<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="pepXML_std.xsl"?>
<msms_pipeline_analysis date="2025-01-13T14:28:48" xmlns="http://regis-web.systemsbiology.net/pepXML" summary_xml="D:\Personal\Tomioka\data\20250113_typeXIII_modification\rawdata_02\240825RT_trypsin_37C_16hours_03.pepXML" xsi:schemaLocation="http://sashimi.sourceforge.net/schema_revision/pepXML/pepXML_v122.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<analysis_summary analysis="Percolator" time="2025-01-13T14:31:50">
<peptideprophet_summary min_prob="0.50">
<inputfile name="D:\Personal\Tomioka\data\20250113_typeXIII_modification\20250113_MSFragger_02_Nterm\240825RT_trypsin_37C_16hours_03\240825RT_trypsin_37C_16hours_03.pepXML"/>
</peptideprophet_summary>
</analysis_summary>
<analysis_summary analysis="database_refresh" time="2025-01-13T14:31:50"/>
<analysis_summary analysis="interact" time="2025-01-13T14:31:50">
<interact_summary filename="D:\Personal\Tomioka\data\20250113_typeXIII_modification\20250113_MSFragger_02_Nterm\240825RT_trypsin_37C_16hours_03\interact-240825RT_trypsin_37C_16hours_03.pep.xml" directory="">
<inputfile name="D:\Personal\Tomioka\data\20250113_typeXIII_modification\20250113_MSFragger_02_Nterm\240825RT_trypsin_37C_16hours_03\240825RT_trypsin_37C_16hours_03.pepXML"/>
</interact_summary>
</analysis_summary>
<dataset_derivation generation_no="0"/>
<msms_run_summary base_name="D:\Personal\Tomioka\data\20250113_typeXIII_modification\rawdata_02\240825RT_trypsin_37C_16hours_03_uncalibrated" raw_data_type="mzML" comment="This pepXML was from calibrated spectra." raw_data="mzML">
<sample_enzyme name="stricttrypsin">
<specificity cut="KR" no_cut="" sense="C"/>
</sample_enzyme>
<search_summary base_name="D:\Personal\Tomioka\data\20250113_typeXIII_modification\rawdata_02\240825RT_trypsin_37C_16hours_03" precursor_mass_type="monoisotopic" search_engine="X! Tandem" search_engine_version="MSFragger-4.1" fragment_mass_type="monoisotopic" search_id="1">
<search_database local_path="\\mcbapublic5\share\mcbapublic5_share\share\Personal\Tomioka\4.FASTA\2024-04-05-decoys-contam-SwissProt_Human_20230922_TrypsinPig_TypeXIII.fasta.fas" type="AA"/>
<enzymatic_search_constraint enzyme="default" min_number_termini="0" max_num_internal_cleavages="2"/>
<aminoacid_modification aminoacid="C" massdiff="57.02146" mass="160.03065" variable="N"/>
<aminoacid_modification aminoacid="M" massdiff="15.9949" mass="147.0354" variable="Y"/>
<terminal_modification massdiff="42.0106" protein_terminus="Y" mass="43.018425" terminus="N" variable="Y"/>
<aminoacid_modification aminoacid="C" massdiff="-17.0265" mass="143.00415" variable="Y" peptide_terminus="n"/>
<aminoacid_modification aminoacid="N" massdiff="-17.0265" mass="97.01643" variable="Y" peptide_terminus="n"/>
<aminoacid_modification aminoacid="Q" massdiff="-17.0265" mass="111.032074" variable="Y" peptide_terminus="n"/>
<aminoacid_modification aminoacid="D" massdiff="-18.0106" mass="97.01634" variable="Y" peptide_terminus="n"/>
<aminoacid_modification aminoacid="E" massdiff="-18.0106" mass="111.03199" variable="Y" peptide_terminus="n"/>
<parameter name="# MSFragger.build" value="MSFragger-4.1"/>
<parameter name="database_name" value="\\mcbapublic5\share\mcbapublic5_share\share\Personal\Tomioka\4.FASTA\2024-04-05-decoys-contam-SwissProt_Human_20230922_TrypsinPig_TypeXIII.fasta.fas"/>
<parameter name="decoy_prefix" value="rev_"/>
<parameter name="num_threads" value="35"/>
<parameter name="precursor_mass_lower" value="-20.0"/>
<parameter name="precursor_mass_upper" value="20.0"/>
<parameter name="precursor_mass_units" value="1"/>
<parameter name="precursor_true_tolerance" value="20.0"/>
<parameter name="data_type" value="0"/>
<parameter name="precursor_true_units" value="1"/>
<parameter name="fragment_mass_tolerance" value="20.0"/>
<parameter name="fragment_mass_units" value="1"/>
<parameter name="calibrate_mass" value="1"/>
<parameter name="use_all_mods_in_first_search" value="0"/>
<parameter name="write_calibrated_mzml" value="0"/>
<parameter name="write_uncalibrated_mgf" value="0"/>
<parameter name="write_mzbin_all" value="0"/>
<parameter name="isotope_error" value="0/1"/>
<parameter name="mass_offsets" value="0.0"/>
<parameter name="labile_search_mode" value="OFF"/>
<parameter name="restrict_deltamass_to" value="all"/>
<parameter name="precursor_mass_mode" value="SELECTED"/>
<parameter name="intensity_transform" value="0"/>
<parameter name="activation_types" value="all"/>
<parameter name="analyzer_types" value="all"/>
<parameter name="group_variable" value="0"/>
<parameter name="require_precursor" value="0"/>
<parameter name="reuse_dia_fragment_peaks" value="0"/>
<parameter name="remove_precursor_peak" value="1"/>
<parameter name="remove_precursor_range" value="-1.500000,1.500000"/>
<parameter name="localize_delta_mass" value="0"/>
<parameter name="delta_mass_exclude_ranges" value="(-1.5,3.5)"/>
<parameter name="fragment_ion_series" value="b,y"/>
<parameter name="ion_series_definitions" value=""/>
<parameter name="search_enzyme_name" value="stricttrypsin"/>
<parameter name="min_sequence_matches" value="2"/>
<parameter name="check_spectral_files" value="1"/>
<parameter name="search_enzyme_cut_1" value="KR"/>
<parameter name="search_enzyme_nocut_1" value=""/>
<parameter name="num_enzyme_termini" value="0"/>
<parameter name="allowed_missed_cleavage_1" value="2"/>
<parameter name="search_enzyme_sense_1" value="C"/>
<parameter name="clip_nTerm_M" value="1"/>
<parameter name="allow_multiple_variable_mods_on_residue" value="0"/>
<parameter name="max_variable_mods_per_peptide" value="3"/>
<parameter name="max_variable_mods_combinations" value="5000"/>
<parameter name="mass_diff_to_variable_mod" value="0"/>
<parameter name="output_format" value="pepxml_pin"/>
<parameter name="output_report_topN" value="1"/>
<parameter name="output_max_expect" value="50.0"/>
<parameter name="report_alternative_proteins" value="1"/>
<parameter name="override_charge" value="0"/>
<parameter name="precursor_charge" value="1 4"/>
<parameter name="digest_min_length" value="7"/>
<parameter name="digest_max_length" value="25"/>
<parameter name="digest_mass_range" value="500.0 5000.0"/>
<parameter name="max_fragment_charge" value="1"/>
<parameter name="deisotope" value="1"/>
<parameter name="deneutralloss" value="1"/>
<parameter name="track_zero_topN" value="0"/>
<parameter name="zero_bin_accept_expect" value="0.0"/>
<parameter name="zero_bin_mult_expect" value="1.0"/>
<parameter name="minimum_peaks" value="15"/>
<parameter name="use_topN_peaks" value="150"/>
<parameter name="min_fragments_modelling" value="2"/>
<parameter name="min_matched_fragments" value="4"/>
<parameter name="minimum_ratio" value="0.01"/>
<parameter name="clear_mz_range" value="0.0 0.0"/>
<parameter name="excluded_scan_list_file" value=""/>
<parameter name="variable_mod_01" value="15.9949 M 1"/>
<parameter name="variable_mod_02" value="42.0106 [^ 1"/>
<parameter name="variable_mod_04" value="-17.0265 nCnQnN 1"/>
<parameter name="variable_mod_05" value="-18.0106 nEnD 1"/>
<parameter name="add_A_alanine" value="0.0"/>
<parameter name="add_B_user_amino_acid" value="0.0"/>
<parameter name="add_C_cysteine" value="57.02146"/>
<parameter name="add_Cterm_peptide" value="0.0"/>
<parameter name="add_Cterm_protein" value="0.0"/>
<parameter name="add_D_aspartic_acid" value="0.0"/>
<parameter name="add_E_glutamic_acid" value="0.0"/>
<parameter name="add_F_phenylalanine" value="0.0"/>
<parameter name="add_G_glycine" value="0.0"/>
<parameter name="add_H_histidine" value="0.0"/>
<parameter name="add_I_isoleucine" value="0.0"/>
<parameter name="add_J_user_amino_acid" value="0.0"/>
<parameter name="add_K_lysine" value="0.0"/>
<parameter name="add_L_leucine" value="0.0"/>
<parameter name="add_M_methionine" value="0.0"/>
<parameter name="add_N_asparagine" value="0.0"/>
<parameter name="add_Nterm_peptide" value="0.0"/>
<parameter name="add_Nterm_protein" value="0.0"/>
<parameter name="add_O_user_amino_acid" value="0.0"/>
<parameter name="add_P_proline" value="0.0"/>
<parameter name="add_Q_glutamine" value="0.0"/>
<parameter name="add_R_arginine" value="0.0"/>
<parameter name="add_S_serine" value="0.0"/>
<parameter name="add_T_threonine" value="0.0"/>
<parameter name="add_U_user_amino_acid" value="0.0"/>
<parameter name="add_V_valine" value="0.0"/>
<parameter name="add_W_tryptophan" value="0.0"/>
<parameter name="add_X_user_amino_acid" value="0.0"/>
<parameter name="add_Y_tyrosine" value="0.0"/>
<parameter name="add_Z_user_amino_acid" value="0.0"/>
</search_summary>
<spectrum_query start_scan="4839" uncalibrated_precursor_neutral_mass="827.4151" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.04839.04839.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=4839" end_scan="4839" index="1066" precursor_neutral_mass="827.41486" retention_time_sec="269.77002">
<search_result>
<search_hit peptide="HAVSEGTK" massdiff="0.00115966796875" calc_neutral_pep_mass="827.4137" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 2-K1 OS=Homo sapiens OX=9606 GN=H2BK1 PE=3 SV=1" num_tot_proteins="16" tot_num_ions="14" hit_rank="1" num_matched_ions="4" protein="sp|A0A2R8Y619|H2BK1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type F-S OS=Homo sapiens OX=9606 GN=H2BC12L PE=1 SV=2" protein="sp|P57053|H2BFS_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-E OS=Homo sapiens OX=9606 GN=H2BC21 PE=1 SV=3" protein="sp|Q16778|H2B2E_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<search_score name="hyperscore" value="7.25"/>
<search_score name="nextscore" value="0.0"/>
<search_score name="expect" value="1.154782e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.938973" all_ntt_prob="(0.938973,0.938973,0.938973)">
<search_score_summary>
<parameter name="fval" value="0.235752"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="1.401558"/>
<parameter name="isomassd" value="0"/>
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</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="5883" uncalibrated_precursor_neutral_mass="750.39526" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.05883.05883.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=5883" end_scan="5883" index="1332" precursor_neutral_mass="750.3949" retention_time_sec="320.12106">
<search_result>
<search_hit peptide="FITEGGK" massdiff="0.00372314453125" calc_neutral_pep_mass="750.3912" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Phosphatidylinositol 3-kinase C2 domain-containing subunit gamma OS=Homo sapiens OX=9606 GN=PIK3C2G PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="sp|O75747|P3C2G_HUMAN" peptide_prev_aa="Y" is_rejected="0">
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<search_score name="expect" value="1.650061e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.704964" all_ntt_prob="(0.704964,0.704964,0.704964)">
<search_score_summary>
<parameter name="fval" value="-0.166895"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="4.961605"/>
<parameter name="isomassd" value="0"/>
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</peptideprophet_result>
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</search_hit>
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</spectrum_query>
<spectrum_query start_scan="5894" uncalibrated_precursor_neutral_mass="1125.7424" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.05894.05894.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=5894" end_scan="5894" index="1334" precursor_neutral_mass="1125.7461" retention_time_sec="320.8052">
<search_result>
<search_hit peptide="KKQKKKPGGK" massdiff="0.0115966796875" calc_neutral_pep_mass="1125.7345" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="AT-rich interactive domain-containing protein 4A OS=Homo sapiens OX=9606 GN=ARID4A PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="4" protein="rev_sp|P29374|ARI4A_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="1.403622e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.644228" all_ntt_prob="(0.644228,0.644228,0.644228)">
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<parameter name="fval" value="-0.218366"/>
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<parameter name="nmc" value="0"/>
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<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="11710" uncalibrated_precursor_neutral_mass="1166.6912" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.11710.11710.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=11710" end_scan="11710" index="3578" precursor_neutral_mass="1166.6904" retention_time_sec="591.7824">
<search_result>
<search_hit peptide="KRPAVTVPGGGK" massdiff="0.9974365234375" calc_neutral_pep_mass="1165.693" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Mucin-2 OS=Homo sapiens OX=9606 GN=MUC2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="4" protein="sp|Q02817|MUC2_HUMAN" peptide_prev_aa="T" is_rejected="0">
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<search_score name="nextscore" value="0.0"/>
<search_score name="expect" value="1.584893e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.537323" all_ntt_prob="(0.537323,0.537323,0.537323)">
<search_score_summary>
<parameter name="fval" value="-0.298810"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-5.077078"/>
<parameter name="isomassd" value="1"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="13247" uncalibrated_precursor_neutral_mass="865.4408" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.13247.13247.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=13247" end_scan="13247" index="4285" precursor_neutral_mass="865.44116" retention_time_sec="660.67065">
<search_result>
<search_hit peptide="KTESHHK" massdiff="5.4931640625E-4" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
<search_score name="hyperscore" value="14.502"/>
<search_score name="nextscore" value="10.054"/>
<search_score name="expect" value="5.772049e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.995640" all_ntt_prob="(0.995640,0.995640,0.995640)">
<search_score_summary>
<parameter name="fval" value="0.836835"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.634725"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="13351" uncalibrated_precursor_neutral_mass="1166.6594" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.13351.13351.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=13351" end_scan="13351" index="4342" precursor_neutral_mass="1166.6582" retention_time_sec="665.1315">
<search_result>
<search_hit peptide="KIEPFYKGGK" massdiff="1.0087890625" calc_neutral_pep_mass="1165.6494" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transducin beta-like protein 3 OS=Homo sapiens OX=9606 GN=TBL3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="4" protein="sp|Q12788|TBL3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="nextscore" value="0.0"/>
<search_score name="expect" value="1.340768e+00"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="13698" uncalibrated_precursor_neutral_mass="865.44135" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.13698.13698.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=13698" end_scan="13698" index="4508" precursor_neutral_mass="865.4418" retention_time_sec="680.7963">
<search_result>
<search_hit peptide="KTESHHK" massdiff="0.00115966796875" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="13872" uncalibrated_precursor_neutral_mass="918.489" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.13872.13872.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=13872" end_scan="13872" index="4606" precursor_neutral_mass="918.48895" retention_time_sec="688.5781">
<search_result>
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<search_score name="expect" value="2.071333e+00"/>
<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="14054" uncalibrated_precursor_neutral_mass="1166.654" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.14054.14054.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=14054" end_scan="14054" index="4696" precursor_neutral_mass="1166.6593" retention_time_sec="696.6443">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="14166" uncalibrated_precursor_neutral_mass="865.44135" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.14166.14166.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=14166" end_scan="14166" index="4744" precursor_neutral_mass="865.44183" retention_time_sec="701.7178">
<search_result>
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<alternative_protein protein_descr="Histone H2A type 1 OS=Homo sapiens OX=9606 GN=H2AC11 PE=1 SV=2" protein="sp|P0C0S8|H2A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
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<search_score name="expect" value="1.102242e-01"/>
<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="14500" uncalibrated_precursor_neutral_mass="887.4222" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.14500.14500.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=14500" end_scan="14500" index="4898" precursor_neutral_mass="887.4234" retention_time_sec="716.44415">
<search_result>
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<modification_info modified_peptide="KPCVDGGR">
<mod_aminoacid_mass mass="160.03065" position="3"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="14625" uncalibrated_precursor_neutral_mass="865.44086" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.14625.14625.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=14625" end_scan="14625" index="4957" precursor_neutral_mass="865.4415" retention_time_sec="721.9729">
<search_result>
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<search_score name="expect" value="1.715937e+00"/>
<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_hit>
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<spectrum_query start_scan="15015" uncalibrated_precursor_neutral_mass="887.4245" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.15015.15015.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=15015" end_scan="15015" index="5125" precursor_neutral_mass="887.4237" retention_time_sec="739.3369">
<search_result>
<search_hit peptide="KPCVDGGR" massdiff="-0.004638671875" calc_neutral_pep_mass="887.42834" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens OX=9606 GN=DDX17 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="4" protein="rev_sp|Q92841|DDX17_HUMAN" peptide_prev_aa="P" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<search_result>
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<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="KTESHHK" massdiff="0.00299072265625" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
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<search_score name="expect" value="3.465009e-01"/>
<analysis_result analysis="peptideprophet">
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<search_score_summary>
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<parameter name="nmc" value="0"/>
<parameter name="massd" value="3.455723"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
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<search_result>
<search_hit peptide="KTESHHK" massdiff="0.0013427734375" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2A type 1 OS=Homo sapiens OX=9606 GN=H2AC11 PE=1 SV=2" protein="sp|P0C0S8|H2A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<search_score_summary>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="17425" uncalibrated_precursor_neutral_mass="865.44214" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.17425.17425.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=17425" end_scan="17425" index="6288" precursor_neutral_mass="865.4435" retention_time_sec="846.1587">
<search_result>
<search_hit peptide="KTESHHK" massdiff="0.00286865234375" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2A type 1 OS=Homo sapiens OX=9606 GN=H2AC11 PE=1 SV=2" protein="sp|P0C0S8|H2A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
<search_score name="hyperscore" value="11.611"/>
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<search_score name="expect" value="7.113759e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.978563" all_ntt_prob="(0.978563,0.978563,0.978563)">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="3.314673"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="17879" uncalibrated_precursor_neutral_mass="865.4426" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.17879.17879.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=17879" end_scan="17879" index="6510" precursor_neutral_mass="865.44403" retention_time_sec="866.3585">
<search_result>
<search_hit peptide="KTESHHK" massdiff="0.00341796875" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2A type 1 OS=Homo sapiens OX=9606 GN=H2AC11 PE=1 SV=2" protein="sp|P0C0S8|H2A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
<search_score name="hyperscore" value="11.445"/>
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<search_score name="expect" value="1.140176e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.925937" all_ntt_prob="(0.925937,0.925937,0.925937)">
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<parameter name="fval" value="0.187325"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="3.949397"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="18337" uncalibrated_precursor_neutral_mass="865.4409" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.18337.18337.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=18337" end_scan="18337" index="6745" precursor_neutral_mass="865.44244" retention_time_sec="886.7599">
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<search_hit peptide="KTESHHK" massdiff="0.0018310546875" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2A type 1 OS=Homo sapiens OX=9606 GN=H2AC11 PE=1 SV=2" protein="sp|P0C0S8|H2A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
<search_score name="hyperscore" value="14.849"/>
<search_score name="nextscore" value="10.405"/>
<search_score name="expect" value="5.562652e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.993480" all_ntt_prob="(0.993480,0.993480,0.993480)">
<search_score_summary>
<parameter name="fval" value="0.746719"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="2.115749"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
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</search_hit>
</search_result>
</spectrum_query>
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<search_hit peptide="KDFEDICVVGR" massdiff="0.99951171875" calc_neutral_pep_mass="1336.6444" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA replication licensing factor MCM3 OS=Homo sapiens OX=9606 GN=MCM3 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="4" protein="rev_sp|P25205|MCM3_HUMAN" peptide_prev_aa="M" is_rejected="0">
<modification_info modified_peptide="KDFEDICVVGR">
<mod_aminoacid_mass mass="160.03065" position="7"/>
</modification_info>
<search_score name="hyperscore" value="9.046"/>
<search_score name="nextscore" value="0.0"/>
<search_score name="expect" value="1.196364e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.750947" all_ntt_prob="(0.750947,0.750947,0.750947)">
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<parameter name="fval" value="-0.122502"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-2.875199"/>
<parameter name="isomassd" value="1"/>
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</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
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<search_result>
<search_hit peptide="KTESHHK" massdiff="6.7138671875E-4" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2A type 1 OS=Homo sapiens OX=9606 GN=H2AC11 PE=1 SV=2" protein="sp|P0C0S8|H2A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-J OS=Homo sapiens OX=9606 GN=H2AC14 PE=1 SV=3" protein="sp|Q99878|H2A1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
<search_score name="hyperscore" value="15.592"/>
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<search_score name="expect" value="1.352869e-01"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
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</peptideprophet_result>
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</search_hit>
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</spectrum_query>
<spectrum_query start_scan="19224" uncalibrated_precursor_neutral_mass="1337.6405" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.19224.19224.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=19224" end_scan="19224" index="7199" precursor_neutral_mass="1337.6427" retention_time_sec="925.96216">
<search_result>
<search_hit peptide="KYPVCTSSPSGR" massdiff="0.0029296875" calc_neutral_pep_mass="1337.6398" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein chibby homolog 3 OS=Homo sapiens OX=9606 GN=CBY3 PE=3 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="4" protein="rev_sp|A6NI87|CBY3_HUMAN" peptide_prev_aa="V" is_rejected="0">
<modification_info modified_peptide="KYPVCTSSPSGR">
<mod_aminoacid_mass mass="160.03065" position="5"/>
</modification_info>
<search_score name="hyperscore" value="10.082"/>
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<search_score name="expect" value="1.066686e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.951185" all_ntt_prob="(0.951185,0.951185,0.951185)">
<search_score_summary>
<parameter name="fval" value="0.290518"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="2.190192"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
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<search_result>
<search_hit peptide="KTESHHK" massdiff="4.2724609375E-4" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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</search_score_summary>
</peptideprophet_result>
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</spectrum_query>
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<search_result>
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<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<search_result>
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<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<search_hit peptide="KTESHHK" massdiff="-4.2724609375E-4" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<search_score name="hyperscore" value="8.554"/>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_score name="expect" value="1.633052e+00"/>
<analysis_result analysis="peptideprophet">
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<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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</peptideprophet_result>
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<spectrum_query start_scan="22269" uncalibrated_precursor_neutral_mass="1168.7286" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.22269.22269.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=22269" end_scan="22269" index="8516" precursor_neutral_mass="1168.7286" retention_time_sec="1060.4294">
<search_result>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<search_result>
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-H OS=Homo sapiens OX=9606 GN=H2AC12 PE=1 SV=3" protein="sp|Q96KK5|H2A1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<search_result>
<search_hit peptide="KTESHHK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="865.4406" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="8" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Histone H2A type 1-D OS=Homo sapiens OX=9606 GN=H2AC7 PE=1 SV=2" protein="sp|P20671|H2A1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 2-A OS=Homo sapiens OX=9606 GN=H2AC18 PE=1 SV=3" protein="sp|Q6FI13|H2A2A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 3 OS=Homo sapiens OX=9606 GN=H2AC25 PE=1 SV=3" protein="sp|Q7L7L0|H2A3_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<search_result>
<search_hit peptide="KSEPAEPCIGSK" massdiff="-0.001953125" calc_neutral_pep_mass="1301.6284" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nuclear receptor-binding factor 2 OS=Homo sapiens OX=9606 GN=NRBF2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="4" protein="sp|Q96F24|NRBF2_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<parameter name="massd" value="-1.500524"/>
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</peptideprophet_result>
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</search_hit>
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<search_result>
<search_hit peptide="KAPKGLGKVGSK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1168.7291" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neuron navigator 1 OS=Homo sapiens OX=9606 GN=NAV1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="4" protein="sp|Q8NEY1|NAV1_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_result>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="25059" uncalibrated_precursor_neutral_mass="816.4797" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25059.25059.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25059" end_scan="25059" index="10285" precursor_neutral_mass="816.48" retention_time_sec="1182.8356">
<search_result>
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<search_result>
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<spectrum_query start_scan="25074" uncalibrated_precursor_neutral_mass="838.4511" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25074.25074.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25074" end_scan="25074" index="10297" precursor_neutral_mass="838.44824" retention_time_sec="1183.5342">
<search_result>
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<spectrum_query start_scan="25079" uncalibrated_precursor_neutral_mass="1460.7467" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25079.25079.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25079" end_scan="25079" index="10302" precursor_neutral_mass="1460.7527" retention_time_sec="1183.719">
<search_result>
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<spectrum_query start_scan="25081" uncalibrated_precursor_neutral_mass="979.44" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25081.25081.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25081" end_scan="25081" index="10304" precursor_neutral_mass="979.4403" retention_time_sec="1183.7926">
<search_result>
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<spectrum_query start_scan="25092" uncalibrated_precursor_neutral_mass="819.409" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25092.25092.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25092" end_scan="25092" index="10313" precursor_neutral_mass="819.4084" retention_time_sec="1184.1984">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="KAAGAGAAK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="743.42896" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.5 OS=Homo sapiens OX=9606 GN=H1-5 PE=1 SV=3" num_tot_proteins="2" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="rev_sp|P16401|H15_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_hit>
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<spectrum_query start_scan="25296" uncalibrated_precursor_neutral_mass="1151.5667" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25296.25296.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25296" end_scan="25296" index="10498" precursor_neutral_mass="1151.5673" retention_time_sec="1192.9885">
<search_result>
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</analysis_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="AAGAGAAK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="615.334" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.5 OS=Homo sapiens OX=9606 GN=H1-5 PE=1 SV=3" num_tot_proteins="2" tot_num_ions="14" hit_rank="1" num_matched_ions="12" protein="rev_sp|P16401|H15_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H1.5 OS=Homo sapiens OX=9606 GN=H1-5 PE=1 SV=3" protein="sp|P16401|H15_HUMAN" peptide_prev_aa="K" peptide_next_aa="R" num_tol_term="0"/>
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<search_result>
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<search_score name="hyperscore" value="9.525"/>
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<spectrum_query start_scan="25324" uncalibrated_precursor_neutral_mass="1046.4614" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25324.25324.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25324" end_scan="25324" index="10525" precursor_neutral_mass="1046.4604" retention_time_sec="1194.1633">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_score name="expect" value="2.261338e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.701774" all_ntt_prob="(0.701774,0.701774,0.701774)">
<search_score_summary>
<parameter name="fval" value="-0.169770"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.510156"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25409" uncalibrated_precursor_neutral_mass="822.3979" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25409.25409.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25409" end_scan="25409" index="10605" precursor_neutral_mass="822.398" retention_time_sec="1197.9711">
<search_result>
<search_hit peptide="HAAENPGK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="822.3984" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens OX=9606 GN=HNRNPU PE=1 SV=6" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|Q00839|HNRPU_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="13.002"/>
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<search_score name="expect" value="1.358952e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.961597" all_ntt_prob="(0.961597,0.961597,0.961597)">
<search_score_summary>
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.445296"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25428" uncalibrated_precursor_neutral_mass="807.4344" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25428.25428.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25428" end_scan="25428" index="10622" precursor_neutral_mass="807.4344" retention_time_sec="1198.67">
<search_result>
<search_hit peptide="KTLTCGK" massdiff="1.0023193359375" calc_neutral_pep_mass="806.43207" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger protein 671 OS=Homo sapiens OX=9606 GN=ZNF671 PE=2 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q8TAW3|ZN671_HUMAN" peptide_prev_aa="E" is_rejected="0">
<modification_info modified_peptide="KTLTCGK">
<mod_aminoacid_mass mass="160.03065" position="5"/>
</modification_info>
<search_score name="hyperscore" value="12.651"/>
<search_score name="nextscore" value="11.624"/>
<search_score name="expect" value="2.060230e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.768829" all_ntt_prob="(0.768829,0.768829,0.768829)">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.284053"/>
<parameter name="isomassd" value="1"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25457" uncalibrated_precursor_neutral_mass="1186.6263" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.25457.25457.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25457" end_scan="25457" index="10648" precursor_neutral_mass="1186.6265" retention_time_sec="1200.0248">
<search_result>
<search_hit peptide="KGQNPTGETKK" massdiff="-0.0040283203125" calc_neutral_pep_mass="1186.6305" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ribosome-binding protein 1 OS=Homo sapiens OX=9606 GN=RRBP1 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="5" protein="rev_sp|Q9P2E9|RRBP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="10.829"/>
<search_score name="nextscore" value="10.771"/>
<search_score name="expect" value="1.619755e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.531174" all_ntt_prob="(0.531174,0.531174,0.531174)">
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<parameter name="fval" value="-0.303260"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-3.394755"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25460" uncalibrated_precursor_neutral_mass="669.417" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25460.25460.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25460" end_scan="25460" index="10651" precursor_neutral_mass="669.41693" retention_time_sec="1200.1349">
<search_result>
<search_hit peptide="KPVGAAK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="669.4173" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.2 OS=Homo sapiens OX=9606 GN=H1-2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P16403|H12_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="21.017"/>
<search_score name="nextscore" value="17.5"/>
<search_score name="expect" value="1.962927e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.959315" all_ntt_prob="(0.959315,0.959315,0.959315)">
<search_score_summary>
<parameter name="fval" value="0.334407"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.547059"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25477" uncalibrated_precursor_neutral_mass="689.33295" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25477.25477.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25477" end_scan="25477" index="10668" precursor_neutral_mass="689.3333" retention_time_sec="1200.7594">
<search_result>
<search_hit peptide="PSGSGGTK" massdiff="-0.0010986328125" calc_neutral_pep_mass="689.3344" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="AP-4 complex accessory subunit RUSC2 OS=Homo sapiens OX=9606 GN=RUSC2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q8N2Y8|RUSC2_HUMAN" peptide_prev_aa="P" is_rejected="0">
<search_score name="hyperscore" value="13.533"/>
<search_score name="nextscore" value="12.423"/>
<search_score name="expect" value="2.099441e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.899141" all_ntt_prob="(0.899141,0.899141,0.899141)">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.593759"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25479" uncalibrated_precursor_neutral_mass="827.4132" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25479.25479.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25479" end_scan="25479" index="10669" precursor_neutral_mass="827.41254" retention_time_sec="1200.963">
<search_result>
<search_hit peptide="HAVSEGTK" massdiff="-0.00115966796875" calc_neutral_pep_mass="827.4137" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 2-K1 OS=Homo sapiens OX=9606 GN=H2BK1 PE=3 SV=1" num_tot_proteins="16" tot_num_ions="14" hit_rank="1" num_matched_ions="14" protein="sp|A0A2R8Y619|H2BK1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="25480" uncalibrated_precursor_neutral_mass="783.4597" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25480.25480.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25480" end_scan="25480" index="10670" precursor_neutral_mass="783.4592" retention_time_sec="1200.9996">
<search_result>
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="25481" uncalibrated_precursor_neutral_mass="827.4132" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25481.25481.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25481" end_scan="25481" index="10671" precursor_neutral_mass="827.4125" retention_time_sec="1201.0365">
<search_result>
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<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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</peptideprophet_result>
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<spectrum_query start_scan="25482" uncalibrated_precursor_neutral_mass="783.4597" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25482.25482.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25482" end_scan="25482" index="10672" precursor_neutral_mass="783.4592" retention_time_sec="1201.0731">
<search_result>
<search_hit peptide="KPAAAAGAK" massdiff="-0.00103759765625" calc_neutral_pep_mass="783.46027" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.4 OS=Homo sapiens OX=9606 GN=H1-4 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="13" protein="sp|P10412|H14_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="nextscore" value="23.258"/>
<search_score name="expect" value="4.467393e-04"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.996487" all_ntt_prob="(0.996487,0.996487,0.996487)">
<search_score_summary>
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.324378"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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</spectrum_query>
<spectrum_query start_scan="25485" uncalibrated_precursor_neutral_mass="689.37036" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25485.25485.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25485" end_scan="25485" index="10675" precursor_neutral_mass="689.3698" retention_time_sec="1201.1831">
<search_result>
<search_hit peptide="LSGASQK" massdiff="-9.765625E-4" calc_neutral_pep_mass="689.3708" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens OX=9606 GN=PDHA1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P08559|ODPA_HUMAN" peptide_prev_aa="V" is_rejected="0">
<search_score name="hyperscore" value="16.722"/>
<search_score name="nextscore" value="15.847"/>
<search_score name="expect" value="1.720665e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.840447" all_ntt_prob="(0.840447,0.840447,0.840447)">
<search_score_summary>
<parameter name="fval" value="-0.008824"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.416600"/>
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</search_score_summary>
</peptideprophet_result>
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<search_result>
<search_hit peptide="QKAEADKNDK" massdiff="-0.002685546875" calc_neutral_pep_mass="1128.541" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein HSP 90-alpha OS=Homo sapiens OX=9606 GN=HSP90AA1 PE=1 SV=5" num_tot_proteins="3" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|P07900|HS90A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="25514" uncalibrated_precursor_neutral_mass="832.42804" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25514.25514.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25514" end_scan="25514" index="10703" precursor_neutral_mass="832.4276" retention_time_sec="1202.3947">
<search_result>
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</peptideprophet_result>
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<spectrum_query start_scan="25516" uncalibrated_precursor_neutral_mass="965.6377" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25516.25516.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25516" end_scan="25516" index="10705" precursor_neutral_mass="965.63763" retention_time_sec="1202.4681">
<search_result>
<search_hit peptide="KKPQKLPK" massdiff="-9.1552734375E-4" calc_neutral_pep_mass="965.63855" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="4" protein="rev_sp|Q9Y2S6|TMA7_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<search_result>
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<search_score name="expect" value="2.917693e-01"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="25529" uncalibrated_precursor_neutral_mass="967.58105" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25529.25529.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25529" end_scan="25529" index="10717" precursor_neutral_mass="967.5807" retention_time_sec="1203.0898">
<search_result>
<search_hit peptide="KAKPVNSKP" massdiff="-7.32421875E-4" calc_neutral_pep_mass="967.5814" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Fatty acid CoA ligase Acsl3 OS=Homo sapiens OX=9606 GN=ACSL3 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|O95573|ACSL3_HUMAN" peptide_prev_aa="I" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25537" uncalibrated_precursor_neutral_mass="990.45526" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25537.25537.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25537" end_scan="25537" index="10725" precursor_neutral_mass="990.46094" retention_time_sec="1203.383">
<search_result>
<search_hit peptide="KEQSGGEEK" massdiff="-7.9345703125E-4" calc_neutral_pep_mass="990.46173" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Sodium channel protein type 1 subunit alpha OS=Homo sapiens OX=9606 GN=SCN1A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="5" protein="sp|P35498|SCN1A_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="25540" uncalibrated_precursor_neutral_mass="1000.41034" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25540.25540.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25540" end_scan="25540" index="10728" precursor_neutral_mass="1000.41034" retention_time_sec="1203.4934">
<search_result>
<search_hit peptide="QDNGSDAPSK" massdiff="5.4931640625E-4" calc_neutral_pep_mass="1000.4098" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neuronal migration protein doublecortin OS=Homo sapiens OX=9606 GN=DCX PE=1 SV=4" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="5" protein="rev_sp|O43602|DCX_HUMAN" peptide_prev_aa="D" is_rejected="0">
<modification_info modified_peptide="Q[111]DNGSDAPSK">
<mod_aminoacid_mass mass="111.032074" position="1"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="25551" uncalibrated_precursor_neutral_mass="1026.5568" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25551.25551.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25551" end_scan="25551" index="10738" precursor_neutral_mass="1026.5566" retention_time_sec="1204.0404">
<search_result>
<search_hit peptide="KAEAERPAR" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1026.557" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Fanconi anemia group F protein OS=Homo sapiens OX=9606 GN=FANCF PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|Q9NPI8|FANCF_HUMAN" peptide_prev_aa="G" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="25553" uncalibrated_precursor_neutral_mass="852.4084" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25553.25553.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25553" end_scan="25553" index="10740" precursor_neutral_mass="852.4084" retention_time_sec="1204.1135">
<search_result>
<search_hit peptide="KGNYSER" massdiff="-5.4931640625E-4" calc_neutral_pep_mass="852.40894" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2A type 1-B/E OS=Homo sapiens OX=9606 GN=H2AC4 PE=1 SV=2" num_tot_proteins="3" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P04908|H2A1B_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="25575" uncalibrated_precursor_neutral_mass="754.37244" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25575.25575.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25575" end_scan="25575" index="10761" precursor_neutral_mass="754.37384" retention_time_sec="1205.0656">
<search_result>
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<alternative_protein protein_descr="Y+L amino acid transporter 1 OS=Homo sapiens OX=9606 GN=SLC7A7 PE=1 SV=2" protein="rev_sp|Q9UM01|YLAT1_HUMAN" peptide_prev_aa="P" peptide_next_aa="V" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25703" uncalibrated_precursor_neutral_mass="544.29736" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25703.25703.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25703" end_scan="25703" index="10884" precursor_neutral_mass="544.2965" retention_time_sec="1210.5884">
<search_result>
<search_hit peptide="GLGGGGK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="544.2969" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Choline O-acetyltransferase OS=Homo sapiens OX=9606 GN=CHAT PE=1 SV=4" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P28329|CLAT_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="expect" value="5.945315e-01"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25713" uncalibrated_precursor_neutral_mass="775.3714" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25713.25713.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25713" end_scan="25713" index="10894" precursor_neutral_mass="775.37134" retention_time_sec="1210.9558">
<search_result>
<search_hit peptide="KEDEGAK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="775.37115" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neural cell adhesion molecule 2 OS=Homo sapiens OX=9606 GN=NCAM2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="rev_sp|O15394|NCAM2_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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<search_score name="expect" value="2.089842e+00"/>
<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25717" uncalibrated_precursor_neutral_mass="859.44995" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25717.25717.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25717" end_scan="25717" index="10897" precursor_neutral_mass="859.44635" retention_time_sec="1211.3573">
<search_result>
<search_hit peptide="KAGTDGVGR" massdiff="-0.00482177734375" calc_neutral_pep_mass="859.4512" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Collagen alpha-1(XXVIII) chain OS=Homo sapiens OX=9606 GN=COL28A1 PE=2 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q2UY09|COSA1_HUMAN" peptide_prev_aa="G" is_rejected="0">
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<search_score name="expect" value="1.379490e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.550061" all_ntt_prob="(0.550061,0.550061,0.550061)">
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<parameter name="massd" value="-5.610298"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25720" uncalibrated_precursor_neutral_mass="530.28094" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25720.25720.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25720" end_scan="25720" index="10900" precursor_neutral_mass="530.28064" retention_time_sec="1211.4678">
<search_result>
<search_hit peptide="GGAAGAK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="530.28125" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger and BTB domain-containing protein 4 OS=Homo sapiens OX=9606 GN=ZBTB4 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="rev_sp|Q9P1Z0|ZBTB4_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<search_score name="expect" value="1.353630e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.855780" all_ntt_prob="(0.855780,0.855780,0.855780)">
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<parameter name="fval" value="0.016983"/>
<parameter name="ntt" value="0"/>
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<parameter name="massd" value="-1.150996"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="25722" uncalibrated_precursor_neutral_mass="1104.4679" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25722.25722.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25722" end_scan="25722" index="10902" precursor_neutral_mass="1104.4689" retention_time_sec="1211.5413">
<search_result>
<search_hit peptide="KGAEEGEDDR" massdiff="6.103515625E-4" calc_neutral_pep_mass="1104.4683" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein C-like 3 OS=Homo sapiens OX=9606 GN=HNRNPCL3 PE=2 SV=1" num_tot_proteins="2" tot_num_ions="18" hit_rank="1" num_matched_ions="4" protein="sp|B7ZW38|HNRC3_HUMAN" peptide_prev_aa="E" is_rejected="0">
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein C-like 4 OS=Homo sapiens OX=9606 GN=HNRNPCL4 PE=3 SV=1" protein="sp|P0DMR1|HNRC4_HUMAN" peptide_prev_aa="E" peptide_next_aa="D" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="25734" uncalibrated_precursor_neutral_mass="673.3758" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.25734.25734.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25734" end_scan="25734" index="10914" precursor_neutral_mass="673.3751" retention_time_sec="1211.9822">
<search_result>
<search_hit peptide="KIGDGGK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="673.37585" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Obg-like ATPase 1 OS=Homo sapiens OX=9606 GN=OLA1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q9NTK5|OLA1_HUMAN" peptide_prev_aa="P" is_rejected="0">
<search_score name="hyperscore" value="13.867"/>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="25737" uncalibrated_precursor_neutral_mass="1013.6234" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25737.25737.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25737" end_scan="25737" index="10916" precursor_neutral_mass="1013.62335" retention_time_sec="1212.2361">
<search_result>
<search_hit peptide="KPAAATVTKK" massdiff="6.103515625E-5" calc_neutral_pep_mass="1013.6233" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.2 OS=Homo sapiens OX=9606 GN=H1-2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="14" protein="sp|P16403|H12_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="7.034631e-04"/>
<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="25739" uncalibrated_precursor_neutral_mass="930.4772" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25739.25739.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25739" end_scan="25739" index="10918" precursor_neutral_mass="930.47675" retention_time_sec="1212.3093">
<search_result>
<search_hit peptide="NQLETAQK" massdiff="-3.0517578125E-4" calc_neutral_pep_mass="930.47705" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="WD repeat-containing protein 91 OS=Homo sapiens OX=9606 GN=WDR91 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="rev_sp|A4D1P6|WDR91_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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</search_hit>
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<spectrum_query start_scan="25740" uncalibrated_precursor_neutral_mass="916.4721" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25740.25740.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25740" end_scan="25740" index="10919" precursor_neutral_mass="916.47345" retention_time_sec="1212.3461">
<search_result>
<search_hit peptide="IAGSWEVR" massdiff="-0.003173828125" calc_neutral_pep_mass="916.4766" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative uncharacterized protein encoded by LINC00269 OS=Homo sapiens OX=9606 GN=LINC00269 PE=5 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="rev_sp|Q8N2A0|CX062_HUMAN" peptide_prev_aa="L" is_rejected="0">
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="25761" uncalibrated_precursor_neutral_mass="900.49286" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.25761.25761.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=25761" end_scan="25761" index="10939" precursor_neutral_mass="900.4919" retention_time_sec="1213.2595">
<search_result>
<search_hit peptide="LAHYNKR" massdiff="-0.0010986328125" calc_neutral_pep_mass="900.493" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" num_tot_proteins="15" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="AAGVTVG" massdiff="-5.4931640625E-4" calc_neutral_pep_mass="573.3122" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Macrophage-expressed gene 1 protein OS=Homo sapiens OX=9606 GN=MPEG1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q2M385|MPEG1_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<search_result>
<search_hit peptide="KLEDGPK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="785.4283" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Elongation factor 1-alpha 1 OS=Homo sapiens OX=9606 GN=EEF1A1 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P68104|EF1A1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="KLEDGPK" massdiff="0.0" calc_neutral_pep_mass="785.4283" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Elongation factor 1-alpha 1 OS=Homo sapiens OX=9606 GN=EEF1A1 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P68104|EF1A1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="Peptidyl-prolyl cis-trans isomerase A-like 4D OS=Homo sapiens OX=9606 GN=PPIAL4D PE=3 SV=1" protein="sp|F5H284|PAL4D_HUMAN" peptide_prev_aa="R" peptide_next_aa="G" num_tol_term="0"/>
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<alternative_protein protein_descr="Peptidyl-prolyl cis-trans isomerase A-like 4G OS=Homo sapiens OX=9606 GN=PPIAL4G PE=3 SV=1" protein="sp|P0DN37|PAL4G_HUMAN" peptide_prev_aa="R" peptide_next_aa="G" num_tol_term="0"/>
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<search_result>
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<spectrum_query start_scan="26312" uncalibrated_precursor_neutral_mass="638.30194" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26312.26312.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26312" end_scan="26312" index="11467" precursor_neutral_mass="638.302" retention_time_sec="1236.7903">
<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="AVTAAGAVK" massdiff="-8.544921875E-4" calc_neutral_pep_mass="786.4599" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Krueppel-like factor 7 OS=Homo sapiens OX=9606 GN=KLF7 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|O75840|KLF7_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="26326" uncalibrated_precursor_neutral_mass="902.48474" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26326.26326.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26326" end_scan="26326" index="11481" precursor_neutral_mass="902.4853" retention_time_sec="1237.3044">
<search_result>
<search_hit peptide="KENQVSAK" massdiff="0.003173828125" calc_neutral_pep_mass="902.4821" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Adenomatous polyposis coli protein OS=Homo sapiens OX=9606 GN=APC PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="4" protein="sp|P25054|APC_HUMAN" peptide_prev_aa="S" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="CDELTRK" massdiff="-0.00701904296875" calc_neutral_pep_mass="920.43854" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens OX=9606 GN=DDX5 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P17844|DDX5_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="CDELTRK">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="TGPNGCGK" massdiff="-0.0018310546875" calc_neutral_pep_mass="789.34393" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="ATP-binding cassette sub-family D member 1 OS=Homo sapiens OX=9606 GN=ABCD1 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="14" hit_rank="1" num_matched_ions="5" protein="sp|P33897|ABCD1_HUMAN" peptide_prev_aa="I" is_rejected="0">
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<modification_info modified_peptide="TGPNGCGK">
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<search_result>
<search_hit peptide="RVTVPKP" massdiff="-5.4931640625E-4" calc_neutral_pep_mass="795.49664" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Uncharacterized protein FLJ43738 OS=Homo sapiens OX=9606 PE=2 SV=1" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q6ZUG5|YC006_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<spectrum_query start_scan="26349" uncalibrated_precursor_neutral_mass="889.46173" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26349.26349.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26349" end_scan="26349" index="11503" precursor_neutral_mass="889.4574" retention_time_sec="1238.2931">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Heat shock cognate 71 kDa protein OS=Homo sapiens OX=9606 GN=HSPA8 PE=1 SV=1" protein="sp|P11142|HSP7C_HUMAN" peptide_prev_aa="R" peptide_next_aa="Y" num_tol_term="0"/>
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<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein C-like 1 OS=Homo sapiens OX=9606 GN=HNRNPCL1 PE=1 SV=1" protein="sp|O60812|HNRC1_HUMAN" peptide_prev_aa="L" peptide_next_aa="Q" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="APGTPHSHTKPYVR" massdiff="-0.002197265625" calc_neutral_pep_mass="1546.8004" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL18 OS=Homo sapiens OX=9606 GN=RPL18 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="11" protein="sp|Q07020|RL18_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="26385" uncalibrated_precursor_neutral_mass="1484.6571" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.26385.26385.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26385" end_scan="26385" index="11537" precursor_neutral_mass="1484.6572" retention_time_sec="1239.9026">
<search_result>
<search_hit peptide="YHTVNGHNCEVR" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1484.6578" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein A1-like 3 OS=Homo sapiens OX=9606 GN=HNRNPA1L3 PE=4 SV=1" num_tot_proteins="2" tot_num_ions="22" hit_rank="1" num_matched_ions="12" protein="sp|A0A2R8Y4L2|RA1L3_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5" protein="sp|P09651|ROA1_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
<modification_info modified_peptide="YHTVNGHNCEVR">
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<analysis_result analysis="peptideprophet">
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<parameter name="massd" value="-0.411106"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="26387" uncalibrated_precursor_neutral_mass="1546.7983" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.26387.26387.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26387" end_scan="26387" index="11539" precursor_neutral_mass="1546.7985" retention_time_sec="1239.9757">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="26388" uncalibrated_precursor_neutral_mass="1484.6571" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26388.26388.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26388" end_scan="26388" index="11540" precursor_neutral_mass="1484.658" retention_time_sec="1240.0123">
<search_result>
<search_hit peptide="YHTVNGHNCEVR" massdiff="1.220703125E-4" calc_neutral_pep_mass="1484.6578" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein A1-like 3 OS=Homo sapiens OX=9606 GN=HNRNPA1L3 PE=4 SV=1" num_tot_proteins="2" tot_num_ions="22" hit_rank="1" num_matched_ions="16" protein="sp|A0A2R8Y4L2|RA1L3_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5" protein="sp|P09651|ROA1_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
<modification_info modified_peptide="YHTVNGHNCEVR">
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</modification_info>
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<search_score name="expect" value="3.111064e-06"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
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</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
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<search_result>
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<modification_info modified_peptide="KEECPAVR">
<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
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<search_score name="expect" value="7.406406e-03"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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<modification_info modified_peptide="AALEACHK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
<parameter name="massd" value="-14.673985"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="26406" uncalibrated_precursor_neutral_mass="793.4073" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26406.26406.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26406" end_scan="26406" index="11558" precursor_neutral_mass="793.4085" retention_time_sec="1240.6729">
<search_result>
<search_hit peptide="QGPGPGGPK" massdiff="3.0517578125E-4" calc_neutral_pep_mass="793.4082" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Splicing factor, proline- and glutamine-rich OS=Homo sapiens OX=9606 GN=SFPQ PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P23246|SFPQ_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999455" all_ntt_prob="(0.999455,0.999455,0.999455)">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.384639"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<search_result>
<search_hit peptide="KPFSQHVR" massdiff="4.2724609375E-4" calc_neutral_pep_mass="997.5457" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL6 OS=Homo sapiens OX=9606 GN=RPL6 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="11" protein="sp|Q02878|RL6_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="GKYKEETIEK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1223.6396" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL24 OS=Homo sapiens OX=9606 GN=RPL26 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|P61254|RL26_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="26419" uncalibrated_precursor_neutral_mass="844.42957" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26419.26419.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26419" end_scan="26419" index="11570" precursor_neutral_mass="844.43115" retention_time_sec="1241.2933">
<search_result>
<search_hit peptide="EAAQEAVK" massdiff="0.00213623046875" calc_neutral_pep_mass="844.429" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1" num_tot_proteins="2" tot_num_ions="14" hit_rank="1" num_matched_ions="11" protein="sp|O43390|HNRPR_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2" protein="sp|O60506|HNRPQ_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
<search_score name="hyperscore" value="19.268"/>
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
<parameter name="massd" value="2.529793"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="26420" uncalibrated_precursor_neutral_mass="944.493" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26420.26420.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26420" end_scan="26420" index="11571" precursor_neutral_mass="944.4908" retention_time_sec="1241.33">
<search_result>
<search_hit peptide="KLEAAEER" massdiff="-0.00189208984375" calc_neutral_pep_mass="944.4927" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Stathmin OS=Homo sapiens OX=9606 GN=STMN1 PE=1 SV=3" num_tot_proteins="3" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|P16949|STMN1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="QIEAQEKPR" massdiff="-0.0096435546875" calc_neutral_pep_mass="1097.5828" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens OX=9606 GN=SPTBN1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|Q01082|SPTB2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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</search_hit>
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<spectrum_query start_scan="26428" uncalibrated_precursor_neutral_mass="869.4505" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26428.26428.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26428" end_scan="26428" index="11579" precursor_neutral_mass="869.45105" retention_time_sec="1241.6241">
<search_result>
<search_hit peptide="PFSQHVR" massdiff="3.0517578125E-4" calc_neutral_pep_mass="869.45074" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL6 OS=Homo sapiens OX=9606 GN=RPL6 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q02878|RL6_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="2.971848e+00"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="26430" uncalibrated_precursor_neutral_mass="1356.6785" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26430.26430.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26430" end_scan="26430" index="11581" precursor_neutral_mass="1356.6776" retention_time_sec="1241.6978">
<search_result>
<search_hit peptide="KPNEGADGQWKK" massdiff="-8.544921875E-4" calc_neutral_pep_mass="1356.6785" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="SERPINE1 mRNA-binding protein 1 OS=Homo sapiens OX=9606 GN=SERBP1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="11" protein="sp|Q8NC51|SERB1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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</peptideprophet_result>
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<spectrum_query start_scan="26434" uncalibrated_precursor_neutral_mass="815.4141" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26434.26434.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26434" end_scan="26434" index="11584" precursor_neutral_mass="815.4128" retention_time_sec="1241.9879">
<search_result>
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<alternative_protein protein_descr="14-3-3 protein sigma OS=Homo sapiens OX=9606 GN=SFN PE=1 SV=1" protein="sp|P31947|1433S_HUMAN" peptide_prev_aa="K" peptide_next_aa="Y" num_tol_term="0"/>
<alternative_protein protein_descr="14-3-3 protein gamma OS=Homo sapiens OX=9606 GN=YWHAG PE=1 SV=2" protein="sp|P61981|1433G_HUMAN" peptide_prev_aa="R" peptide_next_aa="Y" num_tol_term="0"/>
<alternative_protein protein_descr="14-3-3 protein epsilon OS=Homo sapiens OX=9606 GN=YWHAE PE=1 SV=1" protein="sp|P62258|1433E_HUMAN" peptide_prev_aa="K" peptide_next_aa="Y" num_tol_term="0"/>
<alternative_protein protein_descr="14-3-3 protein zeta/delta OS=Homo sapiens OX=9606 GN=YWHAZ PE=1 SV=1" protein="sp|P63104|1433Z_HUMAN" peptide_prev_aa="K" peptide_next_aa="Y" num_tol_term="0"/>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<search_result>
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<alternative_protein protein_descr="14-3-3 protein sigma OS=Homo sapiens OX=9606 GN=SFN PE=1 SV=1" protein="sp|P31947|1433S_HUMAN" peptide_prev_aa="K" peptide_next_aa="Y" num_tol_term="0"/>
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<alternative_protein protein_descr="14-3-3 protein zeta/delta OS=Homo sapiens OX=9606 GN=YWHAZ PE=1 SV=1" protein="sp|P63104|1433Z_HUMAN" peptide_prev_aa="K" peptide_next_aa="Y" num_tol_term="0"/>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="26533" uncalibrated_precursor_neutral_mass="778.3641" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26533.26533.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26533" end_scan="26533" index="11677" precursor_neutral_mass="778.3622" retention_time_sec="1246.1837">
<search_result>
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<spectrum_query start_scan="26539" uncalibrated_precursor_neutral_mass="574.3081" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26539.26539.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26539" end_scan="26539" index="11683" precursor_neutral_mass="574.3071" retention_time_sec="1246.404">
<search_result>
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<spectrum_query start_scan="26556" uncalibrated_precursor_neutral_mass="924.61285" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26556.26556.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26556" end_scan="26556" index="11699" precursor_neutral_mass="924.6125" retention_time_sec="1247.1599">
<search_result>
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<search_result>
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<spectrum_query start_scan="26560" uncalibrated_precursor_neutral_mass="1344.6649" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26560.26560.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26560" end_scan="26560" index="11703" precursor_neutral_mass="1344.6643" retention_time_sec="1247.3069">
<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="VRDVVTK" massdiff="2.44140625E-4" calc_neutral_pep_mass="815.4865" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens OX=9606 GN=TRAP1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|Q12931|TRAP1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="26590" uncalibrated_precursor_neutral_mass="1135.6179" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26590.26590.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26590" end_scan="26590" index="11732" precursor_neutral_mass="1135.6177" retention_time_sec="1248.5537">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="26604" uncalibrated_precursor_neutral_mass="811.49207" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26604.26604.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26604" end_scan="26604" index="11745" precursor_neutral_mass="811.49243" retention_time_sec="1249.2141">
<search_result>
<search_hit peptide="KGNGPIVK" massdiff="8.544921875E-4" calc_neutral_pep_mass="811.4916" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Adhesion G-protein coupled receptor G6 OS=Homo sapiens OX=9606 GN=ADGRG6 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q86SQ4|AGRG6_HUMAN" peptide_prev_aa="L" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="26606" uncalibrated_precursor_neutral_mass="1069.6274" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26606.26606.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26606" end_scan="26606" index="11747" precursor_neutral_mass="1069.6268" retention_time_sec="1249.2876">
<search_result>
<search_hit peptide="IAGQVAAANKK" massdiff="0.0025634765625" calc_neutral_pep_mass="1069.6243" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small ribosomal subunit protein eS19 OS=Homo sapiens OX=9606 GN=RPS19 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="12" protein="sp|P39019|RS19_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="26614" uncalibrated_precursor_neutral_mass="937.479" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26614.26614.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26614" end_scan="26614" index="11755" precursor_neutral_mass="937.4787" retention_time_sec="1249.5826">
<search_result>
<search_hit peptide="TAAESFKGK" massdiff="-0.0081787109375" calc_neutral_pep_mass="937.4869" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein disulfide-isomerase OS=Homo sapiens OX=9606 GN=P4HB PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P07237|PDIA1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="26616" uncalibrated_precursor_neutral_mass="830.4864" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26616.26616.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26616" end_scan="26616" index="11757" precursor_neutral_mass="830.48505" retention_time_sec="1249.6565">
<search_result>
<search_hit peptide="LNKSELK" massdiff="-0.0010986328125" calc_neutral_pep_mass="830.48615" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein S100-A4 OS=Homo sapiens OX=9606 GN=S100A4 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P26447|S10A4_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="26626" uncalibrated_precursor_neutral_mass="780.352" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26626.26626.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26626" end_scan="26626" index="11766" precursor_neutral_mass="780.35144" retention_time_sec="1250.1683">
<search_result>
<search_hit peptide="SGNFGGSR" massdiff="0.0" calc_neutral_pep_mass="780.35144" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens OX=9606 GN=HNRNPA2B1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="10" protein="sp|P22626|ROA2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="26627" uncalibrated_precursor_neutral_mass="1244.4991" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26627.26627.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26627" end_scan="26627" index="11767" precursor_neutral_mass="1244.4982" retention_time_sec="1250.205">
<search_result>
<search_hit peptide="NCSETQYESK" massdiff="2.44140625E-4" calc_neutral_pep_mass="1244.4979" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="14-3-3 protein gamma OS=Homo sapiens OX=9606 GN=YWHAG PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|P61981|1433G_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="NCSETQYESK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<spectrum_query start_scan="26633" uncalibrated_precursor_neutral_mass="724.42395" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26633.26633.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26633" end_scan="26633" index="11773" precursor_neutral_mass="724.4231" retention_time_sec="1250.4259">
<search_result>
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<search_result>
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<search_result>
<search_hit peptide="EAGGGGVGGPGAK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1012.4937" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="SERPINE1 mRNA-binding protein 1 OS=Homo sapiens OX=9606 GN=SERBP1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="14" protein="sp|Q8NC51|SERB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="ENQLEGK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="816.3977" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Centrosomal protein of 290 kDa OS=Homo sapiens OX=9606 GN=CEP290 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|O15078|CE290_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="26702" uncalibrated_precursor_neutral_mass="777.3033" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26702.26702.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26702" end_scan="26702" index="11839" precursor_neutral_mass="777.3027" retention_time_sec="1253.3837">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="26925" uncalibrated_precursor_neutral_mass="989.4658" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26925.26925.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26925" end_scan="26925" index="12053" precursor_neutral_mass="989.4638" retention_time_sec="1262.8955">
<search_result>
<search_hit peptide="HEFQAETK" massdiff="1.00244140625" calc_neutral_pep_mass="988.46136" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens OX=9606 GN=TRAP1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="10" protein="sp|Q12931|TRAP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="26926" uncalibrated_precursor_neutral_mass="1087.5139" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26926.26926.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26926" end_scan="26926" index="12054" precursor_neutral_mass="1087.5157" retention_time_sec="1262.9324">
<search_result>
<search_hit peptide="GSETPGATPGSK" massdiff="0.001220703125" calc_neutral_pep_mass="1087.5145" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|O75533|SF3B1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="26937" uncalibrated_precursor_neutral_mass="585.3121" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26937.26937.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26937" end_scan="26937" index="12064" precursor_neutral_mass="585.3126" retention_time_sec="1263.4829">
<search_result>
<search_hit peptide="SVAAAAP" massdiff="4.2724609375E-4" calc_neutral_pep_mass="585.3122" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="NAC-alpha domain-containing protein 1 OS=Homo sapiens OX=9606 GN=NACAD PE=1 SV=3" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|O15069|NACAD_HUMAN" peptide_prev_aa="G" is_rejected="0">
<alternative_protein protein_descr="Fibulin-2 OS=Homo sapiens OX=9606 GN=FBLN2 PE=1 SV=2" protein="sp|P98095|FBLN2_HUMAN" peptide_prev_aa="P" peptide_next_aa="R" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="26938" uncalibrated_precursor_neutral_mass="785.38635" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26938.26938.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26938" end_scan="26938" index="12065" precursor_neutral_mass="785.3851" retention_time_sec="1263.5199">
<search_result>
<search_hit peptide="VGCSVHK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="785.38544" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Homo sapiens OX=9606 GN=HNRNPC PE=1 SV=4" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P07910|HNRPC_HUMAN" peptide_prev_aa="I" is_rejected="0">
<alternative_protein protein_descr="RNA-binding Raly-like protein OS=Homo sapiens OX=9606 GN=RALYL PE=1 SV=2" protein="sp|Q86SE5|RALYL_HUMAN" peptide_prev_aa="I" peptide_next_aa="G" num_tol_term="0"/>
<modification_info modified_peptide="VGCSVHK">
<mod_aminoacid_mass mass="160.03065" position="3"/>
</modification_info>
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<search_score name="expect" value="7.141380e-02"/>
<analysis_result analysis="peptideprophet">
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<parameter name="massd" value="-0.466282"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="26940" uncalibrated_precursor_neutral_mass="673.3756" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26940.26940.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26940" end_scan="26940" index="12067" precursor_neutral_mass="673.3752" retention_time_sec="1263.5936">
<search_result>
<search_hit peptide="ASGLAAGK" massdiff="-6.7138671875E-4" calc_neutral_pep_mass="673.37585" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Trifunctional purine biosynthetic protein adenosine-3 OS=Homo sapiens OX=9606 GN=GART PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="11" protein="sp|P22102|PUR2_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="22.089"/>
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<search_score name="expect" value="2.846020e-01"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
<search_hit peptide="SYTSGPGSR" massdiff="-0.00164794921875" calc_neutral_pep_mass="910.4144" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Keratin, type II cytoskeletal 8 OS=Homo sapiens OX=9606 GN=KRT8 PE=1 SV=7" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|P05787|K2C8_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="13.063"/>
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<search_score name="expect" value="1.795807e-01"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="26949" uncalibrated_precursor_neutral_mass="1013.5978" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26949.26949.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26949" end_scan="26949" index="12076" precursor_neutral_mass="1013.5976" retention_time_sec="1263.9263">
<search_result>
<search_hit peptide="RIIEAKER" massdiff="-5.4931640625E-4" calc_neutral_pep_mass="1013.59814" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nck-associated protein 1-like OS=Homo sapiens OX=9606 GN=NCKAP1L PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="rev_sp|P55160|NCKPL_HUMAN" peptide_prev_aa="F" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="EQQALSR" massdiff="-0.00128173828125" calc_neutral_pep_mass="830.4246" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Procollagen galactosyltransferase 1 OS=Homo sapiens OX=9606 GN=COLGALT1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q8NBJ5|GT251_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="11.818"/>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="26951" uncalibrated_precursor_neutral_mass="715.39716" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.26951.26951.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26951" end_scan="26951" index="12078" precursor_neutral_mass="715.3975" retention_time_sec="1264.0">
<search_result>
<search_hit peptide="QGVVGTR" massdiff="-1.220703125E-4" calc_neutral_pep_mass="715.39764" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone acetyltransferase p300 OS=Homo sapiens OX=9606 GN=EP300 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="5" protein="rev_sp|Q09472|EP300_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="26953" uncalibrated_precursor_neutral_mass="1052.4819" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26953.26953.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26953" end_scan="26953" index="12080" precursor_neutral_mass="1052.4819" retention_time_sec="1264.0739">
<search_result>
<search_hit peptide="NPTSDSHPAK" massdiff="-0.0067138671875" calc_neutral_pep_mass="1052.4886" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein AKNAD1 OS=Homo sapiens OX=9606 GN=AKNAD1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q5T1N1|AKND1_HUMAN" peptide_prev_aa="S" is_rejected="0">
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</search_score_summary>
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<spectrum_query start_scan="26960" uncalibrated_precursor_neutral_mass="886.54865" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26960.26960.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26960" end_scan="26960" index="12086" precursor_neutral_mass="886.5479" retention_time_sec="1264.4777">
<search_result>
<search_hit peptide="KKEELLK" massdiff="-7.9345703125E-4" calc_neutral_pep_mass="886.5487" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL29 OS=Homo sapiens OX=9606 GN=RPL35 PE=1 SV=2" num_tot_proteins="5" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P42766|RL35_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Large ribosomal subunit protein eL19 OS=Homo sapiens OX=9606 GN=RPL19 PE=1 SV=1" protein="sp|P84098|RL19_HUMAN" peptide_prev_aa="A" peptide_next_aa="T" num_tol_term="0"/>
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<alternative_protein protein_descr="Inositol 1,4,5-trisphosphate receptor type 3 OS=Homo sapiens OX=9606 GN=ITPR3 PE=1 SV=2" protein="sp|Q14573|ITPR3_HUMAN" peptide_prev_aa="Q" peptide_next_aa="T" num_tol_term="0"/>
<alternative_protein protein_descr="Inositol 1,4,5-trisphosphate receptor type 1 OS=Homo sapiens OX=9606 GN=ITPR1 PE=1 SV=3" protein="sp|Q14643|ITPR1_HUMAN" peptide_prev_aa="Q" peptide_next_aa="T" num_tol_term="0"/>
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<search_result>
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<modification_info modified_peptide="IVGCSVHK">
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<spectrum_query start_scan="26966" uncalibrated_precursor_neutral_mass="793.43414" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26966.26966.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26966" end_scan="26966" index="12092" precursor_neutral_mass="793.4336" retention_time_sec="1264.6993">
<search_result>
<search_hit peptide="GAYLKDK" massdiff="2.44140625E-4" calc_neutral_pep_mass="793.43335" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="FAST kinase domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TBRG4 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q969Z0|FAKD4_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="26969" uncalibrated_precursor_neutral_mass="882.4489" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.26969.26969.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=26969" end_scan="26969" index="12095" precursor_neutral_mass="882.452" retention_time_sec="1264.8097">
<search_result>
<search_hit peptide="ILCAHGGR" massdiff="0.00262451171875" calc_neutral_pep_mass="882.4494" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens OX=9606 GN=ZC3HAV1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|Q7Z2W4|ZCCHV_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="ILCAHGGR">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<search_result>
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<modification_info modified_peptide="TFCPAHK">
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Tubulin alpha-3D chain OS=Homo sapiens OX=9606 GN=TUBA3D PE=1 SV=1" protein="sp|P0DPH8|TBA3D_HUMAN" peptide_prev_aa="K" peptide_next_aa="G" num_tol_term="0"/>
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<spectrum_query start_scan="29024" uncalibrated_precursor_neutral_mass="807.4126" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.29024.29024.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=29024" end_scan="29024" index="14033" precursor_neutral_mass="807.41174" retention_time_sec="1353.5693">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="GCHLEGVAGHK">
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<spectrum_query start_scan="29154" uncalibrated_precursor_neutral_mass="862.47675" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.29154.29154.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=29154" end_scan="29154" index="14153" precursor_neutral_mass="862.47614" retention_time_sec="1359.2228">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="29155" uncalibrated_precursor_neutral_mass="917.4572" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.29155.29155.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=29155" end_scan="29155" index="14154" precursor_neutral_mass="917.45795" retention_time_sec="1359.2594">
<search_result>
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</search_score_summary>
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</analysis_result>
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<spectrum_query start_scan="29162" uncalibrated_precursor_neutral_mass="732.3685" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.29162.29162.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=29162" end_scan="29162" index="14161" precursor_neutral_mass="732.36505" retention_time_sec="1359.5168">
<search_result>
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<alternative_protein protein_descr="ATP synthase F(0) complex subunit C2, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5MC2 PE=1 SV=1" protein="sp|Q06055|AT5G2_HUMAN" peptide_prev_aa="R" peptide_next_aa="F" num_tol_term="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="AAQSAPK" massdiff="1.220703125E-4" calc_neutral_pep_mass="713.37085" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Chromatin target of PRMT1 protein OS=Homo sapiens OX=9606 GN=CHTOP PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|Q9Y3Y2|CHTOP_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="IECDDKGDGSCDVR" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1624.6456" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Filamin-A OS=Homo sapiens OX=9606 GN=FLNA PE=1 SV=4" num_tot_proteins="2" tot_num_ions="26" hit_rank="1" num_matched_ions="10" protein="sp|P21333|FLNA_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<modification_info modified_peptide="IECDDKGDGSCDVR">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Spliceosome RNA helicase DDX39B OS=Homo sapiens OX=9606 GN=DDX39B PE=1 SV=1" protein="sp|Q13838|DX39B_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_hit peptide="VVLSSQDKDK" massdiff="2.44140625E-4" calc_neutral_pep_mass="1117.5978" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="BOS complex subunit NOMO3 OS=Homo sapiens OX=9606 GN=NOMO3 PE=1 SV=2" num_tot_proteins="3" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|P69849|NOMO3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="30095" uncalibrated_precursor_neutral_mass="877.4209" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.30095.30095.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=30095" end_scan="30095" index="15050" precursor_neutral_mass="877.42035" retention_time_sec="1399.7545">
<search_result>
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<spectrum_query start_scan="30096" uncalibrated_precursor_neutral_mass="1022.4825" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.30096.30096.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=30096" end_scan="30096" index="15051" precursor_neutral_mass="1022.4813" retention_time_sec="1399.7915">
<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="KACTYIR" massdiff="-0.00128173828125" calc_neutral_pep_mass="910.4695" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Homo sapiens OX=9606 GN=RPN2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|P04844|RPN2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_hit peptide="AAVDYQK" massdiff="3.662109375E-4" calc_neutral_pep_mass="793.397" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="S-adenosylmethionine synthase isoform type-2 OS=Homo sapiens OX=9606 GN=MAT2A PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P31153|METK2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="TSTGAPAAIKK" massdiff="9.765625E-4" calc_neutral_pep_mass="1043.5974" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Macrophage-capping protein OS=Homo sapiens OX=9606 GN=CAPG PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="sp|P40121|CAPG_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="30856" uncalibrated_precursor_neutral_mass="839.4032" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.30856.30856.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=30856" end_scan="30856" index="15767" precursor_neutral_mass="839.4016" retention_time_sec="1432.5365">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="ACVEAPK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="TLVVHEK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="824.4756" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Superoxide dismutase [Cu-Zn] OS=Homo sapiens OX=9606 GN=SOD1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P00441|SODC_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="PANKQEDEVMR" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1315.6189" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="9" protein="sp|O15145|ARPC3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="ESDFEHR" massdiff="-7.32421875E-4" calc_neutral_pep_mass="918.3831" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Rho GTPase-activating protein 32 OS=Homo sapiens OX=9606 GN=ARHGAP32 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|A7KAX9|RHG32_HUMAN" peptide_prev_aa="H" is_rejected="0">
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="31675" uncalibrated_precursor_neutral_mass="874.51306" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.31675.31675.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=31675" end_scan="31675" index="16541" precursor_neutral_mass="874.5127" retention_time_sec="1467.7896">
<search_result>
<search_hit peptide="THVLLHR" massdiff="-0.00103759765625" calc_neutral_pep_mass="874.51373" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger and SCAN domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZSCAN10 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q96SZ4|ZSC10_HUMAN" peptide_prev_aa="G" is_rejected="0">
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<search_result>
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<mod_aminoacid_mass mass="97.01634" position="1"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="31680" uncalibrated_precursor_neutral_mass="793.3622" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.31680.31680.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=31680" end_scan="31680" index="16546" precursor_neutral_mass="793.3629" retention_time_sec="1467.9741">
<search_result>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="31685" uncalibrated_precursor_neutral_mass="910.56006" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.31685.31685.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=31685" end_scan="31685" index="16551" precursor_neutral_mass="910.55927" retention_time_sec="1468.1582">
<search_result>
<search_hit peptide="QKLGIPQK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="910.56" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein MCM10 homolog OS=Homo sapiens OX=9606 GN=MCM10 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|Q7L590|MCM10_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="31691" uncalibrated_precursor_neutral_mass="818.3702" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.31691.31691.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=31691" end_scan="31691" index="16556" precursor_neutral_mass="818.3718" retention_time_sec="1468.5256">
<search_result>
<search_hit peptide="DACLNAR" massdiff="0.0013427734375" calc_neutral_pep_mass="818.3705" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens OX=9606 GN=ATP2A2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P16615|AT2A2_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="DACLNAR">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="31692" uncalibrated_precursor_neutral_mass="844.42975" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.31692.31692.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=31692" end_scan="31692" index="16557" precursor_neutral_mass="844.4291" retention_time_sec="1468.5626">
<search_result>
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<search_result>
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<search_result>
<search_hit peptide="LPDKDCR" massdiff="6.7138671875E-4" calc_neutral_pep_mass="902.428" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cofilin-1 OS=Homo sapiens OX=9606 GN=CFL1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P23528|COF1_HUMAN" peptide_prev_aa="M" is_rejected="0">
<modification_info modified_peptide="LPDKDCR">
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="KNWQNVR" massdiff="-3.0517578125E-4" calc_neutral_pep_mass="943.4988" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL1 OS=Homo sapiens OX=9606 GN=RPL10A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P62906|RL10A_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<search_result>
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<spectrum_query start_scan="32281" uncalibrated_precursor_neutral_mass="947.56573" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32281.32281.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32281" end_scan="32281" index="17109" precursor_neutral_mass="947.5643" retention_time_sec="1493.8457">
<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="HFNAPSHVR" massdiff="0.0" calc_neutral_pep_mass="1063.5311" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ribosomal protein uL24-like OS=Homo sapiens OX=9606 GN=RPL26L1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|Q9UNX3|RL26L_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="AYGGSMCAK">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="ACAEALR">
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</modification_info>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4" protein="sp|P13797|PLST_HUMAN" peptide_prev_aa="K" peptide_next_aa="H" num_tol_term="0"/>
<modification_info modified_peptide="ALENDPDCR">
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<search_result>
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<search_result>
<search_hit peptide="GATYGKPVHHGVNQLK" massdiff="-0.001708984375" calc_neutral_pep_mass="1704.9059" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL15 OS=Homo sapiens OX=9606 GN=RPL15 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="17" protein="sp|P61313|RL15_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<spectrum_query start_scan="32371" uncalibrated_precursor_neutral_mass="1483.7632" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.32371.32371.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32371" end_scan="32371" index="17194" precursor_neutral_mass="1483.7628" retention_time_sec="1497.7799">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="32389" uncalibrated_precursor_neutral_mass="1511.7794" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.32389.32389.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32389" end_scan="32389" index="17211" precursor_neutral_mass="1511.7778" retention_time_sec="1498.59">
<search_result>
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<spectrum_query start_scan="32390" uncalibrated_precursor_neutral_mass="1030.5143" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32390.32390.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32390" end_scan="32390" index="17212" precursor_neutral_mass="1030.5149" retention_time_sec="1498.627">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="TYGKPVHHGVNQLK" massdiff="3.662109375E-4" calc_neutral_pep_mass="1576.8473" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL15 OS=Homo sapiens OX=9606 GN=RPL15 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="14" protein="sp|P61313|RL15_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="IHMGSCAENTAK" massdiff="0.00244140625" calc_neutral_pep_mass="1317.5806" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Acetyl-CoA acetyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=ACAT1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|P24752|THIL_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="32411" uncalibrated_precursor_neutral_mass="773.4289" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32411.32411.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32411" end_scan="32411" index="17232" precursor_neutral_mass="773.42896" retention_time_sec="1499.546">
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<search_result>
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<spectrum_query start_scan="32447" uncalibrated_precursor_neutral_mass="873.49023" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32447.32447.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32447" end_scan="32447" index="17267" precursor_neutral_mass="873.491" retention_time_sec="1501.026">
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<search_hit peptide="KEKVNEK" massdiff="-9.1552734375E-4" calc_neutral_pep_mass="873.49194" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="CSC1-like protein 2 OS=Homo sapiens OX=9606 GN=TMEM63B PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q5T3F8|CSCL2_HUMAN" peptide_prev_aa="E" is_rejected="0">
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<search_result>
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<modification_info modified_peptide="VIVCNTK">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32453" uncalibrated_precursor_neutral_mass="802.3981" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32453.32453.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32453" end_scan="32453" index="17272" precursor_neutral_mass="802.3933" retention_time_sec="1501.3938">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="32455" uncalibrated_precursor_neutral_mass="743.4189" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.32455.32455.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32455" end_scan="32455" index="17274" precursor_neutral_mass="743.4165" retention_time_sec="1501.4675">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="32461" uncalibrated_precursor_neutral_mass="1775.8511" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.32461.32461.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32461" end_scan="32461" index="17280" precursor_neutral_mass="1775.8547" retention_time_sec="1501.6891">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="32463" uncalibrated_precursor_neutral_mass="1775.8542" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32463.32463.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32463" end_scan="32463" index="17282" precursor_neutral_mass="1775.8523" retention_time_sec="1501.7625">
<search_result>
<search_hit peptide="RGEEGHDPKEPEQLR" massdiff="-0.002685546875" calc_neutral_pep_mass="1775.855" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="5" protein="sp|P51991|ROA3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="32469" uncalibrated_precursor_neutral_mass="1189.596" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32469.32469.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32469" end_scan="32469" index="17288" precursor_neutral_mass="1189.5944" retention_time_sec="1501.984">
<search_result>
<search_hit peptide="TQETLSQAGQK" massdiff="6.103515625E-4" calc_neutral_pep_mass="1189.5938" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Tumor protein D54 OS=Homo sapiens OX=9606 GN=TPD52L2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="10" protein="sp|O43399|TPD54_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="32474" uncalibrated_precursor_neutral_mass="1170.621" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.32474.32474.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32474" end_scan="32474" index="17292" precursor_neutral_mass="1170.6179" retention_time_sec="1502.3022">
<search_result>
<search_hit peptide="KTVGVEPAADGK" massdiff="-0.0064697265625" calc_neutral_pep_mass="1170.6244" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 GN=RPL28 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="10" protein="sp|P46779|RL28_HUMAN" peptide_prev_aa="R" is_rejected="0">
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</search_score_summary>
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<spectrum_query start_scan="32476" uncalibrated_precursor_neutral_mass="1060.4896" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32476.32476.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32476" end_scan="32476" index="17294" precursor_neutral_mass="1060.4961" retention_time_sec="1502.376">
<search_result>
<search_hit peptide="GPPPSYGGSSR" massdiff="0.00244140625" calc_neutral_pep_mass="1060.4937" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="RNA-binding motif protein, X chromosome OS=Homo sapiens OX=9606 GN=RBMX PE=1 SV=3" num_tot_proteins="2" tot_num_ions="20" hit_rank="1" num_matched_ions="7" protein="sp|P38159|RBMX_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<search_result>
<search_hit peptide="VTYTEHAKR" massdiff="0.00439453125" calc_neutral_pep_mass="1103.5723" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H4 OS=Homo sapiens OX=9606 GN=H4C1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|P62805|H4_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<search_result>
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<search_result>
<search_hit peptide="GPPPSYGGSSR" massdiff="2.44140625E-4" calc_neutral_pep_mass="1060.4937" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="RNA-binding motif protein, X chromosome OS=Homo sapiens OX=9606 GN=RBMX PE=1 SV=3" num_tot_proteins="2" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|P38159|RBMX_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="WTTEQQQR" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1075.5046" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="ADP-ribosylation factor-like protein 6-interacting protein 1 OS=Homo sapiens OX=9606 GN=ARL6IP1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|Q15041|AR6P1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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</search_score_summary>
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<search_result>
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<modification_info modified_peptide="TCNCETEDYGEK">
<mod_aminoacid_mass mass="160.03065" position="2"/>
<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
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<search_score name="expect" value="2.852659e-03"/>
<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="32587" uncalibrated_precursor_neutral_mass="862.4224" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32587.32587.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32587" end_scan="32587" index="17401" precursor_neutral_mass="862.4224" retention_time_sec="1507.0555">
<search_result>
<search_hit peptide="LLSGEGKC" massdiff="5.4931640625E-4" calc_neutral_pep_mass="862.4219" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Vertnin OS=Homo sapiens OX=9606 GN=VRTN PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q9H8Y1|VRTN_HUMAN" peptide_prev_aa="F" is_rejected="0">
<modification_info modified_peptide="LLSGEGKC">
<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="KSCPNPGEIR">
<mod_aminoacid_mass mass="160.03065" position="3"/>
</modification_info>
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<search_result>
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</peptideprophet_result>
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<spectrum_query start_scan="32598" uncalibrated_precursor_neutral_mass="1215.622" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32598.32598.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32598" end_scan="32598" index="17410" precursor_neutral_mass="1215.62" retention_time_sec="1507.606">
<search_result>
<search_hit peptide="RQVDQLTNDK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1215.6207" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Vimentin OS=Homo sapiens OX=9606 GN=VIM PE=1 SV=4" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="17" protein="sp|P08670|VIME_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="32602" uncalibrated_precursor_neutral_mass="884.52106" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32602.32602.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32602" end_scan="32602" index="17414" precursor_neutral_mass="884.52325" retention_time_sec="1507.7535">
<search_result>
<search_hit peptide="IHGVGFKK" massdiff="6.103515625E-5" calc_neutral_pep_mass="884.5232" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL31 OS=Homo sapiens OX=9606 GN=RPL31 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|P62899|RL31_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="YDGNSLK" massdiff="-0.0010986328125" calc_neutral_pep_mass="795.3763" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="WD repeat domain phosphoinositide-interacting protein 1 OS=Homo sapiens OX=9606 GN=WIPI1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q5MNZ9|WIPI1_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<spectrum_query start_scan="32609" uncalibrated_precursor_neutral_mass="944.49316" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32609.32609.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32609" end_scan="32609" index="17421" precursor_neutral_mass="944.49115" retention_time_sec="1508.0117">
<search_result>
<search_hit peptide="AGGSAALSPSK" massdiff="-0.00152587890625" calc_neutral_pep_mass="944.4927" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.10 OS=Homo sapiens OX=9606 GN=H1-10 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="12" protein="sp|Q92522|H1X_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-L OS=Homo sapiens OX=9606 GN=H2BC13 PE=1 SV=3" protein="sp|Q99880|H2B1L_HUMAN" peptide_prev_aa="Q" peptide_next_aa="A" num_tol_term="0"/>
<search_score name="hyperscore" value="17.888"/>
<search_score name="nextscore" value="11.633"/>
<search_score name="expect" value="8.952806e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.993075" all_ntt_prob="(0.993075,0.993075,0.993075)">
<search_score_summary>
<parameter name="fval" value="0.733328"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.821999"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32620" uncalibrated_precursor_neutral_mass="1103.5735" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32620.32620.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32620" end_scan="32620" index="17431" precursor_neutral_mass="1103.5767" retention_time_sec="1508.5613">
<search_result>
<search_hit peptide="VTYTEHAKR" massdiff="0.00439453125" calc_neutral_pep_mass="1103.5723" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H4 OS=Homo sapiens OX=9606 GN=H4C1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P62805|H4_HUMAN" peptide_prev_aa="A" is_rejected="0">
<search_score name="hyperscore" value="20.164"/>
<search_score name="nextscore" value="12.095"/>
<search_score name="expect" value="8.198614e-04"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999878" all_ntt_prob="(0.999878,0.999878,0.999878)">
<search_score_summary>
<parameter name="fval" value="1.651140"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="3.982096"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32621" uncalibrated_precursor_neutral_mass="1541.7241" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.32621.32621.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32621" end_scan="32621" index="17432" precursor_neutral_mass="1541.7217" retention_time_sec="1508.5981">
<search_result>
<search_hit peptide="HSEAATAQREEWK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1541.7222" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens OX=9606 GN=HNRNPD PE=1 SV=1" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="17" protein="sp|Q14103|HNRPD_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="32.273"/>
<search_score name="nextscore" value="14.404"/>
<search_score name="expect" value="2.459291e-07"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="1.000000" all_ntt_prob="(1.000000,1.000000,1.000000)">
<search_score_summary>
<parameter name="fval" value="3.331210"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.316712"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32624" uncalibrated_precursor_neutral_mass="1069.4861" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32624.32624.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32624" end_scan="32624" index="17435" precursor_neutral_mass="1069.4845" retention_time_sec="1508.7086">
<search_result>
<search_hit peptide="QSVTYACNK" massdiff="-0.001708984375" calc_neutral_pep_mass="1069.4862" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Complement decay-accelerating factor OS=Homo sapiens OX=9606 GN=CD55 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|P08174|DAF_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="QSVTYACNK">
<mod_aminoacid_mass mass="160.03065" position="7"/>
</modification_info>
<search_score name="hyperscore" value="21.036"/>
<search_score name="nextscore" value="14.266"/>
<search_score name="expect" value="2.945724e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999828" all_ntt_prob="(0.999828,0.999828,0.999828)">
<search_score_summary>
<parameter name="fval" value="1.572210"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.597949"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32625" uncalibrated_precursor_neutral_mass="1333.6084" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32625.32625.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32625" end_scan="32625" index="17436" precursor_neutral_mass="1333.6083" retention_time_sec="1508.7455">
<search_result>
<search_hit peptide="SSNADAEEKLDR" massdiff="-0.0025634765625" calc_neutral_pep_mass="1333.6108" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Polyglutamine-binding protein 1 OS=Homo sapiens OX=9606 GN=PQBP1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="10" protein="sp|O60828|PQBP1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="21.579"/>
<search_score name="nextscore" value="10.658"/>
<search_score name="expect" value="7.721690e-07"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999997" all_ntt_prob="(0.999997,0.999997,0.999997)">
<search_score_summary>
<parameter name="fval" value="2.473430"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.922207"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32628" uncalibrated_precursor_neutral_mass="1215.6202" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.32628.32628.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32628" end_scan="32628" index="17439" precursor_neutral_mass="1215.617" retention_time_sec="1508.8563">
<search_result>
<search_hit peptide="RQVDQLTNDK" massdiff="-0.0037841796875" calc_neutral_pep_mass="1215.6207" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Vimentin OS=Homo sapiens OX=9606 GN=VIM PE=1 SV=4" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|P08670|VIME_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="19.23"/>
<search_score name="nextscore" value="12.712"/>
<search_score name="expect" value="3.199641e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999634" all_ntt_prob="(0.999634,0.999634,0.999634)">
<search_score_summary>
<parameter name="fval" value="1.398880"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-3.112961"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32632" uncalibrated_precursor_neutral_mass="803.4015" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.32632.32632.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32632" end_scan="32632" index="17443" precursor_neutral_mass="803.401" retention_time_sec="1509.0038">
<search_result>
<search_hit peptide="PDTGISSK" massdiff="-0.00146484375" calc_neutral_pep_mass="803.40247" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" num_tot_proteins="15" tot_num_ions="14" hit_rank="1" num_matched_ions="12" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="H" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type F-S OS=Homo sapiens OX=9606 GN=H2BC12L PE=1 SV=2" protein="sp|P57053|H2BFS_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-E OS=Homo sapiens OX=9606 GN=H2BC21 PE=1 SV=3" protein="sp|Q16778|H2B2E_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-L OS=Homo sapiens OX=9606 GN=H2BC13 PE=1 SV=3" protein="sp|Q99880|H2B1L_HUMAN" peptide_prev_aa="H" peptide_next_aa="A" num_tol_term="0"/>
<search_score name="hyperscore" value="23.972"/>
<search_score name="nextscore" value="15.988"/>
<search_score name="expect" value="6.505205e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999271" all_ntt_prob="(0.999271,0.999271,0.999271)">
<search_score_summary>
<parameter name="fval" value="1.241940"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.823300"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32635" uncalibrated_precursor_neutral_mass="1181.5675" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32635.32635.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32635" end_scan="32635" index="17446" precursor_neutral_mass="1181.5662" retention_time_sec="1509.1145">
<search_result>
<search_hit peptide="KTNTSCGISSK" massdiff="-0.0048828125" calc_neutral_pep_mass="1181.571" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cap-specific mRNA (nucleoside-2&apos;-O-)-methyltransferase 2 OS=Homo sapiens OX=9606 GN=CMTR2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q8IYT2|CMTR2_HUMAN" peptide_prev_aa="W" is_rejected="0">
<modification_info modified_peptide="KTNTSCGISSK">
<mod_aminoacid_mass mass="160.03065" position="6"/>
</modification_info>
<search_score name="hyperscore" value="14.149"/>
<search_score name="nextscore" value="13.575"/>
<search_score name="expect" value="3.616968e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.657081" all_ntt_prob="(0.657081,0.657081,0.657081)">
<search_score_summary>
<parameter name="fval" value="-0.207978"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-4.132475"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32638" uncalibrated_precursor_neutral_mass="988.46924" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32638.32638.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32638" end_scan="32638" index="17449" precursor_neutral_mass="988.4707" retention_time_sec="1509.2378">
<search_result>
<search_hit peptide="HNYEGTLR" massdiff="-0.00189208984375" calc_neutral_pep_mass="988.4726" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens OX=9606 GN=USP7 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|Q93009|UBP7_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="17.383"/>
<search_score name="nextscore" value="12.696"/>
<search_score name="expect" value="4.302566e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.993327" all_ntt_prob="(0.993327,0.993327,0.993327)">
<search_score_summary>
<parameter name="fval" value="0.741549"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.914155"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="32640" uncalibrated_precursor_neutral_mass="1150.5598" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.32640.32640.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=32640" end_scan="32640" index="17450" precursor_neutral_mass="1150.5599" retention_time_sec="1509.5619">
<search_result>
<search_hit peptide="QVHPDTGISSK" massdiff="-0.001953125" calc_neutral_pep_mass="1150.5619" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" num_tot_proteins="15" tot_num_ions="20" hit_rank="1" num_matched_ions="15" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type F-S OS=Homo sapiens OX=9606 GN=H2BC12L PE=1 SV=2" protein="sp|P57053|H2BFS_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-E OS=Homo sapiens OX=9606 GN=H2BC21 PE=1 SV=3" protein="sp|Q16778|H2B2E_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-L OS=Homo sapiens OX=9606 GN=H2BC13 PE=1 SV=3" protein="sp|Q99880|H2B1L_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<modification_info modified_peptide="Q[111]VHPDTGISSK">
<mod_aminoacid_mass mass="111.032074" position="1"/>
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<search_result>
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<mod_aminoacid_mass mass="160.03065" position="3"/>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="AATTGSGVK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="832.4291" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens OX=9606 GN=UBE2V1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|Q13404|UB2V1_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<spectrum_query start_scan="34440" uncalibrated_precursor_neutral_mass="962.5306" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.34440.34440.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=34440" end_scan="34440" index="19111" precursor_neutral_mass="962.5301" retention_time_sec="1587.3555">
<search_result>
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<spectrum_query start_scan="34444" uncalibrated_precursor_neutral_mass="1234.6063" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.34444.34444.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=34444" end_scan="34444" index="19115" precursor_neutral_mass="1234.6052" retention_time_sec="1587.5034">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="TYDKLCK">
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="LQSEPESIRK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1185.6353" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Clathrin light chain A OS=Homo sapiens OX=9606 GN=CLTA PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="6" protein="sp|P09496|CLCA_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="37218" uncalibrated_precursor_neutral_mass="753.40375" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37218.37218.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37218" end_scan="37218" index="21681" precursor_neutral_mass="753.40155" retention_time_sec="1707.2543">
<search_result>
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<spectrum_query start_scan="37219" uncalibrated_precursor_neutral_mass="1011.44574" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37219.37219.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37219" end_scan="37219" index="21682" precursor_neutral_mass="1011.4476" retention_time_sec="1707.2911">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_score name="hyperscore" value="22.358"/>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="37248" uncalibrated_precursor_neutral_mass="946.5331" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37248.37248.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37248" end_scan="37248" index="21709" precursor_neutral_mass="946.5308" retention_time_sec="1708.6243">
<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<parameter name="massd" value="-0.494249"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="37252" uncalibrated_precursor_neutral_mass="954.5071" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.37252.37252.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37252" end_scan="37252" index="21713" precursor_neutral_mass="954.5049" retention_time_sec="1708.7719">
<search_result>
<search_hit peptide="IAVHCTVR" massdiff="-0.0020751953125" calc_neutral_pep_mass="954.50696" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL5 OS=Homo sapiens OX=9606 GN=RPL11 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|P62913|RL11_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="IAVHCTVR">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="37254" uncalibrated_precursor_neutral_mass="1167.5839" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.37254.37254.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37254" end_scan="37254" index="21715" precursor_neutral_mass="1167.5853" retention_time_sec="1708.8456">
<search_result>
<search_hit peptide="AELHQLSGGEK" massdiff="-0.0029296875" calc_neutral_pep_mass="1167.5883" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Homo sapiens OX=9606 GN=ABCG2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="sp|Q9UNQ0|ABCG2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="37259" uncalibrated_precursor_neutral_mass="733.2889" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.37259.37259.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37259" end_scan="37259" index="21720" precursor_neutral_mass="733.2866" retention_time_sec="1709.0302">
<search_result>
<search_hit peptide="CGVCGKA" massdiff="-0.00213623046875" calc_neutral_pep_mass="733.28876" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transcriptional repressor scratch 1 OS=Homo sapiens OX=9606 GN=SCRT1 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="sp|Q9BWW7|SCRT1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<modification_info modified_peptide="C[143]GVCGKA">
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<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="37261" uncalibrated_precursor_neutral_mass="1068.558" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.37261.37261.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37261" end_scan="37261" index="21722" precursor_neutral_mass="1068.555" retention_time_sec="1709.1039">
<search_result>
<search_hit peptide="NIIHGSDSVK" massdiff="-0.001220703125" calc_neutral_pep_mass="1068.5563" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative nucleoside diphosphate kinase OS=Homo sapiens OX=9606 GN=NME2P1 PE=5 SV=1" num_tot_proteins="2" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|O60361|NDK8_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Nucleoside diphosphate kinase B OS=Homo sapiens OX=9606 GN=NME2 PE=1 SV=1" protein="sp|P22392|NDKB_HUMAN" peptide_prev_aa="R" peptide_next_aa="S" num_tol_term="0"/>
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<search_score name="expect" value="5.538940e-04"/>
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="37262" uncalibrated_precursor_neutral_mass="807.41394" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37262.37262.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37262" end_scan="37262" index="21723" precursor_neutral_mass="807.41174" retention_time_sec="1709.1405">
<search_result>
<search_hit peptide="ANAEYIK" massdiff="-9.1552734375E-4" calc_neutral_pep_mass="807.41266" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Serine/threonine-protein kinase VRK1 OS=Homo sapiens OX=9606 GN=VRK1 PE=1 SV=1" num_tot_proteins="3" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q99986|VRK1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Acetyl-CoA carboxylase 2 OS=Homo sapiens OX=9606 GN=ACACB PE=1 SV=3" protein="sp|O00763|ACACB_HUMAN" peptide_prev_aa="K" peptide_next_aa="M" num_tol_term="0"/>
<alternative_protein protein_descr="Acetyl-CoA carboxylase 1 OS=Homo sapiens OX=9606 GN=ACACA PE=1 SV=2" protein="sp|Q13085|ACACA_HUMAN" peptide_prev_aa="K" peptide_next_aa="M" num_tol_term="0"/>
<search_score name="hyperscore" value="14.485"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="37264" uncalibrated_precursor_neutral_mass="848.4028" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.37264.37264.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37264" end_scan="37264" index="21725" precursor_neutral_mass="848.40155" retention_time_sec="1709.2144">
<search_result>
<search_hit peptide="TYTEHAK" massdiff="-0.00128173828125" calc_neutral_pep_mass="848.40283" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H4 OS=Homo sapiens OX=9606 GN=H4C1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P62805|H4_HUMAN" peptide_prev_aa="V" is_rejected="0">
<search_score name="hyperscore" value="21.765"/>
<search_score name="nextscore" value="14.809"/>
<search_score name="expect" value="4.988492e-03"/>
<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="STYIESSTK" massdiff="-9.765625E-4" calc_neutral_pep_mass="1014.48694" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative lipid scramblase CLPTM1 OS=Homo sapiens OX=9606 GN=CLPTM1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|O96005|CLPT1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="14.887"/>
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<search_score name="expect" value="3.105540e-03"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="QGPGPGGPK" massdiff="0.001220703125" calc_neutral_pep_mass="776.3817" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Splicing factor, proline- and glutamine-rich OS=Homo sapiens OX=9606 GN=SFPQ PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|P23246|SFPQ_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="Q[111]GPGPGGPK">
<mod_aminoacid_mass mass="111.032074" position="1"/>
</modification_info>
<search_score name="hyperscore" value="17.025"/>
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<search_score name="expect" value="2.404958e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999392" all_ntt_prob="(0.999392,0.999392,0.999392)">
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<parameter name="ntt" value="0"/>
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</search_score_summary>
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<spectrum_query start_scan="37269" uncalibrated_precursor_neutral_mass="757.4442" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37269.37269.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37269" end_scan="37269" index="21730" precursor_neutral_mass="757.44476" retention_time_sec="1709.3983">
<search_result>
<search_hit peptide="DAVRVAK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="757.4446" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Rho guanine nucleotide exchange factor 17 OS=Homo sapiens OX=9606 GN=ARHGEF17 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="sp|Q96PE2|ARHGH_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="7.934"/>
<search_score name="nextscore" value="6.171"/>
<search_score name="expect" value="2.397250e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.683766" all_ntt_prob="(0.683766,0.683766,0.683766)">
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="37272" uncalibrated_precursor_neutral_mass="908.4243" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.37272.37272.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37272" end_scan="37272" index="21732" precursor_neutral_mass="908.42267" retention_time_sec="1709.6531">
<search_result>
<search_hit peptide="TDEAAFQK" massdiff="-0.00128173828125" calc_neutral_pep_mass="908.42395" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein S100-A4 OS=Homo sapiens OX=9606 GN=S100A4 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="13" protein="sp|P26447|S10A4_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="expect" value="1.332792e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999807" all_ntt_prob="(0.999807,0.999807,0.999807)">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="37274" uncalibrated_precursor_neutral_mass="1192.5858" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.37274.37274.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37274" end_scan="37274" index="21734" precursor_neutral_mass="1192.5825" retention_time_sec="1709.7266">
<search_result>
<search_hit peptide="FGVQTDRQDK" massdiff="-9.765625E-4" calc_neutral_pep_mass="1192.5835" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Src substrate cortactin OS=Homo sapiens OX=9606 GN=CTTN PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="6" protein="sp|Q14247|SRC8_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="37276" uncalibrated_precursor_neutral_mass="1146.433" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37276.37276.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37276" end_scan="37276" index="21736" precursor_neutral_mass="1146.432" retention_time_sec="1709.8004">
<search_result>
<search_hit peptide="TCEESSFCK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1146.4321" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neutral alpha-glucosidase AB OS=Homo sapiens OX=9606 GN=GANAB PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|Q14697|GANAB_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="TCEESSFCK">
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<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
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<search_score name="expect" value="5.911160e-02"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="37278" uncalibrated_precursor_neutral_mass="1277.5317" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37278.37278.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37278" end_scan="37278" index="21738" precursor_neutral_mass="1277.5365" retention_time_sec="1709.8743">
<search_result>
<search_hit peptide="ARGDSEALDEES" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1277.537" peptide_next_aa="-" num_missed_cleavages="0" num_tol_term="0" protein_descr="Hepatoma-derived growth factor-related protein 2 OS=Homo sapiens OX=9606 GN=HDGFL2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="6" protein="sp|Q7Z4V5|HDGR2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="expect" value="6.840600e-01"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="37279" uncalibrated_precursor_neutral_mass="1167.5846" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.37279.37279.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=37279" end_scan="37279" index="21739" precursor_neutral_mass="1167.5881" retention_time_sec="1709.9109">
<search_result>
<search_hit peptide="AELHQLSGGEK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1167.5883" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Homo sapiens OX=9606 GN=ABCG2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="9" protein="sp|Q9UNQ0|ABCG2_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="15.278"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="38305" uncalibrated_precursor_neutral_mass="893.4498" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.38305.38305.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38305" end_scan="38305" index="22696" precursor_neutral_mass="893.4488" retention_time_sec="1754.1816">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="CKHFELGGDK">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="38594" uncalibrated_precursor_neutral_mass="864.44586" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38594.38594.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38594" end_scan="38594" index="22972" precursor_neutral_mass="864.44385" retention_time_sec="1766.6079">
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<search_hit peptide="CGESGHLAR" massdiff="1.8310546875E-4" calc_neutral_pep_mass="968.4134" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="CCHC-type zinc finger nucleic acid binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|P62633|CNBP_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="38627" uncalibrated_precursor_neutral_mass="1076.5889" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38627.38627.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38627" end_scan="38627" index="23003" precursor_neutral_mass="1076.5856" retention_time_sec="1767.9716">
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<search_hit peptide="PAKYDDIKK" massdiff="-9.765625E-4" calc_neutral_pep_mass="1076.5865" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens OX=9606 GN=GAPDH PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="15" protein="sp|P04406|G3P_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="38633" uncalibrated_precursor_neutral_mass="864.44525" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.38633.38633.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38633" end_scan="38633" index="23009" precursor_neutral_mass="864.4445" retention_time_sec="1768.1929">
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<search_hit peptide="AYAQGISR" massdiff="-7.9345703125E-4" calc_neutral_pep_mass="864.4453" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Citrate synthase, mitochondrial OS=Homo sapiens OX=9606 GN=CS PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|O75390|CISY_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="38636" uncalibrated_precursor_neutral_mass="805.4341" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38636.38636.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38636" end_scan="38636" index="23011" precursor_neutral_mass="805.43286" retention_time_sec="1768.4503">
<search_result>
<search_hit peptide="KPEGTFK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="805.43335" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein bL27m OS=Homo sapiens OX=9606 GN=MRPL27 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|Q9P0M9|RM27_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="38644" uncalibrated_precursor_neutral_mass="1080.5549" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38644.38644.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38644" end_scan="38644" index="23019" precursor_neutral_mass="1080.5557" retention_time_sec="1768.7456">
<search_result>
<search_hit peptide="RAYDIAGSTK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1080.5563" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA topoisomerase 2-alpha OS=Homo sapiens OX=9606 GN=TOP2A PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|P11388|TOP2A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="38668" uncalibrated_precursor_neutral_mass="854.3844" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38668.38668.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38668" end_scan="38668" index="23041" precursor_neutral_mass="854.3876" retention_time_sec="1769.7783">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="38672" uncalibrated_precursor_neutral_mass="1192.6296" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38672.38672.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38672" end_scan="38672" index="23045" precursor_neutral_mass="1192.6309" retention_time_sec="1769.9257">
<search_result>
<search_hit peptide="VTTGTSNTTAIK" massdiff="9.765625E-4" calc_neutral_pep_mass="1192.6299" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Retinoblastoma-binding protein 5 OS=Homo sapiens OX=9606 GN=RBBP5 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|Q15291|RBBP5_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="expect" value="2.045034e-03"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="38674" uncalibrated_precursor_neutral_mass="862.38226" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38674.38674.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38674" end_scan="38674" index="23047" precursor_neutral_mass="862.38226" retention_time_sec="1770.0">
<search_result>
<search_hit peptide="NGADPDFK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="862.3821" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein diaphanous homolog 1 OS=Homo sapiens OX=9606 GN=DIAPH1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|O60610|DIAP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="5.889066e-02"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="38677" uncalibrated_precursor_neutral_mass="790.4204" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38677.38677.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38677" end_scan="38677" index="23050" precursor_neutral_mass="790.41907" retention_time_sec="1770.1108">
<search_result>
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<search_score name="expect" value="7.592520e-01"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="38684" uncalibrated_precursor_neutral_mass="817.4187" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.38684.38684.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38684" end_scan="38684" index="23056" precursor_neutral_mass="817.41754" retention_time_sec="1770.5406">
<search_result>
<search_hit peptide="GITGVEDK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="817.41815" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transketolase OS=Homo sapiens OX=9606 GN=TKT PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="13" protein="sp|P29401|TKT_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="expect" value="1.433877e-02"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="38685" uncalibrated_precursor_neutral_mass="815.44977" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38685.38685.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38685" end_scan="38685" index="23057" precursor_neutral_mass="815.4489" retention_time_sec="1770.5773">
<search_result>
<search_hit peptide="EIQTAVR" massdiff="-0.00115966796875" calc_neutral_pep_mass="815.4501" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" num_tot_proteins="14" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type F-S OS=Homo sapiens OX=9606 GN=H2BC12L PE=1 SV=2" protein="sp|P57053|H2BFS_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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<spectrum_query start_scan="38689" uncalibrated_precursor_neutral_mass="1181.5447" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38689.38689.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38689" end_scan="38689" index="23061" precursor_neutral_mass="1181.5425" retention_time_sec="1770.725">
<search_result>
<search_hit peptide="GRSDYDGIGSR" massdiff="1.220703125E-4" calc_neutral_pep_mass="1181.5424" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="ATP-dependent RNA helicase DDX3X OS=Homo sapiens OX=9606 GN=DDX3X PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="12" protein="sp|O00571|DDX3X_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="EISITHHVK" massdiff="3.662109375E-4" calc_neutral_pep_mass="1062.5822" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens OX=9606 GN=RPS6KA1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q15418|KS6A1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</peptideprophet_result>
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<search_result>
<search_hit peptide="MDADDSR" massdiff="-3.0517578125E-4" calc_neutral_pep_mass="850.31274" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="ATP-dependent 6-phosphofructokinase, platelet type OS=Homo sapiens OX=9606 GN=PFKP PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="5" protein="sp|Q01813|PFKAP_HUMAN" peptide_prev_aa="-" is_rejected="0">
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<spectrum_query start_scan="38695" uncalibrated_precursor_neutral_mass="815.44977" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.38695.38695.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38695" end_scan="38695" index="23067" precursor_neutral_mass="815.44904" retention_time_sec="1770.9467">
<search_result>
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<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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</peptideprophet_result>
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</search_hit>
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<search_result>
<search_hit peptide="LGKHDVTCTVSGGGR" massdiff="-0.0010986328125" calc_neutral_pep_mass="1542.7572" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small ribosomal subunit protein uS9m OS=Homo sapiens OX=9606 GN=MRPS9 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="10" protein="sp|P82933|RT09_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="LGKHDVTCTVSGGGR">
<mod_aminoacid_mass mass="160.03065" position="8"/>
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<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999974" all_ntt_prob="(0.999974,0.999974,0.999974)">
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="38775" uncalibrated_precursor_neutral_mass="1694.6785" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38775.38775.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38775" end_scan="38775" index="23140" precursor_neutral_mass="1694.6763" retention_time_sec="1774.3335">
<search_result>
<search_hit peptide="NQGGYGGSSSSSSYGSGR" massdiff="0.9835205078125" calc_neutral_pep_mass="1693.6927" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein A1-like 3 OS=Homo sapiens OX=9606 GN=HNRNPA1L3 PE=4 SV=1" num_tot_proteins="2" tot_num_ions="34" hit_rank="1" num_matched_ions="9" protein="sp|A0A2R8Y4L2|RA1L3_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5" protein="sp|P09651|ROA1_HUMAN" peptide_prev_aa="R" peptide_next_aa="R" num_tol_term="0"/>
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<spectrum_query start_scan="38778" uncalibrated_precursor_neutral_mass="755.4539" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38778.38778.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38778" end_scan="38778" index="23142" precursor_neutral_mass="755.4532" retention_time_sec="1774.5881">
<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="KCTVDLLGK">
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<spectrum_query start_scan="38787" uncalibrated_precursor_neutral_mass="757.40765" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.38787.38787.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38787" end_scan="38787" index="23151" precursor_neutral_mass="757.4078" retention_time_sec="1774.92">
<search_result>
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<spectrum_query start_scan="38791" uncalibrated_precursor_neutral_mass="992.4458" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.38791.38791.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=38791" end_scan="38791" index="23155" precursor_neutral_mass="992.44464" retention_time_sec="1775.0674">
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<search_result>
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</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="39021" uncalibrated_precursor_neutral_mass="964.4986" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.39021.39021.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=39021" end_scan="39021" index="23373" precursor_neutral_mass="964.4997" retention_time_sec="1785.025">
<search_result>
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<search_result>
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<search_result>
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<mod_aminoacid_mass mass="160.03065" position="4"/>
<mod_aminoacid_mass mass="160.03065" position="11"/>
</modification_info>
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<search_result>
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<search_score name="hyperscore" value="9.559"/>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="AYLAGRA" massdiff="7.9345703125E-4" calc_neutral_pep_mass="720.39185" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Tetratricopeptide repeat protein 14 OS=Homo sapiens OX=9606 GN=TTC14 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="rev_sp|Q96N46|TTC14_HUMAN" peptide_prev_aa="T" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="AVTEQGHELSNEER" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1597.7332" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="14-3-3 protein beta/alpha OS=Homo sapiens OX=9606 GN=YWHAB PE=1 SV=3" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="13" protein="sp|P31946|1433B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_hit>
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<spectrum_query start_scan="39214" uncalibrated_precursor_neutral_mass="1062.5533" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.39214.39214.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=39214" end_scan="39214" index="23554" precursor_neutral_mass="1062.541" retention_time_sec="1793.3029">
<search_result>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="40659" uncalibrated_precursor_neutral_mass="937.5097" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40659.40659.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40659" end_scan="40659" index="24911" precursor_neutral_mass="937.5098" retention_time_sec="1855.5629">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="40661" uncalibrated_precursor_neutral_mass="928.42346" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40661.40661.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40661" end_scan="40661" index="24913" precursor_neutral_mass="928.427" retention_time_sec="1855.6367">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="40668" uncalibrated_precursor_neutral_mass="987.5378" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40668.40668.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40668" end_scan="40668" index="24919" precursor_neutral_mass="987.5356" retention_time_sec="1856.062">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="40669" uncalibrated_precursor_neutral_mass="831.4685" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40669.40669.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40669" end_scan="40669" index="24920" precursor_neutral_mass="831.47064" retention_time_sec="1856.0996">
<search_result>
<search_hit peptide="ITVTPSSK" massdiff="4.8828125E-4" calc_neutral_pep_mass="831.47015" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="BOS complex subunit NOMO3 OS=Homo sapiens OX=9606 GN=NOMO3 PE=1 SV=2" num_tot_proteins="3" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|P69849|NOMO3_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="BOS complex subunit NOMO1 OS=Homo sapiens OX=9606 GN=NOMO1 PE=1 SV=5" protein="sp|Q15155|NOMO1_HUMAN" peptide_prev_aa="K" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="BOS complex subunit NOMO2 OS=Homo sapiens OX=9606 GN=NOMO2 PE=1 SV=1" protein="sp|Q5JPE7|NOMO2_HUMAN" peptide_prev_aa="K" peptide_next_aa="E" num_tol_term="0"/>
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</peptideprophet_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="40671" uncalibrated_precursor_neutral_mass="886.49774" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40671.40671.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40671" end_scan="40671" index="24922" precursor_neutral_mass="886.4926" retention_time_sec="1856.1735">
<search_result>
<search_hit peptide="RQDLLSR" massdiff="-0.00579833984375" calc_neutral_pep_mass="886.4984" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Epiplakin OS=Homo sapiens OX=9606 GN=EPPK1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P58107|EPIPL_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="15.312"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="40672" uncalibrated_precursor_neutral_mass="690.35406" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.40672.40672.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40672" end_scan="40672" index="24923" precursor_neutral_mass="690.35455" retention_time_sec="1856.2103">
<search_result>
<search_hit peptide="TIGSADK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="690.3548" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Complement factor I OS=Homo sapiens OX=9606 GN=CFI PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="rev_sp|P05156|CFAI_HUMAN" peptide_prev_aa="C" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
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<search_result>
<search_hit peptide="GCEVVVSGK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="933.459" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small ribosomal subunit protein uS3 OS=Homo sapiens OX=9606 GN=RPS3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|P23396|RS3_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="GCEVVVSGK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="40677" uncalibrated_precursor_neutral_mass="948.53296" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40677.40677.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40677" end_scan="40677" index="24928" precursor_neutral_mass="948.53156" retention_time_sec="1856.3944">
<search_result>
<search_hit peptide="EVSTYIKK" massdiff="0.00360107421875" calc_neutral_pep_mass="948.52795" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Elongation factor 1-alpha 1 OS=Homo sapiens OX=9606 GN=EEF1A1 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="14" hit_rank="1" num_matched_ions="11" protein="sp|P68104|EF1A1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<modification_info modified_peptide="E[111]VSTYIKK">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</analysis_result>
</search_hit>
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<spectrum_query start_scan="40986" uncalibrated_precursor_neutral_mass="1107.572" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40986.40986.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40986" end_scan="40986" index="25214" precursor_neutral_mass="1107.5696" retention_time_sec="1869.6404">
<search_result>
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</search_hit>
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<spectrum_query start_scan="40988" uncalibrated_precursor_neutral_mass="915.5762" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40988.40988.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40988" end_scan="40988" index="25216" precursor_neutral_mass="915.57526" retention_time_sec="1869.7144">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="40989" uncalibrated_precursor_neutral_mass="848.429" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.40989.40989.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40989" end_scan="40989" index="25217" precursor_neutral_mass="848.42816" retention_time_sec="1869.7509">
<search_result>
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<spectrum_query start_scan="40993" uncalibrated_precursor_neutral_mass="958.55835" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.40993.40993.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=40993" end_scan="40993" index="25221" precursor_neutral_mass="958.55566" retention_time_sec="1869.8984">
<search_result>
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<search_result>
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<search_result>
<search_hit peptide="ASASGAMAK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="834.39056" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Vesicle-associated membrane protein-associated protein A OS=Homo sapiens OX=9606 GN=VAPA PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="12" protein="sp|Q9P0L0|VAPA_HUMAN" peptide_prev_aa="M" is_rejected="0">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41002" uncalibrated_precursor_neutral_mass="832.3996" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41002.41002.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41002" end_scan="41002" index="25229" precursor_neutral_mass="832.39813" retention_time_sec="1870.3789">
<search_result>
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<spectrum_query start_scan="41009" uncalibrated_precursor_neutral_mass="1061.4946" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41009.41009.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41009" end_scan="41009" index="25236" precursor_neutral_mass="1061.4927" retention_time_sec="1870.637">
<search_result>
<search_hit peptide="ATMQNLNDR" massdiff="3.662109375E-4" calc_neutral_pep_mass="1061.4923" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Keratin, type I cytoskeletal 17 OS=Homo sapiens OX=9606 GN=KRT17 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q04695|K1C17_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Keratin, type I cytoskeletal 23 OS=Homo sapiens OX=9606 GN=KRT23 PE=1 SV=2" protein="sp|Q9C075|K1C23_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
<search_score name="hyperscore" value="17.742"/>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="LIAAQTGTR" massdiff="-3.662109375E-4" calc_neutral_pep_mass="929.5294" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|Q9BZL1|UBL5_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="EAESLIAKK" massdiff="7.9345703125E-4" calc_neutral_pep_mass="987.56" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="T-complex protein 1 subunit beta OS=Homo sapiens OX=9606 GN=CCT2 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P78371|TCPB_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="FQTMEEK" massdiff="-6.103515625E-5" calc_neutral_pep_mass="911.4058" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL3 OS=Homo sapiens OX=9606 GN=RPL3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P39023|RL3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="41022" uncalibrated_precursor_neutral_mass="1069.5594" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41022.41022.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41022" end_scan="41022" index="25249" precursor_neutral_mass="1069.5515" retention_time_sec="1871.1165">
<search_result>
<search_hit peptide="GDQVISPARGA" massdiff="0.0" calc_neutral_pep_mass="1069.5515" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="FERM, ARHGEF and pleckstrin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=FARP2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="rev_sp|O94887|FARP2_HUMAN" peptide_prev_aa="P" is_rejected="0">
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<spectrum_query start_scan="41027" uncalibrated_precursor_neutral_mass="1045.5413" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41027.41027.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41027" end_scan="41027" index="25253" precursor_neutral_mass="1045.5409" retention_time_sec="1871.4482">
<search_result>
<search_hit peptide="GAVQGGLDTTK" massdiff="6.103515625E-4" calc_neutral_pep_mass="1045.5403" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Perilipin-4 OS=Homo sapiens OX=9606 GN=PLIN4 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="9" protein="sp|Q96Q06|PLIN4_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</peptideprophet_result>
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</search_hit>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41924" uncalibrated_precursor_neutral_mass="1193.594" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.41924.41924.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41924" end_scan="41924" index="26072" precursor_neutral_mass="1193.5941" retention_time_sec="1910.1362">
<search_result>
<search_hit peptide="EHIKNPDWR" massdiff="0.0" calc_neutral_pep_mass="1193.5941" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Importin subunit beta-1 OS=Homo sapiens OX=9606 GN=KPNB1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="5" protein="sp|Q14974|IMB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="41927" uncalibrated_precursor_neutral_mass="922.47723" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41927.41927.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41927" end_scan="41927" index="26075" precursor_neutral_mass="922.47375" retention_time_sec="1910.247">
<search_result>
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</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="41929" uncalibrated_precursor_neutral_mass="1006.51404" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41929.41929.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41929" end_scan="41929" index="26077" precursor_neutral_mass="1006.5126" retention_time_sec="1910.3207">
<search_result>
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<spectrum_query start_scan="41933" uncalibrated_precursor_neutral_mass="1128.6528" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.41933.41933.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41933" end_scan="41933" index="26080" precursor_neutral_mass="1128.648" retention_time_sec="1910.6168">
<search_result>
<search_hit peptide="KLLEEDVKR" massdiff="-0.002197265625" calc_neutral_pep_mass="1128.6501" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|P12270|TPR_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="41934" uncalibrated_precursor_neutral_mass="958.39014" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41934.41934.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41934" end_scan="41934" index="26081" precursor_neutral_mass="958.38873" retention_time_sec="1910.6543">
<search_result>
<search_hit peptide="TYCCDLK" massdiff="-6.103515625E-5" calc_neutral_pep_mass="958.3888" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Mitochondrial carrier homolog 2 OS=Homo sapiens OX=9606 GN=MTCH2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q9Y6C9|MTCH2_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="TYCCDLK">
<mod_aminoacid_mass mass="160.03065" position="3"/>
<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41940" uncalibrated_precursor_neutral_mass="906.4906" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41940.41940.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41940" end_scan="41940" index="26087" precursor_neutral_mass="906.4918" retention_time_sec="1910.8757">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41943" uncalibrated_precursor_neutral_mass="1144.6207" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.41943.41943.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41943" end_scan="41943" index="26090" precursor_neutral_mass="1144.6199" retention_time_sec="1910.9865">
<search_result>
<search_hit peptide="DRIESLEKR" massdiff="0.0" calc_neutral_pep_mass="1144.6199" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cell division cycle 5-like protein OS=Homo sapiens OX=9606 GN=CDC5L PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q99459|CDC5L_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="DDFTEER" massdiff="0.00146484375" calc_neutral_pep_mass="910.3668" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Homo sapiens OX=9606 GN=SDHB PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="4" protein="sp|P21912|SDHB_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41949" uncalibrated_precursor_neutral_mass="1027.4626" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41949.41949.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41949" end_scan="41949" index="26096" precursor_neutral_mass="1027.462" retention_time_sec="1911.2079">
<search_result>
<search_hit peptide="NYYQDTPK" massdiff="9.765625E-4" calc_neutral_pep_mass="1027.461" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleolar protein 16 OS=Homo sapiens OX=9606 GN=NOP16 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|Q9Y3C1|NOP16_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="KNLYGLER" massdiff="-9.1552734375E-4" calc_neutral_pep_mass="991.54504" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="TRAF-interacting protein with FHA domain-containing protein A OS=Homo sapiens OX=9606 GN=TIFA PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q96CG3|TIFA_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<spectrum_query start_scan="41957" uncalibrated_precursor_neutral_mass="1115.5615" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41957.41957.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41957" end_scan="41957" index="26103" precursor_neutral_mass="1115.5605" retention_time_sec="1911.6522">
<search_result>
<search_hit peptide="FHDIDDVKK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1115.561" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Inorganic pyrophosphatase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PPA2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|Q9H2U2|IPYR2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="41958" uncalibrated_precursor_neutral_mass="789.4623" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41958.41958.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41958" end_scan="41958" index="26104" precursor_neutral_mass="789.4617" retention_time_sec="1911.6891">
<search_result>
<search_hit peptide="SSVVTAVK" massdiff="0.0020751953125" calc_neutral_pep_mass="789.4596" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens OX=9606 GN=CAND1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|Q86VP6|CAND1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41961" uncalibrated_precursor_neutral_mass="1339.6538" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41961.41961.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41961" end_scan="41961" index="26107" precursor_neutral_mass="1339.6598" retention_time_sec="1911.7998">
<search_result>
<search_hit peptide="MQQSVYVKDDK" massdiff="0.015625" calc_neutral_pep_mass="1339.6442" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Kinectin OS=Homo sapiens OX=9606 GN=KTN1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|Q86UP2|KTN1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41965" uncalibrated_precursor_neutral_mass="1040.491" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41965.41965.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41965" end_scan="41965" index="26111" precursor_neutral_mass="1040.488" retention_time_sec="1911.9475">
<search_result>
<search_hit peptide="QVAQQEAER" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1040.4886" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Prohibitin 1 OS=Homo sapiens OX=9606 GN=PHB1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|P35232|PHB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="41973" uncalibrated_precursor_neutral_mass="1444.7529" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.41973.41973.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41973" end_scan="41973" index="26119" precursor_neutral_mass="1444.7529" retention_time_sec="1912.2427">
<search_result>
<search_hit peptide="KEAQELSQNSAIK" massdiff="8.544921875E-4" calc_neutral_pep_mass="1444.7521" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleolar RNA helicase 2 OS=Homo sapiens OX=9606 GN=DDX21 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="9" protein="sp|Q9NR30|DDX21_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41976" uncalibrated_precursor_neutral_mass="899.54486" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41976.41976.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41976" end_scan="41976" index="26122" precursor_neutral_mass="899.54364" retention_time_sec="1912.3535">
<search_result>
<search_hit peptide="QELAAIKK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="899.544" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|Q99715|COCA1_HUMAN" peptide_prev_aa="E" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41980" uncalibrated_precursor_neutral_mass="910.36914" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41980.41980.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41980" end_scan="41980" index="26125" precursor_neutral_mass="910.3724" retention_time_sec="1912.6508">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41981" uncalibrated_precursor_neutral_mass="855.4936" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41981.41981.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41981" end_scan="41981" index="26126" precursor_neutral_mass="855.49" retention_time_sec="1912.6876">
<search_result>
<search_hit peptide="ALQQQLR" massdiff="-0.00262451171875" calc_neutral_pep_mass="855.4926" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="CUGBP Elav-like family member 2 OS=Homo sapiens OX=9606 GN=CELF2 PE=1 SV=1" num_tot_proteins="3" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|O95319|CELF2_HUMAN" peptide_prev_aa="Q" is_rejected="0">
<alternative_protein protein_descr="Centrosome and spindle pole-associated protein 1 OS=Homo sapiens OX=9606 GN=CSPP1 PE=1 SV=4" protein="sp|Q1MSJ5|CSPP1_HUMAN" peptide_prev_aa="E" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=DUS3L PE=1 SV=2" protein="sp|Q96G46|DUS3L_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
<search_score name="hyperscore" value="10.177"/>
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<search_score name="expect" value="1.575310e+00"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41982" uncalibrated_precursor_neutral_mass="922.47186" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41982.41982.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41982" end_scan="41982" index="26127" precursor_neutral_mass="922.47375" retention_time_sec="1912.7245">
<search_result>
<search_hit peptide="KEIGFSDK" massdiff="-0.002197265625" calc_neutral_pep_mass="922.47595" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Homo sapiens OX=9606 GN=CPS1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|P31327|CPSM_HUMAN" peptide_prev_aa="A" is_rejected="0">
<search_score name="hyperscore" value="12.652"/>
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<search_score name="expect" value="2.599149e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.637191" all_ntt_prob="(0.637191,0.637191,0.637191)">
<search_score_summary>
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41985" uncalibrated_precursor_neutral_mass="1249.5592" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41985.41985.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41985" end_scan="41985" index="26130" precursor_neutral_mass="1249.5597" retention_time_sec="1912.8351">
<search_result>
<search_hit peptide="TYGEPESAGPSR" massdiff="0.0023193359375" calc_neutral_pep_mass="1249.5574" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Emerin OS=Homo sapiens OX=9606 GN=EMD PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="12" protein="sp|P50402|EMD_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="23.58"/>
<search_score name="nextscore" value="11.925"/>
<search_score name="expect" value="1.045466e-04"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999990" all_ntt_prob="(0.999990,0.999990,0.999990)">
<search_score_summary>
<parameter name="fval" value="2.219220"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="1.856126"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41988" uncalibrated_precursor_neutral_mass="1200.6279" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41988.41988.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41988" end_scan="41988" index="26133" precursor_neutral_mass="1200.6276" retention_time_sec="1912.9458">
<search_result>
<search_hit peptide="EGVVGPELHHK" massdiff="0.0025634765625" calc_neutral_pep_mass="1200.625" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Plectin OS=Homo sapiens OX=9606 GN=PLEC PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|Q15149|PLEC_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="17.043"/>
<search_score name="nextscore" value="13.22"/>
<search_score name="expect" value="7.243837e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.975464" all_ntt_prob="(0.975464,0.975464,0.975464)">
<search_score_summary>
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="41989" uncalibrated_precursor_neutral_mass="789.4613" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.41989.41989.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41989" end_scan="41989" index="26134" precursor_neutral_mass="789.4604" retention_time_sec="1912.9825">
<search_result>
<search_hit peptide="SSVVTAVK" massdiff="7.9345703125E-4" calc_neutral_pep_mass="789.4596" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens OX=9606 GN=CAND1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="10" protein="sp|Q86VP6|CAND1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="18.607"/>
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<search_score name="expect" value="1.168458e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.992937" all_ntt_prob="(0.992937,0.992937,0.992937)">
<search_score_summary>
<parameter name="fval" value="0.728950"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="1.005064"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="41990" uncalibrated_precursor_neutral_mass="1444.7544" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41990.41990.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41990" end_scan="41990" index="26135" precursor_neutral_mass="1444.7529" retention_time_sec="1913.0195">
<search_result>
<search_hit peptide="KEAQELSQNSAIK" massdiff="8.544921875E-4" calc_neutral_pep_mass="1444.7521" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleolar RNA helicase 2 OS=Homo sapiens OX=9606 GN=DDX21 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="16" protein="sp|Q9NR30|DDX21_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="32.208"/>
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<search_score name="expect" value="1.892202e-06"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999998" all_ntt_prob="(0.999998,0.999998,0.999998)">
<search_score_summary>
<parameter name="fval" value="2.608120"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="41991" uncalibrated_precursor_neutral_mass="672.4178" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.41991.41991.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41991" end_scan="41991" index="26136" precursor_neutral_mass="672.41797" retention_time_sec="1913.0564">
<search_result>
<search_hit peptide="AAAVTLK" massdiff="9.765625E-4" calc_neutral_pep_mass="672.417" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pyruvate dehydrogenase protein X component, mitochondrial OS=Homo sapiens OX=9606 GN=PDHX PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|O00330|ODPX_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="17.638"/>
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<search_score name="expect" value="2.941282e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.664838" all_ntt_prob="(0.664838,0.664838,0.664838)">
<search_score_summary>
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="41992" uncalibrated_precursor_neutral_mass="1187.6418" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.41992.41992.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41992" end_scan="41992" index="26137" precursor_neutral_mass="1187.641" retention_time_sec="1913.0934">
<search_result>
<search_hit peptide="GAFGKPQGTVAR" massdiff="0.0" calc_neutral_pep_mass="1187.641" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL16 OS=Homo sapiens OX=9606 GN=RPL10 PE=1 SV=5" num_tot_proteins="2" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|P27635|RL10_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Ribosomal protein uL16-like OS=Homo sapiens OX=9606 GN=RPL10L PE=1 SV=3" protein="sp|Q96L21|RL10L_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
<search_score name="hyperscore" value="17.125"/>
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<search_score name="expect" value="8.691471e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.998288" all_ntt_prob="(0.998288,0.998288,0.998288)">
<search_score_summary>
<parameter name="fval" value="1.048180"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.000000"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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</spectrum_query>
<spectrum_query start_scan="41994" uncalibrated_precursor_neutral_mass="1234.6935" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.41994.41994.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41994" end_scan="41994" index="26139" precursor_neutral_mass="1234.6917" retention_time_sec="1913.1672">
<search_result>
<search_hit peptide="KIQGIEEYKK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1234.692" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens OX=9606 GN=DYNC1LI1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|Q9Y6G9|DC1L1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="41995" uncalibrated_precursor_neutral_mass="958.39" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.41995.41995.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41995" end_scan="41995" index="26140" precursor_neutral_mass="958.38995" retention_time_sec="1913.2041">
<search_result>
<search_hit peptide="TYCCDLK" massdiff="0.00115966796875" calc_neutral_pep_mass="958.3888" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Mitochondrial carrier homolog 2 OS=Homo sapiens OX=9606 GN=MTCH2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|Q9Y6C9|MTCH2_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="TYCCDLK">
<mod_aminoacid_mass mass="160.03065" position="3"/>
<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
<search_score name="hyperscore" value="17.685"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="41998" uncalibrated_precursor_neutral_mass="1123.5588" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.41998.41998.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=41998" end_scan="41998" index="26143" precursor_neutral_mass="1123.5594" retention_time_sec="1913.3148">
<search_result>
<search_hit peptide="LEHCPQALR" massdiff="0.9991455078125" calc_neutral_pep_mass="1122.5603" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="BRCA1-associated ATM activator 1 OS=Homo sapiens OX=9606 GN=BRAT1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|Q6PJG6|BRAT1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="LEHCPQALR">
<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
<search_score name="hyperscore" value="12.967"/>
<search_score name="nextscore" value="11.934"/>
<search_score name="expect" value="1.809112e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.713156" all_ntt_prob="(0.713156,0.713156,0.713156)">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
<spectrum_query start_scan="42001" uncalibrated_precursor_neutral_mass="1055.4678" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42001.42001.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42001" end_scan="42001" index="26146" precursor_neutral_mass="1055.4661" retention_time_sec="1913.4254">
<search_result>
<search_hit peptide="YSEGYPGQR" massdiff="-0.0010986328125" calc_neutral_pep_mass="1055.4672" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens OX=9606 GN=SHMT1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|P34896|GLYC_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="13.64"/>
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<search_score name="expect" value="5.455695e-02"/>
<analysis_result analysis="peptideprophet">
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<search_result>
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<spectrum_query start_scan="42005" uncalibrated_precursor_neutral_mass="922.56085" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42005.42005.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42005" end_scan="42005" index="26149" precursor_neutral_mass="922.5597" retention_time_sec="1913.7208">
<search_result>
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<alternative_protein protein_descr="Actin, alpha cardiac muscle 1 OS=Homo sapiens OX=9606 GN=ACTC1 PE=1 SV=1" protein="sp|P68032|ACTC_HUMAN" peptide_prev_aa="K" peptide_next_aa="Y" num_tol_term="0"/>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="IQEQFQK" massdiff="-0.00146484375" calc_neutral_pep_mass="919.4763" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="NudC domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NUDCD3 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q8IVD9|NUDC3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="ASGTTTTAVK" massdiff="6.103515625E-4" calc_neutral_pep_mass="977.503" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="S-methyl-5&apos;-thioadenosine phosphorylase OS=Homo sapiens OX=9606 GN=MTAP PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="10" protein="sp|Q13126|MTAP_HUMAN" peptide_prev_aa="M" is_rejected="0">
<modification_info modified_peptide="n[43]ASGTTTTAVK" mod_nterm_mass="43.018425">
</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="QQKPTLSGQR" massdiff="0.00146484375" calc_neutral_pep_mass="1124.5938" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="eIF5-mimic protein 2 OS=Homo sapiens OX=9606 GN=BZW1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="8" protein="sp|Q7L1Q6|5MP2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<mod_aminoacid_mass mass="111.032074" position="1"/>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="NLDSEKEKELER" massdiff="4.8828125E-4" calc_neutral_pep_mass="1488.742" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transcription elongation regulator 1 OS=Homo sapiens OX=9606 GN=TCERG1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|O14776|TCRG1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_hit peptide="AFREEAIK" massdiff="-6.103515625E-5" calc_neutral_pep_mass="962.5185" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="X-ray repair cross-complementing protein 5 OS=Homo sapiens OX=9606 GN=XRCC5 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|P13010|XRCC5_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="ADKNEVAAEVAK" massdiff="1.220703125E-4" calc_neutral_pep_mass="1243.6407" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Methionine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=MARS1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|P56192|SYMC_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="42080" uncalibrated_precursor_neutral_mass="1200.6273" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42080.42080.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42080" end_scan="42080" index="26221" precursor_neutral_mass="1200.6277" retention_time_sec="1916.9238">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="42082" uncalibrated_precursor_neutral_mass="1284.6924" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42082.42082.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42082" end_scan="42082" index="26223" precursor_neutral_mass="1284.6895" retention_time_sec="1916.9978">
<search_result>
<search_hit peptide="RREEEGIQLR" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1284.6897" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Importin subunit alpha-6 OS=Homo sapiens OX=9606 GN=KPNA5 PE=1 SV=3" num_tot_proteins="3" tot_num_ions="18" hit_rank="1" num_matched_ions="6" protein="sp|O15131|IMA6_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<alternative_protein protein_descr="Importin subunit alpha-5 OS=Homo sapiens OX=9606 GN=KPNA1 PE=1 SV=3" protein="sp|P52294|IMA5_HUMAN" peptide_prev_aa="R" peptide_next_aa="K" num_tol_term="0"/>
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</search_score_summary>
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<spectrum_query start_scan="42084" uncalibrated_precursor_neutral_mass="899.54486" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42084.42084.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42084" end_scan="42084" index="26225" precursor_neutral_mass="899.54315" retention_time_sec="1917.0715">
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<spectrum_query start_scan="42087" uncalibrated_precursor_neutral_mass="753.47644" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42087.42087.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42087" end_scan="42087" index="26228" precursor_neutral_mass="753.47473" retention_time_sec="1917.1819">
<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="42088" uncalibrated_precursor_neutral_mass="881.5344" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42088.42088.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42088" end_scan="42088" index="26229" precursor_neutral_mass="881.53375" retention_time_sec="1917.2189">
<search_result>
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<modification_info modified_peptide="E[111]QLAALKK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="42089" uncalibrated_precursor_neutral_mass="743.4197" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42089.42089.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42089" end_scan="42089" index="26230" precursor_neutral_mass="743.41693" retention_time_sec="1917.2557">
<search_result>
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<search_score name="hyperscore" value="20.955"/>
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</search_score_summary>
</peptideprophet_result>
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<search_result>
<search_hit peptide="CPPGVVPACHNSK" massdiff="0.0013427734375" calc_neutral_pep_mass="1421.6543" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Fatty acid synthase OS=Homo sapiens OX=9606 GN=FASN PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="4" protein="sp|P49327|FAS_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="CPPGVVPACHNSK">
<mod_aminoacid_mass mass="160.03065" position="1"/>
<mod_aminoacid_mass mass="160.03065" position="9"/>
</modification_info>
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<search_score name="expect" value="3.498183e+00"/>
<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="GICECGVCK" massdiff="-0.0013427734375" calc_neutral_pep_mass="1081.4354" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Integrin beta-1 OS=Homo sapiens OX=9606 GN=ITGB1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P05556|ITB1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="GICECGVCK">
<mod_aminoacid_mass mass="160.03065" position="3"/>
<mod_aminoacid_mass mass="160.03065" position="5"/>
<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
<search_score name="hyperscore" value="17.289"/>
<search_score name="nextscore" value="8.679"/>
<search_score name="expect" value="9.661514e-03"/>
<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="42102" uncalibrated_precursor_neutral_mass="789.4365" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42102.42102.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42102" end_scan="42102" index="26242" precursor_neutral_mass="789.4386" retention_time_sec="1917.8804">
<search_result>
<search_hit peptide="VYGPGVAK" massdiff="1.220703125E-4" calc_neutral_pep_mass="789.4385" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Filamin-A OS=Homo sapiens OX=9606 GN=FLNA PE=1 SV=4" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P21333|FLNA_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="15.551"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="42103" uncalibrated_precursor_neutral_mass="753.4137" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42103.42103.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42103" end_scan="42103" index="26243" precursor_neutral_mass="753.4135" retention_time_sec="1917.9172">
<search_result>
<search_hit peptide="APVPSQR" massdiff="1.8310546875E-4" calc_neutral_pep_mass="753.4133" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transmembrane protein 108 OS=Homo sapiens OX=9606 GN=TMEM108 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q6UXF1|TM108_HUMAN" peptide_prev_aa="A" is_rejected="0">
<search_score name="hyperscore" value="11.775"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="42106" uncalibrated_precursor_neutral_mass="1010.4562" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42106.42106.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42106" end_scan="42106" index="26246" precursor_neutral_mass="1010.4555" retention_time_sec="1918.0281">
<search_result>
<search_hit peptide="DTYIENEK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1010.4556" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens OX=9606 GN=RPN1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="13" protein="sp|P04843|RPN1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="42109" uncalibrated_precursor_neutral_mass="1086.5336" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42109.42109.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42109" end_scan="42109" index="26249" precursor_neutral_mass="1086.5348" retention_time_sec="1918.1388">
<search_result>
<search_hit peptide="NSATIQSAQGK" massdiff="0.0042724609375" calc_neutral_pep_mass="1086.5305" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q9BRX5|PSF3_HUMAN" peptide_prev_aa="L" is_rejected="0">
<modification_info modified_peptide="N[97]SATIQSAQGK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="42111" uncalibrated_precursor_neutral_mass="880.48895" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42111.42111.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42111" end_scan="42111" index="26250" precursor_neutral_mass="880.4882" retention_time_sec="1918.2128">
<search_result>
<search_hit peptide="SVVGNLHR" massdiff="3.662109375E-4" calc_neutral_pep_mass="880.48785" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NOP2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|P46087|NOP2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="42112" uncalibrated_precursor_neutral_mass="995.6007" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42112.42112.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42112" end_scan="42112" index="26251" precursor_neutral_mass="995.6011" retention_time_sec="1918.2494">
<search_result>
<search_hit peptide="KVEPVPVTK" massdiff="-4.2724609375E-4" calc_neutral_pep_mass="995.6015" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Kinectin OS=Homo sapiens OX=9606 GN=KTN1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|Q86UP2|KTN1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="42113" uncalibrated_precursor_neutral_mass="1302.6556" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42113.42113.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42113" end_scan="42113" index="26252" precursor_neutral_mass="1302.6573" retention_time_sec="1918.2863">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="42192" uncalibrated_precursor_neutral_mass="1651.7683" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.42192.42192.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42192" end_scan="42192" index="26328" precursor_neutral_mass="1651.7697" retention_time_sec="1921.6239">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="42193" uncalibrated_precursor_neutral_mass="883.4588" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42193.42193.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42193" end_scan="42193" index="26329" precursor_neutral_mass="883.45764" retention_time_sec="1921.6608">
<search_result>
<search_hit peptide="IHDVLCK" massdiff="-9.1552734375E-4" calc_neutral_pep_mass="883.45856" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Leucine-rich PPR motif-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=LRPPRC PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|P42704|LPPRC_HUMAN" peptide_prev_aa="R" is_rejected="0">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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</peptideprophet_result>
</analysis_result>
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<search_result>
<search_hit peptide="HVQGILR" massdiff="-7.9345703125E-4" calc_neutral_pep_mass="821.4871" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative small nuclear ribonucleoprotein G-like protein 15 OS=Homo sapiens OX=9606 GN=SNRPGP15 PE=5 SV=2" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|A8MWD9|RUXGL_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Small nuclear ribonucleoprotein G OS=Homo sapiens OX=9606 GN=SNRPG PE=1 SV=1" protein="sp|P62308|RUXG_HUMAN" peptide_prev_aa="R" peptide_next_aa="G" num_tol_term="0"/>
<search_score name="hyperscore" value="17.624"/>
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<search_score name="expect" value="2.483850e-01"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="42200" uncalibrated_precursor_neutral_mass="686.4342" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42200.42200.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42200" end_scan="42200" index="26335" precursor_neutral_mass="686.4318" retention_time_sec="1922.0652">
<search_result>
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<search_score name="hyperscore" value="17.903"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
<search_hit peptide="MLHVDPHQR" massdiff="-0.00146484375" calc_neutral_pep_mass="1131.5607" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens OX=9606 GN=RPS6KA3 PE=1 SV=1" num_tot_proteins="3" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|P51812|KS6A3_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Ribosomal protein S6 kinase alpha-2 OS=Homo sapiens OX=9606 GN=RPS6KA2 PE=1 SV=2" protein="sp|Q15349|KS6A2_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens OX=9606 GN=RPS6KA1 PE=1 SV=2" protein="sp|Q15418|KS6A1_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
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<search_score name="expect" value="2.845968e+00"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="42210" uncalibrated_precursor_neutral_mass="1300.5984" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42210.42210.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42210" end_scan="42210" index="26344" precursor_neutral_mass="1300.5962" retention_time_sec="1922.434">
<search_result>
<search_hit peptide="HTNYTMEHIR" massdiff="-0.001953125" calc_neutral_pep_mass="1300.5981" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Alpha-actinin-4 OS=Homo sapiens OX=9606 GN=ACTN4 PE=1 SV=2" num_tot_proteins="3" tot_num_ions="18" hit_rank="1" num_matched_ions="10" protein="sp|O43707|ACTN4_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Alpha-actinin-1 OS=Homo sapiens OX=9606 GN=ACTN1 PE=1 SV=2" protein="sp|P12814|ACTN1_HUMAN" peptide_prev_aa="K" peptide_next_aa="V" num_tol_term="0"/>
<alternative_protein protein_descr="Alpha-actinin-2 OS=Homo sapiens OX=9606 GN=ACTN2 PE=1 SV=1" protein="sp|P35609|ACTN2_HUMAN" peptide_prev_aa="K" peptide_next_aa="V" num_tol_term="0"/>
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<spectrum_query start_scan="42211" uncalibrated_precursor_neutral_mass="990.4989" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42211.42211.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42211" end_scan="42211" index="26345" precursor_neutral_mass="990.4989" retention_time_sec="1922.4708">
<search_result>
<search_hit peptide="LNLESSNSK" massdiff="7.32421875E-4" calc_neutral_pep_mass="990.49817" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cell division cycle protein 27 homolog OS=Homo sapiens OX=9606 GN=CDC27 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|P30260|CDC27_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="42212" uncalibrated_precursor_neutral_mass="1042.4412" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42212.42212.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42212" end_scan="42212" index="26346" precursor_neutral_mass="1042.4396" retention_time_sec="1922.5076">
<search_result>
<search_hit peptide="HCNGVDWR" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1042.4402" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Eukaryotic translation initiation factor 3 subunit D OS=Homo sapiens OX=9606 GN=EIF3D PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|O15371|EIF3D_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="HCNGVDWR">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="42214" uncalibrated_precursor_neutral_mass="1081.436" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42214.42214.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42214" end_scan="42214" index="26348" precursor_neutral_mass="1081.434" retention_time_sec="1922.5815">
<search_result>
<search_hit peptide="GICECGVCK" massdiff="-0.00146484375" calc_neutral_pep_mass="1081.4354" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Integrin beta-1 OS=Homo sapiens OX=9606 GN=ITGB1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P05556|ITB1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="GICECGVCK">
<mod_aminoacid_mass mass="160.03065" position="3"/>
<mod_aminoacid_mass mass="160.03065" position="5"/>
<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
<search_score name="hyperscore" value="15.958"/>
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
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</search_score_summary>
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<spectrum_query start_scan="42215" uncalibrated_precursor_neutral_mass="886.43854" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42215.42215.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42215" end_scan="42215" index="26349" precursor_neutral_mass="886.4386" retention_time_sec="1922.6184">
<search_result>
<search_hit peptide="ADVDVSGPK" massdiff="-9.765625E-4" calc_neutral_pep_mass="886.4396" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens OX=9606 GN=AHNAK PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="11" protein="sp|Q09666|AHNK_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="AEPSAPESK" massdiff="-0.0015869140625" calc_neutral_pep_mass="956.4451" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens OX=9606 GN=STT3B PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q8TCJ2|STT3B_HUMAN" peptide_prev_aa="M" is_rejected="0">
<modification_info modified_peptide="n[43]AEPSAPESK" mod_nterm_mass="43.018425">
</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="42217" uncalibrated_precursor_neutral_mass="969.4346" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42217.42217.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42217" end_scan="42217" index="26351" precursor_neutral_mass="969.43555" retention_time_sec="1922.6924">
<search_result>
<search_hit peptide="YFQCQPK" massdiff="-0.00225830078125" calc_neutral_pep_mass="969.4378" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="CAP-Gly domain-containing linker protein 1 OS=Homo sapiens OX=9606 GN=CLIP1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P30622|CLIP1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="YFQCQPK">
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</modification_info>
<search_score name="hyperscore" value="11.031"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="TGVVTDGVK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="874.476" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Electron transfer flavoprotein subunit beta OS=Homo sapiens OX=9606 GN=ETFB PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="11" protein="sp|P38117|ETFB_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="22.236"/>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
<search_hit peptide="RVHPVSTMIK" massdiff="-0.00146484375" calc_neutral_pep_mass="1166.6593" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="L-lactate dehydrogenase A chain OS=Homo sapiens OX=9606 GN=LDHA PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="7" protein="sp|P00338|LDHA_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="CGVISPR">
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<spectrum_query start_scan="42270" uncalibrated_precursor_neutral_mass="986.5026" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42270.42270.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42270" end_scan="42270" index="26401" precursor_neutral_mass="986.5018" retention_time_sec="1925.084">
<search_result>
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<spectrum_query start_scan="42271" uncalibrated_precursor_neutral_mass="816.4315" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42271.42271.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42271" end_scan="42271" index="26402" precursor_neutral_mass="816.43243" retention_time_sec="1925.121">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="42272" uncalibrated_precursor_neutral_mass="960.4772" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42272.42272.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42272" end_scan="42272" index="26403" precursor_neutral_mass="960.4772" retention_time_sec="1925.1578">
<search_result>
<search_hit peptide="LEEETVNK" massdiff="7.9345703125E-4" calc_neutral_pep_mass="960.4764" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cell death regulator Aven OS=Homo sapiens OX=9606 GN=AVEN PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q9NQS1|AVEN_HUMAN" peptide_prev_aa="E" is_rejected="0">
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<spectrum_query start_scan="42276" uncalibrated_precursor_neutral_mass="1083.4718" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42276.42276.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42276" end_scan="42276" index="26407" precursor_neutral_mass="1083.4681" retention_time_sec="1925.305">
<search_result>
<search_hit peptide="YLATCADDR" massdiff="0.002685546875" calc_neutral_pep_mass="1083.4655" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transducin beta-like protein 2 OS=Homo sapiens OX=9606 GN=TBL2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|Q9Y4P3|TBL2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="42305" uncalibrated_precursor_neutral_mass="1113.506" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42305.42305.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42305" end_scan="42305" index="26435" precursor_neutral_mass="1113.5067" retention_time_sec="1926.5209">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="42306" uncalibrated_precursor_neutral_mass="1168.5818" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42306.42306.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42306" end_scan="42306" index="26436" precursor_neutral_mass="1168.5826" retention_time_sec="1926.5577">
<search_result>
<search_hit peptide="AAHGGSAASSALK" massdiff="-9.765625E-4" calc_neutral_pep_mass="1168.5836" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="UBX domain-containing protein 7 OS=Homo sapiens OX=9606 GN=UBXN7 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="12" protein="sp|O94888|UBXN7_HUMAN" peptide_prev_aa="M" is_rejected="0">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="TSAVPSPCGK" massdiff="-0.002197265625" calc_neutral_pep_mass="1002.4804" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ACADVL PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|P49748|ACADV_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="TSAVPSPCGK">
<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Myosin-10 OS=Homo sapiens OX=9606 GN=MYH10 PE=1 SV=3" protein="sp|P35580|MYH10_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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<modification_info modified_peptide="NCAAYLK">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="42733" uncalibrated_precursor_neutral_mass="1298.7357" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42733.42733.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42733" end_scan="42733" index="26841" precursor_neutral_mass="1298.7356" retention_time_sec="1945.082">
<search_result>
<search_hit peptide="KPAPPPAPPQATK" massdiff="0.0010986328125" calc_neutral_pep_mass="1298.7345" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens OX=9606 GN=ZC3H18 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="7" protein="sp|Q86VM9|ZCH18_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="42735" uncalibrated_precursor_neutral_mass="1319.5836" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42735.42735.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42735" end_scan="42735" index="26843" precursor_neutral_mass="1319.5847" retention_time_sec="1945.1558">
<search_result>
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<modification_info modified_peptide="YTQSNSVCYAK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="42736" uncalibrated_precursor_neutral_mass="959.4691" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42736.42736.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42736" end_scan="42736" index="26844" precursor_neutral_mass="959.47046" retention_time_sec="1945.1926">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="42738" uncalibrated_precursor_neutral_mass="1527.7546" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42738.42738.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42738" end_scan="42738" index="26846" precursor_neutral_mass="1527.7544" retention_time_sec="1945.2665">
<search_result>
<search_hit peptide="AAPAAEEKEEAREK" massdiff="0.0015869140625" calc_neutral_pep_mass="1527.7528" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large neutral amino acids transporter small subunit 1 OS=Homo sapiens OX=9606 GN=SLC7A5 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="7" protein="sp|Q01650|LAT1_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="42739" uncalibrated_precursor_neutral_mass="730.4177" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.42739.42739.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42739" end_scan="42739" index="26847" precursor_neutral_mass="730.42303" retention_time_sec="1945.3033">
<search_result>
<search_hit peptide="TEVALAK" massdiff="5.4931640625E-4" calc_neutral_pep_mass="730.4225" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Microtubule-associated protein 4 OS=Homo sapiens OX=9606 GN=MAP4 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|P27816|MAP4_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="42743" uncalibrated_precursor_neutral_mass="950.51074" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.42743.42743.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42743" end_scan="42743" index="26850" precursor_neutral_mass="950.5083" retention_time_sec="1945.5997">
<search_result>
<search_hit peptide="KALESFEK" massdiff="0.00103759765625" calc_neutral_pep_mass="950.50726" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="43 kDa receptor-associated protein of the synapse OS=Homo sapiens OX=9606 GN=RAPSN PE=1 SV=4" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|Q13702|RAPSN_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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</peptideprophet_result>
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<spectrum_query start_scan="42749" uncalibrated_precursor_neutral_mass="2150.9985" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42749.42749.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42749" end_scan="42749" index="26856" precursor_neutral_mass="2150.9946" retention_time_sec="1945.8208">
<search_result>
<search_hit peptide="SNNSETSSVAQSGSESKVEPK" massdiff="0.001953125" calc_neutral_pep_mass="2150.9927" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="RanBP2-like and GRIP domain-containing protein 3 OS=Homo sapiens OX=9606 GN=RGPD3 PE=3 SV=2" num_tot_proteins="5" tot_num_ions="40" hit_rank="1" num_matched_ions="10" protein="sp|A6NKT7|RGPD3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<alternative_protein protein_descr="E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2" protein="sp|P49792|RBP2_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
<alternative_protein protein_descr="RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens OX=9606 GN=RGPD4 PE=2 SV=3" protein="sp|Q7Z3J3|RGPD4_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
<alternative_protein protein_descr="RANBP2-like and GRIP domain-containing protein 5/6 OS=Homo sapiens OX=9606 GN=RGPD5 PE=1 SV=3" protein="sp|Q99666|RGPD5_HUMAN" peptide_prev_aa="K" peptide_next_aa="K" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="HPSKPDPSGECNPDLR" massdiff="0.0028076171875" calc_neutral_pep_mass="1804.8162" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="8" protein="sp|Q09028|RBBP4_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="HPSKPDPSGECNPDLR">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="HVYEIAR" massdiff="0.00250244140625" calc_neutral_pep_mass="886.46606" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL11m OS=Homo sapiens OX=9606 GN=MRPL11 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q9Y3B7|RM11_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="42754" uncalibrated_precursor_neutral_mass="1291.7502" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42754.42754.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42754" end_scan="42754" index="26861" precursor_neutral_mass="1291.7494" retention_time_sec="1946.0054">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="42760" uncalibrated_precursor_neutral_mass="1449.7589" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.42760.42760.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=42760" end_scan="42760" index="26867" precursor_neutral_mass="1449.7625" retention_time_sec="1946.2269">
<search_result>
<search_hit peptide="KFSVSSCRARPR" massdiff="2.44140625E-4" calc_neutral_pep_mass="1449.7622" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="CRACD-like protein OS=Homo sapiens OX=9606 GN=CRACDL PE=1 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="4" protein="sp|Q6NV74|CRCDL_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="HPSKPDPSGECNPDLR" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1804.8162" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="7" protein="sp|Q09028|RBBP4_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="HPSKPDPSGECNPDLR">
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<search_score name="expect" value="4.947011e-02"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Tubulin alpha-1C chain OS=Homo sapiens OX=9606 GN=TUBA1C PE=1 SV=1" protein="sp|Q9BQE3|TBA1C_HUMAN" peptide_prev_aa="R" peptide_next_aa="S" num_tol_term="0"/>
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<search_result>
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<alternative_protein protein_descr="Tubulin alpha-1B chain OS=Homo sapiens OX=9606 GN=TUBA1B PE=1 SV=1" protein="sp|P68363|TBA1B_HUMAN" peptide_prev_aa="L" peptide_next_aa="S" num_tol_term="0"/>
<alternative_protein protein_descr="Tubulin alpha-4A chain OS=Homo sapiens OX=9606 GN=TUBA4A PE=1 SV=1" protein="sp|P68366|TBA4A_HUMAN" peptide_prev_aa="L" peptide_next_aa="S" num_tol_term="0"/>
<alternative_protein protein_descr="Tubulin alpha-1A chain OS=Homo sapiens OX=9606 GN=TUBA1A PE=1 SV=1" protein="sp|Q71U36|TBA1A_HUMAN" peptide_prev_aa="L" peptide_next_aa="S" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<spectrum_query start_scan="43798" uncalibrated_precursor_neutral_mass="999.55035" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.43798.43798.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=43798" end_scan="43798" index="27832" precursor_neutral_mass="999.55005" retention_time_sec="1991.1033">
<search_result>
<search_hit peptide="YALIQHQK" massdiff="-6.103515625E-5" calc_neutral_pep_mass="999.5501" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transcriptional repressor CTCF OS=Homo sapiens OX=9606 GN=CTCF PE=1 SV=1" num_tot_proteins="2" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P49711|CTCF_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="43799" uncalibrated_precursor_neutral_mass="771.42896" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.43799.43799.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=43799" end_scan="43799" index="27833" precursor_neutral_mass="771.4298" retention_time_sec="1991.1401">
<search_result>
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<spectrum_query start_scan="43801" uncalibrated_precursor_neutral_mass="1048.4597" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.43801.43801.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=43801" end_scan="43801" index="27835" precursor_neutral_mass="1048.4626" retention_time_sec="1991.2141">
<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="AALSAQVK" massdiff="4.8828125E-4" calc_neutral_pep_mass="786.4599" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transcription factor BTF3 OS=Homo sapiens OX=9606 GN=BTF3 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="5" protein="rev_sp|P20290|BTF3_HUMAN" peptide_prev_aa="N" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="AVVVCPK" massdiff="-0.00146484375" calc_neutral_pep_mass="771.4313" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens OX=9606 GN=HNRNPU PE=1 SV=6" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="10" protein="sp|Q00839|HNRPU_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="43865" uncalibrated_precursor_neutral_mass="890.48376" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.43865.43865.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=43865" end_scan="43865" index="27895" precursor_neutral_mass="890.48224" retention_time_sec="1994.0151">
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<search_result>
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<search_result>
<search_hit peptide="HDQVLLK" massdiff="-4.2724609375E-4" calc_neutral_pep_mass="851.4865" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger and BTB domain-containing protein 22 OS=Homo sapiens OX=9606 GN=ZBTB22 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|O15209|ZBT22_HUMAN" peptide_prev_aa="F" is_rejected="0">
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<spectrum_query start_scan="43875" uncalibrated_precursor_neutral_mass="1122.567" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.43875.43875.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=43875" end_scan="43875" index="27905" precursor_neutral_mass="1122.5684" retention_time_sec="1994.3838">
<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="RANBP2-like and GRIP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RGPD1 PE=2 SV=1" protein="sp|P0DJD0|RGPD1_HUMAN" peptide_prev_aa="K" peptide_next_aa="Q" num_tol_term="0"/>
<alternative_protein protein_descr="RANBP2-like and GRIP domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RGPD2 PE=2 SV=1" protein="sp|P0DJD1|RGPD2_HUMAN" peptide_prev_aa="K" peptide_next_aa="Q" num_tol_term="0"/>
<alternative_protein protein_descr="E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2" protein="sp|P49792|RBP2_HUMAN" peptide_prev_aa="K" peptide_next_aa="Q" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="YAAEFHAR" massdiff="-9.765625E-4" calc_neutral_pep_mass="963.45624" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Target of EGR1 protein 1 OS=Homo sapiens OX=9606 GN=TOE1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|Q96GM8|TOE1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="DNMALQR" massdiff="0.0018310546875" calc_neutral_pep_mass="846.4018" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Stress-70 protein, mitochondrial OS=Homo sapiens OX=9606 GN=HSPA9 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="5" protein="sp|P38646|GRP75_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
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<search_result>
<search_hit peptide="SASFELATLEGSK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1338.6666" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Rho guanine nucleotide exchange factor 5 OS=Homo sapiens OX=9606 GN=ARHGEF5 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q12774|ARHG5_HUMAN" peptide_prev_aa="P" is_rejected="0">
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<search_result>
<search_hit peptide="TNLCAIHAK" massdiff="-0.0015869140625" calc_neutral_pep_mass="1026.5281" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H3.1 OS=Homo sapiens OX=9606 GN=H3C1 PE=1 SV=2" num_tot_proteins="5" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|P68431|H31_HUMAN" peptide_prev_aa="D" is_rejected="0">
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<alternative_protein protein_descr="Histone H3-7 OS=Homo sapiens OX=9606 GN=H3-7 PE=1 SV=1" protein="sp|Q5TEC6|H37_HUMAN" peptide_prev_aa="D" peptide_next_aa="R" num_tol_term="0"/>
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<modification_info modified_peptide="TNLCAIHAK">
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<search_result>
<search_hit peptide="RLPPQQIEK" massdiff="9.765625E-4" calc_neutral_pep_mass="1107.6399" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="F-actin-capping protein subunit beta OS=Homo sapiens OX=9606 GN=CAPZB PE=1 SV=5" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|P47756|CAPZB_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="KDNQFLAR" massdiff="-6.103515625E-5" calc_neutral_pep_mass="990.52466" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleolar protein 14 OS=Homo sapiens OX=9606 GN=NOP14 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|P78316|NOP14_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="44522" uncalibrated_precursor_neutral_mass="1383.6221" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.44522.44522.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=44522" end_scan="44522" index="28503" precursor_neutral_mass="1383.6201" retention_time_sec="2022.3628">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="45875" uncalibrated_precursor_neutral_mass="1056.5654" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.45875.45875.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=45875" end_scan="45875" index="29775" precursor_neutral_mass="1056.5676" retention_time_sec="2080.9326">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="YLAEVASGEKK" massdiff="0.0025634765625" calc_neutral_pep_mass="1193.6292" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="14-3-3 protein eta OS=Homo sapiens OX=9606 GN=YWHAH PE=1 SV=4" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|Q04917|1433F_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_hit peptide="STLEPVEK" massdiff="-3.0517578125E-4" calc_neutral_pep_mass="901.47565" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock 70 kDa protein 1A OS=Homo sapiens OX=9606 GN=HSPA1A PE=1 SV=1" num_tot_proteins="4" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|P0DMV8|HS71A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="SVGVVTTTR" massdiff="-1.220703125E-4" calc_neutral_pep_mass="918.5134" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Alkaline phosphatase, placental type OS=Homo sapiens OX=9606 GN=ALPP PE=1 SV=2" num_tot_proteins="3" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|P05187|PPB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="45918" uncalibrated_precursor_neutral_mass="1152.5815" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.45918.45918.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=45918" end_scan="45918" index="29814" precursor_neutral_mass="1152.5809" retention_time_sec="2082.812">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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</search_score_summary>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</search_score_summary>
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</analysis_result>
</search_hit>
</search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="47586" uncalibrated_precursor_neutral_mass="1138.6028" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47586.47586.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47586" end_scan="47586" index="31383" precursor_neutral_mass="1138.6019" retention_time_sec="2154.6155">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="47713" uncalibrated_precursor_neutral_mass="911.52484" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47713.47713.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47713" end_scan="47713" index="31504" precursor_neutral_mass="911.5234" retention_time_sec="2160.0378">
<search_result>
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<spectrum_query start_scan="47716" uncalibrated_precursor_neutral_mass="776.4198" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47716.47716.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47716" end_scan="47716" index="31507" precursor_neutral_mass="776.4198" retention_time_sec="2160.1484">
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<search_result>
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<spectrum_query start_scan="47720" uncalibrated_precursor_neutral_mass="1112.541" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47720.47720.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47720" end_scan="47720" index="31511" precursor_neutral_mass="1112.5381" retention_time_sec="2160.2961">
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<spectrum_query start_scan="47721" uncalibrated_precursor_neutral_mass="987.5261" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47721.47721.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47721" end_scan="47721" index="31512" precursor_neutral_mass="987.52466" retention_time_sec="2160.333">
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="47907" uncalibrated_precursor_neutral_mass="962.44916" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47907.47907.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47907" end_scan="47907" index="31689" precursor_neutral_mass="962.4476" retention_time_sec="2168.4495">
<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="47910" uncalibrated_precursor_neutral_mass="765.36835" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.47910.47910.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=47910" end_scan="47910" index="31691" precursor_neutral_mass="765.3673" retention_time_sec="2168.56">
<search_result>
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<search_result>
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</modification_info>
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<search_result>
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<search_result>
<search_hit peptide="QGFDQAPDR" massdiff="0.0" calc_neutral_pep_mass="1032.4624" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Papilin OS=Homo sapiens OX=9606 GN=PAPLN PE=2 SV=4" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="rev_sp|O95428|PPN_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="48005" uncalibrated_precursor_neutral_mass="1139.671" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48005.48005.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48005" end_scan="48005" index="31782" precursor_neutral_mass="1139.6666" retention_time_sec="2172.763">
<search_result>
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</search_score_summary>
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<spectrum_query start_scan="48011" uncalibrated_precursor_neutral_mass="869.4035" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48011.48011.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48011" end_scan="48011" index="31787" precursor_neutral_mass="869.4043" retention_time_sec="2173.1296">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="LVTCTGYHQVR">
<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Actin, gamma-enteric smooth muscle OS=Homo sapiens OX=9606 GN=ACTG2 PE=1 SV=1" protein="sp|P63267|ACTH_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
<alternative_protein protein_descr="Actin, alpha cardiac muscle 1 OS=Homo sapiens OX=9606 GN=ACTC1 PE=1 SV=1" protein="sp|P68032|ACTC_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
</search_hit>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="LSECSLTK" massdiff="-0.003662109375" calc_neutral_pep_mass="936.4586" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pseudouridylate synthase 7 homolog OS=Homo sapiens OX=9606 GN=PUS7 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|Q96PZ0|PUS7_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<spectrum_query start_scan="48102" uncalibrated_precursor_neutral_mass="1332.661" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48102.48102.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48102" end_scan="48102" index="31874" precursor_neutral_mass="1332.658" retention_time_sec="2176.9204">
<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<spectrum_query start_scan="48114" uncalibrated_precursor_neutral_mass="1198.622" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48114.48114.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48114" end_scan="48114" index="31885" precursor_neutral_mass="1198.6188" retention_time_sec="2177.5068">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="48115" uncalibrated_precursor_neutral_mass="1768.9829" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.48115.48115.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48115" end_scan="48115" index="31886" precursor_neutral_mass="1768.9806" retention_time_sec="2177.5435">
<search_result>
<search_hit peptide="VLATVTKPVGGDKNGGTR" massdiff="0.0010986328125" calc_neutral_pep_mass="1768.9795" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL6 OS=Homo sapiens OX=9606 GN=RPL6 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="34" hit_rank="1" num_matched_ions="11" protein="sp|Q02878|RL6_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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</analysis_result>
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<spectrum_query start_scan="48119" uncalibrated_precursor_neutral_mass="2190.0327" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.48119.48119.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48119" end_scan="48119" index="31890" precursor_neutral_mass="2190.0293" retention_time_sec="2177.6912">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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</search_score_summary>
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<search_result>
<search_hit peptide="GAVEKGEELSCEER" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1591.7147" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="14-3-3 protein sigma OS=Homo sapiens OX=9606 GN=SFN PE=1 SV=1" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="16" protein="sp|P31947|1433S_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="GAVEKGEELSCEER">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<modification_info modified_peptide="KVVGCSCVVVK">
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</modification_info>
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<spectrum_query start_scan="48130" uncalibrated_precursor_neutral_mass="1047.5211" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48130.48130.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48130" end_scan="48130" index="31900" precursor_neutral_mass="1047.525" retention_time_sec="2178.243">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="48300" uncalibrated_precursor_neutral_mass="2048.9595" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.48300.48300.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48300" end_scan="48300" index="32062" precursor_neutral_mass="2048.9595" retention_time_sec="2185.5615">
<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Actin, gamma-enteric smooth muscle OS=Homo sapiens OX=9606 GN=ACTG2 PE=1 SV=1" protein="sp|P63267|ACTH_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
<alternative_protein protein_descr="Actin, alpha cardiac muscle 1 OS=Homo sapiens OX=9606 GN=ACTC1 PE=1 SV=1" protein="sp|P68032|ACTC_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
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<alternative_protein protein_descr="Actin, cytoplasmic 2 OS=Homo sapiens OX=9606 GN=ACTG1 PE=1 SV=1" protein="sp|P63261|ACTG_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
<alternative_protein protein_descr="Actin, gamma-enteric smooth muscle OS=Homo sapiens OX=9606 GN=ACTG2 PE=1 SV=1" protein="sp|P63267|ACTH_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
<alternative_protein protein_descr="Actin, alpha cardiac muscle 1 OS=Homo sapiens OX=9606 GN=ACTC1 PE=1 SV=1" protein="sp|P68032|ACTC_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
<alternative_protein protein_descr="Actin, alpha skeletal muscle OS=Homo sapiens OX=9606 GN=ACTA1 PE=1 SV=1" protein="sp|P68133|ACTS_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
<alternative_protein protein_descr="Beta-actin-like protein 2 OS=Homo sapiens OX=9606 GN=ACTBL2 PE=1 SV=2" protein="sp|Q562R1|ACTBL_HUMAN" peptide_prev_aa="R" peptide_next_aa="D" num_tol_term="0"/>
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<search_result>
<search_hit peptide="IEVASSVK" massdiff="-0.0029296875" calc_neutral_pep_mass="831.47015" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens OX=9606 GN=ATP2A2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|P16615|AT2A2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="KIMVAMNPVK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1129.6351" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Homologous recombination OB-fold protein OS=Homo sapiens OX=9606 GN=HROB PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="5" protein="rev_sp|Q8N3J3|HROB_HUMAN" peptide_prev_aa="S" is_rejected="0">
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<spectrum_query start_scan="48432" uncalibrated_precursor_neutral_mass="1033.4231" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48432.48432.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48432" end_scan="48432" index="32188" precursor_neutral_mass="1033.4279" retention_time_sec="2191.1533">
<search_result>
<search_hit peptide="DHFEEAMR" massdiff="-8.544921875E-4" calc_neutral_pep_mass="1033.4287" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transitional endoplasmic reticulum ATPase OS=Homo sapiens OX=9606 GN=VCP PE=1 SV=4" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|P55072|TERA_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="48433" uncalibrated_precursor_neutral_mass="1108.5786" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48433.48433.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48433" end_scan="48433" index="32189" precursor_neutral_mass="1108.578" retention_time_sec="2191.19">
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<search_hit peptide="ETAEAYLGKK" massdiff="0.001708984375" calc_neutral_pep_mass="1108.5763" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Endoplasmic reticulum chaperone BiP OS=Homo sapiens OX=9606 GN=HSPA5 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="10" protein="sp|P11021|BIP_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_hit peptide="RYEVLKTENP" massdiff="0.0037841796875" calc_neutral_pep_mass="1247.6509" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Periplakin OS=Homo sapiens OX=9606 GN=PPL PE=1 SV=4" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="4" protein="sp|O60437|PEPL_HUMAN" peptide_prev_aa="Q" is_rejected="0">
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<search_result>
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<search_result>
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<search_hit peptide="YLENGKETLQR" massdiff="9.765625E-4" calc_neutral_pep_mass="1349.6938" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative HLA class I histocompatibility antigen, alpha chain H OS=Homo sapiens OX=9606 GN=HLA-H PE=5 SV=3" num_tot_proteins="4" tot_num_ions="20" hit_rank="1" num_matched_ions="7" protein="sp|P01893|HLAH_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="HLA class I histocompatibility antigen, A alpha chain OS=Homo sapiens OX=9606 GN=HLA-A PE=1 SV=2" protein="sp|P04439|HLAA_HUMAN" peptide_prev_aa="R" peptide_next_aa="T" num_tol_term="0"/>
<alternative_protein protein_descr="HLA class I histocompatibility antigen, C alpha chain OS=Homo sapiens OX=9606 GN=HLA-C PE=1 SV=3" protein="sp|P10321|HLAC_HUMAN" peptide_prev_aa="R" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="HLA class I histocompatibility antigen, alpha chain F OS=Homo sapiens OX=9606 GN=HLA-F PE=1 SV=3" protein="sp|P30511|HLAF_HUMAN" peptide_prev_aa="R" peptide_next_aa="A" num_tol_term="0"/>
<search_score name="hyperscore" value="12.83"/>
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<search_result>
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<search_hit peptide="DGEEAGAYDGPR" massdiff="0.001708984375" calc_neutral_pep_mass="1235.5054" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein disulfide-isomerase A3 OS=Homo sapiens OX=9606 GN=PDIA3 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="10" protein="sp|P30101|PDIA3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="KTEDIVAVQK" massdiff="0.0030517578125" calc_neutral_pep_mass="1129.6342" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neprilysin OS=Homo sapiens OX=9606 GN=MME PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="5" protein="sp|P08473|NEP_HUMAN" peptide_prev_aa="P" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="48609" uncalibrated_precursor_neutral_mass="830.4504" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.48609.48609.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=48609" end_scan="48609" index="32355" precursor_neutral_mass="830.4444" retention_time_sec="2198.853">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="DDDRTPGLHGDCDDDKYR" massdiff="0.00244140625" calc_neutral_pep_mass="2148.8765" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger protein-like 1 OS=Homo sapiens OX=9606 GN=ZFPL1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="34" hit_rank="1" num_matched_ions="16" protein="sp|O95159|ZFPL1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="49478" uncalibrated_precursor_neutral_mass="1370.6416" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.49478.49478.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=49478" end_scan="49478" index="33173" precursor_neutral_mass="1370.6423" retention_time_sec="2236.4426">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<spectrum_query start_scan="50399" uncalibrated_precursor_neutral_mass="931.501" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50399.50399.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50399" end_scan="50399" index="34042" precursor_neutral_mass="931.49725" retention_time_sec="2276.1743">
<search_result>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="50401" uncalibrated_precursor_neutral_mass="1207.5865" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50401.50401.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50401" end_scan="50401" index="34044" precursor_neutral_mass="1207.5837" retention_time_sec="2276.248">
<search_result>
<search_hit peptide="DLQQYQSQAK" massdiff="4.8828125E-4" calc_neutral_pep_mass="1207.5833" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Vesicle-trafficking protein SEC22b OS=Homo sapiens OX=9606 GN=SEC22B PE=1 SV=5" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|O75396|SC22B_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="50404" uncalibrated_precursor_neutral_mass="1200.558" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50404.50404.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50404" end_scan="50404" index="34047" precursor_neutral_mass="1200.5555" retention_time_sec="2276.359">
<search_result>
<search_hit peptide="MEEANIQPNR" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1200.5557" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Leucine-rich PPR motif-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=LRPPRC PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|P42704|LPPRC_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<spectrum_query start_scan="50405" uncalibrated_precursor_neutral_mass="980.45746" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50405.50405.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50405" end_scan="50405" index="34048" precursor_neutral_mass="980.45715" retention_time_sec="2276.3958">
<search_result>
<search_hit peptide="ESVFTNER" massdiff="8.544921875E-4" calc_neutral_pep_mass="980.4563" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens OX=9606 GN=BUD23 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="5" protein="sp|O43709|BUD23_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="9.541"/>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="50406" uncalibrated_precursor_neutral_mass="1135.5898" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50406.50406.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50406" end_scan="50406" index="34049" precursor_neutral_mass="1135.5901" retention_time_sec="2276.4329">
<search_result>
<search_hit peptide="LNLENKDYK" massdiff="0.0028076171875" calc_neutral_pep_mass="1135.5873" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens OX=9606 GN=EPRS1 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="12" protein="sp|P07814|SYEP_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="24.654"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="50407" uncalibrated_precursor_neutral_mass="799.4923" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50407.50407.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50407" end_scan="50407" index="34050" precursor_neutral_mass="799.49146" retention_time_sec="2276.4697">
<search_result>
<search_hit peptide="KDLVAVR" massdiff="-1.220703125E-4" calc_neutral_pep_mass="799.4916" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Choline transporter-like protein 2 OS=Homo sapiens OX=9606 GN=SLC44A2 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q8IWA5|CTL2_HUMAN" peptide_prev_aa="V" is_rejected="0">
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<spectrum_query start_scan="50413" uncalibrated_precursor_neutral_mass="904.51135" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50413.50413.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50413" end_scan="50413" index="34056" precursor_neutral_mass="904.5121" retention_time_sec="2276.6914">
<search_result>
<search_hit peptide="KAAEAFLR" massdiff="-9.1552734375E-4" calc_neutral_pep_mass="904.513" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX=9606 GN=BMS1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|Q14692|BMS1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="14.327"/>
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<spectrum_query start_scan="50416" uncalibrated_precursor_neutral_mass="847.41956" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50416.50416.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50416" end_scan="50416" index="34059" precursor_neutral_mass="847.42017" retention_time_sec="2276.802">
<search_result>
<search_hit peptide="LPNYDAR" massdiff="0.00140380859375" calc_neutral_pep_mass="847.41876" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA topoisomerase 2-beta OS=Homo sapiens OX=9606 GN=TOP2B PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q02880|TOP2B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="50420" uncalibrated_precursor_neutral_mass="914.4834" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50420.50420.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50420" end_scan="50420" index="34063" precursor_neutral_mass="914.47974" retention_time_sec="2276.9495">
<search_result>
<search_hit peptide="IPSSDQIR" massdiff="-0.00238037109375" calc_neutral_pep_mass="914.4821" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein ERGIC-53 OS=Homo sapiens OX=9606 GN=LMAN1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="7" protein="sp|P49257|LMAN1_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="50423" uncalibrated_precursor_neutral_mass="1348.7059" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.50423.50423.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50423" end_scan="50423" index="34065" precursor_neutral_mass="1348.7075" retention_time_sec="2277.208">
<search_result>
<search_hit peptide="LHPSPEEEKRK" massdiff="-0.0023193359375" calc_neutral_pep_mass="1348.7098" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small ribosomal subunit protein eS27 OS=Homo sapiens OX=9606 GN=RPS27 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="7" protein="sp|P42677|RS27_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<search_score name="expect" value="4.454314e-02"/>
<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="50424" uncalibrated_precursor_neutral_mass="914.4901" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50424.50424.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50424" end_scan="50424" index="34066" precursor_neutral_mass="914.483" retention_time_sec="2277.2456">
<search_result>
<search_hit peptide="IPSSDQIR" massdiff="8.544921875E-4" calc_neutral_pep_mass="914.4821" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein ERGIC-53 OS=Homo sapiens OX=9606 GN=LMAN1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P49257|LMAN1_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="50425" uncalibrated_precursor_neutral_mass="849.50757" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50425.50425.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50425" end_scan="50425" index="34067" precursor_neutral_mass="849.5082" retention_time_sec="2277.282">
<search_result>
<search_hit peptide="PVGHSLLK" massdiff="9.765625E-4" calc_neutral_pep_mass="849.5072" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nuclear pore complex protein Nup160 OS=Homo sapiens OX=9606 GN=NUP160 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q12769|NU160_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="LEQYKEESK" massdiff="-0.0010986328125" calc_neutral_pep_mass="1152.5662" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens OX=9606 GN=HNRNPU PE=1 SV=6" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q00839|HNRPU_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="50432" uncalibrated_precursor_neutral_mass="1177.5664" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50432.50432.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50432" end_scan="50432" index="34074" precursor_neutral_mass="1177.5646" retention_time_sec="2277.5403">
<search_result>
<search_hit peptide="LCTVNSVEEK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1177.5648" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Probable global transcription activator SNF2L2 OS=Homo sapiens OX=9606 GN=SMARCA2 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|P51531|SMCA2_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Transcription activator BRG1 OS=Homo sapiens OX=9606 GN=SMARCA4 PE=1 SV=2" protein="sp|P51532|SMCA4_HUMAN" peptide_prev_aa="R" peptide_next_aa="I" num_tol_term="0"/>
<modification_info modified_peptide="LCTVNSVEEK">
<mod_aminoacid_mass mass="160.03065" position="2"/>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="50439" uncalibrated_precursor_neutral_mass="1417.7161" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.50439.50439.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=50439" end_scan="50439" index="34081" precursor_neutral_mass="1417.7073" retention_time_sec="2277.798">
<search_result>
<search_hit peptide="QSSVTQVTEQSPK" massdiff="0.00244140625" calc_neutral_pep_mass="1417.7048" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger protein 638 OS=Homo sapiens OX=9606 GN=ZNF638 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="8" protein="sp|Q14966|ZN638_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<spectrum_query start_scan="51044" uncalibrated_precursor_neutral_mass="1231.5481" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.51044.51044.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51044" end_scan="51044" index="34650" precursor_neutral_mass="1231.5455" retention_time_sec="2304.1545">
<search_result>
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<spectrum_query start_scan="51049" uncalibrated_precursor_neutral_mass="945.48987" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.51049.51049.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51049" end_scan="51049" index="34655" precursor_neutral_mass="945.48694" retention_time_sec="2304.339">
<search_result>
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<search_result>
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<spectrum_query start_scan="51055" uncalibrated_precursor_neutral_mass="1004.4824" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.51055.51055.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51055" end_scan="51055" index="34661" precursor_neutral_mass="1004.4828" retention_time_sec="2304.5605">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="51056" uncalibrated_precursor_neutral_mass="871.4394" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.51056.51056.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51056" end_scan="51056" index="34662" precursor_neutral_mass="871.4372" retention_time_sec="2304.5974">
<search_result>
<search_hit peptide="PGDSDIIR" massdiff="-0.002685546875" calc_neutral_pep_mass="871.4399" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL30 OS=Homo sapiens OX=9606 GN=RPL30 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P62888|RL30_HUMAN" peptide_prev_aa="D" is_rejected="0">
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</search_score_summary>
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<search_result>
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<modification_info modified_peptide="NGSLICTASK">
<mod_aminoacid_mass mass="160.03065" position="6"/>
</modification_info>
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<search_result>
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<search_result>
<search_hit peptide="GDVTAEEAAGASPAK" massdiff="0.00341796875" calc_neutral_pep_mass="1372.647" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="MARCKS-related protein OS=Homo sapiens OX=9606 GN=MARCKSL1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="14" protein="sp|P49006|MRP_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="51075" uncalibrated_precursor_neutral_mass="726.42926" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.51075.51075.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51075" end_scan="51075" index="34679" precursor_neutral_mass="726.4282" retention_time_sec="2305.4333">
<search_result>
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<spectrum_query start_scan="51077" uncalibrated_precursor_neutral_mass="1422.5945" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.51077.51077.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51077" end_scan="51077" index="34681" precursor_neutral_mass="1422.592" retention_time_sec="2305.5068">
<search_result>
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<modification_info modified_peptide="ACIDSNEDGDLSK">
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<spectrum_query start_scan="51081" uncalibrated_precursor_neutral_mass="732.422" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.51081.51081.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51081" end_scan="51081" index="34685" precursor_neutral_mass="732.42035" retention_time_sec="2305.6545">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="MQVDPQKYK" massdiff="-0.0050048828125" calc_neutral_pep_mass="1135.5695" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Solute carrier family 25 member 3 OS=Homo sapiens OX=9606 GN=SLC25A3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q00325|S25A3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="51596" uncalibrated_precursor_neutral_mass="862.4582" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.51596.51596.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=51596" end_scan="51596" index="35170" precursor_neutral_mass="862.45996" retention_time_sec="2327.9077">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="TIELDGK" massdiff="-3.0517578125E-4" calc_neutral_pep_mass="774.4123" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ras-related protein Rab-8A OS=Homo sapiens OX=9606 GN=RAB8A PE=1 SV=1" num_tot_proteins="5" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P61006|RAB8A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_hit peptide="QAYTQFGGK" massdiff="0.003662109375" calc_neutral_pep_mass="998.4821" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Proteasome subunit alpha type-4 OS=Homo sapiens OX=9606 GN=PSMA4 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|P25789|PSA4_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_hit peptide="NSSTYWEGK" massdiff="1.220703125E-4" calc_neutral_pep_mass="1070.4668" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Threonine--tRNA ligase 1, cytoplasmic OS=Homo sapiens OX=9606 GN=TARS1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="13" protein="sp|P26639|SYTC_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="52277" uncalibrated_precursor_neutral_mass="787.4559" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.52277.52277.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=52277" end_scan="52277" index="35815" precursor_neutral_mass="787.45386" retention_time_sec="2357.179">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="53077" uncalibrated_precursor_neutral_mass="915.4347" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53077.53077.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53077" end_scan="53077" index="36568" precursor_neutral_mass="915.43646" retention_time_sec="2391.6924">
<search_result>
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<spectrum_query start_scan="53080" uncalibrated_precursor_neutral_mass="818.4334" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.53080.53080.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53080" end_scan="53080" index="36571" precursor_neutral_mass="818.43567" retention_time_sec="2391.8027">
<search_result>
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<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein L-like OS=Homo sapiens OX=9606 GN=HNRNPLL PE=1 SV=1" protein="sp|Q8WVV9|HNRLL_HUMAN" peptide_prev_aa="R" peptide_next_aa="Q" num_tol_term="0"/>
<modification_info modified_peptide="LNVCVSK">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="53083" uncalibrated_precursor_neutral_mass="1332.6318" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.53083.53083.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53083" end_scan="53083" index="36574" precursor_neutral_mass="1332.6201" retention_time_sec="2391.9136">
<search_result>
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<spectrum_query start_scan="53087" uncalibrated_precursor_neutral_mass="913.50037" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53087.53087.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53087" end_scan="53087" index="36578" precursor_neutral_mass="913.4988" retention_time_sec="2392.0605">
<search_result>
<search_hit peptide="ADLQAAAVR" massdiff="6.7138671875E-4" calc_neutral_pep_mass="913.4981" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein HGH1 homolog OS=Homo sapiens OX=9606 GN=HGH1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|Q9BTY7|HGH1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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</search_score_summary>
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<spectrum_query start_scan="53088" uncalibrated_precursor_neutral_mass="1709.6655" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53088.53088.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53088" end_scan="53088" index="36579" precursor_neutral_mass="1709.6622" retention_time_sec="2392.0977">
<search_result>
<search_hit peptide="CGVCEVCQQPECGK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1709.6628" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens OX=9606 GN=DNMT1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="9" protein="sp|P26358|DNMT1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<mod_aminoacid_mass mass="160.03065" position="7"/>
<mod_aminoacid_mass mass="160.03065" position="12"/>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="53094" uncalibrated_precursor_neutral_mass="770.4553" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53094.53094.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53094" end_scan="53094" index="36584" precursor_neutral_mass="770.4566" retention_time_sec="2392.4653">
<search_result>
<search_hit peptide="PVVELSK" massdiff="0.0028076171875" calc_neutral_pep_mass="770.4538" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Beta-adrenergic receptor kinase 1 OS=Homo sapiens OX=9606 GN=GRK2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="10" protein="sp|P25098|ARBK1_HUMAN" peptide_prev_aa="S" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="53102" uncalibrated_precursor_neutral_mass="863.4503" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53102.53102.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53102" end_scan="53102" index="36592" precursor_neutral_mass="863.44415" retention_time_sec="2392.7603">
<search_result>
<search_hit peptide="YVLQDAR" massdiff="-0.00592041015625" calc_neutral_pep_mass="863.4501" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Inactive serine protease 35 OS=Homo sapiens OX=9606 GN=PRSS35 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="rev_sp|Q8N3Z0|PRS35_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="YTH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=YTHDC1 PE=1 SV=3" protein="sp|Q96MU7|YTDC1_HUMAN" peptide_prev_aa="K" peptide_next_aa="F" num_tol_term="0"/>
<search_score name="hyperscore" value="12.313"/>
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<spectrum_query start_scan="53104" uncalibrated_precursor_neutral_mass="1073.5372" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53104.53104.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53104" end_scan="53104" index="36594" precursor_neutral_mass="1073.536" retention_time_sec="2392.834">
<search_result>
<search_hit peptide="LQELSAEER" massdiff="8.544921875E-4" calc_neutral_pep_mass="1073.5352" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Obg-like ATPase 1 OS=Homo sapiens OX=9606 GN=OLA1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|Q9NTK5|OLA1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="2.075533e-02"/>
<analysis_result analysis="peptideprophet">
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<parameter name="fval" value="1.276350"/>
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<spectrum_query start_scan="53108" uncalibrated_precursor_neutral_mass="953.5921" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53108.53108.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53108" end_scan="53108" index="36598" precursor_neutral_mass="953.5903" retention_time_sec="2392.9812">
<search_result>
<search_hit peptide="VIGTPVQIK" massdiff="-6.7138671875E-4" calc_neutral_pep_mass="953.59094" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transcription initiation factor TFIID subunit 4B OS=Homo sapiens OX=9606 GN=TAF4B PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|Q92750|TAF4B_HUMAN" peptide_prev_aa="P" is_rejected="0">
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<spectrum_query start_scan="53111" uncalibrated_precursor_neutral_mass="1332.6322" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53111.53111.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53111" end_scan="53111" index="36601" precursor_neutral_mass="1332.6323" retention_time_sec="2393.0918">
<search_result>
<search_hit peptide="ETAENYLGHTAK" massdiff="0.00146484375" calc_neutral_pep_mass="1332.6309" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Stress-70 protein, mitochondrial OS=Homo sapiens OX=9606 GN=HSPA9 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|P38646|GRP75_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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</search_hit>
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<spectrum_query start_scan="53112" uncalibrated_precursor_neutral_mass="1963.937" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.53112.53112.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53112" end_scan="53112" index="36602" precursor_neutral_mass="1963.935" retention_time_sec="2393.1287">
<search_result>
<search_hit peptide="KKGEDDKLILCDECNK" massdiff="8.544921875E-4" calc_neutral_pep_mass="1963.9342" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Tyrosine-protein kinase BAZ1B OS=Homo sapiens OX=9606 GN=BAZ1B PE=1 SV=2" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="9" protein="sp|Q9UIG0|BAZ1B_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="KKGEDDKLILCDECNK">
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<search_score name="expect" value="9.412628e-04"/>
<analysis_result analysis="peptideprophet">
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<parameter name="fval" value="1.488880"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="53114" uncalibrated_precursor_neutral_mass="1179.7158" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.53114.53114.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53114" end_scan="53114" index="36604" precursor_neutral_mass="1179.718" retention_time_sec="2393.2026">
<search_result>
<search_hit peptide="KIPIPGAGITGR" massdiff="1.004638671875" calc_neutral_pep_mass="1178.7134" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein MTSS 1 OS=Homo sapiens OX=9606 GN=MTSS1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="5" protein="rev_sp|O43312|MTSS1_HUMAN" peptide_prev_aa="T" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<parameter name="nmc" value="0"/>
<parameter name="massd" value="1.089183"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="LFCETCDR">
<mod_aminoacid_mass mass="160.03065" position="3"/>
<mod_aminoacid_mass mass="160.03065" position="6"/>
</modification_info>
<search_score name="hyperscore" value="12.163"/>
<search_score name="nextscore" value="9.428"/>
<search_score name="expect" value="3.587748e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.898571" all_ntt_prob="(0.898571,0.898571,0.898571)">
<search_score_summary>
<parameter name="fval" value="0.107287"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-2.109556"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53824" uncalibrated_precursor_neutral_mass="872.45056" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53824.53824.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53824" end_scan="53824" index="37279" precursor_neutral_mass="872.44714" retention_time_sec="2424.0293">
<search_result>
<search_hit peptide="YDVALHR" massdiff="-0.0032958984375" calc_neutral_pep_mass="872.45044" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Scavenger receptor class A member 5 OS=Homo sapiens OX=9606 GN=SCARA5 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="5" protein="sp|Q6ZMJ2|SCAR5_HUMAN" peptide_prev_aa="S" is_rejected="0">
<search_score name="hyperscore" value="9.546"/>
<search_score name="nextscore" value="9.414"/>
<search_score name="expect" value="9.328234e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.637514" all_ntt_prob="(0.637514,0.637514,0.637514)">
<search_score_summary>
<parameter name="fval" value="-0.223707"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-3.777749"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53830" uncalibrated_precursor_neutral_mass="1150.5641" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53830.53830.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53830" end_scan="53830" index="37284" precursor_neutral_mass="1150.5618" retention_time_sec="2424.3962">
<search_result>
<search_hit peptide="QVHPDTGISSK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1150.5619" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" num_tot_proteins="15" tot_num_ions="20" hit_rank="1" num_matched_ions="14" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type F-S OS=Homo sapiens OX=9606 GN=H2BC12L PE=1 SV=2" protein="sp|P57053|H2BFS_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-E OS=Homo sapiens OX=9606 GN=H2BC21 PE=1 SV=3" protein="sp|Q16778|H2B2E_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-L OS=Homo sapiens OX=9606 GN=H2BC13 PE=1 SV=3" protein="sp|Q99880|H2B1L_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<modification_info modified_peptide="Q[111]VHPDTGISSK">
<mod_aminoacid_mass mass="111.032074" position="1"/>
</modification_info>
<search_score name="hyperscore" value="26.987"/>
<search_score name="nextscore" value="14.251"/>
<search_score name="expect" value="4.308490e-05"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999995" all_ntt_prob="(0.999995,0.999995,0.999995)">
<search_score_summary>
<parameter name="fval" value="2.400850"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.106096"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53831" uncalibrated_precursor_neutral_mass="775.42664" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53831.53831.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53831" end_scan="53831" index="37285" precursor_neutral_mass="775.4259" retention_time_sec="2424.433">
<search_result>
<search_hit peptide="TVANMIK" massdiff="-3.0517578125E-4" calc_neutral_pep_mass="775.4262" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="S-phase kinase-associated protein 1 OS=Homo sapiens OX=9606 GN=SKP1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P63208|SKP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="13.472"/>
<search_score name="nextscore" value="11.937"/>
<search_score name="expect" value="1.031209e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.965880" all_ntt_prob="(0.965880,0.965880,0.965880)">
<search_score_summary>
<parameter name="fval" value="0.376087"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.393559"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53832" uncalibrated_precursor_neutral_mass="1106.5243" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53832.53832.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53832" end_scan="53832" index="37286" precursor_neutral_mass="1106.5236" retention_time_sec="2424.4702">
<search_result>
<search_hit peptide="AIEPNDYTGK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1106.5243" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Gamma-glutamylcyclotransferase OS=Homo sapiens OX=9606 GN=GGCT PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|O75223|GGCT_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="19.291"/>
<search_score name="nextscore" value="13.229"/>
<search_score name="expect" value="1.359148e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999882" all_ntt_prob="(0.999882,0.999882,0.999882)">
<search_score_summary>
<parameter name="fval" value="1.657190"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.661912"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53838" uncalibrated_precursor_neutral_mass="680.42285" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.53838.53838.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53838" end_scan="53838" index="37292" precursor_neutral_mass="680.42267" retention_time_sec="2424.6917">
<search_result>
<search_hit peptide="PAPAVVK" massdiff="6.103515625E-4" calc_neutral_pep_mass="680.42206" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL8 OS=Homo sapiens OX=9606 GN=RPL7A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="10" protein="sp|P62424|RL7A_HUMAN" peptide_prev_aa="A" is_rejected="0">
<search_score name="hyperscore" value="19.659"/>
<search_score name="nextscore" value="16.404"/>
<search_score name="expect" value="3.508634e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.953796" all_ntt_prob="(0.953796,0.953796,0.953796)">
<search_score_summary>
<parameter name="fval" value="0.303837"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.897019"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53843" uncalibrated_precursor_neutral_mass="1083.5931" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53843.53843.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53843" end_scan="53843" index="37297" precursor_neutral_mass="1083.5917" retention_time_sec="2424.8757">
<search_result>
<search_hit peptide="VLAPEGSVANK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1083.5923" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ras GTPase-activating protein-binding protein 1 OS=Homo sapiens OX=9606 GN=G3BP1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="sp|Q13283|G3BP1_HUMAN" peptide_prev_aa="F" is_rejected="0">
<search_score name="hyperscore" value="12.682"/>
<search_score name="nextscore" value="0.0"/>
<search_score name="expect" value="6.264147e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.956335" all_ntt_prob="(0.956335,0.956335,0.956335)">
<search_score_summary>
<parameter name="fval" value="0.317468"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.563267"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53851" uncalibrated_precursor_neutral_mass="1150.564" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.53851.53851.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53851" end_scan="53851" index="37305" precursor_neutral_mass="1150.561" retention_time_sec="2425.1711">
<search_result>
<search_hit peptide="QVHPDTGISSK" massdiff="-8.544921875E-4" calc_neutral_pep_mass="1150.5619" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-K OS=Homo sapiens OX=9606 GN=H2BC12 PE=1 SV=3" num_tot_proteins="15" tot_num_ions="20" hit_rank="1" num_matched_ions="13" protein="sp|O60814|H2B1K_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type F-S OS=Homo sapiens OX=9606 GN=H2BC12L PE=1 SV=2" protein="sp|P57053|H2BFS_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-E OS=Homo sapiens OX=9606 GN=H2BC21 PE=1 SV=3" protein="sp|Q16778|H2B2E_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 2-F OS=Homo sapiens OX=9606 GN=H2BC18 PE=1 SV=3" protein="sp|Q5QNW6|H2B2F_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 3-B OS=Homo sapiens OX=9606 GN=H2BC26 PE=1 SV=3" protein="sp|Q8N257|H2B3B_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-H OS=Homo sapiens OX=9606 GN=H2BC9 PE=1 SV=3" protein="sp|Q93079|H2B1H_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-A OS=Homo sapiens OX=9606 GN=H2BC1 PE=1 SV=3" protein="sp|Q96A08|H2B1A_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-M OS=Homo sapiens OX=9606 GN=H2BC14 PE=1 SV=3" protein="sp|Q99879|H2B1M_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-L OS=Homo sapiens OX=9606 GN=H2BC13 PE=1 SV=3" protein="sp|Q99880|H2B1L_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
<modification_info modified_peptide="Q[111]VHPDTGISSK">
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</modification_info>
<search_score name="hyperscore" value="25.117"/>
<search_score name="nextscore" value="12.076"/>
<search_score name="expect" value="1.646194e-05"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999992" all_ntt_prob="(0.999992,0.999992,0.999992)">
<search_score_summary>
<parameter name="fval" value="2.280800"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.742674"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53854" uncalibrated_precursor_neutral_mass="1031.5889" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53854.53854.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53854" end_scan="53854" index="37307" precursor_neutral_mass="1031.5864" retention_time_sec="2425.4268">
<search_result>
<search_hit peptide="YRPGTVALR" massdiff="-0.0010986328125" calc_neutral_pep_mass="1031.5875" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H3.1 OS=Homo sapiens OX=9606 GN=H3C1 PE=1 SV=2" num_tot_proteins="6" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|P68431|H31_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Histone H3.3 OS=Homo sapiens OX=9606 GN=H3-3A PE=1 SV=2" protein="sp|P84243|H33_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H3.1t OS=Homo sapiens OX=9606 GN=H3-4 PE=1 SV=3" protein="sp|Q16695|H31T_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H3-7 OS=Homo sapiens OX=9606 GN=H3-7 PE=1 SV=1" protein="sp|Q5TEC6|H37_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H3.3C OS=Homo sapiens OX=9606 GN=H3-5 PE=1 SV=3" protein="sp|Q6NXT2|H3C_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H3.2 OS=Homo sapiens OX=9606 GN=H3C15 PE=1 SV=3" protein="sp|Q71DI3|H32_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<search_score name="hyperscore" value="18.782"/>
<search_score name="nextscore" value="14.205"/>
<search_score name="expect" value="4.479203e-02"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.997768" all_ntt_prob="(0.997768,0.997768,0.997768)">
<search_score_summary>
<parameter name="fval" value="0.988001"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.064992"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="53855" uncalibrated_precursor_neutral_mass="866.46436" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53855.53855.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53855" end_scan="53855" index="37308" precursor_neutral_mass="866.4651" retention_time_sec="2425.4634">
<search_result>
<search_hit peptide="FNFSKPK" massdiff="6.103515625E-5" calc_neutral_pep_mass="866.465" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens OX=9606 GN=AHNAK PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q09666|AHNK_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="13.457"/>
<search_score name="nextscore" value="11.559"/>
<search_score name="expect" value="1.058449e+00"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.970621" all_ntt_prob="(0.970621,0.970621,0.970621)">
<search_score_summary>
<parameter name="fval" value="0.410992"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.070442"/>
<parameter name="isomassd" value="0"/>
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<spectrum_query start_scan="53856" uncalibrated_precursor_neutral_mass="1211.4884" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.53856.53856.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=53856" end_scan="53856" index="37309" precursor_neutral_mass="1211.4863" retention_time_sec="2425.501">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="54089" uncalibrated_precursor_neutral_mass="879.3979" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.54089.54089.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=54089" end_scan="54089" index="37530" precursor_neutral_mass="879.3978" retention_time_sec="2435.3892">
<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="54104" uncalibrated_precursor_neutral_mass="1082.6465" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.54104.54104.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=54104" end_scan="54104" index="37544" precursor_neutral_mass="1082.6469" retention_time_sec="2436.1633">
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<search_result>
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</search_score_summary>
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<search_result>
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<search_result>
<search_hit peptide="QHCAYTIAK" massdiff="6.103515625E-4" calc_neutral_pep_mass="1073.4963" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Hydroxysteroid dehydrogenase-like protein 2 OS=Homo sapiens OX=9606 GN=HSDL2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="11" protein="sp|Q6YN16|HSDL2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<mod_aminoacid_mass mass="111.032074" position="1"/>
<mod_aminoacid_mass mass="160.03065" position="3"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="SVKEDSNLTLQEK" massdiff="8.544921875E-4" calc_neutral_pep_mass="1489.7623" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens OX=9606 GN=IQGAP1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="7" protein="sp|P46940|IQGA1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="13.534"/>
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<search_hit peptide="SHAVLLVK" massdiff="8.544921875E-4" calc_neutral_pep_mass="865.5385" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Kinesin-like protein KIF22 OS=Homo sapiens OX=9606 GN=KIF22 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|Q14807|KIF22_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="55609" uncalibrated_precursor_neutral_mass="1244.5636" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.55609.55609.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55609" end_scan="55609" index="38959" precursor_neutral_mass="1244.5602" retention_time_sec="2501.1604">
<search_result>
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<spectrum_query start_scan="55611" uncalibrated_precursor_neutral_mass="1083.455" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.55611.55611.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55611" end_scan="55611" index="38961" precursor_neutral_mass="1083.4534" retention_time_sec="2501.2341">
<search_result>
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<search_result>
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<search_result>
<search_hit peptide="SGPKPFSAPKPQTSPSPK" massdiff="-0.001708984375" calc_neutral_pep_mass="1836.9733" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Adenylyl cyclase-associated protein 1 OS=Homo sapiens OX=9606 GN=CAP1 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="34" hit_rank="1" num_matched_ions="11" protein="sp|Q01518|CAP1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_hit peptide="EDSNLTLQEK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1175.5669" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens OX=9606 GN=IQGAP1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="9" protein="sp|P46940|IQGA1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="55636" uncalibrated_precursor_neutral_mass="1351.6205" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.55636.55636.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55636" end_scan="55636" index="38984" precursor_neutral_mass="1351.6183" retention_time_sec="2502.3015">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="55638" uncalibrated_precursor_neutral_mass="871.47644" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.55638.55638.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55638" end_scan="55638" index="38986" precursor_neutral_mass="871.47546" retention_time_sec="2502.3755">
<search_result>
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</search_score_summary>
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<spectrum_query start_scan="55642" uncalibrated_precursor_neutral_mass="1283.746" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.55642.55642.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55642" end_scan="55642" index="38989" precursor_neutral_mass="1283.7441" retention_time_sec="2502.6687">
<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</search_hit>
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<spectrum_query start_scan="55644" uncalibrated_precursor_neutral_mass="1134.6157" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.55644.55644.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55644" end_scan="55644" index="38991" precursor_neutral_mass="1134.615" retention_time_sec="2502.7424">
<search_result>
<search_hit peptide="KEVAGPHLER" massdiff="4.8828125E-4" calc_neutral_pep_mass="1134.6145" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="PDZ domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PDZD2 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="6" protein="sp|O15018|PDZD2_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<spectrum_query start_scan="55645" uncalibrated_precursor_neutral_mass="936.49445" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.55645.55645.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55645" end_scan="55645" index="38992" precursor_neutral_mass="936.49176" retention_time_sec="2502.7795">
<search_result>
<search_hit peptide="LYEQLSGK" massdiff="1.220703125E-4" calc_neutral_pep_mass="936.49164" peptide_next_aa="-" num_missed_cleavages="0" num_tol_term="0" protein_descr="Phosphatidylethanolamine-binding protein 1 OS=Homo sapiens OX=9606 GN=PEBP1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P30086|PEBP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="55646" uncalibrated_precursor_neutral_mass="1385.6736" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.55646.55646.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55646" end_scan="55646" index="38993" precursor_neutral_mass="1385.6715" retention_time_sec="2502.8164">
<search_result>
<search_hit peptide="TLVGICSEHQSR" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1385.6721" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein unc-45 homolog A OS=Homo sapiens OX=9606 GN=UNC45A PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="6" protein="sp|Q9H3U1|UN45A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<mod_aminoacid_mass mass="160.03065" position="6"/>
</modification_info>
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<search_result>
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<search_result>
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<spectrum_query start_scan="55653" uncalibrated_precursor_neutral_mass="772.3916" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.55653.55653.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=55653" end_scan="55653" index="39000" precursor_neutral_mass="772.3894" retention_time_sec="2503.0745">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="RGDIIGVQGNPGK" massdiff="6.103515625E-4" calc_neutral_pep_mass="1309.7102" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Lysine--tRNA ligase OS=Homo sapiens OX=9606 GN=KARS1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="15" protein="sp|Q15046|SYK_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="56756" uncalibrated_precursor_neutral_mass="1551.8254" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.56756.56756.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=56756" end_scan="56756" index="40042" precursor_neutral_mass="1551.8242" retention_time_sec="2550.7173">
<search_result>
<search_hit peptide="IKSEHPGLSIGDTAK" massdiff="-0.0013427734375" calc_neutral_pep_mass="1551.8256" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="High mobility group protein B2 OS=Homo sapiens OX=9606 GN=HMGB2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="8" protein="sp|P26583|HMGB2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="56790" uncalibrated_precursor_neutral_mass="1944.0443" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.56790.56790.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=56790" end_scan="56790" index="40074" precursor_neutral_mass="1944.046" retention_time_sec="2552.2336">
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</modification_info>
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<search_result>
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<search_result>
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<spectrum_query start_scan="56841" uncalibrated_precursor_neutral_mass="1114.6201" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.56841.56841.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=56841" end_scan="56841" index="40123" precursor_neutral_mass="1114.6232" retention_time_sec="2554.4038">
<search_result>
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<spectrum_query start_scan="56842" uncalibrated_precursor_neutral_mass="1016.5166" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.56842.56842.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=56842" end_scan="56842" index="40124" precursor_neutral_mass="1016.5145" retention_time_sec="2554.4404">
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<spectrum_query start_scan="56844" uncalibrated_precursor_neutral_mass="1652.7756" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.56844.56844.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=56844" end_scan="56844" index="40126" precursor_neutral_mass="1652.7695" retention_time_sec="2554.5137">
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<search_result>
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</analysis_result>
</search_hit>
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<spectrum_query start_scan="57241" uncalibrated_precursor_neutral_mass="2080.0415" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.57241.57241.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=57241" end_scan="57241" index="40503" precursor_neutral_mass="2080.0374" retention_time_sec="2571.789">
<search_result>
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</peptideprophet_result>
</analysis_result>
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<search_result>
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<modification_info modified_peptide="YVECSALTQK">
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="TLQSLACGK">
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<modification_info modified_peptide="FACHSASLTVR">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="DDLSGADIK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="932.44507" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="26S proteasome regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PSMC1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|P62191|PRS4_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="KAIAPSPS" massdiff="-2.44140625E-4" calc_neutral_pep_mass="769.43335" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc fingers and homeoboxes protein 2 OS=Homo sapiens OX=9606 GN=ZHX2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q9Y6X8|ZHX2_HUMAN" peptide_prev_aa="S" is_rejected="0">
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<search_result>
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<spectrum_query start_scan="57275" uncalibrated_precursor_neutral_mass="878.45544" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.57275.57275.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=57275" end_scan="57275" index="40535" precursor_neutral_mass="878.45447" retention_time_sec="2573.1895">
<search_result>
<search_hit peptide="ASLCISTK" massdiff="0.00128173828125" calc_neutral_pep_mass="878.4532" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Poly [ADP-ribose] polymerase 1 OS=Homo sapiens OX=9606 GN=PARP1 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P09874|PARP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="YESHPVCADLQAK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1516.698" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="MICOS complex subunit MIC19 OS=Homo sapiens OX=9606 GN=CHCHD3 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="7" protein="sp|Q9NX63|MIC19_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="57882" uncalibrated_precursor_neutral_mass="1709.8594" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.57882.57882.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=57882" end_scan="57882" index="41110" precursor_neutral_mass="1709.8567" retention_time_sec="2599.5535">
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<spectrum_query start_scan="57884" uncalibrated_precursor_neutral_mass="1202.6437" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.57884.57884.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=57884" end_scan="57884" index="41112" precursor_neutral_mass="1202.6444" retention_time_sec="2599.6272">
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<search_result>
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<spectrum_query start_scan="57893" uncalibrated_precursor_neutral_mass="998.43726" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.57893.57893.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=57893" end_scan="57893" index="41121" precursor_neutral_mass="998.4356" retention_time_sec="2599.9592">
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<search_result>
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<spectrum_query start_scan="57903" uncalibrated_precursor_neutral_mass="883.51306" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.57903.57903.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=57903" end_scan="57903" index="41131" precursor_neutral_mass="883.51074" retention_time_sec="2600.328">
<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="RGETESEEFEKLK" massdiff="0.021728515625" calc_neutral_pep_mass="1580.7681" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Caldesmon OS=Homo sapiens OX=9606 GN=CALD1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="13" protein="sp|Q05682|CALD1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="58017" uncalibrated_precursor_neutral_mass="1203.5188" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.58017.58017.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=58017" end_scan="58017" index="41240" precursor_neutral_mass="1203.5186" retention_time_sec="2605.2888">
<search_result>
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<search_result>
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<modification_info modified_peptide="FNAHGDANTIVCNSK">
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<search_result>
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<spectrum_query start_scan="58026" uncalibrated_precursor_neutral_mass="1171.6444" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.58026.58026.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=58026" end_scan="58026" index="41248" precursor_neutral_mass="1171.6438" retention_time_sec="2605.7666">
<search_result>
<search_hit peptide="LKELEVAEGGK" massdiff="-9.765625E-4" calc_neutral_pep_mass="1171.6448" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Hsp90 co-chaperone Cdc37 OS=Homo sapiens OX=9606 GN=CDC37 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|Q16543|CDC37_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="58027" uncalibrated_precursor_neutral_mass="1882.8954" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.58027.58027.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=58027" end_scan="58027" index="41249" precursor_neutral_mass="1882.8948" retention_time_sec="2605.8035">
<search_result>
<search_hit peptide="LNFSHGTHEYHAETIK" massdiff="-0.0013427734375" calc_neutral_pep_mass="1882.8961" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pyruvate kinase PKM OS=Homo sapiens OX=9606 GN=PKM PE=1 SV=4" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="25" protein="sp|P14618|KPYM_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="58029" uncalibrated_precursor_neutral_mass="986.53894" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.58029.58029.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=58029" end_scan="58029" index="41251" precursor_neutral_mass="986.54034" retention_time_sec="2605.877">
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<search_hit peptide="SPTDLAR" massdiff="2.44140625E-4" calc_neutral_pep_mass="758.3923" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="E3 ubiquitin-protein ligase MARCHF2 OS=Homo sapiens OX=9606 GN=MARCHF2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q9P0N8|MARH2_HUMAN" peptide_prev_aa="D" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="LSGTIHAGQPVK" massdiff="0.002685546875" calc_neutral_pep_mass="1206.672" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=EFTUD2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="11" protein="sp|Q15029|U5S1_HUMAN" peptide_prev_aa="V" is_rejected="0">
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<search_result>
<search_hit peptide="MLLQSSEGR" massdiff="-0.0028076171875" calc_neutral_pep_mass="1019.50696" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=SNRNP200 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|O75643|U520_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_hit peptide="FTQQDIDEAK" massdiff="0.0040283203125" calc_neutral_pep_mass="1193.5564" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Presequence protease, mitochondrial OS=Homo sapiens OX=9606 GN=PITRM1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="8" protein="sp|Q5JRX3|PREP_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</peptideprophet_result>
</analysis_result>
</search_hit>
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<search_result>
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="59186" uncalibrated_precursor_neutral_mass="1088.5271" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.59186.59186.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59186" end_scan="59186" index="42347" precursor_neutral_mass="1088.5253" retention_time_sec="2655.6655">
<search_result>
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<spectrum_query start_scan="59191" uncalibrated_precursor_neutral_mass="1275.5416" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.59191.59191.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59191" end_scan="59191" index="42352" precursor_neutral_mass="1275.5406" retention_time_sec="2655.8494">
<search_result>
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<spectrum_query start_scan="59192" uncalibrated_precursor_neutral_mass="1071.5256" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.59192.59192.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59192" end_scan="59192" index="42353" precursor_neutral_mass="1071.5354" retention_time_sec="2655.8865">
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<search_hit peptide="IQAGEVSQPSKEQLEK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1769.9158" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Partner of Y14 and mago OS=Homo sapiens OX=9606 GN=PYM1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="14" protein="sp|Q9BRP8|PYM1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="YAGGNPVCVRPTPK" massdiff="-0.001708984375" calc_neutral_pep_mass="1514.7664" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="PCNA-associated factor OS=Homo sapiens OX=9606 GN=PCLAF PE=1 SV=1" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="11" protein="sp|Q15004|PAF15_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="YAGGNPVCVRPTPK">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="LSASLLHSHDTETR" massdiff="0.0" calc_neutral_pep_mass="1565.7797" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Prolactin regulatory element-binding protein OS=Homo sapiens OX=9606 GN=PREB PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="9" protein="sp|Q9HCU5|PREB_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="TIQGHLQSENFK" massdiff="-0.0018310546875" calc_neutral_pep_mass="1400.7047" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens OX=9606 GN=U2SURP PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|O15042|SR140_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_hit peptide="VVLIGGKPDR" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1052.6342" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens OX=9606 GN=HNRNPK PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="4" protein="sp|P61978|HNRPK_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="QCVLMVQSPSKQR" massdiff="3.662109375E-4" calc_neutral_pep_mass="1542.7646" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative uncharacterized protein IBA57-DT OS=Homo sapiens OX=9606 GN=IBA57-DT PE=5 SV=1" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="5" protein="sp|B1ANH7|IBADT_HUMAN" peptide_prev_aa="T" is_rejected="0">
<modification_info modified_peptide="Q[111]CVLMVQSPSKQR">
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<spectrum_query start_scan="59216" uncalibrated_precursor_neutral_mass="1033.4924" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.59216.59216.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59216" end_scan="59216" index="42376" precursor_neutral_mass="1033.4916" retention_time_sec="2656.9163">
<search_result>
<search_hit peptide="ADLEGSLDSK" massdiff="-0.0010986328125" calc_neutral_pep_mass="1033.4927" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Leucine--tRNA ligase, mitochondrial OS=Homo sapiens OX=9606 GN=LARS2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|Q15031|SYLM_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="59217" uncalibrated_precursor_neutral_mass="879.48566" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.59217.59217.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59217" end_scan="59217" index="42377" precursor_neutral_mass="879.4814" retention_time_sec="2656.9531">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<spectrum_query start_scan="59857" uncalibrated_precursor_neutral_mass="1850.7927" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.59857.59857.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59857" end_scan="59857" index="42983" precursor_neutral_mass="1850.7903" retention_time_sec="2684.5623">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<spectrum_query start_scan="59897" uncalibrated_precursor_neutral_mass="862.37494" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.59897.59897.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=59897" end_scan="59897" index="43021" precursor_neutral_mass="862.3734" retention_time_sec="2686.3152">
<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<alternative_protein protein_descr="Tubulin beta chain OS=Homo sapiens OX=9606 GN=TUBB PE=1 SV=2" protein="sp|P07437|TBB5_HUMAN" peptide_prev_aa="K" peptide_next_aa="G" num_tol_term="0"/>
<alternative_protein protein_descr="Tubulin beta-4B chain OS=Homo sapiens OX=9606 GN=TUBB4B PE=1 SV=1" protein="sp|P68371|TBB4B_HUMAN" peptide_prev_aa="K" peptide_next_aa="G" num_tol_term="0"/>
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<search_result>
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<spectrum_query start_scan="60063" uncalibrated_precursor_neutral_mass="819.46277" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60063.60063.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60063" end_scan="60063" index="43180" precursor_neutral_mass="819.4604" retention_time_sec="2693.4453">
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<spectrum_query start_scan="60065" uncalibrated_precursor_neutral_mass="1310.6451" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60065.60065.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60065" end_scan="60065" index="43182" precursor_neutral_mass="1310.648" retention_time_sec="2693.5193">
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<spectrum_query start_scan="60070" uncalibrated_precursor_neutral_mass="1272.625" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60070.60070.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60070" end_scan="60070" index="43187" precursor_neutral_mass="1272.622" retention_time_sec="2693.7039">
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<spectrum_query start_scan="60072" uncalibrated_precursor_neutral_mass="1477.7446" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60072.60072.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60072" end_scan="60072" index="43189" precursor_neutral_mass="1477.7628" retention_time_sec="2693.7778">
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<search_hit peptide="SSTVATLQGTPDHGDPR" massdiff="9.765625E-4" calc_neutral_pep_mass="1737.8281" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Mitotic interactor and substrate of PLK1 OS=Homo sapiens OX=9606 GN=MISP PE=1 SV=1" num_tot_proteins="1" tot_num_ions="32" hit_rank="1" num_matched_ions="6" protein="sp|Q8IVT2|MISP_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="60100" uncalibrated_precursor_neutral_mass="943.4707" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60100.60100.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60100" end_scan="60100" index="43215" precursor_neutral_mass="943.4709" retention_time_sec="2694.9558">
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<alternative_protein protein_descr="Endoplasmic reticulum chaperone BiP OS=Homo sapiens OX=9606 GN=HSPA5 PE=1 SV=2" protein="sp|P11021|BIP_HUMAN" peptide_prev_aa="R" peptide_next_aa="I" num_tol_term="0"/>
<alternative_protein protein_descr="Heat shock cognate 71 kDa protein OS=Homo sapiens OX=9606 GN=HSPA8 PE=1 SV=1" protein="sp|P11142|HSP7C_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
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<search_result>
<search_hit peptide="QIEHTLNEK" massdiff="-0.001220703125" calc_neutral_pep_mass="1093.5404" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="cAMP-dependent protein kinase catalytic subunit alpha OS=Homo sapiens OX=9606 GN=PRKACA PE=1 SV=2" num_tot_proteins="2" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P17612|KAPCA_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="60124" uncalibrated_precursor_neutral_mass="1529.759" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60124.60124.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60124" end_scan="60124" index="43238" precursor_neutral_mass="1529.7566" retention_time_sec="2695.9883">
<search_result>
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<spectrum_query start_scan="60126" uncalibrated_precursor_neutral_mass="778.5067" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60126.60126.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60126" end_scan="60126" index="43240" precursor_neutral_mass="778.50757" retention_time_sec="2696.062">
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<spectrum_query start_scan="60127" uncalibrated_precursor_neutral_mass="1785.8397" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60127.60127.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60127" end_scan="60127" index="43241" precursor_neutral_mass="1785.8386" retention_time_sec="2696.0989">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="60132" uncalibrated_precursor_neutral_mass="1001.5163" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60132.60132.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60132" end_scan="60132" index="43245" precursor_neutral_mass="1001.514" retention_time_sec="2696.4282">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="60281" uncalibrated_precursor_neutral_mass="1398.7151" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60281.60281.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60281" end_scan="60281" index="43387" precursor_neutral_mass="1398.7139" retention_time_sec="2702.7812">
<search_result>
<search_hit peptide="RKLTFDEEAYK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1398.7142" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Oxidoreductase HTATIP2 OS=Homo sapiens OX=9606 GN=HTATIP2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="9" protein="sp|Q9BUP3|HTAI2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="60282" uncalibrated_precursor_neutral_mass="902.4694" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60282.60282.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60282" end_scan="60282" index="43388" precursor_neutral_mass="902.46796" retention_time_sec="2702.8184">
<search_result>
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<spectrum_query start_scan="60284" uncalibrated_precursor_neutral_mass="925.53937" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60284.60284.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60284" end_scan="60284" index="43390" precursor_neutral_mass="925.5362" retention_time_sec="2702.892">
<search_result>
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="60287" uncalibrated_precursor_neutral_mass="971.57104" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60287.60287.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60287" end_scan="60287" index="43393" precursor_neutral_mass="971.56903" retention_time_sec="2703.003">
<search_result>
<search_hit peptide="KDEVLAVAK" massdiff="0.00390625" calc_neutral_pep_mass="971.5651" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein moonraker OS=Homo sapiens OX=9606 GN=KIAA0753 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="sp|Q2KHM9|MOONR_HUMAN" peptide_prev_aa="F" is_rejected="0">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="60288" uncalibrated_precursor_neutral_mass="801.4355" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60288.60288.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60288" end_scan="60288" index="43394" precursor_neutral_mass="801.4349" retention_time_sec="2703.04">
<search_result>
<search_hit peptide="NLESALR" massdiff="4.2724609375E-4" calc_neutral_pep_mass="801.43445" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative keratin-87 protein OS=Homo sapiens OX=9606 GN=KRT87P PE=5 SV=4" num_tot_proteins="6" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="rev_sp|A6NCN2|KR87P_HUMAN" peptide_prev_aa="H" is_rejected="0">
<alternative_protein protein_descr="Keratin, type II cuticular Hb6 OS=Homo sapiens OX=9606 GN=KRT86 PE=1 SV=1" protein="rev_sp|O43790|KRT86_HUMAN" peptide_prev_aa="H" peptide_next_aa="G" num_tol_term="0"/>
<alternative_protein protein_descr="Keratin, type II cuticular Hb3 OS=Homo sapiens OX=9606 GN=KRT83 PE=1 SV=2" protein="rev_sp|P78385|KRT83_HUMAN" peptide_prev_aa="H" peptide_next_aa="G" num_tol_term="0"/>
<alternative_protein protein_descr="Keratin, type II cuticular Hb5 OS=Homo sapiens OX=9606 GN=KRT85 PE=1 SV=1" protein="rev_sp|P78386|KRT85_HUMAN" peptide_prev_aa="H" peptide_next_aa="G" num_tol_term="0"/>
<alternative_protein protein_descr="Keratin, type II cuticular Hb1 OS=Homo sapiens OX=9606 GN=KRT81 PE=1 SV=3" protein="rev_sp|Q14533|KRT81_HUMAN" peptide_prev_aa="H" peptide_next_aa="G" num_tol_term="0"/>
<alternative_protein protein_descr="Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC1H1 PE=1 SV=5" protein="sp|Q14204|DYHC1_HUMAN" peptide_prev_aa="K" peptide_next_aa="F" num_tol_term="0"/>
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<search_result>
<search_hit peptide="ENGVIYQTFCDMTSGGGG" massdiff="-0.0062255859375" calc_neutral_pep_mass="1891.7716" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Intelectin-1 OS=Homo sapiens OX=9606 GN=ITLN1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="34" hit_rank="1" num_matched_ions="6" protein="sp|Q8WWA0|ITLN1_HUMAN" peptide_prev_aa="T" is_rejected="0">
<modification_info modified_peptide="ENGVIYQTFCDMTSGGGG">
<mod_aminoacid_mass mass="160.03065" position="10"/>
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<search_result>
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<search_result>
<search_hit peptide="IGYALAK" massdiff="0.0010986328125" calc_neutral_pep_mass="734.4326" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Monocarboxylate transporter 12 OS=Homo sapiens OX=9606 GN=SLC16A12 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="rev_sp|Q6ZSM3|MOT12_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<search_result>
<search_hit peptide="CLAPLAK" massdiff="0.004638671875" calc_neutral_pep_mass="771.4313" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens OX=9606 GN=GAPDHS PE=1 SV=2" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|O14556|G3PT_HUMAN" peptide_prev_aa="N" is_rejected="0">
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<modification_info modified_peptide="CLAPLAK">
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<spectrum_query start_scan="60300" uncalibrated_precursor_neutral_mass="1149.6426" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60300.60300.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60300" end_scan="60300" index="43405" precursor_neutral_mass="1149.6613" retention_time_sec="2703.6294">
<search_result>
<search_hit peptide="VLIAAHGNSLR" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1149.6617" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Phosphoglycerate mutase 2 OS=Homo sapiens OX=9606 GN=PGAM2 PE=1 SV=3" num_tot_proteins="2" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|P15259|PGAM2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="IEPHHTAVLGEGDSVQVENKDPKR" massdiff="0.00537109375" calc_neutral_pep_mass="2654.341" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pirin OS=Homo sapiens OX=9606 GN=PIR PE=1 SV=1" num_tot_proteins="1" tot_num_ions="46" hit_rank="1" num_matched_ions="8" protein="sp|O00625|PIR_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="CVEENNGVAK" massdiff="1.220703125E-4" calc_neutral_pep_mass="1101.4761" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neutral amino acid transporter B(0) OS=Homo sapiens OX=9606 GN=SLC1A5 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="7" protein="sp|Q15758|AAAT_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="C[143]VEENNGVAK">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="60532" uncalibrated_precursor_neutral_mass="1754.8751" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60532.60532.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60532" end_scan="60532" index="43627" precursor_neutral_mass="1754.8694" retention_time_sec="2713.5977">
<search_result>
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<spectrum_query start_scan="60536" uncalibrated_precursor_neutral_mass="1614.7582" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.60536.60536.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60536" end_scan="60536" index="43630" precursor_neutral_mass="1614.7561" retention_time_sec="2713.8906">
<search_result>
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</search_score_summary>
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<spectrum_query start_scan="60539" uncalibrated_precursor_neutral_mass="992.51917" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.60539.60539.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60539" end_scan="60539" index="43633" precursor_neutral_mass="992.51794" retention_time_sec="2714.0012">
<search_result>
<search_hit peptide="VLPTYDASK" massdiff="1.220703125E-4" calc_neutral_pep_mass="992.5178" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Filamin-B OS=Homo sapiens OX=9606 GN=FLNB PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="10" protein="sp|O75369|FLNB_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="60545" uncalibrated_precursor_neutral_mass="1906.7913" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60545.60545.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60545" end_scan="60545" index="43639" precursor_neutral_mass="1906.7852" retention_time_sec="2714.2222">
<search_result>
<search_hit peptide="SCSGVEFSTSGSSNTDTGK" massdiff="1.220703125E-4" calc_neutral_pep_mass="1906.785" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Voltage-dependent anion-selective channel protein 2 OS=Homo sapiens OX=9606 GN=VDAC2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="36" hit_rank="1" num_matched_ions="7" protein="sp|P45880|VDAC2_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="SCSGVEFSTSGSSNTDTGK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="60548" uncalibrated_precursor_neutral_mass="1614.7603" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60548.60548.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60548" end_scan="60548" index="43642" precursor_neutral_mass="1614.757" retention_time_sec="2714.3328">
<search_result>
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<spectrum_query start_scan="60551" uncalibrated_precursor_neutral_mass="1026.4634" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60551.60551.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60551" end_scan="60551" index="43645" precursor_neutral_mass="1026.4614" retention_time_sec="2714.4436">
<search_result>
<search_hit peptide="AVCCVGFSK" massdiff="-0.001220703125" calc_neutral_pep_mass="1026.4626" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Echinoderm microtubule-associated protein-like 2 OS=Homo sapiens OX=9606 GN=EML2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|O95834|EMAL2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<mod_aminoacid_mass mass="160.03065" position="4"/>
</modification_info>
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</search_score_summary>
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<spectrum_query start_scan="60553" uncalibrated_precursor_neutral_mass="731.3278" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.60553.60553.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60553" end_scan="60553" index="43647" precursor_neutral_mass="731.32916" retention_time_sec="2714.5173">
<search_result>
<search_hit peptide="PDGCGVK" massdiff="0.001953125" calc_neutral_pep_mass="731.3272" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL16 OS=Homo sapiens OX=9606 GN=RPL10 PE=1 SV=5" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="11" protein="sp|P27635|RL10_HUMAN" peptide_prev_aa="I" is_rejected="0">
<alternative_protein protein_descr="Ribosomal protein uL16-like OS=Homo sapiens OX=9606 GN=RPL10L PE=1 SV=3" protein="sp|Q96L21|RL10L_HUMAN" peptide_prev_aa="I" peptide_next_aa="Y" num_tol_term="0"/>
<modification_info modified_peptide="PDGCGVK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="60554" uncalibrated_precursor_neutral_mass="1650.7495" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60554.60554.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60554" end_scan="60554" index="43648" precursor_neutral_mass="1650.7491" retention_time_sec="2714.5544">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="60555" uncalibrated_precursor_neutral_mass="1599.7219" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60555.60555.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60555" end_scan="60555" index="43649" precursor_neutral_mass="1599.73" retention_time_sec="2714.5913">
<search_result>
<search_hit peptide="VDDSSEDKTEFTVK" massdiff="0.9989013671875" calc_neutral_pep_mass="1598.7311" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Alanine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=AARS1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="7" protein="sp|P49588|SYAC_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="60559" uncalibrated_precursor_neutral_mass="1324.6504" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60559.60559.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60559" end_scan="60559" index="43651" precursor_neutral_mass="1324.6508" retention_time_sec="2714.884">
<search_result>
<search_hit peptide="GNLGAGNGNLQGPR" massdiff="0.9864501953125" calc_neutral_pep_mass="1323.6643" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Matrin-3 OS=Homo sapiens OX=9606 GN=MATR3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="11" protein="sp|P43243|MATR3_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="60561" uncalibrated_precursor_neutral_mass="1784.889" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60561.60561.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60561" end_scan="60561" index="43653" precursor_neutral_mass="1784.8898" retention_time_sec="2714.958">
<search_result>
<search_hit peptide="YSGSEGSTQTLTKGELK" massdiff="0.0106201171875" calc_neutral_pep_mass="1784.8792" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein S100-P OS=Homo sapiens OX=9606 GN=S100P PE=1 SV=2" num_tot_proteins="1" tot_num_ions="32" hit_rank="1" num_matched_ions="12" protein="sp|P25815|S100P_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="60564" uncalibrated_precursor_neutral_mass="1242.5858" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.60564.60564.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60564" end_scan="60564" index="43656" precursor_neutral_mass="1242.5839" retention_time_sec="2715.0684">
<search_result>
<search_hit peptide="HCNMVLENVK" massdiff="-9.765625E-4" calc_neutral_pep_mass="1242.5848" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small nuclear ribonucleoprotein Sm D2 OS=Homo sapiens OX=9606 GN=SNRPD2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="10" protein="sp|P62316|SMD2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="NVPVITGSK" massdiff="-0.00103759765625" calc_neutral_pep_mass="913.52325" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Prohibitin 1 OS=Homo sapiens OX=9606 GN=PHB1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|P35232|PHB1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="YIQDFQR" massdiff="0.00128173828125" calc_neutral_pep_mass="968.47156" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleolar transcription factor 1 OS=Homo sapiens OX=9606 GN=UBTF PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P17480|UBF1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<spectrum_query start_scan="60988" uncalibrated_precursor_neutral_mass="836.43634" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.60988.60988.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60988" end_scan="60988" index="44060" precursor_neutral_mass="836.43866" retention_time_sec="2733.4314">
<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="60992" uncalibrated_precursor_neutral_mass="730.4421" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.60992.60992.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=60992" end_scan="60992" index="44064" precursor_neutral_mass="730.44147" retention_time_sec="2733.5789">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
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<search_result>
<search_hit peptide="SETAPAETATPAPVEK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1597.7834" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.5 OS=Homo sapiens OX=9606 GN=H1-5 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="10" protein="sp|P16401|H15_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<search_result>
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<alternative_protein protein_descr="Keratin, type I cuticular Ha8 OS=Homo sapiens OX=9606 GN=KRT38 PE=1 SV=3" protein="sp|O76015|KRT38_HUMAN" peptide_prev_aa="K" peptide_next_aa="I" num_tol_term="0"/>
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<alternative_protein protein_descr="Keratin, type I microfibrillar 48 kDa, component 8C-1 OS=Ovis aries OX=9940 PE=1 SV=2" protein="sp|P02534|K1M1_SHEEP" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
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<alternative_protein protein_descr="Keratin, type I cuticular Ha3-II OS=Homo sapiens OX=9606 GN=KRT33B PE=1 SV=3" protein="sp|Q14525|KT33B_HUMAN" peptide_prev_aa="K" peptide_next_aa="T" num_tol_term="0"/>
<alternative_protein protein_descr="Keratin, type I cuticular Ha2 OS=Homo sapiens OX=9606 GN=KRT32 PE=1 SV=3" protein="sp|Q14532|K1H2_HUMAN" peptide_prev_aa="K" peptide_next_aa="A" num_tol_term="0"/>
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<alternative_protein protein_descr="Keratin, type I cytoskeletal 24 OS=Homo sapiens OX=9606 GN=KRT24 PE=1 SV=1" protein="sp|Q2M2I5|K1C24_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Keratin, type I cytoskeletal 28 OS=Homo sapiens OX=9606 GN=KRT28 PE=1 SV=2" protein="sp|Q7Z3Y7|K1C28_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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<search_hit peptide="GSFSDTGLGDGK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1139.5094" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Thyroid hormone receptor-associated protein 3 OS=Homo sapiens OX=9606 GN=THRAP3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|Q9Y2W1|TR150_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="FVKQDQVCIAR">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="FVKQDQVCIAR" massdiff="2.44140625E-4" calc_neutral_pep_mass="1362.7078" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens OX=9606 GN=GSPT1 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="20" hit_rank="1" num_matched_ions="11" protein="sp|P15170|ERF3A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<modification_info modified_peptide="FVKQDQVCIAR">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<spectrum_query start_scan="61990" uncalibrated_precursor_neutral_mass="1348.6432" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.61990.61990.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=61990" end_scan="61990" index="45004" precursor_neutral_mass="1348.6394" retention_time_sec="2776.3367">
<search_result>
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<spectrum_query start_scan="61991" uncalibrated_precursor_neutral_mass="1351.5543" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.61991.61991.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=61991" end_scan="61991" index="45005" precursor_neutral_mass="1351.5573" retention_time_sec="2776.3733">
<search_result>
<search_hit peptide="AADISESSGADCK" massdiff="0.0010986328125" calc_neutral_pep_mass="1351.5562" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Density-regulated protein OS=Homo sapiens OX=9606 GN=DENR PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="5" protein="sp|O43583|DENR_HUMAN" peptide_prev_aa="M" is_rejected="0">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="61994" uncalibrated_precursor_neutral_mass="1000.5263" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.61994.61994.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=61994" end_scan="61994" index="45007" precursor_neutral_mass="1000.51935" retention_time_sec="2776.6301">
<search_result>
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<spectrum_query start_scan="61995" uncalibrated_precursor_neutral_mass="844.503" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.61995.61995.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=61995" end_scan="61995" index="45008" precursor_neutral_mass="844.50037" retention_time_sec="2776.6672">
<search_result>
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<analysis_result analysis="peptideprophet">
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</spectrum_query>
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<search_result>
<search_hit peptide="NNVVINYK" massdiff="-6.103515625E-5" calc_neutral_pep_mass="962.5185" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|Q6P2Q9|PRP8_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="DAIQVVR" massdiff="-0.00311279296875" calc_neutral_pep_mass="799.4552" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|Q9UHB9|SRP68_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="KKAVLFCLSEDKK" massdiff="-0.0013427734375" calc_neutral_pep_mass="1564.8646" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cofilin-1 OS=Homo sapiens OX=9606 GN=CFL1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="8" protein="sp|P23528|COF1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="KKAVLFCLSEDKK">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="SDTSSKEIEEAMKR" massdiff="-0.001708984375" calc_neutral_pep_mass="1609.7616" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Serine/arginine-rich splicing factor 11 OS=Homo sapiens OX=9606 GN=SRSF11 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="9" protein="sp|Q05519|SRS11_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="KHEAFLPFSLGK" massdiff="0.003662109375" calc_neutral_pep_mass="1372.7502" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Cytochrome P450 2S1 OS=Homo sapiens OX=9606 GN=CYP2S1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="5" protein="sp|Q96SQ9|CP2S1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="62015" uncalibrated_precursor_neutral_mass="1083.4672" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.62015.62015.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=62015" end_scan="62015" index="45028" precursor_neutral_mass="1083.4644" retention_time_sec="2777.4055">
<search_result>
<search_hit peptide="GYVSDIDCR" massdiff="-0.0010986328125" calc_neutral_pep_mass="1083.4655" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Glutamate--cysteine ligase catalytic subunit OS=Homo sapiens OX=9606 GN=GCLC PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P48506|GSH1_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="GYVSDIDCR">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="STVAQLVK" massdiff="-0.00201416015625" calc_neutral_pep_mass="844.5018" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="ATP synthase subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5F1A PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P25705|ATPA_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="62019" uncalibrated_precursor_neutral_mass="1136.5823" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.62019.62019.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=62019" end_scan="62019" index="45031" precursor_neutral_mass="1136.5818" retention_time_sec="2777.7004">
<search_result>
<search_hit peptide="DPQALSEHLK" massdiff="-7.32421875E-4" calc_neutral_pep_mass="1136.5825" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Stress-induced-phosphoprotein 1 OS=Homo sapiens OX=9606 GN=STIP1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="13" protein="sp|P31948|STIP1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="62021" uncalibrated_precursor_neutral_mass="1422.7327" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.62021.62021.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=62021" end_scan="62021" index="45033" precursor_neutral_mass="1422.7059" retention_time_sec="2777.7742">
<search_result>
<search_hit peptide="SLAPSIHGHDYVK" massdiff="-0.01953125" calc_neutral_pep_mass="1422.7255" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA replication licensing factor MCM3 OS=Homo sapiens OX=9606 GN=MCM3 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="13" protein="sp|P25205|MCM3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="ATAVMPDGQFK" massdiff="-0.001953125" calc_neutral_pep_mass="1179.5593" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Peroxiredoxin-1 OS=Homo sapiens OX=9606 GN=PRDX1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="9" protein="sp|Q06830|PRDX1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="ATAVM[147]PDGQFK">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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</analysis_result>
</search_hit>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="QEYDESGPSIVHR" massdiff="-8.544921875E-4" calc_neutral_pep_mass="1515.6953" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="POTE ankyrin domain family member F OS=Homo sapiens OX=9606 GN=POTEF PE=1 SV=2" num_tot_proteins="7" tot_num_ions="24" hit_rank="1" num_matched_ions="12" protein="sp|A5A3E0|POTEF_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_hit peptide="LLQQEEEIK" massdiff="9.765625E-4" calc_neutral_pep_mass="1128.6025" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=RARS1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|P54136|SYRC_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2" protein="sp|P51991|ROA3_HUMAN" peptide_prev_aa="K" peptide_next_aa="E" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="ACSAIHAVNLR" massdiff="0.0013427734375" calc_neutral_pep_mass="1210.624" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein flightless-1 homolog OS=Homo sapiens OX=9606 GN=FLII PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="11" protein="sp|Q13045|FLII_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="ACSAIHAVNLR">
<mod_aminoacid_mass mass="160.03065" position="2"/>
</modification_info>
<search_score name="hyperscore" value="21.898"/>
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<search_score name="expect" value="1.241072e-03"/>
<analysis_result analysis="peptideprophet">
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<parameter name="massd" value="1.109158"/>
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="62994" uncalibrated_precursor_neutral_mass="810.4263" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.62994.62994.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=62994" end_scan="62994" index="45957" precursor_neutral_mass="810.4251" retention_time_sec="2819.4329">
<search_result>
<search_hit peptide="STTLFSR" massdiff="0.0015869140625" calc_neutral_pep_mass="810.4235" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="ATP-citrate synthase OS=Homo sapiens OX=9606 GN=ACLY PE=1 SV=3" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|P53396|ACLY_HUMAN" peptide_prev_aa="K" is_rejected="0">
<search_score name="hyperscore" value="15.259"/>
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<spectrum_query start_scan="62998" uncalibrated_precursor_neutral_mass="1374.7285" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.62998.62998.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=62998" end_scan="62998" index="45961" precursor_neutral_mass="1374.7262" retention_time_sec="2819.5806">
<search_result>
<search_hit peptide="VIVLSSSHSYQR" massdiff="7.32421875E-4" calc_neutral_pep_mass="1374.7255" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Proteasome assembly chaperone 2 OS=Homo sapiens OX=9606 GN=PSMG2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|Q969U7|PSMG2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<spectrum_query start_scan="63001" uncalibrated_precursor_neutral_mass="787.44507" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.63001.63001.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=63001" end_scan="63001" index="45963" precursor_neutral_mass="787.4449" retention_time_sec="2819.8372">
<search_result>
<search_hit peptide="LDISNVK" massdiff="9.1552734375E-4" calc_neutral_pep_mass="787.444" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="ATP-dependent RNA helicase DDX3X OS=Homo sapiens OX=9606 GN=DDX3X PE=1 SV=3" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="7" protein="sp|O00571|DDX3X_HUMAN" peptide_prev_aa="G" is_rejected="0">
<alternative_protein protein_descr="Large ribosomal subunit protein eL6 OS=Homo sapiens OX=9606 GN=RPL6 PE=1 SV=3" protein="sp|Q02878|RL6_HUMAN" peptide_prev_aa="K" peptide_next_aa="I" num_tol_term="0"/>
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<search_result>
<search_hit peptide="VIVLSSSHSYQR" massdiff="0.001220703125" calc_neutral_pep_mass="1374.7255" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Proteasome assembly chaperone 2 OS=Homo sapiens OX=9606 GN=PSMG2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="11" protein="sp|Q969U7|PSMG2_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="63005" uncalibrated_precursor_neutral_mass="1245.6051" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.63005.63005.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=63005" end_scan="63005" index="45967" precursor_neutral_mass="1245.6013" retention_time_sec="2819.9841">
<search_result>
<search_hit peptide="GPTEADELMKR" massdiff="-9.765625E-4" calc_neutral_pep_mass="1245.6023" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Glucose-6-phosphate 1-dehydrogenase OS=Homo sapiens OX=9606 GN=G6PD PE=1 SV=4" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="9" protein="sp|P11413|G6PD_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="NCSSFLIKR" massdiff="-0.001953125" calc_neutral_pep_mass="1123.5808" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 GN=RPL28 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P46779|RL28_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="ATAGDTHLGGEDFDNR" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1674.7233" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock 70 kDa protein 1A OS=Homo sapiens OX=9606 GN=HSPA1A PE=1 SV=1" num_tot_proteins="5" tot_num_ions="30" hit_rank="1" num_matched_ions="17" protein="sp|P0DMV8|HS71A_HUMAN" peptide_prev_aa="K" is_rejected="0">
<alternative_protein protein_descr="Heat shock 70 kDa protein 1B OS=Homo sapiens OX=9606 GN=HSPA1B PE=1 SV=1" protein="sp|P0DMV9|HS71B_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
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<alternative_protein protein_descr="Heat shock 70 kDa protein 1-like OS=Homo sapiens OX=9606 GN=HSPA1L PE=1 SV=2" protein="sp|P34931|HS71L_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
<alternative_protein protein_descr="Putative heat shock 70 kDa protein 7 OS=Homo sapiens OX=9606 GN=HSPA7 PE=5 SV=2" protein="sp|P48741|HSP77_HUMAN" peptide_prev_aa="K" peptide_next_aa="L" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<modification_info modified_peptide="LGYTPVCR">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="63798" uncalibrated_precursor_neutral_mass="748.4112" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.63798.63798.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=63798" end_scan="63798" index="46720" precursor_neutral_mass="748.412" retention_time_sec="2854.15">
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<search_result>
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</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="63824" uncalibrated_precursor_neutral_mass="968.54266" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.63824.63824.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=63824" end_scan="63824" index="46745" precursor_neutral_mass="968.54034" retention_time_sec="2855.254">
<search_result>
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<search_result>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="GHNQPCLLVGSGR">
<mod_aminoacid_mass mass="160.03065" position="6"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="QYENHIFVGSK" massdiff="0.001220703125" calc_neutral_pep_mass="1320.6461" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein mL65 OS=Homo sapiens OX=9606 GN=MRPS30 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="6" protein="sp|Q9NP92|RT30_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<modification_info modified_peptide="NALANQSDCVLHR">
<mod_aminoacid_mass mass="160.03065" position="9"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="63860" uncalibrated_precursor_neutral_mass="1500.7686" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.63860.63860.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=63860" end_scan="63860" index="46779" precursor_neutral_mass="1500.78" retention_time_sec="2856.934">
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="63885" uncalibrated_precursor_neutral_mass="1130.6072" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.63885.63885.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=63885" end_scan="63885" index="46802" precursor_neutral_mass="1130.6083" retention_time_sec="2858.0034">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="64780" uncalibrated_precursor_neutral_mass="1964.8501" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.64780.64780.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=64780" end_scan="64780" index="47647" precursor_neutral_mass="1964.8492" retention_time_sec="2896.6284">
<search_result>
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<spectrum_query start_scan="64781" uncalibrated_precursor_neutral_mass="1057.5605" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.64781.64781.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=64781" end_scan="64781" index="47648" precursor_neutral_mass="1057.559" retention_time_sec="2896.6653">
<search_result>
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<spectrum_query start_scan="64784" uncalibrated_precursor_neutral_mass="1159.5681" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.64784.64784.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=64784" end_scan="64784" index="47651" precursor_neutral_mass="1159.5627" retention_time_sec="2896.7761">
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<spectrum_query start_scan="64785" uncalibrated_precursor_neutral_mass="1525.7185" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.64785.64785.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=64785" end_scan="64785" index="47652" precursor_neutral_mass="1525.7162" retention_time_sec="2896.8127">
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<spectrum_query start_scan="64787" uncalibrated_precursor_neutral_mass="985.51636" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.64787.64787.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=64787" end_scan="64787" index="47653" precursor_neutral_mass="985.5094" retention_time_sec="2897.0342">
<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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</analysis_result>
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<spectrum_query start_scan="66040" uncalibrated_precursor_neutral_mass="1050.5078" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.66040.66040.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66040" end_scan="66040" index="48844" precursor_neutral_mass="1050.5063" retention_time_sec="2951.094">
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<spectrum_query start_scan="66042" uncalibrated_precursor_neutral_mass="1097.5758" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.66042.66042.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66042" end_scan="66042" index="48846" precursor_neutral_mass="1097.5719" retention_time_sec="2951.1675">
<search_result>
<search_hit peptide="QAAEALDAAKK" massdiff="2.44140625E-4" calc_neutral_pep_mass="1097.5717" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Intestinal-type alkaline phosphatase OS=Homo sapiens OX=9606 GN=ALPI PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="11" protein="sp|P09923|PPBI_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="EGSASTEVLRTEAEQCK" massdiff="0.002685546875" calc_neutral_pep_mass="1893.8738" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=SNRNP200 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="32" hit_rank="1" num_matched_ions="9" protein="sp|O75643|U520_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="EGSASTEVLRTEAEQCK">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="66053" uncalibrated_precursor_neutral_mass="1164.5438" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.66053.66053.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66053" end_scan="66053" index="48856" precursor_neutral_mass="1164.542" retention_time_sec="2951.721">
<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="IELHGKPIEVEHSVPKR" massdiff="0.002685546875" calc_neutral_pep_mass="1967.0951" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens OX=9606 GN=IGF2BP3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="32" hit_rank="1" num_matched_ions="8" protein="sp|O00425|IF2B3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="AVENSSTAIGIR" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1216.6411" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Proteasome subunit alpha type-3 OS=Homo sapiens OX=9606 GN=PSMA3 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="12" protein="sp|P25788|PSA3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="QQHLAFR" massdiff="0.00433349609375" calc_neutral_pep_mass="881.4508" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="9" protein="sp|Q2NL82|TSR1_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="Q[111]QHLAFR">
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<search_result>
<search_hit peptide="KEELVAEQAIK" massdiff="0.0018310546875" calc_neutral_pep_mass="1256.6975" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="eIF5-mimic protein 2 OS=Homo sapiens OX=9606 GN=BZW1 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="20" hit_rank="1" num_matched_ions="11" protein="sp|Q7L1Q6|5MP2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="66063" uncalibrated_precursor_neutral_mass="1002.52856" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.66063.66063.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66063" end_scan="66063" index="48866" precursor_neutral_mass="1002.5245" retention_time_sec="2952.0889">
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<search_result>
<search_hit peptide="KLLEATELK" massdiff="3.662109375E-4" calc_neutral_pep_mass="1043.6226" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens OX=9606 GN=SPTAN1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|Q13813|SPTN1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="66066" uncalibrated_precursor_neutral_mass="770.3619" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.66066.66066.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66066" end_scan="66066" index="48869" precursor_neutral_mass="770.36084" retention_time_sec="2952.1997">
<search_result>
<search_hit peptide="GFGTDFK" massdiff="9.765625E-4" calc_neutral_pep_mass="770.35986" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Beta-hexosaminidase subunit beta OS=Homo sapiens OX=9606 GN=HEXB PE=1 SV=4" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|P07686|HEXB_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="66067" uncalibrated_precursor_neutral_mass="2553.2275" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.66067.66067.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66067" end_scan="66067" index="48870" precursor_neutral_mass="2553.2231" retention_time_sec="2952.2368">
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<search_hit peptide="DGVVEITGKHEERQDEHGYISR" massdiff="0.00244140625" calc_neutral_pep_mass="2553.2207" peptide_next_aa="C" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein beta-1 OS=Homo sapiens OX=9606 GN=HSPB1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="42" hit_rank="1" num_matched_ions="6" protein="sp|P04792|HSPB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<spectrum_query start_scan="66070" uncalibrated_precursor_neutral_mass="941.53217" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.66070.66070.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=66070" end_scan="66070" index="48873" precursor_neutral_mass="941.52924" retention_time_sec="2952.3474">
<search_result>
<search_hit peptide="NIVEAAAVR" massdiff="-1.8310546875E-4" calc_neutral_pep_mass="941.5294" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small ribosomal subunit protein eS26 OS=Homo sapiens OX=9606 GN=RPS26 PE=1 SV=3" num_tot_proteins="2" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P62854|RS26_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Sodium- and chloride-dependent taurine transporter OS=Homo sapiens OX=9606 GN=SLC6A6 PE=1 SV=2" protein="rev_sp|P31641|SC6A6_HUMAN" peptide_prev_aa="I" peptide_next_aa="Y" num_tol_term="0"/>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="DLAACIK" massdiff="-0.00115966796875" calc_neutral_pep_mass="789.40546" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens OX=9606 GN=IDH1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|O75874|IDHC_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="YWPTADGR" massdiff="-0.00177001953125" calc_neutral_pep_mass="964.44025" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Spermine synthase OS=Homo sapiens OX=9606 GN=SMS PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|P52788|SPSY_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="GHVSLAAELSK" massdiff="-0.0048828125" calc_neutral_pep_mass="1110.6033" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="12" protein="sp|P49792|RBP2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<spectrum_query start_scan="67357" uncalibrated_precursor_neutral_mass="1578.7511" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.67357.67357.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67357" end_scan="67357" index="50099" precursor_neutral_mass="1578.7529" retention_time_sec="3007.706">
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<search_hit peptide="SADGSAPAGEGEGVTLQR" massdiff="-1.220703125E-4" calc_neutral_pep_mass="1700.7964" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large neutral amino acids transporter small subunit 1 OS=Homo sapiens OX=9606 GN=SLC7A5 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="34" hit_rank="1" num_matched_ions="13" protein="sp|Q01650|LAT1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67389" uncalibrated_precursor_neutral_mass="1606.9062" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.67389.67389.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67389" end_scan="67389" index="50128" precursor_neutral_mass="1606.9036" retention_time_sec="3009.0327">
<search_result>
<search_hit peptide="QLLTPATGAPKPQGTK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="1606.9042" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens OX=9606 GN=POLR1A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="8" protein="sp|O95602|RPA1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="5.676477e-02"/>
<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67392" uncalibrated_precursor_neutral_mass="1074.5563" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.67392.67392.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67392" end_scan="67392" index="50130" precursor_neutral_mass="1074.5557" retention_time_sec="3009.2886">
<search_result>
<search_hit peptide="SLGPSLATDKS" massdiff="0.0" calc_neutral_pep_mass="1074.5557" peptide_next_aa="-" num_missed_cleavages="0" num_tol_term="0" protein_descr="Thioredoxin-related transmembrane protein 1 OS=Homo sapiens OX=9606 GN=TMX1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="11" protein="sp|Q9H3N1|TMX1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_score name="expect" value="2.835462e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999886" all_ntt_prob="(0.999886,0.999886,0.999886)">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.000000"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67393" uncalibrated_precursor_neutral_mass="897.4721" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.67393.67393.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67393" end_scan="67393" index="50131" precursor_neutral_mass="897.47046" retention_time_sec="3009.4185">
<search_result>
<search_hit peptide="QGYVIYR" massdiff="-3.662109375E-4" calc_neutral_pep_mass="897.4708" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL15 OS=Homo sapiens OX=9606 GN=RPL15 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="8" protein="sp|P61313|RL15_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_score name="expect" value="9.073006e-03"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.998719" all_ntt_prob="(0.998719,0.998719,0.998719)">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67394" uncalibrated_precursor_neutral_mass="963.4703" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.67394.67394.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67394" end_scan="67394" index="50132" precursor_neutral_mass="963.4682" retention_time_sec="3009.455">
<search_result>
<search_hit peptide="GLTDLSACK" massdiff="-0.0013427734375" calc_neutral_pep_mass="963.46954" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nucleolar protein 56 OS=Homo sapiens OX=9606 GN=NOP56 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|O00567|NOP56_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="GLTDLSACK">
<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
<search_score name="hyperscore" value="15.187"/>
<search_score name="nextscore" value="12.051"/>
<search_score name="expect" value="4.523285e-02"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-1.393685"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67396" uncalibrated_precursor_neutral_mass="1080.558" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.67396.67396.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67396" end_scan="67396" index="50134" precursor_neutral_mass="1080.5627" retention_time_sec="3009.5286">
<search_result>
<search_hit peptide="SVHISNAEPK" massdiff="0.0064697265625" calc_neutral_pep_mass="1080.5563" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="TAR DNA-binding protein 43 OS=Homo sapiens OX=9606 GN=TARDBP PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="11" protein="sp|Q13148|TADBP_HUMAN" peptide_prev_aa="I" is_rejected="0">
<search_score name="hyperscore" value="21.372"/>
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<search_score name="expect" value="1.047638e-03"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
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<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67397" uncalibrated_precursor_neutral_mass="1229.601" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.67397.67397.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67397" end_scan="67397" index="50135" precursor_neutral_mass="1229.604" retention_time_sec="3009.5654">
<search_result>
<search_hit peptide="VAEFHTELER" massdiff="0.0" calc_neutral_pep_mass="1229.604" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="26S proteasome non-ATPase regulatory subunit 8 OS=Homo sapiens OX=9606 GN=PSMD8 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="7" protein="sp|P48556|PSMD8_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="12.6"/>
<search_score name="nextscore" value="8.603"/>
<search_score name="expect" value="3.596789e-02"/>
<analysis_result analysis="peptideprophet">
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<search_score_summary>
<parameter name="fval" value="0.830175"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="0.000000"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="67398" uncalibrated_precursor_neutral_mass="1911.8835" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.67398.67398.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67398" end_scan="67398" index="50136" precursor_neutral_mass="1911.8899" retention_time_sec="3009.6023">
<search_result>
<search_hit peptide="GVNTVFHCASPPPSSNNK" massdiff="2.44140625E-4" calc_neutral_pep_mass="1911.8896" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Homo sapiens OX=9606 GN=NSDHL PE=1 SV=2" num_tot_proteins="1" tot_num_ions="34" hit_rank="1" num_matched_ions="7" protein="sp|Q15738|NSDHL_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="GVNTVFHCASPPPSSNNK">
<mod_aminoacid_mass mass="160.03065" position="8"/>
</modification_info>
<search_score name="hyperscore" value="13.589"/>
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<search_score name="expect" value="8.963162e-01"/>
<analysis_result analysis="peptideprophet">
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<parameter name="ntt" value="0"/>
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</search_score_summary>
</peptideprophet_result>
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</spectrum_query>
<spectrum_query start_scan="67402" uncalibrated_precursor_neutral_mass="916.48846" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.67402.67402.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=67402" end_scan="67402" index="50140" precursor_neutral_mass="916.4867" retention_time_sec="3009.7498">
<search_result>
<search_hit peptide="DGVVEITGK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="916.4865" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein beta-1 OS=Homo sapiens OX=9606 GN=HSPB1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="11" protein="sp|P04792|HSPB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="QHRFLDSPR" massdiff="-0.00146484375" calc_neutral_pep_mass="1137.5679" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Zinc finger protein 783 OS=Homo sapiens OX=9606 GN=ZNF783 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="6" protein="rev_sp|Q6ZMS7|ZN783_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
<search_hit peptide="GVSLAALKK" massdiff="-1.220703125E-4" calc_neutral_pep_mass="885.5647" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H1.4 OS=Homo sapiens OX=9606 GN=H1-4 PE=1 SV=2" num_tot_proteins="4" tot_num_ions="16" hit_rank="1" num_matched_ions="9" protein="sp|P10412|H14_HUMAN" peptide_prev_aa="S" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="PLPEPSEQEGESVK" massdiff="0.0" calc_neutral_pep_mass="1524.7306" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="FLYWCH-type zinc finger-containing protein 1 OS=Homo sapiens OX=9606 GN=FLYWCH1 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="26" hit_rank="1" num_matched_ions="5" protein="sp|Q4VC44|FWCH1_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<alternative_protein protein_descr="Histone H2B type 1-D OS=Homo sapiens OX=9606 GN=H2BC5 PE=1 SV=2" protein="sp|P58876|H2B1D_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-C/E/F/G/I OS=Homo sapiens OX=9606 GN=H2BC4 PE=1 SV=4" protein="sp|P62807|H2B1C_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
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<alternative_protein protein_descr="Histone H2B type 1-N OS=Homo sapiens OX=9606 GN=H2BC15 PE=1 SV=3" protein="sp|Q99877|H2B1N_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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</analysis_result>
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<spectrum_query start_scan="68083" uncalibrated_precursor_neutral_mass="1106.5618" assumed_charge="1" spectrum="240825RT_trypsin_37C_16hours_03.68083.68083.1" spectrumNativeID="controllerType=0 controllerNumber=1 scan=68083" end_scan="68083" index="50788" precursor_neutral_mass="1106.5604" retention_time_sec="3039.1865">
<search_result>
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<alternative_protein protein_descr="Histone H1.2 OS=Homo sapiens OX=9606 GN=H1-2 PE=1 SV=2" protein="sp|P16403|H12_HUMAN" peptide_prev_aa="K" peptide_next_aa="N" num_tol_term="0"/>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<search_result>
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<modification_info modified_peptide="TGTLTTNQMSVCR">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="68088" uncalibrated_precursor_neutral_mass="1963.9786" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.68088.68088.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=68088" end_scan="68088" index="50793" precursor_neutral_mass="1963.9818" retention_time_sec="3039.3708">
<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<spectrum_query start_scan="68089" uncalibrated_precursor_neutral_mass="2241.0745" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.68089.68089.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=68089" end_scan="68089" index="50794" precursor_neutral_mass="2241.0745" retention_time_sec="3039.4077">
<search_result>
<search_hit peptide="RGGSGSHNWGTVKDELTESPK" massdiff="-0.0029296875" calc_neutral_pep_mass="2241.0774" peptide_next_aa="Y" num_missed_cleavages="0" num_tol_term="0" protein_descr="SERPINE1 mRNA-binding protein 1 OS=Homo sapiens OX=9606 GN=SERBP1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="40" hit_rank="1" num_matched_ions="9" protein="sp|Q8NC51|SERB1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="68090" uncalibrated_precursor_neutral_mass="907.4657" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.68090.68090.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=68090" end_scan="68090" index="50795" precursor_neutral_mass="907.463" retention_time_sec="3039.4443">
<search_result>
<search_hit peptide="ADLYLEGK" massdiff="-0.00201416015625" calc_neutral_pep_mass="907.465" peptide_next_aa="D" num_missed_cleavages="0" num_tol_term="0" protein_descr="Isoleucine--tRNA ligase, mitochondrial OS=Homo sapiens OX=9606 GN=IARS2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|Q9NSE4|SYIM_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="68091" uncalibrated_precursor_neutral_mass="999.56177" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.68091.68091.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=68091" end_scan="68091" index="50796" precursor_neutral_mass="999.55817" retention_time_sec="3039.481">
<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<search_result>
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</peptideprophet_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="NKEDQYDHLDAADMTK" massdiff="-0.00244140625" calc_neutral_pep_mass="1892.8209" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock 70 kDa protein 4 OS=Homo sapiens OX=9606 GN=HSPA4 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="9" protein="sp|P34932|HSP74_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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</analysis_result>
</search_hit>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="69109" uncalibrated_precursor_neutral_mass="938.45447" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.69109.69109.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=69109" end_scan="69109" index="51765" precursor_neutral_mass="938.4526" retention_time_sec="3083.582">
<search_result>
<search_hit peptide="DCIQYIK" massdiff="-6.103515625E-4" calc_neutral_pep_mass="938.4532" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Structural maintenance of chromosomes protein 1A OS=Homo sapiens OX=9606 GN=SMC1A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="12" hit_rank="1" num_matched_ions="6" protein="sp|Q14683|SMC1A_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="DCIQYIK">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="69110" uncalibrated_precursor_neutral_mass="964.46466" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.69110.69110.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=69110" end_scan="69110" index="51766" precursor_neutral_mass="964.4604" retention_time_sec="3083.6191">
<search_result>
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<spectrum_query start_scan="69111" uncalibrated_precursor_neutral_mass="870.521" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.69111.69111.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=69111" end_scan="69111" index="51767" precursor_neutral_mass="870.5078" retention_time_sec="3083.656">
<search_result>
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<modification_info modified_peptide="n[43]AELIQKK" mod_nterm_mass="43.018425">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="NIPVYECER" massdiff="9.765625E-4" calc_neutral_pep_mass="1178.539" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Interferon-inducible double-stranded RNA-dependent protein kinase activator A OS=Homo sapiens OX=9606 GN=PRKRA PE=1 SV=1" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="7" protein="sp|O75569|PRKRA_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="NIPVYECER">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="69116" uncalibrated_precursor_neutral_mass="822.53296" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.69116.69116.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=69116" end_scan="69116" index="51772" precursor_neutral_mass="822.5329" retention_time_sec="3083.8403">
<search_result>
<search_hit peptide="HVLLTLK" massdiff="1.8310546875E-4" calc_neutral_pep_mass="822.5327" peptide_next_aa="P" num_missed_cleavages="0" num_tol_term="0" protein_descr="Neurofibromin OS=Homo sapiens OX=9606 GN=NF1 PE=1 SV=2" num_tot_proteins="2" tot_num_ions="12" hit_rank="1" num_matched_ions="10" protein="sp|P21359|NF1_HUMAN" peptide_prev_aa="Y" is_rejected="0">
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<search_result>
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<search_result>
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<spectrum_query start_scan="70175" uncalibrated_precursor_neutral_mass="1405.7725" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.70175.70175.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=70175" end_scan="70175" index="52782" precursor_neutral_mass="1405.7699" retention_time_sec="3129.4468">
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<search_result>
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<search_result>
<search_hit peptide="DQAQDGVCLELGGQAAR" massdiff="-0.019775390625" calc_neutral_pep_mass="1786.8268" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="Actin-related protein T3 OS=Homo sapiens OX=9606 GN=ACTRT3 PE=2 SV=1" num_tot_proteins="1" tot_num_ions="32" hit_rank="1" num_matched_ions="9" protein="rev_sp|Q9BYD9|ACTT3_HUMAN" peptide_prev_aa="W" is_rejected="0">
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<search_result>
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<search_result>
<search_hit peptide="TGTSCALDCGAGIGR" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1494.6555" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="N-terminal Xaa-Pro-Lys N-methyltransferase 1 OS=Homo sapiens OX=9606 GN=NTMT1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="16" protein="sp|Q9BV86|NTM1A_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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</search_score_summary>
</peptideprophet_result>
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<spectrum_query start_scan="70203" uncalibrated_precursor_neutral_mass="1619.8531" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.70203.70203.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=70203" end_scan="70203" index="52807" precursor_neutral_mass="1619.8496" retention_time_sec="3130.7585">
<search_result>
<search_hit peptide="LVFHTQLAHGSPTGR" massdiff="-0.0035400390625" calc_neutral_pep_mass="1619.8531" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="PDZ domain-containing protein GIPC1 OS=Homo sapiens OX=9606 GN=GIPC1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="12" protein="sp|O14908|GIPC1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="70204" uncalibrated_precursor_neutral_mass="902.5094" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.70204.70204.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=70204" end_scan="70204" index="52808" precursor_neutral_mass="902.5088" retention_time_sec="3130.7964">
<search_result>
<search_hit peptide="INVELSTK" massdiff="0.00152587890625" calc_neutral_pep_mass="902.50726" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="RNA-binding protein 14 OS=Homo sapiens OX=9606 GN=RBM14 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|Q96PK6|RBM14_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="RTNSTFNQVVLK" massdiff="2.44140625E-4" calc_neutral_pep_mass="1405.7677" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL18 OS=Homo sapiens OX=9606 GN=RPL18 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="9" protein="sp|Q07020|RL18_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="CHTPPLYR" massdiff="0.0" calc_neutral_pep_mass="1025.4752" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL20 OS=Homo sapiens OX=9606 GN=RPL18A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="6" protein="sp|Q02543|RL18A_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="EKLEMEMEAAR" massdiff="8.544921875E-4" calc_neutral_pep_mass="1335.6162" peptide_next_aa="H" num_missed_cleavages="0" num_tol_term="0" protein_descr="Non-POU domain-containing octamer-binding protein OS=Homo sapiens OX=9606 GN=NONO PE=1 SV=4" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="12" protein="sp|Q15233|NONO_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
</search_hit>
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<spectrum_query start_scan="71591" uncalibrated_precursor_neutral_mass="798.48785" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.71591.71591.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=71591" end_scan="71591" index="54127" precursor_neutral_mass="798.4878" retention_time_sec="3190.6433">
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</search_score_summary>
</peptideprophet_result>
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</search_hit>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
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<search_result>
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</search_score_summary>
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<search_result>
<search_hit peptide="ATDAEADVASLNR" massdiff="8.544921875E-4" calc_neutral_pep_mass="1331.6316" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Tropomyosin beta chain OS=Homo sapiens OX=9606 GN=TPM2 PE=1 SV=1" num_tot_proteins="2" tot_num_ions="24" hit_rank="1" num_matched_ions="12" protein="sp|P07951|TPM2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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</search_score_summary>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="EGLELPEDEEEKKKMEESK" massdiff="2.44140625E-4" calc_neutral_pep_mass="2276.0728" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein HSP 90-beta OS=Homo sapiens OX=9606 GN=HSP90AB1 PE=1 SV=4" num_tot_proteins="2" tot_num_ions="36" hit_rank="1" num_matched_ions="12" protein="sp|P08238|HS90B_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="PEDEEEKKKMEESK" massdiff="-2.44140625E-4" calc_neutral_pep_mass="1734.7981" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heat shock protein HSP 90-beta OS=Homo sapiens OX=9606 GN=HSP90AB1 PE=1 SV=4" num_tot_proteins="2" tot_num_ions="26" hit_rank="1" num_matched_ions="9" protein="sp|P08238|HS90B_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="SILTLSHEPK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1123.6237" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens OX=9606 GN=HUWE1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="8" protein="sp|Q7Z6Z7|HUWE1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</analysis_result>
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<search_result>
<search_hit peptide="VCEALEHGHVEWSSR" massdiff="0.015625" calc_neutral_pep_mass="1794.8107" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens OX=9606 GN=OGFOD1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="9" protein="sp|Q8N543|OGFD1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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</analysis_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</analysis_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</analysis_result>
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<spectrum_query start_scan="72000" uncalibrated_precursor_neutral_mass="1572.8193" assumed_charge="4" spectrum="240825RT_trypsin_37C_16hours_03.72000.72000.4" spectrumNativeID="controllerType=0 controllerNumber=1 scan=72000" end_scan="72000" index="54516" precursor_neutral_mass="1572.8197" retention_time_sec="3208.288">
<search_result>
<search_hit peptide="TSHPVVASTWPVHR" massdiff="0.003662109375" calc_neutral_pep_mass="1572.816" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens OX=9606 GN=USP36 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="8" protein="sp|Q9P275|UBP36_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
</analysis_result>
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</search_result>
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<search_result>
<search_hit peptide="AGDRDPLGNDCPEQDRLPQR" massdiff="0.005126953125" calc_neutral_pep_mass="2308.0613" peptide_next_aa="S" num_missed_cleavages="0" num_tol_term="0" protein_descr="UbiA prenyltransferase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=UBIAD1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="38" hit_rank="1" num_matched_ions="14" protein="sp|Q9Y5Z9|UBIA1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="72004" uncalibrated_precursor_neutral_mass="1586.7946" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.72004.72004.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=72004" end_scan="72004" index="54520" precursor_neutral_mass="1586.79" retention_time_sec="3208.435">
<search_result>
<search_hit peptide="TNEKVELQELNDR" massdiff="1.220703125E-4" calc_neutral_pep_mass="1586.7899" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Vimentin OS=Homo sapiens OX=9606 GN=VIM PE=1 SV=4" num_tot_proteins="2" tot_num_ions="24" hit_rank="1" num_matched_ions="11" protein="sp|P08670|VIME_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Desmin OS=Homo sapiens OX=9606 GN=DES PE=1 SV=3" protein="sp|P17661|DESM_HUMAN" peptide_prev_aa="R" peptide_next_aa="F" num_tol_term="0"/>
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<search_result>
<search_hit peptide="GPVLLCLR" massdiff="-0.0035400390625" calc_neutral_pep_mass="926.5372" peptide_next_aa="Q" num_missed_cleavages="0" num_tol_term="0" protein_descr="tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=TRMT61B PE=1 SV=2" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="4" protein="sp|Q9BVS5|TR61B_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="GPVLLCLR">
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</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="72006" uncalibrated_precursor_neutral_mass="1449.7507" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.72006.72006.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=72006" end_scan="72006" index="54522" precursor_neutral_mass="1449.7585" retention_time_sec="3208.5088">
<search_result>
<search_hit peptide="LYEIGAGTSEVRR" massdiff="0.0010986328125" calc_neutral_pep_mass="1449.7574" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=IVD PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="8" protein="sp|P26440|IVD_HUMAN" peptide_prev_aa="K" is_rejected="0">
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</search_score_summary>
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<spectrum_query start_scan="72007" uncalibrated_precursor_neutral_mass="1814.8306" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.72007.72007.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=72007" end_scan="72007" index="54523" precursor_neutral_mass="1814.8235" retention_time_sec="3208.546">
<search_result>
<search_hit peptide="CHEDNVVVAVDSTTNR" massdiff="0.0018310546875" calc_neutral_pep_mass="1814.8217" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Translation initiation factor eIF-2B subunit epsilon OS=Homo sapiens OX=9606 GN=EIF2B5 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="8" protein="sp|Q13144|EI2BE_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="CHEDNVVVAVDSTTNR">
<mod_aminoacid_mass mass="160.03065" position="1"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="72008" uncalibrated_precursor_neutral_mass="1606.7406" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.72008.72008.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=72008" end_scan="72008" index="54524" precursor_neutral_mass="1606.7369" retention_time_sec="3208.5828">
<search_result>
<search_hit peptide="ARPATDSFDDYPPR" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1606.7374" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Eukaryotic translation initiation factor 4B OS=Homo sapiens OX=9606 GN=EIF4B PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="14" protein="sp|P23588|IF4B_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="AEDKEWMPVTK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1332.6383" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small ribosomal subunit protein uS5 OS=Homo sapiens OX=9606 GN=RPS2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="14" protein="sp|P15880|RS2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="LYEIGAGTSEVRR" massdiff="8.544921875E-4" calc_neutral_pep_mass="1449.7574" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=IVD PE=1 SV=2" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="9" protein="sp|P26440|IVD_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="VTCVIDVSGGVNVE" massdiff="-0.0020751953125" calc_neutral_pep_mass="1446.7024" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nephrin OS=Homo sapiens OX=9606 GN=NPHS1 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="7" protein="rev_sp|O60500|NPHN_HUMAN" peptide_prev_aa="D" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="73013" uncalibrated_precursor_neutral_mass="1545.7742" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.73013.73013.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=73013" end_scan="73013" index="55483" precursor_neutral_mass="1545.7737" retention_time_sec="3251.8684">
<search_result>
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<spectrum_query start_scan="73017" uncalibrated_precursor_neutral_mass="920.50714" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.73017.73017.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=73017" end_scan="73017" index="55486" precursor_neutral_mass="920.50525" retention_time_sec="3252.161">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<search_hit peptide="EVVVSVPQR" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1011.5713" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="Nuclear pore membrane glycoprotein 210 OS=Homo sapiens OX=9606 GN=NUP210 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q8TEM1|PO210_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="74088" uncalibrated_precursor_neutral_mass="1979.0745" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.74088.74088.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=74088" end_scan="74088" index="56510" precursor_neutral_mass="1979.0703" retention_time_sec="3298.1763">
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<alternative_protein protein_descr="Heat shock protein HSP 90-alpha A2 OS=Homo sapiens OX=9606 GN=HSP90AA2P PE=1 SV=2" protein="sp|Q14568|HS902_HUMAN" peptide_prev_aa="E" peptide_next_aa="E" num_tol_term="0"/>
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<search_hit peptide="VLHEAEGHIVTCETNTGEVYR" massdiff="-0.00146484375" calc_neutral_pep_mass="2413.133" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small nuclear ribonucleoprotein Sm D3 OS=Homo sapiens OX=9606 GN=SNRPD3 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="40" hit_rank="1" num_matched_ions="18" protein="sp|P62318|SMD3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="AADTQVSETLKR" massdiff="0.0013427734375" calc_neutral_pep_mass="1359.6993" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Stalled ribosome sensor GCN1 OS=Homo sapiens OX=9606 GN=GCN1 PE=1 SV=7" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="15" protein="sp|Q92616|GCN1_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<search_result>
<search_hit peptide="SLAASSSFYGQR" massdiff="-0.0018310546875" calc_neutral_pep_mass="1272.6097" peptide_next_aa="N" num_missed_cleavages="0" num_tol_term="0" protein_descr="Mannosyl-oligosaccharide glucosidase OS=Homo sapiens OX=9606 GN=MOGS PE=1 SV=5" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="12" protein="sp|Q13724|MOGS_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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<search_hit peptide="GKNNTVGLIQLNRPK" massdiff="-0.0018310546875" calc_neutral_pep_mass="1650.9529" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens OX=9606 GN=ECHS1 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="16" protein="sp|P30084|ECHM_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="GAVDGGLSIPHSTK" massdiff="-4.8828125E-4" calc_neutral_pep_mass="1337.6938" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL18 OS=Homo sapiens OX=9606 GN=RPL5 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="14" protein="sp|P46777|RL5_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
<search_hit peptide="VLHEAEGHIVTCETNTGEVYR" massdiff="-0.002685546875" calc_neutral_pep_mass="2413.133" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="Small nuclear ribonucleoprotein Sm D3 OS=Homo sapiens OX=9606 GN=SNRPD3 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="40" hit_rank="1" num_matched_ions="27" protein="sp|P62318|SMD3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<mod_aminoacid_mass mass="160.03065" position="5"/>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="MSVTEGGIKYPETTEGGRPK" massdiff="-0.0029296875" calc_neutral_pep_mass="2136.052" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="38" hit_rank="1" num_matched_ions="8" protein="sp|P24928|RPB1_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="VDGGLSIPHSTK" massdiff="8.544921875E-4" calc_neutral_pep_mass="1209.6353" peptide_next_aa="R" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein uL18 OS=Homo sapiens OX=9606 GN=RPL5 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="14" protein="sp|P46777|RL5_HUMAN" peptide_prev_aa="A" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="VGVSMFNRPH" massdiff="-9.765625E-4" calc_neutral_pep_mass="1142.5654" peptide_next_aa="-" num_missed_cleavages="0" num_tol_term="0" protein_descr="Transmembrane protein 14C OS=Homo sapiens OX=9606 GN=TMEM14C PE=1 SV=1" num_tot_proteins="1" tot_num_ions="18" hit_rank="1" num_matched_ions="8" protein="sp|Q9P0S9|TM14C_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
<search_hit peptide="AADTQVSETLKR" massdiff="0.0013427734375" calc_neutral_pep_mass="1359.6993" peptide_next_aa="F" num_missed_cleavages="0" num_tol_term="0" protein_descr="Stalled ribosome sensor GCN1 OS=Homo sapiens OX=9606 GN=GCN1 PE=1 SV=7" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="14" protein="sp|Q92616|GCN1_HUMAN" peptide_prev_aa="M" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="GLPFGCSK" massdiff="-0.00311279296875" calc_neutral_pep_mass="864.4164" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens OX=9606 GN=HNRNPH3 PE=1 SV=2" num_tot_proteins="3" tot_num_ions="14" hit_rank="1" num_matched_ions="10" protein="sp|P31942|HNRH3_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens OX=9606 GN=HNRNPH1 PE=1 SV=4" protein="sp|P31943|HNRH1_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<alternative_protein protein_descr="Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens OX=9606 GN=HNRNPH2 PE=1 SV=1" protein="sp|P55795|HNRH2_HUMAN" peptide_prev_aa="R" peptide_next_aa="E" num_tol_term="0"/>
<modification_info modified_peptide="GLPFGCSK">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<spectrum_query start_scan="74504" uncalibrated_precursor_neutral_mass="1572.7614" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.74504.74504.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=74504" end_scan="74504" index="56906" precursor_neutral_mass="1572.7573" retention_time_sec="3316.357">
<search_result>
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<spectrum_query start_scan="74506" uncalibrated_precursor_neutral_mass="1624.7716" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.74506.74506.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=74506" end_scan="74506" index="56908" precursor_neutral_mass="1624.7672" retention_time_sec="3316.4304">
<search_result>
<search_hit peptide="QGIETPEDQNDLRK" massdiff="-0.0020751953125" calc_neutral_pep_mass="1624.7693" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="11" protein="sp|Q15637|SF01_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="Q[111]GIETPEDQNDLRK">
<mod_aminoacid_mass mass="111.032074" position="1"/>
</modification_info>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="74509" uncalibrated_precursor_neutral_mass="1213.662" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.74509.74509.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=74509" end_scan="74509" index="56911" precursor_neutral_mass="1213.6652" retention_time_sec="3316.5405">
<search_result>
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<spectrum_query start_scan="74511" uncalibrated_precursor_neutral_mass="1561.8175" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.74511.74511.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=74511" end_scan="74511" index="56913" precursor_neutral_mass="1561.8146" retention_time_sec="3316.6145">
<search_result>
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<search_result>
<search_hit peptide="VGDGGTGK" massdiff="-9.765625E-4" calc_neutral_pep_mass="689.3344" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="GTP-binding nuclear protein Ran OS=Homo sapiens OX=9606 GN=RAN PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="13" protein="sp|P62826|RAN_HUMAN" peptide_prev_aa="L" is_rejected="0">
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<spectrum_query start_scan="74513" uncalibrated_precursor_neutral_mass="876.5058" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.74513.74513.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=74513" end_scan="74513" index="56915" precursor_neutral_mass="876.5077" retention_time_sec="3316.6882">
<search_result>
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<search_result>
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<search_result>
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<search_result>
<search_hit peptide="RPVGASFSFGGK" massdiff="9.765625E-4" calc_neutral_pep_mass="1208.6301" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein transport protein Sec31A OS=Homo sapiens OX=9606 GN=SEC31A PE=1 SV=3" num_tot_proteins="1" tot_num_ions="22" hit_rank="1" num_matched_ions="12" protein="sp|O94979|SC31A_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
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</peptideprophet_result>
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</search_hit>
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<spectrum_query start_scan="75108" uncalibrated_precursor_neutral_mass="1394.5994" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.75108.75108.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=75108" end_scan="75108" index="57484" precursor_neutral_mass="1394.5997" retention_time_sec="3342.3635">
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<spectrum_query start_scan="75109" uncalibrated_precursor_neutral_mass="1272.6224" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.75109.75109.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=75109" end_scan="75109" index="57485" precursor_neutral_mass="1272.6233" retention_time_sec="3342.4004">
<search_result>
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</peptideprophet_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
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<search_result>
<search_hit peptide="AQSQTDRVDLGTLR" massdiff="9.765625E-4" calc_neutral_pep_mass="1558.8063" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="HLA class I histocompatibility antigen, A alpha chain OS=Homo sapiens OX=9606 GN=HLA-A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="14" protein="sp|P04439|HLAA_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_hit peptide="KESYSIYVYK" massdiff="4.8828125E-4" calc_neutral_pep_mass="1278.6495" peptide_next_aa="V" num_missed_cleavages="0" num_tol_term="0" protein_descr="Histone H2B type 1-J OS=Homo sapiens OX=9606 GN=H2BC11 PE=1 SV=3" num_tot_proteins="7" tot_num_ions="18" hit_rank="1" num_matched_ions="16" protein="sp|P06899|H2B1J_HUMAN" peptide_prev_aa="R" is_rejected="0">
<alternative_protein protein_descr="Histone H2B type 1-O OS=Homo sapiens OX=9606 GN=H2BC17 PE=1 SV=3" protein="sp|P23527|H2B1O_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
<alternative_protein protein_descr="Histone H2B type 1-B OS=Homo sapiens OX=9606 GN=H2BC3 PE=1 SV=2" protein="sp|P33778|H2B1B_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
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<alternative_protein protein_descr="Putative histone H2B type 2-C OS=Homo sapiens OX=9606 GN=H2BC20P PE=5 SV=3" protein="sp|Q6DN03|H2B2C_HUMAN" peptide_prev_aa="R" peptide_next_aa="V" num_tol_term="0"/>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="KTCTTVAFTQVNSEDKGALAK" massdiff="-0.001220703125" calc_neutral_pep_mass="2268.1418" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Large ribosomal subunit protein eL8 OS=Homo sapiens OX=9606 GN=RPL7A PE=1 SV=2" num_tot_proteins="1" tot_num_ions="40" hit_rank="1" num_matched_ions="16" protein="sp|P62424|RL7A_HUMAN" peptide_prev_aa="R" is_rejected="0">
<modification_info modified_peptide="KTCTTVAFTQVNSEDKGALAK">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="75129" uncalibrated_precursor_neutral_mass="1761.7772" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.75129.75129.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=75129" end_scan="75129" index="57504" precursor_neutral_mass="1761.7736" retention_time_sec="3343.2842">
<search_result>
<search_hit peptide="FAQHGTFEYEYSQR" massdiff="-9.765625E-4" calc_neutral_pep_mass="1761.7745" peptide_next_aa="W" num_missed_cleavages="0" num_tol_term="0" protein_descr="Splicing factor, proline- and glutamine-rich OS=Homo sapiens OX=9606 GN=SFPQ PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="14" protein="sp|P23246|SFPQ_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="75130" uncalibrated_precursor_neutral_mass="1033.5563" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.75130.75130.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=75130" end_scan="75130" index="57505" precursor_neutral_mass="1033.5557" retention_time_sec="3343.321">
<search_result>
<search_hit peptide="IQEIQTFR" massdiff="1.220703125E-4" calc_neutral_pep_mass="1033.5555" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Adenylyl cyclase-associated protein 2 OS=Homo sapiens OX=9606 GN=CAP2 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="9" protein="sp|P40123|CAP2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="DLSQNFPTK" massdiff="1.011474609375" calc_neutral_pep_mass="1048.5188" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="UDP-glucose:glycoprotein glucosyltransferase 1 OS=Homo sapiens OX=9606 GN=UGGT1 PE=1 SV=3" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="8" protein="sp|Q9NYU2|UGGG1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
<search_hit peptide="AVTKDEDEWKELEQK" massdiff="4.8828125E-4" calc_neutral_pep_mass="1846.8948" peptide_next_aa="E" num_missed_cleavages="0" num_tol_term="0" protein_descr="Protein CDV3 homolog OS=Homo sapiens OX=9606 GN=CDV3 PE=1 SV=1" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="11" protein="sp|Q9UKY7|CDV3_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="75447" uncalibrated_precursor_neutral_mass="778.42163" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.75447.75447.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=75447" end_scan="75447" index="57809" precursor_neutral_mass="778.4213" retention_time_sec="3356.9917">
<search_result>
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<analysis_result analysis="peptideprophet">
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<search_hit peptide="GISEETTTGVHNLYK" massdiff="0.002685546875" calc_neutral_pep_mass="1647.8103" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Adenosylhomocysteinase OS=Homo sapiens OX=9606 GN=AHCY PE=1 SV=4" num_tot_proteins="1" tot_num_ions="28" hit_rank="1" num_matched_ions="16" protein="sp|P23526|SAHH_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<search_result>
<search_hit peptide="SHLLNCCPHDVLSGTR" massdiff="-0.0040283203125" calc_neutral_pep_mass="1864.8672" peptide_next_aa="M" num_missed_cleavages="0" num_tol_term="0" protein_descr="Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens OX=9606 GN=LUC7L2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="16" protein="sp|Q9Y383|LC7L2_HUMAN" peptide_prev_aa="K" is_rejected="0">
<modification_info modified_peptide="SHLLNCCPHDVLSGTR">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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</search_hit>
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<search_result>
<search_hit peptide="ASENAIVWK" massdiff="-0.00250244140625" calc_neutral_pep_mass="1016.52905" peptide_next_aa="I" num_missed_cleavages="0" num_tol_term="0" protein_descr="AP-2 complex subunit mu OS=Homo sapiens OX=9606 GN=AP2M1 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="16" hit_rank="1" num_matched_ions="11" protein="sp|Q96CW1|AP2M1_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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</peptideprophet_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
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<search_result>
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</modification_info>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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</spectrum_query>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
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<spectrum_query start_scan="76812" uncalibrated_precursor_neutral_mass="1005.513" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.76812.76812.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=76812" end_scan="76812" index="59116" precursor_neutral_mass="1005.51355" retention_time_sec="3416.12">
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<search_result>
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<search_result>
<search_hit peptide="TGVELGKPTHFTVNAK" massdiff="2.44140625E-4" calc_neutral_pep_mass="1697.9099" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Filamin-A OS=Homo sapiens OX=9606 GN=FLNA PE=1 SV=4" num_tot_proteins="1" tot_num_ions="30" hit_rank="1" num_matched_ions="19" protein="sp|P21333|FLNA_HUMAN" peptide_prev_aa="R" is_rejected="0">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<alternative_protein protein_descr="Histone H2A type 1-C OS=Homo sapiens OX=9606 GN=H2AC6 PE=1 SV=3" protein="sp|Q93077|H2A1C_HUMAN" peptide_prev_aa="R" peptide_next_aa="L" num_tol_term="0"/>
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<search_result>
<search_hit peptide="ATAVVDGAFKEVK" massdiff="3.662109375E-4" calc_neutral_pep_mass="1333.724" peptide_next_aa="L" num_missed_cleavages="0" num_tol_term="0" protein_descr="Peroxiredoxin-2 OS=Homo sapiens OX=9606 GN=PRDX2 PE=1 SV=5" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="7" protein="sp|P32119|PRDX2_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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</analysis_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="77619" uncalibrated_precursor_neutral_mass="1530.7373" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.77619.77619.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=77619" end_scan="77619" index="59886" precursor_neutral_mass="1530.7391" retention_time_sec="3450.931">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<mod_aminoacid_mass mass="160.03065" position="2"/>
</modification_info>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<modification_info modified_peptide="E[111]IEYEVVR">
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<spectrum_query start_scan="77912" uncalibrated_precursor_neutral_mass="1575.8575" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.77912.77912.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=77912" end_scan="77912" index="60167" precursor_neutral_mass="1575.8549" retention_time_sec="3463.4941">
<search_result>
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<search_result>
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="77930" uncalibrated_precursor_neutral_mass="1302.7389" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.77930.77930.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=77930" end_scan="77930" index="60184" precursor_neutral_mass="1302.7402" retention_time_sec="3464.3042">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="77933" uncalibrated_precursor_neutral_mass="1318.6642" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.77933.77933.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=77933" end_scan="77933" index="60187" precursor_neutral_mass="1318.6637" retention_time_sec="3464.4146">
<search_result>
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<search_result>
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<spectrum_query start_scan="77935" uncalibrated_precursor_neutral_mass="1143.5906" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.77935.77935.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=77935" end_scan="77935" index="60189" precursor_neutral_mass="1143.59" retention_time_sec="3464.489">
<search_result>
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<analysis_result analysis="peptideprophet">
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<spectrum_query start_scan="77961" uncalibrated_precursor_neutral_mass="1458.7974" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.77961.77961.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=77961" end_scan="77961" index="60214" precursor_neutral_mass="1458.7942" retention_time_sec="3465.6025">
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<search_result>
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<search_result>
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<modification_info modified_peptide="EAVCEVALDYKK">
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<analysis_result analysis="peptideprophet">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_hit peptide="GGVVLKEDALPGQK" massdiff="-3.662109375E-4" calc_neutral_pep_mass="1409.7877" peptide_next_aa="T" num_missed_cleavages="0" num_tol_term="0" protein_descr="Basigin OS=Homo sapiens OX=9606 GN=BSG PE=1 SV=2" num_tot_proteins="1" tot_num_ions="26" hit_rank="1" num_matched_ions="16" protein="sp|P35613|BASI_HUMAN" peptide_prev_aa="K" is_rejected="0">
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<search_result>
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<spectrum_query start_scan="78582" uncalibrated_precursor_neutral_mass="973.56696" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.78582.78582.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=78582" end_scan="78582" index="60808" precursor_neutral_mass="973.56506" retention_time_sec="3492.5083">
<search_result>
<search_hit peptide="KLMLDLNK" massdiff="0.00201416015625" calc_neutral_pep_mass="973.56305" peptide_next_aa="A" num_missed_cleavages="0" num_tol_term="0" protein_descr="Trifunctional enzyme subunit beta, mitochondrial OS=Homo sapiens OX=9606 GN=HADHB PE=1 SV=3" num_tot_proteins="1" tot_num_ions="14" hit_rank="1" num_matched_ions="8" protein="sp|P55084|ECHB_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="15.708"/>
<search_score name="nextscore" value="13.821"/>
<search_score name="expect" value="8.143592e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.875350" all_ntt_prob="(0.875350,0.875350,0.875350)">
<search_score_summary>
<parameter name="fval" value="0.054362"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="2.068854"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="78585" uncalibrated_precursor_neutral_mass="1355.6968" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.78585.78585.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=78585" end_scan="78585" index="60811" precursor_neutral_mass="1355.6934" retention_time_sec="3492.6191">
<search_result>
<search_hit peptide="QESRPGEWLVR" massdiff="-0.0010986328125" calc_neutral_pep_mass="1355.6945" peptide_next_aa="K" num_missed_cleavages="0" num_tol_term="0" protein_descr="Oxidoreductase HTATIP2 OS=Homo sapiens OX=9606 GN=HTATIP2 PE=1 SV=2" num_tot_proteins="1" tot_num_ions="20" hit_rank="1" num_matched_ions="8" protein="sp|Q9BUP3|HTAI2_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="16.024"/>
<search_score name="nextscore" value="14.517"/>
<search_score name="expect" value="2.029521e-01"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.970351" all_ntt_prob="(0.970351,0.970351,0.970351)">
<search_score_summary>
<parameter name="fval" value="0.408868"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="-0.810384"/>
<parameter name="isomassd" value="0"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="78586" uncalibrated_precursor_neutral_mass="1383.7501" assumed_charge="2" spectrum="240825RT_trypsin_37C_16hours_03.78586.78586.2" spectrumNativeID="controllerType=0 controllerNumber=1 scan=78586" end_scan="78586" index="60812" precursor_neutral_mass="1383.7568" retention_time_sec="3492.656">
<search_result>
<search_hit peptide="LGLPGDEVDNKVK" massdiff="1.016357421875" calc_neutral_pep_mass="1382.7405" peptide_next_aa="G" num_missed_cleavages="0" num_tol_term="0" protein_descr="DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3" num_tot_proteins="1" tot_num_ions="24" hit_rank="1" num_matched_ions="12" protein="sp|P78527|PRKDC_HUMAN" peptide_prev_aa="R" is_rejected="0">
<search_score name="hyperscore" value="24.227"/>
<search_score name="nextscore" value="14.582"/>
<search_score name="expect" value="2.506273e-04"/>
<analysis_result analysis="peptideprophet">
<peptideprophet_result probability="0.999456" all_ntt_prob="(0.999456,0.999456,0.999456)">
<search_score_summary>
<parameter name="fval" value="1.308700"/>
<parameter name="ntt" value="0"/>
<parameter name="nmc" value="0"/>
<parameter name="massd" value="9.403488"/>
<parameter name="isomassd" value="1"/>
</search_score_summary>
</peptideprophet_result>
</analysis_result>
</search_hit>
</search_result>
</spectrum_query>
<spectrum_query start_scan="78587" uncalibrated_precursor_neutral_mass="1502.8163" assumed_charge="3" spectrum="240825RT_trypsin_37C_16hours_03.78587.78587.3" spectrumNativeID="controllerType=0 controllerNumber=1 scan=78587" end_sca