTRDGMAMDTFI A E L D A Q 1 2 1 2 0 0 1 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 12 2 1 0 1423.7168 P27249 P27249 727 738 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.00035904 60.49 By MS/MS By MS/MS By MS/MS 1 1 1 21475000 5060200 3820000 0 0 0 12595000 0 0 964 320 1040 5598;5599;5600 4145;4146 4146 2 30546000 22863000 0 0 0 17954000 0 0 ELEGALNR EVAFFIAKRLRSNVRELEGALNRVIANANF RLRSNVRELEGALNRVIANANFTGRAITID R E L N R V 1 1 1 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 2 1 900.46649 P03004 P03004 335 342 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.00070885 100.07 By matching By MS/MS By MS/MS By matching 1 1 1 1 21308000 4500900 4766900 0 0 5642200 6397900 0 0 965 40 1041 5601;5602;5603;5604 4147;4148 4148 2 4500900 4879400 0 0 6806200 7087500 0 0 ELEKLENSLGGIK TFDKLTKKEALMRTRELEKLENSLGGIKDM TRELEKLENSLGGIKDMGGLPDALFVIDAD R E L I K D 0 0 1 0 0 0 3 2 0 1 3 2 0 0 0 1 0 0 0 0 0 0 13 1 3 0 1428.7824 P0A7V0 P0A7V0 140 152 rpsB 30S ribosomal protein S2 yes yes 2;3 4.4863E-101 196.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 68600000 29233000 29468000 0 0 0 9898500 0 0 966 128 1042 5605;5606;5607;5608;5609;5610;5611;5612 4149;4150;4151;4152;4153;4154;4155;4156 4149 8 29233000 30164000 0 0 0 10965000 0 0 ELEVFVR PGMVFWHNDGWTIFRELEVFVRSKLKEYQY NDGWTIFRELEVFVRSKLKEYQYQEVKGPF R E L V R S 0 1 0 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 7 0 2 0 890.48617 P0A8M3 P0A8M3 276 282 thrS Threonine--tRNA ligase yes yes 2 0.00027905 107.74 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 99076000 25755000 22456000 0 0 25254000 25610000 0 0 967 147 1043 5613;5614;5615;5616 4157;4158;4159;4160 4158 4 25755000 22986000 0 0 30465000 28371000 0 0 ELFEEQAK QRFGGNEKQALELPRELFEEQAKRRVVVGL QALELPRELFEEQAKRRVVVGLLLGEVIRT R E L A K R 1 0 0 0 0 1 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 3 1 992.48148 P0A850 P0A850 335 342 tig Trigger factor yes yes 2 0.0003792 104.21 By MS/MS By MS/MS By MS/MS 1 1 1 31078000 10113000 10567000 0 0 0 10398000 0 0 968 137 1044 5617;5618;5619 4161;4162;4163 4162 3 10113000 10816000 0 0 0 11519000 0 0 ELGEITR IQANLESAEMQKALKELGEITRSMKVLGCY AEMQKALKELGEITRSMKVLGCYPSENVVP K E L T R S 0 1 0 0 0 0 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 2 0 816.43413 P0A9J8 P0A9J8 361 367 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.00029174 107.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 513320000 121890000 136550000 0 0 137720000 117150000 0 0 969 166 1045 5620;5621;5622;5623 4164;4165 4164 2 121890000 139780000 0 0 166130000 129780000 0 0 ELGFNVR GYCFEQNGVFERVLRELGFNVRSLLGRVVL GVFERVLRELGFNVRSLLGRVVLSNPPALP R E L V R S 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 1 0 833.43955 P77567 P77567 82 88 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2 2.9193E-05 116 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 202550000 50092000 34400000 14136000 10472000 40010000 53440000 0 0 970 436 1046 5624;5625;5626;5627;5628;5629 4166;4167;4168 4167 3 50092000 35212000 120110000 79398000 48264000 59200000 0 0 ELGYLGSLAICNVPGSSLVR SGETADTLAGLRLSKELGYLGSLAICNVPG GSLAICNVPGSSLVRESDLALMTNAGTEIG K E L V R E 1 1 1 0 1 0 1 3 0 1 4 0 0 0 1 3 0 0 1 2 0 0 20 0 1 2 2104.0987 P17169 P17169 365 384 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0 352.62 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 2 1 1 1022600000 183320000 225550000 0 0 355200000 258010000 0 468440 971 288 1047 5630;5631;5632;5633;5634;5635;5636 4169;4170;4171;4172 4172 4 210250000 230880000 0 0 2226700000 285820000 0 2688300 ELHQQYK KELLNKMVNLKEKIKELHQQYKEASEVKPP VNLKEKIKELHQQYKEASEVKPPRDITAEF K E L Y K E 0 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 1 0 944.47158 LSD1-FL-His LSD1-FL-His 459 465 yes yes 2 7.4976E-72 183.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24514000 7747200 8804300 0 0 5049700 2913200 0 0 972 24 1048 5637;5638;5639;5640 4173;4174;4175;4176 4175 4 7747200 9012100 0 0 6091500 3227200 0 0 ELIIGDR YKAVDSMIPIGRGQRELIIGDRQTGKTALA IPIGRGQRELIIGDRQTGKTALAIDAIINQ R E L D R Q 0 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 814.45487 P0ABB0 P0ABB0 165 171 atpA ATP synthase subunit alpha yes yes 2 0.0030133 75.311 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 35418000 8334800 7783200 0 0 7069300 12231000 0 0 973 193 1049 5641;5642;5643;5644;5645;5646;5647 4177;4178;4179;4180 4177 4 22131000 19908000 0 0 8527700 15349000 0 0 ELILTLANR MPTTCCTLKISPLCRELILTLANRTTTQRA ISPLCRELILTLANRTTTQRAEPMTRRLIQ R E L N R T 1 1 1 0 0 0 1 0 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1 1 1041.6182 P76241 P76241 113 121 yeaM Uncharacterized HTH-type transcriptional regulator YeaM yes yes 2 0.0020942 74.127 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 19281000 5736700 3843300 0 0 4082000 5618800 0 0 974 419 1050 5648;5649;5650;5651;5652;5653 4181;4182;4183;4184 4183 4 5736700 3934000 0 0 5188800 6663400 0 0 ELISNASDAADK LMIHSLYSNKEIFLRELISNASDAADKLRF FLRELISNASDAADKLRFRALSNPDLYEGD R E L D K L 3 0 1 2 0 0 1 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1 3 1232.5885 P0A6Z3 P0A6Z3 34 45 htpG Chaperone protein HtpG yes yes 2 2.4703E-07 121.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43015000 12543000 14100000 0 0 9743500 6628100 0 0 975 88 1051 5654;5655;5656;5657 4185;4186;4187;4188 4185 4 12543000 14433000 0 0 11754000 7342400 0 0 ELISNASDAADKLR LMIHSLYSNKEIFLRELISNASDAADKLRF RELISNASDAADKLRFRALSNPDLYEGDGE R E L L R F 3 1 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 14 1 1 3 1501.7736 P0A6Z3 P0A6Z3 34 47 htpG Chaperone protein HtpG yes yes 2;3 3.1831E-14 113.76 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 110190000 31449000 30441000 0 0 25415000 22880000 0 0 976 88 1052 5658;5659;5660;5661;5662;5663;5664;5665;5666;5667 4189;4190;4191;4192;4193;4194 4192 6 33821000 31160000 0 0 31200000 25759000 0 0 ELKARGYTFVSE VVHNGIIENHEPLREELKARGYTFVSETDT LREELKARGYTFVSETDTEVIAHLVNWELK E E L S E T 1 1 0 0 0 0 2 1 0 0 1 1 0 1 0 1 1 0 1 1 0 0 12 2 1 1 1398.7143 P17169 P17169 111 122 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 0.016467 31.597 By matching By MS/MS By MS/MS 1 1 1 25512000 0 0 0 3680000 0 0 7248900 14583000 977 288 1053 5668;5669;5670 4195 4195 1 0 0 0 27900000 0 0 55789000 83687000 ELKRVTFE QVRFLLQATVPLQSEELKRVTFEGIPPKDD TVPLQSEELKRVTFEGIPPKDDKSSRVTVS E E L F E G 0 1 0 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 2 1 0 1020.5604 P28722 P28722 99 106 yhcA Uncharacterized fimbrial chaperone YhcA yes yes 2 0.018759 37.021 By MS/MS 1 46484000 0 46484000 0 0 0 0 0 0 978 327 1054 5671 4196 4196 0 0 708880000 0 0 0 0 0 0 ELLAEIAELSDK LIATLDDSAKSAEIKELLAEIAELSDKVTF EIKELLAEIAELSDKVTFKEDNSLPVRKPS K E L D K V 2 0 0 1 0 0 3 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 12 0 3 2 1329.7028 P35340 P35340 38 49 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 6.619E-209 243.53 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1381400000 387520000 387300000 0 0 338420000 268200000 0 0 979 348 1055 5672;5673;5674;5675;5676 4197;4198;4199;4200;4201;4202 4199 6 394060000 396440000 0 0 408240000 297110000 0 0 ELLAEIAELSDKVTFK LIATLDDSAKSAEIKELLAEIAELSDKVTF LLAEIAELSDKVTFKEDNSLPVRKPSFLIT K E L F K E 2 0 0 1 0 0 3 0 0 1 3 2 0 1 0 1 1 0 0 1 0 0 16 1 3 2 1804.9822 P35340 P35340 38 53 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3 2.0518E-11 76.574 By MS/MS By MS/MS 1 1 69854000 0 0 0 0 49232000 20623000 0 0 980 348 1056 5677;5678 4203;4204 4204 0 0 0 0 0 59388000 22845000 0 0 ELLEANWYR FMAEYDSGDIVIDPKELLEANWYRYDDLPL IVIDPKELLEANWYRYDDLPLLPPPGTVAR K E L Y R Y 1 1 1 0 0 0 2 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 9 0 2 1 1192.5877 P32664 P32664 219 227 nudC NADH pyrophosphatase yes yes 2 1.1817E-60 178.08 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 68456000 17855000 16053000 0 0 17241000 17307000 0 0 981 340 1057 5679;5680;5681;5682 4205;4206;4207 4205 3 17855000 16431000 0 0 20797000 19172000 0 0 ELLEDPTR LIDGRESVGFLVTIKELLEDPTRLLLDV__ GFLVTIKELLEDPTRLLLDV__________ K E L T R L 0 1 0 1 0 0 2 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 8 0 2 1 971.49238 P0AFG6 P0AFG6 393 400 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 2 0.0026243 79.116 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 21837000 6435700 5432300 0 0 5111700 4857700 0 0 982 247 1058 5683;5684;5685;5686 4208;4209;4210 4208 3 6435700 5560500 0 0 6166300 5381200 0 0 ELLERYK IDEDTHAHLTPEAIPELLERYK________ HLTPEAIPELLERYK_______________ P E L Y K - 0 1 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 7 1 2 0 949.52328 P0AFD1 P0AFD1 160 166 nuoE NADH-quinone oxidoreductase subunit E yes yes 2 1.8821E-06 120.65 By MS/MS By MS/MS 1 1 13806000 0 0 0 0 9636900 4169000 0 0 983 244 1059 5687;5688 4211;4212 4211 2 0 0 0 0 13720000 5942800 0 0 ELLKLQKA VDRFDKLAFEPGVIPELLKLQKAGYKLVMI FEPGVIPELLKLQKAGYKLVMITNQDGLGT P E L K A G 1 0 0 0 0 1 1 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 8 2 1 0 941.59097 P06987 P06987 39 46 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 0.0076039 104.76 By MS/MS By MS/MS 2 1 45828000 0 0 0 0 28699000 17129000 0 0 984 55 1060 5689;5690;5691 4213;4214 4214 2 0 0 0 0 40859000 24417000 0 0 ELLLSDEYAEQK AKPVKTIKDKVRAMRELLLSDEYAEQKRAV AMRELLLSDEYAEQKRAVNRFMLLLSTLYS R E L Q K R 1 0 0 1 0 1 3 0 0 0 3 1 0 0 0 1 0 0 1 0 0 0 12 0 3 1 1436.7035 P0AFY8 P0AFY8 74 85 seqA Negative modulator of initiation of replication yes yes 2 1.2759E-13 147.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64664000 17410000 12227000 0 0 16087000 18940000 0 0 985 252 1061 5692;5693;5694;5695 4215;4216;4217;4218 4217 4 17410000 12516000 0 0 19406000 20982000 0 0 ELLLSDEYAEQKR AKPVKTIKDKVRAMRELLLSDEYAEQKRAV MRELLLSDEYAEQKRAVNRFMLLLSTLYSL R E L K R A 1 1 0 1 0 1 3 0 0 0 3 1 0 0 0 1 0 0 1 0 0 0 13 1 3 1 1592.8046 P0AFY8 P0AFY8 74 86 seqA Negative modulator of initiation of replication yes yes 3 0.0010059 61.423 By MS/MS By MS/MS 1 1 20782000 9268300 11513000 0 0 0 0 0 0 986 252 1062 5696;5697 4219;4220 4220 2 9268300 11785000 0 0 0 0 0 0 ELLSHMIGK QVTQHVHFVDKKRKRELLSHMIGKGNWQQV DKKRKRELLSHMIGKGNWQQVLVFTRTKHG R E L G K G 0 0 0 0 0 0 1 1 1 1 2 1 1 0 0 1 0 0 0 0 0 0 9 0 1 0 1026.5532 P25888 P25888 234 242 rhlE ATP-dependent RNA helicase RhlE yes yes 2 2.8505E-91 194.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 399180000 137660000 157290000 0 0 94512000 9715100 0 0 987 318 1063;1064 5698;5699;5700;5701;5702;5703 4221;4222;4223;4224;4225;4226;4227;4228 4222 265 8 137660000 161010000 0 0 114010000 10762000 0 0 ELLSQYDFPGDDTPIVR VDDEELLELVEMEVRELLSQYDFPGDDTPI LSQYDFPGDDTPIVRGSALKALEGDAEWEA R E L V R G 0 1 0 3 0 1 1 1 0 1 2 0 0 1 2 1 1 0 1 1 0 0 17 0 1 2 1963.9527 P0CE48;P0CE47 P0CE48 156 172 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 4.8063E-99 185.59 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 143500000 34738000 29708000 0 0 27823000 51229000 0 0 988 269 1065 5704;5705;5706;5707 4229;4230;4231;4232 4232 4 34738000 30409000 0 0 33563000 56750000 0 0 ELLTHSGP MRKESRGLHFTLDYPELLTHSGPSILSPGN HFTLDYPELLTHSGPSILSPGNHYINR___ P E L G P S 0 0 0 0 0 0 1 1 1 0 2 0 0 0 1 1 1 0 0 0 0 0 8 0 1 0 852.43413 P10902 P10902 521 528 nadB L-aspartate oxidase yes yes 2 0.0039429 101.33 By MS/MS By MS/MS 1 1 51359000 0 0 0 0 32826000 18534000 0 0 989 274 1066 5708;5709 4233;4234 4234 2 0 0 0 0 46733000 26420000 0 0 ELNEFNPQPGEFEQIDEEYKR QERAARAELLQYQLKELNEFNPQPGEFEQI PQPGEFEQIDEEYKRLANSGQLLTTSQNAL K E L K R L 0 1 2 1 0 2 6 1 0 1 1 1 0 2 2 0 0 0 1 0 0 0 21 1 6 2 2610.1874 P05824 P05824 196 216 recN DNA repair protein RecN yes yes 3 2.3582E-40 123.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 89262000 23304000 32773000 0 0 17001000 16184000 0 0 990 49 1067 5710;5711;5712;5713 4235;4236;4237;4238;4239 4235 5 23304000 33547000 0 0 20509000 17928000 0 0 ELNLDQIR KFLSDVGFTQIVLARELNLDQIRAIHQATD TQIVLARELNLDQIRAIHQATDATIEFFIH R E L I R A 0 1 1 1 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 1 0 999.53491 P76104 P76104 143 150 ydcP Uncharacterized protease YdcP yes yes 2 0.0016037 80.229 By MS/MS By MS/MS 1 2 0 0 0 0 0 0 0 0 0 991 416 1068 5714;5715;5716 4240;4241;4242 4242 3 0 0 0 0 0 0 0 0 ELNPAGR LLADLDSALPEGSVRELNPAGRRRIVILVT ALPEGSVRELNPAGRRRIVILVTKEAHCLG R E L G R R 1 1 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 7 0 1 2 755.3926 P37051 P37051 78 84 purU Formyltetrahydrofolate deformylase yes yes 2 0.0029162 86.935 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32327000 11830000 10322000 0 0 6081700 4092900 0 0 992 354 1069 5717;5718;5719;5720 4243;4244;4245 4243 3 11830000 10566000 0 0 7336400 4534000 0 0 ELNVYLR MNQTRTIRLPIHIVKELNVYLRTARELSHK RLPIHIVKELNVYLRTARELSHKLDHEPSA K E L L R T 0 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 7 0 1 0 905.49707 P13445 P13445 174 180 rpoS RNA polymerase sigma factor RpoS yes yes 2 5.2727E-17 137.5 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 69640000 22108000 21656000 0 0 14985000 10890000 0 0 993 279 1070 5721;5722;5723;5724;5725;5726;5727;5728 4246;4247;4248;4249 4249 4 64990000 68254000 0 0 19951000 12393000 0 0 ELPELTAEFIK KAAKFAINLKKVEERELPELTAEFIKRFGV VEERELPELTAEFIKRFGVEDGSVEGLRAE R E L I K R 1 0 0 0 0 0 3 0 0 1 2 1 0 1 1 0 1 0 0 0 0 0 11 0 3 2 1288.6915 P0A850 P0A850 244 254 tig Trigger factor yes yes 2 0.00016448 82.287 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34480000 7718100 8626600 0 0 8060000 10075000 0 0 994 137 1071 5729;5730;5731;5732 4250;4251;4252;4253 4253 4 7718100 8830200 0 0 9722700 11161000 0 0 ELPELTAEFIKR KAAKFAINLKKVEERELPELTAEFIKRFGV EERELPELTAEFIKRFGVEDGSVEGLRAEV R E L K R F 1 1 0 0 0 0 3 0 0 1 2 1 0 1 1 0 1 0 0 0 0 0 12 1 3 2 1444.7926 P0A850 P0A850 244 255 tig Trigger factor yes yes 3 0.00051138 60.49 By MS/MS By MS/MS 1 1 10052000 4937000 5115100 0 0 0 0 0 0 995 137 1072 5733;5734 4254;4255 4254 2 4937000 5235800 0 0 0 0 0 0 ELPYAPDR TDIQLYYQTLLIGRKELPYAPDRRMGVEMT TLLIGRKELPYAPDRRMGVEMTLLRALAFH K E L D R R 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 8 0 1 3 959.47125 P06710 P06710 338 345 dnaX DNA polymerase III subunit tau yes yes 2 0.0041535 65.038 By matching By MS/MS 1 1 13120000 0 0 0 0 5691300 7428600 0 0 996 51 1073 5735;5736 4256 4256 1 0 0 0 0 6865500 8229200 0 0 ELPYAPDRR TDIQLYYQTLLIGRKELPYAPDRRMGVEMT LLIGRKELPYAPDRRMGVEMTLLRALAFHP K E L R R M 1 2 0 1 0 0 1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 9 1 1 3 1115.5724 P06710 P06710 338 346 dnaX DNA polymerase III subunit tau yes yes 2;3 0.00083025 53.968 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 997 51 1074 5737;5738;5739 4257;4258;4259 4258 3 0 0 0 0 0 0 0 0 ELSDKVTFKEDNSLPVRKP SAKSAEIKELLAEIAELSDKVTFKEDNSLP KVTFKEDNSLPVRKPSFLITNPGSNQGPRF A E L K P S 0 1 1 2 0 0 2 0 0 0 2 3 0 1 2 2 1 0 0 2 0 0 19 4 2 1 2201.1692 P35340 P35340 45 63 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3;4;5 8.2114E-67 152.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 3 171400000 3988700 6501900 0 0 45194000 115710000 0 0 998 348 1075 5740;5741;5742;5743;5744;5745;5746;5747;5748 4260;4261;4262;4263;4264;4265;4266 4262 7 24078000 38914000 0 0 64342000 164950000 0 0 ELSFLNSGVSIR NVTEFEYEILAKRLRELSFLNSGVSIRLRD RLRELSFLNSGVSIRLRDKRDGKEDHFHYE R E L I R L 0 1 1 0 0 0 1 1 0 1 2 0 0 1 0 3 0 0 0 1 0 0 12 0 1 0 1320.7038 P0AES6 P0AES6 193 204 gyrB DNA gyrase subunit B yes yes 2 5.329E-19 129.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 78061000 18835000 17033000 0 0 21532000 20661000 0 0 999 239 1076 5749;5750;5751;5752 4267;4268;4269;4270 4268 4 18835000 17435000 0 0 25975000 22887000 0 0 ELSLEEIEEIR KFWQQMGLTRVILSRELSLEEIEEIRNQVP ILSRELSLEEIEEIRNQVPDMEIEIFVHGA R E L I R N 0 1 0 0 0 0 5 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 11 0 5 0 1358.6929 P76403 P76403 143 153 yegQ Uncharacterized protease YegQ yes yes 2 9.973E-05 103.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 25101000 5177800 10227000 0 0 4072800 5623700 0 0 1000 424 1077 5753;5754;5755;5756;5757 4271;4272;4273;4274 4274 4 5177800 10468000 0 0 4913100 6229800 0 0 ELTAPISAHQR AEIPHIKAKYTLDGKELTAPISAHQRVGEI LDGKELTAPISAHQRVGEIELYDRDKQVAH K E L Q R V 2 1 0 0 0 1 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1 3 1221.6466 P33013 P33013 337 347 dacD D-alanyl-D-alanine carboxypeptidase DacD yes yes 3 0.006129 38.402 By MS/MS 1 4779700 0 0 0 0 0 4779700 0 0 1001 341 1078 5758 4275 4275 1 0 0 0 0 0 5294900 0 0 ELTMVFESFGFK LAEMLRTRLLGKRERELTMVFESFGFKHGI RERELTMVFESFGFKHGIPIDADYVFDVRF R E L F K H 0 0 0 0 0 0 2 1 0 0 1 1 1 3 0 1 1 0 0 1 0 0 12 0 2 0 1433.6901 P0A894 P0A894 159 170 rapZ RNase adapter protein RapZ yes yes 2 0.0072061 61.78 By matching By matching By MS/MS 1 1 1 9783200 2060800 2607600 0 0 0 5114900 0 0 1002 141 1079 5759;5760;5761 4276 4276 0 2060800 2669100 0 0 0 5666200 0 0 ELTNHSLPEIGDAFGGR RSVARPRQMAMALAKELTNHSLPEIGDAFG TNHSLPEIGDAFGGRDHTTVLHACRKIEQL K E L G R D 1 1 1 1 0 0 2 3 1 1 2 0 0 1 1 1 1 0 0 0 0 0 17 0 2 2 1811.8802 P03004 P03004 416 432 dnaA Chromosomal replication initiator protein DnaA yes yes 3 3.1343E-19 107.82 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 49203000 13403000 9369800 693860 0 13482000 12255000 0 0 1003 40 1080 5762;5763;5764;5765;5766 4277;4278;4279;4280 4279 4 13403000 9591000 5895700 0 16263000 13575000 0 0 ELTSANTTR MSLLYQKFLYEFCRRELTSANTTRSYLKWD YEFCRRELTSANTTRSYLKWDASSISDQSL R E L T R S 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 3 0 0 0 0 0 9 0 1 1 991.49344 P15006 P15006 212 220 mcrC Protein McrC yes yes 2 0.0074758 52.716 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8701300 2973800 3090600 0 0 1418100 1218800 0 0 1004 280 1081 5767;5768;5769;5770 4281;4282;4283 4282 3 2973800 3163500 0 0 1710600 1350200 0 0 ELTTEIDNNIEQISSYK QNRKDAEAWFNEKSKELTTEIDNNIEQISS TTEIDNNIEQISSYKSEITELRRNVQALEI K E L Y K S 0 0 2 1 0 1 3 0 0 3 1 1 0 0 0 2 2 0 1 0 0 0 17 0 3 0 1995.9637 CON__P13645 CON__P13645 346 362 yes yes 2 7.0107E-135 253.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 216550000 26687000 16380000 0 0 95344000 78137000 0 0 + 1005 12 1082 5771;5772;5773;5774 4284;4285;4286;4287 4286 4 26687000 16767000 0 0 115010000 86558000 0 0 ELVDWFDARDP RHMSGDIDNFPRDVAELVDWFDARDPNPHV RDVAELVDWFDARDPNPHVRPVPGYGEKIP A E L D P N 1 1 0 3 0 0 1 0 0 0 1 0 0 1 1 0 0 1 0 1 0 0 11 1 1 1 1361.6252 P0ADV5 P0ADV5 141 151 yhbW Uncharacterized protein YhbW yes yes 2 0.00092166 66.435 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11308000 878130 1151600 0 0 3471600 5806700 0 0 1006 226 1083 5775;5776;5777;5778 4288 4288 1 5300800 6892300 0 0 4942500 8277500 0 0 ELVENSLDAGATR IAAGEVVERPASVVKELVENSLDAGATRID VKELVENSLDAGATRIDIDIERGGAKLIRI K E L T R I 2 1 1 1 0 0 2 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 13 0 2 2 1373.6787 P23367 P23367 29 41 mutL DNA mismatch repair protein MutL yes yes 2 4.9098E-27 139.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70268000 17619000 20291000 0 0 15687000 16671000 0 0 1007 302 1084 5779;5780;5781;5782 4289;4290;4291;4292 4291 4 17619000 20770000 0 0 18923000 18468000 0 0 ELVGEENFYTGIAHGEQER IGSPRASVESNFALRELVGEENFYTGIAHG EENFYTGIAHGEQERLQLALKVLREGGIYT R E L E R L 1 1 1 0 0 1 5 3 1 1 1 0 0 1 0 0 1 0 1 1 0 0 19 0 5 1 2177.0025 P33602 P33602 330 348 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 8.9164E-107 185.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 520730000 132800000 110900000 0 0 129670000 147350000 0 0 1008 345 1085 5783;5784;5785;5786;5787;5788;5789;5790 4293;4294;4295;4296;4297;4298;4299;4300;4301 4299 9 132800000 113520000 0 0 156430000 163230000 0 0 ELVSMCIYPDPDHRPDIVYVHQVAR DYPPLPGEHYSEKLRELVSMCIYPDPDHRP PDHRPDIVYVHQVARQMHVWTSST______ R E L A R Q 1 2 0 3 1 1 1 0 2 2 1 0 1 0 3 1 0 0 2 4 0 0 25 1 1 4 3008.4637 GST-Nek6 GST-Nek6 511 535 yes yes 5 1.2369E-05 42.806 By MS/MS By MS/MS 1 1 33510000 0 0 0 0 13458000 20052000 0 0 1009 23 1086 5791;5792 4302;4303 4303 2 0 0 0 0 16235000 22213000 0 0 ELVYTAVTR AALILPSQRTPVVTRELVYTAVTRARRRLS TPVVTRELVYTAVTRARRRLSLYADERILS R E L T R A 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 2 0 0 9 0 1 1 1050.571 P04993 P04993 564 572 recD RecBCD enzyme subunit RecD yes yes 2 0.0010768 89.698 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46312000 14230000 9901900 0 0 9835300 12345000 0 0 1010 46 1087 5793;5794;5795;5796 4304;4305;4306;4307 4307 4 14230000 10136000 0 0 11864000 13676000 0 0 ELYFATEK TNETLWNSWKQSLLRELYFATEKQLRRGMQ WKQSLLRELYFATEKQLRRGMQNTPDMRER R E L E K Q 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 8 0 2 1 999.49131 P27249 P27249 616 623 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 2.9612E-05 113.5 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 121730000 43966000 26254000 0 0 21353000 30155000 0 0 1011 320 1088 5797;5798;5799;5800 4308;4309;4310;4311 4308 4 43966000 26873000 0 0 25758000 33405000 0 0 EMDESLANLSEDEYYSEEER GRRTSRRKRAKVEYREMDESLANLSEDEYY LANLSEDEYYSEEERNAKAEKEKKLPPPPP R E M E R N 1 1 1 2 0 0 7 0 0 0 2 0 1 0 0 3 0 0 2 0 0 0 20 0 7 1 2436.9751 LSD1-FL-His LSD1-FL-His 124 143 yes yes 3 4.9013E-264 253.26 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 362490000 92903000 95044000 0 0 85628000 88912000 0 0 1012 24 1089;1090 5801;5802;5803;5804;5805;5806;5807;5808 4312;4313;4314;4315;4316;4317;4318;4319 4313 43 8 92903000 97287000 0 0 103290000 98495000 0 0 EMDESLANLSEDEYYSEEERNAK GRRTSRRKRAKVEYREMDESLANLSEDEYY LSEDEYYSEEERNAKAEKEKKLPPPPPQAP R E M A K A 2 1 2 2 0 0 7 0 0 0 2 1 1 0 0 3 0 0 2 0 0 0 23 1 7 2 2750.1501 LSD1-FL-His LSD1-FL-His 124 146 yes yes 3 3.1461E-222 231.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 4073000000 1617000000 1794800000 0 0 313210000 348070000 0 0 1013 24 1091;1092 5809;5810;5811;5812;5813;5814;5815;5816 4320;4321;4322;4323;4324;4325;4326;4327;4328 4320 43 9 1617000000 1837100000 0 0 377820000 385590000 0 0 EMDESLANLSEDEYYSEEERNAKAEK GRRTSRRKRAKVEYREMDESLANLSEDEYY DEYYSEEERNAKAEKEKKLPPPPPQAPPEE R E M E K E 3 1 2 2 0 0 8 0 0 0 2 2 1 0 0 3 0 0 2 0 0 0 26 2 8 3 3078.3248 LSD1-FL-His LSD1-FL-His 124 149 yes yes 3;4 2.3436E-96 165.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 2 1 1 1 1328700000 103950000 82931000 247540000 224770000 21830000 20954000 622520000 4162000 1014 24 1093;1094 5817;5818;5819;5820;5821;5822;5823;5824;5825;5826;5827 4329;4330;4331 4331 43 3 103950000 84888000 2103300000 1704100000 220400000 317590000 4791100000 23885000 EMGTVELLTR SEIGRTTDPVRMYMREMGTVELLTREGEID RMYMREMGTVELLTREGEIDIAKRIEDGIN R E M T R E 0 1 0 0 0 0 2 1 0 0 2 0 1 0 0 0 2 0 0 1 0 0 10 0 2 0 1147.5907 P00579 P00579 104 113 rpoD RNA polymerase sigma factor RpoD yes yes 2 1.1883E-37 156.62 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 636540000 213660000 184040000 0 0 109800000 129050000 0 0 1015 27 1095;1096 5828;5829;5830;5831;5832;5833;5834;5835 4332;4333;4334;4335;4336;4337;4338;4339;4340 4340 52 9 213660000 188390000 0 0 132450000 142960000 0 0 EMGYGQEYR DVPVHLRNAPTKLMKEMGYGQEYRYAHDEA PTKLMKEMGYGQEYRYAHDEANAYAAGEVY K E M Y R Y 0 1 0 0 0 1 2 2 0 0 0 0 1 0 0 0 0 0 2 0 0 0 9 0 2 0 1131.4655 P0AAZ4 P0AAZ4 382 390 rarA Replication-associated recombination protein A yes yes 2 0.0018265 83.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17632000 4576400 4983800 0 0 4104800 3966600 0 0 1016 189 1097 5836;5837;5838;5839 4341;4342;4343;4344 4341 4 4576400 5101400 0 0 4951600 4394100 0 0 EMHGVPVIYLSQLNER IIAEAKDEATDGEIREMHGVPVIYLSQLNE MHGVPVIYLSQLNERLSALAGRFYHEPSDN R E M E R L 0 1 1 0 0 1 2 1 1 1 2 0 1 0 1 1 0 0 1 2 0 0 16 0 2 1 1883.9564 P22188 P22188 78 93 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase yes yes 3 3.267E-05 67.326 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16098000 3633700 3840600 0 0 4763900 3859700 0 0 1017 299 1098 5840;5841;5842;5843 4345;4346;4347;4348 4347 4 3633700 3931300 0 0 5746800 4275700 0 0 EMLIADGIDPNELLNSLAAVK AAEVEERTRKLQQYREMLIADGIDPNELLN GIDPNELLNSLAAVKSGTKAKRAQRPAKYS R E M V K S 3 0 2 2 0 0 2 1 0 2 4 1 1 0 1 1 0 0 0 1 0 0 21 0 2 4 2225.1613 P0ACF8 P0ACF8 63 83 hns DNA-binding protein H-NS yes yes 2;3 1.5196E-196 218.28 By MS/MS By matching By MS/MS By MS/MS 2 1 3 2 706600000 97500000 66123000 0 0 291540000 251440000 0 0 1018 210 1099;1100 5844;5845;5846;5847;5848;5849;5850;5851 4349;4350;4351;4352;4353 4349 185 4 97500000 67683000 0 0 351680000 278540000 0 0 EMLPVLEAVAK SPFILLADKKISNIREMLPVLEAVAKAGKP SNIREMLPVLEAVAKAGKPLLIIAEDVEGE R E M A K A 2 0 0 0 0 0 2 0 0 0 2 1 1 0 1 0 0 0 0 2 0 0 11 0 2 3 1198.6631 P0A6F5 P0A6F5 232 242 groL 60 kDa chaperonin yes yes 2 0.00010098 109.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1904200000 494790000 405710000 0 0 465280000 538370000 0 0 1019 68 1101;1102 5852;5853;5854;5855;5856;5857;5858;5859 4354;4355;4356;4357;4358;4359;4360;4361 4359 80 8 494790000 415280000 0 0 561270000 596400000 0 0 EMQDAFAAR GLTAEMLARMHGISREMQDAFAARSHARAW MHGISREMQDAFAARSHARAWAATQSAAFK R E M A R S 3 1 0 1 0 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 9 0 1 3 1037.46 P21151 P21151 163 171 fadA 3-ketoacyl-CoA thiolase yes yes 2 0.0030194 47.082 By MS/MS 1 0 0 0 0 0 0 0 0 0 1020 292 1103 5860 4362 4362 1 0 0 0 0 0 0 0 0 EMTHAGELEHLTPER HLGFRIADETLALMREMTHAGELEHLTPER EMTHAGELEHLTPERVWKETESALTTRNPQ R E M E R V 1 1 0 0 0 0 4 1 2 0 2 0 1 0 1 0 2 0 0 0 0 0 15 0 4 2 1748.8152 P06961 P06961 162 176 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 3 0.0020635 41.967 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 23612000 6510900 5969300 0 0 4879700 6251700 0 0 1021 54 1104 5861;5862;5863;5864 4363;4364 4363 2 6510900 6110100 0 0 5886400 6925500 0 0 EMVEANLR RRMSIGEAKARRAKKEMVEANLRLVISIAK KARRAKKEMVEANLRLVISIAKKYTNRGLQ K E M L R L 1 1 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 8 0 2 1 960.46987 P00579 P00579 378 385 rpoD RNA polymerase sigma factor RpoD yes yes 2 1.2821E-11 104.45 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 232310000 63570000 86112000 0 0 40070000 42558000 0 0 1022 27 1105;1106 5865;5866;5867;5868;5869;5870;5871;5872 4365;4366;4367;4368;4369;4370;4371 4370 53 4 63570000 88145000 0 0 48336000 47145000 0 0 EMVMDFFR AWEAGILTRRYGLDKEMVMDFFRENNSCST RRYGLDKEMVMDFFRENNSCSTLRFFMAGY K E M F R E 0 1 0 1 0 0 1 0 0 0 0 0 2 2 0 0 0 0 0 1 0 0 8 0 1 0 1073.4674 P64574 P64574 69 76 yghW Uncharacterized protein YghW yes yes 2 3.5876E-58 173.88 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 3 2 2 1 1 1 110260000 34035000 38047000 0 0 18794000 18487000 306740 595290 1023 396 1107;1108 5873;5874;5875;5876;5877;5878;5879;5880;5881;5882 4372;4373;4374;4375;4376;4377;4378 4376 312 7 37908000 38945000 0 0 22671000 20480000 2360800 3416300 ENCIFLDNPHQAR ALGSTSNDFNTPGVKENCIFLDNPHQARRF VKENCIFLDNPHQARRFHQEMLNLFLKYSA K E N A R R 1 1 2 1 1 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 13 0 1 2 1612.7416 P00393 P00393 136 148 ndh NADH dehydrogenase yes yes 3 0.0023253 47.189 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 19987000 4396700 6380800 0 0 4205900 5003300 0 0 1024 25 1109 5883;5884;5885;5886 4379;4380;4381 4379 2 4396700 6531400 0 0 5073600 5542500 0 0 ENEATCFGR LPAIKHGNILEIAQRENEATCFGRRTPDDS LEIAQRENEATCFGRRTPDDSFLEWHKPAS R E N G R R 1 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 9 0 2 1 1082.4451 P77398 P77398 192 200 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 4.4765E-112 198.92 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 4198600000 862890000 1132100000 0 0 1088200000 1115300000 0 0 1025 432 1110 5887;5888;5889;5890;5891 4382;4383;4384;4385 4382 2 862890000 1158800000 0 0 1312700000 1235500000 0 0 ENELEEAVMSDR QLVAEEMGHKVILRRENELEEAVMSDRDTG LRRENELEEAVMSDRDTGAAAEPRAPVVTI R E N D R D 1 1 1 1 0 0 4 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 12 0 4 1 1420.614 P0A705;P0A705-3;P0A705-2 P0A705 370 381 infB Translation initiation factor IF-2 yes no 2 3.1381E-20 108.43 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45527000 0 15646000 0 0 16944000 12937000 0 0 1026 90 1111 5892;5893;5894;5895 4386;4387;4388;4389;4390 4387 4 0 16015000 0 0 20440000 14331000 0 0 ENEPFDVALR ______________________________ VIKVRENEPFDVALRRFKRSCEKAGVLAEV R E N L R R 1 1 1 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 10 0 2 2 1188.5775 P68679 P68679 8 17 rpsU 30S ribosomal protein S21 yes yes 2 1.7572E-20 137.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 129820000 25405000 28414000 0 0 38971000 37030000 0 0 1027 402 1112 5896;5897;5898;5899 4391;4392;4393;4394 4391 4 25405000 29085000 0 0 47011000 41021000 0 0 ENEPFDVALRR ______________________________ IKVRENEPFDVALRRFKRSCEKAGVLAEVR R E N R R F 1 2 1 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 11 1 2 2 1344.6786 P68679 P68679 8 18 rpsU 30S ribosomal protein S21 yes yes 3 0.00040286 50.484 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38585000 11665000 8875100 0 0 7436300 10609000 0 0 1028 402 1113 5900;5901;5902;5903 4395;4396;4397;4398 4395 4 11665000 9084600 0 0 8970400 11753000 0 0 ENEQQYIR PEEVKAAFDDAIAARENEQQYIREAEAYTN DDAIAARENEQQYIREAEAYTNEVQPRANG R E N I R E 0 1 1 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 8 0 2 0 1078.5043 P0ABC7 P0ABC7 259 266 hflK Modulator of FtsH protease HflK yes yes 2 0.00133 83.801 By MS/MS By MS/MS 2 1 5712600 3327700 0 0 0 2384900 0 0 0 1029 197 1114 5904;5905;5906 4399;4400 4399 2 3327700 0 0 0 2876900 0 0 0 ENPSPFVEILK ALTRARHRVWALFNKENPSPFVEILKNLDV LFNKENPSPFVEILKNLDVPVARKP_____ K E N L K N 0 0 1 0 0 0 2 0 0 1 1 1 0 1 2 1 0 0 0 1 0 0 11 0 2 2 1271.6762 P15038 P15038 664 674 helD Helicase IV yes yes 2 0.00017141 81.525 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 123520000 32002000 31168000 0 0 22946000 37404000 0 0 1030 281 1115 5907;5908;5909;5910 4401;4402;4403;4404 4401 4 32002000 31904000 0 0 27679000 41435000 0 0 ENSKKTVDME PITPTLNREQLSTSEENSKKTVDMESTEVF LSTSEENSKKTVDMESTEVFTKKTKLTEEE E E N M E S 0 0 1 1 0 0 2 0 0 0 0 2 1 0 0 1 1 0 0 1 0 0 10 2 1 0 1179.5442 CON__P02663 CON__P02663 133 142 yes yes 2 0.001837 53.968 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 + 1031 7 1116 5911;5912;5913;5914 4405;4406;4407;4408;4409 4405 1;35 0 0 0 0 0 0 0 0 0 EPPLTHYGVSK MIARSMERLGRKSAKEPPLTHYGVSKLNFD KSAKEPPLTHYGVSKLNFDFTLDITRAQEE K E P S K L 0 0 0 0 0 0 1 1 1 0 1 1 0 0 2 1 1 0 1 1 0 0 11 0 1 2 1226.6295 P75821 P75821 284 294 ybjS Uncharacterized protein YbjS yes yes 3 0.0029749 46.592 By MS/MS By MS/MS By matching By matching By matching 2 2 1 2 1 21038000 7853200 5637000 939860 0 0 4487800 0 2120200 1032 408 1117 5915;5916;5917;5918;5919;5920;5921;5922 4410;4411 4410 2 9663300 7519200 7985900 0 0 5111200 0 12167000 EPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR EVGPGAVGERTPRKKEPPRASPPGGLAEPP ATPMETGIAETPEGRRTSRRKRAKVEYREM K E P G R R 6 2 0 0 0 1 5 8 0 1 1 0 1 0 11 3 4 0 0 2 0 0 45 1 5 17 4274.0914 LSD1-FL-His LSD1-FL-His 66 110 yes yes 4 7.759E-12 48.025 By MS/MS By MS/MS By matching 1 1 1 49125000 23563000 19196000 0 0 0 6365900 0 0 1033 24 1118 5923;5924;5925 4412;4413 4413 2 23563000 19649000 0 0 0 7052000 0 0 EPTPEELAER KLNRISRQMLQEMGREPTPEELAERMLMPE QEMGREPTPEELAERMLMPEDKIRKVLKIA R E P E R M 1 1 0 0 0 0 4 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 10 0 4 3 1169.5564 P00579 P00579 477 486 rpoD RNA polymerase sigma factor RpoD yes yes 2 5.1298E-77 189.13 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 329060000 72262000 51901000 0 0 101500000 103400000 0 0 1034 27 1119 5926;5927;5928;5929 4414;4415;4416;4417;4418 4416 5 72262000 53126000 0 0 122440000 114540000 0 0 EPTPIQQQAIPAVLEGR LSPDILRAVAEQGYREPTPIQQQAIPAVLE TPIQQQAIPAVLEGRDLMASAQTGTGKTAG R E P G R D 2 1 0 0 0 3 2 1 0 2 1 0 0 0 3 0 1 0 0 1 0 0 17 0 2 5 1845.9949 P25888 P25888 23 39 rhlE ATP-dependent RNA helicase RhlE yes yes 2 0 279.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 176630000 35213000 29569000 0 0 50104000 61747000 0 0 1035 318 1120 5930;5931;5932;5933 4419;4420;4421;4422 4422 4 35213000 30267000 0 0 60441000 68402000 0 0 EQAAAQESANLSSK LERTRQLEKELQQLKEQAAAQESANLSSKA KEQAAAQESANLSSKAIDVNGVKLLVSELS K E Q S K A 4 0 1 0 0 2 2 0 0 0 1 1 0 0 0 3 0 0 0 0 0 0 14 0 2 4 1432.6794 P00957 P00957 751 764 alaS Alanine--tRNA ligase yes yes 2 1.1058E-39 150.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29380000 9670400 8694100 0 0 5537000 5478200 0 0 1036 33 1121 5934;5935;5936;5937 4423;4424;4425;4426 4423 4 9670400 8899300 0 0 6679300 6068600 0 0 EQDFLGIEVHSP FGMGASLVAMAKDRPEQDFLGIEVHSPGVG DRPEQDFLGIEVHSPGVGACLASAHEEGLS P E Q S P G 0 0 0 1 0 1 2 1 1 1 1 0 0 1 1 1 0 0 0 1 0 0 12 0 2 0 1369.6514 P0A8I5 P0A8I5 87 98 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 2.4941E-19 120.87 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 125600000 14024000 14827000 0 0 32417000 64329000 0 0 1037 144 1122 5938;5939;5940;5941 4427;4428;4429 4429 2 84655000 88742000 0 0 46152000 91701000 0 0 EQDSLQLTELHPSDYPLLR RYYPGSPLIARLLLREQDSLQLTELHPSDY LQLTELHPSDYPLLRSEFQKDSRARVEKAD R E Q L R S 0 1 0 2 0 2 2 0 1 0 5 0 0 0 2 2 1 0 1 0 0 0 19 0 2 2 2253.1277 P37634 P37634 110 128 rlmJ Ribosomal RNA large subunit methyltransferase J yes yes 3 0.0001257 50.787 By MS/MS By MS/MS By MS/MS 1 1 1 15296000 4950600 4396000 0 0 0 5949400 0 0 1038 358 1123 5942;5943;5944 4430;4431;4432 4432 3 4950600 4499800 0 0 0 6590600 0 0 EQEAAELKR QDDMTKNAQAEKARREQEAAELKRKAEEEA AEKARREQEAAELKRKAEEEARRKLEEEAR R E Q K R K 2 1 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 9 1 3 2 1072.5513 P0A705;P0A705-3;P0A705-2 P0A705 177 185 infB Translation initiation factor IF-2 yes no 3 0.012729 26.673 By MS/MS By MS/MS 1 1 7474200 2782500 4691700 0 0 0 0 0 0 1039 90 1124 5945;5946 4433 4433 1 2782500 4802400 0 0 0 0 0 0 EQFAKGVQLHNEKDLTKP TYLVTLESPVADDTAEQFAKGVQLHNEKDL AKGVQLHNEKDLTKPAVLEVITPTQVRLTI A E Q K P A 1 0 1 1 0 2 2 1 1 0 2 3 0 1 1 0 1 0 0 1 0 0 18 3 2 1 2081.0906 P0AA43 P0AA43 146 163 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3;4 1.0663E-06 67.605 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 170470000 17778000 12486000 0 0 125230000 14982000 0 0 1040 183 1125 5947;5948;5949;5950;5951;5952;5953 4434;4435 4435 2 107320000 74731000 0 0 178290000 21356000 0 0 EQIDHYCEK HDEKLVLLSAEFATREQIDHYCEKAGLHPQ AEFATREQIDHYCEKAGLHPQVVIEANSIS R E Q E K A 0 0 0 1 1 1 2 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 2 0 1220.5132 P27111 P27111 202 210 cynR HTH-type transcriptional regulator CynR yes yes 2 0.0049454 57.96 By matching By MS/MS By matching 1 1 1 3668200 1470200 1816600 0 0 0 381360 0 0 1041 319 1126 5954;5955;5956 4436 4436 1 1470200 1859500 0 0 0 422460 0 0 EQIIFPEIDYDKVDR AKSFDGRGNYSMGVREQIIFPEIDYDKVDR EQIIFPEIDYDKVDRVRGLDITITTTAKSD R E Q D R V 0 1 0 3 0 1 2 0 0 3 0 1 0 1 1 0 0 0 1 1 0 0 15 1 2 1 1878.9363 P62399 P62399 134 148 rplE 50S ribosomal protein L5 yes yes 2;3 2.499E-23 153.63 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 262320000 57999000 77483000 0 0 63986000 62852000 0 0 1042 388 1127 5957;5958;5959;5960;5961;5962;5963;5964;5965;5966 4437;4438;4439;4440;4441;4442;4443;4444;4445 4440 8 57999000 79312000 0 0 77187000 81325000 0 0 EQLGLSQQAVAER QNEALTTGARLRNAREQLGLSQQAVAERLC AREQLGLSQQAVAERLCLKVSTVRDIEEDK R E Q E R L 2 1 0 0 0 3 2 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 2 2 1427.7369 P27434 P27434 24 36 rodZ Cytoskeleton protein RodZ yes yes 2 0.019617 50.149 By matching By MS/MS By matching 1 1 1 19425000 6839600 0 0 0 6547600 6037800 0 0 1043 324 1128 5967;5968;5969 4446 4446 1 6839600 0 0 0 7898400 6688500 0 0 EQLQQIRAE CVQLSQIQAQISALEEQLQQIRAETECQNT QISALEEQLQQIRAETECQNTEYQQLLDIK E E Q A E T 1 1 0 0 0 3 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 1 1 1 1113.5778 CON__P13645;CON__P02535-1 CON__P13645 416 424 yes no 2 8.1087E-05 78.334 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 3566700 0 0 0 0 0 0 1513800 2052800 + 1044 12 1129 5970;5971;5972;5973 4447;4448;4449 4448 2 0 0 0 0 0 0 11651000 11781000 EQMLELLQQR QDYIVKKGVDVHALKEQMLELLQQRGAQYP VHALKEQMLELLQQRGAQYPAEHNVGHLYK K E Q Q R G 0 1 0 0 0 3 2 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 10 0 2 0 1286.6653 P06149 P06149 512 521 dld D-lactate dehydrogenase yes yes 2 0.015117 48.423 By MS/MS By matching 1 1 6041400 0 2942500 0 0 3098900 0 0 0 1045 50 1130 5974;5975 4450 4450 0 0 3011900 0 0 3738300 0 0 0 EQNLILRHHGGAA SVSPQTIRRDLNELAEQNLILRHHGGAALP LAEQNLILRHHGGAALPSSSVNTPWHDRKA A E Q A A L 2 1 1 0 0 1 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 13 1 1 1 1414.7429 P0ACL0 P0ACL0 45 57 glpR Glycerol-3-phosphate regulon repressor yes yes 2;3 4.265E-07 81.338 By MS/MS By MS/MS By MS/MS 2 2 2 65085000 11470000 9855400 0 0 0 43760000 0 0 1046 215 1131 5976;5977;5978;5979;5980;5981 4451;4452;4453;4454 4453 2 69237000 58984000 0 0 0 62380000 0 0 EQNLILRHHGGAALP SVSPQTIRRDLNELAEQNLILRHHGGAALP EQNLILRHHGGAALPSSSVNTPWHDRKATQ A E Q L P S 2 1 1 0 0 1 1 2 2 1 3 0 0 0 1 0 0 0 0 0 0 0 15 1 1 2 1624.8798 P0ACL0 P0ACL0 45 59 glpR Glycerol-3-phosphate regulon repressor yes yes 3 0.017764 26.729 By MS/MS By MS/MS By MS/MS 1 1 1 11692000 657630 0 0 0 6183800 4850800 0 0 1047 215 1132 5982;5983;5984 4455 4455 1 3969800 0 0 0 8803700 6914800 0 0 EQTSGVQQQIR DLIATRTGENKWLTREQTSGVQQQIRQALS WLTREQTSGVQQQIRQALSALPLPVNRLEE R E Q I R Q 0 1 0 0 0 4 1 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 11 0 1 0 1272.6422 P15038 P15038 123 133 helD Helicase IV yes yes 2 4.077E-65 179.68 By matching By MS/MS By matching By MS/MS 1 1 1 1 120860000 31219000 40967000 0 0 21838000 26834000 0 0 1048 281 1133 5985;5986;5987;5988 4456;4457 4457 2 31219000 41934000 0 0 26343000 29726000 0 0 EQVEMIEER IALTEQGAQWLEENREQVEMIEERIKARCV WLEENREQVEMIEERIKARCVGAALRQNPQ R E Q E R I 0 1 0 0 0 1 4 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 9 0 4 0 1161.5336 P64588 P64588 140 148 yqjI Transcriptional regulator YqjI yes yes 2 1.7712E-09 122.13 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 125000000 31072000 30860000 0 0 29490000 33578000 0 0 1049 398 1134;1135 5989;5990;5991;5992;5993;5994;5995;5996;5997 4458;4459;4460;4461;4462;4463;4464 4464 315 7 31072000 31588000 0 0 35574000 37197000 0 0 EQVIPFR FNLPQFYQIVKVDGREQVIPFRTKSIGNMP QIVKVDGREQVIPFRTKSIGNMPPANQDHD R E Q F R T 0 1 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 7 0 1 1 887.4865 P00936 P00936 818 824 cyaA Adenylate cyclase yes yes 2 0.011835 53.554 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 34393000 9431400 8182400 0 0 1117500 15662000 0 0 1050 31 1136 5998;5999;6000;6001;6002;6003;6004 4465 4465 1 16265000 15914000 0 0 1591000 19537000 0 0 ERAEISMLEGAVLDIR RYIADKHNMLGGCPKERAEISMLEGAVLDI RAEISMLEGAVLDIRYGVSRIAYSKDFETL K E R I R Y 2 2 0 1 0 0 3 1 0 2 2 0 1 0 0 1 0 0 0 1 0 0 16 1 3 2 1800.9404 GST-Nek6 GST-Nek6 88 103 yes yes 3 4.6209E-07 72.819 By MS/MS By MS/MS 3 2 51864000 0 0 0 0 23825000 28039000 0 0 1051 23 1137;1138 6005;6006;6007;6008;6009 4466;4467;4468;4469 4469 31 4 0 0 0 0 49141000 31061000 0 0 ERDLLER KAKLLSHRPVRDIDRERDLLERLITLGKAH RPVRDIDRERDLLERLITLGKAHHLDAHYI R E R E R L 0 2 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 1 2 0 929.49304 P0A9J8 P0A9J8 52 58 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.009716 69.812 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 13323000 3980300 4482300 0 0 2039600 2349000 472220 0 1052 166 1139 6010;6011;6012;6013;6014 4470;4471 4471 2 3980300 4588100 0 0 2460300 2602100 3634300 0 ERLHTEDITAR AFGRKAAEEMDERIRERLHTEDITARTFHA ERIRERLHTEDITARTFHALALHIIQQGSK R E R A R T 1 2 0 1 0 0 2 0 1 1 1 0 0 0 0 0 2 0 0 0 0 0 11 1 2 1 1339.6844 P15038 P15038 263 273 helD Helicase IV yes yes 3 0.021315 27.137 By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 20671000 6524300 8966200 0 1212300 0 0 1636400 2331800 1053 281 1140 6015;6016;6017;6018;6019;6020 4472 4472 1 6524300 11358000 0 9191200 0 0 12594000 13382000 ERPDYDVPVHLR NAVYTAFKAALADARERPDYDVPVHLRNAP DARERPDYDVPVHLRNAPTKLMKEMGYGQE R E R L R N 0 2 0 2 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 2 0 0 12 1 1 2 1494.7579 P0AAZ4 P0AAZ4 362 373 rarA Replication-associated recombination protein A yes yes 3 1.0619E-19 132.32 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55488000 17069000 12447000 0 0 9870100 16102000 0 0 1054 189 1141 6021;6022;6023;6024 4473;4474;4475;4476 4473 4 17069000 12741000 0 0 11906000 17837000 0 0 ERSPSFGEYYSHPR GFESYQERVEGNKVRERSPSFGEYYSHPRL RERSPSFGEYYSHPRLFWLSQTPFEQRHIV R E R P R L 0 2 0 0 0 0 2 1 1 0 0 0 0 1 2 3 0 0 2 0 0 0 14 1 2 2 1710.775 P21179 P21179 496 509 katE Catalase HPII yes yes 3;4 2.1114E-09 73.156 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 115340000 34135000 41964000 0 0 19155000 20083000 0 0 1055 293 1142 6025;6026;6027;6028;6029;6030;6031;6032 4477;4478;4479;4480;4481;4482;4483 4482 6 34135000 42955000 0 0 23107000 22248000 0 0 ERVPVSIYLVNGIK KGQSLQDPFLNALRRERVPVSIYLVNGIKL RERVPVSIYLVNGIKLQGQIESFDQFVILL R E R I K L 0 1 1 0 0 0 1 1 0 2 1 1 0 0 1 1 0 0 1 3 0 0 14 1 1 1 1585.9192 P0A6X3 P0A6X3 18 31 hfq RNA-binding protein Hfq yes yes 2;3 1.8627E-12 76.143 By MS/MS By MS/MS By MS/MS 1 1 1 11991000 0 0 0 0 0 11991000 0 0 1056 84 1143 6033;6034;6035 4484;4485;4486 4485 3 0 0 0 0 0 13284000 0 0 ESAPAAAAPAAQPALAAR TREDVEKHLAKAPAKESAPAAAAPAAQPAL PAAAAPAAQPALAARSEKRVPMTRLRKRVA K E S A R S 10 1 0 0 0 1 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 18 0 1 13 1632.8584 P0AFG6 P0AFG6 157 174 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 2 9.1059E-31 124.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42249000 10375000 8751800 0 0 10385000 12738000 0 0 1057 247 1144 6036;6037;6038;6039 4487;4488;4489;4490 4489 4 10375000 8958400 0 0 12527000 14111000 0 0 ESDELIAK QYIIIGHSERRTYHKESDELIAKKFAVLKE ERRTYHKESDELIAKKFAVLKEQGLTPVLC K E S A K K 1 0 0 1 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 0 2 1 903.45493 P0A858 P0A858 104 111 tpiA Triosephosphate isomerase yes yes 2 0.0003792 104.21 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 93063000 23261000 22536000 0 0 24393000 22874000 0 0 1058 139 1145 6040;6041;6042;6043 4491;4492;4493;4494 4493 4 23261000 23068000 0 0 29425000 25339000 0 0 ESDGTVINNEGRAQRFFQVYDP IMENAHLVLSAASFAESDGTVINNEGRAQR NNEGRAQRFFQVYDPAYYDSKTVMLESWRW A E S D P A 1 2 2 2 0 2 2 2 0 1 0 0 0 2 1 1 1 0 1 2 0 0 22 2 2 1 2541.1884 P33602 P33602 615 636 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 0.016325 42.309 By MS/MS By MS/MS By MS/MS 1 1 1 13093000 0 0 0 0 4338800 5183600 3570300 0 1059 345 1146 6044;6045;6046 4495 4495 1 0 0 0 0 6177100 7389200 27478000 0 ESDLALMTNAGTEIGVASTK GSLAICNVPGSSLVRESDLALMTNAGTEIG LMTNAGTEIGVASTKAFTTQLTVLLMLVAK R E S T K A 3 0 1 1 0 0 2 2 0 1 2 1 1 0 0 2 3 0 0 1 0 0 20 0 2 3 2006.983 P17169 P17169 385 404 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 0 308.84 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 4 3 1868600000 298550000 372220000 0 0 580910000 616920000 0 0 1060 288 1147;1148 6047;6048;6049;6050;6051;6052;6053;6054;6055;6056;6057;6058;6059;6060 4496;4497;4498;4499;4500;4501;4502;4503;4504;4505;4506;4507;4508;4509;4510;4511 4504 243 16 315640000 381010000 0 0 757500000 683410000 0 0 ESESMTRRSVNMEP DRDDENWLCHSLYLPESESMTRRSVNMEPK PESESMTRRSVNMEPKLRPAFPPKIRTY__ P E S E P K 0 2 1 0 0 0 3 0 0 0 0 0 2 0 1 3 1 0 0 1 0 0 14 2 3 0 1651.7294 P0AC41 P0AC41 562 575 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 0.011786 30.059 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 12365000 824960 1117500 0 0 7071500 3350900 0 0 1061 203 1149 6061;6062;6063;6064 4512 4512 1 4979900 6688000 0 0 10068000 4776600 0 0 ESFVEAE TVREGRSQDLASQAEESFVEAE________ QDLASQAEESFVEAE_______________ E E S A E - 1 0 0 0 0 0 3 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 7 0 2 1 809.34431 P0A7V0 P0A7V0 235 241 rpsB 30S ribosomal protein S2 yes yes 1 2.1533E-18 134.12 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 145940000 19189000 15898000 19636000 22888000 11057000 14247000 19465000 23559000 1062 128 1150 6065;6066;6067;6068;6069;6070;6071;6072 4513;4514;4515;4516 4515 3 294840000 242450000 166840000 173530000 170240000 215930000 149810000 135200000 ESGLFDMR FANGAVRSALWLSGKESGLFDMRDVLDLNN ALWLSGKESGLFDMRDVLDLNNL_______ K E S M R D 0 1 0 1 0 0 1 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 8 0 1 0 953.42767 P04036 P04036 258 265 dapB 4-hydroxy-tetrahydrodipicolinate reductase yes yes 2 0.013656 50.607 By matching By matching By MS/MS By MS/MS 1 1 1 1 11997000 3289200 2854200 0 0 2578400 3275200 0 0 1063 43 1151 6073;6074;6075;6076 4517;4518 4517 2 3289200 2921500 0 0 3110300 3628200 0 0 ESHLNGEAEVEK EPYYSTAVGLLHYGKESHLNGEAEVEKRVT YGKESHLNGEAEVEKRVTASVGSWIKRLNS K E S E K R 1 0 1 0 0 0 4 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 12 0 4 1 1340.6208 P0ABH0 P0ABH0 388 399 ftsA Cell division protein FtsA yes yes 2;3 4.7796E-84 181.68 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 77559000 22826000 21625000 0 0 17380000 15728000 0 0 1064 199 1152 6077;6078;6079;6080;6081;6082;6083;6084 4519;4520;4521;4522;4523;4524 4520 6 22826000 22135000 0 0 20965000 17423000 0 0 ESHLNGEAEVEKR EPYYSTAVGLLHYGKESHLNGEAEVEKRVT GKESHLNGEAEVEKRVTASVGSWIKRLNSW K E S K R V 1 1 1 0 0 0 4 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 13 1 4 1 1496.7219 P0ABH0 P0ABH0 388 400 ftsA Cell division protein FtsA yes yes 2;3;4 2.9438E-58 169.04 By MS/MS By MS/MS By MS/MS By matching 3 3 1 1 89457000 26776000 56955000 0 0 4393100 1332900 0 0 1065 199 1153 6085;6086;6087;6088;6089;6090;6091;6092 4525;4526;4527;4528;4529;4530;4531 4528 4 26776000 58299000 0 0 5299400 1476500 0 0 ESTAYHEAGHAIIGR MGAERRSMVMTEAQKESTAYHEAGHAIIGR ESTAYHEAGHAIIGRLVPEHDPVHKVTIIP K E S G R L 3 1 0 0 0 0 2 2 2 2 0 0 0 0 0 1 1 0 1 0 0 0 15 0 2 3 1610.7801 P0AAI3 P0AAI3 409 423 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 3;4 7.4609E-07 75.462 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 58182000 13153000 17866000 0 0 12488000 14676000 0 0 1066 185 1154 6093;6094;6095;6096;6097;6098;6099;6100 4532;4533;4534;4535;4536;4537;4538;4539 4535 8 13153000 18287000 0 0 15064000 16257000 0 0 ESVTIHR GEPTRVEIGDRNRIRESVTIHRGTVQGGGL IGDRNRIRESVTIHRGTVQGGGLTKVGSDN R E S H R G 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 7 0 1 0 840.44537 P0A722 P0A722 94 100 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2 0.0043208 66.087 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22803000 7378900 6652300 0 0 4669600 4102500 0 0 1067 92 1155 6101;6102;6103;6104 4540;4541;4542;4543 4541 4 7378900 6809300 0 0 5633000 4544600 0 0 ESYPKPK VEGVDFFNELERAIRESYPKPKMMILGFPS NELERAIRESYPKPKMMILGFPSNPTAQCV R E S P K M 0 0 0 0 0 0 1 0 0 0 0 2 0 0 2 1 0 0 1 0 0 0 7 1 1 2 847.44397 P77434 P77434 167 173 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 0.011442 65.672 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38570000 13906000 12002000 0 0 7627300 5034600 0 0 1068 433 1156 6105;6106;6107;6108 4544;4545;4546 4546 2 13906000 12285000 0 0 9200800 5577200 0 0 ETCHEVLK HRVYKNYDPRATVMRETCHEVLKELGTKDD PRATVMRETCHEVLKELGTKDDLLEVAMEL R E T L K E 0 0 0 0 1 0 2 0 1 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 2 0 1014.4804 P0ABH7 P0ABH7 321 328 gltA Citrate synthase yes yes 2 0.0064933 58.917 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 11288000 3482700 3700800 0 0 2321200 1783400 0 0 1069 200 1157 6109;6110;6111;6112 4547;4548 4547 2 3482700 3788200 0 0 2800100 1975600 0 0 ETDADEIMVNGQIFDHQAR GDKAKVRHGLQSILRETDADEIMVNGQIFD DEIMVNGQIFDHQARLHSFELAMDVKEELL R E T A R L 2 1 1 3 0 2 2 1 1 2 0 0 1 1 0 0 1 0 0 1 0 0 19 0 2 2 2187.9855 P0ADV5 P0ADV5 301 319 yhbW Uncharacterized protein YhbW yes yes 2;3 1.2442E-196 212.59 By MS/MS By MS/MS By MS/MS 1 2 1 0 0 0 0 0 0 0 0 0 1070 226 1158;1159 6113;6114;6115;6116 4549;4550;4551;4552 4549 202 4 0 0 0 0 0 0 0 0 ETESALTTR HAGELEHLTPERVWKETESALTTRNPQVFF PERVWKETESALTTRNPQVFFQVLRDCGAL K E T T R N 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 3 0 0 0 0 0 9 0 2 1 1006.4931 P06961 P06961 180 188 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 2 0.0047463 47.603 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9657300 4345300 0 0 0 2554100 2757900 0 0 1071 54 1160 6117;6118;6119;6120 4553;4554 4554 2 4345300 0 0 0 3081000 3055200 0 0 ETFADIGQTLAK LVYGPKVKPGSLGHRETFADIGQTLAKYFG GHRETFADIGQTLAKYFGTSDMEYGKAMF_ R E T A K Y 2 0 0 1 0 1 1 1 0 1 1 1 0 1 0 0 2 0 0 0 0 0 12 0 1 2 1292.6612 P0A6K6 P0A6K6 382 393 deoB Phosphopentomutase yes yes 2 2.2842E-13 119.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 157420000 45546000 30829000 0 0 40846000 40200000 0 0 1072 75 1161 6121;6122;6123;6124 4555;4556;4557;4558 4557 4 45546000 31557000 0 0 49273000 44532000 0 0 ETGAIVVVTGEMDYVTDGHR DAAANAIPAAQTLARETGAIVVVTGEMDYV VVVTGEMDYVTDGHRIIGIHGGDPLMTKVV R E T H R I 1 1 0 2 0 0 2 3 1 1 0 0 1 0 0 0 3 0 1 4 0 0 20 0 2 1 2148.0157 P76423 P76423 163 182 thiM Hydroxyethylthiazole kinase yes yes 2;3 4.6469E-107 231.26 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 466240000 80028000 71894000 0 0 150160000 164150000 0 0 1073 426 1162;1163 6125;6126;6127;6128;6129;6130;6131;6132;6133;6134;6135;6136 4559;4560;4561;4562;4563;4564;4565;4566;4567;4568;4569;4570;4571;4572;4573 4573 327 15 80028000 73591000 0 0 181140000 181840000 0 0 ETLEIYSPLAHR TLGSLRPDKRRRIARETLEIYSPLAHRLGI IARETLEIYSPLAHRLGIHHIKTELEELGF R E T H R L 1 1 0 0 0 0 2 0 1 1 2 0 0 0 1 1 1 0 1 0 0 0 12 0 2 2 1427.7409 P0AG24 P0AG24 161 172 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT;GTP pyrophosphokinase;Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase yes yes 3 0.0058454 37.426 By matching By MS/MS 1 1 9194300 0 0 0 0 3165600 6028700 0 0 1074 254 1164 6137;6138 4574 4574 1 0 0 0 0 3818700 6678500 0 0 ETPPGPK PANYEPNSINDNWPRETPPGPKRGGFESYQ SINDNWPRETPPGPKRGGFESYQERVEGNK R E T P K R 0 0 0 0 0 0 1 1 0 0 0 1 0 0 3 0 1 0 0 0 0 0 7 0 1 3 724.37555 P21179 P21179 472 478 katE Catalase HPII yes yes 2 0.021741 45.882 By MS/MS By MS/MS By MS/MS 2 2 1 28300000 13324000 14538000 0 0 0 438190 0 0 1075 293 1165 6139;6140;6141;6142;6143 4575 4575 1 14210000 22490000 0 0 0 485420 0 0 ETQGKLEEKLQELEA HRDLTALCKEYDELAETQGKLEEKLQELEA ETQGKLEEKLQELEANPPSDVYLSSRDRQI A E T E A N 1 0 0 0 0 2 5 1 0 0 3 2 0 0 0 0 1 0 0 0 0 0 15 2 5 0 1743.8891 LSD1-FL-His LSD1-FL-His 501 515 yes yes 2;3 7.3609E-112 215.34 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 361960000 62723000 70953000 0 0 181560000 46725000 0 0 1076 24 1166 6144;6145;6146;6147;6148;6149;6150;6151 4576;4577;4578;4579;4580;4581;4582;4583 4582 8 378630000 424650000 0 0 258480000 66606000 0 0 ETQGKLEEKLQELEANPP HRDLTALCKEYDELAETQGKLEEKLQELEA GKLEEKLQELEANPPSDVYLSSRDRQILDW A E T P P S 1 0 1 0 0 2 5 1 0 0 3 2 0 0 2 0 1 0 0 0 0 0 18 2 5 2 2052.0375 LSD1-FL-His LSD1-FL-His 501 518 yes yes 2;3 3.4462E-68 163.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 448600000 16372000 14525000 0 0 207800000 209900000 0 0 1077 24 1167 6152;6153;6154;6155;6156;6157;6158;6159 4584;4585;4586;4587;4588 4586 3 98829000 86932000 0 0 295840000 299210000 0 0 ETQLVAWLVR QDVVHFAELHGLNSRETQLVAWLVRQHLLM GLNSRETQLVAWLVRQHLLMSVTAQRRDIQ R E T V R Q 1 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 1 1 0 2 0 0 10 0 1 1 1213.6819 P27249 P27249 545 554 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 1.8172E-12 116.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 83137000 29963000 27911000 0 0 0 25262000 0 0 1078 320 1168 6160;6161;6162;6163 4589;4590;4591;4592 4591 4 29963000 28570000 0 0 0 27985000 0 0 ETVLNLLALR FEECQVYRIDHYLGKETVLNLLALRFANSL HYLGKETVLNLLALRFANSLFVNNWDNRTI K E T L R F 1 1 1 0 0 0 1 0 0 0 4 0 0 0 0 0 1 0 0 1 0 0 10 0 1 1 1140.6867 P0AC53 P0AC53 182 191 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.017035 43.808 By MS/MS By MS/MS By matching By matching 1 1 1 1 69094000 15512000 15768000 0 0 15146000 22669000 0 0 1079 205 1169 6164;6165;6166;6167 4593 4593 1 15512000 16141000 0 0 18270000 25112000 0 0 EVAGSIQTLTR AIDLGSNSFHMLVVREVAGSIQTLTRIKRK LVVREVAGSIQTLTRIKRKVRLAAGLNSEN R E V T R I 1 1 0 0 0 1 1 1 0 1 1 0 0 0 0 1 2 0 0 1 0 0 11 0 1 1 1173.6354 P25552 P25552 25 35 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 2.6065E-64 173.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 290560000 82593000 59819000 0 0 67473000 80674000 0 0 1080 316 1170 6168;6169;6170;6171 4594;4595;4596;4597 4596 4 82593000 61231000 0 0 81393000 89368000 0 0 EVATNSELVQSGK DAEEWFFTKTEELNREVATNSELVQSGKSE NREVATNSELVQSGKSEISELRRTMQNLEI R E V G K S 1 0 1 0 0 1 2 1 0 0 1 1 0 0 0 2 1 0 0 2 0 0 13 0 2 1 1360.6834 CON__P02533 CON__P02533 316 328 no no 2 1.1125E-138 208.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75380000 11364000 10307000 0 0 25432000 28277000 0 0 + 1081 4 1171 6172;6173;6174;6175 4598;4599;4600;4601 4600 4 11364000 10550000 0 0 30679000 31325000 0 0 EVCSGDTGHAEAVR AAGYTGGYTPNPTYREVCSGDTGHAEAVRI REVCSGDTGHAEAVRIVYDPSVISYEQLLQ R E V V R I 2 1 0 1 1 0 2 2 1 0 0 0 0 0 0 1 1 0 0 2 0 0 14 0 2 2 1486.6471 P0A744 P0A744 85 98 msrA Peptide methionine sulfoxide reductase MsrA yes yes 3 0.0020874 50.897 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8376100 2373200 3518400 0 0 1591900 892650 0 0 1082 94 1172 6176;6177;6178;6179 4602;4603;4604 4602 3 2373200 3601400 0 0 1920300 988850 0 0 EVDQRSKILTTRLHSLE VKDPAKAIVVKKVLEEVDQRSKILTTRLHS DQRSKILTTRLHSLEEKSQSN_________ E E V L E E 0 2 0 1 0 1 2 0 1 1 3 1 0 0 0 2 2 0 0 1 0 0 17 3 1 0 2024.1015 CON__Q7Z3Z0 CON__Q7Z3Z0 428 444 yes yes 5 0.02338 10.099 By MS/MS By matching By matching 1 1 1 11170000 0 0 2266100 0 0 0 4534000 4369700 + 1083 20 1173 6180;6181;6182 4605 4605 0 0 0 19255000 0 0 0 34895000 25077000 EVDSIIR KVEATKFTEVGYVGKEVDSIIRDLTDAAVK TEVGYVGKEVDSIIRDLTDAAVKMVRVQAI K E V I R D 0 1 0 1 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 7 0 1 0 830.44978 P0A6H5 P0A6H5 95 101 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.00092767 104.11 By MS/MS By MS/MS By MS/MS 1 2 2 22488000 6851900 0 0 0 7211800 8424300 0 0 1084 71 1174 6183;6184;6185;6186;6187 4606;4607;4608;4609 4608 4 6851900 0 0 0 9221500 10015000 0 0 EVETTLVSK HSHRRILHAADATGREVETTLVSKALNHPN ADATGREVETTLVSKALNHPNIRVLERSNA R E V S K A 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 1 2 0 0 2 0 0 9 0 2 0 1004.539 P10902 P10902 139 147 nadB L-aspartate oxidase yes yes 2 0.00011351 104.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 233620000 60949000 68011000 0 0 52338000 52323000 0 0 1085 274 1175 6188;6189;6190;6191 4610;4611;4612;4613 4611 4 60949000 69616000 0 0 63135000 57962000 0 0 EVFTSSSSSSSR HLSSQQASGQSYSSREVFTSSSSSSSRQTR SSREVFTSSSSSSSRQTRPILKEQSSSSFS R E V S R Q 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 7 1 0 0 1 0 0 12 0 1 0 1259.563 CON__P08779 CON__P08779 442 453 yes yes 2 1.8978E-06 82.749 By MS/MS By MS/MS By matching 1 1 1 10475000 4240900 4272900 0 0 1961100 0 0 0 + 1086 10 1176 6192;6193;6194 4614;4615 4614 2 4240900 4373800 0 0 2365700 0 0 0 EVIPFGASLR PLNQGAWYCSQHHFREVIPFGASLRYAGRP QHHFREVIPFGASLRYAGRPASASPAVGYM R E V L R Y 1 1 0 0 0 0 1 1 0 1 1 0 0 1 1 1 0 0 0 1 0 0 10 0 1 2 1087.6026 P0AFG3 P0AFG3 891 900 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0001167 106.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 255400000 50474000 77524000 0 0 67564000 59835000 0 0 1087 246 1177 6195;6196;6197;6198 4616;4617;4618;4619 4617 4 50474000 79354000 0 0 81503000 66283000 0 0 EVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQP EITRRSVNIFDKTGAEVKRQDIESNLQYDA GIYRHYMQKEIYEQPNAIKNTLTGRISHGQ A E V Q P N 1 2 1 3 0 4 4 2 1 3 1 3 1 0 1 1 0 0 4 1 0 0 33 5 4 1 4042.9483 P17169 P17169 229 261 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 5 1.8687E-10 48.422 By MS/MS By MS/MS 2 1 64526000 0 0 0 0 40124000 24403000 0 0 1088 288 1178;1179 6199;6200;6201 4620;4621;4622 4620 244 3 0 0 0 0 57124000 34786000 0 0 EVLKSGSTTQA ______________________________ EVFAEVLKSGSTTQASVMLALSQSAVSAAL A E V Q A S 1 0 0 0 0 1 1 1 0 0 1 1 0 0 0 2 2 0 0 1 0 0 11 1 1 0 1119.5772 P0ACR4 P0ACR4 13 23 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 0.00061982 78.334 By MS/MS By MS/MS By MS/MS 1 1 1 30589000 7682600 7653100 0 0 0 15253000 0 0 1089 218 1180 6202;6203;6204 4623 4623 1 46376000 45804000 0 0 0 21744000 0 0 EVLRPVADELR NLGQENFDAAEKAAREVLRPVADELRYHGW KAAREVLRPVADELRYHGWKVCVGASGTVQ R E V L R Y 1 2 0 1 0 0 2 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 11 1 2 2 1295.7197 P25552 P25552 191 201 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2;3 5.6237E-51 170.47 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 612380000 177020000 140840000 0 0 131630000 162880000 0 0 1090 316 1181 6205;6206;6207;6208;6209;6210;6211;6212 4624;4625;4626;4627;4628;4629;4630;4631 4629 8 177020000 144170000 0 0 158790000 180430000 0 0 EVMEESGIK GFVEVGETLEQAVAREVMEESGIKVKNLRY EQAVAREVMEESGIKVKNLRYVTSQPWPFP R E V I K V 0 0 0 0 0 0 3 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 9 0 3 0 1020.4798 P32664 P32664 174 182 nudC NADH pyrophosphatase yes yes 2 3.0019E-09 119.27 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 127670000 29878000 39412000 0 0 27982000 30400000 0 0 1091 340 1182;1183 6213;6214;6215;6216;6217;6218;6219;6220;6221 4632;4633;4634;4635;4636 4632 5 29878000 40342000 0 0 33755000 33676000 0 0 EVPAAIQK GDGNGRVGFGYGKAREVPAAIQKAMEKARR FGYGKAREVPAAIQKAMEKARRNMINVALN R E V Q K A 2 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 8 0 1 3 854.48617 P0A7W1 P0A7W1 55 62 rpsE 30S ribosomal protein S5 yes yes 2 0.0034143 69.093 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 63330000 14265000 17061000 0 0 15675000 16329000 0 0 1092 131 1184 6222;6223;6224;6225 4637;4638;4639 4639 3 14265000 17464000 0 0 18909000 18089000 0 0 EVPGAAETILR QGRWLVRIEDIDPPREVPGAAETILRQLEH DPPREVPGAAETILRQLEHYGLHWDGDVLW R E V L R Q 2 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 11 0 2 3 1154.6295 P27305 P27305 62 72 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 2 0.00034182 52.579 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 495300000 41461000 38469000 80556000 83048000 20529000 20805000 91243000 119180000 1093 322 1185 6226;6227;6228;6229;6230;6231;6232;6233;6234;6235;6236;6237 4640;4641;4642;4643 4640 4 637040000 459010000 684470000 629640000 221830000 183740000 702230000 683980000 EVTIGAR RYKVKLLRNGETREREVTIGARNDTDVEIV RNGETREREVTIGARNDTDVEIVKGLEAGD R E V A R N 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 7 0 1 1 744.413 P75830 P75830 337 343 macA Macrolide export protein MacA yes yes 2 0.00034041 83.287 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 378500000 64084000 65023000 12753000 10220000 93891000 95622000 18275000 18634000 1094 409 1186 6238;6239;6240;6241;6242;6243;6244;6245 4644;4645;4646;4647 4647 3 64084000 66557000 108360000 77483000 113260000 105930000 140650000 106940000 EVTLAYGGMR DRVTEFGAMVIKAAKEVTLAYGGMR_____ IKAAKEVTLAYGGMR_______________ K E V M R - 1 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 1 1 0 0 10 0 1 1 1095.5383 P16528 P16528 265 274 iclR Acetate operon repressor yes yes 2 1.0452E-37 157.34 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 282800000 89674000 63408000 0 0 50427000 75964000 0 3329400 1095 285 1187;1188 6246;6247;6248;6249;6250;6251;6252;6253;6254 4648;4649;4650;4651;4652;4653;4654;4655 4653 233 8 89674000 64905000 0 0 60830000 84151000 0 19107000 EVTVEDLMK LYCHNRDTWDTHGGKEVTVEDLMKEVVTYR DTHGGKEVTVEDLMKEVVTYRHFMNASGGG K E V M K E 0 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 2 0 0 9 0 2 0 1062.5267 P0A9N4 P0A9N4 50 58 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 3.3559E-27 149.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 235090000 64733000 69929000 0 0 45407000 55024000 0 0 1096 171 1189;1190 6255;6256;6257;6258;6259;6260 4656;4657;4658;4659;4660;4661;4662 4659 163 7 64733000 71580000 0 0 54774000 60955000 0 0 EVVLGMAHR MLKEMIRHAGNSGTREVVLGMAHRGRLNVL GNSGTREVVLGMAHRGRLNVLVNVLGKKPQ R E V H R G 1 1 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 2 0 0 9 0 1 1 1010.5331 P0AFG3 P0AFG3 253 261 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 1.3663E-60 177.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 192930000 53657000 52955000 0 0 46831000 39487000 0 0 1097 246 1191 6261;6262;6263;6264 4663;4664;4665;4666 4663 4 53657000 54205000 0 0 56492000 43743000 0 0 EYAATQVDGQR PGEKFTAAEFRAKCREYAATQVDGQRKDFI AKCREYAATQVDGQRKDFIRLGVLGDWSHP R E Y Q R K 2 1 0 1 0 2 1 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 11 0 1 2 1236.5735 P00956 P00956 128 138 ileS Isoleucine--tRNA ligase yes yes 2 2.0524E-08 116.3 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14874000 5422600 2955400 0 0 2842000 3654000 0 0 1098 32 1192 6265;6266;6267;6268 4667;4668;4669 4667 3 5422600 3025100 0 0 3428300 4047800 0 0 EYDELAETQGK FLVKSKHRDLTALCKEYDELAETQGKLEEK ALCKEYDELAETQGKLEEKLQELEANPPSD K E Y G K L 1 0 0 1 0 1 3 1 0 0 1 1 0 0 0 0 1 0 1 0 0 0 11 0 3 1 1281.5725 LSD1-FL-His LSD1-FL-His 495 505 yes yes 2 2.2092E-79 224.86 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 5 4 34150000000 9473400000 7111000000 0 0 9092400000 8473000000 0 0 1099 24 1193;1194 6269;6270;6271;6272;6273;6274;6275;6276;6277;6278;6279;6280;6281;6282;6283;6284 4670;4671;4672;4673;4674;4675;4676;4677;4678;4679;4680;4681;4682 4671 42 11 9473400000 7292900000 0 0 10997000000 9386100000 0 0 EYDELAETQGKLEEK FLVKSKHRDLTALCKEYDELAETQGKLEEK EYDELAETQGKLEEKLQELEANPPSDVYLS K E Y E K L 1 0 0 1 0 1 5 1 0 0 2 2 0 0 0 0 1 0 1 0 0 0 15 1 5 1 1780.8367 LSD1-FL-His LSD1-FL-His 495 509 yes yes 2;3 0 374.47 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 4 11722000000 4817500000 5795400000 0 0 540510000 568790000 0 0 1100 24 1195;1196 6285;6286;6287;6288;6289;6290;6291;6292;6293;6294;6295;6296;6297;6298 4683;4684;4685;4686;4687;4688;4689;4690;4691;4692;4693 4684 42 8 4861000000 5932200000 0 0 652020000 630090000 0 0 EYIDFAGGIAVNALGHAHPELR PVRGEGSRLWDQQGKEYIDFAGGIAVNALG GIAVNALGHAHPELREALNEQASKFWHTGN K E Y L R E 4 1 1 1 0 0 2 3 2 2 2 0 0 1 1 0 0 0 1 1 0 0 22 0 2 5 2349.1866 P77581 P77581 40 61 astC Succinylornithine transaminase yes yes 4 4.2836E-08 68.49 By MS/MS By MS/MS 1 1 13348000 0 0 0 0 5606200 7741800 0 0 1101 437 1197 6299;6300 4694;4695 4694 2 0 0 0 0 6762800 8576200 0 0 EYKLDGVKPPKKE PYHELGKHKWVAMGEEYKLDGVKPPKKETM GEEYKLDGVKPPKKETMERVKGILEQYGHK E E Y K E T 0 0 0 1 0 0 2 1 0 0 1 4 0 0 2 0 0 0 1 1 0 0 13 4 1 2 1529.8453 P0A9N4 P0A9N4 216 228 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3;4 0.0038356 30.828 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 620420000 36271000 55355000 88169000 112310000 18827000 19687000 126920000 162880000 1102 171 1198 6301;6302;6303;6304;6305;6306;6307;6308;6309;6310;6311;6312;6313;6314;6315;6316 4696;4697;4698;4699 4699 4 557290000 844170000 749160000 851450000 289850000 298390000 976840000 934760000 EYQELMNTK EALQKAKQDMARLLREYQELMNTKLALDVE MARLLREYQELMNTKLALDVEIATYRKLLE R E Y T K L 0 0 1 0 0 1 2 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 9 0 2 0 1154.5278 CON__P13647 CON__P13647 452 460 no no 2 3.0109E-27 150.05 By MS/MS By MS/MS By MS/MS 1 1 1 51551000 0 8386600 0 0 20969000 22196000 0 0 + 1103 13 1199 6317;6318;6319 4700;4701;4702 4701 3 0 8584500 0 0 25295000 24588000 0 0 EYQYQEVK TIFRELEVFVRSKLKEYQYQEVKGPFMMDR FVRSKLKEYQYQEVKGPFMMDRVLWEKTGH K E Y V K G 0 0 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 8 0 2 0 1085.5029 P0A8M3 P0A8M3 287 294 thrS Threonine--tRNA ligase yes yes 2 0.0011714 107.59 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36532000 8539300 9050400 0 0 9323600 9619000 0 0 1104 147 1200 6320;6321;6322;6323 4703;4704;4705;4706 4704 4 8539300 9264000 0 0 11247000 10656000 0 0 FAAACEHFVSR ALNVSEEEVTTGLDRFAAACEHFVSRGSS_ GLDRFAAACEHFVSRGSS____________ R F A S R G 3 1 0 0 1 0 1 0 1 0 0 0 0 2 0 1 0 0 0 1 0 0 11 0 1 3 1293.5924 P77581 P77581 393 403 astC Succinylornithine transaminase yes yes 2 2.2859E-05 100.48 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25811000 8440500 4910600 0 0 6948000 5511900 0 0 1105 437 1201 6324;6325;6326;6327 4707;4708;4709;4710 4707 4 8440500 5026500 0 0 8381400 6106000 0 0 FADEQGVPRPK CPQDIMPLTELFVARFADEQGVPRPKLAAD FVARFADEQGVPRPKLAADLNTVLTRYAWP R F A P K L 1 1 0 1 0 1 1 1 0 0 0 1 0 1 2 0 0 0 0 1 0 0 11 1 1 3 1242.6357 P07604 P07604 388 398 tyrR Transcriptional regulatory protein TyrR yes yes 3 0.011002 34.087 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19272000 5266700 5106200 0 0 4384000 4514900 0 0 1106 58 1202 6328;6329;6330;6331 4711;4712;4713 4712 3 5266700 5226700 0 0 5288400 5001500 0 0 FAEWGIK SKLGKRISARNVQKRFAEWGIKQGLNNHVH SARNVQKRFAEWGIKQGLNNHVHPHKLRHS R F A I K Q 1 0 0 0 0 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 0 0 7 0 1 1 849.43849 P0A8P6 P0A8P6 224 230 xerC Tyrosine recombinase XerC yes yes 2 0.0025404 79.454 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76105000 19068000 21535000 0 0 13768000 21734000 0 0 1107 150 1203 6332;6333;6334;6335 4714;4715;4716;4717 4714 4 19068000 22043000 0 0 16609000 24076000 0 0 FAFYGLPESSGK VESAFLHLKEKGVNRFAFYGLPESSGKRWA VNRFAFYGLPESSGKRWATEREYAFRQLVA R F A G K R 1 0 0 0 0 0 1 2 0 0 1 1 0 2 1 2 0 0 1 0 0 0 12 0 1 2 1301.6292 P0ACI3 P0ACI3 122 133 xylR Xylose operon regulatory protein yes yes 2 0.0001692 74.162 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 7508900 0 0 981430 1164500 5363000 0 0 0 1108 212 1204 6336;6337;6338;6339 4718;4719 4718 2 0 0 8339100 8828400 6469400 0 0 0 FAHAVAK SLVVEDADIDEGMQRFAHAVAKVVGA____ DIDEGMQRFAHAVAKVVGA___________ R F A A K V 3 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 7 0 0 3 742.41261 P18335 P18335 396 402 argD Acetylornithine/succinyldiaminopimelate aminotransferase yes yes 2 0.0033515 60.001 By MS/MS 1 0 0 0 0 0 0 0 0 0 1109 291 1205 6340 4720 4720 1 0 0 0 0 0 0 0 0 FAKANAKFE YSMEHPGAAARLFKEFAKANAKFEVKAAAF ARLFKEFAKANAKFEVKAAAFEGELIPASQ E F A F E V 3 0 1 0 0 0 1 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 9 2 0 3 1024.5342 P0A7J3 P0A7J3 99 107 rplJ 50S ribosomal protein L10 yes yes 2 0.0013989 96.331 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 11838000 1825200 1770000 0 0 1533900 1049400 0 5659200 1110 106 1206 6341;6342;6343;6344;6345 4721 4721 1 28043000 26993000 0 0 23616000 15906000 0 32477000 FAKVILAGE LNTLKAANIIGIQIEFAKVILAGEVTTPVT IGIQIEFAKVILAGEVTTPVTVRGLRVTKG E F A G E V 2 0 0 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 1 0 2 946.54877 P02413 P02413 107 115 rplO 50S ribosomal protein L15 yes yes 2 0.0073603 68.383 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 212870000 11090000 11682000 37418000 35502000 8071800 9104100 42033000 57967000 1111 37 1207 6346;6347;6348;6349;6350;6351;6352;6353 4722;4723;4724;4725 4722 4 170390000 178150000 317930000 269160000 124270000 137990000 323490000 332660000 FALIENR SPGIGFGDYGDTHVRFALIENRDRIRQAIR DYGDTHVRFALIENRDRIRQAIRGIKAMFR R F A N R D 1 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 1 1 861.47085 P77434 P77434 374 380 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 4.3189E-11 128.82 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 1 202610000 33949000 47000000 725320 0 49061000 47389000 10437000 14053000 1112 433 1208 6354;6355;6356;6357;6358;6359;6360;6361;6362 4726;4727;4728;4729 4729 4 33949000 48110000 6162900 0 122740000 53379000 80326000 80649000 FANATPLSTLSLKHWDQDDDFE SRDRQILDWHFANLEFANATPLSTLSLKHW STLSLKHWDQDDDFEFTGSHLTVRNGYSCV E F A F E F 2 0 1 4 0 1 1 0 1 0 3 1 0 2 1 2 2 1 0 0 0 0 22 1 0 3 2549.171 LSD1-FL-His LSD1-FL-His 540 561 yes yes 3 6.5254E-17 81.967 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 186100000 6070600 6470100 0 0 88654000 84904000 0 0 1113 24 1209 6363;6364;6365;6366 4730;4731 4731 2 93274000 98670000 0 0 1364900000 1286900000 0 0 FANEFAR YHHHRDIKEDFRPHRFANEFARSKAASEEV KEDFRPHRFANEFARSKAASEEVINMLSQA R F A A R S 2 1 1 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 7 0 1 2 853.40825 P75821 P75821 136 142 ybjS Uncharacterized protein YbjS yes yes 2 0.001075 103.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24973000 5627000 6619100 0 0 6582900 6144500 0 0 1114 408 1210 6367;6368;6369;6370 4732;4733;4734;4735 4734 4 5627000 6775300 0 0 7941000 6806700 0 0 FANKHNMALVTIE TNDDGTMARAPECIEFANKHNMALVTIEDL IEFANKHNMALVTIEDLVAYRQAHERKAS_ E F A I E D 2 0 2 0 0 0 1 0 1 1 1 1 1 1 0 0 1 0 0 1 0 0 13 1 0 2 1486.7602 P0A7J0 P0A7J0 191 203 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2;3 0.00064584 70.028 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 2 2 235910000 17091000 20319000 56469000 57040000 13484000 11297000 25078000 35128000 1115 105 1211 6371;6372;6373;6374;6375;6376;6377;6378;6379;6380;6381;6382;6383;6384;6385 4736;4737;4738;4739;4740;4741 4741 6 262590000 309860000 479810000 432450000 207600000 171230000 193000000 201590000 FANKHNMALVTIEDLVAYRQAHE TNDDGTMARAPECIEFANKHNMALVTIEDL LVTIEDLVAYRQAHERKAS___________ E F A H E R 4 1 2 1 0 1 2 0 2 1 2 1 1 1 0 0 1 0 1 2 0 0 23 2 1 4 2669.3384 P0A7J0 P0A7J0 191 213 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 4 3.8351E-40 109.85 By matching By MS/MS By MS/MS 1 2 2 242860000 0 472820 0 0 123960000 118430000 0 0 1116 105 1212;1213 6386;6387;6388;6389;6390 4742;4743;4744;4745 4742 112 4 0 7210600 0 0 1908400000 1795000000 0 0 FANKHNMALVTIEDLVAYRQAHERKAS TNDDGTMARAPECIEFANKHNMALVTIEDL EDLVAYRQAHERKAS_______________ E F A A S - 5 2 2 1 0 1 2 0 2 1 2 2 1 1 0 1 1 0 1 2 0 0 27 4 2 5 3111.6036 P0A7J0 P0A7J0 191 217 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 5 4.956E-05 41.763 By MS/MS By MS/MS 2 2 34986000 0 0 0 0 18553000 16433000 0 0 1117 105 1214;1215 6391;6392;6393;6394 4746;4747;4748;4749 4746 112 4 0 0 0 0 285640000 249070000 0 0 FANPQEGSVVFDDQIR HSHEHHADDEPCVVRFANPQEGSVVFDDQI ANPQEGSVVFDDQIRGPIEFSNQELDDLII R F A I R G 1 1 1 2 0 2 1 1 0 1 0 0 0 2 1 1 0 0 0 2 0 0 16 0 1 2 1820.8693 P04805 P04805 142 157 gltX Glutamate--tRNA ligase yes yes 2 3.5851E-68 163.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 77154000 0 23063000 0 0 27524000 26567000 0 0 1118 45 1216 6395;6396;6397;6398 4750;4751;4752 4752 3 0 23607000 0 0 33203000 29430000 0 0 FAPALNVSEEEVTTGLDR KAGVMVLIAGGNVVRFAPALNVSEEEVTTG ALNVSEEEVTTGLDRFAAACEHFVSRGSS_ R F A D R F 2 1 1 1 0 0 3 1 0 0 2 0 0 1 1 1 2 0 0 2 0 0 18 0 3 3 1946.9585 P77581 P77581 375 392 astC Succinylornithine transaminase yes yes 2;3 2.9786E-186 278.27 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 470030000 136250000 101390000 0 0 121570000 110820000 0 0 1119 437 1217 6399;6400;6401;6402;6403;6404;6405;6406 4753;4754;4755;4756;4757;4758;4759;4760 4757 8 136250000 103780000 0 0 146650000 122770000 0 0 FAPSLVVEDADIDEGMQR EAGVMVLNAGPDVMRFAPSLVVEDADIDEG SLVVEDADIDEGMQRFAHAVAKVVGA____ R F A Q R F 2 1 0 3 0 1 2 1 0 1 1 0 1 1 1 1 0 0 0 2 0 0 18 0 2 3 1990.9306 P18335 P18335 378 395 argD Acetylornithine/succinyldiaminopimelate aminotransferase yes yes 2 1.0234E-11 86.467 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21250000 7701300 4345600 0 0 4954200 4248400 0 0 1120 291 1218 6407;6408;6409;6410 4761;4762;4763;4764 4762 4 7701300 4448100 0 0 5976300 4706300 0 0 FAPSPTGYLHVGGAR ______________________________ FAPSPTGYLHVGGARTALYSWLFARNHGGE R F A A R T 2 1 0 0 0 0 0 3 1 0 1 0 0 1 2 1 1 0 1 1 0 0 15 0 0 4 1528.7787 P04805 P04805 7 21 gltX Glutamate--tRNA ligase yes yes 2;3 5.247E-13 84.566 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 89841000 26713000 16810000 0 0 19051000 27266000 0 0 1121 45 1219 6411;6412;6413;6414;6415 4765;4766;4767;4768;4769 4767 5 26713000 17207000 0 0 22981000 30205000 0 0 FAQLSTVK DIHSRANNPTSRMMRFAQLSTVKAFSPN__ PTSRMMRFAQLSTVKAFSPN__________ R F A V K A 1 0 0 0 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 8 0 0 1 892.50182 P0ADM8 P0ADM8 237 244 yieE Uncharacterized protein YieE yes yes 2 0.017998 47.749 By matching By MS/MS By matching By matching 1 1 1 1 17799000 4449700 6410200 0 0 3534500 3404300 0 0 1122 223 1220 6416;6417;6418;6419 4770 4770 1 4449700 6561400 0 0 4263700 3771200 0 0 FAQLYTQVAGR VDGALFSADFRSAERFAQLYTQVAGRAGRA SAERFAQLYTQVAGRAGRAGKQGEVVLQTH R F A G R A 2 1 0 0 0 2 0 1 0 0 1 0 0 1 0 0 1 0 1 1 0 0 11 0 0 2 1252.6564 P17888 P17888 574 584 priA Primosomal protein N yes yes 2 0.00014937 83.948 By matching By matching By MS/MS By MS/MS 1 1 1 1 31726000 9780900 8178000 0 0 5879900 7887100 0 0 1123 290 1221 6420;6421;6422;6423 4771;4772 4772 2 9780900 8371000 0 0 7093000 8737100 0 0 FASFIDK VKAQEREQIKTLNNKFASFIDKVRFLEQQN QIKTLNNKFASFIDKVRFLEQQNQVLQTKW K F A D K V 1 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 7 0 0 1 826.4225 CON__P35908v2;CON__P35908;CON__P19013;CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__Q8VED5;CON__P13647;CON__Q32MB2;CON__Q7RTS7;CON__Q3SY84;CON__Q7Z794 CON__P35908v2 189 195 no no 2 0.0013597 101.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 578860000 105510000 78269000 0 0 159780000 235310000 0 0 + 1124 16;13;5;21;18 1222 6424;6425;6426;6427 4773;4774;4775;4776 4773 4 105510000 80116000 0 0 192740000 260670000 0 0 FASFIDKVR VKAQEREQIKTLNNKFASFIDKVRFLEQQN KTLNNKFASFIDKVRFLEQQNQVLQTKWEL K F A V R F 1 1 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 1 0 0 9 1 0 1 1081.592 CON__P35908v2;CON__P35908;CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__Q8VED5;CON__P13647;CON__Q32MB2;CON__Q7RTS7;CON__Q3SY84;CON__Q7Z794 CON__P35908v2 189 197 no no 3 0.0052306 38.303 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 1125 16;13;5;21;18 1223 6428 4777 4777 1 0 0 0 0 0 0 0 0 FASSFYGPFR AAGFKDTAIMSYSTKFASSFYGPFREAAGS SYSTKFASSFYGPFREAAGSALKGDRKSYQ K F A F R E 1 1 0 0 0 0 0 1 0 0 0 0 0 3 1 2 0 0 1 0 0 0 10 0 0 2 1177.5556 P0ACB2 P0ACB2 196 205 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.00016143 95.741 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75338000 17854000 17811000 0 0 16837000 22835000 0 0 1126 207 1224 6429;6430;6431;6432 4778;4779;4780;4781 4779 4 17854000 18232000 0 0 20311000 25296000 0 0 FASTHTDSSAQTVSLEDYVSR AEDFANQEAIAKLLRFASTHTDSSAQTVSL DSSAQTVSLEDYVSRMKEGQEKIYYITADS R F A S R M 2 1 0 2 0 1 1 0 1 0 1 0 0 1 0 5 3 0 1 2 0 0 21 0 1 2 2300.0557 P0A6Z3 P0A6Z3 402 422 htpG Chaperone protein HtpG yes yes 3 1.279E-72 154.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 220290000 66915000 64377000 0 0 44121000 44880000 0 0 1127 88 1225 6433;6434;6435;6436 4782;4783;4784;4785 4782 4 66915000 65896000 0 0 53224000 49717000 0 0 FATSDLNDLYR LPPDLRPLVPLDGGRFATSDLNDLYRRVIN DGGRFATSDLNDLYRRVINRNNRLKRLLDL R F A Y R R 1 1 1 2 0 0 0 0 0 0 2 0 0 1 0 1 1 0 1 0 0 0 11 0 0 1 1313.6252 P0A8T7 P0A8T7 260 270 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 8.6019E-12 123.86 By MS/MS By MS/MS By MS/MS 1 1 1 33672000 0 10495000 0 0 12198000 10979000 0 0 1128 153 1226 6437;6438;6439 4786;4787;4788 4788 3 0 10743000 0 0 14715000 12163000 0 0 FDDGRWTRDP GAGGLLLAGHTDTVPFDDGRWTRDPFTLTE TDTVPFDDGRWTRDPFTLTEHDGKLYGLGT P F D D P F 0 2 0 3 0 0 0 1 0 0 0 0 0 1 1 0 1 1 0 0 0 0 10 2 0 0 1263.5632 P23908 P23908 86 95 argE Acetylornithine deacetylase yes yes 3 0.018513 32.008 By MS/MS By MS/MS By MS/MS 1 1 1 10110000 916640 0 0 0 3413600 5780000 0 0 1129 308 1227 6440;6441;6442 4789 4789 1 5533300 0 0 0 4860000 8239400 0 0 FDDNSYK SAAEVIMTVLHAGGKFDDNSYKVSGGLHGV TVLHAGGKFDDNSYKVSGGLHGVGVSVVNA K F D Y K V 0 0 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 7 0 0 0 887.36611 P0AES6 P0AES6 104 110 gyrB DNA gyrase subunit B yes yes 2 0.0025755 79.146 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61224000 14114000 21588000 0 0 14317000 11206000 0 0 1130 239 1228 6443;6444;6445;6446 4790;4791;4792;4793 4791 4 14114000 22097000 0 0 17270000 12413000 0 0 FDDSTLIR ______________________________ ______________________________ R F D I R I 0 1 0 2 0 0 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 8 0 0 0 965.48181 P24252 P24252 6 13 ybgA Uncharacterized protein YbgA yes yes 2 7.4273E-131 180.7 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 378920000 106960000 86799000 22277000 27278000 0 110710000 24904000 0 1131 313 1229 6447;6448;6449;6450;6451;6452 4794;4795 4794 1 106960000 88848000 189280000 206810000 0 122640000 191660000 0 FDEFAEAIK EQIIVEFTESEVISRFDEFAEAIKSLKAAG SEVISRFDEFAEAIKSLKAAGISVAIDHFG R F D I K S 2 0 0 1 0 0 2 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 9 0 2 2 1068.5128 P75990 P75990 285 293 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 1.2948E-05 80.165 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19544000 6474300 6172300 0 0 0 6897200 0 0 1132 414 1230 6453;6454;6455;6456 4796;4797;4798;4799 4798 3 6474300 6318000 0 0 0 7640600 0 0 FDEHHLGADGADR HALSMPHGQFTIDVKFDEHHLGADGADRIE VKFDEHHLGADGADRIEFRVTTNPGQPMQP K F D D R I 2 1 0 3 0 0 1 2 2 0 1 0 0 1 0 0 0 0 0 0 0 0 13 0 1 2 1438.6226 P05824 P05824 399 411 recN DNA repair protein RecN yes yes 3 0.00024212 64.104 By MS/MS By MS/MS By MS/MS 1 1 1 34155000 10732000 14071000 0 0 0 9352000 0 0 1133 49 1231 6457;6458;6459 4800;4801;4802 4802 3 10732000 14403000 0 0 0 10360000 0 0 FDEHHLGADGADRIEFR HALSMPHGQFTIDVKFDEHHLGADGADRIE EHHLGADGADRIEFRVTTNPGQPMQPIAKV K F D F R V 2 2 0 3 0 0 2 2 2 1 1 0 0 2 0 0 0 0 0 0 0 0 17 1 2 2 1983.9187 P05824 P05824 399 415 recN DNA repair protein RecN yes yes 4 2.7503E-05 63.134 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54938000 22617000 17782000 0 0 6368500 8170500 0 0 1134 49 1232 6460;6461;6462;6463 4803;4804;4805;4806;4807 4806 5 22617000 18202000 0 0 7682300 9051100 0 0 FDFSHNEAMKPEEIR HVSQKGSLVNDKVLRFDFSHNEAMKPEEIR FDFSHNEAMKPEEIRAVEDLVNTQIRRNLP R F D I R A 1 1 1 1 0 0 3 0 1 1 0 1 1 2 1 1 0 0 0 0 0 0 15 1 3 2 1848.8465 P00957 P00957 596 610 alaS Alanine--tRNA ligase yes yes 3;4 4.5223E-10 84.508 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 50632000 15570000 16565000 0 0 6757600 11740000 0 0 1135 33 1233 6464;6465;6466;6467;6468;6469;6470 4808;4809;4810;4811 4811 4 15570000 16956000 0 0 8151700 13005000 0 0 FDGKPFQSVSKVDE LSDRIDEWMMNYLTEFDGKPFQSVSKVDES EFDGKPFQSVSKVDESLEKLADEVDESAKE E F D D E S 0 0 0 2 0 1 1 1 0 0 0 2 0 2 1 2 0 0 0 2 0 0 14 2 0 1 1581.7675 P0A6Z3 P0A6Z3 475 488 htpG Chaperone protein HtpG yes yes 3 0.005479 46.481 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 67798000 5341700 3884600 14275000 16699000 0 0 18065000 9532300 1136 88 1234 6471;6472;6473;6474;6475;6476 4812;4813 4812 2 82073000 59241000 121290000 126610000 0 0 139030000 54704000 FDGNACVLLNNNSEQPIGTR RTKKGVRRPDGSVIRFDGNACVLLNNNSEQ CVLLNNNSEQPIGTRIFGPVTRELRSEKFM R F D T R I 1 1 4 1 1 1 1 2 0 1 2 0 0 1 1 1 1 0 0 1 0 0 20 0 1 2 2218.0437 P0ADY3 P0ADY3 79 98 rplN 50S ribosomal protein L14 yes yes 2;3 0 278.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 314160000 102420000 64641000 0 0 65084000 82012000 0 0 1137 228 1235 6477;6478;6479;6480;6481;6482;6483;6484 4814;4815;4816;4817;4818;4819;4820 4820 7 102420000 66166000 0 0 78512000 90851000 0 0 FDGTVEVK DYMAYMLKYDSTHGRFDGTVEVKDGHLIVN YDSTHGRFDGTVEVKDGHLIVNGKKIRVTA R F D V K D 0 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 8 0 1 0 893.44945 P0A9B2 P0A9B2 54 61 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 0.002676 77.923 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22016000 4777900 5731700 0 0 5742600 5763400 0 0 1138 163 1236 6485;6486;6487;6488 4821;4822;4823;4824 4823 4 4777900 5867000 0 0 6927300 6384600 0 0 FDITQLD DAQIKKIIAVIDRAAFDITQLD________ IAVIDRAAFDITQLD_______________ A F D L D - 0 0 0 2 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 7 0 0 0 850.40725 P64588 P64588 201 207 yqjI Transcriptional regulator YqjI yes yes 1 0.0041282 66.994 By MS/MS By MS/MS By MS/MS 1 1 1 16343000 3990500 4526600 0 0 7825900 0 0 0 1139 398 1237 6489;6490;6491 4825 4825 1 24089000 27092000 0 0 11142000 0 0 0 FDKLAFEPGVIPELLK GTLISEPPSDFQVDRFDKLAFEPGVIPELL DKLAFEPGVIPELLKLQKAGYKLVMITNQD R F D L K L 1 0 0 1 0 0 2 1 0 1 3 2 0 2 2 0 0 0 0 1 0 0 16 1 2 3 1815.0182 P06987 P06987 27 42 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2;3 1.29E-16 122.45 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 417990000 157320000 144470000 0 0 46842000 69357000 0 0 1140 55 1238 6492;6493;6494;6495;6496;6497;6498 4826;4827;4828;4829;4830 4826 5 157320000 147880000 0 0 56506000 76832000 0 0 FDPILLRPVDDLE LRDVRQPEVKEEKPEFDPILLRPVDDLELT PEFDPILLRPVDDLELTVRSANCLKAEAIH E F D L E L 0 1 0 3 0 0 1 0 0 1 3 0 0 1 2 0 0 0 0 1 0 0 13 1 0 2 1540.8137 P0A7Z4 P0A7Z4 249 261 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 3.0335E-10 94.616 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 40450000 4682400 6212900 2352500 0 6137200 13566000 0 7499400 1141 135 1239 6499;6500;6501;6502;6503;6504;6505;6506 4831;4832;4833 4833 3 4682400 40232000 19989000 0 94488000 158360000 0 43038000 FDSQQTFTR RLTARPILDIALQYRFDSQQTFTRAFKKQF IALQYRFDSQQTFTRAFKKQFAQTPALYRR R F D T R A 0 1 0 1 0 2 0 0 0 0 0 0 0 2 0 1 2 0 0 0 0 0 9 0 0 0 1128.52 P0ACI0 P0ACI0 82 90 rob Right origin-binding protein yes yes 2 1.3272E-75 210.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 162330000 40862000 41089000 0 0 42445000 37929000 0 0 1142 211 1240 6507;6508;6509;6510 4834;4835;4836;4837 4834 4 40862000 42059000 0 0 51201000 42017000 0 0 FDVAVGANDAYGQYDENLVQR SGLETALEGHEVGDKFDVAVGANDAYGQYD ANDAYGQYDENLVQRVPKDVFMGVDELQVG K F D Q R V 3 1 2 3 0 2 1 2 0 0 1 0 0 1 0 0 0 0 2 3 0 0 21 0 1 3 2343.0768 P0A9K9 P0A9K9 58 78 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 0 309.23 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1581800000 293870000 301740000 0 0 613080000 373130000 0 0 1143 169 1241 6511;6512;6513;6514;6515;6516;6517;6518 4838;4839;4840;4841;4842;4843;4844;4845;4846;4847;4848;4849;4850;4851;4852 4838 15 293870000 308860000 0 0 739560000 413340000 0 0 FDVHTNAEQNLFEPIVR VSELNDKEQHGSQWKFDVHTNAEQNLFEPI VHTNAEQNLFEPIVRVRTHGVDTDYPLDHE K F D V R V 1 1 2 1 0 1 2 0 1 1 1 0 0 2 1 0 1 0 0 2 0 0 17 0 2 2 2028.0065 P0AES6 P0AES6 649 665 gyrB DNA gyrase subunit B yes yes 3 6.6074E-117 157.8 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 139540000 34433000 32689000 0 0 32935000 39484000 0 0 1144 239 1242 6519;6520;6521;6522 4853;4854;4855;4856;4857;4858 4853 6 34433000 33460000 0 0 39730000 43739000 0 0 FDYLIRTKTA IIIATGEGAKASLSAFDYLIRTKTA_____ ASLSAFDYLIRTKTA_______________ A F D T A - 1 1 0 1 0 0 0 0 0 1 1 1 0 1 0 0 2 0 1 0 0 0 10 2 0 0 1226.6659 P35340 P35340 512 521 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 1.6498E-05 109.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 295700000 3284300 2543800 0 0 188690000 101190000 0 0 1145 348 1243 6523;6524;6525;6526;6527;6528 4859;4860;4861;4862;4863;4864;4865;4866 4866 8 19826000 15224000 0 0 268630000 144240000 0 0 FEELVQTR KMVRDAEANAEADRKFEELVQTRNQGDHLL NAEADRKFEELVQTRNQGDHLLHSTRKQVE K F E T R N 0 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 8 0 2 0 1020.524 P0A6Y8 P0A6Y8 529 536 dnaK Chaperone protein DnaK yes yes 2 3.1439E-25 148.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 357630000 76005000 83597000 0 0 99941000 98086000 0 0 1146 86 1244 6529;6530;6531;6532 4867;4868;4869;4870 4867 3 76005000 85570000 0 0 120560000 108660000 0 0 FEEVKDKK ASANNAKDDDVVDAEFEEVKDKK_______ DDVVDAEFEEVKDKK_______________ E F E K K - 0 0 0 1 0 0 2 0 0 0 0 3 0 1 0 0 0 0 0 1 0 0 8 2 2 0 1021.5444 P0A6Y8 P0A6Y8 631 638 dnaK Chaperone protein DnaK yes yes 2;3 4.4369E-58 170.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2052200000 0 0 454140000 469270000 0 0 468070000 660670000 1147 86 1245 6533;6534;6535;6536;6537;6538;6539;6540 4871;4872;4873;4874;4875;4876;4877 4872 7 0 0 3858700000 3557800000 0 0 3602400000 3791500000 FEMAMELGNSEAIK TREIVDYLLLSHLPKFEMAMELGNSEAIKH KFEMAMELGNSEAIKHAVRHGLGISCLSRR K F E I K H 2 0 1 0 0 0 3 1 0 1 1 1 2 1 0 1 0 0 0 0 0 0 14 0 3 2 1568.7215 P0ACR4 P0ACR4 212 225 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 2.1494E-11 102.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76135000 10801000 13862000 0 0 28715000 22757000 0 0 1148 218 1246 6541;6542;6543;6544 4878;4879;4880;4881 4879 3 10801000 14190000 0 0 34639000 25209000 0 0 FEMEQNLR DIDNTRMTLDDFRIKFEMEQNLRQGVDADI LDDFRIKFEMEQNLRQGVDADINGLRQVLD K F E L R Q 0 1 1 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 2 0 1065.4913 CON__P35527 CON__P35527 243 250 yes yes 2 2.7945E-42 146.21 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 75289000 10828000 2600500 0 0 30859000 31002000 0 0 + 1149 15 1247;1248 6545;6546;6547;6548;6549;6550;6551;6552 4882;4883;4884;4885;4886;4887;4888;4889 4887 19 8 10828000 2661900 0 0 37225000 34343000 0 0 FENFDINVLR NSGSLTDNSKELLSRFENFDINVLRRERGV ELLSRFENFDINVLRRERGVKLELINPPEE R F E L R R 0 1 2 1 0 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 10 0 1 0 1265.6404 P0ADR8 P0ADR8 58 67 ygdH LOG family protein YgdH yes yes 2 0.016451 57.859 By matching By matching By matching By MS/MS 1 1 1 1 16185000 4838100 3995300 0 0 2585400 4766200 0 0 1150 225 1249 6553;6554;6555;6556 4890 4890 0 4838100 4089600 0 0 3118800 5279800 0 0 FENMGAQMVK KDGVSVAREIELEDKFENMGAQMVKEVASK ELEDKFENMGAQMVKEVASKANDAAGDGTT K F E V K E 1 0 1 0 0 1 1 1 0 0 0 1 2 1 0 0 0 0 0 1 0 0 10 0 1 1 1153.526 P0A6F5 P0A6F5 66 75 groL 60 kDa chaperonin yes yes 2 1.3582E-37 155.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 58571000 10179000 13016000 0 0 18846000 16530000 0 0 1151 68 1250 6557;6558;6559;6560 4891;4892;4893;4894 4893 4 10179000 13323000 0 0 22735000 18311000 0 0 FEPCGLTQLYGLK HRIMGGADVILVPSRFEPCGLTQLYGLKYG SRFEPCGLTQLYGLKYGTLPLVRRTGGLAD R F E L K Y 0 0 0 0 1 1 1 2 0 0 3 1 0 1 1 0 1 0 1 0 0 0 13 0 1 1 1524.7647 P0A6U8 P0A6U8 376 388 glgA Glycogen synthase yes yes 2 0.00095485 77.379 By MS/MS 1 7959100 0 0 0 0 0 7959100 0 0 1152 83 1251 6561 4895 4895 1 0 0 0 0 0 8816900 0 0 FEQFPAEKIE SILAAEETRRLLREEFEQFPAEKIEAVCHA LLREEFEQFPAEKIEAVCHAIAAHSFSAQI E F E I E A 1 0 0 0 0 1 3 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 10 1 2 2 1236.6027 P46144 P46144 89 98 yedJ Uncharacterized protein YedJ yes yes 2 0.01589 65.278 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 25715000 2056700 2247800 4820300 5311200 0 0 5847900 5430900 1153 371 1252 6562;6563;6564;6565;6566;6567 4896 4896 1 31601000 34279000 40958000 40267000 0 0 45006000 31167000 FESEVYILSK GQVLAKPGTIKPHTKFESEVYILSKDEGGR KPHTKFESEVYILSKDEGGRHTPFFKGYRP K F E S K D 0 0 0 0 0 0 2 0 0 1 1 1 0 1 0 2 0 0 1 1 0 0 10 0 2 0 1213.6231 P0CE48;P0CE47 P0CE48 305 314 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 0.00053218 93.111 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 115860000 20390000 25872000 0 0 36560000 33035000 0 0 1154 269 1253 6568;6569;6570;6571 4897;4898;4899;4900 4898 4 20390000 26483000 0 0 44103000 36595000 0 0 FEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQR GLLTSFCGADAPQLRFEVGTKPVTQTPQAA NVAAPAQVAQTQPQRAAPSTRSGWDNVPAP R F E Q R A 6 1 1 0 0 6 1 1 0 0 0 1 0 1 4 1 5 0 0 5 0 0 33 1 1 10 3419.7797 P03004 P03004 76 108 dnaA Chromosomal replication initiator protein DnaA yes yes 3 9.9757E-21 66.902 By MS/MS By MS/MS By MS/MS 1 1 1 34683000 10677000 9973800 0 0 14032000 0 0 0 1155 40 1254 6572;6573;6574 4901;4902;4903 4901 3 10677000 10209000 0 0 16927000 0 0 0 FEVMVPGGTLR TNSLRVAHILYHNPRFEVMVPGGTLRSHNS HNPRFEVMVPGGTLRSHNSGIIGPSAASFV R F E L R S 0 1 0 0 0 0 1 2 0 0 1 0 1 1 1 0 1 0 0 2 0 0 11 0 1 1 1204.6274 P32144 P32144 140 150 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 0.0012195 67.563 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 25961000 8359700 0 0 0 8568400 8458900 0 573770 1156 339 1255 6575;6576;6577;6578 4904;4905;4906 4904 3 8359700 0 0 0 10336000 9370600 0 3292800 FEYWAMPHKDEK GFEFEVATISGLMTKFEYWAMPHKDEKVMP MTKFEYWAMPHKDEKVMPFFEQHKSLFRNP K F E E K V 1 0 0 1 0 0 2 0 1 0 0 2 1 1 1 0 0 1 1 0 0 0 12 1 2 2 1579.7129 P31658 P31658 104 115 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 3;4 2.1254E-05 74.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 72720000 8761500 15196000 0 0 20649000 28114000 0 0 1157 335 1256 6579;6580;6581;6582;6583;6584;6585 4907;4908;4909;4910;4911;4912 4911 6 8761500 15554000 0 0 24909000 31144000 0 0 FFDAELDEESIRPI RESIIADNNIQTLRRFFDAELDEESIRPI_ RFFDAELDEESIRPI_______________ R F F P I - 1 1 0 2 0 0 3 0 0 2 1 0 0 2 1 1 0 0 0 0 0 0 14 1 3 2 1679.8043 P06710 P06710 630 643 dnaX DNA polymerase III subunit tau yes yes 2 0.00064262 83 By MS/MS 1 3789400 0 3789400 0 0 0 0 0 0 1158 51 1257 6586 4913 4913 1 0 3878900 0 0 0 0 0 0 FFDDLTR HNSPRSKSFFDGVKKFFDDLTR________ SFFDGVKKFFDDLTR_______________ K F F T R - 0 1 0 2 0 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 7 0 0 0 912.43413 P08622 P08622 370 376 dnaJ Chaperone protein DnaJ yes yes 2 1.3217E-45 170.17 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 370380000 82698000 66859000 0 0 136480000 84343000 0 0 1159 61 1258 6587;6588;6589;6590 4914;4915;4916 4916 3 82698000 68437000 0 0 164640000 93433000 0 0 FFDNDVNQVPK RIKTLTHDTRVANSRFFDNDVNQVPKYALT ANSRFFDNDVNQVPKYALTVGVGTLLDAEE R F F P K Y 0 0 2 2 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 2 0 0 11 0 0 1 1321.6303 P0A759 P0A759 173 183 nagB Glucosamine-6-phosphate deaminase yes yes 2 3.1988E-06 126.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 100810000 22779000 26028000 0 0 25192000 26811000 0 0 1160 96 1259 6591;6592;6593;6594 4917;4918;4919;4920 4920 4 22779000 26642000 0 0 30389000 29701000 0 0 FFGHGELR CCGGRHGRGGGRRQRFFGHGELRLVILDIL GGGRRQRFFGHGELRLVILDILSRDDSHGY R F F L R L 0 1 0 0 0 0 1 2 1 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1 0 961.477 P64588 P64588 57 64 yqjI Transcriptional regulator YqjI yes yes 2 2.0589E-25 150.17 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 330920000 65542000 84652000 0 0 92039000 88687000 0 0 1161 398 1260 6595;6596;6597;6598 4921;4922;4923 4922 3 65542000 86650000 0 0 111030000 98245000 0 0 FFGKEPRKDVNPDE GGQTRMPMVQKKVAEFFGKEPRKDVNPDEA EFFGKEPRKDVNPDEAVAIGAAVQGGVLTG E F F D E A 0 1 1 2 0 0 2 1 0 0 0 2 0 2 2 0 0 0 0 1 0 0 14 3 1 2 1676.8158 P0A6Y8 P0A6Y8 356 369 dnaK Chaperone protein DnaK yes yes 3 4.116E-17 106.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1136300000 106980000 88827000 174800000 197530000 34199000 33352000 220600000 280030000 1162 86 1261 6599;6600;6601;6602;6603;6604;6605;6606 4924;4925;4926;4927 4924 4 1643700000 1354600000 1485200000 1497600000 526530000 505500000 1697800000 1607000000 FFMAGYR VMDFFRENNSCSTLRFFMAGYRLEN_____ NNSCSTLRFFMAGYRLEN____________ R F F Y R L 1 1 0 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 7 0 0 1 890.41089 P64574 P64574 86 92 yghW Uncharacterized protein YghW yes yes 2 5.4428E-07 120.76 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 197420000 39800000 40438000 0 0 60912000 56273000 0 0 1163 396 1262;1263 6607;6608;6609;6610;6611;6612;6613;6614 4928;4929;4930;4931;4932;4933;4934;4935 4932 313 8 39800000 41393000 0 0 73478000 62338000 0 0 FFQVYDPAYYDSK ESDGTVINNEGRAQRFFQVYDPAYYDSKTV QRFFQVYDPAYYDSKTVMLESWRWLHSLHS R F F S K T 1 0 0 2 0 1 0 0 0 0 0 1 0 2 1 1 0 0 3 1 0 0 13 0 0 2 1641.7351 P33602 P33602 630 642 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.2593E-57 166.93 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 178140000 39855000 51569000 0 0 46958000 39753000 0 0 1164 345 1264 6615;6616;6617;6618 4936;4937;4938;4939;4940 4937 5 39855000 52786000 0 0 56646000 44038000 0 0 FFSDIGGR LSSVSHPEYIGRVAKFFSDIGGRALLMHGT YIGRVAKFFSDIGGRALLMHGTEGEVYANP K F F G R A 0 1 0 1 0 0 0 2 0 1 0 0 0 2 0 1 0 0 0 0 0 0 8 0 0 0 897.43447 P30177 P30177 214 221 ybiB Uncharacterized protein YbiB yes yes 2 1.4495E-35 128.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 184360000 59371000 38420000 0 0 31512000 55058000 0 0 1165 332 1265 6619;6620;6621;6622 4941;4942;4943;4944 4941 1 59371000 39327000 0 0 38013000 60992000 0 0 FFSSETTAAHSLVGTPYYMSPER TATGIVKLGDLGLGRFFSSETTAAHSLVGT AHSLVGTPYYMSPERIHENGYNFKSDIWSL R F F E R I 2 1 0 0 0 0 2 1 1 0 1 0 1 2 2 4 3 0 2 1 0 0 23 0 2 4 2577.1846 GST-Nek6 GST-Nek6 427 449 yes yes 3 6.6007E-09 70.799 By MS/MS By MS/MS 2 3 0 0 0 0 0 0 0 0 0 1166 23 1266;1267 6623;6624;6625;6626;6627 4945;4946;4947;4948;4949 4946 3;4;5;37;38 0 0 0 0 0 0 0 0 0 FFVASDVHPQTLDVVR MAMAKRVSKLKNANRFFVASDVHPQTLDVV FVASDVHPQTLDVVRTRAETFGFEVIVDDA R F F V R T 1 1 0 2 0 1 0 0 1 0 1 0 0 2 1 1 1 0 0 4 0 0 16 0 0 2 1828.9472 P33195 P33195 173 188 gcvP Glycine dehydrogenase (decarboxylating) yes yes 3 2.7992E-08 67.136 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33570000 12343000 10691000 0 0 0 10536000 0 0 1167 344 1268 6628;6629;6630;6631 4950;4951;4952;4953 4952 4 12343000 10943000 0 0 0 11672000 0 0 FGAMVIKAAKE ISGPISRITDDRVTEFGAMVIKAAKEVTLA RVTEFGAMVIKAAKEVTLAYGGMR______ E F G K E V 3 0 0 0 0 0 1 1 0 1 0 2 1 1 0 0 0 0 0 1 0 0 11 2 0 3 1163.6373 P16528 P16528 255 265 iclR Acetate operon repressor yes yes 2;3 0.00027263 76.228 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 4 3 3 3 3 4 314940000 13949000 11054000 61804000 48242000 19209000 25538000 54670000 80473000 1168 285 1269;1270 6632;6633;6634;6635;6636;6637;6638;6639;6640;6641;6642;6643;6644;6645;6646;6647;6648;6649;6650;6651;6652;6653;6654;6655 4954;4955;4956;4957;4958;4959;4960;4961;4962;4963;4964;4965;4966;4967;4968 4956 234 15 214320000 168570000 525140000 365750000 295740000 387060000 420750000 461820000 FGDEGEYRVPAAK ALFWCNHDQPRIVSRFGDEGEYRVPAAKML SRFGDEGEYRVPAAKMLAMVLHGMQGTPYI R F G A K M 2 1 0 1 0 0 2 2 0 0 0 1 0 1 1 0 0 0 1 1 0 0 13 1 2 3 1437.6888 P28904 P28904 333 345 treC Trehalose-6-phosphate hydrolase yes yes 3 0.0077688 35.774 By MS/MS By MS/MS By MS/MS 1 1 1 23584000 5709800 8801800 0 0 0 9072400 0 0 1169 328 1271 6656;6657;6658 4969;4970 4970 2 5709800 9009500 0 0 0 10050000 0 0 FGDEGHRE CERRPHFDAGRFAKEFGDEGHREGWCLYHL AGRFAKEFGDEGHREGWCLYHLGCKGPETY E F G R E G 0 1 0 1 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 8 1 1 0 945.39406 P69741 P69741 247 254 hybO Hydrogenase-2 small chain yes yes 2 0.0057357 84.743 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 10255000 0 0 1137100 2959600 0 0 2982500 3175600 1170 403 1272 6659;6660;6661;6662 4971;4972 4971 2 0 0 9661400 22439000 0 0 22954000 18224000 FGDPGVR QAWNKFQDEVGGKLRFGDPGVRLFETSENG DEVGGKLRFGDPGVRLFETSENGLDYFTSV R F G V R L 0 1 0 1 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 1 0 0 7 0 0 1 746.37114 P33602 P33602 778 784 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0035808 70.716 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 257430000 58593000 70838000 0 0 64155000 63849000 0 0 1171 345 1273 6663;6664;6665;6666 4973;4974 4973 2 58593000 72510000 0 0 77390000 70730000 0 0 FGDVGADTLGHIAEACAK VLDSFGIGATEDAERFGDVGADTLGHIAEA VGADTLGHIAEACAKGEADNGRKGPLNLPN R F G A K G 4 0 0 2 1 0 1 3 1 1 1 1 0 1 0 0 1 0 0 1 0 0 18 0 1 4 1830.857 P0A6K6 P0A6K6 23 40 deoB Phosphopentomutase yes yes 2;3 1.0739E-43 138.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 107560000 20230000 20763000 0 0 32624000 33947000 0 0 1172 75 1274 6667;6668;6669;6670;6671;6672;6673 4975;4976;4977;4978;4979 4975 5 20230000 21253000 0 0 39354000 37606000 0 0 FGEGTIVNMEGSGEHSR NDSGYKLGQRVRHAKFGEGTIVNMEGSGEH EGTIVNMEGSGEHSRLQVAFQGQGIKWLVA K F G S R L 0 1 1 0 0 0 3 4 1 1 0 0 1 1 0 2 1 0 0 1 0 0 17 0 3 0 1805.8003 P03018 P03018 681 697 uvrD DNA helicase II yes yes 3 0.0097653 28.869 By MS/MS By MS/MS By matching 1 1 1 13765000 5240100 5128600 0 0 0 3395700 0 0 1173 41 1275 6674;6675;6676 4980;4981 4981 2 5240100 5249700 0 0 0 3761700 0 0 FGFELAAHHDLR YAAVVTLGDPALYSRFGFELAAHHDLRCRW YSRFGFELAAHHDLRCRWPGTESAFQVHRL R F G L R C 2 1 0 1 0 0 1 1 2 0 2 0 0 2 0 0 0 0 0 0 0 0 12 0 1 2 1411.6997 P63417 P63417 120 131 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 3 0.01671 27.681 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 192170000 45804000 44926000 0 0 36794000 64647000 0 0 1174 394 1276 6677;6678;6679;6680 4982 4982 0 45804000 45986000 0 0 44385000 71614000 0 0 FGFVLPMDECLAR EALKIALGDKRGICRFGFVLPMDECLARCA CRFGFVLPMDECLARCALDISGRPHLEYKA R F G A R C 1 1 0 1 1 0 1 1 0 0 2 0 1 2 1 0 0 0 0 1 0 0 13 0 1 2 1553.7371 P06987 P06987 256 268 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 7.8656E-22 105.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 327540000 192490000 112600000 0 0 13276000 9174000 0 0 1175 55 1277;1278 6681;6682;6683;6684;6685;6686;6687;6688 4983;4984;4985;4986;4987;4988;4989 4989 71 7 192490000 115260000 0 0 16015000 10163000 0 0 FGGESVLAGSIIVR RNGRDSEAKRLGVKRFGGESVLAGSIIVRQ RFGGESVLAGSIIVRQRGTKFHAGANVGCG R F G V R Q 1 1 0 0 0 0 1 3 0 2 1 0 0 1 0 2 0 0 0 2 0 0 14 0 1 1 1403.7773 P0A7L8 P0A7L8 26 39 rpmA 50S ribosomal protein L27 yes yes 2 0.014649 38.783 By matching By MS/MS By MS/MS 1 1 1 7462700 1778400 0 0 0 2628500 3055800 0 0 1176 112 1279 6689;6690;6691 4990 4990 1 1778400 0 0 0 3170800 3385100 0 0 FGGQILDTVDIENYISVPK YSARKGIRTGLMGERFGGQILDTVDIENYI ILDTVDIENYISVPKTEGQKLAGALKVHVD R F G P K T 0 0 1 2 0 1 1 2 0 3 1 1 0 1 1 1 1 0 1 2 0 0 19 0 1 1 2107.0837 P35340 P35340 245 263 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 5.7193E-36 127.36 By MS/MS By MS/MS 1 1 70004000 0 0 0 0 35704000 34300000 0 0 1177 348 1280 6692;6693 4991 4991 1 0 0 0 0 43070000 37997000 0 0 FGGQSKNFGGEQAA LPFSRLDDGRIYQRPFGGQSKNFGGEQAAR PFGGQSKNFGGEQAARTAAAADRTGHALLH P F G A A R 2 0 1 0 0 2 1 4 0 0 0 1 0 2 0 1 0 0 0 0 0 0 14 1 1 1 1396.6371 P0AC41 P0AC41 119 132 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 3.4367E-17 105.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27182000 2051800 1753400 0 0 15216000 8161400 0 0 1178 203 1281 6694;6695;6696;6697 4992 4992 1 12386000 10494000 0 0 21663000 11634000 0 0 FGLEQVLTQSSWQPPQPR PDGNPLSADRHEVIRFGLEQVLTQSSWQPP EQVLTQSSWQPPQPRRQPAKLRHFTVETEV R F G P R R 0 1 0 0 0 4 1 1 0 0 2 0 0 1 3 2 1 1 0 1 0 0 18 0 1 3 2097.0643 P27249 P27249 772 789 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 1.6348E-52 185.59 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 202150000 74290000 43542000 0 0 35406000 48915000 0 0 1179 320 1282 6698;6699;6700;6701;6702;6703;6704 4993;4994;4995;4996;4997 4995 5 74290000 44570000 0 0 42710000 54187000 0 0 FGLLEMSR VRQDRARIQISHISRFGLLEMSRQRLSPSL QISHISRFGLLEMSRQRLSPSLGESSHHVC R F G S R Q 0 1 0 0 0 0 1 1 0 0 2 0 1 1 0 1 0 0 0 0 0 0 8 0 1 0 951.48479 P21513 P21513 382 389 rne Ribonuclease E yes yes 2 4.3384E-08 124.83 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44915000 13763000 12155000 0 0 8790700 10207000 0 0 1180 297 1283 6705;6706;6707;6708 4998;4999;5000;5001 5000 4 13763000 12442000 0 0 10604000 11307000 0 0 FGQGEAAPVVAPAPAPAPEVQTK TRPDNGMLSLGVSYRFGQGEAAPVVAPAPA VVAPAPAPAPEVQTKHFTLKSDVLFNFNKA R F G T K H 6 0 0 0 0 2 2 2 0 0 0 1 0 1 5 0 1 0 0 3 0 0 23 0 2 11 2231.1586 P0A910 P0A910 191 213 ompA Outer membrane protein A yes yes 2 8.9826E-08 67.605 By MS/MS By MS/MS By MS/MS 1 1 1 22342000 7578600 0 0 0 6584100 8179500 0 0 1181 158 1284 6709;6710;6711 5002;5003;5004 5003 3 7578600 0 0 0 7942400 9061100 0 0 FGQGRMTLTE RNVMGVPAVFVNGKEFGQGRMTLTEIVAKI VNGKEFGQGRMTLTEIVAKIDTGAEKRAAE E F G T E I 0 1 0 0 0 1 1 2 0 0 1 0 1 1 0 0 2 0 0 0 0 0 10 1 0 0 1138.5441 P35340 P35340 181 190 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 2.5559E-75 182.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 4 1 2 2764300000 204430000 267650000 592420000 631590000 148560000 139550000 230920000 549200000 1182 348 1285;1286 6712;6713;6714;6715;6716;6717;6718;6719;6720;6721;6722;6723;6724;6725;6726;6727;6728;6729 5005;5006;5007;5008;5009;5010;5011;5012;5013;5014;5015 5013 280 11 3141000000 4081700000 5033700000 4788400000 2234900000 2073100000 1777200000 3151800000 FGRDANDTGSTE ______________________________ VSEFGRDANDTGSTEVQVALLTAQINHLQG E F G T E V 1 1 1 2 0 0 1 2 0 0 0 0 0 1 0 1 2 0 0 0 0 0 12 1 0 1 1268.5269 P0ADZ4 P0ADZ4 15 26 rpsO 30S ribosomal protein S15 yes yes 2 8.5488E-53 160.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 1 2915900000 209440000 255120000 239660000 366360000 281360000 310150000 527930000 725870000 1183 231 1287 6730;6731;6732;6733;6734;6735;6736;6737;6738 5016;5017;5018;5019;5020;5021;5022;5023 5019 7 3218000000 3890700000 2036300000 2777600000 4331800000 4700800000 4063100000 4165600000 FGRDANDTGSTEVQVALLTAQINHLQGHFAE ______________________________ LLTAQINHLQGHFAEHKKDHHSRRGLLRMV E F G A E H 4 1 2 2 0 3 2 3 2 1 3 0 0 2 0 1 3 0 0 2 0 0 31 1 1 4 3338.628 P0ADZ4 P0ADZ4 15 45 rpsO 30S ribosomal protein S15 yes yes 4 0.0010622 44.452 By MS/MS By matching 1 1 57095000 0 0 0 0 22143000 34952000 0 0 1184 231 1288 6739;6740 5024 5024 1 0 0 0 0 340910000 529750000 0 0 FGRPPVLNEEQK RTHSGIVRARGAGKRFGRPPVLNEEQKQAV GKRFGRPPVLNEEQKQAVFERIKSGVSISA R F G Q K Q 0 1 1 0 0 1 2 1 0 0 1 1 0 1 2 0 0 0 0 1 0 0 12 1 2 2 1412.7412 P77170;P0ADI0 P77170 146 157 pinQ;pinR Putative DNA-invertase from lambdoid prophage Qin;Putative DNA-invertase from lambdoid prophage Rac yes no 3 2.6608E-19 117.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52626000 13428000 15621000 0 0 11128000 12449000 0 0 1185 222 1289 6741;6742;6743;6744 5025;5026;5027;5028 5026 4 13428000 15989000 0 0 13424000 13791000 0 0 FGSDSGIGQLAAAINR ASLRDSLCLLQKSYRFGSDSGIGQLAAAIN GSDSGIGQLAAAINRGDKTAVKTVFQQDFT R F G N R G 3 1 1 1 0 1 0 3 0 2 1 0 0 1 0 2 0 0 0 0 0 0 16 0 0 3 1575.8005 P04993 P04993 361 376 recD RecBCD enzyme subunit RecD yes yes 2 1.5139E-82 175.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29815000 7301300 7800600 0 0 4423200 10290000 0 0 1186 46 1290 6745;6746;6747;6748 5029;5030;5031;5032 5032 4 7301300 7984700 0 0 5335800 11399000 0 0 FGSELLAK RRRVIGQRKILPDPKFGSELLAKFVNILMV KILPDPKFGSELLAKFVNILMVDGKKSTAE K F G A K F 1 0 0 0 0 0 1 1 0 0 2 1 0 1 0 1 0 0 0 0 0 0 8 0 1 1 863.47527 P02359 P02359 18 25 rpsG 30S ribosomal protein S7 yes yes 2 0.0024745 81.784 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71030000 14646000 15995000 0 0 18767000 21622000 0 0 1187 36 1291 6749;6750;6751;6752 5033;5034;5035;5036 5036 4 14646000 16372000 0 0 22639000 23952000 0 0 FGVEDGSVEGLR EERELPELTAEFIKRFGVEDGSVEGLRAEV IKRFGVEDGSVEGLRAEVRKNMERELKSAI R F G L R A 0 1 0 1 0 0 2 3 0 0 1 0 0 1 0 1 0 0 0 2 0 0 12 0 2 0 1263.6095 P0A850 P0A850 256 267 tig Trigger factor yes yes 2 1.2993E-15 98.943 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 40723000 0 13043000 0 0 14450000 13231000 0 0 1188 137 1292 6753;6754;6755;6756 5037;5038;5039 5037 3 0 13350000 0 0 17431000 14657000 0 0 FGYGYVNLK YNGTVNHYFLCDRGRFGYGYVNLKDRPRQP LCDRGRFGYGYVNLKDRPRQPVQRRGDDFI R F G L K D 0 0 1 0 0 0 0 2 0 0 1 1 0 1 0 0 0 0 2 1 0 0 9 0 0 0 1059.5389 P33602 P33602 268 276 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 1.4403E-05 106.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 223020000 520810 78876000 0 0 76602000 67017000 0 0 1189 345 1293 6757;6758;6759;6760;6761;6762;6763 5040;5041;5042;5043;5044 5040 5 3143900 80738000 0 0 94355000 76138000 0 0 FHAGANVGCGR SVLAGSIIVRQRGTKFHAGANVGCGRDHTL RGTKFHAGANVGCGRDHTLFAKADGKVKFE K F H G R D 2 1 1 0 1 0 0 3 1 0 0 0 0 1 0 0 0 0 0 1 0 0 11 0 0 2 1144.5196 P0A7L8 P0A7L8 45 55 rpmA 50S ribosomal protein L27 yes yes 3 5.4454E-07 67.414 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16358000 0 7422400 0 0 4852700 4082800 0 0 1190 112 1294 6764;6765;6766;6767 5045;5046;5047;5048 5045 4 0 7597600 0 0 5853800 4522800 0 0 FHWKPLAGK TFRLINAEGKATFVRFHWKPLAGKASLVWD KATFVRFHWKPLAGKASLVWDEAQKLTGRD R F H G K A 1 0 0 0 0 0 0 1 1 0 1 2 0 1 1 0 0 1 0 0 0 0 9 1 0 2 1082.6025 P21179 P21179 291 299 katE Catalase HPII yes yes 2;3 0.00076529 82.305 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 136640000 30372000 35723000 0 0 29698000 40842000 0 0 1191 293 1295 6768;6769;6770;6771;6772;6773;6774;6775 5049;5050;5051;5052;5053;5054;5055;5056 5049 8 30372000 36566000 0 0 35825000 45244000 0 0 FIAQQLGVSR ______________________________ MRLDKFIAQQLGVSRAIAGREIRGNRVTVD K F I S R A 1 1 0 0 0 2 0 1 0 1 1 0 0 1 0 1 0 0 0 1 0 0 10 0 0 1 1117.6244 P0AA43 P0AA43 6 15 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 3.6139E-58 166.16 By MS/MS By MS/MS By MS/MS 2 1 1 1147700000 0 607820000 0 0 0 539850000 0 0 1192 183 1296 6776;6777;6778;6779 5057;5058;5059;5060;5061 5058 5 0 622170000 0 0 0 598030000 0 0 FIDLFAGIGGIR LLPKPPAHHPHYAFRFIDLFAGIGGIRRGF AFRFIDLFAGIGGIRRGFESIGGQCVFTSE R F I I R R 1 1 0 1 0 0 0 3 0 3 1 0 0 2 0 0 0 0 0 0 0 0 12 0 0 1 1277.7132 P0AED9 P0AED9 89 100 dcm DNA-cytosine methyltransferase yes yes 2 1.3446E-06 87.308 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 136620000 24700000 16288000 0 0 52532000 43101000 0 0 1193 235 1297 6780;6781;6782;6783 5062;5063;5064;5065 5064 4 24700000 16672000 0 0 63369000 47747000 0 0 FIEENALKAA LFTTLMGDAVEPRRAFIEENALKAANIDI_ EPRRAFIEENALKAANIDI___________ A F I A A N 3 0 1 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 10 1 2 2 1104.5815 P0AES6 P0AES6 791 800 gyrB DNA gyrase subunit B yes yes 2 0.0056305 70.919 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26872000 3860000 3012900 0 0 11451000 8548100 0 0 1194 239 1298 6784;6785;6786;6787 5066;5067 5067 2 23301000 18032000 0 0 16303000 12185000 0 0 FIEIYRA ______________________________ ______________________________ P F I R A L 1 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 7 1 1 0 910.49125 P23908 P23908 8 14 argE Acetylornithine deacetylase yes yes 2 0.0057049 72.021 By matching By matching By MS/MS By MS/MS 1 1 1 1 32631000 3054500 2882200 0 0 10600000 16094000 0 0 1195 308 1299 6788;6789;6790;6791 5068 5068 1 18439000 17250000 0 0 15090000 22942000 0 0 FIEQDPEGQYGLEAAFR DVPYLLSIQLDSFQKFIEQDPEGQYGLEAA EQDPEGQYGLEAAFRSVFPIQSYSGNSELQ K F I F R S 2 1 0 1 0 2 3 2 0 1 1 0 0 2 1 0 0 0 1 0 0 0 17 0 3 3 1968.9218 P0A8V2 P0A8V2 38 54 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 4.0354E-34 100.22 By MS/MS 1 0 0 0 0 0 0 0 0 0 1196 154 1300 6792 5069 5069 1 0 0 0 0 0 0 0 0 FIFLEEGDIAEITR FIASDQLALLPVTRRFIFLEEGDIAEITRR RFIFLEEGDIAEITRRSVNIFDKTGAEVKR R F I T R R 1 1 0 1 0 0 3 1 0 3 1 0 0 2 0 0 1 0 0 0 0 0 14 0 3 1 1651.8457 P17169 P17169 204 217 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 2.6741E-64 171.62 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 708410000 52249000 96202000 0 0 301710000 258250000 0 0 1197 288 1301 6793;6794;6795;6796;6797;6798 5070;5071;5072 5071 3 79378000 98472000 0 0 364130000 286080000 0 0 FIGRLPVVATLNE QVEPEDLIKFGLIPEFIGRLPVVATLNELS PEFIGRLPVVATLNELSEEALIQILKEPKN E F I N E L 1 1 1 0 0 0 1 1 0 1 2 0 0 1 1 0 1 0 0 2 0 0 13 1 0 2 1427.8136 P0A6H1 P0A6H1 304 316 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 2 0.0027193 52.579 By matching By matching By MS/MS 1 1 1 2205400 0 0 0 650920 0 0 692680 861810 1198 70 1302 6799;6800;6801 5073 5073 1 0 0 0 4935000 0 0 5331000 4945800 FIKRFGVEDGSVE LKKVEERELPELTAEFIKRFGVEDGSVEGL AEFIKRFGVEDGSVEGLRAEVRKNMERELK E F I V E G 0 1 0 1 0 0 2 2 0 1 0 1 0 2 0 1 0 0 0 2 0 0 13 2 1 0 1481.7514 P0A850 P0A850 252 264 tig Trigger factor yes yes 2;3 4.2043E-08 61.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 2 2 186740000 4563700 7903900 30421000 43215000 2199700 0 41290000 57151000 1199 137 1303 6802;6803;6804;6805;6806;6807;6808;6809;6810;6811;6812 5074;5075;5076;5077;5078;5079 5078 6 70121000 120540000 258490000 327640000 33867000 0 317780000 327980000 FINELLPVIDSLDR TELDIEKAHKFALEKFINELLPVIDSLDRA KFINELLPVIDSLDRALEVADKANPDMSAM K F I D R A 0 1 1 2 0 0 1 0 0 2 3 0 0 1 1 1 0 0 0 1 0 0 14 0 1 1 1642.893 P09372 P09372 91 104 grpE Protein GrpE yes yes 2 2.1182E-13 89.403 By MS/MS By MS/MS By MS/MS 1 1 1 85520000 24637000 21976000 0 0 0 38907000 0 0 1200 62 1304 6813;6814;6815 5080;5081;5082 5080 0 24637000 22495000 0 0 0 43100000 0 0 FIQQNPGQLK TTYRFNSRIGEVANRFIQQNPGQLKKPLNS EVANRFIQQNPGQLKKPLNSLTNGDKKAVT R F I L K K 0 0 1 0 0 3 0 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 10 0 0 1 1171.635 P15038 P15038 515 524 helD Helicase IV yes yes 2 8.9443E-06 126.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 109900000 29892000 28159000 0 0 25884000 25970000 0 0 1201 281 1305 6816;6817;6818;6819 5083;5084;5085;5086;5087;5088 5088 6 29892000 28823000 0 0 31224000 28769000 0 0 FITDVER IEQGDHVIMFLTDKKFITDVERLFQPSPFF IMFLTDKKFITDVERLFQPSPFFL______ K F I E R L 0 1 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 7 0 1 0 878.44978 P0AGI8 P0AGI8 443 449 trkA Trk system potassium uptake protein TrkA yes yes 2 0.017229 49.358 By MS/MS By MS/MS By matching By matching 1 1 1 1 15454000 6081000 6840600 0 0 1722500 810060 0 0 1202 264 1306 6820;6821;6822;6823 5089 5089 1 6081000 7002100 0 0 2077900 897360 0 0 FKDDVNEVR DNVVIYEGELESLRRFKDDVNEVRNGMECG LESLRRFKDDVNEVRNGMECGIGVKNYNDV R F K V R N 0 1 1 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 9 1 1 0 1120.5513 P0A705;P0A705-3;P0A705-2 P0A705 848 856 infB Translation initiation factor IF-2 yes no 2;3 0.0013727 55.549 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 59676000 16440000 13503000 0 0 14603000 15129000 0 0 1203 90 1307 6824;6825;6826;6827;6828 5090;5091;5092;5093;5094 5092 5 16440000 13821000 0 0 17616000 16760000 0 0 FKDEGPILFIHTGGAPALFAYHPHV GKAMAGLIDGISQKRFKDEGPILFIHTGGA HTGGAPALFAYHPHV_______________ R F K H V - 3 0 0 1 0 0 1 3 3 2 2 1 0 3 3 0 1 0 1 1 0 0 25 1 1 6 2733.4067 P76316 P76316 304 328 dcyD D-cysteine desulfhydrase yes yes 4 0.018345 15.316 By matching By MS/MS 1 1 7309500 0 1635900 0 0 5673600 0 0 0 1204 422 1308 6829;6830 5095 5095 1 0 1674500 0 0 6844100 0 0 0 FKEAHPEIPTK RPGADYNWSLKLLERFKEAHPEIPTKSGLM LLERFKEAHPEIPTKSGLMVGLGETNEEII R F K T K S 1 0 0 0 0 0 2 0 1 1 0 2 0 1 2 0 1 0 0 0 0 0 11 1 2 3 1295.6874 P60716 P60716 221 231 lipA Lipoyl synthase yes yes 3 1.3829E-08 118.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 56369000 16314000 14819000 0 0 11692000 13544000 0 0 1205 382 1309 6831;6832;6833;6834 5096;5097;5098;5099 5096 4 16314000 15169000 0 0 14104000 15003000 0 0 FKELFDTYSK PLSKMMKPGMGSYDRFKELFDTYSKQAGKE GSYDRFKELFDTYSKQAGKEQYLIPYFISA R F K S K Q 0 0 0 1 0 0 1 0 0 0 1 2 0 2 0 1 1 0 1 0 0 0 10 1 1 0 1276.634 Q46861 Q46861 546 555 ygiQ UPF0313 protein YgiQ yes yes 3 0.0043821 47.559 By MS/MS By matching By MS/MS By matching 1 1 1 1 46492000 21663000 9593700 0 0 7411900 7823600 0 0 1206 441 1310 6835;6836;6837;6838 5100 5100 1 21663000 9820100 0 0 8941000 8666800 0 0 FKKDQGIDLRNDPLAMQRLKE GEDFDSRLINYLVEEFKKDQGIDLRNDPLA IDLRNDPLAMQRLKEAAEKAKIELSSAQQT E F K K E A 1 2 1 3 0 2 1 1 0 1 3 3 1 1 1 0 0 0 0 0 0 0 21 5 0 2 2514.3377 P0A6Y8 P0A6Y8 244 264 dnaK Chaperone protein DnaK yes yes 4;5 1.1593E-57 131.59 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 2 4 4 2 3 1958500000 160460000 172240000 347940000 185390000 205960000 189620000 170870000 525990000 1207 86 1311;1312 6839;6840;6841;6842;6843;6844;6845;6846;6847;6848;6849;6850;6851;6852;6853;6854;6855;6856;6857;6858;6859;6860;6861;6862;6863;6864;6865 5101;5102;5103;5104;5105;5106;5107;5108;5109;5110;5111;5112;5113;5114;5115;5116;5117;5118;5119;5120;5121;5122;5123;5124;5125;5126 5111 91 25 2465400000 2626700000 2956400000 1405600000 3170900000 2874000000 1315100000 3018600000 FKNISPHLQR HHYYEIVWDEEQTHKFKNISPHLQRIKAFK EQTHKFKNISPHLQRIKAFKTLG_______ K F K Q R I 0 1 1 0 0 1 0 0 1 1 1 1 0 1 1 1 0 0 0 0 0 0 10 1 0 1 1238.6884 P0A8E1 P0A8E1 163 172 ycfP UPF0227 protein YcfP yes yes 3 0.00012513 65.627 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19643000 10676000 0 0 0 5240600 3725600 0 0 1208 143 1313 6866;6867;6868;6869 5127;5128 5128 2 10676000 0 0 0 6321700 4127100 0 0 FLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLK KDVFMGVDELQVGMRFLAETDQGPVPVEIT VVVDGNHMLAGQNLKFNVEVVAIREATEEE R F L L K F 3 0 2 4 0 2 3 3 2 1 3 1 1 1 2 0 2 0 0 6 0 0 36 0 3 5 3856.8942 P0A9K9 P0A9K9 96 131 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 4 0 245.37 By MS/MS By MS/MS By MS/MS By MS/MS 3 5 8 7 2750300000 210000000 522140000 0 0 1370300000 647790000 0 0 1209 169 1314;1315 6870;6871;6872;6873;6874;6875;6876;6877;6878;6879;6880;6881;6882;6883;6884;6885;6886;6887;6888;6889;6890;6891;6892 5129;5130;5131;5132;5133;5134;5135;5136;5137;5138;5139 5137 159 11 215790000 630990000 0 0 4988700000 2145600000 0 0 FLDAGHYQPLRDA RDPGDSAEMMQARRAFLDAGHYQPLRDAIV RAFLDAGHYQPLRDAIVAQLRERLDDKATA A F L D A I 2 1 0 2 0 1 0 1 1 0 2 0 0 1 1 0 0 0 1 0 0 0 13 1 0 2 1501.7314 P36999 P36999 61 73 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 8.0262E-09 94.297 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 87960000 4731400 4215400 0 0 36019000 42995000 0 0 1210 352 1316 6893;6894;6895;6896;6897;6898 5140;5141;5142;5143 5143 4 28561000 25229000 0 0 51279000 61289000 0 0 FLDSTADYPQQPGVVLIK RENLRLNGIDESSVKFLDSTADYPQQPGVV STADYPQQPGVVLIKVPKTLALLEQQLRAL K F L I K V 1 0 0 2 0 2 0 1 0 1 2 1 0 1 2 1 1 0 1 2 0 0 18 0 0 3 1990.0411 P42596 P42596 96 113 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 2.358E-209 227.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 523550000 148080000 110570000 0 0 125600000 139300000 0 0 1211 366 1317 6899;6900;6901;6902 5144;5145;5146;5147 5147 4 148080000 113180000 0 0 151510000 154310000 0 0 FLDVTGRIA ARRLQVTSEKVGNLAFLDVTGRIAQTLLNL KVGNLAFLDVTGRIAQTLLNLAKQPDAMTH A F L I A Q 1 1 0 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 9 1 0 0 990.54983 P0ACJ8 P0ACJ8 137 145 crp cAMP-activated global transcriptional regulator CRP yes yes 2 0.016287 61.999 By MS/MS By MS/MS By MS/MS 1 1 1 31626000 5472800 0 0 0 7733900 18420000 0 0 1212 213 1318 6903;6904;6905 5148;5149;5150 5148 3 33037000 0 0 0 11011000 26257000 0 0 FLDYCDPANVPR RIHHRQKHLSNALRRFLDYCDPANVPR___ LRRFLDYCDPANVPR_______________ R F L P R - 1 1 1 2 1 0 0 0 0 0 1 0 0 1 2 0 0 0 1 1 0 0 12 0 0 3 1465.666 P0ACR4 P0ACR4 282 293 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 2.4886E-26 138.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61516000 17430000 12364000 0 0 14501000 17221000 0 0 1213 218 1319 6906;6907;6908;6909 5151;5152;5153;5154 5151 4 17430000 12655000 0 0 17493000 19077000 0 0 FLEQQNK KTLNNKFASFIDKVRFLEQQNKVLDTKWTL ASFIDKVRFLEQQNKVLDTKWTLLQEQGTK R F L N K V 0 0 1 0 0 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 0 1 0 905.46068 CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__Q8VED5;CON__P13647 CON__P13647 188 194 no no 2 7.7651E-05 114.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 88344000 22128000 19809000 0 0 26346000 20061000 0 0 + 1214 13;5 1320 6910;6911;6912;6913 5155;5156;5157;5158 5158 4 22128000 20276000 0 0 31781000 22224000 0 0 FLEQQNQVLETK KVLNNKFASFIDKVRFLEQQNQVLETKWEL KVRFLEQQNQVLETKWELLQQLDLNNCKNN R F L T K W 0 0 1 0 0 3 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 2 0 1475.762 CON__Q32MB2;CON__Q7RTS7;CON__Q3SY84 CON__Q32MB2 152 163 no no 2 4.226E-84 182.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 151890000 21481000 14400000 0 0 51572000 64442000 0 0 + 1215 18 1321 6914;6915;6916;6917;6918;6919;6920 5159;5160;5161;5162;5163;5164;5165 5161 7 21481000 14739000 0 0 62211000 71387000 0 0 FLEQQNQVLQTK KSLNNQFASFIDKVRFLEQQNQVLQTKWEL KVRFLEQQNQVLQTKWELLQQVDTSTRTHN R F L T K W 0 0 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1 0 1474.778 CON__P04264;CON__P35908v2;CON__P35908;CON__Q7Z794 CON__P04264 200 211 no no 2 0 284.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2715700000 481360000 365200000 0 0 870500000 998630000 0 0 + 1216 9;16;21 1322 6921;6922;6923;6924 5166;5167;5168;5169;5170 5169 5 481360000 373820000 0 0 1050100000 1106300000 0 0 FLKAGGVFTDE GSLEEALNELDLDREFLKAGGVFTDEAIDA LDREFLKAGGVFTDEAIDAYIALRREEDDR E F L D E A 1 0 0 1 0 0 1 2 0 0 1 1 0 2 0 0 1 0 0 1 0 0 11 1 0 1 1182.5921 P0A9C5 P0A9C5 428 438 glnA Glutamine synthetase yes yes 2 0.00088319 66.621 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 37973000 3359500 5130900 11459000 10516000 4472400 3035000 0 0 1217 164 1323 6925;6926;6927;6928;6929;6930 5171;5172;5173 5171 3 51617000 78247000 97366000 79725000 68857000 46001000 0 0 FLKVLYDAE VELQSKVDLLNQEIEFLKVLYDAEISQIHQ LNQEIEFLKVLYDAEISQIHQSVTDTNVIL E F L A E I 1 0 0 1 0 0 1 0 0 0 2 1 0 1 0 0 0 0 1 1 0 0 9 1 0 1 1096.5805 CON__P35908v2;CON__P35908 CON__P35908v2 312 320 yes no 2 0.0076911 67.981 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 35640000 6458700 4701900 2316800 2066000 5793700 3341000 5107700 5854600 + 1218 16 1324 6931;6932;6933;6934;6935;6936;6937;6938 5174 5174 1 6458700 4812900 19685000 15663000 6988900 3701100 39310000 33599000 FLKYDEAPSNVAQAVIE QLRSLTKGRASYTMEFLKYDEAPSNVAQAV KYDEAPSNVAQAVIEARGK___________ E F L I E A 3 0 1 1 0 1 2 0 0 1 1 1 0 1 1 1 0 0 1 2 0 0 17 1 1 4 1892.952 P0A6M8 P0A6M8 684 700 fusA Elongation factor G yes yes 2 0.0085064 33.685 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 13818000 1148300 1759800 0 963920 2275600 2868400 1390000 3412100 1219 76 1325 6939;6940;6941;6942;6943;6944;6945 5175 5175 1 17644000 26837000 0 7308000 35034000 43474000 10698000 19581000 FLLATTDPQK NALLKTLEEPPEHVKFLLATTDPQKLPVTI PEHVKFLLATTDPQKLPVTILSRCLQFHLK K F L Q K L 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 2 0 0 0 0 0 10 0 0 2 1132.6128 P06710 P06710 152 161 dnaX DNA polymerase III subunit tau yes yes 2 0.0012881 69.598 By MS/MS By MS/MS By MS/MS By matching 2 1 2 1 30691000 10304000 8460400 0 0 10178000 1748900 0 0 1220 51 1326 6946;6947;6948;6949;6950;6951 5176;5177;5178 5177 3 24476000 8660000 0 0 39387000 26507000 0 0 FLLATTDPQKLPVTILSR NALLKTLEEPPEHVKFLLATTDPQKLPVTI ATTDPQKLPVTILSRCLQFHLKALDVEQIR K F L S R C 1 1 0 1 0 1 0 0 0 1 4 1 0 1 2 1 3 0 0 1 0 0 18 1 0 3 2012.167 P06710 P06710 152 169 dnaX DNA polymerase III subunit tau yes yes 3 8.987E-31 121.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 125320000 42203000 42519000 0 0 16805000 23794000 0 0 1221 51 1327 6952;6953;6954;6955 5179;5180;5181;5182 5181 4 42203000 43522000 0 0 20272000 26358000 0 0 FLNALRRERVP ______________________________ LQDPFLNALRRERVPVSIYLVNGIKLQGQI P F L V P V 1 3 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 11 3 1 1 1369.7943 P0A6X3 P0A6X3 11 21 hfq RNA-binding protein Hfq yes yes 3 0.0093097 53.683 By MS/MS By MS/MS By MS/MS 1 1 1 55342000 0 1723000 0 0 33664000 19955000 0 0 1222 84 1328 6956;6957;6958 5183 5183 1 0 10312000 0 0 47927000 28446000 0 0 FLNDFPGAETIR SIYGWRGAQVENIQRFLNDFPGAETIRLEQ IQRFLNDFPGAETIRLEQNYRSTSNILSAA R F L I R L 1 1 1 1 0 0 1 1 0 1 1 0 0 2 1 0 1 0 0 0 0 0 12 0 1 2 1378.6881 P03018 P03018 267 278 uvrD DNA helicase II yes yes 2 0.0034268 43.512 By MS/MS 1 0 0 0 0 0 0 0 0 0 1223 41 1329 6959 5184 5184 1 0 0 0 0 0 0 0 0 FLPNLHSHR TGNNRSHALNATKRRFLPNLHSHRFWVESE NATKRRFLPNLHSHRFWVESEKRFVTLRVS R F L H R F 0 1 1 0 0 0 0 0 2 0 2 0 0 1 1 1 0 0 0 0 0 0 9 0 0 1 1119.5938 P0A7M2 P0A7M2 29 37 rpmB 50S ribosomal protein L28 yes yes 2;3 0.00031326 76.1 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 204640000 55485000 51270000 0 0 48462000 49421000 0 0 1224 113 1330 6960;6961;6962;6963;6964;6965;6966;6967 5185;5186;5187;5188;5189;5190 5185 6 55485000 52480000 0 0 58460000 54747000 0 0 FLPNPHWDPK KHGIPIDADYVFDVRFLPNPHWDPKLRPMT VFDVRFLPNPHWDPKLRPMTGLDKPVAAFL R F L P K L 0 0 1 1 0 0 0 0 1 0 1 1 0 1 3 0 0 1 0 0 0 0 10 0 0 3 1249.6244 P0A894 P0A894 185 194 rapZ RNase adapter protein RapZ yes yes 3 0.0094201 34.755 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 93693000 33307000 21947000 0 0 20515000 17924000 0 0 1225 141 1331 6968;6969;6970;6971 5191;5192;5193;5194 5191 4 33307000 22465000 0 0 24747000 19856000 0 0 FLRAVRHHN SLGGLFKSSQNTRHEFLRAVRHHN______ QNTRHEFLRAVRHHN_______________ E F L H N - 1 2 1 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 1 0 0 9 2 0 1 1148.6315 P0A6T5 P0A6T5 214 222 folE GTP cyclohydrolase 1 yes yes 3 0.0089462 61.962 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 104620000 1328700 1427100 14400000 16412000 824460 896950 26451000 42875000 1226 81 1332 6972;6973;6974;6975;6976;6977;6978;6979 5195 5195 1 20415000 21763000 122360000 124430000 12693000 13595000 203570000 246050000 FLSALAGENDPEAK DHFGLNIVHVPAEDRFLSALAGENDPEAKR RFLSALAGENDPEAKRKIIGRVFVEVFDEE R F L A K R 3 0 1 1 0 0 2 1 0 0 2 1 0 1 1 1 0 0 0 0 0 0 14 0 2 4 1460.7147 P04079 P04079 294 307 guaA GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0009779 78.342 By MS/MS By MS/MS By MS/MS 1 1 1 19869000 6223400 0 0 0 7571600 6073800 0 0 1227 44 1333 6980;6981;6982 5196;5197;5198 5198 3 6223400 0 0 0 9133700 6728500 0 0 FLSAPEAVEYGLVDSILTHR GQSLEQIERDTERDRFLSAPEAVEYGLVDS EAVEYGLVDSILTHRN______________ R F L H R N 2 1 0 1 0 0 2 1 1 1 3 0 0 1 1 2 1 0 1 2 0 0 20 0 2 3 2216.1477 P0A6G7 P0A6G7 187 206 clpP ATP-dependent Clp protease proteolytic subunit yes yes 3 0.00018691 43.598 By matching By matching By MS/MS By MS/MS 1 1 1 1 68876000 9730900 10454000 0 0 28066000 20626000 0 0 1228 69 1334 6983;6984;6985;6986 5199;5200 5200 2 9730900 10701000 0 0 33856000 22849000 0 0 FLSELTAAEGLER IESGRATFNSEEKKRFLSELTAAEGLERYL KRFLSELTAAEGLERYLGAKFPGAKRFSLE R F L E R Y 2 1 0 0 0 0 3 1 0 0 3 0 0 1 0 1 1 0 0 0 0 0 13 0 3 2 1434.7355 P0AFG3 P0AFG3 203 215 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 8.6698E-36 166.93 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 302580000 91987000 71492000 0 0 67809000 71291000 0 0 1229 246 1335 6987;6988;6989;6990 5201;5202;5203;5204 5202 4 91987000 73179000 0 0 81799000 78974000 0 0 FLSGKKAAAAAAAAAAAATGTE ______________________________ AAAAAAAAAAATGTEAGPGTAGGSENGSEV E F L T E A 12 0 0 0 0 0 1 2 0 0 1 2 0 1 0 1 2 0 0 0 0 0 22 2 0 12 1919.0112 LSD1-FL-His LSD1-FL-His 3 24 yes yes 2;3 1.154E-214 282.73 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 5 4 4 3 3 6 4 12648000000 732880000 816470000 824260000 1263700000 1510100000 1079700000 1955400000 4465500000 1230 24 1336 6991;6992;6993;6994;6995;6996;6997;6998;6999;7000;7001;7002;7003;7004;7005;7006;7007;7008;7009;7010;7011;7012;7013;7014;7015;7016;7017;7018;7019;7020;7021;7022;7023;7024 5205;5206;5207;5208;5209;5210;5211;5212;5213;5214;5215;5216;5217;5218;5219;5220;5221;5222;5223;5224;5225;5226;5227;5228;5229;5230;5231;5232;5233;5234;5235;5236;5237;5238;5239;5240;5241;5242;5243;5244;5245;5246 5213 42 11255000000 12451000000 7003600000 9581100000 23249000000 16364000000 15050000000 25627000000 FLSGKKAAAAAAAAAAAATGTEAGPGTAGGSE ______________________________ ATGTEAGPGTAGGSENGSEVAAQPAGLSGP E F L S E N 14 0 0 0 0 0 2 6 0 0 1 2 0 1 1 2 3 0 0 0 0 0 32 2 1 15 2703.3464 LSD1-FL-His LSD1-FL-His 3 34 yes yes 3;4 1.1304E-06 67.367 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 1 243510000 14333000 20119000 6513700 10563000 37881000 29505000 34364000 90231000 1231 24 1337 7025;7026;7027;7028;7029;7030;7031;7032;7033;7034;7035 5247;5248;5249;5250;5251;5252;5253 5253 7 220220000 306820000 55346000 80080000 583220000 447190000 264480000 517820000 FLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSE ______________________________ EAGPGTAGGSENGSEVAAQPAGLSGPAEVG E F L S E V 14 0 1 0 0 0 3 7 0 0 1 2 0 1 1 3 3 0 0 0 0 0 36 2 2 15 3090.4854 LSD1-FL-His LSD1-FL-His 3 38 yes yes 3 0.00046847 36.722 By MS/MS 1 776100000 0 0 0 0 0 0 0 776100000 1232 24 1338 7036 5254 5254 1 0 0 0 0 0 0 0 4453900000 FLSQLANQYASCLKGD PLGTNIKLGKTSYSEFLSQLANQYASCLKG LSQLANQYASCLKGD_______________ E F L G D - 2 0 1 1 1 2 0 1 0 0 3 1 0 1 0 2 0 0 1 0 0 0 16 1 0 2 1813.8669 P39172 P39172 295 310 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 4.6682E-22 96.591 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 16614000 878700 969340 1391100 879480 3854600 4895300 809550 2936100 1233 361 1339 7037;7038;7039;7040;7041;7042;7043;7044 5255;5256;5257 5257 3 13501000 14783000 11820000 6667800 59346000 74195000 6230500 16850000 FLVAQSGVLITQVR RHLGHPVKLEIEPGRFLVAQSGVLITQVRS RFLVAQSGVLITQVRSVKQMGSRHFVLVDA R F L V R S 1 1 0 0 0 2 0 1 0 1 2 0 0 1 0 1 1 0 0 3 0 0 14 0 0 1 1529.893 P00861 P00861 272 285 lysA Diaminopimelate decarboxylase yes yes 2 0.0018746 58.676 By MS/MS By matching 1 1 3578600 0 0 0 0 2193500 1385100 0 0 1234 28 1340 7045;7046 5258 5258 1 0 0 0 0 2646000 1534400 0 0 FLVKSKHRDLTALCKE KEASEVKPPRDITAEFLVKSKHRDLTALCK LVKSKHRDLTALCKEYDELAETQGKLEEKL E F L K E Y 1 1 0 1 1 0 1 0 1 0 3 3 0 1 0 1 1 0 0 1 0 0 16 4 0 1 1944.0615 LSD1-FL-His LSD1-FL-His 480 495 yes yes 3;4 1.2849E-24 105.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 597910000 115750000 119540000 18970000 23551000 110980000 147020000 24453000 37643000 1235 24 1341 7047;7048;7049;7050;7051;7052;7053;7054;7055 5259;5260;5261;5262;5263;5264;5265;5266 5261 8 1778500000 1822900000 161180000 178550000 1708600000 2228300000 188200000 216030000 FLVKSKHRDLTALCKEYDE KEASEVKPPRDITAEFLVKSKHRDLTALCK SKHRDLTALCKEYDELAETQGKLEEKLQEL E F L D E L 1 1 0 2 1 0 2 0 1 0 3 3 0 1 0 1 1 0 1 1 0 0 19 4 1 1 2351.1944 LSD1-FL-His LSD1-FL-His 480 498 yes yes 4 5.0862E-26 97.284 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 220070000 40475000 39208000 0 0 73488000 61323000 5574700 0 1236 24 1342 7056;7057;7058;7059;7060 5267;5268;5269;5270 5267 4 621890000 597930000 0 0 1131400000 929450000 42905000 0 FLWIGCSDSR DPGFFEKLAQAQKPRFLWIGCSDSRVPAER AQKPRFLWIGCSDSRVPAERLTGLEPGELF R F L S R V 0 1 0 1 1 0 0 1 0 1 1 0 0 1 0 2 0 1 0 0 0 0 10 0 0 0 1239.5706 P61517 P61517 37 46 can Carbonic anhydrase 2 yes yes 2 8.1836E-15 130.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 283630000 69465000 62804000 0 0 66013000 85350000 0 0 1237 386 1343 7061;7062;7063;7064 5271;5272;5273;5274 5272 4 69465000 64286000 0 0 79631000 94548000 0 0 FMAKLSAE RGKQLAQHNAHFLVEFMAKLSAELAGENEG NAHFLVEFMAKLSAELAGENEGVDHKVIDA E F M A E L 2 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 8 1 0 2 895.44734 P46144 P46144 204 211 yedJ Uncharacterized protein YedJ yes yes 2 0.022774 48.561 By matching By MS/MS By MS/MS 1 1 1 19307000 0 0 0 2742500 0 0 7115700 9449000 1238 371 1344 7065;7066;7067 5275 5275 1 0 0 0 20793000 0 0 54764000 54226000 FMIDIDQAQR EQDIRSRTLRNIQRRFMIDIDQAQRVAKVA NIQRRFMIDIDQAQRVAKVAANFFDQVENE R F M Q R V 1 1 0 2 0 2 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 10 0 0 1 1235.5969 P25552 P25552 320 329 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 7.7896E-39 162.25 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 189700000 37703000 44347000 0 0 54758000 52896000 0 0 1239 316 1345;1346 7068;7069;7070;7071;7072;7073;7074;7075 5276;5277;5278;5279;5280;5281;5282 5277 262 7 37703000 45393000 0 0 66055000 58690000 0 0 FMKEPQEVR FSATMPEAIRRITRRFMKEPQEVRIQSSVT RRITRRFMKEPQEVRIQSSVTTRPDISQSY R F M V R I 0 1 0 0 0 1 2 0 0 0 0 1 1 1 1 0 0 0 0 1 0 0 9 1 2 1 1162.5805 P0A9P6 P0A9P6 201 209 deaD ATP-dependent RNA helicase DeaD yes yes 3 0.0052306 44.203 By MS/MS By MS/MS By MS/MS 1 1 2 12979000 0 7538200 0 0 5162700 278440 0 0 1240 173 1347 7076;7077;7078;7079 5283;5284 5284 2 0 7716100 0 0 6227800 396920 0 0 FMVNVEGR GFDAATEARYLGYVRFMVNVEGRYTHFDAG RYLGYVRFMVNVEGRYTHFDAGTHGFNAQT R F M G R Y 0 1 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 2 0 0 8 0 1 0 950.46439 P0A8W8 P0A8W8 109 116 yfbU UPF0304 protein YfbU yes yes 2 0.0048945 61.999 By MS/MS 1 4312500 0 0 0 0 4312500 0 0 0 1241 155 1348 7080 5285 5285 1 0 0 0 0 5202200 0 0 0 FNAPVEVLHSGLNDSER EIGLTPQTIARFRERFNAPVEVLHSGLNDS APVEVLHSGLNDSERLSAWLKAKNGEAAIV R F N E R L 1 1 2 1 0 0 2 1 1 0 2 0 0 1 1 2 0 0 0 2 0 0 17 0 2 2 1882.9173 P17888 P17888 269 285 priA Primosomal protein N yes yes 3 0.00014886 58.246 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 69164000 13282000 18671000 0 0 14737000 15188000 7285900 0 1242 290 1349 7081;7082;7083;7084;7085 5286;5287;5288;5289 5289 3 13282000 19112000 0 0 17777000 16825000 56074000 0 FNDAVIR EAPQEVIDELETTFRFNDAVIRSMVMRTKH DELETTFRFNDAVIRSMVMRTKHAVTEASP R F N I R S 1 1 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 0 1 833.43955 P02358 P02358 80 86 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 2 0.0015291 100.74 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27784000 6948200 8255700 0 0 5730600 6849700 0 0 1243 35 1350 7086;7087;7088;7089 5290;5291;5292;5293 5290 4 6948200 8450500 0 0 6912800 7587900 0 0 FNGAVFINE KNEVIGIHWGGVPNEFNGAVFINENVRNFL GGVPNEFNGAVFINENVRNFLKQNIEDIHF E F N N E N 1 0 2 0 0 0 1 1 0 1 0 0 0 2 0 0 0 0 0 1 0 0 9 0 0 1 1009.4869 CON__P0C1U8 CON__P0C1U8 260 268 yes yes 2 0.020455 56.011 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60290000 0 0 18016000 13237000 0 0 20005000 9032500 + 1244 11 1351 7090;7091;7092;7093 5294;5295 5294 2 0 0 153070000 100360000 0 0 153960000 51836000 FNHSHPSEVEKRE GLPEKRLRGKTLMYEFNHSHPSEVEKRESL YEFNHSHPSEVEKRESLIKEMFATVGENAW E F N R E S 0 1 1 0 0 0 3 0 2 0 0 1 0 1 1 2 0 0 0 1 0 0 13 2 2 1 1594.7488 B8LFD8;P07464 B8LFD8 36 48 lacA Galactoside O-acetyltransferase yes no 4 0.0010337 37.55 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 35472000 869120 844040 7002800 8539900 893840 606990 5077000 11639000 1245 2 1352 7094;7095;7096;7097;7098;7099;7100;7101 5296 5296 1 13354000 12872000 59501000 64746000 13761000 9199800 39073000 66794000 FNIDADKVNPR RGEIDKKVVADAIAKFNIDADKVNPRLA__ AIAKFNIDADKVNPRLA_____________ K F N P R L 1 1 2 2 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 1 0 0 11 1 0 2 1287.6571 P0AFG8 P0AFG8 875 885 aceE Pyruvate dehydrogenase E1 component yes yes 3 0.0069097 39.657 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 26028000 8886700 0 0 0 6115800 7447900 0 3577600 1246 248 1353 7102;7103;7104;7105 5297;5298;5299 5298 3 8886700 0 0 0 7377500 8250600 0 20531000 FNIPGSK RDVATGGRVDRFNKRFNIPGSK________ RVDRFNKRFNIPGSK_______________ R F N S K - 0 0 1 0 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 7 0 0 1 761.40719 P0A7M9 P0A7M9 64 70 rpmE 50S ribosomal protein L31 yes yes 2 0.0025235 87.284 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 107660000 20918000 19608000 9148400 8005800 30527000 19449000 0 0 1247 115 1354 7106;7107;7108;7109;7110;7111 5300;5301;5302;5303 5302 4 20918000 20071000 77733000 60696000 36825000 21545000 0 0 FNLMLETK DKDIVKVFTKRISKKFNLMLETKVTAVEAK TKRISKKFNLMLETKVTAVEAKEDGIYVTM K F N T K V 0 0 1 0 0 0 1 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 8 0 1 0 994.51575 P0A9P0 P0A9P0 230 237 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.012101 51.63 By MS/MS By MS/MS 1 1 10267000 6730100 0 0 0 3537300 0 0 0 1248 172 1355 7112;7113 5304;5305 5304 2 6730100 0 0 0 4267100 0 0 0 FNMLASIGQGAGGLLLAGHTDTVPFDDGR GFNVEVQPVPGTRNKFNMLASIGQGAGGLL LLAGHTDTVPFDDGRWTRDPFTLTEHDGKL K F N G R W 3 1 1 3 0 1 0 6 1 1 4 0 1 2 1 1 2 0 0 1 0 0 29 0 0 4 2929.4392 P23908 P23908 62 90 argE Acetylornithine deacetylase yes yes 3 0.0026413 25.955 By MS/MS By matching 1 1 68128000 0 0 0 0 43843000 24285000 0 0 1249 308 1356 7114;7115 5306 5306 1 0 0 0 0 52888000 26902000 0 0 FNQFHPTALYHPQARNFLLTE IAMAWRAGCRVANLEFNQFHPTALYHPQAR TALYHPQARNFLLTEALRGEGAYLKRPDGT E F N T E A 2 1 2 0 0 2 1 0 2 0 3 0 0 3 2 0 2 0 1 0 0 0 21 1 0 4 2543.271 P10902 P10902 240 260 nadB L-aspartate oxidase yes yes 4 0.0049777 21.006 By MS/MS By MS/MS 1 1 20529000 0 0 0 0 13891000 6637600 0 0 1250 274 1357 7116;7117 5307;5308 5307 2 0 0 0 0 213870000 100600000 0 0 FNSSLSEDGQR FIMKAVAAALEQMPRFNSSLSEDGQRLTLK QMPRFNSSLSEDGQRLTLKKYINIGVAVDT R F N Q R L 0 1 1 1 0 1 1 1 0 0 1 0 0 1 0 3 0 0 0 0 0 0 11 0 1 0 1238.5527 P06959 P06959 477 487 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.00012253 86.898 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11817000 2181600 1897800 0 0 4039100 3697900 0 0 1251 53 1358 7118;7119;7120;7121 5309;5310;5311 5311 3 2181600 1942600 0 0 4872400 4096500 0 0 FNTQRVECLE RERLKNARLDDTSSEFNTQRVECLELDNLM DTSSEFNTQRVECLELDNLMETAYATAVSA E F N L E L 0 1 1 0 1 1 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 10 1 1 0 1294.5976 P0AC41 P0AC41 506 515 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.00088214 74.162 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 37605000 0 4233800 10217000 12260000 2632400 1814900 6446900 0 1252 203 1359 7122;7123;7124;7125;7126;7127;7128 5312;5313;5314;5315;5316;5317 5316 6 0 64566000 86813000 92950000 40528000 2587100 49617000 0 FNVEVVAIR VVVDGNHMLAGQNLKFNVEVVAIREATEEE AGQNLKFNVEVVAIREATEEELAHGHVHGA K F N I R E 1 1 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 3 0 0 9 0 1 1 1045.592 P0A9K9 P0A9K9 132 140 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 1;2 1.7398E-182 221.33 By MS/MS By MS/MS By MS/MS By MS/MS 25 22 11 17 4810400000 265270000 238630000 0 0 4091000000 215560000 0 0 1253 169 1360 7129;7130;7131;7132;7133;7134;7135;7136;7137;7138;7139;7140;7141;7142;7143;7144;7145;7146;7147;7148;7149;7150;7151;7152;7153;7154;7155;7156;7157;7158;7159;7160;7161;7162;7163;7164;7165;7166;7167;7168;7169;7170;7171;7172;7173;7174;7175;7176;7177;7178;7179;7180;7181;7182;7183;7184;7185;7186;7187;7188;7189;7190;7191;7192;7193;7194;7195;7196;7197;7198;7199;7200;7201;7202;7203 5318;5319;5320;5321;5322;5323;5324;5325;5326;5327;5328;5329;5330;5331;5332;5333;5334;5335;5336;5337;5338;5339;5340;5341;5342;5343;5344;5345;5346;5347;5348;5349;5350;5351;5352;5353;5354;5355;5356;5357;5358;5359;5360;5361;5362;5363;5364;5365;5366;5367;5368;5369;5370;5371;5372;5373;5374;5375;5376;5377;5378;5379;5380;5381;5382;5383;5384;5385;5386 5318 68 354030000 278140000 0 0 5013000000 259950000 0 0 FNYNSVMQVPRVE HDYYKDEVVKKLMTEFNYNSVMQVPRVEKI TEFNYNSVMQVPRVEKITLNMGVGEAIADK E F N V E K 0 1 2 0 0 1 1 0 0 0 0 0 1 1 1 1 0 0 1 3 0 0 13 1 0 1 1581.761 P62399 P62399 20 32 rplE 50S ribosomal protein L5 yes yes 2 3.9866E-14 93.821 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 2 2 34983000 1848300 1882800 4900200 3200900 4229300 3077400 8106200 7737400 1254 388 1361;1362 7204;7205;7206;7207;7208;7209;7210;7211;7212;7213;7214 5387;5388;5389;5390;5391;5392;5393;5394;5395;5396 5394 310 10 28399000 28714000 41636000 24268000 65115000 46643000 62387000 44404000 FPEDLDGDGR GLRLDVVNLISKDPRFPEDLDGDGRRFYTD SKDPRFPEDLDGDGRRFYTDGPRAHEFLHE R F P G R R 0 1 0 3 0 0 1 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1 1 1119.4833 P28904 P28904 211 220 treC Trehalose-6-phosphate hydrolase yes yes 2 0.012581 47.187 By matching By MS/MS 1 1 5583200 0 0 0 0 1799500 3783700 0 0 1255 328 1363 7215;7216 5397 5397 1 0 0 0 0 2170700 4191500 0 0 FPFLLVDR HTLQIEEILELLPHRFPFLLVDRVLDFEEG LELLPHRFPFLLVDRVLDFEEGRFLRAVKN R F P D R V 0 1 0 1 0 0 0 0 0 0 2 0 0 2 1 0 0 0 0 1 0 0 8 0 0 1 1005.5648 P0A6Q6 P0A6Q6 21 28 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ yes yes 2 0.0022235 85.064 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 113600000 37460000 42081000 565260 0 13102000 20388000 0 0 1256 80 1364 7217;7218;7219;7220;7221 5398;5399;5400;5401 5398 4 37460000 43074000 4802900 0 15805000 22585000 0 0 FQDEEVQR PQNTLFAIKRLIGRRFQDEEVQRDVSIMPF KRLIGRRFQDEEVQRDVSIMPFKIIAADNG R F Q Q R D 0 1 0 1 0 2 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 8 0 2 0 1049.4778 P0A6Y8 P0A6Y8 77 84 dnaK Chaperone protein DnaK yes yes 2 1.3734E-45 166.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1354500000 422140000 334470000 0 0 282340000 315570000 0 0 1257 86 1365 7222;7223;7224;7225 5402;5403;5404;5405 5402 4 422140000 342360000 0 0 340590000 349580000 0 0 FQDEVGGK FAWAPGWNSPQAWNKFQDEVGGKLRFGDPG SPQAWNKFQDEVGGKLRFGDPGVRLFETSE K F Q G K L 0 0 0 1 0 1 1 2 0 0 0 1 0 1 0 0 0 0 0 1 0 0 8 0 1 0 878.4134 P33602 P33602 768 775 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 4.3384E-08 124.83 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 262900000 75002000 77595000 0 0 63992000 46314000 0 0 1258 345 1366 7226;7227;7228;7229 5406;5407;5408;5409 5407 4 75002000 79427000 0 0 77194000 51306000 0 0 FQIVSESPR NAIRDGIASAILPGRFQIVSESPRVIFDVA AILPGRFQIVSESPRVIFDVAHNPHAAEYL R F Q P R V 0 1 0 0 0 1 1 0 0 1 0 0 0 1 1 2 0 0 0 1 0 0 9 0 1 1 1061.5506 P08192 P08192 290 298 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 2 2.1115E-06 101.72 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 43105000 0 11644000 16521000 14940000 0 0 0 0 1259 59 1367 7230;7231;7232;7233;7234;7235 5410;5411;5412;5413 5410 4 0 11919000 140380000 113260000 0 0 0 0 FQLTYDDR RDDVLQAVFDKGTSKFQLTYDDRALQFFRT FDKGTSKFQLTYDDRALQFFRTFVLATEQS K F Q D R A 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 8 0 0 0 1056.4876 P75990 P75990 117 124 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 6.6513E-08 124.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26242000 7572900 6443200 0 0 4938000 7287500 0 0 1260 414 1368 7236;7237;7238;7239 5414;5415;5416;5417 5417 4 7572900 6595300 0 0 5956800 8072900 0 0 FQPLLNTE LIQEQADASHYFSDEFQPLLNTEGPVKYVR SHYFSDEFQPLLNTEGPVKYVRPDVSHFEA E F Q T E G 0 0 1 0 0 1 1 0 0 0 2 0 0 1 1 0 1 0 0 0 0 0 8 0 0 1 960.49165 P0A8B2 P0A8B2 62 69 yfcN UPF0115 protein YfcN yes yes 1 0.018573 40.103 By MS/MS 1 471430 0 0 0 0 0 0 0 471430 1261 142 1369 7240 5418 5418 0 0 0 0 0 0 0 0 2705500 FQPLLNTEGPVKYVRPDVSHFE LIQEQADASHYFSDEFQPLLNTEGPVKYVR EGPVKYVRPDVSHFEAKKLRRGDYSPELFL E F Q F E A 0 1 1 1 0 1 2 1 1 0 2 1 0 2 3 1 1 0 1 3 0 0 22 2 1 3 2571.3122 P0A8B2 P0A8B2 62 83 yfcN UPF0115 protein YfcN yes yes 4 0.00094092 28.178 By MS/MS By MS/MS 1 1 12314000 0 0 0 0 6956700 5356900 0 0 1262 142 1370 7241;7242 5419;5420 5420 2 0 0 0 0 107110000 81192000 0 0 FQPQDGK TSENGLDYFTSVPARFQPQDGKWRIAPYYH YFTSVPARFQPQDGKWRIAPYYHLFGSDEL R F Q G K W 0 0 0 1 0 2 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 7 0 0 1 818.39227 P33602 P33602 803 809 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 1.0001E-06 88.029 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 74546000 25337000 31658000 0 0 11312000 6239400 0 0 1263 345 1371 7243;7244;7245;7246 5421;5422;5423;5424 5422 0 25337000 32405000 0 0 13646000 6911800 0 0 FQQVLSDIGE DSSLETAIDHDNYLEFQQVLSDIGEALEAR DNYLEFQQVLSDIGEALEARFVLEDKLILL E F Q G E A 0 0 0 1 0 2 1 1 0 1 1 0 0 1 0 1 0 0 0 1 0 0 10 0 0 0 1134.5557 P0AFX4 P0AFX4 123 132 rsd Regulator of sigma D yes yes 2 0.019155 43.246 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 16845000 2136700 1377900 2868900 2794700 1472900 0 2633200 3560600 1264 251 1372 7247;7248;7249;7250;7251;7252;7253 5425;5426 5426 2 32830000 21013000 24377000 21188000 22677000 0 20266000 20434000 FQQVLSDIGEALE DSSLETAIDHDNYLEFQQVLSDIGEALEAR LEFQQVLSDIGEALEARFVLEDKLILLVLD E F Q L E A 1 0 0 1 0 2 2 1 0 1 2 0 0 1 0 1 0 0 0 1 0 0 13 0 1 1 1447.7195 P0AFX4 P0AFX4 123 135 rsd Regulator of sigma D yes yes 2 3.6215E-53 159.79 By matching By matching By MS/MS 1 1 1 37535000 0 0 3424900 1875800 32234000 0 0 0 1265 251 1373 7254;7255;7256 5427 5427 1 0 0 29101000 14222000 496280000 0 0 0 FQSEEQQQTEDELQDK SSEESITRINKKIEKFQSEEQQQTEDELQD QSEEQQQTEDELQDKIHPFAQTQSLVYPFP K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 4 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2 0 266.71 By MS/MS By MS/MS By MS/MS By MS/MS 5 5 7 6 28870000 5711700 4667000 0 0 10752000 7739900 0 0 + 1266 8 1374;1375 7257;7258;7259;7260;7261;7262;7263;7264;7265;7266;7267;7268;7269;7270;7271;7272;7273;7274;7275;7276;7277;7278;7279 5428;5429;5430;5431;5432;5433 5432 2 1 16601000 15582000 0 0 14161000 9530400 0 0 FREDDPSAHLASPK LSAVRRLFQYLYREKFREDDPSAHLASPKL KFREDDPSAHLASPKLPQRLPKDLSEAQVE K F R P K L 2 1 0 2 0 0 1 0 1 0 1 1 0 1 2 2 0 0 0 0 0 0 14 1 1 4 1568.7583 P0A8P8 P0A8P8 91 104 xerD Tyrosine recombinase XerD yes yes 2;3;4 2.8842E-39 150.06 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 783100000 207920000 209920000 0 0 169430000 195830000 0 0 1267 151 1376 7280;7281;7282;7283;7284;7285;7286;7287;7288;7289;7290;7291 5434;5435;5436;5437;5438;5439;5440;5441;5442;5443;5444;5445;5446 5439 13 207920000 214870000 0 0 204380000 216940000 0 0 FRIPVSDTQAYR ECARLMGFEAPGEAKFRIPVSDTQAYRQFG EAKFRIPVSDTQAYRQFGNSVVVPVFAAVA K F R Y R Q 1 2 0 1 0 1 0 0 0 1 0 0 0 1 1 1 1 0 1 1 0 0 12 1 0 2 1451.7521 P0AED9 P0AED9 421 432 dcm DNA-cytosine methyltransferase yes yes 2;3 8.0766E-14 119.39 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 189060000 58013000 58574000 0 0 31487000 40989000 0 0 1268 235 1377 7292;7293;7294;7295;7296;7297;7298;7299 5447;5448;5449;5450;5451 5447 5 58013000 59957000 0 0 37983000 45406000 0 0 FRQLIQVNPDILMR RAKTACEVAEISYKKFRQLIQVNPDILMRL KFRQLIQVNPDILMRLSAQMARRLQVTSEK K F R M R L 0 2 1 1 0 2 0 0 0 2 2 0 1 1 1 0 0 0 0 1 0 0 14 1 0 1 1741.9661 P0ACJ8 P0ACJ8 103 116 crp cAMP-activated global transcriptional regulator CRP yes yes 3 0.00013025 66.285 By MS/MS By MS/MS By matching By matching 1 1 1 1 20059000 9116200 8236400 0 0 983820 1722600 0 0 1269 213 1378 7300;7301;7302;7303 5452;5453 5452 2 9116200 8430800 0 0 1186800 1908200 0 0 FSAASQPAAPVTK HIGESASDILRRMLKFSAASQPAAPVTKEV LKFSAASQPAAPVTKEVRVASPAIVEAKPV K F S T K E 4 0 0 0 0 1 0 0 0 0 0 1 0 1 2 2 1 0 0 1 0 0 13 0 0 6 1273.6667 P0AFY8 P0AFY8 35 47 seqA Negative modulator of initiation of replication yes yes 2 6.0531E-14 118.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 73084000 21408000 16891000 0 0 21841000 12945000 0 0 1270 252 1379 7304;7305;7306;7307;7308 5454;5455 5455 2 21408000 17290000 0 0 41670000 14340000 0 0 FSDDSIE HHDHLICLDCGKVIEFSDDSIEARQREIAA LDCGKVIEFSDDSIEARQREIAAKHGIRLT E F S I E A 0 0 0 2 0 0 1 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 7 0 0 0 811.32358 P0A9A9 P0A9A9 102 108 fur Ferric uptake regulation protein yes yes 1 7.6394E-05 110.54 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2117800000 0 0 494730000 467000000 0 0 549050000 606980000 1271 162 1380 7309;7310;7311;7312 5456;5457 5456 1 0 0 4203600000 3540600000 0 0 4225600000 3483300000 FSDDSIEARQRE HHDHLICLDCGKVIEFSDDSIEARQREIAA VIEFSDDSIEARQREIAAKHGIRLTNHSLY E F S R E I 1 2 0 2 0 1 2 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 12 2 1 1 1451.6641 P0A9A9 P0A9A9 102 113 fur Ferric uptake regulation protein yes yes 2;3 1.766E-97 203.94 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 2 2 4292600000 22680000 7661100 794550000 843870000 266280000 254780000 872850000 1229900000 1272 162 1381 7313;7314;7315;7316;7317;7318;7319;7320;7321;7322;7323;7324;7325;7326 5458;5459;5460;5461;5462;5463;5464;5465;5466;5467;5468 5462 11 348480000 116830000 6751200000 6397800000 4099600000 3861500000 6717600000 7058400000 FSDGEVSVQINENVR ANRLYTSLGDAAVGRFSDGEVSVQINENVR FSDGEVSVQINENVRGGDIFIIQSTCAPTN R F S V R G 0 1 2 1 0 1 2 1 0 1 0 0 0 1 0 2 0 0 0 3 0 0 15 0 2 0 1691.8115 P0A717 P0A717 35 49 prs Ribose-phosphate pyrophosphokinase yes yes 2 9.8021E-52 161.99 By MS/MS By MS/MS 1 1 15886000 0 0 0 0 6514200 9371800 0 0 1273 91 1382 7327;7328 5469;5470 5470 2 0 0 0 0 7858000 10382000 0 0 FSFEDAK YQGLNPGGALVLSEKFSFEDAKVGELLFNM GALVLSEKFSFEDAKVGELLFNMHHDFKRA K F S A K V 1 0 0 1 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 0 0 0 7 0 1 1 842.38103 P76290 P76290 166 172 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2 0.0062718 60.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16490000 5923900 3837300 0 0 3021400 3707900 0 0 1274 421 1383 7329;7330;7331;7332 5471;5472;5473;5474 5471 4 5923900 3927800 0 0 3644700 4107500 0 0 FSHNVVLAN RANDIALKCKYCEKEFSHNVVLAN______ KYCEKEFSHNVVLAN_______________ E F S A N - 1 0 2 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 2 0 0 9 0 0 1 999.51378 P0A7F3 P0A7F3 145 153 pyrI Aspartate carbamoyltransferase regulatory chain yes yes 2 0.01156 64.265 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 86798000 3844600 3842700 17903000 20201000 5021100 4545700 12077000 19363000 1275 103 1384 7333;7334;7335;7336;7337;7338;7339;7340 5475;5476 5476 2 59071000 58602000 152120000 153160000 77304000 68896000 92951000 111120000 FSIALLNQAVER IWIEDQSTNCGENARFSIALLNQAVERVHT NARFSIALLNQAVERVHTAIVVQDPTMQRR R F S E R V 2 1 1 0 0 1 1 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 12 0 1 2 1359.751 P34209 P34209 132 143 ydcF Protein YdcF yes yes 2 2.0131E-118 201.75 By MS/MS By MS/MS By MS/MS 1 1 1 72518000 0 23110000 0 0 19506000 29902000 0 0 1276 347 1385 7341;7342;7343 5477;5478;5479 5477 3 0 23656000 0 0 23530000 33124000 0 0 FSLEGGDALIPMLK GLERYLGAKFPGAKRFSLEGGDALIPMLKE RFSLEGGDALIPMLKEMIRHAGNSGTREVV R F S L K E 1 0 0 1 0 0 1 2 0 1 3 1 1 1 1 1 0 0 0 0 0 0 14 0 1 2 1489.7851 P0AFG3 P0AFG3 227 240 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 1.0778E-11 113.47 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 476630000 157530000 110750000 0 0 84901000 123450000 0 0 1277 246 1386;1387 7344;7345;7346;7347;7348;7349;7350;7351 5480;5481;5482;5483;5484;5485 5480 219 6 157530000 113370000 0 0 102420000 136760000 0 0 FSNSSSSNEFSK QSCSNGQHEYGSCGRFSNSSSSNEFSKCDQ CGRFSNSSSSNEFSKCDQYGSGSSQSTSFE R F S S K C 0 0 2 0 0 0 1 0 0 0 0 1 0 2 0 6 0 0 0 0 0 0 12 0 1 0 1319.563 CON__Q5D862 CON__Q5D862 404 415 yes yes 2 7.6817E-19 127.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19254000 2354000 4573000 0 0 6923300 5403400 0 0 + 1278 19 1388 7352;7353;7354;7355 5486;5487;5488;5489 5488 4 2354000 4680900 0 0 8351600 5985700 0 0 FSSCGGGGGSFGAGGGFGSR TTSSSTRRSGGGGGRFSSCGGGGGSFGAGG GGGGSFGAGGGFGSRSLVNLGGSKSISISV R F S S R S 1 1 0 0 1 0 0 10 0 0 0 0 0 3 0 4 0 0 0 0 0 0 20 0 0 1 1764.7274 CON__P04264 CON__P04264 46 65 yes yes 2 3.236E-37 133.66 By MS/MS By MS/MS By MS/MS 1 1 1 46965000 0 8938500 0 0 21622000 16405000 0 0 + 1279 9 1389 7356;7357;7358 5490;5491;5492 5492 3 0 9149500 0 0 26082000 18173000 0 0 FSSSSGYGGGSSR YSRFSSSGGRGGGGRFSSSSGYGGGSSRVC GRFSSSSGYGGGSSRVCGRGGGGSFGYSYG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 0 13 0 0 0 1234.5214 CON__P35527 CON__P35527 47 59 yes yes 2 6.4813E-46 154.24 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 590140000 117290000 129390000 0 0 190050000 153410000 0 0 + 1280 15 1390 7359;7360;7361;7362;7363;7364 5493;5494;5495 5493 3 145830000 132440000 0 0 229250000 169950000 0 0 FSTVQGGAGSADTVR DFLSDPNKITPVFVRFSTVQGGAGSADTVR FSTVQGGAGSADTVRDIRGFATKFYTEEGI R F S V R D 2 1 0 1 0 1 0 3 0 0 0 0 0 1 0 2 2 0 0 2 0 0 15 0 0 2 1451.7005 P21179 P21179 166 180 katE Catalase HPII yes yes 2 1.1971E-50 184.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 297680000 87005000 57647000 0 0 70674000 82351000 0 0 1281 293 1391 7365;7366;7367;7368 5496;5497;5498;5499;5500;5501 5496 6 87005000 59008000 0 0 85255000 91226000 0 0 FSVEAPK LSELVRQDRLIVVEKFSVEAPKTKLLAQKL DRLIVVEKFSVEAPKTKLLAQKLKDMALED K F S P K T 1 0 0 0 0 0 1 0 0 0 0 1 0 1 1 1 0 0 0 1 0 0 7 0 1 2 776.40685 P60723 P60723 124 130 rplD 50S ribosomal protein L4 yes yes 2 0.0026345 83.614 By MS/MS By MS/MS By MS/MS 1 2 2 161930000 0 37532000 0 0 61126000 63269000 0 0 1282 383 1392 7369;7370;7371;7372;7373 5502;5503;5504 5504 3 0 38418000 0 0 74008000 70607000 0 0 FTALGPYIR MTLPSGHPKSRLIKKFTALGPYIREGKCKD SRLIKKFTALGPYIREGKCKDNRFFFDCLA K F T I R E 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 1 0 1 0 0 0 9 0 0 2 1036.5706 P24251 P24251 16 24 crl Sigma factor-binding protein Crl yes yes 2 0.0021331 71.342 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27590000 5606400 7477000 0 0 6991100 7515800 0 0 1283 312 1393 7374;7375;7376;7377 5505;5506;5507;5508 5506 4 5606400 7653500 0 0 8433400 8325800 0 0 FTATSSLLR IDLRVDYLRPGRGERFTATSSLLRAGNKVA PGRGERFTATSSLLRAGNKVAVARVELHNE R F T L R A 1 1 0 0 0 0 0 0 0 0 2 0 0 1 0 2 2 0 0 0 0 0 9 0 0 1 994.54475 P0ADP2 P0ADP2 117 125 yigI Uncharacterized protein YigI yes yes 2 0.0023676 69.825 By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 35280000 8503500 9356700 0 0 8083100 9336800 0 0 1284 224 1394 7378;7379;7380;7381;7382 5509;5510;5511 5511 3 8503500 9577500 0 0 10128000 10343000 0 0 FTDEDEQGLR QIIGVLDIDSTVFGRFTDEDEQGLRQLVAQ TVFGRFTDEDEQGLRQLVAQLEKVLATTDY R F T L R Q 0 1 0 2 0 1 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 10 0 2 0 1208.5309 P76270 P76270 132 141 msrC Free methionine-R-sulfoxide reductase yes yes 2 0.0014856 68.735 By MS/MS By MS/MS By MS/MS 1 1 1 8214500 2580500 0 0 0 2954400 2679600 0 0 1285 420 1395 7383;7384;7385 5512;5513;5514 5513 3 2580500 0 0 0 3563900 2968400 0 0 FTDMIDGQTITR PHTMPVITEVSGFVRFTDMIDGQTITRQTD FVRFTDMIDGQTITRQTDELTGLSSLVVLD R F T T R Q 0 1 0 2 0 1 0 1 0 2 0 0 1 1 0 0 3 0 0 0 0 0 12 0 0 0 1396.6657 P0A8T7 P0A8T7 1037 1048 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.1417E-09 112.13 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34969000 9792300 9265900 0 0 7491400 8419200 0 0 1286 153 1396 7386;7387;7388;7389 5515;5516;5517;5518 5515 4 9792300 9484600 0 0 9036900 9326600 0 0 FTGANTLEVEGENGK MAKGRKVKVVNGLGKFTGANTLEVEGENGK FTGANTLEVEGENGKTVINFDNAIIAAGSR K F T G K T 1 0 2 0 0 0 3 3 0 0 1 1 0 1 0 0 2 0 0 1 0 0 15 0 3 1 1564.7369 P0A9P0 P0A9P0 119 133 lpdA Dihydrolipoyl dehydrogenase yes yes 2 2.8533E-11 90.146 By MS/MS By matching By matching By MS/MS 1 1 1 1 18693000 3975800 5249000 0 0 3553000 5915300 0 0 1287 172 1397 7390;7391;7392;7393 5519;5520 5520 2 3975800 5372900 0 0 4286000 6552900 0 0 FTGSHLTVRNGYSCVPVALAE STLSLKHWDQDDDFEFTGSHLTVRNGYSCV TVRNGYSCVPVALAEGLDIKLNTAVRQVRY E F T A E G 2 1 1 0 1 0 1 2 1 0 2 0 0 1 1 2 2 0 1 3 0 0 21 1 0 3 2277.1212 LSD1-FL-His LSD1-FL-His 562 582 yes yes 3 1.1935E-12 76.061 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 119610000 20196000 20666000 0 0 34562000 25594000 7169400 11420000 1288 24 1398 7394;7395;7396;7397;7398;7399 5521;5522;5523;5524;5525;5526 5524 6 310300000 315170000 0 0 532110000 387910000 55178000 65539000 FTGVDRK DATLVLSVGDEVEAKFTGVDRKNRAISLSV VGDEVEAKFTGVDRKNRAISLSVRAKDEAD K F T R K N 0 1 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 7 1 0 0 821.43955 P0AG67 P0AG67 505 511 rpsA 30S ribosomal protein S1 yes yes 2 0.020299 47.743 By MS/MS By MS/MS By MS/MS 1 1 1 7196000 5186000 0 0 0 1273500 736540 0 0 1289 261 1399 7400;7401;7402 5527 5527 1 5186000 0 0 0 1536200 815920 0 0 FTILRPQSLFGPHDK EEVINMLSQANPQTRFTILRPQSLFGPHDK FTILRPQSLFGPHDKVFIPRLAHMMHHYGS R F T D K V 0 1 0 1 0 1 0 1 1 1 2 1 0 2 2 1 1 0 0 0 0 0 15 1 0 2 1754.9468 P75821 P75821 163 177 ybjS Uncharacterized protein YbjS yes yes 3 0.00069253 55.186 By MS/MS By MS/MS By MS/MS 1 1 1 39040000 10976000 0 0 0 8764800 19298000 0 0 1290 408 1400 7403;7404;7405 5528;5529;5530 5530 3 10976000 0 0 0 10573000 21378000 0 0 FTLAALASTGR QFPNGIEPHGTDALRFTLAALASTGRDINW DALRFTLAALASTGRDINWDMKRLEGYRNF R F T G R D 3 1 0 0 0 0 0 1 0 0 2 0 0 1 0 1 2 0 0 0 0 0 11 0 0 3 1106.6084 P07118 P07118 616 626 valS Valine--tRNA ligase yes yes 2 0.0022379 62.823 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 15704000 3197400 3226700 0 0 5055000 4224500 0 0 1291 57 1401 7406;7407;7408;7409 5531;5532 5532 2 3197400 3302800 0 0 6097900 4679800 0 0 FTLTEHDGKLYGLGTA TDTVPFDDGRWTRDPFTLTEHDGKLYGLGT TLTEHDGKLYGLGTADMKGFFAFILDALRD P F T T A D 1 0 0 1 0 0 1 3 1 0 3 1 0 1 0 0 3 0 1 0 0 0 16 1 1 0 1721.8625 P23908 P23908 96 111 argE Acetylornithine deacetylase yes yes 3 6.1532E-15 91.812 By MS/MS By MS/MS By MS/MS 1 1 1 84360000 0 1216200 0 0 54155000 28989000 0 0 1292 308 1402 7410;7411;7412 5533;5534 5534 2 0 7279200 0 0 77100000 41324000 0 0 FTNTSGFANK ANYGETRNATPITNKFTNTSGFANKTQDVL PITNKFTNTSGFANKTQDVLLVAQYQFDFG K F T N K T 1 0 2 0 0 0 0 1 0 0 0 1 0 2 0 1 2 0 0 0 0 0 10 0 0 1 1085.5142 P02931 P02931 266 275 ompF Outer membrane protein F yes yes 2 1.4369E-48 162.97 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60803000 8579700 13095000 0 0 19596000 19532000 0 0 1293 38 1403 7413;7414;7415;7416 5535;5536;5537 5537 3 8579700 13404000 0 0 23639000 21638000 0 0 FTRDMGNVEKIE PGWSDDDDSAHRLGEFTRDMGNVEKIELLP LGEFTRDMGNVEKIELLPYHELGKHKWVAM E F T I E L 0 1 1 1 0 0 2 1 0 1 0 1 1 1 0 0 1 0 0 1 0 0 12 2 1 0 1437.6922 P0A9N4 P0A9N4 187 198 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3 0.0076106 34.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 1 1 47303000 14231000 4553900 6529200 5487800 2733300 3066800 3805600 6895400 1294 171 1404 7417;7418;7419;7420;7421;7422;7423;7424;7425 5538;5539;5540 5538 3 62646000 69448000 55478000 41606000 42082000 46481000 29288000 39571000 FTSDQAGRP NNTEPTWFPDSQNLAFTSDQAGRPQVYKVN DSQNLAFTSDQAGRPQVYKVNINGGAPQRI A F T R P Q 1 1 0 1 0 1 0 1 0 0 0 0 0 1 1 1 1 0 0 0 0 0 9 1 0 1 977.45666 P0A855 P0A855 304 312 tolB Protein TolB yes yes 2 0.012977 63.565 By MS/MS 1 1587000 0 0 0 0 0 1587000 0 0 1295 138 1405 7426 5541 5541 1 0 0 0 0 0 2262300 0 0 FTVLISPHVNK AQVRGPIPLPTRKERFTVLISPHVNKDARD RKERFTVLISPHVNKDARDQYEIRTHLRLV R F T N K D 0 0 1 0 0 0 0 0 1 1 1 1 0 1 1 1 1 0 0 2 0 0 11 0 0 1 1253.7132 P0A7R5 P0A7R5 49 59 rpsJ 30S ribosomal protein S10 yes yes 2;3 3.6862E-08 97.456 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 610320000 146920000 144470000 0 0 136000000 182930000 0 0 1296 120 1406 7427;7428;7429;7430;7431;7432;7433;7434 5542;5543;5544;5545;5546;5547 5544 6 146920000 147880000 0 0 164060000 202650000 0 0 FTVLISPHVNKDAR AQVRGPIPLPTRKERFTVLISPHVNKDARD RFTVLISPHVNKDARDQYEIRTHLRLVDIV R F T A R D 1 1 1 1 0 0 0 0 1 1 1 1 0 1 1 1 1 0 0 2 0 0 14 1 0 2 1595.8784 P0A7R5 P0A7R5 49 62 rpsJ 30S ribosomal protein S10 yes yes 4 0.0021273 41.092 By matching By MS/MS 1 1 9378800 4584800 4794000 0 0 0 0 0 0 1297 120 1407 7435;7436 5548 5548 1 4584800 4907200 0 0 0 0 0 0 FTVWSSR ADPWPGAFSYVGNQKFTVWSSRVHPHASKA FSYVGNQKFTVWSSRVHPHASKAQPGSVIS K F T S R V 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 0 1 0 0 7 0 0 0 881.43955 P77398 P77398 240 246 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 6.8797E-25 149.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 6831000000 1829600000 1489100000 0 0 1814100000 1698200000 0 0 1298 432 1408 7437;7438;7439;7440;7441;7442;7443;7444 5549;5550;5551;5552;5553;5554;5555 5553 7 1829600000 1524200000 0 0 2188300000 1881200000 0 0 FTYQRVGDLSTE ALDISGRPHLEYKAEFTYQRVGDLSTEMIE KAEFTYQRVGDLSTEMIEHFFRSLSYTMGV E F T T E M 0 1 0 1 0 1 1 1 0 0 1 0 0 1 0 1 2 0 1 1 0 0 12 1 0 0 1414.6729 P06987 P06987 285 296 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 2.6886E-06 75.695 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 35740000 4929200 6950400 4368900 4078700 2927900 0 6073300 6411000 1299 55 1409 7445;7446;7447;7448;7449;7450;7451 5556;5557;5558;5559;5560 5559 5 75735000 106000000 37122000 30923000 45077000 0 46742000 36792000 FVDLIEIDAASR PCGVCDNCREIEQGRFVDLIEIDAASRTKV QGRFVDLIEIDAASRTKVEDTRDLLDNVQY R F V S R T 2 1 0 2 0 0 1 0 0 2 1 0 0 1 0 1 0 0 0 1 0 0 12 0 1 2 1347.7034 P06710 P06710 87 98 dnaX DNA polymerase III subunit tau yes yes 2 3.1857E-19 120.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19484000 9856300 0 0 0 9627900 0 0 0 1300 51 1410 7452;7453;7454;7455 5561;5562;5563;5564 5564 4 9856300 0 0 0 11614000 0 0 0 FVDLRDVRQP AIRRAATILAEQLEAFVDLRDVRQPEVKEE EQLEAFVDLRDVRQPEVKEEKPEFDPILLR A F V Q P E 0 2 0 2 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 10 2 0 0 1243.6673 P0A7Z4 P0A7Z4 231 240 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3 0.0069446 43.512 By matching By matching By MS/MS By MS/MS 1 1 1 1 5330800 280560 282910 0 0 1799200 2968100 0 0 1301 135 1411 7456;7457;7458;7459 5565 5565 1 1693600 1693200 0 0 2561400 4231100 0 0 FVHTVEQYVTKP YTLPPRQVANGVVDAFVHTVEQYVTKPVDA VDAFVHTVEQYVTKPVDAKIQDRFAEGILL A F V K P V 0 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 2 0 1 3 0 0 12 1 1 0 1446.7507 Q46856 Q46856 196 207 yqhD Alcohol dehydrogenase YqhD yes yes 2 0.0055523 35.959 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 1302 440 1412 7460;7461;7462 5566 5566 70;78 0 0 0 0 0 0 0 0 0 FVHYCPR EADEYDCAFFDKRSKFVHYCPRTLILNNLE AFFDKRSKFVHYCPRTLILNNLEFDHADIF K F V P R T 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 7 0 0 1 977.45416 P37773 P37773 173 179 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.0024349 85.306 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28576000 9226800 8292300 0 0 4910100 6146500 0 0 1303 360 1413 7463;7464;7465;7466 5567;5568;5569;5570 5568 4 9226800 8488000 0 0 5923000 6809000 0 0 FVLGFAQSTVEK YLKPLAERWLVVGDKFVLGFAQSTVEKSFK GDKFVLGFAQSTVEKSFKDAGLVVEIAPFG K F V E K S 1 0 0 0 0 1 1 1 0 0 1 1 0 2 0 1 1 0 0 2 0 0 12 0 1 1 1324.7027 P0A9S5 P0A9S5 39 50 gldA Glycerol dehydrogenase yes yes 2 0.0032073 52.79 By matching By MS/MS By MS/MS 1 1 1 9939600 0 0 3169300 0 6770300 0 0 0 1304 176 1414 7467;7468;7469 5571;5572 5572 2 0 0 26929000 0 8167100 0 0 0 FVNILMVDGK KILPDPKFGSELLAKFVNILMVDGKKSTAE ELLAKFVNILMVDGKKSTAESIVYSALETL K F V G K K 0 0 1 1 0 0 0 1 0 1 1 1 1 1 0 0 0 0 0 2 0 0 10 0 0 0 1134.6107 P02359 P02359 26 35 rpsG 30S ribosomal protein S7 yes yes 2 0.0004581 96.331 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 57080000 9498700 9410600 0 0 14733000 23438000 0 0 1305 36 1415;1416 7470;7471;7472;7473;7474;7475 5573;5574;5575;5576;5577;5578 5575 65 6 9498700 9632700 0 0 17772000 25964000 0 0 FVQDMVK ARKPNAKVVYMHSERFVQDMVKALQNNAIE VVYMHSERFVQDMVKALQNNAIEEFKRYYR R F V V K A 0 0 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 2 0 0 7 0 0 0 865.43677 P03004 P03004 206 212 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.0024451 86.086 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20744000 5843800 5017400 0 0 5031800 4851000 0 0 1306 40 1417 7476;7477;7478;7479 5579;5580;5581;5582 5581 4 5843800 5135800 0 0 6069900 5373900 0 0 FVVECDGEK SDLYDKHIHDQSERRFVVECDGEKAGLVEL DQSERRFVVECDGEKAGLVELVEINHVHRR R F V E K A 0 0 0 1 1 0 2 1 0 0 0 1 0 1 0 0 0 0 0 2 0 0 9 0 2 0 1081.475 P0A951 P0A951 60 68 speG Spermidine N(1)-acetyltransferase yes yes 2 1.3576E-05 107.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 67299000 16879000 13228000 0 0 19601000 17592000 0 0 1307 160 1418 7480;7481;7482;7483 5583;5584;5585;5586 5585 4 16879000 13540000 0 0 23645000 19488000 0 0 FVVEGDLR LSEGQIDTLRDEVAKFVVEGDLRREISMSI LRDEVAKFVVEGDLRREISMSIKRLMDLGC K F V L R R 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 8 0 1 0 933.49198 P0A7S9 P0A7S9 63 70 rpsM 30S ribosomal protein S13 yes yes 2 2.5975E-12 134.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 181970000 32070000 42154000 0 0 49642000 58108000 0 0 1308 123 1419 7484;7485;7486;7487;7488 5587;5588;5589;5590 5590 4 32070000 43149000 0 0 59883000 64831000 0 0 FVVEGDLRR LSEGQIDTLRDEVAKFVVEGDLRREISMSI RDEVAKFVVEGDLRREISMSIKRLMDLGCY K F V R R E 0 2 0 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 9 1 1 0 1089.5931 P0A7S9 P0A7S9 63 71 rpsM 30S ribosomal protein S13 yes yes 2;3 2.2583E-19 141.52 By MS/MS By MS/MS By matching By matching 2 3 1 2 46429000 17021000 19762000 0 0 2905900 6740600 0 0 1309 123 1420 7489;7490;7491;7492;7493;7494;7495;7496 5591;5592;5593;5594;5595 5592 5 17021000 20228000 0 0 3505400 7467100 0 0 FVYSNLRE ALKIYPWVCGRCSREFVYSNLRELTVHHID CGRCSREFVYSNLRELTVHHIDHDHTNNPE E F V R E L 0 1 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 8 1 0 0 1026.5134 P0AAQ2 P0AAQ2 34 41 yajD Uncharacterized protein YajD yes yes 2 0.00026211 110.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 156280000 59744000 43723000 0 0 28662000 24147000 0 0 1310 188 1421 7497;7498;7499;7500 5596;5597;5598;5599 5597 4 917950000 666780000 0 0 441280000 365990000 0 0 FWQQMGLTR HLSVQANAVNWATVKFWQQMGLTRVILSRE NWATVKFWQQMGLTRVILSRELSLEEIEEI K F W T R V 0 1 0 0 0 2 0 1 0 0 1 0 1 1 0 0 1 1 0 0 0 0 9 0 0 0 1165.5702 P76403 P76403 129 137 yegQ Uncharacterized protease YegQ yes yes 2 0.0024696 61.962 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8692800 4105100 4587600 0 0 0 0 0 0 1311 424 1422 7501;7502;7503;7504 5600;5601;5602;5603 5603 4 4105100 4695900 0 0 0 0 0 0 FWVESEKR NATKRRFLPNLHSHRFWVESEKRFVTLRVS PNLHSHRFWVESEKRFVTLRVSAKGMRVID R F W K R F 0 1 0 0 0 0 2 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 8 1 2 0 1079.54 P0A7M2 P0A7M2 38 45 rpmB 50S ribosomal protein L28 yes yes 2;3 0.00039129 91.318 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 81871000 26518000 33628000 0 0 7501900 14223000 0 0 1312 113 1423 7505;7506;7507;7508;7509;7510 5604;5605;5606;5607;5608;5609 5605 6 26518000 34422000 0 0 9049600 15756000 0 0 FYDLISALHK IAGERSARFDNKGDRFYDLISALHKSVRGS NKGDRFYDLISALHKSVRGSAPDAALYWYA R F Y H K S 1 0 0 1 0 0 0 0 1 1 2 1 0 1 0 1 0 0 1 0 0 0 10 0 0 1 1205.6445 P0AAZ4 P0AAZ4 255 264 rarA Replication-associated recombination protein A yes yes 2;3 0.00021967 107.57 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 73137000 23963000 23653000 0 0 13989000 11532000 0 0 1313 189 1424 7511;7512;7513;7514;7515;7516;7517 5610;5611;5612;5613;5614;5615 5612 6 23963000 24211000 0 0 16875000 12775000 0 0 FYGSVARLA ISAIFTHTDNPGEKAFYGSVARLAAERGIP NPGEKAFYGSVARLAAERGIPVYAPDNVNH A F Y L A A 2 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 9 1 0 1 982.52362 P77398 P77398 41 49 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.0086117 79.469 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 65906000 11893000 8435900 0 0 17926000 24911000 0 2739800 1314 432 1425 7518;7519;7520;7521;7522 5616;5617;5618;5619 5619 3 71794000 50489000 0 0 25521000 35511000 0 15723000 FYGVQFHPEVTHTR TESCPFAIMANEEKRFYGVQFHPEVTHTRQ RFYGVQFHPEVTHTRQGMRMLERFVRDICQ R F Y T R Q 0 1 0 0 0 1 1 1 2 0 0 0 0 2 1 0 2 0 1 2 0 0 14 0 1 1 1716.8372 P04079 P04079 175 188 guaA GMP synthase [glutamine-hydrolyzing] yes yes 3;4 0.003103 30.998 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 27391000 5188700 6441500 0 0 6442500 9318500 0 0 1315 44 1426 7523;7524;7525;7526;7527 5620;5621;5622;5623;5624 5623 5 5188700 6593600 0 0 7771600 10323000 0 0 FYHEPSDNLR YLSQLNERLSALAGRFYHEPSDNLRLVGVT ALAGRFYHEPSDNLRLVGVTGTNGKTTTTQ R F Y L R L 0 1 1 1 0 0 1 0 1 0 1 0 0 1 1 1 0 0 1 0 0 0 10 0 1 1 1276.5836 P22188 P22188 101 110 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase yes yes 3 0.0011072 57.785 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17536000 5089600 5064100 0 0 3722600 3659900 0 0 1316 299 1427 7528;7529;7530;7531 5625;5626;5627;5628 5628 4 5089600 5183700 0 0 4490600 4054300 0 0 FYTDGPR KDPRFPEDLDGDGRRFYTDGPRAHEFLHEM DLDGDGRRFYTDGPRAHEFLHEMNRDVFTP R F Y P R A 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 7 0 0 1 854.39227 P28904 P28904 222 228 treC Trehalose-6-phosphate hydrolase yes yes 2 0.001075 103.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25721000 8034800 7215200 0 0 5822300 4648300 0 0 1317 328 1428 7532;7533;7534;7535 5629;5630;5631;5632 5630 4 8034800 7385500 0 0 7023400 5149300 0 0 GAAFQSRLPHDRMTSQE EEENESEPEEPSGVEGAAFQSRLPHDRMTS AFQSRLPHDRMTSQEAACFPDIISGPQQTQ E G A Q E A 2 2 0 1 0 2 1 1 1 0 1 0 1 1 1 2 1 0 0 0 0 0 17 2 0 3 1929.9115 LSD1-FL-His LSD1-FL-His 178 194 yes yes 2;3;4 4.0309E-80 175.26 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 8 6 5 7 6 7 7 124140000000 13940000000 21408000000 18786000000 18422000000 13099000000 9397100000 17772000000 11315000000 1318 24 1429;1430 7536;7537;7538;7539;7540;7541;7542;7543;7544;7545;7546;7547;7548;7549;7550;7551;7552;7553;7554;7555;7556;7557;7558;7559;7560;7561;7562;7563;7564;7565;7566;7567;7568;7569;7570;7571;7572;7573;7574;7575;7576;7577;7578;7579;7580;7581;7582;7583;7584;7585;7586;7587;7588;7589 5633;5634;5635;5636;5637;5638;5639;5640;5641;5642;5643;5644;5645;5646;5647;5648;5649;5650;5651;5652;5653;5654;5655;5656;5657;5658;5659;5660;5661;5662;5663;5664;5665;5666;5667;5668;5669;5670;5671;5672;5673;5674;5675;5676;5677;5678;5679;5680;5681;5682;5683;5684 5668 44 49 214070000000 326430000000 159620000000 139670000000 201570000000 142360000000 136780000000 64936000000 GAAGGHTATHHASAAPARPQPVE RHSDWQRPTFAFEGKGAAGGHTATHHASAA THHASAAPARPQPVE_______________ K G A V E - 7 1 0 0 0 1 1 3 3 0 0 0 0 0 3 1 2 0 0 1 0 0 23 1 0 10 2190.0679 P21513 P21513 1039 1061 rne Ribonuclease E yes yes 4 0.00010545 36.805 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16089000 4506200 5264900 0 0 3366900 2951000 0 0 1319 297 1431 7590;7591;7592;7593 5685;5686;5687 5685 3 4506200 5389100 0 0 4061400 3269000 0 0 GAANFYQK VFTSGATESDNLAIKGAANFYQKKGKHIIT SDNLAIKGAANFYQKKGKHIITSKTEHKAV K G A Q K K 2 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 8 0 0 2 897.43447 P0A6B7 P0A6B7 85 92 iscS Cysteine desulfurase IscS yes yes 2 0.0018119 65.672 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 1320 67 1432 7594;7595 5688;5689 5688 2 0 0 0 0 0 0 0 0 GADEELVK SYQHGARIGVLVAAKGADEELVKHIAMHVA GVLVAAKGADEELVKHIAMHVAASKPEFIK K G A V K H 1 0 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 2 1 859.42871 P0A6P1 P0A6P1 160 167 tsf Elongation factor Ts yes yes 2 0.0028625 73.616 By MS/MS By MS/MS 1 1 10061000 0 0 0 0 5400800 4660600 0 0 1321 77 1433 7596;7597 5690;5691 5690 2 0 0 0 0 6515100 5162900 0 0 GADLIEPTVR VVVDDHFQGVTEIVRGADLIEPTVRQISLY TEIVRGADLIEPTVRQISLYQLFGWKVPDY R G A V R Q 1 1 0 1 0 0 1 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 10 0 1 2 1069.5768 P27305 P27305 201 210 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 2 0.00028402 90.657 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41338000 11901000 9669500 0 0 9263300 10504000 0 0 1322 322 1434 7598;7599;7600;7601 5692;5693;5694;5695 5695 4 11901000 9897700 0 0 11174000 11636000 0 0 GADVGITMIAR VIQAAANVAKALKGRGADVGITMIARSVNS LKGRGADVGITMIARSVNSMGLGIMGGGSL R G A A R S 2 1 0 1 0 0 0 2 0 2 0 0 1 0 0 0 1 0 0 1 0 0 11 0 0 2 1102.5805 P33602 P33602 524 534 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.00017379 81.263 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 3 2 204490000 44604000 54063000 5691000 0 54249000 45878000 0 0 1323 345 1435;1436 7602;7603;7604;7605;7606;7607;7608;7609;7610;7611 5696;5697;5698;5699;5700;5701;5702 5701 276 7 44604000 55339000 48355000 0 130780000 50823000 0 0 GAELELLR QRIGVTDYTILGTVKGAELELLRFTHPFMG TILGTVKGAELELLRFTHPFMGFDVPAILG K G A L R F 1 1 0 0 0 0 2 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 2 1 899.50763 P00956 P00956 298 305 ileS Isoleucine--tRNA ligase yes yes 2 0.0032493 69.998 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 10399000 4596300 0 1522200 0 0 4280500 0 0 1324 32 1437 7612;7613;7614;7615;7616;7617 5703;5704;5705;5706 5706 4 16759000 0 12934000 0 0 4741800 0 0 GAFNLHGSLLP YRHLIYDEILQLAPAGAFNLHGSLLPKYRG LAPAGAFNLHGSLLPKYRGRAPLNWVLVNG A G A L P K 1 0 1 0 0 0 0 2 1 0 3 0 0 1 1 1 0 0 0 0 0 0 11 0 0 1 1124.5978 P77398 P77398 99 109 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.00039948 82.452 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 129120000 16823000 19288000 0 0 44179000 48830000 0 0 1325 432 1438 7618;7619;7620;7621 5707;5708;5709 5709 3 101550000 115440000 0 0 62897000 69608000 0 0 GAIATVHADSDRLSE GTAAGVRRIEAVTGEGAIATVHADSDRLSE GAIATVHADSDRLSEVAHLLKGDSNNLADK E G A S E V 3 1 0 2 0 0 1 1 1 1 1 0 0 0 0 2 1 0 0 1 0 0 15 1 0 3 1540.7481 P00957 P00957 702 716 alaS Alanine--tRNA ligase yes yes 2;3 1.035E-09 75.819 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 2 2 1 2 2 2 107750000 8423000 11882000 14519000 22470000 3258400 7868500 17318000 22008000 1326 33 1439 7622;7623;7624;7625;7626;7627;7628;7629;7630;7631;7632;7633;7634;7635;7636 5710;5711;5712;5713;5714;5715;5716;5717;5718;5719 5718 9 129420000 142910000 123360000 170360000 50167000 86872000 133290000 126300000 GAKASLSAFDYLIRTKTA CTTVPYKQIIIATGEGAKASLSAFDYLIRT ASLSAFDYLIRTKTA_______________ E G A T A - 4 1 0 1 0 0 0 1 0 1 2 2 0 1 0 2 2 0 1 0 0 0 18 3 0 3 1912.0418 P35340 P35340 504 521 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3;4 2.4477E-33 129.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 406720000 16897000 16183000 15417000 27716000 63789000 99440000 50735000 116550000 1327 348 1440 7637;7638;7639;7640;7641;7642;7643;7644;7645;7646;7647;7648;7649;7650;7651;7652 5720;5721;5722;5723;5724;5725;5726;5727;5728;5729;5730;5731;5732;5733;5734;5735 5725 16 259620000 246800000 130990000 210130000 982080000 1507200000 390470000 668830000 GAKQVTIAQLEDVKP PEMEAFMQKPVSKLPGAKQVTIAQLEDVKP GAKQVTIAQLEDVKPLLMKSIHGDDDDHDH P G A K P L 2 0 0 1 0 2 1 1 0 1 1 2 0 0 1 0 1 0 0 2 0 0 15 2 1 2 1595.8883 P39172 P39172 98 112 znuA High-affinity zinc uptake system protein ZnuA yes yes 2;3 2.3276E-11 88.441 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 76723000 4345700 5533900 0 0 41850000 24993000 0 0 1328 361 1441 7653;7654;7655;7656;7657;7658;7659;7660 5736;5737;5738;5739 5736 4 26233000 33120000 0 0 59581000 35628000 0 0 GAKVIYLSPQGRKLDQAGVSE PLRDAIHAAKAAAGEGAKVIYLSPQGRKLD LSPQGRKLDQAGVSELATNQKLILVCGRYE E G A S E L 2 1 0 1 0 2 1 3 0 1 2 2 0 0 1 2 0 0 1 2 0 0 21 3 0 3 2215.1961 P0A873 P0A873 81 101 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 3 2.1692E-23 88.264 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 78174000 6774100 7234000 8296400 11713000 5541900 5013400 15059000 18542000 1329 140 1442 7661;7662;7663;7664;7665;7666;7667;7668 5740;5741;5742;5743;5744;5745;5746 5740 7 104080000 110320000 70493000 88804000 85323000 75986000 115890000 106410000 GALDCSGVK GRVKDLPGVRYHTVRGALDCSGVKDRKQAR RYHTVRGALDCSGVKDRKQARSKYGVKRPK R G A V K D 1 0 0 1 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 0 0 1 905.42767 P0A7S3 P0A7S3 100 108 rpsL 30S ribosomal protein S12 yes yes 2 0.0019459 82.241 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 3 619620000 145500000 159260000 0 0 154000000 160870000 0 0 1330 122 1443;1444 7669;7670;7671;7672;7673;7674;7675 5747;5748;5749;5750;5751;5752 5749 15 4 145500000 163020000 0 0 185770000 192870000 0 0 GALDCSGVKDR GRVKDLPGVRYHTVRGALDCSGVKDRKQAR HTVRGALDCSGVKDRKQARSKYGVKRPKA_ R G A D R K 1 1 0 2 1 0 0 2 0 0 1 1 0 0 0 1 0 0 0 1 0 0 11 1 0 1 1176.5557 P0A7S3 P0A7S3 100 110 rpsL 30S ribosomal protein S12 yes yes 2;3 3.9639E-51 188.04 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 2 203840000 118290000 41763000 0 0 28635000 15159000 0 0 1331 122 1445;1446 7676;7677;7678;7679;7680;7681;7682;7683 5753;5754;5755;5756;5757;5758;5759;5760 5755 15 6 118290000 42748000 0 0 34543000 16793000 0 0 GALDCSGVKDRK GRVKDLPGVRYHTVRGALDCSGVKDRKQAR TVRGALDCSGVKDRKQARSKYGVKRPKA__ R G A R K Q 1 1 0 2 1 0 0 2 0 0 1 2 0 0 0 1 0 0 0 1 0 0 12 2 0 1 1304.6507 P0A7S3 P0A7S3 100 111 rpsL 30S ribosomal protein S12 yes yes 3 0.0081914 31.526 By MS/MS By MS/MS 1 1 11269000 6252800 5015900 0 0 0 0 0 0 1332 122 1447 7684;7685 5761;5762 5761 2 6252800 5134200 0 0 0 0 0 0 GALDLAGLPGK AREAARRAREMTRRKGALDLAGLPGKLADC TRRKGALDLAGLPGKLADCQERDPALSELY K G A G K L 2 0 0 1 0 0 0 3 0 0 3 1 0 0 1 0 0 0 0 0 0 0 11 0 0 3 1010.576 P0AES6 P0AES6 396 406 gyrB DNA gyrase subunit B yes yes 2 0.00015232 83.623 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 123680000 30593000 29026000 0 0 33851000 30210000 0 0 1333 239 1448 7686;7687;7688;7689 5763;5764;5765 5764 3 30593000 29711000 0 0 40835000 33466000 0 0 GALKLKE ALFLGRGDQYPIALEGALKLKEISYIHAEA DQYPIALEGALKLKEISYIHAEAYAAGELK E G A K E I 1 0 0 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 7 2 0 1 757.46979 P17169 P17169 483 489 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 1.5148E-26 149.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 4997100000 552300000 560100000 805620000 834880000 317170000 305910000 697320000 923780000 1334 288 1449 7690;7691;7692;7693;7694;7695;7696;7697 5766;5767;5768;5769;5770;5771;5772;5773;5774;5775 5772 8 8485900000 8541700000 6845200000 6329700000 4883200000 4636500000 5366700000 5301400000 GALLDYHSR ALHELHRLKEHGLTRGALLDYHSRYKLVFL EHGLTRGALLDYHSRYKLVFLAHSQPEYRK R G A S R Y 1 1 0 1 0 0 0 1 1 0 2 0 0 0 0 1 0 0 1 0 0 0 9 0 0 1 1030.5196 P24252 P24252 31 39 ybgA Uncharacterized protein YbgA yes yes 2 4.6318E-38 162.5 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 152080000 38721000 49691000 0 0 31168000 32505000 0 0 1335 313 1450 7698;7699;7700;7701 5776;5777;5778;5779 5777 4 38721000 50864000 0 0 37598000 36008000 0 0 GALLHVEK VFKANDIVVALLQEKGALLHVEKMQHSYPC VALLQEKGALLHVEKMQHSYPCCWRHKTPI K G A E K M 1 0 0 0 0 0 1 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 1 1 865.50215 P00956 P00956 391 398 ileS Isoleucine--tRNA ligase yes yes 2 0.0024066 82.671 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 17280000 3921300 4649600 0 0 3895400 4813700 0 0 1336 32 1451 7702;7703;7704;7705;7706;7707 5780;5781;5782;5783 5783 4 3921300 4759300 0 0 4699000 5582400 0 0 GALSAVVADSR QDKQAIVAEVSEVAKGALSAVVADSRGVTV EVAKGALSAVVADSRGVTVDKMTELRKAGR K G A S R G 3 1 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 11 0 0 3 1044.5564 P0A7J3 P0A7J3 21 31 rplJ 50S ribosomal protein L10 yes yes 2 2.2508E-23 138.08 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 131110000 38496000 38230000 0 0 27654000 26731000 0 0 1337 106 1452 7708;7709;7710;7711 5784;5785;5786 5786 1 38496000 39133000 0 0 33360000 29612000 0 0 GANFSFAVEDTQK YAESGGQVGDKGELKGANFSFAVEDTQKYG LKGANFSFAVEDTQKYGQAIGHIGKLAAGS K G A Q K Y 2 0 1 1 0 1 1 1 0 0 0 1 0 2 0 1 1 0 0 1 0 0 13 0 1 2 1412.6572 P00957 P00957 514 526 alaS Alanine--tRNA ligase yes yes 2 0.01606 48.741 By MS/MS 1 3945000 0 0 0 0 3945000 0 0 0 1338 33 1453 7712 5787 5787 1 0 0 0 0 4758800 0 0 0 GAQVENIQR VMIVGDDDQSIYGWRGAQVENIQRFLNDFP SIYGWRGAQVENIQRFLNDFPGAETIRLEQ R G A Q R F 1 1 1 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 1 1 1013.5254 P03018 P03018 258 266 uvrD DNA helicase II yes yes 2 0.0011624 75.213 By MS/MS By MS/MS By MS/MS 1 1 1 7889700 0 5115800 0 0 2774000 0 0 0 1339 41 1454 7713;7714;7715 5788;5789;5790 5790 2 0 5236500 0 0 3346200 0 0 0 GASQNIIPSSTGAAK KTVDGPSHKDWRGGRGASQNIIPSSTGAAK GASQNIIPSSTGAAKAVGKVLPELNGKLTG R G A A K A 3 0 1 0 0 1 0 2 0 2 0 1 0 0 1 3 1 0 0 0 0 0 15 0 0 4 1400.726 P0A9B2 P0A9B2 199 213 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 1.653E-14 114.71 By MS/MS By MS/MS 1 1 18992000 0 0 0 0 8300500 10691000 0 0 1340 163 1455 7716;7717 5791;5792 5791 2 0 0 0 0 10013000 11844000 0 0 GATVLPHGTGR VNLGIDARKSDQNVRGATVLPHGTGRSVRV QNVRGATVLPHGTGRSVRVAVFTQGANAEA R G A G R S 1 1 0 0 0 0 0 3 1 0 1 0 0 0 1 0 2 0 0 1 0 0 11 0 0 2 1064.5727 P0A7L0 P0A7L0 61 71 rplA 50S ribosomal protein L1 yes yes 2;3 4.7068E-05 96.331 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 76862000 15433000 21885000 0 0 18892000 20651000 0 0 1341 110 1456 7718;7719;7720;7721;7722;7723;7724;7725 5793;5794;5795;5796;5797;5798;5799 5797 7 15433000 22402000 0 0 22790000 22877000 0 0 GAVGERTP AAQPAGLSGPAEVGPGAVGERTPRKKEPPR GPAEVGPGAVGERTPRKKEPPRASPPGGLA P G A T P R 1 1 0 0 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 1 0 0 8 1 1 1 785.40317 LSD1-FL-His LSD1-FL-His 55 62 yes yes 2 0.0063382 89.296 By MS/MS By MS/MS By MS/MS 1 1 1 62005000 16043000 17765000 0 0 0 28197000 0 0 1342 24 1457 7726;7727;7728 5800;5801 5800 0 96843000 106320000 0 0 0 40195000 0 0 GAVLDIRYGVSRIAYSKDFE LGGCPKERAEISMLEGAVLDIRYGVSRIAY IRYGVSRIAYSKDFETLKVDFLSKLPEMLK E G A F E T 2 2 0 2 0 0 1 2 0 2 1 1 0 1 0 2 0 0 2 2 0 0 20 3 0 2 2258.1695 GST-Nek6 GST-Nek6 97 116 yes yes 3 1.51E-10 72.446 By MS/MS By MS/MS 1 1 17587000 0 0 0 0 8582300 9004500 0 0 1343 23 1458 7729;7730 5802;5803 5802 2 0 0 0 0 132130000 136480000 0 0 GAVPGATGSDLIVKPAVK DVVRVDAERNLLLVKGAVPGATGSDLIVKP PGATGSDLIVKPAVKA______________ K G A V K A 3 0 0 1 0 0 0 3 0 1 1 2 0 0 2 1 1 0 0 3 0 0 18 1 0 5 1678.9618 P60438 P60438 191 208 rplC 50S ribosomal protein L3 yes yes 2;3 6.9883E-30 120.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 403950000 42193000 165920000 0 0 25689000 170150000 0 0 1344 380 1459 7731;7732;7733;7734;7735;7736 5804;5805;5806;5807;5808;5809 5804 6 42193000 169840000 0 0 30988000 188490000 0 0 GAVPGATGSDLIVKPAVKA DVVRVDAERNLLLVKGAVPGATGSDLIVKP GATGSDLIVKPAVKA_______________ K G A K A - 4 0 0 1 0 0 0 3 0 1 1 2 0 0 2 1 1 0 0 3 0 0 19 2 0 5 1749.9989 P60438 P60438 191 209 rplC 50S ribosomal protein L3 yes yes 3 3.6861E-05 61.648 By MS/MS By MS/MS 1 1 19395000 9505000 9890400 0 0 0 0 0 0 1345 380 1460 7737;7738 5810;5811 5811 2 9505000 10124000 0 0 0 0 0 0 GAVSEYEALHEIFK EALAFNGIDPNDPDRGAVSEYEALHEIFKV RGAVSEYEALHEIFKVVRKGIKASGCNRAI R G A F K V 2 0 0 0 0 0 3 1 1 1 1 1 0 1 0 1 0 0 1 1 0 0 14 0 3 2 1591.7882 P30014 P30014 88 101 rnt Ribonuclease T yes yes 2;3 0.00012555 65.219 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 52179000 13254000 9639400 0 0 13318000 15967000 0 0 1346 330 1461 7739;7740;7741;7742;7743;7744 5812;5813;5814;5815;5816;5817;5818 5816 7 13254000 9866900 0 0 16066000 17688000 0 0 GAYGTVIMDSR GTLREAVLRAIPQLRGAYGTVIMDSRHPDT PQLRGAYGTVIMDSRHPDTLLAARSGSPLV R G A S R H 1 1 0 1 0 0 0 2 0 1 0 0 1 0 0 1 1 0 1 1 0 0 11 0 0 1 1168.5547 P17169 P17169 155 165 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.6346E-95 191.17 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 5174400000 1376400000 1181000000 0 0 1267600000 1349300000 0 0 1347 288 1462;1463 7745;7746;7747;7748;7749;7750;7751;7752 5819;5820;5821;5822;5823;5824;5825;5826;5827;5828 5825 245 10 1376400000 1208900000 0 0 1529100000 1494700000 0 0 GAYGTVIMDSRHPDTLLAAR GTLREAVLRAIPQLRGAYGTVIMDSRHPDT VIMDSRHPDTLLAARSGSPLVIGLGMGENF R G A A R S 3 2 0 2 0 0 0 2 1 1 2 0 1 0 1 1 2 0 1 1 0 0 20 1 0 4 2143.0844 P17169 P17169 155 174 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 1.5838E-64 158.74 By MS/MS By MS/MS By MS/MS 1 1 1 108520000 54016000 49535000 0 0 4970400 0 0 0 1348 288 1464 7753;7754;7755 5829;5830;5831 5829 3 54016000 50704000 0 0 5995800 0 0 0 GCDGPWGPHAK DVVARSIMIEIREGRGCDGPWGPHAKLKLD REGRGCDGPWGPHAKLKLDHLGKEVLESRL R G C A K L 1 0 0 1 1 0 0 3 1 0 0 1 0 0 2 0 0 1 0 0 0 0 11 0 0 3 1180.5084 P0AC41 P0AC41 302 312 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2;3 0.00016472 89.698 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 56538000 13237000 17586000 0 0 13041000 12674000 0 0 1349 203 1465 7756;7757;7758;7759;7760;7761;7762;7763 5832;5833;5834;5835;5836;5837;5838 5834 7 13237000 18001000 0 0 15732000 14040000 0 0 GCHLDAQMIADAAPR IRATGTPAIQVNTGKGCHLDAQMIADAAPR GCHLDAQMIADAAPRLPLDDNGILFIENVG K G C P R L 4 1 0 2 1 1 0 1 1 1 1 0 1 0 1 0 0 0 0 0 0 0 15 0 0 5 1624.745 P0AAN3 P0AAN3 165 179 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 0.0015809 43.791 By MS/MS By MS/MS By MS/MS 1 1 1 18356000 6235100 5109200 0 0 0 7011400 0 0 1350 187 1466 7764;7765;7766 5839;5840;5841 5840 3 6235100 5229800 0 0 0 7767100 0 0 GDAMAKGLE ALQECMQHNFSVFREGDAMAKGLEQLKVIR FSVFREGDAMAKGLEQLKVIRERLKNARLD E G D L E Q 2 0 0 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 9 1 0 2 890.41677 P0AC41 P0AC41 477 485 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.00075488 96.668 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76019000 0 0 10666000 13488000 0 0 22782000 29083000 1351 203 1467 7767;7768;7769;7770 5842;5843 5843 180 2 0 0 90629000 102260000 0 0 175340000 166900000 GDATVLVVGADDKVETRPIVASQAIGDK NAILVPQQGVTRTPRGDATVLVVGADDKVE VETRPIVASQAIGDKWLVTEGLKAGDRVVI R G D D K W 4 1 0 4 0 1 1 3 0 2 1 2 0 0 1 1 2 0 0 5 0 0 28 2 1 5 2823.4978 P0AE06 P0AE06 319 346 acrA Multidrug efflux pump subunit AcrA yes yes 3 2.2263E-16 68.895 By MS/MS By MS/MS 1 1 22038000 0 0 0 0 10868000 11169000 0 0 1352 232 1468 7771;7772 5844;5845 5845 1 0 0 0 0 13111000 12373000 0 0 GDAYVTSDVGQHQMFAALYYPFDKPR IKPQAVIETLWRLTKGDAYVTSDVGQHQMF HQMFAALYYPFDKPRRWINSGGLGTMGFGL K G D P R R 3 1 0 3 0 2 0 2 1 0 1 1 1 2 2 1 1 0 3 2 0 0 26 1 0 5 2975.3912 P00893 P00893 387 412 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 4 8.7497E-08 47.807 By MS/MS By MS/MS 1 1 15770000 0 0 0 0 10777000 4992500 0 0 1353 29 1469 7773;7774 5846;5847 5846 2 0 0 0 0 13000000 5530600 0 0 GDCREDEHAHE RLTNHSLYLYGHCAEGDCREDEHAHEGK__ HCAEGDCREDEHAHEGK_____________ E G D H E G 1 1 0 2 1 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 2 1 1353.5004 P0A9A9 P0A9A9 136 146 fur Ferric uptake regulation protein yes yes 3 0.0015354 47.894 By MS/MS By MS/MS 4 1 2349700 0 0 0 0 0 0 0 2349700 1354 162 1470 7775;7776;7777;7778;7779 5848;5849;5850;5851;5852 5849 5 0 0 0 0 0 0 0 13485000 GDFDVIESR LLREGNPNLSFIYLKGDFDVIESRLKARKG SFIYLKGDFDVIESRLKARKGHFFKTQMLV K G D S R L 0 1 0 2 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 9 0 1 0 1036.4825 P46859 P46859 112 120 gntK Thermoresistant gluconokinase yes yes 2 1.3893E-33 133.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 158030000 65922000 51971000 0 0 40140000 0 0 0 1355 372 1471 7780;7781;7782;7783 5853;5854;5855;5856 5856 4 65922000 53197000 0 0 48421000 0 0 0 GDIDANAFQHKPYLDQQLK VTFNDYVLPNEALSKGDIDANAFQHKPYLD ANAFQHKPYLDQQLKDRGYKLVAVGNTFVY K G D L K D 2 0 1 3 0 3 0 1 1 1 2 2 0 1 1 0 0 0 1 0 0 0 19 1 0 3 2200.0913 P28635 P28635 79 97 metQ D-methionine-binding lipoprotein MetQ yes yes 3 9.9737E-09 79.676 By matching By matching By MS/MS By MS/MS 1 1 1 1 29996000 4707200 7383300 0 0 8751100 9154800 0 0 1356 326 1472 7784;7785;7786;7787 5857;5858 5858 2 4707200 7557600 0 0 10557000 10141000 0 0 GDISEFAPR LHILGVMEQAINAPRGDISEFAPRIHTIKI AINAPRGDISEFAPRIHTIKINPDKIKDVI R G D P R I 1 1 0 1 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1 2 990.47706 P05055 P05055 546 554 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 7.183E-06 107.9 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 48540000 11343000 9801400 0 0 12482000 14913000 0 0 1357 48 1473 7788;7789;7790;7791 5859;5860;5861;5862 5862 4 11343000 10033000 0 0 15058000 16520000 0 0 GDKSSVVNNPTGRKRPAEK GLDHKISNQRKIVTEGDKSSVVNNPTGRKR SVVNNPTGRKRPAEK_______________ E G D E K - 1 2 2 1 0 0 1 2 0 0 0 3 0 0 2 2 1 0 0 2 0 0 19 4 1 3 2039.0872 P68191 P68191 27 45 sra Stationary-phase-induced ribosome-associated protein yes yes 4;5 0.0024031 25.198 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 1 73271000 5394600 6084300 11311000 17851000 3748300 3184600 16914000 8783700 1358 401 1474 7792;7793;7794;7795;7796;7797;7798;7799;7800;7801;7802;7803;7804;7805;7806 5863;5864;5865;5866;5867;5868;5869;5870;5871 5867 9 82887000 92787000 96108000 135340000 57709000 48268000 130170000 50408000 GDLAIVKFSPNE NGGFTAEQITKYSGEGDLAIVKFSPNEQNK SGEGDLAIVKFSPNEQNKHIGEVVKPATMS E G D N E Q 1 0 1 1 0 0 1 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 12 1 0 2 1288.6663 CON__P0C1U8 CON__P0C1U8 160 171 yes yes 2 7.3255E-66 169.99 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 421540000 94643000 85261000 0 0 68874000 69366000 103400000 0 + 1359 11 1475 7807;7808;7809;7810;7811 5872;5873;5874;5875 5875 4 1454200000 1300200000 0 0 1060400000 1051300000 795790000 0 GDLAIVKFSPNEQNKHIGE NGGFTAEQITKYSGEGDLAIVKFSPNEQNK IVKFSPNEQNKHIGEVVKPATMSNNAETQV E G D G E V 1 0 2 1 0 1 2 2 1 2 1 2 0 1 1 1 0 0 0 1 0 0 19 2 1 2 2095.0698 CON__P0C1U8 CON__P0C1U8 160 178 yes yes 2;3;4 1.1172E-158 249.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 4 4 1 2 3 4 21476000000 935570000 803740000 4338000000 4372900000 260360000 198590000 4977100000 5589300000 + 1360 11 1476 7812;7813;7814;7815;7816;7817;7818;7819;7820;7821;7822;7823;7824;7825;7826;7827;7828;7829;7830;7831;7832;7833;7834;7835;7836 5876;5877;5878;5879;5880;5881;5882;5883;5884;5885;5886;5887;5888;5889;5890;5891;5892;5893;5894;5895;5896;5897 5891 22 14359000000 12257000000 36859000000 33153000000 4008500000 3009900000 38305000000 32076000000 GDLGLVIACLPYA TKRKRHLRPKAMVSKGDLGLVIACLPYA__ SKGDLGLVIACLPYA_______________ K G D Y A - 2 0 0 1 1 0 0 2 0 1 3 0 0 0 1 0 0 0 1 1 0 0 13 0 0 2 1360.7061 P0A7Q1 P0A7Q1 53 65 rpmI 50S ribosomal protein L35 yes yes 2 0.00057486 66.504 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 91715000 29631000 0 0 0 28602000 33481000 0 0 1361 118 1477 7837;7838;7839;7840 5898;5899 5899 2 29631000 0 0 0 34503000 37089000 0 0 GDLHYGHGE TGIKAPEFTPSQTEEGDLHYGHGEAGTHAP PSQTEEGDLHYGHGEAGTHAPGMSQRRMLE E G D G E A 0 0 0 1 0 0 1 3 2 0 1 0 0 0 0 0 0 0 1 0 0 0 9 0 0 0 983.40971 P0AAN3 P0AAN3 56 64 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 2 0.023679 53.166 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 72358000 6815900 3699200 11222000 13762000 1478500 1717000 15229000 18435000 1362 187 1478 7841;7842;7843;7844;7845;7846;7847;7848 5900 5900 1 104720000 56413000 95351000 104340000 22763000 26024000 117210000 105790000 GDLNYLR YFTLALYTSAPSKLKGDLNYLRLEWGPDFQ TSAPSKLKGDLNYLRLEWGPDFQQHEAGLI K G D L R L 0 1 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 7 0 0 0 849.43447 P0A8R9 P0A8R9 178 184 hdfR HTH-type transcriptional regulator HdfR yes yes 2 0.0017489 99.511 By MS/MS By MS/MS By MS/MS 1 2 1 66800000 16769000 0 0 0 35963000 14068000 0 0 1363 152 1479 7849;7850;7851;7852 5901;5902;5903 5902 3 16769000 0 0 0 47970000 15585000 0 0 GDLYIDDHHTVEDTGLALGEALK QIATHGGFRMEINVKGDLYIDDHHTVEDTG HTVEDTGLALGEALKIALGDKRGICRFGFV K G D L K I 2 0 0 4 0 0 2 3 2 1 4 1 0 0 0 0 2 0 1 1 0 0 23 0 2 2 2481.2023 P06987 P06987 222 244 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3;4 6.3304E-198 222.72 By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 464170000 115720000 87519000 0 0 116340000 144600000 0 0 1364 55 1480 7853;7854;7855;7856;7857;7858;7859;7860 5904;5905;5906 5905 3 115720000 89584000 0 0 140340000 160180000 0 0 GDMGDVQHFADDVIAQR VHINHDDCLEIAVLKGDMGDVQHFADDVIA MGDVQHFADDVIAQRGVRHGHLQCLPKED_ K G D Q R G 2 1 0 4 0 2 0 2 1 1 0 0 1 1 0 0 0 0 0 2 0 0 17 0 0 2 1872.8425 P0A6Z6 P0A6Z6 103 119 nikR Nickel-responsive regulator yes yes 3 0.0002488 50.053 By MS/MS By MS/MS 1 1 24253000 0 0 0 0 10345000 13908000 0 0 1365 89 1481 7861;7862 5907;5908 5908 98 2 0 0 0 0 12480000 15407000 0 0 GDMIFPAETMTVE GRGVMVLDDEDRENEGDMIFPAETMTVEQM NEGDMIFPAETMTVEQMALTIRHGSGIVCL E G D V E Q 1 0 0 1 0 0 2 1 0 1 0 0 2 1 1 0 2 0 0 1 0 0 13 0 1 2 1439.6313 P0A7J0 P0A7J0 41 53 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 1.4103E-05 57.598 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 2 3 3 3 114350000 11324000 11886000 11652000 25348000 15317000 17220000 9966900 11634000 1366 105 1482;1483 7863;7864;7865;7866;7867;7868;7869;7870;7871;7872;7873;7874;7875;7876;7877;7878;7879;7880;7881;7882;7883 5909;5910;5911;5912;5913 5912 113 4 173990000 181260000 99006000 192180000 235810000 260990000 76708000 66767000 GDQIQSGVDA DGERRYILAPKGLKAGDQIQSGVDAAIKPG KGLKAGDQIQSGVDAAIKPGNTLPMRNIPV A G D D A A 1 0 0 2 0 2 0 2 0 1 0 0 0 0 0 1 0 0 0 1 0 0 10 0 0 0 988.44615 P60422 P60422 113 122 rplB 50S ribosomal protein L2 yes yes 2 0.018959 36.842 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20390000 2040300 1948800 0 0 10875000 5525800 0 0 1367 379 1484 7884;7885;7886;7887 5914 5914 0 12317000 11664000 0 0 15483000 7877100 0 0 GDQYPIALEGALK AEDFSDKHHALFLGRGDQYPIALEGALKLK GRGDQYPIALEGALKLKEISYIHAEAYAAG R G D L K L 2 0 0 1 0 1 1 2 0 1 2 1 0 0 1 0 0 0 1 0 0 0 13 0 1 3 1373.7191 P17169 P17169 474 486 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.5185E-08 103.69 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 1 1 9267800000 1920900000 1951300000 121430000 171460000 1780500000 2235100000 1086300000 996350 1368 288 1485 7888;7889;7890;7891;7892;7893;7894;7895;7896;7897;7898 5915;5916;5917;5918 5915 4 3067500000 3182700000 1031800000 1300000000 2147800000 2975400000 8360400000 5717900 GDRTTPSIIAYTQDGE AIMDGTTPRVLENAEGDRTTPSIIAYTQDG DRTTPSIIAYTQDGETLVGQPAKRQAVTNP E G D G E T 1 1 0 2 0 1 1 2 0 2 0 0 0 0 1 1 3 0 1 0 0 0 16 1 0 2 1722.8061 P0A6Y8 P0A6Y8 32 47 dnaK Chaperone protein DnaK yes yes 2 4.1458E-22 97.463 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 450380000 43780000 44886000 70122000 64344000 23157000 18487000 81726000 103880000 1369 86 1486 7899;7900;7901;7902;7903;7904;7905;7906 5919;5920;5921;5922;5923;5924;5925 5919 7 672670000 684510000 595820000 487830000 356530000 280200000 628980000 596140000 GDTLPSSKGVL FKAFGRTLRQAIRVEGDTLPSSKGVL____ IRVEGDTLPSSKGVL_______________ E G D V L - 0 0 0 1 0 0 0 2 0 0 2 1 0 0 1 2 1 0 0 1 0 0 11 1 0 1 1072.5764 P06987 P06987 345 355 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 3.6528E-06 115.71 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 1037500000 121500000 96525000 150370000 156100000 61016000 59823000 160770000 231390000 1370 55 1487 7907;7908;7909;7910;7911;7912;7913;7914;7915 5926;5927;5928;5929 5929 4 1866800000 1472000000 1277700000 1183500000 939390000 906710000 1237300000 1327900000 GDVFATAR RSETLAMIIDGRHHKGDVFATARIAGIQAA IDGRHHKGDVFATARIAGIQAAKRTWDLIP K G D A R I 2 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 8 0 0 2 835.41882 P0A738 P0A738 52 59 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 0.0031233 70.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 84757000 20762000 22310000 0 0 21639000 20046000 0 0 1371 93 1488 7916;7917;7918;7919 5930 5930 1 20762000 22837000 0 0 26103000 22206000 0 0 GDVHYVQIGAR RLADDVGIWPLVVIRGDVHYVQIGARTNIQ VVIRGDVHYVQIGARTNIQDGSMLHVTHKS R G D A R T 1 1 0 1 0 1 0 2 1 1 0 0 0 0 0 0 0 0 1 2 0 0 11 0 0 1 1213.6204 P0A9W9 P0A9W9 47 57 yrdA Protein YrdA yes yes 2;3 2.4091E-17 128.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 875520000 295260000 222130000 0 0 151900000 206230000 0 0 1372 179 1489 7920;7921;7922;7923;7924;7925;7926;7927 5931;5932;5933;5934;5935;5936;5937;5938 5933 8 295260000 227370000 0 0 183240000 228450000 0 0 GDVISDGPEAPHDILR KWRQLNVFEGERVERGDVISDGPEAPHDIL DVISDGPEAPHDILRLRGVHAVTRYIVNEV R G D L R L 1 1 0 3 0 0 1 2 1 2 1 0 0 0 2 1 0 0 0 1 0 0 16 0 1 3 1689.8322 P0A8T7 P0A8T7 1207 1222 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 0.002334 38.093 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46737000 19714000 0 0 0 9117500 17906000 0 0 1373 153 1490 7928;7929;7930;7931 5939;5940;5941;5942 5939 4 19714000 0 0 0 10999000 19835000 0 0 GDVLADGPSTDLGELALGQNMR INQMPCVSLGEPVERGDVLADGPSTDLGEL PSTDLGELALGQNMRVAFMPWNGYNFEDSI R G D M R V 2 1 1 3 0 1 1 4 0 0 4 0 1 0 1 1 1 0 0 1 0 0 22 0 1 3 2228.0743 P0A8V2 P0A8V2 780 801 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 1.4451E-61 146.47 By MS/MS By MS/MS By MS/MS 2 1 1 12509000 2816000 4151400 0 0 0 5541300 0 0 1374 154 1491 7932;7933;7934;7935 5943;5944;5945 5945 3 2816000 4249400 0 0 0 6138500 0 0 GDYLVLHDTGAYGA EGGNVETRALPEVKAGDYLVLHDTGAYGAS AGDYLVLHDTGAYGASMSSNYNSRPLLPEV A G D G A S 2 0 0 2 0 0 0 3 1 0 2 0 0 0 0 0 1 0 2 1 0 0 14 0 0 1 1450.6729 P00861 P00861 367 380 lysA Diaminopimelate decarboxylase yes yes 2 1.2474E-05 73.985 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10868000 1008000 833460 0 0 6051700 2974600 0 0 1375 28 1492 7936;7937;7938;7939 5946;5947 5946 2 6085100 4988300 0 0 8615800 4240200 0 0 GDYQRADE LRVVAVATKYLPAREGDYQRADESDLILEG KYLPAREGDYQRADESDLILEGYIAFLDPP E G D D E S 1 1 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 8 1 0 1 952.38864 P0ABB8 P0ABB8 525 532 mgtA Magnesium-transporting ATPase, P-type 1 yes yes 2 0.0041188 60.788 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 1376 195 1493 7940;7941;7942;7943;7944;7945 5948;5949;5950 5948 75 0 0 0 0 0 0 0 0 0 GEAKFRIP LTPRECARLMGFEAPGEAKFRIPVSDTQAY LMGFEAPGEAKFRIPVSDTQAYRQFGNSVV P G E I P V 1 1 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 8 2 1 1 916.51305 P0AED9 P0AED9 417 424 dcm DNA-cytosine methyltransferase yes yes 2 1.0249E-07 124.59 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 72310000 7156100 7893400 0 0 33720000 23541000 0 0 1377 235 1494 7946;7947;7948;7949 5951;5952 5951 2 43198000 47242000 0 0 48006000 33558000 0 0 GEALASISSVSR ASLDDLEAIISLGFRGEALASISSVSRLTL GFRGEALASISSVSRLTLTSRTAEQQEAWQ R G E S R L 2 1 0 0 0 0 1 1 0 1 1 0 0 0 0 4 0 0 0 1 0 0 12 0 1 2 1175.6146 P23367 P23367 96 107 mutL DNA mismatch repair protein MutL yes yes 2 1.0899E-09 112.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37895000 11433000 9594400 0 0 7495300 9372200 0 0 1378 302 1495 7950;7951;7952;7953 5953;5954;5955;5956 5954 4 11433000 9820800 0 0 9041600 10382000 0 0 GEASPEQILLLAFGR KTSVLVARAGWLLARGEASPEQILLLAFGR GEASPEQILLLAFGRKAAEEMDERIRERLH R G E G R K 2 1 0 0 0 1 2 2 0 1 3 0 0 1 1 1 0 0 0 0 0 0 15 0 2 3 1599.8621 P15038 P15038 237 251 helD Helicase IV yes yes 2 3.7462E-108 192.5 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 269910000 91670000 61157000 0 0 64858000 52227000 0 0 1379 281 1496 7954;7955;7956;7957 5957;5958;5959;5960 5960 4 91670000 62601000 0 0 78238000 57856000 0 0 GEATAHLIEDIPTGIYTIPEISSVGK AAYDQGRIAAQALVKGEATAHLIEDIPTGI PTGIYTIPEISSVGKTEQQLTAMKVPYEVG K G E G K T 2 0 0 1 0 0 3 3 1 5 1 1 0 0 2 2 3 0 1 1 0 0 26 0 3 4 2710.4065 P27306 P27306 336 361 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 7.5678E-10 55.881 By MS/MS By MS/MS 1 1 92224000 0 0 0 0 45976000 46248000 0 0 1380 323 1497 7958;7959 5961 5961 1 0 0 0 0 55461000 51232000 0 0 GEDHINNTPR VVVDDWDMEITHVIRGEDHINNTPRQINIL THVIRGEDHINNTPRQINILKALKAPVPVY R G E P R Q 0 1 2 1 0 0 1 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 10 0 1 1 1151.5319 P04805 P04805 200 209 gltX Glutamate--tRNA ligase yes yes 2;3 0.0010963 74.841 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 54811000 17445000 17704000 0 0 11089000 8572900 0 0 1381 45 1498 7960;7961;7962;7963;7964;7965;7966;7967 5962;5963;5964;5965;5966;5967 5966 3 17445000 18122000 0 0 13376000 9496800 0 0 GEDIIDFSMGNPDGATPPHIVEK VFNITAELKMAARRRGEDIIDFSMGNPDGA MGNPDGATPPHIVEKLCTVAQRPDTHGYST R G E E K L 1 0 1 3 0 0 2 3 1 3 0 1 1 1 3 1 1 0 0 1 0 0 23 0 2 4 2438.1424 P77434 P77434 35 57 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 3 0.0015532 33.187 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27774000 5370900 5896800 0 0 8142600 8363300 0 0 1382 433 1499 7968;7969;7970;7971 5968;5969 5969 2 5370900 6036000 0 0 9822400 9264700 0 0 GEDKAAIEAK TAIESALTALETALKGEDKAAIEAKMQELA ETALKGEDKAAIEAKMQELAQVSQKLMEIA K G E A K M 3 0 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 10 1 2 3 1030.5295 P0A6Y8 P0A6Y8 578 587 dnaK Chaperone protein DnaK yes yes 2 0.0050931 66.692 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9031300 3441900 3461900 0 0 1293700 833720 0 0 1383 86 1500 7972;7973;7974;7975 5970 5970 1 3441900 3543600 0 0 1560600 923580 0 0 GEDQYRTKGVTYCP IIVATGAKWRNMNVPGEDQYRTKGVTYCPH PGEDQYRTKGVTYCPHCDGPLFKGKRVAVI P G E C P H 0 1 0 1 1 1 1 2 0 0 0 1 0 0 1 0 2 0 2 1 0 0 14 2 1 0 1672.7515 P35340 P35340 333 346 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3 0.010714 31.215 By MS/MS 1 0 0 0 0 0 0 0 0 0 1384 348 1501 7976 5971 5971 1 0 0 0 0 0 0 0 0 GEEEQTLNR FNYGVEVRHPQFFAKGEEEQTLNRGLHQRG PQFFAKGEEEQTLNRGLHQRGVNRVILDSR K G E N R G 0 1 1 0 0 1 3 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 3 0 1074.4942 P37348 P37348 140 148 yecE UPF0759 protein YecE yes yes 2 0.0031393 46.129 By MS/MS 1 0 0 0 0 0 0 0 0 0 1385 356 1502 7977 5972 5972 1 0 0 0 0 0 0 0 0 GEELQETLTELDDRA ______________________________ GEELQETLTELDDRAVVDYLIKNPEFFIRN P G E R A V 1 1 0 2 0 1 4 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 15 1 4 0 1717.8006 P23305 P23305 5 19 yigA Uncharacterized protein YigA yes yes 2 0.010911 38.634 By MS/MS By MS/MS 1 1 1421100 0 0 0 0 706340 714810 0 0 1386 301 1503 7978;7979 5973 5973 1 0 0 0 0 1005600 1019000 0 0 GEFEQIDEEYKRLA LQYQLKELNEFNPQPGEFEQIDEEYKRLAN PGEFEQIDEEYKRLANSGQLLTTSQNALAL P G E L A N 1 1 0 1 0 1 4 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 14 2 4 0 1725.821 P05824 P05824 205 218 recN DNA repair protein RecN yes yes 3 0.0020197 50.897 By MS/MS By MS/MS 1 1 8366400 0 0 0 0 4639000 3727400 0 0 1387 49 1504 7980;7981 5974 5974 1 0 0 0 0 6604500 5313300 0 0 GEGAYLK YHPQARNFLLTEALRGEGAYLKRPDGTRFM FLLTEALRGEGAYLKRPDGTRFMPDFDERG R G E L K R 1 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 1 0 0 0 7 0 1 1 736.37555 P10902 P10902 264 270 nadB L-aspartate oxidase yes yes 2 0.0088168 57.463 By MS/MS By MS/MS 1 1 42604000 25506000 0 0 0 0 17098000 0 0 1388 274 1505 7982;7983 5975 5975 1 25506000 0 0 0 0 18940000 0 0 GEGEAEMLGFYEAMQNHTIK PDLELGGVLIALRIKGEGEAEMLGFYEAMQ EMLGFYEAMQNHTIKLTPPAGKPMPIVIPS K G E I K L 2 0 1 0 0 1 4 3 1 1 1 1 2 1 0 0 1 0 1 0 0 0 20 0 4 2 2254.0035 P30177 P30177 53 72 ybiB Uncharacterized protein YbiB yes yes 3 0.00048666 45.257 By MS/MS By matching By MS/MS By MS/MS 1 2 1 2 28597000 3674900 10056000 0 0 2741200 12126000 0 0 1389 332 1506 7984;7985;7986;7987;7988;7989 5976;5977 5976 0 3674900 10293000 0 0 3306700 13432000 0 0 GEGEAGEHGAP KIPAGVDTGDRIRLAGEGEAGEHGAPAGDL IRLAGEGEAGEHGAPAGDLYVQVQVKQHPI A G E A P A 2 0 0 0 0 0 3 4 1 0 0 0 0 0 1 0 0 0 0 0 0 0 11 0 3 2 1009.4101 P08622 P08622 230 240 dnaJ Chaperone protein DnaJ yes yes 2 1.553E-08 98.299 By MS/MS By MS/MS By matching 1 1 1 31387000 7938800 14286000 0 0 0 9161800 0 0 1390 61 1507 7990;7991;7992 5978;5979 5979 1 47923000 85504000 0 0 0 13060000 0 0 GEGGYLLNK TGIAGAGVLVTEGCRGEGGYLLNKHGERFM VTEGCRGEGGYLLNKHGERFMERYAPNAKD R G E N K H 0 0 1 0 0 0 1 3 0 0 2 1 0 0 0 0 0 0 1 0 0 0 9 0 1 0 949.4869 P0AC41 P0AC41 259 267 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.0017295 84.097 By matching By MS/MS By matching By MS/MS 1 1 1 1 165200000 45397000 46446000 0 0 34998000 38360000 0 0 1391 203 1508 7993;7994;7995;7996 5980;5981 5980 2 45397000 47542000 0 0 42218000 42494000 0 0 GEGMVLTGPK VLGLYYMTRDCVNAKGEGMVLTGPKEAERL CVNAKGEGMVLTGPKEAERLYRSGLASLHA K G E P K E 0 0 0 0 0 0 1 3 0 0 1 1 1 0 1 0 1 0 0 1 0 0 10 0 1 1 987.50592 P0A8T7 P0A8T7 522 531 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0020427 66.299 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 61309000 11165000 7391100 0 19241000 6535800 16975000 0 0 1392 153 1509 7997;7998;7999;8000;8001;8002 5982;5983;5984 5984 3 11165000 7565600 0 145880000 9304900 19541000 0 0 GEHTIRNYP SIPGAPQPIPRLFFAGEHTIRNYPATVHGA PRLFFAGEHTIRNYPATVHGALLSGLREAG A G E Y P A 0 1 1 0 0 0 1 1 1 1 0 0 0 0 1 0 1 0 1 0 0 0 9 1 1 0 1085.5254 LSD1-FL-His LSD1-FL-His 802 810 yes yes 2;3 7.593E-15 131.03 By MS/MS By MS/MS By matching By MS/MS 2 2 1 3 5427500000 1169400000 1217100000 0 1214800 0 3039800000 0 0 1393 24 1510;1511 8003;8004;8005;8006;8007;8008;8009;8010 5985;5986;5987;5988;5989;5990;5991 5989 43 3 7058900000 7284400000 0 9209900 0 4333200000 0 0 GEHTIRNYPA SIPGAPQPIPRLFFAGEHTIRNYPATVHGA RLFFAGEHTIRNYPATVHGALLSGLREAGR A G E P A T 1 1 1 0 0 0 1 1 1 1 0 0 0 0 1 0 1 0 1 0 0 0 10 1 1 1 1156.5625 LSD1-FL-His LSD1-FL-His 802 811 yes yes 2;3 7.0362E-12 128.61 By MS/MS By MS/MS By MS/MS 2 2 2 683550000 163480000 185470000 0 0 0 334600000 0 0 1394 24 1512 8011;8012;8013;8014;8015;8016 5992;5993;5994;5995;5996;5997;5998;5999 5995 7 986850000 1110100000 0 0 0 476970000 0 0 GEHTIRNYPATVHGA SIPGAPQPIPRLFFAGEHTIRNYPATVHGA GEHTIRNYPATVHGALLSGLREAGRIADQF A G E G A L 2 1 1 0 0 0 1 2 2 1 0 0 0 0 1 0 2 0 1 1 0 0 15 1 1 2 1621.7961 LSD1-FL-His LSD1-FL-His 802 816 yes yes 3 0.0025924 54.343 By MS/MS By MS/MS By MS/MS 1 1 1 8032400 1985000 2157100 0 0 0 3890200 0 0 1395 24 1513 8017;8018;8019 6000 6000 1 11983000 12911000 0 0 0 5545500 0 0 GEIDIAKRIE MYMREMGTVELLTREGEIDIAKRIEDGINQ LLTREGEIDIAKRIEDGINQVQCSVAEYPE E G E I E D 1 1 0 1 0 0 2 1 0 3 0 1 0 0 0 0 0 0 0 0 0 0 10 2 1 1 1142.6295 P00579 P00579 115 124 rpoD RNA polymerase sigma factor RpoD yes yes 3 0.0069749 39.918 By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 25593000 2017900 0 4944500 7040200 0 0 5007700 6582600 1396 27 1514 8020;8021;8022;8023;8024 6001;6002 6001 2 31004000 0 42013000 53376000 0 0 38540000 37776000 GEIGEEER LGRIMNVLGEPVDMKGEIGEEERWAIHRAA GEPVDMKGEIGEEERWAIHRAAPSYEELSN K G E E R W 0 1 0 0 0 0 4 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8 0 4 0 917.40904 P0ABB4 P0ABB4 100 107 atpD ATP synthase subunit beta yes yes 2 0.0049136 61.962 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9167800 0 3015400 0 0 3479400 2673100 0 0 1397 194 1515 8025;8026;8027;8028 6003;6004;6005;6006 6004 4 0 3086500 0 0 4197200 2961100 0 0 GEILGGMAAVEQPEKPAAQPK HTTYGVIGVKVWIFKGEILGGMAAVEQPEK MAAVEQPEKPAAQPKKQQRKGRK_______ K G E P K K 4 0 0 0 0 2 3 3 0 1 1 2 1 0 3 0 0 0 0 1 0 0 21 1 3 7 2120.0936 P0A7V3 P0A7V3 205 225 rpsC 30S ribosomal protein S3 yes yes 2;3 9.0702E-53 137.61 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 3 353740000 66793000 72161000 0 0 91388000 123400000 0 0 1398 129 1516;1517 8029;8030;8031;8032;8033;8034;8035;8036;8037;8038;8039 6007;6008;6009;6010;6011;6012;6013;6014;6015;6016;6017 6016 125 11 66793000 73864000 0 0 110240000 136700000 0 0 GEIPGLK KFGLSRIKVREAAMRGEIPGLKKASW____ KVREAAMRGEIPGLKKASW___________ R G E L K K 0 0 0 0 0 0 1 2 0 1 1 1 0 0 1 0 0 0 0 0 0 0 7 0 1 1 712.41194 P0AG59 P0AG59 91 97 rpsN 30S ribosomal protein S14 yes yes 1;2 0.021107 46.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 349610000 75225000 89737000 0 0 92934000 91719000 0 0 1399 260 1518 8040;8041;8042;8043;8044;8045;8046;8047 6018;6019;6020 6018 3 75225000 91855000 0 0 112110000 101600000 0 0 GEIPGLKK KFGLSRIKVREAAMRGEIPGLKKASW____ VREAAMRGEIPGLKKASW____________ R G E K K A 0 0 0 0 0 0 1 2 0 1 1 2 0 0 1 0 0 0 0 0 0 0 8 1 1 1 840.5069 P0AG59 P0AG59 91 98 rpsN 30S ribosomal protein S14 yes yes 2 0.0057951 60.799 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 495500000 118690000 156770000 0 0 108640000 111390000 0 0 1400 260 1519 8048;8049;8050;8051 6021;6022 6021 2 118690000 160470000 0 0 131050000 123400000 0 0 GEKAFYGSVARLA AGYEISAIFTHTDNPGEKAFYGSVARLAAE NPGEKAFYGSVARLAAERGIPVYAPDNVNH P G E L A A 3 1 0 0 0 0 1 2 0 0 1 1 0 1 0 1 0 0 1 1 0 0 13 2 1 2 1367.7197 P77398 P77398 37 49 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 2.9821E-10 77.894 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 140560000 9192700 10997000 0 0 58510000 61864000 0 0 1401 432 1520 8052;8053;8054;8055;8056;8057;8058;8059 6023;6024;6025;6026;6027;6028;6029 6027 7 55492000 65818000 0 0 83300000 88187000 0 0 GELFVHRNVA SDSRVPAERLTGLEPGELFVHRNVANLVIH TGLEPGELFVHRNVANLVIHTDLNCLSVVQ P G E V A N 1 1 1 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 2 0 0 10 1 1 0 1140.604 P61517 P61517 58 67 can Carbonic anhydrase 2 yes yes 2;3 0.0015781 70.919 By MS/MS By MS/MS By matching By MS/MS 1 2 2 2 20320000 1281700 1977800 0 0 5865500 11195000 0 0 1402 386 1521 8060;8061;8062;8063;8064;8065;8066 6030;6031;6032 6031 1 7737300 11837000 0 0 8350700 15959000 0 0 GELITRYIE ESGWKWKYLVKKHREGELITRYIEASAAQE VKKHREGELITRYIEASAAQEAVDVLLSLE E G E I E A 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 0 1 0 1 0 0 0 9 1 1 0 1092.5815 P0A8N0 P0A8N0 25 33 matP Macrodomain Ter protein yes yes 2 0.020243 56.729 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 7506600 536470 0 0 1174900 1474100 1581800 874780 1864600 1403 149 1522 8067;8068;8069;8070;8071;8072 6033 6033 1 8242600 0 0 8907500 22695000 23975000 6732500 10700000 GELPYGEAANFDLVGQR GWWVVSHEQKLWLPKGELPYGEAANFDLVG LPYGEAANFDLVGQRALQIGEWQGEPVWLV K G E Q R A 2 1 1 1 0 1 2 3 0 0 2 0 0 1 1 0 0 0 1 1 0 0 17 0 2 3 1834.885 P32664 P32664 26 42 nudC NADH pyrophosphatase yes yes 2 2.0447E-99 188.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 185310000 46594000 40146000 0 0 52852000 45722000 0 0 1404 340 1523 8073;8074;8075;8076;8077 6034;6035;6036;6037 6034 4 46594000 41093000 0 0 105670000 50650000 0 0 GELRNFTGIDSVYEAP CEARDPKGLYKKARAGELRNFTGIDSVYEA ELRNFTGIDSVYEAPESAEIHLNGEQLVTN A G E A P E 1 1 1 1 0 0 2 2 0 1 1 0 0 1 1 1 1 0 1 1 0 0 16 1 2 1 1766.8475 P0A6J1 P0A6J1 154 169 cysC Adenylyl-sulfate kinase yes yes 2 0.0004529 70.089 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7448400 540050 562250 0 0 2431600 3914500 0 0 1405 73 1524 8078;8079;8080;8081 6038;6039 6039 2 3260100 3365100 0 0 3461800 5580100 0 0 GEQPLLAPLMR TERQQLAALIDSYRRGEQPLLAPLMRIKHY SYRRGEQPLLAPLMRIKHYMALYPDAWLSG R G E M R I 1 1 0 0 0 1 1 1 0 0 3 0 1 0 2 0 0 0 0 0 0 0 11 0 1 3 1223.6696 P24252 P24252 125 135 ybgA Uncharacterized protein YbgA yes yes 2 7.6445E-06 105.57 By matching By MS/MS By matching By MS/MS 1 1 1 1 59305000 12154000 12978000 0 0 15798000 18375000 0 0 1406 313 1525 8082;8083;8084;8085 6040;6041 6040 2 12154000 13284000 0 0 19058000 20355000 0 0 GEQVLAYPGTTLYSLEK IISTLRLDKLHVLGKGEQVLAYPGTTLYSL QVLAYPGTTLYSLEKALKPLGREPHSVIGS K G E E K A 1 0 0 0 0 1 2 2 0 0 3 1 0 0 1 1 2 0 2 1 0 0 17 0 2 2 1867.9567 P06149 P06149 113 129 dld D-lactate dehydrogenase yes yes 2 0.00031701 60.628 By MS/MS By MS/MS By MS/MS 1 1 1 10210000 0 0 0 0 2759100 7451200 0 0 1407 50 1526 8086;8087;8088 6042;6043;6044 6043 3 0 0 0 0 3328300 8254300 0 0 GESPVIR LGADAVIVHHGYFWKGESPVIRGMKRNRLK VHHGYFWKGESPVIRGMKRNRLKTLLANDI K G E I R G 0 1 0 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 7 0 1 1 756.413 P0AFP6 P0AFP6 70 76 ybgI Putative GTP cyclohydrolase 1 type 2 yes yes 2 0.0030133 75.311 By MS/MS By matching 1 1 6442800 0 4118000 0 0 2324800 0 0 0 1408 249 1527 8089;8090 6045 6045 1 0 4215200 0 0 2804400 0 0 0 GETPETHHYLMK QVGGILKYTRPAWWRGETPETHHYLMKKPG WWRGETPETHHYLMKKPGYYLSEEAYIARL R G E M K K 0 0 0 0 0 0 2 1 2 0 1 1 1 0 1 0 2 0 1 0 0 0 12 0 2 1 1441.666 P15723 P15723 220 231 dgt Deoxyguanosinetriphosphate triphosphohydrolase yes yes 3 0.0063208 36.32 By MS/MS By matching 1 1 6015100 2422100 3593000 0 0 0 0 0 0 1409 283 1528 8091;8092 6046 6046 1 2422100 3677800 0 0 0 0 0 0 GETQALVTATLGTAR TGVLPRTHGSALFTRGETQALVTATLGTAR GETQALVTATLGTARDAQVLDELMGERTDT R G E A R D 3 1 0 0 0 1 1 2 0 0 2 0 0 0 0 0 4 0 0 1 0 0 15 0 1 3 1487.7944 P05055 P05055 346 360 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 8.1812E-25 134.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40912000 8216800 7021200 0 0 12768000 12906000 0 0 1410 48 1529 8093;8094;8095;8096 6047;6048;6049;6050 6050 4 8216800 7187000 0 0 15402000 14297000 0 0 GETQLTPEEK EVTGGDILVGKVTPKGETQLTPEEKLLRAI KVTPKGETQLTPEEKLLRAIFGEKASDVKD K G E E K L 0 0 0 0 0 1 3 1 0 0 1 1 0 0 1 0 2 0 0 0 0 0 10 0 3 1 1130.5455 P0A8V2 P0A8V2 891 900 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 1.2388E-14 128.38 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 24473000 5412500 7702400 0 0 5838300 5520000 0 0 1411 154 1530 8097;8098;8099;8100 6051;6052;6053 6051 3 5412500 7884200 0 0 7042800 6114900 0 0 GEVVASTFDEPASR DERPEEVTEMQRLVKGEVVASTFDEPASRH KGEVVASTFDEPASRHVQVAEMVIEKAKRL K G E S R H 2 1 0 1 0 0 2 1 0 0 0 0 0 1 1 2 1 0 0 2 0 0 14 0 2 3 1463.6892 P0AG30 P0AG30 225 238 rho Transcription termination factor Rho yes yes 2 4.8946E-09 83.045 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 19945000 5619500 4949700 0 0 0 9376200 0 0 1412 256 1531 8101;8102;8103;8104 6054;6055;6056 6056 3 5619500 5066600 0 0 0 10387000 0 0 GFEGGQMPLYR GHKGQKSRSGGGVRRGFEGGQMPLYRRLPK GVRRGFEGGQMPLYRRLPKFGFTSRKAAIT R G F Y R R 0 1 0 0 0 1 1 3 0 0 1 0 1 1 1 0 0 0 1 0 0 0 11 0 1 1 1253.5863 P02413 P02413 49 59 rplO 50S ribosomal protein L15 yes yes 2 6.8369E-134 204.36 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 4362100000 967580000 1056300000 2032000 0 786580000 1549600000 0 0 1413 37 1532 8105;8106;8107;8108;8109 6057;6058;6059;6060;6061;6062;6063 6057 5 967580000 1081300000 17266000 0 948860000 1716600000 0 0 GFEGGQMPLYRR GHKGQKSRSGGGVRRGFEGGQMPLYRRLPK VRRGFEGGQMPLYRRLPKFGFTSRKAAITA R G F R R L 0 2 0 0 0 1 1 3 0 0 1 0 1 1 1 0 0 0 1 0 0 0 12 1 1 1 1409.6874 P02413 P02413 49 60 rplO 50S ribosomal protein L15 yes yes 3 0.011283 29.936 By MS/MS 1 339460000 0 339460000 0 0 0 0 0 0 1414 37 1533 8110 6064 6064 1 0 347470000 0 0 0 0 0 0 GFGHTLGNALR VSSTHAKVTLEPLERGFGHTLGNALRRILL PLERGFGHTLGNALRRILLSSMPGCAVTEV R G F L R R 1 1 1 0 0 0 0 3 1 0 2 0 0 1 0 0 1 0 0 0 0 0 11 0 0 1 1141.5992 P0A7Z4 P0A7Z4 34 44 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3 0.00034802 67.704 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35819000 9609100 8881800 0 0 9235200 8093100 0 0 1415 135 1534 8111;8112;8113;8114 6065;6066;6067;6068 6065 4 9609100 9091500 0 0 11140000 8965300 0 0 GFGIVGAYGAADRTNLQE SNGDGVGGSISYEYEGFGIVGAYGAADRTN IVGAYGAADRTNLQEAQPLGNGKKAEQWAT E G F Q E A 3 1 1 1 0 1 1 4 0 1 1 0 0 1 0 0 1 0 1 1 0 0 18 1 0 3 1837.8959 P02931 P02931 206 223 ompF Outer membrane protein F yes yes 2 5.4974E-25 103.88 By MS/MS By MS/MS By matching 1 1 1 10154000 0 0 0 0 8704300 0 0 1449300 1416 38 1535 8115;8116;8117 6069;6070 6069 2 0 0 0 0 134010000 0 0 8317000 GFHLVTDEILNQLADMPR ______________________________ LVTDEILNQLADMPRVNIGLLHLLLQHTSA R G F P R V 1 1 1 2 0 1 1 1 1 1 3 0 1 1 1 0 1 0 0 1 0 0 18 0 1 2 2068.0412 P0AF48 P0AF48 15 32 yjbQ UPF0047 protein YjbQ yes yes 3 8.0749E-53 148.03 By MS/MS By MS/MS By MS/MS 1 1 1 117420000 0 14256000 0 0 55259000 47908000 0 0 1417 243 1536 8118;8119;8120 6071;6072;6073 6072 2 0 14593000 0 0 66659000 53071000 0 0 GFNEEDFAR LMMGDALAMAVMQARGFNEEDFARSHPAGA AVMQARGFNEEDFARSHPAGALGARLLNKV R G F A R S 1 1 1 1 0 0 2 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 9 0 2 1 1083.4621 P17115 P17115 176 184 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 2 0.00018912 101.33 By MS/MS By MS/MS By matching 1 1 1 16681000 7354900 5476600 0 0 0 3849100 0 0 1418 287 1537 8121;8122;8123 6074;6075 6075 2 7354900 5605900 0 0 0 4263900 0 0 GFQSEVK ______________________________ ______________________________ R G F V K Q 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 7 0 1 0 793.39702 P0A6Z3 P0A6Z3 8 14 htpG Chaperone protein HtpG yes yes 2 0.003397 71.949 By matching By MS/MS By MS/MS 1 1 1 23476000 9454100 0 0 0 6400400 7621700 0 0 1419 88 1538 8124;8125;8126 6076;6077 6077 1 9454100 0 0 0 7720800 8443100 0 0 GFRITNITDVTP PGPGRESTIRALNAAGFRITNITDVTPIPH NAAGFRITNITDVTPIPHNGCRPPKKRRV_ A G F T P I 0 1 1 1 0 0 0 1 0 2 0 0 0 1 1 0 3 0 0 1 0 0 12 1 0 0 1332.7038 P0A7R9 P0A7R9 104 115 rpsK 30S ribosomal protein S11 yes yes 2 0.013865 52.79 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 33017000 2559600 2258600 790840 796770 9171900 17439000 0 0 1420 121 1539 8127;8128;8129;8130;8131;8132 6078 6078 1 15451000 13518000 6719600 6040700 13058000 24860000 0 0 GFRVVESSSYYGKGYQDVEHRKP SFEKHPLRHHFPPFAGFRVVESSSYYGKGY SYYGKGYQDVEHRKPSIRNAHRCLDWEPKI A G F K P S 0 2 0 1 0 1 2 3 1 0 0 2 0 1 1 3 0 0 3 3 0 0 23 4 2 0 2687.3092 P77398 P77398 599 621 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4;5 1.2525E-162 207.22 By MS/MS By MS/MS 2 2 313860000 0 0 0 0 237420000 76438000 0 0 1421 432 1540 8133;8134;8135;8136 6079;6080;6081;6082;6083;6084 6083 6 0 0 0 0 338020000 108960000 0 0 GFSSGSAVVSGGSR SCKSRGRGGGGGGFRGFSSGSAVVSGGSRR RGFSSGSAVVSGGSRRSTSSFSCLSRHGGG R G F S R R 1 1 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 0 14 0 0 1 1253.6 CON__P35908v2;CON__P35908 CON__P35908v2 21 34 no no 2 1.0273E-125 203.02 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 456520000 54710000 62418000 0 0 175670000 161030000 0 2692400 + 1422 16 1541 8137;8138;8139;8140;8141 6085;6086;6087;6088;6089;6090 6089 6 54710000 63891000 0 0 211910000 178390000 0 15451000 GFTLQQSAE YNEVHLHAPHAEQLEGFTLQQSAELCYPMR HAEQLEGFTLQQSAELCYPMRLRGDEAVAL E G F A E L 1 0 0 0 0 2 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 9 0 0 1 979.46108 P36999 P36999 207 215 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 1 2.0346E-74 177.97 By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 40975000 5506400 4815000 7875100 4373700 3863800 0 5456400 9084700 1423 352 1542 8142;8143;8144;8145;8146;8147;8148 6091 6091 1 84605000 73430000 66914000 33160000 59487000 0 41994000 52135000 GFVLGYSHR DSAVNVTKFCADYKRGFVLGYSHRMYEKTG CADYKRGFVLGYSHRMYEKTGDRQLSAWEA R G F H R M 0 1 0 0 0 0 0 2 1 0 1 0 0 1 0 1 0 0 1 1 0 0 9 0 0 0 1034.5298 P64574 P64574 34 42 yghW Uncharacterized protein YghW yes yes 2 2.873E-36 153.73 By MS/MS By MS/MS By MS/MS 1 1 1 146730000 46831000 0 0 0 43472000 56428000 0 0 1424 396 1543 8149;8150;8151 6092;6093;6094 6093 3 46831000 0 0 0 52441000 62510000 0 0 GFVSSDNMHIIEMP RARGGQLYVFADQDAGFVSSDNMHIIEMPH AGFVSSDNMHIIEMPHVEEVIAPIFYTVPL A G F M P H 0 0 1 1 0 0 1 1 1 2 0 0 2 1 1 2 0 0 0 1 0 0 14 0 1 0 1575.7061 P17169 P17169 553 566 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 7.4924E-17 108.67 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 4 105640000 4368000 8313800 0 0 38438000 54523000 0 0 1425 288 1544;1545;1546 8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163 6095;6096;6097;6098;6099;6100;6101 6095 241;242 7 26368000 49758000 0 0 54723000 77722000 0 0 GGAQGDLLCR GKLFRMRGKGVKSVRGGAQGDLLCRVVVET VKSVRGGAQGDLLCRVVVETPVGLNERQKQ R G G C R V 1 1 0 1 1 1 0 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 10 0 0 1 1045.4975 P08622 P08622 315 324 dnaJ Chaperone protein DnaJ yes yes 2 0.00022967 58.815 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25929000 0 10284000 0 0 8616100 7028200 0 0 1426 61 1547 8164;8165;8166;8167 6102;6103;6104;6105 6102 4 0 10527000 0 0 10394000 7785700 0 0 GGDGNYGYNAATEEYGNMIDMGILDPTK LNCGEEPSVVANTVKGGDGNYGYNAATEEY EYGNMIDMGILDPTKVTRSALQYAASVAGL K G G T K V 2 0 3 3 0 0 2 6 0 2 1 1 2 0 1 0 2 0 3 0 0 0 28 0 2 3 2965.2746 P0A6F5 P0A6F5 471 498 groL 60 kDa chaperonin yes yes 3 3.1222E-96 160.16 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 320040000 69633000 79426000 0 0 67155000 103820000 0 0 1427 68 1548;1549 8168;8169;8170;8171;8172;8173;8174;8175;8176;8177 6106;6107;6108;6109;6110;6111;6112;6113;6114 6114 81;82 9 69633000 81301000 0 0 81009000 115010000 0 0 GGDHSILGAQDVVHFAELHGLNSR LIFIAALFHDIAKGRGGDHSILGAQDVVHF QDVVHFAELHGLNSRETQLVAWLVRQHLLM R G G S R E 2 1 1 2 0 1 1 4 3 1 3 0 0 1 0 2 0 0 0 2 0 0 24 0 1 2 2528.252 P27249 P27249 521 544 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3;4;5 4.7973E-64 142.45 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 3 3 1 1 3 3 381560000 123070000 22698000 2389300 3906000 110040000 119460000 0 0 1428 320 1550 8178;8179;8180;8181;8182;8183;8184;8185;8186;8187;8188;8189;8190;8191 6115;6116;6117;6118;6119;6120;6121;6122;6123;6124;6125 6123 11 123070000 23234000 20302000 29613000 132740000 132340000 0 0 GGFESYQER INDNWPRETPPGPKRGGFESYQERVEGNKV PPGPKRGGFESYQERVEGNKVRERSPSFGE R G G E R V 0 1 0 0 0 1 2 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 2 0 1071.4621 P21179 P21179 480 488 katE Catalase HPII yes yes 2 4.9819E-05 106.36 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 61930000 12042000 9463900 0 0 23121000 17304000 0 0 1429 293 1551 8192;8193;8194;8195;8196 6126;6127;6128;6129 6127 4 13849000 9687300 0 0 27890000 19169000 0 0 GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR GGGGGFGAAGGFGGRGGGFGGGSSFGGGSG FSGGGFGGGGFGGGRFGGFGGPGGVGGLGG R G G G R F 0 1 0 0 0 0 0 20 0 0 0 0 0 5 0 4 0 0 0 0 0 0 30 0 0 0 2398.0111 CON__P35908v2 CON__P35908v2 93 122 yes yes 3 2.6611E-13 59.282 By matching By MS/MS 1 1 48036000 0 0 0 0 28835000 19201000 0 0 + 1430 16 1552 8197;8198 6130 6130 1 0 0 0 0 34784000 21270000 0 0 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR SVSTSHTTISGGGSRGGGGGGYGSGGSSYG GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG R G G G R G 0 1 0 0 0 0 0 21 0 0 0 0 0 0 0 6 0 0 3 0 0 0 31 0 0 0 2382.9446 CON__P04264 CON__P04264 519 549 yes yes 2;3 0 391.64 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 385640000 60917000 61775000 0 0 135810000 127140000 0 0 + 1431 9 1553 8199;8200;8201;8202;8203;8204;8205;8206;8207 6131;6132;6133;6134;6135;6136 6133 6 82186000 63233000 0 0 163830000 140840000 0 0 GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR SSSGYGGGSSRVCGRGGGGSFGYSYGGGSG FSASSLGGGFGGGSRGFGGASGGGYSSSGG R G G S R G 1 1 0 0 0 0 0 17 0 0 1 0 0 3 0 7 0 0 2 0 0 0 32 0 0 1 2704.1538 CON__P35527 CON__P35527 64 95 yes yes 3 1.1237E-25 73.975 By MS/MS By MS/MS 1 1 29129000 0 0 0 0 14733000 14397000 0 0 + 1432 15 1554 8208;8209 6137;6138;6139 6138 3 0 0 0 0 17772000 15948000 0 0 GGGISGQAGAIR LVDMVEKLDLYITVKGGGISGQAGAIRHGI TVKGGGISGQAGAIRHGITRALMEYDESLR K G G I R H 2 1 0 0 0 1 0 5 0 2 0 0 0 0 0 1 0 0 0 0 0 0 12 0 0 2 1042.552 P0A7X3 P0A7X3 69 80 rpsI 30S ribosomal protein S9 yes yes 2 7.5732E-14 98.033 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 547370000 126680000 151670000 0 0 129280000 139740000 0 0 1433 133 1555 8210;8211;8212;8213 6140;6141;6142 6140 0 126680000 155250000 0 0 155950000 154800000 0 0 GGGMDEMWLSK VTVDGSEHVYPMQIRGGGMDEMWLSKTERT MQIRGGGMDEMWLSKTERT___________ R G G S K T 0 0 0 1 0 0 1 3 0 0 1 1 2 0 0 1 0 1 0 0 0 0 11 0 1 0 1209.5158 P00893 P00893 560 570 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 0.00038423 71.451 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70599000 18065000 20094000 0 0 15452000 16989000 0 0 1434 29 1556 8214;8215;8216;8217 6143;6144;6145;6146 6145 4 18065000 20568000 0 0 18640000 18820000 0 0 GGGRPDMAQAGGTDAAALPAALASVK AGELIGMVAQQVGGKGGGRPDMAQAGGTDA GTDAAALPAALASVKGWVSAKLQ_______ K G G V K G 8 1 0 2 0 1 0 5 0 0 2 1 1 0 2 1 1 0 0 1 0 0 26 1 0 10 2352.1856 P00957 P00957 843 868 alaS Alanine--tRNA ligase yes yes 3 0.018775 21.619 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27934000 7099600 6351200 0 0 5160800 9322100 0 0 1435 33 1557 8218;8219;8220;8221 6147 6147 1 7099600 6501100 0 0 6225400 10327000 0 0 GGGTSSNYHHGSSAQNTSAQQDSEETE TVVPSRPVSHHSNNAGGGTSSNYHHGSSAQ SAQNTSAQQDSEETE_______________ A G G T E - 2 0 2 1 0 3 3 4 2 0 0 0 0 0 0 6 3 0 1 0 0 0 27 0 2 2 2765.1033 P0A6X3 P0A6X3 76 102 hfq RNA-binding protein Hfq yes yes 3 0.0010485 44.258 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 16917000 4978900 7001100 0 0 585590 4351100 0 0 1436 84 1558 8222;8223;8224;8225;8226;8227;8228 6148 6148 1 34410000 47663000 0 0 9015700 19226000 0 0 GGHLDDEQSPDWLFTR GRSLLAMGCGAVLMKGGHLDDEQSPDWLFT GHLDDEQSPDWLFTREGEQRFTAPRIMTKN K G G T R E 0 1 0 3 0 1 1 2 1 0 2 0 0 1 1 1 1 1 0 0 0 0 16 0 1 1 1871.8438 P76422 P76422 177 192 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2;3 2.5083E-134 241.51 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 628200000 174820000 151000000 0 0 123020000 179370000 0 0 1437 425 1559 8229;8230;8231;8232;8233;8234;8235;8236 6149;6150;6151;6152;6153;6154;6155;6156;6157 6153 9 174820000 154560000 0 0 148400000 198700000 0 0 GGHSHRRILHAADATGREVE HIQPNGEESYHLTREGGHSHRRILHAADAT RRILHAADATGREVETTLVSKALNHPNIRV E G G V E T 3 3 0 1 0 0 2 3 3 1 1 0 0 0 0 1 1 0 0 1 0 0 20 3 1 3 2168.0947 P10902 P10902 122 141 nadB L-aspartate oxidase yes yes 4 2.2905E-14 68.567 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 2 1 2 61353000 8730000 9958600 10222000 5921600 5818200 5029800 15674000 0 1438 274 1560 8237;8238;8239;8240;8241;8242;8243;8244;8245;8246;8247 6158;6159;6160;6161;6162;6163;6164 6158 6 134130000 151870000 86851000 44895000 89576000 76235000 120630000 0 GGIYTPALRE GEQERLQLALKVLREGGIYTPALREIESYD KVLREGGIYTPALREIESYDAVLVLGEDVT E G G R E I 1 1 0 0 0 0 1 2 0 1 1 0 0 0 1 0 1 0 1 0 0 0 10 1 0 2 1075.5662 P33602 P33602 359 368 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.013136 48.283 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 54706000 4697400 4746900 12955000 13726000 2401700 2504600 13675000 0 1439 345 1561 8248;8249;8250;8251;8252;8253;8254 6165;6166;6167 6166 3 72174000 72391000 110070000 104070000 36976000 37961000 105240000 0 GGKKQIALTE DFLQEQSLITIREEEGGKKQIALTEQGAQW IREEEGGKKQIALTEQGAQWLEENREQVEM E G G T E Q 1 0 0 0 0 1 1 2 0 1 1 2 0 0 0 0 1 0 0 0 0 0 10 2 0 1 1043.5975 P64588 P64588 120 129 yqjI Transcriptional regulator YqjI yes yes 2 0.00026845 93.429 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 651600000 46083000 45214000 104240000 110520000 20857000 24424000 138080000 162190000 1440 398 1562 8255;8256;8257;8258;8259;8260;8261;8262;8263 6168;6169;6170;6171;6172 6171 5 708050000 689520000 885690000 837890000 321110000 356450000 1062700000 930810000 GGKSVFE NQFDDAGIVTRHNFEGGKSVFELTQQHHHD IVTRHNFEGGKSVFELTQQHHHDHLICLDC E G G F E L 0 0 0 0 0 0 1 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 7 1 0 0 722.3599 P0A9A9 P0A9A9 75 81 fur Ferric uptake regulation protein yes yes 2 9.1304E-05 88.029 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 382650000 115270000 118720000 0 0 75248000 73419000 0 0 1441 162 1563 8264;8265;8266;8267 6173;6174;6175;6176 6174 2 1771000000 1810500000 0 0 1158500000 1112800000 0 0 GGLHQIE IDSQSASKLIPAAVEGGLHQIETASGAVLK KLIPAAVEGGLHQIETASGAVLKARSIIVA E G G I E T 0 0 0 0 0 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 752.3817 P35340 P35340 300 306 ahpF Alkyl hydroperoxide reductase subunit F yes yes 1 0.016737 63.148 By matching By MS/MS By matching By matching By matching By matching By matching By matching 1 1 1 1 1 1 1 1 57571000 11033000 10722000 6003400 4244000 5342400 4204200 7892700 8129400 1442 348 1564 8268;8269;8270;8271;8272;8273;8274;8275 6177 6177 0 169520000 163510000 51010000 32176000 82251000 63721000 60744000 46653000 GGLHTVVDSTTLSR LNGCTWLPVSWARKKGGLHTVVDSTTLSRP KGGLHTVVDSTTLSRPLYAIWLQNSDKNAL K G G S R P 0 1 0 1 0 0 0 2 1 0 2 0 0 0 0 2 3 0 0 2 0 0 14 0 0 0 1441.7525 P0A8R9 P0A8R9 237 250 hdfR HTH-type transcriptional regulator HdfR yes yes 2;3 1.4597E-76 175.86 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 236250000 70202000 57155000 0 0 47836000 61056000 0 0 1443 152 1565 8276;8277;8278;8279;8280;8281;8282;8283 6178;6179;6180;6181;6182;6183;6184;6185 6179 8 70202000 58504000 0 0 57705000 67636000 0 0 GGLLLAGHTDTVP TRNKFNMLASIGQGAGGLLLAGHTDTVPFD GAGGLLLAGHTDTVPFDDGRWTRDPFTLTE A G G V P F 1 0 0 1 0 0 0 3 1 0 3 0 0 0 1 0 2 0 0 1 0 0 13 0 0 1 1249.6667 P23908 P23908 73 85 argE Acetylornithine deacetylase yes yes 2 8.9501E-07 83.265 By MS/MS 1 13839000 0 0 0 0 0 13839000 0 0 1444 308 1566 8284 6186 6186 1 0 0 0 0 0 19728000 0 0 GGNVVRFAP ISQEAAKAGVMVLIAGGNVVRFAPALNVSE VMVLIAGGNVVRFAPALNVSEEEVTTGLDR A G G A P A 1 1 1 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 9 1 0 1 915.49265 P77581 P77581 369 377 astC Succinylornithine transaminase yes yes 2 0.0041517 72.138 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 25464000 3781900 5313800 0 0 6051900 4637100 5679400 0 1445 437 1567 8285;8286;8287;8288;8289;8290;8291;8292;8293 6187;6188 6188 1 47976000 68162000 0 0 37294000 34621000 43710000 0 GGQEDFE MRLEKEIETYHNLLEGGQEDFESSGAGKIG ETYHNLLEGGQEDFESSGAGKIGLGGRGGS E G G F E S 0 0 0 1 0 1 2 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 7 0 1 0 780.29261 CON__P35527 CON__P35527 460 466 yes yes 1 0.0015564 76.847 By matching By MS/MS By matching By matching 1 1 1 1 7287100 2587900 2717100 0 0 781050 1201100 0 0 + 1446 15 1568 8294;8295;8296;8297 6189 6189 0 39762000 41436000 0 0 12025000 18204000 0 0 GGSGGGGSISGGGYGSGGGSGGR GSSSYGSGGRQSGSRGGSGGGGSISGGGYG ISGGGYGSGGGSGGRYGSGGGSKGGSISGG R G G G R Y 0 1 0 0 0 0 0 15 0 1 0 0 0 0 0 5 0 0 1 0 0 0 23 0 0 0 1740.7412 CON__P35908v2;CON__P35908 CON__P35908v2 550 572 yes no 2 3.4894E-274 246.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 111720000 22709000 27870000 0 0 25905000 35241000 0 0 + 1447 16 1569 8298;8299;8300;8301 6190;6191;6192;6193 6190 4 22709000 28527000 0 0 31250000 39039000 0 0 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK GGGSGGGYGGGSGSRGGSGGSHGGGSGFGG EASGSGGGYGGGSGKSSHS___________ R G G G K S 1 0 0 0 0 0 3 23 1 0 0 1 0 1 0 8 0 0 2 0 0 0 40 0 3 1 3222.2743 CON__P35527 CON__P35527 580 619 yes yes 3 4.1851E-207 207.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 323340000 48360000 70925000 0 0 106450000 97598000 0 0 + 1448 15 1570 8302;8303;8304;8305 6194;6195;6196;6197 6195 4 48360000 72599000 0 0 128410000 108120000 0 0 GGSGGSYGGGGSGGGYGGGSGSR GGRGGSGGSYGRGSRGGSGGSYGGGGSGGG GGGSGGGYGGGSGSRGGSGGSYGGGSGSGG R G G S R G 0 1 0 0 0 0 0 15 0 0 0 0 0 0 0 5 0 0 2 0 0 0 23 0 0 0 1790.7204 CON__P35527 CON__P35527 491 513 yes yes 2 6.0027E-87 171.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 366670000 86009000 86858000 0 0 95621000 98179000 0 0 + 1449 15 1571 8306;8307;8308;8309;8310;8311;8312 6198;6199;6200;6201 6199 4 110220000 207420000 0 0 115350000 118140000 0 0 GGSISGGGYGSGGGK GGGSGGRYGSGGGSKGGSISGGGYGSGGGK GGSISGGGYGSGGGKHSSGGGSRGGSSSGG K G G G K H 0 0 0 0 0 0 0 9 0 1 0 1 0 0 0 3 0 0 1 0 0 0 15 0 0 0 1196.5422 CON__P35908v2;CON__P35908 CON__P35908v2 581 595 yes no 2 2.4507E-11 91.961 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 126690000 22476000 23106000 0 0 33568000 47539000 0 0 + 1450 16 1572 8313;8314;8315;8316 6202;6203;6204;6205 6203 4 22476000 23651000 0 0 40493000 52662000 0 0 GGSPVPYDR TGRETRATVLGHIQRGGSPVPYDRILASRM LGHIQRGGSPVPYDRILASRMGAYAIDLLL R G G D R I 0 1 0 1 0 0 0 2 0 0 0 0 0 0 2 1 0 0 1 1 0 0 9 0 0 2 946.45084 P0A796 P0A796 254 262 pfkA ATP-dependent 6-phosphofructokinase isozyme 1 yes yes 2 0.0053314 38.086 By MS/MS 1 0 0 0 0 0 0 0 0 0 1451 98 1573 8317 6206 6206 1 0 0 0 0 0 0 0 0 GGSSSGGGYGSGGGGSSSVK YGSGGGKHSSGGGSRGGSSSGGGYGSGGGG GGGYGSGGGGSSSVKGSSGEAFGSSVTFSF R G G V K G 0 0 0 0 0 0 0 10 0 0 0 1 0 0 0 7 0 0 1 1 0 0 20 0 0 0 1587.6761 CON__P35908v2;CON__P35908 CON__P35908v2 604 623 yes no 2 3.2602E-08 76.262 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38021000 8182000 7600800 0 0 11373000 10865000 0 0 + 1452 16 1574 8318;8319;8320;8321 6207;6208;6209;6210 6210 4 8182000 7780200 0 0 13720000 12036000 0 0 GGTLRSHNSGIIGP AHILYHNPRFEVMVPGGTLRSHNSGIIGPS PGGTLRSHNSGIIGPSAASFVADFRADYLV P G G G P S 0 1 1 0 0 0 0 4 1 2 1 0 0 0 1 2 1 0 0 0 0 0 14 1 0 0 1364.7161 P32144 P32144 146 159 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 3 0.0015351 72.958 By MS/MS By MS/MS By MS/MS 1 1 1 4783600 0 487700 0 0 4295900 0 0 0 1453 339 1575 8322;8323;8324 6211;6212 6212 2 0 2918900 0 0 6116000 0 0 0 GGTLYGLQVLERIEA AQAKSPHVAALGSEAGGTLYGLQVLERIEA GGTLYGLQVLERIEANQRQNFTRFVVLARK A G G E A N 1 1 0 0 0 1 2 3 0 1 3 0 0 0 0 0 1 0 1 1 0 0 15 1 2 0 1617.8726 P0A9J8 P0A9J8 257 271 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.0015405 62.408 By MS/MS By MS/MS 1 1 6604600 0 0 0 0 3765000 2839500 0 0 1454 166 1576 8325;8326 6213 6213 1 0 0 0 0 5360200 4047800 0 0 GGVDVLVATPGR VFGGVSINPQMMKLRGGVDVLVATPGRLLD KLRGGVDVLVATPGRLLDLEHQNAVKLDQV R G G G R L 1 1 0 1 0 0 0 3 0 0 1 0 0 0 1 0 1 0 0 3 0 0 12 0 0 2 1139.6299 P25888 P25888 124 135 rhlE ATP-dependent RNA helicase RhlE yes yes 2 9.403E-08 123.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 339730000 96534000 80921000 0 0 85744000 76531000 0 0 1455 318 1577 8327;8328;8329;8330;8331 6214;6215;6216;6217;6218 6218 5 96534000 82831000 0 0 103430000 84779000 0 0 GGVIPGEYIPAVDK PGSNPKGYEFINDIKGGVIPGEYIPAVDKG KGGVIPGEYIPAVDKGIQEQLKAGPLAGYP K G G D K G 1 0 0 1 0 0 1 3 0 2 0 1 0 0 2 0 0 0 1 2 0 0 14 0 1 3 1413.7504 P0A6M8 P0A6M8 542 555 fusA Elongation factor G yes yes 2 0.0059968 48.004 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29266000 6539900 6425400 0 0 6859900 9441200 0 0 1456 76 1578 8332;8333;8334;8335 6219;6220 6219 2 6539900 6577000 0 0 8275100 10459000 0 0 GGVNDLESVVK NIIGVGSCPSRGMDKGGVNDLESVVKCVQR GMDKGGVNDLESVVKCVQRAIDQAELMADC K G G V K C 0 0 1 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 0 3 0 0 11 0 1 0 1115.5823 P0ABH0 P0ABH0 49 59 ftsA Cell division protein FtsA yes yes 2 3.0235E-17 132.84 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 288210000 66115000 65250000 0 0 66766000 90077000 0 0 1457 199 1579 8336;8337;8338;8339 6221;6222;6223 6222 3 66115000 66790000 0 0 80540000 99785000 0 0 GGVVDLNTLKAANIIGIQIE AITAEIRLSDLAKVEGGVVDLNTLKAANII LNTLKAANIIGIQIEFAKVILAGEVTTPVT E G G I E F 2 0 2 1 0 1 1 3 0 4 2 1 0 0 0 0 1 0 0 2 0 0 20 1 0 2 2037.147 P02413 P02413 87 106 rplO 50S ribosomal protein L15 yes yes 2 4.9157E-36 116.19 By MS/MS By MS/MS 1 1 56571000 0 0 0 0 35764000 20807000 0 0 1458 37 1580 8340;8341 6224;6225 6225 2 0 0 0 0 550610000 315370000 0 0 GGVVPASNAFLQGLRE DDSTCAVIVEPIQGEGGVVPASNAFLQGLR GVVPASNAFLQGLRELCNRHNALLIFDEVQ E G G R E L 2 1 1 0 0 1 1 3 0 0 2 0 0 1 1 1 0 0 0 2 0 0 16 1 0 3 1613.8526 P77581 P77581 196 211 astC Succinylornithine transaminase yes yes 2 3.7031E-07 73.624 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 16300000 1245900 1307500 2389000 1909300 1238500 2654600 3537800 2017800 1459 437 1581 8342;8343;8344;8345;8346;8347;8348;8349 6226;6227;6228;6229 6228 4 19142000 19939000 20299000 14475000 19068000 40234000 27228000 11580000 GGYLLNKHGE IAGAGVLVTEGCRGEGGYLLNKHGERFMER GCRGEGGYLLNKHGERFMERYAPNAKDLAG E G G G E R 0 0 1 0 0 0 1 3 1 0 2 1 0 0 0 0 0 0 1 0 0 0 10 1 0 0 1086.5458 P0AC41 P0AC41 261 270 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2;3 0.0013766 69.598 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 2 93800000 3839400 12639000 24506000 22392000 0 696430 11689000 18038000 1460 203 1582 8350;8351;8352;8353;8354;8355;8356;8357;8358;8359;8360;8361 6230;6231;6232;6233;6234;6235 6234 6 58992000 192750000 208220000 169770000 0 10555000 89959000 103520000 GGYLLNKHGERFME IAGAGVLVTEGCRGEGGYLLNKHGERFMER EGGYLLNKHGERFMERYAPNAKDLAGRDVV E G G M E R 0 1 1 0 0 0 2 3 1 0 2 1 1 1 0 0 0 0 1 0 0 0 14 2 1 0 1649.7984 P0AC41 P0AC41 261 274 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 0.00019607 62.042 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 3 1 1 2 122100000 12504000 7416600 20203000 35497000 15508000 2737600 11277000 16951000 1461 203 1583;1584 8362;8363;8364;8365;8366;8367;8368;8369;8370;8371;8372;8373 6236;6237;6238;6239;6240;6241;6242;6243;6244 6237 181 9 192130000 113100000 171660000 269120000 196840000 41493000 86791000 97282000 GHEDYQIVGNQR VMQAKENDVVLVAGKGHEDYQIVGNQRLDY AGKGHEDYQIVGNQRLDYSDRVTVARLLGV K G H Q R L 0 1 1 1 0 2 1 2 1 1 0 0 0 0 0 0 0 0 1 1 0 0 12 0 1 0 1414.6589 P22188 P22188 467 478 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase yes yes 3 0.0054678 28.903 By matching By MS/MS By matching 1 1 1 4887700 0 1777800 0 0 1764800 1345000 0 0 1462 299 1585 8374;8375;8376 6245 6245 1 0 1819800 0 0 2128900 1490000 0 0 GHEVGDKFDVAVGANDAYGQYDE HGHGSLISGLETALEGHEVGDKFDVAVGAN DVAVGANDAYGQYDENLVQRVPKDVFMGVD E G H D E N 3 0 1 4 0 1 2 4 1 0 0 1 0 1 0 0 0 0 2 3 0 0 23 1 1 3 2455.0564 P0A9K9 P0A9K9 51 73 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 9.75E-08 58.712 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 738910000 3682700 3158800 4213600 7735200 278730000 325890000 16099000 99397000 1463 169 1586 8377;8378;8379;8380;8381;8382;8383;8384 6246;6247;6248;6249;6250;6251 6250 6 56584000 48172000 35802000 58645000 4291300000 4939400000 123900000 570420000 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDE HGHGSLISGLETALEGHEVGDKFDVAVGAN LVQRVPKDVFMGVDELQVGMRFLAETDQGP E G H D E L 3 1 2 6 0 2 3 5 1 0 1 2 1 2 1 0 0 0 2 7 0 0 39 3 2 4 4281.9913 P0A9K9 P0A9K9 51 89 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 4;5 0 287.21 By MS/MS By MS/MS 6 5 4243500000 0 0 0 0 1867300000 2376200000 0 0 1464 169 1587;1588 8385;8386;8387;8388;8389;8390;8391;8392;8393;8394;8395 6252;6253;6254;6255;6256;6257;6258;6259;6260;6261;6262;6263;6264;6265;6266;6267;6268 6260 160 17 0 0 0 0 28744000000 36015000000 0 0 GHISNAIR IIGEPTSLQPVRAHKGHISNAIRIQGQSGH QPVRAHKGHISNAIRIQGQSGHSSDPARGV K G H I R I 1 1 1 0 0 0 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 0 1 866.47225 P23908 P23908 181 188 argE Acetylornithine deacetylase yes yes 2 2.4683E-34 153.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 316920000 109610000 74256000 0 0 76098000 56952000 0 0 1465 308 1589 8396;8397;8398;8399 6269;6270;6271;6272 6272 4 109610000 76009000 0 0 91797000 63090000 0 0 GHQHANLDPLGLWQQDK KQVKVLQLINAYRFRGHQHANLDPLGLWQQ QHANLDPLGLWQQDKVADLDPSFHDLTEAD R G H D K V 1 0 1 2 0 3 0 2 2 0 3 1 0 0 1 0 0 1 0 0 0 0 17 0 0 2 1955.9602 P0AFG3 P0AFG3 103 119 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3;4 1.5322E-44 122.14 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 142490000 59482000 38447000 0 0 33314000 11250000 0 0 1466 246 1590 8400;8401;8402;8403;8404;8405;8406;8407 6273;6274;6275;6276;6277;6278;6279;6280;6281 6281 9 59482000 39354000 0 0 40187000 12462000 0 0 GHVYIAQPPLYK LLTFFYRQMPEIVERGHVYIAQPPLYKVKK VERGHVYIAQPPLYKVKKGKQEQYIKDDEA R G H Y K V 1 0 0 0 0 1 0 1 1 1 1 1 0 0 2 0 0 0 2 1 0 0 12 0 0 3 1384.7503 P0AES6 P0AES6 525 536 gyrB DNA gyrase subunit B yes yes 2;3 1.4147E-13 135.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 126560000 29247000 27708000 0 0 28298000 41307000 0 0 1467 239 1591 8408;8409;8410;8411;8412;8413;8414;8415 6282;6283;6284;6285;6286;6287;6288;6289 6289 8 29247000 28362000 0 0 34136000 45759000 0 0 GHYTFSVK TVDWHVVSVDGHKTKGHYTFSVK_______ VDGHKTKGHYTFSVK_______________ K G H V K - 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 1 1 0 0 8 0 0 0 937.46577 P0AA57 P0AA57 117 124 yobA Protein YobA yes yes 2 1.3734E-45 166.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1694100000 558630000 507180000 0 0 376040000 252240000 0 0 1468 184 1592 8416;8417;8418;8419 6290;6291;6292;6293;6294 6291 5 558630000 519150000 0 0 453610000 279420000 0 0 GIANGGRGVDTTDA PAAIRGNASEIMALAGIANGGRGVDTTDAA AGIANGGRGVDTTDAAANAIPAAQTLARET A G I D A A 2 1 1 2 0 0 0 4 0 1 0 0 0 0 0 0 2 0 0 1 0 0 14 1 0 1 1302.6164 P76423 P76423 136 149 thiM Hydroxyethylthiazole kinase yes yes 2 4.714E-69 169.65 By MS/MS By MS/MS By MS/MS 1 1 1 129520000 26695000 19128000 0 0 0 83698000 0 0 1469 426 1593 8420;8421;8422 6295;6296;6297 6297 3 161140000 114480000 0 0 0 119310000 0 0 GIDKAVTAAVEELK LKAVAAGMNPMDLKRGIDKAVTAAVEELKA RGIDKAVTAAVEELKALSVPCSDSKAIAQV R G I L K A 3 0 0 1 0 0 2 1 0 1 1 2 0 0 0 0 1 0 0 2 0 0 14 1 2 3 1442.7981 P0A6F5 P0A6F5 119 132 groL 60 kDa chaperonin yes yes 2;3 1.9755E-23 106.14 By MS/MS By MS/MS 2 2 35565000 18018000 17547000 0 0 0 0 0 0 1470 68 1594 8423;8424;8425;8426 6298;6299;6300 6299 3 18018000 17961000 0 0 0 0 0 0 GIDTVLAELR TLRVSAKGMRVIDKKGIDTVLAELRARGEK VIDKKGIDTVLAELRARGEKY_________ K G I L R A 1 1 0 1 0 0 1 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 1 1 1085.6081 P0A7M2 P0A7M2 63 72 rpmB 50S ribosomal protein L28 yes yes 2 1.1756E-48 164.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 185130000 41888000 49620000 0 0 45153000 48474000 0 0 1471 113 1595 8427;8428;8429;8430 6301;6302;6303;6304 6304 4 41888000 50791000 0 0 54469000 53698000 0 0 GIEVLLLSDR AAAKSSPHLELLRKKGIEVLLLSDRIDEWM LLRKKGIEVLLLSDRIDEWMMNYLTEFDGK K G I D R I 0 1 0 1 0 0 1 1 0 1 3 0 0 0 0 1 0 0 0 1 0 0 10 0 1 0 1113.6394 P0A6Z3 P0A6Z3 454 463 htpG Chaperone protein HtpG yes yes 2 4.9974E-07 110.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22418000 4907100 5881300 0 0 5265900 6363500 0 0 1472 88 1596 8431;8432;8433;8434 6305;6306;6307;6308 6305 4 4907100 6020100 0 0 6352300 7049300 0 0 GIFGSSAVPQPK ISDDVIVGRCLAILKGIFGSSAVPQPKETV ILKGIFGSSAVPQPKETVVSRWRADPWARG K G I P K E 1 0 0 0 0 1 0 2 0 1 0 1 0 1 2 2 0 0 0 1 0 0 12 0 0 3 1186.6346 LSD1-FL-His LSD1-FL-His 735 746 yes yes 2 4.4263E-84 182.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22213000000 6428400000 5147500000 0 0 5022500000 5615000000 0 0 1473 24 1597 8435;8436;8437;8438 6309;6310;6311;6312;6313;6314 6311 6 6428400000 5269000000 0 0 6058600000 6220100000 0 0 GIGALYVR VDLMSFSGHKIYGPKGIGALYVRRKPRVRI HKIYGPKGIGALYVRRKPRVRIEAQMHGGG K G I V R R 1 1 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 1 1 0 0 8 0 0 1 847.49159 P0A6B7 P0A6B7 212 219 iscS Cysteine desulfurase IscS yes yes 2 0.0029316 72.021 By MS/MS By MS/MS 1 1 14784000 7396200 0 0 0 0 7388200 0 0 1474 67 1598 8439;8440 6315;6316 6315 2 7396200 0 0 0 0 8184500 0 0 GIGFGDYGDTHVRFA FAKKLLNEAKVCVSPGIGFGDYGDTHVRFA GIGFGDYGDTHVRFALIENRDRIRQAIRGI P G I F A L 1 1 0 2 0 0 0 4 1 1 0 0 0 2 0 0 1 0 1 1 0 0 15 1 0 0 1610.7478 P77434 P77434 361 375 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 3 0.0079834 23.481 By MS/MS By MS/MS 1 1 3719800 0 0 0 0 2750000 969740 0 0 1475 433 1599 8441;8442 6317 6317 1 0 0 0 0 3915200 1382400 0 0 GIGLTHALADVSGLAFDR ATLIRLFIHPVKSMRGIGLTHALADVSGLA LTHALADVSGLAFDRIFMITEPDGTFITAR R G I D R I 3 1 0 2 0 0 0 3 1 1 3 0 0 1 0 1 1 0 0 1 0 0 18 0 0 3 1811.953 P75863 P75863 17 34 ycbX Uncharacterized protein YcbX yes yes 3 0.018059 23.1 By matching By MS/MS 1 1 7448800 0 0 0 0 3660000 3788700 0 0 1476 411 1600 8443;8444 6318 6318 1 0 0 0 0 4415100 4197100 0 0 GIKDVVTQPQA IDCLAPDRRVEIEVKGIKDVVTQPQA____ IEVKGIKDVVTQPQA_______________ K G I Q A - 1 0 0 1 0 2 0 1 0 1 0 1 0 0 1 0 1 0 0 2 0 0 11 1 0 1 1154.6295 P0A910 P0A910 336 346 ompA Outer membrane protein A yes yes 2 3.5693E-05 103.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54008000 11810000 12415000 0 0 13775000 16008000 0 0 1477 158 1601 8445;8446;8447;8448 6319;6320;6321;6322 6319 4 11810000 12708000 0 0 16616000 17733000 0 0 GIKVSGDRHEYLIP RLAQHPYDRAVILNAGIKVSGDRHEYLIPF AGIKVSGDRHEYLIPFNQLLAIHCKRGLVW A G I I P F 0 1 0 1 0 0 1 2 1 2 1 1 0 0 1 1 0 0 1 1 0 0 14 2 1 0 1582.8467 P15038 P15038 26 39 helD Helicase IV yes yes 3 0.014629 28.632 By matching By matching By MS/MS 1 1 1 4435400 232990 0 0 0 1411500 2790900 0 0 1478 281 1602 8449;8450;8451 6323 6323 1 1406500 0 0 0 2009600 3978400 0 0 GILDSFK NQTGGYNDEIEGKLKGILDSFKATQSW___ DEIEGKLKGILDSFKATQSW__________ K G I F K A 0 0 0 1 0 0 0 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 7 0 0 0 778.4225 P0ABB0 P0ABB0 502 508 atpA ATP synthase subunit alpha yes yes 2 0.0030133 75.311 By MS/MS By MS/MS By MS/MS 1 1 1 16801000 0 3671200 0 0 7317700 5812600 0 0 1479 193 1603 8452;8453;8454 6324;6325;6326 6326 3 0 3757800 0 0 8827300 6439100 0 0 GILEQYGHK DGVKPPKKETMERVKGILEQYGHKVMF___ TMERVKGILEQYGHKVMF____________ K G I H K V 0 0 0 0 0 1 1 2 1 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1 0 1043.54 P0A9N4 P0A9N4 235 243 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 7.9942E-07 114.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 160740000 43805000 42910000 0 0 42303000 31722000 0 0 1480 171 1604 8455;8456;8457;8458 6327;6328;6329;6330 6327 4 43805000 43923000 0 0 51030000 35141000 0 0 GILTEGHLISVR ______________________________ FARGILTEGHLISVRLPSQCHQEARNIPPH R G I V R L 0 1 0 0 0 0 1 2 1 2 2 0 0 0 0 1 1 0 0 1 0 0 12 0 1 0 1293.7405 P0ADM8 P0ADM8 8 19 yieE Uncharacterized protein YieE yes yes 3 0.0031501 34.75 By MS/MS By MS/MS By matching 1 1 1 13469000 0 9017400 0 0 0 4451800 0 0 1481 223 1605 8459;8460;8461 6331;6332 6332 2 0 9230200 0 0 0 4931600 0 0 GIMENISDDVIVGRCLA YKAPILLALVAGEAAGIMENISDDVIVGRC MENISDDVIVGRCLAILKGIFGSSAVPQPK A G I L A I 1 1 1 2 1 0 1 2 0 3 1 0 1 0 0 1 0 0 0 2 0 0 17 1 1 0 1860.9074 LSD1-FL-His LSD1-FL-His 715 731 yes yes 2 9.7626E-09 76.655 By MS/MS 1 2416800 0 0 0 0 0 2416800 0 0 1482 24 1606 8462 6333 6333 1 0 0 0 0 0 3445100 0 0 GINLVKKHQKPVPALNQPGGIVE GKVKNVLSSGKVIVEGINLVKKHQKPVPAL QKPVPALNQPGGIVEKEAAIQVSNVAIFNA E G I V E K 1 0 2 0 0 2 1 3 1 2 2 3 0 0 3 0 0 0 0 3 0 0 23 3 0 4 2435.4013 P60624 P60624 38 60 rplX 50S ribosomal protein L24 yes yes 3;4 7.0187E-12 71.742 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 255700000 24309000 24367000 37396000 39253000 15062000 14243000 33044000 68022000 1483 381 1607 8463;8464;8465;8466;8467;8468;8469;8470;8471;8472;8473;8474;8475;8476;8477;8478 6334;6335;6336;6337;6338;6339;6340;6341;6342;6343;6344;6345;6346;6347 6334 14 373500000 371600000 317750000 297600000 231890000 215880000 254310000 390370000 GINLVKKHQKPVPALNQPGGIVEKE GKVKNVLSSGKVIVEGINLVKKHQKPVPAL PVPALNQPGGIVEKEAAIQVSNVAIFNAAT E G I K E A 1 0 2 0 0 2 2 3 1 2 2 4 0 0 3 0 0 0 0 3 0 0 25 4 1 4 2692.5388 P60624 P60624 38 62 rplX 50S ribosomal protein L24 yes yes 4;5 2.0939E-07 66.871 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 2 1 440860000 16916000 18002000 75620000 79454000 28326000 27907000 72059000 122580000 1484 381 1608 8479;8480;8481;8482;8483;8484;8485;8486;8487;8488;8489;8490;8491 6348;6349;6350;6351;6352;6353;6354;6355;6356;6357;6358;6359 6351 12 259900000 274530000 642530000 602390000 436100000 422980000 554580000 703440000 GIPTGIHPEEGVSAAEVIMTVLHAGGK TIHADNSVSVQDDGRGIPTGIHPEEGVSAA SAAEVIMTVLHAGGKFDDNSYKVSGGLHGV R G I G K F 3 0 0 0 0 0 3 5 2 3 1 1 1 0 2 1 2 0 0 3 0 0 27 0 3 5 2669.3847 P0AES6 P0AES6 77 103 gyrB DNA gyrase subunit B yes yes 4 8.2216E-12 56.95 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 92587000 15261000 13323000 0 0 28991000 35012000 0 0 1485 239 1609 8492;8493;8494;8495 6360;6361;6362 6362 3 15261000 13637000 0 0 34972000 38785000 0 0 GIPVYAPDNVNHPLWVER EKAFYGSVARLAAERGIPVYAPDNVNHPLW VYAPDNVNHPLWVERIAQLSPDVIFSFYYR R G I E R I 1 1 2 1 0 0 1 1 1 1 1 0 0 0 3 0 0 1 1 3 0 0 18 0 1 4 2075.0589 P77398 P77398 53 70 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.9272E-123 215.51 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 13885000000 3493500000 3607400000 0 0 3490400000 3293700000 0 0 1486 432 1610 8496;8497;8498;8499;8500;8501;8502;8503;8504 6363;6364;6365;6366;6367;6368;6369;6370;6371;6372;6373;6374 6368 12 3503200000 3692600000 0 0 4210500000 3648600000 0 0 GIQALFVR HLADAYERLLLETMRGIQALFVRRDEVEEA LLLETMRGIQALFVRRDEVEEAWKWVDSIT R G I V R R 1 1 0 0 0 1 0 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 8 0 0 1 902.53379 P0AC53 P0AC53 431 438 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.0018708 89.673 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15802000 2970600 4678400 0 0 4834400 3319000 0 0 1487 205 1611 8505;8506;8507;8508 6375;6376;6377 6377 3 2970600 4788800 0 0 5831800 3676700 0 0 GIQEQLK KGGVIPGEYIPAVDKGIQEQLKAGPLAGYP EYIPAVDKGIQEQLKAGPLAGYPVVDMGIR K G I L K A 0 0 0 0 0 2 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 1 0 814.45487 P0A6M8 P0A6M8 556 562 fusA Elongation factor G yes yes 2 0.0045543 87.582 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 1488 76 1612 8509;8510;8511 6378;6379;6380 6379 3 0 0 0 0 0 0 0 0 GIRPGLIK KTTLLKKLIPALCARGIRPGLIKHTHHDMD IPALCARGIRPGLIKHTHHDMDVDKPGKDS R G I I K H 0 1 0 0 0 0 0 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 8 1 0 1 852.55452 P32125 P32125 35 42 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 2 0.0044995 90.986 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 77004000 21224000 27631000 0 0 14710000 13439000 0 0 1489 337 1613 8512;8513;8514;8515 6381;6382;6383 6381 3 21224000 28284000 0 0 17745000 14887000 0 0 GISHFITEHIAPFYER GDEPIDICQVKKGEKGISHFITEHIAPFYE ISHFITEHIAPFYERRWGGFLRDFKQNRII K G I E R R 1 1 0 0 0 0 2 1 2 3 0 0 0 2 1 1 1 0 1 0 0 0 16 0 2 2 1915.9581 P0AFZ1 P0AFZ1 228 243 sseB Protein SseB yes yes 3;4 5.8228E-05 63.894 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 32329000 5813100 9693200 0 0 9782100 7040700 0 0 1490 253 1614 8516;8517;8518;8519;8520;8521;8522;8523 6384;6385;6386;6387;6388 6386 5 5813100 9922000 0 0 11800000 7799500 0 0 GISYETATFPWAASGR EVAWVGLTEKEAKEKGISYETATFPWAASG ISYETATFPWAASGRAIASDCADGMTKLIF K G I G R A 3 1 0 0 0 0 1 2 0 1 0 0 0 1 1 2 2 1 1 0 0 0 16 0 1 4 1712.8158 P0A9P0 P0A9P0 371 386 lpdA Dihydrolipoyl dehydrogenase yes yes 2 8.8323E-36 135.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41976000 10637000 10105000 0 0 9937300 11297000 0 0 1491 172 1615 8524;8525;8526;8527 6389;6390;6391;6392 6392 4 10637000 10344000 0 0 11987000 12515000 0 0 GITINTSHVEYDTPTR RAFDQIDNAPEEKARGITINTSHVEYDTPT ITINTSHVEYDTPTRHYAHVDCPGHADYVK R G I T R H 0 1 1 1 0 0 1 1 1 2 0 0 0 0 1 1 4 0 1 1 0 0 16 0 1 1 1802.8799 P0CE48;P0CE47 P0CE48 60 75 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2;3 7.8763E-69 158.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 243090000 58932000 48050000 0 0 68100000 68007000 0 0 1492 269 1616 8528;8529;8530;8531;8532;8533;8534;8535 6393;6394;6395;6396;6397;6398;6399;6400 6400 8 58932000 49184000 0 0 82149000 75337000 0 0 GIVDIPVYPLK AYVMAFGSYSTAMLKGIVDIPVYPLKGYSL AMLKGIVDIPVYPLKGYSLTIPIAQEDGAP K G I L K G 0 0 0 1 0 0 0 1 0 2 1 1 0 0 2 0 0 0 1 2 0 0 11 0 0 2 1212.7118 P0A6J5 P0A6J5 263 273 dadA D-amino acid dehydrogenase yes yes 2 0.0030647 58.676 By MS/MS By MS/MS By MS/MS 1 1 1 9063700 3224100 0 0 0 2640400 3199300 0 0 1493 74 1617 8536;8537;8538 6401;6402 6402 2 3224100 0 0 0 3185100 3544100 0 0 GIVEHVTLLEFAP IGGGNSGVEAAIDLAGIVEHVTLLEFAPEM LAGIVEHVTLLEFAPEMKADQVLQDKLRSL A G I A P E 1 0 0 0 0 0 2 1 1 1 2 0 0 1 1 0 1 0 0 2 0 0 13 0 2 1 1423.7711 P35340 P35340 376 388 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 4.1769E-17 114.89 By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 629840000 593290000 904700 0 0 16256000 19388000 0 0 1494 348 1618 8539;8540;8541;8542;8543 6403;6404 6404 2 596360000 5414600 0 0 23143000 27638000 0 0 GKDLGSMDVNEVIEK DKEVESGKVAVRTRRGKDLGSMDVNEVIEK GKDLGSMDVNEVIEKLQQEIRSRSLKQLEE R G K E K L 0 0 1 2 0 0 2 2 0 1 1 2 1 0 0 1 0 0 0 2 0 0 15 1 2 0 1632.8029 P0A8M3 P0A8M3 613 627 thrS Threonine--tRNA ligase yes yes 2;3 4.8081E-29 116.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 71128000 5264600 32128000 0 0 27052000 6683900 0 0 1495 147 1619 8544;8545;8546;8547;8548;8549;8550 6405;6406;6407;6408;6409 6405 4 5264600 32886000 0 0 32633000 7404300 0 0 GKEQHVTIPAHQVNAEFFEEGK EHEVKFVDLRFTDTKGKEQHVTIPAHQVNA IPAHQVNAEFFEEGKMFDGSSIGGWKGINE K G K G K M 2 0 1 0 0 2 4 2 2 1 0 2 0 2 1 0 1 0 0 2 0 0 22 1 4 3 2494.2241 P0A9C5 P0A9C5 27 48 glnA Glutamine synthetase yes yes 4 1.6366E-05 44.863 By matching By MS/MS 1 1 17137000 0 0 0 0 8793000 8343700 0 0 1496 164 1620 8551;8552 6410 6410 1 0 0 0 0 10607000 9243000 0 0 GKGAAGGHTATHHASAAPARPQPVE APRHSDWQRPTFAFEGKGAAGGHTATHHAS THHASAAPARPQPVE_______________ E G K V E - 7 1 0 0 0 1 1 4 3 0 0 1 0 0 3 1 2 0 0 1 0 0 25 2 0 10 2375.1843 P21513 P21513 1037 1061 rne Ribonuclease E yes yes 4 0.0017059 24.153 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 82187000 5768400 9945800 17992000 33218000 4960200 10302000 0 0 1497 297 1621 8553;8554;8555;8556;8557;8558 6411;6412;6413 6413 3 88630000 151670000 152880000 251840000 76366000 156150000 0 0 GKGFAGTVK LFADVKKVDVTGTSKGKGFAGTVKRWNFRT VTGTSKGKGFAGTVKRWNFRTQDATHGNSL K G K V K R 1 0 0 0 0 0 0 3 0 0 0 2 0 1 0 0 1 0 0 1 0 0 9 1 0 1 863.4865 P60438 P60438 115 123 rplC 50S ribosomal protein L3 yes yes 2 0.016354 53.775 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 31037000 11241000 12591000 0 0 3194500 4010900 0 0 1498 380 1622 8559;8560;8561;8562 6414 6414 1 11241000 12888000 0 0 3853500 4443200 0 0 GKGNVEYWVALIQPGK DKPITEKPLAVRMGKGKGNVEYWVALIQPG KGNVEYWVALIQPGKVLYEMDGVPEELARE K G K G K V 1 0 1 0 0 1 1 3 0 1 1 2 0 0 1 0 0 1 1 2 0 0 16 1 1 2 1757.9465 P0ADY7 P0ADY7 85 100 rplP 50S ribosomal protein L16 yes yes 3 6.5979E-11 85.734 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45872000 12552000 11051000 0 0 10013000 12257000 0 0 1499 229 1623 8563;8564;8565;8566 6415;6416;6417;6418 6418 4 12552000 11312000 0 0 12078000 13578000 0 0 GKHPAVPVDVVHRALRE LLPEALVAGIADALEGKHPAVPVDVVHRAL HPAVPVDVVHRALREIHERADAVRRQRFQA E G K R E I 2 2 0 1 0 0 1 1 2 0 1 1 0 0 2 0 0 0 0 4 0 0 17 3 0 4 1879.054 P0A9L3 P0A9L3 48 64 fklB FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase yes yes 4;5 0.00012405 50.077 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 1 2 2 64325000 0 5717900 9861100 12298000 3937600 2419800 13220000 16872000 1500 170 1624 8567;8568;8569;8570;8571;8572;8573;8574;8575;8576;8577;8578;8579 6419;6420;6421;6422;6423 6420 4 0 87199000 83788000 93234000 60623000 36676000 101740000 96825000 GKIDRPE QVIFNPNLFPYENMEGKIDRPEEYADIATK LFPYENMEGKIDRPEEYADIATKCVTNFRE E G K P E E 0 1 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 7 2 0 1 813.43447 P0A8E1 P0A8E1 100 106 ycfP UPF0227 protein YcfP yes yes 2 0.007545 58.917 By MS/MS 1 0 0 0 0 0 0 0 0 0 1501 143 1625 8580 6424 6424 1 0 0 0 0 0 0 0 0 GKIDRPEE QVIFNPNLFPYENMEGKIDRPEEYADIATK FPYENMEGKIDRPEEYADIATKCVTNFREK E G K E E Y 0 1 0 1 0 0 2 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 8 2 1 1 942.47706 P0A8E1 P0A8E1 100 107 ycfP UPF0227 protein YcfP yes yes 2 0.012695 100.02 By MS/MS 1 120670000 0 0 0 0 0 0 0 120670000 1502 143 1626 8581 6425 6425 1 0 0 0 0 0 0 0 692520000 GKIHRLE PGMIERYTAAITGAEGKIHRLEDWGRRQLA TAAITGAEGKIHRLEDWGRRQLAYPINKLH E G K L E D 0 1 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 7 2 0 0 851.49774 P02358 P02358 34 40 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 2 0.014097 64.757 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76524000 0 0 11766000 11344000 0 0 19740000 33675000 1503 35 1627 8582;8583;8584;8585 6426;6427 6427 2 0 0 99975000 86003000 0 0 151920000 193250000 GKIIGIDLGTTNSCVAIMDGTTPRVLE ______________________________ SCVAIMDGTTPRVLENAEGDRTTPSIIAYT M G K L E N 1 1 1 2 1 0 1 4 0 4 2 1 1 0 1 1 4 0 0 2 0 0 27 2 0 2 2830.4569 P0A6Y8 P0A6Y8 2 28 dnaK Chaperone protein DnaK yes yes 3 6.1462E-54 121.86 By MS/MS By MS/MS 2 2 111660000 0 0 0 0 53893000 57768000 0 0 1504 86 1628;1629 8586;8587;8588;8589 6428;6429;6430;6431;6432 6431 92 5 0 0 0 0 829740000 875560000 0 0 GKPFAPLLEK GRRHVVKVVNPELHKGKPFAPLLEKNSKSG PELHKGKPFAPLLEKNSKSGGRNNNGRITT K G K E K N 1 0 0 0 0 0 1 1 0 0 2 2 0 1 2 0 0 0 0 0 0 0 10 1 1 3 1098.6437 P60422 P60422 27 36 rplB 50S ribosomal protein L2 yes yes 2;3 4.0704E-20 137.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 6263300000 1700200000 1844500000 0 0 1146700000 1571900000 0 0 1505 379 1630 8590;8591;8592;8593;8594;8595;8596;8597 6433;6434;6435;6436;6437;6438;6439;6440 6439 8 1700200000 1888100000 0 0 1383300000 1741300000 0 0 GKVVPKVALRPLADINTIFTE GTRQDLTEAFQFAAEGKVVPKVALRPLADI VALRPLADINTIFTEMEEGKIRGRMVIDFR E G K T E M 2 1 1 1 0 0 1 1 0 2 2 2 0 1 2 0 2 0 0 3 0 0 21 3 0 4 2280.3206 P39451 P39451 300 320 adhP Alcohol dehydrogenase, propanol-preferring yes yes 3;4 0.00045512 43.12 By MS/MS By MS/MS 2 1 11798000 0 0 0 0 6982500 4815400 0 0 1506 364 1631 8598;8599;8600 6441;6442;6443;6444 6441 4 0 0 0 0 107500000 72985000 0 0 GKWVGICGELGGESR FLRMLQQIVTTAHQRGKWVGICGELGGESR GKWVGICGELGGESRYLPLLLGLGLDELSM R G K S R Y 0 1 0 0 1 0 2 5 0 1 1 1 0 0 0 1 0 1 0 1 0 0 15 1 2 0 1603.7777 P77439 P77439 605 619 fryA Multiphosphoryl transfer protein 1;Phosphoenolpyruvate-protein phosphotransferase;Phosphocarrier protein HPr;Fructose-like phosphotransferase enzyme IIA component 2 yes yes 4 0.0019952 37.594 By MS/MS By MS/MS 1 1 4952400 2981200 1971200 0 0 0 0 0 0 1507 434 1632 8601;8602 6445 6445 1 2981200 2017700 0 0 0 0 0 0 GLAALSLPEHQR LPASAAHSHQHVVKKGLAALSLPEHQRWRR VKKGLAALSLPEHQRWRRSLNSGQGYQACG K G L Q R W 2 1 0 0 0 1 1 1 1 0 3 0 0 0 1 1 0 0 0 0 0 0 12 0 1 3 1290.7044 P33030 P33030 216 227 yeiR Uncharacterized protein YeiR yes yes 2;3 1.4106E-110 218.55 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 140140000 20405000 44879000 0 0 32897000 41963000 0 0 1508 343 1633 8603;8604;8605;8606;8607;8608;8609;8610 6446;6447;6448;6449;6450 6447 5 20405000 45938000 0 0 39684000 46485000 0 0 GLAHRGYTE AAGKPFDTSLLETLEGLAHRGYTEGFLRRH LLETLEGLAHRGYTEGFLRRHTHDDYQNYE E G L T E G 1 1 0 0 0 0 1 2 1 0 1 0 0 0 0 0 1 0 1 0 0 0 9 1 0 1 1002.4883 P76403 P76403 328 336 yegQ Uncharacterized protease YegQ yes yes 2 7.4557E-05 110.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 59605000 7463300 1436500 9712300 10233000 0 4327500 12322000 14110000 1509 424 1634 8611;8612;8613;8614;8615;8616;8617 6451;6452;6453;6454;6455;6456 6456 5 114670000 21907000 82524000 77584000 0 65589000 94836000 80975000 GLALLDEELAK VLKTEEEQFARTLERGLALLDEELAKLSGD TLERGLALLDEELAKLSGDTLDGETAFRLY R G L A K L 2 0 0 1 0 0 2 1 0 0 4 1 0 0 0 0 0 0 0 0 0 0 11 0 2 2 1170.6496 P00957 P00957 374 384 alaS Alanine--tRNA ligase yes yes 2 4.7068E-05 96.331 By matching By matching By MS/MS By MS/MS 1 1 1 1 27989000 4881200 7878400 0 0 6728600 8500500 0 0 1510 33 1635 8618;8619;8620;8621 6457;6458 6458 2 4881200 8064400 0 0 8116700 9416700 0 0 GLAQGTDVSFGSFGLK PKRTKFRKMHKGRNRGLAQGTDVSFGSFGL LAQGTDVSFGSFGLKAVGRGRLTARQIEAA R G L L K A 1 0 0 1 0 1 0 4 0 0 2 1 0 2 0 2 1 0 0 1 0 0 16 0 0 1 1582.7991 P0ADY7 P0ADY7 19 34 rplP 50S ribosomal protein L16 yes yes 2 1.0289E-56 161.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 230760000 59843000 45478000 0 0 54622000 70816000 0 0 1511 229 1636 8622;8623;8624;8625 6459;6460;6461;6462 6462 4 59843000 46552000 0 0 65891000 78448000 0 0 GLATTIK LELFKPFIYGKLELRGLATTIKAAKKMVER IYGKLELRGLATTIKAAKKMVEREEAVVWD R G L I K A 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 2 0 0 0 0 0 7 0 0 1 702.42759 P0A8T7 P0A8T7 389 395 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.00068119 79.454 By MS/MS 1 4896000 4896000 0 0 0 0 0 0 0 1512 153 1637 8626 6463 6463 0 4896000 0 0 0 0 0 0 0 GLDASIEHDIVHGLQALPSR LTVLLMLVAKLSRLKGLDASIEHDIVHGLQ IEHDIVHGLQALPSRIEQMLSQDKRIEALA K G L S R I 2 1 0 2 0 1 1 2 2 2 3 0 0 0 1 2 0 0 0 1 0 0 20 0 1 3 2127.1073 P17169 P17169 425 444 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3;4 1.0175E-235 273.38 By MS/MS By MS/MS By MS/MS By MS/MS 5 4 5 3 8595100000 1838100000 1416400000 0 0 2883400000 2457200000 0 0 1513 288 1638 8627;8628;8629;8630;8631;8632;8633;8634;8635;8636;8637;8638;8639;8640;8641;8642;8643 6464;6465;6466;6467;6468;6469;6470;6471;6472;6473;6474;6475;6476;6477 6475 14 1867400000 1464900000 0 0 3578600000 2722100000 0 0 GLDIEELPHVVNYELPNVPEDYVHR SGDIRVLVATDIAARGLDIEELPHVVNYEL VNYELPNVPEDYVHRIGRTGRAAATGEALS R G L H R I 0 1 2 2 0 0 4 1 2 1 3 0 0 0 3 0 0 0 2 4 0 0 25 0 4 3 2945.4559 P25888 P25888 308 332 rhlE ATP-dependent RNA helicase RhlE yes yes 3;4 7.1486E-185 210.88 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 838840000 162790000 165860000 0 0 260920000 249270000 0 0 1514 318 1639 8644;8645;8646;8647;8648;8649;8650;8651 6478;6479;6480;6481;6482;6483;6484;6485;6486 6484 9 162790000 169780000 0 0 314740000 276130000 0 0 GLDITITTTAK IIFPEIDYDKVDRVRGLDITITTTAKSDEE DRVRGLDITITTTAKSDEEGRALLAAFDFP R G L A K S 1 0 0 1 0 0 0 1 0 2 1 1 0 0 0 0 4 0 0 0 0 0 11 0 0 1 1132.634 P62399 P62399 151 161 rplE 50S ribosomal protein L5 yes yes 2 1.5713E-07 70.399 By MS/MS 1 0 0 0 0 0 0 0 0 0 1515 388 1640 8652 6487 6487 1 0 0 0 0 0 0 0 0 GLDSLNE EKYRGQGLARQLVYEGLDSLNEFGYAAVVT LARQLVYEGLDSLNEFGYAAVVTLGDPALY E G L N E F 0 0 1 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 0 0 746.34465 P63417 P63417 96 102 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 1 0.0017855 100.19 By matching By MS/MS By matching By matching 1 1 1 1 40758000 0 0 11519000 8358400 0 0 7474600 13406000 1516 394 1641 8653;8654;8655;8656 6488 6488 1 0 0 97875000 63370000 0 0 57527000 76937000 GLEGINSPVAK GAKGLAYIKVNERAKGLEGINSPVAKFLNA ERAKGLEGINSPVAKFLNAEIIEDILDRTA K G L A K F 1 0 1 0 0 0 1 2 0 1 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1 2 1083.5924 P21889 P21889 360 370 aspS Aspartate--tRNA ligase yes yes 2 0.00029891 73.985 By MS/MS By matching By MS/MS 1 1 1 6961900 0 2009300 0 0 1956500 2996100 0 0 1517 298 1642 8657;8658;8659 6489;6490 6489 2 0 2056700 0 0 2360200 3319000 0 0 GLELDYNPNTEIIPGIK LGYVLNKGVLQLSRRGLELDYNPNTEIIPG ELDYNPNTEIIPGIKGRIEFAKTIRGFHLN R G L I K G 0 0 2 1 0 0 2 2 0 3 2 1 0 0 2 0 1 0 1 0 0 0 17 0 2 2 1884.9833 P15006 P15006 57 73 mcrC Protein McrC yes yes 2 0.0034733 42.556 By matching By matching By matching By MS/MS 1 1 1 1 15569000 2743200 4581800 0 0 4185200 4058400 0 0 1518 280 1643 8660;8661;8662;8663 6491 6491 1 2743200 4690000 0 0 5048700 4495800 0 0 GLETPLRPPVHEMDNETR LSKEAALVHEALVARGLETPLRPPVHEMDN TPLRPPVHEMDNETRKSLIAGHMTEIMQLL R G L T R K 0 2 1 1 0 0 3 1 1 0 2 0 1 0 3 0 2 0 0 1 0 0 18 1 3 3 2090.0215 P0A6T5 P0A6T5 19 36 folE GTP cyclohydrolase 1 yes yes 3;4 1.2057E-26 108.56 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 195730000 50661000 40798000 0 0 41344000 61192000 0 1737900 1519 81 1644 8664;8665;8666;8667;8668;8669;8670;8671;8672 6492;6493;6494;6495;6496;6497;6498;6499;6500 6498 9 50661000 41760000 0 0 49874000 67787000 0 9973600 GLEVKRIINEP NDAQRQATKDAGRIAGLEVKRIINEPTAAA GRIAGLEVKRIINEPTAAALAYGLDKGTGN A G L E P T 0 1 1 0 0 0 2 1 0 2 1 1 0 0 1 0 0 0 0 1 0 0 11 2 2 0 1266.7296 P0A6Y8 P0A6Y8 162 172 dnaK Chaperone protein DnaK yes yes 2;3 6.191E-08 102.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 66869000 7330500 7797200 0 0 25759000 25982000 0 0 1520 86 1645 8673;8674;8675;8676;8677;8678;8679;8680 6501;6502;6503;6504;6505 6504 3 44251000 46666000 0 0 36673000 37038000 0 0 GLGAASLALR DVTMVRNFAVRSRRKGLGAASLALRLSALR RSRRKGLGAASLALRLSALRSFFDWLVSQN K G L L R L 3 1 0 0 0 0 0 2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 0 3 927.55016 P0A8P6 P0A8P6 67 76 xerC Tyrosine recombinase XerC yes yes 2 9.1203E-15 130.22 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 146690000 37270000 33080000 0 0 40775000 35560000 0 0 1521 150 1646 8681;8682;8683;8684 6506;6507;6508 6507 3 37270000 33861000 0 0 49187000 39393000 0 0 GLGAGANPEVGR TAVGQTIQIGSGITKGLGAGANPEVGRNAA ITKGLGAGANPEVGRNAADEDRDALRAALE K G L G R N 2 1 1 0 0 0 1 4 0 0 1 0 0 0 1 0 0 0 0 1 0 0 12 0 1 3 1096.5625 P0A9A6 P0A9A6 67 78 ftsZ Cell division protein FtsZ yes yes 2 9.1347E-18 102.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 29350000 0 659780 0 0 15506000 13184000 0 0 1522 161 1647 8685;8686;8687;8688;8689;8690 6509;6510;6511;6512 6509 4 0 3948800 0 0 19384000 14605000 0 0 GLHAYTHATLVSPVHLK AQLSEEQVTKLLHRKGLHAYTHATLVSPVH HAYTHATLVSPVHLKEDLAQTRKRGYSFDD K G L L K E 2 0 0 0 0 0 0 1 3 0 3 1 0 0 1 1 2 0 1 2 0 0 17 0 0 3 1843.0105 P16528 P16528 182 198 iclR Acetate operon repressor yes yes 3;4 5.2066E-84 179.17 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 2 1 1 2 2 1 164650000 33972000 34974000 894300 1882100 40049000 49759000 0 3117400 1523 285 1648 8691;8692;8693;8694;8695;8696;8697;8698;8699;8700;8701 6513;6514;6515;6516;6517;6518;6519;6520 6519 8 33972000 35800000 7598700 14270000 48312000 55122000 0 17890000 GLHEAGWMVEMPK DIAEQYKRRRDVLVKGLHEAGWMVEMPKAS VKGLHEAGWMVEMPKASMYVWAKIPEPYAA K G L P K A 1 0 0 0 0 0 2 2 1 0 1 1 2 0 1 0 0 1 0 1 0 0 13 0 2 2 1483.6952 P77434 P77434 313 325 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 3 6.7717E-06 74.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 90861000 26575000 26193000 0 0 14730000 23363000 0 0 1524 433 1649 8702;8703;8704;8705 6521;6522;6523;6524 6524 4 26575000 26811000 0 0 17769000 25881000 0 0 GLHLQESIA GGNSLLDLVVFGRAAGLHLQESIAEQGALR VFGRAAGLHLQESIAEQGALRDASESDVEA A G L I A E 1 0 0 0 0 1 1 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1 0 966.51345 P0AC41 P0AC41 416 424 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.014376 59.205 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19446000 1915900 1445100 0 0 11519000 4565500 0 0 1525 203 1650 8706;8707;8708;8709 6525;6526 6526 1 11565000 8649100 0 0 16400000 6508100 0 0 GLHSAFTVR RLQAFEGVVIAIRNRGLHSAFTVRKISNGE IAIRNRGLHSAFTVRKISNGEGVERVFQTH R G L V R K 1 1 0 0 0 0 0 1 1 0 1 0 0 1 0 1 1 0 0 1 0 0 9 0 0 1 986.52976 P0A7K6 P0A7K6 54 62 rplS 50S ribosomal protein L19 yes yes 2 0.011908 73.26 By matching By MS/MS By MS/MS 1 2 1 29237000 6966800 8619600 0 0 13651000 0 0 0 1526 109 1651 8710;8711;8712;8713 6527;6528 6527 0 6966800 12070000 0 0 16467000 0 0 0 GLIDSSDLPLNVSR DDAEQFMPNYLRFVRGLIDSSDLPLNVSRE RGLIDSSDLPLNVSREILQDSTVTRNLRNA R G L S R E 0 1 1 2 0 0 0 1 0 1 3 0 0 0 1 3 0 0 0 1 0 0 14 0 0 1 1484.7835 P0A6Z3 P0A6Z3 323 336 htpG Chaperone protein HtpG yes yes 2 1.2259E-125 202.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 157910000 34599000 45064000 0 0 31918000 46331000 0 0 1527 88 1652 8714;8715;8716;8717 6529;6530;6531;6532 6531 4 34599000 46127000 0 0 38503000 51325000 0 0 GLIVAPPK ARVLDLASPIGRGQRGLIVAPPKAGKTMLL PIGRGQRGLIVAPPKAGKTMLLQNIAQSIA R G L P K A 1 0 0 0 0 0 0 1 0 1 1 1 0 0 2 0 0 0 0 1 0 0 8 0 0 3 793.50617 P0AG30 P0AG30 174 181 rho Transcription termination factor Rho yes yes 2 0.0027891 75.311 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18357000 3540700 3815200 0 0 4077600 6923200 0 0 1528 256 1653 8718;8719;8720;8721 6533;6534;6535;6536 6536 4 3540700 3905200 0 0 4918800 7669400 0 0 GLKAVAAGMNPMDLKRGIDKAVTAAVEE GTTTATVLAQAIITEGLKAVAAGMNPMDLK LKRGIDKAVTAAVEELKALSVPCSDSKAIA E G L E E L 6 1 1 2 0 0 2 3 0 1 2 3 2 0 1 0 1 0 0 3 0 0 28 4 1 7 2854.5045 P0A6F5 P0A6F5 103 130 groL 60 kDa chaperonin yes yes 3;4;5 6.1311E-31 101.3 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 7 7 1445500000 5878500 6909500 0 0 720720000 711970000 0 0 1529 68 1654;1655 8722;8723;8724;8725;8726;8727;8728;8729;8730;8731;8732;8733;8734;8735;8736;8737;8738;8739 6537;6538;6539;6540;6541;6542;6543;6544;6545;6546;6547;6548;6549;6550;6551;6552;6553;6554;6555;6556 6543 76;77 20 90321000 105370000 0 0 11096000000 10791000000 0 0 GLKENVIVGR VLTEAAVAGKRDELRGLKENVIVGRLIPAG RDELRGLKENVIVGRLIPAGTGYAYHQDRM R G L G R L 0 1 1 0 0 0 1 2 0 1 1 1 0 0 0 0 0 0 0 2 0 0 10 1 1 0 1083.64 P0A8T7 P0A8T7 1346 1355 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 0.013836 33.229 By MS/MS By MS/MS By MS/MS 1 1 1 8845100 3906100 0 0 0 2438500 2500500 0 0 1530 153 1656 8740;8741;8742 6557;6558 6557 2 3906100 0 0 0 2941600 2770000 0 0 GLKVTLP ______________________________ NNTALKKAGLKVTLPRLKILEVLQEPDNHH A G L L P R 0 0 0 0 0 0 0 1 0 0 2 1 0 0 1 0 1 0 0 1 0 0 7 1 0 0 726.46398 P0A9A9 P0A9A9 12 18 fur Ferric uptake regulation protein yes yes 2 0.013883 66.994 By MS/MS By MS/MS By MS/MS 1 1 1 98729000 26953000 26719000 0 0 0 45057000 0 0 1531 162 1657 8743;8744;8745 6559 6559 1 162700000 159910000 0 0 0 64229000 0 0 GLLDCPHYTRPE VLGHEASATEDSFAEGLLDCPHYTRPEVLE FAEGLLDCPHYTRPEVLEGMEVPPVLLSGN E G L P E V 0 1 0 1 1 0 1 1 1 0 2 0 0 0 2 0 1 0 1 0 0 0 12 1 0 2 1456.6769 P0A873 P0A873 174 185 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 3 6.1365E-07 76.522 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 1 126300000 17882000 17196000 22143000 19684000 5886100 0 18213000 25298000 1532 140 1658 8746;8747;8748;8749;8750;8751;8752;8753;8754;8755 6560;6561;6562;6563;6564;6565;6566;6567;6568 6562 9 265220000 255130000 188150000 149230000 90623000 0 140170000 145180000 GLLDCPHYTRPEVLE VLGHEASATEDSFAEGLLDCPHYTRPEVLE GLLDCPHYTRPEVLEGMEVPPVLLSGNHAE E G L L E G 0 1 0 1 1 0 2 1 1 0 3 0 0 0 2 0 1 0 1 1 0 0 15 1 1 2 1797.872 P0A873 P0A873 174 188 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 3 8.6272E-05 61.732 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 115330000 10847000 9049500 12751000 20795000 15377000 12759000 12502000 21246000 1533 140 1659 8756;8757;8758;8759;8760;8761;8762;8763 6569;6570;6571;6572;6573;6574 6570 6 166660000 138010000 108340000 157660000 236750000 193380000 96221000 121930000 GLLEEDAFIER GGEYRRICTLGEKLRGLLEEDAFIERGERR EKLRGLLEEDAFIERGERRQPVASFEQALD R G L E R G 1 1 0 1 0 0 3 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 11 0 3 1 1290.6456 P0AES6 P0AES6 699 709 gyrB DNA gyrase subunit B yes yes 2 0.00012024 87.149 By matching By MS/MS By MS/MS 1 1 2 46881000 772690 0 0 0 418340 45690000 0 0 1534 239 1660 8764;8765;8766;8767 6575 6575 1 11872000 0 0 0 595590 50898000 0 0 GLLQQRHRE YAREITEPQFAYGMEGLLQQRHREGRLSGV FAYGMEGLLQQRHREGRLSGVLNGVDEKIW E G L R E G 0 2 0 0 0 2 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 1135.621 P0A6U8 P0A6U8 230 238 glgA Glycogen synthase yes yes 3 0.019482 39.305 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 74605000 5164200 5734600 11895000 12007000 2763900 3860800 10703000 22475000 1535 83 1661 8768;8769;8770;8771;8772;8773;8774;8775 6576 6576 1 79346000 87454000 101070000 91035000 42553000 58516000 82376000 128980000 GLMAGLK ______________________________ ______________________________ K G L L K A 1 0 0 0 0 0 0 2 0 0 2 1 1 0 0 0 0 0 0 0 0 0 7 0 0 1 688.39418 P64574 P64574 8 14 yghW Uncharacterized protein YghW yes yes 2 0.0019805 71.359 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 20299000 5411200 6300500 0 0 4253700 4334000 0 0 1536 396 1662 8776;8777;8778;8779 6577;6578;6579 6578 314 3 5411200 6449200 0 0 5131200 4801100 0 0 GLMAKPDGSIIETPITANFR ARGSAAQIRQLAGMRGLMAKPDGSIIETPI PDGSIIETPITANFREGLNVLQYFISTHGA R G L F R E 2 1 1 1 0 0 1 2 0 3 1 1 1 1 2 1 2 0 0 0 0 0 20 1 1 4 2130.1143 P0A8T7 P0A8T7 745 764 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 3.9898E-25 99.021 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40524000 12812000 7292200 0 0 10850000 9570000 0 0 1537 153 1663 8780;8781;8782;8783 6580;6581;6582;6583 6581 4 12812000 7464300 0 0 13088000 10601000 0 0 GLMPNPK AMRVVGQLGQVLGPRGLMPNPKVGTVTPNV LGQVLGPRGLMPNPKVGTVTPNVAEAVKNA R G L P K V 0 0 1 0 0 0 0 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 7 0 0 2 755.4 P0A7L0 P0A7L0 135 141 rplA 50S ribosomal protein L1 yes yes 2 0.0026018 83.229 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36441000 9392300 8207000 0 0 10643000 8198800 0 0 1538 110 1664 8784;8785;8786;8787 6584;6585;6586;6587 6587 4 9392300 8400700 0 0 12839000 9082400 0 0 GLNPNAILVPQQGVTRTPRGDATVLVVGADDKVE HTLLPGMFVRARLEEGLNPNAILVPQQGVT GDATVLVVGADDKVETRPIVASQAIGDKWL E G L V E T 3 2 2 3 0 2 1 4 0 1 3 1 0 0 3 0 3 0 0 6 0 0 34 3 0 6 3498.8794 P0AE06 P0AE06 300 333 acrA Multidrug efflux pump subunit AcrA yes yes 4 0.00074915 22.579 By MS/MS By MS/MS 1 1 11719000 0 0 0 0 5373500 6345900 0 0 1539 232 1665 8788;8789 6588 6588 1 0 0 0 0 82730000 96182000 0 0 GLPIPVVITVYADR EFCKAFNAKTDSIEKGLPIPVVITVYADRS KGLPIPVVITVYADRSFTFVTKTPPAAVLL K G L D R S 1 1 0 1 0 0 0 1 0 2 1 0 0 0 2 0 1 0 1 3 0 0 14 0 0 3 1511.8712 P0A7J7 P0A7J7 52 65 rplK 50S ribosomal protein L11 yes yes 2 0.012367 40.589 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 71193000 13519000 6669300 0 0 31165000 19840000 0 0 1540 107 1666 8790;8791;8792;8793 6589 6589 1 13519000 6826700 0 0 37594000 21978000 0 0 GLPYSIVNQALGK DTTVGRAILWMIVPKGLPYSIVNQALGKKA PKGLPYSIVNQALGKKAISKMLNTCYRILG K G L G K K 1 0 1 0 0 1 0 2 0 1 2 1 0 0 1 1 0 0 1 1 0 0 13 0 0 2 1358.7558 P0A8T7 P0A8T7 586 598 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.00080695 64.297 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19714000 3588400 6438200 0 0 3149800 6537400 0 0 1541 153 1667 8794;8795;8796;8797 6590;6591 6590 2 3588400 6590100 0 0 3799600 7242000 0 0 GLTLATAQSDDLQALLAER YRRDLSMMVEWLHHRGLTLATAQSDDLQAL ATAQSDDLQALLAERLEGGYKATSSARLLS R G L E R L 4 1 0 2 0 2 1 1 0 0 5 0 0 0 0 1 2 0 0 0 0 0 19 0 1 4 1985.0429 P0A8P8 P0A8P8 44 62 xerD Tyrosine recombinase XerD yes yes 2 1.7872E-143 204.13 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 153790000 28641000 22836000 0 0 41163000 61153000 0 0 1542 151 1668 8798;8799;8800;8801 6592;6593;6594;6595 6594 4 28641000 23375000 0 0 49655000 67744000 0 0 GLTNEALNVTLVEAGER ELHNAVKQLHSYGYKGLTNEALNVTLVEAG TNEALNVTLVEAGERILPALPPRISAAAHN K G L E R I 2 1 2 0 0 0 3 2 0 0 3 0 0 0 0 0 2 0 0 2 0 0 17 0 3 2 1784.9268 P00393 P00393 203 219 ndh NADH dehydrogenase yes yes 2 2.796E-17 100.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23203000 6332200 3620400 0 0 7712700 5537700 0 0 1543 25 1669 8802;8803;8804;8805 6596;6597;6598;6599 6599 4 6332200 3705900 0 0 9303800 6134500 0 0 GLVHVSE LTDYGCFVEIEEGVEGLVHVSEMDWTNKNI VEIEEGVEGLVHVSEMDWTNKNIHPSKVVN E G L S E M 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 0 0 739.38645 P0AG67 P0AG67 302 308 rpsA 30S ribosomal protein S1 yes yes 2 0.016973 72.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 39714000 2959200 3603400 6818700 5813800 0 0 9664700 10854000 1544 261 1670 8806;8807;8808;8809;8810;8811 6600 6600 1 45467000 54953000 57938000 44078000 0 0 74382000 62287000 GLVKANDIDVPAALIDSE LKSAIRNRVKSQAIEGLVKANDIDVPAALI KANDIDVPAALIDSEIDVLRRQAAQRFGGN E G L S E I 3 0 1 3 0 0 1 1 0 2 2 1 0 0 1 1 0 0 0 2 0 0 18 1 0 4 1838.9626 P0A850 P0A850 293 310 tig Trigger factor yes yes 2 3.1861E-17 84.892 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 11941000 613550 856940 998650 2115500 0 0 2687700 4668800 1545 137 1671 8812;8813;8814;8815;8816;8817 6601;6602;6603;6604 6602 4 9427100 13068000 8485400 16039000 0 0 20685000 26793000 GLVQPTR ______________________________ ILGYWKIKGLVQPTRLLLEYLEEKYEEHLY K G L T R L 0 1 0 0 0 1 0 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 7 0 0 1 769.44464 GST-Nek6 GST-Nek6 12 18 yes yes 2 6.9625E-07 119.22 By MS/MS By MS/MS 1 1 1099500000 0 0 0 0 557010000 542480000 0 0 1546 23 1672 8818;8819 6605;6606;6607;6608;6609 6606 5 0 0 0 0 671920000 600950000 0 0 GLVRINRQGDDLHIE LAPVERVKGVLRIPEGLVRINRQGDDLHIE GLVRINRQGDDLHIETQNVAPPDSRIELIS E G L I E T 0 2 1 2 0 1 1 2 1 2 2 0 0 0 0 0 0 0 0 1 0 0 15 2 0 0 1733.9173 P33030 P33030 277 291 yeiR Uncharacterized protein YeiR yes yes 3 0.00087708 46.964 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 151710000 13999000 18604000 29638000 25860000 15045000 0 15050000 33516000 1547 343 1673 8820;8821;8822;8823;8824;8825;8826;8827 6610;6611;6612 6612 3 215090000 283720000 251830000 196060000 231630000 0 115830000 192340000 GLVTPVLR YHNYFDVSMAVSTPRGLVTPVLRDVDTLGM MAVSTPRGLVTPVLRDVDTLGMADIEKKIK R G L L R D 0 1 0 0 0 0 0 1 0 0 2 0 0 0 1 0 1 0 0 2 0 0 8 0 0 1 853.53854 P0AFG6 P0AFG6 278 285 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 2 0.00030029 105.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36798000 8513100 7702400 0 0 10922000 9660500 0 0 1548 247 1674 8828;8829;8830;8831 6613;6614;6615;6616 6615 4 8513100 7884200 0 0 13175000 10702000 0 0 GMAPIAEFADL LNVSPRRLLNFLESRGMAPIAEFADL____ LESRGMAPIAEFADL_______________ R G M D L - 3 0 0 1 0 0 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 11 0 1 4 1133.5427 P75914 P75914 235 245 ycdX Probable phosphatase YcdX yes yes 1 3.5927E-08 111.82 By MS/MS By MS/MS 1 1 28676000 20002000 0 0 0 8673100 0 0 0 1549 412 1675 8832;8833 6617;6618 6618 2 20002000 0 0 0 10462000 0 0 0 GMASGAVIESFLDK ILLQAEVLELKAVRKGMASGAVIESFLDKG KGMASGAVIESFLDKGRGPVATVLVREGTL K G M D K G 2 0 0 1 0 0 1 2 0 1 1 1 1 1 0 2 0 0 0 1 0 0 14 0 1 2 1423.7017 P0A705;P0A705-3;P0A705-2 P0A705 563 576 infB Translation initiation factor IF-2 yes no 2 1.0999E-12 79.659 By MS/MS By MS/MS By MS/MS 1 1 2 18743000 8302600 8044300 0 0 2396000 0 0 0 1550 90 1676;1677 8834;8835;8836;8837 6619;6620;6621;6622 6621 4 8302600 8234100 0 0 2890300 0 0 0 GMDKGGVNDLESVVK DGMVNIIGVGSCPSRGMDKGGVNDLESVVK GMDKGGVNDLESVVKCVQRAIDQAELMADC R G M V K C 0 0 1 2 0 0 1 3 0 0 1 2 1 0 0 1 0 0 0 3 0 0 15 1 1 0 1546.7661 P0ABH0 P0ABH0 45 59 ftsA Cell division protein FtsA yes yes 2;3 5.5821E-12 94.122 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 1 216390000 42251000 35837000 60538000 45351000 17007000 15407000 0 0 1551 199 1678 8838;8839;8840;8841;8842;8843;8844;8845;8846 6623;6624;6625;6626 6625 4 42251000 36683000 514380000 343830000 20516000 17067000 0 0 GMDSLAP HQHQSPLHDSSEAKPGMDSLAPEDGSHRPA HDSSEAKPGMDSLAPEDGSHRPAAEPTPPG P G M A P E 1 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 0 0 0 7 0 0 1 689.30543 P21179 P21179 25 31 katE Catalase HPII yes yes 1 0.012449 58.551 By matching By MS/MS 1 1 10799000 0 0 0 0 5774200 5024600 0 0 1552 293 1679 8847;8848 6627 6627 0 0 0 0 0 8220700 7162600 0 0 GMEVPPVLLSGNHAE GLLDCPHYTRPEVLEGMEVPPVLLSGNHAE GMEVPPVLLSGNHAEIRRWRLKQSLGRTWL E G M A E I 1 0 1 0 0 0 2 2 1 0 2 0 1 0 2 1 0 0 0 2 0 0 15 0 1 3 1548.7606 P0A873 P0A873 189 203 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 7.5208E-05 69.979 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 3 1 1 414450000 34793000 30937000 164630000 68520000 31007000 32023000 22345000 30194000 1553 140 1680;1681 8849;8850;8851;8852;8853;8854;8855;8856;8857;8858;8859;8860;8861 6628;6629;6630;6631;6632;6633;6634;6635;6636 6629 132 9 534590000 471800000 1398800000 519480000 477380000 477830000 171970000 173280000 GMPGEVLQHFTR NIKLFASHSTIELPKGMPGEVLQHFTRTRI LPKGMPGEVLQHFTRTRILNKPMNMQLLGD K G M T R T 0 1 0 0 0 1 1 2 1 0 1 0 1 1 1 0 1 0 0 1 0 0 12 0 1 1 1370.6765 P0A9P6 P0A9P6 536 547 deaD ATP-dependent RNA helicase DeaD yes yes 3 0.0038769 43.991 By MS/MS By matching By matching By matching 1 1 1 1 14789000 3469000 3909900 0 0 3542300 3867400 0 0 1554 173 1682 8862;8863;8864;8865 6637 6637 1 3469000 4002200 0 0 4273000 4284300 0 0 GMPIATPVFDGAK FSDEEVMRLAENLRKGMPIATPVFDGAKEA RKGMPIATPVFDGAKEAEIKELLKLGDLPT K G M A K E 2 0 0 1 0 0 0 2 0 1 0 1 1 1 2 0 1 0 0 1 0 0 13 0 0 4 1302.6642 P0A8V2 P0A8V2 1179 1191 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0022171 46.352 By MS/MS By MS/MS 1 1 4868400 0 0 0 0 4868400 0 0 0 1555 154 1683 8866;8867 6638;6639 6639 2 0 0 0 0 5872800 0 0 0 GMQFDRGYLSPYFINKPE VEDGTGLQDELDVVEGMQFDRGYLSPYFIN FDRGYLSPYFINKPETGAVELESPFILLAD E G M P E T 0 1 1 1 0 1 1 2 0 1 1 1 1 2 2 1 0 0 2 0 0 0 18 2 0 2 2161.0303 P0A6F5 P0A6F5 192 209 groL 60 kDa chaperonin yes yes 2;3 4.8525E-07 66.285 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1 1 2 3 689300000 32986000 43831000 27624000 31011000 114110000 124620000 15760000 299360000 1556 68 1684;1685 8868;8869;8870;8871;8872;8873;8874;8875;8876;8877;8878;8879;8880;8881;8882;8883 6640;6641;6642;6643;6644;6645;6646;6647;6648;6649;6650;6651 6651 83 12 506820000 668420000 234720000 235110000 1756900000 1888700000 121290000 1718000000 GMQFDRGYLSPYFINKPETGAVELE VEDGTGLQDELDVVEGMQFDRGYLSPYFIN PYFINKPETGAVELESPFILLADKKISNIR E G M L E S 1 1 1 1 0 1 3 3 0 1 2 1 1 2 2 1 1 0 2 1 0 0 25 2 2 3 2860.3742 P0A6F5 P0A6F5 192 216 groL 60 kDa chaperonin yes yes 3 9.1605E-06 58.974 By MS/MS By MS/MS 1 1 17265000 0 0 0 0 8078400 9186500 0 0 1557 68 1686 8884;8885 6652;6653 6653 2 0 0 0 0 124370000 139240000 0 0 GMQNTPDMR LLRELYFATEKQLRRGMQNTPDMRERVRHH EKQLRRGMQNTPDMRERVRHHQLQALALLR R G M M R E 0 1 1 1 0 1 0 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 9 0 0 1 1048.443 P27249 P27249 628 636 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0060499 50.607 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7757100 2453000 2628900 0 0 1267400 1407800 0 0 1558 320 1687 8886;8887;8888;8889 6654;6655;6656 6654 268 3 2453000 2690900 0 0 1528900 1559600 0 0 GMRVLYE ANPQRCPQINLIDREGMRVLYEKQDTAGSE QINLIDREGMRVLYEKQDTAGSELLPQAKD E G M Y E K 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 7 1 0 0 866.43202 P30177 P30177 249 255 ybiB Uncharacterized protein YbiB yes yes 2 0.016396 62.714 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 2 2 2 205200000 22649000 12417000 25714000 24376000 14605000 12345000 38630000 54461000 1559 332 1688;1689 8890;8891;8892;8893;8894;8895;8896;8897;8898;8899;8900;8901;8902;8903 6657;6658;6659;6660;6661;6662 6657 6 347990000 189360000 218480000 184810000 224850000 187110000 297310000 312540000 GMVLTGGGALLR LEQCPPELASDISERGMVLTGGGALLRNLD SERGMVLTGGGALLRNLDRLLMEETGIPVV R G M L R N 1 1 0 0 0 0 0 4 0 0 3 0 1 0 0 0 1 0 0 1 0 0 12 0 0 1 1143.6434 P0A9X4 P0A9X4 290 301 mreB Rod shape-determining protein MreB yes yes 2 0.0028056 76.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22394000 6456200 4942400 0 0 6088800 4906500 0 0 1560 180 1690 8904;8905;8906;8907 6663;6664;6665;6666 6663 4 6456200 5059100 0 0 7344900 5435300 0 0 GNASEIMALAGIANGGR HFCHELLSFKPAAIRGNASEIMALAGIANG ASEIMALAGIANGGRGVDTTDAAANAIPAA R G N G R G 4 1 2 0 0 0 1 4 0 2 1 0 1 0 0 1 0 0 0 0 0 0 17 0 1 4 1600.7991 P76423 P76423 126 142 thiM Hydroxyethylthiazole kinase yes yes 2;3 0 309.49 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 4 303640000 64261000 83105000 0 0 75100000 81170000 0 0 1561 426 1691;1692 8908;8909;8910;8911;8912;8913;8914;8915;8916;8917;8918;8919;8920;8921;8922 6667;6668;6669;6670;6671;6672;6673;6674;6675;6676;6677;6678;6679 6670 328 13 74063000 93385000 0 0 90593000 91247000 0 0 GNHEKVLQLQFIDP ______________________________ PGNHEKVLQLQFIDPDVRLISYSTRHPKHD P G N D P D 0 0 1 1 0 2 1 1 1 1 2 1 0 1 1 0 0 0 0 1 0 0 14 1 1 0 1636.8573 P0A8E1 P0A8E1 14 27 ycfP UPF0227 protein YcfP yes yes 2;3 0.010097 34.887 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 26527000 999970 1942300 0 0 9300900 14284000 0 0 1562 143 1693 8923;8924;8925;8926;8927;8928 6680;6681;6682 6682 3 6036400 11625000 0 0 13242000 20361000 0 0 GNPCVEAVLEK EPQPDLVIIGNAMTRGNPCVEAVLEKNIPY AMTRGNPCVEAVLEKNIPYMSGPQWLHDFV R G N E K N 1 0 1 0 1 0 2 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 11 0 2 2 1214.5965 P37773 P37773 74 84 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.000618 70.363 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 88076000 26155000 19022000 0 0 15242000 17631000 10026000 0 1563 360 1694 8929;8930;8931;8932;8933 6683;6684;6685;6686 6683 4 26155000 19470000 0 0 18387000 19531000 77162000 0 GNQLLPVSLVK SVDRLLQLSQGQAVKGNQLLPVSLVKRKTT QAVKGNQLLPVSLVKRKTTLAPNTQTASPR K G N V K R 0 0 1 0 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 2 0 0 11 0 0 1 1166.7023 B8LFD5;P03023 B8LFD5 318 328 lacI Lactose operon repressor yes no 2 0.012226 53.327 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20197000 5640400 4355100 0 0 4989800 5211500 0 0 1564 0 1695 8934;8935;8936;8937 6687;6688;6689 6687 3 5640400 4457900 0 0 6019200 5773100 0 0 GNRCDGEIINIGNP IRDGIEALYRIIENAGNRCDGEIINIGNPE AGNRCDGEIINIGNPENEASIEELGEMLLA A G N N P E 0 1 3 1 1 0 1 3 0 3 0 0 0 0 1 0 0 0 0 0 0 0 14 1 1 0 1527.71 P77398 P77398 555 568 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 6.8876E-05 69.979 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 112780000 14889000 15870000 0 0 16657000 65370000 0 0 1565 432 1696 8938;8939;8940;8941 6690;6691;6692;6693 6691 4 89876000 94980000 0 0 23714000 93184000 0 0 GNRVTVDGEIVR QQLGVSRAIAGREIRGNRVTVDGEIVRNAA EIRGNRVTVDGEIVRNAAFKLLPEHDVAYD R G N V R N 0 2 1 1 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 3 0 0 12 1 1 0 1313.7052 P0AA43 P0AA43 24 35 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3 7.5259E-11 116.24 By MS/MS By MS/MS 1 1 23922000 10416000 13506000 0 0 0 0 0 0 1566 183 1697 8942;8943 6694;6695 6695 2 10416000 13825000 0 0 0 0 0 0 GNTGENLLALLEGR ERQFRNYYKEAARLKGNTGENLLALLEGRL KGNTGENLLALLEGRLDNVVYRMGFGATRA K G N G R L 1 1 2 0 0 0 2 3 0 0 4 0 0 0 0 0 1 0 0 0 0 0 14 0 2 1 1455.7682 P0A7V8 P0A7V8 84 97 rpsD 30S ribosomal protein S4 yes yes 2 9.7644E-31 142.1 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 626610000 127170000 197940000 0 0 113800000 187700000 0 0 1567 130 1698 8944;8945;8946;8947;8948;8949;8950 6696;6697;6698;6699 6698 4 161670000 222880000 0 0 137280000 207930000 0 0 GNTLPMRNIP AGDQIQSGVDAAIKPGNTLPMRNIPVGSTV AAIKPGNTLPMRNIPVGSTVHNVEMKPGKG P G N I P V 0 1 2 0 0 0 0 1 0 1 1 0 1 0 2 0 1 0 0 0 0 0 10 1 0 1 1111.5808 P60422 P60422 127 136 rplB 50S ribosomal protein L2 yes yes 2 0.0014695 85.064 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 103240000 6595700 6758700 0 0 46392000 43488000 0 0 1568 379 1699;1700;1701 8951;8952;8953;8954;8955;8956;8957;8958;8959;8960 6700;6701;6702;6703;6704 6702 299 65 4 39815000 40451000 0 0 66048000 61993000 0 0 GNVEYWVALIQPGK PITEKPLAVRMGKGKGNVEYWVALIQPGKV KGNVEYWVALIQPGKVLYEMDGVPEELARE K G N G K V 1 0 1 0 0 1 1 2 0 1 1 1 0 0 1 0 0 1 1 2 0 0 14 0 1 2 1572.83 P0ADY7 P0ADY7 87 100 rplP 50S ribosomal protein L16 yes yes 2 8.4472E-11 93.058 By MS/MS By MS/MS 1 1 81090000 40423000 40667000 0 0 0 0 0 0 1569 229 1702 8961;8962 6705;6706 6706 2 40423000 41627000 0 0 0 0 0 0 GNWQQVLVFTR DKKRKRELLSHMIGKGNWQQVLVFTRTKHG MIGKGNWQQVLVFTRTKHGANHLAEQLNKD K G N T R T 0 1 1 0 0 2 0 1 0 0 1 0 0 1 0 0 1 1 0 2 0 0 11 0 0 0 1346.7095 P25888 P25888 243 253 rhlE ATP-dependent RNA helicase RhlE yes yes 2 3.6317E-65 179.8 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 231760000 57661000 63468000 0 0 51344000 59288000 0 0 1570 318 1703 8963;8964;8965;8966 6707;6708;6709;6710;6711 6709 5 57661000 64966000 0 0 61936000 65678000 0 0 GNYSMGVR IRDFRGLSAKSFDGRGNYSMGVREQIIFPE AKSFDGRGNYSMGVREQIIFPEIDYDKVDR R G N V R E 0 1 1 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 1 1 0 0 8 0 0 0 882.40179 P62399 P62399 126 133 rplE 50S ribosomal protein L5 yes yes 2 8.1302E-12 131.3 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 71329000 17103000 24599000 0 0 14995000 14632000 0 0 1571 388 1704 8967;8968;8969;8970 6712;6713;6714 6714 3 17103000 25179000 0 0 18089000 16209000 0 0 GNYVADLGAMVVTGLGGNPMAVVSK EARDRVGGRVATFRKGNYVADLGAMVVTGL VVTGLGGNPMAVVSKQVNMELAKIKQKCPL K G N S K Q 3 0 2 1 0 0 0 5 0 0 2 1 2 0 1 1 1 0 1 5 0 0 25 0 0 4 2419.224 LSD1-FL-His LSD1-FL-His 325 349 yes yes 3 1.2445E-40 110.68 By matching By MS/MS By MS/MS By MS/MS 1 3 6 4 752020000 33116000 72065000 0 0 481220000 165620000 0 0 1572 24 1705;1706;1707 8971;8972;8973;8974;8975;8976;8977;8978;8979;8980;8981;8982;8983;8984 6715;6716;6717;6718;6719;6720;6721;6722;6723 6722 45;46 9 33116000 73765000 0 0 714040000 237280000 0 0 GPAYTEMSLFAR IGGICNNSGGSLVQRGPAYTEMSLFARINE VQRGPAYTEMSLFARINEDGKLTLVNHLGI R G P A R I 2 1 0 0 0 0 1 1 0 0 1 0 1 1 1 1 1 0 1 0 0 0 12 0 1 3 1341.6387 P06149 P06149 167 178 dld D-lactate dehydrogenase yes yes 2 2.6768E-11 75.294 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 13688000 3065500 5396100 0 0 679600 4546300 0 0 1573 50 1708 8985;8986;8987;8988;8989;8990 6724;6725;6726;6727 6726 4 3065500 8212800 0 0 967530 5036300 0 0 GPFIDLHLLK ______________________________ RSLKKGPFIDLHLLKKVEKAVESGDKKPLR K G P L K K 0 0 0 1 0 0 0 1 1 1 3 1 0 1 1 0 0 0 0 0 0 0 10 0 0 1 1151.6703 P0A7U3 P0A7U3 8 17 rpsS 30S ribosomal protein S19 yes yes 2;3 6.1788E-05 106.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 74310000 15091000 14607000 0 0 21514000 23097000 0 0 1574 126 1709 8991;8992;8993;8994;8995;8996;8997;8998 6728;6729;6730;6731;6732;6733;6734;6735 6734 8 15091000 14951000 0 0 25953000 25587000 0 0 GPFMMDR FVRSKLKEYQYQEVKGPFMMDRVLWEKTGH EYQYQEVKGPFMMDRVLWEKTGHWDNYKDA K G P D R V 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 0 0 7 0 0 1 852.36223 P0A8M3 P0A8M3 295 301 thrS Threonine--tRNA ligase yes yes 2 0.0031128 74.439 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55953000 11935000 13948000 0 0 14045000 16026000 0 0 1575 147 1710 8999;9000;9001;9002 6736;6737;6738;6739 6737 4 11935000 14277000 0 0 16943000 17753000 0 0 GPFPIIV QAFLLYQEPVLGPVRGPFPIIV________ EPVLGPVRGPFPIIV_______________ R G P I V - 0 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 0 1 0 0 7 0 0 2 741.44251 CON__P02666 CON__P02666 203 209 yes yes 1 3.7018E-12 102.87 By matching By MS/MS By MS/MS By matching 3 3 3 3 325890000 60862000 61462000 0 0 95005000 108560000 0 0 + 1576 8 1711 9003;9004;9005;9006;9007;9008;9009;9010;9011;9012;9013;9014 6740 6740 0 349140000 366260000 0 0 1036100000 1116900000 0 0 GPGNPMEQPK ANPMALPFVSKLIPRGPGNPMEQPKDAKGT KLIPRGPGNPMEQPKDAKGTGTESGIQPQY R G P P K D 0 0 1 0 0 1 1 2 0 0 0 1 1 0 3 0 0 0 0 0 0 0 10 0 1 3 1053.4913 P15877 P15877 621 630 gcd Quinoprotein glucose dehydrogenase yes yes 2 0.011248 49.96 By MS/MS 1 1919300 0 0 0 0 1919300 0 0 0 1577 284 1712 9015 6741 6741 0 0 0 0 0 2315300 0 0 0 GPHVPNMR KPGLYFHEEYVDMCRGPHVPNMRFCHHFKL EYVDMCRGPHVPNMRFCHHFKLMKTAGAYW R G P M R F 0 1 1 0 0 0 0 1 1 0 0 0 1 0 2 0 0 0 0 1 0 0 8 0 0 2 906.4494 P0A8M3 P0A8M3 184 191 thrS Threonine--tRNA ligase yes yes 2 0.0061343 59.609 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 25547000 4634500 8805900 0 0 6110500 5996000 0 0 1578 147 1713 9016;9017;9018;9019 6742;6743 6742 2 4634500 9013700 0 0 7371100 6642300 0 0 GPIPLPTR AEIVETAKRTGAQVRGPIPLPTRKERFTVL RTGAQVRGPIPLPTRKERFTVLISPHVNKD R G P T R K 0 1 0 0 0 0 0 1 0 1 1 0 0 0 3 0 1 0 0 0 0 0 8 0 0 3 849.50724 P0A7R5 P0A7R5 38 45 rpsJ 30S ribosomal protein S10 yes yes 2 8.0146E-07 116.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 332370000 77722000 66025000 0 0 68363000 120260000 0 0 1579 120 1714 9020;9021;9022;9023 6744;6745;6746;6747 6744 3 77722000 67584000 0 0 82466000 133220000 0 0 GPIPLPTRK AEIVETAKRTGAQVRGPIPLPTRKERFTVL TGAQVRGPIPLPTRKERFTVLISPHVNKDA R G P R K E 0 1 0 0 0 0 0 1 0 1 1 1 0 0 3 0 1 0 0 0 0 0 9 1 0 3 977.6022 P0A7R5 P0A7R5 38 46 rpsJ 30S ribosomal protein S10 yes yes 2 0.006459 54.157 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46496000 17721000 9689000 0 0 7433700 11653000 0 0 1580 120 1715 9024;9025;9026;9027 6748;6749;6750 6749 3 17721000 9917700 0 0 8967300 12909000 0 0 GPKRGGFESYQERVEGNKVRERSP EPNSINDNWPRETPPGPKRGGFESYQERVE YQERVEGNKVRERSPSFGEYYSHPRLFWLS P G P S P S 0 4 1 0 0 1 4 4 0 0 0 2 0 1 2 2 0 0 1 2 0 0 24 6 4 1 2761.4008 P21179 P21179 476 499 katE Catalase HPII yes yes 5 0.0053077 20.657 By MS/MS By MS/MS 1 1 14493000 0 0 0 0 10824000 3669600 0 0 1581 293 1716 9028;9029 6751;6752 6752 2 0 0 0 0 15409000 5231000 0 0 GPLDHDGFSAVEAIAPGVIER LGRVVNTLGAPIDGKGPLDHDGFSAVEAIA GFSAVEAIAPGVIERQSVDQPVQTGYKAVD K G P E R Q 3 1 0 2 0 0 2 3 1 2 1 0 0 1 2 1 0 0 0 2 0 0 21 0 2 5 2149.0804 P0ABB0 P0ABB0 119 139 atpA ATP synthase subunit alpha yes yes 3 1.1116E-27 103.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43944000 11175000 9791300 0 0 9751100 13226000 0 0 1582 193 1717 9030;9031;9032;9033 6753;6754;6755;6756 6755 4 11175000 10022000 0 0 11763000 14652000 0 0 GPLNLPNLTR IAEACAKGEADNGRKGPLNLPNLTRLGLAK DNGRKGPLNLPNLTRLGLAKAHEGSTGFIP K G P T R L 0 1 2 0 0 0 0 1 0 0 3 0 0 0 2 0 1 0 0 0 0 0 10 0 0 2 1093.6244 P0A6K6 P0A6K6 49 58 deoB Phosphopentomutase yes yes 2 3.3527E-28 147.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45700000 11866000 10325000 0 0 11876000 11634000 0 0 1583 75 1718 9034;9035;9036;9037 6757;6758;6759;6760 6760 4 11866000 10568000 0 0 14325000 12888000 0 0 GPTLLEDFILR VRIADDQNSLRAGSRGPTLLEDFILREKIT AGSRGPTLLEDFILREKITHFDHERIPERI R G P L R E 0 1 0 1 0 0 1 1 0 1 3 0 0 1 1 0 1 0 0 0 0 0 11 0 1 1 1272.7078 P21179 P21179 101 111 katE Catalase HPII yes yes 2 3.3069E-79 186.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 423440000 85683000 92282000 0 0 129200000 116280000 0 0 1584 293 1719 9038;9039;9040;9041 6761;6762;6763;6764 6764 4 85683000 94460000 0 0 155850000 128820000 0 0 GPVATVLVR MASGAVIESFLDKGRGPVATVLVREGTLHK FLDKGRGPVATVLVREGTLHKGDIVLCGFE R G P V R E 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 3 0 0 9 0 0 2 910.56 P0A705;P0A705-3;P0A705-2 P0A705 579 587 infB Translation initiation factor IF-2 yes no 2 0.0001093 104.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64095000 18563000 14527000 0 0 14943000 16061000 0 0 1585 90 1720 9042;9043;9044;9045 6765;6766;6767;6768 6767 4 18563000 14870000 0 0 18026000 17792000 0 0 GPVTLEQLAAAPWILR DELVVFAAPTSPLARGPVTLEQLAAAPWIL PVTLEQLAAAPWILRERGSGTREIVDYLLL R G P L R E 3 1 0 0 0 1 1 1 0 1 3 0 0 0 2 0 1 1 0 1 0 0 16 0 1 5 1733.9828 P0ACR4 P0ACR4 176 191 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2;3 0 271.14 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1022000000 257840000 317410000 0 0 161530000 285230000 0 0 1586 218 1721 9046;9047;9048;9049;9050;9051;9052;9053 6769;6770;6771;6772;6773;6774;6775 6769 7 257840000 324910000 0 0 194860000 315970000 0 0 GPYESGSGHSSGLGHQESR SYGPHGYGSGRSSSRGPYESGSGHSSGLGH SGSGHSSGLGHQESRSGQSSGYGQHGSSSG R G P S R S 0 1 0 0 0 1 2 5 2 0 1 0 0 0 1 5 0 0 1 0 0 0 19 0 2 1 1927.8409 CON__Q86YZ3 CON__Q86YZ3 572 590 yes yes 3 2.1517E-28 116.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28242000 6444300 6015000 0 0 7996200 7786500 0 0 + 1587 22 1722 9054;9055;9056;9057 6776;6777;6778;6779 6778 4 6444300 6156900 0 0 9645900 8625700 0 0 GPYESGSGHSSGLGHR SYGPYRSGSGWSSSRGPYESGSGHSSGLGH PYESGSGHSSGLGHRESRSGQSSGYGQHGS R G P H R E 0 1 0 0 0 0 1 5 2 0 1 0 0 0 1 4 0 0 1 0 0 0 16 0 1 1 1583.7077 CON__Q86YZ3 CON__Q86YZ3 1038 1053 yes no 2;3 7.6447E-69 164.09 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 3 202500000 59942000 47326000 0 0 47611000 47621000 0 0 + 1588 22 1723 9058;9059;9060;9061;9062;9063;9064;9065;9066 6780;6781;6782;6783;6784;6785;6786 6786 7 59942000 48443000 0 0 61778000 59258000 0 0 GQESEVTGVK GDVIGDLSRRRGMLKGQESEVTGVKIHAEV RGMLKGQESEVTGVKIHAEVPLSEMFGYAT K G Q V K I 0 0 0 0 0 1 2 2 0 0 0 1 0 0 0 1 1 0 0 2 0 0 10 0 2 0 1032.5088 P0A6M8 P0A6M8 644 653 fusA Elongation factor G yes yes 2 0.00013235 96.948 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29755000 7932000 7822500 0 0 8065800 5934500 0 0 1589 76 1724 9067;9068;9069;9070 6787;6788;6789 6787 3 7932000 8007100 0 0 9729800 6574100 0 0 GQFSEVYK RCSLADFQIEKKIGRGQFSEVYKATCLLDR IEKKIGRGQFSEVYKATCLLDRKTVALKKV R G Q Y K A 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 0 0 1 1 0 0 8 0 1 0 956.46035 GST-Nek6 GST-Nek6 285 292 yes yes 2 1.427E-06 102.71 By MS/MS By MS/MS 1 1 523870000 0 0 0 0 270800000 253070000 0 0 1590 23 1725 9071;9072 6790;6791 6791 1 0 0 0 0 326670000 280350000 0 0 GQFSEVYKATCLLDR RCSLADFQIEKKIGRGQFSEVYKATCLLDR GQFSEVYKATCLLDRKTVALKKVQIFEMMD R G Q D R K 1 1 0 1 1 1 1 1 0 0 2 1 0 1 0 1 1 0 1 1 0 0 15 1 1 1 1785.872 GST-Nek6 GST-Nek6 285 299 yes yes 2 0.0030189 63.128 By MS/MS By matching 1 1 0 0 0 0 0 0 0 0 0 1591 23 1726 9073;9074 6792 6792 39 0 0 0 0 0 0 0 0 0 GQGIVLNEPSVVAIR LSIDLGTANTLIYVKGQGIVLNEPSVVAIR GQGIVLNEPSVVAIRQDRAGSPKSVAAVGH K G Q I R Q 1 1 1 0 0 1 1 2 0 2 1 0 0 0 1 1 0 0 0 3 0 0 15 0 1 2 1550.878 P0A9X4 P0A9X4 28 42 mreB Rod shape-determining protein MreB yes yes 2 9.153E-05 69.451 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40567000 9042800 10204000 0 0 11370000 9950000 0 0 1592 180 1727 9075;9076;9077;9078 6793;6794;6795;6796 6795 4 9042800 10445000 0 0 13716000 11022000 0 0 GQIDTLRDE AAGIAEDVKISELSEGQIDTLRDEVAKFVV ISELSEGQIDTLRDEVAKFVVEGDLRREIS E G Q D E V 0 1 0 2 0 1 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 1 0 0 1045.504 P0A7S9 P0A7S9 51 59 rpsM 30S ribosomal protein S13 yes yes 2 0.00027429 83.265 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 44325000 7920800 0 5341100 0 6928900 5268900 9401200 9464300 1593 123 1728 9079;9080;9081;9082;9083;9084 6797;6798 6798 2 121700000 0 45382000 0 106680000 79858000 72354000 54314000 GQIIDVTPSLYTVQLAGTSGK GYGRDEVKRNTEIFRGQIIDVTPSLYTVQL TPSLYTVQLAGTSGKLDAFLASIRDVAKIV R G Q G K L 1 0 0 1 0 2 0 3 0 2 2 1 0 0 1 2 3 0 1 2 0 0 21 0 0 2 2147.1474 P00894 P00894 110 130 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 8.616E-53 142.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55940000 14258000 18369000 0 0 9303600 14010000 0 0 1594 30 1729 9085;9086;9087;9088 6799;6800;6801;6802 6800 4 14258000 18803000 0 0 11223000 15520000 0 0 GQKLAGALKVHVDE DTVDIENYISVPKTEGQKLAGALKVHVDEY EGQKLAGALKVHVDEYDVDVIDSQSASKLI E G Q D E Y 2 0 0 1 0 1 1 2 1 0 2 2 0 0 0 0 0 0 0 2 0 0 14 2 0 2 1463.8096 P35340 P35340 266 279 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3;4 8.9519E-16 95.981 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 3 2 3 865110000 124520000 128840000 71133000 111590000 85955000 76366000 83938000 182770000 1595 348 1730 9089;9090;9091;9092;9093;9094;9095;9096;9097;9098;9099;9100;9101;9102;9103;9104;9105;9106;9107;9108;9109 6803;6804;6805;6806;6807;6808;6809;6810;6811;6812;6813;6814;6815 6805 11 1895100000 1964900000 604410000 846040000 1323400000 1157400000 646010000 1048900000 GQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVE DTVDIENYISVPKTEGQKLAGALKVHVDEY IDSQSASKLIPAAVEGGLHQIETASGAVLK E G Q V E G 5 0 0 4 0 2 2 2 1 2 3 3 0 0 1 3 0 0 1 5 0 0 34 3 1 6 3564.8675 P35340 P35340 266 299 ahpF Alkyl hydroperoxide reductase subunit F yes yes 4 9.1855E-15 79.898 By MS/MS By MS/MS 1 1 45797000 0 0 0 0 18016000 27781000 0 0 1596 348 1731 9110;9111 6816;6817 6816 2 0 0 0 0 277370000 421060000 0 0 GQLDDKEIE EPSAARQAFRKKLREGQLDDKEIEIDLAAA RKKLREGQLDDKEIEIDLAAAPMGVEIMAP E G Q I E I 0 0 0 2 0 1 2 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 9 1 1 0 1045.4928 P0A6H5 P0A6H5 166 174 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.011571 51.346 By MS/MS 1 0 0 0 0 0 0 0 0 0 1597 71 1732 9112 6818 6818 1 0 0 0 0 0 0 0 0 GQLGVQLFDRVGKRLVVNE ALSQSAVSAALTDLEGQLGVQLFDRVGKRL VQLFDRVGKRLVVNEHGRLLYPRALALLEQ E G Q N E H 0 2 1 1 0 2 1 3 0 0 3 1 0 1 0 0 0 0 0 4 0 0 19 3 0 0 2126.196 P0ACR4 P0ACR4 43 61 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 3 0.0023226 40.856 By MS/MS 1 3810400 0 0 0 0 3810400 0 0 0 1598 218 1733 9113 6819 6819 1 0 0 0 0 58665000 0 0 0 GQNEDQNVGIK GVALIRVASKLADLRGQNEDQNVGIKVALR ADLRGQNEDQNVGIKVALRAMEAPLRQIVL R G Q I K V 0 0 2 1 0 2 1 2 0 1 0 1 0 0 0 0 0 0 0 1 0 0 11 0 1 0 1200.5735 P0A6F5 P0A6F5 431 441 groL 60 kDa chaperonin yes yes 2 1.4793E-64 176.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1553900000 319140000 452460000 0 0 417910000 364390000 0 0 1599 68 1734 9114;9115;9116;9117;9118 6820;6821;6822;6823;6824;6825 6822 6 319140000 463140000 0 0 504120000 403670000 0 0 GQNIALVSDAGTPLINDPGYHLVRTCRE NEQQKAETLLAKLQEGQNIALVSDAGTPLI LINDPGYHLVRTCREAGIRVVPLPGPCAAI E G Q R E A 2 2 2 2 1 1 1 3 1 2 3 0 0 0 2 1 2 0 1 2 0 0 28 2 0 4 3065.5353 P67087 P67087 84 111 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 4 0.0018251 22.755 By MS/MS By MS/MS 1 1 7132200 0 0 0 0 3278100 3854100 0 0 1600 400 1735 9119;9120 6826 6826 1 0 0 0 0 50470000 58414000 0 0 GQNLKFNVEVVAIREA VEDDHVVVDGNHMLAGQNLKFNVEVVAIRE QNLKFNVEVVAIREATEEELAHGHVHGAHD A G Q E A T 2 1 2 0 0 1 2 1 0 1 1 1 0 1 0 0 0 0 0 3 0 0 16 2 2 1 1785.9737 P0A9K9 P0A9K9 127 142 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 1.1732E-13 85.493 By MS/MS By MS/MS By MS/MS 1 1 1 13294000 256290 0 0 0 6557300 6480700 0 0 1601 169 1736 9121;9122;9123 6827;6828 6828 2 1547100 0 0 0 9335600 9238200 0 0 GQSLQDPFLNALR ______________________________ AKGQSLQDPFLNALRRERVPVSIYLVNGIK K G Q L R R 1 1 1 1 0 2 0 1 0 0 3 0 0 1 1 1 0 0 0 0 0 0 13 0 0 2 1457.7627 P0A6X3 P0A6X3 4 16 hfq RNA-binding protein Hfq yes yes 2 1.9468E-235 248.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 649180000 146960000 178570000 0 0 162090000 161560000 0 0 1602 84 1737 9124;9125;9126;9127 6829;6830;6831;6832;6833;6834;6835;6836;6837 6834 9 146960000 182780000 0 0 195530000 178970000 0 0 GQSLQDPFLNALRR ______________________________ KGQSLQDPFLNALRRERVPVSIYLVNGIKL K G Q R R E 1 2 1 1 0 2 0 1 0 0 3 0 0 1 1 1 0 0 0 0 0 0 14 1 0 2 1613.8638 P0A6X3 P0A6X3 4 17 hfq RNA-binding protein Hfq yes yes 3 3.6233E-14 111.12 By MS/MS By MS/MS By MS/MS 1 1 1 49695000 21174000 20694000 0 0 7827600 0 0 0 1603 84 1738 9128;9129;9130 6838;6839;6840 6838 3 21174000 21182000 0 0 9442400 0 0 0 GQTLLKP MCIFQHQYLAEHKTPGQTLLKPTAQ_____ YLAEHKTPGQTLLKPTAQ____________ P G Q K P T 0 0 0 0 0 1 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 7 1 0 0 755.45414 P0A951 P0A951 177 183 speG Spermidine N(1)-acetyltransferase yes yes 2 0.00079907 79.454 By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 28112000 3341100 3267400 0 0 343090 17117000 0 4043400 1604 160 1739 9131;9132;9133;9134;9135 6841 6841 1 20169000 19556000 0 0 488450 24400000 0 23204000 GQTLLVIANLSR LPNSPVLWCYRREWKGQTLLVIANLSREIQ EWKGQTLLVIANLSREIQPWQAGQMRGNWQ K G Q S R E 1 1 1 0 0 1 0 1 0 1 3 0 0 0 0 1 1 0 0 1 0 0 12 0 0 1 1283.7561 P28904 P28904 496 507 treC Trehalose-6-phosphate hydrolase yes yes 2 0.0073005 48.284 By MS/MS 1 3028100 0 0 0 0 0 3028100 0 0 1605 328 1740 9136 6842 6842 1 0 0 0 0 0 3354500 0 0 GQTVRLE YAVFQSGGKQHRVSEGQTVRLEKLDIATGE GKQHRVSEGQTVRLEKLDIATGETVEFAEV E G Q L E K 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 1 0 0 801.43447 P0AG48 P0AG48 17 23 rplU 50S ribosomal protein L21 yes yes 2 6.0761E-05 94.539 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 3 1 1 1 134220000 28637000 30707000 0 477030 40493000 33909000 0 0 1606 258 1741 9137;9138;9139;9140;9141;9142;9143 6843;6844;6845;6846 6845 2 440000000 441810000 0 3616700 623420000 513940000 0 0 GQVGGDVNVEMDAAPGVDLSR AYLKKNHEEEMNALRGQVGGDVNVEMDAAP VNVEMDAAPGVDLSRILNEMRDQYEKMAEK R G Q S R I 2 1 1 3 0 1 1 4 0 0 1 0 1 0 1 1 0 0 0 4 0 0 21 0 1 3 2084.9797 CON__P02533;CON__Q6IFX2 CON__P02533 262 282 yes no 2 1.3707E-35 108.71 By matching By matching By MS/MS 1 1 1 17367000 4627900 4245700 0 0 0 8493300 0 0 + 1607 4 1742 9144;9145;9146 6847 6847 0 1 4627900 4345900 0 0 0 9408700 0 0 GQVLAKPGTIKPHTK VGVLLRGIKREEIERGQVLAKPGTIKPHTK GQVLAKPGTIKPHTKFESEVYILSKDEGGR R G Q T K F 1 0 0 0 0 1 0 2 1 1 1 3 0 0 2 0 2 0 0 1 0 0 15 2 0 3 1573.9304 P0CE48;P0CE47 P0CE48 290 304 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3;4 1.3005E-10 88.768 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 131140000 33935000 31923000 0 0 26993000 38290000 0 0 1608 269 1743 9147;9148;9149;9150;9151;9152;9153;9154 6848;6849;6850;6851;6852;6853;6854 6853 6 33935000 32677000 0 0 32561000 42416000 0 0 GQYGHVVIDMYPLEPGSNPK VTDVEGKHAKQSGGRGQYGHVVIDMYPLEP VVIDMYPLEPGSNPKGYEFINDIKGGVIPG R G Q P K G 0 0 1 1 0 1 1 3 1 1 1 1 1 0 3 1 0 0 2 2 0 0 20 0 1 3 2200.0623 P0A6M8 P0A6M8 513 532 fusA Elongation factor G yes yes 3 0.00023671 43.116 By MS/MS By MS/MS 1 1 10303000 6986600 0 0 0 3316000 0 0 0 1609 76 1744 9155;9156 6855 6855 1 6986600 0 0 0 4000000 0 0 0 GQYTAGFAQGK LRRIDRSNVREKTVRGQYTAGFAQGKKVPG KTVRGQYTAGFAQGKKVPGYLEEEGANKSS R G Q G K K 2 0 0 0 0 2 0 3 0 0 0 1 0 1 0 0 1 0 1 0 0 0 11 0 0 2 1126.5407 P0AC53 P0AC53 286 296 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.0014218 66.621 By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 17656000 5848000 3150000 0 0 3942100 4715900 0 0 1610 205 1745 9157;9158;9159;9160;9161 6856;6857;6858 6856 3 42175000 3224400 0 0 4755300 5224200 0 0 GRALLAAFDFPFRK GLDITITTTAKSDEEGRALLAAFDFPFRK_ EGRALLAAFDFPFRK_______________ E G R R K - 3 2 0 1 0 0 0 1 0 0 2 1 0 3 1 0 0 0 0 0 0 0 14 2 0 4 1607.8936 P62399 P62399 166 179 rplE 50S ribosomal protein L5 yes yes 3 0.0016591 48.112 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9522400 0 270190 0 0 2690700 2208800 1525700 2827000 1611 388 1746 9162;9163;9164;9165;9166 6859 6859 1 0 4120400 0 0 41426000 33477000 11742000 16224000 GRGGDHSILGAQDVVHFAELHGLNSR TELIFIAALFHDIAKGRGGDHSILGAQDVV QDVVHFAELHGLNSRETQLVAWLVRQHLLM K G R S R E 2 2 1 2 0 1 1 5 3 1 3 0 0 1 0 2 0 0 0 2 0 0 26 1 1 2 2741.3746 P27249 P27249 519 544 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 5 0.01382 17.907 By MS/MS By MS/MS 1 1 12876000 8517100 0 0 0 0 4359200 0 0 1612 320 1747 9167;9168 6860;6861 6860 2 8517100 0 0 0 0 4829000 0 0 GRGVMVLDDEDRE TPFERVENALAALREGRGVMVLDDEDRENE REGRGVMVLDDEDRENEGDMIFPAETMTVE E G R R E N 0 2 0 3 0 0 2 2 0 0 1 0 1 0 0 0 0 0 0 2 0 0 13 2 1 0 1489.6831 P0A7J0 P0A7J0 26 38 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2;3 9.6661E-12 93.011 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 2 2 2 227490000 67192000 53953000 11063000 13456000 22062000 15274000 21184000 23311000 1613 105 1748;1749 9169;9170;9171;9172;9173;9174;9175;9176;9177;9178;9179;9180;9181;9182;9183;9184;9185;9186;9187 6862;6863;6864;6865;6866;6867;6868;6869;6870;6871;6872;6873;6874;6875;6876 6865 114 14 1032400000 822790000 94001000 102010000 339670000 231500000 163040000 133780000 GRGVMVLDDEDRENE TPFERVENALAALREGRGVMVLDDEDRENE GRGVMVLDDEDRENEGDMIFPAETMTVEQM E G R N E G 0 2 1 3 0 0 3 2 0 0 1 0 1 0 0 0 0 0 0 2 0 0 15 2 2 0 1732.7686 P0A7J0 P0A7J0 26 40 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2;3 8.0912E-164 178.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 5 4 4 3 3 3 4 973860000 105290000 110710000 131600000 139960000 95301000 85489000 73490000 232000000 1614 105 1750;1751 9188;9189;9190;9191;9192;9193;9194;9195;9196;9197;9198;9199;9200;9201;9202;9203;9204;9205;9206;9207;9208;9209;9210;9211;9212;9213;9214;9215;9216;9217 6877;6878;6879;6880;6881;6882;6883;6884;6885;6886;6887;6888;6889;6890;6891;6892;6893;6894 6888 114 18 1552700000 1644900000 1118200000 1061100000 1467300000 1295700000 565590000 1331400000 GRIDLGLGRAP LVIAEQFGTLNTLYPGRIDLGLGRAPGSDQ TLYPGRIDLGLGRAPGSDQRTMMALRRHMS P G R A P G 1 2 0 1 0 0 0 3 0 1 2 0 0 0 1 0 0 0 0 0 0 0 11 2 0 1 1123.6462 P0ADV5 P0ADV5 104 114 yhbW Uncharacterized protein YhbW yes yes 3 0.0073855 31.185 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6995300 612350 864380 0 0 1851000 3667600 0 0 1615 226 1752 9218;9219;9220;9221 6895;6896 6896 2 3696500 5173300 0 0 2635300 5228100 0 0 GRKPAVATAPATGQVQSLTR ______________________________ VATAPATGQVQSLTRGLKLLEWIAESNGSV R G R T R G 4 2 0 0 0 2 0 2 0 0 1 1 0 0 2 1 3 0 0 2 0 0 20 2 0 6 2008.1178 P16528 P16528 10 29 iclR Acetate operon repressor yes yes 3;4 2.9993E-37 132.01 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 277480000 77851000 80945000 0 0 63972000 54709000 0 0 1616 285 1753 9222;9223;9224;9225;9226;9227;9228;9229 6897;6898;6899;6900;6901;6902;6903;6904 6901 8 77851000 82856000 0 0 77170000 60606000 0 0 GRLDSELR INNLRRQLDSIVGERGRLDSELRNMQDLVE DSIVGERGRLDSELRNMQDLVEDFKNKYED R G R L R N 0 2 0 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 1 1 0 944.50394 CON__P48668;CON__P04259;CON__P02538;CON__P13647 CON__P13647 238 245 no no 2 1.0849E-17 110.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 72328000 17006000 20072000 0 0 19928000 15322000 0 0 + 1617 13;5 1754 9230;9231;9232;9233 6905;6906;6907;6908 6908 2 17006000 20545000 0 0 24039000 16973000 0 0 GRLTVDELHPP GLLNDALAPVSERWPGRLTVDELHPPIPGY ERWPGRLTVDELHPPIPGYECPPNHQLVEV P G R P P I 0 1 0 1 0 0 1 1 1 0 2 0 0 0 2 0 1 0 0 1 0 0 11 1 1 1 1232.6513 P23908 P23908 291 301 argE Acetylornithine deacetylase yes yes 2;3 0.00015683 74.841 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 36674000 3493300 3066200 0 0 10566000 19548000 0 0 1618 308 1755 9234;9235;9236;9237;9238;9239;9240;9241 6909;6910;6911;6912 6911 1 21088000 18351000 0 0 15043000 27866000 0 0 GRNVVLDK VNVLADAVKVTLGPKGRNVVLDKSFGAPTI KVTLGPKGRNVVLDKSFGAPTITKDGVSVA K G R D K S 0 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 1 0 0 899.51886 P0A6F5 P0A6F5 35 42 groL 60 kDa chaperonin yes yes 2 0.0084746 69.998 By MS/MS By MS/MS 1 1 7840700 4315500 3525200 0 0 0 0 0 0 1619 68 1756 9242;9243 6913;6914 6913 2 4315500 3608400 0 0 0 0 0 0 GRPIVNLLPLEQDER SMKVYQLPEATRGARGRPIVNLLPLEQDER GRPIVNLLPLEQDERITAILPVTEFEEGVK R G R E R I 0 2 1 1 0 1 2 1 0 1 3 0 0 0 2 0 0 0 0 1 0 0 15 1 2 2 1747.9581 P0AES4 P0AES4 616 630 gyrA DNA gyrase subunit A yes yes 3 0.019416 26.781 By MS/MS By MS/MS By MS/MS 1 1 1 22611000 8319200 4396700 0 0 0 9895100 0 0 1620 238 1757 9244;9245;9246 6915 6915 1 8319200 4500500 0 0 0 10962000 0 0 GRRTSRRKRAKVE GSATPMETGIAETPEGRRTSRRKRAKVEYR PEGRRTSRRKRAKVEYREMDESLANLSEDE E G R V E Y 1 5 0 0 0 0 1 1 0 0 0 2 0 0 0 1 1 0 0 1 0 0 13 7 0 1 1598.9553 LSD1-FL-His LSD1-FL-His 109 121 yes yes 5 0.019571 12.165 By matching By MS/MS By MS/MS By matching 1 1 1 1 18084000 0 0 2286700 9624600 0 0 3002100 3170300 1621 24 1758 9247;9248;9249;9250 6916 6916 1 0 0 19430000 72970000 0 0 23105000 18194000 GRSQDLASQAE AVTLYLGAVAATVREGRSQDLASQAEESFV TVREGRSQDLASQAEESFVEAE________ E G R A E E 2 1 0 1 0 2 1 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 11 1 0 2 1160.5422 P0A7V0 P0A7V0 224 234 rpsB 30S ribosomal protein S2 yes yes 2 1.4053E-06 87.258 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 595210000 96021000 97380000 72401000 68035000 44214000 50219000 76487000 90453000 1622 128 1759 9251;9252;9253;9254;9255;9256;9257;9258 6917;6918;6919;6920;6921;6922 6917 6 1475300000 1485100000 615180000 515810000 680710000 761140000 588660000 519090000 GRSQDLASQAEE AVTLYLGAVAATVREGRSQDLASQAEESFV VREGRSQDLASQAEESFVEAE_________ E G R E E S 2 1 0 1 0 2 2 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1 2 1289.5848 P0A7V0 P0A7V0 224 235 rpsB 30S ribosomal protein S2 yes yes 2 9.6483E-32 147.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 894140000 91402000 81634000 164440000 177810000 31972000 28122000 144470000 174290000 1623 128 1760 9259;9260;9261;9262;9263;9264;9265;9266 6923;6924;6925;6926;6927;6928;6929;6930 6924 7 1404400000 1244900000 1397200000 1348100000 492230000 426230000 1111900000 1000200000 GRYHQVKRMFAAVGNHVVE LEVITPTQVRLTISEGRYHQVKRMFAAVGN QVKRMFAAVGNHVVELHRERIGGITLDADL E G R V E L 2 2 1 0 0 1 1 2 2 0 0 1 1 1 0 0 0 0 1 4 0 0 19 3 0 2 2197.1327 P0AA43 P0AA43 181 199 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4;5 0.00053516 36.112 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 4 1 3 147280000 14072000 10678000 0 0 37122000 60284000 14166000 10960000 1624 183 1761;1762 9267;9268;9269;9270;9271;9272;9273;9274;9275;9276;9277;9278;9279;9280;9281;9282 6931;6932;6933;6934;6935;6936;6937;6938;6939;6940 6940 175 10 216220000 162830000 0 0 571520000 913700000 109030000 62899000 GSAAHGYFQPYK HFDHERIPERIVHARGSAAHGYFQPYKSLS HARGSAAHGYFQPYKSLSDITKADFLSDPN R G S Y K S 2 0 0 0 0 1 0 2 1 0 0 1 0 1 1 1 0 0 2 0 0 0 12 0 0 3 1324.62 P21179 P21179 131 142 katE Catalase HPII yes yes 2;3 1.0668E-36 152.67 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 313210000 79006000 98650000 0 0 66858000 68697000 0 0 1625 293 1763 9283;9284;9285;9286;9287;9288;9289;9290 6941;6942;6943;6944;6945;6946;6947 6943 7 79006000 100980000 0 0 80651000 76101000 0 0 GSAPDAALYWYAR DRFYDLISALHKSVRGSAPDAALYWYARII VRGSAPDAALYWYARIITAGGDPLYVARRC R G S A R I 4 1 0 1 0 0 0 1 0 0 1 0 0 0 1 1 0 1 2 0 0 0 13 0 0 5 1439.6834 P0AAZ4 P0AAZ4 268 280 rarA Replication-associated recombination protein A yes yes 2 0.0021388 52.278 By MS/MS By matching By MS/MS 1 1 1 6912900 5055300 1857600 0 0 0 0 0 0 1626 189 1764 9291;9292;9293 6948;6949 6949 2 5055300 1901500 0 0 0 0 0 0 GSCGIGGGIGGGSSR MTTCSRQFTSSSSMKGSCGIGGGIGGGSSR GSCGIGGGIGGGSSRISSVLAGGSCRAPST K G S S R I 0 1 0 0 1 0 0 8 0 2 0 0 0 0 0 3 0 0 0 0 0 0 15 0 0 0 1277.5782 CON__P02533;CON__P08779 CON__P02533 16 30 no no 2 0.0056255 43.544 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10542000 2527400 2313600 0 0 2934800 2766200 0 0 + 1627 4;10 1765 9294;9295;9296;9297 6950;6951;6952 6951 3 2527400 2368300 0 0 3540300 3064400 0 0 GSDLVVTAIAEGR QTSNPKIFAGGDIVRGSDLVVTAIAEGRKA VRGSDLVVTAIAEGRKAADGIMNWLEV___ R G S G R K 2 1 0 1 0 0 1 2 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1 2 1286.683 P09832 P09832 448 460 gltD Glutamate synthase [NADPH] small chain yes yes 2 2.1823E-11 94.297 By MS/MS By MS/MS By matching 1 1 1 6446700 0 3833000 0 0 2613600 0 0 0 1628 65 1766 9298;9299;9300 6953;6954 6953 2 0 3923500 0 0 3152800 0 0 0 GSDYIGDQDAIEYMCK THEDNWEWHMYDTVKGSDYIGDQDAIEYMC SDYIGDQDAIEYMCKTGPEAILELEHMGLP K G S C K T 1 0 0 3 1 1 1 2 0 2 0 1 1 0 0 1 0 0 2 0 0 0 16 0 1 1 1863.7655 P0AC41 P0AC41 75 90 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 4.1339E-19 110.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26802000 6695800 6695200 0 0 5923400 7488200 0 0 1629 203 1767 9301;9302;9303;9304 6955;6956;6957 6956 3 6695800 6853200 0 0 7145400 8295200 0 0 GSENYALTTNQGVR DTRNEKLNSLEDVRKGSENYALTTNQGVRI KGSENYALTTNQGVRIADDQNSLRAGSRGP K G S V R I 1 1 2 0 0 1 1 2 0 0 1 0 0 0 0 1 2 0 1 1 0 0 14 0 1 1 1508.7219 P21179 P21179 74 87 katE Catalase HPII yes yes 2 7.1919E-126 204.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 125590000 27142000 39792000 0 0 27903000 30754000 0 0 1630 293 1768 9305;9306;9307;9308 6958;6959;6960;6961 6959 4 27142000 40731000 0 0 33659000 34069000 0 0 GSGSGQSPSSGQHGTGFGR QHSSGSGQSPGHGQRGSGSGQSPSSGQHGT GQSPSSGQHGTGFGRSSSSGPYVSGSGYSS R G S G R S 0 1 0 0 0 2 0 7 1 0 0 0 0 1 1 5 1 0 0 0 0 0 19 0 0 1 1746.767 CON__Q86YZ3 CON__Q86YZ3 430 448 yes yes 3 0.00094425 39.585 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11406000 1845500 2354800 0 0 3880600 3324900 0 0 + 1631 22 1769 9309;9310;9311;9312 6962 6962 1 1845500 2410400 0 0 4681200 3683300 0 0 GSITDLPNPKAKKK PTLHESVGLAAEVFEGSITDLPNPKAKKK_ EGSITDLPNPKAKKK_______________ E G S K K - 1 0 1 1 0 0 0 1 0 1 1 4 0 0 2 1 1 0 0 0 0 0 14 3 0 3 1495.8722 P0A9P0 P0A9P0 461 474 lpdA Dihydrolipoyl dehydrogenase yes yes 3;4 3.3663E-14 89.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 2 2 559650000 41267000 50108000 104190000 98727000 34740000 27812000 97123000 105680000 1632 172 1770 9313;9314;9315;9316;9317;9318;9319;9320;9321;9322;9323;9324;9325;9326 6963;6964;6965;6966;6967;6968;6969;6970 6963 8 634060000 764160000 885300000 748510000 534860000 421540000 747480000 606500000 GSLGGGFSSGGFSGGSFSR GGGGGVSSLRISSSKGSLGGGFSSGGFSGG GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 0 0 1706.7649 CON__P13645 CON__P13645 41 59 yes yes 2 3.0641E-186 218.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 503350000 52577000 59013000 0 0 159980000 231780000 0 0 + 1633 12 1771 9327;9328;9329;9330 6971;6972;6973;6974;6975 6974 5 52577000 60406000 0 0 192990000 256760000 0 0 GSLGHRETFA REHIPVLVYGPKVKPGSLGHRETFADIGQT PKVKPGSLGHRETFADIGQTLAKYFGTSDM P G S F A D 1 1 0 0 0 0 1 2 1 0 1 0 0 1 0 1 1 0 0 0 0 0 10 1 1 0 1073.5254 P0A6K6 P0A6K6 376 385 deoB Phosphopentomutase yes yes 2 0.018065 32.32 By matching By MS/MS By MS/MS 1 2 1 6008600 972060 1904800 0 0 0 3131800 0 0 1634 75 1772 9331;9332;9333;9334 6976 6976 1 14936000 18896000 0 0 0 4464300 0 0 GSPIKLIDGGKQKRCFTDIRDGIE GSSRAITQLILNLVEGSPIKLIDGGKQKRC GKQKRCFTDIRDGIEALYRIIENAGNRCDG E G S I E A 0 2 0 3 1 1 1 4 0 4 1 3 0 1 1 1 1 0 0 0 0 0 24 5 0 1 2702.4174 P77398 P77398 522 545 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 4 0.0013581 25.803 By matching By matching By MS/MS By MS/MS 1 1 1 1 15145000 1333800 2185800 0 0 6972600 4652300 0 0 1635 432 1773 9335;9336;9337;9338 6977;6978 6977 2 20493000 33334000 0 0 107350000 70512000 0 0 GSSGGGCFGGSSGGYGGLGGFGGGSFR GGFSSGGFSGGSFSRGSSGGGCFGGSSGGY GGYGGLGGFGGGSFRGSYGSSSFGGSYGGS R G S F R G 0 1 0 0 1 0 0 15 0 0 1 0 0 3 0 5 0 0 1 0 0 0 27 0 0 0 2341.9771 CON__P13645 CON__P13645 60 86 yes yes 2 1.68E-32 89.049 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 + 1636 12 1774 9339;9340 6979;6980 6980 2 0 0 0 0 0 0 0 0 GSSGNDYDLMAQP RADPWARGSYSYVAAGSSGNDYDLMAQPIT AAGSSGNDYDLMAQPITPGPSIPGAPQPIP A G S Q P I 1 0 1 2 0 1 0 2 0 0 1 0 1 0 1 2 0 0 1 0 0 0 13 0 0 1 1353.5507 LSD1-FL-His LSD1-FL-His 769 781 yes yes 2 3.4592E-13 105.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 514740000 57410000 66245000 0 0 233140000 157950000 0 0 1637 24 1775;1776 9341;9342;9343;9344;9345;9346;9347;9348 6981;6982;6983 6982 40 2 346560000 396470000 0 0 331920000 225160000 0 0 GSSLQQGFQKPAQAVNR EARAAVRGGKGGKRKGSSLQQGFQKPAQAV SLQQGFQKPAQAVNRDVVIGETITVGELAN K G S N R D 2 1 1 0 0 4 0 2 0 0 1 1 0 1 1 2 0 0 0 1 0 0 17 1 0 3 1814.9387 P0A705;P0A705-3;P0A705-2 P0A705 292 308 infB Translation initiation factor IF-2 yes no 3 2.1809E-12 81.632 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 47750000 12112000 12987000 0 0 11915000 10736000 0 0 1638 90 1777 9349;9350;9351;9352 6984;6985;6986;6987 6986 4 12112000 13294000 0 0 14373000 11893000 0 0 GSSLVRESDLA KELGYLGSLAICNVPGSSLVRESDLALMTN CNVPGSSLVRESDLALMTNAGTEIGVASTK P G S L A L 1 1 0 1 0 0 1 1 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 1 1 0 1132.5724 P17169 P17169 379 389 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 4.7704E-14 144.65 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 626470000 829150 113800000 0 0 186640000 325190000 0 0 1639 288 1778 9353;9354;9355;9356 6988;6989;6990;6991 6989 4 5005200 681120000 0 0 265710000 463560000 0 0 GSSSGGGYSSGSSSYGSGGR SNVASKAAFGGSGGRGSSSGGGYSSGSSSY GGYSSGSSSYGSGGRQSGSRGGSGGGGSIS R G S G R Q 0 1 0 0 0 0 0 8 0 0 0 0 0 0 0 9 0 0 2 0 0 0 20 0 0 0 1739.6983 CON__P35908v2;CON__P35908 CON__P35908v2 525 544 yes no 2 2.6407E-124 191.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 130530000 27946000 31357000 0 0 36417000 34813000 0 0 + 1640 16 1779 9357;9358;9359;9360 6992;6993;6994;6995 6993 4 27946000 32097000 0 0 43930000 38565000 0 0 GSTDYFVNAR TEHFFVPSTEKTFHRGSTDYFVNARKGDIG KTFHRGSTDYFVNARKGDIGAFDSPKFIGL R G S A R K 1 1 1 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 1 1 0 0 10 0 0 1 1128.52 P76104 P76104 295 304 ydcP Uncharacterized protease YdcP yes yes 2 0.0014493 80.438 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26152000 8146800 8155000 0 0 5903200 3947500 0 0 1641 416 1780 9361;9362;9363;9364 6996;6997;6998;6999 6997 4 8146800 8347500 0 0 7121100 4372900 0 0 GSTGFIPAGMDGNAE NLPNLTRLGLAKAHEGSTGFIPAGMDGNAE GSTGFIPAGMDGNAEVIGAYAWAHEMSSGK E G S A E V 2 0 1 1 0 0 1 4 0 1 0 0 1 1 1 1 1 0 0 0 0 0 15 0 0 3 1422.6085 P0A6K6 P0A6K6 67 81 deoB Phosphopentomutase yes yes 2 0.00021497 63.408 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 34040000 3889200 3358700 8862600 9553500 0 0 3036600 5339900 1642 75 1781 9365;9366;9367;9368;9369;9370 7000 7000 1 59757000 51220000 75304000 72431000 0 0 23370000 30645000 GSVAVLIK IHQGEKAETLYYIVKGSVAVLIKDEEGKEM TLYYIVKGSVAVLIKDEEGKEMILSYLNQG K G S I K D 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 8 0 0 1 785.50109 P0ACJ8 P0ACJ8 46 53 crp cAMP-activated global transcriptional regulator CRP yes yes 2 0.0020851 86.872 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1054800000 352620000 261610000 0 0 196360000 244250000 0 0 1643 213 1782 9371;9372;9373;9374 7001;7002;7003;7004 7004 4 352620000 267780000 0 0 236870000 270580000 0 0 GSVAVLIKDEEGK IHQGEKAETLYYIVKGSVAVLIKDEEGKEM VKGSVAVLIKDEEGKEMILSYLNQGDFIGE K G S G K E 1 0 0 1 0 0 2 2 0 1 1 2 0 0 0 1 0 0 0 2 0 0 13 1 2 1 1343.7296 P0ACJ8 P0ACJ8 46 58 crp cAMP-activated global transcriptional regulator CRP yes yes 2 3.2514E-101 231.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1716200000 460740000 504740000 0 0 335890000 414780000 0 0 1644 213 1783 9375;9376;9377;9378 7005;7006;7007 7005 3 460740000 516660000 0 0 405180000 459480000 0 0 GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR GGGSYGSGGGGGGGRGSYGSGGSSYGSGGG GHGSYGSGSSSGGYRGGSGGGGGGSSGGRG R G S Y R G 0 1 0 0 0 0 0 20 1 0 0 0 0 0 0 12 0 0 5 0 0 0 39 0 0 0 3311.3008 CON__P04264 CON__P04264 550 588 yes yes 3 2.0543E-275 233.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 325250000 47217000 64340000 0 0 104760000 108930000 0 0 + 1645 9 1784 9379;9380;9381;9382 7008;7009;7010 7009 3 47217000 65859000 0 0 126380000 120670000 0 0 GSYSHLAAR KINPHSARIAFLGPKGSYSHLAARQYAARH AFLGPKGSYSHLAARQYAARHFEQFIESGC K G S A R Q 2 1 0 0 0 0 0 1 1 0 1 0 0 0 0 2 0 0 1 0 0 0 9 0 0 2 960.47773 P0A9J8 P0A9J8 113 121 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 1.8538E-225 250.8 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 568480000 135230000 246580000 0 0 97001000 89674000 0 0 1646 166 1785 9383;9384;9385;9386 7011;7012;7013;7014 7011 4 135230000 252400000 0 0 117010000 99339000 0 0 GSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPR KETVVSRWRADPWARGSYSYVAAGSSGNDY TPGPSIPGAPQPIPRLFFAGEHTIRNYPAT R G S P R L 4 1 1 2 0 2 0 5 0 3 1 0 1 0 7 5 1 0 3 1 0 0 37 0 0 11 3730.7937 LSD1-FL-His LSD1-FL-His 761 797 yes yes 4 1.1868E-61 108.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 850870000 118020000 119470000 0 0 266280000 347100000 0 0 1647 24 1786;1787 9387;9388;9389;9390;9391;9392 7015;7016;7017;7018;7019;7020 7018 40 6 118020000 122290000 0 0 321220000 384510000 0 0 GTAMNPVDHPHGGGEGR KAGAARWRGVRPTVRGTAMNPVDHPHGGGE AMNPVDHPHGGGEGRNFGKHPVTPWGVQTK R G T G R N 1 1 1 1 0 0 1 5 2 0 0 0 1 0 2 0 1 0 0 1 0 0 17 0 1 3 1687.7485 P60422 P60422 222 238 rplB 50S ribosomal protein L2 yes yes 2;3;4 2.2026E-46 177.16 By MS/MS By MS/MS By MS/MS By MS/MS 7 8 9 7 4911400000 1600200000 1372700000 0 0 991370000 947200000 0 0 1648 379 1788;1789 9393;9394;9395;9396;9397;9398;9399;9400;9401;9402;9403;9404;9405;9406;9407;9408;9409;9410;9411;9412;9413;9414;9415;9416;9417;9418;9419;9420;9421;9422;9423 7021;7022;7023;7024;7025;7026;7027;7028;7029;7030;7031;7032;7033;7034;7035;7036;7037;7038;7039;7040;7041;7042;7043;7044;7045;7046;7047;7048;7049;7050;7051 7040 301 31 1600200000 1411600000 0 0 1208200000 1056900000 0 0 GTARSMGLVVED DMTGADIEAMTRSIEGTARSMGLVVED___ SIEGTARSMGLVVED_______________ E G T E D - 1 1 0 1 0 0 1 2 0 0 1 0 1 0 0 1 1 0 0 2 0 0 12 1 1 1 1233.6023 P0A7J7 P0A7J7 131 142 rplK 50S ribosomal protein L11 yes yes 2 0.00014865 61.161 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 96177000 0 4315900 14711000 12320000 19706000 17846000 27280000 0 1649 107 1790;1791 9424;9425;9426;9427;9428;9429;9430;9431 7052;7053;7054;7055;7056;7057;7058;7059 7056 117 8 0 65818000 124990000 93405000 303390000 270480000 209950000 0 GTDVDQPR TVPLQLLAYHVALIKGTDVDQPRNLAKSVT YHVALIKGTDVDQPRNLAKSVTVE______ K G T P R N 0 1 0 2 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 8 0 0 1 886.41446 P17169 P17169 593 600 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 1.5748E-89 196.86 By MS/MS By MS/MS By MS/MS 1 1 1 1142500000 389160000 578100000 0 0 0 175270000 0 0 1650 288 1792 9432;9433;9434 7060;7061;7062;7063;7064;7065;7066;7067;7068;7069;7070;7071;7072;7073 7072 14 389160000 591740000 0 0 0 194160000 0 0 GTEITLHLR GEGEYTVADITKEDRGTEITLHLREGEDEF ITKEDRGTEITLHLREGEDEFLDDWRVRSI R G T L R E 0 1 0 0 0 0 1 1 1 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 1 0 1038.5822 P0A6Z3 P0A6Z3 173 181 htpG Chaperone protein HtpG yes yes 2 2.1618E-47 163.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 93925000 26508000 25943000 0 0 18063000 23412000 0 0 1651 88 1793 9435;9436;9437;9438 7074;7075;7076;7077;7078 7077 5 26508000 26555000 0 0 21789000 25935000 0 0 GTESAFQVHRLA GFELAAHHDLRCRWPGTESAFQVHRLADDA RWPGTESAFQVHRLADDALNGVTGLVEYHE P G T L A D 2 1 0 0 0 1 1 1 1 0 1 0 0 1 0 1 1 0 0 1 0 0 12 1 1 1 1314.668 P63417 P63417 136 147 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 2 0.00010893 66.435 By matching By MS/MS By MS/MS 1 1 1 10296000 0 0 2379300 0 5168100 2748400 0 0 1652 394 1794 9439;9440;9441 7079;7080 7080 2 0 0 20216000 0 7357700 3917900 0 0 GTFKRKPE REKPTWLEVDAGKMEGTFKRKPERSDLSAD VDAGKMEGTFKRKPERSDLSADINEHLIVE E G T P E R 0 1 0 0 0 0 1 1 0 0 0 2 0 1 1 0 1 0 0 0 0 0 8 3 0 1 961.53451 P0A7V8 P0A7V8 180 187 rpsD 30S ribosomal protein S4 yes yes 2 0.0041622 87.639 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 46743000 0 0 6168900 6516400 0 0 18660000 15398000 1653 130 1795 9442;9443;9444;9445;9446 7081;7082;7083;7084 7084 4 0 0 52416000 49404000 0 0 143610000 88365000 GTFKRKPERSDLSADINE REKPTWLEVDAGKMEGTFKRKPERSDLSAD KRKPERSDLSADINEHLIVELYSK______ E G T N E H 1 2 1 2 0 0 2 1 0 1 1 2 0 1 1 2 1 0 0 0 0 0 18 4 1 2 2062.0443 P0A7V8 P0A7V8 180 197 rpsD 30S ribosomal protein S4 yes yes 4 0.0010093 31.614 By MS/MS By MS/MS 1 1 7300600 0 0 0 0 3707400 3593200 0 0 1654 130 1796 9447;9448 7085 7085 1 0 0 0 0 57079000 54460000 0 0 GTGSGGGSSSQGPRPQLGGR FRKLSKKLGGLGGGKGTGSGGGSSSQGPRP GGSSSQGPRPQLGGRVVTIAAAAIVIIWAA K G T G R V 0 2 0 0 0 2 0 8 0 0 1 0 0 0 2 4 1 0 0 0 0 0 20 1 0 2 1798.867 P0ABC7 P0ABC7 60 79 hflK Modulator of FtsH protease HflK yes yes 3 0.00010117 47.204 By MS/MS By MS/MS By MS/MS 1 1 1 14696000 0 5915500 0 0 4524000 4256900 0 0 1655 197 1797 9449;9450;9451 7086;7087;7088 7086 3 0 6055100 0 0 5457300 4715700 0 0 GTLDLSK IVVGTPGRLLDHLKRGTLDLSKLSGLVLDE RLLDHLKRGTLDLSKLSGLVLDEADEMLRM R G T S K L 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 1 0 0 0 0 0 7 0 0 0 732.40177 P0A9P6 P0A9P6 143 149 deaD ATP-dependent RNA helicase DeaD yes yes 2 0.014077 51.787 By matching By matching By MS/MS By matching 1 1 1 1 15136000 3735300 4064400 0 0 3798600 3537400 0 0 1656 173 1798 9452;9453;9454;9455 7089 7089 1 3735300 4160400 0 0 4582200 3918600 0 0 GTLEDPNLFIR EWVELLLDQALLAERGTLEDPNLFIRRMNQ LAERGTLEDPNLFIRRMNQLLVS_______ R G T I R R 0 1 1 1 0 0 1 1 0 1 2 0 0 1 1 0 1 0 0 0 0 0 11 0 1 1 1273.6667 P0A6Z3 P0A6Z3 606 616 htpG Chaperone protein HtpG yes yes 2 6.5573E-52 169.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 173560000 49382000 44032000 0 0 39892000 40256000 0 0 1657 88 1799 9456;9457;9458;9459 7090;7091;7092;7093 7092 4 49382000 45071000 0 0 48122000 44595000 0 0 GTLIDLR ADEKPRPIDDEFQLRGTLIDLRDETLFMRQ IDDEFQLRGTLIDLRDETLFMRQPEAILRM R G T L R D 0 1 0 1 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 7 0 0 0 786.45995 P27249 P27249 358 364 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0024521 94.777 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62283000 16666000 13552000 0 0 15682000 16383000 0 0 1658 320 1800 9460;9461;9462;9463 7094;7095;7096;7097 7095 3 16666000 13872000 0 0 18917000 18149000 0 0 GTLIDLRDETLFMR ADEKPRPIDDEFQLRGTLIDLRDETLFMRQ RGTLIDLRDETLFMRQPEAILRMFYTMVHN R G T M R Q 0 2 0 2 0 0 1 1 0 1 3 0 1 1 0 0 2 0 0 0 0 0 14 1 1 0 1678.8712 P27249 P27249 358 371 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.0010153 55.841 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28521000 7712700 5777000 0 0 7656800 7374800 0 0 1659 320 1801 9464;9465;9466;9467 7098;7099;7100;7101 7098 4 7712700 5913300 0 0 9236500 8169600 0 0 GTLIKDPCNK GFFAVQQTCPHCQGRGTLIKDPCNKCHGHG HCQGRGTLIKDPCNKCHGHGRVERSKTLSV R G T N K C 0 0 1 1 1 0 0 1 0 1 1 2 0 0 1 0 1 0 0 0 0 0 10 1 0 1 1144.591 P08622 P08622 190 199 dnaJ Chaperone protein DnaJ yes yes 3 0.0066469 38.75 By MS/MS 1 0 0 0 0 0 0 0 0 0 1660 61 1802 9468 7102 7102 1 0 0 0 0 0 0 0 0 GTPTVISRPESEFTAIYR GQMPLHISLREDLDKGTPTVISRPESEFTA TVISRPESEFTAIYRQLADRVAAQLYWQGE K G T Y R Q 1 2 0 0 0 0 2 1 0 2 0 0 0 1 2 2 3 0 1 1 0 0 18 1 2 3 2023.0375 P0AF08 P0AF08 326 343 mrp Protein mrp yes yes 3 0.00036927 47.397 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 41500000 12878000 10127000 0 0 8298800 10195000 0 0 1661 241 1803 9469;9470;9471;9472;9473 7103;7104;7105;7106 7104 4 31939000 10366000 0 0 10011000 11294000 0 0 GTVAAVPPQGGRKHPQQE VSGEGVQQALLKLIEGTVAAVPPQGGRKHP AAVPPQGGRKHPQQEFLQVDTSKILFICGG E G T Q E F 2 1 0 0 0 3 1 3 1 0 0 1 0 0 3 0 1 0 0 2 0 0 18 2 0 5 1855.9653 P0A6H1 P0A6H1 217 234 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 3 0.00082978 48.547 By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 13126000 0 1843000 2315600 2680300 0 0 2395100 3891700 1662 70 1804 9474;9475;9476;9477;9478 7107;7108 7108 2 0 28106000 19675000 20321000 0 0 18433000 22334000 GVALSAGVQR DRAISYRVHQGYDHRGVALSAGVQRMVRSD GYDHRGVALSAGVQRMVRSDLASSGVMFSI R G V Q R M 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 0 2 956.54033 P23538 P23538 185 194 ppsA Phosphoenolpyruvate synthase yes yes 2 0.0035657 60.59 By matching By MS/MS By MS/MS 1 1 1 6614400 2425900 2199700 0 0 0 1988800 0 0 1663 303 1805 9479;9480;9481 7109;7110 7110 0 2425900 2251600 0 0 0 2203100 0 0 GVALVDGK EVTFEKTRRGLTRFKGVALVDGKVVCEATM RGLTRFKGVALVDGKVVCEATMMCARSREA K G V G K V 1 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 0 1 757.4334 P0A6Q6 P0A6Q6 129 136 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ yes yes 2 0.016764 48.561 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 42903000 2302100 0 7254200 9977400 2451600 2344900 7121600 11451000 1664 80 1806 9482;9483;9484;9485;9486;9487;9488 7111 7111 1 2302100 0 61638000 75645000 2957400 2597700 54810000 65716000 GVDHKVIDAFSSAG EFMAKLSAELAGENEGVDHKVIDAFSSAG_ EGVDHKVIDAFSSAG_______________ E G V A G - 2 0 0 2 0 0 0 2 1 1 0 1 0 1 0 2 0 0 0 2 0 0 14 1 0 2 1401.6888 P46144 P46144 218 231 yedJ Uncharacterized protein YedJ yes yes 2 0.0024603 49.5 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 25228000 4396500 4398100 0 3178400 0 0 5477600 7777400 1665 371 1807 9489;9490;9491;9492;9493 7112;7113;7114 7113 3 67552000 67071000 0 24097000 0 0 42157000 44633000 GVDTTDAAANAIPAAQTLAR ASEIMALAGIANGGRGVDTTDAAANAIPAA DAAANAIPAAQTLARETGAIVVVTGEMDYV R G V A R E 7 1 1 2 0 1 0 1 0 1 1 0 0 0 1 0 3 0 0 1 0 0 20 0 0 8 1925.9807 P76423 P76423 143 162 thiM Hydroxyethylthiazole kinase yes yes 2;3 8.3699E-165 259 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1806300000 469080000 416130000 0 0 428700000 492410000 0 0 1666 426 1808 9494;9495;9496;9497;9498;9499;9500;9501 7115;7116;7117;7118;7119;7120;7121;7122 7115 8 469080000 425950000 0 0 517140000 545480000 0 0 GVDVHALK HFMCYVFHQDYIVKKGVDVHALKEQMLELL QDYIVKKGVDVHALKEQMLELLQQRGAQYP K G V L K E 1 0 0 1 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 0 1 837.47085 P06149 P06149 504 511 dld D-lactate dehydrogenase yes yes 2 0.0068823 58.167 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 22387000 2439200 3052900 0 0 2053500 2791400 12050000 0 1667 50 1809 9502;9503;9504;9505;9506;9507 7123;7124;7125 7124 3 2439200 3125000 0 0 2477200 3310200 92737000 0 GVFAAGDCTTVPYK MGEIIIDAKCETNVKGVFAAGDCTTVPYKQ KGVFAAGDCTTVPYKQIIIATGEGAKASLS K G V Y K Q 2 0 0 1 1 0 0 2 0 0 0 1 0 1 1 0 2 0 1 2 0 0 14 0 0 3 1484.697 P35340 P35340 482 495 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.0398E-10 115.57 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 428600000 96325000 88551000 0 0 127390000 116330000 0 0 1668 348 1810 9508;9509;9510;9511 7126;7127;7128 7126 3 96325000 90641000 0 0 153670000 128870000 0 0 GVHEGHVAAEVIAGK FAIGDIVGQPMLAHKGVHEGHVAAEVIAGK GVHEGHVAAEVIAGKKHYFDPKVIPSIAYT K G V G K K 3 0 0 0 0 0 2 3 2 1 0 1 0 0 0 0 0 0 0 3 0 0 15 0 2 3 1472.7736 P0A9P0 P0A9P0 324 338 lpdA Dihydrolipoyl dehydrogenase yes yes 2;3 5.0278E-42 131.96 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 125450000 32844000 31564000 0 0 27331000 29422000 4292400 0 1669 172 1811 9512;9513;9514;9515;9516;9517;9518;9519;9520 7129;7130;7131;7132;7133;7134;7135 7129 7 32844000 32309000 0 0 32969000 32593000 33036000 0 GVHEGHVAAEVIAGKK FAIGDIVGQPMLAHKGVHEGHVAAEVIAGK VHEGHVAAEVIAGKKHYFDPKVIPSIAYTE K G V K K H 3 0 0 0 0 0 2 3 2 1 0 2 0 0 0 0 0 0 0 3 0 0 16 1 2 3 1600.8685 P0A9P0 P0A9P0 324 339 lpdA Dihydrolipoyl dehydrogenase yes yes 3 0.00052552 49.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26653000 9677800 12454000 0 0 2685300 1835500 0 0 1670 172 1812 9521;9522;9523;9524 7136;7137 7136 2 9677800 12748000 0 0 3239200 2033300 0 0 GVITVEDGTGLQDE VGKLIAEAMDKVGKEGVITVEDGTGLQDEL EGVITVEDGTGLQDELDVVEGMQFDRGYLS E G V D E L 0 0 0 2 0 1 2 3 0 1 1 0 0 0 0 0 2 0 0 2 0 0 14 0 1 0 1431.6729 P0A6F5 P0A6F5 173 186 groL 60 kDa chaperonin yes yes 2 1.7898E-38 148.73 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1153100000 144950000 131650000 155620000 185840000 170980000 0 161760000 202330000 1671 68 1813 9525;9526;9527;9528;9529;9530;9531 7138;7139;7140;7141 7141 4 2227200000 2007600000 1322300000 1408900000 2632300000 0 1244900000 1161100000 GVLAVMPDMDKFPYTVR SPKRREIGHGRLAKRGVLAVMPDMDKFPYT LAVMPDMDKFPYTVRVVSEITESNGSSSMA R G V V R V 1 1 0 2 0 0 0 1 0 0 1 1 2 1 2 0 1 0 1 3 0 0 17 1 0 3 1937.9743 P05055 P05055 410 426 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 0.00039541 52.026 By matching By matching By MS/MS 1 1 1 32023000 10190000 10063000 0 0 0 11770000 0 0 1672 48 1814 9532;9533;9534 7142 7142 1 10190000 10300000 0 0 0 13038000 0 0 GVLCELTNDDGTMARAP EATIDLMTLAGFKPAGVLCELTNDDGTMAR LCELTNDDGTMARAPECIEFANKHNMALVT A G V A P E 2 1 1 2 1 0 1 2 0 0 2 0 1 0 1 0 2 0 0 1 0 0 17 1 1 2 1818.824 P0A7J0 P0A7J0 170 186 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 0.02048 35.204 By MS/MS 1 3337700 0 0 0 0 0 3337700 0 0 1673 105 1815 9535 7143 7143 1 0 0 0 0 0 4757900 0 0 GVLGHEASA LPAMTLIDSVSRFIPGVLGHEASATEDSFA VSRFIPGVLGHEASATEDSFAEGLLDCPHY P G V S A T 2 0 0 0 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1 1 839.41373 P0A873 P0A873 158 166 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 0.019458 58.604 By MS/MS By MS/MS By MS/MS 1 1 1 16031000 3649800 2865000 0 0 0 9515700 0 0 1674 140 1816 9536;9537;9538 7144 7144 1 22032000 17147000 0 0 0 13565000 0 0 GVLNLQSNMPDTKPGLYEPTSPPIITDK INAENGKLCETFANKGVLNLQSNMPDTKPG PGLYEPTSPPIITDKTIVMAGSVTDNFSTR K G V D K T 0 0 2 2 0 1 1 2 0 2 3 2 1 0 5 2 3 0 1 1 0 0 28 1 1 5 3024.5478 P15877 P15877 317 344 gcd Quinoprotein glucose dehydrogenase yes yes 3 5.3063E-08 48.115 By MS/MS 1 13776000 0 0 0 0 0 13776000 0 0 1675 284 1817 9539 7145 7145 1 0 0 0 0 0 15261000 0 0 GVLQLSR PGNNLLDILGYVLNKGVLQLSRRGLELDYN ILGYVLNKGVLQLSRRGLELDYNPNTEIIP K G V S R R 0 1 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 7 0 0 0 771.46029 P15006 P15006 49 55 mcrC Protein McrC yes yes 2 0.0045137 69.383 By MS/MS By matching By MS/MS 1 1 1 5897300 0 0 0 0 2716500 3180800 0 0 1676 280 1818 9540;9541;9542 7146;7147 7146 2 0 0 0 0 3277000 3523600 0 0 GVNVLADAVK KDVKFGNDARVKMLRGVNVLADAVKVTLGP VKMLRGVNVLADAVKVTLGPKGRNVVLDKS R G V V K V 2 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 3 0 0 10 0 0 2 984.5604 P0A6F5 P0A6F5 19 28 groL 60 kDa chaperonin yes yes 2 0.00011578 97.635 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 2671800000 748180000 595190000 859430 1486200 541600000 784530000 0 0 1677 68 1819 9543;9544;9545;9546;9547;9548 7148;7149;7150;7151 7149 4 748180000 609240000 7302400 11268000 653340000 869080000 0 0 GVQLAEFYR QVIDLDVGLFQLAGRGVQLAEFYRSHKYCG FQLAGRGVQLAEFYRSHKYCGYCGHEMYPS R G V Y R S 1 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 1 1 0 0 9 0 1 1 1081.5556 P32664 P32664 85 93 nudC NADH pyrophosphatase yes yes 2 2.4641E-36 155 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 181440000 47975000 44756000 0 0 50529000 38178000 0 0 1678 340 1820 9549;9550;9551;9552 7152;7153;7154;7155 7154 4 47975000 45812000 0 0 60953000 42293000 0 0 GVQLHNEK LESPVADDTAEQFAKGVQLHNEKDLTKPAV TAEQFAKGVQLHNEKDLTKPAVLEVITPTQ K G V E K D 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 1 0 923.48248 P0AA43 P0AA43 151 158 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 0.0064933 58.917 By MS/MS By MS/MS 1 1 1949800 1478500 471360 0 0 0 0 0 0 1679 183 1821 9553;9554 7156 7156 1 1478500 482490 0 0 0 0 0 0 GVQLHNEKDLTKPAVLEVITPTQVR LESPVADDTAEQFAKGVQLHNEKDLTKPAV TKPAVLEVITPTQVRLTISEGRYHQVKRMF K G V V R L 1 1 1 1 0 2 2 1 1 1 3 2 0 0 2 0 3 0 0 4 0 0 25 2 2 3 2784.5498 P0AA43 P0AA43 151 175 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3;4;5 1.6376E-163 202.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 1848700000 578630000 487490000 0 0 386600000 395990000 0 0 1680 183 1822 9555;9556;9557;9558;9559;9560;9561;9562;9563;9564;9565;9566 7157;7158;7159;7160;7161;7162;7163;7164;7165;7166;7167;7168;7169 7166 13 578630000 498990000 0 0 466350000 438660000 0 0 GVQSVYR YGCSVITALVAQNTRGVQSVYRIEPDFVAA ALVAQNTRGVQSVYRIEPDFVAAQLDSVFS R G V Y R I 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 2 0 0 7 0 0 0 807.4239 P76422 P76422 48 54 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 5.303E-42 150.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 178470000 72722000 880300 0 0 55134000 49734000 0 0 1681 425 1823 9567;9568;9569;9570;9571 7170;7171;7172;7173 7171 4 72722000 901080 0 0 66508000 55094000 0 0 GVRPTVR HMLRVLGKAGAARWRGVRPTVRGTAMNPVD KAGAARWRGVRPTVRGTAMNPVDHPHGGGE R G V V R G 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 2 0 0 7 1 0 1 783.47152 P60422 P60422 215 221 rplB 50S ribosomal protein L2 yes yes 2 2.4748E-35 135.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 515550000 185860000 211150000 0 0 70365000 48165000 0 0 1682 379 1824 9572;9573;9574;9575 7174;7175;7176;7177;7178 7178 3 185860000 216140000 0 0 84882000 53356000 0 0 GVRYHTVRGA HSVILIRGGRVKDLPGVRYHTVRGALDCSG VKDLPGVRYHTVRGALDCSGVKDRKQARSK P G V G A L 1 2 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 1 2 0 0 10 2 0 0 1114.5996 P0A7S3 P0A7S3 92 101 rpsL 30S ribosomal protein S12 yes yes 3 0.00024589 87.298 By MS/MS By MS/MS By MS/MS 1 1 1 61392000 13687000 15664000 0 0 0 32041000 0 0 1683 122 1825 9576;9577;9578 7179;7180;7181 7181 3 82621000 93749000 0 0 0 45675000 0 0 GVSKDDAEALKKALEE EAKDLVESAPAALKEGVSKDDAEALKKALE VSKDDAEALKKALEEAGAEVEVK_______ E G V E E A 3 0 0 2 0 0 3 1 0 0 2 3 0 0 0 1 0 0 0 1 0 0 16 3 2 3 1701.8785 P0A7K2 P0A7K2 98 113 rplL 50S ribosomal protein L7/L12 yes yes 3 0.0086511 33.147 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19109000 2635800 2790500 0 0 6988100 6694600 0 0 1684 108 1826 9579;9580;9581;9582 7182;7183;7184 7184 3 40499000 42555000 0 0 107590000 101470000 0 0 GVTDAQVVSR VDARVLLPAFPDIRRGVTDAQVVSRRDTFA PDIRRGVTDAQVVSRRDTFAGHITLLFGHY R G V S R R 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 3 0 0 10 0 0 1 1030.5407 P0A6U8 P0A6U8 50 59 glgA Glycogen synthase yes yes 2 1.768E-07 94.692 By MS/MS By matching 1 1 26336000 0 0 0 0 15741000 10595000 0 0 1685 83 1827 9583;9584 7185 7185 0 0 0 0 0 18989000 11737000 0 0 GVTYCPHCDGPLFK WRNMNVPGEDQYRTKGVTYCPHCDGPLFKG KGVTYCPHCDGPLFKGKRVAVIGGGNSGVE K G V F K G 0 0 0 1 2 0 0 2 1 0 1 1 0 1 2 0 1 0 1 1 0 0 14 0 0 2 1649.733 P35340 P35340 341 354 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 2.5311E-39 145.55 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 365310000 137150000 91493000 0 0 48762000 87904000 0 0 1686 348 1828 9585;9586;9587;9588;9589;9590;9591;9592;9593;9594 7186;7187;7188;7189;7190;7191;7192 7188 7 140730000 96068000 0 0 58821000 97378000 0 0 GVTYSAPLR RLGEPVFDVQECQIRGVTYSAPLRVKLRLV QECQIRGVTYSAPLRVKLRLVIYEREAPEG R G V L R V 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 0 0 9 0 0 2 962.51853 P0A8V2 P0A8V2 89 97 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 1.4883E-05 81.191 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20126000 6067100 0 0 0 8159200 5899700 0 0 1687 154 1829 9595;9596;9597;9598 7193;7194;7195;7196 7194 4 6067100 0 0 0 9842500 6535500 0 0 GVVAGGGVALIRVASKLADLRGQNE RVEDALHATRAAVEEGVVAGGGVALIRVAS IRVASKLADLRGQNEDQNVGIKVALRAMEA E G V N E D 4 2 1 1 0 1 1 5 0 1 3 1 0 0 0 1 0 0 0 4 0 0 25 3 0 4 2449.3765 P0A6F5 P0A6F5 410 434 groL 60 kDa chaperonin yes yes 3;4 2.954E-99 166.34 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 101500000 3908700 2626800 0 0 39987000 54977000 0 0 1688 68 1830 9599;9600;9601;9602;9603;9604;9605 7197;7198;7199 7197 3 60057000 40059000 0 0 615640000 833260000 0 0 GVVLWFTGLSGSGK HPVTVQQRELHHGHRGVVLWFTGLSGSGKS RGVVLWFTGLSGSGKSTVAGALEEALHKLG R G V G K S 0 0 0 0 0 0 0 4 0 0 2 1 0 1 0 2 1 1 0 2 0 0 14 0 0 0 1406.7558 P0A6J1 P0A6J1 28 41 cysC Adenylyl-sulfate kinase yes yes 2 1.906E-42 124.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 92591000 33427000 18927000 0 0 25488000 14749000 0 0 1689 73 1831 9606;9607;9608;9609 7200;7201;7202;7203 7200 0 33427000 19374000 0 0 30746000 16338000 0 0 GVVYQGLETAPENWQHAQNR REYAFRQLVAEEKYRGVVYQGLETAPENWQ GLETAPENWQHAQNRLADWLQTLPPQTGII R G V N R L 2 1 2 0 0 3 2 2 1 0 1 0 0 0 1 0 1 1 1 2 0 0 20 0 2 3 2296.0985 P0ACI3 P0ACI3 154 173 xylR Xylose operon regulatory protein yes yes 3 1.0641E-13 89.107 By MS/MS By MS/MS By MS/MS 1 1 1 33403000 0 7504000 0 0 17207000 8692500 0 0 1690 212 1832 9610;9611;9612 7204;7205;7206 7204 3 0 7681100 0 0 20757000 9629300 0 0 GWDMATGEK SARYYKDGAEILIDRGWDMATGEKDFDDPL EILIDRGWDMATGEKDFDDPLNQQHRPRRL R G W E K D 1 0 0 1 0 0 1 2 0 0 0 1 1 0 0 0 1 1 0 0 0 0 9 0 1 1 993.42258 P0AED9 P0AED9 379 387 dcm DNA-cytosine methyltransferase yes yes 2 0.0026149 68.224 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22678000 5008800 5015300 0 0 5645800 7008100 0 0 1691 235 1833 9613;9614;9615;9616 7207;7208;7209;7210 7207 4 5008800 5133700 0 0 6810500 7763400 0 0 GWDMATGEKDFDDPLNQQHRPR SARYYKDGAEILIDRGWDMATGEKDFDDPL EKDFDDPLNQQHRPRRLTPRECARLMGFEA R G W P R R 1 2 1 4 0 2 1 2 1 0 1 1 1 1 2 0 1 1 0 0 0 0 22 2 1 3 2612.1826 P0AED9 P0AED9 379 400 dcm DNA-cytosine methyltransferase yes yes 4;5 2.818E-36 108.18 By MS/MS By MS/MS By MS/MS 1 2 1 140730000 52367000 65649000 0 0 22714000 0 0 0 1692 235 1834 9617;9618;9619;9620 7211;7212;7213;7214;7215 7213 5 52367000 67198000 0 0 27400000 0 0 0 GYDSAGLAVVDAEGHMTR VAEILLEGLRRLEYRGYDSAGLAVVDAEGH SAGLAVVDAEGHMTRLRRLGKVQMLAQAAE R G Y T R L 3 1 0 2 0 0 1 3 1 0 1 0 1 0 0 1 1 0 1 2 0 0 18 0 1 3 1847.8472 P17169 P17169 28 45 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 0 322.81 By MS/MS By MS/MS By MS/MS By MS/MS 5 4 4 4 12359000000 3333800000 2430200000 0 0 4163700000 2431800000 0 0 1693 288 1835;1836 9621;9622;9623;9624;9625;9626;9627;9628;9629;9630;9631;9632;9633;9634;9635;9636;9637 7216;7217;7218;7219;7220;7221;7222;7223;7224;7225;7226;7227;7228;7229;7230;7231;7232;7233 7233 246 16 3346200000 2487600000 0 0 5022700000 2693800000 0 0 GYEVGGTVR GQGVVQETLNMSKARGYEVGGTVRIVINNQ NMSKARGYEVGGTVRIVINNQVGFTTSNPL R G Y V R I 0 1 0 0 0 0 1 3 0 0 0 0 0 0 0 0 1 0 1 2 0 0 9 0 1 0 936.46649 P0AFG3 P0AFG3 377 385 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 6.4071E-14 133.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 150600000 38278000 46374000 0 0 31048000 34897000 0 0 1694 246 1837 9638;9639;9640;9641;9642 7234;7235;7236;7237 7234 4 38278000 47468000 0 0 37453000 38843000 0 0 GYFVFHDAYGYFEK TETQVGNELAPLKGKGYFVFHDAYGYFEKQ KGYFVFHDAYGYFEKQFGLTPLGHFTVNPE K G Y E K Q 1 0 0 1 0 0 1 2 1 0 0 1 0 3 0 0 0 0 3 1 0 0 14 0 1 1 1741.7777 P39172 P39172 202 215 znuA High-affinity zinc uptake system protein ZnuA yes yes 2;3 1.7163E-73 155.48 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 134840000 28752000 25526000 0 0 39552000 41010000 0 0 1695 361 1838 9643;9644;9645;9646;9647 7238;7239;7240;7241;7242;7243 7241 6 28752000 26129000 0 0 47711000 45430000 0 0 GYGGQDIVLPDETR DIEQVLTQAMEDKTRGYGGQDIVLPDETRR RGYGGQDIVLPDETRRAIAELVNGDARRAL R G Y T R R 0 1 0 2 0 1 1 3 0 1 1 0 0 0 1 0 1 0 1 1 0 0 14 0 1 1 1518.7314 P0AAZ4 P0AAZ4 184 197 rarA Replication-associated recombination protein A yes yes 2 5.9671E-11 120.77 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 36330000 8124400 7020700 0 0 8386000 12799000 0 0 1696 189 1839 9648;9649;9650;9651 7244;7245;7246 7246 3 8124400 7186400 0 0 10116000 14178000 0 0 GYGLQMR ANAERYRRLQTIIERGYGLQMRELDREFGE RLQTIIERGYGLQMRELDREFGELKEETCR R G Y M R E 0 1 0 0 0 1 0 2 0 0 1 0 1 0 0 0 0 0 1 0 0 0 7 0 0 0 823.40106 P0A8W8 P0A8W8 39 45 yfbU UPF0304 protein YfbU yes yes 2 0.0037548 53.522 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4512600 4512600 0 0 0 0 0 0 0 1697 155 1840 9652;9653;9654;9655 7247;7248;7249;7250 7250 4 4512600 0 0 0 0 0 0 0 GYGMGDAAEGK ETKGKATVILAHTIKGYGMGDAAEGKNIAH HTIKGYGMGDAAEGKNIAHQVKKMNMDGVR K G Y G K N 2 0 0 1 0 0 1 4 0 0 0 1 1 0 0 0 0 0 1 0 0 0 11 0 1 2 1054.439 P0AFG8 P0AFG8 394 404 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.00027411 75.378 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7923300 0 3496600 0 0 2549800 1876900 0 0 1698 248 1841 9656;9657;9658;9659 7251;7252;7253;7254 7254 4 0 3579200 0 0 3075800 2079200 0 0 GYHQRAGEPHAE NVGCVIVKDGEIVGEGYHQRAGEPHAEVHA VGEGYHQRAGEPHAEVHALRMAGEKAKGAT E G Y A E V 2 1 0 0 0 1 2 2 2 0 0 0 0 0 1 0 0 0 1 0 0 0 12 1 1 3 1350.6065 P25539 P25539 41 52 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 3 0.00078514 60.255 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 150680000 7726900 8913300 19902000 31404000 3993200 5848900 36975000 35920000 1699 315 1842 9660;9661;9662;9663;9664;9665;9666;9667 7255;7256;7257;7258;7259 7257 4 118720000 135930000 169100000 238090000 61478000 88649000 284570000 206140000 GYIARQQDE DEQAAEQVEIQVKYEGYIARQQDEIEKQLR IQVKYEGYIARQQDEIEKQLRNENTLLPAT E G Y D E I 1 1 0 1 0 2 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 9 1 0 1 1078.5043 P0A6U3 P0A6U3 550 558 mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG yes yes 2 8.4019E-06 86.794 By MS/MS 1 0 0 0 0 0 0 0 0 0 1700 82 1843 9668 7260 7260 1 0 0 0 0 0 0 0 0 GYLADVELSK MSVAQQSLVLFAAERGYLADVELSKIGSFE FAAERGYLADVELSKIGSFEAALLAYVDRD R G Y S K I 1 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 10 0 1 1 1093.5655 P0ABB0 P0ABB0 454 463 atpA ATP synthase subunit alpha yes yes 2 0.0025593 64.04 By matching By matching By MS/MS By MS/MS 1 1 1 1 22220000 3443400 4397800 0 0 5626300 8752500 0 0 1701 193 1844 9669;9670;9671;9672 7261;7262 7262 2 3443400 4501600 0 0 6787000 9695800 0 0 GYLRASE VDAKGATVELADGVEGYLRASEASRDRVED VELADGVEGYLRASEASRDRVEDATLVLSV E G Y S E A 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 7 1 0 1 794.39227 P0AG67 P0AG67 476 482 rpsA 30S ribosomal protein S1 yes yes 2 0.019855 59.641 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 1635800000 3895400 3874200 768340000 813320000 1241600 1866900 23061000 20237000 1702 261 1845 9673;9674;9675;9676;9677;9678;9679;9680;9681 7263;7264 7263 2 57851000 59081000 6528400000 6166300000 19116000 28296000 177480000 116130000 GYLSPYFINKPETGAVELESPFILLADKK LQDELDVVEGMQFDRGYLSPYFINKPETGA AVELESPFILLADKKISNIREMLPVLEAVA R G Y K K I 2 0 1 1 0 0 3 2 0 2 4 3 0 2 3 2 1 0 2 1 0 0 29 2 3 5 3238.7166 P0A6F5 P0A6F5 198 226 groL 60 kDa chaperonin yes yes 3;4 6.7144E-37 106.04 By matching By matching By MS/MS By MS/MS 1 1 2 2 629000000 35960000 22191000 0 0 302000000 268850000 0 0 1703 68 1846 9682;9683;9684;9685;9686;9687 7265;7266 7266 2 35960000 22715000 0 0 364300000 297820000 0 0 GYNIESLTVAPTDDPTLSR ESGALSRVIGLFSQRGYNIESLTVAPTDDP ESLTVAPTDDPTLSRMTIQTVGDEKVLEQI R G Y S R M 1 1 1 2 0 0 1 1 0 1 2 0 0 0 2 2 3 0 1 1 0 0 19 0 1 3 2048.0062 P00894 P00894 27 45 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 3.5747E-63 154.1 By MS/MS By MS/MS By MS/MS 1 1 1 48099000 15691000 18394000 0 0 0 14014000 0 0 1704 30 1847 9688;9689;9690 7267;7268;7269 7268 3 15691000 18828000 0 0 0 15524000 0 0 GYQDVEHR FAGFRVVESSSYYGKGYQDVEHRKPSIRNA SSSYYGKGYQDVEHRKPSIRNAHRCLDWEP K G Y H R K 0 1 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 8 0 1 0 1002.4519 P77398 P77398 612 619 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 1.4222E-58 178.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 5057400000 1498100000 1690600000 0 0 784770000 1083900000 0 0 1705 432 1848 9691;9692;9693;9694;9695 7270;7271;7272;7273;7274;7275;7276 7271 7 1498100000 1730500000 0 0 946660000 1200700000 0 0 GYQDVEHRK FAGFRVVESSSYYGKGYQDVEHRKPSIRNA SSYYGKGYQDVEHRKPSIRNAHRCLDWEPK K G Y R K P 0 1 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 0 1 1 0 0 9 1 1 0 1130.5469 P77398 P77398 612 620 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.018832 20.87 By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 8235000 1937100 1792600 0 2028000 1430300 1047100 0 0 1706 432 1849 9696;9697;9698;9699;9700 7277 7277 1 1937100 1834900 0 15375000 1725300 1159900 0 0 GYQDVEHRKPSIR FAGFRVVESSSYYGKGYQDVEHRKPSIRNA GKGYQDVEHRKPSIRNAHRCLDWEPKIDMQ K G Y I R N 0 2 0 1 0 1 1 1 1 1 0 1 0 0 1 1 0 0 1 1 0 0 13 2 1 1 1583.8168 P77398 P77398 612 624 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4 9.0351E-12 72.089 By MS/MS By MS/MS By matching By matching 2 2 1 1 17549000 8178600 7074900 0 0 1089800 1205300 0 0 1707 432 1850 9701;9702;9703;9704;9705;9706 7278;7279;7280;7281 7281 4 8178600 7241900 0 0 1314600 1335200 0 0 GYRPQFYFR ILSKDEGGRHTPFFKGYRPQFYFRTTDVTG HTPFFKGYRPQFYFRTTDVTGTIELPEGVE K G Y F R T 0 2 0 0 0 1 0 1 0 0 0 0 0 2 1 0 0 0 2 0 0 0 9 1 0 1 1232.6091 P0CE48;P0CE47 P0CE48 326 334 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3 1.2147E-27 149.65 By MS/MS By MS/MS 1 1 62979000 0 0 0 0 26201000 36778000 0 0 1708 269 1851 9707;9708 7282;7283 7282 2 0 0 0 0 31607000 40742000 0 0 GYSFDDEEHALGLR SPVHLKEDLAQTRKRGYSFDDEEHALGLRC RGYSFDDEEHALGLRCLAACIFDEHREPFA R G Y L R C 1 1 0 2 0 0 2 2 1 0 2 0 0 1 0 1 0 0 1 0 0 0 14 0 2 1 1607.7216 P16528 P16528 208 221 iclR Acetate operon repressor yes yes 2;3 1.1685E-125 223.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 493120000 133280000 118390000 0 0 114660000 126800000 0 0 1709 285 1852 9709;9710;9711;9712;9713;9714;9715;9716 7284;7285;7286;7287;7288;7289;7290;7291 7291 8 133280000 121180000 0 0 138310000 140460000 0 0 GYSPTHREEEYGK GGKRHESSSEKKERKGYSPTHREEEYGKNH RKGYSPTHREEEYGKNHHNSSKKEKNKTEN K G Y G K N 0 1 0 0 0 0 3 2 1 0 0 1 0 0 1 1 1 0 2 0 0 0 13 1 3 1 1551.6954 CON__P20930 CON__P20930 163 175 yes yes 3 0.0052549 41.052 By MS/MS By MS/MS 1 1 2395100 0 0 0 0 1547100 848030 0 0 + 1710 14 1853 9717;9718 7292;7293 7292 2 0 0 0 0 1866300 939420 0 0 GYVNLLPVQHKRSRDPGDSAE SYICPQRHQFDMAKEGYVNLLPVQHKRSRD PVQHKRSRDPGDSAEMMQARRAFLDAGHYQ E G Y A E M 1 2 1 2 0 1 1 2 1 0 2 1 0 0 2 2 0 0 1 2 0 0 21 3 0 3 2337.1826 P36999 P36999 33 53 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 3;4;5 2.9331E-17 80.07 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 2 2 3 3 1068900000 22259000 18065000 225180000 271860000 10812000 12594000 214590000 293520000 1711 352 1854 9719;9720;9721;9722;9723;9724;9725;9726;9727;9728;9729;9730;9731;9732;9733;9734;9735;9736;9737;9738 7294;7295;7296;7297;7298;7299;7300;7301;7302;7303;7304;7305;7306;7307;7308;7309;7310 7297 17 342000000 275500000 1913300000 2061100000 166460000 190880000 1651500000 1684500000 GYVPASTR ENASISMRIKVQRGRGYVPASTRIHSEEDE IKVQRGRGYVPASTRIHSEEDERPIGRLLV R G Y T R I 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 1 1 0 0 8 0 0 2 849.43447 P0A7Z4 P0A7Z4 151 158 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 0.0073421 57.281 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 23525000 5397200 6432100 918240 0 4472600 4307000 831060 1167100 1712 135 1855 9739;9740;9741;9742;9743;9744;9745 7311;7312;7313 7312 3 5397200 6583900 7802100 0 5395300 4771100 6396100 6697900 GYYTHAFADALPE LDDKATAVLDIGCGEGYYTHAFADALPEIT GEGYYTHAFADALPEITTFGLDVSKVAIKA E G Y P E I 3 0 0 1 0 0 1 1 1 0 1 0 0 1 1 0 1 0 2 0 0 0 13 0 0 4 1453.6514 P36999 P36999 97 109 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 1.5388E-09 85.731 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 237460000 14798000 14634000 41285000 38789000 17066000 12951000 43832000 54109000 1713 352 1856 9746;9747;9748;9749;9750;9751;9752;9753 7314;7315;7316;7317 7316 4 227370000 223180000 350790000 294080000 262750000 196290000 337340000 310520000 HAFATHLLNHGADLR LAGIDSEKLSPHVLRHAFATHLLNHGADLR HAFATHLLNHGADLRVVQMLLGHSDLSTTQ R H A L R V 3 1 1 1 0 0 0 1 3 0 3 0 0 1 0 0 1 0 0 0 0 0 15 0 0 3 1671.8594 P0A8P8 P0A8P8 248 262 xerD Tyrosine recombinase XerD yes yes 2;3;4 1.2225E-146 212.24 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 1 637680000 180960000 160370000 0 0 161490000 134860000 0 0 1714 151 1857 9754;9755;9756;9757;9758;9759;9760;9761;9762 7318;7319;7320;7321;7322;7323;7324;7325;7326;7327 7318 10 180960000 164160000 0 0 194800000 149390000 0 0 HAGGVVIAPTK DMARKLEGVTRNAGKHAGGVVIAPTKITDF NAGKHAGGVVIAPTKITDFAPLYCDEEGKH K H A T K I 2 0 0 0 0 0 0 2 1 1 0 1 0 0 1 0 1 0 0 2 0 0 11 0 0 3 1048.6029 P10443 P10443 511 521 dnaE DNA polymerase III subunit alpha yes yes 2 0.0011477 67.897 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 10998000 2259300 3158700 0 0 3192200 2387300 0 0 1715 273 1858 9763;9764;9765;9766 7328;7329;7330 7328 3 2259300 3233300 0 0 3850700 2644600 0 0 HAHLTHQYP LAILTTSLVTPSVWAHAHLTHQYPAANAQV TPSVWAHAHLTHQYPAANAQVTAAPQAITL A H A Y P A 1 0 0 0 0 1 0 0 3 0 1 0 0 0 1 0 1 0 1 0 0 0 9 0 0 1 1102.5308 P0AA57 P0AA57 27 35 yobA Protein YobA yes yes 3 0.00049897 66.073 By MS/MS By MS/MS By MS/MS 1 2 1 271860000 77583000 70684000 0 0 0 123600000 0 0 1716 184 1859 9767;9768;9769;9770 7331;7332;7333;7334 7334 3 468330000 423040000 0 0 0 176190000 0 0 HAISTVVPSR FVILLKNTVSQMVYKHAISTVVPSRPVSHH QMVYKHAISTVVPSRPVSHHSNNAGGGTSS K H A S R P 1 1 0 0 0 0 0 0 1 1 0 0 0 0 1 2 1 0 0 2 0 0 10 0 0 2 1065.5931 P0A6X3 P0A6X3 57 66 hfq RNA-binding protein Hfq yes yes 2 1.9383E-15 134.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30039000 8250600 9221300 0 0 5681400 6885700 0 0 1717 84 1860 9771;9772;9773;9774 7335;7336;7337;7338 7336 4 8250600 9439000 0 0 6853400 7627800 0 0 HALHLFHQHSP ______________________________ AQSAHALHLFHQHSPLVHCMTNDVVQTFTA A H A S P L 1 0 0 0 0 1 0 0 4 0 2 0 0 1 1 1 0 0 0 0 0 0 11 0 0 1 1322.6632 P76423 P76423 13 23 thiM Hydroxyethylthiazole kinase yes yes 3 0.022941 43.635 By MS/MS 1 3700700 0 0 0 0 3700700 0 0 0 1718 426 1861 9775 7339 7339 1 0 0 0 0 5268600 0 0 0 HANLPVLVVR ISTHLLGSNASSVIRHANLPVLVVR_____ SSVIRHANLPVLVVR_______________ R H A V R - 1 1 1 0 0 0 0 0 1 0 2 0 0 0 1 0 0 0 0 3 0 0 10 0 0 2 1116.6768 P39177 P39177 133 142 uspG Universal stress protein G yes yes 2 0.0003064 89.752 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29026000 10237000 8991400 0 0 4355200 5442600 0 0 1719 362 1862 9776;9777;9778;9779 7340;7341;7342;7343 7340 4 10237000 9203700 0 0 5253600 6029200 0 0 HAPGDYTPTVKPSSK ALPELVDQVVEVVQRHAPGDYTPTVKPSSK HAPGDYTPTVKPSSKGNYHSVSITINATHI R H A S K G 1 0 0 1 0 0 0 1 1 0 0 2 0 0 3 2 2 0 1 1 0 0 15 1 0 4 1583.7944 P0A8J4 P0A8J4 38 52 ybeD UPF0250 protein YbeD yes yes 3 3.3918E-06 71.529 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22596000 6018100 7950900 0 0 3920200 4707100 0 0 1720 145 1863 9780;9781;9782;9783 7344;7345;7346;7347 7345 4 6018100 8138600 0 0 4729000 5214400 0 0 HASDDEPFSALAFK INGILDDGKDTPAERHASDDEPFSALAFKI RHASDDEPFSALAFKIATDPFVGNLTFFRV R H A F K I 3 0 0 2 0 0 1 0 1 0 1 1 0 2 1 2 0 0 0 0 0 0 14 0 1 4 1533.71 P0A6M8 P0A6M8 310 323 fusA Elongation factor G yes yes 2;3 8.7736E-14 106.62 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 38798000 10330000 5850700 0 0 9445200 13172000 0 0 1721 76 1864 9784;9785;9786;9787;9788;9789;9790;9791 7348;7349;7350;7351;7352;7353;7354;7355;7356 7351 9 10330000 5988800 0 0 11394000 14591000 0 0 HAVEFVASNAR HVEDTLIAGAGICDRHAVEFVASNARSCVQ ICDRHAVEFVASNARSCVQWLIDQGVLFDT R H A A R S 3 1 1 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1 3 1199.6047 P10902 P10902 81 91 nadB L-aspartate oxidase yes yes 2;3 2.9904E-23 157.96 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 184340000 47288000 46184000 0 0 43422000 47449000 0 0 1722 274 1865 9792;9793;9794;9795;9796;9797;9798;9799 7357;7358;7359;7360;7361;7362 7359 6 47288000 47275000 0 0 52381000 52563000 0 0 HAVIALTSIYGVGK ______________________________ KHAVIALTSIYGVGKTRSKAILAAAGIAED K H A G K T 2 0 0 0 0 0 0 2 1 2 1 1 0 0 0 1 1 0 1 2 0 0 14 0 0 2 1427.8136 P0A7S9 P0A7S9 14 27 rpsM 30S ribosomal protein S13 yes yes 2;3 1.4587E-107 192.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 212920000 58921000 40256000 0 0 57656000 56091000 0 0 1723 123 1866 9800;9801;9802;9803;9804;9805;9806;9807 7363;7364;7365;7366;7367;7368;7369;7370 7369 8 58921000 41207000 0 0 69551000 62136000 0 0 HAVTEASPMVK RFNDAVIRSMVMRTKHAVTEASPMVKAKDE MRTKHAVTEASPMVKAKDERRERRDDFANE K H A V K A 2 0 0 0 0 0 1 0 1 0 0 1 1 0 1 1 1 0 0 2 0 0 11 0 1 3 1168.591 P02358 P02358 94 104 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 2 8.4272E-133 209.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44320000 11354000 15256000 0 0 9448800 8260500 0 0 1724 35 1867 9808;9809;9810;9811 7371;7372;7373;7374 7372 4 11354000 15617000 0 0 11398000 9150800 0 0 HDAVLEAGGLHIIGTER TAEQIEKIKADWQVRHDAVLEAGGLHIIGT AVLEAGGLHIIGTERHESRRIDNQLRGRSG R H D E R H 2 1 0 1 0 0 2 3 2 2 2 0 0 0 0 0 1 0 0 1 0 0 17 0 2 2 1786.9326 P10408 P10408 545 561 secA Protein translocase subunit SecA yes yes 3 7.4565E-07 65.949 By matching By matching By MS/MS 1 1 1 20130000 7964300 3672300 0 0 0 8493500 0 0 1725 272 1868 9812;9813;9814 7375 7375 0 7964300 3759000 0 0 0 9408900 0 0 HDAVLIEAMESR VDFPAEVIHAWQTLKHDAVLIEAMESRSLR TLKHDAVLIEAMESRSLR____________ K H D S R S 2 1 0 1 0 0 2 0 1 1 1 0 1 0 0 1 0 0 0 1 0 0 12 0 2 2 1369.666 P34209 P34209 252 263 ydcF Protein YdcF yes yes 3 4.0803E-07 71.176 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34719000 11701000 9207500 0 0 6444700 7365200 0 0 1726 347 1869 9815;9816;9817;9818 7376;7377;7378;7379 7377 4 11701000 9424800 0 0 7774300 8159000 0 0 HDDAYTPDNVAGK MDSMINRYTADRRLRHDDAYTPDNVAGKRP LRHDDAYTPDNVAGKRPDRATLVYTQRCKE R H D G K R 2 0 1 3 0 0 0 1 1 0 0 1 0 0 1 0 1 0 1 1 0 0 13 0 0 3 1401.6161 Q46861 Q46861 123 135 ygiQ UPF0313 protein YgiQ yes yes 2 2.7838E-20 134.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27678000 7903600 5390500 0 0 7534300 6849400 0 0 1727 441 1870 9819;9820;9821;9822 7380;7381;7382;7383 7382 4 7903600 5517700 0 0 9088600 7587700 0 0 HDIVHGLQALPSRIE VAKLSRLKGLDASIEHDIVHGLQALPSRIE HDIVHGLQALPSRIEQMLSQDKRIEALAED E H D I E Q 1 1 0 1 0 1 1 1 2 2 2 0 0 0 1 1 0 0 0 1 0 0 15 1 0 2 1683.9057 P17169 P17169 432 446 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3;4 7.0852E-17 122.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 3 3 3 2 3 360960000 24831000 22126000 44458000 57060000 73943000 54751000 24956000 58835000 1728 288 1871 9823;9824;9825;9826;9827;9828;9829;9830;9831;9832;9833;9834;9835;9836;9837;9838;9839;9840;9841;9842 7384;7385;7386;7387;7388;7389;7390;7391;7392;7393;7394;7395;7396;7397;7398 7388 15 381530000 337430000 377750000 432600000 1138400000 829830000 192070000 337640000 HDLAVEPPAPTVLQK FIGDKAGNFQRTGNRHDLAVEPPAPTVLQK HDLAVEPPAPTVLQKLVDEKHGQVVSVGKI R H D Q K L 2 0 0 1 0 1 1 0 1 0 2 1 0 0 3 0 1 0 0 2 0 0 15 0 1 5 1613.8777 P0A6K6 P0A6K6 231 245 deoB Phosphopentomutase yes yes 2;3 7.875E-19 155.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 97563000 21349000 14099000 0 0 23612000 38503000 0 0 1729 75 1872 9843;9844;9845;9846;9847;9848;9849 7399;7400;7401;7402;7403;7404 7404 6 21349000 14432000 0 0 28483000 42653000 0 0 HDMQHLLK DPDVRLISYSTRHPKHDMQHLLKEVDKMLQ YSTRHPKHDMQHLLKEVDKMLQLNVDERPL K H D L K E 0 0 0 1 0 1 0 0 2 0 2 1 1 0 0 0 0 0 0 0 0 0 8 0 0 0 1020.5175 P0A8E1 P0A8E1 41 48 ycfP UPF0227 protein YcfP yes yes 2 8.8176E-35 159.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 254340000 56382000 80136000 0 0 45684000 72135000 0 0 1730 143 1873;1874 9850;9851;9852;9853;9854;9855;9856 7405;7406;7407;7408;7409;7410 7406 135 6 56382000 82028000 0 0 55108000 79910000 0 0 HDQLLMLIAER ______________________________ GNPRHDQLLMLIAERGYMNIDELANLLDVS R H D E R G 1 1 0 1 0 1 1 0 1 1 3 0 1 0 0 0 0 0 0 0 0 0 11 0 1 1 1337.7126 P32144 P32144 12 22 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 1.9193E-07 124.42 By MS/MS By MS/MS By MS/MS 1 1 1 25869000 7886300 9574400 0 0 0 8408600 0 0 1731 339 1875 9857;9858;9859 7411;7412;7413 7412 3 7886300 9800400 0 0 0 9314900 0 0 HDRMTSQEAA EPSGVEGAAFQSRLPHDRMTSQEAACFPDI QSRLPHDRMTSQEAACFPDIISGPQQTQKV P H D A A C 2 1 0 1 0 1 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 10 1 1 1 1144.4931 LSD1-FL-His LSD1-FL-His 187 196 yes yes 2 0.015908 41.448 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 13076000 2438900 4824200 0 0 661010 5151500 0 0 1732 24 1876 9860;9861;9862;9863 7414 7414 0 14722000 28873000 0 0 941070 7343400 0 0 HDWFVER ELINTPEMLNGVKQRHDWFVERLNTINHRY MLNGVKQRHDWFVERLNTINHRYGLFSEVR R H D E R L 0 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 7 0 1 0 987.45626 P77581 P77581 312 318 astC Succinylornithine transaminase yes yes 2 4.7636E-45 166.05 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 119140000 27147000 36418000 0 0 23454000 32123000 0 0 1733 437 1877 9864;9865;9866;9867 7415;7416;7417;7418 7417 4 27147000 37278000 0 0 28293000 35585000 0 0 HEAWITLEK DGFGETLLSREKAKRHEAWITLEKAYEDAE REKAKRHEAWITLEKAYEDAETVTGVINGK R H E E K A 1 0 0 0 0 0 2 0 1 1 1 1 0 0 0 0 1 1 0 0 0 0 9 0 2 1 1125.5819 P0AG67 P0AG67 92 100 rpsA 30S ribosomal protein S1 yes yes 2 4.1159E-05 82.452 By MS/MS 1 0 0 0 0 0 0 0 0 0 1734 261 1878 9868 7419 7419 1 0 0 0 0 0 0 0 0 HEDFPYQEILLTR SFTPIEQMLKFRASRHEDFPYQEILLTRLC SRHEDFPYQEILLTRLCMHMQSKLLENRNK R H E T R L 0 1 0 1 0 1 2 0 1 1 2 0 0 1 1 0 1 0 1 0 0 0 13 0 2 1 1659.8257 P0ACR9 P0ACR9 19 31 mprA Transcriptional repressor MprA yes yes 2 4.776E-07 82.749 By MS/MS By MS/MS By MS/MS 1 1 1 7782200 2626500 2702900 0 0 2452800 0 0 0 1735 219 1879 9869;9870;9871 7420;7421;7422 7422 3 2626500 2766700 0 0 2958800 0 0 0 HEGSTGFIP PLNLPNLTRLGLAKAHEGSTGFIPAGMDGN LGLAKAHEGSTGFIPAGMDGNAEVIGAYAW A H E I P A 0 0 0 0 0 0 1 2 1 1 0 0 0 1 1 1 1 0 0 0 0 0 9 0 1 0 943.43995 P0A6K6 P0A6K6 65 73 deoB Phosphopentomutase yes yes 2 0.020245 59.205 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10463000 862580 1006400 0 0 2092700 6501500 0 0 1736 75 1880 9872;9873;9874;9875 7423 7423 1 5207000 6023200 0 0 2979300 9267800 0 0 HELFIAEWR KVPIVSKLENDTAARHELFIAEWRKQCSEK NDTAARHELFIAEWRKQCSEKKAQAKGWRQ R H E W R K 1 1 0 0 0 0 2 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 9 0 2 1 1199.6087 P15038 P15038 304 312 helD Helicase IV yes yes 2 2.592E-13 143.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57397000 18766000 14631000 0 0 11147000 12853000 0 0 1737 281 1881 9876;9877;9878;9879 7424;7425;7426;7427 7427 4 18766000 14976000 0 0 13446000 14238000 0 0 HELNIVQNNEFVDHR DQKGLIARITNICYKHELNIVQNNEFVDHR HELNIVQNNEFVDHRTGRFFMRTELEGIFN K H E H R T 0 1 3 1 0 1 2 0 2 1 1 0 0 1 0 0 0 0 0 2 0 0 15 0 2 0 1862.9024 P37051 P37051 30 44 purU Formyltetrahydrofolate deformylase yes yes 3 2.7818E-168 222.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 165100000 45736000 37693000 0 0 37540000 44129000 0 0 1738 354 1882 9880;9881;9882;9883 7428;7429;7430;7431 7431 4 45736000 38582000 0 0 45284000 48885000 0 0 HEQAAVHMADGLAR DALHTVGGIDHVLVRHEQAAVHMADGLARA RHEQAAVHMADGLARATGEVGVVLVTSGPG R H E A R A 4 1 0 1 0 1 1 1 2 0 1 0 1 0 0 0 0 0 0 1 0 0 14 0 1 4 1504.7205 P00893 P00893 50 63 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2;3 5.8412E-40 127.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 327820000 89667000 100850000 0 0 64220000 73082000 0 0 1739 29 1883;1884 9884;9885;9886;9887;9888;9889;9890;9891 7432;7433;7434;7435;7436;7437;7438;7439 7438 62 8 89667000 103230000 0 0 77469000 80959000 0 0 HETISEDELR DVAAGLVCVGSTLTRHETISEDELRQRLSR STLTRHETISEDELRQRLSRMGTIDLRVDY R H E L R Q 0 1 0 1 0 0 3 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 3 0 1227.5731 P0ADP2 P0ADP2 84 93 yigI Uncharacterized protein YigI yes yes 2 1.4933E-37 155.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 38333000 10004000 9536100 0 0 9130200 9661800 0 0 1740 224 1885 9892;9893;9894;9895;9896;9897 7440;7441;7442;7443 7440 4 17640000 9761200 0 0 11014000 11171000 0 0 HFCHELLSFK WTLDPVAVGALDYRRHFCHELLSFKPAAIR LDYRRHFCHELLSFKPAAIRGNASEIMALA R H F F K P 0 0 0 0 1 0 1 0 2 0 2 1 0 2 0 1 0 0 0 0 0 0 10 0 1 0 1316.6336 P76423 P76423 111 120 thiM Hydroxyethylthiazole kinase yes yes 3 0.00012405 85.807 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57273000 16731000 9674500 0 0 11440000 19428000 0 0 1741 426 1886 9898;9899;9900;9901 7444;7445;7446;7447 7447 4 16731000 9902900 0 0 13800000 21522000 0 0 HFCHELLSFKPAAIR WTLDPVAVGALDYRRHFCHELLSFKPAAIR HFCHELLSFKPAAIRGNASEIMALAGIANG R H F I R G 2 1 0 0 1 0 1 0 2 1 2 1 0 2 1 1 0 0 0 0 0 0 15 1 1 3 1824.9457 P76423 P76423 111 125 thiM Hydroxyethylthiazole kinase yes yes 3;4 7.4253E-64 167.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 374850000 69624000 86612000 0 0 107340000 111280000 0 0 1742 426 1887 9902;9903;9904;9905;9906;9907;9908;9909;9910 7448;7449;7450;7451;7452;7453;7454;7455 7455 7 69624000 88656000 0 0 150220000 123270000 0 0 HFEQFIESGCAK KGSYSHLAARQYAARHFEQFIESGCAKFAD AARHFEQFIESGCAKFADIFNQVETGQADY R H F A K F 1 0 0 0 1 1 2 1 1 1 0 1 0 2 0 1 0 0 0 0 0 0 12 0 2 1 1451.6503 P0A9J8 P0A9J8 127 138 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 7.885E-235 248.05 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 224030000 58157000 59306000 0 0 48686000 57880000 0 0 1743 166 1888 9911;9912;9913;9914;9915;9916;9917;9918 7456;7457;7458;7459;7460;7461;7462;7463 7462 8 58157000 60705000 0 0 58730000 64118000 0 0 HFITQHLPTD SGKPLDKTRANSLTRHFITQHLPTD_____ NSLTRHFITQHLPTD_______________ R H F T D - 0 0 0 1 0 1 0 0 2 1 1 0 0 1 1 0 2 0 0 0 0 0 10 0 0 1 1207.5986 P17446 P17446 186 195 betI HTH-type transcriptional regulator BetI yes yes 2 0.0031593 45.68 By MS/MS 1 0 0 0 0 0 0 0 0 0 1744 289 1889 9919 7464 7464 1 0 0 0 0 0 0 0 0 HFLPQHR AEDNGPDDPKIIDGKHFLPQHRERIVLVGF DPKIIDGKHFLPQHRERIVLVGFRRDLNLK K H F H R E 0 1 0 0 0 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 0 7 0 0 1 933.49332 P0AED9 P0AED9 270 276 dcm DNA-cytosine methyltransferase yes yes 2 3.1039E-11 130.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 53240000 23523000 14316000 0 0 6550100 8850700 0 0 1745 235 1890 9920;9921;9922;9923 7465;7466;7467;7468 7465 4 23523000 14654000 0 0 7901500 9804600 0 0 HFMNASGGGVTASGGEAILQAEFVR EVTVEDLMKEVVTYRHFMNASGGGVTASGG TASGGEAILQAEFVRDWFRACKKEGIHTCL R H F V R D 4 1 1 0 0 1 2 5 1 1 1 0 1 2 0 2 1 0 0 2 0 0 25 0 2 4 2505.2071 P0A9N4 P0A9N4 65 89 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3 1.2376E-50 119.52 By MS/MS By MS/MS By MS/MS 1 1 1 36381000 0 5102600 0 0 17363000 13915000 0 0 1746 171 1891 9924;9925;9926 7469;7470;7471 7470 3 0 5223000 0 0 20945000 15415000 0 0 HFNAEHQHTR LVNRMKQTIRARRKRHFNAEHQHTRKKSID ARRKRHFNAEHQHTRKKSIDLEFIVWQRLA R H F T R K 1 1 1 0 0 1 1 0 3 0 0 0 0 1 0 0 1 0 0 0 0 0 10 0 1 1 1275.5857 P0A8N0 P0A8N0 81 90 matP Macrodomain Ter protein yes yes 3 0.0087199 43.282 By MS/MS By matching 1 1 3262100 1386200 1875900 0 0 0 0 0 0 1747 149 1892 9927;9928 7472 7472 0 1386200 1920200 0 0 0 0 0 0 HFQTAVK RGGEAFHTGCIPFYKHFQTAVKSCSQGGVR TGCIPFYKHFQTAVKSCSQGGVRGGAATLF K H F V K S 1 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 1 0 0 7 0 0 1 829.44464 P00452;P00452-2 P00452 284 290 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 2.537E-07 123.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22830000 7514000 8208700 0 0 3440700 3666500 0 0 1748 26 1893 9929;9930;9931;9932 7473;7474;7475;7476 7474 4 7514000 8402400 0 0 4150600 4061700 0 0 HFSVSPQTIRRDLNE LVKQQGYVSTEELVEHFSVSPQTIRRDLNE HFSVSPQTIRRDLNELAEQNLILRHHGGAA E H F N E L 0 2 1 1 0 1 1 0 1 1 1 0 0 1 1 2 1 0 0 1 0 0 15 2 0 1 1797.9122 P0ACL0 P0ACL0 28 42 glpR Glycerol-3-phosphate regulon repressor yes yes 3 0.00062879 53.491 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 690950000 72282000 71443000 1934100 224400000 62431000 56835000 201620000 0 1749 215 1894 9933;9934;9935;9936;9937;9938;9939 7477;7478;7479;7480;7481 7478 5 1110600000 1089500000 16434000 1701300000 961180000 861410000 1551700000 0 HFSVSPQTIRRDLNELAE LVKQQGYVSTEELVEHFSVSPQTIRRDLNE VSPQTIRRDLNELAEQNLILRHHGGAALPS E H F A E Q 1 2 1 1 0 1 2 0 1 1 2 0 0 1 1 2 1 0 0 1 0 0 18 2 1 2 2111.076 P0ACL0 P0ACL0 28 45 glpR Glycerol-3-phosphate regulon repressor yes yes 3 0.008978 24.538 By MS/MS By MS/MS 1 1 6928700 0 0 0 0 4308000 2620700 0 0 1750 215 1895 9940;9941 7482 7482 1 0 0 0 0 66326000 39721000 0 0 HFTVETEVTFLPTHTDRK SWQPPQPRRQPAKLRHFTVETEVTFLPTHT VETEVTFLPTHTDRKSFLELIALDQPGLLA R H F R K S 0 1 0 1 0 0 2 0 2 0 1 1 0 2 1 0 5 0 0 2 0 0 18 1 2 1 2157.0855 P27249 P27249 797 814 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 4 4.9723E-13 89.311 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 80501000 22571000 24744000 0 0 10811000 22374000 0 0 1751 320 1896 9942;9943;9944;9945 7483;7484;7485;7486 7486 4 22571000 25328000 0 0 13042000 24785000 0 0 HFVLVDAGFNDLMR VLITQVRSVKQMGSRHFVLVDAGFNDLMRP RHFVLVDAGFNDLMRPAMYGSYHHISALAA R H F M R P 1 1 1 2 0 0 0 1 1 0 2 0 1 2 0 0 0 0 0 2 0 0 14 0 0 1 1632.8082 P00861 P00861 294 307 lysA Diaminopimelate decarboxylase yes yes 3 0.0016866 48.532 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 13326000 3302000 2649800 0 0 3849900 3524400 0 0 1752 28 1897 9946;9947;9948;9949 7487;7488 7487 2 3302000 2712400 0 0 4644200 3904300 0 0 HGANHLAEQLNK GKGNWQQVLVFTRTKHGANHLAEQLNKDGI RTKHGANHLAEQLNKDGIRSAAIHGNKSQG K H G N K D 2 0 2 0 0 1 1 1 2 0 2 1 0 0 0 0 0 0 0 0 0 0 12 0 1 2 1330.6742 P25888 P25888 256 267 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 2.8998E-139 227.94 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 582410000 214840000 166990000 0 0 103570000 97006000 0 0 1753 318 1898 9950;9951;9952;9953;9954;9955;9956;9957 7489;7490;7491;7492;7493;7494;7495;7496;7497;7498 7497 9 214840000 170930000 0 0 124940000 107460000 0 0 HGAVSVMQYR VSMINGDDGKKLSKRHGAVSVMQYRDDGYL KLSKRHGAVSVMQYRDDGYLPEALLNYLVR R H G Y R D 1 1 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 1 2 0 0 10 0 0 1 1146.5604 P04805 P04805 242 251 gltX Glutamate--tRNA ligase yes yes 2 0.00033035 88.948 By MS/MS By MS/MS By MS/MS 1 1 1 33447000 8933000 11290000 0 0 0 13224000 0 0 1754 45 1899 9958;9959;9960 7499;7500;7501 7500 3 8933000 11556000 0 0 0 14650000 0 0 HGCALGSIVGK AFGTPPSDAEAIKVRHGCALGSIVGKDESV IKVRHGCALGSIVGKDESVEVPSVGGRPPR R H G G K D 1 0 0 0 1 0 0 3 1 1 1 1 0 0 0 1 0 0 0 1 0 0 11 0 0 1 1097.5652 P0ABH0 P0ABH0 261 271 ftsA Cell division protein FtsA yes yes 2 4.2692E-08 132.84 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55518000 16207000 13906000 0 0 11468000 13937000 0 0 1755 199 1900 9961;9962;9963;9964 7502;7503 7502 2 16207000 14234000 0 0 13834000 15439000 0 0 HGCALGSIVGKDESVEVPSVGGRPPR AFGTPPSDAEAIKVRHGCALGSIVGKDESV DESVEVPSVGGRPPRSLQRQTLAEVIEPRY R H G P R S 1 2 0 1 1 0 2 5 1 1 1 1 0 0 3 3 0 0 0 4 0 0 26 2 2 4 2659.35 P0ABH0 P0ABH0 261 286 ftsA Cell division protein FtsA yes yes 4;5 1.751E-164 204.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 598470000 258540000 117380000 3910900 4847800 114050000 99747000 0 0 1756 199 1901 9965;9966;9967;9968;9969;9970;9971;9972;9973;9974 7504;7505;7506;7507;7508;7509;7510;7511 7508 8 258540000 120150000 33230000 36754000 137580000 110500000 0 0 HGEALLK DHHVDVTYKTLRSLKHGEALLKMECCGVCH YKTLRSLKHGEALLKMECCGVCHTDLHVKN K H G L K M 1 0 0 0 0 0 1 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 1 1 766.43374 P39451 P39451 24 30 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2 1.025E-11 101.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 54469000 18704000 19280000 0 0 8772500 7712400 0 0 1757 364 1902 9975;9976;9977;9978;9979 7512;7513;7514;7515;7516 7512 4 18704000 19735000 0 0 10582000 8543600 0 0 HGFLPLK EPSLEAAFVDYGAERHGFLPLKEIAREYFP FVDYGAERHGFLPLKEIAREYFPANYSAHG R H G L K E 0 0 0 0 0 0 0 1 1 0 2 1 0 1 1 0 0 0 0 0 0 0 7 0 0 1 810.47521 P21513 P21513 65 71 rne Ribonuclease E yes yes 2 0.001053 103.41 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33207000 7832300 6771400 0 0 6930900 11672000 0 0 1758 297 1903 9980;9981;9982;9983 7517;7518;7519;7520 7518 4 7832300 6931200 0 0 8360800 12930000 0 0 HGGGGGGFGGGGFGSR GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS GGGGGGFGGGGFGSRSLVGLGGTKSISISV R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 0 16 0 0 0 1319.5755 CON__P35908v2;CON__P35908 CON__P35908v2 46 61 yes no 2;3 6.2508E-36 178.71 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 546140000 58747000 89091000 0 0 185860000 212440000 0 0 + 1759 16 1904 9984;9985;9986;9987;9988;9989;9990;9991;9992 7521;7522;7523;7524;7525;7526;7527;7528 7528 8 81692000 91194000 0 0 224210000 235330000 0 0 HGHLQCLPK VQHFADDVIAQRGVRHGHLQCLPKED____ AQRGVRHGHLQCLPKED_____________ R H G P K E 0 0 0 0 1 1 0 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 9 0 0 1 1088.5549 P0A6Z6 P0A6Z6 123 131 nikR Nickel-responsive regulator yes yes 3 9.4541E-10 118.74 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 104630000 22598000 30975000 0 0 26150000 24907000 0 0 1760 89 1905 9993;9994;9995;9996;9997;9998 7529;7530;7531;7532 7531 4 38863000 61490000 0 0 31544000 27591000 0 0 HGHLQCLPKED VQHFADDVIAQRGVRHGHLQCLPKED____ RGVRHGHLQCLPKED_______________ R H G E D - 0 0 0 1 1 1 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 11 1 1 1 1332.6245 P0A6Z6 P0A6Z6 123 133 nikR Nickel-responsive regulator yes yes 3 0.0016043 53.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39074000 18504000 0 0 0 0 20570000 0 0 1761 89 1906 9999;10000;10001;10002 7533;7534;7535;7536 7533 4 18504000 0 0 0 0 22787000 0 0 HGHNEADEPSATQPLMYQK TFKRDVFIDLVCYRRHGHNEADEPSATQPL EADEPSATQPLMYQKIKKHPTPRKIYADKL R H G Q K I 2 0 1 1 0 2 2 1 2 0 1 1 1 0 2 1 1 0 1 0 0 0 19 0 2 4 2151.9644 P0AFG3 P0AFG3 458 476 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3;4 1.7806E-90 173.37 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 257400000 71101000 80936000 0 0 52029000 53332000 0 0 1762 246 1907;1908 10003;10004;10005;10006;10007;10008;10009;10010;10011;10012;10013;10014 7537;7538;7539;7540;7541;7542;7543;7544;7545;7546;7547;7548 7547 220 12 71101000 82846000 0 0 62762000 59080000 0 0 HGIPIDADYVFDVR RERELTMVFESFGFKHGIPIDADYVFDVRF KHGIPIDADYVFDVRFLPNPHWDPKLRPMT K H G V R F 1 1 0 3 0 0 0 1 1 2 0 0 0 1 1 0 0 0 1 2 0 0 14 0 0 2 1615.7995 P0A894 P0A894 171 184 rapZ RNase adapter protein RapZ yes yes 3 1.8284E-11 95.651 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 66355000 17226000 15366000 0 0 15569000 18194000 0 0 1763 141 1909 10015;10016;10017;10018 7549;7550;7551;7552 7552 4 17226000 15729000 0 0 18781000 20155000 0 0 HGISNLK DVTATNRETLEQRYRHGISNLKLKHANHK_ ETLEQRYRHGISNLKLKHANHK________ R H G L K L 0 0 1 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 0 0 767.42899 P61517 P61517 207 213 can Carbonic anhydrase 2 yes yes 2 1.3595E-57 173.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 751060000 260650000 318580000 0 0 105950000 65881000 0 0 1764 386 1910 10019;10020;10021;10022;10023 7553;7554;7555;7556;7557;7558;7559;7560 7559 8 260650000 326100000 0 0 134890000 72981000 0 0 HGIWYTDLPAALDVIQR HGHSQKTNTGGENSKHGIWYTDLPAALDVI IWYTDLPAALDVIQRHHLQLVGIHMHIGSG K H G Q R H 2 1 0 2 0 1 0 1 1 2 2 0 0 0 1 0 1 1 1 1 0 0 17 0 0 3 1967.0265 P00861 P00861 164 180 lysA Diaminopimelate decarboxylase yes yes 3 0.0038876 34.094 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 79436000 18952000 23117000 0 0 18628000 18739000 0 0 1765 28 1911 10024;10025;10026;10027 7561 7561 1 18952000 23663000 0 0 22471000 20759000 0 0 HGKTIVVYGTR GRILKMLEDQNLISAHGKTIVVYGTR____ LISAHGKTIVVYGTR_______________ A H G T R - 0 1 0 0 0 0 0 2 1 1 0 1 0 0 0 0 2 0 1 2 0 0 11 1 0 0 1229.6881 P0ACJ8 P0ACJ8 200 210 crp cAMP-activated global transcriptional regulator CRP yes yes 3 0.0011784 59.198 By MS/MS By MS/MS 1 2 7067900 0 638120 0 0 0 6429800 0 0 1766 213 1912 10028;10029;10030 7562 7562 1 0 3819100 0 0 0 12687000 0 0 HGLCSDLGFSDADR KLGVSTYLLDGDNVRHGLCSDLGFSDADRK RHGLCSDLGFSDADRKENIRRVGEVANLMV R H G D R K 1 1 0 3 1 0 0 2 1 0 2 0 0 1 0 2 0 0 0 0 0 0 14 0 0 1 1548.6627 P0A6J1 P0A6J1 69 82 cysC Adenylyl-sulfate kinase yes yes 3 2.2981E-05 70.622 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22911000 6440700 7409800 0 0 4960300 4100700 0 0 1767 73 1913 10031;10032;10033;10034 7563;7564;7565;7566 7564 4 6440700 7584700 0 0 5983600 4542600 0 0 HGLCSDLGFSDADRK KLGVSTYLLDGDNVRHGLCSDLGFSDADRK HGLCSDLGFSDADRKENIRRVGEVANLMVE R H G R K E 1 1 0 3 1 0 0 2 1 0 2 1 0 1 0 2 0 0 0 0 0 0 15 1 0 1 1676.7577 P0A6J1 P0A6J1 69 83 cysC Adenylyl-sulfate kinase yes yes 3 1.6715E-31 137.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 65587000 24153000 15537000 0 0 12004000 13893000 0 0 1768 73 1914 10035;10036;10037;10038 7567;7568;7569;7570;7571 7567 5 24153000 15904000 0 0 14481000 15390000 0 0 HGLEQTIADTLGPGGIMR GYEPCTVTDFEVCKRHGLEQTIADTLGPGG EQTIADTLGPGGIMRALRTIPHLWQICEDM R H G M R A 1 1 0 1 0 1 1 4 1 2 2 0 1 0 1 0 2 0 0 0 0 0 18 0 1 2 1864.9465 P06720 P06720 105 122 melA Alpha-galactosidase yes yes 3 0.010866 26.548 By MS/MS By MS/MS By MS/MS 1 1 1 14810000 0 5668100 0 0 4379300 4762400 0 0 1769 52 1915 10039;10040;10041 7572 7572 1 0 5801900 0 0 5282700 5275600 0 0 HGLGISCLSR AMELGNSEAIKHAVRHGLGISCLSRRVIED KHAVRHGLGISCLSRRVIEDQLQAGTLSEV R H G S R R 0 1 0 0 1 0 0 2 1 1 2 0 0 0 0 2 0 0 0 0 0 0 10 0 0 0 1098.5604 P0ACR4 P0ACR4 230 239 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2;3 1.5476E-110 237.08 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 342490000 121290000 89015000 0 0 66140000 66042000 0 0 1770 218 1916 10042;10043;10044;10045;10046;10047;10048;10049 7573;7574;7575;7576;7577;7578;7579;7580 7573 8 121290000 91116000 0 0 79784000 73160000 0 0 HGLINFGIYK SDTVLVHRVHSYLERHGLINFGIYKRIKPL SYLERHGLINFGIYKRIKPLPTKKTGKVII R H G Y K R 0 0 1 0 0 0 0 2 1 2 1 1 0 1 0 0 0 0 1 0 0 0 10 0 0 0 1160.6342 LSD1-FL-His LSD1-FL-His 261 270 yes yes 2;3 1.392E-101 221.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 9 1 8 7 25842000000 8414000000 51146000 0 846700 8720400000 8656100000 0 0 1771 24 1917 10050;10051;10052;10053;10054;10055;10056;10057;10058;10059;10060;10061;10062;10063;10064;10065;10066;10067;10068;10069;10070;10071;10072;10073;10074;10075;10076;10077;10078;10079;10080;10081;10082 7581;7582;7583;7584;7585;7586;7587;7588;7589;7590;7591;7592;7593;7594;7595;7596;7597;7598;7599;7600;7601;7602;7603;7604;7605;7606 7591 26 8532100000 97846000 0 6419300 10686000000 9640500000 0 0 HGLINFGIYKR SDTVLVHRVHSYLERHGLINFGIYKRIKPL YLERHGLINFGIYKRIKPLPTKKTGKVIII R H G K R I 0 1 1 0 0 0 0 2 1 2 1 1 0 1 0 0 0 0 1 0 0 0 11 1 0 0 1316.7353 LSD1-FL-His LSD1-FL-His 261 271 yes yes 2;3 3.5671E-288 270.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 3535700000 952980000 815130000 0 0 686920000 1080700000 0 0 1772 24 1918 10083;10084;10085;10086;10087;10088;10089;10090;10091 7607;7608;7609;7610;7611;7612;7613;7614;7615;7616;7617 7617 11 952980000 834370000 0 0 860260000 1197200000 0 0 HGLQSILR QALSMSLVGDKAKVRHGLQSILRETDADEI GDKAKVRHGLQSILRETDADEIMVNGQIFD R H G L R E 0 1 0 0 0 1 0 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 0 0 922.53485 P0ADV5 P0ADV5 293 300 yhbW Uncharacterized protein YhbW yes yes 2 4.8596E-126 209.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1651900000 499870000 582470000 0 0 302350000 267260000 0 0 1773 226 1919 10092;10093;10094;10095 7618;7619;7620;7621;7622;7623 7621 6 499870000 596220000 0 0 364730000 296060000 0 0 HGNILEIAQR HAARQLLEQTLPAIKHGNILEIAQRENEAT LPAIKHGNILEIAQRENEATCFGRRTPDDS K H G Q R E 1 1 1 0 0 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1 1 1149.6255 P77398 P77398 182 191 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 2.2071E-76 153.24 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 2 3 17635000000 4982500000 3885100000 0 0 3570000000 5197100000 0 0 1774 432 1920 10096;10097;10098;10099;10100;10101;10102;10103;10104;10105;10106;10107;10108 7624;7625;7626;7627;7628;7629;7630;7631 7625 5 5097500000 4058000000 0 0 4306500000 5887400000 0 0 HGNILEIAQRENEATCFGR HAARQLLEQTLPAIKHGNILEIAQRENEAT LEIAQRENEATCFGRRTPDDSFLEWHKPAS K H G G R R 2 2 2 0 1 1 3 2 1 2 1 0 0 1 0 0 1 0 0 0 0 0 19 1 3 2 2214.06 P77398 P77398 182 200 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 4 6.251E-13 87.85 By MS/MS By MS/MS 1 1 20537000 10259000 10278000 0 0 0 0 0 0 1775 432 1921 10109;10110 7632;7633 7632 2 10259000 10521000 0 0 0 0 0 0 HGNVMLDPGKR ALMRRTNGQASNELRHGNVMLDPGKRIATL NELRHGNVMLDPGKRIATLAGEPLTLKPKE R H G K R I 0 1 1 1 0 0 0 2 1 0 1 1 1 0 1 0 0 0 0 1 0 0 11 1 0 1 1222.6241 P52076 P52076 129 139 qseB Transcriptional regulatory protein QseB yes yes 3 0.00017085 55.401 By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 16271000 6160000 6562000 0 0 2344700 1204300 0 0 1776 374 1922 10111;10112;10113;10114;10115 7634;7635;7636;7637;7638 7636 5 6160000 6716900 0 0 2828400 1716800 0 0 HGPLALIDADMPVIVVAPNNELLEK ISYIHAEAYAAGELKHGPLALIDADMPVIV MPVIVVAPNNELLEKLKSNIEEVRARGGQL K H G E K L 3 0 2 2 0 0 2 1 1 2 4 1 1 0 3 0 0 0 0 3 0 0 25 0 2 6 2667.4306 P17169 P17169 505 529 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 3.1262E-84 160.47 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 5 3 2834700000 533560000 710270000 0 0 573580000 1017300000 0 0 1777 288 1923;1924 10116;10117;10118;10119;10120;10121;10122;10123;10124;10125;10126;10127;10128;10129;10130 7639;7640;7641;7642;7643;7644;7645;7646;7647;7648;7649;7650 7639 240 12 563530000 739530000 0 0 831660000 1126900000 0 0 HGQVVSVGK EPPAPTVLQKLVDEKHGQVVSVGKIADIYA KLVDEKHGQVVSVGKIADIYANCGITKKVK K H G G K I 0 0 0 0 0 1 0 2 1 0 0 1 0 0 0 1 0 0 0 3 0 0 9 0 0 0 909.50321 P0A6K6 P0A6K6 251 259 deoB Phosphopentomutase yes yes 2 2.3331E-06 89.029 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 106290000 39369000 29046000 0 0 20940000 16933000 0 0 1778 75 1925 10131;10132;10133;10134 7651;7652;7653;7654 7653 3 39369000 29732000 0 0 25260000 18758000 0 0 HGSGSGHSSSYGQHGSGSGWSSSSGR GRHGAGSGQSPSRGRHGSGSGHSSSYGQHG GQHGSGSGWSSSSGRHGSGSGQSSGFGHHE R H G G R H 0 1 0 0 0 1 0 8 3 0 0 0 0 0 0 11 0 1 1 0 0 0 26 0 0 0 2476.0137 CON__Q86YZ3 CON__Q86YZ3 1365 1390 yes no 4 0.001766 28.951 By MS/MS By MS/MS 1 1 9738500 0 0 0 0 6426300 3312200 0 0 + 1779 22 1926 10135;10136 7655;7656 7656 2 0 0 0 0 7752000 3669200 0 0 HGSGSGQSSSYGPYR HGSGSGQSPSPSRGRHGSGSGQSSSYGPYR HGSGSGQSSSYGPYRSGSGWSSSRGPYESG R H G Y R S 0 1 0 0 0 1 0 4 1 0 0 0 0 0 1 5 0 0 2 0 0 0 15 0 0 1 1525.6546 CON__Q86YZ3 CON__Q86YZ3 1014 1028 yes yes 3 0.018373 25.319 By matching By MS/MS 1 1 4098900 0 0 0 0 1682800 2416100 0 0 + 1780 22 1927 10137;10138 7657 7657 1 0 0 0 0 2030000 2676500 0 0 HGSGSGQSSSYSPYGSGSGWSSSR HGSGSGQSPSPSRGRHGSGSGQSSSYSPYG SYSPYGSGSGWSSSRGPYESGSSHSSGLGH R H G S R G 0 1 0 0 0 1 0 6 1 0 0 0 0 0 1 11 0 1 2 0 0 0 24 0 0 1 2347.969 CON__Q86YZ3 CON__Q86YZ3 1484 1507 yes no 3 6.0133E-11 65.425 By matching By matching By MS/MS By MS/MS 1 1 1 1 22906000 3167300 2948000 0 0 8191100 8599800 0 0 + 1781 22 1928 10139;10140;10141;10142 7658 7658 1 3167300 3017600 0 0 9880900 9526600 0 0 HGVDNDATLE FCEYTSHGHCGVLCEHGVDNDATLENLGKQ GVLCEHGVDNDATLENLGKQAVVAAAAGAD E H G L E N 1 0 1 2 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 10 0 0 1 1069.4676 P0ACB2 P0ACB2 136 145 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.0024945 68.224 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 57123000 3420400 3613100 9780700 10824000 3026800 2279900 9452300 14727000 1782 207 1929 10143;10144;10145;10146;10147;10148;10149;10150 7659;7660;7661;7662;7663;7664;7665;7666 7666 8 52553000 55100000 83105000 82060000 46600000 34555000 72747000 84514000 HGVQELEIELQSQLSK GQEVQSSAKEVTQLRHGVQELEIELQSQLS GVQELEIELQSQLSKKAALEKSLEDTKNRY R H G S K K 0 0 0 0 0 3 3 1 1 1 3 1 0 0 0 2 0 0 0 1 0 0 16 0 3 0 1836.9581 CON__P35527 CON__P35527 375 390 yes yes 2;3 0 327.94 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 295410000 20961000 24343000 0 0 119650000 130450000 0 0 + 1783 15 1930 10151;10152;10153;10154;10155;10156;10157;10158;10159 7667;7668;7669;7670;7671;7672;7673;7674 7672 8 20961000 24917000 0 0 163000000 144510000 0 0 HGVTMLTLGQYLQPSR ETNEEIIEVMRDLRRHGVTMLTLGQYLQPS GVTMLTLGQYLQPSRHHLPVQRYVSPDEFD R H G S R H 0 1 0 0 0 2 0 2 1 0 3 0 1 0 1 1 2 0 1 1 0 0 16 0 0 1 1799.9352 P60716 P60716 255 270 lipA Lipoyl synthase yes yes 3 3.7118E-16 95.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37452000 11082000 9227100 0 0 7558200 9584700 0 0 1784 382 1931 10160;10161;10162;10163 7675;7676 7676 2 11082000 9444900 0 0 9117500 10618000 0 0 HHALFLGR QDKRIEALAEDFSDKHHALFLGRGDQYPIA AEDFSDKHHALFLGRGDQYPIALEGALKLK K H H G R G 1 1 0 0 0 0 0 1 2 0 2 0 0 1 0 0 0 0 0 0 0 0 8 0 0 1 949.52462 P17169 P17169 466 473 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 6.9262E-74 189.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 304250000 92365000 66218000 0 0 65017000 80651000 0 0 1785 288 1932 10164;10165;10166;10167 7677;7678;7679;7680;7681;7682;7683;7684 7682 8 92365000 67781000 0 0 78430000 89343000 0 0 HHFPPFAGFR LGEMLLASFEKHPLRHHFPPFAGFRVVESS KHPLRHHFPPFAGFRVVESSSYYGKGYQDV R H H F R V 1 1 0 0 0 0 0 1 2 0 0 0 0 3 2 0 0 0 0 0 0 0 10 0 0 3 1211.5988 P77398 P77398 592 601 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 9.0865E-35 136.27 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 4 20 2864600000 786160000 669500000 0 0 1212900000 196000000 0 0 1786 432 1933 10168;10169;10170;10171;10172;10173;10174;10175;10176;10177;10178;10179;10180;10181;10182;10183;10184;10185;10186;10187;10188;10189;10190;10191;10192;10193;10194;10195;10196;10197;10198 7685;7686;7687;7688;7689;7690;7691;7692;7693;7694;7695;7696;7697;7698;7699;7700;7701;7702;7703;7704;7705;7706;7707;7708;7709;7710;7711;7712;7713;7714;7715;7716;7717;7718;7719;7720;7721;7722;7723;7724;7725;7726;7727;7728;7729;7730;7731;7732;7733;7734;7735;7736;7737;7738;7739;7740;7741;7742;7743;7744;7745;7746;7747;7748;7749;7750;7751;7752;7753;7754;7755;7756;7757;7758;7759;7760;7761;7762;7763;7764;7765;7766;7767;7768;7769 7752 85 933850000 740430000 0 0 1609200000 217130000 0 0 HHGGAALPSSSVNTPWHDR RRDLNELAEQNLILRHHGGAALPSSSVNTP AALPSSSVNTPWHDRKATQTEEKERIARKV R H H D R K 2 1 1 1 0 0 0 2 3 0 1 0 0 0 2 3 1 1 0 1 0 0 19 0 0 4 2024.9565 P0ACL0 P0ACL0 52 70 glpR Glycerol-3-phosphate regulon repressor yes yes 3;4 4.9878E-44 136.34 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 415390000 104700000 134800000 0 0 81513000 94383000 0 0 1787 215 1934 10199;10200;10201;10202;10203;10204;10205;10206;10207 7770;7771;7772;7773;7774;7775;7776;7777;7778 7775 9 123710000 137980000 0 0 98329000 104560000 0 0 HHGGAALPSSSVNTPWHDRK RRDLNELAEQNLILRHHGGAALPSSSVNTP ALPSSSVNTPWHDRKATQTEEKERIARKVA R H H R K A 2 1 1 1 0 0 0 2 3 0 1 1 0 0 2 3 1 1 0 1 0 0 20 1 0 4 2153.0515 P0ACL0 P0ACL0 52 71 glpR Glycerol-3-phosphate regulon repressor yes yes 4 1.9178E-25 102.89 By MS/MS 1 39206000 0 0 0 0 39206000 0 0 0 1788 215 1935 10208 7779;7780 7780 2 0 0 0 0 47294000 0 0 0 HHITADGYYR TSLSVDKTSGEKHLRHHITADGYYRGRKVI EKHLRHHITADGYYRGRKVIAK________ R H H Y R G 1 1 0 1 0 0 0 1 2 1 0 0 0 0 0 0 1 0 2 0 0 0 10 0 0 1 1231.5734 P0A7N4 P0A7N4 41 50 rpmF 50S ribosomal protein L32 yes yes 2;3 1.4208E-62 148.94 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 388930000 92424000 98291000 0 0 90922000 107300000 0 0 1789 116 1936 10209;10210;10211;10212;10213;10214;10215;10216;10217;10218 7781;7782;7783;7784;7785;7786;7787;7788;7789 7785 9 102210000 100610000 0 0 115480000 118860000 0 0 HHKGDVFATAR VTMRSETLAMIIDGRHHKGDVFATARIAGI IDGRHHKGDVFATARIAGIQAAKRTWDLIP R H H A R I 2 1 0 1 0 0 0 1 2 0 0 1 0 1 0 0 1 0 0 1 0 0 11 1 0 2 1237.6316 P0A738 P0A738 49 59 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 3 0.022026 26.659 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 63987000 15575000 22753000 0 0 12440000 13218000 0 0 1790 93 1937 10219;10220;10221;10222 7790 7790 1 15575000 23290000 0 0 15007000 14643000 0 0 HHQLQALALLR RRGMQNTPDMRERVRHHQLQALALLRMDNI ERVRHHQLQALALLRMDNIDEEALHQIWSR R H H L R M 2 1 0 0 0 2 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 11 0 0 2 1298.7571 P27249 P27249 641 651 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 3.4792E-05 87.298 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 141290000 34216000 38458000 0 0 31542000 37071000 0 0 1791 320 1938 10223;10224;10225;10226;10227;10228;10229;10230 7791;7792;7793;7794;7795 7795 5 34216000 39365000 0 0 38049000 41067000 0 0 HHQQALEIAR DQADSQETLALAVTKHHQQALEIARALHQQ LAVTKHHQQALEIARALHQQRQQYAEELAQ K H H A R A 2 1 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 10 0 1 2 1201.6316 P05824 P05824 353 362 recN DNA repair protein RecN yes yes 3 1.7949E-05 85.533 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 86012000 26040000 31508000 1459500 1415000 12794000 12795000 0 0 1792 49 1939 10231;10232;10233;10234;10235;10236 7796;7797;7798;7799 7797 3 26040000 32252000 12401000 10728000 15433000 14174000 0 0 HIAHDFNDPLTWSHNR NKSEITDEEYKEFYKHIAHDFNDPLTWSHN IAHDFNDPLTWSHNRVEGKQEYTSLLYIPS K H I N R V 1 1 2 2 0 0 0 0 3 1 1 0 0 1 1 1 1 1 0 0 0 0 16 0 0 2 1958.9136 P0A6Z3 P0A6Z3 252 267 htpG Chaperone protein HtpG yes yes 4 1.1547E-16 97.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 104870000 21503000 33223000 0 0 19516000 30623000 0 0 1793 88 1940 10237;10238;10239;10240 7800;7801;7802;7803 7803 4 21503000 34007000 0 0 23543000 33924000 0 0 HIDSTERQQLA DHTNVLMHVQGYFRPHIDSTERQQLAALID YFRPHIDSTERQQLAALIDSYRRGEQPLLA P H I L A A 1 1 0 1 0 2 1 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 11 1 1 0 1296.6422 P24252 P24252 106 116 ybgA Uncharacterized protein YbgA yes yes 2 0.00085129 71.223 By MS/MS By MS/MS By MS/MS 1 1 1 13550000 3767000 3445000 0 0 0 6338300 0 0 1794 313 1941 10241;10242;10243 7804;7805 7805 2 22740000 20618000 0 0 0 9035200 0 0 HIFSEGFWPSDK RLLIGDVALFLELQKHIFSEGFWPSDKFYA LQKHIFSEGFWPSDKFYAAKVEEQNQRHQR K H I D K F 0 0 0 1 0 0 1 1 1 1 0 1 0 2 1 2 0 1 0 0 0 0 12 0 1 1 1448.6725 P27249 P27249 181 192 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 2.4382E-07 100.48 By MS/MS By MS/MS By MS/MS 1 1 1 114880000 0 31911000 0 0 41054000 41915000 0 0 1795 320 1942 10244;10245;10246 7806;7807;7808 7808 3 0 32664000 0 0 49524000 46432000 0 0 HIGESASDILRR EVDDELYSYIASHTKHIGESASDILRRMLK HTKHIGESASDILRRMLKFSAASQPAAPVT K H I R R M 1 2 0 1 0 0 1 1 1 2 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1 1 1352.7161 P0AFY8 P0AFY8 20 31 seqA Negative modulator of initiation of replication yes yes 3 0.0054952 20.463 By MS/MS 1 0 0 0 0 0 0 0 0 0 1796 252 1943 10247 7809 7809 1 0 0 0 0 0 0 0 0 HILANFENLPVAGEYMHR YIGTNQPEVLTEIRRHILANFENLPVAGEY ANFENLPVAGEYMHRDIYDIAEKYGKDTFL R H I H R D 2 1 2 0 0 0 2 1 2 1 2 0 1 1 1 0 0 0 1 1 0 0 18 0 2 3 2110.0418 P06149 P06149 295 312 dld D-lactate dehydrogenase yes yes 3 0.0093299 28.083 By matching By MS/MS 1 2 7742300 401150 0 0 0 0 7341100 0 0 1797 50 1944 10248;10249;10250 7810 7810 1 6163600 0 0 0 0 29208000 0 0 HILNEQHGYK LLTGFLGAGKTTLLRHILNEQHGYKIAVIE TTLLRHILNEQHGYKIAVIENEFGEVSVDD R H I Y K I 0 0 1 0 0 1 1 1 2 1 1 1 0 0 0 0 0 0 1 0 0 0 10 0 1 0 1237.6204 P24203 P24203 23 32 yjiA Uncharacterized GTP-binding protein YjiA yes yes 3 8.7396E-05 90.05 By MS/MS By MS/MS By MS/MS 1 1 1 22831000 8070200 9535900 0 0 5225200 0 0 0 1798 311 1945 10251;10252;10253 7811;7812;7813 7812 3 8070200 9761000 0 0 6303100 0 0 0 HILVDEFQDISPQR AIVILEKGRFISPWKHILVDEFQDISPQRA KHILVDEFQDISPQRAALLAALRKQNSQTT K H I Q R A 0 1 0 2 0 2 1 0 1 2 1 0 0 1 1 1 0 0 0 1 0 0 14 0 1 1 1695.858 P15038 P15038 433 446 helD Helicase IV yes yes 2;3 6.3544E-40 178.81 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 153570000 36106000 36222000 0 0 39558000 41686000 0 0 1799 281 1946 10254;10255;10256;10257;10258;10259;10260;10261 7814;7815;7816;7817;7818;7819;7820;7821 7819 8 36106000 37077000 0 0 47719000 46179000 0 0 HIPEFVR NEAALKMLEEISSVKHIPEFVRRAKDKNDS LEEISSVKHIPEFVRRAKDKNDSFRLMGFG K H I V R R 0 1 0 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 7 0 1 1 896.48684 P0ABH7 P0ABH7 284 290 gltA Citrate synthase yes yes 2 0.0033888 72.021 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 64546000 15410000 16102000 0 0 14576000 17335000 0 1122500 1800 200 1947 10262;10263;10264;10265;10266 7822;7823;7824;7825 7825 4 15410000 16482000 0 0 17583000 19204000 0 6441800 HIPVLVYGPKVKPGSLGHRE HGCDPTWTGTDHTREHIPVLVYGPKVKPGS VYGPKVKPGSLGHRETFADIGQTLAKYFGT E H I R E T 0 1 0 0 0 0 1 3 2 1 2 2 0 0 3 1 0 0 1 3 0 0 20 3 0 3 2182.2375 P0A6K6 P0A6K6 363 382 deoB Phosphopentomutase yes yes 4;5 5.8315E-27 102.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 273710000 16923000 20850000 49231000 74270000 14533000 15442000 36036000 46421000 1801 75 1948 10267;10268;10269;10270;10271;10272;10273;10274;10275;10276;10277;10278;10279;10280;10281;10282 7826;7827;7828;7829;7830;7831;7832;7833;7834;7835;7836;7837;7838;7839;7840;7841;7842;7843;7844;7845 7839 19 260020000 317960000 418310000 563080000 223750000 234050000 277340000 266410000 HISCQNEIGMVPISEEEVTQEDVENVVHTAK ADCQISSVYLALSGKHISCQNEIGMVPISE EVTQEDVENVVHTAKSVRVRDEHRVLHVIP K H I A K S 1 0 2 1 1 2 6 1 2 3 0 1 1 0 1 2 2 0 0 5 0 0 31 0 6 2 3520.645 P0ABH0 P0ABH0 87 117 ftsA Cell division protein FtsA yes yes 3;4 2.0397E-97 155.14 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 273610000 80762000 67625000 0 0 53707000 71512000 0 0 1802 199 1949;1950 10283;10284;10285;10286;10287;10288;10289;10290;10291;10292 7846;7847;7848;7849;7850;7851;7852;7853;7854;7855 7851 179 10 80762000 69221000 0 0 64787000 79219000 0 0 HIVDGFSFELSK HPRLFWLSQTPFEQRHIVDGFSFELSKVVR EQRHIVDGFSFELSKVVRPYIRERVVDQLA R H I S K V 0 0 0 1 0 0 1 1 1 1 1 1 0 2 0 2 0 0 0 1 0 0 12 0 1 0 1377.6929 P21179 P21179 522 533 katE Catalase HPII yes yes 2 6.0056E-85 222.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 103780000 20278000 20838000 0 0 34743000 27924000 0 0 1803 293 1951 10293;10294;10295;10296 7856;7857;7858;7859 7856 4 20278000 21330000 0 0 41910000 30933000 0 0 HIVGAIANEGDISSR LYRIEVGRDDGVEVRHIVGAIANEGDISSR HIVGAIANEGDISSRYIGNIKLFASHSTIE R H I S R Y 2 1 1 1 0 0 1 2 1 3 0 0 0 0 0 2 0 0 0 1 0 0 15 0 1 2 1537.7849 P0A9P6 P0A9P6 503 517 deaD ATP-dependent RNA helicase DeaD yes yes 2;3 7.4393E-12 69.979 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 53622000 11148000 13431000 0 0 10697000 18345000 0 0 1804 173 1952 10297;10298;10299;10300;10301;10302;10303;10304 7860;7861;7862;7863;7864;7865 7860 5 11148000 13748000 0 0 12904000 20322000 0 0 HIVVVHNGIIE HGEPSEVNAHPHVSEHIVVVHNGIIENHEP HVSEHIVVVHNGIIENHEPLREELKARGYT E H I I E N 0 0 1 0 0 0 1 1 2 3 0 0 0 0 0 0 0 0 0 3 0 0 11 0 0 0 1228.6928 P17169 P17169 93 103 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 5.6994E-38 154.28 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 3 3 2 2 2386800000 159590000 169590000 441440000 444000000 128420000 148550000 429320000 465850000 1805 288 1953 10305;10306;10307;10308;10309;10310;10311;10312;10313;10314;10315;10316;10317;10318;10319;10320;10321;10322;10323 7866;7867;7868;7869;7870;7871;7872;7873 7866 8 2452100000 2522200000 3750800000 3366200000 1875900000 2129000000 3304100000 2673400000 HKAEYTPHVDTGDYIIVLNADK LGRLATELARRLRGKHKAEYTPHVDTGDYI HVDTGDYIIVLNADKVAVTGNKRTDKVYYH K H K D K V 2 0 1 3 0 0 1 1 2 2 1 2 0 0 1 0 2 0 2 2 0 0 22 1 1 3 2498.2442 P0AA10 P0AA10 40 61 rplM 50S ribosomal protein L13 yes yes 3;4 3.6857E-174 211.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1110100000 244440000 265180000 0 0 265250000 335250000 0 0 1806 182 1954 10324;10325;10326;10327;10328;10329;10330;10331 7874;7875;7876;7877;7878;7879;7880;7881;7882 7882 9 244440000 271430000 0 0 319970000 371380000 0 0 HKANLTAQINK RQAAKGLIHKNKAARHKANLTAQINKLA__ KAARHKANLTAQINKLA_____________ R H K N K L 2 0 2 0 0 1 0 0 1 1 1 2 0 0 0 0 1 0 0 0 0 0 11 1 0 2 1236.6939 P0A7U7 P0A7U7 75 85 rpsT 30S ribosomal protein S20 yes yes 3 6.0705E-06 92.538 By MS/MS 1 12638000 0 0 0 0 12638000 0 0 0 1807 127 1955 10332 7883 7883 1 0 0 0 0 15245000 0 0 0 HKEHLGTGDVK LGKKPQDLFDEFAGKHKEHLGTGDVKYHMG FAGKHKEHLGTGDVKYHMGFSSDFQTDGGL K H K V K Y 0 0 0 1 0 0 1 2 2 0 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1 0 1219.6309 P0AFG3 P0AFG3 286 296 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 6.7866E-05 80.245 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 106770000 33681000 34011000 0 0 24524000 14556000 0 0 1808 246 1956 10333;10334;10335;10336;10337 7884;7885;7886;7887 7885 4 39139000 34813000 0 0 29583000 16124000 0 0 HKEMPFPK EVMGVSKVKEAMAPKHKEMPFPKYPVEPFT KEAMAPKHKEMPFPKYPVEPFTESQSLTLT K H K P K Y 0 0 0 0 0 0 1 0 1 0 0 2 1 1 2 0 0 0 0 0 0 0 8 1 1 2 1012.5164 CON__P02666 CON__P02666 106 113 yes yes 2 0.0045994 90.657 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 40166000 7922700 9136700 0 0 10682000 12425000 0 0 + 1809 8 1957 10338;10339;10340;10341;10342;10343;10344;10345;10346 7888;7889;7890;7891 7890 3 14791000 14688000 0 0 106050000 75696000 0 0 HKFVTLE GIRPPLRLGEFTMPEHKFVTLEDTPLIGVT LGEFTMPEHKFVTLEDTPLIGVTQSYSCSL E H K L E D 0 0 0 0 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 1 0 0 7 1 0 0 872.4756 P0ACI0 P0ACI0 128 134 rob Right origin-binding protein yes yes 2 0.017528 73.039 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26400000 7401400 6740000 0 0 5488700 6769600 0 0 1810 211 1958 10347;10348;10349;10350 7892 7892 1 113720000 102790000 0 0 84503000 102600000 0 0 HKPYSIGDSYISE ILNDAFGALSCALAEHKPYSIGDSYISELA AEHKPYSIGDSYISELATRENLRLNGIDES E H K S E L 0 0 0 1 0 0 1 1 1 2 0 1 0 0 1 3 0 0 2 0 0 0 13 1 0 1 1494.6991 P42596 P42596 65 77 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2;3 1.5236E-24 164.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 2 2 803590000 145230000 112350000 35533000 18962000 70121000 50641000 165640000 205110000 1811 366 1959 10351;10352;10353;10354;10355;10356;10357;10358;10359;10360;10361;10362;10363;10364;10365 7893;7894;7895;7896;7897;7898;7899;7900 7896 8 2231500000 1713400000 301920000 143760000 1079600000 767540000 1274800000 1177100000 HKTPGQTLLKPTAQ NAIRMCIFQHQYLAEHKTPGQTLLKPTAQ_ EHKTPGQTLLKPTAQ_______________ E H K A Q - 1 0 0 0 0 2 0 1 1 0 2 2 0 0 2 0 3 0 0 0 0 0 14 2 0 3 1518.8518 P0A951 P0A951 173 186 speG Spermidine N(1)-acetyltransferase yes yes 3 1.9915E-09 83.087 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 220360000 25770000 26910000 22181000 28422000 13401000 18435000 37176000 48066000 1812 160 1960 10366;10367;10368;10369;10370;10371;10372;10373 7901;7902;7903;7904 7901 4 395950000 410380000 188470000 215480000 206320000 279410000 286120000 275850000 HLDALVADEDLSR LSGQNITIDADYVSKHLDALVADEDLSRFI SKHLDALVADEDLSRFIL____________ K H L S R F 2 1 0 3 0 0 1 0 1 0 3 0 0 0 0 1 0 0 0 1 0 0 13 0 1 2 1452.7209 P0A6H5 P0A6H5 428 440 hslU ATP-dependent protease ATPase subunit HslU yes yes 2;3 5.8366E-27 138.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 105770000 20996000 16293000 0 0 28009000 40472000 0 0 1813 71 1961 10374;10375;10376;10377;10378;10379;10380 7905;7906;7907;7908;7909;7910 7905 5 20996000 16678000 0 0 33787000 44834000 0 0 HLDLESGEVWVMGK GAGLRLSELVGLDIKHLDLESGEVWVMGKG KHLDLESGEVWVMGKGSKERRLPIGRNAVA K H L G K G 0 0 0 1 0 0 2 2 1 0 2 1 1 0 0 1 0 1 0 2 0 0 14 0 2 0 1598.7763 P0A8P6 P0A8P6 159 172 xerC Tyrosine recombinase XerC yes yes 2;3 3.8304E-12 91.549 By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 3 24499000 11999000 0 0 874310 5896400 5728800 0 0 1814 150 1962 10381;10382;10383;10384;10385;10386;10387;10388 7911;7912;7913;7914;7915 7915 5 11999000 0 0 6628600 7112900 6346300 0 0 HLDYFHK RCLKINGELYIVANRHLDYFHKLKKIFGNC ELYIVANRHLDYFHKLKKIFGNCTTIATNN R H L H K L 0 0 0 1 0 0 0 0 2 0 1 1 0 1 0 0 0 0 1 0 0 0 7 0 0 0 958.4661 P42596 P42596 343 349 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 0.00092767 104.11 By MS/MS By MS/MS 1 1 65028000 0 37245000 0 0 0 27783000 0 0 1815 366 1963 10389;10390 7916;7917;7918;7919 7916 4 0 38124000 0 0 0 30778000 0 0 HLEDLKEAQQ LPMGMSGIAPVLAGAHLEDLKEAQQ_____ VLAGAHLEDLKEAQQ_______________ A H L Q Q - 1 0 0 1 0 2 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 10 1 2 1 1209.599 P33602 P33602 899 908 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 1.6375E-07 116.37 By MS/MS By MS/MS By MS/MS 2 2 2 31213000 8626600 8609900 0 0 0 13977000 0 0 1816 345 1964 10391;10392;10393;10394;10395;10396 7920;7921;7922;7923 7922 3 52075000 51530000 0 0 0 19924000 0 0 HLGHPVKLEIEPGR HYYGLWNAAREQIARHLGHPVKLEIEPGRF RHLGHPVKLEIEPGRFLVAQSGVLITQVRS R H L G R F 0 1 0 0 0 0 2 2 2 1 2 1 0 0 2 0 0 0 0 1 0 0 14 1 2 2 1580.8787 P00861 P00861 258 271 lysA Diaminopimelate decarboxylase yes yes 3;4 7.9758E-07 77.279 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 103140000 20969000 28246000 0 0 26286000 27641000 0 0 1817 28 1965 10397;10398;10399;10400;10401 7924;7925;7926;7927;7928 7928 4 20969000 28913000 0 0 31709000 30620000 0 0 HLIQQGHTR CIALDDRYGAWLATRHLIQQGHTRIGYLCS AWLATRHLIQQGHTRIGYLCSNHSISDAED R H L T R I 0 1 0 0 0 2 0 1 2 1 1 0 0 0 0 0 1 0 0 0 0 0 9 0 0 0 1088.5839 P03024 P03024 170 178 galR HTH-type transcriptional regulator GalR yes yes 3 0.00014438 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30657000 12142000 12714000 0 0 3697000 2103800 0 0 1818 42 1966 10402;10403;10404;10405 7929;7930;7931;7932 7930 4 12142000 13014000 0 0 4459700 2330500 0 0 HLIYDEILQLAPAGAFNLHGSLLPK IAQLSPDVIFSFYYRHLIYDEILQLAPAGA APAGAFNLHGSLLPKYRGRAPLNWVLVNGE R H L P K Y 3 0 1 1 0 1 1 2 2 2 6 1 0 1 2 1 0 0 1 0 0 0 25 0 1 5 2729.4905 P77398 P77398 86 110 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 2.3336E-11 67.979 By MS/MS By MS/MS 2 1 54444000 0 0 0 0 30590000 23854000 0 0 1819 432 1967 10406;10407;10408 7933;7934 7933 2 0 0 0 0 102060000 26425000 0 0 HLKPIALAGDAR ADNGDANYYLMEAYKHLKPIALAGDARKFK AYKHLKPIALAGDARKFKATIKIADQGEEG K H L A R K 3 1 0 1 0 0 0 1 1 1 2 1 0 0 1 0 0 0 0 0 0 0 12 1 0 4 1260.7303 P21179 P21179 691 702 katE Catalase HPII yes yes 2;3 2.274E-06 96.015 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 652290000 198410000 190810000 0 0 137010000 126060000 0 0 1820 293 1968 10409;10410;10411;10412;10413;10414;10415;10416;10417;10418 7935;7936;7937;7938;7939;7940;7941 7941 7 203850000 195310000 0 0 165280000 139640000 0 0 HLLQHDLSK YFVRHSPNQLAWHARHLLQHDLSKPLVLLS LAWHARHLLQHDLSKPLVLLSPQATRGGTE R H L S K P 0 0 0 1 0 1 0 0 2 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 0 0 1089.5931 P27249 P27249 686 694 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.021007 36.318 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14352000 3228000 5103800 0 0 3132000 2887900 0 0 1821 320 1969 10419;10420;10421;10422 7942 7942 0 3228000 5224300 0 0 3778100 3199100 0 0 HLLQHDLSKPLVLLSPQATR YFVRHSPNQLAWHARHLLQHDLSKPLVLLS DLSKPLVLLSPQATRGGTEIFIWSPDRPYL R H L T R G 1 1 0 1 0 2 0 0 2 0 6 1 0 0 2 2 1 0 0 1 0 0 20 1 0 3 2265.2957 P27249 P27249 686 705 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3;4 8.6263E-28 109.03 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 283660000 81554000 82056000 0 0 57208000 62842000 0 0 1822 320 1970 10423;10424;10425;10426;10427;10428;10429 7943;7944;7945;7946;7947;7948;7949 7943 7 81554000 83993000 0 0 69010000 69615000 0 0 HLLVAYYNLVGIKPGK RGSNKLVDRWLHVRKHLLVAYYNLVGIKPG LLVAYYNLVGIKPGKESYMRLNEKALDDFC K H L G K E 1 0 1 0 0 0 0 2 1 1 3 2 0 0 1 0 0 0 2 2 0 0 16 1 0 2 1784.0349 P0AFX4 P0AFX4 28 43 rsd Regulator of sigma D yes yes 3 7.1004E-11 85.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34515000 6057000 5463000 0 0 10694000 12301000 0 0 1823 251 1971 10430;10431;10432;10433 7950;7951;7952;7953 7952 4 6057000 5592000 0 0 12900000 13627000 0 0 HLQQPLCNIPEAR GIYSTTLRQLRHARRHLQQPLCNIPEARKL RRHLQQPLCNIPEARKLFLSILRHPGAVRR R H L A R K 1 1 1 0 1 2 1 0 1 1 2 0 0 0 2 0 0 0 0 0 0 0 13 0 1 3 1574.7987 P27249 P27249 406 418 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 3.4428E-08 96.745 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38836000 9926600 10717000 0 0 7385300 10807000 0 0 1824 320 1972 10434;10435;10436;10437 7954;7955;7956;7957 7954 4 9926600 10970000 0 0 8908900 11972000 0 0 HLSNALR PRLMRTLWRIHHRQKHLSNALRRFLDYCDP WRIHHRQKHLSNALRRFLDYCDPANVPR__ K H L L R R 1 1 1 0 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 0 1 809.45079 P0ACR4 P0ACR4 274 280 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 1.4167E-35 134.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 483960000 186170000 151820000 0 0 80382000 65591000 0 0 1825 218 1973 10438;10439;10440;10441 7958;7959;7960;7961 7961 3 186170000 155400000 0 0 96965000 72660000 0 0 HLVSPADALPGR ______________________________ DKKHLVSPADALPGRNTPMPVATLHAVNGH K H L G R N 2 1 0 1 0 0 0 1 1 0 2 0 0 0 2 1 0 0 0 1 0 0 12 0 0 4 1231.6673 P0A744 P0A744 8 19 msrA Peptide methionine sulfoxide reductase MsrA yes yes 2 9.7224E-07 90.629 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25367000 8098900 6491000 0 0 5634900 5141900 0 0 1826 94 1974 10442;10443;10444;10445 7962;7963;7964;7965 7962 4 8098900 6644200 0 0 6797400 5696100 0 0 HMNPELVNR SLENEPVLVNGWIDKHMNPELVNRMKQTIR NGWIDKHMNPELVNRMKQTIRARRKRHFNA K H M N R M 0 1 2 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 9 0 1 1 1108.5448 P0A8N0 P0A8N0 61 69 matP Macrodomain Ter protein yes yes 2 1.9339E-13 128.61 By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 101590000 29270000 29729000 0 0 22836000 19759000 0 0 1827 149 1975;1976 10446;10447;10448;10449;10450 7966;7967;7968;7969 7966 144 4 29270000 30431000 0 0 27547000 21889000 0 0 HMSGDIDNFPR RAPGSDQRTMMALRRHMSGDIDNFPRDVAE ALRRHMSGDIDNFPRDVAELVDWFDARDPN R H M P R D 0 1 1 2 0 0 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 11 0 0 1 1287.5666 P0ADV5 P0ADV5 127 137 yhbW Uncharacterized protein YhbW yes yes 2;3 1.5418E-64 202.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 1262700000 324110000 288790000 0 0 305290000 344490000 0 0 1828 226 1977;1978 10451;10452;10453;10454;10455;10456;10457;10458;10459;10460;10461;10462 7970;7971;7972;7973;7974;7975;7976;7977;7978;7979;7980;7981 7975 203 12 324110000 295610000 0 0 368270000 381620000 0 0 HMVHELVSNLR RHPLVMGNWKLNGSRHMVHELVSNLRKELA NGSRHMVHELVSNLRKELAGVAGCAVAIAP R H M L R K 0 1 1 0 0 0 1 0 2 0 2 0 1 0 0 1 0 0 0 2 0 0 11 0 1 0 1333.6925 P0A858 P0A858 17 27 tpiA Triosephosphate isomerase yes yes 3 0.00078536 60.598 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 75523000 14399000 25858000 0 0 17609000 17659000 0 0 1829 139 1979;1980 10463;10464;10465;10466;10467;10468;10469;10470 7982;7983;7984;7985;7986 7985 130 5 14399000 26468000 0 0 21242000 19562000 0 0 HMVHELVSNLRK RHPLVMGNWKLNGSRHMVHELVSNLRKELA GSRHMVHELVSNLRKELAGVAGCAVAIAPP R H M R K E 0 1 1 0 0 0 1 0 2 0 2 1 1 0 0 1 0 0 0 2 0 0 12 1 1 0 1461.7875 P0A858 P0A858 17 28 tpiA Triosephosphate isomerase yes yes 3;4 0.0012702 53.211 By MS/MS By MS/MS By matching 2 1 1 41716000 26198000 12095000 0 0 3423100 0 0 0 1830 139 1981 10471;10472;10473;10474 7987;7988;7989 7989 3 26198000 12380000 0 0 4129300 0 0 0 HNALLIFDEVQTGVGR ASNAFLQGLRELCNRHNALLIFDEVQTGVG NALLIFDEVQTGVGRTGELYAYMHYGVTPD R H N G R T 1 1 1 1 0 1 1 2 1 1 2 0 0 1 0 0 1 0 0 2 0 0 16 0 1 1 1767.9268 P77581 P77581 216 231 astC Succinylornithine transaminase yes yes 2;3 2.6477E-200 184.02 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 202130000 47950000 47152000 0 0 39427000 67599000 0 0 1831 437 1982 10475;10476;10477;10478;10479;10480;10481;10482 7990;7991;7992;7993;7994;7995;7996;7997;7998 7997 9 47950000 48265000 0 0 47560000 74885000 0 0 HNCTIPFENLDVLLPR AAAVNIDTLRALHLKHNCTIPFENLDVLLP NCTIPFENLDVLLPREIQLDNQSPEEKLVI K H N P R E 0 1 2 1 1 0 1 0 1 1 3 0 0 1 2 0 1 0 0 1 0 0 16 0 1 2 1936.9829 P77567 P77567 32 47 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 3 6.0855E-83 173.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 156080000 51871000 34757000 0 0 27535000 41912000 0 0 1832 436 1983 10483;10484;10485;10486 7999;8000;8001;8002 8002 4 51871000 35578000 0 0 33215000 46429000 0 0 HNDLENVGYTAR SRATTSQRCVRAGGKHNDLENVGYTARHHT GGKHNDLENVGYTARHHTFFEMLGNFSFGD K H N A R H 1 1 2 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 1 1 0 0 12 0 1 1 1387.648 P00957 P00957 75 86 alaS Alanine--tRNA ligase yes yes 2 0.022378 42.001 By MS/MS By matching By matching 1 1 1 14165000 5357300 4104600 0 0 4703200 0 0 0 1833 33 1984 10487;10488;10489 8003 8003 0 5357300 4201500 0 0 5673400 0 0 0 HNEEYEKIEGCDDGVIMHLK DSLSYHFWNSGVVIRHNEEYEKIEGCDDGV EKIEGCDDGVIMHLKSGKKLKADCLLYANG R H N L K S 0 0 1 2 1 0 4 2 2 2 1 2 1 0 0 0 0 0 1 1 0 0 20 1 4 0 2415.0835 P27306 P27306 236 255 sthA Soluble pyridine nucleotide transhydrogenase yes yes 4 2.0347E-06 65.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 63389000 24452000 20656000 0 0 6768000 11513000 0 0 1834 323 1985 10490;10491;10492;10493 8004;8005;8006 8004 3 24452000 21144000 0 0 8164200 12754000 0 0 HNGIIELVK ______________________________ MKQTQRHNGIIELVKQQGYVSTEELVEHFS R H N V K Q 0 0 1 0 0 0 1 1 1 2 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1 0 1021.592 P0ACL0 P0ACL0 7 15 glpR Glycerol-3-phosphate regulon repressor yes yes 2 2.4594E-47 156.46 By matching By matching By MS/MS By MS/MS 1 1 1 1 213500000 81940000 58338000 0 0 32089000 41133000 0 0 1835 215 1986 10494;10495;10496;10497 8007;8008 8008 1 81940000 59715000 0 0 38710000 45566000 0 0 HNHAAQQPQVLDI GRAMFRKLKVYAGNEHNHAAQQPQVLDI__ NEHNHAAQQPQVLDI_______________ E H N D I - 2 0 1 1 0 3 0 0 2 1 1 0 0 0 1 0 0 0 0 1 0 0 13 0 0 3 1469.7375 P0AA10 P0AA10 130 142 rplM 50S ribosomal protein L13 yes yes 3 9.6982E-08 75.819 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 82993000 0 6425700 12039000 12540000 0 0 22105000 29883000 1836 182 1987 10498;10499;10500;10501;10502;10503;10504 8009;8010;8011;8012;8013 8011 5 0 97993000 102300000 95071000 0 0 170120000 171500000 HNHATAPMTRAPAPE EVETVAAVEPEVTVEHNHATAPMTRAPAPE HNHATAPMTRAPAPEYVPEAPRHSDWQRPT E H N P E Y 4 1 1 0 0 0 1 0 2 0 0 0 1 0 3 0 2 0 0 0 0 0 15 1 0 7 1599.7576 P21513 P21513 1003 1017 rne Ribonuclease E yes yes 3 8.8717E-10 67.234 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 2 2 59260000 2833500 3523800 8682800 9643800 2406000 2515000 15756000 13900000 1837 297 1988;1989 10505;10506;10507;10508;10509;10510;10511;10512;10513;10514;10515;10516;10517;10518 8014;8015;8016;8017;8018;8019;8020 8017 253 6 43536000 53738000 73776000 73115000 37042000 38119000 121260000 79768000 HNLDASAIKGTGVGGRLTRE NNDALSPAIRRLLAEHNLDASAIKGTGVGG SAIKGTGVGGRLTREDVEKHLAKAPAKESA E H N R E D 2 2 1 1 0 0 1 4 1 1 2 1 0 0 0 1 2 0 0 1 0 0 20 3 0 2 2051.0872 P0AFG6 P0AFG6 125 144 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 4 1.6637E-16 85.974 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 91871000 2533000 2031300 16074000 21919000 0 550010 25672000 23092000 1838 247 1990 10519;10520;10521;10522;10523;10524;10525 8021;8022;8023;8024;8025 8022 5 38919000 30977000 136580000 166180000 0 8336200 197580000 132520000 HNLDASAIKGTGVGGRLTREDVE NNDALSPAIRRLLAEHNLDASAIKGTGVGG KGTGVGGRLTREDVEKHLAKAPAKESAPAA E H N V E K 2 2 1 2 0 0 2 4 1 1 2 1 0 0 0 1 2 0 0 2 0 0 23 3 1 2 2394.2251 P0AFG6 P0AFG6 125 147 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 4 2.5206E-24 91.729 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 88444000 2388100 3036800 15802000 23549000 0 1393000 14975000 27301000 1839 247 1991 10526;10527;10528;10529;10530;10531;10532 8026;8027 8027 2 36693000 46312000 134260000 178540000 0 21114000 115250000 156670000 HNLTTLK MVAGTLANFQHPTLKHNLTTLKALHHVAWM NFQHPTLKHNLTTLKALHHVAWMDDTLHVE K H N L K A 0 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 2 0 0 0 0 0 7 0 0 0 825.47085 P0AF08 P0AF08 31 37 mrp Protein mrp yes yes 2 0.015143 50.966 By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 24538000 0 0 4027200 4922400 4527600 0 4457300 6603600 1840 241 1992 10533;10534;10535;10536;10537 8028 8028 1 0 0 34218000 37320000 5461600 0 34304000 37897000 HNMALVTIEDLVAYR GTMARAPECIEFANKHNMALVTIEDLVAYR HNMALVTIEDLVAYRQAHERKAS_______ K H N Y R Q 2 1 1 1 0 0 1 0 1 1 2 0 1 0 0 0 1 0 1 2 0 0 15 0 1 2 1743.8978 P0A7J0 P0A7J0 195 209 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2;3 1.6044E-31 136.33 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 368500000 63232000 96993000 0 0 103520000 104760000 0 0 1841 105 1993;1994 10538;10539;10540;10541;10542;10543;10544;10545;10546;10547;10548;10549;10550 8029;8030;8031;8032;8033;8034;8035;8036;8037;8038;8039;8040 8034 112 12 63232000 99282000 0 0 124870000 116050000 0 0 HNMLGGCPK KLTQSMAIIRYIADKHNMLGGCPKERAEIS RYIADKHNMLGGCPKERAEISMLEGAVLDI K H N P K E 0 0 1 0 1 0 0 2 1 0 1 1 1 0 1 0 0 0 0 0 0 0 9 0 0 1 1012.4583 GST-Nek6 GST-Nek6 79 87 yes yes 2 3.2969E-20 143.61 By MS/MS By MS/MS 3 3 326220000 0 0 0 0 173440000 152780000 0 0 1842 23 1995;1996 10551;10552;10553;10554;10555;10556 8041;8042;8043;8044;8045;8046 8045 32 4 0 0 0 0 209220000 169250000 0 0 HPAGEPLK SRCIFTTVSPEKGQKHPAGEPLKTLQSFRT SPEKGQKHPAGEPLKTLQSFRTAQDNGDVD K H P L K T 1 0 0 0 0 0 1 1 1 0 1 1 0 0 2 0 0 0 0 0 0 0 8 0 1 3 847.4552 P75863 P75863 220 227 ycbX Uncharacterized protein YcbX yes yes 2 0.015816 60.788 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5810200 1866100 2346800 0 0 990990 606260 0 0 1843 411 1997 10557;10558;10559;10560 8047 8047 0 1866100 2402200 0 0 1195400 671600 0 0 HPAVPVDVVHR PEALVAGIADALEGKHPAVPVDVVHRALRE LEGKHPAVPVDVVHRALREIHERADAVRRQ K H P H R A 1 1 0 1 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 4 0 0 11 0 0 3 1224.6727 P0A9L3 P0A9L3 50 60 fklB FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase yes yes 3 0.010715 31.597 By MS/MS By MS/MS By matching 1 1 1 13705000 4842100 3526900 0 0 0 5336300 0 0 1844 170 1998 10561;10562;10563 8048;8049 8049 0 4842100 3610200 0 0 0 5911500 0 0 HPDTLLAAR PQLRGAYGTVIMDSRHPDTLLAARSGSPLV VIMDSRHPDTLLAARSGSPLVIGLGMGENF R H P A R S 2 1 0 1 0 0 0 0 1 0 2 0 0 0 1 0 1 0 0 0 0 0 9 0 0 3 992.54033 P17169 P17169 166 174 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 1.1553E-283 270.92 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 7475300000 1972600000 2230900000 0 0 1651200000 1620500000 0 0 1845 288 1999 10564;10565;10566;10567;10568;10569;10570 8050;8051;8052;8053 8053 3 2011200000 2283600000 0 0 2049700000 1822700000 0 0 HPEQCQHDHSVQVK AHGLCAACVEVEACRHPEQCQHDHSVQVKK RHPEQCQHDHSVQVKKKPR___________ R H P V K K 0 0 0 1 1 3 1 0 3 0 0 1 0 0 1 1 0 0 0 2 0 0 14 0 1 1 1727.7798 P0AC51 P0AC51 154 167 zur Zinc uptake regulation protein yes yes 3 0.0044653 38.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7964800 2170500 3304600 0 0 1373400 1116300 0 0 1846 204 2000 10571;10572;10573;10574 8054 8054 1 2170500 3382600 0 0 1656700 1236600 0 0 HPFPGPGLGVR KIGLELGLPYDMLYRHPFPGPGLGVRVLGE MLYRHPFPGPGLGVRVLGEVKKEYCDLLRR R H P V R V 0 1 0 0 0 0 0 3 1 0 1 0 0 1 3 0 0 0 0 1 0 0 11 0 0 3 1132.6142 P04079 P04079 401 411 guaA GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0024057 61.999 By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 15652000 0 898880 0 0 5310700 9442700 0 0 1847 44 2001 10575;10576;10577;10578;10579 8055;8056;8057 8057 3 0 13708000 0 0 6406300 43682000 0 0 HPLFVTNVDDTRLDDIAAWTYR DWQIAAILNIGQRAKHPLFVTNVDDTRLDD VDDTRLDDIAAWTYRAPVEDQARLGFAIAH K H P Y R A 2 2 1 4 0 0 0 0 1 1 2 0 0 1 1 0 3 1 1 2 0 0 22 1 0 3 2617.2925 P33602 P33602 427 448 nuoG NADH-quinone oxidoreductase subunit G yes yes 4 0.00069349 34.346 By MS/MS By MS/MS By MS/MS 1 1 1 13995000 3905900 0 0 0 5319300 4769900 0 0 1848 345 2002 10580;10581;10582 8058;8059;8060 8059 2 3905900 0 0 0 6416600 5284000 0 0 HPLVMGNWK ______________________________ ______________________________ R H P W K L 0 0 1 0 0 0 0 1 1 0 1 1 1 0 1 0 0 1 0 1 0 0 9 0 0 1 1080.5539 P0A858 P0A858 3 11 tpiA Triosephosphate isomerase yes yes 2 0.0024025 81.784 By MS/MS By matching By matching 1 1 1 21231000 0 6707300 0 0 5299300 9224600 0 0 1849 139 2003 10583;10584;10585 8061 8061 1 0 6865600 0 0 6392600 10219000 0 0 HPTALTTHEMLYR MNNHFKCIGIVGHPRHPTALTTHEMLYRWL PRHPTALTTHEMLYRWLCTKGYEVIVEQQI R H P Y R W 1 1 0 0 0 0 1 0 2 0 2 0 1 0 1 0 3 0 1 0 0 0 13 0 1 2 1568.7769 P0A7B3 P0A7B3 16 28 nadK NAD kinase yes yes 3 5.8566E-141 217.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 510720000 152070000 148630000 0 0 101720000 108300000 0 0 1850 99 2004;2005 10586;10587;10588;10589;10590;10591;10592 8062;8063;8064;8065;8066;8067;8068 8062 108 7 152070000 152140000 0 0 122700000 119970000 0 0 HPVTPWGVQTK VDHPHGGGEGRNFGKHPVTPWGVQTKGKKT NFGKHPVTPWGVQTKGKKTRSNKRTDKFIV K H P T K G 0 0 0 0 0 1 0 1 1 0 0 1 0 0 2 0 2 1 0 2 0 0 11 0 0 2 1248.6615 P60422 P60422 243 253 rplB 50S ribosomal protein L2 yes yes 2;3 7.4006E-203 265.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1769300000 485750000 459660000 0 0 339130000 484720000 0 0 1851 379 2006 10593;10594;10595;10596;10597;10598;10599;10600 8069;8070;8071;8072;8073;8074;8075 8071 7 485750000 470510000 0 0 409090000 536960000 0 0 HQFDMAK QPLSREKNSYICPQRHQFDMAKEGYVNLLP NSYICPQRHQFDMAKEGYVNLLPVQHKRSR R H Q A K E 1 0 0 1 0 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 7 0 0 1 875.39597 P36999 P36999 25 31 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 9.9973E-25 147.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 464490000 161190000 160430000 0 0 60744000 82126000 0 0 1852 352 2007 10601;10602;10603;10604 8076;8077;8078;8079 8077 4 161190000 164220000 0 0 73276000 90977000 0 0 HQKPVPALNQPGGIVEK SSGKVIVEGINLVKKHQKPVPALNQPGGIV KPVPALNQPGGIVEKEAAIQVSNVAIFNAA K H Q E K E 1 0 1 0 0 2 1 2 1 1 1 2 0 0 3 0 0 0 0 2 0 0 17 1 1 4 1811.0054 P60624 P60624 45 61 rplX 50S ribosomal protein L24 yes yes 3 0.0023542 38.412 By MS/MS By MS/MS By MS/MS 1 1 1 67496000 0 17767000 0 0 23939000 25790000 0 0 1853 381 2008 10605;10606;10607 8080;8081;8082 8080 3 0 18187000 0 0 28877000 28570000 0 0 HQLEHILNEEHIAHEPR CLQFHLKALDVEQIRHQLEHILNEEHIAHE LEHILNEEHIAHEPRALQLLARAAEGSLRD R H Q P R A 1 1 1 0 0 1 4 0 4 2 2 0 0 0 1 0 0 0 0 0 0 0 17 0 4 2 2101.0453 P06710 P06710 185 201 dnaX DNA polymerase III subunit tau yes yes 3;4;5 3.2615E-20 110.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 3 240790000 44736000 86992000 0 0 34139000 74927000 0 0 1854 51 2009 10608;10609;10610;10611;10612;10613;10614;10615;10616;10617;10618 8083;8084;8085;8086;8087;8088;8089;8090 8089 8 44736000 89045000 0 0 41182000 83002000 0 0 HQQHLAQLPK ______________________________ FKRNKHQQHLAQLPKISQSVDDVDFFYAPA K H Q P K I 1 0 0 0 0 3 0 0 2 0 2 1 0 0 1 0 0 0 0 0 0 0 10 0 0 2 1198.6571 P23830 P23830 10 19 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 3 0.00096543 60.398 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54649000 13313000 11772000 0 0 14679000 14885000 0 0 1855 304 2010 10619;10620;10621;10622 8091;8092;8093;8094;8095 8093 5 13313000 12049000 0 0 17708000 16489000 0 0 HQVALEINNSSFLHSR KYEIDVKAVAEAAAKHQVALEINNSSFLHS QVALEINNSSFLHSRKGSEDNCREVAAAVR K H Q S R K 1 1 2 0 0 1 1 0 2 1 2 0 0 1 0 3 0 0 0 1 0 0 16 0 1 1 1850.9387 P75914 P75914 151 166 ycdX Probable phosphatase YcdX yes yes 3 6.4619E-20 113.69 By MS/MS By MS/MS By MS/MS 1 1 1 54805000 19465000 20568000 0 0 14772000 0 0 0 1856 412 2011 10623;10624;10625 8096;8097;8098;8099;8100;8101;8102 8099 7 19465000 21053000 0 0 17820000 0 0 0 HRDLTALCK KPPRDITAEFLVKSKHRDLTALCKEYDELA FLVKSKHRDLTALCKEYDELAETQGKLEEK K H R C K E 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 0 1 0 0 0 0 0 9 1 0 1 1112.5761 LSD1-FL-His LSD1-FL-His 486 494 yes yes 2;3 8.6986E-48 170.5 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1161200000 335880000 350780000 0 0 230180000 244340000 0 0 1857 24 2012 10626;10627;10628;10629;10630;10631;10632;10633;10634 8103;8104;8105;8106;8107;8108;8109;8110 8104 8 335880000 366220000 0 0 277660000 270670000 0 0 HSFATHMLESSGDLR IKQGLNNHVHPHKLRHSFATHMLESSGDLR HSFATHMLESSGDLRGVQELLGHANLSTTQ R H S L R G 1 1 0 1 0 0 1 1 2 0 2 0 1 1 0 3 1 0 0 0 0 0 15 0 1 1 1686.7784 P0A8P6 P0A8P6 244 258 xerC Tyrosine recombinase XerC yes yes 3 2.177E-24 131.96 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 107220000 33618000 38185000 0 0 13940000 21476000 0 0 1858 150 2013;2014 10635;10636;10637;10638;10639;10640;10641;10642 8111;8112;8113;8114;8115;8116;8117 8114 145 6 33618000 39086000 0 0 16816000 23791000 0 0 HSFNALLK RFKVYLIDEVHMLSRHSFNALLKTLEEPPE EVHMLSRHSFNALLKTLEEPPEHVKFLLAT R H S L K T 1 0 1 0 0 0 0 0 1 0 2 1 0 1 0 1 0 0 0 0 0 0 8 0 0 1 928.51305 P06710 P06710 134 141 dnaX DNA polymerase III subunit tau yes yes 2 2.7948E-19 114.28 By MS/MS By MS/MS By MS/MS 1 1 1 58766000 23102000 0 0 0 17688000 17977000 0 0 1859 51 2015 10643;10644;10645 8118;8119 8119 0 23102000 0 0 0 21337000 19914000 0 0 HSPNQLAWHAR LHQIWSRCRANYFVRHSPNQLAWHARHLLQ YFVRHSPNQLAWHARHLLQHDLSKPLVLLS R H S A R H 2 1 1 0 0 1 0 0 2 0 1 0 0 0 1 1 0 1 0 0 0 0 11 0 0 3 1315.6534 P27249 P27249 675 685 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 5.9115E-52 163.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 114660000 31658000 31999000 0 0 22703000 28301000 0 0 1860 320 2016 10646;10647;10648;10649 8120;8121;8122;8123 8121 4 31658000 32755000 0 0 27387000 31351000 0 0 HSQSYMQSLPDFVR LGMVKQWQDMIYSGRHSQSYMQSLPDFVRL RHSQSYMQSLPDFVRLAEAYGHVGIQISHP R H S V R L 0 1 0 1 0 2 0 0 1 0 1 0 1 1 1 3 0 0 1 1 0 0 14 0 0 1 1693.7882 P00893 P00893 493 506 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2;3 2.5418E-39 174.9 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 174080000 54768000 42556000 0 0 37552000 39202000 0 0 1861 29 2017 10650;10651;10652;10653;10654;10655;10656;10657 8124;8125;8126;8127;8128;8129;8130;8131 8127 8 54768000 43561000 0 0 45300000 43427000 0 0 HSQVFSTAEDNQSAVTIHVLQGER VMTTLIAKNTTIPTKHSQVFSTAEDNQSAV DNQSAVTIHVLQGERKRAADNKSLGQFNLD K H S E R K 2 1 1 1 0 3 2 1 2 1 1 0 0 1 0 3 2 0 0 3 0 0 24 0 2 2 2652.2892 P0A6Y8 P0A6Y8 422 445 dnaK Chaperone protein DnaK yes yes 3;4 0 338.88 By MS/MS By matching By MS/MS By MS/MS 2 1 3 2 1542300000 410060000 140580000 0 0 479100000 512600000 0 0 1862 86 2018 10658;10659;10660;10661;10662;10663;10664;10665 8132;8133;8134;8135 8132 4 410060000 143900000 0 0 620440000 567840000 0 0 HSSLLGEMPQER LINNWLLHIRDIWFKHSSLLGEMPQERRLD WFKHSSLLGEMPQERRLDTLCELNVMEQVY K H S E R R 0 1 0 0 0 1 2 1 1 0 2 0 1 0 1 2 0 0 0 0 0 0 12 0 2 1 1382.6612 P61517 P61517 130 141 can Carbonic anhydrase 2 yes yes 2;3 6.9623E-36 178.46 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 1349200000 298220000 353940000 0 0 323350000 373730000 0 0 1863 386 2019;2020 10666;10667;10668;10669;10670;10671;10672;10673;10674;10675;10676;10677;10678;10679;10680;10681 8136;8137;8138;8139;8140;8141;8142;8143;8144;8145;8146;8147;8148;8149;8150;8151;8152 8146 306 17 298220000 362290000 0 0 390050000 414010000 0 0 HSVELDSQGR MAFGFRPHNMEWLAKHSVELDSQGRIIAPE EWLAKHSVELDSQGRIIAPEGSDNAFQTSN K H S G R I 0 1 0 1 0 1 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1 0 1126.5367 P09832 P09832 412 421 gltD Glutamate synthase [NADPH] small chain yes yes 2 0.00010618 98.033 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14911000 5669600 4511500 0 0 2635900 2094400 0 0 1864 65 2021 10682;10683;10684;10685 8153;8154;8155;8156;8157 8153 5 5669600 4618000 0 0 3179700 2320100 0 0 HSVSTPSLEASHHATSD LPEITNVFSPTLVRRHSVSTPSLEASHHAT VSTPSLEASHHATSD_______________ R H S S D - 2 0 0 1 0 0 1 0 3 0 1 0 0 0 1 5 2 0 0 1 0 0 17 0 1 3 1761.7918 P03024 P03024 327 343 galR HTH-type transcriptional regulator GalR yes yes 3 1.3653E-69 169.04 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 52606000 16426000 19966000 0 0 7051000 9162500 0 0 1865 42 2022 10686;10687;10688;10689 8158;8159;8160 8159 3 16426000 20438000 0 0 8505600 10150000 0 0 HTAIDGGTFQNEITDR VQALNLMSVLNPRIKHTAIDGGTFQNEITD TAIDGGTFQNEITDRNVMGVPAVFVNGKEF K H T D R N 1 1 1 2 0 1 1 2 1 2 0 0 0 1 0 0 3 0 0 0 0 0 16 0 1 1 1773.8282 P35340 P35340 151 166 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 0 422.13 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2251400000 608460000 462590000 0 0 547110000 633260000 0 0 1866 348 2023 10690;10691;10692;10693;10694;10695;10696;10697 8161;8162;8163;8164;8165;8166;8167;8168;8169 8166 9 608460000 473510000 0 0 659980000 701510000 0 0 HTEVHNFIYQTR PMTGLDKPVAAFLDRHTEVHNFIYQTRSYL LDRHTEVHNFIYQTRSYLELWLPMLETNNR R H T T R S 0 1 1 0 0 1 1 0 2 1 0 0 0 1 0 0 2 0 1 1 0 0 12 0 1 0 1543.7532 P0A894 P0A894 212 223 rapZ RNase adapter protein RapZ yes yes 2;3 7.0619E-36 128.36 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 243650000 92679000 61970000 0 0 40511000 48493000 0 0 1867 141 2024 10698;10699;10700;10701;10702;10703 8170;8171;8172;8173;8174;8175 8175 6 92679000 63433000 0 0 48868000 53719000 0 0 HTFDNFVEGK PAPAEPTYRSNVNVKHTFDNFVEGKSNQLA NVNVKHTFDNFVEGKSNQLARAAARQVADN K H T G K S 0 0 1 1 0 0 1 1 1 0 0 1 0 2 0 0 1 0 0 1 0 0 10 0 1 0 1192.5513 P03004 P03004 136 145 dnaA Chromosomal replication initiator protein DnaA yes yes 2 6.7706E-77 188.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38935000 9482400 10457000 0 0 7642100 11353000 0 0 1868 40 2025 10704;10705;10706;10707 8176;8177;8178;8179;8180 8176 5 9482400 10704000 0 0 9218600 12576000 0 0 HTGLLLQHFGINAR EVLQAVDLIAAEDTRHTGLLLQHFGINARL RHTGLLLQHFGINARLFALHDHNEQQKAET R H T A R L 1 1 1 0 0 1 0 2 2 1 3 0 0 1 0 0 1 0 0 0 0 0 14 0 0 1 1575.8634 P67087 P67087 48 61 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 3 2.6916E-52 162.49 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87540000 22952000 17142000 0 0 23283000 24163000 0 0 1869 400 2026 10708;10709;10710;10711 8181;8182;8183;8184 8182 4 22952000 17547000 0 0 28086000 26768000 0 0 HTHDDYQNYEYGYSVSDR EGLAHRGYTEGFLRRHTHDDYQNYEYGYSV DDYQNYEYGYSVSDRQQFVGEFTGERKGDL R H T D R Q 0 1 1 3 0 1 1 1 2 0 0 0 0 0 0 2 1 0 4 1 0 0 18 0 1 0 2247.9094 P76403 P76403 342 359 yegQ Uncharacterized protease YegQ yes yes 3 0.00017387 52.045 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32537000 9838500 5794300 0 0 6702900 10201000 0 0 1870 424 2027 10712;10713;10714;10715 8185;8186;8187;8188 8188 4 9838500 5931100 0 0 8085700 11301000 0 0 HTHHDMDVDKPGK IPALCARGIRPGLIKHTHHDMDVDKPGKDS IKHTHHDMDVDKPGKDSYELRKAGAAQTIV K H T G K D 0 0 0 3 0 0 0 1 3 0 0 2 1 0 1 0 1 0 0 1 0 0 13 1 0 1 1515.6889 P32125 P32125 43 55 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 3;4 5.5857E-06 54.343 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 74501000 16284000 30299000 0 0 18405000 9513700 0 0 1871 337 2028 10716;10717;10718;10719;10720;10721;10722 8189;8190;8191;8192;8193;8194 8190 6 16284000 31014000 0 0 22201000 10539000 0 0 HTIRNYPATVHGALLSGLRE PGAPQPIPRLFFAGEHTIRNYPATVHGALL YPATVHGALLSGLREAGRIADQFLGAMYTL E H T R E A 2 2 1 0 0 0 1 2 2 1 3 0 0 0 1 1 2 0 1 1 0 0 20 2 0 3 2204.1814 LSD1-FL-His LSD1-FL-His 804 823 yes yes 3;4 3.1212E-47 132.01 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 3 2 3 3 3 2928200000 148660000 214130000 291220000 405910000 415940000 429600000 403760000 619020000 1872 24 2029 10723;10724;10725;10726;10727;10728;10729;10730;10731;10732;10733;10734;10735;10736;10737;10738;10739;10740;10741;10742;10743;10744 8195;8196;8197;8198;8199;8200;8201;8202;8203;8204;8205;8206;8207;8208;8209;8210;8211;8212;8213;8214;8215;8216;8217;8218;8219 8204 25 2284100000 3265400000 2474500000 3077400000 6403700000 6511200000 3107400000 3552500000 HTMIHEQITR PTQEQYDEFKTTVTRHTMIHEQITRLFHAF TTVTRHTMIHEQITRLFHAFRRDSHPMAVM R H T T R L 0 1 0 0 0 1 1 0 2 2 0 0 1 0 0 0 2 0 0 0 0 0 10 0 1 0 1264.6346 P0ABH7 P0ABH7 111 120 gltA Citrate synthase yes yes 3 4.4259E-26 133.89 By MS/MS By MS/MS By MS/MS 1 1 1 24949000 24949000 0 0 0 0 0 0 0 1873 200 2030 10745;10746;10747 8220;8221;8222 8222 3 24949000 0 0 0 0 0 0 0 HTNWADTVQEAK TGCTLSAALAALRPRHTNWADTVQEAKSWL RPRHTNWADTVQEAKSWLSSALAQADTLEV R H T A K S 2 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 2 1 0 1 0 0 12 0 1 2 1398.6528 P76422 P76422 226 237 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2;3 0 304.57 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 508820000 134990000 158130000 0 0 104200000 111500000 0 0 1874 425 2031 10748;10749;10750;10751;10752;10753;10754;10755 8223;8224;8225;8226;8227 8223 5 134990000 161860000 0 0 125700000 123520000 0 0 HVDPVKEP ESRLPGILELSRTFAHVDPVKEPIPVIPTC ELSRTFAHVDPVKEPIPVIPTCHYMMGGIP A H V E P I 0 0 0 1 0 0 1 0 1 0 0 1 0 0 2 0 0 0 0 2 0 0 8 1 1 1 919.47633 P0AC41 P0AC41 339 346 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.005772 94.407 By MS/MS By MS/MS By MS/MS 1 1 1 24555000 5325600 4983300 0 0 0 14246000 0 0 1875 203 2032 10756;10757;10758 8228;8229;8230 8228 3 32148000 29825000 0 0 0 20308000 0 0 HVDSLITIPNDK KRMAFAEQGITELSKHVDSLITIPNDKLLK LSKHVDSLITIPNDKLLKVLGRGISLLDAF K H V D K L 0 0 1 2 0 0 0 0 1 2 1 1 0 0 1 1 1 0 0 1 0 0 12 0 0 1 1350.7143 P0A9A6 P0A9A6 156 167 ftsZ Cell division protein FtsZ yes yes 2 1.001E-09 112.75 By MS/MS By MS/MS 1 1 11826000 0 0 0 0 11826000 0 0 0 1876 161 2033 10759;10760 8231;8232 8232 2 0 0 0 0 14265000 0 0 0 HVEEVIAP AGFVSSDNMHIIEMPHVEEVIAPIFYTVPL MHIIEMPHVEEVIAPIFYTVPLQLLAYHVA P H V A P I 1 0 0 0 0 0 2 0 1 1 0 0 0 0 1 0 0 0 0 2 0 0 8 0 2 1 892.46543 P17169 P17169 567 574 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 1.9233E-19 142.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1085900000 121900000 150360000 0 0 397510000 416160000 0 0 1877 288 2034 10761;10762;10763;10764;10765 8233;8234;8235;8236 8236 4 735870000 899910000 0 0 565940000 593240000 0 0 HVGVAPADAANALGSFINAR EHNMHNGLMAIAAARHVGVAPADAANALGS PADAANALGSFINARRRLELRGEANGVTVY R H V A R R 6 1 2 1 0 0 0 2 1 1 1 0 0 1 1 1 0 0 0 2 0 0 20 0 0 7 1950.0072 P37773 P37773 293 312 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2;3 7.8982E-77 109.24 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 207670000 45292000 60030000 0 0 40173000 62172000 0 0 1878 360 2035 10766;10767;10768;10769;10770;10771;10772;10773;10774 8237;8238;8239;8240;8241;8242;8243;8244;8245 8238 9 45292000 61447000 0 0 48461000 68873000 0 0 HVKDEQIEHWK SLGQALEVVIQLQEKHVKDEQIEHWKKIVK LQEKHVKDEQIEHWKKIVKTQEELKELLNK K H V W K K 0 0 0 1 0 1 2 0 2 1 0 2 0 0 0 0 0 1 0 1 0 0 11 1 2 0 1447.7208 LSD1-FL-His LSD1-FL-His 424 434 yes yes 2;3;4 3.9493E-155 236.77 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 14 14 1 13 9 1 2 14212000000 1727000000 3520900000 7312200 0 3996900000 4922100000 12768000 24885000 1879 24 2036 10775;10776;10777;10778;10779;10780;10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791;10792;10793;10794;10795;10796;10797;10798;10799;10800;10801;10802;10803;10804;10805;10806;10807;10808;10809;10810;10811;10812;10813;10814;10815;10816;10817;10818;10819;10820;10821;10822;10823;10824;10825;10826;10827;10828 8246;8247;8248;8249;8250;8251;8252;8253;8254;8255;8256;8257;8258;8259;8260;8261;8262;8263;8264;8265;8266;8267;8268;8269;8270;8271;8272;8273;8274;8275;8276;8277;8278;8279;8280;8281;8282;8283;8284;8285;8286;8287;8288;8289 8248 41 4535600000 5345300000 62131000 0 7187700000 6672400000 98266000 142810000 HVKDEQIEHWKK SLGQALEVVIQLQEKHVKDEQIEHWKKIVK QEKHVKDEQIEHWKKIVKTQEELKELLNKM K H V K K I 0 0 0 1 0 1 2 0 2 1 0 3 0 0 0 0 0 1 0 1 0 0 12 2 2 0 1575.8158 LSD1-FL-His LSD1-FL-His 424 435 yes yes 2;3;4 1.9914E-193 222.79 By MS/MS By MS/MS By MS/MS By MS/MS 9 7 6 6 3725000000 546260000 1871400000 0 0 575100000 732290000 0 0 1880 24 2037 10829;10830;10831;10832;10833;10834;10835;10836;10837;10838;10839;10840;10841;10842;10843;10844;10845;10846;10847;10848;10849;10850;10851;10852;10853;10854;10855;10856 8290;8291;8292;8293;8294;8295;8296;8297;8298;8299;8300;8301;8302;8303;8304;8305;8306;8307;8308;8309;8310;8311;8312;8313;8314;8315;8316;8317;8318;8319;8320 8298 31 727980000 2270900000 0 0 785410000 850200000 0 0 HVLTMLNE ______________________________ ______________________________ E H V N E H 0 0 1 0 0 0 1 0 1 0 2 0 1 0 0 0 1 0 0 1 0 0 8 0 0 0 955.4797 P0A9C5 P0A9C5 5 12 glnA Glutamine synthetase yes yes 2 0.004267 75.311 By MS/MS By MS/MS By MS/MS 1 1 1 5172000 0 3153000 0 2019100 0 0 0 0 1881 164 2038 10857;10858;10859 8321;8322;8323 8321 3 0 48083000 0 15308000 0 0 0 0 HVLTMLNEHE ______________________________ ______________________________ E H V H E V 0 0 1 0 0 0 2 0 2 0 2 0 1 0 0 0 1 0 0 1 0 0 10 0 1 0 1221.5812 P0A9C5 P0A9C5 5 14 glnA Glutamine synthetase yes yes 2 0.015715 60.91 By matching By MS/MS By MS/MS 1 1 1 7158400 0 0 3197800 0 2220300 1740200 0 0 1882 164 2039 10860;10861;10862 8324 8324 0 0 0 27171000 0 34184000 26376000 0 0 HVMLVVDHSK YHEVRTKRAIIENSRHVMLVVDHSKFGRNA IENSRHVMLVVDHSKFGRNAMVNMGSISMV R H V S K F 0 0 0 1 0 0 0 0 2 0 1 1 1 0 0 1 0 0 0 3 0 0 10 0 0 0 1163.6121 P0ACL0 P0ACL0 201 210 glpR Glycerol-3-phosphate regulon repressor yes yes 2;3 7.8644E-06 105.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 1013100000 322160000 356230000 0 0 174100000 160650000 0 0 1883 215 2040;2041 10863;10864;10865;10866;10867;10868;10869;10870;10871;10872;10873;10874;10875 8325;8326;8327;8328;8329;8330;8331;8332;8333;8334 8333 196 10 322160000 364640000 0 0 216500000 177970000 0 0 HVQVAEMVIEK KGEVVASTFDEPASRHVQVAEMVIEKAKRL PASRHVQVAEMVIEKAKRLVEHKKDVIILL R H V E K A 1 0 0 0 0 1 2 0 1 1 0 1 1 0 0 0 0 0 0 3 0 0 11 0 2 1 1281.6751 P0AG30 P0AG30 239 249 rho Transcription termination factor Rho yes yes 2 1.5906E-11 121.83 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17887000 0 5655300 0 0 4648600 7583200 0 0 1884 256 2042 10876;10877;10878;10879 8335;8336;8337;8338 8338 3 0 5788800 0 0 5607600 8400500 0 0 HVSEHIVVVHNGIIENHEP RWATHGEPSEVNAHPHVSEHIVVVHNGIIE HIVVVHNGIIENHEPLREELKARGYTFVSE P H V E P L 0 0 2 0 0 0 3 1 4 3 0 0 0 0 1 1 0 0 0 4 0 0 19 0 3 0 2158.0919 P17169 P17169 89 107 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 8.7064E-59 145.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 317810000 5120400 8709600 0 0 185220000 118760000 0 0 1885 288 2043 10880;10881;10882;10883;10884;10885;10886 8339;8340;8341;8342;8343;8344;8345 8345 7 30910000 52127000 0 0 263700000 169300000 0 0 HVVLAIAK GIDTGAIGRNGSKEKHVVLAIAKNVRSILR RNGSKEKHVVLAIAKNVRSILRNHGIDARL K H V A K N 2 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 0 2 849.54362 P36548;Q1PH25 P36548 82 89 amiA N-acetylmuramoyl-L-alanine amidase AmiA yes no 2 2.7315E-25 149.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33450000 10814000 9162900 0 0 6494700 6978900 0 0 1886 349 2044 10887;10888;10889;10890 8346;8347;8348;8349 8347 4 10814000 9379200 0 0 7834600 7731100 0 0 HVVNYELP ATDIAARGLDIEELPHVVNYELPNVPEDYV LDIEELPHVVNYELPNVPEDYVHRIGRTGR P H V L P N 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 1 2 0 0 8 0 1 0 969.49198 P25888 P25888 316 323 rhlE ATP-dependent RNA helicase RhlE yes yes 2 0.00011334 117.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 94277000 7287100 5727100 0 0 49617000 31645000 0 0 1887 318 2045 10891;10892;10893;10894 8350;8351;8352;8353;8354 8353 5 43989000 34277000 0 0 70639000 45110000 0 0 HWDQDDDFEFTGSHLTVR LEFANATPLSTLSLKHWDQDDDFEFTGSHL QDDDFEFTGSHLTVRNGYSCVPVALAEGLD K H W V R N 0 1 0 4 0 1 1 1 2 0 1 0 0 2 0 1 2 1 0 1 0 0 18 0 1 0 2203.9559 LSD1-FL-His LSD1-FL-His 553 570 yes yes 2;3;4 0 366.95 By MS/MS By MS/MS By MS/MS By MS/MS 11 5 5 6 28719000000 443350000 14057000000 0 0 6421000000 7798000000 0 0 1888 24 2046 10895;10896;10897;10898;10899;10900;10901;10902;10903;10904;10905;10906;10907;10908;10909;10910;10911;10912;10913;10914;10915;10916;10917;10918;10919;10920;10921 8355;8356;8357;8358;8359;8360;8361;8362;8363;8364;8365;8366;8367;8368;8369;8370;8371;8372;8373;8374;8375;8376;8377;8378;8379;8380;8381;8382;8383;8384;8385;8386;8387;8388;8389;8390;8391;8392;8393;8394;8395;8396;8397;8398;8399;8400;8401;8402;8403;8404;8405 8355 51 2873000000 15507000000 0 0 11878000000 9744100000 0 0 HWKIEYTESTSA PQPFQQCSKFLNRYPHWKIEYTESTSAAME RYPHWKIEYTESTSAAMEKVAQAKSPHVAA P H W S A A 1 0 0 0 0 0 2 0 1 1 0 1 0 0 0 2 2 1 1 0 0 0 12 1 2 0 1450.6729 P0A9J8 P0A9J8 225 236 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 3 0.020762 21.759 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10776000 711420 830040 0 0 4485900 4748200 0 0 1889 166 2047 10922;10923;10924;10925 8406 8406 1 4294500 4967800 0 0 6386500 6768600 0 0 HWKKIVKTQE VIQLQEKHVKDEQIEHWKKIVKTQEELKEL DEQIEHWKKIVKTQEELKELLNKMVNLKEK E H W Q E E 0 0 0 0 0 1 1 0 1 1 0 3 0 0 0 0 1 1 0 1 0 0 10 3 0 0 1295.735 LSD1-FL-His LSD1-FL-His 432 441 yes yes 2;3 4.2165E-48 166.69 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 349830000 78412000 104780000 44012000 47143000 3475000 9019400 31084000 31902000 1890 24 2048 10926;10927;10928;10929;10930;10931;10932;10933;10934 8407;8408;8409;8410;8411;8412 8408 5 1204800000 1597900000 373960000 357420000 53500000 136700000 239230000 183080000 HWKKIVKTQEE VIQLQEKHVKDEQIEHWKKIVKTQEELKEL EQIEHWKKIVKTQEELKELLNKMVNLKEKI E H W E E L 0 0 0 0 0 1 2 0 1 1 0 3 0 0 0 0 1 1 0 1 0 0 11 3 1 0 1424.7776 LSD1-FL-His LSD1-FL-His 432 442 yes yes 2;3;4 2.3103E-131 219.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 8 10 9 5 4 7 7 4141400000 455320000 859030000 721920000 1024200000 73037000 128670000 757620000 121600000 1891 24 2049 10935;10936;10937;10938;10939;10940;10941;10942;10943;10944;10945;10946;10947;10948;10949;10950;10951;10952;10953;10954;10955;10956;10957;10958;10959;10960;10961;10962;10963;10964;10965;10966;10967;10968;10969;10970;10971;10972;10973;10974;10975;10976;10977;10978;10979;10980;10981;10982;10983;10984;10985;10986;10987;10988;10989;10990;10991;10992 8413;8414;8415;8416;8417;8418;8419;8420;8421;8422;8423;8424;8425;8426;8427;8428;8429;8430;8431;8432;8433;8434;8435;8436;8437;8438;8439;8440;8441;8442;8443;8444;8445;8446;8447;8448;8449;8450;8451;8452;8453;8454;8455;8456;8457;8458;8459;8460;8461;8462 8424 46 6954400000 13089000000 6134100000 7765100000 1124500000 1950300000 5830800000 697830000 HWKKIVKTQEELKE VIQLQEKHVKDEQIEHWKKIVKTQEELKEL EHWKKIVKTQEELKELLNKMVNLKEKIKEL E H W K E L 0 0 0 0 0 1 3 0 1 1 1 4 0 0 0 0 1 1 0 1 0 0 14 4 2 0 1794.9992 LSD1-FL-His LSD1-FL-His 432 445 yes yes 4 9.677E-05 63.091 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 95771000 7449900 9795100 9225200 19914000 9415700 13238000 9995700 16736000 1892 24 2050 10993;10994;10995;10996;10997;10998;10999;11000 8463;8464;8465;8466;8467;8468;8469;8470 8464 8 114460000 149380000 78385000 150980000 144960000 200650000 76929000 96048000 HYAHVDCPGHADYVK ITINTSHVEYDTPTRHYAHVDCPGHADYVK HYAHVDCPGHADYVKNMITGAAQMDGAILV R H Y V K N 2 0 0 2 1 0 0 1 3 0 0 1 0 0 1 0 0 0 2 2 0 0 15 0 0 3 1767.7787 P0CE48;P0CE47 P0CE48 76 90 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3;4 9.6377E-41 147.39 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 3 2 1 1 2 2 1 279620000 85194000 73229000 2670700 1564600 47372000 68106000 1479600 0 1893 269 2051 11001;11002;11003;11004;11005;11006;11007;11008;11009;11010;11011;11012 8471;8472;8473;8474;8475;8476 8472 5 102790000 74957000 22692000 11862000 57145000 75447000 11388000 0 HYAVLAGIDSEK RAQQMTRQTFWHRIKHYAVLAGIDSEKLSP RIKHYAVLAGIDSEKLSPHVLRHAFATHLL K H Y E K L 2 0 0 1 0 0 1 1 1 1 1 1 0 0 0 1 0 0 1 1 0 0 12 0 1 2 1301.6616 P0A8P8 P0A8P8 229 240 xerD Tyrosine recombinase XerD yes yes 2;3 6.1626E-184 280.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 388550000 101490000 106280000 0 0 91264000 89515000 0 0 1894 151 2052 11013;11014;11015;11016;11017;11018;11019;11020 8477;8478;8479;8480;8481;8482;8483;8484 8484 8 101490000 108790000 0 0 110090000 99163000 0 0 HYDHAVSPMDVALDIGPGLAK ______________________________ SPMDVALDIGPGLAKACIAGRVNGELVDAC R H Y A K A 3 0 0 3 0 0 0 2 2 1 2 1 1 0 2 1 0 0 1 2 0 0 21 0 0 5 2205.0888 P0A8M3 P0A8M3 13 33 thrS Threonine--tRNA ligase yes yes 3;4 4.7373E-14 80.975 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 196300000 54478000 26024000 0 0 42223000 73575000 0 0 1895 147 2053 11021;11022;11023;11024;11025;11026;11027 8485;8486;8487;8488;8489;8490;8491 8491 7 54478000 26638000 0 0 50933000 81504000 0 0 HYMALYPDAWLSGQR RRGEQPLLAPLMRIKHYMALYPDAWLSGQR HYMALYPDAWLSGQRYFELWPRVINLRHSG K H Y Q R Y 2 1 0 1 0 1 0 1 1 0 2 0 1 0 1 1 0 1 2 0 0 0 15 0 0 3 1806.8512 P24252 P24252 138 152 ybgA Uncharacterized protein YbgA yes yes 3 5.9641E-12 93.823 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 82016000 22273000 19367000 0 0 19549000 20826000 0 0 1896 313 2054;2055 11028;11029;11030;11031;11032;11033;11034 8492;8493;8494;8495;8496;8497 8492 260 6 22273000 19824000 0 0 23582000 23071000 0 0 IAAITLKMDE VETAGFNAKTDALLEIAAITLKMDEQGWLM DALLEIAAITLKMDEQGWLMPDTTLHFHVE E I A D E Q 2 0 0 1 0 0 1 0 0 2 1 1 1 0 0 0 1 0 0 0 0 0 10 1 0 2 1103.5896 P30014 P30014 39 48 rnt Ribonuclease T yes yes 2 0.010133 49.715 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 1 1 1 35660000 5200200 5399600 4674100 5270300 4351500 6270700 539230 3954600 1897 330 2056;2057 11035;11036;11037;11038;11039;11040;11041;11042;11043 8498;8499;8500;8501;8502;8503 8503 6 79899000 82345000 39715000 39957000 66995000 95042000 4150000 22695000 IAAKAAAVANQGKAK NFKPLKRYYLGNADEIAAKAAAVANQGKAK IAAKAAAVANQGKAK_______________ E I A A K - 7 0 1 0 0 1 0 1 0 1 0 3 0 0 0 0 0 0 0 1 0 0 15 2 0 7 1410.8307 P62707 P62707 236 250 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase yes yes 3 1.0569E-38 147.26 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 70120000 4636200 5340900 10673000 10148000 1612500 2222300 15080000 20406000 1898 390 2058 11044;11045;11046;11047;11048;11049;11050;11051 8504;8505;8506;8507;8508;8509 8507 6 71234000 81450000 90690000 76940000 24826000 33682000 116060000 117110000 IAAKHGIRLTNHSLYLYGHCAE VIEFSDDSIEARQREIAAKHGIRLTNHSLY RLTNHSLYLYGHCAEGDCREDEHAHEGK__ E I A A E G 3 1 1 0 1 0 1 2 3 2 3 1 0 0 0 1 1 0 2 0 0 0 22 2 0 3 2523.2805 P0A9A9 P0A9A9 114 135 fur Ferric uptake regulation protein yes yes 5 0.00077134 27.72 By MS/MS By MS/MS 1 1 20124000 0 0 0 0 12121000 8003100 0 0 1899 162 2059 11052;11053 8510;8511 8510 2 0 0 0 0 186620000 121300000 0 0 IAALMDKPVK ATLAIVPGDPDRVEKIAALMDKPVKLASHR DRVEKIAALMDKPVKLASHREFTTWRAELD K I A V K L 2 0 0 1 0 0 0 0 0 1 1 2 1 0 1 0 0 0 0 1 0 0 10 1 0 3 1084.6315 P12758 P12758 34 43 udp Uridine phosphorylase yes yes 2 0.00051745 39.547 By MS/MS 1 0 0 0 0 0 0 0 0 0 1900 278 2060 11054 8512 8512 1 0 0 0 0 0 0 0 0 IAAQALVK IGYPSLASAAYDQGRIAAQALVKGEATAHL AAYDQGRIAAQALVKGEATAHLIEDIPTGI R I A V K G 3 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 0 3 812.51199 P27306 P27306 328 335 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 3.3316E-25 148.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 173650000 52670000 49739000 0 0 34071000 37167000 0 0 1901 323 2061 11055;11056;11057;11058 8513;8514;8515;8516 8514 4 52670000 50913000 0 0 41100000 41172000 0 0 IAAVVLQVDAERE VAGEEAVREYKKGDEIAAVVLQVDAERERI DEIAAVVLQVDAERERISLGVKQLAEDPFN E I A R E R 3 1 0 1 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 3 0 0 13 1 1 3 1411.7671 P0AG67 P0AG67 415 427 rpsA 30S ribosomal protein S1 yes yes 2 5.8039E-15 121.83 By MS/MS By MS/MS 1 1 9341900 0 0 0 0 5088100 4253800 0 0 1902 261 2062 11059;11060 8517;8518 8517 2 0 0 0 0 78336000 64473000 0 0 IADDQNSLR KGSENYALTTNQGVRIADDQNSLRAGSRGP TNQGVRIADDQNSLRAGSRGPTLLEDFILR R I A L R A 1 1 1 2 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 9 0 0 1 1030.5043 P21179 P21179 88 96 katE Catalase HPII yes yes 2 8.3546E-76 189.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 236710000 80041000 77433000 0 0 41844000 37390000 0 0 1903 293 2063 11061;11062;11063;11064;11065;11066 8519;8520;8521;8522;8523;8524;8525;8526 8525 7 80041000 79261000 0 0 50477000 41419000 0 0 IADETLALMR RVARFAARYAHLGFRIADETLALMREMTHA HLGFRIADETLALMREMTHAGELEHLTPER R I A M R E 2 1 0 1 0 0 1 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 10 0 1 2 1131.5958 P06961 P06961 152 161 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 2 0.0032963 45.368 By MS/MS 1 0 0 0 0 0 0 0 0 0 1904 54 2064 11067 8527 8527 1 0 0 0 0 0 0 0 0 IADIYANCGITK KLVDEKHGQVVSVGKIADIYANCGITKKVK VGKIADIYANCGITKKVKATGLDALFDATI K I A T K K 2 0 1 1 1 0 0 1 0 3 0 1 0 0 0 0 1 0 1 0 0 0 12 0 0 2 1337.6649 P0A6K6 P0A6K6 260 271 deoB Phosphopentomutase yes yes 2 2.1081E-06 81.017 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31988000 4706400 8598800 0 0 8040900 10642000 0 0 1905 75 2065 11068;11069;11070;11071 8528;8529;8530 8530 3 4706400 8801700 0 0 9699700 11789000 0 0 IADQFLGAMYTLPR TVHGALLSGLREAGRIADQFLGAMYTLPRQ RIADQFLGAMYTLPRQATPGVPAQQSPSMY R I A P R Q 2 1 0 1 0 1 0 1 0 1 2 0 1 1 1 0 1 0 1 0 0 0 14 0 0 3 1594.8177 LSD1-FL-His LSD1-FL-His 827 840 yes yes 2;3 7.3391E-126 204.49 By MS/MS By MS/MS By MS/MS By MS/MS 8 9 10 7 52611000000 22597000000 11263000000 0 0 7764300000 10987000000 0 0 1906 24 2066;2067 11072;11073;11074;11075;11076;11077;11078;11079;11080;11081;11082;11083;11084;11085;11086;11087;11088;11089;11090;11091;11092;11093;11094;11095;11096;11097;11098;11099;11100;11101;11102;11103;11104;11105 8531;8532;8533;8534;8535;8536;8537;8538;8539;8540;8541;8542;8543;8544;8545;8546;8547;8548;8549;8550;8551;8552;8553;8554;8555;8556;8557;8558;8559;8560;8561;8562 8542 38 31 22633000000 11541000000 0 0 9460400000 12171000000 0 0 IAEAAWQVNESTENIGAR TEGVNIEFTDSGIKRIAEAAWQVNESTENI AAWQVNESTENIGARRLHTVLERLMEEISY R I A A R R 4 1 2 0 0 1 3 1 0 2 0 0 0 0 0 1 1 1 0 1 0 0 18 0 3 4 1957.9494 P0A6H5 P0A6H5 376 393 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 2.4322E-52 148.68 By MS/MS By MS/MS By MS/MS 1 1 1 22582000 7398300 7159100 0 0 8024400 0 0 0 1907 71 2068 11106;11107;11108 8563;8564;8565 8564 2 7398300 7328000 0 0 9679800 0 0 0 IAEVRPQVSGIILK LQITTELPGRTSAYRIAEVRPQVSGIILKR RIAEVRPQVSGIILKRNFKEGSDIEAGVSL R I A L K R 1 1 0 0 0 1 1 1 0 3 1 1 0 0 1 1 0 0 0 2 0 0 14 1 1 2 1521.9243 P0AE06 P0AE06 65 78 acrA Multidrug efflux pump subunit AcrA yes yes 3 9.0838E-05 67.964 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57879000 12610000 10494000 0 0 14464000 20311000 0 0 1908 232 2069 11109;11110;11111;11112 8566;8567;8568;8569;8570;8571;8572;8573 8567 8 12610000 10742000 0 0 17448000 22500000 0 0 IAFLGPK LLQQHLNKINPHSARIAFLGPKGSYSHLAA KINPHSARIAFLGPKGSYSHLAARQYAARH R I A P K G 1 0 0 0 0 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 7 0 0 2 744.45341 P0A9J8 P0A9J8 106 112 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.0024349 80.377 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1111900000 314360000 280070000 0 0 210300000 307200000 0 0 1909 166 2070 11113;11114;11115;11116 8574;8575;8576;8577 8574 4 314360000 286680000 0 0 253680000 340310000 0 0 IAGINIPDHK ______________________________ ______________________________ R I A H K H 1 0 1 1 0 0 0 1 1 3 0 1 0 0 1 0 0 0 0 0 0 0 10 0 0 2 1076.5978 P0A7S9 P0A7S9 4 13 rpsM 30S ribosomal protein S13 yes yes 2;3 2.3046E-07 106.68 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 218580000 56587000 54631000 0 0 58026000 49334000 0 0 1910 123 2071 11117;11118;11119;11120;11121;11122 8578;8579;8580;8581;8582;8583 8581 6 56587000 55921000 0 0 69998000 54651000 0 0 IAGIQAAK IDGRHHKGDVFATARIAGIQAAKRTWDLIP DVFATARIAGIQAAKRTWDLIPLCHPLMLS R I A A K R 3 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 8 0 0 3 770.46504 P0A738 P0A738 60 67 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 4.3153E-05 111.81 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 114360000 30023000 29359000 0 0 28815000 26165000 0 0 1911 93 2072 11123;11124;11125;11126;11127;11128;11129 8584;8585;8586;8587 8584 4 67025000 62750000 0 0 52334000 28985000 0 0 IAGLDVGADDYLVKPFALEELHAR LPVLILTARDTLTDKIAGLDVGADDYLVKP DYLVKPFALEELHARIRALLRRHNNQGESE K I A A R I 4 1 0 3 0 0 2 2 1 1 4 1 0 1 1 0 0 0 1 2 0 0 24 1 2 5 2611.3646 P30843 P30843 88 111 basR Transcriptional regulatory protein BasR yes yes 4 0.023535 10.543 By matching By matching By MS/MS 1 1 1 31192000 5558000 8717100 0 0 0 16917000 0 0 1912 333 2073 11130;11131;11132 8588 8588 1 5558000 8922900 0 0 0 18740000 0 0 IAGLEVK YFNDAQRQATKDAGRIAGLEVKRIINEPTA QATKDAGRIAGLEVKRIINEPTAAALAYGL R I A V K R 1 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 1 1 728.44324 P0A6Y8 P0A6Y8 160 166 dnaK Chaperone protein DnaK yes yes 2 4.2802E-05 97.071 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 1006500000 313020000 0 0 0 352770000 333010000 7688300 0 1913 86 2074 11133;11134;11135;11136;11137;11138;11139 8589;8590;8591;8592 8590 4 315270000 0 0 0 426210000 368900000 59171000 0 IAGLEVKR YFNDAQRQATKDAGRIAGLEVKRIINEPTA ATKDAGRIAGLEVKRIINEPTAAALAYGLD R I A K R I 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 1 1 1 884.54435 P0A6Y8 P0A6Y8 160 167 dnaK Chaperone protein DnaK yes yes 2 1.8032E-07 120.65 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 1 54397000 13299000 14769000 4040000 4970500 1164000 3405500 4676400 8072400 1914 86 2075 11140;11141;11142;11143;11144;11145;11146;11147;11148 8593;8594;8595 8593 3 13299000 35090000 34327000 37684000 17920000 3772600 35991000 46326000 IAGVPVLFE HEMSSGKDTPSGHWEIAGVPVLFEWGYFSD PSGHWEIAGVPVLFEWGYFSDHENSFPQEL E I A F E W 1 0 0 0 0 0 1 1 0 1 1 0 0 1 1 0 0 0 0 2 0 0 9 0 0 2 943.53787 P0A6K6 P0A6K6 105 113 deoB Phosphopentomutase yes yes 1 0.013627 54.787 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 55934000 15023000 11576000 0 0 9615100 12906000 3334700 3478600 1915 75 2076 11149;11150;11151;11152;11153;11154 8596;8597 8596 2 230830000 176530000 0 0 148030000 195610000 25664000 19963000 IAHWVGQGATISDR IASEKEEGTRLDLDRIAHWVGQGATISDRV RIAHWVGQGATISDRVAALIKEVNKAA___ R I A D R V 2 1 0 1 0 1 0 2 1 2 0 0 0 0 0 1 1 1 0 1 0 0 14 0 0 2 1509.7688 P0A7T3 P0A7T3 57 70 rpsP 30S ribosomal protein S16 yes yes 3 2.2079E-11 94.122 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 79674000 19876000 19324000 0 0 20583000 19891000 0 0 1916 124 2077 11155;11156;11157;11158 8598;8599;8600;8601 8601 4 19876000 19780000 0 0 24829000 22035000 0 0 IAIAPDDIAITLHHK MVKRADAGAIVAQLRIAIAPDDIAITLHHK IAIAPDDIAITLHHKLCHAARQLLEQTLPA R I A H K L 3 0 0 2 0 0 0 0 2 4 1 1 0 0 1 0 1 0 0 0 0 0 15 0 0 4 1626.9093 P77398 P77398 150 164 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3;4 5.7605E-40 175.74 By MS/MS By MS/MS By MS/MS By MS/MS 7 7 6 5 20317000000 5904700000 4071700000 0 0 4927600000 5412700000 0 0 1917 432 2078 11159;11160;11161;11162;11163;11164;11165;11166;11167;11168;11169;11170;11171;11172;11173;11174;11175;11176;11177;11178;11179;11180;11181;11182;11183 8602;8603;8604;8605;8606;8607;8608;8609;8610;8611;8612;8613;8614;8615;8616;8617 8613 16 6058700000 4235800000 0 0 6189700000 6042200000 0 0 IAIPGYEPDPSIK LLRDIEKLLKKEIPRIAIPGYEPDPSIKAE PRIAIPGYEPDPSIKAEPIQNGRQQRGGGG R I A I K A 1 0 0 1 0 0 1 1 0 3 0 1 0 0 3 1 0 0 1 0 0 0 13 0 1 4 1398.7395 P25888 P25888 371 383 rhlE ATP-dependent RNA helicase RhlE yes yes 2 1.3637E-08 106.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 373060000 93108000 96567000 0 0 104100000 79290000 0 0 1918 318 2079 11184;11185;11186;11187 8618;8619;8620;8621 8621 4 93108000 98846000 0 0 125580000 87835000 0 0 IALASPDMIR FLKAQTKTEEFDAIKIALASPDMIRSWSFG FDAIKIALASPDMIRSWSFGEVKKPETINY K I A I R S 2 1 0 1 0 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 0 10 0 0 3 1085.5903 P0A8T7 P0A8T7 22 31 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0067464 59.245 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52810000 11635000 13585000 0 0 10974000 16617000 0 0 1919 153 2080 11188;11189;11190;11191 8622;8623;8624;8625 8622 4 11635000 13905000 0 0 13238000 18408000 0 0 IALGDKR HTVEDTGLALGEALKIALGDKRGICRFGFV LALGEALKIALGDKRGICRFGFVLPMDECL K I A K R G 1 1 0 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 1 0 1 771.46029 P06987 P06987 245 251 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 0.0051044 62.717 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 242240000 82160000 87468000 0 0 37138000 35478000 0 0 1920 55 2081 11192;11193;11194;11195;11196;11197;11198 8626;8627;8628;8629 8626 4 132760000 91892000 0 0 44799000 39456000 0 0 IANAGIR VMRIPEKHLAREIERIANAGIRSVMTFGIS HLAREIERIANAGIRSVMTFGISHHTDETG R I A I R S 2 1 1 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 2 713.41842 P0ACB2 P0ACB2 68 74 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.00069426 105.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37414000 9137000 10616000 0 0 8293500 9367400 0 0 1921 207 2082 11199;11200;11201;11202 8630;8631;8632 8630 3 9137000 10867000 0 0 10004000 10377000 0 0 IANYLER IGLVIPDLENTSYTRIANYLERQARQRGYQ LENTSYTRIANYLERQARQRGYQLLIACSE R I A E R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 7 0 1 1 877.46577 P0ACP1 P0ACP1 79 85 cra Catabolite repressor/activator yes yes 2 2.1522E-11 132.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 60928000 10492000 12999000 8580700 9398700 8708900 10749000 0 0 1922 217 2083 11203;11204;11205;11206;11207;11208;11209 8633;8634;8635;8636 8635 4 10492000 13305000 72909000 71257000 23916000 11907000 0 0 IAPEHTEEGPLSK YIKELATHHVGGYLKIAPEHTEEGPLSKMM LKIAPEHTEEGPLSKMMKPGMGSYDRFKEL K I A S K M 1 0 0 0 0 0 3 1 1 1 1 1 0 0 2 1 1 0 0 0 0 0 13 0 3 3 1406.7042 Q46861 Q46861 522 534 ygiQ UPF0313 protein YgiQ yes yes 2;3 5.593E-20 118.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 85207000 20698000 21061000 0 0 22567000 20881000 0 0 1923 441 2084 11210;11211;11212;11213;11214;11215;11216;11217 8637;8638;8639;8640;8641;8642;8643 8639 7 20698000 21558000 0 0 27223000 23131000 0 0 IAPYYHLFGSDELSQR TSVPARFQPQDGKWRIAPYYHLFGSDELSQ APYYHLFGSDELSQRAPVFQSRMPQPYIKL R I A Q R A 1 1 0 1 0 1 1 1 1 1 2 0 0 1 1 2 0 0 2 0 0 0 16 0 1 2 1894.9214 P33602 P33602 812 827 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 4.785E-29 127.57 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 444120000 150170000 103960000 0 0 87300000 102690000 0 0 1924 345 2085 11218;11219;11220;11221;11222;11223;11224;11225 8644;8645;8646;8647;8648;8649;8650 8645 7 150170000 106420000 0 0 105310000 113760000 0 0 IAQLAAQGVRE RGEEVSRPSDDILFEIAQLAAQGVREVNLL ILFEIAQLAAQGVREVNLLGQNVNAWRGEN E I A R E V 3 1 0 0 0 2 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 1 0 3 1154.6408 P0AEI1 P0AEI1 185 195 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.00023257 73.985 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 21447000 1336100 1771200 4785400 4689100 0 0 3712800 5152600 1925 237 2086 11226;11227;11228;11229;11230;11231 8651;8652;8653;8654;8655 8652 5 20528000 27011000 40660000 35551000 0 0 28575000 29570000 IAQQQHAQQQTAGADASANNAKDDDVVDAE AKMQELAQVSQKLMEIAQQQHAQQQTAGAD ASANNAKDDDVVDAEFEEVKDKK_______ E I A A E F 8 0 2 5 0 6 1 1 1 1 0 1 0 0 0 1 1 0 0 2 0 0 30 1 0 8 3108.398 P0A6Y8 P0A6Y8 601 630 dnaK Chaperone protein DnaK yes yes 3;4 3.9747E-197 212.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 2 1 3582600000 538040000 22164000 578950000 684200000 383860000 305960000 475550000 593910000 1926 86 2087 11232;11233;11234;11235;11236;11237;11238;11239;11240;11241;11242;11243;11244;11245 8656;8657;8658;8659;8660;8661;8662;8663;8664;8665;8666;8667;8668;8669;8670 8664 15 8266900000 338000000 4919300000 5187300000 5910000000 4637200000 3660000000 3408400000 IAQQQHAQQQTAGADASANNAKDDDVVDAEFEE AKMQELAQVSQKLMEIAQQQHAQQQTAGAD NNAKDDDVVDAEFEEVKDKK__________ E I A E E V 8 0 2 5 0 6 3 1 1 1 0 1 0 1 0 1 1 0 0 2 0 0 33 1 2 8 3513.5516 P0A6Y8 P0A6Y8 601 633 dnaK Chaperone protein DnaK yes yes 3 8.3122E-100 146.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 261540000 11995000 18886000 0 0 86485000 83423000 0 60747000 1927 86 2088 11246;11247;11248;11249;11250 8671;8672;8673;8674;8675 8674 5 184300000 288020000 0 0 1331500000 1264400000 0 348620000 IAQTKAADMTGADIE NKDKVGKISRAQLQEIAQTKAADMTGADIE IAQTKAADMTGADIEAMTRSIEGTARSMGL E I A I E A 4 0 0 2 0 1 1 1 0 2 0 1 1 0 0 0 2 0 0 0 0 0 15 1 0 4 1533.7345 P0A7J7 P0A7J7 109 123 rplK 50S ribosomal protein L11 yes yes 2 5.4488E-24 124.12 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 1 316100000 36829000 30920000 52108000 56312000 27019000 25685000 48253000 38969000 1928 107 2089;2090 11251;11252;11253;11254;11255;11256;11257;11258;11259;11260;11261;11262;11263;11264;11265 8676;8677;8678;8679;8680;8681;8682;8683;8684;8685;8686 8683 118 11 565870000 471540000 442750000 426940000 415990000 389300000 371360000 223640000 IAQTLLNLAK SEKVGNLAFLDVTGRIAQTLLNLAKQPDAM DVTGRIAQTLLNLAKQPDAMTHPDGMQIKI R I A A K Q 2 0 1 0 0 1 0 0 0 1 3 1 0 0 0 0 1 0 0 0 0 0 10 0 0 2 1083.6652 P0ACJ8 P0ACJ8 144 153 crp cAMP-activated global transcriptional regulator CRP yes yes 2 1.2707E-48 163.99 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 15866000000 5113200000 4537900000 0 0 3284200000 2930800000 0 0 1929 213 2091 11266;11267;11268;11269;11270;11271;11272;11273;11274;11275;11276;11277 8687;8688;8689;8690;8691;8692;8693;8694;8695;8696 8689 9 5132700000 4651200000 0 0 3975900000 3254800000 0 0 IAQTRYYFPTNRGLE EANAYAAGEVYFPPEIAQTRYYFPTNRGLE IAQTRYYFPTNRGLEGKIGEKLAWLAEQDQ E I A L E G 1 2 1 0 0 1 1 1 0 1 1 0 0 1 1 0 2 0 2 0 0 0 15 2 0 2 1827.9268 P0AAZ4 P0AAZ4 410 424 rarA Replication-associated recombination protein A yes yes 3 5.3297E-05 66.246 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 106870000 4576500 6430400 19296000 20702000 2243200 2446800 19869000 31306000 1930 189 2092 11278;11279;11280;11281;11282;11283;11284;11285 8697;8698;8699;8700 8698 4 70317000 98064000 163960000 156960000 34536000 37084000 152910000 179660000 IARALHQQRQQYAEE TLALAVTKHHQQALEIARALHQQRQQYAEE IARALHQQRQQYAEELAQLITDSMHALSMP E I A E E L 3 2 0 0 0 4 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 15 2 1 3 1839.934 P05824 P05824 360 374 recN DNA repair protein RecN yes yes 3 0.0024541 41.644 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20918000 2999300 1698600 2821300 3740400 0 0 2861400 6796900 1931 49 2093 11286;11287;11288;11289;11290;11291 8701;8702;8703 8702 2 46083000 25904000 23972000 28358000 0 0 22022000 39006000 IARATAVAIHGKLVE HHHGDFNMHLWLSPEIARATAVAIHGKLVE IARATAVAIHGKLVELMPQSRAKLDANLKD E I A V E L 4 1 0 0 0 0 1 1 1 2 1 1 0 0 0 0 1 0 0 2 0 0 15 2 0 4 1547.9148 P39172 P39172 150 164 znuA High-affinity zinc uptake system protein ZnuA yes yes 2;3;4 9.9253E-17 102.78 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 3 2 3 3 2207300000 117870000 139510000 381830000 414740000 89091000 92425000 412100000 559720000 1932 361 2094 11292;11293;11294;11295;11296;11297;11298;11299;11300;11301;11302;11303;11304;11305;11306;11307;11308;11309;11310;11311;11312;11313;11314 8704;8705;8706;8707;8708;8709;8710;8711;8712;8713;8714;8715;8716;8717;8718;8719;8720;8721;8722 8705 19 1811000000 2127600000 3244400000 3144400000 1371600000 1400800000 3171600000 3212100000 IATLAGEPLTLKPK NELRHGNVMLDPGKRIATLAGEPLTLKPKE RIATLAGEPLTLKPKEFALLELLMRNAGRV R I A P K E 2 0 0 0 0 0 1 1 0 1 3 2 0 0 2 0 2 0 0 0 0 0 14 1 1 4 1450.8759 P52076 P52076 140 153 qseB Transcriptional regulatory protein QseB yes yes 3 0.0030027 43.813 By matching By MS/MS By MS/MS By matching 1 1 1 1 26350000 7502900 9158500 0 0 4415900 5272600 0 0 1933 374 2095 11315;11316;11317;11318 8723 8723 1 7502900 9374700 0 0 5326900 5840800 0 0 IATYRTLLE DYQELMNTKLALDLEIATYRTLLEGEESRM LALDLEIATYRTLLEGEESRMSGECAPNVS E I A L E G 1 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 2 0 1 0 0 0 9 1 0 1 1078.6023 CON__P04264;CON__REFSEQ:XP_932229 CON__P04264 479 487 no no 2 0.00027806 111.95 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 227260000 7890900 8477300 17195000 16183000 8575300 7925200 73917000 87102000 + 1934 9 2096 11319;11320;11321;11322;11323;11324;11325;11326 8724;8725;8726;8727;8728;8729;8730;8731;8732 8725 9 121240000 129280000 146100000 122690000 132020000 120120000 568880000 499860000 IATYRTLLEGEE DYQELMNTKLALDLEIATYRTLLEGEESRM DLEIATYRTLLEGEESRMSGECAPNVSVSV E I A E E S 1 1 0 0 0 0 3 1 0 1 2 0 0 0 0 0 2 0 1 0 0 0 12 1 2 1 1393.7089 CON__P04264;CON__REFSEQ:XP_932229 CON__P04264 479 490 no no 2 0.019047 51.092 By MS/MS By matching 1 1 5874600 0 0 0 0 0 0 2244200 3630400 + 1935 9 2097 11327;11328 8733 8733 1 0 0 0 0 0 0 17272000 20834000 IAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED VATLHVHINHDDCLEIAVLKGDMGDVQHFA RGVRHGHLQCLPKED_______________ E I A E D - 3 2 0 5 1 3 1 4 3 2 3 2 1 1 1 0 0 0 0 4 0 0 36 4 1 4 4024.016 P0A6Z6 P0A6Z6 98 133 nikR Nickel-responsive regulator yes yes 5;6 0.00022637 24.676 By MS/MS By MS/MS 1 2 34667000 0 0 0 0 12893000 21774000 0 0 1936 89 2098 11329;11330;11331 8734;8735;8736 8735 3 0 0 0 0 198500000 330010000 0 0 IAYNVEAAR IGRLLVDACYSPVERIAYNVEAARVEQRTD YSPVERIAYNVEAARVEQRTDLDKLVIEME R I A A R V 3 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 9 0 1 3 1005.5243 P0A7Z4 P0A7Z4 183 191 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 0.0020559 81.296 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 45151000 9885200 11901000 0 0 10995000 12369000 0 0 1937 135 2099 11332;11333;11334;11335;11336;11337;11338 8737;8738;8739;8740 8737 4 14155000 12182000 0 0 14035000 14511000 0 0 IAYSKDFETLK MLEGAVLDIRYGVSRIAYSKDFETLKVDFL GVSRIAYSKDFETLKVDFLSKLPEMLKMFE R I A L K V 1 0 0 1 0 0 1 0 0 1 1 2 0 1 0 1 1 0 1 0 0 0 11 1 1 1 1313.6867 GST-Nek6 GST-Nek6 109 119 yes yes 3 6.9611E-05 68.44 By MS/MS By MS/MS 1 1 36266000 0 0 0 0 18936000 17330000 0 0 1938 23 2100 11339;11340 8741;8742 8742 2 0 0 0 0 22842000 19198000 0 0 ICPTGVFTDKTHSE EDGTLESEFSGNLVEICPTGVFTDKTHSER EICPTGVFTDKTHSERYNRKWDMQFAPSIC E I C S E R 0 0 0 1 1 0 1 1 1 1 0 1 0 1 1 1 3 0 0 1 0 0 14 1 0 1 1590.7348 P33602 P33602 200 213 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 0.0089358 31.827 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 44322000 6128500 6382200 11065000 11736000 0 2262100 6747400 0 1939 345 2101 11341;11342;11343;11344;11345;11346 8743;8744;8745;8746 8745 4 94163000 97329000 94021000 88978000 0 34285000 51930000 0 ICTLGEK YPLDHEFITGGEYRRICTLGEKLRGLLEED ITGGEYRRICTLGEKLRGLLEEDAFIERGE R I C E K L 0 0 0 0 1 0 1 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 7 0 1 0 819.41604 P0AES6 P0AES6 690 696 gyrB DNA gyrase subunit B yes yes 2 0.0034069 60.799 By MS/MS 1 0 0 0 0 0 0 0 0 0 1940 239 2102 11347 8747 8747 1 0 0 0 0 0 0 0 0 IDAVNEYNQK DGKAISLSGEAQSGRIDAVNEYNQKVQLTF AQSGRIDAVNEYNQKVQLTFNNLKTDGSST R I D Q K V 1 0 2 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 10 0 1 1 1192.5724 P77804 P77804 200 209 ydgA Protein YdgA yes yes 2 0.0042881 55.064 By matching By matching By MS/MS By MS/MS 1 1 1 1 7676800 1660100 1717500 0 0 2328300 1970900 0 0 1941 439 2103 11348;11349;11350;11351 8748 8748 1 1660100 1758100 0 0 2808600 2183300 0 0 IDDEVTVKR HKTQDVRNGQVVVARIDDEVTVKRLKKQGN QVVVARIDDEVTVKRLKKQGNKVELLPENS R I D K R L 0 1 0 2 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 9 1 1 0 1073.5717 P0A7C2 P0A7C2 149 157 lexA LexA repressor yes yes 3 0.020914 23.054 By MS/MS By matching 1 1 2871100 0 1745300 0 0 1125800 0 0 0 1942 101 2104 11352;11353 8749 8749 1 0 1786500 0 0 1358100 0 0 0 IDDYKAVE LSLNDLVLPIFVEEEIDDYKAVEAMPGVMR PIFVEEEIDDYKAVEAMPGVMRIPEKHLAR E I D V E A 1 0 0 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 8 1 0 1 951.45493 P0ACB2 P0ACB2 41 48 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.011661 64.265 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 129370000 0 5711100 22791000 27741000 4035500 0 27720000 41372000 1943 207 2105 11354;11355;11356;11357;11358;11359 8750;8751;8752 8751 3 0 5845900 193650000 210320000 4868100 0 213340000 237430000 IDEEKVVLESLGSIKRA SGEYAMIKFAALAGAIDEEKVVLESLGSIK EEKVVLESLGSIKRAGADLIFSYFALDLAE A I D R A G 1 1 0 1 0 0 3 1 0 2 2 2 0 0 0 2 0 0 0 2 0 0 17 3 3 0 1885.052 P0ACB2 P0ACB2 288 304 hemB Delta-aminolevulinic acid dehydratase yes yes 3 0.015145 25.558 By MS/MS 1 1407300 0 0 0 0 0 1407300 0 0 1944 207 2106 11360 8753 8753 1 0 0 0 0 0 2006100 0 0 IDEVDGEKTFE VYDLGGGTFDISIIEIDEVDGEKTFEVLAT SIIEIDEVDGEKTFEVLATNGDTHLGGEDF E I D F E V 0 0 0 2 0 0 3 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 11 1 2 0 1280.5772 P0A6Y8 P0A6Y8 207 217 dnaK Chaperone protein DnaK yes yes 2 5.8781E-14 129.38 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2000900000 5691500 5925900 442810000 411630000 22305000 963250 543340000 568200000 1945 86 2107 11361;11362;11363;11364;11365;11366;11367;11368 8754;8755;8756;8757;8758 8758 5 87449000 90371000 3762500000 3120800000 343410000 14600000 4181700000 3260800000 IDFLTALYQAE TKVDLQAKLDNLQQEIDFLTALYQAELSQM LQQEIDFLTALYQAELSQMQTQISETNVIL E I D A E L 2 0 0 1 0 1 1 0 0 1 2 0 0 1 0 0 1 0 1 0 0 0 11 0 0 2 1282.6445 CON__P04264 CON__P04264 312 322 yes yes 2 1.6998E-10 121.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50608000 0 1190600 0 0 11231000 29727000 0 8460100 + 1946 9 2108 11369;11370;11371;11372 8759;8760 8760 2 0 18156000 0 0 172910000 450550000 0 48551000 IDGGTFQNEITDRNVMGVP LNLMSVLNPRIKHTAIDGGTFQNEITDRNV TFQNEITDRNVMGVPAVFVNGKEFGQGRMT A I D V P A 0 1 2 2 0 1 1 3 0 2 0 0 1 1 1 0 2 0 0 2 0 0 19 1 1 0 2061.979 P35340 P35340 154 172 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 3.733E-06 51.875 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 95770000 3099400 4519600 0 0 46598000 41552000 0 0 1947 348 2109;2110 11373;11374;11375;11376;11377;11378;11379 8761;8762 8762 281 1 18710000 27050000 0 0 66342000 59232000 0 0 IDIAKRIE MREMGTVELLTREGEIDIAKRIEDGINQVQ LLTREGEIDIAKRIEDGINQVQCSVAEYPE E I D I E D 1 1 0 1 0 0 1 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 8 2 0 1 956.56548 P00579 P00579 117 124 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.00010185 112.17 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 208260000 15868000 14810000 29642000 26005000 3698700 3931500 40679000 73629000 1948 27 2111 11380;11381;11382;11383;11384;11385;11386;11387 8763;8764;8765 8764 3 243810000 225860000 251860000 197160000 56944000 59587000 313080000 422540000 IDIAKRIEDGINQVQCSVAEYPE MREMGTVELLTREGEIDIAKRIEDGINQVQ DGINQVQCSVAEYPEAITYLLEQYDRVEAE E I D P E A 2 1 1 2 1 2 3 1 0 4 0 1 0 0 1 1 0 0 1 2 0 0 23 2 2 3 2646.2959 P00579 P00579 117 139 rpoD RNA polymerase sigma factor RpoD yes yes 3 1.8336E-16 80.412 By MS/MS By MS/MS 1 1 20391000 0 0 0 0 13670000 6721100 0 0 1949 27 2112 11388;11389 8766;8767;8768 8766 3 0 0 0 0 210460000 101870000 0 0 IDIDIER VKELVENSLDAGATRIDIDIERGGAKLIRI SLDAGATRIDIDIERGGAKLIRIRDNGCGI R I D E R G 0 1 0 2 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 872.46035 P23367 P23367 42 48 mutL DNA mismatch repair protein MutL yes yes 2 0.00039516 82.671 By MS/MS By MS/MS By MS/MS 1 1 1 46025000 23424000 0 0 0 22602000 0 0 0 1950 302 2113 11390;11391;11392 8769;8770;8771 8769 2 23424000 0 0 0 27264000 0 0 0 IDKDVVLVDA IETRPGSIVRGVVVAIDKDVVLVDAGLKSE GVVVAIDKDVVLVDAGLKSESAIPAEQFKN A I D D A G 1 0 0 3 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 3 0 0 10 1 0 0 1085.5968 P0AG67 P0AG67 31 40 rpsA 30S ribosomal protein S1 yes yes 2 0.016901 38.086 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5916900 1032900 1037200 0 0 1373600 2473100 0 0 1951 261 2114 11393;11394;11395;11396 8772 8772 0 6235400 6207900 0 0 1955500 3525400 0 0 IDKICKRGE AIDAVEQHGIVFIDEIDKICKRGESSGPDV IVFIDEIDKICKRGESSGPDVSREGVQRDL E I D G E S 0 1 0 1 1 0 1 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 9 3 0 0 1117.5914 P0A6H5 P0A6H5 258 266 hslU ATP-dependent protease ATPase subunit HslU yes yes 3 0.017765 50.353 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 57307000 4643200 4861600 8853400 8982300 1182600 1736800 9209900 17837000 1952 71 2115 11397;11398;11399;11400;11401;11402;11403;11404;11405 8773;8774;8775 8775 3 71342000 74141000 75226000 68100000 17056000 26324000 70882000 102360000 IDKPEADPDR HAKAAQVPVVVAVNKIDKPEADPDRVKNEL VAVNKIDKPEADPDRVKNELSQYGILPEEW K I D D R V 1 1 0 3 0 0 1 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 10 1 1 3 1154.5568 P0A705;P0A705-3;P0A705-2 P0A705 500 509 infB Translation initiation factor IF-2 yes no 3 0.023086 33.875 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 44218000 12594000 13898000 0 0 10055000 7671800 0 0 1953 90 2116 11406;11407;11408;11409 8776 8776 0 12594000 14226000 0 0 12129000 8498600 0 0 IDLAAAPMGVE RKKLREGQLDDKEIEIDLAAAPMGVEIMAP KEIEIDLAAAPMGVEIMAPPGMEEMTSQLQ E I D V E I 3 0 0 1 0 0 1 1 0 1 1 0 1 0 1 0 0 0 0 1 0 0 11 0 0 4 1085.5427 P0A6H5 P0A6H5 175 185 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.01637 35.438 By MS/MS By MS/MS 1 1 8101800 0 0 0 0 0 0 3941700 4160100 1954 71 2117 11410;11411 8777 8777 1 0 0 0 0 0 0 30336000 23874000 IDLGLGR IAEQFGTLNTLYPGRIDLGLGRAPGSDQRT LNTLYPGRIDLGLGRAPGSDQRTMMALRRH R I D G R A 0 1 0 1 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 742.43374 P0ADV5 P0ADV5 106 112 yhbW Uncharacterized protein YhbW yes yes 2 1.5385E-57 172.39 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1247600000 375230000 360160000 0 0 264470000 247700000 0 0 1955 226 2118 11412;11413;11414;11415 8778;8779;8780;8781 8781 4 375230000 368670000 0 0 319030000 274400000 0 0 IDNNIEQISSYKSE AEAWFNEKSKELTTEIDNNIEQISSYKSEI EIDNNIEQISSYKSEITELRRNVQALEIEL E I D S E I 0 0 2 1 0 1 2 0 0 3 0 1 0 0 0 3 0 0 1 0 0 0 14 1 1 0 1638.7737 CON__P13645 CON__P13645 351 364 yes yes 2 2.8533E-19 116.54 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 67831000 7077400 5427300 7957400 5341500 5822300 5767600 13022000 17416000 + 1956 12 2119 11416;11417;11418;11419;11420;11421;11422;11423 8782;8783;8784;8785;8786;8787;8788;8789 8782 8 108740000 82767000 67613000 40497000 89639000 87417000 100220000 99948000 IDNYPELR MEKQAESMLESMASRIDNYPELRARIEQHL LESMASRIDNYPELRARIEQHLSETKNQIV R I D L R A 0 1 1 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 8 0 1 1 1018.5084 P21363 P21363 32 39 yciE Protein YciE yes yes 3 0.0034398 35.295 By MS/MS 1 0 0 0 0 0 0 0 0 0 1957 295 2120 11424 8790 8790 76 0 0 0 0 0 0 0 0 0 IDQLSSDVQTLNAK ILGSTLLAGCSSNAKIDQLSSDVQTLNAKV KIDQLSSDVQTLNAKVDQLSNDVNAMRSDV K I D A K V 1 0 1 2 0 2 0 0 0 1 2 1 0 0 0 2 1 0 0 1 0 0 14 0 0 1 1530.789 P69776 P69776 27 40 lpp Major outer membrane lipoprotein Lpp yes yes 2 2.9024E-30 175.97 By matching By matching By matching By MS/MS 1 1 1 1 71204000 16614000 16758000 0 0 17427000 20406000 0 0 1958 404 2121 11425;11426;11427;11428 8791 8791 1 16614000 17153000 0 0 21022000 22605000 0 0 IDQQYDVFSDIR GIQAKRQRFVDHLQKIDQQYDVFSDIRGMG LQKIDQQYDVFSDIRGMGLLIGAELKPQYK K I D I R G 0 1 0 3 0 2 0 0 0 2 0 0 0 1 0 1 0 0 1 1 0 0 12 0 0 0 1497.71 P18335 P18335 325 336 argD Acetylornithine/succinyldiaminopimelate aminotransferase yes yes 2 1.3718E-05 93.258 By MS/MS By MS/MS 1 1 19013000 0 9578800 0 0 9434600 0 0 0 1959 291 2122 11429;11430 8792;8793 8792 2 0 9804900 0 0 11381000 0 0 0 IDRPEEYADIATK IFNPNLFPYENMEGKIDRPEEYADIATKCV GKIDRPEEYADIATKCVTNFREKNRDRCLV K I D T K C 2 1 0 2 0 0 2 0 0 2 0 1 0 0 1 0 1 0 1 0 0 0 13 1 2 3 1519.7518 P0A8E1 P0A8E1 102 114 ycfP UPF0227 protein YcfP yes yes 2;3 2.8486E-183 227.31 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2688200000 819190000 525490000 0 0 657790000 685680000 0 0 1960 143 2123 11431;11432;11433;11434;11435;11436;11437;11438 8794;8795;8796;8797;8798;8799;8800;8801 8799 8 819190000 537900000 0 0 793490000 759580000 0 0 IDVIVQALAGAK SAPAVDGIEPELQSKIDVIVQALAGAKKPL QSKIDVIVQALAGAKKPLIISGTNAGSLEV K I D A K K 3 0 0 1 0 1 0 1 0 2 1 1 0 0 0 0 0 0 0 2 0 0 12 0 0 3 1196.7129 P33602 P33602 483 494 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 1.7215E-19 133.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71266000 14445000 15453000 0 0 15386000 25983000 0 0 1961 345 2124 11439;11440;11441;11442 8802;8803;8804;8805;8806 8802 5 14445000 15818000 0 0 18560000 28783000 0 0 IDVKAVAE GNVHIISHPGNPKYEIDVKAVAEAAAKHQV PGNPKYEIDVKAVAEAAAKHQVALEINNSS E I D A E A 2 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 8 1 0 2 843.47018 P75914 P75914 139 146 ycdX Probable phosphatase YcdX yes yes 2 0.0047768 86.794 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33080000 10655000 15849000 0 0 6575300 0 0 0 1962 412 2125 11443;11444;11445;11446 8807;8808;8809;8810 8810 4 163710000 241700000 0 0 101230000 0 0 0 IDVLDKNNRLAE THAPGMSQRRMLEVEIDVLDKNNRLAERNR EVEIDVLDKNNRLAERNRARFAARKQLVLN E I D A E R 1 1 2 2 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 12 2 0 1 1398.7467 P0AAN3 P0AAN3 82 93 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 0.00029493 64.121 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 99391000 8286400 9433700 13094000 13130000 6552900 5849700 16597000 26447000 1963 187 2126 11447;11448;11449;11450;11451;11452;11453;11454 8811;8812;8813 8811 3 127320000 143870000 111260000 99549000 100890000 88661000 127730000 151770000 IDVLRRQAAQRFGGNE KANDIDVPAALIDSEIDVLRRQAAQRFGGN DVLRRQAAQRFGGNEKQALELPRELFEEQA E I D N E K 2 3 1 1 0 2 1 2 0 1 1 0 0 1 0 0 0 0 0 1 0 0 16 3 0 2 1828.9656 P0A850 P0A850 311 326 tig Trigger factor yes yes 3 0.0063292 34.851 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 175120000 4917000 7705300 30408000 26409000 2923900 3243400 39427000 60090000 1964 137 2127 11455;11456;11457;11458;11459;11460;11461;11462 8814 8814 1 75548000 117510000 258370000 200220000 45016000 49159000 303440000 344850000 IDYKDIATLKNYITE RRRKFCRFTAEGVQEIDYKDIATLKNYITE IDYKDIATLKNYITESGKIVPSRITGTRAK E I D T E S 1 0 1 2 0 0 1 0 0 3 1 2 0 0 0 0 2 0 2 0 0 0 15 2 0 1 1798.9353 P0A7T7 P0A7T7 21 35 rpsR 30S ribosomal protein S18 yes yes 2;3 6.4046E-15 82.908 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 44488000 769820 975050 0 0 21909000 20834000 0 0 1965 125 2128 11463;11464;11465;11466;11467 8815;8816;8817 8817 3 11828000 14870000 0 0 337310000 315770000 0 0 IDYQEGIKNP RDEHRVLHVIPQEYAIDYQEGIKNPVGLSG PQEYAIDYQEGIKNPVGLSGVRMQAKVHLI A I D N P V 0 0 1 1 0 1 1 1 0 2 0 1 0 0 1 0 0 0 1 0 0 0 10 1 1 0 1175.5823 P0ABH0 P0ABH0 137 146 ftsA Cell division protein FtsA yes yes 2 4.7231E-06 116.05 By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 61857000 8162400 8067400 0 0 24940000 20687000 0 0 1966 199 2129 11468;11469;11470;11471;11472 8818;8819 8818 0 49273000 48284000 0 0 35507000 29490000 0 0 IEAAGGKIEE VTVRGLRVTKGARAAIEAAGGKIEE_____ GARAAIEAAGGKIEE_______________ A I E E E - 2 0 0 0 0 0 3 2 0 2 0 1 0 0 0 0 0 0 0 0 0 0 10 1 2 2 1015.5186 P02413 P02413 135 144 rplO 50S ribosomal protein L15 yes yes 2 0.0056459 74.464 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 45670000 7550200 7638300 0 0 14969000 15513000 0 0 1967 37 2130 11473;11474;11475;11476 8820;8821;8822 8822 3 45577000 45715000 0 0 21311000 22113000 0 0 IEAIPQIDK MCLDAFPKLVCFKKRIEAIPQIDKYLKSSK VCFKKRIEAIPQIDKYLKSSKYIAWPLQGW R I E D K Y 1 0 0 1 0 1 1 0 0 3 0 1 0 0 1 0 0 0 0 0 0 0 9 0 1 2 1025.5757 GST-Nek6 GST-Nek6 183 191 yes yes 2 3.4065E-09 118.33 By MS/MS By MS/MS 1 1 1566100000 0 0 0 0 698340000 867790000 0 0 1968 23 2131 11477;11478 8823;8824 8824 2 0 0 0 0 842410000 961320000 0 0 IEALAEDFSDK ALPSRIEQMLSQDKRIEALAEDFSDKHHAL QDKRIEALAEDFSDKHHALFLGRGDQYPIA R I E D K H 2 0 0 2 0 0 2 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 11 0 2 2 1236.5874 P17169 P17169 455 465 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.6317E-65 179.8 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2022600000 527550000 459650000 0 0 412180000 623260000 0 0 1969 288 2132 11479;11480;11481;11482 8825;8826;8827;8828 8825 4 527550000 470500000 0 0 497210000 690430000 0 0 IEALAEDFSDKHHALFLGR ALPSRIEQMLSQDKRIEALAEDFSDKHHAL AEDFSDKHHALFLGRGDQYPIALEGALKLK R I E G R G 3 1 0 2 0 0 2 1 2 1 3 1 0 2 0 1 0 0 0 0 0 0 19 1 2 3 2168.1015 P17169 P17169 455 473 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3;4;5 3.9093E-143 213.32 By MS/MS By MS/MS By MS/MS By MS/MS 7 6 8 9 15805000000 4392600000 3367800000 0 0 4322400000 3721700000 0 0 1970 288 2133 11483;11484;11485;11486;11487;11488;11489;11490;11491;11492;11493;11494;11495;11496;11497;11498;11499;11500;11501;11502;11503;11504;11505;11506;11507;11508;11509;11510;11511;11512 8829;8830;8831;8832;8833;8834;8835;8836;8837;8838;8839;8840;8841;8842;8843;8844;8845;8846;8847 8845 18 4746900000 3474600000 0 0 5808700000 4309400000 0 0 IEAQMHGGGHER KGIGALYVRRKPRVRIEAQMHGGGHERGMR RVRIEAQMHGGGHERGMRSGTLPVHQIVGM R I E E R G 1 1 0 0 0 1 2 3 2 1 0 0 1 0 0 0 0 0 0 0 0 0 12 0 2 1 1320.5993 P0A6B7 P0A6B7 226 237 iscS Cysteine desulfurase IscS yes yes 3 0.0013206 52.693 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7748600 2763900 2739300 0 0 1215800 1029600 0 0 1971 67 2134 11513;11514;11515;11516 8848;8849 8848 2 2763900 2803900 0 0 1466600 1140600 0 0 IEDIDPPR SYLQARARQGRWLVRIEDIDPPREVPGAAE QGRWLVRIEDIDPPREVPGAAETILRQLEH R I E P R E 0 1 0 2 0 0 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 8 0 1 2 953.48181 P27305 P27305 54 61 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 2 0.0090608 53.968 By MS/MS By MS/MS By MS/MS 1 1 1 20158000 0 5654800 0 0 8294400 6208400 0 0 1972 322 2135 11517;11518;11519 8850 8850 1 0 5788200 0 0 10006000 6877500 0 0 IEDIDPPREVPGAAETILR SYLQARARQGRWLVRIEDIDPPREVPGAAE DPPREVPGAAETILRQLEHYGLHWDGDVLW R I E L R Q 2 2 0 2 0 0 3 1 0 3 1 0 0 0 3 0 1 0 0 1 0 0 19 1 3 5 2090.1008 P27305 P27305 54 72 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 3 2.3811E-05 62.203 By MS/MS By MS/MS 1 1 6671000 6671000 0 0 0 0 0 0 0 1973 322 2136 11520;11521 8851;8852 8851 2 6671000 0 0 0 0 0 0 0 IEDTDLER SWLFARNHGGEFVLRIEDTDLERSTPEAIE GGEFVLRIEDTDLERSTPEAIEAIMDGMNW R I E E R S 0 1 0 2 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 8 0 2 0 989.46655 P04805 P04805 41 48 gltX Glutamate--tRNA ligase yes yes 2 2.2202E-17 136.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60766000 14072000 13788000 0 0 16726000 16181000 0 0 1974 45 2137 11522;11523;11524;11525 8853;8854;8855;8856 8854 4 14072000 14113000 0 0 20176000 17925000 0 0 IEDVPQEQR RMVYAPTQEHGKQVKIEDVPQEQRDIFSLT HGKQVKIEDVPQEQRDIFSLTNEEVQELAK K I E Q R D 0 1 0 1 0 2 2 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 2 1 1112.5462 P23538 P23538 281 289 ppsA Phosphoenolpyruvate synthase yes yes 2 0.00083023 92.439 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14753000 3961400 4181400 0 0 3657600 2953100 0 0 1975 303 2138 11526;11527;11528;11529 8857;8858;8859;8860 8858 4 3961400 4280000 0 0 4412200 3271400 0 0 IEEMVSIANR LIYRSHIRDDEPVKKIEEMVSIANRRNMQS EPVKKIEEMVSIANRRNMQSDVTGILLFNG K I E N R R 1 1 1 0 0 0 2 0 0 2 0 0 1 0 0 1 0 0 0 1 0 0 10 0 2 1 1160.586 P75990 P75990 20 29 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 7.6238E-05 99.802 By matching By MS/MS By MS/MS By matching By matching 1 1 1 2 1 18918000 3550600 3793900 0 0 3664100 6286000 0 1623400 1976 414 2139 11530;11531;11532;11533;11534;11535 8861;8862 8862 2 3550600 3883400 0 0 4420100 7111900 0 9316400 IEISELNR QITAGRHGDSVRNSKIEISELNRVIQRLRS DSVRNSKIEISELNRVIQRLRSEIDNVKKQ K I E N R V 0 1 1 0 0 0 2 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 8 0 2 0 972.52401 CON__P04264;CON__P35908v2;CON__P35908 CON__P04264 396 403 no no 2 1.0069E-89 197.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1808500000 227740000 249720000 0 0 615040000 715950000 0 0 + 1977 9;16 2140 11536;11537;11538;11539 8863;8864;8865;8866 8863 4 227740000 255610000 0 0 741930000 793110000 0 0 IELEDKFE GAPTITKDGVSVAREIELEDKFENMGAQMV GVSVAREIELEDKFENMGAQMVKEVASKAN E I E F E N 0 0 0 1 0 0 3 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 8 1 2 0 1021.4968 P0A6F5 P0A6F5 60 67 groL 60 kDa chaperonin yes yes 2 0.0009748 110.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 508250000 5560800 5057400 131200000 139370000 15586000 15919000 1179000 194380000 1978 68 2141 11540;11541;11542;11543;11544;11545;11546;11547 8867;8868;8869;8870 8869 4 85441000 77127000 1114800000 1056600000 239960000 241280000 9073900 1115500000 IELLPYHELGK HRLGEFTRDMGNVEKIELLPYHELGKHKWV NVEKIELLPYHELGKHKWVAMGEEYKLDGV K I E G K H 0 0 0 0 0 0 2 1 1 1 3 1 0 0 1 0 0 0 1 0 0 0 11 0 2 1 1310.7234 P0A9N4 P0A9N4 197 207 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2;3 2.7006E-23 154.85 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 783920000 228260000 224030000 0 0 157520000 174110000 0 0 1979 171 2142 11548;11549;11550;11551;11552;11553;11554;11555 8871;8872;8873;8874;8875;8876;8877;8878 8872 8 228260000 229310000 0 0 190020000 192880000 0 0 IELQSQLSKKAALE AKEVTQLRHGVQELEIELQSQLSKKAALEK EIELQSQLSKKAALEKSLEDTKNRYCGQLQ E I E L E K 2 0 0 0 0 2 2 0 0 1 3 2 0 0 0 2 0 0 0 0 0 0 14 2 1 2 1556.8774 CON__P35527 CON__P35527 382 395 yes yes 3 0.0011647 41.996 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 56689000 0 0 8484000 9537200 0 0 13644000 25024000 + 1980 15 2143 11556;11557;11558;11559;11560 8879;8880 8879 1 0 0 72087000 72307000 0 0 105010000 143610000 IELSSAQQTDVNLPYITADATGPK PLAMQRLKEAAEKAKIELSSAQQTDVNLPY DVNLPYITADATGPKHMNIKVTRAKLESLV K I E P K H 3 0 1 2 0 2 1 1 0 2 2 1 0 0 2 2 3 0 1 1 0 0 24 0 1 5 2531.2755 P0A6Y8 P0A6Y8 271 294 dnaK Chaperone protein DnaK yes yes 3 1.8034E-23 93.633 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 77353000 11904000 10947000 0 0 24619000 29883000 0 0 1981 86 2144 11561;11562;11563;11564 8881;8882;8883 8883 3 11904000 11205000 0 0 29698000 33104000 0 0 IENLEELVTATR RTMYEQEKGEKGQTRIENLEELVTATRQFS QTRIENLEELVTATRQFSYNEEDEDLMPLQ R I E T R Q 1 1 1 0 0 0 3 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 12 0 3 1 1386.7355 P03018 P03018 506 517 uvrD DNA helicase II yes yes 2 1.204E-09 111.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25449000 6749900 6095900 0 0 5213000 7390400 0 0 1982 41 2145 11565;11566;11567;11568 8884;8885;8886;8887 8884 4 6749900 6239700 0 0 6288500 8186900 0 0 IENLTQGNYTP ILSRDDSHGYELIKAIENLTQGNYTPSPGV LIKAIENLTQGNYTPSPGVIYPTLDFLQEQ A I E T P S 0 0 2 0 0 1 1 1 0 1 1 0 0 0 1 0 2 0 1 0 0 0 11 0 1 0 1248.5986 P64588 P64588 85 95 yqjI Transcriptional regulator YqjI yes yes 2 0.0013644 65.347 By matching By matching By MS/MS By MS/MS 1 1 2 2 76723000 4647900 3501700 0 0 38516000 30057000 0 0 1983 398 2146 11569;11570;11571;11572;11573;11574 8888 8888 1 4647900 3584400 0 0 53480000 40750000 0 0 IEPDFVAAQLDSVFSDVR ALVAQNTRGVQSVYRIEPDFVAAQLDSVFS DFVAAQLDSVFSDVRIDTTKIGMLAETDIV R I E V R I 2 1 0 3 0 1 1 0 0 1 1 0 0 2 1 2 0 0 0 3 0 0 18 0 1 3 2006.9949 P76422 P76422 55 72 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 1.6339E-75 165.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 594470000 68512000 57722000 0 0 244770000 223460000 0 0 1984 425 2147 11575;11576;11577;11578 8889;8890;8891;8892 8891 4 68512000 59085000 0 0 295270000 247540000 0 0 IEPSLEAAFVDYGAER HEQKKANIYKGKITRIEPSLEAAFVDYGAE EPSLEAAFVDYGAERHGFLPLKEIAREYFP R I E E R H 3 1 0 1 0 0 3 1 0 1 1 0 0 1 1 1 0 0 1 1 0 0 16 0 3 4 1765.8523 P21513 P21513 49 64 rne Ribonuclease E yes yes 2 2.156E-19 113.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32081000 7127500 7802100 0 0 6329200 10823000 0 0 1985 297 2148 11579;11580;11581;11582 8893;8894;8895;8896 8895 4 7127500 7986300 0 0 7634900 11989000 0 0 IEQAPGQHGAR LFLKSGVRAIDTKCKIEQAPGQHGARKPRL TKCKIEQAPGQHGARKPRLSDYGVQLREKQ K I E A R K 2 1 0 0 0 2 1 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 11 0 1 3 1162.5843 P0A7V8 P0A7V8 34 44 rpsD 30S ribosomal protein S4 yes yes 2;3 3.0356E-23 141.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 446530000 155120000 152110000 0 0 77957000 61350000 0 0 1986 130 2149 11583;11584;11585;11586;11587;11588;11589;11590 8897;8898;8899;8900;8901;8902;8903;8904;8905;8906;8907;8908;8909;8910 8907 14 155120000 155700000 0 0 94040000 67962000 0 0 IEQCDYPPLPGEHYSEK PFYGDKMNLFSLCQKIEQCDYPPLPGEHYS QCDYPPLPGEHYSEKLRELVSMCIYPDPDH K I E E K L 0 0 0 1 1 1 3 1 1 1 1 1 0 0 3 1 0 0 2 0 0 0 17 0 3 3 2060.915 GST-Nek6 GST-Nek6 492 508 yes yes 2;3 1.9843E-07 96.464 By MS/MS By MS/MS 2 2 172290000 0 0 0 0 85003000 87287000 0 0 1987 23 2150 11591;11592;11593;11594 8911;8912;8913;8914 8914 4 0 0 0 0 102540000 96695000 0 0 IEQFLDALWLEK ______________________________ LARIEQFLDALWLEKNLAENTLNAYRRDLS R I E E K N 1 0 0 1 0 1 2 0 0 1 3 1 0 1 0 0 0 1 0 0 0 0 12 0 2 1 1503.7973 P0A8P8 P0A8P8 8 19 xerD Tyrosine recombinase XerD yes yes 2 2.4766E-58 171.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 498400000 125000000 166500000 0 0 86758000 120140000 0 0 1988 151 2151 11595;11596;11597;11598 8915;8916;8917;8918 8917 4 125000000 170430000 0 0 104660000 133090000 0 0 IEQGDHVIMFLTDKK VVRGNDVMIANDNLRIEQGDHVIMFLTDKK IEQGDHVIMFLTDKKFITDVERLFQPSPFF R I E K K F 0 0 0 2 0 1 1 1 1 2 1 2 1 1 0 0 1 0 0 1 0 0 15 1 1 0 1772.9131 P0AGI8 P0AGI8 428 442 trkA Trk system potassium uptake protein TrkA yes yes 3 0.00092219 47.545 By MS/MS By MS/MS By matching By matching 1 1 1 1 21866000 5800100 9119500 0 0 3174900 3771700 0 0 1989 264 2152 11599;11600;11601;11602 8919;8920 8920 2 5800100 9334800 0 0 3829900 4178200 0 0 IEQLYPFPHK EQRRKNNQHDVAIVRIEQLYPFPHKAMQEV VAIVRIEQLYPFPHKAMQEVLQQFAHVKDF R I E H K A 0 0 0 0 0 1 1 0 1 1 1 1 0 1 2 0 0 0 1 0 0 0 10 0 1 2 1270.671 P0AFG3 P0AFG3 845 854 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 2.0707E-20 135.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 366490000 95244000 87970000 0 0 75174000 108100000 0 0 1990 246 2153 11603;11604;11605;11606;11607;11608;11609;11610 8921;8922;8923;8924;8925;8926;8927;8928 8926 8 95244000 90046000 0 0 90683000 119750000 0 0 IEQMLSQDK IEHDIVHGLQALPSRIEQMLSQDKRIEALA QALPSRIEQMLSQDKRIEALAEDFSDKHHA R I E D K R 0 0 0 1 0 2 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 9 0 1 0 1090.5329 P17169 P17169 445 453 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 7.0228E-48 169.12 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1836000000 313790000 370310000 0 0 564250000 587630000 0 0 1991 288 2154;2155 11611;11612;11613;11614;11615;11616;11617;11618 8929;8930;8931;8932;8933;8934;8935;8936;8937;8938 8934 247 10 313790000 379050000 0 0 680660000 650960000 0 0 IEQMLSQDKR IEHDIVHGLQALPSRIEQMLSQDKRIEALA ALPSRIEQMLSQDKRIEALAEDFSDKHHAL R I E K R I 0 1 0 1 0 2 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 10 1 1 0 1246.634 P17169 P17169 445 454 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 8.6215E-93 196.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 6 2 2 4 5 6458000000 1781500000 2287000000 46315000 57847000 1223600000 1061800000 0 0 1992 288 2156;2157 11619;11620;11621;11622;11623;11624;11625;11626;11627;11628;11629;11630;11631;11632;11633;11634;11635;11636;11637;11638;11639;11640;11641;11642;11643 8939;8940;8941;8942;8943;8944;8945;8946;8947;8948;8949;8950;8951;8952;8953;8954 8950 247 14 1794800000 2354000000 393530000 438570000 1493200000 1189100000 0 0 IERGQVLAKPGTIKPHTKFE GENVGVLLRGIKREEIERGQVLAKPGTIKP VLAKPGTIKPHTKFESEVYILSKDEGGRHT E I E F E S 1 1 0 0 0 1 2 2 1 2 1 3 0 1 2 0 2 0 0 1 0 0 20 4 1 3 2248.2692 P0CE48;P0CE47 P0CE48 287 306 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 5 1.9778E-05 53.188 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 96544000 18074000 13423000 10335000 11234000 9128200 7865100 12617000 13867000 1993 269 2158 11644;11645;11646;11647;11648;11649;11650;11651 8955;8956;8957;8958 8958 4 277710000 204710000 87816000 85168000 140540000 119210000 97104000 79582000 IETLFTNDLDHGPYISETLR SLDLLAKLSQSGHKRIETLFTNDLDHGPYI TNDLDHGPYISETLRVDPTNDRLSALVEIY R I E L R V 0 1 1 2 0 0 2 1 1 2 3 0 0 1 1 1 3 0 1 0 0 0 20 0 2 1 2333.1539 P0A8V2 P0A8V2 333 352 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 2.9167E-25 99.891 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22602000 4409600 4335400 0 0 4348000 9509100 0 0 1994 154 2159 11652;11653;11654;11655 8959;8960;8961;8962;8963 8963 5 4409600 4437800 0 0 5245000 10534000 0 0 IETLVPDFR ADCITAIREKSPQIKIETLVPDFRGRMDRA KSPQIKIETLVPDFRGRMDRALDILTATPP K I E F R G 0 1 0 1 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 9 0 1 1 1088.5866 P60716 P60716 165 173 lipA Lipoyl synthase yes yes 2 4.2667E-14 133.86 By MS/MS By MS/MS By MS/MS 1 1 1 54716000 19642000 0 0 0 17393000 17681000 0 0 1995 382 2160 11656;11657;11658 8964;8965;8966 8964 3 19642000 0 0 0 20982000 19587000 0 0 IEVGRDDGVEVR PRRERRDVGDMQLYRIEVGRDDGVEVRHIV LYRIEVGRDDGVEVRHIVGAIANEGDISSR R I E V R H 0 2 0 2 0 0 2 2 0 1 0 0 0 0 0 0 0 0 0 3 0 0 12 1 2 0 1342.6841 P0A9P6 P0A9P6 491 502 deaD ATP-dependent RNA helicase DeaD yes yes 3 1.7941E-05 75.479 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44330000 11255000 13291000 0 0 11268000 8516400 0 0 1996 173 2161 11659;11660;11661;11662 8967;8968;8969;8970 8967 4 11255000 13604000 0 0 13592000 9434300 0 0 IEVKGIKDVVTQPQA RAALIDCLAPDRRVEIEVKGIKDVVTQPQA IEVKGIKDVVTQPQA_______________ E I E Q A - 1 0 0 1 0 2 1 1 0 2 0 2 0 0 1 0 1 0 0 3 0 0 15 2 1 1 1623.9196 P0A910 P0A910 332 346 ompA Outer membrane protein A yes yes 3 0.014271 24.191 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 1 41021000 4983700 4605600 4476800 4933000 8359300 8616200 5046500 0 1997 158 2162 11663;11664;11665;11666;11667;11668;11669 8971;8972;8973 8971 3 76573000 70236000 38039000 37400000 128700000 130590000 38839000 0 IEYTESTSAAMEK FQQCSKFLNRYPHWKIEYTESTSAAMEKVA WKIEYTESTSAAMEKVAQAKSPHVAALGSE K I E E K V 2 0 0 0 0 0 3 0 0 1 0 1 1 0 0 2 2 0 1 0 0 0 13 0 3 2 1458.6548 P0A9J8 P0A9J8 228 240 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 3.7729E-70 174.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 861690000 226430000 272380000 0 0 183430000 179450000 0 0 1998 166 2163;2164 11670;11671;11672;11673;11674;11675;11676;11677 8974;8975;8976;8977;8978;8979;8980;8981 8978 155 8 226430000 278800000 0 0 221270000 198790000 0 0 IFADLGISLHGAR LIALDQPGLLARVGKIFADLGISLHGARIT GKIFADLGISLHGARITTIGERVEDLFIIA K I F A R I 2 1 0 1 0 0 0 2 1 2 2 0 0 1 0 1 0 0 0 0 0 0 13 0 0 2 1368.7514 P27249 P27249 834 846 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.00089972 56.956 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14575000 2952400 2850500 0 0 4542200 4229800 0 0 1999 320 2165 11678;11679;11680;11681 8982;8983 8982 2 2952400 2917800 0 0 5479200 4685700 0 0 IFALHELHR ______________________________ DSTLIRIFALHELHRLKEHGLTRGALLDYH R I F H R L 1 1 0 0 0 0 1 0 2 1 2 0 0 1 0 0 0 0 0 0 0 0 9 0 1 1 1134.6298 P24252 P24252 14 22 ybgA Uncharacterized protein YbgA yes yes 2;3 6.9987E-61 179.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 805720000 241950000 189730000 7443300 0 169810000 196790000 0 0 2000 313 2166 11682;11683;11684;11685;11686;11687;11688;11689;11690;11691 8984;8985;8986;8987;8988;8989;8990;8991 8985 8 241950000 194210000 63244000 0 204840000 218000000 0 0 IFDFVKPGVITGDDVQK ______________________________ DFVKPGVITGDDVQKVFQVAKENNFALPAV K I F Q K V 0 0 0 3 0 1 0 2 0 2 0 2 0 2 1 0 1 0 0 3 0 0 17 1 0 1 1876.9935 P0AB71 P0AB71 4 20 fbaA Fructose-bisphosphate aldolase class 2 yes yes 3 2.4886E-07 73.498 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 69983000 13409000 14032000 0 0 18463000 24079000 0 0 2001 190 2167 11692;11693;11694;11695 8992;8993;8994 8992 3 13409000 14363000 0 0 22272000 26674000 0 0 IFGNCTTIATNNK IVANRHLDYFHKLKKIFGNCTTIATNNKFV KKIFGNCTTIATNNKFVVLKAVKLGRRR__ K I F N K F 1 0 3 0 1 0 0 1 0 2 0 1 0 1 0 0 3 0 0 0 0 0 13 0 0 1 1452.7031 P42596 P42596 353 365 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 2.9668E-16 98.156 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28791000 0 15807000 0 0 12985000 0 0 0 2002 366 2168 11696;11697;11698;11699 8995;8996;8997;8998 8995 4 0 16180000 0 0 15664000 0 0 0 IFGPVTR CVLLNNNSEQPIGTRIFGPVTRELRSEKFM SEQPIGTRIFGPVTRELRSEKFMKIISLAP R I F T R E 0 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 7 0 0 1 788.45447 P0ADY3 P0ADY3 99 105 rplN 50S ribosomal protein L14 yes yes 2 7.492E-07 118.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3253500000 859270000 985280000 0 0 755330000 653630000 0 0 2003 228 2169 11700;11701;11702;11703 8999;9000;9001;9002 8999 4 859270000 1008500000 0 0 911160000 724080000 0 0 IFHVNADDP STPYCTDIGKMVQAPIFHVNADDPEAVAFV KMVQAPIFHVNADDPEAVAFVTRLALDFRN P I F D P E 1 0 1 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 0 9 0 0 1 1026.4771 P0AFG3 P0AFG3 419 427 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.01308 54.549 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12072000 1214100 1452800 0 0 5574500 3830700 0 0 2004 246 2170 11704;11705;11706;11707 9003 9003 0 7329200 8694800 0 0 7936300 5460700 0 0 IFVDEGPSMK EHNDGADIDDLKVTKIFVDEGPSMKRIMPR LKVTKIFVDEGPSMKRIMPRAKGRADRILK K I F M K R 0 0 0 1 0 0 1 1 0 1 0 1 1 1 1 1 0 0 0 1 0 0 10 0 1 1 1121.5427 P61175 P61175 74 83 rplV 50S ribosomal protein L22 yes yes 2 9.7922E-38 157.68 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 259320000 70240000 69372000 0 0 55804000 63128000 0 772120 2005 385 2171;2172 11708;11709;11710;11711;11712;11713;11714;11715;11716 9004;9005;9006;9007;9008;9009;9010;9011;9012 9008 305 9 70240000 71009000 0 0 67317000 69931000 0 4431100 IFVEEEIDDYKA MFEETTLSLNDLVLPIFVEEEIDDYKAVEA VLPIFVEEEIDDYKAVEAMPGVMRIPEKHL P I F K A V 1 0 0 2 0 0 3 0 0 2 0 1 0 1 0 0 0 0 1 1 0 0 12 1 3 0 1469.6926 P0ACB2 P0ACB2 35 46 hemB Delta-aminolevulinic acid dehydratase yes yes 2 6.9828E-21 122.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8441500 791470 1035400 0 0 0 6614700 0 0 2006 207 2173 11717;11718;11719;11720 9013;9014 9013 2 4777700 6196700 0 0 0 9429200 0 0 IGAPAAVQIQYQGKPVDLSR DGNLNLTGQAPYKLKIGAPAAVQIQYQGKP AVQIQYQGKPVDLSRFIRTNQVARLTLNAE K I G S R F 3 1 0 1 0 3 0 2 0 2 1 1 0 0 2 1 0 0 1 2 0 0 20 1 0 5 2110.1535 P27434 P27434 298 317 rodZ Cytoskeleton protein RodZ yes yes 3 0.0037224 36.481 By MS/MS 1 0 0 0 0 0 0 0 0 0 2007 324 2174 11721 9015 9015 1 0 0 0 0 0 0 0 0 IGDDEDSHLGDFIEDTTLELP KVLKIAKEPISMETPIGDDEDSHLGDFIED SHLGDFIEDTTLELPLDSATTESLRAATHD P I G L P L 0 0 0 5 0 0 3 2 1 2 3 0 0 1 1 1 2 0 0 0 0 0 21 0 3 0 2330.0438 P00579 P00579 511 531 rpoD RNA polymerase sigma factor RpoD yes yes 2 1.0431E-13 75.78 By MS/MS By MS/MS By MS/MS 1 1 1 18347000 3012900 2478200 0 0 12856000 0 0 0 2008 27 2175 11722;11723;11724 9016 9016 1 18188000 14832000 0 0 18303000 0 0 0 IGENINIR LKAQFEEERVALVAKIGENINIRRVAALEG RVALVAKIGENINIRRVAALEGDVLGSYQH K I G I R R 0 1 2 0 0 0 1 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1 0 927.51378 P0A6P1 P0A6P1 126 133 tsf Elongation factor Ts yes yes 2 1.7167E-07 120.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 33729000 5400200 5851500 0 0 9401200 13076000 0 0 2009 77 2176 11725;11726;11727;11728;11729;11730 9017;9018;9019;9020 9019 4 5400200 5989600 0 0 11341000 14485000 0 0 IGEVANR GERCDLDTTYRFNSRIGEVANRFIQQNPGQ TTYRFNSRIGEVANRFIQQNPGQLKKPLNS R I G N R F 1 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 7 0 1 1 757.40825 P15038 P15038 508 514 helD Helicase IV yes yes 2 5.962E-47 132.94 By MS/MS By MS/MS By MS/MS 2 1 2 69719000 24216000 33514000 0 0 0 11989000 0 0 2010 281 2177 11731;11732;11733;11734;11735 9021;9022;9023;9024 9023 2 25940000 34305000 0 0 0 13402000 0 0 IGEVHDGAATMDWMEQEQER TTTERILFYTGVNHKIGEVHDGAATMDWME DGAATMDWMEQEQERGITITSAATTAFWSG K I G E R G 2 1 0 2 0 2 4 2 1 1 0 0 2 0 0 0 1 1 0 1 0 0 20 0 4 2 2330.9896 P0A6M8 P0A6M8 40 59 fusA Elongation factor G yes yes 3 0.00088242 36.856 By MS/MS By matching By matching 1 1 1 17694000 6056100 5538600 0 0 0 6099500 0 0 2011 76 2178 11736;11737;11738 9025 9025 1 6056100 5669300 0 0 0 6756900 0 0 IGFLCDIR PLICGVGLGGYWAERIGFLCDIRQVIFNPN GGYWAERIGFLCDIRQVIFNPNLFPYENME R I G I R Q 0 1 0 1 1 0 0 1 0 2 1 0 0 1 0 0 0 0 0 0 0 0 8 0 0 0 992.51134 P0A8E1 P0A8E1 77 84 ycfP UPF0227 protein YcfP yes yes 2 1.7241E-07 120.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 161150000 52146000 30967000 0 0 40643000 37395000 0 0 2012 143 2179 11739;11740;11741;11742 9026;9027;9028;9029 9028 4 52146000 31698000 0 0 49027000 41425000 0 0 IGFMVGNK EFFTLSKSYNMAGWRIGFMVGNKTLVSALA YNMAGWRIGFMVGNKTLVSALARIKSYHDY R I G N K T 0 0 1 0 0 0 0 2 0 1 0 1 1 1 0 0 0 0 0 1 0 0 8 0 0 0 864.45276 P77434 P77434 253 260 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 0.0025732 80.294 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 88477000 24780000 26030000 0 0 17957000 19710000 0 0 2013 433 2180 11743;11744;11745;11746 9030;9031;9032;9033 9031 4 24780000 26644000 0 0 21662000 21834000 0 0 IGGDRFDEAIINYVR AVISLNGVVYSSSVRIGGDRFDEAIINYVR IGGDRFDEAIINYVRRNYGSLIGEATAERI R I G V R R 1 2 1 2 0 0 1 2 0 3 0 0 0 1 0 0 0 0 1 1 0 0 15 1 1 1 1736.8846 P0A9X4 P0A9X4 189 203 mreB Rod shape-determining protein MreB yes yes 3 7.8437E-05 66.285 By MS/MS By MS/MS By MS/MS 1 1 1 9278700 4563400 0 0 0 4715300 0 0 0 2014 180 2181 11747;11748;11749 9034;9035;9036 9034 3 4563400 0 0 0 5688100 0 0 0 IGHLDEVTHIISDER LLIDKSKFNRSGEARIGHLDEVTHIISDER IGHLDEVTHIISDERQVATSLVTA______ R I G E R Q 0 1 0 2 0 0 2 1 2 3 1 0 0 0 0 1 1 0 0 1 0 0 15 0 2 0 1732.8744 P0ACK8 P0ACK8 220 234 fucR L-fucose operon activator yes yes 3;4 4.8757E-24 127.75 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 318990000 81517000 111840000 0 0 41640000 83994000 0 0 2015 214 2182 11750;11751;11752;11753;11754;11755;11756;11757 9037;9038;9039;9040;9041;9042;9043;9044 9038 8 81517000 114480000 0 0 50231000 93047000 0 0 IGLATVYRVLNQFDDAGIVTRHNFE SAEDLYKRLIDMGEEIGLATVYRVLNQFDD NQFDDAGIVTRHNFEGGKSVFELTQQHHHD E I G F E G 2 2 2 2 0 1 1 2 1 2 2 0 0 2 0 0 2 0 1 3 0 0 25 2 0 2 2847.4668 P0A9A9 P0A9A9 50 74 fur Ferric uptake regulation protein yes yes 3;4 0 322.59 By MS/MS By MS/MS 2 2 181080000 0 0 0 0 74617000 106460000 0 0 2016 162 2183 11758;11759;11760;11761 9045;9046;9047;9048 9045 4 0 0 0 0 1148800000 1613600000 0 0 IGLLLDMPLRDIER SPTAHIWFLKSLPSRIGLLLDMPLRDIERV RIGLLLDMPLRDIERVLYFESYVVIEGGMT R I G E R V 0 2 0 2 0 0 1 1 0 2 4 0 1 0 1 0 0 0 0 0 0 0 14 1 1 1 1652.9284 P0A8T7 P0A8T7 124 137 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 7.0982E-05 68.809 By MS/MS By MS/MS By MS/MS 1 1 1 51595000 0 24672000 0 0 11258000 15664000 0 0 2017 153 2184 11762;11763;11764 9049;9050;9051 9049 3 0 25255000 0 0 13581000 17352000 0 0 IGLPGTR VLERSNAVDLIVSDKIGLPGTRRVVGAWVW VDLIVSDKIGLPGTRRVVGAWVWNRNKETV K I G T R R 0 1 0 0 0 0 0 2 0 1 1 0 0 0 1 0 1 0 0 0 0 0 7 0 0 1 712.42317 P10902 P10902 171 177 nadB L-aspartate oxidase yes yes 2 0.0052694 47.743 By MS/MS By MS/MS By MS/MS 1 1 1 88447000 52826000 35622000 0 0 0 0 0 0 2018 274 2185 11765;11766;11767 9052;9053;9054 9054 3 52826000 36463000 0 0 0 0 0 0 IGMLAETDIVEAVAER QLDSVFSDVRIDTTKIGMLAETDIVEAVAE GMLAETDIVEAVAERLQRYQIQNVVLDTVM K I G E R L 3 1 0 1 0 0 3 1 0 2 1 0 1 0 0 0 1 0 0 2 0 0 16 0 3 3 1715.8764 P76422 P76422 78 93 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 9.4995E-251 248.32 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 399700000 88312000 77711000 0 0 89922000 143750000 0 0 2019 425 2186;2187 11768;11769;11770;11771;11772;11773;11774;11775 9055;9056;9057;9058;9059;9060;9061;9062;9063;9064 9064 324 10 88312000 79545000 0 0 108470000 159250000 0 0 IGNTEMPSR KTVWEEVSGGLDIMKIGNTEMPSRAYVGRF GLDIMKIGNTEMPSRAYVGRFNFKGVDQGK K I G S R A 0 1 1 0 0 0 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 0 9 0 1 1 1003.4757 P0A9W3 P0A9W3 417 425 ettA Energy-dependent translational throttle protein EttA yes yes 2 0.021297 49.418 By MS/MS By MS/MS 1 1 2870800 0 1548600 0 0 0 1322300 0 0 2020 177 2188 11776;11777 9065 9065 0 0 1585100 0 0 0 1464800 0 0 IGQIVGCSRE MTHPDGMQIKITRQEIGQIVGCSRETVGRI ITRQEIGQIVGCSRETVGRILKMLEDQNLI E I G R E T 0 1 0 0 1 1 1 2 0 2 0 0 0 0 0 1 0 0 0 1 0 0 10 1 0 0 1117.555 P0ACJ8 P0ACJ8 173 182 crp cAMP-activated global transcriptional regulator CRP yes yes 2 9.3502E-06 111.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 995860000 54300000 60991000 201090000 199710000 31513000 35293000 162150000 250810000 2021 213 2189 11778;11779;11780;11781;11782;11783;11784;11785 9066;9067;9068;9069 9066 4 834300000 930120000 1708600000 1514100000 485170000 534920000 1248000000 1439400000 IGRTTDPVRMYMRE AAEAAAQVLSSVESEIGRTTDPVRMYMREM EIGRTTDPVRMYMREMGTVELLTREGEIDI E I G R E M 0 3 0 1 0 0 1 1 0 1 0 0 2 0 1 0 2 0 1 1 0 0 14 3 0 1 1723.8498 P00579 P00579 91 104 rpoD RNA polymerase sigma factor RpoD yes yes 3;4 6.5689E-05 67.115 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 4 3 3 3 4 4 1841600000 358860000 326210000 50604000 38391000 158240000 188810000 235860000 484610000 2022 27 2190;2191 11786;11787;11788;11789;11790;11791;11792;11793;11794;11795;11796;11797;11798;11799;11800;11801;11802;11803;11804;11805;11806;11807;11808;11809;11810 9070;9071;9072;9073;9074;9075;9076;9077;9078;9079 9072 54;55 10 5513800000 4974700000 429980000 291060000 2436200000 2861700000 1815200000 2781100000 IGSDAYNQGLSER DPKDGSVVVLGYTDRIGSDAYNQGLSERRA DRIGSDAYNQGLSERRAQSVVDYLISKGIP R I G E R R 1 1 1 1 0 1 1 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 13 0 1 1 1408.6583 P0A910 P0A910 264 276 ompA Outer membrane protein A yes yes 2 2.3733E-101 195.51 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 73800000 15608000 17786000 0 0 20259000 20147000 0 0 2023 158 2192 11811;11812;11813;11814 9080;9081;9082;9083 9083 4 15608000 18206000 0 0 24439000 22318000 0 0 IGSDEMWDR FEKIVVKLSTRPEKRIGSDEMWDRAEADLA TRPEKRIGSDEMWDRAEADLAVALEENNIP R I G D R A 0 1 0 2 0 0 1 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 9 0 1 0 1107.4655 P0A8M3 P0A8M3 428 436 thrS Threonine--tRNA ligase yes yes 2 0.00018036 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36863000 11533000 7517000 0 0 7884500 9928700 0 0 2024 147 2193 11815;11816;11817;11818 9084;9085;9086;9087 9085 4 11533000 7694400 0 0 9511100 10999000 0 0 IGTRIFGP DGNACVLLNNNSEQPIGTRIFGPVTRELRS NNNSEQPIGTRIFGPVTRELRSEKFMKIIS P I G G P V 0 1 0 0 0 0 0 2 0 2 0 0 0 1 1 0 1 0 0 0 0 0 8 1 0 0 859.49159 P0ADY3 P0ADY3 95 102 rplN 50S ribosomal protein L14 yes yes 2 0.004575 98.457 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 148580000 28824000 37105000 0 0 13383000 69267000 0 0 2025 228 2194 11819;11820;11821;11822 9088;9089;9090 9090 1 174000000 222080000 0 0 19053000 98740000 0 0 IGVLVAAK ALEGDVLGSYQHGARIGVLVAAKGADEELV SYQHGARIGVLVAAKGADEELVKHIAMHVA R I G A K G 2 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 0 2 769.50617 P0A6P1 P0A6P1 152 159 tsf Elongation factor Ts yes yes 2 0.0041962 64.803 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24443000 4482900 4306400 0 0 7906100 7747100 0 0 2026 77 2195 11823;11824;11825;11826 9091;9092;9093 9092 3 4482900 4408100 0 0 9537200 8582100 0 0 IGVMFGNPETTTGGNALK QSNTLLIFINQIRMKIGVMFGNPETTTGGN MFGNPETTTGGNALKFYASVRLDIRRIGAV K I G L K F 1 0 2 0 0 0 1 4 0 1 1 1 1 1 1 0 3 0 0 1 0 0 18 0 1 2 1805.8982 P0A7G6 P0A7G6 200 217 recA Protein RecA yes yes 2 1.0112E-35 127.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36456000 8846900 9979500 0 0 8297400 9332200 0 0 2027 104 2196 11827;11828;11829;11830 9094;9095;9096;9097 9096 4 8846900 10215000 0 0 10009000 10338000 0 0 IGVPFVDGGVIK EFAEVLMIANGEEVKIGVPFVDGGVIKAEV EVKIGVPFVDGGVIKAEVVAHGRGEKVKIV K I G I K A 0 0 0 1 0 0 0 3 0 2 0 1 0 1 1 0 0 0 0 3 0 0 12 0 0 1 1199.6914 P0AG48 P0AG48 49 60 rplU 50S ribosomal protein L21 yes yes 2 5.8253E-07 100.48 By matching By MS/MS By MS/MS By matching 1 1 1 1 243470000 63189000 60054000 0 0 44426000 75802000 0 0 2028 258 2197 11831;11832;11833;11834 9098;9099 9098 2 63189000 61471000 0 0 53591000 83972000 0 0 IHAEVPLSEMFGYATQLR RGMLKGQESEVTGVKIHAEVPLSEMFGYAT EVPLSEMFGYATQLRSLTKGRASYTMEFLK K I H L R S 2 1 0 0 0 1 2 1 1 1 2 0 1 1 1 1 1 0 1 1 0 0 18 0 2 3 2061.0353 P0A6M8 P0A6M8 654 671 fusA Elongation factor G yes yes 3 1.7853E-31 102.58 By MS/MS By MS/MS By matching 1 1 1 55097000 0 14566000 0 0 16591000 23939000 0 0 2029 76 2198 11835;11836;11837 9100;9101 9100 0 0 14910000 0 0 20014000 26519000 0 0 IHAVSIK QTVYGPLMEYIADNRIHAVSIKAYTPAEWA MEYIADNRIHAVSIKAYTPAEWARDRKLNG R I H I K A 1 0 0 0 0 0 0 0 1 2 0 1 0 0 0 1 0 0 0 1 0 0 7 0 0 1 766.47012 P0A9W6 P0A9W6 62 68 ibaG Acid stress protein IbaG yes yes 2 4.2528E-17 138.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 550570000 151990000 165350000 0 0 124550000 108690000 0 0 2030 178 2199 11838;11839;11840;11841 9102;9103;9104;9105 9102 4 151990000 169250000 0 0 150250000 120400000 0 0 IHENGYNFK AHSLVGTPYYMSPERIHENGYNFKSDIWSL YMSPERIHENGYNFKSDIWSLGCLLYEMAA R I H F K S 0 0 2 0 0 0 1 1 1 1 0 1 0 1 0 0 0 0 1 0 0 0 9 0 1 0 1120.5302 GST-Nek6 GST-Nek6 450 458 yes yes 2;3 2.4848E-27 173.48 By MS/MS By MS/MS 2 2 120710000 0 0 0 0 60157000 60558000 0 0 2031 23 2200 11842;11843;11844;11845 9106;9107;9108;9109 9108 4 0 0 0 0 72567000 67085000 0 0 IHHAYLFSGTR EHVLTALANGLSLGRIHHAYLFSGTRGVGK SLGRIHHAYLFSGTRGVGKTSIARLLAKGL R I H T R G 1 1 0 0 0 0 0 1 2 1 1 0 0 1 0 1 1 0 1 0 0 0 11 0 0 1 1300.6677 P06710 P06710 37 47 dnaX DNA polymerase III subunit tau yes yes 3 7.4842E-06 99.568 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 98071000 25046000 34189000 0 0 16720000 22116000 0 0 2032 51 2201 11846;11847;11848;11849 9110;9111;9112;9113 9111 4 25046000 34996000 0 0 20169000 24499000 0 0 IHQNLVGVSNHRTLE VTDLVMLDLKQMNDEIHQNLVGVSNHRTLE IHQNLVGVSNHRTLEFAKYLANKNVKVWIR E I H L E F 0 1 2 0 0 1 1 1 2 1 2 0 0 0 0 1 1 0 0 2 0 0 15 1 0 0 1715.9067 P0A9N4 P0A9N4 138 152 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3;4 2.0419E-59 165.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 2 2 188620000 18437000 20554000 18884000 8257500 10923000 10471000 51204000 49893000 2033 171 2202 11850;11851;11852;11853;11854;11855;11856;11857;11858;11859;11860;11861;11862;11863;11864 9114;9115;9116;9117;9118;9119;9120;9121 9114 8 283280000 313450000 160460000 62605000 168170000 158710000 394080000 286330000 IHSEEDERPIGR IKVQRGRGYVPASTRIHSEEDERPIGRLLV STRIHSEEDERPIGRLLVDACYSPVERIAY R I H G R L 0 2 0 1 0 0 3 1 1 2 0 0 0 0 1 1 0 0 0 0 0 0 12 1 3 1 1436.7008 P0A7Z4 P0A7Z4 159 170 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3;4 4.5433E-10 111.63 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 81046000 22461000 28105000 0 0 16277000 14204000 0 0 2034 135 2203 11865;11866;11867;11868;11869;11870;11871;11872 9122;9123;9124;9125;9126;9127;9128;9129 9124 8 22461000 28768000 0 0 19635000 15735000 0 0 IHSFESCGTVDGPGIR ______________________________ HSFESCGTVDGPGIRFITFFQGCLMRCLYC R I H I R F 0 1 0 1 1 0 1 3 1 2 0 0 0 1 1 2 1 0 0 1 0 0 16 0 1 1 1730.8046 P0A9N4 P0A9N4 7 22 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3 1.3064E-17 103.3 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 53888000 15487000 10175000 0 0 10895000 12477000 1007400 3847500 2035 171 2204 11873;11874;11875;11876;11877;11878 9130;9131;9132;9133 9131 4 15487000 10415000 0 0 13142000 13822000 7753100 22080000 IHYLSAIEE ETPYRKVTDGVVTDEIHYLSAIEEGNYVIA GVVTDEIHYLSAIEEGNYVIAQANSNLDEE E I H E E G 1 0 0 0 0 0 2 0 1 2 1 0 0 0 0 1 0 0 1 0 0 0 9 0 1 1 1073.5393 P0A8V2 P0A8V2 603 611 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0012017 99.919 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 32759000 3556300 3848500 3967200 5124500 2610100 6359300 0 7292700 2036 154 2205 11879;11880;11881;11882;11883;11884;11885;11886 9134;9135 9135 2 54641000 58691000 33708000 38852000 40186000 36083000 0 41851000 IIAADNGDAWVEVK QDEEVQRDVSIMPFKIIAADNGDAWVEVKG KIIAADNGDAWVEVKGQKMAPPQISAEVLK K I I V K G 3 0 1 2 0 0 1 1 0 2 0 1 0 0 0 0 0 1 0 2 0 0 14 0 1 3 1499.762 P0A6Y8 P0A6Y8 93 106 dnaK Chaperone protein DnaK yes yes 2 2.6356E-23 94.465 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 2037 86 2206 11887;11888;11889 9136;9137;9138 9136 3 0 0 0 0 0 0 0 0 IIAATIENAQPILQIDNAR DYSPYFKTIEDLRNKIIAATIENAQPILQI TIENAQPILQIDNARLAADDFRTKYEHELA K I I A R L 4 1 2 1 0 2 1 0 0 5 1 0 0 0 1 0 1 0 0 0 0 0 19 0 1 5 2063.1375 CON__P08779 CON__P08779 178 196 yes yes 2;3 1.3179E-05 85.258 By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 10075000 2510900 2006000 0 0 1438800 4119600 0 0 + 2038 10 2207 11890;11891;11892;11893;11894 9139;9140 9140 1 2510900 2053300 0 0 1735700 4563500 0 0 IIAFEAIVQK DHFAFHPIVDPLSRRIIAFEAIVQKNEDSP PLSRRIIAFEAIVQKNEDSPSAIAVGQRKD R I I Q K N 2 0 0 0 0 1 1 0 0 3 0 1 0 1 0 0 0 0 0 1 0 0 10 0 1 2 1130.6699 P75990 P75990 187 196 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 4.1812E-05 103.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12309000 3093800 2553200 0 0 3676500 2985100 0 0 2039 414 2208 11895;11896;11897;11898 9141;9142;9143 9142 3 3093800 2613500 0 0 4434900 3306900 0 0 IIAFHNAFHGR ARHYACVRHSPFKTKIIAFHNAFHGRSLFT FKTKIIAFHNAFHGRSLFTVSVGGQPKYSD K I I G R S 2 1 1 0 0 0 0 1 2 2 0 0 0 2 0 0 0 0 0 0 0 0 11 0 0 2 1281.6731 P18335 P18335 134 144 argD Acetylornithine/succinyldiaminopimelate aminotransferase yes yes 3 0.00074307 66.19 By matching By MS/MS By matching By matching 1 1 1 1 18919000 4666900 8023100 0 0 2671300 3558000 0 0 2040 291 2209 11899;11900;11901;11902 9144 9144 0 4666900 8212400 0 0 3222400 3941500 0 0 IIAIDNSPAMIER ATLSVRRNIHHDNCKIIAIDNSPAMIERCR CKIIAIDNSPAMIERCRRHIDAYKAPTPVD K I I E R C 2 1 1 1 0 0 1 0 0 4 0 0 1 0 1 1 0 0 0 0 0 0 13 0 1 3 1441.7599 P76290 P76290 85 97 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2 1.2733E-05 68.536 By MS/MS By MS/MS By MS/MS 1 1 1 34409000 12676000 12392000 0 0 9341600 0 0 0 2041 421 2210 11903;11904;11905 9145 9145 0 12676000 12684000 0 0 11269000 0 0 0 IIAPEGSDNAFQTSNPK EWLAKHSVELDSQGRIIAPEGSDNAFQTSN APEGSDNAFQTSNPKIFAGGDIVRGSDLVV R I I P K I 2 0 2 1 0 1 1 1 0 2 0 1 0 1 2 2 1 0 0 0 0 0 17 0 1 4 1787.869 P09832 P09832 422 438 gltD Glutamate synthase [NADPH] small chain yes yes 2 0.0010191 52.555 By MS/MS By matching 1 1 17851000 8967700 8883500 0 0 0 0 0 0 2042 65 2211 11906;11907 9146 9146 1 8967700 9093100 0 0 0 0 0 0 IIAVIDR LRVNQSDISDAQIKKIIAVIDRAAFDITQL ISDAQIKKIIAVIDRAAFDITQLD______ K I I D R A 1 1 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 7 0 0 1 798.49634 P64588 P64588 192 198 yqjI Transcriptional regulator YqjI yes yes 2 0.0015291 100.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 828150000 254970000 249860000 0 0 93938000 225020000 0 4369800 2043 398 2212 11908;11909;11910;11911;11912;11913;11914;11915 9147;9148;9149;9150 9150 4 749910000 758910000 0 0 113320000 287760000 0 25077000 IIAVLEPR ATLAALRGKVGGTARIIAVLEPRSNTMKMG KVGGTARIIAVLEPRSNTMKMGICKDDLAP R I I P R S 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1 2 909.56475 P37773 P37773 354 361 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.00058337 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 135180000 39285000 30662000 0 0 27289000 37944000 0 0 2044 360 2213 11916;11917;11918;11919;11920;11921;11922;11923 9151;9152;9153;9154;9155 9153 5 42063000 34964000 0 0 34130000 43023000 0 0 IIDDAVAR VRDICQCEALWTPAKIIDDAVARIREQVGD ALWTPAKIIDDAVARIREQVGDDKVILGLS K I I A R I 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 8 0 0 2 871.47633 P04079 P04079 213 220 guaA GMP synthase [glutamine-hydrolyzing] yes yes 2 0.001618 91.906 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 715090000 25412000 22629000 105960000 140660000 17740000 16407000 161950000 224330000 2045 44 2214 11924;11925;11926;11927;11928;11929;11930;11931;11932;11933;11934;11935 9156;9157;9158;9159 9156 4 310930000 288440000 900350000 1066400000 211000000 248670000 1246400000 1287400000 IIDQEVK RSVAKAKHMSDETARIIDQEVKALIERNYN HMSDETARIIDQEVKALIERNYNRARQLLT R I I V K A 0 0 0 1 0 1 1 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 7 0 1 0 843.47018 P0AAI3 P0AAI3 544 550 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 2 0.0039588 50.632 By MS/MS 1 0 0 0 0 0 0 0 0 0 2046 185 2215 11936 9160 9160 1 0 0 0 0 0 0 0 0 IIEFNQNPLYSDHSR WGTIPSKALRHAVSRIIEFNQNPLYSDHSR IIEFNQNPLYSDHSRLLRSSFADILNHADN R I I S R L 0 1 2 1 0 1 1 0 1 2 1 0 0 1 1 2 0 0 1 0 0 0 15 0 1 1 1831.8853 P27306 P27306 63 77 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 1.4387E-77 150.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 272610000 91923000 78309000 0 0 44333000 58044000 0 0 2047 323 2216 11937;11938;11939;11940 9161;9162;9163;9164 9161 4 91923000 80157000 0 0 53479000 64300000 0 0 IIENAGNR RCFTDIRDGIEALYRIIENAGNRCDGEIIN GIEALYRIIENAGNRCDGEIINIGNPENEA R I I N R C 1 1 2 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1 1 885.46683 P77398 P77398 550 557 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 2.3624E-34 154.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 5708300000 1494100000 2193500000 0 0 1074800000 945830000 0 0 2048 432 2217 11941;11942;11943;11944;11945 9165;9166;9167;9168;9169;9170;9171;9172;9173;9174;9175;9176;9177;9178;9179;9180 9173 16 1494100000 2245300000 0 0 1296600000 1047800000 0 0 IIFASRRRDDLVP PPRVAEQLCRLLRLAIIFASRRRDDLVPEM LAIIFASRRRDDLVPEMTLQANHELLTLTL A I I V P E 1 3 0 2 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 13 3 0 1 1556.8787 P25552 P25552 435 447 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 3 0.0017307 62.408 By MS/MS 1 6099400 0 0 0 0 0 6099400 0 0 2049 316 2218 11946 9181;9182 9181 2 0 0 0 0 0 8694700 0 0 IIFPSTSEVYGMCSDK ENLRIIRYCVKYRKRIIFPSTSEVYGMCSD IFPSTSEVYGMCSDKYFDEDHSNLIVGPVN R I I D K Y 0 0 0 1 1 0 1 1 0 2 0 1 1 1 1 3 1 0 1 1 0 0 16 0 1 1 1832.8325 P77398 P77398 427 442 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 2.7015E-116 196.27 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2814500000 610550000 594070000 0 0 720090000 889800000 0 0 2050 432 2219;2220 11947;11948;11949;11950;11951;11952;11953;11954 9183;9184;9185;9186;9187;9188;9189;9190 9188 332 8 610550000 608090000 0 0 868640000 985700000 0 0 IIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPR ENLRIIRYCVKYRKRIIFPSTSEVYGMCSD EDHSNLIVGPVNKPRWIYSVSKQLLDRVIW R I I P R W 0 1 2 3 1 0 2 2 1 3 1 2 1 2 3 4 1 0 2 3 0 0 34 2 2 3 3913.8655 P77398 P77398 427 460 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 4;5 2.9562E-137 174.41 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 2237600000 383420000 366060000 0 0 748560000 739550000 0 0 2051 432 2221;2222 11955;11956;11957;11958;11959;11960;11961;11962;11963;11964;11965;11966;11967;11968;11969;11970 9191;9192;9193;9194;9195;9196;9197;9198;9199;9200;9201;9202;9203;9204;9205;9206;9207;9208;9209;9210 9203 332 20 383420000 374700000 0 0 902990000 819250000 0 0 IIGALPYLYEINLR KTANDFYIPEDEPFKIIGALPYLYEINLRR KIIGALPYLYEINLRRFLSRLQYYVNTDQL K I I L R R 1 1 1 0 0 0 1 1 0 3 3 0 0 0 1 0 0 0 2 0 0 0 14 0 1 2 1646.9396 P23830 P23830 316 329 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.0026201 56.404 By MS/MS By MS/MS By matching By matching 1 1 1 1 25952000 7458800 6028600 0 0 6430300 6034100 0 0 2052 304 2223 11971;11972;11973;11974 9211 9211 1 7458800 6170900 0 0 7756900 6684500 0 0 IIGIDLGTTNSCVAIMDGTTPR ______________________________ TTNSCVAIMDGTTPRVLENAEGDRTTPSII K I I P R V 1 1 1 2 1 0 0 3 0 4 1 0 1 0 1 1 4 0 0 1 0 0 22 0 0 2 2304.1454 P0A6Y8 P0A6Y8 4 25 dnaK Chaperone protein DnaK yes yes 2 5.6272E-46 134.24 By matching By matching By MS/MS By MS/MS 1 1 1 1 21719000 2188700 2295800 0 0 8527000 8707500 0 0 2053 86 2224 11975;11976;11977;11978 9212;9213 9213 2 2188700 2350000 0 0 10286000 9646000 0 0 IIGIHGGDPLMTK VVVTGEMDYVTDGHRIIGIHGGDPLMTKVV HRIIGIHGGDPLMTKVVGTGCALSAVVAAC R I I T K V 0 0 0 1 0 0 0 3 1 3 1 1 1 0 1 0 1 0 0 0 0 0 13 0 0 1 1350.733 P76423 P76423 183 195 thiM Hydroxyethylthiazole kinase yes yes 2;3 6.5298E-119 227.94 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 2737200000 800260000 622520000 0 0 708550000 605830000 0 0 2054 426 2225;2226 11979;11980;11981;11982;11983;11984;11985;11986;11987;11988;11989;11990;11991;11992;11993;11994 9214;9215;9216;9217;9218;9219;9220;9221;9222;9223;9224;9225;9226;9227;9228;9229 9225 329 16 800260000 637210000 0 0 854730000 671120000 0 0 IIGREIIDSR ______________________________ SKIVKIIGREIIDSRGNPTVEAEVHLEGGF K I I S R G 0 2 0 1 0 0 1 1 0 4 0 0 0 0 0 1 0 0 0 0 0 0 10 1 1 0 1170.6721 P0A6P9 P0A6P9 7 16 eno Enolase yes yes 2 8.7826E-06 88.942 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10173000 0 4661400 0 0 5511900 0 0 0 2055 79 2227 11995;11996;11997;11998 9230;9231;9232;9233;9234 9230 5 0 4771400 0 0 6649000 0 0 0 IIIDAKCE TNWLEGAVERNRMGEIIIDAKCETNVKGVF ERNRMGEIIIDAKCETNVKGVFAAGDCTTV E I I C E T 1 0 0 1 1 0 1 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 8 1 0 1 960.49502 P35340 P35340 470 477 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.012644 63.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 125190000 26541000 34723000 0 0 11475000 12656000 0 39795000 2056 348 2228 11999;12000;12001;12002;12003;12004 9235;9236;9237;9238 9238 4 407800000 529530000 0 0 169880000 191830000 0 228380000 IIIDDAAEVAR FVVHTLGENARRHYRIIIDDAAEVARQMKK RHYRIIIDDAAEVARQMKKSMPLVKENRRD R I I A R Q 3 1 0 2 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 11 0 1 3 1184.6401 P0ADR8 P0ADR8 317 327 ygdH LOG family protein YgdH yes yes 2 0.00016027 82.749 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 31865000 8167200 5468700 0 2738500 5910300 9580300 0 0 2057 225 2229 12005;12006;12007;12008;12009 9239;9240;9241;9242 9239 4 8167200 5597800 0 20762000 7129600 10613000 0 0 IIKTTLPKAKE QAMFRNMAGSLVRHEIIKTTLPKAKELRRV VRHEIIKTTLPKAKELRRVVEPLITLAKTD E I I K E L 1 0 0 0 0 0 1 0 0 2 1 3 0 0 1 0 2 0 0 0 0 0 11 3 0 2 1240.7755 P0AG44 P0AG44 33 43 rplQ 50S ribosomal protein L17 yes yes 3;4 0.0001745 73.435 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 2 48190000 0 1780100 6124700 2817100 943930 1671200 14871000 19983000 2058 257 2230 12010;12011;12012;12013;12014;12015;12016;12017;12018;12019 9243;9244;9245 9245 3 0 27147000 52041000 21358000 14533000 25329000 114450000 114680000 IILAGGELR NLNVANTLMVKEDFRIILAGGELRSRDGGI VKEDFRIILAGGELRSRDGGIIGEATLDFI R I I L R S 1 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1 1 940.57057 P0ACL0 P0ACL0 137 145 glpR Glycerol-3-phosphate regulon repressor yes yes 2 1.7741E-09 122.13 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 869420000 305650000 224590000 2160200 2602000 147120000 180050000 2874300 4385000 2059 215 2231 12020;12021;12022;12023;12024;12025;12026;12027;12028 9246;9247;9248;9249 9248 4 313890000 229890000 18355000 19727000 177470000 199460000 22121000 25165000 IILPVNDGR AETASPEVMADCPRRIILPVNDGRLIAINA ADCPRRIILPVNDGRLIAINAENGKLCETF R I I G R L 0 1 1 1 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 1 0 0 9 0 0 1 995.57638 P15877 P15877 290 298 gcd Quinoprotein glucose dehydrogenase yes yes 2 0.0025679 50.607 By MS/MS 1 0 0 0 0 0 0 0 0 0 2060 284 2232 12029 9250 9250 1 0 0 0 0 0 0 0 0 IIMDQHEE SSKEQKTPEGQAPEEIIMDQHEEIEAVEPE EGQAPEEIIMDQHEEIEAVEPEASAEQVDP E I I E E I 0 0 0 1 0 1 2 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 8 0 1 0 1013.4488 P09372 P09372 17 24 grpE Protein GrpE yes yes 2 0.014257 47.067 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 26902000 6953600 7048100 3592500 3314700 3040000 2953200 0 0 2061 62 2233 12030;12031;12032;12033;12034;12035 9251 9251 0 106840000 107480000 30525000 25131000 46804000 44760000 0 0 IINEPTAAALAYGLDK ATKDAGRIAGLEVKRIINEPTAAALAYGLD INEPTAAALAYGLDKGTGNRTIAVYDLGGG R I I D K G 4 0 1 1 0 0 1 1 0 2 2 1 0 0 1 0 1 0 1 0 0 0 16 0 1 5 1658.8879 P0A6Y8 P0A6Y8 168 183 dnaK Chaperone protein DnaK yes yes 2;3 8.9793E-36 159.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 1344100000 385070000 271120000 0 0 311530000 376390000 0 0 2062 86 2234 12036;12037;12038;12039;12040;12041;12042;12043 9252;9253;9254;9255;9256;9257;9258;9259 9253 8 385070000 277520000 0 0 375800000 416950000 0 0 IINEPTAAALAYGLDKGTGNR ATKDAGRIAGLEVKRIINEPTAAALAYGLD AAALAYGLDKGTGNRTIAVYDLGGGTFDIS R I I N R T 4 1 2 1 0 0 1 3 0 2 2 1 0 0 1 0 2 0 1 0 0 0 21 1 1 5 2144.1226 P0A6Y8 P0A6Y8 168 188 dnaK Chaperone protein DnaK yes yes 3 1.3082E-09 72.771 By MS/MS By matching By matching 1 1 1 32573000 0 23940000 0 0 5272000 3361700 0 0 2063 86 2235 12044;12045;12046 9260 9260 1 0 24505000 0 0 6359700 3724000 0 0 IINIGNPENE LYRIIENAGNRCDGEIINIGNPENEASIEE RCDGEIINIGNPENEASIEELGEMLLASFE E I I N E A 0 0 3 0 0 0 2 1 0 3 0 0 0 0 1 0 0 0 0 0 0 0 10 0 1 1 1111.551 P77398 P77398 562 571 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.00010507 89.046 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 438800000 47026000 55179000 50200000 44658000 36220000 65944000 72506000 67066000 2064 432 2236 12047;12048;12049;12050;12051;12052;12053;12054;12055 9261;9262;9263;9264;9265;9266 9261 6 722540000 841490000 426540000 338570000 557630000 806280000 558030000 384880000 IINIHHSFLPAFIGAR MRVLTPEFVARFPNKIINIHHSFLPAFIGA INIHHSFLPAFIGARPYHQAYERGVKIIGA K I I A R P 2 1 1 0 0 0 0 1 2 4 1 0 0 2 1 1 0 0 0 0 0 0 16 0 0 3 1805.0101 P37051 P37051 185 200 purU Formyltetrahydrofolate deformylase yes yes 3;4 5.7972E-11 82.925 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 59072000 14520000 11855000 0 0 16802000 15896000 0 0 2065 354 2237 12056;12057;12058;12059;12060;12061;12062;12063 9267;9268;9269;9270;9271;9272;9273;9274 9273 8 14520000 12134000 0 0 20268000 17609000 0 0 IISESGTAAGVR GGTHASRTGDIGLFRIISESGTAAGVRRIE LFRIISESGTAAGVRRIEAVTGEGAIATVH R I I V R R 2 1 0 0 0 0 1 2 0 2 0 0 0 0 0 2 1 0 0 1 0 0 12 0 1 2 1159.6197 P00957 P00957 682 693 alaS Alanine--tRNA ligase yes yes 2 4.6751E-08 103.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 31493000 8692000 8735000 0 0 6374200 7691900 0 0 2066 33 2238 12064;12065;12066;12067;12068 9275;9276;9277;9278 9275 3 8692000 8941100 0 0 7689300 8520900 0 0 IISHIDQFFIR SQELALKDDLPLLDRIISHIDQFFIRHQKK LLDRIISHIDQFFIRHQKKLERLTSIAITL R I I I R H 0 1 0 1 0 1 0 0 1 4 0 0 0 2 0 1 0 0 0 0 0 0 11 0 0 0 1387.7612 P50456 P50456 128 138 mlc Protein mlc yes yes 3 1.1395E-08 76.143 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7124000 0 7124000 0 0 0 0 0 0 2067 373 2239 12069;12070;12071;12072 9279;9280;9281;9282 9279 4 0 7292100 0 0 0 0 0 0 IISLAPEVL FGPVTRELRSEKFMKIISLAPEVL______ SEKFMKIISLAPEVL_______________ K I I V L - 1 0 0 0 0 0 1 0 0 2 2 0 0 0 1 1 0 0 0 1 0 0 9 0 1 2 953.57973 P0ADY3 P0ADY3 115 123 rplN 50S ribosomal protein L14 yes yes 1;2 1.2003E-35 123.99 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 3065700000 932240000 870210000 0 0 553400000 709850000 0 0 2068 228 2240 12073;12074;12075;12076;12077;12078;12079 9283;9284;9285 9284 2 932240000 890750000 0 0 667570000 786360000 0 0 IITAGGDPLYVAR VRGSAPDAALYWYARIITAGGDPLYVARRC ARIITAGGDPLYVARRCLAIASEDVGNADP R I I A R R 2 1 0 1 0 0 0 2 0 2 1 0 0 0 1 0 1 0 1 1 0 0 13 0 0 3 1344.7402 P0AAZ4 P0AAZ4 281 293 rarA Replication-associated recombination protein A yes yes 2 2.7727E-11 85.355 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33339000 9866400 14602000 0 0 8869900 0 0 0 2069 189 2241 12080;12081;12082;12083 9286;9287;9288;9289 9289 4 9866400 14947000 0 0 10700000 0 0 0 IITEGLKA AAGDGTTTATVLAQAIITEGLKAVAAGMNP ATVLAQAIITEGLKAVAAGMNPMDLKRGID A I I K A V 1 0 0 0 0 0 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 8 1 1 0 843.50657 P0A6F5 P0A6F5 99 106 groL 60 kDa chaperonin yes yes 2 0.0041359 88.029 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 53685000 4039400 5855400 0 0 22290000 21501000 0 0 2070 68 2242 12084;12085;12086;12087 9290;9291 9290 2 24384000 35045000 0 0 31733000 30649000 0 0 IITEGLKAVAA AAGDGTTTATVLAQAIITEGLKAVAAGMNP LAQAIITEGLKAVAAGMNPMDLKRGIDKAV A I I A A G 3 0 0 0 0 0 1 1 0 2 1 1 0 0 0 0 1 0 0 1 0 0 11 1 1 2 1084.6492 P0A6F5 P0A6F5 99 109 groL 60 kDa chaperonin yes yes 2 0.0011137 76.064 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 133080000 2510700 37864000 0 0 37434000 55268000 0 0 2071 68 2243 12088;12089;12090;12091;12092;12093;12094 9292;9293 9292 2 15156000 54377000 0 0 48083000 70305000 0 0 IITNSLR VEHVARALLNHNHLRIITNSLRVAHILYHN LLNHNHLRIITNSLRVAHILYHNPRFEVMV R I I L R V 0 1 1 0 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 7 0 0 0 815.4865 P32144 P32144 123 129 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 0.0041759 66.993 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18861000 5252800 5753300 0 0 4189600 3665200 0 0 2072 339 2244 12095;12096;12097;12098 9294;9295 9294 2 5252800 5889000 0 0 5054000 4060200 0 0 IIWPENDINLK KQFHHLVRIVPGQGRIIWPENDINLKQTMA GQGRIIWPENDINLKQTMAMGCWSEQELVG R I I L K Q 0 0 2 1 0 0 1 0 0 3 1 1 0 0 1 0 0 1 0 0 0 0 11 0 1 1 1353.7293 P37773 P37773 217 227 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 2.8236E-11 138.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 67521000 20865000 17419000 0 0 14256000 14980000 0 0 2073 360 2245 12099;12100;12101;12102 9296;9297;9298;9299;9300 9300 5 20865000 17831000 0 0 17197000 16594000 0 0 IKDVIGK EFAPRIHTIKINPDKIKDVIGKGGSVIRAL TIKINPDKIKDVIGKGGSVIRALTEETGTT K I K G K G 0 0 0 1 0 0 0 1 0 2 0 2 0 0 0 0 0 0 0 1 0 0 7 1 0 0 771.48544 P05055 P05055 565 571 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0063584 88.029 By MS/MS By MS/MS By MS/MS 1 1 1 14090000 4845700 0 0 0 4498400 4745500 0 0 2074 48 2246 12103;12104;12105 9301;9302 9301 2 4845700 0 0 0 5426400 5257000 0 0 IKELHQQYK ELKELLNKMVNLKEKIKELHQQYKEASEVK VNLKEKIKELHQQYKEASEVKPPRDITAEF K I K Y K E 0 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 0 1 0 0 0 9 1 1 0 1185.6506 LSD1-FL-His LSD1-FL-His 457 465 yes yes 2;3 1.0353E-90 205.12 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 2 22727000000 6619800000 8241900000 0 0 3600600000 4265100000 0 0 2075 24 2247 12106;12107;12108;12109;12110;12111;12112;12113;12114;12115;12116;12117;12118 9303;9304;9305;9306;9307;9308;9309;9310;9311;9312;9313;9314;9315;9316;9317 9308 15 6656300000 8453200000 0 0 4356700000 4724800000 0 0 IKEWYEK KVRALEESNYELEGKIKEWYEKHGNSHQGE SNYELEGKIKEWYEKHGNSHQGEPRDYSKY K I K E K H 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 7 1 2 0 994.51238 CON__P13645;CON__P02535-1 CON__P13645 178 184 yes no 2 5.6906E-05 116.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 186480000 22901000 22990000 0 0 58414000 82177000 0 0 + 2076 12 2248 12119;12120;12121;12122 9318;9319;9320;9321 9320 4 22901000 23532000 0 0 70465000 91033000 0 0 IKFEMEQNLR LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA LDDFRIKFEMEQNLRQGVDADINGLRQVLD R I K L R Q 0 1 1 0 0 1 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 10 1 2 0 1306.6704 CON__P35527 CON__P35527 241 250 yes yes 2;3 1.1969E-76 184.71 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 4 939630000 140250000 123170000 0 0 248970000 427230000 0 0 + 2077 15 2249;2250 12123;12124;12125;12126;12127;12128;12129;12130;12131;12132;12133;12134;12135 9322;9323;9324;9325;9326;9327;9328;9329;9330;9331;9332;9333;9334;9335;9336 9332 19 14 140250000 126080000 0 0 300330000 473280000 0 0 IKGEGEAEMLGFYEAMQNHTIK EVPDLELGGVLIALRIKGEGEAEMLGFYEA EMLGFYEAMQNHTIKLTPPAGKPMPIVIPS R I K I K L 2 0 1 0 0 1 4 3 1 2 1 2 2 1 0 0 1 0 1 0 0 0 22 1 4 2 2495.1825 P30177 P30177 51 72 ybiB Uncharacterized protein YbiB yes yes 3;4 1.627E-45 126.51 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 119690000 21416000 20465000 0 0 51856000 25949000 0 0 2078 332 2251 12136;12137;12138;12139;12140 9337;9338;9339;9340;9341 9339 5 21416000 20948000 0 0 62554000 28746000 0 0 IKGLVQPTR ______________________________ ILGYWKIKGLVQPTRLLLEYLEEKYEEHLY K I K T R L 0 1 0 0 0 1 0 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 9 1 0 1 1010.6237 GST-Nek6 GST-Nek6 10 18 yes yes 2 0.002576 90.657 By MS/MS By MS/MS 1 1 11193000 0 0 0 0 5454200 5738700 0 0 2079 23 2252 12141;12142 9342;9343 9342 2 0 0 0 0 6579400 6357200 0 0 IKHEIGSAYPGDEVR RRNYGSLIGEATAERIKHEIGSAYPGDEVR IKHEIGSAYPGDEVREIEVRGRNLAEGVPR R I K V R E 1 1 0 1 0 0 2 2 1 2 0 1 0 0 1 1 0 0 1 1 0 0 15 1 2 2 1669.8424 P0A9X4 P0A9X4 218 232 mreB Rod shape-determining protein MreB yes yes 3 0.0046592 35.527 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40847000 9321800 15360000 0 0 7397100 8768000 0 0 2080 180 2253 12143;12144;12145;12146 9344 9344 1 9321800 15723000 0 0 8923100 9713000 0 0 IKHTAIDGGTFQNEITDR DVVQALNLMSVLNPRIKHTAIDGGTFQNEI TAIDGGTFQNEITDRNVMGVPAVFVNGKEF R I K D R N 1 1 1 2 0 1 1 2 1 3 0 1 0 1 0 0 3 0 0 0 0 0 18 1 1 1 2015.0072 P35340 P35340 149 166 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3;4 0 225.11 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 761200000 228750000 255050000 0 0 143450000 133950000 0 0 2081 348 2254 12147;12148;12149;12150;12151;12152;12153;12154;12155;12156;12157;12158 9345;9346;9347;9348;9349;9350;9351;9352;9353;9354;9355 9350 11 228750000 261070000 0 0 173050000 148390000 0 0 IKHYAVLAGIDSEK SQRAQQMTRQTFWHRIKHYAVLAGIDSEKL RIKHYAVLAGIDSEKLSPHVLRHAFATHLL R I K E K L 2 0 0 1 0 0 1 1 1 2 1 2 0 0 0 1 0 0 1 1 0 0 14 1 1 2 1542.8406 P0A8P8 P0A8P8 227 240 xerD Tyrosine recombinase XerD yes yes 2;3 1.89E-14 96.414 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 270130000 81705000 68399000 0 0 53654000 66370000 0 0 2082 151 2255 12159;12160;12161;12162;12163;12164;12165;12166 9356;9357;9358;9359;9360;9361 9359 6 81705000 70013000 0 0 64723000 73523000 0 0 IKPLPTK YLERHGLINFGIYKRIKPLPTKKTGKVIII INFGIYKRIKPLPTKKTGKVIIIGSGVSGL R I K T K K 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 0 1 0 0 0 0 0 7 1 0 2 795.52182 LSD1-FL-His LSD1-FL-His 272 278 yes yes 2 2.2299E-11 134.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 17536000000 5174800000 4640000000 0 0 4170100000 3551200000 0 0 2083 24 2256 12167;12168;12169;12170;12171;12172;12173;12174;12175 9362;9363;9364;9365 9363 4 5196000000 4759700000 0 0 5078200000 3949800000 0 0 IKPLPTKK YLERHGLINFGIYKRIKPLPTKKTGKVIII NFGIYKRIKPLPTKKTGKVIIIGSGVSGLA R I K K K T 0 0 0 0 0 0 0 0 0 1 1 3 0 0 2 0 1 0 0 0 0 0 8 2 0 2 923.61679 LSD1-FL-His LSD1-FL-His 272 279 yes yes 2 0.0031114 101.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2089000000 671550000 779290000 0 0 317310000 320880000 0 0 2084 24 2257 12176;12177;12178;12179;12180;12181;12182;12183 9366;9367;9368;9369 9367 4 681430000 803170000 0 0 397210000 360800000 0 0 IKPQAVIETLWR WRARQCLKYDTHSEKIKPQAVIETLWRLTK SEKIKPQAVIETLWRLTKGDAYVTSDVGQH K I K W R L 1 1 0 0 0 1 1 0 0 2 1 1 0 0 1 0 1 1 0 1 0 0 12 1 1 2 1452.8453 P00893 P00893 372 383 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2;3 4.8669E-07 95.573 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 80821000 24501000 21937000 0 0 13845000 20537000 0 0 2085 29 2258 12184;12185;12186;12187;12188;12189;12190;12191 9370;9371;9372;9373;9374;9375;9376 9375 7 24501000 22455000 0 0 16702000 22750000 0 0 IKQDTIVHRPQR EDQALFRQLMAGTRKIKQDTIVHRPQRKKI TRKIKQDTIVHRPQRKKISEVPVKRLIQEQ K I K Q R K 0 2 0 1 0 2 0 0 1 2 0 1 0 0 1 0 1 0 0 1 0 0 12 2 0 1 1489.8477 P0A8B2 P0A8B2 25 36 yfcN UPF0115 protein YfcN yes yes 3 0.021882 29.936 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7450700 1738600 2881500 0 0 1527600 1302900 0 0 2086 142 2259 12192;12193;12194;12195 9377 9377 1 1738600 2949600 0 0 1842800 1443400 0 0 IKTLTHDTR IAFNEPASSLASRTRIKTLTHDTRVANSRF LASRTRIKTLTHDTRVANSRFFDNDVNQVP R I K T R V 0 1 0 1 0 0 0 0 1 1 1 1 0 0 0 0 3 0 0 0 0 0 9 1 0 0 1083.6037 P0A759 P0A759 159 167 nagB Glucosamine-6-phosphate deaminase yes yes 3 0.0061542 36.381 By MS/MS 1 0 0 0 0 0 0 0 0 0 2087 96 2260 12196 9378 9378 1 0 0 0 0 0 0 0 0 IKVPDIGADE ______________________________ ______________________________ E I K D E V 1 0 0 2 0 0 1 1 0 2 0 1 0 0 1 0 0 0 0 1 0 0 10 1 0 2 1055.5499 P06959 P06959 5 14 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.0048344 61.962 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 14593000 0 3559300 636310 685460 4536500 3776600 665740 733150 2088 53 2261 12197;12198;12199;12200;12201;12202;12203 9379;9380 9379 2 0 54280000 5406700 5196800 69844000 57240000 5123700 4207400 ILADIAVFDK FINGLKKASVEIDRKILADIAVFDKVAFTA EIDRKILADIAVFDKVAFTALVEKAKAALA K I L D K V 2 0 0 2 0 0 0 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 10 0 0 2 1103.6227 P0A7L3 P0A7L3 94 103 rplT 50S ribosomal protein L20 yes yes 2 0.0030835 61.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 154540000 36408000 31097000 0 0 37905000 49134000 0 0 2089 111 2262 12204;12205;12206;12207 9381;9382;9383;9384 9383 4 36408000 31831000 0 0 45725000 54430000 0 0 ILDAVDFPPER SHTAFTMGEFEECLKILDAVDFPPERILNV ECLKILDAVDFPPERILNVSPRRLLNFLES K I L E R I 1 1 0 2 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 11 0 1 3 1270.6558 P75914 P75914 208 218 ycdX Probable phosphatase YcdX yes yes 2 0.0068418 50.353 By MS/MS By MS/MS By MS/MS 1 1 1 8719700 2886300 3158000 0 0 2675500 0 0 0 2090 412 2263 12208;12209;12210 9385;9386;9387 9385 2 2886300 3232500 0 0 3227400 0 0 0 ILDVLIPPAK IEKNRYRAEELAEERILDVLIPPAKNNWGQ LAEERILDVLIPPAKNNWGQTEQQQEPSAA R I L A K N 1 0 0 1 0 0 0 0 0 2 2 1 0 0 2 0 0 0 0 1 0 0 10 0 0 3 1077.6798 P0A6H5 P0A6H5 131 140 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.00081667 71.692 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32492000 7128700 9292300 0 0 6748600 9322700 0 0 2091 71 2264 12211;12212;12213;12214 9388;9389;9390;9391 9391 4 7128700 9511600 0 0 8140800 10327000 0 0 ILEVLQEPDNHHVSAEDLYK ALKKAGLKVTLPRLKILEVLQEPDNHHVSA QEPDNHHVSAEDLYKRLIDMGEEIGLATVY K I L Y K R 1 0 1 2 0 1 3 0 2 1 3 1 0 0 1 1 0 0 1 2 0 0 20 0 3 2 2348.1648 P0A9A9 P0A9A9 22 41 fur Ferric uptake regulation protein yes yes 2;3;4 4.8657E-262 240.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 3 3 8021200000 2309000000 2117500000 0 0 1805500000 1789200000 0 0 2092 162 2265 12215;12216;12217;12218;12219;12220;12221;12222;12223;12224;12225;12226;12227 9392;9393;9394;9395;9396;9397;9398;9399;9400;9401;9402 9402 11 2309000000 2167500000 0 0 2178000000 1982100000 0 0 ILEVLQEPDNHHVSAEDLYKR ALKKAGLKVTLPRLKILEVLQEPDNHHVSA EPDNHHVSAEDLYKRLIDMGEEIGLATVYR K I L K R L 1 1 1 2 0 1 3 0 2 1 3 1 0 0 1 1 0 0 1 2 0 0 21 1 3 2 2504.266 P0A9A9 P0A9A9 22 42 fur Ferric uptake regulation protein yes yes 3;4;5 4.7251E-63 153.11 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 786530000 397810000 256520000 0 0 51907000 80300000 0 0 2093 162 2266 12228;12229;12230;12231;12232;12233;12234;12235;12236;12237;12238;12239 9403;9404;9405;9406;9407;9408;9409;9410;9411;9412;9413;9414;9415 9409 13 397810000 262570000 0 0 62616000 88954000 0 0 ILEVPVGR YADLAEGMKVKCTGRILEVPVGRGLLGRVV KVKCTGRILEVPVGRGLLGRVVNTLGAPID R I L G R G 0 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 2 0 0 8 0 1 1 881.53345 P0ABB0 P0ABB0 94 101 atpA ATP synthase subunit alpha yes yes 2 0.0023344 83.614 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34894000 5573800 6737700 0 0 8093500 14489000 0 0 2094 193 2267 12240;12241;12242;12243 9416;9417;9418;9419 9417 4 5573800 6896800 0 0 9763200 16051000 0 0 ILFENLTPLHANSR VNEVNFDKPENARNKILFENLTPLHANSRL KILFENLTPLHANSRLRMERGNGSTEDLTA K I L S R L 1 1 2 0 0 0 1 0 1 1 3 0 0 1 1 1 1 0 0 0 0 0 14 0 1 2 1623.8733 P0AG30 P0AG30 131 144 rho Transcription termination factor Rho yes yes 3 0.00010606 66.246 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34407000 12419000 7082200 0 0 8680100 6226100 0 0 2095 256 2268 12244;12245;12246;12247 9420;9421;9422;9423 9423 4 12419000 7249400 0 0 10471000 6897100 0 0 ILFVGTK EALAELNKIASRKGKILFVGTKRAASEAVK KIASRKGKILFVGTKRAASEAVKDAALSCD K I L T K R 0 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 0 0 1 0 0 7 0 0 0 776.47963 P0A7V0 P0A7V0 67 73 rpsB 30S ribosomal protein S2 yes yes 2 0.0025055 94.407 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 345690000 118350000 98067000 0 0 66832000 62446000 0 0 2096 128 2269 12248;12249;12250;12251 9424;9425;9426;9427 9424 4 118350000 100380000 0 0 80620000 69176000 0 0 ILFYTGVNHK ISAHIDAGKTTTTERILFYTGVNHKIGEVH TTTERILFYTGVNHKIGEVHDGAATMDWME R I L H K I 0 0 1 0 0 0 0 1 1 1 1 1 0 1 0 0 1 0 1 1 0 0 10 0 0 0 1190.6448 P0A6M8 P0A6M8 30 39 fusA Elongation factor G yes yes 3 0.00035575 69.915 By matching By MS/MS 1 1 16579000 0 0 0 0 8652100 7926800 0 0 2097 76 2270 12252;12253 9428 9428 1 0 0 0 0 10437000 8781100 0 0 ILGVSKTAEE ______________________________ QDYYEILGVSKTAEEREIRKAYKRLAMKYH E I L E E R 1 0 0 0 0 0 2 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 10 1 1 1 1045.5655 P08622 P08622 9 18 dnaJ Chaperone protein DnaJ yes yes 2 0.019226 61.962 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 17665000 4777900 3258200 0 0 1921000 2502900 0 5204800 2098 61 2271 12254;12255;12256;12257;12258 9429 9429 1 73412000 49688000 0 0 29576000 37935000 0 29869000 ILHAADATGR ESYHLTREGGHSHRRILHAADATGREVETT HSHRRILHAADATGREVETTLVSKALNHPN R I L G R E 3 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 10 0 0 3 1023.5461 P10902 P10902 129 138 nadB L-aspartate oxidase yes yes 2 2.4797E-10 119.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 90972000 36098000 24959000 0 0 13781000 16133000 0 0 2099 274 2272 12259;12260;12261;12262 9430;9431;9432;9433 9430 4 36098000 25548000 0 0 16625000 17872000 0 0 ILHHETNPGCAR EKVKGDKVLYAHASRILHHETNPGCARALM ASRILHHETNPGCARALMQKHGDRYVWINP R I L A R A 1 1 1 0 1 0 1 1 2 1 1 0 0 0 1 0 1 0 0 0 0 0 12 0 1 2 1403.6728 Q46861 Q46861 313 324 ygiQ UPF0313 protein YgiQ yes yes 3 2.9697E-07 90.614 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22837000 7667700 6575500 0 0 5345300 3248100 0 0 2100 441 2273 12263;12264;12265;12266 9434;9435;9436 9434 3 7667700 6730700 0 0 6448000 3598200 0 0 ILIASGVR INLYRRARDLKGIKKILIASGVRYDIAVED DLKGIKKILIASGVRYDIAVEDPRYIKELA K I L V R Y 1 1 0 0 0 0 0 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 8 0 0 1 827.52289 Q46861 Q46861 490 497 ygiQ UPF0313 protein YgiQ yes yes 2 0.0038324 66.799 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45765000 14552000 11523000 0 0 7450600 12239000 0 0 2101 441 2274 12267;12268;12269;12270 9437;9438;9439;9440 9437 4 14552000 11795000 0 0 8987700 13558000 0 0 ILIGSPLSK GRILAIMVNLFNPQKILIGSPLSKAADILF LFNPQKILIGSPLSKAADILFPVISDSIRQ K I L S K A 0 0 0 0 0 0 0 1 0 2 2 1 0 0 1 2 0 0 0 0 0 0 9 0 0 1 926.58007 P50456 P50456 338 346 mlc Protein mlc yes yes 2 0.0046222 58.981 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 16438000 5275300 4496100 0 0 2247600 4418900 0 0 2102 373 2275 12271;12272;12273;12274 9441;9442 9442 2 5275300 4602200 0 0 2711300 4895200 0 0 ILILHADHEQNASTSTVR EPYEVNPILERAMDRILILHADHEQNASTS LHADHEQNASTSTVRTAGSSGANPFACIAA R I L V R T 2 1 1 1 0 1 1 0 2 2 2 0 0 0 0 2 2 0 0 1 0 0 18 0 1 2 2004.0389 P0ABH7 P0ABH7 223 240 gltA Citrate synthase yes yes 3;4 1.7052E-90 176.81 By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 1 1 57731000 22404000 13335000 0 0 0 15355000 1688200 4948300 2103 200 2276 12275;12276;12277;12278;12279;12280;12281;12282 9443;9444;9445;9446;9447;9448 9443 6 22404000 13649000 0 0 0 17010000 12993000 28398000 ILIVDAK LPRMETDITIRSSEKILIVDAKYYKSIFSR ITIRSSEKILIVDAKYYKSIFSRRMGTEKF K I L A K Y 1 0 0 1 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 7 0 0 1 770.49019 P15006 P15006 253 259 mcrC Protein McrC yes yes 2 0.0048596 70.912 By MS/MS By matching By MS/MS 1 1 1 935920000 383240000 0 0 0 261650000 291030000 0 0 2104 280 2277 12283;12284;12285 9449;9450 9450 1 383240000 0 0 0 315630000 322400000 0 0 ILKGIFGSSA MENISDDVIVGRCLAILKGIFGSSAVPQPK GRCLAILKGIFGSSAVPQPKETVVSRWRAD A I L S A V 1 0 0 0 0 0 0 2 0 2 1 1 0 1 0 2 0 0 0 0 0 0 10 1 0 0 991.57023 LSD1-FL-His LSD1-FL-His 732 741 yes yes 2 1.3256E-08 120.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 143010000 10897000 6453300 0 0 64088000 61569000 0 0 2105 24 2278 12286;12287;12288;12289 9451;9452;9453;9454 9454 4 65777000 38623000 0 0 91241000 87766000 0 0 ILKGIFGSSAVP MENISDDVIVGRCLAILKGIFGSSAVPQPK CLAILKGIFGSSAVPQPKETVVSRWRADPW A I L V P Q 1 0 0 0 0 0 0 2 0 2 1 1 0 1 1 2 0 0 0 1 0 0 12 1 0 1 1187.6914 LSD1-FL-His LSD1-FL-His 732 743 yes yes 2 2.4193E-16 116.05 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 48390000 3299900 3633700 0 0 16978000 24478000 0 0 2106 24 2279 12290;12291;12292;12293 9455 9455 1 19920000 21748000 0 0 24171000 34894000 0 0 ILKNLDVPVARKP VWALFNKENPSPFVEILKNLDVPVARKP__ VEILKNLDVPVARKP_______________ E I L K P - 1 1 1 1 0 0 0 0 0 1 2 2 0 0 2 0 0 0 0 2 0 0 13 3 0 2 1461.9031 P15038 P15038 672 684 helD Helicase IV yes yes 4 0.013934 20.857 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 63529000 2338700 3021700 10113000 11204000 2396200 2845400 11039000 20571000 2107 281 2280 12294;12295;12296;12297;12298;12299;12300;12301 9456;9457;9458 9458 2 35933000 46082000 85929000 84946000 36892000 43127000 84958000 118050000 ILKVKGRMNE GYQGQATDIEIHAREILKVKGRMNELMALH IHAREILKVKGRMNELMALHTGQSLEQIER E I L N E L 0 1 1 0 0 0 1 1 0 1 1 2 1 0 0 0 0 0 0 1 0 0 10 3 0 0 1186.6856 P0A6G7 P0A6G7 156 165 clpP ATP-dependent Clp protease proteolytic subunit yes yes 3 0.0041772 50.108 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 60015000 8485700 7231300 8022800 12270000 3360400 6846000 4968800 8830000 2108 69 2281 12302;12303;12304;12305;12306;12307;12308;12309 9459;9460;9461 9459 3 130380000 110280000 68168000 93024000 51736000 103760000 38241000 50674000 ILLNDEVRSA LYAIPDGDVKGRVVAILLNDEVRSADLLAI GRVVAILLNDEVRSADLLAILKALKAKGVH A I L S A D 1 1 1 1 0 0 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 1 1 0 1128.6139 P21179 P21179 605 614 katE Catalase HPII yes yes 2 0.0002286 65.305 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 114150000 1080000 816570 23156000 24543000 0 4979700 22575000 36997000 2109 293 2282 12310;12311;12312;12313;12314;12315;12316;12317 9462;9463 9462 2 6519300 4887200 196750000 186070000 0 7098600 173740000 212320000 ILMKRKITAAPVVDE GTTLQSQSRAIDAKEILMKRKITAAPVVDE ILMKRKITAAPVVDENGKLTGAINLQDFYQ E I L D E N 2 1 0 1 0 0 1 0 0 2 1 2 1 0 1 0 1 0 0 2 0 0 15 3 0 3 1682.9753 P17115 P17115 288 302 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 3 0.00033894 57.804 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 2 2 2 110000000 13581000 7768600 18402000 35511000 6332400 4779300 16398000 7229800 2110 287 2283;2284 12318;12319;12320;12321;12322;12323;12324;12325;12326;12327;12328;12329;12330;12331 9464;9465;9466;9467;9468;9469;9470;9471;9472 9469 239 9 208670000 118470000 156360000 269230000 97493000 72438000 126200000 41490000 ILNLMGR LVSFLHLPVQSGSDRILNLMGRTHTALEYK PVQSGSDRILNLMGRTHTALEYKAIIRKLR R I L G R T 0 1 1 0 0 0 0 1 0 1 2 0 1 0 0 0 0 0 0 0 0 0 7 0 0 0 815.46874 P0AEI1 P0AEI1 273 279 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.021132 46.351 By matching By MS/MS By matching By matching 1 1 1 1 9903000 3205800 3747300 1552600 0 1397300 0 0 0 2111 237 2285 12332;12333;12334;12335 9473 9473 1 3205800 3835700 13192000 0 1685600 0 0 0 ILNVSPR ECLKILDAVDFPPERILNVSPRRLLNFLES AVDFPPERILNVSPRRLLNFLESRGMAPIA R I L P R R 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 7 0 0 1 797.47594 P75914 P75914 219 225 ycdX Probable phosphatase YcdX yes yes 2 3.428E-07 122.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71060000 24322000 20368000 0 0 12063000 14306000 0 0 2112 412 2286 12336;12337;12338;12339 9474;9475;9476;9477 9477 4 24322000 20848000 0 0 14552000 15848000 0 0 ILPGFENR ASLMKQMPGMVLINRILPGFENRCIALDDR GMVLINRILPGFENRCIALDDRYGAWLATR R I L N R C 0 1 1 0 0 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 8 0 1 1 944.50797 P03024 P03024 147 154 galR HTH-type transcriptional regulator GalR yes yes 2 0.023015 44.447 By MS/MS 1 4181300 0 0 0 0 4181300 0 0 0 2113 42 2287 12340 9478 9478 1 0 0 0 0 5043900 0 0 0 ILQGNARFVDE QTRMRQGFYERNHCEILQGNARFVDEHTLA NHCEILQGNARFVDEHTLALDCPDGSVETL E I L D E H 1 1 1 1 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 11 1 0 1 1260.6463 P27306 P27306 112 122 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 0.0049659 52.716 By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 27130000 5912800 0 4585300 6142600 0 0 5045700 5443400 2114 323 2288 12341;12342;12343;12344;12345 9479;9480 9479 2 90848000 0 38961000 46571000 0 0 38833000 31239000 ILSVLLENESGALSR ______________________________ ILSVLLENESGALSRVIGLFSQRGYNIESL R I L S R V 1 1 1 0 0 0 2 1 0 1 4 0 0 0 0 3 0 0 0 1 0 0 15 0 2 1 1599.8832 P00894 P00894 4 18 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 2.8381E-40 180.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32026000 10515000 7518200 0 0 5059400 8932900 0 0 2115 30 2289 12346;12347;12348;12349 9481;9482;9483;9484 9483 4 10515000 7695700 0 0 6103200 9895700 0 0 ILTEPNASITVQYK IRVELQALTTSDFERILTEPNASITVQYKA RILTEPNASITVQYKALMATEGVNIEFTDS R I L Y K A 1 0 1 0 0 1 1 0 0 2 1 1 0 0 1 1 2 0 1 1 0 0 14 0 1 2 1575.8508 P0A6H5 P0A6H5 343 356 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0065599 46.73 By matching By matching By MS/MS 1 1 1 22320000 5963500 3594200 0 0 12762000 0 0 0 2116 71 2290 12350;12351;12352 9485 9485 1 5963500 3679000 0 0 15395000 0 0 0 ILVEGTSR QAMAWSRRMLGTTQRILVEGTSRKSIMELS MLGTTQRILVEGTSRKSIMELSGRTENNRV R I L S R K 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 8 0 1 0 873.49198 P0AEI1 P0AEI1 387 394 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.0073421 57.281 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 13912000 3431900 4349400 0 0 2861900 3269200 0 0 2117 237 2291 12353;12354;12355;12356;12357 9486;9487;9488;9489 9486 4 3431900 4452100 0 0 3452300 3877000 0 0 ILVIAADER LDGVDYPKPYRGKHKILVIAADERYLPTDN YRGKHKILVIAADERYLPTDNGKLFSTGNH K I L E R Y 2 1 0 1 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1 2 998.57605 P31658 P31658 51 59 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 0.00012718 103.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 329580000 59022000 53949000 29883000 31924000 45707000 58915000 21312000 28869000 2118 335 2292 12358;12359;12360;12361;12362;12363;12364;12365;12366;12367;12368;12369 9490;9491;9492;9493;9494 9493 5 168080000 153390000 253910000 242030000 55501000 65897000 164020000 165680000 ILVKVGDKVEAE IKVPDIGADEVEITEILVKVGDKVEAEQSL ITEILVKVGDKVEAEQSLITVEGDKASMEV E I L A E Q 1 0 0 1 0 0 2 1 0 1 1 2 0 0 0 0 0 0 0 3 0 0 12 2 1 1 1298.7446 P06959 P06959 20 31 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes no 3 0.002781 45.077 By matching By MS/MS 1 1 10054000 0 0 0 2707400 0 7346900 0 0 2119 53 2293 12370;12371 9495 9495 1 0 0 0 20526000 0 111350000 0 0 ILVPPVR LLHRLLDKEEMPLQRILVPPVRVIERRSTD KEEMPLQRILVPPVRVIERRSTDYRSLTDP R I L V R V 0 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 0 2 0 0 7 0 0 2 792.52216 P0ACI3 P0ACI3 264 270 xylR Xylose operon regulatory protein yes yes 2 0.0053165 61.997 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22390000 7642100 3510300 0 0 5327800 5909600 0 0 2120 212 2294 12372;12373;12374;12375 9496;9497;9498;9499 9498 4 7642100 3593200 0 0 6427000 6546500 0 0 IMALAGIANGGRGVDTTDAAANAIPAAQTLARE LLSFKPAAIRGNASEIMALAGIANGGRGVD AAANAIPAAQTLARETGAIVVVTGEMDYVT E I M R E T 10 2 2 2 0 1 1 4 0 3 2 0 1 0 1 0 3 0 0 1 0 0 33 2 0 11 3179.6357 P76423 P76423 131 163 thiM Hydroxyethylthiazole kinase yes yes 3 1.7197E-21 92.121 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 47200000 1050600 1112000 0 0 22726000 20164000 0 2147600 2121 426 2295;2296 12376;12377;12378;12379;12380;12381 9500;9501;9502;9503 9502 328 4 16143000 16958000 0 0 349890000 305610000 0 12325000 IMGGADVILVPSR QVGVQIGYHEAFSHRIMGGADVILVPSRFE HRIMGGADVILVPSRFEPCGLTQLYGLKYG R I M S R F 1 1 0 1 0 0 0 2 0 2 1 0 1 0 1 1 0 0 0 2 0 0 13 0 0 2 1326.733 P0A6U8 P0A6U8 363 375 glgA Glycogen synthase yes yes 2 1.9926E-10 113.63 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 41333000 9759100 12082000 0 0 10816000 8676600 0 0 2122 83 2297;2298 12382;12383;12384;12385;12386 9504;9505;9506;9507;9508 9504 88 5 9759100 12367000 0 0 13047000 9611700 0 0 IMNVLGEPVDMK EHPIEVPVGKATLGRIMNVLGEPVDMKGEI LGRIMNVLGEPVDMKGEIGEEERWAIHRAA R I M M K G 0 0 1 1 0 0 1 1 0 1 1 1 2 0 1 0 0 0 0 2 0 0 12 0 1 1 1344.6781 P0ABB4 P0ABB4 88 99 atpD ATP synthase subunit beta yes yes 2 9.1542E-06 79.974 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23953000 4560900 4494000 0 0 7653000 7245500 0 0 2123 194 2299 12387;12388;12389;12390 9509;9510;9511;9512 9512 4 4560900 4600100 0 0 9231800 8026400 0 0 IMNVLGEPVDMKGEIGEEER EHPIEVPVGKATLGRIMNVLGEPVDMKGEI GEPVDMKGEIGEEERWAIHRAAPSYEELSN R I M E R W 0 1 1 1 0 0 5 3 0 2 1 1 2 0 1 0 0 0 0 2 0 0 20 1 5 1 2244.0766 P0ABB4 P0ABB4 88 107 atpD ATP synthase subunit beta yes yes 3 0.016519 24.3 By MS/MS By matching By matching 1 1 1 17048000 8757300 5253400 0 0 3037500 0 0 0 2124 194 2300 12391;12392;12393 9513 9513 1 8757300 5377300 0 0 3664200 0 0 0 IMSDLMQTATIVVK I M V K 1 0 0 1 0 1 0 0 0 2 1 1 2 0 0 1 2 0 0 2 0 0 14 0 0 1 1548.8255 REV__P0AD61 yes yes 2 0.0066506 32.606 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 2125 446 2301 12394 9514 9514 340 0 0 0 0 0 0 0 0 0 IMVNGRVVNIA GATRAEARQLVSHKAIMVNGRVVNIASYQV SHKAIMVNGRVVNIASYQVSPNDVVSIREK A I M I A S 1 1 2 0 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 3 0 0 11 1 0 0 1184.67 P0A7V8 P0A7V8 123 133 rpsD 30S ribosomal protein S4 yes yes 2 0.011188 41.029 By matching By MS/MS By MS/MS 1 1 1 5657300 342780 0 0 0 3900300 1414300 0 0 2126 130 2302 12395;12396;12397 9515 9515 0 2069200 0 0 0 5552700 2016100 0 0 INAFKPTADRPFVLGLPTGGTPMTTYK AEQVGKWAARHIVNRINAFKPTADRPFVLG VLGLPTGGTPMTTYKALVEMHKAGQVSFKH R I N Y K A 2 1 1 1 0 0 0 3 0 1 2 2 1 2 4 0 5 0 1 1 0 0 27 2 0 6 2892.5208 P0A759 P0A759 24 50 nagB Glucosamine-6-phosphate deaminase yes yes 4 7.1644E-20 81.839 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 63514000 12469000 15718000 0 0 11271000 24056000 0 0 2127 96 2303 12398;12399;12400;12401 9516;9517;9518;9519 9518 4 12469000 16089000 0 0 13596000 26648000 0 0 INALETVTIASK KLAEVLAAANARAEKINALETVTIASKAGD AEKINALETVTIASKAGDEGKLFGSIGTRD K I N S K A 2 0 1 0 0 0 1 0 0 2 1 1 0 0 0 1 2 0 0 1 0 0 12 0 1 2 1258.7133 P0A7R1 P0A7R1 72 83 rplI 50S ribosomal protein L9 yes yes 2 5.0129E-05 75.416 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37045000 12870000 8108200 0 0 7561500 8504900 0 0 2128 119 2304 12402;12403;12404;12405 9520;9521;9522;9523 9520 4 12870000 8299600 0 0 9121400 9421600 0 0 INALTIAGTDPSGGAGIQADLK ______________________________ GTDPSGGAGIQADLKTFSALGAYGCSVITA R I N L K T 4 0 1 2 0 1 0 4 0 3 2 1 0 0 1 1 2 0 0 0 0 0 22 0 0 5 2082.0957 P76422 P76422 4 25 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 3.9574E-99 226.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 218540000 49103000 38227000 0 0 75599000 55614000 0 0 2129 425 2305 12406;12407;12408;12409 9524;9525;9526;9527 9524 4 49103000 39130000 0 0 91195000 61608000 0 0 INGELYIVANR NVAWEMFHHARRCLKINGELYIVANRHLDY RCLKINGELYIVANRHLDYFHKLKKIFGNC K I N N R H 1 1 2 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1 1 1260.6826 P42596 P42596 332 342 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 1.3721E-07 71.349 By MS/MS By MS/MS 1 1 7216200 0 0 0 0 0 7216200 0 0 2130 366 2306 12410;12411 9528;9529 9528 2 0 0 0 0 0 7994000 0 0 INLAYTK NAAVTAAKAAVETARINLAYTKVTSPISGR KAAVETARINLAYTKVTSPISGRIGKSNVT R I N T K V 1 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 7 0 0 1 821.4647 P0AE06;P24180 P0AE06 169 175 acrA;acrE Multidrug efflux pump subunit AcrA;Multidrug export protein AcrE yes no 2 0.003536 62.659 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 2131 232 2307 12412;12413;12414 9530;9531;9532 9531 3 0 0 0 0 0 0 0 0 INPAGAPTYVPGEYK DLMSRNFIDAIIKEKINPAGAPTYVPGEYK INPAGAPTYVPGEYKLGEDFTYSVEFEVYP K I N Y K L 2 0 1 0 0 0 1 2 0 1 0 1 0 0 3 0 1 0 2 1 0 0 15 0 1 5 1575.7933 P0A850 P0A850 84 98 tig Trigger factor yes yes 2 1.5219E-06 77.597 By matching By MS/MS By matching 1 1 1 38330000 16535000 11671000 0 0 0 10124000 0 0 2132 137 2308 12415;12416;12417 9533 9533 1 16535000 11947000 0 0 0 11215000 0 0 INPGNIGNEER RIALKVAEYGVDCLRINPGNIGNEERIRMV DCLRINPGNIGNEERIRMVVDCARDKNIPI R I N E R I 0 1 3 0 0 0 2 2 0 2 0 0 0 0 1 0 0 0 0 0 0 0 11 0 2 1 1211.5895 P62620 P62620 107 117 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) yes yes 2 0.0099651 46.819 By matching By MS/MS 1 1 7920700 2798800 0 0 0 0 5121900 0 0 2133 389 2309 12418;12419 9534 9534 1 2798800 0 0 0 0 5673900 0 0 INQLVVEPTLQTTR APDFLKDIGGLETNRINQLVVEPTLQTTRD RINQLVVEPTLQTTRDPDIYAIGDCASCPR R I N T R D 0 1 1 0 0 2 1 0 0 1 2 0 0 0 1 0 3 0 0 2 0 0 14 0 1 1 1610.8992 P00393 P00393 293 306 ndh NADH dehydrogenase yes yes 2 2.4726E-17 118.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42150000 8880900 10211000 0 0 11133000 11925000 0 0 2134 25 2310 12420;12421;12422;12423 9535;9536;9537;9538 9535 4 8880900 10452000 0 0 13430000 13210000 0 0 INSNEELALPK EAQDIARSILERDVRINSNEELALPKEKLQ RDVRINSNEELALPKEKLQELHI_______ R I N P K E 1 0 2 0 0 0 2 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 11 0 2 2 1226.6507 P45578 P45578 153 163 luxS S-ribosylhomocysteine lyase yes yes 2 7.1927E-17 129.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41631000 14763000 9384100 0 0 7004300 10479000 0 0 2135 370 2311 12424;12425;12426;12427 9539;9540;9541;9542 9540 4 14763000 9605600 0 0 8449400 11609000 0 0 INTGVGFFDHMLDQIATHGGFR QIDVQVWLDREGGSKINTGVGFFDHMLDQI FDHMLDQIATHGGFRMEINVKGDLYIDDHH K I N F R M 1 1 1 2 0 1 0 4 2 2 1 0 1 3 0 0 2 0 0 1 0 0 22 0 0 1 2432.1695 P06987 P06987 194 215 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3;4 7.8209E-73 153.82 By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 268460000 21495000 25264000 0 0 154980000 66725000 0 0 2136 55 2312 12428;12429;12430;12431;12432;12433 9543;9544;9545 9543 3 21495000 25860000 0 0 186950000 73917000 0 0 INVAPGKDLTKTLNDMRQE MSQLTGQNSGDVNVEINVAPGKDLTKTLND PGKDLTKTLNDMRQEYEQLIAKNRKDIENQ E I N Q E Y 1 1 2 2 0 1 1 1 0 1 2 2 1 0 1 0 2 0 0 1 0 0 19 3 0 2 2142.1103 CON__P35527 CON__P35527 311 329 yes yes 3;4 1.3117E-11 76.768 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 3 3 1 105700000 4587500 2043800 10980000 12928000 20588000 14880000 39691000 0 + 2137 15 2313;2314 12434;12435;12436;12437;12438;12439;12440;12441;12442;12443;12444;12445 9546;9547;9548;9549;9550;9551;9552;9553;9554 9551 20 9 70485000 31169000 93297000 98011000 316970000 225530000 305470000 0 INVKGDLYIDDHHTVE HMLDQIATHGGFRMEINVKGDLYIDDHHTV NVKGDLYIDDHHTVEDTGLALGEALKIALG E I N V E D 0 0 1 3 0 0 1 1 2 2 1 1 0 0 0 0 1 0 1 2 0 0 16 1 0 0 1866.9112 P06987 P06987 218 233 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3 0.0008549 37.092 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 155390000 2417600 15306000 38673000 39820000 7238500 0 22537000 29397000 2138 55 2315 12446;12447;12448;12449;12450;12451;12452 9555 9555 1 37146000 233410000 328600000 301890000 111440000 0 173450000 168710000 IPAGVDTGDR HGHGRVERSKTLSVKIPAGVDTGDRIRLAG TLSVKIPAGVDTGDRIRLAGEGEAGEHGAP K I P D R I 1 1 0 2 0 0 0 2 0 1 0 0 0 0 1 0 1 0 0 1 0 0 10 0 0 2 999.49852 P08622 P08622 216 225 dnaJ Chaperone protein DnaJ yes yes 2 2.4411E-15 133.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 281880000 68010000 83150000 0 0 65121000 65597000 0 0 2139 61 2316 12453;12454;12455;12456 9556;9557;9558;9559 9557 4 68010000 85112000 0 0 78556000 72667000 0 0 IPATLAEFNR GLFSLGSLESTAAVRIPATLAEFNRRYPKI TAAVRIPATLAEFNRRYPKIQFSLSTGPSG R I P N R R 2 1 1 0 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 10 0 1 3 1130.6084 P77309 P77309 104 113 yneJ Uncharacterized HTH-type transcriptional regulator YneJ yes yes 2 0.012051 47.603 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 1 121970000 5619500 11018000 13779000 13930000 12451000 10044000 20667000 34460000 2140 430 2317 12457;12458;12459;12460;12461;12462;12463;12464;12465;12466;12467 9560 9560 1 86343000 94999000 117070000 105610000 130060000 97773000 159060000 197760000 IPAYEMIR LPYKRVPHPAYGNARIPAYEMIRFSVNIMR PAYGNARIPAYEMIRFSVNIMRGCFGGCSF R I P I R F 1 1 0 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 0 8 0 1 2 991.51609 Q46861 Q46861 370 377 ygiQ UPF0313 protein YgiQ yes yes 2 0.0050688 47.082 By MS/MS By MS/MS By MS/MS 1 1 1 14176000 0 0 0 0 6368900 7807000 0 0 2141 441 2318 12468;12469;12470 9561;9562 9561 2 0 0 0 0 7682900 8648400 0 0 IPEGLVR WARLAPVERVKGVLRIPEGLVRINRQGDDL ERVKGVLRIPEGLVRINRQGDDLHIETQNV R I P V R I 0 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 7 0 1 1 782.46504 P33030 P33030 274 280 yeiR Uncharacterized protein YeiR yes yes 2 0.0020446 97.596 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87685000 25389000 26575000 0 0 18788000 16933000 0 0 2142 343 2319 12471;12472;12473;12474 9563;9564;9565;9566 9564 4 25389000 27203000 0 0 22664000 18758000 0 0 IPELAGIK DWTQLDHVIDAVVAKIPELAGIKDAAPDAT IDAVVAKIPELAGIKDAAPDATFRIRGQKL K I P I K D 1 0 0 0 0 0 1 1 0 2 1 1 0 0 1 0 0 0 0 0 0 0 8 0 1 2 839.51165 P33602 P33602 680 687 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 1.7167E-07 120.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 254760000 65154000 69259000 0 0 52795000 67555000 0 0 2143 345 2320 12475;12476;12477;12478;12479;12480;12481 9567;9568;9569;9570 9567 4 65154000 73950000 0 0 63963000 75831000 0 0 IPELAGIKDAAPDATFR DWTQLDHVIDAVVAKIPELAGIKDAAPDAT ELAGIKDAAPDATFRIRGQKLAREPHRYSG K I P F R I 4 1 0 2 0 0 1 1 0 2 1 1 0 1 2 0 1 0 0 0 0 0 17 1 1 6 1783.9468 P33602 P33602 680 696 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 6.243E-20 110.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 116680000 36919000 28167000 0 0 27173000 24424000 0 0 2144 345 2321 12482;12483;12484;12485 9571;9572;9573;9574 9574 4 36919000 28832000 0 0 32779000 27056000 0 0 IPEPYAAMGSLEFAK WMVEMPKASMYVWAKIPEPYAAMGSLEFAK IPEPYAAMGSLEFAKKLLNEAKVCVSPGIG K I P A K K 3 0 0 0 0 0 2 1 0 1 1 1 1 1 2 1 0 0 1 0 0 0 15 0 2 5 1622.8014 P77434 P77434 334 348 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 4.5477E-77 174.9 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 105930000 26292000 26829000 0 0 21008000 31803000 0 0 2145 433 2322 12486;12487;12488;12489 9575;9576;9577 9575 3 26292000 27462000 0 0 25342000 35230000 0 0 IPFIETVK DDNKPLVYEPGLHFKIPFIETVKMLDARIQ EPGLHFKIPFIETVKMLDARIQTMDNQADR K I P V K M 0 0 0 0 0 0 1 0 0 2 0 1 0 1 1 0 1 0 0 1 0 0 8 0 1 1 945.55352 P0ABC3 P0ABC3 56 63 hflC Modulator of FtsH protease HflC yes yes 2 0.0046533 62.464 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19598000 3838700 5775200 0 0 5993900 3990700 0 0 2146 196 2323 12490;12491;12492;12493 9578;9579;9580;9581 9580 4 3838700 5911500 0 0 7230400 4420800 0 0 IPGSFFR PLTVNYQERTYAAGRIPGSFFRREGRPSEG ERTYAAGRIPGSFFRREGRPSEGETLIARL R I P F R R 0 1 0 0 0 0 0 1 0 1 0 0 0 2 1 1 0 0 0 0 0 0 7 0 0 1 822.43882 P05055 P05055 73 79 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0028379 89.673 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51529000 11706000 10168000 0 0 11916000 17740000 0 0 2147 48 2324 12494;12495;12496;12497 9582;9583;9584;9585 9585 4 11706000 10407000 0 0 14374000 19652000 0 0 IPLIIGR LKTDVLIDEVRAGGRIPLIIGRGLTTKARE DEVRAGGRIPLIIGRGLTTKAREALGLPHS R I P G R G 0 1 0 0 0 0 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 0 7 0 0 1 780.52216 P36683 P36683 345 351 acnB Aconitate hydratase B yes yes 2 0.0053165 61.997 By MS/MS By matching By matching 1 1 1 11614000 4671500 2164800 0 0 0 4777700 0 0 2148 350 2325 12498;12499;12500 9586 9586 1 4671500 2215900 0 0 0 5292600 0 0 IPQESGGTK LEDGVQISSGDTLARIPQESGGTKDITGGL GDTLARIPQESGGTKDITGGLPRVADLFEA R I P T K D 0 0 0 0 0 1 1 2 0 1 0 1 0 0 1 1 1 0 0 0 0 0 9 0 1 1 915.46616 P0A8T7 P0A8T7 1124 1132 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0095208 51.346 By MS/MS By MS/MS 1 1 23225000 12143000 11083000 0 0 0 0 0 0 2149 153 2326 12501;12502 9587;9588 9587 1 12143000 11344000 0 0 0 0 0 0 IPVHMIETINK QAITRSIADQARTIRIPVHMIETINKLNRI RTIRIPVHMIETINKLNRISRQMLQEMGRE R I P N K L 0 0 1 0 0 0 1 0 1 3 0 1 1 0 1 0 1 0 0 1 0 0 11 0 1 1 1293.7115 P00579 P00579 452 462 rpoD RNA polymerase sigma factor RpoD yes yes 2;3 9.2587E-133 249.69 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 1261400000 385800000 318300000 0 0 250680000 306590000 0 0 2150 27 2327;2328 12503;12504;12505;12506;12507;12508;12509;12510;12511;12512;12513;12514 9589;9590;9591;9592;9593;9594;9595;9596;9597;9598;9599;9600 9596 56 11 385800000 325810000 0 0 302400000 339640000 0 0 IPVSDTQAYR ARLMGFEAPGEAKFRIPVSDTQAYRQFGNS EAKFRIPVSDTQAYRQFGNSVVVPVFAAVA R I P Y R Q 1 1 0 1 0 1 0 0 0 1 0 0 0 0 1 1 1 0 1 1 0 0 10 0 0 2 1148.5826 P0AED9 P0AED9 423 432 dcm DNA-cytosine methyltransferase yes yes 2 0.0038644 66.621 By MS/MS By MS/MS By MS/MS 1 1 1 106600000 37837000 26455000 0 0 42308000 0 0 0 2151 235 2329 12515;12516;12517 9601 9601 1 37837000 27080000 0 0 51036000 0 0 0 IPVVSSPK VMLAYSARNRSASIRIPVVSSPKARRIEVR NRSASIRIPVVSSPKARRIEVRFPDPAANP R I P P K A 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 2 0 0 0 2 0 0 8 0 0 2 825.496 P0A9C5 P0A9C5 346 353 glnA Glutamine synthetase yes yes 2 0.018263 47.574 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 18032000 3466700 4492700 0 0 4727900 5344700 0 0 2152 164 2330 12518;12519;12520;12521 9602 9602 1 3466700 4598800 0 0 5703300 5920800 0 0 IPWDVMKLNK QQARAWLTPVQCYNKIPWDVMKLNKAGFNV QCYNKIPWDVMKLNKAGFNVPESYSLLKMP K I P N K A 0 0 1 1 0 0 0 0 0 1 1 2 1 0 1 0 0 1 0 1 0 0 10 1 0 1 1242.6795 P54746 P54746 773 782 mngB Mannosylglycerate hydrolase yes yes 2 8.08E-05 104.75 By MS/MS By MS/MS 1 1 28188000 19267000 0 0 0 8920200 0 0 0 2153 377 2331 12522;12523 9603 9603 1 19267000 0 0 0 10760000 0 0 0 IQASGYGR LGQGAHVEREIMLVKIQASGYGRDEVKRNT REIMLVKIQASGYGRDEVKRNTEIFRGQII K I Q G R D 1 1 0 0 0 1 0 2 0 1 0 0 0 0 0 1 0 0 1 0 0 0 8 0 0 1 850.42972 P00894 P00894 91 98 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 2.0696E-45 163.34 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 43906000 13197000 16843000 0 0 7767400 6099500 0 0 2154 30 2332 12524;12525;12526;12527 9604;9605;9606;9607 9605 4 13197000 17240000 0 0 9369800 6756900 0 0 IQDWYDK KVQALEEANNDLENKIQDWYDKKGPAAIQK ANNDLENKIQDWYDKKGPAAIQKNYSPYYN K I Q D K K 0 0 0 2 0 1 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 7 0 0 0 966.4447 CON__P35527 CON__P35527 185 191 yes yes 2 0.00030597 107.59 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 127520000 17773000 16546000 0 0 37958000 55244000 0 0 + 2155 15 2333 12528;12529;12530;12531 9608;9609;9610 9610 2 17773000 16937000 0 0 45789000 61198000 0 0 IQDWYDKK KVQALEEANNDLENKIQDWYDKKGPAAIQK NNDLENKIQDWYDKKGPAAIQKNYSPYYNT K I Q K K G 0 0 0 2 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 8 1 0 0 1094.5397 CON__P35527 CON__P35527 185 192 yes yes 2;3 2.0764E-17 155.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 334280000 58666000 66541000 0 0 101060000 108010000 0 0 + 2156 15 2334 12532;12533;12534;12535;12536;12537;12538;12539 9611;9612;9613;9614;9615;9616;9617;9618 9614 8 58666000 68111000 0 0 121910000 119650000 0 0 IQGQSGHSSDPAR QPVRAHKGHISNAIRIQGQSGHSSDPARGV IRIQGQSGHSSDPARGVNAIELMHDAIGHI R I Q A R G 1 1 0 1 0 2 0 2 1 1 0 0 0 0 1 3 0 0 0 0 0 0 13 0 0 2 1338.6276 P23908 P23908 189 201 argE Acetylornithine deacetylase yes yes 2;3 1.2811E-14 128.01 By MS/MS By MS/MS By MS/MS 2 2 2 666500000 270230000 295710000 0 0 0 100560000 0 0 2157 308 2335 12540;12541;12542;12543;12544;12545 9619;9620;9621;9622;9623;9624;9625 9620 6 270230000 302690000 0 0 0 111400000 0 0 IQISHISR VENRLREAVRQDRARIQISHISRFGLLEMS VRQDRARIQISHISRFGLLEMSRQRLSPSL R I Q S R F 0 1 0 0 0 1 0 0 1 3 0 0 0 0 0 2 0 0 0 0 0 0 8 0 0 0 952.54541 P21513 P21513 374 381 rne Ribonuclease E yes yes 2 0.0052091 43.769 By MS/MS 1 0 0 0 0 0 0 0 0 0 2158 297 2336 12546 9626 9626 1 0 0 0 0 0 0 0 0 IQKMVRDAE QKITIKASSGLNEDEIQKMVRDAEANAEAD GLNEDEIQKMVRDAEANAEADRKFEELVQT E I Q A E A 1 1 0 1 0 1 1 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 9 2 0 1 1088.5648 P0A6Y8 P0A6Y8 512 520 dnaK Chaperone protein DnaK yes yes 2;3 0.00020058 93.374 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 1 2 2 2 3 410610000 79303000 115600000 61215000 7117400 21207000 22107000 18092000 85969000 2159 86 2337;2338 12547;12548;12549;12550;12551;12552;12553;12554;12555;12556;12557;12558;12559;12560;12561;12562;12563;12564 9627;9628;9629;9630;9631;9632;9633;9634;9635;9636;9637 9632 93 11 1218500000 1762900000 520140000 53961000 326510000 335060000 139240000 493360000 IQKMVRDAEANAE QKITIKASSGLNEDEIQKMVRDAEANAEAD DEIQKMVRDAEANAEADRKFEELVQTRNQG E I Q A E A 3 1 1 1 0 1 2 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 13 2 1 3 1473.7246 P0A6Y8 P0A6Y8 512 524 dnaK Chaperone protein DnaK yes yes 2;3 1.6067E-11 94.616 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 2 1 308930000 26367000 27480000 46576000 28036000 37571000 34580000 70988000 37336000 2160 86 2339;2340 12565;12566;12567;12568;12569;12570;12571;12572;12573;12574;12575;12576;12577 9638;9639;9640;9641;9642;9643;9644;9645;9646 9645 93 9 405120000 419080000 395750000 212560000 578440000 524110000 546340000 214270000 IQLISSGGTLER TNSHPICHELGKRERIQLISSGGTLERKYG RERIQLISSGGTLERKYGCYVNPSLISQLK R I Q E R K 0 1 0 0 0 1 1 2 0 2 2 0 0 0 0 2 1 0 0 0 0 0 12 0 1 0 1272.7038 P0ACK8 P0ACK8 136 147 fucR L-fucose operon activator yes yes 2 1.5153E-69 174.41 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 101670000 27997000 22898000 0 0 24048000 26731000 0 0 2161 214 2341 12578;12579;12580;12581 9647;9648;9649;9650 9649 4 27997000 23438000 0 0 29009000 29612000 0 0 IQLTFEATLQQLEAPYNSDTVLVHR FIRNRTLQLWLDNPKIQLTFEATLQQLEAP QLEAPYNSDTVLVHRVHSYLERHGLINFGI K I Q H R V 2 1 1 1 0 3 2 0 1 1 4 0 0 1 1 1 3 0 1 2 0 0 25 0 2 3 2885.4923 LSD1-FL-His LSD1-FL-His 229 253 yes yes 3 0.013006 22.655 By MS/MS By MS/MS 3 1 183330000 0 0 0 0 116930000 66400000 0 0 2162 24 2342 12582;12583;12584;12585 9651 9651 1 0 0 0 0 992960000 73557000 0 0 IQNVKAQE NQSLLQPLNVKVDPEIQNVKAQEREQIKTL NVKVDPEIQNVKAQEREQIKTLNNKFASFI E I Q Q E R 1 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 8 1 0 1 928.49779 CON__P35908v2;CON__P35908 CON__P35908v2 171 178 yes no 2 8.475E-05 112.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 1 1 125610000 13339000 12632000 12944000 18715000 4303200 5284700 29240000 29153000 + 2163 16 2343 12586;12587;12588;12589;12590;12591;12592;12593;12594;12595 9652;9653 9653 2 204950000 192640000 109980000 141890000 57258000 69110000 225040000 167310000 IQPGAQRLHE QFGLTPLGHFTVNPEIQPGAQRLHEIRTQL TVNPEIQPGAQRLHEIRTQLVEQKATCVFA E I Q H E I 1 1 0 0 0 2 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 10 1 0 2 1147.6098 P39172 P39172 231 240 znuA High-affinity zinc uptake system protein ZnuA yes yes 2;3 0.0008452 86.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 2 2 1386000000 90360000 86471000 266520000 271600000 56383000 56913000 263780000 293990000 2164 361 2344 12596;12597;12598;12599;12600;12601;12602;12603;12604;12605;12606;12607;12608;12609;12610;12611;12612 9654;9655;9656;9657;9658;9659;9660;9661;9662;9663;9664;9665 9658 11 1388400000 1318700000 2264600000 2059100000 868070000 851190000 2030100000 1687200000 IQQLEYRLAETLR NQQNPQPKIHRAQTRIQQLEYRLAETLRAQ TRIQQLEYRLAETLRAQLSATRERFGNAVT R I Q L R A 1 2 0 0 0 2 2 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 13 1 2 1 1631.8995 P04994 P04994 364 376 xseA Exodeoxyribonuclease 7 large subunit yes yes 2 0.0061188 36.424 By MS/MS By matching 1 1 0 0 0 0 0 0 0 0 0 2165 47 2345 12613;12614 9666 9666 73 0 0 0 0 0 0 0 0 0 IQSVLMNALSLQE ______________________________ NEIQSVLMNALSLQEVHVSGDGSHFQVIAV E I Q Q E V 1 0 1 0 0 2 1 0 0 1 3 0 1 0 0 2 0 0 0 1 0 0 13 0 0 1 1444.7596 P0A9W6 P0A9W6 6 18 ibaG Acid stress protein IbaG yes yes 2 4.3008E-136 204.34 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 3 2 1 174920000 2193700 3626500 4419300 0 102000000 58488000 4191100 0 2166 178 2346;2347 12615;12616;12617;12618;12619;12620;12621;12622;12623;12624 9667;9668;9669;9670;9671;9672 9668 167 5 33705000 55304000 37550000 0 1444500000 886470000 32256000 0 IQTGTWQGIWLGEHR SMLGTSLVLPVHKGRIQTGTWQGIWLGEHR IQTGTWQGIWLGEHRIHGGSRRIIATLQGE R I Q H R I 0 1 0 0 0 2 1 3 1 2 1 0 0 0 0 0 2 2 0 0 0 0 15 0 1 0 1780.9009 P0AF48 P0AF48 109 123 yjbQ UPF0047 protein YjbQ yes yes 2;3 1.1389E-18 121.45 By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 95865000 17620000 22242000 0 0 25654000 30348000 0 0 2167 243 2348 12625;12626;12627;12628;12629 9673;9674;9675 9675 3 17620000 22767000 0 0 30947000 33619000 0 0 IQTMDNQADR FKIPFIETVKMLDARIQTMDNQADRFVTKE MLDARIQTMDNQADRFVTKEKKDLIVDSYI R I Q D R F 1 1 1 2 0 2 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 10 0 0 1 1190.535 P0ABC3 P0ABC3 69 78 hflC Modulator of FtsH protease HflC yes yes 2 0.0039792 56.729 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10616000 4142600 2677800 0 0 1997700 1797900 0 0 2168 196 2349 12630;12631;12632;12633 9676;9677;9678;9679 9676 4 4142600 2741000 0 0 2409800 1991600 0 0 IQTYRSLLE EYQQLLDIKIRLENEIQTYRSLLEGEGSSG IRLENEIQTYRSLLEGEGSSGGGGRGGGSF E I Q L E G 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 9 1 0 0 1121.6081 CON__P13645;CON__P02535-1 CON__P13645 446 454 yes no 2 5.0197E-18 122.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 0 0 0 0 0 0 0 0 0 + 2169 12 2350 12634;12635;12636;12637;12638 9680;9681;9682;9683;9684 9681 5 0 0 0 0 0 0 0 0 IQVEHPVTEMITGVDLIK LFENGEFYFIEMNTRIQVEHPVTEMITGVD EHPVTEMITGVDLIKEQLRIAAGQPLSIKQ R I Q I K E 0 0 0 1 0 1 2 1 1 3 1 1 1 0 1 0 2 0 0 3 0 0 18 0 2 1 2021.0867 P24182 P24182 293 310 accC Biotin carboxylase yes yes 3 0.013419 25.186 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 11482000 2936300 2945200 0 0 2308200 3292000 0 0 2170 309 2351 12639;12640;12641;12642 9685;9686 9685 2 2936300 3014700 0 0 2784400 3646800 0 0 IRESVTIHR YAGEPTRVEIGDRNRIRESVTIHRGTVQGG IGDRNRIRESVTIHRGTVQGGGLTKVGSDN R I R H R G 0 2 0 0 0 0 1 0 1 2 0 0 0 0 0 1 1 0 0 1 0 0 9 1 1 0 1109.6305 P0A722 P0A722 92 100 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 3 0.0023759 53.327 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37945000 12164000 11025000 0 0 7314900 7441100 0 0 2171 92 2352 12643;12644;12645;12646 9687;9688;9689;9690 9689 4 12164000 11286000 0 0 8823900 8243100 0 0 IRGNRVTVDGE IAQQLGVSRAIAGREIRGNRVTVDGEIVRN AGREIRGNRVTVDGEIVRNAAFKLLPEHDV E I R G E I 0 2 1 1 0 0 1 2 0 1 0 0 0 0 0 0 1 0 0 2 0 0 11 2 0 0 1214.6367 P0AA43 P0AA43 22 32 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 1.8965E-06 88.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 2 2 509600000 13534000 17525000 26426000 97391000 14612000 18851000 139820000 181440000 2172 183 2353 12647;12648;12649;12650;12651;12652;12653;12654;12655;12656;12657;12658;12659;12660;12661 9691;9692;9693;9694;9695;9696;9697;9698;9699 9695 9 207950000 267260000 224530000 738380000 224970000 285720000 1076100000 1041200000 IRGNRVTVDGEIVRNAAFKLLPE IAQQLGVSRAIAGREIRGNRVTVDGEIVRN DGEIVRNAAFKLLPEHDVAYDGNPLAQQHG E I R P E H 2 3 2 1 0 0 2 2 0 2 2 1 0 1 1 0 1 0 0 3 0 0 23 4 1 3 2566.4344 P0AA43 P0AA43 22 44 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4 0.0037777 21.616 By MS/MS By MS/MS 1 1 5299000 0 0 0 0 2695500 2603400 0 0 2173 183 2354 12662;12663 9700;9701;9702 9701 3 0 0 0 0 41500000 39459000 0 0 IRHVGPDVCLHLVGA GLEKLADAPQFKFKEIRHVGPDVCLHLVGA IRHVGPDVCLHLVGA_______________ E I R G A - 1 1 0 1 1 0 0 2 2 1 2 0 0 0 1 0 0 0 0 3 0 0 15 1 0 1 1641.8773 P25539 P25539 353 367 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 3 0.011528 30.543 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9176700 1309200 2727000 0 0 3038400 2102100 0 0 2174 315 2355 12664;12665;12666;12667 9703 9703 1 20115000 41586000 0 0 46779000 31861000 0 0 IRIPTLE MELTLEEAVRGVTKEIRIPTLEECDVCHGS AVRGVTKEIRIPTLEECDVCHGSGAKPGTQ E I R L E E 0 1 0 0 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 0 0 0 7 1 0 1 840.5069 P08622 P08622 136 142 dnaJ Chaperone protein DnaJ yes yes 2 0.011533 67.035 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20936000 0 0 3076300 4275500 1023000 1058100 4221100 7281600 2175 61 2356 12668;12669;12670;12671;12672;12673 9704;9705;9706 9706 3 0 0 26139000 32415000 15750000 16037000 32487000 41788000 IRLENEIQTYR TECQNTEYQQLLDIKIRLENEIQTYRSLLE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG K I R Y R S 0 2 1 0 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 0 11 1 2 0 1433.7627 CON__P13645 CON__P13645 440 450 yes yes 2;3 8.6404E-178 251.43 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 489560000 90690000 70343000 0 0 143450000 185080000 0 0 + 2176 12 2357 12674;12675;12676;12677;12678;12679;12680;12681 9707;9708;9709;9710;9711;9712;9713;9714 9712 7 90690000 72003000 0 0 173040000 205020000 0 0 IRNNASPADPQVH YCGNHYLFNAMDIAEIRNNASPADPQVH__ AEIRNNASPADPQVH_______________ E I R V H - 2 1 2 1 0 1 0 0 1 1 0 0 0 0 2 1 0 0 0 1 0 0 13 1 0 4 1417.7062 P0A6Y5 P0A6Y5 280 292 hslO 33 kDa chaperonin yes yes 2;3 0.00066774 76.465 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 2 2 137250000 16666000 18478000 18385000 23100000 9562100 11343000 15429000 24285000 2177 85 2358 12682;12683;12684;12685;12686;12687;12688;12689;12690;12691;12692;12693;12694;12695;12696 9715;9716;9717;9718;9719;9720;9721 9719 7 256060000 281790000 156220000 175140000 147220000 169080000 118750000 139370000 IRPHHPLNR QYRVWPNEMPADLHKIRPHHPLNRNLDHNW PADLHKIRPHHPLNRNLDHNWQQALTKTSS K I R N R N 0 2 1 0 0 0 0 0 2 1 1 0 0 0 2 0 0 0 0 0 0 0 9 1 0 2 1138.6472 P76104 P76104 384 392 ydcP Uncharacterized protease YdcP yes yes 3 0.0051685 48.157 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23420000 2693600 9746600 0 0 4497800 6481900 0 0 2178 416 2359 12697;12698;12699;12700 9722;9723;9724 9722 3 2693600 9976700 0 0 5425700 7180500 0 0 IRRDDEVIVLTGK ______________________________ AKIRRDDEVIVLTGKDKGKRGKVKNVLSSG K I R G K D 0 2 0 2 0 0 1 1 0 2 1 1 0 0 0 0 1 0 0 2 0 0 13 2 1 0 1512.8624 P60624 P60624 5 17 rplX 50S ribosomal protein L24 yes yes 3 1.2955E-07 78.401 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 104730000 27865000 42525000 0 0 18422000 15918000 0 0 2179 381 2360 12701;12702;12703;12704 9725;9726;9727;9728 9726 4 27865000 43529000 0 0 22223000 17634000 0 0 IRSRSLKQLEE GSMDVNEVIEKLQQEIRSRSLKQLEE____ LQQEIRSRSLKQLEE_______________ E I R E E - 0 2 0 0 0 1 2 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 11 3 1 0 1357.7678 P0A8M3 P0A8M3 632 642 thrS Threonine--tRNA ligase yes yes 3 5.8155E-06 69.01 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 528340000 52792000 80900000 35541000 39070000 47966000 77163000 87906000 107000000 2180 147 2361 12705;12706;12707;12708;12709;12710;12711;12712 9729;9730;9731;9732;9733;9734 9733 5 811140000 1233700000 301990000 296210000 738480000 1169500000 676540000 614050000 ISAAAHNELTK LVEAGERILPALPPRISAAAHNELTKLGVR LPPRISAAAHNELTKLGVRVLTQTMVTSAD R I S T K L 3 0 1 0 0 0 1 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1 3 1153.6091 P00393 P00393 228 238 ndh NADH dehydrogenase yes yes 2;3 5.466E-08 114.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 68362000 19141000 30143000 0 0 6296400 12782000 0 0 2181 25 2362 12713;12714;12715;12716;12717;12718;12719 9735;9736;9737;9738;9739 9738 5 19141000 30854000 0 0 7595300 14159000 0 0 ISAIFTHTDNPGE MGCLGIEALLAAGYEISAIFTHTDNPGEKA YEISAIFTHTDNPGEKAFYGSVARLAAERG E I S G E K 1 0 1 1 0 0 1 1 1 2 0 0 0 1 1 1 2 0 0 0 0 0 13 0 0 2 1400.6572 P77398 P77398 26 38 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 1.7238E-18 126.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 255510000 66451000 19284000 26116000 26225000 15477000 14923000 35162000 51875000 2182 432 2363 12720;12721;12722;12723;12724;12725;12726;12727;12728 9740;9741;9742;9743;9744;9745 9742 5 358890000 294090000 221910000 198820000 238290000 226170000 270610000 297700000 ISAIFTHTDNPGEKAFYGSVARLAAE MGCLGIEALLAAGYEISAIFTHTDNPGEKA GEKAFYGSVARLAAERGIPVYAPDNVNHPL E I S A E R 5 1 1 1 0 0 2 2 1 2 1 1 0 2 1 2 2 0 1 1 0 0 26 2 1 6 2764.382 P77398 P77398 26 51 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4 7.7101E-56 122.41 By MS/MS By MS/MS 2 2 61415000 0 0 0 0 29865000 31551000 0 0 2183 432 2364 12729;12730;12731;12732 9746;9747;9748;9749 9747 4 0 0 0 0 459790000 478200000 0 0 ISALDEK ______________________________ PLLALREKISALDEKLLALLAERRELAVEV K I S E K L 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 1 1 774.41233 P0A9J8 P0A9J8 14 20 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 1;2 8.0989E-12 134.12 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 465150000 27958000 182430000 0 0 121510000 133240000 0 0 2184 166 2365 12733;12734;12735;12736;12737;12738;12739;12740 9750;9751;9752;9753;9754 9751 3 27958000 186740000 0 0 146580000 147600000 0 0 ISALGPGGLTR MDQNNPLSEITHKRRISALGPGGLTRERAG HKRRISALGPGGLTRERAGFEVRDVHPTHY R I S T R E 1 1 0 0 0 0 0 3 0 1 2 0 0 0 1 1 1 0 0 0 0 0 11 0 0 2 1040.5978 P0A8V2 P0A8V2 530 540 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0014911 66.299 By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 27271000 7533600 6941000 0 0 5422800 5700900 0 1672300 2185 154 2366 12741;12742;12743;12744;12745 9755;9756 9756 2 7533600 7104900 0 0 6541500 6315400 0 9596900 ISARQTDE NVLDNACKYCLEFVEISARQTDEHLYIVVE YCLEFVEISARQTDEHLYIVVEDDGPGIPL E I S D E H 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 8 1 0 1 918.44067 P23837 P23837 400 407 phoQ Sensor protein PhoQ yes yes 2 0.0039012 95.352 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 2186 305 2367 12746;12747;12748;12749 9757;9758;9759;9760;9761 9757 61 0 0 0 0 0 0 0 0 0 ISAVTSGVK LAEVIARYANADVERISAVTSGVKEIREAI NADVERISAVTSGVKEIREAIERARQNRNA R I S V K E 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 2 1 0 0 2 0 0 9 0 0 1 860.49673 P0AAZ4 P0AAZ4 81 89 rarA Replication-associated recombination protein A yes yes 2 0.00131 87.696 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40932000 10808000 15517000 0 0 7731500 6876100 0 0 2187 189 2368 12750;12751;12752;12753 9762;9763;9764;9765 9763 4 10808000 15883000 0 0 9326500 7617200 0 0 ISDAAQAHFAK ______________________________ ______________________________ R I S A K L 4 0 0 1 0 1 0 0 1 1 0 1 0 1 0 1 0 0 0 0 0 0 11 0 0 4 1157.5829 P63020 P63020 4 14 nfuA Fe/S biogenesis protein NfuA yes yes 2;3 0.00099354 49.418 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 24635000 6133700 8698100 0 0 5363800 4438900 0 0 2188 392 2369 12754;12755;12756;12757;12758 9766;9767;9768;9769;9770 9768 5 6133700 8903400 0 0 6470400 4917300 0 0 ISELSEGQIDTLR SKAILAAAGIAEDVKISELSEGQIDTLRDE VKISELSEGQIDTLRDEVAKFVVEGDLRRE K I S L R D 0 1 0 1 0 1 2 1 0 2 2 0 0 0 0 2 1 0 0 0 0 0 13 0 2 0 1459.7518 P0A7S9 P0A7S9 45 57 rpsM 30S ribosomal protein S13 yes yes 2 8.6049E-12 104.79 By matching By MS/MS By MS/MS 1 1 2 18664000 6614800 0 0 0 5594300 6455300 0 0 2189 123 2370 12759;12760;12761;12762 9771;9772 9772 2 6614800 0 0 0 6748500 7151000 0 0 ISELSEGQIDTLRDEVAK SKAILAAAGIAEDVKISELSEGQIDTLRDE LSEGQIDTLRDEVAKFVVEGDLRREISMSI K I S A K F 1 1 0 2 0 1 3 1 0 2 2 1 0 0 0 2 1 0 0 1 0 0 18 1 3 1 2002.0219 P0A7S9 P0A7S9 45 62 rpsM 30S ribosomal protein S13 yes yes 2;3 7.1983E-210 214.18 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 450840000 136620000 82518000 0 0 123740000 107960000 0 0 2190 123 2371 12763;12764;12765;12766;12767;12768;12769;12770 9773;9774;9775;9776;9777;9778;9779;9780;9781;9782 9781 10 136620000 84465000 0 0 149270000 119590000 0 0 ISEVPVKR KIKQDTIVHRPQRKKISEVPVKRLIQEQAD HRPQRKKISEVPVKRLIQEQADASHYFSDE K I S K R L 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 2 0 0 8 1 1 1 926.55492 P0A8B2 P0A8B2 39 46 yfcN UPF0115 protein YfcN yes yes 2 0.0025992 81.784 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13847000 3149100 5803800 0 0 4893900 0 0 0 2191 142 2372 12771;12772;12773;12774 9783;9784;9785;9786 9784 4 3149100 5940700 0 0 5903500 0 0 0 ISHGQVDLSELGPNADELLSK IYEQPNAIKNTLTGRISHGQVDLSELGPNA DLSELGPNADELLSKVEHIQILACGTSYNS R I S S K V 1 0 1 2 0 1 2 2 1 1 4 1 0 0 1 3 0 0 0 1 0 0 21 0 2 2 2221.1226 P17169 P17169 272 292 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 0 421.46 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 8260200000 3129600000 2153600000 0 0 202280000 2774700000 0 0 2192 288 2373 12775;12776;12777;12778;12779;12780;12781;12782;12783;12784 9787;9788;9789;9790;9791;9792;9793;9794 9789 8 3165600000 2225500000 0 0 331280000 3073800000 0 0 ISISTSGGSFR GYGSRSLYNLGGSKRISISTSGGSFRNRFG GSKRISISTSGGSFRNRFGAGAGGGYGFGG R I S F R N 0 1 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 0 11 0 0 0 1110.5669 CON__P13647 CON__P13647 74 84 yes yes 2 6.3728E-79 182.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 84606000 11845000 15157000 0 0 31268000 26335000 0 0 + 2193 13 2374 12785;12786;12787;12788 9795;9796;9797;9798 9798 4 11845000 15515000 0 0 37719000 29173000 0 0 ISLPTPIMSGVR LQYVKRFYDAVSTFKISLPTPIMSGVRTPT TFKISLPTPIMSGVRTPTRQFSSCVLIECG K I S V R T 0 1 0 0 0 0 0 1 0 2 1 0 1 0 2 2 1 0 0 1 0 0 12 0 0 2 1269.7115 P00452;P00452-2 P00452 205 216 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 0.0035475 48.741 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18162000 4948100 4059400 0 0 3647900 5506100 0 0 2194 26 2375 12789;12790;12791;12792 9799 9799 1 4948100 4155200 0 0 4400500 6099600 0 0 ISNDALK ______________________________ ______________________________ R I S L K A 1 0 1 1 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 7 0 0 1 759.41267 P24188 P24188 8 14 yceA UPF0176 protein YceA yes yes 2 0.015231 50.898 By MS/MS By matching By MS/MS 2 1 1 11824000 7451700 1654300 0 0 0 2717800 0 0 2195 310 2376 12793;12794;12795;12796 9800 9800 1 33244000 25229000 0 0 0 3010700 0 0 ISNEESISAMFEH RTLTLSGMLAEAIRRISNEESISAMFEH__ RRISNEESISAMFEH_______________ R I S E H - 1 0 1 0 0 0 3 0 1 2 0 0 1 1 0 3 0 0 0 0 0 0 13 0 3 1 1492.6504 P0A717 P0A717 303 315 prs Ribose-phosphate pyrophosphokinase yes yes 2 4.3744E-70 173.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 106150000 21040000 21366000 0 0 37642000 26100000 0 0 2196 91 2377 12797;12798;12799;12800 9801;9802;9803;9804 9801 4 21040000 21870000 0 0 45408000 28912000 0 0 ISNGEGVER AIRNRGLHSAFTVRKISNGEGVERVFQTHS AFTVRKISNGEGVERVFQTHSPVVDSISVK K I S E R V 0 1 1 0 0 0 2 2 0 1 0 0 0 0 0 1 0 0 0 1 0 0 9 0 2 0 959.46722 P0A7K6 P0A7K6 64 72 rplS 50S ribosomal protein L19 yes yes 2 0.0025679 50.607 By MS/MS 1 0 0 0 0 0 0 0 0 0 2197 109 2378 12801 9805 9805 1 0 0 0 0 0 0 0 0 ISPNLRYIIDE VVADGVGQGYKEVQEISPNLRYIIDELDQI EVQEISPNLRYIIDELDQICQRDRSEVDLK E I S D E L 0 1 1 1 0 0 1 0 0 3 1 0 0 0 1 1 0 0 1 0 0 0 11 1 0 1 1331.7085 P62768 P62768 72 82 yaeH UPF0325 protein YaeH yes yes 2 1.6443E-05 77.662 By MS/MS By MS/MS By MS/MS 1 1 1 5211900 0 0 1137900 1814300 0 0 2259600 0 2198 391 2379 12802;12803;12804 9806;9807;9808 9807 3 0 0 9668600 13755000 0 0 17391000 0 ISQELITNVHK AGLLLLSRFQPDRIKISQELITNVHKSGPR DRIKISQELITNVHKSGPRQAIIQAIIKCC K I S H K S 0 0 1 0 0 1 1 0 1 2 1 1 0 0 0 1 1 0 0 1 0 0 11 0 1 0 1280.7089 P75990 P75990 327 337 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2;3 4.3413E-05 84.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 74456000 20985000 21909000 0 0 11558000 20004000 0 0 2199 414 2380 12805;12806;12807;12808;12809;12810;12811;12812 9809;9810;9811;9812;9813;9814 9809 6 20985000 22426000 0 0 13943000 22160000 0 0 ISQKRSMLE MHHDFKRANGYSELEISQKRSMLENVMLTD GYSELEISQKRSMLENVMLTDSVETHKARL E I S L E N 0 1 0 0 0 1 1 0 0 1 1 1 1 0 0 2 0 0 0 0 0 0 9 2 0 0 1090.5805 P76290 P76290 195 203 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2;3 0.021528 44.349 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 2 1 2 2 32191000 2611600 2989900 8861600 7754000 1181400 812750 3028200 4951800 2200 421 2381 12813;12814;12815;12816;12817;12818;12819;12820;12821;12822;12823;12824;12825;12826;12827 9815;9816 9815 2 40126000 45597000 75295000 58787000 18189000 12318000 23306000 28417000 ISRITDDRVTEFGA DEHREPFAAISISGPISRITDDRVTEFGAM PISRITDDRVTEFGAMVIKAAKEVTLAYGG P I S G A M 1 2 0 2 0 0 1 1 0 2 0 0 0 1 0 1 2 0 0 1 0 0 14 2 1 0 1578.8002 P16528 P16528 244 257 iclR Acetate operon repressor yes yes 2;3 7.5033E-11 93.058 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 114740000 13070000 8329000 0 0 62538000 30801000 0 0 2201 285 2382 12828;12829;12830;12831;12832;12833;12834;12835 9817;9818;9819 9818 3 78900000 49849000 0 0 89035000 43906000 0 0 ISTAINEVVLHPGK FLLEAQVCQQDCQKRISTAINEVVLHPGKV RISTAINEVVLHPGKVAHMIEFEVYIDEIF R I S G K V 1 0 1 0 0 0 1 1 1 2 1 1 0 0 1 1 1 0 0 2 0 0 14 0 1 2 1476.83 P0A7B3 P0A7B3 142 155 nadK NAD kinase yes yes 2 6.5745E-41 153.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75267000 27055000 12365000 0 0 20346000 15503000 0 0 2202 99 2383 12836;12837;12838;12839 9820;9821;9822;9823 9822 4 27055000 12657000 0 0 24543000 17173000 0 0 ISTVPEAVEMQSR PNKVEMKRLQELAKRISTVPEAVEMQSRVA KRISTVPEAVEMQSRVAKIYGDRQAMAAGE R I S S R V 1 1 0 0 0 1 2 0 0 1 0 0 1 0 1 2 1 0 0 2 0 0 13 0 2 2 1445.7184 P0AFG3 P0AFG3 561 573 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 1.3337E-19 129.82 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 337020000 79679000 88409000 0 0 79333000 89601000 0 0 2203 246 2384;2385 12840;12841;12842;12843;12844;12845;12846;12847 9824;9825;9826;9827;9828;9829;9830 9824 221 6 79679000 90495000 0 0 95700000 99258000 0 0 ISTVVPSRP ILLKNTVSQMVYKHAISTVVPSRPVSHHSN MVYKHAISTVVPSRPVSHHSNNAGGGTSSN A I S R P V 0 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 1 0 0 2 0 0 9 1 0 1 954.54983 P0A6X3 P0A6X3 59 67 hfq RNA-binding protein Hfq yes yes 2 2.5659E-40 160.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 142940000 14093000 17896000 0 0 79961000 30988000 0 0 2204 84 2386 12848;12849;12850;12851 9831;9832;9833;9834;9835;9836 9835 6 85071000 107110000 0 0 113840000 44173000 0 0 ISVISGGPGTGK INWQKVAAAVALTRRISVISGGPGTGKTTT TRRISVISGGPGTGKTTTVAKLLAALIQMA R I S G K T 0 0 0 0 0 0 0 4 0 2 0 1 0 0 1 2 1 0 0 1 0 0 12 0 0 1 1071.5924 P04993 P04993 166 177 recD RecBCD enzyme subunit RecD yes yes 2 5.4369E-05 74.944 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 1 1 1 36292000 7450000 8565800 0 0 5558800 6253700 3685400 4778100 2205 46 2387 12852;12853;12854;12855;12856;12857;12858;12859 9837;9838;9839;9840 9838 4 12722000 18146000 0 0 6705600 6927800 28363000 27421000 ISYIHAE DQYPIALEGALKLKEISYIHAEAYAAGELK EGALKLKEISYIHAEAYAAGELKHGPLALI E I S A E A 1 0 0 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 1 0 0 0 7 0 0 1 831.41267 P17169 P17169 490 496 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.005387 96.048 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 4361700000 341870000 293830000 1014200000 918790000 228120000 260330000 0 1304600000 2206 288 2388 12860;12861;12862;12863;12864;12865;12866 9841;9842 9842 2 5252800000 4480900000 8617200000 6965900000 3512200000 3945800000 0 7486800000 ITAILPVTEFEEGVK GRPIVNLLPLEQDERITAILPVTEFEEGVK ITAILPVTEFEEGVKVFMATANGTVKKTVL R I T V K V 1 0 0 0 0 0 3 1 0 2 1 1 0 1 1 0 2 0 0 2 0 0 15 0 3 2 1644.8974 P0AES4 P0AES4 631 645 gyrA DNA gyrase subunit A yes yes 2 7.4125E-05 68.847 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 2207 238 2389 12867;12868;12869;12870 9843;9844;9845;9846 9846 53;54 0 0 0 0 0 0 0 0 0 ITAQDNLLVVKGAHADEQKE RIAIAVAGFAESELEITAQDNLLVVKGAHA NLLVVKGAHADEQKERTYLYQGIAERNFER E I T K E R 3 0 1 2 0 2 2 1 1 1 2 2 0 0 0 0 1 0 0 2 0 0 20 2 1 3 2178.1281 P0C054 P0C054 63 82 ibpA Small heat shock protein IbpA yes yes 3;4 0.00015006 48.376 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 1 2 2 134750000 3172000 2255400 12628000 15147000 11817000 4824000 36433000 48476000 2208 267 2390 12871;12872;12873;12874;12875;12876;12877;12878;12879;12880;12881;12882;12883 9847;9848;9849;9850;9851 9851 5 48737000 34396000 107300000 114840000 181940000 73115000 280400000 278190000 ITAVEDDHVVVDGNHMLAGQNLKFNVE MRFLAETDQGPVPVEITAVEDDHVVVDGNH GNHMLAGQNLKFNVEVVAIREATEEELAHG E I T V E V 2 0 3 3 0 1 2 2 2 1 2 1 1 1 0 0 1 0 0 5 0 0 27 1 1 2 2963.4447 P0A9K9 P0A9K9 109 135 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3;4 1.6696E-51 103.92 By matching By MS/MS By MS/MS 1 5 5 419830000 0 601490 0 0 205760000 213460000 0 0 2209 169 2391;2392 12884;12885;12886;12887;12888;12889;12890;12891;12892;12893;12894 9852;9853;9854;9855;9856;9857;9858 9857 159 6 0 9172900 0 0 3167900000 3235400000 0 0 ITAVIPYFGYAR LVVMVDALRRASAGRITAVIPYFGYARQDR AGRITAVIPYFGYARQDRRVRSARVPITAK R I T A R Q 2 1 0 0 0 0 0 1 0 2 0 0 0 1 1 0 1 0 2 1 0 0 12 0 0 3 1369.7394 P0A717 P0A717 85 96 prs Ribose-phosphate pyrophosphokinase yes yes 2 9.6124E-71 180.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 187300000 49274000 58099000 0 0 35274000 44657000 0 0 2210 91 2393 12895;12896;12897;12898 9859;9860;9861;9862 9862 4 49274000 59471000 0 0 42551000 49470000 0 0 ITDDRVTEFGAMVIK REPFAAISISGPISRITDDRVTEFGAMVIK ITDDRVTEFGAMVIKAAKEVTLAYGGMR__ R I T I K A 1 1 0 2 0 0 1 1 0 2 0 1 1 1 0 0 2 0 0 2 0 0 15 1 1 1 1693.8709 P16528 P16528 247 261 iclR Acetate operon repressor yes yes 3 1.6199E-10 77.746 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 131320000 43206000 41742000 0 0 27086000 19291000 0 0 2211 285 2394 12899;12900;12901;12902 9863;9864;9865;9866 9866 4 43206000 42727000 0 0 32674000 21370000 0 0 ITDEEYKE KINKAQALWTRNKSEITDEEYKEFYKHIAH WTRNKSEITDEEYKEFYKHIAHDFNDPLTW E I T K E F 0 0 0 1 0 0 3 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 8 1 2 0 1025.4553 P0A6Z3 P0A6Z3 241 248 htpG Chaperone protein HtpG yes yes 2 0.0092831 42.109 By MS/MS 1 0 0 0 0 0 0 0 0 0 2212 88 2395 12903 9867 9867 1 0 0 0 0 0 0 0 0 ITDRNVMGVPAVFVNGKE RIKHTAIDGGTFQNEITDRNVMGVPAVFVN RNVMGVPAVFVNGKEFGQGRMTLTEIVAKI E I T K E F 1 1 2 1 0 0 1 2 0 1 0 1 1 1 1 0 1 0 0 4 0 0 18 2 0 2 1945.0091 P35340 P35340 163 180 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 2.7821E-18 70.332 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 3 1 2 1 454750000 0 0 114980000 158420000 0 0 116010000 65335000 2213 348 2396;2397 12904;12905;12906;12907;12908;12909;12910;12911;12912;12913;12914;12915 9868;9869;9870;9871;9872;9873;9874;9875 9871 281 8 0 0 976970000 1201100000 0 0 892830000 374950000 ITDRNVMGVPAVFVNGKEFGQGRMTLTE RIKHTAIDGGTFQNEITDRNVMGVPAVFVN VNGKEFGQGRMTLTEIVAKIDTGAEKRAAE E I T T E I 1 2 2 1 0 1 2 4 0 1 1 1 2 2 1 0 3 0 0 4 0 0 28 3 1 2 3065.5427 P35340 P35340 163 190 ahpF Alkyl hydroperoxide reductase subunit F yes yes 4 0.00031474 51.963 By MS/MS By MS/MS 1 1 12056000 0 0 0 0 6038100 6017900 0 0 2214 348 2398 12916;12917 9876;9877 9877 2 0 0 0 0 92963000 91210000 0 0 ITDVEVLK QAFADKVLDAAVAGKITDVEVLKAQFEEER DAAVAGKITDVEVLKAQFEEERVALVAKIG K I T L K A 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 8 0 1 0 915.5277 P0A6P1 P0A6P1 105 112 tsf Elongation factor Ts yes yes 2 0.021141 45.68 By matching By matching By MS/MS 1 1 1 20725000 6985900 6414100 0 0 0 7324900 0 0 2215 77 2399 12918;12919;12920 9878 9878 1 6985900 6565500 0 0 0 8114400 0 0 ITDVYPNSLRGKVVRTEDE FEGTPDMIGKFVDVEITDVYPNSLRGKVVR YPNSLRGKVVRTEDEMGLRVAETPESVIAR E I T D E M 0 2 1 2 0 0 2 1 0 1 1 1 0 0 1 1 2 0 1 3 0 0 19 3 1 1 2190.1281 P0AEI1 P0AEI1 427 445 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 3;4 0.00086321 42.813 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 2 52910000 4302300 0 10236000 11889000 2452200 0 11709000 12322000 2216 237 2400 12921;12922;12923;12924;12925;12926;12927;12928;12929;12930 9879;9880;9881;9882;9883;9884 9879 6 66104000 0 86974000 90140000 37754000 0 90112000 70712000 ITEKDTE KPFKNQAFKNGEFIEITEKDTEGRWSVFFF FKNGEFIEITEKDTEGRWSVFFFYPADFTF E I T T E G 0 0 0 1 0 0 2 0 0 1 0 1 0 0 0 0 2 0 0 0 0 0 7 1 1 0 834.39708 P0AE08 P0AE08 24 30 ahpC Alkyl hydroperoxide reductase subunit C yes yes 2 0.011887 67.035 By MS/MS By MS/MS By MS/MS 1 1 1 14814000 1185900 0 0 0 0 0 6228600 7399200 2217 233 2401 12931;12932;12933 9885 9885 1 1185900 0 0 0 0 0 47937000 42463000 ITEYEKDANGELVAK YRSGLASLHARVKVRITEYEKDANGELVAK ITEYEKDANGELVAKTSLKDTTVGRAILWM R I T A K T 2 0 1 1 0 0 3 1 0 1 1 2 0 0 0 0 1 0 1 1 0 0 15 1 3 2 1678.8414 P0A8T7 P0A8T7 552 566 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 8.6852E-05 55.885 By MS/MS By MS/MS By MS/MS 1 1 1 15943000 8963900 0 0 0 6979300 0 0 0 2218 153 2402 12934;12935;12936 9886;9887 9887 2 8963900 0 0 0 8419200 0 0 0 ITFIDGDEGILLHR TFDPGFTSTASCESKITFIDGDEGILLHRG KITFIDGDEGILLHRGFPIDQLATDSNYLE K I T H R G 0 1 0 2 0 0 1 2 1 3 2 0 0 1 0 0 1 0 0 0 0 0 14 0 1 0 1597.8464 P0ABH7 P0ABH7 57 70 gltA Citrate synthase yes yes 3 7.479E-12 101.32 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87292000 22493000 16010000 0 0 23842000 24947000 0 0 2219 200 2403 12937;12938;12939;12940 9888;9889;9890;9891 9888 4 22493000 16388000 0 0 28761000 27636000 0 0 ITGPKNENIK LNFSEGVETGFSGAKITGPKNENIKTLPAK FSGAKITGPKNENIKTLPAKRNEQDQKQLI K I T I K T 0 0 2 0 0 0 1 1 0 2 0 2 0 0 1 0 1 0 0 0 0 0 10 1 1 1 1112.619 P0AA57 P0AA57 65 74 yobA Protein YobA yes yes 2;3 3.2837E-14 128.27 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 167670000 78677000 79769000 0 0 6598400 2622600 0 0 2220 184 2404 12941;12942;12943;12944;12945;12946;12947 9892;9893;9894;9895;9896 9893 4 78677000 81652000 0 0 7959600 2905300 0 0 ITHFDHER SRGPTLLEDFILREKITHFDHERIPERIVH DFILREKITHFDHERIPERIVHARGSAAHG K I T E R I 0 1 0 1 0 0 1 0 2 1 0 0 0 1 0 0 1 0 0 0 0 0 8 0 1 0 1053.4992 P21179 P21179 114 121 katE Catalase HPII yes yes 2;3 1.1787E-05 103.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 170680000 52867000 57336000 0 0 28430000 32047000 0 0 2221 293 2405 12948;12949;12950;12951;12952;12953;12954;12955;12956 9897;9898;9899;9900;9901;9902;9903;9904;9905;9906 9901 10 52867000 58689000 0 0 35800000 35501000 0 0 ITHFDHERIPER SRGPTLLEDFILREKITHFDHERIPERIVH REKITHFDHERIPERIVHARGSAAHGYFQP K I T E R I 0 2 0 1 0 0 2 0 2 2 0 0 0 1 1 0 1 0 0 0 0 0 12 1 2 1 1548.7797 P21179 P21179 114 125 katE Catalase HPII yes yes 3;4 3.7892E-11 101.6 By MS/MS By MS/MS By matching By matching 2 2 1 1 53792000 21639000 27868000 0 0 1251100 0 0 3033400 2222 293 2406 12957;12958;12959;12960;12961;12962 9907;9908;9909;9910 9909 2 21639000 28526000 0 0 1509300 0 0 17408000 ITIILVAPAR ______________________________ ______________________________ R I T A R A 2 1 0 0 0 0 0 0 0 3 1 0 0 0 1 0 1 0 0 1 0 0 10 0 0 3 1065.691 P37005 P37005 3 12 lasT Uncharacterized tRNA/rRNA methyltransferase LasT yes yes 2 0.0004608 84.568 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11608000 2654700 2187100 0 0 3217000 3548900 0 0 2223 353 2407 12963;12964;12965;12966 9911;9912;9913;9914 9914 4 2654700 2238800 0 0 3880700 3931300 0 0 ITLALAGFR FPPYNIEKSDDNHYRITLALAGFRQEDLEI DDNHYRITLALAGFRQEDLEIQLEGTRLSV R I T F R Q 2 1 0 0 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 0 2 960.57565 P0C058 P0C058 47 55 ibpB Small heat shock protein IbpB yes yes 2 0.0021007 75.854 By matching By MS/MS By MS/MS 1 1 1 5265600 0 770390 0 0 2115500 2379700 0 0 2224 268 2408 12967;12968;12969 9915;9916 9915 2 0 788570 0 0 2551900 2636200 0 0 ITLHHKLCHAA IVAQLRIAIAPDDIAITLHHKLCHAARQLL DDIAITLHHKLCHAARQLLEQTLPAIKHGN A I T A A R 2 0 0 0 1 0 0 0 3 1 2 1 0 0 0 0 1 0 0 0 0 0 11 1 0 1 1299.687 P77398 P77398 159 169 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.0035222 51.436 By MS/MS By MS/MS By MS/MS 1 1 1 8445500 850990 1001500 0 0 0 6593100 0 0 2225 432 2409 12970;12971;12972 9917 9917 1 5137000 5993800 0 0 0 9398400 0 0 ITLHLREGEDE EYTVADITKEDRGTEITLHLREGEDEFLDD RGTEITLHLREGEDEFLDDWRVRSIISKYS E I T D E F 0 1 0 1 0 0 3 1 1 1 2 0 0 0 0 0 1 0 0 0 0 0 11 1 2 0 1310.6466 P0A6Z3 P0A6Z3 176 186 htpG Chaperone protein HtpG yes yes 3 1.4173E-06 77.744 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 96190000 2550300 1363000 20226000 24253000 0 3845500 18949000 25004000 2226 88 2410 12973;12974;12975;12976;12977;12978;12979 9918 9918 1 39184000 20785000 171860000 183870000 0 58284000 145840000 143490000 ITLIENK VDEIFSGLDYANFPKITLIENKMKVDEMVT LDYANFPKITLIENKMKVDEMVTVRDITLT K I T N K M 0 0 1 0 0 0 1 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 7 0 1 0 829.49092 P0A6T5 P0A6T5 87 93 folE GTP cyclohydrolase 1 yes yes 2 4.7791E-54 154.35 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 2227 81 2411 12980;12981;12982;12983 9919;9920;9921;9922 9920 4 0 0 0 0 0 0 0 0 ITLLFNANK ______________________________ FTKRHRITLLFNANKAYDRQVVEGVGEYLQ R I T N K A 1 0 2 0 0 0 0 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 9 0 0 1 1032.5968 P0ACI3 P0ACI3 8 16 xylR Xylose operon regulatory protein yes yes 2 0.0011236 89.296 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18984000 4220000 3753500 0 0 4733600 6277100 0 0 2228 212 2412 12984;12985;12986;12987 9923;9924;9925;9926 9925 4 4220000 3842100 0 0 5710100 6953700 0 0 ITLNMGVGEAIADKK EFNYNSVMQVPRVEKITLNMGVGEAIADKK ITLNMGVGEAIADKKLLDNAAADLAAISGQ K I T K K L 2 0 1 1 0 0 1 2 0 2 1 2 1 0 0 0 1 0 0 1 0 0 15 1 1 2 1558.8389 P62399 P62399 34 48 rplE 50S ribosomal protein L5 yes yes 3 8.3929E-19 121.79 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 96314000 29808000 2675200 0 0 31537000 32294000 0 0 2229 388 2413 12988;12989;12990;12991 9927;9928;9929 9927 3 29808000 2738400 0 0 38043000 35775000 0 0 ITMLQQEIDEYYAHFR GIVRTTKRLERALRRITMLQQEIDEYYAHF TMLQQEIDEYYAHFRVSNNLLELRNLVQVA R I T F R V 1 1 0 1 0 2 2 0 1 2 1 0 1 1 0 0 1 0 2 0 0 0 16 0 2 1 2055.9724 P10902 P10902 467 482 nadB L-aspartate oxidase yes yes 3 7.7346E-37 140.19 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 220600000 41957000 47897000 0 0 59716000 71029000 0 0 2230 274 2414;2415 12992;12993;12994;12995;12996;12997;12998;12999 9930;9931;9932;9933;9934 9933 232 5 41957000 49028000 0 0 72035000 78684000 0 0 ITNVFSPTLVRRHSVSTPSLE AELALALADNRPLPEITNVFSPTLVRRHSV PTLVRRHSVSTPSLEASHHATSD_______ E I T L E A 0 2 1 0 0 0 1 0 1 1 2 0 0 1 2 4 3 0 0 3 0 0 21 2 0 2 2339.2597 P03024 P03024 315 335 galR HTH-type transcriptional regulator GalR yes yes 3 0.0002001 47.047 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24430000 1321700 2424000 3331600 5018800 0 0 4477900 7855600 2231 42 2416 13000;13001;13002;13003;13004;13005 9935;9936;9937 9937 3 20308000 36966000 28309000 38050000 0 0 34463000 45082000 ITPVFVR LSDITKADFLSDPNKITPVFVRFSTVQGGA DFLSDPNKITPVFVRFSTVQGGAGSADTVR K I T V R F 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 7 0 0 1 830.50142 P21179 P21179 159 165 katE Catalase HPII yes yes 2 0.00045461 106.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 230010000 58020000 47861000 0 0 66790000 57342000 0 0 2232 293 2417 13006;13007;13008;13009 9938;9939;9940;9941;9942 9941 5 58020000 48991000 0 0 80569000 63522000 0 0 ITPVRSVDGIQVGE LYLADEVFMSGTAAEITPVRSVDGIQVGEG EITPVRSVDGIQVGEGRCGPVTKRIQQAFF E I T G E G 0 1 0 1 0 1 1 2 0 2 0 0 0 0 1 1 1 0 0 3 0 0 14 1 0 1 1468.7886 P0AB80 P0AB80 262 275 ilvE Branched-chain-amino-acid aminotransferase yes yes 2 0.002519 48.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 35904000 1630500 1489600 6820100 9386900 0 0 8345600 8231600 2233 191 2418 13010;13011;13012;13013;13014;13015 9943;9944;9945 9944 3 25052000 22717000 57949000 71167000 0 0 64230000 47240000 ITRENFDEWMIP ______________________________ SQPITRENFDEWMIPVYAPAPFIPVRGEGS P I T I P V 0 1 1 1 0 0 2 0 0 2 0 0 1 1 1 0 1 1 0 0 0 0 12 1 2 0 1549.7235 P77581 P77581 5 16 astC Succinylornithine transaminase yes yes 2 0.0024301 61.398 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 28560000 2485700 13262000 0 0 11070000 1741800 0 0 2234 437 2419 13016;13017;13018;13019;13020 9946;9947 9947 2 2485700 13575000 0 0 13649000 2483000 0 0 ITRQEIGQIVGCSR KQPDAMTHPDGMQIKITRQEIGQIVGCSRE KITRQEIGQIVGCSRETVGRILKMLEDQNL K I T S R E 0 2 0 0 1 2 1 2 0 3 0 0 0 0 0 1 1 0 0 1 0 0 14 1 1 0 1615.8464 P0ACJ8 P0ACJ8 168 181 crp cAMP-activated global transcriptional regulator CRP yes yes 3 5.8251E-08 80.632 By MS/MS By MS/MS 1 1 19666000 11051000 8615000 0 0 0 0 0 0 2235 213 2420 13021;13022 9948;9949 9949 2 11051000 8818400 0 0 0 0 0 0 ITRRSVNIFDKTGAE VTRRFIFLEEGDIAEITRRSVNIFDKTGAE ITRRSVNIFDKTGAEVKRQDIESNLQYDAG E I T A E V 1 2 1 1 0 0 1 1 0 2 0 1 0 1 0 1 2 0 0 1 0 0 15 3 0 1 1705.9111 P17169 P17169 215 229 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3;4 2.487E-38 143.93 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 3 3 3 4 3 3 5938100000 380260000 441900000 770350000 713860000 233010000 279270000 1301600000 1817800000 2236 288 2421 13023;13024;13025;13026;13027;13028;13029;13030;13031;13032;13033;13034;13035;13036;13037;13038;13039;13040;13041;13042;13043;13044;13045;13046;13047;13048 9950;9951;9952;9953;9954;9955;9956;9957;9958;9959;9960;9961;9962;9963;9964;9965;9966;9967;9968;9969 9953 20 5836700000 6739000000 6545600000 5412200000 3587400000 4213200000 10018000000 10432000000 ITRRSVNIFDKTGAEVKRQDIE VTRRFIFLEEGDIAEITRRSVNIFDKTGAE IFDKTGAEVKRQDIESNLQYDAGDKGIYRH E I T I E S 1 3 1 2 0 1 2 1 0 3 0 2 0 1 0 1 2 0 0 2 0 0 22 5 1 1 2574.3878 P17169 P17169 215 236 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4;5 2.2433E-06 55.588 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 1 2 2 240860000 34557000 8642600 26398000 34108000 33299000 7529700 22177000 74149000 2237 288 2422 13049;13050;13051;13052;13053;13054;13055;13056;13057;13058;13059;13060;13061;13062 9970;9971;9972;9973;9974;9975;9976;9977 9975 8 530970000 131800000 224300000 258590000 512670000 114120000 170680000 425530000 ITRSMKVLGCYPSENVVPVDPT LESAEMQKALKELGEITRSMKVLGCYPSEN LGCYPSENVVPVDPT_______________ E I T P T - 0 1 1 1 1 0 1 1 0 1 1 1 1 0 3 2 2 0 1 4 0 0 22 2 1 3 2461.2345 P0A9J8 P0A9J8 365 386 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 3 8.8675E-24 88.755 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 1 1 2 337410000 44767000 47159000 13527000 40634000 81188000 57566000 11159000 41407000 2238 166 2423;2424 13063;13064;13065;13066;13067;13068;13069;13070;13071;13072;13073;13074;13075 9978;9979;9980;9981;9982;9983;9984;9985;9986;9987;9988;9989;9990 9985 156 13 687830000 719190000 114930000 308070000 1250000000 872490000 85879000 237630000 ITSVDTPLGGDSEK KPVDDVSRMLRLNERITSVDTPLGGDSEKA RITSVDTPLGGDSEKALLDILADEKENGPE R I T E K A 0 0 0 2 0 0 1 2 0 1 1 1 0 0 1 2 2 0 0 1 0 0 14 0 1 1 1417.6937 P13445 P13445 219 232 rpoS RNA polymerase sigma factor RpoS yes yes 2 2.492E-76 172.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 100890000 29738000 31584000 0 0 20723000 18848000 0 0 2239 279 2425 13076;13077;13078;13079 9991;9992;9993;9994 9991 4 29738000 32329000 0 0 24998000 20879000 0 0 ITTIGER GKIFADLGISLHGARITTIGERVEDLFIIA GISLHGARITTIGERVEDLFIIATADRRAL R I T E R V 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 7 0 1 0 788.43922 P27249 P27249 847 853 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0025235 82.913 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 94278000 21236000 27897000 1182300 1281200 19536000 20827000 2319200 0 2240 320 2426 13080;13081;13082;13083;13084;13085;13086;13087;13088 9995;9996;9997;9998 9998 4 33904000 41942000 10046000 9713500 23567000 23071000 17849000 0 ITVKVLKFDRE KRVKHPSEIVNVGDEITVKVLKFDRERTRV VGDEITVKVLKFDRERTRVSLGLKQLGEDP E I T R E R 0 1 0 1 0 0 1 0 0 1 1 2 0 1 0 0 1 0 0 2 0 0 11 3 0 0 1346.7922 P0AG67 P0AG67 241 251 rpsA 30S ribosomal protein S1 yes yes 3 0.00077598 64.65 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 2 1 1 32001000 0 1308000 0 0 1277000 1599400 12828000 14988000 2241 261 2427 13089;13090;13091;13092;13093;13094;13095;13096 9999;10000;10001 10000 3 0 19947000 0 0 14018000 16646000 98728000 86013000 IVAGAPAR LLLPNNPNMVIVDTKIVAGAPARLLAAGIG MVIVDTKIVAGAPARLLAAGIGDALATWFE K I V A R L 3 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 8 0 0 4 753.44972 P0A9S5 P0A9S5 156 163 gldA Glycerol dehydrogenase yes yes 2 0.0042011 64.776 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15013000 4019200 4340200 0 0 3258500 3395500 0 0 2242 176 2428 13097;13098;13099;13100 10002;10003;10004;10005 10004 4 4019200 4442600 0 0 3930800 3761400 0 0 IVAKIDTGAE VNGKEFGQGRMTLTEIVAKIDTGAEKRAAE MTLTEIVAKIDTGAEKRAAEELNKRDAYDV E I V A E K 2 0 0 1 0 0 1 1 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 1 0 2 1015.555 P35340 P35340 191 200 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.1293E-05 111.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 455900000 32539000 27749000 65222000 77184000 17499000 14132000 90521000 131060000 2243 348 2429 13101;13102;13103;13104;13105;13106;13107;13108 10006;10007;10008;10009;10010 10006 4 499950000 423170000 554180000 585170000 269410000 214190000 696670000 752110000 IVAKIDTGAEKRAAE VNGKEFGQGRMTLTEIVAKIDTGAEKRAAE IVAKIDTGAEKRAAEELNKRDAYDVLIVGS E I V A E E 4 1 0 1 0 0 2 1 0 2 0 2 0 0 0 0 1 0 0 1 0 0 15 3 1 4 1570.8679 P35340 P35340 191 205 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3 0.00019425 56.569 By MS/MS By MS/MS By matching 1 1 1 5747400 3069100 1843600 0 0 0 834800 0 0 2244 348 2430 13109;13110;13111 10011;10012 10012 2 47155000 28115000 0 0 0 12653000 0 0 IVAKIDTGAEKRAAEE VNGKEFGQGRMTLTEIVAKIDTGAEKRAAE VAKIDTGAEKRAAEELNKRDAYDVLIVGSG E I V E E L 4 1 0 1 0 0 3 1 0 2 0 2 0 0 0 0 1 0 0 1 0 0 16 3 2 4 1699.9105 P35340 P35340 191 206 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3;4 5.1678E-129 194.12 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 2 3 2 3 7865300000 573010000 674250000 1349700000 1558400000 290100000 274980000 1372700000 1772100000 2245 348 2431 13112;13113;13114;13115;13116;13117;13118;13119;13120;13121;13122;13123;13124;13125;13126;13127;13128;13129;13130;13131 10013;10014;10015;10016;10017;10018;10019;10020;10021;10022;10023;10024;10025;10026;10027;10028;10029 10022 15 8804100000 10282000000 11468000000 11815000000 4466300000 4167700000 10565000000 10170000000 IVAKLFNE VANRRLAFARTRDNEIVAKLFNELGPRFAS ARTRDNEIVAKLFNELGPRFASRAGGYTRI E I V N E L 1 0 1 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 8 1 0 1 932.53312 P0AG44 P0AG44 75 82 rplQ 50S ribosomal protein L17 yes yes 2 0.0039866 77.282 By MS/MS 1 4516300 0 0 0 0 0 0 4516300 0 2246 257 2432 13132 10030 10030 1 0 0 0 0 0 0 34759000 0 IVAQLRIA GVTLHRMVKRADAGAIVAQLRIAIAPDDIA KRADAGAIVAQLRIAIAPDDIAITLHHKLC A I V I A I 2 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 8 1 0 1 882.56509 P77398 P77398 144 151 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.014519 64.776 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33980000 8192800 8070300 0 0 8101300 9615500 0 0 2247 432 2433 13133;13134;13135;13136 10031 10031 1 49456000 48301000 0 0 11534000 13707000 0 0 IVDSQAHLEPATR AAARAMKTMGFSDLRIVDSQAHLEPATRWV LRIVDSQAHLEPATRWVAHGSGDIIDNIKV R I V T R W 2 1 0 1 0 1 1 0 1 1 1 0 0 0 1 1 1 0 0 1 0 0 13 0 1 3 1435.7419 P37005 P37005 33 45 lasT Uncharacterized tRNA/rRNA methyltransferase LasT yes yes 2;3 4.4857E-10 100.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 92463000 22512000 28778000 0 0 22477000 18697000 0 0 2248 353 2434 13137;13138;13139;13140;13141;13142;13143;13144 10032;10033;10034;10035;10036;10037;10038;10039 10037 8 22512000 29457000 0 0 27114000 20712000 0 0 IVDYLLLSHLPKFE AAPWILRERGSGTREIVDYLLLSHLPKFEM EIVDYLLLSHLPKFEMAMELGNSEAIKHAV E I V F E M 0 0 0 1 0 0 1 0 1 1 4 1 0 1 1 1 0 0 1 1 0 0 14 1 0 1 1685.9392 P0ACR4 P0ACR4 200 213 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2;3 5.5095E-30 135.6 By MS/MS By MS/MS 2 1 101170000 0 0 0 0 40087000 61085000 0 0 2249 218 2435 13145;13146;13147 10040;10041;10042 10040 3 0 0 0 0 617170000 925840000 0 0 IVEIYGPESSGK SLDIALGAGGLPMGRIVEIYGPESSGKTTL MGRIVEIYGPESSGKTTLTLQVIAAAQREG R I V G K T 0 0 0 0 0 0 2 2 0 2 0 1 0 0 1 2 0 0 1 1 0 0 12 0 2 1 1277.6503 P0A7G6 P0A7G6 62 73 recA Protein RecA yes yes 2 2.7883E-13 117.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70696000 20304000 19108000 0 0 17832000 13453000 0 0 2250 104 2436 13148;13149;13150;13151 10043;10044;10045;10046 10043 4 20304000 19559000 0 0 21510000 14903000 0 0 IVELEAPQLPR LPTVLDVVENPKNLKIVELEAPQLPRSLDD KNLKIVELEAPQLPRSLDDAQIALAVINTT K I V P R S 1 1 0 0 0 1 2 0 0 1 2 0 0 0 2 0 0 0 0 1 0 0 11 0 2 3 1263.7187 P28635 P28635 179 189 metQ D-methionine-binding lipoprotein MetQ yes yes 2 0.00017078 81.594 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24814000 6909400 5329000 0 0 5828700 6746400 0 0 2251 326 2437 13152;13153;13154;13155 10047;10048;10049;10050 10050 4 6909400 5454800 0 0 7031200 7473500 0 0 IVELGAPEVSSLWHQQQK MACRETMTSSEFRERIVELGAPEVSSLWHQ LGAPEVSSLWHQQQKNPPFVLKHNLYEY__ R I V Q K N 1 0 0 0 0 3 2 1 1 1 2 1 0 0 1 2 0 1 0 2 0 0 18 0 2 2 2048.0691 P36881 P36881 116 133 yadI Putative phosphotransferase enzyme IIA component YadI yes yes 3 3.9917E-18 96.163 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29566000 8454800 9182200 0 0 5111400 6818000 0 0 2252 351 2438 13156;13157;13158;13159 10051;10052;10053;10054 10051 4 8454800 9399000 0 0 6165900 7552800 0 0 IVFGEAVK AVIKELERAGVIVPKIVFGEAVKIEGEWRA AGVIVPKIVFGEAVKIEGEWRALLVTEDMA K I V V K I 1 0 0 0 0 0 1 1 0 1 0 1 0 1 0 0 0 0 0 2 0 0 8 0 1 1 861.496 P27294 P27294 86 93 inaA Protein InaA yes yes 2 0.0036171 67.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 90968000 22393000 23200000 0 0 18969000 26407000 0 0 2253 321 2439 13160;13161;13162;13163 10055;10056;10057;10058 10058 4 22393000 23747000 0 0 22882000 29253000 0 0 IVGLQTEAPLKR ITSHDAGYINKQLEKIVGLQTEAPLKRALI LEKIVGLQTEAPLKRALIPFGGIKMIEGSC K I V K R A 1 1 0 0 0 1 1 1 0 1 2 1 0 0 1 0 1 0 0 1 0 0 12 1 1 2 1323.7874 P09373 P09373 97 108 pflB Formate acetyltransferase 1 yes yes 3 0.017372 24.071 By matching By matching By matching By MS/MS 1 1 1 1 17753000 5266800 4181100 0 0 3817800 4487300 0 0 2254 63 2440 13164;13165;13166;13167 10059 10059 1 5266800 4279800 0 0 4605400 4970900 0 0 IVIDSQNR TQALYPQQNLRQPIRIVIDSQNRVTPVHRI NLRQPIRIVIDSQNRVTPVHRIVQQPGETW R I V N R V 0 1 1 1 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 8 0 0 0 943.50869 P25539 P25539 230 237 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 0.0073421 57.281 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 29107000 7471300 10127000 0 0 5568500 5940500 0 0 2255 315 2441 13168;13169;13170;13171;13172;13173;13174 10060;10061 10061 2 9783400 12648000 0 0 6717200 6895500 0 0 IVIERPAK RQYLTKELAKASVSRIVIERPAKSIRVTIH AKASVSRIVIERPAKSIRVTIHTARPGIVI R I V A K S 1 1 0 0 0 0 1 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 8 1 1 2 924.57565 P0A7V3 P0A7V3 55 62 rpsC 30S ribosomal protein S3 yes yes 2 0.00034384 107.32 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 86984000 24536000 25053000 0 0 20522000 16873000 0 0 2256 129 2442 13175;13176;13177;13178 10062;10063;10064;10065 10065 4 24536000 25644000 0 0 24756000 18692000 0 0 IVIGSGPGGEGA ______________________________ YDAIVIGSGPGGEGAAMGLVKQGARVAVIE A I V G A A 1 0 0 0 0 0 1 5 0 2 0 0 0 0 1 1 0 0 0 1 0 0 12 0 1 1 1012.5189 P27306 P27306 10 21 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 0.017373 50.607 By MS/MS By MS/MS 1 1 6715500 0 0 0 0 3230900 3484600 0 0 2257 323 2443 13179;13180 10066 10066 1 0 0 0 0 4599800 4967300 0 0 IVILVTK PEGSVRELNPAGRRRIVILVTKEAHCLGDL LNPAGRRRIVILVTKEAHCLGDLLMKANYG R I V T K E 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 1 0 0 2 0 0 7 0 0 0 784.54223 P37051 P37051 87 93 purU Formyltetrahydrofolate deformylase yes yes 2 0.0025055 94.407 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 96450000 21309000 20269000 0 0 22772000 32099000 0 0 2258 354 2444 13181;13182;13183;13184 10067;10068;10069;10070 10069 4 21309000 20748000 0 0 27470000 35559000 0 0 IVINNQVGFTTSNPLDAR NMSKARGYEVGGTVRIVINNQVGFTTSNPL NNQVGFTTSNPLDARSTPYCTDIGKMVQAP R I V A R S 1 1 3 1 0 1 0 1 0 2 1 0 0 1 1 1 2 0 0 2 0 0 18 0 0 2 1958.0221 P0AFG3 P0AFG3 386 403 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 3.4172E-44 143.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38664000 6938200 6985600 0 0 13871000 10869000 0 0 2259 246 2445 13185;13186;13187;13188 10071;10072;10073;10074 10073 4 6938200 7150500 0 0 16733000 12041000 0 0 IVIRPLPGLPVIR ACITPISALNQPGKKIVIRPLPGLPVIRDL KKIVIRPLPGLPVIRDLVVDMGQFYAQYEK K I V I R D 0 2 0 0 0 0 0 1 0 3 2 0 0 0 3 0 0 0 0 2 0 0 13 1 0 3 1441.9497 P07014 P07014 89 101 sdhB Succinate dehydrogenase iron-sulfur subunit yes yes 3 1.1195E-07 88.187 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26696000 5552600 5670200 0 0 7057900 8415600 0 0 2260 56 2446 13189;13190;13191;13192 10075;10076;10077;10078 10077 4 5552600 5804000 0 0 8514000 9322600 0 0 IVKTQEELK QEKHVKDEQIEHWKKIVKTQEELKELLNKM IEHWKKIVKTQEELKELLNKMVNLKEKIKE K I V L K E 0 0 0 0 0 1 2 0 0 1 1 2 0 0 0 0 1 0 0 1 0 0 9 1 2 0 1086.6285 LSD1-FL-His LSD1-FL-His 436 444 yes yes 3 0.011452 38.303 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15622000 5557800 7539200 0 0 1433000 1092300 0 0 2261 24 2447 13193;13194;13195;13196 10079;10080 10079 2 5557800 7717100 0 0 1728600 1210000 0 0 IVKTQEELKELLNK QEKHVKDEQIEHWKKIVKTQEELKELLNKM KIVKTQEELKELLNKMVNLKEKIKELHQQY K I V N K M 0 0 1 0 0 1 3 0 0 1 3 3 0 0 0 0 1 0 0 1 0 0 14 2 3 0 1683.9771 LSD1-FL-His LSD1-FL-His 436 449 yes yes 3;4 2.1183E-50 154.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 380750000 205920000 139240000 0 0 12794000 22795000 0 0 2262 24 2448 13197;13198;13199;13200;13201;13202;13203 10081;10082;10083;10084;10085;10086 10081 6 205920000 142530000 0 0 15434000 25252000 0 0 IVLVGFR KIIDGKHFLPQHRERIVLVGFRRDLNLKAD FLPQHRERIVLVGFRRDLNLKADFTLRDIS R I V F R R 0 1 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 7 0 0 0 802.50651 P0AED9 P0AED9 279 285 dcm DNA-cytosine methyltransferase yes yes 2 9.0055E-25 148.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 320610000 83347000 88930000 0 0 81285000 67052000 0 0 2263 235 2449 13204;13205;13206;13207 10087;10088;10089;10090 10088 4 83347000 91029000 0 0 98054000 74279000 0 0 IVPGQGR DDLKAIQKQFHHLVRIVPGQGRIIWPENDI KQFHHLVRIVPGQGRIIWPENDINLKQTMA R I V G R I 0 1 0 0 0 1 0 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 7 0 0 1 725.41842 P37773 P37773 210 216 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.0095527 66.994 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37460000 12072000 13056000 0 0 5140200 7191800 0 0 2264 360 2450 13208;13209;13210;13211 10091;10092;10093 10091 2 12072000 13364000 0 0 6200700 7966900 0 0 IVPNSAEE EQLLRLKKYKVPQLEIVPNSAEERLHSMKE YKVPQLEIVPNSAEERLHSMKEGIHAQQKE E I V E E R 1 0 1 0 0 0 2 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 8 0 1 2 857.41306 CON__P02662 CON__P02662 111 118 yes yes 1 1.6204E-11 106.35 By matching By matching By MS/MS By MS/MS 6 6 4 5 56186000 10733000 10958000 0 0 16375000 18120000 0 0 + 2265 6 2451;2452 13212;13213;13214;13215;13216;13217;13218;13219;13220;13221;13222;13223;13224;13225;13226;13227;13228;13229;13230;13231;13232 10094;10095;10096 10095 0 0 105290000 91737000 0 0 193850000 162080000 0 0 IVQDADRLEALGAIGLAR HSFSAQIAPLTTEAKIVQDADRLEALGAIG DADRLEALGAIGLARVFAVSGALGVALFDG K I V A R V 4 2 0 2 0 1 1 2 0 2 3 0 0 0 0 0 0 0 0 1 0 0 18 1 1 4 1880.048 P46144 P46144 122 139 yedJ Uncharacterized protein YedJ yes yes 3 1.2664E-36 132.59 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 56951000 18744000 11749000 0 0 11512000 14946000 0 0 2266 371 2453 13233;13234;13235;13236 10097;10098;10099;10100 10097 4 18744000 12026000 0 0 13887000 16557000 0 0 IVQFFAQRPQVQER YIPKDSVIGLSKINRIVQFFAQRPQVQERL RIVQFFAQRPQVQERLTQQILIALQTLLGT R I V E R L 1 2 0 0 0 4 1 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 14 1 1 2 1744.9373 P0A6T5 P0A6T5 141 154 folE GTP cyclohydrolase 1 yes yes 3 8.9619E-12 101.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 102640000 33222000 22618000 0 0 22713000 24092000 0 0 2267 81 2454 13237;13238;13239;13240 10101;10102;10103;10104 10101 4 33222000 23151000 0 0 27398000 26689000 0 0 IVQMHANKR TVLNSVKAARERFGRIVQMHANKREEIKEV RERFGRIVQMHANKREEIKEVRAGDIAAAI R I V K R E 1 1 1 0 0 1 0 0 1 1 0 1 1 0 0 0 0 0 0 1 0 0 9 1 0 1 1095.5971 P0A6M8 P0A6M8 363 371 fusA Elongation factor G yes yes 3 0.0061195 41.029 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6600600 2194100 3382700 0 0 550250 473600 0 0 2268 76 2455 13241;13242;13243;13244 10105;10106;10107 10106 2 2194100 3462600 0 0 663770 524640 0 0 IVQQPGETWFAR RIVIDSQNRVTPVHRIVQQPGETWFARTQE VHRIVQQPGETWFARTQEDSREWPETVRTL R I V A R T 1 1 0 0 0 2 1 1 0 1 0 0 0 1 1 0 1 1 0 1 0 0 12 0 1 2 1430.7306 P25539 P25539 244 255 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 7.6959E-07 93.111 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26751000 7027600 8353500 0 0 5558400 5811500 0 0 2269 315 2456 13245;13246;13247;13248 10108;10109;10110;10111 10108 4 7027600 8550600 0 0 6705100 6437900 0 0 IVQVPFAELVK FFPDPWHKARHNKRRIVQVPFAELVKSKLQ NKRRIVQVPFAELVKSKLQLGGVFHMATDW R I V V K S 1 0 0 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 0 3 0 0 11 0 1 2 1241.7384 P0A8I5 P0A8I5 156 166 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 9.477E-29 135.43 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 912450000 0 385040000 0 0 201530000 325880000 0 0 2270 144 2457 13249;13250;13251;13252 10112;10113;10114;10115;10116 10112 5 0 394130000 0 0 243110000 361000000 0 0 IVRNAAFKLLPE AGREIRGNRVTVDGEIVRNAAFKLLPEHDV DGEIVRNAAFKLLPEHDVAYDGNPLAQQHG E I V P E H 2 1 1 0 0 0 1 0 0 1 2 1 0 1 1 0 0 0 0 1 0 0 12 2 0 3 1369.8082 P0AA43 P0AA43 33 44 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 0.00062399 48.741 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 1 2 2 302810000 12367000 10210000 22532000 26648000 7433100 6218900 88451000 128950000 2271 183 2458 13253;13254;13255;13256;13257;13258;13259;13260;13261;13262;13263;13264;13265;13266 10117;10118;10119;10120;10121;10122;10123;10124;10125;10126 10117 10 190020000 155700000 191460000 202030000 114440000 94257000 680740000 740040000 IVSEFGR ______________________________ LSTEATAKIVSEFGRDANDTGSTEVQVALL K I V G R D 0 1 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 7 0 1 0 806.42865 P0ADZ4 P0ADZ4 11 17 rpsO 30S ribosomal protein S15 yes yes 2 1.173E-18 144.29 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 7961600000 2313500000 2418700000 0 0 1747900000 1481500000 0 0 2272 231 2459 13267;13268;13269;13270;13271;13272;13273;13274;13275;13276;13277 10127;10128;10129;10130 10127 4 2361400000 2519100000 0 0 2159100000 1679000000 0 0 IVTIGSKEGLA YQDRYDVEIDPESEAIVTIGSKEGLAHLML ESEAIVTIGSKEGLAHLMLATLDHGDTVLV A I V L A H 1 0 0 0 0 0 1 2 0 2 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1 0 1086.6285 P77434 P77434 102 112 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 0.00086326 84.213 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 41709000 2019900 2197200 0 0 23311000 13462000 718890 0 2273 433 2460 13278;13279;13280;13281;13282 10131;10132 10132 1 12193000 13150000 0 0 33187000 19191000 5532800 0 IVTNNLNVANTLMVK PEAVAHALLNHSNLRIVTNNLNVANTLMVK IVTNNLNVANTLMVKEDFRIILAGGELRSR R I V V K E 1 0 4 0 0 0 0 0 0 1 2 1 1 0 0 0 2 0 0 3 0 0 15 0 0 1 1642.9076 P0ACL0 P0ACL0 118 132 glpR Glycerol-3-phosphate regulon repressor yes yes 2 4.6066E-77 193.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 138030000 41079000 23193000 0 0 38275000 35483000 0 0 2274 215 2461;2462 13283;13284;13285;13286;13287;13288;13289 10133;10134;10135;10136;10137;10138;10139 10136 197 7 41079000 23740000 0 0 46171000 39307000 0 0 IVVEAAR PNAETMKQTESHAVKIVVEAARRLL_____ QTESHAVKIVVEAARRLL____________ K I V A R R 2 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 7 0 1 2 756.44939 P12758 P12758 244 250 udp Uridine phosphorylase yes yes 2 0.0035399 62.714 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2275 278 2463 13290;13291 10140;10141 10140 2 0 0 0 0 0 0 0 0 IWDSTDALELK SRPIQLPFIPHEDPRIWDSTDALELKEVPE EDPRIWDSTDALELKEVPERLLVMGGGIIG R I W L K E 1 0 0 2 0 0 1 0 0 1 2 1 0 0 0 1 1 1 0 0 0 0 11 0 1 1 1289.6503 P0A9P0 P0A9P0 162 172 lpdA Dihydrolipoyl dehydrogenase yes yes 2 2.7508E-06 107.21 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 46638000 12577000 15416000 0 0 6590000 12055000 0 0 2276 172 2464 13292;13293;13294;13295;13296 10142;10143;10144;10145;10146 10144 5 20111000 15779000 0 0 7949600 13355000 0 0 IWFSGHDITR LLKLICGIERPSAGKIWFSGHDITRLKNRE PSAGKIWFSGHDITRLKNREVPFLRRQIGM K I W T R L 0 1 0 1 0 0 0 1 1 2 0 0 0 1 0 1 1 1 0 0 0 0 10 0 0 0 1230.6146 P0A9R7 P0A9R7 59 68 ftsE Cell division ATP-binding protein FtsE yes yes 2;3 3.5022E-12 88.056 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 3 39294000 7445600 7309400 0 0 0 24539000 0 0 2277 174 2465 13297;13298;13299;13300;13301;13302;13303 10147;10148;10149;10150;10151 10148 5 7445600 7481900 0 0 0 27321000 0 0 IWSPETDLLLASR REGRLSGVLNGVDEKIWSPETDLLLASRYT EKIWSPETDLLLASRYTRDTLEDKAENKRQ K I W S R Y 1 1 0 1 0 0 1 0 0 1 3 0 0 0 1 2 1 1 0 0 0 0 13 0 1 2 1499.7984 P0A6U8 P0A6U8 252 264 glgA Glycogen synthase yes yes 2 2.0813E-10 113.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 122230000 46774000 48807000 0 0 15149000 11502000 0 0 2278 83 2466 13304;13305;13306;13307 10152;10153;10154 10154 3 46774000 49959000 0 0 18274000 12742000 0 0 IYADKLEQEK PLMYQKIKKHPTPRKIYADKLEQEKVATLE PTPRKIYADKLEQEKVATLEDATEMVNLYR K I Y E K V 1 0 0 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 1 0 0 0 10 1 2 1 1235.6398 P0AFG3 P0AFG3 486 495 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 1.2433E-75 182.39 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 80774000 17369000 17090000 0 0 22434000 23882000 0 0 2279 246 2467 13308;13309;13310;13311;13312;13313;13314;13315 10155;10156;10157;10158;10159;10160;10161;10162 10162 8 17369000 17493000 0 0 27062000 26456000 0 0 IYASSTIGNYILPAVIAR VEIEQLFREDNGAIRIYASSTIGNYILPAV SSTIGNYILPAVIARYRHDYPQLPIELSVG R I Y A R Y 3 1 1 0 0 0 0 1 0 4 1 0 0 0 1 2 1 0 2 1 0 0 18 0 0 4 1921.0673 P0ACR4 P0ACR4 93 110 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 0 293.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 932040000 263240000 287090000 0 0 199240000 182470000 0 0 2280 218 2468 13316;13317;13318;13319 10163;10164;10165;10166 10164 4 263240000 293870000 0 0 240340000 202140000 0 0 IYDSDSILSMHHEPR SRPYHPTDVDFTHPRIYDSDSILSMHHEPR IYDSDSILSMHHEPRHVLIYGAGVIGCEYA R I Y P R H 0 1 0 2 0 0 1 0 2 2 1 0 1 0 1 3 0 0 1 0 0 0 15 0 1 1 1798.8308 P27306 P27306 163 177 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3;4 1.5288E-30 130.98 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 263980000 65562000 75107000 0 0 58144000 65167000 0 0 2281 323 2469 13320;13321;13322;13323;13324;13325;13326;13327 10167;10168;10169;10170;10171;10172;10173;10174 10168 8 65562000 76879000 0 0 70140000 72190000 0 0 IYEQPNAIKNTLTGRISHGQVDLSE DAGDKGIYRHYMQKEIYEQPNAIKNTLTGR TLTGRISHGQVDLSELGPNADELLSKVEHI E I Y S E L 1 1 2 1 0 2 2 2 1 3 2 1 0 0 1 2 2 0 1 1 0 0 25 2 1 2 2782.425 P17169 P17169 257 281 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 3.6298E-70 134.91 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 2 622470000 5844200 6424600 3954700 4072300 311670000 238640000 0 51874000 2282 288 2470 13328;13329;13330;13331;13332;13333;13334;13335;13336;13337 10175;10176;10177;10178;10179;10180;10181;10182 10178 8 89794000 97976000 33603000 30874000 4798400000 3616900000 0 297690000 IYEQPNAIKNTLTGRISHGQVDLSELGPNADE DAGDKGIYRHYMQKEIYEQPNAIKNTLTGR HGQVDLSELGPNADELLSKVEHIQILACGT E I Y D E L 2 1 3 2 0 2 3 3 1 3 3 1 0 0 2 2 2 0 1 1 0 0 32 2 2 4 3478.7328 P17169 P17169 257 288 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 1.6814E-21 86.869 By MS/MS By MS/MS By MS/MS 1 2 2 96684000 0 1309500 0 0 56338000 39037000 0 0 2283 288 2471 13338;13339;13340;13341;13342 10183;10184;10185 10185 3 0 19970000 0 0 867370000 591670000 0 0 IYGTAWADKK GAYWRGDSNNKMLQRIYGTAWADKKALNAY KMLQRIYGTAWADKKALNAYLQRLEEAAKR R I Y K K A 2 0 0 1 0 0 0 1 0 1 0 2 0 0 0 0 1 1 1 0 0 0 10 1 0 2 1151.5975 P0A8M3 P0A8M3 218 227 thrS Threonine--tRNA ligase yes yes 2 0.0049698 68.224 By matching By matching By matching By MS/MS 1 1 1 1 36118000 6727500 12671000 0 0 7264700 9455500 0 0 2284 147 2472 13343;13344;13345;13346 10186 10186 0 6727500 12970000 0 0 8763500 10475000 0 0 IYGVLER SDYGVQLREKQKVRRIYGVLERQFRNYYKE REKQKVRRIYGVLERQFRNYYKEAARLKGN R I Y E R Q 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 7 0 1 0 848.4756 P0A7V8 P0A7V8 64 70 rpsD 30S ribosomal protein S4 yes yes 2 3.5025E-11 130.05 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 295810000 123250000 137300000 17599000 17656000 0 0 0 0 2285 130 2473 13347;13348;13349;13350 10187;10188;10189 10187 3 123250000 140540000 149540000 133860000 0 0 0 0 IYQRIQAE IGVNAPKEVSVHREEIYQRIQAEKSQQSSY VSVHREEIYQRIQAEKSQQSSY________ E I Y A E K 1 1 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 8 1 0 1 1019.54 P69913 P69913 47 54 csrA Carbon storage regulator yes yes 2 1.1979E-06 117.17 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 71522000 7595700 0 10523000 10468000 4408700 4022900 17569000 16935000 2286 405 2474 13351;13352;13353;13354;13355;13356;13357;13358 10190;10191;10192;10193;10194;10195;10196 10190 6 116710000 0 89410000 79366000 67875000 60973000 135210000 97188000 IYQRPFGGQSK LEHMGLPFSRLDDGRIYQRPFGGQSKNFGG DDGRIYQRPFGGQSKNFGGEQAARTAAAAD R I Y S K N 0 1 0 0 0 2 0 2 0 1 0 1 0 1 1 1 0 0 1 0 0 0 11 1 0 1 1279.6673 P0AC41 P0AC41 114 124 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2;3 2.2424E-40 159.79 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 3 260250000 60350000 94306000 0 0 51009000 54590000 0 0 2287 203 2475 13359;13360;13361;13362;13363;13364;13365;13366;13367;13368;13369 10197;10198;10199;10200;10201;10202;10203;10204 10204 8 105030000 139210000 0 0 61533000 87057000 0 0 IYQSTTNAHINTGDGVGMAIR FKARATVLATGGAGRIYQSTTNAHINTGDG NAHINTGDGVGMAIRAGVPVQDMEMWQFHP R I Y I R A 2 1 2 1 0 1 0 3 1 3 0 0 1 0 0 1 3 0 1 1 0 0 21 0 0 2 2218.0801 P0AC41 P0AC41 208 228 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 1.8557E-85 168.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 159740000 51069000 42836000 0 0 29420000 36418000 0 0 2288 203 2476 13370;13371;13372;13373 10205;10206;10207;10208 10205 4 51069000 43847000 0 0 35490000 40343000 0 0 IYRALIATPSISATEE ______________________________ YRALIATPSISATEEALDQSNADLITLLAD E I Y E E A 3 1 0 0 0 0 2 0 0 3 1 0 0 0 1 2 2 0 1 0 0 0 16 1 1 4 1733.92 P23908 P23908 11 26 argE Acetylornithine deacetylase yes yes 2 3.8065E-31 145.28 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 146470000 12767000 24099000 7371100 12101000 18747000 21978000 22537000 26867000 2289 308 2477 13374;13375;13376;13377;13378;13379;13380;13381 10209;10210;10211;10212;10213;10214;10215;10216 10212 8 196170000 367510000 62631000 91743000 288620000 333120000 173450000 154190000 IYYITADSYAAAK SLEDYVSRMKEGQEKIYYITADSYAAAKSS EKIYYITADSYAAAKSSPHLELLRKKGIEV K I Y A K S 4 0 0 1 0 0 0 0 0 2 0 1 0 0 0 1 1 0 3 0 0 0 13 0 0 4 1448.7187 P0A6Z3 P0A6Z3 430 442 htpG Chaperone protein HtpG yes yes 2 6.9374E-14 117.67 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 61287000 25637000 16954000 0 0 596200 18100000 0 0 2290 88 2478 13382;13383;13384;13385 10217;10218;10219;10220;10221 10217 5 25637000 17354000 0 0 848800 20051000 0 0 KAATEPAHRPAFFRTLLE ______________________________ TEPAHRPAFFRTLLESTVWVPGTAAQGEAV E K A L E S 4 2 0 0 0 0 2 0 1 0 2 1 0 2 2 0 2 0 0 0 0 0 18 3 1 6 2054.1061 P0AFZ1 P0AFZ1 14 31 sseB Protein SseB yes yes 3;4 0.0010062 32.995 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 1 92472000 8316000 10603000 0 0 12326000 11847000 18275000 31105000 2291 253 2479 13386;13387;13388;13389;13390;13391;13392;13393;13394;13395 10222;10223;10224;10225;10226;10227;10228;10229 10224 8 127770000 161700000 0 0 189760000 179560000 140650000 178510000 KAAVLVK KKVSQALDILTYTNKKAAVLVKKVLESAIA DILTYTNKKAAVLVKKVLESAIANAEHNDG K K A V K K 2 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 7 1 0 2 727.49561 P61175 P61175 42 48 rplV 50S ribosomal protein L22 yes yes 2 0.0071407 62.715 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10483000 3964500 4325400 0 0 1345800 847810 0 0 2292 385 2480 13396;13397;13398;13399 10230 10230 0 3964500 4427500 0 0 1623400 939180 0 0 KADEIQIYK AGQNEVATRFNTMTKKADEIQIYKYVVHNV FNTMTKKADEIQIYKYVVHNVAHRFGKTAT K K A Y K Y 1 0 0 1 0 1 1 0 0 2 0 2 0 0 0 0 0 0 1 0 0 0 9 1 1 1 1106.5972 P0A9C5 P0A9C5 232 240 glnA Glutamine synthetase yes yes 2 0.0056037 56.729 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14818000 4735500 3670000 0 0 3141200 3271100 0 0 2293 164 2481 13400;13401;13402;13403 10231 10231 1 4735500 3756600 0 0 3789300 3623600 0 0 KAEQWATGLK DRTNLQEAQPLGNGKKAEQWATGLKYDANN LGNGKKAEQWATGLKYDANNIYLAANYGET K K A L K Y 2 0 0 0 0 1 1 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 10 1 1 2 1130.6084 P02931 P02931 232 241 ompF Outer membrane protein F yes yes 2 2.4871E-10 119.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22487000 3377600 3935100 0 0 7679500 7494500 0 0 2294 38 2482 13404;13405;13406;13407 10232;10233;10234;10235 10235 3 3377600 4028000 0 0 9263800 8302200 0 0 KAFYGSVARLAAE YEISAIFTHTDNPGEKAFYGSVARLAAERG GEKAFYGSVARLAAERGIPVYAPDNVNHPL E K A A E R 4 1 0 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 1 0 0 13 2 0 4 1381.7354 P77398 P77398 39 51 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 2.3766E-11 105 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 270110000 21597000 26805000 32406000 34448000 20728000 18749000 46272000 69103000 2295 432 2483 13408;13409;13410;13411;13412;13413;13414;13415;13416;13417;13418;13419;13420;13421;13422;13423 10236;10237;10238;10239;10240;10241;10242;10243;10244;10245;10246;10247;10248;10249 10237 13 331830000 408780000 275350000 261170000 319120000 284170000 356120000 396570000 KAGAAQTIVASQQR DMDVDKPGKDSYELRKAGAAQTIVASQQRW RKAGAAQTIVASQQRWALMTETPDEEELDL R K A Q R W 4 1 0 0 0 3 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 14 1 0 4 1427.7845 P32125 P32125 62 75 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 2;3 5.9786E-10 77.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 48401000 15185000 15330000 0 0 7502400 10383000 0 0 2296 337 2484 13424;13425;13426;13427;13428;13429;13430;13431 10250;10251;10252;10253;10254;10255;10256 10253 7 15185000 15692000 0 0 9050200 11502000 0 0 KAGFVTR RALMEYDESLRSELRKAGFVTRDARQVERK ESLRSELRKAGFVTRDARQVERKKVGLRKA R K A T R D 1 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 7 1 0 1 777.44972 P0A7X3 P0A7X3 100 106 rpsI 30S ribosomal protein S9 yes yes 2 9.7023E-05 85.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40434000 16140000 15061000 0 0 4579000 4653800 0 0 2297 133 2485 13432;13433;13434;13435 10257;10258 10258 0 16140000 15416000 0 0 5523600 5155300 0 0 KAGLRYSANNYVKWKDE LGSPVKQIRPLSDEEKAGLRYSANNYVKWK GLRYSANNYVKWKDEYLDQGNQTQP_____ E K A D E Y 2 1 2 1 0 0 1 1 0 0 1 3 0 0 0 1 0 1 2 1 0 0 17 4 0 2 2041.0381 P0A9W9 P0A9W9 158 174 yrdA Protein YrdA yes yes 3;4 0.0013388 34.094 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 2 2 1 1 3 1 53259000 10295000 10518000 11794000 4214900 3389500 7420000 5627200 0 2298 179 2486 13436;13437;13438;13439;13440;13441;13442;13443;13444;13445;13446;13447 10259;10260;10261;10262;10263;10264;10265 10259 7 158180000 160400000 100210000 31956000 52185000 101110000 43308000 0 KAGNVAADGVIK AIENMRKSGAIKAAKKAGNVAADGVIKTKI AAKKAGNVAADGVIKTKIDGNYGIILEVNC K K A I K T 3 0 1 1 0 0 0 2 0 1 0 2 0 0 0 0 0 0 0 2 0 0 12 1 0 3 1141.6455 P0A6P1 P0A6P1 52 63 tsf Elongation factor Ts yes yes 2 0.020562 37.696 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13495000 3190200 3845500 0 0 3190200 3268900 0 0 2299 77 2487 13448;13449;13450;13451 10266;10267 10266 2 3190200 3936200 0 0 3848400 3621200 0 0 KAINVSDQVPAK ANQRQNFTRFVVLARKAINVSDQVPAKTTL LARKAINVSDQVPAKTTLLMATGQQAGALV R K A A K T 2 0 1 1 0 1 0 0 0 1 0 2 0 0 1 1 0 0 0 2 0 0 12 1 0 3 1268.7089 P0A9J8 P0A9J8 286 297 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 3.274E-235 251.43 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 806240000 228970000 256400000 0 0 152320000 168550000 0 0 2300 166 2488 13452;13453;13454;13455;13456;13457;13458;13459 10268;10269;10270;10271;10272;10273;10274;10275 10271 8 228970000 262450000 0 0 183740000 186720000 0 0 KAKELRRVVEP AGSLVRHEIIKTTLPKAKELRRVVEPLITL TTLPKAKELRRVVEPLITLAKTDSVANRRL P K A E P L 1 2 0 0 0 0 2 0 0 0 1 2 0 0 1 0 0 0 0 2 0 0 11 4 2 1 1323.7987 P0AG44 P0AG44 40 50 rplQ 50S ribosomal protein L17 yes yes 3 0.023175 15.202 By MS/MS By MS/MS By MS/MS 1 1 1 13875000 2074500 2133500 0 0 0 9666500 0 0 2301 257 2489 13460;13461;13462 10276 10276 0 12523000 12769000 0 0 0 13780000 0 0 KASTPAQRQQASLE EGNSAGKETSAKSEEKASTPAQRQQASLEE EKASTPAQRQQASLEEQNNDALSPAIRRLL E K A L E E 3 1 0 0 0 3 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 14 2 0 4 1513.7849 P0AFG6 P0AFG6 94 107 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 3 0.0013975 50.155 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 73648000 4969400 5470300 11567000 13528000 1896500 1856800 13845000 20515000 2302 247 2490 13463;13464;13465;13466;13467;13468;13469;13470 10277;10278;10279 10279 3 76354000 83423000 98281000 102560000 29199000 28143000 106560000 117730000 KASTPAQRQQASLEE EGNSAGKETSAKSEEKASTPAQRQQASLEE KASTPAQRQQASLEEQNNDALSPAIRRLLA E K A E E Q 3 1 0 0 0 3 2 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 15 2 1 4 1642.8275 P0AFG6 P0AFG6 94 108 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 3 0.0023057 42.317 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 26010000 1256500 1524600 3867000 6702100 0 0 6122600 6537100 2303 247 2491 13471;13472;13473;13474;13475;13476 10280;10281;10282;10283 10281 4 19306000 23250000 32857000 50812000 0 0 47121000 37516000 KATLEDLGQAKRVVINKDTTTIIDGVGE TGGTVISEEIGMELEKATLEDLGQAKRVVI VINKDTTTIIDGVGEEAAIQGRVAQIRQQI E K A G E E 2 1 1 3 0 1 2 3 0 3 2 3 0 0 0 0 4 0 0 3 0 0 28 4 1 2 2983.619 P0A6F5 P0A6F5 311 338 groL 60 kDa chaperonin yes yes 4 4.6633E-22 90.633 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 66059000 841340 851880 0 0 32485000 31881000 0 0 2304 68 2492 13477;13478;13479;13480 10284;10285;10286 10284 3 12927000 12991000 0 0 500130000 483200000 0 0 KATLEDLGQAKRVVINKDTTTIIDGVGEE TGGTVISEEIGMELEKATLEDLGQAKRVVI INKDTTTIIDGVGEEAAIQGRVAQIRQQIE E K A E E A 2 1 1 3 0 1 3 3 0 3 2 3 0 0 0 0 4 0 0 3 0 0 29 4 2 2 3112.6616 P0A6F5 P0A6F5 311 339 groL 60 kDa chaperonin yes yes 3;4 7.5788E-127 173.35 By MS/MS By MS/MS 2 2 261220000 0 0 0 0 148140000 113070000 0 0 2305 68 2493 13481;13482;13483;13484 10287;10288;10289;10290 10287 4 0 0 0 0 2280800000 1713800000 0 0 KCDVVLPLVAIATPIEYTR GDISIHSEWIEYHVKKCDVVLPLVAIATPI VLPLVAIATPIEYTRNPLRVFELDFEENLR K K C T R N 2 1 0 1 1 0 1 0 0 2 2 1 0 0 2 0 2 0 1 3 0 0 19 1 1 4 2157.1868 P77398 P77398 382 400 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 4.2734E-90 213.7 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 4265300000 1298500000 826070000 0 0 903150000 1237500000 0 0 2306 432 2494 13485;13486;13487;13488;13489;13490;13491;13492 10291;10292;10293;10294;10295;10296;10297 10296 7 1298500000 845570000 0 0 1089500000 1370900000 0 0 KDAEAWFNEK NNMRSQYEQLAEQNRKDAEAWFNEKSKELT AEQNRKDAEAWFNEKSKELTTEIDNNIEQI R K D E K S 2 0 1 1 0 0 2 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 10 1 2 2 1236.5775 CON__P13645;CON__Q7Z3Y7 CON__P13645 334 343 yes no 2;3 1.1568E-14 129.16 By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 44059000 14451000 5918000 0 0 10774000 12917000 0 0 + 2307 12 2495 13493;13494;13495;13496;13497;13498;13499;13500 10298;10299 10298 2 14451000 6057700 0 0 12996000 14309000 0 0 KDAIATVNKQE RAISLSVRAKDEADEKDAIATVNKQEDANF EADEKDAIATVNKQEDANFSNNAMAEAFKA E K D Q E D 2 0 1 1 0 1 1 0 0 1 0 2 0 0 0 0 1 0 0 1 0 0 11 2 0 2 1215.6459 P0AG67 P0AG67 528 538 rpsA 30S ribosomal protein S1 yes yes 2 1.9095E-131 236.69 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 82047000 7003700 11385000 12895000 12828000 4430200 3022500 11465000 19017000 2308 261 2496 13501;13502;13503;13504;13505;13506;13507;13508 10300;10301;10302;10303;10304 10304 5 107610000 173630000 109570000 97256000 68206000 45810000 88236000 109140000 KDDDVVDAEFEEVKDKK AQQQTAGADASANNAKDDDVVDAEFEEVKD DDVVDAEFEEVKDKK_______________ A K D K K - 1 0 0 5 0 0 3 0 0 0 0 4 0 1 0 0 0 0 0 3 0 0 17 3 3 1 2007.9637 P0A6Y8 P0A6Y8 622 638 dnaK Chaperone protein DnaK yes yes 4 0.023156 14.77 By matching By MS/MS By MS/MS 1 1 1 4182900 589890 709870 0 0 0 2883200 0 0 2309 86 2497 13509;13510;13511 10305 10305 1 3560900 4248600 0 0 0 4110000 0 0 KDELALALAR GAKLIRIRDNGCGIKKDELALALARHATSK GCGIKKDELALALARHATSKIASLDDLEAI K K D A R H 3 1 0 1 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 1 1 3 1098.6397 P23367 P23367 65 74 mutL DNA mismatch repair protein MutL yes yes 2 5.6538E-07 126.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71214000 22780000 17302000 0 0 12646000 18487000 0 0 2310 302 2498 13512;13513;13514;13515 10306;10307;10308;10309 10308 3 22780000 17710000 0 0 15255000 20479000 0 0 KDEPTQSSDPGSQPNSEEQAGGEER VSRLDVVNFISHGTRKDEPTQSSDPGSQPN GSQPNSEEQAGGEERMENFTTNLNQLARVG R K D E R M 1 1 1 2 0 3 5 3 0 0 0 1 0 0 3 4 1 0 0 0 0 0 25 1 5 4 2658.1277 P0ABH9 P0ABH9 144 168 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 3 1.2111E-09 55.881 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13291000 4737800 3749200 0 0 2430300 2373300 0 0 2311 201 2499 13516;13517;13518;13519 10310;10311;10312;10313 10311 4 4737800 3837700 0 0 2931700 2629100 0 0 KDIENQYETQITQIEHEVSSSGQEVQSSAK NDMRQEYEQLIAKNRKDIENQYETQITQIE HEVSSSGQEVQSSAKEVTQLRHGVQELEIE R K D A K E 1 0 1 1 0 5 5 1 1 3 0 2 0 0 0 5 2 0 1 2 0 0 30 1 5 1 3391.6016 CON__P35527 CON__P35527 339 368 yes yes 4 4.3134E-176 199.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 74580000 13459000 8750800 0 0 21977000 30393000 0 0 + 2312 15 2500 13520;13521;13522;13523 10314;10315;10316;10317 10317 4 13459000 8957400 0 0 26511000 33668000 0 0 KDILNPANKLP LAASGRPGPVVVDLPKDILNPANKLPYVWP VDLPKDILNPANKLPYVWPESVSMRSYNPT P K D L P Y 1 0 2 1 0 0 0 0 0 1 2 2 0 0 2 0 0 0 0 0 0 0 11 2 0 2 1221.7081 P00893 P00893 163 173 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 0.023143 53.751 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11934000 1082900 1517100 0 0 7414700 1919400 0 0 2313 29 2501 13524;13525;13526;13527 10318 10318 1 6536900 9080000 0 0 10556000 2736200 0 0 KDKVSNQQDDMTKNAQAE AKREAAEQAKREAAEKDKVSNQQDDMTKNA VSNQQDDMTKNAQAEKARREQEAAELKRKA E K D A E K 2 0 2 3 0 3 1 0 0 0 0 3 1 0 0 1 1 0 0 1 0 0 18 3 0 2 2048.9433 P0A705 P0A705 155 172 infB Translation initiation factor IF-2 yes yes 3 0.00082978 48.547 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 54145000 7215000 7621200 8153700 8661800 2708000 4361900 8458400 6964600 2314 90 2502 13528;13529;13530;13531;13532;13533;13534;13535 10319;10320;10321 10321 3 110860000 116220000 69280000 65670000 41693000 66112000 65098000 39969000 KDLTKPAVLE DTAEQFAKGVQLHNEKDLTKPAVLEVITPT QLHNEKDLTKPAVLEVITPTQVRLTISEGR E K D L E V 1 0 0 1 0 0 1 0 0 0 2 2 0 0 1 0 1 0 0 1 0 0 10 2 0 2 1112.6441 P0AA43 P0AA43 158 167 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 1.3539E-47 183.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 1 1 4331000000 196910000 208010000 729080000 861690000 143880000 122990000 836500000 1231900000 2315 183 2503 13536;13537;13538;13539;13540;13541;13542;13543;13544;13545 10322;10323;10324;10325;10326 10322 5 3025500000 3172200000 6194900000 6533000000 2215200000 1864100000 6437900000 7069800000 KDLVVSLA ______________________________ ______________________________ A K D L A Y 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 2 0 0 8 1 0 0 843.50657 P0A9K9 P0A9K9 5 12 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 0.006659 72.492 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1961400000 161750000 165460000 12138000 0 530860000 1069500000 0 21659000 2316 169 2504 13546;13547;13548;13549;13550;13551 10327;10328 10327 2 976410000 990300000 103130000 0 755780000 1524600000 0 124300000 KDPSLSLYAIPDGDVK DQLNITPPPDVNGLKKDPSLSLYAIPDGDV DPSLSLYAIPDGDVKGRVVAILLNDEVRSA K K D V K G 1 0 0 3 0 0 0 1 0 1 2 2 0 0 2 2 0 0 1 1 0 0 16 1 0 3 1716.8934 P21179 P21179 584 599 katE Catalase HPII yes yes 3 0.00019019 58.159 By MS/MS By MS/MS By MS/MS 1 1 1 22711000 13122000 0 0 0 0 9589200 0 0 2317 293 2505 13552;13553;13554 10329;10330;10331 10331 3 13122000 0 0 0 0 10623000 0 0 KDQGIDLR DFDSRLINYLVEEFKKDQGIDLRNDPLAMQ YLVEEFKKDQGIDLRNDPLAMQRLKEAAEK K K D L R N 0 1 0 2 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 8 1 0 0 943.50869 P0A6Y8 P0A6Y8 246 253 dnaK Chaperone protein DnaK yes yes 2 1.1622E-41 142.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 2318 86 2506 13555;13556;13557;13558 10332;10333;10334;10335 10333 4 0 0 0 0 0 0 0 0 KDVDGAYMTK INKRTNAENEFVTIKKDVDGAYMTKVDLQA FVTIKKDVDGAYMTKVDLQAKLDNLQQEID K K D T K V 1 0 0 2 0 0 0 1 0 0 0 2 1 0 0 0 1 0 1 1 0 0 10 1 0 1 1126.5329 CON__P04264 CON__P04264 289 298 yes yes 2 3.1643E-10 117.7 By matching By MS/MS By MS/MS 1 1 1 47904000 0 14180000 0 0 16838000 16887000 0 0 + 2319 9 2507 13559;13560;13561 10336 10336 1 0 14514000 0 0 20311000 18707000 0 0 KDVDNAYMIK INKRTAAENDFVTLKKDVDNAYMIKVELQS FVTLKKDVDNAYMIKVELQSKVDLLNQEIE K K D I K V 1 0 1 2 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 10 1 0 1 1195.5907 CON__P35908v2;CON__P35908 CON__P35908v2 287 296 yes no 2 4.8532E-05 118.71 By matching By matching By MS/MS 1 1 1 23552000 0 6525800 0 0 9985200 7041400 0 0 + 2320 16 2508 13562;13563;13564 10337 10337 1 0 6679800 0 0 12045000 7800300 0 0 KEELLTTQEELQK KRVFPAIDYNRSGTRKEELLTTQEELQKMW TRKEELLTTQEELQKMWILRKIIHPMGEID R K E Q K M 0 0 0 0 0 2 4 0 0 0 3 2 0 0 0 0 2 0 0 0 0 0 13 1 4 0 1587.8356 P0AG30 P0AG30 367 379 rho Transcription termination factor Rho yes yes 3 1.157E-07 82.069 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26274000 6643200 9305600 0 0 4377900 5947300 0 0 2321 256 2509 13565;13566;13567;13568 10338;10339;10340;10341 10340 4 6643200 9525300 0 0 5281100 6588300 0 0 KEGYVNLLPVQHKRSRDP KNSYICPQRHQFDMAKEGYVNLLPVQHKRS YVNLLPVQHKRSRDPGDSAEMMQARRAFLD A K E D P G 0 2 1 1 0 1 1 1 1 0 2 2 0 0 2 1 0 0 1 2 0 0 18 4 1 1 2135.16 P36999 P36999 31 48 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 4 0.02372 14.041 By matching By MS/MS 1 1 3562200 0 0 0 0 1813300 1748900 0 0 2322 352 2510 13569;13570 10342 10342 1 0 0 0 0 2581600 2493100 0 0 KEKDEMVEQEFNRLLEA KQKCPLYEANGQAVPKEKDEMVEQEFNRLL KDEMVEQEFNRLLEATSYLSHQLDFNVLNN P K E E A T 1 1 1 1 0 1 5 0 0 0 2 2 1 1 0 0 0 0 0 1 0 0 17 3 5 0 2107.0256 LSD1-FL-His LSD1-FL-His 374 390 yes yes 3;4 6.617E-20 95.428 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 4 315640000 19180000 11898000 0 0 123480000 161080000 0 0 2323 24 2511;2512 13571;13572;13573;13574;13575;13576;13577;13578;13579;13580;13581;13582;13583 10343;10344;10345;10346;10347;10348;10349 10347 42 7 115780000 71211000 0 0 175790000 229620000 0 0 KEKKLPPPPPQAPPEE EDEYYSEEERNAKAEKEKKLPPPPPQAPPE EKKLPPPPPQAPPEEENESEPEEPSGVEGA E K E E E E 1 0 0 0 0 1 3 0 0 0 1 3 0 0 7 0 0 0 0 0 0 0 16 3 2 8 1780.9723 LSD1-FL-His LSD1-FL-His 149 164 yes yes 3 0.01812 29.013 By MS/MS By MS/MS By matching By matching 1 1 1 1 18815000 2492800 4550300 0 0 0 0 8031300 3740300 2324 24 2513 13584;13585;13586;13587 10350 10350 1 38301000 69393000 0 0 0 0 61811000 21465000 KEMVEANLR NRRMSIGEAKARRAKKEMVEANLRLVISIA KARRAKKEMVEANLRLVISIAKKYTNRGLQ K K E L R L 1 1 1 0 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 9 1 2 1 1088.5648 P00579 P00579 377 385 rpoD RNA polymerase sigma factor RpoD yes yes 3 0.0013376 46.819 By matching By matching By matching By MS/MS 1 1 1 1 19227000 5942600 6557100 0 0 3814700 2912900 0 0 2325 27 2514 13588;13589;13590;13591 10351 10351 1 5942600 6711900 0 0 4601700 3226900 0 0 KENLPISGHK LMVFKLAQAYYESTRKENLPISGHKHRKHS YESTRKENLPISGHKHRKHSHHDKHEDNKQ R K E H K H 0 0 1 0 0 0 1 1 1 1 1 2 0 0 1 1 0 0 0 0 0 0 10 1 1 1 1121.6193 CON__P20930 CON__P20930 91 100 yes yes 3 0.014306 21.396 By MS/MS By MS/MS 1 1 3417400 0 0 0 0 1524800 1892600 0 0 + 2326 14 2515 13592;13593 10352;10353 10352 2 0 0 0 0 1839400 2096500 0 0 KEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR AEVGPGAVGERTPRKKEPPRASPPGGLAEP ATPMETGIAETPEGRRTSRRKRAKVEYREM K K E G R R 6 2 0 0 0 1 5 8 0 1 1 1 1 0 11 3 4 0 0 2 0 0 46 2 5 17 4402.1863 LSD1-FL-His LSD1-FL-His 65 110 yes yes 4 1.9479E-36 79.769 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 127950000 32413000 39550000 0 0 29919000 26064000 0 0 2327 24 2516 13594;13595;13596;13597 10354;10355;10356;10357 10355 4 32413000 40484000 0 0 36092000 28873000 0 0 KERIARKVAE VNTPWHDRKATQTEEKERIARKVAEQIPNG TQTEEKERIARKVAEQIPNGSTLFIDIGTT E K E A E Q 2 2 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 10 4 1 2 1198.7146 P0ACL0 P0ACL0 78 87 glpR Glycerol-3-phosphate regulon repressor yes yes 3;4 0.0041107 48.284 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 2 2 65451000 3279000 2604500 7419900 10095000 1711800 0 20573000 19767000 2328 215 2517 13598;13599;13600;13601;13602;13603;13604;13605;13606;13607;13608 10358;10359;10360 10360 2 50381000 39719000 63046000 76539000 26355000 0 158330000 113440000 KETVVSRWRADP AILKGIFGSSAVPQPKETVVSRWRADPWAR PQPKETVVSRWRADPWARGSYSYVAAGSSG P K E D P W 1 2 0 1 0 0 1 0 0 0 0 1 0 0 1 1 1 1 0 2 0 0 12 3 1 1 1442.763 LSD1-FL-His LSD1-FL-His 746 757 yes yes 3 0.0055361 55.452 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 242880000 31523000 21532000 0 0 84396000 105430000 0 0 2329 24 2518 13609;13610;13611;13612 10361 10361 1 190290000 128870000 0 0 120150000 150290000 0 0 KEVTLAYGGMR DDRVTEFGAMVIKAAKEVTLAYGGMR____ IKAAKEVTLAYGGMR_______________ A K E M R - 1 1 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 1 1 0 0 11 1 1 1 1223.6332 P16528 P16528 264 274 iclR Acetate operon repressor yes yes 3 0.00026549 52.903 By MS/MS 1 0 0 0 0 0 0 0 0 0 2330 285 2519 13613 10362 10362 233 1 0 0 0 0 0 0 0 0 KFEELVQTR QKMVRDAEANAEADRKFEELVQTRNQGDHL NAEADRKFEELVQTRNQGDHLLHSTRKQVE R K F T R N 0 1 0 0 0 1 2 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 9 1 2 0 1148.619 P0A6Y8 P0A6Y8 528 536 dnaK Chaperone protein DnaK yes yes 2;3 2.2067E-60 196.99 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 943760000 212360000 230320000 0 0 260790000 240290000 0 0 2331 86 2520 13614;13615;13616;13617;13618;13619;13620;13621 10363;10364;10365;10366;10367;10368;10369;10370 10369 8 212360000 235750000 0 0 314590000 266190000 0 0 KFFDDLTR EHNSPRSKSFFDGVKKFFDDLTR_______ SFFDGVKKFFDDLTR_______________ K K F T R - 0 1 0 2 0 0 0 0 0 0 1 1 0 2 0 0 1 0 0 0 0 0 8 1 0 0 1040.5291 P08622 P08622 369 376 dnaJ Chaperone protein DnaJ yes yes 2 0.0024212 83.998 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 67850000 20828000 17175000 0 0 12528000 17319000 0 0 2332 61 2521 13622;13623;13624;13625 10371;10372 10371 2 20828000 17581000 0 0 15112000 19185000 0 0 KFFSDIGGRA RLSSVSHPEYIGRVAKFFSDIGGRALLMHG IGRVAKFFSDIGGRALLMHGTEGEVYANPQ A K F R A L 1 1 0 1 0 0 0 2 0 1 0 1 0 2 0 1 0 0 0 0 0 0 10 2 0 0 1096.5665 P30177 P30177 213 222 ybiB Uncharacterized protein YbiB yes yes 2 0.0032802 76.827 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17420000 579790 742340 0 0 10846000 5252000 0 0 2333 332 2522 13626;13627;13628;13629 10373 10373 1 3499900 4442900 0 0 15441000 7486600 0 0 KFGFTSRKA RGFEGGQMPLYRRLPKFGFTSRKAAITAEI LYRRLPKFGFTSRKAAITAEIRLSDLAKVE P K F K A A 1 1 0 0 0 0 0 1 0 0 0 2 0 2 0 1 1 0 0 0 0 0 9 3 0 0 1040.5767 P02413 P02413 63 71 rplO 50S ribosomal protein L15 yes yes 2 0.011793 71.379 By MS/MS By MS/MS By MS/MS 1 1 1 14649000 1144700 1307900 0 0 0 12197000 0 0 2334 37 2523 13630;13631;13632 10374 10374 1 6910000 7827600 0 0 0 17387000 0 0 KFGFTSRKAA RGFEGGQMPLYRRLPKFGFTSRKAAITAEI YRRLPKFGFTSRKAAITAEIRLSDLAKVEG P K F A A I 2 1 0 0 0 0 0 1 0 0 0 2 0 2 0 1 1 0 0 0 0 0 10 3 0 1 1111.6138 P02413 P02413 63 72 rplO 50S ribosomal protein L15 yes yes 2;3 3.2293E-06 101.82 By MS/MS By MS/MS By MS/MS 2 1 2 345550000 39398000 31451000 0 0 0 274700000 0 0 2335 37 2524 13633;13634;13635;13636;13637 10375;10376;10377;10378;10379 10378 4 237830000 188240000 0 0 0 391580000 0 0 KFMKIISLAPE GTRIFGPVTRELRSEKFMKIISLAPEVL__ LRSEKFMKIISLAPEVL_____________ E K F P E V 1 0 0 0 0 0 1 0 0 2 1 2 1 1 1 1 0 0 0 0 0 0 11 2 0 2 1275.7261 P0ADY3 P0ADY3 111 121 rplN 50S ribosomal protein L14 yes yes 3 0.023057 32.329 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 262820000 10807000 16358000 56490000 65441000 16549000 16228000 21386000 59559000 2336 228 2525 13638;13639;13640;13641;13642;13643;13644;13645 10380 10380 1 166050000 249460000 479990000 496150000 254780000 245970000 164590000 341800000 KFMKIISLAPEVL GTRIFGPVTRELRSEKFMKIISLAPEVL__ SEKFMKIISLAPEVL_______________ E K F V L - 1 0 0 0 0 0 1 0 0 2 2 2 1 1 1 1 0 0 0 1 0 0 13 2 1 2 1487.8786 P0ADY3 P0ADY3 111 123 rplN 50S ribosomal protein L14 yes yes 2;3 6.6227E-09 79.974 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 3 2 3 4 2 3 194750000 8647000 9352600 7723000 11155000 48895000 84113000 6815100 18051000 2337 228 2526;2527 13646;13647;13648;13649;13650;13651;13652;13653;13654;13655;13656;13657;13658;13659;13660;13661;13662;13663;13664;13665;13666;13667;13668;13669 10381;10382;10383;10384;10385;10386;10387;10388 10387 205 8 132860000 142630000 65621000 84573000 752780000 1274900000 52450000 103590000 KFNLMLETK ADKDIVKVFTKRISKKFNLMLETKVTAVEA TKRISKKFNLMLETKVTAVEAKEDGIYVTM K K F T K V 0 0 1 0 0 0 1 0 0 0 2 2 1 1 0 0 1 0 0 0 0 0 9 1 1 0 1122.6107 P0A9P0 P0A9P0 229 237 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.0063319 64.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19636000 6322200 4792300 0 0 3260000 5261900 0 0 2338 172 2528 13670;13671;13672;13673 10389 10389 1 6322200 4905400 0 0 3932500 5829100 0 0 KFQSEEQQQTE SSSEESITRINKKIEKFQSEEQQQTEDELQ KKIEKFQSEEQQQTEDELQDKIHPFAQTQS E K F T E D 0 0 0 0 0 4 3 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 11 1 2 0 1380.6157 CON__P02666 CON__P02666 32 42 yes yes 2 3.336E-49 160.15 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 0 0 0 0 0 0 0 0 0 + 2339 8 2529 13674;13675;13676;13677;13678;13679 10390;10391;10392;10393 10393 2 0 0 0 0 0 0 0 0 0 KGALEQQLAEVHR PGVPISRIDRDTTSRKGALEQQLAEVHRGG SRKGALEQQLAEVHRGGARILIGTQMLAKG R K G H R G 2 1 0 0 0 2 2 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 13 1 2 2 1477.8001 P17888 P17888 518 530 priA Primosomal protein N yes yes 3 6.8127E-11 111.96 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 69597000 20613000 18231000 0 0 15238000 15515000 0 0 2340 290 2530 13680;13681;13682;13683 10394;10395;10396;10397 10394 4 20613000 18661000 0 0 18382000 17187000 0 0 KGDIGAFDSPK KTFHRGSTDYFVNARKGDIGAFDSPKFIGL VNARKGDIGAFDSPKFIGLPVGEVVKVAKD R K G P K F 1 0 0 2 0 0 0 2 0 1 0 2 0 1 1 1 0 0 0 0 0 0 11 1 0 2 1133.5717 P76104 P76104 305 315 ydcP Uncharacterized protease YdcP yes yes 2;3 1.8188E-05 120.86 By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 2 2 2 1 49965000 12773000 9623400 0 0 10033000 7287800 10249000 0 2341 416 2531 13684;13685;13686;13687;13688;13689;13690;13691;13692;13693 10398;10399;10400;10401;10402;10403;10404 10398 7 24047000 9850500 0 0 12102000 8073200 78881000 0 KGDLVFR EVLCALARTLESCARKGDLVFRWGGEEFVL RTLESCARKGDLVFRWGGEEFVLLLPRTPL R K G F R W 0 1 0 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 7 1 0 0 833.47594 P77302 P77302 324 330 ydaM Probable diguanylate cyclase YdaM yes yes 2 1.9853E-07 124.34 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 60280000 21451000 16184000 0 0 14055000 8590200 0 0 2342 429 2532 13694;13695;13696;13697;13698;13699;13700 10405;10406;10407;10408 10405 4 49202000 36923000 0 0 17780000 9516000 0 0 KGEDVVVPGLFAVGE GIPTKVTGQALTVNEKGEDVVVPGLFAVGE KGEDVVVPGLFAVGEIACVSVHGANRLGGN E K G G E I 1 0 0 1 0 0 2 3 0 0 1 1 0 1 1 0 0 0 0 4 0 0 15 1 1 2 1514.7981 P0AC41 P0AC41 374 388 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 2.9795E-17 109.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 108120000 9168900 11889000 13999000 7650300 16648000 21401000 9434400 17930000 2343 203 2533 13701;13702;13703;13704;13705;13706;13707;13708 10409;10410;10411;10412;10413 10412 5 140880000 181310000 118950000 58001000 256310000 324360000 72609000 102900000 KGEETPTLSYMLPK NDQMETPHYHVLRVRKGEETPTLSYMLPKL RKGEETPTLSYMLPKLHEEAMALPSEEEFA R K G P K L 0 0 0 0 0 0 2 1 0 0 2 2 1 0 2 1 2 0 1 0 0 0 14 1 2 2 1592.812 P21513 P21513 491 504 rne Ribonuclease E yes yes 3 0.0014904 47.037 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 21914000 2518000 6979300 0 0 6757900 5658700 0 0 2344 297 2534 13709;13710;13711;13712;13713 10414;10415;10416;10417;10418 10416 5 2518000 7144000 0 0 8152100 6268600 0 0 KGEMNFDVVIASPDAMR GAELVGMEDLADQIKKGEMNFDVVIASPDA EMNFDVVIASPDAMRVVGQLGQVLGPRGLM K K G M R V 2 1 1 2 0 0 1 1 0 1 0 1 2 1 1 1 0 0 0 2 0 0 17 1 1 3 1878.8968 P0A7L0 P0A7L0 106 122 rplA 50S ribosomal protein L1 yes yes 3 0.00055957 40.962 By matching By matching By MS/MS By MS/MS 1 1 1 1 8989000 1563200 2349700 0 0 0 5076100 0 0 2345 110 2535 13714;13715;13716;13717 10419;10420 10419 2 1563200 2405200 0 0 0 5623200 0 0 KGEMVLIVEGHK VGELLAWVKEDENRRKGEMVLIVEGHKAQE NRRKGEMVLIVEGHKAQEEDLPADALRTLA R K G H K A 0 0 0 0 0 0 2 2 1 1 1 2 1 0 0 0 0 0 0 2 0 0 12 1 2 0 1338.733 P67087 P67087 225 236 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 3 0.0029659 42.317 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46662000 12836000 12345000 0 0 9609200 11873000 0 0 2346 400 2536 13718;13719;13720;13721 10421;10422 10422 2 12836000 12636000 0 0 11592000 13152000 0 0 KGGLHTVVDSTTLSR MLNGCTWLPVSWARKKGGLHTVVDSTTLSR KGGLHTVVDSTTLSRPLYAIWLQNSDKNAL K K G S R P 0 1 0 1 0 0 0 2 1 0 2 1 0 0 0 2 3 0 0 2 0 0 15 1 0 0 1569.8475 P0A8R9 P0A8R9 236 250 hdfR HTH-type transcriptional regulator HdfR yes yes 3 4.9815E-05 66.335 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70162000 17133000 19016000 0 0 12055000 21957000 0 0 2347 152 2537 13722;13723;13724;13725 10423;10424;10425;10426 10424 4 17133000 19465000 0 0 14541000 24324000 0 0 KGIKDVSFDRSGFQYHGRVQALADAARE AAAAVGKAVAERALEKGIKDVSFDRSGFQY QYHGRVQALADAAREAGLQF__________ E K G R E A 4 3 0 3 0 2 1 3 1 1 1 2 0 2 0 2 0 0 1 2 0 0 28 5 0 4 3120.5853 P0C018 P0C018 85 112 rplR 50S ribosomal protein L18 yes yes 4;5;6 0.0001777 53.55 By MS/MS By MS/MS 3 3 63074000 0 0 0 0 30439000 32635000 0 0 2348 266 2538 13726;13727;13728;13729;13730;13731 10427;10428;10429;10430;10431;10432 10429 6 0 0 0 0 468630000 494640000 0 0 KGISHFITE PGDEPIDICQVKKGEKGISHFITEHIAPFY QVKKGEKGISHFITEHIAPFYERRWGGFLR E K G T E H 0 0 0 0 0 0 1 1 1 2 0 1 0 1 0 1 1 0 0 0 0 0 9 1 0 0 1030.5447 P0AFZ1 P0AFZ1 227 235 sseB Protein SseB yes yes 2 0.023679 53.166 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33219000 0 0 7006300 6510200 0 0 8299800 11403000 2349 253 2539 13732;13733;13734;13735 10433 10433 1 0 0 59531000 49357000 0 0 63877000 65438000 KGIVMFEK VVVTTPQDIALIDAKKGIVMFEKVEVPVLG IALIDAKKGIVMFEKVEVPVLGIVENMSVH K K G E K V 0 0 0 0 0 0 1 1 0 1 0 2 1 1 0 0 0 0 0 1 0 0 8 1 1 0 950.52592 P0AF08 P0AF08 259 266 mrp Protein mrp yes yes 2 0.0030402 72.879 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 17686000 5647200 5832400 0 0 2678200 3528500 0 0 2350 241 2540 13736;13737;13738;13739 10434;10435;10436 10434 3 5647200 5970100 0 0 3230700 3908700 0 0 KGLAALSLPEHQR ELPASAAHSHQHVVKKGLAALSLPEHQRWR VKKGLAALSLPEHQRWRRSLNSGQGYQACG K K G Q R W 2 1 0 0 0 1 1 1 1 0 3 1 0 0 1 1 0 0 0 0 0 0 13 1 1 3 1418.7994 P33030 P33030 215 227 yeiR Uncharacterized protein YeiR yes yes 3 4.6614E-20 127.02 By MS/MS By MS/MS 1 1 71320000 29986000 41333000 0 0 0 0 0 0 2351 343 2541 13740;13741 10437;10438 10437 2 29986000 42309000 0 0 0 0 0 0 KGLADTALK GLNVLQYFISTHGARKGLADTALKTANSGY STHGARKGLADTALKTANSGYLTRRLVDVA R K G L K T 2 0 0 1 0 0 0 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 9 1 0 2 915.53893 P0A8T7 P0A8T7 781 789 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 8.1365E-05 105.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32098000 9947300 10115000 0 0 6346300 5690300 0 0 2352 153 2542 13742;13743;13744;13745 10439;10440;10441;10442 10440 4 9947300 10353000 0 0 7655600 6303600 0 0 KGLHAYTHATLVSPVHLK LAQLSEEQVTKLLHRKGLHAYTHATLVSPV HAYTHATLVSPVHLKEDLAQTRKRGYSFDD R K G L K E 2 0 0 0 0 0 0 1 3 0 3 2 0 0 1 1 2 0 1 2 0 0 18 1 0 3 1971.1054 P16528 P16528 181 198 iclR Acetate operon repressor yes yes 4;5 0.00029973 47.754 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 119920000 35701000 25961000 0 0 23935000 34320000 0 0 2353 285 2543 13746;13747;13748;13749;13750;13751;13752;13753 10443;10444;10445;10446;10447;10448;10449;10450 10448 8 35701000 26574000 0 0 28872000 38019000 0 0 KGLKAGDQIQSGVDA LVLYKDGERRYILAPKGLKAGDQIQSGVDA KGLKAGDQIQSGVDAAIKPGNTLPMRNIPV P K G D A A 2 0 0 2 0 2 0 3 0 1 1 2 0 0 0 1 0 0 0 1 0 0 15 2 0 1 1485.7787 P60422 P60422 108 122 rplB 50S ribosomal protein L2 yes yes 2;3 3.2465E-11 87.001 By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 1 2 88889000 17622000 14417000 3078400 0 5358100 48413000 0 0 2354 379 2544 13754;13755;13756;13757;13758;13759;13760;13761 10451;10452;10453 10453 3 106380000 86285000 26157000 0 7628200 69013000 0 0 KGMASGAVIESFLDK AILLQAEVLELKAVRKGMASGAVIESFLDK KGMASGAVIESFLDKGRGPVATVLVREGTL R K G D K G 2 0 0 1 0 0 1 2 0 1 1 2 1 1 0 2 0 0 0 1 0 0 15 1 1 2 1551.7967 P0A705;P0A705-3;P0A705-2 P0A705 562 576 infB Translation initiation factor IF-2 yes no 3 0.0011567 44.252 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19737000 6316100 5180800 0 0 4174400 4066100 0 0 2355 90 2545 13762;13763;13764;13765 10454;10455;10456;10457 10454 4 6316100 5303100 0 0 5035500 4504300 0 0 KGNYVADLGAMVVTGLGGNPMAVVSK LEARDRVGGRVATFRKGNYVADLGAMVVTG VVTGLGGNPMAVVSKQVNMELAKIKQKCPL R K G S K Q 3 0 2 1 0 0 0 5 0 0 2 2 2 0 1 1 1 0 1 5 0 0 26 1 0 4 2547.3189 LSD1-FL-His LSD1-FL-His 324 349 yes yes 3 4.823E-84 156.43 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 5 3 8739600000 1668700000 989700000 0 0 2888200000 3193000000 0 0 2356 24 2546;2547;2548 13766;13767;13768;13769;13770;13771;13772;13773;13774;13775;13776;13777;13778;13779;13780 10458;10459;10460;10461;10462;10463;10464;10465;10466;10467;10468;10469 10464 45;46 12 1678700000 1013100000 0 0 3605500000 3537200000 0 0 KGPFIDLHLLK ______________________________ RSLKKGPFIDLHLLKKVEKAVESGDKKPLR K K G L K K 0 0 0 1 0 0 0 1 1 1 3 2 0 1 1 0 0 0 0 0 0 0 11 1 0 1 1279.7652 P0A7U3 P0A7U3 7 17 rpsS 30S ribosomal protein S19 yes yes 2;3 2.1442E-07 104.82 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 258150000 56080000 56905000 0 0 62212000 82953000 0 0 2357 126 2549 13781;13782;13783;13784;13785;13786;13787;13788 10470;10471;10472;10473;10474;10475;10476;10477 10475 8 56080000 58248000 0 0 75046000 91893000 0 0 KGRNVVLDKSFGAP GVNVLADAVKVTLGPKGRNVVLDKSFGAPT PKGRNVVLDKSFGAPTITKDGVSVAREIEL P K G A P T 1 1 1 1 0 0 0 2 0 0 1 2 0 1 1 1 0 0 0 2 0 0 14 3 0 1 1486.8256 P0A6F5 P0A6F5 34 47 groL 60 kDa chaperonin yes yes 3 0.00076196 60.301 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20249000 1060900 1059900 0 0 12678000 5450700 0 0 2358 68 2550 13789;13790;13791;13792 10478;10479 10479 2 6404300 6343600 0 0 18049000 7770000 0 0 KGSENYALTTNQGVR PDTRNEKLNSLEDVRKGSENYALTTNQGVR KGSENYALTTNQGVRIADDQNSLRAGSRGP R K G V R I 1 1 2 0 0 1 1 2 0 0 1 1 0 0 0 1 2 0 1 1 0 0 15 1 1 1 1636.8169 P21179 P21179 73 87 katE Catalase HPII yes yes 2;3 1.9231E-31 118.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 154110000 33291000 47918000 0 0 35956000 36947000 0 0 2359 293 2551 13793;13794;13795;13796;13797;13798;13799;13800 10480;10481;10482;10483;10484;10485;10486;10487 10482 8 33291000 49049000 0 0 43374000 40929000 0 0 KGSSLQQGFQKPAQAVNR EEARAAVRGGKGGKRKGSSLQQGFQKPAQA SLQQGFQKPAQAVNRDVVIGETITVGELAN R K G N R D 2 1 1 0 0 4 0 2 0 0 1 2 0 1 1 2 0 0 0 1 0 0 18 2 0 3 1943.0337 P0A705;P0A705-3;P0A705-2 P0A705 291 308 infB Translation initiation factor IF-2 yes no 4 0.014083 21.445 By matching By MS/MS 1 1 8639600 0 0 0 0 4139400 4500200 0 0 2360 90 2552 13801;13802 10488 10488 1 0 0 0 0 4993300 4985200 0 0 KGVQLHNEKDLTKP TLESPVADDTAEQFAKGVQLHNEKDLTKPA AKGVQLHNEKDLTKPAVLEVITPTQVRLTI A K G K P A 0 0 1 1 0 1 1 1 1 0 2 3 0 0 1 0 1 0 0 1 0 0 14 3 1 0 1605.8839 P0AA43 P0AA43 150 163 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3;4 0.00077829 42.809 By MS/MS By MS/MS By MS/MS 2 2 2 73838000 14598000 16297000 0 0 0 42943000 0 0 2361 183 2553 13803;13804;13805;13806;13807;13808 10489;10490 10490 1 88120000 97540000 0 0 0 61215000 0 0 KHKVAVLSVTE NVGNLVCPASFDLGEKHKVAVLSVTEGEDK DLGEKHKVAVLSVTEGEDKPLKYPHMFAAA E K H T E G 1 0 0 0 0 0 1 0 1 0 1 2 0 0 0 1 1 0 0 3 0 0 11 2 0 1 1209.7081 P0AAN3 P0AAN3 207 217 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 0.0077656 33.229 By MS/MS 1 0 0 0 0 0 0 0 0 0 2362 187 2554 13809 10491 10491 1 0 0 0 0 0 0 0 0 KHLAKAPAKE KGTGVGGRLTREDVEKHLAKAPAKESAPAA REDVEKHLAKAPAKESAPAAAAPAAQPALA E K H K E S 3 0 0 0 0 0 1 0 1 0 1 3 0 0 1 0 0 0 0 0 0 0 10 3 0 4 1091.6451 P0AFG6 P0AFG6 148 157 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 4 0.021619 16.533 By MS/MS By MS/MS By matching 1 1 1 37052000 0 0 2331200 0 0 0 32667000 2053900 2363 247 2555 13810;13811;13812 10492 10492 1 0 0 19807000 0 0 0 251410000 11787000 KHPLRHHFPPFAGFRVVE ASIEELGEMLLASFEKHPLRHHFPPFAGFR LRHHFPPFAGFRVVESSSYYGKGYQDVEHR E K H V E S 1 2 0 0 0 0 1 1 3 0 1 1 0 3 3 0 0 0 0 2 0 0 18 3 0 4 2170.1701 P77398 P77398 587 604 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 4;5 0.00023368 48.314 By matching By MS/MS By MS/MS By matching By MS/MS 1 2 3 1 1 25350000 0 296620 0 0 2748100 16649000 1059200 4596700 2364 432 2556 13813;13814;13815;13816;13817;13818;13819;13820 10493;10494;10495;10496;10497 10493 4 0 1775300 0 0 31267000 235840000 8152100 26380000 KHPQQEFLQVDTSK LIEGTVAAVPPQGGRKHPQQEFLQVDTSKI RKHPQQEFLQVDTSKILFICGGAFAGLDKV R K H S K I 0 0 0 1 0 3 1 0 1 0 1 2 0 1 1 1 1 0 0 1 0 0 14 1 1 1 1683.858 P0A6H1 P0A6H1 229 242 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 3 9.5734E-05 65.472 By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 48336000 11970000 13660000 0 0 8416300 14289000 0 0 2365 70 2557 13821;13822;13823;13824;13825 10498;10499 10498 2 11970000 13983000 0 0 10153000 67221000 0 0 KHQKPVPALNQPGGIVEK LSSGKVIVEGINLVKKHQKPVPALNQPGGI KPVPALNQPGGIVEKEAAIQVSNVAIFNAA K K H E K E 1 0 1 0 0 2 1 2 1 1 1 3 0 0 3 0 0 0 0 2 0 0 18 2 1 4 1939.1003 P60624 P60624 44 61 rplX 50S ribosomal protein L24 yes yes 3;4 4.0464E-90 174.87 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 204090000 54176000 38175000 0 0 56566000 55176000 0 0 2366 381 2558 13826;13827;13828;13829;13830;13831;13832;13833 10500;10501;10502;10503;10504;10505;10506;10507 10503 8 54176000 39076000 0 0 68235000 61123000 0 0 KHVKDEQIE VSLGQALEVVIQLQEKHVKDEQIEHWKKIV VIQLQEKHVKDEQIEHWKKIVKTQEELKEL E K H I E H 0 0 0 1 0 1 2 0 1 1 0 2 0 0 0 0 0 0 0 1 0 0 9 2 1 0 1124.5826 LSD1-FL-His LSD1-FL-His 423 431 yes yes 2;3 2.454E-12 130.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 17 19 3 2 25 24 2 2 28222000000 291530000 197210000 6767300000 5311100000 277910000 462340000 5708300000 9206200000 2367 24 2559 13834;13835;13836;13837;13838;13839;13840;13841;13842;13843;13844;13845;13846;13847;13848;13849;13850;13851;13852;13853;13854;13855;13856;13857;13858;13859;13860;13861;13862;13863;13864;13865;13866;13867;13868;13869;13870;13871;13872;13873;13874;13875;13876;13877;13878;13879;13880;13881;13882;13883;13884;13885;13886;13887;13888;13889;13890;13891;13892;13893;13894;13895;13896;13897;13898;13899;13900;13901;13902;13903;13904;13905;13906;13907;13908;13909;13910;13911;13912;13913;13914;13915;13916;13917;13918;13919;13920;13921;13922;13923;13924;13925;13926;13927 10508;10509;10510;10511;10512;10513;10514;10515;10516;10517;10518;10519;10520;10521;10522;10523;10524;10525;10526;10527;10528;10529;10530;10531;10532;10533;10534;10535;10536;10537;10538;10539;10540;10541;10542;10543;10544;10545;10546;10547;10548;10549;10550;10551;10552;10553;10554;10555;10556;10557;10558;10559;10560;10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572;10573;10574;10575;10576;10577;10578;10579;10580;10581;10582;10583;10584;10585;10586;10587;10588;10589;10590;10591;10592;10593;10594 10565 85 4475800000 3003700000 57501000000 40266000000 4278600000 7002100000 43933000000 52833000000 KIDKIPA LLTLMAAHRVWSRIPKIDKIPA________ HRVWSRIPKIDKIPA_______________ P K I P A - 1 0 0 1 0 0 0 0 0 2 0 2 0 0 1 0 0 0 0 0 0 0 7 2 0 1 783.48544 P21179 P21179 747 753 katE Catalase HPII yes yes 2 0.008017 62.978 By MS/MS By MS/MS By matching 1 1 1 35280000 7322300 6012100 0 0 0 21946000 0 0 2368 293 2560 13928;13929;13930 10595 10595 1 44201000 35983000 0 0 0 31283000 0 0 KIEFVEIYEPFSEGQAK DLQRVDPPKKPLKIRKIEFVEIYEPFSEGQ EFVEIYEPFSEGQAKAQADRCLSCGNPYCE R K I A K A 1 0 0 0 0 1 4 1 0 2 0 2 0 2 1 1 0 0 1 1 0 0 17 1 4 2 2013.0095 P09832 P09832 25 41 gltD Glutamate synthase [NADPH] small chain yes yes 3 0.0012251 40.085 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 14560000 3957200 4224100 0 0 2598300 3780800 0 0 2369 65 2561 13931;13932;13933;13934 10596;10597;10598 10596 3 3957200 4323800 0 0 3134400 4188300 0 0 KIIAVIDR DLRVNQSDISDAQIKKIIAVIDRAAFDITQ ISDAQIKKIIAVIDRAAFDITQLD______ K K I D R A 1 1 0 1 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 1 0 0 8 1 0 1 926.5913 P64588 P64588 191 198 yqjI Transcriptional regulator YqjI yes yes 2 1.0696E-11 130.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 155440000 39174000 41780000 0 0 32468000 42018000 0 0 2370 398 2562 13935;13936;13937;13938 10599;10600;10601;10602 10602 4 39174000 42766000 0 0 39166000 46546000 0 0 KILPDPK ______________________________ RRRVIGQRKILPDPKFGSELLAKFVNILMV R K I P K F 0 0 0 1 0 0 0 0 0 1 1 2 0 0 2 0 0 0 0 0 0 0 7 1 0 2 809.50109 P02359 P02359 11 17 rpsG 30S ribosomal protein S7 yes yes 2 0.0028737 77.741 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 25775000 5919200 8583500 0 0 6119400 5153300 0 0 2371 36 2563 13939;13940;13941;13942 10603;10604 10603 2 5919200 8786100 0 0 7381800 5708700 0 0 KIQLTFEA LFIRNRTLQLWLDNPKIQLTFEATLQQLEA QLWLDNPKIQLTFEATLQQLEAPYNSDTVL P K I E A T 1 0 0 0 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 8 1 1 0 948.52803 LSD1-FL-His LSD1-FL-His 228 235 yes yes 2 0.0069187 72.138 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 1 1 1 1 232980000 26381000 31341000 0 0 0 173110000 927840 1224300 2372 24 2564 13943;13944;13945;13946;13947;13948;13949;13950 10605;10606 10606 2 198020000 224150000 0 0 0 246760000 7140900 7026000 KISALDE ______________________________ NPLLALREKISALDEKLLALLAERRELAVE E K I D E K 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 7 1 0 1 774.41233 P0A9J8 P0A9J8 13 19 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.00035435 105.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 133800000 39575000 49121000 0 0 24767000 20337000 0 0 2373 166 2565 13951;13952;13953;13954;13955 10607;10608;10609 10608 3 608070000 749090000 0 0 357600000 308240000 0 0 KISEVPVKR RKIKQDTIVHRPQRKKISEVPVKRLIQEQA HRPQRKKISEVPVKRLIQEQADASHYFSDE K K I K R L 0 1 0 0 0 0 1 0 0 1 0 2 0 0 1 1 0 0 0 2 0 0 9 2 1 1 1054.6499 P0A8B2 P0A8B2 38 46 yfcN UPF0115 protein YfcN yes yes 3 0.0090014 44.882 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22939000 7734000 9224800 0 0 3294000 2685900 0 0 2374 142 2566 13956;13957;13958;13959 10610;10611 10611 2 7734000 9442500 0 0 3973500 2975400 0 0 KISNGEGVER IAIRNRGLHSAFTVRKISNGEGVERVFQTH AFTVRKISNGEGVERVFQTHSPVVDSISVK R K I E R V 0 1 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 0 1 0 0 10 1 2 0 1087.5622 P0A7K6 P0A7K6 63 72 rplS 50S ribosomal protein L19 yes yes 3 0.0039364 25.437 By MS/MS 1 0 0 0 0 0 0 0 0 0 2375 109 2567 13960 10612 10612 1 0 0 0 0 0 0 0 0 KITHFDHE GSRGPTLLEDFILREKITHFDHERIPERIV EDFILREKITHFDHERIPERIVHARGSAAH E K I H E R 0 0 0 1 0 0 1 0 2 1 0 1 0 1 0 0 1 0 0 0 0 0 8 1 0 0 1025.493 P21179 P21179 113 120 katE Catalase HPII yes yes 2;3 0.00381 96.253 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 2 48309000 1806800 2299000 6808500 9150600 949740 886430 9304600 17103000 2376 293 2568 13961;13962;13963;13964;13965;13966;13967;13968;13969;13970 10613;10614;10615;10616 10615 4 27762000 35060000 57851000 69376000 14622000 13435000 71610000 98154000 KITHFDHERIPE GSRGPTLLEDFILREKITHFDHERIPERIV LREKITHFDHERIPERIVHARGSAAHGYFQ E K I P E R 0 1 0 1 0 0 2 0 2 2 0 1 0 1 1 0 1 0 0 0 0 0 12 2 1 1 1520.7736 P21179 P21179 113 124 katE Catalase HPII yes yes 3 2.9065E-06 72.265 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 1 1 1 1 1 151480000 14369000 15517000 2696000 34866000 17707000 10346000 21719000 34263000 2377 293 2569 13971;13972;13973;13974;13975;13976;13977;13978;13979;13980 10617;10618;10619;10620;10621;10622;10623;10624;10625;10626;10627 10627 10 220780000 236640000 22907000 264340000 272610000 156810000 167150000 196630000 KIYADKLEQEK QPLMYQKIKKHPTPRKIYADKLEQEKVATL PTPRKIYADKLEQEKVATLEDATEMVNLYR R K I E K V 1 0 0 1 0 1 2 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 11 2 2 1 1363.7347 P0AFG3 P0AFG3 485 495 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 2.1488E-79 166.69 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 279330000 74099000 90369000 0 0 52524000 62341000 0 0 2378 246 2570 13981;13982;13983;13984;13985;13986;13987;13988 10628;10629;10630;10631;10632;10633;10634;10635 10632 8 74099000 92502000 0 0 63360000 69060000 0 0 KKARVEDALHATRAAVEE AVIKVGAATEVEMKEKKARVEDALHATRAA RVEDALHATRAAVEEGVVAGGGVALIRVAS E K K E E G 5 2 0 1 0 0 3 0 1 0 1 2 0 0 0 0 1 0 0 2 0 0 18 4 2 5 1993.0705 P0A6F5 P0A6F5 392 409 groL 60 kDa chaperonin yes yes 3;4 2.4223E-26 105.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 2 2 1 2 232750000 19751000 29896000 5358600 11057000 76313000 65333000 4897200 20147000 2379 68 2571 13989;13990;13991;13992;13993;13994;13995;13996;13997;13998;13999;14000;14001;14002 10636;10637;10638;10639;10640;10641;10642;10643;10644;10645;10646;10647 10638 12 303470000 455920000 45531000 83830000 1174900000 990220000 37690000 115620000 KKGGLHTVVDSTTLSR AMLNGCTWLPVSWARKKGGLHTVVDSTTLS KGGLHTVVDSTTLSRPLYAIWLQNSDKNAL R K K S R P 0 1 0 1 0 0 0 2 1 0 2 2 0 0 0 2 3 0 0 2 0 0 16 2 0 0 1697.9424 P0A8R9 P0A8R9 235 250 hdfR HTH-type transcriptional regulator HdfR yes yes 3;4 2.4961E-17 102.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 96807000 28988000 31951000 0 0 18887000 16981000 0 0 2380 152 2572 14003;14004;14005;14006;14007;14008;14009;14010 10648;10649;10650;10651;10652;10653;10654;10655 10652 8 28988000 32705000 0 0 22783000 18811000 0 0 KKLPPPPPQAPPEEE EYYSEEERNAKAEKEKKLPPPPPQAPPEEE KKLPPPPPQAPPEEENESEPEEPSGVEGAA E K K E E N 1 0 0 0 0 1 3 0 0 0 1 2 0 0 7 0 0 0 0 0 0 0 15 2 2 8 1652.8774 LSD1-FL-His LSD1-FL-His 151 165 yes yes 2;3 4.2709E-39 181.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 2 2 8911400000 2206400000 2181000000 726670000 838010000 519590000 547530000 906060000 986190000 2381 24 2573 14011;14012;14013;14014;14015;14016;14017;14018;14019;14020;14021;14022;14023;14024;14025;14026;14027;14028 10656;10657;10658;10659;10660;10661;10662;10663;10664;10665;10666;10667;10668;10669;10670;10671;10672;10673;10674;10675;10676;10677;10678;10679;10680;10681;10682;10683;10684;10685;10686;10687;10688;10689;10690;10691;10692;10693;10694;10695;10696;10697 10683 41 33888000000 33254000000 6174400000 6353400000 7999600000 8298600000 6973300000 5659600000 KLADEVDE GKPFQSVSKVDESLEKLADEVDESAKEAEK KVDESLEKLADEVDESAKEAEKALTPFIDR E K L D E S 1 0 0 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 1 1 1 917.43419 P0A6Z3 P0A6Z3 492 499 htpG Chaperone protein HtpG yes yes 2 0.010744 65.252 By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 18883000 0 0 3935500 4157900 913490 0 4655800 5220400 2382 88 2574 14029;14030;14031;14032;14033 10698 10698 1 0 0 33439000 31524000 14064000 0 35832000 29959000 KLAGNLK SHMGLAARMMSQAMRKLAGNLKQSNTLLIF RMMSQAMRKLAGNLKQSNTLLIFINQIRMK R K L L K Q 1 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 7 1 0 1 742.47012 P0A7G6 P0A7G6 178 184 recA Protein RecA yes yes 2 0.0095537 57.102 By MS/MS By MS/MS By MS/MS 1 1 1 7729100 3913300 3597200 0 0 0 218500 0 0 2383 104 2575 14034;14035;14036 10699 10699 1 3913300 3682100 0 0 0 242050 0 0 KLDHGWWVVSHE ______________________________ IIEKLDHGWWVVSHEQKLWLPKGELPYGEA E K L H E Q 0 0 0 1 0 0 1 1 2 0 1 1 0 0 0 1 0 2 0 2 0 0 12 1 0 0 1491.7259 P32664 P32664 7 18 nudC NADH pyrophosphatase yes yes 3 0.0073821 42.976 By MS/MS By MS/MS By MS/MS 1 1 1 9228300 0 1085900 3634800 4507600 0 0 0 0 2384 340 2576 14037;14038;14039 10700 10700 1 0 16559000 30884000 34175000 0 0 0 0 KLDIATGE GKQHRVSEGQTVRLEKLDIATGETVEFAEV GQTVRLEKLDIATGETVEFAEVLMIANGEE E K L G E T 1 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 8 1 0 1 845.44945 P0AG48 P0AG48 24 31 rplU 50S ribosomal protein L21 yes yes 2 0.00053094 107.19 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 114980000 28173000 19029000 7633900 7490600 15996000 12764000 11684000 12211000 2385 258 2577 14040;14041;14042;14043;14044;14045;14046;14047 10701;10702;10703 10701 3 432870000 290190000 64864000 56790000 246270000 193460000 89921000 70078000 KLDIATGETVE GKQHRVSEGQTVRLEKLDIATGETVEFAEV VRLEKLDIATGETVEFAEVLMIANGEEVKI E K L V E F 1 0 0 1 0 0 2 1 0 1 1 1 0 0 0 0 2 0 0 1 0 0 11 1 1 1 1174.6081 P0AG48 P0AG48 24 34 rplU 50S ribosomal protein L21 yes yes 2 3.6222E-28 142.92 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 535030000 28833000 25114000 87900000 90576000 31776000 43411000 101940000 125480000 2386 258 2578 14048;14049;14050;14051;14052;14053;14054;14055 10704;10705;10706;10707;10708;10709;10710 10710 7 443010000 382990000 746870000 686700000 489220000 657960000 784550000 720120000 KLDQAGVSELATNQK AGEGAKVIYLSPQGRKLDQAGVSELATNQK KLDQAGVSELATNQKLILVCGRYEGIDERV R K L Q K L 2 0 1 1 0 2 1 1 0 0 2 2 0 0 0 1 1 0 0 1 0 0 15 1 1 2 1600.842 P0A873 P0A873 93 107 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2;3 0 375.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 613340000 178600000 130300000 0 0 155180000 149260000 0 0 2387 140 2579 14056;14057;14058;14059;14060;14061;14062;14063 10711;10712;10713;10714;10715;10716;10717;10718 10712 8 178600000 133380000 0 0 187190000 165340000 0 0 KLEMHQGHLVK GGTADAFTLFELFERKLEMHQGHLVKAAVE LFERKLEMHQGHLVKAAVELAKDWRTDRML R K L V K A 0 0 0 0 0 1 1 1 2 0 2 2 1 0 0 0 0 0 0 1 0 0 11 1 1 0 1318.718 P0A7B8 P0A7B8 64 74 hslV ATP-dependent protease subunit HslV yes yes 3 1.4144E-31 134.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 74905000 17750000 17262000 0 0 20630000 19264000 0 0 2388 100 2580 14064;14065;14066;14067 10719;10720;10721;10722 10719 4 17750000 17669000 0 0 24886000 21340000 0 0 KLFLSILR RRHLQQPLCNIPEARKLFLSILRHPGAVRR CNIPEARKLFLSILRHPGAVRRGLLPMHRH R K L L R H 0 1 0 0 0 0 0 0 0 1 3 1 0 1 0 1 0 0 0 0 0 0 8 1 0 0 988.64334 P27249 P27249 419 426 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 4.6718E-05 111.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 73842000 19753000 15719000 0 0 17207000 21164000 0 0 2389 320 2581 14068;14069;14070;14071 10723;10724;10725;10726 10724 4 19753000 16090000 0 0 20756000 23445000 0 0 KLHEHIDSR VEKMWTQRSHNPYWKKLHEHIDSRTVDNWC HNPYWKKLHEHIDSRTVDNWCDDHDQILKA K K L S R T 0 1 0 1 0 0 1 0 2 1 1 1 0 0 0 1 0 0 0 0 0 0 9 1 1 0 1133.5942 P0ACL2 P0ACL2 178 186 exuR Exu regulon transcriptional regulator yes yes 3 0.013985 29.767 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 4508900 1578400 1979600 0 0 615610 335280 0 0 2390 216 2582 14072;14073;14074;14075 10727 10727 1 1578400 2026300 0 0 742620 371410 0 0 KLIDATFADR TGNGYTNEPVLRLAKKLIDATFADRVFFCN LRLAKKLIDATFADRVFFCNSGAEANEAAL K K L D R V 2 1 0 2 0 0 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 10 1 0 2 1148.619 P77581 P77581 89 98 astC Succinylornithine transaminase yes yes 2;3 1.8048E-57 177.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 2391 437 2583 14076;14077;14078;14079 10728;10729;10730;10731 10729 4 0 0 0 0 0 0 0 0 KLKSNIEE DMPVIVVAPNNELLEKLKSNIEEVRARGGQ PNNELLEKLKSNIEEVRARGGQLYVFADQD E K L E E V 0 0 1 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 8 2 1 0 959.52876 P17169 P17169 529 536 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.0014865 109.01 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1466000000 201450000 201370000 0 0 96875000 105360000 0 860990000 2392 288 2584 14080;14081;14082;14083;14084 10732;10733 10733 2 3095200000 3070900000 0 0 1491500000 1596800000 0 4941100000 KLLALLAE NPLLALREKISALDEKLLALLAERRELAVE KISALDEKLLALLAERRELAVEVGKAKLLS E K L A E R 2 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 8 1 0 2 869.5586 P0A9J8 P0A9J8 20 27 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.016191 60.648 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 273480000 6536300 9132600 165180000 25904000 8622600 11388000 20338000 26374000 2393 166 2585 14085;14086;14087;14088;14089;14090;14091;14092 10734 10734 1 100430000 139270000 1403500000 196390000 132750000 172600000 156530000 151360000 KLLALLAERRE NPLLALREKISALDEKLLALLAERRELAVE ALDEKLLALLAERRELAVEVGKAKLLSHRP E K L R E L 2 2 0 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 11 3 1 2 1310.8034 P0A9J8 P0A9J8 20 30 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 6.7557E-07 89.266 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 2 2 588600000 61195000 77417000 29743000 30269000 68414000 66758000 105250000 149550000 2394 166 2586 14093;14094;14095;14096;14097;14098;14099;14100;14101;14102;14103;14104;14105;14106 10735;10736;10737;10738;10739;10740;10741;10742;10743 10739 9 940240000 1180600000 252720000 229490000 1053300000 1011800000 810060000 858220000 KLLDEGR KETQKSTCTGVEMFRKLLDEGRAGENVGVL CTGVEMFRKLLDEGRAGENVGVLLRGIKRE R K L G R A 0 1 0 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 1 1 0 829.46577 P0CE48;P0CE47 P0CE48 264 270 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 0.0040635 68.915 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 28659000 9237500 7883100 0 0 4891500 6647300 0 0 2395 269 2587 14107;14108;14109;14110;14111 10744;10745;10746 10745 3 9237500 8069200 0 0 5900700 7544000 0 0 KLLDYLK HHSRRGLLRMVSQRRKLLDYLKRKDVARYT LRMVSQRRKLLDYLKRKDVARYTQLIERLG R K L L K R 0 0 0 1 0 0 0 0 0 0 3 2 0 0 0 0 0 0 1 0 0 0 7 1 0 0 891.54295 P0ADZ4 P0ADZ4 65 71 rpsO 30S ribosomal protein S15 yes yes 2 7.7196E-46 170.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2621700000 774490000 662120000 0 0 447150000 737940000 0 0 2396 231 2588 14112;14113;14114;14115 10747;10748;10749;10750 10750 4 774490000 677740000 0 0 539390000 817480000 0 0 KLLDYLKR HHSRRGLLRMVSQRRKLLDYLKRKDVARYT RMVSQRRKLLDYLKRKDVARYTQLIERLGL R K L K R K 0 1 0 1 0 0 0 0 0 0 3 2 0 0 0 0 0 0 1 0 0 0 8 2 0 0 1047.6441 P0ADZ4 P0ADZ4 65 72 rpsO 30S ribosomal protein S15 yes yes 2;3 4.5705E-107 184.49 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 212470000 71773000 84923000 0 0 23761000 32009000 0 0 2397 231 2589 14116;14117;14118;14119;14120;14121;14122;14123 10751;10752;10753;10754;10755;10756;10757;10758 10753 8 71773000 86927000 0 0 28663000 35459000 0 0 KLLGAKTE GYECPPNHQLVEVVEKLLGAKTEVVNYCTE QLVEVVEKLLGAKTEVVNYCTEAPFIQTLC E K L T E V 1 0 0 0 0 0 1 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 8 2 0 1 858.51747 P23908 P23908 319 326 argE Acetylornithine deacetylase yes yes 2 5.7221E-25 125.49 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 602910000 75564000 34834000 122650000 147360000 17189000 20545000 805130 183960000 2398 308 2590 14124;14125;14126;14127;14128;14129;14130;14131 10759;10760 10759 1 1161000000 531230000 1042200000 1117200000 264640000 311400000 6196500 1055700000 KLLTGDSPFAANALGK NIINDDITGRVHKDRKLLTGDSPFAANALG LLTGDSPFAANALGKLAAQEMLAAYAG___ R K L G K L 3 0 1 1 0 0 0 2 0 0 3 2 0 1 1 1 1 0 0 0 0 0 16 1 0 4 1601.8777 P31658 P31658 256 271 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 3 4.4765E-11 85.493 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87468000 30252000 35076000 0 0 22140000 0 0 0 2399 335 2591 14132;14133;14134;14135 10761;10762;10763;10764 10762 4 30252000 35904000 0 0 26708000 0 0 0 KLNEIPQENIQR SLGRRLLNHALGGSRKLNEIPQENIQRELD GSRKLNEIPQENIQRELDRMKLATLDDLLA R K L Q R E 0 1 2 0 0 2 2 0 0 2 1 1 0 0 1 0 0 0 0 0 0 0 12 1 2 1 1480.7998 P0AG24 P0AG24 499 510 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT;GTP pyrophosphokinase;Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase yes yes 3 0.0017187 48.115 By matching By MS/MS By MS/MS 1 1 1 10882000 5461000 5421400 0 0 0 0 0 0 2400 254 2592 14136;14137;14138 10765;10766 10765 2 5461000 5549400 0 0 0 0 0 0 KLPDDQAQK LHPLSDVDLLILSRKKLPDDQAQKVGELLT LILSRKKLPDDQAQKVGELLTLLWDVKLEV K K L Q K V 1 0 0 2 0 2 0 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 9 1 0 2 1041.5455 P27249 P27249 115 123 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0081819 73.665 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 21702000 7776600 7729000 0 0 4077600 2119000 0 0 2401 320 2593 14139;14140;14141;14142;14143 10767 10767 0 13888000 7911400 0 0 4918900 2347300 0 0 KLPPPPPQAPPEEENESEPEEPSGVEGAAFQSR YYSEEERNAKAEKEKKLPPPPPQAPPEEEN PEEPSGVEGAAFQSRLPHDRMTSQEAACFP K K L S R L 3 1 1 0 0 2 8 2 0 0 1 1 0 1 9 3 0 0 0 1 0 0 33 1 8 12 3525.6536 LSD1-FL-His LSD1-FL-His 152 184 yes yes 3;4 2.1542E-234 222.04 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 3 28098000000 8170900000 6916400000 0 0 6195800000 6814900000 0 0 2402 24 2594 14144;14145;14146;14147;14148;14149;14150;14151;14152;14153;14154;14155;14156;14157;14158;14159;14160 10768;10769;10770;10771;10772;10773;10774;10775;10776;10777;10778;10779;10780;10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791;10792;10793;10794;10795;10796 10787 29 8299500000 7134000000 0 0 7625700000 7594600000 0 0 KLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHDR YYSEEERNAKAEKEKKLPPPPPQAPPEEEN GVEGAAFQSRLPHDRMTSQEAACFPDIISG K K L D R M 3 2 1 1 0 2 8 2 1 0 2 1 0 1 10 3 0 0 0 1 0 0 38 2 8 13 4143.9774 LSD1-FL-His LSD1-FL-His 152 189 yes yes 5 0.0063004 23.756 By MS/MS 1 11712000 11712000 0 0 0 0 0 0 0 2403 24 2595 14161 10797 10797 1 11712000 0 0 0 0 0 0 0 KLQELGATR DKKSARIRRATRARRKLQELGATRLVVHRT ATRARRKLQELGATRLVVHRTPRHIYAQVI R K L T R L 1 1 0 0 0 1 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 1 1 1 1014.5822 P0C018 P0C018 17 25 rplR 50S ribosomal protein L18 yes yes 2 0.00013359 103.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31568000 9068500 8276700 0 0 7944500 6278600 0 0 2404 266 2596 14162;14163;14164;14165 10798;10799;10800;10801 10799 4 9068500 8472100 0 0 9583500 6955300 0 0 KLSEQGLITR NLLDVSTQTVRRDIRKLSEQGLITRHHGGA RRDIRKLSEQGLITRHHGGAGRASSVVNTA R K L T R H 0 1 0 0 0 1 1 1 0 1 2 1 0 0 0 1 1 0 0 0 0 0 10 1 1 0 1143.6612 P32144 P32144 47 56 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2;3 5.8301E-05 102.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 29214000 11967000 11857000 0 0 4432000 958560 0 0 2405 339 2597 14166;14167;14168;14169;14170;14171;14172 10802;10803;10804;10805;10806 10802 5 11967000 12137000 0 0 5346300 1061900 0 0 KLTKPVE MLDTNMKTQLKAYLEKLTKPVELIATLDDS TQLKAYLEKLTKPVELIATLDDSAKSAEIK E K L V E L 0 0 0 0 0 0 1 0 0 0 1 2 0 0 1 0 1 0 0 1 0 0 7 2 0 1 813.496 P35340 P35340 16 22 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.0056266 75.189 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70781000 22404000 20929000 0 0 14293000 13156000 0 0 2406 348 2598 14173;14174;14175;14176 10807 10807 0 344230000 319170000 0 0 220050000 199390000 0 0 KLTKPVELIATLDDSAKSAE MLDTNMKTQLKAYLEKLTKPVELIATLDDS VELIATLDDSAKSAEIKELLAEIAELSDKV E K L A E I 3 0 0 2 0 0 2 0 0 1 3 3 0 0 1 2 2 0 0 1 0 0 20 3 1 4 2128.1627 P35340 P35340 16 35 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3;4 9.1239E-34 90.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 3 2 3 791260000 33763000 49101000 24063000 32782000 312730000 219810000 17567000 101440000 2407 348 2599 14177;14178;14179;14180;14181;14182;14183;14184;14185;14186;14187;14188;14189;14190;14191;14192;14193;14194;14195;14196;14197 10808;10809;10810;10811;10812;10813;10814;10815;10816;10817;10818;10819;10820;10821;10822;10823;10824;10825 10812 18 518760000 748790000 204460000 248540000 4814700000 3331500000 135200000 582160000 KLTKPVELIATLDDSAKSAEIKE MLDTNMKTQLKAYLEKLTKPVELIATLDDS IATLDDSAKSAEIKELLAEIAELSDKVTFK E K L K E L 3 0 0 2 0 0 3 0 0 2 3 4 0 0 1 2 2 0 0 1 0 0 23 4 2 4 2498.3843 P35340 P35340 16 38 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3;4;5 2.4323E-39 109.41 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 3 2 2 3 3 1 3 487510000 5300700 9338300 7006300 6938300 232880000 183580000 1470800 40998000 2408 348 2600 14198;14199;14200;14201;14202;14203;14204;14205;14206;14207;14208;14209;14210;14211;14212;14213;14214;14215;14216;14217 10826;10827;10828;10829;10830;10831;10832;10833;10834;10835;10836;10837 10829 10 81444000 142410000 59532000 52603000 3585400000 2782400000 11320000 235280000 KLTTDASEWEVLLDGEK SEQELVGEQGHWQAKKLTTDASEWEVLLDG TTDASEWEVLLDGEKVGEVKWSLVGEHNMH K K L E K V 1 0 0 2 0 0 3 1 0 0 3 2 0 0 0 1 2 1 0 1 0 0 17 1 3 1 1932.968 P37773 P37773 251 267 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 3 7.2265E-08 77.468 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 2 1 42618000 12674000 11504000 0 2516700 7383100 8539900 0 0 2409 360 2601 14218;14219;14220;14221;14222;14223;14224;14225;14226;14227 10838;10839;10840;10841;10842 10842 5 33737000 27708000 0 19081000 31004000 9460300 0 0 KLVLLSAE LAVHEQVALSRLHDEKLVLLSAEFATREQI LSRLHDEKLVLLSAEFATREQIDHYCEKAG E K L A E F 1 0 0 0 0 0 1 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 8 1 0 1 871.53787 P27111 P27111 190 197 cynR HTH-type transcriptional regulator CynR yes yes 2 0.0071365 67.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7606300 777880 0 0 1622200 0 0 1779300 3426800 2410 319 2602 14228;14229;14230;14231 10843 10843 1 11952000 0 0 12299000 0 0 13694000 19666000 KMAGQMGNER SIGQNQTPGKVFKGKKMAGQMGNERVTVQS VFKGKKMAGQMGNERVTVQSLDVVRVDAER K K M E R V 1 1 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 10 1 1 1 1120.5117 P60438 P60438 160 169 rplC 50S ribosomal protein L3 yes yes 3 0.0069425 26.971 By MS/MS By matching 1 1 3569700 0 3137800 0 0 431920 0 0 0 2411 380 2603 14232;14233 10844 10844 1 0 3211800 0 0 521030 0 0 0 KNENIKTLPAKRNEQDQKQLIVP EGVETGFSGAKITGPKNENIKTLPAKRNEQ PAKRNEQDQKQLIVPLADSLKPGTYTVDWH P K N V P L 1 1 3 1 0 3 2 0 0 2 2 4 0 0 2 0 1 0 0 1 0 0 23 5 2 2 2703.5032 P0AA57 P0AA57 69 91 yobA Protein YobA yes yes 5 0.0076501 20.256 By MS/MS By MS/MS 1 1 36069000 0 0 0 0 12830000 23239000 0 0 2412 184 2604 14234;14235 10845 10845 1 0 0 0 0 18266000 33127000 0 0 KNHEEEMKDLR EMQIESLTEELAYLKKNHEEEMKDLRNVST AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP K K N L R N 0 1 1 1 0 0 3 0 1 0 1 2 1 0 0 0 0 0 0 0 0 0 11 2 3 0 1427.6827 CON__P13645 CON__P13645 285 295 yes yes 3 0.0012704 60.49 By MS/MS By MS/MS 1 1 19365000 8682200 0 0 0 10683000 0 0 0 + 2413 12 2605 14236;14237 10846;10847 10846 2 8682200 0 0 0 12887000 0 0 0 KNNQHDVAIVR MCSGKVYYDLLEQRRKNNQHDVAIVRIEQL EQRRKNNQHDVAIVRIEQLYPFPHKAMQEV R K N V R I 1 1 2 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 11 1 0 1 1292.6949 P0AFG3 P0AFG3 834 844 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 1.5294E-13 107.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71601000 30196000 28145000 0 0 13260000 0 0 0 2414 246 2606 14238;14239;14240;14241 10848;10849;10850;10851 10848 4 30196000 28810000 0 0 15995000 0 0 0 KNNSLSQE DTITLLQMEIEELKEKNNSLSQEVQNAQHQ EIEELKEKNNSLSQEVQNAQHQREELEREN E K N Q E V 0 0 2 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 8 1 0 0 918.44067 P0AF36 P0AF36 35 42 zapB Cell division protein ZapB yes yes 2 1.0198E-11 130.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 2 22280000 772420 769160 1038600 2247300 0 0 10236000 7217200 2415 242 2607 14242;14243;14244;14245;14246;14247;14248;14249 10852;10853;10854;10855;10856;10857;10858;10859;10860 10856 9 772420 787310 8824500 17038000 0 0 78775000 41418000 KNPHQHQSPLHDSSE ______________________________ KNPHQHQSPLHDSSEAKPGMDSLAPEDGSH E K N S E A 0 0 1 1 0 2 1 0 3 0 1 1 0 0 2 3 0 0 0 0 0 0 15 1 0 2 1739.7976 P21179 P21179 7 21 katE Catalase HPII yes yes 2;3;4 3.6654E-20 108.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 1 3 2 2 2 369920000 67064000 91251000 28214000 20398000 20525000 14743000 62203000 65522000 2416 293 2608 14250;14251;14252;14253;14254;14255;14256;14257;14258;14259;14260;14261;14262;14263;14264;14265;14266;14267 10861;10862;10863;10864;10865;10866;10867;10868;10869;10870 10863 9 1030400000 1391600000 239730000 154650000 316000000 223450000 478720000 376020000 KNQAILPLK EGDSAGGSAKQGRNRKNQAILPLKGKILNV KQGRNRKNQAILPLKGKILNVEKARFDKML R K N L K G 1 0 1 0 0 1 0 0 0 1 2 2 0 0 1 0 0 0 0 0 0 0 9 1 0 2 1023.6441 P0AES6 P0AES6 439 447 gyrB DNA gyrase subunit B yes yes 2 0.0056644 56.547 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18476000 4116900 4807700 0 0 5461100 4090500 0 0 2417 239 2609 14268;14269;14270;14271 10871;10872 10871 2 4116900 4921200 0 0 6587700 4531400 0 0 KNRDRCLVILSRNDE EYADIATKCVTNFREKNRDRCLVILSRNDE KNRDRCLVILSRNDEALNSQRTSEELHHYY E K N D E A 0 3 2 2 1 0 1 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 15 4 0 0 1886.9745 P0A8E1 P0A8E1 122 136 ycfP UPF0227 protein YcfP yes yes 4 0.0026465 30.961 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5599400 1080900 1616200 0 0 862720 2039600 0 0 2418 143 2610 14272;14273;14274;14275 10873;10874;10875;10876 10876 4 16608000 24647000 0 0 13282000 30913000 0 0 KNSYICPQRHQFDMAKE MSFSCPLCHQPLSREKNSYICPQRHQFDMA SYICPQRHQFDMAKEGYVNLLPVQHKRSRD E K N K E G 1 1 1 1 1 2 1 0 1 1 0 2 1 1 1 1 0 0 1 0 0 0 17 3 0 2 2150.999 P36999 P36999 16 32 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 4 0.0080525 22.051 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 45407000 3849500 3386700 11033000 9594900 5322600 6741900 5478600 0 2419 352 2611 14276;14277;14278;14279;14280;14281;14282 10877;10878;10879;10880 10879 4 59147000 51648000 93745000 72744000 81946000 102180000 42165000 0 KPAVATAPATGQVQSLTR ______________________________ VATAPATGQVQSLTRGLKLLEWIAESNGSV R K P T R G 4 1 0 0 0 2 0 1 0 0 1 1 0 0 2 1 3 0 0 2 0 0 18 1 0 6 1794.9952 P16528 P16528 12 29 iclR Acetate operon repressor yes yes 2;3 1.3338E-186 185.71 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 382440000 84111000 96921000 0 0 81241000 120170000 0 0 2420 285 2612 14283;14284;14285;14286;14287;14288;14289;14290 10881;10882;10883;10884;10885;10886;10887;10888 10881 8 84111000 99208000 0 0 98002000 133120000 0 0 KPDHYEEIHMPK RDAFWEMKEKGEAYKKPDHYEEIHMPKNSG AYKKPDHYEEIHMPKNSGAGIVIAAFSTIF K K P P K N 0 0 0 1 0 0 2 0 2 1 0 2 1 0 2 0 0 0 1 0 0 0 12 1 2 2 1522.7238 P0ABI8 P0ABI8 576 587 cyoB Cytochrome bo(3) ubiquinol oxidase subunit 1 yes yes 3 0.005907 13.185 By MS/MS 1 0 0 0 0 0 0 0 0 0 2421 202 2613 14291 10889 10889 1 0 0 0 0 0 0 0 0 KPETINYR ASPDMIRSWSFGEVKKPETINYRTFKPERD WSFGEVKKPETINYRTFKPERDGLFCARIF K K P Y R T 0 1 1 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 1 0 0 0 8 1 1 1 1019.54 P0A8T7 P0A8T7 40 47 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.00052282 102.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 48355000 14138000 16509000 0 0 9390800 8317900 0 0 2422 153 2614 14292;14293;14294;14295 10890;10891;10892;10893 10893 4 14138000 16899000 0 0 11328000 9214300 0 0 KPLIISGTNAGSLEVIQAAANVAK QSKIDVIVQALAGAKKPLIISGTNAGSLEV AGSLEVIQAAANVAKALKGRGADVGITMIA K K P A K A 5 0 2 0 0 1 1 2 0 3 2 2 0 0 1 2 1 0 0 2 0 0 24 1 1 6 2364.3377 P33602 P33602 495 518 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 4.4392E-96 163.95 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 96415000 14635000 24511000 0 0 31196000 26073000 0 0 2423 345 2615 14296;14297;14298;14299 10894;10895;10896;10897 10895 4 14635000 25089000 0 0 37632000 28883000 0 0 KPLYILATADEETSMAGAR FILDALRDVDVTKLKKPLYILATADEETSM ILATADEETSMAGARYFAETTALRPDCAII K K P A R Y 4 1 0 1 0 0 2 1 0 1 2 1 1 0 1 1 2 0 1 0 0 0 19 1 2 5 2036.0248 P23908 P23908 134 152 argE Acetylornithine deacetylase yes yes 3 6.3256E-64 156.13 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 114050000 19780000 25561000 0 0 31964000 36744000 0 0 2424 308 2616;2617 14300;14301;14302;14303;14304;14305;14306 10898;10899;10900;10901;10902 10901 255 5 19780000 26164000 0 0 38558000 40704000 0 0 KPQDLFDEFAGK AHRGRLNVLVNVLGKKPQDLFDEFAGKHKE LGKKPQDLFDEFAGKHKEHLGTGDVKYHMG K K P G K H 1 0 0 2 0 1 1 1 0 0 1 2 0 2 1 0 0 0 0 0 0 0 12 1 1 2 1393.6878 P0AFG3 P0AFG3 274 285 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 7.6368E-57 181.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 349170000 77475000 81801000 0 0 101290000 88607000 0 0 2425 246 2618 14307;14308;14309;14310;14311;14312;14313;14314 10903;10904;10905;10906;10907;10908;10909;10910;10911 10911 9 77475000 83731000 0 0 122190000 98157000 0 0 KPSFLITNPGSNQGPR SDKVTFKEDNSLPVRKPSFLITNPGSNQGP PSFLITNPGSNQGPRFAGSPLGHEFTSLVL R K P P R F 0 1 2 0 0 1 0 2 0 1 1 1 0 1 3 2 1 0 0 0 0 0 16 1 0 3 1711.9006 P35340 P35340 62 77 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 6.5608E-199 227.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2042700000 537170000 515850000 0 0 454580000 535100000 0 0 2426 348 2619 14315;14316;14317;14318;14319;14320;14321;14322 10912;10913;10914;10915;10916;10917;10918;10919;10920;10921;10922 10917 11 537170000 528020000 0 0 548360000 592780000 0 0 KPVVYVGGGAITAGCHQQLK KGQIKRALQTLVAAKKPVVYVGGGAITAGC VGGGAITAGCHQQLKETVEALNLPVVCSLM K K P L K E 2 0 0 0 1 2 0 4 1 1 1 2 0 0 1 0 1 0 1 3 0 0 20 1 0 3 2082.1044 P00893 P00893 208 227 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 3 8.0387E-55 133.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 83862000 30142000 24100000 0 0 12351000 17270000 0 0 2427 29 2620 14323;14324;14325;14326 10923;10924;10925;10926 10924 4 30142000 24669000 0 0 14899000 19131000 0 0 KQAGELQE ______________________________ ______________________________ E K Q Q E K 1 0 0 0 0 2 2 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 1 1 1 901.45051 P0A7W1 P0A7W1 6 13 rpsE 30S ribosomal protein S5 yes yes 2 0.0043663 76.035 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 18198000 464410 474840 2859500 3210300 0 0 6167400 5021300 2428 131 2621 14327;14328;14329;14330;14331;14332 10927 10927 1 7135600 7241400 24297000 24339000 0 0 47466000 28816000 KQANLTPLLAILLHK GKPMPIVIPSYNGARKQANLTPLLAILLHK KQANLTPLLAILLHKLGFPVVVHGVSEDPT R K Q H K L 2 0 1 0 0 1 0 0 1 1 5 2 0 0 1 0 1 0 0 0 0 0 15 1 0 3 1672.04 P30177 P30177 93 107 ybiB Uncharacterized protein YbiB yes yes 3 9.8688E-08 79.875 By matching By matching By MS/MS By MS/MS 1 1 1 1 74671000 20271000 14920000 0 0 18197000 21283000 0 0 2429 332 2622 14333;14334;14335;14336 10928;10929 10928 2 20271000 15272000 0 0 21952000 23577000 0 0 KQDIIFAILK TLGENMGLENLARMRKQDIIFAILKQHAKS LARMRKQDIIFAILKQHAKSGEDIFGDGVL R K Q L K Q 1 0 0 1 0 1 0 0 0 3 1 2 0 1 0 0 0 0 0 0 0 0 10 1 0 1 1187.7278 P0AG30 P0AG30 31 40 rho Transcription termination factor Rho yes yes 2 0.0044553 65.224 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16695000 2763100 3308500 0 0 5255100 5367900 0 0 2430 256 2623 14337;14338;14339;14340 10930;10931 10931 2 2763100 3386600 0 0 6339200 5946400 0 0 KQDTAGSELLPQAKDPE QINLIDREGMRVLYEKQDTAGSELLPQAKD DTAGSELLPQAKDPETTAQWIERCLAGSEP E K Q P E T 2 0 0 2 0 2 2 1 0 0 2 2 0 0 2 1 1 0 0 0 0 0 17 2 1 4 1825.9058 P30177 P30177 256 272 ybiB Uncharacterized protein YbiB yes yes 3 0.0012053 43.454 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 93019000 0 0 22292000 22067000 8225400 8104900 14427000 17903000 2431 332 2624 14341;14342;14343;14344;14345;14346 10932;10933;10934 10933 3 0 0 189410000 167300000 126640000 122840000 111030000 102740000 KQFAQTPALYR QYRFDSQQTFTRAFKKQFAQTPALYRRSPE RAFKKQFAQTPALYRRSPEWSAFGIRPPLR K K Q Y R R 2 1 0 0 0 2 0 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 11 1 0 3 1321.7143 P0ACI0 P0ACI0 94 104 rob Right origin-binding protein yes yes 3 3.3495E-05 66.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27242000 7104100 8498900 0 0 4707900 6931500 0 0 2432 211 2625 14347;14348;14349;14350 10935;10936;10937;10938 10936 4 7104100 8699500 0 0 5679200 7678600 0 0 KQFGLTPLGHFTVNPE GKGYFVFHDAYGYFEKQFGLTPLGHFTVNP QFGLTPLGHFTVNPEIQPGAQRLHEIRTQL E K Q P E I 0 0 1 0 0 1 1 2 1 0 2 1 0 2 2 0 2 0 0 1 0 0 16 1 0 2 1783.9257 P39172 P39172 215 230 znuA High-affinity zinc uptake system protein ZnuA yes yes 2;3 2.2322E-31 159.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 2 348800000 12020000 19640000 35020000 43071000 22217000 21646000 86587000 108590000 2433 361 2626 14351;14352;14353;14354;14355;14356;14357;14358;14359;14360;14361 10939;10940;10941;10942;10943;10944 10944 6 184680000 299520000 297560000 326550000 342060000 328070000 666400000 623200000 KQISNLQQSISDAEQR NRVIQRLRSEIDNVKKQISNLQQSISDAEQ QISNLQQSISDAEQRGENALKDAKNKLNDL K K Q Q R G 1 1 1 1 0 4 1 0 0 2 1 1 0 0 0 3 0 0 0 0 0 0 16 1 1 1 1843.9388 CON__P04264 CON__P04264 417 432 yes yes 3 4.3959E-83 148.18 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76024000 14750000 11385000 0 0 19723000 30166000 0 0 + 2434 9 2627 14362;14363;14364;14365 10945;10946;10947;10948 10947 4 14750000 11654000 0 0 23792000 33417000 0 0 KQLVLNLVSSPGSGK NNRLAERNRARFAARKQLVLNLVSSPGSGK KQLVLNLVSSPGSGKTTLLTETLMRLKDSV R K Q G K T 0 0 1 0 0 1 0 2 0 0 3 2 0 0 1 3 0 0 0 2 0 0 15 1 0 1 1525.8828 P0AAN3 P0AAN3 103 117 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 0.00044391 55.186 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42712000 11194000 12922000 0 0 5114200 13482000 0 0 2435 187 2628 14366;14367;14368;14369 10949;10950;10951;10952 10949 4 11194000 13227000 0 0 6169200 14935000 0 0 KQQTVYGPLMEYIADNR VIAVGELFDGMSRVKKQQTVYGPLMEYIAD QTVYGPLMEYIADNRIHAVSIKAYTPAEWA K K Q N R I 1 1 1 1 0 2 1 1 0 1 1 1 1 0 1 0 1 0 2 1 0 0 17 1 1 2 2024.999 P0A9W6 P0A9W6 45 61 ibaG Acid stress protein IbaG yes yes 2;3 4.3136E-37 116.96 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 97276000 22903000 28271000 0 0 17181000 28922000 0 0 2436 178 2629 14370;14371;14372;14373;14374;14375;14376;14377 10953;10954;10955;10956;10957;10958;10959 10959 7 22903000 28938000 0 0 20726000 32039000 0 0 KQVEEAGDKLPADDK VQTRNQGDHLLHSTRKQVEEAGDKLPADDK KQVEEAGDKLPADDKTAIESALTALETALK R K Q D K T 2 0 0 3 0 1 2 1 0 0 1 3 0 0 1 0 0 0 0 1 0 0 15 2 2 3 1641.821 P0A6Y8 P0A6Y8 548 562 dnaK Chaperone protein DnaK yes yes 3;4 0 243.9 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 146570000 40045000 50396000 0 0 23737000 32394000 0 0 2437 86 2630 14378;14379;14380;14381;14382;14383 10960;10961;10962;10963;10964;10965 10960 6 40045000 51586000 0 0 28634000 35885000 0 0 KQVSDGVAHIHASFNNTIVTITDR ______________________________ IHASFNNTIVTITDRQGNALGWATAGGSGF R K Q D R Q 2 1 2 2 0 1 0 1 2 3 0 1 0 1 0 2 3 0 0 3 0 0 24 1 0 2 2622.3514 P0A7R9 P0A7R9 14 37 rpsK 30S ribosomal protein S11 yes yes 3;4 1.0814E-63 140.11 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 229070000 69748000 32761000 0 0 56561000 69999000 0 0 2438 121 2631 14384;14385;14386;14387;14388;14389 10966;10967;10968;10969;10970;10971 10966 6 69748000 33534000 0 0 68230000 77544000 0 0 KRDQVIE ERVSMPDFDVDFCMEKRDQVIEHVADMYGR FDVDFCMEKRDQVIEHVADMYGRDAVSQII E K R I E H 0 1 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 7 2 0 0 886.48723 P10443 P10443 410 416 dnaE DNA polymerase III subunit alpha yes yes 3 0.012119 41.502 By MS/MS 1 0 0 0 0 0 0 0 0 0 2439 273 2632 14390 10972 10972 1 0 0 0 0 0 0 0 0 KRIEAIPQIDK DPMCLDAFPKLVCFKKRIEAIPQIDKYLKS VCFKKRIEAIPQIDKYLKSSKYIAWPLQGW K K R D K Y 1 1 0 1 0 1 1 0 0 3 0 2 0 0 1 0 0 0 0 0 0 0 11 2 1 2 1309.7718 GST-Nek6 GST-Nek6 181 191 yes yes 3 7.8683E-05 67.08 By matching By MS/MS By MS/MS 1 1 1 111110000 3611900 0 0 0 50531000 56965000 0 0 2440 23 2633 14391;14392;14393 10973;10974 10973 2 3611900 0 0 0 60956000 63105000 0 0 KRPFYQVVVADSR ______________________________ AKKRPFYQVVVADSRNARNGRFIERVGFFN K K R S R N 1 2 0 1 0 1 0 0 0 0 0 1 0 1 1 1 0 0 1 3 0 0 13 2 0 2 1563.8522 P0A7T3 P0A7T3 13 25 rpsP 30S ribosomal protein S16 yes yes 3 2.8461E-14 118.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 108500000 31437000 25067000 0 0 22603000 29389000 0 0 2441 124 2634 14394;14395;14396;14397 10975;10976;10977 10975 3 31437000 25659000 0 0 27267000 32557000 0 0 KRWIQQRIE GPIGAEYMHITSTEEKRWIQQRIESGRATF ITSTEEKRWIQQRIESGRATFNSEEKKRFL E K R I E S 0 2 0 0 0 2 1 0 0 2 0 1 0 0 0 0 0 1 0 0 0 0 9 3 0 0 1255.7149 P0AFG3 P0AFG3 181 189 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 0.020106 38.776 By MS/MS By MS/MS By matching By matching 1 1 1 1 30298000 0 0 9979500 11298000 0 0 4123800 4897200 2442 246 2635 14398;14399;14400;14401 10978 10978 1 0 0 84794000 85655000 0 0 31737000 28104000 KSDLEMQYE DINGLRQVLDNLTMEKSDLEMQYETLQEEL DNLTMEKSDLEMQYETLQEELMALKKNHKE E K S Y E T 0 0 0 1 0 1 2 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 9 1 1 0 1141.4961 CON__P35527 CON__P35527 271 279 yes yes 2 0.00059413 76.679 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 80493000 0 0 8053700 6691400 2646200 2856100 28363000 31883000 + 2443 15 2636 14402;14403;14404;14405;14406;14407 10979;10980 10980 21 2 0 0 68431000 50731000 3192100 3164000 218290000 182970000 KSGLPVMRP TTLKPYLKEAVALNAKSGLPVMRPLFLHYE AVALNAKSGLPVMRPLFLHYEDDAHTYTLK A K S R P L 0 1 0 0 0 0 0 1 0 0 1 1 1 0 2 1 0 0 0 1 0 0 9 2 0 1 983.55862 P32138 P32138 581 589 yihQ Alpha-glucosidase YihQ yes yes 2 0.0039661 38.238 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2444 338 2637 14408;14409 10981;10982 10981 273 28 0 0 0 0 0 0 0 0 0 KSTPFAAQVAAER LGWATAGGSGFRGSRKSTPFAAQVAAERCA SRKSTPFAAQVAAERCADAVKEYGIKNLEV R K S E R C 4 1 0 0 0 1 1 0 0 0 0 1 0 1 1 1 1 0 0 1 0 0 13 1 1 5 1374.7256 P0A7R9 P0A7R9 57 69 rpsK 30S ribosomal protein S11 yes yes 2;3 2.6023E-86 181.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1106400000 307930000 294570000 0 0 261740000 242150000 0 0 2445 121 2638 14410;14411;14412;14413;14414;14415;14416;14417 10983;10984;10985;10986;10987;10988 10988 6 307930000 301520000 0 0 315740000 268250000 0 0 KSVAGFK LAAISGQKPLITKARKSVAGFKIRQGYPIG KPLITKARKSVAGFKIRQGYPIGCKVTLRG R K S F K I 1 0 0 0 0 0 0 1 0 0 0 2 0 1 0 1 0 0 0 1 0 0 7 1 0 1 735.42792 P62399 P62399 72 78 rplE 50S ribosomal protein L5 yes yes 2 0.015529 52.683 By MS/MS 1 2576000 0 0 0 0 2576000 0 0 0 2446 388 2639 14418 10989 10989 0 0 0 0 0 3107500 0 0 0 KTAEDYLGEPVTEAVITVPAYFNDAQR MAPPQISAEVLKKMKKTAEDYLGEPVTEAV EAVITVPAYFNDAQRQATKDAGRIAGLEVK K K T Q R Q 4 1 1 2 0 1 3 1 0 1 1 1 0 1 2 0 3 0 2 3 0 0 27 1 3 6 2996.4767 P0A6Y8 P0A6Y8 125 151 dnaK Chaperone protein DnaK yes yes 3 3.0679E-59 134.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 534660000 183110000 101990000 0 0 96283000 153270000 0 0 2447 86 2640 14419;14420;14421;14422 10990;10991;10992;10993 10992 4 183110000 104400000 0 0 116150000 169790000 0 0 KTDSVANRRLA AKELRRVVEPLITLAKTDSVANRRLAFART ITLAKTDSVANRRLAFARTRDNEIVAKLFN A K T L A F 2 2 1 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 11 3 0 1 1229.684 P0AG44 P0AG44 56 66 rplQ 50S ribosomal protein L17 yes yes 3 0.016268 22.474 By MS/MS By MS/MS By MS/MS 1 2 1 17438000 4416200 6445400 0 0 0 6576700 0 0 2448 257 2641 14423;14424;14425;14426 10994;10995;10996 10996 0 26658000 34145000 0 0 0 9375000 0 0 KTELTLNVLQTMNAQE ______________________________ TELTLNVLQTMNAQEYEDIRAAGSDERREL M K T Q E Y 1 0 2 0 0 2 2 0 0 0 3 1 1 0 0 0 3 0 0 1 0 0 16 1 1 1 1831.935 P10031 P10031 2 17 psiB Protein PsiB yes yes 3 0.0037213 30.133 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 0 0 0 0 0 0 0 0 0 2449 271 2642 14427;14428;14429;14430;14431 10997 10997 57;58;59 0 0 0 0 0 0 0 0 0 KTEVVNYCTEAP PNHQLVEVVEKLLGAKTEVVNYCTEAPFIQ LGAKTEVVNYCTEAPFIQTLCPTLVLGPGS A K T A P F 1 0 1 0 1 0 2 0 0 0 0 1 0 0 1 0 2 0 1 2 0 0 12 1 2 1 1409.6497 P23908 P23908 324 335 argE Acetylornithine deacetylase yes yes 2 3.0143E-26 119.68 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2450 308 2643 14432;14433 10998;10999 10999 2 0 0 0 0 0 0 0 0 KTFQEILAALGTGDALASK GHLRKDLTAADGQTRKTFQEILAALGTGDA EILAALGTGDALASKYRRQLYALLY_____ R K T S K Y 4 0 0 1 0 1 1 2 0 1 3 2 0 1 0 1 2 0 0 0 0 0 19 1 1 4 1933.052 P77395 P77395 256 274 ybbN Uncharacterized protein YbbN yes yes 3 1.9036E-12 85.087 By MS/MS By MS/MS By MS/MS 1 1 1 26733000 10274000 0 0 0 10153000 6306500 0 0 2451 431 2644 14434;14435;14436 11000;11001;11002 11001 1 10274000 0 0 0 12247000 6986200 0 0 KTGFDEIYLPFR TPARGEPDKLAIEARKTGFDEIYLPFRADQ EARKTGFDEIYLPFRADQAQREASRCLKCG R K T F R A 0 1 0 1 0 0 1 1 0 1 1 1 0 2 1 0 1 0 1 0 0 0 12 1 1 1 1484.7664 P37127 P37127 205 216 aegA Protein AegA yes yes 3 4.2923E-06 66.262 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 8818900 2742300 0 0 0 2174700 3901900 0 0 2452 355 2645 14437;14438;14439;14440 11003;11004;11005 11003 3 2742300 0 0 0 2623300 4322500 0 0 KTYLVTLE GQWSHRITSPRHHCEKTYLVTLESPVADDT SPRHHCEKTYLVTLESPVADDTAEQFAKGV E K T L E S 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 2 0 1 1 0 0 8 1 0 0 965.54335 P0AA43 P0AA43 130 137 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 0.0058557 89.142 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1670200000 66380000 88317000 274320000 260970000 30858000 32071000 396590000 520670000 2453 183 2646 14441;14442;14443;14444;14445;14446;14447;14448 11006;11007;11008;11009 11007 4 1019900000 1346800000 2330900000 1978600000 475090000 486090000 3052300000 2988000000 KTYLVTLESPVADDTAE GQWSHRITSPRHHCEKTYLVTLESPVADDT YLVTLESPVADDTAEQFAKGVQLHNEKDLT E K T A E Q 2 0 0 2 0 0 2 0 0 0 2 1 0 0 1 1 3 0 1 2 0 0 17 1 1 3 1850.9149 P0AA43 P0AA43 130 146 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 1.607E-07 91.914 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 119300000 4173300 4535900 13553000 17510000 14094000 21635000 17167000 26634000 2454 183 2647 14449;14450;14451;14452;14453;14454;14455;14456;14457 11010;11011;11012;11013;11014;11015;11016 11012 7 64122000 69172000 115160000 132750000 216990000 217390000 132120000 152850000 KTYLVTLESPVADDTAEQFAKGVQLHNE GQWSHRITSPRHHCEKTYLVTLESPVADDT DTAEQFAKGVQLHNEKDLTKPAVLEVITPT E K T N E K 3 0 1 2 0 2 3 1 1 0 3 2 0 1 1 1 3 0 1 3 0 0 28 2 2 4 3102.551 P0AA43 P0AA43 130 157 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3;4 1.5668E-158 192.18 By MS/MS By MS/MS 2 1 211600000 0 0 0 0 90172000 121420000 0 0 2455 183 2648 14458;14459;14460 11017;11018;11019;11020;11021 11021 5 0 0 0 0 1388300000 1840400000 0 0 KVAEFFGK VILVGGQTRMPMVQKKVAEFFGKEPRKDVN RMPMVQKKVAEFFGKEPRKDVNPDEAVAIG K K V G K E 1 0 0 0 0 0 1 1 0 0 0 2 0 2 0 0 0 0 0 1 0 0 8 1 1 1 924.5069 P0A6Y8 P0A6Y8 352 359 dnaK Chaperone protein DnaK yes yes 2 2.9157E-25 148.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 191700000 53168000 50448000 0 0 47284000 40802000 0 0 2456 86 2649 14461;14462;14463;14464 11022;11023;11024;11025 11025 4 53168000 51638000 0 0 57039000 45200000 0 0 KVAEFFGKEPR VILVGGQTRMPMVQKKVAEFFGKEPRKDVN MVQKKVAEFFGKEPRKDVNPDEAVAIGAAV K K V P R K 1 1 0 0 0 0 2 1 0 0 0 2 0 2 1 0 0 0 0 1 0 0 11 2 2 2 1306.7034 P0A6Y8 P0A6Y8 352 362 dnaK Chaperone protein DnaK yes yes 2;3 8.2634E-12 102.97 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 188100000 59945000 58928000 0 0 32635000 36589000 0 0 2457 86 2650 14465;14466;14467;14468;14469;14470;14471;14472 11026;11027;11028;11029;11030;11031;11032 11030 4 59945000 60318000 0 0 39367000 40532000 0 0 KVAQAKSPHVAALGSE HWKIEYTESTSAAMEKVAQAKSPHVAALGS VAQAKSPHVAALGSEAGGTLYGLQVLERIE E K V S E A 4 0 0 0 0 1 1 1 1 0 1 2 0 0 1 2 0 0 0 2 0 0 16 2 0 5 1591.8682 P0A9J8 P0A9J8 240 255 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 3 1.407E-15 69.729 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 338960000 31442000 21642000 44964000 56032000 12057000 13495000 71628000 87696000 2458 166 2651 14473;14474;14475;14476;14477;14478;14479;14480 11033;11034;11035;11036 11036 4 483100000 330050000 382060000 424810000 185630000 204540000 551260000 503270000 KVAQAKSPHVAALGSEAGGTLYGLQVLE HWKIEYTESTSAAMEKVAQAKSPHVAALGS GSEAGGTLYGLQVLERIEANQRQNFTRFVV E K V L E R 5 0 0 0 0 2 2 4 1 0 4 2 0 0 1 2 1 0 1 3 0 0 28 2 1 6 2793.5025 P0A9J8 P0A9J8 240 267 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 3;4 3.0939E-22 92.147 By matching By matching By MS/MS By MS/MS By matching 1 1 2 2 1 51384000 521970 833310 0 0 27145000 21393000 0 1489500 2459 166 2652 14481;14482;14483;14484;14485;14486;14487 11037;11038;11039;11040;11041 11040 5 8020000 12708000 0 0 417930000 324250000 0 8547800 KVDYSTFLQEVNNDQVR MSVFQSFGPSESNGRKVDYSTFLQEVNNDQ DYSTFLQEVNNDQVREARINGREINVTKKD R K V V R E 0 1 2 2 0 2 1 0 0 0 1 1 0 1 0 1 1 0 1 3 0 0 17 1 1 0 2054.0069 P0AAI3 P0AAI3 31 47 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 3 0.00035458 48.883 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29630000 7203800 5664200 0 0 7384000 9377500 0 0 2460 185 2653 14488;14489;14490;14491 11042;11043;11044 11043 3 7203800 5797900 0 0 8907400 10388000 0 0 KVEGGVVDLNTLKA RKAAITAEIRLSDLAKVEGGVVDLNTLKAA AKVEGGVVDLNTLKAANIIGIQIEFAKVIL A K V K A A 1 0 1 1 0 0 1 2 0 0 2 2 0 0 0 0 1 0 0 3 0 0 14 2 1 0 1441.814 P02413 P02413 84 97 rplO 50S ribosomal protein L15 yes yes 3 0.00029986 63.894 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 38180000 4050900 5440400 1614200 0 8074300 19000000 0 0 2461 37 2654 14492;14493;14494;14495;14496 11045;11046;11047 11047 3 24453000 32561000 13716000 0 11495000 27084000 0 0 KVEGGVVDLNTLKAA RKAAITAEIRLSDLAKVEGGVVDLNTLKAA KVEGGVVDLNTLKAANIIGIQIEFAKVILA A K V A A N 2 0 1 1 0 0 1 2 0 0 2 2 0 0 0 0 1 0 0 3 0 0 15 2 1 1 1512.8512 P02413 P02413 84 98 rplO 50S ribosomal protein L15 yes yes 2;3 9.2321E-33 147.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 870640000 79881000 79427000 0 0 147130000 564200000 0 0 2462 37 2655 14497;14498;14499;14500;14501;14502;14503;14504 11048;11049;11050;11051;11052;11053;11054;11055 11055 8 482200000 475370000 0 0 209470000 804270000 0 0 KVEIIVGDK AILVRNIIQLLREGKKVEIIVGDKTANDFY LLREGKKVEIIVGDKTANDFYIPEDEPFKI K K V D K T 0 0 0 1 0 0 1 1 0 2 0 2 0 0 0 0 0 0 0 2 0 0 9 1 1 0 999.59645 P23830 P23830 293 301 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.0022395 71.349 By MS/MS By MS/MS By MS/MS 1 1 1 16171000 0 6761700 0 0 4425700 4983400 0 0 2463 304 2656 14505;14506;14507 11056;11057;11058 11056 3 0 6921200 0 0 5338700 5520400 0 0 KVIGIGSPR EQAMQGAADILRQSKKVIGIGSPRASVESN ILRQSKKVIGIGSPRASVESNFALRELVGE K K V P R A 0 1 0 0 0 0 0 2 0 2 0 1 0 0 1 1 0 0 0 1 0 0 9 1 0 1 925.5709 P33602 P33602 311 319 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0022156 78.149 By MS/MS By matching By matching By matching 1 1 1 1 174710000 49920000 57038000 0 0 33064000 34692000 0 0 2464 345 2657 14508;14509;14510;14511 11059 11059 1 49920000 58384000 0 0 39885000 38431000 0 0 KVIYLSPQGRKLDQA RDAIHAAKAAAGEGAKVIYLSPQGRKLDQA KVIYLSPQGRKLDQAGVSELATNQKLILVC A K V Q A G 1 1 0 1 0 2 0 1 0 1 2 2 0 0 1 1 0 0 1 1 0 0 15 3 0 1 1714.973 P0A873 P0A873 83 97 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 3 0.0053486 44.601 By MS/MS By MS/MS 1 1 18115000 0 0 0 0 12564000 5550700 0 0 2465 140 2658 14512;14513 11060 11060 1 0 0 0 0 17888000 7912500 0 0 KVLESAIANAEHNDGADIDDLK DILTYTNKKAAVLVKKVLESAIANAEHNDG ANAEHNDGADIDDLKVTKIFVDEGPSMKRI K K V L K V 4 0 2 4 0 0 2 1 1 2 2 2 0 0 0 1 0 0 0 1 0 0 22 1 2 4 2337.1448 P61175 P61175 49 70 rplV 50S ribosomal protein L22 yes yes 3 1.8069E-05 46.099 By MS/MS By MS/MS 1 1 12475000 0 0 0 0 0 12475000 0 0 2466 385 2659 14514;14515 11061;11062 11062 2 0 0 0 0 0 13820000 0 0 KVMPFFE LMTKFEYWAMPHKDEKVMPFFEQHKSLFRN WAMPHKDEKVMPFFEQHKSLFRNPKKLADV E K V F E Q 0 0 0 0 0 0 1 0 0 0 0 1 1 2 1 0 0 0 0 1 0 0 7 1 0 1 896.44661 P31658 P31658 115 121 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 0.020721 52.683 By MS/MS By MS/MS By MS/MS 1 1 1 14840000 0 0 0 3567800 0 0 4139100 7132900 2467 335 2660 14516;14517;14518 11063 11063 1 0 0 0 27050000 0 0 31855000 40934000 KVPIVSK TFHALALHIIQQGSKKVPIVSKLENDTAAR HIIQQGSKKVPIVSKLENDTAARHELFIAE K K V S K L 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 0 0 7 1 0 1 769.50617 P15038 P15038 289 295 helD Helicase IV yes yes 2 0.0042204 67.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 102950000 26155000 37943000 0 0 18888000 19962000 0 0 2468 281 2661 14519;14520;14521;14522 11064;11065;11066;11067 11067 3 26155000 38838000 0 0 22784000 22113000 0 0 KVPVMIHR PSRLSASYVGEDNERKVPVMIHRAILGSME VGEDNERKVPVMIHRAILGSMERFIGILTE R K V H R A 0 1 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 2 0 0 8 1 0 1 978.57969 P0A8M3 P0A8M3 505 512 thrS Threonine--tRNA ligase yes yes 2 0.0097425 53.554 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 12249000 2919300 2822800 0 0 2628500 3878200 0 0 2469 147 2662 14523;14524;14525;14526 11068 11068 1 2919300 2889400 0 0 3170700 4296200 0 0 KVQIFEMMDAK YKATCLLDRKTVALKKVQIFEMMDAKARQD VALKKVQIFEMMDAKARQDCVKEIGLLKQL K K V A K A 1 0 0 1 0 1 1 0 0 1 0 2 2 1 0 0 0 0 0 1 0 0 11 1 1 1 1338.6676 GST-Nek6 GST-Nek6 306 316 yes yes 2;3 4.1886E-163 207.29 By MS/MS By MS/MS 6 5 293380000 0 0 0 0 118700000 174680000 0 0 2470 23 2663;2664 14527;14528;14529;14530;14531;14532;14533;14534;14535;14536;14537 11069;11070;11071;11072;11073;11074;11075;11076 11073 33;34 8 0 0 0 0 143560000 193730000 0 0 KVSQALDILTYTNKK SAQKVRLVADLIRGKKVSQALDILTYTNKK KVSQALDILTYTNKKAAVLVKKVLESAIAN K K V K K A 1 0 1 1 0 1 0 0 0 1 2 3 0 0 0 1 2 0 1 1 0 0 15 2 0 1 1720.9723 P61175 P61175 28 42 rplV 50S ribosomal protein L22 yes yes 3 0.0011547 52.823 By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 29910000 11170000 7474300 0 0 5389800 5875600 0 0 2471 385 2665 14538;14539;14540;14541;14542 11077 11077 1 11170000 7650700 0 0 6501800 6685100 0 0 KVVADIAGVPAQINIAEVR GIVIGKKGEDVEKLRKVVADIAGVPAQINI DIAGVPAQINIAEVRKPELDAKLVADSITS R K V V R K 4 1 1 1 0 1 1 1 0 3 0 1 0 0 1 0 0 0 0 4 0 0 19 1 1 5 1962.1262 P0A7V3 P0A7V3 89 107 rpsC 30S ribosomal protein S3 yes yes 2;3 3.2523E-31 121.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 124700000 35878000 18895000 0 0 37162000 32767000 0 0 2472 129 2666 14543;14544;14545;14546;14547;14548 11078;11079;11080;11081;11082 11082 4 35878000 19341000 0 0 44829000 36298000 0 0 KVYAAIEAGDK KHNASRRSMMRTFIKKVYAAIEAGDKAAAQ TFIKKVYAAIEAGDKAAAQKAFNEMQPIVD K K V D K A 3 0 0 1 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1 1 0 0 11 1 1 3 1163.6186 P0A7U7 P0A7U7 34 44 rpsT 30S ribosomal protein S20 yes yes 2 0.00098076 68.893 By MS/MS By MS/MS By MS/MS 1 1 1 14723000 5692700 5578400 0 0 0 3451700 0 0 2473 127 2667 14549;14550;14551 11083;11084;11085 11084 3 5692700 5710000 0 0 0 3823700 0 0 KYEDEINK SELNNMQDLVEDYKKKYEDEINKRTAAEND LVEDYKKKYEDEINKRTAAENDFVTLKKDV K K Y N K R 0 0 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 8 1 2 0 1037.5029 CON__P35908v2;CON__P35908 CON__P35908v2 267 274 no no 2 0.0027087 80.165 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19843000 3207400 2840400 0 0 5878400 7917000 0 0 + 2474 16 2668 14552;14553;14554;14555 11086;11087;11088 11088 3 3207400 2907500 0 0 7091200 8770300 0 0 KYEDEINKR SELNNMQDLVEDYKKKYEDEINKRTAAEND VEDYKKKYEDEINKRTAAENDFVTLKKDVD K K Y K R T 0 1 1 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 2 0 1193.6041 CON__P35908v2;CON__P35908 CON__P35908v2 267 275 no no 2;3 2.6747E-37 144.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 417490000 113130000 8752000 0 0 179080000 116520000 0 0 + 2475 16 2669 14556;14557;14558;14559;14560;14561;14562;14563;14564 11089;11090;11091;11092;11093;11094;11095;11096 11096 8 113130000 9450800 0 0 216030000 129080000 0 0 KYRGQGLARQLVYE EDLQWVGMAPLAVDEKYRGQGLARQLVYEG EKYRGQGLARQLVYEGLDSLNEFGYAAVVT E K Y Y E G 1 2 0 0 0 2 1 2 0 0 2 1 0 0 0 0 0 0 2 1 0 0 14 3 0 1 1679.9107 P63417 P63417 82 95 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 3 0.0010379 54.343 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 77594000 5569400 7499400 9199700 9470700 4470400 4576200 13285000 23522000 2476 394 2670 14565;14566;14567;14568;14569;14570;14571;14572 11097;11098 11097 2 85573000 114370000 78168000 71802000 68826000 69359000 102250000 134990000 LAADDFR TTDNANILLQIDNARLAADDFRLKYENEVA LLQIDNARLAADDFRLKYENEVALRQSVEA R L A F R L 2 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 0 2 806.39227 CON__P02533;CON__Q6IFX2;CON__A2A4G1;CON__P19012;CON__Q3ZAW8;CON__Q9Z2K1;CON__P08727;CON__P05784;CON__Q14532;CON__Q92764;CON__A2AB72;CON__O76015;CON__Q9UE12;CON__O76013;CON__Q15323;CON__O76014;CON__A2A5Y0;CON__Q14525;CON__REFSEQ:XP_986630;CON__Q497I4;CON__P08779;CON__P13645;CON__P02535-1;CON__Q7Z3Y7;CON__Q148H6 CON__P13645 229 235 no no 2 2.2225E-34 160.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1259500000 140800000 200480000 0 0 452520000 465720000 0 0 + 2477 12;4;10 2671 14573;14574;14575;14576;14577;14578 11099;11100;11101;11102 11102 4 140800000 205220000 0 0 545880000 515910000 0 0 LAAEEQAQR KKRTFVKRDPQEAERLAAEEQAQREAEEQA PQEAERLAAEEQAQREAEEQARREAEESAK R L A Q R E 3 1 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9 0 2 3 1014.5094 P0A705 P0A705 102 110 infB Translation initiation factor IF-2 yes yes 2 0.0053376 56.721 By MS/MS By MS/MS By MS/MS 1 1 1 14304000 0 5413000 0 0 4377000 4514300 0 0 2478 90 2672 14579;14580;14581 11103 11103 1 0 5540700 0 0 5280000 5000900 0 0 LAAGLNSENALSNEAMER AGSIQTLTRIKRKVRLAAGLNSENALSNEA GLNSENALSNEAMERGWQCLRLFAERLQDI R L A E R G 4 1 3 0 0 0 3 1 0 0 3 0 1 0 0 2 0 0 0 0 0 0 18 0 3 4 1888.8949 P25552 P25552 42 59 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 0 343.87 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 302680000 79563000 70041000 0 0 67977000 85093000 0 0 2479 316 2673;2674 14582;14583;14584;14585;14586;14587;14588;14589 11104;11105;11106;11107;11108;11109;11110;11111 11108 263 8 79563000 71695000 0 0 82001000 94264000 0 0 LAAITAQDSQR RRHSTRVHNPAVEKRLAAITAQDSQRANVY VEKRLAAITAQDSQRANVYEVRAEAQRARF R L A Q R A 3 1 0 1 0 2 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 11 0 0 3 1172.6149 P25665 P25665 396 406 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase yes yes 2 0.0014615 64.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4981800 1760900 1609300 0 0 0 1611600 0 0 2480 317 2675 14590;14591;14592;14593 11112;11113;11114;11115 11115 1 1760900 1647300 0 0 0 1785300 0 0 LAALVAQQRVVRE GVAGTDFMLKGETDELAALVAQQRVVREAT DELAALVAQQRVVREATIDVNALAAKQPVT E L A R E A 3 2 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 0 0 3 0 0 13 2 0 3 1451.8572 P0ADY1 P0ADY1 183 195 ppiD Peptidyl-prolyl cis-trans isomerase D yes yes 3 0.00013263 57.802 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 23840000 0 0 7296500 0 0 0 7382900 9160600 2481 227 2676 14594;14595;14596;14597 11116;11117 11116 2 0 0 61997000 0 0 0 56820000 52571000 LADAPQFK GSDARGLCTLPGLEKLADAPQFKFKEIRHV TLPGLEKLADAPQFKFKEIRHVGPDVCLHL K L A F K F 2 0 0 1 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 8 0 0 3 888.47052 P25539 P25539 342 349 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 0.0014233 77.741 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2482 315 2677 14598;14599 11118;11119 11119 2 0 0 0 0 0 0 0 0 LADCQERDPALSELYLVEGDSAGGSAK TRRKGALDLAGLPGKLADCQERDPALSELY ELYLVEGDSAGGSAKQGRNRKNQAILPLKG K L A A K Q 4 1 0 3 1 1 3 3 0 0 4 1 0 0 1 3 0 0 1 1 0 0 27 1 3 5 2850.3342 P0AES6 P0AES6 407 433 gyrB DNA gyrase subunit B yes yes 3 8.5003E-43 112.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 68322000 13678000 19577000 0 0 14922000 20145000 0 0 2483 239 2678 14600;14601;14602;14603 11120;11121;11122;11123 11121 4 13678000 20039000 0 0 18000000 22316000 0 0 LADDALNGVTGLVEYHEHFNR RCRWPGTESAFQVHRLADDALNGVTGLVEY NGVTGLVEYHEHFNRF______________ R L A N R F 2 1 2 2 0 0 2 2 2 0 3 0 0 1 0 0 1 0 1 2 0 0 21 0 2 2 2369.14 P63417 P63417 146 166 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 4 0.0020448 32.156 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18023000 2871300 4602200 0 0 3911700 6637700 0 0 2484 394 2679 14604;14605;14606;14607 11124;11125 11124 2 2871300 4710800 0 0 4718700 7353000 0 0 LADDALNGVTGLVEYHEHFNRF RCRWPGTESAFQVHRLADDALNGVTGLVEY GVTGLVEYHEHFNRF_______________ R L A R F - 2 1 2 2 0 0 2 2 2 0 3 0 0 2 0 0 1 0 1 2 0 0 22 1 2 2 2516.2084 P63417 P63417 146 167 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 4 0.0025299 32.484 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34405000 8499400 9034900 0 0 9110700 7760400 0 0 2485 394 2680 14608;14609;14610;14611 11126;11127 11126 2 8499400 9248200 0 0 10990000 8596800 0 0 LADDVGIWPLVVIR RVMIDDSSVVIGDVRLADDVGIWPLVVIRG RLADDVGIWPLVVIRGDVHYVQIGARTNIQ R L A I R G 1 1 0 2 0 0 0 1 0 2 2 0 0 0 1 0 0 1 0 3 0 0 14 0 0 2 1564.8977 P0A9W9 P0A9W9 33 46 yrdA Protein YrdA yes yes 2 3.0968E-30 166.97 By MS/MS By MS/MS By MS/MS 1 1 1 240490000 0 55154000 0 0 102910000 82425000 0 0 2486 179 2681 14612;14613;14614 11128;11129;11130;11131 11131 4 0 56456000 0 0 124140000 91309000 0 0 LADEVDESAK KPFQSVSKVDESLEKLADEVDESAKEAEKA ESLEKLADEVDESAKEAEKALTPFIDRVKA K L A A K E 2 0 0 2 0 0 2 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 2 2 1075.5033 P0A6Z3 P0A6Z3 493 502 htpG Chaperone protein HtpG yes yes 2 1.4544E-20 138.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62896000 11657000 21359000 0 0 16462000 13419000 0 0 2487 88 2682 14615;14616;14617;14618 11132;11133;11134;11135;11136 11132 5 11657000 21863000 0 0 19858000 14865000 0 0 LADEVDESAKEAEK KPFQSVSKVDESLEKLADEVDESAKEAEKA KLADEVDESAKEAEKALTPFIDRVKALLGE K L A E K A 3 0 0 2 0 0 4 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 14 1 4 3 1532.7206 P0A6Z3 P0A6Z3 493 506 htpG Chaperone protein HtpG yes yes 2;3 5.646E-77 191.29 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 149130000 46685000 52898000 0 0 25904000 23644000 0 0 2488 88 2683 14619;14620;14621;14622;14623;14624;14625;14626 11137;11138;11139;11140;11141;11142;11143;11144 11140 8 46685000 54146000 0 0 31248000 26192000 0 0 LADKYFAKRA MAKQSMKAREVKRVALADKYFAKRAELKAI VKRVALADKYFAKRAELKAIISDVNASDED A L A R A E 3 1 0 1 0 0 0 0 0 0 1 2 0 1 0 0 0 0 1 0 0 0 10 3 0 2 1181.6557 P0AG59 P0AG59 16 25 rpsN 30S ribosomal protein S14 yes yes 3 0.00019155 60.518 By MS/MS 1 0 0 0 0 0 0 0 0 0 2489 260 2684 14627 11145 11145 1 0 0 0 0 0 0 0 0 LADLRGQNEDQNVGIK VVAGGGVALIRVASKLADLRGQNEDQNVGI ADLRGQNEDQNVGIKVALRAMEAPLRQIVL K L A I K V 1 1 2 2 0 2 1 2 0 1 2 1 0 0 0 0 0 0 0 1 0 0 16 1 1 1 1768.9068 P0A6F5 P0A6F5 426 441 groL 60 kDa chaperonin yes yes 3 1.7909E-36 139.49 By MS/MS By MS/MS By matching By matching 1 1 1 1 106290000 49419000 44652000 0 0 6082400 6138900 0 0 2490 68 2685 14628;14629;14630;14631 11146;11147;11148 11148 3 49419000 45706000 0 0 7337200 6800500 0 0 LADQHQVIVLSK LIIGSGAAGLSLALRLADQHQVIVLSKGPV ALRLADQHQVIVLSKGPVTEGSTFYAQGGI R L A S K G 1 0 0 1 0 2 0 0 1 1 2 1 0 0 0 1 0 0 0 2 0 0 12 0 0 1 1349.7667 P10902 P10902 27 38 nadB L-aspartate oxidase yes yes 2;3 5.5033E-46 141.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 327250000 67182000 107560000 0 0 71640000 80865000 0 0 2491 274 2686 14632;14633;14634;14635;14636;14637;14638;14639 11149;11150;11151;11152;11153;11154;11155;11156 11153 8 67182000 110100000 0 0 86420000 89580000 0 0 LADSLKP PAKRNEQDQKQLIVPLADSLKPGTYTVDWH DQKQLIVPLADSLKPGTYTVDWHVVSVDGH P L A K P G 1 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 7 1 0 1 742.4225 P0AA57 P0AA57 92 98 yobA Protein YobA yes yes 2 0.0037344 73.039 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 183030000 32801000 27196000 0 0 0 121100000 1934200 0 2492 184 2687 14640;14641;14642;14643 11157 11157 1 198000000 162770000 0 0 0 172630000 14886000 0 LADYYAENR DRLVVRLVHDRDAWRLADYYAENRHFLKPW DRDAWRLADYYAENRHFLKPWEPVRDESHC R L A N R H 2 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 9 0 1 2 1113.5091 P0A948 P0A948 31 39 rimJ Ribosomal-protein-alanine acetyltransferase yes yes 2 0.00095131 91.069 By matching By MS/MS By matching By MS/MS 1 1 1 1 34251000 8918500 11331000 0 0 9843500 4157800 0 0 2493 159 2688 14644;14645;14646;14647 11158;11159 11158 2 8918500 11599000 0 0 11874000 4605900 0 0 LAEALSMLK RSSQRHLNNRGAQQKLAEALSMLKGSTVEL RGAQQKLAEALSMLKGSTVELTIVEDDNPA K L A L K G 2 0 0 0 0 0 1 0 0 0 3 1 1 0 0 1 0 0 0 0 0 0 9 0 1 2 974.54705 P06710 P06710 572 580 dnaX DNA polymerase III subunit tau yes yes 2 0.00048696 61.999 By MS/MS 1 0 0 0 0 0 0 0 0 0 2494 51 2689 14648 11160 11160 1 0 0 0 0 0 0 0 0 LAEAYGHVGIQISHPHELESK RHSQSYMQSLPDFVRLAEAYGHVGIQISHP HVGIQISHPHELESKLSEALEQVRNNRLVF R L A S K L 2 0 0 0 0 1 3 2 3 2 2 1 0 0 1 2 0 0 1 1 0 0 21 0 3 3 2314.1706 P00893 P00893 507 527 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 3;4 3.6181E-20 94.358 By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 84023000 18661000 10879000 0 0 32287000 22196000 0 0 2495 29 2690 14649;14650;14651;14652;14653;14654 11161;11162;11163;11164 11162 4 18661000 11136000 0 0 38948000 24588000 0 0 LAEDFSDKHHA SRIEQMLSQDKRIEALAEDFSDKHHALFLG RIEALAEDFSDKHHALFLGRGDQYPIALEG A L A H A L 2 0 0 2 0 0 1 0 2 0 1 1 0 1 0 1 0 0 0 0 0 0 11 1 1 1 1268.5786 P17169 P17169 458 468 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 0.00032616 81.865 By MS/MS By MS/MS By MS/MS 2 2 1 19900000 5402800 5045500 0 0 0 9452000 0 0 2496 288 2691 14655;14656;14657;14658;14659 11165;11166 11166 2 45651000 51794000 0 0 0 13474000 0 0 LAEDFSDKHHALFLGRGDQYP SRIEQMLSQDKRIEALAEDFSDKHHALFLG DKHHALFLGRGDQYPIALEGALKLKEISYI A L A Y P I 2 1 0 3 0 1 1 2 2 0 3 1 0 2 1 1 0 0 1 0 0 0 21 2 1 2 2415.1608 P17169 P17169 458 478 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 7.1044E-80 155.93 By MS/MS By MS/MS 1 1 25195000 0 0 0 0 7542100 17653000 0 0 2497 288 2692 14660;14661 11167;11168;11169 11167 3 0 0 0 0 10738000 25164000 0 0 LAEEIIYGPEHVSTGASNDIK RQKLESQISTLYGGRLAEEIIYGPEHVSTG YGPEHVSTGASNDIKVATNLARNMVTQWGF R L A I K V 2 0 1 1 0 0 3 2 1 3 1 1 0 0 1 2 1 0 1 1 0 0 21 0 3 3 2242.1117 P0AAI3 P0AAI3 474 494 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 3 9.1559E-08 69.122 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37432000 8713400 9400300 0 0 8000500 11318000 0 0 2498 185 2693 14662;14663;14664;14665 11170;11171;11172;11173 11172 4 8713400 9622200 0 0 9651000 12538000 0 0 LAEKLLHNP QNLLFSATFSDDIKALAEKLLHNPLEIEVA SDDIKALAEKLLHNPLEIEVARRNTASDQV A L A N P L 1 0 1 0 0 0 1 0 1 0 3 1 0 0 1 0 0 0 0 0 0 0 9 1 1 1 1033.592 P25888 P25888 197 205 rhlE ATP-dependent RNA helicase RhlE yes yes 2 9.6783E-07 115.7 By MS/MS By MS/MS By MS/MS 1 1 1 19644000 3097000 4115900 0 0 0 12431000 0 0 2499 318 2694 14666;14667;14668 11174;11175 11175 2 18695000 24634000 0 0 0 17721000 0 0 LAELEEALQK AEQRGELALKDARNKLAELEEALQKAKQDM DARNKLAELEEALQKAKQDMARLLREYQEL K L A Q K A 2 0 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 3 2 1142.6183 CON__P13647 CON__P13647 432 441 yes yes 2 2.8101E-07 113.62 By matching By MS/MS 1 1 44410000 18765000 0 0 0 0 25645000 0 0 + 2500 13 2695 14669;14670 11176 11176 1 18765000 0 0 0 0 28409000 0 0 LAENLRK QKVDLSTFSDEEVMRLAENLRKGMPIATPV FSDEEVMRLAENLRKGMPIATPVFDGAKEA R L A R K G 1 1 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 1 1 1 842.4974 P0A8V2 P0A8V2 1172 1178 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.019712 48.174 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 12561000 4824100 4092700 0 0 1597900 2045800 0 0 2501 154 2696 14671;14672;14673;14674 11177 11177 1 4824100 4189300 0 0 1927500 2266300 0 0 LAETQGKLE SKHRDLTALCKEYDELAETQGKLEEKLQEL CKEYDELAETQGKLEEKLQELEANPPSDVY E L A L E E 1 0 0 0 0 1 2 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 1 1 1 987.52368 LSD1-FL-His LSD1-FL-His 499 507 yes yes 2 0.0003199 101.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 896740000 9077500 11874000 235840000 280420000 17207000 3561900 0 338770000 2502 24 2697 14675;14676;14677;14678;14679;14680;14681 11178;11179;11180 11178 3 139470000 181080000 2003900000 2126000000 264920000 53986000 0 1944100000 LAETQGKLEE SKHRDLTALCKEYDELAETQGKLEEKLQEL KEYDELAETQGKLEEKLQELEANPPSDVYL E L A E E K 1 0 0 0 0 1 3 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 10 1 2 1 1116.5663 LSD1-FL-His LSD1-FL-His 499 508 yes yes 2 4.7204E-26 160.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 4 1 2 873300000 36994000 30824000 0 0 37294000 44834000 0 723350000 2503 24 2698;2699 14682;14683;14684;14685;14686;14687;14688;14689;14690;14691;14692;14693;14694;14695;14696;14697;14698 11181;11182;11183;11184;11185;11186;11187 11183 42 4 300730000 240940000 0 0 384240000 374580000 0 4151200000 LAEVLAAANAR NIEFFEARRAELEAKLAEVLAAANARAEKI LEAKLAEVLAAANARAEKINALETVTIASK K L A A R A 5 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1 5 1097.6193 P0A7R1 P0A7R1 58 68 rplI 50S ribosomal protein L9 yes yes 2 2.5497E-17 133.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 86286000 16209000 14896000 8016500 7989100 10307000 12702000 7073300 9093200 2504 119 2700 14699;14700;14701;14702;14703;14704;14705;14706;14707 11188;11189;11190;11191;11192 11189 5 16209000 15248000 68115000 60570000 12434000 14696000 54437000 52185000 LAFAGLK NNSEGADAQTGNKTRLAFAGLKYADVGSFD AQTGNKTRLAFAGLKYADVGSFDYGRNYGV R L A L K Y 2 0 0 0 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 7 0 0 2 718.43776 P02931;P21420;P77747 P02931 105 111 ompF;nmpC;ompN Outer membrane protein F;Putative outer membrane porin protein NmpC;Outer membrane protein N no no 2 0.0024349 80.377 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 80696000 10742000 9395700 0 0 37095000 22674000 789090 0 2505 38 2701 14708;14709;14710;14711;14712 11193;11194;11195;11196 11193 4 10742000 9617500 0 0 44748000 25118000 6073000 0 LAFALSK PRHNGAPAFSPDGSKLAFALSKTGSLNLYV AFSPDGSKLAFALSKTGSLNLYVMDLASGQ K L A S K T 2 0 0 0 0 0 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 7 0 0 2 748.44833 P0A855 P0A855 258 264 tolB Protein TolB yes yes 2 0.0058882 46.426 By MS/MS By matching By matching By MS/MS 1 1 1 1 9864300 0 3381800 0 0 2920700 3561900 0 0 2506 138 2702 14713;14714;14715;14716 11197;11198 11197 2 0 3461600 0 0 3523200 3945700 0 0 LAFDEFDELAGDR LARHPQRPYTLDYVRLAFDEFDELAGDRAY VRLAFDEFDELAGDRAYADDKAIVGGIARL R L A D R A 2 1 0 3 0 0 2 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 13 0 2 2 1496.6783 P0ABD5 P0ABD5 81 93 accA Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha yes yes 2 0.00020943 69.979 By MS/MS By MS/MS By MS/MS 1 1 1 6304300 0 3235900 0 0 3068400 0 0 0 2507 198 2703 14717;14718;14719 11199;11200;11201 11201 3 0 3312300 0 0 3701400 0 0 0 LAFEPGVIPELLK ISEPPSDFQVDRFDKLAFEPGVIPELLKLQ DKLAFEPGVIPELLKLQKAGYKLVMITNQD K L A L K L 1 0 0 0 0 0 2 1 0 1 3 1 0 1 2 0 0 0 0 1 0 0 13 0 2 3 1424.8279 P06987 P06987 30 42 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 2.1878E-11 116.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2458000000 605050000 596270000 0 0 485240000 771430000 0 0 2508 55 2704 14720;14721;14722;14723 11202;11203;11204;11205 11203 4 605050000 610350000 0 0 585350000 854570000 0 0 LAFNPSHLEIVSP FSSDFQTDGGLVHLALAFNPSHLEIVSPVV LALAFNPSHLEIVSPVVIGSVRARLDRLDE A L A S P V 1 0 1 0 0 0 1 0 1 1 2 0 0 1 2 2 0 0 0 1 0 0 13 0 1 2 1422.7507 P0AFG3 P0AFG3 316 328 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 1.3096E-16 116.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9446700 241550 229760 0 0 2871000 6104300 0 0 2509 246 2705 14724;14725;14726;14727 11206 11206 1 1458100 1375100 0 0 4087500 8701700 0 0 LAGEGEAGEHGAPAGDLYVQVQVK SVKIPAGVDTGDRIRLAGEGEAGEHGAPAG HGAPAGDLYVQVQVKQHPIFEREGNNLYCE R L A V K Q 4 0 0 1 0 2 3 5 1 0 2 1 0 0 1 0 0 0 1 3 0 0 24 0 3 5 2394.1816 P08622 P08622 228 251 dnaJ Chaperone protein DnaJ yes yes 3 2.2431E-23 92.336 By matching By matching By MS/MS By MS/MS 1 1 1 1 27141000 2161900 6635700 0 0 9056500 9286800 0 0 2510 61 2706 14728;14729;14730;14731 11207;11208 11208 2 33218000 6792300 0 0 10925000 10288000 0 0 LAGGVAVIK TSDYDREKLQERVAKLAGGVAVIKVGAATE QERVAKLAGGVAVIKVGAATEVEMKEKKAR K L A I K V 2 0 0 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 2 0 0 9 0 0 2 826.52764 P0A6F5 P0A6F5 372 380 groL 60 kDa chaperonin yes yes 2 0.0013581 87.284 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1564400000 372520000 377730000 0 0 366820000 447310000 0 0 2511 68 2707 14732;14733;14734;14735 11209;11210;11211;11212 11210 4 372520000 386640000 0 0 442490000 495520000 0 0 LAGIANGGRGVDTTDA FKPAAIRGNASEIMALAGIANGGRGVDTTD AGIANGGRGVDTTDAAANAIPAAQTLARET A L A D A A 3 1 1 2 0 0 0 4 0 1 1 0 0 0 0 0 2 0 0 1 0 0 16 1 0 2 1486.7376 P76423 P76423 134 149 thiM Hydroxyethylthiazole kinase yes yes 2 6.5432E-28 113.22 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 26857000 4870600 4286000 0 0 1385700 16315000 0 0 2512 426 2708 14736;14737;14738;14739 11213;11214 11214 2 29401000 25652000 0 0 1972800 23257000 0 0 LAGLAQR TRKKSIDLEFIVWQRLAGLAQRRGKTLSET LEFIVWQRLAGLAQRRGKTLSETIVQLIED R L A Q R R 2 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 0 2 727.43407 P0A8N0 P0A8N0 104 110 matP Macrodomain Ter protein yes yes 2 9.2958E-18 143.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 72084000 18140000 24188000 0 0 17613000 12143000 0 0 2513 149 2709 14740;14741;14742;14743 11215;11216;11217;11218 11215 4 18140000 24759000 0 0 21246000 13452000 0 0 LAGVSVATVSR ______________________________ DVARLAGVSVATVSRVINNSPKASEASRLA R L A S R V 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 1 0 0 3 0 0 11 0 0 2 1058.6084 P03024 P03024 10 20 galR HTH-type transcriptional regulator GalR yes yes 2 3.4194E-05 98.048 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30531000 7327100 8801700 0 0 6086400 8316200 0 0 2514 42 2710 14744;14745;14746;14747 11219;11220;11221;11222 11219 4 7327100 9009400 0 0 7342100 9212500 0 0 LAIFHLR LISRDAPDYQYLAARLAIFHLRKKAYGQFE DYQYLAARLAIFHLRKKAYGQFEPPALYDH R L A L R K 1 1 0 0 0 0 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 0 7 0 0 1 868.52831 P00452;P00452-2 P00452 84 90 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 0.0041759 66.994 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16586000 3499400 4772800 0 0 3531700 4782400 0 0 2515 26 2711 14748;14749;14750;14751 11223;11224;11225;11226 11224 4 3499400 4885500 0 0 4260300 5297800 0 0 LAIIFASR AVPPRVAEQLCRLLRLAIIFASRRRDDLVP QLCRLLRLAIIFASRRRDDLVPEMTLQANH R L A S R R 2 1 0 0 0 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 8 0 0 2 889.53854 P25552 P25552 433 440 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 2.6481E-05 113.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 127560000 25850000 28294000 0 0 38243000 35169000 0 0 2516 316 2712 14752;14753;14754;14755 11227;11228;11229;11230 11230 4 25850000 28962000 0 0 46132000 38960000 0 0 LAKIKQKCPLYE GGNPMAVVSKQVNMELAKIKQKCPLYEANG NMELAKIKQKCPLYEANGQAVPKEKDEMVE E L A Y E A 1 0 0 0 1 1 1 0 0 1 2 3 0 0 1 0 0 0 1 0 0 0 12 3 0 2 1489.8327 LSD1-FL-His LSD1-FL-His 355 366 yes yes 2;3;4 5.8801E-24 160.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 3 2 3 3 2 3 40586000000 4372800000 2821400000 7714300000 9759500000 1829900000 1346400000 5267700000 7473700000 2517 24 2713 14756;14757;14758;14759;14760;14761;14762;14763;14764;14765;14766;14767;14768;14769;14770;14771;14772;14773;14774;14775;14776;14777;14778 11231;11232;11233;11234;11235;11236;11237;11238;11239;11240;11241;11242;11243;11244;11245 11238 15 67184000000 43027000000 65547000000 73992000000 28174000000 20407000000 40541000000 42890000000 LAKLSGDTLDGE FARTLERGLALLDEELAKLSGDTLDGETAF DEELAKLSGDTLDGETAFRLYDTYGFPVDL E L A G E T 1 0 0 2 0 0 1 2 0 0 3 1 0 0 0 1 1 0 0 0 0 0 12 1 0 1 1217.6139 P00957 P00957 382 393 alaS Alanine--tRNA ligase yes yes 2 0.0020058 56.563 By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 19385000 3163900 223110 0 0 0 1271800 5683600 9042300 2518 33 2714 14779;14780;14781;14782;14783;14784 11246 11246 1 47156000 1335300 0 0 0 19276000 43742000 51892000 LAKRGIE LLNDILPVYQQVLAELAKRGIEWVQIDEPA VYQQVLAELAKRGIEWVQIDEPALVLELPQ E L A I E W 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 2 0 1 785.47594 P25665 P25665 198 204 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase yes yes 2 0.0079863 50.966 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 5307900 0 0 0 0 1216700 1241000 2850200 0 2519 317 2715 14785;14786;14787;14788;14789 11247;11248 11248 2 0 0 0 0 5352500 1374700 21936000 0 LAKRISTVPE DEEYPNKVEMKRLQELAKRISTVPEAVEMQ KRLQELAKRISTVPEAVEMQSRVAKIYGDR E L A P E A 1 1 0 0 0 0 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 2 0 2 1112.6554 P0AFG3 P0AFG3 557 566 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 0.00028803 101.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 609470000 82313000 63883000 83081000 104760000 19379000 23358000 93062000 139630000 2520 246 2716 14790;14791;14792;14793;14794;14795;14796;14797;14798;14799;14800;14801;14802;14803;14804;14805 11249;11250;11251;11252;11253;11254 11250 6 1264700000 974230000 705930000 794260000 298370000 354030000 716230000 801320000 LAKRISTVPEAVE DEEYPNKVEMKRLQELAKRISTVPEAVEMQ QELAKRISTVPEAVEMQSRVAKIYGDRQAM E L A V E M 2 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 1 0 0 2 0 0 13 2 1 3 1411.8035 P0AFG3 P0AFG3 557 569 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 0.019317 28.956 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 2 2 2 1 2 2 57465000 4075900 5137100 9715600 9987800 2180100 2593100 10273000 13502000 2521 246 2717 14806;14807;14808;14809;14810;14811;14812;14813;14814;14815;14816;14817;14818;14819 11255;11256;11257;11258 11258 4 62626000 78342000 82552000 75723000 33565000 39302000 79061000 77487000 LALALADNRPLPE TVRYPIVTMATQAAELALALADNRPLPEIT AELALALADNRPLPEITNVFSPTLVRRHSV E L A P E I 3 1 1 1 0 0 1 0 0 0 4 0 0 0 2 0 0 0 0 0 0 0 13 1 0 5 1391.7773 P03024 P03024 302 314 galR HTH-type transcriptional regulator GalR yes yes 2 2.632E-10 96.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 28652000 1123300 1937900 8175600 5072100 0 0 5264200 7078400 2522 42 2718 14820;14821;14822;14823;14824;14825 11259;11260;11261;11262;11263;11264 11262 6 17259000 29554000 69467000 38455000 0 0 40515000 40622000 LALDLEIATYR LARLLRDYQELMNTKLALDLEIATYRTLLE MNTKLALDLEIATYRTLLEGEESRMSGECA K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1 2 1276.7027 CON__P04264 CON__P04264 473 483 yes yes 2 8.518E-12 123.88 By matching By MS/MS By MS/MS 1 2 1 20653000 0 1677300 0 0 9559400 9416600 0 0 + 2523 9 2719 14826;14827;14828;14829 11265;11266 11266 2 0 1716800 0 0 31500000 10431000 0 0 LALIDADMP IHAEAYAAGELKHGPLALIDADMPVIVVAP ELKHGPLALIDADMPVIVVAPNNELLEKLK P L A M P V 2 0 0 2 0 0 0 0 0 1 2 0 1 0 1 0 0 0 0 0 0 0 9 0 0 2 957.48412 P17169 P17169 508 516 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 1 0.0043079 72.234 By matching By matching By MS/MS By MS/MS 2 2 2 3 91090000 8298600 9934600 0 0 27767000 45089000 0 0 2524 288 2720;2721 14830;14831;14832;14833;14834;14835;14836;14837;14838 11267;11268;11269 11269 240 2 50095000 59459000 0 0 39532000 64274000 0 0 LALPKEKLQE RSILERDVRINSNEELALPKEKLQELHI__ NSNEELALPKEKLQELHI____________ E L A Q E L 1 0 0 0 0 1 2 0 0 0 3 2 0 0 1 0 0 0 0 0 0 0 10 2 1 2 1167.6863 P45578 P45578 159 168 luxS S-ribosylhomocysteine lyase yes yes 2;3 2.2716E-05 75.509 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 2 2 386650000 28552000 27373000 51110000 76621000 19317000 22750000 78185000 82740000 2525 370 2722 14839;14840;14841;14842;14843;14844;14845;14846;14847;14848;14849;14850;14851;14852;14853;14854;14855 11270;11271;11272;11273;11274;11275;11276 11271 7 438700000 417440000 434270000 580910000 297410000 332220000 601730000 474830000 LALVMAAFDTHPE GLGVDDAKHGFTVDELALVMAAFDTHPEAG DELALVMAAFDTHPEAGK____________ E L A P E A 3 0 0 1 0 0 1 0 1 0 2 0 1 1 1 0 1 0 0 1 0 0 13 0 0 4 1413.6962 P77567 P77567 266 278 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2 1.2472E-24 161.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 1 2 343470000 34068000 36901000 16933000 9826500 103860000 102580000 16452000 22855000 2526 436 2723;2724 14856;14857;14858;14859;14860;14861;14862;14863;14864;14865;14866;14867;14868;14869;14870 11277;11278;11279;11280;11281;11282;11283;11284;11285;11286;11287;11288 11288 336 12 523440000 562740000 143880000 74500000 1598900000 1554800000 126620000 131160000 LALVMAAFDTHPEAGK GLGVDDAKHGFTVDELALVMAAFDTHPEAG ALVMAAFDTHPEAGK_______________ E L A G K - 4 0 0 1 0 0 1 1 1 0 2 1 1 1 1 0 1 0 0 1 0 0 16 0 1 5 1669.8498 P77567 P77567 266 281 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2;3 2.1966E-23 103.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 3 3 1 2 185180000 8269900 11544000 2916600 4665000 75378000 73079000 3334000 5990700 2527 436 2725;2726 14871;14872;14873;14874;14875;14876;14877;14878;14879;14880;14881;14882;14883;14884;14885;14886 11289;11290;11291;11292;11293;11294;11295;11296;11297;11298;11299;11300 11300 336 12 127070000 176050000 24782000 35368000 1160500000 1107600000 25659000 34379000 LAMDVKEE NGQIFDHQARLHSFELAMDVKEELLG____ ARLHSFELAMDVKEELLG____________ E L A E E L 1 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 8 1 1 1 933.44773 P0ADV5 P0ADV5 325 332 yhbW Uncharacterized protein YhbW yes yes 2 0.00075374 98.997 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 1083600000 134740000 97302000 176320000 158120000 71515000 73322000 156170000 216080000 2528 226 2727;2728 14887;14888;14889;14890;14891;14892;14893;14894;14895;14896;14897;14898;14899;14900;14901;14902 11301;11302;11303;11304;11305;11306;11307;11308;11309 11302 204 8 2070200000 1483900000 1498200000 1198800000 1101000000 1111300000 1201900000 1240000000 LAMGEPISEIR MFGNGERPLVEVAHRLAMGEPISEIRDVRN VAHRLAMGEPISEIRDVRNTAIIVKEALPG R L A I R D 1 1 0 0 0 0 2 1 0 2 1 0 1 0 1 1 0 0 0 0 0 0 11 0 2 2 1214.6329 Q46861 Q46861 208 218 ygiQ UPF0313 protein YgiQ yes yes 2 0.00032845 72.325 By MS/MS By MS/MS By MS/MS 1 1 1 58799000 0 25712000 0 0 18799000 14288000 0 0 2529 441 2729 14903;14904;14905 11310;11311;11312 11311 3 0 26319000 0 0 22677000 15828000 0 0 LAMQRLKEA EEFKKDQGIDLRNDPLAMQRLKEAAEKAKI DLRNDPLAMQRLKEAAEKAKIELSSAQQTD P L A E A A 2 1 0 0 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 9 2 1 1 1058.5906 P0A6Y8 P0A6Y8 257 265 dnaK Chaperone protein DnaK yes yes 2;3 1.1996E-53 190.93 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 4 249180000 22459000 18823000 0 0 108180000 99724000 0 0 2530 86 2730;2731 14906;14907;14908;14909;14910;14911;14912;14913;14914;14915;14916;14917;14918;14919;14920 11313;11314;11315;11316;11317;11318;11319;11320;11321;11322 11320 91 9 135580000 112650000 0 0 153730000 142160000 0 0 LANAPFIK PTGVGKTEIARRLAKLANAPFIKVEATKFT IARRLAKLANAPFIKVEATKFTEVGYVGKE K L A I K V 2 0 1 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 8 0 0 3 872.51199 P0A6H5 P0A6H5 73 80 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0017817 65.803 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31461000 11248000 0 0 0 12241000 7971900 0 0 2531 71 2732 14921;14922;14923;14924 11323;11324;11325;11326 11324 4 11248000 0 0 0 14766000 8831100 0 0 LANEGFVAR EVAKIEGEISRIENKLANEGFVARAPEAVI SRIENKLANEGFVARAPEAVIAKEREKLEG K L A A R A 2 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1 2 975.51378 P07118 P07118 910 918 valS Valine--tRNA ligase yes yes 2 0.020085 49.833 By MS/MS By matching By matching 1 1 1 6992500 0 2439500 0 0 0 2470900 0 2082200 2532 57 2733 14925;14926;14927 11327 11327 0 0 2497100 0 0 0 2737200 0 11949000 LANELSDAAENK VEAARKRGDKSMALRLANELSDAAENKGTA ALRLANELSDAAENKGTAVKKREDVHRMAE R L A N K G 3 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 12 0 2 3 1273.615 P02359 P02359 120 131 rpsG 30S ribosomal protein S7 yes yes 2 6.5614E-46 160.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 80466000 18548000 13749000 0 0 27015000 21154000 0 0 2533 36 2734 14928;14929;14930;14931;14932 11328;11329;11330;11331 11331 4 18548000 14074000 0 0 32803000 23434000 0 0 LANELSDAAENKGTAVK VEAARKRGDKSMALRLANELSDAAENKGTA NELSDAAENKGTAVKKREDVHRMAEANKAF R L A V K K 4 0 2 1 0 0 2 1 0 0 2 2 0 0 0 1 1 0 0 1 0 0 17 1 2 4 1729.8846 P02359 P02359 120 136 rpsG 30S ribosomal protein S7 yes yes 3 2.047E-07 74.786 By MS/MS By MS/MS By matching By matching 1 1 1 1 18324000 8083500 7414300 0 0 1616800 1209000 0 0 2534 36 2735 14933;14934;14935;14936 11332;11333 11332 2 8083500 7589200 0 0 1950400 1339300 0 0 LANGTLKQE DVTQSSNDFLRLKQELANGTLKQENGKAKV LRLKQELANGTLKQENGKAKVSLITSDGIK E L A Q E N 1 0 1 0 0 1 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 1 0 1 972.52401 P0AE06 P0AE06 230 238 acrA Multidrug efflux pump subunit AcrA yes yes 2 0.020462 43.808 By matching By MS/MS By MS/MS 1 1 1 9413100 0 0 0 2354600 0 0 2733400 4325200 2535 232 2736 14937;14938;14939 11334 11334 0 0 0 0 17851000 0 0 21037000 24822000 LANLPLVR SNSIVASWSWYSHQRLANLPLVRIGEDAHR SWYSHQRLANLPLVRIGEDAHRNPLMQNEK R L A V R I 1 1 1 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 8 0 0 2 894.56509 P30845 P30845 211 218 eptA Phosphoethanolamine transferase EptA yes yes 2 0.000477 102.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19427000 4363300 3969800 0 0 6558200 4535300 0 0 2536 334 2737 14940;14941;14942;14943 11335;11336;11337 11335 3 4363300 4063500 0 0 7911200 5024100 0 0 LAPRDIVARAIDHE PDGTRFMPDFDERGELAPRDIVARAIDHEM ELAPRDIVARAIDHEMKRLGADCMFLDISH E L A H E M 3 2 0 2 0 0 1 0 1 2 1 0 0 0 1 0 0 0 0 1 0 0 14 2 0 4 1574.8529 P10902 P10902 287 300 nadB L-aspartate oxidase yes yes 3 0.0013805 61.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 117150000 13110000 15395000 0 28323000 17713000 12518000 0 30090000 2537 274 2738 14944;14945;14946;14947;14948;14949 11338;11339;11340;11341 11339 4 201430000 234770000 0 214730000 272700000 189730000 0 172680000 LAQANLK PIAIQQAVMRRLREKLAQANLKLGRNYPEP VMRRLREKLAQANLKLGRNYPEPKLSYTQR K L A L K L 2 0 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 0 0 2 756.44939 P39902 P39902 22 28 sprT Protein SprT yes yes 2 0.0038402 69.093 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9966000 3279000 3167300 0 0 1589500 1930200 0 0 2538 365 2739 14950;14951;14952;14953 11342;11343;11344;11345 11343 4 3279000 3242100 0 0 1917400 2138200 0 0 LAQEASQEAAR WEGNYSSWLEQKDQRLAQEASQEAARRKSI KDQRLAQEASQEAARRKSIEKELEWVRQGT R L A A R R 4 1 0 0 0 2 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 11 0 2 4 1172.5786 P0A9W3 P0A9W3 255 265 ettA Energy-dependent translational throttle protein EttA yes yes 2 3.4308E-05 98.033 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8309000 2612100 2735200 0 0 1574500 1387200 0 0 2539 177 2740 14954;14955;14956;14957 11346;11347;11348;11349 11346 4 2612100 2799700 0 0 1899300 1536700 0 0 LAQHPYDR ______________________________ ATTLGKRLAQHPYDRAVILNAGIKVSGDRH R L A D R A 1 1 0 1 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 8 0 0 2 998.49338 P15038 P15038 12 19 helD Helicase IV yes yes 2 4.9624E-05 111.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25612000 10094000 6831700 0 0 4434600 4251600 0 0 2540 281 2741 14958;14959;14960;14961 11350;11351;11352;11353 11350 4 10094000 6992900 0 0 5349400 4709800 0 0 LAQTIADMALR AHGRPVAPDANEPVKLAQTIADMALRYVVI EPVKLAQTIADMALRYVVITSVDRDDLRDG K L A L R Y 3 1 0 1 0 1 0 0 0 1 2 0 1 0 0 0 1 0 0 0 0 0 11 0 0 3 1201.6489 P60716 P60716 119 129 lipA Lipoyl synthase yes yes 2 0.00016027 82.749 By MS/MS 1 8010900 0 0 0 0 8010900 0 0 0 2541 382 2742 14962 11354 11354 1 0 0 0 0 9663500 0 0 0 LAQVSQKLME LKGEDKAAIEAKMQELAQVSQKLMEIAQQQ AKMQELAQVSQKLMEIAQQQHAQQQTAGAD E L A M E I 1 0 0 0 0 2 1 0 0 0 2 1 1 0 0 1 0 0 0 1 0 0 10 1 0 1 1145.6114 P0A6Y8 P0A6Y8 591 600 dnaK Chaperone protein DnaK yes yes 2 3.8453E-60 183.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 2 1 4 4 2 2 3547600000 214950000 220700000 671660000 564730000 190550000 170650000 675250000 839090000 2542 86 2743;2744 14963;14964;14965;14966;14967;14968;14969;14970;14971;14972;14973;14974;14975;14976;14977;14978;14979;14980;14981;14982;14983;14984;14985 11355;11356;11357;11358;11359;11360;11361;11362;11363;11364;11365;11366;11367;11368;11369;11370 11365 94 15 3201200000 3272100000 5707000000 4281600000 1944000000 1907800000 5196900000 4815400000 LAREKFAE GDDDSADDDNSIDPELAREKFAELRAQYVV DNSIDPELAREKFAELRAQYVVTRDTIKAK E L A A E L 2 1 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 8 2 1 2 962.51853 P00579 P00579 216 223 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0061228 92.491 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 110190000 9602400 8865200 22867000 19590000 0 6591600 17148000 25521000 2543 27 2745 14986;14987;14988;14989;14990;14991;14992 11371;11372 11372 2 147540000 135200000 194300000 148520000 0 99906000 131980000 146460000 LARLLGGSE ETHMQSLNKKARLQELARLLGGSEVTRNTL KARLQELARLLGGSEVTRNTLANAKELLAA E L A S E V 1 1 0 0 0 0 1 2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 9 1 0 1 914.51853 P05824 P05824 530 538 recN DNA repair protein RecN yes yes 2 9.1833E-60 173.28 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 2 2 528260000 8823000 26922000 68135000 35988000 123540000 85619000 43658000 135570000 2544 49 2746 14993;14994;14995;14996;14997;14998;14999;15000;15001;15002;15003;15004;15005;15006;15007;15008;15009;15010 11373;11374;11375;11376;11377;11378 11377 5 131240000 256100000 578930000 272850000 228170000 191570000 336000000 778010000 LASVTDR AATRARPVNNAALERLASVTDRVQARPVPS VNNAALERLASVTDRVQARPVPSALEKAPA R L A D R V 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 7 0 0 1 760.40792 P06710 P06710 450 456 dnaX DNA polymerase III subunit tau yes yes 2 0.011835 53.554 By MS/MS By matching 1 1 6547500 0 4220500 0 0 2327000 0 0 0 2545 51 2747 15011;15012 11379 11379 1 0 4320100 0 0 2807100 0 0 0 LASYLDK LTANEKSTMQELNSRLASYLDKVQALEEAN TMQELNSRLASYLDKVQALEEANNDLENKI R L A D K V 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 7 0 0 1 808.43307 CON__P35527;CON__P02533;CON__A2A4G1;CON__P19012;CON__P08727;CON__Q99456;CON__P05784;CON__P08779;CON__P13645 CON__P35527 164 170 no no 2 0.0024686 94.662 By MS/MS By MS/MS 1 1 1161200000 0 0 0 0 679110000 482140000 0 0 + 2546 15;12;4;10 2748 15013;15014 11380;11381 11381 2 0 0 0 0 819210000 534110000 0 0 LASYLDKVQALEEANNDLENK LTANEKSTMQELNSRLASYLDKVQALEEAN KVQALEEANNDLENKIQDWYDKKGPAAIQK R L A N K I 3 0 3 2 0 1 3 0 0 0 4 2 0 0 0 1 0 0 1 1 0 0 21 1 3 3 2376.1809 CON__P35527 CON__P35527 164 184 yes yes 2;3 9.8243E-153 201.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 294030000 32295000 24043000 0 0 133360000 104330000 0 0 + 2547 15 2749 15015;15016;15017;15018;15019 11382;11383;11384;11385;11386;11387 11384 6 32295000 24611000 0 0 160880000 115570000 0 0 LASYLDKVR LSGNEKVTMQNLNDRLASYLDKVRALEESN QNLNDRLASYLDKVRALEESNYELEGKIKE R L A V R A 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 1 0 1 1063.6026 CON__P02533;CON__A2A4G1;CON__P19012;CON__P08727;CON__Q99456;CON__P08779;CON__P13645 CON__P13645 157 165 no no 2;3 3.1739E-07 95.741 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 81943000 17630000 10061000 0 0 27218000 27034000 0 0 + 2548 12;4;10 2750 15020;15021;15022;15023;15024;15025;15026 11388;11389;11390;11391;11392;11393 11393 6 17630000 10298000 0 0 32834000 29947000 0 0 LATAKFVE TKQYDINEAIALLKELATAKFVESVDVAVN AIALLKELATAKFVESVDVAVNLGIDARKS E L A V E S 2 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 8 1 0 2 877.49092 P0A7L0 P0A7L0 33 40 rplA 50S ribosomal protein L1 yes yes 2 0.011804 43.124 By MS/MS 1 0 0 0 0 0 0 0 0 0 2549 110 2751 15027 11394 11394 1 0 0 0 0 0 0 0 0 LATELAR RDWYVVDATGKTLGRLATELARRLRGKHKA ATGKTLGRLATELARRLRGKHKAEYTPHVD R L A A R R 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 1 2 772.4443 P0AA10 P0AA10 28 34 rplM 50S ribosomal protein L13 yes yes 2 1.0892E-71 181.15 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1473000000 361540000 443920000 2131600 450220 330680000 334230000 0 0 2550 182 2752 15028;15029;15030;15031;15032;15033 11395;11396;11397;11398 11397 4 361540000 454390000 18112000 3413300 398900000 370250000 0 0 LATEMGADLAINSHTEDAAK NAKVIAIDVNDEQLKLATEMGADLAINSHT GADLAINSHTEDAAKIVQEKTGGAHAAVVT K L A A K I 5 0 1 2 0 0 2 1 1 1 2 1 1 0 0 1 2 0 0 0 0 0 20 0 2 5 2056.9735 P39451 P39451 201 220 adhP Alcohol dehydrogenase, propanol-preferring yes yes 3 0.00063277 39.276 By MS/MS 1 16042000 0 0 0 0 16042000 0 0 0 2551 364 2753 15034 11399 11399 1 0 0 0 0 19352000 0 0 0 LATLPTYEEAIAR AAFEGELIPASQIDRLATLPTYEEAIARLM DRLATLPTYEEAIARLMATMKEASAGKLVR R L A A R L 3 1 0 0 0 0 2 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 13 0 2 4 1446.7718 P0A7J3 P0A7J3 126 138 rplJ 50S ribosomal protein L10 yes yes 2 6.6628E-27 138.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 93063000 26682000 22816000 0 0 24537000 19029000 0 0 2552 106 2754 15035;15036;15037;15038 11400;11401;11402;11403;11404;11405 11401 6 26682000 23355000 0 0 29599000 21080000 0 0 LATNQKLILVCGRYE LSPQGRKLDQAGVSELATNQKLILVCGRYE LATNQKLILVCGRYEGIDERVIQTEIDEEW E L A Y E G 1 1 1 0 1 1 1 1 0 1 3 1 0 0 0 0 1 0 1 1 0 0 15 2 0 1 1776.9556 P0A873 P0A873 102 116 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 3 0.0066262 36.638 By MS/MS By matching By matching By MS/MS 1 1 1 1 8741800 0 1365300 0 1807200 0 0 1886600 3682600 2553 140 2755 15039;15040;15041;15042 11406 11406 0 0 20821000 0 13701000 0 0 14520000 21134000 LATPFAEGEALR RWRMGVRNSAHTLAKLATPFAEGEALRLSS LAKLATPFAEGEALRLSSVSHPEYIGRVAK K L A L R L 3 1 0 0 0 0 2 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 12 0 2 4 1273.6667 P30177 P30177 187 198 ybiB Uncharacterized protein YbiB yes yes 2 2.0575E-19 133.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 257040000 72644000 64144000 0 0 66914000 53335000 0 0 2554 332 2756 15043;15044;15045;15046 11407;11408;11409;11410;11411 11408 4 72644000 65658000 0 0 80718000 59083000 0 0 LAVDEKYRGQGLA VDVQGEDLQWVGMAPLAVDEKYRGQGLARQ APLAVDEKYRGQGLARQLVYEGLDSLNEFG P L A L A R 2 1 0 1 0 1 1 2 0 0 2 1 0 0 0 0 0 0 1 1 0 0 13 2 1 1 1418.7518 P63417 P63417 77 89 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 3 0.016326 48.568 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23270000 3931500 3039000 0 0 9472100 6827300 0 0 2555 394 2757 15047;15048;15049;15050 11412 11412 1 23733000 18188000 0 0 13485000 9732300 0 0 LAVFAVR ADPDRLFESSGCAGKLAVFAVRLDTFEAEK ESSGCAGKLAVFAVRLDTFEAEKNQQVFYI K L A V R L 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 7 0 0 2 774.47521 P06149 P06149 260 266 dld D-lactate dehydrogenase yes yes 2 0.0035438 56.51 By MS/MS 1 0 0 0 0 0 0 0 0 0 2556 50 2758 15051 11413 11413 1 0 0 0 0 0 0 0 0 LAVNAGDFIAK IPPSQIRVVATATLRLAVNAGDFIAKAQEI ATLRLAVNAGDFIAKAQEILGCPVQVISGE R L A A K A 3 0 1 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 0 0 3 1117.6132 P25552 P25552 89 99 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 1.8933E-11 120.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 258110000 64718000 58004000 0 0 68404000 66983000 0 0 2557 316 2759 15052;15053;15054;15055 11414;11415;11416;11417 11414 4 64718000 59373000 0 0 82516000 74203000 0 0 LAVRQAVKGKA LVLGEDVTQTGARVALAVRQAVKGKAREMA ARVALAVRQAVKGKAREMAAAQKVADWQIA A L A K A R 3 1 0 0 0 1 0 1 0 0 1 2 0 0 0 0 0 0 0 2 0 0 11 3 0 2 1139.7139 P33602 P33602 391 401 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 0.021901 32.523 By MS/MS By MS/MS By MS/MS 1 1 1 7365900 1586700 1116100 0 0 0 4663100 0 0 2558 345 2760 15056;15057;15058 11418 11418 1 9578100 6680000 0 0 0 6647200 0 0 LAWLAEQDQNSPIKR YFPTNRGLEGKIGEKLAWLAEQDQNSPIKR LAWLAEQDQNSPIKRYR_____________ K L A K R Y 2 1 1 1 0 2 1 0 0 1 2 1 0 0 1 1 0 1 0 0 0 0 15 1 1 3 1767.9268 P0AAZ4 P0AAZ4 431 445 rarA Replication-associated recombination protein A yes yes 3 4.2988E-05 98.592 By MS/MS By MS/MS 1 1 19487000 12908000 6578700 0 0 0 0 0 0 2559 189 2761 15059;15060 11419;11420 11420 2 12908000 6734000 0 0 0 0 0 0 LAYLKKNHEEE TKADLEMQIESLTEELAYLKKNHEEEMKDL LTEELAYLKKNHEEEMKDLRNVSTGDVNVE E L A E E M 1 0 1 0 0 0 3 0 1 0 2 2 0 0 0 0 0 0 1 0 0 0 11 2 2 1 1372.6987 CON__P02533;CON__A2A4G1;CON__P19012;CON__P08727;CON__P13645;CON__P02535-1;CON__Q7Z3Y8 CON__P13645 280 290 no no 3 1.1152E-06 90.05 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 151610000 12142000 13719000 14317000 15650000 9442400 11607000 29291000 45444000 + 2560 12;4 2762 15061;15062;15063;15064;15065;15066;15067;15068 11421;11422;11423;11424;11425;11426 11424 5 186550000 209210000 121650000 118650000 145370000 175930000 225430000 260800000 LCKEYDELA TAEFLVKSKHRDLTALCKEYDELAETQGKL HRDLTALCKEYDELAETQGKLEEKLQELEA A L C L A E 1 0 0 1 1 0 2 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 9 1 2 0 1139.5169 LSD1-FL-His LSD1-FL-His 492 500 yes yes 2 0.0072108 53.166 By MS/MS 1 0 0 0 0 0 0 0 0 0 2561 24 2763 15069 11427 11427 1 0 0 0 0 0 0 0 0 LCNRHNALLIFDE GVVPASNAFLQGLRELCNRHNALLIFDEVQ RELCNRHNALLIFDEVQTGVGRTGELYAYM E L C D E V 1 1 2 1 1 0 1 0 1 1 3 0 0 1 0 0 0 0 0 0 0 0 13 1 0 1 1613.7984 P77581 P77581 212 224 astC Succinylornithine transaminase yes yes 3 0.0024397 38.021 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 329020000 111200000 97031000 36371000 46352000 8096400 6229000 3076100 20670000 2562 437 2764 15070;15071;15072;15073;15074;15075;15076;15077 11428;11429 11428 2 1708600000 1479700000 309030000 351420000 124650000 94410000 23674000 118620000 LCTVAQRPDTHGYSTSR MGNPDGATPPHIVEKLCTVAQRPDTHGYST TVAQRPDTHGYSTSRGIPRLRRAISRWYQD K L C S R G 1 2 0 1 1 1 0 1 1 0 1 0 0 0 1 2 3 0 1 1 0 0 17 1 0 2 1947.9221 P77434 P77434 58 74 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 4 9.9581E-17 95.347 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 85524000 21444000 23044000 0 0 22439000 18597000 0 0 2563 433 2765 15078;15079;15080;15081 11430;11431;11432;11433 11430 4 21444000 23588000 0 0 27068000 20602000 0 0 LCVEQCK VMMDRVRTQERLIMKLCVEQCKMPKKNFIT TQERLIMKLCVEQCKMPKKNFITLFTGNET K L C C K M 0 0 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 1 0 935.42047 P00579 P00579 290 296 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0051883 47.916 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2564 27 2766 15082;15083 11434;11435 11435 2 0 0 0 0 0 0 0 0 LDAFLASIR TPSLYTVQLAGTSGKLDAFLASIRDVAKIV AGTSGKLDAFLASIRDVAKIVEVARSGVVG K L D I R D 2 1 0 1 0 0 0 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 9 0 0 2 1004.5655 P00894 P00894 131 139 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 0.0011168 89.355 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 64211000 21846000 16540000 0 0 11813000 14012000 0 0 2565 30 2767 15084;15085;15086;15087;15088;15089;15090;15091 11436;11437;11438;11439 11437 4 23821000 18931000 0 0 14314000 15838000 0 0 LDAINQLR ______________________________ IETLKQRLDAINQLRVDRALAAMGPAFQQV R L D L R V 1 1 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 8 0 0 1 941.52943 P00936 P00936 12 19 cyaA Adenylate cyclase yes yes 2 0.0081746 55.676 By matching By MS/MS By matching 1 1 1 16087000 0 5442000 0 0 4858000 5787500 0 0 2566 31 2768 15092;15093;15094 11440 11440 1 0 5570500 0 0 5860200 6411200 0 0 LDDIAAWTYR RAKHPLFVTNVDDTRLDDIAAWTYRAPVED VDDTRLDDIAAWTYRAPVEDQARLGFAIAH R L D Y R A 2 1 0 2 0 0 0 0 0 1 1 0 0 0 0 0 1 1 1 0 0 0 10 0 0 2 1222.5982 P33602 P33602 439 448 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 8.9443E-06 107.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87600000 18963000 21692000 0 0 25133000 21813000 0 0 2567 345 2769 15095;15096;15097;15098 11441;11442;11443 11442 3 18963000 22204000 0 0 30318000 24164000 0 0 LDDTSSEFNTQR LEQLKVIRERLKNARLDDTSSEFNTQRVEC NARLDDTSSEFNTQRVECLELDNLMETAYA R L D Q R V 0 1 1 2 0 1 1 0 0 0 1 0 0 1 0 2 2 0 0 0 0 0 12 0 1 0 1411.6216 P0AC41 P0AC41 499 510 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0 300.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 203230000 64847000 45041000 0 0 45087000 48258000 0 0 2568 203 2770 15099;15100;15101;15102 11444;11445;11446;11447 11444 4 64847000 46104000 0 0 54389000 53459000 0 0 LDDVNRPK EWVTQNIMNGRGVNRLDDVNRPKSPEIKND NGRGVNRLDDVNRPKSPEIKNDIRLFRQEL R L D P K S 0 1 1 2 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 8 1 0 1 955.50869 P23830 P23830 200 207 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.0044826 91.041 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 14016000 4001600 4701900 0 0 2866900 2446000 0 0 2569 304 2771 15103;15104;15105;15106 11448;11449;11450;11451 11451 4 4001600 4812900 0 0 3458300 2709600 0 0 LDEDEQYR DAGQTLTTDWVQWNRLDEDEQYRGRYQISV DWVQWNRLDEDEQYRGRYQISVKPQGYQQA R L D Y R G 0 1 0 2 0 1 2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 2 0 1066.4567 P0A903 P0A903 151 158 bamC Outer membrane protein assembly factor BamC yes yes 2 0.0050688 45.081 By MS/MS 1 0 0 0 0 0 0 0 0 0 2570 156 2772 15107 11452 11452 1 0 0 0 0 0 0 0 0 LDEFETVGNTIR ARGVLVNITAGFDLRLDEFETVGNTIRAFA DLRLDEFETVGNTIRAFASDNATVVIGTSL R L D I R A 0 1 1 1 0 0 2 1 0 1 1 0 0 1 0 0 2 0 0 1 0 0 12 0 2 0 1392.6885 P0A9A6 P0A9A6 272 283 ftsZ Cell division protein FtsZ yes yes 2 8.537E-27 135.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35642000 13413000 10795000 0 0 11434000 0 0 0 2571 161 2773 15108;15109;15110;15111 11453;11454;11455;11456 11456 4 13413000 11050000 0 0 13793000 0 0 0 LDEHQPVFMPVGAFCPPLEK MGITPTLHGGQAQAKLDEHQPVFMPVGAFC PVFMPVGAFCPPLEKQLAMRWRMGVRNSAH K L D E K Q 1 0 0 1 1 1 2 1 1 0 2 1 1 2 4 0 0 0 0 2 0 0 20 0 2 5 2310.1177 P30177 P30177 148 167 ybiB Uncharacterized protein YbiB yes yes 3 2.6684E-06 66.636 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 80253000 24094000 19351000 0 0 17761000 19046000 0 0 2572 332 2774 15112;15113;15114;15115 11457;11458;11459 11457 3 24094000 19807000 0 0 21425000 21099000 0 0 LDFIAERENQQ HAIGKTRSIERINKALDFIAERENQQ____ INKALDFIAERENQQ_______________ A L D Q Q - 1 1 1 1 0 2 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 11 1 2 1 1361.6575 P04805 P04805 461 471 gltX Glutamate--tRNA ligase yes yes 2 1.7286E-07 101.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13399000 1746400 2008200 0 0 2845400 6799000 0 0 2573 45 2775 15116;15117;15118;15119 11460;11461;11462 11461 3 10542000 12019000 0 0 4050900 9692000 0 0 LDGLSDAFSVFR YRFLIDSRDTETDSRLDGLSDAFSVFRCHS DSRLDGLSDAFSVFRCHSIMNCVSVCPKGL R L D F R C 1 1 0 2 0 0 0 1 0 0 2 0 0 2 0 2 0 0 0 1 0 0 12 0 0 1 1325.6616 P07014 P07014 194 205 sdhB Succinate dehydrogenase iron-sulfur subunit yes yes 2 4.0917E-14 80.763 By MS/MS By MS/MS By MS/MS 1 1 1 23521000 0 14930000 0 0 0 8590800 0 0 2574 56 2776 15120;15121;15122 11463;11464;11465 11464 2 0 15283000 0 0 0 9516600 0 0 LDGRPVMIIGHQK RAYADDKAIVGGIARLDGRPVMIIGHQKGR ARLDGRPVMIIGHQKGRETKEKIRRNFGMP R L D Q K G 0 1 0 1 0 1 0 2 1 2 1 1 1 0 1 0 0 0 0 1 0 0 13 1 0 1 1462.8079 P0ABD5 P0ABD5 108 120 accA Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha yes yes 3 0.020753 28.277 By matching By MS/MS By MS/MS By matching 1 1 1 1 26508000 9577600 4925900 0 0 5047700 6956900 0 0 2575 198 2777 15123;15124;15125;15126 11466 11466 1 9577600 5042100 0 0 6089100 7706700 0 0 LDGVKPPK ELGKHKWVAMGEEYKLDGVKPPKKETMERV AMGEEYKLDGVKPPKKETMERVKGILEQYG K L D P K K 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 0 0 0 0 1 0 0 8 1 0 2 852.5069 P0A9N4 P0A9N4 219 226 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 0.0089897 68.915 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20289000 7099600 4438200 0 0 4928900 3822700 0 0 2576 171 2778 15127;15128;15129;15130 11467;11468;11469 11468 2 7099600 4542900 0 0 5945700 4234700 0 0 LDHEPSAEEIAEQLDKPVDDVSR ELNVYLRTARELSHKLDHEPSAEEIAEQLD EIAEQLDKPVDDVSRMLRLNERITSVDTPL K L D S R M 2 1 0 4 0 1 4 0 1 1 2 1 0 0 2 2 0 0 0 2 0 0 23 1 4 4 2591.2351 P13445 P13445 189 211 rpoS RNA polymerase sigma factor RpoS yes yes 4 7.2992E-15 81.949 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 79807000 22469000 20065000 0 0 17495000 19777000 0 0 2577 279 2779 15131;15132;15133;15134 11470;11471;11472;11473 11470 4 22469000 20539000 0 0 21104000 21909000 0 0 LDHGWWVVSHEQK ______________________________ EKLDHGWWVVSHEQKLWLPKGELPYGEAAN K L D Q K L 0 0 0 1 0 1 1 1 2 0 1 1 0 0 0 1 0 2 0 2 0 0 13 0 1 0 1619.7845 P32664 P32664 8 20 nudC NADH pyrophosphatase yes yes 3;4 1.4743E-07 81.904 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 152840000 48499000 37071000 0 0 31286000 35987000 0 0 2578 340 2780 15135;15136;15137;15138;15139;15140;15141;15142 11474;11475;11476;11477;11478;11479 11476 6 48499000 37946000 0 0 37740000 39866000 0 0 LDIDTTGLVLMTDDGQWSHR FLDEPVAWKLHAAGRLDIDTTGLVLMTDDG TGLVLMTDDGQWSHRITSPRHHCEKTYLVT R L D H R I 0 1 0 4 0 1 0 2 1 1 3 0 1 0 0 1 3 1 0 1 0 0 20 0 0 0 2272.0794 P0AA43 P0AA43 101 120 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3 5.5439E-28 111.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 210470000 49503000 67215000 0 0 6752400 87001000 0 0 2579 183 2781;2782 15143;15144;15145;15146;15147;15148;15149 11480;11481;11482;11483;11484;11485;11486;11487;11488 11483 176 9 49503000 68801000 0 0 8145400 96377000 0 0 LDISGRP FGFVLPMDECLARCALDISGRPHLEYKAEF DECLARCALDISGRPHLEYKAEFTYQRVGD A L D R P H 0 1 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 7 1 0 0 756.413 P06987 P06987 271 277 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 0.00079907 79.454 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 49969000 5173200 4575200 0 0 14658000 25563000 0 0 2580 55 2783 15150;15151;15152;15153;15154 11489;11490 11490 2 31228000 27383000 0 0 20533000 36440000 0 0 LDKFIAQQLGVSR ______________________________ MRLDKFIAQQLGVSRAIAGREIRGNRVTVD R L D S R A 1 1 0 1 0 2 0 1 0 1 2 1 0 1 0 1 0 0 0 1 0 0 13 1 0 1 1473.8304 P0AA43 P0AA43 3 15 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3 4.5071E-20 130.19 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 78838000 20697000 29081000 0 1213100 9931200 17916000 0 0 2581 183 2784 15155;15156;15157;15158;15159 11491;11492;11493;11494 11491 4 20697000 29767000 0 9197400 11980000 19847000 0 0 LDLDPNR QIAEASDELRHYCDRLDLDPNRLFELEQRI ELRHYCDRLDLDPNRLFELEQRISKQISLA R L D N R L 0 1 1 2 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 7 0 0 1 841.42938 P05824 P05824 291 297 recN DNA repair protein RecN yes yes 2 0.0062502 60.788 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15515000 4683400 3341600 0 0 3573900 3915700 0 0 2582 49 2785 15160;15161;15162;15163 11495;11496;11497;11498 11496 4 4683400 3420500 0 0 4311200 4337700 0 0 LDLDPNRLFELEQR QIAEASDELRHYCDRLDLDPNRLFELEQRI RLDLDPNRLFELEQRISKQISLARKHHVSP R L D Q R I 0 2 1 2 0 1 2 0 0 0 4 0 0 1 1 0 0 0 0 0 0 0 14 1 2 1 1756.9108 P05824 P05824 291 304 recN DNA repair protein RecN yes yes 3 0.0073085 35.037 By matching By MS/MS By matching By matching 1 1 1 1 11172000 3995000 3775100 0 0 1840300 1561900 0 0 2583 49 2786 15164;15165;15166;15167 11499 11499 1 3995000 3864200 0 0 2220000 1730300 0 0 LDLENAILIHDPQLELAPQR WMLITGNNLNPRAWRLDLENAILIHDPQLE AILIHDPQLELAPQREKELELIREHTTIVK R L D Q R E 2 1 1 2 0 2 2 0 1 2 5 0 0 0 2 0 0 0 0 0 0 0 20 0 2 4 2297.2379 P23830 P23830 382 401 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 3 2.8432E-26 107.3 By MS/MS 1 9710800 0 0 0 0 0 9710800 0 0 2584 304 2787 15168 11500 11500 1 0 0 0 0 0 10757000 0 0 LDLILVEGFKHEEIAK ELDLQFLASRMDTSKLDLILVEGFKHEEIA DLILVEGFKHEEIAKIVLFRDGAGHRPEEL K L D A K I 1 0 0 1 0 0 3 1 1 2 3 2 0 1 0 0 0 0 0 1 0 0 16 1 3 1 1853.0299 P32125 P32125 102 117 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 3 4.5388E-11 87.02 By matching By matching By MS/MS By MS/MS 1 1 1 1 19517000 4706800 3095000 0 0 5164400 6550600 0 0 2585 337 2788 15169;15170;15171;15172 11501;11502 11501 2 4706800 3168100 0 0 6229900 7256500 0 0 LDNLHVAMVGDLK QTLLDLFTIQETQGRLDNLHVAMVGDLKYG GRLDNLHVAMVGDLKYGRTVHSLTQALAKF R L D L K Y 1 0 1 2 0 0 0 1 1 0 3 1 1 0 0 0 0 0 0 2 0 0 13 0 0 1 1423.7493 P0A786 P0A786 153 165 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 3 0.00069544 58.831 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41284000 5500200 11387000 0 0 11805000 12591000 0 0 2586 97 2789 15173;15174;15175;15176 11503;11504;11505;11506 11506 4 5500200 11656000 0 0 14241000 13948000 0 0 LDNLNAAR LQFTLFRPFNWMGPRLDNLNAARIGSSRAI FNWMGPRLDNLNAARIGSSRAITQLILNLV R L D A R I 2 1 2 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 0 2 885.46683 P77398 P77398 498 505 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 1.1542E-58 178.6 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 9676300000 3134600000 3925800000 0 0 2614100000 1814800 0 0 2587 432 2790 15177;15178;15179;15180;15181;15182;15183 11507;11508;11509;11510;11511;11512;11513 11511 7 3134600000 4018500000 0 0 3153400000 2010400 0 0 LDNVVYR KGNTGENLLALLEGRLDNVVYRMGFGATRA LLALLEGRLDNVVYRMGFGATRAEARQLVS R L D Y R M 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 7 0 0 0 877.46577 P0A7V8 P0A7V8 98 104 rpsD 30S ribosomal protein S4 yes yes 2 1.0859E-17 143.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 727620000 203370000 166360000 0 0 186630000 171270000 0 0 2588 130 2791 15184;15185;15186;15187 11514;11515;11516;11517 11516 4 203370000 170280000 0 0 225130000 189730000 0 0 LDPSEYANVK AEVDILYMTRVQKERLDPSEYANVKAQFVL VQKERLDPSEYANVKAQFVLRASDLHNAKA R L D V K A 1 0 1 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 10 0 1 2 1134.5557 P0A786 P0A786 236 245 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.0093569 49.715 By MS/MS 1 4504900 0 0 0 0 4504900 0 0 0 2589 97 2792 15188 11518 11518 1 0 0 0 0 5434200 0 0 0 LDQAGVSELATNQK GEGAKVIYLSPQGRKLDQAGVSELATNQKL KLDQAGVSELATNQKLILVCGRYEGIDERV K L D Q K L 2 0 1 1 0 2 1 1 0 0 2 1 0 0 0 1 1 0 0 1 0 0 14 0 1 2 1472.7471 P0A873 P0A873 94 107 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 2.573E-145 209.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 72536000 15398000 14541000 0 0 21685000 20912000 0 0 2590 140 2793 15189;15190;15191;15192 11519;11520;11521;11522;11523 11521 5 15398000 14884000 0 0 26159000 23166000 0 0 LDQVEILVLDEADR TPGRLLDLEHQNAVKLDQVEILVLDEADRM KLDQVEILVLDEADRMLDMGFIHDIRRVLT K L D D R M 1 1 0 3 0 1 2 0 0 1 3 0 0 0 0 0 0 0 0 2 0 0 14 0 2 1 1626.8465 P25888 P25888 147 160 rhlE ATP-dependent RNA helicase RhlE yes yes 2 3.2171E-167 222.99 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 3 1 1 1 535810000 118980000 102390000 0 564220 131090000 182790000 0 0 2591 318 2794 15193;15194;15195;15196;15197;15198;15199;15200 11524;11525;11526;11527 11527 4 125130000 111560000 0 4277700 158130000 202490000 0 0 LDRLDEPSSNK LEIVSPVVIGSVRARLDRLDEPSSNKVLPI VRARLDRLDEPSSNKVLPITIHGDAAVTGQ R L D N K V 0 1 1 2 0 0 1 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 11 1 1 1 1272.631 P0AFG3 P0AFG3 338 348 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 2.41E-08 112.75 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 129780000 39251000 41971000 0 0 21352000 27206000 0 0 2592 246 2795 15201;15202;15203;15204;15205;15206;15207;15208 11528;11529;11530;11531;11532;11533;11534;11535 11531 8 39251000 42962000 0 0 25757000 30138000 0 0 LDSATPQR L D Q R 1 1 0 1 0 1 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 8 0 0 2 886.45084 REV__P0A9K7 yes yes 2 0.0021453 86.086 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 5 3 633570000 194610000 129480000 0 0 185870000 123610000 0 0 + 2593 444 2796 15209;15210;15211;15212;15213;15214;15215;15216;15217;15218;15219;15220;15221;15222;15223 11536;11537;11538;11539;11540;11541;11542;11543;11544 11542 8 194610000 132540000 0 0 224390000 136930000 0 0 LDSELKNMQDMVEDYR NLRRRVDQLKSDQSRLDSELKNMQDMVEDY DSELKNMQDMVEDYRNKYEDEINKRTNAEN R L D Y R N 0 1 1 3 0 1 2 0 0 0 2 1 2 0 0 1 0 0 1 1 0 0 16 1 2 0 1984.887 CON__P04264 CON__P04264 252 267 yes yes 2;3 7.5722E-18 105.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 125840000 12807000 14466000 0 0 49038000 49527000 0 0 + 2594 9 2797 15224;15225;15226;15227;15228;15229 11545;11546;11547;11548;11549;11550 11549 4;5 6 12807000 14808000 0 0 59154000 54865000 0 0 LDVVNFISHGTR ESQAAYLLRKHEVSRLDVVNFISHGTRKDE VSRLDVVNFISHGTRKDEPTQSSDPGSQPN R L D T R K 0 1 1 1 0 0 0 1 1 1 1 0 0 1 0 1 1 0 0 2 0 0 12 0 0 0 1356.715 P0ABH9 P0ABH9 132 143 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 3 0.0041856 43.382 By matching By matching By MS/MS By matching 1 1 1 1 27389000 7686100 6304000 0 0 8761400 4637500 0 0 2595 201 2798 15230;15231;15232;15233 11551 11551 1 7686100 6452800 0 0 10569000 5137300 0 0 LDVVNLISK KVCEFWADRGVDGLRLDVVNLISKDPRFPE GVDGLRLDVVNLISKDPRFPEDLDGDGRRF R L D S K D 0 0 1 1 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 2 0 0 9 0 0 0 999.59645 P28904 P28904 199 207 treC Trehalose-6-phosphate hydrolase yes yes 2 0.0020886 72.643 By MS/MS 1 7447500 0 7447500 0 0 0 0 0 0 2596 328 2799 15234 11552 11552 1 0 7623200 0 0 0 0 0 0 LDYLHGHGSLISGLETA TEDGVLVDESPVSAPLDYLHGHGSLISGLE YLHGHGSLISGLETALEGHEVGDKFDVAVG P L D T A L 1 0 0 1 0 0 1 3 2 1 4 0 0 0 0 2 1 0 1 0 0 0 17 0 1 0 1781.8948 P0A9K9 P0A9K9 32 48 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 9.0698E-56 165.11 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 249690000 6497200 2957600 0 0 90112000 150130000 0 0 2597 169 2800 15235;15236;15237;15238;15239;15240;15241;15242;15243 11553;11554;11555;11556 11556 4 29257000 17701000 0 0 128290000 214010000 0 0 LEAKLAE ATKKNIEFFEARRAELEAKLAEVLAAANAR FFEARRAELEAKLAEVLAAANARAEKINAL E L E A E V 2 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 1 1 2 772.43307 P0A7R1 P0A7R1 54 60 rplI 50S ribosomal protein L9 yes yes 2 0.021231 58.981 By MS/MS By MS/MS By MS/MS 1 1 1 16058000 0 0 7531300 4788200 0 0 3738400 0 2598 119 2801 15244;15245;15246 11557 11557 1 0 0 63993000 36302000 0 0 28771000 0 LEALREEQMAK LEEGTAYKCYCSKERLEALREEQMAKGEKP SKERLEALREEQMAKGEKPRYDGRCRHSHE R L E A K G 2 1 0 0 0 1 3 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 11 1 3 2 1316.6758 P04805 P04805 105 115 gltX Glutamate--tRNA ligase yes yes 2;3 4.3664E-05 102.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 84023000 29035000 21580000 0 0 17457000 15951000 0 0 2599 45 2802 15247;15248;15249;15250;15251;15252;15253;15254 11558;11559;11560;11561;11562;11563;11564 11558 7 29035000 22089000 0 0 21058000 17671000 0 0 LEANPPSDVYLSSRDRQILDWHFANLE ELAETQGKLEEKLQELEANPPSDVYLSSRD SRDRQILDWHFANLEFANATPLSTLSLKHW E L E L E F 2 2 2 3 0 1 2 0 1 1 4 0 0 1 2 3 0 1 1 1 0 0 27 2 1 4 3184.5578 LSD1-FL-His LSD1-FL-His 513 539 yes yes 3;4 2.4622E-88 152.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 2 2930100000 1152400 1450000 0 0 1513700000 1413800000 0 0 2600 24 2803 15255;15256;15257;15258;15259;15260;15261 11565;11566;11567;11568;11569;11570 11567 6 17707000 22112000 0 0 23298000000 21428000000 0 0 LEDKFENMGAQMVKE PTITKDGVSVAREIELEDKFENMGAQMVKE LEDKFENMGAQMVKEVASKANDAAGDGTTT E L E K E V 1 0 1 1 0 1 3 1 0 0 1 2 2 1 0 0 0 0 0 1 0 0 15 2 2 1 1767.8172 P0A6F5 P0A6F5 62 76 groL 60 kDa chaperonin yes yes 3 2.3257E-07 71.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 2 131220000 0 0 31343000 22369000 9621600 12006000 23515000 32361000 2601 68 2804;2805 15262;15263;15264;15265;15266;15267;15268;15269;15270;15271 11571;11572;11573;11574 11572 78;79 4 0 0 266320000 169590000 148130000 181970000 180980000 185710000 LEEGLNPNAILVPQQGVTR NPDHTLLPGMFVRARLEEGLNPNAILVPQQ LNPNAILVPQQGVTRTPRGDATVLVVGADD R L E T R T 1 1 2 0 0 2 2 2 0 1 3 0 0 0 2 0 1 0 0 2 0 0 19 0 2 3 2047.1062 P0AE06 P0AE06 297 315 acrA Multidrug efflux pump subunit AcrA yes yes 2 4.7587E-37 134.68 By matching By matching By MS/MS By MS/MS 1 1 1 1 19064000 4392400 2522500 0 0 5157600 6991700 0 0 2602 232 2806 15272;15273;15274;15275 11575;11576 11575 2 4392400 2582000 0 0 6221700 7745200 0 0 LEEKLQELEANPPSDVYLSSR ALCKEYDELAETQGKLEEKLQELEANPPSD ELEANPPSDVYLSSRDRQILDWHFANLEFA K L E S R D 1 1 1 1 0 1 4 0 0 0 4 1 0 0 2 3 0 0 1 1 0 0 21 1 4 3 2416.2122 LSD1-FL-His LSD1-FL-His 506 526 yes yes 3 6.64E-53 139.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 123470000 40098000 53794000 0 0 11452000 18127000 0 0 2603 24 2807 15276;15277;15278;15279 11577;11578;11579 11577 3 40098000 55064000 0 0 13815000 20081000 0 0 LEELEIDGLTLER EKLQQLKQRAIHCGRLEELEIDGLTLERAL GRLEELEIDGLTLERALVFPSGLAILIAIF R L E E R A 0 1 0 1 0 0 4 1 0 1 4 0 0 0 0 0 1 0 0 0 0 0 13 0 4 0 1528.7985 P25552 P25552 249 261 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 1.0237E-235 250.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 232040000 45388000 41375000 0 0 77216000 68061000 0 0 2604 316 2808 15280;15281;15282;15283 11580;11581;11582;11583;11584 11584 5 45388000 42352000 0 0 93146000 75396000 0 0 LEEQLEHAAHHDAMTGLLNR KLMLCIVHDITEQKRLEEQLEHAAHHDAMT EHAAHHDAMTGLLNRRQFYHITEPGQMQHL R L E N R R 3 1 1 1 0 1 3 1 3 0 4 0 1 0 0 0 1 0 0 0 0 0 20 0 3 3 2284.1019 P77302 P77302 245 264 ydaM Probable diguanylate cyclase YdaM yes yes 3 0.017911 25.888 By matching By matching By MS/MS 1 1 1 9309700 2529700 0 0 0 2324900 4455100 0 0 2605 429 2809 15284;15285;15286 11585 11585 0 2529700 0 0 0 2804500 4935300 0 0 LEGHEVGDKFDVA YLHGHGSLISGLETALEGHEVGDKFDVAVG TALEGHEVGDKFDVAVGANDAYGQYDENLV A L E V A V 1 0 0 2 0 0 2 2 1 0 1 1 0 1 0 0 0 0 0 2 0 0 13 1 2 0 1414.6729 P0A9K9 P0A9K9 49 61 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 9.661E-62 171.67 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 3027400000 541800000 530700000 0 0 451360000 1503600000 0 0 2606 169 2810 15287;15288;15289;15290;15291;15292;15293;15294;15295 11586;11587;11588;11589;11590;11591;11592;11593 11593 7 3270600000 3176300000 0 0 642590000 2143300000 0 0 LEGHEVGDKFDVAVGA YLHGHGSLISGLETALEGHEVGDKFDVAVG EGHEVGDKFDVAVGANDAYGQYDENLVQRV A L E G A N 2 0 0 2 0 0 2 3 1 0 1 1 0 1 0 0 0 0 0 3 0 0 16 1 2 1 1641.7999 P0A9K9 P0A9K9 49 64 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 1.2335E-08 77.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 130530000 12947000 14840000 0 0 35641000 67105000 0 0 2607 169 2811 15296;15297;15298;15299;15300;15301;15302;15303 11594;11595;11596;11597;11598 11597 5 78154000 88820000 0 0 50742000 95658000 0 0 LEGNGQLAR LSAGHFSIYERILHKLEGNGQLARAAKIWP ERILHKLEGNGQLARAAKIWPQLEANTQQI K L E A R A 1 1 1 0 0 1 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1 1 956.50394 P0AFX4 P0AFX4 80 88 rsd Regulator of sigma D yes yes 2 1.0476E-19 141.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42254000 15750000 12620000 0 0 7588000 6296100 0 0 2608 251 2812 15304;15305;15306;15307 11599;11600;11601;11602 11599 4 15750000 12918000 0 0 9153400 6974600 0 0 LEGTDWTIHNHANVFSR NEPQLADAPQTVSWKLEGTDWTIHNHANVF GTDWTIHNHANVFSRTGLDIGARFFMQHLP K L E S R T 1 1 2 1 0 0 1 1 2 1 1 0 0 1 0 1 2 1 0 1 0 0 17 0 1 1 1995.9551 P42596 P42596 194 210 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 3;4 1.6129E-83 175.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 501550000 157230000 156110000 0 0 48520000 139690000 0 0 2609 366 2813 15308;15309;15310;15311;15312;15313;15314 11603;11604;11605;11606;11607;11608;11609;11610 11608 8 157230000 159800000 0 0 58530000 154740000 0 0 LEGYQEDQAK IPVDMATEFMTQVAKLEGYQEDQAKKLAKQ TQVAKLEGYQEDQAKKLAKQQVEGASAMGQ K L E A K K 1 0 0 1 0 2 2 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 10 0 2 1 1179.5408 P77804 P77804 423 432 ydgA Protein YdgA yes yes 2 0.020668 41.448 By MS/MS By MS/MS By MS/MS 1 1 2 8017200 2682900 0 0 0 2221000 3113300 0 0 2610 439 2814 15315;15316;15317;15318 11611 11611 1 2682900 0 0 0 2679200 7701100 0 0 LEIEVARRNTA SDDIKALAEKLLHNPLEIEVARRNTASDQV LHNPLEIEVARRNTASDQVTQHVHFVDKKR P L E T A S 2 2 1 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 11 2 2 1 1270.6993 P25888 P25888 206 216 rhlE ATP-dependent RNA helicase RhlE yes yes 3 0.0006187 60.434 By MS/MS By MS/MS By MS/MS 1 1 1 11631000 2604500 2017300 0 0 0 7008900 0 0 2611 318 2815 15319;15320;15321 11612 11612 1 15722000 12073000 0 0 0 9991200 0 0 LEIVTGQAGDGITMQGSQLA VISVAPLLIACGDGALEIVTGQAGDGITMQ GQAGDGITMQGSQLAQTLGLVQGSRLNSQP A L E L A Q 2 0 0 1 0 3 1 4 0 2 2 0 1 0 0 1 2 0 0 1 0 0 20 0 1 1 1987.9885 P77398 P77398 274 293 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 2.0217E-05 62.924 By MS/MS By MS/MS 2 3 156610000 0 0 0 0 51294000 105310000 0 0 2612 432 2816;2817 15322;15323;15324;15325;15326 11613;11614;11615;11616 11614 3 0 0 0 0 73027000 150120000 0 0 LEKEIETYHNLLEGGQEDFESSGAGK CQNQEYSLLLSIKMRLEKEIETYHNLLEGG LEGGQEDFESSGAGKIGLGGRGGSGGSYGR R L E G K I 1 0 1 1 0 1 6 4 1 1 3 2 0 1 0 2 1 0 1 0 0 0 26 1 6 1 2879.3461 CON__P35527 CON__P35527 447 472 yes yes 4 2.9434E-18 83.881 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43682000 6390600 7464000 0 0 16083000 13745000 0 0 + 2613 15 2818 15327;15328;15329;15330 11617;11618;11619;11620 11620 4 6390600 7640100 0 0 19401000 15226000 0 0 LELINPPEEAFVDGR ENFDINVLRRERGVKLELINPPEEAFVDGR LELINPPEEAFVDGRIIRALQANLFAVLRD K L E G R I 1 1 1 1 0 0 3 1 0 1 2 0 0 1 2 0 0 0 0 1 0 0 15 0 3 3 1697.8625 P0ADR8 P0ADR8 74 88 ygdH LOG family protein YgdH yes yes 2 0.0016667 56.359 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27238000 6151100 7927000 0 0 5031300 8128700 0 0 2614 225 2819 15331;15332;15333;15334 11621;11622;11623;11624;11625;11626 11624 6 6151100 8114100 0 0 6069300 9004800 0 0 LELRDKA AQVERLLQAPLIDQPLELRDKAMLEVLYAT QAPLIDQPLELRDKAMLEVLYATGLRVSEL P L E K A M 1 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 2 1 0 843.48142 P0A8P8 P0A8P8 131 137 xerD Tyrosine recombinase XerD yes yes 2 0.0018096 74.415 By MS/MS By matching By matching By MS/MS 2 1 1 1 36900000 11751000 6000600 1111500 0 0 18036000 0 0 2615 151 2820 15335;15336;15337;15338;15339 11627 11627 1 54278000 35914000 9443900 0 0 25710000 0 0 LELVIQR LHGVGVSVVNALSQKLELVIQREGKIHRQI VVNALSQKLELVIQREGKIHRQIYEHGVPQ K L E Q R E 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 7 0 1 0 869.53345 P0AES6 P0AES6 130 136 gyrB DNA gyrase subunit B yes yes 2 3.562E-11 129.96 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 86451000 22360000 17570000 0 0 22229000 24292000 0 0 2616 239 2821 15340;15341;15342;15343;15344 11628;11629;11630;11631 11628 4 22360000 25833000 0 0 26815000 26910000 0 0 LENEIQTYR CQNTEYQQLLDIKIRLENEIQTYRSLLEGE LDIKIRLENEIQTYRSLLEGEGSSGGGGRG R L E Y R S 0 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 9 0 2 0 1164.5775 CON__P13645;CON__P02535-1 CON__P13645 442 450 yes no 2 5.0072E-109 202.28 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 392630000 27656000 45156000 0 0 146670000 173150000 0 0 + 2617 12 2822 15345;15346;15347;15348 11632;11633;11634 11634 3 27656000 46221000 0 0 176930000 191810000 0 0 LENQHFDEITK DEDVDYYVPVAEIEKLENQHFDEITKAGLK EIEKLENQHFDEITKAGLKNGN________ K L E T K A 0 0 1 1 0 1 2 0 1 1 1 1 0 1 0 0 1 0 0 0 0 0 11 0 2 0 1372.6623 P0ABI8 P0ABI8 646 656 cyoB Cytochrome bo(3) ubiquinol oxidase subunit 1 yes yes 3 0.00046511 65.842 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29779000 5861100 6306300 0 0 9880800 7730700 0 0 2618 202 2823 15349;15350;15351;15352 11635;11636;11637 11636 3 5861100 6455100 0 0 11919000 8563900 0 0 LENSLGGIK LTKKEALMRTRELEKLENSLGGIKDMGGLP TRELEKLENSLGGIKDMGGLPDALFVIDAD K L E I K D 0 0 1 0 0 0 1 2 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1 0 929.5182 P0A7V0 P0A7V0 144 152 rpsB 30S ribosomal protein S2 yes yes 2 6.8438E-06 95.531 By MS/MS By MS/MS By MS/MS 1 1 1 107490000 0 0 0 0 52114000 55373000 0 0 2619 128 2824 15353;15354;15355 11638;11639;11640 11638 3 0 0 0 0 62865000 61340000 0 0 LEPADDFRDEPVK FHEKLRELLTTLNLKLEPADDFRDEPVKLT LKLEPADDFRDEPVKLTA____________ K L E V K L 1 1 0 3 0 0 2 0 0 0 1 1 0 1 2 0 0 0 0 1 0 0 13 1 2 3 1529.7362 P24251 P24251 118 130 crl Sigma factor-binding protein Crl yes yes 3 0.001586 53.448 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32268000 9074300 8697200 0 0 5289600 9206600 0 0 2620 312 2825 15356;15357;15358;15359 11641;11642;11643 11642 3 9074300 8902400 0 0 6380800 10199000 0 0 LEQAEAER MLSGNSDLNEKLRERLEQAEAERTRAREAL NEKLRERLEQAEAERTRAREALRGHAAQLS R L E E R T 2 1 0 0 0 1 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 8 0 3 2 944.45632 P22523 P22523 993 1000 mukB Chromosome partition protein MukB yes yes 2 0.00379 67.032 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3165700 1007700 1317700 0 0 478460 361810 0 0 2621 300 2826 15360;15361;15362;15363 11644;11645;11646 11645 3 1007700 1348800 0 0 577170 400800 0 0 LEQILGQHR AYDEAVAKVFESLARLEQILGQHRYLTGNQ FESLARLEQILGQHRYLTGNQLTEADIRLW R L E H R Y 0 1 0 0 0 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1 0 1092.604 P42620 P42620 220 228 yqjG Glutathionyl-hydroquinone reductase YqjG yes yes 2;3 0.0012583 65.038 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 20119000 4789400 5831000 0 0 4313100 5185100 0 0 2622 367 2827 15364;15365;15366;15367;15368 11647;11648;11649;11650;11651 11651 5 4789400 5968600 0 0 5202900 5743900 0 0 LEQLNAP TLIQARDQLAKSGIALEQLNAPSATSCTSL QLAKSGIALEQLNAPSATSCTSLPLLAQYG A L E A P S 1 0 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 7 0 1 1 783.41267 P45550 P45550 228 234 yhfX Uncharacterized protein YhfX yes yes 1 0.0016994 115.83 By matching By matching By matching By MS/MS 1 1 1 1 23965000 2553500 1538400 0 0 4383800 15490000 0 0 2623 368 2828 15369;15370;15371;15372 11652 11652 0 15414000 9207200 0 0 6241200 22080000 0 0 LEREDLRYVHQLDNNA ______________________________ EREDLRYVHQLDNNASVMRYWFEEPYEAFV P L E N A S 1 2 2 2 0 1 2 0 1 0 3 0 0 0 0 0 0 0 1 1 0 0 16 2 2 0 1983.9763 P0A951 P0A951 12 27 speG Spermidine N(1)-acetyltransferase yes yes 3;4 3.1004E-14 86.378 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 80688000 2861700 3587800 0 0 54078000 20160000 0 0 2624 160 2829 15373;15374;15375;15376;15377;15378;15379 11653;11654;11655;11656;11657 11655 5 17275000 21473000 0 0 76990000 28738000 0 0 LESASFVDEK LPKDLRELCDLDSLKLESASFVDEKLRALH LDSLKLESASFVDEKLRALHSDILWSVKTR K L E E K L 1 0 0 1 0 0 2 0 0 0 1 1 0 1 0 2 0 0 0 1 0 0 10 0 2 1 1123.5397 P39387 P39387 47 56 yjiP Putative uncharacterized protein YjiP yes yes 2 0.00067321 77.058 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24516000 6299800 8621500 0 0 5322800 4272100 0 0 2625 363 2830 15380;15381;15382;15383 11658;11659 11658 2 6299800 8825000 0 0 6420900 4732500 0 0 LESFASEETR HAYTVDEHTIRVMLKLESFASEETRQRHPL RVMLKLESFASEETRQRHPLCVDVWPRLPS K L E T R Q 1 1 0 0 0 0 3 0 0 0 1 0 0 1 0 2 1 0 0 0 0 0 10 0 3 1 1167.5408 P27249 P27249 479 488 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 6.6084E-45 145.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26397000 0 0 0 0 0 26397000 0 0 2626 320 2831 15384;15385;15386;15387 11660;11661;11662;11663;11664 11661 5 0 0 0 0 0 29242000 0 0 LESGYLYLGSPVK DVMIGAGSLVPQNKRLESGYLYLGSPVKQI KRLESGYLYLGSPVKQIRPLSDEEKAGLRY R L E V K Q 0 0 0 0 0 0 1 2 0 0 3 1 0 0 1 2 0 0 2 1 0 0 13 0 1 1 1424.7551 P0A9W9 P0A9W9 136 148 yrdA Protein YrdA yes yes 2 1.1969E-84 181.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 155220000 32120000 33451000 0 0 42861000 46790000 0 0 2627 179 2832 15388;15389;15390;15391 11665;11666;11667;11668;11669 11665 5 32120000 34241000 0 0 51704000 51833000 0 0 LESLVEDLVNR ATGPKHMNIKVTRAKLESLVEDLVNRSIEP TRAKLESLVEDLVNRSIEPLKVALQDAGLS K L E N R S 0 1 1 1 0 0 2 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 11 0 2 0 1285.6878 P0A6Y8 P0A6Y8 305 315 dnaK Chaperone protein DnaK yes yes 2 3.8851E-113 200.05 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 259470000 59847000 62028000 0 0 59269000 78326000 0 0 2628 86 2833 15392;15393;15394;15395 11670;11671;11672;11673 11672 4 59847000 63492000 0 0 71497000 86767000 0 0 LESPFILLADKKISNIRE LSPYFINKPETGAVELESPFILLADKKISN PFILLADKKISNIREMLPVLEAVAKAGKPL E L E R E M 1 1 1 1 0 0 2 0 0 3 3 2 0 1 1 2 0 0 0 0 0 0 18 3 1 2 2085.1834 P0A6F5 P0A6F5 215 232 groL 60 kDa chaperonin yes yes 3;4 6.7634E-29 113.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 2 2 248130000 1670700 1722700 140650000 5149700 37538000 44808000 3080600 13514000 2629 68 2834 15396;15397;15398;15399;15400;15401;15402;15403;15404;15405;15406;15407;15408;15409 11674;11675;11676;11677;11678;11679;11680;11681;11682;11683 11675 9 25671000 26271000 1195100000 39042000 577940000 679130000 23709000 77552000 LETALKGEDKA LPADDKTAIESALTALETALKGEDKAAIEA ALTALETALKGEDKAAIEAKMQELAQVSQK A L E K A A 2 0 0 1 0 0 2 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 11 2 2 1 1173.6241 P0A6Y8 P0A6Y8 572 582 dnaK Chaperone protein DnaK yes yes 2;3 1.7001E-25 142 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 123370000 19247000 23199000 8539300 16671000 0 50497000 5216600 0 2630 86 2835 15410;15411;15412;15413;15414;15415;15416;15417;15418;15419;15420 11684;11685;11686;11687;11688 11687 4 116190000 138840000 72557000 126390000 0 71983000 40148000 0 LETALKGEDKAA LPADDKTAIESALTALETALKGEDKAAIEA LTALETALKGEDKAAIEAKMQELAQVSQKL A L E A A I 3 0 0 1 0 0 2 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 12 2 2 2 1244.6612 P0A6Y8 P0A6Y8 572 583 dnaK Chaperone protein DnaK yes yes 2;3 5.1211E-24 143.24 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 1 1641400000 18936000 15709000 533360000 511140000 0 84001000 477050000 1234100 2631 86 2836 15421;15422;15423;15424;15425;15426;15427;15428 11689;11690;11691;11692 11692 4 114310000 94017000 4531900000 3875200000 0 119740000 3671500000 7082500 LETIEGSK MPEGAEEGIRKGIYKLETIEGSKGKVQLLG IRKGIYKLETIEGSKGKVQLLGSGSILRHV K L E S K G 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 8 0 2 0 875.46001 P0AFG8 P0AFG8 717 724 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0020507 87.323 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4884300 0 2899600 0 0 0 1984700 0 0 2632 248 2837 15429;15430;15431;15432 11693;11694;11695;11696 11696 4 0 2968000 0 0 0 2198600 0 0 LEVGHSVR AQKVGELLTLLWDVKLEVGHSVRTLEECML TLLWDVKLEVGHSVRTLEECMLEGLSDLTV K L E V R T 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 2 0 0 8 0 1 0 895.48756 P27249 P27249 136 143 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0022122 85.212 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 74096000 22436000 21066000 2046500 0 13158000 12080000 1271500 2037000 2633 320 2838 15433;15434;15435;15436;15437;15438;15439 11697;11698;11699;11700 11697 4 22436000 21563000 17389000 0 15873000 13382000 9785400 11690000 LEVNEDR QQILSGELVPGKVIRLEVNEDRIVAVQ___ LVPGKVIRLEVNEDRIVAVQ__________ R L E D R I 0 1 1 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 2 0 873.41921 P63284-2;P63284 P63284-2 698 704 clpB Chaperone protein ClpB yes no 2 0.0041697 67.032 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 11157000 3305300 4392000 0 0 1813700 1646400 0 0 2634 393 2839 15440;15441;15442;15443 11701;11702 11702 2 3305300 4495600 0 0 2187800 1823800 0 0 LEVVRDKLA ADAAKKHLRPVARQPLEVVRDKLAAITDWT PVARQPLEVVRDKLAAITDWTAENVHHAIQ P L E L A A 1 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 9 2 1 0 1041.6182 P04805 P04805 388 396 gltX Glutamate--tRNA ligase yes yes 2 0.020563 58.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10778000 1676500 1475200 0 0 1910500 5716300 0 0 2635 45 2840 15444;15445;15446;15447 11703 11703 1 10120000 8829200 0 0 2720000 8148500 0 0 LEVVVNER ARECTLETLEEMLEKLEVVVNERREEESAA LEEMLEKLEVVVNERREEESAAAAEVEERT K L E E R R 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 8 0 2 0 956.5291 P0ACF8 P0ACF8 33 40 hns DNA-binding protein H-NS yes yes 2 9.5321E-35 159.2 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 2 2 979620000 285940000 237940000 3020900 0 214050000 238670000 0 0 2636 210 2841 15448;15449;15450;15451;15452;15453;15454;15455 11704;11705;11706;11707 11704 4 285940000 261800000 25668000 0 320230000 347310000 0 0 LEYDPNR DFKRNKDGIPAVVERLEYDPNRSANIALVL GIPAVVERLEYDPNRSANIALVLYKDGERR R L E N R S 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 7 0 1 1 905.4243 P60422 P60422 81 87 rplB 50S ribosomal protein L2 yes yes 2 0.0021205 97.071 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 1 1651600000 353860000 473590000 4034400 5536600 401560000 391210000 9404700 12351000 2637 379 2842 15456;15457;15458;15459;15460;15461;15462;15463;15464;15465 11708;11709;11710;11711 11708 4 379860000 516450000 34280000 41976000 484410000 433370000 72380000 70878000 LEYDPNRSANIALVLYK DFKRNKDGIPAVVERLEYDPNRSANIALVL YDPNRSANIALVLYKDGERRYILAPKGLKA R L E Y K D 2 1 2 1 0 0 1 0 0 1 3 1 0 0 1 1 0 0 2 1 0 0 17 1 1 3 1978.0524 P60422 P60422 81 97 rplB 50S ribosomal protein L2 yes yes 2;3 0.00013792 59.862 By MS/MS By MS/MS 1 2 0 0 0 0 0 0 0 0 0 2638 379 2843 15466;15467;15468 11712;11713;11714 11713 30 0 0 0 0 0 0 0 0 0 LFAEQVR VMNDAPAVASTDYMKLFAEQVRTYVPADDY VASTDYMKLFAEQVRTYVPADDYRVLGTDG K L F V R T 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 7 0 1 1 861.47085 P0AFG8 P0AFG8 807 813 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0045104 49.358 By MS/MS By MS/MS By MS/MS 1 1 1 9040200 0 5276500 0 0 3763600 0 0 0 2639 248 2844 15469;15470;15471 11715;11716;11717 11715 3 0 5401100 0 0 4540100 0 0 0 LFAGNATPELAQR ______________________________ MKLFAGNATPELAQRIANRLYTSLGDAAVG K L F Q R I 3 1 1 0 0 1 1 1 0 0 2 0 0 1 1 0 1 0 0 0 0 0 13 0 1 4 1386.7256 P0A717 P0A717 6 18 prs Ribose-phosphate pyrophosphokinase yes yes 2 3.1627E-184 233.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 240920000 59245000 49569000 0 0 66401000 65704000 0 0 2640 91 2845 15472;15473;15474;15475 11718;11719;11720;11721;11722 11721 5 59245000 50739000 0 0 80100000 72786000 0 0 LFAITDHGPDMEDAPHHWHFINMR TLSDYIAQAKQKGIKLFAITDHGPDMEDAP DMEDAPHHWHFINMRIWPRVVDGVGILRGI K L F M R I 2 1 1 3 0 0 1 1 4 2 1 0 2 2 2 0 1 1 0 0 0 0 24 0 1 4 2886.3119 P75914 P75914 34 57 ycdX Probable phosphatase YcdX yes yes 5 0.0031453 27.055 By matching By MS/MS 1 1 11699000 5588500 6110600 0 0 0 0 0 0 2641 412 2846 15476;15477 11723 11723 1 5588500 6254800 0 0 0 0 0 0 LFALDAASGK IKVGDTLYLCTAHQRLFALDAASGKEKWHY TAHQRLFALDAASGKEKWHYDPELKTNESF R L F G K E 3 0 0 1 0 0 0 1 0 0 2 1 0 1 0 1 0 0 0 0 0 0 10 0 0 3 991.53385 P15877 P15877 236 245 gcd Quinoprotein glucose dehydrogenase yes yes 2 0.0042143 55.461 By matching By MS/MS By MS/MS 1 1 1 13243000 0 4338000 0 0 4181200 4724100 0 0 2642 284 2847 15478;15479;15480 11724;11725 11725 2 0 4440300 0 0 5043800 5233300 0 0 LFALDAASGKEK IKVGDTLYLCTAHQRLFALDAASGKEKWHY HQRLFALDAASGKEKWHYDPELKTNESFQH R L F E K W 3 0 0 1 0 0 1 1 0 0 2 2 0 1 0 1 0 0 0 0 0 0 12 1 1 3 1248.6714 P15877 P15877 236 247 gcd Quinoprotein glucose dehydrogenase yes yes 2 0.0048209 53.493 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 2643 284 2848 15481;15482;15483;15484 11726;11727;11728 11727 23 0 0 0 0 0 0 0 0 0 LFALHDHNEQQK RHTGLLLQHFGINARLFALHDHNEQQKAET NARLFALHDHNEQQKAETLLAKLQEGQNIA R L F Q K A 1 0 1 1 0 2 1 0 2 0 2 1 0 1 0 0 0 0 0 0 0 0 12 0 1 1 1478.7266 P67087 P67087 62 73 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 3 4.5405E-08 84.169 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 88928000 24535000 27774000 0 0 16237000 20381000 0 0 2644 400 2849 15485;15486;15487;15488 11729;11730;11731 11730 3 24535000 28430000 0 0 19587000 22578000 0 0 LFDGMSRVKKQQTVYGPLME VSGDGSHFQVIAVGELFDGMSRVKKQQTVY SRVKKQQTVYGPLMEYIADNRIHAVSIKAY E L F M E Y 0 1 0 1 0 2 1 2 0 0 2 2 2 1 1 1 1 0 1 2 0 0 20 3 0 1 2326.1814 P0A9W6 P0A9W6 36 55 ibaG Acid stress protein IbaG yes yes 3;4 0.00034187 38.417 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 2 4 573790000 13449000 14047000 74072000 99641000 12291000 22908000 58412000 278970000 2645 178 2850;2851;2852 15489;15490;15491;15492;15493;15494;15495;15496;15497;15498;15499;15500;15501;15502;15503;15504;15505;15506;15507;15508 11732;11733;11734;11735;11736;11737 11737 168;169 6 206640000 214220000 629380000 755440000 189240000 347200000 449560000 1600900000 LFDRRLPE WGHRRDVAGYAAGLELFDRRLPELMSLLRD GYAAGLELFDRRLPELMSLLRDDDILILTA E L F P E L 0 2 0 1 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 8 2 0 1 1044.5716 P0A6K6 P0A6K6 324 331 deoB Phosphopentomutase yes yes 2 0.0060807 70.912 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35995000 8125400 12620000 0 0 8440500 6808900 0 0 2646 75 2853 15509;15510;15511;15512 11738;11739 11738 2 124840000 192460000 0 0 129950000 103200000 0 0 LFEEFNR PTGNLDDALSEGILRLFEEFNRVGVTVLMA ALSEGILRLFEEFNRVGVTVLMATHDINLI R L F N R V 0 1 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 7 0 2 0 953.46068 P0A9R7 P0A9R7 179 185 ftsE Cell division ATP-binding protein FtsE yes yes 2 1.1E-45 170.43 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 113190000 25653000 24022000 0 4071100 30968000 28477000 0 0 2647 174 2854 15513;15514;15515;15516;15517 11740;11741;11742;11743 11743 4 25653000 24589000 0 30865000 37357000 31547000 0 0 LFETSENGLDYFTSVPAR DEVGGKLRFGDPGVRLFETSENGLDYFTSV TSENGLDYFTSVPARFQPQDGKWRIAPYYH R L F A R F 1 1 1 1 0 0 2 1 0 0 2 0 0 2 1 2 2 0 1 1 0 0 18 0 2 2 2044.9742 P33602 P33602 785 802 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 1.9905E-52 182.07 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 77242000 17960000 21293000 0 0 18070000 19919000 0 0 2648 345 2855 15518;15519;15520;15521 11744;11745;11746 11745 3 17960000 21796000 0 0 21798000 22066000 0 0 LFFAGEHTIR TPGPSIPGAPQPIPRLFFAGEHTIRNYPAT QPIPRLFFAGEHTIRNYPATVHGALLSGLR R L F I R N 1 1 0 0 0 0 1 1 1 1 1 0 0 2 0 0 1 0 0 0 0 0 10 0 1 1 1189.6244 LSD1-FL-His LSD1-FL-His 798 807 yes yes 2;3 6.9103E-151 262.9 By MS/MS By MS/MS By MS/MS By MS/MS 29 25 19 11 31374000000 2807700000 2761100000 0 0 13487000000 12318000000 0 0 2649 24 2856;2857 15522;15523;15524;15525;15526;15527;15528;15529;15530;15531;15532;15533;15534;15535;15536;15537;15538;15539;15540;15541;15542;15543;15544;15545;15546;15547;15548;15549;15550;15551;15552;15553;15554;15555;15556;15557;15558;15559;15560;15561;15562;15563;15564;15565;15566;15567;15568;15569;15570;15571;15572;15573;15574;15575;15576;15577;15578;15579;15580;15581;15582;15583;15584;15585;15586;15587;15588;15589;15590;15591;15592;15593;15594;15595;15596;15597;15598;15599;15600;15601;15602;15603;15604;15605 11747;11748;11749;11750;11751;11752;11753;11754;11755;11756;11757;11758;11759;11760;11761;11762;11763;11764;11765;11766;11767;11768;11769;11770;11771;11772;11773;11774;11775;11776;11777;11778;11779;11780;11781;11782;11783;11784;11785;11786;11787;11788;11789;11790;11791;11792;11793;11794;11795;11796;11797;11798;11799;11800;11801;11802;11803;11804;11805;11806;11807;11808;11809;11810;11811;11812;11813;11814;11815;11816;11817;11818;11819;11820;11821;11822;11823;11824;11825 11810 43 75 3160600000 2831300000 0 0 16596000000 13820000000 0 0 LFFAGEHTIRNYPATVHGALLSGLR TPGPSIPGAPQPIPRLFFAGEHTIRNYPAT NYPATVHGALLSGLREAGRIADQFLGAMYT R L F L R E 3 2 1 0 0 0 1 3 2 1 4 0 0 2 1 1 2 0 1 1 0 0 25 1 1 4 2739.4609 LSD1-FL-His LSD1-FL-His 798 822 yes yes 4 1.3534E-05 42.806 By MS/MS By matching By MS/MS 1 1 1 29610000 8685200 0 0 0 11156000 9769300 0 0 2650 24 2858 15606;15607;15608 11826;11827;11828 11826 3 8685200 0 0 0 13457000 10822000 0 0 LFGSIGTR LETVTIASKAGDEGKLFGSIGTRDIADAVT KAGDEGKLFGSIGTRDIADAVTAAGVEVAK K L F T R D 0 1 0 0 0 0 0 2 0 1 1 0 0 1 0 1 1 0 0 0 0 0 8 0 0 0 849.47085 P0A7R1 P0A7R1 90 97 rplI 50S ribosomal protein L9 yes yes 2 0.0020507 87.323 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49197000 11055000 12476000 0 0 10717000 14948000 0 0 2651 119 2859 15609;15610;15611;15612 11829;11830;11831;11832 11830 4 11055000 12771000 0 0 12928000 16560000 0 0 LFIVQARPETVR RPMDIEWAKDGHTGKLFIVQARPETVRSRG TGKLFIVQARPETVRSRGQVMERYTLHSQG K L F V R S 1 2 0 0 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 12 1 1 2 1427.8249 P23538 P23538 330 341 ppsA Phosphoenolpyruvate synthase yes yes 3 0.014094 35.737 By MS/MS By MS/MS By matching 1 1 1 11912000 3651800 3743600 0 0 4516300 0 0 0 2652 303 2860 15613;15614;15615 11833;11834 11834 0 3651800 3832000 0 0 5448000 0 0 0 LFNELGPR RLAFARTRDNEIVAKLFNELGPRFASRAGG DNEIVAKLFNELGPRFASRAGGYTRILKCG K L F P R F 0 1 1 0 0 0 1 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 8 0 1 1 944.50797 P0AG44 P0AG44 79 86 rplQ 50S ribosomal protein L17 yes yes 2 1.6158E-58 177.71 By MS/MS By MS/MS By matching By MS/MS 2 3 3 3 312260000 65219000 73719000 0 0 85644000 87674000 0 0 2653 257 2861 15616;15617;15618;15619;15620;15621;15622;15623;15624;15625;15626 11835;11836;11837 11835 3 97393000 97395000 0 0 110920000 106630000 0 0 LFPVSDEINWQK AIEVDEALLAQTLDKLFPVSDEINWQKVAA LDKLFPVSDEINWQKVAAAVALTRRISVIS K L F Q K V 0 0 1 1 0 1 1 0 0 1 1 1 0 1 1 1 0 1 0 1 0 0 12 0 1 1 1474.7456 P04993 P04993 144 155 recD RecBCD enzyme subunit RecD yes yes 2 0.010322 52.79 By MS/MS By MS/MS By matching By matching 1 1 1 1 323900000 10219000 7893700 0 0 293710000 12081000 0 0 2654 46 2862 15627;15628;15629;15630 11838;11839 11839 2 10219000 8080000 0 0 354300000 13383000 0 0 LFQYLYR YKATSSARLLSAVRRLFQYLYREKFREDDP RLLSAVRRLFQYLYREKFREDDPSAHLASP R L F Y R E 0 1 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 7 0 0 0 1001.5335 P0A8P8 P0A8P8 82 88 xerD Tyrosine recombinase XerD yes yes 2 3.0843E-45 168.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 196510000 53784000 46088000 0 0 47890000 48747000 0 0 2655 151 2863 15631;15632;15633;15634 11840;11841;11842;11843 11843 4 53784000 47176000 0 0 57770000 54001000 0 0 LFSYTDTQISR VPGLDFTNDPLLQGRLFSYTDTQISRLGGP LQGRLFSYTDTQISRLGGPNFHEIPINRPT R L F S R L 0 1 0 1 0 1 0 0 0 1 1 0 0 1 0 2 2 0 1 0 0 0 11 0 0 0 1329.6565 P21179 P21179 412 422 katE Catalase HPII yes yes 2 6.2596E-32 166.33 By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 137430000 38528000 37540000 0 0 34359000 27003000 0 0 2656 293 2864 15635;15636;15637;15638;15639 11844;11845;11846 11844 3 38528000 38426000 0 0 41447000 29913000 0 0 LFVTNVDDTRLDDIAA QIAAILNIGQRAKHPLFVTNVDDTRLDDIA FVTNVDDTRLDDIAAWTYRAPVEDQARLGF P L F A A W 2 1 1 4 0 0 0 0 0 1 2 0 0 1 0 0 2 0 0 2 0 0 16 1 0 1 1776.8894 P33602 P33602 429 444 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0064193 34.378 By MS/MS 1 994180 0 0 0 0 0 994180 0 0 2657 345 2865 15640 11847 11847 1 0 0 0 0 0 1417200 0 0 LFWLSQTPFEQR RERSPSFGEYYSHPRLFWLSQTPFEQRHIV HPRLFWLSQTPFEQRHIVDGFSFELSKVVR R L F Q R H 0 1 0 0 0 2 1 0 0 0 2 0 0 2 1 1 1 1 0 0 0 0 12 0 1 1 1550.7882 P21179 P21179 510 521 katE Catalase HPII yes yes 2 0 250.96 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 238120000 74816000 82263000 0 0 37202000 43836000 0 0 2658 293 2866 15641;15642;15643;15644 11848;11849;11850;11851 11851 1 74816000 84204000 0 0 44876000 48560000 0 0 LGADILR KSIGNTVSPQDVMNKLGADILRLWVASTDY SPQDVMNKLGADILRLWVASTDYTGEMAVS K L G L R L 1 1 0 1 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 756.44939 P00956 P00956 620 626 ileS Isoleucine--tRNA ligase yes yes 2 0.0062417 60.799 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 28292000 5107600 4802500 0 0 3174400 10769000 0 4438500 2659 32 2867 15645;15646;15647;15648;15649;15650;15651;15652 11852 11852 1 15213000 15244000 0 0 3829300 14191000 0 25472000 LGAMLDQK DFCNLDVNDTAAFSRLGAMLDQKNRITINY DTAAFSRLGAMLDQKNRITINYFAMPPSTF R L G Q K N 1 0 0 1 0 1 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 8 0 0 1 874.45824 P0AC53 P0AC53 102 109 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.0066274 40.067 By MS/MS 1 0 0 0 0 0 0 0 0 0 2660 205 2868 15653 11853 11853 1 0 0 0 0 0 0 0 0 LGAPSNHTHLALSR GLAGASLRLFPDRWRLGAPSNHTHLALSRQ RLGAPSNHTHLALSRQSFEPLRIQRLGQEQ R L G S R Q 2 1 1 0 0 0 0 1 2 0 3 0 0 0 1 2 1 0 0 0 0 0 14 0 0 3 1472.7848 P23305 P23305 132 145 yigA Uncharacterized protein YigA yes yes 4 6.8048E-05 66.285 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 52942000 16464000 15994000 0 0 9079100 11404000 0 0 2661 301 2869 15654;15655;15656;15657 11854;11855;11856 11856 3 16464000 16372000 0 0 10952000 12633000 0 0 LGASLDGR FLKRMRTGFPYIQLKLGASLDGRTAMASGE FPYIQLKLGASLDGRTAMASGESQWITSPQ K L G G R T 1 1 0 1 0 0 0 2 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 0 1 787.41882 P25539 P25539 153 160 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 0.0017196 75.109 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 38725000 4820500 3707700 0 0 7461800 22735000 0 0 2662 315 2870 15658;15659;15660;15661;15662;15663;15664 11857;11858;11859 11857 2 29099000 22190000 0 0 9001200 30467000 0 0 LGASVVGFSDSANTSLGK ASTRTRLSFETSMHRLGASVVGFSDSANTS SVVGFSDSANTSLGKKGETLADTISVISTY R L G G K K 2 0 1 1 0 0 0 3 0 0 2 1 0 1 0 4 1 0 0 2 0 0 18 0 0 2 1708.8632 P0A786 P0A786 67 84 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.00073874 50.467 By MS/MS By matching By MS/MS 1 1 1 19575000 5906000 6597900 0 0 7071600 0 0 0 2663 97 2871 15665;15666;15667 11860;11861 11861 2 5906000 6753600 0 0 8530400 0 0 0 LGDAKPAGEQQR AKSASAKPAEKPSRRLGDAKPAGEQQRRRR SRRLGDAKPAGEQQRRRRPRKPAAAQ____ R L G Q R R 2 1 0 1 0 2 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 12 1 1 3 1268.6473 P25888 P25888 432 443 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 5.753E-07 84.605 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 389560000 152440000 148960000 0 0 49747000 38413000 0 0 2664 318 2872 15668;15669;15670;15671;15672;15673;15674;15675 11862;11863;11864;11865;11866 11862 5 152440000 152480000 0 0 60010000 42553000 0 0 LGDLGLGR IKPANVFITATGIVKLGDLGLGRFFSSETT TATGIVKLGDLGLGRFFSSETTAAHSLVGT K L G G R F 0 1 0 1 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 799.4552 GST-Nek6 GST-Nek6 419 426 yes yes 2 6.1581E-89 190.49 By MS/MS By MS/MS 1 1 946880000 0 0 0 0 450030000 496840000 0 0 2665 23 2873 15676;15677 11867;11868;11869 11869 3 0 0 0 0 542880000 550390000 0 0 LGDLPTSGQIR VFDGAKEAEIKELLKLGDLPTSGQIRLYDG ELLKLGDLPTSGQIRLYDGRTGEQFERPVT K L G I R L 0 1 0 1 0 1 0 2 0 1 2 0 0 0 1 1 1 0 0 0 0 0 11 0 0 1 1155.6248 P0A8V2 P0A8V2 1201 1211 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.00016027 82.749 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 30154000 7313300 6549700 0 0 8151100 8139500 0 0 2666 154 2874 15678;15679;15680;15681;15682;15683 11870;11871;11872;11873 11870 4 7313300 6704300 0 0 10274000 9453400 0 0 LGDWTFDER ______________________________ SAPIARLGDWTFDERVAEVFPDMIQRSVPG R L G E R V 0 1 0 2 0 0 1 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 9 0 1 0 1137.5091 P76290 P76290 15 23 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2 0.001753 54.416 By MS/MS 1 0 0 0 0 0 0 0 0 0 2667 421 2875 15684 11874 11874 1 0 0 0 0 0 0 0 0 LGEFAPTR QHVPVFVTDEMVGHKLGEFAPTRTYRGHAA DEMVGHKLGEFAPTRTYRGHAADKKAKKK_ K L G T R T 1 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 8 0 1 2 889.46577 P0A7U3 P0A7U3 71 78 rpsS 30S ribosomal protein S19 yes yes 2 1.3224E-09 109.01 By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 181410000 52705000 58035000 0 0 0 68394000 2278400 0 2668 126 2876 15685;15686;15687;15688;15689 11875;11876 11875 2 52705000 59405000 0 0 0 75766000 17535000 0 LGEFTMPEHK RSPEWSAFGIRPPLRLGEFTMPEHKFVTLE RPPLRLGEFTMPEHKFVTLEDTPLIGVTQS R L G H K F 0 0 0 0 0 0 2 1 1 0 1 1 1 1 1 0 1 0 0 0 0 0 10 0 2 1 1187.5645 P0ACI0 P0ACI0 120 129 rob Right origin-binding protein yes yes 2;3 1.6486E-37 154.28 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 326550000 94434000 78586000 0 0 69359000 84169000 0 0 2669 211 2877 15690;15691;15692;15693;15694;15695;15696;15697 11877;11878;11879;11880;11881;11882;11883;11884 11878 8 94434000 80441000 0 0 83667000 93241000 0 0 LGEGDKVVSLIVPR VRAMGCNTTGVRGIRLGEGDKVVSLIVPRG RLGEGDKVVSLIVPRGDGAILTATQNGYGK R L G P R G 0 1 0 1 0 0 1 2 0 1 2 1 0 0 1 1 0 0 0 3 0 0 14 1 1 1 1480.8613 P0AES4 P0AES4 726 739 gyrA DNA gyrase subunit A yes yes 3 1.8199E-05 57.679 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 14400000 0 3975800 0 0 5540300 4883900 0 0 2670 238 2878 15698;15699;15700;15701 11885;11886;11887 11885 2 0 4069600 0 0 6683300 5410300 0 0 LGELLEALK TFNVGSFASGKETMKLGELLEALKQTYCGP GKETMKLGELLEALKQTYCGPIGAEYMHIT K L G L K Q 1 0 0 0 0 0 2 1 0 0 4 1 0 0 0 0 0 0 0 0 0 0 9 0 2 1 984.58555 P0AFG3 P0AFG3 153 161 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 7.9114E-28 152.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 287640000 78104000 64638000 0 0 70472000 74430000 0 0 2671 246 2879 15702;15703;15704;15705 11888;11889;11890;11891 11888 4 78104000 66164000 0 0 85011000 82451000 0 0 LGEPDAQGR NEQGHVCGIRFLRTRLGEPDAQGRRRPVPV RFLRTRLGEPDAQGRRRPVPVEGSEFVMPA R L G G R R 1 1 0 1 0 1 1 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 9 0 1 2 941.45666 P37127 P37127 550 558 aegA Protein AegA yes yes 2 0.0020266 81.548 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9275100 2858400 3333200 0 0 2030600 1053000 0 0 2672 355 2880 15706;15707;15708;15709 11892;11893;11894 11892 3 2858400 3411800 0 0 2449600 1166500 0 0 LGFAIAHALDNSAPAVDGIEPELQSK IAAWTYRAPVEDQARLGFAIAHALDNSAPA SAPAVDGIEPELQSKIDVIVQALAGAKKPL R L G S K I 5 0 1 2 0 1 2 2 1 2 3 1 0 1 2 2 0 0 0 1 0 0 26 0 2 7 2662.3602 P33602 P33602 457 482 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 4.0653E-41 112.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 414610000 98981000 92952000 0 0 87319000 135360000 0 0 2673 345 2881 15710;15711;15712;15713 11895;11896;11897;11898 11897 4 98981000 95146000 0 0 105330000 149940000 0 0 LGFPVVVHGVSEDPTR KQANLTPLLAILLHKLGFPVVVHGVSEDPT GFPVVVHGVSEDPTRVLTETIFELMGITPT K L G T R V 0 1 0 1 0 0 1 2 1 0 1 0 0 1 2 1 1 0 0 4 0 0 16 0 1 2 1707.8944 P30177 P30177 108 123 ybiB Uncharacterized protein YbiB yes yes 3 5.805E-05 63.918 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 165140000 45692000 34895000 0 0 44571000 39981000 0 0 2674 332 2882 15714;15715;15716;15717 11899;11900;11901;11902 11899 4 45692000 35719000 0 0 53766000 44290000 0 0 LGFQLIPEEDE ELWEAIEAGDFPEYELGFQLIPEEDEFKFD PEYELGFQLIPEEDEFKFDFDLLDPTKLIP E L G D E F 0 0 0 1 0 1 3 1 0 1 2 0 0 1 1 0 0 0 0 0 0 0 11 0 2 1 1288.6187 P21179 P21179 336 346 katE Catalase HPII yes yes 2 0.0017166 71.877 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 21142000 3528000 5806300 1535700 0 3096000 0 2101000 5074800 2675 293 2883 15718;15719;15720;15721;15722;15723 11903 11903 1 54207000 88547000 13048000 0 47666000 0 16170000 29123000 LGGAEIAR MRLGAKGIKVEVSGRLGGAEIARTEWYREG KVEVSGRLGGAEIARTEWYREGRVPLHTLR R L G A R T 2 1 0 0 0 0 1 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 1 2 785.43955 P0A7V3 P0A7V3 157 164 rpsC 30S ribosomal protein S3 yes yes 2 1.7647E-07 120.49 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 212080000 53348000 46846000 1442000 1770300 51164000 53988000 3523000 0 2676 129 2884 15724;15725;15726;15727;15728;15729;15730 11904;11905;11906;11907 11905 4 53348000 47951000 12253000 13421000 61720000 59806000 27114000 0 LGGNSLLDLVVFGR AVGEIACVSVHGANRLGGNSLLDLVVFGRA RLGGNSLLDLVVFGRAAGLHLQESIAEQGA R L G G R A 0 1 1 1 0 0 0 3 0 0 4 0 0 1 0 1 0 0 0 2 0 0 14 0 0 0 1458.8195 P0AC41 P0AC41 400 413 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 4.0923E-29 114.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61492000 0 22118000 0 0 0 39374000 0 0 2677 203 2885 15731;15732;15733;15734 11908;11909;11910;11911 11910 4 0 22640000 0 0 0 43617000 0 0 LGGPNFHEIPINRPTCPYHNFQR LQGRLFSYTDTQISRLGGPNFHEIPINRPT IPINRPTCPYHNFQRDGMHRMGIDTNPANY R L G Q R D 0 2 3 0 1 1 1 2 2 2 1 0 0 2 4 0 1 0 1 0 0 0 23 1 1 4 2763.3452 P21179 P21179 423 445 katE Catalase HPII yes yes 4;5 3.3353E-47 134.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 224180000 66486000 50515000 0 0 59840000 47342000 0 0 2678 293 2886 15735;15736;15737;15738;15739 11912;11913;11914;11915;11916;11917 11912 6 66486000 51707000 0 0 72185000 52444000 0 0 LGHFTVNP HDAYGYFEKQFGLTPLGHFTVNPEIQPGAQ KQFGLTPLGHFTVNPEIQPGAQRLHEIRTQ P L G N P E 0 0 1 0 0 0 0 1 1 0 1 0 0 1 1 0 1 0 0 1 0 0 8 0 0 0 883.4552 P39172 P39172 222 229 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 1.7208E-07 121.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 34074000 6117400 6218300 0 0 12540000 9197500 0 0 2679 361 2887 15740;15741;15742;15743;15744 11918;11919;11920 11919 2 36928000 37216000 0 0 17854000 23348000 0 0 LGHGVWDLMFER PASRPVTKFEQRGHRLGHGVWDLMFERVK_ GHRLGHGVWDLMFERVK_____________ R L G E R V 0 1 0 1 0 0 1 2 1 0 2 0 1 1 0 0 0 1 0 1 0 0 12 0 1 0 1458.7078 P0A8I5 P0A8I5 226 237 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2;3 1.8473E-45 182.64 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 3 994620000 327270000 294270000 0 0 185500000 187580000 0 0 2680 144 2888;2889 15745;15746;15747;15748;15749;15750;15751;15752;15753;15754;15755 11921;11922;11923;11924;11925;11926;11927;11928;11929;11930;11931;11932 11922 138 12 331960000 301210000 0 0 223770000 207790000 0 0 LGIHHIK IARETLEIYSPLAHRLGIHHIKTELEELGF IYSPLAHRLGIHHIKTELEELGFEALYPNR R L G I K T 0 0 0 0 0 0 0 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 7 0 0 0 816.49701 P0AG24 P0AG24 173 179 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT;GTP pyrophosphokinase;Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase yes yes 2 0.0079768 58.551 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6405600 1907000 1962700 0 0 1132800 1403000 0 0 2681 254 2890 15756;15757;15758;15759 11933 11933 1 1907000 2009100 0 0 1366600 1554200 0 0 LGIKTVAVHSSADRDLKHVLLADE NRGEIALRILRACKELGIKTVAVHSSADRD SSADRDLKHVLLADETVCIGPAPSVKSYLN E L G D E T 3 1 0 3 0 0 1 1 2 1 4 2 0 0 0 2 1 0 0 3 0 0 24 3 0 3 2586.4129 P24182 P24182 24 47 accC Biotin carboxylase yes yes 4 0.023143 12.875 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 156270000 0 6424100 9195300 11944000 16860000 5388400 17396000 89063000 2682 309 2891 15760;15761;15762;15763;15764;15765;15766 11934 11934 1 0 97968000 78131000 90553000 259570000 81670000 133880000 511120000 LGIQAFEPVLIEGK REHPVLLNRAPTLHRLGIQAFEPVLIEGKA RLGIQAFEPVLIEGKAIQLHPLVCAAYNAD R L G G K A 1 0 0 0 0 1 2 2 0 2 2 1 0 1 1 0 0 0 0 1 0 0 14 0 2 2 1512.8552 P0A8T7 P0A8T7 432 445 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.645E-18 125.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 134520000 45838000 29597000 0 0 26259000 32827000 0 0 2683 153 2892 15767;15768;15769;15770 11935;11936;11937;11938 11936 4 45838000 30295000 0 0 31677000 36365000 0 0 LGKVQMLAQAAEEHPLHGGTGIAHTR LAVVDAEGHMTRLRRLGKVQMLAQAAEEHP EEHPLHGGTGIAHTRWATHGEPSEVNAHPH R L G T R W 4 1 0 0 0 2 2 4 3 1 3 1 1 0 1 0 2 0 0 1 0 0 26 1 2 5 2721.4133 P17169 P17169 49 74 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 5;6 9.5818E-08 46.678 By MS/MS By MS/MS By matching 2 2 1 52434000 29094000 19106000 0 0 0 4234400 0 0 2684 288 2893 15771;15772;15773;15774;15775 11939;11940;11941 11941 3 29094000 19557000 0 0 0 4690800 0 0 LGLLEQR AVADDIKLVDWLQQRLGLLEQRDTAMLHRL LVDWLQQRLGLLEQRDTAMLHRLLHDIEKN R L G Q R D 0 1 0 0 0 1 1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 827.4865 P37005 P37005 204 210 lasT Uncharacterized tRNA/rRNA methyltransferase LasT yes yes 2 0.0043662 65.803 By MS/MS 1 14533000 0 0 0 0 14533000 0 0 0 2685 353 2894 15776 11942 11942 1 0 0 0 0 17531000 0 0 0 LGLWQQDKVA NAYRFRGHQHANLDPLGLWQQDKVADLDPS ANLDPLGLWQQDKVADLDPSFHDLTEADFQ P L G V A D 1 0 0 1 0 2 0 1 0 0 2 1 0 0 0 0 0 1 0 1 0 0 10 1 0 0 1156.6241 P0AFG3 P0AFG3 112 121 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.015112 54.776 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14588000 553250 372780 0 0 9232500 4429400 0 0 2686 246 2895 15777;15778;15779;15780 11943 11943 1 3339700 2231100 0 0 13144000 6314100 0 0 LGMINEFHK VRDESHCYPSGWQARLGMINEFHKQGSAFY SGWQARLGMINEFHKQGSAFYFGLFDPDEK R L G H K Q 0 0 1 0 0 0 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 9 0 1 0 1087.5485 P0A948 P0A948 63 71 rimJ Ribosomal-protein-alanine acetyltransferase yes yes 3 0.0054874 45.161 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31669000 10126000 6911900 0 0 7354300 7276700 0 0 2687 159 2896 15781;15782;15783;15784 11944;11945;11946 11944 3 10126000 7075000 0 0 8871500 8061000 0 0 LGPEEITADIPNVGEAALSK TIHIQELACVSRDTKLGPEEITADIPNVGE ITADIPNVGEAALSKLDESGIVYIGAEVTG K L G S K L 3 0 1 1 0 0 3 2 0 2 2 1 0 0 2 1 1 0 0 1 0 0 20 0 3 5 2023.0474 P0A8V2 P0A8V2 845 864 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 3.5282E-25 105.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23267000 4274800 5777200 0 0 5999600 7215100 0 0 2688 154 2897 15785;15786;15787;15788 11947;11948;11949;11950 11950 4 4274800 5913500 0 0 7237400 7992700 0 0 LGPNADE TLTGRISHGQVDLSELGPNADELLSKVEHI HGQVDLSELGPNADELLSKVEHIQILACGT E L G D E L 1 0 1 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 7 0 0 2 714.31843 P17169 P17169 282 288 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 1 5.4221E-18 114.72 By matching By MS/MS By MS/MS By matching 1 1 1 1 155760000 41184000 59099000 0 0 25952000 29530000 0 0 2689 288 2898 15789;15790;15791;15792 11951;11952 11952 1 632770000 901270000 0 0 399560000 447570000 0 0 LGPNADELLSKVE TLTGRISHGQVDLSELGPNADELLSKVEHI SELGPNADELLSKVEHIQILACGTSYNSGM E L G V E H 1 0 1 1 0 0 2 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 13 1 1 2 1383.7246 P17169 P17169 282 294 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.0073782 41.283 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31351000 0 0 7901900 10346000 0 0 6073400 7029200 2690 288 2899 15793;15794;15795;15796 11953;11954 11953 2 0 0 67141000 78443000 0 0 46743000 40339000 LGQGAHVE EKQLHKLVDVLRVSELGQGAHVEREIMLVK DVLRVSELGQGAHVEREIMLVKIQASGYGR E L G V E R 1 0 0 0 0 1 1 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 0 1 809.40317 P00894 P00894 76 83 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 0.0039438 76.847 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10138000 0 0 1780000 2042600 0 0 2505400 3809600 2691 30 2900 15797;15798;15799;15800 11955 11955 1 0 0 15124000 15486000 0 0 19282000 21862000 LGQGAHVERE EKQLHKLVDVLRVSELGQGAHVEREIMLVK LRVSELGQGAHVEREIMLVKIQASGYGRDE E L G R E I 1 1 0 0 0 1 2 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 10 1 1 1 1094.5469 P00894 P00894 76 85 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 3 0.00030608 73.499 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 115290000 3166200 2655300 18911000 24762000 1883400 1521000 24324000 38062000 2692 30 2901 15801;15802;15803;15804;15805;15806;15807;15808 11956;11957;11958 11958 3 48648000 40493000 160690000 187730000 28996000 23052000 187210000 218430000 LGQTLYYAR NAEKAMNNLKDGLAKLGQTLYYARDVQINL KDGLAKLGQTLYYARDVQINLPGALFVPNS K L G A R D 1 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 1 0 2 0 0 0 9 0 0 1 1083.5713 P76104 P76104 464 472 ydcP Uncharacterized protease YdcP yes yes 2 2.456E-05 75.738 By MS/MS By MS/MS 1 2 0 0 0 0 0 0 0 0 0 2693 416 2902 15809;15810;15811 11959;11960;11961 11959 3 0 0 0 0 0 0 0 0 LGRQQKKDNADSRGE VVGLVAGVSVMAVRELGRQQKKDNADSRGE LGRQQKKDNADSRGE_______________ E L G G E - 1 2 1 2 0 2 1 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 15 4 0 1 1700.8554 P69741 P69741 358 372 hybO Hydrogenase-2 small chain yes yes 3;4 0.0016783 35.35 By matching By MS/MS By matching 1 4 1 3994100 0 0 244160 0 0 0 3501400 248580 2694 403 2903 15812;15813;15814;15815;15816;15817 11962;11963;11964;11965;11966;11967;11968 11965 7 0 0 2074600 0 0 0 26947000 1426600 LGTKDDLLE RATVMRETCHEVLKELGTKDDLLEVAMELE HEVLKELGTKDDLLEVAMELENIALNDPYF E L G L E V 0 0 0 2 0 0 1 1 0 0 3 1 0 0 0 0 1 0 0 0 0 0 9 1 0 0 1002.5233 P0ABH7 P0ABH7 330 338 gltA Citrate synthase yes yes 2 0.020999 55.531 By MS/MS 1 14205000 14205000 0 0 0 0 0 0 0 2695 200 2904 15818 11969 11969 1 218260000 0 0 0 0 0 0 0 LGVDVYAVSTDTHFTHK TELGDVADHYEELQKLGVDVYAVSTDTHFT VDVYAVSTDTHFTHKAWHSSSETIAKIKYA K L G H K A 1 0 0 2 0 0 0 1 2 0 1 1 0 1 0 1 3 0 1 3 0 0 17 0 0 1 1888.9319 P0AE08 P0AE08 64 80 ahpC Alkyl hydroperoxide reductase subunit C yes yes 3 0.00020525 55.851 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 50054000 10643000 12354000 0 0 11858000 15199000 0 0 2696 233 2905 15819;15820;15821;15822 11970;11971;11972;11973 11971 4 10643000 12646000 0 0 14305000 16837000 0 0 LGVLKQQPP QTFIYKCDAVLCTLPLGVLKQQPPAVQFVP VLCTLPLGVLKQQPPAVQFVPPLPEWKTSA P L G P P A 0 0 0 0 0 2 0 1 0 0 2 1 0 0 2 0 0 0 0 1 0 0 9 1 0 1 978.58622 LSD1-FL-His LSD1-FL-His 629 637 yes yes 2 1.635E-52 170.17 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 3885400000 448610000 409490000 0 0 1398300000 1629000000 0 0 2697 24 2906 15823;15824;15825;15826;15827;15828 11974;11975;11976;11977;11978;11979 11975 6 2696600000 2450800000 0 0 1990400000 2322200000 0 0 LGVLKQQPPA QTFIYKCDAVLCTLPLGVLKQQPPAVQFVP LCTLPLGVLKQQPPAVQFVPPLPEWKTSAV P L G P A V 1 0 0 0 0 2 0 1 0 0 2 1 0 0 2 0 0 0 0 1 0 0 10 1 0 2 1049.6233 LSD1-FL-His LSD1-FL-His 629 638 yes yes 2 0.0057925 58.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6890200 1074000 946130 0 0 1899700 2970500 0 0 2698 24 2907 15829;15830;15831;15832 11980;11981 11980 0 6482900 5662600 0 0 2704500 4234400 0 0 LGVNAGTR MPQPYIKLNPADAAKLGVNAGTRVSFSYDG NPADAAKLGVNAGTRVSFSYDGNTVTLPVE K L G T R V 1 1 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 0 8 0 0 1 786.4348 P33602 P33602 850 857 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 6.8184E-05 108.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 212590000 57764000 77425000 0 0 41915000 35482000 0 0 2699 345 2908 15833;15834;15835;15836 11982;11983;11984;11985 11984 1 57764000 79253000 0 0 50562000 39306000 0 0 LGVSTYLLDGDNVR GKSTVAGALEEALHKLGVSTYLLDGDNVRH KLGVSTYLLDGDNVRHGLCSDLGFSDADRK K L G V R H 0 1 1 2 0 0 0 2 0 0 3 0 0 0 0 1 1 0 1 2 0 0 14 0 0 0 1520.7835 P0A6J1 P0A6J1 55 68 cysC Adenylyl-sulfate kinase yes yes 2 5.4121E-23 159.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 165640000 47882000 45731000 0 0 28992000 43040000 0 0 2700 73 2909 15837;15838;15839;15840 11986;11987;11988;11989;11990;11991 11990 6 47882000 46810000 0 0 34974000 47679000 0 0 LGWSHGDQEIFTR DDGYLPEALLNYLVRLGWSHGDQEIFTREE VRLGWSHGDQEIFTREEMIKYFTLNAVSKS R L G T R E 0 1 0 1 0 1 1 2 1 1 1 0 0 1 0 1 1 1 0 0 0 0 13 0 1 0 1544.7372 P04805 P04805 267 279 gltX Glutamate--tRNA ligase yes yes 3 2.2576E-15 108.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32355000 0 12834000 0 0 9651600 9869500 0 0 2701 45 2910 15841;15842;15843;15844 11992;11993;11994;11995 11992 4 0 13137000 0 0 11643000 10933000 0 0 LGYLGSLAICNVPGSSLVRE GETADTLAGLRLSKELGYLGSLAICNVPGS SLAICNVPGSSLVRESDLALMTNAGTEIGV E L G R E S 1 1 1 0 1 0 1 3 0 1 4 0 0 0 1 3 0 0 1 2 0 0 20 1 0 2 2104.0987 P17169 P17169 366 385 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 4.6114E-64 193.06 By matching By MS/MS By MS/MS By MS/MS 1 2 2 3 289950000 22107000 16732000 0 0 26797000 224310000 0 0 2702 288 2911 15845;15846;15847;15848;15849;15850;15851;15852 11996;11997;11998 11997 3 22107000 47125000 0 0 177440000 3279100000 0 0 LGYPITDDLDIYTR ENGAYKAQGVQLTAKLGYPITDDLDIYTRL KLGYPITDDLDIYTRLGGMVWRADTKSNVY K L G T R L 0 1 0 3 0 0 0 1 0 2 2 0 0 0 1 0 2 0 2 0 0 0 14 0 0 1 1653.825 P0A910 P0A910 104 117 ompA Outer membrane protein A yes yes 2 8.2777E-11 93.258 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31329000 7906700 5826100 0 0 9072500 8523100 0 0 2703 158 2912 15853;15854;15855;15856 11999;12000;12001;12002 12002 4 7906700 5963600 0 0 10944000 9441700 0 0 LHDVSEEVHR WFNAAIAMNKPWSEKLHDVSEEVHRALQKL PWSEKLHDVSEEVHRALQKLQQIEEETGLT K L H H R A 0 1 0 1 0 0 2 0 2 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 2 0 1219.5945 P00579 P00579 330 339 rpoD RNA polymerase sigma factor RpoD yes yes 2;3 1.1606E-110 201.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1438300000 478650000 561570000 0 0 202010000 196080000 0 0 2704 27 2913 15857;15858;15859;15860;15861;15862;15863;15864;15865 12003;12004;12005;12006;12007;12008;12009 12004 7 478650000 582940000 0 0 243690000 217210000 0 0 LHDYYKDEVVK ______________________________ ______________________________ K L H V K K 0 0 0 2 0 0 1 0 1 0 1 2 0 0 0 0 0 0 2 2 0 0 11 1 1 0 1407.7034 P62399 P62399 4 14 rplE 50S ribosomal protein L5 yes yes 4 0.019726 17.809 By MS/MS By MS/MS By MS/MS 1 1 1 13579000 4465800 5370600 0 0 3742500 0 0 0 2705 388 2914 15866;15867;15868 12010;12011 12010 2 4465800 5497400 0 0 4514600 0 0 0 LHDYYKDEVVKK ______________________________ MAKLHDYYKDEVVKKLMTEFNYNSVMQVPR K L H K K L 0 0 0 2 0 0 1 0 1 0 1 3 0 0 0 0 0 0 2 2 0 0 12 2 1 0 1535.7984 P62399 P62399 4 15 rplE 50S ribosomal protein L5 yes yes 3;4 1.4111E-19 128.68 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 153880000 42003000 56366000 0 0 28023000 27485000 0 0 2706 388 2915 15869;15870;15871;15872;15873;15874;15875;15876 12012;12013;12014;12015;12016;12017;12018;12019;12020 12016 9 42003000 57696000 0 0 33805000 30447000 0 0 LHEEAMALPSEEEFAER RKGEETPTLSYMLPKLHEEAMALPSEEEFA EEAMALPSEEEFAERKRPEQPALATFAMPD K L H E R K 3 1 0 0 0 0 6 0 1 0 2 0 1 1 1 1 0 0 0 0 0 0 17 0 6 4 1986.8993 P21513 P21513 505 521 rne Ribonuclease E yes yes 3 3.9599E-18 104.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 48918000 14133000 13408000 0 0 9616300 11761000 0 0 2707 297 2916 15877;15878;15879;15880 12021;12022;12023;12024 12022 4 14133000 13725000 0 0 11600000 13028000 0 0 LHGHSFMVR AHRLPHVPEGHKCGRLHGHSFMVRLEITGE GHKCGRLHGHSFMVRLEITGEVDPHTGWII R L H V R L 0 1 0 0 0 0 0 1 2 0 1 0 1 1 0 1 0 0 0 1 0 0 9 0 0 0 1082.5444 P65870 P65870 30 38 queD 6-carboxy-5,6,7,8-tetrahydropterin synthase yes yes 3 0.00061188 64.654 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13033000 3173000 4404000 0 0 2273400 3182200 0 0 2708 399 2917 15881;15882;15883;15884 12025;12026;12027;12028 12026 4 3173000 4507900 0 0 2742400 3525200 0 0 LHGLSVQVETNHVK LENAIEFYGAISHNKLHGLSVQVETNHVKL KLHGLSVQVETNHVKLPAVVDGFASEGIIQ K L H V K L 0 0 1 0 0 1 1 1 2 0 2 1 0 0 0 1 1 0 0 3 0 0 14 0 1 0 1559.842 P00936 P00936 715 728 cyaA Adenylate cyclase yes yes 3 4.0056E-08 60.401 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 29979000 11538000 11369000 0 0 7072800 0 0 0 2709 31 2918 15885;15886;15887;15888 12029;12030;12031 12031 3 11538000 11637000 0 0 8532000 0 0 0 LHGTEWGETQR WGELEFVLPDEKVVRLHGTEWGETQRFYHH KVVRLHGTEWGETQRFYHHLDAHWRRWSGE R L H Q R F 0 1 0 0 0 1 2 2 1 0 1 0 0 0 0 0 2 1 0 0 0 0 11 0 2 0 1312.616 P15038 P15038 69 79 helD Helicase IV yes yes 2;3 7.4842E-06 108.98 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 3 93114000 21327000 29203000 0 0 21379000 21205000 0 0 2710 281 2919 15889;15890;15891;15892;15893;15894;15895;15896;15897;15898;15899 12032;12033;12034;12035;12036 12034 5 21327000 29892000 0 0 25790000 23491000 0 0 LHILGVMEQAINAPR KEIMQVALNQAKGARLHILGVMEQAINAPR LHILGVMEQAINAPRGDISEFAPRIHTIKI R L H P R G 2 1 1 0 0 1 1 1 1 2 2 0 1 0 1 0 0 0 0 1 0 0 15 0 1 3 1660.9083 P05055 P05055 531 545 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 9.3538E-15 112.43 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40074000 8259600 8589600 0 0 9237800 13987000 0 0 2711 48 2920 15900;15901;15902;15903 12037;12038;12039;12040 12039 4 8259600 8792300 0 0 11144000 15495000 0 0 LHKGKPFAPLLE TSPGRRHVVKVVNPELHKGKPFAPLLEKNS NPELHKGKPFAPLLEKNSKSGGRNNNGRIT E L H L E K 1 0 0 0 0 0 1 1 1 0 3 2 0 1 2 0 0 0 0 0 0 0 12 2 0 3 1348.7867 P60422 P60422 24 35 rplB 50S ribosomal protein L2 yes yes 2;3 9.2156E-08 77.677 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 1 2 2 309220000 17743000 14682000 44938000 45241000 17322000 12145000 64976000 92178000 2712 379 2921 15904;15905;15906;15907;15908;15909;15910;15911;15912;15913;15914;15915;15916 12041;12042;12043;12044;12045;12046 12046 6 272610000 223900000 381830000 342990000 266690000 184070000 500070000 528990000 LHMDIRPLPGMTLNE IHGGDASNRICACCELHMDIRPLPGMTLNE LHMDIRPLPGMTLNELNGLLNDALAPVSER E L H N E L 0 1 1 1 0 0 1 1 1 1 3 0 2 0 2 0 1 0 0 0 0 0 15 1 0 2 1735.8749 P23908 P23908 259 273 argE Acetylornithine deacetylase yes yes 3 1.4489E-14 89.231 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 3 2 2 3 250840000 8482700 9411200 2892000 30193000 66528000 66125000 30228000 36981000 2713 308 2922;2923;2924 15917;15918;15919;15920;15921;15922;15923;15924;15925;15926;15927;15928;15929;15930;15931;15932;15933;15934 12047;12048;12049;12050;12051;12052;12053;12054;12055;12056;12057;12058;12059 12050 256;257 13 130330000 143520000 24573000 228910000 1024300000 1002200000 232640000 212230000 LHPEDAESQPLTDDR GHFGEAAINDWFRQRLHPEDAESQPLTDDR LHPEDAESQPLTDDRCSVAALRLRDGEEPL R L H D R C 1 1 0 3 0 1 2 0 1 0 2 0 0 0 2 1 1 0 0 0 0 0 15 0 2 3 1721.7857 P15723 P15723 140 154 dgt Deoxyguanosinetriphosphate triphosphohydrolase yes yes 3 0.0030237 38.337 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 13213000 3862200 3840300 0 0 2078200 3431800 0 0 2714 283 2925 15935;15936;15937;15938 12060;12061;12062 12061 3 3862200 3930900 0 0 2507000 3801700 0 0 LHPLSSK ADRNTLIRRYSDTRRLHPLSSKNLSLESAI RRYSDTRRLHPLSSKNLSLESAIDKESDLL R L H S K N 0 0 0 0 0 0 0 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 7 0 0 1 780.44939 P0A894 P0A894 102 108 rapZ RNase adapter protein RapZ yes yes 2 0.0033253 76.035 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20960000 8320900 6713600 0 0 3419100 2506800 0 0 2715 141 2926 15939;15940;15941;15942 12063;12064 12064 0 8320900 6872000 0 0 4124400 2777000 0 0 LHPPIPGYECPPNHQLVE APVSERWPGRLTVDELHPPIPGYECPPNHQ PIPGYECPPNHQLVEVVEKLLGAKTEVVNY E L H V E V 0 0 1 0 1 1 2 1 2 1 2 0 0 0 5 0 0 0 1 1 0 0 18 0 1 5 2096.0149 P23908 P23908 298 315 argE Acetylornithine deacetylase yes yes 3 6.5591E-13 83.54 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 246430000 25112000 24242000 45168000 45400000 27431000 22069000 17497000 39507000 2716 308 2927 15943;15944;15945;15946;15947;15948;15949;15950;15951 12065;12066;12067;12068;12069;12070 12069 6 276080000 369690000 383780000 344200000 422320000 334490000 134660000 226720000 LHQQYKE ELLNKMVNLKEKIKELHQQYKEASEVKPPR NLKEKIKELHQQYKEASEVKPPRDITAEFL E L H K E A 0 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 7 1 0 0 944.47158 LSD1-FL-His LSD1-FL-His 460 466 yes yes 2;3 8.2866E-07 114.78 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 23274000000 0 0 2570300000 2989600000 574980 0 8044900000 9668400000 2717 24 2928 15952;15953;15954;15955;15956;15957;15958 12071;12072;12073;12074;12075 12073 4 0 0 21839000000 22666000000 8852300 0 61915000000 55485000000 LHQQYKEASE ELLNKMVNLKEKIKELHQQYKEASEVKPPR EKIKELHQQYKEASEVKPPRDITAEFLVKS E L H S E V 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 10 1 1 1 1231.5833 LSD1-FL-His LSD1-FL-His 460 469 yes yes 2;3 6.4443E-36 160.59 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 1 2 563240000 1827000 1113600 101430000 108330000 14794000 13890000 109530000 212330000 2718 24 2929 15959;15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970 12076;12077;12078;12079;12080;12081 12081 6 28071000 16982000 861830000 821290000 227770000 210530000 842960000 1218500000 LHRERIGGITLDADLAPGE QVKRMFAAVGNHVVELHRERIGGITLDADL RIGGITLDADLAPGEYRPLTEEEIASVV__ E L H G E Y 2 2 0 2 0 0 2 3 1 2 3 0 0 0 1 0 1 0 0 0 0 0 19 2 1 3 2032.0702 P0AA43 P0AA43 200 218 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3 0.0071178 24.3 By MS/MS By MS/MS 1 1 23008000 0 0 0 0 13424000 9583700 0 0 2719 183 2930 15971;15972 12082 12082 1 0 0 0 0 206680000 145260000 0 0 LHRERIGGITLDADLAPGEYRPLTE QVKRMFAAVGNHVVELHRERIGGITLDADL LDADLAPGEYRPLTEEEIASVV________ E L H T E E 2 3 0 2 0 0 3 3 1 2 4 0 0 0 2 0 2 0 1 0 0 0 25 3 2 4 2791.4617 P0AA43 P0AA43 200 224 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4 0.0014492 25.67 By MS/MS 1 1314500 0 0 0 0 1314500 0 0 0 2720 183 2931 15973 12083 12083 1 0 0 0 0 20239000 0 0 0 LHSFELAMDVK DEIMVNGQIFDHQARLHSFELAMDVKEELL HQARLHSFELAMDVKEELLG__________ R L H V K E 1 0 0 1 0 0 1 0 1 0 2 1 1 1 0 1 0 0 0 1 0 0 11 0 1 1 1288.6486 P0ADV5 P0ADV5 320 330 yhbW Uncharacterized protein YhbW yes yes 2;3 3.0242E-64 202.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 92295000 16638000 19261000 0 0 28805000 27591000 0 0 2721 226 2932;2933 15974;15975;15976;15977;15978;15979;15980;15981;15982;15983 12084;12085;12086;12087;12088;12089;12090;12091;12092;12093 12093 204 10 16638000 19715000 0 0 34748000 30564000 0 0 LHTEDITAR GRKAAEEMDERIRERLHTEDITARTFHALA ERIRERLHTEDITARTFHALALHIIQQGSK R L H A R T 1 1 0 1 0 0 1 0 1 1 1 0 0 0 0 0 2 0 0 0 0 0 9 0 1 1 1054.5407 P15038 P15038 265 273 helD Helicase IV yes yes 2;3 6.3738E-61 150.05 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 169650000 41611000 55249000 0 0 34865000 37924000 0 0 2722 281 2934 15984;15985;15986;15987;15988;15989;15990;15991 12094;12095;12096;12097;12098;12099;12100;12101 12099 8 41611000 56553000 0 0 42058000 42011000 0 0 LHTVLER AWQVNESTENIGARRLHTVLERLMEEISYD TENIGARRLHTVLERLMEEISYDASDLSGQ R L H E R L 0 1 0 0 0 0 1 0 1 0 2 0 0 0 0 0 1 0 0 1 0 0 7 0 1 0 866.4974 P0A6H5 P0A6H5 395 401 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0016497 100.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19111000 4572200 4009200 0 0 5599900 4929300 0 0 2723 71 2935 15992;15993;15994;15995 12102;12103;12104;12105 12103 4 4572200 4103800 0 0 6755100 5460500 0 0 LIAEAMDKVGK QVGTISANSDETVGKLIAEAMDKVGKEGVI TVGKLIAEAMDKVGKEGVITVEDGTGLQDE K L I G K E 2 0 0 1 0 0 1 1 0 1 1 2 1 0 0 0 0 0 0 1 0 0 11 1 1 2 1173.6427 P0A6F5 P0A6F5 161 171 groL 60 kDa chaperonin yes yes 2;3 0.00010085 99.013 By MS/MS By MS/MS By MS/MS 2 2 2 57613000 20401000 33421000 0 0 0 3790700 0 0 2724 68 2936 15996;15997;15998;15999;16000;16001 12106;12107;12108;12109 12109 4 20401000 34210000 0 0 0 4415800 0 0 LIAKKFAVLKE IGHSERRTYHKESDELIAKKFAVLKEQGLT ESDELIAKKFAVLKEQGLTPVLCIGETEAE E L I K E Q 2 0 0 0 0 0 1 0 0 1 2 3 0 1 0 0 0 0 0 1 0 0 11 3 0 2 1258.8013 P0A858 P0A858 108 118 tpiA Triosephosphate isomerase yes yes 3 6.5728E-06 80.979 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 332980000 26100000 18660000 14590000 14234000 16918000 20196000 103420000 118860000 2725 139 2937 16002;16003;16004;16005;16006;16007;16008;16009 12110;12111;12112;12113 12113 4 401030000 284560000 123970000 107910000 260480000 306100000 795970000 682090000 LIATLDDSAKSAE TQLKAYLEKLTKPVELIATLDDSAKSAEIK VELIATLDDSAKSAEIKELLAEIAELSDKV E L I A E I 3 0 0 2 0 0 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 0 3 1332.6773 P35340 P35340 23 35 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.3891E-25 140.07 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 859920000 64287000 69317000 149770000 171610000 29155000 39854000 180340000 155580000 2726 348 2938 16010;16011;16012;16013;16014;16015;16016;16017;16018;16019;16020;16021 12114;12115;12116;12117;12118;12119;12120;12121;12122 12114 8 946490000 1033200000 1272600000 1301100000 392100000 539950000 1388000000 892840000 LIATLDDSAKSAEIKE TQLKAYLEKLTKPVELIATLDDSAKSAEIK IATLDDSAKSAEIKELLAEIAELSDKVTFK E L I K E L 3 0 0 2 0 0 2 0 0 2 2 2 0 0 0 2 1 0 0 0 0 0 16 2 1 3 1702.8989 P35340 P35340 23 38 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 9.7849E-11 90.614 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 2 247930000 6787400 7314000 7166200 81879000 5189600 3923500 66689000 68979000 2727 348 2939 16022;16023;16024;16025;16026;16027;16028;16029;16030;16031;16032 12123;12124;12125;12126;12127;12128;12129;12130 12123 8 104290000 111540000 60890000 620770000 79898000 59467000 513250000 395860000 LICGIERPSAGK FLTGHSGAGKSTLLKLICGIERPSAGKIWF LLKLICGIERPSAGKIWFSGHDITRLKNRE K L I G K I 1 1 0 0 1 0 1 2 0 2 1 1 0 0 1 1 0 0 0 0 0 0 12 1 1 2 1299.6969 P0A9R7 P0A9R7 47 58 ftsE Cell division ATP-binding protein FtsE yes yes 3 0.022979 26.112 By matching By MS/MS By MS/MS 1 1 1 15017000 4577700 0 0 0 5401700 5037500 0 0 2728 174 2940 16033;16034;16035 12131 12131 1 4577700 0 0 0 6516100 5580400 0 0 LIDALPDHAR VVDEASMIDLPMMSRLIDALPDHARVIFLG PMMSRLIDALPDHARVIFLGDRDQLASVEA R L I A R V 2 1 0 2 0 0 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 10 0 0 3 1119.6037 P04993 P04993 282 291 recD RecBCD enzyme subunit RecD yes yes 3 0.0002035 76.228 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 66770000 17711000 16942000 0 0 15870000 16247000 0 0 2729 46 2941 16036;16037;16038;16039 12132;12133;12134;12135 12133 4 17711000 17342000 0 0 19144000 17998000 0 0 LIDATFADR GNGYTNEPVLRLAKKLIDATFADRVFFCNS LRLAKKLIDATFADRVFFCNSGAEANEAAL K L I D R V 2 1 0 2 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 9 0 0 2 1020.524 P77581 P77581 90 98 astC Succinylornithine transaminase yes yes 2 0.00024514 99.305 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 188260000 57519000 37274000 0 0 41296000 52167000 0 0 2730 437 2942 16040;16041;16042;16043 12136;12137;12138 12138 2 57519000 38154000 0 0 49815000 57789000 0 0 LIDEALLDQYAR NEGYMKTLRQQVLNRLIDEALLDQYARELK LNRLIDEALLDQYARELKLGISDEQVKQAI R L I A R E 2 1 0 2 0 1 1 0 0 1 3 0 0 0 0 0 0 0 1 0 0 0 12 0 1 2 1418.7405 P0ADY1 P0ADY1 95 106 ppiD Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.00021913 60.518 By MS/MS By MS/MS By matching 1 1 1 8008300 4020300 3237800 0 0 0 0 750210 0 2731 227 2943 16044;16045;16046 12139;12140 12140 1 4020300 3314300 0 0 0 0 5773800 0 LIDMGEEIGLATVYR EPDNHHVSAEDLYKRLIDMGEEIGLATVYR LIDMGEEIGLATVYRVLNQFDDAGIVTRHN R L I Y R V 1 1 0 1 0 0 2 2 0 2 2 0 1 0 0 0 1 0 1 1 0 0 15 0 2 1 1678.86 P0A9A9 P0A9A9 43 57 fur Ferric uptake regulation protein yes yes 2 7.384E-191 228.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 385390000 82073000 71615000 0 0 110640000 121060000 0 0 2732 162 2944;2945 16047;16048;16049;16050;16051;16052;16053;16054 12141;12142;12143;12144;12145;12146;12147;12148 12147 154 8 82073000 73306000 0 0 133470000 134110000 0 0 LIDQATAEIVETAK QNQRIRIRLKAFDHRLIDQATAEIVETAKR RLIDQATAEIVETAKRTGAQVRGPIPLPTR R L I A K R 3 0 0 1 0 1 2 0 0 2 1 1 0 0 0 0 2 0 0 1 0 0 14 0 2 3 1500.8035 P0A7R5 P0A7R5 17 30 rpsJ 30S ribosomal protein S10 yes yes 2 1.3706E-51 196.24 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 424700000 96411000 148790000 0 0 79139000 100360000 0 0 2733 120 2946 16055;16056;16057;16058 12149;12150;12151;12152 12152 4 96411000 152300000 0 0 95466000 111180000 0 0 LIDQATAEIVETAKR QNQRIRIRLKAFDHRLIDQATAEIVETAKR LIDQATAEIVETAKRTGAQVRGPIPLPTRK R L I K R T 3 1 0 1 0 1 2 0 0 2 1 1 0 0 0 0 2 0 0 1 0 0 15 1 2 3 1656.9046 P0A7R5 P0A7R5 17 31 rpsJ 30S ribosomal protein S10 yes yes 2;3 7.2175E-07 76.655 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 136460000 67667000 40116000 0 0 12858000 15824000 0 0 2734 120 2947 16059;16060;16061;16062;16063;16064 12153;12154;12155;12156 12153 2 67667000 41063000 0 0 15510000 17529000 0 0 LIEVLPGYR QIPRIAVREALRAGRLIEVLPGYRAEPLSL ALRAGRLIEVLPGYRAEPLSLSLVYPQRRE R L I Y R A 0 1 0 0 0 0 1 1 0 1 2 0 0 0 1 0 0 0 1 1 0 0 9 0 1 1 1058.6124 P37641 P37641 255 263 yhjC Uncharacterized HTH-type transcriptional regulator YhjC yes yes 2 0.0021007 75.854 By MS/MS By MS/MS By MS/MS 1 1 1 8980900 0 3701800 0 0 2041400 3237700 0 0 2735 359 2948 16065;16066;16067 12157;12158;12159 12158 3 0 3789100 0 0 2462600 3586600 0 0 LIEVPVEYIAGK ITARHIRQLEKDDVKLIEVPVEYIAGKVVA DVKLIEVPVEYIAGKVVAKDYIDESTGELI K L I G K V 1 0 0 0 0 0 2 1 0 2 1 1 0 0 1 0 0 0 1 2 0 0 12 0 2 2 1329.7544 P0A8V2 P0A8V2 284 295 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 1.4095E-07 103.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41298000 9506800 11917000 0 0 6978800 12895000 0 0 2736 154 2949 16068;16069;16070;16071 12160;12161;12162;12163 12160 4 9506800 12198000 0 0 8418600 14285000 0 0 LIFDKESHR SGRAIASDCADGMTKLIFDKESHRVIGGAI ADGMTKLIFDKESHRVIGGAIVGTNGGELL K L I H R V 0 1 0 1 0 0 1 0 1 1 1 1 0 1 0 1 0 0 0 0 0 0 9 1 1 0 1143.6037 P0A9P0 P0A9P0 399 407 lpdA Dihydrolipoyl dehydrogenase yes yes 3 0.0011142 65.224 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 79303000 22519000 36125000 0 0 9479000 11181000 0 0 2737 172 2950 16072;16073;16074;16075 12164;12165;12166;12167 12166 4 22519000 36978000 0 0 11435000 12386000 0 0 LIHEHCER PKLDDKNRPTFAYGRLIHEHCERRPHFDAG PTFAYGRLIHEHCERRPHFDAGRFAKEFGD R L I E R R 0 1 0 0 1 0 2 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 8 0 2 0 1092.5135 P69741 P69741 227 234 hybO Hydrogenase-2 small chain yes yes 3 0.0091644 47.198 By MS/MS By MS/MS 1 1 12696000 9568400 3128000 0 0 0 0 0 0 2738 403 2951 16076;16077 12168 12168 1 9568400 3201800 0 0 0 0 0 0 LIIRLGIDIE RERRLYQQMAQYRPELIIRLGIDIETAISR QYRPELIIRLGIDIETAISRKPDHDYAELQ E L I I E T 0 1 0 1 0 0 1 1 0 4 2 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 1153.7071 P64572 P64572 179 188 yghR Uncharacterized ATP-binding protein YghR yes yes 2 7.8221E-05 79.906 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 21760000 2034600 1609300 0 2201800 5700100 8286000 912260 1015500 2739 395 2952 16078;16079;16080;16081;16082;16083;16084 12169;12170 12170 2 31262000 24541000 0 16693000 87758000 125590000 7021000 5827700 LIKEVNKAA HWVGQGATISDRVAALIKEVNKAA______ SDRVAALIKEVNKAA_______________ A L I A A - 2 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 9 2 1 1 984.59678 P0A7T3 P0A7T3 74 82 rpsP 30S ribosomal protein S16 yes yes 2 0.014496 44.447 By MS/MS By MS/MS By MS/MS 1 1 1 14806000 3852900 2548600 0 0 0 8405000 0 0 2740 124 2953 16085;16086;16087 12171;12172 12171 2 23258000 15253000 0 0 0 11981000 0 0 LIKGTDVDQP IFYTVPLQLLAYHVALIKGTDVDQPRNLAK AYHVALIKGTDVDQPRNLAKSVTVE_____ A L I Q P R 0 0 0 2 0 1 0 1 0 1 1 1 0 0 1 0 1 0 0 1 0 0 10 1 0 0 1084.5764 P17169 P17169 590 599 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.0046378 81.191 By MS/MS By MS/MS 1 1 1266900000 0 0 0 0 772510000 494420000 0 0 2741 288 2954 16088;16089 12173 12173 1 0 0 0 0 1099800000 704790000 0 0 LIKGTDVDQPRNLA IFYTVPLQLLAYHVALIKGTDVDQPRNLAK ALIKGTDVDQPRNLAKSVTVE_________ A L I L A K 1 1 1 2 0 1 0 1 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 2 0 1 1538.8417 P17169 P17169 590 603 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 0.00017151 50.222 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25392000 3762500 4271500 0 0 6878600 10479000 0 0 2742 288 2955 16090;16091;16092;16093 12174;12175;12176 12175 1 22712000 25565000 0 0 9793000 14938000 0 0 LIKQRIAQFNVVSE ______________________________ ELIKQRIAQFNVVSEAHNEGTIVSVSDGVI E L I S E A 1 1 1 0 0 2 1 0 0 2 1 1 0 1 0 1 0 0 0 2 0 0 14 2 0 1 1643.9359 P0ABB0 P0ABB0 11 24 atpA ATP synthase subunit alpha yes yes 3 0.015896 29.328 By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 28252000 0 0 2304800 3613700 0 4876400 7936300 9520800 2743 193 2956 16094;16095;16096;16097;16098 12177 12177 1 0 0 19584000 27397000 0 73909000 61080000 54638000 LILLVLDAAR DIGEALEARFVLEDKLILLVLDAARVKHPA VLEDKLILLVLDAARVKHPA__________ K L I A R V 2 1 0 1 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 1 0 0 10 0 0 2 1095.7016 P0AFX4 P0AFX4 144 153 rsd Regulator of sigma D yes yes 2 7.6238E-05 99.802 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 225820000 44674000 36378000 0 0 64636000 80132000 0 0 2744 251 2957 16099;16100;16101;16102 12178;12179;12180;12181 12179 4 44674000 37237000 0 0 77970000 88768000 0 0 LILSNQYK ______________________________ EMTNAQRLILSNQYKMMTMLDPANAERYRR R L I Y K M 0 0 1 0 0 1 0 0 0 1 2 1 0 0 0 1 0 0 1 0 0 0 8 0 0 0 977.55458 P0A8W8 P0A8W8 9 16 yfbU UPF0304 protein YfbU yes yes 2 0.0018941 89.369 By MS/MS By MS/MS By MS/MS 1 1 1 23953000 6726900 11185000 0 0 6040900 0 0 0 2745 155 2958 16103;16104;16105 12182;12183;12184 12182 3 6726900 11449000 0 0 7287100 0 0 0 LILTPTRELA ITRQPHAKGRRPVRALILTPTRELAAQIGE RPVRALILTPTRELAAQIGENVRDYSKYLN A L I L A A 1 1 0 0 0 0 1 0 0 1 3 0 0 0 1 0 2 0 0 0 0 0 10 1 1 1 1125.6758 P25888 P25888 79 88 rhlE ATP-dependent RNA helicase RhlE yes yes 2 1.4516E-05 103.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46652000 4175800 3171300 0 0 20169000 19136000 0 0 2746 318 2959 16106;16107;16108;16109 12185;12186 12186 1 25207000 18980000 0 0 28714000 27278000 0 0 LILTPTRELAA ITRQPHAKGRRPVRALILTPTRELAAQIGE PVRALILTPTRELAAQIGENVRDYSKYLNI A L I A A Q 2 1 0 0 0 0 1 0 0 1 3 0 0 0 1 0 2 0 0 0 0 0 11 1 1 2 1196.7129 P25888 P25888 79 89 rhlE ATP-dependent RNA helicase RhlE yes yes 2 3.3339E-06 85.676 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 163730000 6906700 8493300 0 0 99506000 48823000 0 0 2747 318 2960 16110;16111;16112;16113 12187;12188;12189;12190 12187 2 41693000 50832000 0 0 141660000 69597000 0 0 LINAEGK RSYRTMEGFGIHTFRLINAEGKATFVRFHW GFGIHTFRLINAEGKATFVRFHWKPLAGKA R L I G K A 1 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 1 1 743.41775 P21179 P21179 279 285 katE Catalase HPII yes yes 2 6.7258E-07 90.706 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 119650000 46860000 33945000 0 0 21487000 17363000 0 0 2748 293 2961 16114;16115;16116;16117 12191;12192;12193;12194 12193 3 46860000 34746000 0 0 25920000 19234000 0 0 LINHAIR EIQYCYVNGRMMRDRLINHAIRQACEDKLG NGRMMRDRLINHAIRQACEDKLGADQQPAF R L I I R Q 1 1 1 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 835.50282 P23367 P23367 267 273 mutL DNA mismatch repair protein MutL yes yes 2 0.0037168 66.994 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17335000 0 17145000 0 0 0 189610 0 0 2749 302 2962 16118;16119;16120;16121 12195;12196;12197 12197 3 0 17550000 0 0 0 270280 0 0 LINYLVEEFK TNGDTHLGGEDFDSRLINYLVEEFKKDQGI DFDSRLINYLVEEFKKDQGIDLRNDPLAMQ R L I F K K 0 0 1 0 0 0 2 0 0 1 2 1 0 1 0 0 0 0 1 1 0 0 10 0 2 0 1266.686 P0A6Y8 P0A6Y8 236 245 dnaK Chaperone protein DnaK yes yes 2 3.1585E-15 133.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 98527000 21980000 24637000 0 0 19533000 32377000 0 0 2750 86 2963 16122;16123;16124;16125 12198;12199;12200;12201 12200 4 21980000 25218000 0 0 23563000 35867000 0 0 LINYLVEEFKK TNGDTHLGGEDFDSRLINYLVEEFKKDQGI FDSRLINYLVEEFKKDQGIDLRNDPLAMQR R L I K K D 0 0 1 0 0 0 2 0 0 1 2 2 0 1 0 0 0 0 1 1 0 0 11 1 2 0 1394.781 P0A6Y8 P0A6Y8 236 246 dnaK Chaperone protein DnaK yes yes 2;3 6.4224E-94 166.07 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2364500000 827700000 458430000 0 0 520900000 557430000 0 0 2751 86 2964 16126;16127;16128;16129;16130;16131;16132;16133;16134 12202;12203;12204;12205;12206;12207;12208;12209 12207 4 831720000 469250000 0 0 628370000 617510000 0 0 LINYLVEEFKKDQGIDLR TNGDTHLGGEDFDSRLINYLVEEFKKDQGI YLVEEFKKDQGIDLRNDPLAMQRLKEAAEK R L I L R N 0 1 1 2 0 1 2 1 0 2 3 2 0 1 0 0 0 0 1 1 0 0 18 2 2 0 2192.1841 P0A6Y8 P0A6Y8 236 253 dnaK Chaperone protein DnaK yes yes 4 0.00061652 41.412 By MS/MS By MS/MS By matching 1 1 1 10985000 4170600 4846700 0 0 0 1967800 0 0 2752 86 2965 16135;16136;16137 12210;12211 12210 2 4170600 4961100 0 0 0 2179900 0 0 LIPAAVEGGLHQIETASGAVLK DEYDVDVIDSQSASKLIPAAVEGGLHQIET GGLHQIETASGAVLKARSIIVATGAKWRNM K L I L K A 4 0 0 0 0 1 2 3 1 2 3 1 0 0 1 1 1 0 0 2 0 0 22 0 2 5 2173.2107 P35340 P35340 293 314 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 1.2556E-115 218.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2747700000 336160000 627510000 0 0 771270000 1012800000 0 0 2753 348 2966 16138;16139;16140;16141;16142;16143;16144;16145 12212;12213;12214;12215;12216;12217;12218;12219 12213 8 336160000 642320000 0 0 930380000 1121900000 0 0 LIPAGTGYAYHQDR RDELRGLKENVIVGRLIPAGTGYAYHQDRM RLIPAGTGYAYHQDRMRRRAAGEAPAAPQV R L I D R M 2 1 0 1 0 1 0 2 1 1 1 0 0 0 1 0 1 0 2 0 0 0 14 0 0 3 1560.7685 P0A8T7 P0A8T7 1356 1369 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 5.4467E-10 83.729 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30845000 8757600 7725100 0 0 7196000 7166100 0 0 2754 153 2967 16146;16147;16148;16149 12220;12221;12222;12223 12221 4 8757600 7907500 0 0 8680500 7938500 0 0 LIPALCAR FAAWSGTGKTTLLKKLIPALCARGIRPGLI KTTLLKKLIPALCARGIRPGLIKHTHHDMD K L I A R G 2 1 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 8 0 0 3 912.52151 P32125 P32125 27 34 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 2 0.010501 52.683 By MS/MS 1 4366000 0 0 0 0 0 4366000 0 0 2755 337 2968 16150 12224 12224 1 0 0 0 0 0 4836600 0 0 LIPASQIDRLATLPTYEE ANAKFEVKAAAFEGELIPASQIDRLATLPT ASQIDRLATLPTYEEAIARLMATMKEASAG E L I E E A 2 1 0 1 0 1 2 0 0 2 3 0 0 0 2 1 2 0 1 0 0 0 18 1 1 4 2029.0732 P0A7J3 P0A7J3 117 134 rplJ 50S ribosomal protein L10 yes yes 2 0.0022614 51.841 By MS/MS 1 1100500 0 0 0 0 0 0 0 1100500 2756 106 2969 16151 12225 12225 1 0 0 0 0 0 0 0 6315700 LIPEELVPVQR EDEFKFDFDLLDPTKLIPEELVPVQRVGKM DPTKLIPEELVPVQRVGKMVLNRNPDNFFA K L I Q R V 0 1 0 0 0 1 2 0 0 1 2 0 0 0 2 0 0 0 0 2 0 0 11 0 2 2 1291.75 P21179 P21179 359 369 katE Catalase HPII yes yes 2 0.00073638 69.812 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 319460000 98385000 60516000 0 0 80077000 80484000 0 0 2757 293 2970 16152;16153;16154;16155 12226;12227;12228;12229 12229 4 98385000 61944000 0 0 96598000 89158000 0 0 LIPLTTAEQVGK ______________________________ ______________________________ R L I G K W 1 0 0 0 0 1 1 1 0 1 2 1 0 0 1 0 2 0 0 1 0 0 12 0 1 2 1268.734 P0A759 P0A759 3 14 nagB Glucosamine-6-phosphate deaminase yes yes 2 5.763E-07 119.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 104130000 20448000 20902000 0 0 24338000 38440000 0 0 2758 96 2971 16156;16157;16158;16159 12230;12231;12232;12233;12234;12235 12234 6 20448000 21395000 0 0 29359000 42582000 0 0 LISYSTR HEKVLQLQFIDPDVRLISYSTRHPKHDMQH QFIDPDVRLISYSTRHPKHDMQHLLKEVDK R L I T R H 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 1 0 1 0 0 0 7 0 0 0 838.45487 P0A8E1 P0A8E1 31 37 ycfP UPF0227 protein YcfP yes yes 2 6.5179E-17 135.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 976610000 241150000 295260000 3976900 5490300 214020000 216700000 0 0 2759 143 2972 16160;16161;16162;16163;16164;16165 12236;12237;12238;12239 12239 4 241150000 302230000 33791000 41625000 258180000 240060000 0 0 LITIAVPR KVTLRGERMWEFFERLITIAVPRIRDFRGL MWEFFERLITIAVPRIRDFRGLSAKSFDGR R L I P R I 1 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 0 1 0 0 8 0 0 2 881.56984 P62399 P62399 103 110 rplE 50S ribosomal protein L5 yes yes 2 5.7499E-08 124.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 130150000 41914000 28468000 0 0 28011000 31753000 0 0 2760 388 2973 16166;16167;16168;16169 12240;12241;12242;12243 12241 4 41914000 29140000 0 0 33790000 35175000 0 0 LIYQGVAHTTGGADQR LGCPVQVISGEEEARLIYQGVAHTTGGADQ IYQGVAHTTGGADQRLVVDIGGASTELVTG R L I Q R L 2 1 0 1 0 2 0 3 1 1 1 0 0 0 0 0 2 0 1 1 0 0 16 0 0 2 1685.8485 P25552 P25552 119 134 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2;3 2.5485E-134 202.32 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 514040000 151510000 135470000 0 0 109490000 117570000 0 0 2761 316 2974 16170;16171;16172;16173;16174;16175;16176;16177 12244;12245;12246;12247;12248;12249;12250;12251 12249 8 151510000 138670000 0 0 132080000 130240000 0 0 LKALSVPCSDSKAIAQVGTISANSDE LKRGIDKAVTAAVEELKALSVPCSDSKAIA KAIAQVGTISANSDETVGKLIAEAMDKVGK E L K D E T 4 0 1 2 1 1 1 1 0 2 2 2 0 0 1 5 1 0 0 2 0 0 26 2 0 5 2660.3327 P0A6F5 P0A6F5 131 156 groL 60 kDa chaperonin yes yes 3 1.6882E-87 152.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 878130000 49751000 60074000 36510000 50665000 222640000 201810000 103370000 153310000 2762 68 2975 16178;16179;16180;16181;16182;16183;16184;16185 12252;12253;12254;12255;12256;12257;12258 12256 7 764420000 916140000 310220000 384120000 3427700000 3058700000 795580000 879840000 LKALSVPCSDSKAIAQVGTISANSDETVGKLIAE LKRGIDKAVTAAVEELKALSVPCSDSKAIA ISANSDETVGKLIAEAMDKVGKEGVITVED E L K A E A 5 0 1 2 1 1 2 2 0 3 3 3 0 0 1 5 2 0 0 3 0 0 34 3 1 6 3471.8131 P0A6F5 P0A6F5 131 164 groL 60 kDa chaperonin yes yes 3;4 7.7377E-53 113.41 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 838880000 8334900 8503300 0 0 491920000 330120000 0 0 2763 68 2976 16186;16187;16188;16189;16190;16191 12259;12260;12261;12262;12263 12262 5 128060000 129680000 0 0 7573600000 5003500000 0 0 LKAPEPQEPALAANSQSFGR EVYRQLLQTPAPMQKLKAPEPQEPALAANS PQEPALAANSQSFGRVLTIVHSDCALLERD K L K G R V 4 1 1 0 0 2 2 1 0 0 2 1 0 1 3 2 0 0 0 0 0 0 20 1 2 7 2110.0807 P23367 P23367 418 437 mutL DNA mismatch repair protein MutL yes yes 3 9.0188E-32 122.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 91560000 21954000 20032000 0 0 17027000 32547000 0 0 2764 302 2977 16192;16193;16194;16195 12264;12265;12266;12267 12265 4 21954000 20504000 0 0 20540000 36055000 0 0 LKARGYTFVSE VHNGIIENHEPLREELKARGYTFVSETDTE LREELKARGYTFVSETDTEVIAHLVNWELK E L K S E T 1 1 0 0 0 0 1 1 0 0 1 1 0 1 0 1 1 0 1 1 0 0 11 2 0 1 1269.6717 P17169 P17169 112 122 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 2.2506E-06 93.649 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 1 553130000 33525000 33085000 74605000 74237000 19781000 14763000 131150000 171990000 2765 288 2978 16196;16197;16198;16199;16200;16201;16202;16203;16204;16205 12268;12269;12270;12271;12272 12271 5 437490000 442890000 633910000 562840000 304550000 223750000 1009300000 987030000 LKDLETQSQDGTFDK GMLTNWKTVRQSIKRLKDLETQSQDGTFDK LKDLETQSQDGTFDKLTKKEALMRTRELEK R L K D K L 0 0 0 3 0 2 1 1 0 0 2 2 0 1 0 1 2 0 0 0 0 0 15 1 1 0 1723.8265 P0A7V0 P0A7V0 114 128 rpsB 30S ribosomal protein S2 yes yes 2;3 6.438E-52 162.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 451390000 145860000 108240000 0 0 91186000 106100000 0 0 2766 128 2979 16206;16207;16208;16209;16210;16211;16212;16213 12273;12274;12275;12276;12277;12278;12279;12280;12281 12274 9 145860000 110790000 0 0 110000000 117530000 0 0 LKDLETQSQDGTFDKLTK GMLTNWKTVRQSIKRLKDLETQSQDGTFDK LETQSQDGTFDKLTKKEALMRTRELEKLEN R L K T K K 0 0 0 3 0 2 1 1 0 0 3 3 0 1 0 1 3 0 0 0 0 0 18 2 1 0 2066.0532 P0A7V0 P0A7V0 114 131 rpsB 30S ribosomal protein S2 yes yes 3;4 2.0073E-124 197.09 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 204390000 73715000 52224000 0 0 33863000 44587000 0 0 2767 128 2980 16214;16215;16216;16217;16218;16219;16220 12282;12283;12284;12285;12286;12287;12288 12284 7 73715000 53456000 0 0 40849000 49393000 0 0 LKDSVPCAVIEGDQQTVNDAAR PGSGKTTLLTETLMRLKDSVPCAVIEGDQQ AVIEGDQQTVNDAARIRATGTPAIQVNTGK R L K A R I 3 1 1 3 1 2 1 1 0 1 1 1 0 0 1 1 1 0 0 3 0 0 22 1 1 4 2385.1594 P0AAN3 P0AAN3 128 149 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 4.0458E-36 110.4 By MS/MS By MS/MS By MS/MS 1 1 1 39498000 21010000 0 0 0 8567200 9920900 0 0 2768 187 2981 16221;16222;16223 12289;12290;12291 12289 2 21010000 0 0 0 10335000 10990000 0 0 LKDVDTSMKLLSQLGAK ALLAEEPVEIQNVPKLKDVDTSMKLLSQLG DVDTSMKLLSQLGAKVERNGSVHIDARDVN K L K A K V 1 0 0 2 0 1 0 1 0 0 4 3 1 0 0 2 1 0 0 1 0 0 17 2 0 1 1846.0234 P0A749 P0A749 47 63 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase yes yes 2 0.0012888 38.021 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2769 95 2982 16224;16225 12292 12292 107 13;14;45 0 0 0 0 0 0 0 0 0 LKEHGLTR DSTLIRIFALHELHRLKEHGLTRGALLDYH ALHELHRLKEHGLTRGALLDYHSRYKLVFL R L K T R G 0 1 0 0 0 0 1 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 1 1 0 952.54541 P24252 P24252 23 30 ybgA Uncharacterized protein YbgA yes yes 2 0.0074079 74.127 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34484000 13803000 10351000 0 0 5934000 4395800 0 0 2770 313 2983 16226;16227;16228;16229 12293 12293 1 13803000 10596000 0 0 7158200 4869500 0 0 LKEISYIHAEAYAAGELK GRGDQYPIALEGALKLKEISYIHAEAYAAG ISYIHAEAYAAGELKHGPLALIDADMPVIV K L K L K H 4 0 0 0 0 0 3 1 1 2 2 2 0 0 0 1 0 0 2 0 0 0 18 1 3 4 2005.052 P17169 P17169 487 504 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 3.8264E-64 161.22 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 5 3 366190000 64265000 66778000 0 0 98735000 136410000 0 0 2771 288 2984 16230;16231;16232;16233;16234;16235;16236;16237;16238;16239;16240;16241;16242 12294;12295;12296;12297;12298;12299;12300;12301;12302 12302 9 79194000 68354000 0 0 166610000 152010000 0 0 LKEKNNSLSQE QAIDTITLLQMEIEELKEKNNSLSQEVQNA EIEELKEKNNSLSQEVQNAQHQREELEREN E L K Q E V 0 0 2 0 0 1 2 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 11 2 1 0 1288.6623 P0AF36 P0AF36 32 42 zapB Cell division protein ZapB yes yes 2 0.00097076 66.27 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 41546000 0 0 6993700 10632000 0 1368400 7212200 15340000 2772 242 2985 16243;16244;16245;16246;16247 12303 12303 1 0 0 59425000 80605000 0 20741000 55506000 88035000 LKELLNKMVNLKE EQIEHWKKIVKTQEELKELLNKMVNLKEKI EELKELLNKMVNLKEKIKELHQQYKEASEV E L K K E K 0 0 2 0 0 0 2 0 0 0 4 3 1 0 0 0 0 0 0 1 0 0 13 3 1 0 1570.9116 LSD1-FL-His LSD1-FL-His 443 455 yes yes 4 0.017915 20.427 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 30218000 0 283330 0 18115000 0 488930 11331000 0 2773 24 2986 16248;16249;16250;16251 12304 12304 0 0 4320800 0 137340000 0 7410500 87204000 0 LKEYQYQEVK GWTIFRELEVFVRSKLKEYQYQEVKGPFMM FVRSKLKEYQYQEVKGPFMMDRVLWEKTGH K L K V K G 0 0 0 0 0 2 2 0 0 0 1 2 0 0 0 0 0 0 2 1 0 0 10 1 2 0 1326.682 P0A8M3 P0A8M3 285 294 thrS Threonine--tRNA ligase yes yes 2;3 2.5683E-05 121.73 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 85285000 19686000 25331000 0 0 18795000 21473000 0 0 2774 147 2987 16252;16253;16254;16255;16256;16257;16258;16259 12305;12306;12307;12308;12309;12310;12311 12309 7 19686000 25929000 0 0 22673000 23787000 0 0 LKGDLNYLR LGYFTLALYTSAPSKLKGDLNYLRLEWGPD TSAPSKLKGDLNYLRLEWGPDFQQHEAGLI K L K L R L 0 1 1 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 1 0 0 0 9 1 0 0 1090.6135 P0A8R9 P0A8R9 176 184 hdfR HTH-type transcriptional regulator HdfR yes yes 2;3 8.8292E-19 135.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 177120000 58333000 43224000 0 0 34612000 40952000 0 0 2775 152 2988 16260;16261;16262;16263;16264;16265;16266;16267 12312;12313;12314;12315;12316;12317;12318 12312 7 58333000 44244000 0 0 41752000 45365000 0 0 LKGLDASIEHDIVHGLQALPSR TQLTVLLMLVAKLSRLKGLDASIEHDIVHG IEHDIVHGLQALPSRIEQMLSQDKRIEALA R L K S R I 2 1 0 2 0 1 1 2 2 2 4 1 0 0 1 2 0 0 0 1 0 0 22 1 1 3 2368.2863 P17169 P17169 423 444 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3;4;5 5.0796E-248 233.28 By MS/MS By MS/MS By MS/MS By MS/MS 5 4 4 5 3576300000 1189700000 691870000 0 0 625070000 1069600000 0 0 2776 288 2989 16268;16269;16270;16271;16272;16273;16274;16275;16276;16277;16278;16279;16280;16281;16282;16283;16284;16285 12319;12320;12321;12322;12323;12324;12325;12326;12327;12328;12329;12330;12331;12332;12333;12334;12335;12336;12337 12335 19 1208600000 715600000 0 0 861480000 1221000000 0 0 LKGLIYNE GWVITATPGPRHLMELKGLIYNEVHLHAPH GPRHLMELKGLIYNEVHLHAPHAEQLEGFT E L K N E V 0 0 1 0 0 0 1 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 8 1 0 0 948.52803 P36999 P36999 187 194 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 0.0042476 86.794 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 462140000 24984000 20124000 80051000 81795000 25782000 32260000 85440000 111710000 2777 352 2990 16286;16287;16288;16289;16290;16291;16292;16293;16294 12338;12339;12340;12341 12338 4 383880000 306890000 680180000 620130000 396940000 422870000 657570000 641070000 LKGNTGENLLALLEGR VLERQFRNYYKEAARLKGNTGENLLALLEG KGNTGENLLALLEGRLDNVVYRMGFGATRA R L K G R L 1 1 2 0 0 0 2 3 0 0 5 1 0 0 0 0 1 0 0 0 0 0 16 1 2 1 1696.9472 P0A7V8 P0A7V8 82 97 rpsD 30S ribosomal protein S4 yes yes 2;3 0 301.57 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1868700000 551460000 505200000 0 0 304250000 507820000 0 0 2778 130 2991 16295;16296;16297;16298;16299;16300;16301;16302 12342;12343;12344;12345;12346;12347;12348;12349;12350 12350 9 551460000 517130000 0 0 367020000 562550000 0 0 LKHGPLALIDADMPVIVVAPNNE KEISYIHAEAYAAGELKHGPLALIDADMPV IDADMPVIVVAPNNELLEKLKSNIEEVRAR E L K N E L 3 0 2 2 0 0 1 1 1 2 3 1 1 0 3 0 0 0 0 3 0 0 23 1 0 6 2425.3039 P17169 P17169 503 525 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 2.1858E-52 130.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 1114100000 11619000 11332000 0 0 526820000 530530000 2232200 31601000 2779 288 2992;2993 16303;16304;16305;16306;16307;16308;16309;16310;16311;16312;16313 12351;12352;12353;12354;12355;12356;12357 12353 240 7 178520000 172810000 0 0 8110900000 8040900000 17180000 181350000 LKHGPLALIDADMPVIVVAPNNELLE KEISYIHAEAYAAGELKHGPLALIDADMPV DMPVIVVAPNNELLEKLKSNIEEVRARGGQ E L K L E K 3 0 2 2 0 0 2 1 1 2 5 1 1 0 3 0 0 0 0 3 0 0 26 1 1 6 2780.5146 P17169 P17169 503 528 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 3.8745E-05 57.922 By MS/MS By MS/MS 1 1 72953000 0 0 0 0 35018000 37935000 0 0 2780 288 2994 16314;16315 12358;12359 12359 2 0 0 0 0 539130000 574960000 0 0 LKILEVLQEPDNHHVSAEDLYK NTALKKAGLKVTLPRLKILEVLQEPDNHHV QEPDNHHVSAEDLYKRLIDMGEEIGLATVY R L K Y K R 1 0 1 2 0 1 3 0 2 1 4 2 0 0 1 1 0 0 1 2 0 0 22 1 3 2 2589.3439 P0A9A9 P0A9A9 20 41 fur Ferric uptake regulation protein yes yes 4 1.1591E-10 78.324 By MS/MS By MS/MS By MS/MS 1 1 1 36187000 15486000 15141000 0 0 0 5560600 0 0 2781 162 2995 16316;16317;16318 12360;12361 12360 2 15486000 15498000 0 0 0 6160000 0 0 LKKPLYILATADEETSMAGAR FAFILDALRDVDVTKLKKPLYILATADEET ILATADEETSMAGARYFAETTALRPDCAII K L K A R Y 4 1 0 1 0 0 2 1 0 1 3 2 1 0 1 1 2 0 1 0 0 0 21 2 2 5 2277.2039 P23908 P23908 132 152 argE Acetylornithine deacetylase yes yes 3;4 1.3488E-52 136.61 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 4 4 609920000 136890000 106270000 0 0 191300000 175450000 0 0 2782 308 2996;2997 16319;16320;16321;16322;16323;16324;16325;16326;16327;16328;16329;16330;16331;16332;16333 12362;12363;12364;12365;12366;12367;12368;12369;12370;12371;12372;12373;12374 12372 255 13 136890000 108770000 0 0 230770000 194360000 0 0 LKLDHLGK REGRGCDGPWGPHAKLKLDHLGKEVLESRL PWGPHAKLKLDHLGKEVLESRLPGILELSR K L K G K E 0 0 0 1 0 0 0 1 1 0 3 2 0 0 0 0 0 0 0 0 0 0 8 1 0 0 922.56 P0AC41 P0AC41 313 320 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 3.8561E-11 99.442 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 147620000 47108000 42175000 0 0 33322000 25018000 0 0 2783 203 2998 16334;16335;16336;16337 12375;12376;12377;12378 12376 0 47108000 43171000 0 0 40196000 27714000 0 0 LKLDHLGKEVLESR REGRGCDGPWGPHAKLKLDHLGKEVLESRL KLKLDHLGKEVLESRLPGILELSRTFAHVD K L K S R L 0 1 0 1 0 0 2 1 1 0 4 2 0 0 0 1 0 0 0 1 0 0 14 2 2 0 1635.9308 P0AC41 P0AC41 313 326 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 4 0.011328 27.029 By MS/MS By matching By matching 1 1 1 11318000 0 7213200 0 0 1712500 2392600 0 0 2784 203 2999 16338;16339;16340 12379 12379 1 0 7383500 0 0 2065700 2650400 0 0 LKNTPVSE ______________________________ ______________________________ E L K S E L 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 1 0 1 886.476 P0AG30 P0AG30 6 13 rho Transcription termination factor Rho yes yes 2 0.018473 68.915 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 14604000 3853200 3776100 0 0 2730000 4244300 0 0 2785 256 3000 16341;16342;16343;16344;16345 12380 12380 0 54626000 57586000 0 0 42032000 64329000 0 0 LKPDPSDRRTGRSRQSSE ______________________________ DPSDRRTGRSRQSSERSERTERGEPQINFD E L K S E R 0 4 0 2 0 1 1 1 0 0 1 1 0 0 2 4 1 0 0 0 0 0 18 5 0 2 2071.0519 P11557 P11557 10 27 damX Cell division protein DamX yes yes 4 0.010724 20.091 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 32572000 2630400 2873600 8090400 7976300 1136100 1241100 0 8624400 2786 277 3001 16346;16347;16348;16349;16350;16351;16352 12381;12382;12383;12384 12383 4 40415000 43822000 68743000 60473000 17492000 18811000 0 49494000 LKQGGTLRE SETDTEVIAHLVNWELKQGGTLREAVLRAI HLVNWELKQGGTLREAVLRAIPQLRGAYGT E L K R E A 0 1 0 0 0 1 1 2 0 0 2 1 0 0 0 0 1 0 0 0 0 0 9 2 0 0 1000.5665 P17169 P17169 136 144 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 0.00027429 87.308 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 2 2 3779000000 59350000 43114000 760470000 839940000 37113000 25557000 935180000 1078300000 2787 288 3002 16353;16354;16355;16356;16357;16358;16359;16360;16361;16362;16363;16364 12385;12386;12387;12388;12389;12390;12391;12392 12386 7 911890000 657490000 6461600000 6368000000 571390000 387360000 7197400000 6188200000 LKQSLGR PVLLSGNHAEIRRWRLKQSLGRTWLRRPEL HAEIRRWRLKQSLGRTWLRRPELLENLALT R L K G R T 0 1 0 0 0 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 7 1 0 0 800.48684 P0A873 P0A873 209 215 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 0.0074017 76.847 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14689000 5520800 7171500 0 0 1241300 755490 0 0 2788 140 3003 16365;16366;16367;16368 12393;12394 12394 1 5520800 7340800 0 0 1497400 836920 0 0 LKSLSDTLEE ______________________________ HLRAELKSLSDTLEEVLSSSGEKSKEELSK E L K E E V 0 0 0 1 0 0 2 0 0 0 3 1 0 0 0 2 1 0 0 0 0 0 10 1 1 0 1133.5816 P64581 P64581 14 23 yqjD Uncharacterized protein YqjD yes yes 2 0.0049573 61.962 By MS/MS 1 0 0 0 0 0 0 0 0 0 2789 397 3004 16369 12395 12395 1 0 0 0 0 0 0 0 0 LKSNIEEVR MPVIVVAPNNELLEKLKSNIEEVRARGGQL NELLEKLKSNIEEVRARGGQLYVFADQDAG K L K V R A 0 1 1 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 2 0 1086.6033 P17169 P17169 530 538 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 1.1539E-13 147.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 4 3082500000 987120000 1041800000 0 0 525810000 527820000 0 0 2790 288 3005 16370;16371;16372;16373;16374;16375;16376;16377;16378;16379;16380 12396;12397;12398;12399;12400;12401;12402 12398 7 987120000 1066400000 0 0 634280000 591000000 0 0 LKSNIEEVRAR MPVIVVAPNNELLEKLKSNIEEVRARGGQL LLEKLKSNIEEVRARGGQLYVFADQDAGFV K L K A R G 1 2 1 0 0 0 2 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 11 2 2 1 1313.7415 P17169 P17169 530 540 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 0.0066125 22.917 By MS/MS 1 0 0 0 0 0 0 0 0 0 2791 288 3006 16381 12403 12403 1 0 0 0 0 0 0 0 0 LKVKTLRYFNE HPKAIMVCDEPSTMELKVKTLRYFNELEAE STMELKVKTLRYFNELEAENIKGL______ E L K N E L 0 1 1 0 0 0 1 0 0 0 2 2 0 1 0 0 1 0 1 1 0 0 11 3 0 0 1409.8031 P0A759 P0A759 247 257 nagB Glucosamine-6-phosphate deaminase yes yes 3 0.0070902 46.001 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 100670000 9221900 13126000 6174900 8449200 14431000 7594300 15004000 26669000 2792 96 3007 16382;16383;16384;16385;16386;16387;16388;16389 12404 12404 1 141690000 200170000 52467000 64058000 222170000 115100000 115480000 153050000 LKVKTLRYFNELE HPKAIMVCDEPSTMELKVKTLRYFNELEAE MELKVKTLRYFNELEAENIKGL________ E L K L E A 0 1 1 0 0 0 2 0 0 0 3 2 0 1 0 0 1 0 1 1 0 0 13 3 1 0 1651.9297 P0A759 P0A759 247 259 nagB Glucosamine-6-phosphate deaminase yes yes 3 0.0020028 42.095 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12530000 1526600 1628100 0 0 4971600 4403800 0 0 2793 96 3008 16390;16391;16392;16393 12405;12406;12407 12407 3 23456000 24829000 0 0 76542000 66747000 0 0 LKVPGETQTGK LGGEIEVPTLDGRVKLKVPGETQTGKLFRM GRVKLKVPGETQTGKLFRMRGKGVKSVRGG K L K G K L 0 0 0 0 0 1 1 2 0 0 1 2 0 0 1 0 2 0 0 1 0 0 11 1 1 1 1156.6452 P08622 P08622 291 301 dnaJ Chaperone protein DnaJ yes yes 2;3 4.8128E-18 120.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 463660000 120560000 144750000 0 0 105070000 93286000 0 0 2794 61 3009 16394;16395;16396;16397;16398;16399;16400;16401 12408;12409;12410;12411;12412;12413;12414;12415 12410 8 120560000 148160000 0 0 126750000 103340000 0 0 LKVSAEEK GEAPVCAQPLLIPLRLKVSAEEKSALEKAQ PLLIPLRLKVSAEEKSALEKAQSALAELGI R L K E K S 1 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 8 1 2 1 902.5073 P23367 P23367 490 497 mutL DNA mismatch repair protein MutL yes yes 2 0.010341 66.073 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 8391900 2667900 3038900 0 0 1154700 1530300 0 0 2795 302 3010 16402;16403;16404;16405 12416 12416 1 2667900 3110700 0 0 1393000 1695300 0 0 LKYENEVALR LLQIDNARLAADDFRLKYENEVALRQSVEA ADDFRLKYENEVALRQSVEADINGLRRVLD R L K L R Q 1 1 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 1 2 1 1233.6717 CON__P13645 CON__P13645 236 245 yes yes 2;3 1.7498E-76 182.28 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1296200000 174960000 234170000 0 0 467860000 419220000 0 0 + 2796 12 3011 16406;16407;16408;16409;16410;16411;16412;16413;16414 12417;12418;12419;12420;12421;12422;12423;12424;12425 12421 9 174960000 262900000 0 0 564380000 464400000 0 0 LLAALIQMADGER ISGGPGTGKTTTVAKLLAALIQMADGERCR AKLLAALIQMADGERCRIRLAAPTGKAAAR K L L E R C 3 1 0 1 0 1 1 1 0 1 3 0 1 0 0 0 0 0 0 0 0 0 13 0 1 3 1399.7493 P04993 P04993 184 196 recD RecBCD enzyme subunit RecD yes yes 2 4.5033E-14 120.68 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 60086000 19902000 14668000 0 0 12881000 12635000 0 0 2797 46 3012 16415;16416;16417;16418 12426;12427;12428 12428 3 19902000 15014000 0 0 15539000 13997000 0 0 LLAEHNLDASAIK LEEQNNDALSPAIRRLLAEHNLDASAIKGT RRLLAEHNLDASAIKGTGVGGRLTREDVEK R L L I K G 3 0 1 1 0 0 1 0 1 1 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1 3 1393.7565 P0AFG6 P0AFG6 121 133 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 2;3 5.907E-05 60.401 By MS/MS By MS/MS By MS/MS 1 1 1 15470000 8569000 0 0 0 6900900 0 0 0 2798 247 3013 16419;16420;16421 12429;12430;12431 12431 3 8569000 0 0 0 8324600 0 0 0 LLAEIAE IATLDDSAKSAEIKELLAEIAELSDKVTFK AKSAEIKELLAEIAELSDKVTFKEDNSLPV E L L A E L 2 0 0 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 1 2 757.42217 P35340 P35340 39 45 ahpF Alkyl hydroperoxide reductase subunit F yes yes 1 0.0097017 64.563 By matching By matching By MS/MS By matching 1 1 1 1 13209000 0 0 3084700 3264600 0 0 2793600 4066200 2799 348 3014 16422;16423;16424;16425 12432 12432 0 0 0 26210000 24751000 0 0 21500000 23335000 LLALLAER PLLALREKISALDEKLLALLAERRELAVEV ISALDEKLLALLAERRELAVEVGKAKLLSH K L L E R R 2 1 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8 0 1 2 897.56475 P0A9J8 P0A9J8 21 28 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 1.3748E-17 139.31 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 981430000 400630000 195910000 786880 1361500 195440000 187310000 0 0 2800 166 3015 16426;16427;16428;16429;16430;16431 12433;12434;12435;12436 12434 4 400630000 200530000 6686000 10323000 235760000 207490000 0 0 LLANQEEGTQIR ______________________________ FAKLLANQEEGTQIRVFVINPGTPNAECGV K L L I R V 1 1 1 0 0 2 2 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 12 0 2 1 1370.7154 P63020 P63020 15 26 nfuA Fe/S biogenesis protein NfuA yes yes 2 1.8458E-05 78.939 By MS/MS By MS/MS 1 1 8917900 0 8917900 0 0 0 0 0 0 2801 392 3016 16432;16433 12437;12438 12438 2 0 9128400 0 0 0 0 0 0 LLATLLLNQTNPVDLSSLHQQNAVPPR VRNLDLPGFTPAQKKLLATLLLNQTNPVDL VDLSSLHQQNAVPPRVAEQLCRLLRLAIIF K L L P R V 2 1 3 1 0 3 0 0 1 0 7 0 0 0 3 2 2 0 0 2 0 0 27 0 0 5 2951.6193 P25552 P25552 396 422 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 3 1.1027E-85 157.07 By MS/MS By MS/MS By MS/MS 1 1 1 74080000 15917000 0 0 0 23954000 34208000 0 0 2802 316 3017 16434;16435;16436 12439;12440;12441 12441 3 15917000 0 0 0 28896000 37895000 0 0 LLAWAEEEAR LVVMPQARGLNVGSKLLAWAEEEARQAGAE NVGSKLLAWAEEEARQAGAEMTELSTNVKR K L L A R Q 3 1 0 0 0 0 3 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 10 0 3 3 1186.5982 P16691 P16691 97 106 phnO Protein PhnO yes yes 2 2.1473E-10 120.15 By MS/MS By MS/MS 1 1 51774000 31751000 0 0 0 20023000 0 0 0 2803 286 3018 16437;16438 12442;12443 12442 2 31751000 0 0 0 24153000 0 0 0 LLDAGVR SGLYPVVDSVQWIERLLDAGVRTLQLRIKD DSVQWIERLLDAGVRTLQLRIKDRRDEEVE R L L V R T 1 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 0 0 1 742.43374 P30137 P30137 28 34 thiE Thiamine-phosphate synthase yes yes 2 0.0020382 97.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 3 3 305870000 92261000 91750000 5212400 0 66529000 50113000 0 0 2804 331 3019 16439;16440;16441;16442;16443;16444;16445;16446;16447;16448;16449;16450;16451 12444;12445;12446;12447;12448;12449;12450;12451;12452;12453 12445 10 92261000 93916000 44289000 0 80255000 55514000 0 0 LLDGLAK ILVMSNGGFGGIHQKLLDGLAKKAEAAQ__ GFGGIHQKLLDGLAKKAEAAQ_________ K L L A K K 1 0 0 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 0 1 728.44324 P37773 P37773 445 451 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.00073019 105.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 108790000 35442000 41642000 0 0 29069000 2638300 0 0 2805 360 3020 16452;16453;16454;16455;16456 12454;12455;12456 12455 3 35442000 45704000 0 0 35066000 3760900 0 0 LLDIDINDPLAVR PRHLPKNIDVDDMNRLLDIDINDPLAVRDR NRLLDIDINDPLAVRDRAMLEVMYGAGLRL R L L V R D 1 1 1 3 0 0 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 13 0 0 2 1465.814 P0A8P6 P0A8P6 122 134 xerC Tyrosine recombinase XerC yes yes 2 5.2627E-70 171.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 108630000 24008000 29422000 0 0 22326000 32877000 0 0 2806 150 3021 16457;16458;16459;16460 12457;12458;12459;12460 12460 4 24008000 30116000 0 0 26932000 36421000 0 0 LLDKEEMPLQR GARQMGYQAAKLLHRLLDKEEMPLQRILVP LLHRLLDKEEMPLQRILVPPVRVIERRSTD R L L Q R I 0 1 0 1 0 1 2 0 0 0 3 1 1 0 1 0 0 0 0 0 0 0 11 1 2 1 1370.7228 P0ACI3 P0ACI3 253 263 xylR Xylose operon regulatory protein yes yes 3 5.0174E-06 71.555 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35829000 0 10466000 0 0 13825000 11539000 0 0 2807 212 3022 16461;16462;16463;16464 12461;12462;12463;12464 12461 4 0 10713000 0 0 16677000 12782000 0 0 LLDLAAPDIIVR DLYRRVINRNNRLKRLLDLAAPDIIVRNEK LKRLLDLAAPDIIVRNEKRMLQEAVDALLD R L L V R N 2 1 0 2 0 0 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 12 0 0 3 1307.7813 P0A8T7 P0A8T7 282 293 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.3818E-06 91.584 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 86929000 25475000 23294000 0 0 14825000 23335000 0 0 2808 153 3023 16465;16466;16467;16468 12465;12466;12467;12468 12465 4 25475000 23844000 0 0 17883000 25850000 0 0 LLDLEHQNAVK KLRGGVDVLVATPGRLLDLEHQNAVKLDQV TPGRLLDLEHQNAVKLDQVEILVLDEADRM R L L V K L 1 0 1 1 0 1 1 0 1 0 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1 1 1278.6932 P25888 P25888 136 146 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 1.0698E-64 177.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 862990000 200310000 282350000 0 0 193270000 187060000 0 0 2809 318 3024 16469;16470;16471;16472;16473;16474;16475;16476 12469;12470;12471;12472;12473;12474;12475;12476;12477 12470 9 200310000 289020000 0 0 233140000 207220000 0 0 LLDNAAADLAAISGQK ITLNMGVGEAIADKKLLDNAAADLAAISGQ LDNAAADLAAISGQKPLITKARKSVAGFKI K L L Q K P 5 0 1 2 0 1 0 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 16 0 0 5 1569.8362 P62399 P62399 49 64 rplE 50S ribosomal protein L5 yes yes 2 4.968E-19 134.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38561000 3899200 4053500 0 0 4316400 26292000 0 0 2810 388 3025 16477;16478;16479;16480 12478;12479;12480 12480 3 3899200 4149200 0 0 5206900 29126000 0 0 LLDNAAADLAAISGQKPLITK ITLNMGVGEAIADKKLLDNAAADLAAISGQ ADLAAISGQKPLITKARKSVAGFKIRQGYP K L L T K A 5 0 1 2 0 1 0 1 0 2 4 2 0 0 1 1 1 0 0 0 0 0 21 1 0 6 2122.1998 P62399 P62399 49 69 rplE 50S ribosomal protein L5 yes yes 2;3 1.3029E-45 117.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 158550000 42278000 43967000 0 0 35789000 36516000 0 0 2811 388 3026 16481;16482;16483;16484;16485;16486;16487;16488 12481;12482;12483;12484;12485;12486;12487 12485 7 42278000 45005000 0 0 43172000 40452000 0 0 LLDNLLTK DSNRYTTYIPVQDPKLLDNLLTKNVKVVGE IPVQDPKLLDNLLTKNVKVVGEPPEEPSLL K L L T K N 0 0 1 1 0 0 0 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 8 0 0 0 928.55933 P0AAI3 P0AAI3 77 84 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 2 0.0013608 94.114 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 35749000 12018000 7427900 0 0 7952300 8350200 0 0 2812 185 3027 16489;16490;16491;16492;16493 12488;12489;12490;12491 12488 4 12018000 7603200 0 0 9592900 9427800 0 0 LLDYLKR HSRRGLLRMVSQRRKLLDYLKRKDVARYTQ RMVSQRRKLLDYLKRKDVARYTQLIERLGL K L L K R K 0 1 0 1 0 0 0 0 0 0 3 1 0 0 0 0 0 0 1 0 0 0 7 1 0 0 919.5491 P0ADZ4 P0ADZ4 66 72 rpsO 30S ribosomal protein S15 yes yes 2 9.3773E-58 175.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 278740000 100220000 76773000 0 0 39961000 61790000 0 0 2813 231 3028 16494;16495;16496;16497 12492;12493;12494;12495 12493 3 100220000 78585000 0 0 48205000 68449000 0 0 LLEGEDAHLSSSQFSSGSQSSR DVKTRLEQEIATYRRLLEGEDAHLSSSQFS HLSSSQFSSGSQSSRDVTSSSRQIRTKVMD R L L S R D 1 1 0 1 0 2 2 2 1 0 3 0 0 1 0 8 0 0 0 0 0 0 22 0 2 1 2308.0567 CON__P02533;CON__Q61782 CON__P02533 418 439 yes no 3 2.5413E-62 125.73 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55347000 11004000 7407500 0 0 18715000 18221000 0 0 + 2814 4 3029 16498;16499;16500;16501 12496;12497;12498;12499 12498 4 11004000 7582300 0 0 22576000 20185000 0 0 LLEGEECR NVKLALDVEIATYRKLLEGEECRMSGDLSS EIATYRKLLEGEECRMSGDLSSNVTVSVTS K L L C R M 0 1 0 0 1 0 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 0 3 0 1004.4597 CON__P35908v2;CON__P35908;CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__P13647;CON__Q32MB2;CON__Q7RTS7 CON__P35908v2 483 490 no no 2 0.0019114 89.142 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28579000 4776900 7099400 0 0 8280700 8421600 0 0 + 2815 16;13;5;18 3030 16502;16503;16504;16505 12500;12501;12502;12503 12503 4 4776900 7267000 0 0 9989100 9329200 0 0 LLEKLKSNIEE IDADMPVIVVAPNNELLEKLKSNIEEVRAR PNNELLEKLKSNIEEVRARGGQLYVFADQD E L L E E V 0 0 1 0 0 0 3 0 0 1 3 2 0 0 0 1 0 0 0 0 0 0 11 2 2 0 1314.7395 P17169 P17169 526 536 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 2.085E-34 121.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 2 2 173010000 12537000 12520000 11654000 29002000 18079000 17371000 28070000 43776000 2816 288 3031 16506;16507;16508;16509;16510;16511;16512;16513;16514;16515;16516;16517;16518;16519;16520 12504;12505;12506;12507;12508 12505 4 192630000 190930000 99018000 219880000 278340000 263290000 216030000 251220000 LLENRNKMLK QEILLTRLCMHMQSKLLENRNKMLKAQGIN HMQSKLLENRNKMLKAQGINETLFMALITL K L L L K A 0 1 2 0 0 0 1 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 10 2 1 0 1257.7227 P0ACR9 P0ACR9 40 49 mprA Transcriptional repressor MprA yes yes 2 0.022871 57.047 By MS/MS By MS/MS 1 1 23738000 12192000 11546000 0 0 0 0 0 0 2817 219 3032 16521;16522 12509 12509 1 12192000 11819000 0 0 0 0 0 0 LLENTELSAREIAEKA AIGSGGPYAQAAARALLENTELSAREIAEK LENTELSAREIAEKALDIAGDICIYTNHFH A L L K A L 3 1 1 0 0 0 4 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 16 2 4 2 1785.9472 P0A7B8 P0A7B8 137 152 hslV ATP-dependent protease subunit HslV yes yes 3 0.005422 37.156 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10249000 1041000 904000 0 0 3581500 4722100 0 0 2818 100 3033 16523;16524;16525;16526 12510;12511 12510 2 6284100 5410400 0 0 5098900 6731300 0 0 LLEVTPR LARNENHAARHGVDKLLEVTPRHPEVLRLA AARHGVDKLLEVTPRHPEVLRLAEQAYIRT K L L P R H 0 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 7 0 1 1 826.49125 P0ACB7 P0ACB7 179 185 hemY Protein HemY yes yes 2 0.0062417 60.799 By MS/MS By MS/MS 1 1 7608100 0 4627600 0 0 2980500 0 0 0 2819 208 3034 16527;16528 12512 12512 1 0 4736900 0 0 3595300 0 0 0 LLFQGVQR LRYKGMLWIDGEPNRLLFQGVQRLYSADWD IDGEPNRLLFQGVQRLYSADWDRPWGDEKP R L L Q R L 0 1 0 0 0 2 0 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 0 0 959.55525 P24203 P24203 271 278 yjiA Uncharacterized GTP-binding protein YjiA yes yes 2 0.0026835 77.748 By MS/MS By MS/MS By matching By matching 1 1 1 1 17242000 4759100 5414500 0 0 3104100 3964400 0 0 2820 311 3035 16529;16530;16531;16532 12513;12514 12513 2 4759100 5542300 0 0 3744500 4391700 0 0 LLGAQPGSQR EQKKRIPEDASTLHRLLGAQPGSQRLRHHA STLHRLLGAQPGSQRLRHHAGNPLHLDVLV R L L Q R L 1 1 0 0 0 2 0 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 10 0 0 2 1025.5618 P04993 P04993 243 252 recD RecBCD enzyme subunit RecD yes yes 2 9.4966E-09 117.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38587000 9454600 11947000 0 0 8968700 8216800 0 0 2821 46 3036 16533;16534;16535;16536 12515;12516;12517;12518 12517 4 9454600 12229000 0 0 10819000 9102400 0 0 LLGGSEVTR MQSLNKKARLQELARLLGGSEVTRNTLANA LQELARLLGGSEVTRNTLANAKELLAA___ R L L T R N 0 1 0 0 0 0 1 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 1 0 930.51345 P05824 P05824 533 541 recN DNA repair protein RecN yes yes 2 0.0010768 89.698 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 40952000 14071000 12278000 0 0 7296600 7305300 0 0 2822 49 3037 16537;16538;16539;16540 12519;12520;12521 12521 3 14071000 12568000 0 0 8801900 8092600 0 0 LLGQTSVDR SCYIPPSTTIKQDFRLLGQTSVDRLLQLSQ IKQDFRLLGQTSVDRLLQLSQGQAVKGNQL R L L D R L 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 0 0 987.53491 B8LFD5;P03023 B8LFD5 298 306 lacI Lactose operon repressor yes no 2 0.0021274 71.379 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 42282000 10044000 10370000 0 0 6386700 15481000 0 0 2823 0 3038 16541;16542;16543;16544;16545;16546;16547;16548 12522;12523;12524;12525 12524 4 30335000 34244000 0 0 8349300 20573000 0 0 LLGTAAFR VLVETSFITNPEEERLLGTAAFRQKIATAI TNPEEERLLGTAAFRQKIATAIAEGVISYF R L L F R Q 2 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 8 0 0 2 847.49159 P36548 P36548 254 261 amiA N-acetylmuramoyl-L-alanine amidase AmiA yes yes 2 0.0013771 70.912 By MS/MS By MS/MS By MS/MS 1 1 1 16903000 7396200 0 0 0 9507200 0 0 0 2824 349 3039 16549;16550;16551 12526;12527;12528 12527 3 7396200 0 0 0 11469000 0 0 0 LLGTQYISK AAANIAQLTVNRYQKLLGTQYISKQEYDQA VNRYQKLLGTQYISKQEYDQALADAQQANA K L L S K Q 0 0 0 0 0 1 0 1 0 1 2 1 0 0 0 1 1 0 1 0 0 0 9 0 0 0 1021.5808 P0AE06 P0AE06 132 140 acrA Multidrug efflux pump subunit AcrA yes yes 2 4.4368E-05 89.698 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22447000 0 5263200 0 0 7125800 10058000 0 0 2825 232 3040 16552;16553;16554;16555 12529;12530;12531;12532 12529 4 0 5387400 0 0 8595900 11142000 0 0 LLHDIEK RLGLLEQRDTAMLHRLLHDIEKNITK____ RDTAMLHRLLHDIEKNITK___________ R L L E K N 0 0 0 1 0 0 1 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 7 0 1 0 866.48617 P37005 P37005 218 224 lasT Uncharacterized tRNA/rRNA methyltransferase LasT yes yes 2 0.00086756 104.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28517000 6816800 9132200 0 0 7503300 5065100 0 0 2826 353 3041 16556;16557;16558;16559 12533;12534;12535;12536 12533 4 6816800 9347800 0 0 9051200 5611000 0 0 LLHNPLEIEVAR FSATFSDDIKALAEKLLHNPLEIEVARRNT AEKLLHNPLEIEVARRNTASDQVTQHVHFV K L L A R R 1 1 1 0 0 0 2 0 1 1 3 0 0 0 1 0 0 0 0 1 0 0 12 0 2 2 1402.7932 P25888 P25888 201 212 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 7.1722E-71 151.98 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 850800000 206780000 206830000 0 0 194850000 242350000 0 0 2827 318 3042 16560;16561;16562;16563;16564;16565;16566;16567 12537;12538;12539;12540;12541;12542;12543;12544 12543 8 206780000 211710000 0 0 235040000 268470000 0 0 LLHQANAGASVAR VEIAKYYAENYPHVRLLHQANAGASVARNR VRLLHQANAGASVARNRGIEVATGKYVAFV R L L A R N 4 1 1 0 0 1 0 1 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 0 4 1306.7106 P11290 P11290 65 77 yibD Uncharacterized glycosyltransferase YibD yes yes 3 7.7175E-07 80.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24855000 6218200 9417500 0 0 5527200 3691700 0 0 2828 275 3043 16568;16569;16570;16571 12545;12546;12547 12545 2 6218200 9639800 0 0 6667400 4089600 0 0 LLIEEEAAK QKQKARKLKIKDAMKLLIEEEAAKLVNPEE IKDAMKLLIEEEAAKLVNPEELKQDAIDAV K L L A K L 2 0 0 0 0 0 3 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 9 0 3 2 1014.5597 P0A6H5 P0A6H5 224 232 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.00074768 93.374 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 63937000 15016000 16234000 0 0 15277000 17410000 0 0 2829 71 3044 16572;16573;16574;16575 12548;12549;12550;12551 12551 4 15016000 16617000 0 0 18429000 19287000 0 0 LLIEPTGLGHPK QVGLNTLLRQGKPDRLLIEPTGLGHPKQIL PDRLLIEPTGLGHPKQILDLLTAPVYEPWI R L L P K Q 0 0 0 0 0 0 1 2 1 1 3 1 0 0 2 0 1 0 0 0 0 0 12 0 1 2 1273.7394 P33030 P33030 88 99 yeiR Uncharacterized protein YeiR yes yes 2;3 3.6577E-08 91.867 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 193170000 58446000 48542000 0 0 37712000 48466000 0 0 2830 343 3045 16576;16577;16578;16579;16580;16581;16582;16583 12552;12553;12554;12555;12556;12557;12558;12559;12560 12554 9 58446000 49687000 0 0 45492000 53689000 0 0 LLIPIRR EDAKAGDRPINLRCELLIPIRR________ RPINLRCELLIPIRR_______________ E L L R R - 0 2 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 7 1 0 1 879.60181 P0ACI0 P0ACI0 283 289 rob Right origin-binding protein yes yes 2 0.016146 71.995 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 101140000 7130000 6818400 23884000 19728000 5698200 3745700 15066000 19065000 2831 211 3046 16584;16585;16586;16587;16588;16589;16590;16591 12561;12562;12563 12561 3 109550000 103980000 202940000 149570000 87728000 56772000 115950000 109410000 LLKTFLE ______________________________ ______________________________ E L L L E V 0 0 0 0 0 0 1 0 0 0 3 1 0 1 0 0 1 0 0 0 0 0 7 1 0 0 862.51641 P0A8R9 P0A8R9 5 11 hdfR HTH-type transcriptional regulator HdfR yes yes 2 0.018596 60.76 By MS/MS 1 3500500 0 0 0 0 0 0 0 3500500 2832 152 3047 16592 12564 12564 1 0 0 0 0 0 0 0 20089000 LLKTPNLGKKSLTE AIHYIGDLVQRTEVELLKTPNLGKKSLTEI ELLKTPNLGKKSLTEIKDVLASRGLSLGMR E L L T E I 0 0 1 0 0 0 1 1 0 0 4 3 0 0 1 1 2 0 0 0 0 0 14 3 0 1 1540.9188 P0A7Z4 P0A7Z4 289 302 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3;4 0.00095446 55.314 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 209050000 8813100 9832300 40410000 32059000 4363900 4800400 42017000 66751000 2833 135 3048 16593;16594;16595;16596;16597;16598;16599;16600;16601;16602;16603;16604;16605;16606;16607;16608 12565;12566;12567;12568;12569;12570;12571 12565 7 135410000 149940000 343360000 243060000 67187000 72758000 323370000 383070000 LLLDQALLAE AADTEDEAKFSEWVELLLDQALLAERGTLE SEWVELLLDQALLAERGTLEDPNLFIRRMN E L L A E R 2 0 0 1 0 1 1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 10 0 0 2 1097.6332 P0A6Z3 P0A6Z3 595 604 htpG Chaperone protein HtpG yes yes 2 0.0038112 80.229 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 15506000 4344400 4025400 0 0 2989400 0 4146800 0 2834 88 3049 16609;16610;16611;16612 12572 12572 1 66750000 61388000 0 0 46024000 0 31915000 0 LLLEYLEEK ILGYWKIKGLVQPTRLLLEYLEEKYEEHLY LVQPTRLLLEYLEEKYEEHLYERDEGDKWR R L L E K Y 0 0 0 0 0 0 3 0 0 0 4 1 0 0 0 0 0 0 1 0 0 0 9 0 3 0 1148.6329 GST-Nek6 GST-Nek6 19 27 yes yes 2 4.0308E-10 125.31 By MS/MS By MS/MS 1 1 560820000 0 0 0 0 229170000 331650000 0 0 2835 23 3050 16613;16614 12573;12574 12574 2 0 0 0 0 276440000 367390000 0 0 LLLEYLEEKYEEHLYER ILGYWKIKGLVQPTRLLLEYLEEKYEEHLY LEYLEEKYEEHLYERDEGDKWRNKKFELGL R L L E R D 0 1 0 0 0 0 6 0 1 0 5 1 0 0 0 0 0 0 3 0 0 0 17 1 6 0 2268.1314 GST-Nek6 GST-Nek6 19 35 yes yes 4 7.1672E-21 115.6 By MS/MS By MS/MS 1 1 139790000 0 0 0 0 56960000 82832000 0 0 2836 23 3051 16615;16616 12575;12576 12576 2 0 0 0 0 68710000 91760000 0 0 LLLEYLEEKYEEHLYERDEGDK ILGYWKIKGLVQPTRLLLEYLEEKYEEHLY EKYEEHLYERDEGDKWRNKKFELGLEFPNL R L L D K W 0 1 0 2 0 0 7 1 1 0 5 2 0 0 0 0 0 0 3 0 0 0 22 2 7 0 2812.3443 GST-Nek6 GST-Nek6 19 40 yes yes 4 0.01503 21.599 By matching By MS/MS 1 1 9257300 0 0 0 0 5079700 4177600 0 0 2837 23 3052 16617;16618 12577 12577 0 0 0 0 0 6127600 4627800 0 0 LLLPIPR QQIIIDGLKRQYDDRLLLPIPRLKTNNPEQ LKRQYDDRLLLPIPRLKTNNPEQLEKVLRQ R L L P R L 0 1 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 0 0 0 0 0 7 0 0 2 820.55346 P0ACB7 P0ACB7 298 304 hemY Protein HemY yes yes 2 0.0135 52.231 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12048000 2625200 2600600 0 0 2349900 4472500 0 0 2838 208 3053 16619;16620;16621;16622 12578;12579;12580 12578 3 2625200 2661900 0 0 2834700 4954500 0 0 LLLTPNVPATRE YGEVNIDQLTTPIQELLLTPNVPATREAVH IQELLLTPNVPATREAVHAINEADLIIIGP E L L R E A 1 1 1 0 0 0 1 0 0 0 3 0 0 0 2 0 2 0 0 1 0 0 12 1 0 3 1322.7558 P75767 P75767 164 175 ybhK Putative gluconeogenesis factor yes yes 2 0.0093781 45.137 By matching By MS/MS 1 1 3825600 0 0 0 0 0 0 1276400 2549200 2839 407 3054 16623;16624 12581 12581 1 0 0 0 0 0 0 9823200 14629000 LLLVELEEEK VVLSNPPALPPRTHRLLLVELEEEKWIADV PRTHRLLLVELEEEKWIADVGFGGQTLTAP R L L E K W 0 0 0 0 0 0 4 0 0 0 4 1 0 0 0 0 0 0 0 1 0 0 10 0 4 0 1213.6806 P77567 P77567 109 118 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2 5.0549E-05 102.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27036000 4554200 4814700 0 0 6715600 10952000 0 0 2840 436 3055 16625;16626;16627;16628 12582;12583;12584;12585 12584 4 4554200 4928300 0 0 8101000 12132000 0 0 LLMQDLTFSQLR SPFEEQLIYANSAAKLLMQDLTFSQLRTGP AAKLLMQDLTFSQLRTGPYSVSSQKELPKY K L L L R T 0 1 0 1 0 2 0 0 0 0 4 0 1 1 0 1 1 0 0 0 0 0 12 0 0 0 1463.7806 P77302 P77302 35 46 ydaM Probable diguanylate cyclase YdaM yes yes 2 3.6984E-08 85.377 By MS/MS By matching By matching By MS/MS 1 1 1 2 53632000 15932000 19698000 0 0 8733100 9268600 0 0 2841 429 3056 16629;16630;16631;16632;16633 12586;12587 12587 2 15932000 20163000 0 0 10535000 10268000 0 0 LLNAGLGGSDNE APQVTAEDASASLAELLNAGLGGSDNE___ LAELLNAGLGGSDNE_______________ E L L N E - 1 0 2 1 0 0 1 3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 12 0 0 1 1158.5517 P0A8T7 P0A8T7 1396 1407 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0024358 55.531 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 37510000 3389900 4962000 6645600 7058200 2861900 3771900 792770 8028300 2842 153 3057 16634;16635;16636;16637;16638;16639;16640;16641 12588;12589;12590;12591 12590 4 52085000 75671000 56466000 53512000 44062000 57168000 6101300 46073000 LLNDTDMAIIDKR SPDIGGVVRARAIAKLLNDTDMAIIDKRRP AKLLNDTDMAIIDKRRPRANVSQVMHIIGD K L L K R R 1 1 1 3 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 13 1 0 1 1516.7919 P0A717 P0A717 183 195 prs Ribose-phosphate pyrophosphokinase yes yes 2;3 1.9183E-36 143.17 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 491730000 131540000 115870000 0 0 151020000 93293000 0 0 2843 91 3058;3059 16642;16643;16644;16645;16646;16647;16648;16649;16650;16651;16652;16653 12592;12593;12594;12595;12596;12597;12598;12599;12600;12601;12602;12603;12604 12596 99 13 131540000 118600000 0 0 182180000 103350000 0 0 LLNKMVNLKE EHWKKIVKTQEELKELLNKMVNLKEKIKEL EELKELLNKMVNLKEKIKELHQQYKEASEV E L L K E K 0 0 2 0 0 0 1 0 0 0 3 2 1 0 0 0 0 0 0 1 0 0 10 2 0 0 1200.69 LSD1-FL-His LSD1-FL-His 446 455 yes yes 2;3 4.3291E-48 182.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 5 5 4 5 4 5 3 12639000000 447550000 832150000 3363200000 2251000000 245710000 382780000 3160800000 1955800000 2844 24 3060;3061 16654;16655;16656;16657;16658;16659;16660;16661;16662;16663;16664;16665;16666;16667;16668;16669;16670;16671;16672;16673;16674;16675;16676;16677;16678;16679;16680;16681;16682;16683;16684;16685;16686;16687;16688;16689 12605;12606;12607;12608;12609;12610;12611;12612;12613;12614;12615;12616;12617;12618;12619;12620;12621;12622;12623;12624;12625;12626 12617 47 22 6841100000 12643000000 28577000000 17066000000 3782900000 5801600000 24326000000 11224000000 LLNKMVNLKEKIKE EHWKKIVKTQEELKELLNKMVNLKEKIKEL ELLNKMVNLKEKIKELHQQYKEASEVKPPR E L L K E L 0 0 2 0 0 0 2 0 0 1 3 4 1 0 0 0 0 0 0 1 0 0 14 4 1 0 1699.0066 LSD1-FL-His LSD1-FL-His 446 459 yes yes 2;3;4;5 9.2269E-164 218.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 10 6 6 6 5 6 7 22787000000 1628700000 1512400000 3022100000 3993600000 2184800000 1519500000 3812100000 5113900000 2845 24 3062;3063 16690;16691;16692;16693;16694;16695;16696;16697;16698;16699;16700;16701;16702;16703;16704;16705;16706;16707;16708;16709;16710;16711;16712;16713;16714;16715;16716;16717;16718;16719;16720;16721;16722;16723;16724;16725;16726;16727;16728;16729;16730;16731;16732;16733;16734;16735;16736;16737;16738;16739;16740;16741;16742;16743;16744 12627;12628;12629;12630;12631;12632;12633;12634;12635;12636;12637;12638;12639;12640;12641;12642;12643;12644;12645;12646;12647;12648;12649;12650;12651;12652;12653;12654;12655;12656;12657;12658;12659;12660;12661;12662;12663;12664;12665;12666;12667;12668 12653 47 41 24981000000 23047000000 25678000000 30278000000 33637000000 23030000000 29339000000 29348000000 LLNLLRE AKELREKSVEELNTELLNLLREQFNLRMQA SVEELNTELLNLLREQFNLRMQAASGQLQQ E L L R E Q 0 1 1 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 869.53345 P0A7M6 P0A7M6 18 24 rpmC 50S ribosomal protein L29 yes yes 2 0.018564 60.788 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 154590000 6356600 6867400 19195000 26810000 3455200 3815100 34457000 53630000 2846 114 3064 16745;16746;16747;16748;16749;16750;16751;16752 12669 12669 1 97667000 104730000 163100000 203260000 53196000 57824000 265190000 307770000 LLNSLAAVKSGTKAKRAQRPAKYSYVDE QYREMLIADGIDPNELLNSLAAVKSGTKAK AKRAQRPAKYSYVDENGETKTWTGQGRTPA E L L D E N 5 2 1 1 0 1 1 1 0 0 3 4 0 0 1 3 1 0 2 2 0 0 28 6 0 6 3063.6829 P0ACF8 P0ACF8 75 102 hns DNA-binding protein H-NS yes yes 4;5 6.1966E-22 89.197 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 1269200000 8617000 5535700 193580000 313020000 0 0 318640000 429840000 2847 210 3065 16753;16754;16755;16756;16757;16758;16759;16760;16761;16762;16763 12670;12671;12672;12673;12674;12675;12676;12677;12678;12679;12680;12681 12677 12 132400000 84420000 1644800000 2373100000 0 0 2452300000 2466800000 LLPEHDVAYDGNPLAQQHGPR RVTVDGEIVRNAAFKLLPEHDVAYDGNPLA VAYDGNPLAQQHGPRYFMLNKPQGYVCSTD K L L P R Y 2 1 1 2 0 2 1 2 2 0 3 0 0 0 3 0 0 0 1 1 0 0 21 0 1 5 2326.1454 P0AA43 P0AA43 41 61 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3;4 1.7049E-247 241.52 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 5612400000 1472000000 1513400000 0 0 1149700000 1477400000 0 0 2848 183 3066 16764;16765;16766;16767;16768;16769;16770;16771;16772;16773;16774;16775;16776 12682;12683;12684;12685;12686;12687;12688;12689;12690;12691;12692;12693 12686 11 1472000000 1549100000 0 0 1386900000 1636600000 0 0 LLPQAKDPE GMRVLYEKQDTAGSELLPQAKDPETTAQWI DTAGSELLPQAKDPETTAQWIERCLAGSEP E L L P E T 1 0 0 1 0 1 1 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 9 1 0 3 1009.5444 P30177 P30177 264 272 ybiB Uncharacterized protein YbiB yes yes 2 0.00026005 97.798 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 166620000 51385000 39104000 0 0 18647000 19562000 0 37923000 2849 332 3067 16777;16778;16779;16780;16781 12694;12695;12696;12697;12698 12694 5 789520000 596350000 0 0 287080000 296500000 0 217640000 LLPQVSLITPNLPEAAALLDAPHAR DPLLSPSAVATLRSRLLPQVSLITPNLPEA NLPEAAALLDAPHARTEQEMLEQGRSLLAM R L L A R T 5 1 1 1 0 1 1 0 1 1 6 0 0 0 4 1 1 0 0 1 0 0 25 0 1 9 2619.4748 P76422 P76422 129 153 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 3 1.2445E-40 110.68 By matching By matching By MS/MS By MS/MS 1 1 1 1 1220500000 120470000 117890000 0 0 465400000 516710000 0 0 2850 425 3068 16782;16783;16784;16785 12699;12700 12699 2 120470000 120670000 0 0 561410000 572390000 0 0 LLPSLYQLEK DLVIFGAKGDLARRKLLPSLYQLEKAGQLN LARRKLLPSLYQLEKAGQLNPDTRIIGVGR K L L E K A 0 0 0 0 0 1 1 0 0 0 4 1 0 0 1 1 0 0 1 0 0 0 10 0 1 1 1202.6911 P0AC53 P0AC53 26 35 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.0026278 46.891 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9344000 3090600 2466800 0 0 3786600 0 0 0 2851 205 3069 16786;16787;16788;16789 12701;12702 12702 2 3090600 2525000 0 0 4567800 0 0 0 LLPYAETLMSTWQAAR TRHRNNIRLTAAGEKLLPYAETLMSTWQAA LPYAETLMSTWQAARKEVAHTSRHNEFSIG K L L A R K 3 1 0 0 0 1 1 0 0 0 3 0 1 0 1 1 2 1 1 0 0 0 16 0 1 4 1849.9397 P0A8R9 P0A8R9 64 79 hdfR HTH-type transcriptional regulator HdfR yes yes 2 3.0197E-23 146.16 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 2 163030000 56527000 48262000 0 0 0 58237000 0 0 2852 152 3070;3071 16790;16791;16792;16793;16794;16795;16796;16797 12703;12704;12705;12706;12707;12708;12709 12708 152 6 56527000 56119000 0 0 0 64514000 0 0 LLQAPLIDQPLELR PQRLPKDLSEAQVERLLQAPLIDQPLELRD RLLQAPLIDQPLELRDKAMLEVLYATGLRV R L L L R D 1 1 0 1 0 2 1 0 0 1 5 0 0 0 2 0 0 0 0 0 0 0 14 0 1 3 1617.9454 P0A8P8 P0A8P8 121 134 xerD Tyrosine recombinase XerD yes yes 2 9.4461E-52 202.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1051800000 475040000 200450000 0 0 161280000 215060000 0 0 2853 151 3072 16798;16799;16800;16801 12710;12711;12712;12713 12710 4 475040000 205180000 0 0 194560000 238240000 0 0 LLQHLITRQP SAQTGTGKTAGFTLPLLQHLITRQPHAKGR GFTLPLLQHLITRQPHAKGRRPVRALILTP P L L Q P H 0 1 0 0 0 2 0 0 1 1 3 0 0 0 1 0 1 0 0 0 0 0 10 1 0 0 1217.7244 P25888 P25888 59 68 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 0.0038339 58.676 By matching By MS/MS By MS/MS 1 2 2 10224000 430860 0 0 0 6265000 3528100 0 0 2854 318 3073 16802;16803;16804;16805;16806 12714;12715 12714 1 2600900 0 0 0 8919400 5029300 0 0 LLQIYDVK DSYSTGNAAQAMLEKLLQIYDVKTLVAQLN AQAMLEKLLQIYDVKTLVAQLNGVGENHWS K L L V K T 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 0 0 0 1 1 0 0 8 0 0 0 990.57498 P0AED9 P0AED9 24 31 dcm DNA-cytosine methyltransferase yes yes 2 4.0278E-05 112.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 218170000 53186000 77734000 0 0 36531000 50723000 0 0 2855 235 3074 16807;16808;16809;16810 12716;12717;12718;12719 12716 4 53186000 79569000 0 0 44067000 56190000 0 0 LLQQVDTSTRTHNLEPYFE RFLEQQNQVLQTKWELLQQVDTSTRTHNLE VDTSTRTHNLEPYFESFINNLRRRVDQLKS E L L F E S 0 1 1 1 0 2 2 0 1 0 3 0 0 1 1 1 3 0 1 1 0 0 19 1 1 1 2290.123 CON__P04264 CON__P04264 214 232 yes yes 3 0.0012424 32.858 By MS/MS By MS/MS By MS/MS 1 1 1 15020000 0 0 0 4742500 4247800 6029400 0 0 + 2856 9 3075 16811;16812;16813 12720;12721 12721 2 0 0 0 35956000 65399000 91384000 0 0 LLRDYQELMNTK DLEDALQQAKEDLARLLRDYQELMNTKLAL LARLLRDYQELMNTKLALDLEIATYRTLLE R L L T K L 0 1 1 1 0 1 1 0 0 0 3 1 1 0 0 0 1 0 1 0 0 0 12 1 1 0 1522.7814 CON__P04264 CON__P04264 461 472 no no 3 1.2262E-08 90.412 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 70605000 16742000 9134800 0 0 23787000 20942000 0 0 + 2857 9 3076;3077 16814;16815;16816;16817;16818;16819 12722;12723;12724;12725;12726 12725 3 4 16742000 9350400 0 0 28694000 23199000 0 0 LLREDHYEVYGLDIGSDAISR ILGVNGFIGNHLTERLLREDHYEVYGLDIG YEVYGLDIGSDAISRFLNHPHFHFVEGDIS R L L S R F 1 2 0 3 0 0 2 2 1 2 3 0 0 0 0 2 0 0 2 1 0 0 21 1 2 1 2420.1972 P77398 P77398 335 355 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4 1.1157E-73 161.47 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 3 8788600000 2080500000 1761500000 0 0 2140800000 2805800000 0 0 2858 432 3078 16820;16821;16822;16823;16824;16825;16826;16827;16828;16829;16830;16831;16832;16833 12727;12728;12729;12730;12731;12732;12733;12734;12735;12736;12737 12730 11 2148300000 1817900000 0 0 2903900000 3187500000 0 0 LLREEFEQFPAEK QRQRSSILAAEETRRLLREEFEQFPAEKIE RRLLREEFEQFPAEKIEAVCHAIAAHSFSA R L L E K I 1 1 0 0 0 1 4 0 0 0 2 1 0 2 1 0 0 0 0 0 0 0 13 1 4 2 1634.8304 P46144 P46144 84 96 yedJ Uncharacterized protein YedJ yes yes 3 9.8336E-09 104.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 78194000 23592000 20286000 0 0 15026000 19291000 0 0 2859 371 3079 16834;16835;16836;16837 12738;12739;12740;12741 12738 3 23592000 20765000 0 0 18125000 21370000 0 0 LLRKKGIE TADSYAAAKSSPHLELLRKKGIEVLLLSDR KSSPHLELLRKKGIEVLLLSDRIDEWMMNY E L L I E V 0 1 0 0 0 0 1 1 0 1 2 2 0 0 0 0 0 0 0 0 0 0 8 3 0 0 955.61785 P0A6Z3 P0A6Z3 449 456 htpG Chaperone protein HtpG yes yes 3 0.0070316 58.782 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50046000 0 0 10494000 11090000 0 0 10988000 17474000 2860 88 3080 16838;16839;16840;16841 12742 12742 1 0 0 89164000 84081000 0 0 84565000 100280000 LLSFKPAAIRGNASE VAVGALDYRRHFCHELLSFKPAAIRGNASE LLSFKPAAIRGNASEIMALAGIANGGRGVD E L L S E I 3 1 1 0 0 0 1 1 0 1 2 1 0 1 1 2 0 0 0 0 0 0 15 2 0 4 1572.8624 P76423 P76423 116 130 thiM Hydroxyethylthiazole kinase yes yes 2;3 1.0406E-31 133.05 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 2342400000 137660000 121980000 534150000 482440000 115770000 151150000 403110000 396110000 2861 426 3081 16842;16843;16844;16845;16846;16847;16848;16849;16850;16851;16852;16853;16854;16855;16856;16857 12743;12744;12745;12746;12747;12748;12749;12750;12751;12752;12753 12750 11 2115200000 1860200000 4538600000 3657600000 1782300000 2290900000 3102400000 2273200000 LLSGLREA GEHTIRNYPATVHGALLSGLREAGRIADQF PATVHGALLSGLREAGRIADQFLGAMYTLP A L L E A G 1 1 0 0 0 0 1 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 8 1 1 0 857.49707 LSD1-FL-His LSD1-FL-His 817 824 yes yes 2 0.016555 64.567 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 1 72265000 3729400 3257400 0 2729200 37479000 16668000 3958700 4443600 2862 24 3082 16858;16859;16860;16861;16862;16863;16864;16865 12754 12754 1 33780000 19495000 0 20691000 53358000 23760000 30467000 25501000 LLSGLREAGRIA GEHTIRNYPATVHGALLSGLREAGRIADQF HGALLSGLREAGRIADQFLGAMYTLPRQAT A L L I A D 2 2 0 0 0 0 1 2 0 1 3 0 0 0 0 1 0 0 0 0 0 0 12 2 1 1 1254.7408 LSD1-FL-His LSD1-FL-His 817 828 yes yes 2;3 3.8632E-20 149.17 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2552500000 65467000 86941000 0 0 1632200000 767940000 0 0 2863 24 3083 16866;16867;16868;16869;16870;16871;16872;16873 12755;12756;12757;12758 12756 3 395190000 520340000 0 0 2323700000 1094700000 0 0 LLSHRPVR LAERRELAVEVGKAKLLSHRPVRDIDRERD VEVGKAKLLSHRPVRDIDRERDLLERLITL K L L V R D 0 2 0 0 0 0 0 0 1 0 2 0 0 0 1 1 0 0 0 1 0 0 8 1 0 1 976.59303 P0A9J8 P0A9J8 40 47 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.0068444 79.116 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70361000 20721000 24274000 0 0 13982000 11384000 0 0 2864 166 3084 16874;16875;16876;16877 12759;12760;12761;12762 12762 4 20721000 24847000 0 0 16867000 12611000 0 0 LLSNLVSEFR HQPMLYRLQQVSSRRLLSNLVSEFRRELPR VSSRRLLSNLVSEFRRELPREQAQEAGYGL R L L F R R 0 1 1 0 0 0 1 0 0 0 3 0 0 1 0 2 0 0 0 1 0 0 10 0 1 0 1176.6503 P17446 P17446 133 142 betI HTH-type transcriptional regulator BetI yes yes 2 0.00042617 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12810000 3921800 3097700 0 0 3276300 2513900 0 0 2865 289 3085 16878;16879;16880;16881 12763;12764;12765 12763 3 3921800 3170800 0 0 3952200 2784900 0 0 LLSPARDAAIARE ______________________________ LELLSPARDAAIAREAILHGADAVYIGGPG E L L R E A 4 2 0 1 0 0 1 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 13 2 0 5 1381.7678 P76104 P76104 10 22 ydcP Uncharacterized protease YdcP yes yes 3 0.0044789 41.644 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 25517000 3216600 2804400 0 0 1705900 1515900 7916700 8357500 2866 416 3086 16882;16883;16884;16885;16886;16887 12766;12767 12766 2 49422000 42768000 0 0 26263000 22976000 60929000 47963000 LLSQYDFPGDDTPIVRGSALKALE DDEELLELVEMEVRELLSQYDFPGDDTPIV DDTPIVRGSALKALEGDAEWEAKILELAGF E L L L E G 2 1 0 3 0 1 1 2 0 1 4 1 0 1 2 2 1 0 1 1 0 0 24 2 0 4 2604.3435 P0CE48;P0CE47 P0CE48 157 180 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3 5.7028E-05 45.784 By MS/MS By MS/MS 1 1 20946000 0 0 0 0 7576400 13370000 0 0 2867 269 3087 16888;16889 12768;12769 12768 2 0 0 0 0 116650000 202640000 0 0 LLTGDSPFAANALGK IINDDITGRVHKDRKLLTGDSPFAANALGK LLTGDSPFAANALGKLAAQEMLAAYAG___ K L L G K L 3 0 1 1 0 0 0 2 0 0 3 1 0 1 1 1 1 0 0 0 0 0 15 0 0 4 1473.7827 P31658 P31658 257 271 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 4.4996E-31 140.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 152850000 25261000 28023000 0 0 54017000 45545000 0 0 2868 335 3088 16890;16891;16892;16893 12770;12771;12772;12773 12770 4 25261000 28684000 0 0 65160000 50454000 0 0 LLTHSGPSILSPGNHYINR RKESRGLHFTLDYPELLTHSGPSILSPGNH SGPSILSPGNHYINR_______________ E L L N R - 0 1 2 0 0 0 0 2 2 2 3 0 0 0 2 3 1 0 1 0 0 0 19 0 0 2 2075.0912 P10902 P10902 522 540 nadB L-aspartate oxidase yes yes 3;4 9.1432E-05 49.463 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 1 65501000 8919500 9214500 11899000 16342000 11019000 8106900 0 0 2869 274 3089 16894;16895;16896;16897;16898;16899;16900;16901;16902 12774;12775;12776;12777;12778 12776 5 137050000 140520000 101100000 123900000 169650000 122870000 0 0 LLTLPANE FDHLATLTETIKTEELLTLPANEVLWRLYH ETIKTEELLTLPANEVLWRLYHEEEVTVYD E L L N E V 1 0 1 0 0 0 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 8 0 0 2 869.48583 P0A6Y5 P0A6Y5 200 207 hslO 33 kDa chaperonin yes yes 1 0.00027458 87.323 By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 31943000 6205700 5413100 2999300 3367500 4602800 2888300 2587700 3878200 2870 85 3090 16903;16904;16905;16906;16907;16908;16909;16910 12779 12779 0 95350000 82550000 25484000 25531000 70865000 43776000 19915000 22257000 LLTTMQQQGFVR ELAQQAGLPNSTTHRLLTTMQQQGFVRQVG THRLLTTMQQQGFVRQVGELGHWAIGAHAF R L L V R Q 0 1 0 0 0 3 0 1 0 0 2 0 1 1 0 0 2 0 0 1 0 0 12 0 0 0 1420.7497 P16528 P16528 63 74 iclR Acetate operon repressor yes yes 2 7.4827E-160 220.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 318480000 75379000 75908000 0 0 85389000 81805000 0 0 2871 285 3091;3092 16911;16912;16913;16914;16915;16916;16917;16918 12780;12781;12782;12783;12784;12785;12786;12787 12787 235 7 75379000 77699000 0 0 103000000 90621000 0 0 LMALHTGQSLE IHAREILKVKGRMNELMALHTGQSLEQIER RMNELMALHTGQSLEQIERDTERDRFLSAP E L M L E Q 1 0 0 0 0 1 1 1 1 0 3 0 1 0 0 1 1 0 0 0 0 0 11 0 0 1 1198.6016 P0A6G7 P0A6G7 166 176 clpP ATP-dependent Clp protease proteolytic subunit yes yes 2 1.5192E-05 78.334 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 2 2 2 2 2 2 115530000 6659800 2598400 25149000 28055000 7405400 9101300 9106200 27456000 2872 69 3093;3094 16919;16920;16921;16922;16923;16924;16925;16926;16927;16928;16929;16930;16931;16932;16933 12788;12789;12790;12791 12788 87 4 40901000 39625000 213690000 212700000 114010000 137940000 70083000 157560000 LMALKKNHKEE EKSDLEMQYETLQEELMALKKNHKEEMSQL LQEELMALKKNHKEEMSQLTGQNSGDVNVE E L M E E M 1 0 1 0 0 0 2 0 1 0 2 3 1 0 0 0 0 0 0 0 0 0 11 3 1 1 1339.7282 CON__P35527 CON__P35527 285 295 yes yes 3 0.0030174 45.433 By MS/MS By MS/MS By MS/MS 1 1 1 138510000 0 6904500 0 0 5441900 0 0 126170000 + 2873 15 3095 16934;16935;16936 12792;12793 12793 22 1 0 105290000 0 0 83783000 0 0 724060000 LMAPLLK SAPEEIRDLFSKRIKLMAPLLKAWKGALKA DLFSKRIKLMAPLLKAWKGALKAENAVDFS K L M L K A 1 0 0 0 0 0 0 0 0 0 3 1 1 0 1 0 0 0 0 0 0 0 7 0 0 2 784.48808 P15038 P15038 391 397 helD Helicase IV yes yes 2 0.002778 85.306 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 97508000 25841000 23630000 0 0 21429000 26607000 0 0 2874 281 3096;3097 16937;16938;16939;16940;16941;16942 12794;12795;12796;12797;12798;12799 12794 6 25841000 24188000 0 0 25850000 29475000 0 0 LMDLGCYR VEGDLRREISMSIKRLMDLGCYRGLRHRRG ISMSIKRLMDLGCYRGLRHRRGLPVRGQRT R L M Y R G 0 1 0 1 1 0 0 1 0 0 2 0 1 0 0 0 0 0 1 0 0 0 8 0 0 0 1026.4627 P0A7S9 P0A7S9 80 87 rpsM 30S ribosomal protein S13 yes yes 2 0.0018 74.415 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22498000 0 6107000 0 0 7949100 8442400 0 0 2875 123 3098 16943;16944;16945;16946 12800;12801;12802;12803 12800 4 0 6251200 0 0 9589000 9352200 0 0 LMDNMRNVALE EDPKEVIEFYSKNKELMDNMRNVALEEQAV KNKELMDNMRNVALEEQAVEAVLAKAKVTE E L M L E E 1 1 2 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 0 1 0 0 11 1 0 1 1304.6217 P0A850 P0A850 394 404 tig Trigger factor yes yes 2 4.219E-07 97.456 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 88821000 0 8190500 11344000 11663000 5827500 3271300 19904000 28620000 2876 137 3099;3100 16947;16948;16949;16950;16951;16952;16953;16954;16955;16956 12804;12805;12806;12807;12808;12809;12810;12811;12812 12804 128;129 9 0 124910000 96387000 88426000 89720000 49582000 153190000 164250000 LMEIAQQQHAQQQTAGADASANNAK AIEAKMQELAQVSQKLMEIAQQQHAQQQTA QQQTAGADASANNAKDDDVVDAEFEEVKDK K L M A K D 7 0 2 1 0 6 1 1 1 1 1 1 1 0 0 1 1 0 0 0 0 0 25 0 1 7 2623.2409 P0A6Y8 P0A6Y8 598 622 dnaK Chaperone protein DnaK yes yes 3 5.8084E-144 190.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 267220000 72045000 78440000 0 0 69741000 46992000 0 0 2877 86 3101;3102 16957;16958;16959;16960;16961;16962;16963;16964;16965 12813;12814;12815;12816;12817;12818;12819;12820 12819 94 8 72045000 80291000 0 0 84129000 52057000 0 0 LMEIAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVK AIEAKMQELAQVSQKLMEIAQQQHAQQQTA AKDDDVVDAEFEEVKDKK____________ K L M V K D 8 0 2 5 0 6 4 1 1 1 1 2 1 1 0 1 1 0 0 3 0 0 38 1 4 8 4113.8822 P0A6Y8 P0A6Y8 598 635 dnaK Chaperone protein DnaK yes yes 4 1.2063E-100 139.96 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 275530000 86849000 53539000 0 0 62535000 72603000 0 0 2878 86 3103;3104 16966;16967;16968;16969;16970;16971;16972;16973 12821;12822;12823;12824;12825 12823 94 5 86849000 54803000 0 0 75436000 80428000 0 0 LMEIAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDK AIEAKMQELAQVSQKLMEIAQQQHAQQQTA DDDVVDAEFEEVKDKK______________ K L M D K K 8 0 2 6 0 6 4 1 1 1 1 3 1 1 0 1 1 0 0 3 0 0 40 2 4 8 4357.0041 P0A6Y8 P0A6Y8 598 637 dnaK Chaperone protein DnaK yes yes 4;5 3.2053E-39 81.732 By matching By matching By MS/MS By MS/MS 1 1 2 2 130580000 9403300 6650600 0 0 42086000 72438000 0 0 2879 86 3105 16974;16975;16976;16977;16978;16979 12826;12827;12828;12829 12828 4 9403300 6807500 0 0 50769000 80245000 0 0 LMGFEAPGEAK QQHRPRRLTPRECARLMGFEAPGEAKFRIP ECARLMGFEAPGEAKFRIPVSDTQAYRQFG R L M A K F 2 0 0 0 0 0 2 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 11 0 2 3 1148.5536 P0AED9 P0AED9 410 420 dcm DNA-cytosine methyltransferase yes yes 2 1.3226E-05 103.7 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 247000000 56642000 49140000 0 0 70688000 70534000 0 0 2880 235 3106;3107 16980;16981;16982;16983;16984;16985;16986;16987 12830;12831;12832;12833;12834;12835;12836 12836 209 7 56642000 50300000 0 0 85272000 78136000 0 0 LMGFGHR PEFVRRAKDKNDSFRLMGFGHRVYKNYDPR KDKNDSFRLMGFGHRVYKNYDPRATVMRET R L M H R V 0 1 0 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 0 0 0 7 0 0 0 816.40648 P0ABH7 P0ABH7 301 307 gltA Citrate synthase yes yes 2 0.016826 49.669 By MS/MS By MS/MS By matching 1 1 1 17191000 8247600 0 0 0 4555000 4388300 0 0 2881 200 3108 16988;16989;16990 12837 12837 1 8247600 0 0 0 5494700 4861200 0 0 LMGITPTLHGGQAQAKLDE VSEDPTRVLTETIFELMGITPTLHGGQAQA TPTLHGGQAQAKLDEHQPVFMPVGAFCPPL E L M D E H 2 0 0 1 0 2 1 3 1 1 3 1 1 0 1 0 2 0 0 0 0 0 19 1 0 3 1979.0146 P30177 P30177 132 150 ybiB Uncharacterized protein YbiB yes yes 3 0.001719 32.181 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 1 2 1 2 2 74315000 3584400 6987100 12716000 7000400 9128500 6091000 14039000 14767000 2882 332 3109;3110 16991;16992;16993;16994;16995;16996;16997;16998;16999;17000;17001;17002;17003 12838;12839;12840;12841 12841 271 3 55073000 106550000 108050000 53074000 140540000 92319000 108050000 84747000 LMHDAIGHILQLRDNLKE SGHSSDPARGVNAIELMHDAIGHILQLRDN DAIGHILQLRDNLKERYHYEAFTVPYPTLN E L M K E R 1 1 1 2 0 1 1 1 2 2 4 1 1 0 0 0 0 0 0 0 0 0 18 2 0 1 2115.1259 P23908 P23908 208 225 argE Acetylornithine deacetylase yes yes 4 0.022856 13.904 By MS/MS By MS/MS 1 1 14058000 0 0 0 0 8433400 5624200 0 0 2883 308 3111 17004;17005 12842 12842 1 0 0 0 0 129840000 85243000 0 0 LMKNRNELLK L M L K 0 1 2 0 0 0 1 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 10 2 1 0 1257.7227 REV__P0ACR9 yes yes 3 0.0012904 63.216 By MS/MS By MS/MS By MS/MS 2 2 1 79711000 36995000 36836000 0 0 0 5879900 0 0 + 2884 445 3112 17006;17007;17008;17009;17010 12843;12844 12843 2 36995000 37706000 0 0 0 6513600 0 0 LMPQSRAKLDANLKDFE IARATAVAIHGKLVELMPQSRAKLDANLKD PQSRAKLDANLKDFEAQLASTETQVGNELA E L M F E A 2 1 1 2 0 1 1 0 0 0 3 2 1 1 1 1 0 0 0 0 0 0 17 3 0 3 1975.0197 P39172 P39172 165 181 znuA High-affinity zinc uptake system protein ZnuA yes yes 3;4 1.0462E-07 73.983 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 4 3 4 4 4 4 640710000 57401000 32504000 92018000 64789000 75334000 80391000 94088000 144190000 2885 361 3113;3114 17011;17012;17013;17014;17015;17016;17017;17018;17019;17020;17021;17022;17023;17024;17025;17026;17027;17028;17029;17030;17031;17032;17033;17034;17035;17036;17037;17038 12845;12846;12847;12848;12849;12850;12851;12852;12853;12854;12855 12852 292 11 881950000 495680000 781870000 491200000 1159800000 1218500000 724120000 827460000 LMRRYASILK L M L K 1 2 0 0 0 0 0 0 0 1 2 1 1 0 0 1 0 0 1 0 0 0 10 2 0 1 1249.7329 REV__P76483 yes yes 3 0.0066506 33.961 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 2886 449 3115 17039 12856 12856 342 1 0 0 0 0 0 0 0 0 LMTEFNYNSVMQVPR MAKLHDYYKDEVVKKLMTEFNYNSVMQVPR LMTEFNYNSVMQVPRVEKITLNMGVGEAIA K L M P R V 0 1 2 0 0 1 1 0 0 0 1 0 2 1 1 1 1 0 1 2 0 0 15 0 1 1 1827.8648 P62399 P62399 16 30 rplE 50S ribosomal protein L5 yes yes 2 2.3207E-14 135.66 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 96675000 32966000 28381000 0 0 8763500 26565000 0 0 2887 388 3116 17040;17041;17042;17043 12857 12857 1 32966000 29051000 0 0 10571000 29428000 0 0 LMTGYVVDR AGNEHQQRNPASLTKLMTGYVVDRAIDSHR PASLTKLMTGYVVDRAIDSHRITPDDIVTV K L M D R A 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 1 2 0 0 9 0 0 0 1052.5325 P33013 P33013 67 75 dacD D-alanyl-D-alanine carboxypeptidase DacD yes yes 2 0.0029575 47.574 By MS/MS 1 0 0 0 0 0 0 0 0 0 2888 341 3117 17044 12858 12858 1 0 0 0 0 0 0 0 0 LMYVALTR LLPPVEDFPDAEERRLMYVALTRARHRVWA PDAEERRLMYVALTRARHRVWALFNKENPS R L M T R A 1 1 0 0 0 0 0 0 0 0 2 0 1 0 0 0 1 0 1 1 0 0 8 0 0 1 965.53682 P15038 P15038 645 652 helD Helicase IV yes yes 2 0.0015523 92.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44419000 13624000 11951000 0 0 8357900 10486000 0 0 2889 281 3118 17045;17046;17047;17048 12859;12860;12861;12862 12860 4 13624000 12233000 0 0 10082000 11616000 0 0 LNDHKPASIGQASR DYRQVSGLSNEVIAKLNDHKPASIGQASRI KLNDHKPASIGQASRISGVTPAAISILLVW K L N S R I 2 1 1 1 0 1 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 14 1 0 3 1492.7746 P0A6U3 P0A6U3 590 603 mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG yes yes 3 0.0038467 41.967 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13245000 3115500 4666800 0 0 2912500 2549900 0 0 2890 82 3119 17049;17050;17051;17052 12863;12864;12865 12864 3 3115500 4776900 0 0 3513300 2824700 0 0 LNDLEDALQQAK AEQRGENALKDAKNKLNDLEDALQQAKEDL KNKLNDLEDALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 2 0 2 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 1 2 1356.6885 CON__P04264 CON__P04264 444 455 yes yes 2 0 297.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 687420000 88644000 121430000 0 0 241610000 235730000 0 0 + 2891 9 3120 17053;17054;17055;17056 12866;12867;12868;12869;12870 12867 5 88644000 124290000 0 0 291460000 261140000 0 0 LNDLEDALQQAKEDLAR AEQRGENALKDAKNKLNDLEDALQQAKEDL DLEDALQQAKEDLARLLRDYQELMNTKLAL K L N A R L 3 1 1 3 0 2 2 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 17 1 2 3 1940.9803 CON__P04264 CON__P04264 444 460 yes yes 2;3 2.621E-70 122.57 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 + 2892 9 3121 17057;17058 12871;12872 12871 2 0 0 0 0 0 0 0 0 LNDLEEALQQAK AEQRGEHALKDARNKLNDLEEALQQAKEDL RNKLNDLEEALQQAKEDLARLLRDYQELMN K L N A K E 2 0 1 1 0 2 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 12 0 2 2 1370.7042 CON__P35908v2;CON__P35908 CON__P35908v2 442 453 yes no 2 8.215E-264 261.16 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 169000000 25188000 21817000 0 0 52716000 69279000 0 0 + 2893 16 3122 17059;17060;17061;17062;17063 12873;12874;12875;12876 12875 4 38772000 22332000 0 0 63592000 76746000 0 0 LNEKEMLIAKSTTIR SLTEAAEVAERIRLKLNEKEMLIAKSTTIR LNEKEMLIAKSTTIRISASLGVSSSEETGD K L N I R I 1 1 1 0 0 0 2 0 0 2 2 2 1 0 0 1 2 0 0 0 0 0 15 2 2 1 1745.971 P76330 P76330 504 518 yedQ Probable diguanylate cyclase YedQ yes yes 3 0.0056342 31.389 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2894 423 3123 17064;17065 12877 12877 33;68;69 0 0 0 0 0 0 0 0 0 LNELLEFPTPFTYK ______________________________ KLNELLEFPTPFTYKVMGQALPELVDQVVE K L N Y K V 0 0 1 0 0 0 2 0 0 0 3 1 0 2 2 0 2 0 1 0 0 0 14 0 2 2 1710.8869 P0A8J4 P0A8J4 5 18 ybeD UPF0250 protein YbeD yes yes 2 5.4912E-18 99.522 By MS/MS By MS/MS By MS/MS 1 1 1 18297000 11948000 3223700 0 0 0 3125800 0 0 2895 145 3124 17066;17067;17068 12878 12878 0 11948000 3299800 0 0 0 3462600 0 0 LNGIDESSVK GDSYISELATRENLRLNGIDESSVKFLDST RENLRLNGIDESSVKFLDSTADYPQQPGVV R L N V K F 0 0 1 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 10 0 1 0 1060.5401 P42596 P42596 86 95 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 4.6808E-11 124.92 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 125160000 33872000 41896000 1311100 1049400 22539000 22888000 0 1609300 2896 366 3125 17069;17070;17071;17072;17073;17074;17075 12879;12880;12881;12882 12880 4 33872000 42885000 11140000 7955700 27189000 25355000 0 9235200 LNGLLNDALAPVSE LHMDIRPLPGMTLNELNGLLNDALAPVSER ELNGLLNDALAPVSERWPGRLTVDELHPPI E L N S E R 2 0 2 1 0 0 1 1 0 0 4 0 0 0 1 1 0 0 0 1 0 0 14 0 0 3 1424.7511 P23908 P23908 274 287 argE Acetylornithine deacetylase yes yes 2 1.2299E-16 135.55 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 106740000 7270400 10202000 8686100 8675200 27125000 27812000 4503300 12471000 2897 308 3126 17076;17077;17078;17079;17080;17081;17082;17083 12883;12884;12885;12886 12885 4 111710000 155570000 73804000 65772000 417610000 421530000 34659000 71570000 LNHLVDDK QFERPVTVGYMYMLKLNHLVDDKMHARSTG GYMYMLKLNHLVDDKMHARSTGSYSLVTQQ K L N D K M 0 0 1 2 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 0 0 952.49779 P0A8V2 P0A8V2 1235 1242 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0042944 64.265 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 14884000 3276400 4009800 0 0 3640300 2359600 0 1598000 2898 154 3127 17084;17085;17086;17087;17088 12887;12888;12889 12887 3 3276400 4104500 0 0 4391300 2613900 0 9170400 LNHSATHLMHAALR AVQADVDEARRARIRLNHSATHLMHAALRQ RLNHSATHLMHAALRQVLGTHVSQKGSLVN R L N L R Q 3 1 1 0 0 0 0 0 3 0 3 0 1 0 0 1 1 0 0 0 0 0 14 0 0 3 1570.8151 P00957 P00957 562 575 alaS Alanine--tRNA ligase yes yes 4 0.0027168 39.006 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 16637000 4179400 6519600 0 0 3983900 1953900 0 0 2899 33 3128 17089;17090;17091;17092 12890;12891 12891 2 4179400 6673500 0 0 4805800 2164500 0 0 LNIKPGQTTFDGR HINGYQGIQAALEKKLNIKPGQTTFDGRFT KKLNIKPGQTTFDGRFTLLPTCCLGNCDKG K L N G R F 0 1 1 1 0 1 0 2 0 1 1 1 0 1 1 0 2 0 0 0 0 0 13 1 0 1 1445.7627 P0AFD1 P0AFD1 113 125 nuoE NADH-quinone oxidoreductase subunit E yes yes 3 0.0068255 38.161 By MS/MS By MS/MS By MS/MS 1 1 1 32945000 0 12618000 0 0 9946700 10381000 0 0 2900 244 3129 17093;17094;17095 12892 12892 1 0 12916000 0 0 11999000 11499000 0 0 LNNELQQEVHQRLTEA RVEDLFIIATADRRALNNELQQEVHQRLTE NNELQQEVHQRLTEALNPNDKG________ A L N E A L 1 1 2 0 0 3 3 0 1 0 3 0 0 0 0 0 1 0 0 1 0 0 16 1 3 0 1920.9654 P27249 P27249 868 883 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.003009 35.659 By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 18987000 0 0 1918200 0 1551800 6839500 2134500 6543500 2901 320 3130 17096;17097;17098;17099;17100 12893 12893 1 0 0 16298000 0 2209300 9749700 16428000 37552000 LNPADAAK RAPVFQSRMPQPYIKLNPADAAKLGVNAGT MPQPYIKLNPADAAKLGVNAGTRVSFSYDG K L N A K L 3 0 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 8 0 0 4 798.42357 P33602 P33602 842 849 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.00058337 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 193800000 48012000 71742000 0 0 39225000 34817000 0 0 2902 345 3131 17101;17102;17103;17104 12894;12895;12896;12897 12894 4 48012000 73435000 0 0 47318000 38570000 0 0 LNPDHVLVKRAADTEDE AAAGQKVPEVKYIFELNPDHVLVKRAADTE PDHVLVKRAADTEDEAKFSEWVELLLDQAL E L N D E A 2 1 1 3 0 0 2 0 1 0 2 1 0 0 1 0 1 0 0 2 0 0 17 2 1 3 1920.9541 P0A6Z3 P0A6Z3 570 586 htpG Chaperone protein HtpG yes yes 3 1.3912E-33 97.579 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 408820000 0 0 91866000 66563000 17524000 11952000 83867000 137050000 2903 88 3132 17105;17106;17107;17108;17109;17110;17111;17112 12898;12899;12900;12901;12902 12898 5 0 0 780570000 504650000 269800000 181150000 645460000 786520000 LNRVIQRLQGE RHGDSLKEIKIEISELNRVIQRLQGEIAHV EISELNRVIQRLQGEIAHVKKQCKNVQDAI E L N G E I 0 2 1 0 0 2 1 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 2 0 0 1324.7575 CON__P35908v2;CON__P35908 CON__P35908v2 399 409 yes no 3 0.0058018 47.559 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 26002000 3479600 3309800 0 4220200 1100500 775570 0 13116000 + 2904 16 3133 17113;17114;17115;17116;17117;17118 12903 12903 1 53463000 50475000 0 31996000 16943000 11755000 0 75273000 LNSLEDVRK TAPGSLKAPDTRNEKLNSLEDVRKGSENYA DTRNEKLNSLEDVRKGSENYALTTNQGVRI K L N R K G 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 9 1 1 0 1072.5877 P21179 P21179 65 73 katE Catalase HPII yes yes 2;3 0.00066158 93.143 By MS/MS By MS/MS By matching By matching 2 2 1 1 44341000 20287000 20536000 0 0 2227800 1290600 0 0 2905 293 3134 17119;17120;17121;17122;17123;17124 12904;12905;12906;12907;12908 12905 4 20287000 21020000 0 0 2687400 1429700 0 0 LNSQPACTAR GSQLAQTLGLVQGSRLNSQPACTARRRTRV VQGSRLNSQPACTARRRTRVLILGVNGFIG R L N A R R 2 1 1 0 1 1 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 10 0 0 3 1116.5346 P77398 P77398 304 313 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 1.6652E-174 233.46 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 3965600000 1467100000 962730000 0 0 845040000 690740000 0 0 2906 432 3135 17125;17126;17127;17128;17129;17130;17131 12909;12910;12911;12912;12913;12914 12911 6 1473500000 985450000 0 0 1019400000 765190000 0 0 LNTAVRQVR YSCVPVALAEGLDIKLNTAVRQVRYTASGC EGLDIKLNTAVRQVRYTASGCEVIAVNTRS K L N V R Y 1 2 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 9 1 0 1 1055.62 LSD1-FL-His LSD1-FL-His 588 596 yes yes 3 0.0015116 57.859 By MS/MS By MS/MS By matching 1 1 1 12251000 0 10953000 0 0 0 1297800 0 0 2907 24 3136 17132;17133;17134 12915;12916 12915 2 0 11211000 0 0 0 1437700 0 0 LNTEVGR TRRREIFTGMGIEFKLNTEVGRDVQLDDLL TGMGIEFKLNTEVGRDVQLDDLLSDYDAVF K L N G R D 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 1 0 787.41882 P09832 P09832 215 221 gltD Glutamate synthase [NADPH] small chain yes yes 2 0.0057863 70.912 By MS/MS 1 0 0 0 0 0 0 0 0 0 2908 65 3137 17135 12917 12917 1 0 0 0 0 0 0 0 0 LNTINHR MLNGVKQRHDWFVERLNTINHRYGLFSEVR RHDWFVERLNTINHRYGLFSEVRGLGLLIG R L N H R Y 0 1 2 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 0 0 866.47225 P77581 P77581 319 325 astC Succinylornithine transaminase yes yes 2 2.6214E-60 155.73 By MS/MS By MS/MS By MS/MS 1 1 1 66600000 34168000 24954000 0 0 0 7478400 0 0 2909 437 3138 17136;17137;17138 12918;12919;12920 12918 1 34168000 25542000 0 0 0 8284400 0 0 LNTLSPAEGSK ______________________________ ______________________________ R L N S K K 1 0 1 0 0 0 1 1 0 0 2 1 0 0 1 2 1 0 0 0 0 0 11 0 1 2 1115.5823 P02413 P02413 3 13 rplO 50S ribosomal protein L15 yes yes 2 1.7834E-64 175.73 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 6286300000 1324700000 1815100000 0 0 1542100000 1604500000 0 0 2910 37 3139 17139;17140;17141;17142;17143;17144;17145 12921;12922;12923;12924;12925;12926;12927 12921 6 1324700000 1857900000 0 0 1860300000 1777400000 0 0 LNVELDP GGIHQVTINKSLLAPLNVELDPEIQKVRAQ INKSLLAPLNVELDPEIQKVRAQEREQIKV P L N D P E 0 0 1 1 0 0 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 7 0 1 0 798.41233 CON__Q32MB2;CON__Q7RTS7;CON__Q3SY84 CON__Q32MB2 117 123 no no 1 0.012431 81.381 By MS/MS 1 4339700 0 0 0 0 0 4339700 0 0 + 2911 18 3140 17146 12928 12928 0 0 0 0 0 0 6186300 0 0 LNVETNMPEALDR VVFVDESPMAVASSRLNVETNMPEALDRCE SRLNVETNMPEALDRCEFMINNALSGVEPF R L N D R C 1 1 2 1 0 0 2 0 0 0 2 0 1 0 1 0 1 0 0 1 0 0 13 0 2 2 1500.7242 P42596 P42596 270 282 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 1.5356E-119 240.8 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 429250000 103160000 127100000 0 0 78166000 120820000 0 0 2912 366 3141;3142 17147;17148;17149;17150;17151;17152;17153;17154 12929;12930;12931;12932;12933;12934;12935;12936 12933 295 8 103160000 130100000 0 0 94292000 133850000 0 0 LNVLVNVLGK SGTREVVLGMAHRGRLNVLVNVLGKKPQDL AHRGRLNVLVNVLGKKPQDLFDEFAGKHKE R L N G K K 0 0 2 0 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 3 0 0 10 0 0 0 1067.6703 P0AFG3 P0AFG3 264 273 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.00034691 110.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46379000 10453000 13360000 0 0 12364000 10202000 0 0 2913 246 3143 17155;17156;17157;17158 12937;12938;12939;12940 12937 4 10453000 13675000 0 0 14914000 11302000 0 0 LNVSEEEVTTGLDRFA MVLIAGGNVVRFAPALNVSEEEVTTGLDRF NVSEEEVTTGLDRFAAACEHFVSRGSS___ A L N F A A 1 1 1 1 0 0 3 1 0 0 2 0 0 1 0 1 2 0 0 2 0 0 16 1 3 0 1778.8687 P77581 P77581 379 394 astC Succinylornithine transaminase yes yes 2 0.0063681 45.257 By MS/MS By MS/MS 1 1 1758700 0 0 0 0 0 1758700 0 0 2914 437 3144 17159;17160 12941;12942 12942 2 0 0 0 0 0 2507100 0 0 LNVSVQK ALRVSGQTWGLFFERLNVSVQKLENAIEFY TWGLFFERLNVSVQKLENAIEFYGAISHNK R L N Q K L 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 7 0 0 0 786.45995 P00936 P00936 693 699 cyaA Adenylate cyclase yes yes 2 0.0024252 86.866 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 58085000 9455200 8936600 0 0 34417000 5275800 0 0 2915 31 3145 17161;17162;17163;17164;17165;17166;17167;17168;17169;17170;17171 12943;12944;12945 12943 3 56151000 50147000 0 0 67776000 30119000 0 0 LNVYLRTARE NQTRTIRLPIHIVKELNVYLRTARELSHKL HIVKELNVYLRTARELSHKLDHEPSAEEIA E L N R E L 1 2 1 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 10 2 0 1 1233.683 P13445 P13445 175 184 rpoS RNA polymerase sigma factor RpoS yes yes 3 0.0073056 42.743 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 35863000 0 4968000 3407600 4441200 1285800 5944400 5776500 10039000 2916 279 3146 17172;17173;17174;17175;17176;17177;17178 12946;12947 12946 1 0 75763000 28954000 33671000 19796000 90097000 44457000 57612000 LNYALLMRNFSGE GDGYTVWLPVPQDLELNYALLMRNFSGETT LELNYALLMRNFSGETTRNPHGK_______ E L N G E T 1 1 2 0 0 0 1 1 0 0 3 0 1 1 0 1 0 0 1 0 0 0 13 1 0 1 1526.7551 P76403 P76403 433 445 yegQ Uncharacterized protease YegQ yes yes 2 1.6489E-05 81.865 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 13152000 3548200 2952700 0 0 0 0 3090400 3560900 2917 424 3147;3148 17179;17180;17181;17182 12948;12949;12950 12948 323 3 54518000 45029000 0 0 0 0 23784000 20436000 LNYSGEGNEPVER DNRLLFDRQLSVAQRLNYSGEGNEPVERMM QRLNYSGEGNEPVERMMKDYFRVTRRVSEL R L N E R M 0 1 2 0 0 0 3 2 0 0 1 0 0 0 1 1 0 0 1 1 0 0 13 0 3 1 1462.6688 P27249 P27249 299 311 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 2.4214E-160 219.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 161600000 44677000 45794000 0 0 33763000 37370000 0 0 2918 320 3149 17183;17184;17185;17186 12951;12952;12953;12954 12954 4 44677000 46875000 0 0 40729000 41398000 0 0 LPAPTPK LQEMVADVSHHFPLRLPAPTPKALYSPCEI VSHHFPLRLPAPTPKALYSPCEIRHLAIIV R L P P K A 1 0 0 0 0 0 0 0 0 0 1 1 0 0 3 0 1 0 0 0 0 0 7 0 0 4 722.43268 P00936 P00936 535 541 cyaA Adenylate cyclase yes yes 2 0.023285 44.692 By MS/MS By MS/MS 1 1 9308300 0 0 0 0 4476400 4831900 0 0 2919 31 3150 17187;17188 12955;12956 12955 2 0 0 0 0 5399900 5352700 0 0 LPATDGQVK SVLNLVSTDGRFKARLPATDGQVKFPAWSP GRFKARLPATDGQVKFPAWSPYL_______ R L P V K F 1 0 0 1 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 9 0 0 2 927.50255 P0A855 P0A855 414 422 tolB Protein TolB yes yes 2 0.0033345 63.565 By matching By MS/MS 1 1 8965300 0 0 0 0 4480700 4484600 0 0 2920 138 3151 17189;17190 12957 12957 1 0 0 0 0 5405100 4968000 0 0 LPDDQAQK HPLSDVDLLILSRKKLPDDQAQKVGELLTL LILSRKKLPDDQAQKVGELLTLLWDVKLEV K L P Q K V 1 0 0 2 0 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 8 0 0 2 913.45051 P27249 P27249 116 123 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.016764 48.561 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37817000 13609000 9803700 0 0 9837400 4566900 0 0 2921 320 3152 17191;17192;17193;17194 12958 12958 1 13609000 10035000 0 0 11867000 5059100 0 0 LPEHETTWAMTVHK FAMPDGNIKSVQPSRLPEHETTWAMTVHKS RLPEHETTWAMTVHKSQGSEFDHAALILPS R L P H K S 1 0 0 0 0 0 2 0 2 0 1 1 1 0 1 0 3 1 0 1 0 0 14 0 2 2 1678.8137 P04993 P04993 527 540 recD RecBCD enzyme subunit RecD yes yes 3 0.00078398 55.213 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44038000 11094000 9501700 0 0 11456000 11986000 0 0 2922 46 3153 17195;17196;17197;17198 12959;12960;12961;12962 12959 4 11094000 9726000 0 0 13820000 13278000 0 0 LPEWKTSA GVLKQQPPAVQFVPPLPEWKTSAVQRMGFG AVQFVPPLPEWKTSAVQRMGFGNLNKVVLC P L P S A V 1 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 1 1 0 0 0 0 8 1 1 1 930.48108 LSD1-FL-His LSD1-FL-His 645 652 yes yes 2 0.0078304 69.998 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 141330000 6871100 6279900 1430400 0 77160000 49586000 0 0 2923 24 3154 17199;17200;17201;17202;17203 12963 12963 1 41477000 37585000 12154000 0 109850000 70685000 0 0 LPFSDTSMDAIIR KRYPQVTFCVASSHRLPFSDTSMDAIIRIY HRLPFSDTSMDAIIRIYAPCKAEELARVVK R L P I R I 1 1 0 2 0 0 0 0 0 2 1 0 1 1 1 2 1 0 0 0 0 0 13 0 0 2 1464.7283 P36999 P36999 142 154 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 7.2313E-08 118.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 515960000 99106000 150430000 0 0 105460000 160960000 0 0 2924 352 3155;3156 17204;17205;17206;17207;17208;17209 12964;12965;12966;12967;12968;12969 12966 290 5 99106000 153980000 0 0 127220000 178300000 0 0 LPGEVAFFIAK RVAILMKKADENDIRLPGEVAFFIAKRLRS NDIRLPGEVAFFIAKRLRSNVRELEGALNR R L P A K R 2 0 0 0 0 0 1 1 0 1 1 1 0 2 1 0 0 0 0 1 0 0 11 0 1 3 1190.6699 P03004 P03004 317 327 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.0027984 60.019 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 25704000 7857500 5728700 0 0 5318200 6800000 0 0 2925 40 3157 17210;17211;17212;17213 12970;12971 12971 2 7857500 5863900 0 0 6415400 7532900 0 0 LPGILELSR KLKLDHLGKEVLESRLPGILELSRTFAHVD EVLESRLPGILELSRTFAHVDPVKEPIPVI R L P S R T 0 1 0 0 0 0 1 1 0 1 3 0 0 0 1 1 0 0 0 0 0 0 9 0 1 1 996.59678 P0AC41 P0AC41 327 335 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 3.3642E-05 106.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 347710000 86345000 78759000 0 0 88767000 93839000 0 0 2926 203 3158 17214;17215;17216;17217 12972;12973;12974;12975 12972 4 86345000 80618000 0 0 107080000 103950000 0 0 LPHVPEGHK STTLFKDFTFEAAHRLPHVPEGHKCGRLHG FEAAHRLPHVPEGHKCGRLHGHSFMVRLEI R L P H K C 0 0 0 0 0 0 1 1 2 0 1 1 0 0 2 0 0 0 0 1 0 0 9 0 1 2 1012.5454 P65870 P65870 18 26 queD 6-carboxy-5,6,7,8-tetrahydropterin synthase yes yes 2 0.004882 39.022 By MS/MS 1 0 0 0 0 0 0 0 0 0 2927 399 3159 17218 12976 12976 1 0 0 0 0 0 0 0 0 LPIDLSQLK RGIIYHVDATQSVGKLPIDLSQLKVDLMSF TQSVGKLPIDLSQLKVDLMSFSGHKIYGPK K L P L K V 0 0 0 1 0 1 0 0 0 1 3 1 0 0 1 1 0 0 0 0 0 0 9 0 0 1 1025.6121 P0A6B7 P0A6B7 188 196 iscS Cysteine desulfurase IscS yes yes 2 0.0019504 53.493 By MS/MS By MS/MS By MS/MS 1 1 1 11520000 0 7236200 0 0 0 4283900 0 0 2928 67 3160 17219;17220;17221 12977;12978 12977 2 0 7407000 0 0 0 4745600 0 0 LPIHIVK QTIERAIMNQTRTIRLPIHIVKELNVYLRT MNQTRTIRLPIHIVKELNVYLRTARELSHK R L P V K E 0 0 0 0 0 0 0 0 1 2 1 1 0 0 1 0 0 0 0 1 0 0 7 0 0 1 818.53781 P13445 P13445 167 173 rpoS RNA polymerase sigma factor RpoS yes yes 2 0.0024677 94.669 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33213000 9337000 8426100 0 0 8049300 7400300 0 0 2929 279 3161 17222;17223;17224;17225 12979;12980;12981;12982 12979 4 9337000 8625000 0 0 9709900 8197900 0 0 LPLDSATTE EDSHLGDFIEDTTLELPLDSATTESLRAAT EDTTLELPLDSATTESLRAATHDVLAGLTA E L P T E S 1 0 0 1 0 0 1 0 0 0 2 0 0 0 1 1 2 0 0 0 0 0 9 0 0 2 945.46549 P00579 P00579 530 538 rpoD RNA polymerase sigma factor RpoD yes yes 1 0.017537 41.652 By MS/MS By MS/MS 1 1 21511000 10747000 10763000 0 0 0 0 0 0 2930 27 3162 17226;17227 12983 12983 1 165130000 164140000 0 0 0 0 0 0 LPMHASGAGK QCTHLMRMSAPIGGKLPMHASGAGKAFLAQ PIGGKLPMHASGAGKAFLAQLSEEQVTKLL K L P G K A 2 0 0 0 0 0 0 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 10 0 0 3 967.49094 P16528 P16528 154 163 iclR Acetate operon repressor yes yes 2 0.0037698 57.859 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 77005000 27312000 24074000 0 0 13706000 11913000 0 0 2931 285 3163 17228;17229;17230;17231 12984;12985;12986 12984 3 27312000 24642000 0 0 16534000 13197000 0 0 LPNTLSFR LCHALGPAPPPDPQRLPNTLSFRCSLADFQ PPPDPQRLPNTLSFRCSLADFQIEKKIGRG R L P F R C 0 1 1 0 0 0 0 0 0 0 2 0 0 1 1 1 1 0 0 0 0 0 8 0 0 1 946.52362 GST-Nek6 GST-Nek6 263 270 yes yes 2 1.4611E-07 123.5 By matching By matching By MS/MS By MS/MS 1 1 4 4 71988000 8123600 5648100 0 0 38894000 19322000 0 0 2932 23 3164;3165 17232;17233;17234;17235;17236;17237;17238;17239;17240;17241 12987;12988;12989;12990;12991;12992 12990 6;40 2 8123600 5781400 0 0 46919000 21404000 0 0 LPPFIEIYR ______________________________ ______________________________ K L P Y R A 0 1 0 0 0 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 0 0 9 0 1 2 1146.6437 P23908 P23908 5 13 argE Acetylornithine deacetylase yes yes 2 4.4509E-27 148.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 553450000 168660000 129050000 0 0 98083000 157650000 0 0 2933 308 3166 17242;17243;17244;17245 12993;12994;12995;12996;12997 12994 5 168660000 132100000 0 0 118320000 174640000 0 0 LPPPPPQAPPEEENESEPEEPSGVEGAAFQSR YSEEERNAKAEKEKKLPPPPPQAPPEEENE PEEPSGVEGAAFQSRLPHDRMTSQEAACFP K L P S R L 3 1 1 0 0 2 8 2 0 0 1 0 0 1 9 3 0 0 0 1 0 0 32 0 8 12 3397.5586 LSD1-FL-His LSD1-FL-His 153 184 yes yes 3;4 6.1727E-53 110.29 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 13608000000 3260900000 2771500000 0 0 3311900000 4263300000 0 0 2934 24 3167 17246;17247;17248;17249;17250;17251;17252;17253;17254;17255;17256 12998;12999;13000;13001;13002;13003;13004;13005;13006;13007;13008;13009;13010;13011;13012;13013;13014;13015;13016;13017;13018;13019;13020;13021;13022;13023;13024 13012 27 3295200000 2836900000 0 0 3995100000 4722700000 0 0 LPQRLPK KFREDDPSAHLASPKLPQRLPKDLSEAQVE SAHLASPKLPQRLPKDLSEAQVERLLQAPL K L P P K D 0 1 0 0 0 1 0 0 0 0 2 1 0 0 2 0 0 0 0 0 0 0 7 1 0 2 850.53887 P0A8P8 P0A8P8 105 111 xerD Tyrosine recombinase XerD yes yes 2 0.0098743 69.432 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14651000 4674700 6142300 0 0 1644300 2189800 0 0 2935 151 3168 17257;17258;17259;17260 13025 13025 1 4674700 6287300 0 0 1983500 2425800 0 0 LPQTMQTAR DKRYALDHFQTKLLKLPQTMQTARGKQLAQ QTKLLKLPQTMQTARGKQLAQHNAHFLVEF K L P A R G 1 1 0 0 0 2 0 0 0 0 1 0 1 0 1 0 2 0 0 0 0 0 9 0 0 2 1044.5386 P46144 P46144 181 189 yedJ Uncharacterized protein YedJ yes yes 2 1.079E-06 113.71 By MS/MS By MS/MS By matching By matching 1 1 1 1 67547000 19761000 26063000 0 0 10181000 11542000 0 0 2936 371 3169 17261;17262;17263;17264 13026;13027 13026 2 19761000 26679000 0 0 12282000 12785000 0 0 LPSQCHQEAR FARGILTEGHLISVRLPSQCHQEARNIPPH LISVRLPSQCHQEARNIPPHRQSRFLASRG R L P A R N 1 1 0 0 1 2 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1 2 1224.567 P0ADM8 P0ADM8 20 29 yieE Uncharacterized protein YieE yes yes 3 0.0040657 39.917 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9061500 3218600 2971500 0 0 1652000 1219500 0 0 2937 223 3170 17265;17266;17267;17268 13028 13028 1 3218600 3041600 0 0 1992800 1350900 0 0 LPVTILSR PEHVKFLLATTDPQKLPVTILSRCLQFHLK ATTDPQKLPVTILSRCLQFHLKALDVEQIR K L P S R C 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 8 0 0 1 897.56475 P06710 P06710 162 169 dnaX DNA polymerase III subunit tau yes yes 2 0.0027726 75.692 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 45576000 13285000 11370000 0 0 11650000 9271000 0 0 2938 51 3171 17269;17270;17271;17272;17273;17274;17275;17276 13029;13030;13031;13032 13029 4 25839000 22327000 0 0 41634000 36977000 0 0 LPYVWPESVSMR VVVDLPKDILNPANKLPYVWPESVSMRSYN ANKLPYVWPESVSMRSYNPTTTGHKGQIKR K L P M R S 0 1 0 0 0 0 1 0 0 0 1 0 1 0 2 2 0 1 1 2 0 0 12 0 1 2 1462.7279 P00893 P00893 172 183 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 6.862E-19 128.27 By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 34300000 4707800 25235000 0 590630 0 3767000 0 0 2939 29 3172;3173 17277;17278;17279;17280;17281 13033;13034 13034 2 4707800 25830000 0 4477900 0 4172900 0 0 LQALLGR ENNHLKEQQNGWQERLQALLGRMEEV____ QQNGWQERLQALLGRMEEV___________ R L Q G R M 1 1 0 0 0 1 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 769.48102 P0AF36 P0AF36 71 77 zapB Cell division protein ZapB yes yes 2 3.3692E-17 140.01 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 2 96833000 29151000 26098000 2318300 0 17010000 22255000 0 0 2940 242 3174 17282;17283;17284;17285;17286;17287;17288;17289;17290 13035;13036;13037;13038 13036 4 41940000 39977000 19698000 0 21862000 25592000 0 0 LQDIPPSQIR AMERGWQCLRLFAERLQDIPPSQIRVVATA LFAERLQDIPPSQIRVVATATLRLAVNAGD R L Q I R V 0 1 0 1 0 2 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 0 10 0 0 2 1165.6455 P25552 P25552 71 80 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 4.2939E-06 79.906 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 19713000 6261000 5979800 0 0 7472300 0 0 0 2941 316 3175 17291;17292;17293;17294;17295 13039;13040;13041;13042;13043;13044;13045 13045 7 6261000 6120900 0 0 9013900 0 0 0 LQEGQNIALVSDAGTPLINDPGYHLVR HDHNEQQKAETLLAKLQEGQNIALVSDAGT AGTPLINDPGYHLVRTCREAGIRVVPLPGP K L Q V R T 2 1 2 2 0 2 1 3 1 2 4 0 0 0 2 1 1 0 1 2 0 0 27 0 1 4 2889.4985 P67087 P67087 81 107 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 3 8.0721E-26 94.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42130000 11692000 8753900 0 0 9497900 12186000 0 0 2942 400 3176 17296;17297;17298;17299 13046;13047;13048 13047 3 11692000 8960500 0 0 11457000 13500000 0 0 LQELEANPPSDVYLSSR EYDELAETQGKLEEKLQELEANPPSDVYLS ELEANPPSDVYLSSRDRQILDWHFANLEFA K L Q S R D 1 1 1 1 0 1 2 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 17 0 2 3 1916.948 LSD1-FL-His LSD1-FL-His 510 526 yes yes 2;3 2.4734E-199 227.63 By MS/MS By MS/MS By MS/MS By MS/MS 7 6 3 5 50128000000 12497000000 14390000000 0 0 11788000000 11453000000 0 0 2943 24 3177 17300;17301;17302;17303;17304;17305;17306;17307;17308;17309;17310;17311;17312;17313;17314;17315;17316;17317;17318;17319;17320 13049;13050;13051;13052;13053;13054;13055;13056;13057;13058;13059;13060;13061;13062;13063;13064;13065;13066;13067;13068;13069;13070;13071;13072;13073;13074;13075;13076;13077;13078;13079 13069 31 12497000000 14733000000 0 0 14220000000 12688000000 0 0 LQELEANPPSDVYLSSRDR EYDELAETQGKLEEKLQELEANPPSDVYLS EANPPSDVYLSSRDRQILDWHFANLEFANA K L Q D R Q 1 2 1 2 0 1 2 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 19 1 2 3 2188.076 LSD1-FL-His LSD1-FL-His 510 528 yes yes 3 7.1894E-05 56.407 By MS/MS By matching 1 1 12030000 6574800 0 0 0 5455400 0 0 0 2944 24 3178 17321;17322 13080 13080 1 6574800 0 0 0 6580800 0 0 0 LQELGATR KKSARIRRATRARRKLQELGATRLVVHRTP ATRARRKLQELGATRLVVHRTPRHIYAQVI K L Q T R L 1 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 8 0 1 1 886.48723 P0C018 P0C018 18 25 rplR 50S ribosomal protein L18 yes yes 2 0.0032519 69.984 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 70498000 15913000 18603000 0 0 17450000 18533000 0 0 2945 266 3179 17323;17324;17325;17326;17327 13081;13082;13083;13084 13081 4 15913000 19042000 0 0 21050000 20730000 0 0 LQEMVADVSHHFPLR TRLYIKGNGIVDLPKLQEMVADVSHHFPLR LQEMVADVSHHFPLRLPAPTPKALYSPCEI K L Q L R L 1 1 0 1 0 1 1 0 2 0 2 0 1 1 1 1 0 0 0 2 0 0 15 0 1 2 1777.8934 P00936 P00936 520 534 cyaA Adenylate cyclase yes yes 3;4 0.00041637 54.898 By MS/MS By MS/MS 2 2 23716000 13240000 0 0 0 10476000 0 0 0 2946 31 3180 17328;17329;17330;17331 13085;13086;13087 13086 1 13240000 0 0 0 12638000 0 0 0 LQGEIAHVK EIKIEISELNRVIQRLQGEIAHVKKQCKNV NRVIQRLQGEIAHVKKQCKNVQDAIADAEQ R L Q V K K 1 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1 1 993.56073 CON__P35908v2;CON__P35908 CON__P35908v2 406 414 yes no 2 1.5099E-09 122.74 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 185870000 27961000 36274000 0 0 65763000 55869000 0 0 + 2947 16 3181 17332;17333;17334;17335;17336;17337;17338 13088;13089;13090;13091 13090 4 52550000 60851000 0 0 79331000 66106000 0 0 LQGEIAHVKK EIKIEISELNRVIQRLQGEIAHVKKQCKNV RVIQRLQGEIAHVKKQCKNVQDAIADAEQR R L Q K K Q 1 0 0 0 0 1 1 1 1 1 1 2 0 0 0 0 0 0 0 1 0 0 10 1 1 1 1121.6557 CON__P35908v2;CON__P35908 CON__P35908v2 406 415 yes no 3 0.004672 28.958 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22558000 5800400 11463000 0 0 5294900 0 0 0 + 2948 16 3182 17339;17340;17341;17342 13092;13093;13094 13094 3 5800400 11733000 0 0 6387300 0 0 0 LQIDFMTIHASK MRPASLEKAATRWPKLQIDFMTIHASKGQQ WPKLQIDFMTIHASKGQQADYVIIVGLQEG K L Q S K G 1 0 0 1 0 1 0 0 1 2 1 1 1 1 0 1 1 0 0 0 0 0 12 0 0 1 1402.7279 P15038 P15038 587 598 helD Helicase IV yes yes 3 1.7781E-07 95.094 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 113700000 25565000 28049000 0 0 34479000 25603000 0 0 2949 281 3183 17343;17344;17345;17346 13095;13096;13097;13098 13098 4 25565000 28711000 0 0 41592000 28363000 0 0 LQITAGRHGDSVRNSKIE SKAEAESLYQSKYEELQITAGRHGDSVRNS TAGRHGDSVRNSKIEISELNRVIQRLRSEI E L Q I E I 1 2 1 1 0 1 1 2 1 2 1 1 0 0 0 2 1 0 0 1 0 0 18 3 0 1 1980.0501 CON__P04264 CON__P04264 380 397 yes yes 3;4 2.9569E-09 74.786 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 200910000 0 0 40943000 25124000 0 0 50876000 83965000 + 2950 9 3184 17347;17348;17349;17350;17351;17352;17353 13099;13100;13101 13099 3 0 0 347880000 190480000 0 0 391560000 481860000 LQLHQVGRNEEA VAENPEDAALATQLALQLHQVGRNEEALEL QLALQLHQVGRNEEALELLFGHLRKDLTAA A L Q E A L 1 1 1 0 0 2 2 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 12 1 2 0 1392.711 P77395 P77395 224 235 ybbN Uncharacterized protein YbbN yes yes 3 0.017504 29.544 By MS/MS 1 0 0 0 0 0 0 0 0 0 2951 431 3185 17354 13102 13102 1 0 0 0 0 0 0 0 0 LQLKNVKTGTLAE TKGYEVIVEQQIAHELQLKNVKTGTLAEIG HELQLKNVKTGTLAEIGQLADLAVVVGGDG E L Q A E I 1 0 1 0 0 1 1 1 0 0 3 2 0 0 0 0 2 0 0 1 0 0 13 2 0 1 1413.8191 P0A7B3 P0A7B3 47 59 nadK NAD kinase yes yes 2;3 0.0028816 36.525 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 209130000 13183000 14264000 32282000 46247000 13187000 0 36514000 53449000 2952 99 3186;3187 17355;17356;17357;17358;17359;17360;17361;17362 13103;13104 13103 46;47 1 202560000 217530000 274300000 350620000 203020000 0 281020000 306740000 LQLLAYHVA PHVEEVIAPIFYTVPLQLLAYHVALIKGTD IFYTVPLQLLAYHVALIKGTDVDQPRNLAK P L Q V A L 2 0 0 0 0 1 0 0 1 0 3 0 0 0 0 0 0 0 1 1 0 0 9 0 0 1 1026.5862 P17169 P17169 581 589 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.0097164 77.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 147230000 28108000 33497000 0 0 30518000 55106000 0 0 2953 288 3188 17363;17364;17365;17366;17367;17368;17369;17370 13105;13106 13106 2 154700000 190290000 0 0 42968000 77278000 0 0 LQMELVPER DLFFEKVIFEIRDNKLQMELVPERLRGETA EIRDNKLQMELVPERLRGETASFDIEANGK K L Q E R L 0 1 0 0 0 1 2 0 0 0 2 0 1 0 1 0 0 0 0 1 0 0 9 0 2 1 1113.5852 P0A8V2 P0A8V2 237 245 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.00058802 60.436 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 2954 154 3189 17371;17372 13107;13108 13108 2 0 0 0 0 0 0 0 0 LQQAGIDVSHGLMMSEAEQLNK MQDPNPQVAGRGLYRLQQAGIDVSHGLMMS VSHGLMMSEAEQLNKGFLKRMRTGFPYIQL R L Q N K G 2 0 1 1 0 3 2 2 1 1 3 1 2 0 0 2 0 0 0 1 0 0 22 0 2 2 2398.1621 P25539 P25539 115 136 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 3 5.1618E-10 74.047 By MS/MS By MS/MS By MS/MS 1 1 1 30562000 11832000 0 0 0 8608600 10122000 0 0 2955 315 3190 17373;17374;17375 13109;13110;13111 13109 3 11832000 0 0 0 10385000 11213000 0 0 LQQIEEETGLTIEQVK KLHDVSEEVHRALQKLQQIEEETGLTIEQV QQIEEETGLTIEQVKDINRRMSIGEAKARR K L Q V K D 0 0 0 0 0 3 4 1 0 2 2 1 0 0 0 0 2 0 0 1 0 0 16 0 4 0 1856.9731 P00579 P00579 344 359 rpoD RNA polymerase sigma factor RpoD yes yes 2;3 3.4347E-176 266.69 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 2 1 244780000 60541000 63117000 0 3494400 43603000 69683000 0 4341600 2956 27 3191 17376;17377;17378;17379;17380;17381;17382;17383;17384;17385;17386 13112;13113;13114;13115;13116;13117;13118;13119;13120 13117 9 60541000 64606000 0 26493000 52599000 77194000 0 24916000 LQQIEEETGLTIEQVKDINRR KLHDVSEEVHRALQKLQQIEEETGLTIEQV ETGLTIEQVKDINRRMSIGEAKARRAKKEM K L Q R R M 0 2 1 1 0 3 4 1 0 3 2 1 0 0 0 0 2 0 0 1 0 0 21 2 4 0 2511.3293 P00579 P00579 344 364 rpoD RNA polymerase sigma factor RpoD yes yes 4 3.154E-10 77.08 By MS/MS By MS/MS By matching By matching 1 1 1 1 28510000 11817000 9554800 0 0 4392400 2745900 0 0 2957 27 3192 17387;17388;17389;17390 13121;13122 13121 2 11817000 9780400 0 0 5298600 3041800 0 0 LQQLIKE VGGCDIVIEMYQRGELQQLIKETAAKYKSE IEMYQRGELQQLIKETAAKYKSEEPDAE__ E L Q K E T 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 7 1 0 0 870.51747 P0AC69 P0AC69 96 102 grxD Glutaredoxin-4 yes yes 2 2.4726E-07 94.262 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 44947000 4353900 4054500 5783800 6729300 2580800 1890700 8538400 11015000 2958 206 3193 17391;17392;17393;17394;17395;17396;17397;17398 13123;13124;13125;13126 13124 2 66897000 61831000 49144000 51018000 39734000 28656000 65713000 63216000 LQQVGDKPRPK PAPISDKEVDAIMNRLQQVGDKPRPKTLFE IMNRLQQVGDKPRPKTLFEPGEMVRVNDGP R L Q P K T 0 1 0 1 0 2 0 1 0 0 1 2 0 0 2 0 0 0 0 1 0 0 11 2 0 2 1264.7252 P0AFG0 P0AFG0 115 125 nusG Transcription termination/antitermination protein NusG yes yes 3 3.7576E-05 91.937 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30791000 11477000 9561100 0 0 5006100 4747000 0 0 2959 245 3194 17399;17400;17401;17402 13127;13128;13129;13130 13127 4 11477000 9786700 0 0 6038900 5258600 0 0 LQSKVDLLNQE TLKKDVDNAYMIKVELQSKVDLLNQEIEFL IKVELQSKVDLLNQEIEFLKVLYDAEISQI E L Q Q E I 0 0 1 1 0 2 1 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 11 1 0 0 1285.6878 CON__P35908v2;CON__P35908 CON__P35908v2 299 309 yes no 2 3.0252E-09 80.755 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 28505000 4635900 7904100 0 8378000 4113100 3473900 0 0 + 2960 16 3195 17403;17404;17405;17406;17407;17408 13131;13132;13133 13133 3 71230000 120540000 0 63518000 63325000 52651000 0 0 LQSQLALKQSLE EITELRRNVQALEIELQSQLALKQSLEASL EIELQSQLALKQSLEASLAETEGRYCVQLS E L Q L E A 1 0 0 0 0 3 1 0 0 0 4 1 0 0 0 2 0 0 0 0 0 0 12 1 0 1 1356.7613 CON__P13645;CON__P02535-1 CON__P13645 379 390 yes no 2 0.0051022 60.518 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 32194000 3789400 3597300 4244200 4520300 2265200 1881900 4793600 7101900 + 2961 12 3196 17409;17410;17411;17412;17413;17414;17415;17416 13134;13135;13136;13137 13135 4 58224000 54859000 36062000 34271000 34875000 28522000 36892000 40757000 LQSQLSKKAALE EVTQLRHGVQELEIELQSQLSKKAALEKSL EIELQSQLSKKAALEKSLEDTKNRYCGQLQ E L Q L E K 2 0 0 0 0 2 1 0 0 0 3 2 0 0 0 2 0 0 0 0 0 0 12 2 0 2 1314.7507 CON__P35527 CON__P35527 384 395 yes yes 3 0.00059645 60.161 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 127450000 0 2627700 19199000 22518000 2844400 3198500 31536000 45529000 + 2962 15 3197 17417;17418;17419;17420;17421;17422;17423 13138 13138 1 0 40072000 163130000 170720000 43792000 48479000 242710000 261280000 LQTIIER MMTMLDPANAERYRRLQTIIERGYGLQMRE ANAERYRRLQTIIERGYGLQMRELDREFGE R L Q E R G 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 7 0 1 0 871.51272 P0A8W8 P0A8W8 32 38 yfbU UPF0304 protein YfbU yes yes 2 3.0302E-11 130.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23493000 6466700 0 0 0 7219200 9806900 0 0 2963 155 3198 17424;17425;17426;17427 13139;13140;13141;13142 13142 4 6466700 0 0 0 8708500 10864000 0 0 LQVGMRFLAE LVQRVPKDVFMGVDELQVGMRFLAETDQGP MGVDELQVGMRFLAETDQGPVPVEITAVED E L Q A E T 1 1 0 0 0 1 1 1 0 0 2 0 1 1 0 0 0 0 0 1 0 0 10 1 0 1 1162.6169 P0A9K9 P0A9K9 90 99 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 1.007E-35 151.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 3 8 8 3 5 6983000000 288940000 286720000 294890000 305410000 1739700000 1550800000 989840000 1526700000 2964 169 3199;3200 17428;17429;17430;17431;17432;17433;17434;17435;17436;17437;17438;17439;17440;17441;17442;17443;17444;17445;17446;17447;17448;17449;17450;17451;17452;17453;17454;17455;17456;17457;17458;17459;17460;17461;17462;17463;17464;17465 13143;13144;13145;13146;13147;13148;13149;13150;13151;13152;13153;13154;13155;13156;13157;13158;13159;13160;13161;13162;13163;13164;13165;13166;13167;13168;13169;13170;13171;13172;13173;13174;13175;13176;13177;13178;13179;13180;13181;13182 13170 161 38 4434300000 4372500000 2505700000 2315500000 26775000000 23490000000 7618000000 8761300000 LQVGMRFLAETDQGPVPVE LVQRVPKDVFMGVDELQVGMRFLAETDQGP MRFLAETDQGPVPVEITAVEDDHVVVDGNH E L Q V E I 1 1 0 1 0 2 2 2 0 0 2 0 1 1 2 0 1 0 0 3 0 0 19 1 1 3 2085.0565 P0A9K9 P0A9K9 90 108 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 1.6815E-13 92.925 By MS/MS By MS/MS 2 2 57370000 0 0 0 0 27162000 30208000 0 0 2965 169 3201;3202 17466;17467;17468;17469 13183;13184;13185;13186 13185 161 3 0 0 0 0 418190000 457850000 0 0 LQVTSEK NPDILMRLSAQMARRLQVTSEKVGNLAFLD LSAQMARRLQVTSEKVGNLAFLDVTGRIAQ R L Q E K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 7 0 1 0 803.43888 P0ACJ8 P0ACJ8 125 131 crp cAMP-activated global transcriptional regulator CRP yes yes 2 4.618E-17 138.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3396000000 950200000 1023400000 0 0 758470000 663890000 0 0 2966 213 3203 17470;17471;17472;17473 13187;13188;13189;13190;13191;13192;13193;13194;13195;13196 13190 10 950200000 1047600000 0 0 914950000 735440000 0 0 LQVTVGRHGDSLKE SKEEAEALYHSKYEELQVTVGRHGDSLKEI ELQVTVGRHGDSLKEIKIEISELNRVIQRL E L Q K E I 0 1 0 1 0 1 1 2 1 0 2 1 0 0 0 1 1 0 0 2 0 0 14 2 0 0 1537.8213 CON__P35908v2;CON__P35908 CON__P35908v2 378 391 yes no 3 0.00086467 61.212 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40416000 0 0 8393000 14512000 0 0 6263500 11248000 + 2967 16 3204 17474;17475;17476;17477 13197;13198;13199 13198 3 0 0 71314000 110020000 0 0 48206000 64548000 LQYYVNTDQLVVR LPYLYEINLRRFLSRLQYYVNTDQLVVRLW SRLQYYVNTDQLVVRLWKDDDNTYHLKGMW R L Q V R L 0 1 1 1 0 2 0 0 0 0 2 0 0 0 0 0 1 0 2 3 0 0 13 0 0 0 1609.8464 P23830 P23830 335 347 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 1.9256E-07 93.058 By MS/MS 1 3224500 0 0 0 0 0 3224500 0 0 2968 304 3205 17478 13200 13200 1 0 0 0 0 0 3572000 0 0 LRAEIDNVK NTKHEISEMNRMIQRLRAEIDNVKKQCANL NRMIQRLRAEIDNVKKQCANLQNAIADAEQ R L R V K K 1 1 1 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 9 1 1 1 1056.5928 CON__P13647 CON__P13647 396 404 yes yes 2 0.0054973 77.732 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 13610000 2136800 1897200 0 0 3600000 4680200 1295600 0 + 2969 13 3206 17479;17480;17481;17482;17483 13201;13202 13201 2 2136800 1942000 0 0 4342700 5184600 9971600 0 LRAEIDNVKK NTKHEISEMNRMIQRLRAEIDNVKKQCANL RMIQRLRAEIDNVKKQCANLQNAIADAEQR R L R K K Q 1 1 1 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1 1 1184.6877 CON__P13647 CON__P13647 396 405 yes yes 3 0.00027035 80.706 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43907000 9309500 9184600 0 0 11760000 13653000 0 0 + 2970 13 3207 17484;17485;17486;17487 13203;13204 13204 2 9309500 9401400 0 0 14186000 15124000 0 0 LRDDSDGYGPR PVERYLSLLTGELPRLRDDSDGYGPRGRDF ELPRLRDDSDGYGPRGRDFIVHVDFPAEVI R L R P R G 0 2 0 3 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 11 1 0 1 1249.5687 P34209 P34209 219 229 ydcF Protein YdcF yes yes 2;3 7.7423E-12 100.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 61021000 19738000 25459000 0 0 11126000 4698100 0 0 2971 347 3208 17488;17489;17490;17491;17492;17493;17494 13205;13206;13207;13208;13209;13210;13211 13207 7 19738000 26060000 0 0 13421000 5204400 0 0 LREEIAEQHR QADLENGVNLEQTIRLREEIAEQHRALGQM EQTIRLREEIAEQHRALGQMKEMAAKYGYD R L R H R A 1 2 0 0 0 1 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 10 1 3 1 1279.6633 P09373 P09373 220 229 pflB Formate acetyltransferase 1 yes yes 3 0.00025993 65.5 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16856000 3553200 6828700 0 0 3164800 3309100 0 0 2972 63 3209 17495;17496;17497;17498 13212;13213;13214;13215 13213 4 3553200 6989900 0 0 3817800 3665800 0 0 LRGDEAVALLQMTPFAWR GFTLQQSAELCYPMRLRGDEAVALLQMTPF DEAVALLQMTPFAWRAKPEVWQTLAAKEVF R L R W R A 3 2 0 1 0 1 1 1 0 0 3 0 1 1 1 0 1 1 0 1 0 0 18 1 1 4 2073.083 P36999 P36999 222 239 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 3 0.0078766 34.274 By matching By MS/MS By matching By MS/MS 1 1 1 1 112780000 15052000 24913000 0 0 31448000 41363000 0 0 2973 352 3210 17499;17500;17501;17502 13216;13217 13216 1 15052000 25501000 0 0 37936000 45821000 0 0 LRGGVDVLVATPGR LVVFGGVSINPQMMKLRGGVDVLVATPGRL KLRGGVDVLVATPGRLLDLEHQNAVKLDQV K L R G R L 1 2 0 1 0 0 0 3 0 0 2 0 0 0 1 0 1 0 0 3 0 0 14 1 0 2 1408.815 P25888 P25888 122 135 rhlE ATP-dependent RNA helicase RhlE yes yes 3 1.0007E-07 62.287 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29034000 0 0 0 0 8864100 20170000 0 0 2974 318 3211 17503;17504;17505;17506 13218;13219;13220;13221;13222 13218 5 0 0 0 0 10693000 22344000 0 0 LRHDDAYTPDNVAGK GNMDSMINRYTADRRLRHDDAYTPDNVAGK LRHDDAYTPDNVAGKRPDRATLVYTQRCKE R L R G K R 2 1 1 3 0 0 0 1 1 0 1 1 0 0 1 0 1 0 1 1 0 0 15 1 0 3 1670.8012 Q46861 Q46861 121 135 ygiQ UPF0313 protein YgiQ yes yes 3 0.0026448 51.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17403000 5138800 0 4732500 2888900 4642800 0 0 0 2975 441 3212 17507;17508;17509;17510 13223;13224 13224 2 5138800 0 40211000 21902000 5600600 0 0 0 LRNFTGIDSVYEAPE ARDPKGLYKKARAGELRNFTGIDSVYEAPE LRNFTGIDSVYEAPESAEIHLNGEQLVTNL E L R P E S 1 1 1 1 0 0 2 1 0 1 1 0 0 1 1 1 1 0 1 1 0 0 15 1 1 2 1709.8261 P0A6J1 P0A6J1 156 170 cysC Adenylyl-sulfate kinase yes yes 2 2.3196E-14 89.266 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 94351000 5940500 4623700 20781000 16768000 0 0 25116000 21122000 2976 73 3213 17511;17512;17513;17514;17515;17516 13225;13226;13227;13228;13229;13230 13227 6 91274000 70512000 176570000 127120000 0 0 193300000 121220000 LRPMTGLDKPVAAFLDR VFDVRFLPNPHWDPKLRPMTGLDKPVAAFL PMTGLDKPVAAFLDRHTEVHNFIYQTRSYL K L R D R H 2 2 0 2 0 0 0 1 0 0 3 1 1 1 2 0 1 0 0 1 0 0 17 2 0 4 1899.04 P0A894 P0A894 195 211 rapZ RNase adapter protein RapZ yes yes 3;4 1.3533E-29 126.84 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 281520000 54380000 91570000 0 0 66878000 68688000 0 0 2977 141 3214;3215 17517;17518;17519;17520;17521;17522;17523;17524;17525;17526;17527;17528 13231;13232;13233;13234;13235;13236;13237;13238;13239;13240;13241;13242 13237 134 12 54380000 93732000 0 0 80675000 76091000 0 0 LRQIVLNCGEEP QNVGIKVALRAMEAPLRQIVLNCGEEPSVV EAPLRQIVLNCGEEPSVVANTVKGGDGNYG P L R E P S 0 1 1 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 0 1 0 0 12 1 2 0 1426.7238 P0A6F5 P0A6F5 451 462 groL 60 kDa chaperonin yes yes 2 6.7524E-07 90.629 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49663000 6892600 7274100 0 0 11045000 24452000 0 0 2978 68 3216 17529;17530;17531;17532 13243;13244;13245;13246 13246 4 41608000 43535000 0 0 15724000 34856000 0 0 LRRNVQALE NNIEQISSYKSEITELRRNVQALEIELQSQ KSEITELRRNVQALEIELQSQLALKQSLEA E L R L E I 1 2 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 2 0 1 1097.6305 CON__P13645 CON__P13645 368 376 yes yes 3 0.010772 59.245 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 75505000 14241000 9576100 0 0 265640 643470 20001000 30777000 + 2979 12 3217 17533;17534;17535;17536;17537;17538 13247;13248;13249;13250 13249 2 218820000 146040000 0 0 4089800 9752800 153930000 176630000 LRSEIDNVK NSKIEISELNRVIQRLRSEIDNVKKQISNL NRVIQRLRSEIDNVKKQISNLQQSISDAEQ R L R V K K 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1 0 1072.5877 CON__P04264 CON__P04264 408 416 no no 2;3 6.1908E-47 162.88 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 440920000 53600000 58918000 0 0 151400000 177010000 0 0 + 2980 9 3218 17539;17540;17541;17542;17543;17544;17545;17546 13251;13252;13253;13254;13255;13256;13257;13258 13257 8 53600000 60308000 0 0 182630000 196090000 0 0 LRSEIDNVKK NSKIEISELNRVIQRLRSEIDNVKKQISNL RVIQRLRSEIDNVKKQISNLQQSISDAEQR R L R K K Q 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 2 1 0 1200.6826 CON__P04264 CON__P04264 408 417 no no 2;3 4.5603E-15 129.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 687930000 154430000 178790000 0 0 170860000 183860000 0 0 + 2981 9 3219 17547;17548;17549;17550;17551;17552;17553;17554;17555 13259;13260;13261;13262;13263;13264;13265;13266;13267 13262 9 154430000 183010000 0 0 214370000 203670000 0 0 LRSRDGGIIGE LMVKEDFRIILAGGELRSRDGGIIGEATLD AGGELRSRDGGIIGEATLDFISQFRLDFGI E L R G E A 0 2 0 1 0 0 1 3 0 2 1 0 0 0 0 1 0 0 0 0 0 0 11 2 0 0 1171.6309 P0ACL0 P0ACL0 144 154 glpR Glycerol-3-phosphate regulon repressor yes yes 3 0.011463 40.715 By MS/MS By MS/MS 1 1 17234000 0 0 0 0 0 0 7138900 10095000 2982 215 3220 17556;17557 13268;13269 13268 2 0 0 0 0 0 0 54942000 57936000 LSAAERE ______________________________ QPQTEAFELSAAEREAIEHEMHHYEDPRAA E L S R E A 2 1 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 1 1 2 774.38718 P0AFD1 P0AFD1 14 20 nuoE NADH-quinone oxidoreductase subunit E yes yes 2 0.0007029 81.297 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 1 1 267360000 10875000 10492000 42980000 59627000 4941800 5522700 57564000 75357000 2983 244 3221 17558;17559;17560;17561;17562;17563;17564;17565;17566;17567 13270;13271;13272;13273;13274;13275 13270 4 138050000 160000000 365190000 452070000 76084000 71687000 443030000 432460000 LSAELAGENEGVDHK LAQHNAHFLVEFMAKLSAELAGENEGVDHK LSAELAGENEGVDHKVIDAFSSAG______ K L S H K V 2 0 1 1 0 0 3 2 1 0 2 1 0 0 0 1 0 0 0 1 0 0 15 0 3 2 1567.7478 P46144 P46144 208 222 yedJ Uncharacterized protein YedJ yes yes 2;3 4.9611E-78 180.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 120120000 46301000 34848000 0 0 19485000 19491000 0 0 2984 371 3222 17568;17569;17570;17571;17572;17573;17574;17575 13276;13277;13278;13279;13280;13281;13282;13283 13277 7 46301000 35671000 0 0 23505000 21592000 0 0 LSAQMAR KFRQLIQVNPDILMRLSAQMARRLQVTSEK VNPDILMRLSAQMARRLQVTSEKVGNLAFL R L S A R R 2 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 7 0 0 2 775.40106 P0ACJ8 P0ACJ8 117 123 crp cAMP-activated global transcriptional regulator CRP yes yes 2 2.6183E-45 168.62 By MS/MS By MS/MS By MS/MS By MS/MS 4 6 6 5 6906200000 2246500000 2113200000 0 0 1339900000 1206500000 0 0 2985 213 3223;3224 17576;17577;17578;17579;17580;17581;17582;17583;17584;17585;17586;17587;17588;17589;17590;17591;17592;17593;17594;17595;17596 13284;13285;13286;13287;13288;13289;13290;13291;13292;13293;13294;13295;13296;13297;13298;13299;13300;13301;13302;13303;13304;13305;13306;13307;13308;13309;13310;13311;13312;13313;13314;13315;13316 13311 189 33 2246500000 2163100000 0 0 1616300000 1336600000 0 0 LSASYVGEDNER WQCGTVQLDFSLPSRLSASYVGEDNERKVP PSRLSASYVGEDNERKVPVMIHRAILGSME R L S E R K 1 1 1 1 0 0 2 1 0 0 1 0 0 0 0 2 0 0 1 1 0 0 12 0 2 1 1338.6052 P0A8M3 P0A8M3 493 504 thrS Threonine--tRNA ligase yes yes 2 2.8132E-84 185.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 106140000 31610000 24285000 0 0 22640000 27604000 0 0 2986 147 3225 17597;17598;17599;17600 13317;13318;13319;13320 13318 4 31610000 24858000 0 0 27310000 30579000 0 0 LSDAAENKGTAVKKRE RKRGDKSMALRLANELSDAAENKGTAVKKR SDAAENKGTAVKKREDVHRMAEANKAFAHY E L S R E D 3 1 1 1 0 0 2 1 0 0 1 3 0 0 0 1 1 0 0 1 0 0 16 4 1 3 1715.9166 P02359 P02359 124 139 rpsG 30S ribosomal protein S7 yes yes 3 0.0098581 26.729 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 7329600 979760 739620 0 1349200 562620 800580 0 2897800 2987 36 3226 17601;17602;17603;17604;17605;17606 13321 13321 1 15054000 11279000 0 10229000 8662000 12134000 0 16630000 LSDEIKSLP RNSVIDEVVVCDTIPLSDEIKSLPNVRTLT VCDTIPLSDEIKSLPNVRTLTLSGMLAEAI P L S L P N 0 0 0 1 0 0 1 0 0 1 2 1 0 0 1 2 0 0 0 0 0 0 9 1 1 0 1000.5441 P0A717 P0A717 277 285 prs Ribose-phosphate pyrophosphokinase yes yes 2 0.0047806 75.213 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33902000 4278200 3917600 0 0 14618000 11089000 0 0 2988 91 3227 17607;17608;17609;17610 13322;13323 13323 0 25826000 23447000 0 0 20811000 15807000 0 0 LSDEVTDSPMVDK FLGDWSVYGTARYTRLSDEVTDSPMVDKSW TRLSDEVTDSPMVDKSWTGLISTGITYKF_ R L S D K S 0 0 0 3 0 0 1 0 0 0 1 1 1 0 1 2 1 0 0 2 0 0 13 0 1 1 1434.6548 P0A908 P0A908 222 234 mipA MltA-interacting protein yes yes 2 3.014E-07 88.441 By MS/MS 1 3041000 0 0 0 0 0 3041000 0 0 2989 157 3228 17611 13324 13324 1 0 0 0 0 0 3368700 0 0 LSDKAVRHAE MYKTIIMPVDVFEMELSDKAVRHAEFLAQD VFEMELSDKAVRHAEFLAQDDGVIHLLHVL E L S A E F 2 1 0 1 0 0 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 10 2 0 2 1124.5938 P39177 P39177 16 25 uspG Universal stress protein G yes yes 2 0.016867 45.161 By MS/MS By MS/MS 1 1 6278000 0 0 0 0 0 0 3502500 2775400 2990 362 3229 17612;17613 13325 13325 1 0 0 0 0 0 0 26956000 15928000 LSDKVTFKE AKSAEIKELLAEIAELSDKVTFKEDNSLPV LAEIAELSDKVTFKEDNSLPVRKPSFLITN E L S K E D 0 0 0 1 0 0 1 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 9 2 0 0 1065.5706 P35340 P35340 46 54 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 9.2465E-72 169.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 2989900000 146410000 137690000 514770000 641450000 68385000 105660000 560080000 815410000 2991 348 3230 17614;17615;17616;17617;17618;17619;17620;17621;17622;17623;17624;17625;17626;17627;17628;17629 13326;13327;13328;13329;13330;13331;13332;13333;13334 13334 8 2249600000 2099800000 4373900000 4863200000 1052800000 1601500000 4310500000 4679500000 LSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHE AKSAEIKELLAEIAELSDKVTFKEDNSLPV SNQGPRFAGSPLGHEFTSLVLALLWTGGHP E L S H E F 1 2 3 2 0 1 2 4 1 1 4 3 0 3 5 5 2 0 0 2 0 0 41 5 1 6 4436.2877 P35340 P35340 46 86 ahpF Alkyl hydroperoxide reductase subunit F yes yes 6 0.018378 6.9849 By MS/MS 1 9226100 0 0 0 0 9226100 0 0 0 2992 348 3231 17630 13335;13336 13335 2 0 0 0 0 142040000 0 0 0 LSDLYDKHIHDQSE VMRYWFEEPYEAFVELSDLYDKHIHDQSER ELSDLYDKHIHDQSERRFVVECDGEKAGLV E L S S E R 0 0 0 3 0 1 1 0 2 1 2 1 0 0 0 2 0 0 1 0 0 0 14 1 0 0 1698.7849 P0A951 P0A951 44 57 speG Spermidine N(1)-acetyltransferase yes yes 3 1.6176E-17 116.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 263280000 26453000 30013000 32659000 34909000 17944000 18600000 45409000 57290000 2993 160 3232 17631;17632;17633;17634;17635;17636;17637;17638 13337;13338;13339;13340;13341 13337 5 406440000 457690000 277500000 264670000 276270000 281910000 349470000 328780000 LSDLYDKHIHDQSERRFVVE VMRYWFEEPYEAFVELSDLYDKHIHDQSER DKHIHDQSERRFVVECDGEKAGLVELVEIN E L S V E C 0 2 0 3 0 1 2 0 2 1 2 1 0 1 0 2 0 0 1 2 0 0 20 3 1 0 2485.235 P0A951 P0A951 44 63 speG Spermidine N(1)-acetyltransferase yes yes 4 0.00039678 35.176 By MS/MS By matching By matching 1 1 1 20110000 0 0 0 0 0 2691500 8171700 9247000 2994 160 3233 17639;17640;17641 13342 13342 1 0 0 0 0 0 40793000 62892000 53067000 LSDYGVQLR KIEQAPGQHGARKPRLSDYGVQLREKQKVR GARKPRLSDYGVQLREKQKVRRIYGVLERQ R L S L R E 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 0 0 1049.5506 P0A7V8 P0A7V8 48 56 rpsD 30S ribosomal protein S4 yes yes 2 2.4385E-138 197.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 371800000 205400000 0 0 0 166400000 0 0 0 2995 130 3234 17642;17643;17644;17645 13343;13344;13345;13346 13344 4 205400000 0 0 0 200730000 0 0 0 LSEALEQVR HVGIQISHPHELESKLSEALEQVRNNRLVF HELESKLSEALEQVRNNRLVFVDVTVDGSE K L S V R N 1 1 0 0 0 1 2 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 9 0 2 1 1043.5611 P00893 P00893 528 536 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 1.6573E-128 210.26 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 246300000 65676000 70780000 0 0 50268000 56919000 0 2656300 2996 29 3235 17646;17647;17648;17649;17650;17651 13347;13348;13349;13350 13347 4 67140000 72451000 0 0 60639000 63054000 0 15244000 LSEKEFAHLQTLLPKPPAHHPHYAFR AILKRALANDSAWHRLSEKEFAHLQTLLPK LLPKPPAHHPHYAFRFIDLFAGIGGIRRGF R L S F R F 3 1 0 0 0 1 2 0 4 0 4 2 0 2 4 1 1 0 1 0 0 0 26 2 2 7 3063.6195 P0AED9 P0AED9 63 88 dcm DNA-cytosine methyltransferase yes yes 6 6.942E-08 49.25 By MS/MS By MS/MS By MS/MS 1 1 1 33497000 0 7339200 0 0 8835300 17322000 0 0 2997 235 3236 17652;17653;17654 13351;13352;13353 13353 3 0 7512400 0 0 10658000 19189000 0 0 LSEQGLITR LLDVSTQTVRRDIRKLSEQGLITRHHGGAG RRDIRKLSEQGLITRHHGGAGRASSVVNTA K L S T R H 0 1 0 0 0 1 1 1 0 1 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1 0 1015.5662 P32144 P32144 48 56 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 1.628E-06 111.95 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26456000 7862500 6787000 0 0 5741700 6065300 0 0 2998 339 3237 17655;17656;17657;17658 13354;13355;13356;13357 13357 4 7862500 6947200 0 0 6926200 6719000 0 0 LSFETSMHR KVIASCFFEASTRTRLSFETSMHRLGASVV ASTRTRLSFETSMHRLGASVVGFSDSANTS R L S H R L 0 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 1 0 0 0 0 0 9 0 1 0 1106.5179 P0A786 P0A786 58 66 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 3 0.0015889 56.432 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29859000 7943600 5885100 0 0 5670200 10360000 0 0 2999 97 3238 17659;17660;17661;17662 13358;13359;13360 13360 3 7943600 6024000 0 0 6840000 11476000 0 0 LSFSLPADMTDQSGK ESNATGNPVNLLDGKLSFSLPADMTDQSGK LSFSLPADMTDQSGKLGTQANNMHVWSDAT K L S G K L 1 0 0 2 0 1 0 1 0 0 2 1 1 1 1 3 1 0 0 0 0 0 15 0 0 2 1595.7501 P0AEE1 P0AEE1 50 64 dcrB Protein DcrB yes yes 2 0.0010237 59.418 By MS/MS By matching By matching By MS/MS 1 1 1 1 20697000 4837100 4687000 0 0 5717600 5455800 0 0 3000 236 3239 17663;17664;17665;17666 13361;13362 13362 2 4837100 4797600 0 0 6897200 6043800 0 0 LSGDTLDGETAFR TLERGLALLDEELAKLSGDTLDGETAFRLY AKLSGDTLDGETAFRLYDTYGFPVDLTADV K L S F R L 1 1 0 2 0 0 1 2 0 0 2 0 0 1 0 1 2 0 0 0 0 0 13 0 1 1 1380.6521 P00957 P00957 385 397 alaS Alanine--tRNA ligase yes yes 2 0.004078 54.259 By MS/MS By MS/MS 1 1 11202000 0 0 0 0 11202000 0 0 0 3001 33 3240 17667;17668 13363;13364 13363 2 0 0 0 0 13513000 0 0 0 LSGLVLDEADEMLR RLLDHLKRGTLDLSKLSGLVLDEADEMLRM KLSGLVLDEADEMLRMGFIEDVETIMAQIP K L S L R M 1 1 0 2 0 0 2 1 0 0 4 0 1 0 0 1 0 0 0 1 0 0 14 0 2 1 1559.7865 P0A9P6 P0A9P6 150 163 deaD ATP-dependent RNA helicase DeaD yes yes 2 0.00065034 62.408 By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 44486000 11948000 17520000 1893700 0 13124000 0 0 0 3002 173 3241 17669;17670;17671;17672;17673 13365;13366;13367 13365 3 11948000 17934000 16091000 0 15831000 0 0 0 LSGVLNGVDEK YGMEGLLQQRHREGRLSGVLNGVDEKIWSP REGRLSGVLNGVDEKIWSPETDLLLASRYT R L S E K I 0 0 1 1 0 0 1 2 0 0 2 1 0 0 0 1 0 0 0 2 0 0 11 0 1 0 1129.5979 P0A6U8 P0A6U8 241 251 glgA Glycogen synthase yes yes 2 0.0017406 68.657 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 14556000 3945600 4192200 0 0 1917900 4500300 0 0 3003 83 3242 17674;17675;17676;17677 13368;13369;13370 13369 1 3945600 4291100 0 0 2313600 4985300 0 0 LSGYAKPEER VTLLDESQLDALLDKLSGYAKPEERILILA ALLDKLSGYAKPEERILILARYHHMRPASL K L S E R I 1 1 0 0 0 0 2 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 10 1 2 2 1148.5826 P15038 P15038 553 562 helD Helicase IV yes yes 2;3 0.00029068 87.258 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 109880000 25134000 38848000 0 0 26287000 19607000 0 0 3004 281 3243 17678;17679;17680;17681;17682;17683;17684;17685 13371;13372;13373;13374;13375;13376;13377 13373 7 25134000 39765000 0 0 31710000 21720000 0 0 LSHKLDHEPSAEE HIVKELNVYLRTARELSHKLDHEPSAEEIA RELSHKLDHEPSAEEIAEQLDKPVDDVSRM E L S E E I 1 0 0 1 0 0 3 0 2 0 2 1 0 0 1 2 0 0 0 0 0 0 13 1 2 2 1490.7001 P13445 P13445 185 197 rpoS RNA polymerase sigma factor RpoS yes yes 3 0.0050709 38.021 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 80365000 6993500 10760000 6558500 13213000 3319400 4437500 16149000 18933000 3005 279 3244 17686;17687;17688;17689;17690;17691;17692;17693 13378 13378 0 107450000 164090000 55726000 100180000 51105000 67257000 124290000 108650000 LSHNIATLK AELLRITGAKAIDWKLSHNIATLKRVKNQP KAIDWKLSHNIATLKRVKNQPGINGVKNII K L S L K R 1 0 1 0 0 0 0 0 1 1 2 1 0 0 0 1 1 0 0 0 0 0 9 0 0 1 995.57638 P0AF08 P0AF08 87 95 mrp Protein mrp yes yes 2 0.0045677 59.153 By MS/MS By MS/MS 1 1 13668000 0 0 0 0 0 3967600 9700200 0 3006 241 3245 17694;17695 13379 13379 1 0 0 0 0 0 4395300 74655000 0 LSHQTNTLPE WLKLANEGRIFEAAELSHQTNTLPEVCGRV FEAAELSHQTNTLPEVCGRVCPQDRLCEGS E L S P E V 0 0 1 0 0 1 1 0 1 0 2 0 0 0 1 1 2 0 0 0 0 0 10 0 0 1 1138.5619 P09832;P37127 P09832 83 92 gltD;aegA Glutamate synthase [NADPH] small chain;Protein AegA no no 2 0.00086542 74.127 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 48336000 5747100 6519200 8572100 8685500 0 0 8436700 10376000 3007 65;355 3246 17696;17697;17698;17699;17700;17701 13380;13381 13380 1 88302000 99418000 72836000 65850000 0 0 64931000 59543000 LSIQVVKKAE MTEAPSFANPTALAELSIQVVKKAENN___ TALAELSIQVVKKAENN_____________ E L S A E N 1 0 0 0 0 1 1 0 0 1 1 2 0 0 0 1 0 0 0 2 0 0 10 2 0 1 1113.6758 P21889 P21889 579 588 aspS Aspartate--tRNA ligase yes yes 2 0.017223 28.209 By MS/MS By MS/MS By matching 1 1 1 5323100 1372000 1756600 0 0 0 0 0 2194600 3008 298 3247 17702;17703;17704 13382 13382 1 21080000 26788000 0 0 0 0 0 12594000 LSIQVVKKAENN MTEAPSFANPTALAELSIQVVKKAENN___ LAELSIQVVKKAENN_______________ E L S N N - 1 0 2 0 0 1 1 0 0 1 1 2 0 0 0 1 0 0 0 2 0 0 12 2 1 1 1341.7616 P21889 P21889 579 590 aspS Aspartate--tRNA ligase yes yes 3 0.00071329 56.225 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 27685000 0 2713600 4369200 10050000 2395300 3864300 4292900 0 3009 298 3248 17705;17706;17707;17708;17709;17710 13383;13384;13385 13385 3 0 41383000 37124000 76193000 36878000 58569000 33039000 0 LSKIRSKAE LEEVLSSSGEKSKEELSKIRSKAEQALKQS EKSKEELSKIRSKAEQALKQSRYRLGETGD E L S A E Q 1 1 0 0 0 0 1 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 9 3 0 1 1030.6135 P64581 P64581 36 44 yqjD Uncharacterized protein YqjD yes yes 3 0.01095 51.445 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39439000 0 0 7527100 7670900 0 0 10447000 13795000 3010 397 3249 17711;17712;17713;17714 13386;13387 13386 2 0 0 63957000 58157000 0 0 80400000 79165000 LSKVVRPYIRE TPFEQRHIVDGFSFELSKVVRPYIRERVVD FSFELSKVVRPYIRERVVDQLAHIDLTLAQ E L S R E R 0 2 0 0 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 2 0 0 11 3 0 1 1358.8034 P21179 P21179 531 541 katE Catalase HPII yes yes 3;4 0.0045241 48.741 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 50178000 0 1081100 12355000 11076000 1158900 0 11973000 12534000 3011 293 3250 17715;17716;17717;17718;17719;17720;17721;17722;17723;17724 13388;13389;13390;13391 13389 3 0 16486000 104980000 83973000 17842000 0 92145000 71931000 LSLYADER TRELVYTAVTRARRRLSLYADERILSAAIA VTRARRRLSLYADERILSAAIATRTERRSG R L S E R I 1 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 8 0 1 1 965.48181 P04993 P04993 577 584 recD RecBCD enzyme subunit RecD yes yes 2 0.0010841 96.492 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 61965000 11904000 8508700 0 0 7006000 0 0 34547000 3012 46 3251 17725;17726;17727;17728;17729 13392;13393;13394 13392 3 37149000 8709500 0 0 8451300 0 0 198260000 LSNAGIR ITDSQSEYVNELTQKLSNAGIRVKADLRNE YVNELTQKLSNAGIRVKADLRNEKIGFKIR K L S I R V 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 0 1 729.41334 P0A8M3 P0A8M3 562 568 thrS Threonine--tRNA ligase yes yes 2 0.0088168 57.463 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 51979000 14973000 16378000 0 0 11094000 9533400 0 0 3013 147 3252 17730;17731;17732;17733;17734 13395;13396 13395 2 14973000 16764000 0 0 13383000 10619000 0 0 LSPHVLR RIKHYAVLAGIDSEKLSPHVLRHAFATHLL LAGIDSEKLSPHVLRHAFATHLLNHGADLR K L S L R H 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 1 0 0 0 1 0 0 7 0 0 1 820.49192 P0A8P8 P0A8P8 241 247 xerD Tyrosine recombinase XerD yes yes 2 1.5277E-11 99.919 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 180180000 47830000 36688000 0 0 46565000 49096000 0 0 3014 151 3253 17735;17736;17737;17738 13397;13398;13399;13400 13398 1 47830000 37554000 0 0 56171000 54387000 0 0 LSPSLGESSHHVCPR SHISRFGLLEMSRQRLSPSLGESSHHVCPR LSPSLGESSHHVCPRCSGTGTVRDNESLSL R L S P R C 0 1 0 0 1 0 1 1 2 0 2 0 0 0 2 4 0 0 0 1 0 0 15 0 1 2 1661.7944 P21513 P21513 392 406 rne Ribonuclease E yes yes 4 0.022389 17.744 By matching By MS/MS By matching 1 1 1 9307800 4092600 3144100 0 0 2071100 0 0 0 3015 297 3254 17739;17740;17741 13401 13401 1 4092600 3218300 0 0 2498300 0 0 0 LSQMQTQISE LQQEIDFLTALYQAELSQMQTQISETNVIL LYQAELSQMQTQISETNVILSMDNNRSLDL E L S S E T 0 0 0 0 0 3 1 0 0 1 1 0 1 0 0 2 1 0 0 0 0 0 10 0 0 0 1163.5492 CON__P04264 CON__P04264 323 332 yes yes 2 4.4512E-06 111.74 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 137800000 22984000 25020000 3281500 2713200 18956000 19685000 45156000 0 + 3016 9 3255;3256 17742;17743;17744;17745;17746;17747;17748;17749;17750;17751;17752 13402;13403;13404;13405;13406;13407;13408 13404 6 6 353140000 381560000 27882000 20570000 291840000 298360000 347530000 0 LSSAQQTDVNLPYITADATGPKHMNIKVTRAKLE AMQRLKEAAEKAKIELSSAQQTDVNLPYIT GPKHMNIKVTRAKLESLVEDLVNRSIEPLK E L S L E S 4 1 2 2 0 2 1 1 1 2 3 3 1 0 2 2 4 0 1 2 0 0 34 4 0 6 3709.9461 P0A6Y8 P0A6Y8 273 306 dnaK Chaperone protein DnaK yes yes 5 0.00042619 46.31 By MS/MS By MS/MS 1 1 21629000 0 0 0 0 15788000 5841000 0 0 3017 86 3257 17753;17754 13409;13410;13411 13411 3 0 0 0 0 243080000 88529000 0 0 LSSPATLNSR NFNGNTLDNDIMLIKLSSPATLNSRVATVS IMLIKLSSPATLNSRVATVSLPRSCAAAGT K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 10 0 0 2 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 8.9604E-15 130.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1875300000 573360000 640920000 0 0 343470000 317560000 0 0 + 3018 3 3258 17755;17756;17757;17758;17759 13412;13413;13414;13415 13415 4 573360000 656050000 0 0 414330000 351780000 0 0 LSSVSHPEYIGR LAKLATPFAEGEALRLSSVSHPEYIGRVAK ALRLSSVSHPEYIGRVAKFFSDIGGRALLM R L S G R V 0 1 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 0 1 1 0 0 12 0 1 1 1343.6834 P30177 P30177 199 210 ybiB Uncharacterized protein YbiB yes yes 2;3 0.00059787 61.11 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 337620000 91730000 78160000 0 0 89404000 78328000 0 0 3019 332 3259 17760;17761;17762;17763;17764;17765;17766;17767;17768;17769 13416;13417;13418;13419;13420 13419 4 91730000 80004000 0 0 107850000 86770000 0 0 LSTDEVK DVQGSVEAISDSLLKLSTDEVKVKIIGSGV AISDSLLKLSTDEVKVKIIGSGVGGITETD K L S V K V 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 7 0 1 0 790.40725 P0A705;P0A705-3;P0A705-2 P0A705 711 717 infB Translation initiation factor IF-2 yes no 2 0.0029306 76.035 By MS/MS 1 39610000 39610000 0 0 0 0 0 0 0 3020 90 3260 17770 13421 13421 1 39610000 0 0 0 0 0 0 0 LSTNVKRHDAHRFYLRE WAEEEARQAGAEMTELSTNVKRHDAHRFYL TNVKRHDAHRFYLREGYEQSHFRFTKAL__ E L S R E G 1 3 1 1 0 0 1 0 2 0 2 1 0 1 0 1 1 0 1 1 0 0 17 4 0 1 2141.1243 P16691 P16691 115 131 phnO Protein PhnO yes yes 4 0.020774 15.155 By MS/MS By MS/MS 1 1 3707800 0 1019500 0 0 0 2688200 0 0 3021 286 3261 17771;17772 13422 13422 1 0 15548000 0 0 0 40744000 0 0 LTALETALKGEDKA GDKLPADDKTAIESALTALETALKGEDKAA ALTALETALKGEDKAAIEAKMQELAQVSQK A L T K A A 3 0 0 1 0 0 2 1 0 0 3 2 0 0 0 0 2 0 0 0 0 0 14 2 2 2 1458.793 P0A6Y8 P0A6Y8 569 582 dnaK Chaperone protein DnaK yes yes 2;3 7.2973E-17 103.85 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 31115000 3893700 5657100 0 0 6410300 15154000 0 0 3022 86 3262 17773;17774;17775;17776;17777;17778;17779;17780 13423;13424;13425 13423 3 23505000 33858000 0 0 9126300 21602000 0 0 LTARPILDIALQYR YIRARRLSKSAVALRLTARPILDIALQYRF RLTARPILDIALQYRFDSQQTFTRAFKKQF R L T Y R F 2 2 0 1 0 1 0 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 14 1 0 3 1641.9566 P0ACI0 P0ACI0 68 81 rob Right origin-binding protein yes yes 3 1.6561E-09 83.499 By MS/MS By MS/MS By MS/MS 1 1 1 25186000 5657200 0 0 0 8973200 10556000 0 0 3023 211 3263 17781;17782;17783 13426;13427;13428 13428 3 5657200 0 0 0 10824000 11693000 0 0 LTDILAAGLQQK HGPVGLKRIANRIHRLTDILAAGLQQKGLK IHRLTDILAAGLQQKGLKLRHAHYFDTLCV R L T Q K G 2 0 0 1 0 2 0 1 0 1 3 1 0 0 0 0 1 0 0 0 0 0 12 0 0 2 1269.7293 P33195 P33195 367 378 gcvP Glycine dehydrogenase (decarboxylating) yes yes 2 0.0021161 60.828 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 16164000 4264900 3562600 0 0 4026800 4309500 0 0 3024 344 3264 17784;17785;17786;17787 13429;13430;13431 13431 3 4264900 3646700 0 0 4857600 4774000 0 0 LTDTPAIVSTDADEMSTQMAK ALLGERVKDVRLTHRLTDTPAIVSTDADEM IVSTDADEMSTQMAKLFAAAGQKVPEVKYI R L T A K L 3 0 0 3 0 1 1 0 0 1 1 1 2 0 1 2 4 0 0 1 0 0 21 0 1 4 2224.0239 P0A6Z3 P0A6Z3 532 552 htpG Chaperone protein HtpG yes yes 2 5.1964E-198 226.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 134030000 45005000 33355000 0 0 25461000 30211000 0 0 3025 88 3265 17788;17789;17790;17791;17792 13432;13433;13434;13435;13436;13437 13437 6 45005000 34143000 0 0 30713000 33756000 0 0 LTEALNPNDKG RRALNNELQQEVHQRLTEALNPNDKG____ VHQRLTEALNPNDKG_______________ R L T K G - 1 0 2 1 0 0 1 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 11 1 1 2 1170.5881 P27249 P27249 880 890 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 2.9455E-64 200.05 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 146010000 47148000 43210000 0 0 28309000 27348000 0 0 3026 320 3266 17793;17794;17795;17796 13438;13439;13440;13441 13438 4 47148000 44230000 0 0 34149000 30296000 0 0 LTELETGRADA SMGLGIMGGGSLEEALTELETGRADAVVVL LEEALTELETGRADAVVVLENDLHRHASAI A L T D A V 2 1 0 1 0 0 2 1 0 0 2 0 0 0 0 0 2 0 0 0 0 0 11 1 2 1 1174.583 P33602 P33602 553 563 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.3055E-10 110.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18514000 1909300 1802700 0 0 10151000 4651500 0 0 3027 345 3267 17797;17798;17799;17800 13442;13443;13444 13444 3 11525000 10789000 0 0 14451000 6630700 0 0 LTGLEHEK TEQQAQAILDLRLQKLTGLEHEKLLDEYKE LDLRLQKLTGLEHEKLLDEYKELLDQIAEL K L T E K L 0 0 0 0 0 0 2 1 1 0 2 1 0 0 0 0 1 0 0 0 0 0 8 0 2 0 925.4869 P0AES4 P0AES4 466 473 gyrA DNA gyrase subunit A yes yes 2 0.022051 45.081 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5667700 1747600 1822900 0 0 1069700 1027500 0 0 3028 238 3268 17801;17802;17803;17804 13445 13445 1 1747600 1865900 0 0 1290400 1138200 0 0 LTGLEPGELFVHR FLWIGCSDSRVPAERLTGLEPGELFVHRNV ERLTGLEPGELFVHRNVANLVIHTDLNCLS R L T H R N 0 1 0 0 0 0 2 2 1 0 3 0 0 1 1 0 1 0 0 1 0 0 13 0 2 1 1466.7882 P61517 P61517 52 64 can Carbonic anhydrase 2 yes yes 2;3 3.7087E-101 193.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2991100000 708730000 619070000 0 0 692230000 971040000 0 0 3029 386 3269 17805;17806;17807;17808;17809;17810;17811;17812 13446;13447;13448;13449;13450;13451;13452;13453 13452 8 708730000 633680000 0 0 835040000 1075700000 0 0 LTGMAFR AAKAVGKVLPELNGKLTGMAFRVPTPNVSV VLPELNGKLTGMAFRVPTPNVSVVDLTVRL K L T F R V 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 0 1 794.41089 P0A9B2 P0A9B2 226 232 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 0.002735 77.748 By MS/MS By MS/MS By MS/MS 1 1 1 13357000 4704200 0 0 0 4279200 4373600 0 0 3030 163 3270 17813;17814;17815 13454;13455 13455 2 4704200 0 0 0 5162000 4845000 0 0 LTGRDPDFHR PLAGKASLVWDEAQKLTGRDPDFHRRELWE DEAQKLTGRDPDFHRRELWEAIEAGDFPEY K L T H R R 0 2 0 2 0 0 0 1 1 0 1 0 0 1 1 0 1 0 0 0 0 0 10 1 0 1 1212.6 P21179 P21179 310 319 katE Catalase HPII yes yes 3 0.00026074 67.153 By MS/MS 1 10247000 0 10247000 0 0 0 0 0 0 3031 293 3271 17816 13456 13456 1 0 10489000 0 0 0 0 0 0 LTGRDPDFHRR PLAGKASLVWDEAQKLTGRDPDFHRRELWE EAQKLTGRDPDFHRRELWEAIEAGDFPEYE K L T R R E 0 3 0 2 0 0 0 1 1 0 1 0 0 1 1 0 1 0 0 0 0 0 11 2 0 1 1368.7011 P21179 P21179 310 320 katE Catalase HPII yes yes 3 0.0087841 39.917 By MS/MS By MS/MS 1 1 2953700 1144000 1809700 0 0 0 0 0 0 3032 293 3272 17817;17818 13457;13458 13458 2 1144000 1852400 0 0 0 0 0 0 LTISEGR TKPAVLEVITPTQVRLTISEGRYHQVKRMF VITPTQVRLTISEGRYHQVKRMFAAVGNHV R L T G R Y 0 1 0 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 7 0 1 0 774.42357 P0AA43 P0AA43 176 182 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 8.215E-18 143.37 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 1315000000 389560000 417420000 1283800 1957800 239800000 258130000 6827200 0 3033 183 3273 17819;17820;17821;17822;17823;17824;17825;17826;17827 13459;13460;13461;13462 13460 4 469000000 487040000 10908000 14843000 289270000 285950000 52544000 0 LTKPVELIATLDDSAK LDTNMKTQLKAYLEKLTKPVELIATLDDSA TKPVELIATLDDSAKSAEIKELLAEIAELS K L T A K S 2 0 0 2 0 0 1 0 0 1 3 2 0 0 1 1 2 0 0 1 0 0 16 1 1 3 1712.956 P35340 P35340 17 32 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 4.487E-98 228.93 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2399200000 546110000 487790000 0 0 542690000 822620000 0 0 3034 348 3274 17828;17829;17830;17831;17832;17833;17834;17835 13463;13464;13465;13466;13467;13468;13469;13470 13468 8 546110000 499300000 0 0 654650000 911280000 0 0 LTLTKADLE SVEADINGLRRVLDELTLTKADLEMQIESL RRVLDELTLTKADLEMQIESLTEELAYLKK E L T L E M 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 9 1 0 1 1002.5597 CON__P13645 CON__P13645 262 270 yes yes 2 0.00028024 82.452 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 116690000 14825000 9209600 11991000 11468000 5891800 5725200 22588000 34990000 + 3035 12 3275 17836;17837;17838;17839;17840;17841;17842;17843 13471;13472;13473 13471 2 227790000 140450000 101890000 86945000 90710000 86774000 173840000 200800000 LTLTYAETR ERRLAYVGVTRAMQKLTLTYAETRRLYGKE TRAMQKLTLTYAETRRLYGKEVYHRPSRFI K L T T R R 1 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 3 0 1 0 0 0 9 0 1 1 1066.5659 P03018 P03018 610 618 uvrD DNA helicase II yes yes 2 0.0031574 64.711 By matching By matching By matching By MS/MS 1 1 1 1 16721000 4862700 4083300 0 0 3387500 4387200 0 0 3036 41 3276 17844;17845;17846;17847 13474 13474 1 4862700 4179700 0 0 4086400 4860000 0 0 LTNDDGTMARAPE LMTLAGFKPAGVLCELTNDDGTMARAPECI CELTNDDGTMARAPECIEFANKHNMALVTI E L T P E C 2 1 1 2 0 0 1 1 0 0 1 0 1 0 1 0 2 0 0 0 0 0 13 1 0 3 1389.6194 P0A7J0 P0A7J0 175 187 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 3.6817E-32 167.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 2 2 243750000 27602000 24325000 36936000 40092000 17590000 19919000 33395000 43891000 3037 105 3277;3278 17848;17849;17850;17851;17852;17853;17854;17855;17856;17857;17858;17859;17860;17861;17862;17863;17864;17865 13475;13476;13477;13478;13479;13480;13481;13482;13483;13484;13485;13486;13487;13488;13489;13490;13491;13492 13484 115 18 421240000 370960000 313840000 303960000 230930000 301900000 257010000 251890000 LTNDDGTMARAPECIE LMTLAGFKPAGVLCELTNDDGTMARAPECI TNDDGTMARAPECIEFANKHNMALVTIEDL E L T I E F 2 1 1 2 1 0 2 1 0 1 1 0 1 0 1 0 2 0 0 0 0 0 16 1 1 3 1791.7767 P0A7J0 P0A7J0 175 190 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 8.0823E-24 128.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 2 1 2 115630000 10798000 9158900 32146000 26711000 1705100 6756000 4765300 23590000 3038 105 3279;3280 17866;17867;17868;17869;17870;17871;17872;17873;17874;17875;17876;17877;17878;17879 13493;13494;13495;13496;13497;13498;13499 13493 115 7 165920000 139670000 273140000 202510000 26251000 102400000 36675000 135380000 LTNHSLYLYGHCAEGDCREDEHAHEGK IEARQREIAAKHGIRLTNHSLYLYGHCAEG AEGDCREDEHAHEGK_______________ R L T G K - 2 1 1 2 2 0 4 3 4 0 3 1 0 0 0 1 1 0 2 0 0 0 27 1 4 2 3197.3679 P0A9A9 P0A9A9 122 148 fur Ferric uptake regulation protein yes yes 4;5;6 1.0208E-58 130.01 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 131860000 30656000 32031000 0 0 31324000 37850000 0 0 3039 162 3281 17880;17881;17882;17883;17884;17885;17886;17887;17888 13500;13501;13502;13503;13504;13505;13506;13507;13508;13509;13510 13509 11 30656000 32787000 0 0 37786000 41930000 0 0 LTQQHHHDHLICLDCGKVIE IVTRHNFEGGKSVFELTQQHHHDHLICLDC HHDHLICLDCGKVIEFSDDSIEARQREIAA E L T I E F 0 0 0 2 2 2 1 1 4 2 3 1 0 0 0 0 1 0 0 1 0 0 20 1 0 0 2452.174 P0A9A9 P0A9A9 82 101 fur Ferric uptake regulation protein yes yes 4 0.0004137 33.142 By MS/MS By MS/MS 1 1 26554000 0 0 0 0 14669000 11885000 0 0 3040 162 3282 17889;17890 13511;13512 13512 2 0 0 0 0 225840000 180140000 0 0 LTQSMAIIR LEFPNLPYYIDGDVKLTQSMAIIRYIADKH IDGDVKLTQSMAIIRYIADKHNMLGGCPKE K L T I R Y 1 1 0 0 0 1 0 0 0 2 1 0 1 0 0 1 1 0 0 0 0 0 9 0 0 1 1031.5798 GST-Nek6 GST-Nek6 65 73 yes yes 2 7.7996E-75 182.39 By MS/MS By MS/MS 3 4 1150700000 0 0 0 0 484560000 666120000 0 0 3041 23 3283;3284;3285;3286 17891;17892;17893;17894;17895;17896;17897 13513;13514;13515;13516;13517;13518 13515 35 7 4 0 0 0 0 584520000 737920000 0 0 LTRESFRLR KKNVRRAHERNRIKRLTRESFRLRQHELPA RNRIKRLTRESFRLRQHELPAMDFVVVAKK R L T L R Q 0 3 0 0 0 0 1 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 9 2 1 0 1176.6727 P0A7Y8 P0A7Y8 68 76 rnpA Ribonuclease P protein component yes yes 2 0.0010424 57.103 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 3 0 0 0 0 0 0 0 0 0 3042 134 3287 17898;17899;17900;17901;17902;17903;17904;17905;17906 13519;13520;13521;13522;13523;13524 13523 17 0 0 0 0 0 0 0 0 0 LTTDITLPSR MVQVVKDPLGTKGARLTTDITLPSRYLVFM TKGARLTTDITLPSRYLVFMPGASHVGVSQ R L T S R Y 0 1 0 1 0 0 0 0 0 1 2 0 0 0 1 1 3 0 0 0 0 0 10 0 0 1 1115.6186 P0A9J0 P0A9J0 119 128 rng Ribonuclease G yes yes 2 0.00032643 89.08 By MS/MS By MS/MS By matching By matching 1 1 1 1 24721000 8689100 6689500 0 0 5005500 4337100 0 0 3043 165 3288 17907;17908;17909;17910 13525;13526 13526 2 8689100 6847400 0 0 6038100 4804500 0 0 LTVDELHPPIPGYECPPNHQLVEVVEK LNDALAPVSERWPGRLTVDELHPPIPGYEC YECPPNHQLVEVVEKLLGAKTEVVNYCTEA R L T E K L 0 0 1 1 1 1 4 1 2 1 3 1 0 0 5 0 1 0 1 4 0 0 27 0 4 5 3108.559 P23908 P23908 293 319 argE Acetylornithine deacetylase yes yes 3;4 7.8997E-34 106.11 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 284800000 50217000 55827000 0 0 91104000 87656000 0 0 3044 308 3289 17911;17912;17913;17914;17915;17916;17917;17918 13527;13528;13529;13530;13531;13532;13533;13534;13535;13536 13534 10 50217000 57145000 0 0 109900000 97103000 0 0 LTVHHIDHDHTNNPE CGRCSREFVYSNLRELTVHHIDHDHTNNPE LTVHHIDHDHTNNPEDGSNWELLCLYCHDH E L T P E D 0 0 2 2 0 0 1 0 4 1 1 0 0 0 1 0 2 0 0 1 0 0 15 0 0 1 1777.8132 P0AAQ2 P0AAQ2 42 56 yajD Uncharacterized protein YajD yes yes 3 0.0085608 31.827 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 28173000 4419100 6222400 2841000 2900800 1799300 2119600 4133900 3736900 3045 188 3290 17919;17920;17921;17922;17923;17924;17925;17926 13537 13537 1 67898000 94892000 24139000 21993000 27702000 32125000 31815000 21445000 LTVHHIDHDHTNNPEDGSNWE CGRCSREFVYSNLRELTVHHIDHDHTNNPE DHDHTNNPEDGSNWELLCLYCHDHEHSKYT E L T W E L 0 0 3 3 0 0 2 1 4 1 1 0 0 0 1 1 2 1 0 1 0 0 21 0 1 1 2466.0585 P0AAQ2 P0AAQ2 42 62 yajD Uncharacterized protein YajD yes yes 3;4 5.4295E-31 99.891 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 2 2 472560000 32391000 53543000 106180000 145100000 20874000 10338000 55004000 49134000 3046 188 3291 17927;17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940;17941 13538;13539;13540;13541;13542;13543;13544;13545;13546;13547 13540 10 497680000 816540000 902160000 1100100000 321370000 156690000 423320000 281970000 LTVSETTFGRDFNEA ______________________________ LTVSETTFGRDFNEALVHQVVVAYAAGARQ A L T E A L 1 1 1 1 0 0 2 1 0 0 1 0 0 2 0 1 3 0 0 1 0 0 15 1 2 0 1685.7897 P60723 P60723 12 26 rplD 50S ribosomal protein L4 yes yes 2 1.0169E-05 73.951 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33898000 2282000 2816400 0 0 18353000 10446000 0 0 3047 383 3292 17942;17943;17944;17945 13548;13549;13550;13551 13550 4 13775000 16856000 0 0 26130000 14891000 0 0 LVAAIDGIDR ENYDGTTGSFADLLRLVAAIDGIDRIRFTT ADLLRLVAAIDGIDRIRFTTSHPIEFTDDI R L V D R I 2 1 0 2 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 10 0 0 2 1041.5819 P0AEI1 P0AEI1 224 233 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.0045793 53.493 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36710000 11570000 7723200 0 0 6987200 10429000 0 0 3048 237 3293 17946;17947;17948;17949 13552 13552 1 11570000 7905500 0 0 8428600 11553000 0 0 LVADLIR IAKHRHARSSAQKVRLVADLIRGKKVSQAL RSSAQKVRLVADLIRGKKVSQALDILTYTN R L V I R G 1 1 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 7 0 0 1 798.49634 P61175 P61175 19 25 rplV 50S ribosomal protein L22 yes yes 2 3.1479E-45 167.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 1 1 1 991510000 68688000 65544000 351940000 369320000 59296000 73497000 3225900 0 3049 385 3294 17950;17951;17952;17953;17954;17955;17956;17957;17958 13553;13554;13555;13556;13557 13553 5 107790000 90017000 2990400000 2800000000 71528000 81418000 24828000 0 LVADSITSQLER QINIAEVRKPELDAKLVADSITSQLERRVM DAKLVADSITSQLERRVMFRRAMKRAVQNA K L V E R R 1 1 0 1 0 1 1 0 0 1 2 0 0 0 0 2 1 0 0 1 0 0 12 0 1 1 1330.7092 P0A7V3 P0A7V3 115 126 rpsC 30S ribosomal protein S3 yes yes 2 2.8298E-138 211.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 322240000 99662000 71040000 0 0 75106000 76435000 0 0 3050 129 3295 17959;17960;17961;17962 13558;13559;13560;13561 13558 4 99662000 72717000 0 0 90600000 84673000 0 0 LVASYQAGR ______________________________ RPDFEKLVASYQAGRGHHALLIQALPGMGD K L V G R G 2 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 0 2 963.51378 P28631 P28631 14 22 holB DNA polymerase III subunit delta yes yes 2 0.00048935 61.962 By MS/MS 1 0 0 0 0 0 0 0 0 0 3051 325 3296 17963 13562 13562 1 0 0 0 0 0 0 0 0 LVAVGNTFVYPIAGYSK HKPYLDQQLKDRGYKLVAVGNTFVYPIAGY AVGNTFVYPIAGYSKKIKSLDELQDGSQVA K L V S K K 2 0 1 0 0 0 0 2 0 1 1 1 0 1 1 1 1 0 2 3 0 0 17 0 0 3 1797.9665 P28635 P28635 103 119 metQ D-methionine-binding lipoprotein MetQ yes yes 2 0.0015053 62.924 By matching By matching By MS/MS 1 1 1 8404100 2636800 2257500 0 0 0 3509800 0 0 3052 326 3297 17964;17965;17966 13563 13563 1 2636800 2310800 0 0 0 3888000 0 0 LVDIEQVSSTHAK ______________________________ PRLVDIEQVSSTHAKVTLEPLERGFGHTLG R L V A K V 1 0 0 1 0 1 1 0 1 1 1 1 0 0 0 2 1 0 0 2 0 0 13 0 1 1 1425.7464 P0A7Z4 P0A7Z4 13 25 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2;3 6.3549E-20 126.34 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 82784000 22190000 17500000 0 0 21562000 21533000 0 0 3053 135 3298 17967;17968;17969;17970;17971;17972;17973;17974 13564;13565;13566;13567;13568 13568 4 22190000 17913000 0 0 26010000 23854000 0 0 LVDIVEPTEK NKDARDQYEIRTHLRLVDIVEPTEKTVDAL RTHLRLVDIVEPTEKTVDALMRLDLAAGVD R L V E K T 0 0 0 1 0 0 2 0 0 1 1 1 0 0 1 0 1 0 0 2 0 0 10 0 2 1 1141.6231 P0A7R5 P0A7R5 73 82 rpsJ 30S ribosomal protein S10 yes yes 2 2.0993E-20 135.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 475410000 149330000 114290000 0 0 88776000 123010000 0 0 3054 120 3299 17975;17976;17977;17978 13569;13570;13571;13572 13571 4 149330000 116990000 0 0 107090000 136270000 0 0 LVDLGVKE EFQILYGEGINFYGELVDLGVKEKLIEKAG GINFYGELVDLGVKEKLIEKAGAWYSYKGE E L V K E K 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 0 2 0 0 8 1 0 0 871.50148 P0A7G6 P0A7G6 275 282 recA Protein RecA yes yes 2 0.0080822 56.721 By MS/MS 1 0 0 0 0 0 0 0 0 0 3055 104 3300 17979 13573 13573 1 0 0 0 0 0 0 0 0 LVELMPQSR SPEIARATAVAIHGKLVELMPQSRAKLDAN VAIHGKLVELMPQSRAKLDANLKDFEAQLA K L V S R A 0 1 0 0 0 1 1 0 0 0 2 0 1 0 1 1 0 0 0 1 0 0 9 0 1 1 1071.5747 P39172 P39172 162 170 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 3.3853E-19 135.83 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 382380000 88665000 90355000 0 3438400 80677000 119240000 0 0 3056 361 3301;3302 17980;17981;17982;17983;17984;17985 13574;13575;13576;13577;13578;13579 13578 292 6 88665000 92488000 0 26069000 97321000 132090000 0 0 LVEVAHRLA DSKADMLMFGNGERPLVEVAHRLAMGEPIS GNGERPLVEVAHRLAMGEPISEIRDVRNTA P L V L A M 2 1 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 2 0 0 9 1 1 1 1006.5924 Q46861 Q46861 201 209 ygiQ UPF0313 protein YgiQ yes yes 2 0.01905 58.917 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 5086500 330950 358880 0 0 2075700 2320900 0 0 3057 441 3303 17986;17987;17988;17989 13580 13580 1 1997800 2147900 0 0 2955200 3308500 0 0 LVFLAHSQPEYR GLTRGALLDYHSRYKLVFLAHSQPEYRKLG RYKLVFLAHSQPEYRKLGPFVADIHQWQNL K L V Y R K 1 1 0 0 0 1 1 0 1 0 2 0 0 1 1 1 0 0 1 1 0 0 12 0 1 2 1458.7619 P24252 P24252 42 53 ybgA Uncharacterized protein YbgA yes yes 2;3 8.409E-120 242.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 684680000 175300000 132740000 0 0 179420000 197210000 0 0 3058 313 3304 17990;17991;17992;17993;17994;17995;17996;17997 13581;13582;13583;13584;13585;13586;13587;13588 13586 8 175300000 135880000 0 0 216440000 218470000 0 0 LVGEMFVYHMPFNR ______________________________ KLVGEMFVYHMPFNRALGMELERYEKEFAQ K L V N R A 0 1 1 0 0 0 1 1 1 0 1 0 2 2 1 0 0 0 1 2 0 0 14 0 1 1 1738.8324 P0ADP2 P0ADP2 13 26 yigI Uncharacterized protein YigI yes yes 3 0.018807 26.124 By MS/MS 1 4825700 0 0 0 0 0 4825700 0 0 3059 224 3305 17998 13589 13589 1 0 0 0 0 0 5345800 0 0 LVGPLIDVMGSAGEDLKR RHGNMLGAKETFFYKLVGPLIDVMGSAGED PLIDVMGSAGEDLKRQQAQVEQVLKTEEEQ K L V K R Q 1 1 0 2 0 0 1 3 0 1 3 1 1 0 1 1 0 0 0 2 0 0 18 1 1 2 1869.003 P00957 P00957 334 351 alaS Alanine--tRNA ligase yes yes 3 7.0139E-27 109.35 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 18007000 2055500 2562400 0 0 6176600 7213000 0 0 3060 33 3306 17999;18000;18001;18002;18003;18004 13590;13591;13592;13593 13592 4 2055500 2622800 0 0 7450800 7990400 0 0 LVGSSHLLTDPAK MTTTDNKAFLNELARLVGSSHLLTDPAKTA ARLVGSSHLLTDPAKTARYRKGFRSGQGDA R L V A K T 1 0 0 1 0 0 0 1 1 0 3 1 0 0 1 2 1 0 0 1 0 0 13 0 0 2 1336.7351 P06149 P06149 19 31 dld D-lactate dehydrogenase yes yes 3 0.0051936 31.215 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 11702000 4085800 4126800 0 0 3489000 0 0 0 3061 50 3307 18005;18006;18007;18008 13594;13595;13596 13596 3 4085800 4224200 0 0 4208800 0 0 0 LVHIPEEELLPGLEK LASTFLRGYIRSYARLVHIPEEELLPGLEK LVHIPEEELLPGLEKQAPLRAAKVAPMQSF R L V E K Q 0 0 0 0 0 0 4 1 1 1 4 1 0 0 2 0 0 0 0 1 0 0 15 0 4 2 1714.9505 P27434 P27434 71 85 rodZ Cytoskeleton protein RodZ yes yes 3 0.0017416 43.184 By matching By MS/MS By matching By MS/MS 1 1 1 1 33986000 9089100 6831400 0 0 8483000 9582800 0 0 3062 324 3308 18009;18010;18011;18012 13597 13597 1 9089100 6992600 0 0 10233000 10616000 0 0 LVILDILSR GGGRRQRFFGHGELRLVILDILSRDDSHGY GHGELRLVILDILSRDDSHGYELIKAIENL R L V S R D 0 1 0 1 0 0 0 0 0 2 3 0 0 0 0 1 0 0 0 1 0 0 9 0 0 0 1040.6594 P64588 P64588 65 73 yqjI Transcriptional regulator YqjI yes yes 2 2.8505E-91 194.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1675100000 511400000 331500000 0 0 446140000 386030000 0 0 3063 398 3309 18013;18014;18015;18016 13598;13599;13600;13601 13600 4 511400000 339330000 0 0 538180000 427640000 0 0 LVISIAK KARRAKKEMVEANLRLVISIAKKYTNRGLQ EMVEANLRLVISIAKKYTNRGLQFLDLIQE R L V A K K 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 7 0 0 1 742.49528 P00579 P00579 386 392 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0015419 100.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 268190000 84593000 73130000 0 0 44523000 65940000 0 0 3064 27 3310 18017;18018;18019;18020 13602;13603;13604;13605 13602 4 84593000 74856000 0 0 53708000 73047000 0 0 LVITPVDGSDPYEEMIPK SGIVSFGKETKGKRRLVITPVDGSDPYEEM TPVDGSDPYEEMIPKWRQLNVFEGERVERG R L V P K W 0 0 0 2 0 0 2 1 0 2 1 1 1 0 3 1 1 0 1 2 0 0 18 0 2 3 2001.9969 P0A8T7 P0A8T7 1175 1192 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.9238E-17 95.018 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37404000 10023000 10179000 0 0 6570000 10632000 0 0 3065 153 3311 18021;18022;18023;18024 13606;13607;13608;13609 13606 4 10023000 10419000 0 0 7925400 11777000 0 0 LVKQQGYVSTE ______________________________ GIIELVKQQGYVSTEELVEHFSVSPQTIRR E L V T E E 0 0 0 0 0 2 1 1 0 0 1 1 0 0 0 1 1 0 1 2 0 0 11 1 0 0 1250.6507 P0ACL0 P0ACL0 13 23 glpR Glycerol-3-phosphate regulon repressor yes yes 2 6.9172E-05 93.374 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 42981000 7711400 6745500 6157500 7289700 931010 1133100 5207400 7805100 3066 215 3312 18025;18026;18027;18028;18029;18030;18031;18032 13610;13611;13612 13610 3 118480000 102870000 52319000 55267000 14334000 17174000 40077000 44792000 LVKQQGYVSTEE ______________________________ IIELVKQQGYVSTEELVEHFSVSPQTIRRD E L V E E L 0 0 0 0 0 2 2 1 0 0 1 1 0 0 0 1 1 0 1 2 0 0 12 1 1 0 1379.6933 P0ACL0 P0ACL0 13 24 glpR Glycerol-3-phosphate regulon repressor yes yes 2 6.9547E-97 191.17 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1387500000 196720000 236840000 169820000 212780000 75263000 59974000 188260000 247890000 3067 215 3313 18033;18034;18035;18036;18037;18038;18039;18040 13613;13614;13615;13616;13617;13618;13619 13613 7 3022500000 3611800000 1443000000 1613200000 1158700000 908990000 1448900000 1422600000 LVKQQGYVSTEELVE ______________________________ LVKQQGYVSTEELVEHFSVSPQTIRRDLNE E L V V E H 0 0 0 0 0 2 3 1 0 0 2 1 0 0 0 1 1 0 1 3 0 0 15 1 2 0 1720.8883 P0ACL0 P0ACL0 13 27 glpR Glycerol-3-phosphate regulon repressor yes yes 2 0.0017773 59.426 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 215180000 0 0 32206000 33470000 11192000 11554000 41611000 85145000 3068 215 3314 18041;18042;18043;18044;18045;18046 13620;13621;13622 13621 3 0 0 273650000 253760000 172310000 175120000 320250000 488630000 LVLKDAQSALTVSE ______________________________ ELVLKDAQSALTVSETTFGRDFNEALVHQV E L V S E T 2 0 0 1 0 1 1 0 0 0 3 1 0 0 0 2 1 0 0 2 0 0 14 1 0 2 1472.8086 P60723 P60723 3 16 rplD 50S ribosomal protein L4 yes yes 2 7.5641E-24 125.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 49944000 8008200 8377300 0 0 13493000 9644500 4647600 5772900 3069 383 3315 18047;18048;18049;18050;18051;18052 13623;13624;13625;13626 13626 4 123040000 127750000 0 0 207740000 146180000 35769000 33130000 LVLNRDLVL QQAGNGIFARQALLALVLNRDLVL______ RQALLALVLNRDLVL_______________ A L V V L - 0 1 1 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2 0 0 9 1 0 0 1053.6546 P0A786 P0A786 303 311 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.018501 60.436 By MS/MS By MS/MS 1 1 3298000 0 0 0 0 1165000 2133000 0 0 3070 97 3316 18053;18054 13627 13627 1 0 0 0 0 1658600 3040600 0 0 LVLYKDGERRYILAP VERLEYDPNRSANIALVLYKDGERRYILAP LVLYKDGERRYILAPKGLKAGDQIQSGVDA A L V A P K 1 2 0 1 0 0 1 1 0 1 3 1 0 0 1 0 0 0 2 1 0 0 15 3 1 1 1805.02 P60422 P60422 93 107 rplB 50S ribosomal protein L2 yes yes 3 0.0029789 37.55 By MS/MS By MS/MS By matching 1 1 1 7097600 0 0 0 0 1517800 4687300 892570 0 3071 379 3317 18055;18056;18057 13628;13629;13630 13629 3 0 0 0 0 2160800 6681700 6869500 0 LVMVVDHQRTA HASAIRVNAALAKAPLVMVVDHQRTAIMEN AKAPLVMVVDHQRTAIMENAHLVLSAASFA P L V T A I 1 1 0 1 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 3 0 0 11 1 0 0 1267.6707 P33602 P33602 589 599 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 5.3804E-10 103.34 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 72926000 6110900 3079200 0 0 21092000 42643000 0 0 3072 345 3318;3319 18058;18059;18060;18061;18062;18063;18064;18065;18066;18067 13631;13632;13633;13634;13635;13636 13633 275 6 36889000 18429000 0 0 30029000 60788000 0 0 LVNPEELK IKDAMKLLIEEEAAKLVNPEELKQDAIDAV IEEEAAKLVNPEELKQDAIDAVEQHGIVFI K L V L K Q 0 0 1 0 0 0 2 0 0 0 2 1 0 0 1 0 0 0 0 1 0 0 8 0 2 1 940.52295 P0A6H5 P0A6H5 233 240 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.00068309 100.39 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43392000 12973000 9780300 0 0 9960400 10678000 0 0 3073 71 3320 18068;18069;18070;18071 13637;13638;13639;13640 13637 4 12973000 10011000 0 0 12015000 11829000 0 0 LVPEHDPVHK ESTAYHEAGHAIIGRLVPEHDPVHKVTIIP AIIGRLVPEHDPVHKVTIIPRGRALGVTFF R L V H K V 0 0 0 1 0 0 1 0 2 0 1 1 0 0 2 0 0 0 0 2 0 0 10 0 1 2 1169.6193 P0AAI3 P0AAI3 424 433 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 3 4.2368E-05 61.65 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 3074 185 3321 18072;18073;18074 13641;13642;13643 13642 3 0 0 0 0 0 0 0 0 LVPIIADEAR RALNVMLKNKSIKDRLVPIIADEARTFGME SIKDRLVPIIADEARTFGMEGLFRQIGIYS R L V A R T 2 1 0 1 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 10 0 1 3 1095.6288 P0AFG8 P0AFG8 516 525 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0040479 54.982 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22743000 5837000 5935500 0 0 5099900 5870900 0 0 3075 248 3322 18075;18076;18077;18078 13644;13645 13644 2 5837000 6075600 0 0 6152000 6503600 0 0 LVQSGKSE TKTEELNREVATNSELVQSGKSEISELRRT EVATNSELVQSGKSEISELRRTMQNLEIEL E L V S E I 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 8 1 0 0 846.4447 CON__P02533 CON__P02533 323 330 no no 2 0.01828 58.981 By MS/MS By MS/MS 1 1 4299200 0 0 0 0 0 0 3427100 872110 + 3076 4 3323 18079;18080 13646;13647 13646 2 0 0 0 0 0 0 26376000 5004900 LVQTRNQGDHLLHSTRKQVE RDAEANAEADRKFEELVQTRNQGDHLLHST NQGDHLLHSTRKQVEEAGDKLPADDKTAIE E L V V E E 0 2 1 1 0 3 1 1 2 0 3 1 0 0 0 1 2 0 0 2 0 0 20 3 0 0 2358.2516 P0A6Y8 P0A6Y8 532 551 dnaK Chaperone protein DnaK yes yes 4;5 2.4524E-09 67.727 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 145880000 16495000 15994000 16685000 28633000 12018000 12738000 17872000 25445000 3077 86 3324 18081;18082;18083;18084;18085;18086;18087;18088;18089;18090;18091;18092;18093;18094;18095;18096 13648;13649;13650;13651;13652;13653;13654;13655;13656;13657;13658;13659;13660;13661;13662;13663 13661 16 253450000 243920000 141770000 217080000 185030000 193070000 137550000 146030000 LVQTRNQGDHLLHSTRKQVEE RDAEANAEADRKFEELVQTRNQGDHLLHST QGDHLLHSTRKQVEEAGDKLPADDKTAIES E L V E E A 0 2 1 1 0 3 2 1 2 0 3 1 0 0 0 1 2 0 0 2 0 0 21 3 1 0 2487.2942 P0A6Y8 P0A6Y8 532 552 dnaK Chaperone protein DnaK yes yes 3;4;5;6 1.1576E-51 126.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 4 3 4 2 3 2517300000 377810000 254630000 354190000 470260000 183910000 165110000 346330000 365070000 3078 86 3325 18097;18098;18099;18100;18101;18102;18103;18104;18105;18106;18107;18108;18109;18110;18111;18112;18113;18114;18115;18116;18117;18118;18119;18120;18121;18122;18123 13664;13665;13666;13667;13668;13669;13670;13671;13672;13673;13674;13675;13676;13677;13678;13679;13680;13681;13682;13683;13684;13685;13686;13687;13688;13689 13674 26 5804900000 3883200000 3009500000 3565300000 2831400000 2502500000 2665400000 2095100000 LVSDLVQTTPHGEYR ADVGFGGQTLTAPIRLVSDLVQTTPHGEYR LVSDLVQTTPHGEYRLLQEGDDWVLQFNHH R L V Y R L 0 1 0 1 0 1 1 1 1 0 2 0 0 0 1 1 2 0 1 2 0 0 15 0 1 1 1713.8686 P77567 P77567 136 150 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2;3 1.9178E-126 204.49 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 532460000 143330000 131250000 0 0 105720000 152170000 0 0 3079 436 3326 18124;18125;18126;18127;18128;18129;18130;18131 13690;13691;13692;13693;13694;13695;13696;13697 13691 8 143330000 134350000 0 0 127530000 168570000 0 0 LVSEYNATQK TNASAPALAGEALEKLVSEYNATQKMINRM EALEKLVSEYNATQKMINRMERRYPKAMLK K L V Q K M 1 0 1 0 0 1 1 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 10 0 1 1 1151.5823 P0AES6 P0AES6 583 592 gyrB DNA gyrase subunit B yes yes 2 0.00014722 96.331 By MS/MS By matching By MS/MS 2 1 1 78466000 25237000 27975000 0 0 25254000 0 0 0 3080 239 3327 18132;18133;18134;18135 13698 13698 1 26617000 28635000 0 0 30463000 0 0 0 LVSNLRKE MGNWKLNGSRHMVHELVSNLRKELAGVAGC SRHMVHELVSNLRKELAGVAGCAVAIAPPE E L V K E L 0 1 1 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 8 2 0 0 957.56073 P0A858 P0A858 22 29 tpiA Triosephosphate isomerase yes yes 2 0.0039391 77.058 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1210100000 6545100 1159400000 17980000 17599000 4627100 3949800 0 0 3081 139 3328 18136;18137;18138;18139;18140;18141;18142 13699;13700;13701 13700 3 100560000 1278900000 152770000 133430000 71239000 59865000 0 0 LVSSEVK VKVPDPKFSSQTKDKLVSSEVKSAVEQQMN FSSQTKDKLVSSEVKSAVEQQMNELLAEYL K L V V K S 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 2 0 0 7 0 1 0 760.43307 P0AES6 P0AES6 340 346 gyrB DNA gyrase subunit B yes yes 2 0.0065819 60.358 By MS/MS By MS/MS By matching By matching 1 1 1 1 21192000 6737700 6850900 0 0 4074700 3528800 0 0 3082 239 3329 18143;18144;18145;18146 13702;13703 13702 2 6737700 7012600 0 0 4915400 3909200 0 0 LVTIDNIQK FVREALRDLLALQEKLVTIDNIQKTVAEYY LALQEKLVTIDNIQKTVAEYYKIKVADLLS K L V Q K T 0 0 1 1 0 1 0 0 0 2 1 1 0 0 0 0 1 0 0 1 0 0 9 0 0 0 1042.6023 P03004 P03004 373 381 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.021079 43.772 By matching By MS/MS 1 1 9330800 0 3078900 0 0 0 6252000 0 0 3083 40 3330 18147;18148 13704 13704 1 0 3151500 0 0 0 6925800 0 0 LVTIEDLVAYRQA RAPECIEFANKHNMALVTIEDLVAYRQAHE MALVTIEDLVAYRQAHERKAS_________ A L V Q A H 2 1 0 1 0 1 1 0 0 1 2 0 0 0 0 0 1 0 1 2 0 0 13 1 1 1 1489.814 P0A7J0 P0A7J0 199 211 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 1.445E-31 144.77 By MS/MS By MS/MS 1 1 13216000 0 0 0 0 4236700 8979000 0 0 3084 105 3331 18149;18150 13705;13706 13706 2 0 0 0 0 6031700 12799000 0 0 LVTQIFHKTE EDKPALATYNLKDCELVTQIFHKTEIMPFL LKDCELVTQIFHKTEIMPFLLERATVNGLP E L V T E I 0 0 0 0 0 1 1 0 1 1 1 1 0 1 0 0 2 0 0 1 0 0 10 1 0 0 1214.6659 P21189 P21189 338 347 polB DNA polymerase II yes yes 2 0.003731 45.952 By MS/MS 1 0 0 0 0 0 0 0 0 0 3085 294 3332 18151 13707 13707 60 0 0 0 0 0 0 0 0 0 LVVFAAPTSPLARGPVTLE CHSTEIISEPWLEDELVVFAAPTSPLARGP AAPTSPLARGPVTLEQLAAAPWILRERGSG E L V L E Q 3 1 0 0 0 0 1 1 0 0 3 0 0 1 3 1 2 0 0 3 0 0 19 1 0 6 1937.0986 P0ACR4 P0ACR4 163 181 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 1.2748E-38 122.42 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 57588000 1817200 3112400 0 0 22520000 26069000 329750 3739800 3086 218 3333 18152;18153;18154;18155;18156;18157 13708;13709;13710 13708 3 27920000 47465000 0 0 346710000 395110000 2537800 21462000 LVVGLEIGTAK ______________________________ TDRKLVVGLEIGTAKVAALVGEVLPDGMVN K L V A K V 1 0 0 0 0 0 1 2 0 1 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1 1 1098.6649 P0ABH0 P0ABH0 9 19 ftsA Cell division protein FtsA yes yes 2 0.0026993 60.518 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24019000 7634600 3294000 0 0 5850600 7239900 0 0 3087 199 3334 18158;18159;18160;18161 13711;13712;13713;13714 13711 4 7634600 3371800 0 0 7057600 8020200 0 0 LVVNEHGR EGQLGVQLFDRVGKRLVVNEHGRLLYPRAL FDRVGKRLVVNEHGRLLYPRALALLEQAVE R L V G R L 0 1 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 1 0 922.49846 P0ACR4 P0ACR4 57 64 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 1.3791E-12 134.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 227160000 65289000 79248000 0 0 38774000 43852000 0 0 3088 218 3335 18162;18163;18164;18165 13715;13716;13717;13718;13719 13715 5 65289000 81118000 0 0 46773000 48578000 0 0 LWDQQGK YAPAPFIPVRGEGSRLWDQQGKEYIDFAGG PVRGEGSRLWDQQGKEYIDFAGGIAVNALG R L W G K E 0 0 0 1 0 2 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 7 0 0 0 873.43447 P77581 P77581 33 39 astC Succinylornithine transaminase yes yes 2 8.1163E-07 118.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 99473000 28931000 35683000 0 0 18717000 16143000 0 0 3089 437 3336 18166;18167;18168;18169 13720;13721;13722;13723 13721 4 28931000 36525000 0 0 22579000 17882000 0 0 LWQLTQEVQA RSEGPGSFVPHFLDALWQLTQEVQA_____ HFLDALWQLTQEVQA_______________ A L W Q A - 1 0 0 0 0 3 1 0 0 0 2 0 0 0 0 0 1 1 0 1 0 0 10 0 1 0 1214.6295 P76423 P76423 253 262 thiM Hydroxyethylthiazole kinase yes yes 2 0.0059642 63.486 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 45589000 10771000 11913000 0 0 6469100 16436000 0 0 3090 426 3337 18170;18171;18172;18173;18174;18175;18176 13724 13724 1 14652000 17115000 0 0 9210000 21046000 0 0 LWVERIA ERGIPVYAPDNVNHPLWVERIAQLSPDVIF APDNVNHPLWVERIAQLSPDVIFSFYYRHL P L W I A Q 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 7 1 1 0 885.50724 P77398 P77398 66 72 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.0040487 73.039 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 275150000 26989000 23187000 0 0 78353000 146620000 0 0 3091 432 3338 18177;18178;18179;18180 13725;13726 13726 1 162920000 138770000 0 0 111550000 209010000 0 0 LYDLDIESPGHEQK TQQEELRVALVDGQRLYDLDIESPGHEQKK RLYDLDIESPGHEQKKANIYKGKITRIEPS R L Y Q K K 0 0 0 2 0 1 2 1 1 1 2 1 0 0 1 1 0 0 1 0 0 0 14 0 2 1 1642.7839 P21513 P21513 24 37 rne Ribonuclease E yes yes 3 0.0021285 45.115 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55624000 14284000 16986000 0 0 9124000 15229000 0 0 3092 297 3339 18181;18182;18183;18184 13727;13728;13729;13730;13731 13731 5 14284000 17387000 0 0 11006000 16871000 0 0 LYGLGTADMK RWTRDPFTLTEHDGKLYGLGTADMKGFFAF EHDGKLYGLGTADMKGFFAFILDALRDVDV K L Y M K G 1 0 0 1 0 0 0 2 0 0 2 1 1 0 0 0 1 0 1 0 0 0 10 0 0 1 1067.5321 P23908 P23908 105 114 argE Acetylornithine deacetylase yes yes 2 1.526E-20 138.1 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 329850000 63693000 66371000 0 0 85364000 114420000 0 0 3093 308 3340;3341 18185;18186;18187;18188;18189;18190;18191;18192 13732;13733;13734;13735;13736;13737;13738;13739 13734 258 7 63693000 67937000 0 0 102970000 126760000 0 0 LYHEEEVTVYDPQDVEFK TEELLTLPANEVLWRLYHEEEVTVYDPQDV EEEVTVYDPQDVEFKCTCSRERCADALKTL R L Y F K C 0 0 0 2 0 1 4 0 1 0 1 1 0 1 1 0 1 0 2 3 0 0 18 0 4 1 2239.0321 P0A6Y5 P0A6Y5 212 229 hslO 33 kDa chaperonin yes yes 3 4.5991E-12 84.653 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 52798000 15421000 11935000 0 0 13530000 11912000 0 0 3094 85 3342 18193;18194;18195;18196 13740;13741;13742 13740 3 15421000 12216000 0 0 16321000 13196000 0 0 LYILQER ADMVDDVPEEEKKQRLYILQERINQQAMAW PEEEKKQRLYILQERINQQAMAWSRRMLGT R L Y E R I 0 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 7 0 1 0 933.52837 P0AEI1 P0AEI1 362 368 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.0062208 45.718 By MS/MS 1 0 0 0 0 0 0 0 0 0 3095 237 3343 18197 13743 13743 1 0 0 0 0 0 0 0 0 LYLIVDKENEK KLAMDYGFTVLNLYKLYLIVDKENEKAIHI NLYKLYLIVDKENEKAIHIYRKLGFSVEGE K L Y E K A 0 0 1 1 0 0 2 0 0 1 2 2 0 0 0 0 0 0 1 1 0 0 11 1 2 0 1362.7395 P0A951 P0A951 120 130 speG Spermidine N(1)-acetyltransferase yes yes 2;3 4.4158E-51 159.28 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 275200000 60477000 69263000 0 0 53888000 91574000 0 0 3096 160 3344 18198;18199;18200;18201;18202;18203;18204;18205 13744;13745;13746;13747;13748;13749;13750 13749 7 60477000 70898000 0 0 65006000 101440000 0 0 LYQNQDAHTGLQFEAR SASLWECMLNQWLGRLYQNQDAHTGLQFEA YQNQDAHTGLQFEARIAQRQSLVKQLHERQ R L Y A R I 2 1 1 1 0 3 1 1 1 0 2 0 0 1 0 0 1 0 1 0 0 0 16 0 1 2 1889.902 P0A8R9 P0A8R9 111 126 hdfR HTH-type transcriptional regulator HdfR yes yes 2;3 9.2908E-98 149.3 By matching By MS/MS By MS/MS By matching 1 2 2 1 21153000 4428800 7233500 0 0 6287800 3203100 0 0 3097 152 3345 18206;18207;18208;18209;18210;18211 13751;13752 13751 2 4428800 7404200 0 0 7915500 3548400 0 0 LYRIIENA KQKRCFTDIRDGIEALYRIIENAGNRCDGE IRDGIEALYRIIENAGNRCDGEIINIGNPE A L Y N A G 1 1 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 8 1 1 0 990.54983 P77398 P77398 547 554 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 2.2148E-08 128.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 85061000 8976300 7610100 0 0 19432000 49043000 0 0 3098 432 3346 18212;18213;18214;18215 13753;13754;13755 13755 3 54186000 45546000 0 0 27666000 69910000 0 0 LYSYIASHTKHIGE ______________________________ ELYSYIASHTKHIGESASDILRRMLKFSAA E L Y G E S 1 0 0 0 0 0 1 1 2 2 1 1 0 0 0 2 1 0 2 0 0 0 14 1 0 1 1617.8151 P0AFY8 P0AFY8 10 23 seqA Negative modulator of initiation of replication yes yes 3 5.9774E-09 77.192 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 278800000 11255000 8535000 50649000 57002000 5942100 4887500 57894000 82631000 3099 252 3347 18216;18217;18218;18219;18220;18221;18222;18223 13756;13757;13758;13759;13760 13756 5 172940000 130160000 430350000 432160000 91483000 74077000 445570000 474210000 LYTSLGDAAVGR AGNATPELAQRIANRLYTSLGDAAVGRFSD ANRLYTSLGDAAVGRFSDGEVSVQINENVR R L Y G R F 2 1 0 1 0 0 0 2 0 0 2 0 0 0 0 1 1 0 1 1 0 0 12 0 0 2 1221.6354 P0A717 P0A717 23 34 prs Ribose-phosphate pyrophosphokinase yes yes 2 5.5038E-57 168.83 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 308560000 100250000 75181000 0 0 60017000 73110000 0 0 3100 91 3348 18224;18225;18226;18227 13761;13762;13763;13764 13764 4 100250000 76956000 0 0 72399000 80990000 0 0 MADAIDAYQPDYVVLAK LVSHEGLTRNEHDQKMADAIDAYQPDYVVL DAIDAYQPDYVVLAKYMRVLTPEFVARFPN K M A A K Y 4 0 0 3 0 1 0 0 0 1 1 1 1 0 1 0 0 0 2 2 0 0 17 0 0 5 1881.9183 P37051 P37051 152 168 purU Formyltetrahydrofolate deformylase yes yes 2 2.3895E-36 138.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 101670000 27207000 20327000 0 0 24250000 29886000 0 0 3101 354 3349 18228;18229;18230;18231 13765;13766;13767;13768 13766 4 27207000 20807000 0 0 29252000 33107000 0 0 MAEENKWTDNAEPTEDSSDYHVTTSQHAR KLEEEARRVAEEARRMAEENKWTDNAEPTE EDSSDYHVTTSQHARQAEDESDREVEGGRG R M A A R Q 3 1 2 3 0 1 4 0 2 0 0 1 1 0 1 3 4 1 1 1 0 0 29 1 4 4 3348.4225 P0A705;P0A705-3;P0A705-2 P0A705 209 237 infB Translation initiation factor IF-2 yes no 4 1.1656E-16 66.012 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 40406000 12940000 7810100 0 0 8242200 11413000 0 0 3102 90 3350 18232;18233;18234;18235 13769;13770;13771;13772 13769 4 12940000 7994400 0 0 9942500 12644000 0 0 MAEFGSCHR IFNQGLKSYRDLPLRMAEFGSCHRNEPSGS RDLPLRMAEFGSCHRNEPSGSLHGLMRVRG R M A H R N 1 1 0 0 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 9 0 1 1 1093.4433 P0A8M3 P0A8M3 355 363 thrS Threonine--tRNA ligase yes yes 2;3 1.3679E-07 116.73 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 33311000 7901100 9014200 0 0 8276500 8119300 0 0 3103 147 3351 18236;18237;18238;18239;18240;18241;18242;18243 13773;13774;13775;13776;13777 13775 5 7901100 9226900 0 0 9983900 8994400 0 0 MAFAEQGITELSK VAVVTKPFNFEGKKRMAFAEQGITELSKHV KRMAFAEQGITELSKHVDSLITIPNDKLLK R M A S K H 2 0 0 0 0 1 2 1 0 1 1 1 1 1 0 1 1 0 0 0 0 0 13 0 2 2 1423.7017 P0A9A6 P0A9A6 143 155 ftsZ Cell division protein FtsZ yes yes 2 4.1278E-15 125.74 By MS/MS By MS/MS By MS/MS 1 1 1 16421000 0 0 0 0 9522900 6897800 0 0 3104 161 3352 18244;18245;18246 13778;13779;13780 13780 3 0 0 0 0 11488000 7641300 0 0 MAGQMGNER IGQNQTPGKVFKGKKMAGQMGNERVTVQSL VFKGKKMAGQMGNERVTVQSLDVVRVDAER K M A E R V 1 1 1 0 0 1 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 9 0 1 1 992.41678 P60438 P60438 161 169 rplC 50S ribosomal protein L3 yes yes 2 1.9837E-06 110.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62454000 22482000 25069000 0 0 7621100 7282500 0 0 3105 380 3353 18247;18248;18249;18250 13781;13782;13783;13784 13782 4 22482000 25660000 0 0 9193300 8067400 0 0 MALIPVK PIVMERGVKYRDADKMALIPVKNVATEREA VKYRDADKMALIPVKNVATEREALLRKPEW K M A V K N 1 0 0 0 0 0 0 0 0 1 1 1 1 0 1 0 0 0 0 1 0 0 7 0 0 2 770.47243 P60716 P60716 19 25 lipA Lipoyl synthase yes yes 2 0.003684 65.263 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 3106 382 3354 18251;18252 13785;13786 13785 2 0 0 0 0 0 0 0 0 MAPPQISAEVLK AADNGDAWVEVKGQKMAPPQISAEVLKKMK GQKMAPPQISAEVLKKMKKTAEDYLGEPVT K M A L K K 2 0 0 0 0 1 1 0 0 1 1 1 1 0 2 1 0 0 0 1 0 0 12 0 1 4 1282.6955 P0A6Y8 P0A6Y8 110 121 dnaK Chaperone protein DnaK yes yes 2 2.7919E-26 137.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 704820000 190180000 133600000 0 0 196430000 184600000 0 0 3107 86 3355;3356 18253;18254;18255;18256;18257;18258;18259;18260 13787;13788;13789;13790;13791;13792;13793;13794 13788 95 8 190180000 136760000 0 0 236960000 204500000 0 0 MAPPQISAEVLKK AADNGDAWVEVKGQKMAPPQISAEVLKKMK QKMAPPQISAEVLKKMKKTAEDYLGEPVTE K M A K K M 2 0 0 0 0 1 1 0 0 1 1 2 1 0 2 1 0 0 0 1 0 0 13 1 1 4 1410.7905 P0A6Y8 P0A6Y8 110 122 dnaK Chaperone protein DnaK yes yes 2;3 6.2735E-14 123.75 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 6 4 1519500000 406270000 379920000 0 0 295860000 437400000 0 0 3108 86 3357;3358 18261;18262;18263;18264;18265;18266;18267;18268;18269;18270;18271;18272;18273;18274;18275;18276;18277 13795;13796;13797;13798;13799;13800;13801;13802;13803;13804;13805;13806;13807;13808;13809;13810 13803 95 16 406270000 388890000 0 0 357630000 484540000 0 0 MAQENPGVDVPVYGVPINTR IGAAASNTNADWYCRMAQENPGVDVPVYGV PGVDVPVYGVPINTREALGVLHFKGFIIDD R M A T R E 1 1 2 1 0 1 1 2 0 1 0 0 1 0 3 0 1 0 1 4 0 0 20 0 1 4 2155.0732 P23830 P23830 112 131 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 9.3054E-06 66.533 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28260000 7294300 7629200 0 0 6354600 6982200 0 0 3109 304 3359 18278;18279;18280;18281 13811;13812;13813;13814 13812 3 7294300 7809300 0 0 7665600 7734800 0 0 MASAYEDPKEVIE ELKADEERVKGLIEEMASAYEDPKEVIEFY EEMASAYEDPKEVIEFYSKNKELMDNMRNV E M A I E F 2 0 0 1 0 0 3 0 0 1 0 1 1 0 1 1 0 0 1 1 0 0 13 1 2 3 1480.6756 P0A850 P0A850 374 386 tig Trigger factor yes yes 2 6.7365E-10 88.681 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 104880000 9157700 8790900 23587000 23703000 6851900 8305300 10468000 14019000 3110 137 3360 18282;18283;18284;18285;18286;18287;18288;18289 13815;13816;13817;13818;13819;13820 13816 6 140710000 134060000 200420000 179710000 105490000 125880000 80562000 80455000 MASGEPLNDDDRKPWLQALNDAAFAMQR FLDGDFLHPRRNIEKMASGEPLNDDDRKPW PWLQALNDAAFAMQRTNKVSLIVCSALKKH K M A Q R T 5 2 2 4 0 2 1 1 0 0 3 1 2 1 2 1 0 1 0 0 0 0 28 2 1 7 3159.4866 P46859 P46859 51 78 gntK Thermoresistant gluconokinase yes yes 4 2.0816E-23 86.006 By MS/MS By MS/MS By MS/MS 1 1 1 81338000 33367000 0 0 0 24297000 23673000 0 0 3111 372 3361 18290;18291;18292 13821;13822;13823 13822 3 33367000 0 0 0 29310000 26225000 0 0 MAVVSKQVNMELA ADLGAMVVTGLGGNPMAVVSKQVNMELAKI NPMAVVSKQVNMELAKIKQKCPLYEANGQA P M A L A K 2 0 1 0 0 1 1 0 0 0 1 1 2 0 0 1 0 0 0 3 0 0 13 1 1 1 1418.7262 LSD1-FL-His LSD1-FL-His 344 356 yes yes 2 2.3131E-13 107.45 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 4 4 114270000 11203000 13356000 0 0 40980000 48732000 0 0 3112 24 3362;3363;3364 18293;18294;18295;18296;18297;18298;18299;18300;18301;18302;18303;18304;18305;18306;18307 13824;13825;13826;13827;13828;13829;13830;13831 13827 46;48 8 67628000 79934000 0 0 58342000 69468000 0 0 MAYIELVDRSEKA TRILKCGFRAGDNAPMAYIELVDRSEKAEA APMAYIELVDRSEKAEAAAE__________ P M A K A E 2 1 0 1 0 0 2 0 0 1 1 1 1 0 0 1 0 0 1 1 0 0 13 2 2 1 1523.7654 P0AG44 P0AG44 110 122 rplQ 50S ribosomal protein L17 yes yes 2;3 7.914E-07 83.31 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 47817000 3838300 5080600 0 0 31710000 7188200 0 0 3113 257 3365;3366 18308;18309;18310;18311;18312;18313;18314;18315;18316;18317;18318 13832;13833;13834;13835 13833 227 4 23170000 30407000 0 0 45145000 10247000 0 0 MCGLVMLLPHGYEGQGPEHSSAR VIDQFISSGEQKWGRMCGLVMLLPHGYEGQ PHGYEGQGPEHSSARLERYLQLCAEQNMQV R M C A R L 1 1 0 0 1 1 2 4 2 0 3 0 2 0 2 2 0 0 1 1 0 0 23 0 2 3 2525.1614 P0AFG3 P0AFG3 711 733 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 4 0.012667 20.296 By MS/MS By matching 1 1 18479000 0 9745300 0 0 0 8733800 0 0 3114 246 3367 18319;18320 13836 13836 1 0 9975300 0 0 0 9675100 0 0 MCIFQHQYLAEHK MHEFFINGQYRNAIRMCIFQHQYLAEHKTP IRMCIFQHQYLAEHKTPGQTLLKPTAQ___ R M C H K T 1 0 0 0 1 2 1 0 2 1 1 1 1 1 0 0 0 0 1 0 0 0 13 0 1 1 1703.7912 P0A951 P0A951 162 174 speG Spermidine N(1)-acetyltransferase yes yes 3 7.019E-08 90.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45691000 9943400 9244600 0 0 9353200 17150000 0 0 3115 160 3368 18321;18322;18323;18324 13837;13838;13839;13840 13837 4 9943400 9462800 0 0 11283000 18998000 0 0 MDDLLQGFVAQHR FGPYKINGDKEIMRRMDDLLQGFVAQHRMK RRMDDLLQGFVAQHRMKLPGSAYIPCYEIC R M D H R M 1 1 0 2 0 2 0 1 1 0 2 0 1 1 0 0 0 0 0 1 0 0 13 0 0 1 1528.7456 P0ADR8 P0ADR8 426 438 ygdH LOG family protein YgdH yes yes 3 0.0051708 27.409 By MS/MS 1 0 0 0 0 0 0 0 0 0 3116 225 3369 18325 13841 13841 1 0 0 0 0 0 0 0 0 MDEFKPEDE ______________________________ ______________________________ - M D D E L 0 0 0 2 0 0 3 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 9 1 2 1 1138.4489 P11557 P11557 1 9 damX Cell division protein DamX yes yes 2 0.018316 53.775 By MS/MS By MS/MS By MS/MS 1 1 1 8864900 0 0 3005700 4100000 0 1759100 0 0 3117 277 3370 18326;18327;18328 13842;13843 13842 0 0 0 25539000 31085000 0 26662000 0 0 MDEQGKSLDDFLIKQ TWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ MDEQGKSLDDFLIKQ_______________ A M D K Q - 0 0 0 3 0 2 1 1 0 1 2 2 1 1 0 1 0 0 0 0 0 0 15 2 1 0 1765.8557 P0ACF8 P0ACF8 123 137 hns DNA-binding protein H-NS yes yes 2;3 1.1441E-27 103.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 1 1 2 2 1 1 92700000 3876900 4821800 4332700 6491700 44020000 25262000 1259000 2635800 3118 210 3371 18329;18330;18331;18332;18333;18334;18335;18336;18337;18338;18339 13844;13845;13846;13847 13844 4 23403000 28858000 36815000 49218000 62670000 36012000 9689700 15126000 MDESLANLSE RRTSRRKRAKVEYREMDESLANLSEDEYYS VEYREMDESLANLSEDEYYSEEERNAKAEK E M D S E D 1 0 1 1 0 0 2 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 10 0 1 1 1107.4754 LSD1-FL-His LSD1-FL-His 125 134 yes yes 1;2 4.1961E-37 158.07 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 3 3 3 2 384920000 6969900 7480300 65116000 107970000 33187000 32618000 70789000 60791000 3119 24 3372;3373 18340;18341;18342;18343;18344;18345;18346;18347;18348;18349;18350;18351;18352;18353;18354;18355;18356;18357;18358;18359;18360;18361;18362 13848;13849;13850;13851;13852;13853 13850 43 4 107090000 114070000 553280000 818580000 510950000 494370000 544810000 348870000 MDESLANLSEDE RRTSRRKRAKVEYREMDESLANLSEDEYYS YREMDESLANLSEDEYYSEEERNAKAEKEK E M D D E Y 1 0 1 2 0 0 3 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 12 0 2 1 1351.5449 LSD1-FL-His LSD1-FL-His 125 136 yes yes 2 6.7607E-125 185.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 2 5 6 3 2 10702000000 66434000 87323000 2650300000 2765400000 323810000 412480000 1894700000 2501000000 3120 24 3374;3375;3376;3377 18363;18364;18365;18366;18367;18368;18369;18370;18371;18372;18373;18374;18375;18376;18377;18378;18379;18380;18381;18382;18383;18384;18385;18386;18387;18388;18389;18390;18391 13854;13855;13856;13857;13858;13859;13860;13861;13862;13863;13864;13865;13866;13867;13868;13869;13870 13860 43 9 10 886730000 1215600000 22519000000 20966000000 4885400000 6163400000 14582000000 14353000000 MDLKRGIDKA IITEGLKAVAAGMNPMDLKRGIDKAVTAAV AGMNPMDLKRGIDKAVTAAVEELKALSVPC P M D K A V 1 1 0 2 0 0 0 1 0 1 1 2 1 0 0 0 0 0 0 0 0 0 10 3 0 0 1145.6227 P0A6F5 P0A6F5 114 123 groL 60 kDa chaperonin yes yes 2 0.0024234 91.584 By MS/MS By MS/MS By MS/MS 1 1 1 20449000 3583000 3409400 0 0 0 13457000 0 0 3121 68 3378 18392;18393;18394 13871;13872;13873 13873 3 21629000 20405000 0 0 0 19182000 0 0 MDNIDEEALHQIWSR ERVRHHQLQALALLRMDNIDEEALHQIWSR MDNIDEEALHQIWSRCRANYFVRHSPNQLA R M D S R C 1 1 1 2 0 1 2 0 1 2 1 0 1 0 0 1 0 1 0 0 0 0 15 0 2 1 1855.8523 P27249 P27249 652 666 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 1.0846E-24 133.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 126100000 38526000 32081000 0 0 20447000 35051000 0 0 3122 320 3379 18395;18396;18397;18398;18399;18400;18401;18402 13874;13875;13876;13877;13878;13879;13880;13881 13874 8 38526000 32838000 0 0 24665000 38828000 0 0 MDQAGIIR ______________________________ ______________________________ - M D I R D 1 1 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 8 0 0 1 902.46439 P0ACI0 P0ACI0 1 8 rob Right origin-binding protein yes yes 2 0.0024745 81.784 By matching By matching By MS/MS By MS/MS 1 2 2 2 100750000 3941200 51969000 0 0 5502300 39339000 0 0 3123 211 3380;3381 18403;18404;18405;18406;18407;18408;18409 13882;13883;13884;13885 13884 188 3 3941200 53195000 0 0 7124000 43579000 0 0 MDTELLK ______________________________ ______________________________ - M D L K T 0 0 0 1 0 0 1 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 7 0 1 0 848.43135 P0A8R9 P0A8R9 1 7 hdfR HTH-type transcriptional regulator HdfR yes yes 2 0.0024379 94.407 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 184330000 47536000 42200000 0 943750 40345000 46607000 1849500 4849300 3124 152 3382 18410;18411;18412;18413;18414;18415;18416 13886;13887;13888;13889 13888 4 47536000 43196000 0 7155100 48668000 51630000 14234000 27830000 MDTRFVQAHKE ______________________________ ______________________________ - M D K E A 1 1 0 1 0 1 1 0 1 0 0 1 1 1 0 0 1 0 0 1 0 0 11 2 0 1 1360.6558 P45566 P45566 1 11 yhdT Uncharacterized protein YhdT yes yes 2 0.0025001 41.448 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 35546000 0 0 4126400 8984100 2914700 3026600 5253500 11241000 3125 369 3383 18417;18418;18419;18420;18421;18422 13890;13891;13892;13893 13890 297 4 0 0 35061000 68114000 44875000 45873000 40432000 64510000 MDTSKLDLILVEGFKHEEIAK TPDEEELDLQFLASRMDTSKLDLILVEGFK DLILVEGFKHEEIAKIVLFRDGAGHRPEEL R M D A K I 1 0 0 2 0 0 3 1 1 2 3 3 1 1 0 1 1 0 0 1 0 0 21 2 3 1 2415.2719 P32125 P32125 97 117 mobB Molybdopterin-guanine dinucleotide biosynthesis adapter protein yes yes 4 0.00011103 42.639 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 37397000 10444000 12157000 0 0 8053700 6742100 0 0 3126 337 3384 18423;18424;18425;18426 13894;13895;13896 13894 3 10444000 12444000 0 0 9715100 7468700 0 0 MDVKEELLG QIFDHQARLHSFELAMDVKEELLG______ HSFELAMDVKEELLG_______________ A M D L G - 0 0 0 1 0 0 2 1 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 1 2 0 1032.5161 P0ADV5 P0ADV5 327 335 yhbW Uncharacterized protein YhbW yes yes 2 0.0039058 87.476 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 206200000 29609000 29838000 0 0 67578000 79173000 0 0 3127 226 3385;3386 18427;18428;18429;18430;18431;18432;18433;18434 13897;13898;13899 13897 204 2 178740000 178580000 0 0 96210000 112860000 0 0 MDVSYLLDSLNDK ______________________________ ______________________________ - M D D K Q 0 0 1 3 0 0 0 0 0 0 3 1 1 0 0 2 0 0 1 1 0 0 13 0 0 0 1511.7178 P03018 P03018 1 13 uvrD DNA helicase II yes yes 2 4.3495E-06 79.693 By MS/MS By MS/MS By MS/MS 1 1 1 12379000 6240800 3143900 0 0 2994100 0 0 0 3128 41 3387 18435;18436;18437 13900;13901 13901 2 6240800 3218100 0 0 3611800 0 0 0 MDYRKIIKE ______________________________ ______________________________ - M D K E I 0 1 0 1 0 0 1 0 0 2 0 2 1 0 0 0 0 0 1 0 0 0 9 3 0 0 1194.6431 P30177 P30177 1 9 ybiB Uncharacterized protein YbiB yes yes 3 0.013744 46.406 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 383050000 59913000 32869000 63221000 50376000 22116000 22658000 52020000 79878000 3129 332 3388 18438;18439;18440;18441;18442;18443;18444;18445 13902;13903 13903 2 920550000 501260000 537180000 381930000 340500000 343410000 400360000 458410000 MEAPAVR ______________________________ SFTVDHTRMEAPAVRVAKTMNTPHGDAITV R M E V R V 2 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 7 0 1 3 772.39016 P45578 P45578 14 20 luxS S-ribosylhomocysteine lyase yes yes 2 0.023285 44.692 By MS/MS By matching By matching By matching 1 1 1 1 23557000 6380100 6373800 0 0 5281600 5521700 0 0 3130 370 3389 18446;18447;18448;18449 13904 13904 1 6380100 6524300 0 0 6371200 6116800 0 0 MEFLSGK ______________________________ ______________________________ - M E G K K 0 0 0 0 0 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 7 0 1 0 810.39458 LSD1-FL-His LSD1-FL-His 1 7 yes yes 2 0.00029404 106.42 By MS/MS By MS/MS By MS/MS By MS/MS By matching 7 9 7 7 1 40360000000 11723000000 11135000000 0 0 8198100000 9301100000 2924900 0 3131 24 3390;3391 18450;18451;18452;18453;18454;18455;18456;18457;18458;18459;18460;18461;18462;18463;18464;18465;18466;18467;18468;18469;18470;18471;18472;18473;18474;18475;18476;18477;18478;18479;18480 13905;13906;13907;13908;13909;13910;13911;13912;13913;13914;13915;13916;13917;13918;13919;13920;13921;13922;13923;13924;13925;13926;13927;13928;13929;13930;13931;13932;13933;13934 13905 49 30 11792000000 11490000000 0 0 9914200000 10333000000 22511000 0 MEFLSGKK ______________________________ ______________________________ - M E K K A 0 0 0 0 0 0 1 1 0 0 1 2 1 1 0 1 0 0 0 0 0 0 8 1 1 0 938.48954 LSD1-FL-His LSD1-FL-His 1 8 yes yes 2 1.7364E-11 127.12 By MS/MS By MS/MS By MS/MS By MS/MS 7 7 6 6 3411500000 1542900000 1493400000 0 0 191260000 183860000 0 0 3132 24 3392;3393;3394 18481;18482;18483;18484;18485;18486;18487;18488;18489;18490;18491;18492;18493;18494;18495;18496;18497;18498;18499;18500;18501;18502;18503;18504;18505;18506 13935;13936;13937;13938;13939;13940;13941;13942;13943;13944;13945;13946;13947;13948 13946 49 13 1608700000 1567200000 0 0 249050000 220000000 0 0 MEFLSGKKA ______________________________ ______________________________ - M E K A A 1 0 0 0 0 0 1 1 0 0 1 2 1 1 0 1 0 0 0 0 0 0 9 2 1 0 1009.5267 LSD1-FL-His LSD1-FL-His 1 9 yes yes 2 2.8763E-15 135.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 5 4 1 1109700000 222560000 174090000 0 0 208320000 500220000 0 4548400 3133 24 3395;3396;3397;3398 18507;18508;18509;18510;18511;18512;18513;18514;18515;18516;18517;18518;18519;18520;18521;18522;18523;18524 13949;13950;13951;13952;13953;13954;13955;13956;13957;13958 13953 49 10 1356800000 1048900000 0 0 312730000 713070000 0 26102000 MEFLSGKKAA ______________________________ ______________________________ - M E A A A 2 0 0 0 0 0 1 1 0 0 1 2 1 1 0 1 0 0 0 0 0 0 10 2 1 1 1080.5638 LSD1-FL-His LSD1-FL-His 1 10 yes yes 2;3 9.7004E-08 126.07 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 5 4 1 6 8 1 1 3488400000 536510000 386210000 0 977890 883820000 1677800000 1777200 1281000 3134 24 3399;3400;3401 18525;18526;18527;18528;18529;18530;18531;18532;18533;18534;18535;18536;18537;18538;18539;18540;18541;18542;18543;18544;18545;18546;18547;18548;18549;18550 13959;13960;13961;13962;13963;13964;13965;13966;13967;13968;13969;13970;13971;13972;13973;13974;13975 13971 49 15 3245400000 2316900000 0 7413900 1272100000 2406000000 13678000 7351600 MEFLSGKKAAA ______________________________ ______________________________ - M E A A A 3 0 0 0 0 0 1 1 0 0 1 2 1 1 0 1 0 0 0 0 0 0 11 2 1 2 1151.6009 LSD1-FL-His LSD1-FL-His 1 11 yes yes 2;3 9.7285E-11 121.73 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 6 6 1 6 6 1 4266500000 784910000 850620000 0 1650900 27529000 2598500000 0 3295000 3135 24 3402;3403 18551;18552;18553;18554;18555;18556;18557;18558;18559;18560;18561;18562;18563;18564;18565;18566;18567;18568;18569;18570;18571;18572;18573;18574;18575;18576 13976;13977;13978;13979;13980;13981;13982;13983;13984;13985;13986;13987;13988;13989 13987 49 14 4728700000 5058700000 0 12516000 72068000 3748600000 0 18909000 MEFLSGKKAAAAAAAAAAAATGTE ______________________________ AAAAAAAAAAATGTEAGPGTAGGSENGSEV - M E T E A 12 0 0 0 0 0 2 2 0 0 1 2 1 1 0 1 2 0 0 0 0 0 24 2 1 12 2179.0943 LSD1-FL-His LSD1-FL-His 1 24 yes yes 2;3 1.6368E-98 164.41 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 3 4 3 3 2 2660300000 149920000 197850000 73444000 77523000 822640000 979070000 184300000 175540000 3136 24 3404;3405 18577;18578;18579;18580;18581;18582;18583;18584;18585;18586;18587;18588;18589;18590;18591;18592;18593;18594;18595;18596;18597;18598;18599;18600;18601;18602;18603 13990;13991;13992;13993;13994;13995;13996;13997;13998;13999;14000;14001;14002;14003;14004;14005;14006;14007;14008;14009;14010 13993 49 21 2303500000 3017200000 624050000 587740000 12665000000 14839000000 1418400000 1007400000 MEFLSGKKAAAAAAAAAAAATGTEAGPGTAGGSE ______________________________ ATGTEAGPGTAGGSENGSEVAAQPAGLSGP - M E S E N 14 0 0 0 0 0 3 6 0 0 1 2 1 1 1 2 3 0 0 0 0 0 34 2 2 15 2963.4295 LSD1-FL-His LSD1-FL-His 1 34 yes yes 3 3.7039E-21 87.719 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 4 2 231620000 9553200 5064200 0 0 84369000 117730000 0 14906000 3137 24 3406;3407 18604;18605;18606;18607;18608;18609;18610;18611;18612;18613;18614;18615 14011;14012;14013;14014 14012 49 4 146780000 77230000 0 0 1298900000 1784400000 0 85543000 MEMLSGAEMVVR ______________________________ ______________________________ - M E V R S 1 1 0 0 0 0 2 1 0 0 1 0 3 0 0 1 0 0 0 2 0 0 12 0 2 1 1351.6298 P00893 P00893 1 12 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 2.3287E-35 147.95 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 90092000 26381000 21905000 0 0 19329000 22477000 0 0 3138 29 3408 18616;18617;18618;18619 14015;14016;14017;14018 14018 4 26381000 22422000 0 0 23316000 24900000 0 0 MEMTNAQR ______________________________ ______________________________ - M E Q R L 1 1 1 0 0 1 1 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 8 0 1 1 979.42154 P0A8W8 P0A8W8 1 8 yfbU UPF0304 protein YfbU yes yes 2 0.002609 79.469 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12781000 3307200 4334200 0 0 2712500 2427000 0 0 3139 155 3409 18620;18621;18622;18623 14019;14020;14021 14019 3 3307200 4436500 0 0 3272100 2688600 0 0 MEQNPQSQLK ______________________________ ______________________________ - M E L K L 0 0 1 0 0 3 1 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 10 0 1 1 1201.5761 P00579 P00579 1 10 rpoD RNA polymerase sigma factor RpoD yes yes 2 3.4227E-110 201.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 491820000 140830000 181210000 0 0 94190000 75595000 0 0 3140 27 3410;3411 18624;18625;18626;18627;18628;18629;18630;18631 14022;14023;14024;14025;14026;14027;14028;14029 14027 57 8 140830000 185490000 0 0 113620000 83742000 0 0 MEQNPQSQLKLLVTRGKE ______________________________ NPQSQLKLLVTRGKEQGYLTYAEVNDHLPE - M E K E Q 0 1 1 0 0 3 2 1 0 0 3 2 1 0 1 1 1 0 0 1 0 0 18 3 1 1 2098.1205 P00579 P00579 1 18 rpoD RNA polymerase sigma factor RpoD yes yes 3;4 1.9929E-68 162.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 3 4 4 4 4 2574200000 171300000 161240000 402710000 448190000 73186000 67810000 510740000 739030000 3141 27 3412;3413 18632;18633;18634;18635;18636;18637;18638;18639;18640;18641;18642;18643;18644;18645;18646;18647;18648;18649;18650;18651;18652;18653;18654;18655;18656;18657;18658;18659;18660;18661 14030;14031;14032;14033;14034;14035;14036;14037;14038;14039;14040;14041;14042;14043;14044;14045;14046;14047;14048;14049 14042 57 19 2631900000 2458900000 3421800000 3398000000 1126800000 1027800000 3930800000 4241100000 METDITIR DASSISDQSLNLLPRMETDITIRSSEKILI SLNLLPRMETDITIRSSEKILIVDAKYYKS R M E I R S 0 1 0 1 0 0 1 0 0 2 0 0 1 0 0 0 2 0 0 0 0 0 8 0 1 0 977.48518 P15006 P15006 241 248 mcrC Protein McrC yes yes 2 0.0027978 75.109 By matching By matching By MS/MS By matching 1 1 1 1 10088000 0 0 1340300 1192300 3924800 3630300 0 0 3142 280 3414 18662;18663;18664;18665 14050;14051 14051 2 0 0 11388000 9039300 4734500 4021500 0 0 METGIAETP GPQAGPTVVPGSATPMETGIAETPEGRRTS PGSATPMETGIAETPEGRRTSRRKRAKVEY P M E T P E 1 0 0 0 0 0 2 1 0 1 0 0 1 0 1 0 2 0 0 0 0 0 9 0 2 1 947.427 LSD1-FL-His LSD1-FL-His 99 107 yes yes 1;2 2.5208E-31 154.09 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 155800000 24191000 37270000 0 0 58007000 36333000 0 0 3143 24 3415;3416 18666;18667;18668;18669;18670;18671;18672;18673;18674;18675 14052;14053;14054;14055;14056 14052 41 5 146030000 223060000 0 0 82584000 51793000 0 0 METTKPSFQDVLE ______________________________ ______________________________ - M E L E F 0 0 0 1 0 1 2 0 0 0 1 1 1 1 1 1 2 0 0 1 0 0 13 1 1 1 1523.7178 P0A8M6 P0A8M6 1 13 yeeX UPF0265 protein YeeX yes yes 2 2.6655E-08 80.688 By MS/MS By MS/MS By MS/MS 2 2 1 15545000 0 0 6901800 5412200 0 0 3231000 0 3144 148 3417;3418 18676;18677;18678;18679;18680 14057;14058;14059 14058 3 0 0 58643000 41033000 0 0 24866000 0 MFAAVGNHVVELHR VRLTISEGRYHQVKRMFAAVGNHVVELHRE RMFAAVGNHVVELHRERIGGITLDADLAPG R M F H R E 2 1 1 0 0 0 1 1 2 0 1 0 1 1 0 0 0 0 0 3 0 0 14 0 1 2 1578.8089 P0AA43 P0AA43 189 202 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 1.5547E-108 202.16 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 3 3 3280800000 934660000 861320000 0 0 572240000 912590000 0 0 3145 183 3419;3420 18681;18682;18683;18684;18685;18686;18687;18688;18689;18690;18691;18692;18693 14060;14061;14062;14063;14064;14065;14066;14067;14068;14069;14070;14071;14072;14073 14066 175 14 955210000 881650000 0 0 690300000 1010900000 0 0 MFAAVGNHVVELHRER VRLTISEGRYHQVKRMFAAVGNHVVELHRE FAAVGNHVVELHRERIGGITLDADLAPGEY R M F E R I 2 2 1 0 0 0 2 1 2 0 1 0 1 1 0 0 0 0 0 3 0 0 16 1 2 2 1863.9526 P0AA43 P0AA43 189 204 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4 6.3386E-05 58.079 By MS/MS 1 16176000 0 16176000 0 0 0 0 0 0 3146 183 3421 18694 14074 14074 0 0 16558000 0 0 0 0 0 0 MFEPMELTNDAVIK ______________________________ ______________________________ - M F I K V 1 0 1 1 0 0 2 0 0 1 1 1 2 1 1 0 1 0 0 1 0 0 14 0 2 2 1636.7841 P0A9A6 P0A9A6 1 14 ftsZ Cell division protein FtsZ yes yes 2 1.046E-10 90.685 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23883000 6144300 5776600 0 0 5544600 6417500 0 0 3147 161 3422 18695;18696;18697;18698 14075;14076;14077;14078 14076 4 6144300 5913000 0 0 6688400 7109100 0 0 MFKPELLSPAGTLK ______________________________ ______________________________ - M F L K N 1 0 0 0 0 0 1 1 0 0 3 2 1 1 2 1 1 0 0 0 0 0 14 1 1 3 1530.848 P76403 P76403 1 14 yegQ Uncharacterized protease YegQ yes yes 3 3.3631E-11 92.063 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 111530000 35111000 25050000 0 0 27236000 24130000 0 0 3148 424 3423;3424 18699;18700;18701;18702;18703;18704;18705;18706;18707 14079;14080;14081;14082;14083 14080 5 35111000 25642000 0 0 32855000 26731000 0 0 MFYLDIQANLE TRLESRPIHGNPWEEMFYLDIQANLESAEM PWEEMFYLDIQANLESAEMQKALKELGEIT E M F L E S 1 0 1 1 0 1 1 0 0 1 2 0 1 1 0 0 0 0 1 0 0 0 11 0 0 1 1355.6431 P0A9J8 P0A9J8 341 351 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.014638 43.246 By MS/MS 1 8358500 0 0 0 0 0 8358500 0 0 3149 166 3425 18708 14084 14084 1 0 0 0 0 0 126690000 0 0 MGADLAINSHTE IAIDVNDEQLKLATEMGADLAINSHTEDAA ATEMGADLAINSHTEDAAKIVQEKTGGAHA E M G T E D 2 0 1 1 0 0 1 1 1 1 1 0 1 0 0 1 1 0 0 0 0 0 12 0 0 2 1257.566 P39451 P39451 205 216 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2 0.0034717 47.603 By MS/MS By MS/MS 2 1 6164800 6164800 0 0 0 0 0 0 0 3150 364 3426 18709;18710;18711 14085;14086 14086 2 48992000 0 0 0 0 0 0 0 MGAEAIQALLK YLDALEEFGDEFDAKMGAEAIQALLKSMDL FDAKMGAEAIQALLKSMDLEQECEQLREEL K M G L K S 3 0 0 0 0 1 1 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 11 0 1 3 1143.6322 P0A8T7 P0A8T7 180 190 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 8.4237E-17 128.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44876000 12403000 11715000 0 0 8273400 12486000 0 0 3151 153 3427 18712;18713;18714;18715 14087;14088;14089;14090 14090 4 12403000 11991000 0 0 9980300 13831000 0 0 MGEIIIDAK LPNTNWLEGAVERNRMGEIIIDAKCETNVK AVERNRMGEIIIDAKCETNVKGVFAAGDCT R M G A K C 1 0 0 1 0 0 1 1 0 3 0 1 1 0 0 0 0 0 0 0 0 0 9 0 1 1 988.52632 P35340 P35340 467 475 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 3.93E-27 148.99 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 4 2 3 1 1322000000 363980000 260960000 0 0 274380000 419950000 0 2680200 3152 348 3428;3429 18716;18717;18718;18719;18720;18721;18722;18723;18724;18725;18726;18727 14091;14092;14093;14094;14095;14096;14097;14098;14099 14097 282 9 363980000 270950000 0 0 330990000 465210000 0 15381000 MGFGATR LLALLEGRLDNVVYRMGFGATRAEARQLVS RLDNVVYRMGFGATRAEARQLVSHKAIMVN R M G T R A 1 1 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 7 0 0 1 738.34829 P0A7V8 P0A7V8 105 111 rpsD 30S ribosomal protein S4 yes yes 2 5.4548E-11 127.1 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 556810000 137530000 183220000 0 0 117920000 118130000 0 0 3153 130 3430;3431 18728;18729;18730;18731;18732;18733;18734;18735 14100;14101;14102;14103;14104;14105;14106;14107 14106 126 7 137530000 187550000 0 0 142250000 130870000 0 0 MGFGNLNK FVPPLPEWKTSAVQRMGFGNLNKVVLCFDR KTSAVQRMGFGNLNKVVLCFDRVFWDPSVN R M G N K V 0 0 2 0 0 0 0 2 0 0 1 1 1 1 0 0 0 0 0 0 0 0 8 0 0 0 879.42727 LSD1-FL-His LSD1-FL-His 656 663 yes yes 1;2 3.7255E-59 178.24 By MS/MS By MS/MS By MS/MS By MS/MS 5 6 6 7 26547000000 6515400000 6359500000 0 0 7546300000 6126000000 0 0 3154 24 3432;3433 18736;18737;18738;18739;18740;18741;18742;18743;18744;18745;18746;18747;18748;18749;18750;18751;18752;18753;18754;18755;18756;18757;18758;18759 14108;14109;14110;14111;14112;14113;14114;14115;14116;14117;14118;14119;14120;14121;14122;14123;14124;14125;14126 14123 50 16 6515400000 6509600000 0 0 9140100000 6808900000 0 0 MGHIELASPTAHIWFLK KCGVEVTQTKVRRERMGHIELASPTAHIWF HIELASPTAHIWFLKSLPSRIGLLLDMPLR R M G L K S 2 0 0 0 0 0 1 1 2 2 2 1 1 1 1 1 1 1 0 0 0 0 17 0 1 3 1950.0186 P0A8T7 P0A8T7 102 118 rpoC DNA-directed RNA polymerase subunit beta yes yes 4 0.0015367 36.193 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29860000 7408600 8426200 0 0 4087700 9937500 0 0 3155 153 3434 18760;18761;18762;18763 14127;14128;14129 14129 3 7408600 8625100 0 0 4931000 11009000 0 0 MGICKDDLAPSLGR ARIIAVLEPRSNTMKMGICKDDLAPSLGRA KMGICKDDLAPSLGRADEVFLLQPAHIPWQ K M G G R A 1 1 0 2 1 0 0 2 0 1 2 1 1 0 1 1 0 0 0 0 0 0 14 1 0 2 1531.7487 P37773 P37773 367 380 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 3 1.4301E-06 77.633 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 61728000 20960000 14234000 0 0 10474000 15266000 794100 0 3156 360 3435 18764;18765;18766;18767;18768 14130;14131;14132;14133 14133 4 20960000 14570000 0 0 12635000 16911000 6111500 0 MGLALGR ISIAVEPKTKADQEKMGLALGRLAKEDPSF KTKADQEKMGLALGRLAKEDPSFRVWTDEE K M G G R L 1 1 0 0 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 0 0 0 7 0 0 1 716.40033 P0A6M8 P0A6M8 431 437 fusA Elongation factor G yes yes 2 0.0026693 84.025 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23848000 5343100 5280500 0 0 4117800 9106200 0 0 3157 76 3436 18769;18770;18771;18772 14134;14135;14136;14137 14137 4 5343100 5405200 0 0 4967400 10088000 0 0 MGMNIINDDITGR MPGHLTWYFGEELKKMGMNIINDDITGRVH KKMGMNIINDDITGRVHKDRKLLTGDSPFA K M G G R V 0 1 2 2 0 0 0 2 0 3 0 0 2 0 0 0 1 0 0 0 0 0 13 0 0 0 1448.6752 P31658 P31658 238 250 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 2.3503E-07 84.658 By MS/MS By MS/MS 1 1 75842000 33928000 0 0 0 0 41915000 0 0 3158 335 3437 18773;18774 14138;14139 14138 1 33928000 0 0 0 0 46432000 0 0 MGTLDPLGTNIK RPAVVESVARGTSVRMGTLDPLGTNIKLGK SVRMGTLDPLGTNIKLGKTSYSEFLSQLAN R M G I K L 0 0 1 1 0 0 0 2 0 1 2 1 1 0 1 0 2 0 0 0 0 0 12 0 0 1 1258.6591 P39172 P39172 275 286 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 2.3527E-45 155.06 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 3 3 1211500000 339840000 256260000 0 0 275870000 339560000 0 0 3159 361 3438;3439 18775;18776;18777;18778;18779;18780;18781;18782;18783;18784;18785;18786;18787 14140;14141;14142;14143 14142 293 4 339840000 267830000 0 0 332780000 376160000 0 0 MGVEMTLLR LLIGRKELPYAPDRRMGVEMTLLRALAFHP YAPDRRMGVEMTLLRALAFHPRMPLPEPEV R M G L R A 0 1 0 0 0 0 1 1 0 0 2 0 2 0 0 0 1 0 0 1 0 0 9 0 1 0 1048.5409 P06710 P06710 347 355 dnaX DNA polymerase III subunit tau yes yes 2 0.0020955 74.486 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 59955000 13457000 20709000 0 0 13954000 11835000 0 0 3160 51 3440 18788;18789;18790;18791 14144;14145;14146;14147 14144 4 13457000 21198000 0 0 16833000 13111000 0 0 MHELAEK DRTLTQEDVEALEKRMHELAEKNYDVIKKK DVEALEKRMHELAEKNYDVIKKKVSWHEAR R M H E K N 1 0 0 0 0 0 2 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 7 0 2 1 856.41129 P0A8M3 P0A8M3 124 130 thrS Threonine--tRNA ligase yes yes 2 0.0026462 83.753 By MS/MS By MS/MS By MS/MS 1 1 1 22049000 7976000 10573000 0 0 3500300 0 0 0 3161 147 3441 18792;18793;18794 14148;14149;14150 14150 3 7976000 10822000 0 0 4222400 0 0 0 MHENQQPQTE ______________________________ ______________________________ - M H T E A 0 0 1 0 0 3 2 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 10 0 1 1 1240.5142 P0AFD1 P0AFD1 1 10 nuoE NADH-quinone oxidoreductase subunit E yes yes 2 3.3473E-28 149.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 2 2 99746000 1650700 1706200 24111000 26284000 5243100 4707000 17309000 18735000 3162 244 3442;3443 18795;18796;18797;18798;18799;18800;18801;18802;18803;18804;18805;18806 14151;14152;14153;14154;14155;14156;14157;14158;14159 14152 216 8 25363000 26020000 204860000 199270000 80723000 71342000 133210000 107520000 MHENQQPQTEAFELSAAER ______________________________ QQPQTEAFELSAAEREAIEHEMHHYEDPRA - M H E R E 3 1 1 0 0 3 4 0 1 0 1 0 1 1 1 1 1 0 0 0 0 0 19 0 4 4 2214.9964 P0AFD1 P0AFD1 1 19 nuoE NADH-quinone oxidoreductase subunit E yes yes 3 4.2412E-13 89.011 By MS/MS By MS/MS By MS/MS 2 2 2 96376000 44373000 0 0 0 20017000 31987000 0 0 3163 244 3444;3445 18807;18808;18809;18810;18811;18812 14160;14161;14162;14163;14164;14165 14160 216 6 44373000 0 0 0 24146000 35434000 0 0 MHHYEDPRAASIE AFELSAAEREAIEHEMHHYEDPRAASIEAL HEMHHYEDPRAASIEALKIVQKQRGWVPDG E M H I E A 2 1 0 1 0 0 2 0 2 1 0 0 1 0 1 1 0 0 1 0 0 0 13 1 1 3 1554.6885 P0AFD1 P0AFD1 26 38 nuoE NADH-quinone oxidoreductase subunit E yes yes 3 0.00053655 54.7 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 1 2 236640000 13313000 13064000 45837000 65453000 11539000 9104800 22548000 55779000 3164 244 3446;3447 18813;18814;18815;18816;18817;18818;18819;18820;18821;18822;18823 14166;14167;14168;14169;14170;14171;14172;14173;14174 14167 217 9 204550000 199230000 389470000 496240000 177650000 138000000 173540000 320100000 MHITLRQLE ______________________________ ______________________________ - M H L E V 0 1 0 0 0 1 1 0 1 1 2 0 1 0 0 0 1 0 0 0 0 0 9 1 0 0 1139.6121 P0ACR4 P0ACR4 1 9 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2;3 0.0015604 57.177 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 1 1 37904000 2516500 7510400 6072500 7155300 5046900 2531500 2523100 4548300 3165 218 3448 18824;18825;18826;18827;18828;18829;18830;18831;18832;18833;18834;18835;18836 14175;14176;14177;14178;14179 14177 5 38666000 114540000 51597000 54248000 77701000 38369000 19418000 26102000 MHQGHLVKAAVE ADAFTLFELFERKLEMHQGHLVKAAVELAK KLEMHQGHLVKAAVELAKDWRTDRMLRKLE E M H V E L 2 0 0 0 0 1 1 1 2 0 1 1 1 0 0 0 0 0 0 2 0 0 12 1 0 2 1318.6816 P0A7B8 P0A7B8 67 78 hslV ATP-dependent protease subunit HslV yes yes 3 0.011529 38.634 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 17372000 2817400 2901100 0 0 2863200 2501000 2593300 3696500 3166 100 3449 18837;18838;18839;18840;18841;18842 14180 14180 1 43289000 44242000 0 0 44082000 37906000 19959000 21213000 MIARRPERVIE HTGHIGGIKQATFEEMIARRPERVIEIAVK TFEEMIARRPERVIEIAVKGMLPKGPLGRA E M I I E I 1 3 0 0 0 0 2 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 11 3 1 2 1368.766 P0AA10 P0AA10 92 102 rplM 50S ribosomal protein L13 yes yes 3 1.6667E-07 104.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 205990000 9208900 6991600 43099000 49305000 11591000 14780000 26889000 44125000 3167 182 3450 18843;18844;18845;18846;18847;18848;18849;18850 14181;14182;14183;14184;14185 14185 5 141490000 106620000 366210000 373810000 178460000 224020000 206940000 253220000 MIDKSAFVHPTAIVEE ______________________________ IDKSAFVHPTAIVEEGASIGANAHIGPFCI - M I E E G 2 0 0 1 0 0 2 0 1 2 0 1 1 1 1 1 1 0 0 2 0 0 16 1 1 3 1785.8971 P0A722 P0A722 1 16 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 3 1.0712E-15 89.541 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 1 2 146870000 11190000 16268000 22303000 11932000 14271000 19428000 14211000 37264000 3168 92 3451;3452 18851;18852;18853;18854;18855;18856;18857;18858;18859;18860 14186;14187;14188;14189 14188 101 4 171930000 248090000 189510000 90463000 219720000 294460000 109370000 213850000 MIESNLR FARRALRGDVASRRRMIESNLRLVVKIARR GDVASRRRMIESNLRLVVKIARRYGNRGLA R M I L R L 0 1 1 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 7 0 1 0 861.43784 P13445 P13445 94 100 rpoS RNA polymerase sigma factor RpoS yes yes 2 0.0032726 73.039 By MS/MS By MS/MS By MS/MS 2 1 1 29873000 0 12545000 0 0 9325500 8002400 0 0 3169 279 3453 18861;18862;18863;18864 14190;14191;14192 14190 3 0 17938000 0 0 11249000 8864900 0 0 MIGLVGK ______________________________ ______________________________ - M I G K K 0 0 0 0 0 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 0 0 7 0 0 0 716.42548 P60438 P60438 1 7 rplC 50S ribosomal protein L3 yes yes 2 0.0019805 71.359 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 178480000 52913000 44432000 0 0 38218000 42912000 0 0 3170 380 3454;3455 18865;18866;18867;18868;18869;18870;18871;18872 14193;14194;14195;14196;14197;14198;14199;14200 14194 303 8 52913000 45481000 0 0 46102000 47537000 0 0 MIGLVGKK ______________________________ ______________________________ - M I K K V 0 0 0 0 0 0 0 2 0 1 1 2 1 0 0 0 0 0 0 1 0 0 8 1 0 0 844.52044 P60438 P60438 1 8 rplC 50S ribosomal protein L3 yes yes 2 0.0091887 54.571 By MS/MS By MS/MS By matching By matching 1 1 1 1 16165000 6479800 6772600 0 0 1318200 1594100 0 0 3171 380 3456 18873;18874;18875;18876 14201;14202 14202 2 6479800 6932400 0 0 1590100 1765900 0 0 MIGLVGKKVGMTRIFTE ______________________________ GLVGKKVGMTRIFTEDGVSIPVTVIEVEAN - M I T E D 0 1 0 0 0 0 1 3 0 2 1 2 2 1 0 0 2 0 0 2 0 0 17 3 0 0 1879.0423 P60438 P60438 1 17 rplC 50S ribosomal protein L3 yes yes 3 5.8645E-05 53.828 By MS/MS By matching By MS/MS 1 1 1 17030000 0 0 3682900 5466200 0 0 0 7881300 3172 380 3457 18877;18878;18879 14203 14203 303;304 1 0 0 31293000 41442000 0 0 0 45229000 MIIYLHGFDSNSP ______________________________ ______________________________ - M I S P G 0 0 1 1 0 0 0 1 1 2 1 0 1 1 1 2 0 0 1 0 0 0 13 0 0 0 1492.7021 P0A8E1 P0A8E1 1 13 ycfP UPF0227 protein YcfP yes yes 2 7.1095E-141 219.51 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 73776000 3191100 3438700 0 0 33980000 33167000 0 0 3173 143 3458;3459 18880;18881;18882;18883;18884;18885;18886;18887 14204;14205;14206;14207;14208;14209;14210 14207 136 6 19263000 20581000 0 0 48376000 47279000 0 0 MIIYLHGFDSNSPGNHE ______________________________ IYLHGFDSNSPGNHEKVLQLQFIDPDVRLI - M I H E K 0 0 2 1 0 0 1 2 2 2 1 0 1 1 1 2 0 0 1 0 0 0 17 0 0 1 1929.8679 P0A8E1 P0A8E1 1 17 ycfP UPF0227 protein YcfP yes yes 2;3 2.1956E-31 108.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 2 2 1 331300000 29655000 41016000 32722000 66329000 31326000 46283000 60776000 23197000 3174 143 3460;3461 18888;18889;18890;18891;18892;18893;18894;18895;18896;18897;18898;18899;18900;18901;18902;18903;18904;18905 14211;14212;14213;14214;14215;14216;14217;14218;14219;14220;14221;14222;14223 14222 136 13 455640000 625490000 278040000 502880000 448410000 701490000 467740000 133130000 MIIYLHGFDSNSPGNHEK ______________________________ YLHGFDSNSPGNHEKVLQLQFIDPDVRLIS - M I E K V 0 0 2 1 0 0 1 2 2 2 1 1 1 1 1 2 0 0 1 0 0 0 18 0 1 1 2057.9629 P0A8E1 P0A8E1 1 18 ycfP UPF0227 protein YcfP yes yes 2;3;4 0 218.83 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 2356800000 707810000 614400000 0 0 460040000 574560000 0 0 3175 143 3462;3463 18906;18907;18908;18909;18910;18911;18912;18913;18914;18915;18916;18917;18918;18919;18920;18921 14224;14225;14226;14227;14228;14229;14230;14231;14232;14233;14234;14235;14236;14237 14228 136 14 707810000 628900000 0 0 554950000 636490000 0 0 MIKATDRKLVVGLE ______________________________ ______________________________ - M I L E I 1 1 0 1 0 0 1 1 0 1 2 2 1 0 0 0 1 0 0 2 0 0 14 3 0 1 1571.9069 P0ABH0 P0ABH0 1 14 ftsA Cell division protein FtsA yes yes 3 0.0021567 44.616 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 40020000 5779100 5957700 5924000 0 4445200 3606300 0 14308000 3176 199 3464 18922;18923;18924;18925;18926;18927 14238 14238 1 88795000 90856000 50336000 0 68438000 54659000 0 82110000 MIKVLIVDDE ______________________________ ______________________________ - M I D E P 0 0 0 2 0 0 1 0 0 2 1 1 1 0 0 0 0 0 0 2 0 0 10 1 0 0 1173.6315 P0AFT5 P0AFT5 1 10 yehT Transcriptional regulatory protein YehT yes yes 2 0.006609 30.57 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 12634000 4823600 0 0 0 3229000 2587100 0 1994600 3177 250 3465 18928;18929;18930;18931 14239 14239 224 1 74114000 0 0 0 49713000 39212000 0 11447000 MILSLPVTNPDVPHAGR MSIEEGQRLTDDCARMILSLPVTNPDVPHA LSLPVTNPDVPHAGRRALLFGRRSGENA__ R M I G R R 1 1 1 1 0 0 0 1 1 1 2 0 1 0 3 1 1 0 0 2 0 0 17 0 0 4 1815.9665 P0AAN1 P0AAN1 133 149 hybE Hydrogenase-2 operon protein HybE yes yes 3 0.0002733 53.169 By MS/MS 1 5990500 5990500 0 0 0 0 0 0 0 3178 186 3466 18932 14240 14240 1 5990500 0 0 0 0 0 0 0 MILSYLNQGDFIGE KGSVAVLIKDEEGKEMILSYLNQGDFIGEL EMILSYLNQGDFIGELGLFEEGQERSAWVR E M I G E L 0 0 1 1 0 1 1 2 0 2 2 0 1 1 0 1 0 0 1 0 0 0 14 0 0 0 1598.765 P0ACJ8 P0ACJ8 60 73 crp cAMP-activated global transcriptional regulator CRP yes yes 2 7.8503E-87 179.1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 71784000 2289600 2698100 0 0 27921000 31099000 0 7776200 3179 213 3467 18933;18934;18935;18936;18937 14241;14242;14243 14242 190 3 35180000 41147000 0 0 429870000 471350000 0 44626000 MINVLKAIKA KAGNKGAEAALTALEMINVLKAIKA_____ LTALEMINVLKAIKA_______________ E M I K A - 2 0 1 0 0 0 0 0 0 2 1 2 1 0 0 0 0 0 0 1 0 0 10 2 0 1 1099.6787 P61714 P61714 147 156 ribE 6,7-dimethyl-8-ribityllumazine synthase yes yes 2;3 6.3519E-05 83.265 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 3 1 1 3 3 49519000 1344800 2486700 11815000 13419000 1279100 2275600 7587600 9310800 3180 387 3468;3469 18938;18939;18940;18941;18942;18943;18944;18945;18946;18947;18948;18949;18950;18951;18952;18953 14244;14245;14246;14247;14248 14245 309 5 20662000 37923000 100390000 101740000 19693000 34489000 58396000 53433000 MIPDADLASLMK QLIRHRCAALVVHAKMIPDADLASLMKQMP HAKMIPDADLASLMKQMPGMVLINRILPGF K M I M K Q 2 0 0 2 0 0 0 0 0 1 2 1 2 0 1 1 0 0 0 0 0 0 12 0 0 3 1303.6516 P03024 P03024 125 136 galR HTH-type transcriptional regulator GalR yes yes 2 0.016311 39.917 By MS/MS 1 5958000 0 5958000 0 0 0 0 0 0 3181 42 3470 18954 14249 14249 1 0 6098700 0 0 0 0 0 0 MIPDNSLR NLRVMCHDAVEVLHKMIPDNSLRMVQLFFP AVEVLHKMIPDNSLRMVQLFFPDPWHKARH K M I L R M 0 1 1 1 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 8 0 0 1 944.47495 P0A8I5 P0A8I5 129 136 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 5.3034E-25 144.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 457220000 154180000 108250000 0 0 101530000 93257000 0 0 3182 144 3471;3472 18955;18956;18957;18958;18959;18960;18961;18962 14250;14251;14252;14253;14254;14255;14256;14257;14258 14257 139 9 154180000 110810000 0 0 122470000 103310000 0 0 MIPGFEDGIK GGKASDFVLAMGQGRMIPGFEDGIKGHKAG MGQGRMIPGFEDGIKGHKAGEEFTIDVTFP R M I I K G 0 0 0 1 0 0 1 2 0 2 0 1 1 1 1 0 0 0 0 0 0 0 10 0 1 1 1105.5478 P0A850 P0A850 194 203 tig Trigger factor yes yes 2 0.0032918 60.436 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38248000 11688000 8821400 0 0 8859100 8879100 0 0 3183 137 3473 18963;18964;18965;18966 14259;14260;14261;14262 14260 4 11688000 9029600 0 0 10687000 9836100 0 0 MIQEQTMLNVADNSGAR ______________________________ QEQTMLNVADNSGARRVMCIKVLGGSHRRY - M I A R R 2 1 2 1 0 2 1 1 0 1 1 0 2 0 0 1 1 0 0 1 0 0 17 0 1 2 1876.8771 P0ADY3 P0ADY3 1 17 rplN 50S ribosomal protein L14 yes yes 2;3 0 303.04 By MS/MS By MS/MS By MS/MS By MS/MS 6 7 7 7 2700500000 691280000 678560000 0 0 637020000 693640000 0 0 3184 228 3474;3475;3476 18967;18968;18969;18970;18971;18972;18973;18974;18975;18976;18977;18978;18979;18980;18981;18982;18983;18984;18985;18986;18987;18988;18989;18990;18991;18992;18993 14263;14264;14265;14266;14267;14268;14269;14270;14271;14272;14273;14274;14275;14276;14277;14278;14279;14280;14281;14282;14283;14284;14285;14286;14287 14283 206;207 23 691280000 694570000 0 0 768440000 768390000 0 0 MIRHAGNSGTRE FSLEGGDALIPMLKEMIRHAGNSGTREVVL LKEMIRHAGNSGTREVVLGMAHRGRLNVLV E M I R E V 1 2 1 0 0 0 1 2 1 1 0 0 1 0 0 1 1 0 0 0 0 0 12 2 0 1 1327.6415 P0AFG3 P0AFG3 242 253 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 4.2813E-08 66.498 By matching By MS/MS By MS/MS 1 1 1 20782000 0 0 6469600 11159000 0 0 3154000 0 3185 246 3477 18994;18995;18996 14288 14288 1 0 0 54972000 84601000 0 0 24274000 0 MKDIDTLISNNALWSK ______________________________ KDIDTLISNNALWSKMLVEEDPGFFEKLAQ - M K S K M 1 0 2 2 0 0 0 0 0 2 2 2 1 0 0 2 1 1 0 0 0 0 16 1 0 1 1847.9451 P61517 P61517 1 16 can Carbonic anhydrase 2 yes yes 2;3 3.3292E-98 216.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 3 3 585720000 166220000 133790000 855000 0 148610000 136240000 0 0 3186 386 3478;3479 18997;18998;18999;19000;19001;19002;19003;19004;19005;19006;19007;19008;19009 14289;14290;14291;14292;14293;14294;14295;14296;14297;14298;14299;14300;14301;14302;14303;14304 14298 307 16 166220000 136950000 7264800 0 179270000 150930000 0 0 MKDLRNVSTGDVNVE LTEELAYLKKNHEEEMKDLRNVSTGDVNVE MKDLRNVSTGDVNVEMNAAPGVDLTQLLNN E M K V E M 0 1 2 2 0 0 1 1 0 0 1 1 1 0 0 1 1 0 0 3 0 0 15 2 0 0 1675.8199 CON__P13645 CON__P13645 291 305 yes yes 3 0.00023118 58.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 262190000 33400000 26419000 21630000 29961000 29825000 22188000 44164000 54599000 + 3187 12 3480;3481 19010;19011;19012;19013;19014;19015;19016;19017;19018;19019;19020;19021;19022;19023;19024;19025 14305;14306;14307;14308;14309;14310;14311;14312;14313 14311 13 9 513180000 402890000 183790000 227150000 459190000 336290000 339900000 313330000 MKKDIHPKYEE ______________________________ ______________________________ - M K E E I 0 0 0 1 0 0 2 0 1 1 0 3 1 0 1 0 0 0 1 0 0 0 11 3 1 1 1416.7071 P0A7M9 P0A7M9 1 11 rpmE 50S ribosomal protein L31 yes yes 3 2.0445E-06 93.345 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 1 2 366540000 17932000 11054000 59840000 72257000 10820000 18915000 48678000 127050000 3188 115 3482;3483 19026;19027;19028;19029;19030;19031;19032;19033;19034;19035;19036 14314;14315;14316;14317;14318;14319;14320;14321 14317 8 275520000 168580000 508450000 547820000 166590000 286680000 374640000 729090000 MKLDEIAR ______________________________ ______________________________ - M K A R L 1 1 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 8 1 1 1 974.5219 P0ACP1 P0ACP1 1 8 cra Catabolite repressor/activator yes yes 2 6.3303E-06 116.88 By MS/MS By matching By matching By matching 1 1 1 1 42462000 11350000 14973000 0 0 6720400 9418700 0 0 3189 217 3484 19037;19038;19039;19040 14322 14322 1 11350000 15327000 0 0 8106800 10434000 0 0 MKLPVRE ______________________________ ______________________________ - M K R E F 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 1 0 0 7 2 0 1 871.49496 P0AC41 P0AC41 1 7 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.0025163 100.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 414850000 57284000 39156000 74980000 80394000 22893000 22792000 35909000 81448000 3190 203 3485 19041;19042;19043;19044;19045;19046;19047;19048 14323;14324;14325;14326;14327;14328 14324 6 880150000 597130000 637090000 609510000 352460000 345440000 276370000 467420000 MKNDVISP ______________________________ ______________________________ - M K S P E 0 0 1 1 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 8 1 0 0 902.45315 P0A8I5 P0A8I5 1 8 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 0.00374 79.116 By MS/MS By MS/MS 1 1 42057000 0 0 0 0 26599000 15458000 0 0 3191 144 3486 19049;19050 14329 14329 1 0 0 0 0 37869000 22035000 0 0 MKNDVISPE ______________________________ ______________________________ - M K P E F 0 0 1 1 0 0 1 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 9 1 0 1 1031.4957 P0A8I5 P0A8I5 1 9 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 0.00016054 95.909 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 2 2 2 278460000 26260000 24505000 43301000 53197000 15704000 15076000 40823000 59596000 3192 144 3487;3488 19051;19052;19053;19054;19055;19056;19057;19058;19059;19060;19061;19062;19063;19064;19065;19066;19067 14330;14331;14332;14333;14334;14335;14336;14337 14332 140 8 403480000 373710000 367930000 403310000 232840000 228500000 314180000 342010000 MKNDVISPEFDE ______________________________ ______________________________ - M K D E N 0 0 1 2 0 0 2 0 0 1 0 1 1 1 1 1 0 0 0 1 0 0 12 1 1 1 1422.6337 P0A8I5 P0A8I5 1 12 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 1.4832E-05 70.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 64455000 0 0 14337000 18301000 2111200 0 12441000 17265000 3193 144 3489;3490 19068;19069;19070;19071;19072;19073;19074;19075;19076 14338;14339;14340;14341;14342;14343;14344 14343 140 7 0 0 121820000 138750000 32503000 0 95747000 99083000 MKNDVISPEFDENGRPLR ______________________________ DVISPEFDENGRPLRRIRSFVRRQGRLTKG - M K L R R 0 2 2 2 0 0 2 1 0 1 1 1 1 1 2 1 0 0 0 1 0 0 18 2 2 2 2116.0371 P0A8I5 P0A8I5 1 18 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3;4 5.6632E-05 66.965 By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 36045000 18086000 4519000 0 0 5636300 7803600 0 0 3194 144 3491;3492 19077;19078;19079;19080;19081 14345;14346 14346 140 2 18086000 4625700 0 0 6799000 8644700 0 0 MKNIIRTPE ______________________________ ______________________________ - M K P E T 0 1 1 0 0 0 1 0 0 2 0 1 1 0 1 0 1 0 0 0 0 0 9 2 0 1 1100.6012 P31979 P31979 1 9 nuoF NADH-quinone oxidoreductase subunit F yes yes 3 0.01687 50.805 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 45196000 3417900 4356500 13576000 13125000 2709500 3427000 0 4584000 3195 336 3493 19082;19083;19084;19085;19086;19087;19088 14347;14348;14349 14349 3 52515000 66437000 115360000 99506000 41715000 51941000 0 26307000 MKNKLPPFIE ______________________________ ______________________________ - M K I E I 0 0 1 0 0 0 1 0 0 1 1 2 1 1 2 0 0 0 0 0 0 0 10 2 0 2 1215.6686 P23908 P23908 1 10 argE Acetylornithine deacetylase yes yes 2;3 8.0048E-05 83.206 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 2 2 152870000 10339000 10786000 32467000 38416000 8733500 6575400 18216000 27333000 3196 308 3494 19089;19090;19091;19092;19093;19094;19095;19096;19097;19098;19099;19100;19101;19102;19103 14350;14351;14352;14353;14354;14355;14356 14356 5 158860000 164490000 275870000 291250000 134460000 99660000 140200000 156860000 MKPFIFGAR AGVHFGHQTRYWNPKMKPFIFGARNKVHII RYWNPKMKPFIFGARNKVHIINLEKTVPMF K M K A R N 1 1 0 0 0 0 0 1 0 1 0 1 1 2 1 0 0 0 0 0 0 0 9 1 0 2 1065.5794 P0A7V0 P0A7V0 27 35 rpsB 30S ribosomal protein S2 yes yes 2;3 0.0013639 94.262 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 371400000 114870000 104600000 0 0 80467000 71465000 0 0 3197 128 3495;3496 19104;19105;19106;19107;19108;19109;19110;19111;19112;19113;19114;19115;19116;19117;19118;19119 14357;14358;14359;14360;14361;14362;14363;14364;14365;14366;14367;14368;14369 14364 124 13 114870000 107070000 0 0 97068000 79167000 0 0 MKQDLAR ______________________________ ______________________________ - M K A R I 1 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 7 1 0 1 860.45382 P0A8P8 P0A8P8 1 7 xerD Tyrosine recombinase XerD yes yes 2 6.7207E-18 110.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61413000 23335000 27141000 0 0 6128500 4807800 0 0 3198 151 3497 19120;19121;19122;19123 14370;14371;14372;14373 14373 0 23335000 27782000 0 0 7392900 5326000 0 0 MKQPGEELQETLTELDDR ______________________________ PGEELQETLTELDDRAVVDYLIKNPEFFIR - M K D R A 0 1 0 2 0 2 4 1 0 0 3 1 1 0 1 0 2 0 0 0 0 0 18 1 4 1 2131.0103 P23305 P23305 1 18 yigA Uncharacterized protein YigA yes yes 3 8.4438E-08 75.548 By MS/MS By MS/MS By MS/MS 1 1 1 19602000 8783000 4472000 0 0 0 6347000 0 0 3199 301 3498 19124;19125;19126 14374;14375;14376 14374 3 8783000 4577500 0 0 0 7031100 0 0 MKQTQRHNGIIE ______________________________ ______________________________ - M K I E L 0 1 1 0 0 2 1 1 1 2 0 1 1 0 0 0 1 0 0 0 0 0 12 2 0 0 1453.746 P0ACL0 P0ACL0 1 12 glpR Glycerol-3-phosphate regulon repressor yes yes 2;3 0.0051685 43.897 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 2 2 1 2 2 360220000 24007000 33865000 78383000 98037000 15218000 605220 43149000 66952000 3200 215 3499;3500 19127;19128;19129;19130;19131;19132;19133;19134;19135;19136;19137;19138;19139;19140;19141 14377;14378;14379;14380 14378 198 3 368860000 516450000 666010000 743270000 234300000 9173000 332080000 384230000 MKTALLLEKLE ______________________________ ______________________________ - M K L E G 1 0 0 0 0 0 2 0 0 0 4 2 1 0 0 0 1 0 0 0 0 0 11 2 1 1 1287.7472 P23862 P23862 1 11 priC Primosomal replication protein N yes yes 2 0.0025289 38.293 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 0 0 0 0 0 0 0 0 0 3201 307 3501 19142;19143;19144;19145;19146 14381;14382 14382 254 62 0 0 0 0 0 0 0 0 0 MKTFTAKPE ______________________________ ______________________________ - M K P E T 1 0 0 0 0 0 1 0 0 0 0 2 1 1 1 0 2 0 0 0 0 0 9 2 0 2 1051.5372 P0AA10 P0AA10 1 9 rplM 50S ribosomal protein L13 yes yes 2;3 0.00032527 103.55 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 2 3 3 1 3 520350000 51914000 61016000 18376000 61834000 47846000 57574000 44275000 177520000 3202 182 3502;3503 19147;19148;19149;19150;19151;19152;19153;19154;19155;19156;19157;19158;19159;19160;19161;19162;19163;19164;19165 14383;14384;14385;14386;14387;14388;14389;14390;14391;14392;14393;14394 14391 173 11 797640000 930500000 156140000 468800000 736630000 872610000 340750000 1018700000 MKTFTAKPETVK ______________________________ ______________________________ - M K V K R 1 0 0 0 0 0 1 0 0 0 0 3 1 1 1 0 3 0 0 1 0 0 12 2 1 2 1379.7483 P0AA10 P0AA10 1 12 rplM 50S ribosomal protein L13 yes yes 3 1.8675E-06 84.169 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49371000 15852000 19421000 0 0 7627900 6469400 0 0 3203 182 3504 19166;19167;19168;19169 14395;14396;14397;14398 14396 173 4 15852000 19880000 0 0 9201500 7166700 0 0 MKTIEVDDE ______________________________ ______________________________ - M K D E L 0 0 0 2 0 0 2 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 9 1 1 0 1078.4852 P0AFY8 P0AFY8 1 9 seqA Negative modulator of initiation of replication yes yes 2 8.3401E-06 92.838 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 2 98561000 0 0 22365000 20516000 792650 0 26520000 28368000 3204 252 3505;3506 19170;19171;19172;19173;19174;19175;19176 14399;14400;14401 14401 226 2 0 0 190030000 155540000 12204000 0 204110000 162800000 MKVAKDLVVSLAYQVR ______________________________ KVAKDLVVSLAYQVRTEDGVLVDESPVSAP - M K V R T 2 1 0 1 0 1 0 0 0 0 2 2 1 0 0 1 0 0 1 4 0 0 16 2 0 2 1819.039 P0A9K9 P0A9K9 1 16 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 0.00021202 60.918 By MS/MS By MS/MS By MS/MS 1 1 1 19947000 8076000 5468200 0 0 0 6402600 0 0 3205 169 3507 19177;19178;19179 14402;14403;14404 14402 3 8076000 5597300 0 0 0 7092700 0 0 MKVAKDLVVSLAYQVRTE ______________________________ AKDLVVSLAYQVRTEDGVLVDESPVSAPLD - M K T E D 2 1 0 1 0 1 1 0 0 0 2 2 1 0 0 1 1 0 1 4 0 0 18 3 0 2 2049.1292 P0A9K9 P0A9K9 1 18 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3;4 1.1376E-28 113.86 By matching By MS/MS By MS/MS By MS/MS 1 3 5 5 655060000 760180 2253600 0 0 313860000 338190000 0 0 3206 169 3508;3509 19180;19181;19182;19183;19184;19185;19186;19187;19188;19189;19190;19191;19192;19193 14405;14406;14407;14408;14409;14410;14411;14412;14413;14414;14415;14416;14417;14418;14419;14420;14421;14422 14406 162 18 11680000 34367000 0 0 4832100000 5125700000 0 0 MKVDEMVTVR LDYANFPKITLIENKMKVDEMVTVRDITLT LIENKMKVDEMVTVRDITLTSTCEHHFVTI K M K V R D 0 1 0 1 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 3 0 0 10 1 1 0 1206.6101 P0A6T5 P0A6T5 94 103 folE GTP cyclohydrolase 1 yes yes 3 0.015231 32.254 By MS/MS 2 11474000 0 0 0 0 11474000 0 0 0 3207 81 3510 19194;19195 14423 14423 1 0 0 0 0 14040000 0 0 0 MLAAYAG SPFAANALGKLAAQEMLAAYAG________ LGKLAAQEMLAAYAG_______________ E M L A G - 3 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 7 0 0 3 695.33125 P31658 P31658 277 283 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 1 0.0080286 69.641 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 156380000 11761000 12661000 29436000 28534000 11926000 11191000 24127000 26744000 3208 335 3511 19196;19197;19198;19199;19200;19201;19202;19203 14424;14425 14425 1 180710000 193080000 250110000 216330000 183610000 169610000 185690000 153480000 MLAESEPR PVLHNRISNDALKAKMLAESEPRTTISFYK NDALKAKMLAESEPRTTISFYKYFHIADPK K M L P R T 1 1 0 0 0 0 2 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 8 0 2 2 931.44332 P24188 P24188 17 24 yceA UPF0176 protein YceA yes yes 2 0.0026243 79.116 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21577000 5942200 6917700 0 0 3767800 4949400 0 0 3209 310 3512 19204;19205;19206;19207 14426;14427;14428;14429 14426 4 5942200 7081000 0 0 4545100 5482900 0 0 MLDMGFIHDIR KLDQVEILVLDEADRMLDMGFIHDIRRVLT EADRMLDMGFIHDIRRVLTKLPAKRQNLLF R M L I R R 0 1 0 2 0 0 0 1 1 2 1 0 2 1 0 0 0 0 0 0 0 0 11 0 0 0 1346.6475 P25888 P25888 161 171 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 1.5795E-12 125.48 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 612920000 172270000 143550000 0 0 149420000 147680000 0 0 3210 318 3513;3514 19208;19209;19210;19211;19212;19213;19214;19215;19216;19217;19218;19219;19220;19221;19222;19223 14430;14431;14432;14433;14434;14435;14436;14437;14438;14439;14440;14441;14442;14443;14444 14441 266;267 15 172270000 146930000 0 0 180250000 163600000 0 0 MLDTNMK ______________________________ ______________________________ - M L M K T 0 0 1 1 0 0 0 0 0 0 1 1 2 0 0 0 1 0 0 0 0 0 7 0 0 0 851.38811 P35340 P35340 1 7 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 3.0995E-34 159.19 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 487380000 128390000 123610000 0 0 115960000 119410000 0 0 3211 348 3515;3516 19224;19225;19226;19227;19228;19229;19230;19231;19232;19233;19234 14445;14446;14447;14448;14449;14450;14451;14452;14453 14453 283;284 9 128390000 126530000 0 0 139880000 132280000 0 0 MLDTNMKTQLKAYLE ______________________________ MLDTNMKTQLKAYLEKLTKPVELIATLDDS - M L L E K 1 0 1 1 0 1 1 0 0 0 3 2 2 0 0 0 2 0 1 0 0 0 15 2 0 1 1797.9005 P35340 P35340 1 15 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 6.2844E-17 105.17 By matching By matching By MS/MS By MS/MS By MS/MS 1 1 3 3 1 300090000 0 0 1041100 1482300 136360000 155770000 0 5440700 3212 348 3517;3518 19235;19236;19237;19238;19239;19240;19241;19242;19243 14454;14455;14456;14457;14458;14459 14459 283;284 6 0 0 8846200 11239000 2099300000 2360900000 0 31223000 MLEAQGFR AYVDHPSFGMAICGRMLEAQGFRVGIIAQP GMAICGRMLEAQGFRVGIIAQPDWSSKDDF R M L F R V 1 1 0 0 0 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 1 1 950.46439 Q46861 Q46861 69 76 ygiQ UPF0313 protein YgiQ yes yes 2 5.2804E-05 110.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33838000 8464800 10223000 0 0 7074300 8076300 0 0 3213 441 3519 19244;19245;19246;19247 14460;14461;14462;14463;14464 14461 5 8464800 10464000 0 0 8533800 8946800 0 0 MLEDQNLISAHGK QIVGCSRETVGRILKMLEDQNLISAHGKTI LKMLEDQNLISAHGKTIVVYGTR_______ K M L G K T 1 0 1 1 0 1 1 1 1 1 2 1 1 0 0 1 0 0 0 0 0 0 13 0 1 1 1454.7188 P0ACJ8 P0ACJ8 190 202 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3 4.9774E-210 244.95 By MS/MS By MS/MS By MS/MS By MS/MS 8 6 6 6 21351000000 5780100000 6732400000 0 0 4632000000 4206500000 0 0 3214 213 3520;3521 19248;19249;19250;19251;19252;19253;19254;19255;19256;19257;19258;19259;19260;19261;19262;19263;19264;19265;19266;19267;19268;19269;19270;19271;19272;19273 14465;14466;14467;14468;14469;14470;14471;14472;14473;14474;14475;14476;14477;14478;14479;14480;14481;14482;14483;14484;14485;14486;14487;14488;14489 14466 191 25 5834700000 6908400000 0 0 5638800000 4698400000 0 0 MLEDQNLISAHGKTIVVYGTR QIVGCSRETVGRILKMLEDQNLISAHGKTI LISAHGKTIVVYGTR_______________ K M L T R - 1 1 1 1 0 1 1 2 1 2 2 1 1 0 0 1 2 0 1 2 0 0 21 1 1 1 2344.2209 P0ACJ8 P0ACJ8 190 210 crp cAMP-activated global transcriptional regulator CRP yes yes 4 2.6368E-05 45.369 By MS/MS By matching 1 1 11374000 0 6003800 0 0 0 5369900 0 0 3215 213 3522 19274;19275 14490 14490 1 0 6145500 0 0 0 5948600 0 0 MLEEISSVK LWGPAHGGANEAALKMLEEISSVKHIPEFV NEAALKMLEEISSVKHIPEFVRRAKDKNDS K M L V K H 0 0 0 0 0 0 2 0 0 1 1 1 1 0 0 2 0 0 0 1 0 0 9 0 2 0 1034.5318 P0ABH7 P0ABH7 275 283 gltA Citrate synthase yes yes 2 0.0045054 59.35 By MS/MS 1 51343000 0 51343000 0 0 0 0 0 0 3216 200 3523 19276 14491 14491 1 0 52554000 0 0 0 0 0 0 MLIADGIDPNE AEVEERTRKLQQYREMLIADGIDPNELLNS QYREMLIADGIDPNELLNSLAAVKSGTKAK E M L N E L 1 0 1 2 0 0 1 1 0 2 1 0 1 0 1 0 0 0 0 0 0 0 11 0 0 2 1186.554 P0ACF8 P0ACF8 64 74 hns DNA-binding protein H-NS yes yes 1;2 1.13E-06 88.177 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 2 2 3 3 1234800000 15663000 15850000 411220000 292320000 9257800 9203100 270940000 210350000 3217 210 3524;3525 19277;19278;19279;19280;19281;19282;19283;19284;19285;19286;19287;19288;19289;19290;19291;19292;19293;19294;19295;19296 14492;14493;14494;14495;14496;14497 14496 185 6 240660000 241720000 3494100000 2216300000 142530000 139490000 2085200000 1207100000 MLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE AEVEERTRKLQQYREMLIADGIDPNELLNS AKRAQRPAKYSYVDENGETKTWTGQGRTPA E M L D E N 6 2 2 3 0 1 2 2 0 2 4 4 1 0 2 3 1 0 2 2 0 0 39 6 1 8 4232.2263 P0ACF8 P0ACF8 64 102 hns DNA-binding protein H-NS yes yes 5;6 4.3396E-25 94.949 By MS/MS By MS/MS 2 2 108070000 0 0 0 0 52992000 55083000 0 0 3218 210 3526 19297;19298;19299;19300 14498;14499;14500;14501;14502 14501 5 0 0 0 0 815860000 834860000 0 0 MLLASFE IGNPENEASIEELGEMLLASFEKHPLRHHF ASIEELGEMLLASFEKHPLRHHFPPFAGFR E M L F E K 1 0 0 0 0 0 1 0 0 0 2 0 1 1 0 1 0 0 0 0 0 0 7 0 0 1 809.39933 P77398 P77398 580 586 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 1 1.2158E-35 148.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 3 2 2 2 740900000 127940000 121090000 141090000 23584000 100130000 84628000 58307000 84119000 3219 432 3527;3528 19301;19302;19303;19304;19305;19306;19307;19308;19309;19310;19311;19312;19313;19314;19315;19316 14503;14504;14505;14506 14505 333 3 1965800000 1846700000 1198800000 178800000 1518100000 1282700000 448740000 482750000 MLMPEDK QEMGREPTPEELAERMLMPEDKIRKVLKIA TPEELAERMLMPEDKIRKVLKIAKEPISME R M L D K I 0 0 0 1 0 0 1 0 0 0 1 1 2 0 1 0 0 0 0 0 0 0 7 0 1 1 862.39286 P00579 P00579 487 493 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0015866 94.407 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 1 319720000 99394000 100080000 0 0 62075000 58165000 0 0 3220 27 3529;3530 19317;19318;19319;19320;19321;19322;19323;19324;19325;19326 14507;14508;14509;14510;14511;14512;14513;14514;14515 14509 58;59 8 99394000 102440000 0 0 74881000 64434000 0 0 MLMPEDKIR QEMGREPTPEELAERMLMPEDKIRKVLKIA EELAERMLMPEDKIRKVLKIAKEPISMETP R M L I R K 0 1 0 1 0 0 1 0 0 1 1 1 2 0 1 0 0 0 0 0 0 0 9 1 1 1 1131.578 P00579 P00579 487 495 rpoD RNA polymerase sigma factor RpoD yes yes 3 0.012122 37.344 By MS/MS By matching 1 1 9400600 4512000 4888600 0 0 0 0 0 0 3221 27 3531 19327;19328 14516 14516 1 4512000 5004000 0 0 0 0 0 0 MLNPIVR ______________________________ ______________________________ - M L V R K 0 1 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 7 0 0 1 841.48439 P05055 P05055 1 7 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0024349 93.593 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38514000 10444000 7734500 0 0 8366100 11970000 0 0 3222 48 3532 19329;19330;19331;19332 14517;14518;14519;14520 14518 4 10444000 7917000 0 0 10092000 13260000 0 0 MLNQLDNLTER ______________________________ ______________________________ - M L E R V 0 1 2 1 0 1 1 0 0 0 3 0 1 0 0 0 1 0 0 0 0 0 11 0 1 0 1345.666 P0AFX4 P0AFX4 1 11 rsd Regulator of sigma D yes yes 2 2.0981E-95 220.45 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 3 446770000 142310000 132380000 0 0 77388000 94698000 0 0 3223 251 3533;3534;3535 19333;19334;19335;19336;19337;19338;19339;19340;19341;19342;19343 14521;14522;14523;14524;14525;14526;14527;14528;14529 14527 225 9 142310000 135500000 0 0 93353000 104900000 0 0 MLQEAVDALLDNGRR LDLAAPDIIVRNEKRMLQEAVDALLDNGRR MLQEAVDALLDNGRRGRAITGSNKRPLKSL R M L R R G 2 2 1 2 0 1 1 1 0 0 3 0 1 0 0 0 0 0 0 1 0 0 15 1 1 2 1699.8676 P0A8T7 P0A8T7 298 312 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 0.0058425 32.734 By MS/MS By MS/MS By matching By matching 1 1 1 1 10078000 3571300 2390400 0 0 1321700 2794200 0 0 3224 153 3536 19344;19345;19346;19347 14530 14530 1 3571300 2446800 0 0 1594400 3095300 0 0 MLQHFIK PMKDGVIADFFVTEKMLQHFIKQVHSNSFM ADFFVTEKMLQHFIKQVHSNSFMRPSPRVL K M L I K Q 0 0 0 0 0 1 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 7 0 0 0 915.50004 P0A9X4 P0A9X4 90 96 mreB Rod shape-determining protein MreB yes yes 2 0.0059233 46.351 By MS/MS 1 0 0 0 0 0 0 0 0 0 3225 180 3537 19348 14531 14531 1 0 0 0 0 0 0 0 0 MLQMLTLEE ______________________________ ______________________________ - M L E E W 0 0 0 0 0 1 2 0 0 0 3 0 2 0 0 0 1 0 0 0 0 0 9 0 1 0 1106.5352 P75970 P75970 1 9 xisE Excisionase-like protein from lambdoid prophage 14 yes yes 2 0.0052414 40.268 By MS/MS By MS/MS 1 1 28549000 0 0 0 0 0 0 12592000 15957000 3226 413 3538 19349;19350 14532 14532 318;319 1 0 0 0 0 0 0 96910000 91574000 MLTLSDGHLHGGVGHE MATHDINLISRRSYRMLTLSDGHLHGGVGH LTLSDGHLHGGVGHE_______________ R M L H E - 0 0 0 1 0 0 1 4 3 0 3 0 1 0 0 1 1 0 0 1 0 0 16 0 0 0 1658.7835 P0A9R7 P0A9R7 207 222 ftsE Cell division ATP-binding protein FtsE yes yes 3 1.2821E-45 148.68 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 261670000 79938000 63069000 0 0 52961000 65699000 0 0 3227 174 3539;3540 19351;19352;19353;19354;19355;19356;19357;19358 14533;14534;14535;14536;14537;14538;14539;14540 14540 166 8 79938000 64558000 0 0 63887000 72779000 0 0 MLTTLIYR ______________________________ ______________________________ - M L Y R S 0 1 0 0 0 0 0 0 0 1 2 0 1 0 0 0 2 0 1 0 0 0 8 0 0 0 1009.563 P75990 P75990 1 8 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 1.9488E-07 119.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31829000 8265600 6507100 0 0 8526200 8530400 0 0 3228 414 3541 19359;19360;19361;19362 14541;14542;14543;14544 14543 4 8265600 6660600 0 0 10285000 9449800 0 0 MLVEEDPGFFEK KDIDTLISNNALWSKMLVEEDPGFFEKLAQ WSKMLVEEDPGFFEKLAQAQKPRFLWIGCS K M L E K L 0 0 0 1 0 0 3 1 0 0 1 1 1 2 1 0 0 0 0 1 0 0 12 0 3 1 1439.6643 P61517 P61517 17 28 can Carbonic anhydrase 2 yes yes 2 5.6845E-36 151.15 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1701100000 471340000 395430000 0 0 384510000 449850000 0 0 3229 386 3542;3543 19363;19364;19365;19366;19367;19368;19369;19370 14545;14546;14547;14548;14549;14550;14551;14552;14553 14547 308 9 471340000 404770000 0 0 463830000 498340000 0 0 MMDAKARQDCVKE LDRKTVALKKVQIFEMMDAKARQDCVKEIG FEMMDAKARQDCVKEIGLLKQLNHPNIIKY E M M K E I 2 1 0 2 1 1 1 0 0 0 0 2 2 0 0 0 0 0 0 1 0 0 13 3 0 2 1580.7109 GST-Nek6 GST-Nek6 312 324 yes yes 3 8.1259E-06 72.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57908000 0 0 0 0 12710000 11911000 11211000 22075000 3230 23 3544 19371;19372;19373;19374 14554;14555;14556 14554 3 0 0 0 0 195690000 180530000 86284000 126680000 MMKPGMGSYDR LKIAPEHTEEGPLSKMMKPGMGSYDRFKEL PLSKMMKPGMGSYDRFKELFDTYSKQAGKE K M M D R F 0 1 0 1 0 0 0 2 0 0 0 1 3 0 1 1 0 0 1 0 0 0 11 1 0 1 1271.5461 Q46861 Q46861 535 545 ygiQ UPF0313 protein YgiQ yes yes 3 0.0083411 36.982 By MS/MS By MS/MS By MS/MS 1 1 1 23550000 9034000 0 0 0 7181800 7334100 0 0 3231 441 3545 19375;19376;19377 14557;14558;14559 14557 3 9034000 0 0 0 8663400 8124500 0 0 MMQLPPWTSHVIVR KGYDAFAEQALAERRMMQLPPWTSHVIVRA RMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ R M M V R A 0 1 0 0 0 1 0 0 1 1 1 0 2 0 2 1 1 1 0 2 0 0 14 0 0 2 1693.8796 P17888 P17888 627 640 priA Primosomal protein N yes yes 3 0.0014855 50.088 By MS/MS By MS/MS By matching By matching 1 1 1 1 16108000 4616200 4455800 0 0 2187000 4849000 0 0 3232 290 3546 19378;19379;19380;19381 14560;14561 14560 2 4616200 4561000 0 0 2638100 5371600 0 0 MMRPGEPPTR DPTNDRLSALVEIYRMMRPGEPPTREAAES VEIYRMMRPGEPPTREAAESLFENLFFSED R M M T R E 0 2 0 0 0 0 1 1 0 0 0 0 2 0 3 0 1 0 0 0 0 0 10 1 1 3 1170.5638 P0A8V2 P0A8V2 369 378 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.0010064 63.073 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28281000 6800400 7638600 0 0 7313300 6528500 0 0 3233 154 3547 19382;19383;19384;19385 14562;14563;14564;14565;14566 14565 5 6800400 7818800 0 0 8822000 7232100 0 0 MMSQAMR IEGEIGDSHMGLAARMMSQAMRKLAGNLKQ SHMGLAARMMSQAMRKLAGNLKQSNTLLIF R M M M R K 1 1 0 0 0 1 0 0 0 0 0 0 3 0 0 1 0 0 0 0 0 0 7 0 0 1 853.36085 P0A7G6 P0A7G6 171 177 recA Protein RecA yes yes 2 0.00011358 112.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21537000 6055100 7992600 0 0 3775500 3713500 0 0 3234 104 3548 19386;19387;19388;19389 14567;14568;14569;14570 14567 4 6055100 8181200 0 0 4554400 4113700 0 0 MNELMALHTGQSLEQIER DIEIHAREILKVKGRMNELMALHTGQSLEQ LMALHTGQSLEQIERDTERDRFLSAPEAVE R M N E R D 1 1 1 0 0 2 3 1 1 1 3 0 2 0 0 1 1 0 0 0 0 0 18 0 3 1 2099.014 P0A6G7 P0A6G7 163 180 clpP ATP-dependent Clp protease proteolytic subunit yes yes 3 8.6917E-31 120.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45307000 12306000 7373800 0 0 13831000 11796000 0 0 3235 69 3549 19390;19391;19392;19393 14571;14572;14573;14574 14573 4 12306000 7547800 0 0 16684000 13068000 0 0 MNIDTRE ______________________________ ______________________________ - M N R E I 0 1 1 1 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 7 1 0 0 877.39637 P0A9K3 P0A9K3 1 7 ybeZ PhoH-like protein yes yes 2 0.020598 58.981 By matching By MS/MS By MS/MS 1 1 1 22745000 0 0 5938000 5725600 0 0 0 11081000 3236 168 3550 19394;19395;19396 14575 14575 1 0 0 50454000 43409000 0 0 0 63593000 MNLFSLCQK LYEMAALQSPFYGDKMNLFSLCQKIEQCDY PFYGDKMNLFSLCQKIEQCDYPPLPGEHYS K M N Q K I 0 0 1 0 1 1 0 0 0 0 2 1 1 1 0 1 0 0 0 0 0 0 9 0 0 0 1139.5467 GST-Nek6 GST-Nek6 483 491 yes yes 2 1.1114E-36 159.2 By MS/MS By MS/MS 2 2 106420000 0 0 0 0 55141000 51277000 0 0 3237 23 3551;3552 19397;19398;19399;19400 14576;14577;14578;14579 14576 8 2 0 0 0 0 66516000 56804000 0 0 MNQNLLVTK ______________________________ ______________________________ - M N T K R 0 0 2 0 0 1 0 0 0 0 2 1 1 0 0 0 1 0 0 1 0 0 9 0 0 0 1059.5747 P00452 P00452 1 9 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes yes 2 1.5744E-05 88.948 By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 10380000 0 6519900 0 0 3860500 0 0 0 3238 26 3553 19401;19402;19403;19404;19405 14580;14581;14582 14582 3 0 23420000 0 0 4657000 0 0 0 MNQTLLSSFGTPFER ______________________________ MNQTLLSSFGTPFERVENALAALREGRGVM - M N E R V 0 1 1 0 0 1 1 1 0 0 2 0 1 2 1 2 2 0 0 0 0 0 15 0 1 1 1726.8349 P0A7J0 P0A7J0 1 15 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 0 289.75 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 631030000 170000000 154740000 0 0 138480000 167810000 0 0 3239 105 3554;3555 19406;19407;19408;19409;19410;19411;19412;19413 14583;14584;14585;14586;14587;14588;14589;14590;14591 14589 116 9 170000000 158390000 0 0 167050000 185890000 0 0 MNQTLLSSFGTPFERVE ______________________________ QTLLSSFGTPFERVENALAALREGRGVMVL - M N V E N 0 1 1 0 0 1 2 1 0 0 2 0 1 2 1 2 2 0 0 1 0 0 17 1 1 1 1954.9459 P0A7J0 P0A7J0 1 17 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 3.1487E-66 159.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 2 2 1 1 406300000 22044000 26607000 16934000 5791200 157740000 160860000 3051000 13271000 3240 105 3556;3557 19414;19415;19416;19417;19418;19419;19420;19421;19422;19423;19424;19425;19426;19427;19428 14592;14593;14594;14595;14596;14597;14598;14599 14599 116 8 338700000 405760000 143880000 43907000 2428600000 2438100000 23481000 76159000 MNTEATHDQNEALTTGAR ______________________________ EATHDQNEALTTGARLRNAREQLGLSQQAV - M N A R L 3 1 2 1 0 1 2 1 1 0 1 0 1 0 0 0 4 0 0 0 0 0 18 0 2 3 1958.8752 P27434 P27434 1 18 rodZ Cytoskeleton protein RodZ yes yes 3 7.266E-31 121.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26723000 6904800 7935900 0 0 6182700 5700100 0 0 3241 324 3558 19429;19430;19431;19432 14600;14601;14602;14603 14600 4 6904800 8123200 0 0 7458300 6314400 0 0 MPLPEPEVPR GVEMTLLRALAFHPRMPLPEPEVPRQSFAP AFHPRMPLPEPEVPRQSFAPVAPTAVMTPT R M P P R Q 0 1 0 0 0 0 2 0 0 0 1 0 1 0 4 0 0 0 0 1 0 0 10 0 2 4 1163.6009 P06710 P06710 363 372 dnaX DNA polymerase III subunit tau yes yes 2 0.00017068 95.358 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 110790000 35737000 28391000 0 0 21162000 25495000 0 0 3242 51 3559 19433;19434;19435;19436 14604;14605;14606;14607 14604 4 35737000 29061000 0 0 25528000 28243000 0 0 MPLPGSVVASVSPDELLK CEMHVIGKIKNHILKMPLPGSVVASVSPDE PGSVVASVSPDELLKTLPKRKG________ K M P L K T 1 0 0 1 0 0 1 1 0 0 3 1 1 0 3 3 0 0 0 3 0 0 18 0 1 4 1837.9859 P76104 P76104 629 646 ydcP Uncharacterized protease YdcP yes yes 2 4.0309E-26 89.959 By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 55311000 21019000 16506000 0 0 7638000 10147000 0 0 3243 416 3560 19437;19438;19439;19440;19441;19442 14608;14609;14610 14609 3 21019000 16896000 0 0 9213800 11241000 0 0 MPMVQKK VSDIDDVILVGGQTRMPMVQKKVAEFFGKE ILVGGQTRMPMVQKKVAEFFGKEPRKDVNP R M P K K V 0 0 0 0 0 1 0 0 0 0 0 2 2 0 1 0 0 0 0 1 0 0 7 1 0 1 860.46122 P0A6Y8 P0A6Y8 346 352 dnaK Chaperone protein DnaK yes yes 2 0.012305 53.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21518000 9678800 10368000 0 0 671860 799620 0 0 3244 86 3561 19443;19444;19445;19446 14611;14612 14612 2 9678800 10613000 0 0 810460 885800 0 0 MPQHDQLHR ______________________________ ______________________________ - M P H R Y 0 1 0 1 0 2 0 0 2 0 1 0 1 0 1 0 0 0 0 0 0 0 9 0 0 1 1160.5509 P0A6Y5 P0A6Y5 1 9 hslO 33 kDa chaperonin yes yes 3 0.010836 35.511 By matching By MS/MS By matching By MS/MS 1 1 1 1 9535000 3188800 3392300 0 0 1597900 1356000 0 0 3245 85 3562 19447;19448;19449;19450 14613 14613 1 3188800 3472400 0 0 1927500 1502200 0 0 MPQPYIK GSDELSQRAPVFQSRMPQPYIKLNPADAAK RAPVFQSRMPQPYIKLNPADAAKLGVNAGT R M P I K L 0 0 0 0 0 1 0 0 0 1 0 1 1 0 2 0 0 0 1 0 0 0 7 0 0 2 875.45751 P33602 P33602 835 841 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.00068119 79.454 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 469140000 61030000 52337000 0 0 315540000 40232000 0 0 3246 345 3563 19451;19452;19453;19454;19455;19456;19457 14614;14615;14616;14617 14616 0 181940000 151090000 0 0 442210000 44568000 0 0 MPSAVGYQPTLAEEMGVLQER RYTLAGTEVSALLGRMPSAVGYQPTLAEEM YQPTLAEEMGVLQERITSTKTGSITSVQAV R M P E R I 2 1 0 0 0 2 3 2 0 0 2 0 2 0 2 1 1 0 1 2 0 0 21 0 3 4 2305.1083 P0ABB4 P0ABB4 262 282 atpD ATP synthase subunit beta yes yes 2;3 3.7059E-09 100.11 By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 31432000 10137000 4092400 0 0 5869000 11333000 0 0 3247 194 3564 19458;19459;19460;19461;19462 14618;14619;14620 14620 2 10137000 4189000 0 0 7079800 12555000 0 0 MPYAHDISTLPPWDESR CLVYGWSAAEDITRRMPYAHDISTLPPWDE YAHDISTLPPWDESRVENPDERVVIQHNWH R M P S R V 1 1 0 2 0 0 1 0 1 1 1 0 1 0 3 2 1 1 1 0 0 0 17 0 1 4 2013.9255 P10902 P10902 410 426 nadB L-aspartate oxidase yes yes 3 0.00049772 47.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31999000 7852200 7325200 0 0 7067000 9754200 0 0 3248 274 3565 19463;19464;19465;19466 14621;14622;14623;14624 14623 4 7852200 7498100 0 0 8525000 10806000 0 0 MQAASGQLQQSHLLK NTELLNLLREQFNLRMQAASGQLQQSHLLK MQAASGQLQQSHLLKQVRRDVARVKTLLNE R M Q L K Q 2 0 0 0 0 4 0 1 1 0 3 1 1 0 0 2 0 0 0 0 0 0 15 0 0 2 1638.8512 P0A7M6 P0A7M6 30 44 rpmC 50S ribosomal protein L29 yes yes 3 2.6472E-15 115.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 58406000 15162000 16951000 0 0 10972000 15322000 0 0 3249 114 3566 19467;19468;19469;19470 14625;14626;14627;14628 14625 4 15162000 17351000 0 0 13235000 16974000 0 0 MQELAQVSQK ETALKGEDKAAIEAKMQELAQVSQKLMEIA AIEAKMQELAQVSQKLMEIAQQQHAQQQTA K M Q Q K L 1 0 0 0 0 3 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 10 0 1 1 1160.586 P0A6Y8 P0A6Y8 588 597 dnaK Chaperone protein DnaK yes yes 2 1.1585E-151 224.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1555100000 421910000 442340000 58478000 49636000 287510000 295260000 0 0 3250 86 3567;3568 19471;19472;19473;19474;19475;19476;19477;19478;19479;19480 14629;14630;14631;14632;14633;14634;14635;14636 14636 96 8 421910000 452780000 496880000 376320000 346830000 327080000 0 0 MQGSVTEFLKPR ______________________________ ______________________________ - M Q P R L 0 1 0 0 0 1 1 1 0 0 1 1 1 1 1 1 1 0 0 1 0 0 12 1 1 1 1391.7231 P0A7Z4 P0A7Z4 1 12 rpoA DNA-directed RNA polymerase subunit alpha yes yes 3 0.0018205 51.875 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41257000 14911000 7060200 0 0 10264000 9022100 0 0 3251 135 3569 19481;19482;19483;19484 14637;14638;14639;14640 14640 4 14911000 7226800 0 0 12382000 9994400 0 0 MQKALKE EMFYLDIQANLESAEMQKALKELGEITRSM QANLESAEMQKALKELGEITRSMKVLGCYP E M Q K E L 1 0 0 0 0 1 1 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 7 2 0 1 846.46332 P0A9J8 P0A9J8 355 361 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 3.8738E-11 125.25 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 3 1 1 321690000 11213000 12006000 68219000 97691000 0 989730 62324000 69243000 3252 166 3570 19485;19486;19487;19488;19489;19490;19491;19492;19493;19494 14641;14642;14643;14644;14645;14646;14647;14648 14645 7 172290000 183090000 579650000 740650000 0 15001000 479660000 397370000 MQLNEELR AKRSVAIALRNRWRRMQLNEELRHEVTPKN LRNRWRRMQLNEELRHEVTPKNILMIGPTG R M Q L R H 0 1 1 0 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 8 0 2 0 1031.507 P0A6H5 P0A6H5 38 45 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 5.1285E-06 98.997 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 21867000 2503500 7275800 0 0 8879300 3208200 0 0 3253 71 3571 19495;19496;19497;19498;19499;19500 14649;14650;14651;14652 14652 4 2503500 7447500 0 0 10711000 3554000 0 0 MQLNSTEISELIK ______________________________ ______________________________ - M Q I K Q 0 0 1 0 0 1 2 0 0 2 2 1 1 0 0 2 1 0 0 0 0 0 13 0 2 0 1504.7807 P0ABB0 P0ABB0 1 13 atpA ATP synthase subunit alpha yes yes 2 2.4077E-07 90.685 By matching By MS/MS By matching By matching 1 1 1 1 22879000 4903500 4370400 0 0 4356800 9247800 0 0 3254 193 3572 19501;19502;19503;19504 14653 14653 1 4903500 4473600 0 0 5255700 10244000 0 0 MQVILLDK ______________________________ ______________________________ - M Q D K V 0 0 0 1 0 1 0 0 0 1 2 1 1 0 0 0 0 0 0 1 0 0 8 0 0 0 958.55214 P0A7R1 P0A7R1 1 8 rplI 50S ribosomal protein L9 yes yes 2 0.0014407 93.429 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50291000 14799000 12162000 0 0 10673000 12657000 0 0 3255 119 3573 19505;19506;19507;19508 14654;14655;14656;14657 14655 4 14799000 12449000 0 0 12875000 14021000 0 0 MQVLHVCSE ______________________________ ______________________________ - M Q S E M 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 0 0 2 0 0 9 0 0 0 1101.4947 P0A6U8 P0A6U8 1 9 glgA Glycogen synthase yes yes 2 0.00038802 89.142 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 36228000 4196800 3048200 8659700 6136600 3865700 3206100 0 7115300 3256 83 3574 19509;19510;19511;19512;19513;19514;19515 14658;14659;14660;14661;14662 14659 5 64482000 46486000 73580000 46525000 59516000 48593000 0 40834000 MRHPLVMGNWK ______________________________ ______________________________ - M R W K L 0 1 1 0 0 0 0 1 1 0 1 1 2 0 1 0 0 1 0 1 0 0 11 1 0 1 1367.6955 P0A858 P0A858 1 11 tpiA Triosephosphate isomerase yes yes 3 0.022892 32.034 By matching By matching By MS/MS 1 1 1 12607000 0 5310200 0 0 3089600 4206800 0 0 3257 139 3575 19516;19517;19518 14663 14663 0 0 5435600 0 0 3726900 4660200 0 0 MRLDKFIA ______________________________ ______________________________ - M R I A Q 1 1 0 1 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 8 2 0 0 992.54772 P0AA43 P0AA43 1 8 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 0.0092847 68.915 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29493000 1544300 1835900 0 0 7531800 18581000 0 0 3258 183 3576 19519;19520;19521;19522 14664 14664 1 9322500 10988000 0 0 10723000 26488000 0 0 MRLDKFIAQQLGVSR ______________________________ MRLDKFIAQQLGVSRAIAGREIRGNRVTVD - M R S R A 1 2 0 1 0 2 0 1 0 1 2 1 1 1 0 1 0 0 0 1 0 0 15 2 0 1 1760.972 P0AA43 P0AA43 1 15 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3 0.0034267 41.695 By MS/MS 1 5621800 5621800 0 0 0 0 0 0 0 3259 183 3577 19523 14665 14665 1 5621800 0 0 0 0 0 0 0 MRLDKFIAQQLGVSRAIAGRE ______________________________ IAQQLGVSRAIAGREIRGNRVTVDGEIVRN - M R R E I 3 3 0 1 0 2 1 2 0 2 2 1 1 1 0 1 0 0 0 1 0 0 21 4 0 3 2358.2954 P0AA43 P0AA43 1 21 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4 0.00013897 37.969 By MS/MS By MS/MS 2 2 16813000 0 0 0 0 8605900 8207100 0 0 3260 183 3578;3579 19524;19525;19526;19527 14666;14667;14668;14669;14670 14666 177 5 0 0 0 0 132500000 124390000 0 0 MRLNTLSP ______________________________ ______________________________ - M R S P A 0 1 1 0 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 0 0 0 8 1 0 0 930.49569 P02413 P02413 1 8 rplO 50S ribosomal protein L15 yes yes 2 0.0031586 81.297 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 74323000 14353000 16057000 0 0 31845000 12067000 0 0 3261 37 3580;3581 19528;19529;19530;19531;19532;19533;19534 14671;14672 14672 66 1 86644000 96101000 0 0 45338000 17202000 0 0 MRLNTLSPAE ______________________________ ______________________________ - M R A E G 1 1 1 0 0 0 1 0 0 0 2 0 1 0 1 1 1 0 0 0 0 0 10 1 0 2 1130.5754 P02413 P02413 1 10 rplO 50S ribosomal protein L15 yes yes 2 0.019929 42.599 By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14407000 4036900 2720300 2674900 2817600 0 2157600 0 0 3262 37 3582 19535;19536;19537;19538;19539 14673 14673 1 62026000 41484000 22728000 21362000 0 32701000 0 0 MRLNTLSPAEGSK ______________________________ ______________________________ - M R S K K 1 1 1 0 0 0 1 1 0 0 2 1 1 0 1 2 1 0 0 0 0 0 13 1 1 2 1402.7238 P02413 P02413 1 13 rplO 50S ribosomal protein L15 yes yes 2;3 3.7184E-57 168.02 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 3 318460000 122540000 117570000 0 0 40239000 38113000 0 0 3263 37 3583;3584 19540;19541;19542;19543;19544;19545;19546;19547;19548;19549;19550;19551;19552;19553 14674;14675;14676;14677;14678;14679;14680;14681;14682;14683;14684;14685 14679 66 12 122540000 126440000 0 0 49316000 43356000 0 0 MRPENLAQYIGQQHLLAAGKPLPR SLDFSDNTFQPLAARMRPENLAQYIGQQHL IGQQHLLAAGKPLPRAIEAGHLHSMILWGP R M R P R A 3 2 1 0 0 3 1 2 1 1 4 1 1 0 3 0 0 0 1 0 0 0 24 2 1 6 2700.4646 P0AAZ4 P0AAZ4 20 43 rarA Replication-associated recombination protein A yes yes 4 2.241E-31 103.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 59219000 18699000 11580000 0 0 8942500 19998000 0 0 3264 189 3585 19554;19555;19556;19557 14686;14687;14688;14689 14689 4 18699000 11853000 0 0 10787000 22153000 0 0 MSAPIGGK EAIIIDQVQCTHLMRMSAPIGGKLPMHASG QCTHLMRMSAPIGGKLPMHASGAGKAFLAQ R M S G K L 1 0 0 0 0 0 0 2 0 1 0 1 1 0 1 1 0 0 0 0 0 0 8 0 0 2 759.39491 P16528 P16528 146 153 iclR Acetate operon repressor yes yes 2 0.0032493 69.998 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 222320000 50158000 57487000 0 0 56372000 58303000 0 0 3265 285 3586;3587 19558;19559;19560;19561;19562;19563;19564 14690;14691;14692;14693;14694 14692 4 50158000 58844000 0 0 68001000 64586000 0 0 MSAPIGGKLPMHASGAGK EAIIIDQVQCTHLMRMSAPIGGKLPMHASG PIGGKLPMHASGAGKAFLAQLSEEQVTKLL R M S G K A 3 0 0 0 0 0 0 4 1 1 1 2 2 0 2 2 0 0 0 0 0 0 18 1 0 5 1708.8753 P16528 P16528 146 163 iclR Acetate operon repressor yes yes 4 0.016005 17.577 By MS/MS 1 8015200 8015200 0 0 0 0 0 0 0 3266 285 3588 19565 14695 14695 1 8015200 0 0 0 0 0 0 0 MSGECAPNVSVSVSTSHTTISGGGSR EIATYRTLLEGEESRMSGECAPNVSVSVST SVSTSHTTISGGGSRGGGGGGYGSGGSSYG R M S S R G 1 1 1 0 1 0 1 4 1 1 0 0 1 0 1 7 3 0 0 3 0 0 26 0 1 2 2564.1595 CON__P04264 CON__P04264 493 518 yes yes 3 5.0413E-41 108.64 By MS/MS By MS/MS 2 2 39559000 0 0 0 0 17807000 21752000 0 0 + 3267 9 3589;3590 19566;19567;19568;19569 14696;14697;14698;14699;14700 14698 7 5 0 0 0 0 21481000 24096000 0 0 MSGYTVK ______________________________ ______________________________ - M S V K P 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 0 0 7 0 0 0 784.37893 P76137 P76137 1 7 ydeT Putative uncharacterized protein ydet yes yes 2 0.0061763 40.921 By MS/MS 1 4035400 4035400 0 0 0 0 0 0 0 3268 417 3591 19570 14701 14701 321 1 4035400 0 0 0 0 0 0 0 MSIGEAK ETGLTIEQVKDINRRMSIGEAKARRAKKEM QVKDINRRMSIGEAKARRAKKEMVEANLRL R M S A K A 1 0 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 7 0 1 1 734.36328 P00579 P00579 365 371 rpoD RNA polymerase sigma factor RpoD yes yes 2 2.2267E-05 103.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 256080000 73307000 96557000 0 0 47653000 38567000 0 0 3269 27 3592 19571;19572;19573;19574 14702;14703;14704;14705;14706 14703 4 73307000 98836000 0 0 57484000 42724000 0 0 MSPILGYWK ______________________________ ______________________________ - M S W K I 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 1 1 0 0 0 9 0 0 1 1093.563 GST-Nek6 GST-Nek6 1 9 yes yes 2 0.00080593 86.953 By MS/MS By MS/MS By matching 2 2 1 335790000 0 0 0 0 134880000 200490000 407610 0 3270 23 3593;3594 19575;19576;19577;19578;19579 14707;14708;14709;14710 14707 36 4 0 0 0 0 162710000 222100000 3137100 0 MSQLTGQNSGDVNVE LQEELMALKKNHKEEMSQLTGQNSGDVNVE MSQLTGQNSGDVNVEINVAPGKDLTKTLND E M S V E I 0 0 2 1 0 2 1 2 0 0 1 0 1 0 0 2 1 0 0 2 0 0 15 0 0 0 1577.6991 CON__P35527 CON__P35527 296 310 yes yes 2 8.5307E-13 77.593 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 88889000 5577400 4393300 4494600 0 4838700 5183300 31479000 32923000 + 3271 15 3595 19580;19581;19582;19583;19584;19585;19586;19587 14711;14712;14713;14714;14715;14716;14717 14716 23 7 85694000 66998000 38190000 0 74496000 78561000 242270000 188940000 MSSGKDTPSGHWE DGNAEVIGAYAWAHEMSSGKDTPSGHWEIA HEMSSGKDTPSGHWEIAGVPVLFEWGYFSD E M S W E I 0 0 0 1 0 0 1 2 1 0 0 1 1 0 1 3 1 1 0 0 0 0 13 1 0 1 1417.5932 P0A6K6 P0A6K6 92 104 deoB Phosphopentomutase yes yes 3 0.012757 36.284 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 15098000 3958600 3376300 0 0 981880 1604800 0 5176800 3272 75 3596 19588;19589;19590;19591;19592 14718 14718 1 60823000 51490000 0 0 15117000 24323000 0 29709000 MTDLHTDVER ______________________________ ______________________________ - M T E R Y 0 1 0 2 0 0 1 0 1 0 1 0 1 0 0 0 2 0 0 1 0 0 10 0 1 0 1215.5554 P0A8P6 P0A8P6 1 10 xerC Tyrosine recombinase XerC yes yes 2;3 8.0585E-21 162.88 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 205240000 61277000 59847000 0 0 49350000 34765000 0 0 3273 150 3597;3598 19593;19594;19595;19596;19597;19598;19599;19600;19601;19602;19603;19604;19605;19606;19607;19608 14719;14720;14721;14722;14723;14724;14725;14726;14727;14728;14729;14730;14731;14732;14733 14727 146 15 61277000 61260000 0 0 59531000 38512000 0 0 MTDNNTALK ______________________________ ______________________________ - M T L K K 1 0 2 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 9 0 0 1 1006.4753 P0A9A9 P0A9A9 1 9 fur Ferric uptake regulation protein yes yes 2 3.0019E-09 119.27 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 86478000 31939000 26918000 0 0 15605000 12015000 0 0 3274 162 3599 19609;19610;19611;19612 14734;14735;14736 14734 3 31939000 27554000 0 0 18824000 13310000 0 0 MTDNNTALKK ______________________________ ______________________________ - M T K K A 1 0 2 1 0 0 0 0 0 0 1 2 1 0 0 0 2 0 0 0 0 0 10 1 0 1 1134.5703 P0A9A9 P0A9A9 1 10 fur Ferric uptake regulation protein yes yes 2;3 0.00011115 90.657 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 133360000 50410000 56015000 0 0 14633000 12298000 0 0 3275 162 3600 19613;19614;19615;19616;19617;19618;19619;19620 14737;14738;14739;14740 14737 3 50410000 57337000 0 0 17652000 13624000 0 0 MTGDNPDAPR QDPTMQRRTMATFRRMTGDNPDAPRWLSYP ATFRRMTGDNPDAPRWLSYPGFVPQLGNNA R M T P R W 1 1 1 2 0 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 0 0 10 0 0 3 1072.4608 P34209 P34209 166 175 ydcF Protein YdcF yes yes 2 0.0003792 87.308 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 54274000 21730000 17129000 0 0 8437500 6977600 0 0 3276 347 3601;3602 19621;19622;19623;19624;19625 14741;14742;14743;14744 14743 278 4 21730000 17533000 0 0 10178000 7729600 0 0 MTGVDLETMEE RFREVERIVAARGLEMTGVDLETMEEVWQQ RGLEMTGVDLETMEEVWQQVKRQEIDL___ E M T E E V 0 0 0 1 0 0 3 1 0 0 1 0 2 0 0 0 2 0 0 1 0 0 11 0 2 0 1253.5156 P0AEY3 P0AEY3 241 251 mazG Nucleoside triphosphate pyrophosphohydrolase yes yes 2 0.0016975 51.854 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64282000 16480000 22283000 0 0 12309000 13210000 0 0 3277 240 3603 19626;19627;19628;19629 14745;14746;14747;14748 14746 212 2 253210000 339820000 0 0 189510000 200210000 0 0 MTHHLFHSVR VQCVERNGKKLYVKRMTHHLFHSVRYPFGR LYVKRMTHHLFHSVRYPFGRPTIVREVAVI R M T V R Y 0 1 0 0 0 0 0 0 3 0 1 0 1 1 0 1 1 0 0 1 0 0 10 0 0 0 1263.6295 P27294 P27294 49 58 inaA Protein InaA yes yes 3 0.0029667 33.89 By MS/MS By MS/MS By MS/MS 1 1 1 5335000 0 0 0 0 5335000 0 0 0 3278 321 3604 19630;19631;19632 14749;14750;14751 14749 3 0 0 0 0 6435600 0 0 0 MTIQTVGDEK ESLTVAPTDDPTLSRMTIQTVGDEKVLEQI PTLSRMTIQTVGDEKVLEQIEKQLHKLVDV R M T E K V 0 0 0 1 0 1 1 1 0 1 0 1 1 0 0 0 2 0 0 1 0 0 10 0 1 0 1120.5434 P00894 P00894 46 55 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 2.6479E-28 148.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 59992000 17183000 20762000 0 0 10107000 11940000 0 0 3279 30 3605 19633;19634;19635;19636 14752;14753;14754;14755;14756 14752 5 17183000 21252000 0 0 12192000 13227000 0 0 MTLDDFR TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN LLDIDNTRMTLDDFRIKFEMEQNLRQGVDA R M T F R I 0 1 0 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 0 0 896.4062 CON__P35527 CON__P35527 234 240 yes yes 2 4.8403E-17 138.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 900210000 159210000 120260000 0 0 278460000 342270000 0 0 + 3280 15 3606;3607 19637;19638;19639;19640;19641;19642;19643;19644;19645;19646 14757;14758;14759;14760;14761;14762;14763;14764 14763 24 8 159210000 125870000 0 0 336880000 379160000 0 0 MTLQANHE AIIFASRRRDDLVPEMTLQANHELLTLTLP RDDLVPEMTLQANHELLTLTLPQGWLTQHP E M T H E L 1 0 1 0 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 8 0 0 1 942.42292 P25552 P25552 449 456 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 1.2353E-73 177.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 104620000 12135000 11478000 13921000 21703000 6772700 7462300 10138000 21007000 3281 316 3608 19647;19648;19649;19650;19651;19652;19653;19654 14765;14766;14767;14768;14769;14770;14771;14772 14766 8 186450000 175040000 118290000 164540000 104270000 113100000 78027000 120560000 MTLTEIVAK VPAVFVNGKEFGQGRMTLTEIVAKIDTGAE EFGQGRMTLTEIVAKIDTGAEKRAAEELNK R M T A K I 1 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 1 0 0 9 0 1 1 1004.5576 P35340 P35340 186 194 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.442E-13 126.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2107600000 578200000 512160000 0 0 536060000 481140000 0 0 3282 348 3609;3610 19655;19656;19657;19658;19659;19660;19661;19662 14773;14774;14775;14776;14777;14778;14779;14780 14773 280 8 578200000 524240000 0 0 646650000 533000000 0 0 MTMNITSKQME ______________________________ ______________________________ - M T M E I 0 0 1 0 0 1 1 0 0 1 0 1 3 0 0 1 2 0 0 0 0 0 11 1 0 0 1312.5825 P0AD49 P0AD49 1 11 raiA Ribosome-associated inhibitor A yes yes 2 0.0010006 50.04 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 1 0 0 0 0 0 0 0 0 0 3283 220 3611 19663;19664;19665;19666;19667;19668;19669 14781;14782;14783;14784;14785 14781 199;200;201 20;51;52 0 0 0 0 0 0 0 0 0 MTPILNHYFAR ______________________________ ______________________________ - M T A R I 1 1 1 0 0 0 0 0 1 1 1 0 1 1 1 0 1 0 1 0 0 0 11 0 0 2 1361.6914 P77567 P77567 1 11 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2;3 1.5753E-12 124.98 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 2 250110000 55576000 49536000 0 0 74380000 70616000 0 0 3284 436 3612;3613 19670;19671;19672;19673;19674;19675;19676;19677;19678;19679;19680;19681 14786;14787;14788;14789;14790;14791;14792;14793;14794 14789 337 9 55576000 50705000 0 0 89813000 78227000 0 0 MTPREIVSE ______________________________ ______________________________ E M T S E L 0 1 0 0 0 0 2 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 9 1 1 1 1060.5223 P0A6H5 P0A6H5 4 12 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.00031135 79.469 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 61979000 13405000 7424500 7763200 4073600 2553800 2476300 9359600 14922000 3285 71 3614;3615 19682;19683;19684;19685;19686;19687;19688;19689;19690 14795;14796;14797;14798 14796 4 162370000 113230000 65963000 30885000 39319000 37532000 72034000 85638000 MTSENPLLALR ______________________________ ______________________________ - M T L R E 1 1 1 0 0 0 1 0 0 0 3 0 1 0 1 1 1 0 0 0 0 0 11 0 1 2 1243.6595 P0A9J8 P0A9J8 1 11 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 3.2848E-52 169.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 457920000 129570000 121520000 0 0 99828000 107010000 0 0 3286 166 3616;3617 19691;19692;19693;19694;19695;19696;19697;19698 14799;14800;14801;14802;14803;14804;14805 14799 157 7 129570000 124390000 0 0 120420000 118540000 0 0 MTSENPLLALRE ______________________________ ______________________________ - M T R E K 1 1 1 0 0 0 2 0 0 0 3 0 1 0 1 1 1 0 0 0 0 0 12 1 1 2 1372.7021 P0A9J8 P0A9J8 1 12 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 9.0754E-12 96.229 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 1 1 83921000 6063400 5360900 13967000 9115800 3582300 4687100 18154000 22990000 3287 166 3618;3619 19699;19700;19701;19702;19703;19704;19705;19706;19707;19708 14806;14807;14808;14809;14810;14811;14812;14813;14814;14815 14815 157 10 93162000 81755000 118680000 69112000 55153000 71040000 139720000 131940000 MTSQEAACFPDIISGPQQTQK GVEGAAFQSRLPHDRMTSQEAACFPDIISG ACFPDIISGPQQTQKVFLFIRNRTLQLWLD R M T Q K V 2 0 0 1 1 4 1 1 0 2 0 1 1 1 2 2 2 0 0 0 0 0 21 0 1 4 2336.0777 LSD1-FL-His LSD1-FL-His 190 210 yes yes 2;3 0 350.86 By MS/MS By MS/MS By MS/MS By MS/MS 4 5 4 4 11168000000 3366400000 3046400000 0 0 1676100000 3079200000 0 0 3288 24 3620;3621;3622 19709;19710;19711;19712;19713;19714;19715;19716;19717;19718;19719;19720;19721;19722;19723;19724;19725 14816;14817;14818;14819;14820;14821;14822;14823;14824;14825;14826;14827;14828;14829;14830;14831;14832;14833;14834 14817 44 10 17 3366400000 3118300000 0 0 2021900000 3411100000 0 0 MTYQQAGR ______________________________ ______________________________ - M T G R I 1 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 8 0 0 1 953.4389 P76208 P76208 1 8 yniB Uncharacterized protein YniB yes yes 2 0.0020047 52.636 By MS/MS By MS/MS By MS/MS 1 1 1 49262000 16253000 18205000 0 0 14804000 0 0 0 3289 418 3623 19726;19727;19728 14835;14836;14837 14836 322 3 16253000 18634000 0 0 17858000 0 0 0 MVLGKPQTDPTLE ______________________________ ______________________________ - M V L E W 0 0 0 1 0 1 1 1 0 0 2 1 1 0 2 0 2 0 0 1 0 0 13 1 0 2 1427.733 P0ACJ8 P0ACJ8 1 13 crp cAMP-activated global transcriptional regulator CRP yes yes 2 1.222E-97 187.42 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 2 2 2 3 3663000000 274570000 257610000 755690000 819690000 221650000 206140000 477700000 649990000 3290 213 3624;3625;3626 19729;19730;19731;19732;19733;19734;19735;19736;19737;19738;19739;19740;19741;19742;19743;19744;19745;19746;19747 14838;14839;14840;14841;14842;14843;14844;14845;14846;14847;14848;14849;14850;14851;14852;14853;14854;14855;14856;14857 14849 192 19 4218700000 3928500000 6421000000 6214500000 3412400000 3124300000 3676500000 3730200000 MVLGKPQTDPTLEWFLSHCHIHK ______________________________ DPTLEWFLSHCHIHKYPSKSTLIHQGEKAE - M V H K Y 0 0 0 1 1 1 1 1 3 1 3 2 1 1 2 1 2 1 0 1 0 0 23 1 1 2 2773.3832 P0ACJ8 P0ACJ8 1 23 crp cAMP-activated global transcriptional regulator CRP yes yes 4;5 4.6142E-86 163.85 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 623700000 149230000 172670000 0 0 167280000 134520000 0 0 3291 213 3627;3628 19748;19749;19750;19751;19752;19753;19754;19755;19756;19757;19758;19759 14858;14859;14860;14861;14862;14863;14864;14865;14866;14867;14868;14869;14870;14871 14865 192 14 149230000 176750000 0 0 201790000 149020000 0 0 MVLMIVSGR ______________________________ ______________________________ - M V G R S 0 1 0 0 0 0 0 1 0 1 1 0 2 0 0 1 0 0 0 2 0 0 9 0 0 0 1004.5511 P0A894 P0A894 1 9 rapZ RNase adapter protein RapZ yes yes 2 0.0019212 82.452 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57421000 13860000 13687000 0 0 16042000 13832000 0 0 3292 141 3629 19760;19761;19762;19763 14872;14873;14874;14875 14872 4 13860000 14010000 0 0 19352000 15323000 0 0 MVNLKEK KIVKTQEELKELLNKMVNLKEKIKELHQQY ELKELLNKMVNLKEKIKELHQQYKEASEVK K M V E K I 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 7 1 1 0 860.47897 LSD1-FL-His LSD1-FL-His 450 456 yes yes 2 2.6501E-11 133.81 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 133240000 50219000 64021000 0 0 10604000 8393100 0 0 3293 24 3630;3631 19764;19765;19766;19767;19768;19769;19770;19771 14876;14877;14878;14879 14878 47 4 50219000 65532000 0 0 12791000 9297600 0 0 MVQAPIFHVNADDPEAVAFVTR PLDARSTPYCTDIGKMVQAPIFHVNADDPE HVNADDPEAVAFVTRLALDFRNTFKRDVFI K M V T R L 4 1 1 2 0 1 1 0 1 1 0 0 1 2 2 0 1 0 0 4 0 0 22 0 1 6 2426.2053 P0AFG3 P0AFG3 414 435 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 4.7658E-62 145.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 350280000 95148000 87194000 0 0 71849000 96086000 0 0 3294 246 3632;3633 19772;19773;19774;19775;19776;19777;19778;19779 14880;14881;14882;14883;14884;14885;14886;14887;14888 14887 222 9 95148000 89252000 0 0 86672000 106440000 0 0 MVQLFFPDPWHK AVEVLHKMIPDNSLRMVQLFFPDPWHKARH SLRMVQLFFPDPWHKARHNKRRIVQVPFAE R M V H K A 0 0 0 1 0 1 0 0 1 0 1 1 1 2 2 0 0 1 0 1 0 0 12 0 0 2 1543.7646 P0A8I5 P0A8I5 137 148 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2;3 6.1763E-70 178.22 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 6 976820000 293850000 325170000 0 0 126890000 230920000 0 0 3295 144 3634;3635 19780;19781;19782;19783;19784;19785;19786;19787;19788;19789;19790;19791;19792;19793;19794;19795;19796 14889;14890;14891;14892;14893;14894;14895;14896;14897;14898;14899;14900;14901;14902 14901 141 14 293850000 332840000 0 0 153060000 256110000 0 0 MVVTGLGGNPMA VATFRKGNYVADLGAMVVTGLGGNPMAVVS LGAMVVTGLGGNPMAVVSKQVNMELAKIKQ A M V M A V 1 0 1 0 0 0 0 3 0 0 1 0 2 0 1 0 1 0 0 2 0 0 12 0 0 1 1145.5573 LSD1-FL-His LSD1-FL-His 334 345 yes yes 2 0.0088786 31.934 By MS/MS 1 0 0 0 0 0 0 0 0 0 3296 24 3636 19797 14903 14903 45;46 1 0 0 0 0 0 0 0 0 MVVTLIHPIAMDDGLR LPEGVEMVMPGDNIKMVVTLIHPIAMDDGL VVTLIHPIAMDDGLRFAIREGGRTVGAGVV K M V L R F 1 1 0 2 0 0 0 1 1 2 2 0 2 0 1 0 1 0 0 2 0 0 16 0 0 2 1779.9375 P0CE48;P0CE47 P0CE48 359 374 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2;3 3.6771E-68 197.31 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 250640000 55955000 57549000 0 0 51876000 85258000 0 0 3297 269 3637;3638 19798;19799;19800;19801;19802;19803;19804;19805;19806;19807;19808;19809 14904;14905;14906;14907;14908;14909;14910;14911;14912;14913;14914;14915;14916;14917 14917 231 14 55955000 58907000 0 0 62578000 94447000 0 0 MVYAPTQEHGK RPAIVRRTMGSKKIRMVYAPTQEHGKQVKI KKIRMVYAPTQEHGKQVKIEDVPQEQRDIF R M V G K Q 1 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 1 0 1 1 0 0 11 0 1 2 1259.5969 P23538 P23538 267 277 ppsA Phosphoenolpyruvate synthase yes yes 3 0.012082 31.431 By MS/MS By MS/MS By matching 1 1 1 10776000 2779900 6179900 0 0 0 1816200 0 0 3298 303 3639 19810;19811;19812 14918;14919 14918 2 2779900 6325800 0 0 0 2012000 0 0 MWEFFER QGYPIGCKVTLRGERMWEFFERLITIAVPR KVTLRGERMWEFFERLITIAVPRIRDFRGL R M W E R L 0 1 0 0 0 0 2 0 0 0 0 0 1 2 0 0 0 1 0 0 0 0 7 0 2 0 1043.4535 P62399 P62399 96 102 rplE 50S ribosomal protein L5 yes yes 2 0.002524 79.597 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37781000 10145000 11760000 0 0 6405400 9469900 0 0 3299 388 3640 19813;19814;19815;19816 14920;14921;14922;14923 14923 4 10145000 12037000 0 0 7726900 10491000 0 0 MWLSKTERT EHVYPMQIRGGGMDEMWLSKTERT______ GGGMDEMWLSKTERT_______________ E M W R T - 0 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 9 2 1 0 1150.5805 P00893 P00893 566 574 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 3 0.0045656 60.518 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 67424000 3509300 3534200 18093000 18464000 2425400 2471100 8316400 10611000 3300 29 3641 19817;19818;19819;19820;19821;19822;19823;19824 14924;14925;14926;14927;14928;14929 14926 6 53919000 53897000 153730000 139980000 37342000 37453000 64005000 60896000 MYAVFQSGGK ______________________________ ______________________________ - M Y G K Q 1 0 0 0 0 1 0 2 0 0 0 1 1 1 0 1 0 0 1 1 0 0 10 0 0 1 1086.5168 P0AG48 P0AG48 1 10 rplU 50S ribosomal protein L21 yes yes 2 0.00025987 109.11 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 143340000 36267000 37015000 0 0 33091000 36963000 0 0 3301 258 3642 19825;19826;19827;19828 14930;14931;14932 14931 3 36267000 37889000 0 0 39918000 40947000 0 0 MYAVFQSGGKQHRVSE ______________________________ YAVFQSGGKQHRVSEGQTVRLEKLDIATGE - M Y S E G 1 1 0 0 0 2 1 2 1 0 0 1 1 1 0 2 0 0 1 2 0 0 16 2 0 1 1822.8785 P0AG48 P0AG48 1 16 rplU 50S ribosomal protein L21 yes yes 2;3;4 2.7442E-37 133.14 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 3 4 4 2 3 898150000 58037000 68308000 161480000 163940000 78488000 72549000 85106000 210250000 3302 258 3643;3644 19829;19830;19831;19832;19833;19834;19835;19836;19837;19838;19839;19840;19841;19842;19843;19844;19845;19846;19847;19848;19849;19850;19851;19852;19853;19854;19855 14933;14934;14935;14936;14937;14938;14939;14940;14941;14942;14943;14944;14945;14946;14947;14948;14949;14950;14951;14952;14953;14954;14955;14956;14957 14951 228 23 891720000 1041700000 1372000000 1242900000 1208400000 1099600000 654990000 1206600000 NAADEDRDALR ITKGLGAGANPEVGRNAADEDRDALRAALE EVGRNAADEDRDALRAALEGADMVFIAAGM R N A L R A 3 2 1 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 11 1 1 3 1244.5745 P0A9A6 P0A9A6 79 89 ftsZ Cell division protein FtsZ yes yes 2;3 6.9611E-05 68.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 46208000 16182000 14890000 0 0 8143300 6992900 0 0 3303 161 3645 19856;19857;19858;19859;19860;19861;19862;19863 14958;14959;14960;14961 14960 4 16182000 15241000 0 0 9823300 7746600 0 0 NAALLAEVPHSVPAVTVNR GCVQQTLEQGFNIARNAALLAEVPHSVPAV LAEVPHSVPAVTVNRLCGSSMQALHDAARM R N A N R L 4 1 2 0 0 0 1 0 1 0 2 0 0 0 2 1 1 0 0 4 0 0 19 0 1 6 1957.0745 P21151 P21151 71 89 fadA 3-ketoacyl-CoA thiolase yes yes 3 0.00015369 49.224 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25660000 6004700 4151100 0 0 7238100 8266200 0 0 3304 292 3646 19864;19865;19866;19867 14962;14963 14963 2 6004700 4249000 0 0 8731300 9157100 0 0 NADELLSKVEHIQILA GRISHGQVDLSELGPNADELLSKVEHIQIL ADELLSKVEHIQILACGTSYNSGMVSRYWF P N A L A C 2 0 1 1 0 1 2 0 1 2 3 1 0 0 0 1 0 0 0 1 0 0 16 1 2 1 1791.9731 P17169 P17169 285 300 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 0.0056136 37.555 By MS/MS By MS/MS By MS/MS 1 2 2 24909000 0 524890 0 0 9417900 14967000 0 0 3305 288 3647 19868;19869;19870;19871;19872 14964;14965 14964 2 0 3141500 0 0 13408000 21335000 0 0 NAEGDRTTPSIIAYTQDGE SCVAIMDGTTPRVLENAEGDRTTPSIIAYT DRTTPSIIAYTQDGETLVGQPAKRQAVTNP E N A G E T 2 1 1 2 0 1 2 2 0 2 0 0 0 0 1 1 3 0 1 0 0 0 19 1 1 3 2036.9287 P0A6Y8 P0A6Y8 29 47 dnaK Chaperone protein DnaK yes yes 2;3 1.1137E-40 108.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 1 645560000 3357200 3475600 143310000 158040000 11893000 11019000 141040000 173420000 3306 86 3648 19873;19874;19875;19876;19877;19878;19879;19880;19881;19882 14966;14967;14968;14969;14970;14971;14972;14973 14971 8 51582000 53004000 1217700000 1198200000 183110000 167000000 1085500000 995230000 NAHLVLSAASFAE PLVMVVDHQRTAIMENAHLVLSAASFAESD MENAHLVLSAASFAESDGTVINNEGRAQRF E N A A E S 4 0 1 0 0 0 1 0 1 0 2 0 0 1 0 2 0 0 0 1 0 0 13 0 0 4 1328.6725 P33602 P33602 603 615 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.6483E-10 93.111 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12119000 1581900 2153400 0 1319400 2032700 2177300 0 2854800 3307 345 3649 19883;19884;19885;19886;19887;19888 14974;14975;14976;14977;14978;14979 14976 5 24305000 32839000 0 10003000 31295000 33001000 0 16383000 NAIKNTLTGRISHGQVDLSELGP GIYRHYMQKEIYEQPNAIKNTLTGRISHGQ GRISHGQVDLSELGPNADELLSKVEHIQIL P N A G P N 1 1 2 1 0 1 1 3 1 2 3 1 0 0 1 2 2 0 0 1 0 0 23 2 1 1 2419.2819 P17169 P17169 262 284 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4 0.02222 13.188 By matching By MS/MS 1 1 4345500 0 0 0 0 2448400 1897100 0 0 3308 288 3650 19889;19890 14980 14980 1 0 0 0 0 3485800 2704300 0 0 NAILIHDPQLE TGNNLNPRAWRLDLENAILIHDPQLELAPQ LDLENAILIHDPQLELAPQREKELELIREH E N A L E L 1 0 1 1 0 1 1 0 1 2 2 0 0 0 1 0 0 0 0 0 0 0 11 0 0 2 1261.6667 P23830 P23830 386 396 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.00051877 70.056 By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9446100 0 2369700 1732100 1661400 0 0 1279200 2403700 3309 304 3651 19891;19892;19893;19894;19895 14981 14981 1 0 36138000 14717000 12596000 0 0 9845100 13795000 NALAALRE QTLLSSFGTPFERVENALAALREGRGVMVL TPFERVENALAALREGRGVMVLDDEDRENE E N A R E G 3 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 0 3 856.47667 P0A7J0 P0A7J0 18 25 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 3.8943E-07 98.458 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1099500000 69664000 74580000 198580000 200530000 53778000 56891000 169290000 276160000 3310 105 3652 19896;19897;19898;19899;19900;19901;19902;19903 14982;14983;14984;14985 14983 3 1070400000 1137400000 1687300000 1520400000 827970000 862270000 1302900000 1584800000 NALEIPADTFRE IDMRNHYEYEVGHFENALEIPADTFREQLP HFENALEIPADTFREQLPKAVEMMQAHKDK E N A R E Q 2 1 1 1 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 12 1 1 3 1374.6779 P24188 P24188 168 179 yceA UPF0176 protein YceA yes yes 2 0.0010507 59.426 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24317000 3415100 3176500 4099500 4086500 0 0 3669500 5870300 3311 310 3653 19904;19905;19906;19907;19908;19909 14986;14987;14988 14987 3 52472000 48443000 34833000 30982000 0 0 28241000 33689000 NALKAANIDI LMGDAVEPRRAFIEENALKAANIDI_____ AFIEENALKAANIDI_______________ E N A D I - 3 0 2 1 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 10 1 0 3 1041.5819 P0AES6 P0AES6 795 804 gyrB DNA gyrase subunit B yes yes 2 7.2599E-05 96.492 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 252680000 21065000 18543000 32414000 35172000 24956000 12836000 42053000 65640000 3312 239 3654 19910;19911;19912;19913;19914;19915;19916;19917 14989;14990;14991;14992;14993 14989 5 323650000 282790000 275420000 266660000 384220000 194550000 323650000 376700000 NATLEVAEALER EAEDFDAAIIFVRTKNATLEVAEALERNGY RTKNATLEVAEALERNGYNSAALNGDMNQA K N A E R N 3 1 1 0 0 0 3 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 12 0 3 3 1314.6779 P0A9P6 P0A9P6 256 267 deaD ATP-dependent RNA helicase DeaD yes yes 2 0.018852 49.189 By MS/MS 1 8925500 0 0 0 0 0 8925500 0 0 3313 173 3655 19918 14994 14994 1 0 0 0 0 0 9887500 0 0 NATPITNK DANNIYLAANYGETRNATPITNKFTNTSGF ANYGETRNATPITNKFTNTSGFANKTQDVL R N A N K F 1 0 2 0 0 0 0 0 0 1 0 1 0 0 1 0 2 0 0 0 0 0 8 0 0 2 857.46068 P02931 P02931 258 265 ompF Outer membrane protein F yes yes 2 0.015724 60.682 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16957000 4956900 4898500 0 0 4353600 2747900 0 0 3314 38 3656 19919;19920;19921;19922 14995 14995 0 4956900 5014100 0 0 5251800 3044100 0 0 NDAADLGAAGGMGGMGGMGGMM GLMITTECMVTDLPKNDAADLGAAGGMGGM AAGGMGGMGGMGGMM_______________ K N D M M - 4 0 1 2 0 0 0 9 0 0 1 0 5 0 0 0 0 0 0 0 0 0 22 0 0 4 1927.7355 P0A6F5 P0A6F5 527 548 groL 60 kDa chaperonin yes yes 2 4.5163E-85 164.11 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 237870000 51111000 53090000 0 0 61022000 72647000 0 0 3315 68 3657;3658 19923;19924;19925;19926;19927;19928;19929;19930 14996;14997;14998;14999;15000;15001;15002 14999 84;85 7 51111000 54343000 0 0 73611000 80477000 0 0 NDAQLSIITAKDEE GRVNGELVDACDLIENDAQLSIITAKDEEG ENDAQLSIITAKDEEGLEIIRHSCAHLLGH E N D E E G 2 0 1 2 0 1 2 0 0 2 1 1 0 0 0 1 1 0 0 0 0 0 14 1 1 2 1545.7522 P0A8M3 P0A8M3 53 66 thrS Threonine--tRNA ligase yes yes 2 0.015687 42.031 By matching By MS/MS 1 1 5332800 0 0 0 2186500 0 0 3146300 0 3316 147 3659 19931;19932 15003 15003 1 0 0 0 16577000 0 0 24215000 0 NDAYGQYDENLVQRVP EGHEVGDKFDVAVGANDAYGQYDENLVQRV DAYGQYDENLVQRVPKDVFMGVDELQVGMR A N D V P K 1 1 2 2 0 2 1 1 0 0 1 0 0 0 1 0 0 0 2 2 0 0 16 1 1 1 1879.8701 P0A9K9 P0A9K9 65 80 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 2.1029E-22 127.37 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1056500000 79338000 83823000 0 0 624950000 268390000 0 0 3317 169 3660 19933;19934;19935;19936;19937;19938;19939;19940 15004;15005;15006;15007;15008;15009;15010;15011;15012;15013;15014 15004 11 478930000 501680000 0 0 889740000 382600000 0 0 NDDAAFER EIKDALSYLRLIANRNDDAAFERVVNTPTR LRLIANRNDDAAFERVVNTPTRGIGDRTLD R N D E R V 2 1 1 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 8 0 1 2 936.39372 P03018 P03018 402 409 uvrD DNA helicase II yes yes 2 0.0043709 51.346 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6529800 2960100 0 0 0 1701300 1868400 0 0 3318 41 3661 19941;19942;19943;19944 15015;15016;15017;15018 15016 4 2960100 0 0 0 2052300 2069800 0 0 NDEALNSQR FREKNRDRCLVILSRNDEALNSQRTSEELH LVILSRNDEALNSQRTSEELHHYYEIVWDE R N D Q R T 1 1 2 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1 1 1045.4789 P0A8E1 P0A8E1 134 142 ycfP UPF0227 protein YcfP yes yes 2 5.4424E-91 190.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 366730000 134470000 151820000 0 0 51879000 28552000 0 0 3319 143 3662 19945;19946;19947;19948 15019;15020;15021;15022 15021 4 134470000 155410000 0 0 62582000 31629000 0 0 NDLIAIGSGGPYAQAAARALLE ASLIITGNGDVVQPENDLIAIGSGGPYAQA SGGPYAQAAARALLENTELSAREIAEKALD E N D L E N 6 1 1 1 0 1 1 3 0 2 3 0 0 0 1 1 0 0 1 0 0 0 22 1 0 7 2170.1382 P0A7B8 P0A7B8 118 139 hslV ATP-dependent protease subunit HslV yes yes 2 7.0121E-48 122.1 By MS/MS By matching 1 1 58210000 0 0 0 0 20921000 37289000 0 0 3320 100 3663 19949;19950 15023 15023 1 0 0 0 0 322090000 565170000 0 0 NDPLAMQR YLVEEFKKDQGIDLRNDPLAMQRLKEAAEK DQGIDLRNDPLAMQRLKEAAEKAKIELSSA R N D Q R L 1 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 8 0 0 2 943.45455 P0A6Y8 P0A6Y8 254 261 dnaK Chaperone protein DnaK yes yes 2 7.5121E-26 152.31 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1007200000 271590000 290990000 0 0 224030000 220620000 0 0 3321 86 3664;3665 19951;19952;19953;19954;19955;19956;19957;19958 15024;15025;15026;15027;15028;15029;15030;15031 15030 91 8 271590000 297850000 0 0 270250000 244400000 0 0 NDPTNSMNPGIGKTSKRKNWQEVE HLYKAPETLQKFYRENDPTNSMNPGIGKTS GIGKTSKRKNWQEVE_______________ E N D V E - 0 1 4 1 0 1 2 2 0 1 0 3 1 0 2 2 2 1 0 1 0 0 24 4 1 2 2729.3191 P06149 P06149 548 571 dld D-lactate dehydrogenase yes yes 4 0.023241 12.677 By MS/MS 1 5022100 0 0 0 5022100 0 0 0 0 3322 50 3666 19959 15032 15032 1 0 0 0 38075000 0 0 0 0 NDVISPEFDENGRPLR ______________________________ DVISPEFDENGRPLRRIRSFVRRQGRLTKG K N D L R R 0 2 2 2 0 0 2 1 0 1 1 0 0 1 2 1 0 0 0 1 0 0 16 1 2 2 1856.9017 P0A8I5 P0A8I5 3 18 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3 1.1589E-19 89.624 By matching By MS/MS 1 1 25750000 0 0 0 0 10411000 15339000 0 0 3323 144 3667 19960;19961 15033 15033 1 0 0 0 0 12559000 16992000 0 0 NDVISPEFDENGRPLRR ______________________________ VISPEFDENGRPLRRIRSFVRRQGRLTKGQ K N D R R I 0 3 2 2 0 0 2 1 0 1 1 0 0 1 2 1 0 0 0 1 0 0 17 2 2 2 2013.0028 P0A8I5 P0A8I5 3 19 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3;4 5.7462E-20 112.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 2 1 210440000 36442000 39355000 0 10920000 60511000 60330000 2884700 0 3324 144 3668 19962;19963;19964;19965;19966;19967;19968;19969 15034;15035;15036;15037;15038;15039 15038 6 36442000 40284000 0 82788000 72995000 66832000 22201000 0 NDVVLVAGKGHE GRAEAVTCAVMQAKENDVVLVAGKGHEDYQ AKENDVVLVAGKGHEDYQIVGNQRLDYSDR E N D H E D 1 0 1 1 0 0 1 2 1 0 1 1 0 0 0 0 0 0 0 3 0 0 12 1 0 1 1236.6463 P22188 P22188 458 469 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase yes yes 2 7.2807E-06 73.499 By MS/MS By MS/MS By matching 1 1 1 12912000 0 2980900 4538500 0 0 0 5392100 0 3325 299 3669 19970;19971;19972 15040;15041 15041 2 0 45460000 38563000 0 0 0 41499000 0 NEASIEE GNRCDGEIINIGNPENEASIEELGEMLLAS IINIGNPENEASIEELGEMLLASFEKHPLR E N E E E L 1 0 1 0 0 0 3 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 7 0 2 1 790.33448 P77398 P77398 570 576 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 1 0.0087489 46.426 By MS/MS By MS/MS 1 1 11746000 0 0 0 6021300 0 0 5724600 0 3326 432 3670 19973;19974 15042;15043 15042 0 0 0 0 45651000 0 0 44058000 0 NEDSPSAIAVGQR PLSRRIIAFEAIVQKNEDSPSAIAVGQRKD QKNEDSPSAIAVGQRKDGEIYTADLKSKAL K N E Q R K 2 1 1 1 0 1 1 1 0 1 0 0 0 0 1 2 0 0 0 1 0 0 13 0 1 3 1342.6477 P75990 P75990 197 209 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 2.7404E-85 188.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35847000 8076600 12741000 0 0 5389200 9640300 0 0 3327 414 3671 19975;19976;19977;19978 15044;15045;15046;15047 15046 4 8076600 13041000 0 0 6501000 10679000 0 0 NEIIPTGGHDADGVLK SHARAWAATQSAAFKNEIIPTGGHDADGVL EIIPTGGHDADGVLKQFNYDEVIRPETTVE K N E L K Q 1 0 1 2 0 0 1 3 1 2 1 1 0 0 1 0 1 0 0 1 0 0 16 0 1 2 1634.8264 P21151 P21151 187 202 fadA 3-ketoacyl-CoA thiolase yes yes 3 0.00030411 56.514 By MS/MS By MS/MS By MS/MS 1 1 1 27949000 10773000 9725600 0 0 0 7450000 0 0 3328 292 3672 19979;19980;19981 15048;15049;15050 15048 3 10773000 9955100 0 0 0 8252900 0 0 NEKLNSLEDVRK AQPTAPGSLKAPDTRNEKLNSLEDVRKGSE DTRNEKLNSLEDVRKGSENYALTTNQGVRI R N E R K G 0 1 2 1 0 0 2 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 12 2 2 0 1443.7682 P21179 P21179 62 73 katE Catalase HPII yes yes 3 0.022152 29.805 By MS/MS 1 3825700 0 3825700 0 0 0 0 0 0 3329 293 3673 19982 15051 15051 1 0 3916000 0 0 0 0 0 0 NEPSGSLHGLMR RDLPLRMAEFGSCHRNEPSGSLHGLMRVRG CHRNEPSGSLHGLMRVRGFTQDDAHIFCTE R N E M R V 0 1 1 0 0 0 1 2 1 0 2 0 1 0 1 2 0 0 0 0 0 0 12 0 1 1 1296.6245 P0A8M3 P0A8M3 364 375 thrS Threonine--tRNA ligase yes yes 2;3 8.6821E-08 105.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 108300000 22731000 29372000 0 0 21817000 34379000 0 0 3330 147 3674 19983;19984;19985;19986;19987;19988;19989;19990 15052;15053;15054;15055;15056;15057;15058 15053 7 22731000 30066000 0 0 26318000 38084000 0 0 NFAVRGE ______________________________ QLHRYLFENFAVRGELVTVSETLQQILENH E N F G E L 1 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 7 1 0 1 791.3926 P0A6Y5 P0A6Y5 14 20 hslO 33 kDa chaperonin yes yes 2 0.016459 62.659 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32979000 4665200 0 8968100 9906200 0 0 0 9439200 3331 85 3675 19991;19992;19993;19994 15059 15059 1 71680000 0 76200000 75105000 0 0 0 54170000 NFDLSPLYR ______________________________ ______________________________ R N F Y R S 0 1 1 1 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 9 0 0 1 1123.5662 P0C054 P0C054 3 11 ibpA Small heat shock protein IbpA yes yes 2 0.00057809 60.59 By MS/MS By MS/MS 1 1 4739600 0 0 0 0 4739600 0 0 0 3332 267 3676 19995;19996 15060;15061 15060 2 0 0 0 0 5717400 0 0 0 NFDLVGQRA KLWLPKGELPYGEAANFDLVGQRALQIGEW PYGEAANFDLVGQRALQIGEWQGEPVWLVQ A N F R A L 1 1 1 1 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 9 1 0 0 1018.5196 P32664 P32664 35 43 nudC NADH pyrophosphatase yes yes 2 3.6097E-40 159.2 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41950000 3611900 3936000 0 0 8505700 25897000 0 0 3333 340 3677 19997;19998;19999;20000 15062;15063;15064;15065 15064 4 21803000 23557000 0 0 12109000 36916000 0 0 NFGGEQAAR DDGRIYQRPFGGQSKNFGGEQAARTAAAAD FGGQSKNFGGEQAARTAAAADRTGHALLHT K N F A R T 2 1 1 0 0 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 9 0 1 2 948.44134 P0AC41 P0AC41 125 133 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 4.9819E-05 106.36 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 163570000 57138000 45897000 2166500 1429100 26679000 26729000 1387500 2148400 3334 203 3678 20001;20002;20003;20004;20005;20006;20007;20008 15066;15067;15068;15069 15067 4 57138000 46980000 18408000 10834000 32183000 29610000 10679000 12329000 NFGKHPVTPWGVQTK AMNPVDHPHGGGEGRNFGKHPVTPWGVQTK NFGKHPVTPWGVQTKGKKTRSNKRTDKFIV R N F T K G 0 0 1 0 0 1 0 2 1 0 0 2 0 1 2 0 2 1 0 2 0 0 15 1 0 2 1694.8893 P60422 P60422 239 253 rplB 50S ribosomal protein L2 yes yes 3 1.9674E-18 119.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 328090000 132500000 85317000 0 0 56513000 53760000 0 0 3335 379 3679 20009;20010;20011;20012 15070;15071;15072;15073 15070 4 132500000 87330000 0 0 68172000 59554000 0 0 NFIASDQLALLPVTRRFIFLEE ARSGSPLVIGLGMGENFIASDQLALLPVTR LALLPVTRRFIFLEEGDIAEITRRSVNIFD E N F E E G 2 2 1 1 0 1 2 0 0 2 4 0 0 3 1 1 1 0 0 1 0 0 22 2 1 3 2591.4112 P17169 P17169 188 209 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 4.1586E-47 118.52 By MS/MS By matching 1 1 239950000 0 0 0 0 107700000 132250000 0 0 3336 288 3680 20013;20014 15074 15074 1 0 0 0 0 1658200000 2004400000 0 0 NFIASDQLALLPVTRRFIFLEEGDIAE ARSGSPLVIGLGMGENFIASDQLALLPVTR VTRRFIFLEEGDIAEITRRSVNIFDKTGAE E N F A E I 3 2 1 2 0 1 3 1 0 3 4 0 0 3 1 1 1 0 0 1 0 0 27 2 2 4 3076.6233 P17169 P17169 188 214 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 0.0082432 23.675 By MS/MS 1 41983000 0 0 0 0 0 41983000 0 0 3337 288 3681 20015 15075 15075 1 0 0 0 0 0 636320000 0 0 NFIDAIIK GASVRQDVLGDLMSRNFIDAIIKEKINPAG LGDLMSRNFIDAIIKEKINPAGAPTYVPGE R N F I K E 1 0 1 1 0 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 8 0 0 1 932.53312 P0A850 P0A850 74 81 tig Trigger factor yes yes 2 0.0055779 60.682 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36652000 9236000 10404000 0 0 6792900 10219000 0 0 3338 137 3682 20016;20017;20018;20019 15076;15077;15078;15079 15076 4 9236000 10649000 0 0 8194300 11321000 0 0 NFLLTEALR FNQFHPTALYHPQARNFLLTEALRGEGAYL YHPQARNFLLTEALRGEGAYLKRPDGTRFM R N F L R G 1 1 1 0 0 0 1 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 9 0 1 1 1075.6026 P10902 P10902 255 263 nadB L-aspartate oxidase yes yes 2 2.3248E-06 109.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 227400000 45909000 72786000 0 0 42219000 66483000 0 0 3339 274 3683 20020;20021;20022;20023 15080;15081;15082;15083 15083 4 45909000 74504000 0 0 50929000 73648000 0 0 NFLVPQGK GSLGDQVNVKAGYARNFLVPQGKAVPATKK VKAGYARNFLVPQGKAVPATKKNIEFFEAR R N F G K A 0 0 1 0 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 8 0 0 1 901.50215 P0A7R1 P0A7R1 28 35 rplI 50S ribosomal protein L9 yes yes 2 0.0042046 64.757 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46667000 12026000 13127000 0 0 10240000 11274000 0 0 3340 119 3684 20024;20025;20026;20027 15084;15085;15086;15087 15087 4 12026000 13436000 0 0 12353000 12489000 0 0 NFPIQLSGGEQQR VSAALDKVGLLDKAKNFPIQLSGGEQQRVG AKNFPIQLSGGEQQRVGIARAVVNKPAVLL K N F Q R V 0 1 1 0 0 3 1 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1 1 1472.7372 P0A9R7 P0A9R7 133 145 ftsE Cell division ATP-binding protein FtsE yes yes 2 0.0046209 53.028 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 147870000 33976000 37781000 0 0 43152000 32964000 0 0 3341 174 3685 20028;20029;20030;20031 15088;15089;15090 15089 3 33976000 38673000 0 0 52055000 36517000 0 0 NFSGETTR PVPQDLELNYALLMRNFSGETTRNPHGK__ NYALLMRNFSGETTRNPHGK__________ R N F T R N 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 1 2 0 0 0 0 0 8 0 1 0 910.41446 P76403 P76403 441 448 yegQ Uncharacterized protease YegQ yes yes 2 0.0082762 75.109 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26407000 10341000 7350500 0 0 4807900 3907700 0 0 3342 424 3686 20032;20033;20034;20035 15091;15092 15092 0 10341000 7524000 0 0 5799700 4328800 0 0 NFVFDER RKAREQGLPVRFIGKNFVFDERMGERISDE LPVRFIGKNFVFDERMGERISDEIIAHCHQ K N F E R M 0 1 1 1 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 7 0 1 0 925.42938 P24188 P24188 248 254 yceA UPF0176 protein YceA yes yes 2 0.0090376 57.177 By MS/MS By MS/MS By MS/MS 1 1 1 21119000 6986900 5412100 0 0 0 8720200 0 0 3343 310 3687 20036;20037;20038 15093;15094;15095 15095 3 6986900 5539800 0 0 0 9660000 0 0 NFYTGIAHGEQE SVESNFALRELVGEENFYTGIAHGEQERLQ GEENFYTGIAHGEQERLQLALKVLREGGIY E N F Q E R 1 0 1 0 0 1 2 2 1 1 0 0 0 1 0 0 1 0 1 0 0 0 12 0 1 1 1364.5997 P33602 P33602 336 347 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 7.5312E-10 96.331 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 96932000 8562200 0 21902000 18541000 6801000 4519800 19048000 17559000 3344 345 3688 20039;20040;20041;20042;20043;20044;20045 15096;15097;15098;15099;15100;15101;15102;15103;15104 15104 9 131560000 0 186100000 140570000 104710000 68505000 146600000 100770000 NGEDPVAIR VEASLDRLNRWNNNRNGEDPVAIRKALQEC RWNNNRNGEDPVAIRKALQECMQHNFSVFR R N G I R K 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 9 0 1 2 969.48796 P0AC41 P0AC41 452 460 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 2.2626E-13 127.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41007000 12943000 9851300 0 0 8793500 9419000 0 0 3345 203 3689 20046;20047;20048;20049 15105;15106;15107;15108 15107 4 12943000 10084000 0 0 10608000 10434000 0 0 NGEDPVAIRK VEASLDRLNRWNNNRNGEDPVAIRKALQEC WNNNRNGEDPVAIRKALQECMQHNFSVFRE R N G R K A 1 1 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 1 0 0 10 1 1 2 1097.5829 P0AC41 P0AC41 452 461 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 0.0062326 21.372 By MS/MS By MS/MS By MS/MS 1 1 1 6666400 4270500 0 0 0 2395900 0 0 0 3346 203 3690 20050;20051;20052 15109;15110 15110 2 4270500 0 0 0 2890200 0 0 0 NGLLSIQSWSPR FRAITDYGVTGRAVKNGLLSIQSWSPRDFT AVKNGLLSIQSWSPRDFTHDRHRTVDDRPY K N G P R D 0 1 1 0 0 1 0 1 0 1 2 0 0 0 1 3 0 1 0 0 0 0 12 0 0 1 1356.715 P0A873 P0A873 28 39 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 9.1542E-06 79.974 By matching By matching By matching By MS/MS By matching 1 1 1 2 1 52817000 14811000 12534000 0 538720 10610000 14323000 0 0 3347 140 3691 20053;20054;20055;20056;20057;20058 15111 15111 1 14811000 12830000 0 4084300 26722000 15866000 0 0 NGPQLADLVK THLQWHIEQENIDTRNGPQLADLVKLLGER NIDTRNGPQLADLVKLLGERCKTLKEMAQS R N G V K L 1 0 1 1 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 10 0 0 2 1053.5819 P04805 P04805 336 345 gltX Glutamate--tRNA ligase yes yes 2 1.0214E-12 109.11 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24564000 12523000 12040000 0 0 0 0 0 0 3348 45 3692 20059;20060;20061;20062 15112;15113;15114;15115 15115 4 12523000 12325000 0 0 0 0 0 0 NGSEVAAQPAGLSGPAEVGPGAVGE ATGTEAGPGTAGGSENGSEVAAQPAGLSGP GLSGPAEVGPGAVGERTPRKKEPPRASPPG E N G G E R 5 0 1 0 0 1 3 6 0 0 1 0 0 0 3 2 0 0 0 3 0 0 25 0 2 8 2220.0659 LSD1-FL-His LSD1-FL-His 35 59 yes yes 2 1.7184E-142 186.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 119650000 0 0 21546000 19698000 15574000 13753000 22855000 26223000 3349 24 3693 20063;20064;20065;20066;20067;20068 15116;15117;15118;15119;15120;15121 15119 6 0 0 183070000 149340000 239770000 208450000 175900000 150490000 NGSEVLVAASTVEKA VHRTPRHIYAQVIAPNGSEVLVAASTVEKA NGSEVLVAASTVEKAIAEQLKYTGNKDAAA P N G K A I 3 0 1 0 0 0 2 1 0 0 1 1 0 0 0 2 1 0 0 3 0 0 15 1 2 2 1473.7675 P0C018 P0C018 43 57 rplR 50S ribosomal protein L18 yes yes 2 1.7303E-05 56.225 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9465900 1370400 1220400 0 0 2720700 4154400 0 0 3350 266 3694 20069;20070;20071;20072 15122;15123;15124 15122 2 8272600 7304100 0 0 3873400 5922100 0 0 NGYSCVPVALAEGLDIK QDDDFEFTGSHLTVRNGYSCVPVALAEGLD YSCVPVALAEGLDIKLNTAVRQVRYTASGC R N G I K L 2 0 1 1 1 0 1 2 0 1 2 1 0 0 1 1 0 0 1 2 0 0 17 0 1 3 1804.9029 LSD1-FL-His LSD1-FL-His 571 587 yes yes 2;3 1.764E-154 209.7 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2783600000 809030000 906770000 0 0 448750000 619050000 0 0 3351 24 3695 20073;20074;20075;20076;20077;20078;20079;20080 15125;15126;15127;15128;15129;15130;15131;15132 15129 8 809030000 928170000 0 0 541320000 685770000 0 0 NHCEILQGNAR VINQQTRMRQGFYERNHCEILQGNARFVDE FYERNHCEILQGNARFVDEHTLALDCPDGS R N H A R F 1 1 2 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 11 0 1 1 1310.615 P27306 P27306 108 118 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2;3 1.3635E-05 103.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 33719000 9886600 11049000 0 0 3435600 9348200 0 0 3352 323 3696 20081;20082;20083;20084;20085;20086;20087 15133;15134;15135;15136;15137;15138;15139 15134 7 9886600 11309000 0 0 4144400 10356000 0 0 NHDTGVSPVFAGGVEYAITPEIATR GMVWRADTKSNVYGKNHDTGVSPVFAGGVE AGGVEYAITPEIATRLEYQWTNNIGDAHTI K N H T R L 3 1 1 1 0 0 2 3 1 2 0 0 0 1 2 1 3 0 1 3 0 0 25 0 2 5 2600.2871 P0A910 P0A910 135 159 ompA Outer membrane protein A yes yes 3 0.0013243 32.778 By MS/MS 1 6930500 0 0 0 0 6930500 0 0 0 3353 158 3697 20088 15140 15140 1 0 0 0 0 8360200 0 0 0 NHDYPQPVKNVLAE GELVTVSETLQQILENHDYPQPVKNVLAEL ENHDYPQPVKNVLAELLVATSLLTATLKFD E N H A E L 1 0 2 1 0 1 1 0 1 0 1 1 0 0 2 0 0 0 1 2 0 0 14 1 0 3 1622.8053 P0A6Y5 P0A6Y5 34 47 hslO 33 kDa chaperonin yes yes 3 0.00080797 55.841 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 34765000 2545000 0 7020700 8814900 1123100 1473200 8009400 5778400 3354 85 3698 20089;20090;20091;20092;20093;20094;20095 15141;15142;15143 15142 3 39103000 0 59654000 66831000 17291000 22328000 61642000 33161000 NHEEEMKDLR MQIESLTEELAYLKKNHEEEMKDLRNVSTG AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP K N H L R N 0 1 1 1 0 0 3 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 10 1 3 0 1299.5877 CON__P13645 CON__P13645 286 295 yes yes 2;3 1.1192E-92 197.27 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 681910000 134370000 156310000 0 0 187420000 203810000 0 0 + 3355 12 3699;3700 20096;20097;20098;20099;20100;20101;20102;20103;20104;20105;20106;20107 15144;15145;15146;15147;15148;15149;15150;15151;15152;15153;15154 15146 13 10 134370000 160000000 0 0 226090000 225780000 0 0 NHEEEMNALR MQIESLKEELAYLKKNHEEEMNALRGQVGG AYLKKNHEEEMNALRGQVGGDVNVEMDAAP K N H L R G 1 1 2 0 0 0 3 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 3 1 1241.5459 CON__P02533;CON__Q6IFX2 CON__P02533 252 261 no no 2 1.903E-28 149.94 By matching By MS/MS By matching 1 1 1 17240000 0 3741600 0 0 6991700 6506900 0 0 + 3356 4 3701 20108;20109;20110 15155 15155 1 0 3829900 0 0 8434100 7208200 0 0 NHEPLRE HVSEHIVVVHNGIIENHEPLREELKARGYT VVHNGIIENHEPLREELKARGYTFVSETDT E N H R E E 0 1 1 0 0 0 2 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 7 1 1 1 893.43553 P17169 P17169 104 110 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.018066 73.039 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 211670000 0 0 43536000 50644000 0 0 61772000 55717000 3357 288 3702 20111;20112;20113;20114 15156 15156 1 0 0 369920000 383960000 0 0 475410000 319750000 NHEPLREE HVSEHIVVVHNGIIENHEPLREELKARGYT VHNGIIENHEPLREELKARGYTFVSETDTE E N H E E L 0 1 1 0 0 0 3 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 8 1 2 1 1022.4781 P17169 P17169 104 111 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 5.3784E-08 111.95 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1458500000 124030000 130090000 242870000 234740000 0 59162000 292320000 375270000 3358 288 3703 20115;20116;20117;20118;20119;20120;20121 15157;15158;15159;15160 15160 4 1905700000 1984000000 2063600000 1779700000 0 896680000 2249700000 2153600000 NHFAEPAAR PAPRSIPENRVAAGRNHFAEPAAREPVAPR RVAAGRNHFAEPAAREPVAPRYTPAPASGS R N H A R E 3 1 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 9 0 1 4 1011.4886 P23367 P23367 361 369 mutL DNA mismatch repair protein MutL yes yes 2 2.3191E-19 138.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44377000 12222000 15890000 0 0 8266900 7997900 0 0 3359 302 3704 20122;20123;20124;20125 15161;15162;15163;15164 15162 4 12222000 16265000 0 0 9972400 8859900 0 0 NHGGEFVLR VGGARTALYSWLFARNHGGEFVLRIEDTDL SWLFARNHGGEFVLRIEDTDLERSTPEAIE R N H L R I 0 1 1 0 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 1 0 0 9 0 1 0 1027.5199 P04805 P04805 32 40 gltX Glutamate--tRNA ligase yes yes 2 0.00131 87.696 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51807000 13596000 13063000 0 0 12669000 12479000 0 0 3360 45 3705 20126;20127;20128;20129 15165;15166;15167;15168 15168 4 13596000 13371000 0 0 15282000 13824000 0 0 NHKEEMSQLTGQNSGDVNVEINVAPGK MQYETLQEELMALKKNHKEEMSQLTGQNSG NSGDVNVEINVAPGKDLTKTLNDMRQEYEQ K N H G K D 1 0 4 1 0 2 3 3 1 1 1 2 1 0 1 2 1 0 0 3 0 0 27 1 3 2 2894.3828 CON__P35527 CON__P35527 291 317 yes yes 3 3.0156E-11 54.259 By MS/MS By matching 1 1 13624000 0 0 0 0 9079700 4544300 0 0 + 3361 15 3706 20130;20131 15169 15169 23 1 0 0 0 0 10953000 5034100 0 0 NHLDDYVIGQEQAK PHRERSALPTPHEIRNHLDDYVIGQEQAKK RNHLDDYVIGQEQAKKVLAVAVYNHYKRLR R N H A K K 1 0 1 2 0 2 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 0 14 0 1 1 1628.7794 P0A6H1 P0A6H1 72 85 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 2;3 4.8877E-05 69.258 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 29967000 2670000 14811000 0 0 2868200 9617200 0 0 3362 70 3707 20132;20133;20134;20135;20136;20137;20138;20139 15170;15171;15172;15173;15174;15175 15173 6 2670000 15161000 0 0 3460000 10654000 0 0 NHNLIMTR GQQAGALVEALLVLRNHNLIMTRLESRPIH EALLVLRNHNLIMTRLESRPIHGNPWEEMF R N H T R L 0 1 2 0 0 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 8 0 0 0 997.51273 P0A9J8 P0A9J8 320 327 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 9.4689E-73 183.26 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 523300000 130420000 171220000 0 0 111490000 110170000 0 0 3363 166 3708;3709 20140;20141;20142;20143;20144;20145;20146;20147 15176;15177;15178;15179;15180;15181;15182;15183 15180 158 8 130420000 175260000 0 0 134500000 122050000 0 0 NHTIVSNESAEIIR HYSGRVTVPVLWDKKNHTIVSNESAEIIRM KNHTIVSNESAEIIRMFNTAFDALGAKAGD K N H I R M 1 1 2 0 0 0 2 0 1 3 0 0 0 0 0 2 1 0 0 1 0 0 14 0 2 1 1581.8111 P42620 P42620 141 154 yqjG Glutathionyl-hydroquinone reductase YqjG yes yes 3 0.0014984 49.988 By MS/MS 1 3650000 0 3650000 0 0 0 0 0 0 3364 367 3710 20148 15184 15184 1 0 3736200 0 0 0 0 0 0 NIAHDDKPGLYFHEE FANRGESYKVSILDENIAHDDKPGLYFHEE NIAHDDKPGLYFHEEYVDMCRGPHVPNMRF E N I E E Y 1 0 1 2 0 0 2 1 2 1 1 1 0 1 1 0 0 0 1 0 0 0 15 1 1 2 1783.8166 P0A8M3 P0A8M3 163 177 thrS Threonine--tRNA ligase yes yes 3 0.00021371 58.817 By MS/MS By MS/MS 1 1 20606000 10003000 10603000 0 0 0 0 0 0 3365 147 3711 20149;20150 15185;15186 15186 2 153690000 161700000 0 0 0 0 0 0 NIAIEHSGYSVFAGVGER GAGVGKTVNMMELIRNIAIEHSGYSVFAGV IEHSGYSVFAGVGERTREGNDFYHEMTDSN R N I E R T 2 1 1 0 0 0 2 3 1 2 0 0 0 1 0 2 0 0 1 2 0 0 18 0 2 2 1904.9381 P0ABB4 P0ABB4 166 183 atpD ATP synthase subunit beta yes yes 3 1.8936E-08 79.311 By matching By MS/MS By MS/MS 1 1 1 24011000 3779000 0 0 0 11345000 8887200 0 0 3366 194 3712 20151;20152;20153 15187 15187 1 3779000 0 0 0 13685000 9845000 0 0 NIDVDDMNR AKGVSAPKAPRHLPKNIDVDDMNRLLDIDI PRHLPKNIDVDDMNRLLDIDINDPLAVRDR K N I N R L 0 1 2 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 9 0 0 0 1090.4713 P0A8P6 P0A8P6 113 121 xerC Tyrosine recombinase XerC yes yes 2 6.9987E-61 179.21 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 125100000 35358000 33716000 0 0 30364000 25660000 0 0 3367 150 3713;3714 20154;20155;20156;20157;20158;20159;20160;20161 15188;15189;15190;15191;15192;15193 15193 147 6 35358000 34512000 0 0 36628000 28426000 0 0 NIEFFEAR NFLVPQGKAVPATKKNIEFFEARRAELEAK AVPATKKNIEFFEARRAELEAKLAEVLAAA K N I A R R 1 1 1 0 0 0 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 8 0 2 1 1024.4978 P0A7R1 P0A7R1 43 50 rplI 50S ribosomal protein L9 yes yes 2 0.00079398 98.997 By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 44554000 11283000 12789000 0 0 9707000 10776000 0 0 3368 119 3715 20162;20163;20164;20165;20166 15194;15195;15196 15196 3 28918000 13090000 0 0 11710000 11937000 0 0 NIGARRLHTVLE KRIAEAAWQVNESTENIGARRLHTVLERLM STENIGARRLHTVLERLMEEISYDASDLSG E N I L E R 1 2 1 0 0 0 1 1 1 1 2 0 0 0 0 0 1 0 0 1 0 0 12 2 0 1 1377.7841 P0A6H5 P0A6H5 389 400 hslU ATP-dependent protease ATPase subunit HslU yes yes 3 0.00066978 59.198 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 42855000 4730100 5226300 0 0 1186100 0 12452000 19260000 3369 71 3716 20167;20168;20169;20170;20171 15197;15198 15198 2 72676000 79702000 0 0 18261000 0 95833000 110530000 NIGISAHIDAGK ______________________________ RYRNIGISAHIDAGKTTTTERILFYTGVNH R N I G K T 2 0 1 1 0 0 0 2 1 3 0 1 0 0 0 1 0 0 0 0 0 0 12 0 0 2 1194.6357 P0A6M8 P0A6M8 12 23 fusA Elongation factor G yes yes 2 0.021315 36.514 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 1 42576000 8406800 0 4041200 3663600 3034200 8778800 5208200 9443600 3370 76 3717 20172;20173;20174;20175;20176;20177;20178;20179 15199 15199 1 129170000 0 34337000 27776000 46715000 31964000 40083000 54195000 NIIQLLR TICTPYFNLPAILVRNIIQLLREGKKVEII NLPAILVRNIIQLLREGKKVEIIVGDKTAN R N I L R E 0 1 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 868.54944 P23830 P23830 283 289 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 2 0.0053165 61.997 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21613000 4989200 4476100 0 0 4489700 7657700 0 0 3371 304 3718 20180;20181;20182;20183 15200;15201;15202;15203 15200 4 4989200 4581800 0 0 5416000 8483000 0 0 NIKTLPAKRNE ETGFSGAKITGPKNENIKTLPAKRNEQDQK PKNENIKTLPAKRNEQDQKQLIVPLADSLK E N I N E Q 1 1 2 0 0 0 1 0 0 1 1 2 0 0 1 0 1 0 0 0 0 0 11 3 0 2 1282.7357 P0AA57 P0AA57 72 82 yobA Protein YobA yes yes 2;3 8.4706E-38 149.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 2 2 24192000000 416130000 537230000 4956900000 5017100000 253270000 337000000 4968800000 7705800000 3372 184 3719 20184;20185;20186;20187;20188;20189;20190;20191;20192;20193;20194;20195;20196;20197;20198;20199;20200;20201 15204;15205;15206;15207;15208;15209;15210;15211;15212;15213;15214;15215;15216;15217;15218;15219 15210 14 6390600000 8191000000 42118000000 38038000000 3899400000 5107700000 38241000000 44223000000 NILGDVFHR PKITFIGAGSTIFVKNILGDVFHREALKTA STIFVKNILGDVFHREALKTAHIALMDIDP K N I H R E 0 1 1 1 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 9 0 0 0 1069.5669 P06720 P06720 20 28 melA Alpha-galactosidase yes yes 2 0.0020909 73.248 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21086000 5214100 3987000 0 0 5638100 6246900 0 0 3373 52 3720 20202;20203;20204;20205 15220;15221;15222;15223 15220 4 5214100 4081100 0 0 6801200 6920100 0 0 NILLVADHTK VNEANVVKTMMAHARNILLVADHTKYHASA MAHARNILLVADHTKYHASAAVEIGNVAQV R N I T K Y 1 0 1 1 0 0 0 0 1 1 2 1 0 0 0 0 1 0 0 1 0 0 10 0 0 1 1122.6397 P32144 P32144 206 215 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 3.1825E-28 147.51 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 78908000 26066000 21517000 0 0 13027000 18297000 0 0 3374 339 3721 20206;20207;20208;20209 15224;15225;15226;15227 15225 4 26066000 22025000 0 0 15715000 20269000 0 0 NILMIGPTGVGK RMQLNEELRHEVTPKNILMIGPTGVGKTEI TPKNILMIGPTGVGKTEIARRLAKLANAPF K N I G K T 0 0 1 0 0 0 0 3 0 2 1 1 1 0 1 0 1 0 0 1 0 0 12 0 0 1 1198.6744 P0A6H5 P0A6H5 52 63 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 1.5515E-07 103.26 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 46604000 11349000 13940000 652990 0 10383000 10279000 0 0 3375 71 3722 20210;20211;20212;20213;20214 15228;15229;15230;15231;15232 15228 5 11349000 14269000 5548300 0 12525000 11387000 0 0 NIPVGSTVHNVEMK GVDAAIKPGNTLPMRNIPVGSTVHNVEMKP RNIPVGSTVHNVEMKPGKGGQLARSAGTYV R N I M K P 0 0 2 0 0 0 1 1 1 1 0 1 1 0 1 1 1 0 0 3 0 0 14 0 1 1 1523.7766 P60422 P60422 134 147 rplB 50S ribosomal protein L2 yes yes 2;3 6.997E-11 94.767 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 59925000 21946000 10433000 0 0 11519000 16027000 0 0 3376 379 3723 20215;20216;20217;20218;20219 15233;15234;15235;15236 15236 3 21946000 10680000 0 0 13895000 17754000 0 0 NIPVGSTVHNVEMKPGK GVDAAIKPGNTLPMRNIPVGSTVHNVEMKP PVGSTVHNVEMKPGKGGQLARSAGTYVQIV R N I G K G 0 0 2 0 0 0 1 2 1 1 0 2 1 0 2 1 1 0 0 3 0 0 17 1 1 2 1805.9458 P60422 P60422 134 150 rplB 50S ribosomal protein L2 yes yes 2;3;4 7.2631E-45 159.22 By MS/MS By MS/MS By MS/MS By MS/MS 5 4 5 4 1210500000 275360000 358690000 0 0 296830000 279640000 0 0 3377 379 3724;3725;3726 20220;20221;20222;20223;20224;20225;20226;20227;20228;20229;20230;20231;20232;20233;20234;20235;20236;20237 15237;15238;15239;15240;15241;15242;15243;15244;15245;15246;15247;15248;15249;15250;15251;15252;15253;15254 15245 302 31 16 275360000 367160000 0 0 358070000 309780000 0 0 NIPVGSTVHNVEMKPGKGGQLAR GVDAAIKPGNTLPMRNIPVGSTVHNVEMKP HNVEMKPGKGGQLARSAGTYVQIVARDGAY R N I A R S 1 1 2 0 0 1 1 4 1 1 1 2 1 0 2 1 1 0 0 3 0 0 23 2 1 3 2388.2696 P60422 P60422 134 156 rplB 50S ribosomal protein L2 yes yes 4 1.3493E-47 134.9 By MS/MS By MS/MS 1 1 50323000 24124000 26199000 0 0 0 0 0 0 3378 379 3727 20238;20239 15255;15256 15255 2 24124000 26817000 0 0 0 0 0 0 NIRVLERSNA REVETTLVSKALNHPNIRVLERSNAVDLIV ALNHPNIRVLERSNAVDLIVSDKIGLPGTR P N I N A V 1 2 2 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 10 2 1 0 1170.6469 P10902 P10902 153 162 nadB L-aspartate oxidase yes yes 3 0.0022719 58.63 By MS/MS 1 15839000 0 0 0 0 0 15839000 0 0 3379 274 3728 20240 15257 15257 1 0 0 0 0 0 22579000 0 0 NISPHLQR YYEIVWDEEQTHKFKNISPHLQRIKAFKTL EQTHKFKNISPHLQRIKAFKTLG_______ K N I Q R I 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 8 0 0 1 963.52501 P0A8E1 P0A8E1 165 172 ycfP UPF0227 protein YcfP yes yes 2 1.3052E-07 121.99 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 731120000 152080000 235470000 0 0 181920000 161650000 0 0 3380 143 3729 20241;20242;20243;20244;20245;20246 15258;15259;15260;15261;15262 15262 5 156530000 245340000 0 0 219450000 179080000 0 0 NITAHYR SFKIEGRYKDMSYVKNITAHYRQMLDAIIE YKDMSYVKNITAHYRQMLDAIIEERGDLAR K N I Y R Q 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 7 0 0 1 873.4457 P76104 P76104 253 259 ydcP Uncharacterized protease YdcP yes yes 2 0.003683 64.776 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 3381 416 3730 20247;20248 15263;15264 15263 2 0 0 0 0 0 0 0 0 NIVDGNHQMEPGMPESFNVLLK TVKSDDVNGRTKMYKNIVDGNHQMEPGMPE QMEPGMPESFNVLLKEIRSLGINIELEDE_ K N I L K E 0 0 3 1 0 1 2 2 1 1 2 1 2 1 2 1 0 0 0 2 0 0 22 0 2 2 2468.1828 P0A8V2 P0A8V2 1307 1328 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.0037372 30.652 By MS/MS By MS/MS 1 1 11722000 0 0 0 0 6242400 5479700 0 0 3382 154 3731 20249;20250 15265 15265 1 0 0 0 0 7530200 6070300 0 0 NKDGIPAVVER GGGHKQAYRIVDFKRNKDGIPAVVERLEYD DFKRNKDGIPAVVERLEYDPNRSANIALVL R N K E R L 1 1 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 11 1 1 2 1196.6513 P60422 P60422 70 80 rplB 50S ribosomal protein L2 yes yes 2;3 7.9376E-11 135.86 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 2231700000 533910000 619790000 0 0 521320000 556700000 0 0 3383 379 3732 20251;20252;20253;20254;20255;20256;20257;20258;20259;20260 15266;15267;15268;15269;15270;15271;15272;15273;15274 15274 9 545140000 634420000 0 0 628870000 622620000 0 0 NKELMDNMR SAYEDPKEVIEFYSKNKELMDNMRNVALEE IEFYSKNKELMDNMRNVALEEQAVEAVLAK K N K M R N 0 1 2 1 0 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 9 1 1 0 1149.5271 P0A850 P0A850 391 399 tig Trigger factor yes yes 2 0.016195 53.968 By MS/MS 1 2990300 2990300 0 0 0 0 0 0 0 3384 137 3733 20261 15275 15275 1 2990300 0 0 0 0 0 0 0 NKHQQHLAQLPK ______________________________ FKRNKHQQHLAQLPKISQSVDDVDFFYAPA R N K P K I 1 0 1 0 0 3 0 0 2 0 2 2 0 0 1 0 0 0 0 0 0 0 12 1 0 2 1440.795 P23830 P23830 8 19 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase yes yes 4 0.011026 26.707 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 28681000 10189000 6297600 0 0 5775100 6418800 0 0 3385 304 3734 20262;20263;20264;20265 15276;15277 15277 2 10189000 6446300 0 0 6966500 7110600 0 0 NKLNDLEDALQQAK SDAEQRGENALKDAKNKLNDLEDALQQAKE KNKLNDLEDALQQAKEDLARLLRDYQELMN K N K A K E 2 0 2 2 0 2 1 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 14 1 1 2 1598.8264 CON__P04264 CON__P04264 442 455 yes yes 2;3 0 364.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 831340000 142230000 78618000 0 0 313290000 297200000 0 0 + 3386 9 3735 20266;20267;20268;20269;20270;20271;20272;20273 15278;15279;15280;15281;15282;15283;15284;15285 15279 8 142230000 80473000 0 0 377920000 329230000 0 0 NKLNDLEDALQQAKEDLAR SDAEQRGENALKDAKNKLNDLEDALQQAKE DLEDALQQAKEDLARLLRDYQELMNTKLAL K N K A R L 3 1 2 3 0 2 2 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 19 2 2 3 2183.1182 CON__P04264 CON__P04264 442 460 yes yes 3 1.7368E-290 257.93 By MS/MS By MS/MS By MS/MS 1 1 1 138270000 0 13862000 0 0 75462000 48944000 0 0 + 3387 9 3736 20274;20275;20276 15286;15287;15288 15287 3 0 14189000 0 0 91030000 54219000 0 0 NKLNDLEEALQQAK ADAEQRGEHALKDARNKLNDLEEALQQAKE RNKLNDLEEALQQAKEDLARLLRDYQELMN R N K A K E 2 0 2 1 0 2 2 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 14 1 2 2 1612.842 CON__P35908v2;CON__P35908 CON__P35908v2 440 453 yes no 2 8.9786E-34 123.2 By MS/MS By MS/MS 1 1 110910000 0 0 0 0 56064000 54846000 0 0 + 3388 16 3737 20277;20278 15289;15290 15289 0 0 0 0 0 67631000 60757000 0 0 NKLNDLEEALQQAKEDLAR ADAEQRGEHALKDARNKLNDLEEALQQAKE DLEEALQQAKEDLARLLRDYQELMNVKLAL R N K A R L 3 1 2 2 0 2 3 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 19 2 3 3 2197.1339 CON__P35908v2;CON__P35908 CON__P35908v2 440 458 yes no 3 8.1533E-107 187.31 By MS/MS By MS/MS 1 1 23787000 0 0 0 0 0 23787000 0 0 + 3389 16 3738 20279;20280 15291;15292 15292 2 0 0 0 0 0 26351000 0 0 NKLPPFIEIYR ______________________________ ______________________________ K N K Y R A 0 1 1 0 0 0 1 0 0 2 1 1 0 1 2 0 0 0 1 0 0 0 11 1 1 2 1388.7816 P23908 P23908 3 13 argE Acetylornithine deacetylase yes yes 2;3 5.3115E-09 125.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 450140000 113860000 86808000 0 0 131920000 117550000 0 0 3390 308 3739 20281;20282;20283;20284;20285;20286;20287;20288;20289;20290 15293;15294;15295;15296;15297;15298;15299;15300;15301 15293 9 113860000 88856000 0 0 159140000 130220000 0 0 NKSEITDEEYKEFYK ISWEKINKAQALWTRNKSEITDEEYKEFYK NKSEITDEEYKEFYKHIAHDFNDPLTWSHN R N K Y K H 0 0 1 1 0 0 4 0 0 1 0 3 0 1 0 1 1 0 2 0 0 0 15 2 4 0 1921.8945 P0A6Z3 P0A6Z3 237 251 htpG Chaperone protein HtpG yes yes 3 1.384E-40 149.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 174660000 64816000 44944000 0 0 29848000 35053000 0 0 3391 88 3740 20291;20292;20293;20294 15302;15303;15304;15305 15302 4 64816000 46005000 0 0 36006000 38830000 0 0 NKVHIINLEK RYWNPKMKPFIFGARNKVHIINLEKTVPMF IFGARNKVHIINLEKTVPMFNEALAELNKI R N K E K T 0 0 2 0 0 0 1 0 1 2 1 2 0 0 0 0 0 0 0 1 0 0 10 1 1 0 1206.7085 P0A7V0 P0A7V0 36 45 rpsB 30S ribosomal protein S2 yes yes 3 3.6612E-06 107.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 65107000 33858000 19650000 0 0 6475700 5123600 0 0 3392 128 3741 20295;20296;20297;20298 15306;15307;15308;15309 15307 4 33858000 20113000 0 0 7811600 5675900 0 0 NKYEDEINK DSELKNMQDMVEDYRNKYEDEINKRTNAEN MVEDYRNKYEDEINKRTNAENEFVTIKKDV R N K N K R 0 0 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 1 2 0 1151.5459 CON__P04264;CON__H-INV:HIT000016045;CON__P48668;CON__P04259;CON__P02538;CON__Q8VED5;CON__P13647 CON__P04264 268 276 no no 2 3.4958E-91 196.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64304000 8186200 7276300 0 0 28519000 20322000 0 0 + 3393 9;13;5 3742 20299;20300;20301;20302 15310;15311;15312;15313 15313 4 8186200 7448000 0 0 34402000 22513000 0 0 NKYEDEINKR DSELKNMQDMVEDYRNKYEDEINKRTNAEN VEDYRNKYEDEINKRTNAENEFVTIKKDVD R N K K R T 0 1 2 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 10 2 2 0 1307.647 CON__P04264;CON__H-INV:HIT000016045;CON__P48668;CON__P04259;CON__P02538;CON__Q8VED5;CON__P13647 CON__P04264 268 277 no no 2;3 1.4848E-130 215.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2238600000 459010000 373290000 0 0 608530000 797750000 0 0 + 3394 9;13;5 3743 20303;20304;20305;20306;20307;20308;20309;20310 15314;15315;15316;15317;15318;15319;15320;15321 15320 8 459010000 382100000 0 0 734070000 883730000 0 0 NLAEGVPR AYPGDEVREIEVRGRNLAEGVPRGFTLNSN EIEVRGRNLAEGVPRGFTLNSNEILEALQE R N L P R G 1 1 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 8 0 1 2 854.46102 P0A9X4 P0A9X4 240 247 mreB Rod shape-determining protein MreB yes yes 2 0.00058337 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 29595000 8268800 7108200 0 0 7167000 7051100 0 0 3395 180 3744 20311;20312;20313;20314;20315 15322;15323;15324;15325 15323 4 8268800 7275900 0 0 8796300 7811100 0 0 NLAELPASAAHSHQHVVK EHGKVDGHLLDLPRRNLAELPASAAHSHQH ELPASAAHSHQHVVKKGLAALSLPEHQRWR R N L V K K 4 0 1 0 0 1 1 0 3 0 2 1 0 0 1 2 0 0 0 2 0 0 18 0 1 5 1907.9966 P33030 P33030 197 214 yeiR Uncharacterized protein YeiR yes yes 3;4 4.5365E-31 123.14 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 181970000 51535000 47741000 0 0 25747000 56950000 0 0 3396 343 3745 20316;20317;20318;20319;20320;20321;20322 15326;15327;15328;15329;15330;15331;15332;15333;15334;15335 15333 10 51535000 48867000 0 0 31059000 63088000 0 0 NLAELPASAAHSHQHVVKK EHGKVDGHLLDLPRRNLAELPASAAHSHQH LPASAAHSHQHVVKKGLAALSLPEHQRWRR R N L K K G 4 0 1 0 0 1 1 0 3 0 2 2 0 0 1 2 0 0 0 2 0 0 19 1 1 5 2036.0916 P33030 P33030 197 215 yeiR Uncharacterized protein YeiR yes yes 3;4 0.0046237 32.181 By MS/MS By MS/MS By matching By matching 2 2 1 1 20580000 7966900 9752500 0 0 1621300 1239400 0 0 3397 343 3746 20323;20324;20325;20326;20327;20328 15336;15337;15338;15339;15340 15340 4 7966900 9982700 0 0 1955700 1372900 0 0 NLAENTLNAYR LARIEQFLDALWLEKNLAENTLNAYRRDLS WLEKNLAENTLNAYRRDLSMMVEWLHHRGL K N L Y R R 2 1 3 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 11 0 1 2 1277.6364 P0A8P8 P0A8P8 20 30 xerD Tyrosine recombinase XerD yes yes 2 1.4011E-177 226.47 By matching By MS/MS By matching By MS/MS 1 1 1 1 413920000 93034000 99690000 0 0 91481000 129710000 0 0 3398 151 3747 20329;20330;20331;20332 15341 15341 1 93034000 102040000 0 0 110350000 143690000 0 0 NLAENTLNAYRR LARIEQFLDALWLEKNLAENTLNAYRRDLS LEKNLAENTLNAYRRDLSMMVEWLHHRGLT K N L R R D 2 2 3 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 12 1 1 2 1433.7375 P0A8P8 P0A8P8 20 31 xerD Tyrosine recombinase XerD yes yes 3 0.018607 23.118 By MS/MS 1 4037800 4037800 0 0 0 0 0 0 0 3399 151 3748 20333 15342 15342 1 4037800 0 0 0 0 0 0 0 NLAKSVTVE YHVALIKGTDVDQPRNLAKSVTVE______ DVDQPRNLAKSVTVE_______________ R N L V E - 1 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 9 1 0 1 959.52876 P17169 P17169 601 609 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 2.5004E-06 89.296 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 2215100000 91797000 113890000 617930000 635850000 41914000 31672000 682000000 0 3400 288 3749 20334;20335;20336;20337;20338;20339;20340;20341;20342;20343;20344 15343;15344;15345;15346;15347 15344 3 91797000 116580000 5250500000 4820800000 50561000 35085000 5248800000 0 NLALTEE QSLGRTWLRRPELLENLALTEEQARLLAEF LRRPELLENLALTEEQARLLAEFKTEHAQQ E N L E E Q 1 0 1 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 7 0 1 1 788.3916 P0A873 P0A873 226 232 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 1 0.00087617 76.833 By MS/MS By matching By matching By matching 1 1 1 1 154120000 48797000 44376000 0 0 28221000 32728000 0 0 3401 140 3750 20345;20346;20347;20348 15348 15348 0 749760000 676730000 0 0 434480000 496040000 0 0 NLAYATLVDE AMAAGEKLFDWGGAENLAYATLVDEGIPVR WGGAENLAYATLVDEGIPVRLSGEDSGRGT E N L D E G 2 0 1 1 0 0 1 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 10 0 0 2 1107.5448 P0AFG3 P0AFG3 598 607 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.02106 41.652 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 19699000 1459700 1854100 4688400 3592300 1392300 1311100 3447500 1953400 3402 246 3751 20349;20350;20351;20352;20353;20354;20355;20356 15349;15350 15350 2 22427000 28276000 39836000 27235000 21436000 19872000 26533000 11210000 NLDHNWQQALTK PADLHKIRPHHPLNRNLDHNWQQALTKTSS LNRNLDHNWQQALTKTSSERRVAVDIELGG R N L T K T 1 0 2 1 0 2 0 0 1 0 2 1 0 0 0 0 1 1 0 0 0 0 12 0 0 1 1466.7266 P76104 P76104 393 404 ydcP Uncharacterized protease YdcP yes yes 3 0.00065932 60.301 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20596000 7817800 8465900 0 0 4312000 0 0 0 3403 416 3752 20357;20358;20359;20360 15351;15352;15353;15354 15351 4 7817800 8665700 0 0 5201600 0 0 0 NLDLDSIIAEVK SVTDTNVILSMDNSRNLDLDSIIAEVKAQY NSRNLDLDSIIAEVKAQYEEIAQRSKEEAE R N L V K A 1 0 1 2 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 1 0 0 12 0 1 1 1328.7187 CON__P35908v2;CON__P35908;CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__Q8VED5;CON__P13647 CON__P35908v2 342 353 no no 2 1.6383E-14 125.75 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1578400000 345370000 158210000 0 0 506010000 568790000 0 0 + 3404 16;13;5 3753 20361;20362;20363;20364;20365 15355;15356;15357;15358 15358 4 345370000 161940000 0 0 610410000 630210000 0 0 NLDLPGFTPAQK VDFKQAPQHAAYLVRNLDLPGFTPAQKKLL LVRNLDLPGFTPAQKKLLATLLLNQTNPVD R N L Q K K 1 0 1 1 0 1 0 1 0 0 2 1 0 1 2 0 1 0 0 0 0 0 12 0 0 3 1299.6823 P25552 P25552 383 394 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 8.6323E-37 183.67 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 336240000 94442000 55707000 0 7644100 90974000 80101000 7372500 0 3405 316 3754 20366;20367;20368;20369;20370;20371 15359;15360;15361 15359 3 94442000 57022000 0 57954000 109740000 88734000 56741000 0 NLEEFFAR AMAVDHEINMVSLVRNLEEFFARESCGWCT NMVSLVRNLEEFFARESCGWCTPCRDGLPW R N L A R E 1 1 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 2 1 1024.4978 P31979 P31979 341 348 nuoF NADH-quinone oxidoreductase subunit F yes yes 2 0.0022122 85.212 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28192000 8557500 5609500 0 0 5977600 8047500 0 0 3406 336 3755 20372;20373;20374;20375 15362;15363;15364 15362 3 8557500 5741900 0 0 7210800 8914800 0 0 NLEFANA YLSSRDRQILDWHFANLEFANATPLSTLSL QILDWHFANLEFANATPLSTLSLKHWDQDD A N L N A T 2 0 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 7 0 1 1 777.36572 LSD1-FL-His LSD1-FL-His 537 543 yes yes 1 6.6067E-40 162.95 By MS/MS By matching By matching By matching 1 1 1 1 451070000 36856000 39751000 0 0 110250000 264220000 0 0 3407 24 3756 20376;20377;20378;20379 15365 15365 0 222480000 237910000 0 0 156960000 376650000 0 0 NLEFNQFHP GDGIAMAWRAGCRVANLEFNQFHPTALYHP AGCRVANLEFNQFHPTALYHPQARNFLLTE A N L H P T 0 0 2 0 0 1 1 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 9 0 1 0 1144.5302 P10902 P10902 237 245 nadB L-aspartate oxidase yes yes 2 8.115E-06 110.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45169000 2230100 1977600 0 0 29908000 11054000 0 0 3408 274 3757 20380;20381;20382;20383 15366;15367 15367 2 13462000 11836000 0 0 42579000 15757000 0 0 NLEVMVK AAERCADAVKEYGIKNLEVMVKGPGPGRES AVKEYGIKNLEVMVKGPGPGRESTIRALNA K N L V K G 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 7 0 1 0 831.45242 P0A7R9 P0A7R9 81 87 rpsK 30S ribosomal protein S11 yes yes 2 0.0011665 102.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1332600000 420560000 323960000 7718700 10561000 279570000 290260000 0 0 3409 121 3758;3759 20384;20385;20386;20387;20388;20389;20390;20391;20392;20393 15368;15369;15370;15371;15372;15373;15374 15369 121 4 420560000 331600000 65585000 80069000 337250000 321540000 0 0 NLGQENFDAAEK SMGCVTWLERYFADRNLGQENFDAAEKAAR ADRNLGQENFDAAEKAAREVLRPVADELRY R N L E K A 2 0 2 1 0 1 2 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 12 0 2 2 1334.6103 P25552 P25552 176 187 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 1.5767E-56 163.38 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 365480000 79715000 98449000 0 4219500 80047000 96966000 0 6082000 3410 316 3760 20394;20395;20396;20397;20398;20399 15375;15376;15377;15378 15376 4 79715000 100770000 0 31990000 96561000 107420000 0 34904000 NLGVIVIDEEHDSSYK AIVIGTRSALFTPFKNLGVIVIDEEHDSSY LGVIVIDEEHDSSYKQQEGWRYHARDLAVY K N L Y K Q 0 0 1 2 0 0 2 1 1 2 1 1 0 0 0 2 0 0 1 2 0 0 16 0 2 0 1816.8843 P17888 P17888 313 328 priA Primosomal protein N yes yes 2 7.2702E-20 116.01 By matching By MS/MS 1 1 19337000 0 9370900 0 0 0 9966200 0 0 3411 290 3761 20400;20401 15379 15379 1 0 9592100 0 0 0 11040000 0 0 NLILSSPLADEK DHNNQHAPLFLQQLRNLILSSPLADEKLWV QLRNLILSSPLADEKLWVLGPVPALAPKRG R N L E K L 1 0 1 1 0 0 1 0 0 1 3 1 0 0 1 2 0 0 0 0 0 0 12 0 1 2 1298.7082 P17888 P17888 658 669 priA Primosomal protein N yes yes 2 1.5515E-07 103.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46114000 13787000 10538000 0 0 9544700 12244000 0 0 3412 290 3762 20402;20403;20404;20405 15380;15381;15382;15383 15381 4 13787000 10787000 0 0 11514000 13563000 0 0 NLKDFEAQLA KLVELMPQSRAKLDANLKDFEAQLASTETQ AKLDANLKDFEAQLASTETQVGNELAPLKG A N L L A S 2 0 1 1 0 1 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 10 1 1 1 1147.5873 P39172 P39172 176 185 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 0.00070675 63.48 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 3413 361 3763 20406;20407 15384;15385 15384 2 0 0 0 0 0 0 0 0 NLKSHDQGK IDARRPAMFVLENVKNLKSHDQGKTFRIIM VLENVKNLKSHDQGKTFRIIMQTLDELGYD K N L G K T 0 0 1 1 0 1 0 1 1 0 1 2 0 0 0 1 0 0 0 0 0 0 9 1 0 0 1025.5254 P0AED9 P0AED9 228 236 dcm DNA-cytosine methyltransferase yes yes 2 0.007441 66.682 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 98510000 29719000 32068000 0 0 21804000 14920000 0 0 3414 235 3764 20408;20409;20410;20411 15386;15387;15388;15389 15386 4 29719000 32825000 0 0 26302000 16528000 0 0 NLLAIVHPILR GAHAFMVGSSFLQSRNLLAIVHPILRNLME LQSRNLLAIVHPILRNLMEESGETVNMAVL R N L L R N 1 1 1 0 0 0 0 0 1 2 3 0 0 0 1 0 0 0 0 1 0 0 11 0 0 2 1257.7921 P16528 P16528 100 110 iclR Acetate operon repressor yes yes 2;3 2.09E-51 175.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 345870000 87387000 94428000 0 0 83661000 80392000 0 0 3415 285 3765 20412;20413;20414;20415;20416;20417;20418;20419 15390;15391;15392;15393;15394;15395;15396;15397 15392 8 87387000 96657000 0 0 100920000 89057000 0 0 NLPIETNIMDLEAAK EIRAVEDLVNTQIRRNLPIETNIMDLEAAK NLPIETNIMDLEAAKAKGAMALFGEKYDER R N L A K A 2 0 2 1 0 0 2 0 0 2 2 1 1 0 1 0 1 0 0 0 0 0 15 0 2 3 1670.8549 P00957 P00957 623 637 alaS Alanine--tRNA ligase yes yes 2 2.2181E-06 95.417 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33566000 10191000 8425200 0 0 7195800 7753900 0 0 3416 33 3766 20420;20421;20422;20423 15398;15399;15400;15401 15401 4 10191000 8624100 0 0 8680400 8589600 0 0 NLRLNGIDE YSIGDSYISELATRENLRLNGIDESSVKFL ELATRENLRLNGIDESSVKFLDSTADYPQQ E N L D E S 0 1 2 1 0 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 1042.5407 P42596 P42596 83 91 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 3.0828E-35 154.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 424410000 41036000 28293000 58282000 82835000 22097000 28532000 68858000 94479000 3417 366 3767 20424;20425;20426;20427;20428;20429;20430;20431 15402;15403;15404;15405;15406;15407;15408 15402 5 630500000 431470000 495210000 628020000 340200000 432450000 529950000 542200000 NLSEDEYYSEEERNA KRAKVEYREMDESLANLSEDEYYSEEERNA NLSEDEYYSEEERNAKAEKEKKLPPPPPQA A N L N A K 1 1 2 1 0 0 5 0 0 0 1 0 0 0 0 2 0 0 2 0 0 0 15 1 5 0 1846.7493 LSD1-FL-His LSD1-FL-His 131 145 yes yes 2;3 5.9445E-48 186.02 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 295790000 59425000 47767000 0 0 91153000 97449000 0 0 3418 24 3768 20432;20433;20434;20435;20436;20437 15409;15410;15411;15412;15413 15412 5 358720000 285890000 0 0 129770000 138910000 0 0 NLSEDEYYSEEERNAKA KRAKVEYREMDESLANLSEDEYYSEEERNA SEDEYYSEEERNAKAEKEKKLPPPPPQAPP A N L K A E 2 1 2 1 0 0 5 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 17 2 5 1 2045.8814 LSD1-FL-His LSD1-FL-His 131 147 yes yes 3 0.00083079 53.169 By MS/MS By MS/MS 1 1 5029200 2369300 0 0 0 0 2659900 0 0 3419 24 3769 20438;20439 15414 15414 1 14303000 0 0 0 0 3791700 0 0 NLSESNDYVPR AEHMLEVMSSIDGYKNLSESNDYVPRPASR DGYKNLSESNDYVPRPASRPVTKFEQRGHR K N L P R P 0 1 2 1 0 0 1 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1 1 1292.5997 P0A8I5 P0A8I5 200 210 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 2.2455E-64 174.41 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 404620000 105750000 80778000 0 0 93001000 125090000 0 0 3420 144 3770 20440;20441;20442;20443 15415;15416;15417;15418 15418 4 105750000 82684000 0 0 112190000 138570000 0 0 NLSESNDYVPRPASRPVTK AEHMLEVMSSIDGYKNLSESNDYVPRPASR SNDYVPRPASRPVTKFEQRGHRLGHGVWDL K N L T K F 1 2 2 1 0 0 1 0 0 0 1 1 0 0 3 3 1 0 1 2 0 0 19 2 1 4 2129.0865 P0A8I5 P0A8I5 200 218 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3;4 2.3819E-36 128.26 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 272300000 81015000 82539000 0 0 56342000 52401000 0 0 3421 144 3771 20444;20445;20446;20447;20448;20449;20450;20451 15419;15420;15421;15422;15423;15424;15425;15426 15423 8 81015000 84487000 0 0 67966000 58049000 0 0 NLSLESAIDKESDLLEPLR RRYSDTRRLHPLSSKNLSLESAIDKESDLL ESAIDKESDLLEPLRSRADLIVDTSEMSVH K N L L R S 1 1 1 2 0 0 3 0 0 1 5 1 0 0 1 3 0 0 0 0 0 0 19 1 3 2 2141.1216 P0A894 P0A894 109 127 rapZ RNase adapter protein RapZ yes yes 3 1.7779E-76 147.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 153410000 35070000 46271000 0 0 38824000 33242000 0 0 3422 141 3772 20452;20453;20454;20455 15427;15428 15428 2 35070000 47363000 0 0 46833000 36825000 0 0 NLSVHDAQIFTTR RPYLFAAVCAELDRRNLSVHDAQIFTTRDG RRNLSVHDAQIFTTRDGMAMDTFIVLEPDG R N L T R D 1 1 1 1 0 1 0 0 1 1 1 0 0 1 0 1 2 0 0 1 0 0 13 0 0 1 1500.7685 P27249 P27249 732 744 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 2.4491E-36 139.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 258800000 72380000 59697000 0 0 70875000 55849000 0 0 3423 320 3773 20456;20457;20458;20459;20460;20461;20462;20463 15429;15430;15431;15432;15433;15434;15435;15436;15437 15431 7 72380000 61106000 0 0 85497000 61868000 0 0 NLVQRVPKDVFMGVDE DVAVGANDAYGQYDENLVQRVPKDVFMGVD LVQRVPKDVFMGVDELQVGMRFLAETDQGP E N L D E L 0 1 1 2 0 1 1 1 0 0 1 1 1 1 1 0 0 0 0 4 0 0 16 2 0 1 1844.9455 P0A9K9 P0A9K9 74 89 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 5.0212E-111 213.73 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 5 8 5 12 9 6 7 55789000000 4974900000 5535100000 7281100000 3593900000 11779000000 12314000000 8742300000 1567500000 3424 169 3774;3775 20464;20465;20466;20467;20468;20469;20470;20471;20472;20473;20474;20475;20476;20477;20478;20479;20480;20481;20482;20483;20484;20485;20486;20487;20488;20489;20490;20491;20492;20493;20494;20495;20496;20497;20498;20499;20500;20501;20502;20503;20504;20505;20506;20507;20508;20509;20510;20511;20512;20513;20514;20515;20516;20517;20518;20519;20520;20521;20522;20523;20524 15438;15439;15440;15441;15442;15443;15444;15445;15446;15447;15448;15449;15450;15451;15452;15453;15454;15455;15456;15457;15458;15459;15460;15461;15462;15463;15464;15465;15466;15467;15468;15469;15470;15471;15472;15473;15474;15475;15476;15477;15478;15479;15480;15481;15482;15483;15484;15485;15486;15487;15488;15489;15490;15491;15492;15493;15494;15495 15456 160 57 76388000000 84398000000 61867000000 27247000000 181200000000 186590000000 67283000000 8995800000 NLVQVAELIVR YYAHFRVSNNLLELRNLVQVAELIVRCAMM LELRNLVQVAELIVRCAMMRKESRGLHFTL R N L V R C 1 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 0 3 0 0 11 0 1 1 1252.7503 P10902 P10902 492 502 nadB L-aspartate oxidase yes yes 2 2.141E-17 133.57 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 363320000 92697000 54193000 0 0 123800000 92629000 0 0 3425 274 3776 20525;20526;20527;20528 15496;15497;15498 15496 3 92697000 55472000 0 0 149340000 102610000 0 0 NMGAQMVKE GVSVAREIELEDKFENMGAQMVKEVASKAN LEDKFENMGAQMVKEVASKANDAAGDGTTT E N M K E V 1 0 1 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 9 1 0 1 1006.4576 P0A6F5 P0A6F5 68 76 groL 60 kDa chaperonin yes yes 2 1.1032E-18 139.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 5 3 4 6 4 3 4 5777300000 414280000 506080000 1127500000 1282300000 213970000 226120000 658170000 1348900000 3426 68 3777;3778;3779 20529;20530;20531;20532;20533;20534;20535;20536;20537;20538;20539;20540;20541;20542;20543;20544;20545;20546;20547;20548;20549;20550;20551;20552;20553;20554;20555;20556;20557;20558;20559;20560;20561;20562 15499;15500;15501;15502;15503;15504;15505;15506;15507;15508;15509;15510;15511;15512;15513;15514;15515;15516 15503 78;79 17 6365400000 7717800000 9580400000 9721600000 3294300000 3427100000 5065400000 7741100000 NMNVPGEDQYR LKARSIIVATGAKWRNMNVPGEDQYRTKGV AKWRNMNVPGEDQYRTKGVTYCPHCDGPLF R N M Y R T 0 1 2 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 1 0 0 11 0 1 1 1321.5721 P35340 P35340 328 338 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 3.3229E-95 191.85 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1538000000 424380000 400720000 0 0 384620000 328240000 0 0 3427 348 3780;3781 20563;20564;20565;20566;20567;20568;20569;20570 15517;15518;15519;15520;15521;15522;15523;15524 15521 285 8 424380000 410180000 0 0 463970000 363620000 0 0 NMQDLVEDFK DSIVGERGRLDSELRNMQDLVEDFKNKYED DSELRNMQDLVEDFKNKYEDEINKRTTAEN R N M F K N 0 0 1 2 0 1 1 0 0 0 1 1 1 1 0 0 0 0 0 1 0 0 10 0 1 0 1237.5649 CON__P13647 CON__P13647 246 255 no no 2 7.1175E-11 124.23 By MS/MS By MS/MS 1 1 15182000 0 0 0 0 6713000 8469000 0 0 + 3428 13 3782 20571;20572 15525;15526 15526 2 0 0 0 0 8097900 9381700 0 0 NMQDMVEDYR DQLKSDQSRLDSELKNMQDMVEDYRNKYED DSELKNMQDMVEDYRNKYEDEINKRTNAEN K N M Y R N 0 1 1 2 0 1 1 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 10 0 1 0 1299.5224 CON__P04264 CON__P04264 258 267 yes yes 2 1.2677E-92 195.7 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 4 754010000 113790000 99812000 0 0 241810000 298600000 0 0 + 3429 9 3783;3784;3785 20573;20574;20575;20576;20577;20578;20579;20580;20581;20582;20583;20584;20585;20586 15527;15528;15529;15530;15531;15532;15533;15534;15535;15536;15537;15538;15539;15540 15540 4;5 14 113790000 102170000 0 0 291700000 330780000 0 0 NMRYHLA HHAFRVGFNANLRDPNMRYHLALLDGEVVG FNANLRDPNMRYHLALLDGEVVGMIGLHLQ P N M L A L 1 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 7 1 0 0 903.43851 P16691 P16691 46 52 phnO Protein PhnO yes yes 2 0.0011319 74.832 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 16469000 1310700 1910500 0 0 8788000 4459500 0 0 3430 286 3786 20587;20588;20589;20590 15541 15541 1 7912100 11435000 0 0 12511000 6357000 0 0 NMVTQWGFSEK TGASNDIKVATNLARNMVTQWGFSEKLGPL NLARNMVTQWGFSEKLGPLLYAEEEGEVFL R N M E K L 0 0 1 0 0 1 1 1 0 0 0 1 1 1 0 1 1 1 0 1 0 0 11 0 1 0 1325.6074 P0AAI3 P0AAI3 502 512 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 2 0.0046808 48.794 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51861000 12287000 12717000 0 0 12498000 14358000 0 0 3431 185 3787 20591;20592;20593;20594 15542;15543 15542 178 2 12287000 13018000 0 0 15076000 15906000 0 0 NNAKDDDVVDAEFEEVKDKK QQHAQQQTAGADASANNAKDDDVVDAEFEE DDVVDAEFEEVKDKK_______________ A N N K K - 2 0 2 5 0 0 3 0 0 0 0 4 0 1 0 0 0 0 0 3 0 0 20 3 3 2 2307.0866 P0A6Y8 P0A6Y8 619 638 dnaK Chaperone protein DnaK yes yes 4 3.5246E-31 85.231 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24005000 2293000 3846600 0 0 7268200 10597000 0 0 3432 86 3788 20595;20596;20597;20598 15544;15545 15545 2 13842000 23022000 0 0 10348000 15106000 0 0 NNASPADPQVH GNHYLFNAMDIAEIRNNASPADPQVH____ AEIRNNASPADPQVH_______________ R N N V H - 2 0 2 1 0 1 0 0 1 0 0 0 0 0 2 1 0 0 0 1 0 0 11 0 0 4 1148.521 P0A6Y5 P0A6Y5 282 292 hslO 33 kDa chaperonin yes yes 2 1.2382E-10 93.178 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 3433 85 3789 20599;20600;20601 15546;15547;15548 15546 3 0 0 0 0 0 0 0 0 NNEFNHENLQLGINEAHALGK DAVYAGQPRYSLRVRNNEFNHENLQLGINE ENLQLGINEAHALGKKFYVVVNIAPHNAKL R N N G K K 2 0 5 0 0 1 3 2 2 1 3 1 0 1 0 0 0 0 0 0 0 0 21 0 3 2 2361.1462 P76403 P76403 40 60 yegQ Uncharacterized protease YegQ yes yes 3;4 6.9648E-62 146.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 140070000 32780000 23208000 0 0 39688000 44399000 0 0 3434 424 3790 20602;20603;20604;20605;20606;20607;20608 15549;15550;15551;15552;15553;15554 15551 6 32780000 23756000 0 0 47876000 49184000 0 0 NNQHDVAIVR CSGKVYYDLLEQRRKNNQHDVAIVRIEQLY EQRRKNNQHDVAIVRIEQLYPFPHKAMQEV K N N V R I 1 1 2 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 10 0 0 1 1164.6 P0AFG3 P0AFG3 835 844 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2;3 6.6681E-22 167.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 108120000 12873000 69667000 0 0 15449000 10129000 0 0 3435 246 3791 20609;20610;20611;20612;20613 15555;15556;15557;15558;15559;15560 15556 6 12873000 71312000 0 0 18637000 11220000 0 0 NNRVVNFE GTSRKSIMELSGRTENNRVVNFEGTPDMIG ELSGRTENNRVVNFEGTPDMIGKFVDVEIT E N N F E G 0 1 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 1 0 0 990.48829 P0AEI1 P0AEI1 406 413 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.005967 94.163 By MS/MS By matching By matching By matching 1 1 1 1 19529000 0 0 4119600 3406500 0 0 4647100 7356000 3436 237 3792 20614;20615;20616;20617 15561 15561 1 0 0 35003000 25827000 0 0 35765000 42215000 NNSLSQEVQNAQHQR TITLLQMEIEELKEKNNSLSQEVQNAQHQR NNSLSQEVQNAQHQREELERENNHLKEQQN K N N Q R E 1 1 3 0 0 4 1 0 1 0 1 0 0 0 0 2 0 0 0 1 0 0 15 0 1 1 1751.8299 P0AF36 P0AF36 36 50 zapB Cell division protein ZapB yes yes 3 1.1129E-18 121.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 77300000 22426000 18422000 0 0 18822000 17630000 0 0 3437 242 3793 20618;20619;20620;20621 15562;15563;15564;15565;15566 15565 5 22426000 18857000 0 0 22705000 19530000 0 0 NNVVVSR GKELEFKVIKLDQKRNNVVVSRRAVIESEN VIKLDQKRNNVVVSRRAVIESENSAERDQL R N N S R R 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 7 0 0 0 786.4348 P0AG67 P0AG67 164 170 rpsA 30S ribosomal protein S1 yes yes 2 0.0089577 57.281 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17652000 5739500 5809300 0 0 3336900 2765900 0 0 3438 261 3794 20622;20623;20624;20625 15567;15568;15569;15570 15569 4 5739500 5946400 0 0 4025300 3064000 0 0 NNWGQTEQQQEPSAAR LAEERILDVLIPPAKNNWGQTEQQQEPSAA NWGQTEQQQEPSAARQAFRKKLREGQLDDK K N N A R Q 2 1 2 0 0 4 2 1 0 0 0 0 0 0 1 1 1 1 0 0 0 0 16 0 2 3 1842.8245 P0A6H5 P0A6H5 141 156 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 5.2829E-23 119.39 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29813000 7798100 10530000 0 0 6535200 4949100 0 0 3439 71 3795 20626;20627;20628;20629 15571;15572;15573;15574 15571 4 7798100 10779000 0 0 7883400 5482500 0 0 NPEFFIR LTELDDRAVVDYLIKNPEFFIRNARAVEAI AVVDYLIKNPEFFIRNARAVEAIRVPHPVR K N P I R N 0 1 1 0 0 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 7 0 1 1 921.47085 P23305 P23305 27 33 yigA Uncharacterized protein YigA yes yes 2 0.0037525 53.554 By MS/MS By MS/MS By MS/MS 1 1 1 9980000 6411400 0 0 0 0 3568600 0 0 3440 301 3796 20630;20631;20632 15575;15576 15576 2 6411400 0 0 0 0 3953200 0 0 NPPFVLK LGAPEVSSLWHQQQKNPPFVLKHNLYEY__ SLWHQQQKNPPFVLKHNLYEY_________ K N P L K H 0 0 1 0 0 0 0 0 0 0 1 1 0 1 2 0 0 0 0 1 0 0 7 0 0 2 813.47487 P36881 P36881 134 140 yadI Putative phosphotransferase enzyme IIA component YadI yes yes 2 0.0037415 69.432 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 3441 351 3797 20633;20634;20635;20636 15577;15578;15579;15580 15579 4 0 0 0 0 0 0 0 0 NPQVFFQVLR PERVWKETESALTTRNPQVFFQVLRDCGAL ALTTRNPQVFFQVLRDCGALRVLFPEIDAL R N P L R D 0 1 1 0 0 2 0 0 0 0 1 0 0 2 1 0 0 0 0 2 0 0 10 0 0 1 1246.6822 P06961 P06961 189 198 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 2 0.00044162 85.212 By MS/MS By MS/MS 1 1 7875200 4032100 3843100 0 0 0 0 0 0 3442 54 3798 20637;20638 15581;15582 15582 2 4032100 3933800 0 0 0 0 0 0 NPSISTHLLGSNASSVIR LAEELGADVVVIGSRNPSISTHLLGSNASS ISTHLLGSNASSVIRHANLPVLVVR_____ R N P I R H 1 1 2 0 0 0 0 1 1 2 2 0 0 0 1 5 1 0 0 1 0 0 18 0 0 2 1851.9803 P39177 P39177 115 132 uspG Universal stress protein G yes yes 3 0.0022711 35.133 By MS/MS By matching 1 1 18121000 9156500 8964800 0 0 0 0 0 0 3443 362 3799 20639;20640 15583 15583 1 9156500 9176400 0 0 0 0 0 0 NPVGLSGVR VIPQEYAIDYQEGIKNPVGLSGVRMQAKVH YQEGIKNPVGLSGVRMQAKVHLITCHNDMA K N P V R M 0 1 1 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 2 0 0 9 0 0 1 897.50321 P0ABH0 P0ABH0 145 153 ftsA Cell division protein FtsA yes yes 2 1.079E-06 113.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 168350000 44883000 48038000 0 0 35225000 40200000 0 0 3444 199 3800 20641;20642;20643;20644 15584;15585;15586;15587 15584 4 44883000 49171000 0 0 42492000 44533000 0 0 NQAILPLK GDSAGGSAKQGRNRKNQAILPLKGKILNVE KQGRNRKNQAILPLKGKILNVEKARFDKML K N Q L K G 1 0 1 0 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 0 8 0 0 2 895.5491 P0AES6 P0AES6 440 447 gyrB DNA gyrase subunit B yes yes 2 0.0028875 73.039 By MS/MS By MS/MS By MS/MS 1 1 1 85971000 26341000 0 0 0 26052000 33578000 0 0 3445 239 3801 20645;20646;20647 15588;15589;15590 15588 3 26341000 0 0 0 31427000 37197000 0 0 NQDLGPFISHEMNR GHSFRRYRFTKRTHRNQDLGPFISHEMNRC RNQDLGPFISHEMNRCIACYRCVRYYKDYA R N Q N R C 0 1 2 1 0 1 1 1 1 1 1 0 1 1 1 1 0 0 0 0 0 0 14 0 1 1 1656.7678 P33602 P33602 137 150 nuoG NADH-quinone oxidoreductase subunit G yes yes 2;3 1.9627E-39 160.15 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 353810000 88453000 65647000 0 0 133080000 66625000 0 0 3446 345 3802;3803 20648;20649;20650;20651;20652;20653;20654;20655;20656;20657;20658;20659 15591;15592;15593;15594;15595;15596;15597;15598;15599;15600;15601;15602;15603 15603 277 13 88453000 67197000 0 0 160540000 73806000 0 0 NQFRVGLVRVE HLGNRRIRSVGEMAENQFRVGLVRVERAVK EMAENQFRVGLVRVERAVKERLSLGDLDTL E N Q V E R 0 2 1 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 3 0 0 11 2 0 0 1315.7361 P0A8V2 P0A8V2 462 472 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.013383 39.266 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22785000 4063900 2809700 0 0 3057100 2398000 5164400 5291900 3447 154 3804 20660;20661;20662;20663;20664;20665 15604 15604 1 62441000 42848000 0 0 47066000 36345000 39747000 30369000 NQGDHLLHSTR NAEADRKFEELVQTRNQGDHLLHSTRKQVE VQTRNQGDHLLHSTRKQVEEAGDKLPADDK R N Q T R K 0 1 1 1 0 1 0 1 2 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 0 0 1276.6272 P0A6Y8 P0A6Y8 537 547 dnaK Chaperone protein DnaK yes yes 2;3 6.0641E-79 183 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 1570600000 487820000 498310000 0 0 271540000 312900000 0 0 3448 86 3805 20666;20667;20668;20669;20670;20671;20672;20673;20674 15605;15606;15607;15608;15609;15610;15611;15612 15606 7 487820000 510070000 0 0 340630000 346630000 0 0 NQGDHLLHSTRK NAEADRKFEELVQTRNQGDHLLHSTRKQVE QTRNQGDHLLHSTRKQVEEAGDKLPADDKT R N Q R K Q 0 1 1 1 0 1 0 1 2 0 2 1 0 0 0 1 1 0 0 0 0 0 12 1 0 0 1404.7222 P0A6Y8 P0A6Y8 537 548 dnaK Chaperone protein DnaK yes yes 3 0.0069802 33.685 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 61190000 24914000 26585000 0 0 4589600 5101600 0 0 3449 86 3806 20675;20676;20677;20678 15613;15614;15615 15613 3 24914000 27212000 0 0 5536400 5651500 0 0 NQIADLVGADPR HRFGWQAEEAVDIARNQIADLVGADPREIV IARNQIADLVGADPREIVFTSGATESDNLA R N Q P R E 2 1 1 2 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 12 0 0 3 1267.6521 P0A6B7 P0A6B7 56 67 iscS Cysteine desulfurase IscS yes yes 2 5.0385E-11 73.067 By MS/MS By MS/MS 1 2 0 0 0 0 0 0 0 0 0 3450 67 3807 20679;20680;20681 15616;15617;15618 15618 3 0 0 0 0 0 0 0 0 NQIQPIAER SARLRLAGWHKYLTRNQIQPIAEREGDWSA HKYLTRNQIQPIAEREGDWSAMSGFQQTMQ R N Q E R E 1 1 1 0 0 2 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 9 0 1 2 1067.5724 B8LFD5;P03023 B8LFD5 211 219 lacI Lactose operon repressor yes no 2 0.0028515 77.058 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20400000 6105600 4406700 0 0 4901700 4986300 0 0 3451 0 3808 20682;20683;20684;20685 15619;15620;15621;15622 15622 4 6105600 4510700 0 0 5913000 5523800 0 0 NQTPRSQKPDVNAKE GIGFHKGIHQLANVENQTPRSQKPDVNAKE NQTPRSQKPDVNAKEGGNVSAGAIGLLGGV E N Q K E G 1 1 2 1 0 2 1 0 0 0 0 2 0 0 2 1 1 0 0 1 0 0 15 3 0 3 1710.8649 P69741 P69741 314 328 hybO Hydrogenase-2 small chain yes yes 3 0.0028847 42.568 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 24531000 1023900 783890 6236000 4543700 312940 0 5962700 5668000 3452 403 3809 20686;20687;20688;20689;20690;20691;20692 15623;15624;15625;15626 15625 4 15732000 11954000 52987000 34448000 4817900 0 45890000 32528000 NQVVHFDFR AIIVNLEYDPTAAFRNQVVHFDFRKLDVFS PTAAFRNQVVHFDFRKLDVFSFGENQNCLV R N Q F R K 0 1 1 1 0 1 0 0 1 0 0 0 0 2 0 0 0 0 0 2 0 0 9 0 0 0 1160.5727 P00936 P00936 568 576 cyaA Adenylate cyclase yes yes 3 0.01163 34.721 By MS/MS By matching By MS/MS By matching 1 1 1 1 31437000 8755600 8858300 0 0 6483200 7339900 0 0 3453 31 3810 20693;20694;20695;20696 15627;15628 15627 2 8755600 9067400 0 0 7820700 8130900 0 0 NRPTFAYGR AHIITYGKPPKLDDKNRPTFAYGRLIHEHC PKLDDKNRPTFAYGRLIHEHCERRPHFDAG K N R G R L 1 2 1 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 9 1 0 2 1080.5465 P69741 P69741 218 226 hybO Hydrogenase-2 small chain yes yes 3 0.00045391 88.177 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21252000 7808400 7154800 0 0 2603800 3685500 0 0 3454 403 3811 20697;20698;20699;20700 15629;15630;15631;15632 15630 4 7808400 7323600 0 0 3141000 4082700 0 0 NSGAFIE ______________________________ TQTLSQLENSGAFIERHIGPDAAQQQEMLN E N S I E R 1 0 1 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 7 0 0 1 736.33917 P33195 P33195 10 16 gcvP Glycine dehydrogenase (decarboxylating) yes yes 1 0.0050325 94.262 By matching By matching By MS/MS 1 1 1 12398000 0 0 3850700 0 0 0 3753600 4793500 3455 344 3812 20701;20702;20703 15633 15633 1 0 0 32719000 0 0 0 28889000 27509000 NSLGGIKDMGGLPDALFVIDADHE KKEALMRTRELEKLENSLGGIKDMGGLPDA GGLPDALFVIDADHEHIAIKEANNLGIPVF E N S H E H 2 0 1 4 0 0 1 4 1 2 3 1 1 1 1 1 0 0 0 1 0 0 24 1 0 3 2483.2002 P0A7V0 P0A7V0 146 169 rpsB 30S ribosomal protein S2 yes yes 3 1.7672E-63 123.48 By MS/MS By MS/MS By MS/MS 2 2 1 332270000 0 0 0 0 121620000 209230000 0 1418700 3456 128 3813;3814 20704;20705;20706;20707;20708 15634;15635;15636;15637;15638 15637 123 5 0 0 0 0 1872500000 3171200000 0 8141700 NSLMITLSQSGETADTLAGLR EIASEFRYRKSAVRRNSLMITLSQSGETAD LSQSGETADTLAGLRLSKELGYLGSLAICN R N S L R L 2 1 1 1 0 1 1 2 0 1 4 0 1 0 0 3 3 0 0 0 0 0 21 0 1 2 2177.0998 P17169 P17169 341 361 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 4.3773E-153 206.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 1 59837000 7832300 9716300 0 0 20663000 21625000 0 0 3457 288 3815 20709;20710;20711;20712;20713;20714;20715 15639;15640;15641;15642;15643 15641 248 5 13839000 9945600 0 0 98913000 23956000 0 0 NSLTLGSHILK LQQVLFDLVQTDTIKNSLTLGSHILKKIKP DTIKNSLTLGSHILKKIKPVHKLHSRNTEQ K N S L K K 0 0 1 0 0 0 0 1 1 1 3 1 0 0 0 2 1 0 0 0 0 0 11 0 0 0 1181.6768 P36548 P36548 200 210 amiA N-acetylmuramoyl-L-alanine amidase AmiA yes yes 2 0.0074797 63.184 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31607000 10201000 6604800 0 0 7046400 7754200 0 0 3458 349 3816 20716;20717;20718;20719 15644;15645;15646 15644 3 10201000 6760700 0 0 8500100 8589900 0 0 NSYICPQR SFSCPLCHQPLSREKNSYICPQRHQFDMAK QPLSREKNSYICPQRHQFDMAKEGYVNLLP K N S Q R H 0 1 1 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 8 0 0 1 1036.476 P36999 P36999 17 24 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 0.0017495 90.777 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 27173000 7582800 7023700 0 0 6545100 6021800 0 0 3459 352 3817 20720;20721;20722;20723 15647;15648;15649 15648 3 7582800 7189500 0 0 7895300 6670800 0 0 NSYVIGDRA KLVERYLAEQAMDRANSYVIGDRATDIQLA QAMDRANSYVIGDRATDIQLAENMGITGLR A N S R A T 1 1 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 1 0 0 993.48796 P06987 P06987 124 132 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 0.010966 66.692 By MS/MS By MS/MS By MS/MS 1 1 1 27093000 11340000 9385100 0 0 6367900 0 0 0 3460 55 3818 20724;20725;20726 15650;15651;15652 15650 2 68456000 56170000 0 0 9065900 0 0 0 NTADEDAAE VMEEAPDADDLMLAENTADEDAAEAAAQVL DLMLAENTADEDAAEAAAQVLSSVESEIGR E N T A E A 3 0 1 2 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 9 0 1 3 934.35158 P00579 P00579 70 78 rpoD RNA polymerase sigma factor RpoD yes yes 1 0.0001516 86.833 By MS/MS By matching By matching By matching 1 1 1 1 9057100 0 0 1856000 1824900 0 0 2303600 3072700 3461 27 3819 20727;20728;20729;20730 15653 15653 1 0 0 15770000 13835000 0 0 17729000 17634000 NTASDQVTQHVHFVDK EKLLHNPLEIEVARRNTASDQVTQHVHFVD TASDQVTQHVHFVDKKRKRELLSHMIGKGN R N T D K K 1 0 1 2 0 2 0 0 2 0 0 1 0 1 0 1 2 0 0 3 0 0 16 0 0 1 1824.8755 P25888 P25888 214 229 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 4.9194E-69 179.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 820160000 210790000 174990000 0 0 212580000 221800000 0 0 3462 318 3820 20731;20732;20733;20734;20735;20736;20737;20738 15654;15655;15656;15657;15658;15659;15660 15660 7 210790000 179120000 0 0 256440000 245710000 0 0 NTASDQVTQHVHFVDKK EKLLHNPLEIEVARRNTASDQVTQHVHFVD ASDQVTQHVHFVDKKRKRELLSHMIGKGNW R N T K K R 1 0 1 2 0 2 0 0 2 0 0 2 0 1 0 1 2 0 0 3 0 0 17 1 0 1 1952.9704 P25888 P25888 214 230 rhlE ATP-dependent RNA helicase RhlE yes yes 3;4 6.7562E-37 137.14 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 202430000 68618000 51033000 0 0 47787000 34995000 0 0 3463 318 3821 20739;20740;20741;20742;20743;20744;20745 15661;15662;15663;15664;15665;15666;15667 15662 7 68618000 52238000 0 0 57645000 38767000 0 0 NTELEQLINEK ______________________________ ______________________________ K N T E K L 0 0 2 0 0 1 3 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 3 0 1329.6776 P0AFP6 P0AFP6 3 13 ybgI Putative GTP cyclohydrolase 1 type 2 yes yes 2 0.00011128 88.134 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 26436000 6857900 5144300 0 0 6656300 7777500 0 0 3464 249 3822 20746;20747;20748;20749 15668;15669;15670 15669 3 6857900 5265800 0 0 8029500 8615700 0 0 NTEQAAFVVLK HILKKIKPVHKLHSRNTEQAAFVVLKSPSV LHSRNTEQAAFVVLKSPSVPSVLVETSFIT R N T L K S 2 0 1 0 0 1 1 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 11 0 1 2 1218.6608 P36548 P36548 222 232 amiA N-acetylmuramoyl-L-alanine amidase AmiA yes yes 2 0.00021583 95.358 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34746000 10405000 7737400 0 0 8421500 8181400 0 0 3465 349 3823 20750;20751;20752;20753 15671;15672;15673;15674 15672 4 10405000 7920000 0 0 10159000 9063200 0 0 NTHGTGCTLSAALAALRPR REGEQRFTAPRIMTKNTHGTGCTLSAALAA TGCTLSAALAALRPRHTNWADTVQEAKSWL K N T P R H 4 2 1 0 1 0 0 2 1 0 3 0 0 0 1 1 3 0 0 0 0 0 19 1 0 5 1966.0167 P76422 P76422 207 225 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 3;4 2.5165E-124 193.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 414570000 113690000 118610000 0 0 75441000 106830000 0 0 3466 425 3824 20754;20755;20756;20757;20758;20759;20760;20761 15675;15676;15677;15678;15679;15680;15681;15682;15683 15683 9 113690000 121410000 0 0 91004000 118340000 0 0 NTTIPTK GIETMGGVMTTLIAKNTTIPTKHSQVFSTA VMTTLIAKNTTIPTKHSQVFSTAEDNQSAV K N T T K H 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 3 0 0 0 0 0 7 0 0 1 773.42832 P0A6Y8 P0A6Y8 415 421 dnaK Chaperone protein DnaK yes yes 2 1.8856E-07 94.662 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 668790000 224780000 202150000 0 0 128380000 112320000 1169000 0 3467 86 3825 20762;20763;20764;20765;20766 15684;15685;15686;15687;15688 15684 3 224780000 206920000 0 0 154860000 124420000 8996600 0 NTVKGGDGNYGYNAA RQIVLNCGEEPSVVANTVKGGDGNYGYNAA NTVKGGDGNYGYNAATEEYGNMIDMGILDP A N T A A T 2 0 3 1 0 0 0 4 0 0 0 1 0 0 0 0 1 0 2 1 0 0 15 1 0 1 1499.6641 P0A6F5 P0A6F5 467 481 groL 60 kDa chaperonin yes yes 2 5.5398E-13 92.943 By MS/MS By matching By MS/MS 1 1 1 46715000 10164000 12412000 0 0 0 24139000 0 0 3468 68 3826 20767;20768;20769 15689 15689 1 61354000 74288000 0 0 0 34410000 0 0 NTVSQMVYK QGQIESFDQFVILLKNTVSQMVYKHAISTV FVILLKNTVSQMVYKHAISTVVPSRPVSHH K N T Y K H 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 1 0 1 2 0 0 9 0 0 0 1068.5274 P0A6X3 P0A6X3 48 56 hfq RNA-binding protein Hfq yes yes 2 1.1217E-13 145.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 371320000 98459000 119050000 0 0 73218000 80593000 0 0 3469 84 3827;3828 20770;20771;20772;20773;20774 15690;15691;15692;15693;15694;15695 15691 89 6 98459000 121860000 0 0 88324000 89279000 0 0 NVAKALKGRGA SGTNAGSLEVIQAAANVAKALKGRGADVGI QAAANVAKALKGRGADVGITMIARSVNSMG A N V G A D 3 1 1 0 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 1 0 0 11 3 0 2 1083.6513 P33602 P33602 515 525 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 0.012642 43.308 By MS/MS By MS/MS By MS/MS 1 1 1 9754700 2005100 2286400 0 0 0 5463200 0 0 3470 345 3829 20775;20776;20777 15696;15697 15697 0 12104000 13684000 0 0 0 7787800 0 0 NVALEEQAVEAVLAK IEFYSKNKELMDNMRNVALEEQAVEAVLAK NVALEEQAVEAVLAKAKVTEKETTFNELMN R N V A K A 4 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 3 0 0 15 0 3 4 1582.8566 P0A850 P0A850 400 414 tig Trigger factor yes yes 2 1.4262E-23 128.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57868000 15413000 16125000 0 0 10998000 15332000 0 0 3471 137 3830 20778;20779;20780;20781 15698;15699;15700;15701 15699 4 15413000 16505000 0 0 13267000 16985000 0 0 NVDGEIDCSGK VDGVGILRGIEANIKNVDGEIDCSGKMFDS ANIKNVDGEIDCSGKMFDSLDLIIAGFHEP K N V G K M 0 0 1 2 1 0 1 2 0 1 0 1 0 0 0 1 0 0 0 1 0 0 11 0 1 0 1192.503 P75914 P75914 78 88 ycdX Probable phosphatase YcdX yes yes 2 0.00021578 78.655 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20579000 7635900 6657900 0 0 3199800 3085600 0 0 3472 412 3831 20782;20783;20784;20785 15702;15703;15704;15705 15702 4 7635900 6815100 0 0 3860000 3418100 0 0 NVDIILNAQTTEVK MKADQVLQDKLRSLKNVDIILNAQTTEVKG KNVDIILNAQTTEVKGDGSKVVGLEYRDRV K N V V K G 1 0 2 1 0 1 1 0 0 2 1 1 0 0 0 0 2 0 0 2 0 0 14 0 1 1 1556.841 P35340 P35340 405 418 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 2.6287E-190 229.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 323540000 66450000 52353000 0 0 102680000 102060000 0 0 3473 348 3832 20786;20787;20788;20789;20790 15706;15707;15708;15709;15710;15711;15712 15712 7 66450000 53589000 0 0 136340000 113060000 0 0 NVDIILNAQTTEVKGDGSK MKADQVLQDKLRSLKNVDIILNAQTTEVKG ILNAQTTEVKGDGSKVVGLEYRDRVSGDIH K N V S K V 1 0 2 2 0 1 1 2 0 2 1 2 0 0 0 1 2 0 0 2 0 0 19 1 1 1 2001.0378 P35340 P35340 405 423 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 3.4212E-235 243.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 431990000 126630000 143410000 0 0 62321000 99631000 0 0 3474 348 3833 20791;20792;20793;20794;20795;20796;20797;20798 15713;15714;15715;15716;15717;15718;15719;15720;15721 15717 9 126630000 146800000 0 0 75177000 110370000 0 0 NVGVLLRGIKREE VEMFRKLLDEGRAGENVGVLLRGIKREEIE GENVGVLLRGIKREEIERGQVLAKPGTIKP E N V E E I 0 2 1 0 0 0 2 2 0 1 2 1 0 0 0 0 0 0 0 2 0 0 13 3 1 0 1481.8678 P0CE48;P0CE47 P0CE48 274 286 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3 0.00048342 60.628 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 160330000 9022700 6310600 26980000 28435000 10084000 7763500 29190000 42544000 3475 269 3834 20799;20800;20801;20802;20803;20804;20805;20806 15722;15723;15724;15725;15726;15727 15723 6 138630000 96238000 229240000 215580000 155250000 117670000 224650000 244150000 NVIEVAPLAYMR FEMLGFEKVEKLIERNVIEVAPLAYMRGRT IERNVIEVAPLAYMRGRTLNDAFIILDESQ R N V M R G 2 1 1 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 1 2 0 0 12 0 1 3 1374.733 P0A9K3 P0A9K3 219 230 ybeZ PhoH-like protein yes yes 2 7.2492E-05 72.928 By MS/MS By MS/MS By MS/MS 1 1 1 10402000 3581600 3428100 0 0 3392000 0 0 0 3476 168 3835 20807;20808;20809 15728;15729;15730 15728 1 3581600 3509000 0 0 4091800 0 0 0 NVMGVPAVFVNGK TAIDGGTFQNEITDRNVMGVPAVFVNGKEF DRNVMGVPAVFVNGKEFGQGRMTLTEIVAK R N V G K E 1 0 2 0 0 0 0 2 0 0 0 1 1 1 1 0 0 0 0 4 0 0 13 0 0 2 1330.7067 P35340 P35340 167 179 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.1319E-19 130.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 143490000 31693000 33653000 0 0 31432000 46710000 0 0 3477 348 3836;3837 20810;20811;20812;20813;20814;20815;20816;20817;20818;20819 15731;15732;15733;15734;15735;15736;15737 15734 281 6 31693000 34447000 0 0 37917000 51744000 0 0 NVQDAIADAEQR QRLQGEIAHVKKQCKNVQDAIADAEQRGEH QCKNVQDAIADAEQRGEHALKDARNKLNDL K N V Q R G 3 1 1 2 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 12 0 1 3 1328.6321 CON__P35908v2;CON__P35908 CON__P35908v2 419 430 yes no 2 4.226E-84 182.64 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 282650000 34691000 33929000 0 0 87688000 126340000 0 0 + 3478 16 3838 20820;20821;20822;20823 15738;15739;15740 15739 3 34691000 34729000 0 0 105780000 139960000 0 0 NVQDAIADAEQRGEHALK QRLQGEIAHVKKQCKNVQDAIADAEQRGEH DAIADAEQRGEHALKDARNKLNDLEEALQQ K N V L K D 4 1 1 2 0 2 2 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 18 1 2 4 1963.9712 CON__P35908v2;CON__P35908 CON__P35908v2 419 436 yes no 3 0.0014958 40.085 By MS/MS 1 9130900 0 9130900 0 0 0 0 0 0 + 3479 16 3839 20824 15741 15741 1 0 9346400 0 0 0 0 0 0 NVRNFLKQNIE GGVPNEFNGAVFINENVRNFLKQNIEDIHF FINENVRNFLKQNIEDIHFANDDQPNNPDN E N V I E D 0 1 3 0 0 1 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 2 0 0 1373.7415 CON__P0C1U8 CON__P0C1U8 269 279 yes yes 2;3 5.1997E-26 126.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 6911100000 942590000 959020000 303350000 246630000 1133300000 955280000 1017600000 1353200000 + 3480 11 3840 20825;20826;20827;20828;20829;20830;20831;20832;20833;20834;20835;20836;20837;20838;20839;20840 15742;15743;15744;15745;15746;15747;15748;15749;15750;15751;15752;15753;15754;15755;15756;15757;15758;15759 15747 17 14483000000 14625000000 2577600000 1869800000 17449000000 14479000000 7831800000 7765900000 NVRPTVE RSGKSELEAFEVALENVRPTVEVKSRRVGG EAFEVALENVRPTVEVKSRRVGGSTYQVPV E N V V E V 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 7 1 0 1 813.43447 P02359 P02359 68 74 rpsG 30S ribosomal protein S7 yes yes 2 0.014045 64.803 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 53755000 3337700 3023600 7404000 6244000 2993000 2794900 12167000 15791000 3481 36 3841 20841;20842;20843;20844;20845;20846;20847;20848 15760;15761 15761 2 51282000 46110000 62911000 47339000 46080000 42361000 93639000 90624000 NVSTGDVNVEMNAAPGVDLTQLLNNMR AYLKKNHEEEMKDLRNVSTGDVNVEMNAAP AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE R N V M R S 2 1 5 2 0 1 1 2 0 0 3 0 2 0 1 1 2 0 0 4 0 0 27 0 1 3 2871.3855 CON__P13645 CON__P13645 296 322 yes yes 3 4.1416E-20 86.084 By matching By matching By MS/MS By MS/MS 1 1 1 1 113770000 12528000 12371000 0 0 44462000 44407000 0 0 + 3482 12 3842 20849;20850;20851;20852 15762;15763;15764 15764 14;15 3 12528000 12663000 0 0 53634000 49193000 0 0 NVVHTAKSVRVRDE MVPISEEEVTQEDVENVVHTAKSVRVRDEH ENVVHTAKSVRVRDEHRVLHVIPQEYAIDY E N V D E H 1 2 1 1 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 4 0 0 14 3 0 1 1608.8696 P0ABH0 P0ABH0 111 124 ftsA Cell division protein FtsA yes yes 3;4 0.0001913 57.804 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 242320000 22088000 32099000 33803000 44072000 7205100 8788200 40157000 54106000 3483 199 3843 20853;20854;20855;20856;20857;20858;20859;20860;20861;20862;20863;20864;20865;20866;20867;20868 15765;15766;15767;15768;15769;15770;15771;15772;15773;15774;15775 15768 11 339380000 489510000 287220000 334130000 110930000 133200000 309050000 310500000 NVVLDKSFGAPTITK VLADAVKVTLGPKGRNVVLDKSFGAPTITK NVVLDKSFGAPTITKDGVSVAREIELEDKF R N V T K D 1 0 1 1 0 0 0 1 0 1 1 2 0 1 1 1 2 0 0 2 0 0 15 1 0 2 1588.8825 P0A6F5 P0A6F5 37 51 groL 60 kDa chaperonin yes yes 2 5.5033E-31 140.22 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 3484 68 3844 20869;20870 15776;15777 15777 12 0 0 0 0 0 0 0 0 0 NVVWHSHPVTVQQRE ______________________________ NVVWHSHPVTVQQRELHHGHRGVVLWFTGL E N V R E L 0 1 1 0 0 2 1 0 2 0 0 0 0 0 1 1 1 1 0 4 0 0 15 1 0 1 1814.9176 P0A6J1 P0A6J1 7 21 cysC Adenylyl-sulfate kinase yes yes 3;4 6.0366E-20 98.694 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 1 1 1 1 135180000 13684000 17709000 35106000 33706000 1232600 1102000 15046000 17590000 3485 73 3845 20871;20872;20873;20874;20875;20876;20877;20878;20879;20880;20881;20882 15778;15779;15780;15781;15782;15783;15784 15781 7 210260000 270070000 298290000 255540000 18978000 16703000 115790000 100950000 NYDVIKK DVEALEKRMHELAEKNYDVIKKKVSWHEAR RMHELAEKNYDVIKKKVSWHEARETFANRG K N Y K K K 0 0 1 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 1 1 0 0 7 1 0 0 878.48617 P0A8M3 P0A8M3 131 137 thrS Threonine--tRNA ligase yes yes 2 0.0050055 63.306 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 13625000 1039400 6456400 0 0 3070300 3058400 0 0 3486 147 3846 20883;20884;20885;20886;20887 15785;15786 15785 2 6274200 11168000 0 0 3703700 4359800 0 0 NYGSLIGEATAER GGDRFDEAIINYVRRNYGSLIGEATAERIK RRNYGSLIGEATAERIKHEIGSAYPGDEVR R N Y E R I 2 1 1 0 0 0 2 2 0 1 1 0 0 0 0 1 1 0 1 0 0 0 13 0 2 2 1379.6681 P0A9X4 P0A9X4 205 217 mreB Rod shape-determining protein MreB yes yes 2 3.7553E-05 56.359 By MS/MS 1 0 0 0 0 0 0 0 0 0 3487 180 3847 20888 15787 15787 1 0 0 0 0 0 0 0 0 NYISVPKTE GERFGGQILDTVDIENYISVPKTEGQKLAG DTVDIENYISVPKTEGQKLAGALKVHVDEY E N Y T E G 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 9 1 0 1 1049.5393 P35340 P35340 257 265 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 2.8698E-10 118.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1217700000 186940000 134480000 0 0 97162000 130100000 0 669070000 3488 348 3848 20889;20890;20891;20892;20893;20894 15788;15789;15790;15791 15788 2 2872200000 2050900000 0 0 1495900000 1898400000 0 3839700000 NYITESGK EGVQEIDYKDIATLKNYITESGKIVPSRIT KDIATLKNYITESGKIVPSRITGTRAKYQR K N Y G K I 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 8 0 1 0 910.43961 P0A7T7 P0A7T7 31 38 rpsR 30S ribosomal protein S18 yes yes 2 0.00060852 101.33 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 128410000 34859000 34076000 0 0 30121000 29350000 0 0 3489 125 3849 20895;20896;20897;20898 15792;15793;15794 15794 3 34859000 34881000 0 0 36335000 32513000 0 0 NYPATVHGALLSGLR QPIPRLFFAGEHTIRNYPATVHGALLSGLR NYPATVHGALLSGLREAGRIADQFLGAMYT R N Y L R E 2 1 1 0 0 0 0 2 1 0 3 0 0 0 1 1 1 0 1 1 0 0 15 0 0 3 1567.8471 LSD1-FL-His LSD1-FL-His 808 822 yes yes 2;3 1.8816E-23 142.83 By MS/MS By MS/MS By MS/MS By MS/MS 5 4 2 2 51863000000 17517000000 12460000000 0 0 10290000000 11596000000 0 0 3490 24 3850 20899;20900;20901;20902;20903;20904;20905;20906;20907;20908;20909;20910;20911 15795;15796;15797;15798;15799;15800;15801;15802;15803;15804;15805;15806;15807;15808;15809;15810;15811;15812 15802 17 17534000000 12763000000 0 0 12413000000 12845000000 0 0 NYRPVADAVAMLLAGNK PNRFHDFAQFVEEQKNYRPVADAVAMLLAG RPVADAVAMLLAGNKLSNDELNMLGEMIGE K N Y N K L 4 1 2 1 0 0 0 1 0 0 2 1 1 0 1 0 0 0 1 2 0 0 17 1 0 5 1801.9509 P60240 P60240 348 364 rapA RNA polymerase-associated protein RapA yes yes 3 0.0063377 32.995 By matching By MS/MS 1 1 6474500 3826100 0 0 0 2648400 0 0 0 3491 378 3851 20912;20913 15813 15813 1 3826100 0 0 0 3194800 0 0 0 NYSPYYNTIDDLK IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ QKNYSPYYNTIDDLKDQIVDLTVGNNKTLL K N Y L K D 0 0 2 2 0 0 0 0 0 1 1 1 0 0 1 1 1 0 3 0 0 0 13 0 0 1 1604.7359 CON__P35527 CON__P35527 200 212 yes yes 2 3.3678E-07 87.298 By MS/MS By matching 1 1 7262600 0 0 0 0 3721100 3541500 0 0 + 3492 15 3852 20914;20915 15814 15814 1 0 0 0 0 4488800 3923200 0 0 NYSPYYNTIDDLKDQIVDLTVGNNK IQDWYDKKGPAAIQKNYSPYYNTIDDLKDQ DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF K N Y N K T 0 0 4 4 0 1 0 1 0 2 2 2 0 0 1 1 2 0 3 2 0 0 25 1 0 1 2901.4032 CON__P35527 CON__P35527 200 224 yes yes 3 1.6683E-40 110.14 By MS/MS By MS/MS 1 1 185820000 0 0 0 0 148850000 36972000 0 0 + 3493 15 3853 20916;20917 15815;15816 15815 2 0 0 0 0 179560000 40957000 0 0 PAAPWPNAQPGYQK PVAPRYTPAPASGSRPAAPWPNAQPGYQKQ RPAAPWPNAQPGYQKQQGEVYRQLLQTPAP R P A Q K Q 3 0 1 0 0 2 0 1 0 0 0 1 0 0 4 0 0 1 1 0 0 0 14 0 0 7 1523.7521 P23367 P23367 386 399 mutL DNA mismatch repair protein MutL yes yes 2 1.7184E-11 103.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28439000 7415300 7093000 0 0 5059500 8871400 0 0 3494 302 3854 20918;20919;20920;20921 15817;15818;15819;15820 15817 4 7415300 7260400 0 0 6103200 9827600 0 0 PACELRP ______________________________ ______________________________ M P A R P A 1 1 0 0 1 0 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 7 1 1 2 841.41162 P16691 P16691 2 8 phnO Protein PhnO yes yes 2 0.01013 64.776 By MS/MS 1 0 0 0 0 0 0 0 0 0 3495 286 3855 20922 15821 15821 1 0 0 0 0 0 0 0 0 PADIIHVPFNDLHAVK SVGGQPKYSDGFGPKPADIIHVPFNDLHAV ADIIHVPFNDLHAVKAVMDDHTCAVVVEPI K P A V K A 2 0 1 2 0 0 0 0 2 2 1 1 0 1 2 0 0 0 0 2 0 0 16 0 0 4 1784.9574 P18335 P18335 165 180 argD Acetylornithine/succinyldiaminopimelate aminotransferase yes yes 4 0.001884 35.473 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50641000 12180000 15124000 0 0 10916000 12421000 0 0 3496 291 3856 20923;20924;20925;20926 15822;15823;15824;15825 15824 4 12180000 15481000 0 0 13168000 13760000 0 0 PAESFVPHNLAGEGPR DEKQAYRLDEALWARPAESFVPHNLAGEGP AESFVPHNLAGEGPRGGAPVEIAWPQKRSS R P A P R G 2 1 1 0 0 0 2 2 1 0 1 0 0 1 3 1 0 0 0 1 0 0 16 0 2 5 1676.8271 P28905 P28905 60 75 holC DNA polymerase III subunit chi yes yes 3 8.5899E-08 78.932 By MS/MS 1 15331000 0 0 0 0 0 15331000 0 0 3497 329 3857 20927 15826 15826 1 0 0 0 0 0 16983000 0 0 PAIQHVLDLK KYRLLRLTRRAGNARPAIQHVLDLKGQKVQ AGNARPAIQHVLDLKGQKVQAGLAPALITR R P A L K G 1 0 0 1 0 1 0 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 10 0 0 2 1132.6604 P17888 P17888 386 395 priA Primosomal protein N yes yes 2;3 0.0001727 76.282 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 59119000 16332000 11937000 0 0 10614000 20236000 0 0 3498 290 3858 20928;20929;20930;20931;20932;20933;20934 15827;15828;15829;15830;15831;15832 15828 5 16332000 12219000 0 0 12804000 22417000 0 0 PAMYGSYHHISALAADGR RHFVLVDAGFNDLMRPAMYGSYHHISALAA YGSYHHISALAADGRSLEHAPTVETVVAGP R P A G R S 4 1 0 1 0 0 0 2 2 1 1 0 1 0 1 2 0 0 2 0 0 0 18 0 0 5 1915.8999 P00861 P00861 308 325 lysA Diaminopimelate decarboxylase yes yes 3;4 1.9864E-12 86.378 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 74167000 23230000 21875000 0 0 4004000 25058000 0 0 3499 28 3859 20935;20936;20937;20938;20939;20940;20941 15833;15834;15835;15836;15837 15836 5 23230000 22391000 0 0 4830100 27759000 0 0 PAPFLIHQESNVIVR RLKHWEAIKKAAESRPAPFLIHQESNVIVR PAPFLIHQESNVIVRAFRDYLRQDIGEILI R P A V R A 1 1 1 0 0 1 1 0 1 2 1 0 0 1 2 1 0 0 0 2 0 0 15 0 1 3 1718.9468 P21513 P21513 202 216 rne Ribonuclease E yes yes 3 0.0014907 44.132 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36610000 9388300 8242500 0 0 6884300 12095000 0 0 3500 297 3860 20942;20943;20944;20945 15838;15839;15840 15839 3 9388300 8437100 0 0 8304500 13399000 0 0 PASASPAVGYMSVHQK REVIPFGASLRYAGRPASASPAVGYMSVHQ ASASPAVGYMSVHQKQQQDLVNDALNVE__ R P A Q K Q 3 0 0 0 0 1 0 1 1 0 0 1 1 0 2 3 0 0 1 2 0 0 16 0 0 5 1628.7981 P0AFG3 P0AFG3 905 920 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 5.1204E-29 127.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75034000 15176000 18280000 0 0 18522000 23057000 0 0 3501 246 3861 20946;20947;20948;20949 15841;15842;15843;15844 15844 4 15176000 18711000 0 0 22343000 25542000 0 0 PASVLHNMVR FGRRTPDDSFLEWHKPASVLHNMVRAVADP LEWHKPASVLHNMVRAVADPWPGAFSYVGN K P A V R A 1 1 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 2 0 0 10 0 0 2 1122.5968 P77398 P77398 213 222 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 4.9304E-29 150.35 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 579920000 150630000 146810000 0 0 123360000 159110000 0 0 3502 432 3862;3863 20950;20951;20952;20953;20954;20955;20956;20957;20958;20959;20960;20961 15845;15846;15847;15848;15849;15850;15851;15852;15853;15854;15855;15856 15855 330 12 150630000 150270000 0 0 148810000 176260000 0 0 PAVLEVITPTQVR FAKGVQLHNEKDLTKPAVLEVITPTQVRLT TKPAVLEVITPTQVRLTISEGRYHQVKRMF K P A V R L 1 1 0 0 0 1 1 0 0 1 1 0 0 0 2 0 2 0 0 3 0 0 13 0 1 3 1421.8242 P0AA43 P0AA43 163 175 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 2.9851E-18 98.943 By MS/MS By MS/MS By MS/MS 1 1 1 16611000 0 8609400 0 0 0 8002000 0 0 3503 183 3864 20962;20963;20964 15857;15858;15859 15858 1 0 8812600 0 0 0 8864400 0 0 PAVVESVAR VEQKATCVFAEPQFRPAVVESVARGTSVRM AEPQFRPAVVESVARGTSVRMGTLDPLGTN R P A A R G 2 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 3 0 0 9 0 1 3 926.51853 P39172 P39172 261 269 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 1.1817E-60 178.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 137340000 34936000 37224000 0 0 34761000 30420000 0 0 3504 361 3865 20965;20966;20967;20968;20969;20970 15860;15861;15862;15863 15862 4 34936000 38102000 0 0 42898000 34417000 0 0 PDMKLFAGNATPE ______________________________ ______________________________ M P D P E L 2 0 1 1 0 0 1 1 0 0 1 1 1 1 2 0 1 0 0 0 0 0 13 1 0 4 1389.6599 P0A717 P0A717 2 14 prs Ribose-phosphate pyrophosphokinase yes yes 2 5.8629E-19 129.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 385090000 61031000 31230000 42449000 56572000 30358000 35025000 62038000 66389000 3505 91 3866;3867 20971;20972;20973;20974;20975;20976;20977;20978;20979;20980;20981;20982;20983;20984;20985;20986 15864;15865;15866;15867;15868;15869;15870;15871;15872;15873;15874;15875;15876 15874 100 13 937720000 476260000 360680000 428910000 467380000 530850000 477460000 381000000 PEAGHFAK IQVTTGAKKANRVTKPEAGHFAKAGVEAGR KANRVTKPEAGHFAKAGVEAGRGLWEFRLA K P E A K A 2 0 0 0 0 0 1 1 1 0 0 1 0 1 1 0 0 0 0 0 0 0 8 0 1 3 855.4239 P60438 P60438 63 70 rplC 50S ribosomal protein L3 yes yes 2 0.0030129 71.296 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25345000 8059900 8028700 0 0 4906500 4349700 0 0 3506 380 3868 20987;20988;20989;20990 15877;15878 15878 2 8059900 8218200 0 0 5918700 4818500 0 0 PEEPSGVE PPPPQAPPEEENESEPEEPSGVEGAAFQSR EEENESEPEEPSGVEGAAFQSRLPHDRMTS E P E V E G 0 0 0 0 0 0 3 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 8 0 2 2 842.36578 LSD1-FL-His LSD1-FL-His 170 177 yes yes 1 0.0049004 38.133 By matching By matching By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 1 1 30572000 5353200 4336000 3433100 3149000 3239500 3031900 2005800 6023600 3507 24 3869 20991;20992;20993;20994;20995;20996;20997;20998 15879 15879 1 82251000 66125000 29171000 23874000 49876000 45953000 15437000 34568000 PFAPLLEK RHVVKVVNPELHKGKPFAPLLEKNSKSGGR PELHKGKPFAPLLEKNSKSGGRNNNGRITT K P F E K N 1 0 0 0 0 0 1 0 0 0 2 1 0 1 2 0 0 0 0 0 0 0 8 0 1 3 913.5273 P60422 P60422 29 36 rplB 50S ribosomal protein L2 yes yes 2 0.0027134 77.058 By MS/MS By MS/MS By MS/MS 1 1 1 14631000 4085600 0 0 0 4651500 5894200 0 0 3508 379 3870 20999;21000;21001 15880;15881;15882 15881 3 4085600 0 0 0 5611100 6529500 0 0 PFNWMGPR WAYGEKEGLQFTLFRPFNWMGPRLDNLNAA LQFTLFRPFNWMGPRLDNLNAARIGSSRAI R P F P R L 0 1 1 0 0 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 0 0 8 0 0 2 1003.4698 P77398 P77398 490 497 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 5.2858E-12 132.72 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 966290000 277420000 208010000 0 0 240400000 240450000 0 0 3509 432 3871;3872 21002;21003;21004;21005;21006;21007;21008;21009;21010;21011;21012;21013 15883;15884;15885;15886;15887;15888;15889;15890;15891;15892 15891 331 10 277420000 212920000 0 0 289990000 266370000 0 0 PGIVIGKKGEDVEK ERPAKSIRVTIHTARPGIVIGKKGEDVEKL RPGIVIGKKGEDVEKLRKVVADIAGVPAQI R P G E K L 0 0 0 1 0 0 2 3 0 2 0 3 0 0 1 0 0 0 0 2 0 0 14 2 2 1 1467.8297 P0A7V3 P0A7V3 73 86 rpsC 30S ribosomal protein S3 yes yes 4 0.022143 18.829 By MS/MS 1 904240 0 0 0 0 0 904240 0 0 3510 129 3873 21014 15893 15893 0 0 0 0 0 0 1001700 0 0 PGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLK PHQHQSPLHDSSEAKPGMDSLAPEDGSHRP PTPPGAQPTAPGSLKAPDTRNEKLNSLEDV K P G L K A 5 1 0 2 0 1 2 4 1 0 2 1 1 0 8 3 2 0 0 0 0 0 33 1 2 13 3235.5568 P21179 P21179 24 56 katE Catalase HPII yes yes 4 9.4819E-05 33.544 By matching By matching By matching By MS/MS 1 1 1 1 21923000 4231400 5124800 0 0 4644500 7922000 0 0 3511 293 3874 21015;21016;21017;21018 15894 15894 1 4231400 5245700 0 0 5602700 8775800 0 0 PGPVVVDLPK PQVLKKAFWLAASGRPGPVVVDLPKDILNP AASGRPGPVVVDLPKDILNPANKLPYVWPE R P G P K D 0 0 0 1 0 0 0 1 0 0 1 1 0 0 3 0 0 0 0 3 0 0 10 0 0 3 1019.6015 P00893 P00893 154 163 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 4.9974E-07 110.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 81125000 17496000 21041000 0 0 19480000 23107000 0 0 3512 29 3875 21019;21020;21021;21022 15895;15896;15897;15898 15896 4 17496000 21538000 0 0 23499000 25598000 0 0 PGSLGHR TREHIPVLVYGPKVKPGSLGHRETFADIGQ LVYGPKVKPGSLGHRETFADIGQTLAKYFG K P G H R E 0 1 0 0 0 0 0 2 1 0 1 0 0 0 1 1 0 0 0 0 0 0 7 0 0 1 722.38237 P0A6K6 P0A6K6 375 381 deoB Phosphopentomutase yes yes 2 8.0518E-34 153.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29514000 8375800 12401000 0 0 5693600 3043900 0 0 3513 75 3876 21023;21024;21025;21026 15899;15900;15901 15900 2 8375800 12694000 0 0 6868300 3371900 0 0 PGTPAADMVDDVPEEEKK DVNFDMSYSFIFSARPGTPAADMVDDVPEE PAADMVDDVPEEEKKQRLYILQERINQQAM R P G K K Q 2 0 0 3 0 0 3 1 0 0 0 2 1 0 3 0 1 0 0 2 0 0 18 1 3 5 1926.8881 P0AEI1 P0AEI1 342 359 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 3 0.0014893 36.637 By MS/MS By MS/MS By matching By matching 1 1 1 1 24525000 5423000 6956600 0 0 5736400 6408600 0 0 3514 237 3877 21027;21028;21029;21030 15902 15902 1 5423000 7120800 0 0 6919900 7099300 0 0 PHSLFSTDTDLTAE ______________________________ MPHSLFSTDTDLTAENLLRLPAEFGCPVWV M P H A E N 1 0 0 2 0 0 1 0 1 0 2 0 0 1 1 2 3 0 0 0 0 0 14 0 0 2 1532.6995 P00861 P00861 2 15 lysA Diaminopimelate decarboxylase yes yes 2 1.1905E-06 76.465 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 38971000 6180500 5887900 4669400 5035300 5062000 0 3835300 8301200 3515 28 3878 21031;21032;21033;21034;21035;21036;21037 15903;15904;15905;15906 15905 3 94961000 89792000 39675000 38175000 77934000 0 29517000 47639000 PHSLFSTDTDLTAENLLR ______________________________ LFSTDTDLTAENLLRLPAEFGCPVWVYDAQ M P H L R L 1 1 1 2 0 0 1 0 1 0 4 0 0 1 1 2 3 0 0 0 0 0 18 0 1 2 2029.0116 P00861 P00861 2 19 lysA Diaminopimelate decarboxylase yes yes 3 4.132E-31 123.42 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49138000 13256000 8673100 0 0 12055000 15155000 0 0 3516 28 3879 21038;21039;21040;21041 15907;15908;15909;15910;15911 15910 5 13256000 8877800 0 0 14542000 16788000 0 0 PHSYDYDAIVIGSGPGGEGAAMGLVK ______________________________ GSGPGGEGAAMGLVKQGARVAVIERYQNVG M P H V K Q 3 0 0 2 0 0 1 6 1 2 1 1 1 0 2 2 0 0 2 2 0 0 26 0 1 5 2560.2268 P27306 P27306 2 27 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 1.1033E-84 161.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 107500000 28326000 24293000 0 0 26701000 28181000 0 0 3517 323 3880 21042;21043;21044;21045;21046 15912;15913;15914;15915;15916 15912 5 28326000 24866000 0 0 32210000 31218000 0 0 PILDIALQYR RRLSKSAVALRLTARPILDIALQYRFDSQQ RLTARPILDIALQYRFDSQQTFTRAFKKQF R P I Y R F 1 1 0 1 0 1 0 0 0 2 2 0 0 0 1 0 0 0 1 0 0 0 10 0 0 2 1200.6867 P0ACI0 P0ACI0 72 81 rob Right origin-binding protein yes yes 2 5.5558E-05 117.04 By matching By matching By matching By MS/MS 1 1 1 1 17870000 4411800 2701200 0 0 4699700 6057400 0 0 3518 211 3881 21047;21048;21049;21050 15917 15917 1 4411800 2764900 0 0 5669300 6710200 0 0 PIQLPFIPHEDPR TVINFDNAIIAAGSRPIQLPFIPHEDPRIW SRPIQLPFIPHEDPRIWDSTDALELKEVPE R P I P R I 0 1 0 1 0 1 1 0 1 2 1 0 0 1 4 0 0 0 0 0 0 0 13 0 1 4 1557.8304 P0A9P0 P0A9P0 149 161 lpdA Dihydrolipoyl dehydrogenase yes yes 3 0.0008413 49.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50829000 10367000 12067000 0 0 12864000 15532000 0 0 3519 172 3882 21051;21052;21053;21054 15918;15919;15920;15921 15921 4 10367000 12351000 0 0 15518000 17206000 0 0 PIQVLPPQLANQIAAGE ______________________________ QVLPPQLANQIAAGEVVERPASVVKELVEN M P I G E V 3 0 1 0 0 3 1 1 0 2 2 0 0 0 3 0 0 0 0 1 0 0 17 0 0 6 1757.9676 P23367 P23367 2 18 mutL DNA mismatch repair protein MutL yes yes 2 0.015627 29.807 By MS/MS By MS/MS 1 1 15571000 0 0 0 0 8257200 7314200 0 0 3520 302 3883 21055;21056 15922 15922 1 0 0 0 0 127130000 110860000 0 0 PIQVLPPQLANQIAAGEVVERPASVVK ______________________________ IAAGEVVERPASVVKELVENSLDAGATRID M P I V K E 4 1 1 0 0 3 2 1 0 2 2 1 0 0 4 1 0 0 0 5 0 0 27 1 2 8 2822.6018 P23367 P23367 2 28 mutL DNA mismatch repair protein MutL yes yes 3 1.6586E-58 131.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 187060000 30356000 48799000 0 0 31788000 76120000 0 0 3521 302 3884 21057;21058;21059;21060 15923;15924;15925;15926 15926 4 30356000 49951000 0 0 38346000 84324000 0 0 PLHNLTRFPRLE ______________________________ ______________________________ M P L L E F 0 2 1 0 0 0 1 0 1 0 3 0 0 1 2 0 1 0 0 0 0 0 12 2 0 2 1491.831 P76316 P76316 2 13 dcyD D-cysteine desulfhydrase yes yes 4 0.005668 31.228 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 35794000 2911400 2432100 5382100 10309000 0 1828600 5747500 7183300 3522 422 3885 21061;21062;21063;21064;21065;21066;21067 15927;15928 15928 2 44733000 37089000 45731000 78158000 0 27715000 44234000 41224000 PLLDSFTVDHTR ______________________________ ______________________________ M P L T R M 0 1 0 2 0 0 0 0 1 0 2 0 0 1 1 1 2 0 0 1 0 0 12 0 0 1 1399.7096 P45578 P45578 2 13 luxS S-ribosylhomocysteine lyase yes yes 3 1.7008E-07 95.417 By MS/MS By matching By MS/MS By matching 1 1 1 1 94684000 24134000 22706000 0 0 26466000 21378000 0 0 3523 370 3886 21068;21069;21070;21071 15929;15930 15930 1 24134000 23242000 0 0 31926000 23682000 0 0 PLVINSSSTIR AITLVPMFPHTLSARPLVINSSSTIRLRFS LSARPLVINSSSTIRLRFSHRRNDLEISCD R P L I R L 0 1 1 0 0 0 0 0 0 2 1 0 0 0 1 3 1 0 0 1 0 0 11 0 0 1 1185.6717 P0A7B3 P0A7B3 220 230 nadK NAD kinase yes yes 2 1.5598E-12 125.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 158490000 36438000 37489000 0 0 33050000 51509000 0 0 3524 99 3887 21072;21073;21074;21075 15931;15932;15933;15934 15933 4 36438000 38374000 0 0 39869000 57060000 0 0 PLVLLSPQATR LAWHARHLLQHDLSKPLVLLSPQATRGGTE DLSKPLVLLSPQATRGGTEIFIWSPDRPYL K P L T R G 1 1 0 0 0 1 0 0 0 0 3 0 0 0 2 1 1 0 0 1 0 0 11 0 0 3 1193.7132 P27249 P27249 695 705 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.00027411 75.378 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23822000 6123600 6728800 0 0 4631600 6337700 0 0 3525 320 3888 21076;21077;21078;21079 15935;15936;15937;15938 15935 4 6123600 6887600 0 0 5587100 7020800 0 0 PLYAIWLQNSDK KGGLHTVVDSTTLSRPLYAIWLQNSDKNAL LSRPLYAIWLQNSDKNALIRDLLKINVLDE R P L D K N 1 0 1 1 0 1 0 0 0 1 2 1 0 0 1 1 0 1 1 0 0 0 12 0 0 2 1446.7507 P0A8R9 P0A8R9 251 262 hdfR HTH-type transcriptional regulator HdfR yes yes 2 3.9669E-184 234.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 114350000 24928000 28067000 0 1639600 28220000 31492000 0 0 3526 152 3889 21080;21081;21082;21083;21084;21085 15939;15940;15941;15942 15942 4 24928000 28730000 0 12431000 34041000 34886000 0 0 PMPIVIPSYNGAR AMQNHTIKLTPPAGKPMPIVIPSYNGARKQ GKPMPIVIPSYNGARKQANLTPLLAILLHK K P M A R K 1 1 1 0 0 0 0 1 0 2 0 0 1 0 3 1 0 0 1 1 0 0 13 0 0 4 1413.7439 P30177 P30177 80 92 ybiB Uncharacterized protein YbiB yes yes 2 0.00080695 64.297 By MS/MS By matching By matching By MS/MS 1 1 1 1 17209000 3852800 3336500 0 0 4677800 5342400 0 0 3527 332 3890 21086;21087;21088;21089 15943 15943 1 3852800 3415200 0 0 5642800 5918200 0 0 PNKAIVSKEEMVDR LHIEDQVGAKRCGHRPNKAIVSKEEMVDRI RPNKAIVSKEEMVDRIRAAVDAKTDPDFVI R P N D R I 1 1 1 1 0 0 2 0 0 1 0 2 1 0 1 1 0 0 0 2 0 0 14 2 2 2 1614.8399 P77541 P77541 127 140 prpB 2-methylisocitrate lyase yes yes 2 0.0065511 33.961 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 3528 435 3891 21090;21091;21092 15944 15944 335 34 0 0 0 0 0 0 0 0 0 PNNPDNPNNPDNPDNGDNNNSDNPDAA PDNPNNPDNPNNPDEPNNPDNPNNPDNPDN PDNGDNNNSDNPDAA_______________ E P N A A - 2 0 11 6 0 0 0 1 0 0 0 0 0 0 6 1 0 0 0 0 0 0 27 0 0 7 2831.0887 CON__P0C1U8 CON__P0C1U8 310 336 yes yes 3 3.3089E-05 36.256 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 + 3529 11 3892 21093;21094 15945;15946 15945 2 0 0 0 0 0 0 0 0 PPGSAGPQAGPTVVPGSATPME KKEPPRASPPGGLAEPPGSAGPQAGPTVVP QAGPTVVPGSATPMETGIAETPEGRRTSRR E P P M E T 3 0 0 0 0 1 1 4 0 0 0 0 1 0 6 2 2 0 0 2 0 0 22 0 0 9 2003.9622 LSD1-FL-His LSD1-FL-His 79 100 yes yes 2 0.0079369 32.275 By MS/MS 1 0 0 0 0 0 0 0 0 0 3530 24 3893 21095 15947 15947 41 1 0 0 0 0 0 0 0 0 PQFRPAVVE RTQLVEQKATCVFAEPQFRPAVVESVARGT TCVFAEPQFRPAVVESVARGTSVRMGTLDP E P Q V E S 1 1 0 0 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 2 0 0 9 1 0 3 1041.5607 P39172 P39172 257 265 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 3.2972E-07 117.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 150180000 29117000 28816000 21048000 18533000 6464600 6579100 19906000 19719000 3531 361 3894 21096;21097;21098;21099;21100;21101;21102;21103 15948;15949;15950;15951;15952 15949 5 447370000 439440000 178840000 140510000 99529000 99716000 153200000 113160000 PQHDQLHRYLFE ______________________________ ______________________________ M P Q F E N 0 1 0 1 0 2 1 0 2 0 2 0 0 1 1 0 0 0 1 0 0 0 12 1 0 1 1581.7688 P0A6Y5 P0A6Y5 2 13 hslO 33 kDa chaperonin yes yes 3;4 0.014714 42.809 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 28777000 8525400 0 0 0 6249100 7986300 6016600 0 3532 85 3895 21104;21105;21106;21107;21108;21109;21110 15953;15954 15953 2 130990000 0 0 0 96211000 121040000 46305000 0 PQTDPTLEWFLSHCHIHK ______________________________ DPTLEWFLSHCHIHKYPSKSTLIHQGEKAE K P Q H K Y 0 0 0 1 1 1 1 0 3 1 2 1 0 1 2 1 2 1 0 0 0 0 18 0 1 2 2245.0739 P0ACJ8 P0ACJ8 6 23 crp cAMP-activated global transcriptional regulator CRP yes yes 3;4 9.7899E-64 128.59 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 158060000 42785000 41232000 0 0 39934000 34104000 0 0 3533 213 3896 21111;21112;21113;21114;21115 15955;15956;15957;15958;15959 15957 5 42785000 42205000 0 0 48173000 37780000 0 0 PSAHSVKLRP ______________________________ ______________________________ M P S R P L 1 1 0 0 0 0 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 10 2 0 2 1090.6247 P0A951 P0A951 2 11 speG Spermidine N(1)-acetyltransferase yes yes 3 0.0060092 51.268 By MS/MS By matching By matching 2 1 1 7263000 5035600 1287900 0 0 0 939500 0 0 3534 160 3897 21116;21117;21118;21119 15960 15960 0 21092000 1318300 0 0 0 1040800 0 0 PSAHSVKLRPLE ______________________________ ______________________________ M P S L E R 1 1 0 0 0 0 1 0 1 0 2 1 0 0 2 2 0 0 0 1 0 0 12 2 0 3 1332.7514 P0A951 P0A951 2 13 speG Spermidine N(1)-acetyltransferase yes yes 3 0.015473 35.737 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 44021000 2650300 3664700 5760600 9930400 1795800 1680400 7253200 11286000 3535 160 3898 21120;21121;21122;21123;21124;21125;21126;21127 15961 15961 1 40721000 55887000 48947000 75288000 27648000 25469000 55822000 64767000 PSAHSVKLRPLERE ______________________________ MPSAHSVKLRPLEREDLRYVHQLDNNASVM M P S R E D 1 2 0 0 0 0 2 0 1 0 2 1 0 0 2 2 0 0 0 1 0 0 14 3 1 3 1617.8951 P0A951 P0A951 2 15 speG Spermidine N(1)-acetyltransferase yes yes 3;4 9.6173E-18 110.51 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 2114700000 227160000 248360000 317590000 299210000 129300000 96466000 319460000 477110000 3536 160 3899 21128;21129;21130;21131;21132;21133;21134;21135;21136;21137;21138;21139;21140;21141;21142;21143 15962;15963;15964;15965;15966;15967;15968;15969;15970;15971 15968 9 3490300000 3787500000 2698500000 2268500000 1990700000 1462100000 2458700000 2738100000 PSDLIPELQGR DHILFIASGAFQIAKPSDLIPELQGRLPIR QIAKPSDLIPELQGRLPIRVELQALTTSDF K P S G R L 0 1 0 1 0 1 1 1 0 1 2 0 0 0 2 1 0 0 0 0 0 0 11 0 1 2 1223.651 P0A6H5 P0A6H5 315 325 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.00024645 54.608 By MS/MS 1 0 0 0 0 0 0 0 0 0 3537 71 3900 21144 15972 15972 1 0 0 0 0 0 0 0 0 PSDLNRPGHVFPLR DRITTVRAAIADGAKPSDLNRPGHVFPLRA KPSDLNRPGHVFPLRAQAGGVLTRGGHTEA K P S L R A 0 2 1 1 0 0 0 1 1 0 2 0 0 1 3 1 0 0 0 1 0 0 14 1 0 3 1603.8583 P0A7J0 P0A7J0 128 141 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 3;4 6.3293E-15 115.8 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 744270000 185260000 146860000 0 0 174440000 237700000 0 0 3538 105 3901 21145;21146;21147;21148;21149;21150;21151;21152 15973;15974;15975;15976;15977;15978;15979;15980 15975 8 185260000 150330000 0 0 210430000 263320000 0 0 PTDVMIAK RLVPHTFSRNGVPVKPTDVMIAKLAGYLSA RNGVPVKPTDVMIAKLAGYLSAESYSEYLK K P T A K L 1 0 0 1 0 0 0 0 0 1 0 1 1 0 1 0 1 0 0 1 0 0 8 0 0 2 873.46299 P52126 P52126 565 572 yfjK Uncharacterized protein YfjK yes yes 2 0.0018911 46.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 0 0 0 0 0 0 0 0 0 3539 376 3902 21153;21154;21155;21156 15981;15982 15982 298 64 0 0 0 0 0 0 0 0 0 PVAHVALPVPLPR ______________________________ ______________________________ M P V P R T 2 1 0 0 0 0 0 0 1 0 2 0 0 0 4 0 0 0 0 3 0 0 13 0 0 6 1364.8292 P17888 P17888 2 14 priA Primosomal protein N yes yes 3 1.4501E-07 82.171 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 81978000 22477000 19798000 0 0 12758000 26945000 0 0 3540 290 3903 21157;21158;21159;21160 15983;15984;15985;15986 15983 4 22477000 20265000 0 0 15390000 29849000 0 0 PVAPDANEPVK ICTRRCPFCDVAHGRPVAPDANEPVKLAQT AHGRPVAPDANEPVKLAQTIADMALRYVVI R P V V K L 2 0 1 1 0 0 1 0 0 0 0 1 0 0 3 0 0 0 0 2 0 0 11 0 1 5 1135.5873 P60716 P60716 108 118 lipA Lipoyl synthase yes yes 2 0.0011221 68.016 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 19659000 3921700 5845800 0 0 2577700 7313500 0 0 3541 382 3904 21161;21162;21163;21164;21165;21166 15987;15988;15989 15989 1 23674000 26068000 0 0 3109500 9605900 0 0 PVIKVRE ______________________________ ______________________________ M P V R E N 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 7 2 0 1 839.52289 P68679 P68679 2 8 rpsU 30S ribosomal protein S21 yes yes 2 0.017528 73.039 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 54241000 3907000 3951700 7317600 8926000 5536400 0 9489100 15113000 3542 402 3905 21167;21168;21169;21170;21171;21172;21173 15990;15991 15990 2 60029000 60264000 62177000 67673000 85239000 0 73030000 86730000 PVIKVRENEP ______________________________ ______________________________ M P V E P F 0 1 1 0 0 0 2 0 0 1 0 1 0 0 2 0 0 0 0 2 0 0 10 2 2 1 1179.6612 P68679 P68679 2 11 rpsU 30S ribosomal protein S21 yes yes 2;3 0.00041671 75.652 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 137940000 18616000 17436000 0 0 57316000 44568000 0 0 3543 402 3906 21174;21175;21176;21177;21178;21179;21180;21181 15992;15993;15994;15995;15996;15997;15998 15996 4 112370000 104360000 0 0 81600000 63532000 0 0 PVITLPDGSQR ______________________________ ______________________________ M P V Q R H 0 1 0 1 0 1 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 11 0 0 2 1181.6404 P0A8M3 P0A8M3 2 12 thrS Threonine--tRNA ligase yes yes 2 3.3069E-79 186.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 144920000 34901000 32498000 0 0 39879000 37643000 0 0 3544 147 3907 21182;21183;21184;21185 15999;16000;16001;16002 15999 4 34901000 33265000 0 0 48106000 41700000 0 0 PVPGYGEK LVDWFDARDPNPHVRPVPGYGEKIPVWLLG DPNPHVRPVPGYGEKIPVWLLGSSLYSAQL R P V E K I 0 0 0 0 0 0 1 2 0 0 0 1 0 0 2 0 0 0 1 1 0 0 8 0 1 2 845.42832 P0ADV5 P0ADV5 157 164 yhbW Uncharacterized protein YhbW yes yes 2 0.0027933 75.213 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 182890000 39495000 64584000 0 0 42030000 36783000 0 0 3545 226 3908 21186;21187;21188;21189 16003;16004 16004 2 39495000 66108000 0 0 50701000 40747000 0 0 PVPSALEK ALERLASVTDRVQARPVPSALEKAPAKKEA TDRVQARPVPSALEKAPAKKEAYRWKATTP R P V E K A 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 8 0 1 3 839.47527 P06710 P06710 461 468 dnaX DNA polymerase III subunit tau yes yes 2 0.0056839 60.478 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16216000 6611000 0 0 0 4853300 4752000 0 0 3546 51 3909 21190;21191;21192;21193 16005;16006 16006 2 6611000 0 0 0 5854600 5264100 0 0 PVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE QMVYKHAISTVVPSRPVSHHSNNAGGGTSS SAQNTSAQQDSEETE_______________ R P V T E - 3 0 4 1 0 3 3 4 4 0 0 0 0 0 1 8 3 0 1 1 0 0 36 0 2 4 3708.5293 P0A6X3 P0A6X3 67 102 hfq RNA-binding protein Hfq yes yes 5 0.014967 19.118 By MS/MS By MS/MS 1 1 7674300 5351700 0 0 0 2322600 0 0 0 3547 84 3910 21194;21195 16007 16007 1 5351700 0 0 0 2801800 0 0 0 PYHPTDVDFTHPR ETLTAEKFVIACGSRPYHPTDVDFTHPRIY SRPYHPTDVDFTHPRIYDSDSILSMHHEPR R P Y P R I 0 1 0 2 0 0 0 0 2 0 0 0 0 1 3 0 2 0 1 1 0 0 13 0 0 3 1580.7372 P27306 P27306 150 162 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3;4 6.7165E-28 141.13 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 235190000 66919000 59790000 0 0 57507000 50974000 0 0 3548 323 3911 21196;21197;21198;21199;21200;21201;21202 16008;16009;16010;16011;16012;16013;16014 16010 7 66919000 61201000 0 0 69371000 56468000 0 0 PYHQAYER INIHHSFLPAFIGARPYHQAYERGVKIIGA PAFIGARPYHQAYERGVKIIGATAHYVNDN R P Y E R G 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 8 0 1 2 1062.4883 P37051 P37051 201 208 purU Formyltetrahydrofolate deformylase yes yes 2;3 0.0010579 77.674 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 79658000 25458000 32342000 0 0 10229000 11629000 0 0 3549 354 3912 21203;21204;21205;21206;21207;21208;21209;21210 16015;16016;16017;16018;16019;16020;16021 16015 7 25458000 33105000 0 0 12339000 12883000 0 0 PYKGKGVRYADE IGQVAADLRAYRRPEPYKGKGVRYADEVVR RPEPYKGKGVRYADEVVRTKEAKKK_____ E P Y D E V 1 1 0 1 0 0 1 2 0 0 0 2 0 0 1 0 0 0 2 1 0 0 12 3 0 2 1381.699 P0AG55 P0AG55 156 167 rplF 50S ribosomal protein L6 yes yes 3 0.013106 29.807 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 50625000 3582900 3384700 12677000 7835000 5857100 0 6965100 10324000 3550 259 3913 21211;21212;21213;21214;21215;21216;21217 16022 16022 1 55051000 51618000 107710000 59401000 90175000 0 53605000 59245000 QAEDESDREVEGGR EDSSDYHVTTSQHARQAEDESDREVEGGRG RQAEDESDREVEGGRGRGRNAKAARPKKGN R Q A G R G 1 2 0 2 0 1 4 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 14 1 4 1 1575.6761 P0A705;P0A705-3;P0A705-2 P0A705 238 251 infB Translation initiation factor IF-2 yes no 3 9.6368E-07 65.092 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18597000 6059700 6240400 0 0 3679100 2618100 0 0 3551 90 3914 21218;21219;21220;21221 16023;16024;16025 16023 3 6059700 6387700 0 0 4438100 2900300 0 0 QAEFDHHAFR QYDTDAVYALICELKQAEFDHHAFRVGFNA ICELKQAEFDHHAFRVGFNANLRDPNMRYH K Q A F R V 2 1 0 1 0 1 1 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 10 0 1 2 1256.5687 P16691 P16691 26 35 phnO Protein PhnO yes yes 3 0.00022824 73.067 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 78739000 19288000 28178000 0 0 13513000 17760000 0 0 3552 286 3915 21222;21223;21224;21225 16026;16027;16028;16029 16026 4 19288000 28843000 0 0 16300000 19674000 0 0 QAGAEMTELSTNVK NVGSKLLAWAEEEARQAGAEMTELSTNVKR RQAGAEMTELSTNVKRHDAHRFYLREGYEQ R Q A V K R 2 0 1 0 0 1 2 1 0 0 1 1 1 0 0 1 2 0 0 1 0 0 14 0 2 2 1477.7083 P16691 P16691 107 120 phnO Protein PhnO yes yes 2 1.1225E-50 160.67 By matching By matching By MS/MS By matching 1 1 1 1 53862000 16827000 15079000 0 0 11346000 10610000 0 0 3553 286 3916 21226;21227;21228;21229 16030 16030 1 16827000 15435000 0 0 13687000 11753000 0 0 QAIDEYQAK Q A A K 2 0 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 9 0 1 2 1064.5138 REV__CON__P50446 yes yes 2 0.00085253 92.187 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 2707600000 450340000 467030000 4384000 4171900 973690000 808000000 0 0 + + 3554 443 3917 21230;21231;21232;21233;21234;21235;21236;21237;21238;21239 16031;16032;16033;16034;16035 16035 5 450340000 478050000 37250000 31630000 1174600000 895080000 0 0 QAIIQAIIK ISQELITNVHKSGPRQAIIQAIIKCCTSLE HKSGPRQAIIQAIIKCCTSLEIQVSAMGVA R Q A I K C 2 0 0 0 0 2 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 9 0 0 2 996.63317 P75990 P75990 342 350 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 2 0.0031616 45.952 By MS/MS 1 0 0 0 0 0 0 0 0 0 3555 414 3918 21240 16036 16036 1 0 0 0 0 0 0 0 0 QAIRVEGDTLPSSK HRVESLFKAFGRTLRQAIRVEGDTLPSSKG RQAIRVEGDTLPSSKGVL____________ R Q A S K G 1 1 0 1 0 1 1 1 0 1 1 1 0 0 1 2 1 0 0 1 0 0 14 1 1 2 1499.7944 P06987 P06987 339 352 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3 0.0049377 32.285 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 216650000 14979000 10510000 49168000 49862000 0 0 38034000 54100000 3556 55 3919 21241;21242;21243;21244;21245;21246 16037;16038 16037 2 14979000 10758000 417770000 378040000 0 0 292720000 310470000 QAKVVFVDESP CGNGVIGLTLLDKNPQAKVVFVDESPMAVA DKNPQAKVVFVDESPMAVASSRLNVETNMP P Q A S P M 1 0 0 1 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 3 0 0 11 1 1 1 1217.6292 P42596 P42596 252 262 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 0.0049853 73.26 By MS/MS By MS/MS By MS/MS 1 1 1 18707000 3942500 5387100 0 0 0 9377400 0 0 3557 366 3920 21247;21248;21249 16039;16040 16040 1 23799000 32242000 0 0 0 13367000 0 0 QALDAAGFK IAPSAAMDGQVQAIRQALDAAGFKDTAIMS QVQAIRQALDAAGFKDTAIMSYSTKFASSF R Q A F K D 3 0 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 9 0 0 3 919.47633 P0ACB2 P0ACB2 177 185 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.023345 42.599 By MS/MS 1 3993400 0 0 0 0 0 3993400 0 0 3558 207 3921 21250 16041 16041 1 0 0 0 0 0 4423800 0 0 QALEAMGK ALLRYHDPANWPLIRQALEAMGKKHLIGSR ANWPLIRQALEAMGKKHLIGSRRDCLVPAP R Q A G K K 2 0 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 8 0 1 2 846.42694 Q46861 Q46861 657 664 ygiQ UPF0313 protein YgiQ yes yes 2 0.0054355 41.652 By MS/MS 1 0 0 0 0 0 0 0 0 0 3559 441 3922 21251 16042 16042 1 0 0 0 0 0 0 0 0 QALQGVTFHMQPGEMAFLTGHSGAGK MIRFEHVSKAYLGGRQALQGVTFHMQPGEM PGEMAFLTGHSGAGKSTLLKLICGIERPSA R Q A G K S 3 0 0 0 0 3 1 5 2 0 2 1 2 2 1 1 2 0 0 1 0 0 26 0 1 4 2699.2948 P0A9R7 P0A9R7 16 41 ftsE Cell division ATP-binding protein FtsE yes yes 3;4 1.2677E-07 48.389 By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 32764000 4760200 10434000 0 0 13198000 4372600 0 0 3560 174 3923 21252;21253;21254;21255;21256;21257 16043;16044;16045 16044 3 4760200 10680000 0 0 15920000 4843900 0 0 QALSALPLPVNR WLTREQTSGVQQQIRQALSALPLPVNRLEE QIRQALSALPLPVNRLEEFDNCREAWRKCQ R Q A N R L 2 1 1 0 0 1 0 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 12 0 0 4 1277.7456 P15038 P15038 134 145 helD Helicase IV yes yes 2 9.845E-08 128.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50352000 12904000 11400000 0 0 12709000 13340000 0 0 3561 281 3924 21258;21259;21260;21261 16046;16047;16048;16049 16046 4 12904000 11669000 0 0 15331000 14778000 0 0 QAMDRANSYVIGDRATDIQLAE CRKPKVKLVERYLAEQAMDRANSYVIGDRA SYVIGDRATDIQLAENMGITGLRYDRETLN E Q A A E N 4 2 1 3 0 2 1 1 0 2 1 0 1 0 0 1 1 0 1 1 0 0 22 2 0 4 2436.1703 P06987 P06987 118 139 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3 1.5791E-17 83.849 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 2 1 2 156790000 8228300 12021000 38745000 22919000 18351000 18809000 7263900 30458000 3562 55 3925;3926 21262;21263;21264;21265;21266;21267;21268;21269;21270;21271;21272 16050;16051;16052;16053;16054;16055;16056;16057;16058;16059 16057 72 10 126430000 183320000 329210000 173760000 282530000 285080000 55904000 174790000 QAPQHAAYLVR SACQLHEIGLSVDFKQAPQHAAYLVRNLDL VDFKQAPQHAAYLVRNLDLPGFTPAQKKLL K Q A V R N 3 1 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 11 0 0 4 1252.6677 P25552 P25552 372 382 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2;3 2.6225E-05 76.143 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 92307000 28226000 24788000 0 0 24469000 14825000 0 0 3563 316 3927 21273;21274;21275;21276;21277;21278;21279;21280 16060;16061;16062;16063;16064;16065;16066;16067 16062 8 28226000 25373000 0 0 29517000 16423000 0 0 QARADKKVGGSLE DELLKVRGEVNKVIEQARADKKVGGSLEAA IEQARADKKVGGSLEAAVTLYAEPELSAKL E Q A L E A 2 1 0 1 0 1 1 2 0 0 1 2 0 0 0 1 0 0 0 1 0 0 13 3 0 2 1357.7314 P00956 P00956 825 837 ileS Isoleucine--tRNA ligase yes yes 3 0.021444 20.585 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8179800 819070 598950 3596500 2784000 381240 0 0 0 3564 32 3928 21281;21282;21283;21284;21285 16068 16068 1 12585000 9134000 30559000 21107000 5869600 0 0 0 QARLLAE LRRPELLENLALTEEQARLLAEFKTEHAQQ ENLALTEEQARLLAEFKTEHAQQQHKHDGM E Q A A E F 2 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 1 0 2 799.4552 P0A873 P0A873 233 239 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 0.00046961 104.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 562670000 38788000 38902000 172590000 134960000 28131000 22288000 49239000 77767000 3565 140 3929 21286;21287;21288;21289;21290;21291;21292;21293;21294;21295;21296;21297 16069;16070;16071;16072;16073 16069 5 548660000 546110000 1466500000 1023200000 385210000 288480000 378960000 446290000 QARNFLLTEALRGEGA NLEFNQFHPTALYHPQARNFLLTEALRGEG ARNFLLTEALRGEGAYLKRPDGTRFMPDFD P Q A G A Y 3 2 1 0 0 1 2 2 0 0 3 0 0 1 0 0 1 0 0 0 0 0 16 2 2 2 1744.922 P10902 P10902 252 267 nadB L-aspartate oxidase yes yes 3 0.0017427 44.294 By MS/MS By MS/MS 1 1 6646800 0 0 0 0 2305900 4340900 0 0 3566 274 3930 21298;21299 16074 16074 1 0 0 0 0 3282900 6187900 0 0 QATFEEMIAR DKVYYHHTGHIGGIKQATFEEMIARRPERV IGGIKQATFEEMIARRPERVIEIAVKGMLP K Q A A R R 2 1 0 0 0 1 2 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 10 0 2 2 1194.5703 P0AA10 P0AA10 86 95 rplM 50S ribosomal protein L13 yes yes 2 4.6261E-28 175.51 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 426380000 131210000 117500000 0 0 70074000 107600000 0 0 3567 182 3931;3932 21300;21301;21302;21303;21304;21305;21306;21307 16075;16076;16077;16078;16079;16080;16081;16082 16082 174 7 131210000 120270000 0 0 84530000 119190000 0 0 QATPGVPAQQSPSMYLEHHHHHH RIADQFLGAMYTLPRQATPGVPAQQSPSMY QQSPSMYLEHHHHHH_______________ R Q A H H - 2 0 0 0 0 3 1 1 6 0 1 0 1 0 3 2 1 0 1 1 0 0 23 0 1 5 2625.2044 LSD1-FL-His LSD1-FL-His 841 863 yes yes 3;4;5 7.3332E-175 209.66 By MS/MS By MS/MS By MS/MS By MS/MS 17 15 12 11 10186000000 2225700000 3025700000 0 0 1772500000 3161800000 0 0 3568 24 3933;3934 21308;21309;21310;21311;21312;21313;21314;21315;21316;21317;21318;21319;21320;21321;21322;21323;21324;21325;21326;21327;21328;21329;21330;21331;21332;21333;21334;21335;21336;21337;21338;21339;21340;21341;21342;21343;21344;21345;21346;21347;21348;21349;21350;21351;21352;21353;21354;21355;21356;21357;21358;21359;21360;21361;21362 16083;16084;16085;16086;16087;16088;16089;16090;16091;16092;16093;16094;16095;16096;16097;16098;16099;16100;16101;16102;16103;16104;16105;16106;16107;16108;16109;16110;16111;16112;16113;16114;16115;16116;16117;16118;16119;16120;16121;16122;16123;16124 16097 39 41 2896500000 3486200000 0 0 2559700000 3653300000 0 0 QAVTNPQNTLFAIK YTQDGETLVGQPAKRQAVTNPQNTLFAIKR RQAVTNPQNTLFAIKRLIGRRFQDEEVQRD R Q A I K R 2 0 2 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 0 1 0 0 14 0 0 3 1543.8358 P0A6Y8 P0A6Y8 57 70 dnaK Chaperone protein DnaK yes yes 2 5.9813E-23 161.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 578650000 123260000 146800000 0 0 164200000 144400000 0 0 3569 86 3935 21363;21364;21365;21366 16125;16126;16127;16128 16125 4 123260000 150260000 0 0 198080000 159960000 0 0 QAVTNPQNTLFAIKR YTQDGETLVGQPAKRQAVTNPQNTLFAIKR QAVTNPQNTLFAIKRLIGRRFQDEEVQRDV R Q A K R L 2 1 2 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 0 1 0 0 15 1 0 3 1699.937 P0A6Y8 P0A6Y8 57 71 dnaK Chaperone protein DnaK yes yes 3 0.00069167 51.004 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46482000 16213000 14412000 0 0 7158400 8697800 0 0 3570 86 3936 21367;21368;21369;21370 16129;16130 16129 2 16213000 14753000 0 0 8635200 9635200 0 0 QCQHDHSVQVKKKPR LCAACVEVEACRHPEQCQHDHSVQVKKKPR QCQHDHSVQVKKKPR_______________ E Q C P R - 0 1 0 1 1 3 0 0 2 0 0 3 0 0 1 1 0 0 0 2 0 0 15 3 0 1 1873.9693 P0AC51 P0AC51 157 171 zur Zinc uptake regulation protein yes yes 5 0.023651 3.504 By MS/MS 1 14575000 0 0 0 14575000 0 0 0 0 3571 204 3937 21371 16131 16131 1 0 0 0 110500000 0 0 0 0 QDIESNLQYDAGDK RSVNIFDKTGAEVKRQDIESNLQYDAGDKG RQDIESNLQYDAGDKGIYRHYMQKEIYEQP R Q D D K G 1 0 1 3 0 2 1 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 14 0 1 1 1594.7111 P17169 P17169 233 246 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0 347.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 402390000 91193000 67653000 0 0 118860000 124690000 0 0 3572 288 3938 21372;21373;21374;21375 16132;16133;16134;16135 16132 4 91193000 69249000 0 0 143380000 138130000 0 0 QDIESNLQYDAGDKGIYR RSVNIFDKTGAEVKRQDIESNLQYDAGDKG ESNLQYDAGDKGIYRHYMQKEIYEQPNAIK R Q D Y R H 1 1 1 3 0 2 1 2 0 2 1 1 0 0 0 1 0 0 2 0 0 0 18 1 1 1 2083.9811 P17169 P17169 233 250 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 1.7919E-106 189.3 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 386620000 107730000 82038000 0 0 71005000 125840000 0 0 3573 288 3939 21376;21377;21378;21379;21380;21381;21382 16136;16137;16138;16139;16140;16141 16140 6 111520000 83974000 0 0 85653000 139410000 0 0 QDLQALLGK AENKEKYANKMSSLKQDLQALLGKE_____ KMSSLKQDLQALLGKE______________ K Q D G K E 1 0 0 1 0 2 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 9 0 0 1 984.5604 P0A8N0 P0A8N0 141 149 matP Macrodomain Ter protein yes yes 2 0.0017113 54.611 By MS/MS 1 0 0 0 0 0 0 0 0 0 3574 149 3940 21383 16142 16142 1 0 0 0 0 0 0 0 0 QDLQALLGKE AENKEKYANKMSSLKQDLQALLGKE_____ MSSLKQDLQALLGKE_______________ K Q D K E - 1 0 0 1 0 2 1 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 1 0 1 1113.603 P0A8N0 P0A8N0 141 150 matP Macrodomain Ter protein yes yes 2 0.00044507 98.048 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 25440000 10300000 5397700 0 384800 4507600 4850100 0 0 3575 149 3941 21384;21385;21386;21387;21388 16143;16144;16145 16143 3 10300000 5525100 0 2917400 5437500 5372800 0 0 QDLTEAFQFAAEGK VLDGIEVVGSLVGTRQDLTEAFQFAAEGKV RQDLTEAFQFAAEGKVVPKVALRPLADINT R Q D G K V 3 0 0 1 0 2 2 1 0 0 1 1 0 2 0 0 1 0 0 0 0 0 14 0 2 3 1553.7362 P39451 P39451 288 301 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2 7.7603E-08 63.727 By MS/MS 1 0 0 0 0 0 0 0 0 0 3576 364 3942 21389 16146 16146 1 0 0 0 0 0 0 0 0 QDQNSPIKRYR GLEGKIGEKLAWLAEQDQNSPIKRYR____ WLAEQDQNSPIKRYR_______________ E Q D Y R - 0 2 1 1 0 2 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 11 2 0 1 1403.727 P0AAZ4 P0AAZ4 437 447 rarA Replication-associated recombination protein A yes yes 3;4 0.0015156 58.37 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 1 36649000 2058000 2712200 13827000 14460000 0 0 0 3591700 3577 189 3943 21390;21391;21392;21393;21394;21395;21396 16147;16148 16147 2 31620000 41361000 117490000 109630000 0 0 0 20612000 QDTAGSELLPQAK INLIDREGMRVLYEKQDTAGSELLPQAKDP EKQDTAGSELLPQAKDPETTAQWIERCLAG K Q D A K D 2 0 0 1 0 2 1 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 13 0 1 3 1356.6885 P30177 P30177 257 269 ybiB Uncharacterized protein YbiB yes yes 2 8.9288E-11 115.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37066000 9759500 7672200 0 0 9029400 10605000 0 0 3578 332 3944 21397;21398;21399;21400 16149;16150;16151 16149 3 9759500 7853300 0 0 10892000 11748000 0 0 QDTIVHRPQR QALFRQLMAGTRKIKQDTIVHRPQRKKISE TRKIKQDTIVHRPQRKKISEVPVKRLIQEQ K Q D Q R K 0 2 0 1 0 2 0 0 1 1 0 0 0 0 1 0 1 0 0 1 0 0 10 1 0 1 1248.6687 P0A8B2 P0A8B2 27 36 yfcN UPF0115 protein YfcN yes yes 3 0.0015183 55.567 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14235000 4333400 4768600 0 0 2518900 2614000 0 0 3579 142 3945 21401;21402;21403;21404 16152;16153;16154;16155 16154 3 4333400 4881200 0 0 3038500 2895700 0 0 QDVLGDLMSR VPMNIVAQRYGASVRQDVLGDLMSRNFIDA GASVRQDVLGDLMSRNFIDAIIKEKINPAG R Q D S R N 0 1 0 2 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 1 0 0 10 0 0 0 1132.5547 P0A850 P0A850 64 73 tig Trigger factor yes yes 2 0.00029623 90.15 By MS/MS By matching By matching By matching 1 1 1 2 13068000 5691900 2375400 0 0 1731300 3269200 0 0 3580 137 3946 21405;21406;21407;21408;21409 16156 16156 1 5691900 2431400 0 0 2088500 3800000 0 0 QDVPSFRPGDTVEVK ______________________________ QDVPSFRPGDTVEVKVWVVEGSKKRLQAFE K Q D V K V 0 1 0 2 0 1 1 1 0 0 0 1 0 1 2 1 1 0 0 3 0 0 15 1 1 2 1672.842 P0A7K6 P0A7K6 15 29 rplS 50S ribosomal protein L19 yes yes 3 2.0675E-14 108.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 94227000 23105000 23221000 0 0 21694000 26207000 0 0 3581 109 3947 21410;21411;21412;21413 16157;16158;16159;16160;16161 16161 5 23105000 23769000 0 0 26170000 29032000 0 0 QEIGQIVGCSR DAMTHPDGMQIKITRQEIGQIVGCSRETVG KITRQEIGQIVGCSRETVGRILKMLEDQNL R Q E S R E 0 1 0 0 1 2 1 2 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1 0 1245.6136 P0ACJ8 P0ACJ8 171 181 crp cAMP-activated global transcriptional regulator CRP yes yes 2 3.0591E-288 270.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 831210000 212620000 252650000 0 0 177300000 188630000 0 0 3582 213 3948 21414;21415;21416;21417 16162;16163;16164;16165 16164 4 212620000 258620000 0 0 213880000 208960000 0 0 QEYEQLIAK VAPGKDLTKTLNDMRQEYEQLIAKNRKDIE TLNDMRQEYEQLIAKNRKDIENQYETQITQ R Q E A K N 1 0 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 2 1 1120.5764 CON__P35527 CON__P35527 328 336 yes yes 2 2.0855E-61 149.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 162720000 826880 678130 0 0 75075000 86136000 0 0 + 3583 15 3949 21418;21419;21420;21421;21422 16166;16167 16167 0 4991500 4058600 0 0 91186000 95419000 0 0 QFAEEVQTENR VTAQRRDIQDPEVIKQFAEEVQTENRLRYL EVIKQFAEEVQTENRLRYLVCLTVADICAT K Q F N R L 1 1 1 0 0 2 3 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 11 0 3 1 1349.6212 P27249 P27249 576 586 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 4.9369E-38 138.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35812000 0 13900000 0 0 10559000 11353000 0 0 3584 320 3950 21423;21424;21425;21426 16168;16169;16170;16171;16172 16168 5 0 14228000 0 0 12738000 12577000 0 0 QFAKGVQLHNE YLVTLESPVADDTAEQFAKGVQLHNEKDLT DTAEQFAKGVQLHNEKDLTKPAVLEVITPT E Q F N E K 1 0 1 0 0 2 1 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 11 1 0 1 1269.6466 P0AA43 P0AA43 147 157 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 1.8051E-07 108.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 2 2 1 442590000 97109000 101410000 160050000 19974000 30644000 31705000 0 1699300 3585 183 3951 21427;21428;21429;21430;21431;21432;21433;21434;21435;21436;21437;21438;21439 16173;16174;16175;16176;16177;16178;16179 16175 7 1492100000 1546500000 1359900000 151440000 471790000 480530000 0 9752000 QFDYLVNSMR LKLSEVFKQFRLVPKQFDYLVNSMRVMMDR RLVPKQFDYLVNSMRVMMDRVRTQERLIMK K Q F M R V 0 1 1 1 0 1 0 0 0 0 1 0 1 1 0 1 0 0 1 1 0 0 10 0 0 0 1271.5969 P00579 P00579 265 274 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.00047138 84.213 By MS/MS By MS/MS By MS/MS 1 1 1 52847000 20054000 19916000 0 0 0 12877000 0 0 3586 27 3952 21440;21441;21442 16180;16181;16182 16180 3 20054000 20386000 0 0 0 14265000 0 0 QFGLTPLGHFTVNPEIQPGAQR KGYFVFHDAYGYFEKQFGLTPLGHFTVNPE GHFTVNPEIQPGAQRLHEIRTQLVEQKATC K Q F Q R L 1 1 1 0 0 3 1 3 1 1 2 0 0 2 3 0 2 0 0 1 0 0 22 0 1 4 2406.2444 P39172 P39172 216 237 znuA High-affinity zinc uptake system protein ZnuA yes yes 3 1.9324E-73 160.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 239700000 70521000 78684000 0 0 45597000 44900000 0 0 3587 361 3953 21443;21444;21445;21446 16183;16184;16185;16186 16186 4 70521000 80541000 0 0 55003000 49739000 0 0 QFGNSVVVPVFAAVAK EAKFRIPVSDTQAYRQFGNSVVVPVFAAVA FGNSVVVPVFAAVAKLLEPKIKQAVALRQQ R Q F A K L 3 0 1 0 0 1 0 1 0 0 0 1 0 2 1 1 0 0 0 5 0 0 16 0 0 4 1631.9035 P0AED9 P0AED9 433 448 dcm DNA-cytosine methyltransferase yes yes 2 6.3511E-56 158.3 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 137970000 53466000 46103000 1381800 0 16486000 20536000 0 0 3588 235 3954 21447;21448;21449;21450;21451 16187;16188;16189;16190 16189 4 53466000 47191000 11741000 0 19887000 22750000 0 0 QFSSSYLSR ______________________________ ______________________________ R Q F S R S 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 0 9 0 0 0 1073.5142 CON__P35527 CON__P35527 5 13 yes yes 2 0.0003116 65.305 By MS/MS By MS/MS 1 1 6555500 0 0 0 0 6555500 0 0 0 + 3589 15 3955 21452;21453 16191;16192 16192 1 0 0 0 0 7907900 0 0 0 QGALRDASESDVE FGRAAGLHLQESIAEQGALRDASESDVEAS AEQGALRDASESDVEASLDRLNRWNNNRNG E Q G V E A 2 1 0 2 0 1 2 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 13 1 1 2 1375.6216 P0AC41 P0AC41 426 438 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.00018943 66.621 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 56162000 3856500 4689500 17357000 19654000 2844600 2614000 5146100 0 3590 203 3956 21454;21455;21456;21457;21458;21459;21460 16193;16194;16195 16195 3 59254000 71515000 147480000 149010000 43796000 39619000 39606000 0 QGKDDYLICME VLGINIGKNKDTPVEQGKDDYLICMEKIYA TPVEQGKDDYLICMEKIYAYAGYIAINISS E Q G M E K 0 0 0 2 1 1 1 1 0 1 1 1 1 0 0 0 0 0 1 0 0 0 11 1 0 0 1370.5846 P0A7E1 P0A7E1 150 160 pyrD Dihydroorotate dehydrogenase (quinone) yes yes 2 0.0017133 49.418 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 3591 102 3957;3958 21461;21462;21463;21464;21465;21466;21467;21468;21469 16196;16197;16198;16199;16200 16196 109 74 0 0 0 0 0 0 0 0 0 QGKSLDDFLIKQ GQGRTPAVIKKAMDEQGKSLDDFLIKQ___ MDEQGKSLDDFLIKQ_______________ E Q G K Q - 0 0 0 2 0 2 0 1 0 1 2 2 0 1 0 1 0 0 0 0 0 0 12 2 0 0 1390.7456 P0ACF8 P0ACF8 126 137 hns DNA-binding protein H-NS yes yes 2;3 4.9286E-15 107.57 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 1 2 1 982500000 79079000 69299000 32546000 295320000 38768000 30025000 390810000 46661000 3592 210 3959 21470;21471;21472;21473;21474;21475;21476;21477;21478;21479;21480;21481;21482 16201;16202;16203;16204;16205;16206 16204 6 1215000000 1056800000 276530000 2239000000 596860000 455070000 3007800000 267780000 QGLNNHVHPHK SARNVQKRFAEWGIKQGLNNHVHPHKLRHS WGIKQGLNNHVHPHKLRHSFATHMLESSGD K Q G H K L 0 0 2 0 0 1 0 1 3 0 1 1 0 0 1 0 0 0 0 1 0 0 11 0 0 1 1279.6534 P0A8P6 P0A8P6 231 241 xerC Tyrosine recombinase XerC yes yes 3 0.0080932 34.755 By MS/MS By MS/MS By MS/MS 1 1 1 24399000 9888900 12194000 0 0 0 2315700 0 0 3593 150 3960 21483;21484;21485 16207 16207 1 9888900 12482000 0 0 0 2565200 0 0 QGNALGWATAGGSGFR IHASFNNTIVTITDRQGNALGWATAGGSGF GNALGWATAGGSGFRGSRKSTPFAAQVAAE R Q G F R G 3 1 1 0 0 1 0 5 0 0 1 0 0 1 0 1 1 1 0 0 0 0 16 0 0 3 1548.7433 P0A7R9 P0A7R9 38 53 rpsK 30S ribosomal protein S11 yes yes 2 1.3651E-134 205.02 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 354130000 102370000 100620000 0 0 67379000 83762000 0 0 3594 121 3961 21486;21487;21488;21489;21490;21491;21492;21493 16208;16209;16210;16211;16212;16213;16214;16215;16216 16215 9 102370000 102990000 0 0 81279000 92790000 0 0 QGVDADINGLR LDDFRIKFEMEQNLRQGVDADINGLRQVLD QNLRQGVDADINGLRQVLDNLTMEKSDLEM R Q G L R Q 1 1 1 2 0 1 0 2 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 0 1 1156.5836 CON__P35527 CON__P35527 251 261 yes yes 2 3.5292E-229 245.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 108100000 21164000 15984000 0 0 26776000 44179000 0 0 + 3595 15 3962 21494;21495;21496;21497 16217;16218;16219;16220;16221 16220 5 21164000 16361000 0 0 32300000 48941000 0 0 QGYREPTPIQQQAIPAVLE DSLGLSPDILRAVAEQGYREPTPIQQQAIP EPTPIQQQAIPAVLEGRDLMASAQTGTGKT E Q G L E G 2 1 0 0 0 4 2 1 0 2 1 0 0 0 3 0 1 0 1 1 0 0 19 1 1 5 2137.1168 P25888 P25888 19 37 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 1.243E-40 129.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 1 2 1 1 1 2 44805000 9109600 9073400 4732600 9700300 7957000 0 1192900 3039400 3596 318 3963 21498;21499;21500;21501;21502;21503;21504;21505;21506;21507;21508;21509 16222;16223;16224;16225;16226;16227 16225 6 139970000 138370000 40212000 73543000 122510000 0 9180900 17442000 QHFPMIYEK CMFLDISHKPADFIRQHFPMIYEKLLGLGI PADFIRQHFPMIYEKLLGLGIDLTQEPVPI R Q H E K L 0 0 0 0 0 1 1 0 1 1 0 1 1 1 1 0 0 0 1 0 0 0 9 0 1 1 1191.5747 P10902 P10902 323 331 nadB L-aspartate oxidase yes yes 3 0.00085354 66.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21049000 5394800 5306200 0 0 4716100 5631700 0 0 3597 274 3964 21510;21511;21512;21513 16228;16229;16230;16231 16228 3 5394800 5431400 0 0 5689000 6238600 0 0 QHGIVFIDE VNPEELKQDAIDAVEQHGIVFIDEIDKICK AIDAVEQHGIVFIDEIDKICKRGESSGPDV E Q H D E I 0 0 0 1 0 1 1 1 1 2 0 0 0 1 0 0 0 0 0 1 0 0 9 0 0 0 1056.524 P0A6H5 P0A6H5 249 257 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0002638 84.699 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 12155000 1828700 1578400 3762300 2999300 0 835010 0 1151400 3598 71 3965 21514;21515;21516;21517;21518;21519 16232;16233 16232 2 28097000 24071000 31968000 22739000 0 12656000 0 6607700 QHIPEHDVLLAGFPCQPFSLAGVSK HKEGVSDEAAAEHIRQHIPEHDVLLAGFPC AGFPCQPFSLAGVSKKNSLGRAHGFACDTQ R Q H S K K 2 0 0 1 1 2 1 2 2 1 3 1 0 2 3 2 0 0 0 2 0 0 25 0 1 5 2746.3901 P0AED9 P0AED9 163 187 dcm DNA-cytosine methyltransferase yes yes 4 1.7651E-07 46.558 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 27032000 9429500 7755100 0 0 4124300 5722800 0 0 3599 235 3966 21520;21521;21522;21523 16234;16235;16236 16234 3 9429500 7938100 0 0 4975200 6339600 0 0 QHPIFER HGAPAGDLYVQVQVKQHPIFEREGNNLYCE LYVQVQVKQHPIFEREGNNLYCEVPINFAM K Q H E R E 0 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 7 0 1 1 925.477 P08622 P08622 252 258 dnaJ Chaperone protein DnaJ yes yes 2 0.0036954 69.998 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 61627000 20199000 18371000 0 0 12663000 10395000 0 0 3600 61 3967 21524;21525;21526;21527 16237;16238;16239 16237 3 20199000 18804000 0 0 15275000 11515000 0 0 QHQSADNSQGQLYIVPTPIGNLADITQR ______________________________ IVPTPIGNLADITQRALEVLQAVDLIAAED K Q H Q R A 2 1 2 2 0 5 0 2 1 3 2 0 0 0 2 2 2 0 1 1 0 0 28 0 0 4 3063.5374 P67087 P67087 3 30 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 3 0.0023931 27.143 By matching By MS/MS By MS/MS By matching 1 1 1 1 31417000 8559200 9033500 11677000 0 2148000 0 0 0 3601 400 3968 21528;21529;21530;21531 16240 16240 1 8559200 9246700 99215000 0 3058100 0 0 0 QHVPVFVTDEMVGHK FPNMIGLTIAVHNGRQHVPVFVTDEMVGHK QHVPVFVTDEMVGHKLGEFAPTRTYRGHAA R Q H H K L 0 0 0 1 0 1 1 1 2 0 0 1 1 1 1 0 1 0 0 4 0 0 15 0 1 1 1721.8559 P0A7U3 P0A7U3 56 70 rpsS 30S ribosomal protein S19 yes yes 3 4.8595E-41 151.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 109430000 24120000 28784000 0 0 23847000 32681000 0 0 3602 126 3969 21532;21533;21534;21535 16241;16242;16243;16244 16243 4 24120000 29463000 0 0 28767000 36204000 0 0 QIALTEQGAQWLEENR EQSLITIREEEGGKKQIALTEQGAQWLEEN IALTEQGAQWLEENREQVEMIEERIKARCV K Q I N R E 2 1 1 0 0 3 3 1 0 1 2 0 0 0 0 0 1 1 0 0 0 0 16 0 3 2 1884.933 P64588 P64588 124 139 yqjI Transcriptional regulator YqjI yes yes 2 2.1936E-15 92.925 By MS/MS By MS/MS 1 1 10660000 0 0 0 0 6010500 4649100 0 0 3603 398 3970 21536;21537 16245;16246 16246 2 0 0 0 0 7250500 5150100 0 0 QIALTEQGAQWLEENREQVEMIEER EQSLITIREEEGGKKQIALTEQGAQWLEEN WLEENREQVEMIEERIKARCVGAALRQNPQ K Q I E R I 2 2 1 0 0 4 7 1 0 2 2 0 1 0 0 0 1 1 0 1 0 0 25 1 7 2 3028.456 P64588 P64588 124 148 yqjI Transcriptional regulator YqjI yes yes 3 4.7961E-51 124.14 By matching By MS/MS By MS/MS 1 1 1 26084000 2309100 0 0 0 17057000 6717600 0 0 3604 398 3971 21538;21539;21540 16247;16248 16247 2 2309100 0 0 0 20576000 7441600 0 0 QIASLGIYPAVDPLDSTSR ATTFAHLDATVVLSRQIASLGIYPAVDPLD LGIYPAVDPLDSTSRQLDPLVVGQEHYDTA R Q I S R Q 2 1 0 2 0 1 0 1 0 2 2 0 0 0 2 3 1 0 1 1 0 0 19 0 0 4 2002.0371 P0ABB4 P0ABB4 325 343 atpD ATP synthase subunit beta yes yes 2 2.8469E-06 71.241 By matching By matching By matching By MS/MS 1 1 1 1 13488000 3570900 3815700 0 0 3602400 2499200 0 0 3605 194 3972 21541;21542;21543;21544 16249 16249 1 3570900 3905800 0 0 4345600 2768600 0 0 QIDAVLK EAENEAGKTEEVCARQIDAVLKTQGAAAFE KTEEVCARQIDAVLKTQGAAAFEGAVIAYE R Q I L K T 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 0 1 785.4647 P0A858 P0A858 146 152 tpiA Triosephosphate isomerase yes yes 2 0.010253 65.672 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 1 70060000 13542000 14731000 0 6887600 13892000 13791000 7216500 0 3606 139 3973 21545;21546;21547;21548;21549;21550;21551;21552;21553;21554 16250;16251;16252;16253 16251 3 65798000 62854000 0 52219000 70171000 70591000 55540000 0 QIGMIFQDHHLLMDR DITRLKNREVPFLRRQIGMIFQDHHLLMDR QIGMIFQDHHLLMDRTVYDNVAIPLIIAGA R Q I D R T 0 1 0 2 0 2 0 1 2 2 2 0 2 1 0 0 0 0 0 0 0 0 15 0 0 0 1852.9076 P0A9R7 P0A9R7 80 94 ftsE Cell division ATP-binding protein FtsE yes yes 4 0.0010178 43.813 By MS/MS By matching 1 1 8820300 0 4700200 0 0 4120100 0 0 0 3607 174 3974 21555;21556 16254 16254 1 0 4811100 0 0 4970100 0 0 0 QIIIATGEGAK KGVFAAGDCTTVPYKQIIIATGEGAKASLS VPYKQIIIATGEGAKASLSAFDYLIRTKTA K Q I A K A 2 0 0 0 0 1 1 2 0 3 0 1 0 0 0 0 1 0 0 0 0 0 11 0 1 2 1099.6237 P35340 P35340 496 506 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 2.1792E-07 108.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 643550000 161350000 185330000 0 0 148600000 148270000 0 0 3608 348 3975 21557;21558;21559;21560 16255;16256;16257;16258 16256 4 161350000 189710000 0 0 179250000 164250000 0 0 QILDWHFANLEFANATPLSTLSLK EANPPSDVYLSSRDRQILDWHFANLEFANA LEFANATPLSTLSLKHWDQDDDFEFTGSHL R Q I L K H 3 0 2 1 0 1 1 0 1 1 5 1 0 2 1 2 2 1 0 0 0 0 24 0 1 4 2728.4225 LSD1-FL-His LSD1-FL-His 529 552 yes yes 3 1.6792E-07 50.426 By MS/MS 1 54860000 0 0 0 0 54860000 0 0 0 3609 24 3976 21561 16259 16259 1 0 0 0 0 66178000 0 0 0 QIRHIDGDFE WTGGHPSKEAQSLLEQIRHIDGDFEFETYY QSLLEQIRHIDGDFEFETYYSLSCHNCPDV E Q I F E F 0 1 0 2 0 1 1 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 10 1 0 0 1228.5836 P35340 P35340 111 120 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 2.5321E-76 198.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 377690000 68599000 76755000 65940000 73484000 22632000 22862000 22859000 24561000 3610 348 3977 21562;21563;21564;21565;21566;21567;21568;21569;21570;21571;21572;21573;21574;21575;21576;21577 16260;16261;16262;16263;16264;16265;16266;16267;16268;16269;16270;16271;16272 16260 13 1054000000 1170500000 560290000 557120000 348450000 346500000 175930000 140950000 QIRHIDGDFEFE WTGGHPSKEAQSLLEQIRHIDGDFEFETYY LLEQIRHIDGDFEFETYYSLSCHNCPDVVQ E Q I F E T 0 1 0 2 0 1 2 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 12 1 1 0 1504.6947 P35340 P35340 111 122 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 1.6346E-41 152.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 312550000 5487100 6300800 57484000 78160000 37656000 31663000 34873000 60929000 3611 348 3978 21578;21579;21580;21581;21582;21583;21584;21585;21586;21587;21588;21589;21590;21591;21592;21593 16273;16274;16275;16276;16277;16278;16279;16280;16281;16282;16283 16282 11 84308000 96088000 488430000 592570000 579740000 479900000 268390000 349660000 QIRPLSDEEK KRLESGYLYLGSPVKQIRPLSDEEKAGLRY GSPVKQIRPLSDEEKAGLRYSANNYVKWKD K Q I E K A 0 1 0 1 0 1 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 10 1 2 1 1213.6303 P0A9W9 P0A9W9 149 158 yrdA Protein YrdA yes yes 3 0.00086927 64.73 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 111660000 39505000 2466200 0 0 32887000 36801000 0 0 3612 179 3979 21594;21595;21596;21597 16284;16285;16286 16286 3 39505000 2524400 0 0 39672000 40768000 0 0 QISNLQQSISDAEQR RVIQRLRSEIDNVKKQISNLQQSISDAEQR QISNLQQSISDAEQRGENALKDAKNKLNDL K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 15 0 1 1 1715.8438 CON__P04264 CON__P04264 418 432 yes yes 2;3 0 351.81 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 483330000 55273000 56581000 0 0 183810000 187670000 0 0 + 3613 9 3980 21598;21599;21600;21601;21602;21603 16287;16288;16289;16290;16291;16292 16287 6 55273000 57916000 0 0 221730000 207890000 0 0 QITKYSGE AINQDNYPNGGFTAEQITKYSGEGDLAIVK NGGFTAEQITKYSGEGDLAIVKFSPNEQNK E Q I G E G 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 8 1 0 0 924.45526 CON__P0C1U8 CON__P0C1U8 152 159 yes yes 2 2.4921E-25 147.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 3531300000 295800000 351550000 853630000 814290000 147510000 169690000 406590000 492220000 + 3614 11 3981 21604;21605;21606;21607;21608;21609;21610;21611 16293;16294;16295;16296;16297 16296 5 4544900000 5361200000 7253100000 6173600000 2271100000 2571900000 3129200000 2824800000 QITKYSGEGDLAIVKFSPNEQNKHIGE AINQDNYPNGGFTAEQITKYSGEGDLAIVK IVKFSPNEQNKHIGEVVKPATMSNNAETQV E Q I G E V 1 0 2 1 0 2 3 3 1 3 1 3 0 1 1 2 1 0 1 1 0 0 27 3 2 2 3001.5145 CON__P0C1U8 CON__P0C1U8 152 178 yes yes 3;4;5 3.9166E-253 237.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 2 1 2 3 3 2658800000 33690000 37023000 718340000 424750000 103790000 189520000 461740000 689980000 + 3615 11 3982 21612;21613;21614;21615;21616;21617;21618;21619;21620;21621;21622;21623;21624;21625;21626;21627 16298;16299;16300;16301;16302;16303;16304;16305;16306;16307;16308;16309;16310;16311 16311 13 517630000 564610000 6103600000 3220300000 1597900000 2872400000 3553600000 3959700000 QIVLNCGEEPSVVANTVK VGIKVALRAMEAPLRQIVLNCGEEPSVVAN LNCGEEPSVVANTVKGGDGNYGYNAATEEY R Q I V K G 1 0 2 0 1 1 2 1 0 1 1 1 0 0 1 1 1 0 0 4 0 0 18 0 2 2 1955.9986 P0A6F5 P0A6F5 453 470 groL 60 kDa chaperonin yes yes 2 9.1704E-235 241.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 217080000 49306000 50358000 0 0 59463000 57952000 0 0 3616 68 3983 21628;21629;21630;21631;21632;21633;21634;21635 16312;16313;16314;16315;16316;16317;16318 16312 7 49306000 51547000 0 0 71731000 64198000 0 0 QIYEHGVPQAPLAVTGETEK QKLELVIQREGKIHRQIYEHGVPQAPLAVT GVPQAPLAVTGETEKTGTMVRFWPSLETFT R Q I E K T 2 0 0 0 0 2 3 2 1 1 1 1 0 0 2 0 2 0 1 2 0 0 20 0 3 4 2166.0957 P0AES6 P0AES6 143 162 gyrB DNA gyrase subunit B yes yes 3 2.0027E-13 88.448 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 64726000 14880000 18632000 0 0 16397000 14817000 0 0 3617 239 3984 21636;21637;21638;21639 16319;16320;16321;16322 16320 4 14880000 19072000 0 0 19780000 16414000 0 0 QKATCVFAEPQFRPAVVE PGAQRLHEIRTQLVEQKATCVFAEPQFRPA TCVFAEPQFRPAVVESVARGTSVRMGTLDP E Q K V E S 3 1 0 0 1 2 2 0 0 0 0 1 0 2 2 0 1 0 0 3 0 0 18 2 1 5 2076.0462 P39172 P39172 248 265 znuA High-affinity zinc uptake system protein ZnuA yes yes 3 0.00019191 50.831 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 90897000 7335900 8163500 22341000 26782000 8780500 5642900 5438500 6413100 3618 361 3985 21640;21641;21642;21643;21644;21645;21646;21647 16323;16324;16325;16326;16327 16324 5 112710000 124500000 189820000 203050000 135180000 85526000 41856000 36804000 QKCPLYEANGQAVPK AVVSKQVNMELAKIKQKCPLYEANGQAVPK QKCPLYEANGQAVPKEKDEMVEQEFNRLLE K Q K P K E 2 0 1 0 1 2 1 1 0 0 1 2 0 0 2 0 0 0 1 1 0 0 15 1 1 4 1701.8508 LSD1-FL-His LSD1-FL-His 360 374 yes yes 2;3 1.8037E-14 78.529 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 132780000 54448000 40852000 0 0 19399000 18079000 0 0 3619 24 3986 21648;21649;21650;21651;21652;21653;21654;21655 16328;16329;16330;16331;16332;16333 16328 6 54448000 41816000 0 0 23401000 20028000 0 0 QKHLSNALR PLPRLMRTLWRIHHRQKHLSNALRRFLDYC WRIHHRQKHLSNALRRFLDYCDPANVPR__ R Q K L R R 1 1 1 0 0 1 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 9 1 0 1 1065.6043 P0ACR4 P0ACR4 272 280 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 3 0.0019851 56.258 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45490000 18812000 21071000 0 0 2422400 3184800 0 0 3620 218 3987 21656;21657;21658;21659 16334;16335;16336 16334 3 18812000 21569000 0 0 2922100 3528000 0 0 QKITIKASSGLNEDE GILHVSAKDKNSGKEQKITIKASSGLNEDE QKITIKASSGLNEDEIQKMVRDAEANAEAD E Q K D E I 1 0 1 1 0 1 2 1 0 2 1 2 0 0 0 2 1 0 0 0 0 0 15 2 1 1 1631.8366 P0A6Y8 P0A6Y8 497 511 dnaK Chaperone protein DnaK yes yes 3 0.012793 14.969 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 86211000 0 0 21206000 29488000 5804900 0 12893000 16819000 3621 86 3988 21660;21661;21662;21663;21664 16337 16337 1 0 0 180180000 223570000 89371000 0 99227000 96521000 QLAAAPWILRE AAPTSPLARGPVTLEQLAAAPWILRERGSG VTLEQLAAAPWILRERGSGTREIVDYLLLS E Q L R E R 3 1 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 11 1 0 4 1266.7085 P0ACR4 P0ACR4 182 192 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 0.0099277 46.891 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 10814000 908410 1008600 5020400 3876700 0 0 0 0 3622 218 3989 21665;21666;21667;21668 16338 16338 1 13957000 15381000 42658000 29392000 0 0 0 0 QLDLLITTEAPK RIAQRQSLVKQLHERQLDLLITTEAPKMDE HERQLDLLITTEAPKMDEFSSQLLGYFTLA R Q L P K M 1 0 0 1 0 1 1 0 0 1 3 1 0 0 1 0 2 0 0 0 0 0 12 0 1 2 1340.7551 P0A8R9 P0A8R9 141 152 hdfR HTH-type transcriptional regulator HdfR yes yes 2 6.1525E-36 152.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42319000 10120000 8390900 0 0 12613000 11194000 0 0 3623 152 3990 21669;21670;21671;21672 16339;16340;16341;16342 16340 4 10120000 8589000 0 0 15216000 12401000 0 0 QLEESLGVPLFDR SALHVSQPALSQQIRQLEESLGVPLFDRSG IRQLEESLGVPLFDRSGRTIRLTDAGEVWR R Q L D R S 0 1 0 1 0 1 2 1 0 0 3 0 0 1 1 1 0 0 0 1 0 0 13 0 2 1 1501.7777 P27111 P27111 38 50 cynR HTH-type transcriptional regulator CynR yes yes 2 7.6752E-05 85.377 By MS/MS By MS/MS By MS/MS 1 1 1 13077000 5844900 4509700 0 0 2722300 0 0 0 3624 319 3991 21673;21674;21675 16343;16344;16345 16344 3 5844900 4616100 0 0 3283900 0 0 0 QLENQLGVNLFTR ESLYLTQSAVSFRIRQLENQLGVNLFTRHR IRQLENQLGVNLFTRHRNNIRLTAAGEKLL R Q L T R H 0 1 2 0 0 2 1 1 0 0 3 0 0 1 0 0 1 0 0 1 0 0 13 0 1 0 1530.8154 P0A8R9 P0A8R9 38 50 hdfR HTH-type transcriptional regulator HdfR yes yes 2 1.9006E-46 160.18 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43347000 11564000 9035600 0 0 10188000 12559000 0 0 3625 152 3992 21676;21677;21678;21679 16346;16347;16348;16349 16349 4 11564000 9248900 0 0 12290000 13912000 0 0 QLEQEQMK ______________________________ ______________________________ K Q L M K Q 0 0 0 0 0 3 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 8 0 2 0 1032.491 P0A7K6 P0A7K6 7 14 rplS 50S ribosomal protein L19 yes yes 2 2.3038E-17 135.84 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26411000 7994000 8169900 0 0 4521400 5725900 0 0 3626 109 3993 21680;21681;21682;21683 16350;16351;16352;16353 16351 4 7994000 8362700 0 0 5454200 6343000 0 0 QLEVFAEVLK ______________________________ HITLRQLEVFAEVLKSGSTTQASVMLALSQ R Q L L K S 1 0 0 0 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 2 0 0 10 0 2 1 1174.6598 P0ACR4 P0ACR4 7 16 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2 1.5284E-11 125.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75643000 19787000 22753000 0 0 14508000 18595000 0 0 3627 218 3994 21684;21685;21686;21687 16354;16355;16356;16357 16355 4 19787000 23290000 0 0 17501000 20599000 0 0 QLGEDPWVAIAK LKFDRERTRVSLGLKQLGEDPWVAIAKRYP GLKQLGEDPWVAIAKRYPEGTKLTGRVTNL K Q L A K R 2 0 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 1 0 1 0 0 12 0 1 3 1325.698 P0AG67 P0AG67 261 272 rpsA 30S ribosomal protein S1 yes yes 2 0.0034817 55.567 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 14536000 3944100 3791500 0 0 2775900 4024300 0 0 3628 261 3995 21688;21689;21690;21691 16358;16359 16358 2 3944100 3881000 0 0 3348600 4458000 0 0 QLIQVNPDILMR KTACEVAEISYKKFRQLIQVNPDILMRLSA KFRQLIQVNPDILMRLSAQMARRLQVTSEK R Q L M R L 0 1 1 1 0 2 0 0 0 2 2 0 1 0 1 0 0 0 0 1 0 0 12 0 0 1 1438.7966 P0ACJ8 P0ACJ8 105 116 crp cAMP-activated global transcriptional regulator CRP yes yes 2 1.882E-161 226.09 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 4693200000 1319900000 1363100000 0 0 903640000 1106600000 0 0 3629 213 3996;3997 21692;21693;21694;21695;21696;21697;21698;21699;21700;21701;21702;21703 16360;16361;16362;16363;16364;16365;16366;16367;16368;16369;16370;16371;16372;16373 16365 193 13 1319900000 1395300000 0 0 1090100000 1225800000 0 0 QLIVPLADSLKPGTYTVDWHVVSVDGHK NIKTLPAKRNEQDQKQLIVPLADSLKPGTY TYTVDWHVVSVDGHKTKGHYTFSVK_____ K Q L H K T 1 0 0 3 0 1 0 2 2 1 3 2 0 0 2 2 2 1 1 5 0 0 28 1 0 3 3073.6237 P0AA57 P0AA57 87 114 yobA Protein YobA yes yes 4;5 1.5771E-46 114.91 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 245450000 39416000 35804000 0 0 94224000 76009000 0 0 3630 184 3998 21704;21705;21706;21707;21708;21709;21710;21711 16374;16375;16376;16377;16378;16379;16380 16377 7 39416000 36649000 0 0 113660000 84201000 0 0 QLKVIRE FSVFREGDAMAKGLEQLKVIRERLKNARLD DAMAKGLEQLKVIRERLKNARLDDTSSEFN E Q L R E R 0 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 2 0 0 884.54435 P0AC41 P0AC41 486 492 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.011536 67.032 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 49763000 7198800 7057800 12681000 12803000 5469000 4553400 0 0 3631 203 3999 21712;21713;21714;21715;21716;21717;21718;21719;21720;21721 16381;16382 16381 2 71305000 67305000 107750000 97070000 46527000 37450000 0 0 QLKVSKE LLLNHTSLTTEALSEQLKVSKETIRRDLNE LTTEALSEQLKVSKETIRRDLNELQTQGKI E Q L K E T 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 7 2 0 0 830.48617 P0ACK8 P0ACK8 27 33 fucR L-fucose operon activator yes yes 2 0.018596 60.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25917000 0 0 4631800 5150500 0 0 6709400 9425100 3632 214 4000 21722;21723;21724;21725 16383 16383 1 0 0 39356000 39049000 0 0 51637000 54089000 QLKYTGNKDAAAAVGKAVAE EVLVAASTVEKAIAEQLKYTGNKDAAAAVG GNKDAAAAVGKAVAERALEKGIKDVSFDRS E Q L A E R 6 0 1 1 0 1 1 2 0 0 1 3 0 0 0 0 1 0 1 2 0 0 20 3 0 6 2004.064 P0C018 P0C018 61 80 rplR 50S ribosomal protein L18 yes yes 3;4 6.2012E-08 50.957 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 1 1 204610000 17751000 0 63775000 54865000 17932000 17737000 14020000 18535000 3633 266 4001 21726;21727;21728;21729;21730;21731;21732;21733;21734;21735;21736;21737;21738 16384;16385;16386;16387;16388;16389;16390 16386 7 272730000 0 541880000 415960000 276090000 268830000 107900000 106370000 QLLEAVEHK ______________________________ ______________________________ K Q L H K Q 1 0 0 0 0 1 2 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 9 0 2 1 1065.5819 P04993 P04993 6 14 recD RecBCD enzyme subunit RecD yes yes 2 0.001986 60.59 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 3634 46 4002 21739;21740 16391;16392 16391 2 0 0 0 0 0 0 0 0 QLLEQTLPAIK DIAITLHHKLCHAARQLLEQTLPAIKHGNI HAARQLLEQTLPAIKHGNILEIAQRENEAT R Q L I K H 1 0 0 0 0 2 1 0 0 1 3 1 0 0 1 0 1 0 0 0 0 0 11 0 1 2 1252.7391 P77398 P77398 171 181 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 6.5907E-133 211.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4078900000 1201100000 1055600000 0 0 820520000 1001600000 0 0 3635 432 4003 21741;21742;21743;21744 16393;16394;16395;16396;16397 16395 5 1201100000 1080500000 0 0 989800000 1109500000 0 0 QLLQELQESFGGPTGEHNSPR RVVVETPVGLNERQKQLLQELQESFGGPTG QESFGGPTGEHNSPRSKSFFDGVKKFFDDL K Q L P R S 0 1 1 0 0 3 3 3 1 0 3 0 0 1 2 2 1 0 0 0 0 0 21 0 3 2 2323.1193 P08622 P08622 339 359 dnaJ Chaperone protein DnaJ yes yes 3 2.3963E-133 193.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 185720000 56072000 57106000 0 0 36900000 35639000 0 0 3636 61 4004 21745;21746;21747;21748 16398;16399;16400;16401;16402 16400 5 56072000 58454000 0 0 44512000 39480000 0 0 QLLSGLR TSGIAAYEALSVPFRQLLSGLRAEHDFRKS EALSVPFRQLLSGLRAEHDFRKSFPEYKYR R Q L L R A 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 0 0 785.47594 P37610 P37610 144 150 tauD Alpha-ketoglutarate-dependent taurine dioxygenase yes yes 2 0.001075 103.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 96970000 36661000 25526000 0 0 13611000 21172000 0 0 3637 357 4005 21749;21750;21751;21752 16403;16404 16404 2 36661000 26128000 0 0 16419000 23454000 0 0 QLNHPNIIK AKARQDCVKEIGLLKQLNHPNIIKYLDSFI EIGLLKQLNHPNIIKYLDSFIEDNELNIVL K Q L I K Y 0 0 2 0 0 1 0 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 9 0 0 1 1075.6138 GST-Nek6 GST-Nek6 330 338 yes yes 2;3 6.7203E-37 174.69 By MS/MS By MS/MS 2 2 583890000 0 0 0 0 291190000 292700000 0 0 3638 23 4006 21753;21754;21755;21756 16405;16406;16407 16405 2 0 0 0 0 351270000 324240000 0 0 QLQQIRAE VQLSQIQAQISALEEQLQQIRAETECQNTE QISALEEQLQQIRAETECQNTEYQQLLDIK E Q L A E T 1 1 0 0 0 3 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 8 1 0 1 984.53524 CON__P13645;CON__P02535-1 CON__P13645 417 424 yes no 2 0.0058894 89.296 By MS/MS By MS/MS By MS/MS 1 1 1 46145000 5206000 3334400 0 37605000 0 0 0 0 + 3639 12 4007 21757;21758;21759 16408 16408 1 79988000 50850000 0 285100000 0 0 0 0 QLQSFGMDVTLLEAR VIIIGSGVSGLAAARQLQSFGMDVTLLEAR QLQSFGMDVTLLEARDRVGGRVATFRKGNY R Q L A R D 1 1 0 1 0 2 1 1 0 0 3 0 1 1 0 1 1 0 0 1 0 0 15 0 1 1 1706.8662 LSD1-FL-His LSD1-FL-His 298 312 yes yes 2;3 5.7373E-244 245.58 By MS/MS By MS/MS By MS/MS By MS/MS 7 6 7 6 4226200000 1044600000 1039400000 0 0 897700000 1244500000 0 0 3640 24 4008;4009 21760;21761;21762;21763;21764;21765;21766;21767;21768;21769;21770;21771;21772;21773;21774;21775;21776;21777;21778;21779;21780;21781;21782;21783;21784;21785 16409;16410;16411;16412;16413;16414;16415;16416;16417;16418;16419;16420;16421;16422;16423;16424;16425;16426;16427;16428;16429 16429 51 21 1059500000 1063900000 0 0 1082900000 1378600000 0 0 QLSAWEAGILTR VLGYSHRMYEKTGDRQLSAWEAGILTRRYG GDRQLSAWEAGILTRRYGLDKEMVMDFFRE R Q L T R R 2 1 0 0 0 1 1 1 0 1 2 0 0 0 0 1 1 1 0 0 0 0 12 0 1 2 1343.7197 P64574 P64574 51 62 yghW Uncharacterized protein YghW yes yes 2 4.9363E-18 101.3 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 40670000 15104000 0 0 0 11550000 14016000 0 0 3641 396 4010 21786;21787;21788;21789 16430;16431 16430 2 15104000 0 0 0 13933000 15527000 0 0 QLSLLLR NSFRITGINNPNEARQLSLLLRAGALIAPI INNPNEARQLSLLLRAGALIAPIQIVEERT R Q L L R A 0 1 0 0 0 1 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 7 0 0 0 841.53854 P0AG90 P0AG90 419 425 secD Protein translocase subunit SecD yes yes 2 0.003684 54.525 By MS/MS 1 0 0 0 0 0 0 0 0 0 3642 263 4011 21790 16432 16432 1 0 0 0 0 0 0 0 0 QLSPITLLNYQR HTDVERYLRYLSVERQLSPITLLNYQRQLE VERQLSPITLLNYQRQLEAIINFASENGLQ R Q L Q R Q 0 1 1 0 0 2 0 0 0 1 3 0 0 0 1 1 1 0 1 0 0 0 12 0 0 1 1444.8038 P0A8P6 P0A8P6 20 31 xerC Tyrosine recombinase XerC yes yes 2 1.9276E-10 116.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35024000 10501000 7544800 0 0 7862500 9116300 0 0 3643 150 4012 21791;21792;21793;21794 16433;16434;16435;16436 16435 4 10501000 7722900 0 0 9484500 10099000 0 0 QLSVAQR HLVVSRYDNRLLFDRQLSVAQRLNYSGEGN DNRLLFDRQLSVAQRLNYSGEGNEPVERMM R Q L Q R L 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 7 0 0 1 800.45045 P27249 P27249 292 298 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.0035808 70.716 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 51798000 8910200 10146000 8962900 10539000 7662500 5576600 0 0 3644 320 4013 21795;21796;21797;21798;21799;21800;21801 16437;16438;16439 16437 2 8910200 10386000 76156000 79901000 9243300 6246300 0 0 QLVSELIGMDSK DGEDANLQSQLYTAKQLVSELIGMDSKLSG TAKQLVSELIGMDSKLSGVLDMLEEATIQI K Q L S K L 0 0 0 1 0 1 1 1 0 1 2 1 1 0 0 2 0 0 0 1 0 0 12 0 1 0 1318.6803 P05824 P05824 251 262 recN DNA repair protein RecN yes yes 2 0.00015449 63.624 By MS/MS By MS/MS By MS/MS 1 1 1 15736000 7834800 4725400 0 0 3175300 0 0 0 3645 49 4014 21802;21803;21804 16440;16441 16441 0 7834800 4837000 0 0 3830400 0 0 0 QMHVWTSST PDHRPDIVYVHQVARQMHVWTSST______ VHQVARQMHVWTSST_______________ R Q M S T - 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 9 0 0 0 1075.4757 GST-Nek6 GST-Nek6 536 544 yes yes 2 0.0036105 53.554 By MS/MS By MS/MS 1 1 12179000 0 0 0 0 5422900 6756500 0 0 3646 23 4015 21805;21806 16442;16443 16442 37 2 0 0 0 0 6541700 7484700 0 0 QMLQEMGR VHMIETINKLNRISRQMLQEMGREPTPEEL KLNRISRQMLQEMGREPTPEELAERMLMPE R Q M G R E 0 1 0 0 0 2 1 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 8 0 1 0 991.45792 P00579 P00579 469 476 rpoD RNA polymerase sigma factor RpoD yes yes 2 7.3077E-05 108.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25502000 5522100 7810300 0 0 5910000 6259400 0 0 3647 27 4016 21807;21808;21809;21810 16444;16445;16446;16447;16448 16445 5 5522100 7994700 0 0 7129300 6934000 0 0 QMLQEMGREPTPEELAER VHMIETINKLNRISRQMLQEMGREPTPEEL QEMGREPTPEELAERMLMPEDKIRKVLKIA R Q M E R M 1 2 0 0 0 2 5 1 0 0 2 0 2 0 2 0 1 0 0 0 0 0 18 1 5 3 2143.0038 P00579 P00579 469 486 rpoD RNA polymerase sigma factor RpoD yes yes 3 9.2695E-64 159.19 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 157410000 65140000 43411000 0 0 20133000 28725000 0 0 3648 27 4017;4018 21811;21812;21813;21814;21815;21816;21817 16449;16450;16451;16452;16453 16450 60 5 65140000 44435000 0 0 24287000 31821000 0 0 QMLSQDKRIE HDIVHGLQALPSRIEQMLSQDKRIEALAED PSRIEQMLSQDKRIEALAEDFSDKHHALFL E Q M I E A 0 1 0 1 0 2 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 10 2 0 0 1246.634 P17169 P17169 447 456 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 9.3679E-05 102.61 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 4 2 2 3 4 2 2 251530000 37777000 55235000 22249000 23256000 30619000 52568000 14357000 15470000 3649 288 4019;4020 21818;21819;21820;21821;21822;21823;21824;21825;21826;21827;21828;21829;21830;21831;21832;21833;21834;21835;21836;21837;21838;21839 16454;16455;16456;16457;16458;16459;16460;16461;16462;16463;16464;16465;16466;16467;16468 16457 247 15 568080000 842340000 189040000 176320000 460660000 796750000 110500000 88782000 QMNDEIHQNLVGVSNHR DELLEVTDLVMLDLKQMNDEIHQNLVGVSN NDEIHQNLVGVSNHRTLEFAKYLANKNVKV K Q M H R T 0 1 3 1 0 2 1 1 2 1 1 0 1 0 0 1 0 0 0 2 0 0 17 0 1 0 1989.9439 P0A9N4 P0A9N4 133 149 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3;4 2.9841E-05 65.943 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 155790000 48757000 49517000 0 0 22881000 34637000 0 0 3650 171 4021 21840;21841;21842;21843;21844;21845;21846;21847 16469;16470;16471;16472;16473;16474;16475;16476 16470 8 48757000 50686000 0 0 27601000 38370000 0 0 QNLILRHHGGAALPSSSVNTPWHDRKATQTEE VSPQTIRRDLNELAEQNLILRHHGGAALPS VNTPWHDRKATQTEEKERIARKVAEQIPNG E Q N E E K 3 2 2 1 0 2 2 2 3 1 3 1 0 0 2 3 3 1 0 1 0 0 32 3 1 5 3549.7825 P0ACL0 P0ACL0 46 77 glpR Glycerol-3-phosphate regulon repressor yes yes 5 3.9341E-06 63.491 By MS/MS By MS/MS 1 1 32473000 0 0 12074000 20399000 0 0 0 0 3651 215 4022 21848;21849 16477;16478 16478 2 0 0 102590000 154660000 0 0 0 0 QNPQSQLKLLVTRGKE ______________________________ NPQSQLKLLVTRGKEQGYLTYAEVNDHLPE E Q N K E Q 0 1 1 0 0 3 1 1 0 0 3 2 0 0 1 1 1 0 0 1 0 0 16 3 0 1 1838.0374 P00579 P00579 3 18 rpoD RNA polymerase sigma factor RpoD yes yes 3;4 0.0065818 29.341 By MS/MS By MS/MS By MS/MS By matching 2 2 1 2 29345000 4768300 3682600 9229700 11664000 0 0 0 0 3652 27 4023 21850;21851;21852;21853;21854;21855;21856 16479;16480;16481;16482;16483 16480 5 73263000 56161000 78424000 88430000 0 0 0 0 QPDAMTHPDGMQIK DVTGRIAQTLLNLAKQPDAMTHPDGMQIKI KQPDAMTHPDGMQIKITRQEIGQIVGCSRE K Q P I K I 1 0 0 2 0 2 0 1 1 1 0 1 2 0 2 0 1 0 0 0 0 0 14 0 0 3 1567.7123 P0ACJ8 P0ACJ8 154 167 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3 2.3198E-215 240.33 By MS/MS By MS/MS By MS/MS By MS/MS 6 6 8 6 4064500000 1162800000 1406400000 0 0 748380000 746960000 0 0 3653 213 4024;4025;4026 21857;21858;21859;21860;21861;21862;21863;21864;21865;21866;21867;21868;21869;21870;21871;21872;21873;21874;21875;21876;21877;21878;21879;21880;21881;21882 16484;16485;16486;16487;16488;16489;16490;16491;16492;16493;16494;16495;16496;16497;16498;16499;16500;16501;16502;16503;16504;16505;16506 16502 194;195 23 1162800000 1439600000 0 0 914460000 827470000 0 0 QPEAILR RGTLIDLRDETLFMRQPEAILRMFYTMVHN RDETLFMRQPEAILRMFYTMVHNSAITGIY R Q P L R M 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 7 0 1 2 825.47085 P27249 P27249 372 378 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 0.010378 55.441 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15669000 4661800 4193600 0 0 3227400 3586500 0 0 3654 320 4027 21883;21884;21885;21886 16507 16507 1 4661800 4292500 0 0 3893200 3973000 0 0 QPKETVVSRWRADP CLAILKGIFGSSAVPQPKETVVSRWRADPW PQPKETVVSRWRADPWARGSYSYVAAGSSG P Q P D P W 1 2 0 1 0 1 1 0 0 0 0 1 0 0 2 1 1 1 0 2 0 0 14 3 1 2 1667.8744 LSD1-FL-His LSD1-FL-His 744 757 yes yes 3 0.0058733 50.088 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 68024000 3739500 2877500 0 0 34581000 26826000 0 0 3655 24 4028 21887;21888;21889;21890 16508;16509 16509 2 22574000 17222000 0 0 49232000 38240000 0 0 QPLELVDMVEK LEQYFGRETARMVVRQPLELVDMVEKLDLY MVVRQPLELVDMVEKLDLYITVKGGGISGQ R Q P E K L 0 0 0 1 0 1 2 0 0 0 2 1 1 0 1 0 0 0 0 2 0 0 11 0 2 1 1299.6744 P0A7X3 P0A7X3 50 60 rpsI 30S ribosomal protein S9 yes yes 2 3.0987E-17 132.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 114480000 28790000 24012000 0 0 30411000 31270000 0 0 3656 133 4029;4030 21891;21892;21893;21894;21895;21896 16510;16511;16512;16513;16514 16512 4 28790000 24579000 0 0 36685000 34641000 0 0 QQGYVSTEELVEHFSVSPQTIR MKQTQRHNGIIELVKQQGYVSTEELVEHFS EELVEHFSVSPQTIRRDLNELAEQNLILRH K Q Q I R R 0 1 0 0 0 3 3 1 1 1 1 0 0 1 1 3 2 0 1 3 0 0 22 0 3 1 2533.2449 P0ACL0 P0ACL0 16 37 glpR Glycerol-3-phosphate regulon repressor yes yes 3 1.5348E-36 113.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 87986000 20465000 18300000 0 0 25279000 23942000 0 0 3657 215 4031 21897;21898;21899;21900 16515;16516;16517;16518 16518 4 20465000 18732000 0 0 30494000 26522000 0 0 QQIEEATSDYDR VGEEAAIQGRVAQIRQQIEEATSDYDREKL QIRQQIEEATSDYDREKLQERVAKLAGGVA R Q Q D R E 1 1 0 2 0 2 2 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 12 0 2 1 1453.6321 P0A6F5 P0A6F5 351 362 groL 60 kDa chaperonin yes yes 2 2.5329E-119 207.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 243050000 49638000 48261000 0 0 73735000 71415000 0 0 3658 68 4032 21901;21902;21903;21904;21905;21906 16519;16520;16521;16522;16523 16522 5 49638000 49400000 0 0 88946000 79112000 0 0 QQIEEATSDYDREK VGEEAAIQGRVAQIRQQIEEATSDYDREKL RQQIEEATSDYDREKLQERVAKLAGGVAVI R Q Q E K L 1 1 0 2 0 2 3 0 0 1 0 1 0 0 0 1 1 0 1 0 0 0 14 1 3 1 1710.7697 P0A6F5 P0A6F5 351 364 groL 60 kDa chaperonin yes yes 2;3 7.8259E-270 254.53 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 628990000 149810000 231910000 0 0 131890000 115380000 0 0 3659 68 4033 21907;21908;21909;21910;21911;21912;21913;21914 16524;16525;16526;16527;16528;16529;16530 16526 7 149810000 237390000 0 0 159100000 127810000 0 0 QQIIGLAEVR EVKAAMSGMLSPELKQQIIGLAEVRDVFKS SPELKQQIIGLAEVRDVFKSPKFGAIAGCM K Q Q V R D 1 1 0 0 0 2 1 1 0 2 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1 1 1125.6506 P0A705;P0A705-3;P0A705-2 P0A705 792 801 infB Translation initiation factor IF-2 yes no 2 0.015164 45.161 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 15160000 3483000 3313700 0 0 3962400 4400700 0 0 3660 90 4034 21915;21916;21917;21918 16531 16531 1 3483000 3391900 0 0 4779900 4875000 0 0 QQLAALIDSYR HVQGYFRPHIDSTERQQLAALIDSYRRGEQ STERQQLAALIDSYRRGEQPLLAPLMRIKH R Q Q Y R R 2 1 0 1 0 2 0 0 0 1 2 0 0 0 0 1 0 0 1 0 0 0 11 0 0 2 1276.6776 P24252 P24252 113 123 ybgA Uncharacterized protein YbgA yes yes 2 2.0533E-07 108.67 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 76399000 23531000 21841000 0 0 12334000 18693000 0 0 3661 313 4035 21919;21920;21921;21922 16532;16533;16534 16532 3 23531000 22357000 0 0 14878000 20708000 0 0 QQLDLIATR RWSGEMSEIASGVLRQQLDLIATRTGENKW ASGVLRQQLDLIATRTGENKWLTREQTSGV R Q Q T R T 1 1 0 1 0 2 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 9 0 0 1 1056.5928 P15038 P15038 105 113 helD Helicase IV yes yes 2 0.0026469 68.016 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 40790000 10391000 10702000 0 0 9342600 10355000 0 0 3662 281 4036 21923;21924;21925;21926 16535;16536;16537 16535 3 10391000 10954000 0 0 11270000 11470000 0 0 QQNQVLQTKWE NNQFASFIDKVRFLEQQNQVLQTKWELLQQ RFLEQQNQVLQTKWELLQQVDTSTRTHNLE E Q Q W E L 0 0 1 0 0 4 1 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 11 1 0 0 1400.7048 CON__P04264;CON__P35908v2;CON__P35908;CON__Q7Z794 CON__P04264 203 213 no no 2 0.00066742 68.016 By MS/MS By MS/MS 1 1 8659500 0 0 5163700 3495800 0 0 0 0 + 3663 9;16;21 4037 21927;21928 16538 16538 1 0 0 43875000 26504000 0 0 0 0 QQPPAVQFVPPLPEWK KCDAVLCTLPLGVLKQQPPAVQFVPPLPEW QPPAVQFVPPLPEWKTSAVQRMGFGNLNKV K Q Q W K T 1 0 0 0 0 3 1 0 0 0 1 1 0 1 5 0 0 1 0 2 0 0 16 0 1 6 1859.9934 LSD1-FL-His LSD1-FL-His 634 649 yes yes 2;3 4.4359E-154 209.67 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 3 21377000000 8794000000 5829600000 0 0 2261200000 4492200000 0 0 3664 24 4038 21929;21930;21931;21932;21933;21934;21935;21936;21937;21938;21939 16539;16540;16541;16542;16543;16544;16545;16546;16547;16548;16549;16550;16551;16552 16550 14 8794000000 5967200000 0 0 2727700000 4976300000 0 0 QQQDLVNDALNVE ASASPAVGYMSVHQKQQQDLVNDALNVE__ QKQQQDLVNDALNVE_______________ K Q Q V E - 1 0 2 2 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 13 0 0 1 1484.7107 P0AFG3 P0AFG3 921 933 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 7.8435E-12 117.01 By MS/MS By MS/MS By MS/MS 1 1 1 34471000 0 12576000 0 0 10448000 11447000 0 0 3665 246 4039 21940;21941;21942 16553;16554;16555 16553 3 0 12872000 0 0 12604000 12680000 0 0 QQQVVIQNINE LSEDQMLGAVVFGHEQQQVVIQNINELVKE FGHEQQQVVIQNINELVKEAGKPRWDWQPE E Q Q N E L 0 0 2 0 0 4 1 0 0 2 0 0 0 0 0 0 0 0 0 2 0 0 11 0 0 0 1311.6783 P05055 P05055 211 221 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0019162 60.436 By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 12913000 2044900 2081700 4162400 3445100 1178600 0 0 0 3666 48 4040 21943;21944;21945;21946;21947 16556 16556 1 31420000 31747000 35367000 26119000 18145000 0 0 0 QQTVYGPLMEYIADNR IAVGELFDGMSRVKKQQTVYGPLMEYIADN QTVYGPLMEYIADNRIHAVSIKAYTPAEWA K Q Q N R I 1 1 1 1 0 2 1 1 0 1 1 0 1 0 1 0 1 0 2 1 0 0 16 0 1 2 1896.904 P0A9W6 P0A9W6 46 61 ibaG Acid stress protein IbaG yes yes 2;3 2.4534E-154 213.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 242960000 89288000 76074000 0 0 31375000 46222000 0 0 3667 178 4041 21948;21949;21950;21951;21952;21953;21954;21955 16557;16558;16559;16560;16561 16557 5 89288000 77869000 0 0 37848000 51203000 0 0 QREKPTWLE AKKQSRVKAALELAEQREKPTWLEVDAGKM ALELAEQREKPTWLEVDAGKMEGTFKRKPE E Q R L E V 0 1 0 0 0 1 2 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 9 2 1 1 1185.6142 P0A7V8 P0A7V8 164 172 rpsD 30S ribosomal protein S4 yes yes 2;3 0.01505 62.546 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 2 2 2 1 120780000 23247000 18982000 25140000 30407000 5558400 9094300 5460500 2892700 3668 130 4042 21956;21957;21958;21959;21960;21961;21962;21963;21964;21965;21966;21967;21968;21969;21970 16562;16563 16563 2 357190000 289480000 213610000 230530000 85577000 137840000 42025000 16601000 QRHDWFVER VLELINTPEMLNGVKQRHDWFVERLNTINH MLNGVKQRHDWFVERLNTINHRYGLFSEVR K Q R E R L 0 2 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 9 1 1 0 1271.616 P77581 P77581 310 318 astC Succinylornithine transaminase yes yes 3 0.0019519 56.548 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 19231000 5829600 6311300 0 0 3532500 3557900 0 0 3669 437 4043 21971;21972;21973;21974 16564;16565 16565 2 5829600 6460200 0 0 4261300 3941400 0 0 QSGFLSQMWIGDK DFCIELGNKRWQFNRQSGFLSQMWIGDKKQ NRQSGFLSQMWIGDKKQLLTPLRDQFTRAP R Q S D K K 0 0 0 1 0 2 0 2 0 1 1 1 1 1 0 2 0 1 0 0 0 0 13 0 0 0 1495.7129 B8LFD6;P00722 B8LFD6 762 774 lacZ Beta-galactosidase yes no 4 0.018958 20.381 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 21624000 6720600 7292300 0 0 3326300 4284900 0 0 3670 1 4044 21975;21976;21977;21978 16566 16566 1 6720600 7464400 0 0 4012500 4746700 0 0 QSHFRFTKAL KRHDAHRFYLREGYEQSHFRFTKAL_____ REGYEQSHFRFTKAL_______________ E Q S A L - 1 1 0 0 0 1 0 0 1 0 1 1 0 2 0 1 1 0 0 0 0 0 10 2 0 1 1233.6618 P16691 P16691 135 144 phnO Protein PhnO yes yes 3 0.021291 35.269 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 77938000 14377000 12643000 14517000 21408000 6910500 8082000 0 0 3671 286 4045 21979;21980;21981;21982;21983;21984 16567 16567 1 220900000 192810000 123350000 162310000 106390000 122500000 0 0 QSLEASLAETEGR VQALEIELQSQLALKQSLEASLAETEGRYC LKQSLEASLAETEGRYCVQLSQIQAQISAL K Q S G R Y 2 1 0 0 0 1 3 1 0 0 2 0 0 0 0 2 1 0 0 0 0 0 13 0 3 2 1389.6736 CON__P13645;CON__P02535-1 CON__P13645 387 399 yes no 2 1.1065E-263 254.19 By MS/MS By MS/MS 1 1 139780000 0 0 0 0 61886000 77898000 0 0 + 3672 12 4046 21985;21986 16568;16569;16570 16569 3 0 0 0 0 74653000 86294000 0 0 QSLGHGQHGSGSGQSPSPSR SGSSSSYGQHGSGSRQSLGHGQHGSGSGQS GQHGSGSGQSPSPSRGRHGSGSGQSSSYGP R Q S S R G 0 1 0 0 0 3 0 5 2 0 1 0 0 0 2 6 0 0 0 0 0 0 20 0 0 2 1946.8943 CON__Q86YZ3 CON__Q86YZ3 992 1011 yes no 4 0.018491 17.824 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12626000 3637200 3085300 0 0 3436900 2466100 0 0 + 3673 22 4047 21987;21988;21989;21990 16571;16572 16572 2 3637200 3158100 0 0 4146000 2731900 0 0 QSLITIREEE PSPGVIYPTLDFLQEQSLITIREEEGGKKQ DFLQEQSLITIREEEGGKKQIALTEQGAQW E Q S E E G 0 1 0 0 0 1 3 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 10 1 2 0 1216.6299 P64588 P64588 110 119 yqjI Transcriptional regulator YqjI yes yes 2 1.098E-25 144.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 2 1 1 1 376660000 25375000 23579000 100520000 90477000 21815000 18566000 43749000 52580000 3674 398 4048 21991;21992;21993;21994;21995;21996;21997;21998;21999;22000;22001;22002 16573;16574;16575;16576;16577;16578;16579 16575 5 386250000 355370000 854140000 685960000 322030000 281390000 336700000 301750000 QSVEADINGLR ADDFRLKYENEVALRQSVEADINGLRRVLD VALRQSVEADINGLRRVLDELTLTKADLEM R Q S L R R 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 11 0 1 1 1200.6099 CON__P13645;CON__P02535-1 CON__P13645 246 256 no no 2 5.1412E-65 179.37 By MS/MS By MS/MS 1 1 67228000 0 0 0 0 24994000 42234000 0 0 + 3675 12 4049 22003;22004 16580 16580 1 0 0 0 0 30150000 46786000 0 0 QSVEADINGLRR ADDFRLKYENEVALRQSVEADINGLRRVLD ALRQSVEADINGLRRVLDELTLTKADLEMQ R Q S R R V 1 2 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 12 1 1 1 1356.711 CON__P13645;CON__P02535-1 CON__P13645 246 257 no no 2;3 1.2142E-69 175.93 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 123810000 25799000 26577000 0 0 38227000 33208000 0 0 + 3676 12 4050 22005;22006;22007;22008;22009;22010;22011;22012;22013 16581;16582;16583;16584;16585;16586;16587;16588 16586 8 25799000 27204000 0 0 46113000 36787000 0 0 QTEDIPQVLK VGISRPVVKHSFLVKQTEDIPQVLKKAFWL SFLVKQTEDIPQVLKKAFWLAASGRPGPVV K Q T L K K 0 0 0 1 0 2 1 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 10 0 1 1 1169.6292 P00893 P00893 134 143 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 0.0038968 70.256 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 61087000 7704600 9204800 13092000 5915900 7620500 9374000 0 8175100 3677 29 4051 22014;22015;22016;22017;22018;22019;22020 16589;16590;16591 16590 3 7704600 9422100 111240000 44852000 9192600 10384000 0 46916000 QTEDIPQVLKK VGISRPVVKHSFLVKQTEDIPQVLKKAFWL FLVKQTEDIPQVLKKAFWLAASGRPGPVVV K Q T K K A 0 0 0 1 0 2 1 0 0 1 1 2 0 0 1 0 1 0 0 1 0 0 11 1 1 1 1297.7242 P00893 P00893 134 144 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 3 0.00010059 71.221 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34115000 8669600 12002000 0 0 6496200 6947300 0 0 3678 29 4052 22021;22022;22023;22024 16592;16593;16594 16593 3 8669600 12285000 0 0 7836400 7696100 0 0 QTGRPHGFLR LPRDSSPSRQRNRCRQTGRPHGFLRKFGLS RNRCRQTGRPHGFLRKFGLSRIKVREAAMR R Q T L R K 0 2 0 0 0 1 0 2 1 0 1 0 0 1 1 0 1 0 0 0 0 0 10 1 0 1 1167.6261 P0AG59 P0AG59 66 75 rpsN 30S ribosomal protein S14 yes yes 3 3.6112E-05 96.331 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 1 2 1 443590000 114460000 158620000 1092900 0 73935000 94337000 1150900 0 3679 260 4053 22025;22026;22027;22028;22029;22030;22031;22032 16595;16596;16597;16598 16596 4 114460000 162360000 9286300 0 89188000 104500000 8857300 0 QTIRARR WIDKHMNPELVNRMKQTIRARRKRHFNAEH PELVNRMKQTIRARRKRHFNAEHQHTRKKS K Q T R R K 1 3 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 7 2 0 1 899.54133 P0A8N0 P0A8N0 72 78 matP Macrodomain Ter protein yes yes 2 0.0031327 75.269 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21695000 10682000 7070100 0 0 0 3943400 0 0 3680 149 4054 22033;22034;22035;22036 16599;16600 16600 2 10682000 7236900 0 0 0 4368400 0 0 QTIRRDLNELA YVSTEELVEHFSVSPQTIRRDLNELAEQNL SVSPQTIRRDLNELAEQNLILRHHGGAALP P Q T L A E 1 2 1 1 0 1 1 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 11 2 1 0 1327.7208 P0ACL0 P0ACL0 34 44 glpR Glycerol-3-phosphate regulon repressor yes yes 3 0.017588 31.843 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31051000 2751100 2027700 0 0 18347000 7925300 0 0 3681 215 4055 22037;22038;22039;22040 16601;16602 16602 2 16607000 12136000 0 0 26120000 11298000 0 0 QTLAEVIEPR EVPSVGGRPPRSLQRQTLAEVIEPRYTELL RSLQRQTLAEVIEPRYTELLNLVNEEILQL R Q T P R Y 1 1 0 0 0 1 2 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 10 0 2 2 1154.6295 P0ABH0 P0ABH0 291 300 ftsA Cell division protein FtsA yes yes 2 2.4259E-28 148.94 By MS/MS By MS/MS 1 1 52322000 0 31256000 0 0 21066000 0 0 0 3682 199 4056 22041;22042 16603;16604 16603 2 0 31994000 0 0 25412000 0 0 0 QTLGLVQGSRLNSQP GQAGDGITMQGSQLAQTLGLVQGSRLNSQP QTLGLVQGSRLNSQPACTARRRTRVLILGV A Q T Q P A 0 1 1 0 0 3 0 2 0 0 3 0 0 0 1 2 1 0 0 1 0 0 15 1 0 0 1596.8584 P77398 P77398 294 308 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 4.2549E-28 128.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70962000 4551100 5142700 0 0 20580000 40688000 0 0 3683 432 4057 22043;22044;22045;22046 16605;16606;16607;16608 16608 4 27473000 30779000 0 0 29300000 58001000 0 0 QTLGLVQGSRLNSQPA GQAGDGITMQGSQLAQTLGLVQGSRLNSQP TLGLVQGSRLNSQPACTARRRTRVLILGVN A Q T P A C 1 1 1 0 0 3 0 2 0 0 3 0 0 0 1 2 1 0 0 1 0 0 16 1 0 1 1667.8955 P77398 P77398 294 309 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.011089 30.331 By matching By MS/MS 1 1 8569600 0 0 0 0 6013500 2556100 0 0 3684 432 4058 22047;22048 16609 16609 1 0 0 0 0 8561300 3643700 0 0 QTLIDHLNQK GIRKSADDSVSAQEKQTLIDHLNQKNSGPD SAQEKQTLIDHLNQKNSGPDKLTLQRKTRS K Q T Q K N 0 0 1 1 0 2 0 0 1 1 2 1 0 0 0 0 1 0 0 0 0 0 10 0 0 0 1208.6513 P0A705 P0A705 43 52 infB Translation initiation factor IF-2 yes yes 3 0.017002 28.204 By MS/MS By MS/MS By MS/MS 1 1 1 13181000 4297200 5521000 0 0 0 3363000 0 0 3685 90 4059 22049;22050;22051 16610;16611;16612 16610 3 4297200 5651300 0 0 0 3725500 0 0 QTLLNLAKQP KVGNLAFLDVTGRIAQTLLNLAKQPDAMTH TGRIAQTLLNLAKQPDAMTHPDGMQIKITR A Q T Q P D 1 0 1 0 0 2 0 0 0 0 3 1 0 0 1 0 1 0 0 0 0 0 10 1 0 1 1124.6554 P0ACJ8 P0ACJ8 146 155 crp cAMP-activated global transcriptional regulator CRP yes yes 2 1.5243E-224 251.33 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 179170000 13457000 14221000 0 0 53884000 97609000 0 0 3686 213 4060 22052;22053;22054;22055 16613 16613 1 81237000 85113000 0 0 76714000 139140000 0 0 QTLPAIKHGNILE TLHHKLCHAARQLLEQTLPAIKHGNILEIA LEQTLPAIKHGNILEIAQRENEATCFGRRT E Q T L E I 1 0 1 0 0 1 1 1 1 2 2 1 0 0 1 0 1 0 0 0 0 0 13 1 0 2 1432.8038 P77398 P77398 175 187 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.7429E-05 85.958 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 2 2 366370000 54020000 43717000 66881000 68032000 43660000 30644000 23976000 35445000 3687 432 4061 22056;22057;22058;22059;22060;22061;22062;22063;22064;22065;22066;22067;22068;22069;22070 16614;16615;16616;16617;16618 16615 5 830010000 666680000 568280000 515780000 672180000 464460000 184520000 203410000 QVEEAGDKLPADDK QTRNQGDHLLHSTRKQVEEAGDKLPADDKT KQVEEAGDKLPADDKTAIESALTALETALK K Q V D K T 2 0 0 3 0 1 2 1 0 0 1 2 0 0 1 0 0 0 0 1 0 0 14 1 2 3 1513.726 P0A6Y8 P0A6Y8 549 562 dnaK Chaperone protein DnaK yes yes 2;3 0.0030643 50.284 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 31105000 8684900 8204500 0 0 9252300 4963200 0 0 3688 86 4062 22071;22072;22073;22074;22075;22076 16619;16620;16621 16619 1 8684900 8398200 0 0 11161000 5498100 0 0 QVERLLQAP SPKLPQRLPKDLSEAQVERLLQAPLIDQPL KDLSEAQVERLLQAPLIDQPLELRDKAMLE A Q V A P L 1 1 0 0 0 2 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 9 1 1 1 1052.5978 P0A8P8 P0A8P8 117 125 xerD Tyrosine recombinase XerD yes yes 2 2.835E-05 101.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 39337000 2668100 2071600 0 0 16761000 17837000 0 0 3689 151 4063 22077;22078;22079;22080;22081 16622;16623;16624;16625 16625 4 16106000 12398000 0 0 23862000 25426000 0 0 QVESSPLNPAQAR AYTEAMLTEYADFFRQVESSPLNPAQARAV FRQVESSPLNPAQARAVVNGEHSLLVLAGA R Q V A R A 2 1 1 0 0 2 1 0 0 0 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1 4 1395.7106 P15038 P15038 191 203 helD Helicase IV yes yes 2 5.7342E-15 140.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41598000 10710000 12600000 0 0 8110200 10177000 0 0 3690 281 4064 22082;22083;22084;22085 16626;16627;16628;16629 16627 4 10710000 12897000 0 0 9783400 11274000 0 0 QVIFNPNLFPYENMEGK GGYWAERIGFLCDIRQVIFNPNLFPYENME IFNPNLFPYENMEGKIDRPEEYADIATKCV R Q V G K I 0 0 3 0 0 1 2 1 0 1 1 1 1 2 2 0 0 0 1 1 0 0 17 0 2 2 2038.9822 P0A8E1 P0A8E1 85 101 ycfP UPF0227 protein YcfP yes yes 2 1.7369E-251 251.2 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 704020000 264180000 183450000 0 0 111910000 144480000 0 0 3691 143 4065;4066 22086;22087;22088;22089;22090;22091;22092;22093;22094;22095;22096;22097 16630;16631;16632;16633;16634;16635;16636;16637;16638;16639 16639 137 10 264180000 187780000 0 0 134990000 160060000 0 0 QVLDNLTMEK QNLRQGVDADINGLRQVLDNLTMEKSDLEM INGLRQVLDNLTMEKSDLEMQYETLQEELM R Q V E K S 0 0 1 1 0 1 1 0 0 0 2 1 1 0 0 0 1 0 0 1 0 0 10 0 1 0 1189.6013 CON__P35527 CON__P35527 262 271 yes yes 2 4.1103E-76 183.43 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 323390000 48713000 25690000 0 0 125950000 123040000 0 0 + 3692 15 4067;4068 22098;22099;22100;22101;22102;22103 16640;16641;16642;16643;16644;16645 16643 25 6 48713000 26296000 0 0 151930000 136300000 0 0 QVLGTHVSQK RLNHSATHLMHAALRQVLGTHVSQKGSLVN HAALRQVLGTHVSQKGSLVNDKVLRFDFSH R Q V Q K G 0 0 0 0 0 2 0 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 10 0 0 0 1095.6037 P00957 P00957 576 585 alaS Alanine--tRNA ligase yes yes 2 0.021797 38.086 By MS/MS By MS/MS By MS/MS 1 1 1 4558200 0 2010200 0 0 1206400 1341600 0 0 3693 33 4069 22104;22105;22106 16646 16646 1 0 2057700 0 0 1455200 1486200 0 0 QVNMELAK VVTGLGGNPMAVVSKQVNMELAKIKQKCPL PMAVVSKQVNMELAKIKQKCPLYEANGQAV K Q V A K I 1 0 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 8 0 1 1 931.4797 LSD1-FL-His LSD1-FL-His 350 357 yes yes 2 5.1231E-05 110.81 By MS/MS By MS/MS By MS/MS By MS/MS 6 5 6 6 5700600000 3094200000 192770000 0 0 2279900000 133760000 0 0 3694 24 4070;4071 22107;22108;22109;22110;22111;22112;22113;22114;22115;22116;22117;22118;22119;22120;22121;22122;22123;22124;22125;22126;22127;22128;22129 16647;16648;16649;16650;16651;16652;16653;16654;16655;16656;16657;16658;16659;16660;16661;16662;16663;16664;16665;16666 16666 48 19 3097500000 197320000 0 0 2750200000 148510000 0 0 QVNMELAKIK VVTGLGGNPMAVVSKQVNMELAKIKQKCPL AVVSKQVNMELAKIKQKCPLYEANGQAVPK K Q V I K Q 1 0 1 0 0 1 1 0 0 1 1 2 1 0 0 0 0 0 0 1 0 0 10 1 1 1 1172.6587 LSD1-FL-His LSD1-FL-His 350 359 yes yes 3 0.00029027 72.243 By MS/MS By MS/MS By MS/MS 1 1 1 25173000 7687100 10439000 0 0 7047700 0 0 0 3695 24 4072 22130;22131;22132 16667;16668 16667 2 7687100 10685000 0 0 8501700 0 0 0 QVTIAQLEDVKPLLMK EAFMQKPVSKLPGAKQVTIAQLEDVKPLLM VTIAQLEDVKPLLMKSIHGDDDDHDHAEKS K Q V M K S 1 0 0 1 0 2 1 0 0 1 3 2 1 0 1 0 1 0 0 2 0 0 16 1 1 2 1825.0383 P39172 P39172 101 116 znuA High-affinity zinc uptake system protein ZnuA yes yes 2;3 1.1216E-22 148.18 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 293560000 65425000 106590000 0 0 71104000 50437000 0 0 3696 361 4073;4074 22133;22134;22135;22136;22137;22138;22139;22140;22141;22142 16669;16670;16671;16672;16673;16674;16675;16676;16677;16678 16672 294 10 65425000 109110000 0 0 85772000 55872000 0 0 QWFTDVK KFRRRKHYRKQQGHRQWFTDVKITGISA__ YRKQQGHRQWFTDVKITGISA_________ R Q W V K I 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 1 1 0 1 0 0 7 0 0 0 922.45487 P0AG48 P0AG48 91 97 rplU 50S ribosomal protein L21 yes yes 2 0.0048596 62.717 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30346000 8877300 8063200 0 0 6148600 7257200 0 0 3697 258 4075 22143;22144;22145;22146 16679;16680;16681;16682 16679 4 8877300 8253600 0 0 7417000 8039400 0 0 QYDRVEAE CSVAEYPEAITYLLEQYDRVEAEEARLSDL AITYLLEQYDRVEAEEARLSDLITGFVDPN E Q Y A E E 1 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 8 1 1 1 1008.4512 P00579 P00579 147 154 rpoD RNA polymerase sigma factor RpoD yes yes 2 2.8408E-11 129.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 202490000 17651000 21607000 60439000 62532000 7128600 7397000 12694000 13041000 3698 27 4076 22147;22148;22149;22150;22151;22152;22153;22154 16683;16684;16685;16686 16684 4 271210000 329510000 513540000 474090000 109750000 112110000 97696000 74841000 QYDRVEAEE CSVAEYPEAITYLLEQYDRVEAEEARLSDL ITYLLEQYDRVEAEEARLSDLITGFVDPNA E Q Y E E A 1 1 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 9 1 2 1 1137.4938 P00579 P00579 147 155 rpoD RNA polymerase sigma factor RpoD yes yes 2 6.486E-18 139.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 210800000 13829000 12495000 61492000 75359000 4662500 7088200 16272000 19600000 3699 27 4077 22155;22156;22157;22158;22159;22160;22161;22162 16687;16688;16689;16690 16688 4 212470000 190550000 522490000 571340000 71783000 107430000 125240000 112480000 QYGHKVMF PPKKETMERVKGILEQYGHKVMF_______ RVKGILEQYGHKVMF_______________ E Q Y M F - 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 1 0 0 8 1 0 0 1008.4851 P0A9N4 P0A9N4 239 246 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 0.022047 50.039 By MS/MS 1 6567500 0 0 0 6567500 0 0 0 0 3700 171 4078 22163 16691 16691 1 0 0 0 49792000 0 0 0 0 QYQNAEDTR PALGSVGACRQCAVKQYQNAEDTRGRLVMS RQCAVKQYQNAEDTRGRLVMSCMTPASDGT K Q Y T R G 1 1 1 1 0 2 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1 1 1123.4894 P33602 P33602 52 60 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.0045054 59.35 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19752000 7273900 7145600 0 0 2960400 2371900 0 0 3701 345 4079 22164;22165;22166;22167 16692;16693 16693 2 7273900 7314200 0 0 3571100 2627500 0 0 RADAGAIVAQLR NGETETGVTLHRMVKRADAGAIVAQLRIAI MVKRADAGAIVAQLRIAIAPDDIAITLHHK K R A L R I 4 2 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 12 1 0 4 1239.7048 P77398 P77398 138 149 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 0 290.51 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 5 4 12125000000 3578400000 3385900000 0 0 2301900000 2858800000 0 0 3702 432 4080 22168;22169;22170;22171;22172;22173;22174;22175;22176;22177;22178;22179;22180;22181;22182;22183;22184 16694;16695;16696;16697;16698;16699;16700;16701;16702 16701 8 3616000000 3489200000 0 0 2855400000 3193700000 0 0 RAEFQIIISPEYQGK KAGLVELVEINHVHRRAEFQIIISPEYQGK RAEFQIIISPEYQGKGLATRAAKLAMDYGF R R A G K G 1 1 0 0 0 2 2 1 0 3 0 1 0 1 1 1 0 0 1 0 0 0 15 1 2 2 1777.9363 P0A951 P0A951 83 97 speG Spermidine N(1)-acetyltransferase yes yes 3 0.00055642 38.889 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43198000 10205000 10056000 0 0 9395900 13542000 0 0 3703 160 4081 22185;22186;22187;22188 16703;16704;16705;16706 16706 4 10205000 10293000 0 0 11334000 15001000 0 0 RAFIEENALK DQLFTTLMGDAVEPRRAFIEENALKAANID AVEPRRAFIEENALKAANIDI_________ R R A L K A 2 1 1 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 10 1 2 2 1189.6455 P0AES6 P0AES6 789 798 gyrB DNA gyrase subunit B yes yes 2 6.7642E-11 127.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 73543000 27287000 18577000 0 0 13312000 14367000 0 0 3704 239 4082 22189;22190;22191;22192 16707;16708;16709;16710 16708 4 27287000 19015000 0 0 16059000 15916000 0 0 RAFLDAGHYQPLR RSRDPGDSAEMMQARRAFLDAGHYQPLRDA ARRAFLDAGHYQPLRDAIVAQLRERLDDKA R R A L R D 2 2 0 1 0 1 0 1 1 0 2 0 0 1 1 0 0 0 1 0 0 0 13 1 0 3 1542.8055 P36999 P36999 59 71 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 3 1.1583E-27 139.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 293170000 90417000 67081000 0 0 60270000 75404000 0 0 3705 352 4083 22193;22194;22195;22196 16711;16712;16713;16714 16714 4 90417000 68665000 0 0 72704000 83531000 0 0 RAIIENSR DGSLLEFDYHEVRTKRAIIENSRHVMLVVD YHEVRTKRAIIENSRHVMLVVDHSKFGRNA K R A S R H 1 2 1 0 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 1 1 1 957.53558 P0ACL0 P0ACL0 193 200 glpR Glycerol-3-phosphate regulon repressor yes yes 2 2.2699E-45 162.97 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49964000 18134000 21576000 0 0 5756100 4498700 0 0 3706 215 4084 22197;22198;22199;22200 16715;16716;16717;16718 16715 3 18134000 22085000 0 0 6943600 4983600 0 0 RALDNFK ARCVGAALRQNPQMKRALDNFKAVLDLRVN LRQNPQMKRALDNFKAVLDLRVNQSDISDA K R A F K A 1 1 1 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 7 1 0 1 862.4661 P64588 P64588 166 172 yqjI Transcriptional regulator YqjI yes yes 2 1.215E-11 133.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 108000000 29652000 38994000 0 0 18423000 20935000 0 0 3707 398 4085 22201;22202;22203;22204 16719;16720;16721;16722 16720 4 29652000 39915000 0 0 22224000 23191000 0 0 RALQTLVAAK RSYNPTTTGHKGQIKRALQTLVAAKKPVVY KGQIKRALQTLVAAKKPVVYVGGGAITAGC K R A A K K 3 1 0 0 0 1 0 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 10 1 0 3 1069.6608 P00893 P00893 198 207 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 0.015928 45.161 By MS/MS 1 3014500 0 3014500 0 0 0 0 0 0 3708 29 4086 22205 16723 16723 1 0 3085600 0 0 0 0 0 0 RAQSVVDYLISK DRIGSDAYNQGLSERRAQSVVDYLISKGIP SERRAQSVVDYLISKGIPADKISARGMGES R R A S K G 1 1 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 1 2 0 0 12 1 0 1 1377.7616 P0A910 P0A910 277 288 ompA Outer membrane protein A yes yes 2 8.4853E-05 72.006 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38494000 7525100 9334200 0 0 12524000 9110500 0 0 3709 158 4087 22206;22207;22208;22209 16724;16725;16726;16727 16727 4 7525100 9554500 0 0 15107000 10092000 0 0 RARKVAKSNVP ______________________________ VRKPRARKVAKSNVPALEACPQKRGVCTRV P R A V P A 2 2 1 0 0 0 0 0 0 0 0 2 0 0 1 1 0 0 0 2 0 0 11 4 0 2 1224.7415 P0A7S3 P0A7S3 12 22 rpsL 30S ribosomal protein S12 yes yes 3 0.0031732 59.426 By MS/MS By MS/MS By MS/MS 1 1 1 161070000 33766000 39476000 0 0 0 87824000 0 0 3710 122 4088 22210;22211;22212 16728 16728 1 203830000 236260000 0 0 0 125190000 0 0 RASLILTKSANHAVEE INWLNLKQNILPTRERASLILTKSANHAVE ASLILTKSANHAVEEVRLRK__________ E R A E E V 3 1 1 0 0 0 2 0 1 1 2 1 0 0 0 2 1 0 0 1 0 0 16 2 1 3 1737.9373 P0A6I3 P0A6I3 296 311 coaA Pantothenate kinase yes yes 3 0.00032512 51.695 By MS/MS By MS/MS By MS/MS 1 1 1 35002000 0 0 12270000 10655000 0 0 12077000 0 3711 72 4089 22213;22214;22215 16729;16730;16731 16731 3 0 0 104260000 80778000 0 0 92948000 0 RAVIESENSAER VIKLDQKRNNVVVSRRAVIESENSAERDQL VSRRAVIESENSAERDQLLENLQEGMEVKG R R A E R D 2 2 1 0 0 0 3 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 12 1 3 2 1359.6743 P0AG67 P0AG67 171 182 rpsA 30S ribosomal protein S1 yes yes 3 0.013473 20.857 By matching By MS/MS 1 1 4053800 2766700 0 0 0 1287100 0 0 0 3712 261 4090 22216;22217 16732 16732 1 2766700 0 0 0 1552700 0 0 0 RCDYHLNLIHPK QIALPIQEGEDVLIRRCDYHLNLIHPKDYS LIRRCDYHLNLIHPKDYSYFNTLSTKLGWS R R C P K D 0 1 1 1 1 0 0 0 2 1 2 1 0 0 1 0 0 0 1 0 0 0 12 1 0 1 1564.7933 P0A7B3 P0A7B3 262 273 nadK NAD kinase yes yes 4 0.01778 21.775 By matching By MS/MS By matching 1 1 1 22167000 6269300 8627600 0 0 7269700 0 0 0 3713 99 4091 22218;22219;22220 16733 16733 0 6269300 8831200 0 0 8769400 0 0 0 RCFTDIR VEGSPIKLIDGGKQKRCFTDIRDGIEALYR LIDGGKQKRCFTDIRDGIEALYRIIENAGN K R C I R D 0 2 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 7 1 0 0 966.47053 P77398 P77398 535 541 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 4.4339E-07 121.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 235630000 65790000 89214000 0 0 38873000 41752000 0 0 3714 432 4092 22221;22222;22223;22224 16734;16735;16736;16737;16738 16734 5 65790000 91320000 0 0 46893000 46252000 0 0 RCFTDIRDGIEALYR VEGSPIKLIDGGKQKRCFTDIRDGIEALYR RCFTDIRDGIEALYRIIENAGNRCDGEIIN K R C Y R I 1 3 0 2 1 0 1 1 0 2 1 0 0 1 0 0 1 0 1 0 0 0 15 2 1 1 1883.9312 P77398 P77398 535 549 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 4 0.00068846 46.964 By MS/MS By MS/MS By matching 1 1 1 16955000 4913900 9088500 0 0 0 2952500 0 0 3715 432 4093 22225;22226;22227 16739;16740 16739 2 4913900 9303000 0 0 0 3270800 0 0 RCLAGSEPIPE LPQAKDPETTAQWIERCLAGSEPIPESLKI QWIERCLAGSEPIPESLKIQMACCLVATGE E R C P E S 1 1 0 0 1 0 2 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 11 1 1 3 1227.5918 P30177 P30177 280 290 ybiB Uncharacterized protein YbiB yes yes 2 0.00074825 67.563 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 1 69259000 7063300 8100100 10372000 13364000 6614300 6771400 6093900 10880000 3716 332 4094 22228;22229;22230;22231;22232;22233;22234;22235 16741;16742;16743 16741 3 108530000 123530000 88127000 101320000 101830000 102630000 46900000 62437000 RDDEVIVLTGK ______________________________ AKIRRDDEVIVLTGKDKGKRGKVKNVLSSG R R D G K D 0 1 0 2 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 2 0 0 11 1 1 0 1243.6772 P60624 P60624 7 17 rplX 50S ribosomal protein L24 yes yes 2 0.0036214 60.754 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62884000 14595000 13759000 0 0 13679000 20852000 0 0 3717 381 4095 22236;22237;22238;22239 16744;16745;16746;16747 16744 3 14595000 14083000 0 0 16501000 23099000 0 0 RDDSILLAQHTR RYYPQIAPCIIVAIRRDDSILLAQHTRHRN AIRRDDSILLAQHTRHRNGVHTVLAGFVEV R R D T R H 1 2 0 2 0 1 0 0 1 1 2 0 0 0 0 1 1 0 0 0 0 0 12 1 0 1 1423.7532 P32664 P32664 137 148 nudC NADH pyrophosphatase yes yes 3 5.8573E-16 126.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 257890000 63688000 65453000 0 0 70664000 58090000 0 0 3718 340 4096 22240;22241;22242;22243 16748;16749;16750;16751 16749 4 63688000 66998000 0 0 85242000 64351000 0 0 RDEGDKWRNKKFE LLEYLEEKYEEHLYERDEGDKWRNKKFELG YERDEGDKWRNKKFELGLEFPNLPYYIDGD E R D F E L 0 2 1 2 0 0 2 1 0 0 0 3 0 1 0 0 0 1 0 0 0 0 13 5 1 0 1706.8489 GST-Nek6 GST-Nek6 35 47 yes yes 4 0.0010434 41.577 By MS/MS By MS/MS 1 1 19489000 0 0 0 0 0 0 6831700 12657000 3719 23 4097 22244;22245 16752;16753 16752 2 0 0 0 0 0 0 52579000 72636000 RDGILRVKAE VANLEAQLAEAQTRERDGILRVKAEMENLR AQTRERDGILRVKAEMENLRRRTELDIEKA E R D A E M 1 2 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 10 3 0 1 1155.6724 P09372 P09372 59 68 grpE Protein GrpE yes yes 3 0.00019863 95.401 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 365740000 31240000 30896000 50955000 60130000 26138000 20498000 65910000 79968000 3720 62 4098 22246;22247;22248;22249;22250;22251;22252;22253 16754;16755 16754 2 480000000 471170000 432950000 455880000 402420000 310680000 507260000 458920000 RDITAEFLVKSKHRDLTA ELHQQYKEASEVKPPRDITAEFLVKSKHRD TAEFLVKSKHRDLTALCKEYDELAETQGKL P R D T A L 2 2 0 2 0 0 1 0 1 1 2 2 0 1 0 1 2 0 0 1 0 0 18 4 1 1 2099.1487 LSD1-FL-His LSD1-FL-His 474 491 yes yes 3;4 2.412E-21 95.814 By MS/MS By MS/MS By MS/MS 1 2 1 107420000 1431800 0 0 0 61629000 44357000 0 0 3721 24 4099 22254;22255;22256;22257 16756;16757;16758;16759 16759 3 8642900 0 0 0 87741000 63231000 0 0 RDLNELAEQNLILR EELVEHFSVSPQTIRRDLNELAEQNLILRH RRDLNELAEQNLILRHHGGAALPSSSVNTP R R D L R H 1 2 2 1 0 1 2 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 14 1 2 1 1695.9268 P0ACL0 P0ACL0 38 51 glpR Glycerol-3-phosphate regulon repressor yes yes 3 5.5615E-18 118.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 73424000 24922000 24379000 0 0 11341000 12782000 0 0 3722 215 4100 22258;22259;22260;22261 16760;16761;16762;16763 16761 4 24922000 24954000 0 0 13681000 14160000 0 0 RDRFLSAPEAVE LHTGQSLEQIERDTERDRFLSAPEAVEYGL DTERDRFLSAPEAVEYGLVDSILTHRN___ E R D V E Y 2 2 0 1 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 12 2 1 3 1388.7048 P0A6G7 P0A6G7 184 195 clpP ATP-dependent Clp protease proteolytic subunit yes yes 3 0.00071329 56.225 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 1 2 1 1 49474000 6843700 6061200 7517800 8083900 3594300 5843000 5954000 5576600 3723 69 4101 22262;22263;22264;22265;22266;22267;22268;22269;22270;22271;22272 16764;16765;16766;16767;16768 16766 5 100670000 89481000 63877000 61289000 55338000 50480000 45824000 32003000 RDVAELVDWFDARDP MALRRHMSGDIDNFPRDVAELVDWFDARDP RDVAELVDWFDARDPNPHVRPVPGYGEKIP P R D D P N 2 2 0 4 0 0 1 0 0 0 1 0 0 1 1 0 0 1 0 2 0 0 15 2 1 2 1802.8588 P0ADV5 P0ADV5 137 151 yhbW Uncharacterized protein YhbW yes yes 3 0.0012714 60.918 By MS/MS By MS/MS 1 1 7540500 0 0 0 0 3241800 4298600 0 0 3724 226 4102 22273;22274 16769;16770 16769 2 0 0 0 0 4615400 6127700 0 0 RDVQLLR MASGESQWITSPQARRDVQLLRAQSHAILT WITSPQARRDVQLLRAQSHAILTSSATVLA R R D L R A 0 2 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 7 1 0 0 898.53485 P25539 P25539 178 184 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 0.0014371 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29174000 9614000 9343100 0 0 5985200 4231500 0 0 3725 315 4103 22275;22276;22277;22278 16771;16772;16773;16774 16771 4 9614000 9563600 0 0 7219900 4687600 0 0 RDVRINSNEE HSLQEAQDIARSILERDVRINSNEELALPK RSILERDVRINSNEELALPKEKLQELHI__ E R D E E L 0 2 2 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 10 2 1 0 1230.5953 P45578 P45578 149 158 luxS S-ribosylhomocysteine lyase yes yes 2;3 3.349E-05 68.657 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 1 1 97813000 2694200 10434000 23830000 11691000 12196000 9960900 13933000 13074000 3726 370 4104 22279;22280;22281;22282;22283;22284;22285;22286;22287;22288;22289 16775;16776;16777;16778;16779;16780 16780 4 41395000 159120000 202480000 88634000 187770000 150970000 107230000 75028000 RDWYVVDATGK ______________________________ ETVKRDWYVVDATGKTLGRLATELARRLRG K R D G K T 1 1 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 1 1 2 0 0 11 1 0 1 1308.6463 P0AA10 P0AA10 13 23 rplM 50S ribosomal protein L13 yes yes 2 9.1739E-42 162.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60033000 16071000 17629000 0 0 12326000 14007000 0 0 3727 182 4105 22290;22291;22292;22293 16781;16782;16783;16784 16784 4 16071000 18045000 0 0 14869000 15517000 0 0 REEESAAAAEVEER LEEMLEKLEVVVNERREEESAAAAEVEERT RREEESAAAAEVEERTRKLQQYREMLIADG R R E E R T 4 2 0 0 0 0 6 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 14 1 6 4 1574.7172 P0ACF8 P0ACF8 41 54 hns DNA-binding protein H-NS yes yes 2;3 4.1111E-301 270.79 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 2367700000 689880000 775480000 0 0 480110000 422190000 0 0 3728 210 4106 22294;22295;22296;22297;22298;22299;22300;22301;22302;22303;22304 16785;16786;16787;16788;16789;16790;16791;16792;16793;16794 16792 10 714940000 801080000 0 0 596290000 467690000 0 0 REGTDLFLK ______________________________ KLKLSRREGTDLFLKSGVRAIDTKCKIEQA R R E L K S 0 1 0 1 0 0 1 1 0 0 2 1 0 1 0 0 1 0 0 0 0 0 9 1 1 0 1077.5819 P0A7V8 P0A7V8 14 22 rpsD 30S ribosomal protein S4 yes yes 2 2.6692E-06 107 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 292960000 83577000 78010000 0 0 57019000 74357000 0 0 3729 130 4107 22305;22306;22307;22308 16795;16796;16797;16798;16799 16796 5 83577000 79852000 0 0 68782000 82371000 0 0 REIELEDKFENMGA SFGAPTITKDGVSVAREIELEDKFENMGAQ AREIELEDKFENMGAQMVKEVASKANDAAG A R E G A Q 1 1 1 1 0 0 4 1 0 1 1 1 1 1 0 0 0 0 0 0 0 0 14 2 4 0 1679.7825 P0A6F5 P0A6F5 58 71 groL 60 kDa chaperonin yes yes 3 8.6448E-09 78.486 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 58804000 5028900 6798200 0 0 22772000 24205000 0 0 3730 68 4108;4109 22309;22310;22311;22312;22313;22314;22315;22316 16800;16801;16802;16803;16804;16805;16806;16807 16807 78 8 30357000 40687000 0 0 32420000 34505000 0 0 RELAVEVGK ISALDEKLLALLAERRELAVEVGKAKLLSH ALLAERRELAVEVGKAKLLSHRPVRDIDRE R R E G K A 1 1 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 1 2 1 999.57129 P0A9J8 P0A9J8 29 37 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.0016234 85.676 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 1 1 1 1 1 1 41782000 7766900 13400000 1932100 2467300 7709100 6568000 0 1938700 3731 166 4110 22317;22318;22319;22320;22321;22322;22323;22324 16808;16809;16810;16811 16809 4 15476000 13716000 16417000 18706000 9299600 7275900 0 11126000 RELSHKLDHEP PIHIVKELNVYLRTARELSHKLDHEPSAEE LRTARELSHKLDHEPSAEEIAEQLDKPVDD A R E E P S 0 1 0 1 0 0 2 0 2 0 2 1 0 0 1 1 0 0 0 0 0 0 11 2 2 0 1359.6895 P13445 P13445 183 193 rpoS RNA polymerase sigma factor RpoS yes yes 3 0.016584 22.72 By MS/MS By MS/MS By MS/MS 1 1 1 3488700 742690 569850 0 0 0 2176100 0 0 3732 279 4111 22325;22326;22327 16812 16812 0 4483200 3410600 0 0 0 3102100 0 0 REQEAAELKR QQDDMTKNAQAEKARREQEAAELKRKAEEE AEKARREQEAAELKRKAEEEARRKLEEEAR R R E K R K 2 2 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 10 2 3 2 1228.6524 P0A705;P0A705-3;P0A705-2 P0A705 176 185 infB Translation initiation factor IF-2 yes no 3 0.00032658 66.267 By MS/MS By matching By MS/MS By matching 1 1 1 1 21297000 8524500 6500400 0 0 3817600 2454800 0 0 3733 90 4112 22328;22329;22330;22331 16813;16814;16815 16814 3 8524500 6653800 0 0 4605200 2719400 0 0 REQIKSLNNQFASFIDKVRFLE NVEIDPEIQKVKSREREQIKSLNNQFASFI NNQFASFIDKVRFLEQQNQVLQTKWELLQQ E R E L E Q 1 2 2 1 0 2 2 0 0 2 2 2 0 3 0 2 0 0 0 1 0 0 22 4 1 1 2681.4289 CON__P04264 CON__P04264 181 202 no no 4 0.013917 16.506 By MS/MS 1 5484300 0 0 0 0 5484300 0 0 0 + 3734 9 4113 22332 16816 16816 1 0 0 0 0 84436000 0 0 0 RFEEHLQHEAQER GSASLSLHRFAADVRRFEEHLQHEAQERLQ VRRFEEHLQHEAQERLQTMVSHFTIDPSRI R R F E R L 1 2 0 0 0 2 4 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 13 1 4 1 1707.8077 P39177 P39177 57 69 uspG Universal stress protein G yes yes 4 0.00025057 61.657 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30845000 9312000 11944000 0 0 5027900 4561700 0 0 3735 362 4114 22333;22334;22335;22336 16817;16818;16819 16818 3 9312000 12226000 0 0 6065200 5053300 0 0 RFGDVGADTLGHIAE MVLDSFGIGATEDAERFGDVGADTLGHIAE RFGDVGADTLGHIAEACAKGEADNGRKGPL E R F A E A 2 1 0 2 0 0 1 3 1 1 1 0 0 1 0 0 1 0 0 1 0 0 15 1 0 2 1556.7583 P0A6K6 P0A6K6 22 36 deoB Phosphopentomutase yes yes 2;3 1.6688E-17 87.519 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 1 2 2 113340000 22664000 31628000 10963000 9745900 7339400 4184600 13371000 13443000 3736 75 4115 22337;22338;22339;22340;22341;22342;22343;22344;22345;22346;22347;22348;22349;22350 16820;16821;16822;16823;16824;16825;16826;16827 16822 8 348220000 482340000 93147000 73889000 113000000 63424000 102900000 77146000 RFGGQILDTVDIE IYSARKGIRTGLMGERFGGQILDTVDIENY GERFGGQILDTVDIENYISVPKTEGQKLAG E R F I E N 0 1 0 2 0 1 1 2 0 2 1 0 0 1 0 0 1 0 0 1 0 0 13 1 0 0 1461.7464 P35340 P35340 244 256 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 9.892E-11 86.624 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 39583000 1499900 1268300 0 1985500 10903000 16351000 1530900 6044500 3737 348 4116 22351;22352;22353;22354;22355;22356;22357 16828;16829;16830;16831;16832 16831 5 23045000 19341000 0 15053000 167860000 247830000 11782000 34688000 RFGLLGYEAATLEDVGR WLFELNAKQREVLARRFGLLGYEAATLEDV GLLGYEAATLEDVGREIGLTRERVRQIQVE R R F G R E 2 2 0 1 0 0 2 3 0 0 3 0 0 1 0 0 1 0 1 1 0 0 17 1 2 2 1865.9636 P13445 P13445 277 293 rpoS RNA polymerase sigma factor RpoS yes yes 3 0.0051213 16.123 By MS/MS 1 0 0 0 0 0 0 0 0 0 3738 279 4117 22358 16833 16833 1 0 0 0 0 0 0 0 0 RFIFLEEGDIAEITR NFIASDQLALLPVTRRFIFLEEGDIAEITR RFIFLEEGDIAEITRRSVNIFDKTGAEVKR R R F T R R 1 2 0 1 0 0 3 1 0 3 1 0 0 2 0 0 1 0 0 0 0 0 15 1 3 1 1807.9468 P17169 P17169 203 217 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 4.8033E-32 142.54 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 182260000 27336000 26344000 0 0 77495000 51085000 0 0 3739 288 4118 22359;22360;22361;22362;22363;22364;22365;22366;22367;22368 16834;16835;16836;16837;16838;16839 16836 6 32442000 26966000 0 0 105490000 56590000 0 0 RFLPNLHSHR VTGNNRSHALNATKRRFLPNLHSHRFWVES NATKRRFLPNLHSHRFWVESEKRFVTLRVS R R F H R F 0 2 1 0 0 0 0 0 2 0 2 0 0 1 1 1 0 0 0 0 0 0 10 1 0 1 1275.6949 P0A7M2 P0A7M2 28 37 rpmB 50S ribosomal protein L28 yes yes 3 0.016253 26.786 By matching By MS/MS By MS/MS 1 1 1 7428100 0 2122800 0 0 2166300 3139000 0 0 3740 113 4119 22369;22370;22371 16840;16841 16841 1 0 2172900 0 0 2613200 3477300 0 0 RFLWIGCSDSRVP EDPGFFEKLAQAQKPRFLWIGCSDSRVPAE KPRFLWIGCSDSRVPAERLTGLEPGELFVH P R F V P A 0 2 0 1 1 0 0 1 0 1 1 0 0 1 1 2 0 1 0 1 0 0 13 2 0 0 1591.7929 P61517 P61517 36 48 can Carbonic anhydrase 2 yes yes 3 0.0049803 43.991 By MS/MS By MS/MS 1 1 2372100 0 0 0 0 978330 1393800 0 0 3741 386 4120 22372;22373 16842;16843 16843 2 0 0 0 0 1392800 1986800 0 0 RFMIDIDQAQR VEQDIRSRTLRNIQRRFMIDIDQAQRVAKV NIQRRFMIDIDQAQRVAKVAANFFDQVENE R R F Q R V 1 2 0 2 0 2 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 11 1 0 1 1391.698 P25552 P25552 319 329 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 3 0.0013269 36.417 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 18980000 5049000 0 0 0 7273000 6657600 0 0 3742 316 4121 22374;22375;22376;22377 16844;16845;16846 16845 1 5049000 0 0 0 8773400 7375100 0 0 RFQAAMLAADDDRHITTE PLTPEQDAAARASLERFQAAMLAADDDRHI AAMLAADDDRHITTEIANATPFYYAEDDHQ E R F T E I 4 2 0 3 0 1 1 0 1 1 1 0 1 1 0 0 2 0 0 0 0 0 18 2 0 4 2059.9745 P0A744 P0A744 156 173 msrA Peptide methionine sulfoxide reductase MsrA yes yes 3 3.3097E-09 71.594 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 62173000 8257000 11537000 0 0 5858700 6173900 13930000 16416000 3743 94 4122;4123 22378;22379;22380;22381;22382;22383;22384;22385;22386 16847;16848;16849;16850 16850 106 3 126870000 175950000 0 0 90200000 93574000 107210000 94208000 RFQDEEVQR NPQNTLFAIKRLIGRRFQDEEVQRDVSIMP KRLIGRRFQDEEVQRDVSIMPFKIIAADNG R R F Q R D 0 2 0 1 0 2 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 9 1 2 0 1205.5789 P0A6Y8 P0A6Y8 76 84 dnaK Chaperone protein DnaK yes yes 2;3 1.1716E-149 217.64 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 2 337120000 139630000 97392000 1077700 0 46905000 52119000 0 0 3744 86 4124 22387;22388;22389;22390;22391;22392;22393;22394;22395 16851;16852;16853;16854;16855;16856;16857;16858 16851 7 139630000 99691000 9157100 0 56582000 57737000 0 0 RFSLEGGDALIPMLK EGLERYLGAKFPGAKRFSLEGGDALIPMLK RFSLEGGDALIPMLKEMIRHAGNSGTREVV K R F L K E 1 1 0 1 0 0 1 2 0 1 3 1 1 1 1 1 0 0 0 0 0 0 15 1 1 2 1645.8862 P0AFG3 P0AFG3 226 240 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 3.6264E-13 106.52 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 66540000 15774000 24032000 0 0 12038000 14696000 0 0 3745 246 4125 22396;22397;22398;22399 16859;16860;16861;16862;16863 16860 5 15774000 24599000 0 0 14522000 16280000 0 0 RFTVLISPHVNKDARDQYE GAQVRGPIPLPTRKERFTVLISPHVNKDAR LISPHVNKDARDQYEIRTHLRLVDIVEPTE E R F Y E I 1 2 1 2 0 1 1 0 1 1 1 1 0 1 1 1 1 0 1 2 0 0 19 3 0 2 2287.1709 P0A7R5 P0A7R5 48 66 rpsJ 30S ribosomal protein S10 yes yes 3;4 5.3676E-14 78.021 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 298080000 0 0 49638000 59254000 0 0 67117000 122070000 3746 120 4126 22400;22401;22402;22403;22404;22405;22406 16864;16865;16866;16867;16868;16869 16868 6 0 0 421770000 449240000 0 0 516550000 700530000 RFVVECDGEK LSDLYDKHIHDQSERRFVVECDGEKAGLVE DQSERRFVVECDGEKAGLVELVEINHVHRR R R F E K A 0 1 0 1 1 0 2 1 0 0 0 1 0 1 0 0 0 0 0 2 0 0 10 1 2 0 1237.5761 P0A951 P0A951 59 68 speG Spermidine N(1)-acetyltransferase yes yes 2 8.7557E-07 91.584 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 13723000 3880400 3566800 0 0 0 3573300 0 2702800 3747 160 4127 22407;22408;22409;22410;22411 16870;16871;16872;16873 16872 4 3880400 3651000 0 0 0 3958400 0 15511000 RGEASINIK TGMVPETSVLLVDEKRGEASINIKNTDDHP LLVDEKRGEASINIKNTDDHPSLLYTTIVD K R G I K N 1 1 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 0 9 1 1 1 986.55089 P28722 P28722 35 43 yhcA Uncharacterized fimbrial chaperone YhcA yes yes 2 0.0064363 30.612 By MS/MS 1 0 0 0 0 0 0 0 0 0 3748 327 4128 22412 16874 16874 27 0 0 0 0 0 0 0 0 0 RGEDIIDFSMGNPDGATPPHIVEK YVFNITAELKMAARRRGEDIIDFSMGNPDG MGNPDGATPPHIVEKLCTVAQRPDTHGYST R R G E K L 1 1 1 3 0 0 2 3 1 3 0 1 1 1 3 1 1 0 0 1 0 0 24 1 2 4 2594.2435 P77434 P77434 34 57 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 3;4 2.1244E-09 56.72 By MS/MS By MS/MS By MS/MS 1 1 1 24876000 0 9299300 0 0 9163800 6412400 0 0 3749 433 4129 22413;22414;22415 16875;16876 16875 2 0 9518800 0 0 11054000 7103500 0 0 RGEQPLLAPLMR STERQQLAALIDSYRRGEQPLLAPLMRIKH SYRRGEQPLLAPLMRIKHYMALYPDAWLSG R R G M R I 1 2 0 0 0 1 1 1 0 0 3 0 1 0 2 0 0 0 0 0 0 0 12 1 1 3 1379.7707 P24252 P24252 124 135 ybgA Uncharacterized protein YbgA yes yes 2;3 4.2815E-14 120.57 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 306100000 80416000 80222000 0 0 70180000 75279000 0 0 3750 313 4130;4131 22416;22417;22418;22419;22420;22421;22422;22423;22424;22425;22426;22427 16877;16878;16879;16880;16881;16882;16883;16884;16885;16886;16887;16888 16887 261 12 80416000 82115000 0 0 84658000 83392000 0 0 RGESSGPDVSR QHGIVFIDEIDKICKRGESSGPDVSREGVQ KICKRGESSGPDVSREGVQRDLLPLVEGCT K R G S R E 0 2 0 1 0 0 1 2 0 0 0 0 0 0 1 3 0 0 0 1 0 0 11 1 1 1 1145.5425 P0A6H5 P0A6H5 264 274 hslU ATP-dependent protease ATPase subunit HslU yes yes 3 7.4047E-05 66.538 By MS/MS By MS/MS 1 1 14889000 6285600 8603800 0 0 0 0 0 0 3751 71 4132 22428;22429 16889;16890 16890 2 6285600 8806800 0 0 0 0 0 0 RGFEGGQMPLYR RGHKGQKSRSGGGVRRGFEGGQMPLYRRLP GVRRGFEGGQMPLYRRLPKFGFTSRKAAIT R R G Y R R 0 2 0 0 0 1 1 3 0 0 1 0 1 1 1 0 0 0 1 0 0 0 12 1 1 1 1409.6874 P02413 P02413 48 59 rplO 50S ribosomal protein L15 yes yes 2;3 1.2279E-26 118.03 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 1239600000 535350000 151010000 0 0 254440000 298850000 0 0 3752 37 4133;4134 22430;22431;22432;22433;22434;22435;22436;22437;22438;22439;22440;22441;22442;22443;22444;22445 16891;16892;16893;16894;16895;16896;16897;16898;16899;16900;16901;16902 16902 67 11 535350000 154580000 0 0 306930000 331060000 0 0 RGFVLGYSHR ADSAVNVTKFCADYKRGFVLGYSHRMYEKT CADYKRGFVLGYSHRMYEKTGDRQLSAWEA K R G H R M 0 2 0 0 0 0 0 2 1 0 1 0 0 1 0 1 0 0 1 1 0 0 10 1 0 0 1190.6309 P64574 P64574 33 42 yghW Uncharacterized protein YghW yes yes 3 0.019266 23.012 By MS/MS 1 9409900 9409900 0 0 0 0 0 0 0 3753 396 4135 22446 16903 16903 1 9409900 0 0 0 0 0 0 0 RGGFESYQER SINDNWPRETPPGPKRGGFESYQERVEGNK PPGPKRGGFESYQERVEGNKVRERSPSFGE K R G E R V 0 2 0 0 0 1 2 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 10 1 2 0 1227.5632 P21179 P21179 479 488 katE Catalase HPII yes yes 3 6.0417E-05 91.636 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44867000 11145000 16914000 0 0 8814900 7993000 0 0 3754 293 4136 22447;22448;22449;22450 16904;16905;16906;16907 16905 4 11145000 17313000 0 0 10633000 8854500 0 0 RGIIKVGEEVE FSISGRGTVVTGRVERGIIKVGEEVEIVGI GRVERGIIKVGEEVEIVGIKETQKSTCTGV E R G V E I 0 1 0 0 0 0 3 2 0 2 0 1 0 0 0 0 0 0 0 2 0 0 11 2 2 0 1227.6823 P0CE48;P0CE47 P0CE48 234 244 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3 0.00097632 64.439 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 129960000 6256200 10559000 22735000 23559000 5316700 9921600 21145000 30471000 3755 269 4137 22451;22452;22453;22454;22455;22456;22457;22458 16908 16908 1 96126000 161020000 193180000 178610000 81855000 150380000 162740000 174870000 RGIPVYAPDNVNHPLWVE GEKAFYGSVARLAAERGIPVYAPDNVNHPL PVYAPDNVNHPLWVERIAQLSPDVIFSFYY E R G V E R 1 1 2 1 0 0 1 1 1 1 1 0 0 0 3 0 0 1 1 3 0 0 18 1 0 4 2075.0589 P77398 P77398 52 69 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 7.3349E-09 71.601 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 1 1 23561000 2425900 7183700 1233900 2896700 5826200 0 1617900 2376700 3756 432 4138 22459;22460;22461;22462;22463;22464;22465;22466 16909;16910;16911 16910 2 37273000 55898000 10484000 21961000 89700000 0 12452000 13640000 RGLALLDEE QVLKTEEEQFARTLERGLALLDEELAKLSG FARTLERGLALLDEELAKLSGDTLDGETAF E R G E E L 1 1 0 1 0 0 2 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 9 1 1 1 1014.5346 P00957 P00957 373 381 alaS Alanine--tRNA ligase yes yes 2 0.010578 53.166 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 30250000 4743700 0 4572300 4406900 0 0 6042600 10485000 3757 33 4139 22467;22468;22469;22470;22471;22472 16912;16913 16913 1 72886000 0 38850000 33411000 0 0 46505000 60170000 RGLSIQR ASFEQALDWLVKESRRGLSIQRYKGLGEMN DWLVKESRRGLSIQRYKGLGEMNPEQLWET R R G Q R Y 0 2 0 0 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 7 1 0 0 828.49298 P0AES6 P0AES6 732 738 gyrB DNA gyrase subunit B yes yes 2 0.0034109 73.26 By MS/MS By MS/MS 1 1 35017000 19158000 15859000 0 0 0 0 0 0 3758 239 4140 22473;22474 16914;16915 16915 2 19158000 16234000 0 0 0 0 0 0 RGMQNTPDMR SLLRELYFATEKQLRRGMQNTPDMRERVRH EKQLRRGMQNTPDMRERVRHHQLQALALLR R R G M R E 0 2 1 1 0 1 0 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 10 1 0 1 1204.5441 P27249 P27249 627 636 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.0097024 26.118 By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 7067000 2504100 2868400 0 0 683440 1011200 0 0 3759 320 4141 22475;22476;22477;22478;22479 16916 16916 1 2504100 2936100 0 0 824440 1143700 0 0 RGQVLAKPGTIKPHTKFE NVGVLLRGIKREEIERGQVLAKPGTIKPHT VLAKPGTIKPHTKFESEVYILSKDEGGRHT E R G F E S 1 1 0 0 0 1 1 2 1 1 1 3 0 1 2 0 2 0 0 1 0 0 18 4 0 3 2006.1425 P0CE48;P0CE47 P0CE48 289 306 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 4;5 0.00043053 44.005 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 2 2 319290000 10864000 21681000 38599000 46205000 7223700 9068500 82450000 103200000 3760 269 4142 22480;22481;22482;22483;22484;22485;22486;22487;22488;22489;22490;22491;22492 16917;16918;16919;16920;16921;16922;16923;16924;16925;16926 16918 10 166920000 330640000 327970000 350300000 111220000 137450000 634560000 592270000 RGYMNIDE TGNPRHDQLLMLIAERGYMNIDELANLLDV LLMLIAERGYMNIDELANLLDVSTQTVRRD E R G D E L 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 8 1 0 0 996.43348 P32144 P32144 22 29 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 0.0060807 70.912 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 27801000 2480900 1569900 5815900 6959500 0 845910 3882500 6246600 3761 339 4143 22493;22494;22495;22496;22497;22498;22499 16927;16928;16929 16927 3 38118000 23941000 49417000 52764000 0 12821000 29881000 35848000 RGYSFDDEEHALGLR VSPVHLKEDLAQTRKRGYSFDDEEHALGLR RGYSFDDEEHALGLRCLAACIFDEHREPFA K R G L R C 1 2 0 2 0 0 2 2 1 0 2 0 0 1 0 1 0 0 1 0 0 0 15 1 2 1 1763.8227 P16528 P16528 207 221 iclR Acetate operon repressor yes yes 3 1.5685E-06 59.862 By MS/MS 1 5580200 5580200 0 0 0 0 0 0 0 3762 285 4144 22500 16930 16930 0 5580200 0 0 0 0 0 0 0 RHEAWITLEK EDGFGETLLSREKAKRHEAWITLEKAYEDA REKAKRHEAWITLEKAYEDAETVTGVINGK K R H E K A 1 1 0 0 0 0 2 0 1 1 1 1 0 0 0 0 1 1 0 0 0 0 10 1 2 1 1281.683 P0AG67 P0AG67 91 100 rpsA 30S ribosomal protein S1 yes yes 3 0.013454 28.232 By MS/MS By matching By matching By matching 1 1 1 1 39953000 6359000 7743800 0 0 20046000 5804000 0 0 3763 261 4145 22501;22502;22503;22504 16931 16931 1 6359000 7926600 0 0 24182000 6429600 0 0 RHGFLPLKE IEPSLEAAFVDYGAERHGFLPLKEIAREYF VDYGAERHGFLPLKEIAREYFPANYSAHGR E R H K E I 0 1 0 0 0 0 1 1 1 0 2 1 0 1 1 0 0 0 0 0 0 0 9 2 0 1 1095.6189 P21513 P21513 64 72 rne Ribonuclease E yes yes 3 0.012051 28.013 By MS/MS 1 0 0 0 0 0 0 0 0 0 3764 297 4146 22505 16932 16932 1 0 0 0 0 0 0 0 0 RHGHNEADEPSATQPLMYQK NTFKRDVFIDLVCYRRHGHNEADEPSATQP EADEPSATQPLMYQKIKKHPTPRKIYADKL R R H Q K I 2 1 1 1 0 2 2 1 2 0 1 1 1 0 2 1 1 0 1 0 0 0 20 1 2 4 2308.0655 P0AFG3 P0AFG3 457 476 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3;4 0.0065866 29.172 By MS/MS By matching By MS/MS 1 2 1 14354000 4924900 6112900 0 0 0 3316100 0 0 3765 246 4147 22506;22507;22508;22509 16933;16934 16933 2 4924900 6257200 0 0 0 3673500 0 0 RHGQRIGR EVEVVNTLVVKGKVKRHGQRIGRRSDWKKA VVKGKVKRHGQRIGRRSDWKKAYVTLKEGQ K R H G R R 0 3 0 0 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 978.55838 P0ADZ0 P0ADZ0 69 76 rplW 50S ribosomal protein L23 yes yes 2 0.021723 29.573 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 82011000 15534000 28909000 0 0 17559000 20009000 0 0 3766 230 4148 22510;22511;22512;22513 16935;16936;16937 16935 0 15534000 29592000 0 0 21181000 22166000 0 0 RHIGPDAAQQQE TQTLSQLENSGAFIERHIGPDAAQQQEMLN FIERHIGPDAAQQQEMLNAVGAQSLNALTG E R H Q E M 2 1 0 1 0 3 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 12 1 0 3 1348.6484 P33195 P33195 17 28 gcvP Glycine dehydrogenase (decarboxylating) yes yes 2;3 5.8951E-06 74.162 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 112630000 9747700 15674000 16016000 17641000 7901900 7240200 18797000 19616000 3767 344 4149 22514;22515;22516;22517;22518;22519;22520;22521;22522;22523;22524;22525;22526;22527;22528;22529 16938;16939;16940;16941;16942;16943;16944;16945;16946;16947;16948;16949 16947 12 149770000 239030000 136080000 133750000 121660000 109740000 144670000 112570000 RHLQQPLCNIPEAR TGIYSTTLRQLRHARRHLQQPLCNIPEARK RRHLQQPLCNIPEARKLFLSILRHPGAVRR R R H A R K 1 2 1 0 1 2 1 0 1 1 2 0 0 0 2 0 0 0 0 0 0 0 14 1 1 3 1730.8999 P27249 P27249 405 418 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.010655 30.961 By matching By matching By MS/MS 1 1 1 8197500 2547200 3528600 0 0 2121700 0 0 0 3768 320 4150 22530;22531;22532 16950 16950 0 2547200 3611900 0 0 2559400 0 0 0 RHMSGDIDNFPR GRAPGSDQRTMMALRRHMSGDIDNFPRDVA ALRRHMSGDIDNFPRDVAELVDWFDARDPN R R H P R D 0 2 1 2 0 0 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 12 1 0 1 1443.6677 P0ADV5 P0ADV5 126 137 yhbW Uncharacterized protein YhbW yes yes 3 6.3966E-85 162.32 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 186330000 62742000 43057000 0 0 42236000 38298000 0 0 3769 226 4151;4152 22533;22534;22535;22536;22537;22538;22539;22540 16951;16952;16953;16954;16955;16956;16957;16958 16958 203 8 62742000 44073000 0 0 50949000 42426000 0 0 RHSVSTPSLEASHHATSD PLPEITNVFSPTLVRRHSVSTPSLEASHHA VSTPSLEASHHATSD_______________ R R H S D - 2 1 0 1 0 0 1 0 3 0 1 0 0 0 1 5 2 0 0 1 0 0 18 1 1 3 1917.8929 P03024 P03024 326 343 galR HTH-type transcriptional regulator GalR yes yes 4 0.010769 27.032 By matching By MS/MS By matching 1 1 1 12705000 4543700 4359400 0 0 3802000 0 0 0 3770 42 4153 22541;22542;22543 16959 16959 1 4543700 4462300 0 0 4586400 0 0 0 RIDAIDVTSK GCHGSDTKFNLFNSRRIDAIDVTSKTEPHP LFNSRRIDAIDVTSKTEPHP__________ R R I S K T 1 1 0 2 0 0 0 0 0 2 0 1 0 0 0 1 1 0 0 1 0 0 10 1 0 1 1116.6139 P11349 P11349 498 507 narH Respiratory nitrate reductase 1 beta chain yes yes 2 0.0026882 64.04 By MS/MS By MS/MS 1 1 7487400 4074800 3412600 0 0 0 0 0 0 3771 276 4154 22544;22545 16960 16960 1 4074800 3493100 0 0 0 0 0 0 RIEAIPQIDK PMCLDAFPKLVCFKKRIEAIPQIDKYLKSS VCFKKRIEAIPQIDKYLKSSKYIAWPLQGW K R I D K Y 1 1 0 1 0 1 1 0 0 3 0 1 0 0 1 0 0 0 0 0 0 0 10 1 1 2 1181.6768 GST-Nek6 GST-Nek6 182 191 yes yes 2;3 5.1974E-62 190.57 By MS/MS By MS/MS 2 2 565860000 0 0 0 0 272720000 293140000 0 0 3772 23 4155 22546;22547;22548;22549 16961;16962;16963;16964 16963 4 0 0 0 0 328980000 324730000 0 0 RIEALAEDFSDK QALPSRIEQMLSQDKRIEALAEDFSDKHHA QDKRIEALAEDFSDKHHALFLGRGDQYPIA K R I D K H 2 1 0 2 0 0 2 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 12 1 2 2 1392.6885 P17169 P17169 454 465 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 4.3648E-57 188.91 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 2 182020000 50923000 58100000 0 0 21688000 51314000 0 0 3773 288 4156 22550;22551;22552;22553;22554;22555;22556;22557;22558 16965;16966;16967;16968 16968 3 70667000 81912000 0 0 30876000 59836000 0 0 RIEALAEDFSDKHHALFLGR QALPSRIEQMLSQDKRIEALAEDFSDKHHA AEDFSDKHHALFLGRGDQYPIALEGALKLK K R I G R G 3 2 0 2 0 0 2 1 2 1 3 1 0 2 0 1 0 0 0 0 0 0 20 2 2 3 2324.2026 P17169 P17169 454 473 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4;5 9.1365E-54 147.16 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 570820000 143240000 151920000 0 0 113730000 161940000 0 0 3774 288 4157 22559;22560;22561;22562;22563;22564;22565;22566;22567;22568;22569;22570 16969;16970;16971;16972;16973;16974;16975;16976 16976 8 143240000 155500000 0 0 181220000 179390000 0 0 RIEAVTGEGAIATVHADSDR LFRIISESGTAAGVRRIEAVTGEGAIATVH TGEGAIATVHADSDRLSEVAHLLKGDSNNL R R I D R L 4 2 0 2 0 0 2 2 1 2 0 0 0 0 0 1 2 0 0 2 0 0 20 1 2 4 2067.0345 P00957 P00957 694 713 alaS Alanine--tRNA ligase yes yes 3 9.2512E-13 81.665 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24764000 6391200 7644200 0 0 5183500 5545400 0 0 3775 33 4158 22571;22572;22573;22574 16977;16978;16979;16980 16980 4 6391200 7824700 0 0 6252800 6143100 0 0 RIGGITLDADLAPGE MFAAVGNHVVELHRERIGGITLDADLAPGE RIGGITLDADLAPGEYRPLTEEEIASVV__ E R I G E Y 2 1 0 2 0 0 1 3 0 2 2 0 0 0 1 0 1 0 0 0 0 0 15 1 0 3 1496.7835 P0AA43 P0AA43 204 218 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 8.3293E-05 78.096 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 78656000 9544400 10221000 3652400 3090700 35387000 13277000 0 3483900 3776 183 4159 22575;22576;22577;22578;22579;22580;22581 16981;16982;16983;16984;16985;16986;16987 16984 7 146650000 155870000 31034000 23433000 544810000 201230000 0 19993000 RIGGITLDADLAPGEYRPLTE MFAAVGNHVVELHRERIGGITLDADLAPGE LDADLAPGEYRPLTEEEIASVV________ E R I T E E 2 2 0 2 0 0 2 3 0 2 3 0 0 0 2 0 2 0 1 0 0 0 21 2 1 4 2256.175 P0AA43 P0AA43 204 224 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 3 0.015384 19.039 By MS/MS By MS/MS 1 1 3363400 0 0 0 0 1899200 1464200 0 0 3777 183 4160 22582;22583 16988 16988 1 0 0 0 0 29240000 22192000 0 0 RIIATLQGE QGIWLGEHRIHGGSRRIIATLQGE______ IHGGSRRIIATLQGE_______________ R R I G E - 1 1 0 0 0 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 9 1 0 1 999.57129 P0AF48 P0AF48 130 138 yjbQ UPF0047 protein YjbQ yes yes 2 2.502E-05 107.29 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 52356000 17058000 16282000 3510900 0 7940300 7564500 0 0 3778 243 4161 22584;22585;22586;22587;22588;22589;22590 16989;16990;16991;16992 16990 4 17058000 23150000 29831000 0 9578400 15300000 0 0 RIINEPTAAALAYGLDK QATKDAGRIAGLEVKRIINEPTAAALAYGL INEPTAAALAYGLDKGTGNRTIAVYDLGGG K R I D K G 4 1 1 1 0 0 1 1 0 2 2 1 0 0 1 0 1 0 1 0 0 0 17 1 1 5 1814.989 P0A6Y8 P0A6Y8 167 183 dnaK Chaperone protein DnaK yes yes 2;3 4.6386E-30 112.16 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 162260000 54016000 57634000 0 0 26113000 24493000 0 0 3779 86 4162 22591;22592;22593;22594;22595;22596;22597;22598 16993;16994;16995;16996;16997;16998;16999 16993 7 54016000 58994000 0 0 31500000 27133000 0 0 RILHKLE SLVDYLSAGHFSIYERILHKLEGNGQLARA AGHFSIYERILHKLEGNGQLARAAKIWPQL E R I L E G 0 1 0 0 0 0 1 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 7 2 0 0 907.56034 P0AFX4 P0AFX4 75 81 rsd Regulator of sigma D yes yes 2 0.0088003 62.714 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 36120000 4005100 4384600 0 6992500 1054000 636380 8667900 10379000 3780 251 4163 22599;22600;22601;22602;22603;22604;22605;22606 17000;17001 17001 2 61537000 66866000 0 53014000 16227000 9645300 66710000 59565000 RIPEDASTLHR GKALRQLPLTDEQKKRIPEDASTLHRLLGA EQKKRIPEDASTLHRLLGAQPGSQRLRHHA K R I H R L 1 2 0 1 0 0 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 11 1 1 2 1293.6789 P04993 P04993 232 242 recD RecBCD enzyme subunit RecD yes yes 3 0.017257 29.807 By matching By matching By matching By MS/MS 1 1 1 1 40172000 11169000 14560000 0 0 7609800 6832800 0 0 3781 46 4164 22607;22608;22609;22610 17002 17002 0 11169000 14904000 0 0 9179700 7569200 0 0 RISNEESISAMFEH VRTLTLSGMLAEAIRRISNEESISAMFEH_ RRISNEESISAMFEH_______________ R R I E H - 1 1 1 0 0 0 3 0 1 2 0 0 1 1 0 3 0 0 0 0 0 0 14 1 3 1 1648.7515 P0A717 P0A717 302 315 prs Ribose-phosphate pyrophosphokinase yes yes 3 7.2347E-10 75.589 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27821000 6143400 7096400 0 0 6683500 7897400 0 0 3782 91 4165 22611;22612;22613;22614 17003;17004;17005;17006 17003 3 6143400 7263900 0 0 8062300 8748600 0 0 RISTAINEVVLHPGK RFLLEAQVCQQDCQKRISTAINEVVLHPGK RISTAINEVVLHPGKVAHMIEFEVYIDEIF K R I G K V 1 1 1 0 0 0 1 1 1 2 1 1 0 0 1 1 1 0 0 2 0 0 15 1 1 2 1632.9311 P0A7B3 P0A7B3 141 155 nadK NAD kinase yes yes 3 0.00052299 53.565 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 34885000 13395000 10181000 0 0 5813900 5495300 0 0 3783 99 4166 22615;22616;22617;22618 17007;17008 17007 2 13395000 10421000 0 0 7013300 6087600 0 0 RISTVPEAVEMQSR YPNKVEMKRLQELAKRISTVPEAVEMQSRV KRISTVPEAVEMQSRVAKIYGDRQAMAAGE K R I S R V 1 2 0 0 0 1 2 0 0 1 0 0 1 0 1 2 1 0 0 2 0 0 14 1 2 2 1601.8195 P0AFG3 P0AFG3 560 573 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3 2.3167E-12 105.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37912000 15005000 15909000 0 0 3445300 3552800 0 0 3784 246 4167 22619;22620;22621;22622 17009;17010;17011 17009 3 15005000 16284000 0 0 4156100 3935700 0 0 RITARHIR FDIEANGKVYVEKGRRITARHIRQLEKDDV VYVEKGRRITARHIRQLEKDDVKLIEVPVE R R I I R Q 1 3 0 0 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 8 2 0 1 1021.6257 P0A8V2 P0A8V2 268 275 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.0032179 30.185 By MS/MS 1 0 0 0 0 0 0 0 0 0 3785 154 4168 22623 17012 17012 50 0 0 0 0 0 0 0 0 0 RITSVDTPLGGDSE DKPVDDVSRMLRLNERITSVDTPLGGDSEK ERITSVDTPLGGDSEKALLDILADEKENGP E R I S E K 0 1 0 2 0 0 1 2 0 1 1 0 0 0 1 2 2 0 0 1 0 0 14 1 0 1 1445.6998 P13445 P13445 218 231 rpoS RNA polymerase sigma factor RpoS yes yes 2 1.4302E-19 119.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 1 1 79157000 7162400 4577700 12910000 13451000 0 0 17204000 23852000 3786 279 4169 22624;22625;22626;22627;22628;22629;22630;22631 17013;17014;17015;17016;17017;17018;17019 17018 7 110050000 69811000 109690000 101980000 0 0 132400000 136880000 RIVQVPFAELVK LFFPDPWHKARHNKRRIVQVPFAELVKSKL NKRRIVQVPFAELVKSKLQLGGVFHMATDW R R I V K S 1 1 0 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 0 3 0 0 12 1 1 2 1397.8395 P0A8I5 P0A8I5 155 166 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2;3 3.4476E-08 125.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 93739000 27980000 23455000 0 0 19912000 22391000 0 0 3787 144 4170 22632;22633;22634;22635;22636;22637;22638;22639 17020;17021;17022;17023;17024;17025;17026;17027 17026 8 27980000 24009000 0 0 24020000 24804000 0 0 RIYGVLER LSDYGVQLREKQKVRRIYGVLERQFRNYYK REKQKVRRIYGVLERQFRNYYKEAARLKGN R R I E R Q 0 2 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 8 1 1 0 1004.5767 P0A7V8 P0A7V8 63 70 rpsD 30S ribosomal protein S4 yes yes 2 1.2593E-17 139.97 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 344320000 100030000 93087000 0 0 66458000 84747000 0 0 3788 130 4171 22640;22641;22642;22643;22644 17028;17029;17030;17031 17029 4 100030000 95284000 0 0 80562000 93880000 0 0 RKGALDLAGLPGK ARAREAARRAREMTRRKGALDLAGLPGKLA TRRKGALDLAGLPGKLADCQERDPALSELY R R K G K L 2 1 0 1 0 0 0 3 0 0 3 2 0 0 1 0 0 0 0 0 0 0 13 2 0 3 1294.7721 P0AES6 P0AES6 394 406 gyrB DNA gyrase subunit B yes yes 3 0.0075131 40.066 By MS/MS By matching By matching By matching 1 1 1 1 13681000 6559800 3580500 0 0 1763300 1777000 0 0 3789 239 4172 22645;22646;22647;22648 17032 17032 1 6559800 3665000 0 0 2127100 1968500 0 0 RKGEMVLIVEGHK PVGELLAWVKEDENRRKGEMVLIVEGHKAQ NRRKGEMVLIVEGHKAQEEDLPADALRTLA R R K H K A 0 1 0 0 0 0 2 2 1 1 1 2 1 0 0 0 0 0 0 2 0 0 13 2 2 0 1494.8341 P67087 P67087 224 236 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 4 0.022363 18.413 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33872000 8814300 8299500 0 0 5945500 10813000 0 0 3790 400 4173 22649;22650;22651;22652 17033;17034;17035 17034 1 8814300 8495400 0 0 7172100 11978000 0 0 RKGYSPTHREEE ETGGKRHESSSEKKERKGYSPTHREEEYGK KKERKGYSPTHREEEYGKNHHNSSKKEKNK E R K E E Y 0 2 0 0 0 0 3 1 1 0 0 1 0 0 1 1 1 0 1 0 0 0 12 3 2 1 1487.7117 CON__P20930 CON__P20930 161 172 yes yes 4 0.018608 19.099 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 32345000 2073000 2139800 2134500 5702100 1737900 2353200 6219300 9985300 + 3791 14 4174 22653;22654;22655;22656;22657;22658;22659;22660;22661 17036 17036 1 31093000 32632000 18136000 43230000 26756000 35667000 47865000 57304000 RKNNQHDVAIVR VMCSGKVYYDLLEQRRKNNQHDVAIVRIEQ EQRRKNNQHDVAIVRIEQLYPFPHKAMQEV R R K V R I 1 2 2 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 12 2 0 1 1448.796 P0AFG3 P0AFG3 833 844 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 4 0.021801 16.773 By MS/MS 1 3245400 3245400 0 0 0 0 0 0 0 3792 246 4175 22662 17037 17037 1 3245400 0 0 0 0 0 0 0 RKRAADNKSLGQFNLDGINPAPRGMPQIE EDNQSAVTIHVLQGERKRAADNKSLGQFNL LDGINPAPRGMPQIEVTFDIDADGILHVSA E R K I E V 3 3 3 2 0 2 1 3 0 2 2 2 1 1 3 1 0 0 0 0 0 0 29 5 0 6 3192.6574 P0A6Y8 P0A6Y8 445 473 dnaK Chaperone protein DnaK yes yes 5 0.021613 10.422 By MS/MS 1 5029200 0 0 0 0 0 0 0 5029200 3793 86 4176 22663 17038 17038 1 0 0 0 0 0 0 0 28862000 RKYGCYVNPSLISQLKSLE KRERIQLISSGGTLERKYGCYVNPSLISQL CYVNPSLISQLKSLEIDLFIFSCEGIDSSG E R K L E I 0 1 1 0 1 1 1 1 0 1 3 2 0 0 1 3 0 0 2 1 0 0 19 3 0 1 2254.178 P0ACK8 P0ACK8 147 165 fucR L-fucose operon activator yes yes 6 0.022115 8.5004 By MS/MS By MS/MS 1 1 2709700 0 0 0 0 569970 2139700 0 0 3794 214 4177 22664;22665 17039 17039 1 0 0 0 0 8775200 32430000 0 0 RLAQHPYDR ______________________________ ATTLGKRLAQHPYDRAVILNAGIKVSGDRH K R L D R A 1 2 0 1 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 9 1 0 2 1154.5945 P15038 P15038 11 19 helD Helicase IV yes yes 3 0.0039018 46.457 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22318000 8891500 7692400 0 0 2738500 2995500 0 0 3795 281 4178 22666;22667;22668;22669 17040;17041;17042;17043 17040 4 8891500 7874000 0 0 3303400 3318300 0 0 RLDNLNAA GLQFTLFRPFNWMGPRLDNLNAARIGSSRA PFNWMGPRLDNLNAARIGSSRAITQLILNL P R L A A R 2 1 2 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 8 1 0 1 885.46683 P77398 P77398 497 504 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.017518 54.205 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 186470000 20815000 20962000 0 0 58499000 86195000 0 0 3796 432 4179 22670;22671;22672;22673 17044;17045 17044 2 125650000 125460000 0 0 83285000 122870000 0 0 RLDNLNAARIGSSRA GLQFTLFRPFNWMGPRLDNLNAARIGSSRA RLDNLNAARIGSSRAITQLILNLVEGSPIK P R L R A I 3 3 2 1 0 0 0 1 0 1 2 0 0 0 0 2 0 0 0 0 0 0 15 3 0 2 1612.8757 P77398 P77398 497 511 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4 7.9459E-22 114.01 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 752820000 36838000 38692000 0 0 472060000 205240000 0 0 3797 432 4180 22674;22675;22676;22677;22678;22679;22680;22681;22682 17046;17047;17048 17046 2 253030000 303420000 0 0 672060000 321250000 0 0 RLESGYLYLGSPVK DDVMIGAGSLVPQNKRLESGYLYLGSPVKQ KRLESGYLYLGSPVKQIRPLSDEEKAGLRY K R L V K Q 0 1 0 0 0 0 1 2 0 0 3 1 0 0 1 2 0 0 2 1 0 0 14 1 1 1 1580.8562 P0A9W9 P0A9W9 135 148 yrdA Protein YrdA yes yes 2;3 1.1325E-30 142.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 200130000 55326000 21046000 0 0 54702000 69061000 0 0 3798 179 4181 22683;22684;22685;22686;22687;22688;22689;22690 17049;17050;17051;17052;17053;17054;17055;17056 17051 7 55326000 21542000 0 0 65987000 76504000 0 0 RLFQYLYR GYKATSSARLLSAVRRLFQYLYREKFREDD RLLSAVRRLFQYLYREKFREDDPSAHLASP R R L Y R E 0 2 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 8 1 0 0 1157.6346 P0A8P8 P0A8P8 81 88 xerD Tyrosine recombinase XerD yes yes 2 3.8759E-36 162.51 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 96169000 24099000 19235000 0 0 23248000 29587000 0 0 3799 151 4182 22691;22692;22693;22694 17057;17058;17059;17060 17059 4 24099000 19689000 0 0 28044000 32776000 0 0 RLGDAKPAGEQQR GAKSASAKPAEKPSRRLGDAKPAGEQQRRR SRRLGDAKPAGEQQRRRRPRKPAAAQ____ R R L Q R R 2 2 0 1 0 2 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 13 2 1 3 1424.7484 P25888 P25888 431 443 rhlE ATP-dependent RNA helicase RhlE yes yes 3 1.8598E-10 110.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71925000 27964000 31758000 0 0 6256900 5946900 0 0 3800 318 4183 22695;22696;22697;22698 17061;17062;17063;17064;17065 17061 5 27964000 32507000 0 0 7547800 6587800 0 0 RLHSFELA ADEIMVNGQIFDHQARLHSFELAMDVKEEL QIFDHQARLHSFELAMDVKEELLG______ A R L L A M 1 1 0 0 0 0 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 0 8 1 1 0 971.51886 P0ADV5 P0ADV5 319 326 yhbW Uncharacterized protein YhbW yes yes 2 0.0058093 91.906 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 136680000 6824800 6830400 0 0 74082000 48939000 0 0 3801 226 4184 22699;22700;22701;22702 17066;17067 17066 2 41198000 40880000 0 0 105470000 69762000 0 0 RLIDMGEEIGLATVYR QEPDNHHVSAEDLYKRLIDMGEEIGLATVY LIDMGEEIGLATVYRVLNQFDDAGIVTRHN K R L Y R V 1 2 0 1 0 0 2 2 0 2 2 0 1 0 0 0 1 0 1 1 0 0 16 1 2 1 1834.9611 P0A9A9 P0A9A9 42 57 fur Ferric uptake regulation protein yes yes 3 6.8519E-16 90.754 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 31984000 7825100 7254700 0 0 7687700 9216700 0 0 3802 162 4185 22703;22704;22705;22706;22707;22708;22709 17068;17069;17070;17071;17072 17070 5 7825100 7426000 0 0 9273700 10210000 0 0 RLKILEVLQEP NNTALKKAGLKVTLPRLKILEVLQEPDNHH VTLPRLKILEVLQEPDNHHVSAEDLYKRLI P R L E P D 0 1 0 0 0 1 2 0 0 1 3 1 0 0 1 0 0 0 0 1 0 0 11 2 2 0 1336.8078 P0A9A9 P0A9A9 19 29 fur Ferric uptake regulation protein yes yes 2 0.0059162 68.735 By MS/MS By MS/MS 1 1 6760800 0 0 0 0 2940500 3820300 0 0 3803 162 4186 22710;22711 17073 17073 1 0 0 0 0 4186400 5445800 0 0 RLKNARLDDTSSE DAMAKGLEQLKVIRERLKNARLDDTSSEFN RERLKNARLDDTSSEFNTQRVECLELDNLM E R L S E F 1 2 1 2 0 0 1 0 0 0 2 1 0 0 0 2 1 0 0 0 0 0 13 3 0 1 1503.7641 P0AC41 P0AC41 493 505 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 8.4418E-11 76.655 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 486470000 42622000 49027000 57683000 69677000 13900000 20729000 113400000 119430000 3804 203 4187 22712;22713;22714;22715;22716;22717;22718;22719 17074;17075;17076;17077;17078;17079 17078 6 654880000 747660000 490130000 528260000 214000000 314170000 872750000 685420000 RLKNARLDDTSSEFNTQRVE DAMAKGLEQLKVIRERLKNARLDDTSSEFN RLDDTSSEFNTQRVECLELDNLMETAYATA E R L V E C 1 3 2 2 0 1 2 0 0 0 2 1 0 1 0 2 2 0 0 1 0 0 20 4 1 1 2378.1938 P0AC41 P0AC41 493 512 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 4 0.0021505 26.344 By MS/MS By MS/MS 1 1 18580000 0 0 0 7791400 0 0 10788000 0 3805 203 4188 22720;22721 17080;17081 17081 1 0 0 0 59071000 0 0 83030000 0 RLLLDEKSASNENFRDQLA EPWIDLRATLCILDPRLLLDEKSASNENFR DEKSASNENFRDQLAAADIIVANKSDRTTP P R L L A A 2 2 2 2 0 1 2 0 0 0 4 1 0 1 0 2 0 0 0 0 0 0 19 3 2 1 2218.1342 P33030 P33030 126 144 yeiR Uncharacterized protein YeiR yes yes 3 0.0015367 30.767 By matching By matching By MS/MS By MS/MS 1 1 1 1 19832000 10406000 5880500 0 0 1809000 1736600 0 0 3806 343 4189 22722;22723;22724;22725 17082 17082 0 10406000 6019300 0 0 2575400 2475600 0 0 RLLNFLESR AVDFPPERILNVSPRRLLNFLESRGMAPIA LNVSPRRLLNFLESRGMAPIAEFADL____ R R L S R G 0 2 1 0 0 0 1 0 0 0 3 0 0 1 0 1 0 0 0 0 0 0 9 1 1 0 1146.6509 P75914 P75914 226 234 ycdX Probable phosphatase YcdX yes yes 2;3 8.7444E-07 126.41 By MS/MS By MS/MS By MS/MS 3 2 2 74206000 32915000 23912000 0 0 0 17379000 0 0 3807 412 4190 22726;22727;22728;22729;22730;22731;22732 17083;17084;17085;17086;17087 17083 5 32915000 24476000 0 0 0 19252000 0 0 RLLQAPLIDQPLE LPQRLPKDLSEAQVERLLQAPLIDQPLELR VERLLQAPLIDQPLELRDKAMLEVLYATGL E R L L E L 1 1 0 1 0 2 1 0 0 1 4 0 0 0 2 0 0 0 0 0 0 0 13 1 0 3 1504.8613 P0A8P8 P0A8P8 120 132 xerD Tyrosine recombinase XerD yes yes 2 1.1456E-05 72.79 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14536000 1720000 0 1881000 3063900 0 3921500 2359700 1590200 3808 151 4191 22733;22734;22735;22736;22737;22738 17088;17089;17090;17091;17092 17092 5 26427000 0 15983000 23229000 0 59436000 18160000 9126100 RLLQAPLIDQPLELRDKAMLE LPQRLPKDLSEAQVERLLQAPLIDQPLELR LIDQPLELRDKAMLEVLYATGLRVSELVGL E R L L E V 2 2 0 2 0 2 2 0 0 1 6 1 1 0 2 0 0 0 0 0 0 0 21 3 1 4 2461.3727 P0A8P8 P0A8P8 120 140 xerD Tyrosine recombinase XerD yes yes 4 5.4221E-07 58.158 By MS/MS By MS/MS 1 1 7849700 0 0 0 0 3126200 4723500 0 0 3809 151 4192 22739;22740 17093;17094 17094 2 0 0 0 0 48131000 71592000 0 0 RLLREDHYE LILGVNGFIGNHLTERLLREDHYEVYGLDI GNHLTERLLREDHYEVYGLDIGSDAISRFL E R L Y E V 0 2 0 1 0 0 2 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 9 2 1 0 1229.6153 P77398 P77398 334 342 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.0081962 47.198 By MS/MS By MS/MS By MS/MS 1 1 1 30328000 0 0 0 3586500 10284000 16457000 0 0 3810 432 4193 22741;22742;22743 17095;17096;17097 17096 2 0 0 0 27191000 158330000 249430000 0 0 RLNSWLR EVEKRVTASVGSWIKRLNSWLRKEF_____ ASVGSWIKRLNSWLRKEF____________ K R L L R K 0 2 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 7 1 0 0 943.53518 P0ABH0 P0ABH0 411 417 ftsA Cell division protein FtsA yes yes 2 0.0025753 80.229 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 49268000 13185000 20368000 0 1438400 6643900 7633400 0 0 3811 199 4194 22744;22745;22746;22747;22748 17098;17099;17100;17101 17101 4 13185000 20849000 0 10905000 8014500 8456100 0 0 RLPELMSLLR RDVAGYAAGLELFDRRLPELMSLLRDDDIL ELFDRRLPELMSLLRDDDILILTADHGCDP R R L L R D 0 2 0 0 0 0 1 0 0 0 4 0 1 0 1 1 0 0 0 0 0 0 10 1 1 1 1226.7169 P0A6K6 P0A6K6 328 337 deoB Phosphopentomutase yes yes 2 0.0014305 69.276 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25905000 6888400 7375200 0 0 4161000 7480700 0 0 3812 75 4195 22749;22750;22751;22752 17102;17103;17104;17105 17103 4 6888400 7549300 0 0 5019500 8286900 0 0 RLQALLGRMEEV RENNHLKEQQNGWQERLQALLGRMEEV___ WQERLQALLGRMEEV_______________ E R L E V - 1 2 0 0 0 1 2 1 0 0 3 0 1 0 0 0 0 0 0 1 0 0 12 2 2 1 1413.7762 P0AF36 P0AF36 70 81 zapB Cell division protein ZapB yes yes 2;3 2.3424E-10 99.5 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 1 3 3 1 2 217560000 15457000 16469000 6028200 6063700 68765000 70419000 17505000 16857000 3813 242 4196;4197 22753;22754;22755;22756;22757;22758;22759;22760;22761;22762;22763;22764;22765;22766;22767;22768;22769 17106;17107;17108;17109;17110;17111;17112;17113;17114;17115;17116;17117 17114 214 11 237490000 251160000 51221000 45973000 1058700000 1067300000 134720000 96741000 RLQELAK NHEWDEEYPNKVEMKRLQELAKRISTVPEA YPNKVEMKRLQELAKRISTVPEAVEMQSRV K R L A K R 1 1 0 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 7 1 1 1 856.51305 P0AFG3 P0AFG3 553 559 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 5.8951E-07 88.029 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 47676000 17661000 18755000 0 0 5825900 5433800 0 0 3814 246 4198 22770;22771;22772;22773 17118;17119;17120;17121 17119 2 17661000 19198000 0 0 7027800 6019400 0 0 RLQVTSEK VNPDILMRLSAQMARRLQVTSEKVGNLAFL LSAQMARRLQVTSEKVGNLAFLDVTGRIAQ R R L E K V 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 8 1 1 0 959.53999 P0ACJ8 P0ACJ8 124 131 crp cAMP-activated global transcriptional regulator CRP yes yes 2 1.8194E-45 164.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3417700000 1269600000 1364400000 0 0 501170000 282560000 0 0 3815 213 4199 22774;22775;22776;22777 17122;17123;17124;17125;17126;17127;17128;17129;17130;17131 17122 10 1269600000 1396600000 0 0 604560000 313020000 0 0 RLVQQFADAGIRKSADDSVSAQE VTIKTLAAERQTSVERLVQQFADAGIRKSA AGIRKSADDSVSAQEKQTLIDHLNQKNSGP E R L Q E K 4 2 0 3 0 3 1 1 0 1 1 1 0 1 0 3 0 0 0 2 0 0 23 3 0 4 2490.2463 P0A705 P0A705 19 41 infB Translation initiation factor IF-2 yes yes 3;4 0.00024482 38.26 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 63232000 0 0 12711000 22219000 0 0 6911000 21392000 3816 90 4200 22778;22779;22780;22781;22782;22783;22784;22785 17132;17133;17134;17135;17136 17136 5 0 0 108000000 168460000 0 0 53188000 122760000 RLVVNEHGR LEGQLGVQLFDRVGKRLVVNEHGRLLYPRA FDRVGKRLVVNEHGRLLYPRALALLEQAVE K R L G R L 0 2 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 2 0 0 9 1 1 0 1078.5996 P0ACR4 P0ACR4 56 64 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 3 1.9653E-12 103.8 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 112520000 51928000 40667000 0 0 10083000 9845600 0 0 3817 218 4201 22786;22787;22788;22789;22790 17137;17138;17139;17140 17138 3 51928000 41627000 0 0 12164000 10931000 0 0 RMDDLLQGFVAQHR EFGPYKINGDKEIMRRMDDLLQGFVAQHRM RRMDDLLQGFVAQHRMKLPGSAYIPCYEIC R R M H R M 1 2 0 2 0 2 0 1 1 0 2 0 1 1 0 0 0 0 0 1 0 0 14 1 0 1 1684.8468 P0ADR8 P0ADR8 425 438 ygdH LOG family protein YgdH yes yes 3 0.018837 23.456 By matching By MS/MS By matching By matching 1 1 1 1 18022000 6963600 5660400 0 0 2807100 2591400 0 0 3818 225 4202 22791;22792;22793;22794 17141 17141 1 6963600 5794000 0 0 3386200 2870700 0 0 RMFAAVGNHVVELHR QVRLTISEGRYHQVKRMFAAVGNHVVELHR RMFAAVGNHVVELHRERIGGITLDADLAPG K R M H R E 2 2 1 0 0 0 1 1 2 0 1 0 1 1 0 0 0 0 0 3 0 0 15 1 1 2 1734.91 P0AA43 P0AA43 188 202 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4 9.8558E-64 165.64 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 205880000 64758000 60673000 0 0 39054000 41400000 0 0 3819 183 4203;4204 22795;22796;22797;22798;22799;22800;22801;22802;22803 17142;17143;17144;17145;17146;17147;17148;17149 17147 175 8 64758000 62105000 0 0 47111000 45862000 0 0 RMSIGEAK EETGLTIEQVKDINRRMSIGEAKARRAKKE QVKDINRRMSIGEAKARRAKKEMVEANLRL R R M A K A 1 1 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 8 1 1 1 890.46439 P00579 P00579 364 371 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.011351 52.482 By MS/MS By MS/MS 2 2 15430000 7764800 7665100 0 0 0 0 0 0 3820 27 4205 22804;22805;22806;22807 17150;17151 17150 2 17507000 19101000 0 0 0 0 0 0 RMTGDNPDAPR VQDPTMQRRTMATFRRMTGDNPDAPRWLSY ATFRRMTGDNPDAPRWLSYPGFVPQLGNNA R R M P R W 1 2 1 2 0 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 0 0 11 1 0 3 1228.5619 P34209 P34209 165 175 ydcF Protein YdcF yes yes 3 0.0007873 57.019 By MS/MS By MS/MS By MS/MS 1 1 1 5180100 2367500 2365000 0 0 447600 0 0 0 3821 347 4206 22808;22809;22810 17152;17153 17152 2 2367500 2420800 0 0 539950 0 0 0 RNLAELPASAAHSHQHVVK SEHGKVDGHLLDLPRRNLAELPASAAHSHQ ELPASAAHSHQHVVKKGLAALSLPEHQRWR R R N V K K 4 1 1 0 0 1 1 0 3 0 2 1 0 0 1 2 0 0 0 2 0 0 19 1 1 5 2064.0977 P33030 P33030 196 214 yeiR Uncharacterized protein YeiR yes yes 4;5 0.0024115 32.121 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 65695000 14672000 27377000 0 0 10878000 12768000 0 0 3822 343 4207 22811;22812;22813;22814;22815;22816;22817;22818 17154;17155;17156;17157;17158 17155 5 14672000 28023000 0 0 13122000 14144000 0 0 RNLAKSVTVE AYHVALIKGTDVDQPRNLAKSVTVE_____ DVDQPRNLAKSVTVE_______________ P R N V E - 1 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 10 2 0 1 1115.6299 P17169 P17169 600 609 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.013252 56.432 By MS/MS By MS/MS By MS/MS 1 1 1 8639700 2291200 2002600 0 0 0 4345900 0 0 3823 288 4208 22819;22820;22821 17159 17159 1 13831000 11985000 0 0 0 6195100 0 0 RNLLLVKGAVPGATGSDLIVKPAVKA RVTVQSLDVVRVDAERNLLLVKGAVPGATG GATGSDLIVKPAVKA_______________ E R N K A - 4 1 1 1 0 0 0 3 0 1 4 3 0 0 2 1 1 0 0 4 0 0 26 4 0 5 2586.5585 P60438 P60438 184 209 rplC 50S ribosomal protein L3 yes yes 4;5 3.42E-15 80.683 By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 90773000 0 0 3604400 3748700 37602000 31706000 0 14112000 3824 380 4209 22822;22823;22824;22825;22826;22827;22828 17160;17161;17162;17163;17164;17165;17166 17160 7 0 0 30626000 28421000 578910000 480550000 0 80988000 RNRMGEIIIDAKCE IGLLPNTNWLEGAVERNRMGEIIIDAKCET ERNRMGEIIIDAKCETNVKGVFAAGDCTTV E R N C E T 1 2 1 1 1 0 2 1 0 3 0 1 1 0 0 0 0 0 0 0 0 0 14 3 1 1 1703.8447 P35340 P35340 464 477 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3 6.027E-06 68.83 By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 34643000 5901400 4997500 4259100 0 12343000 7142800 0 0 3825 348 4210 22829;22830;22831;22832;22833;22834 17167;17168;17169 17168 3 90673000 76213000 36189000 0 170300000 108260000 0 0 RNSLMITLSQSGETADTLAGLR VEIASEFRYRKSAVRRNSLMITLSQSGETA LSQSGETADTLAGLRLSKELGYLGSLAICN R R N L R L 2 2 1 1 0 1 1 2 0 1 4 0 1 0 0 3 3 0 0 0 0 0 22 1 1 2 2333.2009 P17169 P17169 340 361 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 5.2202E-73 122.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54930000 8320400 9558200 0 0 16885000 20166000 0 0 3826 288 4211 22835;22836;22837;22838 17170;17171;17172;17173 17172 4 8320400 9783800 0 0 20368000 22340000 0 0 RNTASDQVTQHVHFVDK AEKLLHNPLEIEVARRNTASDQVTQHVHFV TASDQVTQHVHFVDKKRKRELLSHMIGKGN R R N D K K 1 1 1 2 0 2 0 0 2 0 0 1 0 1 0 1 2 0 0 3 0 0 17 1 0 1 1980.9766 P25888 P25888 213 229 rhlE ATP-dependent RNA helicase RhlE yes yes 3;4 3.1122E-11 84.653 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 192050000 45459000 51494000 0 0 44592000 50509000 0 0 3827 318 4212 22839;22840;22841;22842;22843;22844;22845;22846 17174;17175;17176;17177;17178 17177 4 45459000 52709000 0 0 53792000 55953000 0 0 RNTASDQVTQHVHFVDKK AEKLLHNPLEIEVARRNTASDQVTQHVHFV ASDQVTQHVHFVDKKRKRELLSHMIGKGNW R R N K K R 1 1 1 2 0 2 0 0 2 0 0 2 0 1 0 1 2 0 0 3 0 0 18 2 0 1 2109.0715 P25888 P25888 213 230 rhlE ATP-dependent RNA helicase RhlE yes yes 4 1.4402E-05 64.83 By MS/MS By MS/MS By MS/MS 1 1 1 39187000 11143000 15271000 0 0 12774000 0 0 0 3828 318 4213 22847;22848;22849 17179;17180;17181 17179 3 11143000 15631000 0 0 15409000 0 0 0 RPAMFVLENVK QGTLFFDVVRIIDARRPAMFVLENVKNLKS IDARRPAMFVLENVKNLKSHDQGKTFRIIM R R P V K N 1 1 1 0 0 0 1 0 0 0 1 1 1 1 1 0 0 0 0 2 0 0 11 1 1 2 1302.7118 P0AED9 P0AED9 217 227 dcm DNA-cytosine methyltransferase yes yes 2;3 5.4603E-08 109.66 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 562910000 127200000 160540000 0 0 125220000 149960000 0 0 3829 235 4214;4215 22850;22851;22852;22853;22854;22855;22856;22857;22858;22859;22860;22861;22862;22863;22864;22865 17182;17183;17184;17185;17186;17187;17188;17189;17190;17191;17192;17193;17194;17195 17187 210 14 127200000 164330000 0 0 151050000 166130000 0 0 RPDGSVIR DVLKAVVVRTKKGVRRPDGSVIRFDGNACV RTKKGVRRPDGSVIRFDGNACVLLNNNSEQ R R P I R F 0 2 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 8 1 0 1 898.49846 P0ADY3 P0ADY3 71 78 rplN 50S ribosomal protein L14 yes yes 2 2.2016E-07 119.41 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2475100000 775730000 830250000 0 0 400510000 468660000 0 0 3830 228 4216 22866;22867;22868;22869;22870;22871;22872 17196;17197;17198;17199;17200 17200 5 784400000 858940000 0 0 493730000 519170000 0 0 RPEITLVTNK ELRVTVVATGIGMDKRPEITLVTNKQVQQP IGMDKRPEITLVTNKQVQQPVMDRYQQHGM K R P N K Q 0 1 1 0 0 0 1 0 0 1 1 1 0 0 1 0 2 0 0 1 0 0 10 1 1 1 1169.6768 P0A9A6 P0A9A6 320 329 ftsZ Cell division protein FtsZ yes yes 2 0.00034699 88.948 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27356000 6925600 6279300 0 0 6518900 7632600 0 0 3831 161 4217 22873;22874;22875;22876 17201;17202;17203;17204;17205 17204 4 6925600 6427500 0 0 7863800 8455200 0 0 RPELLENLALTEEQAR RRWRLKQSLGRTWLRRPELLENLALTEEQA PELLENLALTEEQARLLAEFKTEHAQQQHK R R P A R L 2 2 1 0 0 1 4 0 0 0 4 0 0 0 1 0 1 0 0 0 0 0 16 1 4 3 1880.9956 P0A873 P0A873 220 235 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2;3 2.9812E-46 153.23 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 672500000 174430000 140470000 0 0 152580000 205020000 0 0 3832 140 4218 22877;22878;22879;22880;22881;22882;22883;22884 17206;17207;17208;17209;17210;17211;17212;17213 17213 8 174430000 143780000 0 0 184060000 227120000 0 0 RPLVVMSPK QVYHMLRRQALRGMRRPLVVMSPKSLLRHP ALRGMRRPLVVMSPKSLLRHPLAVSSLEEL R R P P K S 0 1 0 0 0 0 0 0 0 0 1 1 1 0 2 1 0 0 0 2 0 0 9 1 0 2 1025.6056 P0AFG3 P0AFG3 771 779 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0033532 64.485 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 244770000 68055000 80693000 0 0 49139000 46883000 0 0 3833 246 4219 22885;22886;22887;22888 17214;17215;17216;17217 17214 4 68055000 82598000 0 0 59277000 51936000 0 0 RQDIESNLQYDAGDK RRSVNIFDKTGAEVKRQDIESNLQYDAGDK RQDIESNLQYDAGDKGIYRHYMQKEIYEQP K R Q D K G 1 1 1 3 0 2 1 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 15 1 1 1 1750.8122 P17169 P17169 232 246 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 5.6374E-301 266.35 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 6296800000 2083600000 1498900000 0 0 1315500000 1398800000 0 0 3834 288 4220 22889;22890;22891;22892;22893;22894;22895;22896 17218;17219;17220;17221;17222;17223;17224;17225;17226 17220 9 2083600000 1534300000 0 0 1586900000 1549600000 0 0 RQDIESNLQYDAGDKGIYR RRSVNIFDKTGAEVKRQDIESNLQYDAGDK ESNLQYDAGDKGIYRHYMQKEIYEQPNAIK K R Q Y R H 1 2 1 3 0 2 1 2 0 2 1 1 0 0 0 1 0 0 2 0 0 0 19 2 1 1 2240.0822 P17169 P17169 232 250 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3;4 0 311.87 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 2595400000 884080000 811330000 0 0 424700000 475270000 0 0 3835 288 4221 22897;22898;22899;22900;22901;22902;22903;22904;22905;22906;22907;22908 17227;17228;17229;17230;17231;17232;17233;17234;17235;17236;17237;17238;17239 17229 12 884080000 830480000 0 0 512320000 526490000 0 0 RQFRNYYKE LREKQKVRRIYGVLERQFRNYYKEAARLKG IYGVLERQFRNYYKEAARLKGNTGENLLAL E R Q K E A 0 2 1 0 0 1 1 0 0 0 0 1 0 1 0 0 0 0 2 0 0 0 9 3 0 0 1302.6469 P0A7V8 P0A7V8 70 78 rpsD 30S ribosomal protein S4 yes yes 3 0.010975 41.448 By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 33779000 3327300 0 0 0 3254700 4456800 9940400 12799000 3836 130 4222 22909;22910;22911;22912;22913 17240 17240 0 51123000 0 0 0 50109000 67550000 76503000 73454000 RQLLEQTLP DDIAITLHHKLCHAARQLLEQTLPAIKHGN KLCHAARQLLEQTLPAIKHGNILEIAQREN A R Q L P A 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 1 0 0 0 0 0 9 1 1 0 1096.6241 P77398 P77398 170 178 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.011988 74.127 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2730700000 147870000 155720000 0 0 1420600000 1006500000 0 0 3837 432 4223 22914;22915;22916;22917;22918 17241;17242;17243;17244 17244 4 870990000 931980000 0 0 2022500000 1434800000 0 0 RQMHVWTSST DPDHRPDIVYVHQVARQMHVWTSST_____ VHQVARQMHVWTSST_______________ A R Q S T - 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 10 1 0 0 1231.5768 GST-Nek6 GST-Nek6 535 544 yes yes 3 0.0037466 52.79 By MS/MS By MS/MS 1 2 58109000 0 0 0 0 34530000 23579000 0 0 3838 23 4224 22919;22920;22921 17245;17246 17245 2 0 0 0 0 49160000 33252000 0 0 RRERRDDFANE HAVTEASPMVKAKDERRERRDDFANETADD AKDERRERRDDFANETADDAEAGDSEEEEE E R R N E T 1 4 1 2 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 11 4 1 1 1462.7025 P02358 P02358 109 119 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 3;4 0.020185 24.291 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 21018000 1044500 1317300 0 0 660950 0 3113200 14882000 3839 35 4225 22922;22923;22924;22925;22926;22927 17247;17248 17247 2 16048000 20089000 0 0 10176000 0 23960000 85407000 RRGEDIIDFSMGNPDGATPPHIVEK PYVFNITAELKMAARRRGEDIIDFSMGNPD MGNPDGATPPHIVEKLCTVAQRPDTHGYST R R R E K L 1 2 1 3 0 0 2 3 1 3 0 1 1 1 3 1 1 0 0 1 0 0 25 2 2 4 2750.3446 P77434 P77434 33 57 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 4;5 6.8388E-19 89.197 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 117220000 38234000 35382000 0 0 20046000 23561000 0 0 3840 433 4226 22928;22929;22930;22931;22932;22933;22934;22935 17249;17250;17251;17252;17253;17254;17255;17256 17249 8 38234000 36217000 0 0 24182000 26100000 0 0 RRTELDIEK RDGILRVKAEMENLRRRTELDIEKAHKFAL EMENLRRRTELDIEKAHKFALEKFINELLP R R R E K A 0 2 0 1 0 0 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 9 2 2 0 1158.6357 P09372 P09372 74 82 grpE Protein GrpE yes yes 3 0.0046268 30.564 By MS/MS 1 0 0 0 0 0 0 0 0 0 3841 62 4227 22936 17257 17257 1 0 0 0 0 0 0 0 0 RSAWVRAKTACE GDFIGELGLFEEGQERSAWVRAKTACEVAE GQERSAWVRAKTACEVAEISYKKFRQLIQV E R S C E V 3 2 0 0 1 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 12 3 0 3 1433.7198 P0ACJ8 P0ACJ8 83 94 crp cAMP-activated global transcriptional regulator CRP yes yes 3 0.0034975 56.936 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 167100000 30632000 35126000 23836000 0 9151500 10132000 28877000 29347000 3842 213 4228 22937;22938;22939;22940;22941;22942;22943 17258;17259;17260;17261 17259 4 470640000 535680000 202530000 0 140900000 153570000 222250000 168420000 RSDLSADINE VDAGKMEGTFKRKPERSDLSADINEHLIVE KRKPERSDLSADINEHLIVELYSK______ E R S N E H 1 1 1 2 0 0 1 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 10 1 0 1 1118.5204 P0A7V8 P0A7V8 188 197 rpsD 30S ribosomal protein S4 yes yes 2 3.7369E-26 141.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1250600000 165210000 122110000 140590000 150920000 132360000 86824000 186570000 266000000 3843 130 4229 22944;22945;22946;22947;22948;22949;22950;22951 17262;17263;17264;17265;17266 17263 4 2538400000 1862200000 1194500000 1144200000 2037800000 1315900000 1435900000 1526500000 RSFESDAEAK VEIPIDAPGIDALLRRSFESDAEAKLVHDL DALLRRSFESDAEAKLVHDLREDGFLTLGL R R S A K L 2 1 0 1 0 0 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 10 1 2 2 1138.5255 P63417 P63417 20 29 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 2 0.00060328 80.755 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 58226000 22436000 16998000 0 0 8093200 10698000 0 0 3844 394 4230 22952;22953;22954;22955 17267;17268;17269 17267 3 22436000 17399000 0 0 9762900 11851000 0 0 RSHDALTAVTSLSVDK AVQQNKPTRSKRGMRRSHDALTAVTSLSVD SHDALTAVTSLSVDKTSGEKHLRHHITADG R R S D K T 2 1 0 2 0 0 0 0 1 0 2 1 0 0 0 3 2 0 0 2 0 0 16 1 0 2 1698.8901 P0A7N4 P0A7N4 17 32 rpmF 50S ribosomal protein L32 yes yes 3 9.1304E-11 70.235 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62722000 21520000 15642000 0 0 10569000 14991000 0 0 3845 116 4231 22956;22957;22958;22959 17270;17271;17272;17273 17271 4 21520000 16011000 0 0 12749000 16607000 0 0 RSKTLSVKIPAGVDTGDRIRLAGEGE IKDPCNKCHGHGRVERSKTLSVKIPAGVDT GVDTGDRIRLAGEGEAGEHGAPAGDLYVQV E R S G E A 2 3 0 2 0 0 2 4 0 2 2 2 0 0 1 2 2 0 0 2 0 0 26 5 1 3 2724.4882 P08622 P08622 208 233 dnaJ Chaperone protein DnaJ yes yes 5 0.0013686 24.153 By MS/MS 1 3099900 0 0 0 0 3099900 0 0 0 3846 61 4232 22960 17274 17274 1 0 0 0 0 47725000 0 0 0 RSPEWSAFGIRPPLR RAFKKQFAQTPALYRRSPEWSAFGIRPPLR RSPEWSAFGIRPPLRLGEFTMPEHKFVTLE R R S L R L 1 3 0 0 0 0 1 1 0 1 1 0 0 1 3 2 0 1 0 0 0 0 15 2 1 4 1767.9533 P0ACI0 P0ACI0 105 119 rob Right origin-binding protein yes yes 3 0.0020321 46.319 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51610000 13113000 11431000 0 0 13595000 13471000 0 0 3847 211 4233 22961;22962;22963;22964 17275;17276;17277;17278 17278 4 13113000 11701000 0 0 16400000 14923000 0 0 RSPSFGE FESYQERVEGNKVRERSPSFGEYYSHPRLF VEGNKVRERSPSFGEYYSHPRLFWLSQTPF E R S G E Y 0 1 0 0 0 0 1 1 0 0 0 0 0 1 1 2 0 0 0 0 0 0 7 1 0 1 778.36097 P21179 P21179 497 503 katE Catalase HPII yes yes 2 0.01158 70.912 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19316000 5258500 5687100 0 0 4190800 4179500 0 0 3848 293 4234 22965;22966;22967;22968 17279;17280;17281;17282;17283 17279 5 80795000 86729000 0 0 64522000 63347000 0 0 RSVNIFDK RFIFLEEGDIAEITRRSVNIFDKTGAEVKR DIAEITRRSVNIFDKTGAEVKRQDIESNLQ R R S D K T 0 1 1 1 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 8 1 0 0 977.52943 P17169 P17169 218 225 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 5.445E-18 128.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 984140000 245150000 285810000 0 0 227330000 225850000 0 0 3849 288 4235 22969;22970;22971;22972 17284;17285;17286;17287 17285 2 245150000 292560000 0 0 274220000 250200000 0 0 RSVNIFDKTGAEVK RFIFLEEGDIAEITRRSVNIFDKTGAEVKR RRSVNIFDKTGAEVKRQDIESNLQYDAGDK R R S V K R 1 1 1 1 0 0 1 1 0 1 0 2 0 1 0 1 1 0 0 2 0 0 14 2 1 1 1562.8417 P17169 P17169 218 231 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3 0.0019572 44.807 By MS/MS By MS/MS 1 1 11630000 5996800 5633300 0 0 0 0 0 0 3850 288 4236 22973;22974 17288 17288 0 5996800 5766200 0 0 0 0 0 0 RTAVAEYPTK GDGAILTATQNGYGKRTAVAEYPTKSRATK NGYGKRTAVAEYPTKSRATKGVISIKVTER K R T T K S 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 2 0 1 1 0 0 10 1 1 3 1134.6033 P0AES4 P0AES4 755 764 gyrA DNA gyrase subunit A yes yes 3 0.0035853 26.673 By MS/MS 1 0 0 0 0 0 0 0 0 0 3851 238 4237 22975 17289 17289 1 0 0 0 0 0 0 0 0 RTELPIGAYQVSGE KPAGAYLDIVRELRERTELPIGAYQVSGEY ERTELPIGAYQVSGEYAMIKFAALAGAIDE E R T G E Y 1 1 0 0 0 1 2 2 0 1 1 0 0 0 1 1 1 0 1 1 0 0 14 1 1 2 1518.7678 P0ACB2 P0ACB2 262 275 hemB Delta-aminolevulinic acid dehydratase yes yes 2 5.8727E-06 66.262 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 88193000 5769600 3762400 16741000 14325000 7840100 5795300 14418000 19542000 3852 207 4238 22976;22977;22978;22979;22980;22981;22982;22983 17290;17291;17292;17293;17294;17295;17296 17294 7 88649000 57377000 142240000 108610000 120700000 87836000 110960000 112150000 RTEPAAPVASTK ATVKTEPKPVAQTPKRTEPAAPVASTKAPA TPKRTEPAAPVASTKAPAATSTPAPKETAT K R T T K A 3 1 0 0 0 0 1 0 0 0 0 1 0 0 2 1 2 0 0 1 0 0 12 1 1 5 1226.6619 P11557 P11557 285 296 damX Cell division protein DamX yes yes 2 1.9355E-06 78.342 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13530000 4844000 3988800 0 0 2655200 2042000 0 0 3853 277 4239 22984;22985;22986;22987 17297;17298;17299;17300 17298 4 4844000 4083000 0 0 3203000 2262100 0 0 RTKIVAQAQAE RSQILDEAKAEAEQERTKIVAQAQAEIEAE AEQERTKIVAQAQAEIEAERKRAREELRKQ E R T A E I 3 1 0 0 0 2 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 11 2 0 3 1213.6779 P0ABA0 P0ABA0 98 108 atpF ATP synthase subunit b yes yes 2;3 0.001124 59.542 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 100350000 7112400 6810900 11592000 15327000 9285800 8367700 10392000 31460000 3854 192 4240 22988;22989;22990;22991;22992;22993;22994;22995;22996;22997;22998;22999;23000;23001;23002;23003 17301;17302;17303;17304;17305;17306 17306 6 109280000 103870000 98496000 116200000 142960000 126830000 79980000 180550000 RTLILNNLEFDHA CAFFDKRSKFVHYCPRTLILNNLEFDHADI CPRTLILNNLEFDHADIFDDLKAIQKQFHH P R T H A D 1 1 2 1 0 0 1 0 1 1 3 0 0 1 0 0 1 0 0 0 0 0 13 1 1 0 1554.8154 P37773 P37773 179 191 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 3 0.0027018 51.726 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3702400 238500 287620 0 0 1649500 1526800 0 0 3855 360 4241 23004;23005;23006;23007 17307 17307 1 1439700 1721400 0 0 2348400 2176500 0 0 RTPDDSFLEWHK LEIAQRENEATCFGRRTPDDSFLEWHKPAS FGRRTPDDSFLEWHKPASVLHNMVRAVADP R R T H K P 0 1 0 2 0 0 1 0 1 0 1 1 0 1 1 1 1 1 0 0 0 0 12 1 1 1 1529.7263 P77398 P77398 201 212 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 3.6406E-07 85.457 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 125410000 32176000 37572000 0 0 24501000 31160000 0 0 3856 432 4242 23008;23009;23010;23011 17308;17309;17310;17311 17309 4 32176000 38459000 0 0 29556000 34519000 0 0 RTPDDSFLEWHKPASVLHNMVR LEIAQRENEATCFGRRTPDDSFLEWHKPAS LEWHKPASVLHNMVRAVADPWPGAFSYVGN R R T V R A 1 2 1 2 0 0 1 0 2 0 2 1 1 1 2 2 1 1 0 2 0 0 22 2 1 3 2634.3125 P77398 P77398 201 222 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4;5;6 1.1919E-197 223.07 By MS/MS By MS/MS By MS/MS By MS/MS 9 12 12 8 7819900000 1509000000 1934800000 0 0 1618000000 2758100000 0 0 3857 432 4243;4244 23012;23013;23014;23015;23016;23017;23018;23019;23020;23021;23022;23023;23024;23025;23026;23027;23028;23029;23030;23031;23032;23033;23034;23035;23036;23037;23038;23039;23040;23041;23042;23043;23044;23045;23046;23047;23048;23049;23050;23051;23052 17312;17313;17314;17315;17316;17317;17318;17319;17320;17321;17322;17323;17324;17325;17326;17327;17328;17329;17330;17331;17332;17333;17334;17335;17336;17337;17338;17339;17340;17341;17342;17343;17344;17345;17346;17347;17348;17349;17350;17351;17352 17327 330 41 1622300000 2098800000 0 0 2158600000 3106100000 0 0 RTPRKKEPPRASPPGGLAE GLSGPAEVGPGAVGERTPRKKEPPRASPPG KKEPPRASPPGGLAEPPGSAGPQAGPTVVP E R T A E P 2 3 0 0 0 0 2 2 0 0 1 2 0 0 5 1 1 0 0 0 0 0 19 5 1 7 2043.1338 LSD1-FL-His LSD1-FL-His 60 78 yes yes 4;5 0.00056341 37.687 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 2 77304000 6103700 6521200 0 2767700 9972300 7335900 19821000 24782000 3858 24 4245 23053;23054;23055;23056;23057;23058;23059;23060;23061;23062;23063;23064;23065 17353;17354;17355;17356;17357;17358;17359;17360;17361;17362;17363 17363 11 93782000 99449000 0 20983000 153530000 111190000 152550000 142220000 RTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPME GLSGPAEVGPGAVGERTPRKKEPPRASPPG QAGPTVVPGSATPMETGIAETPEGRRTSRR E R T M E T 5 3 0 0 0 1 3 6 0 0 1 2 1 0 11 3 3 0 0 2 0 0 41 5 2 16 4029.0854 LSD1-FL-His LSD1-FL-His 60 100 yes yes 3;4;5;6 2.1809E-230 208.33 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 14 9 9 14 7 7 11 13 91710000000 7432900000 9274000000 14381000000 16992000000 5768800000 5123400000 13860000000 18878000000 3859 24 4246;4247 23066;23067;23068;23069;23070;23071;23072;23073;23074;23075;23076;23077;23078;23079;23080;23081;23082;23083;23084;23085;23086;23087;23088;23089;23090;23091;23092;23093;23094;23095;23096;23097;23098;23099;23100;23101;23102;23103;23104;23105;23106;23107;23108;23109;23110;23111;23112;23113;23114;23115;23116;23117;23118;23119;23120;23121;23122;23123;23124;23125;23126;23127;23128;23129;23130;23131;23132;23133;23134;23135;23136;23137;23138;23139;23140;23141;23142;23143;23144;23145;23146;23147;23148;23149 17364;17365;17366;17367;17368;17369;17370;17371;17372;17373;17374;17375;17376;17377;17378;17379;17380;17381;17382;17383;17384;17385;17386;17387;17388;17389;17390;17391;17392;17393;17394;17395;17396;17397;17398;17399;17400;17401;17402;17403;17404;17405;17406;17407;17408;17409;17410;17411;17412;17413;17414;17415;17416;17417;17418;17419;17420;17421;17422;17423;17424;17425;17426;17427;17428;17429;17430;17431;17432;17433;17434;17435;17436;17437;17438;17439;17440;17441;17442;17443;17444;17445;17446;17447;17448;17449;17450;17451;17452;17453;17454;17455;17456;17457;17458;17459;17460;17461;17462;17463;17464;17465;17466;17467;17468;17469;17470;17471;17472;17473;17474;17475;17476;17477;17478;17479;17480;17481;17482;17483;17484;17485;17486;17487;17488;17489;17490;17491;17492;17493;17494;17495;17496;17497;17498;17499;17500;17501;17502;17503;17504;17505;17506;17507;17508;17509;17510;17511;17512;17513;17514;17515;17516;17517;17518;17519;17520;17521;17522;17523;17524;17525;17526;17527;17528;17529;17530;17531;17532;17533;17534;17535;17536;17537;17538 17371 41 175 114140000000 141420000000 122190000000 128830000000 88816000000 77653000000 106670000000 108340000000 RTRKLQQYRE ERREEESAAAAEVEERTRKLQQYREMLIAD AEVEERTRKLQQYREMLIADGIDPNELLNS E R T R E M 0 3 0 0 0 2 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 10 4 0 0 1376.7637 P0ACF8 P0ACF8 54 63 hns DNA-binding protein H-NS yes yes 4 0.0058463 27.481 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 4900000000 0 0 552100000 776100000 0 0 1618600000 1953200000 3860 210 4248 23150;23151;23152;23153;23154;23155;23156;23157;23158 17539;17540;17541;17542;17543;17544 17542 5 0 0 4691100000 5884000000 0 0 12457000000 11209000000 RTSHITVVVSDR RIMPRAKGRADRILKRTSHITVVVSDR___ ILKRTSHITVVVSDR_______________ K R T D R - 0 2 0 1 0 0 0 0 1 1 0 0 0 0 0 2 2 0 0 3 0 0 12 1 0 0 1368.7474 P61175 P61175 99 110 rplV 50S ribosomal protein L22 yes yes 3 0.014903 25.978 By MS/MS By MS/MS 1 1 6573200 0 0 0 0 2950300 3622900 0 0 3861 385 4249 23159;23160 17545 17545 1 0 0 0 0 3558900 4013400 0 0 RTYLYQGIAE NLLVVKGAHADEQKERTYLYQGIAERNFER DEQKERTYLYQGIAERNFERKFQLAENIHV E R T A E R 1 1 0 0 0 1 1 1 0 1 1 0 0 0 0 0 1 0 2 0 0 0 10 1 0 1 1212.6139 P0C054 P0C054 83 92 ibpA Small heat shock protein IbpA yes yes 2 0.013949 47.603 By matching By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 1 1 40147000 731920 504430 0 3409400 5102500 6735500 9237500 14425000 3862 267 4250 23161;23162;23163;23164;23165;23166;23167;23168 17546 17546 1 11246000 7692600 0 25849000 24519000 7461400 71094000 82785000 RVAKLAGGVAVIKVGAATE IEEATSDYDREKLQERVAKLAGGVAVIKVG LAGGVAVIKVGAATEVEMKEKKARVEDALH E R V T E V 5 1 0 0 0 0 1 3 0 1 1 2 0 0 0 0 1 0 0 4 0 0 19 3 0 5 1809.0836 P0A6F5 P0A6F5 368 386 groL 60 kDa chaperonin yes yes 3 3.4178E-42 131.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 690590000 24410000 33918000 106640000 144520000 68762000 61435000 77447000 173460000 3863 68 4251 23169;23170;23171;23172;23173;23174;23175;23176;23177 17547;17548;17549;17550;17551;17552 17548 5 371120000 517260000 906070000 1095700000 1058700000 931140000 596050000 995460000 RVAKLAGGVAVIKVGAATEVE IEEATSDYDREKLQERVAKLAGGVAVIKVG GGVAVIKVGAATEVEMKEKKARVEDALHAT E R V V E M 5 1 0 0 0 0 2 3 0 1 1 2 0 0 0 0 1 0 0 5 0 0 21 3 1 5 2037.1946 P0A6F5 P0A6F5 368 388 groL 60 kDa chaperonin yes yes 3;4 8.6362E-09 65.924 By MS/MS By MS/MS By matching 2 2 1 96940000 0 0 0 0 55107000 37806000 0 4027200 3864 68 4252 23178;23179;23180;23181;23182 17553;17554;17555;17556 17555 4 0 0 0 0 848420000 573010000 0 23112000 RVALADK ______________________________ SMKAREVKRVALADKYFAKRAELKAIISDV K R V D K Y 2 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 1 0 2 771.46029 P0AG59 P0AG59 13 19 rpsN 30S ribosomal protein S14 yes yes 2 0.001349 94.539 By MS/MS By MS/MS By MS/MS 1 1 1 36185000 19728000 14994000 0 0 0 1462800 0 0 3865 260 4253 23183;23184;23185 17557;17558 17558 1 19728000 15348000 0 0 0 1620400 0 0 RVALADKYFAK ______________________________ REVKRVALADKYFAKRAELKAIISDVNASD K R V A K R 3 1 0 1 0 0 0 0 0 0 1 2 0 1 0 0 0 0 1 1 0 0 11 2 0 3 1280.7241 P0AG59 P0AG59 13 23 rpsN 30S ribosomal protein S14 yes yes 3 0.0010257 63.073 By MS/MS 1 5362800 0 0 0 0 5362800 0 0 0 3866 260 4254 23186 17559 17559 1 0 0 0 0 6469200 0 0 0 RVDDALYR VAHHEGNESIDELFKRVDDALYRAKNDGRN SIDELFKRVDDALYRAKNDGRNRVLAA___ K R V Y R A 1 2 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 1 0 1 1006.5196 P77302 P77302 391 398 ydaM Probable diguanylate cyclase YdaM yes yes 2 0.018052 48.283 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 10263000 2778000 3537800 0 0 1898100 2049400 0 0 3867 429 4255 23187;23188;23189;23190 17560 17560 1 2778000 3621300 0 0 2289600 2270300 0 0 RVDEIATDVDKTP LHNAKANMKVLHPLPRVDEIATDVDKTPHA LPRVDEIATDVDKTPHAWYFQQAGNGIFAR P R V T P H 1 1 0 3 0 0 1 0 0 1 0 1 0 0 1 0 2 0 0 2 0 0 13 2 1 1 1457.7362 P0A786 P0A786 270 282 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.010231 65.5 By matching By MS/MS 1 1 4227400 0 0 0 0 1011000 3216400 0 0 3868 97 4256 23191;23192 17561 17561 1 0 0 0 0 1439300 4585000 0 0 RVEIEVK VKQRAALIDCLAPDRRVEIEVKGIKDVVTQ IDCLAPDRRVEIEVKGIKDVVTQPQA____ R R V V K G 0 1 0 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 7 1 2 0 871.51272 P0A910 P0A910 329 335 ompA Outer membrane protein A yes yes 2 0.003728 70.912 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38140000 8885900 10470000 0 0 8886400 9897800 0 0 3869 158 4257 23193;23194;23195;23196 17562;17563;17564;17565 17564 4 8885900 10717000 0 0 10720000 10965000 0 0 RVELITTDGFLHPNQVLK ARVLQALLSRWPEHRRVELITTDGFLHPNQ LITTDGFLHPNQVLKERGLMKKKGFPESYD R R V L K E 0 1 1 1 0 1 1 1 1 1 3 1 0 1 1 0 2 0 0 2 0 0 18 1 1 1 2079.1477 P0A6I3 P0A6I3 120 137 coaA Pantothenate kinase yes yes 3 0.011838 24.506 By MS/MS 1 11621000 11621000 0 0 0 0 0 0 0 3870 72 4258 23197 17566 17566 1 11621000 0 0 0 0 0 0 0 RVFAYATHPIFSGNAANNLR TLCKAAEALKERGAKRVFAYATHPIFSGNA ATHPIFSGNAANNLRNSVIDEVVVCDTIPL K R V L R N 4 2 3 0 0 0 0 1 1 1 1 0 0 2 1 1 1 0 1 1 0 0 20 1 0 5 2218.1396 P0A717 P0A717 243 262 prs Ribose-phosphate pyrophosphokinase yes yes 3;4 0.0037074 30.042 By matching By MS/MS By matching By MS/MS 1 1 1 2 51590000 10046000 12100000 0 0 9532700 19910000 0 0 3871 91 4259 23198;23199;23200;23201;23202 17567;17568 17567 1 10046000 12386000 0 0 11499000 22056000 0 0 RVGDLAR KAELEQAKIAIEQARRVGDLARMSELQYGK KIAIEQARRVGDLARMSELQYGKIPELEKQ R R V A R M 1 2 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 1 0 1 785.45079 P63284-2;P63284 P63284-2 343 349 clpB Chaperone protein ClpB yes no 2 0.015863 52.403 By MS/MS By MS/MS By matching 1 1 1 6377000 3204500 2618300 0 0 0 554150 0 0 3872 393 4260 23203;23204;23205 17569 17569 0 3204500 2680100 0 0 0 613870 0 0 RVGFFNPIASE VVADSRNARNGRFIERVGFFNPIASEKEEG RFIERVGFFNPIASEKEEGTRLDLDRIAHW E R V S E K 1 1 1 0 0 0 1 1 0 1 0 0 0 2 1 1 0 0 0 1 0 0 11 1 0 2 1235.6299 P0A7T3 P0A7T3 35 45 rpsP 30S ribosomal protein S16 yes yes 2 0.0074657 48.796 By MS/MS By MS/MS 1 1 3091700 0 779710 0 0 0 0 0 2312000 3873 124 4261 23206;23207 17570 17570 1 0 11891000 0 0 0 0 0 13268000 RVGFFNPIASEKEE VVADSRNARNGRFIERVGFFNPIASEKEEG ERVGFFNPIASEKEEGTRLDLDRIAHWVGQ E R V E E G 1 1 1 0 0 0 3 1 0 1 0 1 0 2 1 1 0 0 0 1 0 0 14 2 2 2 1621.81 P0A7T3 P0A7T3 35 48 rpsP 30S ribosomal protein S16 yes yes 3 0.0016101 40.552 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 59170000 3232800 3814200 4971000 6655900 5479300 6266300 12966000 15784000 3874 124 4262 23208;23209;23210;23211;23212;23213;23214;23215 17571;17572;17573;17574 17574 4 49671000 58166000 42238000 50462000 84358000 94975000 99793000 90583000 RVIEDQLQAGTLSEVAVPLPR KHAVRHGLGISCLSRRVIEDQLQAGTLSEV LQAGTLSEVAVPLPRLMRTLWRIHHRQKHL R R V P R L 2 2 0 1 0 2 2 1 0 1 3 0 0 0 2 1 1 0 0 3 0 0 21 1 2 4 2290.2645 P0ACR4 P0ACR4 240 260 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 3 9.7765E-86 169.39 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60066000 13458000 16352000 0 0 14944000 15311000 0 0 3875 218 4263 23216;23217;23218;23219 17575;17576;17577;17578 17575 4 13458000 16738000 0 0 18027000 16961000 0 0 RVIFDVAHNP SAILPGRFQIVSESPRVIFDVAHNPHAAEY VSESPRVIFDVAHNPHAAEYLTGRMKALPK P R V N P H 1 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 2 0 0 10 1 0 1 1166.6196 P08192 P08192 298 307 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 2 0.022606 55.549 By MS/MS By MS/MS 1 1 7458500 557880 0 0 0 6900600 0 0 0 3876 59 4264 23220;23221 17579 17579 1 3367700 0 0 0 9824300 0 0 0 RVLDELTLTK VALRQSVEADINGLRRVLDELTLTKADLEM INGLRRVLDELTLTKADLEMQIESLTEELA R R V T K A 0 1 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 10 1 1 0 1186.6921 CON__P13645 CON__P13645 257 266 yes yes 2 4.8017E-15 132.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 74848000 16552000 8689900 0 0 24927000 24679000 0 0 + 3877 12 4265 23222;23223;23224;23225 17580;17581;17582;17583 17583 4 16552000 8895000 0 0 30070000 27338000 0 0 RVLENAEGDRTTP GTTNSCVAIMDGTTPRVLENAEGDRTTPSI TPRVLENAEGDRTTPSIIAYTQDGETLVGQ P R V T P S 1 2 1 1 0 0 2 1 0 0 1 0 0 0 1 0 2 0 0 1 0 0 13 2 2 1 1456.727 P0A6Y8 P0A6Y8 25 37 dnaK Chaperone protein DnaK yes yes 2;3 2.9773E-25 136.38 By MS/MS By MS/MS By MS/MS 2 2 2 353330000 88845000 77925000 0 0 0 186560000 0 0 3878 86 4266 23226;23227;23228;23229;23230;23231 17584;17585;17586;17587;17588;17589 17589 6 536320000 466380000 0 0 0 265940000 0 0 RVMTVGTHGTTYGGNP GGFPVGALLATEECARVMTVGTHGTTYGGN VMTVGTHGTTYGGNPLASAVAGKVLELINT A R V N P L 0 1 1 0 0 0 0 4 1 0 0 0 1 0 1 0 4 0 1 2 0 0 16 1 0 0 1646.7835 P77581 P77581 271 286 astC Succinylornithine transaminase yes yes 3 1.8152E-11 69.594 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 17409000 2718800 961830 0 0 0 13729000 0 0 3879 437 4267;4268 23232;23233;23234;23235;23236;23237 17590;17591;17592 17590 339 3 16412000 5756600 0 0 0 19570000 0 0 RVPHPAYGNAR LSTEEMDSVFALPYKRVPHPAYGNARIPAY LPYKRVPHPAYGNARIPAYEMIRFSVNIMR K R V A R I 2 2 1 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 1 1 0 0 11 1 0 4 1236.6476 Q46861 Q46861 359 369 ygiQ UPF0313 protein YgiQ yes yes 3 0.0025933 40.496 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6051300 0 3143300 0 0 1511400 1396700 0 0 3880 441 4269 23238;23239;23240;23241 17593;17594;17595 17593 3 0 3217500 0 0 1823200 1547200 0 0 RVPLAPDIDAAIIAR PDVRGREQILKVHMRRVPLAPDIDAAIIAR RVPLAPDIDAAIIARGTPGFSGADLANLVN R R V A R G 4 2 0 2 0 0 0 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 15 1 0 6 1589.9253 P0AAI3 P0AAI3 337 351 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 3 0.00078562 49.595 By MS/MS 1 6128900 0 6128900 0 0 0 0 0 0 3881 185 4270 23242 17596 17596 1 0 6273600 0 0 0 0 0 0 RVRQIQVE ATLEDVGREIGLTRERVRQIQVEGLRRLRE EIGLTRERVRQIQVEGLRRLREILQTQGLN E R V V E G 0 2 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 8 2 0 0 1026.5934 P13445 P13445 301 308 rpoS RNA polymerase sigma factor RpoS yes yes 3 0.0087066 55.676 By MS/MS By MS/MS By MS/MS 1 1 1 16812000 0 0 6363100 5081000 0 0 5367600 0 3882 279 4271 23243;23244;23245 17597 17597 1 0 0 54066000 38522000 0 0 41310000 0 RVTFLGFDAATEAR VSWSNLQDQQSIDERRVTFLGFDAATEARY RRVTFLGFDAATEARYLGYVRFMVNVEGRY R R V A R Y 3 2 0 1 0 0 1 1 0 0 1 0 0 2 0 0 2 0 0 1 0 0 14 1 1 3 1552.7998 P0A8W8 P0A8W8 89 102 yfbU UPF0304 protein YfbU yes yes 3 0.0010811 51.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22350000 5093000 5682900 0 0 5563400 6010600 0 0 3883 155 4272 23246;23247;23248;23249 17598;17599;17600;17601 17599 4 5093000 5817100 0 0 6711100 6658400 0 0 RVVEPLITLAK HEIIKTTLPKAKELRRVVEPLITLAKTDSV KELRRVVEPLITLAKTDSVANRRLAFARTR R R V A K T 1 1 0 0 0 0 1 0 0 1 2 1 0 0 1 0 1 0 0 2 0 0 11 1 1 2 1237.7758 P0AG44 P0AG44 46 56 rplQ 50S ribosomal protein L17 yes yes 2 2.7679E-06 107.24 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 109840000 29321000 34848000 0 0 23469000 22203000 0 0 3884 257 4273 23250;23251;23252;23253 17602;17603;17604;17605 17605 4 29321000 35671000 0 0 28311000 24596000 0 0 RVWATAQK HHQHQDAAHDVCHFRRVWATAQKLAADDDV HDVCHFRRVWATAQKLAADDDVDMLVILTA R R V Q K L 2 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 8 1 0 2 958.53485 P46144 P46144 32 39 yedJ Uncharacterized protein YedJ yes yes 2 0.018745 47.849 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13469000 5205200 5127200 0 0 1651400 1485300 0 0 3885 371 4274 23254;23255;23256;23257 17606;17607 17606 2 5205200 5248300 0 0 1992100 1645400 0 0 RWPGRLTVDE ELNGLLNDALAPVSERWPGRLTVDELHPPI APVSERWPGRLTVDELHPPIPGYECPPNHQ E R W D E L 0 2 0 1 0 0 1 1 0 0 1 0 0 0 1 0 1 1 0 1 0 0 10 2 0 1 1227.636 P23908 P23908 288 297 argE Acetylornithine deacetylase yes yes 2;3 0.006717 53.683 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 189580000 21613000 24101000 32507000 34408000 8379400 12268000 27956000 28350000 3886 308 4275 23258;23259;23260;23261;23262;23263;23264;23265;23266;23267;23268;23269;23270;23271;23272;23273 17608;17609;17610;17611;17612 17612 5 332080000 367550000 276200000 260870000 129010000 185950000 215150000 162700000 RYAGVGDIIK ARRVMCIKVLGGSHRRYAGVGDIIKITIKE GGSHRRYAGVGDIIKITIKEAIPRGKVKKG R R Y I K I 1 1 0 1 0 0 0 2 0 2 0 1 0 0 0 0 0 0 1 1 0 0 10 1 0 1 1090.6135 P0ADY3 P0ADY3 31 40 rplN 50S ribosomal protein L14 yes yes 3 0.0010908 60.641 By MS/MS By MS/MS By matching By matching 1 1 1 1 70058000 28356000 24042000 0 0 9857200 7802300 0 0 3887 228 4276 23274;23275;23276;23277 17613 17613 0 28356000 24609000 0 0 11891000 8643100 0 0 RYAPNAKDLAGRDVVARSIMIE EGGYLLNKHGERFMERYAPNAKDLAGRDVV DLAGRDVVARSIMIEIREGRGCDGPWGPHA E R Y I E I 4 3 1 2 0 0 1 1 0 2 1 1 1 0 1 1 0 0 1 2 0 0 22 4 0 5 2444.2958 P0AC41 P0AC41 275 296 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 4 1.2447E-05 49.089 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 19535000 2961600 3148100 0 0 6922300 6502600 0 0 3888 203 4277 23278;23279;23280;23281 17614;17615 17614 2 45504000 48008000 0 0 106580000 98556000 0 0 RYFADRNLGQE TSLFSLSMGCVTWLERYFADRNLGQENFDA TWLERYFADRNLGQENFDAAEKAAREVLRP E R Y Q E N 1 2 1 1 0 1 1 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 11 2 0 1 1367.6582 P25552 P25552 170 180 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 3 0.010801 23.226 By MS/MS 1 0 0 0 0 0 0 0 0 0 3889 316 4278 23282 17616 17616 1 0 0 0 0 0 0 0 0 RYFMLNKP DVAYDGNPLAQQHGPRYFMLNKPQGYVCST LAQQHGPRYFMLNKPQGYVCSTDDPDHPTV P R Y K P Q 0 1 1 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 8 2 0 0 1067.5586 P0AA43 P0AA43 61 68 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 0.0043451 94.163 By MS/MS By MS/MS 1 1 73255000 0 0 0 0 51633000 21622000 0 0 3890 183 4279 23283;23284 17617;17618 17617 2 0 0 0 0 73509000 30822000 0 0 RYILAPK RSANIALVLYKDGERRYILAPKGLKAGDQI VLYKDGERRYILAPKGLKAGDQIQSGVDAA R R Y P K G 1 1 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 7 1 0 2 859.52797 P60422 P60422 102 108 rplB 50S ribosomal protein L2 yes yes 2 0.00017927 110.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 330710000 106600000 108510000 0 0 57266000 58330000 0 0 3891 379 4280 23285;23286;23287;23288 17619;17620;17621;17622 17621 4 106600000 111070000 0 0 69080000 64616000 0 0 RYLAEQAMDRANSYVIGDRATDIQLAE ADECDCRKPKVKLVERYLAEQAMDRANSYV SYVIGDRATDIQLAENMGITGLRYDRETLN E R Y A E N 5 3 1 3 0 2 2 1 0 2 2 0 1 0 0 1 1 0 2 1 0 0 27 3 1 5 3068.4985 P06987 P06987 113 139 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3;4 5.3408E-23 94.446 By MS/MS By MS/MS 2 1 101900000 0 0 0 0 63808000 38089000 0 0 3892 55 4281 23289;23290;23291 17623;17624;17625;17626;17627 17627 5 0 0 0 0 982390000 577300000 0 0 RYQSQLWWIK EDASPCLRLGAFEIRRYQSQLWWIKSVTGQ AFEIRRYQSQLWWIKSVTGQSENIVPWQTW R R Y I K S 0 1 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 2 1 0 0 0 10 1 0 0 1406.7459 P52097 P52097 302 311 tilS tRNA(Ile)-lysidine synthase yes yes 2 0.0061563 34.253 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 3893 375 4282 23292;23293 17628;17629 17628 29;77 0 0 0 0 0 0 0 0 0 RYTAAITGAE MVHPDQSEQVPGMIERYTAAITGAEGKIHR PGMIERYTAAITGAEGKIHRLEDWGRRQLA E R Y A E G 3 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 0 10 1 0 3 1051.5298 P02358 P02358 24 33 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 2 2.8457E-05 107.57 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 99311000 3034800 2606900 19816000 19570000 0 2114600 20642000 31527000 3894 35 4283 23294;23295;23296;23297;23298;23299;23300 17630;17631;17632;17633;17634 17634 5 46630000 39755000 168370000 148370000 0 32050000 158860000 180930000 SADDSVSAQEK VERLVQQFADAGIRKSADDSVSAQEKQTLI GIRKSADDSVSAQEKQTLIDHLNQKNSGPD K S A E K Q 2 0 0 2 0 1 1 0 0 0 0 1 0 0 0 3 0 0 0 1 0 0 11 0 1 2 1135.4993 P0A705 P0A705 32 42 infB Translation initiation factor IF-2 yes yes 2 0.011247 45.368 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7749100 2684300 3055400 0 0 1255300 754140 0 0 3895 90 4284 23301;23302;23303;23304 17635;17636 17635 2 2684300 3127500 0 0 1514300 835420 0 0 SADIISAR ELNKGGDFAALAKEKSADIISARNGGDMGW AALAKEKSADIISARNGGDMGWLEDATIPD K S A A R N 2 1 0 1 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 8 0 0 2 831.44503 P0ADY1 P0ADY1 303 310 ppiD Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.005205 43.808 By MS/MS 1 0 0 0 0 0 0 0 0 0 3896 227 4285 23305 17637 17637 1 0 0 0 0 0 0 0 0 SADLLAILK VKGRVVAILLNDEVRSADLLAILKALKAKG LNDEVRSADLLAILKALKAKGVHAKLLYSR R S A L K A 2 0 0 1 0 0 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 9 0 0 2 942.57498 P21179 P21179 613 621 katE Catalase HPII yes yes 2 1.6348E-13 129.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 289800000 84113000 92106000 0 0 55229000 58352000 0 0 3897 293 4286 23306;23307;23308;23309 17638;17639;17640;17641 17638 4 84113000 94280000 0 0 66623000 64641000 0 0 SAEHVLTMLNEHEVK ______________________________ SAEHVLTMLNEHEVKFVDLRFTDTKGKEQH M S A V K F 1 0 1 0 0 0 3 0 2 0 2 1 1 0 0 1 1 0 0 2 0 0 15 0 3 1 1735.8563 P0A9C5 P0A9C5 2 16 glnA Glutamine synthetase yes yes 3 7.2476E-12 91.845 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 20455000 0 5410300 0 0 6893000 6269300 0 1882200 3898 164 4287 23310;23311;23312;23313 17642;17643;17644 17644 3 0 5538000 0 0 8315000 6945000 0 10801000 SAFLHLKE PPVHYIATDNYALVESAFLHLKEKGVNRFA DNYALVESAFLHLKEKGVNRFAFYGLPESS E S A K E K 1 0 0 0 0 0 1 0 1 0 2 1 0 1 0 1 0 0 0 0 0 0 8 1 0 1 943.51272 P0ACI3 P0ACI3 109 116 xylR Xylose operon regulatory protein yes yes 2 0.005903 97.431 By MS/MS By matching By MS/MS 1 1 1 11304000 2482500 1997700 0 0 0 0 0 6823500 3899 212 4288 23314;23315;23316 17645 17645 1 38143000 30466000 0 0 0 0 0 39159000 SAFQVHRLADDALNGVTGLVE LAAHHDLRCRWPGTESAFQVHRLADDALNG RLADDALNGVTGLVEYHEHFNRF_______ E S A V E Y 3 1 1 2 0 1 1 2 1 0 3 0 0 1 0 1 1 0 0 3 0 0 21 1 0 3 2211.1284 P63417 P63417 139 159 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 3 0.00066747 37.969 By MS/MS By MS/MS 1 1 12699000 0 0 0 0 6959700 5739300 0 0 3900 394 4289 23317;23318 17646;17647 17646 2 0 0 0 0 107150000 86987000 0 0 SAGTYVQIVAR HNVEMKPGKGGQLARSAGTYVQIVARDGAY QLARSAGTYVQIVARDGAYVTLRLRSGEMR R S A A R D 2 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 1 2 0 0 11 0 0 2 1163.6299 P60422 P60422 157 167 rplB 50S ribosomal protein L2 yes yes 2 3.1583E-95 226.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1928800000 536330000 476850000 0 0 436620000 479030000 0 0 3901 379 4290 23319;23320;23321;23322;23323 17648;17649;17650;17651 17650 4 536330000 488110000 0 0 541140000 530660000 0 0 SAIPAEQFKNAQGE IDKDVVLVDAGLKSESAIPAEQFKNAQGEL ESAIPAEQFKNAQGELEIQVGDEVDVALDA E S A G E L 3 0 1 0 0 2 2 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 14 1 1 4 1488.7209 P0AG67 P0AG67 46 59 rpsA 30S ribosomal protein S1 yes yes 2 1.0097E-23 126.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 198650000 32959000 33252000 20617000 24641000 18147000 16094000 20779000 32163000 3902 261 4291 23324;23325;23326;23327;23328;23329;23330;23331;23332;23333;23334;23335 17652;17653;17654;17655;17656;17657 17652 6 202100000 213230000 175180000 186810000 100900000 75344000 159920000 184580000 SAIPAEQFKNAQGELE IDKDVVLVDAGLKSESAIPAEQFKNAQGEL AIPAEQFKNAQGELEIQVGDEVDVALDAVE E S A L E I 3 0 1 0 0 2 3 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 16 1 2 4 1730.8475 P0AG67 P0AG67 46 61 rpsA 30S ribosomal protein S1 yes yes 2 5.7081E-07 75.788 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 49035000 0 0 9251000 8899500 4260100 0 11560000 15065000 3903 261 4292 23336;23337;23338;23339;23340 17658 17658 1 0 0 78604000 67472000 5138900 0 88965000 86453000 SAIYPLTPEQDAAAR AQGMRQGNDHGTQYRSAIYPLTPEQDAAAR SAIYPLTPEQDAAARASLERFQAAMLAADD R S A A R A 4 1 0 1 0 1 1 0 0 1 1 0 0 0 2 1 1 0 1 0 0 0 15 0 1 6 1601.8049 P0A744 P0A744 137 151 msrA Peptide methionine sulfoxide reductase MsrA yes yes 2 1.3695E-07 65.574 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 16238000 9755900 0 0 0 0 6481900 0 0 3904 94 4293 23341;23342;23343;23344 17659;17660;17661 17661 3 9755900 0 0 0 0 7180500 0 0 SALAQEATQQHGTQGFAVLSYVYEHEK RGYNNRSEAIRDILRSALAQEATQQHGTQG TQGFAVLSYVYEHEKRDLASRIVSTQHHHH R S A E K R 4 0 0 0 0 4 3 2 2 0 2 1 0 1 0 2 2 0 2 2 0 0 27 0 3 4 2991.4363 P0A6Z6 P0A6Z6 38 64 nikR Nickel-responsive regulator yes yes 3;4 1.2998E-52 118.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 113630000 5327600 18252000 0 0 42855000 47197000 0 0 3905 89 4294 23345;23346;23347;23348;23349;23350 17662;17663;17664;17665;17666;17667;17668;17669 17665 8 5327600 18683000 0 0 51696000 52284000 0 0 SALAQEATQQHGTQGFAVLSYVYEHEKR RGYNNRSEAIRDILRSALAQEATQQHGTQG QGFAVLSYVYEHEKRDLASRIVSTQHHHHD R S A K R D 4 1 0 0 0 4 3 2 2 0 2 1 0 1 0 2 2 0 2 2 0 0 28 1 3 4 3147.5374 P0A6Z6 P0A6Z6 38 65 nikR Nickel-responsive regulator yes yes 4;5 4.192E-46 113.9 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 178680000 47069000 44085000 0 0 34128000 53397000 0 0 3906 89 4295 23351;23352;23353;23354;23355;23356;23357;23358 17670;17671;17672;17673;17674;17675;17676;17677;17678 17674 9 47069000 45126000 0 0 41169000 59152000 0 0 SALFTPFK LKAKNGEAAIVIGTRSALFTPFKNLGVIVI AIVIGTRSALFTPFKNLGVIVIDEEHDSSY R S A F K N 1 0 0 0 0 0 0 0 0 0 1 1 0 2 1 1 1 0 0 0 0 0 8 0 0 2 909.496 P17888 P17888 305 312 priA Primosomal protein N yes yes 2 0.00093192 97.798 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33549000 7063900 7321500 0 0 10886000 8277700 0 0 3907 290 4296 23359;23360;23361;23362 17679;17680;17681;17682 17682 4 7063900 7494300 0 0 13132000 9169800 0 0 SALPTPHEIR IIREEIKEVAPHRERSALPTPHEIRNHLDD PHRERSALPTPHEIRNHLDDYVIGQEQAKK R S A I R N 1 1 0 0 0 0 1 0 1 1 1 0 0 0 2 1 1 0 0 0 0 0 10 0 1 3 1119.6037 P0A6H1 P0A6H1 62 71 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 3 0.00018451 78.655 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44471000 11012000 13797000 0 0 8578100 11085000 0 0 3908 70 4297 23363;23364;23365;23366 17683;17684;17685;17686 17685 4 11012000 14122000 0 0 10348000 12280000 0 0 SALTALE EAGDKLPADDKTAIESALTALETALKGEDK ADDKTAIESALTALETALKGEDKAAIEAKM E S A L E T 2 0 0 0 0 0 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 7 0 0 2 703.37522 P0A6Y8 P0A6Y8 567 573 dnaK Chaperone protein DnaK yes yes 1 7.3415E-12 100.67 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1625200000 156890000 120840000 227370000 274100000 67766000 64767000 305090000 408430000 3909 86 4298 23367;23368;23369;23370;23371;23372;23373;23374 17687;17688;17689;17690 17688 0 2410600000 1842800000 1931900000 2078100000 1043300000 981640000 2348000000 2343900000 SANHAVEEVR NILPTRERASLILTKSANHAVEEVRLRK__ LILTKSANHAVEEVRLRK____________ K S A V R L 2 1 1 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 2 0 0 10 0 2 2 1110.5418 P0A6I3 P0A6I3 304 313 coaA Pantothenate kinase yes yes 2 0.019211 40.002 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6479300 2460300 2041100 0 0 963020 1014800 0 0 3910 72 4299 23375;23376;23377;23378 17691 17691 1 2460300 2089300 0 0 1161700 1124200 0 0 SANIALVLYK GIPAVVERLEYDPNRSANIALVLYKDGERR YDPNRSANIALVLYKDGERRYILAPKGLKA R S A Y K D 2 0 1 0 0 0 0 0 0 1 2 1 0 0 0 1 0 0 1 1 0 0 10 0 0 2 1090.6386 P60422 P60422 88 97 rplB 50S ribosomal protein L2 yes yes 2 1.4544E-20 138.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1103000000 344910000 198210000 0 0 274830000 285080000 0 0 3911 379 4300 23379;23380;23381;23382 17692;17693;17694;17695 17693 4 344910000 202890000 0 0 331520000 315810000 0 0 SANIALVLYKDGERR GIPAVVERLEYDPNRSANIALVLYKDGERR SANIALVLYKDGERRYILAPKGLKAGDQIQ R S A R R Y 2 2 1 1 0 0 1 1 0 1 2 1 0 0 0 1 0 0 1 1 0 0 15 2 1 2 1703.9319 P60422 P60422 88 102 rplB 50S ribosomal protein L2 yes yes 3 4.1227E-08 66.285 By MS/MS By MS/MS 1 1 10258000 10258000 0 0 0 0 0 0 0 3912 379 4301 23383;23384 17696;17697 17697 2 10258000 0 0 0 0 0 0 0 SAPFAPAAR LYIEGDEHNPHSAFRSAPFAPAARPKMKIT PHSAFRSAPFAPAARPKMKITGIKAPEFTP R S A A R P 4 1 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 9 0 0 6 886.4661 P0AAN3 P0AAN3 27 35 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 2 0.0021403 71.296 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 55544000 10423000 16430000 0 0 15315000 13377000 0 0 3913 187 4302 23385;23386;23387;23388 17698;17699;17700;17701 17698 4 10423000 16818000 0 0 18475000 14818000 0 0 SAQTGTGKTAGFTLP QQAIPAVLEGRDLMASAQTGTGKTAGFTLP SAQTGTGKTAGFTLPLLQHLITRQPHAKGR A S A L P L 2 0 0 0 0 1 0 3 0 0 1 1 0 1 1 1 4 0 0 0 0 0 15 1 0 2 1435.7307 P25888 P25888 44 58 rhlE ATP-dependent RNA helicase RhlE yes yes 2 0.0036502 60.434 By MS/MS By MS/MS 1 1 42026000 0 0 0 0 29327000 12699000 0 0 3914 318 4303 23389;23390 17702 17702 1 0 0 0 0 41752000 18103000 0 0 SARLEKP MLFQALHLYRSNFKPSARLEKPYAMVCINI LYRSNFKPSARLEKPYAMVCINIIAADSNR P S A K P Y 1 1 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 7 2 1 1 799.4552 P0ADV5 P0ADV5 212 218 yhbW Uncharacterized protein YhbW yes yes 2 0.0016691 74.415 By MS/MS By MS/MS By matching 1 1 1 17417000 7794300 9322600 0 0 0 299980 0 0 3915 226 4304 23391;23392;23393 17703 17703 1 47050000 55796000 0 0 0 427620 0 0 SASAFNTDK REEMIKYFTLNAVSKSASAFNTDKLLWLNH LNAVSKSASAFNTDKLLWLNHHYINALPPE K S A D K L 2 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 9 0 0 2 939.42977 P04805 P04805 294 302 gltX Glutamate--tRNA ligase yes yes 2 0.00098769 90.657 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20652000 7164900 5935100 0 0 3997100 3555000 0 0 3916 45 4305 23394;23395;23396;23397 17704;17705;17706;17707;17708 17708 5 7164900 6075200 0 0 4821800 3938200 0 0 SASNENFRDQLAAADIIVANK ATLCILDPRLLLDEKSASNENFRDQLAAAD FRDQLAAADIIVANKSDRTTPESEQALQRW K S A N K S 5 1 3 2 0 1 1 0 0 2 1 1 0 1 0 2 0 0 0 1 0 0 21 1 1 5 2246.1291 P33030 P33030 133 153 yeiR Uncharacterized protein YeiR yes yes 3 7.6462E-14 82.367 By MS/MS By MS/MS 1 1 28002000 14249000 13753000 0 0 0 0 0 0 3917 343 4306 23398;23399 17709;17710 17710 2 14249000 14078000 0 0 0 0 0 0 SATDAANAAQNR YSTEMMNVISAGLDKSATDAANAAQNRAST LDKSATDAANAAQNRASTTMDVQSAADDTG K S A N R A 5 1 2 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 12 0 0 5 1188.5483 P0A903 P0A903 212 223 bamC Outer membrane protein assembly factor BamC yes yes 2 0.0011892 65.305 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7952300 2887800 2284600 0 0 1617300 1162500 0 0 3918 156 4307 23400;23401;23402;23403 17711;17712;17713;17714 17712 4 2887800 2338600 0 0 1951000 1287800 0 0 SATPAQAQAVHK AVIAYEPVWAIGTGKSATPAQAQAVHKFIR TGKSATPAQAQAVHKFIRDHIAKVDANIAE K S A H K F 4 0 0 0 0 2 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 12 0 0 5 1207.6309 P0A858 P0A858 177 188 tpiA Triosephosphate isomerase yes yes 3 3.9153E-14 113.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 144360000 34110000 44794000 0 0 35689000 29769000 0 0 3919 139 4308 23404;23405;23406;23407 17715;17716;17717;17718 17718 4 34110000 45851000 0 0 43052000 32977000 0 0 SAVASEVAHQLHAAFLDGDFLHPR DHHIYVLMGVSGSGKSAVASEVAHQLHAAF QLHAAFLDGDFLHPRRNIEKMASGEPLNDD K S A P R R 5 1 0 2 0 1 1 1 3 0 3 0 0 2 1 2 0 0 0 2 0 0 24 0 1 6 2587.2932 P46859 P46859 22 45 gntK Thermoresistant gluconokinase yes yes 3;4 1.1154E-184 210.74 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 507060000 77742000 79120000 0 0 149490000 200700000 0 0 3920 372 4309 23408;23409;23410;23411;23412;23413;23414;23415;23416;23417 17719;17720;17721;17722;17723;17724;17725;17726;17727 17725 9 84072000 80987000 0 0 180330000 222330000 0 0 SAVLTAEQALK ______________________________ ______________________________ M S A L K L 3 0 0 0 0 1 1 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 11 0 1 3 1129.6343 P0ADP2 P0ADP2 2 12 yigI Uncharacterized protein YigI yes yes 2 1.2617E-09 81.338 By MS/MS 1 0 0 0 0 0 0 0 0 0 3921 224 4310 23418 17728 17728 1 0 0 0 0 0 0 0 0 SAVNAIETR IVPVPIASYLLNEKRSAVNAIETRQDGVRC LLNEKRSAVNAIETRQDGVRCVIVPNDQME R S A T R Q 2 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 0 1 2 959.50361 P21513 P21513 457 465 rne Ribonuclease E yes yes 2 0.0020954 75.378 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32365000 8374700 8715500 0 0 6857900 8416600 0 0 3922 297 4311 23419;23420;23421;23422 17729;17730;17731;17732 17731 4 8374700 8921200 0 0 8272800 9323800 0 0 SCQISCK ______________________________ ______________________________ M S C C K S 0 0 0 0 2 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 7 0 0 0 881.37352 CON__P35908v2;CON__P35908 CON__P35908v2 2 8 yes no 2 0.0069101 39.663 By matching By MS/MS 1 1 3077800 1674400 0 0 0 0 1403400 0 0 + 3923 16 4312 23423;23424 17733 17733 1 1674400 0 0 0 0 1554600 0 0 SDAEAIKVRHGCA NVVTSDIAYAFGTPPSDAEAIKVRHGCALG PPSDAEAIKVRHGCALGSIVGKDESVEVPS P S D C A L 3 1 0 1 1 0 1 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 13 2 1 2 1412.683 P0ABH0 P0ABH0 252 264 ftsA Cell division protein FtsA yes yes 3 0.012845 45.077 By MS/MS By MS/MS By MS/MS 1 1 1 3871800 1347500 988360 0 0 0 1536000 0 0 3924 199 4313 23425;23426;23427 17734 17734 1 8134000 5915400 0 0 0 2189600 0 0 SDFQVDRFDKLA YLFIDRDGTLISEPPSDFQVDRFDKLAFEP EPPSDFQVDRFDKLAFEPGVIPELLKLQKA P S D L A F 1 1 0 3 0 1 0 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 12 2 0 0 1439.7045 P06987 P06987 20 31 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2;3 3.6737E-09 115 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 343050000 22616000 27925000 0 0 204530000 87980000 0 0 3925 55 4314 23428;23429;23430;23431;23432;23433;23434;23435 17735;17736;17737;17738;17739;17740;17741 17741 7 136520000 167130000 0 0 291190000 125420000 0 0 SDGTVINNE MENAHLVLSAASFAESDGTVINNEGRAQRF AASFAESDGTVINNEGRAQRFFQVYDPAYY E S D N E G 0 0 2 1 0 0 1 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 0 0 0 947.4196 P33602 P33602 616 624 nuoG NADH-quinone oxidoreductase subunit G yes yes 1 0.017422 45.081 By MS/MS 1 1790500 0 1790500 0 0 0 0 0 0 3926 345 4315 23436 17742 17742 1 0 27305000 0 0 0 0 0 0 SDLALMTNAGTE SLAICNVPGSSLVRESDLALMTNAGTEIGV VRESDLALMTNAGTEIGVASTKAFTTQLTV E S D T E I 2 0 1 1 0 0 1 1 0 0 2 0 1 0 0 1 2 0 0 0 0 0 12 0 0 2 1221.5547 P17169 P17169 386 397 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 2.1623E-17 120.15 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 1 1 2 261930000 34683000 39746000 51470000 41058000 7750800 0 18264000 68959000 3927 288 4316;4317 23437;23438;23439;23440;23441;23442;23443;23444;23445;23446;23447;23448;23449 17743;17744;17745;17746;17747;17748;17749;17750 17749 243 7 532890000 606130000 437330000 311280000 119330000 0 140560000 395750000 SDLEMQYETLQEELMALK INGLRQVLDNLTMEKSDLEMQYETLQEELM EMQYETLQEELMALKKNHKEEMSQLTGQNS K S D L K K 1 0 0 1 0 2 4 0 0 0 4 1 2 0 0 1 1 0 1 0 0 0 18 0 4 1 2170.0174 CON__P35527 CON__P35527 272 289 yes yes 2 9.6756E-44 139.46 By matching By matching By MS/MS By MS/MS 1 1 1 1 99929000 15675000 7159600 0 0 24666000 52429000 0 0 + 3928 15 4318;4319 23450;23451;23452;23453 17751;17752 17752 21;22 2 15675000 7328600 0 0 29754000 58080000 0 0 SDLEMQYETLQEELMALKK INGLRQVLDNLTMEKSDLEMQYETLQEELM MQYETLQEELMALKKNHKEEMSQLTGQNSG K S D K K N 1 0 0 1 0 2 4 0 0 0 4 2 2 0 0 1 1 0 1 0 0 0 19 1 4 1 2298.1123 CON__P35527 CON__P35527 272 290 yes yes 3 6.6729E-107 183.6 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 880340000 136150000 117280000 0 0 262770000 364140000 0 0 + 3929 15 4320;4321;4322 23454;23455;23456;23457;23458;23459;23460;23461;23462;23463;23464;23465;23466 17753;17754;17755;17756;17757;17758;17759;17760;17761;17762;17763 17755 21;22 10 136150000 120050000 0 0 382670000 403390000 0 0 SDNAQLTGLCDR ______________________________ ______________________________ M S D D R F 1 1 1 2 1 1 0 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 12 0 0 1 1348.6041 P30014 P30014 2 13 rnt Ribonuclease T yes yes 2 3.8551E-07 97.813 By MS/MS By MS/MS By MS/MS 1 2 1 28700000 11199000 0 0 0 8805500 8695600 0 0 3930 330 4323 23467;23468;23469;23470 17764;17765;17766 17764 3 11199000 0 0 0 10722000 9632700 0 0 SDNAQLTGLCDRFRGFYPVVIDVE ______________________________ CDRFRGFYPVVIDVETAGFNAKTDALLEIA M S D V E T 1 2 1 3 1 1 1 2 0 1 2 0 0 2 1 1 1 0 1 3 0 0 24 2 0 2 2770.3385 P30014 P30014 2 25 rnt Ribonuclease T yes yes 3 4.5821E-05 49.638 By MS/MS By MS/MS 1 1 24717000 0 0 0 0 10970000 13747000 0 0 3931 330 4324 23471;23472 17767 17767 1 0 0 0 0 168890000 208360000 0 0 SDVKRLQNA LLPDGASEHDYSLRPSDVKRLQNADLVVWV DYSLRPSDVKRLQNADLVVWVGPEMEAFMQ P S D N A D 1 1 1 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 9 2 0 0 1029.5567 P39172 P39172 67 75 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 0.01649 44.447 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 67552000 3405900 4157700 11233000 12584000 0 3256800 15973000 16942000 3932 361 4325 23473;23474;23475;23476;23477;23478;23479 17768 17768 0 20560000 24884000 95445000 95404000 0 4642500 122930000 97228000 SDVLFNFNK PAPAPEVQTKHFTLKSDVLFNFNKATLKPE KHFTLKSDVLFNFNKATLKPEGQAALDQLY K S D N K A 0 0 2 1 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 9 0 0 0 1082.5397 P0A910 P0A910 219 227 ompA Outer membrane protein A yes yes 2 0.01905 44.961 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 56568000 0 0 1730900 2307600 32626000 19903000 0 0 3933 158 4326 23480;23481;23482;23483 17769 17769 1 0 0 14707000 17495000 39357000 22048000 0 0 SDVQAAKDDAAR NAKVDQLSNDVNAMRSDVQAAKDDAARANQ AMRSDVQAAKDDAARANQRLDNMATKYRK_ R S D A R A 4 1 0 3 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 12 1 0 4 1245.5949 P69776 P69776 53 64 lpp Major outer membrane lipoprotein Lpp yes yes 2;3 0.00018098 65.627 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 23669000 7095500 9981800 0 0 2935800 3656400 0 0 3934 404 4327 23484;23485;23486;23487;23488;23489;23490;23491 17770;17771;17772;17773;17774 17770 5 7095500 10217000 0 0 3541500 4050500 0 0 SEAIRDILR ETLDSLSQRRGYNNRSEAIRDILRSALAQE RGYNNRSEAIRDILRSALAQEATQQHGTQG R S E L R S 1 2 0 1 0 0 1 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 9 1 1 1 1071.6037 P0A6Z6 P0A6Z6 29 37 nikR Nickel-responsive regulator yes yes 2 0.0027024 99.802 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 93298000 30170000 31132000 0 0 15549000 16447000 0 0 3935 89 4328 23492;23493;23494;23495 17775;17776;17777;17778 17778 4 30170000 31867000 0 0 18757000 18220000 0 0 SEALKILNNIRTLRAQARE ______________________________ KILNNIRTLRAQARECTLETLEEMLEKLEV M S E R E C 3 3 2 0 0 1 2 0 0 2 3 1 0 0 0 1 1 0 0 0 0 0 19 4 1 3 2195.2498 P0ACF8 P0ACF8 2 20 hns DNA-binding protein H-NS yes yes 3;4 9.0208E-11 72.433 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 59380000 741760 895490 0 0 24258000 33486000 0 0 3936 210 4329 23496;23497;23498;23499;23500;23501 17779;17780;17781;17782;17783 17782 5 11397000 13656000 0 0 373470000 507520000 0 0 SEALKILNNIRTLRAQARECTLE ______________________________ NIRTLRAQARECTLETLEEMLEKLEVVVNE M S E L E T 3 3 2 0 1 1 3 0 0 2 4 1 0 0 0 1 2 0 0 0 0 0 23 4 2 3 2698.4548 P0ACF8 P0ACF8 2 24 hns DNA-binding protein H-NS yes yes 4 0.0098856 19.044 By MS/MS By MS/MS 1 1 6961900 0 0 0 0 3230800 3731100 0 0 3937 210 4330 23502;23503 17784;17785 17785 2 0 0 0 0 49740000 56551000 0 0 SEALLNAGR ______________________________ ______________________________ M S E G R Q 2 1 1 0 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1 2 929.49304 P17115 P17115 2 10 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 2 0.00027664 77.282 By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 15624000 6061700 5988700 0 0 1870500 0 1703000 0 3938 287 4331 23504;23505;23506;23507;23508 17786;17787;17788;17789 17789 4 6061700 6130100 0 0 2256400 0 13107000 0 SEALLNAGRQTLMLE ______________________________ SEALLNAGRQTLMLELQEASRLPERLGDDF M S E L E L 2 1 1 0 0 1 2 1 0 0 4 0 1 0 0 1 1 0 0 0 0 0 15 1 1 2 1644.8505 P17115 P17115 2 16 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 2 0.016749 31.185 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 15265000 2051200 1789600 1584600 1721700 2203100 1512500 1869700 2532500 3939 287 4332 23509;23510;23511;23512;23513;23514;23515;23516 17790 17790 237 1 31516000 27292000 13464000 13053000 33920000 22925000 14390000 14534000 SEDVFVPK MYYTGKNPLAKIGYKSEDVFVPKGDKQRRL LAKIGYKSEDVFVPKGDKQRRLHKALLRYH K S E P K G 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 1 0 0 0 2 0 0 8 0 1 1 919.4651 Q46861 Q46861 625 632 ygiQ UPF0313 protein YgiQ yes yes 2 0.0024664 81.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42774000 13660000 0 0 0 15021000 14092000 0 0 3940 441 4333 23517;23518;23519;23520 17791;17792;17793;17794 17791 4 13660000 0 0 0 18120000 15611000 0 0 SEEEFAERKRP SYMLPKLHEEAMALPSEEEFAERKRPEQPA MALPSEEEFAERKRPEQPALATFAMPDVPP P S E R P E 1 2 0 0 0 0 4 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 11 3 4 1 1376.6684 P21513 P21513 514 524 rne Ribonuclease E yes yes 3 0.00049988 76.465 By MS/MS By MS/MS By MS/MS 1 1 1 12105000 3047500 2328600 0 0 0 6728800 0 0 3941 297 4334 23521;23522;23523 17795;17796;17797;17798 17795 4 18396000 13937000 0 0 0 9591800 0 0 SEFAENDAYVHATPLIR AEAPAAAPAAKAEGKSEFAENDAYVHATPL FAENDAYVHATPLIRRLAREFGVNLAKVKG K S E I R R 3 1 1 1 0 0 2 0 1 1 1 0 0 1 1 1 1 0 1 1 0 0 17 0 2 4 1931.9377 P06959 P06959 318 334 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 3 2.2736E-16 93.754 By matching By MS/MS By matching By MS/MS 1 1 1 1 32749000 7204000 6922200 0 0 4542600 14080000 0 0 3942 53 4335 23524;23525;23526;23527 17799;17800 17800 2 7204000 7085600 0 0 5479800 15598000 0 0 SEIDNVK KIEISELNRVIQRLRSEIDNVKKQISNLQQ NRVIQRLRSEIDNVKKQISNLQQSISDAEQ R S E V K K 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 7 0 1 0 803.4025 CON__P04264 CON__P04264 410 416 no no 2 0.0071499 73.039 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 12213000000 0 0 3974800000 3704900000 28721000 24460000 4480000000 0 + 3943 9 4336 23528;23529;23530;23531;23532 17801;17802 17802 1 0 0 33773000000 28089000000 34647000 27096000 34479000000 0 SEIDNVKK KIEISELNRVIQRLRSEIDNVKKQISNLQQ RVIQRLRSEIDNVKKQISNLQQSISDAEQR R S E K K Q 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 8 1 1 0 931.49746 CON__P04264 CON__P04264 410 417 no no 2 4.1618E-25 147.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 100260000 21002000 20738000 0 0 30170000 28351000 0 0 + 3944 9 4337 23533;23534;23535;23536 17803;17804;17805 17805 3 21002000 21227000 0 0 36394000 31406000 0 0 SEIGRTTDPVRMYMRE EDAAEAAAQVLSSVESEIGRTTDPVRMYMR EIGRTTDPVRMYMREMGTVELLTREGEIDI E S E R E M 0 3 0 1 0 0 2 1 0 1 0 0 2 0 1 1 2 0 1 1 0 0 16 3 1 1 1939.9244 P00579 P00579 89 104 rpoD RNA polymerase sigma factor RpoD yes yes 3 0.022579 20.093 By MS/MS By MS/MS By MS/MS 1 1 1 9838900 0 4882700 0 0 2216700 2739400 0 0 3945 27 4338 23537;23538;23539 17806 17806 1 0 74462000 0 0 34128000 41520000 0 0 SEISELR NREVATNSELVQSGKSEISELRRTMQNLEI SELVQSGKSEISELRRTMQNLEIELQSQLS K S E L R R 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 7 0 2 0 832.42905 CON__P02533 CON__P02533 329 335 no no 2 4.5378E-11 128.48 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 46561000 5610400 4658100 0 0 16938000 16304000 0 3050900 + 3946 4 4339 23540;23541;23542;23543;23544 17807;17808;17809 17808 3 5610400 4768000 0 0 20432000 18061000 0 17509000 SEISELRR NREVATNSELVQSGKSEISELRRTMQNLEI ELVQSGKSEISELRRTMQNLEIELQSQLSM K S E R R T 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 8 1 2 0 988.53016 CON__P02533 CON__P02533 329 336 no no 2 0.00071241 100.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27916000 6598400 6839800 0 0 7679700 6798600 0 0 + 3947 4 4340 23545;23546;23547;23548 17810;17811;17812;17813 17810 4 6598400 7001200 0 0 9264000 7531300 0 0 SEITDEEYKEFYK WEKINKAQALWTRNKSEITDEEYKEFYKHI NKSEITDEEYKEFYKHIAHDFNDPLTWSHN K S E Y K H 0 0 0 1 0 0 4 0 0 1 0 2 0 1 0 1 1 0 2 0 0 0 13 1 4 0 1679.7566 P0A6Z3 P0A6Z3 239 251 htpG Chaperone protein HtpG yes yes 2;3 1.3849E-10 104.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 68325000 12611000 18514000 0 0 16527000 20672000 0 0 3948 88 4341 23549;23550;23551;23552;23553;23554;23555;23556 17814;17815;17816;17817;17818 17817 5 12611000 18951000 0 0 19937000 22900000 0 0 SEITELR TTEIDNNIEQISSYKSEITELRRNVQALEI IEQISSYKSEITELRRNVQALEIELQSQLA K S E L R R 0 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 7 0 2 0 846.4447 CON__P13645;CON__P02535-1 CON__P13645 363 369 yes no 2 5.851E-25 150.02 By MS/MS By MS/MS 1 1 337210000 0 0 0 0 173930000 163280000 0 0 + 3949 12 4342 23557;23558 17819;17820 17819 2 0 0 0 0 209820000 180870000 0 0 SEITELRR TTEIDNNIEQISSYKSEITELRRNVQALEI EQISSYKSEITELRRNVQALEIELQSQLAL K S E R R N 0 2 0 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 8 1 2 0 1002.5458 CON__P13645;CON__P02535-1 CON__P13645 363 370 yes no 2 1.6421E-11 127.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 218920000 49144000 50350000 0 0 59738000 59682000 0 0 + 3950 12 4343 23559;23560;23561;23562 17821;17822;17823;17824 17824 3 49144000 51539000 0 0 72062000 66115000 0 0 SEKPAIVGEPEMPSTIADVAQEK PDRESIGREKAGIFRSEKPAIVGEPEMPST EPEMPSTIADVAQEKGALLQRRGVEWNYSV R S E E K G 3 0 0 1 0 1 4 1 0 2 0 2 1 0 3 2 1 0 0 2 0 0 23 1 4 6 2425.2047 P08192 P08192 194 216 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 3 7.1755E-08 62.677 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 82696000 23638000 18832000 0 0 19889000 20337000 0 0 3951 59 4344 23563;23564;23565;23566 17825;17826;17827;17828;17829 17829 5 23638000 19277000 0 0 23992000 22529000 0 0 SELALAR S E A R 2 1 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 7 0 1 2 758.42865 REV__P75742 yes yes 2 0.0017489 99.511 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 117810000 26059000 28246000 0 0 25862000 37642000 0 0 + 3952 448 4345 23567;23568;23569;23570;23571;23572;23573;23574 17830;17831;17832;17833 17833 4 26059000 28913000 0 0 31197000 41699000 0 0 SELEAFEVALENVRPTVEVK IVYSALETLAQRSGKSELEAFEVALENVRP FEVALENVRPTVEVKSRRVGGSTYQVPVEV K S E V K S 2 1 1 0 0 0 5 0 0 0 2 1 0 1 1 1 1 0 0 4 0 0 20 1 5 3 2258.1794 P02359 P02359 57 76 rpsG 30S ribosomal protein S7 yes yes 3 1.8213E-27 108.56 By matching By matching By MS/MS By MS/MS 1 1 1 1 79170000 5190200 5896700 0 0 28389000 39695000 0 0 3953 36 4346 23575;23576;23577;23578 17834 17834 1 5190200 6035900 0 0 34245000 43973000 0 0 SELVNVAK VTITIAADSIETAVKSELVNVAKKVRIDGF SIETAVKSELVNVAKKVRIDGFRKGKVPMN K S E A K K 1 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 8 0 1 1 858.48108 P0A850 P0A850 30 37 tig Trigger factor yes yes 2 0.0022081 85.265 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 52193000 10405000 10977000 0 12508000 10142000 8161500 0 0 3954 137 4347 23579;23580;23581;23582;23583 17835;17836;17837;17838 17835 4 10405000 11236000 0 94830000 12234000 9041100 0 0 SEMTPREIVSE ______________________________ ______________________________ M S E S E L 0 1 0 0 0 0 3 0 0 1 0 0 1 0 1 2 1 0 0 1 0 0 11 1 2 1 1276.5969 P0A6H5 P0A6H5 2 12 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0014686 72.643 By MS/MS By MS/MS By matching 1 1 1 10877000 0 0 3825600 5162100 0 0 1889800 0 3955 71 4348 23584;23585;23586 17839;17840 17839 2 0 0 32505000 39136000 0 0 14545000 0 SEQHGSSSGLSSSYGQHGSGSHQSSGHGR SGYRKHGSRSGQSSRSEQHGSSSGLSSSYG GQHGSGSHQSSGHGRQGSGSGHSPSRVRHG R S E G R Q 0 1 0 0 0 3 1 7 4 0 1 0 0 0 0 11 0 0 1 0 0 0 29 0 1 0 2868.2156 CON__Q86YZ3 CON__Q86YZ3 739 767 yes yes 5 0.00045552 32.434 By MS/MS By MS/MS 1 1 4456100 1511100 0 0 0 2945000 0 0 0 + 3956 22 4349 23587;23588 17841 17841 1 1511100 0 0 0 3552600 0 0 0 SEQLPTR EGDTLAACLEDYFMRSEQLPTRLFIRTGDV CLEDYFMRSEQLPTRLFIRTGDVDGKPAAG R S E T R L 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 7 0 1 1 829.42938 P0A6Y5 P0A6Y5 147 153 hslO 33 kDa chaperonin yes yes 2 0.0027745 85.265 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 227580000 17297000 15054000 38897000 35427000 0 0 49871000 71036000 3957 85 4350 23589;23590;23591;23592;23593;23594 17842;17843 17843 2 17297000 15409000 330500000 268590000 0 0 383820000 407660000 SEQYGVQQA QLPPPIQNMDQFWSPSEQYGVQQALSMSLV DQFWSPSEQYGVQQALSMSLVGDKAKVRHG P S E Q A L 1 0 0 0 0 3 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 9 0 1 0 1008.4512 P0ADV5 P0ADV5 271 279 yhbW Uncharacterized protein YhbW yes yes 2 0.014119 48.561 By matching By MS/MS 1 1 19246000 0 0 0 0 11143000 8103500 0 0 3958 226 4351 23595;23596 17844 17844 0 0 0 0 0 15864000 11552000 0 0 SESAIPAEQFK VAIDKDVVLVDAGLKSESAIPAEQFKNAQG AGLKSESAIPAEQFKNAQGELEIQVGDEVD K S E F K N 2 0 0 0 0 1 2 0 0 1 0 1 0 1 1 2 0 0 0 0 0 0 11 0 2 3 1205.5928 P0AG67 P0AG67 44 54 rpsA 30S ribosomal protein S1 yes yes 2 0.00011345 87.895 By MS/MS By MS/MS 1 1 89885000 44367000 45518000 0 0 0 0 0 0 3959 261 4352 23597;23598 17845;17846 17845 2 44367000 46592000 0 0 0 0 0 0 SETKNELEDLLEK ______________________________ ______________________________ M S E E K A 0 0 1 1 0 0 4 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 13 1 4 0 1546.7726 P0AFZ1 P0AFZ1 2 14 sseB Protein SseB yes yes 3 1.0415E-05 72.891 By MS/MS By MS/MS By matching 1 1 1 24994000 14568000 7019800 0 0 3406600 0 0 0 3960 253 4353 23599;23600;23601 17847;17848 17848 2 14568000 7185500 0 0 4109300 0 0 0 SETKNELEDLLEKA ______________________________ MSETKNELEDLLEKAATEPAHRPAFFRTLL M S E K A A 1 0 1 1 0 0 4 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 14 2 4 0 1617.8097 P0AFZ1 P0AFZ1 2 15 sseB Protein SseB yes yes 3 0.001341 43.813 By MS/MS By MS/MS 1 1 2062500 0 0 0 0 907330 1155100 0 0 3961 253 4354 23602;23603 17849 17849 1 0 0 0 0 1291800 1646600 0 0 SETLAMIIDGR ETVREARAEAFVTMRSETLAMIIDGRHHKG VTMRSETLAMIIDGRHHKGDVFATARIAGI R S E G R H 1 1 0 1 0 0 1 1 0 2 1 0 1 0 0 1 1 0 0 0 0 0 11 0 1 1 1204.6122 P0A738 P0A738 38 48 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 2.1474E-07 106.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 135950000 40632000 29703000 0 0 34301000 31314000 0 0 3962 93 4355;4356 23604;23605;23606;23607;23608;23609;23610;23611;23612 17850;17851;17852;17853;17854;17855;17856 17852 105 7 40632000 30404000 0 0 41568000 34689000 0 0 SEVNAHP GTGIAHTRWATHGEPSEVNAHPHVSEHIVV RWATHGEPSEVNAHPHVSEHIVVVHNGIIE P S E H P H 1 0 1 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 7 0 1 1 752.34532 P17169 P17169 82 88 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.0007761 77.944 By MS/MS 3 90685000 0 0 0 0 0 90685000 0 0 3963 288 4357 23613;23614;23615 17857;17858;17859;17860 17859 4 0 0 0 0 0 129270000 0 0 SFAQLFE ______________________________ ______________________________ E S F F E E 1 0 0 0 0 1 1 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 7 0 0 1 840.40177 P0AG67 P0AG67 4 10 rpsA 30S ribosomal protein S1 yes yes 1 0.021387 41.502 By matching By MS/MS By matching By matching 1 1 1 1 8122100 2507200 2689200 0 0 0 1298500 1627200 0 3964 261 4358 23616;23617;23618;23619 17861 17861 0 38523000 41010000 0 0 0 19681000 12523000 0 SFAQLFEE ______________________________ ______________________________ E S F E E S 1 0 0 0 0 1 2 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 8 0 1 1 969.44436 P0AG67 P0AG67 4 11 rpsA 30S ribosomal protein S1 yes yes 1 4.5782E-07 92.467 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31022000 7392200 8816800 0 0 0 0 6822000 7990900 3965 261 4359 23620;23621;23622;23623 17862;17863;17864;17865 17862 2 113580000 134460000 0 0 0 0 52504000 45859000 SFDIYSR ALVPMVIEQTSRGERSFDIYSRLLKERVIF EQTSRGERSFDIYSRLLKERVIFLTGQVED R S F S R L 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 0 7 0 0 0 886.41848 P0A6G7 P0A6G7 30 36 clpP ATP-dependent Clp protease proteolytic subunit yes yes 2 0.0041496 50.127 By MS/MS 1 0 0 0 0 0 0 0 0 0 3966 69 4360 23624 17866 17866 1 0 0 0 0 0 0 0 0 SFDSLGLSP ______________________________ ______________________________ M S F S P D 0 0 0 1 0 0 0 1 0 0 2 0 0 1 1 3 0 0 0 0 0 0 9 0 0 0 921.44436 P25888 P25888 2 10 rhlE ATP-dependent RNA helicase RhlE yes yes 1 5.8588E-08 119.57 By matching By matching By MS/MS By MS/MS 1 1 1 1 38075000 4981800 4258200 0 0 11045000 17790000 0 0 3967 318 4361 23625;23626;23627;23628 17867;17868 17867 2 30073000 25485000 0 0 15725000 25359000 0 0 SFDSLGLSPDILR ______________________________ ______________________________ M S F L R A 0 1 0 2 0 0 0 1 0 1 3 0 0 1 1 3 0 0 0 0 0 0 13 0 0 1 1418.7405 P25888 P25888 2 14 rhlE ATP-dependent RNA helicase RhlE yes yes 2 1.916E-70 177.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 685990000 206610000 175400000 0 0 135010000 168970000 0 0 3968 318 4362 23629;23630;23631;23632 17869;17870;17871;17872 17872 4 206610000 179540000 0 0 162860000 187180000 0 0 SFDSLGLSPDILRAVAE ______________________________ DSLGLSPDILRAVAEQGYREPTPIQQQAIP M S F A E Q 2 1 0 2 0 0 1 1 0 1 3 0 0 1 1 3 0 0 0 1 0 0 17 1 0 3 1788.9258 P25888 P25888 2 18 rhlE ATP-dependent RNA helicase RhlE yes yes 2 7.6298E-171 214 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 421380000 4106700 6769000 0 0 185790000 203920000 894440 19899000 3969 318 4363 23633;23634;23635;23636;23637;23638 17873;17874;17875 17874 3 63099000 103230000 0 0 2860400000 3090700000 6883800 114200000 SFEKHPLRHHFPP ENEASIEELGEMLLASFEKHPLRHHFPPFA LASFEKHPLRHHFPPFAGFRVVESSSYYGK A S F P P F 0 1 0 0 0 0 1 0 3 0 1 1 0 2 3 1 0 0 0 0 0 0 13 2 1 2 1627.8372 P77398 P77398 584 596 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.019996 38.021 By MS/MS By MS/MS 1 1 14804000 0 0 0 0 7124900 7678800 0 0 3970 432 4364 23639;23640 17876 17876 1 0 0 0 0 10144000 10946000 0 0 SFESDAEAK EIPIDAPGIDALLRRSFESDAEAKLVHDLR DALLRRSFESDAEAKLVHDLREDGFLTLGL R S F A K L 2 0 0 1 0 0 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 9 0 2 2 982.42436 P63417 P63417 21 29 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 2 0.0021093 78.149 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 114070000 25670000 29258000 0 0 32456000 26685000 0 0 3971 394 4365 23641;23642;23643;23644 17877;17878;17879;17880 17878 4 25670000 29949000 0 0 39151000 29561000 0 0 SFFDGVK SFGGPTGEHNSPRSKSFFDGVKKFFDDLTR EHNSPRSKSFFDGVKKFFDDLTR_______ K S F V K K 0 0 0 1 0 0 0 1 0 0 0 1 0 2 0 1 0 0 0 1 0 0 7 0 0 0 798.3912 P08622 P08622 362 368 dnaJ Chaperone protein DnaJ yes yes 2 0.0028379 76.847 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 192570000 35481000 39730000 0 0 48448000 68914000 0 0 3972 61 4366 23645;23646;23647;23648 17881;17882;17883;17884 17882 4 35481000 40668000 0 0 58443000 76341000 0 0 SFFDGVKK SFGGPTGEHNSPRSKSFFDGVKKFFDDLTR HNSPRSKSFFDGVKKFFDDLTR________ K S F K K F 0 0 0 1 0 0 0 1 0 0 0 2 0 2 0 1 0 0 0 1 0 0 8 1 0 0 926.48617 P08622 P08622 362 369 dnaJ Chaperone protein DnaJ yes yes 2 0.00090306 98.418 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 151470000 55209000 47704000 0 0 24887000 23674000 0 0 3973 61 4367 23649;23650;23651;23652 17885;17886;17887;17888;17889 17886 5 55209000 48830000 0 0 30021000 26225000 0 0 SFGAPTITK KVTLGPKGRNVVLDKSFGAPTITKDGVSVA NVVLDKSFGAPTITKDGVSVAREIELEDKF K S F T K D 1 0 0 0 0 0 0 1 0 1 0 1 0 1 1 1 2 0 0 0 0 0 9 0 0 2 920.49673 P0A6F5 P0A6F5 43 51 groL 60 kDa chaperonin yes yes 2 0.00055973 95.502 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 2130100000 648050000 391800000 0 0 527630000 551670000 4301300 6634500 3974 68 4368 23653;23654;23655;23656;23657;23658;23659 17890;17891;17892;17893 17890 4 648050000 401050000 0 0 636480000 611130000 33104000 38075000 SFGEYYSHP YQERVEGNKVRERSPSFGEYYSHPRLFWLS VRERSPSFGEYYSHPRLFWLSQTPFEQRHI P S F H P R 0 0 0 0 0 0 1 1 1 0 0 0 0 1 1 2 0 0 2 0 0 0 9 0 1 0 1085.4454 P21179 P21179 500 508 katE Catalase HPII yes yes 2 0.020562 58.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54395000 3877900 3156100 0 0 33397000 13965000 0 0 3975 293 4369 23660;23661;23662;23663 17894 17894 1 23409000 18889000 0 0 47546000 19906000 0 0 SFHDLTEA PLGLWQQDKVADLDPSFHDLTEADFQETFN KVADLDPSFHDLTEADFQETFNVGSFASGK P S F E A D 1 0 0 1 0 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 1 0 918.40831 P0AFG3 P0AFG3 126 133 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0043269 107.74 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30934000 5280400 3859000 0 0 8490800 13304000 0 0 3976 246 4370 23664;23665;23666;23667 17895;17896 17895 2 31875000 23096000 0 0 12088000 18964000 0 0 SFIDPEVLR DETPEKADHGGISGKSFIDPEVLRRQRAEE GGISGKSFIDPEVLRRQRAEETRVYGENAC K S F L R R 0 1 0 1 0 0 1 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 9 0 1 1 1074.571 P0AGJ5 P0AGJ5 93 101 yfiF Uncharacterized tRNA/rRNA methyltransferase YfiF yes yes 2 0.0055037 37.727 By MS/MS 1 0 0 0 0 0 0 0 0 0 3977 265 4371 23668 17897 17897 1 0 0 0 0 0 0 0 0 SFLELIALDQPGLLAR VETEVTFLPTHTDRKSFLELIALDQPGLLA FLELIALDQPGLLARVGKIFADLGISLHGA K S F A R V 2 1 0 1 0 1 1 1 0 1 5 0 0 1 1 1 0 0 0 0 0 0 16 0 1 3 1754.9931 P27249 P27249 815 830 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 8.651E-116 190.15 By MS/MS By MS/MS 1 1 43589000 0 0 0 0 21505000 22084000 0 0 3978 320 4372 23669;23670 17898;17899 17898 2 0 0 0 0 25941000 24465000 0 0 SFLITNPGSNQGP KVTFKEDNSLPVRKPSFLITNPGSNQGPRF KPSFLITNPGSNQGPRFAGSPLGHEFTSLV P S F G P R 0 0 2 0 0 1 0 2 0 1 1 0 0 1 2 2 1 0 0 0 0 0 13 0 0 1 1330.6517 P35340 P35340 64 76 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.015882 48.283 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23225000 1364700 1323000 0 0 9844500 10693000 0 0 3979 348 4373 23671;23672;23673;23674 17900;17901 17901 2 8238100 7918000 0 0 14016000 15243000 0 0 SFSTASAITPSVSR MSRQSSVSFRSGGSRSFSTASAITPSVSRT RSFSTASAITPSVSRTSFTSVSRSGGGGGG R S F S R T 2 1 0 0 0 0 0 0 0 1 0 0 0 1 1 5 2 0 0 1 0 0 14 0 0 3 1409.7151 CON__P13647 CON__P13647 16 29 no no 2 0.0056349 61.435 By matching By MS/MS By matching 1 1 1 11348000 3549400 0 0 0 4011900 3786800 0 0 + 3980 13 4374 23675;23676;23677 17902 17902 1 3549400 0 0 0 4839600 4194900 0 0 SFTFVTK KGLPIPVVITVYADRSFTFVTKTPPAAVLL VITVYADRSFTFVTKTPPAAVLLKKAAGIK R S F T K T 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 1 2 0 0 1 0 0 7 0 0 0 828.43815 P0A7J7 P0A7J7 66 72 rplK 50S ribosomal protein L11 yes yes 2 0.0098526 56.122 By matching By MS/MS By matching 1 1 1 57285000 14958000 21672000 0 0 0 20655000 0 0 3981 107 4375 23678;23679;23680 17903 17903 1 14958000 22183000 0 0 0 22881000 0 0 SGAKGPAAGNVTSL YKSLDEGQKVSFTIESGAKGPAAGNVTSL_ ESGAKGPAAGNVTSL_______________ E S G S L - 3 0 1 0 0 0 0 3 0 0 1 1 0 0 1 2 1 0 0 1 0 0 14 1 0 4 1228.6412 P0A9X9 P0A9X9 57 70 cspA Cold shock protein CspA yes yes 2 9.1418E-16 99.283 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 55907000 3397700 3178500 10047000 9275300 2792100 2643700 10652000 13921000 3982 181 4376 23681;23682;23683;23684;23685;23686;23687;23688 17904;17905;17906;17907;17908;17909 17909 6 52204000 48472000 85370000 70321000 42987000 40069000 81980000 79889000 SGASVGIDDMVIPEK FADQIMYTGFAYAARSGASVGIDDMVIPEK SGASVGIDDMVIPEKKHEIISEAEAEVAEI R S G E K K 1 0 0 2 0 0 1 2 0 2 0 1 1 0 1 2 0 0 0 2 0 0 15 0 1 2 1516.7443 P0A8T7 P0A8T7 635 649 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.021955 33.409 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14327000 3884200 2425400 0 0 3520200 4497100 0 0 3983 153 4377 23689;23690;23691;23692 17910 17910 1 3884200 2482600 0 0 4246400 4981800 0 0 SGASVGIDDMVIPEKK FADQIMYTGFAYAARSGASVGIDDMVIPEK GASVGIDDMVIPEKKHEIISEAEAEVAEIQ R S G K K H 1 0 0 2 0 0 1 2 0 2 0 2 1 0 1 2 0 0 0 2 0 0 16 1 1 2 1644.8393 P0A8T7 P0A8T7 635 650 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 8.947E-06 70.197 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46385000 13229000 12918000 0 0 9126500 11111000 0 0 3984 153 4378 23693;23694;23695;23696 17911;17912;17913;17914 17912 4 13229000 13223000 0 0 11009000 12309000 0 0 SGAVIESFLDKGRGP QAEVLELKAVRKGMASGAVIESFLDKGRGP SGAVIESFLDKGRGPVATVLVREGTLHKGD A S G G P V 1 1 0 1 0 0 1 3 0 1 1 1 0 1 1 2 0 0 0 1 0 0 15 2 1 1 1531.7995 P0A705;P0A705-3;P0A705-2 P0A705 566 580 infB Translation initiation factor IF-2 yes no 3 0.0071832 40.025 By MS/MS By MS/MS 1 1 2516400 0 0 0 0 1579100 937340 0 0 3985 90 4379 23697;23698 17915 17915 1 0 0 0 0 2248100 1336200 0 0 SGCAKFADIFNQVE AARQYAARHFEQFIESGCAKFADIFNQVET ESGCAKFADIFNQVETGQADYAVVPIENTS E S G V E T 2 0 1 1 1 1 1 1 0 1 0 1 0 2 0 1 0 0 0 1 0 0 14 1 0 2 1584.7242 P0A9J8 P0A9J8 134 147 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 0.008379 36.847 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 33889000 5224000 5216900 0 2336600 9438900 7495900 2255600 1921400 3986 166 4380 23699;23700;23701;23702;23703;23704;23705 17916;17917;17918;17919 17917 4 80266000 79558000 0 17715000 145320000 113610000 17360000 11027000 SGDFKVEADD MVIGPVRLLAKSGGKSGDFKVEADD_____ KSGGKSGDFKVEADD_______________ K S G D D - 1 0 0 3 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 10 1 1 1 1081.4564 P0A738 P0A738 152 161 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 8.0154E-10 117.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 129210000 37600000 36559000 0 0 26413000 28641000 0 0 3987 93 4381 23706;23707;23708;23709 17920;17921;17922;17923 17922 4 37600000 37421000 0 0 31862000 31728000 0 0 SGDPLLSPSAVATLR YQIQNVVLDTVMLAKSGDPLLSPSAVATLR SGDPLLSPSAVATLRSRLLPQVSLITPNLP K S G L R S 2 1 0 1 0 0 0 1 0 0 3 0 0 0 2 3 1 0 0 1 0 0 15 0 0 4 1482.8042 P76422 P76422 112 126 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 9.9167E-51 186.46 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 709420000 197850000 183760000 0 0 156660000 171150000 0 0 3988 425 4382 23710;23711;23712;23713 17924;17925;17926;17927;17928;17929;17930;17931 17925 8 197850000 188100000 0 0 188970000 189600000 0 0 SGDVFTQQE HAPTVETVVAGPLCESGDVFTQQEGGNVET AGPLCESGDVFTQQEGGNVETRALPEVKAG E S G Q E G 0 0 0 1 0 2 1 1 0 0 0 0 0 1 0 1 1 0 0 1 0 0 9 0 0 0 1009.4353 P00861 P00861 344 352 lysA Diaminopimelate decarboxylase yes yes 2 0.017317 58.782 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39246000 0 0 9426400 9963200 0 0 9714200 10142000 3989 28 4383 23714;23715;23716;23717 17932 17932 1 0 0 80095000 75536000 0 0 74763000 58202000 SGFIFIGPK GFLSENANFAEQVERSGFIFIGPKAETIRL AEQVERSGFIFIGPKAETIRLMGDKVSAIA R S G P K A 0 0 0 0 0 0 0 2 0 2 0 1 0 2 1 1 0 0 0 0 0 0 9 0 0 1 964.5382 P24182 P24182 98 106 accC Biotin carboxylase yes yes 2 0.0079435 52.403 By MS/MS 1 3495300 0 0 0 0 3495300 0 0 0 3990 309 4384 23718 17933 17933 1 0 0 0 0 4216400 0 0 0 SGFQYHGR ERALEKGIKDVSFDRSGFQYHGRVQALADA KDVSFDRSGFQYHGRVQALADAAREAGLQF R S G G R V 0 1 0 0 0 1 0 2 1 0 0 0 0 1 0 1 0 0 1 0 0 0 8 0 0 0 950.43586 P0C018 P0C018 95 102 rplR 50S ribosomal protein L18 yes yes 2 0.00049775 102.72 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64161000 23428000 20165000 0 0 9935100 10633000 0 0 3991 266 4385 23719;23720;23721;23722 17934;17935;17936;17937 17935 4 23428000 20641000 0 0 11985000 11779000 0 0 SGGGFSSGSAGIINYQR ______________________________ GGFSSGSAGIINYQRRTTSSSTRRSGGGGG R S G Q R R 1 1 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 0 17 0 0 1 1656.7856 CON__P04264 CON__P04264 13 29 yes yes 2 8.6987E-46 151.13 By MS/MS By MS/MS 1 1 39964000 0 0 0 0 19567000 20397000 0 0 + 3992 9 4386 23723;23724 17938;17939 17939 2 0 0 0 0 23603000 22596000 0 0 SGGGGGGGGCGGGGGVSSLR MSVRYSSSKHYSSSRSGGGGGGGGCGGGGG GGGGCGGGGGVSSLRISSSKGSLGGGFSSG R S G L R I 0 1 0 0 1 0 0 13 0 0 1 0 0 0 0 3 0 0 0 1 0 0 20 0 0 0 1548.6699 CON__P13645 CON__P13645 16 35 yes yes 2 6.8186E-05 66.285 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11233000 3782000 0 0 0 3616700 3834400 0 0 + 3993 12 4387 23725;23726;23727;23728 17940;17941;17942 17940 3 3782000 0 0 0 4362800 4247700 0 0 SGGGGGGGLGSGGSIR ______________________________ GGGGGGGLGSGGSIRSSYSRFSSSGGRGGG R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 0 16 0 0 0 1231.5905 CON__P35527 CON__P35527 14 29 yes yes 2 1.5689E-199 233.46 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 656330000 93932000 129870000 0 0 227240000 205290000 0 0 + 3994 15 4388 23729;23730;23731;23732;23733;23734;23735;23736;23737 17943;17944;17945;17946 17946 4 177650000 248570000 0 0 360120000 315890000 0 0 SGGVTFAAR TGRARSGSIKSPIWRSGGVTFAARPQDHSQ KSPIWRSGGVTFAARPQDHSQKVNKKMYRG R S G A R P 2 1 0 0 0 0 0 2 0 0 0 0 0 1 0 1 1 0 0 1 0 0 9 0 0 2 864.44537 P60723 P60723 80 88 rplD 50S ribosomal protein L4 yes yes 2 5.4558E-10 124.98 By MS/MS By matching By MS/MS By matching 1 1 1 1 151090000 37783000 40791000 0 0 35591000 36929000 0 0 3995 383 4389 23738;23739;23740;23741 17947 17947 1 37783000 41753000 0 0 42934000 40909000 0 0 SGGVTFAARPQDHSQK TGRARSGSIKSPIWRSGGVTFAARPQDHSQ GGVTFAARPQDHSQKVNKKMYRGALKSILS R S G Q K V 2 1 0 1 0 2 0 2 1 0 0 1 0 1 1 2 1 0 0 1 0 0 16 1 0 3 1684.8281 P60723 P60723 80 95 rplD 50S ribosomal protein L4 yes yes 2;3 3.3231E-56 144.29 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 180640000 54560000 47979000 0 0 40803000 37299000 0 0 3996 383 4390 23742;23743;23744;23745;23746;23747;23748 17948;17949;17950;17951;17952 17948 5 54560000 49111000 0 0 49220000 41319000 0 0 SGIVAFK KLARKFAHDRYGSHKSGIVAFKNAFHGRTL HDRYGSHKSGIVAFKNAFHGRTLFTVSAGG K S G F K N 1 0 0 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 7 0 0 1 720.41703 P77581 P77581 129 135 astC Succinylornithine transaminase yes yes 2 0.0025303 83.614 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 228610000 65823000 55898000 0 0 47899000 58992000 0 0 3997 437 4391 23749;23750;23751;23752 17953;17954;17955;17956 17954 4 65823000 57217000 0 0 57780000 65350000 0 0 SGKVAVRTRRGKDLGSMDVNE RRVPYMLVCGDKEVESGKVAVRTRRGKDLG RTRRGKDLGSMDVNEVIEKLQQEIRSRSLK E S G N E V 1 3 1 2 0 0 1 3 0 0 1 2 1 0 0 2 1 0 0 3 0 0 21 5 0 1 2274.1863 P0A8M3 P0A8M3 603 623 thrS Threonine--tRNA ligase yes yes 3;4 1.6558E-06 56.936 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 2 2 1 1 132620000 18125000 12898000 26744000 34464000 10444000 10787000 9443100 9711900 3998 147 4392 23753;23754;23755;23756;23757;23758;23759;23760;23761;23762;23763;23764;23765;23766 17957;17958;17959;17960;17961;17962;17963;17964;17965;17966 17964 10 278490000 196700000 227240000 261290000 160790000 163500000 72677000 55735000 SGKVAVRTRRGKDLGSMDVNEVIE RRVPYMLVCGDKEVESGKVAVRTRRGKDLG RGKDLGSMDVNEVIEKLQQEIRSRSLKQLE E S G I E K 1 3 1 2 0 0 2 3 0 1 1 2 1 0 0 2 1 0 0 4 0 0 24 5 1 1 2615.3813 P0A8M3 P0A8M3 603 626 thrS Threonine--tRNA ligase yes yes 4 0.0079238 19.755 By MS/MS 1 2078700 0 0 0 0 0 2078700 0 0 3999 147 4393 23767 17967 17967 1 0 0 0 0 0 31506000 0 0 SGLAALFSSR ERILSAAIATRTERRSGLAALFSSRE____ RTERRSGLAALFSSRE______________ R S G S R E 2 1 0 0 0 0 0 1 0 0 2 0 0 1 0 3 0 0 0 0 0 0 10 0 0 2 1007.54 P04993 P04993 598 607 recD RecBCD enzyme subunit RecD yes yes 2 0.00022486 93.111 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 34050000 9025700 7863800 0 0 8180000 8980200 0 0 4000 46 4394 23768;23769;23770;23771 17968;17969;17970 17969 3 9025700 8049400 0 0 9867600 9948100 0 0 SGLASLHAR GMVLTGPKEAERLYRSGLASLHARVKVRIT AERLYRSGLASLHARVKVRITEYEKDANGE R S G A R V 2 1 0 0 0 0 0 1 1 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 0 2 910.49846 P0A8T7 P0A8T7 539 547 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 8.9961E-07 114.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30291000 8419200 8611400 0 0 7103800 6156900 0 0 4001 153 4395 23772;23773;23774;23775 17971;17972;17973;17974 17973 4 8419200 8814700 0 0 8569300 6820500 0 0 SGQAETLADHEGR GIDLGTTNSLVATVRSGQAETLADHEGRHL VRSGQAETLADHEGRHLLPSVVHYQQQGHS R S G G R H 2 1 0 1 0 1 2 2 1 0 1 0 0 0 0 1 1 0 0 0 0 0 13 0 2 2 1369.6222 P0A6Z1 P0A6Z1 38 50 hscA Chaperone protein HscA yes yes 2;3 4.3495E-06 79.693 By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 17463000 5514200 5976000 0 0 2736400 3236000 0 0 4002 87 4396 23776;23777;23778;23779;23780;23781;23782;23783 17975;17976 17975 2 5514200 6117000 0 0 3300900 3584800 0 0 SGRATFNSEE ITSTEEKRWIQQRIESGRATFNSEEKKRFL QQRIESGRATFNSEEKKRFLSELTAAEGLE E S G E E K 1 1 1 0 0 0 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 10 1 1 1 1096.4785 P0AFG3 P0AFG3 190 199 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0062193 67.993 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 57505000 4242900 4879700 8563400 8948400 2295100 2227300 10539000 15810000 4003 246 4397 23784;23785;23786;23787;23788;23789;23790;23791 17977;17978 17977 1 65191000 74416000 72762000 67843000 35336000 33759000 81110000 90728000 SGTAAGVRRIE ASRTGDIGLFRIISESGTAAGVRRIEAVTG IISESGTAAGVRRIEAVTGEGAIATVHADS E S G I E A 2 2 0 0 0 0 1 2 0 1 0 0 0 0 0 1 1 0 0 1 0 0 11 2 0 2 1115.6047 P00957 P00957 686 696 alaS Alanine--tRNA ligase yes yes 2 1.5538E-05 78.149 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 40852000 1349500 0 8919000 3582900 4856000 0 10438000 11707000 4004 33 4398 23792;23793;23794;23795;23796;23797;23798 17979 17979 1 1349500 0 75783000 27164000 58591000 0 80332000 67182000 SGTLPVHQIVGMGEAYR IEAQMHGGGHERGMRSGTLPVHQIVGMGEA TLPVHQIVGMGEAYRIAKEEMATEMERLRG R S G Y R I 1 1 0 0 0 1 1 3 1 1 1 0 1 0 1 1 1 0 1 2 0 0 17 0 1 2 1813.9145 P0A6B7 P0A6B7 241 257 iscS Cysteine desulfurase IscS yes yes 3 0.010525 32.191 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 20451000 3887500 6197300 0 0 4652200 5713800 0 0 4005 67 4399 23799;23800;23801;23802 17980;17981;17982 17982 1 3887500 6343600 0 0 5612000 6329600 0 0 SGVEGAAFQSRLP QAPPEEENESEPEEPSGVEGAAFQSRLPHD EPSGVEGAAFQSRLPHDRMTSQEAACFPDI P S G L P H 2 1 0 0 0 1 1 2 0 0 1 0 0 1 1 2 0 0 0 1 0 0 13 1 1 2 1317.6677 LSD1-FL-His LSD1-FL-His 174 186 yes yes 2 2.6847E-78 183.33 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 154230000 15815000 19263000 0 0 46451000 72703000 0 0 4006 24 4400 23803;23804;23805;23806 17983;17984;17985;17986 17986 2 95465000 115290000 0 0 66132000 103640000 0 0 SGVSISAIAR VLNEEQKQAVFERIKSGVSISAIAREFKTS FERIKSGVSISAIAREFKTSRQTILRAKAK K S G A R E 2 1 0 0 0 0 0 1 0 2 0 0 0 0 0 3 0 0 0 1 0 0 10 0 0 2 959.53999 P77170;P0ADI0 P77170 166 175 pinQ;pinR Putative DNA-invertase from lambdoid prophage Qin;Putative DNA-invertase from lambdoid prophage Rac yes no 2 0.00075536 73.985 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 25293000 8973200 5829100 0 0 3432700 7057600 0 0 4007 222 4401 23807;23808;23809;23810 17987;17988 17988 2 8973200 5966700 0 0 4140900 7818300 0 0 SGVVGLSR LASIRDVAKIVEVARSGVVGLSRGDKIMR_ KIVEVARSGVVGLSRGDKIMR_________ R S G S R G 0 1 0 0 0 0 0 2 0 0 1 0 0 0 0 2 0 0 0 2 0 0 8 0 0 0 773.43955 P00894 P00894 150 157 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 0.00018798 94.114 By MS/MS By MS/MS By MS/MS 1 2 1 18146000 17833000 0 0 0 313000 0 0 0 4008 30 4402 23811;23812;23813;23814 17989;17990;17991 17991 3 17833000 0 0 0 4818900 0 0 0 SGYLYLGSPVKQIRPLSDEE MIGAGSLVPQNKRLESGYLYLGSPVKQIRP LGSPVKQIRPLSDEEKAGLRYSANNYVKWK E S G E E K 0 1 0 1 0 1 2 2 0 1 3 1 0 0 2 3 0 0 2 1 0 0 20 2 1 2 2250.1532 P0A9W9 P0A9W9 138 157 yrdA Protein YrdA yes yes 2;3 7.5171E-76 150.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 1 2 252510000 0 21209000 18023000 19013000 60719000 53812000 25173000 54562000 4009 179 4403 23815;23816;23817;23818;23819;23820;23821;23822;23823;23824;23825;23826 17992;17993;17994;17995;17996;17997;17998;17999;18000;18001;18002;18003 17997 12 0 323440000 153140000 144150000 934820000 815600000 193740000 313120000 SHATAQEEILK AQYVVTRDTIKAKGRSHATAQEEILKLSEV AKGRSHATAQEEILKLSEVFKQFRLVPKQF R S H L K L 2 0 0 0 0 1 2 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 11 0 2 2 1225.6303 P00579 P00579 241 251 rpoD RNA polymerase sigma factor RpoD yes yes 2;3 1.1607E-287 298.12 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 687260000 230320000 217970000 0 0 131880000 107090000 0 0 4010 27 4404 23827;23828;23829;23830;23831;23832;23833;23834 18004;18005;18006;18007;18008;18009;18010;18011 18010 8 230320000 223110000 0 0 159090000 118630000 0 0 SHAVKIVVE TQQEIPNAETMKQTESHAVKIVVEAARRLL TMKQTESHAVKIVVEAARRLL_________ E S H V E A 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 0 0 3 0 0 9 1 0 1 980.56548 P12758 P12758 239 247 udp Uridine phosphorylase yes yes 2 0.0022253 61.962 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 16818000 2961700 2964500 0 5251800 0 0 5640000 0 4011 278 4405 23835;23836;23837;23838;23839 18012;18013;18014 18014 3 45506000 45209000 0 39817000 0 0 43407000 0 SHDALTAVTSLSVDK VQQNKPTRSKRGMRRSHDALTAVTSLSVDK SHDALTAVTSLSVDKTSGEKHLRHHITADG R S H D K T 2 0 0 2 0 0 0 0 1 0 2 1 0 0 0 3 2 0 0 2 0 0 15 0 0 2 1542.789 P0A7N4 P0A7N4 18 32 rpmF 50S ribosomal protein L32 yes yes 2;3 8.1071E-191 270.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 312170000 77360000 49056000 0 0 125250000 60506000 0 0 4012 116 4406 23840;23841;23842;23843;23844;23845;23846;23847 18015;18016;18017;18018;18019;18020;18021;18022 18020 8 77360000 50214000 0 0 151090000 67028000 0 0 SHDALTAVTSLSVDKTSGEK VQQNKPTRSKRGMRRSHDALTAVTSLSVDK TAVTSLSVDKTSGEKHLRHHITADGYYRGR R S H E K H 2 0 0 2 0 0 1 1 1 0 2 2 0 0 0 4 3 0 0 2 0 0 20 1 1 2 2045.0277 P0A7N4 P0A7N4 18 37 rpmF 50S ribosomal protein L32 yes yes 3 7.8135E-54 150.69 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 44930000 21322000 16469000 0 0 5472700 0 0 1666400 4013 116 4407 23848;23849;23850;23851 18023;18024;18025 18023 3 21322000 16858000 0 0 6601700 0 0 9563100 SHIRDDEPVKK ______________________________ LIYRSHIRDDEPVKKIEEMVSIANRRNMQS R S H K K I 0 1 0 2 0 0 1 0 1 1 0 2 0 0 1 1 0 0 0 1 0 0 11 2 1 1 1322.6943 P75990 P75990 9 19 bluF Blue light- and temperature-regulated antirepressor BluF yes yes 3 0.00035501 69.721 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24021000 6570600 10558000 0 0 3975000 2917900 0 0 4014 414 4408 23852;23853;23854;23855 18026;18027;18028;18029 18027 3 6570600 10807000 0 0 4795000 3232400 0 0 SHLDNGFR ______________________________ ______________________________ M S H F R S 0 1 1 1 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 0 0 944.44643 P42596 P42596 2 9 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 1.4001E-34 157.58 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 128610000 35446000 51297000 0 0 17946000 23922000 0 0 4015 366 4409 23856;23857;23858;23859;23860;23861 18030;18031;18032;18033 18030 4 37445000 52507000 0 0 21648000 27102000 0 0 SHNSGIIGPSAASFVADFR HNPRFEVMVPGGTLRSHNSGIIGPSAASFV GIIGPSAASFVADFRADYLVTSVGAIESDG R S H F R A 3 1 1 1 0 0 0 2 1 2 0 0 0 2 1 4 0 0 0 1 0 0 19 0 0 4 1931.949 P32144 P32144 151 169 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 3 4.0953E-12 81.723 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 40357000 9732700 11260000 0 0 8034100 11331000 0 0 4016 339 4410 23862;23863;23864;23865 18034;18035;18036 18035 3 9732700 11526000 0 0 9691600 12552000 0 0 SHPAGALGAR AVMQARGFNEEDFARSHPAGALGARLLNKV EDFARSHPAGALGARLLNKVHHLMRRDDAI R S H A R L 3 1 0 0 0 0 0 2 1 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 0 4 935.49371 P17115 P17115 185 194 gutQ Arabinose 5-phosphate isomerase GutQ yes yes 2 0.0076651 53.166 By MS/MS By MS/MS 1 1 10048000 4606700 5441600 0 0 0 0 0 0 4017 287 4411 23866;23867 18037 18037 0 4606700 5570000 0 0 0 0 0 0 SHRVIGGAIVGTNGGELLGE SDCADGMTKLIFDKESHRVIGGAIVGTNGG GGAIVGTNGGELLGEIGLAIEMGCDAEDIA E S H G E I 1 1 1 0 0 0 2 6 1 2 2 0 0 0 0 1 1 0 0 2 0 0 20 1 1 1 1935.0174 P0A9P0 P0A9P0 405 424 lpdA Dihydrolipoyl dehydrogenase yes yes 3 2.7313E-14 80.638 By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 29425000 0 0 7283700 4483900 5984900 2867800 8804200 0 4018 172 4412 23868;23869;23870;23871;23872 18038;18039 18039 2 0 0 61889000 33995000 92144000 43466000 67759000 0 SIADQAR FSTYATWWIRQAITRSIADQARTIRIPVHM WIRQAITRSIADQARTIRIPVHMIETINKL R S I A R T 2 1 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 7 0 0 2 759.38752 P00579 P00579 442 448 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0010753 103.28 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 91163000 33992000 38180000 0 0 11283000 7708700 0 0 4019 27 4413 23873;23874;23875;23876 18040;18041;18042;18043;18044;18045;18046 18045 7 33992000 39081000 0 0 13611000 8539600 0 0 SIEHDIVHGLQA LMLVAKLSRLKGLDASIEHDIVHGLQALPS LDASIEHDIVHGLQALPSRIEQMLSQDKRI A S I Q A L 1 0 0 1 0 1 1 1 2 2 1 0 0 0 0 1 0 0 0 1 0 0 12 0 1 0 1317.6677 P17169 P17169 429 440 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 3.9357E-39 148.32 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1736200000 118790000 115360000 0 0 946980000 555010000 0 0 4020 288 4414 23877;23878;23879;23880;23881;23882;23883;23884 18047;18048;18049;18050;18051;18052;18053;18054;18055 18055 9 717100000 690450000 0 0 1348200000 791170000 0 0 SIGLIHQDNSTDAMEEIKK LVMTTNAGVRETERKSIGLIHQDNSTDAME IHQDNSTDAMEEIKKIFTPEFRNRLDNIIW K S I K K I 1 0 1 2 0 1 2 1 1 3 1 2 1 0 0 2 1 0 0 0 0 0 19 1 2 1 2128.047 P0ABH9 P0ABH9 616 634 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 3 0.015151 22.221 By matching By matching By MS/MS By matching 1 1 1 1 25267000 8602400 5074500 0 0 5817400 5772500 0 0 4021 201 4415 23885;23886;23887;23888 18056 18056 1 8602400 5194200 0 0 7017500 6394700 0 0 SIGLVIPDLENTSYTR HPNAVAAGLRAGRTRSIGLVIPDLENTSYT IGLVIPDLENTSYTRIANYLERQARQRGYQ R S I T R I 0 1 1 1 0 0 1 1 0 2 2 0 0 0 1 2 2 0 1 1 0 0 16 0 1 1 1776.9258 P0ACP1 P0ACP1 63 78 cra Catabolite repressor/activator yes yes 2 8.08E-45 144.57 By MS/MS By MS/MS By MS/MS 1 1 1 75935000 38071000 0 0 0 20558000 17306000 0 0 4022 217 4416 23889;23890;23891 18057;18058 18057 2 38071000 0 0 0 24799000 19171000 0 0 SIIVATGAK LHQIETASGAVLKARSIIVATGAKWRNMNV AVLKARSIIVATGAKWRNMNVPGEDQYRTK R S I A K W 2 0 0 0 0 0 0 1 0 2 0 1 0 0 0 1 1 0 0 1 0 0 9 0 0 2 858.51747 P35340 P35340 317 325 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.00018317 101.54 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1473200000 344340000 475410000 0 0 291880000 361610000 0 0 4023 348 4417 23892;23893;23894;23895 18059;18060;18061 18060 3 344340000 486630000 0 0 352090000 400580000 0 0 SIKEQTLMTP ______________________________ ______________________________ M S I T P Y 0 0 0 0 0 1 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 10 1 1 0 1146.5955 P0A6I3 P0A6I3 2 11 coaA Pantothenate kinase yes yes 2 0.0074952 31.372 By MS/MS 1 0 0 0 0 0 0 0 0 0 4024 72 4418 23896 18062 18062 0 0 0 0 0 0 0 0 0 SILSELVR HSQKVNKKMYRGALKSILSELVRQDRLIVV MYRGALKSILSELVRQDRLIVVEKFSVEAP K S I V R Q 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 8 0 1 0 915.53893 P60723 P60723 107 114 rplD 50S ribosomal protein L4 yes yes 2 6.5386E-12 132.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 218890000 53526000 56737000 0 0 44633000 63998000 0 0 4025 383 4419 23897;23898;23899;23900 18063;18064;18065;18066 18065 4 53526000 58076000 0 0 53841000 70896000 0 0 SIMIEIR APNAKDLAGRDVVARSIMIEIREGRGCDGP AGRDVVARSIMIEIREGRGCDGPWGPHAKL R S I I R E 0 1 0 0 0 0 1 0 0 3 0 0 1 0 0 1 0 0 0 0 0 0 7 0 1 0 860.47897 P0AC41 P0AC41 292 298 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.0032726 73.039 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 66475000 18441000 14811000 0 0 16836000 16386000 0 0 4026 203 4420 23901;23902;23903;23904;23905 18067;18068;18069;18070 18070 4 18441000 15161000 0 0 21067000 18152000 0 0 SIRNAHRCLDWEP SYYGKGYQDVEHRKPSIRNAHRCLDWEPKI KPSIRNAHRCLDWEPKIDMQETIDETLDFF P S I E P K 1 2 1 1 1 0 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 0 13 2 1 1 1652.7842 P77398 P77398 622 634 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4 0.00010703 47.532 By matching By MS/MS By MS/MS 1 2 1 23901000 0 736010 0 0 5402600 17762000 0 0 4027 432 4421 23906;23907;23908;23909 18071;18072 18071 2 0 4405000 0 0 7691700 25320000 0 0 SISAMFEH SGMLAEAIRRISNEESISAMFEH_______ RRISNEESISAMFEH_______________ E S I E H - 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 1 1 920.4062 P0A717 P0A717 308 315 prs Ribose-phosphate pyrophosphokinase yes yes 2 0.0045736 75.311 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 66197000 7613400 6348600 13129000 16916000 3653900 4042300 6041800 8451600 4028 91 4422 23910;23911;23912;23913;23914;23915;23916;23917 18073;18074;18075;18076;18077;18078 18077 3 116980000 96817000 111560000 128250000 56254000 61267000 46499000 48502000 SISISVAR GGFGSRSLVNLGGSKSISISVARGGGRGSG VNLGGSKSISISVARGGGRGSGFGGGYGGG K S I A R G 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 1 0 0 8 0 0 1 831.48142 CON__P04264 CON__P04264 75 82 yes yes 2 4.1545E-46 170.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 646820000 86975000 70335000 0 0 286230000 203280000 0 0 + 4029 9 4423 23918;23919;23920;23921 18079;18080;18081;18082;18083;18084 18081 6 86975000 71995000 0 0 345280000 225190000 0 0 SITKDQIIE ______________________________ ______________________________ M S I I E A 0 0 0 1 0 1 1 0 0 3 0 1 0 0 0 1 1 0 0 0 0 0 9 1 0 0 1045.5655 P0A7K2 P0A7K2 2 10 rplL 50S ribosomal protein L7/L12 yes yes 2 0.00036481 91.9 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 1 58663000 7618800 14013000 16733000 2519100 8575900 4957100 4246200 0 4030 108 4424;4425 23922;23923;23924;23925;23926;23927;23928;23929;23930 18085;18086;18087;18088;18089;18090 18086 6 117060000 213700000 142180000 19099000 132030000 75132000 32680000 0 SKAEAESLYQSK IIAEVKAQNEDIAQKSKAEAESLYQSKYEE AQKSKAEAESLYQSKYEELQITAGRHGDSV K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 12 1 2 2 1339.662 CON__P04264 CON__P04264 365 376 yes yes 2;3 1.0631E-293 317.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1170700000 187520000 242550000 0 0 368850000 371820000 0 0 + 4031 9 4426 23931;23932;23933;23934;23935;23936;23937;23938 18091;18092;18093;18094;18095;18096;18097;18098 18097 8 187520000 248270000 0 0 444950000 411900000 0 0 SKEEAEALYHSK IIAEVKAQYEEIAQRSKEEAEALYHSKYEE AQRSKEEAEALYHSKYEELQVTVGRHGDSL R S K S K Y 2 0 0 0 0 0 3 0 1 0 1 2 0 0 0 2 0 0 1 0 0 0 12 1 3 2 1390.6729 CON__P35908v2;CON__P35908 CON__P35908v2 363 374 yes no 2;3 1.134E-159 223.08 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 871810000 129910000 125570000 0 0 341330000 275000000 0 0 + 4032 16 4427 23939;23940;23941;23942;23943;23944;23945;23946 18099;18100;18101;18102;18103;18104;18105;18106;18107;18108 18108 10 129910000 128530000 0 0 411750000 304640000 0 0 SKELTTEIDNNIEQISSYK AEQNRKDAEAWFNEKSKELTTEIDNNIEQI TTEIDNNIEQISSYKSEITELRRNVQALEI K S K Y K S 0 0 2 1 0 1 3 0 0 3 1 2 0 0 0 3 2 0 1 0 0 0 19 1 3 0 2211.0907 CON__P13645 CON__P13645 344 362 yes yes 3 1.532E-235 195.96 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 301560000 50045000 30332000 0 0 107350000 112860000 977080 0 + 4033 12 4428 23947;23948;23949;23950;23951 18109;18110;18111;18112 18112 4 50045000 31048000 0 0 129490000 125030000 7519800 0 SKGKITYLKGE VTGYPGDKPVATMWESKGKITYLKGEAMQY TMWESKGKITYLKGEAMQYDLSTTGGNSGS E S K G E A 0 0 0 0 0 0 1 2 0 1 1 3 0 0 0 1 1 0 1 0 0 0 11 3 0 0 1222.6921 CON__P0C1U8 CON__P0C1U8 214 224 yes yes 2;3;4 1.3283E-49 187.76 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 5 3 3 3 3 3 78248000000 3553600000 3799900000 13442000000 15246000000 1980800000 1890900000 14887000000 23447000000 + 4034 11 4429 23952;23953;23954;23955;23956;23957;23958;23959;23960;23961;23962;23963;23964;23965;23966;23967;23968;23969;23970;23971;23972;23973;23974;23975;23976 18113;18114;18115;18116;18117;18118;18119;18120;18121;18122;18123;18124;18125;18126;18127;18128;18129;18130;18131;18132;18133;18134;18135;18136 18126 23 54592000000 57949000000 114220000000 115590000000 30496000000 28660000000 114570000000 134560000000 SKGKITYLKGEAMQYDLSTTGGNSGSPVFNE VTGYPGDKPVATMWESKGKITYLKGEAMQY LSTTGGNSGSPVFNEKNEVIGIHWGGVPNE E S K N E K 1 0 2 1 0 1 2 5 0 1 2 3 1 1 1 4 3 0 2 1 0 0 31 3 1 2 3278.5765 CON__P0C1U8 CON__P0C1U8 214 244 yes yes 3;4 4.8088E-06 64.16 By MS/MS By MS/MS 2 2 33176000 0 0 0 0 20030000 13146000 0 0 + 4035 11 4430 23977;23978;23979;23980 18137;18138;18139 18137 3 0 0 0 0 308380000 199240000 0 0 SKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNE VTGYPGDKPVATMWESKGKITYLKGEAMQY TGGNSGSPVFNEKNEVIGIHWGGVPNEFNG E S K N E V 1 0 3 1 0 1 3 5 0 1 2 4 1 1 1 4 3 0 2 1 0 0 34 4 2 2 3649.757 CON__P0C1U8 CON__P0C1U8 214 247 yes yes 4;5 1.5458E-129 163.51 By MS/MS By matching By MS/MS By MS/MS 2 1 3 3 170610000 6899000 2463400 0 0 75914000 85333000 0 0 + 4036 11 4431;4432 23981;23982;23983;23984;23985;23986;23987;23988;23989 18140;18141;18142;18143;18144;18145 18144 9 6 106000000 37567000 0 0 1168800000 1293300000 0 0 SKIFDFVKPGVITGDDVQKVFQVAKE ______________________________ ITGDDVQKVFQVAKENNFALPAVNCVGTDS M S K K E N 1 0 0 3 0 2 1 2 0 2 0 4 0 3 1 1 1 0 0 5 0 0 26 4 0 2 2893.5589 P0AB71 P0AB71 2 27 fbaA Fructose-bisphosphate aldolase class 2 yes yes 4 1.0564E-53 116.94 By MS/MS By MS/MS 1 1 170220000 0 0 0 0 23472000 146750000 0 0 4037 190 4433 23990;23991 18146;18147;18148 18148 3 0 0 0 0 361380000 2224200000 0 0 SKIVKIIGRE ______________________________ ______________________________ M S K R E I 0 1 0 0 0 0 1 1 0 3 0 2 0 0 0 1 0 0 0 1 0 0 10 3 0 0 1141.7183 P0A6P9 P0A6P9 2 11 eno Enolase yes yes 3 0.012065 43.502 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 35825000 0 0 6583000 6719300 0 1428600 8190700 12904000 4038 79 4434 23992;23993;23994;23995;23996 18149 18149 1 0 0 55935000 50943000 0 21652000 63037000 74052000 SKLDLVVAGTE NDQYVLNPTQDELKESKLDLVVAGTEAAVL ELKESKLDLVVAGTEAAVLMVESEAQLLSE E S K T E A 1 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 11 1 0 1 1130.6183 P05055 P05055 173 183 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.00057567 69.276 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 1 26612000 5763300 4508600 3705800 754770 5028500 5556100 0 1294700 4039 48 4435 23997;23998;23999;24000;24001;24002;24003 18150;18151;18152 18150 3 88551000 68757000 31487000 5722300 77419000 84211000 0 7429800 SKSTLIHQGEKA TLEWFLSHCHIHKYPSKSTLIHQGEKAETL KYPSKSTLIHQGEKAETLYYIVKGSVAVLI P S K K A E 1 0 0 0 0 1 1 1 1 1 1 2 0 0 0 2 1 0 0 0 0 0 12 2 1 0 1297.699 P0ACJ8 P0ACJ8 26 37 crp cAMP-activated global transcriptional regulator CRP yes yes 3 0.020398 20.857 By MS/MS By MS/MS By MS/MS 1 2 2 7977100 2106600 2742400 0 0 0 3128100 0 0 4040 213 4436 24004;24005;24006;24007;24008 18153 18153 0 12716000 13455000 0 0 0 4303000 0 0 SLAGIPCDVE GTSYNSGMVSRYWFESLAGIPCDVEIASEF RYWFESLAGIPCDVEIASEFRYRKSAVRRN E S L V E I 1 0 0 1 1 0 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 10 0 0 2 1059.4907 P17169 P17169 317 326 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 1;2 0.0059488 69.628 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 1 1 34400000 2799200 5949300 5899400 8594100 1789500 3474300 2917500 2976400 4041 288 4437 24009;24010;24011;24012;24013;24014;24015;24016;24017;24018 18154;18155;18156;18157 18156 2 43009000 90728000 50127000 65156000 27551000 52658000 22454000 17081000 SLALVVAQHHPLAVHE PVHSPELEAIPLLTESLALVVAQHHPLAVH LALVVAQHHPLAVHEQVALSRLHDEKLVLL E S L H E Q 3 0 0 0 0 1 1 0 3 0 3 0 0 0 1 1 0 0 0 3 0 0 16 0 0 4 1719.942 P27111 P27111 164 179 cynR HTH-type transcriptional regulator CynR yes yes 3 1.1916E-10 82.102 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 70021000 5887500 5974300 14848000 13481000 7873300 0 12264000 9693400 4042 319 4438 24019;24020;24021;24022;24023;24024;24025;24026 18158;18159;18160;18161;18162 18159 5 90459000 91109000 126160000 102210000 121220000 0 94383000 55629000 SLANLSEDE SRRKRAKVEYREMDESLANLSEDEYYSEEE YREMDESLANLSEDEYYSEEERNAKAEKEK E S L D E Y 1 0 1 1 0 0 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 1 1 976.43492 LSD1-FL-His LSD1-FL-His 128 136 yes yes 1;2 0.00020379 101.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 2 2 31976000000 5881600000 6897400000 2972900000 3277500000 3252600000 2673900000 3233600000 3786500000 4043 24 4439 24027;24028;24029;24030;24031;24032;24033;24034;24035;24036;24037;24038;24039;24040;24041;24042;24043;24044 18163;18164;18165;18166;18167;18168;18169;18170;18171;18172;18173;18174;18175;18176 18176 11 90363000000 105190000000 25260000000 24848000000 50076000000 40526000000 24887000000 21730000000 SLANLSEDEYYSE SRRKRAKVEYREMDESLANLSEDEYYSEEE DESLANLSEDEYYSEEERNAKAEKEKKLPP E S L S E E 1 0 1 1 0 0 3 0 0 0 2 0 0 0 0 3 0 0 2 0 0 0 13 0 2 1 1518.6362 LSD1-FL-His LSD1-FL-His 128 140 yes yes 2 0.010817 53.751 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 32528000 0 0 5800400 4412100 1451400 1546000 9095100 10223000 4044 24 4440 24045;24046;24047;24048;24049;24050 18177 18177 1 0 0 49285000 33450000 22346000 23432000 69998000 58668000 SLDDFLIK RTPAVIKKAMDEQGKSLDDFLIKQ______ AMDEQGKSLDDFLIKQ______________ K S L I K Q 0 0 0 2 0 0 0 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 8 0 0 0 949.51205 P0ACF8 P0ACF8 129 136 hns DNA-binding protein H-NS yes yes 2 0.0018648 89.752 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 702940000 171110000 159600000 0 0 168530000 203700000 0 0 4045 210 4441 24051;24052;24053;24054 18178;18179;18180;18181 18181 4 171110000 163360000 0 0 203300000 225650000 0 0 SLDDFLIKQ RTPAVIKKAMDEQGKSLDDFLIKQ______ MDEQGKSLDDFLIKQ_______________ K S L K Q - 0 0 0 2 0 1 0 0 0 1 2 1 0 1 0 1 0 0 0 0 0 0 9 1 0 0 1077.5706 P0ACF8 P0ACF8 129 137 hns DNA-binding protein H-NS yes yes 1;2 2.1313E-36 178.3 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 1 1469200000 435240000 535030000 0 0 228580000 268900000 435570 1041900 4046 210 4442 24055;24056;24057;24058;24059;24060;24061;24062;24063;24064 18182;18183;18184;18185;18186 18183 5 435240000 547660000 0 0 275730000 297880000 3352200 5979400 SLDLDSIIAEVK QISETNVILSMDNNRSLDLDSIIAEVKAQN NNRSLDLDSIIAEVKAQNEDIAQKSKAEAE R S L V K A 1 0 0 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 1 0 0 12 0 1 1 1301.7078 CON__P04264 CON__P04264 344 355 no no 2 2.1731E-35 148.32 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 1 3217200000 696750000 314250000 0 0 1016400000 1189800000 0 0 + 4047 9 4443 24065;24066;24067;24068;24069;24070;24071 18187;18188;18189;18190;18191;18192;18193 18188 6 696750000 321660000 0 0 1226100000 1318000000 0 0 SLEKLADEVDE EFDGKPFQSVSKVDESLEKLADEVDESAKE KVDESLEKLADEVDESAKEAEKALTPFIDR E S L D E S 1 0 0 2 0 0 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 1 2 1 1246.5929 P0A6Z3 P0A6Z3 489 499 htpG Chaperone protein HtpG yes yes 2 8.0094E-06 101.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 127570000 7179400 5799600 22574000 23916000 4340400 0 26267000 37489000 4048 88 4444 24072;24073;24074;24075;24076;24077;24078;24079 18194;18195;18196;18197 18194 3 110310000 88444000 191810000 181320000 66825000 0 202160000 215140000 SLFVGSSVAIA SRHVTMLSIAGVIGASLFVGSSVAIAEAGP VIGASLFVGSSVAIAEAGPAVLLAYLFAGL A S L I A E 2 0 0 0 0 0 0 1 0 1 1 0 0 1 0 3 0 0 0 2 0 0 11 0 0 1 1049.5757 P25527 P25527 31 41 gabP GABA permease yes yes 2 0.00085398 69.198 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 687990000 35958000 43302000 0 0 376160000 232570000 0 0 4049 314 4445 24080;24081;24082;24083 18198;18199 18198 2 217060000 259160000 0 0 535540000 331520000 0 0 SLGQFNLDGINPAPR IHVLQGERKRAADNKSLGQFNLDGINPAPR SLGQFNLDGINPAPRGMPQIEVTFDIDADG K S L P R G 1 1 2 1 0 1 0 2 0 1 2 0 0 1 2 1 0 0 0 0 0 0 15 0 0 3 1597.8213 P0A6Y8 P0A6Y8 453 467 dnaK Chaperone protein DnaK yes yes 2 1.6326E-242 248.05 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 1761800000 360540000 404870000 0 0 433710000 562710000 0 0 4050 86 4446 24084;24085;24086;24087;24088;24089;24090;24091;24092 18200;18201;18202;18203;18204;18205;18206;18207;18208;18209;18210;18211 18210 12 360540000 414420000 0 0 523180000 623360000 0 0 SLIDQGVK ______________________________ GAEMVVRSLIDQGVKQVFGYPGGAVLDIYD R S L V K Q 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 8 0 0 0 858.48108 P00893 P00893 13 20 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 1.5073E-11 127.84 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 146900000 44392000 42346000 0 0 27912000 32247000 0 0 4051 29 4447 24093;24094;24095;24096 18212;18213;18214;18215 18212 4 44392000 43345000 0 0 33670000 35722000 0 0 SLIITGNGDVVQP LRKLEALLAVADETASLIITGNGDVVQPEN TASLIITGNGDVVQPENDLIAIGSGGPYAQ A S L Q P E 0 0 1 1 0 1 0 2 0 2 1 0 0 0 1 1 1 0 0 2 0 0 13 0 0 0 1311.7034 P0A7B8 P0A7B8 104 116 hslV ATP-dependent protease subunit HslV yes yes 2 0.00012644 66.435 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 13684000 0 1539200 0 0 3561000 6976600 0 1607100 4052 100 4448 24097;24098;24099;24100;24101 18216 18216 1 0 12361000 0 0 5069700 9945100 0 9222700 SLLAMGCGAVLMK APHARTEQEMLEQGRSLLAMGCGAVLMKGG GRSLLAMGCGAVLMKGGHLDDEQSPDWLFT R S L M K G 2 0 0 0 1 0 0 2 0 0 3 1 2 0 0 1 0 0 0 1 0 0 13 0 0 2 1349.6869 P76422 P76422 164 176 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 9.643E-22 127.3 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 63024000 16456000 15049000 0 0 13450000 18070000 0 0 4053 425 4449;4450 24102;24103;24104;24105;24106;24107;24108;24109 18217;18218;18219;18220;18221;18222;18223;18224;18225 18224 325 8 16456000 15404000 0 0 16224000 20017000 0 0 SLLEGEGSSGGGGR LDIKIRLENEIQTYRSLLEGEGSSGGGGRG RSLLEGEGSSGGGGRGGGSFGGGYGGGSSG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 0 14 0 2 0 1261.5899 CON__P13645 CON__P13645 451 464 yes yes 2 5.4121E-23 139.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 335120000 40104000 43137000 0 0 117250000 134630000 0 0 + 4054 12 4451 24110;24111;24112;24113;24114 18226;18227;18228;18229 18226 4 40104000 45824000 0 0 141440000 149140000 0 0 SLLLLQK GSQVAVPNDPTNLGRSLLLLQKVGLIKLKD NDPTNLGRSLLLLQKVGLIKLKDGVGLLPT R S L Q K V 0 0 0 0 0 1 0 0 0 0 4 1 0 0 0 1 0 0 0 0 0 0 7 0 0 0 813.53239 P28635 P28635 145 151 metQ D-methionine-binding lipoprotein MetQ yes yes 2 0.011085 54.525 By matching By MS/MS By MS/MS 1 1 1 14253000 0 4770300 0 0 5600500 3882100 0 0 4055 326 4452 24115;24116;24117 18230;18231 18230 2 0 4882900 0 0 6755800 4300500 0 0 SLLRATHPTVE PVIWIGAQECTGCTESLLRATHPTVENLVL GCTESLLRATHPTVENLVLETISLEYHEVL E S L V E N 1 1 0 0 0 0 1 0 1 0 2 0 0 0 1 1 2 0 0 1 0 0 11 1 0 2 1222.667 P69741 P69741 65 75 hybO Hydrogenase-2 small chain yes yes 2;3 0.00054835 68.371 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 79068000 0 1992800 16953000 17282000 0 1763200 20102000 20974000 4056 403 4453 24118;24119;24120;24121;24122;24123;24124;24125;24126;24127 18232;18233;18234 18234 3 0 30390000 144050000 131020000 0 26725000 154710000 120370000 SLNNQFASFIDK PEIQKVKSREREQIKSLNNQFASFIDKVRF QIKSLNNQFASFIDKVRFLEQQNQVLQTKW K S L D K V 1 0 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 0 0 0 12 0 0 1 1382.683 CON__P04264 CON__P04264 186 197 no no 2 5.7971E-19 152.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1538800000 190370000 221750000 0 0 549800000 576860000 0 0 + 4057 9 4454 24128;24129;24130;24131 18235;18236;18237;18238;18239 18235 5 190370000 226980000 0 0 663230000 639040000 0 0 SLNNQFASFIDKVR PEIQKVKSREREQIKSLNNQFASFIDKVRF KSLNNQFASFIDKVRFLEQQNQVLQTKWEL K S L V R F 1 1 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 1 0 0 14 1 0 1 1637.8526 CON__P04264 CON__P04264 186 199 no no 2;3 1.9878E-10 89.231 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 51279000 5658000 5309700 0 0 19470000 20842000 0 0 + 4058 9 4455 24132;24133;24134;24135;24136 18240;18241;18242;18243;18244 18242 5 5658000 5435000 0 0 23486000 23088000 0 0 SLPDIHSR EKLSVWELDGKHGWKSLPDIHSRANNPTSR DGKHGWKSLPDIHSRANNPTSRMMRFAQLS K S L S R A 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 0 1 923.48248 P0ADM8 P0ADM8 219 226 yieE Uncharacterized protein YieE yes yes 2 0.010451 52.716 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 13009000 3305900 4522600 0 0 2750400 2430600 0 0 4059 223 4456 24137;24138;24139;24140 18245;18246 18246 2 3305900 4629400 0 0 3317800 2692500 0 0 SLRAATHDVLAGLTARE EDTTLELPLDSATTESLRAATHDVLAGLTA RAATHDVLAGLTAREAKVLRMRFGIDMNTD E S L R E A 4 2 0 1 0 0 1 1 1 0 3 0 0 0 0 1 2 0 0 1 0 0 17 2 0 4 1779.9591 P00579 P00579 539 555 rpoD RNA polymerase sigma factor RpoD yes yes 3;4 1.2402E-12 67.418 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 105390000 0 2359500 7771300 8908100 40045000 32700000 0 13607000 4060 27 4457 24141;24142;24143;24144;24145;24146;24147;24148;24149;24150;24151 18247;18248;18249;18250;18251;18252;18253;18254;18255 18248 8 0 35983000 66031000 67538000 616540000 495610000 0 78089000 SLRRFKDDVNE RVLRDNVVIYEGELESLRRFKDDVNEVRNG GELESLRRFKDDVNEVRNGMECGIGVKNYN E S L N E V 0 2 1 2 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 11 3 0 0 1377.7001 P0A705;P0A705-3;P0A705-2 P0A705 844 854 infB Translation initiation factor IF-2 yes no 3 0.020782 33.961 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 41380000 7522100 6035700 2633400 2048200 0 13667000 4761400 4712900 4061 90 4458 24152;24153;24154;24155;24156;24157;24158;24159;24160 18256 18256 1 69322000 66284000 22375000 15528000 0 19482000 36645000 27046000 SLSDITK HARGSAAHGYFQPYKSLSDITKADFLSDPN HGYFQPYKSLSDITKADFLSDPNKITPVFV K S L T K A 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 7 0 0 0 762.41233 P21179 P21179 143 149 katE Catalase HPII yes yes 2 0.0028138 89.55 By MS/MS By MS/MS By MS/MS 1 1 1 90858000 0 38775000 0 0 25608000 26476000 0 0 4062 293 4459 24161;24162;24163 18257;18258;18259;18260;18261 18261 4 0 39690000 0 0 30891000 29329000 0 0 SLSTEATAK ______________________________ ______________________________ M S L A K I 2 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 0 0 0 9 0 1 2 906.46583 P0ADZ4 P0ADZ4 2 10 rpsO 30S ribosomal protein S15 yes yes 2 0.0020559 81.296 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 4333900000 1352100000 1518600000 0 0 696250000 766900000 0 0 4063 231 4460 24164;24165;24166;24167;24168;24169;24170;24171 18262;18263;18264;18265;18266;18267;18268;18269;18270;18271;18272 18264 11 1352100000 1554400000 0 0 839890000 849550000 0 0 SLTAASSLDDMLMR IANEGLFYRLLYLQRSLTAASSLDDMLMRF RSLTAASSLDDMLMRFHRWARDLGLAGASL R S L M R F 2 1 0 2 0 0 0 0 0 0 3 0 2 0 0 3 1 0 0 0 0 0 14 0 0 2 1509.7167 P23305 P23305 95 108 yigA Uncharacterized protein YigA yes yes 2 1.7953E-11 103.34 By MS/MS By matching 1 1 4798900 2333800 2465100 0 0 0 0 0 0 4064 301 4461 24172;24173 18273 18273 1 2333800 2523200 0 0 0 0 0 0 SLTDPAVIQAMHYIR VPPVRVIERRSTDYRSLTDPAVIQAMHYIR SLTDPAVIQAMHYIRNHACKGIKVDQVLDA R S L I R N 2 1 0 1 0 1 0 0 1 2 1 0 1 0 1 1 1 0 1 1 0 0 15 0 0 3 1713.8872 P0ACI3 P0ACI3 281 295 xylR Xylose operon regulatory protein yes yes 3 6.4693E-11 89.013 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 32831000 8637600 9249300 0 0 5015300 9928400 0 0 4065 212 4462 24174;24175;24176;24177 18274;18275;18276 18276 3 8637600 9467600 0 0 6050000 10998000 0 0 SLTEIKDVLASR RTEVELLKTPNLGKKSLTEIKDVLASRGLS GKKSLTEIKDVLASRGLSLGMRLENWPPAS K S L S R G 1 1 0 1 0 0 1 0 0 1 2 1 0 0 0 2 1 0 0 1 0 0 12 1 1 1 1330.7456 P0A7Z4 P0A7Z4 299 310 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 1.5656E-18 129.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20762000 5745900 4974600 0 0 4171900 5869900 0 0 4066 135 4463 24178;24179;24180;24181 18277;18278;18279;18280 18280 4 5745900 5092000 0 0 5032600 6502500 0 0 SLTELTGNPR ______________________________ ______________________________ M S L P R H 0 1 1 0 0 0 1 1 0 0 2 0 0 0 1 1 2 0 0 0 0 0 10 0 1 1 1086.5669 P32144 P32144 2 11 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 2 5.9193E-05 122.19 By MS/MS By MS/MS By MS/MS 1 1 1 66591000 24859000 20381000 0 0 0 21350000 0 0 4067 339 4464 24182;24183;24184 18281;18282;18283 18283 3 24859000 20863000 0 0 0 23651000 0 0 SLVGLGGTK GGGGGGFGGGGFGSRSLVGLGGTKSISISV GGFGSRSLVGLGGTKSISISVAGGGGGFGA R S L T K S 0 0 0 0 0 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 0 0 830.48617 CON__P35908v2;CON__P35908 CON__P35908v2 62 70 yes no 2 2.2167E-35 124.08 By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 422170000 55219000 60332000 0 0 133000000 173620000 0 0 + 4068 16 4465 24185;24186;24187;24188;24189;24190;24191;24192 18284;18285;18286 18285 2 121490000 109000000 0 0 175080000 210380000 0 0 SLVNLGGSK GGGGSFGAGGGFGSRSLVNLGGSKSISISV GGFGSRSLVNLGGSKSISISVARGGGRGSG R S L S K S 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 0 0 873.49198 CON__P04264 CON__P04264 66 74 yes yes 2 5.0712E-14 133.58 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 3 3 3 1 912420000 138600000 174030000 0 0 313050000 285050000 0 1680000 + 4069 9 4466 24193;24194;24195;24196;24197;24198;24199;24200;24201;24202;24203;24204 18287;18288;18289;18290 18290 4 326250000 369380000 0 0 406070000 344410000 0 9641100 SLYNLGGSK VSLAGACGVGGYGSRSLYNLGGSKRISIST GGYGSRSLYNLGGSKRISISTSGGSFRNRF R S L S K R 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 9 0 0 0 937.4869 CON__P13647 CON__P13647 64 72 no no 2 0.00092927 91.318 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46223000 8862800 9119600 0 0 13598000 14643000 0 0 + 4070 13 4467 24205;24206;24207;24208 18291;18292;18293;18294 18294 4 8862800 9334800 0 0 16403000 16221000 0 0 SLYNLGGSR GGGGYGIHGRGFGSRSLYNLGGSRSISINL RGFGSRSLYNLGGSRSISINLMGRSTSGFC R S L S R S 0 1 1 0 0 0 0 2 0 0 2 0 0 0 0 2 0 0 1 0 0 0 9 0 0 0 965.49304 CON__Q7Z794 CON__Q7Z794 60 68 yes yes 2 0.0021452 54.157 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 4071 21 4468 24209 18295 18295 72 0 0 0 0 0 0 0 0 0 SLYQSKYE AQNEDIAQKSKAEAESLYQSKYEELQITAG KSKAEAESLYQSKYEELQITAGRHGDSVRN E S L Y E E 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 8 1 0 0 1016.4815 CON__P04264 CON__P04264 371 378 yes yes 2 0.0071365 67.981 By MS/MS By MS/MS 1 1 10698000 0 0 0 0 0 0 4285600 6412300 + 4072 9 4469 24210;24211 18296 18296 1 0 0 0 0 0 0 32983000 36799000 SLYQSKYEE AQNEDIAQKSKAEAESLYQSKYEELQITAG SKAEAESLYQSKYEELQITAGRHGDSVRNS E S L E E L 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 9 1 1 0 1145.5241 CON__P04264 CON__P04264 371 379 yes yes 2 0.0010757 86.794 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 344810000 17336000 17046000 29987000 32460000 30908000 31560000 87599000 97912000 + 4073 9 4470 24212;24213;24214;24215;24216;24217;24218;24219 18297;18298;18299;18300 18298 3 266360000 259960000 254800000 246100000 475860000 478340000 674180000 561900000 SMQDPIADMLTR ______________________________ ______________________________ M S M T R I 1 1 0 2 0 1 0 0 0 1 1 0 2 0 1 1 1 0 0 0 0 0 12 0 0 2 1376.6428 P0A7W7 P0A7W7 2 13 rpsH 30S ribosomal protein S8 yes yes 2 2.4382E-07 100.48 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19672000 4228800 4590200 0 0 3785900 7067100 0 0 4074 132 4471 24220;24221;24222;24223 18301;18302;18303;18304;18305 18304 5 4228800 4698600 0 0 4566900 7828800 0 0 SMYLEHHHHHH LPRQATPGVPAQQSPSMYLEHHHHHH____ QQSPSMYLEHHHHHH_______________ P S M H H - 0 0 0 0 0 0 1 0 6 0 1 0 1 0 0 1 0 0 1 0 0 0 11 0 1 0 1463.6265 LSD1-FL-His LSD1-FL-His 853 863 yes yes 3;4 6.4534E-10 94.692 By MS/MS By MS/MS By MS/MS By MS/MS 8 5 22 21 669490000 14667000 12586000 0 0 207840000 434400000 0 0 4075 24 4472;4473 24224;24225;24226;24227;24228;24229;24230;24231;24232;24233;24234;24235;24236;24237;24238;24239;24240;24241;24242;24243;24244;24245;24246;24247;24248;24249;24250;24251;24252;24253;24254;24255;24256;24257;24258;24259;24260;24261;24262;24263;24264;24265;24266;24267;24268;24269;24270;24271;24272;24273;24274;24275;24276;24277;24278;24279 18306;18307;18308;18309;18310;18311;18312;18313;18314;18315;18316;18317;18318;18319;18320;18321;18322;18323;18324;18325;18326;18327;18328;18329;18330;18331;18332;18333;18334;18335;18336;18337;18338;18339;18340;18341;18342;18343;18344;18345;18346;18347;18348;18349;18350;18351;18352;18353;18354;18355;18356;18357;18358 18339 39 51 88536000 75327000 0 0 333590000 653600000 0 0 SNAVYTAFK RAIAQAIVYLACAPKSNAVYTAFKAALADA LACAPKSNAVYTAFKAALADARERPDYDVP K S N F K A 2 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 1 1 0 0 9 0 0 2 999.50255 P0AAZ4 P0AAZ4 346 354 rarA Replication-associated recombination protein A yes yes 2 0.0013591 56.258 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 4076 189 4474 24280;24281;24282 18359;18360;18361 18361 3 0 0 0 0 0 0 0 0 SNDYVPRPASRPVTKFE LEVMSSIDGYKNLSESNDYVPRPASRPVTK DYVPRPASRPVTKFEQRGHRLGHGVWDLMF E S N F E Q 1 2 1 1 0 0 1 0 0 0 0 1 0 1 3 2 1 0 1 2 0 0 17 3 0 4 1961.9959 P0A8I5 P0A8I5 204 220 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3;4 5.5027E-27 102.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 1 1023600000 70416000 55709000 251160000 199040000 29004000 33334000 247900000 137050000 4077 144 4475 24283;24284;24285;24286;24287;24288;24289;24290;24291;24292;24293;24294;24295;24296;24297 18362;18363;18364;18365;18366;18367;18368;18369;18370;18371;18372;18373 18363 11 1081900000 849580000 2134000000 1509100000 446540000 505230000 1907900000 786530000 SNFALRE SKKVIGIGSPRASVESNFALRELVGEENFY GSPRASVESNFALRELVGEENFYTGIAHGE E S N R E L 1 1 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 7 1 0 1 835.41882 P33602 P33602 324 330 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.021024 58.679 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 139990000 7652800 0 24289000 27794000 5328600 5266600 30307000 39354000 4078 345 4476 24298;24299;24300;24301;24302;24303;24304;24305 18374 18374 1 117580000 0 206380000 210720000 76384000 79823000 233250000 225850000 SNFKPSAR HFAPDMLFQALHLYRSNFKPSARLEKPYAM QALHLYRSNFKPSARLEKPYAMVCINIIAA R S N A R L 1 1 1 0 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 0 8 1 0 2 905.47191 P0ADV5 P0ADV5 207 214 yhbW Uncharacterized protein YhbW yes yes 2 1.3172E-07 107.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 394750000 144440000 158060000 0 0 59741000 32512000 0 0 4079 226 4477 24306;24307;24308;24309 18375;18376;18377;18378 18376 3 144440000 161790000 0 0 72066000 36016000 0 0 SNIEEVR VIVVAPNNELLEKLKSNIEEVRARGGQLYV NELLEKLKSNIEEVRARGGQLYVFADQDAG K S N V R A 0 1 1 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 7 0 2 0 845.4243 P17169 P17169 532 538 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.0302E-11 130.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 2660200000 1466300000 1128400000 11530000 13192000 2607600 255480 17295000 20681000 4080 288 4478 24310;24311;24312;24313;24314;24315;24316;24317 18379;18380;18381 18379 3 1466300000 1155100000 97969000 100010000 3145600 3872200 133110000 118680000 SNIIKQLE ______________________________ ______________________________ M S N L E Q 0 0 1 0 0 1 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 8 1 0 0 943.53385 P0A7K6 P0A7K6 2 9 rplS 50S ribosomal protein L19 yes yes 2 4.7945E-25 145.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 364620000 31810000 20545000 55592000 55910000 26369000 23490000 64934000 85970000 4081 109 4479 24318;24319;24320;24321;24322;24323;24324;24325 18382;18383;18384;18385 18382 4 488760000 313320000 472360000 423890000 405970000 356030000 499750000 493370000 SNILLIGPTGSGK RLRNGDTSNGVELGKSNILLIGPTGSGKTL GKSNILLIGPTGSGKTLLAETLARLLDVPF K S N G K T 0 0 1 0 0 0 0 3 0 2 2 1 0 0 1 2 1 0 0 0 0 0 13 0 0 1 1255.7136 P0A6H1 P0A6H1 113 125 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 2 2.6114E-05 73.632 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32140000 12366000 7797900 0 0 5879700 6095700 0 0 4082 70 4480 24326;24327;24328;24329 18386;18387;18388;18389 18387 4 12366000 7981900 0 0 7092700 6752700 0 0 SNLLVLAGAGSGK DSLNDKQREAVAAPRSNLLVLAGAGSGKTR PRSNLLVLAGAGSGKTRVLVHRIAWLMSVE R S N G K T 2 0 1 0 0 0 0 3 0 0 3 1 0 0 0 2 0 0 0 1 0 0 13 0 0 2 1185.6717 P03018 P03018 23 35 uvrD DNA helicase II yes yes 2 0.00074908 56.951 By MS/MS By MS/MS 1 1 4192500 0 4192500 0 0 0 0 0 0 4083 41 4481 24330;24331 18390;18391 18390 1 0 4291500 0 0 0 0 0 0 SNLQYDAGDKGIYRHYMQKE IFDKTGAEVKRQDIESNLQYDAGDKGIYRH DAGDKGIYRHYMQKEIYEQPNAIKNTLTGR E S N K E I 1 1 1 2 0 2 1 2 1 1 1 2 1 0 0 1 0 0 3 0 0 0 20 3 0 1 2415.1277 P17169 P17169 237 256 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4 9.5297E-104 182.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 3 3 4 4 3 3 3986500000 531140000 504570000 310830000 273930000 295840000 263410000 640590000 1166200000 4084 288 4482;4483 24332;24333;24334;24335;24336;24337;24338;24339;24340;24341;24342;24343;24344;24345;24346;24347;24348;24349;24350;24351;24352;24353;24354;24355;24356;24357;24358;24359 18392;18393;18394;18395;18396;18397;18398;18399;18400;18401;18402;18403;18404;18405;18406;18407;18408;18409;18410;18411;18412;18413;18414;18415;18416;18417 18407 244 26 8160800000 7694700000 2641000000 2076900000 4554700000 3992400000 4930100000 6692500000 SNNTEPTWFPDSQNLAFTSDQAGRPQVYK MDLASGQIRQVTDGRSNNTEPTWFPDSQNL LAFTSDQAGRPQVYKVNINGGAPQRITWEG R S N Y K V 2 1 3 2 0 3 1 1 0 0 1 1 0 2 3 3 3 1 1 1 0 0 29 1 1 5 3297.5327 P0A855 P0A855 288 316 tolB Protein TolB yes yes 3 0.016011 22.239 By MS/MS By MS/MS By matching 1 1 1 13690000 3631800 5277300 0 0 4780500 0 0 0 4085 138 4484 24360;24361;24362 18418;18419 18419 2 3631800 5401800 0 0 5766800 0 0 0 SNSYDSSSIK ______________________________ ______________________________ M S N I K V 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 5 0 0 1 0 0 0 10 0 0 0 1086.4829 P0AES6 P0AES6 2 11 gyrB DNA gyrase subunit B yes yes 2 0.00025485 91.867 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 67837000 23335000 22246000 0 0 9398000 12858000 0 0 4086 239 4485 24363;24364;24365;24366 18420;18421 18420 2 23335000 22771000 0 0 11337000 14244000 0 0 SNTIVLK RAPHVSEKASTAMEKSNTIVLKVAKDATKA KASTAMEKSNTIVLKVAKDATKAEIKAAVQ K S N L K V 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 7 0 0 0 773.4647 P0ADZ0 P0ADZ0 27 33 rplW 50S ribosomal protein L23 yes yes 2 0.003861 52.018 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4087 230 4486 24367;24368 18422;18423 18423 2 0 0 0 0 0 0 0 0 SNVPALEACPQK VNQLVRKPRARKVAKSNVPALEACPQKRGV VAKSNVPALEACPQKRGVCTRVYTTTPKKP K S N Q K R 2 0 1 0 1 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 12 0 1 4 1312.6445 P0A7S3 P0A7S3 19 30 rpsL 30S ribosomal protein S12 yes yes 2 1.1779E-06 88.681 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 712930000 87771000 123760000 0 0 234570000 266830000 0 0 4088 122 4487 24369;24370;24371;24372 18424;18425;18426;18427 18425 4 87771000 126680000 0 0 282970000 295590000 0 0 SNVPALEACPQKR VNQLVRKPRARKVAKSNVPALEACPQKRGV AKSNVPALEACPQKRGVCTRVYTTTPKKPN K S N K R G 2 1 1 0 1 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 13 1 1 4 1468.7456 P0A7S3 P0A7S3 19 31 rpsL 30S ribosomal protein S12 yes yes 2;3 7.6209E-85 184.9 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1775400000 597370000 445910000 0 0 423940000 308170000 0 0 4089 122 4488 24373;24374;24375;24376;24377;24378;24379;24380 18428;18429;18430;18431;18432;18433;18434;18435;18436 18432 9 597370000 456430000 0 0 511400000 341380000 0 0 SPEWSAFGIRPPLR AFKKQFAQTPALYRRSPEWSAFGIRPPLRL RSPEWSAFGIRPPLRLGEFTMPEHKFVTLE R S P L R L 1 2 0 0 0 0 1 1 0 1 1 0 0 1 3 2 0 1 0 0 0 0 14 1 1 4 1611.8522 P0ACI0 P0ACI0 106 119 rob Right origin-binding protein yes yes 3 8.7492E-51 158.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 121360000 27489000 24477000 0 0 36119000 33277000 0 0 4090 211 4489 24381;24382;24383;24384;24385 18437;18438;18439;18440;18441;18442 18441 6 27489000 25055000 0 0 43842000 36863000 0 0 SPFILLADKKISNIRE PYFINKPETGAVELESPFILLADKKISNIR PFILLADKKISNIREMLPVLEAVAKAGKPL E S P R E M 1 1 1 1 0 0 1 0 0 3 2 2 0 1 1 2 0 0 0 0 0 0 16 3 0 2 1843.0567 P0A6F5 P0A6F5 217 232 groL 60 kDa chaperonin yes yes 2;3 7.044E-171 215.51 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 4 4 2 1 4 7 5808100000 160810000 265500000 814440000 1300100000 404660000 394810000 875400000 1592400000 4091 68 4490 24386;24387;24388;24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401;24402;24403;24404;24405;24406;24407;24408;24409;24410 18443;18444;18445;18446;18447;18448;18449;18450;18451;18452;18453;18454;18455;18456;18457;18458;18459;18460;18461;18462;18463;18464;18465;18466;18467;18468;18469 18450 25 2470800000 4048800000 6920200000 9856800000 6230100000 5983900000 6737300000 9138400000 SPGVFFDSDK VINGTERVIVSQLHRSPGVFFDSDKGKTHS SQLHRSPGVFFDSDKGKTHSSGKVLYNARI R S P D K G 0 0 0 2 0 0 0 1 0 0 0 1 0 2 1 2 0 0 0 1 0 0 10 0 0 1 1097.5029 P0A8V2 P0A8V2 152 161 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0011331 50.297 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4092 154 4491 24411;24412 18470;18471 18470 2 0 0 0 0 0 0 0 0 SPHVAALGSEAGGTLYGLQVLER TESTSAAMEKVAQAKSPHVAALGSEAGGTL SEAGGTLYGLQVLERIEANQRQNFTRFVVL K S P E R I 3 1 0 0 0 1 2 4 1 0 4 0 0 0 1 2 1 0 1 2 0 0 23 0 2 4 2324.2125 P0A9J8 P0A9J8 246 268 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 6.1286E-175 213.15 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 883110000 204980000 212780000 0 0 215060000 250290000 0 0 4093 166 4492 24413;24414;24415;24416;24417;24418;24419;24420;24421 18472;18473;18474;18475;18476;18477;18478;18479;18480;18481 18472 10 210240000 217800000 0 0 259420000 277270000 0 0 SPILGYWK ______________________________ ______________________________ M S P W K I 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 1 0 1 1 0 0 0 8 0 0 1 962.52255 GST-Nek6 GST-Nek6 2 9 yes yes 2 0.013213 50.898 By matching By MS/MS By MS/MS 1 1 1 478350000 0 0 0 3237900 221860000 253250000 0 0 4094 23 4493 24422;24423;24424 18482 18482 1 0 0 0 24548000 267630000 280550000 0 0 SPILLYSDFK VFCEAEGQAHRLSFKSPILLYSDFKQLTTM RLSFKSPILLYSDFKQLTTMKEEHYRADTL K S P F K Q 0 0 0 1 0 0 0 0 0 1 2 1 0 1 1 2 0 0 1 0 0 0 10 0 0 1 1181.6332 P09831 P09831 554 563 gltB Glutamate synthase [NADPH] large chain yes yes 2 0.0093569 49.715 By matching By MS/MS 1 1 4814600 2331100 2483400 0 0 0 0 0 0 4095 64 4494 24425;24426 18483 18483 1 2331100 2542000 0 0 0 0 0 0 SPKLPQRLP YREKFREDDPSAHLASPKLPQRLPKDLSEA PSAHLASPKLPQRLPKDLSEAQVERLLQAP A S P L P K 0 1 0 0 0 1 0 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 9 2 0 2 1034.6237 P0A8P8 P0A8P8 102 110 xerD Tyrosine recombinase XerD yes yes 2 0.020625 56.721 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21413000 1266400 1682000 0 0 12970000 5494000 0 0 4096 151 4495 24427;24428;24429;24430 18484 18484 0 7644700 10067000 0 0 18466000 7831600 0 0 SPMAVASSRLNVE LLDKNPQAKVVFVDESPMAVASSRLNVETN DESPMAVASSRLNVETNMPEALDRCEFMIN E S P V E T 2 1 1 0 0 0 1 0 0 0 1 0 1 0 1 3 0 0 0 2 0 0 13 1 0 3 1359.6816 P42596 P42596 261 273 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 3.5667E-08 78.655 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 1 1 3 2 43374000 9221900 5618400 3891000 4149800 0 0 7542200 12951000 4097 366 4496;4497 24431;24432;24433;24434;24435;24436;24437;24438;24439;24440;24441;24442;24443;24444 18485;18486;18487;18488;18489;18490;18491;18492;18493 18486 296 9 118200000 85681000 33061000 31462000 0 0 58046000 74323000 SPSFGEYYSHPR ESYQERVEGNKVRERSPSFGEYYSHPRLFW RERSPSFGEYYSHPRLFWLSQTPFEQRHIV R S P P R L 0 1 0 0 0 0 1 1 1 0 0 0 0 1 2 3 0 0 2 0 0 0 12 0 1 2 1425.6313 P21179 P21179 498 509 katE Catalase HPII yes yes 2;3 3.0578E-70 177.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 269920000 60526000 58698000 0 0 59004000 91691000 0 0 4098 293 4498 24445;24446;24447;24448;24449;24450;24451;24452 18494;18495;18496;18497;18498;18499;18500;18501 18494 8 60526000 60083000 0 0 71177000 101570000 0 0 SPTGYLHVGGARTA ______________________________ PSPTGYLHVGGARTALYSWLFARNHGGEFV P S P T A L 2 1 0 0 0 0 0 3 1 0 1 0 0 0 1 1 2 0 1 1 0 0 14 1 0 2 1385.7052 P04805 P04805 10 23 gltX Glutamate--tRNA ligase yes yes 3 0.011715 39.509 By matching By MS/MS 1 1 8586900 0 0 0 0 4129400 4457500 0 0 4099 45 4499 24453;24454 18502 18502 1 0 0 0 0 5879000 6354100 0 0 SPVADDTAEQFAKGVQLHNE SPRHHCEKTYLVTLESPVADDTAEQFAKGV DTAEQFAKGVQLHNEKDLTKPAVLEVITPT E S P N E K 3 0 1 2 0 2 2 1 1 0 1 1 0 1 1 1 1 0 0 2 0 0 20 1 1 4 2155.0182 P0AA43 P0AA43 138 157 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2;3 8.8053E-76 195.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 2 1 1488400000 14859000 11214000 351540000 337960000 33731000 31000000 320290000 387830000 4100 183 4500 24455;24456;24457;24458;24459;24460;24461;24462;24463;24464 18503;18504;18505;18506;18507;18508;18509;18510;18511 18510 9 228300000 171010000 2987000000 2562200000 519320000 469850000 2465100000 2225700000 SPVADDTAEQFAKGVQLHNEKDLTKPAVLE SPRHHCEKTYLVTLESPVADDTAEQFAKGV QLHNEKDLTKPAVLEVITPTQVRLTISEGR E S P L E V 4 0 1 3 0 2 3 1 1 0 3 3 0 1 2 1 2 0 0 3 0 0 30 3 2 6 3249.6517 P0AA43 P0AA43 138 167 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 4 0.0011592 24.835 By MS/MS By matching By MS/MS 1 1 1 22295000 0 0 0 0 7486900 5438900 0 9369400 4101 183 4501 24465;24466;24467 18512 18512 1 0 0 0 0 115270000 82435000 0 53769000 SPVSAPLDYLHGHGSLISGLE LAYQVRTEDGVLVDESPVSAPLDYLHGHGS LDYLHGHGSLISGLETALEGHEVGDKFDVA E S P L E T 1 0 0 1 0 0 1 3 2 1 4 0 0 0 2 4 0 0 1 1 0 0 21 0 0 3 2148.0851 P0A9K9 P0A9K9 26 46 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 4.8769E-215 297.91 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 1 1 2 2 1 2 3056000000 84226000 93663000 23309000 9900700 1627800000 1206600000 6266500 4198100 4102 169 4502 24468;24469;24470;24471;24472;24473;24474;24475;24476;24477;24478;24479;24480;24481 18513;18514;18515;18516;18517;18518;18519;18520;18521;18522;18523;18524 18522 12 1294100000 1428400000 198050000 75063000 25062000000 18288000000 48229000 24092000 SQDLASQAEESFVEAE TLYLGAVAATVREGRSQDLASQAEESFVEA QDLASQAEESFVEAE_______________ R S Q A E - 3 0 0 1 0 2 4 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 16 0 3 3 1738.7534 P0A7V0 P0A7V0 226 241 rpsB 30S ribosomal protein S2 yes yes 2 2.8093E-116 196.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 189260000 48652000 52637000 0 0 48538000 39434000 0 0 4103 128 4503 24482;24483;24484;24485 18525;18526;18527;18528;18529 18526 5 48652000 53880000 0 0 58552000 43684000 0 0 SQGSEFDHAALILPSQR RLPEHETTWAMTVHKSQGSEFDHAALILPS GSEFDHAALILPSQRTPVVTRELVYTAVTR K S Q Q R T 2 1 0 1 0 2 1 1 1 1 2 0 0 1 1 3 0 0 0 0 0 0 17 0 1 3 1854.9224 P04993 P04993 541 557 recD RecBCD enzyme subunit RecD yes yes 3 6.6196E-12 72.772 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 98767000 20351000 26480000 0 0 26331000 25605000 0 0 4104 46 4504 24486;24487;24488;24489 18530;18531;18532;18533 18533 4 20351000 27105000 0 0 31763000 28365000 0 0 SQHNEKNPHQHQSPLHDSSE ______________________________ KNPHQHQSPLHDSSEAKPGMDSLAPEDGSH M S Q S E A 0 0 2 1 0 3 2 0 4 0 1 1 0 0 2 4 0 0 0 0 0 0 20 1 1 2 2335.0326 P21179 P21179 2 21 katE Catalase HPII yes yes 4 0.016761 18.058 By MS/MS By MS/MS 1 1 9553200 0 0 0 0 4135000 5418100 0 0 4105 293 4505 24490;24491 18534 18534 0 0 0 0 0 63663000 82120000 0 0 SQKYLFIDRDGTLISEPP ______________________________ YLFIDRDGTLISEPPSDFQVDRFDKLAFEP M S Q P P S 0 1 0 2 0 1 1 1 0 2 2 1 0 1 2 2 1 0 1 0 0 0 18 2 1 1 2078.0684 P06987 P06987 2 19 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3 0.0025206 34.498 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45678000 1157200 1733000 0 0 13543000 29244000 0 0 4106 55 4506 24492;24493;24494;24495 18535;18536 18536 2 6985200 10372000 0 0 19282000 41688000 0 0 SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFE ______________________________ PSDFQVDRFDKLAFEPGVIPELLKLQKAGY M S Q F E P 1 2 0 5 0 2 2 1 0 2 3 2 0 4 2 3 1 0 1 1 0 0 32 4 1 3 3775.8734 P06987 P06987 2 33 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 5 0.0049257 20.452 By MS/MS By MS/MS 1 1 23630000 0 0 0 0 11764000 11866000 0 0 4107 55 4507 24496;24497 18537;18538 18537 2 0 0 0 0 181120000 179850000 0 0 SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPE ______________________________ DRFDKLAFEPGVIPELLKLQKAGYKLVMIT M S Q P E L 1 2 0 5 0 2 3 2 0 3 3 2 0 4 4 3 1 0 1 2 0 0 38 4 2 5 4368.1954 P06987 P06987 2 39 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 4;5 8.6481E-55 117.54 By MS/MS By MS/MS 2 2 472730000 0 0 0 0 197360000 275370000 0 0 4108 55 4508 24498;24499;24500;24501 18539;18540;18541;18542 18542 4 0 0 0 0 3038500000 4173600000 0 0 SQLTHINAAGE ______________________________ ______________________________ M S Q G E A 2 0 1 0 0 1 1 1 1 1 1 0 0 0 0 1 1 0 0 0 0 0 11 0 0 2 1139.5571 P0A738 P0A738 2 12 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 5.1279E-14 149.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 1 1 2 2 625900000 41928000 52372000 99200000 113560000 37298000 30801000 104580000 146160000 4109 93 4509;4510;4511 24502;24503;24504;24505;24506;24507;24508;24509;24510;24511;24512;24513;24514;24515;24516;24517 18543;18544;18545;18546;18547;18548;18549;18550;18551 18546 6 644220000 798680000 842890000 860960000 574240000 466830000 804890000 838770000 SQLTHINAAGEAHMVDVSAK ______________________________ INAAGEAHMVDVSAKAETVREARAEAFVTM M S Q A K A 4 0 1 1 0 1 1 1 2 1 1 1 1 0 0 2 1 0 0 2 0 0 20 0 1 4 2078.0215 P0A738 P0A738 2 21 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 3;4 7.4358E-166 214.49 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 346530000 105870000 95831000 0 0 63472000 81353000 0 0 4110 93 4512;4513 24518;24519;24520;24521;24522;24523;24524;24525;24526;24527 18552;18553;18554;18555;18556;18557;18558;18559;18560 18553 103 9 105870000 98093000 0 0 76566000 90121000 0 0 SQNTLKVHDLNE ______________________________ ______________________________ M S Q N E D 0 0 2 1 0 1 1 0 1 0 2 1 0 0 0 1 1 0 0 1 0 0 12 1 0 0 1396.6947 P13445 P13445 2 13 rpoS RNA polymerase sigma factor RpoS yes yes 3 2.7302E-10 88.803 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 233270000 46811000 55149000 19219000 23384000 18646000 20986000 21566000 27510000 4111 279 4514 24528;24529;24530;24531;24532;24533;24534;24535 18561;18562;18563;18564 18562 4 719230000 841040000 163300000 177290000 287070000 318070000 165980000 157870000 SQVPFAWAPGWNSPQAWNK FTFSMEGNNQPTAHRSQVPFAWAPGWNSPQ FAWAPGWNSPQAWNKFQDEVGGKLRFGDPG R S Q N K F 3 0 2 0 0 2 0 1 0 0 0 1 0 1 3 2 0 3 0 1 0 0 19 0 0 6 2170.0385 P33602 P33602 749 767 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.0058E-43 173.25 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 146660000 50774000 49350000 0 0 16774000 29759000 0 0 4112 345 4515 24536;24537;24538;24539 18565;18566;18567;18568 18566 4 50774000 50515000 0 0 20235000 32966000 0 0 SQYEQLAEQNR AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NNMRSQYEQLAEQNRKDAEAWFNEKSKELT R S Q N R K 1 1 1 0 0 3 2 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 11 0 2 1 1364.6321 CON__P13645 CON__P13645 323 333 yes yes 2 6.7223E-155 264.9 By MS/MS By MS/MS By matching 1 1 1 73210000 37665000 34622000 0 0 922570 0 0 0 + 4113 12 4516 24540;24541;24542 18569;18570 18569 2 37665000 35439000 0 0 1112900 0 0 0 SQYEQLAEQNRK AAPGVDLTQLLNNMRSQYEQLAEQNRKDAE NMRSQYEQLAEQNRKDAEAWFNEKSKELTT R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 12 1 2 1 1492.727 CON__P13645 CON__P13645 323 334 yes yes 2;3 0 276.61 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 921390000 180650000 192900000 0 0 266680000 281160000 0 0 + 4114 12 4517 24543;24544;24545;24546;24547;24548;24549;24550 18571;18572;18573;18574;18575;18576;18577 18572 7 180650000 197450000 0 0 321690000 311460000 0 0 SRDPGDSAEMMQAR AKEGYVNLLPVQHKRSRDPGDSAEMMQARR RSRDPGDSAEMMQARRAFLDAGHYQPLRDA R S R A R R 2 2 0 2 0 1 1 1 0 0 0 0 2 0 1 2 0 0 0 0 0 0 14 1 1 3 1549.6613 P36999 P36999 45 58 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 7.6023E-190 228.62 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 664590000 219710000 205020000 0 0 137120000 102750000 0 0 4115 352 4518;4519;4520 24551;24552;24553;24554;24555;24556;24557;24558;24559;24560;24561;24562;24563;24564;24565;24566 18578;18579;18580;18581;18582;18583;18584;18585;18586;18587;18588;18589;18590;18591;18592 18588 288;289 15 219710000 209850000 0 0 165410000 113820000 0 0 SRDPQLQVVTNK EDLAVLAKRLEDQQRSRDPQLQVVTNKAIE QQRSRDPQLQVVTNKAIELKGHKMQQLDSI R S R N K A 0 1 1 1 0 2 0 0 0 0 1 1 0 0 1 1 1 0 0 2 0 0 12 1 0 1 1383.747 P0AEE1 P0AEE1 109 120 dcrB Protein DcrB yes yes 2 4.455E-06 59.542 By matching By MS/MS By MS/MS 1 1 1 5893000 2600200 0 0 0 3292900 0 0 0 4116 236 4521 24567;24568;24569 18593;18594 18594 2 2600200 0 0 0 3972200 0 0 0 SRGAHSRFDFPDRDDE ETAYATAVSANFRTESRGAHSRFDFPDRDD RGAHSRFDFPDRDDENWLCHSLYLPESESM E S R D E N 1 3 0 4 0 0 1 1 1 0 0 0 0 2 1 2 0 0 0 0 0 0 16 3 0 2 1905.8354 P0AC41 P0AC41 536 551 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3;4 8.8703E-23 95.428 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 3 3 3 3 616920000 56869000 45108000 76631000 113240000 25769000 28057000 107610000 163640000 4117 203 4522 24570;24571;24572;24573;24574;24575;24576;24577;24578;24579;24580;24581;24582;24583;24584;24585;24586;24587;24588;24589;24590;24591 18595;18596;18597;18598;18599;18600;18601;18602;18603;18604;18605;18606;18607;18608;18609;18610 18599 16 868270000 687900000 651120000 858500000 396740000 425240000 828210000 939100000 SRLPGILE HAKLKLDHLGKEVLESRLPGILELSRTFAH LGKEVLESRLPGILELSRTFAHVDPVKEPI E S R L E L 0 1 0 0 0 0 1 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 8 1 0 1 883.51272 P0AC41 P0AC41 325 332 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.0045695 92.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 131440000 31390000 38171000 0 0 30158000 31722000 0 0 4118 203 4523 24592;24593;24594;24595;24596 18611;18612;18613 18613 3 482290000 582120000 0 0 464310000 472530000 0 0 SRPIHGNPWEE LLVLRNHNLIMTRLESRPIHGNPWEEMFYL TRLESRPIHGNPWEEMFYLDIQANLESAEM E S R E E M 0 1 1 0 0 0 2 1 1 1 0 0 0 0 2 1 0 1 0 0 0 0 11 1 1 2 1320.6211 P0A9J8 P0A9J8 330 340 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2;3 1.1075E-05 99.568 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 254310000 20479000 20092000 83171000 60073000 7377100 10184000 26651000 26279000 4119 166 4524 24597;24598;24599;24600;24601;24602;24603;24604;24605;24606;24607;24608;24609;24610;24611;24612 18614;18615;18616;18617;18618;18619;18620;18621;18622;18623;18624 18615 10 314650000 306400000 706690000 455450000 113580000 154360000 205120000 150810000 SRPSLPER QATVNRIDNYEVVGKSRPSLPERIDNVLVC NYEVVGKSRPSLPERIDNVLVCPNSNCISH K S R E R I 0 2 0 0 0 0 1 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 1 1 2 940.50903 P0A7F3 P0A7F3 95 102 pyrI Aspartate carbamoyltransferase regulatory chain yes yes 2 0.0075935 72.485 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16155000 5338900 4319200 0 0 3176700 3320400 0 0 4120 103 4525 24613;24614;24615;24616 18625;18626;18627 18626 3 5338900 4421100 0 0 3832100 3678200 0 0 SRTEAESWYQTK IIAEVKAQYEEIANRSRTEAESWYQTKYEE ANRSRTEAESWYQTKYEELQQTAGRHGDDL R S R T K Y 1 1 0 0 0 1 2 0 0 0 0 1 0 0 0 2 2 1 1 0 0 0 12 1 2 1 1484.6896 CON__P13647 CON__P13647 353 364 no no 3 0.0040112 30.874 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 4121 13 4526 24617 18628 18628 1 0 0 0 0 0 0 0 0 SRYVVLARE RLLDSLEDIVAVLGESRYVVLARELTKTWE VAVLGESRYVVLARELTKTWETIHGAPVGE E S R R E L 1 2 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 9 2 0 1 1091.6087 P67087 P67087 189 197 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2;3 0.0057676 59.426 By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 42168000 0 0 4069100 7325000 0 0 13634000 17140000 4122 400 4527 24618;24619;24620;24621;24622;24623;24624 18629;18630;18631 18631 3 0 0 34574000 55535000 0 0 104930000 98366000 SSFADILNHADNVINQQTR FNQNPLYSDHSRLLRSSFADILNHADNVIN DILNHADNVINQQTRMRQGFYERNHCEILQ R S S T R M 2 1 3 2 0 2 0 0 1 2 1 0 0 1 0 2 1 0 0 1 0 0 19 0 0 2 2142.0454 P27306 P27306 81 99 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2;3 3.7984E-77 170.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 173310000 44538000 50433000 0 0 39425000 38911000 0 0 4123 323 4528 24625;24626;24627;24628;24629;24630;24631 18632;18633;18634;18635;18636;18637;18638;18639 18638 8 44538000 51624000 0 0 47558000 43104000 0 0 SSFYGPFREA GFKDTAIMSYSTKFASSFYGPFREAAGSAL STKFASSFYGPFREAAGSALKGDRKSYQMN A S S E A A 1 1 0 0 0 0 1 1 0 0 0 0 0 2 1 2 0 0 1 0 0 0 10 1 1 1 1159.5298 P0ACB2 P0ACB2 198 207 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.0034536 52.255 By MS/MS By MS/MS 1 1 4823200 0 0 0 0 3437300 1385800 0 0 4124 207 4529 24632;24633 18640 18640 0 0 0 0 0 4893700 1975500 0 0 SSGDLRGVQE HPHKLRHSFATHMLESSGDLRGVQELLGHA THMLESSGDLRGVQELLGHANLSTTQIYTH E S S Q E L 0 1 0 1 0 1 1 2 0 0 1 0 0 0 0 2 0 0 0 1 0 0 10 1 0 0 1046.4993 P0A8P6 P0A8P6 253 262 xerC Tyrosine recombinase XerC yes yes 2 0.0098129 52.482 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 19725000 9162900 7662100 0 0 1400200 1499700 0 0 4125 150 4530 24634;24635;24636;24637;24638;24639 18641;18642 18642 2 66859000 42941000 0 0 21558000 22731000 0 0 SSGPDVSRE IVFIDEIDKICKRGESSGPDVSREGVQRDL ICKRGESSGPDVSREGVQRDLLPLVEGCTV E S S R E G 0 1 0 1 0 0 1 1 0 0 0 0 0 0 1 3 0 0 0 1 0 0 9 1 0 1 932.41994 P0A6H5 P0A6H5 267 275 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.021316 43.083 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70314000 0 0 12901000 15547000 0 0 18622000 23243000 4126 71 4531 24640;24641;24642;24643 18643 18643 0 0 0 109620000 117870000 0 0 143320000 133390000 SSILAAEETR HDIVSLAKNHPQRQRSSILAAEETRRLLRE PQRQRSSILAAEETRRLLREEFEQFPAEKI R S S T R R 2 1 0 0 0 0 2 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 10 0 2 2 1075.551 P46144 P46144 73 82 yedJ Uncharacterized protein YedJ yes yes 2 8.9297E-09 101.46 By MS/MS By MS/MS By MS/MS 1 1 1 11551000 0 0 0 0 11551000 0 0 0 4127 371 4532 24644;24645;24646 18644;18645;18646 18644 3 0 0 0 0 13934000 0 0 0 SSILAAEETRR HDIVSLAKNHPQRQRSSILAAEETRRLLRE QRQRSSILAAEETRRLLREEFEQFPAEKIE R S S R R L 2 2 0 0 0 0 2 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 11 1 2 2 1231.6521 P46144 P46144 73 83 yedJ Uncharacterized protein YedJ yes yes 2 0.022169 38.293 By matching By matching By MS/MS 1 1 1 48778000 17972000 24626000 0 0 0 6180300 0 0 4128 371 4533 24647;24648;24649 18647 18647 1 17972000 25207000 0 0 0 6846400 0 0 SSMLGTSLVLPVHK EHDYEGADDMPSHIKSSMLGTSLVLPVHKG KSSMLGTSLVLPVHKGRIQTGTWQGIWLGE K S S H K G 0 0 0 0 0 0 0 1 1 0 3 1 1 0 1 3 1 0 0 2 0 0 14 0 0 1 1467.8119 P0AF48 P0AF48 93 106 yjbQ UPF0047 protein YjbQ yes yes 2;3 5.0404E-24 134.75 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 434070000 117360000 99486000 0 0 101050000 116170000 0 0 4129 243 4534;4535 24650;24651;24652;24653;24654;24655;24656;24657;24658;24659;24660;24661 18648;18649;18650;18651;18652;18653;18654;18655;18656;18657;18658;18659;18660 18653 215 13 117360000 101830000 0 0 121900000 128690000 0 0 SSPHLELLR EKIYYITADSYAAAKSSPHLELLRKKGIEV SYAAAKSSPHLELLRKKGIEVLLLSDRIDE K S S L R K 0 1 0 0 0 0 1 0 1 0 3 0 0 0 1 2 0 0 0 0 0 0 9 0 1 1 1050.5822 P0A6Z3 P0A6Z3 443 451 htpG Chaperone protein HtpG yes yes 3 0.0015332 57.032 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 121310000 41157000 32456000 0 0 18755000 28941000 0 0 4130 88 4536 24662;24663;24664;24665 18661;18662;18663;18664 18661 4 41157000 33222000 0 0 22625000 32060000 0 0 SSQTPWTLDPVAVGALDYR QPRAQAMRAAVEQAKSSQTPWTLDPVAVGA PWTLDPVAVGALDYRRHFCHELLSFKPAAI K S S Y R R 2 1 0 2 0 1 0 1 0 0 2 0 0 0 2 2 2 1 1 2 0 0 19 0 0 4 2075.0324 P76423 P76423 91 109 thiM Hydroxyethylthiazole kinase yes yes 2 5.3667E-235 241.41 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1324200000 410650000 555930000 0 0 6776500 350800000 0 0 4131 426 4537 24666;24667;24668;24669;24670 18665;18666;18667 18666 3 410650000 569060000 0 0 104330000 561620000 0 0 SSQTPWTLDPVAVGALDYRR QPRAQAMRAAVEQAKSSQTPWTLDPVAVGA WTLDPVAVGALDYRRHFCHELLSFKPAAIR K S S R R H 2 2 0 2 0 1 0 1 0 0 2 0 0 0 2 2 2 1 1 2 0 0 20 1 0 4 2231.1335 P76423 P76423 91 110 thiM Hydroxyethylthiazole kinase yes yes 3 7.6071E-05 45.704 By MS/MS By matching 1 1 9669500 4521700 5147700 0 0 0 0 0 0 4132 426 4538 24671;24672 18668 18668 1 4521700 5269200 0 0 0 0 0 0 SSRLNVETNMP QAKVVFVDESPMAVASSRLNVETNMPEALD MAVASSRLNVETNMPEALDRCEFMINNALS A S S M P E 0 1 2 0 0 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 0 0 11 1 1 0 1246.5976 P42596 P42596 267 277 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 2.6339E-06 93.551 By MS/MS By MS/MS 1 2 29435000 0 0 0 0 15711000 13724000 0 0 4133 366 4539 24673;24674;24675 18669;18670 18669 2 0 0 0 0 22367000 18512000 0 0 SSSYYGKGYQDVE LRHHFPPFAGFRVVESSSYYGKGYQDVEHR VESSSYYGKGYQDVEHRKPSIRNAHRCLDW E S S V E H 0 0 0 1 0 1 1 2 0 0 0 1 0 0 0 3 0 0 3 1 0 0 13 1 0 0 1481.6311 P77398 P77398 605 617 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 9.5107E-67 209.8 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1903100000 247220000 228930000 355570000 0 98079000 93640000 365250000 514390000 4134 432 4540 24676;24677;24678;24679;24680;24681;24682 18671;18672;18673;18674;18675;18676 18672 6 3798500000 3491300000 3021200000 0 1510000000 1419300000 2811100000 2952000000 SSVDILVPDLPE ______________________________ ______________________________ M S S P E S 0 0 0 2 0 0 1 0 0 1 2 0 0 0 2 2 0 0 0 2 0 0 12 0 0 2 1282.6656 P0AFG6 P0AFG6 2 13 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 2 1.5805E-05 69.423 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 15984000 5494700 3383800 0 0 2401900 0 2722400 1981400 4135 247 4541 24683;24684;24685;24686;24687 18677 18677 1 84425000 51603000 0 0 36980000 0 20952000 11371000 SSYHADLQAK LAMGFTHAACGPFVRSSYHADLQAKGMEVK GPFVRSSYHADLQAKGMEVK__________ R S S A K G 2 0 0 1 0 1 0 0 1 0 1 1 0 0 0 2 0 0 1 0 0 0 10 0 0 2 1118.5356 P60716 P60716 307 316 lipA Lipoyl synthase yes yes 2;3 1.0115E-05 112.71 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 49220000 16932000 18651000 0 0 8358100 5278800 0 0 4136 382 4542 24688;24689;24690;24691;24692;24693;24694 18678;18679;18680;18681;18682 18679 5 16932000 19092000 0 0 10082000 5847700 0 0 SSYNPDGNPLTIGEDVTVGHK RTNIQDGSMLHVTHKSSYNPDGNPLTIGED GNPLTIGEDVTVGHKVMLHGCTIGNRVLVG K S S H K V 0 0 2 2 0 0 1 3 1 1 1 1 0 0 2 2 2 0 1 2 0 0 21 0 1 2 2199.0444 P0A9W9 P0A9W9 72 92 yrdA Protein YrdA yes yes 2;3 1.2519E-76 133.21 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 507140000 132310000 103330000 0 0 132410000 139100000 0 0 4137 179 4543 24695;24696;24697;24698;24699;24700;24701;24702 18683;18684;18685;18686;18687 18684 3 132310000 105760000 0 0 159730000 154090000 0 0 STAESIVYSALETLAQR LLAKFVNILMVDGKKSTAESIVYSALETLA AESIVYSALETLAQRSGKSELEAFEVALEN K S T Q R S 3 1 0 0 0 1 2 0 0 1 2 0 0 0 0 3 2 0 1 1 0 0 17 0 2 3 1837.9422 P02359 P02359 37 53 rpsG 30S ribosomal protein S7 yes yes 3 0.0064676 31.801 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 70860000 17028000 13439000 0 0 27575000 12818000 0 0 4138 36 4544 24703;24704;24705;24706 18688 18688 1 17028000 13757000 0 0 33263000 14200000 0 0 STCTGVEMFR VGEEVEIVGIKETQKSTCTGVEMFRKLLDE KETQKSTCTGVEMFRKLLDEGRAGENVGVL K S T F R K 0 1 0 0 1 0 1 1 0 0 0 0 1 1 0 1 2 0 0 1 0 0 10 0 1 0 1186.5111 P0CE48;P0CE47 P0CE48 254 263 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 0.00078492 72.879 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45428000 7727200 8256700 0 0 10223000 19220000 0 0 4139 269 4545 24707;24708;24709;24710 18689;18690;18691;18692;18693 18692 4 7727200 8451600 0 0 12332000 21292000 0 0 STENIGARRLHTVLE SGIKRIAEAAWQVNESTENIGARRLHTVLE STENIGARRLHTVLERLMEEISYDASDLSG E S T L E R 1 2 1 0 0 0 2 1 1 1 2 0 0 0 0 1 2 0 0 1 0 0 15 2 1 1 1694.9064 P0A6H5 P0A6H5 386 400 hslU ATP-dependent protease ATPase subunit HslU yes yes 3 0.0015398 40.941 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 1 50146000 3058000 9500100 0 2829200 9334800 1395300 9964200 14065000 4140 71 4546 24711;24712;24713;24714;24715;24716;24717;24718;24719 18694;18695;18696;18697 18696 4 46985000 47307000 0 21450000 43071000 21149000 76687000 80716000 STFQQLPGTGVKPDQFHSQTR EDFLTDPDSVDANWRSTFQQLPGTGVKPDQ PGTGVKPDQFHSQTREYFRRLAKDASRYSS R S T T R E 0 1 0 1 0 4 0 2 1 0 1 1 0 2 2 2 3 0 0 1 0 0 21 1 0 2 2358.1717 P0AFG3 P0AFG3 43 63 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3;4 2.3473E-115 181.64 By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 2 2 3 1 845200000 198390000 182800000 0 0 136080000 169120000 0 158800000 4141 246 4547 24720;24721;24722;24723;24724;24725;24726;24727;24728;24729;24730 18698;18699;18700;18701;18702 18701 5 310410000 187110000 0 0 164160000 231900000 0 911340000 STGVLTGPDWLR ETGETWQSIPTDRLRSTGVLTGPDWLRMGL RLRSTGVLTGPDWLRMGLSSRRWTHVVWMG R S T L R M 0 1 0 1 0 0 0 2 0 0 2 0 0 0 1 1 2 1 0 1 0 0 12 0 0 1 1300.6776 P11290 P11290 143 154 yibD Uncharacterized glycosyltransferase YibD yes yes 2 0.0069362 50.353 By MS/MS By MS/MS By matching By matching 1 1 1 1 9139100 2296100 2625100 0 0 1895000 2322900 0 0 4142 275 4548 24731;24732;24733;24734 18703;18704 18703 1 2296100 2687100 0 0 2286000 2573200 0 0 STHGQTAPSTGGRQGSRHE SRSFLYQVSSHEQSESTHGQTAPSTGGRQG QTAPSTGGRQGSRHEQARNSSRHSASQDGQ E S T H E Q 1 2 0 0 0 2 1 4 2 0 0 0 0 0 1 3 3 0 0 0 0 0 19 2 0 2 1949.9052 CON__P20930 CON__P20930 1453 1471 yes yes 3;4 0.0027288 32.091 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 1 9929000 3878900 3507400 1374400 0 374570 793750 0 0 + 4143 14 4549 24735;24736;24737;24738;24739;24740;24741 18705;18706 18706 2 59598000 53489000 11678000 0 5766900 12031000 0 0 STIEVIKKGK VLVVDIDQPLEGVVASTIEVIKKGK_____ EGVVASTIEVIKKGK_______________ A S T G K - 0 0 0 0 0 0 1 1 0 2 0 3 0 0 0 1 1 0 0 1 0 0 10 2 1 0 1101.6758 P46859 P46859 166 175 gntK Thermoresistant gluconokinase yes yes 2;3 0.0031077 80.438 By MS/MS By MS/MS By MS/MS 2 2 2 17724000 3994200 3699400 0 0 0 10030000 0 0 4144 372 4550 24742;24743;24744;24745;24746;24747 18707;18708 18708 1 24111000 22141000 0 0 0 14298000 0 0 STLIHQGEK EWFLSHCHIHKYPSKSTLIHQGEKAETLYY HKYPSKSTLIHQGEKAETLYYIVKGSVAVL K S T E K A 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 1 1 0 0 0 0 0 9 0 1 0 1011.5349 P0ACJ8 P0ACJ8 28 36 crp cAMP-activated global transcriptional regulator CRP yes yes 2 8.1809E-199 243.33 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 6406500000 2064400000 2193700000 0 0 1161600000 986820000 0 0 4145 213 4551 24748;24749;24750;24751;24752;24753;24754;24755 18709;18710;18711;18712;18713 18713 5 2076200000 2252000000 0 0 1415100000 1101100000 0 0 STLIHQGEKAETLYYIVK EWFLSHCHIHKYPSKSTLIHQGEKAETLYY IHQGEKAETLYYIVKGSVAVLIKDEEGKEM K S T V K G 1 0 0 0 0 1 2 1 1 2 2 2 0 0 0 1 2 0 2 1 0 0 18 1 2 1 2092.1205 P0ACJ8 P0ACJ8 28 45 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3 4.5892E-210 231.21 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 637860000 211550000 248010000 0 0 68278000 110020000 0 0 4146 213 4552 24756;24757;24758;24759;24760;24761;24762 18714;18715;18716;18717;18718 18716 5 211550000 253870000 0 0 82364000 121880000 0 0 STLINDTLFPIAQR VGLFTCITGVSGSGKSTLINDTLFPIAQRQ KSTLINDTLFPIAQRQLNGATIAEPAPYRD K S T Q R Q 1 1 1 1 0 1 0 0 0 2 2 0 0 1 1 1 2 0 0 0 0 0 14 0 0 2 1587.8621 P0A698 P0A698 647 660 uvrA UvrABC system protein A yes yes 2 0.0010396 45.973 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4147 66 4553 24763;24764 18719;18720 18720 2 0 0 0 0 0 0 0 0 STLNLPETGFPMR ______________________________ YKSTLNLPETGFPMRGDLAKREPGMLARWT K S T M R G 0 1 1 0 0 0 1 1 0 0 2 0 1 1 2 1 2 0 0 0 0 0 13 0 1 2 1461.7286 P00956 P00956 6 18 ileS Isoleucine--tRNA ligase yes yes 2 4.879E-07 82.417 By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 26202000 7581500 5654900 0 0 6826600 6138600 0 0 4148 32 4554 24765;24766;24767;24768;24769;24770 18721;18722;18723 18723 3 7581500 5788400 0 0 8234900 24498000 0 0 STMQELNSR GAGGGDGGILTANEKSTMQELNSRLASYLD LTANEKSTMQELNSRLASYLDKVQALEEAN K S T S R L 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 9 0 1 0 1064.4921 CON__P35527 CON__P35527 155 163 yes yes 2 1.4587E-47 166.3 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 666500000 95572000 141740000 0 0 241640000 187550000 0 0 + 4149 15 4555;4556 24771;24772;24773;24774;24775;24776;24777;24778;24779;24780;24781;24782;24783 18724;18725;18726;18727;18728;18729;18730;18731;18732;18733;18734;18735;18736 18734 26 13 95572000 145080000 0 0 291490000 207770000 0 0 STPFAAQVAAER GWATAGGSGFRGSRKSTPFAAQVAAERCAD SRKSTPFAAQVAAERCADAVKEYGIKNLEV K S T E R C 4 1 0 0 0 1 1 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 12 0 1 5 1246.6306 P0A7R9 P0A7R9 58 69 rpsK 30S ribosomal protein S11 yes yes 2 1.0899E-09 112.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1078900000 274340000 268970000 0 0 255110000 280460000 0 0 4150 121 4557 24784;24785;24786;24787 18737;18738;18739;18740 18738 4 274340000 275320000 0 0 307740000 310680000 0 0 STPYCTDIGK NNQVGFTTSNPLDARSTPYCTDIGKMVQAP PLDARSTPYCTDIGKMVQAPIFHVNADDPE R S T G K M 0 0 0 1 1 0 0 1 0 1 0 1 0 0 1 1 2 0 1 0 0 0 10 0 0 1 1140.5121 P0AFG3 P0AFG3 404 413 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0032191 60.828 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 155960000 47010000 52927000 0 0 27412000 28608000 0 0 4151 246 4558 24788;24789;24790;24791 18741;18742;18743;18744 18741 3 47010000 54176000 0 0 33067000 31692000 0 0 STSEVYGMCSDKYFDEDHSNLIVGP IIRYCVKYRKRIIFPSTSEVYGMCSDKYFD DKYFDEDHSNLIVGPVNKPRWIYSVSKQLL P S T G P V 0 0 1 3 1 0 2 2 1 1 1 1 1 1 1 4 1 0 2 2 0 0 25 1 2 0 2849.216 P77398 P77398 431 455 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 6.9211E-42 109.85 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 680900000 9666900 13273000 0 0 427400000 230570000 0 0 4152 432 4559;4560 24792;24793;24794;24795;24796;24797;24798;24799 18745;18746;18747;18748 18745 332 4 58355000 79441000 0 0 608480000 328670000 0 0 STSQTFIYK RYTASGCEVIAVNTRSTSQTFIYKCDAVLC IAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ R S T Y K C 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 2 2 0 1 0 0 0 9 0 0 0 1073.5393 LSD1-FL-His LSD1-FL-His 611 619 yes yes 2 5.0198E-14 133.6 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 42042000000 12060000000 10005000000 0 0 10680000000 9296900000 0 0 4153 24 4561 24800;24801;24802;24803;24804;24805;24806;24807;24808 18749;18750;18751;18752;18753 18752 5 12060000000 10241000000 0 0 12895000000 10299000000 0 0 STSSFSCLSR GFSSGSAVVSGGSRRSTSSFSCLSRHGGGG GGSRRSTSSFSCLSRHGGGGGGFGGGGFGS R S T S R H 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 0 10 0 0 0 1130.5026 CON__P35908v2;CON__P35908 CON__P35908v2 36 45 yes no 2 0.00042617 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14497000 0 3532000 0 0 5652100 5313200 0 0 + 4154 16 4562 24809;24810;24811;24812 18754;18755;18756;18757 18756 4 0 3615300 0 0 6818200 5885800 0 0 STTNHDHHIYVLMGVSGSGK ______________________________ DHHIYVLMGVSGSGKSAVASEVAHQLHAAF M S T G K S 0 0 1 1 0 0 0 3 3 1 1 1 1 0 0 3 2 0 1 2 0 0 20 0 0 0 2139.0167 P46859 P46859 2 21 gntK Thermoresistant gluconokinase yes yes 3;4 1.3807E-18 92.932 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 101970000 26073000 31887000 0 0 15859000 28147000 0 0 4155 372 4563 24813;24814;24815;24816;24817;24818;24819;24820 18758;18759;18760;18761;18762;18763;18764;18765 18763 8 26073000 32639000 0 0 19131000 31181000 0 0 STVAGALEEALHK RGVVLWFTGLSGSGKSTVAGALEEALHKLG GKSTVAGALEEALHKLGVSTYLLDGDNVRH K S T H K L 3 0 0 0 0 0 2 1 1 0 2 1 0 0 0 1 1 0 0 1 0 0 13 0 2 3 1324.6987 P0A6J1 P0A6J1 42 54 cysC Adenylyl-sulfate kinase yes yes 2;3 3.579E-70 207.34 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 427900000 149110000 97755000 0 0 90678000 90359000 0 0 4156 73 4564 24821;24822;24823;24824;24825;24826;24827;24828 18766;18767;18768;18769;18770;18771;18772;18773 18766 8 149110000 100060000 0 0 109390000 100100000 0 0 SVAAVGHDAK PSVVAIRQDRAGSPKSVAAVGHDAKQMLGR AGSPKSVAAVGHDAKQMLGRTPGNIAAIRP K S V A K Q 3 0 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 2 0 0 10 0 0 3 953.49304 P0A9X4 P0A9X4 51 60 mreB Rod shape-determining protein MreB yes yes 2 0.011183 48.283 By MS/MS By MS/MS By matching 1 1 1 10503000 5339900 4924700 0 0 0 238620 0 0 4157 180 4565 24829;24830;24831 18774 18774 1 5339900 5041000 0 0 0 264340 0 0 SVADATVATWHKKPGDAVVRDE ______________________________ ATWHKKPGDAVVRDEVLVEIETDKVVLEVP E S V D E V 4 1 0 3 0 0 1 1 1 0 0 2 0 0 1 1 2 1 0 4 0 0 22 3 0 5 2351.187 P0AFG6 P0AFG6 14 35 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex yes yes 3;4 1.8832E-08 62.684 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 2 1 1 1 34610000 7765600 3203700 14076000 5766600 0 1157400 2640700 0 4158 247 4566 24832;24833;24834;24835;24836;24837;24838;24839 18775;18776 18775 2 119320000 48856000 119600000 43720000 0 17541000 20323000 0 SVAELVEGVSK DTPATYQDMEQLFGKSVAELVEGVSKLDKL LFGKSVAELVEGVSKLDKLKFRDKKEAQAE K S V S K L 1 0 0 0 0 0 2 1 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 0 2 1 1116.6027 P0AG24 P0AG24 92 102 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT;GTP pyrophosphokinase;Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase yes yes 2 0.0012687 67.334 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24979000 7515200 4673500 0 0 5545500 7245300 0 0 4159 254 4567 24840;24841;24842;24843 18777;18778;18779;18780 18777 4 7515200 4783800 0 0 6689600 8026200 0 0 SVAIALR SELDKHIIGQDNAKRSVAIALRNRWRRMQL IGQDNAKRSVAIALRNRWRRMQLNEELRHE R S V L R N 2 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 7 0 0 2 728.45447 P0A6H5 P0A6H5 26 32 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 0.0071602 59.609 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 35441000 11646000 9628900 0 0 6697700 7468700 0 0 4160 71 4568 24844;24845;24846;24847 18781;18782;18783 18782 2 11646000 9856100 0 0 8079400 8273600 0 0 SVARGTSVRMGTLDPLGTNIKLGKTSYSE TCVFAEPQFRPAVVESVARGTSVRMGTLDP PLGTNIKLGKTSYSEFLSQLANQYASCLKG E S V S E F 1 2 1 1 0 0 1 4 0 1 3 2 1 0 1 4 4 0 1 2 0 0 29 4 0 2 3037.5866 P39172 P39172 266 294 znuA High-affinity zinc uptake system protein ZnuA yes yes 4;5 9.343E-15 79.395 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 1 2 4 161380000 1174400 1100700 12686000 5790100 8820300 7478000 12847000 111480000 4161 361 4569;4570 24848;24849;24850;24851;24852;24853;24854;24855;24856;24857;24858;24859;24860;24861 18784;18785;18786;18787;18788;18789;18790 18789 293 6 18044000 16786000 107790000 43898000 135800000 113340000 98876000 639760000 SVDEAANSDIVDK VAILAVAGAEKIIERSVDEAANSDIVDKLV ERSVDEAANSDIVDKLVAEL__________ R S V D K L 2 0 1 3 0 0 1 0 0 1 0 1 0 0 0 2 0 0 0 2 0 0 13 0 1 2 1361.6311 P0ABA0 P0ABA0 139 151 atpF ATP synthase subunit b yes yes 2 3.014E-07 88.441 By matching By matching By MS/MS By MS/MS 1 1 1 1 10093000 2083900 1526800 0 0 2812600 3669400 0 0 4162 192 4571 24862;24863;24864;24865 18791;18792 18792 2 2083900 1562800 0 0 3392800 4064900 0 0 SVDGIQVGEGR EVFMSGTAAEITPVRSVDGIQVGEGRCGPV TPVRSVDGIQVGEGRCGPVTKRIQQAFFGL R S V G R C 0 1 0 1 0 1 1 3 0 1 0 0 0 0 0 1 0 0 0 2 0 0 11 0 1 0 1115.5571 P0AB80 P0AB80 267 277 ilvE Branched-chain-amino-acid aminotransferase yes yes 2 2.3641E-11 119.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30253000 8401000 8797900 0 0 6495100 6559100 0 0 4163 191 4572 24866;24867;24868;24869 18793;18794;18795;18796 18794 4 8401000 9005500 0 0 7835100 7266000 0 0 SVEEILGK ENMNSPEMVAAKRGKSVEEILGK_______ VAAKRGKSVEEILGK_______________ K S V G K - 0 0 0 0 0 0 2 1 0 1 1 1 0 0 0 1 0 0 0 1 0 0 8 0 2 0 873.48075 P0A7W1 P0A7W1 160 167 rpsE 30S ribosomal protein S5 yes yes 2 0.0018997 89.296 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 91914000 24657000 19882000 0 0 23446000 23928000 0 0 4164 131 4573 24870;24871;24872;24873;24874 18797;18798;18799;18800;18801 18798 5 36965000 20351000 0 0 28283000 26507000 0 0 SVEIDRKILA NGISYSKFINGLKKASVEIDRKILADIAVF GLKKASVEIDRKILADIAVFDKVAFTALVE A S V L A D 1 1 0 1 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 1 0 0 10 2 1 0 1142.6659 P0A7L3 P0A7L3 87 96 rplT 50S ribosomal protein L20 yes yes 2;3 0.0036586 72.485 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 1 2 2 75071000 7512800 7291700 0 0 26727000 31751000 1789300 0 4165 111 4574 24875;24876;24877;24878;24879;24880;24881;24882;24883 18802;18803;18804;18805 18802 3 45352000 43641000 0 0 38050000 45261000 13771000 0 SVFELTQQHHHDHLICLDCGK DDAGIVTRHNFEGGKSVFELTQQHHHDHLI QQHHHDHLICLDCGKVIEFSDDSIEARQRE K S V G K V 0 0 0 2 2 2 1 1 4 1 3 1 0 1 0 1 1 0 0 1 0 0 21 0 1 0 2573.1904 P0A9A9 P0A9A9 78 98 fur Ferric uptake regulation protein yes yes 3;4 3.6181E-20 94.358 By MS/MS By MS/MS By MS/MS 1 1 2 63203000 16243000 16442000 0 0 0 30518000 0 0 4166 162 4575 24884;24885;24886;24887 18806;18807;18808;18809 18806 3 16243000 16830000 0 0 0 33807000 0 0 SVGVMGDGR YDKVSQAFTVFLPVRSVGVMGDGRKYDWVV VFLPVRSVGVMGDGRKYDWVVSLRAVETID R S V G R K 0 1 0 1 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 2 0 0 9 0 0 0 876.41235 P04079 P04079 456 464 guaA GMP synthase [glutamine-hydrolyzing] yes yes 2 0.017976 45.68 By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 13285000 3649700 3569600 0 0 2847300 2132800 1085400 0 4167 44 4576 24888;24889;24890;24891;24892 18810 18810 1 3649700 3653900 0 0 3434700 2362700 8353600 0 SVIARTRKE RTEDEMGLRVAETPESVIARTRKENDLGVG VAETPESVIARTRKENDLGVGYYQP_____ E S V K E N 1 2 0 0 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 9 3 0 1 1058.6196 P0AEI1 P0AEI1 456 464 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 3 0.0096091 47.198 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 90625000 6594300 5917500 15661000 15660000 2245800 1827900 19580000 23139000 4168 237 4577 24893;24894;24895;24896;24897;24898;24899;24900 18811;18812;18813;18814;18815;18816;18817 18812 5 101320000 90243000 133070000 118730000 34576000 27705000 150690000 132790000 SVIDGQSKPLLIYGKPE DLPSMEDVEKVVIDESVIDGQSKPLLIYGK IDGQSKPLLIYGKPEAQQASGE________ E S V P E A 0 0 0 1 0 1 1 2 0 2 2 2 0 0 2 2 0 0 1 1 0 0 17 2 0 2 1843.0091 P0A6H1 P0A6H1 401 417 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 3 0.0052185 33.947 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 70454000 0 0 13264000 17494000 6426900 0 15470000 17798000 4169 70 4578 24901;24902;24903;24904;24905 18818 18818 1 0 0 112710000 132640000 98948000 0 119060000 102140000 SVIGRIHSFE ______________________________ ______________________________ M S V F E S 0 1 0 0 0 0 1 1 1 2 0 0 0 1 0 2 0 0 0 1 0 0 10 1 0 0 1143.6037 P0A9N4 P0A9N4 2 11 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2;3 3.2028E-06 87.308 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 4 2 2 137460000 8100600 15626000 23805000 21029000 19098000 13558000 15625000 20615000 4170 171 4579 24906;24907;24908;24909;24910;24911;24912;24913;24914;24915;24916;24917;24918;24919;24920;24921;24922;24923;24924 18819;18820;18821;18822;18823;18824 18819 5 124460000 238300000 202270000 159430000 72611000 102090000 120250000 118310000 SVLHNMVRA RRTPDDSFLEWHKPASVLHNMVRAVADPWP EWHKPASVLHNMVRAVADPWPGAFSYVGNQ A S V R A V 1 1 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 2 0 0 9 1 0 0 1025.544 P77398 P77398 215 223 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 3.6323E-05 107.29 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 59683000 1971200 699530 0 0 33944000 23069000 0 0 4171 432 4580 24925;24926;24927;24928;24929;24930;24931;24932;24933 18825;18826;18827 18827 3 18974000 10668000 0 0 47928000 32884000 0 0 SVLHNMVRAVA RRTPDDSFLEWHKPASVLHNMVRAVADPWP HKPASVLHNMVRAVADPWPGAFSYVGNQKF A S V V A D 2 1 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 3 0 0 11 1 0 1 1195.6496 P77398 P77398 215 225 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.01827 61.56 By MS/MS By MS/MS By MS/MS 1 1 1 14426000 467800 0 0 0 9679800 4278900 0 0 4172 432 4581 24934;24935;24936 18828;18829 18829 2 2823900 0 0 0 13781000 6099500 0 0 SVMRYWFEEP EREDLRYVHQLDNNASVMRYWFEEPYEAFV LDNNASVMRYWFEEPYEAFVELSDLYDKHI A S V E P Y 0 1 0 0 0 0 2 0 0 0 0 0 1 1 1 1 0 1 1 1 0 0 10 1 2 0 1342.6016 P0A951 P0A951 28 37 speG Spermidine N(1)-acetyltransferase yes yes 2 0.021521 49.813 By MS/MS By MS/MS 1 1 2877000 0 0 0 0 1186200 1690800 0 0 4173 160 4582 24937;24938 18830 18830 1 0 0 0 0 1688700 2410200 0 0 SVMTFGISHHTDETGSDAWREDGLVAR HLAREIERIANAGIRSVMTFGISHHTDETG ETGSDAWREDGLVARMSRICKQTVPEMIVM R S V A R M 2 2 0 3 0 0 2 3 2 1 1 0 1 1 0 3 3 1 0 2 0 0 27 1 2 2 2973.3675 P0ACB2 P0ACB2 75 101 hemB Delta-aminolevulinic acid dehydratase yes yes 4 1.0462E-33 103.9 By matching By matching By MS/MS By MS/MS 1 1 1 1 43439000 11147000 10943000 0 0 10082000 11266000 0 0 4174 207 4583 24939;24940;24941;24942 18831;18832 18831 2 11147000 11201000 0 0 12162000 12480000 0 0 SVNIFDK FIFLEEGDIAEITRRSVNIFDKTGAEVKRQ DIAEITRRSVNIFDKTGAEVKRQDIESNLQ R S V D K T 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 7 0 0 0 821.42832 P17169 P17169 219 225 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 8.5673E-05 113.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4604200000 998480000 1030600000 0 0 1196800000 1378400000 0 0 4175 288 4584 24943;24944;24945;24946 18833;18834;18835;18836;18837 18835 5 998480000 1054900000 0 0 1443700000 1527000000 0 0 SVNIFDKTGAEVK FIFLEEGDIAEITRRSVNIFDKTGAEVKRQ RRSVNIFDKTGAEVKRQDIESNLQYDAGDK R S V V K R 1 0 1 1 0 0 1 1 0 1 0 2 0 1 0 1 1 0 0 2 0 0 13 1 1 1 1406.7405 P17169 P17169 219 231 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 9.2967E-37 171.32 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 481990000 188160000 170510000 0 0 52336000 70976000 0 0 4176 288 4585 24947;24948;24949;24950;24951;24952;24953;24954 18838;18839;18840;18841;18842 18838 5 188160000 174540000 0 0 63134000 78626000 0 0 SVNMEPK CHSLYLPESESMTRRSVNMEPKLRPAFPPK ESESMTRRSVNMEPKLRPAFPPKIRTY___ R S V P K L 0 0 1 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 7 0 1 1 803.38474 P0AC41 P0AC41 570 576 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.011019 54.611 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 50208000 18370000 16244000 0 0 8185600 7408400 0 0 4177 203 4586 24955;24956;24957;24958;24959 18843;18844 18844 2 18370000 16627000 0 0 9874300 8272500 0 0 SVPLVEGVDFFNELER PIHIYGAVIAGAQVRSVPLVEGVDFFNELE VPLVEGVDFFNELERAIRESYPKPKMMILG R S V E R A 0 1 1 1 0 0 3 1 0 0 2 0 0 2 1 1 0 0 0 3 0 0 16 0 3 1 1848.9258 P77434 P77434 148 163 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 3.3498E-68 163.99 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 320380000 75740000 57709000 0 0 69444000 117480000 0 0 4178 433 4587 24960;24961;24962;24963;24964;24965 18845;18846;18847;18848 18845 4 90046000 72463000 0 0 83771000 130140000 0 0 SVPVKDTEVVER YSYQFGLFDKAGDWKSVPVKDTEVVERLEH DWKSVPVKDTEVVERLEHTLREFHEKLREL K S V E R L 0 1 0 1 0 0 2 0 0 0 0 1 0 0 1 1 1 0 0 4 0 0 12 1 2 1 1356.7249 P24251 P24251 84 95 crl Sigma factor-binding protein Crl yes yes 2;3 4.7709E-06 72.006 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 62647000 13953000 20655000 0 0 14677000 13362000 0 0 4179 312 4588 24966;24967;24968;24969;24970;24971;24972;24973 18849;18850;18851;18852;18853;18854;18855 18853 7 13953000 21143000 0 0 17705000 14802000 0 0 SVQIEVR TRSTLNIPGTGGKSKSVQIEVRKKRTFVKR PGTGGKSKSVQIEVRKKRTFVKRDPQEAER K S V V R K 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 7 0 1 0 829.46577 P0A705 P0A705 80 86 infB Translation initiation factor IF-2 yes yes 2 4.282E-05 97.068 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22018000 0 6862500 0 0 7214200 7941100 0 0 4180 90 4589 24974;24975;24976;24977 18856;18857;18858;18859 18856 4 0 7024500 0 0 8702600 8796900 0 0 SVSRIVIERPA DFKVRQYLTKELAKASVSRIVIERPAKSIR LAKASVSRIVIERPAKSIRVTIHTARPGIV A S V P A K 1 2 0 0 0 0 1 0 0 2 0 0 0 0 1 2 0 0 0 2 0 0 11 2 1 1 1225.7143 P0A7V3 P0A7V3 51 61 rpsC 30S ribosomal protein S3 yes yes 3 0.000103 71.241 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 37256000 8273600 8834700 0 0 12819000 7329100 0 0 4181 129 4590 24978;24979;24980;24981;24982;24983;24984;24985 18860;18861 18861 2 14784000 15103000 0 0 17726000 9886200 0 0 SVTNPQRPPVIWIGAQE ATMGLSSKAAAEMAESVTNPQRPPVIWIGA TNPQRPPVIWIGAQECTGCTESLLRATHPT E S V Q E C 1 1 1 0 0 2 1 1 0 2 0 0 0 0 3 1 1 1 0 2 0 0 17 1 0 4 1890.9952 P69741 P69741 42 58 hybO Hydrogenase-2 small chain yes yes 2 1.5902E-05 62.162 By MS/MS By MS/MS By MS/MS 1 1 1 4028800 569970 720410 0 2738500 0 0 0 0 4182 403 4591 24986;24987;24988 18862 18862 1 8757400 10986000 0 20762000 0 0 0 0 SVVANTVKGGDGNYGYNAA EAPLRQIVLNCGEEPSVVANTVKGGDGNYG NTVKGGDGNYGYNAATEEYGNMIDMGILDP P S V A A T 3 0 3 1 0 0 0 4 0 0 0 1 0 0 0 1 1 0 2 3 0 0 19 1 0 2 1855.8701 P0A6F5 P0A6F5 463 481 groL 60 kDa chaperonin yes yes 2 1.7381E-66 170.74 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 222270000 15343000 13875000 0 0 149180000 43875000 0 0 4183 68 4592 24989;24990;24991;24992 18863;18864 18863 2 92618000 83042000 0 0 212380000 62544000 0 0 SVVNDTDGIVR ______________________________ ______________________________ K S V V R V 0 1 1 2 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 3 0 0 11 0 0 0 1173.599 P0A9S3 P0A9S3 3 13 gatD Galactitol-1-phosphate 5-dehydrogenase yes yes 2 0.0024492 61.78 By MS/MS By MS/MS By MS/MS By MS/MS 1 3 2 2 41356000 10655000 12241000 0 0 7201500 11258000 0 0 4184 175 4593 24993;24994;24995;24996;24997;24998;24999;25000 18865;18866;18867 18865 3 10655000 25639000 0 0 20479000 27507000 0 0 SVYIAEQLADYFR SYLTVAIGCTGGKHRSVYIAEQLADYFRSR HRSVYIAEQLADYFRSRGKNVQSRHRTLEK R S V F R S 2 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 0 0 2 1 0 0 13 0 1 2 1573.7777 P0A894 P0A894 254 266 rapZ RNase adapter protein RapZ yes yes 2 2.8131E-29 120.06 By matching By matching By matching By MS/MS 1 1 1 1 35321000 7861500 5273100 0 0 9625500 12561000 0 0 4185 141 4594 25001;25002;25003;25004 18868 18868 0 7861500 5397600 0 0 11611000 13915000 0 0 SYHLTRE QGVLFDTHIQPNGEESYHLTREGGHSHRRI HIQPNGEESYHLTREGGHSHRRILHAADAT E S Y R E G 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 0 1 0 0 0 7 1 0 0 904.44028 P10902 P10902 115 121 nadB L-aspartate oxidase yes yes 2 0.0056936 75.109 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 141370000 17427000 20486000 17617000 15371000 10159000 12283000 21330000 26692000 4186 274 4595 25005;25006;25007;25008;25009;25010;25011;25012 18869 18869 0 267770000 312420000 149690000 116540000 156410000 186160000 164160000 153180000 SYKVSILDE VSWHEARETFANRGESYKVSILDENIAHDD FANRGESYKVSILDENIAHDDKPGLYFHEE E S Y D E N 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 2 0 0 1 1 0 0 9 1 0 0 1052.539 P0A8M3 P0A8M3 154 162 thrS Threonine--tRNA ligase yes yes 2 0.0016006 85.212 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 57103000 4969500 5303700 5630600 7016000 5041600 10984000 7688400 10468000 4187 147 4596 25013;25014;25015;25016;25017;25018;25019;25020;25021;25022;25023;25024 18870;18871;18872;18873 18870 4 71553000 74794000 47842000 53192000 54481000 41201000 59172000 60077000 SYNMAGWR PGARDVAVEFFTLSKSYNMAGWRIGFMVGN EFFTLSKSYNMAGWRIGFMVGNKTLVSALA K S Y W R I 1 1 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 0 0 8 0 0 1 983.42834 P77434 P77434 245 252 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 6.2679E-12 114.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26227000 11596000 0 0 0 6376700 8254500 0 0 4188 433 4597 25025;25026;25027;25028 18874;18875;18876;18877 18875 4 11596000 0 0 0 7692200 9144100 0 0 SYNPTTTGHK ANKLPYVWPESVSMRSYNPTTTGHKGQIKR SVSMRSYNPTTTGHKGQIKRALQTLVAAKK R S Y H K G 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 3 0 1 0 0 0 10 0 0 1 1104.52 P00893 P00893 184 193 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2;3 1.5831E-07 94.85 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 113520000 45697000 42702000 0 0 15215000 9903200 0 0 4189 29 4598 25029;25030;25031;25032;25033;25034;25035;25036 18878;18879;18880;18881;18882 18879 2 45697000 43710000 0 0 18354000 10971000 0 0 SYQERVE WPRETPPGPKRGGFESYQERVEGNKVRERS GPKRGGFESYQERVEGNKVRERSPSFGEYY E S Y V E G 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 7 1 1 0 909.41921 P21179 P21179 484 490 katE Catalase HPII yes yes 2 0.011936 69.998 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 1 71683000 11991000 13563000 7260600 0 2837200 23556000 0 12475000 4190 293 4599 25037;25038;25039;25040;25041;25042;25043;25044;25045 18883;18884;18885 18883 3 102120000 109210000 61692000 0 43681000 69934000 0 71590000 SYQMNPMNR PFREAAGSALKGDRKSYQMNPMNRREAIRE LKGDRKSYQMNPMNRREAIRESLLDEAQGA K S Y N R R 0 1 2 0 0 1 0 0 0 0 0 0 2 0 1 1 0 0 1 0 0 0 9 0 0 1 1139.4852 P0ACB2 P0ACB2 218 226 hemB Delta-aminolevulinic acid dehydratase yes yes 2 1.5348E-06 92.187 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13530000 6716100 6814300 0 0 0 0 0 0 4191 207 4600 25046;25047;25048;25049 18886;18887;18888 18887 3 6716100 6975100 0 0 0 0 0 0 SYQVLAR ______________________________ ______________________________ M S Y A R K 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 7 0 0 1 835.4552 P06710 P06710 2 8 dnaX DNA polymerase III subunit tau yes yes 2 0.0048601 62.714 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 48201000 16488000 14983000 0 0 8501100 8228600 0 0 4192 51 4601 25050;25051;25052;25053 18889;18890;18891 18890 3 16488000 15337000 0 0 10255000 9115500 0 0 TAAEGVGEAELASDAAYLK VVAEYCDEQGGFIIRTAAEGVGEAELASDA GVGEAELASDAAYLKRVWTKVMERKKRPQT R T A L K R 6 0 0 1 0 0 3 2 0 0 2 1 0 0 0 1 1 0 1 1 0 0 19 0 3 6 1864.9054 P0A9J0 P0A9J0 172 190 rng Ribonuclease G yes yes 2 0.0022012 41.621 By MS/MS By MS/MS 1 1 12317000 8135900 0 0 0 0 4180700 0 0 4193 165 4602 25054;25055 18892 18892 1 8135900 0 0 0 0 4631300 0 0 TAAEGVGEAELASDAAYLKR VVAEYCDEQGGFIIRTAAEGVGEAELASDA VGEAELASDAAYLKRVWTKVMERKKRPQTR R T A K R V 6 1 0 1 0 0 3 2 0 0 2 1 0 0 0 1 1 0 1 1 0 0 20 1 3 6 2021.0065 P0A9J0 P0A9J0 172 191 rng Ribonuclease G yes yes 3 6.9435E-06 60.564 By MS/MS 1 8391900 0 8391900 0 0 0 0 0 0 4194 165 4603 25056 18893 18893 1 0 8590000 0 0 0 0 0 0 TAAENDFVTLK VEDYKKKYEDEINKRTAAENDFVTLKKDVD INKRTAAENDFVTLKKDVDNAYMIKVELQS R T A L K K 2 0 1 1 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 1 0 0 11 0 1 2 1207.6085 CON__P35908v2;CON__P35908 CON__P35908v2 276 286 yes no 2 2.3345E-24 163.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 341870000 40138000 42932000 0 0 107540000 151260000 0 0 + 4195 16 4604 25057;25058;25059;25060 18894;18895;18896;18897 18896 4 40138000 43946000 0 0 129720000 167560000 0 0 TAAENDFVTLKK VEDYKKKYEDEINKRTAAENDFVTLKKDVD NKRTAAENDFVTLKKDVDNAYMIKVELQSK R T A K K D 2 0 1 1 0 0 1 0 0 0 1 2 0 1 0 0 2 0 0 1 0 0 12 1 1 2 1335.7034 CON__P35908v2;CON__P35908 CON__P35908v2 276 287 yes no 2;3 3.0769E-35 160.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 687360000 100140000 97642000 0 0 265050000 224530000 0 0 + 4196 16 4605 25061;25062;25063;25064;25065;25066;25067;25068;25069 18898;18899;18900;18901;18902;18903;18904;18905;18906 18905 6 100140000 99947000 0 0 319730000 248730000 0 0 TAAENEFVTLKK VEDLKNKYEDEINKRTAAENEFVTLKKDVD NKRTAAENEFVTLKKDVDAAYMNKVELQAK R T A K K D 2 0 1 0 0 0 2 0 0 0 1 2 0 1 0 0 2 0 0 1 0 0 12 1 2 2 1349.7191 CON__P48668;CON__P04259;CON__P02538 CON__P48668 261 272 no no 3 0.0062646 34.386 By matching By MS/MS By MS/MS 1 1 1 15673000 4314200 5820100 0 0 0 5538900 0 0 + 4197 5 4606 25070;25071;25072 18907;18908 18907 2 4314200 5957400 0 0 0 6135900 0 0 TAAKYKSEEPDAE IEMYQRGELQQLIKETAAKYKSEEPDAE__ KETAAKYKSEEPDAE_______________ E T A A E - 3 0 0 1 0 0 3 0 0 0 0 2 0 0 1 1 1 0 1 0 0 0 13 2 2 4 1437.6624 P0AC69 P0AC69 103 115 grxD Glutaredoxin-4 yes yes 2;3 0.0048243 57.348 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 107130000 10488000 9105300 15545000 15985000 4541200 7380800 21256000 22826000 4198 206 4607 25073;25074;25075;25076;25077;25078;25079;25080;25081;25082;25083;25084;25085;25086;25087;25088 18909;18910;18911;18912 18909 4 161150000 138860000 132090000 121190000 69917000 111870000 163590000 131000000 TACEVAEISYK LFEEGQERSAWVRAKTACEVAEISYKKFRQ VRAKTACEVAEISYKKFRQLIQVNPDILMR K T A Y K K 2 0 0 0 1 0 2 0 0 1 0 1 0 0 0 1 1 0 1 1 0 0 11 0 2 2 1269.5911 P0ACJ8 P0ACJ8 91 101 crp cAMP-activated global transcriptional regulator CRP yes yes 2 3.1451E-23 135.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2386400000 539720000 598930000 0 0 647870000 599860000 0 0 4199 213 4608 25089;25090;25091;25092 18913;18914;18915 18915 3 539720000 613070000 0 0 781520000 664510000 0 0 TACEVAEISYKK LFEEGQERSAWVRAKTACEVAEISYKKFRQ RAKTACEVAEISYKKFRQLIQVNPDILMRL K T A K K F 2 0 0 0 1 0 2 0 0 1 0 2 0 0 0 1 1 0 1 1 0 0 12 1 2 2 1397.6861 P0ACJ8 P0ACJ8 91 102 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3 4.7602E-70 205.18 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 760920000 349830000 228030000 0 0 103110000 79948000 0 0 4200 213 4609 25093;25094;25095;25096;25097;25098;25099;25100 18916;18917;18918;18919;18920;18921;18922;18923 18916 8 349830000 233410000 0 0 124380000 88565000 0 0 TADTLAGLRLSKE VRRNSLMITLSQSGETADTLAGLRLSKELG GETADTLAGLRLSKELGYLGSLAICNVPGS E T A K E L 2 1 0 1 0 0 1 1 0 0 3 1 0 0 0 1 2 0 0 0 0 0 13 2 0 2 1373.7514 P17169 P17169 353 365 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 1.2955E-05 83.862 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 2 424360000 36424000 40027000 0 19367000 35759000 26650000 130260000 135870000 4201 288 4610 25101;25102;25103;25104;25105;25106;25107;25108;25109;25110;25111;25112;25113 18924;18925;18926;18927;18928;18929;18930;18931;18932 18932 7 559650000 610420000 0 146830000 550540000 403930000 1002500000 779750000 TAEDYLGEPVTEAVITVPAYFNDAQR APPQISAEVLKKMKKTAEDYLGEPVTEAVI EAVITVPAYFNDAQRQATKDAGRIAGLEVK K T A Q R Q 4 1 1 2 0 1 3 1 0 1 1 0 0 1 2 0 3 0 2 3 0 0 26 0 3 6 2868.3818 P0A6Y8 P0A6Y8 126 151 dnaK Chaperone protein DnaK yes yes 3 5.9589E-97 169.19 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1062700000 188820000 196680000 0 0 276140000 401060000 0 0 4202 86 4611 25114;25115;25116;25117;25118 18933;18934;18935;18936;18937 18933 5 188820000 201320000 0 0 333110000 444290000 0 0 TAEGGAEHVQPITGDNIVNVLDDFR VVQDAALLESGAAIRTAEGGAEHVQPITGD PITGDNIVNVLDDFRQAGYTVVTTSSEQGK R T A F R Q 2 1 2 3 0 1 2 3 1 2 1 0 0 1 1 0 2 0 0 3 0 0 25 0 2 3 2666.2936 P0AGJ5 P0AGJ5 242 266 yfiF Uncharacterized tRNA/rRNA methyltransferase YfiF yes yes 3 1.0729E-09 57.945 By matching By matching By matching By MS/MS 1 1 1 1 47618000 11033000 15264000 0 0 10141000 11180000 0 0 4203 265 4612 25119;25120;25121;25122 18938 18938 1 11033000 15625000 0 0 12234000 12384000 0 0 TAEQQEAWQAYAEGR LASISSVSRLTLTSRTAEQQEAWQAYAEGR TAEQQEAWQAYAEGRDMNVTVKPAAHPVGT R T A G R D 4 1 0 0 0 3 3 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 15 0 3 4 1736.7754 P23367 P23367 114 128 mutL DNA mismatch repair protein MutL yes yes 2 1.1663E-40 152.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36056000 11657000 7765900 0 0 7418900 9213600 0 0 4204 302 4613 25123;25124;25125;25126 18939;18940;18941;18942;18943 18942 5 11657000 7949200 0 0 8949400 10207000 0 0 TAGAYWR HVPNMRFCHHFKLMKTAGAYWRGDSNNKML CHHFKLMKTAGAYWRGDSNNKMLQRIYGTA K T A W R G 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 7 0 0 2 823.39769 P0A8M3 P0A8M3 201 207 thrS Threonine--tRNA ligase yes yes 2 9.0018E-12 133.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38914000 10612000 9965900 0 0 9684400 8651500 0 0 4205 147 4614 25127;25128;25129;25130 18944;18945;18946;18947 18944 4 10612000 10201000 0 0 11682000 9583900 0 0 TAGFNAKTDALLE CDRFRGFYPVVIDVETAGFNAKTDALLEIA VETAGFNAKTDALLEIAAITLKMDEQGWLM E T A L E I 3 0 1 1 0 0 1 1 0 0 2 1 0 1 0 0 2 0 0 0 0 0 13 1 0 3 1349.6827 P30014 P30014 26 38 rnt Ribonuclease T yes yes 2 4.2761E-08 74.841 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 134220000 11426000 10969000 22201000 17873000 9266000 7086900 22174000 33220000 4206 330 4615 25131;25132;25133;25134;25135;25136;25137;25138 18948;18949;18950;18951;18952;18953 18953 5 175550000 167280000 188640000 135510000 142660000 107410000 170660000 190640000 TAGFTLPLLQHLITR EGRDLMASAQTGTGKTAGFTLPLLQHLITR TAGFTLPLLQHLITRQPHAKGRRPVRALIL K T A T R Q 1 1 0 0 0 1 0 1 1 1 4 0 0 1 1 0 3 0 0 0 0 0 15 0 0 2 1679.9723 P25888 P25888 52 66 rhlE ATP-dependent RNA helicase RhlE yes yes 2;3 4.1172E-40 158.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1202200000 196070000 290020000 0 0 252140000 463960000 0 0 4207 318 4616 25139;25140;25141;25142;25143;25144;25145;25146 18954;18955;18956;18957;18958;18959;18960;18961 18959 8 196070000 296860000 0 0 304160000 513970000 0 0 TAGNVGSLK ASPAQTTATPAAGAKTAGNVGSLKSAPSSH PAAGAKTAGNVGSLKSAPSSHYTLQLSSSS K T A L K S 1 0 1 0 0 0 0 2 0 0 1 1 0 0 0 1 1 0 0 1 0 0 9 0 0 1 845.46068 P11557 P11557 333 341 damX Cell division protein DamX yes yes 2 0.00069777 68.224 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 10510000 3283800 3423500 0 0 0 3802900 0 0 4208 277 4617 25147;25148;25149;25150;25151 18962;18963;18964;18965 18964 4 3283800 3504300 0 0 0 4533100 0 0 TAHYVNDNLDEGP PYHQAYERGVKIIGATAHYVNDNLDEGPII GATAHYVNDNLDEGPIIMQDVIHVDHTYTA A T A G P I 1 0 2 2 0 0 1 1 1 0 1 0 0 0 1 0 1 0 1 1 0 0 13 0 1 1 1443.6266 P37051 P37051 216 228 purU Formyltetrahydrofolate deformylase yes yes 2 1.1701E-24 129.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27313000 4319200 3522500 0 0 10961000 8509500 0 0 4209 354 4618 25152;25153;25154;25155 18966;18967;18968;18969 18969 4 26073000 21082000 0 0 15606000 12130000 0 0 TAIDHDNYLE ANTQQIMDYYDSSLETAIDHDNYLEFQQVL DSSLETAIDHDNYLEFQQVLSDIGEALEAR E T A L E F 1 0 1 2 0 0 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 0 1 1189.5251 P0AFX4 P0AFX4 113 122 rsd Regulator of sigma D yes yes 2 0.00012 95.815 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 532110000 33350000 41465000 82598000 74378000 23249000 23187000 112960000 140920000 4210 251 4619 25156;25157;25158;25159;25160;25161;25162;25163 18970;18971;18972;18973 18971 4 512410000 632350000 701820000 563900000 357940000 351440000 869340000 808740000 TAIESALTALETALKGEDK KQVEEAGDKLPADDKTAIESALTALETALK SALTALETALKGEDKAAIEAKMQELAQVSQ K T A D K A 4 0 0 1 0 0 3 1 0 1 3 2 0 0 0 1 3 0 0 0 0 0 19 1 3 4 1960.0365 P0A6Y8 P0A6Y8 563 581 dnaK Chaperone protein DnaK yes yes 3 9.3437E-44 125.73 By matching By matching By MS/MS By MS/MS 1 1 1 1 159630000 19312000 21607000 0 0 58725000 59987000 0 0 4211 86 4620 25164;25165;25166;25167 18974;18975 18974 2 19312000 22117000 0 0 70840000 66452000 0 0 TAIVEGLAQR TKNNPVLIGEPGVGKTAIVEGLAQRIINGE PGVGKTAIVEGLAQRIINGEVPEGLKGRRV K T A Q R I 2 1 0 0 0 1 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 10 0 1 2 1056.5928 P63284-2;P63284 P63284-2 65 74 clpB Chaperone protein ClpB yes no 2 0.0076339 51.066 By MS/MS By MS/MS By matching By matching 1 1 1 1 16468000 3925900 4550700 0 0 3046700 4945100 0 0 4212 393 4621 25168;25169;25170;25171 18976;18977 18977 1 3925900 4658100 0 0 3675200 5478100 0 0 TAKIVSEFGRDA ______________________________ TEATAKIVSEFGRDANDTGSTEVQVALLTA A T A D A N 2 1 0 1 0 0 1 1 0 1 0 1 0 1 0 1 1 0 0 1 0 0 12 2 1 1 1292.6725 P0ADZ4 P0ADZ4 8 19 rpsO 30S ribosomal protein S15 yes yes 2;3 1.0242E-24 160.67 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 482510000 62376000 79865000 0 0 172310000 167960000 0 0 4213 231 4622 25172;25173;25174;25175;25176;25177;25178;25179 18978;18979;18980;18981;18982;18983;18984;18985;18986 18982 9 376540000 477990000 0 0 245320000 239430000 0 0 TAKRTGAQVRGPIPLPTRKE FDHRLIDQATAEIVETAKRTGAQVRGPIPL GAQVRGPIPLPTRKERFTVLISPHVNKDAR E T A K E R 2 3 0 0 0 1 1 2 0 1 1 2 0 0 3 0 3 0 0 1 0 0 20 5 0 5 2175.26 P0A7R5 P0A7R5 28 47 rpsJ 30S ribosomal protein S10 yes yes 4;5 3.6183E-05 50.397 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 1183500000 39212000 36839000 186840000 211820000 19240000 20859000 329460000 339280000 4214 120 4623 25180;25181;25182;25183;25184;25185;25186;25187;25188;25189;25190;25191;25192;25193;25194;25195 18987;18988;18989;18990;18991;18992;18993;18994;18995;18996;18997;18998;18999;19000;19001 18998 15 602490000 561800000 1587500000 1605900000 296210000 316150000 2535600000 1947100000 TALAIDAIINQR RGQRELIIGDRQTGKTALAIDAIINQRDSG TGKTALAIDAIINQRDSGIKCIYVAIGQKA K T A Q R D 3 1 1 1 0 1 0 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 12 0 0 3 1297.7354 P0ABB0 P0ABB0 176 187 atpA ATP synthase subunit alpha yes yes 2 1.4095E-07 103.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18916000 2522200 3450500 0 0 5507400 7435700 0 0 4215 193 4624 25196;25197;25198;25199 19002;19003;19004;19005 19005 4 2522200 3532000 0 0 6643600 8237100 0 0 TALAQYR AAQTKIMKKLSGGIRTALAQYRELAAFSQF KKLSGGIRTALAQYRELAAFSQFASDLDDA R T A Y R E 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 7 0 0 2 821.43955 P0ABB0 P0ABB0 395 401 atpA ATP synthase subunit alpha yes yes 2 0.018766 48.174 By MS/MS By MS/MS 1 1 10442000 0 0 0 0 5177800 5264400 0 0 4216 193 4625 25200;25201 19006;19007 19006 2 0 0 0 0 6246000 5831800 0 0 TALEGHE LDYLHGHGSLISGLETALEGHEVGDKFDVA GSLISGLETALEGHEVGDKFDVAVGANDAY E T A H E V 1 0 0 0 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 1 1 755.34498 P0A9K9 P0A9K9 47 53 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 0.0015487 80.555 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 83844000 0 0 20876000 20793000 0 0 18838000 23337000 4217 169 4626 25202;25203;25204;25205 19008 19008 0 0 0 177380000 157640000 0 0 144980000 133930000 TALKGEDKAAIE ADDKTAIESALTALETALKGEDKAAIEAKM ALETALKGEDKAAIEAKMQELAQVSQKLME E T A I E A 3 0 0 1 0 0 2 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 12 2 1 3 1244.6612 P0A6Y8 P0A6Y8 574 585 dnaK Chaperone protein DnaK yes yes 2;3 2.5985E-18 128.97 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 1 2 2 1 1 2391300000 484920000 466960000 1743200 1533300 300290000 287880000 844160000 3836500 4218 86 4627 25206;25207;25208;25209;25210;25211;25212;25213;25214;25215;25216;25217;25218;25219 19009;19010;19011;19012;19013;19014;19015 19009 6 7291100000 6995900000 14812000 11625000 4623300000 4363300000 6496900000 22017000 TALLVHLLK KIHQWYYRADDLEHKTALLVHLLKQPEATR DDLEHKTALLVHLLKQPEATRSIVFVRKRE K T A L K Q 1 0 0 0 0 0 0 0 1 0 4 1 0 0 0 0 1 0 0 1 0 0 9 0 0 1 1006.6539 P21507 P21507 236 244 srmB ATP-dependent RNA helicase SrmB yes yes 2 0.0018085 54.157 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 11503000 0 3182600 0 0 3548400 4771900 0 0 4219 296 4628 25220;25221;25222;25223 19016;19017;19018 19016 3 0 3257700 0 0 4280500 5286200 0 0 TAMASGESQWITSPQAR FPYIQLKLGASLDGRTAMASGESQWITSPQ MASGESQWITSPQARRDVQLLRAQSHAILT R T A A R R 3 1 0 0 0 2 1 1 0 1 0 0 1 0 1 3 2 1 0 0 0 0 17 0 1 4 1819.8523 P25539 P25539 161 177 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 2.0162E-17 102.66 By MS/MS By MS/MS By matching By matching 1 1 1 1 22476000 5499100 6311600 0 0 4642000 6023800 0 0 4220 315 4629 25224;25225;25226;25227 19019;19020 19020 2 5499100 6460600 0 0 5599700 6673000 0 0 TANSGYLTR STHGARKGLADTALKTANSGYLTRRLVDVA ADTALKTANSGYLTRRLVDVAQDLVVTEDD K T A T R R 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 2 0 1 0 0 0 9 0 0 1 981.48796 P0A8T7 P0A8T7 790 798 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.408E-17 131.06 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17886000 5151100 0 0 0 6985200 5749400 0 0 4221 153 4630 25228;25229;25230;25231 19021;19022;19023;19024 19022 4 5151100 0 0 0 8426300 6369000 0 0 TARINLAYTKVTSPISGRIGKSNVTE QQANAAVTAAKAAVETARINLAYTKVTSPI TSPISGRIGKSNVTEGALVQNGQATALATV E T A T E G 2 2 2 0 0 0 1 2 0 3 1 2 0 0 1 3 4 0 1 2 0 0 26 4 0 3 2775.5243 P0AE06 P0AE06 166 191 acrA Multidrug efflux pump subunit AcrA yes yes 4 0.0017245 23.913 By MS/MS 1 3884100 0 0 0 0 3884100 0 0 0 4222 232 4631 25232 19025 19025 1 0 0 0 0 59799000 0 0 0 TAVAEYPTK DGAILTATQNGYGKRTAVAEYPTKSRATKG NGYGKRTAVAEYPTKSRATKGVISIKVTER R T A T K S 2 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 2 0 1 1 0 0 9 0 1 3 978.50221 P0AES4 P0AES4 756 764 gyrA DNA gyrase subunit A yes yes 2 0.00211 78.334 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11703000 3531500 2690300 0 0 2490800 2990800 0 0 4223 238 4632 25233;25234;25235;25236 19026;19027;19028 19026 3 3531500 2753800 0 0 3004600 3313200 0 0 TAVEAAIAR LQQTNDAATVADPRKTAVEAAIARAKARKL VADPRKTAVEAAIARAKARKLEQQQANAEP K T A A R A 4 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 9 0 1 4 900.50288 P77611 P77611 557 565 rsxC Electron transport complex subunit RsxC yes yes 2 0.0020867 74.415 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 1 2 2 1 397220000 166130000 61684000 0 10237000 55939000 68001000 35224000 0 4224 438 4633 25237;25238;25239;25240;25241;25242;25243;25244;25245;25246;25247;25248 19029;19030;19031;19032;19033 19033 5 168700000 63140000 0 77613000 67480000 75329000 271090000 0 TAVGQTIQIGSGITK VEFFAVNTDAQALRKTAVGQTIQIGSGITK TAVGQTIQIGSGITKGLGAGANPEVGRNAA K T A T K G 1 0 0 0 0 2 0 3 0 3 0 1 0 0 0 1 3 0 0 1 0 0 15 0 0 1 1472.8199 P0A9A6 P0A9A6 52 66 ftsZ Cell division protein FtsZ yes yes 2 3.1485E-14 136.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 38489000 11348000 8820500 0 0 5166500 13154000 0 0 4225 161 4634 25249;25250;25251;25252 19034;19035;19036;19037 19034 4 11348000 9028700 0 0 6232400 14572000 0 0 TAVLDIGCGEGYYTHAFA DAIVAQLRERLDDKATAVLDIGCGEGYYTH LDIGCGEGYYTHAFADALPEITTFGLDVSK A T A F A D 3 0 0 1 1 0 1 3 1 1 1 0 0 1 0 0 2 0 2 1 0 0 18 0 1 2 1943.8724 P36999 P36999 87 104 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 0.021995 32.062 By MS/MS By MS/MS 1 1 2763800 0 0 0 0 989030 1774800 0 0 4226 352 4635 25253;25254 19038 19038 1 0 0 0 0 1408100 2530000 0 0 TAYATAVSANFRTE NTQRVECLELDNLMETAYATAVSANFRTES ETAYATAVSANFRTESRGAHSRFDFPDRDD E T A T E S 4 1 1 0 0 0 1 0 0 0 0 0 0 1 0 1 3 0 1 1 0 0 14 1 0 4 1500.7209 P0AC41 P0AC41 522 535 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 6.5676E-60 167.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 162840000 34024000 21905000 8022600 10443000 22114000 19118000 15914000 31302000 4227 203 4636 25255;25256;25257;25258;25259;25260;25261;25262 19039;19040;19041;19042 19041 4 522770000 334060000 68167000 79172000 340470000 289750000 122480000 179640000 TCAFIDAEHALDPIYAR TLTLQVIAAAQREGKTCAFIDAEHALDPIY AFIDAEHALDPIYARKLGVDIDNLLCSQPD K T C A R K 4 1 0 2 1 0 1 0 1 2 1 0 0 1 1 0 1 0 1 0 0 0 17 0 1 5 1961.9305 P0A7G6 P0A7G6 90 106 recA Protein RecA yes yes 3 1.1086E-11 87.932 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29513000 5428600 8488400 0 0 8318900 7277000 0 0 4228 104 4637 25263;25264;25265;25266 19043;19044;19045;19046 19044 4 5428600 8688800 0 0 10035000 8061300 0 0 TDALLEIAAITLK YPVVIDVETAGFNAKTDALLEIAAITLKMD AKTDALLEIAAITLKMDEQGWLMPDTTLHF K T D L K M 3 0 0 1 0 0 1 0 0 2 3 1 0 0 0 0 2 0 0 0 0 0 13 0 1 3 1370.8021 P30014 P30014 33 45 rnt Ribonuclease T yes yes 2 0.00091359 63.283 By MS/MS By MS/MS By MS/MS 1 1 1 47391000 0 8544500 0 0 21141000 17706000 0 0 4229 330 4638 25267;25268;25269 19047 19047 1 0 8746200 0 0 25502000 19614000 0 0 TDGSSTLASFGER NEYNQKVQLTFNNLKTDGSSTLASFGERVG LKTDGSSTLASFGERVGNQKLSLEKMTISV K T D E R V 1 1 0 1 0 0 1 2 0 0 1 0 0 1 0 3 2 0 0 0 0 0 13 0 1 1 1326.6052 P77804 P77804 219 231 ydgA Protein YdgA yes yes 2 0.0061835 50.284 By MS/MS 1 7700700 0 0 0 0 0 7700700 0 0 4230 439 4639 25270 19048 19048 1 0 0 0 0 0 8530600 0 0 TDIDKIR AKALAEHGIVFGEPKTDIDKIRTWKEKVIN GIVFGEPKTDIDKIRTWKEKVINQLTGGLA K T D I R T 0 1 0 2 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 7 1 0 0 859.47633 P0A9P0 P0A9P0 81 87 lpdA Dihydrolipoyl dehydrogenase yes yes 2 2.9585E-05 97.071 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 38897000 9426800 13676000 0 2918600 7567700 5308000 0 0 4231 172 4640 25271;25272;25273;25274;25275 19049;19050;19051 19049 2 9426800 13999000 0 22127000 9128900 5880000 0 0 TDKFIVR WGVQTKGKKTRSNKRTDKFIVRRRSK____ KKTRSNKRTDKFIVRRRSK___________ R T D V R R 0 1 0 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 7 1 0 0 877.50215 P60422 P60422 263 269 rplB 50S ribosomal protein L2 yes yes 2 1.8334E-44 163.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 287310000 76321000 86341000 0 0 66169000 58476000 0 0 4232 379 4641 25276;25277;25278;25279 19052;19053;19054;19055 19053 4 76321000 88379000 0 0 79820000 64778000 0 0 TDKTIAFSLLDLAP ______________________________ MTDKTIAFSLLDLAPIPEGSSAREAFSHSL M T D A P I 2 0 0 2 0 0 0 0 0 1 3 1 0 1 1 1 2 0 0 0 0 0 14 1 0 2 1503.8185 P0ADV5 P0ADV5 2 15 yhbW Uncharacterized protein YhbW yes yes 2 5.2885E-57 162.38 By MS/MS 1 33948000 0 0 0 0 0 33948000 0 0 4233 226 4642 25280 19056 19056 1 0 0 0 0 0 48393000 0 0 TDKTIAFSLLDLAPIPE ______________________________ KTIAFSLLDLAPIPEGSSAREAFSHSLDLA M T D P E G 2 0 0 2 0 0 1 0 0 2 3 1 0 1 2 1 2 0 0 0 0 0 17 1 0 4 1842.9979 P0ADV5 P0ADV5 2 18 yhbW Uncharacterized protein YhbW yes yes 2 8.5955E-95 230.59 By MS/MS By MS/MS 1 1 110190000 0 0 0 0 51426000 58762000 0 0 4234 226 4643 25281;25282 19057;19058 19058 2 0 0 0 0 791750000 890630000 0 0 TDKTIAFSLLDLAPIPEGSSAR ______________________________ SLLDLAPIPEGSSAREAFSHSLDLARLAEK M T D A R E 3 1 0 2 0 0 1 1 0 2 3 1 0 1 2 3 2 0 0 0 0 0 22 1 1 5 2301.2216 P0ADV5 P0ADV5 2 23 yhbW Uncharacterized protein YhbW yes yes 3 4.7854E-62 147.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 987890000 371480000 263140000 0 0 145260000 208000000 0 0 4235 226 4644 25283;25284;25285;25286 19059;19060;19061;19062;19063 19060 5 371480000 269350000 0 0 175230000 230420000 0 0 TDKVYYHHTGHIGGIK IVLNADKVAVTGNKRTDKVYYHHTGHIGGI DKVYYHHTGHIGGIKQATFEEMIARRPERV R T D I K Q 0 0 0 1 0 0 0 3 3 2 0 2 0 0 0 0 2 0 2 1 0 0 16 1 0 0 1824.9271 P0AA10 P0AA10 70 85 rplM 50S ribosomal protein L13 yes yes 3;4;5 1.1599E-19 112.12 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 258110000 57271000 30241000 0 0 77615000 92985000 0 0 4236 182 4645 25287;25288;25289;25290;25291;25292;25293;25294;25295;25296 19064;19065;19066;19067;19068;19069;19070;19071;19072 19072 9 81619000 30954000 0 0 107940000 103010000 0 0 TDLHTDVER ______________________________ ______________________________ M T D E R Y 0 1 0 2 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 1 0 0 9 0 1 0 1084.5149 P0A8P6 P0A8P6 2 10 xerC Tyrosine recombinase XerC yes yes 2;3 1.9442E-09 122.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 58335000 17759000 20162000 0 0 11213000 9201200 0 0 4237 150 4646 25297;25298;25299;25300;25301;25302;25303;25304 19073;19074;19075;19076;19077;19078;19079 19076 7 17759000 20638000 0 0 13526000 10193000 0 0 TDLIQRPR ______________________________ ______________________________ M T D P R R 0 2 0 1 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 8 1 0 1 997.56688 P0ACB2 P0ACB2 2 9 hemB Delta-aminolevulinic acid dehydratase yes yes 2 1.1119E-24 146.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70585000 22492000 17578000 0 0 14729000 15787000 0 0 4238 207 4647 25305;25306;25307;25308 19080;19081;19082;19083 19081 4 22492000 17992000 0 0 17767000 17489000 0 0 TDNGKLFSTGNHP KHKILVIAADERYLPTDNGKLFSTGNHPIE LPTDNGKLFSTGNHPIETLLPLYHLHAAGF P T D H P I 0 0 2 1 0 0 0 2 1 0 1 1 0 1 1 1 2 0 0 0 0 0 13 1 0 0 1386.6528 P31658 P31658 63 75 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2;3 0.0011778 64.297 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 33430000 2194900 2461500 0 0 17813000 10961000 0 0 4239 335 4648 25309;25310;25311;25312;25313;25314 19084;19085 19084 2 13249000 14732000 0 0 25360000 15626000 0 0 TDNNTALKKA ______________________________ ______________________________ M T D K A G 2 0 2 1 0 0 0 0 0 0 1 2 0 0 0 0 2 0 0 0 0 0 10 2 0 1 1074.5669 P0A9A9 P0A9A9 2 11 fur Ferric uptake regulation protein yes yes 2;3 0.0012973 83.862 By MS/MS By matching By MS/MS 1 1 6 59264000 1745900 0 0 0 998710 56519000 0 0 4240 162 4649 25315;25316;25317;25318;25319;25320;25321;25322 19086;19087;19088;19089;19090;19091;19092;19093;19094 19089 5 10539000 0 0 0 1421900 80568000 0 0 TDNNTALKKAGLKVTLPRLKILE ______________________________ KAGLKVTLPRLKILEVLQEPDNHHVSAEDL M T D L E V 2 1 2 1 0 0 1 1 0 1 5 4 0 0 1 0 3 0 0 1 0 0 23 5 0 3 2535.5112 P0A9A9 P0A9A9 2 24 fur Ferric uptake regulation protein yes yes 4;5 5.6427E-17 77.847 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 171230000 2077200 3061300 7973100 12482000 72621000 52811000 0 20205000 4241 162 4650 25323;25324;25325;25326;25327;25328;25329;25330;25331;25332;25333;25334;25335;25336 19095;19096;19097;19098;19099;19100;19101 19098 7 31915000 46685000 67746000 94633000 1118100000 800420000 0 115950000 TDQGPVPVE MGVDELQVGMRFLAETDQGPVPVEITAVED MRFLAETDQGPVPVEITAVEDDHVVVDGNH E T D V E I 0 0 0 1 0 1 1 1 0 0 0 0 0 0 2 0 1 0 0 2 0 0 9 0 0 2 940.45018 P0A9K9 P0A9K9 100 108 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 8.1565E-17 116.73 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 841580000 241280000 232770000 0 0 100510000 267020000 0 0 4242 169 4651 25337;25338;25339;25340 19102;19103 19103 1 3707200000 3549800000 0 0 1547500000 4047000000 0 0 TDQGPVPVEITAVE MGVDELQVGMRFLAETDQGPVPVEITAVED ETDQGPVPVEITAVEDDHVVVDGNHMLAGQ E T D V E D 1 0 0 1 0 1 2 1 0 1 0 0 0 0 2 0 2 0 0 3 0 0 14 0 1 3 1453.73 P0A9K9 P0A9K9 100 113 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 4.8484E-14 90.05 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 552220000 77451000 69916000 69670000 99399000 24902000 32827000 94627000 83426000 4243 169 4652 25341;25342;25343;25344;25345;25346;25347;25348 19104;19105;19106;19107;19108 19106 5 1190000000 1066200000 591980000 753600000 383390000 497550000 728270000 478770000 TDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVE MGVDELQVGMRFLAETDQGPVPVEITAVED GNHMLAGQNLKFNVEVVAIREATEEELAHG E T D V E V 2 0 3 4 0 2 3 3 2 1 2 1 1 1 2 0 2 0 0 7 0 0 36 1 2 4 3885.8843 P0A9K9 P0A9K9 100 135 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 4 8.1736E-101 141.01 By MS/MS By MS/MS 4 3 760320000 0 0 0 0 630240000 130080000 0 0 4244 169 4653;4654 25349;25350;25351;25352;25353;25354;25355 19109;19110;19111;19112;19113;19114 19111 159 6 0 0 0 0 9663800000 1937300000 0 0 TDRPSQQLR AHPPFASWRNSEEARTDRPSQQLRSLNGEW NSEEARTDRPSQQLRSLNGEWRFAWFPAPE R T D L R S 0 2 0 1 0 2 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 9 1 0 1 1099.5734 B8LFD6;P00722 B8LFD6 45 53 lacZ Beta-galactosidase yes no 3 0.00086963 60.398 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19824000 6675000 6589000 0 0 3639800 2920500 0 0 4245 1 4655 25356;25357;25358;25359 19115;19116;19117;19118 19116 4 6675000 6744500 0 0 4390700 3235200 0 0 TDSIDSHVE STFYAQGGIAAVFDETDSIDSHVEDTLIAG AAVFDETDSIDSHVEDTLIAGAGICDRHAV E T D V E D 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 2 1 0 0 1 0 0 9 0 0 0 1001.4302 P10902 P10902 60 68 nadB L-aspartate oxidase yes yes 2 0.0003152 100.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 91547000 9984000 9768300 15222000 12837000 6198700 4260100 14062000 19215000 4246 274 4656 25360;25361;25362;25363;25364;25365;25366;25367 19119;19120;19121;19122;19123;19124;19125 19122 7 153400000 148970000 129340000 97322000 95434000 64569000 108220000 110270000 TDTEVIAHLVNWE LREELKARGYTFVSETDTEVIAHLVNWELK SETDTEVIAHLVNWELKQGGTLREAVLRAI E T D W E L 1 0 1 1 0 0 2 0 1 1 1 0 0 0 0 0 2 1 0 2 0 0 13 0 1 1 1525.7413 P17169 P17169 123 135 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 3.4312E-08 79.148 By MS/MS By MS/MS By MS/MS 1 1 1 36108000 0 0 0 0 11910000 20890000 0 3307900 4247 288 4657 25368;25369;25370 19126;19127;19128 19126 3 0 0 0 0 183360000 316620000 0 18984000 TDVEGLYAIGEVSYTGLHGANR AHYTCGGVMVDDHGRTDVEGLYAIGEVSYT AIGEVSYTGLHGANRMASNSLLECLVYGWS R T D N R M 2 1 1 1 0 0 2 4 1 1 2 0 0 0 0 1 2 0 2 2 0 0 22 0 2 2 2321.1288 P10902 P10902 365 386 nadB L-aspartate oxidase yes yes 2;3 9.7545E-28 101.71 By MS/MS By MS/MS By MS/MS 1 2 2 65788000 0 14371000 0 0 28304000 23112000 0 0 4248 274 4658 25371;25372;25373;25374;25375 19129;19130;19131;19132;19133 19131 5 0 14710000 0 0 34144000 25603000 0 0 TDVLVVDIDQPLEGVVASTIE LVTQFETLQEPGADETDVLVVDIDQPLEGV DIDQPLEGVVASTIEVIKKGK_________ E T D I E V 1 0 0 3 0 1 2 1 0 2 2 0 0 0 1 1 2 0 0 5 0 0 21 0 1 2 2211.1522 P46859 P46859 149 169 gntK Thermoresistant gluconokinase yes yes 2 4.2728E-05 51.211 By MS/MS By MS/MS 1 1 21032000 0 0 0 0 9035500 11996000 0 0 4249 372 4659 25376;25377 19134 19134 1 0 0 0 0 139110000 181820000 0 0 TDVTIKTLA ______________________________ ______________________________ M T D L A A 1 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 3 0 0 1 0 0 9 1 0 0 960.54916 P0A705 P0A705 2 10 infB Translation initiation factor IF-2 yes yes 2 0.013821 60.019 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17277000 1368900 1540300 0 0 10272000 4096000 0 0 4250 90 4660 25378;25379;25380;25381 19135;19136 19136 1 8263500 9218700 0 0 14623000 5838800 0 0 TDVTIKTLAAE ______________________________ ______________________________ M T D A E R 2 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 3 0 0 1 0 0 11 1 0 2 1160.6289 P0A705 P0A705 2 12 infB Translation initiation factor IF-2 yes yes 2 0.021166 48.283 By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 38471000 0 899210 6798500 7806000 0 0 9303700 13664000 4251 90 4661 25382;25383;25384;25385;25386 19137 19137 1 0 13713000 57766000 59182000 0 0 71603000 78413000 TDVTIKTLAAERQTSVE ______________________________ VTIKTLAAERQTSVERLVQQFADAGIRKSA M T D V E R 2 1 0 1 0 1 2 0 0 1 1 1 0 0 0 1 4 0 0 2 0 0 17 2 1 2 1860.9793 P0A705 P0A705 2 18 infB Translation initiation factor IF-2 yes yes 3 0.0010247 44.601 By matching By MS/MS 1 1 15092000 0 0 3009900 0 0 0 0 12082000 4252 90 4662 25387;25388 19138 19138 1 0 0 25575000 0 0 0 0 69335000 TEDAERFGDVGA KRAFIMVLDSFGIGATEDAERFGDVGADTL IGATEDAERFGDVGADTLGHIAEACAKGEA A T E G A D 2 1 0 2 0 0 2 2 0 0 0 0 0 1 0 0 1 0 0 1 0 0 12 1 2 1 1265.5524 P0A6K6 P0A6K6 17 28 deoB Phosphopentomutase yes yes 2 2.9655E-09 100.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 27776000 7584500 8396200 0 0 3989800 7805800 0 0 4253 75 4663 25389;25390;25391;25392;25393;25394;25395 19139;19140;19141 19141 3 96415000 101760000 0 0 61427000 61703000 0 0 TEDEMGLR ITDVYPNSLRGKVVRTEDEMGLRVAETPES LRGKVVRTEDEMGLRVAETPESVIARTRKE R T E L R V 0 1 0 1 0 0 2 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 8 0 2 0 949.4175 P0AEI1 P0AEI1 442 449 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.0087591 54.549 By matching By matching By MS/MS 1 1 1 9147300 3555300 3435400 0 0 2156600 0 0 0 4254 237 4664 25396;25397;25398 19142 19142 1 3555300 3516500 0 0 2601500 0 0 0 TEEEQFAR EDLKRQQAQVEQVLKTEEEQFARTLERGLA QVEQVLKTEEEQFARTLERGLALLDEELAK K T E A R T 1 1 0 0 0 1 3 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 8 0 3 1 1008.4512 P00957 P00957 362 369 alaS Alanine--tRNA ligase yes yes 2 0.0021157 86.472 By MS/MS By MS/MS By MS/MS 1 1 1 6551000 0 0 0 0 2996900 3554100 0 0 4255 33 4665 25399;25400;25401 19143;19144;19145 19144 3 0 0 0 0 3615200 3937100 0 0 TEEFDAIK ______________________________ FLKAQTKTEEFDAIKIALASPDMIRSWSFG K T E I K I 1 0 0 1 0 0 2 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 8 0 2 1 951.45493 P0A8T7 P0A8T7 14 21 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0027978 75.109 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49385000 14577000 9501700 0 0 11066000 14240000 0 0 4256 153 4666 25402;25403;25404;25405 19146;19147;19148;19149 19147 4 14577000 9725900 0 0 13349000 15775000 0 0 TEFDVILK AVAVAAGPVEAAEEKTEFDVILKAAGANKV VEAAEEKTEFDVILKAAGANKVAVIKAVRG K T E L K A 0 0 0 1 0 0 1 0 0 1 1 1 0 1 0 0 1 0 0 1 0 0 8 0 1 0 963.5277 P0A7K2 P0A7K2 53 60 rplL 50S ribosomal protein L7/L12 yes yes 2 0.0089378 54.205 By MS/MS By MS/MS 1 1 8573700 4591400 3982300 0 0 0 0 0 0 4257 108 4667 25406;25407 19150;19151 19150 2 4591400 4076300 0 0 0 0 0 0 TEFIDQLLQR AFDNGISAEQLIEARTEFIDQLLQRLWIEA LIEARTEFIDQLLQRLWIEAGFSQIADLAL R T E Q R L 0 1 0 1 0 2 1 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 10 0 1 0 1261.6667 P27249 P27249 65 74 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 3.6031E-13 120.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 78996000 0 34342000 0 0 20688000 23966000 0 0 4258 320 4668 25408;25409;25410;25411 19152;19153;19154;19155 19152 4 0 35152000 0 0 24957000 26549000 0 0 TEFNHIDEIIR FYNTPARRKFLRTEKTEFNHIDEIIRRIAL RTEKTEFNHIDEIIRRIALARFDVTINLSH K T E I R R 0 1 1 1 0 0 2 0 1 3 0 0 0 1 0 0 1 0 0 0 0 0 11 0 2 0 1385.6939 P23367 P23367 166 176 mutL DNA mismatch repair protein MutL yes yes 2;3 4.1839E-06 103.34 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 93295000 21870000 23456000 0 0 17773000 30196000 0 0 4259 302 4669 25412;25413;25414;25415;25416;25417;25418;25419;25420 19156;19157;19158;19159;19160 19158 5 23435000 24009000 0 0 21439000 33451000 0 0 TEGNAEAGFLDLEK NRQHGCCYVRHIYVKTEGNAEAGFLDLEKS KTEGNAEAGFLDLEKSRRRLRRDKAINHDF K T E E K S 2 0 1 1 0 0 3 2 0 0 2 1 0 1 0 0 1 0 0 0 0 0 14 0 3 2 1492.7046 P27294 P27294 163 176 inaA Protein InaA yes yes 2 1.2759E-107 193.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 121940000 33303000 25018000 0 0 32538000 31078000 0 0 4260 321 4670 25421;25422;25423;25424 19161;19162;19163;19164;19165 19165 5 33303000 25608000 0 0 39250000 34428000 0 0 TEHFFVPSTEK IIEERGDLARASSGRTEHFFVPSTEKTFHR SSGRTEHFFVPSTEKTFHRGSTDYFVNARK R T E E K T 0 0 0 0 0 0 2 0 1 0 0 1 0 2 1 1 2 0 0 1 0 0 11 0 2 1 1320.635 P76104 P76104 280 290 ydcP Uncharacterized protease YdcP yes yes 2 0.0019628 64.103 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21254000 5581500 4793000 0 0 5290100 5589200 0 0 4261 416 4671 25425;25426;25427;25428 19166;19167;19168;19169 19168 4 5581500 4906200 0 0 6381400 6191600 0 0 TEKQLRRGMQNTP WNSWKQSLLRELYFATEKQLRRGMQNTPDM FATEKQLRRGMQNTPDMRERVRHHQLQALA A T E T P D 0 2 1 0 0 2 1 1 0 0 1 1 1 0 1 0 2 0 0 0 0 0 13 3 1 0 1557.8046 P27249 P27249 621 633 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.018604 28.283 By MS/MS By MS/MS 1 1 3524900 719360 0 0 0 0 2805500 0 0 4262 320 4672 25429;25430 19170 19170 1 4342400 0 0 0 0 3999300 0 0 TELPIGAYQVSGEYAMIK PAGAYLDIVRELRERTELPIGAYQVSGEYA PIGAYQVSGEYAMIKFAALAGAIDEEKVVL R T E I K F 2 0 0 0 0 1 2 2 0 2 1 1 1 0 1 1 1 0 2 1 0 0 18 0 2 3 1968.9867 P0ACB2 P0ACB2 263 280 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.00037954 74.46 By MS/MS By MS/MS By MS/MS 1 1 1 12460000 1029400 0 0 0 4745500 6685500 0 0 4263 207 4673 25431;25432;25433 19171;19172 19172 1 1029400 0 0 0 5724500 7406000 0 0 TEMVNLYRDA ADKLEQEKVATLEDATEMVNLYRDALDAGD TLEDATEMVNLYRDALDAGDCVVAEWRPMN A T E D A L 1 1 1 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 10 1 1 0 1210.5652 P0AFG3 P0AFG3 503 512 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 9.5354E-08 118.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 22413000 1580000 4019400 0 0 8084200 8729400 0 0 4264 246 4674;4675 25434;25435;25436;25437;25438;25439;25440 19173;19174;19175;19176;19177 19174 223 4 9537500 24056000 0 0 11509000 12444000 0 0 TEPKPVAQTPK QQAVIEPKKPQATVKTEPKPVAQTPKRTEP ATVKTEPKPVAQTPKRTEPAAPVASTKAPA K T E P K R 1 0 0 0 0 1 1 0 0 0 0 2 0 0 3 0 2 0 0 1 0 0 11 1 1 4 1194.6608 P11557 P11557 274 284 damX Cell division protein DamX yes yes 3 0.0082289 48.44 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 16536000 4973500 4337200 0 0 3730500 3495200 0 0 4265 277 4676 25441;25442;25443;25444 19178;19179;19180 19179 3 4973500 4439600 0 0 4500100 3871900 0 0 TEPLQITTELPGR QGGQQMPAVGVVTVKTEPLQITTELPGRTS VKTEPLQITTELPGRTSAYRIAEVRPQVSG K T E G R T 0 1 0 0 0 1 2 1 0 1 2 0 0 0 2 0 3 0 0 0 0 0 13 0 2 2 1453.7777 P0AE06 P0AE06 47 59 acrA Multidrug efflux pump subunit AcrA yes yes 2 3.9142E-07 85.533 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45203000 9641500 10338000 0 0 11578000 13645000 0 0 4266 232 4677 25445;25446;25447;25448 19181;19182;19183;19184;19185 19182 5 9641500 10582000 0 0 13967000 15116000 0 0 TEQEMLEQGR NLPEAAALLDAPHARTEQEMLEQGRSLLAM APHARTEQEMLEQGRSLLAMGCGAVLMKGG R T E G R S 0 1 0 0 0 2 3 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 10 0 3 0 1219.5503 P76422 P76422 154 163 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2 2.8769E-92 191.45 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 578260000 192870000 159720000 0 0 115730000 109930000 0 0 4267 425 4678;4679 25449;25450;25451;25452;25453;25454;25455;25456 19186;19187;19188;19189;19190;19191;19192;19193;19194 19191 326 9 192870000 163490000 0 0 139610000 121780000 0 0 TEQQLTAMK PTGIYTIPEISSVGKTEQQLTAMKVPYEVG ISSVGKTEQQLTAMKVPYEVGRAQFKHLAR K T E M K V 1 0 0 0 0 2 1 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 9 0 1 1 1048.5223 P27306 P27306 362 370 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 9.33E-28 152.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 143750000 31424000 37084000 4723700 5272000 20578000 24530000 9018600 11121000 4268 323 4680;4681 25457;25458;25459;25460;25461;25462;25463;25464;25465;25466;25467;25468 19195;19196;19197;19198;19199;19200;19201 19201 269 7 31424000 37959000 40137000 39970000 24824000 27174000 69409000 63822000 TEQQYENATR IQYEGRQGGTLQLFRTEQQYENATRDIAVL LQLFRTEQQYENATRDIAVLEDAGVPYQLL R T E T R D 1 1 1 0 0 2 2 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 10 0 2 1 1238.5527 P0A6J5 P0A6J5 143 152 dadA D-amino acid dehydrogenase yes yes 2 0.00098369 51.066 By MS/MS 1 0 0 0 0 0 0 0 0 0 4269 74 4682 25469 19202 19202 1 0 0 0 0 0 0 0 0 TEVELLK LKAEAIHYIGDLVQRTEVELLKTPNLGKKS YIGDLVQRTEVELLKTPNLGKKSLTEIKDV R T E L K T 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 7 0 2 0 830.47493 P0A7Z4 P0A7Z4 285 291 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 0.0024379 84.244 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 40519000 9952600 7237200 0 0 7162900 11050000 2933500 2182400 4270 135 4683 25470;25471;25472;25473;25474;25475 19203;19204;19205 19203 3 9952600 7408000 0 0 8640700 12241000 22577000 12524000 TEVLLPDGASE PVGFIASAIADGVTETEVLLPDGASEHDYS GVTETEVLLPDGASEHDYSLRPSDVKRLQN E T E S E H 1 0 0 1 0 0 2 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 11 0 1 2 1129.5503 P39172 P39172 49 59 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 0.001706 61.999 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 24758000 1375300 1358900 2605900 6326100 0 968680 7625800 4497100 4271 361 4684 25476;25477;25478;25479;25480;25481;25482 19206;19207 19207 2 21130000 20723000 22142000 47962000 0 14682000 58690000 25808000 TEVTVQLSK PVGSFLFAGPTGVGKTEVTVQLSKALGIEL PTGVGKTEVTVQLSKALGIELLRFDMSEYM K T E S K A 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 1 2 0 0 2 0 0 9 0 1 0 1003.555 P0ABH9 P0ABH9 502 510 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 2 0.0042434 40.352 By MS/MS 1 0 0 0 0 0 0 0 0 0 4272 201 4685 25483 19208 19208 1 0 0 0 0 0 0 0 0 TFAHVDPVKEPIPVIPTCHYMMGGIPTK EVLESRLPGILELSRTFAHVDPVKEPIPVI VIPTCHYMMGGIPTKVTGQALTVNEKGEDV R T F T K V 1 0 0 1 1 0 1 2 2 3 0 2 2 1 5 0 3 0 1 3 0 0 28 1 1 6 3134.5755 P0AC41 P0AC41 336 363 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 4;5 4.0792E-23 81.97 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 74528000 25137000 22694000 0 0 11115000 15582000 0 0 4273 203 4686 25484;25485;25486;25487;25488;25489 19209;19210;19211;19212;19213;19214;19215 19215 7 25137000 23229000 0 0 13407000 17261000 0 0 TFDYLLPEGMTVK ______________________________ PRTFDYLLPEGMTVKAGCRVRVPFGKQQER R T F V K A 0 0 0 1 0 0 1 1 0 0 2 1 1 1 1 0 2 0 1 1 0 0 13 0 1 1 1512.7534 P17888 P17888 15 27 priA Primosomal protein N yes yes 2 2.854E-08 104.52 By MS/MS By MS/MS By MS/MS 1 1 1 24465000 7062100 9293200 0 0 0 8109900 0 0 4274 290 4687 25490;25491;25492 19216;19217;19218 19216 3 7062100 9512600 0 0 0 8983900 0 0 TFEEMIARRP VYYHHTGHIGGIKQATFEEMIARRPERVIE GIKQATFEEMIARRPERVIEIAVKGMLPKG A T F R P E 1 2 0 0 0 0 2 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 10 2 2 1 1248.6285 P0AA10 P0AA10 88 97 rplM 50S ribosomal protein L13 yes yes 3 0.0026789 45.137 By MS/MS 1 7900900 0 0 0 0 0 7900900 0 0 4275 182 4688 25493 19219 19219 174 1 0 0 0 0 0 11263000 0 0 TFEVLATNGDTHLGGEDFDSR FDISIIEIDEVDGEKTFEVLATNGDTHLGG TNGDTHLGGEDFDSRLINYLVEEFKKDQGI K T F S R L 1 1 1 3 0 0 2 3 1 0 2 0 0 2 0 1 3 0 0 1 0 0 21 0 2 1 2280.0295 P0A6Y8 P0A6Y8 215 235 dnaK Chaperone protein DnaK yes yes 2;3 6.0459E-100 178.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 386290000 114390000 92453000 0 0 80635000 98819000 0 0 4276 86 4689 25494;25495;25496;25497;25498;25499;25500;25501 19220;19221;19222;19223;19224;19225;19226;19227;19228 19227 8 114390000 94635000 0 0 97270000 109470000 0 0 TFGMEGLFR SIKDRLVPIIADEARTFGMEGLFRQIGIYS IADEARTFGMEGLFRQIGIYSPNGQQYTPQ R T F F R Q 0 1 0 0 0 0 1 2 0 0 1 0 1 2 0 0 1 0 0 0 0 0 9 0 1 0 1056.5063 P0AFG8 P0AFG8 526 534 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0021086 71.501 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15340000 4039100 4187600 0 0 3754300 3358700 0 0 4277 248 4690 25502;25503;25504;25505 19229;19230;19231;19232 19232 4 4039100 4286500 0 0 4528900 3720700 0 0 TFHALALHIIQQGSK ERIRERLHTEDITARTFHALALHIIQQGSK TFHALALHIIQQGSKKVPIVSKLENDTAAR R T F S K K 2 0 0 0 0 2 0 1 2 2 2 1 0 1 0 1 1 0 0 0 0 0 15 0 0 2 1662.9206 P15038 P15038 274 288 helD Helicase IV yes yes 2;3;4 1.512E-32 143.97 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 3 216040000 39401000 56758000 0 0 41404000 78478000 0 0 4278 281 4691 25506;25507;25508;25509;25510;25511;25512;25513;25514;25515;25516 19233;19234;19235;19236;19237;19238;19239;19240;19241;19242 19235 10 39401000 58098000 0 0 49946000 86936000 0 0 TFHIGGAASR AAQSIGEPGTQLTMRTFHIGGAASRAAAES QLTMRTFHIGGAASRAAAESSIQVKNKGSI R T F S R A 2 1 0 0 0 0 0 2 1 1 0 0 0 1 0 1 1 0 0 0 0 0 10 0 0 2 1015.5199 P0A8T7 P0A8T7 934 943 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.00041411 86.136 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 30888000 7353900 8909000 0 0 8552700 6072700 0 0 4279 153 4692 25517;25518;25519;25520;25521;25522;25523 19243;19244;19245;19246;19247 19244 5 7353900 13386000 0 0 10582000 7242100 0 0 TFLEVSR ______________________________ ______________________________ K T F S R T 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 7 0 1 0 850.45487 P0A8R9 P0A8R9 8 14 hdfR HTH-type transcriptional regulator HdfR yes yes 2 6.0528E-05 114.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 282850000 60614000 57891000 33841000 40540000 46132000 43836000 0 0 4280 152 4693 25524;25525;25526;25527;25528;25529 19248;19249;19250;19251 19248 4 60614000 59257000 287540000 307360000 55650000 48560000 0 0 TFNVGSFASGKE LDPSFHDLTEADFQETFNVGSFASGKETMK FQETFNVGSFASGKETMKLGELLEALKQTY E T F K E T 1 0 1 0 0 0 1 2 0 0 0 1 0 2 0 2 1 0 0 1 0 0 12 1 0 1 1242.5881 P0AFG3 P0AFG3 138 149 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 1.0469E-09 85.958 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 119930000 9936600 11362000 17626000 20980000 5757900 4110900 22136000 28022000 4281 246 4694 25530;25531;25532;25533;25534;25535;25536;25537 19252;19253;19254;19255 19252 3 152670000 173280000 149770000 159060000 88648000 62307000 170360000 160810000 TFQPSVLK ______________________________ ______________________________ R T F L K R 0 0 0 0 0 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 8 0 0 1 918.51747 P0A7P5 P0A7P5 4 11 rpmH 50S ribosomal protein L34 yes yes 2 0.0018648 89.752 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 112590000 24909000 23161000 0 0 30583000 33939000 0 0 4282 117 4695 25538;25539;25540;25541 19256;19257;19258;19259 19259 4 24909000 23707000 0 0 36892000 37597000 0 0 TFQPSVLKR ______________________________ ______________________________ R T F K R N 0 1 0 0 0 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 9 1 0 1 1074.6186 P0A7P5 P0A7P5 4 12 rpmH 50S ribosomal protein L34 yes yes 3 0.0027736 49.715 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41829000 13439000 13177000 0 0 7357600 7855600 0 0 4283 117 4696 25542;25543;25544;25545 19260;19261;19262;19263 19263 4 13439000 13488000 0 0 8875500 8702200 0 0 TFRKGNYVA VTLLEARDRVGGRVATFRKGNYVADLGAMV VGGRVATFRKGNYVADLGAMVVTGLGGNPM A T F V A D 1 1 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 1 1 0 0 9 2 0 0 1054.556 LSD1-FL-His LSD1-FL-His 321 329 yes yes 2;3 0.011668 76.064 By MS/MS By MS/MS By MS/MS 1 1 2 103670000 5467300 3296000 0 0 0 94908000 0 0 4284 24 4697 25546;25547;25548;25549 19264;19265 19265 2 33004000 19727000 0 0 0 135290000 0 0 TFRKGNYVADLGA VTLLEARDRVGGRVATFRKGNYVADLGAMV VATFRKGNYVADLGAMVVTGLGGNPMAVVS A T F G A M 2 1 1 1 0 0 0 2 0 0 1 1 0 1 0 0 1 0 1 1 0 0 13 2 0 1 1410.7256 LSD1-FL-His LSD1-FL-His 321 333 yes yes 2;3 1.4781E-06 72.652 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 141720000 8677700 9332300 0 0 65100000 58605000 0 0 4285 24 4698 25550;25551;25552;25553;25554;25555;25556;25557 19266;19267;19268 19268 3 52383000 55854000 0 0 92682000 83542000 0 0 TFTAKPETVK ______________________________ ______________________________ K T F V K R 1 0 0 0 0 0 1 0 0 0 0 2 0 1 1 0 3 0 0 1 0 0 10 1 1 2 1120.6128 P0AA10 P0AA10 3 12 rplM 50S ribosomal protein L13 yes yes 2;3 4.8205E-92 218.47 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1372200000 307330000 314400000 0 0 358320000 392130000 0 0 4286 182 4699 25558;25559;25560;25561;25562;25563;25564;25565 19269;19270;19271;19272;19273;19274;19275;19276;19277 19271 9 307330000 321820000 0 0 432240000 434400000 0 0 TFTAKPETVKR ______________________________ ______________________________ K T F K R D 1 1 0 0 0 0 1 0 0 0 0 2 0 1 1 0 3 0 0 1 0 0 11 2 1 2 1276.7139 P0AA10 P0AA10 3 13 rplM 50S ribosomal protein L13 yes yes 2;3 3.002E-30 152.28 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1683500000 646690000 523850000 0 0 255640000 257370000 0 0 4287 182 4700 25566;25567;25568;25569;25570;25571;25572;25573 19278;19279;19280;19281;19282;19283;19284;19285 19280 7 646690000 536220000 0 0 308370000 285110000 0 0 TGAVELE FDRGYLSPYFINKPETGAVELESPFILLAD PYFINKPETGAVELESPFILLADKKISNIR E T G L E S 1 0 0 0 0 0 2 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 1 1 717.35448 P0A6F5 P0A6F5 210 216 groL 60 kDa chaperonin yes yes 1 0.0057594 64.776 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 160300000 30619000 42793000 0 0 41618000 45271000 0 0 4288 68 4701 25574;25575;25576;25577 19286 19286 1 470460000 652590000 0 0 640750000 686150000 0 0 TGDAIAKQTRVAAARADE KAEQALKQSRYRLGETGDAIAKQTRVAAAR AIAKQTRVAAARADEYVRENPWTGVGIGAA E T G D E Y 6 2 0 2 0 1 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 0 18 3 0 6 1842.9548 P64581 P64581 57 74 yqjD Uncharacterized protein YqjD yes yes 3 5.3731E-07 66.335 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13230000 4762000 3543500 0 0 2895100 2029500 0 0 4289 397 4702 25578;25579;25580;25581 19287;19288;19289;19290 19288 4 73167000 54039000 0 0 44573000 30760000 0 0 TGDIGLFR GDFSTELCGGTHASRTGDIGLFRIISESGT GGTHASRTGDIGLFRIISESGTAAGVRRIE R T G F R I 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 0 1 0 0 0 0 0 8 0 0 0 877.46577 P00957 P00957 674 681 alaS Alanine--tRNA ligase yes yes 2 0.0037294 55.902 By MS/MS 1 0 0 0 0 0 0 0 0 0 4290 33 4703 25582 19291 19291 1 0 0 0 0 0 0 0 0 TGDNTLIHSHGINR ______________________________ MTGDNTLIHSHGINRRDFMKLCAALAATMG M T G N R R 0 1 2 1 0 0 0 2 2 2 1 0 0 0 0 1 2 0 0 0 0 0 14 0 0 0 1533.7648 P69741 P69741 2 15 hybO Hydrogenase-2 small chain yes yes 4 1.8802E-06 72.891 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 59706000 16591000 20309000 0 0 11565000 11241000 0 0 4291 403 4704 25583;25584;25585;25586;25587 19292;19293;19294;19295 19293 4 16591000 20788000 0 0 13951000 12560000 0 0 TGELYAYMHYGVTPDLLTTAK NALLIFDEVQTGVGRTGELYAYMHYGVTPD YMHYGVTPDLLTTAKALGGGFPVGALLATE R T G A K A 2 0 0 1 0 0 1 2 1 0 3 1 1 0 1 0 4 0 3 1 0 0 21 0 1 3 2343.1457 P77581 P77581 232 252 astC Succinylornithine transaminase yes yes 3 1.2031E-14 88.396 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46963000 7391600 4478400 0 0 19953000 15140000 0 0 4292 437 4705 25588;25589;25590;25591 19296;19297;19298;19299 19298 4 7391600 4584200 0 0 24070000 16772000 0 0 TGFESADYPQGR VEQLALTSEADVRGRTGFESADYPQGRWLR RGRTGFESADYPQGRWLREAWEVAQSVPTK R T G G R W 1 1 0 1 0 1 1 2 0 0 0 0 0 1 1 1 1 0 1 0 0 0 12 0 1 2 1326.584 P06961 P06961 350 361 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 2 0.0037307 54.608 By MS/MS 1 6143800 0 0 0 0 0 6143800 0 0 4293 54 4706 25592 19300 19300 1 0 0 0 0 0 6806000 0 0 TGFPYIQLK SEAEQLNKGFLKRMRTGFPYIQLKLGASLD FLKRMRTGFPYIQLKLGASLDGRTAMASGE R T G L K L 0 0 0 0 0 1 0 1 0 1 1 1 0 1 1 0 1 0 1 0 0 0 9 0 0 1 1065.5859 P25539 P25539 144 152 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 0.0021007 75.854 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32456000 10188000 7664700 0 0 6795000 7808300 0 0 4294 315 4707 25593;25594;25595;25596 19301;19302;19303;19304 19302 4 10188000 7845600 0 0 8196900 8649800 0 0 TGFSGAKITGPKNE AAPQAITLNFSEGVETGFSGAKITGPKNEN ETGFSGAKITGPKNENIKTLPAKRNEQDQK E T G N E N 1 0 1 0 0 0 1 3 0 1 0 2 0 1 1 1 2 0 0 0 0 0 14 2 0 2 1405.7201 P0AA57 P0AA57 58 71 yobA Protein YobA yes yes 2;3 1.7712E-239 273.27 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 2 2 19594000000 564300000 620970000 4584900000 4137500000 280100000 290180000 4352800000 4763400000 4295 184 4708 25597;25598;25599;25600;25601;25602;25603;25604;25605;25606;25607;25608;25609;25610;25611;25612;25613;25614 19305;19306;19307;19308;19309;19310;19311;19312;19313;19314;19315;19316 19308 12 8665000000 9464200000 38957000000 31369000000 4312400000 4398100000 33500000000 27336000000 TGFYMSLIGTPDEQR GNGVEIIDISPMGCRTGFYMSLIGTPDEQR TGFYMSLIGTPDEQRVADAWKAAMEDVLKV R T G Q R V 0 1 0 1 0 1 1 2 0 1 1 0 1 1 1 1 2 0 1 0 0 0 15 0 1 1 1713.8032 P45578 P45578 85 99 luxS S-ribosylhomocysteine lyase yes yes 2 0.0018146 70.488 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 26219000 7429800 6820300 0 0 5998700 5969800 0 0 4296 370 4709 25615;25616;25617;25618 19317;19318;19319 19317 3 7429800 6981300 0 0 7236300 6613200 0 0 TGGAHAAVVTAVAK INSHTEDAAKIVQEKTGGAHAAVVTAVAKA KTGGAHAAVVTAVAKAAFNSAVDAVRAGGR K T G A K A 5 0 0 0 0 0 0 2 1 0 0 1 0 0 0 0 2 0 0 3 0 0 14 0 0 5 1251.6935 P39451 P39451 226 239 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2;3 8.2052E-51 180.97 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 164580000 43353000 47968000 0 0 35178000 38085000 0 0 4297 364 4710 25619;25620;25621;25622;25623;25624;25625;25626 19320;19321;19322;19323;19324;19325;19326 19322 7 43353000 49100000 0 0 42436000 42190000 0 0 TGGASKVYQYTTNP KETVETCHAKAVVLATGGASKVYQYTTNPD ATGGASKVYQYTTNPDISSGDGIAMAWRAG A T G N P D 1 0 1 0 0 1 0 2 0 0 0 1 0 0 1 1 3 0 2 1 0 0 14 1 0 1 1485.71 P10902 P10902 204 217 nadB L-aspartate oxidase yes yes 2 5.0811E-05 70.977 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12771000 1390800 1131800 0 0 6003400 4244600 0 0 4298 274 4711 25627;25628;25629;25630 19327 19327 1 8395400 6773900 0 0 8546900 6050700 0 0 TGHALLHTLYQQNLK FGGEQAARTAAAADRTGHALLHTLYQQNLK TGHALLHTLYQQNLKNHTTIFSEWYALDLV R T G L K N 1 0 1 0 0 2 0 1 2 0 4 1 0 0 0 0 2 0 1 0 0 0 15 0 0 1 1735.937 P0AC41 P0AC41 141 155 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2;3;4 4.5163E-168 221.55 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 334420000 88252000 107030000 0 0 50300000 88834000 0 0 4299 203 4712 25631;25632;25633;25634;25635;25636;25637;25638;25639;25640;25641;25642 19328;19329;19330;19331;19332;19333;19334;19335;19336;19337;19338;19339 19331 12 88252000 109560000 0 0 60677000 98408000 0 0 TGHTSGAGFNLIASAVDGQR NGLLWDKTMNVDGLKTGHTSGAGFNLIASA GAGFNLIASAVDGQRRLIAVVMGADSAKGR K T G Q R R 3 1 1 1 0 1 0 4 1 1 1 0 0 1 0 2 2 0 0 1 0 0 20 0 0 3 1957.9606 P33013 P33013 233 252 dacD D-alanyl-D-alanine carboxypeptidase DacD yes yes 3 0.0013854 39.387 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 22146000 6758800 6002200 0 0 4445000 4939700 0 0 4300 341 4713 25643;25644;25645;25646 19340;19341;19342 19342 2 6758800 6143900 0 0 5362000 5472100 0 0 TGIAETPE QAGPTVVPGSATPMETGIAETPEGRRTSRR GSATPMETGIAETPEGRRTSRRKRAKVEYR E T G P E G 1 0 0 0 0 0 2 1 0 1 0 0 0 0 1 0 2 0 0 0 0 0 8 0 1 2 816.38651 LSD1-FL-His LSD1-FL-His 101 108 yes yes 1 0.0015576 79.307 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 2 2 1 1 3 2 1 1 19524000000 2602800000 2280400000 2834900000 2772200000 1112000000 1082800000 2966200000 3872300000 4301 24 4714 25647;25648;25649;25650;25651;25652;25653;25654;25655;25656;25657;25658;25659 19343;19344 19343 0 39972000000 34758000000 24088000000 21017000000 16977000000 16345000000 22829000000 22222000000 TGIAETPEGRRTSRRKRAKVE QAGPTVVPGSATPMETGIAETPEGRRTSRR PEGRRTSRRKRAKVEYREMDESLANLSEDE E T G V E Y 2 5 0 0 0 0 3 2 0 1 0 2 0 0 1 1 3 0 0 1 0 0 21 7 2 3 2397.3313 LSD1-FL-His LSD1-FL-His 101 121 yes yes 4 0.00092305 28.813 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33413000 0 0 4249500 8966100 0 0 8628500 11569000 4302 24 4715 25660;25661;25662;25663 19345;19346 19346 2 0 0 36107000 67977000 0 0 66407000 66390000 TGKVIIIGSGVSGLAAAR NFGIYKRIKPLPTKKTGKVIIIGSGVSGLA VIIIGSGVSGLAAARQLQSFGMDVTLLEAR K T G A R Q 3 1 0 0 0 0 0 4 0 3 1 1 0 0 0 2 1 0 0 2 0 0 18 1 0 3 1668.9887 LSD1-FL-His LSD1-FL-His 280 297 yes yes 2;3 1.3272E-31 125.51 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 168490000 66715000 64367000 0 0 17818000 19594000 0 0 4303 24 4716 25664;25665;25666;25667;25668;25669;25670 19347;19348;19349;19350;19351;19352;19353 19347 6 66715000 65886000 0 0 21494000 21705000 0 0 TGLDIGAR GTDWTIHNHANVFSRTGLDIGARFFMQHLP HANVFSRTGLDIGARFFMQHLPENLEGEIV R T G A R F 1 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 0 0 0 8 0 0 1 801.43447 P42596 P42596 211 218 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 4.6455E-74 189.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 455720000 126200000 134870000 0 0 86422000 108220000 0 0 4304 366 4717 25671;25672;25673;25674 19354;19355;19356;19357 19355 4 126200000 138060000 0 0 104250000 119880000 0 0 TGLMGER AGAAAAIYSARKGIRTGLMGERFGGQILDT YSARKGIRTGLMGERFGGQILDTVDIENYI R T G E R F 0 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 0 0 0 7 0 1 0 762.36942 P35340 P35340 238 244 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 8.215E-18 143.37 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 1045300000 262230000 375370000 0 0 209590000 198070000 0 0 4305 348 4718;4719 25675;25676;25677;25678;25679;25680;25681;25682;25683;25684;25685;25686 19358;19359;19360;19361;19362;19363;19364;19365;19366;19367;19368;19369;19370;19371 19371 286 14 262230000 384230000 0 0 252830000 219420000 0 0 TGMVGSPKRRE TFLFHYNFPPYSVGETGMVGSPKRREIGHG SVGETGMVGSPKRREIGHGRLAKRGVLAVM E T G R E I 0 2 0 0 0 0 1 2 0 0 0 1 1 0 1 1 1 0 0 1 0 0 11 3 0 1 1216.6346 P05055 P05055 390 400 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 0.0067093 39.917 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 48579000 4054800 7421700 8595100 12231000 2295600 3050500 4630700 6298800 4306 48 4720 25687;25688;25689;25690;25691;25692;25693;25694 19372;19373;19374;19375;19376 19373 5 62301000 113180000 73032000 92733000 35343000 46234000 35639000 36148000 TGNRHDLAVEPPAPTVLQK IARPFIGDKAGNFQRTGNRHDLAVEPPAPT HDLAVEPPAPTVLQKLVDEKHGQVVSVGKI R T G Q K L 2 1 1 1 0 1 1 1 1 0 2 1 0 0 3 0 2 0 0 2 0 0 19 1 1 5 2042.0909 P0A6K6 P0A6K6 227 245 deoB Phosphopentomutase yes yes 3;4 3.8689E-05 55.763 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 102930000 43454000 19166000 0 0 23306000 17000000 0 0 4307 75 4721 25695;25696;25697;25698;25699;25700 19377;19378;19379;19380;19381;19382 19378 6 43454000 19618000 0 0 28114000 18832000 0 0 TGNTDSLALQNIGLETDSR GKKLKADCLLYANGRTGNTDSLALQNIGLE DSLALQNIGLETDSRGQLKVNSMYQTAQPH R T G S R G 1 1 2 2 0 1 1 2 0 1 3 0 0 0 0 2 3 0 0 0 0 0 19 0 1 1 2003.976 P27306 P27306 272 290 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2;3 0 307.03 By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 154490000 43132000 45787000 0 0 32167000 33408000 0 0 4308 323 4722 25701;25702;25703;25704;25705;25706 19383;19384;19385;19386;19387 19383 5 74628000 46868000 0 0 38803000 37009000 0 0 TGPEAILELEHMGLPFSR SDYIGDQDAIEYMCKTGPEAILELEHMGLP EAILELEHMGLPFSRLDDGRIYQRPFGGQS K T G S R L 1 1 0 0 0 0 3 2 1 1 3 0 1 1 2 1 1 0 0 0 0 0 18 0 3 3 1996.0088 P0AC41 P0AC41 91 108 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 3 8.6199E-25 102.16 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 504890000 119170000 139520000 0 0 112310000 133890000 0 0 4309 203 4723;4724 25707;25708;25709;25710;25711;25712;25713;25714;25715 19388;19389;19390;19391;19392 19389 182 5 119170000 142810000 0 0 135480000 148520000 0 0 TGPYSVSSQK AAKLLMQDLTFSQLRTGPYSVSSQKELPKY FSQLRTGPYSVSSQKELPKYLSDLQNQHDI R T G Q K E 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 3 1 0 1 1 0 0 10 0 0 1 1052.5138 P77302 P77302 47 56 ydaM Probable diguanylate cyclase YdaM yes yes 2 0.00058836 80.231 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29769000 8687100 8430700 0 0 4334100 8317000 0 0 4310 429 4725 25716;25717;25718;25719 19393;19394;19395;19396;19397 19397 5 8687100 8629700 0 0 5228300 9213400 0 0 TGRADAVVVLE IMGGGSLEEALTELETGRADAVVVLENDLH TELETGRADAVVVLENDLHRHASAIRVNAA E T G L E N 2 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 3 0 0 11 1 0 2 1128.6139 P33602 P33602 558 568 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 0.013401 44.203 By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 53665000 21911000 15031000 2084700 0 6884800 7753500 0 0 4311 345 4726 25720;25721;25722;25723;25724 19398;19399;19400 19398 3 336660000 229220000 17713000 0 106000000 117520000 0 0 TGREVETTLVSKA EGGHSHRRILHAADATGREVETTLVSKALN DATGREVETTLVSKALNHPNIRVLERSNAV A T G K A L 1 1 0 0 0 0 2 1 0 0 1 1 0 0 0 1 3 0 0 2 0 0 13 2 2 0 1389.7464 P10902 P10902 136 148 nadB L-aspartate oxidase yes yes 3 0.0031964 49.929 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13140000 1570900 1452600 0 0 6310100 3805800 0 0 4312 274 4727 25725;25726;25727;25728 19401;19402 19401 2 9483100 8694100 0 0 8983700 5425100 0 0 TGREVETTLVSKALNHP EGGHSHRRILHAADATGREVETTLVSKALN REVETTLVSKALNHPNIRVLERSNAVDLIV A T G H P N 1 1 1 0 0 0 2 1 1 0 2 1 0 0 1 1 3 0 0 2 0 0 17 2 2 1 1850.985 P10902 P10902 136 152 nadB L-aspartate oxidase yes yes 3;4 0.0030565 38.613 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 10907000 360940 390570 0 0 2956300 7199400 0 0 4313 274 4728 25729;25730;25731;25732;25733;25734 19403;19404 19403 2 2178900 2337500 0 0 4208900 10263000 0 0 THGSALFTR DMIRGLDVRTGVLPRTHGSALFTRGETQAL TGVLPRTHGSALFTRGETQALVTATLGTAR R T H T R G 1 1 0 0 0 0 0 1 1 0 1 0 0 1 0 1 2 0 0 0 0 0 9 0 0 1 988.50903 P05055 P05055 337 345 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 1.089E-09 123.72 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 73355000 7340500 10426000 1866500 0 9318400 9200300 14560000 20644000 4314 48 4729 25735;25736;25737;25738;25739;25740;25741 19405;19406;19407;19408 19405 4 7340500 10672000 15860000 0 11241000 10192000 112050000 118470000 THGVDTDYPLDHEFITGGEYR TNAEQNLFEPIVRVRTHGVDTDYPLDHEFI DYPLDHEFITGGEYRRICTLGEKLRGLLEE R T H Y R R 0 1 0 3 0 0 2 3 2 1 1 0 0 1 1 0 3 0 2 1 0 0 21 0 2 1 2421.0873 P0AES6 P0AES6 668 688 gyrB DNA gyrase subunit B yes yes 3;4 1.0253E-72 155.93 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 182560000 29816000 67270000 0 0 54352000 31117000 0 0 4315 239 4730 25742;25743;25744;25745;25746;25747 19409;19410;19411;19412;19413;19414;19415 19413 7 29816000 68858000 0 0 65565000 34470000 0 0 THNLEPYFESFINNLR QTKWELLQQVDTSTRTHNLEPYFESFINNL HNLEPYFESFINNLRRRVDQLKSDQSRLDS R T H L R R 0 1 3 0 0 0 2 0 1 1 2 0 0 2 1 1 1 0 1 0 0 0 16 0 2 1 1992.9694 CON__P04264 CON__P04264 224 239 yes yes 2;3 6.4074E-225 242.01 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 1779300000 291550000 237580000 0 0 612390000 637770000 0 0 + 4316 9 4731 25748;25749;25750;25751;25752;25753;25754;25755;25756;25757 19416;19417;19418;19419;19420;19421;19422;19423 19422 8 291550000 243190000 0 0 758080000 727300000 0 0 THQFELQSVR WKWMMENVLGVPARRTHQFELQSVRRNTFP VPARRTHQFELQSVRRNTFPYRCKCQEHQL R T H V R R 0 1 0 0 0 2 1 0 1 0 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1 0 1243.6309 P39902 P39902 114 123 sprT Protein SprT yes yes 3 0.00080413 53.08 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 19059000 986130 4892500 0 0 6466700 6713200 0 0 4317 365 4732 25758;25759;25760;25761;25762;25763;25764;25765 19424;19425;19426;19427 19427 3 15152000 22991000 0 0 23888000 27375000 0 0 THTALEYK PVQSGSDRILNLMGRTHTALEYKAIIRKLR ILNLMGRTHTALEYKAIIRKLRAARPDIQI R T H Y K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 2 0 1 0 0 0 8 0 1 1 961.4869 P0AEI1 P0AEI1 280 287 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.0065463 58.815 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13376000 4702700 4428600 0 0 2197100 2048000 0 0 4318 237 4733 25766;25767;25768;25769 19428 19428 1 4702700 4533100 0 0 2650400 2268800 0 0 TIAFSLLDLAPIPEGSSAR ______________________________ SLLDLAPIPEGSSAREAFSHSLDLARLAEK K T I A R E 3 1 0 1 0 0 1 1 0 2 3 0 0 1 2 3 1 0 0 0 0 0 19 0 1 5 1957.052 P0ADV5 P0ADV5 5 23 yhbW Uncharacterized protein YhbW yes yes 2;3 1.7259E-107 226.04 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 3 2670100000 0 783420000 0 0 936350000 950310000 0 0 4319 226 4734;4735 25770;25771;25772;25773;25774;25775;25776;25777;25778 19429;19430;19431;19432;19433;19434;19435 19429 22 5 0 801920000 0 0 1129500000 1052700000 0 0 TIAMGSSDGLR LVLEVQQQLGGGIVRTIAMGSSDGLRRGLD GIVRTIAMGSSDGLRRGLDVKDLEHPIEVP R T I L R R 1 1 0 1 0 0 0 2 0 1 1 0 1 0 0 2 1 0 0 0 0 0 11 0 0 1 1106.539 P0ABB4 P0ABB4 54 64 atpD ATP synthase subunit beta yes yes 2 0.00024833 76.827 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 31393000 5906000 6633700 0 0 7626500 11227000 0 0 4320 194 4736 25779;25780;25781;25782;25783;25784 19436;19437;19438 19437 3 12672000 12092000 0 0 9199800 12437000 0 0 TICPDQK ______________________________ SLQRKVLRTICPDQKGLIARITNICYKHEL R T I Q K G 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 7 0 0 1 860.4062 P37051 P37051 11 17 purU Formyltetrahydrofolate deformylase yes yes 2 0.012136 63.148 By MS/MS By MS/MS By MS/MS 1 1 1 7137000 3127200 3172700 0 0 0 837040 0 0 4321 354 4737 25785;25786;25787 19439 19439 0 3127200 3247600 0 0 0 927260 0 0 TIDLGLER PLASWLSYLENLHSKTIDLGLERVSLVAAR LENLHSKTIDLGLERVSLVAARLGVLKPAP K T I E R V 0 1 0 1 0 0 1 1 0 1 2 0 0 0 0 0 1 0 0 0 0 0 8 0 1 0 915.50255 P08192 P08192 27 34 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 2 0.00093192 97.798 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37272000 10439000 9704400 0 0 5989000 11140000 0 0 4322 59 4738 25788;25789;25790;25791 19440;19441;19442;19443 19441 4 10439000 9933500 0 0 7224600 12341000 0 0 TIEVDDELYSYIASHTK ______________________________ EVDDELYSYIASHTKHIGESASDILRRMLK K T I T K H 1 0 0 2 0 0 2 0 1 2 1 1 0 0 0 2 2 0 2 1 0 0 17 0 2 1 1982.9473 P0AFY8 P0AFY8 3 19 seqA Negative modulator of initiation of replication yes yes 3 0.00035058 51.265 By matching By matching By MS/MS By MS/MS 1 1 1 1 27862000 4735000 6891300 0 0 7415400 8819900 0 0 4323 252 4739 25792;25793;25794;25795 19444;19445 19445 2 4735000 7053900 0 0 8945200 9770500 0 0 TIHGAPVGE SRYVVLARELTKTWETIHGAPVGELLAWVK LTKTWETIHGAPVGELLAWVKEDENRRKGE E T I G E L 1 0 0 0 0 0 1 2 1 1 0 0 0 0 1 0 1 0 0 1 0 0 9 0 0 2 879.44503 P67087 P67087 204 212 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2 0.0042681 72.138 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 81979000 3960500 4637000 13047000 14616000 2310200 2645500 17036000 23727000 4324 400 4740 25796;25797;25798;25799;25800;25801;25802;25803;25804;25805 19446;19447;19448;19449 19447 4 60852000 70715000 110860000 110810000 35568000 40096000 131110000 136160000 TILFVDEVHR EAIERARQNRNAGRRTILFVDEVHRFNKSQ NAGRRTILFVDEVHRFNKSQQDAFLPHIED R T I H R F 0 1 0 1 0 0 1 0 1 1 1 0 0 1 0 0 1 0 0 2 0 0 10 0 1 0 1227.6612 P0AAZ4 P0AAZ4 108 117 rarA Replication-associated recombination protein A yes yes 2;3 7.6576E-05 91.584 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 113900000 19992000 37626000 0 0 25306000 30980000 0 0 4325 189 4741 25806;25807;25808;25809;25810;25811;25812 19450;19451;19452;19453;19454;19455 19450 6 19992000 38514000 0 0 30527000 34319000 0 0 TILPRMKSGE SLALTIDRVIPYWNETILPRMKSGERVIIA PYWNETILPRMKSGERVIIAAHGNSLRALV E T I G E R 0 1 0 0 0 0 1 1 0 1 1 1 1 0 1 1 1 0 0 0 0 0 10 2 0 1 1130.6118 P62707 P62707 168 177 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase yes yes 3 0.0048608 31.494 By MS/MS 1 0 0 0 0 0 0 0 0 0 4326 390 4742 25813 19456 19456 311 1 0 0 0 0 0 0 0 0 TIPLQDQDTR LIALNRSEDAEAVLKTIPLQDQDTRYQGLV EAVLKTIPLQDQDTRYQGLVAQIELLKQAA K T I T R Y 0 1 0 2 0 2 0 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 10 0 0 1 1185.599 P77395 P77395 173 182 ybbN Uncharacterized protein YbbN yes yes 2 0.013194 54.416 By MS/MS By matching By matching By matching 1 1 1 1 14204000 4456000 4426400 0 0 2522600 2799200 0 0 4327 431 4743 25814;25815;25816;25817 19457 19457 1 4456000 4530900 0 0 3043000 3100900 0 0 TIRQKVTDVE NVEANVGKPQVAYRETIRQKVTDVEGKHAK VAYRETIRQKVTDVEGKHAKQSGGRGQYGH E T I V E G 0 1 0 1 0 1 1 0 0 1 0 1 0 0 0 0 2 0 0 2 0 0 10 2 0 0 1187.651 P0A6M8 P0A6M8 493 502 fusA Elongation factor G yes yes 2;3 0.0025384 61.65 By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 12605000 1344100 0 2418200 2623900 0 0 2678900 3540000 4328 76 4744 25818;25819;25820;25821;25822;25823 19458;19459 19459 2 20651000 0 20547000 19893000 0 0 20617000 20315000 TISDGLA KIQMACCLVATGEAATISDGLARVNQAF__ LVATGEAATISDGLARVNQAF_________ A T I L A R 1 0 0 1 0 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 7 0 0 0 675.34392 P30177 P30177 308 314 ybiB Uncharacterized protein YbiB yes yes 1 0.010103 58.661 By matching By matching By MS/MS 1 1 1 7879000 0 1315600 0 0 2537300 4026200 0 0 4329 332 4745 25824;25825;25826 19460 19460 1 0 7873800 0 0 3612300 5739300 0 0 TITIAELR QFQLGSVIDIDREAKTITIAELRDEKGELL DIDREAKTITIAELRDEKGELLVPERKIAY K T I L R D 1 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 2 0 0 0 0 0 8 0 1 1 915.53893 P00393 P00393 93 100 ndh NADH dehydrogenase yes yes 2 4.1296E-06 114.78 By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 36787000 14995000 13426000 0 0 8365600 0 0 0 4330 25 4746 25827;25828;25829;25830;25831 19461;19462;19463 19462 3 14995000 13743000 0 0 10091000 0 0 0 TITKDGVSVA PKGRNVVLDKSFGAPTITKDGVSVAREIEL SFGAPTITKDGVSVAREIELEDKFENMGAQ P T I V A R 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 2 0 0 2 0 0 10 1 0 0 989.53933 P0A6F5 P0A6F5 48 57 groL 60 kDa chaperonin yes yes 2 0.00070235 64.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 20974000 1661100 1224100 0 0 9256100 8832800 0 0 4331 68 4747 25832;25833;25834;25835;25836 19464;19465 19464 2 10027000 7326500 0 0 13178000 12591000 0 0 TITKDGVSVAREIELEDKFENMGA PKGRNVVLDKSFGAPTITKDGVSVAREIEL AREIELEDKFENMGAQMVKEVASKANDAAG P T I G A Q 2 1 1 2 0 0 4 2 0 2 1 2 1 1 0 1 2 0 0 2 0 0 24 3 4 1 2651.3112 P0A6F5 P0A6F5 48 71 groL 60 kDa chaperonin yes yes 4 0.0030003 34.155 By MS/MS By MS/MS 1 2 15515000 0 0 0 0 2678100 12837000 0 0 4332 68 4748;4749 25837;25838;25839 19466;19467;19468 19468 78 3 0 0 0 0 3812800 18299000 0 0 TIVREVA THHLFHSVRYPFGRPTIVREVAVIKELERA VRYPFGRPTIVREVAVIKELERAGVIVPKI P T I V A V 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 2 0 0 7 1 1 0 786.45995 P27294 P27294 65 71 inaA Protein InaA yes yes 2 0.017267 65.252 By MS/MS 1 12022000 0 0 0 0 0 12022000 0 0 4333 321 4750 25840 19469 19469 1 0 0 0 0 0 17137000 0 0 TIVVYGTR LKMLEDQNLISAHGKTIVVYGTR_______ LISAHGKTIVVYGTR_______________ K T I T R - 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 2 0 1 2 0 0 8 0 0 0 907.51272 P0ACJ8 P0ACJ8 203 210 crp cAMP-activated global transcriptional regulator CRP yes yes 2 1.9842E-19 144.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 9263700000 2366100000 2292500000 0 0 2115100000 2490100000 0 0 4334 213 4751 25841;25842;25843;25844;25845;25846;25847;25848;25849 19470;19471;19472;19473;19474;19475;19476;19477 19473 8 2366100000 2358100000 0 0 2551400000 2758400000 0 0 TKGHYTFSVK TYTVDWHVVSVDGHKTKGHYTFSVK_____ VDGHKTKGHYTFSVK_______________ K T K V K - 0 0 0 0 0 0 0 1 1 0 0 2 0 1 0 1 2 0 1 1 0 0 10 1 0 0 1166.6084 P0AA57 P0AA57 115 124 yobA Protein YobA yes yes 2;3 1.6271E-61 178.46 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 593870000 199040000 227370000 0 0 82502000 84962000 0 0 4335 184 4752 25850;25851;25852;25853;25854;25855;25856;25857 19478;19479;19480;19481;19482;19483;19484;19485 19480 7 199040000 232730000 0 0 99523000 94119000 0 0 TKHGANHLAEQLNK MIGKGNWQQVLVFTRTKHGANHLAEQLNKD RTKHGANHLAEQLNKDGIRSAAIHGNKSQG R T K N K D 2 0 2 0 0 1 1 1 2 0 2 2 0 0 0 0 1 0 0 0 0 0 14 1 1 2 1559.8168 P25888 P25888 254 267 rhlE ATP-dependent RNA helicase RhlE yes yes 3;4 9.5381E-40 132.24 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 153910000 84183000 22693000 0 0 28738000 18297000 0 0 4336 318 4753 25858;25859;25860;25861;25862;25863;25864 19486;19487;19488;19489;19490;19491;19492;19493 19489 7 84183000 23229000 0 0 34667000 20269000 0 0 TKPHVNVGTIGHVDHGK ______________________________ PHVNVGTIGHVDHGKTTLTAAITTVLAKTY R T K G K T 0 0 1 1 0 0 0 3 3 1 0 2 0 0 1 0 2 0 0 3 0 0 17 1 0 1 1794.9489 P0CE48;P0CE47 P0CE48 9 25 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 3;4;5 3.5919E-24 119.8 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 287620000 55878000 71037000 0 0 79504000 81202000 0 0 4337 269 4754 25865;25866;25867;25868;25869;25870;25871;25872;25873;25874;25875;25876 19494;19495;19496;19497;19498;19499;19500;19501;19502;19503;19504 19502 11 55878000 72714000 0 0 95906000 89954000 0 0 TKTWTGQGRTPAVIKKAMDE AQRPAKYSYVDENGETKTWTGQGRTPAVIK GQGRTPAVIKKAMDEQGKSLDDFLIKQ___ E T K D E Q 2 1 0 1 0 1 1 2 0 1 0 3 1 0 1 0 4 1 0 1 0 0 20 4 0 3 2217.1576 P0ACF8 P0ACF8 106 125 hns DNA-binding protein H-NS yes yes 3;4 1.7361E-08 66.874 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 5 4 3 1 2 2 2373100000 70107000 67714000 376300000 1587900000 14990000 13116000 67964000 175040000 4338 210 4755;4756 25877;25878;25879;25880;25881;25882;25883;25884;25885;25886;25887;25888;25889;25890;25891;25892;25893;25894;25895;25896;25897;25898;25899 19505;19506;19507;19508;19509;19510;19511;19512;19513;19514;19515;19516;19517;19518;19519;19520;19521;19522;19523 19506 186 19 1077200000 1032700000 3197400000 12039000000 230790000 198790000 523070000 1004500000 TKYEHELALR ILQIDNARLAADDFRTKYEHELALRQTVEA ADDFRTKYEHELALRQTVEADVNGLRRVLD R T K L R Q 1 1 0 0 0 0 2 0 1 0 2 1 0 0 0 0 1 0 1 0 0 0 10 1 2 1 1258.667 CON__P08779 CON__P08779 204 213 yes yes 3 0.0002078 80.763 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24404000 0 11104000 0 0 5469100 7831700 0 0 + 4339 10 4757 25900;25901;25902;25903 19524;19525;19526;19527 19526 4 0 11366000 0 0 6597400 8675700 0 0 TLAEAER EAEKLRATADYEVTRTLAEAERQGRIMRGE TADYEVTRTLAEAERQGRIMRGEGDAEAAK R T L E R Q 2 1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 7 0 2 2 788.40283 P0ABC3 P0ABC3 260 266 hflC Modulator of FtsH protease HflC yes yes 2 0.019188 47.849 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7569800 3597800 2300900 0 0 914960 756160 0 0 4340 196 4758 25904;25905;25906;25907 19528 19528 1 3597800 2355200 0 0 1103700 837660 0 0 TLAERQFPVGE AVLGATGAVGEALLETLAERQFPVGEIYAL ALLETLAERQFPVGEIYALARNESAGEQLR E T L G E I 1 1 0 0 0 1 2 1 0 0 1 0 0 1 1 0 1 0 0 1 0 0 11 1 1 2 1245.6354 P08390 P08390 23 33 usg USG-1 protein yes yes 2 0.00077886 70.056 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 27451000 2798800 2424000 3958400 6352300 0 0 6563500 5353600 4341 60 4759 25908;25909;25910;25911;25912;25913 19529;19530;19531 19531 3 43003000 36966000 33634000 48160000 0 0 50514000 30724000 TLALAVTKHHQQALE LEEQQQLDDQADSQETLALAVTKHHQQALE TLALAVTKHHQQALEIARALHQQRQQYAEE E T L L E I 3 0 0 0 0 2 1 0 2 0 3 1 0 0 0 0 2 0 0 1 0 0 15 1 0 3 1658.9104 P05824 P05824 345 359 recN DNA repair protein RecN yes yes 3 0.010605 30.844 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28140000 8416100 11192000 0 0 3684000 4847800 0 0 4342 49 4760 25914;25915;25916;25917 19532;19533;19534;19535 19533 4 129310000 170680000 0 0 56718000 73476000 0 0 TLALLEQQLR DYPQQPGVVLIKVPKTLALLEQQLRALRKV IKVPKTLALLEQQLRALRKVVTSDTRIIAG K T L L R A 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 10 0 1 1 1183.6925 P42596 P42596 117 126 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 3.1499E-92 190.73 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 571690000 178340000 134130000 0 0 132360000 126860000 0 0 4343 366 4761 25918;25919;25920;25921 19536;19537;19538;19539 19537 4 178340000 137300000 0 0 159660000 140530000 0 0 TLALLQAELPLKK GHKAQEEDLPADALRTLALLQAELPLKKAA LRTLALLQAELPLKKAAALAAEIHGVKKNA R T L K K A 2 0 0 0 0 1 1 0 0 0 5 2 0 0 1 0 1 0 0 0 0 0 13 1 1 3 1436.8967 P67087 P67087 249 261 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2;3 2.3243E-10 113.93 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 94723000 23138000 22506000 0 0 25367000 23712000 0 0 4344 400 4762 25922;25923;25924;25925;25926;25927;25928;25929 19540;19541;19542;19543;19544;19545;19546;19547 19547 8 23138000 23037000 0 0 30600000 26268000 0 0 TLAQRSGKSE GKKSTAESIVYSALETLAQRSGKSELEAFE YSALETLAQRSGKSELEAFEVALENVRPTV E T L S E L 1 1 0 0 0 1 1 1 0 0 1 1 0 0 0 2 1 0 0 0 0 0 10 2 0 1 1075.5622 P02359 P02359 49 58 rpsG 30S ribosomal protein S7 yes yes 2 0.009949 52.255 By MS/MS 1 837030 0 0 0 0 0 0 837030 0 4345 36 4763 25930 19548 19548 1 0 0 0 0 0 0 6442000 0 TLAQRSGKSELE GKKSTAESIVYSALETLAQRSGKSELEAFE ALETLAQRSGKSELEAFEVALENVRPTVEV E T L L E A 1 1 0 0 0 1 2 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 12 2 1 1 1317.6888 P02359 P02359 49 60 rpsG 30S ribosomal protein S7 yes yes 3 0.014471 29.544 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 26168000 0 0 3481400 3335900 0 0 7436800 11914000 4346 36 4764 25931;25932;25933;25934 19549 19549 1 0 0 29581000 25291000 0 0 57235000 68375000 TLDEVKPEIAELAETYPEVK TAIRNAYKLIYRSGKTLDEVKPEIAELAET KPEIAELAETYPEVKAFTDFFARSTRGLIR K T L V K A 2 0 0 1 0 0 5 0 0 1 2 2 0 0 2 0 2 0 1 2 0 0 20 1 5 4 2273.1679 P0A722 P0A722 228 247 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2;3 1.7218E-53 147.25 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 123740000 34740000 26935000 0 0 25233000 36834000 0 0 4347 92 4765 25935;25936;25937;25938;25939;25940;25941;25942 19550;19551;19552;19553;19554;19555 19554 6 34740000 27570000 0 0 30438000 40804000 0 0 TLDFFLRTVDLTDKPS LDWEPKIDMQETIDETLDFFLRTVDLTDKP LDFFLRTVDLTDKPS_______________ E T L P S - 0 1 0 3 0 0 0 0 0 0 3 1 0 2 1 1 3 0 0 1 0 0 16 2 0 1 1866.9727 P77398 P77398 645 660 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 5.1554E-149 235.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 4 3 2 4 9294700000 243420000 402250000 23306000 15120000 3668600000 4834600000 13131000 94204000 4348 432 4766 25943;25944;25945;25946;25947;25948;25949;25950;25951;25952;25953;25954;25955;25956;25957;25958;25959;25960;25961;25962 19556;19557;19558;19559;19560;19561;19562;19563;19564;19565;19566;19567;19568;19569;19570;19571;19572 19562 16 3736100000 6134300000 198030000 114630000 56459000000 73257000000 101060000 540620000 TLDFLQEQSLITIREEEGGKKQIA LTQGNYTPSPGVIYPTLDFLQEQSLITIRE LITIREEEGGKKQIALTEQGAQWLEENREQ P T L I A L 1 1 0 1 0 3 4 2 0 3 3 2 0 1 0 1 2 0 0 0 0 0 24 3 4 0 2745.4549 P64588 P64588 103 126 yqjI Transcriptional regulator YqjI yes yes 3;4 0.002949 35.703 By MS/MS By MS/MS 1 2 14513000 0 0 0 0 4193500 10320000 0 0 4349 398 4767 25963;25964;25965 19573;19574;19575 19573 3 0 0 0 0 5970200 14711000 0 0 TLDSLSQRRGYNNRSE ______________________________ LDSLSQRRGYNNRSEAIRDILRSALAQEAT E T L S E A 0 3 2 1 0 1 1 1 0 0 2 0 0 0 0 3 1 0 1 0 0 0 16 3 0 0 1894.9246 P0A6Z6 P0A6Z6 15 30 nikR Nickel-responsive regulator yes yes 4 0.0032917 29.733 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 58523000 969650 967780 21384000 16028000 1305300 2379200 15490000 0 4350 89 4768 25966;25967;25968;25969;25970;25971;25972 19576;19577 19577 2 14898000 14759000 181690000 121510000 20096000 36061000 119210000 0 TLEEMLE NIRTLRAQARECTLETLEEMLEKLEVVVNE QARECTLETLEEMLEKLEVVVNERREEESA E T L L E K 0 0 0 0 0 0 3 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 7 0 2 0 863.39464 P0ACF8 P0ACF8 25 31 hns DNA-binding protein H-NS yes yes 1 1.2249E-36 135.82 By matching By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 2 210340000 2688500 0 57980000 49028000 0 0 43299000 57342000 4351 210 4769;4770 25973;25974;25975;25976;25977;25978;25979;25980;25981 19578;19579 19579 187 1 41308000 0 492650000 371710000 0 0 333240000 329080000 TLEEPPEHVK EVHMLSRHSFNALLKTLEEPPEHVKFLLAT NALLKTLEEPPEHVKFLLATTDPQKLPVTI K T L V K F 0 0 0 0 0 0 3 0 1 0 1 1 0 0 2 0 1 0 0 1 0 0 10 0 3 2 1177.5979 P06710 P06710 142 151 dnaX DNA polymerase III subunit tau yes yes 2;3 1.3439E-10 122.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 111080000 32864000 40090000 0 0 13423000 24707000 0 0 4352 51 4771 25982;25983;25984;25985;25986;25987;25988 19580;19581;19582;19583;19584;19585;19586 19582 7 32864000 41036000 0 0 16192000 27370000 0 0 TLFLNAKLPTGKE VVMPVRTLFEMTLGETLFLNAKLPTGKEFM GETLFLNAKLPTGKEFMPREISLLIGEEGN E T L K E F 1 0 1 0 0 0 1 1 0 0 3 2 0 1 1 0 2 0 0 0 0 0 13 2 0 2 1430.8133 P0AFZ1 P0AFZ1 101 113 sseB Protein SseB yes yes 2;3 0.0020556 51.092 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 1 2 48761000 2988500 4090600 2112400 18116000 1541700 3016000 1508400 15387000 4353 253 4772 25989;25990;25991;25992;25993;25994;25995;25996;25997;25998 19587;19588;19589;19590;19591 19589 5 45917000 62382000 17949000 137350000 23735000 45712000 11609000 88304000 TLFTVSAGGQPAYSQDFAPLPADIR HKSGIVAFKNAFHGRTLFTVSAGGQPAYSQ PAYSQDFAPLPADIRHAAYNDINSASALID R T L I R H 4 1 0 2 0 2 0 2 0 1 2 0 0 2 3 2 2 0 1 1 0 0 25 0 0 7 2621.3126 P77581 P77581 142 166 astC Succinylornithine transaminase yes yes 3 1.3731E-17 81.312 By MS/MS By MS/MS By MS/MS 1 1 1 74183000 0 21994000 0 0 25389000 26800000 0 0 4354 437 4773 25999;26000;26001 19592;19593;19594 19593 3 0 22513000 0 0 30627000 29689000 0 0 TLGSLRPDKR RVILIKLADRTHNMRTLGSLRPDKRRRIAR THNMRTLGSLRPDKRRRIARETLEIYSPLA R T L K R R 0 2 0 1 0 0 0 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 10 2 0 1 1141.6568 P0AG24 P0AG24 146 155 spoT Bifunctional (p)ppGpp synthase/hydrolase SpoT;GTP pyrophosphokinase;Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase yes yes 3 0.013898 35.652 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12298000 3406500 2914200 0 0 2913600 3063300 0 0 4355 254 4774 26002;26003;26004;26005 19595 19595 1 3406500 2983000 0 0 3514700 3393500 0 0 TLIALNRSEDAE QLSNQNGEIGLLLAETLIALNRSEDAEAVL LAETLIALNRSEDAEAVLKTIPLQDQDTRY E T L A E A 2 1 1 1 0 0 2 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 12 1 1 2 1330.6729 P77395 P77395 157 168 ybbN Uncharacterized protein YbbN yes yes 2 1.7943E-05 68.657 By MS/MS By MS/MS By MS/MS 1 1 1 15575000 0 0 0 5728400 0 0 4464100 5382300 4356 431 4775 26006;26007;26008 19596;19597 19597 2 0 0 0 43430000 0 0 34357000 30888000 TLIFYESTHR KGRRDALKAIEAEPRTLIFYESTHRLLDSL EAEPRTLIFYESTHRLLDSLEDIVAVLGES R T L H R L 0 1 0 0 0 0 1 0 1 1 1 0 0 1 0 1 2 0 1 0 0 0 10 0 1 0 1265.6404 P67087 P67087 165 174 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2;3 8.4223E-07 94.309 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 49893000 12750000 0 0 0 13732000 23411000 0 0 4357 400 4776 26009;26010;26011;26012;26013 19598;19599;19600;19601;19602 19600 5 12750000 0 0 0 16565000 25934000 0 0 TLKVDFLSKLPE IRYGVSRIAYSKDFETLKVDFLSKLPEMLK DFETLKVDFLSKLPEMLKMFEDRLCHKTYL E T L P E M 0 0 0 1 0 0 1 0 0 0 3 2 0 1 1 1 1 0 0 1 0 0 12 2 0 1 1388.7915 GST-Nek6 GST-Nek6 117 128 yes yes 2;3 7.3837E-10 104.22 By MS/MS By MS/MS By MS/MS 2 2 2 68746000 0 0 0 0 27815000 32686000 0 8245800 4358 23 4777 26014;26015;26016;26017;26018;26019 19603;19604;19605;19606 19604 4 0 0 0 0 428230000 495400000 0 47321000 TLLAETLAR GKSNILLIGPTGSGKTLLAETLARLLDVPF PTGSGKTLLAETLARLLDVPFTMADATTLT K T L A R L 2 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 0 0 0 9 0 1 2 986.57605 P0A6H1 P0A6H1 126 134 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 2 0.0024098 59.245 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 20289000 465980 8094800 0 0 2077200 9650900 0 0 4359 70 4778 26020;26021;26022;26023;26024;26025;26026 19607;19608;19609 19607 3 2812900 11123000 0 0 2957300 12083000 0 0 TLLAKLQE RLFALHDHNEQQKAETLLAKLQEGQNIALV NEQQKAETLLAKLQEGQNIALVSDAGTPLI E T L Q E G 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 1 0 1 914.54368 P67087 P67087 76 83 rsmI Ribosomal RNA small subunit methyltransferase I yes yes 2 0.0089489 66.429 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 101280000 7181900 5730200 18300000 22620000 3983500 3465500 14217000 25784000 4360 400 4779 26027;26028;26029;26030;26031;26032;26033;26034 19610 19610 1 110350000 87387000 155490000 171490000 61329000 52524000 109420000 147970000 TLLDIDNTR DLKDQIVDLTVGNNKTLLDIDNTRMTLDDF TVGNNKTLLDIDNTRMTLDDFRIKFEMEQN K T L T R M 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 9 0 0 0 1059.556 CON__P35527 CON__P35527 225 233 yes yes 2 3.7616E-75 186.3 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1316400000 207560000 185580000 0 0 489330000 433920000 0 0 + 4361 15 4780 26035;26036;26037;26038 19611;19612;19613;19614 19613 4 207560000 189960000 0 0 590280000 480680000 0 0 TLLEGEESR MNTKLALDLEIATYRTLLEGEESRMSGECA EIATYRTLLEGEESRMSGECAPNVSVSVST R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 9 0 3 0 1032.5088 CON__P04264 CON__P04264 484 492 no no 2 5.796E-85 170.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1036200000 0 0 0 0 512180000 524040000 0 0 + 4362 9 4781 26039;26040;26041;26042 19615;19616;19617 19616 3 0 0 0 0 617840000 580520000 0 0 TLNAYMDK DGGTHLAGFRAAMTRTLNAYMDKEGYSKKA FRAAMTRTLNAYMDKEGYSKKAKVSATGDD R T L D K E 1 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 8 0 0 1 954.44807 P0AES6 P0AES6 292 299 gyrB DNA gyrase subunit B yes yes 2 0.0030815 70.919 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46719000 9839600 14643000 0 0 10723000 11513000 0 0 4363 239 4782 26043;26044;26045;26046 19618;19619;19620;19621 19620 4 9839600 14989000 0 0 12935000 12754000 0 0 TLNAYMDKEGYSK DGGTHLAGFRAAMTRTLNAYMDKEGYSKKA TRTLNAYMDKEGYSKKAKVSATGDDAREGL R T L S K K 1 0 1 1 0 0 1 1 0 0 1 2 1 0 0 1 1 0 2 0 0 0 13 1 1 1 1518.7024 P0AES6 P0AES6 292 304 gyrB DNA gyrase subunit B yes yes 3 0.0003346 63.181 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21508000 7265700 6011100 0 0 4335300 3895500 0 0 4364 239 4783 26047;26048;26049;26050 19622;19623;19624;19625;19626 19624 5 7265700 6152900 0 0 5229700 4315400 0 0 TLNDAVEVK GQVITIKGKNGELTRTLNDAVEVKHADNTL NGELTRTLNDAVEVKHADNTLTFGPRDGYA R T L V K H 1 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 9 0 1 1 987.52368 P0AG55 P0AG55 36 44 rplF 50S ribosomal protein L6 yes yes 2 0.0020559 81.296 By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 282900000 2413500 0 0 0 8215600 5830900 266440000 0 4365 259 4784 26051;26052;26053;26054;26055 19627;19628 19627 2 2413500 0 0 0 52098000 6459300 2050500000 0 TLNDMRQEYEQLIAK VNVEINVAPGKDLTKTLNDMRQEYEQLIAK TLNDMRQEYEQLIAKNRKDIENQYETQITQ K T L A K N 1 1 1 1 0 2 2 0 0 1 2 1 1 0 0 0 1 0 1 0 0 0 15 1 2 1 1850.9196 CON__P35527 CON__P35527 322 336 yes yes 2;3 7.4936E-06 73.435 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 3 233450000 66708000 36545000 0 0 35119000 95076000 0 0 + 4366 15 4785;4786 26056;26057;26058;26059;26060;26061;26062;26063;26064;26065;26066 19629;19630;19631;19632;19633;19634;19635;19636;19637 19633 20 9 279480000 122190000 0 0 42365000 105320000 0 0 TLQLWLDNPK GPQQTQKVFLFIRNRTLQLWLDNPKIQLTF FIRNRTLQLWLDNPKIQLTFEATLQQLEAP R T L P K I 0 0 1 1 0 1 0 0 0 0 3 1 0 0 1 0 1 1 0 0 0 0 10 0 0 1 1226.6659 LSD1-FL-His LSD1-FL-His 219 228 yes yes 2 6.6689E-49 193.41 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 19756000000 5662300000 4665800000 0 0 4444200000 4984000000 0 0 4367 24 4787 26067;26068;26069;26070;26071 19638;19639;19640;19641;19642;19643;19644;19645;19646 19638 9 5679300000 4775900000 0 0 5361000000 5521200000 0 0 TLQQLEAP QLWLDNPKIQLTFEATLQQLEAPYNSDTVL IQLTFEATLQQLEAPYNSDTVLVHRVHSYL A T L A P Y 1 0 0 0 0 2 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 8 0 1 1 898.476 LSD1-FL-His LSD1-FL-His 236 243 yes yes 1 3.0988E-22 153.15 By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1903100000 169940000 198020000 0 0 433310000 1097000000 0 4768900 4368 24 4788 26072;26073;26074;26075;26076 19647;19648 19648 0 1025800000 1185200000 0 0 616900000 1563800000 0 27368000 TLRVDPTNDRLSALVE TLFTNDLDHGPYISETLRVDPTNDRLSALV LRVDPTNDRLSALVEIYRMMRPGEPPTREA E T L V E I 1 2 1 2 0 0 1 0 0 0 3 0 0 0 1 1 2 0 0 2 0 0 16 2 0 2 1797.9585 P0A8V2 P0A8V2 350 365 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.0041919 35.303 By MS/MS 1 0 0 0 0 0 0 0 0 0 4369 154 4789 26077 19649 19649 1 0 0 0 0 0 0 0 0 TLSETIVQLIEDAENKEK IVWQRLAGLAQRRGKTLSETIVQLIEDAEN ETIVQLIEDAENKEKYANKMSSLKQDLQAL K T L E K Y 1 0 1 1 0 1 4 0 0 2 2 2 0 0 0 1 2 0 0 1 0 0 18 1 4 1 2059.0685 P0A8N0 P0A8N0 114 131 matP Macrodomain Ter protein yes yes 3 2.6386E-05 65.107 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 89603000 7073100 3994400 0 0 43915000 34620000 0 0 4370 149 4790 26078;26079;26080;26081 19650;19651 19651 2 7073100 4088700 0 0 52975000 38352000 0 0 TLTGGTVISEEIGMELEKA PGFGDRRKAMLQDIATLTGGTVISEEIGME GTVISEEIGMELEKATLEDLGQAKRVVINK A T L K A T 1 0 0 0 0 0 4 3 0 2 2 1 1 0 0 1 3 0 0 1 0 0 19 1 4 0 1976.9976 P0A6F5 P0A6F5 294 312 groL 60 kDa chaperonin yes yes 2 6.0634E-30 103.83 By MS/MS By matching 1 1 18693000 0 0 0 0 8638100 10055000 0 0 4371 68 4791 26082;26083 19652 19652 1 0 0 0 0 12298000 14334000 0 0 TLTISDNGVGMTR DGELRVRVSFDKDKRTLTISDNGVGMTRDE KRTLTISDNGVGMTRDEVIDHLGTIAKSGT R T L T R D 0 1 1 1 0 0 0 2 0 1 1 0 1 0 0 1 3 0 0 1 0 0 13 0 0 0 1363.6766 P0A6Z3 P0A6Z3 75 87 htpG Chaperone protein HtpG yes yes 2 0.01147 55.401 By MS/MS 1 8324300 0 0 0 0 8324300 0 0 0 4372 88 4792 26084 19653 19653 0 0 0 0 0 10042000 0 0 0 TLTLSAK ______________________________ ______________________________ K T L A K S 1 0 0 0 0 0 0 0 0 0 2 1 0 0 0 1 2 0 0 0 0 0 7 0 0 1 732.43815 P0AF48 P0AF48 6 12 yjbQ UPF0047 protein YjbQ yes yes 1;2 0.0017815 76.035 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 147620000 43294000 32904000 0 0 37506000 33919000 0 0 4373 243 4793 26085;26086;26087;26088;26089;26090;26091;26092 19654;19655;19656;19657;19658 19657 4 43294000 33680000 0 0 45244000 37575000 0 0 TLTLSGMLAEAIR TIPLSDEIKSLPNVRTLTLSGMLAEAIRRI VRTLTLSGMLAEAIRRISNEESISAMFEH_ R T L I R R 2 1 0 0 0 0 1 1 0 1 3 0 1 0 0 1 2 0 0 0 0 0 13 0 1 2 1374.7541 P0A717 P0A717 289 301 prs Ribose-phosphate pyrophosphokinase yes yes 2 0.010826 43.512 By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 95746000 18432000 15313000 0 0 27889000 34112000 0 0 4374 91 4794 26093;26094;26095;26096;26097 19659 19659 1 18432000 15674000 0 0 33830000 37788000 0 0 TLTQEDVEALEK PVIDNGFYYDVDLDRTLTQEDVEALEKRMH LDRTLTQEDVEALEKRMHELAEKNYDVIKK R T L E K R 1 0 0 1 0 1 3 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 12 0 3 1 1374.6878 P0A8M3 P0A8M3 111 122 thrS Threonine--tRNA ligase yes yes 2 1.2223E-35 150.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 152230000 27145000 23323000 0 0 50837000 50926000 0 0 4375 147 4795 26098;26099;26100;26101 19660;19661;19662;19663;19664 19661 5 27145000 23874000 0 0 61325000 56415000 0 0 TLTQEDVEALEKR PVIDNGFYYDVDLDRTLTQEDVEALEKRMH DRTLTQEDVEALEKRMHELAEKNYDVIKKK R T L K R M 1 1 0 1 0 1 3 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 13 1 3 1 1530.789 P0A8M3 P0A8M3 111 123 thrS Threonine--tRNA ligase yes yes 2;3 2.2609E-10 120.96 By MS/MS By MS/MS By matching By matching 1 2 1 1 45384000 5968500 32654000 0 0 3263900 3497300 0 0 4376 147 4796 26102;26103;26104;26105;26106 19665;19666;19667 19667 3 5968500 33425000 0 0 3937300 3874200 0 0 TLVLGPGSINQAHQP VNYCTEAPFIQTLCPTLVLGPGSINQAHQP TLVLGPGSINQAHQPDEYLETRFIKPTREL P T L Q P D 1 0 1 0 0 2 0 2 1 1 2 0 0 0 2 1 1 0 0 1 0 0 15 0 0 2 1530.8154 P23908 P23908 343 357 argE Acetylornithine deacetylase yes yes 2 1.8441E-08 81.525 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13355000 1022600 1200600 0 0 3248100 7884000 0 0 4377 308 4797 26107;26108;26109;26110 19668 19668 1 6172800 7185400 0 0 4624300 11239000 0 0 TLVSALAR YNMAGWRIGFMVGNKTLVSALARIKSYHDY GFMVGNKTLVSALARIKSYHDYGTFTPLQV K T L A R I 2 1 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 8 0 0 2 829.50215 P77434 P77434 261 268 alaC Glutamate-pyruvate aminotransferase AlaC yes yes 2 0.0012573 68.081 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4378 433 4798 26111;26112 19669;19670 19669 2 0 0 0 0 0 0 0 0 TLYYIVKGSVAVLIKDEEGKE YPSKSTLIHQGEKAETLYYIVKGSVAVLIK KGSVAVLIKDEEGKEMILSYLNQGDFIGEL E T L K E M 1 0 0 1 0 0 3 2 0 2 2 3 0 0 0 1 1 0 2 3 0 0 21 3 2 1 2353.2781 P0ACJ8 P0ACJ8 39 59 crp cAMP-activated global transcriptional regulator CRP yes yes 3 1.4713E-74 153.83 By MS/MS By MS/MS 1 1 34139000 0 0 0 0 19950000 14188000 0 0 4379 213 4799 26113;26114 19671;19672 19671 2 0 0 0 0 307160000 215040000 0 0 TMEGFGIHTFR VMWAMSDRGIPRSYRTMEGFGIHTFRLINA RSYRTMEGFGIHTFRLINAEGKATFVRFHW R T M F R L 0 1 0 0 0 0 1 2 1 1 0 0 1 2 0 0 2 0 0 0 0 0 11 0 1 0 1294.6128 P21179 P21179 268 278 katE Catalase HPII yes yes 2;3 8.8125E-52 155.42 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 410540000 108400000 110180000 0 0 79014000 112940000 0 0 4380 293 4800;4801 26115;26116;26117;26118;26119;26120;26121;26122;26123;26124;26125;26126;26127;26128;26129;26130 19673;19674;19675;19676;19677;19678;19679;19680;19681;19682;19683;19684;19685;19686 19682 252 14 108400000 112780000 0 0 95315000 125110000 0 0 TMERVKGILE GEEYKLDGVKPPKKETMERVKGILEQYGHK PPKKETMERVKGILEQYGHKVMF_______ E T M L E Q 0 1 0 0 0 0 2 1 0 1 1 1 1 0 0 0 1 0 0 1 0 0 10 2 1 0 1174.638 P0A9N4 P0A9N4 229 238 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2;3 0.0031882 56.729 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 4 4 3 4 4 397900000 15282000 19315000 73768000 87153000 25786000 26794000 62420000 87382000 4381 171 4802;4803 26131;26132;26133;26134;26135;26136;26137;26138;26139;26140;26141;26142;26143;26144;26145;26146;26147;26148;26149;26150;26151;26152;26153;26154;26155;26156;26157;26158;26159 19687;19688;19689;19690;19691;19692;19693;19694;19695;19696 19692 164 10 234800000 137950000 626800000 660760000 282130000 291250000 480400000 501470000 TMNTPHGDAITVFDLR VDHTRMEAPAVRVAKTMNTPHGDAITVFDL MNTPHGDAITVFDLRFCVPNKEVMPERGIH K T M L R F 1 1 1 2 0 0 0 1 1 1 1 0 1 1 1 0 3 0 0 1 0 0 16 0 0 2 1786.8672 P45578 P45578 24 39 luxS S-ribosylhomocysteine lyase yes yes 3 3.5104E-16 95.767 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49542000 17523000 13672000 0 0 8473200 9873200 0 0 4382 370 4804 26160;26161;26162;26163 19697;19698;19699;19700;19701 19697 5 17523000 13995000 0 0 10221000 10937000 0 0 TNAENEFVTIK VEDYRNKYEDEINKRTNAENEFVTIKKDVD INKRTNAENEFVTIKKDVDGAYMTKVDLQA R T N I K K 1 0 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 0 11 0 2 1 1264.6299 CON__P04264 CON__P04264 278 288 yes yes 2 6.2695E-31 175.41 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 985250000 144090000 123510000 3361400 0 303420000 410870000 0 0 + 4383 9 4805 26164;26165;26166;26167;26168 19702;19703;19704;19705 19703 3 144090000 126430000 28561000 0 366020000 455150000 0 0 TNAENEFVTIKK VEDYRNKYEDEINKRTNAENEFVTIKKDVD NKRTNAENEFVTIKKDVDGAYMTKVDLQAK R T N K K D 1 0 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 0 12 1 2 1 1392.7249 CON__P04264 CON__P04264 278 289 yes yes 2;3 4.5511E-27 139.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1311400000 169590000 194230000 0 0 438620000 508910000 0 0 + 4384 9 4806 26169;26170;26171;26172;26173;26174;26175;26176 19706;19707;19708;19709;19710;19711;19712;19713 19710 7 169590000 198820000 0 0 529110000 563760000 0 0 TNELKADEER KRRVVVGLLLGEVIRTNELKADEERVKGLI GEVIRTNELKADEERVKGLIEEMASAYEDP R T N E R V 1 1 1 1 0 0 3 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 10 1 3 1 1203.5731 P0A850 P0A850 357 366 tig Trigger factor yes yes 2;3 0.0017196 76.465 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 34150000 14693000 13271000 0 0 4090500 2094900 0 0 4385 137 4807 26177;26178;26179;26180;26181;26182;26183;26184 19714;19715;19716;19717;19718 19716 5 14693000 13584000 0 0 4934400 2320700 0 0 TNIQDGSMLHVTHK VVIRGDVHYVQIGARTNIQDGSMLHVTHKS RTNIQDGSMLHVTHKSSYNPDGNPLTIGED R T N H K S 0 0 1 1 0 1 0 1 2 1 1 1 1 0 0 1 2 0 0 1 0 0 14 0 0 0 1579.7777 P0A9W9 P0A9W9 58 71 yrdA Protein YrdA yes yes 2;3;4 2.0429E-39 165.58 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 4 765140000 222450000 246190000 0 0 154140000 142370000 0 0 4386 179 4808;4809 26185;26186;26187;26188;26189;26190;26191;26192;26193;26194;26195;26196;26197;26198 19719;19720;19721;19722;19723;19724;19725;19726;19727;19728;19729;19730;19731;19732 19724 171 14 222450000 252000000 0 0 185940000 157710000 0 0 TNLITGFLGSGK ______________________________ MTRTNLITGFLGSGKTTSILHLLAHKDPNE R T N G K T 0 0 1 0 0 0 0 3 0 1 2 1 0 1 0 1 2 0 0 0 0 0 12 0 0 0 1206.6608 P33030 P33030 4 15 yeiR Uncharacterized protein YeiR yes yes 2 4.4941E-10 115.18 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 83620000 24078000 24220000 0 0 15165000 20157000 0 0 4387 343 4810 26199;26200;26201;26202 19733;19734;19735;19736;19737 19736 5 24078000 24792000 0 0 18294000 22329000 0 0 TNVDLQIR RMKNALQELIIDGIKTNVDLQIRIMNDENF LIIDGIKTNVDLQIRIMNDENFQHGGTNIH K T N I R I 0 1 1 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 8 0 0 0 957.52434 P24182 P24182 416 423 accC Biotin carboxylase yes yes 2 0.0049251 46.426 By MS/MS 1 0 0 0 0 0 0 0 0 0 4388 309 4811 26203 19738 19738 1 0 0 0 0 0 0 0 0 TNVILSMDNNRSLDLDSIIAE LYQAELSQMQTQISETNVILSMDNNRSLDL MDNNRSLDLDSIIAEVKAQNEDIAQKSKAE E T N A E V 1 1 3 3 0 0 1 0 0 3 3 0 1 0 0 3 1 0 0 1 0 0 21 1 0 1 2332.158 CON__P04264 CON__P04264 333 353 yes yes 2 1.9591E-130 188.59 By MS/MS By MS/MS 2 3 75274000 0 0 0 0 44230000 31044000 0 0 + 4389 9 4812;4813 26204;26205;26206;26207;26208 19739;19740;19741;19742 19741 8 4 0 0 0 0 680960000 470530000 0 0 TNVKGVFAAGDCTTVPYKQIIIATGE ERNRMGEIIIDAKCETNVKGVFAAGDCTTV CTTVPYKQIIIATGEGAKASLSAFDYLIRT E T N G E G 3 0 1 1 1 1 1 3 0 3 0 2 0 1 1 0 4 0 1 3 0 0 26 2 0 4 2752.4106 P35340 P35340 478 503 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3 1.1721E-14 81.297 By MS/MS By MS/MS 1 1 54187000 0 0 0 0 24339000 29848000 0 0 4390 348 4814 26209;26210 19743;19744 19743 2 0 0 0 0 374720000 452390000 0 0 TNVPHIFAIGDIVGQPMLAHK EVDDRGFIRVDKQLRTNVPHIFAIGDIVGQ FAIGDIVGQPMLAHKGVHEGHVAAEVIAGK R T N H K G 2 0 1 1 0 1 0 2 2 3 1 1 1 1 2 0 1 0 0 2 0 0 21 0 0 4 2257.2041 P0A9P0 P0A9P0 303 323 lpdA Dihydrolipoyl dehydrogenase yes yes 3;4 2.8481E-28 106.39 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 234810000 54371000 96227000 0 0 34574000 49638000 0 0 4391 172 4815;4816 26211;26212;26213;26214;26215;26216;26217;26218;26219;26220 19745;19746;19747;19748;19749;19750;19751;19752;19753;19754 19747 165 10 54371000 98498000 0 0 41707000 54988000 0 0 TNYAVSGER LCDLASETPEFSDWRTNYAVSGERLRLNTE EFSDWRTNYAVSGERLRLNTEQATAVGAIH R T N E R L 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 9 0 1 1 995.46722 P17888 P17888 188 196 priA Primosomal protein N yes yes 2 0.00018355 68.371 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9434600 0 9434600 0 0 0 0 0 0 4392 290 4817 26221;26222;26223;26224 19755;19756;19757;19758 19755 4 0 9657300 0 0 0 0 0 0 TPAVIKK VDENGETKTWTGQGRTPAVIKKAMDEQGKS KTWTGQGRTPAVIKKAMDEQGKSLDDFLIK R T P K K A 1 0 0 0 0 0 0 0 0 1 0 2 0 0 1 0 1 0 0 1 0 0 7 1 0 2 755.49052 P0ACF8 P0ACF8 115 121 hns DNA-binding protein H-NS yes yes 2 0.00030051 83.377 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 528830000 223250000 209330000 0 0 52267000 43978000 0 0 4393 210 4818 26225;26226;26227;26228 19759;19760;19761;19762 19760 3 223250000 214270000 0 0 63050000 48718000 0 0 TPDDSFLEWHK EIAQRENEATCFGRRTPDDSFLEWHKPASV FGRRTPDDSFLEWHKPASVLHNMVRAVADP R T P H K P 0 0 0 2 0 0 1 0 1 0 1 1 0 1 1 1 1 1 0 0 0 0 11 0 1 1 1373.6252 P77398 P77398 202 212 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 1.2681E-12 101.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 202740000 42402000 57441000 0 0 46868000 56029000 0 0 4394 432 4819 26229;26230;26231;26232;26233;26234;26235 19763;19764;19765;19766;19767;19768;19769 19767 7 42402000 58797000 0 0 56537000 62068000 0 0 TPDDSFLEWHKPASVLHNMVR EIAQRENEATCFGRRTPDDSFLEWHKPASV LEWHKPASVLHNMVRAVADPWPGAFSYVGN R T P V R A 1 1 1 2 0 0 1 0 2 0 2 1 1 1 2 2 1 1 0 2 0 0 21 1 1 3 2478.2114 P77398 P77398 202 222 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3;4;5 1.1681E-152 199.97 By MS/MS By MS/MS By MS/MS By MS/MS 9 4 7 7 10988000000 2611600000 2019700000 0 0 3530600000 2826400000 0 0 4395 432 4820;4821 26236;26237;26238;26239;26240;26241;26242;26243;26244;26245;26246;26247;26248;26249;26250;26251;26252;26253;26254;26255;26256;26257;26258;26259;26260;26261;26262 19770;19771;19772;19773;19774;19775;19776;19777;19778;19779;19780;19781;19782;19783;19784;19785;19786;19787;19788;19789;19790;19791;19792;19793 19787 330 24 2638600000 2067300000 0 0 4286600000 3145500000 0 0 TPELNLFK KRLPTKCSEVVVYFKTPELNLFKESWQDLP EVVVYFKTPELNLFKESWQDLPQNKLTIRL K T P F K E 0 0 1 0 0 0 1 0 0 0 2 1 0 1 1 0 1 0 0 0 0 0 8 0 1 1 960.52803 P0AC53 P0AC53 354 361 zwf Glucose-6-phosphate 1-dehydrogenase;Extracellular death factor yes yes 2 0.0037649 67.169 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 22074000 6835700 4941800 0 0 5432700 4864100 0 0 4396 205 4822 26263;26264;26265;26266 19794;19795;19796 19794 3 6835700 5058400 0 0 6553500 5388300 0 0 TPETHPLTWR ______________________________ KNIIRTPETHPLTWRLRDDKQPVWLDEYRS R T P W R L 0 1 0 0 0 0 1 0 1 0 1 0 0 0 2 0 3 1 0 0 0 0 10 0 1 2 1236.6251 P31979 P31979 7 16 nuoF NADH-quinone oxidoreductase subunit F yes yes 3 0.003418 47.894 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 29170000 6937700 6598000 0 0 8097500 7536800 0 0 4397 336 4823 26267;26268;26269;26270 19797;19798;19799;19800 19800 4 6937700 6753700 0 0 9768000 8349100 0 0 TPGNIAAIRPMK SVAAVGHDAKQMLGRTPGNIAAIRPMKDGV LGRTPGNIAAIRPMKDGVIADFFVTEKMLQ R T P M K D 2 1 1 0 0 0 0 1 0 2 0 1 1 0 2 0 1 0 0 0 0 0 12 1 0 4 1267.7071 P0A9X4 P0A9X4 66 77 mreB Rod shape-determining protein MreB yes yes 3 0.00052989 63.727 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 22828000 5249700 6223300 0 0 4448100 6906400 0 0 4398 180 4824 26271;26272;26273;26274 19801;19802;19803 19803 3 5249700 6370200 0 0 5365800 7650700 0 0 TPGQTLLKPTAQ IRMCIFQHQYLAEHKTPGQTLLKPTAQ___ EHKTPGQTLLKPTAQ_______________ K T P A Q - 1 0 0 0 0 2 0 1 0 0 2 1 0 0 2 0 3 0 0 0 0 0 12 1 0 3 1253.698 P0A951 P0A951 175 186 speG Spermidine N(1)-acetyltransferase yes yes 2 1.4212E-207 236.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 411000000 89860000 102760000 0 0 127120000 91265000 0 0 4399 160 4825 26275;26276;26277;26278 19804;19805;19806;19807 19807 4 89860000 105180000 0 0 153340000 101100000 0 0 TPIEYTRNP HVKKCDVVLPLVAIATPIEYTRNPLRVFEL PLVAIATPIEYTRNPLRVFELDFEENLRII A T P N P L 0 1 1 0 0 0 1 0 0 1 0 0 0 0 2 0 2 0 1 0 0 0 9 1 1 1 1089.5455 P77398 P77398 394 402 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 1.3022E-65 176.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1101800000 79391000 61845000 0 0 673450000 287130000 0 0 4400 432 4826 26279;26280;26281;26282;26283;26284;26285 19808;19809;19810 19810 3 492080000 379500000 0 0 988520000 409300000 0 0 TPIHPNIFYFSTEK EGGIKAFVEYLNKNKTPIHPNIFYFSTEKD KTPIHPNIFYFSTEKDGIGVEVALQWNDGF K T P E K D 0 0 1 0 0 0 1 0 1 2 0 1 0 2 2 1 2 0 1 0 0 0 14 0 1 2 1692.8512 P0AES6 P0AES6 234 247 gyrB DNA gyrase subunit B yes yes 3 0.000479 51.147 By MS/MS By matching By MS/MS 1 1 1 38775000 11528000 15071000 0 0 12176000 0 0 0 4401 239 4827 26286;26287;26288 19811;19812 19812 1 11528000 15426000 0 0 14688000 0 0 0 TPLDTALSLAETIR VFRWGGEEFVLLLPRTPLDTALSLAETIRV RTPLDTALSLAETIRVSVAKVSISGLPRFT R T P I R V 2 1 0 1 0 0 1 0 0 1 3 0 0 0 1 1 3 0 0 0 0 0 14 0 1 3 1499.8195 P77302 P77302 343 356 ydaM Probable diguanylate cyclase YdaM yes yes 2 1.4375E-31 144.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 71155000 20344000 18532000 0 0 16619000 15660000 0 0 4402 429 4828 26289;26290;26291;26292 19813;19814;19815;19816 19814 4 20344000 18969000 0 0 20047000 17348000 0 0 TPLRPPVHE EAALVHEALVARGLETPLRPPVHEMDNETR VARGLETPLRPPVHEMDNETRKSLIAGHMT E T P H E M 0 1 0 0 0 0 1 0 1 0 1 0 0 0 3 0 1 0 0 1 0 0 9 1 0 3 1044.5716 P0A6T5 P0A6T5 22 30 folE GTP cyclohydrolase 1 yes yes 3 0.017899 37.191 By MS/MS By matching By MS/MS 1 1 1 14869000 0 0 0 4120900 0 0 4220600 6527200 4403 81 4829 26293;26294;26295 19817 19817 1 0 0 0 31243000 0 0 32483000 37459000 TPMETGIAETP SAGPQAGPTVVPGSATPMETGIAETPEGRR PGSATPMETGIAETPEGRRTSRRKRAKVEY A T P T P E 1 0 0 0 0 0 2 1 0 1 0 0 1 0 2 0 3 0 0 0 0 0 11 0 2 2 1145.5274 LSD1-FL-His LSD1-FL-His 97 107 yes yes 2 1.1572E-26 147.52 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 285310000 32701000 32486000 0 0 121540000 98591000 0 0 4404 24 4830;4831 26296;26297;26298;26299;26300;26301;26302;26303;26304 19818;19819;19820;19821;19822;19823;19824 19822 41 7 197400000 194430000 0 0 173030000 140540000 0 0 TPPAAVLLK VITVYADRSFTFVTKTPPAAVLLKKAAGIK FTFVTKTPPAAVLLKKAAGIKSGSGKPNKD K T P L K K 2 0 0 0 0 0 0 0 0 0 2 1 0 0 2 0 1 0 0 1 0 0 9 0 0 4 908.5695 P0A7J7 P0A7J7 73 81 rplK 50S ribosomal protein L11 yes yes 2 0.0026524 67.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 127410000 26274000 26764000 0 0 34272000 40099000 0 0 4405 107 4832 26305;26306;26307;26308 19825;19826;19827;19828 19825 4 26274000 27395000 0 0 41342000 44421000 0 0 TPPGGLLQSVDLHPAIK TLLADVERLCPQLVKTPPGGLLQSVDLHPA PGGLLQSVDLHPAIKALKDE__________ K T P I K A 1 0 0 1 0 1 0 2 1 1 3 1 0 0 3 1 1 0 0 1 0 0 17 0 0 4 1741.9727 P23367 P23367 594 610 mutL DNA mismatch repair protein MutL yes yes 3 4.73E-11 81.656 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 98333000 25122000 21566000 0 0 27800000 23845000 0 0 4406 302 4833 26309;26310;26311;26312 19829;19830;19831;19832 19829 4 25122000 22075000 0 0 33536000 26415000 0 0 TPQTIGEELLDYR KLYQRLNPQIDMGQRTPQTIGEELLDYRNY QRTPQTIGEELLDYRNYLEMEVEVNRGSDG R T P Y R N 0 1 0 1 0 1 2 1 0 1 2 0 0 0 1 0 2 0 1 0 0 0 13 0 2 1 1533.7675 P22523 P22523 1329 1341 mukB Chromosome partition protein MukB yes yes 2 1.8799E-05 90.653 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 14744000 4263300 2815100 0 0 3665000 4000800 0 0 4407 300 4834 26313;26314;26315;26316 19833;19834;19835 19835 3 4263300 2881500 0 0 4421100 4432000 0 0 TQALVTATLGTARDAQVLDE VLPRTHGSALFTRGETQALVTATLGTARDA TATLGTARDAQVLDELMGERTDTFLFHYNF E T Q D E L 4 1 0 2 0 2 1 1 0 0 3 0 0 0 0 0 4 0 0 2 0 0 20 1 0 4 2072.075 P05055 P05055 348 367 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 6.8205E-05 50.563 By MS/MS 1 0 0 0 0 0 0 0 0 0 4408 48 4835 26317 19836 19836 1 0 0 0 0 0 0 0 0 TQDATHGNSLSHR KGKGFAGTVKRWNFRTQDATHGNSLSHRVP FRTQDATHGNSLSHRVPGSIGQNQTPGKVF R T Q H R V 1 1 1 1 0 1 0 1 2 0 1 0 0 0 0 2 2 0 0 0 0 0 13 0 0 1 1422.66 P60438 P60438 129 141 rplC 50S ribosomal protein L3 yes yes 2;3;4 1.3127E-10 109.22 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 3 366020000 148560000 176710000 0 0 2971600 37774000 0 0 4409 380 4836 26318;26319;26320;26321;26322;26323;26324;26325;26326;26327;26328 19837;19838;19839;19840;19841;19842;19843;19844 19839 8 148560000 180890000 0 0 3584700 41846000 0 0 TQEELKELLNK HVKDEQIEHWKKIVKTQEELKELLNKMVNL KIVKTQEELKELLNKMVNLKEKIKELHQQY K T Q N K M 0 0 1 0 0 1 3 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 11 1 3 0 1343.7296 LSD1-FL-His LSD1-FL-His 439 449 yes yes 2;3 3.8965E-202 280.49 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 64768000000 20934000000 14546000000 0 0 12994000000 16295000000 0 0 4410 24 4837 26329;26330;26331;26332;26333;26334;26335;26336;26337;26338;26339;26340;26341;26342;26343;26344;26345;26346 19845;19846;19847;19848;19849;19850;19851;19852;19853;19854;19855 19853 9 21222000000 14993000000 0 0 15916000000 18217000000 0 0 TQEELKELLNKMVNLK HVKDEQIEHWKKIVKTQEELKELLNKMVNL QEELKELLNKMVNLKEKIKELHQQYKEASE K T Q L K E 0 0 2 0 0 1 3 0 0 0 4 3 1 0 0 0 1 0 0 1 0 0 16 2 3 0 1929.0605 LSD1-FL-His LSD1-FL-His 439 454 yes yes 3 3.3512E-99 187.37 By MS/MS By MS/MS By MS/MS 1 1 1 68621000 0 18690000 0 0 25188000 24742000 0 0 4411 24 4838 26347;26348;26349 19856;19857;19858 19858 3 0 19131000 0 0 30384000 27409000 0 0 TQEELTPFFKK KGSELQTQAKAYFEKTQEELTPFFKKAGTD YFEKTQEELTPFFKKAGTDLLNFLSSFIDP K T Q K K A 0 0 0 0 0 1 2 0 0 0 1 2 0 2 1 0 2 0 0 0 0 0 11 1 2 1 1366.7133 CON__P81644 CON__P81644 68 78 yes yes 2 0.00078099 59.597 By MS/MS 1 10868000 0 10868000 0 0 0 0 0 0 + 4412 17 4839 26350 19859 19859 0 0 11124000 0 0 0 0 0 0 TQGKLEE RDLTALCKEYDELAETQGKLEEKLQELEAN KEYDELAETQGKLEEKLQELEANPPSDVYL E T Q E E K 0 0 0 0 0 1 2 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 7 1 1 0 803.4025 LSD1-FL-His LSD1-FL-His 502 508 yes yes 2 0.019132 40.573 By MS/MS 1 5860300000 0 0 0 0 0 0 0 5860300000 4413 24 4840 26351 19860 19860 0 0 0 0 0 0 0 0 33631000000 TQGKLEEKLQE RDLTALCKEYDELAETQGKLEEKLQELEAN ELAETQGKLEEKLQELEANPPSDVYLSSRD E T Q Q E L 0 0 0 0 0 2 3 1 0 0 2 2 0 0 0 0 1 0 0 0 0 0 11 2 2 0 1301.6827 LSD1-FL-His LSD1-FL-His 502 512 yes yes 2;3 0 265.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 4 2 2 2 4 2 2 3031000000 38979000 31096000 810220000 798480000 101730000 120200000 818300000 311960000 4414 24 4841 26352;26353;26354;26355;26356;26357;26358;26359;26360;26361;26362;26363;26364;26365;26366;26367;26368;26369;26370;26371;26372 19861;19862;19863;19864;19865;19866;19867;19868;19869 19868 9 594080000 463430000 6884300000 6053800000 1566300000 1772700000 6297900000 1790300000 TQITQIEHE QLIAKNRKDIENQYETQITQIEHEVSSSGQ IENQYETQITQIEHEVSSSGQEVQSSAKEV E T Q H E V 0 0 0 0 0 2 2 0 1 2 0 0 0 0 0 0 2 0 0 0 0 0 9 0 1 0 1097.5353 CON__P35527 CON__P35527 347 355 yes yes 2 9.8651E-26 145.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 251160000 11709000 13921000 20597000 25144000 29904000 19057000 60884000 69943000 + 4415 15 4842 26373;26374;26375;26376;26377;26378;26379;26380 19870;19871;19872;19873 19870 4 179900000 212300000 175010000 190630000 460400000 288830000 468570000 401390000 TQKSTCTGVE IIKVGEEVEIVGIKETQKSTCTGVEMFRKL VGIKETQKSTCTGVEMFRKLLDEGRAGENV E T Q V E M 0 0 0 0 1 1 1 1 0 0 0 1 0 0 0 1 3 0 0 1 0 0 10 1 0 0 1109.5023 P0CE48;P0CE47 P0CE48 251 260 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 0.013949 47.603 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33793000 0 0 7431900 9815900 0 0 6551400 9994000 4416 269 4843 26381;26382;26383;26384 19874 19874 1 0 0 63148000 74420000 0 0 50421000 57354000 TQLVEQK NPEIQPGAQRLHEIRTQLVEQKATCVFAEP AQRLHEIRTQLVEQKATCVFAEPQFRPAVV R T Q Q K A 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 7 0 1 0 844.46543 P39172 P39172 243 249 znuA High-affinity zinc uptake system protein ZnuA yes yes 2 3.7414E-25 151.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 180950000 63742000 58868000 0 0 25637000 32705000 0 0 4417 361 4844 26385;26386;26387;26388 19875;19876;19877;19878;19879;19880;19881;19882 19881 8 63742000 60258000 0 0 30925000 36230000 0 0 TQNVAPPDSRIE GLVRINRQGDDLHIETQNVAPPDSRIELIS HIETQNVAPPDSRIELISSSEADWNALQSA E T Q I E L 1 1 1 1 0 1 1 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 12 1 0 3 1325.6575 P33030 P33030 292 303 yeiR Uncharacterized protein YeiR yes yes 2 4.8492E-10 99.283 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 160250000 10826000 8933200 26640000 30513000 6202900 5893200 29151000 42093000 4418 343 4845 26389;26390;26391;26392;26393;26394;26395;26396 19883;19884;19885;19886;19887 19883 5 166340000 136230000 226360000 231330000 95500000 89320000 224360000 241560000 TQSQDGTFDKLTKKE WKTVRQSIKRLKDLETQSQDGTFDKLTKKE TQSQDGTFDKLTKKEALMRTRELEKLENSL E T Q K E A 0 0 0 2 0 2 1 1 0 0 1 3 0 1 0 1 3 0 0 0 0 0 15 3 0 0 1724.8581 P0A7V0 P0A7V0 119 133 rpsB 30S ribosomal protein S2 yes yes 3;4 7.6929E-10 68.919 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 395310000 36734000 32067000 49645000 56368000 6152500 19343000 95611000 99388000 4419 128 4846 26397;26398;26399;26400;26401;26402;26403;26404;26405;26406;26407;26408;26409;26410;26411;26412 19888;19889;19890;19891;19892;19893;19894;19895 19888 8 564400000 489030000 421830000 427360000 94723000 293180000 735850000 570370000 TQTEEKERIARKVA LPSSSVNTPWHDRKATQTEEKERIARKVAE ATQTEEKERIARKVAEQIPNGSTLFIDIGT A T Q V A E 2 2 0 0 0 1 3 0 0 1 0 2 0 0 0 0 2 0 0 1 0 0 14 4 3 1 1657.9111 P0ACL0 P0ACL0 73 86 glpR Glycerol-3-phosphate regulon repressor yes yes 3;4 0.00019595 82.362 By MS/MS By MS/MS By matching By MS/MS 3 2 1 2 26439000 5497400 4984300 0 0 530790 15427000 0 0 4420 215 4847 26413;26414;26415;26416;26417;26418;26419;26420 19896;19897;19898 19898 3 39729000 29831000 0 0 8172000 21991000 0 0 TQTLSQLENSGAFIER ______________________________ QTLSQLENSGAFIERHIGPDAAQQQEMLNA M T Q E R H 1 1 1 0 0 2 2 1 0 1 2 0 0 1 0 2 2 0 0 0 0 0 16 0 2 1 1792.8955 P33195 P33195 2 17 gcvP Glycine dehydrogenase (decarboxylating) yes yes 2 3.0096E-17 104.87 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 21394000 6713600 4162500 0 0 4087400 6430600 0 0 4421 344 4848 26421;26422;26423;26424 19899;19900;19901 19901 3 6713600 4260700 0 0 4930600 7123700 0 0 TQVNQNITVTGYPGDKPVATMWE IGEVVKPATMSNNAETQVNQNITVTGYPGD VTGYPGDKPVATMWESKGKITYLKGEAMQY E T Q W E S 1 0 2 1 0 2 1 2 0 1 0 1 1 0 2 0 4 1 1 3 0 0 23 1 0 3 2548.2268 CON__P0C1U8 CON__P0C1U8 191 213 yes yes 2;3 1.1528E-99 169.02 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 2 3 3 164730000 11883000 3988400 637070 2458700 30590000 81056000 6552100 27567000 + 4422 11 4849;4850 26425;26426;26427;26428;26429;26430;26431;26432;26433;26434;26435;26436;26437;26438;26439 19902;19903;19904;19905;19906;19907;19908 19908 10 6 182580000 60823000 5413100 18641000 470960000 1228500000 50426000 158200000 TQVVVLGAGPAGYSAAFR ______________________________ VVLGAGPAGYSAAFRCADLGLETVIVERYN K T Q F R C 4 1 0 0 0 1 0 3 0 0 1 0 0 1 1 1 1 0 1 3 0 0 18 0 0 5 1762.9366 P0A9P0 P0A9P0 7 24 lpdA Dihydrolipoyl dehydrogenase yes yes 2 5.1772E-63 155.66 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50567000 9814700 10405000 0 0 14731000 15617000 0 0 4423 172 4851 26440;26441;26442;26443 19909;19910;19911;19912 19912 4 9814700 10650000 0 0 17770000 17300000 0 0 TRDNEIVAK AKTDSVANRRLAFARTRDNEIVAKLFNELG RLAFARTRDNEIVAKLFNELGPRFASRAGG R T R A K L 1 1 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 9 1 1 1 1044.5564 P0AG44 P0AG44 70 78 rplQ 50S ribosomal protein L17 yes yes 2 0.0054809 76.064 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 83382000 28700000 26114000 0 0 16695000 11873000 0 0 4424 257 4852 26444;26445;26446;26447 19913 19913 1 28700000 26730000 0 0 20139000 13153000 0 0 TRFIKPTRE PGSINQAHQPDEYLETRFIKPTRELITQVI PDEYLETRFIKPTRELITQVIHHFCWH___ E T R R E L 0 2 0 0 0 0 1 0 0 1 0 1 0 1 1 0 2 0 0 0 0 0 9 3 0 1 1146.6509 P23908 P23908 363 371 argE Acetylornithine deacetylase yes yes 3;4 0.010196 60.102 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 2 2 1336000000 51327000 80671000 208900000 274940000 47158000 54934000 267100000 350940000 4425 308 4853 26448;26449;26450;26451;26452;26453;26454;26455;26456;26457;26458;26459;26460;26461;26462 19914;19915;19916;19917;19918;19919;19920;19921 19916 5 769270000 1208400000 1775000000 2084500000 709930000 832610000 2055700000 2014000000 TRGFQSE ______________________________ ______________________________ E T R S E V 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 7 1 0 0 823.38243 P0A6Z3 P0A6Z3 6 12 htpG Chaperone protein HtpG yes yes 2 3.5374E-07 91.906 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75689000 0 0 15088000 18243000 0 0 19614000 22744000 4426 88 4854 26463;26464;26465;26466 19922 19922 0 0 0 128200000 138310000 0 0 150960000 130520000 TRKSLIAGHMTE LETPLRPPVHEMDNETRKSLIAGHMTEIMQ DNETRKSLIAGHMTEIMQLLNLDLADDSLM E T R T E I 1 1 0 0 0 0 1 1 1 1 1 1 1 0 0 1 2 0 0 0 0 0 12 2 0 1 1342.7027 P0A6T5 P0A6T5 35 46 folE GTP cyclohydrolase 1 yes yes 3 0.0018757 54.343 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 197460000 30564000 24044000 0 54470000 14934000 14287000 25588000 33572000 4427 81 4855 26467;26468;26469;26470;26471;26472;26473 19923;19924;19925 19923 3 469600000 366680000 0 412960000 229930000 216550000 196930000 192660000 TRLEQEIATYR MEQQNQEYKILLDVKTRLEQEIATYRRLLE LDVKTRLEQEIATYRRLLEGEDAHLSSSQF K T R Y R R 1 2 0 0 0 1 2 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 11 1 2 1 1378.7205 CON__P02533;CON__Q6IFX2;CON__A2A4G1;CON__P19012;CON__Q3ZAW8;CON__Q9Z2K1;CON__Q61782;CON__P35900;CON__P08779 CON__P02533 406 416 no no 2;3 8.3429E-06 107.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 72812000 13146000 11188000 0 0 15940000 32538000 0 0 + 4428 4;10 4856 26474;26475;26476;26477;26478;26479;26480;26481 19926;19927;19928;19929;19930 19927 5 13146000 11452000 0 0 19229000 36045000 0 0 TRPLEAFIQLLDVPDSAR WRWLTTWLVWRRGAKTRPLEAFIQLLDVPD LEAFIQLLDVPDSARQGYQ___________ K T R A R Q 2 2 0 2 0 1 1 0 0 1 3 0 0 1 2 1 1 0 0 1 0 0 18 1 1 4 2040.1004 P77309 P77309 272 289 yneJ Uncharacterized HTH-type transcriptional regulator YneJ yes yes 3 3.3279E-08 67.449 By MS/MS By MS/MS 2 2 16504000 0 0 0 0 4550000 11954000 0 0 4429 430 4857 26482;26483;26484;26485 19931;19932 19931 2 0 0 0 0 70051000 78629000 0 0 TRPSQDKDDEQE GNAPTIPPVLYGLNETRPSQDKDDEQEVFY LNETRPSQDKDDEQEVFYTTALAQDQADGY E T R Q E V 0 1 0 3 0 2 2 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 12 2 1 1 1446.6223 P0ACI0 P0ACI0 184 195 rob Right origin-binding protein yes yes 2 0.00084415 64.82 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 48540000 0 0 9256600 13839000 0 0 14360000 11085000 4430 211 4858 26486;26487;26488;26489 19933 19933 1 0 0 78652000 104920000 0 0 110520000 63615000 TSAAMLKDIGAQYIIIGHSE AQNVDLNLSGAFTGETSAAMLKDIGAQYII LKDIGAQYIIIGHSERRTYHKESDELIAKK E T S S E R 3 0 0 1 0 1 1 2 1 4 1 1 1 0 0 2 1 0 1 0 0 0 20 1 0 3 2117.0827 P0A858 P0A858 78 97 tpiA Triosephosphate isomerase yes yes 3 4.6071E-19 89.557 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 19671000 0 378030 0 0 5579800 7163900 0 6549400 4431 139 4859;4860 26490;26491;26492;26493;26494 19934;19935;19936 19935 131 3 0 5765000 0 0 85906000 108580000 0 37586000 TSAVQRMGFGNLNK QPPAVQFVPPLPEWKTSAVQRMGFGNLNKV KTSAVQRMGFGNLNKVVLCFDRVFWDPSVN K T S N K V 1 1 2 0 0 1 0 2 0 0 1 1 1 1 0 1 1 0 0 1 0 0 14 1 0 1 1521.7722 LSD1-FL-His LSD1-FL-His 650 663 yes yes 3 0.0064667 36.236 By MS/MS By matching By matching 1 1 1 8644100 0 5690900 0 0 1545600 1407700 0 0 4432 24 4861 26495;26496;26497 19937 19937 1 0 5825200 0 0 1864400 1559400 0 0 TSDIHETIIK QVELRSHIQFYDGIKTSDIHETIIKAAADL YDGIKTSDIHETIIKAAADLISRDAPDYQY K T S I K A 0 0 0 1 0 0 1 0 1 3 0 1 0 0 0 1 2 0 0 0 0 0 10 0 1 0 1155.6136 P00452;P00452-2 P00452 55 64 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2 0.00017068 95.358 By matching By matching By MS/MS 1 1 1 48948000 22087000 16641000 0 0 10220000 0 0 0 4433 26 4862 26498;26499;26500 19938 19938 1 22087000 17034000 0 0 12329000 0 0 0 TSENPLLALR ______________________________ ______________________________ M T S L R E 1 1 1 0 0 0 1 0 0 0 3 0 0 0 1 1 1 0 0 0 0 0 10 0 1 2 1112.619 P0A9J8 P0A9J8 2 11 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 5.9151E-174 228.39 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 821240000 246550000 233030000 0 0 136050000 205600000 0 0 4434 166 4863 26501;26502;26503;26504 19939;19940;19941;19942;19943;19944 19942 6 246550000 238530000 0 0 164120000 227760000 0 0 TSENPLLALRE ______________________________ ______________________________ M T S R E K 1 1 1 0 0 0 2 0 0 0 3 0 0 0 1 1 1 0 0 0 0 0 11 1 1 2 1241.6616 P0A9J8 P0A9J8 2 12 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 3.7888E-07 107.55 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 574930000 33379000 33780000 82906000 94501000 62669000 29016000 98402000 140270000 4435 166 4864 26505;26506;26507;26508;26509;26510;26511;26512 19945;19946;19947;19948;19949;19950;19951 19947 5 512860000 515150000 704440000 716460000 964840000 439790000 757320000 805000000 TSFTSVSR RSFSTASAITPSVSRTSFTSVSRSGGGGGG ITPSVSRTSFTSVSRSGGGGGGGFGRVSLA R T S S R S 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 3 2 0 0 1 0 0 8 0 0 0 883.43995 CON__P13647 CON__P13647 30 37 no no 2 0.0083334 55.37 By MS/MS By MS/MS By MS/MS 1 1 1 7310300 0 1915400 0 0 2922800 2472100 0 0 + 4436 13 4865 26513;26514;26515 19952 19952 1 0 1960600 0 0 3525800 2738600 0 0 TSHITVVVSDR IMPRAKGRADRILKRTSHITVVVSDR____ ILKRTSHITVVVSDR_______________ R T S D R - 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 2 2 0 0 3 0 0 11 0 0 0 1212.6463 P61175 P61175 100 110 rplV 50S ribosomal protein L22 yes yes 2 1.7529E-40 156.83 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76724000 17958000 15882000 0 0 25755000 17130000 0 0 4437 385 4866 26516;26517;26518;26519 19953;19954;19955;19956;19957 19956 5 17958000 16257000 0 0 31068000 18976000 0 0 TSLKDTTVGR ITEYEKDANGELVAKTSLKDTTVGRAILWM ELVAKTSLKDTTVGRAILWMIVPKGLPYSI K T S G R A 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 1 3 0 0 1 0 0 10 1 0 0 1076.5826 P0A8T7 P0A8T7 567 576 rpoC DNA-directed RNA polymerase subunit beta yes yes 2;3 0.0024949 49.715 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 14248000 6073000 5440700 0 0 0 2734100 0 0 4438 153 4867 26520;26521;26522;26523;26524 19958;19959;19960;19961;19962;19963 19961 6 6073000 5569200 0 0 0 3028800 0 0 TSLLDYIR RAPVVTIMGHVDHGKTSLLDYIRSTKVASG GHVDHGKTSLLDYIRSTKVASGEAGGITQH K T S I R S 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 1 1 0 1 0 0 0 8 0 0 0 979.53385 P0A705;P0A705-3;P0A705-2 P0A705 405 412 infB Translation initiation factor IF-2 yes no 2 4.0278E-05 112.17 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45579000 9146500 13901000 0 0 11667000 10864000 0 0 4439 90 4868 26525;26526;26527;26528 19964;19965;19966;19967 19964 4 9146500 14229000 0 0 14074000 12035000 0 0 TSLSTLLPAAIATQHDGLK IEANSISAVLELIRRTSLSTLLPAAIATQH TLLPAAIATQHDGLKAISLAPPLLERTAVL R T S L K A 3 0 0 1 0 1 0 1 1 1 4 1 0 0 1 2 3 0 0 0 0 0 19 0 0 4 1936.0629 P27111 P27111 234 252 cynR HTH-type transcriptional regulator CynR yes yes 3 1.6995E-12 86.479 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34878000 8316900 11182000 0 0 7117000 8262000 0 0 4440 319 4869 26529;26530;26531;26532 19968;19969;19970;19971 19971 4 8316900 11446000 0 0 8585300 9152500 0 0 TSMAGARYFAE KLKKPLYILATADEETSMAGARYFAETTAL ADEETSMAGARYFAETTALRPDCAIIGEPT E T S A E T 3 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 11 1 0 3 1202.539 P23908 P23908 146 156 argE Acetylornithine deacetylase yes yes 2 3.0952E-07 108.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 3 2 2 501730000 55278000 59254000 41748000 37640000 33592000 60211000 88908000 125100000 4441 308 4870;4871 26533;26534;26535;26536;26537;26538;26539;26540;26541;26542;26543;26544;26545;26546;26547;26548;26549;26550;26551 19972;19973;19974;19975;19976;19977;19978;19979;19980;19981;19982 19982 255 10 687480000 717140000 354720000 285370000 389790000 712580000 684250000 717920000 TSQNSELNNMQDLVEDYK IDSLKRYLDGLTAERTSQNSELNNMQDLVE NSELNNMQDLVEDYKKKYEDEINKRTAAEN R T S Y K K 0 0 3 2 0 2 2 0 0 0 2 1 1 0 0 2 1 0 1 1 0 0 18 0 2 0 2126.9426 CON__P35908v2;CON__P35908 CON__P35908v2 248 265 yes no 2 4.3371E-164 210.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 57025000 8546800 5885200 0 0 22107000 20486000 0 0 + 4442 16 4872 26552;26553;26554;26555 19983;19984;19985;19986 19985 4 8546800 6024100 0 0 26668000 22694000 0 0 TSQNSELNNMQDLVEDYKK IDSLKRYLDGLTAERTSQNSELNNMQDLVE SELNNMQDLVEDYKKKYEDEINKRTAAEND R T S K K K 0 0 3 2 0 2 2 0 0 0 2 2 1 0 0 2 1 0 1 1 0 0 19 1 2 0 2255.0376 CON__P35908v2;CON__P35908 CON__P35908v2 248 266 yes no 2;3 8.4462E-64 153.95 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 517270000 93338000 52274000 0 0 178680000 192970000 0 0 + 4443 16 4873;4874 26556;26557;26558;26559;26560;26561;26562;26563;26564;26565 19987;19988;19989;19990;19991;19992;19993;19994;19995;19996 19994 29 10 93338000 53508000 0 0 215550000 213770000 0 0 TSVLVAR GEHSLLVLAGAGSGKTSVLVARAGWLLARG LAGAGSGKTSVLVARAGWLLARGEASPEQI K T S A R A 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 2 0 0 7 0 0 1 744.44939 P15038 P15038 223 229 helD Helicase IV yes yes 2 8.4703E-07 117.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 70636000 19069000 18503000 0 0 16618000 16445000 0 0 4444 281 4875 26566;26567;26568;26569 19997;19998;19999;20000 19998 4 19069000 18940000 0 0 20046000 18218000 0 0 TTAENEFVMLK VEDFKNKYEDEINKRTTAENEFVMLKKDVD INKRTTAENEFVMLKKDVDAAYMNKVELEA R T T L K K 1 0 1 0 0 0 2 0 0 0 1 1 1 1 0 0 2 0 0 1 0 0 11 0 2 1 1281.6275 CON__P13647 CON__P13647 266 276 no no 2 2.0036E-08 115.7 By matching By MS/MS 1 1 25071000 0 0 0 0 11271000 13801000 0 0 + 4445 13 4876 26570;26571 20001 20001 16 1 0 0 0 0 13596000 15288000 0 0 TTISFYK NDALKAKMLAESEPRTTISFYKYFHIADPK MLAESEPRTTISFYKYFHIADPKATRDALY R T T Y K Y 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 2 0 1 0 0 0 7 0 0 0 858.44872 P24188 P24188 25 31 yceA UPF0176 protein YceA yes yes 2 0.015231 50.898 By MS/MS By MS/MS By matching By matching 1 1 1 1 14908000 4025400 5568200 0 0 2605700 2708700 0 0 4446 310 4877 26572;26573;26574;26575 20002 20002 1 4025400 5699700 0 0 3143300 3000700 0 0 TTIVSVR ______________________________ ______________________________ M T T V R R 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 2 0 0 7 0 0 0 774.45995 P0A7B8 P0A7B8 2 8 hslV ATP-dependent protease subunit HslV yes yes 2 8.8578E-25 148.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 119230000 34364000 32148000 0 0 26405000 26308000 0 0 4447 100 4878 26576;26577;26578;26579 20003;20004;20005;20006 20003 4 34364000 32907000 0 0 31853000 29144000 0 0 TTLAEVIAR HLHSMILWGPPGTGKTTLAEVIARYANADV PPGTGKTTLAEVIARYANADVERISAVTSG K T T A R Y 2 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 9 0 1 2 972.5604 P0AAZ4 P0AAZ4 64 72 rarA Replication-associated recombination protein A yes yes 2 0.00131 87.696 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 49264000 17233000 14024000 0 0 7929500 10078000 0 0 4448 189 4879 26580;26581;26582;26583 20007;20008;20009;20010 20007 4 17233000 14355000 0 0 9565400 11164000 0 0 TTLAPNTQTASPR VKGNQLLPVSLVKRKTTLAPNTQTASPRAL RKTTLAPNTQTASPRALADSLMQLARQVSR K T T P R A 2 1 1 0 0 1 0 0 0 0 1 0 0 0 2 1 4 0 0 0 0 0 13 0 0 4 1356.6997 B8LFD5;P03023 B8LFD5 331 343 lacI Lactose operon repressor yes no 2 2.5516E-51 140.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18702000 5232400 4982800 0 0 4543500 3943000 0 0 4449 0 4880 26584;26585;26586;26587 20011;20012;20013;20014 20012 3 5232400 5100400 0 0 5480900 4367900 0 0 TTLLTETLMR KQLVLNLVSSPGSGKTTLLTETLMRLKDSV PGSGKTTLLTETLMRLKDSVPCAVIEGDQQ K T T M R L 0 1 0 0 0 0 1 0 0 0 3 0 1 0 0 0 4 0 0 0 0 0 10 0 1 0 1177.6377 P0AAN3 P0AAN3 118 127 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 2 6.8163E-15 160.26 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 48303000 16745000 12309000 0 0 7261100 11988000 0 0 4450 187 4881 26588;26589;26590;26591 20015;20016;20017;20018 20015 4 16745000 12600000 0 0 8759100 13280000 0 0 TTLTAAITTVLAK PHVNVGTIGHVDHGKTTLTAAITTVLAKTY GKTTLTAAITTVLAKTYGGAARAFDQIDNA K T T A K T 3 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 5 0 0 1 0 0 13 0 0 3 1302.7759 P0CE48;P0CE47 P0CE48 26 38 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 5.8076E-46 155.11 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 138380000 33810000 34178000 0 0 35687000 34704000 0 0 4451 269 4882 26592;26593;26594;26595 20019;20020;20021 20020 3 33810000 34985000 0 0 43049000 38444000 0 0 TTLVSKALNHPNIRVLE RRILHAADATGREVETTLVSKALNHPNIRV LVSKALNHPNIRVLERSNAVDLIVSDKIGL E T T L E R 1 1 2 0 0 0 1 0 1 1 3 1 0 0 1 1 2 0 0 2 0 0 17 2 0 2 1904.0843 P10902 P10902 142 158 nadB L-aspartate oxidase yes yes 3 1.2376E-24 109.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 67012000 3562100 3859300 5987400 8912100 18506000 12975000 3739800 9470900 4452 274 4883 26596;26597;26598;26599;26600;26601;26602;26603 20022;20023;20024;20025;20026;20027;20028 20024 7 54731000 58855000 50874000 67568000 284920000 196650000 28783000 54352000 TTPSIIAYTQDGETLVGQPAK DGTTPRVLENAEGDRTTPSIIAYTQDGETL AYTQDGETLVGQPAKRQAVTNPQNTLFAIK R T T A K R 2 0 0 1 0 2 1 2 0 2 1 1 0 0 2 1 4 0 1 1 0 0 21 0 1 4 2189.1216 P0A6Y8 P0A6Y8 35 55 dnaK Chaperone protein DnaK yes yes 2;3 0 266.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 1084300000 181360000 236440000 0 0 347120000 319400000 0 0 4453 86 4884 26604;26605;26606;26607;26608;26609;26610;26611;26612 20029;20030;20031;20032;20033;20034;20035;20036 20035 8 181360000 242020000 0 0 418730000 353820000 0 0 TTPSIIAYTQDGETLVGQPAKR DGTTPRVLENAEGDRTTPSIIAYTQDGETL YTQDGETLVGQPAKRQAVTNPQNTLFAIKR R T T K R Q 2 1 0 1 0 2 1 2 0 2 1 1 0 0 2 1 4 0 1 1 0 0 22 1 1 4 2345.2227 P0A6Y8 P0A6Y8 35 56 dnaK Chaperone protein DnaK yes yes 2;3 1.2713E-173 242.26 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 1251300000 339960000 410370000 0 0 233180000 267830000 0 0 4454 86 4885 26613;26614;26615;26616;26617;26618;26619;26620;26621 20037;20038;20039;20040;20041;20042;20043;20044 20038 8 339960000 420060000 0 0 281290000 296690000 0 0 TTSILHLLAHKDPNEK MTRTNLITGFLGSGKTTSILHLLAHKDPNE TSILHLLAHKDPNEKWAVLVNEFGEVGIDG K T T E K W 1 0 1 1 0 0 1 0 2 1 3 2 0 0 1 1 2 0 0 0 0 0 16 1 1 2 1815.9843 P33030 P33030 16 31 yeiR Uncharacterized protein YeiR yes yes 3;4 1.4111E-19 111.03 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 207660000 37290000 67942000 0 0 52316000 50114000 0 0 4455 343 4886 26622;26623;26624;26625;26626;26627;26628;26629 20045;20046;20047;20048;20049;20050;20051;20052 20048 7 37290000 69546000 0 0 63109000 55515000 0 0 TTTQELLAQAEK ______________________________ MEKTTTQELLAQAEKICAQRNVRLTPQRLE K T T E K I 2 0 0 0 0 2 2 0 0 0 2 1 0 0 0 0 3 0 0 0 0 0 12 0 2 2 1331.6933 P0AC51 P0AC51 4 15 zur Zinc uptake regulation protein yes yes 2 1.3802E-69 174.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 151020000 47464000 37308000 0 0 29281000 36963000 0 0 4456 204 4887 26630;26631;26632;26633 20053;20054;20055;20056;20057 20055 5 47464000 38188000 0 0 35322000 40947000 0 0 TVAAEPIVQEAPAPRTE QSVAEEAVVAPVVEETVAAEPIVQEAPAPR AAEPIVQEAPAPRTELVKVPLPVVAQTAPE E T V T E L 4 1 0 0 0 1 3 0 0 1 0 0 0 0 3 0 2 0 0 2 0 0 17 1 2 7 1777.921 P21513 P21513 748 764 rne Ribonuclease E yes yes 2 1.0761E-30 126.1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 31560000 0 0 5766100 8254100 1946800 0 7661800 7931400 4457 297 4888 26634;26635;26636;26637;26638 20058;20059;20060;20061 20061 4 0 0 48994000 62579000 29973000 0 58967000 45517000 TVDALMR RTHLRLVDIVEPTEKTVDALMRLDLAAGVD DIVEPTEKTVDALMRLDLAAGVDVQISLG_ K T V M R L 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 7 0 0 1 804.41637 P0A7R5 P0A7R5 83 89 rpsJ 30S ribosomal protein S10 yes yes 1;2 7.9873E-10 126.24 By MS/MS By MS/MS By MS/MS By MS/MS 3 4 4 4 217380000 61067000 55726000 0 0 45080000 55509000 0 0 4458 120 4889;4890 26639;26640;26641;26642;26643;26644;26645;26646;26647;26648;26649;26650;26651;26652;26653 20062;20063;20064;20065;20066;20067;20068 20062 120 6 61067000 58497000 0 0 54678000 61848000 0 0 TVDDRPYGGGPGMLMMVQPLR IQSWSPRDFTHDRHRTVDDRPYGGGPGMLM YGGGPGMLMMVQPLRDAIHAAKAAAGEGAK R T V L R D 0 2 0 2 0 1 0 4 0 0 2 0 3 0 3 0 1 0 1 2 0 0 21 1 0 3 2289.1068 P0A873 P0A873 48 68 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2;3 4.4798E-53 141.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 339880000 79463000 97299000 0 0 76978000 86145000 0 0 4459 140 4891;4892 26654;26655;26656;26657;26658;26659;26660;26661;26662 20069;20070;20071;20072;20073;20074;20075;20076;20077;20078;20079 20076 133 11 79463000 99595000 0 0 92859000 95429000 0 0 TVDLTDKPS DMQETIDETLDFFLRTVDLTDKPS______ LDFFLRTVDLTDKPS_______________ R T V P S - 0 0 0 2 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 1 0 0 9 1 0 1 974.49204 P77398 P77398 652 660 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.0019374 93.429 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 12788000000 2970400000 4085900000 1892300 1930600 2948600000 2778900000 0 0 4460 432 4893 26663;26664;26665;26666;26667;26668 20080;20081;20082;20083 20080 4 2970400000 4182300000 16078000 14637000 3556900000 3078400000 0 0 TVEVKSRRVGGSTYQVP SELEAFEVALENVRPTVEVKSRRVGGSTYQ EVKSRRVGGSTYQVPVEVRPVRRNALAMRW P T V V P V 0 2 0 0 0 1 1 2 0 0 0 1 0 0 1 2 2 0 1 4 0 0 17 3 1 0 1862.001 P02359 P02359 72 88 rpsG 30S ribosomal protein S7 yes yes 3 0.015699 25.319 By MS/MS By MS/MS 1 1 3554800 0 0 0 0 2492500 1062300 0 0 4461 36 4894 26669;26670 20084 20084 1 0 0 0 0 3548600 1514300 0 0 TVFQQDFTDIEK QLAAAINRGDKTAVKTVFQQDFTDIEKRLL AVKTVFQQDFTDIEKRLLQSGEDYIAMLEE K T V E K R 0 0 0 2 0 2 1 0 0 1 0 1 0 2 0 0 2 0 0 1 0 0 12 0 1 0 1469.7038 P04993 P04993 384 395 recD RecBCD enzyme subunit RecD yes yes 2 0.010905 56.725 By MS/MS By MS/MS By MS/MS 1 1 1 29074000 5894100 0 0 0 12327000 10853000 0 0 4462 46 4895 26671;26672;26673 20085;20086 20086 2 5894100 0 0 0 14870000 12023000 0 0 TVFQQDFTDIEKR QLAAAINRGDKTAVKTVFQQDFTDIEKRLL VKTVFQQDFTDIEKRLLQSGEDYIAMLEEA K T V K R L 0 1 0 2 0 2 1 0 0 1 0 1 0 2 0 0 2 0 0 1 0 0 13 1 1 0 1625.8049 P04993 P04993 384 396 recD RecBCD enzyme subunit RecD yes yes 3 0.000189 64.224 By MS/MS By MS/MS By matching 1 1 1 18141000 0 14659000 0 0 3482300 0 0 0 4463 46 4896 26674;26675;26676 20087;20088 20088 2 0 15005000 0 0 4200700 0 0 0 TVGAGVVAK AMDDGLRFAIREGGRTVGAGVVAKVLS___ IREGGRTVGAGVVAKVLS____________ R T V A K V 2 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 3 0 0 9 0 0 2 800.4756 P0CE48;P0CE47 P0CE48 383 391 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 0.01134 56.721 By MS/MS By MS/MS By MS/MS 1 1 1 87574000 26531000 27689000 0 0 0 33355000 0 0 4464 269 4897 26677;26678;26679 20089;20090;20091 20091 2 26531000 28342000 0 0 0 36949000 0 0 TVGKLIAE KAIAQVGTISANSDETVGKLIAEAMDKVGK ISANSDETVGKLIAEAMDKVGKEGVITVED E T V A E A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 8 1 0 1 829.49092 P0A6F5 P0A6F5 157 164 groL 60 kDa chaperonin yes yes 1;2 7.6936E-11 101.25 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 2510900000 378100000 474610000 1057700000 43796000 192770000 187400000 79601000 96916000 4465 68 4898 26680;26681;26682;26683;26684;26685;26686;26687;26688;26689;26690;26691;26692;26693;26694;26695 20092;20093;20094;20095;20096;20097;20098;20099;20100;20101 20094 4 5809400000 7237800000 8987300000 332040000 2967800000 2840400000 612630000 556180000 TVGRILKMLE ITRQEIGQIVGCSRETVGRILKMLEDQNLI GCSRETVGRILKMLEDQNLISAHGKTIVVY E T V L E D 0 1 0 0 0 0 1 1 0 1 2 1 1 0 0 0 1 0 0 1 0 0 10 2 0 0 1158.6795 P0ACJ8 P0ACJ8 183 192 crp cAMP-activated global transcriptional regulator CRP yes yes 2;3 3.6812E-05 84.213 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 3 3 3 3 612100000 38136000 51043000 22516000 27829000 70278000 55000000 108920000 238380000 4466 213 4899;4900 26696;26697;26698;26699;26700;26701;26702;26703;26704;26705;26706;26707;26708;26709;26710;26711;26712;26713;26714;26715;26716;26717;26718;26719 20102;20103;20104;20105;20106;20107;20108;20109;20110;20111;20112;20113;20114;20115;20116;20117;20118;20119;20120;20121;20122;20123 20103 191 22 585950000 778410000 191320000 210990000 1082000000 833600000 838280000 1368000000 TVHGIGYTLGEK HVHHLRRKLGSDFIRTVHGIGYTLGEK___ FIRTVHGIGYTLGEK_______________ R T V E K - 0 0 0 0 0 0 1 3 1 1 1 1 0 0 0 0 2 0 1 1 0 0 12 0 1 0 1273.6667 P52076 P52076 208 219 qseB Transcriptional regulatory protein QseB yes yes 3 0.0015531 39.016 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25799000 6367300 8024700 0 0 6958600 4448800 0 0 4467 374 4901 26720;26721;26722;26723 20124;20125 20125 2 6367300 8214100 0 0 8394200 4928300 0 0 TVHSLTQALAK DNLHVAMVGDLKYGRTVHSLTQALAKFDGN KYGRTVHSLTQALAKFDGNRFYFIAPDALA R T V A K F 2 0 0 0 0 1 0 0 1 0 2 1 0 0 0 1 2 0 0 1 0 0 11 0 0 2 1167.6612 P0A786 P0A786 169 179 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 3 0.00060146 46.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36421000 10669000 9042000 0 0 7311600 9398200 0 0 4468 97 4902 26724;26725;26726;26727 20126;20127;20128;20129 20128 4 10669000 9255400 0 0 8820100 10411000 0 0 TVINFDNAIIAAGSR FTGANTLEVEGENGKTVINFDNAIIAAGSR TVINFDNAIIAAGSRPIQLPFIPHEDPRIW K T V S R P 3 1 2 1 0 0 0 1 0 3 0 0 0 1 0 1 1 0 0 1 0 0 15 0 0 3 1560.826 P0A9P0 P0A9P0 134 148 lpdA Dihydrolipoyl dehydrogenase yes yes 2 1.4679E-12 93.011 By matching By MS/MS By MS/MS 1 1 1 6193500 3366000 0 0 0 2827500 0 0 0 4469 172 4903 26728;26729;26730 20130;20131 20131 2 3366000 0 0 0 3410900 0 0 0 TVLGHIQRGGSP LAHFIEKETGRETRATVLGHIQRGGSPVPY TRATVLGHIQRGGSPVPYDRILASRMGAYA A T V S P V 0 1 0 0 0 1 0 3 1 1 1 0 0 0 1 1 1 0 0 1 0 0 12 1 0 0 1220.6626 P0A796 P0A796 246 257 pfkA ATP-dependent 6-phosphofructokinase isozyme 1 yes yes 3 0.0007547 49.5 By MS/MS 1 0 0 0 0 0 0 0 0 0 4470 98 4904 26731 20132 20132 1 0 0 0 0 0 0 0 0 TVMLESWR QRFFQVYDPAYYDSKTVMLESWRWLHSLHS PAYYDSKTVMLESWRWLHSLHSTLLSREVD K T V W R W 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 1 1 0 1 0 0 8 0 1 0 1020.5063 P33602 P33602 643 650 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.2314E-17 136.11 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 105260000 29087000 36454000 0 0 18006000 21714000 0 0 4471 345 4905 26732;26733;26734;26735 20133;20134;20135;20136;20137 20134 5 29087000 37315000 0 0 21721000 24054000 0 0 TVNMMELIR KGGKVGLFGGAGVGKTVNMMELIRNIAIEH GAGVGKTVNMMELIRNIAIEHSGYSVFAGV K T V I R N 0 1 1 0 0 0 1 0 0 1 1 0 2 0 0 0 1 0 0 1 0 0 9 0 1 0 1105.5624 P0ABB4 P0ABB4 157 165 atpD ATP synthase subunit beta yes yes 2 0.0045054 59.35 By MS/MS By MS/MS By MS/MS 1 1 1 23101000 8058200 0 0 0 6935800 8106900 0 0 4472 194 4906 26736;26737;26738 20138;20139;20140 20140 3 8058200 0 0 0 8366700 8980700 0 0 TVNQLVRKP ______________________________ ______________________________ A T V K P R 0 1 1 0 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 2 0 0 9 2 0 0 1053.6295 P0A7S3 P0A7S3 3 11 rpsL 30S ribosomal protein S12 yes yes 2 9.464E-05 96.253 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 22945000 888080 1065200 0 0 14448000 6543800 0 0 4473 122 4907 26739;26740;26741;26742;26743 20141;20142;20143 20143 3 5361000 6375100 0 0 20570000 9328200 0 0 TVPDNGNYEHDYEGADDMPSHIK CDPTVRHDMERFFLRTVPDNGNYEHDYEGA EHDYEGADDMPSHIKSSMLGTSLVLPVHKG R T V I K S 1 0 2 4 0 0 2 2 2 1 0 1 1 0 2 1 1 0 2 1 0 0 23 0 2 3 2603.0871 P0AF48 P0AF48 70 92 yjbQ UPF0047 protein YjbQ yes yes 3;4 1.273E-14 81.312 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 156380000 38460000 28387000 0 0 30314000 59223000 0 0 4474 243 4908 26744;26745;26746;26747;26748;26749;26750;26751 20144;20145;20146;20147;20148;20149;20150;20151 20151 8 38460000 29057000 0 0 36568000 65605000 0 0 TVPMFNEALAELNK IFGARNKVHIINLEKTVPMFNEALAELNKI KTVPMFNEALAELNKIASRKGKILFVGTKR K T V N K I 2 0 2 0 0 0 2 0 0 0 2 1 1 1 1 0 1 0 0 1 0 0 14 0 2 3 1575.7967 P0A7V0 P0A7V0 46 59 rpsB 30S ribosomal protein S2 yes yes 2 1.8877E-76 174.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 615300000 257760000 154860000 0 0 78875000 123800000 0 0 4475 128 4909 26752;26753;26754;26755 20152;20153;20154;20155;20156 20156 5 257760000 158520000 0 0 95148000 137140000 0 0 TVQTSKNPQVDIAE ______________________________ MTVQTSKNPQVDIAEDNAFFPSEYSLSQYT M T V A E D 1 0 1 1 0 2 1 0 0 1 0 1 0 0 1 1 2 0 0 2 0 0 14 1 0 2 1528.7733 P31658 P31658 2 15 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 1.0684E-16 101.95 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 62063000 6472400 5217900 9235600 9681100 5357200 4365200 10342000 11392000 4476 335 4910 26756;26757;26758;26759;26760;26761;26762;26763 20157;20158;20159;20160;20161;20162;20163;20164 20161 8 99447000 79574000 78474000 73398000 82480000 66161000 79592000 65376000 TVRGTAMNP VLGKAGAARWRGVRPTVRGTAMNPVDHPHG WRGVRPTVRGTAMNPVDHPHGGGEGRNFGK P T V N P V 1 1 1 0 0 0 0 1 0 0 0 0 1 0 1 0 2 0 0 1 0 0 9 1 0 1 945.4702 P60422 P60422 219 227 rplB 50S ribosomal protein L2 yes yes 2 0.0056086 84.227 By MS/MS By MS/MS By MS/MS 2 2 2 133680000 27128000 47039000 0 0 0 59510000 0 0 4477 379 4911;4912 26764;26765;26766;26767;26768;26769 20165;20166;20167 20166 301 2 153340000 281530000 0 0 0 84831000 0 0 TVSSHRLE ______________________________ ______________________________ M T V L E L 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 1 0 0 8 1 0 0 927.47739 P76104 P76104 2 9 ydcP Uncharacterized protease YdcP yes yes 2;3 0.0033509 73.665 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 52000000 0 0 9246400 12521000 0 0 13869000 16364000 4478 416 4913 26770;26771;26772;26773;26774;26775;26776;26777 20168;20169;20170 20170 3 0 0 78566000 94925000 0 0 106740000 93911000 TVTADIPIVGDAR ATVLHIDIDPTSISKTVTADIPIVGDARQV SKTVTADIPIVGDARQVLEQMLELLSQESA K T V A R Q 2 1 0 2 0 0 0 1 0 2 0 0 0 0 1 0 2 0 0 2 0 0 13 0 0 3 1326.7143 P00893 P00893 313 325 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 2 1.4076E-80 166.97 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 106840000 10381000 10898000 0 0 41033000 44523000 0 0 4479 29 4914 26778;26779;26780;26781;26782 20171;20172;20173 20171 3 10381000 11155000 0 0 49498000 49322000 0 0 TVTIASKAGDE LAAANARAEKINALETVTIASKAGDEGKLF NALETVTIASKAGDEGKLFGSIGTRDIADA E T V D E G 2 0 0 1 0 0 1 1 0 1 0 1 0 0 0 1 2 0 0 1 0 0 11 1 0 2 1090.5506 P0A7R1 P0A7R1 77 87 rplI 50S ribosomal protein L9 yes yes 2 0.00024741 87.308 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 184000000 6518600 7495700 25734000 27493000 18425000 10427000 35028000 52875000 4480 119 4915 26783;26784;26785;26786;26787;26788;26789;26790;26791;26792;26793;26794 20174;20175;20176;20177;20178;20179;20180;20181;20182 20176 9 76172000 91478000 218650000 208440000 62991000 44802000 269590000 303440000 TVVVDYAHTP PVCGRMEVFTAPGKPTVVVDYAHTPDALEK APGKPTVVVDYAHTPDALEKALQAARLHCA P T V T P D 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 2 0 1 3 0 0 10 0 0 1 1100.5502 P22188 P22188 353 362 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase yes yes 2 2.6621E-06 91.906 By MS/MS 1 0 0 0 0 0 0 0 0 0 4481 299 4916 26795 20183 20183 1 0 0 0 0 0 0 0 0 TVYDNVAIPLIIAGASGDDIR QIGMIFQDHHLLMDRTVYDNVAIPLIIAGA AIPLIIAGASGDDIRRRVSAALDKVGLLDK R T V I R R 3 1 1 3 0 0 0 2 0 4 1 0 0 0 1 1 1 0 1 2 0 0 21 0 0 4 2172.1426 P0A9R7 P0A9R7 95 115 ftsE Cell division ATP-binding protein FtsE yes yes 2 3.1146E-133 196.95 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 232260000 65279000 42008000 0 0 39064000 85911000 0 0 4482 174 4917 26796;26797;26798;26799 20184;20185;20186;20187 20184 4 65279000 42999000 0 0 47123000 95170000 0 0 TVYDNVAIPLIIAGASGDDIRR QIGMIFQDHHLLMDRTVYDNVAIPLIIAGA IPLIIAGASGDDIRRRVSAALDKVGLLDKA R T V R R R 3 2 1 3 0 0 0 2 0 4 1 0 0 0 1 1 1 0 1 2 0 0 22 1 0 4 2328.2438 P0A9R7 P0A9R7 95 116 ftsE Cell division ATP-binding protein FtsE yes yes 3 0.022254 17.146 By MS/MS By matching 1 1 73432000 40076000 33356000 0 0 0 0 0 0 4483 174 4918 26800;26801 20188 20188 1 40076000 34143000 0 0 0 0 0 0 TWTGQGR RPAKYSYVDENGETKTWTGQGRTPAVIKKA VDENGETKTWTGQGRTPAVIKKAMDEQGKS K T W G R T 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 2 1 0 0 0 0 7 0 0 0 804.38785 P0ACF8;P0ACG1 P0ACF8 108 114 hns;stpA DNA-binding protein H-NS;DNA-binding protein StpA yes no 2 9.3918E-09 126.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 301110000 115090000 130730000 0 0 26786000 28504000 0 0 4484 210 4919 26802;26803;26804;26805 20189;20190;20191;20192;20193 20190 4 115090000 133810000 0 0 32312000 31576000 0 0 TYLVTLESPVADDTAEQFAK QWSHRITSPRHHCEKTYLVTLESPVADDTA LESPVADDTAEQFAKGVQLHNEKDLTKPAV K T Y A K G 3 0 0 2 0 1 2 0 0 0 2 1 0 1 1 1 3 0 1 2 0 0 20 0 2 4 2197.079 P0AA43 P0AA43 131 150 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 0 335.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1956300000 514410000 523240000 0 0 334450000 584210000 0 0 4485 183 4920 26806;26807;26808;26809 20194;20195;20196;20197;20198;20199 20199 6 514410000 535590000 0 0 403450000 647180000 0 0 TYQQQVAK GKAVALKEAMEPEFKTYQQQVAKNAKAMVE AMEPEFKTYQQQVAKNAKAMVEVFLERGYK K T Y A K N 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 8 0 0 1 964.49779 P0A825 P0A825 286 293 glyA Serine hydroxymethyltransferase yes yes 2 0.0021433 86.113 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6134200 2199800 2136500 0 0 947070 850870 0 0 4486 136 4921 26810;26811;26812;26813 20200;20201 20200 2 2199800 2186900 0 0 1142400 942580 0 0 TYVLLPSFEK KAVTVQPPRPKPWEKTYVLLPSFEKVKGDK KPWEKTYVLLPSFEKVKGDKVLYAHASRIL K T Y E K V 0 0 0 0 0 0 1 0 0 0 2 1 0 1 1 1 1 0 1 1 0 0 10 0 1 1 1195.6489 Q46861 Q46861 290 299 ygiQ UPF0313 protein YgiQ yes yes 2 0.00042617 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36002000 10257000 9125800 0 0 5972900 10647000 0 0 4487 441 4922 26814;26815;26816;26817 20202;20203;20204;20205 20204 4 10257000 9341200 0 0 7205200 11794000 0 0 TYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNE LLEQIRHIDGDFEFETYYSLSCHNCPDVVQ RIKHTAIDGGTFQNEITDRNVMGVPAVFVN E T Y N E I 2 1 4 2 2 2 1 2 2 2 4 1 1 1 2 3 3 0 2 3 0 0 40 2 0 4 4562.1781 P35340 P35340 123 162 ahpF Alkyl hydroperoxide reductase subunit F yes yes 5 0.022174 3.4706 By MS/MS 1 8111500 0 0 0 0 8111500 0 0 0 4488 348 4923 26818 20206 20206 1 0 0 0 0 124880000 0 0 0 VAAAVALTR LDKLFPVSDEINWQKVAAAVALTRRISVIS EINWQKVAAAVALTRRISVISGGPGTGKTT K V A T R R 4 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 9 0 0 4 870.5287 P04993 P04993 156 164 recD RecBCD enzyme subunit RecD yes yes 2 0.00018317 101.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44021000 11763000 10426000 0 0 7416600 14416000 0 0 4489 46 4924 26819;26820;26821;26822 20207;20208;20209;20210 20209 4 11763000 10672000 0 0 8946700 15969000 0 0 VAALAEAR WDWQPEPVNEALNARVAALAEARLSDAYRI NEALNARVAALAEARLSDAYRITDKQERYA R V A A R L 4 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 8 0 1 4 799.4552 P05055 P05055 246 253 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0019114 89.142 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 47326000 10383000 12714000 0 0 13018000 11210000 0 0 4490 48 4925 26823;26824;26825;26826;26827 20211;20212;20213;20214 20213 4 10383000 13014000 0 0 15704000 12624000 0 0 VAALEGDVLGSYQHGAR VALVAKIGENINIRRVAALEGDVLGSYQHG ALEGDVLGSYQHGARIGVLVAAKGADEELV R V A A R I 3 1 0 1 0 1 1 3 1 0 2 0 0 0 0 1 0 0 1 2 0 0 17 0 1 3 1741.8747 P0A6P1 P0A6P1 135 151 tsf Elongation factor Ts yes yes 3 1.5733E-16 95.428 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39663000 9044000 9815400 0 0 8553700 12250000 0 0 4491 77 4926 26828;26829;26830;26831 20215;20216;20217;20218 20216 4 9044000 10047000 0 0 10318000 13570000 0 0 VAALNGLNR VNTTFNYPTMAEAYRVAALNGLNRLF____ MAEAYRVAALNGLNRLF_____________ R V A N R L 2 1 2 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 0 2 926.52976 P27306 P27306 456 464 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 2.0091E-05 107.43 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21565000 6193500 6853800 0 0 3422000 5095200 0 0 4492 323 4927 26832;26833;26834;26835 20219;20220;20221;20222 20220 4 6193500 7015600 0 0 4128000 5644300 0 0 VAAMSKQS VGEGIEKVETDFAAEVAAMSKQS_______ ETDFAAEVAAMSKQS_______________ E V A Q S - 2 0 0 0 0 1 0 0 0 0 0 1 1 0 0 2 0 0 0 1 0 0 8 1 0 2 820.41129 P0A6P1 P0A6P1 276 283 tsf Elongation factor Ts yes yes 2 0.014751 58.815 By MS/MS By MS/MS By MS/MS 1 1 1 5396800 0 0 0 2615000 0 0 0 2781800 4493 77 4928 26836;26837;26838 20223;20224 20223 2 0 0 0 19826000 0 0 0 15964000 VAAQPAGLSGPAE EAGPGTAGGSENGSEVAAQPAGLSGPAEVG SEVAAQPAGLSGPAEVGPGAVGERTPRKKE E V A A E V 4 0 0 0 0 1 1 2 0 0 1 0 0 0 2 1 0 0 0 1 0 0 13 0 0 6 1166.5932 LSD1-FL-His LSD1-FL-His 39 51 yes yes 2 1.7639E-14 158.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 2 2 17341000000 2247800000 1956500000 2415700000 2780900000 1030200000 916580000 2921700000 3072000000 4494 24 4929 26839;26840;26841;26842;26843;26844;26845;26846;26847;26848;26849;26850 20225;20226;20227;20228;20229;20230;20231;20232;20233;20234;20235;20236;20237 20237 11 34536000000 29836000000 20526000000 21083000000 15860000000 13892000000 22486000000 17630000000 VAAQPAGLSGPAEVGPGAVGE EAGPGTAGGSENGSEVAAQPAGLSGPAEVG GLSGPAEVGPGAVGERTPRKKEPPRASPPG E V A G E R 5 0 0 0 0 1 2 5 0 0 1 0 0 0 3 1 0 0 0 3 0 0 21 0 1 8 1832.9268 LSD1-FL-His LSD1-FL-His 39 59 yes yes 2;3 1.963E-167 198.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 16 12 12 12 9 6 16 14 65087000000 8675800000 10462000000 12514000000 14469000000 5217600000 117500000 13474000000 156360000 4495 24 4930 26851;26852;26853;26854;26855;26856;26857;26858;26859;26860;26861;26862;26863;26864;26865;26866;26867;26868;26869;26870;26871;26872;26873;26874;26875;26876;26877;26878;26879;26880;26881;26882;26883;26884;26885;26886;26887;26888;26889;26890;26891;26892;26893;26894;26895;26896;26897;26898;26899;26900;26901;26902;26903;26904;26905;26906;26907;26908;26909;26910;26911;26912;26913;26914;26915;26916;26917;26918;26919;26920;26921;26922;26923;26924;26925;26926;26927;26928;26929;26930;26931;26932;26933;26934;26935;26936;26937;26938;26939;26940;26941;26942;26943;26944;26945;26946;26947 20238;20239;20240;20241;20242;20243;20244;20245;20246;20247;20248;20249;20250;20251;20252;20253;20254;20255;20256;20257;20258;20259;20260;20261;20262;20263;20264;20265;20266;20267;20268;20269;20270;20271;20272;20273;20274;20275;20276;20277;20278;20279;20280;20281;20282;20283;20284;20285;20286;20287;20288;20289;20290;20291;20292;20293;20294;20295;20296;20297;20298;20299;20300;20301;20302;20303;20304;20305;20306;20307;20308;20309;20310;20311;20312;20313;20314;20315;20316;20317;20318;20319;20320;20321;20322;20323;20324;20325 20321 85 133290000000 159550000000 106330000000 109700000000 80330000000 1780800000 103700000000 897350000 VADGATVVSTSTR IEIPGCSLCMGNQARVADGATVVSTSTRNF ARVADGATVVSTSTRNFPNRLGTGANVFLA R V A T R N 2 1 0 1 0 0 0 1 0 0 0 0 0 0 0 2 3 0 0 3 0 0 13 0 0 2 1262.6466 P36683 P36683 779 791 acnB Aconitate hydratase B yes yes 2 0.0019792 72.006 By matching By MS/MS By matching 1 1 1 9000000 2721100 3960000 0 0 2318900 0 0 0 4496 350 4931 26948;26949;26950 20326 20326 1 2721100 4053400 0 0 2797300 0 0 0 VADLLSK IDNIQKTVAEYYKIKVADLLSKRRSRSVAR VAEYYKIKVADLLSKRRSRSVARPRQMAMA K V A S K R 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 7 0 0 1 744.43815 P03004 P03004 391 397 dnaA Chromosomal replication initiator protein DnaA yes yes 2 0.0042069 66.799 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21688000 5899500 5128000 0 0 4929300 5731600 0 0 4497 40 4932 26951;26952;26953;26954 20327;20328;20329 20328 3 5899500 5249000 0 0 5946300 6349300 0 0 VAEFFGK ILVGGQTRMPMVQKKVAEFFGKEPRKDVNP RMPMVQKKVAEFFGKEPRKDVNPDEAVAIG K V A G K E 1 0 0 0 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 1 0 0 7 0 1 1 796.41194 P0A6Y8 P0A6Y8 353 359 dnaK Chaperone protein DnaK yes yes 2 0.0031128 74.439 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 558680000 132820000 125600000 0 0 128260000 172000000 0 0 4498 86 4933 26955;26956;26957;26958 20330;20331;20332 20330 3 132820000 128570000 0 0 154720000 190540000 0 0 VAEFFGKEPR ILVGGQTRMPMVQKKVAEFFGKEPRKDVNP MVQKKVAEFFGKEPRKDVNPDEAVAIGAAV K V A P R K 1 1 0 0 0 0 2 1 0 0 0 1 0 2 1 0 0 0 0 1 0 0 10 1 2 2 1178.6084 P0A6Y8 P0A6Y8 353 362 dnaK Chaperone protein DnaK yes yes 2;3 6.4092E-10 138.08 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 766840000 247480000 163620000 0 0 171390000 184350000 0 0 4499 86 4934 26959;26960;26961;26962;26963;26964;26965;26966 20333;20334;20335;20336;20337;20338;20339;20340 20338 8 247480000 167480000 0 0 206750000 204220000 0 0 VAEQGYREP MSFDSLGLSPDILRAVAEQGYREPTPIQQQ PDILRAVAEQGYREPTPIQQQAIPAVLEGR A V A E P T 1 1 0 0 0 1 2 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 9 1 2 1 1047.4985 P25888 P25888 16 24 rhlE ATP-dependent RNA helicase RhlE yes yes 2 7.4538E-33 136.16 By MS/MS By MS/MS By MS/MS 2 1 1 50475000 1701100 1162700 0 0 0 47611000 0 0 4500 318 4935 26967;26968;26969;26970 20341;20342 20341 2 10269000 6958700 0 0 0 67869000 0 0 VAEQLCR VDLSSLHQQNAVPPRVAEQLCRLLRLAIIF QQNAVPPRVAEQLCRLLRLAIIFASRRRDD R V A C R L 1 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 1 1 874.43309 P25552 P25552 423 429 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 7.1228E-07 119.06 By MS/MS By MS/MS By matching 1 1 1 29805000 10421000 11701000 0 0 0 7682800 0 0 4501 316 4936 26971;26972;26973 20343;20344 20343 2 10421000 11977000 0 0 0 8510800 0 0 VAETPESVIAR LRGKVVRTEDEMGLRVAETPESVIARTRKE MGLRVAETPESVIARTRKENDLGVGYYQP_ R V A A R T 2 1 0 0 0 0 2 0 0 1 0 0 0 0 1 1 1 0 0 2 0 0 11 0 2 3 1170.6245 P0AEI1 P0AEI1 450 460 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase yes yes 2 0.00037648 61.65 By MS/MS 1 0 0 0 0 0 0 0 0 0 4502 237 4937 26974 20345 20345 1 0 0 0 0 0 0 0 0 VAEVFPDMIQR SAPIARLGDWTFDERVAEVFPDMIQRSVPG FDERVAEVFPDMIQRSVPGYSNIISMIGML R V A Q R S 1 1 0 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 0 2 0 0 11 0 1 2 1303.6595 P76290 P76290 24 34 cmoA tRNA (cmo5U34)-methyltransferase yes yes 2 0.0014615 59.426 By MS/MS By MS/MS By matching By matching 1 1 1 1 26829000 9221000 7511100 0 0 5591100 4505500 0 0 4503 421 4938 26975;26976;26977;26978 20346;20347 20346 0 9221000 7688400 0 0 6744500 4991100 0 0 VAFQAVIK KQAKGYYGARSRVYRVAFQAVIKAGQYAYR ARSRVYRVAFQAVIKAGQYAYRDRRQRKRQ R V A I K A 2 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 2 0 0 8 0 0 2 874.52764 P0A7L3 P0A7L3 34 41 rplT 50S ribosomal protein L20 yes yes 2 1.0599E-07 122.79 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 260380000 70446000 51659000 0 0 62742000 75535000 0 0 4504 111 4939 26979;26980;26981;26982 20348;20349;20350;20351 20350 4 70446000 52878000 0 0 75685000 83676000 0 0 VAFTALVEK EIDRKILADIAVFDKVAFTALVEKAKAALA IAVFDKVAFTALVEKAKAALA_________ K V A E K A 2 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 9 0 1 2 976.55933 P0A7L3 P0A7L3 104 112 rplT 50S ribosomal protein L20 yes yes 2 1.332E-09 123.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 251970000 52114000 53612000 0 0 71506000 74744000 0 0 4505 111 4940 26983;26984;26985;26986 20352;20353;20354;20355 20352 4 52114000 54877000 0 0 86258000 82799000 0 0 VAGEAGAAAPAAKQE VGDKVSTGSLIMVFEVAGEAGAAAPAAKQE VAGEAGAAAPAAKQEAAPAAAPAPAAGVKE E V A Q E A 7 0 0 0 0 1 2 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 15 1 1 8 1339.6732 P06959 P06959 179 193 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 6.0865E-07 79.82 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 15270000 1315200 1366200 2030100 1381500 1987800 2049900 2349200 2790000 4506 53 4941 26987;26988;26989;26990;26991;26992;26993;26994 20356;20357;20358 20357 2 20208000 20835000 17249000 10474000 30604000 31069000 18080000 16012000 VAGVVEAPVQVAEPQPE AAAIEPVVSAPVVEEVAGVVEAPVQVAEPQ GVVEAPVQVAEPQPEVVETTHPEVIAAAVT E V A P E V 3 0 0 0 0 2 3 1 0 0 0 0 0 0 3 0 0 0 0 5 0 0 17 0 2 6 1717.8887 P21513 P21513 892 908 rne Ribonuclease E yes yes 2 0.0010541 56.205 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15644000 0 0 2449500 3980300 0 0 4113700 5100200 4507 297 4942 26995;26996;26997;26998 20359;20360;20361 20360 3 0 0 20813000 30177000 0 0 31660000 29269000 VAHILYHNPR LLNHNHLRIITNSLRVAHILYHNPRFEVMV TNSLRVAHILYHNPRFEVMVPGGTLRSHNS R V A P R F 1 1 1 0 0 0 0 0 2 1 1 0 0 0 1 0 0 0 1 1 0 0 10 0 0 2 1218.6622 P32144 P32144 130 139 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 3 6.5838E-11 119.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34956000 6625700 13032000 0 0 7225700 8072600 0 0 4508 339 4943 26999;27000;27001;27002 20362;20363;20364;20365 20363 4 6625700 13340000 0 0 8716400 8942700 0 0 VAIAGAGGR ______________________________ HDANIRVAIAGAGGRMGRQLIQAALALEGV R V A G R M 3 1 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 1 0 0 9 0 0 3 770.43989 P04036 P04036 8 16 dapB 4-hydroxy-tetrahydrodipicolinate reductase yes yes 2 0.0046734 58.819 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18858000 6156400 4775100 0 0 4410100 3516700 0 0 4509 43 4944 27003;27004;27005;27006 20366;20367;20368 20367 3 6156400 4887800 0 0 5319900 3895700 0 0 VAITIAR ______________________________ NVATPDARVAITIARFNNFINDSLLEGAID R V A A R F 2 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 7 0 0 2 742.47012 P61714 P61714 15 21 ribE 6,7-dimethyl-8-ribityllumazine synthase yes yes 2 0.012974 52.636 By MS/MS By MS/MS By MS/MS 1 1 1 10257000 0 4848600 0 0 2562800 2846100 0 0 4510 387 4945 27007;27008;27009 20369;20370;20371 20371 3 0 4963000 0 0 3091500 3152900 0 0 VAKDLVVSLAYQVR ______________________________ KVAKDLVVSLAYQVRTEDGVLVDESPVSAP K V A V R T 2 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 1 4 0 0 14 1 0 2 1559.9035 P0A9K9 P0A9K9 3 16 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 0.00014935 65.472 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41821000 14452000 12496000 0 0 6639000 8234700 0 0 4511 169 4946 27010;27011;27012;27013 20372;20373;20374;20375 20372 4 14452000 12791000 0 0 8008600 9122300 0 0 VALADKYFAK ______________________________ REVKRVALADKYFAKRAELKAIISDVNASD R V A A K R 3 0 0 1 0 0 0 0 0 0 1 2 0 1 0 0 0 0 1 1 0 0 10 1 0 3 1124.623 P0AG59 P0AG59 14 23 rpsN 30S ribosomal protein S14 yes yes 2;3 3.9041E-20 145.72 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 268340000 83289000 65056000 0 0 54150000 65849000 0 0 4512 260 4947 27014;27015;27016;27017;27018;27019;27020;27021 20376;20377;20378;20379;20380;20381;20382;20383 20380 8 83289000 66591000 0 0 65321000 72946000 0 0 VALRQSVE ARLAADDFRLKYENEVALRQSVEADINGLR RLKYENEVALRQSVEADINGLRRVLDELTL E V A V E A 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 8 1 0 1 900.50288 CON__P13645 CON__P13645 242 249 yes yes 2 0.003281 85.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27807000 14302000 6479200 7026100 0 0 0 0 0 + 4513 12 4948 27022;27023;27024;27025 20384;20385;20386;20387 20386 4 219750000 98808000 59699000 0 0 0 0 0 VALSSVAQGAR VIGIDNEELTRYLSRVALSSVAQGARQMGY YLSRVALSSVAQGARQMGYQAAKLLHRLLD R V A A R Q 3 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 2 0 0 11 0 0 3 1057.588 P0ACI3 P0ACI3 230 240 xylR Xylose operon regulatory protein yes yes 2 1.523E-23 140.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 37410000 10778000 10517000 0 0 8197700 7917400 0 0 4514 212 4949 27026;27027;27028;27029 20388;20389;20390;20391 20389 4 10778000 10765000 0 0 9888900 8770800 0 0 VALVDGQR MKRMLINATQQEELRVALVDGQRLYDLDIE TQQEELRVALVDGQRLYDLDIESPGHEQKK R V A Q R L 1 1 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 2 0 0 8 0 0 1 856.47667 P21513 P21513 16 23 rne Ribonuclease E yes yes 2 0.00379 67.032 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 42096000 8003600 17284000 0 0 8213600 8594300 0 0 4515 297 4950 27030;27031;27032;27033;27034 20392;20393;20394;20395;20396 20396 5 8003600 17692000 0 0 9908100 9520500 0 0 VANLEFNQFHPTALYHPQAR SSGDGIAMAWRAGCRVANLEFNQFHPTALY FNQFHPTALYHPQARNFLLTEALRGEGAYL R V A A R N 3 1 2 0 0 2 1 0 2 0 2 0 0 2 2 0 1 0 1 1 0 0 20 0 1 5 2352.1763 P10902 P10902 235 254 nadB L-aspartate oxidase yes yes 3;4 5.4467E-54 149.73 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 528250000 134970000 149830000 0 0 128090000 115370000 0 0 4516 274 4951 27035;27036;27037;27038;27039;27040;27041 20397;20398;20399;20400;20401;20402 20400 6 134970000 153370000 0 0 154520000 127800000 0 0 VANLGSLGDQVNVK ______________________________ KVANLGSLGDQVNVKAGYARNFLVPQGKAV K V A V K A 1 0 2 1 0 1 0 2 0 0 2 1 0 0 0 1 0 0 0 3 0 0 14 0 0 1 1412.7623 P0A7R1 P0A7R1 9 22 rplI 50S ribosomal protein L9 yes yes 2 1.3427E-39 149.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 60912000 17460000 13853000 0 0 14079000 15520000 0 0 4517 119 4952 27042;27043;27044;27045 20403;20404;20405;20406 20403 4 17460000 14180000 0 0 16984000 17192000 0 0 VAPIPAKR ______________________________ ______________________________ M V A K R G 2 1 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 8 1 0 4 850.53887 P16528 P16528 2 9 iclR Acetate operon repressor yes yes 2 0.0020405 88.734 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31562000 9275700 11578000 0 0 4603100 6105900 0 0 4518 285 4953 27046;27047;27048;27049 20407;20408;20409;20410 20407 4 9275700 11851000 0 0 5552800 6764000 0 0 VAQQLAGK KVEAAMAELNYIPNRVAQQLAGKQSLLIGV LNYIPNRVAQQLAGKQSLLIGVATSSLALH R V A G K Q 2 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 8 0 0 2 813.47085 B8LFD5;P03023 B8LFD5 55 62 lacI Lactose operon repressor yes no 2 0.0025053 81.381 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 11005000 3560200 4475100 0 0 1292800 1677300 0 0 4519 0 4954 27050;27051;27052;27053 20411;20412;20413;20414 20413 4 3560200 4580700 0 0 1559500 1858000 0 0 VAQSVPTKAVVE SADYPQGRWLREAWEVAQSVPTKAVVEAGF AWEVAQSVPTKAVVEAGFKGVEIREELTRR E V A V E A 2 0 0 0 0 1 1 0 0 0 0 1 0 0 1 1 1 0 0 4 0 0 12 1 0 3 1226.6871 P06961 P06961 369 380 cca Multifunctional CCA protein;CCA-adding enzyme;2-nucleotidase;2,3-cyclic phosphodiesterase;Phosphatase yes yes 2 1.1565E-05 71.451 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 29740000 3828800 3276400 0 17142000 3048000 2444300 0 0 4520 54 4955 27054;27055;27056;27057;27058 20415;20416;20417;20418 20415 4 58828000 49966000 0 129970000 46927000 37048000 0 0 VARSGVVGLSRGDKIMR DAFLASIRDVAKIVEVARSGVVGLSRGDKI RSGVVGLSRGDKIMR_______________ E V A M R - 1 3 0 1 0 0 0 3 0 1 1 1 1 0 0 2 0 0 0 3 0 0 17 3 0 1 1800.0152 P00894 P00894 147 163 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 4;5 0.0010593 34.485 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 1 1 63678000 4812700 2342900 11331000 16103000 0 3939900 12350000 12799000 4521 30 4956;4957 27059;27060;27061;27062;27063;27064;27065;27066;27067;27068 20419;20420;20421;20422;20423;20424;20425 20425 63 6 73946000 35730000 96278000 122080000 0 59714000 95052000 73449000 VASGGELSR RVTTNPGQPMQPIAKVASGGELSRIALAIQ MQPIAKVASGGELSRIALAIQVITARKMET K V A S R I 1 1 0 0 0 0 1 2 0 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 1 1 874.45084 P05824 P05824 430 438 recN DNA repair protein RecN yes yes 2 0.0040372 60.828 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 31846000 10238000 12322000 0 0 4644000 4641600 0 0 4522 49 4958 27069;27070;27071;27072;27073 20426;20427;20428;20429;20430 20427 5 13500000 12613000 0 0 5602100 5141800 0 0 VASKANDAAGDGTTTATVLAQAIITE LEDKFENMGAQMVKEVASKANDAAGDGTTT GTTTATVLAQAIITEGLKAVAAGMNPMDLK E V A T E G 7 0 1 2 0 1 1 2 0 2 1 1 0 0 0 1 5 0 0 2 0 0 26 1 0 7 2488.2657 P0A6F5 P0A6F5 77 102 groL 60 kDa chaperonin yes yes 3 9.6846E-99 159.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 647800000 1686600 1852100 1741700 1393400 295070000 344400000 1656900 0 4523 68 4959 27074;27075;27076;27077;27078;27079;27080;27081 20431;20432 20432 2 25914000 28245000 14799000 10564000 4533800000 5219900000 12752000 0 VASLLSHK GVIFLTDIAGAPPYRVASLLSHKHSRCEVI AGAPPYRVASLLSHKHSRCEVISGVTLPLI R V A H K H 1 0 0 0 0 0 0 0 1 0 2 1 0 0 0 2 0 0 0 1 0 0 8 0 0 1 853.50215 P36881 P36881 75 82 yadI Putative phosphotransferase enzyme IIA component YadI yes yes 2 0.0011227 92.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12161000 0 8252800 0 0 0 3908300 0 0 4524 351 4960 27082;27083;27084;27085 20433;20434;20435;20436 20435 4 0 8447600 0 0 0 4329600 0 0 VASPAIVEAK SAASQPAAPVTKEVRVASPAIVEAKPVKTI TKEVRVASPAIVEAKPVKTIKDKVRAMREL R V A A K P 3 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 2 0 0 10 0 1 4 983.56515 P0AFY8 P0AFY8 51 60 seqA Negative modulator of initiation of replication yes yes 2 0.00075034 74.173 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 41540000 9285400 10049000 0 0 11358000 10847000 0 0 4525 252 4961 27086;27087;27088;27089;27090;27091 20437;20438 20437 2 9285400 13114000 0 0 14162000 12016000 0 0 VASPAIVEAKPVK SAASQPAAPVTKEVRVASPAIVEAKPVKTI VRVASPAIVEAKPVKTIKDKVRAMRELLLS R V A V K T 3 0 0 0 0 0 1 0 0 1 0 2 0 0 2 1 0 0 0 3 0 0 13 1 1 5 1307.7813 P0AFY8 P0AFY8 51 63 seqA Negative modulator of initiation of replication yes yes 2;3 1.1719E-05 71.888 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 90604000 28416000 24004000 0 0 19390000 18793000 0 0 4526 252 4962 27092;27093;27094;27095;27096;27097;27098 20439;20440;20441;20442;20443;20444 20442 6 28416000 24571000 0 0 23390000 20818000 0 0 VASTLAMAISK TADELATLFGTTSRKVASTLAMAISKGRLI TSRKVASTLAMAISKGRLIRVNQGGKFRYC K V A S K G 3 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 1 0 0 1 0 0 11 0 0 3 1090.6056 P76066 P76066 127 137 ydaW Putative uncharacterized protein YdaW yes yes 2 0.0051989 34.931 By MS/MS 1 0 0 0 0 0 0 0 0 0 4527 415 4963 27099 20445 20445 320 32;67 0 0 0 0 0 0 0 0 0 VATISGLMTKFE LLPLYHLHAAGFEFEVATISGLMTKFEYWA EFEVATISGLMTKFEYWAMPHKDEKVMPFF E V A F E Y 1 0 0 0 0 0 1 1 0 1 1 1 1 1 0 1 2 0 0 1 0 0 12 1 0 1 1295.6795 P31658 P31658 94 105 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 3.4725E-10 96.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 105240000 16142000 11236000 7370500 8840100 14085000 23474000 8323200 15766000 4528 335 4964;4965 27100;27101;27102;27103;27104;27105;27106;27107;27108;27109;27110;27111;27112;27113;27114;27115 20446;20447;20448;20449;20450;20451;20452;20453;20454 20454 272 8 70730000 44216000 62626000 67022000 133210000 189500000 64057000 90481000 VATLEDATEMVNLYR PTPRKIYADKLEQEKVATLEDATEMVNLYR VATLEDATEMVNLYRDALDAGDCVVAEWRP K V A Y R D 2 1 1 1 0 0 2 0 0 0 2 0 1 0 0 0 2 0 1 2 0 0 15 0 2 2 1723.8451 P0AFG3 P0AFG3 496 510 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 5.3862E-216 240.8 By matching By MS/MS By MS/MS By MS/MS 2 2 2 1 205850000 62737000 42910000 0 0 55621000 44581000 0 0 4529 246 4966;4967 27116;27117;27118;27119;27120;27121;27122 20455;20456;20457;20458 20457 223 4 62737000 43923000 0 0 67095000 49386000 0 0 VATNLAR YGPEHVSTGASNDIKVATNLARNMVTQWGF TGASNDIKVATNLARNMVTQWGFSEKLGPL K V A A R N 2 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 7 0 0 2 743.42899 P0AAI3 P0AAI3 495 501 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 2 0.0033718 60.294 By MS/MS By MS/MS 1 1 4394900 4394900 0 0 0 0 0 0 0 4530 185 4968 27123;27124 20459;20460 20460 2 4394900 0 0 0 0 0 0 0 VATVSLPR IMLIKLSSPATLNSRVATVSLPRSCAAAGT PATLNSRVATVSLPRSCAAAGTECLISGWG R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 0 2 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 1.5073E-11 127.84 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 3 3 2 3 1 1 11300000000 3707600000 3720100000 0 0 1856400000 2007200000 5323700 3677600 + 4531 3 4969 27125;27126;27127;27128;27129;27130;27131;27132;27133;27134;27135;27136;27137 20461;20462;20463;20464;20465;20466 20462 6 3758700000 3811300000 0 0 2278700000 2223700000 40973000 21105000 VAVFTQGANAEAAK RGATVLPHGTGRSVRVAVFTQGANAEAAKA RVAVFTQGANAEAAKAAGAELVGMEDLADQ R V A A K A 5 0 1 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 14 0 1 5 1375.7096 P0A7L0 P0A7L0 75 88 rplA 50S ribosomal protein L1 yes yes 2 1.667E-76 175.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 108760000 27256000 22695000 0 0 26121000 32684000 0 0 4532 110 4970 27138;27139;27140;27141 20467;20468;20469;20470 20470 4 27256000 23231000 0 0 31510000 36206000 0 0 VAVLSVTEGEDKPLK NLVCPASFDLGEKHKVAVLSVTEGEDKPLK VAVLSVTEGEDKPLKYPHMFAAASLMLLNK K V A L K Y 1 0 0 1 0 0 2 1 0 0 2 2 0 0 1 1 1 0 0 3 0 0 15 1 2 2 1583.877 P0AAN3 P0AAN3 210 224 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 0.0013059 48.823 By matching By MS/MS By MS/MS By matching 1 1 1 1 22945000 7227800 5606800 0 0 3743300 6367400 0 0 4533 187 4971 27142;27143;27144;27145 20471;20472 20471 2 7227800 5739200 0 0 4515600 7053600 0 0 VAWVGLTE FDPKVIPSIAYTEPEVAWVGLTEKEAKEKG IAYTEPEVAWVGLTEKEAKEKGISYETATF E V A T E K 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 1 0 2 0 0 8 0 0 1 873.45962 P0A9P0 P0A9P0 357 364 lpdA Dihydrolipoyl dehydrogenase yes yes 1 0.015912 43 By MS/MS By matching By matching 1 1 1 2486900 0 0 893320 1139600 0 0 453940 0 4534 172 4972 27146;27147;27148 20473 20473 0 0 0 7590400 8639900 0 0 3493600 0 VAWVGLTEKE FDPKVIPSIAYTEPEVAWVGLTEKEAKEKG YTEPEVAWVGLTEKEAKEKGISYETATFPW E V A K E A 1 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 1 1 0 2 0 0 10 1 1 1 1130.5972 P0A9P0 P0A9P0 357 366 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.0074877 56.729 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 54100000 1428200 1832700 13165000 13898000 2114500 3352500 7916600 10392000 4535 172 4973 27149;27150;27151;27152;27153;27154;27155;27156 20474;20475;20476 20475 3 21943000 27948000 111860000 105370000 32554000 50812000 60928000 59639000 VCARQIDAVLKTQGAAAFE IGETEAENEAGKTEEVCARQIDAVLKTQGA QIDAVLKTQGAAAFEGAVIAYEPVWAIGTG E V C F E G 5 1 0 1 1 2 1 1 0 1 1 1 0 1 0 0 1 0 0 2 0 0 19 2 0 5 2047.0521 P0A858 P0A858 142 160 tpiA Triosephosphate isomerase yes yes 3 6.1257E-07 70.96 By MS/MS By MS/MS 1 1 37986000 0 0 0 0 15465000 22521000 0 0 4536 139 4974 27157;27158 20477;20478 20477 2 0 0 0 0 238100000 341330000 0 0 VDAGKME ALELAEQREKPTWLEVDAGKMEGTFKRKPE REKPTWLEVDAGKMEGTFKRKPERSDLSAD E V D M E G 1 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 7 1 0 1 748.34254 P0A7V8 P0A7V8 173 179 rpsD 30S ribosomal protein S4 yes yes 2 0.0086263 72.138 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 43184000 10333000 19143000 0 0 5171000 8536700 0 0 4537 130 4975 27159;27160;27161;27162;27163 20479 20479 0 158760000 291930000 0 0 74305000 129390000 0 0 VDALALITHR ASDMVRVDVLINGERVDALALITHRDNSQN INGERVDALALITHRDNSQNRGRELVEKMK R V D H R D 2 1 0 1 0 0 0 0 1 1 2 0 0 0 0 0 1 0 0 1 0 0 10 0 0 2 1107.64 P60785 P60785 492 501 lepA Elongation factor 4 yes yes 2 1.9786E-06 82.749 By MS/MS By MS/MS By MS/MS 1 1 1 10462000 0 0 0 0 4265300 6196800 0 0 4538 384 4976 27164;27165;27166 20480;20481;20482 20480 3 0 0 0 0 5145200 6864600 0 0 VDALMDEINFMK DVDAAYMNKVELEAKVDALMDEINFMKMFF EAKVDALMDEINFMKMFFDAELSQMQTHVS K V D M K M 1 0 1 2 0 0 1 0 0 1 1 1 2 1 0 0 0 0 0 1 0 0 12 0 1 1 1424.668 CON__P13647 CON__P13647 293 304 no no 2 0.00023133 70.808 By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 33120000 4679900 9328400 0 0 14336000 4776200 0 0 + 4539 13 4977;4978;4979 27167;27168;27169;27170;27171 20483;20484;20485 20484 17;18 3 4679900 9548600 0 0 17293000 5291000 0 0 VDDALYR AHHEGNESIDELFKRVDDALYRAKNDGRNR SIDELFKRVDDALYRAKNDGRNRVLAA___ R V D Y R A 1 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 7 0 0 1 850.41848 P77302 P77302 392 398 ydaM Probable diguanylate cyclase YdaM yes yes 2 0.0016497 100.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 23076000 6609900 5831600 0 0 5460300 5174200 0 0 4540 429 4980 27172;27173;27174;27175 20486;20487;20488;20489 20487 3 6609900 5969300 0 0 6586800 5731900 0 0 VDDKVPLFAVVSR KAENKRQLQIAMGLKVDDKVPLFAVVSRLT LKVDDKVPLFAVVSRLTSQKGLDLVLEALP K V D S R L 1 1 0 2 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 4 0 0 13 1 0 2 1443.8086 P0A6U8 P0A6U8 288 300 glgA Glycogen synthase yes yes 3 5.156E-09 106.32 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 85714000 25839000 23496000 0 0 17548000 18831000 0 0 4541 83 4981 27176;27177;27178;27179 20490;20491;20492;20493 20492 4 25839000 24050000 0 0 21168000 20861000 0 0 VDDLELTVRSA VKEEKPEFDPILLRPVDDLELTVRSANCLK LLRPVDDLELTVRSANCLKAEAIHYIGDLV P V D S A N 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 11 1 1 0 1216.6299 P0A7Z4 P0A7Z4 257 267 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 0.0095107 55.567 By MS/MS 1 966020 0 0 0 0 0 966020 0 0 4542 135 4982 27180 20494 20494 1 0 0 0 0 0 1377100 0 0 VDEAGFEAAMEEQR PVDLTADVCRERNIKVDEAGFEAAMEEQRR KVDEAGFEAAMEEQRRRAREASGFGADYNA K V D Q R R 3 1 0 1 0 1 4 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 14 0 4 3 1580.6777 P00957 P00957 420 433 alaS Alanine--tRNA ligase yes yes 2 5.0516E-09 74.611 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15750000 3285700 3963300 0 0 3417500 5083700 0 0 4543 33 4983 27181;27182;27183;27184 20495;20496;20497;20498 20498 0 3285700 4056800 0 0 4122600 5631600 0 0 VDESLEK YLTEFDGKPFQSVSKVDESLEKLADEVDES KPFQSVSKVDESLEKLADEVDESAKEAEKA K V D E K L 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 7 0 2 0 818.40216 P0A6Z3 P0A6Z3 486 492 htpG Chaperone protein HtpG yes yes 2 5.2576E-07 105.39 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 56666000 17227000 20299000 0 0 10726000 8415300 0 0 4544 88 4984 27185;27186;27187;27188 20499;20500;20501 20501 2 17227000 20778000 0 0 12938000 9322300 0 0 VDGEKTFE LGGGTFDISIIEIDEVDGEKTFEVLATNGD SIIEIDEVDGEKTFEVLATNGDTHLGGEDF E V D F E V 0 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 8 1 1 0 923.42363 P0A6Y8 P0A6Y8 210 217 dnaK Chaperone protein DnaK yes yes 2 0.0055197 91.783 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 3802600000 287000000 265350000 611490000 636290000 148090000 148800000 739920000 965630000 4545 86 4985 27189;27190;27191;27192;27193;27194;27195;27196;27197 20502;20503;20504;20505 20505 4 4407500000 4046700000 5195800000 4824100000 2279900000 2255300000 5694600000 5541600000 VDGHLLDLPR QNGGDRQLIHSEHGKVDGHLLDLPRRNLAE SEHGKVDGHLLDLPRRNLAELPASAAHSHQ K V D P R R 0 1 0 2 0 0 0 1 1 0 3 0 0 0 1 0 0 0 0 1 0 0 10 0 0 1 1133.6193 P33030 P33030 186 195 yeiR Uncharacterized protein YeiR yes yes 2;3 1.8899E-05 105.4 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 210280000 88737000 47093000 0 0 25567000 48885000 0 0 4546 343 4986 27198;27199;27200;27201;27202;27203;27204 20506;20507;20508;20509;20510;20511 20509 5 88737000 48205000 0 0 30842000 54154000 0 0 VDHPHGGGEGRNFGKHP WRGVRPTVRGTAMNPVDHPHGGGEGRNFGK HPHGGGEGRNFGKHPVTPWGVQTKGKKTRS P V D H P V 0 1 1 1 0 0 1 5 3 0 0 1 0 1 2 0 0 0 0 1 0 0 17 2 1 1 1796.8455 P60422 P60422 228 244 rplB 50S ribosomal protein L2 yes yes 4 0.01248 21.534 By MS/MS By MS/MS By MS/MS 1 1 1 70851000 14671000 15685000 0 0 0 40496000 0 0 4547 379 4987 27205;27206;27207 20512 20512 1 88564000 93872000 0 0 0 57726000 0 0 VDLINTR IGCEYASIFRGMDVKVDLINTRDRLLAFLD IFRGMDVKVDLINTRDRLLAFLDQEMSDSL K V D T R D 0 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 7 0 0 0 829.46577 P27306 P27306 202 208 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 5.2122E-35 162.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 195060000 60696000 46771000 0 0 43192000 44401000 0 0 4548 323 4988 27208;27209;27210;27211;27212;27213;27214 20513;20514;20515;20516 20514 4 68322000 57436000 0 0 53542000 49187000 0 0 VDLLNQEIEFLK DVDNAYMIKVELQSKVDLLNQEIEFLKVLY QSKVDLLNQEIEFLKVLYDAEISQIHQSVT K V D L K V 0 0 1 1 0 1 2 0 0 1 3 1 0 1 0 0 0 0 0 1 0 0 12 0 2 0 1459.7922 CON__P35908v2;CON__P35908 CON__P35908v2 303 314 yes no 2 7.8143E-101 229.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1066700000 156840000 226250000 0 0 280840000 402810000 0 0 + 4549 16 4989 27215;27216;27217;27218 20517;20518;20519;20520;20521 20519 5 156840000 231590000 0 0 338780000 446220000 0 0 VDLSSLHQQNA QKKLLATLLLNQTNPVDLSSLHQQNAVPPR QTNPVDLSSLHQQNAVPPRVAEQLCRLLRL P V D N A V 1 0 1 1 0 2 0 0 1 0 2 0 0 0 0 2 0 0 0 1 0 0 11 0 0 0 1210.5942 P25552 P25552 408 418 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 0.00068819 76.827 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 47849000 1923000 18858000 0 0 16067000 11000000 0 0 4550 316 4990 27219;27220;27221;27222;27223 20522 20522 1 11608000 32472000 0 0 22875000 15681000 0 0 VDLSTFSDEEVMR FIQRAYDLGADVRQKVDLSTFSDEEVMRLA QKVDLSTFSDEEVMRLAENLRKGMPIATPV K V D M R L 0 1 0 2 0 0 2 0 0 0 1 0 1 1 0 2 1 0 0 2 0 0 13 0 2 0 1526.6923 P0A8V2 P0A8V2 1159 1171 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0038438 39.918 By MS/MS 1 0 0 0 0 0 0 0 0 0 4551 154 4991 27224 20523 20523 1 0 0 0 0 0 0 0 0 VDPEIQNVK EVSVNQSLLQPLNVKVDPEIQNVKAQEREQ QPLNVKVDPEIQNVKAQEREQIKTLNNKFA K V D V K A 0 0 1 1 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 9 0 1 1 1040.5502 CON__P35908v2;CON__P35908 CON__P35908v2 167 175 no no 2 2.8778E-36 153.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 567940000 86159000 62730000 0 0 213330000 205720000 0 0 + 4552 16 4992 27225;27226;27227;27228 20524;20525;20526;20527 20525 4 86159000 64211000 0 0 257340000 227900000 0 0 VDQLSNDVNAMR KIDQLSSDVQTLNAKVDQLSNDVNAMRSDV NAKVDQLSNDVNAMRSDVQAAKDDAARANQ K V D M R S 1 1 2 2 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 2 0 0 12 0 0 1 1360.6405 P69776 P69776 41 52 lpp Major outer membrane lipoprotein Lpp yes yes 2 1.1019E-84 188.04 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 75844000 16178000 12601000 0 0 19942000 27124000 0 0 4553 404 4993;4994 27229;27230;27231;27232;27233;27234;27235 20528;20529;20530;20531;20532;20533 20528 316 6 16178000 12898000 0 0 24056000 30047000 0 0 VDQVLDAVGISR QAMHYIRNHACKGIKVDQVLDAVGISRSNL GIKVDQVLDAVGISRSNLEKRFKEEVGETI K V D S R S 1 1 0 2 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 3 0 0 12 0 0 1 1270.6881 P0ACI3 P0ACI3 304 315 xylR Xylose operon regulatory protein yes yes 2 6.3294E-05 73.951 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32970000 6870600 9706600 0 0 7448300 8944900 0 0 4554 212 4995 27236;27237;27238;27239 20534;20535;20536;20537 20537 4 6870600 9935700 0 0 8984900 9908900 0 0 VDRQGRIRLSIKE DYLQMGQEVPVKVLEVDRQGRIRLSIKEAT LEVDRQGRIRLSIKEATEQSQPAAAPEAPA E V D K E A 0 3 0 1 0 1 1 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 13 4 0 0 1568.9111 P05055 P05055 679 691 pnp Polyribonucleotide nucleotidyltransferase yes yes 4 0.015115 19.74 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 1 69808000 8062900 13913000 4941400 8554500 8612600 12147000 3623600 9952300 4555 48 4996 27240;27241;27242;27243;27244;27245;27246;27247 20538 20538 1 123880000 212180000 41986000 64857000 132600000 184110000 27888000 57115000 VDSASEFK REASGFGADYNAMIRVDSASEFKGYDHLEL DYNAMIRVDSASEFKGYDHLELNGKVTALF R V D F K G 1 0 0 1 0 0 1 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 8 0 1 1 881.41306 P00957 P00957 452 459 alaS Alanine--tRNA ligase yes yes 2 0.020008 46.426 By matching By matching By matching By MS/MS 1 1 1 1 11473000 2700800 2586400 0 0 3107900 3077900 0 0 4556 33 4997 27248;27249;27250;27251 20539 20539 1 2700800 2647400 0 0 3749100 3409700 0 0 VDSVSLGEIER SNIHILRLMREQGVKVDSVSLGEIERALAA QGVKVDSVSLGEIERALAAGYNPQTHPDDI K V D E R A 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 2 0 0 0 2 0 0 11 0 2 0 1202.6143 P00861 P00861 72 82 lysA Diaminopimelate decarboxylase yes yes 2 3.0773E-11 117.7 By MS/MS By MS/MS By matching By matching 1 1 1 1 86160000 22002000 21771000 0 0 16902000 25484000 0 0 4557 28 4998 27252;27253;27254;27255 20540;20541 20540 2 22002000 22285000 0 0 20389000 28231000 0 0 VDVTGTSK VGQSISVELFADVKKVDVTGTSKGKGFAGT LFADVKKVDVTGTSKGKGFAGTVKRWNFRT K V D S K G 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 2 0 0 2 0 0 8 0 0 0 805.41815 P60438 P60438 107 114 rplC 50S ribosomal protein L3 yes yes 2 1.4436E-07 95.531 By MS/MS By MS/MS By MS/MS 1 1 1 10013000 4201700 4396900 0 0 0 1414500 0 0 4558 380 4999 27256;27257;27258 20542 20542 0 4201700 4500700 0 0 0 1567000 0 0 VEDALHATR VGAATEVEMKEKKARVEDALHATRAAVEEG KEKKARVEDALHATRAAVEEGVVAGGGVAL R V E T R A 2 1 0 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1 2 1010.5145 P0A6F5 P0A6F5 396 404 groL 60 kDa chaperonin yes yes 2 1.0561E-36 159.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 742920000 190500000 227310000 0 0 163480000 161630000 0 0 4559 68 5000 27259;27260;27261;27262 20543;20544;20545 20544 2 190500000 232680000 0 0 197210000 179050000 0 0 VEDDHVVVDGNHMLA LAETDQGPVPVEITAVEDDHVVVDGNHMLA VEDDHVVVDGNHMLAGQNLKFNVEVVAIRE A V E L A G 1 0 1 3 0 0 1 1 2 0 1 0 1 0 0 0 0 0 0 4 0 0 15 0 1 0 1648.7515 P0A9K9 P0A9K9 112 126 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 6.203E-70 207.95 By MS/MS By MS/MS By MS/MS By MS/MS 4 5 5 4 8303100000 697980000 962130000 0 0 4000300000 2642700000 0 0 4560 169 5001;5002 27263;27264;27265;27266;27267;27268;27269;27270;27271;27272;27273;27274;27275;27276;27277;27278;27279;27280 20546;20547;20548;20549;20550;20551;20552;20553;20554;20555;20556;20557;20558;20559 20557 159 12 4213400000 5740600000 0 0 5695200000 3767200000 0 0 VEDLFIIATADR GISLHGARITTIGERVEDLFIIATADRRAL GERVEDLFIIATADRRALNNELQQEVHQRL R V E D R R 2 1 0 2 0 0 1 0 0 2 1 0 0 1 0 0 1 0 0 1 0 0 12 0 1 2 1361.7191 P27249 P27249 854 865 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2 8.3644E-10 113.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 61093000 14398000 11572000 0 0 18045000 17078000 0 0 4561 320 5003 27281;27282;27283;27284 20560;20561;20562;20563;20564 20563 5 14398000 11845000 0 0 21768000 18919000 0 0 VEDLFIIATADRR GISLHGARITTIGERVEDLFIIATADRRAL ERVEDLFIIATADRRALNNELQQEVHQRLT R V E R R A 2 2 0 2 0 0 1 0 0 2 1 0 0 1 0 0 1 0 0 1 0 0 13 1 1 2 1517.8202 P27249 P27249 854 866 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 6.5552E-27 115.78 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 85930000 28316000 24273000 0 0 14883000 18459000 0 0 4562 320 5004 27285;27286;27287;27288;27289;27290;27291 20565;20566;20567;20568;20569;20570;20571;20572 20566 8 28316000 24846000 0 0 17953000 20448000 0 0 VEGAAPAAAPAKQE VGDKVKTGSLIMIFEVEGAAPAAAPAKQEA EVEGAAPAAAPAKQEAAAPAPAAKAEAPAA E V E Q E A 6 0 0 0 0 1 2 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 14 1 1 8 1308.6674 P06959 P06959 280 293 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.00099959 58.274 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24905000 0 1816400 6283200 4857200 0 1771900 0 10176000 4563 53 5005 27292;27293;27294;27295;27296;27297 20573;20574;20575 20573 3 0 27701000 53387000 36825000 0 26856000 0 58397000 VEGDTLPSSK SLFKAFGRTLRQAIRVEGDTLPSSKGVL__ RQAIRVEGDTLPSSKGVL____________ R V E S K G 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1 1 1031.5135 P06987 P06987 343 352 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 4.4127E-07 111.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 805060000 218060000 237410000 0 0 176950000 172640000 0 0 4564 55 5006 27298;27299;27300;27301 20576;20577;20578;20579;20580 20578 5 218060000 243010000 0 0 213450000 191250000 0 0 VEGGVVDLNTLK KAAITAEIRLSDLAKVEGGVVDLNTLKAAN LAKVEGGVVDLNTLKAANIIGIQIEFAKVI K V E L K A 0 0 1 1 0 0 1 2 0 0 2 1 0 0 0 0 1 0 0 3 0 0 12 0 1 0 1242.682 P02413 P02413 85 96 rplO 50S ribosomal protein L15 yes yes 2 9.3389E-119 205.18 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 8303800000 2641800000 1789400000 0 0 1729300000 2143300000 0 0 4565 37 5007 27302;27303;27304;27305;27306 20581;20582;20583;20584;20585;20586 20581 6 2652400000 1831700000 0 0 2086100000 2374300000 0 0 VEHIQILACGTSYNSGMVSR DLSELGPNADELLSKVEHIQILACGTSYNS ILACGTSYNSGMVSRYWFESLAGIPCDVEI K V E S R Y 1 1 1 0 1 1 1 2 1 2 1 0 1 0 0 3 1 0 1 2 0 0 20 0 1 1 2221.062 P17169 P17169 293 312 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 1.1799E-12 104.17 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 3 2 326090000 77284000 45785000 0 1761500 90698000 110560000 0 0 4566 288 5008;5009 27307;27308;27309;27310;27311;27312;27313;27314;27315;27316 20587;20588;20589;20590;20591;20592;20593;20594;20595;20596 20593 249 10 77284000 46866000 0 13355000 109410000 122480000 0 0 VEIDVLDKNNRLAE AGTHAPGMSQRRMLEVEIDVLDKNNRLAER EVEIDVLDKNNRLAERNRARFAARKQLVLN E V E A E R 1 1 2 2 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 2 0 0 14 2 1 1 1626.8577 P0AAN3 P0AAN3 80 93 hypB Hydrogenase isoenzymes nickel incorporation protein HypB yes yes 3 0.0012114 41.092 By matching By matching By MS/MS 1 1 1 6083500 0 0 3461300 1319900 0 0 0 1302300 4567 187 5010 27317;27318;27319 20597 20597 1 0 0 29410000 10007000 0 0 0 7473500 VEIPIDAPGIDALLR ______________________________ VEIPIDAPGIDALLRRSFESDAEAKLVHDL R V E L R R 2 1 0 2 0 0 1 1 0 3 2 0 0 0 2 0 0 0 0 1 0 0 15 0 1 4 1590.8981 P63417 P63417 5 19 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 2 7.061E-12 100.93 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 291550000 75960000 78040000 0 0 75483000 62067000 0 0 4568 394 5011 27320;27321;27322;27323 20598;20599;20600;20601 20601 4 75960000 79882000 0 0 91056000 68757000 0 0 VEITAVEDDHVVVDGNHMLA VGMRFLAETDQGPVPVEITAVEDDHVVVDG VEDDHVVVDGNHMLAGQNLKFNVEVVAIRE P V E L A G 2 0 1 3 0 0 2 1 2 1 1 0 1 0 0 0 1 0 0 5 0 0 20 0 2 1 2162.0314 P0A9K9 P0A9K9 107 126 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 3 1.5331E-08 68.187 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2 75874000 504340 517460 524160 1038600 36401000 36889000 0 0 4569 169 5012;5013 27324;27325;27326;27327;27328;27329;27330 20602;20603 20602 159 2 3044500 3097000 4453700 7874500 51824000 52585000 0 0 VEKPIVE EVYPEVELQGLEAIEVEKPIVEVTDADVDG LQGLEAIEVEKPIVEVTDADVDGMLDTLRK E V E V E V 0 0 0 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 7 1 1 1 812.46437 P0A850 P0A850 125 131 tig Trigger factor yes yes 2 0.0094629 91.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 130220000 16199000 13601000 25517000 0 4736000 5840100 25619000 38713000 4570 137 5014 27331;27332;27333;27334;27335;27336;27337 20604;20605 20605 1 248890000 207420000 216810000 0 72914000 88516000 197170000 222170000 VELIATLDDSAKSA MKTQLKAYLEKLTKPVELIATLDDSAKSAE PVELIATLDDSAKSAEIKELLAEIAELSDK P V E S A E 3 0 0 2 0 0 1 0 0 1 2 1 0 0 0 2 1 0 0 1 0 0 14 1 1 2 1431.7457 P35340 P35340 21 34 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 3.2395E-38 141.73 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 266570000 34203000 34167000 0 0 126520000 71683000 0 0 4571 348 5015 27338;27339;27340;27341 20606;20607;20608 20607 3 206470000 204490000 0 0 180120000 102180000 0 0 VELQALTTSDFER PSDLIPELQGRLPIRVELQALTTSDFERIL IRVELQALTTSDFERILTEPNASITVQYKA R V E E R I 1 1 0 1 0 1 2 0 0 0 2 0 0 1 0 1 2 0 0 1 0 0 13 0 2 1 1507.7518 P0A6H5 P0A6H5 330 342 hslU ATP-dependent protease ATPase subunit HslU yes yes 2 2.1878E-11 116.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31864000 10680000 8961600 0 0 5982400 6239300 0 0 4572 71 5016 27342;27343;27344;27345 20609;20610;20611;20612 20610 4 10680000 9173100 0 0 7216600 6911800 0 0 VENALAALR MNQTLLSSFGTPFERVENALAALREGRGVM GTPFERVENALAALREGRGVMVLDDEDREN R V E L R E 3 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1 3 955.54508 P0A7J0 P0A7J0 16 24 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase yes yes 2 2.414E-37 161.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 640630000 140520000 132130000 30815000 26851000 145320000 122360000 18902000 23738000 4573 105 5017 27346;27347;27348;27349;27350;27351;27352;27353 20613;20614;20615;20616 20614 4 140520000 135250000 261830000 203570000 175290000 135550000 145470000 136230000 VENIDIGGPTMVRSAA FAQTVAREGCSLEDAVENIDIGGPTMVRSA ENIDIGGPTMVRSAAKNHKDVAIVVKSSDY A V E A A K 2 1 1 1 0 0 1 2 0 2 0 0 1 0 1 1 1 0 0 2 0 0 16 1 1 2 1628.8192 P15639 P15639 123 138 purH Bifunctional purine biosynthesis protein PurH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 2 0.00013963 41.704 By matching By MS/MS 1 1 1700100 0 493220 0 0 0 1206800 0 0 4574 282 5018 27354;27355 20617 20617 0 0 2951900 0 0 0 1720300 0 0 VEQEYGKPGEK YVPGWDCHGLPIELKVEQEYGKPGEKFTAA IELKVEQEYGKPGEKFTAAEFRAKCREYAA K V E E K F 0 0 0 0 0 1 3 2 0 0 0 2 0 0 1 0 0 0 1 1 0 0 11 1 3 1 1262.6143 P00956 P00956 106 116 ileS Isoleucine--tRNA ligase yes yes 2;3 0.0088964 56.563 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 15481000 8337300 1591900 0 0 3038200 2514100 0 0 4575 32 5019 27356;27357;27358;27359;27360;27361;27362 20618;20619;20620;20621 20620 4 8337300 1629500 0 0 3665000 2785000 0 0 VEQMQATPAR WHASTAAQEMPVMSKVEQMQATPARGEPDK PVMSKVEQMQATPARGEPDKLAIEARKTGF K V E A R G 2 1 0 0 0 2 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 10 0 1 3 1129.555 P37127 P37127 184 193 aegA Protein AegA yes yes 2 0.0044731 54.066 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 10233000 4396300 3034300 0 0 1148700 1653400 0 0 4576 355 5020 27363;27364;27365;27366 20622 20622 1 4396300 3105900 0 0 1385700 1831600 0 0 VEQRNLP TLTNFHFTHYENGHAVEQRNLPDVASLYAV THYENGHAVEQRNLPDVASLYAVMQEQFGL A V E L P D 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 7 1 1 0 854.46102 P77567 P77567 231 237 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2 0.00079907 79.454 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 21476000 1986200 2219000 1387900 0 0 15883000 0 0 4577 436 5021 27367;27368;27369;27370 20623 20623 1 11990000 13280000 11793000 0 0 22641000 0 0 VERIVAARGLE ALQKANEKFERRFREVERIVAARGLEMTGV RFREVERIVAARGLEMTGVDLETMEEVWQQ E V E L E M 2 2 0 0 0 0 2 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 11 2 1 2 1211.6986 P0AEY3 P0AEY3 230 240 mazG Nucleoside triphosphate pyrophosphohydrolase yes yes 3 0.021337 23.376 By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 14428000 712630 658160 4161500 7368300 0 0 1527200 0 4578 240 5022 27371;27372;27373;27374;27375 20624 20624 1 10949000 10037000 35360000 55863000 0 0 11754000 0 VETGSGIGFGATVK CGGAFAGLDKVISHRVETGSGIGFGATVKA RVETGSGIGFGATVKAKSDKASEGELLAQV R V E V K A 1 0 0 0 0 0 1 4 0 1 0 1 0 1 0 1 2 0 0 2 0 0 14 0 1 1 1321.6878 P0A6H1 P0A6H1 262 275 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 2 0.0020852 56.225 By MS/MS By MS/MS By matching By matching 1 2 1 1 16796000 6028000 3826900 0 0 3367000 3574300 0 0 4579 70 5023 27376;27377;27378;27379;27380 20625;20626 20626 2 6028000 3917200 0 0 4061700 3959500 0 0 VEVETPEENTGDVIGDLSR GFKKAKPVLLEPIMKVEVETPEENTGDVIG TPEENTGDVIGDLSRRRGMLKGQESEVTGV K V E S R R 0 1 1 2 0 0 4 2 0 1 1 0 0 0 1 1 2 0 0 3 0 0 19 0 4 1 2057.9753 P0A6M8 P0A6M8 619 637 fusA Elongation factor G yes yes 2 1.976E-36 160.31 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41305000 9534900 6199600 0 0 11153000 14418000 0 0 4580 76 5024 27381;27382;27383;27384 20627;20628;20629;20630 20630 4 9534900 6346000 0 0 13453000 15972000 0 0 VEVLHKMIP HEEGLSNLRVMCHDAVEVLHKMIPDNSLRM VMCHDAVEVLHKMIPDNSLRMVQLFFPDPW A V E I P D 0 0 0 0 0 0 1 0 1 1 1 1 1 0 1 0 0 0 0 2 0 0 9 1 1 0 1064.6052 P0A8I5 P0A8I5 123 131 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2;3 0.011811 75.854 By MS/MS By MS/MS 1 2 88946000 0 0 0 0 24006000 64940000 0 0 4581 144 5025 27385;27386;27387 20631;20632 20632 2 0 0 0 0 34177000 92572000 0 0 VEVNLQAEPEHNR TWDLIPLCHPLMLSKVEVNLQAEPEHNRVR SKVEVNLQAEPEHNRVRIETLCRLTGKTGV K V E N R V 1 1 2 0 0 1 3 0 1 0 1 0 0 0 1 0 0 0 0 2 0 0 13 0 3 2 1533.7536 P0A738 P0A738 84 96 moaC Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2;3 6.0035E-36 147.74 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 250430000 63714000 65144000 0 0 58247000 63325000 0 0 4582 93 5026 27388;27389;27390;27391;27392;27393;27394;27395 20633;20634;20635;20636;20637;20638 20633 6 63714000 66682000 0 0 70263000 70150000 0 0 VEYREMDESLANLSEDEYYSEEER ETPEGRRTSRRKRAKVEYREMDESLANLSE LANLSEDEYYSEEERNAKAEKEKKLPPPPP K V E E R N 1 2 1 2 0 0 8 0 0 0 2 0 1 0 0 3 0 0 3 1 0 0 24 1 8 1 2984.2506 LSD1-FL-His LSD1-FL-His 120 143 yes yes 3 6.8499E-31 102.21 By matching By MS/MS 1 2 20078000 7245500 12833000 0 0 0 0 0 0 4583 24 5027;5028 27396;27397;27398 20639;20640 20639 43 2 7245500 13135000 0 0 0 0 0 0 VFAYATHPIFSGNAANNLR LCKAAEALKERGAKRVFAYATHPIFSGNAA ATHPIFSGNAANNLRNSVIDEVVVCDTIPL R V F L R N 4 1 3 0 0 0 0 1 1 1 1 0 0 2 1 1 1 0 1 1 0 0 19 0 0 5 2062.0385 P0A717 P0A717 244 262 prs Ribose-phosphate pyrophosphokinase yes yes 3 3.8944E-210 179.14 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 200900000 57870000 46227000 0 0 46802000 50004000 0 0 4584 91 5029 27399;27400;27401;27402 20641;20642;20643;20644 20641 4 57870000 47318000 0 0 56458000 55393000 0 0 VFELDFEENLR VAIATPIEYTRNPLRVFELDFEENLRIIRY NPLRVFELDFEENLRIIRYCVKYRKRIIFP R V F L R I 0 1 1 1 0 0 3 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 11 0 3 0 1409.6827 P77398 P77398 405 415 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 2.1422E-154 218.48 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 621400000 103440000 81477000 0 0 247270000 189210000 0 0 4585 432 5030 27403;27404;27405;27406 20645;20646;20647;20648;20649;20650;20651 20651 7 103440000 83400000 0 0 298290000 209610000 0 0 VFFCNSGAEANEAALK LRLAKKLIDATFADRVFFCNSGAEANEAAL FFCNSGAEANEAALKLARKFAHDRYGSHKS R V F L K L 4 0 2 0 1 0 2 1 0 0 1 1 0 2 0 1 0 0 0 1 0 0 16 0 2 4 1726.7985 P77581 P77581 99 114 astC Succinylornithine transaminase yes yes 2 1.8887E-134 203.83 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 103940000 28453000 27962000 0 0 21821000 25699000 0 0 4586 437 5031 27407;27408;27409;27410 20652;20653;20654;20655 20652 4 28453000 28622000 0 0 26323000 28469000 0 0 VFHTQVR GGAAQIEGLAACAQRVFHTQVRIGAPLNIT GLAACAQRVFHTQVRIGAPLNITGLTDYAQ R V F V R I 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 2 0 0 7 0 0 0 885.48209 P0ABH0 P0ABH0 351 357 ftsA Cell division protein FtsA yes yes 2 8.215E-18 143.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 126790000 35616000 47197000 0 0 21412000 22561000 0 0 4587 199 5032 27411;27412;27413;27414 20656;20657;20658;20659;20660;20661 20657 6 35616000 48311000 0 0 25829000 24993000 0 0 VFIMDDAEQFMPNYLR WNRDHKHGLKLYVQRVFIMDDAEQFMPNYL FIMDDAEQFMPNYLRFVRGLIDSSDLPLNV R V F L R F 1 1 1 2 0 1 1 0 0 1 1 0 2 2 1 0 0 0 1 1 0 0 16 0 1 2 1987.9172 P0A6Z3 P0A6Z3 304 319 htpG Chaperone protein HtpG yes yes 2 7.2668E-36 137.17 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 110150000 32024000 21787000 0 0 26926000 29415000 0 0 4588 88 5033 27415;27416;27417;27418 20662;20663 20662 2 32024000 22301000 0 0 32481000 32585000 0 0 VFLLQPAHIPWQVAE ICKDDLAPSLGRADEVFLLQPAHIPWQVAE VFLLQPAHIPWQVAEVAEACVQPAHWSGDV E V F A E V 2 0 0 0 0 2 1 0 1 1 2 0 0 1 2 0 0 1 0 2 0 0 15 0 0 4 1746.9457 P37773 P37773 384 398 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 4.1165E-16 98.249 By matching By matching By MS/MS By MS/MS 1 1 1 1 35993000 1332400 1424900 0 0 12222000 21013000 0 0 4589 360 5034 27419;27420;27421;27422 20664;20665 20664 2 20472000 21729000 0 0 188170000 318490000 0 0 VFMQPASEGTGIIAGGAMR GTLQHPVKGVHTGSRVFMQPASEGTGIIAG PASEGTGIIAGGAMRAVLEVAGVHNVLAKA R V F M R A 3 1 0 0 0 1 1 4 0 2 0 0 2 1 1 1 1 0 0 1 0 0 19 0 1 4 1891.9284 P0A7W1 P0A7W1 94 112 rpsE 30S ribosomal protein S5 yes yes 2 3.1924E-63 155.02 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 73962000 16743000 15700000 0 0 24286000 17232000 0 0 4590 131 5035 27423;27424;27425;27426 20666;20667;20668 20667 3 16743000 16071000 0 0 29296000 19090000 0 0 VFPDKPITEKPLAVR AMTRAVKRQGKIWIRVFPDKPITEKPLAVR VFPDKPITEKPLAVRMGKGKGNVEYWVALI R V F V R M 1 1 0 1 0 0 1 0 0 1 1 2 0 1 3 0 1 0 0 2 0 0 15 2 1 4 1708.9876 P0ADY7 P0ADY7 67 81 rplP 50S ribosomal protein L16 yes yes 3;4 0.00037423 54.898 By matching By MS/MS By MS/MS By MS/MS 1 2 1 3 39475000 6801800 11906000 0 0 6643600 14123000 0 0 4591 229 5036 27427;27428;27429;27430;27431;27432;27433 20669;20670;20671;20672;20673 20669 5 6801800 12187000 0 0 8014200 15645000 0 0 VFQTHSPVVDSISVK AFTVRKISNGEGVERVFQTHSPVVDSISVK VFQTHSPVVDSISVKRRGAVRKAKLYYLRE R V F V K R 0 0 0 1 0 1 0 0 1 1 0 1 0 1 1 3 1 0 0 4 0 0 15 0 0 1 1641.8726 P0A7K6 P0A7K6 73 87 rplS 50S ribosomal protein L19 yes yes 2;3 9.3647E-191 227.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 588730000 189530000 98455000 0 0 127170000 173570000 0 0 4592 109 5037 27434;27435;27436;27437;27438;27439;27440;27441 20674;20675;20676;20677;20678;20679;20680;20681 20681 8 189530000 100780000 0 0 153410000 192280000 0 0 VFVRSKLKE VFWHNDGWTIFRELEVFVRSKLKEYQYQEV IFRELEVFVRSKLKEYQYQEVKGPFMMDRV E V F K E Y 0 1 0 0 0 0 1 0 0 0 1 2 0 1 0 1 0 0 0 2 0 0 9 3 0 0 1104.6655 P0A8M3 P0A8M3 279 287 thrS Threonine--tRNA ligase yes yes 3 0.013343 39.305 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 1 113550000 19968000 20648000 13789000 11329000 7667800 8347700 12744000 19051000 4593 147 5038 27442;27443;27444;27445;27446;27447;27448;27449;27450;27451;27452;27453 20682;20683;20684 20682 2 125420000 106210000 117170000 85893000 67326000 77381000 98083000 109330000 VFVYGNR KNVLSRALYKVLAQRVFVYGNRTIIL____ LYKVLAQRVFVYGNRTIIL___________ R V F N R T 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 2 0 0 7 0 0 0 853.44464 P37051 P37051 270 276 purU Formyltetrahydrofolate deformylase yes yes 2 8.2622E-05 113.82 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 82762000 21478000 24998000 0 0 16195000 20091000 0 0 4594 354 5039 27454;27455;27456;27457 20685;20686;20687;20688 20686 4 21478000 25588000 0 0 19536000 22257000 0 0 VFWDPSVNLFGHVGSTTASR MGFGNLNKVVLCFDRVFWDPSVNLFGHVGS SVNLFGHVGSTTASRGELFLFWNLYKAPIL R V F S R G 1 1 1 1 0 0 0 2 1 0 1 0 0 2 1 3 2 1 0 3 0 0 20 0 0 2 2176.0702 LSD1-FL-His LSD1-FL-His 671 690 yes yes 2;3 4.4042E-165 265.56 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 2 2 9053000000 1879800000 2378700000 0 0 1877000000 2917500000 0 0 4595 24 5040 27458;27459;27460;27461;27462;27463;27464;27465;27466;27467;27468 20689;20690;20691;20692;20693;20694;20695;20696 20689 4 1924800000 2434800000 0 0 2264300000 3231900000 0 0 VGAATEVEMK QERVAKLAGGVAVIKVGAATEVEMKEKKAR VAVIKVGAATEVEMKEKKARVEDALHATRA K V G M K E 2 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 1 0 0 2 0 0 10 0 2 2 1033.5114 P0A6F5 P0A6F5 381 390 groL 60 kDa chaperonin yes yes 2 2.2575E-61 172.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 665920000 292090000 373830000 0 0 0 0 0 0 4596 68 5041;5042 27469;27470;27471;27472 20697;20698;20699;20700 20698 86 4 292090000 382660000 0 0 0 0 0 0 VGAATEVEMKEK QERVAKLAGGVAVIKVGAATEVEMKEKKAR VIKVGAATEVEMKEKKARVEDALHATRAAV K V G E K K 2 0 0 0 0 0 3 1 0 0 0 2 1 0 0 0 1 0 0 2 0 0 12 1 3 2 1290.649 P0A6F5 P0A6F5 381 392 groL 60 kDa chaperonin yes yes 2;3 0.0015347 61.65 By MS/MS By MS/MS By MS/MS 3 3 1 37740000 13327000 19533000 0 0 0 4880700 0 0 4597 68 5043 27473;27474;27475;27476;27477;27478;27479 20701;20702;20703 20703 2 19839000 24167000 0 0 0 6957400 0 0 VGANDAYGQYDENLVQRVP TALEGHEVGDKFDVAVGANDAYGQYDENLV DAYGQYDENLVQRVPKDVFMGVDELQVGMR A V G V P K 2 1 2 2 0 2 1 2 0 0 1 0 0 0 1 0 0 0 2 3 0 0 19 1 1 2 2106.997 P0A9K9 P0A9K9 62 80 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 7.3638E-132 201.48 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1011500000 39934000 60175000 0 0 609790000 301600000 0 0 4598 169 5044 27480;27481;27482;27483;27484;27485;27486;27487 20704;20705;20706;20707;20708;20709;20710;20711 20709 8 241070000 360150000 0 0 868150000 429930000 0 0 VGATYSR SRVKIANRELEANGKVGATYSRDLLGITKA RELEANGKVGATYSRDLLGITKASLATESF K V G S R D 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 7 0 0 1 752.3817 P0A8T7 P0A8T7 1298 1304 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.0032726 73.039 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 12425000 4630600 4326500 0 0 1840800 1627300 0 0 4599 153 5045 27488;27489;27490;27491 20712;20713;20714 20712 3 4630600 4428600 0 0 2220500 1802600 0 0 VGDAVQADVDEAR QAIGHIGKLAAGSLKVGDAVQADVDEARRA LKVGDAVQADVDEARRARIRLNHSATHLMH K V G A R R 3 1 0 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 13 0 1 3 1343.6317 P00957 P00957 544 556 alaS Alanine--tRNA ligase yes yes 2 6.3925E-36 147.37 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31442000 8389000 9674600 0 0 6650700 6728200 0 0 4600 33 5046 27492;27493;27494;27495 20715;20716;20717;20718 20718 4 8389000 9903000 0 0 8022700 7453300 0 0 VGDEVEILATAPAK DFGQNLIARNSGVIRVGDEVEILATAPAKI RVGDEVEILATAPAKIYGAAAADDTANITQ R V G A K I 3 0 0 1 0 0 2 1 0 1 1 1 0 0 1 0 1 0 0 2 0 0 14 0 2 4 1411.7559 P75863 P75863 257 270 ycbX Uncharacterized protein YcbX yes yes 2 1.2476E-08 69.346 By MS/MS By matching By matching By matching 1 1 1 1 12305000 3145900 3209200 0 0 2603500 3346400 0 0 4601 411 5047 27496;27497;27498;27499 20719 20719 0 3145900 3284900 0 0 3140600 3707000 0 0 VGDKFDVAVGANDAYGQYDE GSLISGLETALEGHEVGDKFDVAVGANDAY DVAVGANDAYGQYDENLVQRVPKDVFMGVD E V G D E N 3 0 1 4 0 1 1 3 0 0 0 1 0 1 0 0 0 0 2 3 0 0 20 1 0 3 2131.9334 P0A9K9 P0A9K9 54 73 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 2.9618E-158 206.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 5 1 1 6 4 2 4 10604000000 362260000 425520000 23699000 28231000 4612300000 4429800000 113090000 609400000 4602 169 5048 27500;27501;27502;27503;27504;27505;27506;27507;27508;27509;27510;27511;27512;27513;27514;27515;27516;27517;27518;27519;27520;27521;27522;27523;27524;27525 20720;20721;20722;20723;20724;20725;20726;20727;20728;20729;20730;20731;20732;20733;20734;20735;20736;20737;20738;20739;20740;20741;20742;20743;20744;20745;20746;20747;20748;20749;20750;20751;20752;20753;20754;20755;20756;20757;20758;20759;20760 20736 41 5540700000 6489300000 201370000 214030000 71010000000 67140000000 870350000 3497300000 VGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDE GSLISGLETALEGHEVGDKFDVAVGANDAY LVQRVPKDVFMGVDELQVGMRFLAETDQGP E V G D E L 3 1 2 6 0 2 2 4 0 0 1 2 1 2 1 0 0 0 2 7 0 0 36 3 1 4 3958.8683 P0A9K9 P0A9K9 54 89 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 4 1.3122E-283 233.94 By MS/MS By MS/MS 3 2 7818900000 0 0 0 0 4037300000 3781600000 0 0 4603 169 5049;5050 27526;27527;27528;27529;27530 20761;20762;20763;20764;20765;20766;20767;20768;20769 20769 160 9 0 0 0 0 62141000000 57317000000 0 0 VGDLSTEMIEHFFR GRPHLEYKAEFTYQRVGDLSTEMIEHFFRS RVGDLSTEMIEHFFRSLSYTMGVTLHLKTK R V G F R S 0 1 0 1 0 0 2 1 1 1 1 0 1 2 0 1 1 0 0 1 0 0 14 0 2 0 1679.7977 P06987 P06987 290 303 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2;3 2.5729E-145 240.85 By MS/MS By MS/MS By MS/MS By MS/MS 4 4 5 4 2099600000 425040000 612550000 0 0 510160000 551850000 0 0 4604 55 5051;5052 27531;27532;27533;27534;27535;27536;27537;27538;27539;27540;27541;27542;27543;27544;27545;27546;27547 20770;20771;20772;20773;20774;20775;20776;20777;20778;20779;20780;20781;20782;20783;20784 20781 73 15 425040000 627010000 0 0 626600000 611320000 0 0 VGEDHEVHVDVR QAKLLRFLNDGTFRRVGEDHEVHVDVRVIC FRRVGEDHEVHVDVRVICATQKNLVELVQK R V G V R V 0 1 0 2 0 0 2 1 2 0 0 0 0 0 0 0 0 0 0 4 0 0 12 0 2 0 1389.6637 P07604 P07604 323 334 tyrR Transcriptional regulatory protein TyrR yes yes 3 0.0015662 52.576 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 12305000 4919900 4825100 0 0 0 2560000 0 0 4605 58 5053 27548;27549;27550;27551 20785;20786;20787 20786 2 4919900 4939000 0 0 0 2835900 0 0 VGEEVEIVGIK RGTVVTGRVERGIIKVGEEVEIVGIKETQK GIIKVGEEVEIVGIKETQKSTCTGVEMFRK K V G I K E 0 0 0 0 0 0 3 2 0 2 0 1 0 0 0 0 0 0 0 3 0 0 11 0 3 0 1170.6496 P0CE48;P0CE47 P0CE48 239 249 tufB;tufA Elongation factor Tu 2;Elongation factor Tu 1 yes no 2 1.4196E-51 166.07 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 222800000 49221000 52894000 0 0 69182000 51506000 0 0 4606 269 5054 27552;27553;27554;27555 20788;20789;20790;20791 20788 4 49221000 54143000 0 0 83455000 57057000 0 0 VGEIELYDRDK LDGKELTAPISAHQRVGEIELYDRDKQVAH AHQRVGEIELYDRDKQVAHWPLVTLESVGE R V G D K Q 0 1 0 2 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 11 1 2 0 1335.667 P33013 P33013 348 358 dacD D-alanyl-D-alanine carboxypeptidase DacD yes yes 3 0.0039075 45.879 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 21972000 6538300 6150400 0 0 4020600 5262900 0 0 4607 341 5055 27556;27557;27558;27559 20792;20793 20792 2 6538300 6295500 0 0 4850000 5830100 0 0 VGERTPRKKEPP QPAGLSGPAEVGPGAVGERTPRKKEPPRAS PGAVGERTPRKKEPPRASPPGGLAEPPGSA A V G P P R 0 2 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 12 4 2 2 1392.7837 LSD1-FL-His LSD1-FL-His 57 68 yes yes 3 2.4899E-08 93.058 By MS/MS By MS/MS By MS/MS 1 1 2 45488000 10419000 13105000 0 0 0 21964000 0 0 4608 24 5056 27560;27561;27562;27563 20794;20795;20796;20797;20798;20799;20800 20796 7 62895000 78434000 0 0 0 31309000 0 0 VGFFNPIASEK VADSRNARNGRFIERVGFFNPIASEKEEGT FIERVGFFNPIASEKEEGTRLDLDRIAHWV R V G E K E 1 0 1 0 0 0 1 1 0 1 0 1 0 2 1 1 0 0 0 1 0 0 11 0 1 2 1207.6237 P0A7T3 P0A7T3 36 46 rpsP 30S ribosomal protein S16 yes yes 2 0.0039988 62.303 By MS/MS By MS/MS 1 1 18313000 0 0 0 0 10480000 7833100 0 0 4609 124 5057 27564;27565 20801 20801 1 0 0 0 0 12642000 8677400 0 0 VGFFNPIASEKEEGTRLDLDR VADSRNARNGRFIERVGFFNPIASEKEEGT IASEKEEGTRLDLDRIAHWVGQGATISDRV R V G D R I 1 2 1 2 0 0 3 2 0 1 2 1 0 2 1 1 1 0 0 1 0 0 21 2 3 2 2392.2023 P0A7T3 P0A7T3 36 56 rpsP 30S ribosomal protein S16 yes yes 4 3.0461E-20 95.094 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 84515000 27397000 28597000 0 0 14126000 14395000 0 0 4610 124 5058 27566;27567;27568;27569 20802;20803;20804;20805 20802 4 27397000 29272000 0 0 17040000 15947000 0 0 VGFGYGK FSFTALTVVGDGNGRVGFGYGKAREVPAAI VVGDGNGRVGFGYGKAREVPAAIQKAMEKA R V G G K A 0 0 0 0 0 0 0 3 0 0 0 1 0 1 0 0 0 0 1 1 0 0 7 0 0 0 726.37008 P0A7W1 P0A7W1 46 52 rpsE 30S ribosomal protein S5 yes yes 2 0.011715 53.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52468000 11350000 13138000 0 0 12782000 15198000 0 0 4611 131 5059 27570;27571;27572;27573 20806;20807;20808;20809 20808 4 11350000 13448000 0 0 15419000 16836000 0 0 VGFNANLR ICELKQAEFDHHAFRVGFNANLRDPNMRYH FDHHAFRVGFNANLRDPNMRYHLALLDGEV R V G L R D 1 1 2 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 0 1 889.477 P16691 P16691 36 43 phnO Protein PhnO yes yes 2 3.2953E-05 113.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51998000 10070000 14657000 0 0 15058000 12213000 0 0 4612 286 5060 27574;27575;27576;27577 20810;20811;20812;20813 20810 4 10070000 15003000 0 0 18164000 13530000 0 0 VGFNANLRDPNMR ICELKQAEFDHHAFRVGFNANLRDPNMRYH FRVGFNANLRDPNMRYHLALLDGEVVGMIG R V G M R Y 1 2 3 1 0 0 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 13 1 0 2 1502.7412 P16691 P16691 36 48 phnO Protein PhnO yes yes 3 7.2537E-11 113.61 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 114040000 44241000 29281000 0 0 18257000 22259000 0 0 4613 286 5061 27578;27579;27580;27581 20814;20815;20816;20817 20814 4 44241000 29972000 0 0 22023000 24658000 0 0 VGGIDPLIGR ERMENFTTNLNQLARVGGIDPLIGREKELE NQLARVGGIDPLIGREKELERAIQVLCRRR R V G G R E 0 1 0 1 0 0 0 3 0 2 1 0 0 0 1 0 0 0 0 1 0 0 10 0 0 1 995.57638 P0ABH9 P0ABH9 182 191 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 2 0.0072774 51.346 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14623000 3834800 2698200 0 0 3259200 4830400 0 0 4614 201 5062 27582;27583;27584;27585 20818;20819;20820 20818 3 3834800 2761900 0 0 3931600 5351100 0 0 VGGKLRFGDPGVRLFE PGWNSPQAWNKFQDEVGGKLRFGDPGVRLF GGKLRFGDPGVRLFETSENGLDYFTSVPAR E V G F E T 0 2 0 1 0 0 1 4 0 0 2 1 0 2 1 0 0 0 0 2 0 0 16 3 0 1 1745.9577 P33602 P33602 772 787 nuoG NADH-quinone oxidoreductase subunit G yes yes 3;4 0.00032289 53.403 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 1 2 2 2 75797000 3813000 4572600 9266700 12067000 6924800 14494000 8279200 16379000 4615 345 5063 27586;27587;27588;27589;27590;27591;27592;27593;27594;27595;27596;27597;27598 20821;20822;20823;20824;20825;20826;20827 20826 6 58585000 69733000 78738000 91488000 106610000 219680000 63718000 93995000 VGGSTYQVPVEVRPVR ALENVRPTVEVKSRRVGGSTYQVPVEVRPV GGSTYQVPVEVRPVRRNALAMRWIVEAARK R V G V R R 0 2 0 0 0 1 1 2 0 0 0 0 0 0 2 1 1 0 1 5 0 0 16 1 1 2 1741.9475 P02359 P02359 80 95 rpsG 30S ribosomal protein S7 yes yes 3 5.9817E-24 108.71 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 115170000 32258000 20761000 0 0 22304000 39851000 0 0 4616 36 5064 27599;27600;27601;27602 20828;20829;20830;20831 20830 4 32258000 21251000 0 0 26905000 44146000 0 0 VGGSTYQVPVEVRPVRR ALENVRPTVEVKSRRVGGSTYQVPVEVRPV GSTYQVPVEVRPVRRNALAMRWIVEAARKR R V G R R N 0 3 0 0 0 1 1 2 0 0 0 0 0 0 2 1 1 0 1 5 0 0 17 2 1 2 1898.0486 P02359 P02359 80 96 rpsG 30S ribosomal protein S7 yes yes 4 0.014503 21.841 By MS/MS By matching By matching 1 1 1 17462000 6777600 5296700 0 0 0 5387800 0 0 4617 36 5065 27603;27604;27605 20832 20832 1 6777600 5421800 0 0 0 5968500 0 0 VGGVATYR FGGDTAYSDDFFVGRVGGVATYRNSNFFGL DDFFVGRVGGVATYRNSNFFGLVDGLNFAV R V G Y R N 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 1 2 0 0 8 0 0 1 821.43955 P02931 P02931 155 162 ompF Outer membrane protein F yes yes 2 0.001297 94.662 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 71678000 12862000 15762000 3192900 0 18933000 18452000 0 2477300 4618 38 5066 27606;27607;27608;27609;27610;27611 20833;20834;20835;20836 20835 4 12862000 16134000 27129000 0 22838000 20440000 0 14217000 VGIRAIEE LRRAFSGIVAGNVKEVGIRAIEEFGPYKIN VAGNVKEVGIRAIEEFGPYKINGDKEIMRR E V G E E F 1 1 0 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 8 1 1 1 885.49198 P0ADR8 P0ADR8 403 410 ygdH LOG family protein YgdH yes yes 2 0.015665 77.058 By MS/MS 1 3487500 3487500 0 0 0 0 0 0 0 4619 225 5067 27612 20837 20837 1 53585000 0 0 0 0 0 0 0 VGKAKLLSHRPVRDIDRE KLLALLAERRELAVEVGKAKLLSHRPVRDI AKLLSHRPVRDIDRERDLLERLITLGKAHH E V G R E R 1 3 0 2 0 0 1 1 1 1 2 2 0 0 1 1 0 0 0 2 0 0 18 5 0 2 2088.1916 P0A9J8 P0A9J8 35 52 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 4 0.02217 14.254 By matching By MS/MS By MS/MS 1 1 1 6447800 1907000 0 0 0 2154000 2386800 0 0 4620 166 5068 27613;27614;27615 20838;20839 20838 2 29301000 0 0 0 33162000 36176000 0 0 VGKQFDVTRE MRFGIDMNTDYTLEEVGKQFDVTRERIRQI YTLEEVGKQFDVTRERIRQIEAKALRKLRH E V G R E R 0 1 0 1 0 1 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 2 0 0 1177.6091 P00579 P00579 576 585 rpoD RNA polymerase sigma factor RpoD yes yes 2;3 2.7728E-07 108.7 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 1 2 802640000 58662000 48842000 93095000 96849000 11192000 20565000 196590000 276850000 4621 27 5069 27616;27617;27618;27619;27620;27621;27622;27623;27624;27625;27626;27627;27628;27629 20840;20841;20842;20843;20844;20845;20846;20847;20848;20849;20850;20851;20852 20849 13 901320000 744850000 791010000 734270000 172300000 311700000 1513000000 1588800000 VGLFGGAGVGK IKVIDLMCPFAKGGKVGLFGGAGVGKTVNM KGGKVGLFGGAGVGKTVNMMELIRNIAIEH K V G G K T 1 0 0 0 0 0 0 5 0 0 1 1 0 1 0 0 0 0 0 2 0 0 11 0 0 1 960.53927 P0ABB4 P0ABB4 146 156 atpD ATP synthase subunit beta yes yes 2 0.00018405 80.438 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 46696000 9369900 10777000 0 0 12199000 14350000 0 0 4622 194 5070 27630;27631;27632;27633 20853;20854;20855;20856 20856 4 9369900 11032000 0 0 14716000 15897000 0 0 VGLLTGDVAQK RCEEIWGHLAADGHRVGLLTGDVAQKKRLR DGHRVGLLTGDVAQKKRLRILDEFTRGDLD R V G Q K K 1 0 0 1 0 1 0 2 0 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 0 1 1099.6237 P0A8J8 P0A8J8 283 293 rhlB ATP-dependent RNA helicase RhlB yes yes 2 0.00030664 53.327 By MS/MS 1 0 0 0 0 0 0 0 0 0 4623 146 5071 27634 20857 20857 1 0 0 0 0 0 0 0 0 VGNLAFLDVTGR LSAQMARRLQVTSEKVGNLAFLDVTGRIAQ SEKVGNLAFLDVTGRIAQTLLNLAKQPDAM K V G G R I 1 1 1 1 0 0 0 2 0 0 2 0 0 1 0 0 1 0 0 2 0 0 12 0 0 1 1260.6826 P0ACJ8 P0ACJ8 132 143 crp cAMP-activated global transcriptional regulator CRP yes yes 2 9.9572E-101 195.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 13113000000 3240500000 3727800000 0 0 2508000000 3636400000 0 0 4624 213 5072 27635;27636;27637;27638;27639;27640 20858;20859;20860;20861;20862;20863;20864;20865;20866;20867;20868;20869;20870;20871 20861 14 3240500000 3823000000 0 0 3025400000 4028300000 0 0 VGNQLGLR GGHSINENEYLYARRVGNQLGLRELNICTG EYLYARRVGNQLGLRELNICTGCGPGAMEA R V G L R E 0 1 1 0 0 1 0 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 8 0 0 0 855.49265 P0ADR8 P0ADR8 170 177 ygdH LOG family protein YgdH yes yes 2 0.015201 49.59 By MS/MS By MS/MS By matching By matching 1 1 1 1 13853000 3821000 3550500 0 0 3337200 3144300 0 0 4625 225 5073 27641;27642;27643;27644 20872 20872 1 3821000 3634300 0 0 4025700 3483200 0 0 VGPAEGER RAMQVAIAAWDCFTRVGPAEGERAIAQAIV AWDCFTRVGPAEGERAIAQAIVYLACAPKS R V G E R A 1 1 0 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 8 0 2 2 813.39808 P0AAZ4 P0AAZ4 324 331 rarA Replication-associated recombination protein A yes yes 2 0.019692 65.252 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 13914000 5027700 5265700 0 0 2303400 1317100 0 0 4626 189 5074 27645;27646;27647;27648 20873 20873 0 5027700 5389900 0 0 2778600 1459100 0 0 VGPGAVGE SEVAAQPAGLSGPAEVGPGAVGERTPRKKE GLSGPAEVGPGAVGERTPRKKEPPRASPPG E V G G E R 1 0 0 0 0 0 1 3 0 0 0 0 0 0 1 0 0 0 0 2 0 0 8 0 0 2 684.34425 LSD1-FL-His LSD1-FL-His 52 59 yes yes 1 0.0033819 84.064 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 2 2 1 1 2 2 1 1 18991000000 2890300000 1880100000 2460600000 2475100000 1063000000 849250000 2978500000 4393600000 4627 24 5075 27649;27650;27651;27652;27653;27654;27655;27656;27657;27658;27659;27660 20874;20875;20876;20877 20874 3 44391000000 28655000000 20908000000 18765000000 16105000000 12855000000 22923000000 25214000000 VGPGELMVIDTR GIWDYQPDEVVEKGRVGPGELMVIDTRSGR KGRVGPGELMVIDTRSGRILHSAETDDDLK R V G T R S 0 1 0 1 0 0 1 2 0 1 1 0 1 0 1 0 1 0 0 2 0 0 12 0 1 1 1285.67 P09831 P09831 391 402 gltB Glutamate synthase [NADPH] large chain yes yes 2 5.4369E-05 74.944 By MS/MS By matching 2 1 7969400 5692400 2277100 0 0 0 0 0 0 4628 64 5076 27661;27662;27663 20878 20878 1 32833000 2330800 0 0 0 0 0 0 VGSTVHNVEMKPGKGGQLA AAIKPGNTLPMRNIPVGSTVHNVEMKPGKG VHNVEMKPGKGGQLARSAGTYVQIVARDGA P V G L A R 1 0 1 0 0 1 1 4 1 0 1 2 1 0 1 1 1 0 0 3 0 0 19 2 1 1 1907.9887 P60422 P60422 137 155 rplB 50S ribosomal protein L2 yes yes 3 1.2071E-15 86.573 By MS/MS By MS/MS By MS/MS 1 1 2 95043000 3899200 0 0 0 55260000 35884000 0 0 4629 379 5077;5078 27664;27665;27666;27667 20879;20880 20879 302 2 23538000 0 0 0 78672000 51152000 0 0 VGSTVHNVEMKPGKGGQLARSA AAIKPGNTLPMRNIPVGSTVHNVEMKPGKG VEMKPGKGGQLARSAGTYVQIVARDGAYVT P V G S A G 2 1 1 0 0 1 1 4 1 0 1 2 1 0 1 2 1 0 0 3 0 0 22 3 1 2 2222.159 P60422 P60422 137 158 rplB 50S ribosomal protein L2 yes yes 4;5 1.1579E-08 66.045 By MS/MS By MS/MS By MS/MS 3 1 3 17284000 2462400 460470 0 0 0 14362000 0 0 4630 379 5079;5080 27668;27669;27670;27671;27672;27673;27674 20881;20882;20883 20882 302 3 14864000 2755900 0 0 0 20472000 0 0 VGTPAITR VPNDPKSPFVTSGIRVGTPAITRRGFKEAE FVTSGIRVGTPAITRRGFKEAEAKELAGWM R V G T R R 1 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 2 0 0 1 0 0 8 0 0 2 813.47085 P0A825 P0A825 364 371 glyA Serine hydroxymethyltransferase yes yes 2 0.0045467 62.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9615800 2054500 3117600 0 0 1916800 2526800 0 0 4631 136 5081 27675;27676;27677;27678 20884;20885;20886;20887 20885 4 2054500 3191200 0 0 2312300 2799200 0 0 VGTVTPNVAEAVK LGQVLGPRGLMPNPKVGTVTPNVAEAVKNA PKVGTVTPNVAEAVKNAKAGQVRYRNDKNG K V G V K N 2 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 2 0 0 4 0 0 13 0 1 3 1283.7085 P0A7L0 P0A7L0 142 154 rplA 50S ribosomal protein L1 yes yes 2 3.955E-14 121.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 141440000 35666000 36642000 0 0 29049000 40087000 0 0 4632 110 5082 27679;27680;27681;27682 20888;20889;20890;20891 20889 2 35666000 37506000 0 0 35042000 44408000 0 0 VGVIVGAEQQVAEVAQK LVGCGQDEKDPNHIKVGVIVGAEQQVAEVA VIVGAEQQVAEVAQKVAKDKYGLDVELVTF K V G Q K V 3 0 0 0 0 3 2 2 0 1 0 1 0 0 0 0 0 0 0 5 0 0 17 0 2 3 1723.9468 P28635 P28635 35 51 metQ D-methionine-binding lipoprotein MetQ yes yes 2 0.0014479 65.563 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 17838000 2304300 3754700 0 0 5758400 6021000 0 0 4633 326 5083 27683;27684;27685;27686 20892 20892 1 2304300 3843300 0 0 6946400 6670000 0 0 VGVTVLMATHDINLISR ALSEGILRLFEEFNRVGVTVLMATHDINLI VTVLMATHDINLISRRSYRMLTLSDGHLHG R V G S R R 1 1 1 1 0 0 0 1 1 2 2 0 1 0 0 1 2 0 0 3 0 0 17 0 0 1 1838.0084 P0A9R7 P0A9R7 186 202 ftsE Cell division ATP-binding protein FtsE yes yes 3 0.015581 30.536 By matching By MS/MS 1 1 8586800 4384400 0 0 0 4202400 0 0 0 4634 174 5084 27687;27688 20893 20893 0 4384400 0 0 0 5069400 0 0 0 VGVYSSPHLVR TCRTLESILMAAGYKVGVYSSPHLVRYTER AGYKVGVYSSPHLVRYTERVRVQGQELPES K V G V R Y 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 2 0 0 1 3 0 0 11 0 0 1 1212.6615 P08192 P08192 78 88 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 3 0.00067691 62.466 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 51363000 13856000 16076000 0 0 9939700 11491000 0 0 4635 59 5085 27689;27690;27691;27692 20894;20895;20896 20894 3 13856000 16455000 0 0 11990000 12730000 0 0 VGYINDQYVLNPTQDELK SLSGIPFNGPIGAARVGYINDQYVLNPTQD INDQYVLNPTQDELKESKLDLVVAGTEAAV R V G L K E 0 0 2 2 0 2 1 1 0 1 2 1 0 0 1 0 1 0 2 2 0 0 18 0 1 1 2108.0426 P05055 P05055 154 171 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 9.2107E-44 142.85 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39599000 6191500 8867800 0 0 12650000 11891000 0 0 4636 48 5086 27693;27694;27695;27696 20897;20898;20899;20900 20900 4 6191500 9077100 0 0 15259000 13172000 0 0 VGYINDQYVLNPTQDELKESK SLSGIPFNGPIGAARVGYINDQYVLNPTQD QYVLNPTQDELKESKLDLVVAGTEAAVLMV R V G S K L 0 0 2 2 0 2 2 1 0 1 2 2 0 0 1 1 1 0 2 2 0 0 21 1 2 1 2452.2122 P05055 P05055 154 174 pnp Polyribonucleotide nucleotidyltransferase yes yes 3 0.0074964 28.505 By matching By matching By MS/MS 1 1 1 18889000 5823000 4995100 0 0 8071100 0 0 0 4637 48 5087 27697;27698;27699 20901 20901 1 5823000 5112900 0 0 9736200 0 0 0 VHDLNEDAEFDENGVEVFDEK ______________________________ DAEFDENGVEVFDEKALVEQEPSDNDLAEE K V H E K A 1 0 2 4 0 0 5 1 1 0 1 1 0 2 0 0 0 0 0 3 0 0 21 0 5 1 2449.0557 P13445 P13445 8 28 rpoS RNA polymerase sigma factor RpoS yes yes 3 1.4559E-14 88.09 By MS/MS By MS/MS By MS/MS 1 1 1 37271000 0 11685000 0 0 11232000 14354000 0 0 4638 279 5088 27700;27701;27702 20902 20902 1 0 11961000 0 0 13549000 15902000 0 0 VHIINLEK WNPKMKPFIFGARNKVHIINLEKTVPMFNE IFGARNKVHIINLEKTVPMFNEALAELNKI K V H E K T 0 0 1 0 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 1 0 964.57057 P0A7V0 P0A7V0 38 45 rpsB 30S ribosomal protein S2 yes yes 2 1.7775E-45 164.53 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 469210000 174160000 130070000 0 0 82930000 82044000 0 0 4639 128 5089 27703;27704;27705;27706 20903;20904;20905;20906 20903 4 174160000 133140000 0 0 100040000 90886000 0 0 VHLHAPHAE GPRHLMELKGLIYNEVHLHAPHAEQLEGFT GLIYNEVHLHAPHAEQLEGFTLQQSAELCY E V H A E Q 2 0 0 0 0 0 1 0 3 0 1 0 0 0 1 0 0 0 0 1 0 0 9 0 0 3 1009.5094 P36999 P36999 195 203 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 0.00074259 100.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 2 2 81035000 4083500 2681000 12093000 11385000 1739400 1212700 21220000 26621000 4640 352 5090 27707;27708;27709;27710;27711;27712;27713;27714;27715;27716;27717 20907;20908;20909;20910;20911 20907 5 62742000 40885000 102760000 86316000 26779000 18380000 163310000 152770000 VHLHAPHAEQLE GPRHLMELKGLIYNEVHLHAPHAEQLEGFT YNEVHLHAPHAEQLEGFTLQQSAELCYPMR E V H L E G 2 0 0 0 0 1 2 0 3 0 2 0 0 0 1 0 0 0 0 1 0 0 12 0 1 3 1379.6946 P36999 P36999 195 206 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 1.9715E-17 78.655 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 1 1 1 795020000 0 64420000 125920000 178790000 58496000 50015000 117960000 199430000 4641 352 5091 27718;27719;27720;27721;27722;27723;27724;27725;27726;27727;27728 20912;20913;20914;20915;20916;20917;20918;20919;20920;20921 20912 10 0 982410000 1069900000 1355500000 900590000 758060000 907830000 1144500000 VHLITCHNDMAK IKNPVGLSGVRMQAKVHLITCHNDMAKNIV QAKVHLITCHNDMAKNIVKAVERCGLKVDQ K V H A K N 1 0 1 1 1 0 0 0 2 1 1 1 1 0 0 0 1 0 0 1 0 0 12 0 0 1 1437.6857 P0ABH0 P0ABH0 158 169 ftsA Cell division protein FtsA yes yes 2;3 0.0023046 60.102 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 2 2 1 78253000 37485000 5040700 2106600 0 27276000 4974400 0 1370100 4642 199 5092 27729;27730;27731;27732;27733;27734;27735;27736;27737 20922;20923;20924;20925 20922 3 37485000 5159700 17900000 0 32903000 25748000 0 7862700 VHQRLTE ATADRRALNNELQQEVHQRLTEALNPNDKG LNNELQQEVHQRLTEALNPNDKG_______ E V H T E A 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 7 1 0 0 881.47191 P27249 P27249 876 882 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.018564 37.094 By MS/MS By MS/MS By MS/MS 1 1 1 27004000 0 0 0 7524400 0 0 7567300 11913000 4643 320 5093 27738;27739;27740 20926 20926 0 0 0 0 57047000 0 0 58240000 68364000 VHSPGVGACLASAHEE AMAKDRPEQDFLGIEVHSPGVGACLASAHE HSPGVGACLASAHEEGLSNLRVMCHDAVEV E V H E E G 3 0 0 0 1 0 2 2 2 0 1 0 0 0 1 2 0 0 0 2 0 0 16 0 1 4 1619.7362 P0A8I5 P0A8I5 95 110 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3 1.3737E-07 74.475 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 15662000 7942000 0 0 0 0 0 0 7720100 4644 144 5094 27741;27742;27743;27744;27745 20927;20928;20929;20930 20927 4 122030000 0 0 0 0 0 0 44304000 VHSYLER QLEAPYNSDTVLVHRVHSYLERHGLINFGI SDTVLVHRVHSYLERHGLINFGIYKRIKPL R V H E R H 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 1 1 0 0 7 0 1 0 902.46102 LSD1-FL-His LSD1-FL-His 254 260 yes yes 2 7.5668E-25 148.98 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 22719000000 5973300000 7326000000 0 0 4244700000 5175400000 0 0 4645 24 5095 27746;27747;27748;27749;27750;27751;27752;27753 20931;20932;20933;20934;20935;20936;20937;20938;20939;20940;20941;20942;20943;20944 20943 14 5973300000 7498900000 0 0 5120400000 5733100000 0 0 VHTAIVVQDPTMQR NARFSIALLNQAVERVHTAIVVQDPTMQRR RVHTAIVVQDPTMQRRTMATFRRMTGDNPD R V H Q R R 1 1 0 1 0 2 0 0 1 1 0 0 1 0 1 0 2 0 0 3 0 0 14 0 0 2 1593.8297 P34209 P34209 144 157 ydcF Protein YdcF yes yes 3 4.7287E-18 121.04 By MS/MS By MS/MS By MS/MS 2 2 1 79450000 31716000 29063000 0 0 18672000 0 0 0 4646 347 5096;5097 27754;27755;27756;27757;27758 20945;20946;20947;20948 20946 279 4 31716000 29749000 0 0 22525000 0 0 0 VHVDEYDVDVIDSQSASK SVPKTEGQKLAGALKVHVDEYDVDVIDSQS DEYDVDVIDSQSASKLIPAAVEGGLHQIET K V H S K L 1 0 0 4 0 1 1 0 1 1 0 1 0 0 0 3 0 0 1 4 0 0 18 0 1 1 2004.9276 P35340 P35340 275 292 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 0 420.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2500700000 623280000 752360000 0 0 455530000 669510000 0 0 4647 348 5098 27759;27760;27761;27762;27763;27764;27765;27766 20949;20950;20951;20952;20953;20954;20955;20956;20957;20958 20950 10 623280000 770120000 0 0 549510000 741670000 0 0 VHVQPMVTE RPQDVQVEEQREQEEVHVQPMVTEVPVAAA QREQEEVHVQPMVTEVPVAAAIEPVVSAPV E V H T E V 0 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 1 0 0 3 0 0 9 0 0 1 1038.5168 P21513 P21513 865 873 rne Ribonuclease E yes yes 2 0.017108 58.981 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 7427400 2784100 2248100 0 0 1158700 1236600 0 0 4648 297 5099 27767;27768;27769;27770 20959 20959 1 42776000 34284000 0 0 17839000 18742000 0 0 VHVSGDGSHFQVIAVGE NEIQSVLMNALSLQEVHVSGDGSHFQVIAV VSGDGSHFQVIAVGELFDGMSRVKKQQTVY E V H G E L 1 0 0 1 0 1 1 3 2 1 0 0 0 1 0 2 0 0 0 4 0 0 17 0 0 1 1736.8482 P0A9W6 P0A9W6 19 35 ibaG Acid stress protein IbaG yes yes 2;3 9.223E-23 89.541 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 4 3 2 2 3 1010400000 32848000 31060000 149200000 189560000 49186000 44139000 169560000 344810000 4649 178 5100 27771;27772;27773;27774;27775;27776;27777;27778;27779;27780;27781;27782;27783;27784;27785;27786;27787;27788;27789;27790;27791;27792;27793 20960;20961;20962;20963;20964;20965;20966;20967;20968;20969;20970;20971;20972 20966 13 497050000 467330000 1267700000 1437100000 672690000 669000000 1305000000 1978800000 VIAAAVTEQPQVITE VAEPQPEVVETTHPEVIAAAVTEQPQVITE VIAAAVTEQPQVITESDVAVAQEVAEQAEP E V I T E S 3 0 0 0 0 2 2 0 0 2 0 0 0 0 1 0 2 0 0 3 0 0 15 0 1 4 1567.8457 P21513 P21513 917 931 rne Ribonuclease E yes yes 2 3.0432E-28 106.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 31654000 2637400 2150400 4059600 0 4889100 4719000 4935900 8262700 4650 297 5101 27794;27795;27796;27797;27798;27799;27800;27801 20973;20974;20975;20976;20977;20978;20979;20980 20978 8 40523000 32795000 34494000 0 75273000 71524000 37988000 47418000 VIAGKKHYFDPKVIPSIAYTEPE MLAHKGVHEGHVAAEVIAGKKHYFDPKVIP FDPKVIPSIAYTEPEVAWVGLTEKEAKEKG E V I P E V 2 0 0 1 0 0 2 1 1 3 0 3 0 1 3 1 1 0 2 2 0 0 23 3 1 5 2601.3843 P0A9P0 P0A9P0 334 356 lpdA Dihydrolipoyl dehydrogenase yes yes 4 0.00081047 28.412 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 69908000 0 6825500 3362900 4334600 16913000 9689900 5882300 22900000 4651 172 5102 27802;27803;27804;27805;27806;27807;27808 20981;20982;20983 20983 3 0 104090000 28574000 32863000 260390000 146870000 45271000 131420000 VIAHLVNWE LKARGYTFVSETDTEVIAHLVNWELKQGGT SETDTEVIAHLVNWELKQGGTLREAVLRAI E V I W E L 1 0 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 1 0 2 0 0 9 0 0 1 1079.5764 P17169 P17169 127 135 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 0.00026575 86.113 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 543510000 30756000 37750000 153430000 155470000 11575000 11580000 76328000 66615000 4652 288 5103 27809;27810;27811;27812;27813;27814;27815;27816 20984;20985;20986;20987 20984 4 472560000 575700000 1303700000 1178700000 178210000 175510000 587430000 382290000 VIAIDVNDEQLK GNLALQYAKNVFNAKVIAIDVNDEQLKLAT NAKVIAIDVNDEQLKLATEMGADLAINSHT K V I L K L 1 0 1 2 0 1 1 0 0 2 1 1 0 0 0 0 0 0 0 2 0 0 12 0 1 1 1355.7296 P39451 P39451 189 200 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2 6.0837E-27 143.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 88669000 19377000 20396000 0 0 24301000 24595000 0 0 4653 364 5104 27817;27818;27819;27820 20988;20989;20990;20991 20991 4 19377000 20878000 0 0 29314000 27245000 0 0 VIANANFTGR RLRSNVRELEGALNRVIANANFTGRAITID GALNRVIANANFTGRAITIDFVREALRDLL R V I G R A 2 1 2 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 1 0 0 10 0 0 2 1061.5618 P03004 P03004 343 352 dnaA Chromosomal replication initiator protein DnaA yes yes 2 1.1053E-06 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15971000 4950900 0 0 0 5386700 5633800 0 0 4654 40 5105 27821;27822;27823;27824 20992;20993;20994;20995 20993 4 4950900 0 0 0 6498000 6241000 0 0 VIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE SSDNMHIIEMPHVEEVIAPIFYTVPLQLLA DVDQPRNLAKSVTVE_______________ E V I V E - 4 1 1 2 0 2 1 1 1 3 5 2 0 1 3 1 3 0 2 6 0 0 39 3 0 7 4291.3984 P17169 P17169 571 609 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 5 4.3828E-55 117.54 By MS/MS By MS/MS 1 1 170690000 0 0 0 0 69678000 101010000 0 0 4655 288 5106 27825;27826 20996;20997 20996 2 0 0 0 0 1072800000 1531000000 0 0 VIARPFIGDK IAREELTNGGYNIGRVIARPFIGDKAGNFQ YNIGRVIARPFIGDKAGNFQRTGNRHDLAV R V I D K A 1 1 0 1 0 0 0 1 0 2 0 1 0 1 1 0 0 0 0 1 0 0 10 1 0 2 1114.6499 P0A6K6 P0A6K6 211 220 deoB Phosphopentomutase yes yes 3 0.0014525 56.548 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 100740000 27506000 28329000 0 0 19151000 25754000 0 0 4656 75 5107 27827;27828;27829;27830;27831 20998;20999;21000;21001 20999 4 62322000 28997000 0 0 23101000 28529000 0 0 VIDARRSGGK VLVCGSFHTVAHVMEVIDARRSGGK_____ AHVMEVIDARRSGGK_______________ E V I G K - 1 2 0 1 0 0 0 2 0 1 0 1 0 0 0 1 0 0 0 1 0 0 10 2 0 1 1057.5992 P08192 P08192 413 422 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 3 0.0064831 44.203 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6777100 0 0 1000700 1268300 0 0 2426200 2081900 4657 59 5108 27832;27833;27834;27835 21002;21003;21004 21002 1 0 0 8502900 9615700 0 0 18672000 11948000 VIDEIKLPPGTIIGAVVR AVAHGDESTSRVVGRVIDEIKLPPGTIIGA EIKLPPGTIIGAVVRGNDVMIANDNLRIEQ R V I V R G 1 1 0 1 0 0 1 2 0 4 1 1 0 0 2 0 1 0 0 3 0 0 18 1 1 3 1889.135 P0AGI8 P0AGI8 398 415 trkA Trk system potassium uptake protein TrkA yes yes 3 0.00035205 47.916 By MS/MS By MS/MS By matching By matching 1 1 1 1 29256000 10598000 7042600 0 0 5525700 6090200 0 0 4658 264 5109 27836;27837;27838;27839 21005;21006 21006 2 10598000 7208900 0 0 6665700 6746500 0 0 VIDHYENPR ______________________________ MAYSEKVIDHYENPRNVGSFDNNDENVGSG K V I P R N 0 1 1 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 1 1 0 0 9 0 1 1 1141.5516 P0ACD4 P0ACD4 7 15 iscU Iron-sulfur cluster assembly scaffold protein IscU yes yes 3 9.6485E-05 72.643 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15319000 7592700 0 0 0 2780600 4946000 0 0 4659 209 5110 27840;27841;27842;27843 21007;21008;21009;21010 21008 4 7592700 0 0 0 3354300 5479100 0 0 VIDLMCPFAK EELSNSQELLETGIKVIDLMCPFAKGGKVG ETGIKVIDLMCPFAKGGKVGLFGGAGVGKT K V I A K G 1 0 0 1 1 0 0 0 0 1 1 1 1 1 1 0 0 0 0 1 0 0 10 0 0 2 1192.5984 P0ABB4 P0ABB4 133 142 atpD ATP synthase subunit beta yes yes 2 0.00082314 69.825 By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 14696000 4190700 2470600 0 0 2340600 5694000 0 0 4660 194 5111 27844;27845;27846;27847;27848 21011;21012;21013 21011 3 4190700 2528900 0 0 2823500 6307700 0 0 VIEDQLQAGTLSEVAVPLPR HAVRHGLGISCLSRRVIEDQLQAGTLSEVA LQAGTLSEVAVPLPRLMRTLWRIHHRQKHL R V I P R L 2 1 0 1 0 2 2 1 0 1 3 0 0 0 2 1 1 0 0 3 0 0 20 0 2 4 2134.1634 P0ACR4 P0ACR4 241 260 yeiE Uncharacterized HTH-type transcriptional regulator YeiE yes yes 2;3 2.7562E-124 234.22 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 133080000 22090000 28897000 0 0 32758000 49339000 0 0 4661 218 5112 27849;27850;27851;27852;27853;27854;27855;27856 21014;21015;21016;21017;21018;21019;21020;21021 21020 8 22090000 29579000 0 0 39516000 54657000 0 0 VIEFSDDSIEAR QQHHHDHLICLDCGKVIEFSDDSIEARQRE CGKVIEFSDDSIEARQREIAAKHGIRLTNH K V I A R Q 1 1 0 2 0 0 2 0 0 2 0 0 0 1 0 2 0 0 0 1 0 0 12 0 2 1 1379.6569 P0A9A9 P0A9A9 99 110 fur Ferric uptake regulation protein yes yes 2 2.9245E-70 203.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4932100000 1627100000 1173100000 0 0 1027200000 1104700000 0 0 4662 162 5113 27857;27858;27859;27860 21022;21023;21024;21025 21025 4 1627100000 1200800000 0 0 1239200000 1223800000 0 0 VIEIAVK KQATFEEMIARRPERVIEIAVKGMLPKGPL MIARRPERVIEIAVKGMLPKGPLGRAMFRK R V I V K G 1 0 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 0 2 0 0 7 0 1 1 770.49019 P0AA10 P0AA10 100 106 rplM 50S ribosomal protein L13 yes yes 1;2 4.985E-18 107.43 By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 612060000 68197000 429890000 0 0 43063000 70913000 0 0 4663 182 5114 27861;27862;27863;27864;27865 21026;21027;21028 21026 1 68197000 440030000 0 0 51947000 78555000 0 0 VIFDVAHNPHAAEYLTGR AILPGRFQIVSESPRVIFDVAHNPHAAEYL DVAHNPHAAEYLTGRMKALPKNGRVLAVIG R V I G R M 3 1 1 1 0 0 1 1 2 1 1 0 0 1 1 0 1 0 1 2 0 0 18 0 1 4 2009.0119 P08192 P08192 299 316 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 3;4 2.0359E-12 78.661 By MS/MS By MS/MS By MS/MS By matching 2 2 1 1 84197000 34701000 26899000 0 0 14700000 7896300 0 0 4664 59 5115 27866;27867;27868;27869;27870;27871 21029;21030;21031;21032 21029 4 34701000 27534000 0 0 17733000 8747300 0 0 VIGAYAWAHE GSTGFIPAGMDGNAEVIGAYAWAHEMSSGK DGNAEVIGAYAWAHEMSSGKDTPSGHWEIA E V I H E M 3 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 1 1 1 0 0 10 0 0 3 1115.54 P0A6K6 P0A6K6 82 91 deoB Phosphopentomutase yes yes 2 0.00059449 75.109 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 77914000 7115400 6185000 16547000 21322000 2059400 2906600 8696100 13083000 4665 75 5116 27872;27873;27874;27875;27876;27877;27878;27879 21033;21034;21035;21036;21037;21038 21034 6 109330000 94321000 140600000 161650000 31706000 44054000 66927000 75080000 VIGIGSPR QAMQGAADILRQSKKVIGIGSPRASVESNF ILRQSKKVIGIGSPRASVESNFALRELVGE K V I P R A 0 1 0 0 0 0 0 2 0 2 0 0 0 0 1 1 0 0 0 1 0 0 8 0 0 1 797.47594 P33602 P33602 312 319 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.1736E-60 145.04 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 148330000 41238000 35759000 0 0 34471000 36860000 0 0 4666 345 5117 27880;27881;27882;27883 21039;21040;21041 21040 1 41238000 36603000 0 0 41583000 40833000 0 0 VIGIHWGGVPNE TGGNSGSPVFNEKNEVIGIHWGGVPNEFNG KNEVIGIHWGGVPNEFNGAVFINENVRNFL E V I N E F 0 0 1 0 0 0 1 3 1 2 0 0 0 0 1 0 0 1 0 2 0 0 12 0 0 1 1276.6564 CON__P0C1U8 CON__P0C1U8 248 259 yes yes 2 0.0066278 64.265 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 547000000 0 0 167130000 157850000 0 0 110170000 111860000 + 4667 11 5118 27884;27885;27886;27887 21042;21043;21044 21043 3 0 0 1420100000 1196700000 0 0 847870000 641920000 VIGLFSQR ILSVLLENESGALSRVIGLFSQRGYNIESL ESGALSRVIGLFSQRGYNIESLTVAPTDDP R V I Q R G 0 1 0 0 0 1 0 1 0 1 1 0 0 1 0 1 0 0 0 1 0 0 8 0 0 0 918.5287 P00894 P00894 19 26 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2 1.0981E-22 128.57 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 4668 30 5119 27888;27889;27890 21045;21046;21047 21047 3 0 0 0 0 0 0 0 0 VIGQNEAVDAVSNAIR EREKLLRMEQELHHRVIGQNEAVDAVSNAI IGQNEAVDAVSNAIRRSRAGLADPNRPIGS R V I I R R 3 1 2 1 0 1 1 1 0 2 0 0 0 0 0 1 0 0 0 3 0 0 16 0 1 3 1654.8638 P63284-2;P63284 P63284-2 422 437 clpB Chaperone protein ClpB yes no 2 1.2816E-33 97.214 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4669 393 5120 27891;27892 21048;21049 21048 2 0 0 0 0 0 0 0 0 VIHDISEMNR EGRAIGHRIGAGPVKVIHDISEMNRIEPGD AGPVKVIHDISEMNRIEPGDVLVTDMTDPD K V I N R I 0 1 1 1 0 0 1 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 10 0 1 0 1212.5921 P23538 P23538 376 385 ppsA Phosphoenolpyruvate synthase yes yes 3 0.0082398 36.585 By MS/MS By MS/MS By MS/MS 1 1 1 13033000 4343900 0 0 0 4441500 4247400 0 0 4670 303 5121 27893;27894;27895 21050;21051;21052 21051 3 4343900 0 0 0 5357800 4705200 0 0 VIIAAHGNSLR YWNETILPRMKSGERVIIAAHGNSLRALVK SGERVIIAAHGNSLRALVKYLDNMSEEEIL R V I L R A 2 1 1 0 0 0 0 1 1 2 1 0 0 0 0 1 0 0 0 1 0 0 11 0 0 2 1149.6618 P62707 P62707 179 189 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase yes yes 3 0.0026383 47.894 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13474000 5156600 3335500 0 0 2649800 2332200 0 0 4671 390 5122 27896;27897;27898;27899 21053;21054;21055 21053 3 5156600 3414200 0 0 3196400 2583600 0 0 VIIIGSGVSGLAAAR IYKRIKPLPTKKTGKVIIIGSGVSGLAAAR VIIIGSGVSGLAAARQLQSFGMDVTLLEAR K V I A R Q 3 1 0 0 0 0 0 3 0 3 1 0 0 0 0 2 0 0 0 2 0 0 15 0 0 3 1382.8245 LSD1-FL-His LSD1-FL-His 283 297 yes yes 2;3 2.4491E-24 138.71 By MS/MS By MS/MS By MS/MS By MS/MS 10 10 7 7 35414000000 9832800000 7167600000 0 0 8019700000 10394000000 0 0 4672 24 5123 27900;27901;27902;27903;27904;27905;27906;27907;27908;27909;27910;27911;27912;27913;27914;27915;27916;27917;27918;27919;27920;27921;27922;27923;27924;27925;27926;27927;27928;27929;27930;27931;27932;27933 21056;21057;21058;21059;21060;21061;21062;21063;21064;21065;21066;21067;21068;21069;21070;21071;21072;21073;21074;21075;21076;21077;21078;21079;21080;21081;21082;21083;21084;21085;21086;21087;21088;21089;21090;21091;21092;21093;21094;21095;21096;21097;21098;21099;21100;21101;21102;21103;21104;21105;21106;21107;21108;21109;21110;21111;21112;21113;21114;21115;21116;21117 21057 62 10586000000 7620400000 0 0 10375000000 11744000000 0 0 VILAGEVTTPVTVR LKAANIIGIQIEFAKVILAGEVTTPVTVRG KVILAGEVTTPVTVRGLRVTKGARAAIEAA K V I V R G 1 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 3 0 0 4 0 0 14 0 1 2 1453.8504 P02413 P02413 110 123 rplO 50S ribosomal protein L15 yes yes 2;3 1.0688E-50 160.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 5843700000 1731400000 1033200000 0 0 1383600000 1695500000 0 0 4673 37 5124 27934;27935;27936;27937;27938;27939;27940;27941;27942 21118;21119;21120;21121;21122;21123;21124;21125;21126 21118 9 1753200000 1057600000 0 0 1696000000 1878300000 0 0 VINGNNNQQMRGVA DITVQLQGDGPMNLAVINGNNNQQMRGVAR AVINGNNNQQMRGVARVQGEIPENADLKTL A V I V A R 1 1 4 0 0 2 0 2 0 1 0 0 1 0 0 0 0 0 0 2 0 0 14 1 0 0 1513.742 P0A6Y5 P0A6Y5 79 92 hslO 33 kDa chaperonin yes yes 2 0.0035711 48.64 By MS/MS By MS/MS 2 1 4904800 0 0 0 0 3201700 1703100 0 0 4674 85 5125 27943;27944;27945 21127;21128 21127 2 0 0 0 0 4558200 2427700 0 0 VINQGEGAIPAR KKEGVNSTESGLQFRVINQGEGAIPARTDR QFRVINQGEGAIPARTDRVRVHYTGKLIDG R V I A R T 2 1 1 0 0 1 1 2 0 2 0 0 0 0 1 0 0 0 0 1 0 0 12 0 1 3 1223.6622 P0A9L3 P0A9L3 108 119 fklB FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase yes yes 2 4.8561E-05 57.598 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4675 170 5126 27946;27947 21129;21130 21130 2 0 0 0 0 0 0 0 0 VINQLTGGLAGMAK EPKTDIDKIRTWKEKVINQLTGGLAGMAKG KVINQLTGGLAGMAKGRKVKVVNGLGKFTG K V I A K G 2 0 1 0 0 1 0 3 0 1 2 1 1 0 0 0 1 0 0 1 0 0 14 0 0 2 1371.7544 P0A9P0 P0A9P0 93 106 lpdA Dihydrolipoyl dehydrogenase yes yes 2 1.0094E-09 88.576 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 58695000 18689000 14274000 0 0 12785000 12947000 0 0 4676 172 5127 27948;27949;27950;27951 21131;21132;21133;21134 21132 4 18689000 14611000 0 0 15423000 14342000 0 0 VIQDNLK EKGYDRAMGARPMARVIQDNLKKPLANELL MGARPMARVIQDNLKKPLANELLFGSLVDG R V I L K K 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 7 0 0 0 828.47052 P0ABH9 P0ABH9 707 713 clpA ATP-dependent Clp protease ATP-binding subunit ClpA yes yes 2 0.0024451 81.381 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13390000 3741800 4230600 0 0 2493600 2924100 0 0 4677 201 5128 27952;27953;27954;27955 21135;21136;21137 21137 3 3741800 4330400 0 0 3008100 3239200 0 0 VITPTQVRLTISE QLHNEKDLTKPAVLEVITPTQVRLTISEGR LEVITPTQVRLTISEGRYHQVKRMFAAVGN E V I S E G 0 1 0 0 0 1 1 0 0 2 1 0 0 0 1 1 3 0 0 2 0 0 13 1 0 1 1455.8297 P0AA43 P0AA43 168 180 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 6.4353E-14 115.57 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 6 1 580620000 64204000 70054000 23998000 28968000 152290000 184960000 22219000 33918000 4678 183 5129 27956;27957;27958;27959;27960;27961;27962;27963;27964;27965;27966;27967;27968 21138;21139;21140;21141;21142;21143;21144;21145;21146;21147;21148;21149;21150;21151;21152;21153;21154;21155;21156;21157;21158;21159;21160;21161;21162;21163 21141 26 986470000 1068300000 203910000 219620000 2344700000 2803400000 171000000 194650000 VIVLTGKDKGKRGKVKNVLSSGKVIVE ______________________________ GKVKNVLSSGKVIVEGINLVKKHQKPVPAL E V I V E G 0 1 1 1 0 0 1 4 0 2 2 6 0 0 0 2 1 0 0 6 0 0 27 7 0 0 2850.7382 P60624 P60624 11 37 rplX 50S ribosomal protein L24 yes yes 5 0.018789 13.092 By matching By MS/MS By matching 1 1 1 16373000 0 0 3264100 5374700 0 0 0 7734700 4679 381 5130 27969;27970;27971 21164 21164 1 0 0 27734000 40749000 0 0 0 44388000 VIVSQLHR LMTDNGTFVINGTERVIVSQLHRSPGVFFD VINGTERVIVSQLHRSPGVFFDSDKGKTHS R V I H R S 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 2 0 0 8 0 0 0 950.56615 P0A8V2 P0A8V2 144 151 rpoB DNA-directed RNA polymerase subunit beta yes yes 2 0.0028625 73.616 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 11971000 2783600 3323300 0 0 2498100 3365600 0 0 4680 154 5131 27972;27973;27974;27975 21165;21166;21167 21166 3 2783600 3401700 0 0 3013500 3728300 0 0 VIWAYGEK KPRWIYSVSKQLLDRVIWAYGEKEGLQFTL SKQLLDRVIWAYGEKEGLQFTLFRPFNWMG R V I E K E 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 1 1 1 0 0 8 0 1 1 964.50182 P77398 P77398 473 480 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.00087356 98.299 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3267000000 805070000 972270000 0 0 623670000 866000000 0 0 4681 432 5132 27976;27977;27978;27979 21168;21169;21170;21171 21168 4 805070000 995220000 0 0 752330000 959340000 0 0 VIYLSPQGR DAIHAAKAAAGEGAKVIYLSPQGRKLDQAG AGEGAKVIYLSPQGRKLDQAGVSELATNQK K V I G R K 0 1 0 0 0 1 0 1 0 1 1 0 0 0 1 1 0 0 1 1 0 0 9 0 0 1 1031.5764 P0A873 P0A873 84 92 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 1.022E-06 113.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 303170000 84831000 81942000 0 0 66776000 69618000 0 0 4682 140 5133 27980;27981;27982;27983 21172;21173;21174;21175 21173 3 84831000 83876000 0 0 80552000 77121000 0 0 VKAALELAEQR NDVVSIREKAKKQSRVKAALELAEQREKPT KQSRVKAALELAEQREKPTWLEVDAGKMEG R V K Q R E 3 1 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 11 1 2 3 1226.6983 P0A7V8 P0A7V8 155 165 rpsD 30S ribosomal protein S4 yes yes 2;3 4.7924E-05 86.344 By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 53609000 19380000 23411000 0 0 4953800 5865000 0 0 4683 130 5134 27984;27985;27986;27987;27988;27989;27990;27991 21176;21177;21178 21178 3 19380000 23963000 0 0 5975800 6497100 0 0 VKAEMENLR QLAEAQTRERDGILRVKAEMENLRRRTELD RDGILRVKAEMENLRRRTELDIEKAHKFAL R V K L R R 1 1 1 0 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 9 1 2 1 1088.5648 P09372 P09372 65 73 grpE Protein GrpE yes yes 2 0.00010579 69.598 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4684 62 5135 27992;27993 21179;21180 21179 2 0 0 0 0 0 0 0 0 VKAGDYLVLHDTGAYGASMSSNYNSRPLLPE TQQEGGNVETRALPEVKAGDYLVLHDTGAY ASMSSNYNSRPLLPEVLFDNGQARLIRRRQ E V K P E V 3 1 2 2 0 0 1 3 1 0 4 1 1 0 2 4 1 0 3 2 0 0 31 2 0 5 3324.6085 P00861 P00861 364 394 lysA Diaminopimelate decarboxylase yes yes 4 0.00025267 33.544 By MS/MS By MS/MS 1 1 21016000 0 0 0 0 7275100 13741000 0 0 4685 28 5136 27994;27995 21181;21182 21181 2 0 0 0 0 112010000 208270000 0 0 VKDLPGVR HNLQEHSVILIRGGRVKDLPGVRYHTVRGA ILIRGGRVKDLPGVRYHTVRGALDCSGVKD R V K V R Y 0 1 0 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 2 0 0 8 1 0 1 882.5287 P0A7S3 P0A7S3 87 94 rpsL 30S ribosomal protein S12 yes yes 2 0.0050045 89.046 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 69403000 15998000 19551000 0 0 14421000 19432000 0 0 4686 122 5137 27996;27997;27998;27999 21183;21184;21185;21186 21186 4 15998000 20013000 0 0 17397000 21527000 0 0 VKGDGSKVVGLE SLKNVDIILNAQTTEVKGDGSKVVGLEYRD TTEVKGDGSKVVGLEYRDRVSGDIHNIELA E V K L E Y 0 0 0 1 0 0 1 3 0 0 1 2 0 0 0 1 0 0 0 3 0 0 12 2 0 0 1186.6558 P35340 P35340 417 428 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 9.4378E-11 109.16 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 671840000 43450000 45673000 118600000 124050000 18946000 19993000 137550000 163580000 4687 348 5138 28000;28001;28002;28003;28004;28005;28006;28007 21187;21188;21189;21190;21191 21188 4 667600000 696510000 1007700000 940480000 291690000 303020000 1058600000 938750000 VKGDGSKVVGLEYRDRVSGDIHNIE SLKNVDIILNAQTTEVKGDGSKVVGLEYRD LEYRDRVSGDIHNIELAGIFVQIGLLPNTN E V K I E L 0 2 1 3 0 0 2 4 1 2 1 2 0 0 0 2 0 0 1 4 0 0 25 4 1 0 2741.4097 P35340 P35340 417 441 ahpF Alkyl hydroperoxide reductase subunit F yes yes 4 0.0001407 41.904 By MS/MS By MS/MS 1 1 19242000 0 3921000 0 0 0 15321000 0 0 4688 348 5139 28008;28009 21192 21192 1 0 59796000 0 0 0 232210000 0 0 VKGIKDVVTQPQA ALIDCLAPDRRVEIEVKGIKDVVTQPQA__ IEVKGIKDVVTQPQA_______________ E V K Q A - 1 0 0 1 0 2 0 1 0 1 0 2 0 0 1 0 1 0 0 3 0 0 13 2 0 1 1381.7929 P0A910 P0A910 334 346 ompA Outer membrane protein A yes yes 2;3 0.0024788 48.659 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 1 2 191250000 17785000 16422000 22994000 24649000 17189000 18154000 28299000 45757000 4689 158 5140 28010;28011;28012;28013;28014;28015;28016;28017;28018;28019;28020;28021;28022;28023;28024 21193;21194;21195;21196;21197;21198;21199 21197 7 273260000 250440000 195380000 186880000 264640000 275150000 217800000 262590000 VKGILEQYGHK KLDGVKPPKKETMERVKGILEQYGHKVMF_ TMERVKGILEQYGHKVMF____________ R V K H K V 0 0 0 0 0 1 1 2 1 1 1 2 0 0 0 0 0 0 1 1 0 0 11 1 1 0 1270.7034 P0A9N4 P0A9N4 233 243 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3 4.6397E-08 111.86 By MS/MS By MS/MS By matching 1 1 1 43894000 22788000 18097000 0 0 0 3008900 0 0 4690 171 5141 28025;28026;28027 21200;21201 21200 2 22788000 18524000 0 0 0 3333200 0 0 VKGPKNRKFISIEAE DHTLFAKADGKVKFEVKGPKNRKFISIEAE VKGPKNRKFISIEAE_______________ E V K A E - 1 1 1 0 0 0 2 1 0 2 0 3 0 1 1 1 0 0 0 1 0 0 15 4 1 2 1714.973 P0A7L8 P0A7L8 71 85 rpmA 50S ribosomal protein L27 yes yes 3 0.01542 17.629 By MS/MS 1 2791300 0 0 0 0 2791300 0 0 0 4691 112 5142 28028 21202 21202 1 0 0 0 0 42974000 0 0 0 VKGQKMAPPQISAE PFKIIAADNGDAWVEVKGQKMAPPQISAEV EVKGQKMAPPQISAEVLKKMKKTAEDYLGE E V K A E V 2 0 0 0 0 2 1 1 0 1 0 2 1 0 2 1 0 0 0 1 0 0 14 2 0 4 1482.7864 P0A6Y8 P0A6Y8 105 118 dnaK Chaperone protein DnaK yes yes 2;3 2.7813E-19 133.42 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 4 3 4 4 5 4 3 6249500000 405120000 336930000 1334500000 1598700000 149020000 171430000 1208000000 1045800000 4692 86 5143;5144 28029;28030;28031;28032;28033;28034;28035;28036;28037;28038;28039;28040;28041;28042;28043;28044;28045;28046;28047;28048;28049;28050;28051;28052;28053;28054;28055;28056;28057;28058;28059;28060 21203;21204;21205;21206;21207;21208;21209;21210;21211;21212;21213;21214;21215;21216;21217;21218;21219;21220;21221;21222;21223;21224;21225;21226;21227;21228;21229 21226 95 25 6208700000 5138300000 11339000000 12120000000 2294300000 2578400000 9297200000 6001600000 VKHPSEIVNVGDEITVK GVDGLLHITDMAWKRVKHPSEIVNVGDEIT HPSEIVNVGDEITVKVLKFDRERTRVSLGL R V K V K V 0 0 1 1 0 0 2 1 1 2 0 2 0 0 1 1 1 0 0 4 0 0 17 1 2 1 1863.0102 P0AG67 P0AG67 228 244 rpsA 30S ribosomal protein S1 yes yes 3;4 2.0656E-16 95.197 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 93989000 27808000 23479000 0 0 15067000 27635000 0 0 4693 261 5145 28061;28062;28063;28064;28065;28066;28067;28068 21230;21231;21232;21233;21234;21235 21231 6 27808000 24033000 0 0 18175000 30614000 0 0 VKIGVPFVDGGVIKAE TVEFAEVLMIANGEEVKIGVPFVDGGVIKA KIGVPFVDGGVIKAEVVAHGRGEKVKIVKF E V K A E V 1 0 0 1 0 0 1 3 0 2 0 2 0 1 1 0 0 0 0 4 0 0 16 2 0 2 1626.9345 P0AG48 P0AG48 47 62 rplU 50S ribosomal protein L21 yes yes 3 0.018581 26.781 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 11429000 955080 1328900 0 1065400 1942500 2623700 1198700 2314500 4694 258 5146 28069;28070;28071;28072;28073;28074;28075 21236 21236 0 14675000 20266000 0 8077200 29907000 39766000 9225700 13282000 VKNVLSSGK EVIVLTGKDKGKRGKVKNVLSSGKVIVEGI KGKRGKVKNVLSSGKVIVEGINLVKKHQKP K V K G K V 0 0 1 0 0 0 0 1 0 0 1 2 0 0 0 2 0 0 0 2 0 0 9 1 0 0 930.54983 P60624 P60624 25 33 rplX 50S ribosomal protein L24 yes yes 2 0.014303 56.258 By MS/MS By MS/MS By MS/MS 1 1 1 13230000 6645600 4055000 0 0 2529700 0 0 0 4695 381 5147 28076;28077;28078 21237;21238 21237 2 6645600 4150700 0 0 3051600 0 0 0 VKPGSLGHR DHTREHIPVLVYGPKVKPGSLGHRETFADI LVYGPKVKPGSLGHRETFADIGQTLAKYFG K V K H R E 0 1 0 0 0 0 0 2 1 0 1 1 0 0 1 1 0 0 0 1 0 0 9 1 0 1 949.54575 P0A6K6 P0A6K6 373 381 deoB Phosphopentomutase yes yes 2 0.0054995 71.501 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19104000 5005600 8450100 0 0 3665200 1982600 0 0 4696 75 5148 28079;28080;28081;28082 21239 21239 1 5005600 8649500 0 0 4421400 2196300 0 0 VKPPRDITAE EKIKELHQQYKEASEVKPPRDITAEFLVKS KEASEVKPPRDITAEFLVKSKHRDLTALCK E V K A E F 1 1 0 1 0 0 1 0 0 1 0 1 0 0 2 0 1 0 0 1 0 0 10 2 0 3 1124.619 LSD1-FL-His LSD1-FL-His 470 479 yes yes 2;3 0.0010387 86.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 5 4 3 2 5 3 2 54608000000 8833600000 5559400000 11150000000 12482000000 2507700000 2476900000 4335700000 7262800000 4697 24 5149 28083;28084;28085;28086;28087;28088;28089;28090;28091;28092;28093;28094;28095;28096;28097;28098;28099;28100;28101;28102;28103;28104;28105;28106;28107;28108;28109;28110;28111 21240;21241;21242;21243;21244;21245;21246;21247;21248;21249;21250 21248 9 135670000000 84757000000 94736000000 94633000000 38609000000 37530000000 33368000000 41680000000 VKPQVYAGLFPVSSDDYEAFR LARNPAEKALPGFKKVKPQVYAGLFPVSSD AGLFPVSSDDYEAFRDALGKLSLNDASLFY K V K F R D 2 1 0 2 0 1 1 1 0 0 1 1 0 2 2 2 0 0 2 3 0 0 21 1 1 4 2387.1798 P60785 P60785 291 311 lepA Elongation factor 4 yes yes 3 0.022262 21.901 By matching By MS/MS By MS/MS 1 1 1 9408000 2323700 3592600 0 0 0 3491600 0 0 4698 384 5150 28112;28113;28114 21251 21251 1 2323700 3677400 0 0 0 3867900 0 0 VKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE QRQATKDAGRIAGLEVKRIINEPTAAALAY VYDLGGGTFDISIIEIDEVDGEKTFEVLAT E V K I E I 5 2 2 3 0 0 2 6 0 6 3 2 0 1 1 1 4 0 2 2 0 0 42 4 1 6 4392.3329 P0A6Y8 P0A6Y8 165 206 dnaK Chaperone protein DnaK yes yes 4;5 1.0879E-123 156.26 By MS/MS By MS/MS 2 2 132370000 0 0 0 0 51297000 81072000 0 0 4699 86 5151 28115;28116;28117;28118 21252;21253;21254;21255 21255 4 0 0 0 0 789770000 1228800000 0 0 VKRQDIESNLQYDAGDKGIYRHYMQKE ITRRSVNIFDKTGAEVKRQDIESNLQYDAG DAGDKGIYRHYMQKEIYEQPNAIKNTLTGR E V K K E I 1 2 1 3 0 3 2 2 1 2 1 3 1 0 0 1 0 0 3 1 0 0 27 5 1 1 3283.6044 P17169 P17169 230 256 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4;5;6 5.8676E-10 73.322 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 3 4 4 1 239240000 26335000 35834000 0 0 103170000 67264000 0 6632000 4700 288 5152;5153 28119;28120;28121;28122;28123;28124;28125;28126;28127;28128;28129;28130;28131;28132 21256;21257;21258;21259;21260;21261;21262;21263;21264;21265;21266;21267;21268;21269 21262 244 14 404630000 546470000 0 0 1588400000 1019500000 0 38060000 VKRVALADKYFAKRAE ______________________________ KRVALADKYFAKRAELKAIISDVNASDEDR E V K A E L 4 2 0 1 0 0 1 0 0 0 1 3 0 1 0 0 0 0 1 2 0 0 16 5 0 4 1864.0683 P0AG59 P0AG59 11 26 rpsN 30S ribosomal protein S14 yes yes 3;4;5 3.4447E-05 56.851 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 1 2 2 1 2 156960000 15586000 17197000 1454400 2037200 22655000 24107000 44133000 29792000 4701 260 5154 28133;28134;28135;28136;28137;28138;28139;28140;28141;28142;28143;28144;28145;28146;28147 21270;21271;21272;21273;21274;21275;21276;21277 21272 8 184470000 220820000 12358000 15445000 348790000 365380000 339660000 170970000 VLAAANARAE FFEARRAELEAKLAEVLAAANARAEKINAL AKLAEVLAAANARAEKINALETVTIASKAG E V L A E K 5 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 10 1 0 5 984.53524 P0A7R1 P0A7R1 61 70 rplI 50S ribosomal protein L9 yes yes 2 8.5103E-05 78.334 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 183210000 7066600 7728800 39896000 0 2369600 3205700 57997000 64947000 4702 119 5155 28148;28149;28150;28151;28152;28153;28154 21278;21279;21280;21281;21282;21283;21284;21285 21279 8 108580000 117870000 338990000 0 36483000 48587000 446360000 372720000 VLAEQNADVR IDAESYILIDYNSGKVLAEQNADVRRDPAS YNSGKVLAEQNADVRRDPASLTKMMTSYVI K V L V R R 2 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 10 0 1 2 1113.5778 P0AEB2 P0AEB2 59 68 dacA D-alanyl-D-alanine carboxypeptidase DacA yes yes 2 0.0016025 68.224 By MS/MS By matching By matching By matching 1 1 1 1 15963000 3221300 4552400 0 0 4266100 3922800 0 0 4703 234 5156 28155;28156;28157;28158 21286 21286 1 3221300 4659800 0 0 5146200 4345600 0 0 VLAGEPR GEILHAIEKNVVRSRVLAGEPRIDGREKDM EKNVVRSRVLAGEPRIDGREKDMIRGLDVR R V L P R I 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 7 0 1 2 740.41809 P05055 P05055 309 315 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.0044017 50.966 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26493000 10810000 0 0 0 9214400 6468400 0 0 4704 48 5157 28159;28160;28161;28162 21287;21288;21289;21290 21288 4 10810000 0 0 0 11115000 7165500 0 0 VLATNGDTHLGGE SIIEIDEVDGEKTFEVLATNGDTHLGGEDF FEVLATNGDTHLGGEDFDSRLINYLVEEFK E V L G E D 1 0 1 1 0 0 1 3 1 0 2 0 0 0 0 0 2 0 0 1 0 0 13 0 0 1 1282.6153 P0A6Y8 P0A6Y8 218 230 dnaK Chaperone protein DnaK yes yes 2 2.6483E-10 93.111 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 46846000 0 0 6891800 8198300 0 0 12039000 19717000 4705 86 5158 28163;28164;28165;28166;28167 21291;21292;21293;21294;21295 21293 5 0 0 58558000 62156000 0 0 92653000 113150000 VLCNPPFHQQHA INNALSGVEPFRFNAVLCNPPFHQQHALTD FNAVLCNPPFHQQHALTDNVAWEMFHHARR A V L H A L 1 0 1 0 1 2 0 0 2 0 1 0 0 1 2 0 0 0 0 1 0 0 12 0 0 2 1446.6827 P42596 P42596 302 313 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 3 0.022978 40.589 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19191000 1634700 1232200 0 0 10251000 6073500 0 0 4706 366 5159 28168;28169;28170;28171 21296 21296 1 9867800 7375000 0 0 14594000 8657800 0 0 VLDAAVAGK DFVAKDAGFQAFADKVLDAAVAGKITDVEV QAFADKVLDAAVAGKITDVEVLKAQFEEER K V L G K I 3 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 9 0 0 3 842.48617 P0A6P1 P0A6P1 96 104 tsf Elongation factor Ts yes yes 2 0.00058535 75.738 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19013000 0 7221000 0 0 6652600 5139000 0 0 4707 77 5160 28172;28173;28174;28175 21297;21298;21299;21300 21297 4 0 7391400 0 0 8025100 5692800 0 0 VLDEFVVHTLGENAR PLILTGPKESADYFRVLDEFVVHTLGENAR VLDEFVVHTLGENARRHYRIIIDDAAEVAR R V L A R R 1 1 1 1 0 0 2 1 1 0 2 0 0 1 0 0 1 0 0 3 0 0 15 0 2 1 1697.8737 P0ADR8 P0ADR8 298 312 ygdH LOG family protein YgdH yes yes 3 1.0289E-10 93.823 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31109000 8167800 9028400 0 0 7912700 6000200 0 0 4708 225 5161 28176;28177;28178;28179 21301;21302;21303;21304 21301 4 8167800 9241500 0 0 9545100 6646800 0 0 VLDELTLAR NLRMSVEADINGLRRVLDELTLARADLEMQ INGLRRVLDELTLARADLEMQIESLKEELA R V L A R A 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 9 0 1 1 1028.5866 CON__P02533;CON__Q6IFX2;CON__A2A4G1;CON__P19012;CON__P08727;CON__P08779 CON__P02533 224 232 no no 2 1.1513E-19 141.52 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 94662000 16777000 18360000 553160 0 29997000 28975000 0 0 + 4709 4;10 5162 28180;28181;28182;28183;28184 21305;21306;21307;21308 21306 4 16777000 18794000 4700100 0 36185000 32098000 0 0 VLDELTLTK ALRQSVEADINGLRRVLDELTLTKADLEMQ INGLRRVLDELTLTKADLEMQIESLTEELA R V L T K A 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 2 0 0 1 0 0 9 0 1 0 1030.591 CON__P13645 CON__P13645 258 266 yes yes 2 1.9113E-13 128.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1021000000 168970000 140440000 0 0 316340000 395240000 0 0 + 4710 12 5163 28185;28186;28187;28188 21309;21310;21311;21312 21309 4 168970000 143750000 0 0 381600000 437840000 0 0 VLDFEEGR LELLPHRFPFLLVDRVLDFEEGRFLRAVKN PFLLVDRVLDFEEGRFLRAVKNVSVNEPFF R V L G R F 0 1 0 1 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 8 0 2 0 963.46616 P0A6Q6 P0A6Q6 29 36 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ yes yes 2 0.0020911 86.794 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24413000 5532300 6985800 0 0 6267300 5627700 0 0 4711 80 5164 28189;28190;28191;28192 21313;21314;21315;21316 21314 4 5532300 7150700 0 0 7560300 6234300 0 0 VLDLASPIGR RMERGNGSTEDLTARVLDLASPIGRGQRGL DLTARVLDLASPIGRGQRGLIVAPPKAGKT R V L G R G 1 1 0 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 1 0 0 10 0 0 2 1039.6026 P0AG30 P0AG30 161 170 rho Transcription termination factor Rho yes yes 2 0.00059011 80.165 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25010000 5966100 6288000 0 0 5522300 7233200 0 0 4712 256 5165 28193;28194;28195;28196 21317;21318;21319;21320 21318 3 5966100 6436400 0 0 6661600 8012800 0 0 VLDLIAHISK KLVSWYDNETGYSNKVLDLIAHISK_____ GYSNKVLDLIAHISK_______________ K V L S K - 1 0 0 1 0 0 0 0 1 2 2 1 0 0 0 1 0 0 0 1 0 0 10 0 0 1 1107.6652 P0A9B2 P0A9B2 322 331 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 3 0.0076046 37.995 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 19730000 3166400 3809400 0 0 6707800 6046800 0 0 4713 163 5166 28197;28198;28199;28200 21321;21322 21321 2 3166400 3899300 0 0 8091600 6698500 0 0 VLDLRVNQSDISDA RQNPQMKRALDNFKAVLDLRVNQSDISDAQ AVLDLRVNQSDISDAQIKKIIAVIDRAAFD A V L D A Q 1 1 1 3 0 1 0 0 0 1 2 0 0 0 0 2 0 0 0 2 0 0 14 1 0 0 1543.7842 P64588 P64588 174 187 yqjI Transcriptional regulator YqjI yes yes 2 5.5787E-27 125.97 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 29093000 4176200 4129200 0 0 6603500 14184000 0 0 4714 398 5167 28201;28202;28203;28204 21323;21324;21325 21324 3 25210000 24713000 0 0 9401300 20219000 0 0 VLEEALLQASMPYR LAECAILYRSNAQSRVLEEALLQASMPYRI RVLEEALLQASMPYRIYGGMRFFERQEIKD R V L Y R I 2 1 0 0 0 1 2 0 0 0 3 0 1 0 1 1 0 0 1 1 0 0 14 0 2 3 1618.8389 P03018 P03018 362 375 uvrD DNA helicase II yes yes 2 2.3809E-14 116.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8753700 2587800 1893000 0 0 1637900 2635000 0 0 4715 41 5168 28205;28206;28207;28208 21326;21327;21328;21329 21326 4 2587800 1937700 0 0 1975900 2919000 0 0 VLEIVLASLDEPR PVLAVAQRHRDVAERVLEIVLASLDEPRKP ERVLEIVLASLDEPRKPKPGLTRIKRNLYR R V L P R K 1 1 0 1 0 0 2 0 0 1 3 0 0 0 1 1 0 0 0 2 0 0 13 0 2 2 1452.8188 P0ACP1 P0ACP1 300 312 cra Catabolite repressor/activator yes yes 2 1.9926E-10 113.63 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 1 102050000 21308000 19951000 0 0 27236000 31804000 0 1751000 4716 217 5169 28209;28210;28211;28212;28213;28214;28215 21330;21331;21332;21333 21333 4 21308000 20422000 0 0 136130000 154730000 0 10048000 VLELINTPEMLNGVK TTYGGNPLASAVAGKVLELINTPEMLNGVK VLELINTPEMLNGVKQRHDWFVERLNTINH K V L V K Q 0 0 2 0 0 0 2 1 0 1 3 1 1 0 1 0 1 0 0 2 0 0 15 0 2 1 1668.912 P77581 P77581 295 309 astC Succinylornithine transaminase yes yes 2 3.665E-51 160.18 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 56585000 0 22416000 466720 0 11623000 22079000 0 0 4717 437 5170 28216;28217;28218;28219;28220 21334;21335;21336;21337 21335 4 0 22945000 3965600 0 14021000 24459000 0 0 VLENAEGDR TTNSCVAIMDGTTPRVLENAEGDRTTPSII DGTTPRVLENAEGDRTTPSIIAYTQDGETL R V L D R T 1 1 1 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 2 1 1001.4778 P0A6Y8 P0A6Y8 26 34 dnaK Chaperone protein DnaK yes yes 2 8.3351E-111 190.51 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 941250000 280350000 301280000 0 0 175470000 184150000 0 0 4718 86 5171 28221;28222;28223;28224;28225 21338;21339;21340;21341;21342;21343;21344 21344 5 282720000 308390000 0 0 211670000 203990000 0 0 VLENAEGDRTTPSIIAYTQDGETLVGQPAK TTNSCVAIMDGTTPRVLENAEGDRTTPSII AYTQDGETLVGQPAKRQAVTNPQNTLFAIK R V L A K R 3 1 1 2 0 2 3 3 0 2 2 1 0 0 2 1 4 0 1 2 0 0 30 1 3 5 3172.5888 P0A6Y8 P0A6Y8 26 55 dnaK Chaperone protein DnaK yes yes 3 9.4928E-109 165.48 By MS/MS By MS/MS By MS/MS 1 1 1 98653000 52256000 32496000 0 0 13901000 0 0 0 4719 86 5172 28226;28227;28228 21345;21346;21347 21345 3 52256000 33262000 0 0 16769000 0 0 0 VLENAEGDRTTPSIIAYTQDGETLVGQPAKR TTNSCVAIMDGTTPRVLENAEGDRTTPSII YTQDGETLVGQPAKRQAVTNPQNTLFAIKR R V L K R Q 3 2 1 2 0 2 3 3 0 2 2 1 0 0 2 1 4 0 1 2 0 0 31 2 3 5 3328.6899 P0A6Y8 P0A6Y8 26 56 dnaK Chaperone protein DnaK yes yes 4 1.8665E-97 155.8 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 267490000 124420000 114740000 0 0 12012000 16327000 0 0 4720 86 5173 28229;28230;28231;28232 21348;21349;21350;21351;21352 21348 5 124420000 117450000 0 0 14490000 18087000 0 0 VLEQSAESVPEYGK DIEPEQIHLAIKEARVLEQSAESVPEYGKA RVLEQSAESVPEYGKAVNIKTKRGVIKPRT R V L G K A 1 0 0 0 0 1 3 1 0 0 1 1 0 0 1 2 0 0 1 2 0 0 14 0 3 2 1534.7515 P0A9K3 P0A9K3 94 107 ybeZ PhoH-like protein yes yes 2 2.844E-11 100.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30900000 8911400 6474600 0 0 5644900 9869600 0 0 4721 168 5174 28233;28234;28235;28236 21353;21354;21355;21356 21355 3 8911400 6627400 0 0 6809400 10933000 0 0 VLESAIANAEHNDGADIDDLK ILTYTNKKAAVLVKKVLESAIANAEHNDGA ANAEHNDGADIDDLKVTKIFVDEGPSMKRI K V L L K V 4 0 2 4 0 0 2 1 1 2 2 1 0 0 0 1 0 0 0 1 0 0 21 0 2 4 2209.0499 P61175 P61175 50 70 rplV 50S ribosomal protein L22 yes yes 2;3 6.0459E-100 178.77 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 189800000 61368000 33535000 0 0 52013000 42884000 0 0 4722 385 5175 28237;28238;28239;28240;28241;28242;28243 21357;21358;21359;21360;21361;21362 21359 6 61368000 34327000 0 0 62743000 47506000 0 0 VLESAIANAEHNDGADIDDLKVTK ILTYTNKKAAVLVKKVLESAIANAEHNDGA EHNDGADIDDLKVTKIFVDEGPSMKRIMPR K V L T K I 4 0 2 4 0 0 2 1 1 2 2 2 0 0 0 1 1 0 0 2 0 0 24 1 2 4 2537.2609 P61175 P61175 50 73 rplV 50S ribosomal protein L22 yes yes 3;4 4.7085E-126 181.38 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 201860000 63715000 69414000 0 0 23747000 44981000 0 0 4723 385 5176 28244;28245;28246;28247;28248;28249;28250 21363;21364;21365;21366;21367;21368;21369 21365 7 63715000 71052000 0 0 28646000 49829000 0 0 VLFDNGQARLIRRRQTIEE ASMSSNYNSRPLLPEVLFDNGQARLIRRRQ NGQARLIRRRQTIEELLALELL________ E V L E E L 1 4 1 1 0 2 2 1 0 2 2 0 0 1 0 0 1 0 0 1 0 0 19 4 1 1 2313.2666 P00861 P00861 395 413 lysA Diaminopimelate decarboxylase yes yes 4;5 0.00053926 41.412 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 2 1 52678000 4523000 6538200 7300800 10306000 5673000 16263000 0 2074200 4724 28 5177 28251;28252;28253;28254;28255;28256;28257;28258 21370;21371;21372;21373 21373 4 69494000 99708000 62034000 78134000 87341000 246500000 0 11904000 VLGCYPSENVVPVDPT QKALKELGEITRSMKVLGCYPSENVVPVDP LGCYPSENVVPVDPT_______________ K V L P T - 0 0 1 1 1 0 1 1 0 0 1 0 0 0 3 1 1 0 1 4 0 0 16 0 1 3 1744.8342 P0A9J8 P0A9J8 371 386 pheA P-protein;Chorismate mutase;Prephenate dehydratase yes yes 2 1.9906E-10 85.355 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 109650000 26662000 34411000 0 0 24572000 24009000 0 0 4725 166 5178 28259;28260;28261;28262 21374;21375;21376;21377 21374 4 26662000 35223000 0 0 29641000 26596000 0 0 VLGKPQTDPTLE ______________________________ ______________________________ M V L L E W 0 0 0 1 0 1 1 1 0 0 2 1 0 0 2 0 2 0 0 1 0 0 12 1 0 2 1296.6925 P0ACJ8 P0ACJ8 2 13 crp cAMP-activated global transcriptional regulator CRP yes yes 2 5.0718E-18 126.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1 1 6108100000 583320000 443250000 1050700000 1136600000 403520000 372640000 903180000 1214800000 4726 213 5179;5180 28263;28264;28265;28266;28267;28268;28269;28270;28271 21378;21379;21380;21381;21382;21383;21384;21385 21379 8 8962600000 6759700000 8927800000 8617600000 6212500000 5647900000 6951100000 6971500000 VLGKPQTDPTLEWFLSHCHIHK ______________________________ DPTLEWFLSHCHIHKYPSKSTLIHQGEKAE M V L H K Y 0 0 0 1 1 1 1 1 3 1 3 2 0 1 2 1 2 1 0 1 0 0 22 1 1 2 2642.3428 P0ACJ8 P0ACJ8 2 23 crp cAMP-activated global transcriptional regulator CRP yes yes 4;5 7.4166E-100 173.77 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 1581400000 309020000 443650000 0 0 387710000 441000000 0 0 4727 213 5181;5182 28272;28273;28274;28275;28276;28277;28278;28279;28280;28281;28282;28283 21386;21387;21388;21389;21390;21391;21392;21393;21394;21395;21396;21397 21388 12 309020000 454130000 0 0 467700000 488530000 0 0 VLGPTTTTLAWK KARDIHTSTLELFEKVLGPTTTTLAWKKAR FEKVLGPTTTTLAWKKARLINCTFNEPQLA K V L W K K 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 0 4 1 0 1 0 0 12 0 0 2 1286.7234 P42596 P42596 158 169 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 3.6491E-35 144.77 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 318030000 103000000 76916000 0 0 68511000 69603000 0 0 4728 366 5183 28284;28285;28286;28287 21398;21399;21400;21401;21402 21402 5 103000000 78732000 0 0 82644000 77105000 0 0 VLGTDGFGR FAEQVRTYVPADDYRVLGTDGFGRSDSREN PADDYRVLGTDGFGRSDSRENLRHHFEVDA R V L G R S 0 1 0 1 0 0 0 3 0 0 1 0 0 1 0 0 1 0 0 1 0 0 9 0 0 0 920.47158 P0AFG8 P0AFG8 823 831 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0074758 52.716 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 17482000 4198600 5113200 0 0 4016100 4154500 0 0 4729 248 5184 28288;28289;28290;28291 21403;21404 21404 2 4198600 5233900 0 0 4844600 4602300 0 0 VLHHGPDNAAVR ARIQSIGGIYDGHCRVLHHGPDNAAVRIRQ HCRVLHHGPDNAAVRIRQQHPVTQFTDQLR R V L V R I 2 1 1 1 0 0 0 1 2 0 1 0 0 0 1 0 0 0 0 2 0 0 12 0 0 3 1284.6687 P27305 P27305 131 142 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 3 1.3679E-14 106.49 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45588000 0 0 0 0 25332000 20256000 0 0 4730 322 5185 28292;28293;28294;28295 21405;21406;21407;21408;21409 21405 5 0 0 0 0 30558000 22439000 0 0 VLHPLPR VLRASDLHNAKANMKVLHPLPRVDEIATDV HNAKANMKVLHPLPRVDEIATDVDKTPHAW K V L P R V 0 1 0 0 0 0 0 0 1 0 2 0 0 0 2 0 0 0 0 1 0 0 7 0 0 2 830.51266 P0A786 P0A786 264 270 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 0.0030679 74.832 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 20624000 4339400 7880200 0 0 4197100 4206900 0 0 4731 97 5186 28296;28297;28298;28299 21410;21411 21411 2 4339400 8066200 0 0 5063000 4660300 0 0 VLHSLEQALSK IIDFIDMNNEDHRRRVLHSLEQALSKDRVK HRRRVLHSLEQALSKDRVKTSVNGFSALGL R V L S K D 1 0 0 0 0 1 1 0 1 0 3 1 0 0 0 2 0 0 0 1 0 0 11 0 1 1 1223.6874 P0A9J0 P0A9J0 360 370 rng Ribonuclease G yes yes 2;3 5.7921E-05 79.659 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 32939000 10854000 12125000 0 0 4309000 5651100 0 0 4732 165 5187 28300;28301;28302;28303;28304;28305;28306;28307 21412;21413;21414;21415 21414 4 10854000 12411000 0 0 5198000 6260100 0 0 VLHVIPQEYAIDYQEGIK VVHTAKSVRVRDEHRVLHVIPQEYAIDYQE VIPQEYAIDYQEGIKNPVGLSGVRMQAKVH R V L I K N 1 0 0 1 0 2 2 1 1 3 1 1 0 0 1 0 0 0 2 2 0 0 18 0 2 2 2114.1048 P0ABH0 P0ABH0 127 144 ftsA Cell division protein FtsA yes yes 2;3 1.0305E-52 120.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 2 174920000 36515000 47451000 0 0 50708000 40243000 0 0 4733 199 5188 28308;28309;28310;28311;28312;28313;28314;28315 21416;21417;21418;21419;21420 21417 5 36515000 48571000 0 0 93005000 44580000 0 0 VLHVIPQEYAIDYQEGIKNPVGLSGVR VVHTAKSVRVRDEHRVLHVIPQEYAIDYQE YQEGIKNPVGLSGVRMQAKVHLITCHNDMA R V L V R M 1 1 1 1 0 2 2 3 1 3 2 1 0 0 2 1 0 0 2 4 0 0 27 1 2 3 2993.5975 P0ABH0 P0ABH0 127 153 ftsA Cell division protein FtsA yes yes 3;4 2.362E-75 150.18 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 297730000 60764000 73117000 0 0 90850000 73003000 0 0 4734 199 5189 28316;28317;28318;28319;28320;28321;28322;28323 21421;21422;21423;21424;21425;21426;21427;21428 21421 8 60764000 74842000 0 0 109590000 80871000 0 0 VLICPHLPADE LMMQIFTSQGVQFDEVLICPHLPADECDCR QFDEVLICPHLPADECDCRKPKVKLVERYL E V L D E C 1 0 0 1 1 0 1 0 1 1 2 0 0 0 2 0 0 0 0 1 0 0 11 0 0 3 1262.6329 P06987 P06987 90 100 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 0.00060353 83.265 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 112320000 6172400 4431300 24635000 27809000 4240400 6081900 14732000 24221000 4735 55 5190 28324;28325;28326;28327;28328;28329;28330;28331 21429;21430;21431;21432;21433;21434 21430 6 94838000 67577000 209320000 210840000 65285000 92181000 113380000 139000000 VLILGVNGFIGNHLTER RLNSQPACTARRRTRVLILGVNGFIGNHLT ILGVNGFIGNHLTERLLREDHYEVYGLDIG R V L E R L 0 1 2 0 0 0 1 3 1 2 3 0 0 1 0 0 1 0 0 2 0 0 17 0 1 0 1851.0367 P77398 P77398 318 334 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3 3.3869E-97 176.51 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 4736 432 5191 28332;28333;28334 21435;21436;21437 21436 3 0 0 0 0 0 0 0 0 VLKKMKKTAE EVKGQKMAPPQISAEVLKKMKKTAEDYLGE QISAEVLKKMKKTAEDYLGEPVTEAVITVP E V L A E D 1 0 0 0 0 0 1 0 0 0 1 4 1 0 0 0 1 0 0 1 0 0 10 4 0 1 1174.7108 P0A6Y8 P0A6Y8 119 128 dnaK Chaperone protein DnaK yes yes 2;3 0.00013653 91.549 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 3 3 2 307580000 51090000 62288000 7931200 21401000 10368000 9005700 131190000 14313000 4737 86 5192;5193 28335;28336;28337;28338;28339;28340;28341;28342;28343;28344;28345;28346;28347;28348;28349;28350 21438;21439;21440;21441;21442;21443;21444;21445;21446;21447 21438 97 8 784980000 949900000 67391000 162250000 159620000 134550000 1009700000 82138000 VLKKMKKTAEDYLGEPVTE EVKGQKMAPPQISAEVLKKMKKTAEDYLGE MKKTAEDYLGEPVTEAVITVPAYFNDAQRQ E V L T E A 1 0 0 1 0 0 3 1 0 0 2 4 1 0 1 0 2 0 1 2 0 0 19 4 2 2 2178.1606 P0A6Y8 P0A6Y8 119 137 dnaK Chaperone protein DnaK yes yes 3;4 3.1006E-25 95.347 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 3 4 4 2 3 1083200000 64270000 58174000 85367000 150760000 68687000 75316000 222980000 357610000 4738 86 5194;5195 28351;28352;28353;28354;28355;28356;28357;28358;28359;28360;28361;28362;28363;28364;28365;28366;28367;28368;28369;28370;28371;28372;28373;28374 21448;21449;21450;21451;21452;21453;21454;21455;21456;21457;21458;21459;21460;21461;21462;21463;21464;21465;21466;21467;21468;21469;21470;21471;21472;21473;21474;21475;21476;21477;21478;21479 21465 97 32 987490000 887170000 725350000 1143000000 1057500000 1141500000 1716100000 2052300000 VLKPELLTEIAGER EMMADMAEVDDSGKRVLKPELLTEIAGERS RVLKPELLTEIAGERSARFDNKGDRFYDLI R V L E R S 1 1 0 0 0 0 3 1 0 1 3 1 0 0 1 0 1 0 0 1 0 0 14 1 3 2 1566.8981 P0AAZ4 P0AAZ4 231 244 rarA Replication-associated recombination protein A yes yes 2;3 3.2568E-11 104.79 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 113140000 34878000 29548000 0 0 22910000 25804000 0 0 4739 189 5196 28375;28376;28377;28378;28379;28380;28381;28382 21480;21481;21482;21483;21484;21485 21485 6 34878000 30246000 0 0 27637000 28585000 0 0 VLLDGEKVGE HWQAKKLTTDASEWEVLLDGEKVGEVKWSL ASEWEVLLDGEKVGEVKWSLVGEHNMHNGL E V L G E V 0 0 0 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 0 2 0 0 10 1 1 0 1057.5655 P37773 P37773 261 270 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2 0.0026369 67.993 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 24917000 2093400 1801800 6246700 0 0 2057300 5886700 6831200 4740 360 5197 28383;28384;28385;28386;28387;28388 21486;21487 21487 2 2093400 1844300 53078000 0 0 2279000 45306000 39203000 VLLPAFPDIR GALPAAQIADGVDARVLLPAFPDIRRGVTD GVDARVLLPAFPDIRRGVTDAQVVSRRDTF R V L I R R 1 1 0 1 0 0 0 0 0 1 2 0 0 1 2 0 0 0 0 1 0 0 10 0 0 3 1139.6703 P0A6U8 P0A6U8 39 48 glgA Glycogen synthase yes yes 2 7.1175E-11 124.23 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 151370000 48884000 56444000 0 0 22590000 23450000 0 0 4741 83 5198 28389;28390;28391;28392 21488;21489;21490;21491 21488 4 48884000 57776000 0 0 27250000 25977000 0 0 VLLSGNHA HYTRPEVLEGMEVPPVLLSGNHAEIRRWRL EGMEVPPVLLSGNHAEIRRWRLKQSLGRTW P V L H A E 1 0 1 0 0 0 0 1 1 0 2 0 0 0 0 1 0 0 0 1 0 0 8 0 0 0 809.43955 P0A873 P0A873 195 202 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 0.0047546 75.311 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 27115000 7066500 5260500 0 0 8881000 5907400 0 0 4742 140 5199 28393;28394;28395;28396 21492 21492 1 42657000 31484000 0 0 12644000 8421000 0 0 VLMKGGHLDDEQSP MLEQGRSLLAMGCGAVLMKGGHLDDEQSPD AVLMKGGHLDDEQSPDWLFTREGEQRFTAP A V L S P D 0 0 0 2 0 1 1 2 1 0 2 1 1 0 1 1 0 0 0 1 0 0 14 1 1 0 1524.7242 P76422 P76422 173 186 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase yes yes 2;3 2.7243E-12 59.426 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 52637000 5401900 4670700 0 0 14532000 28032000 0 0 4743 425 5200 28397;28398;28399;28400;28401;28402;28403 21493;21494;21495;21496 21494 4 32609000 27954000 0 0 20689000 39960000 0 0 VLNAGDGSNQHP EGAARLATEFSGNVPVLNAGDGSNQHPTQT NVPVLNAGDGSNQHPTQTLLDLFTIQETQG P V L H P T 1 0 2 1 0 1 0 2 1 0 1 0 0 0 1 1 0 0 0 1 0 0 12 0 0 1 1207.5582 P0A786 P0A786 125 136 pyrB Aspartate carbamoyltransferase catalytic chain yes yes 2 8.0921E-05 68.735 By MS/MS By MS/MS By MS/MS 1 1 1 3560700 551280 484420 0 0 0 2525000 0 0 4744 97 5201 28404;28405;28406 21497 21497 1 3327800 2899200 0 0 0 3599400 0 0 VLNQFDDAGIVTR LIDMGEEIGLATVYRVLNQFDDAGIVTRHN YRVLNQFDDAGIVTRHNFEGGKSVFELTQQ R V L T R H 1 1 1 2 0 1 0 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 13 0 0 1 1446.7467 P0A9A9 P0A9A9 58 70 fur Ferric uptake regulation protein yes yes 2 5.0207E-139 213.34 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 4175100000 1110000000 1082700000 0 0 814930000 1167500000 0 0 4745 162 5202 28407;28408;28409;28410 21498;21499;21500;21501;21502;21503;21504 21503 7 1110000000 1108200000 0 0 983050000 1293300000 0 0 VLQALLSR SIAGSVAVGKSTTARVLQALLSRWPEHRRV GKSTTARVLQALLSRWPEHRRVELITTDGF R V L S R W 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 8 0 0 1 898.56 P0A6I3 P0A6I3 107 114 coaA Pantothenate kinase yes yes 2 0.002676 77.923 By MS/MS By matching By matching By matching 1 1 1 1 17804000 7395300 3055800 0 0 4569400 2783600 0 0 4746 72 5203 28411;28412;28413;28414 21505 21505 1 7395300 3127900 0 0 5512100 3083600 0 0 VLQEPDNHHVSAE KAGLKVTLPRLKILEVLQEPDNHHVSAEDL LEVLQEPDNHHVSAEDLYKRLIDMGEEIGL E V L A E D 1 0 1 1 0 1 2 0 2 0 1 0 0 0 1 1 0 0 0 2 0 0 13 0 1 2 1473.6848 P0A9A9 P0A9A9 25 37 fur Ferric uptake regulation protein yes yes 2;3 1.9275E-33 149.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 7046100000 237460000 195360000 1485300000 1726500000 64821000 67422000 1571200000 1698000000 4747 162 5204 28415;28416;28417;28418;28419;28420;28421;28422;28423;28424;28425;28426;28427;28428;28429;28430 21506;21507;21508;21509;21510;21511;21512;21513;21514;21515;21516;21517;21518 21508 13 3648500000 2979300000 12620000000 13090000000 997990000 1021900000 12092000000 9744800000 VLQLINAYR SSTISDPDTNVKQVKVLQLINAYRFRGHQH NVKQVKVLQLINAYRFRGHQHANLDPLGLW K V L Y R F 1 1 1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 9 0 0 1 1088.6342 P0AFG3 P0AFG3 92 100 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0011792 104.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 206170000 69160000 55033000 0 0 39593000 42386000 0 0 4748 246 5205 28431;28432;28433;28434 21519;21520;21521;21522 21520 4 69160000 56332000 0 0 47761000 46954000 0 0 VLQLQFIDPDVR YLHGFDSNSPGNHEKVLQLQFIDPDVRLIS HEKVLQLQFIDPDVRLISYSTRHPKHDMQH K V L V R L 0 1 0 2 0 2 0 0 0 1 2 0 0 1 1 0 0 0 0 2 0 0 12 0 0 1 1441.7929 P0A8E1 P0A8E1 19 30 ycfP UPF0227 protein YcfP yes yes 2 2.2745E-183 231.23 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1976600000 529990000 486920000 0 0 456590000 503120000 0 0 4749 143 5206 28435;28436;28437;28438;28439;28440 21523;21524;21525;21526;21527 21523 5 543990000 498410000 0 0 550790000 557340000 0 0 VLRPVADE LGQENFDAAEKAAREVLRPVADELRYHGWK AEKAAREVLRPVADELRYHGWKVCVGASGT E V L D E L 1 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 8 1 0 2 897.49198 P25552 P25552 192 199 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 0.0047388 89.55 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 39081000 4985900 3532800 0 13543000 1881700 2192500 0 12945000 4750 316 5207 28441;28442;28443;28444;28445;28446;28447 21528;21529;21530;21531;21532 21531 5 76608000 53876000 0 102680000 28970000 33231000 0 74287000 VLRRDSR GRQKAVIKARREAKRVLRRDSRSHKQREEE KARREAKRVLRRDSRSHKQREEESVTSLVQ R V L S R S 0 3 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 7 2 0 0 900.52535 P0A9K1 P0A9K1 109 115 phoH Protein PhoH yes yes 2 0.0052079 51.688 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 4751 167 5208 28448;28449;28450 21533;21534 21533 19 0 0 0 0 0 0 0 0 0 VLRSFLDD EAKALRKLRHPSRSEVLRSFLDD_______ RHPSRSEVLRSFLDD_______________ E V L D D - 0 1 0 2 0 0 0 0 0 0 2 0 0 1 0 1 0 0 0 1 0 0 8 1 0 0 963.50255 P00579 P00579 606 613 rpoD RNA polymerase sigma factor RpoD yes yes 2 0.0027858 75.109 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 509860000 16561000 21686000 85147000 89416000 0 0 117570000 179480000 4752 27 5209 28451;28452;28453;28454;28455;28456;28457;28458 21535;21536;21537;21538;21539;21540 21537 5 254450000 330710000 723480000 677910000 0 0 904870000 1030000000 VLSSSGEKSKEE HLRAELKSLSDTLEEVLSSSGEKSKEELSK LEEVLSSSGEKSKEELSKIRSKAEQALKQS E V L E E L 0 0 0 0 0 0 3 1 0 0 1 2 0 0 0 4 0 0 0 1 0 0 12 2 2 0 1278.6303 P64581 P64581 24 35 yqjD Uncharacterized protein YqjD yes yes 2 0.01353 36.334 By MS/MS 1 0 0 0 0 0 0 0 0 0 4753 397 5210 28459 21541 21541 1 0 0 0 0 0 0 0 0 VLTEAAVAGK TESFISAASFQETTRVLTEAAVAGKRDELR QETTRVLTEAAVAGKRDELRGLKENVIVGR R V L G K R 3 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 10 0 1 3 957.5495 P0A8T7 P0A8T7 1331 1340 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.00058282 80.438 By matching By MS/MS By matching By MS/MS 1 1 1 1 35531000 9076200 8116700 0 0 8470700 9867400 0 0 4754 153 5211 28460;28461;28462;28463 21542;21543 21543 2 9076200 8308300 0 0 10218000 10931000 0 0 VLTETIFELMGITPTLHGGQAQAK GFPVVVHGVSEDPTRVLTETIFELMGITPT MGITPTLHGGQAQAKLDEHQPVFMPVGAFC R V L A K L 2 0 0 0 0 2 2 3 1 2 3 1 1 1 1 0 4 0 0 1 0 0 24 0 2 3 2554.3465 P30177 P30177 124 147 ybiB Uncharacterized protein YbiB yes yes 3 0.00019126 35.174 By matching By MS/MS By matching 1 1 1 97265000 0 5826200 0 0 51278000 40161000 0 0 4755 332 5212 28464;28465;28466 21544 21544 1 0 5963700 0 0 61857000 44489000 0 0 VLTGGVDANALHRPK RLARAYNTVVPASGKVLTGGVDANALHRPK VLTGGVDANALHRPKRFFGAARNVEEGGSL K V L P K R 2 1 1 1 0 0 0 2 1 0 2 1 0 0 1 0 1 0 0 2 0 0 15 1 0 3 1546.858 P0AG30 P0AG30 284 298 rho Transcription termination factor Rho yes yes 3 1.5489E-12 103.76 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 34740000 7647000 9156300 0 0 9656900 8279600 0 0 4756 256 5213 28467;28468;28469;28470;28471 21545;21546;21547;21548 21548 4 7647000 9372500 0 0 29653000 9171900 0 0 VLVATDIAAR ARTRALADFKSGDIRVLVATDIAARGLDIE SGDIRVLVATDIAARGLDIEELPHVVNYEL R V L A R G 3 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 2 0 0 10 0 0 3 1027.6026 P25888 P25888 298 307 rhlE ATP-dependent RNA helicase RhlE yes yes 2 1.4186E-20 138.54 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 586220000 180540000 127100000 0 0 124560000 154020000 0 0 4757 318 5214 28472;28473;28474;28475;28476 21549;21550;21551;21552 21550 4 180540000 130100000 0 0 150260000 170620000 0 0 VLVLGEDVTQTGARVA GIYTPALREIESYDAVLVLGEDVTQTGARV LVLGEDVTQTGARVALAVRQAVKGKAREMA A V L V A L 2 1 0 1 0 1 1 2 0 0 2 0 0 0 0 0 2 0 0 4 0 0 16 1 1 1 1626.8941 P33602 P33602 375 390 nuoG NADH-quinone oxidoreductase subunit G yes yes 2 2.1221E-06 74.611 By MS/MS By MS/MS 1 1 5236300 0 0 0 0 3337400 1898900 0 0 4758 345 5215 28477;28478 21553;21554;21555 21553 3 0 0 0 0 4751400 2706900 0 0 VLVTGATSGLGR ______________________________ ______________________________ K V L G R N 1 1 0 0 0 0 0 3 0 0 2 0 0 0 0 1 2 0 0 2 0 0 12 0 0 1 1129.6455 P75821 P75821 3 14 ybjS Uncharacterized protein YbjS yes yes 2 1.762E-06 83.869 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31369000 8633400 6719500 0 0 7084600 8931600 0 0 4759 408 5216 28479;28480;28481;28482 21556;21557;21558;21559 21559 4 8633400 6878000 0 0 8546100 9894300 0 0 VLYDAEISQIHQSVTDTNVILSMDNSR QSKVDLLNQEIEFLKVLYDAEISQIHQSVT SVTDTNVILSMDNSRNLDLDSIIAEVKAQY K V L S R N 1 1 2 3 0 2 1 0 1 3 2 0 1 0 0 4 2 0 1 3 0 0 27 0 1 1 3047.487 CON__P35908v2;CON__P35908 CON__P35908v2 315 341 yes no 3 4.943E-166 204.79 By matching By MS/MS By MS/MS 1 2 2 151320000 4312700 0 0 0 77315000 69692000 0 0 + 4760 16 5217;5218 28483;28484;28485;28486;28487 21560;21561;21562;21563 21563 30 4 4312700 0 0 0 93265000 77203000 0 0 VLYEMDGVPEELAR KGNVEYWVALIQPGKVLYEMDGVPEELARE KVLYEMDGVPEELAREAFKLAAAKLPIKTT K V L A R E 1 1 0 1 0 0 3 1 0 0 2 0 1 0 1 0 0 0 1 2 0 0 14 0 3 2 1619.7865 P0ADY7 P0ADY7 101 114 rplP 50S ribosomal protein L16 yes yes 2 1.4117E-62 194.5 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 277040000 68609000 63657000 0 0 75074000 69698000 0 0 4761 229 5219;5220 28488;28489;28490;28491;28492;28493;28494;28495 21564;21565;21566;21567;21568;21569 21568 208 6 68609000 65160000 0 0 90562000 77210000 0 0 VLYGLNETRP QFWHDFLGNAPTIPPVLYGLNETRPSQDKD PTIPPVLYGLNETRPSQDKDDEQEVFYTTA P V L R P S 0 1 1 0 0 0 1 1 0 0 2 0 0 0 1 0 1 0 1 1 0 0 10 1 1 0 1160.619 P0ACI0 P0ACI0 177 186 rob Right origin-binding protein yes yes 2 0.0011583 87.308 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 51676000 571330 566250 0 0 26653000 23886000 0 0 4762 211 5221 28496;28497;28498;28499;28500 21570;21571 21571 2 3448900 3389000 0 0 36430000 34049000 0 0 VMALINEAAAR ALSLVEAMVEANGERVMALINEAAARGIEW NGERVMALINEAAARGIEWEALLVEMLGLL R V M A R G 4 1 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 11 0 1 4 1157.6227 P06710 P06710 264 274 dnaX DNA polymerase III subunit tau yes yes 2 1.523E-23 140.14 By MS/MS By MS/MS By matching 1 1 1 66197000 24220000 15537000 0 0 26440000 0 0 0 4763 51 5222 28501;28502;28503 21572;21573 21573 2 24220000 15904000 0 0 31894000 0 0 0 VMCHDAVEVLHK ACLASAHEEGLSNLRVMCHDAVEVLHKMIP NLRVMCHDAVEVLHKMIPDNSLRMVQLFFP R V M H K M 1 0 0 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 0 3 0 0 12 0 1 1 1436.6904 P0A8I5 P0A8I5 117 128 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 3;4 2.2097E-19 127.56 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 306380000 94221000 78027000 0 0 60979000 73152000 0 0 4764 144 5223;5224 28504;28505;28506;28507;28508;28509;28510;28511;28512;28513;28514;28515 21574;21575;21576;21577;21578;21579;21580;21581;21582;21583;21584;21585 21578 142 12 94221000 79869000 0 0 73559000 81037000 0 0 VMENLLLESADK VVELDYPVDISEVSRVMENLLLESADKLLR VSRVMENLLLESADKLLRYKGMLWIDGEPN R V M D K L 1 0 1 1 0 0 2 0 0 0 3 1 1 0 0 1 0 0 0 1 0 0 12 0 2 1 1360.6908 P24203 P24203 243 254 yjiA Uncharacterized GTP-binding protein YjiA yes yes 2 4.6094E-07 96.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 21532000 7336000 5141100 0 0 4557800 4497200 0 0 4765 311 5225 28516;28517;28518;28519 21586;21587;21588;21589 21589 4 7336000 5262500 0 0 5498000 4981900 0 0 VMIDDSSVVIGDVR VLRPYRDLFPQIGQRVMIDDSSVVIGDVRL RVMIDDSSVVIGDVRLADDVGIWPLVVIRG R V M V R L 0 1 0 3 0 0 0 1 0 2 0 0 1 0 0 2 0 0 0 4 0 0 14 0 0 0 1503.7603 P0A9W9 P0A9W9 19 32 yrdA Protein YrdA yes yes 2 4.2652E-63 169.65 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 227200000 52502000 56773000 0 0 57209000 60717000 0 0 4766 179 5226;5227 28520;28521;28522;28523;28524;28525;28526;28527 21590;21591;21592;21593;21594;21595;21596;21597 21597 172 8 52502000 58113000 0 0 69011000 67261000 0 0 VMIHQPLGGYQGQATDIEIHAR TAGAKGKRFCLPNSRVMIHQPLGGYQGQAT GGYQGQATDIEIHAREILKVKGRMNELMAL R V M A R E 2 1 0 1 0 3 1 3 2 3 1 0 1 0 1 0 1 0 1 1 0 0 22 0 1 3 2433.2223 P0A6G7 P0A6G7 133 154 clpP ATP-dependent Clp protease proteolytic subunit yes yes 4 0.00014381 40.381 By MS/MS 1 15037000 0 0 0 0 0 15037000 0 0 4767 69 5228 28528 21598 21598 1 0 0 0 0 0 16658000 0 0 VMLHGCTIGNR GNPLTIGEDVTVGHKVMLHGCTIGNRVLVG VGHKVMLHGCTIGNRVLVGMGSILLDGAIV K V M N R V 0 1 1 0 1 0 0 2 1 1 1 0 1 0 0 0 1 0 0 1 0 0 11 0 0 0 1256.6118 P0A9W9 P0A9W9 93 103 yrdA Protein YrdA yes yes 3 5.1617E-05 80.979 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 56670000 11681000 19551000 0 0 13688000 11751000 0 0 4768 179 5229 28529;28530;28531;28532;28533 21599;21600;21601;21602 21600 4 11681000 20012000 0 0 16850000 13017000 0 0 VMPFFEQHK MTKFEYWAMPHKDEKVMPFFEQHKSLFRNP PHKDEKVMPFFEQHKSLFRNPKKLADVVAS K V M H K S 0 0 0 0 0 1 1 0 1 0 0 1 1 2 1 0 0 0 0 1 0 0 9 0 1 1 1161.5641 P31658 P31658 116 124 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 3 4.3783E-07 103.87 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 155250000 37247000 37030000 0 0 40408000 40565000 0 0 4769 335 5230 28534;28535;28536;28537 21603;21604;21605;21606 21603 4 37247000 37904000 0 0 48745000 44937000 0 0 VMQAQGSQLTNK EHIELIASENYTSPRVMQAQGSQLTNKYAE SPRVMQAQGSQLTNKYAEGYPGKRYYGGCE R V M N K Y 1 0 1 0 0 3 0 1 0 0 1 1 1 0 0 1 1 0 0 1 0 0 12 0 0 1 1303.6554 P0A825 P0A825 43 54 glyA Serine hydroxymethyltransferase yes yes 2 2.1357E-13 119.68 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 15362000 3653600 5304300 0 0 3556900 2847300 0 0 4770 136 5231 28538;28539;28540;28541 21607;21608;21609;21610 21610 4 3653600 5429500 0 0 4290700 3154200 0 0 VMSSIDGYKNLSE HMATDWEPYAEHMLEVMSSIDGYKNLSESN LEVMSSIDGYKNLSESNDYVPRPASRPVTK E V M S E S 0 0 1 1 0 0 1 1 0 1 1 1 1 0 0 3 0 0 1 1 0 0 13 1 0 0 1441.6759 P0A8I5 P0A8I5 191 203 trmB tRNA (guanine-N(7)-)-methyltransferase yes yes 2 2.1153E-14 118.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 1 2 371340000 34697000 36830000 41742000 53917000 28101000 31730000 35024000 109300000 4771 144 5232;5233 28542;28543;28544;28545;28546;28547;28548;28549;28550;28551;28552;28553;28554 21611;21612;21613;21614;21615;21616;21617;21618 21611 143 8 533110000 561670000 354680000 408780000 432640000 480920000 269560000 627250000 VMSTGQTYNADR IRIKNGTLRKGDKVKVMSTGQTYNADRLGI KVKVMSTGQTYNADRLGIFTPKQVDRTELK K V M D R L 1 1 1 1 0 1 0 1 0 0 0 0 1 0 0 1 2 0 1 1 0 0 12 0 0 1 1341.5983 P60785 P60785 225 236 lepA Elongation factor 4 yes yes 2 0.00019999 51.268 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 6123700 0 2348800 0 0 2316600 1458300 0 0 4772 384 5234 28555;28556;28557;28558 21619;21620 21619 2 0 2404300 0 0 2794500 1615500 0 0 VMTVGTHGTTYGGNPLASAVAGK GFPVGALLATEECARVMTVGTHGTTYGGNP TTYGGNPLASAVAGKVLELINTPEMLNGVK R V M G K V 3 0 1 0 0 0 0 5 1 0 1 1 1 0 1 1 4 0 1 3 0 0 23 0 0 4 2188.0947 P77581 P77581 272 294 astC Succinylornithine transaminase yes yes 3 5.0886E-86 166.35 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 497410000 120930000 143860000 0 0 105280000 127340000 0 0 4773 437 5235;5236 28559;28560;28561;28562;28563;28564 21621;21622;21623;21624;21625;21626 21624 339 6 120930000 147260000 0 0 127000000 141070000 0 0 VMVKGPGPGRE RCADAVKEYGIKNLEVMVKGPGPGRESTIR KNLEVMVKGPGPGRESTIRALNAAGFRITN E V M R E S 0 1 0 0 0 0 1 3 0 0 0 1 1 0 2 0 0 0 0 2 0 0 11 2 0 2 1125.5965 P0A7R9 P0A7R9 84 94 rpsK 30S ribosomal protein S11 yes yes 2;3 2.2427E-06 98.033 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 4 4 4 4 1230000000 83716000 84423000 211870000 208310000 74452000 71914000 202180000 293130000 4774 121 5237;5238 28565;28566;28567;28568;28569;28570;28571;28572;28573;28574;28575;28576;28577;28578;28579;28580;28581;28582;28583;28584;28585;28586;28587;28588;28589;28590;28591;28592;28593;28594;28595;28596 21627;21628;21629;21630;21631;21632;21633;21634;21635;21636;21637;21638;21639;21640;21641;21642;21643;21644;21645;21646;21647;21648;21649;21650;21651;21652;21653 21641 121 26 1286300000 1287500000 1800300000 1579300000 1146300000 1090000000 1556000000 1682200000 VMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIE SLRVAHILYHNPRFEVMVPGGTLRSHNSGI DFRADYLVTSVGAIESDGALMEFDVNEANV E V M I E S 5 2 1 2 0 0 1 5 1 3 2 0 1 2 2 5 2 0 1 5 0 0 40 2 0 7 4061.068 P32144 P32144 142 181 yihW Uncharacterized HTH-type transcriptional regulator YihW yes yes 6 0.023736 0.28268 By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 1 1 107720000 0 18891000 5605100 0 22069000 0 2259900 58893000 4775 339 5239 28597;28598;28599;28600;28601;28602 21654 21654 1 0 288090000 47625000 0 339770000 0 17393000 337980000 VNAEYVEAFTK DVFYLHSRLLERAARVNAEYVEAFTKGEVK RAARVNAEYVEAFTKGEVKGKTGSLTALPI R V N T K G 2 0 1 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 1 2 0 0 11 0 2 2 1269.6241 P0ABB0 P0ABB0 304 314 atpA ATP synthase subunit alpha yes yes 2 0.0069172 52.6 By MS/MS By matching By matching 1 1 1 27960000 7824300 0 0 0 6987600 13148000 0 0 4776 193 5240 28603;28604;28605 21655 21655 0 7824300 0 0 0 8429200 14565000 0 0 VNAHLTAPLSRE LKSTWVTPSAEAAAEVNAHLTAPLSREASG AAEVNAHLTAPLSREASGEDLLRRPEMTYE E V N R E A 2 1 1 0 0 0 1 0 1 0 2 0 0 0 1 1 1 0 0 1 0 0 12 1 0 3 1306.6993 P0A6U3 P0A6U3 495 506 mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG yes yes 3 0.0085853 41.092 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 1 31329000 4278500 4012300 0 6731300 781240 1469600 5893200 8162800 4777 82 5241 28606;28607;28608;28609;28610;28611;28612;28613;28614 21656 21656 1 47230000 49728000 0 51034000 12028000 22274000 45356000 46845000 VNAHPHVSE GIAHTRWATHGEPSEVNAHPHVSEHIVVVH HGEPSEVNAHPHVSEHIVVVHNGIIENHEP E V N S E H 1 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 0 2 0 0 9 0 0 2 988.47264 P17169 P17169 84 92 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 8.5139E-36 157.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 2 2 713750000 40612000 36419000 108080000 131320000 27804000 25017000 138480000 206020000 4778 288 5242 28615;28616;28617;28618;28619;28620;28621;28622;28623;28624;28625;28626;28627;28628;28629 21657;21658;21659;21660;21661;21662;21663 21657 6 618400000 549840000 918300000 995580000 428060000 365610000 1065800000 1182300000 VNDEGIIEDAR VGAPACGDVMKLQIKVNDEGIIEDARFKTY LQIKVNDEGIIEDARFKTYGCGSAIASSSL K V N A R F 1 1 1 2 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 11 0 2 1 1229.5888 P0ACD4 P0ACD4 47 57 iscU Iron-sulfur cluster assembly scaffold protein IscU yes yes 2 0.0016626 65.5 By matching By MS/MS By MS/MS 1 1 1 17668000 5561800 7187600 0 0 0 4918700 0 0 4779 209 5243 28630;28631;28632 21664;21665 21664 2 5561800 7357200 0 0 0 5448800 0 0 VNDHLPEDIVDSDQIE LVTRGKEQGYLTYAEVNDHLPEDIVDSDQI NDHLPEDIVDSDQIEDIIQMINDMGIQVME E V N I E D 0 0 1 4 0 1 2 0 1 2 1 0 0 0 1 1 0 0 0 2 0 0 16 0 1 1 1836.8378 P00579 P00579 27 42 rpoD RNA polymerase sigma factor RpoD yes yes 2 2.5078E-07 74.76 By MS/MS By MS/MS By matching 1 1 1 11449000 4574400 4195000 0 2679800 0 0 0 0 4780 27 5244 28633;28634;28635 21666;21667 21667 2 70284000 63974000 0 20317000 0 0 0 0 VNDQEISR VSGYLIGGGNNYAAKVNDQEISRGQFENAF GNNYAAKVNDQEISRGQFENAFNSERNRMQ K V N S R G 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 8 0 1 0 959.46722 P0ADY1 P0ADY1 45 52 ppiD Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.0046719 48.794 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4781 227 5245 28636;28637 21668;21669 21668 2 0 0 0 0 0 0 0 0 VNELAEE SRIKQHVRFGSVRDEVNELAEELGADVVVI RFGSVRDEVNELAEELGADVVVIGSRNPSI E V N E E L 1 0 1 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 7 0 2 1 802.37086 P39177 P39177 97 103 uspG Universal stress protein G yes yes 1 0.023639 4.1196 By MS/MS By MS/MS By matching By matching 2 2 1 3 25389000 4633000 5116600 0 0 8564600 7074400 0 0 4782 362 5246 28638;28639;28640;28641;28642;28643;28644;28645 21670 21670 1 57441000 60155000 0 0 131860000 84986000 0 0 VNEVNFDKPENAR IRPPKEGERYFALLKVNEVNFDKPENARNK LKVNEVNFDKPENARNKILFENLTPLHANS K V N A R N 1 1 3 1 0 0 2 0 0 0 0 1 0 1 1 0 0 0 0 2 0 0 13 1 2 2 1530.7427 P0AG30 P0AG30 116 128 rho Transcription termination factor Rho yes yes 3 1.3547E-09 107.65 By matching By MS/MS 1 1 16145000 7877800 0 0 0 0 8267500 0 0 4783 256 5247 28646;28647 21671 21671 1 7877800 0 0 0 0 9158600 0 0 VNPGFGHGHSQK DQLGQVSPGHRVWLRVNPGFGHGHSQKTNT WLRVNPGFGHGHSQKTNTGGENSKHGIWYT R V N Q K T 0 0 1 0 0 1 0 3 2 0 0 1 0 1 1 1 0 0 0 1 0 0 12 0 0 1 1263.6109 P00861 P00861 143 154 lysA Diaminopimelate decarboxylase yes yes 2;3 0.0014623 48.948 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 76825000 26279000 26669000 0 0 12914000 10963000 0 0 4784 28 5248 28648;28649;28650;28651;28652;28653;28654;28655 21672;21673;21674;21675 21674 4 26279000 27298000 0 0 15579000 12144000 0 0 VNQDLKYAGEPTRVE IGRDNEIYQFASIGEVNQDLKYAGEPTRVE VNQDLKYAGEPTRVEIGDRNRIRESVTIHR E V N V E I 1 1 1 1 0 1 2 1 0 0 1 1 0 0 1 0 1 0 1 2 0 0 15 2 1 2 1717.8635 P0A722 P0A722 71 85 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2;3 1.1372E-09 65.704 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 1 1 126080000 10703000 9415900 17980000 27706000 7445500 7105400 23844000 21878000 4785 92 5249 28656;28657;28658;28659;28660;28661;28662;28663;28664;28665;28666 21676;21677;21678;21679;21680;21681 21680 6 164450000 143590000 152770000 210050000 114630000 107690000 183510000 125550000 VNQSDISDAQIK MKRALDNFKAVLDLRVNQSDISDAQIKKII DLRVNQSDISDAQIKKIIAVIDRAAFDITQ R V N I K K 1 0 1 2 0 2 0 0 0 2 0 1 0 0 0 2 0 0 0 1 0 0 12 0 0 1 1316.6572 P64588 P64588 179 190 yqjI Transcriptional regulator YqjI yes yes 2 3.8911E-138 209.73 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 750540000 203050000 153510000 0 0 213650000 180330000 0 0 4786 398 5250 28667;28668;28669;28670 21682;21683;21684;21685 21682 4 203050000 157130000 0 0 257730000 199760000 0 0 VNQSDISDAQIKK MKRALDNFKAVLDLRVNQSDISDAQIKKII LRVNQSDISDAQIKKIIAVIDRAAFDITQL R V N K K I 1 0 1 2 0 2 0 0 0 2 0 2 0 0 0 2 0 0 0 1 0 0 13 1 0 1 1444.7522 P64588 P64588 179 191 yqjI Transcriptional regulator YqjI yes yes 2;3 8.5889E-161 223.87 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 427390000 135180000 178970000 0 0 50675000 62571000 0 0 4787 398 5251 28671;28672;28673;28674;28675;28676;28677;28678 21686;21687;21688;21689;21690;21691;21692;21693;21694 21690 9 135180000 183200000 0 0 61129000 69315000 0 0 VNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGR LQNIGLETDSRGQLKVNSMYQTAQPHVYAV IGYPSLASAAYDQGRIAAQALVKGEATAHL K V N G R I 5 1 1 2 0 3 0 3 1 1 1 0 1 0 2 3 1 0 4 4 0 0 33 0 0 7 3527.678 P27306 P27306 295 327 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 7.6734E-36 90.485 By MS/MS By MS/MS 1 2 51284000 0 0 0 0 15374000 35910000 0 0 4788 323 5252;5253 28679;28680;28681 21695;21696;21697 21695 270 3 0 0 0 0 18546000 39781000 0 0 VNTRSTSQTFIYKCDA VRQVRYTASGCEVIAVNTRSTSQTFIYKCD NTRSTSQTFIYKCDAVLCTLPLGVLKQQPP A V N D A V 1 1 1 1 1 1 0 0 0 1 0 1 0 1 0 2 3 0 1 1 0 0 16 2 0 0 1889.8942 LSD1-FL-His LSD1-FL-His 607 622 yes yes 3 9.9859E-10 82.259 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 43271000 5905700 3435600 0 0 13434000 20497000 0 0 4789 24 5254 28682;28683;28684;28685 21698;21699;21700 21700 3 35650000 20562000 0 0 19125000 29218000 0 0 VPAPFAGVVKE EQSLITVEGDKASMEVPAPFAGVVKELKVN ASMEVPAPFAGVVKELKVNVGDKVKTGSLI E V P K E L 2 0 0 0 0 0 1 1 0 0 0 1 0 1 2 0 0 0 0 3 0 0 11 1 0 4 1112.623 P06959 P06959 250 260 aceF Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex yes yes 2 0.0062241 35.511 By MS/MS 1 0 0 0 0 0 0 0 0 0 4790 53 5255 28686 21701 21701 1 0 0 0 0 0 0 0 0 VPDYIHLPLALNPQGAK PTVRQISLYQLFGWKVPDYIHLPLALNPQG DYIHLPLALNPQGAKLSKQNHAPALPKGDP K V P A K L 2 0 1 1 0 1 0 1 1 1 3 1 0 0 3 0 0 0 1 1 0 0 17 0 0 5 1845.0149 P27305 P27305 222 238 gluQ Glutamyl-Q tRNA(Asp) synthetase yes yes 3 0.00025209 52.662 By MS/MS By MS/MS By MS/MS 1 1 1 14700000 14700000 0 0 0 0 0 0 0 4791 322 5256 28687;28688;28689 21702;21703;21704;21705 21705 4 14700000 0 0 0 0 0 0 0 VPGETQTGK GEIEVPTLDGRVKLKVPGETQTGKLFRMRG GRVKLKVPGETQTGKLFRMRGKGVKSVRGG K V P G K L 0 0 0 0 0 1 1 2 0 0 0 1 0 0 1 0 2 0 0 1 0 0 9 0 1 1 915.46616 P08622 P08622 293 301 dnaJ Chaperone protein DnaJ yes yes 2 0.0081639 52.255 By MS/MS By MS/MS 1 1 16946000 12143000 0 0 0 0 4803600 0 0 4792 61 5257 28690;28691 21706;21707;21708 21707 3 12143000 0 0 0 0 5321300 0 0 VPGTIGFATVR KDCAVYSREGHTGERVPGTIGFATVRAGDI TGERVPGTIGFATVRAGDIVGEHTAMFADI R V P V R A 1 1 0 0 0 0 0 2 0 1 0 0 0 1 1 0 2 0 0 2 0 0 11 0 0 2 1116.6291 P04036 P04036 202 212 dapB 4-hydroxy-tetrahydrodipicolinate reductase yes yes 2 0.0035928 56.013 By MS/MS 1 7346500 0 7346500 0 0 0 0 0 0 4793 43 5258 28692 21709 21709 1 0 7519900 0 0 0 0 0 0 VPGYGEKIP VDWFDARDPNPHVRPVPGYGEKIPVWLLGS NPHVRPVPGYGEKIPVWLLGSSLYSAQLAA P V P I P V 0 0 0 0 0 0 1 2 0 1 0 1 0 0 2 0 0 0 1 1 0 0 9 1 1 1 958.51238 P0ADV5 P0ADV5 158 166 yhbW Uncharacterized protein YhbW yes yes 2 0.012202 69.998 By MS/MS By MS/MS By MS/MS 1 1 1 11830000 6355700 4452000 0 0 1022600 0 0 0 4794 226 5259 28693;28694;28695 21710 21710 0 38367000 26645000 0 0 1455800 0 0 0 VPHPAYGNAR STEEMDSVFALPYKRVPHPAYGNARIPAYE LPYKRVPHPAYGNARIPAYEMIRFSVNIMR R V P A R I 2 1 1 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 1 1 0 0 10 0 0 4 1080.5465 Q46861 Q46861 360 369 ygiQ UPF0313 protein YgiQ yes yes 2;3 0.015185 46.426 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 14483000 126970 12678000 0 0 1347600 330220 0 0 4795 441 5260 28696;28697;28698;28699;28700 21711;21712 21711 1 766440 13872000 0 0 1625600 470730 0 0 VPKDVFMGVDELQVGMR ANDAYGQYDENLVQRVPKDVFMGVDELQVG KDVFMGVDELQVGMRFLAETDQGPVPVEIT R V P M R F 0 1 0 2 0 1 1 2 0 0 1 1 2 1 1 0 0 0 0 4 0 0 17 1 1 1 1918.9645 P0A9K9 P0A9K9 79 95 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 1.1326E-99 165.64 By MS/MS By MS/MS By MS/MS By MS/MS 5 5 5 5 1064500000 414580000 371450000 0 0 141120000 137310000 0 0 4796 169 5261;5262;5263 28701;28702;28703;28704;28705;28706;28707;28708;28709;28710;28711;28712;28713;28714;28715;28716;28717;28718;28719;28720 21713;21714;21715;21716;21717;21718;21719;21720;21721;21722;21723;21724;21725;21726;21727;21728;21729;21730;21731 21724 160;161 19 414580000 380220000 0 0 170230000 152100000 0 0 VPKEKDEMVEQEFNRLLEA KIKQKCPLYEANGQAVPKEKDEMVEQEFNR KDEMVEQEFNRLLEATSYLSHQLDFNVLNN A V P E A T 1 1 1 1 0 1 5 0 0 0 2 2 1 1 1 0 0 0 0 2 0 0 19 3 5 1 2303.1467 LSD1-FL-His LSD1-FL-His 372 390 yes yes 3;4 1.2393E-05 62.765 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 2 31331000 1061400 424070 0 0 16397000 13448000 0 0 4797 24 5264;5265 28721;28722;28723;28724;28725;28726;28727;28728 21732;21733;21734;21735 21735 42 4 6407000 2538100 0 0 23344000 19170000 0 0 VPLHTLR GGAEIARTEWYREGRVPLHTLRADIDYNTS TEWYREGRVPLHTLRADIDYNTSEAHTTYG R V P L R A 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 0 1 0 0 1 0 0 7 0 0 1 834.50757 P0A7V3 P0A7V3 173 179 rpsC 30S ribosomal protein S3 yes yes 2 3.2411E-07 122.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 126520000 22731000 36992000 0 0 26517000 40279000 0 0 4798 129 5266 28729;28730;28731;28732 21736;21737;21738;21739 21737 4 22731000 37866000 0 0 31987000 44620000 0 0 VPPVLLSGNHAE DCPHYTRPEVLEGMEVPPVLLSGNHAEIRR GMEVPPVLLSGNHAEIRRWRLKQSLGRTWL E V P A E I 1 0 1 0 0 0 1 1 1 0 2 0 0 0 2 1 0 0 0 2 0 0 12 0 0 3 1231.6561 P0A873 P0A873 192 203 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 1.5632E-10 103.7 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 151080000 21400000 19321000 31267000 28444000 6490600 4781300 15838000 23533000 4799 140 5267 28733;28734;28735;28736;28737;28738;28739;28740 21740;21741;21742;21743 21741 4 328800000 294650000 265670000 215650000 99929000 72468000 121900000 135050000 VPTPNVSVVDLTVR VLPELNGKLTGMAFRVPTPNVSVVDLTVRL RVPTPNVSVVDLTVRLEKAATYEQIKAAVK R V P V R L 0 1 1 1 0 0 0 0 0 0 1 0 0 0 2 1 2 0 0 5 0 0 14 0 0 2 1494.8406 P0A9B2 P0A9B2 233 246 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 1.7514E-09 107.09 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19089000 3505500 3453900 0 0 5448500 6681000 0 0 4800 163 5268 28741;28742;28743;28744 21744;21745;21746;21747;21748 21748 5 3505500 3535400 0 0 6572500 7401000 0 0 VPVAAAIEPVVSAPVVEE QREQEEVHVQPMVTEVPVAAAIEPVVSAPV AAAIEPVVSAPVVEEVAGVVEAPVQVAEPQ E V P E E V 4 0 0 0 0 0 3 0 0 1 0 0 0 0 3 1 0 0 0 6 0 0 18 0 2 7 1774.9717 P21513 P21513 874 891 rne Ribonuclease E yes yes 2 2.7024E-23 98.943 By MS/MS By MS/MS 1 1 10232000 4680100 5551700 0 0 0 0 0 0 4801 297 5269 28745;28746 21749;21750 21750 2 71908000 84664000 0 0 0 0 0 0 VPVEITA LQVGMRFLAETDQGPVPVEITAVEDDHVVV LAETDQGPVPVEITAVEDDHVVVDGNHMLA P V P T A V 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 2 0 0 7 0 1 1 727.41161 P0A9K9 P0A9K9 105 111 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 1 6.903E-08 132.01 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1556900000 182760000 154190000 0 0 409710000 810210000 0 0 4802 169 5270 28747;28748;28749;28750 21751;21752 21752 1 1103200000 922810000 0 0 583300000 1155000000 0 0 VPVEITAVEDDHVVVDGNHMLA LQVGMRFLAETDQGPVPVEITAVEDDHVVV VEDDHVVVDGNHMLAGQNLKFNVEVVAIRE P V P L A G 2 0 1 3 0 0 2 1 2 1 1 0 1 0 1 0 1 0 0 6 0 0 22 0 2 2 2358.1526 P0A9K9 P0A9K9 105 126 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2;3 3.9131E-79 148.91 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 3 3 1 369340000 12476000 3459900 0 0 160180000 192340000 0 882920 4803 169 5271;5272 28751;28752;28753;28754;28755;28756;28757;28758;28759;28760 21753;21754;21755;21756;21757 21755 159 5 75310000 20708000 0 0 228050000 274180000 0 5066900 VPVHAVLTATNPLIR PHSEAIRDAQRKKPKVPVHAVLTATNPLIR VPVHAVLTATNPLIRFIGSDDMTQNRELFQ K V P I R F 2 1 1 0 0 0 0 0 1 1 2 0 0 0 2 0 2 0 0 3 0 0 15 0 0 4 1599.9461 P37348 P37348 185 199 yecE UPF0759 protein YecE yes yes 3 0.0033739 37.013 By MS/MS By matching 1 1 10025000 6324400 0 0 0 3700200 0 0 0 4804 356 5273 28761;28762 21758 21758 1 6324400 0 0 0 4463600 0 0 0 VPVSIYLVNGIK QSLQDPFLNALRRERVPVSIYLVNGIKLQG RERVPVSIYLVNGIKLQGQIESFDQFVILL R V P I K L 0 0 1 0 0 0 0 1 0 2 1 1 0 0 1 1 0 0 1 3 0 0 12 0 0 1 1300.7755 P0A6X3 P0A6X3 20 31 hfq RNA-binding protein Hfq yes yes 2 3.3956E-16 94.692 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5684200 5684200 0 0 0 0 0 0 0 4805 84 5274 28763;28764;28765;28766 21759;21760;21761;21762;21763 21763 5 5684200 0 0 0 0 0 0 0 VPYEVGR ISSVGKTEQQLTAMKVPYEVGRAQFKHLAR EQQLTAMKVPYEVGRAQFKHLARAQIVGMN K V P G R A 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 2 0 0 7 0 1 1 818.42865 P27306 P27306 371 377 sthA Soluble pyridine nucleotide transhydrogenase yes yes 2 0.0024521 94.777 By MS/MS By MS/MS By MS/MS 1 1 1 127410000 47476000 51830000 0 0 28102000 0 0 0 4806 323 5275 28767;28768;28769 21764;21765;21766 21764 3 47476000 53053000 0 0 33899000 0 0 0 VPYGAVLAK LKLIDEFGRTKESYKVPYGAVLAKGDGEQV TKESYKVPYGAVLAKGDGEQVAGGETVANW K V P A K G 2 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 9 0 0 3 916.5382 P0A8T7 P0A8T7 997 1005 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 0.012601 58.194 By matching By matching By matching By MS/MS 1 1 1 1 22765000 4543200 5145500 0 0 4760800 8315200 0 0 4807 153 5276 28770;28771;28772;28773 21767 21767 0 4543200 5267000 0 0 5743000 9211400 0 0 VQAGLAPALITR ARPAIQHVLDLKGQKVQAGLAPALITRMRQ GQKVQAGLAPALITRMRQHLQADNQVILFL K V Q T R M 3 1 0 0 0 1 0 1 0 1 2 0 0 0 1 0 1 0 0 1 0 0 12 0 0 4 1208.7241 P17888 P17888 399 410 priA Primosomal protein N yes yes 2 0.00016159 63.283 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42158000 10959000 13521000 0 0 8251800 9426700 0 0 4808 290 5277 28774;28775;28776;28777 21768;21769;21770 21769 1 10959000 13840000 0 0 9954100 10443000 0 0 VQALADAAR KDVSFDRSGFQYHGRVQALADAAREAGLQF FQYHGRVQALADAAREAGLQF_________ R V Q A R E 4 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 0 4 913.49813 P0C018 P0C018 103 111 rplR 50S ribosomal protein L18 yes yes 2 1.2387E-13 131.03 By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 86704000 27459000 0 0 0 28035000 27711000 0 3498700 4809 266 5278 28778;28779;28780;28781;28782 21771;21772;21773 21771 3 27459000 0 0 0 33818000 31053000 0 20079000 VQALEEANNDLENK TMQELNSRLASYLDKVQALEEANNDLENKI KVQALEEANNDLENKIQDWYDKKGPAAIQK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 14 0 3 2 1585.7584 CON__P35527 CON__P35527 171 184 yes yes 2;3 8.3078E-146 214.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 980220000 191500000 147680000 0 0 250290000 390760000 0 0 + 4810 15 5279 28783;28784;28785;28786;28787 21774;21775;21776;21777;21778 21777 5 191500000 151160000 0 0 301930000 432870000 0 0 VQGEIPENADLK VINGNNNQQMRGVARVQGEIPENADLKTLV VARVQGEIPENADLKTLVGNGYVVITITPS R V Q L K T 1 0 1 1 0 1 2 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 12 0 2 2 1311.667 P0A6Y5 P0A6Y5 94 105 hslO 33 kDa chaperonin yes yes 2 0.0032761 56.359 By MS/MS By MS/MS By MS/MS 1 1 1 45809000 0 11729000 0 0 16965000 17115000 0 0 4811 85 5280 28788;28789;28790 21779;21780;21781 21780 3 0 12006000 0 0 20465000 18960000 0 0 VQGQELPESAHTASFAEIESAR VYSSPHLVRYTERVRVQGQELPESAHTASF ESAHTASFAEIESARGDISLTYFEYGTLSA R V Q A R G 4 1 0 0 0 2 4 1 1 1 1 0 0 1 1 3 1 0 0 1 0 0 22 0 4 5 2356.1295 P08192 P08192 95 116 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 3 2.0694E-47 135.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76432000 20455000 24389000 0 0 12633000 18955000 0 0 4812 59 5281 28791;28792;28793;28794 21782;21783;21784;21785;21786 21782 5 20455000 24965000 0 0 15239000 20998000 0 0 VQIFEMMDAK KATCLLDRKTVALKKVQIFEMMDAKARQDC VALKKVQIFEMMDAKARQDCVKEIGLLKQL K V Q A K A 1 0 0 1 0 1 1 0 0 1 0 1 2 1 0 0 0 0 0 1 0 0 10 0 1 1 1210.5726 GST-Nek6 GST-Nek6 307 316 yes yes 2 1.5284E-11 125.82 By MS/MS By MS/MS 3 3 795600000 0 0 0 0 345210000 450390000 0 0 4813 23 5282;5283;5284 28795;28796;28797;28798;28799;28800 21787;21788;21789;21790;21791;21792 21792 33;34 6 0 0 0 0 416420000 498940000 0 0 VQLLEGEVTPLKK RIPYSCRAGICGSCRVQLLEGEVTPLKKSA CRVQLLEGEVTPLKKSAMGDDGTILCCSCV R V Q K K S 0 0 0 0 0 1 2 1 0 0 3 2 0 0 1 0 1 0 0 2 0 0 13 1 2 1 1452.8552 P75863 P75863 333 345 ycbX Uncharacterized protein YcbX yes yes 3 0.016374 25.647 By MS/MS By MS/MS By matching 1 1 1 16050000 5326400 6188100 0 0 0 4535700 0 0 4814 411 5285 28801;28802;28803 21793 21793 1 5326400 6334200 0 0 0 5024500 0 0 VQLLGSGSILR KGIYKLETIEGSKGKVQLLGSGSILRHVRE SKGKVQLLGSGSILRHVREAAEILAKDYGV K V Q L R H 0 1 0 0 0 1 0 2 0 1 3 0 0 0 0 2 0 0 0 1 0 0 11 0 0 0 1141.6819 P0AFG8 P0AFG8 727 737 aceE Pyruvate dehydrogenase E1 component yes yes 2 0.0066326 39.305 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 12964000 4953900 0 0 0 3822100 4188200 0 0 4815 248 5286 28804;28805;28806;28807 21794;21795 21794 2 4953900 0 0 0 4610600 4639600 0 0 VQMLAQAAEEHPLHGGTGIAHTR VDAEGHMTRLRRLGKVQMLAQAAEEHPLHG EEHPLHGGTGIAHTRWATHGEPSEVNAHPH K V Q T R W 4 1 0 0 0 2 2 3 3 1 2 0 1 0 1 0 2 0 0 1 0 0 23 0 2 5 2423.2128 P17169 P17169 52 74 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 3;4;5 8.4914E-198 221.48 By MS/MS By MS/MS By MS/MS By MS/MS 7 8 9 7 29003000000 8348200000 7633300000 0 0 6741700000 6279800000 0 0 4816 288 5287;5288 28808;28809;28810;28811;28812;28813;28814;28815;28816;28817;28818;28819;28820;28821;28822;28823;28824;28825;28826;28827;28828;28829;28830;28831;28832;28833;28834;28835;28836;28837;28838 21796;21797;21798;21799;21800;21801;21802;21803;21804;21805;21806;21807;21808;21809;21810;21811;21812;21813;21814;21815;21816;21817;21818;21819;21820;21821 21818 250 26 8390900000 7830700000 0 0 8163400000 6956600000 0 0 VQQQLESSDLDQYR AELLGKRRLEKFAAKVQQQLESSDLDQYRA KVQQQLESSDLDQYRALLSKIQPTAEGEEL K V Q Y R A 0 1 0 2 0 4 1 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 14 0 1 0 1707.8064 P0A9P6 P0A9P6 391 404 deaD ATP-dependent RNA helicase DeaD yes yes 2 1.4468E-76 175.91 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 107620000 8383000 6039000 39029000 33983000 10664000 9521700 0 0 4817 173 5289 28839;28840;28841;28842;28843;28844 21822;21823;21824;21825 21825 4 8383000 6181600 331630000 257650000 12864000 10548000 0 0 VQRYVSP LTLGQYLQPSRHHLPVQRYVSPDEFDEMKA QPSRHHLPVQRYVSPDEFDEMKAEALAMGF P V Q S P D 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 2 0 0 7 1 0 0 847.4552 P60716 P60716 275 281 lipA Lipoyl synthase yes yes 2 0.018817 72.138 By matching By MS/MS 1 1 6403200 2103600 0 0 0 0 4299600 0 0 4818 382 5290 28845;28846 21826 21826 0 12698000 0 0 0 0 6129000 0 0 VQTGVGRTGE RELCNRHNALLIFDEVQTGVGRTGELYAYM LIFDEVQTGVGRTGELYAYMHYGVTPDLLT E V Q G E L 0 1 0 0 0 1 1 3 0 0 0 0 0 0 0 0 2 0 0 2 0 0 10 1 0 0 1002.5094 P77581 P77581 225 234 astC Succinylornithine transaminase yes yes 2 0.013136 48.283 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 49504000 1815700 2407100 7076200 8732100 1506400 0 12525000 15442000 4819 437 5291 28847;28848;28849;28850;28851;28852;28853 21827;21828;21829 21829 3 27898000 36709000 60126000 66203000 23193000 0 96397000 88617000 VQVALLTAQINHLQGHFAE VSEFGRDANDTGSTEVQVALLTAQINHLQG LLTAQINHLQGHFAEHKKDHHSRRGLLRMV E V Q A E H 3 0 1 0 0 3 1 1 2 1 3 0 0 1 0 0 1 0 0 2 0 0 19 0 0 3 2088.1116 P0ADZ4 P0ADZ4 27 45 rpsO 30S ribosomal protein S15 yes yes 2;3 1.114E-284 258.36 By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 481160000 7092900 6835700 0 0 221120000 245440000 0 673140 4820 231 5292 28854;28855;28856;28857;28858;28859;28860;28861;28862 21830;21831;21832;21833;21834;21835;21836 21833 7 108980000 104250000 0 0 3404400000 3720000000 0 3863000 VRARGGQLYVFADQDAGFVSSDNMHIIE PNNELLEKLKSNIEEVRARGGQLYVFADQD QDAGFVSSDNMHIIEMPHVEEVIAPIFYTV E V R I E M 3 2 1 3 0 2 1 3 1 2 1 0 1 2 0 2 0 0 1 3 0 0 28 2 0 3 3094.4931 P17169 P17169 537 564 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4 8.2331E-10 73.805 By MS/MS By MS/MS 1 2 58265000 0 0 0 0 14271000 43993000 0 0 4821 288 5293;5294 28863;28864;28865 21837;21838;21839 21839 241 3 0 0 0 0 219720000 666790000 0 0 VRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEE PNNELLEKLKSNIEEVRARGGQLYVFADQD SSDNMHIIEMPHVEEVIAPIFYTVPLQLLA E V R E E V 3 2 1 3 0 2 3 3 2 2 1 0 2 2 1 2 0 0 1 4 0 0 34 2 2 4 3816.7988 P17169 P17169 537 570 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4;5 2.1384E-174 191.12 By MS/MS By MS/MS 6 6 599070000 0 0 0 0 251660000 347410000 0 0 4822 288 5295;5296;5297 28866;28867;28868;28869;28870;28871;28872;28873;28874;28875;28876;28877 21840;21841;21842;21843;21844;21845;21846;21847;21848;21849;21850;21851;21852 21848 241;242 13 0 0 0 0 3874600000 5265500000 0 0 VRENEPFDVALR ______________________________ VIKVRENEPFDVALRRFKRSCEKAGVLAEV K V R L R R 1 2 1 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 12 1 2 2 1443.747 P68679 P68679 6 17 rpsU 30S ribosomal protein S21 yes yes 2;3 2.7331E-19 127.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 3 1 2 3 1 144940000 25819000 30421000 9076000 0 25998000 50882000 0 2744500 4823 402 5298 28878;28879;28880;28881;28882;28883;28884;28885;28886;28887;28888;28889 21853;21854;21855;21856;21857;21858 21854 6 25819000 47102000 77117000 0 31361000 174710000 0 15750000 VRENEPFDVALRR ______________________________ IKVRENEPFDVALRRFKRSCEKAGVLAEVR K V R R R F 1 3 1 1 0 0 2 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 13 2 2 2 1599.8481 P68679 P68679 6 18 rpsU 30S ribosomal protein S21 yes yes 3;4 6.1793E-08 96.059 By MS/MS By MS/MS By MS/MS By matching 2 2 2 1 71657000 26477000 28403000 0 0 10196000 6581300 0 0 4824 402 5299 28890;28891;28892;28893;28894;28895;28896 21859;21860;21861;21862 21859 4 26477000 29074000 0 0 12299000 7290600 0 0 VRHGLQSILR VQQALSMSLVGDKAKVRHGLQSILRETDAD GDKAKVRHGLQSILRETDADEIMVNGQIFD K V R L R E 0 2 0 0 0 1 0 1 1 1 2 0 0 0 0 1 0 0 0 1 0 0 10 1 0 0 1177.7044 P0ADV5 P0ADV5 291 300 yhbW Uncharacterized protein YhbW yes yes 3 7.6537E-05 93.667 By MS/MS By MS/MS By matching By matching 1 1 1 1 28630000 12344000 13100000 0 0 1387300 1797600 0 0 4825 226 5300 28897;28898;28899;28900 21863;21864 21864 2 12344000 13410000 0 0 1673500 1991400 0 0 VRPGVQVK GLKAGDRVVISGLQKVRPGVQVKAQEVTAD VISGLQKVRPGVQVKAQEVTADNNQQAASG K V R V K A 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 3 0 0 8 1 0 1 881.54469 P0AE06 P0AE06 367 374 acrA Multidrug efflux pump subunit AcrA yes yes 2 0.0075309 73.039 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14455000 3816800 4522500 0 0 2873800 3241900 0 0 4826 232 5301 28901;28902;28903;28904 21865;21866;21867;21868;21869 21868 5 3816800 4629300 0 0 3466600 3591300 0 0 VRTKRAIIE GIDSDGSLLEFDYHEVRTKRAIIENSRHVM EFDYHEVRTKRAIIENSRHVMLVVDHSKFG E V R I E N 1 2 0 0 0 0 1 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 9 3 0 1 1084.6717 P0ACL0 P0ACL0 189 197 glpR Glycerol-3-phosphate regulon repressor yes yes 3 0.01796 36.424 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 206630000 16063000 18800000 24408000 35361000 9688600 10154000 37784000 54368000 4827 215 5302 28905;28906;28907;28908;28909;28910;28911;28912 21870;21871;21872 21872 3 246800000 286700000 207390000 268090000 149160000 153900000 290800000 312010000 VRVASPAIVE KFSAASQPAAPVTKEVRVASPAIVEAKPVK PVTKEVRVASPAIVEAKPVKTIKDKVRAMR E V R V E A 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 3 0 0 10 1 0 3 1039.6026 P0AFY8 P0AFY8 49 58 seqA Negative modulator of initiation of replication yes yes 2 0.011278 50.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 231270000 13980000 17637000 35724000 36967000 10094000 10482000 44267000 62119000 4828 252 5303 28913;28914;28915;28916;28917;28918;28919;28920 21873;21874 21874 2 214790000 268970000 303540000 280270000 155400000 158870000 340690000 356490000 VSAALDK PLIIAGASGDDIRRRVSAALDKVGLLDKAK SGDDIRRRVSAALDKVGLLDKAKNFPIQLS R V S D K V 2 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 7 0 0 2 702.3912 P0A9R7 P0A9R7 118 124 ftsE Cell division ATP-binding protein FtsE yes yes 2 0.013762 58.917 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 45295000 15172000 12956000 0 0 8810900 8356800 0 0 4829 174 5304 28921;28922;28923;28924 21875;21876;21877;21878 21877 3 15172000 13262000 0 0 10629000 9257500 0 0 VSDAASNDTESLAGAEQAAGVK KHEKALDAYYALQQKVSDAASNDTESLAGA DTESLAGAEQAAGVKATQTGWFSKDNLPEE K V S V K A 6 0 1 2 0 1 2 2 0 0 1 1 0 0 0 3 1 0 0 2 0 0 22 0 2 6 2089.9764 P0ADY1 P0ADY1 391 412 ppiD Peptidyl-prolyl cis-trans isomerase D yes yes 2 5.8063E-11 80.534 By matching By MS/MS By matching By MS/MS 1 1 1 1 19124000 3863600 5764200 0 0 4406000 5089900 0 0 4830 227 5305 28925;28926;28927;28928 21879 21879 1 3863600 5900300 0 0 5314900 5638500 0 0 VSDTQAYRQFGNSVVVP LMGFEAPGEAKFRIPVSDTQAYRQFGNSVV DTQAYRQFGNSVVVPVFAAVAKLLEPKIKQ P V S V P V 1 1 1 1 0 2 0 1 0 0 0 0 0 1 1 2 1 0 1 4 0 0 17 1 0 1 1865.9272 P0AED9 P0AED9 425 441 dcm DNA-cytosine methyltransferase yes yes 2 0.0011351 67.456 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28087000 1043900 1084600 0 0 17389000 8569300 0 0 4831 235 5306 28929;28930;28931;28932 21880 21880 1 6301800 6491300 0 0 24757000 12216000 0 0 VSEGQTVR ______________________________ SGGKQHRVSEGQTVRLEKLDIATGETVEFA R V S V R L 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 2 0 0 8 0 1 0 874.45084 P0AG48 P0AG48 14 21 rplU 50S ribosomal protein L21 yes yes 2 4.9624E-05 111.01 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 76688000 22188000 31509000 0 0 12749000 10242000 0 0 4832 258 5307 28933;28934;28935;28936 21881;21882;21883;21884;21885 21881 4 22188000 32252000 0 0 15380000 11345000 0 0 VSEISIVGR QIMMITDAGTLVRTRVSEISIVGRNTQGVI TLVRTRVSEISIVGRNTQGVILIRTAEDEN R V S G R N 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 2 0 0 0 2 0 0 9 0 1 0 958.54475 P0AES4 P0AES4 809 817 gyrA DNA gyrase subunit A yes yes 2 0.00018317 101.54 By MS/MS By MS/MS 1 1 10291000 0 0 0 0 5065700 5225700 0 0 4833 238 5308 28937;28938 21886 21886 1 0 0 0 0 6110700 5788900 0 0 VSELGQGAHVER EQIEKQLHKLVDVLRVSELGQGAHVEREIM VLRVSELGQGAHVEREIMLVKIQASGYGRD R V S E R E 1 1 0 0 0 1 2 2 1 0 1 0 0 0 0 1 0 0 0 2 0 0 12 0 2 1 1280.6473 P00894 P00894 73 84 ilvH Acetolactate synthase isozyme 3 small subunit yes yes 2;3 6.4629E-70 166.97 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 132020000 32864000 43388000 0 0 25039000 30727000 0 0 4834 30 5309 28939;28940;28941;28942;28943;28944;28945;28946 21887;21888;21889;21890;21891;21892;21893;21894 21890 7 32864000 44412000 0 0 30204000 34039000 0 0 VSELQIPVNAGSVDMLDQLGQVSPGHR IVFTADVIDQATLERVSELQIPVNAGSVDM VDMLDQLGQVSPGHRVWLRVNPGFGHGHSQ R V S H R V 1 1 1 2 0 3 1 3 1 1 3 0 1 0 2 3 0 0 0 4 0 0 27 0 1 3 2845.4392 P00861 P00861 112 138 lysA Diaminopimelate decarboxylase yes yes 3 1.1137E-44 117.08 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 253130000 65536000 89475000 0 0 43272000 54849000 0 0 4835 28 5310;5311 28947;28948;28949;28950;28951;28952 21895;21896;21897;21898;21899;21900 21899 61 6 65536000 91587000 0 0 52199000 60760000 0 0 VSELVGLTMSDISLR RDKAMLEVLYATGLRVSELVGLTMSDISLR VSELVGLTMSDISLRQGVVRVIGKGNKERL R V S L R Q 0 1 0 1 0 0 1 1 0 1 3 0 1 0 0 3 1 0 0 2 0 0 15 0 1 0 1618.86 P0A8P8 P0A8P8 149 163 xerD Tyrosine recombinase XerD yes yes 2 1.8756E-08 80.69 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 166950000 37501000 35311000 0 0 41396000 52742000 0 0 4836 151 5312;5313 28953;28954;28955;28956;28957;28958;28959;28960 21901;21902;21903;21904 21902 150 2 37501000 36144000 0 0 49937000 58426000 0 0 VSERWPGRLTVDELHPP TLNELNGLLNDALAPVSERWPGRLTVDELH ERWPGRLTVDELHPPIPGYECPPNHQLVEV P V S P P I 0 2 0 1 0 0 2 1 1 0 2 0 0 0 3 1 1 1 0 2 0 0 17 2 2 2 1987.0276 P23908 P23908 285 301 argE Acetylornithine deacetylase yes yes 3 0.020081 30.543 By MS/MS By MS/MS 1 1 4631700 0 0 0 0 2480300 2151400 0 0 4837 308 5314 28961;28962 21905 21905 0 0 0 0 0 3531200 3066800 0 0 VSFDKDKR SNPDLYEGDGELRVRVSFDKDKRTLTISDN DGELRVRVSFDKDKRTLTISDNGVGMTRDE R V S K R T 0 1 0 2 0 0 0 0 0 0 0 2 0 1 0 1 0 0 0 1 0 0 8 2 0 0 993.52434 P0A6Z3 P0A6Z3 67 74 htpG Chaperone protein HtpG yes yes 2 0.01715 69.423 By MS/MS By MS/MS 1 1 11295000 6657900 4637100 0 0 0 0 0 0 4838 88 5315 28963;28964 21906 21906 1 6657900 4746500 0 0 0 0 0 0 VSFQVHSE VRLPNGVLRTTGEHEVSFQVHSEVFAKVIV RTTGEHEVSFQVHSEVFAKVIVNVVAE___ E V S S E V 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 2 0 0 0 2 0 0 8 0 0 0 931.43995 P0A7R1 P0A7R1 130 137 rplI 50S ribosomal protein L9 yes yes 2 0.00077384 104.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 106650000 4825400 4543700 24536000 0 2088100 3483400 31721000 35454000 4839 119 5316 28965;28966;28967;28968;28969;28970;28971 21907;21908;21909;21910 21907 4 74140000 69293000 208480000 0 32148000 52796000 244130000 203460000 VSGDRHEYLIPFNQLLAIHCK QHPYDRAVILNAGIKVSGDRHEYLIPFNQL EYLIPFNQLLAIHCKRGLVWGELEFVLPDE K V S C K R 1 1 1 1 1 1 1 1 2 2 3 1 0 1 1 1 0 0 1 1 0 0 21 1 1 2 2509.29 P15038 P15038 29 49 helD Helicase IV yes yes 4 3.1131E-07 61.648 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24029000 6136200 5563300 0 0 4667900 7661700 0 0 4840 281 5317 28972;28973;28974;28975 21911;21912;21913;21914 21914 4 6136200 5694600 0 0 5630900 8487500 0 0 VSGGLHGVGVSVVNALSQK TVLHAGGKFDDNSYKVSGGLHGVGVSVVNA LHGVGVSVVNALSQKLELVIQREGKIHRQI K V S Q K L 1 0 1 0 0 1 0 4 1 0 2 1 0 0 0 3 0 0 0 5 0 0 19 0 0 1 1806.9952 P0AES6 P0AES6 111 129 gyrB DNA gyrase subunit B yes yes 3 3.7984E-77 170.89 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 170600000 45412000 41758000 0 0 36556000 46879000 0 0 4841 239 5318 28976;28977;28978;28979 21915;21916;21917;21918 21918 4 45412000 42744000 0 0 44098000 51931000 0 0 VSISGLPR TALSLAETIRVSVAKVSISGLPRFTVSIGV IRVSVAKVSISGLPRFTVSIGVAHHEGNES K V S P R F 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 8 0 0 1 827.4865 P77302 P77302 362 369 ydaM Probable diguanylate cyclase YdaM yes yes 2 0.0036171 67.981 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 2 1 67944000 21256000 19084000 0 1693100 1765900 22030000 2114900 0 4842 429 5319 28980;28981;28982;28983;28984;28985;28986 21919;21920;21921 21920 3 21256000 19535000 0 12836000 27187000 41764000 16276000 0 VSLAVVK EYPGALQVVNFAEGKVSLAVVKAYYGGPLI VVNFAEGKVSLAVVKAYYGGPLIGNALSTM K V S V K A 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 7 0 0 1 714.46398 P0AGI8 P0AGI8 153 159 trkA Trk system potassium uptake protein TrkA yes yes 2 0.0045261 64.803 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 17169000 5126100 5713700 0 0 2693000 3636500 0 0 4843 264 5320 28987;28988;28989;28990 21922;21923;21924;21925 21923 4 5126100 5848500 0 0 3248600 4028400 0 0 VSLITSDGIK ELANGTLKQENGKAKVSLITSDGIKFPQDG NGKAKVSLITSDGIKFPQDGTLEFSDVTVD K V S I K F 0 0 0 1 0 0 0 1 0 2 1 1 0 0 0 2 1 0 0 1 0 0 10 0 0 0 1031.5863 P0AE06 P0AE06 244 253 acrA Multidrug efflux pump subunit AcrA yes yes 2 0.00060269 54.982 By MS/MS 1 0 0 0 0 0 0 0 0 0 4844 232 5321 28991 21926 21926 1 0 0 0 0 0 0 0 0 VSLVAAR LENLHSKTIDLGLERVSLVAARLGVLKPAP TIDLGLERVSLVAARLGVLKPAPFVFTVAG R V S A R L 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 0 2 714.43882 P08192 P08192 35 41 folC Bifunctional protein FolC;Folylpolyglutamate synthase;Dihydrofolate synthase yes yes 2 0.0026977 84.359 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 26662000 6338400 8639500 0 0 6577500 5106800 0 0 4845 59 5322 28992;28993;28994;28995 21927;21928;21929;21930 21927 4 6338400 8843400 0 0 7934500 5657200 0 0 VSNNLLELR TMLQQEIDEYYAHFRVSNNLLELRNLVQVA YYAHFRVSNNLLELRNLVQVAELIVRCAMM R V S L R N 0 1 2 0 0 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 0 0 9 0 1 0 1056.5928 P10902 P10902 483 491 nadB L-aspartate oxidase yes yes 2 5.8179E-14 133.32 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 221750000 50360000 73829000 0 0 49836000 47727000 0 0 4846 274 5323 28996;28997;28998;28999 21931;21932;21933;21934 21933 4 50360000 75572000 0 0 60117000 52871000 0 0 VSQALDILTYTNK AQKVRLVADLIRGKKVSQALDILTYTNKKA KKVSQALDILTYTNKKAAVLVKKVLESAIA K V S N K K 1 0 1 1 0 1 0 0 0 1 2 1 0 0 0 1 2 0 1 1 0 0 13 0 0 1 1464.7824 P61175 P61175 29 41 rplV 50S ribosomal protein L22 yes yes 2 2.0732E-57 196.24 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 114340000 24143000 17814000 0 0 36488000 35894000 0 0 4847 385 5324 29000;29001;29002;29003 21935;21936;21937;21938 21935 4 24143000 18235000 0 0 44016000 39762000 0 0 VSQALDILTYTNKK AQKVRLVADLIRGKKVSQALDILTYTNKKA KVSQALDILTYTNKKAAVLVKKVLESAIAN K V S K K A 1 0 1 1 0 1 0 0 0 1 2 2 0 0 0 1 2 0 1 1 0 0 14 1 0 1 1592.8774 P61175 P61175 29 42 rplV 50S ribosomal protein L22 yes yes 2;3 2.1573E-63 157.86 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 155950000 47419000 34337000 0 0 37542000 36647000 0 0 4848 385 5325 29004;29005;29006;29007;29008;29009;29010;29011 21939;21940;21941;21942;21943;21944;21945;21946 21939 8 47419000 35148000 0 0 45288000 40597000 0 0 VSSSGQEVQSSAKE IENQYETQITQIEHEVSSSGQEVQSSAKEV EVSSSGQEVQSSAKEVTQLRHGVQELEIEL E V S K E V 1 0 0 0 0 2 2 1 0 0 0 1 0 0 0 5 0 0 0 2 0 0 14 1 1 1 1421.6634 CON__P35527 CON__P35527 356 369 yes yes 2 7.9749E-17 109.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 48903000 0 0 3125800 2853000 2998800 5586700 15918000 18421000 + 4849 15 5326 29012;29013;29014;29015;29016;29017 21947;21948;21949;21950;21951;21952 21951 6 0 0 26559000 21630000 46169000 84674000 122510000 105720000 VSVHREE VKGNQVRIGVNAPKEVSVHREEIYQRIQAE IGVNAPKEVSVHREEIYQRIQAEKSQQSSY E V S E E I 0 1 0 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 2 0 0 7 1 1 0 854.42463 P69913 P69913 40 46 csrA Carbon storage regulator yes yes 3 0.023615 27.137 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 28607000 0 0 3549400 4899700 0 0 8574100 11584000 4850 405 5327 29018;29019;29020;29021 21953 21953 0 0 0 30159000 37147000 0 0 65988000 66476000 VSWHEAR MHELAEKNYDVIKKKVSWHEARETFANRGE NYDVIKKKVSWHEARETFANRGESYKVSIL K V S A R E 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 7 0 1 1 883.43005 P0A8M3 P0A8M3 139 145 thrS Threonine--tRNA ligase yes yes 2 0.0058882 50.127 By MS/MS By MS/MS By matching By matching 1 1 1 1 6593700 0 0 0 0 0 3777100 1050000 1766600 4851 147 5328 29022;29023;29024;29025 21954;21955 21954 2 0 0 0 0 0 4184200 8081300 10138000 VTADNNQQAASGAQPE GLQKVRPGVQVKAQEVTADNNQQAASGAQP TADNNQQAASGAQPEQSKS___________ E V T P E Q 4 0 2 1 0 3 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 0 16 0 0 5 1599.7125 P0AE06 P0AE06 378 393 acrA Multidrug efflux pump subunit AcrA yes yes 2 8.9304E-27 119.03 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 48024000 3591700 0 9782700 7930300 3981100 3681700 7708100 11349000 4852 232 5329 29026;29027;29028;29029;29030;29031;29032 21956;21957;21958;21959 21958 4 55185000 0 83122000 60124000 61293000 55802000 59324000 65128000 VTAEDVLKPGTADILVPR GGDVKEPLRDRVLGRVTAEDVLKPGTADIL EDVLKPGTADILVPRNTLLHEQWCDLLEEN R V T P R N 2 1 0 2 0 0 1 1 0 1 2 1 0 0 2 0 2 0 0 3 0 0 18 1 1 4 1893.0571 P0A8T7 P0A8T7 843 860 rpoC DNA-directed RNA polymerase subunit beta yes yes 3 5.9233E-31 117.18 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 117100000 36257000 21317000 0 0 31594000 27930000 0 0 4853 153 5330 29033;29034;29035;29036 21960;21961;21962 21962 3 36257000 21820000 0 0 38112000 30940000 0 0 VTAERDPANLK EVKDGHLIVNGKKIRVTAERDPANLKWDEV KKIRVTAERDPANLKWDEVGVDVVAEATGL R V T L K W 2 1 1 1 0 0 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 11 1 1 3 1212.6463 P0A9B2 P0A9B2 74 84 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 0.0096105 55.549 By matching By matching By MS/MS By MS/MS 1 1 1 1 11427000 2909000 2092200 0 0 3198700 3227300 0 0 4854 163 5331 29037;29038;29039;29040 21963 21963 1 2909000 2141500 0 0 3858600 3575200 0 0 VTALFVDGK ASEFKGYDHLELNGKVTALFVDGKAVDAIN LELNGKVTALFVDGKAVDAINAGQEAVVVL K V T G K A 1 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 9 0 0 1 948.52803 P00957 P00957 470 478 alaS Alanine--tRNA ligase yes yes 2 0.0057085 55.549 By MS/MS By MS/MS By MS/MS 1 1 1 17350000 7295500 4114400 0 0 5940100 0 0 0 4855 33 5332 29041;29042;29043 21964;21965;21966 21964 3 7295500 4211500 0 0 7165500 0 0 0 VTDAEIAEVLAR ATQLEGKTMRLLRNKVTDAEIAEVLARWTG RNKVTDAEIAEVLARWTGIPVSRMMESERE K V T A R W 3 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 2 0 0 12 0 2 3 1285.6878 P63284-2;P63284 P63284-2 383 394 clpB Chaperone protein ClpB yes no 2 2.2775E-05 58.676 By MS/MS By MS/MS 1 1 2706500 0 2706500 0 0 0 0 0 0 4856 393 5333 29044;29045 21967;21968 21967 2 0 2770400 0 0 0 0 0 0 VTDYLQMGQEVPVK GLVHISQIADKRVEKVTDYLQMGQEVPVKV KVTDYLQMGQEVPVKVLEVDRQGRIRLSIK K V T V K V 0 0 0 1 0 2 1 1 0 0 1 1 1 0 1 0 1 0 1 3 0 0 14 0 1 1 1605.8072 P05055 P05055 662 675 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 1.3719E-13 111.86 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52117000 9402800 9400800 0 0 18953000 14361000 0 0 4857 48 5334 29046;29047;29048;29049 21969;21970;21971;21972 21971 4 9402800 9622700 0 0 22863000 15909000 0 0 VTEFGAMVIK AISISGPISRITDDRVTEFGAMVIKAAKEV ITDDRVTEFGAMVIKAAKEVTLAYGGMR__ R V T I K A 1 0 0 0 0 0 1 1 0 1 0 1 1 1 0 0 1 0 0 2 0 0 10 0 1 1 1093.5842 P16528 P16528 252 261 iclR Acetate operon repressor yes yes 2 2.3143E-10 138.54 By matching By matching By MS/MS By MS/MS 1 1 1 1 162520000 39377000 32758000 0 0 47632000 42755000 0 0 4858 285 5335 29050;29051;29052;29053 21973;21974 21974 2 39377000 33531000 0 0 57459000 47362000 0 0 VTFKEDNSLPVR EIKELLAEIAELSDKVTFKEDNSLPVRKPS SDKVTFKEDNSLPVRKPSFLITNPGSNQGP K V T V R K 0 1 1 1 0 0 1 0 0 0 1 1 0 1 1 1 1 0 0 2 0 0 12 1 1 1 1403.7409 P35340 P35340 50 61 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2;3 2.3069E-100 231.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 654830000 157440000 132280000 0 0 168420000 196680000 0 0 4859 348 5336 29054;29055;29056;29057;29058;29059;29060;29061 21975;21976;21977;21978;21979;21980;21981;21982 21982 8 157440000 135410000 0 0 203170000 217880000 0 0 VTFLGFDAATEAR SWSNLQDQQSIDERRVTFLGFDAATEARYL RRVTFLGFDAATEARYLGYVRFMVNVEGRY R V T A R Y 3 1 0 1 0 0 1 1 0 0 1 0 0 2 0 0 2 0 0 1 0 0 13 0 1 3 1396.6987 P0A8W8 P0A8W8 90 102 yfbU UPF0304 protein YfbU yes yes 2 0.0024339 58.676 By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 13004000 3168400 2370100 0 0 2945300 4520600 0 0 4860 155 5337 29062;29063;29064;29065;29066 21983;21984;21985 21985 3 18453000 2426000 0 0 3552900 5007900 0 0 VTFLPTHTDRKSFLE RRQPAKLRHFTVETEVTFLPTHTDRKSFLE VTFLPTHTDRKSFLELIALDQPGLLARVGK E V T L E L 0 1 0 1 0 0 1 0 1 0 2 1 0 2 1 1 3 0 0 1 0 0 15 2 0 1 1789.9363 P27249 P27249 804 818 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 3 0.004356 39.005 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 1 31308000 1937500 2030400 7636100 7178800 2166900 2273800 0 8084600 4861 320 5338 29067;29068;29069;29070;29071;29072;29073 21986;21987 21987 1 29768000 30964000 64883000 54427000 33362000 34463000 0 46396000 VTGATDLSNK YDIDLFRTLIQAVAKVTGATDLSNKSLRVI QAVAKVTGATDLSNKSLRVIADHIRSCAFL K V T N K S 1 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 10 0 0 1 1004.5138 P00957 P00957 270 279 alaS Alanine--tRNA ligase yes yes 2 0.0030668 61.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 18403000 7055900 6247400 0 0 2577000 2523200 0 0 4862 33 5339 29074;29075;29076;29077 21988;21989;21990;21991 21989 4 7055900 6394900 0 0 3108700 2795100 0 0 VTGFIRFE PSKTVGQLLKEHNAEVTGFIRFEVGEGIEK LKEHNAEVTGFIRFEVGEGIEKVETDFAAE E V T F E V 0 1 0 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 0 1 0 0 8 1 0 0 967.51272 P0A6P1 P0A6P1 253 260 tsf Elongation factor Ts yes yes 2 0.014545 61.962 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 25382000 1021000 1357100 2887900 2904600 1427600 1465900 5547400 8770200 4863 77 5340 29078;29079;29080;29081;29082;29083;29084;29085 21992 21992 1 15687000 20696000 24538000 22021000 21979000 22218000 42694000 50331000 VTGGDILVGKVTPKGE LSKLDESGIVYIGAEVTGGDILVGKVTPKG TGGDILVGKVTPKGETQLTPEEKLLRAIFG E V T G E T 0 0 0 1 0 0 1 4 0 1 1 2 0 0 1 0 2 0 0 3 0 0 16 2 0 1 1568.8774 P0A8V2 P0A8V2 877 892 rpoB DNA-directed RNA polymerase subunit beta yes yes 3 0.00038607 52.254 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 78145000 3993900 1604600 15485000 15048000 0 0 21436000 20578000 4864 154 5341 29086;29087;29088;29089;29090;29091 21993;21994 21994 2 61365000 24471000 131580000 114090000 0 0 164970000 118090000 VTGQALTVNEK VIPTCHYMMGGIPTKVTGQALTVNEKGEDV IPTKVTGQALTVNEKGEDVVVPGLFAVGEI K V T E K G 1 0 1 0 0 1 1 1 0 0 1 1 0 0 0 0 2 0 0 2 0 0 11 0 1 1 1158.6245 P0AC41 P0AC41 364 374 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 2.3921E-257 256.24 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 2 179990000 51184000 41466000 0 5167000 38363000 43816000 0 0 4865 203 5342 29092;29093;29094;29095;29096;29097;29098;29099 21995;21996;21997;21998 21996 4 64497000 52897000 0 39174000 46277000 49901000 0 0 VTGVKIHAEVPLSE DLSRRRGMLKGQESEVTGVKIHAEVPLSEM EVTGVKIHAEVPLSEMFGYATQLRSLTKGR E V T S E M 1 0 0 0 0 0 2 1 1 1 1 1 0 0 1 1 1 0 0 3 0 0 14 1 1 2 1477.814 P0A6M8 P0A6M8 649 662 fusA Elongation factor G yes yes 3 0.0014143 40.066 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 14180000 2404600 2370100 0 0 2543200 1997800 2026200 2838500 4866 76 5343 29100;29101;29102;29103;29104;29105 21999 21999 1 36946000 36145000 0 0 39155000 30279000 15594000 16290000 VTHIISDE KFNRSGEARIGHLDEVTHIISDERQVATSL RIGHLDEVTHIISDERQVATSLVTA_____ E V T D E R 0 0 0 1 0 0 1 0 1 2 0 0 0 0 0 1 1 0 0 1 0 0 8 0 0 0 912.45526 P0ACK8 P0ACK8 226 233 fucR L-fucose operon activator yes yes 2 2.0947E-11 129.96 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 50231000 0 0 0 8289800 3688100 0 16108000 22145000 4867 214 5344 29106;29107;29108;29109;29110;29111 22000;22001;22002;22003 22003 4 0 0 0 62850000 56782000 0 123970000 127090000 VTIHGWAYGIHDGLLR GHSTIMQSAWKRGQKVTIHGWAYGIHDGLL TIHGWAYGIHDGLLRDLDVTATNRETLEQR K V T L R D 1 1 0 1 0 0 0 3 2 2 2 0 0 0 0 0 1 1 1 1 0 0 16 0 0 1 1806.9529 P61517 P61517 174 189 can Carbonic anhydrase 2 yes yes 2;3;4 9.2185E-24 122.16 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 991730000 196460000 142090000 0 0 294630000 358550000 0 0 4868 386 5345 29112;29113;29114;29115;29116;29117;29118;29119;29120;29121;29122;29123 22004;22005;22006;22007;22008;22009;22010;22011;22012 22005 9 196460000 145440000 0 0 355420000 397190000 0 0 VTIHTAR SVSRIVIERPAKSIRVTIHTARPGIVIGKK ERPAKSIRVTIHTARPGIVIGKKGEDVEKL R V T A R P 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 2 0 0 1 0 0 7 0 0 1 796.45554 P0A7V3 P0A7V3 66 72 rpsC 30S ribosomal protein S3 yes yes 2 0.021567 46.016 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27275000 9535000 9576700 0 0 3732800 4430800 0 0 4869 129 5346 29124;29125;29126;29127 22013 22013 1 9535000 9802700 0 0 4502800 4908400 0 0 VTIHTARPGIVIGK SVSRIVIERPAKSIRVTIHTARPGIVIGKK RVTIHTARPGIVIGKKGEDVEKLRKVVADI R V T G K K 1 1 0 0 0 0 0 2 1 3 0 1 0 0 1 0 2 0 0 2 0 0 14 1 0 2 1460.8827 P0A7V3 P0A7V3 66 79 rpsC 30S ribosomal protein S3 yes yes 3;4 1.761E-09 83.087 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 302530000 88898000 78031000 0 0 34268000 101330000 0 0 4870 129 5347 29128;29129;29130;29131;29132;29133;29134 22014;22015;22016;22017;22018;22019;22020;22021;22022;22023;22024 22023 11 88898000 79873000 0 0 41337000 112250000 0 0 VTINQSLLQPLNVE GGGYGPVCPPGGIQEVTINQSLLQPLNVEI EVTINQSLLQPLNVEIDPEIQKVKSREREQ E V T V E I 0 0 2 0 0 2 1 0 0 1 3 0 0 0 1 1 1 0 0 2 0 0 14 0 0 1 1566.8617 CON__P04264 CON__P04264 155 168 no no 2 0.0036881 55.401 By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 1 32780000 1980500 3215500 0 0 16186000 9804200 0 1593400 + 4871 9 5348 29135;29136;29137;29138;29139;29140;29141;29142 22025 22025 1 30430000 39148000 0 0 225820000 134630000 0 9144100 VTKPEAGHFAK YRAIQVTTGAKKANRVTKPEAGHFAKAGVE KANRVTKPEAGHFAKAGVEAGRGLWEFRLA R V T A K A 2 0 0 0 0 0 1 1 1 0 0 2 0 1 1 0 1 0 0 1 0 0 11 1 1 3 1183.635 P60438 P60438 60 70 rplC 50S ribosomal protein L3 yes yes 2;3 1.0908E-09 96.113 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 207810000 61181000 90028000 0 0 3714500 52889000 0 0 4872 380 5349 29143;29144;29145;29146;29147;29148;29149;29150 22026;22027;22028;22029;22030;22031;22032 22032 4 61181000 92153000 0 0 4480900 58589000 0 0 VTLAQLLDPMVEAK DFTLRDISECFPAQRVTLAQLLDPMVEAKY RVTLAQLLDPMVEAKYILTPVLWKYLYRYA R V T A K Y 2 0 0 1 0 1 1 0 0 0 3 1 1 0 1 0 1 0 0 2 0 0 14 0 1 3 1526.8378 P0AED9 P0AED9 308 321 dcm DNA-cytosine methyltransferase yes yes 2 1.238E-62 165.66 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 552050000 171470000 131310000 0 0 113560000 135710000 0 0 4873 235 5350;5351 29151;29152;29153;29154;29155;29156;29157;29158 22033;22034;22035;22036;22037;22038 22034 211 6 171470000 134410000 0 0 136990000 150330000 0 0 VTLAYGGMR RVTEFGAMVIKAAKEVTLAYGGMR______ IKAAKEVTLAYGGMR_______________ E V T M R - 1 1 0 0 0 0 0 2 0 0 1 0 1 0 0 0 1 0 1 1 0 0 9 0 0 1 966.49569 P16528 P16528 266 274 iclR Acetate operon repressor yes yes 2 2.9913E-18 139.28 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 2 188050000 25214000 22153000 11682000 0 20183000 18811000 42270000 47740000 4874 285 5352;5353 29159;29160;29161;29162;29163;29164;29165;29166;29167;29168;29169;29170;29171 22039;22040;22041;22042;22043;22044;22045;22046;22047 22046 233 9 387400000 337830000 99262000 0 310740000 285110000 325320000 273970000 VTLEPLER PRLVDIEQVSSTHAKVTLEPLERGFGHTLG VSSTHAKVTLEPLERGFGHTLGNALRRILL K V T E R G 0 1 0 0 0 0 2 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 8 0 2 1 955.53385 P0A7Z4 P0A7Z4 26 33 rpoA DNA-directed RNA polymerase subunit alpha yes yes 2 0.00067824 100.45 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 44384000 11446000 11117000 0 0 9862100 11959000 0 0 4875 135 5354 29172;29173;29174;29175 22048;22049;22050;22051 22050 4 11446000 11379000 0 0 11897000 13248000 0 0 VTMQNLNDR GGFGGDGGLLSGNEKVTMQNLNDRLASYLD LSGNEKVTMQNLNDRLASYLDKVRALEESN K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 0 0 1089.5237 CON__P02533;CON__A2A4G1;CON__Q3ZAW8;CON__Q9Z2K1;CON__Q7Z3Y9;CON__P08779;CON__P13645;CON__P02535-1;CON__Q7Z3Y7;CON__Q7Z3Y8;CON__Q148H6;CON__Q7Z3Z0 CON__P13645 148 156 no no 2 0.00010271 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 144430000 24487000 27748000 0 0 47502000 44693000 0 0 + 4876 12;4;10;20 5355 29176;29177;29178;29179 22052;22053;22054;22055 22053 1 4 24487000 28403000 0 0 57302000 49509000 0 0 VTQLRHGVQE EVSSSGQEVQSSAKEVTQLRHGVQELEIEL SSAKEVTQLRHGVQELEIELQSQLSKKAAL E V T Q E L 0 1 0 0 0 2 1 1 1 0 1 0 0 0 0 0 1 0 0 2 0 0 10 1 0 0 1165.6204 CON__P35527 CON__P35527 370 379 yes yes 2;3 7.7129E-08 130.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 361700000 12805000 13126000 34810000 38430000 19691000 27489000 89357000 126000000 + 4877 15 5356 29180;29181;29182;29183;29184;29185;29186;29187;29188;29189;29190;29191;29192;29193;29194;29195 22056;22057;22058;22059;22060;22061;22062 22061 7 196750000 200170000 295770000 291360000 303170000 416630000 687710000 723070000 VTRNTLANAKE KARLQELARLLGGSEVTRNTLANAKELLAA GGSEVTRNTLANAKELLAA___________ E V T K E L 2 1 2 0 0 0 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 11 2 0 2 1215.6571 P05824 P05824 539 549 recN DNA repair protein RecN yes yes 3 0.0034358 51.841 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 177410000 8613100 11132000 31890000 33567000 2902000 4519200 37136000 47648000 4878 49 5357 29196;29197;29198;29199;29200;29201;29202;29203 22063 22063 1 132340000 169760000 270970000 254490000 44679000 68495000 285800000 273440000 VTSPISGR KAAVETARINLAYTKVTSPISGRIGKSNVT INLAYTKVTSPISGRIGKSNVTEGALVQNG K V T G R I 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 1 0 0 8 0 0 1 815.45012 P0AE06 P0AE06 176 183 acrA Multidrug efflux pump subunit AcrA yes yes 2 0.0022971 63.565 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 8111000 1192000 0 0 0 6919000 0 0 0 4879 232 5358 29204;29205;29206;29207 22064;22065;22066 22066 3 18315000 0 0 0 8346400 0 0 0 VTSYIGGEGHNLQE ALRKVCRVRLTNGFEVTSYIGGEGHNLQEH EVTSYIGGEGHNLQEHSVILIRGGRVKDLP E V T Q E H 0 0 1 0 0 1 2 3 1 1 1 0 0 0 0 1 1 0 1 1 0 0 14 0 1 0 1502.7001 P0A7S3 P0A7S3 63 76 rpsL 30S ribosomal protein S12 yes yes 2 0.0039024 42.743 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 19837000 0 0 3991700 4708500 2165300 2223600 2439800 4308400 4880 122 5359 29208;29209;29210;29211;29212;29213 22067 22067 1 0 0 33917000 35697000 33336000 33702000 18778000 24725000 VTTGLDRFAAACE NVVRFAPALNVSEEEVTTGLDRFAAACEHF EEVTTGLDRFAAACEHFVSRGSS_______ E V T C E H 3 1 0 1 1 0 1 1 0 0 1 0 0 1 0 0 2 0 0 1 0 0 13 1 0 3 1409.6609 P77581 P77581 386 398 astC Succinylornithine transaminase yes yes 2 3.0826E-08 79.659 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 1 1 26715000 2187800 3133100 5243600 4305100 2032100 0 4043100 5769900 4881 437 5360 29214;29215;29216;29217;29218;29219;29220;29221 22068;22069;22070;22071;22072;22073 22071 6 33615000 47780000 44554000 32639000 31287000 0 31116000 33113000 VTTNPGQPMQPIAK EHHLGADGADRIEFRVTTNPGQPMQPIAKV RVTTNPGQPMQPIAKVASGGELSRIALAIQ R V T A K V 1 0 1 0 0 2 0 1 0 1 0 1 1 0 3 0 2 0 0 1 0 0 14 0 0 4 1480.7708 P05824 P05824 416 429 recN DNA repair protein RecN yes yes 2 1.6504E-62 163.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 52802000 16943000 14594000 0 0 10724000 10540000 0 0 4882 49 5361 29222;29223;29224;29225 22074;22075;22076;22077 22075 4 16943000 14939000 0 0 12936000 11676000 0 0 VTTPVTVRGLRVTKGARAAIE IGIQIEFAKVILAGEVTTPVTVRGLRVTKG VRGLRVTKGARAAIEAAGGKIEE_______ E V T I E A 3 3 0 0 0 0 1 2 0 1 1 1 0 0 1 0 4 0 0 4 0 0 21 4 0 4 2194.291 P02413 P02413 116 136 rplO 50S ribosomal protein L15 yes yes 4;5 0.00039381 30.094 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 1 2 2 139520000 2483500 6448200 16539000 28315000 7132300 3538100 32804000 42259000 4883 37 5362 29226;29227;29228;29229;29230;29231;29232;29233;29234;29235;29236;29237;29238;29239 22078;22079;22080;22081;22082;22083;22084;22085;22086;22087;22088 22084 11 38159000 98336000 140530000 214670000 109810000 53625000 252460000 242520000 VTVDGEIVR GVSRAIAGREIRGNRVTVDGEIVRNAAFKL EIRGNRVTVDGEIVRNAAFKLLPEHDVAYD R V T V R N 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 3 0 0 9 0 1 0 986.53966 P0AA43 P0AA43 27 35 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 2.476E-75 187.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1894400000 614020000 658330000 0 0 6104900 615930000 0 0 4884 183 5363 29240;29241;29242;29243 22089;22090;22091;22092 22089 2 614020000 673870000 0 0 7364400 682310000 0 0 VTVKRLKKQGNKVE DVRNGQVVVARIDDEVTVKRLKKQGNKVEL EVTVKRLKKQGNKVELLPENSEFKPIVVDL E V T V E L 0 1 1 0 0 1 1 1 0 0 1 4 0 0 0 0 1 0 0 3 0 0 14 5 0 0 1625.9941 P0A7C2 P0A7C2 153 166 lexA LexA repressor yes yes 4 0.0081194 24.425 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 13961000 0 0 2186300 2232400 0 0 4153000 5389300 4885 101 5364 29244;29245;29246;29247 22093 22093 1 0 0 18577000 16925000 0 0 31963000 30928000 VTVQSLDVVR VFKGKKMAGQMGNERVTVQSLDVVRVDAER MGNERVTVQSLDVVRVDAERNLLLVKGAVP R V T V R V 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 4 0 0 10 0 0 0 1114.6346 P60438 P60438 170 179 rplC 50S ribosomal protein L3 yes yes 2 5.9516E-151 218.73 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 1 1 479480000 133430000 128950000 7281800 8622900 65915000 118960000 6978500 9349500 4886 380 5365 29248;29249;29250;29251;29252;29253;29254;29255;29256;29257;29258 22094;22095;22096 22094 3 172150000 165170000 61873000 65375000 79513000 144380000 53708000 53655000 VVADFLSSVGVDR QDRRVRSARVPITAKVVADFLSSVGVDRVL AKVVADFLSSVGVDRVLTVDLHAEQIQGFF K V V D R V 1 1 0 2 0 0 0 1 0 0 1 0 0 1 0 2 0 0 0 4 0 0 13 0 0 1 1362.7143 P0A717 P0A717 112 124 prs Ribose-phosphate pyrophosphokinase yes yes 2 2.7489E-27 141.88 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 138030000 35722000 29618000 0 0 32601000 40092000 0 0 4887 91 5366 29259;29260;29261;29262 22097;22098;22099;22100 22100 4 35722000 30317000 0 0 39327000 44413000 0 0 VVADIAGVPAQINIAEVR IVIGKKGEDVEKLRKVVADIAGVPAQINIA DIAGVPAQINIAEVRKPELDAKLVADSITS K V V V R K 4 1 1 1 0 1 1 1 0 3 0 0 0 0 1 0 0 0 0 4 0 0 18 0 1 5 1834.0312 P0A7V3 P0A7V3 90 107 rpsC 30S ribosomal protein S3 yes yes 2 6.0613E-63 154.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 149410000 37186000 22734000 0 0 43207000 46282000 0 0 4888 129 5367 29263;29264;29265;29266 22101;22102;22103;22104 22104 4 37186000 23271000 0 0 52120000 51271000 0 0 VVAILLNDEVR SLSLYAIPDGDVKGRVVAILLNDEVRSADL VKGRVVAILLNDEVRSADLLAILKALKAKG R V V V R S 1 1 1 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 3 0 0 11 0 1 1 1239.7187 P21179 P21179 602 612 katE Catalase HPII yes yes 2 9.6735E-53 171.36 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 166530000 47435000 27077000 0 0 48014000 44007000 0 0 4889 293 5368 29267;29268;29269;29270 22105;22106;22107;22108 22106 4 47435000 27717000 0 0 57920000 48750000 0 0 VVALGGGHGLGR ______________________________ LDRVVALGGGHGLGRVLSSLSSLGSRLTGI R V V G R V 1 1 0 0 0 0 0 5 1 0 2 0 0 0 0 0 0 0 0 2 0 0 12 0 0 1 1091.62 P75767 P75767 12 23 ybhK Putative gluconeogenesis factor yes yes 3 0.0063058 26.012 By MS/MS 1 0 0 0 0 0 0 0 0 0 4890 407 5369 29271 22109 22109 1 0 0 0 0 0 0 0 0 VVAQPAAPVVAE EEVVETAEVVVAEPEVVAQPAAPVVAEVAA EPEVVAQPAAPVVAEVAAEVETVAAVEPEV E V V A E V 4 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 4 0 0 12 0 0 6 1149.6394 P21513 P21513 973 984 rne Ribonuclease E yes yes 2 0.0042421 51.193 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24498000 0 0 4038500 5204500 0 0 7303800 7951500 4891 297 5370 29272;29273;29274;29275 22110;22111 22110 2 0 0 34315000 39458000 0 0 56212000 45633000 VVASMQDPNPQVAGR TPPCCDALIAAGVARVVASMQDPNPQVAGR VVASMQDPNPQVAGRGLYRLQQAGIDVSHG R V V G R G 2 1 1 1 0 2 0 1 0 0 0 0 1 0 2 1 0 0 0 3 0 0 15 0 0 4 1567.7777 P25539 P25539 96 110 ribD Riboflavin biosynthesis protein RibD;Diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase yes yes 2 3.9873E-52 162.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 89772000 21311000 29193000 0 0 20228000 19041000 0 0 4892 315 5371 29276;29277;29278;29279 22112;22113;22114;22115 22113 4 21311000 29882000 0 0 24401000 21093000 0 0 VVATATLR LFAERLQDIPPSQIRVVATATLRLAVNAGD IPPSQIRVVATATLRLAVNAGDFIAKAQEI R V V L R L 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 2 0 0 8 0 0 2 829.50215 P25552 P25552 81 88 gppA Guanosine-5-triphosphate,3-diphosphate pyrophosphatase yes yes 2 0.019011 47.082 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 202110000 59448000 56932000 0 0 43735000 41991000 0 0 4893 316 5372 29280;29281;29282;29283 22116 22116 1 59448000 58276000 0 0 52758000 46516000 0 0 VVATPKALKKALE AYRWKATTPVMQQKEVVATPKALKKALEHE KEVVATPKALKKALEHEKTPELAAKLAAEA E V V L E H 3 0 0 0 0 0 1 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 13 3 0 4 1366.8548 P06710 P06710 490 502 dnaX DNA polymerase III subunit tau yes yes 3;4 0.002261 49.423 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 2 2 77237000 5070100 4984200 3454500 6350400 1558900 1333100 24156000 30329000 4894 51 5373 29284;29285;29286;29287;29288;29289;29290;29291;29292;29293 22117;22118;22119 22118 3 77901000 76010000 29353000 48146000 24001000 20205000 185910000 174050000 VVAVGLPPESMSLDIPR AAFNSAVDAVRAGGRVVAVGLPPESMSLDI AVGLPPESMSLDIPRLVLDGIEVVGSLVGT R V V P R L 1 1 0 1 0 0 1 1 0 1 2 0 1 0 3 2 0 0 0 3 0 0 17 0 1 4 1778.9601 P39451 P39451 255 271 adhP Alcohol dehydrogenase, propanol-preferring yes yes 2 3.7882E-11 111.63 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 58932000 13626000 20473000 0 0 9949900 14882000 0 0 4895 364 5374 29294;29295;29296;29297 22120;22121;22122;22123 22121 4 13626000 20957000 0 0 12003000 16486000 0 0 VVDGVGILR APHHWHFINMRIWPRVVDGVGILRGIEANI MRIWPRVVDGVGILRGIEANIKNVDGEIDC R V V L R G 0 1 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 3 0 0 9 0 0 0 926.55492 P75914 P75914 62 70 ycdX Probable phosphatase YcdX yes yes 2 1.17E-24 125.25 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 4896 412 5375 29298;29299 22124;22125 22125 2 0 0 0 0 0 0 0 0 VVDNVVQTMR HLALSASETAQRGGKVVDNVVQTMRDISTS QRGGKVVDNVVQTMRDISTSSQKIADIISV K V V M R D 0 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 4 0 0 10 0 0 0 1159.6019 P02942 P02942 343 352 tsr Methyl-accepting chemotaxis protein I yes yes 2 0.0027442 36.395 By MS/MS 1 0 0 0 0 0 0 0 0 0 4897 39 5376 29300 22126 22126 68 44 0 0 0 0 0 0 0 0 0 VVDQLAHIDLTLAQAVAK SFELSKVVRPYIRERVVDQLAHIDLTLAQA QLAHIDLTLAQAVAKNLGIELTDDQLNITP R V V A K N 4 0 0 2 0 2 0 0 1 1 3 1 0 0 0 0 1 0 0 3 0 0 18 0 0 4 1904.0731 P21179 P21179 543 560 katE Catalase HPII yes yes 2;3 7.2996E-53 148.56 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 138620000 16230000 22144000 0 0 39122000 61125000 0 0 4898 293 5377 29301;29302;29303;29304;29305;29306;29307 22127;22128;22129;22130;22131 22129 5 16230000 22667000 0 0 47193000 67713000 0 0 VVEEAPAPGITPELR YLAERDCSMQRRHQKVVEEAPAPGITPELR VVEEAPAPGITPELRRYIGERCAKACVDIG K V V L R R 2 1 0 0 0 0 3 1 0 1 1 0 0 0 3 0 1 0 0 2 0 0 15 0 3 5 1576.8461 P24182 P24182 239 253 accC Biotin carboxylase yes yes 2 0.0029002 51.286 By MS/MS By MS/MS By matching By matching 1 1 1 1 17150000 4981600 4551000 0 0 3119600 4498300 0 0 4899 309 5378 29308;29309;29310;29311 22132 22132 1 4981600 4658500 0 0 3763100 4983100 0 0 VVEKLLGAKTE PIPGYECPPNHQLVEVVEKLLGAKTEVVNY QLVEVVEKLLGAKTEVVNYCTEAPFIQTLC E V V T E V 1 0 0 0 0 0 2 1 0 0 2 2 0 0 0 0 1 0 0 2 0 0 11 2 1 1 1185.6969 P23908 P23908 316 326 argE Acetylornithine deacetylase yes yes 2;3 1.9364E-07 110.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 2 2 380130000 5307900 4925300 68323000 70777000 16713000 14945000 87739000 111400000 4900 308 5379 29312;29313;29314;29315;29316;29317;29318;29319;29320;29321;29322;29323;29324;29325 22133;22134;22135;22136;22137;22138;22139;22140;22141;22142;22143 22135 11 81554000 75112000 580530000 536600000 257310000 226510000 675260000 639330000 VVEPLITLAK EIIKTTLPKAKELRRVVEPLITLAKTDSVA KELRRVVEPLITLAKTDSVANRRLAFARTR R V V A K T 1 0 0 0 0 0 1 0 0 1 2 1 0 0 1 0 1 0 0 2 0 0 10 0 1 2 1081.6747 P0AG44 P0AG44 47 56 rplQ 50S ribosomal protein L17 yes yes 2 5.0959E-06 107.57 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 310290000 71545000 64662000 0 0 93319000 80769000 0 0 4901 257 5380 29326;29327;29328;29329 22144;22145;22146;22147 22145 4 71545000 66188000 0 0 112570000 89474000 0 0 VVERLEYDPNRSA YRIVDFKRNKDGIPAVVERLEYDPNRSANI PAVVERLEYDPNRSANIALVLYKDGERRYI A V V S A N 1 2 1 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 13 2 2 1 1546.774 P60422 P60422 77 89 rplB 50S ribosomal protein L2 yes yes 3 1.2408E-06 72.496 By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 30554000 7503700 8950500 0 0 1075400 13025000 0 0 4902 379 5381 29330;29331;29332;29333;29334;29335;29336 22148;22149;22150 22150 3 30790000 33200000 0 0 1531100 18019000 0 0 VVERPASVVKE QVLPPQLANQIAAGEVVERPASVVKELVEN AAGEVVERPASVVKELVENSLDAGATRIDI E V V K E L 1 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 4 0 0 11 2 1 2 1211.6874 P23367 P23367 19 29 mutL DNA mismatch repair protein MutL yes yes 3 0.0016833 51.092 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 67805000 5378300 5700800 9958600 12608000 3363300 5107900 10801000 14887000 4903 302 5382 29337;29338;29339;29340;29341;29342;29343;29344 22151;22152;22153;22154 22153 4 82637000 86938000 84617000 95590000 51781000 77418000 83126000 85432000 VVESSSYYGK KHPLRHHFPPFAGFRVVESSSYYGKGYQDV FAGFRVVESSSYYGKGYQDVEHRKPSIRNA R V V G K G 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 0 2 2 0 0 10 0 1 0 1117.5292 P77398 P77398 602 611 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2 0.00067938 76.827 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9156700000 2187900000 3163700000 0 0 2054300000 1750900000 0 0 4904 432 5383 29345;29346;29347;29348 22155;22156;22157;22158 22156 4 2187900000 3238300000 0 0 2478100000 1939600000 0 0 VVFVDESPMAVASSR GVIGLTLLDKNPQAKVVFVDESPMAVASSR VVFVDESPMAVASSRLNVETNMPEALDRCE K V V S R L 2 1 0 1 0 0 1 0 0 0 0 0 1 1 1 3 0 0 0 4 0 0 15 0 1 3 1592.7868 P42596 P42596 255 269 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 1.1961E-92 189.13 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 773240000 210650000 224030000 0 0 182050000 156500000 0 0 4905 366 5384;5385 29349;29350;29351;29352;29353;29354;29355;29356 22159;22160;22161;22162;22163;22164;22165;22166;22167 22167 296 9 210650000 229320000 0 0 219610000 173370000 0 0 VVGAWVWNR DLIVSDKIGLPGTRRVVGAWVWNRNKETVE LPGTRRVVGAWVWNRNKETVETCHAKAVVL R V V N R N 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 3 0 0 9 0 0 1 1085.577 P10902 P10902 179 187 nadB L-aspartate oxidase yes yes 2 4.8184E-05 106.42 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 55521000 19023000 17095000 0 0 7855500 11548000 0 0 4906 274 5386 29357;29358;29359;29360 22168;22169;22170 22168 2 19023000 17499000 0 0 9476200 12792000 0 0 VVGLEYR ILNAQTTEVKGDGSKVVGLEYRDRVSGDIH EVKGDGSKVVGLEYRDRVSGDIHNIELAGI K V V Y R D 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 2 0 0 7 0 1 0 834.45995 P35340 P35340 424 430 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 1.7544E-34 160.69 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1476300000 459810000 353640000 0 0 320440000 342420000 0 0 4907 348 5387 29361;29362;29363;29364 22171;22172;22173;22174 22172 4 459810000 361980000 0 0 386550000 379330000 0 0 VVGQLGQVLGPR EMNFDVVIASPDAMRVVGQLGQVLGPRGLM AMRVVGQLGQVLGPRGLMPNPKVGTVTPNV R V V P R G 0 1 0 0 0 2 0 3 0 0 2 0 0 0 1 0 0 0 0 3 0 0 12 0 0 1 1221.7194 P0A7L0 P0A7L0 123 134 rplA 50S ribosomal protein L1 yes yes 2 4.4795E-70 178.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 130100000 27322000 25328000 0 0 34711000 42740000 0 0 4908 110 5388 29365;29366;29367;29368 22175;22176;22177;22178 22177 4 27322000 25926000 0 0 41872000 47346000 0 0 VVIDESVIDGQSKPLLIYGKPEAQQASGE LDTMYDLPSMEDVEKVVIDESVIDGQSKPL LLIYGKPEAQQASGE_______________ K V V G E - 2 0 0 2 0 3 3 3 0 3 2 2 0 0 2 3 0 0 1 3 0 0 29 2 2 4 3069.587 P0A6H1 P0A6H1 396 424 clpX ATP-dependent Clp protease ATP-binding subunit ClpX yes yes 3 6.8928E-08 45.611 By MS/MS By MS/MS By MS/MS 1 1 1 34568000 12089000 11062000 0 0 0 11417000 0 0 4909 70 5389 29369;29370;29371 22179;22180;22181 22181 3 12089000 11323000 0 0 0 12648000 0 0 VVINKDTTTIIDGVGEEAAIQGR ELEKATLEDLGQAKRVVINKDTTTIIDGVG TIIDGVGEEAAIQGRVAQIRQQIEEATSDY R V V G R V 2 1 1 2 0 1 2 3 0 4 0 1 0 0 0 0 3 0 0 3 0 0 23 1 2 2 2398.2704 P0A6F5 P0A6F5 323 345 groL 60 kDa chaperonin yes yes 3 7.9395E-86 164.94 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 358640000 138690000 101940000 0 0 47037000 70976000 0 0 4910 68 5390 29372;29373;29374;29375 22182;22183;22184;22185 22182 4 138690000 104340000 0 0 56741000 78625000 0 0 VVIQHNWHELR LPPWDESRVENPDERVVIQHNWHELRLFMW PDERVVIQHNWHELRLFMWDYVGIVRTTKR R V V L R L 0 1 1 0 0 1 1 0 2 1 1 0 0 0 0 0 0 1 0 2 0 0 11 0 1 0 1429.7579 P10902 P10902 434 444 nadB L-aspartate oxidase yes yes 3;4 5.9878E-08 108.7 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 223650000 54099000 60969000 0 0 50407000 58181000 0 0 4911 274 5391 29376;29377;29378;29379;29380;29381;29382;29383 22186;22187;22188;22189;22190;22191;22192;22193 22187 8 54099000 62408000 0 0 60806000 64451000 0 0 VVIQLQE NVLNNKPVSLGQALEVVIQLQEKHVKDEQI VSLGQALEVVIQLQEKHVKDEQIEHWKKIV E V V Q E K 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 0 2 0 0 7 0 0 0 827.47527 LSD1-FL-His LSD1-FL-His 416 422 yes yes 1;2 3.8124E-88 170.31 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 1 1 4114400000 969680000 0 394240000 496060000 774360000 714240000 310100000 455740000 4912 24 5392 29384;29385;29386;29387;29388;29389;29390;29391 22194;22195;22196;22197;22198 22198 3 14899000000 0 3349800000 3760900000 11922000000 10825000000 2386600000 2615400000 VVISGLQK GDKWLVTEGLKAGDRVVISGLQKVRPGVQV GLKAGDRVVISGLQKVRPGVQVKAQEVTAD R V V Q K V 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 8 0 0 0 842.52255 P0AE06 P0AE06 359 366 acrA Multidrug efflux pump subunit AcrA yes yes 2 0.0024346 82.305 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 1 1 93460000 10228000 8347000 8589000 8148400 12970000 13590000 15027000 16561000 4913 232 5393 29392;29393;29394;29395;29396;29397;29398;29399;29400 22199;22200;22201;22202 22199 4 21577000 8544000 72979000 61778000 15645000 15055000 115650000 95043000 VVKKLMTE ______________________________ HDYYKDEVVKKLMTEFNYNSVMQVPRVEKI E V V T E F 0 0 0 0 0 0 1 0 0 0 1 2 1 0 0 0 1 0 0 2 0 0 8 2 0 0 946.55214 P62399 P62399 12 19 rplE 50S ribosomal protein L5 yes yes 2 0.0086323 66.682 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 32772000 2895400 3014700 6436000 6179400 0 1696900 4468900 8080700 4914 388 5394 29401;29402;29403;29404;29405;29406;29407 22203;22204 22203 2 44488000 45974000 54686000 46849000 0 25719000 34394000 46374000 VVKPATMSNNAE IVKFSPNEQNKHIGEVVKPATMSNNAETQV IGEVVKPATMSNNAETQVNQNITVTGYPGD E V V A E T 2 0 2 0 0 0 1 0 0 0 0 1 1 0 1 1 1 0 0 2 0 0 12 1 0 3 1259.618 CON__P0C1U8 CON__P0C1U8 179 190 yes yes 2 1.1965E-41 172.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 2 3 4 3 32222000000 4334300000 4398500000 16231000 2178700000 2018600000 1737200000 3710300000 13828000000 + 4915 11 5395;5396 29408;29409;29410;29411;29412;29413;29414;29415;29416;29417;29418;29419;29420;29421;29422;29423;29424;29425;29426;29427;29428;29429;29430;29431 22205;22206;22207;22208;22209;22210;22211;22212;22213;22214;22215;22216;22217;22218;22219;22220;22221;22222;22223;22224;22225;22226;22227 22220 11 23 66596000000 67077000000 137910000 16518000000 31079000000 26330000000 28555000000 79357000000 VVKPGGWVITATPGPR IIRIYAPCKAEELARVVKPGGWVITATPGP VKPGGWVITATPGPRHLMELKGLIYNEVHL R V V P R H 1 1 0 0 0 0 0 3 0 1 0 1 0 0 3 0 2 1 0 3 0 0 16 1 0 4 1633.9304 P36999 P36999 167 182 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2;3 3.7241E-57 132.44 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1063500000 261310000 245980000 0 0 246440000 309740000 0 0 4916 352 5397 29432;29433;29434;29435;29436;29437;29438;29439 22228;22229;22230;22231;22232;22233;22234;22235 22234 8 261310000 251780000 0 0 297280000 343120000 0 0 VVKVRSHMPE LKALIEQRLEGVTAEVVKVRSHMPEILQWQ GVTAEVVKVRSHMPEILQWQRERLVAKLED E V V P E I 0 1 0 0 0 0 1 0 1 0 0 1 1 0 1 1 0 0 0 3 0 0 10 2 0 1 1180.6387 P23839 P23839 167 176 yicC UPF0701 protein YicC yes yes 2 1.5058E-05 96.492 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 4917 306 5398 29440;29441;29442 22236;22237 22236 25 0 0 0 0 0 0 0 0 0 VVLCFDR KTSAVQRMGFGNLNKVVLCFDRVFWDPSVN MGFGNLNKVVLCFDRVFWDPSVNLFGHVGS K V V D R V 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 7 0 0 0 907.45857 LSD1-FL-His LSD1-FL-His 664 670 yes yes 2 6.2013E-34 155.73 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5861800000 1788900000 1394200000 0 0 1306800000 1371900000 0 0 4918 24 5399 29443;29444;29445;29446 22238;22239;22240;22241 22239 4 1788900000 1427100000 0 0 1576400000 1519700000 0 0 VVLESLGSIK MIKFAALAGAIDEEKVVLESLGSIKRAGAD IDEEKVVLESLGSIKRAGADLIFSYFALDL K V V I K R 0 0 0 0 0 0 1 1 0 1 2 1 0 0 0 2 0 0 0 2 0 0 10 0 1 0 1043.6227 P0ACB2 P0ACB2 293 302 hemB Delta-aminolevulinic acid dehydratase yes yes 2 0.00042617 85.731 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32634000 5477200 5202700 0 0 10559000 11395000 0 0 4919 207 5400 29447;29448;29449;29450 22242;22243;22244 22243 3 5477200 5325500 0 0 12737000 12623000 0 0 VVLSNPPALPPR VLRELGFNVRSLLGRVVLSNPPALPPRTHR LGRVVLSNPPALPPRTHRLLLVELEEEKWI R V V P R T 1 1 1 0 0 0 0 0 0 0 2 0 0 0 4 1 0 0 0 2 0 0 12 0 0 5 1258.7398 P77567 P77567 94 105 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2 1.4219E-06 86.67 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 74742000 18048000 10163000 0 0 28388000 18143000 0 0 4920 436 5401 29451;29452;29453;29454 22245;22246;22247;22248 22248 4 18048000 10403000 0 0 34245000 20098000 0 0 VVMTADAVK DATGIDPVSLIAFDKVVMTADAVKQVEEML LIAFDKVVMTADAVKQVEEMLA________ K V V V K Q 2 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 3 0 0 9 0 0 2 932.5001 P60723 P60723 186 194 rplD 50S ribosomal protein L4 yes yes 2 0.0013701 87.181 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 225420000 65311000 70222000 0 0 43348000 46536000 0 0 4921 383 5402 29455;29456;29457;29458 22249;22250;22251;22252 22250 4 65311000 71879000 0 0 52290000 51551000 0 0 VVMTGPSK TDETARKHITAGAKKVVMTGPSKDNTPMFV ITAGAKKVVMTGPSKDNTPMFVKGANFDKY K V V S K D 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 2 0 0 8 0 0 1 817.43677 P0A9B2 P0A9B2 117 124 gapA Glyceraldehyde-3-phosphate dehydrogenase A yes yes 2 0.021665 45.335 By MS/MS By matching 1 1 3534100 0 0 0 0 1827400 1706700 0 0 4922 163 5403 29459;29460 22253 22253 1 0 0 0 0 2204500 1890600 0 0 VVNDNAPQTAK HGMAPLTQEQKPVAKVVNDNAPQTAKEPDY PVAKVVNDNAPQTAKEPDYLDIPAFLRKQA K V V A K E 2 0 2 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 2 0 0 11 0 0 3 1155.5884 P0A9A6 P0A9A6 357 367 ftsZ Cell division protein FtsZ yes yes 2 0.00013315 85.731 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 28460000 6498200 4372800 0 0 4195600 3766100 5073900 4553200 4923 161 5404 29461;29462;29463;29464;29465;29466 22254;22255;22256;22257 22255 4 6498200 4476000 0 0 5061200 4172000 39050000 26130000 VVNIASYQVSPNDVVSIR ARQLVSHKAIMVNGRVVNIASYQVSPNDVV IASYQVSPNDVVSIREKAKKQSRVKAALEL R V V I R E 1 1 2 1 0 1 0 0 0 2 0 0 0 0 1 3 0 0 1 5 0 0 18 0 0 2 1959.0425 P0A7V8 P0A7V8 129 146 rpsD 30S ribosomal protein S4 yes yes 2;3 0 292.03 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 720690000 182970000 151390000 0 0 175560000 210760000 0 0 4924 130 5405 29467;29468;29469;29470;29471;29472 22258;22259;22260;22261;22262;22263;22264 22258 7 182970000 154960000 0 0 211780000 233480000 0 0 VVNPELHK VKCKPTSPGRRHVVKVVNPELHKGKPFAPL GRRHVVKVVNPELHKGKPFAPLLEKNSKSG K V V H K G 0 0 1 0 0 0 1 0 1 0 1 1 0 0 1 0 0 0 0 2 0 0 8 0 1 1 934.52362 P60422 P60422 19 26 rplB 50S ribosomal protein L2 yes yes 2 2.7839E-07 117.16 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2069700000 485330000 648900000 0 0 530000000 405510000 0 0 4925 379 5406 29473;29474;29475;29476 22265;22266;22267;22268 22266 4 485330000 664210000 0 0 639340000 449210000 0 0 VVNQASHVSAK DVAEYAGVSYQTVSRVVNQASHVSAKTREK TVSRVVNQASHVSAKTREKVEAAMAELNYI R V V A K T 2 0 1 0 0 1 0 0 1 0 0 1 0 0 0 2 0 0 0 3 0 0 11 0 0 2 1138.6095 B8LFD5;P03023 B8LFD5 26 36 lacI Lactose operon repressor yes no 2 0.021411 38.086 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5397200 2070100 1937600 0 0 927170 462350 0 0 4926 0 5407 29477;29478;29479;29480 22269;22270 22270 2 2070100 1983300 0 0 1118400 512180 0 0 VVNTLGAPIDGK GRILEVPVGRGLLGRVVNTLGAPIDGKGPL LGRVVNTLGAPIDGKGPLDHDGFSAVEAIA R V V G K G 1 0 1 1 0 0 0 2 0 1 1 1 0 0 1 0 1 0 0 2 0 0 12 0 0 2 1182.6608 P0ABB0 P0ABB0 107 118 atpA ATP synthase subunit alpha yes yes 2 1.5389E-09 110.38 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 41094000 4920600 4876700 0 0 14197000 17099000 0 0 4927 193 5408 29481;29482;29483;29484 22271;22272;22273;22274 22274 3 4920600 4991800 0 0 17126000 18942000 0 0 VVQMLLGHSDLSTTQIYTHVATER HAFATHLLNHGADLRVVQMLLGHSDLSTTQ DLSTTQIYTHVATERLRQLHQQHHPRA___ R V V E R L 1 1 0 1 0 2 1 1 2 1 3 0 1 0 0 2 4 0 1 3 0 0 24 0 1 1 2698.3748 P0A8P8 P0A8P8 263 286 xerD Tyrosine recombinase XerD yes yes 3;4 1.636E-207 219.07 By MS/MS By MS/MS By MS/MS By MS/MS 2 5 4 5 228370000 42137000 60948000 0 0 52110000 73179000 0 0 4928 151 5409;5410;5411 29485;29486;29487;29488;29489;29490;29491;29492;29493;29494;29495;29496;29497;29498;29499;29500 22275;22276;22277;22278;22279;22280;22281;22282;22283;22284;22285 22278 151 18;48;49 10 42137000 62387000 0 0 62860000 81066000 0 0 VVRPYIR EQRHIVDGFSFELSKVVRPYIRERVVDQLA GFSFELSKVVRPYIRERVVDQLAHIDLTLA K V V I R E 0 2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 2 0 0 7 1 0 1 901.54977 P21179 P21179 534 540 katE Catalase HPII yes yes 2 0.015627 65.263 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35043000 10319000 12164000 0 0 6185200 6375400 0 0 4929 293 5412 29501;29502;29503;29504 22286;22287;22288 22287 2 10319000 12451000 0 0 7461200 7062500 0 0 VVSKQVNMELA LGAMVVTGLGGNPMAVVSKQVNMELAKIKQ NPMAVVSKQVNMELAKIKQKCPLYEANGQA A V V L A K 1 0 1 0 0 1 1 0 0 0 1 1 1 0 0 1 0 0 0 3 0 0 11 1 1 0 1216.6486 LSD1-FL-His LSD1-FL-His 346 356 yes yes 2 2.7883E-27 146.48 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 2 1901500000 178450000 155210000 1669300 0 977030000 589100000 0 0 4930 24 5413;5414 29505;29506;29507;29508;29509;29510;29511;29512;29513 22289;22290;22291;22292;22293;22294 22293 48 5 1077200000 928940000 14184000 0 1391000000 839760000 0 0 VVSKQVNMELAKIKQKCP LGAMVVTGLGGNPMAVVSKQVNMELAKIKQ KQVNMELAKIKQKCPLYEANGQAVPKEKDE A V V C P L 1 0 1 0 1 2 1 0 0 1 1 4 1 0 1 1 0 0 0 3 0 0 18 4 1 1 2099.1595 LSD1-FL-His LSD1-FL-His 346 363 yes yes 4;5 0.00041749 39.143 By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 2 1 40346000 403920 526910 0 0 19309000 13500000 6605600 0 4931 24 5415 29514;29515;29516;29517;29518;29519;29520 22295;22296;22297 22295 3 2438300 3153500 0 0 27490000 19244000 50838000 0 VVVLENDLHRHA LEEALTELETGRADAVVVLENDLHRHASAI ADAVVVLENDLHRHASAIRVNAALAKAPLV A V V H A S 1 1 1 1 0 0 1 0 2 0 2 0 0 0 0 0 0 0 0 3 0 0 12 1 1 0 1400.7524 P33602 P33602 564 575 nuoG NADH-quinone oxidoreductase subunit G yes yes 3 0.006783 44.299 By MS/MS By MS/MS By MS/MS 1 1 1 5419900 1437100 0 0 0 905590 3077200 0 0 4932 345 5416 29521;29522;29523 22298;22299 22299 2 8675300 0 0 0 1289300 4386600 0 0 VWALFNK ERRLMYVALTRARHRVWALFNKENPSPFVE ALTRARHRVWALFNKENPSPFVEILKNLDV R V W N K E 1 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 7 0 0 1 876.48577 P15038 P15038 657 663 helD Helicase IV yes yes 2 0.00069426 105.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 37207000 241460 15262000 0 0 9435100 12268000 0 0 4933 281 5417 29524;29525;29526;29527;29528;29529;29530 22300;22301;22302;22303 22303 4 1457600 16667000 0 0 25367000 13590000 0 0 VWFAMPDGNIK NGDIGIALDRGQGTRVWFAMPDGNIKSVQP QGTRVWFAMPDGNIKSVQPSRLPEHETTWA R V W I K S 1 0 1 1 0 0 0 1 0 1 0 1 1 1 1 0 0 1 0 1 0 0 11 0 0 2 1276.6274 P04993 P04993 510 520 recD RecBCD enzyme subunit RecD yes yes 2 1.6645E-07 83.005 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 14768000 0 5776600 0 0 3699700 5291900 0 0 4934 46 5418 29531;29532;29533;29534 22304;22305;22306;22307 22304 4 0 5912900 0 0 4463000 5862300 0 0 VWHIEGGIIEYAR CEKASAWMKHNGFNKVWHIEGGIIEYARKA NKVWHIEGGIIEYARKAREQGLPVRFIGKN K V W A R K 1 1 0 0 0 0 2 2 1 3 0 0 0 0 0 0 0 1 1 1 0 0 13 0 2 1 1541.7991 P24188 P24188 221 233 yceA UPF0176 protein YceA yes yes 3 0.0016539 51.218 By MS/MS By MS/MS By matching By matching 1 1 1 1 15507000 4589600 3829000 0 0 3307600 3781200 0 0 4935 310 5419 29535;29536;29537;29538 22308;22309 22308 2 4589600 3919400 0 0 3990000 4188700 0 0 VWPNEMPADLHK FRANTVEKTGENQYRVWPNEMPADLHKIRP QYRVWPNEMPADLHKIRPHHPLNRNLDHNW R V W H K I 1 0 1 1 0 0 1 0 1 0 1 1 1 0 2 0 0 1 0 1 0 0 12 0 1 3 1435.6918 P76104 P76104 372 383 ydcP Uncharacterized protease YdcP yes yes 3 0.015865 28.206 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24762000 8153000 5301400 0 0 3990600 7316600 0 0 4936 416 5420 29539;29540;29541;29542 22310 22310 1 8153000 5426500 0 0 4813900 8105200 0 0 VWQTLAAKE ALLQMTPFAWRAKPEVWQTLAAKEVFDCQT WRAKPEVWQTLAAKEVFDCQTDFNIHLWQR E V W K E V 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 9 1 0 2 1044.5604 P36999 P36999 244 252 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase yes yes 2 0.00073725 90.657 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 125710000 8339200 6732700 30399000 22514000 0 0 25275000 32447000 4937 352 5421 29543;29544;29545;29546;29547;29548 22311;22312;22313 22312 3 128130000 102680000 258290000 170690000 0 0 194530000 186210000 VWVVEGSK QDVPSFRPGDTVEVKVWVVEGSKKRLQAFE GDTVEVKVWVVEGSKKRLQAFEGVVIAIRN K V W S K K 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 0 3 0 0 8 0 1 0 902.48617 P0A7K6 P0A7K6 30 37 rplS 50S ribosomal protein L19 yes yes 2 1.6531E-11 127.12 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 96976000 22011000 32393000 0 0 17942000 24631000 0 0 4938 109 5422 29549;29550;29551;29552 22314;22315;22316;22317 22314 4 22011000 33157000 0 0 21643000 27285000 0 0 VYAAIEAGDK HNASRRSMMRTFIKKVYAAIEAGDKAAAQK TFIKKVYAAIEAGDKAAAQKAFNEMQPIVD K V Y D K A 3 0 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 1 0 0 10 0 1 3 1035.5237 P0A7U7 P0A7U7 35 44 rpsT 30S ribosomal protein S20 yes yes 2 8.9443E-06 107.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 185400000 49438000 44222000 0 0 49153000 42590000 0 0 4939 127 5423 29553;29554;29555;29556 22318;22319 22319 2 49438000 45266000 0 0 59293000 47181000 0 0 VYAGNEHNHAAQQPQVLDI LPKGPLGRAMFRKLKVYAGNEHNHAAQQPQ NEHNHAAQQPQVLDI_______________ K V Y D I - 3 0 2 1 0 3 1 1 2 1 1 0 0 0 1 0 0 0 1 2 0 0 19 0 1 4 2103.0134 P0AA10 P0AA10 124 142 rplM 50S ribosomal protein L13 yes yes 2;3 3.0305E-36 147.68 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1586100000 421860000 440330000 0 0 304650000 419300000 0 0 4940 182 5424 29557;29558;29559;29560;29561;29562;29563;29564 22320;22321;22322;22323;22324;22325;22326;22327;22328;22329;22330 22324 11 421860000 450730000 0 0 367500000 464490000 0 0 VYANPQRCPQINLIDRE DIGGRALLMHGTEGEVYANPQRCPQINLID ANPQRCPQINLIDREGMRVLYEKQDTAGSE E V Y R E G 1 2 2 1 1 2 1 0 0 2 1 0 0 0 2 0 0 0 1 1 0 0 17 2 0 3 2085.0426 P30177 P30177 232 248 ybiB Uncharacterized protein YbiB yes yes 3 3.6239E-11 65.107 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 36694000 0 0 9088200 10343000 0 4409600 5011600 7842200 4941 332 5425 29565;29566;29567;29568;29569 22331;22332;22333 22333 3 0 0 77221000 78415000 0 66835000 38570000 45005000 VYFAADEQTLLK QAFAEATESLHGRTRVYFAADEQTLLKNGN RTRVYFAADEQTLLKNGNQTKPKHVPGTPY R V Y L K N 2 0 0 1 0 1 1 0 0 0 2 1 0 1 0 0 1 0 1 1 0 0 12 0 1 2 1396.7238 P0AFY8 P0AFY8 119 130 seqA Negative modulator of initiation of replication yes yes 2 0.0013647 64.297 By MS/MS 1 7020600 0 7020600 0 0 0 0 0 0 4942 252 5426 29570 22334 22334 1 0 7186300 0 0 0 0 0 0 VYLIDEVHMLSR LLDNVQYAPARGRFKVYLIDEVHMLSRHSF RFKVYLIDEVHMLSRHSFNALLKTLEEPPE K V Y S R H 0 1 0 1 0 0 1 0 1 1 2 0 1 0 0 1 0 0 1 2 0 0 12 0 1 0 1473.765 P06710 P06710 122 133 dnaX DNA polymerase III subunit tau yes yes 3 8.7881E-05 70.412 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 54968000 19413000 12764000 0 0 13549000 9242900 0 0 4943 51 5427 29571;29572;29573;29574 22335;22336;22337;22338 22337 4 19413000 13065000 0 0 16344000 10239000 0 0 VYQYTTNPDISSGDGIAMAWR CHAKAVVLATGGASKVYQYTTNPDISSGDG NPDISSGDGIAMAWRAGCRVANLEFNQFHP K V Y W R A 2 1 1 2 0 1 0 2 0 2 0 0 1 0 1 2 2 1 2 1 0 0 21 0 0 3 2344.0794 P10902 P10902 210 230 nadB L-aspartate oxidase yes yes 2 1.9581E-62 152.99 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50530000 13087000 10082000 0 0 13189000 14171000 0 0 4944 274 5428 29575;29576;29577;29578 22339;22340;22341;22342 22342 4 13087000 10320000 0 0 15910000 15699000 0 0 VYSGVVNSGDTVLNSVK KIATDPFVGNLTFFRVYSGVVNSGDTVLNS SGVVNSGDTVLNSVKAARERFGRIVQMHAN R V Y V K A 0 0 2 1 0 0 0 2 0 0 1 1 0 0 0 3 1 0 1 5 0 0 17 0 0 0 1736.8945 P0A6M8 P0A6M8 338 354 fusA Elongation factor G yes yes 2 6.2171E-34 122.42 By MS/MS 1 0 0 0 0 0 0 0 0 0 4945 76 5429 29579 22343 22343 1 0 0 0 0 0 0 0 0 VYTTTPK PALEACPQKRGVCTRVYTTTPKKPNSALRK QKRGVCTRVYTTTPKKPNSALRKVCRVRLT R V Y P K K 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 3 0 1 1 0 0 7 0 0 1 808.43307 P0A7S3 P0A7S3 37 43 rpsL 30S ribosomal protein S12 yes yes 2 0.00073318 105.2 By MS/MS By MS/MS By MS/MS 1 1 1 1587800000 788690000 0 0 0 386550000 412510000 0 0 4946 122 5430 29580;29581;29582 22344;22345;22346 22345 3 788690000 0 0 0 466300000 456970000 0 0 VYYDLLEQR LDPKGVKRVVMCSGKVYYDLLEQRRKNNQH VMCSGKVYYDLLEQRRKNNQHDVAIVRIEQ K V Y Q R R 0 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 2 1 0 0 9 0 1 0 1197.603 P0AFG3 P0AFG3 824 832 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 1.1053E-06 127.56 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 276230000 80863000 74297000 0 0 58219000 62855000 0 0 4947 246 5431 29583;29584;29585;29586 22347;22348;22349;22350;22351 22351 5 80863000 76050000 0 0 70230000 69629000 0 0 VYYHHTGHIGGIK NADKVAVTGNKRTDKVYYHHTGHIGGIKQA DKVYYHHTGHIGGIKQATFEEMIARRPERV K V Y I K Q 0 0 0 0 0 0 0 3 3 2 0 1 0 0 0 0 1 0 2 1 0 0 13 0 0 0 1480.7575 P0AA10 P0AA10 73 85 rplM 50S ribosomal protein L13 yes yes 2;3;4 1.7498E-28 121.04 By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 3 1 3 3 1343700000 222230000 469470000 0 683100 244210000 407070000 0 0 4948 182 5432 29587;29588;29589;29590;29591;29592;29593;29594;29595;29596;29597;29598;29599 22352;22353;22354;22355;22356;22357;22358;22359;22360;22361;22362;22363;22364;22365;22366 22354 15 222230000 480550000 0 5179000 294600000 450940000 0 0 WANDPFPIVALDR IVSTSLPPEHPFYQRWANDPFPIVALDRAL QRWANDPFPIVALDRALDREHFTSVVGADQ R W A D R A 2 1 1 2 0 0 0 0 0 1 1 0 0 1 2 0 0 1 0 1 0 0 13 0 0 4 1512.7725 P0ACP1 P0ACP1 137 149 cra Catabolite repressor/activator yes yes 2 0.0028562 50.292 By matching By matching By matching By MS/MS 1 1 1 1 80671000 22941000 27539000 0 0 12891000 17300000 0 0 4949 217 5433 29600;29601;29602;29603 22367 22367 0 22941000 28189000 0 0 15551000 19165000 0 0 WATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELK EEHPLHGGTGIAHTRWATHGEPSEVNAHPH NGIIENHEPLREELKARGYTFVSETDTEVI R W A L K A 2 1 3 0 0 0 7 2 6 3 2 1 0 0 3 2 1 1 0 5 0 0 39 1 7 5 4439.2159 P17169 P17169 75 113 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 4 0.00067986 28.869 By MS/MS By MS/MS 1 1 102160000 0 0 0 0 50197000 51958000 0 0 4950 288 5434 29604;29605 22368 22368 1 0 0 0 0 60553000 57558000 0 0 WDWQPEPVNEALNAR IQNINELVKEAGKPRWDWQPEPVNEALNAR WDWQPEPVNEALNARVAALAEARLSDAYRI R W D A R V 2 1 2 1 0 1 2 0 0 0 1 0 0 0 2 0 0 2 0 1 0 0 15 0 2 4 1823.8591 P05055 P05055 231 245 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 5.5099E-07 91.937 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32748000 10076000 6386200 0 0 8232600 8053400 0 0 4951 48 5435 29606;29607;29608;29609 22369;22370;22371;22372 22372 4 10076000 6537000 0 0 9931000 8921400 0 0 WELLQQVDTSTR KVRFLEQQNQVLQTKWELLQQVDTSTRTHN QTKWELLQQVDTSTRTHNLEPYFESFINNL K W E T R T 0 1 0 1 0 2 1 0 0 0 2 0 0 0 0 1 2 1 0 1 0 0 12 0 1 0 1474.7416 CON__P04264 CON__P04264 212 223 yes yes 2 1.3394E-56 164.64 By MS/MS By MS/MS By matching By matching 1 1 1 1 664060000 155180000 119240000 0 0 5625400 384020000 0 0 + 4952 9 5436 29610;29611;29612;29613 22373;22374 22373 2 155180000 122060000 0 0 6785900 425400000 0 0 WEYNVQEGKEDDVGNIVHK NKRDPNQGTCTNACRWEYNVQEGKEDDVGN VQEGKEDDVGNIVHKYEPIPVQNVEPTLGI R W E H K Y 0 0 2 2 0 1 3 2 1 1 0 2 0 0 0 0 0 1 1 3 0 0 19 1 3 0 2258.0604 P76403 P76403 199 217 yegQ Uncharacterized protease YegQ yes yes 4 0.00049495 47.478 By MS/MS By MS/MS By MS/MS 1 1 1 49429000 19669000 18124000 0 0 11635000 0 0 0 4953 424 5437 29614;29615;29616 22375;22376;22377 22375 0 19669000 18552000 0 0 14036000 0 0 0 WIADVGFGGQTLTAPIR PRTHRLLLVELEEEKWIADVGFGGQTLTAP ADVGFGGQTLTAPIRLVSDLVQTTPHGEYR K W I I R L 2 1 0 1 0 1 0 3 0 2 1 0 0 1 1 0 2 1 0 1 0 0 17 0 0 3 1800.9523 P77567 P77567 119 135 nhoA N-hydroxyarylamine O-acetyltransferase yes yes 2 7.1442E-16 94.191 By matching By matching By MS/MS By MS/MS 1 1 1 1 28950000 5059400 5471900 0 0 8018000 10400000 0 0 4954 436 5438 29617;29618;29619;29620 22378;22379 22379 2 5059400 5601100 0 0 9672200 11521000 0 0 WIVEAAR PVEVRPVRRNALAMRWIVEAARKRGDKSMA RRNALAMRWIVEAARKRGDKSMALRLANEL R W I A R K 2 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 7 0 1 2 843.46029 P02359 P02359 103 109 rpsG 30S ribosomal protein S7 yes yes 2 0.0045261 70.912 By MS/MS By MS/MS 1 1 8663600 0 0 0 0 8663600 0 0 0 4955 36 5439 29621;29622 22380;22381 22381 2 0 0 0 0 10451000 0 0 0 WIYSVSK EDHSNLIVGPVNKPRWIYSVSKQLLDRVIW VGPVNKPRWIYSVSKQLLDRVIWAYGEKEG R W I S K Q 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 1 1 1 0 0 7 0 0 0 881.4647 P77398 P77398 461 467 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 1;2 0.0027265 84.699 By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 5222500000 1189900000 1558500000 0 0 1013800000 1460300000 0 0 4956 432 5440 29623;29624;29625;29626;29627;29628;29629;29630 22382;22383;22384;22385 22383 4 1189900000 1595300000 0 0 1222900000 1617700000 0 0 WKDEYLDQGNQTQP EEKAGLRYSANNYVKWKDEYLDQGNQTQP_ KWKDEYLDQGNQTQP_______________ K W K Q P - 0 0 1 2 0 3 1 1 0 0 1 1 0 0 1 0 1 1 1 0 0 0 14 1 1 0 1720.7693 P0A9W9 P0A9W9 171 184 yrdA Protein YrdA yes yes 2 6.2881E-76 172.61 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 228620000 58246000 61278000 1459600 0 49474000 58165000 0 0 4957 179 5441 29631;29632;29633;29634;29635 22386;22387;22388;22389 22387 4 58246000 62725000 12402000 0 59680000 64434000 0 0 WLEENQLEDGHECLLR LCARFSLKDTPAALRWLEENQLEDGHECLL LEENQLEDGHECLLRRVISSDGRSRGFING R W L L R R 0 1 1 1 1 1 4 1 1 0 4 0 0 0 0 0 0 1 0 0 0 0 16 0 4 0 2039.9371 P05824 P05824 79 94 recN DNA repair protein RecN yes yes 3 3.4082E-05 67.136 By MS/MS By MS/MS By matching By matching 1 1 1 1 27625000 9538700 9012800 0 0 4011700 5061500 0 0 4958 49 5442 29636;29637;29638;29639 22390;22391 22391 2 9538700 9225500 0 0 4839300 5607000 0 0 WLFELNAK EDTTQDDDMKQSIVKWLFELNAKQREVLAR MKQSIVKWLFELNAKQREVLARRFGLLGYE K W L A K Q 1 0 1 0 0 0 1 0 0 0 2 1 0 1 0 0 0 1 0 0 0 0 8 0 1 1 1019.544 P13445 P13445 262 269 rpoS RNA polymerase sigma factor RpoS yes yes 2 0.0051367 44.447 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 4959 279 5443 29640;29641;29642 22392;22393;22394 22394 3 0 0 0 0 0 0 0 0 WLGGMLTNWK KDAALSCDQFFVNHRWLGGMLTNWKTVRQS FVNHRWLGGMLTNWKTVRQSIKRLKDLETQ R W L W K T 0 0 1 0 0 0 0 2 0 0 2 1 1 0 0 0 1 2 0 0 0 0 10 0 0 0 1204.6063 P0A7V0 P0A7V0 96 105 rpsB 30S ribosomal protein S2 yes yes 2 1.8325E-10 121.05 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 134550000 43887000 47930000 0 0 23312000 19418000 0 0 4960 128 5444 29643;29644;29645;29646 22395;22396;22397;22398 22398 4 43887000 49062000 0 0 28121000 21511000 0 0 WLHSLHSTLLSR PAYYDSKTVMLESWRWLHSLHSTLLSREVD SWRWLHSLHSTLLSREVDWTQLDHVIDAVV R W L S R E 0 1 0 0 0 0 0 0 2 0 4 0 0 0 0 3 1 1 0 0 0 0 12 0 0 0 1448.7888 P33602 P33602 651 662 nuoG NADH-quinone oxidoreductase subunit G yes yes 3;4 1.6038E-08 89.959 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 378670000 84282000 142960000 0 0 64015000 87416000 0 0 4961 345 5445 29647;29648;29649;29650;29651;29652;29653;29654 22399;22400;22401;22402;22403;22404;22405;22406 22399 8 84282000 146330000 0 0 77222000 96837000 0 0 WLVTEGLK VETRPIVASQAIGDKWLVTEGLKAGDRVVI SQAIGDKWLVTEGLKAGDRVVISGLQKVRP K W L L K A 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 1 1 0 1 0 0 8 0 1 0 944.53312 P0AE06 P0AE06 347 354 acrA Multidrug efflux pump subunit AcrA yes yes 2 0.0045871 62.659 By MS/MS By matching By MS/MS 1 2 2 22347000 4487500 6859400 0 0 0 11000000 0 0 4962 232 5446 29655;29656;29657;29658;29659 22407;22408 22408 2 4487500 7021300 0 0 0 12186000 0 0 WNMLHPLETPR TSFTELARDGQDCERWNMLHPLETPRVPYI DCERWNMLHPLETPRVPYIAQVMNDAPAVA R W N P R V 0 1 1 0 0 0 1 0 1 0 2 0 1 0 2 0 1 1 0 0 0 0 11 0 1 2 1392.6972 P0AFG8 P0AFG8 775 785 aceE Pyruvate dehydrogenase E1 component yes yes 3 0.015816 36.982 By matching By MS/MS 1 1 6419500 0 0 0 0 2552700 3866800 0 0 4963 248 5447 29660;29661 22409 22409 0 0 0 0 0 3079300 4283500 0 0 WPGTESAFQVHR RFGFELAAHHDLRCRWPGTESAFQVHRLAD RCRWPGTESAFQVHRLADDALNGVTGLVEY R W P H R L 1 1 0 0 0 1 1 1 1 0 0 0 0 1 1 1 1 1 0 1 0 0 12 0 1 2 1413.6789 P63417 P63417 134 145 yhbS Uncharacterized N-acetyltransferase YhbS yes yes 2;3 2.7489E-07 66.538 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 156530000 63852000 34037000 0 0 23167000 35475000 0 0 4964 394 5448 29662;29663;29664;29665;29666;29667;29668 22410;22411;22412;22413;22414;22415 22415 5 63852000 34840000 0 0 27947000 39299000 0 0 WQILLQHPSR GPVPALAPKRGGRWRWQILLQHPSRVRLQH GGRWRWQILLQHPSRVRLQHIINGTLALIN R W Q S R V 0 1 0 0 0 2 0 0 1 1 2 0 0 0 1 1 0 1 0 0 0 0 10 0 0 1 1276.704 P17888 P17888 689 698 priA Primosomal protein N yes yes 3 0.003243 40.727 By matching By matching By MS/MS By MS/MS 1 1 1 2 37490000 7371200 8794300 0 0 7014200 14310000 0 0 4965 290 5449 29669;29670;29671;29672;29673 22416;22417 22417 2 7371200 9001900 0 0 8461300 15852000 0 0 WRADPWAR GSSAVPQPKETVVSRWRADPWARGSYSYVA KETVVSRWRADPWARGSYSYVAAGSSGNDY R W R A R G 2 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 8 1 0 3 1056.5253 LSD1-FL-His LSD1-FL-His 753 760 yes yes 2;3 3.1916E-17 139.88 By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 1366700000 561020000 442530000 0 0 166770000 196400000 0 0 4966 24 5450 29674;29675;29676;29677;29678;29679;29680;29681;29682;29683 22418;22419;22420;22421;22422;22423;22424;22425;22426;22427 22425 10 596630000 452970000 0 0 214320000 217570000 0 0 WRGVRPTVR AEHMLRVLGKAGAARWRGVRPTVRGTAMNP KAGAARWRGVRPTVRGTAMNPVDHPHGGGE R W R V R G 0 3 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 2 0 0 9 2 0 1 1125.6519 P60422 P60422 213 221 rplB 50S ribosomal protein L2 yes yes 3 0.0049892 44.203 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 26270000 6762100 15924000 0 0 1983500 1600500 0 0 4967 379 5451 29684;29685;29686;29687 22428 22428 1 6762100 16300000 0 0 2392700 1773000 0 0 WSGEMSEIASGVLR ETQRFYHHLDAHWRRWSGEMSEIASGVLRQ RWSGEMSEIASGVLRQQLDLIATRTGENKW R W S L R Q 1 1 0 0 0 0 2 2 0 1 1 0 1 0 0 3 0 1 0 1 0 0 14 0 2 1 1520.7293 P15038 P15038 91 104 helD Helicase IV yes yes 2 4.6477E-09 83.397 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 27739000 5971500 8257100 0 0 6449000 7061100 0 0 4968 281 5452 29688;29689;29690;29691;29692 22429;22430;22431;22432 22432 4 5971500 8452000 0 0 7779400 7822100 0 0 WSGSASRNHR SQDSDSEGHSEDSERWSGSASRNHRGSAQE EDSERWSGSASRNHRGSAQEQSRHGSRHPR R W S H R G 1 2 1 0 0 0 0 1 1 0 0 0 0 0 0 3 0 1 0 0 0 0 10 1 0 1 1156.5486 CON__P20930 CON__P20930 962 971 yes no 2 0.014699 32.841 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 0 0 0 0 0 + 4969 14 5453 29693;29694;29695 22433;22434 22433 0 0 0 0 0 0 0 0 0 WTDDDLYGIIR MRGDLAKREPGMLARWTDDDLYGIIRAAKK MLARWTDDDLYGIIRAAKKGKKTFILHDGP R W T I R A 0 1 0 3 0 0 0 1 0 2 1 0 0 0 0 0 1 1 1 0 0 0 11 0 0 0 1365.6565 P00956 P00956 32 42 ileS Isoleucine--tRNA ligase yes yes 2 0.0033933 66.435 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 9910400 2432600 3221400 0 0 1617500 2639000 0 0 4970 32 5454 29696;29697;29698;29699 22435;22436 22435 2 2432600 3297400 0 0 1951200 2923400 0 0 WTLLQEQGTK KVRFLEQQNKVLDTKWTLLQEQGTKTVRQN VLDTKWTLLQEQGTKTVRQNLEPLFEQYIN K W T T K T 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 2 1 0 0 0 0 10 0 1 0 1202.6295 CON__P48668;CON__P04259;CON__P02538;CON__P13647 CON__P13647 200 209 no no 2 2.0993E-20 135.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 129560000 19585000 15107000 0 6708900 28457000 38596000 9251200 11860000 + 4971 13;5 5455 29700;29701;29702;29703;29704;29705;29706 22437;22438;22439;22440 22439 4 19585000 15463000 0 50864000 34328000 42756000 71199000 68065000 WVAMGEEYK EKIELLPYHELGKHKWVAMGEEYKLDGVKP ELGKHKWVAMGEEYKLDGVKPPKKETMERV K W V Y K L 1 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 1 1 1 0 0 9 0 2 1 1111.5008 P0A9N4 P0A9N4 210 218 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2 0.00092927 91.318 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36971000 11300000 9382500 0 0 8111300 8176500 0 0 4972 171 5456 29707;29708;29709;29710 22441;22442;22443;22444 22442 4 11300000 9604000 0 0 9784700 9057700 0 0 WVAMGEEYKLDGVKPPK EKIELLPYHELGKHKWVAMGEEYKLDGVKP AMGEEYKLDGVKPPKKETMERVKGILEQYG K W V P K K 1 0 0 1 0 0 2 2 0 0 1 3 1 0 2 0 0 1 1 2 0 0 17 2 2 3 1945.9972 P0A9N4 P0A9N4 210 226 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3;4 0.00024219 58.159 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 53946000 27107000 11166000 0 0 7062900 8610400 0 0 4973 171 5457 29711;29712;29713;29714;29715 22445;22446;22447;22448;22449 22445 5 27107000 11430000 0 0 8520000 9538400 0 0 WVLAVAGTHGK MSGPQWLHDFVLRDRWVLAVAGTHGKTTTA LRDRWVLAVAGTHGKTTTAGMATWILEQCG R W V G K T 2 0 0 0 0 0 0 2 1 0 1 1 0 0 0 0 1 1 0 2 0 0 11 0 0 2 1137.6295 P37773 P37773 104 114 mpl UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase yes yes 2;3 1.9364E-05 101.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 106780000 16208000 36373000 0 0 22859000 31337000 0 0 4974 360 5458 29716;29717;29718;29719;29720;29721;29722 22450;22451;22452;22453;22454;22455 22450 6 16208000 37232000 0 0 27575000 34714000 0 0 WVNALVSELNDKEQHGSQWK TLTEADLSDEQTVTRWVNALVSELNDKEQH VSELNDKEQHGSQWKFDVHTNAEQNLFEPI R W V W K F 1 0 2 1 0 2 2 1 1 0 2 2 0 0 0 2 0 2 0 2 0 0 20 1 2 1 2367.1608 P0AES6 P0AES6 629 648 gyrB DNA gyrase subunit B yes yes 3 8.5114E-09 77.514 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50395000 14554000 8772700 0 0 10720000 16348000 0 0 4975 239 5459 29723;29724;29725;29726 22456;22457;22458 22458 3 14554000 8979700 0 0 12932000 18110000 0 0 WYEGRPVMIAR FMQQKRKIHRHPHSRWYEGRPVMIARNDSA PHSRWYEGRPVMIARNDSALGLFNGDIGIA R W Y A R N 1 2 0 0 0 0 1 1 0 1 0 0 1 0 1 0 0 1 1 1 0 0 11 1 1 2 1376.7023 P04993 P04993 476 486 recD RecBCD enzyme subunit RecD yes yes 3 0.0072493 39.918 By matching By MS/MS By MS/MS 1 1 1 24084000 10550000 0 0 0 5031600 8502900 0 0 4976 46 5460 29727;29728;29729 22459 22459 1 10550000 0 0 0 6069700 9419300 0 0 YAAGELKHGP GALKLKEISYIHAEAYAAGELKHGPLALID IHAEAYAAGELKHGPLALIDADMPVIVVAP A Y A G P L 2 0 0 0 0 0 1 2 1 0 1 1 0 0 1 0 0 0 1 0 0 0 10 1 1 2 1041.5243 P17169 P17169 498 507 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 1.4288E-07 118.32 By MS/MS By MS/MS By MS/MS 1 1 1 242470000 47799000 48061000 0 0 0 146610000 0 0 4977 288 5461 29730;29731;29732 22460;22461;22462;22463 22461 4 288540000 287650000 0 0 0 208990000 0 0 YAAIFVPGGHGALIGLPE KKLADVVASLNADSEYAAIFVPGGHGALIG IFVPGGHGALIGLPESQDVAAALQWAIKND E Y A P E S 3 0 0 0 0 0 1 4 1 2 2 0 0 1 2 0 0 0 1 1 0 0 18 0 0 5 1780.9512 P31658 P31658 146 163 hchA Molecular chaperone Hsp31 and glyoxalase 3 yes yes 2 3.0463E-06 62.303 By MS/MS By MS/MS 1 1 26081000 0 0 0 0 0 22536000 0 3544900 4978 335 5462 29733;29734 22464 22464 1 0 0 0 0 0 341560000 0 20343000 YADEVVR RAYRRPEPYKGKGVRYADEVVRTKEAKKK_ PYKGKGVRYADEVVRTKEAKKK________ R Y A V R T 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 7 0 1 1 850.41848 P0AG55 P0AG55 164 170 rplF 50S ribosomal protein L6 yes yes 2 0.0028379 76.847 By matching By MS/MS 1 1 5893800 1076200 0 0 0 4817700 0 0 0 4979 259 5463 29735;29736 22465 22465 1 1076200 0 0 0 5811600 0 0 0 YADIATKCVTNFRE FPYENMEGKIDRPEEYADIATKCVTNFREK EYADIATKCVTNFREKNRDRCLVILSRNDE E Y A R E K 2 1 1 1 1 0 1 0 0 1 0 1 0 1 0 0 2 0 1 1 0 0 14 2 0 2 1686.8036 P0A8E1 P0A8E1 108 121 ycfP UPF0227 protein YcfP yes yes 3 0.0002795 64.104 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 1 1 49546000 3695500 5378700 8182200 14485000 1972300 2379000 4239000 9214500 4980 143 5464 29737;29738;29739;29740;29741;29742;29743;29744;29745 22466;22467;22468 22468 3 56780000 82027000 69523000 109820000 30365000 36058000 32624000 52880000 YADVGSFDYGR AQTGNKTRLAFAGLKYADVGSFDYGRNYGV AGLKYADVGSFDYGRNYGVVYDALGYTDML K Y A G R N 1 1 0 2 0 0 0 2 0 0 0 0 0 1 0 1 0 0 2 1 0 0 11 0 0 1 1248.5411 P02931 P02931 112 122 ompF Outer membrane protein F yes yes 2 9.5179E-08 113.22 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 66263000 12575000 12466000 0 0 17966000 23256000 0 0 4981 38 5465 29746;29747;29748;29749 22469;22470;22471;22472 22471 4 12575000 12760000 0 0 21673000 25763000 0 0 YAEGYPGK SPRVMQAQGSQLTNKYAEGYPGKRYYGGCE GSQLTNKYAEGYPGKRYYGGCEYVDIVEQL K Y A G K R 1 0 0 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 2 0 0 0 8 0 1 2 883.40758 P0A825 P0A825 55 62 glyA Serine hydroxymethyltransferase yes yes 2 0.021929 55.504 By MS/MS By MS/MS 1 1 2960600 0 1768100 0 0 0 1192500 0 0 4982 136 5466 29750;29751 22473 22473 0 0 1809800 0 0 0 1321100 0 0 YAEGYPGKR SPRVMQAQGSQLTNKYAEGYPGKRYYGGCE SQLTNKYAEGYPGKRYYGGCEYVDIVEQLA K Y A K R Y 1 1 0 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 2 0 0 0 9 1 1 2 1039.5087 P0A825 P0A825 55 63 glyA Serine hydroxymethyltransferase yes yes 2 0.011912 50.127 By MS/MS By MS/MS By matching By matching 1 1 1 1 4411200 1562000 2005600 0 0 365890 477740 0 0 4983 136 5467 29752;29753;29754;29755 22474 22474 1 1562000 2052900 0 0 441370 529230 0 0 YAFAYGADAVYAGQPR KPELLSPAGTLKNMRYAFAYGADAVYAGQP AFAYGADAVYAGQPRYSLRVRNNEFNHENL R Y A P R Y 5 1 0 1 0 1 0 2 0 0 0 0 0 1 1 0 0 0 3 1 0 0 16 0 0 6 1718.8053 P76403 P76403 18 33 yegQ Uncharacterized protease YegQ yes yes 2 4.7935E-29 133.07 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 40306000 7238300 10672000 0 0 15350000 7045900 0 0 4984 424 5468 29756;29757;29758;29759 22475;22476;22477 22477 3 7238300 10924000 0 0 18517000 7805200 0 0 YAGEPTR IYQFASIGEVNQDLKYAGEPTRVEIGDRNR GEVNQDLKYAGEPTRVEIGDRNRIRESVTI K Y A T R V 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 7 0 1 2 792.37662 P0A722 P0A722 77 83 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase yes yes 2 0.012914 52.683 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 9168700 2325200 3437600 0 0 1842200 1563700 0 0 4985 92 5469 29760;29761;29762;29763;29764 22478;22479 22479 2 2325200 3518700 0 0 2222200 1803300 0 0 YAGRPASASPAVGYMSVHQK QHHFREVIPFGASLRYAGRPASASPAVGYM ASASPAVGYMSVHQKQQQDLVNDALNVE__ R Y A Q K Q 4 1 0 0 0 1 0 2 1 0 0 1 1 0 2 3 0 0 2 2 0 0 20 1 0 6 2076.0211 P0AFG3 P0AFG3 901 920 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 3;4 3.0205E-26 107.41 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 381090000 126730000 88329000 0 0 79141000 86893000 0 0 4986 246 5470 29765;29766;29767;29768;29769;29770;29771;29772 22480;22481;22482;22483;22484;22485;22486;22487 22485 8 126730000 90414000 0 0 95467000 96258000 0 0 YAGVGDIIK RRVMCIKVLGGSHRRYAGVGDIIKITIKEA GGSHRRYAGVGDIIKITIKEAIPRGKVKKG R Y A I K I 1 0 0 1 0 0 0 2 0 2 0 1 0 0 0 0 0 0 1 1 0 0 9 0 0 1 934.51238 P0ADY3 P0ADY3 32 40 rplN 50S ribosomal protein L14 yes yes 1;2 1.3904E-17 106.36 By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 2 2897800000 775400000 635760000 1562900 0 533120000 952000000 0 0 4987 228 5471 29773;29774;29775;29776;29777;29778;29779;29780;29781 22488;22489;22490;22491;22492 22491 4 775400000 650760000 13280000 0 643110000 1054600000 0 0 YAIALNLER ADCMQGEMISLPGNRYAIALNLERDSVGAV SLPGNRYAIALNLERDSVGAVVMGPYADLA R Y A E R D 2 1 1 0 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 9 0 1 2 1061.5869 P0ABB0 P0ABB0 60 68 atpA ATP synthase subunit alpha yes yes 2 0.0020909 75.213 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 33331000 4838500 6061800 0 0 11170000 11261000 0 0 4988 193 5472 29782;29783;29784;29785;29786;29787;29788 22493;22494;22495;22496 22495 4 4838500 6204900 0 0 13474000 12474000 0 0 YALDHFQTK GEDPFAQHRPLDDKRYALDHFQTKLLKLPQ PLDDKRYALDHFQTKLLKLPQTMQTARGKQ R Y A T K L 1 0 0 1 0 1 0 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 9 0 0 1 1121.5506 P46144 P46144 169 177 yedJ Uncharacterized protein YedJ yes yes 3 0.00074709 57.267 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 77820000 18740000 27413000 0 0 14665000 17002000 0 0 4989 371 5473 29789;29790;29791;29792 22497;22498;22499;22500 22497 4 18740000 28060000 0 0 17690000 18835000 0 0 YAMIGDPTGALTR HKAWHSSSETIAKIKYAMIGDPTGALTRNF IKYAMIGDPTGALTRNFDNMREDEGLADRA K Y A T R N 2 1 0 1 0 0 0 2 0 1 1 0 1 0 1 0 2 0 1 0 0 0 13 0 0 3 1364.6758 P0AE08 P0AE08 94 106 ahpC Alkyl hydroperoxide reductase subunit C yes yes 2 1.3959E-14 81.338 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 19615000 6121200 6672700 0 0 0 6821300 0 0 4990 233 5474 29793;29794;29795;29796 22501;22502;22503;22504 22503 4 6121200 6830200 0 0 0 7556500 0 0 YANADVER PPGTGKTTLAEVIARYANADVERISAVTSG LAEVIARYANADVERISAVTSGVKEIREAI R Y A E R I 2 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 8 0 1 2 936.43011 P0AAZ4 P0AAZ4 73 80 rarA Replication-associated recombination protein A yes yes 2 1.2626E-07 122.13 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 18880000 0 8545700 0 0 4869200 4033500 0 1431200 4991 189 5475 29797;29798;29799;29800 22505;22506;22507 22505 3 0 8747400 0 0 5873800 4468300 0 8213500 YAQVDVIK ARLSDAYRITDKQERYAQVDVIKSETIATL ITDKQERYAQVDVIKSETIATLLAEDETLD R Y A I K S 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 2 0 0 8 0 0 1 934.51238 P05055 P05055 267 274 pnp Polyribonucleotide nucleotidyltransferase yes yes 2 0.00067824 100.45 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 60164000 11724000 14033000 0 0 14207000 20200000 0 0 4992 48 5476 29801;29802;29803;29804 22508;22509;22510 22508 3 11724000 14365000 0 0 17138000 22377000 0 0 YCPNATVLHIDIDPTSISK VGVRFDDRTTNNLAKYCPNATVLHIDIDPT ATVLHIDIDPTSISKTVTADIPIVGDARQV K Y C S K T 1 0 1 2 1 0 0 0 1 3 1 1 0 0 2 2 2 0 1 1 0 0 19 0 0 3 2143.062 P00893 P00893 294 312 ilvI Acetolactate synthase isozyme 3 large subunit yes yes 3 1.6496E-05 62.765 By MS/MS By MS/MS By MS/MS 1 1 1 31352000 11829000 8825800 0 0 10697000 0 0 0 4993 29 5477 29805;29806;29807 22511;22512;22513;22514 22514 4 11829000 9034100 0 0 12904000 0 0 0 YDANNIYLAANYGETR LGNGKKAEQWATGLKYDANNIYLAANYGET DANNIYLAANYGETRNATPITNKFTNTSGF K Y D T R N 3 1 3 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 3 0 0 0 16 0 1 3 1846.8486 P02931 P02931 242 257 ompF Outer membrane protein F yes yes 2 6.0474E-29 132.47 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 36497000 3601300 5148500 0 0 10524000 17223000 0 0 4994 38 5478 29808;29809;29810;29811 22515;22516;22517;22518 22517 4 3601300 5270000 0 0 12696000 19079000 0 0 YDAVLVAIGR YVTMEGKKAPAEPQRYDAVLVAIGRVPNGK AEPQRYDAVLVAIGRVPNGKNLDAGKAGVE R Y D G R V 2 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 1 2 0 0 10 0 0 2 1075.6026 P0A9P0 P0A9P0 264 273 lpdA Dihydrolipoyl dehydrogenase yes yes 2 0.00022361 93.162 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39671000 9558000 9258100 0 0 9779900 11075000 0 0 4995 172 5479 29812;29813;29814;29815 22519;22520;22521;22522 22519 4 9558000 9476600 0 0 11798000 12269000 0 0 YDDLPLLPPPGTVAR IVIDPKELLEANWYRYDDLPLLPPPGTVAR YDDLPLLPPPGTVARRLIEDTVAMCRAEYE R Y D A R R 1 1 0 2 0 0 0 1 0 0 3 0 0 0 4 0 1 0 1 1 0 0 15 0 0 5 1622.8668 P32664 P32664 228 242 nudC NADH pyrophosphatase yes yes 2 5.8538E-18 119.03 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 135010000 36684000 29052000 0 0 33622000 35654000 0 0 4996 340 5480 29816;29817;29818;29819 22523;22524;22525 22525 3 36684000 29738000 0 0 40558000 39497000 0 0 YDEAPSNVAQAVIEAR SLTKGRASYTMEFLKYDEAPSNVAQAVIEA DEAPSNVAQAVIEARGK_____________ K Y D A R G 4 1 1 1 0 1 2 0 0 1 0 0 0 0 1 1 0 0 1 2 0 0 16 0 2 5 1731.8428 P0A6M8 P0A6M8 687 702 fusA Elongation factor G yes yes 2 2.4919E-19 113.24 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 39526000 9931000 6737800 0 0 9756800 13100000 0 0 4997 76 5481 29820;29821;29822;29823 22526;22527;22528;22529 22527 4 9931000 6896800 0 0 11770000 14512000 0 0 YDFIGSR TCPECLKGFYSQCAKYDFIGSRRDGGFAEY GFYSQCAKYDFIGSRRDGGFAEYIVVKRKN K Y D S R R 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 7 0 0 0 856.40792 P0A9S3 P0A9S3 106 112 gatD Galactitol-1-phosphate 5-dehydrogenase yes yes 2 0.007645 58.981 By MS/MS By MS/MS By matching 1 1 1 8521400 2403600 2897900 0 0 0 3219900 0 0 4998 175 5482 29824;29825;29826 22530 22530 1 2403600 2966300 0 0 0 3567000 0 0 YDIAVEDPR DLKGIKKILIASGVRYDIAVEDPRYIKELA IASGVRYDIAVEDPRYIKELATHHVGGYLK R Y D P R Y 1 1 0 2 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 9 0 1 2 1076.5138 Q46861 Q46861 498 506 ygiQ UPF0313 protein YgiQ yes yes 2 0.00038935 97.431 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33030000 9132300 8409400 0 0 6192200 9296300 0 0 4999 441 5483 29827;29828;29829;29830 22531;22532;22533;22534 22531 4 9132300 8607900 0 0 7469700 10298000 0 0 YDNHLLEDYTEEEFK PALYDHVVKMVEMGKYDNHLLEDYTEEEFK YDNHLLEDYTEEEFKQMDTFIDHDRDMTFS K Y D F K Q 0 0 1 2 0 0 4 0 1 0 2 1 0 1 0 0 1 0 2 0 0 0 15 0 4 0 1943.8425 P00452;P00452-2 P00452 115 129 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 3 0.0059543 42.314 By MS/MS By MS/MS By matching By matching 1 1 1 1 16127000 4232700 4028500 0 0 3890900 3975000 0 0 5000 26 5484 29831;29832;29833;29834 22535;22536 22535 0 4232700 4123500 0 0 4693600 4403500 0 0 YDPNRSANIALVLYKDGE KRNKDGIPAVVERLEYDPNRSANIALVLYK NRSANIALVLYKDGERRYILAPKGLKAGDQ E Y D G E R 2 1 2 2 0 0 1 1 0 1 2 1 0 0 1 1 0 0 2 1 0 0 18 2 0 3 2037.0167 P60422 P60422 83 100 rplB 50S ribosomal protein L2 yes yes 3 0.0038579 32.926 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10717000 346360 0 1167200 1472000 2338400 0 0 5393300 5001 379 5485 29835;29836;29837;29838;29839;29840 22537;22538 22538 2 5321700 0 9917700 11160000 36002000 0 0 30951000 YDVDVIDSQSASKLIPAAVE EGQKLAGALKVHVDEYDVDVIDSQSASKLI IDSQSASKLIPAAVEGGLHQIETASGAVLK E Y D V E G 3 0 0 3 0 1 1 0 0 2 1 1 0 0 1 3 0 0 1 3 0 0 20 1 0 4 2119.0685 P35340 P35340 280 299 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 2.309E-103 180.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 114820000 0 8807100 4851000 1562900 37318000 44096000 8213400 9972400 5002 348 5486 29841;29842;29843;29844;29845;29846;29847 22539;22540;22541;22542;22543;22544;22545 22542 7 0 134310000 41218000 11849000 574550000 668330000 63212000 57230000 YEDEINK ELKNMQDMVEDYRNKYEDEINKRTNAENEF MVEDYRNKYEDEINKRTNAENEFVTIKKDV K Y E N K R 0 0 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 7 0 2 0 909.40798 CON__P04264;CON__H-INV:HIT000016045;CON__P35908v2;CON__P35908;CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__Q8VED5;CON__P13647;CON__Q7Z794 CON__P04264 270 276 no no 2 0.002636 78.616 By matching By MS/MS By MS/MS 1 1 1 7599900 1107100 0 0 0 3220500 3272300 0 0 + 5003 9;16;13;5;21 5487 29848;29849;29850 22546;22547 22547 2 1107100 0 0 0 3884900 3624900 0 0 YEDEINKR ELKNMQDMVEDYRNKYEDEINKRTNAENEF VEDYRNKYEDEINKRTNAENEFVTIKKDVD K Y E K R T 0 1 1 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 8 1 2 0 1065.5091 CON__P04264;CON__H-INV:HIT000016045;CON__P35908v2;CON__P35908;CON__P48668;CON__P04259;CON__P02538;CON__O95678;CON__Q8VED5;CON__P13647;CON__Q7Z794 CON__P04264 270 277 no no 2;3 2E-34 170.06 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 232490000 53167000 34160000 0 0 77681000 67481000 0 0 + 5004 9;16;13;5;21 5488 29851;29852;29853;29854;29855;29856;29857;29858 22548;22549;22550;22551;22552;22553;22554;22555;22556 22553 8 53167000 34966000 0 0 93707000 74754000 0 0 YEEHLYER LVQPTRLLLEYLEEKYEEHLYERDEGDKWR LEYLEEKYEEHLYERDEGDKWRNKKFELGL K Y E E R D 0 1 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 2 0 0 0 8 0 3 0 1137.5091 GST-Nek6 GST-Nek6 28 35 yes yes 2;3 5.5725E-35 160.63 By MS/MS By MS/MS 2 2 450930000 0 0 0 0 219030000 231900000 0 0 5005 23 5489 29859;29860;29861;29862 22557;22558;22559;22560 22558 4 0 0 0 0 264210000 256900000 0 0 YEEHLYERDEGDKWR LVQPTRLLLEYLEEKYEEHLYERDEGDKWR YEEHLYERDEGDKWRNKKFELGLEFPNLPY K Y E W R N 0 2 0 2 0 0 4 1 1 0 1 1 0 0 0 0 0 1 2 0 0 0 15 2 4 0 2023.9024 GST-Nek6 GST-Nek6 28 42 yes yes 3;4 1.6702E-31 136.33 By MS/MS By MS/MS 2 2 97233000 0 0 0 0 42286000 54948000 0 0 5006 23 5490 29863;29864;29865;29866 22561;22562;22563;22564 22563 4 0 0 0 0 51009000 60870000 0 0 YEELQITAGR AQKSKAEAESLYQSKYEELQITAGRHGDSV LYQSKYEELQITAGRHGDSVRNSKIEISEL K Y E G R H 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 2 1 1178.5932 CON__P04264 CON__P04264 377 386 yes yes 2 2.3333E-76 186.25 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1077600000 161250000 159900000 0 0 324410000 431990000 0 0 + 5007 9 5491 29867;29868;29869;29870;29871 22565;22566;22567;22568 22565 4 161250000 163680000 0 0 391550000 478550000 0 0 YEELQQTAGR ANRSRTEAESWYQTKYEELQQTAGRHGDDL WYQTKYEELQQTAGRHGDDLRNTKHEISEM K Y E G R H 1 1 0 0 0 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 2 1 1193.5677 CON__P13647 CON__P13647 365 374 no no 2 1.6819E-61 198.65 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 80967000 11940000 14653000 0 0 28010000 26364000 0 0 + 5008 13 5492 29872;29873;29874;29875 22569;22570;22571;22572 22572 4 11940000 14999000 0 0 33788000 29206000 0 0 YEELQVTAGR AQRSRAEAESWYQTKYEELQVTAGRHGDDL WYQTKYEELQVTAGRHGDDLRNTKQEIAEI K Y E G R H 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 10 0 2 1 1164.5775 CON__P48668;CON__P04259;CON__P02538;CON__O95678 CON__P48668 360 369 no no 2 0.0026595 46.819 By MS/MS 1 0 0 0 0 0 0 0 0 0 + 5009 5 5493 29876 22573 22573 1 0 0 0 0 0 0 0 0 YEELQVTVGR AQRSKEEAEALYHSKYEELQVTVGRHGDSL LYHSKYEELQVTVGRHGDSLKEIKIEISEL K Y E G R H 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 2 0 0 10 0 2 0 1192.6088 CON__P35908v2;CON__P35908 CON__P35908v2 375 384 yes no 2 8.5095E-49 186.25 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 308060000 53482000 38622000 0 0 87868000 128090000 0 0 + 5010 16 5494 29877;29878;29879;29880 22574;22575;22576;22577;22578 22578 4 53482000 39534000 0 0 106000000 141890000 0 0 YEGIDER SELATNQKLILVCGRYEGIDERVIQTEIDE KLILVCGRYEGIDERVIQTEIDEEWSIGDY R Y E E R V 0 1 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 7 0 2 0 880.39266 P0A873 P0A873 115 121 trmD tRNA (guanine-N(1)-)-methyltransferase yes yes 2 2.4265E-12 132.09 By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 267130000 54291000 83456000 856130 0 64197000 64330000 0 0 5011 140 5495 29881;29882;29883;29884;29885 22579;22580;22581;22582 22582 3 54291000 85425000 7274400 0 77441000 71264000 0 0 YENEVALR QIDNARLAADDFRLKYENEVALRQSVEADI ADDFRLKYENEVALRQSVEADINGLRRVLD K Y E L R Q 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 8 0 2 1 992.49271 CON__P13645 CON__P13645 238 245 yes yes 2 1.7254E-34 156.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 1 205170000 28004000 0 5153700 6489100 80727000 66111000 6605200 12078000 + 5012 12 5496 29886;29887;29888;29889;29890;29891;29892;29893;29894 22583;22584;22585 22584 3 32732000 0 43790000 49197000 98437000 73236000 50835000 69315000 YENMEGKIDRP LCDIRQVIFNPNLFPYENMEGKIDRPEEYA NLFPYENMEGKIDRPEEYADIATKCVTNFR P Y E R P E 0 1 1 1 0 0 2 1 0 1 0 1 1 0 1 0 0 0 1 0 0 0 11 2 2 0 1350.6238 P0A8E1 P0A8E1 95 105 ycfP UPF0227 protein YcfP yes yes 2;3 0.00033804 62.408 By MS/MS By MS/MS By MS/MS By MS/MS 2 4 3 4 66252000 7157200 10448000 0 0 27965000 20682000 0 0 5013 143 5497;5498 29895;29896;29897;29898;29899;29900;29901;29902;29903;29904;29905;29906;29907 22586;22587;22588;22589;22590;22591;22592 22588 137 7 43205000 62531000 0 0 39814000 29482000 0 0 YEPIPVQNVEPTLGIGAPTDK VQEGKEDDVGNIVHKYEPIPVQNVEPTLGI QNVEPTLGIGAPTDKVFMIEEAQRPGEYMT K Y E D K V 1 0 1 1 0 1 2 2 0 2 1 1 0 0 4 0 2 0 1 2 0 0 21 0 2 5 2237.158 P76403 P76403 218 238 yegQ Uncharacterized protease YegQ yes yes 2 1.1067E-39 123.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 88339000 21508000 19495000 0 0 18287000 29048000 0 0 5014 424 5499 29908;29909;29910;29911 22593;22594;22595;22596 22594 4 21508000 19955000 0 0 22060000 32179000 0 0 YEQLIAKNRKDIE PGKDLTKTLNDMRQEYEQLIAKNRKDIENQ QEYEQLIAKNRKDIENQYETQITQIEHEVS E Y E I E N 1 1 1 1 0 1 2 0 0 2 1 2 0 0 0 0 0 0 1 0 0 0 13 3 1 1 1618.8679 CON__P35527 CON__P35527 330 342 yes yes 3 5.4286E-11 93.959 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1 1 63896000 9710800 8528800 2906700 3616400 6623500 6997400 13674000 11838000 + 5015 15 5500 29912;29913;29914;29915;29916;29917;29918;29919;29920 22597;22598;22599;22600;22601 22598 5 149200000 130070000 24697000 27418000 101970000 90226000 105240000 67934000 YEQLIAKNRKDIENQYE PGKDLTKTLNDMRQEYEQLIAKNRKDIENQ QLIAKNRKDIENQYETQITQIEHEVSSSGQ E Y E Y E T 1 1 2 1 0 2 3 0 0 2 1 2 0 0 0 0 0 0 2 0 0 0 17 3 2 1 2153.0753 CON__P35527 CON__P35527 330 346 yes yes 3 2.7971E-11 84.508 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 157240000 0 9572700 0 11351000 22543000 24301000 38527000 50944000 + 5016 15 5501 29921;29922;29923;29924;29925;29926 22602;22603;22604;22605;22606 22604 5 0 145990000 0 86059000 347080000 368320000 296510000 292360000 YERGVKIIGA SFLPAFIGARPYHQAYERGVKIIGATAHYV PYHQAYERGVKIIGATAHYVNDNLDEGPII A Y E G A T 1 1 0 0 0 0 1 2 0 2 0 1 0 0 0 0 0 0 1 1 0 0 10 2 1 0 1104.6291 P37051 P37051 206 215 purU Formyltetrahydrofolate deformylase yes yes 3 0.0084629 42.395 By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 2 1 1 1 18220000 5436100 2998900 0 0 1704700 5901200 2179400 0 5017 354 5502 29927;29928;29929;29930;29931;29932;29933;29934 22607 22607 1 35305000 32143000 0 0 2427000 8412200 16773000 0 YETIDAPQIDDLMAR DNMDILHAMKDALMKYETIDAPQIDDLMAR YETIDAPQIDDLMARRDVRPPAGWEEPGAS K Y E A R R 2 1 0 3 0 1 1 0 0 2 1 0 1 0 1 0 1 0 1 0 0 0 15 0 1 3 1749.8244 P0AAI3 P0AAI3 581 595 ftsH ATP-dependent zinc metalloprotease FtsH yes yes 2 4.1939E-18 121.08 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22729000 6843500 5436100 0 0 4993700 5455600 0 0 5018 185 5503 29935;29936;29937;29938 22608;22609;22610;22611 22610 4 6843500 5564400 0 0 6023900 6043600 0 0 YFAETTALRPDCAIIGEPTSLQPVR ILATADEETSMAGARYFAETTALRPDCAII DCAIIGEPTSLQPVRAHKGHISNAIRIQGQ R Y F V R A 3 2 0 1 1 1 2 1 0 2 2 0 0 1 3 1 3 0 1 1 0 0 25 1 2 6 2804.4167 P23908 P23908 153 177 argE Acetylornithine deacetylase yes yes 3 1.2634E-164 207.55 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 359140000 82140000 67049000 0 0 100770000 109180000 0 0 5019 308 5504 29939;29940;29941;29942 22612;22613;22614;22615 22614 4 82140000 68632000 0 0 121560000 120940000 0 0 YFDEDHSNLIVGPVNK IFPSTSEVYGMCSDKYFDEDHSNLIVGPVN FDEDHSNLIVGPVNKPRWIYSVSKQLLDRV K Y F N K P 0 0 2 2 0 0 1 1 1 1 1 1 0 1 1 1 0 0 1 2 0 0 16 0 1 1 1845.8897 P77398 P77398 443 458 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.0060898 32.815 By MS/MS By MS/MS By matching 1 1 1 22661000 8631700 8493400 0 0 5535800 0 0 0 5020 432 5505 29943;29944;29945 22616;22617 22616 2 8631700 8693900 0 0 6677800 0 0 0 YFDEDHSNLIVGPVNKPR IFPSTSEVYGMCSDKYFDEDHSNLIVGPVN EDHSNLIVGPVNKPRWIYSVSKQLLDRVIW K Y F P R W 0 1 2 2 0 0 1 1 1 1 1 1 0 1 2 1 0 0 1 2 0 0 18 1 1 2 2099.0436 P77398 P77398 443 460 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 2;3;4 0 369.69 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 11166000000 3239100000 2365200000 0 0 2184400000 3376800000 0 0 5021 432 5506 29946;29947;29948;29949;29950;29951;29952;29953;29954;29955;29956;29957;29958 22618;22619;22620;22621;22622;22623;22624;22625;22626;22627;22628;22629 22620 12 3239100000 2421100000 0 0 2660500000 3740700000 0 0 YFELWPR HYMALYPDAWLSGQRYFELWPRVINLRHSG DAWLSGQRYFELWPRVINLRHSGVL_____ R Y F P R V 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 7 0 1 1 1009.5022 P24252 P24252 153 159 ybgA Uncharacterized protein YbgA yes yes 2 1.2163E-24 146.21 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 122040000 36091000 31268000 0 0 25616000 29067000 0 0 5022 313 5507 29959;29960;29961;29962 22630;22631;22632;22633;22634 22634 5 36091000 32006000 0 0 30901000 32200000 0 0 YFGTSDMEYGK GHRETFADIGQTLAKYFGTSDMEYGKAMF_ TLAKYFGTSDMEYGKAMF____________ K Y F G K A 0 0 0 1 0 0 1 2 0 0 0 1 1 1 0 1 1 0 2 0 0 0 11 0 1 0 1296.5333 P0A6K6 P0A6K6 394 404 deoB Phosphopentomutase yes yes 2 4.7831E-05 113.62 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 115630000 33235000 26081000 0 0 28710000 27602000 0 0 5023 75 5508 29963;29964;29965;29966 22635;22636;22637;22638 22636 4 33235000 26697000 0 0 34633000 30577000 0 0 YFNELEAENIK CDEPSTMELKVKTLRYFNELEAENIKGL__ KTLRYFNELEAENIKGL_____________ R Y F I K G 1 0 2 0 0 0 3 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 11 0 3 1 1368.6561 P0A759 P0A759 254 264 nagB Glucosamine-6-phosphate deaminase yes yes 2 1.9085E-12 150.27 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 95345000 24539000 22526000 0 0 22487000 25793000 0 0 5024 96 5509 29967;29968;29969;29970 22639;22640;22641;22642 22642 4 24539000 23058000 0 0 27127000 28573000 0 0 YFTLNAVSK SHGDQEIFTREEMIKYFTLNAVSKSASAFN REEMIKYFTLNAVSKSASAFNTDKLLWLNH K Y F S K S 1 0 1 0 0 0 0 0 0 0 1 1 0 1 0 1 1 0 1 1 0 0 9 0 0 1 1041.5495 P04805 P04805 285 293 gltX Glutamate--tRNA ligase yes yes 2 0.0023696 69.812 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 50518000 10444000 11122000 0 0 12311000 16642000 0 0 5025 45 5510 29971;29972;29973;29974 22643;22644;22645;22646 22644 4 10444000 11385000 0 0 14851000 18435000 0 0 YGIKNLE AAQVAAERCADAVKEYGIKNLEVMVKGPGP RCADAVKEYGIKNLEVMVKGPGPGRESTIR E Y G L E V 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 7 1 0 0 835.44397 P0A7R9 P0A7R9 77 83 rpsK 30S ribosomal protein S11 yes yes 2 4.177E-35 154.46 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 664030000 94931000 73183000 1243700 0 79821000 128500000 0 286350000 5026 121 5511 29975;29976;29977;29978;29979;29980 22647;22648;22649;22650 22649 4 1458600000 1116100000 10567000 0 1228900000 1947600000 0 1643300000 YGLDKEMVMDFFR DRQLSAWEAGILTRRYGLDKEMVMDFFREN RRYGLDKEMVMDFFRENNSCSTLRFFMAGY R Y G F R E 0 1 0 2 0 0 1 1 0 0 1 1 2 2 0 0 0 0 1 1 0 0 13 1 1 0 1649.7582 P64574 P64574 64 76 yghW Uncharacterized protein YghW yes yes 3 3.0512E-09 88.075 By MS/MS By MS/MS By MS/MS 1 1 1 99868000 35357000 42879000 0 0 21633000 0 0 0 5027 396 5512 29981;29982;29983 22651;22652 22651 2 35357000 43891000 0 0 26096000 0 0 0 YGLFSEVR RHDWFVERLNTINHRYGLFSEVRGLGLLIG LNTINHRYGLFSEVRGLGLLIGCVLNADYA R Y G V R G 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 8 0 1 0 969.49198 P77581 P77581 326 333 astC Succinylornithine transaminase yes yes 2 1.9083E-45 164 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 246420000 74968000 66542000 0 0 52633000 52275000 0 0 5028 437 5513 29984;29985;29986;29987 22653;22654;22655;22656 22653 4 74968000 68112000 0 0 63492000 57909000 0 0 YGLVDSILTHRN DTERDRFLSAPEAVEYGLVDSILTHRN___ AVEYGLVDSILTHRN_______________ E Y G R N - 0 1 1 1 0 0 0 1 1 1 2 0 0 0 0 1 1 0 1 1 0 0 12 1 0 0 1386.7256 P0A6G7 P0A6G7 196 207 clpP ATP-dependent Clp protease proteolytic subunit yes yes 2;3 5.885E-18 125.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 195770000 12245000 14808000 30526000 44669000 24631000 22176000 21690000 25026000 5029 69 5514 29988;29989;29990;29991;29992;29993;29994;29995;29996;29997;29998;29999;30000;30001;30002;30003 22657;22658;22659;22660;22661;22662;22663;22664;22665;22666;22667;22668;22669;22670;22671;22672 22669 16 188140000 225820000 259380000 338660000 379220000 336110000 166930000 143620000 YGQQGSGSGQSPSR SSHGQHGSGSSQSSRYGQQGSGSGQSPSRG RYGQQGSGSGQSPSRGRHGSDFGHSSSYGQ R Y G S R G 0 1 0 0 0 3 0 4 0 0 0 0 0 0 1 4 0 0 1 0 0 0 14 0 0 1 1394.6175 CON__Q86YZ3 CON__Q86YZ3 649 662 yes yes 2 0.0061933 47.559 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 5942100 1627400 1525600 0 0 1732800 1056200 0 0 + 5030 22 5515 30004;30005;30006;30007 22673 22673 1 1627400 1561600 0 0 2090300 1170100 0 0 YGQYDENLVQRVP EVGDKFDVAVGANDAYGQYDENLVQRVPKD DAYGQYDENLVQRVPKDVFMGVDELQVGMR A Y G V P K 0 1 1 1 0 2 1 1 0 0 1 0 0 0 1 0 0 0 2 2 0 0 13 1 1 0 1579.7631 P0A9K9 P0A9K9 68 80 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 5.0126E-07 87.913 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 27983000 2506700 1996300 0 0 15693000 7787300 0 0 5031 169 5516 30008;30009;30010;30011 22674 22674 1 15132000 11948000 0 0 22342000 11101000 0 0 YGTLPLVR SRFEPCGLTQLYGLKYGTLPLVRRTGGLAD TQLYGLKYGTLPLVRRTGGLADTVSDCSLE K Y G V R R 0 1 0 0 0 0 0 1 0 0 2 0 0 0 1 0 1 0 1 1 0 0 8 0 0 1 917.53345 P0A6U8 P0A6U8 389 396 glgA Glycogen synthase yes yes 2 0.00012291 107.43 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64264000 22042000 15253000 0 0 11732000 15236000 0 0 5032 83 5517 30012;30013;30014;30015 22675;22676;22677;22678 22676 4 22042000 15613000 0 0 14152000 16878000 0 0 YGTVIMDSRHP LREAVLRAIPQLRGAYGTVIMDSRHPDTLL LRGAYGTVIMDSRHPDTLLAARSGSPLVIG A Y G H P D 0 1 0 1 0 0 0 1 1 1 0 0 1 0 1 1 1 0 1 1 0 0 11 1 0 0 1274.6078 P17169 P17169 157 167 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2;3 7.306E-44 162.64 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4 5 1 5 4 1 4561800000 314730000 272820000 3645800 0 1897000000 2067300000 6295200 0 5033 288 5518;5519 30016;30017;30018;30019;30020;30021;30022;30023;30024;30025;30026;30027;30028;30029;30030;30031;30032;30033;30034;30035 22679;22680;22681;22682;22683;22684;22685;22686;22687;22688;22689;22690;22691;22692;22693;22694;22695 22683 245 16 1899900000 1632900000 30978000 0 2700800000 2946900000 48450000 0 YGYSVSDRQQFVGE GFLRRHTHDDYQNYEYGYSVSDRQQFVGEF EYGYSVSDRQQFVGEFTGERKGDLAAVAVK E Y G G E F 0 1 0 1 0 2 1 2 0 0 0 0 0 1 0 2 0 0 2 2 0 0 14 1 0 0 1633.7372 P76403 P76403 352 365 yegQ Uncharacterized protease YegQ yes yes 2 0.0038147 42.802 By MS/MS 1 0 0 0 0 0 0 0 0 0 5034 424 5520 30036 22696 22696 1 0 0 0 0 0 0 0 0 YHDPANWPLIR PKGDKQRRLHKALLRYHDPANWPLIRQALE ALLRYHDPANWPLIRQALEAMGKKHLIGSR R Y H I R Q 1 1 1 1 0 0 0 0 1 1 1 0 0 0 2 0 0 1 1 0 0 0 11 0 0 3 1380.6939 Q46861 Q46861 646 656 ygiQ UPF0313 protein YgiQ yes yes 3 0.003037 46.352 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 33459000 8617800 11387000 0 0 5854100 7600600 0 0 5035 441 5521 30037;30038;30039;30040 22697;22698;22699;22700 22697 4 8617800 11656000 0 0 7061900 8419800 0 0 YHGTSYNLEPDIK FYAAKVEEQNQRHQRYHGTSYNLEPDIKSS QRYHGTSYNLEPDIKSSPGGLRDIHTLQWV R Y H I K S 0 0 1 1 0 0 1 1 1 1 1 1 0 0 1 1 1 0 2 0 0 0 13 0 1 1 1535.7256 P27249 P27249 208 220 glnD Bifunctional uridylyltransferase/uridylyl-removing enzyme;[Protein-PII] uridylyltransferase;[Protein-PII]-UMP uridylyl-removing enzyme yes yes 2;3 2.6279E-57 166.14 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 167550000 44852000 44035000 0 0 37977000 40683000 0 0 5036 320 5522 30041;30042;30043;30044;30045;30046;30047;30048 22701;22702;22703;22704;22705;22706;22707;22708 22708 8 44852000 45075000 0 0 45812000 45068000 0 0 YHHMRPASLEK SGYAKPEERILILARYHHMRPASLEKAATR ILARYHHMRPASLEKAATRWPKLQIDFMTI R Y H E K A 1 1 0 0 0 0 1 0 2 0 1 1 1 0 1 1 0 0 1 0 0 0 11 1 1 2 1367.6768 P15038 P15038 569 579 helD Helicase IV yes yes 3 9.8975E-05 75.416 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 51367000 9068400 19773000 0 0 14209000 8316400 0 0 5037 281 5523 30049;30050;30051;30052 22709;22710;22711;22712;22713 22710 5 9068400 20239000 0 0 17141000 9212700 0 0 YHPDRNQGDKEAEAK EEREIRKAYKRLAMKYHPDRNQGDKEAEAK YHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ K Y H A K F 2 1 1 2 0 1 2 1 1 0 0 2 0 0 1 0 0 0 1 0 0 0 15 2 2 3 1756.8129 P08622 P08622 32 46 dnaJ Chaperone protein DnaJ yes yes 3;4 0.00014876 63.754 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 45805000 13671000 23885000 0 0 5013100 3235800 0 0 5038 61 5524 30053;30054;30055;30056;30057;30058;30059;30060 22714;22715;22716 22716 3 13671000 24448000 0 0 6047400 3584600 0 0 YHSIIIMTDADVDGSHIR GCGIGRDEYNPDKLRYHSIIIMTDADVDGS IIIMTDADVDGSHIRTLLLTFFYRQMPEIV R Y H I R T 1 1 0 3 0 0 0 1 2 4 0 0 1 0 0 2 1 0 1 1 0 0 18 0 0 1 2041.9891 P0AES6 P0AES6 490 507 gyrB DNA gyrase subunit B yes yes 3 5.8257E-18 94.882 By matching By matching By MS/MS By MS/MS 1 1 1 1 28103000 6928600 0 1538400 0 8414200 11222000 0 0 5039 239 5525 30061;30062;30063;30064 22717;22718 22718 2 6928600 0 13071000 0 10150000 12431000 0 0 YHYEAFTVPYPTLNLGHIHGGDASNR AIGHILQLRDNLKERYHYEAFTVPYPTLNL TLNLGHIHGGDASNRICACCELHMDIRPLP R Y H N R I 2 1 2 1 0 0 1 3 3 1 2 0 0 1 2 1 2 0 3 1 0 0 26 0 1 4 2928.3943 P23908 P23908 227 252 argE Acetylornithine deacetylase yes yes 3;4;5 4.7918E-145 196.81 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 778690000 146950000 142110000 0 0 237860000 251770000 0 0 5040 308 5526 30065;30066;30067;30068;30069;30070;30071;30072;30073;30074 22719;22720;22721;22722;22723;22724;22725;22726;22727;22728;22729 22725 11 146950000 145470000 0 0 286930000 278900000 0 0 YIADKHNMLGGCPK IDGDVKLTQSMAIIRYIADKHNMLGGCPKE RYIADKHNMLGGCPKERAEISMLEGAVLDI R Y I P K E 1 0 1 1 1 0 0 2 1 1 1 2 1 0 1 0 0 0 1 0 0 0 14 1 0 2 1602.7647 GST-Nek6 GST-Nek6 74 87 yes yes 2;3 4.0191E-39 151.15 By MS/MS By MS/MS 3 3 307100000 0 0 0 0 149180000 157920000 0 0 5041 23 5527;5528 30075;30076;30077;30078;30079;30080 22730;22731;22732;22733;22734;22735 22733 32 6 0 0 0 0 179950000 174940000 0 0 YIADNRIHAVSIKAYTPAE SRVKKQQTVYGPLMEYIADNRIHAVSIKAY NRIHAVSIKAYTPAEWARDRKLNGF_____ E Y I A E W 4 1 1 1 0 0 1 0 1 3 0 1 0 0 1 1 1 0 2 1 0 0 19 2 0 5 2131.1062 P0A9W6 P0A9W6 56 74 ibaG Acid stress protein IbaG yes yes 3;4 0.002784 31.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 184600000 0 0 45938000 63195000 0 0 32242000 43222000 5042 178 5529 30081;30082;30083;30084;30085;30086;30087;30088 22736;22737;22738;22739;22740;22741 22740 6 0 0 390330000 479120000 0 0 248140000 248040000 YIAWPLQGWQATFGGGDHPPK IEAIPQIDKYLKSSKYIAWPLQGWQATFGG QGWQATFGGGDHPPKSDLEVLFQGPLGSMA K Y I P K S 2 0 0 1 0 2 0 4 1 1 1 1 0 1 3 0 1 2 1 0 0 0 21 0 0 5 2325.1331 GST-Nek6 GST-Nek6 198 218 yes yes 2;3 1.4196E-133 195.78 By MS/MS By MS/MS 3 2 418430000 0 0 0 0 378630000 39793000 0 0 5043 23 5530;5531 30089;30090;30091;30092;30093 22742;22743;22744 22742 41 2 0 0 0 0 456750000 44082000 0 0 YIDFAGGIAVNALGHAHPE VRGEGSRLWDQQGKEYIDFAGGIAVNALGH AGGIAVNALGHAHPELREALNEQASKFWHT E Y I P E L 4 0 1 1 0 0 1 3 2 2 1 0 0 1 1 0 0 0 1 1 0 0 19 0 0 5 1950.9588 P77581 P77581 41 59 astC Succinylornithine transaminase yes yes 3 0.0020929 41.86 By MS/MS By MS/MS 1 1 7653900 0 0 0 0 3607400 4046500 0 0 5044 437 5532 30094;30095 22745 22745 1 0 0 0 0 55540000 61331000 0 0 YIFELNPDHVLVK AKLFAAAGQKVPEVKYIFELNPDHVLVKRA VKYIFELNPDHVLVKRAADTEDEAKFSEWV K Y I V K R 0 0 1 1 0 0 1 0 1 1 2 1 0 1 1 0 0 0 1 2 0 0 13 0 1 1 1585.8504 P0A6Z3 P0A6Z3 566 578 htpG Chaperone protein HtpG yes yes 2;3 5.3179E-27 170.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 193200000 54631000 46930000 0 0 45924000 45712000 0 0 5045 88 5533 30096;30097;30098;30099;30100;30101;30102;30103 22746;22747;22748;22749;22750;22751;22752;22753 22750 8 54631000 48037000 0 0 55398000 50639000 0 0 YIFELNPDHVLVKR AKLFAAAGQKVPEVKYIFELNPDHVLVKRA KYIFELNPDHVLVKRAADTEDEAKFSEWVE K Y I K R A 0 1 1 1 0 0 1 0 1 1 2 1 0 1 1 0 0 0 1 2 0 0 14 1 1 1 1741.9515 P0A6Z3 P0A6Z3 566 579 htpG Chaperone protein HtpG yes yes 3 0.019071 23.956 By MS/MS By MS/MS 1 1 11537000 6456300 5080400 0 0 0 0 0 0 5046 88 5534 30104;30105 22754 22754 1 6456300 5200300 0 0 0 0 0 0 YILTPVLWK RVTLAQLLDPMVEAKYILTPVLWKYLYRYA PMVEAKYILTPVLWKYLYRYAKKHQARGNG K Y I W K Y 0 0 0 0 0 0 0 0 0 1 2 1 0 0 1 0 1 1 1 1 0 0 9 0 0 1 1131.6692 P0AED9 P0AED9 322 330 dcm DNA-cytosine methyltransferase yes yes 2 0.0011415 89.142 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 157870000 46135000 53642000 0 0 23692000 34397000 0 0 5047 235 5535 30106;30107;30108;30109 22755;22756;22757;22758 22757 4 46135000 54908000 0 0 28580000 38104000 0 0 YIQGADVINR ______________________________ QSPGKYIQGADVINRLGEYLKPLAERWLVV K Y I N R L 1 1 1 1 0 1 0 1 0 2 0 0 0 0 0 0 0 0 1 1 0 0 10 0 0 1 1147.5986 P0A9S5 P0A9S5 11 20 gldA Glycerol dehydrogenase yes yes 2 0.00055823 81.296 By matching By matching By MS/MS By MS/MS 1 1 1 1 22738000 7308600 5033100 0 0 3973700 6422500 0 0 5048 176 5536 30110;30111;30112;30113 22759;22760 22759 2 7308600 5151900 0 0 4793500 7114700 0 0 YIVNEVQDVYR PHDILRLRGVHAVTRYIVNEVQDVYRLQGV AVTRYIVNEVQDVYRLQGVKINDKHIEVIV R Y I Y R L 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 11 0 1 0 1396.6987 P0A8T7 P0A8T7 1232 1242 rpoC DNA-directed RNA polymerase subunit beta yes yes 2 1.9782E-07 108.98 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 34837000 10197000 7905700 0 0 7968500 8765500 0 0 5049 153 5537 30114;30115;30116;30117 22761;22762;22763;22764 22764 4 10197000 8092300 0 0 9612400 9710200 0 0 YKDMSYVK ALIDAGVRSFKIEGRYKDMSYVKNITAHYR SFKIEGRYKDMSYVKNITAHYRQMLDAIIE R Y K V K N 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 2 1 0 0 8 1 0 0 1032.495 P76104 P76104 245 252 ydcP Uncharacterized protease YdcP yes yes 2 0.004236 91.853 By matching By MS/MS By matching By MS/MS 1 1 1 1 13221000 4018300 4500900 0 0 2470300 2231200 0 0 5050 416 5538 30118;30119;30120;30121 22765 22765 1 4018300 4607200 0 0 2979900 2471600 0 0 YKLDGVKPPKKE YHELGKHKWVAMGEEYKLDGVKPPKKETME GEEYKLDGVKPPKKETMERVKGILEQYGHK E Y K K E T 0 0 0 1 0 0 1 1 0 0 1 4 0 0 2 0 0 0 1 1 0 0 12 4 0 2 1400.8028 P0A9N4 P0A9N4 217 228 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 3;4 0.0021929 41.242 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 2 2 274240000 11966000 16903000 59810000 56600000 5267700 7380300 53377000 62940000 5051 171 5539 30122;30123;30124;30125;30126;30127;30128;30129;30130;30131;30132;30133;30134;30135;30136;30137 22766;22767;22768 22767 3 183860000 257770000 508200000 429120000 81101000 111860000 410800000 361200000 YKVPLDEYPKR TPWFIKPGREDLIERYKVPLDEYPKRCVEQ LIERYKVPLDEYPKRCVEQLANWHKELEEY R Y K K R C 0 1 0 1 0 0 1 0 0 0 1 2 0 0 2 0 0 0 2 1 0 0 11 2 1 2 1406.7558 P06720 P06720 288 298 melA Alpha-galactosidase yes yes 3 0.0038421 35.006 By MS/MS 1 0 0 0 0 0 0 0 0 0 5052 52 5540 30138 22769 22769 1 0 0 0 0 0 0 0 0 YLAEQAMDR DECDCRKPKVKLVERYLAEQAMDRANSYVI VKLVERYLAEQAMDRANSYVIGDRATDIQL R Y L D R A 2 1 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 9 0 1 2 1095.5019 P06987 P06987 114 122 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 2 2.7648E-37 179.21 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 871100000 232960000 246750000 0 0 173050000 218340000 0 0 5053 55 5541;5542 30139;30140;30141;30142;30143;30144;30145;30146 22770;22771;22772;22773;22774;22775;22776;22777 22777 72 8 232960000 252570000 0 0 208760000 241870000 0 0 YLDGLTAER NLEPIFQGYIDSLKRYLDGLTAERTSQNSE IDSLKRYLDGLTAERTSQNSELNNMQDLVE R Y L E R T 1 1 0 1 0 0 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 9 0 1 1 1036.5189 CON__P35908v2;CON__P35908 CON__P35908v2 239 247 yes no 2 2.4295E-36 155.1 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 590090000 74254000 82584000 0 0 219950000 213310000 0 0 + 5054 16 5543 30147;30148;30149;30150 22778;22779;22780;22781 22781 4 74254000 84533000 0 0 265320000 236300000 0 0 YLDLLQAR DYIAMLEEALAGYGRYLDLLQARAEPDLII ALAGYGRYLDLLQARAEPDLIIQAFNEYQL R Y L A R A 1 1 0 1 0 1 0 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 8 0 0 1 990.54983 P04993 P04993 418 425 recD RecBCD enzyme subunit RecD yes yes 2 1.5185E-07 121.29 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 54296000 10803000 22476000 0 0 10001000 11016000 0 0 5055 46 5544 30151;30152;30153;30154;30155 22782;22783;22784;22785 22783 4 10803000 57041000 0 0 12064000 12204000 0 0 YLDQGNQTQP GLRYSANNYVKWKDEYLDQGNQTQP_____ KWKDEYLDQGNQTQP_______________ E Y L Q P - 0 0 1 1 0 3 0 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 10 0 0 0 1162.5255 P0A9W9 P0A9W9 175 184 yrdA Protein YrdA yes yes 2 0.0013187 72.485 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 355130000 41107000 27472000 66110000 64220000 14375000 15491000 61621000 64731000 5056 179 5545 30156;30157;30158;30159;30160;30161;30162;30163 22786;22787;22788 22786 3 631600000 418950000 561730000 486890000 221320000 234790000 474250000 371480000 YLEKLTKP ______________________________ MKTQLKAYLEKLTKPVELIATLDDSAKSAE A Y L K P V 0 0 0 0 0 0 1 0 0 0 2 2 0 0 1 0 1 0 1 0 0 0 8 2 1 0 990.57498 P35340 P35340 13 20 ahpF Alkyl hydroperoxide reductase subunit F yes yes 2 0.020022 69.998 By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 8817600 1200100 1028200 0 0 1639300 4950000 0 0 5057 348 5546 30164;30165;30166;30167 22789 22789 0 7244200 6153600 0 0 2333900 7056200 0 0 YLEPIPK RRDKAINHDFRQLEKYLEPIPKADWEQVKA HDFRQLEKYLEPIPKADWEQVKAYYYAM__ K Y L P K A 0 0 0 0 0 0 1 0 0 1 1 1 0 0 2 0 0 0 1 0 0 0 7 0 1 2 858.48511 P27294 P27294 197 203 inaA Protein InaA yes yes 2 0.0028379 76.847 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 98752000 22390000 26115000 0 0 23310000 26937000 0 0 5058 321 5547 30168;30169;30170;30171 22790;22791;22792;22793 22791 4 22390000 26731000 0 0 28119000 29840000 0 0 YLFAENPVVHLDTATSGSK LFNETSDDFEFNADRYLFAENPVVHLDTAT ENPVVHLDTATSGSK_______________ R Y L S K - 2 0 1 1 0 0 1 1 1 0 2 1 0 1 1 2 2 0 1 2 0 0 19 0 1 3 2048.0215 P0ACL2 P0ACL2 240 258 exuR Exu regulon transcriptional regulator yes yes 3 0.00022471 45.257 By MS/MS By MS/MS 1 1 12599000 0 0 0 0 5009300 7589500 0 0 5059 216 5548 30172;30173 22794 22794 1 0 0 0 0 6042700 8407500 0 0 YLFENFAVR ______________________________ HDQLHRYLFENFAVRGELVTVSETLQQILE R Y L V R G 1 1 1 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 1 1 0 0 9 0 1 1 1157.5869 P0A6Y5 P0A6Y5 10 18 hslO 33 kDa chaperonin yes yes 2 0.0021043 86.953 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 25260000 6662900 5858300 0 0 5368400 7370500 0 0 5060 85 5549 30174;30175;30176;30177 22795;22796;22797;22798 22798 4 6662900 5996600 0 0 6475900 8164900 0 0 YLFIDRDGTLISEPPSDFQVDR ______________________________ GTLISEPPSDFQVDRFDKLAFEPGVIPELL K Y L D R F 0 2 0 4 0 1 1 1 0 2 2 0 0 2 2 2 1 0 1 1 0 0 22 1 1 2 2582.2653 P06987 P06987 5 26 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3 7.183E-21 98.132 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 89005000 21808000 23016000 0 0 16330000 27850000 0 0 5061 55 5550 30178;30179;30180;30181 22799;22800;22801;22802;22803;22804 22801 6 21808000 23560000 0 0 19699000 30852000 0 0 YLFIDRDGTLISEPPSDFQVDRFDK ______________________________ ISEPPSDFQVDRFDKLAFEPGVIPELLKLQ K Y L D K L 0 2 0 5 0 1 1 1 0 2 2 1 0 3 2 2 1 0 1 1 0 0 25 2 1 2 2972.4556 P06987 P06987 5 29 hisB Histidine biosynthesis bifunctional protein HisB;Histidinol-phosphatase;Imidazoleglycerol-phosphate dehydratase yes yes 3;4 6.5266E-08 50.945 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 76454000 16326000 12589000 0 0 19888000 27650000 0 0 5062 55 5551 30182;30183;30184;30185;30186;30187;30188;30189 22805;22806;22807;22808;22809;22810;22811 22810 7 16326000 12886000 0 0 23991000 30630000 0 0 YLKPLAE GKYIQGADVINRLGEYLKPLAERWLVVGDK DVINRLGEYLKPLAERWLVVGDKFVLGFAQ E Y L A E R 1 0 0 0 0 0 1 0 0 0 2 1 0 0 1 0 0 0 1 0 0 0 7 1 0 2 832.46945 P0A9S5 P0A9S5 24 30 gldA Glycerol dehydrogenase yes yes 2 0.013067 75.311 By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 23537000 0 0 5490700 6952700 0 0 6007300 5086200 5063 176 5552 30190;30191;30192;30193 22812;22813 22813 2 0 0 46654000 52712000 0 0 46234000 29189000 YLLQQLDDTE TDDVNPLQAWEAADEYLLQQLDDTEIRGPV EAADEYLLQQLDDTEIRGPVLILNDAFGAL E Y L T E I 0 0 0 2 0 2 1 0 0 0 3 0 0 0 0 0 1 0 1 0 0 0 10 0 0 0 1236.5874 P42596 P42596 34 43 rlmG Ribosomal RNA large subunit methyltransferase G yes yes 2 4.558E-05 104.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 56465000 5360100 5496400 0 0 2686200 1787800 21138000 19996000 5064 366 5553 30194;30195;30196;30197;30198;30199 22814;22815;22816 22816 3 82357000 83821000 0 0 41357000 27097000 162690000 114750000 YLSLLPYTDR AKYQRQLARAIKRARYLSLLPYTDRHQ___ IKRARYLSLLPYTDRHQ_____________ R Y L D R H 0 1 0 1 0 0 0 0 0 0 3 0 0 0 1 1 1 0 2 0 0 0 10 0 0 1 1239.6499 P0A7T7 P0A7T7 64 73 rpsR 30S ribosomal protein S18 yes yes 2 4.0202E-28 145.92 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 196530000 48657000 42631000 0 0 56059000 49181000 0 0 5065 125 5554 30200;30201;30202;30203 22817;22818;22819;22820 22820 4 48657000 43638000 0 0 67625000 54482000 0 0 YLSLLTGELPR VIFINQLQGLWPVERYLSLLTGELPRLRDD PVERYLSLLTGELPRLRDDSDGYGPRGRDF R Y L P R L 0 1 0 0 0 0 1 1 0 0 4 0 0 0 1 1 1 0 1 0 0 0 11 0 1 1 1260.7078 P34209 P34209 208 218 ydcF Protein YdcF yes yes 2 5.2234E-05 95.642 By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 77438000 17683000 13778000 0 0 19912000 26066000 0 0 5066 347 5555 30204;30205;30206;30207 22821 22821 1 17683000 14103000 0 0 24020000 28875000 0 0 YMCKTGPEAILE TVKGSDYIGDQDAIEYMCKTGPEAILELEH AIEYMCKTGPEAILELEHMGLPFSRLDDGR E Y M L E L 1 0 0 0 1 0 2 1 0 1 1 1 1 0 1 0 1 0 1 0 0 0 12 1 1 2 1410.6523 P0AC41 P0AC41 87 98 sdhA Succinate dehydrogenase flavoprotein subunit yes yes 2 0.0094285 45.368 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 1 21830000 1703800 1083700 4568600 5221900 1072700 0 2513900 5665000 5067 203 5556 30208;30209;30210;30211;30212;30213;30214 22822;22823 22823 2 26178000 16526000 38818000 39590000 16515000 0 19348000 32511000 YMHITSTEE LEALKQTYCGPIGAEYMHITSTEEKRWIQQ GPIGAEYMHITSTEEKRWIQQRIESGRATF E Y M E E K 0 0 0 0 0 0 2 0 1 1 0 0 1 0 0 1 2 0 1 0 0 0 9 0 1 0 1109.4699 P0AFG3 P0AFG3 172 180 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 0.0078672 32.47 By MS/MS By MS/MS 1 1 10357000 0 0 0 3494000 0 0 6863100 0 5068 246 5557 30215;30216 22824 22824 1 0 0 0 26490000 0 0 52820000 0 YNAVIDQMLEEGTAYK EWDEGPYYQTKRFDRYNAVIDQMLEEGTAY NAVIDQMLEEGTAYKCYCSKERLEALREEQ R Y N Y K C 2 0 1 1 0 1 2 1 0 1 1 1 1 0 0 0 1 0 2 1 0 0 16 0 2 2 1843.8662 P04805 P04805 82 97 gltX Glutamate--tRNA ligase yes yes 2 6.6656E-58 162.6 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 62819000 14474000 13613000 0 0 17134000 17598000 0 0 5069 45 5558 30217;30218;30219;30220 22825;22826;22827;22828 22825 4 14474000 13934000 0 0 20669000 19495000 0 0 YNMELTLEEAVR GGRGRQRAARGADLRYNMELTLEEAVRGVT DLRYNMELTLEEAVRGVTKEIRIPTLEECD R Y N V R G 1 1 1 0 0 0 3 0 0 0 2 0 1 0 0 0 1 0 1 1 0 0 12 0 3 1 1466.7075 P08622 P08622 119 130 dnaJ Chaperone protein DnaJ yes yes 2 2.4031E-27 143.89 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 40975000 10406000 5660800 0 0 10582000 14325000 0 0 5070 61 5559;5560 30221;30222;30223;30224;30225 22829;22830;22831;22832;22833 22832 5 10406000 5794400 0 0 12765000 15869000 0 0 YNPDVDDAPR ______________________________ FSIYRYNPDVDDAPRMQDYTLEADEGRDMM R Y N P R M 1 1 1 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 0 10 0 0 3 1160.5098 P07014 P07014 10 19 sdhB Succinate dehydrogenase iron-sulfur subunit yes yes 2 0.021368 40.994 By MS/MS By MS/MS 1 1 10878000 3891000 6986800 0 0 0 0 0 0 5071 56 5561 30226;30227 22834;22835 22834 2 3891000 7151700 0 0 0 0 0 0 YPFGRPTIVR LYVKRMTHHLFHSVRYPFGRPTIVREVAVI FHSVRYPFGRPTIVREVAVIKELERAGVIV R Y P V R E 0 2 0 0 0 0 0 1 0 1 0 0 0 1 2 0 1 0 1 1 0 0 10 1 0 2 1204.6717 P27294 P27294 59 68 inaA Protein InaA yes yes 3 0.00027436 73.887 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 169560000 41097000 41782000 0 0 32853000 53829000 0 0 5072 321 5562 30228;30229;30230;30231 22836;22837;22838;22839 22836 4 41097000 42768000 0 0 39631000 59631000 0 0 YPTLNLGHIHGGDA DNLKERYHYEAFTVPYPTLNLGHIHGGDAS PYPTLNLGHIHGGDASNRICACCELHMDIR P Y P D A S 1 0 1 1 0 0 0 3 2 1 2 0 0 0 1 0 1 0 1 0 0 0 14 0 0 1 1463.7157 P23908 P23908 236 249 argE Acetylornithine deacetylase yes yes 3 0.0011775 40.025 By MS/MS By MS/MS 1 1 70387000 0 0 0 0 43709000 26678000 0 0 5073 308 5563 30232;30233 22840;22841 22840 1 0 0 0 0 62229000 38029000 0 0 YQLGSEHAER DKPFLYLDTHAGAGRYQLGSEHAERTGEYL AGAGRYQLGSEHAERTGEYLEGIARIWQQD R Y Q E R T 1 1 0 0 0 1 2 1 1 0 1 0 0 0 0 1 0 0 1 0 0 0 10 0 2 1 1188.5523 P37634 P37634 48 57 rlmJ Ribosomal RNA large subunit methyltransferase J yes yes 3 0.015533 24.291 By matching By MS/MS By matching By MS/MS 1 1 1 1 13102000 3497200 5104200 0 0 1697100 2803600 0 0 5074 358 5564 30234;30235;30236;30237 22842 22842 1 3497200 5224700 0 0 2047200 3105800 0 0 YQNVGGGCTHWGTIPSK MGLVKQGARVAVIERYQNVGGGCTHWGTIP NVGGGCTHWGTIPSKALRHAVSRIIEFNQN R Y Q S K A 0 0 1 0 1 1 0 4 1 1 0 1 0 0 1 1 2 1 1 1 0 0 17 0 0 1 1860.8577 P27306 P27306 38 54 sthA Soluble pyridine nucleotide transhydrogenase yes yes 3 2.9841E-05 65.943 By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 51864000 15139000 17813000 0 0 8503600 10408000 0 0 5075 323 5565 30238;30239;30240;30241;30242 22843;22844;22845;22846 22845 4 29818000 18233000 0 0 10258000 11530000 0 0 YQQHGMAPLTQEQKPVAK TLVTNKQVQQPVMDRYQQHGMAPLTQEQKP HGMAPLTQEQKPVAKVVNDNAPQTAKEPDY R Y Q A K V 2 0 0 0 0 4 1 1 1 0 1 2 1 0 2 0 1 0 1 1 0 0 18 1 1 4 2053.0415 P0A9A6 P0A9A6 339 356 ftsZ Cell division protein FtsZ yes yes 3 8.5568E-08 75.018 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30735000 4140000 9757500 0 0 5820500 11017000 0 0 5076 161 5566 30243;30244;30245;30246 22847;22848 22847 2 4140000 9987800 0 0 7021300 12205000 0 0 YQQLENLESGWK ______________________________ ______________________________ K Y Q W K W 0 0 1 0 0 2 2 1 0 0 2 1 0 0 0 1 0 1 1 0 0 0 12 0 2 0 1493.7151 P0A8N0 P0A8N0 3 14 matP Macrodomain Ter protein yes yes 2 3.617E-07 117.7 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 42212000 11584000 9982000 0 0 8916700 11729000 0 0 5077 149 5567 30247;30248;30249;30250 22849;22850;22851;22852;22853 22850 5 11584000 10218000 0 0 10756000 12993000 0 0 YQVRTEDGVLVDESP ______________________________ YQVRTEDGVLVDESPVSAPLDYLHGHGSLI A Y Q S P V 0 1 0 2 0 1 2 1 0 0 1 0 0 0 1 1 1 0 1 3 0 0 15 1 2 0 1705.8159 P0A9K9 P0A9K9 13 27 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD yes yes 2 9.5979E-39 140.63 By MS/MS By MS/MS By MS/MS By MS/MS 2 4 5 3 4587200000 394970000 491550000 0 0 2286600000 1414100000 0 0 5078 169 5568 30251;30252;30253;30254;30255;30256;30257;30258;30259;30260;30261;30262;30263;30264 22854;22855;22856;22857;22858;22859;22860;22861;22862;22863;22864;22865 22860 12 2384300000 2942000000 0 0 3255400000 2015800000 0 0 YRAEELAEER AAVKMVRVQAIEKNRYRAEELAEERILDVL IEKNRYRAEELAEERILDVLIPPAKNNWGQ R Y R E R I 2 2 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 10 1 4 2 1264.6048 P0A6H5 P0A6H5 121 130 hslU ATP-dependent protease ATPase subunit HslU yes yes 2;3 1.6427E-06 121.83 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 48263000 18468000 14553000 0 0 8664300 6578400 0 0 5079 71 5569 30265;30266;30267;30268;30269;30270;30271;30272 22866;22867;22868;22869;22870;22871;22872 22866 7 18468000 14896000 0 0 10452000 7287300 0 0 YRDRVSGDIHNIE TTEVKGDGSKVVGLEYRDRVSGDIHNIELA LEYRDRVSGDIHNIELAGIFVQIGLLPNTN E Y R I E L 0 2 1 2 0 0 1 1 1 2 0 0 0 0 0 1 0 0 1 1 0 0 13 2 0 0 1572.7645 P35340 P35340 429 441 ahpF Alkyl hydroperoxide reductase subunit F yes yes 3;4 0.00030591 49.333 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 1 1 690390000 62416000 66042000 100880000 145920000 30911000 37727000 87311000 159180000 5080 348 5570 30273;30274;30275;30276;30277;30278;30279;30280;30281;30282;30283;30284;30285 22873;22874;22875;22876;22877;22878;22879;22880;22881;22882 22875 8 959000000 1007100000 857180000 1106300000 475900000 571810000 671960000 913510000 YREMDESLANLSE PEGRRTSRRKRAKVEYREMDESLANLSEDE VEYREMDESLANLSEDEYYSEEERNAKAEK E Y R S E D 1 1 1 1 0 0 3 0 0 0 2 0 1 0 0 2 0 0 1 0 0 0 13 1 2 1 1555.6824 LSD1-FL-His LSD1-FL-His 122 134 yes yes 2 2.9225E-08 77.527 By MS/MS By MS/MS By MS/MS 2 2 3 8476700 0 0 0 0 0 0 0 8476700 5081 24 5571;5572;5573 30286;30287;30288;30289;30290;30291;30292 22883;22884;22885;22886;22887;22888 22885 43 9 2 0 0 0 0 0 0 0 48646000 YRGYDSAGLAVVDAE RDVAEILLEGLRRLEYRGYDSAGLAVVDAE YRGYDSAGLAVVDAEGHMTRLRRLGKVQML E Y R A E G 3 1 0 2 0 0 1 2 0 0 1 0 0 0 0 1 0 0 2 2 0 0 15 1 0 3 1584.742 P17169 P17169 26 40 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] yes yes 2 4.2691E-24 160.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 3300200000 237690000 298660000 533720000 623180000 205910000 168450000 505230000 727320000 5082 288 5574 30293;30294;30295;30296;30297;30298;30299;30300 22889;22890;22891;22892;22893;22894;22895;22896;22897;22898;22899 22891 11 3652100000 4554600000 4534900000 4724600000 3170100000 2553100000 3888400000 4174000000 YRHGISNLK DLDVTATNRETLEQRYRHGISNLKLKHANH ETLEQRYRHGISNLKLKHANHK________ R Y R L K L 0 1 1 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 1 0 0 0 9 1 0 0 1086.5934 P61517 P61517 205 213 can Carbonic anhydrase 2 yes yes 3 0.010066 45.368 By MS/MS By MS/MS 1 1 46773000 21634000 25138000 0 0 0 0 0 0 5083 386 5575 30301;30302 22900 22900 0 21634000 25732000 0 0 0 0 0 0 YRPLTEEE RIGGITLDADLAPGEYRPLTEEEIASVV__ ADLAPGEYRPLTEEEIASVV__________ E Y R E E I 0 1 0 0 0 0 3 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 8 1 2 1 1035.4873 P0AA43 P0AA43 219 226 rsuA Ribosomal small subunit pseudouridine synthase A yes yes 2 4.5341E-11 130.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 1237500000 90808000 99223000 257190000 209490000 39339000 44005000 216980000 280470000 5084 183 5576 30303;30304;30305;30306;30307;30308;30309;30310 22901;22902;22903;22904 22904 4 1395200000 1513200000 2185300000 1588300000 605660000 666960000 1669900000 1609600000 YRYAHDE NAPTKLMKEMGYGQEYRYAHDEANAYAAGE KEMGYGQEYRYAHDEANAYAAGEVYFPPEI E Y R D E A 1 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 7 1 0 1 952.40389 P0AAZ4 P0AAZ4 389 395 rarA Replication-associated recombination protein A yes yes 2;3 0.010082 76.847 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 50635000 0 0 11983000 9636100 0 0 12948000 16069000 5085 189 5577 30311;30312;30313;30314;30315;30316;30317;30318 22905;22906;22907;22908 22908 4 0 0 101820000 73056000 0 0 99648000 92217000 YSANNYVK KQIRPLSDEEKAGLRYSANNYVKWKDEYLD EEKAGLRYSANNYVKWKDEYLDQGNQTQP_ R Y S V K W 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 2 1 0 0 8 0 0 1 957.4556 P0A9W9 P0A9W9 163 170 yrdA Protein YrdA yes yes 2 1.6183E-47 149.4 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 249280000 61692000 83541000 0 0 50862000 53187000 0 0 5086 179 5578 30319;30320;30321;30322 22909;22910;22911;22912 22909 3 61692000 85513000 0 0 61355000 58919000 0 0 YSDGSANNLTHK GVINFAYYLAKHGKRYSDGSANNLTHKTFE GKRYSDGSANNLTHKTFEAIQYYLLKASNE R Y S H K T 1 0 2 1 0 0 0 1 1 0 1 1 0 0 0 2 1 0 1 0 0 0 12 0 0 1 1305.5949 P00452;P00452-2 P00452 531 542 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha yes no 2;3 2.1008E-05 78.655 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 23461000 7869300 7528300 0 0 4098300 3965500 0 0 5087 26 5579 30323;30324;30325;30326;30327;30328;30329;30330 22913;22914;22915;22916;22917;22918 22914 6 7869300 7706000 0 0 4943800 4392900 0 0 YSDHIALPVEIEK DEFLDDWRVRSIISKYSDHIALPVEIEKRE SKYSDHIALPVEIEKREEKDGETVISWEKI K Y S E K R 1 0 0 1 0 0 2 0 1 2 1 1 0 0 1 1 0 0 1 1 0 0 13 0 2 2 1512.7824 P0A6Z3 P0A6Z3 200 212 htpG Chaperone protein HtpG yes yes 2;3 2.447E-15 124.42 By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 196600000 48265000 47713000 0 0 47699000 52921000 0 0 5088 88 5580 30331;30332;30333;30334;30335;30336;30337;30338;30339 22919;22920;22921;22922;22923;22924;22925;22926 22919 8 86436000 90781000 0 0 57540000 58625000 0 0 YSDHIALPVEIEKR DEFLDDWRVRSIISKYSDHIALPVEIEKRE KYSDHIALPVEIEKREEKDGETVISWEKIN K Y S K R E 1 1 0 1 0 0 2 0 1 2 1 1 0 0 1 1 0 0 1 1 0 0 14 1 2 2 1668.8835 P0A6Z3 P0A6Z3 200 213 htpG Chaperone protein HtpG yes yes 3;4 1.2643E-11 96.591 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 124950000 61451000 44110000 0 0 8768000 10617000 0 0 5089 88 5581 30340;30341;30342;30343;30344;30345;30346;30347;30348;30349 22927;22928;22929;22930 22930 4 61451000 45151000 0 0 11526000 13553000 0 0 YSEDHAQIK RYAALQQSSLFRGMRYSEDHAQIKEWAPLV LFRGMRYSEDHAQIKEWAPLVMEGRDPQQK R Y S I K E 1 0 0 1 0 1 1 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1 1 1089.5091 P33940 P33940 171 179 mqo Malate:quinone oxidoreductase yes yes 2 0.0015147 71.379 By MS/MS By MS/MS By MS/MS 1 1 1 2131600 0 2131600 0 0 0 0 0 0 5090 346 5582 30350;30351;30352 22931;22932;22933;22934 22934 4 0 2181900 0 0 0 0 0 0 YSIGQPFVYPR RLLSKMPTMAAMCYKYSIGQPFVYPRNDLS MCYKYSIGQPFVYPRNDLSYAGNFLNMMFS K Y S P R N 0 1 0 0 0 1 0 1 0 1 0 0 0 1 2 1 0 0 2 1 0 0 11 0 0 2 1325.6768 P0ABH7 P0ABH7 179 189 gltA Citrate synthase yes yes 2 1.9372E-05 101.64 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 35358000 9847200 7762300 0 0 6400800 11348000 0 0 5091 200 5583 30353;30354;30355;30356 22935;22936;22937;22938 22937 4 9847200 7945500 0 0 7721300 12571000 0 0 YSQQILALVDEAR NQRLRLSPAGHNFLRYSQQILALVDEARSV LRYSQQILALVDEARSVVAGDEPQGLFSLG R Y S A R S 2 1 0 1 0 2 1 0 0 1 2 0 0 0 0 1 0 0 1 1 0 0 13 0 1 2 1504.7886 P77309 P77309 67 79 yneJ Uncharacterized HTH-type transcriptional regulator YneJ yes yes 2 2.0586E-05 57.836 By MS/MS 1 0 0 0 0 0 0 0 0 0 5092 430 5584 30357 22939 22939 1 0 0 0 0 0 0 0 0 YSSTISDPDTNVK QTREYFRRLAKDASRYSSTISDPDTNVKQV SRYSSTISDPDTNVKQVKVLQLINAYRFRG R Y S V K Q 0 0 1 2 0 0 0 0 0 1 0 1 0 0 1 3 2 0 1 1 0 0 13 0 0 1 1425.6624 P0AFG3 P0AFG3 76 88 sucA 2-oxoglutarate dehydrogenase E1 component yes yes 2 5.2359E-46 192.12 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 237030000 71263000 53953000 0 0 51220000 60593000 0 0 5093 246 5585 30358;30359;30360;30361 22940;22941;22942;22943 22941 4 71263000 55226000 0 0 61787000 67124000 0 0 YSYVDENGETK VKSGTKAKRAQRPAKYSYVDENGETKTWTG RPAKYSYVDENGETKTWTGQGRTPAVIKKA K Y S T K T 0 0 1 1 0 0 2 1 0 0 0 1 0 0 0 1 1 0 2 1 0 0 11 0 2 0 1303.5568 P0ACF8 P0ACF8 97 107 hns DNA-binding protein H-NS yes yes 2 1.207E-202 238.51 By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 689530000 238670000 239150000 0 0 113690000 98029000 0 0 5094 210 5586 30362;30363;30364;30365 22944;22945;22946 22944 2 238670000 244790000 0 0 137140000 108590000 0 0 YTAAITGAEGK VHPDQSEQVPGMIERYTAAITGAEGKIHRL MIERYTAAITGAEGKIHRLEDWGRRQLAYP R Y T G K I 3 0 0 0 0 0 1 2 0 1 0 1 0 0 0 0 2 0 1 0 0 0 11 0 1 3 1080.5451 P02358 P02358 25 35 rpsF 30S ribosomal protein S6;30S ribosomal protein S6, fully modified isoform;30S ribosomal protein S6, non-modified isoform yes yes 2 0.00010631 88.681 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 79790000 25599000 23081000 0 0 14851000 16259000 0 0 5095 35 5587 30366;30367;30368;30369;30370 22947;22948;22949;22950 22948 4 25599000 23625000 0 0 17915000 18277000 0 0 YTASGCEVIAVNTR EGLDIKLNTAVRQVRYTASGCEVIAVNTRS RYTASGCEVIAVNTRSTSQTFIYKCDAVLC R Y T T R S 2 1 1 0 1 0 1 1 0 1 0 0 0 0 0 1 2 0 1 2 0 0 14 0 1 2 1539.7351 LSD1-FL-His LSD1-FL-His 597 610 yes yes 2;3 3.3418E-190 274.2 By MS/MS By MS/MS By MS/MS By MS/MS 2 4 2 1 1335600000 378120000 296590000 0 0 296660000 364210000 0 0 5096 24 5588 30371;30372;30373;30374;30375;30376;30377;30378;30379 22951;22952;22953;22954;22955;22956;22957;22958;22959;22960 22957 9 444330000 317290000 0 0 391130000 403470000 0 0 YTEADQYGTTVIAGEDAQK WELLCLYCHDHEHSKYTEADQYGTTVIAGE DQYGTTVIAGEDAQKDVGEAKYNPFADLKA K Y T Q K D 3 0 0 2 0 2 2 2 0 1 0 1 0 0 0 0 3 0 2 1 0 0 19 0 2 3 2058.9382 P0AAQ2 P0AAQ2 76 94 yajD Uncharacterized protein YajD yes yes 2;3 1.6162E-164 257.91 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 224510000 70675000 58365000 0 0 45648000 49818000 0 0 5097 188 5589 30380;30381;30382;30383;30384;30385;30386;30387 22961;22962;22963;22964;22965 22963 5 70675000 59742000 0 0 55065000 55188000 0 0 YTEADQYGTTVIAGEDAQKDVGEAK WELLCLYCHDHEHSKYTEADQYGTTVIAGE VIAGEDAQKDVGEAKYNPFADLKAMMNKKK K Y T A K Y 4 0 0 3 0 2 3 3 0 1 0 2 0 0 0 0 3 0 2 2 0 0 25 1 3 4 2658.2297 P0AAQ2 P0AAQ2 76 100 yajD Uncharacterized protein YajD yes yes 3 8.3165E-24 95.926 By MS/MS By MS/MS 1 1 30566000 17742000 12823000 0 0 0 0 0 0 5098 188 5590 30388;30389 22966;22967 22967 2 17742000 13126000 0 0 0 0 0 0 YTLAGTEVSALLGR DEGRDVLLFVDNIYRYTLAGTEVSALLGRM RYTLAGTEVSALLGRMPSAVGYQPTLAEEM R Y T G R M 2 1 0 0 0 0 1 2 0 0 3 0 0 0 0 1 2 0 1 1 0 0 14 0 1 2 1449.7827 P0ABB4 P0ABB4 248 261 atpD ATP synthase subunit beta yes yes 2 1.9822E-18 151.15 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32613000 7019900 5952700 0 0 11142000 8498000 0 0 5099 194 5591 30390;30391;30392;30393 22968;22969;22970;22971 22970 4 7019900 6093200 0 0 13441000 9413800 0 0 YTLPVLILTAR DEDGLHFLARIRQKKYTLPVLILTARDTLT RQKKYTLPVLILTARDTLTDKIAGLDVGAD K Y T A R D 1 1 0 0 0 0 0 0 0 1 3 0 0 0 1 0 2 0 1 1 0 0 11 0 0 2 1258.7649 P30843 P30843 71 81 basR Transcriptional regulatory protein BasR yes yes 2 1.8399E-07 91.584 By MS/MS By MS/MS By matching 1 1 1 42089000 15929000 13871000 0 0 0 12289000 0 0 5100 333 5592 30394;30395;30396 22972;22973 22972 1 15929000 14198000 0 0 0 13613000 0 0 YTPAPASGSR NHFAEPAAREPVAPRYTPAPASGSRPAAPW PVAPRYTPAPASGSRPAAPWPNAQPGYQKQ R Y T S R P 2 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 1 0 1 0 0 0 10 0 0 4 1005.488 P23367 P23367 376 385 mutL DNA mismatch repair protein MutL yes yes 2 0.0050261 43.442 By MS/MS By MS/MS 1 1 14785000 14785000 0 0 0 0 0 0 0 5101 302 5593 30397;30398 22974;22975 22975 2 14785000 0 0 0 0 0 0 0 YTQDGETLVGQPAKRQA LENAEGDRTTPSIIAYTQDGETLVGQPAKR QDGETLVGQPAKRQAVTNPQNTLFAIKRLI A Y T Q A V 2 1 0 1 0 3 1 2 0 0 1 1 0 0 1 0 2 0 1 1 0 0 17 2 1 2 1860.933 P0A6Y8 P0A6Y8 42 58 dnaK Chaperone protein DnaK yes yes 2;3 7.1613E-36 121.79 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 159330000 14382000 15495000 0 0 93314000 36136000 0 0 5102 86 5594 30399;30400;30401;30402;30403;30404;30405;30406 22976;22977;22978;22979;22980;22981 22979 6 86819000 92736000 0 0 132850000 51511000 0 0 YTQLIER RRKLLDYLKRKDVARYTQLIERLGLRR___ LKRKDVARYTQLIERLGLRR__________ R Y T E R L 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 7 0 1 0 921.49198 P0ADZ4 P0ADZ4 78 84 rpsO 30S ribosomal protein S15 yes yes 2 4.7636E-45 166.05 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 8106600000 2331300000 2231000000 0 0 1860500000 1683800000 0 0 5103 231 5595 30407;30408;30409;30410 22982;22983;22984;22985 22983 4 2331300000 2283700000 0 0 2244300000 1865300000 0 0 YTRNPLRVFE CDVVLPLVAIATPIEYTRNPLRVFELDFEE ATPIEYTRNPLRVFELDFEENLRIIRYCVK E Y T F E L 0 2 1 0 0 0 1 0 0 0 1 0 0 1 1 0 1 0 1 1 0 0 10 2 0 1 1293.683 P77398 P77398 398 407 arnA Bifunctional polymyxin resistance protein ArnA;UDP-4-amino-4-deoxy-L-arabinose formyltransferase;UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating yes yes 3 0.018752 40.589 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 1 1 70696000 5828900 5932400 9953500 8371400 4642100 4345900 12635000 18987000 5104 432 5596 30411;30412;30413;30414;30415;30416;30417;30418 22986;22987 22986 2 89560000 90469000 84574000 63468000 71469000 65869000 97244000 108960000 YVHQLDNNASVMR AHSVKLRPLEREDLRYVHQLDNNASVMRYW LRYVHQLDNNASVMRYWFEEPYEAFVELSD R Y V M R Y 1 1 2 1 0 1 0 0 1 0 1 0 1 0 0 1 0 0 1 2 0 0 13 0 0 1 1545.7358 P0A951 P0A951 19 31 speG Spermidine N(1)-acetyltransferase yes yes 2;3 2.2528E-71 154.94 By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 495200000 168230000 129710000 0 0 97763000 99491000 0 0 5105 160 5597;5598 30419;30420;30421;30422;30423;30424;30425;30426;30427;30428;30429;30430 22988;22989;22990;22991;22992;22993;22994;22995;22996;22997;22998;22999 22992 153 12 168230000 132770000 0 0 117930000 110210000 0 0 YVILPLVNR AVNPEDPRYKDLIGKYVILPLVNRRIPIVG KDLIGKYVILPLVNRRIPIVGDEHADMEKG K Y V N R R 0 1 1 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 1 2 0 0 9 0 0 1 1085.6597 P07118 P07118 249 257 valS Valine--tRNA ligase yes yes 2 0.010624 59.205 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 9712800 2139000 2674700 0 0 2071000 2828100 0 0 5106 57 5599 30431;30432;30433;30434 23000;23001;23002 23001 3 2139000 2737800 0 0 2498300 3132900 0 0 YVRPDVSHFEAK SDEFQPLLNTEGPVKYVRPDVSHFEAKKLR PVKYVRPDVSHFEAKKLRRGDYSPELFLDL K Y V A K K 1 1 0 1 0 0 1 0 1 0 0 1 0 1 1 1 0 0 1 2 0 0 12 1 1 2 1446.7256 P0A8B2 P0A8B2 74 85 yfcN UPF0115 protein YfcN yes yes 3 2.8585E-18 102.9 By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 0 0 5107 142 5600 30435;30436 23003;23004 23003 2 0 0 0 0 0 0 0 0 YVVHNVAHR FNTMTKKADEIQIYKYVVHNVAHRFGKTAT EIQIYKYVVHNVAHRFGKTATFMPKPMFGD K Y V H R F 1 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 3 0 0 9 0 0 1 1093.5781 P0A9C5 P0A9C5 241 249 glnA Glutamine synthetase yes yes 2;3 0.0036665 47.067 By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 26711000 10257000 7027300 0 0 4845200 4582300 0 0 5108 164 5601 30437;30438;30439;30440;30441;30442;30443 23005;23006;23007;23008;23009;23010 23007 6 10257000 7193100 0 0 5844800 5076200 0 0 YVVITSVDRDDLR EPVKLAQTIADMALRYVVITSVDRDDLRDG LRYVVITSVDRDDLRDGGAQHFADCITAIR R Y V L R D 0 2 0 3 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 3 0 0 13 1 0 0 1549.81 P60716 P60716 130 142 lipA Lipoyl synthase yes yes 3 0.001334 55.314 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 64794000 20323000 16340000 0 0 15265000 12866000 0 0 5109 382 5602 30444;30445;30446;30447 23011;23012;23013;23014 23014 4 20323000 16726000 0 0 18414000 14252000 0 0 YVVVPGWSDDDDSAHR FAKYLANKNVKVWIRYVVVPGWSDDDDSAH VVVPGWSDDDDSAHRLGEFTRDMGNVEKIE R Y V H R L 1 1 0 4 0 0 0 1 1 0 0 0 0 0 1 2 0 1 1 3 0 0 16 0 0 2 1816.8016 P0A9N4 P0A9N4 168 183 pflA Pyruvate formate-lyase 1-activating enzyme yes yes 2;3 1.546E-23 112.17 By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 180850000 49696000 62436000 0 0 28537000 40182000 0 0 5110 171 5603 30448;30449;30450;30451;30452;30453;30454;30455 23015;23016;23017;23018;23019;23020;23021;23022 23021 8 49696000 63910000 0 0 34424000 44513000 0 0 YYFPTNR AAGEVYFPPEIAQTRYYFPTNRGLEGKIGE PPEIAQTRYYFPTNRGLEGKIGEKLAWLAE R Y Y N R G 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 2 0 0 0 7 0 0 1 959.45012 P0AAZ4 P0AAZ4 415 421 rarA Replication-associated recombination protein A yes yes 2 0.0026503 86.086 By matching By MS/MS By matching By MS/MS 1 1 1 1 34723000 12490000 7526300 0 0 6809100 7897800 0 0 5111 189 5604 30456;30457;30458;30459 23023;23024 23024 2 12490000 7703900 0 0 8213800 8749000 0 0 YYIDGDVKLTQSMA RNKKFELGLEFPNLPYYIDGDVKLTQSMAI PYYIDGDVKLTQSMAIIRYIADKHNMLGGC P Y Y M A I 1 0 0 2 0 1 0 1 0 1 1 1 1 0 0 1 1 0 2 1 0 0 14 1 0 0 1602.76 GST-Nek6 GST-Nek6 57 70 yes yes 2 0.001772 58.223 By MS/MS By MS/MS 2 2 29977000 0 0 0 0 15872000 14105000 0 0 5112 23 5605;5606 30460;30461;30462;30463 23025;23026 23026 35 1 0 0 0 0 22596000 20107000 0 0 YYKDGAEILIDR YPNNPQSVTRTLSARYYKDGAEILIDRGWD SARYYKDGAEILIDRGWDMATGEKDFDDPL R Y Y D R G 1 1 0 2 0 0 1 1 0 2 1 1 0 0 0 0 0 0 2 0 0 0 12 1 1 1 1454.7405 P0AED9 P0AED9 367 378 dcm DNA-cytosine methyltransferase yes yes 2;3 1.1721E-09 115.18 By MS/MS By MS/MS By MS/MS By MS/MS 4 3 1 3 127260000 64386000 44314000 0 0 3073600 15490000 0 0 5113 235 5607 30464;30465;30466;30467;30468;30469;30470;30471;30472;30473;30474 23027;23028;23029;23030;23031 23028 4 113350000 47859000 0 0 4375800 58839000 0 0 YYPAEDAK PMLNLTRRKGQDIERYYPAEDAKAGDRPIN KGQDIERYYPAEDAKAGDRPINLRCELLIP R Y Y A K A 2 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 0 8 0 1 3 955.42871 P0ACI0 P0ACI0 264 271 rob Right origin-binding protein yes yes 2 0.0020507 87.323 By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 127780000 41693000 37724000 0 0 22625000 25738000 0 0 5114 211 5608 30475;30476;30477;30478 23032;23033;23034;23035 23034 4 41693000 38614000 0 0 27293000 28512000 0 0