MetaMorpheus: version 1.0.1
Time to run task: 00:01:06.3468537


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Target inter-crosslinks within 1% FDR: 1
Target intra-crosslinks within 1% FDR: 23
Target single peptides within 1% FDR: 2905
Target loop-linked peptides within 1% FDR: 773
Target deadend peptides within 1% FDR: 498



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Engine Results:

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:01.2127067

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:01.0829266

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:01.0047588

Engine type: FdrAnalysisEngine
Time to run engine: 00:00:02.5619521
crosslinks within 1% FDR: 145
Delta Score Used for FDR Analysis: False

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*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.863109756097561
*       Area Under Curve:  0.8740143369175628
*       Area under Precision recall Curve:  0.9477209979234141
*       F1Score:  0.9123306072458615
*       LogLoss:  1.3093936056076734
*       LogLossReduction:  -0.7022956483978353
*       PositivePrecision:  0.8866596638655462
*       PositiveRecall:  0.9435483870967742
*       NegativePrecision:  0.8333333333333334
*       NegativeRecall:  0.5944444444444444
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:05.0153753
PSMs within 1% FDR: 3869
Delta Score Used for FDR Analysis: False

************************************************************
*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.9970379727537053
*       Area Under Curve:  0.9999248606077905
*       Area under Precision recall Curve:  0.9999349833628384
*       F1Score:  0.9972609028241723
*       LogLoss:  Infinity
*       LogLossReduction:  -Infinity
*       PositivePrecision:  0.9962619997048617
*       PositiveRecall:  0.9982665634302954
*       NegativePrecision:  0.997963759917774
*       NegativeRecall:  0.9955966643563594
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0017343
skippeps within 1% FDR: 2905
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0007681
skippeps within 1% FDR: 773
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0007402
skippeps within 1% FDR: 498
Delta Score Used for FDR Analysis: False



