MetaMorpheus: version 1.0.1
Time to run task: 00:00:37.0826985


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Target inter-crosslinks within 1% FDR: 0
Target intra-crosslinks within 1% FDR: 23
Target single peptides within 1% FDR: 2885
Target loop-linked peptides within 1% FDR: 777
Target deadend peptides within 1% FDR: 498



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Engine Results:

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:00.8653272

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:00.7039790

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:00.8216573

Engine type: FdrAnalysisEngine
Time to run engine: 00:00:01.9927287
crosslinks within 1% FDR: 144
Delta Score Used for FDR Analysis: False

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*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.8570121951219511
*       Area Under Curve:  0.8687186379928316
*       Area under Precision recall Curve:  0.9438850561559724
*       F1Score:  0.9050993809058325
*       LogLoss:  Infinity
*       LogLossReduction:  -Infinity
*       PositivePrecision:  0.9045667538107054
*       PositiveRecall:  0.9096774193548387
*       NegativePrecision:  0.753968253968254
*       NegativeRecall:  0.6805555555555556
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:04.8808263
PSMs within 1% FDR: 3853
Delta Score Used for FDR Analysis: False

************************************************************
*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.996127157597152
*       Area Under Curve:  0.9998905664605574
*       Area under Precision recall Curve:  0.9999233922017984
*       F1Score:  0.9967271185856884
*       LogLoss:  0.02620454261469071
*       LogLossReduction:  0.9731597361923408
*       PositivePrecision:  0.9953730083490245
*       PositiveRecall:  0.9980874316939891
*       NegativePrecision:  0.9972297171251734
*       NegativeRecall:  0.9932990099795648
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0015318
skippeps within 1% FDR: 2885
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0006160
skippeps within 1% FDR: 777
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0006122
skippeps within 1% FDR: 498
Delta Score Used for FDR Analysis: False



