MetaMorpheus: version 1.0.1
Time to run task: 00:02:23.5370683


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Target inter-crosslinks within 1% FDR: 0
Target intra-crosslinks within 1% FDR: 150
Target single peptides within 1% FDR: 1327
Target loop-linked peptides within 1% FDR: 1368
Target deadend peptides within 1% FDR: 938



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Engine Results:

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:21.2088043

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:20.3599491

Engine type: CrosslinkSearchEngine
Time to run engine: 00:00:19.8308173

Engine type: FdrAnalysisEngine
Time to run engine: 00:00:03.8522560
crosslinks within 1% FDR: 432
Delta Score Used for FDR Analysis: False

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*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.8726851851851851
*       Area Under Curve:  0.622704081632653
*       Area under Precision recall Curve:  0.9329866999864574
*       F1Score:  0.9311382630800393
*       LogLoss:  Infinity
*       LogLossReduction:  -Infinity
*       PositivePrecision:  0.9140935399551904
*       PositiveRecall:  0.9489795918367347
*       NegativePrecision:  0.1875
*       NegativeRecall:  0.125
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:05.3015994
PSMs within 1% FDR: 3404
Delta Score Used for FDR Analysis: False

************************************************************
*       Metrics for Determination of PEP Using Binary Classification      
*-----------------------------------------------------------
*       Accuracy:  0.9975747045065655
*       Area Under Curve:  0.999930124502634
*       Area under Precision recall Curve:  0.999901008878524
*       F1Score:  0.9970090777710943
*       LogLoss:  0.027575503943013953
*       LogLossReduction:  0.9716842140619617
*       PositivePrecision:  0.9963523202882218
*       PositiveRecall:  0.9976724296682438
*       NegativePrecision:  0.998415670331158
*       NegativeRecall:  0.997508236758774
*       Count of Ambiguous Peptides Removed:  0
************************************************************



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0015462
skippeps within 1% FDR: 1327
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0018130
skippeps within 1% FDR: 1368
Delta Score Used for FDR Analysis: False



Engine type: FdrAnalysisEngine
Time to run engine: 00:00:00.0010372
skippeps within 1% FDR: 938
Delta Score Used for FDR Analysis: False



