Raw file Experiment Enzyme Enzyme mode Enzyme first search Enzyme mode first search Use enzyme first search Variable modifications Fixed modifications Multi modifications Variable modifications first search Use variable modifications first search Requantify Multiplicity Max. missed cleavages Labels0 LC-MS run type Time-dependent recalibration MS MS/MS MS3 MS/MS submitted MS/MS submitted (SIL) MS/MS submitted (ISO) MS/MS submitted (PEAK) MS/MS identified MS/MS identified (SIL) MS/MS identified (ISO) MS/MS identified (PEAK) MS/MS identified [%] MS/MS identified (SIL) [%] MS/MS identified (ISO) [%] MS/MS identified (PEAK) [%] Peptide sequences identified Peaks Peaks sequenced Peaks sequenced [%] Peaks repeatedly sequenced Peaks repeatedly sequenced [%] Isotope patterns Isotope patterns sequenced Isotope patterns sequenced (z>1) Isotope patterns sequenced [%] Isotope patterns sequenced (z>1) [%] Isotope patterns repeatedly sequenced Isotope patterns repeatedly sequenced [%] Recalibrated Av. absolute mass deviation [ppm] Mass standard deviation [ppm] Av. absolute mass deviation [mDa] Mass standard deviation [mDa] Label free norm param 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP833 ARC_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14915 50294 0 63698 36890 0 26808 21755 20172 0 1583 34 55 0 5.9 15138 1151281 43462 3.8 3184 7.3 103053 31211 30407 30 38 5125 16 + 0.87185 1.1216 0.55809 0.74737 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP834_C18 ARC_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14633 53265 0 67420 39110 0 28310 23118 21031 0 2087 34 54 0 7.4 15797 1187519 46290 3.9 3196 6.9 113203 33353 32511 29 35 5248 16 + 1.1804 1.3894 0.74356 0.89809 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP832_C18 ARC_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14350 54228 0 67781 40675 0 27106 24998 22978 0 2020 37 56 0 7.5 16560 1130280 47420 4.2 3270 6.9 111709 34658 33911 31 36 5423 16 + 0.87584 1.1302 0.5579 0.75233 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP858_C18 seedling_4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14579 53439 0 69386 37492 0 31894 22566 20008 0 2558 33 53 0 8 16049 1245365 45085 3.6 3537 7.8 110672 31307 30288 28 34 5454 17 + 1.2868 1.4995 0.82375 0.98378 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP843_C18 WTseedling_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 17413 42380 0 55949 28811 0 27138 17613 15630 0 1983 31 54 0 7.3 12762 1264011 35403 2.8 3305 9.3 95201 23390 22634 25 32 4793 20 + 1.0686 1.2887 0.6575 0.81146 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP831 WTARC_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14388 51432 0 64532 38332 0 26200 22936 21307 0 1629 36 56 0 6.2 17111 1162374 44968 3.9 3015 6.7 106841 32945 32113 31 38 4949 15 + 0.99827 1.2313 0.64618 0.82562 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP837_C18 WTseedling_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14699 52086 0 67964 36208 0 31756 21586 19222 0 2364 32 53 0 7.4 15717 1251363 44286 3.5 3127 7.1 111026 30659 29561 28 35 4937 16 + 1.0262 1.2706 0.65225 0.8349 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP829_C18 WTARC_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 15859 46998 0 59692 34304 0 25388 20719 19133 0 1586 35 56 0 6.2 15303 1186613 40458 3.4 3268 8.1 101638 28861 28178 28 35 4992 17 + 0.88822 1.1303 0.54008 0.70974 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP834 ARC_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 15110 50216 0 63841 36591 0 27250 21395 19559 0 1836 34 53 0 6.7 14925 1178747 43215 3.7 3238 7.5 103074 30874 29972 30 37 5128 17 + 1.0121 1.2382 0.64442 0.81411 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP849_C18 seedling_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14935 52143 0 67268 37018 0 30250 20766 18741 0 2025 31 51 0 6.7 14499 1232451 44347 3.6 3510 7.9 107665 30788 29788 29 35 5524 18 + 0.87939 1.1427 0.54691 0.73777 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP855_C18 seedling_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14434 53585 0 69588 37582 0 32006 23162 20626 0 2536 33 55 0 7.9 16457 1232442 45509 3.7 3419 7.5 111795 31509 30517 28 34 5391 17 + 0.82169 1.099 0.53965 0.7608 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP846_C18 WTseedling_4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14804 52141 0 68323 35959 0 32364 22018 19503 0 2515 32 54 0 7.8 15903 1263069 44239 3.5 3198 7.2 110937 30270 29202 27 34 5058 17 + 0.79258 1.0793 0.51653 0.73454 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP830_C18 WTARC_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14794 52398 0 67426 37370 0 30056 22319 20094 0 2225 33 54 0 7.4 15790 1239583 44910 3.6 3369 7.5 111047 31586 30434 28 35 5241 17 + 0.80384 1.0775 0.51332 0.71922 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP833_C18 ARC_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14343 54154 0 68466 39842 0 28624 24589 22447 0 2142 36 56 0 7.5 16879 1168654 47081 4 3184 6.8 114488 34193 33377 30 35 5157 15 + 0.938 1.1857 0.59003 0.77518 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP830 WTARC_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 16165 45647 0 59234 32060 0 27174 18857 17409 0 1448 32 54 0 5.3 14007 1189111 39151 3.3 2696 6.9 96408 27245 26357 28 38 4399 16 + 0.69507 0.97397 0.45474 0.6641 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP829 WTARC_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14148 52461 0 66298 38624 0 27674 23951 22070 0 1881 36 57 0 6.8 17679 1146397 45937 4 2891 6.3 106292 33303 32382 31 39 4888 15 + 0.96214 1.2017 0.6218 0.80357 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP852_C18 seedling_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14358 54219 0 69614 38824 0 30790 23349 20897 0 2452 34 54 0 8 16363 1227704 46459 3.8 3370 7.3 111822 32566 31610 29 34 5564 17 + 1.2503 1.4625 0.79429 0.94968 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP840_C18 WTseedling_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14577 53287 0 69085 37489 0 31596 22652 20231 0 2421 33 54 0 7.7 16421 1237694 45540 3.7 3171 7 111954 31762 30652 28 35 5111 16 + 0.91872 1.1788 0.5866 0.78258 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP831_C18 WTARC_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14263 53991 0 67323 40659 0 26664 25332 23263 0 2069 38 57 0 7.8 18480 1213786 47520 3.9 3107 6.5 118316 35041 34119 30 35 5210 15 + 0.98077 1.2283 0.619 0.80157 210202_C21_001_QHF1_Standard_Rev02_#21_005_PAP832 ARC_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 14226 53362 0 67036 39688 0 27348 23395 21585 0 1810 35 54 0 6.6 15793 1097190 46235 4.2 3332 7.2 104078 33668 32839 32 38 5394 16 + 0.95712 1.1956 0.61886 0.80384 190717_C19_014_QHF2_Standrad_Rev02_#19_029_PAP288 grad_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12517 57521 0 69103 45939 0 23164 26452 24882 0 1570 38 54 0 6.8 19812 947350 52869 5.6 1901 3.6 108838 41601 40947 38 42 4021 9.7 + 0.71909 0.97583 0.49512 0.71453 190717_C19_014_QHF2_Standrad_Rev02_#19_029_PAP289 grad_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12908 58321 0 69751 46891 0 22860 29032 27148 0 1884 42 58 0 8.2 21472 966679 53406 5.5 2234 4.2 108728 42078 41376 39 43 4453 11 + 0.84112 1.0775 0.57473 0.78526 190717_C19_014_QHF2_Standrad_Rev02_#19_029_PAP290 grad_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12873 57702 0 69176 46228 0 22948 27892 26069 0 1823 40 56 0 7.9 20595 949357 52845 5.6 2200 4.2 106776 41482 40772 39 43 4385 11 + 0.68037 0.94942 0.46947 0.69727 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_245 pCAB3_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6635 131469 0 180526 82412 0 98114 18592 17646 0 946 10 21 0 0.96 11220 1041358 102885 9.9 14104 14 124076 52445 45114 42 49 16279 31 + 0.84849 1.0954 0.60804 0.8454 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_246 pCAB3_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6864 129956 0 169793 90119 0 79674 37365 34736 0 2629 22 39 0 3.3 25245 859204 111482 13 8791 7.9 115124 66493 63797 58 63 16887 25 + 0.63231 0.87645 0.48718 0.72651 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_247 pCAB3_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6744 130955 0 176453 85457 0 90996 39232 36162 0 3070 22 42 0 3.4 25158 790383 106950 14 9626 9 104845 60344 58241 58 63 16624 28 + 0.62655 0.86464 0.48931 0.72335 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_248 pCAB3_4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6701 131389 0 176984 85794 0 91190 37731 34667 0 3064 21 40 0 3.4 24135 783429 107648 14 9662 9 103413 60280 58115 58 64 16850 28 + 0.58293 0.82208 0.45468 0.68607 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_249 pMYB60_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6923 129403 0 174485 84321 0 90164 36045 33142 0 2903 21 39 0 3.2 23770 790837 106049 13 9332 8.8 104793 60080 57771 57 63 16307 27 + 0.64314 0.88277 0.50138 0.74243 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_250 pMYB60_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6755 130909 0 176585 85233 0 91352 39641 36286 0 3355 22 43 0 3.7 25288 782598 107674 14 9401 8.7 103503 60633 58402 59 64 16769 28 + 0.59467 0.82652 0.45649 0.68047 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_251 pMYB60_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 7005 128528 0 176035 81021 0 95014 28992 26872 0 2120 16 33 0 2.2 19072 774146 102740 13 9466 9.2 100813 56969 54729 57 62 15707 28 + 0.63787 0.87256 0.48482 0.71758 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_252 pMYB60_4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 7053 128182 0 173771 82593 0 91178 29559 27274 0 2285 17 33 0 2.5 19548 788664 104149 13 9318 8.9 104585 58628 56362 56 61 15648 27 + 0.6491 0.8907 0.50014 0.74073 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_253 pMYB60_5 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 7181 126798 0 176544 77052 0 99492 20906 18992 0 1914 12 25 0 1.9 12352 780419 100197 13 10844 11 92395 51260 48153 55 62 15710 31 + 0.76017 0.9979 0.57353 0.81132 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_254 p35S_1 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6913 129499 0 172767 86231 0 86536 34526 31908 0 2618 20 37 0 3 21357 781267 107092 14 10302 9.6 100495 59494 56703 59 66 17824 30 + 0.60492 0.82434 0.43181 0.62652 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_255 p35S_2 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 12329 80745 0 143119 18361 0 124758 1707 1657 0 50 1.2 9 0 0.04 680 517078 49140 9.5 5532 11 30358 11243 9248 37 44 3869 34 + 0.6396 0.82398 0.59134 0.81399 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_256 p35S_3 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6751 130779 0 181943 79615 0 102328 27247 24888 0 2359 15 31 0 2.3 11910 821446 100117 12 13550 14 94215 47725 43725 51 56 16783 35 + 0.597 0.84605 0.4287 0.64975 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_257 p35S_4 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6673 131604 0 179374 83834 0 95540 35776 32938 0 2838 20 39 0 3 20467 729621 106571 15 10425 9.8 93768 56309 53667 60 66 17578 31 + 0.54731 0.7684 0.41697 0.63161 210811_C21_022_OE480_Thermo_Rev00_#21_043_RGH_PAP21_258 p35S_5 Trypsin/P Specific False Oxidation (M);Acetyl (Protein N-term) Carbamidomethyl (C) True False 1 2 Standard 6809 130408 0 179426 81390 0 98036 27099 24791 0 2308 15 30 0 2.4 14288 779623 104322 13 11785 11 94265 52771 48557 56 63 17329 33 + 0.63586 0.85197 0.43505 0.61649 Total 436627 2975894 0 3965759 1986019 0 1979740 944870 865964 0 78906 24 44 0 4 70619 37889093 3852209 1509024 1446531 39 46 336009 22 0.80851 1.0678 0.54845 0.75712