MetaMorpheus: version 1.0.1
Time to run task: 00:02:43.2145075


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Target inter-crosslinks within 1% FDR: 0
Target intra-crosslinks within 1% FDR: 150
Target single peptides within 1% FDR: 1320
Target loop-linked peptides within 1% FDR: 1368
Target deadend peptides within 1% FDR: 877



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Engine Results:

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:26.8370627

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:25.6808073

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:25.4847702

Engine type: FdrAnalysisEngine
Time to run engine: 00:00:03.1747756
crosslinks within 1% FDR: 432
Delta Score Used for FDR Analysis: False

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*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.8680555555555556
*       Area Under Curve:  0.6089285714285715
*       Area under Precision recall Curve:  0.9277530002789713
*       F1Score:  0.9284798994974875
*       LogLoss:  Infinity
*       LogLossReduction:  -Infinity
*       PositivePrecision:  0.9135847408270239
*       PositiveRecall:  0.9438775510204083
*       NegativePrecision:  0.18452380952380953
*       NegativeRecall:  0.125
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:05.3323358
PSMs within 1% FDR: 3383
Delta Score Used for FDR Analysis: False

************************************************************
*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.9969052011738727
*       Area Under Curve:  0.9996759490728861
*       Area under Precision recall Curve:  0.9997483105106486
*       F1Score:  0.9961658833377125
*       LogLoss:  Infinity
*       LogLossReduction:  -Infinity
*       PositivePrecision:  0.9963350839257602
*       PositiveRecall:  0.9960000000000001
*       NegativePrecision:  0.9972950552411739
*       NegativeRecall:  0.9975174376029905
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0015717
skippeps within 1% FDR: 1320
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0152705
skippeps within 1% FDR: 1368
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0011562
skippeps within 1% FDR: 877
Delta Score Used for FDR Analysis: False



