Sequence	K Count	R Count	Modifications	Mass	Mass Fractional Part	Protein Groups	Proteins	Gene Names	Protein Names	Unique (Groups)	Unique (Proteins)	Acetyl (Protein N-term)	Oxidation (M)	Missed cleavages	Fraction Average	Fraction Std. Dev.	Fraction 1	Fraction 2	Fraction 3	Fraction 4	Fraction 5	Retention time	Calibrated retention time	Charges	PEP	MS/MS scan number	Raw file	Score	Delta score	Reverse	Potential contaminant	Ratio H/L	Ratio H/L normalized	Ratio H/L variability [%]	Ratio H/L count	Ratio H/L iso-count	Ratio H/L type	Intensity	Intensity L	Intensity H	id	Protein group IDs	Peptide ID	Evidence IDs	MS/MS IDs	Best MS/MS	Oxidation (M) site IDs	MS/MS Count	Taxonomy IDs
AAELIANSLATAGDGLIELR	0	1	Unmodified	1997.0793	0.079319539	117	P35232	PHB	Prohibitin	yes	yes	0	0	0	4	0				2		22.753	22.753	2;3	1.7727E-251	18653	DP1134_4	256.35	224.36			0.37422	0.38534	19.788	2	0	Median	14581000	9695100	4886200	0	117	0	0;1	0;1;2;3;4	2		5	9606
AAGTLYTYPENWR	0	1	Acetyl (Protein N-term)	1582.7416	0.74160705	106	P26641	EEF1G	Elongation factor 1-gamma	yes	yes	1	0	0	3	0			1			22.145	22.145	2	4.0250999999999996E-22	17611	DP1134_3	219.72	140.23			NaN	NaN	NaN	0	0	Median	0	0	0	1	106	1	2	5	5		1	9606
AAGVEAAAEVAATEIK	1	0	Acetyl (Protein N-term)	1541.7937	0.7937022	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	1	0	0	2	0		1				23.301	23.301	2	1.3598E-259	19784	DP1134_2	260.57	218.23			0.536	0.65419	NaN	1	0	Median	23806000	14817000	8988400	2	142	2	3	6;7;8;9;10;11	8		6	9606
AAGVEAAAEVAATEIKMEEESGAPGVPSGNGAPGPK	2	0	Acetyl (Protein N-term);Oxidation (M)	3406.6198	0.61984352	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	1	1	1	2	0		2				23.41	23.41	3;4	2.4051E-41	19891	DP1134_2	163.31	140.73			NaN	NaN	NaN	0	0	Median	10298000	10298000	0	3	142	3	4;5	12;13;14;15;16;17	13	133	6	9606
AAGVNVEPFWPGLFAK	1	0	Unmodified	1701.8879	0.88787736	59	P05386	RPLP1	60S acidic ribosomal protein P1	yes	yes	0	0	0	5	0					1	23.191	23.191	2	0.0099799	18723	DP1134_5	113.67	56.522			NaN	NaN	NaN	0	0	Median	2259500	2259500	0	4	59	4	6	18;19	18		2	9606
AAIDWFDGK	1	0	Unmodified	1021.4869	0.48689592	119;235	P35637;Q92804	FUS;TAF15	RNA-binding protein FUS;TATA-binding protein-associated factor 2N	no	no	0	0	0	2	0		1				20.511	20.511	2	0.015822	15721	DP1134_2	115.49	27.798			NaN	NaN	NaN	0	0	Median	70170000	0	70170000	5	119;235	5	7	20	20		1	9606
AAIDWFDGKEFHGNIIK	2	0	Unmodified	1959.9843	0.98429694	235	Q92804	TAF15	TATA-binding protein-associated factor 2N	yes	yes	0	0	1	2	0		2				20.424	20.424	3;4	0.00083251	15657	DP1134_2	81.327	60.59			7.5516	7.4504	18.152	2	0	Median	146050000	16223000	129830000	6	235	6	8;9	21;22	21		2	9606
AAIDWFDGKEFSGNPIK	2	0	Unmodified	1893.9261	0.92611336	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	0	1	2	0		2				21.142	21.142	2;3	3.1414E-26	16630	DP1134_2	151.66	133.13			4.3727	4.3138	NaN	1	0	Median	133510000	10844000	122670000	7	119	7	10;11	23;24;25	24		3	9606
AALTDLSFMYR	0	1	Acetyl (Protein N-term);Oxidation (M)	1344.6384	0.63838754	227	Q8NEX9	SDR9C7	Short-chain dehydrogenase/reductase family 9C member 7	yes	yes	1	1	0	4	0				1		23.054	23.054	2	0.013379	19142	DP1134_4	73.985	27.595			NaN	NaN	NaN	0	0	Median	1792900	1792900	0	8	227	8	12	26	26	228	1	9606
AALVLEDGSVLR	0	1	Acetyl (Protein N-term)	1283.7085	0.70851601	108	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	yes	yes	1	0	0	1	0	1					23.501	23.501	2	1.0638E-07	18791	DP1134_1	133.13	39.956			1.2517	1.5461	NaN	1	0	Median	5825100	3122700	2702400	9	108	9	13	27;28;29	29		3	9606
AASDIAMTELPPTHPIR	0	1	Oxidation (M)	1834.9247	0.92473315	157	P62258	YWHAE	14-3-3 protein epsilon	yes	yes	0	1	0	4	0				1		17.193	17.193	3	0.0015736	10100	DP1134_4	75.316	48.952			0.67458	0.69462	NaN	1	0	Median	5766400	3431100	2335300	10	157	10	14	30;31	31	155	2	9606
AATASAGAGGIDGKPR	1	1	Acetyl (Protein N-term)	1440.7321	0.732105	191	Q02978	SLC25A11	Mitochondrial 2-oxoglutarate/malate carrier protein	yes	yes	1	0	1	4	0				1		15.552	15.552	2	6.704E-78	7175	DP1134_4	198.32	152.67			0.44866	0.48209	NaN	1	0	Median	17242000	11868000	5374000	11	191	11	15	32;33;34	33		3	9606
AATGEEVSAEDLGGADLHCR	0	1	Unmodified	2056.912	0.91199621	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			17.424	17.424	3	1.9241E-05	10713	DP1134_3	105.5	69.05			0.56404	0.6895	NaN	1	0	Median	2973899999.9999995	1888299999.9999998	1085600000	12	251	12	16	35;36	36		2	9606
AATGEEVSAEDLGGADLHCRK	1	1	Unmodified	2185.007	0.0069592315	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			1			16.505	16.505	3	7.7897E-26	8817	DP1134_3	148.15	125.17			NaN	NaN	NaN	0	0	Median	117860000	76967000	40891000	13	251	13	17	37	37		1	9606
ADEAYLIGR	0	1	Unmodified	1006.5084	0.50835964	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	1					18.003	18.003	2	1.0188E-17	10446	DP1134_1	157.33	85.987			0.53453	0.66026	NaN	1	0	Median	308150000	192720000	115430000	14	78	14	18	38;39;40	39		3	9606
ADFAQACQDAGVR	0	1	Unmodified	1407.6201	0.62011171	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.5	1.12	1	1	1	1		16.87	16.87	2	3.7157E-104	8613	DP1134_1	214.67	165.88			0.68857	0.77843	9.9436	4	0	Median	1440500000	849390000	591110000	15	78	15	19;20;21;22	41;42;43;44;45;46;47;48;49;50;51;52;53	43		13	9606
ADGQVAELLLR	0	1	Acetyl (Protein N-term)	1225.6667	0.6666512	265	Q9Y285	FARSA	Phenylalanine--tRNA ligase alpha subunit	yes	yes	1	0	0	3	0			1			23.368	23.368	2	8.1911E-11	19534	DP1134_3	148.91	75.681			NaN	NaN	NaN	0	0	Median	2810400	2810400	0	16	265	16	23	54;55	55		2	9606
ADLEMQIESLTEELAYLKK	2	0	Oxidation (M)	2239.1294	0.12936578	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	1	1	2.5	1.12	1	1	1	1		23.88	23.88	3	0.00221	20756	DP1134_2	99.569	61.945		+	NaN	NaN	NaN	0	0	Median	10687000	10687000	0	17	15	17	24;25;26;27	56;57;58;59;60;61;62;63;64;65;66	59	16	11	9606
ADTQTYQPYNK	1	0	Unmodified	1327.6044	0.60444487	183	P84090	ERH	Enhancer of rudimentary homolog	yes	yes	0	0	0	5	0					1	15.145	15.145	2	7.1166000000000005E-162	6223	DP1134_5	239.13	213.23			0.59358	0.69259	NaN	1	0	Median	55022000	34449000	20573000	18	183	18	28	67;68;69	68		3	9606
ADTQTYQPYNKDWIK	2	0	Unmodified	1869.8897	0.88972785	183	P84090	ERH	Enhancer of rudimentary homolog	yes	yes	0	0	1	5	0					1	17.945	17.945	3	0.0018033	10924	DP1134_5	95.854	75.197			0.52339	0.55973	NaN	1	0	Median	35767000	21957000	13811000	19	183	19	29	70;71	70		2	9606
AEAEAQAEELSFPR	0	1	Unmodified	1546.7264	0.72635092	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2	0.707	1	2	1			18.748	18.748	2	0	11749	DP1134_1	313.52	251.76			0.50226	0.6204	NaN	1	0	Median	1979799999.9999998	1377300000	602560000	20	78	20	30;31;32;33	72;73;74;75;76;77;78	73		7	9606
AEAESLYQSK	1	0	Unmodified	1124.535	0.53496832	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	1	0	1					15.547	15.547	2	0.026847	6384	DP1134_1	96.331	59.14		+	NaN	NaN	NaN	0	0	Median	38569000	38569000	0	21	51	21	34	79	79		1	9606
AEAESWYQTK	1	0	Unmodified	1211.5459	0.54586736	9;50	CON__P02538;P02538;CON__P48668;CON__P04259;P48668;CON__Q8VED5;P04259	KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	0	3	0			1			17.049	17.049	2	1.5045E-78	9780	DP1134_3	203.29	143.94		+	NaN	NaN	NaN	0	0	Median	16807000	16807000	0	22	9;50	22	35	80	80		1	9606
AEPYCSVLPGFTFIQHLPLSER	0	1	Unmodified	2560.2784	0.27843005	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	0	0	2	0		1				23.095	23.095	3	1.2133E-05	19485	DP1134_2	130.47	101.58			NaN	NaN	NaN	0	0	Median	12438000	0	12438000	23	248	23	36	81;82;83;84;85	84		5	9606
AEVNTIPGFDGVVKDAEEAVR	1	1	Unmodified	2215.1121	0.11207623	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	1	2	0		1				21.582	21.582	3	0.0013661	17304	DP1134_2	62.19	32.424			0.31078	0.31745	NaN	1	0	Median	6513700	4876600	1637100	24	56	24	37	86	86		1	9606
AEVQVLVLDGR	0	1	Acetyl (Protein N-term)	1239.6823	0.68230126	124	P40429	RPL13A	60S ribosomal protein L13a	yes	yes	1	0	0	4	0				1		22.612	22.612	2	3.9168E-15	18401	DP1134_4	156.48	92.946			0.60075	0.6186	NaN	1	0	Median	20286000	11944000	8342000	25	124	25	38	87;88;89;90	87		4	9606
AFHNEAQVNPER	0	1	Unmodified	1410.664	0.66402543	90	P17987	TCP1	T-complex protein 1 subunit alpha	yes	yes	0	0	0	3.5	0.5			1	1		14.357	14.357	3	0.032871	5570	DP1134_4	40.015	24.629			3.6356	4.079	18.793	2	0	Median	261660000	47910000	213750000	26	90	26	39;40	91;92	92		1	9606
AFITNIPFDVK	1	0	Unmodified	1263.6863	0.68632401	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	0	2	0		1				21.348	21.348	2	6.4365E-39	16950	DP1134_2	176.33	125.52			0.35553	0.43393	NaN	1	0	Median	42023000	29545000	12479000	27	142	27	41	93;94;95	93		3	9606
AFYGDTLVTGFAR	0	1	Unmodified	1416.7038	0.70376498	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			21.001	21.001	2	2.6788E-193	15900	DP1134_3	242.12	213.16			0.61931	0.75706	NaN	1	0	Median	1375400000	845950000	529470000	28	251	28	42	96;97;98;99;100;101	98		6	9606
AFYPEEISSMVLTK	1	0	Oxidation (M)	1629.796	0.79601039	74	P0DMV8;P0DMV9;P34931	HSPA1A;HSPA1B;HSPA1L	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like	yes	no	0	1	0	2	0		1				20.426	20.426	2	0.003944	15667	DP1134_2	95.477	72.101			0.7604	0.92808	NaN	1	0	Median	24009000	13253000	10756000	29	74	29	43	102;103	102	80	2	9606
AFYPEEISSMVLTK	1	0	Unmodified	1613.8011	0.80109577	74	P0DMV8;P0DMV9;P34931	HSPA1A;HSPA1B;HSPA1L	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like	yes	no	0	0	0	2	0		1				21.894	21.894	2	5.3817E-11	17784	DP1134_2	136.5	136.5			0.8347	1.0188	NaN	1	0	Median	22301000	12587000	9714300	30	74	29	44	104;105;106;107;108	107		5	9606
AGELTPEEEAQYKK	2	0	Acetyl (Protein N-term)	1633.7835	0.78353145	257	Q9NZT1	CALML5	Calmodulin-like protein 5	yes	yes	1	0	1	5	0					1	17.139	17.139	2	5.7234E-28	9501	DP1134_5	162.26	119.54			NaN	NaN	NaN	0	0	Median	16817000	16817000	0	31	257	30	45	109	109		1	9606
AGFAGDDAPR	0	1	Unmodified	975.44101	0.44100836	146;175	P60709;Q6S8J3;P63267;P68133;P68032;P62736;A5A3E0;P0CG38;P0CG39;P63261	ACTB;POTEE;ACTG2;ACTA1;ACTC1;ACTA2;POTEF;POTEI;POTEJ;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	0	2	0		1				15.35	15.35	2	0.022953	7434	DP1134_2	99.802	64.507			NaN	NaN	NaN	0	0	Median	0	0	0	32	146;175	31	46	110	110		1	9606
AGLQFPVGR	0	1	Unmodified	943.52395	0.52395013	54;72	Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104;Q8IUE6;Q71UI9;P0C0S5	HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;HIST2H2AB;H2AFV;H2AFZ	Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A type 2-B;Histone H2A.V;Histone H2A.Z	no	no	0	0	0	4.67	0.471				1	2	18.655	18.655	1;2	0.0049606	11855	DP1134_5	127.12	70.015			0.32014	0.33016	47.268	2	0	Median	409940000	285020000	124920000	33	54;72	32	47;48;49	111;112;113;114;115	115		5	9606
AGTHILCIK	1	0	Unmodified	1011.5535	0.55353569	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	2					16.224	16.224	2;3	1.0612E-06	7500	DP1134_1	127.46	127.46			0.66088	0.7986	2.4809	2	0	Median	408810000	238350000	170460000	34	78	33	50;51	116;117;118;119	118		4	9606
AHVEHMQSLPEDPLETSK	1	0	Oxidation (M)	2062.963	0.96296915	198	Q13029	PRDM2	PR domain zinc finger protein 2	yes	yes	0	1	0	5	0					1	17.857	17.857	3	0.030636	10792	DP1134_5	58.688	24.919			NaN	NaN	NaN	0	0	Median	8903000	8903000	0	35	198	34	52	120	120	178	1	9606
AIAIAAGVPVVPGTDAPITSLHEAHEFSNTYGFPIIFK	1	0	Unmodified	3950.0618	0.061825566	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	1					22.987	22.987	4	0.0010166	17997	DP1134_1	53.123	33.228			NaN	NaN	NaN	0	0	Median	14850000	14850000	0	36	78	35	53	121;122	121		2	9606
AIGIGAYLVR	0	1	Unmodified	1031.6128	0.61276513	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					20.377	20.377	2	1.0182E-07	14283	DP1134_1	143	96.634			0.71912	0.88827	NaN	1	0	Median	191580000	111490000	80083000	37	28;199	36	54	123;124	124		2	9606
AIIIFVPVPQLK	1	0	Unmodified	1336.8482	0.84824438	154	P62081	RPS7	40S ribosomal protein S7	yes	yes	0	0	0	4	0				1		22.827	22.827	2	0.0013177	18713	DP1134_4	96.711	96.711			0.36629	0.4255	NaN	1	0	Median	5563600	4054300	1509400	38	154	37	55	125;126;127;128;129	126		5	9606
AIIRHSDLVTK	1	1	Unmodified	1251.7299	0.72992016	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					14.972	14.972	3	0.020383	5603	DP1134_1	75.819	44.533			0.48173	0.58118	NaN	1	0	Median	4702400	2889400	1813000	39	199	38	56	130;131	131		2	9606
AILVDLEPGTMDSVR	0	1	Unmodified	1614.8287	0.8287075	66;201	P07437;Q13509	TUBB;TUBB3	Tubulin beta chain;Tubulin beta-3 chain	no	no	0	0	0	3	0			2			20.824	20.824	2	0.010713	15401	DP1134_3	58.511	36.753			0.54913	0.67128	NaN	1	0	Median	60276000	39129000	21147000	40	66;201	39	57;58	132;133	133		1	9606
AKEFTNVYIK	2	0	Unmodified	1211.655	0.65502388	79	P11940;Q13310	PABPC1;PABPC4	Polyadenylate-binding protein 1;Polyadenylate-binding protein 4	yes	no	0	0	1	2	0		1				16.816	16.816	2	0.014471	9867	DP1134_2	123.86	60.441			NaN	NaN	NaN	0	0	Median	34420000	0	34420000	41	79	40	59	134	134		1	9606
ALAVSDLNR	0	1	Unmodified	957.52434	0.52434406	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.5	1.12	1	1	1	1		16.881	16.881	2	1.6446E-36	8612	DP1134_1	178.6	85.442			0.60852	0.75165	5.2242	3	0	Median	2053199999.9999998	1251600000	801680000	42	78	41	60;61;62;63	135;136;137;138;139;140;141;142;143;144;145	136		11	9606
ALEEANTELEVK	1	0	Unmodified	1344.6773	0.67727546	19	CON__Q04695;Q04695;CON__Q9QWL7	KRT17	Keratin, type I cytoskeletal 17	yes	no	0	0	0	3.5	0.5			1	1		17.253	17.253	2	1.1579E-16	10032	DP1134_3	166.86	89.546		+	NaN	NaN	NaN	0	0	Median	36374000	36374000	0	43	19	42	64;65	146;147	146		2	9606
ALEESNYELEGK	1	0	Unmodified	1380.6409	0.64088996	15	CON__P13645;P13645;CON__P02535-1	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3.25	1.48	1		1	1	1	17.055	17.055	2	1.7195E-32	9833	DP1134_4	198.25	118.77		+	NaN	NaN	NaN	0	0	Median	2323100000	2323100000	0	44	15	43	66;67;68;69	148;149;150;151;152;153	150		6	9606
ALEWLGVIYSGGSTGYNPALK	1	0	Unmodified	2195.1263	0.12626973	3	CON__ENSEMBL:ENSBTAP00000011227			yes	yes	0	0	0	2	1	1		1			23.143	23.143	2	4.6936E-117	19095	DP1134_3	214.47	165.94		+	NaN	NaN	NaN	0	0	Median	7885400	7885400	0	45	3	44	70;71	154;155;156	155		3	
ALIAAQYSGAQVR	0	1	Unmodified	1346.7306	0.73064844	106	P26641	EEF1G	Elongation factor 1-gamma	yes	yes	0	0	0	3	0			1			17.724	17.724	2	1.7329E-16	10662	DP1134_3	151.22	95.754			NaN	NaN	NaN	0	0	Median	5772100	0	5772100	46	106	45	72	157	157		1	9606
ALLLLLVGGVDQSPR	0	1	Unmodified	1549.9192	0.91917749	116	P33993	MCM7	DNA replication licensing factor MCM7	yes	yes	0	0	0	2	0		1				23.418	23.418	2	0.011901	19997	DP1134_2	144.55	85.397			NaN	NaN	NaN	0	0	Median	0	0	0	47	116	46	73	158	158		1	9606
ALNSIIDVYHK	1	0	Unmodified	1271.6874	0.68738664	55	P05109	S100A8	Protein S100-A8;Protein S100-A8, N-terminally processed	yes	yes	0	0	0	4.5	0.5				2	2	18.509	18.509	2;3	1.2144E-08	12260	DP1134_4	166.16	101.95			NaN	NaN	NaN	0	0	Median	237070000	237070000	0	48	55	47	74;75;76;77	159;160;161;162	159		4	9606
ALPNNTSSSPQPK	1	0	Unmodified	1339.6732	0.67319314	52	P04637	TP53	Cellular tumor antigen p53	yes	yes	0	0	0	3	0			1			14.085	14.085	2	1.2126E-10	5084	DP1134_3	140.17	115.65			0.29608	0.36151	NaN	1	0	Median	23166000	17999000	5167500	49	52	48	78	163;164;165	163		3	9606
ALTVPELTQQMFDAK	1	0	Unmodified	1690.86	0.86000763	179;201	P68371;P04350;Q13509	TUBB4B;TUBB4A;TUBB3	Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain	no	no	0	0	0	3	0			1			22.019	22.019	2	0.00018128	17511	DP1134_3	117.27	117.27			0.58895	0.7191	NaN	1	0	Median	12765000	8140000	4624500	50	179;201	49	79	166;167	166		2	9606
ALTVPELTQQVFDAK	1	0	Unmodified	1658.8879	0.88793694	66	P07437	TUBB	Tubulin beta chain	yes	yes	0	0	0	3	0			1			21.836	21.836	2	4.963099999999999E-93	17073	DP1134_3	205.52	161.1			0.53429	0.65236	NaN	1	0	Median	119300000	74599000	44697000	51	66	50	80	168;169;170;171;172	171		5	9606
ALVDGPCTQVR	0	1	Unmodified	1214.6078	0.60775611	139	P50914	RPL14	60S ribosomal protein L14	yes	yes	0	0	0	4	0				1		16.544	16.544	2	1.1018E-20	8839	DP1134_4	163.88	107.62			NaN	NaN	NaN	0	0	Median	11970000	11970000	0	52	139	51	81	173;174	173		2	9606
ALVNQLHER	0	1	Unmodified	1078.5883	0.5883413	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.75	0.829			2	1	1	15.241	15.241	2;3	0.0037996	6780	DP1134_3	112.11	37.064			0.54773	0.68306	16.501	3	0	Plateau	3048699999.9999995	1894399999.9999998	1154300000	53	251	52	82;83;84;85	175;176;177;178;179;180;181;182;183;184	177		10	9606
ALYDAELSQMQTHISDTSVVLSMDNNR	0	1	2 Oxidation (M)	3069.4019	0.4019286	9;50	CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	2	0	3	0			1			19.328	19.328	3	0.018739	13504	DP1134_3	42.03	19.934		+	NaN	NaN	NaN	0	0	Median	21684000	21684000	0	54	9;50	53	86	185	185	3;4	1	9606
ALYDTFSAFGNILSCK	1	0	Unmodified	1805.8658	0.86582129	79	P11940;Q13310	PABPC1;PABPC4	Polyadenylate-binding protein 1;Polyadenylate-binding protein 4	yes	no	0	0	0	2	0		2				23.446	23.446	2	2.3673E-112	20022	DP1134_2	210.93	162.41			NaN	NaN	NaN	0	0	Median	6476200	0	6476200	55	79	54	87;88	186;187	186		2	9606
AMAEHAGPR	0	1	Unmodified	938.43923	0.43923422	226	Q8NDA8	MROH1	Maestro heat-like repeat-containing protein family member 1	yes	yes	0	0	0	1	0	1					17.503	17.503	2	0.01049	9719	DP1134_1	73.975	27.311			0.61569	0.76051	NaN	1	0	Median	53529000	31360000	22169000	56	226	55	89	188	188		0	9606
AMGEQAVALAR	0	1	Oxidation (M)	1131.5706	0.57064232	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	0	2	0		1				15.698	15.698	2	2.2811E-13	8085	DP1134_2	153.05	98.496			NaN	NaN	NaN	0	0	Median	36906000	36906000	0	57	56	56	90	189;190	189	54	2	9606
AMGEQAVALAR	0	1	Unmodified	1115.5757	0.5757277	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				17.144	17.144	2	0.0089478	10309	DP1134_2	113.71	60.152			NaN	NaN	NaN	0	0	Median	92358000	92358000	0	58	56	56	91	191	191		1	9606
AMGIMNSFVNDIFER	0	1	Oxidation (M)	1758.8069	0.8069262	36;62	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J	no	no	0	1	0	4.67	0.471				1	2	22.393	22.393	2	4.3398E-76	17484	DP1134_5	196.48	158.8			0.5276	0.54494	NaN	1	0	Median	40752000	26507000	14245000	59	36;62	57	92;93;94	192;193;194;195;196;197	195	39;40	6	9606
AMGIMNSFVNDIFER	0	1	2 Oxidation (M)	1774.8018	0.80184082	36;62	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J	no	no	0	2	0	5	0					1	21.658	21.658	2	2.2387E-111	16461	DP1134_5	208.74	179.79			0.49477	0.51103	NaN	1	0	Median	141110000	93381000	47734000	60	36;62	57	95	198;199;200;201	198	39;40	4	9606
AMGIMNSFVNDIFER	0	1	Unmodified	1742.812	0.81201158	36;62	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J	no	no	0	0	0	5	0					1	23.975	23.975	2	1.6445E-92	19852	DP1134_5	199.82	159.23			0.51606	0.53301	NaN	1	0	Median	13714000	8667300	5046400	61	36;62	57	96	202;203;204;205;206	202		5	9606
AMTDTFTLQAHDQFSPFSSSSGR	0	1	Oxidation (M)	2533.118	0.11796624	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2.5	0.5		1	1			19.806	19.806	3	2.0524E-09	14022	DP1134_3	136.14	101.92			0.57247	0.66912	NaN	1	0	Median	159630000	101960000	57666000	62	241	58	97;98	207;208;209;210	210	241	4	9606
AMTDTFTLQAHDQFSPFSSSSGR	0	1	Unmodified	2517.1231	0.12305162	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				20.509	20.509	3	6.2809E-95	15662	DP1134_2	197.05	185.2			0.40665	0.4753	NaN	1	0	Median	66117000	43946000	22171000	63	241	58	99	211;212	211		2	9606
ANGTTVHVGIHPSK	1	0	Unmodified	1416.7474	0.74736113	150	Q9UNX3;P61254	RPL26L1;RPL26	60S ribosomal protein L26-like 1;60S ribosomal protein L26	yes	no	0	0	0	4	0				1		14.163	14.163	3	0.00037716	5221	DP1134_4	92.039	62.976			0.50774	0.58981	NaN	1	0	Median	2995900	1939600	1056300	64	150	59	100	213;214;215	213		3	9606
APGIIPR	0	1	Unmodified	722.44391	0.44390889	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			16.211	16.211	2	0.035846	8626	DP1134_3	91.093	18.473			0.34411	0.42065	NaN	1	0	Median	42010000	31147000	10863000	65	104	60	101	216	216		1	9606
APGSLMISGLTEAFVMAQSR	0	1	Oxidation (M)	2081.0285	0.028546297	31	O15037	KHNYN	Protein KHNYN	yes	yes	0	1	0	5	0					1	23.194	23.194	2	0.035544	18870	DP1134_5	54.343	23.604			1.3824	1.4278	NaN	1	0	Median	14807000	5440300	9366400	66	31	61	102	217	217	35	1	9606
APKPDGPGGGPGGSHMGGNYGDDR	1	1	Oxidation (M)	2267.9614	0.96140602	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	1	1	2.8	0.748		2	2	1		13.781	13.781	3;4	3.0125E-09	5507	DP1134_2	107.75	94.475			2.5821	2.8107	14.68	5	0	Median	236610000	59855000	176750000	67	119	62	103;104;105;106;107	218;219;220;221;222;223;224;225;226;227;228;229;230;231;232;233;234;235	219	121	18	9606
APKPDGPGGGPGGSHMGGNYGDDR	1	1	Unmodified	2251.9665	0.9664914	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	0	1	3.2	1.17		2	1	1	1	14.691	14.691	3;4	3.4937E-29	6555	DP1134_2	140.51	131.04			2.981	2.9508	7.7652	4	0	Linear	203100000	48435000	154660000	68	119	62	108;109;110;111;112	236;237;238;239;240;241;242;243;244;245;246	236		11	9606
APSTYGGGLSVSSR	0	1	Unmodified	1337.6575	0.65754307	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	0	3	1.41	1		2		1	16.715	16.715	2	5.0545E-251	8984	DP1134_3	275.48	176.9		+	NaN	NaN	NaN	0	0	Median	16176000	16176000	0	69	14	63	113;114;115;116	247;248;249;250	248		4	9606
AQAVHPGYGFLSENK	1	0	Unmodified	1616.7947	0.79470526	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				17.632	17.632	3	0.0013988	11183	DP1134_2	103.14	71.611			0.32031	0.39094	NaN	1	0	Median	16303000	12403000	3900100	70	56	64	117	251	251		1	9606
AQDTELAAYLENR	0	1	Unmodified	1492.7158	0.71578623	202	Q13574	DGKZ	Diacylglycerol kinase zeta	yes	yes	0	0	0	1	0	1					23.952	23.952	2	0.012783	19331	DP1134_1	65.5	10.1			0.52766	0.65177	NaN	1	0	Median	6967600	4640800	2326800	71	202	65	118	252	252		1	9606
AQFEGIVTDLIR	0	1	Unmodified	1360.7351	0.73506511	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2.5	0.5		1	1			21.967	21.967	2	1.2285E-42	17861	DP1134_2	175.65	134.2			2.548	2.9782	NaN	1	0	Median	49286000	11785000	37501000	72	122	66	119;120	253;254;255;256;257	253		5	9606
AQLGEDIR	0	1	Unmodified	900.46649	0.46649483	233	Q92734	TFG	Protein TFG	yes	yes	0	0	0	3	0			1			15.811	15.811	2	0.0039938	7760	DP1134_3	82.671	27.885			7.5757	9.2608	NaN	1	0	Median	124630000	13445000	111180000	73	233	67	121	258	258		0	9606
AQPSASLGVGYR	0	1	Unmodified	1204.62	0.62003536	238	Q96PK6	RBM14	RNA-binding protein 14	yes	yes	0	0	0	2	0		1				16.854	16.854	2	0.0017108	9909	DP1134_2	103.55	58.793			1.3037	1.5238	NaN	1	0	Median	11545000	2924700	8620000	74	238	68	122	259	259		1	9606
AQYEDIAQK	1	0	Unmodified	1064.5138	0.51383895	51	P04264	KRT1	Keratin, type II cytoskeletal 1	yes	yes	0	0	0	2	0.816	1	1	1			15.371	15.371	2	1.6008E-34	7522	DP1134_2	181.41	74.4		+	NaN	NaN	NaN	0	0	Median	1511699999.9999998	1504899999.9999998	6769600	75	51	69	123;124;125	260;261;262	261		3	9606
AQYEEIANR	0	1	Unmodified	1092.52	0.51998696	16	CON__P13647;P13647	KRT5	Keratin, type II cytoskeletal 5	yes	no	0	0	0	2	1	1		1			15.63	15.63	2	3.5354000000000005E-24	6494	DP1134_1	166.68	70.488		+	NaN	NaN	NaN	0	0	Median	261420000	261420000	0	76	16	70	126;127	263;264	263		2	9606
AQYEEIAQR	0	1	Unmodified	1106.5356	0.53563702	18;9;50	CON__P35908v2;CON__P35908;P35908;Q01546;CON__P19013;P19013;CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT2;KRT76;KRT4;KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	0	3.5	1.12		1	1	1	1	15.687	15.687	2	8.8553E-90	7365	DP1134_3	214.64	155.83		+	NaN	NaN	NaN	0	0	Median	506710000	506710000	0	77	18;9;50	71	128;129;130;131	265;266;267;268;269;270;271	268		7	9606
ASAVSELSPR	0	1	Unmodified	1015.5298	0.52982336	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	0	1	0	2					16.224	16.224	2	1.6312E-95	7472	DP1134_1	209.19	142.03			NaN	NaN	NaN	0	0	Median	27890000	27890000	0	78	266	72	132;133	272;273;274	272		3	9606
ASESSKPWPDATYGTGSASR	1	1	Unmodified	2053.9341	0.93411186	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	1	1	0	1					16.802	16.802	3	3.1634E-78	8551	DP1134_1	186.74	169.76			0.39324	0.47443	NaN	1	0	Median	138770000	99670000	39105000	79	266	73	134	275;276;277;278;279;280;281	279		7	9606
ASGNYATVISHNPETK	1	0	Unmodified	1687.8166	0.81656291	174	P62917	RPL8	60S ribosomal protein L8	yes	yes	0	0	0	4	0				1		15.989	15.989	3	0.00040181	7996	DP1134_4	112.24	93.062			0.53277	0.61888	NaN	1	0	Median	16426000	10576000	5849400	80	174	74	135	282;283	282		2	9606
ASGNYATVISHNPETKK	2	0	Unmodified	1815.9115	0.91152593	174	P62917	RPL8	60S ribosomal protein L8	yes	yes	0	0	1	4	0				1		15.158	15.158	3	0.0012908	6639	DP1134_4	76.82	64.417			0.49232	0.50904	NaN	1	0	Median	9349700	5862800	3486900	81	174	75	136	284;285	284		2	9606
ASLEGNLAETENR	0	1	Unmodified	1402.6688	0.66883604	19	CON__Q04695;Q04695	KRT17	Keratin, type I cytoskeletal 17	yes	no	0	0	0	3	0			1			16.873	16.873	2	1.0646E-105	9472	DP1134_3	217.22	157.29		+	NaN	NaN	NaN	0	0	Median	24156000	24156000	0	82	19	76	137	286;287	286		2	9606
ASLENSLEETKGR	1	1	Unmodified	1432.7158	0.71578623	14;8	CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT14;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16	no	no	0	0	1	2	1	1		1			16.105	16.105	3	1.7859999999999999E-87	7994	DP1134_3	208.33	127.59		+	NaN	NaN	NaN	0	0	Median	160900000	160900000	0	83	8;14	77	138;139	288;289;290	289		3	9606
ASLSLAPVNIFK	1	0	Acetyl (Protein N-term)	1300.7391	0.73908786	181	P78371	CCT2	T-complex protein 1 subunit beta	yes	yes	1	0	0	3	0			1			24.035	24.035	2	0.00014917	20486	DP1134_3	101.65	78.906			0.85047	1.0384	NaN	1	0	Median	9333100	4266700	5066300	84	181	78	140	291;292;293;294	292		4	9606
ASMQQQQQLASAR	0	1	Oxidation (M)	1461.6994	0.69942466	267	Q9Y3Y2	CHTOP	Chromatin target of PRMT1 protein	yes	yes	0	1	0	4	0				1		14.117	14.117	2	0.0028842	5350	DP1134_4	118.77	65.015			NaN	NaN	NaN	0	0	Median	864840	864840	0	85	267	79	141	295	295	287	1	9606
ASMQQQQQLASAR	0	1	Unmodified	1445.7045	0.70451004	267	Q9Y3Y2	CHTOP	Chromatin target of PRMT1 protein	yes	yes	0	0	0	4	0				1		15.065	15.065	2	6.8746E-144	6503	DP1134_4	229	145.05			NaN	NaN	NaN	0	0	Median	28016000	28016000	0	86	267	79	142	296	296		1	9606
ASPSPTDPVVPAVPIGPPPAGFR	0	1	Unmodified	2225.1845	0.18445331	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				20.859	20.859	2	4.7817E-187	14868	DP1134_1	240.42	201.4			0.096008	0.11222	NaN	1	0	Median	392210000	386460000	5755100	87	78	80	143;144	297;298;299;300;301;302	297		6	9606
ASPSPTDPVVPAVPIGPPPAGFRDILLR	0	2	Unmodified	2835.5647	0.56469931	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1	0	1					22.238	22.238	3	1.9667E-07	16890	DP1134_1	90.084	90.084			0.10961	0.10801	NaN	1	0	Median	88336000	77920000	10416000	88	78	81	145	303;304;305	303		3	9606
ATAGDTHLGGEDFDNR	0	1	Unmodified	1674.7234	0.72339081	74;87	P0DMV8;P0DMV9;P34931;P17066;P48741	HSPA1A;HSPA1B;HSPA1L;HSPA6;HSPA7	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7	no	no	0	0	0	2	0		1				16.179	16.179	3	3.6166E-05	8790	DP1134_2	116.87	98.279			0.8607	1.006	NaN	1	0	Median	146750000	74884000	71869000	89	74;87	82	146	306;307;308	306		3	9606
ATCAPQHGAPGPGPADASK	1	0	Unmodified	1788.8213	0.82133071	94	P21333	FLNA	Filamin-A	yes	yes	0	0	0	1	0	1					13.652	13.652	3	2.0475E-05	3876	DP1134_1	151.03	124.82			NaN	NaN	NaN	0	0	Median	0	0	0	90	94	83	147	309	309		1	9606
ATENDIANFFSPLNPIR	0	1	Unmodified	1917.9585	0.95847612	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	0	0	3.5	0.5			3	3		23.267	23.267	2;3	0	19309	DP1134_3	303.51	226.23			4.1381	4.7048	3.4735	3	0	Plateau	146900000	26271000	120630000	91	112	84	148;149;150;151;152;153	310;311;312;313;314;315;316;317;318;319;320;321;322;323	312		14	9606
ATENDIYNFFSPLNPMR	0	1	Oxidation (M)	2043.936	0.93602612	145	P55795	HNRNPH2	Heterogeneous nuclear ribonucleoprotein H2	yes	yes	0	1	0	3	0			2			22.833	22.833	2	0.00084492	18692	DP1134_3	114.56	83.216			NaN	NaN	NaN	0	0	Median	0	0	0	92	145	85	154;155	324;325	325	149	2	9606
ATENDIYNFFSPLNPVR	0	1	Unmodified	1995.969	0.96904081	113;143	P31943;P52597	HNRNPH1;HNRNPF	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed	no	no	0	0	0	3.5	0.5			2	2		23.295	23.295	2;3	0	19374	DP1134_3	318.57	318.57			1.9335	2.3636	20.466	2	0	Median	71845000	25201000	46645000	93	113;143	86	156;157;158;159	326;327;328;329;330;331;332;333;334;335;336	328		11	9606
ATGEADVEFVTHEDAVAAMSK	1	0	Oxidation (M)	2192.9896	0.98957783	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	1	0	4	0				1		18.277	18.277	3	6.7044E-07	11804	DP1134_4	132.01	73.908			NaN	NaN	NaN	0	0	Median	132420000	0	132420000	94	112	87	160	337	337	112	1	9606
ATIAGGGVIPHIHK	1	0	Unmodified	1369.783	0.78301836	72	Q71UI9;P0C0S5	H2AFV;H2AFZ	Histone H2A.V;Histone H2A.Z	yes	no	0	0	0	5	0					1	16.46	16.46	3	7.2437E-05	8301	DP1134_5	91.093	62.66			0.38568	0.45002	NaN	1	0	Median	16044000	11771000	4272800	95	72	88	161	338	338		0	9606
ATLVDHGIR	0	1	Unmodified	980.54033	0.54032847	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					15.105	15.105	2;3	0.0039429	5857	DP1134_1	108.74	30.226			0.53646	0.66263	4.5218	2	0	Median	66909000	41382000	25527000	96	199	89	162;163	339;340;341	340		3	9606
AVETAAAHGSKPNVYANR	1	1	Unmodified	1854.9337	0.93365835	100	P22735	TGM1	Protein-glutamine gamma-glutamyltransferase K	yes	yes	0	0	1	1	0	1					14.124	14.124	3	0.027172	4561	DP1134_1	85.28	58.499			NaN	NaN	NaN	0	0	Median	1478000	1478000	0	97	100	90	164	342	342		1	9606
AVFPSIVGRPR	0	2	Unmodified	1197.6982	0.6982261	146;175	P60709;Q6S8J3;P63267;P68133;P68032;P62736;A5A3E0;P0CG38;P63261	ACTB;POTEE;ACTG2;ACTA1;ACTC1;ACTA2;POTEF;POTEI;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	1	3	0			2			18.025	18.025	2;3	4.0254E-07	11231	DP1134_3	140.45	108.95			NaN	NaN	NaN	0	0	Median	64019000	64019000	0	98	146;175	91	165;166	343;344;345	343		3	9606
AVFVDLEPTVIDEVR	0	1	Unmodified	1700.8985	0.89850163	178;246	P68363;Q9BQE3;Q71U36	TUBA1B;TUBA1C;TUBA1A	Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain	no	no	0	0	0	3	0.816		1	1	1		21.938	21.938	2	2.8699E-258	17330	DP1134_3	260.6	210.41			0.46202	0.51835	4.3488	2	0	Median	108840000	74777000	34067000	99	178;246	92	167;168;169	346;347;348;349	347		4	9606
AVMDDFAAFVEK	1	0	Oxidation (M)	1357.6224	0.62240312	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	1	0	2	0		1				20.329	20.329	2	0.029347	15495	DP1134_2	104.22	54.181		+	NaN	NaN	NaN	0	0	Median	9479000	9479000	0	100	12	93	170	350	350	8	1	9606
AVNYVGAGTVEFIMDSK	1	0	Oxidation (M)	1815.8713	0.8713006	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		1				20.329	20.329	2	1.3773E-185	15470	DP1134_2	234.04	188.68			0.52128	0.63623	NaN	1	0	Median	155570000	100740000	54822000	101	241	94	171	351;352;353	351	242	3	9606
AVNYVGAGTVEFIMDSK	1	0	Unmodified	1799.8764	0.87638598	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		2				21.852	21.852	2;3	1.2577E-44	17681	DP1134_2	165.58	140.22			0.58401	0.71279	6.0333	2	0	Median	174160000	110320000	63839000	102	241	94	172;173	354;355;356;357;358;359;360;361	358		8	9606
AVPKEDIYSGGGGGGSR	1	1	Unmodified	1605.7747	0.7746981	200	Q13151	HNRNPA0	Heterogeneous nuclear ribonucleoprotein A0	yes	yes	0	0	1	4	0				1		15.158	15.158	3	1.2001E-05	6577	DP1134_4	131.61	104.6			NaN	NaN	NaN	0	0	Median	6509700	0	6509700	103	200	95	174	362	362		1	9606
AVVGDAQYHHFR	0	1	Unmodified	1398.6793	0.67928157	134	P47929	LGALS7	Galectin-7	yes	yes	0	0	0	5	0					3	15.219	15.219	2;3;4	2.4374E-11	6352	DP1134_5	144.17	109.67			NaN	NaN	NaN	0	0	Median	186800000	186800000	0	104	134	96	175;176;177	363;364;365;366;367;368	366		6	9606
AVVGVVAGGGR	0	1	Unmodified	940.54541	0.54541385	174	P62917	RPL8	60S ribosomal protein L8	yes	yes	0	0	0	4	0				1		15.652	15.652	2	4.8307E-25	7331	DP1134_4	161.9	90.183			0.60118	0.61904	NaN	1	0	Median	19793000	12203000	7589800	105	174	97	178	369	369		0	9606
AVVIVDDR	0	1	Unmodified	885.49198	0.4919813	209	Q15233;P23246	NONO;SFPQ	Non-POU domain-containing octamer-binding protein;Splicing factor, proline- and glutamine-rich	yes	no	0	0	0	3	0			1			16.205	16.205	2	0.018749	8179	DP1134_3	120.62	67.067			0.74448	0.91007	NaN	1	0	Median	10505000	6123300	4381400	106	209	98	179	370	370		1	9606
AVVMDLLR	0	1	Oxidation (M)	931.51609	0.51608756	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					18.489	18.489	2	0.021868	11421	DP1134_1	102.77	60.299			0.61387	0.75826	NaN	1	0	Median	375620000	227110000	148510000	107	199	99	180	371	371	179	1	9606
AVVVCPKDEDYKQR	2	1	Unmodified	1705.8458	0.84575455	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	2	1	0	1					14.801	14.801	3	0.035799	5380	DP1134_1	24.964	1.8213			1.0239	1.1353	NaN	1	0	Median	2707000	1270300	1436700	108	186	100	181	372	372		0	9606
AYIAYELNSVQHR	0	1	Unmodified	1562.7841	0.78414057	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					18.194	18.194	2;3	9.3261E-44	10837	DP1134_1	178.71	150.51			0.62318	0.76976	9.6923	2	0	Median	433130000	258990000	174150000	109	199	101	182;183	373;374;375	373		2	9606
AYNMVDIIHSVVDER	0	1	Unmodified	1759.8563	0.85631924	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			22.352	22.352	3	0.001498	17957	DP1134_3	79.614	50.802			0.6188	0.75643	NaN	1	0	Median	6484000	3880400	2603600	110	57	102	184	376;377	376		2	9606
AYSEALAAFGNGALFVEK	1	0	Unmodified	1856.9309	0.93086439	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.8	0.748	2	2	1			22.361	22.361	2;3	0	17076	DP1134_1	279.65	279.65			0.57173	0.69781	8.2967	3	0	Median	504710000	310900000	193810000	111	78	103	185;186;187;188;189	378;379;380;381;382;383;384;385;386;387;388;389;390;391;392;393;394;395	378		18	9606
AYVEANQMLGDLIK	1	0	Unmodified	1563.7967	0.79667909	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				21.536	21.536	2	4.0183E-43	15963	DP1134_1	212.72	172.79			0.7284	0.88903	NaN	1	0	Median	24841000	14832000	10009000	112	78	104	190;191	396;397;398;399	396		4	9606
AYVEANQMLGDLIK	1	0	Oxidation (M)	1579.7916	0.79159371	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	3	0			1			19.657	19.657	2	7.9202E-29	13865	DP1134_3	162.26	119.4			0.36858	0.45002	NaN	1	0	Median	17883000	10126000	7757600	113	78	104	192	400	400	84	0	9606
AYVWDNNKDLAEWLEK	2	0	Unmodified	1992.9581	0.95814177	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					21.713	21.713	2;3	7.471999999999999E-290	16221	DP1134_1	282.89	233.81			0.57282	0.62829	2.6598	2	0	Median	141980000	85723000	56255000	114	199	105	193;194	401;402;403;404	403		4	9606
CCTESLVNR	0	1	Unmodified	1137.4907	0.49067744	13;12	CON__P02769;CON__P02768-1;P02768	ALB	Serum albumin	no	no	0	0	0	2	0		1				15.385	15.385	2	1.1277E-16	7489	DP1134_2	191.63	165.69		+	NaN	NaN	NaN	0	0	Median	0	0	0	115	13;12	106	195	405	405		1	9606
CKVHNEGLPAPIVR	1	1	Unmodified	1588.8508	0.85078035	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	0	1	3	0			2			15.995	15.995	3;4	3.812E-06	7882	DP1134_3	140.45	86.431		+	NaN	NaN	NaN	0	0	Median	34804000	34804000	0	116	5;6	107	196;197	406;407	406		2	
CLAAEDVVFIGPDTHAIQAMGDKIESK	2	0	Oxidation (M)	2930.4154	0.41539382	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	1	2	0		1				19.63	19.63	4	0.0001025	14331	DP1134_2	56.131	56.131			0.26998	0.27295	NaN	1	0	Median	15006000	11812000	3193900	117	56	108	198	408	408	55	1	9606
CPPQCSAPCPPPVSSCCGSSSGGCCSSEGGGCCLSHHRPR	0	2	Unmodified	4389.6836	0.68359157	217	Q5TCM9	LCE5A	Late cornified envelope protein 5A	yes	yes	0	0	1	4	0				1		33.758	33.758	7	0.033654	32532	DP1134_4	3.6024	2.3245			NaN	NaN	NaN	0	0	Median	1047700	1047700	0	118	217	109	199	409	409		1	9606
CPQPCPPQQCQQK	1	0	Unmodified	1654.7014	0.70141527	98	P35326;P35325;P22532;P22531	SPRR2A;SPRR2B;SPRR2D;SPRR2E	Small proline-rich protein 2A;Small proline-rich protein 2B;Small proline-rich protein 2D;Small proline-rich protein 2E	yes	no	0	0	0	3	1		1		1		13.822	13.822	2	1.3574E-11	5497	DP1134_2	147.4	120.7			NaN	NaN	NaN	0	0	Median	2160200	2160200	0	119	98	110	200;201	410;411	410		2	9606
DAAAALAAMNGR	0	1	Oxidation (M)	1146.5452	0.54515585	187	Q01085	TIAL1	Nucleolysin TIAR	yes	yes	0	1	0	3	0			1			15.962	15.962	2	0.028464	7906	DP1134_3	51.949	29.989			3.0086	3.6778	NaN	1	0	Median	12044000	2462300	9581700	120	187	111	202	412	412	169	0	9606
DAEAWFNEK	1	0	Unmodified	1108.4825	0.48253882	15	CON__P13645;P13645;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;CON__Q7Z3Y8;Q7Z3Z0;CON__Q7Z3Z0;Q7Z3Y8	KRT10;KRT28;KRT25;KRT27	Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27	yes	no	0	0	0	3	0			1			19.428	19.428	2	2.2174E-45	13629	DP1134_3	186.3	108.19		+	NaN	NaN	NaN	0	0	Median	205740000	205740000	0	121	15	112	203	413;414	413		2	9606
DAEEWFFTK	1	0	Unmodified	1171.5186	0.51858998	8	CON__P02533;P02533;CON__Q6IFX2	KRT14	Keratin, type I cytoskeletal 14	yes	no	0	0	0	3	0			1			21.635	21.635	2	0.014606	16930	DP1134_3	118.33	63.785		+	NaN	NaN	NaN	0	0	Median	8238200	8238200	0	122	8	113	204	415	415		1	9606
DAETWFLSK	1	0	Unmodified	1095.5237	0.52367535	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	0	3	0			1			21.002	21.002	2	1.1622E-06	16015	DP1134_3	143.28	42		+	NaN	NaN	NaN	0	0	Median	21543000	21543000	0	123	14	114	205	416	416		1	9606
DAFLGSFLYEYSR	0	1	Unmodified	1566.7355	0.73545904	13	CON__P02769			yes	yes	0	0	0	3	1.41	1	1	1	1	1	23.618	23.618	2	8.0807E-123	20239	DP1134_2	219.5	192.83		+	NaN	NaN	NaN	0	0	Median	140110000	140110000	0	124	13	115	206;207;208;209;210	417;418;419;420;421;422;423;424	419		8	
DAGVIAGLNVLR	0	1	Unmodified	1196.6877	0.68772099	74	P0DMV8;P0DMV9;P34931	HSPA1A;HSPA1B;HSPA1L	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like	yes	no	0	0	0	2.5	0.5		1	1			21.002	21.002	2	0.017807	16611	DP1134_2	115.71	77.411			NaN	NaN	NaN	0	0	Median	2933600	0	2933600	125	74	116	211;212	425;426	425		2	9606
DAHQSLLATR	0	1	Unmodified	1110.5782	0.57817054	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.33	0.471	2	1				15.644	15.644	2;3	5.8682E-28	6704	DP1134_1	167.93	116.87			0.71975	0.88904	12.035	2	0	Median	762640000	436660000	325980000	126	78	117	213;214;215	427;428;429;430;431;432;433;434	429		8	9606
DALSDLALHFLNK	1	0	Unmodified	1455.7722	0.7721789	140	P50991	CCT4	T-complex protein 1 subunit delta	yes	yes	0	0	0	3	0			2			23.33	23.33	2;3	3.972E-43	19439	DP1134_3	192.12	164.25			1.6248	1.9838	14.411	2	0	Median	15836000	6472100	9363700	127	140	118	216;217	435;436;437;438;439	435		4	9606
DDDIAALVVDNGSGMCK	1	0	Acetyl (Protein N-term);Oxidation (M)	1836.787	0.78697862	146	P60709	ACTB	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed	yes	yes	1	1	0	3	0			1			22.011	22.011	2	2.4019E-08	17421	DP1134_3	136.01	110.78			NaN	NaN	NaN	0	0	Median	8967800	8967800	0	128	146	119	218	440	440	151	1	9606
DDDIAALVVDNGSGMCK	1	0	Acetyl (Protein N-term)	1820.7921	0.792064	146	P60709	ACTB	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed	yes	yes	1	0	0	3	0			1			22.759	22.759	2	4.2113999999999994E-19	18604	DP1134_3	151.7	115.42			NaN	NaN	NaN	0	0	Median	4855700	4855700	0	129	146	119	219	441;442	442		2	9606
DEPIHILNVAIK	1	0	Unmodified	1360.7715	0.77145062	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					19.99	19.99	2;3	3.7509E-43	13564	DP1134_1	180.36	122.11			0.4318	0.52178	NaN	1	0	Median	867210000	596330000	270880000	130	199	120	220;221	443;444;445	444		3	9606
DFFNYLPLSSQDPAPVR	0	1	Unmodified	1964.9632	0.96322715	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			2			22.897	22.897	2;3	3.2017999999999998E-186	18765	DP1134_3	237.87	213.62			0.27051	0.33068	NaN	1	0	Median	35303000	27740000	7562600	131	57	121	222;223	446;447;448;449;450;451;452	447		7	9606
DFTATFGPLDSLNTR	0	1	Unmodified	1653.7999	0.79985021	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.6	1.02	1	1	2	1		22.197	22.197	2	0	16727	DP1134_1	293.88	293.88			0.47315	0.56852	16.546	4	0	Median	340890000	224250000	116640000	132	78	122	224;225;226;227;228	453;454;455;456;457;458;459;460;461;462;463	453		10	9606
DFTVASPAEFVTR	0	1	Unmodified	1438.7092	0.70924429	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	2	0.707	1	2	1			20.972	20.972	2	4.8131E-146	15012	DP1134_1	232.88	160.55			0.5221	0.6449	32.585	3	0	Plateau	351160000	228410000	122760000	133	28;199	123	229;230;231;232	464;465;466;467;468;469;470;471;472;473	465		10	9606
DGMDNQGGYGSVGR	0	1	Oxidation (M)	1427.5736	0.57355545	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	1	0	3.5	0.5			1	1		15.109	15.109	2	2.9222E-110	6560	DP1134_3	209.85	191.24			6.4272	7.2109	5.5136	2	0	Median	142840000	20086000	122760000	134	112	124	233;234	474;475;476;477;478;479;480;481	474	113	8	9606
DIENQYETQITQIEHEVSSSGQEVQSSAK	1	0	Unmodified	3263.5066	0.5065879	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	0	0	2	0.816	1	1	1			22.052	22.052	3	9.8549E-108	17960	DP1134_2	202.44	152.78		+	NaN	NaN	NaN	0	0	Median	45204000	45204000	0	135	17	125	235;236;237	482;483;484;485	483		4	9606
DIIVIGNDITYR	0	1	Unmodified	1390.7456	0.7456298	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					20.87	20.87	2	0.0014079	15004	DP1134_1	98.249	76.785			0.72763	0.89878	NaN	1	0	Median	231820000	103650000	128170000	136	199	126	238;239	486;487;488	486		3	9606
DIPGLTDTTVPR	0	1	Unmodified	1283.6721	0.67213051	166	P62753	RPS6	40S ribosomal protein S6	yes	yes	0	0	0	4	0				1		19.278	19.278	2	0.028924	13314	DP1134_4	94.309	54.461			NaN	NaN	NaN	0	0	Median	6885900	6885900	0	137	166	127	240	489	489		1	9606
DISEASVFDAYVLPK	1	0	Unmodified	1652.8298	0.82975336	171	P62854	RPS26	40S ribosomal protein S26	yes	yes	0	0	0	5	0					1	22.589	22.589	2	2.3668E-37	17832	DP1134_5	166.29	139.54			0.41975	0.48977	NaN	1	0	Median	7689200	5528300	2160900	138	171	128	241	490;491;492	491		3	9606
DKDAYSSFGSR	1	1	Unmodified	1231.5469	0.54692999	27	O00571;O15523	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	yes	no	0	0	1	2	0		1				15.78	15.78	2	0.019824	8097	DP1134_2	119.22	72.142			2.2883	2.3375	NaN	1	0	Median	11766000	3380800	8385000	139	27	129	242	493	493		1	9606
DKFEEDRIYR	1	2	Unmodified	1369.6626	0.66262845	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	2	1	0	1					15.945	15.945	3	0.0076624	6932	DP1134_1	72.643	63.431			0.43173	0.37849	NaN	1	0	Median	622340000	401750000	220590000	140	199	130	243	494	494		0	9606
DKFNECGHVLYADIK	2	0	Unmodified	1807.8563	0.85631924	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	1	2	0		1				17.801	17.801	3	0.0019103	11492	DP1134_2	116.87	72.508			NaN	NaN	NaN	0	0	Median	37247000	37247000	0	141	142	131	244	495	495		1	9606
DKPHVNVGTIGHVDHGK	2	0	Unmodified	1808.9282	0.92817905	138	P49411	TUFM	Elongation factor Tu, mitochondrial	yes	yes	0	0	1	3	0			1			14.528	14.528	4	0.00053075	5628	DP1134_3	106.31	93.512			0.60396	0.66759	NaN	1	0	Median	13199000	8260500	4938700	142	138	132	245	496;497;498;499	496		4	9606
DLEKPFLLPVEAVYSVPGR	1	1	Unmodified	2128.1568	0.15684158	138	P49411	TUFM	Elongation factor Tu, mitochondrial	yes	yes	0	0	1	3	0			1			22.502	22.502	3	1.5447E-05	18179	DP1134_3	116.09	98.794			0.38943	0.45076	NaN	1	0	Median	6920200	4810800	2109400	143	138	133	246	500	500		1	9606
DLKDYFTK	2	0	Unmodified	1028.5179	0.51786169	245	Q99729	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B	yes	yes	0	0	1	3	0			1			18.725	18.725	2	0.022031	12398	DP1134_3	120.87	40.414			NaN	NaN	NaN	0	0	Median	0	0	0	144	245	134	247	501	501		1	9606
DLLHPSPEEEKRK	2	1	Unmodified	1576.8209	0.82092001	127	P42677	RPS27	40S ribosomal protein S27	yes	yes	0	0	2	5	0					1	14.715	14.715	3	3.2548E-45	5590	DP1134_5	182.23	154.03			NaN	NaN	NaN	0	0	Median	17978000	17978000	0	145	127	135	248	502;503	502		2	9606
DLSMIVLLPNEIDGLQK	1	0	Oxidation (M)	1913.018	0.017964835	135;110	P48594;P29508	SERPINB4;SERPINB3	Serpin B4;Serpin B3	no	no	0	1	0	4	0				1		23.206	23.206	2	4.8519E-48	19353	DP1134_4	174.9	135.12			NaN	NaN	NaN	0	0	Median	3889900	3889900	0	146	135;110	136	249	504;505	505	108	2	9606
DLSMIVLLPNEIDGLQK	1	0	Unmodified	1897.0231	0.023050213	135;110	P48594;P29508	SERPINB4;SERPINB3	Serpin B4;Serpin B3	no	no	0	0	0	4	0				1		24.177	24.177	2	4.1599E-12	20776	DP1134_4	142.91	88.439			NaN	NaN	NaN	0	0	Median	1460200	1460200	0	147	135;110	136	250	506;507	507		2	9606
DLSMIVLLPNEIDGLQKLEEK	2	0	Oxidation (M)	2412.2822	0.28217803	135;110	P48594;P29508	SERPINB4;SERPINB3	Serpin B4;Serpin B3	no	no	0	1	1	4	0				1		23.048	23.048	3	0.00231	18953	DP1134_4	106.7	36.368			NaN	NaN	NaN	0	0	Median	4263400	4263400	0	148	135;110	137	251	508;509;510;511	508	108	4	9606
DMAEMQRVWKEK	2	1	Oxidation (M)	1565.733	0.73303298	208	Q15058	KIF14	Kinesin-like protein KIF14	yes	yes	0	1	2	3.5	1.5		1			1	18.579	18.579	2	0.01593	12735	DP1134_2	117.53	38.037			NaN	NaN	NaN	0	0	Median	0	0	0	149	208	138	252;253	512;513	512	216	2	9606
DMAGLLKPTACTMLVSSLR	1	1	2 Oxidation (M)	2095.0476	0.047567179	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	2	1	1	0	1					19.601	19.601	3	0.00014876	12991	DP1134_1	104.45	92.411			0.68353	0.82464	NaN	1	0	Median	43667000	26274000	17393000	150	78	139	254	514;515	514	85;86	2	9606
DMPIQAFLLYQEPVLGPVR	0	1	Oxidation (M)	2201.1555	0.15546137	11	CON__P02666			yes	yes	0	1	0	3	1.41	2	2	2	2	2	23.704	23.704	2;3	0	19972	DP1134_3	297.03	245.89		+	NaN	NaN	NaN	0	0	Median	60948000	60948000	0	151	11	140	255;256;257;258;259;260;261;262;263;264	516;517;518;519;520;521;522;523;524;525;526;527;528;529;530;531;532;533;534;535;536;537;538;539;540;541;542;543;544;545	533	7	30	
DMTLEGDDLILEIE	0	0	Oxidation (M)	1620.744	0.7440344	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1	0	1					24.523	24.523	2	7.319699999999999E-19	20225	DP1134_1	153.24	120.51			NaN	NaN	NaN	0	0	Median	0	0	0	152	78	141	265	546;547	547	87	2	9606
DMTVPILVSKPPVFTGK	2	0	Oxidation (M)	1844.0118	0.011757245	77	P11182	DBT	Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial	yes	yes	0	1	1	3	0			1			19.754	19.754	2	0.028721	13974	DP1134_3	85.536	30.083			NaN	NaN	NaN	0	0	Median	0	0	0	153	77	142	266	548	548	82	1	9606
DNHSPVPIITPTDPIDREIEFLPSR	0	2	Unmodified	2857.461	0.4610221	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	1	1	0	1					21.439	21.439	4	0.011669	15637	DP1134_1	99.923	69.635			NaN	NaN	NaN	0	0	Median	5131600	5131600	0	154	28	143	267	549	549		1	9606
DNIQGITKPAIR	1	1	Unmodified	1324.7463	0.7462985	167	P62805	HIST1H4A	Histone H4	yes	yes	0	0	1	5	0					2	16.46	16.46	2;3	5.7891E-279	8323	DP1134_5	242.97	195.77			0.30828	0.33607	0.055329	2	0	Median	482670000	359030000	123640000	155	167	144	268;269	550;551;552;553;554;555;556;557	555		8	9606
DNTCVVEFQFMLPTSHPNR	0	1	Oxidation (M)	2307.0412	0.041236248	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					20.727	20.727	3	9.6031E-05	14724	DP1134_1	111.01	85.749			0.35582	0.43951	NaN	1	0	Median	25291000	17714000	7576500	156	199	145	270	558	558	180	1	9606
DPSLPLLELQDIMTSVSGR	0	1	Oxidation (M)	2086.0616	0.061620564	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					23.678	23.678	2	2.112E-84	18970	DP1134_1	195.87	176.97			0.38183	0.47165	NaN	1	0	Median	11459000	8258900	3200600	157	199	146	271	559;560;561;562;563;564;565	560	181	7	9606
DPSLPLLELQDIMTSVSGR	0	1	Unmodified	2070.0667	0.066705942	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					26.095	26.095	2	1.1553E-62	22213	DP1134_1	184.11	127.98			NaN	NaN	NaN	0	0	Median	1825200	1825200	0	158	199	146	272	566;567;568	568		3	9606
DSRPSQAAGDNQGDEAKEQTFSGGTSQDTK	2	1	Unmodified	3111.3613	0.36132065	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	2	1	0	2					14.915	14.915	3;4	2.7459E-56	5472	DP1134_1	157.64	145.64			0.37339	0.41401	NaN	1	0	Median	23660000	18775000	4884600	159	266	147	273;274	569;570;571	569		3	9606
DTGKTPVEPEVAIHR	1	1	Unmodified	1647.858	0.8580338	147	P60866	RPS20	40S ribosomal protein S20	yes	yes	0	0	1	5	0					1	15.72	15.72	3	4.0543E-112	7149	DP1134_5	212.03	166.14			NaN	NaN	NaN	0	0	Median	13502000	13502000	0	160	147	148	275	572;573;574	574		3	9606
DTPLFSEAR	0	1	Unmodified	1034.5033	0.50327426	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	1					18.394	18.394	2	0.011671	11076	DP1134_1	124.08	65.484			NaN	NaN	NaN	0	0	Median	10275000	10275000	0	161	28	149	276	575	575		1	9606
DTSYLFITGPDVVK	1	0	Unmodified	1553.7977	0.79772495	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			21.688	21.688	2	0.0010329	17052	DP1134_3	88.155	68.802			0.47596	0.58114	NaN	1	0	Median	86130000	57841000	28289000	162	57	150	277	576	576		1	9606
DTWLVCWAIFSLLK	1	0	Unmodified	1750.9116	0.91164927	0	A0A1B0GX68			yes	yes	0	0	0	1	0	1					21.064	21.064	2	0.012268	15097	DP1134_1	71.451	24.721			0.36441	0.44035	NaN	1	0	Median	85962000	61941000	24021000	163	0	151	278	577	577		1	9606
DVDAAYMNKVELEAK	2	0	Oxidation (M)	1710.8135	0.81345137	16	CON__P13647;P13647	KRT5	Keratin, type II cytoskeletal 5	no	no	0	1	1	3	0			1			17.049	17.049	3	0.0029582	9700	DP1134_3	100.11	15.358		+	NaN	NaN	NaN	0	0	Median	29340000	29340000	0	164	16	152	279	578;579	578	19	2	9606
DVDAAYMNKVELQAK	2	0	Oxidation (M)	1709.8294	0.82943578	9;50;21	CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259;CON__Q14CN4-1;CON__Q6IME9;Q14CN4	KRT6A;KRT6C;KRT6B;KRT72	Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 72	no	no	0	1	1	3	0			2			16.785	16.785	2;3	3.0735E-36	9280	DP1134_3	170.18	64.928		+	NaN	NaN	NaN	0	0	Median	83909000	83909000	0	165	9;50;21	153	280;281	580;581	581	5	2	9606
DVDDGLQAAEEVGYPVMIK	1	0	Oxidation (M)	2063.9721	0.97213685	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					21.064	21.064	2	1.6767E-78	15197	DP1134_1	198.48	166.23			NaN	NaN	NaN	0	0	Median	44044000	44044000	0	166	199	154	282	582	582	182	1	9606
DVDDGLQAAEEVGYPVMIK	1	0	Unmodified	2047.9772	0.97722223	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					22.02	22.02	2	1.2036E-60	16501	DP1134_1	197.19	155.19			NaN	NaN	NaN	0	0	Median	0	0	0	167	199	154	283;284	583;584	583		2	9606
DVDGAYMTK	1	0	Unmodified	998.4379	0.43789681	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2	0.816	1	1	1			16.103	16.103	2	0.018261	7379	DP1134_1	111.95	64.29		+	NaN	NaN	NaN	0	0	Median	247410000	247410000	0	168	51	155	285;286;287	585;586;587;588;589	586		5	9606
DVFLGMFLYEYAR	0	1	Oxidation (M)	1638.7752	0.77521537	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	1	0	2	0		1				24.143	24.143	2	0.025372	21048	DP1134_2	101.93	59.534		+	NaN	NaN	NaN	0	0	Median	2360700	2360700	0	169	12	156	288	590	590	9	1	9606
DVFRDPALKR	1	2	Unmodified	1215.6724	0.67240528	152	P61353	RPL27	60S ribosomal protein L27	yes	yes	0	0	2	5	0					1	16.081	16.081	3	0.010248	7602	DP1134_5	66.595	40.153			0.35156	0.40109	NaN	1	0	Median	7726200	5090400	2635700	170	152	157	289	591	591		0	9606
DYLHYIR	0	1	Unmodified	978.49232	0.49231565	161	P62280	RPS11	40S ribosomal protein S11	yes	yes	0	0	0	4	0				1		18.101	18.101	2	0.0019143	11580	DP1134_4	101.21	64.118			0.81927	0.84361	NaN	1	0	Median	6394300	3029600	3364700	171	161	158	290	592	592		1	9606
DYQELMNTK	1	0	Oxidation (M)	1156.507	0.50703901	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	1	0	3	1.41	1	1	1	1	1	15.74	15.74	2	1.5026E-06	7123	DP1134_5	145.16	90.379		+	NaN	NaN	NaN	0	0	Median	303340000	303340000	0	172	51	159	291;292;293;294;295	593;594;595;596;597;598;599	598	50	7	9606
DYQELMNTK	1	0	Unmodified	1140.5121	0.51212439	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	0	0	2	0		1				18.008	18.008	2	6.3348E-17	11668	DP1134_2	163.15	83.438		+	NaN	NaN	NaN	0	0	Median	29732000	29732000	0	173	51	159	296	600;601	600		2	9606
DYQELMNVK	1	0	Oxidation (M)	1154.5278	0.52777445	18	CON__P35908v2;CON__P35908;P35908;CON__Q5XKE5;Q5XKE5;Q01546;CON__P12035;CON__Q01546;P12035	KRT2;KRT79;KRT76;KRT3	Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 3	yes	no	0	1	0	2	0		1				16.896	16.896	2	1.5026E-06	9928	DP1134_2	145.16	90.544		+	NaN	NaN	NaN	0	0	Median	39204000	39204000	0	174	18	160	297	602;603	602	26	2	9606
EAGGNMSIQFLGTVYK	1	0	Oxidation (M)	1729.8345	0.83452116	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	0	2	0		1				20.245	20.245	2	0.0077751	15283	DP1134_2	108.72	90.092			0.43535	0.53135	NaN	1	0	Median	21834000	14617000	7216700	175	56	161	298	604	604	56	1	9606
EALGGQALYPHVLVK	1	0	Unmodified	1593.8879	0.88787736	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	0	0	2	0		1				19.003	19.003	3	0.0057645	13303	DP1134_2	93.348	62.49			NaN	NaN	NaN	0	0	Median	22456000	0	22456000	176	248	162	299	605;606	605		2	9606
EANNFLWPFK	1	0	Unmodified	1264.6241	0.6240581	91	P18124	RPL7	60S ribosomal protein L7	yes	yes	0	0	0	4	0				1		22.642	22.642	2	0.0089099	18483	DP1134_4	101.72	72.56			0.6524	0.75786	NaN	1	0	Median	3771200	1949700	1821500	177	91	163	300	607;608	608		2	9606
EAPPMEKPEVVK	2	0	Oxidation (M)	1368.6959	0.69590241	169	P62841	RPS15	40S ribosomal protein S15	yes	yes	0	1	1	5	0					1	14.156	14.156	3	0.00018539	5014	DP1134_5	91.313	70.884			NaN	NaN	NaN	0	0	Median	1981500	1585400	396090	178	169	164	301	609;610	610	159	2	9606
EAPVPSLHLK	1	0	Unmodified	1089.6182	0.61824444	249	Q9GZN8	C20orf27	UPF0687 protein C20orf27	yes	yes	0	0	0	3	0			1			17.049	17.049	3	0.029717	9720	DP1134_3	72.243	30.795			NaN	NaN	NaN	0	0	Median	15696000	0	15696000	179	249	165	302	611	611		1	9606
EASFEYLQNEGER	0	1	Unmodified	1570.69	0.68996541	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					18.589	18.589	2	3.0044000000000002E-33	11407	DP1134_1	173.24	139.49			0.56305	0.69548	NaN	1	0	Median	1173100000	728460000	444630000	180	28;199	166	303	612	612		1	9606
EAYPGDVFYLHSR	0	1	Unmodified	1552.731	0.73104237	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			19.217	19.217	3	0.00086161	13227	DP1134_3	101.38	84.168			0.56871	0.6952	NaN	1	0	Median	26457000	16058000	10400000	181	104	167	304	613;614	614		2	9606
ECCQPVLVYIPPQAELR	0	1	Unmodified	2071.0231	0.023066988	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					21.064	21.064	2	0.010889	15181	DP1134_1	131.08	75.362			NaN	NaN	NaN	0	0	Median	75702000	75702000	0	182	199	168	305	615	615		1	9606
EDGNEEDKENQGDETQGQQPPQR	1	1	Unmodified	2627.0968	0.096773109	176	P67809	YBX1	Nuclease-sensitive element-binding protein 1	yes	yes	0	0	1	3	0			1			13.379	13.379	3	8.018500000000001E-25	4092	DP1134_3	145.9	139.18			0.58032	0.67171	NaN	1	0	Median	6136800	3801200	2335600	183	176	169	306	616;617;618;619;620	617		5	9606
EDITQSAQHALR	0	1	Unmodified	1367.6793	0.67934115	196	Q12906	ILF3	Interleukin enhancer-binding factor 3	yes	yes	0	0	0	2	0		1				16.425	16.425	3	0.0028956	9168	DP1134_2	106.62	76.05			NaN	NaN	NaN	0	0	Median	6065800	0	6065800	184	196	170	307	621;622	621		2	9606
EDMWLRMSFSK	1	1	Oxidation (M)	1444.6479	0.64790636	270				yes	no	0	1	1	4	0				1		14.983	14.983	2	0.035175	6448	DP1134_4	47.869	47.869	+		0.46387	0.49843	NaN	1	0	Median	10195000	5576600	4618700	185	270	171	308	623	623	290	0	9606
EDSVKPGAHLTVK	2	0	Unmodified	1379.7409	0.74087877	141	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	yes	yes	0	0	1	3.5	0.5			1	1		14.354	14.354	3	0.0012892	5577	DP1134_4	97.957	47.85			3.6671	3.7524	9.2639	2	0	Median	159150000	30306000	128850000	186	141	172	309;310	624;625;626;627;628	628		5	9606
EEAISNMVVALK	1	0	Oxidation (M)	1318.6803	0.68025235	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	1	0	1	0	1					17.902	17.902	2	0.00044685	10483	DP1134_1	114.4	53.573			0.79241	0.95754	NaN	1	0	Median	168020000	97596000	70423000	187	28;199	173	311	629;630	630	31	2	9606
EEAISNMVVALK	1	0	Unmodified	1302.6853	0.68533773	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					19.996	19.996	2	0.017018	13712	DP1134_1	76.943	50.501			0.91487	1.1055	NaN	1	0	Median	35130000	16366000	18764000	188	28;199	173	312	631	631		1	9606
EEEIAALVIDNGSGMCK	1	0	Acetyl (Protein N-term);Oxidation (M)	1892.8496	0.84957888	175	P63261	ACTG1	Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	yes	yes	1	1	0	3	0			2			23.406	23.406	2	2.4161E-05	19531	DP1134_3	127.78	82.013			NaN	NaN	NaN	0	0	Median	9015400	9015400	0	189	175	174	313;314	632;633;634	632	161	3	9606
EEEIAALVIDNGSGMCK	1	0	Acetyl (Protein N-term)	1876.8547	0.85466426	175	P63261	ACTG1	Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	yes	yes	1	0	0	3	0			1			24.075	24.075	2	1.9281E-49	20544	DP1134_3	179.67	110.02			NaN	NaN	NaN	0	0	Median	2977700	2977700	0	190	175	174	315	635;636	636		2	9606
EEFLIPIYHQVAVQFADLHDTPGR	0	1	Unmodified	2794.4079	0.40786432	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					22.735	22.735	3	8.6143E-22	17656	DP1134_1	170.37	148.24			NaN	NaN	NaN	0	0	Median	8736500	8736500	0	191	199	175	316	637;638	638		2	9606
EEGIGPENLR	0	1	Unmodified	1112.5462	0.54620171	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					17.168	17.168	2	0.0048142	8967	DP1134_1	128.12	99.912			0.46002	0.56822	NaN	1	0	Median	111010000	74839000	36169000	192	199	176	317	639;640;641	640		3	9606
EENKSDMNTVLNYIFSHAQVTK	2	0	Unmodified	2567.2326	0.23260207	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					22.425	22.425	3;4	1.6786E-39	17196	DP1134_1	174.22	139.05			0.48991	0.53735	NaN	1	0	Median	18415000	8568300	9847000	193	199	177	318;319	642;643	643		2	9606
EFSGNPIK	1	0	Unmodified	890.44978	0.44978213	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	0	0	2	0		1				16.079	16.079	2	0.023347	8587	DP1134_2	64.567	35.418			5.5769	6.8067	NaN	1	0	Median	38722000	6184900	32538000	194	119	178	320	644	644		0	9606
EGDLIAAQAR	0	1	Unmodified	1042.5407	0.5407224	48	P02545	LMNA	Prelamin-A/C;Lamin-A/C	yes	yes	0	0	0	2	0		1				16.214	16.214	2	0.014129	8799	DP1134_2	110.41	53.598			NaN	NaN	NaN	0	0	Median	0	0	0	195	48	179	321	645	645		1	9606
EGIAMDQLLSQSLPNDGDEK	1	0	Unmodified	2159.0052	0.005227897	247	Q9BRP1	PDCD2L	Programmed cell death protein 2-like	yes	yes	0	0	0	5	0					1	23.715	23.715	2	0.014647	19492	DP1134_5	104.24	65.239			NaN	NaN	NaN	0	0	Median	3740600	0	3740600	196	247	180	322	646	646		1	9606
EGLPLMVFANWR	0	1	Oxidation (M)	1447.7282	0.7282056	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	2	1	1		1			22.892	22.892	2	0.00013988	17813	DP1134_1	123.21	102.43			0.42167	0.51815	19.091	2	0	Median	131920000	87314000	44606000	197	199	181	323;324	647;648;649;650;651	647	183	5	9606
EGLPLMVFANWR	0	1	Unmodified	1431.7333	0.73329097	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	2	0.816	1	1	1			24.024	24.024	2	0.00083241	20386	DP1134_3	97.431	67.88			0.51195	0.62947	5.0231	3	0	Median	88326000	61867000	26459000	198	199	181	325;326;327	652;653;654;655;656;657;658;659;660;661;662;663;664	664		13	9606
EGSIEIDIPVPK	1	0	Unmodified	1295.6973	0.69728262	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				20.251	20.251	2	2.0002E-10	15277	DP1134_2	141.91	141.91			0.38019	0.46403	NaN	1	0	Median	237150000	169090000	68062000	199	241	182	328	665;666;667;668;669	669		5	9606
EHALLAYTLGVK	1	0	Unmodified	1313.7343	0.73433683	177	P68104;Q5VTE0;Q05639	EEF1A1;EEF1A1P5;EEF1A2	Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2	yes	no	0	0	0	3	0			1			19.328	19.328	2	1.4335E-27	13221	DP1134_3	161.51	161.51			0.64609	0.78886	NaN	1	0	Median	31874000	19220000	12654000	200	177	183	329	670	670		0	9606
EHHFGSSGMTLHER	0	1	Unmodified	1623.7212	0.72122274	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	0	2	0		1				15.193	15.193	4	0.023815	7125	DP1134_2	49.482	33.01			0.7823	0.91437	NaN	1	0	Median	5446800	3426200	2020600	201	266	184	330	671	671		0	9606
EHVIEALRR	0	2	Unmodified	1121.6305	0.63054046	107	P27635	RPL10	60S ribosomal protein L10	yes	yes	0	0	1	4	0				2		15.209	15.209	2;3	0.0049383	6687	DP1134_4	78.516	10.619			0.72151	0.78579	11.371	2	0	Median	7018400	3849100	3169300	202	107	185	331;332	672;673	673		1	9606
EIAENALGK	1	0	Unmodified	943.49746	0.4974606	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	0	0	4	1			1		1	15.708	15.708	2	0.013969	7450	DP1134_3	110.12	22.366			6.8065	8.3106	NaN	1	0	Median	65917000	7610500	58306000	203	112	186	333;334	674;675	674		2	9606
EIAQDFKTDLR	1	1	Unmodified	1334.683	0.68302954	180	Q71DI3;Q16695;P84243;P68431	HIST2H3A;HIST3H3;H3F3A;HIST1H3A	Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1	yes	no	0	0	1	5	0					1	17.356	17.356	2	0.014611	9950	DP1134_5	89.171	58.374			0.49375	0.53825	NaN	1	0	Median	48003000	30193000	17810000	204	180	187	335	676	676		1	9606
EIETYHNLLEGGQEDFESSGAGK	1	0	Unmodified	2509.1245	0.12449141	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	0	0	2	0		1				19.568	19.568	3	5.0683E-42	14204	DP1134_2	183.09	147.39		+	NaN	NaN	NaN	0	0	Median	0	0	0	205	17	188	336	677	677		1	9606
EIFLSQPILLELEAPLK	1	0	Unmodified	1952.1234	0.12341618	121	P36873;P62136;P62140	PPP1CC;PPP1CA;PPP1CB	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit	yes	no	0	0	0	3	0			1			24.539	24.539	2	2.8605E-18	21226	DP1134_3	150.49	87.412			NaN	NaN	NaN	0	0	Median	3958500	0	3958500	206	121	189	337	678	678		1	9606
EIGYPVMIK	1	0	Oxidation (M)	1064.5576	0.55761802	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	0	2	0		1				18.311	18.311	2	0.0075126	12341	DP1134_2	75.189	46.04			0.49518	0.60438	NaN	1	0	Median	57836000	39052000	18783000	207	56	190	338	679	679	57	0	9606
EIIDLVLDR	0	1	Unmodified	1084.6128	0.61282471	178;246	P68363;Q9BQE3;Q71U36	TUBA1B;TUBA1C;TUBA1A	Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain	no	no	0	0	0	3	0			1			21.524	21.524	2	6.6787E-18	16705	DP1134_3	160.11	160.11			0.58988	0.72109	NaN	1	0	Median	40649000	24919000	15730000	208	178;246	191	339	680	680		1	9606
EIMAPWAQTVVTGR	0	1	Unmodified	1557.7973	0.79734779	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	1					20.97	20.97	2	0.014671	15091	DP1134_1	107.09	62.779			NaN	NaN	NaN	0	0	Median	2304400	2304400	0	209	28	192	340	681	681		1	9606
EIVHLQAGQCGNQIGAK	1	0	Unmodified	1821.9156	0.91556545	179	P68371;P04350	TUBB4B;TUBB4A	Tubulin beta-4B chain;Tubulin beta-4A chain	yes	no	0	0	0	3	0			1			16.41	16.41	3	1.0492E-20	8774	DP1134_3	141.06	0			0.80469	0.98251	NaN	1	0	Median	70719000	39827000	30892000	210	179	193	341	682;683;684	682		3	9606
EKLCYVALDFEQEMATAASSSSLEK	2	0	Unmodified	2806.3041	0.30411203	146;175	P60709;Q6S8J3;P63261	ACTB;POTEE;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	1	3.5	1.5		1			1	19.07	19.07	5	0.010426	13664	DP1134_2	45.878	23.536			NaN	NaN	NaN	0	0	Median	673660000	673660000	0	211	146;175	194	342;343	685;686	685		2	9606
EKPYFPIPEEYTFIQNVPLEDR	1	1	Unmodified	2723.3483	0.34828376	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	1	2	0.816	1	1	1			22.332	22.332	3	1.2595999999999998E-80	18379	DP1134_2	195.05	154.66			NaN	NaN	NaN	0	0	Median	46590000	46590000	0	212	186	195	344;345;346	687;688;689;690	688		4	9606
EKRGSDDK	2	1	Unmodified	933.45157	0.45157304	41	O95232	LUC7L3	Luc7-like protein 3	yes	yes	0	0	2	5	0					1	21.612	21.612	1	0.034025	16355	DP1134_5	60.788	3.5069			NaN	NaN	NaN	0	0	Median	39955000	39955000	0	213	41	196	347	691	691		1	9606
ELAEDGYSGVEVR	0	1	Unmodified	1422.6627	0.66268803	102	P23396	RPS3	40S ribosomal protein S3	yes	yes	0	0	0	4	0				1		17.678	17.678	2	4.8992E-07	10885	DP1134_4	131.82	68.603			0.56392	0.58067	NaN	1	0	Median	100310000	62424000	37887000	214	102	197	348	692;693	692		2	9606
ELIEIISGAAALD	0	0	Unmodified	1313.7078	0.70784731	120	P36542	ATP5C1	ATP synthase subunit gamma, mitochondrial	yes	yes	0	0	0	4	0				1		23.776	23.776	2	0.031031	20138	DP1134_4	108.98	44.324			NaN	NaN	NaN	0	0	Median	0	0	0	215	120	198	349	694	694		1	9606
ELIIGDR	0	1	Unmodified	814.45487	0.45486751	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			17.225	17.225	2	6.1385E-05	10039	DP1134_3	144.29	22.611			NaN	NaN	NaN	0	0	Median	30142000	30142000	0	216	104	199	350	695	695		1	9606
ELIPNIPFQMLLR	0	1	Oxidation (M)	1598.8854	0.88543452	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1.33	0.471	2	1				23.322	23.322	2;3	0.0035034	18352	DP1134_1	111.61	111.61			0.40235	0.48344	0.84181	2	0	Median	410550000	288450000	122100000	217	78	200	351;352;353	696;697;698;699;700;701;702	696	88	7	9606
ELIPNIPFQMLLR	0	1	Unmodified	1582.8905	0.8905199	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				24.226	24.226	2	3.1925E-23	21096	DP1134_2	157.96	134.44			0.38173	0.45867	4.1074	2	0	Median	153390000	108270000	45114000	218	78	200	354;355	703;704;705;706;707;708	707		6	9606
ELLTLDEKDPR	1	1	Unmodified	1327.6983	0.69834526	132	P46781	RPS9	40S ribosomal protein S9	yes	yes	0	0	1	4	0				2		17.375	17.375	2;3	2.8515E-13	10208	DP1134_4	154.01	85.165			0.40636	0.43664	NaN	1	0	Median	19824000	15424000	4400000	219	132	201	356;357	709;710	710		2	9606
ELTTEIDNNIEQISSYK	1	0	Unmodified	1995.9637	0.96368066	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			20.911	20.911	2	4.6438E-27	15870	DP1134_3	164.53	115.08		+	NaN	NaN	NaN	0	0	Median	41080000	41080000	0	220	15	202	358	711;712	711		2	9606
EMAQYASNITSVLCQFPSQQIANILDSHAATLNR	0	1	Oxidation (M)	3806.8356	0.83560715	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					23.728	23.728	3	1.1893E-13	19127	DP1134_1	125.61	94.799			NaN	NaN	NaN	0	0	Median	1634600	1634600	0	221	199	203	359	713	713	184	1	9606
EPQVYTLPPSR	0	1	Unmodified	1285.6667	0.6666512	45;47;46	P01857;P01860;P01859	IGHG1;IGHG3;IGHG2	Ig gamma-1 chain C region;Ig gamma-3 chain C region;Ig gamma-2 chain C region	no	no	0	0	0	3	0			1			17.424	17.424	2	0.0042099	10495	DP1134_3	120.27	73.045			NaN	NaN	NaN	0	0	Median	22710000	22710000	0	222	45;47;46	204	360	714	714		1	9606
EPQVYTLPPSREEMTK	1	1	Oxidation (M)	1919.9299	0.92987811	47;46	P01860;P01859	IGHG3;IGHG2	Ig gamma-3 chain C region;Ig gamma-2 chain C region	no	no	0	1	1	3	0			2			16.441	16.441	2;3	7.9895E-26	8718	DP1134_3	158.34	98.92			NaN	NaN	NaN	0	0	Median	118900000	118900000	0	223	47;46	205	361;362	715;716;717	715	48	3	9606
EPQVYVLAPPQEELSK	1	0	Unmodified	1825.9462	0.9461801	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	0	0	2.5	1.12	1	1	1	1		19.87	19.87	2	1.1782E-153	14099	DP1134_3	227.92	188.96		+	NaN	NaN	NaN	0	0	Median	480560000	480560000	0	224	5;6	206	363;364;365;366	718;719;720;721;722;723;724	722		7	
EQEKKLLVSDSNSFMER	2	1	Acetyl (Protein N-term);Oxidation (M)	2097.0048	0.0048339665	222	Q7Z3I7	ZNF572	Zinc finger protein 572	yes	yes	1	1	2	5	0					1	23.125	23.125	2	0.034636	18625	DP1134_5	53.448	8.1011			NaN	NaN	NaN	0	0	Median	0	0	0	225	222	207	367	725	725	225	1	9606
EQIVPKPEEEVAQK	2	0	Unmodified	1622.8516	0.85155143	92	P18621	RPL17	60S ribosomal protein L17	yes	yes	0	0	1	4	0				1		15.817	15.817	3	0.020693	7690	DP1134_4	106.26	76.62			NaN	NaN	NaN	0	0	Median	9068200	9068200	0	226	92	208	368	726	726		1	9606
EQQIVIQSSGGLSKDDIENMVK	2	0	Oxidation (M)	2433.2057	0.20571862	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	1	1	2	0		1				18.164	18.164	3	6.3411E-06	12017	DP1134_2	99.059	60.832			NaN	NaN	NaN	0	0	Median	0	0	0	227	122	209	369	727	727	123	1	9606
EQVANSAFVER	0	1	Unmodified	1248.6099	0.6098646	68	P08238;Q58FF7	HSP90AB1;HSP90AB3P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3	yes	no	0	0	0	2	0		1				16.589	16.589	2	0.024992	9383	DP1134_2	114.4	114.4			0.6259	0.73157	NaN	1	0	Median	11220000	6162100	5057900	228	68	210	370	728	728		0	9606
EREEFLIPIYHQVAVQFADLHDTPGR	0	2	Unmodified	3079.5516	0.55156844	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					22.088	22.088	4	3.5965E-12	16759	DP1134_1	119.87	94.595			0.29493	0.29061	NaN	1	0	Median	29456000	21947000	7508300	229	199	211	371	729;730;731	730		3	9606
ESESVDKVMDQKEHK	3	0	Unmodified	1787.836	0.83597772	203	Q14103	HNRNPD	Heterogeneous nuclear ribonucleoprotein D0	yes	yes	0	0	2	3	0			1			14.093	14.093	3	0.013217	5191	DP1134_3	83.087	48.05			NaN	NaN	NaN	0	0	Median	3008000	0	3008000	230	203	212	372	732	732		1	9606
ESLCQAALGLILK	1	0	Unmodified	1414.7854	0.78538612	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0.816		1	1	1		23.572	23.572	2	3.0433E-16	19784	DP1134_3	152.97	124.96			0.61167	0.74656	7.1741	3	0	Plateau	117550000	73216000	44333000	231	241	213	373;374;375	733;734;735;736;737;738;739;740;741	738		9	9606
ESTLHLVLR	0	1	Unmodified	1066.6135	0.61349341	73	P62987;P62979;P0CG47;P0CG48;A0A2R8Y422	UBA52;RPS27A;UBB;UBC	Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin	yes	no	0	0	0	3	2	1				1	17.881	17.881	2	5.2299E-72	10574	DP1134_5	211.39	149.28			NaN	NaN	NaN	0	0	Median	0	0	0	232	73	214	376;377	742;743	743		2	9606
ESYSIYVYK	1	0	Unmodified	1150.5546	0.55464113	62	Q8N257;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03	HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST2H2BD;HIST2H2BC	Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C	yes	no	0	0	0	5	0					1	18.643	18.643	2	0.014905	11946	DP1134_5	113.41	87.838			0.56658	0.66109	NaN	1	0	Median	49465000	29157000	20308000	233	62	215	378	744	744		1	9606
ESYSVYVYK	1	0	Unmodified	1136.539	0.53899107	36	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K	yes	no	0	0	0	5	0					1	18.043	18.043	2	0.014905	10854	DP1134_5	113.41	56.691			0.52056	0.60739	NaN	1	0	Median	125610000	80821000	44789000	234	36	216	379	745;746	745		2	9606
ETCVDLHLPR	0	1	Unmodified	1238.6078	0.60775611	135	P48594	SERPINB4	Serpin B4	yes	yes	0	0	0	3.33	0.471			2	1		17.609	17.609	2;3	0.0079432	10526	DP1134_3	120.07	69.196			NaN	NaN	NaN	0	0	Median	70508000	70508000	0	235	135	217	380;381;382	747;748;749	747		3	9606
ETYGDMADCCEK	1	0	Unmodified	1477.516	0.51596549	13	CON__P02769			yes	yes	0	0	0	2	0		1				16.079	16.079	2	0.023742	8688	DP1134_2	99.53	96.412		+	NaN	NaN	NaN	0	0	Median	46902000	46902000	0	236	13	218	383	750	750		1	
ETYGDMADCCEKQEPER	1	1	Oxidation (M)	2132.8085	0.8085187	13	CON__P02769			yes	yes	0	1	1	2	0		1				14.618	14.618	3	0.017092	6477	DP1134_2	81.144	76.694		+	NaN	NaN	NaN	0	0	Median	5031300	5031300	0	237	13	219	384	751	751	10	1	
EVASNSELVQSSR	0	1	Unmodified	1404.6845	0.68448611	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	0	3	0			1			15.426	15.426	2	2.0907E-05	7136	DP1134_3	128.81	53.891		+	NaN	NaN	NaN	0	0	Median	25943000	25943000	0	238	14	220	385	752	752		1	9606
EVATNSELVQSGK	1	0	Unmodified	1360.6834	0.68342347	8;19	CON__P02533;P02533;CON__Q04695;Q04695;CON__Q9QWL7	KRT14;KRT17	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17	no	no	0	0	0	1	0	1					15.457	15.457	2	0.007097	6407	DP1134_1	106.49	50.943		+	NaN	NaN	NaN	0	0	Median	22730000	22730000	0	239	8;19	221	386	753	753		1	9606
EVDEQMLNVQNK	1	0	Oxidation (M)	1461.677	0.67695789	66;179	P07437;P68371	TUBB;TUBB4B	Tubulin beta chain;Tubulin beta-4B chain	no	no	0	1	0	3	0			1			15.711	15.711	2	0.0030898	7564	DP1134_3	88.37	33.286			0.68608	0.83768	NaN	1	0	Median	57245000	25778000	31467000	240	66;179	222	387	754;755	754	71	2	9606
EVFFMNTQSIVQLVQR	0	1	Oxidation (M)	1953.9982	0.99823245	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	2					22.197	22.197	2;3	1.8812E-177	16825	DP1134_1	241.39	218.29			0.67544	0.83431	5.304	2	0	Median	119550000	60198000	59349000	241	199	223	388;389	756;757;758;759;760;761;762;763;764	760	185	9	9606
EVFFMNTQSIVQLVQR	0	1	Unmodified	1938.0033	0.003317824	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					23.387	23.387	2;3	0	18578	DP1134_1	331.73	295.95			0.60908	0.75234	6.714	2	0	Median	25970000	16023000	9946800	242	199	223	390;391	765;766;767;768;769;770;771	765		7	9606
EVYQQQQYGSGGR	0	1	Unmodified	1498.6801	0.68006943	245	Q99729	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B	yes	yes	0	0	0	3	0			1			15.076	15.076	2	4.4632999999999996E-145	6499	DP1134_3	227.36	198.67			6.1778	7.5519	NaN	1	0	Median	316810000	41940000	274870000	243	245	224	392	772;773;774	772		3	9606
EYEAEGIAK	1	0	Unmodified	1008.4764	0.47639081	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			15.428	15.428	2	1.1769E-15	6988	DP1134_3	173.68	111.02			NaN	NaN	NaN	0	0	Median	0	0	0	244	251	225	393	775	775		1	9606
EYEAEGIAKDGAK	2	0	Unmodified	1379.6569	0.65687437	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			1			14.62	14.62	2	1.3767000000000001E-69	5727	DP1134_3	197.79	145.31			0.6708	0.72571	NaN	1	0	Median	23683000	15496000	8186700	245	251	226	394	776;777;778;779	776		4	9606
EYEATLEECCAK	1	0	Unmodified	1501.6065	0.60649506	13	CON__P02769			yes	yes	0	0	0	2	0		1				16.576	16.576	2	3.0791E-05	9580	DP1134_2	129.85	108.81		+	NaN	NaN	NaN	0	0	Median	44153000	44153000	0	246	13	227	395	780	780		1	
EYFGEFGEIEAIELPMDPK	1	0	Oxidation (M)	2229.0188	0.018752696	245	Q99729	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B	yes	yes	0	1	0	3	0			1			22.824	22.824	2	2.6854E-13	18687	DP1134_3	148.85	130.65			NaN	NaN	NaN	0	0	Median	5686300	0	5686300	247	245	228	396	781;782	782	257	2	9606
EYQDLLNVK	1	0	Unmodified	1120.5764	0.57643921	69	P08670;P17661;Q16352;P07196;P07197;P12036	VIM;DES;INA;NEFL;NEFM;NEFH	Vimentin;Desmin;Alpha-internexin;Neurofilament light polypeptide;Neurofilament medium polypeptide;Neurofilament heavy polypeptide	yes	no	0	0	0	3	0			1			18.881	18.881	2	0.0095782	12640	DP1134_3	120.62	72.661			NaN	NaN	NaN	0	0	Median	0	0	0	248	69	229	397	783	783		1	9606
FAAGHDAEGSHSHVHFDEK	1	0	Unmodified	2076.9038	0.90381479	249	Q9GZN8	C20orf27	UPF0687 protein C20orf27	yes	yes	0	0	0	3	0			1			14.449	14.449	4	0.00067653	5637	DP1134_3	73.252	50.206			63.434	77.451	NaN	1	0	Median	169960000	2397000	167570000	249	249	230	398	784;785	784		2	9606
FACHSASLTVR	0	1	Unmodified	1247.6081	0.60809046	209	Q15233	NONO	Non-POU domain-containing octamer-binding protein	yes	yes	0	0	0	3	0			1			15.563	15.563	3	0.0082288	7205	DP1134_3	111.86	68.573			NaN	NaN	NaN	0	0	Median	0	0	0	250	209	231	399	786	786		1	9606
FANPFPAAVR	0	1	Unmodified	1088.5767	0.57671398	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			19.427	19.427	2	0.0077087	13488	DP1134_3	96.19	72.667			0.36679	0.44838	NaN	1	0	Median	169330000	122150000	47182000	251	57	232	400	787;788;789;790	787		4	9606
FDAGELITQR	0	1	Unmodified	1148.5826	0.58258722	117	P35232	PHB	Prohibitin	yes	yes	0	0	0	4	0				1		19.178	19.178	2	0.012851	13308	DP1134_4	112.11	42.509			NaN	NaN	NaN	0	0	Median	5378300	5378300	0	252	117	233	401	791	791		1	9606
FEEEGNPYYSSAR	0	1	Unmodified	1547.6529	0.65285163	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			17.225	17.225	2	0	10038	DP1134_3	313.89	282.02			0.51323	0.62739	NaN	1	0	Median	229250000	154440000	74809000	253	251	234	402	792;793;794	792		3	9606
FENAFLSHVVSQHQALLGTIR	0	1	Unmodified	2366.2495	0.24951318	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			21.002	21.002	3	0.033199	15929	DP1134_3	59.163	39.023			NaN	NaN	NaN	0	0	Median	19760000	19760000	0	254	104	235	403	795	795		1	9606
FESPEVAER	0	1	Unmodified	1062.4982	0.49818889	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	0	2	0		1				16.179	16.179	2	0.00040176	8795	DP1134_2	136.27	93.872			NaN	NaN	NaN	0	0	Median	20305000	0	20305000	255	142	236	404	796	796		1	9606
FFVAPFPEVFGK	1	0	Unmodified	1383.7227	0.72270951	10	CON__P02662			yes	yes	0	0	0	2	1	1		1			23.254	23.254	2	0.0024244	19254	DP1134_3	140.75	105.48		+	NaN	NaN	NaN	0	0	Median	33694000	33694000	0	256	10	237	405;406	797;798	798		2	
FGAYIVDGLR	0	1	Unmodified	1109.5869	0.58694431	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					20.233	20.233	2	6.8957E-05	13908	DP1134_1	150.05	108.63			NaN	NaN	NaN	0	0	Median	0	0	0	257	28;199	238	407	799	799		1	9606
FGEVVDCTLK	1	0	Unmodified	1166.5642	0.56415996	203	Q14103	HNRNPD	Heterogeneous nuclear ribonucleoprotein D0	yes	yes	0	0	0	3	0			1			17.925	17.925	2	2.1649E-08	11035	DP1134_3	145.72	0			NaN	NaN	NaN	0	0	Median	117990000	0	117990000	258	203	239	408	800;801	800		2	9606
FGFPEGSVELYAEK	1	0	Unmodified	1571.7508	0.75077476	102	P23396	RPS3	40S ribosomal protein S3	yes	yes	0	0	0	4	0				1		20.89	20.89	2	0.0064256	15868	DP1134_4	105.46	68.932			0.71427	0.82972	NaN	1	0	Median	11900000	7726300	4173600	259	102	240	409	802;803	802		2	9606
FIEIAAR	0	1	Unmodified	818.46504	0.46503826	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	0	2	0		1				17.609	17.609	2	0.022387	11274	DP1134_2	71.949	21.83			0.77459	0.90536	NaN	1	0	Median	93194000	49104000	44090000	260	186	241	410	804	804		1	9606
FIGPSPEVVR	0	1	Unmodified	1099.6026	0.60259438	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2	0.816	1	1	1			17.946	17.946	2	0.0029906	10473	DP1134_1	129.42	89.153			0.42592	0.5261	4.695	3	0	Plateau	943560000	672690000	270880000	261	78	242	411;412;413	805;806;807;808;809;810;811	807		6	9606
FIGPSPEVVRK	1	1	Unmodified	1227.6976	0.69755739	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1.67	0.943	2		1			16.424	16.424	2;3	7.267599999999999E-52	7868	DP1134_1	185.33	127.08			0.38739	0.46737	NaN	1	0	Median	247170000	183030000	64142000	262	78	243	414;415;416	812;813;814;815;816;817;818	812		7	9606
FIHDQTSPNPK	1	0	Unmodified	1282.6306	0.63060004	144	P53007	SLC25A1	Tricarboxylate transport protein, mitochondrial	yes	yes	0	0	0	4	0				2		13.718	13.718	2;3	0.013793	4803	DP1134_4	75.566	47.599			0.51394	0.59701	NaN	1	0	Median	1649000	1508900	140080	263	144	244	417;418	819;820	820		2	9606
FIIGSVSEDNSEDEISNLVK	1	0	Unmodified	2194.0641	0.064122984	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					21.712	21.712	2;3	0	16215	DP1134_1	327.44	295.78			0.57572	0.69569	0.9815	2	0	Median	180020000	108990000	71035000	264	199	245	419;420	821;822;823;824;825	822		5	9606
FKDLGEEHFK	2	0	Unmodified	1248.6139	0.61388734	13	CON__P02769			yes	yes	0	0	1	2.5	1.12	1	1	1	1		15.902	15.902	3	1.5632E-09	7700	DP1134_3	147.3	66.387		+	NaN	NaN	NaN	0	0	Median	519170000	519170000	0	265	13	246	421;422;423;424	826;827;828;829;830;831	829		6	
FKTQEYPEGR	1	1	Unmodified	1253.6041	0.60405094	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	1	1	0	1					14.846	14.846	3	0.0072192	5276	DP1134_1	117.25	90.362			1.0663	1.2865	NaN	1	0	Median	8825900	4419900	4406000	266	28	247	425	832	832		1	9606
FKVEESYDLKDTLR	2	1	Unmodified	1741.8887	0.88866522	110	P29508	SERPINB3	Serpin B3	yes	yes	0	0	2	4	0				1		18.177	18.177	3	0.00080978	11767	DP1134_4	147.52	105.94			NaN	NaN	NaN	0	0	Median	13981000	13981000	0	267	110	248	426	833	833		1	9606
FLEQQNQVLETK	1	0	Unmodified	1475.762	0.76200815	21	CON__Q14CN4-1;CON__Q6IME9;Q14CN4;CON__Q3SY84;CON__Q7RTS7;CON__Q32MB2;Q3SY84;Q7RTS7;Q86Y46	KRT72;KRT71;KRT74;KRT73	Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 73	yes	no	0	0	0	2	0		1				17.811	17.811	2	0.0088416	11534	DP1134_2	109.83	15.52		+	NaN	NaN	NaN	0	0	Median	16649000	16649000	0	268	21	249	427	834	834		1	9606
FLEQQNQVLQTK	1	0	Unmodified	1474.778	0.77799256	51;18	CON__P35908v2;CON__P35908;P35908;CON__Q9R0H5;CON__Q6NXH9;CON__Q6IFZ6;P04264;CON__P04264	KRT2;KRT1	Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1	no	no	0	0	0	3	1.41	1	1	1	1	1	17.489	17.489	2	4.8929E-217	10471	DP1134_3	252.97	124.11		+	NaN	NaN	NaN	0	0	Median	1156000000	1156000000	0	269	18;51	250	428;429;430;431;432	835;836;837;838;839;840;841;842;843	839		9	9606
FLHKHDLDLICR	1	1	Unmodified	1565.8137	0.81366656	121	P36873;P62136	PPP1CC;PPP1CA	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit	yes	no	0	0	1	3	0			1			17.524	17.524	3	0.014687	10442	DP1134_3	98.156	76.905			NaN	NaN	NaN	0	0	Median	55311000	0	55311000	270	121	251	433	844	844		1	9606
FLNVLSPR	0	1	Unmodified	944.54435	0.54435122	89	P17936	IGFBP3	Insulin-like growth factor-binding protein 3	yes	yes	0	0	0	5	0					1	19.188	19.188	2	0.012604	12789	DP1134_5	128.57	67.884			NaN	NaN	NaN	0	0	Median	9498700	9498700	0	271	89	252	434	845	845		1	9606
FLSDVYPDGFK	1	0	Unmodified	1286.6183	0.61830402	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				20.323	20.323	2	3.6157E-15	15285	DP1134_2	156.83	93.751			0.45849	0.55959	NaN	1	0	Median	42121000	27569000	14553000	272	56	253	435	846;847;848	848		3	9606
FLYECPWR	0	1	Unmodified	1169.5328	0.53280025	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				20.278	20.278	2	0.019818	14129	DP1134_1	122.79	84.552			0.51707	0.63869	NaN	1	0	Median	198010000	129110000	68895000	273	78	254	436;437	849;850	849		2	9606
FLYIWPNAR	0	1	Unmodified	1178.6237	0.62366417	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			21.617	21.617	2	3.9748E-48	16809	DP1134_3	185.22	140.5			0.41328	0.5052	NaN	1	0	Median	485900000	340900000	145010000	274	251	255	438	851;852;853;854;855;856	853		6	9606
FMFDLFQQFR	0	1	Oxidation (M)	1393.6489	0.64889264	135;110	P48594;P29508	SERPINB4;SERPINB3	Serpin B4;Serpin B3	no	no	0	1	0	3	0			1			23.372	23.372	2	0.021278	19493	DP1134_3	116.25	59.819			NaN	NaN	NaN	0	0	Median	13991000	13991000	0	275	135;110	256	439	857	857	109	1	9606
FMFDLFQQFR	0	1	Unmodified	1377.654	0.65397802	135;110	P48594;P29508	SERPINB4;SERPINB3	Serpin B4;Serpin B3	no	no	0	0	0	4	1			1		1	24.34	24.34	2	1.0135E-49	20968	DP1134_3	183.74	125.51			NaN	NaN	NaN	0	0	Median	5268700	5268700	0	276	135;110	256	440;441	858;859;860	858		3	9606
FPGQLNADLR	0	1	Unmodified	1129.588	0.58800695	66;179;201	P07437;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;P04350;Q3ZCM7;A6NNZ2;Q13509	TUBB;TUBB6;TUBB1;TUBB4B;TUBB4A;TUBB8;TUBB3	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-3 chain	no	no	0	0	0	3	0			1			18.443	18.443	2	0.013356	12085	DP1134_3	106.68	61.003			0.52687	0.64406	NaN	1	0	Median	206920000	133220000	73699000	277	66;179;201	257	442	861	861		1	9606
FPGQLNADLRK	1	1	Unmodified	1257.683	0.68296996	66;179;201	P07437;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;P04350;Q3ZCM7;A6NNZ2;Q13509	TUBB;TUBB6;TUBB1;TUBB4B;TUBB4A;TUBB8;TUBB3	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-3 chain	no	no	0	0	1	3	0			1			16.949	16.949	3	0.0076438	10195	DP1134_3	60.691	8.9636			0.61021	0.70631	NaN	1	0	Median	94843000	68784000	26059000	278	66;179;201	258	443	862;863	863		2	9606
FQAQSLGTTYIYDIPEMFR	0	1	Oxidation (M)	2295.0882	0.088169665	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	2					22.482	22.482	2;3	3.6632000000000003E-35	17339	DP1134_1	162.88	132			0.5505	0.67998	5.1362	2	0	Median	116350000	72614000	43732000	279	199	259	444;445	864;865;866;867;868;869;870;871	867	186	8	9606
FQAQSLGTTYIYDIPEMFR	0	1	Unmodified	2279.0933	0.093255043	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					23.786	23.786	2	3.6859E-213	19179	DP1134_1	249.28	227.97			0.46215	0.57085	NaN	1	0	Median	15578000	10397000	5180600	280	199	259	446	872;873;874;875;876;877;878	875		7	9606
FSPAGPILSIR	0	1	Unmodified	1156.6604	0.66044361	79	P11940;Q9H361;Q5JQF8;Q4VXU2	PABPC1;PABPC3;PABPC1L2A;PABPC1L	Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like 2;Polyadenylate-binding protein 1-like	yes	no	0	0	0	2	0		1				20.156	20.156	2	0.008421	15156	DP1134_2	114.51	66.939			NaN	NaN	NaN	0	0	Median	15188000	0	15188000	281	79	260	447	879	879		1	9606
FSSCGGGGGSFGAGGGFGSR	0	1	Unmodified	1764.7274	0.72743033	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2.75	1.48	1	1	1		1	18.044	18.044	2	0	11227	DP1134_3	318.07	286.41		+	NaN	NaN	NaN	0	0	Median	554620000	554620000	0	282	51	261	448;449;450;451	880;881;882;883;884;885;886;887	885		8	9606
FVVMVTPEDLK	1	0	Oxidation (M)	1292.6686	0.66862503	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	1	0	1	0	1					19.59	19.59	2	0.0075841	12959	DP1134_1	125.71	62.179			0.50157	0.60609	NaN	1	0	Median	285150000	191760000	93389000	283	28;199	262	452	888;889;890;891	889	32	4	9606
FVVMVTPEDLK	1	0	Unmodified	1276.6737	0.67371041	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1.5	0.5	1	1				20.581	20.581	2	5.9978E-51	14432	DP1134_1	182.76	133.05			0.33437	0.40607	56.113	2	0	Median	205590000	137320000	68261000	284	28;199	262	453;454	892;893;894;895	893		4	9606
GAFGKPQGTVAR	1	1	Unmodified	1187.6411	0.64110515	107	P27635;Q96L21	RPL10;RPL10L	60S ribosomal protein L10;60S ribosomal protein L10-like	yes	no	0	0	1	4	0				1		14.343	14.343	3	0.00058203	5673	DP1134_4	89.266	89.266			0.49049	0.52704	NaN	1	0	Median	26875000	17393000	9482100	285	107	263	455	896;897	896		2	9606
GANAVGYTNYPDNVVFK	1	0	Unmodified	1827.8792	0.87916317	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				19.601	19.601	2	2.0652000000000002E-101	12988	DP1134_1	206.74	164.5			0.49112	0.59644	7.1987	2	0	Median	521910000	348680000	173230000	286	78	264	456;457	898;899;900;901	899		4	9606
GAQDVAGGSNPGAHNPSANLAR	0	1	Unmodified	2059.9784	0.97837672	30	O14654	IRS4	Insulin receptor substrate 4	yes	yes	0	0	0	1	0	1					15.365	15.365	3	0.030105	6071	DP1134_1	55.127	32.497			NaN	NaN	NaN	0	0	Median	4527800	0	4527800	287	30	265	458	902	902		1	9606
GATYGKPVHHGVNQLK	2	0	Unmodified	1704.906	0.90598704	151	P61313	RPL15	60S ribosomal protein L15	yes	yes	0	0	1	4	0				2		13.828	13.828	3;4	9.0383E-13	4920	DP1134_4	139.48	113.12			0.38726	0.40041	3.0425	2	0	Median	6413000	4520200	1892800	288	151	266	459;460	903;904;905;906;907	903		5	9606
GCTATLGNFAK	1	0	Unmodified	1138.5441	0.54409322	85	P15880	RPS2	40S ribosomal protein S2	yes	yes	0	0	0	4	0				1		17.207	17.207	2	1.2222E-08	10089	DP1134_4	146.79	111.98			0.65041	0.75554	NaN	1	0	Median	72878000	41947000	30931000	289	85	267	461	908;909	909		2	9606
GDATVSYEDPPTAK	1	0	Unmodified	1449.6624	0.66235368	189	Q01844	EWSR1	RNA-binding protein EWS	yes	yes	0	0	0	2	0		2				16.079	16.079	2	3.6241E-61	8595	DP1134_2	183.99	137.52			3.3803	4.1257	NaN	1	0	Median	127790000	29118000	98668000	290	189	268	462;463	910;911;912	911		3	9606
GDLTPLDSLIDFKR	1	1	Unmodified	1588.8461	0.84607213	239	Q96QA5	GSDMA	Gasdermin-A	yes	yes	0	0	1	4	0				1		21.65	21.65	2	2.037E-08	16975	DP1134_4	136.5	96.652			NaN	NaN	NaN	0	0	Median	1892600	1892600	0	291	239	269	464	913	913		1	9606
GEATVSFDDPPSAK	1	0	Unmodified	1419.6518	0.65178899	119;235	P35637;Q92804	FUS;TAF15	RNA-binding protein FUS;TATA-binding protein-associated factor 2N	no	no	0	0	0	2	0		1				17.209	17.209	2	2.4287E-37	10321	DP1134_2	169.21	153.07			4.4639	5.4483	NaN	1	0	Median	357250000	66818000	290430000	292	119;235	270	465	914;915;916;917;918	915		5	9606
GEKGDTDIMSDLFGLHPKK	3	0	Oxidation (M)	2103.0307	0.030654786	210	Q15413	RYR3	Ryanodine receptor 3	yes	yes	0	1	2	5	0					1	24.441	24.441	2	0.034943	20546	DP1134_5	108.9	49.064			NaN	NaN	NaN	0	0	Median	2449800	2449800	0	293	210	271	466	919	919	217	1	9606
GFAFVQYVNER	0	1	Unmodified	1328.6513	0.65133548	67	P07910	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	yes	yes	0	0	0	3	0			1			20.427	20.427	2	0.0065624	15156	DP1134_3	100.25	80.215			1.4226	1.739	NaN	1	0	Median	27436000	10744000	16692000	294	67	272	467	920	920		1	9606
GFGFILFK	1	0	Unmodified	927.52182	0.52182486	245	Q99729	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B	yes	yes	0	0	0	3.5	0.5			1	1		22.789	22.789	2	0.034506	18681	DP1134_4	60.358	28.423			6.6876	7.9645	1.6197	2	0	Median	174160000	21802000	152360000	295	245	273	468;469	921;922	922		1	9606
GFGFVLFK	1	0	Unmodified	913.50617	0.5061748	203	Q14103;O14979	HNRNPD;HNRNPDL	Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein D-like	yes	no	0	0	0	3	0			2			22.328	22.328	1;2	0.0059134	17898	DP1134_3	71.378	39.799			5.3195	6.495	1.4068	2	0	Median	157820000	23334000	134480000	296	203	274	470;471	923;924	924		0	9606
GFGFVTYSCVEEVDAAMCARPHK	1	1	Oxidation (M)	2646.1665	0.16651312	141	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	yes	yes	0	1	1	3	0			1			19.595	19.595	3	0.0011112	13734	DP1134_3	82.367	56.362			NaN	NaN	NaN	0	0	Median	0	0	0	297	141	275	472	925	925	130	1	9606
GFSGGMKDMYDQVLK	2	0	2 Oxidation (M)	1706.7644	0.76439269	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	2	1	1	0	1					16.992	16.992	3	0.0013726	8820	DP1134_1	70.373	58.952			0.67768	0.74331	NaN	1	0	Median	423240000	251020000	172220000	298	28;199	276	473	926;927;928	927	33;34	3	9606
GFSGGMKDMYDQVLK	2	0	Oxidation (M)	1690.7695	0.76947806	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	1	1	1	0	1					18.066	18.066	3	0.0012227	10728	DP1134_1	79.885	79.885			0.63512	0.69663	NaN	1	0	Median	106200000	63424000	42779000	299	28;199	276	474	929	929	33;34	0	9606
GFSSGSAVVSGGSR	0	1	Unmodified	1253.6	0.60002819	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	no	no	0	0	0	5	0					1	15.77	15.77	2	1.5659E-76	7147	DP1134_5	195.83	160.39		+	NaN	NaN	NaN	0	0	Median	64403000	64403000	0	300	18	277	475	930;931	930		2	9606
GFVDDIIQPSSTR	0	1	Unmodified	1433.7151	0.71505795	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			2			20.027	20.027	2	3.6573E-249	14387	DP1134_3	261.16	210.1			0.43768	0.53503	NaN	1	0	Median	139260000	105050000	34210000	301	57	278	476;477	932;933;934;935	933		4	9606
GFYPSDIAVEWESNGQPENNYK	1	0	Unmodified	2543.1241	0.12409748	45	P01857	IGHG1	Ig gamma-1 chain C region	no	no	0	0	0	3	0			1			21.607	21.607	2	4.7226E-05	16833	DP1134_3	130.47	87.438			NaN	NaN	NaN	0	0	Median	5654400	5654400	0	302	45	279	478	936	936		1	9606
GGAYYPVTVK	1	0	Unmodified	1053.5495	0.54949617	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.5	0.5			1	1		17.12	17.12	2	0.015017	9852	DP1134_3	86.136	57.927			0.49119	0.58497	1.3205	2	0	Median	668990000	452330000	216660000	303	251	280	479;480	937;938;939;940	937		4	9606
GGAYYPVTVKK	2	0	Unmodified	1181.6445	0.64445919	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			2			15.514	15.514	2;3	0.00081544	7179	DP1134_3	88.134	61.384			0.50485	0.53603	10.202	2	0	Median	91915000	60483000	31431000	304	251	281	481;482	941;942;943;944	942		4	9606
GGDMSKNVSQSQMAK	2	0	Unmodified	1566.713	0.71302582	148	P61011	SRP54	Signal recognition particle 54 kDa protein	yes	yes	0	0	1	4	1			1		1	18.782	18.782	2	0.014866	12537	DP1134_3	112.83	34.277			NaN	NaN	NaN	0	0	Median	79540000	79540000	0	305	148	282	483;484	945;946	945		2	9606
GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR	0	1	Unmodified	2382.9446	0.94456998	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2	1	1		1			15.472	15.472	2	0	6408	DP1134_1	353.55	275.3		+	NaN	NaN	NaN	0	0	Median	62864000	62864000	0	306	51	283	485;486	947;948;949	947		3	9606
GGGGNFGPGPGSNFR	0	1	Unmodified	1376.6222	0.62216062	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	0	0	3.5	0.5			1	1		17.216	17.216	2	9.986599999999999E-93	10048	DP1134_4	203.03	172.78			2.4611	2.7613	20.524	2	0	Median	365560000	100410000	265150000	307	99	284	487;488	950;951;952;953;954	953		5	9606
GGKPEPPAMPQPVPTA	1	0	Oxidation (M)	1588.7919	0.79192806	102	P23396	RPS3	40S ribosomal protein S3	yes	yes	0	1	1	4	0				1		15.897	15.897	2	0.0014992	7971	DP1134_4	94.538	72.51			0.2283	0.2652	NaN	1	0	Median	19724000	16594000	3130500	308	102	285	489	955;956;957	956	105	3	9606
GGNFGFGDSR	0	1	Unmodified	1012.4363	0.43625733	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	0	0	3	0			1			17.424	17.424	2	2.8774E-16	10350	DP1134_3	137.13	109.88			3.6076	4.41	NaN	1	0	Median	244100000	46400000	197700000	309	99	286	490	958	958		0	9606
GGNRFEPYANPTKR	1	2	Unmodified	1605.8012	0.80118762	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	2	2	0		1				15.357	15.357	4	0.0026491	7491	DP1134_2	65.809	50.307			0.42258	0.46951	NaN	1	0	Median	11005000	7667700	3337400	310	142	287	491	959	959		1	9606
GGSGGGGSISGGGYGSGGGSGGR	0	1	Unmodified	1740.7412	0.74116614	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	2.67	1.7	1	1			1	14.566	14.566	2	0	4960	DP1134_1	279.19	206.34		+	NaN	NaN	NaN	0	0	Median	18559000	18559000	0	311	18	288	492;493;494	960;961;962;963;964	960		5	9606
GGSWVVIDSSINPR	0	1	Unmodified	1485.7576	0.75759147	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					20.174	20.174	2	5.364900000000001E-131	13834	DP1134_1	221.5	221.5			0.45988	0.56805	NaN	1	0	Median	233230000	153620000	79615000	312	199	289	495	965;966;967;968	966		4	9606
GHYTEGAELVDSVLDVVR	0	1	Unmodified	1957.9745	0.97452012	66;179;201	P07437;P68371;Q13509	TUBB;TUBB4B;TUBB3	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain	no	no	0	0	0	3	0			1			22.502	22.502	3	0.00012312	18146	DP1134_3	113.11	89.275			0.46202	0.56478	NaN	1	0	Median	5886700	4223000	1663700	313	66;179;201	290	496	969;970;971	969		3	9606
GHYTEGAELVDSVLDVVRK	1	1	Unmodified	2086.0695	0.069483134	66;179;201	P07437;P68371;Q13509	TUBB;TUBB4B;TUBB3	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain	no	no	0	0	1	3	0			1			21.524	21.524	3	4.482E-57	16682	DP1134_3	177.66	106.37			0.63007	0.7293	NaN	1	0	Median	19904000	11125000	8779400	314	66;179;201	291	497	972;973;974	972		3	9606
GIGMGNIGPAGMGMEGIGFGINK	1	0	3 Oxidation (M)	2225.0279	0.027894369	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	3	0	2	0		1				19.658	19.658	2	5.5604E-08	14345	DP1134_2	111.64	77.892			NaN	NaN	NaN	0	0	Median	0	0	0	315	142	292	498	975	975	134;135;136	1	9606
GIGMGNIGPAGMGMEGIGFGINK	1	0	2 Oxidation (M)	2209.033	0.032979747	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	2	0	2	0		1				20.648	20.648	2	2.2515E-05	15857	DP1134_2	92.457	62.281			NaN	NaN	NaN	0	0	Median	0	0	0	316	142	292	499	976	976	134;135;136	1	9606
GIGMGNIGPAGMGMEGIGFGINK	1	0	Oxidation (M)	2193.0381	0.038065125	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	1	0	2	0		1				21.613	21.613	2	5.816E-12	17302	DP1134_2	149.22	121.95			NaN	NaN	NaN	0	0	Median	0	0	0	317	142	292	500	977	977	134;135;136	1	9606
GLAPVQAYLHIPDIIK	1	0	Unmodified	1747.0032	0.0032414695	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.64	1.23	2	4	2	2	1	21.938	21.938	2;3	6.5332E-49	16374	DP1134_1	168.76	150.03			0.38859	0.47429	21.292	7	0	Median	472780000	340710000	132070000	318	78	293	501;502;503;504;505;506;507;508;509;510;511	978;979;980;981;982;983;984;985;986;987;988;989;990;991;992;993;994;995;996;997;998;999;1000;1001;1002;1003;1004	982		27	9606
GLGTDEDTLIEILASR	0	1	Unmodified	1701.8785	0.87849447	49	P04083	ANXA1	Annexin A1	yes	yes	0	0	0	4	0				1		23.67	23.67	2	2.6173E-18	20024	DP1134_4	176.87	80.699			NaN	NaN	NaN	0	0	Median	2844800	2844800	0	319	49	294	512	1005;1006	1005		2	9606
GLVLIAFSQYLQQCPFDEHVK	1	0	Unmodified	2491.257	0.25696633	13	CON__P02769			yes	yes	0	0	0	2.33	1.25	1	1		1		23.946	23.946	3	2.7471999999999996E-28	20724	DP1134_2	160.45	123.7		+	NaN	NaN	NaN	0	0	Median	17159000	17159000	0	320	13	295	513;514;515	1007;1008;1009;1010;1011;1012;1013;1014;1015;1016	1011		10	
GLVLSGVLHK	1	0	Unmodified	1021.6284	0.6284152	110	P29508	SERPINB3	Serpin B3	yes	yes	0	0	0	3.5	0.5			1	1		18.153	18.153	2	0.021356	11605	DP1134_3	98.523	58.255			NaN	NaN	NaN	0	0	Median	99454000	99454000	0	321	110	296	516;517	1017;1018	1017		2	9606
GLVPEDDTKEK	2	0	Unmodified	1229.6139	0.61394692	212	Q15459	SF3A1	Splicing factor 3A subunit 1	yes	yes	0	0	1	2	0		1				14.806	14.806	3	0.0035013	6757	DP1134_2	107.03	67.722			NaN	NaN	NaN	0	0	Median	11462000	11462000	0	322	212	297	518	1019	1019		1	9606
GLVPPNASR	0	1	Unmodified	909.50321	0.50321468	134	P47929	LGALS7	Galectin-7	yes	yes	0	0	0	5	0					1	15.425	15.425	2	0.016854	6655	DP1134_5	113.89	41.94			NaN	NaN	NaN	0	0	Median	46971000	46971000	0	323	134	298	519	1020	1020		1	9606
GLYAAFDCTATMK	1	0	Oxidation (M)	1463.6425	0.64248664	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	2	1	1		1			18.859	18.859	2	0.006611	12673	DP1134_3	113.44	53.011			0.66781	0.80697	NaN	1	0	Median	188220000	117590000	70630000	324	78	299	520;521	1021;1022;1023	1023	89	3	9606
GMGGAFVLVLYDELKK	2	0	Unmodified	1738.9328	0.93277864	80	P12236	SLC25A6	ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed	yes	yes	0	0	1	4	0				2		23.289	23.289	2;3	0.0028261	19457	DP1134_4	60.474	0			0.51943	0.53707	NaN	1	0	Median	5561600	4138700	1422900	325	80	300	522;523	1024;1025;1026;1027	1025		4	9606
GMGGHGYGGAGDASSGFHGGHFVHMR	0	1	2 Oxidation (M)	2574.0666	0.066556571	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	2	0	3	0			1			15.244	15.244	4	0.0029027	6770	DP1134_3	67.668	56.033			NaN	NaN	NaN	0	0	Median	43335000	0	43335000	326	112	301	524	1028	1028	114;115	1	9606
GMSAEYSFPIWKTSHTVKWEGVWR	2	1	Oxidation (M)	2897.3959	0.39591943	268	Q9Y512	SAMM50	Sorting and assembly machinery component 50 homolog	yes	yes	0	1	2	2	0		1				22.745	22.745	3	0.018253	19023	DP1134_2	56.327	18.503			NaN	NaN	NaN	0	0	Median	2901000	2901000	0	327	268	302	525	1029	1029	288	1	9606
GMTLVTPLQLLLFASK	1	0	Oxidation (M)	1746.9954	0.9953789	194	Q08211	DHX9	ATP-dependent RNA helicase A	yes	yes	0	1	0	1	0	2					25.099	25.099	2	0.0066951	21040	DP1134_1	119.21	89.074			NaN	NaN	NaN	0	0	Median	1927200	0	1927200	328	194	303	526;527	1030;1031;1032	1031	175	3	9606
GNFHAVYRDDLK	1	1	Unmodified	1433.7052	0.70516197	55	P05109	S100A8	Protein S100-A8;Protein S100-A8, N-terminally processed	yes	yes	0	0	1	5	0					2	15.885	15.885	2;3	0.022629	7452	DP1134_5	87.667	37.216			NaN	NaN	NaN	0	0	Median	84212000	84212000	0	329	55	304	528;529	1033;1034	1033		2	9606
GNFHAVYRDDLKK	2	1	Unmodified	1561.8001	0.80012499	55	P05109	S100A8	Protein S100-A8;Protein S100-A8, N-terminally processed	yes	yes	0	0	2	5	0					1	15.085	15.085	3	0.012945	6127	DP1134_5	83.137	36.855			NaN	NaN	NaN	0	0	Median	160850000	160850000	0	330	55	305	530	1035	1035		1	9606
GNIPTLNR	0	1	Unmodified	883.48756	0.48756462	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					16.424	16.424	2	0.0088596	7623	DP1134_1	105.39	52.039			0.4526	0.55905	NaN	1	0	Median	367060000	248630000	118430000	331	199	306	531	1036;1037;1038;1039	1036		4	9606
GNLANVIR	0	1	Unmodified	855.49265	0.49265	80	P12236	SLC25A6	ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed	no	no	0	0	0	4	0				1		16.915	16.915	2	0.010259	9601	DP1134_4	101.21	55.196			0.74235	0.76441	NaN	1	0	Median	144820000	78136000	66688000	332	80	307	532	1040	1040		1	9606
GPSVFPLAPCSR	0	1	Unmodified	1286.6441	0.64414162	47;46	P01860;P01859	IGHG3;IGHG2	Ig gamma-3 chain C region;Ig gamma-2 chain C region	no	no	0	0	0	3	0			1			19.428	19.428	2	7.8942E-24	13487	DP1134_3	163.16	61.779			NaN	NaN	NaN	0	0	Median	164540000	164540000	0	333	47;46	308	533	1041;1042	1041		2	9606
GPSVFPLAPSSK	1	0	Unmodified	1185.6394	0.63937381	45	P01857	IGHG1	Ig gamma-1 chain C region	yes	yes	0	0	0	3.5	0.5			1	1		18.911	18.911	2	1.4795999999999999E-23	12839	DP1134_3	160.53	87.652			NaN	NaN	NaN	0	0	Median	176430000	176430000	0	334	45	309	534;535	1043;1044;1045;1046;1047	1044		5	9606
GQIGAPMPGK	1	0	Oxidation (M)	970.4906	0.49060109	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1	0	1					14.627	14.627	2	0.019404	5453	DP1134_1	67.494	35.623			0.52358	0.63269	NaN	1	0	Median	7655500	4702500	2953000	335	78	310	536	1048	1048	90	0	9606
GQIGAPMPGK	1	0	Unmodified	954.49569	0.49568646	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	1					15.644	15.644	2	0.028523	6576	DP1134_1	75.738	41.649			0.44682	0.53993	NaN	1	0	Median	206120000	139950000	66165000	336	78	310	537	1049	1049		0	9606
GQPFEVLIIASDDGFK	1	0	Unmodified	1734.8829	0.88285156	134	P47929	LGALS7	Galectin-7	yes	yes	0	0	0	5	0					1	23.192	23.192	2	2.5292E-48	18675	DP1134_5	176.99	111.15			NaN	NaN	NaN	0	0	Median	16573000	16573000	0	337	134	311	538	1050;1051	1050		2	9606
GQTGGDVNVEMDAAPGVDLSR	0	1	Oxidation (M)	2102.9539	0.95386103	14	CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	1	0	3	0			1			18.025	18.025	2	0.021885	11460	DP1134_3	116.43	73.875		+	NaN	NaN	NaN	0	0	Median	30051000	30051000	0	338	14	312	539	1052	1052	13	1	9606
GQVLPAHTLLNTVDVELIYEGVK	1	0	Unmodified	2507.3635	0.36353989	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					22.603	22.603	3	6.439299999999999E-66	17436	DP1134_1	179.17	179.17			0.54183	0.65474	NaN	1	0	Median	18409000	12099000	6310200	339	199	313	540	1053;1054;1055	1053		3	9606
GSFSDTGLGDGK	1	0	Unmodified	1139.5095	0.50948185	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	0	1.5	0.5	1	1				16.615	16.615	2	0.00045589	8123	DP1134_1	122.96	68.351			NaN	NaN	NaN	0	0	Median	65343000	65343000	0	340	266	314	541;542	1056;1057	1056		2	9606
GSLGGGFSSGGFSGGSFSR	0	1	Unmodified	1706.7649	0.76486169	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			19.528	19.528	2	0.00035591	13789	DP1134_3	160.48	125.72		+	NaN	NaN	NaN	0	0	Median	251220000	251220000	0	341	15	315	543	1058	1058		1	9606
GSSGGGCFGGSSGGYGGLGGFGGGSFR	0	1	Unmodified	2341.9771	0.97705609	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			20.327	20.327	2	2.9103E-84	15004	DP1134_3	193.42	179.33		+	NaN	NaN	NaN	0	0	Median	54917000	54917000	0	342	15	316	544	1059	1059		1	9606
GSVLEPEGTVEIK	1	0	Unmodified	1356.7137	0.71366097	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					18.294	18.294	2	1.9845E-23	10992	DP1134_1	160.77	104.76			0.4621	0.5584	NaN	1	0	Median	1118500000	760970000	357530000	343	199	317	545	1060;1061;1062	1062		3	9606
GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR	0	1	Unmodified	3311.3008	0.30084566	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	3.67	1.25		1		1	1	15.921	15.921	3	4.404699999999999E-137	8470	DP1134_2	214.15	164.33		+	NaN	NaN	NaN	0	0	Median	85626000	85626000	0	344	51	318	546;547;548	1063;1064;1065;1066	1063		4	9606
GSYSCEVTHEGSTVTK	1	0	Unmodified	1740.7625	0.76247843	22	CON__Q1RMN8			yes	yes	0	0	0	4.5	0.5				1	1	15.075	15.075	3	1.5591E-08	6423	DP1134_4	138.73	101.36		+	NaN	NaN	NaN	0	0	Median	358510000	358510000	0	345	22	319	549;550	1067;1068;1069;1070	1067		4	
GTGIVSAPVPK	1	0	Unmodified	1024.5917	0.59169534	85	P15880	RPS2	40S ribosomal protein S2	yes	yes	0	0	0	4	0				1		16.381	16.381	2	0.020018	8585	DP1134_4	114.89	114.89			0.47023	0.54624	NaN	1	0	Median	86466000	58479000	27986000	346	85	320	551	1071	1071		0	9606
GTHFVQLCCQR	0	1	Unmodified	1404.6391	0.63907301	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			2			16.205	16.205	2;3	3.2384E-29	8373	DP1134_3	172.88	153.62			0.57228	0.69957	1.005	2	0	Median	226580000	138350000	88232000	347	251	321	552;553	1072;1073;1074;1075	1072		4	9606
GTNYLADVFEKK	2	0	Unmodified	1383.7034	0.70343063	111	P31151	S100A7	Protein S100-A7	yes	yes	0	0	1	5	0					1	19.486	19.486	2	0.00011267	13240	DP1134_5	123.62	87.172			NaN	NaN	NaN	0	0	Median	41098000	41098000	0	348	111	322	554	1076	1076		1	9606
GTPLDTEVPMER	0	1	Oxidation (M)	1359.634	0.63403044	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	2	0.816	1	1	1			17.09	17.09	2	1.2237E-22	10356	DP1134_2	159.34	142.5			0.3873	0.4784	15.509	3	0	Median	939350000	673960000	265390000	349	78	323	555;556;557	1077;1078;1079;1080;1081;1082	1080	91	5	9606
GTPLDTEVPMER	0	1	Unmodified	1343.6391	0.63911582	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2	0.816	1	1	1			18.168	18.168	2	4.1627999999999994E-21	10839	DP1134_1	172.98	131.55			0.36797	0.4301	NaN	1	0	Median	152700000	113340000	39359000	350	78	323	558;559;560	1083;1084;1085	1083		3	9606
GTWVQLK	1	0	Unmodified	830.46504	0.46503826	130	P46778	RPL21	60S ribosomal protein L21	yes	yes	0	0	0	4	0				1		17.734	17.734	2	4.661E-05	11209	DP1134_4	84.359	26.906			0.23266	0.27026	NaN	1	0	Median	15170000	12367000	2802600	351	130	324	561	1086	1086		0	9606
GVDENFDVSEELLDTVPMTGTK	1	0	Oxidation (M)	2411.105	0.10500152	220	Q86UP8;Q6EKJ0	GTF2IRD2;GTF2IRD2B	General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B	yes	no	0	1	0	5	0					1	19.686	19.686	3	0.034443	13668	DP1134_5	41.292	12.174			NaN	NaN	NaN	0	0	Median	18280000	0	18280000	352	220	325	562	1087	1087	223	1	9606
GVDEVTIVNILTNR	0	1	Unmodified	1541.8413	0.8413211	65	P07355	ANXA2	Annexin A2	yes	yes	0	0	0	3.5	0.5			1	1		22.675	22.675	2	1.4249E-111	18488	DP1134_4	211.46	94.442			NaN	NaN	NaN	0	0	Median	4778300	4778300	0	353	65	326	563;564	1088;1089;1090	1089		3	9606
GVEEEEEDGEMRE	0	1	Oxidation (M)	1552.5835	0.58351101	162	P62306	SNRPF	Small nuclear ribonucleoprotein F	yes	yes	0	1	1	5	0					1	14.796	14.796	2	0.020946	5710	DP1134_5	84.198	83.714			NaN	NaN	NaN	0	0	Median	1067600	1067600	0	354	162	327	565	1091	1091	157	1	9606
GVETIANDVVSLATK	1	0	Unmodified	1515.8144	0.81443765	75	P10515	DLAT	Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	yes	yes	0	0	0	2	0		1				22.089	22.089	2	0.0051153	18040	DP1134_2	132.5	90.166			NaN	NaN	NaN	0	0	Median	3219400	3219400	0	355	75	328	566	1092	1092		1	9606
GVISDILDWK	1	0	Unmodified	1144.6128	0.61282471	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	2.5	1.5	1			1		23.316	23.316	2	8.392E-65	18501	DP1134_1	194.29	140.33			0.6239	0.75392	NaN	1	0	Median	125760000	77531000	48234000	356	199	329	567;568	1093;1094;1095;1096;1097	1093		5	9606
GVISDILEWK	1	0	Unmodified	1158.6285	0.62847478	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	1					23.325	23.325	2	0.012046	18520	DP1134_1	109.48	59.445			0.76909	0.92936	NaN	1	0	Median	5437300	3043100	2394200	357	28	330	569	1098;1099	1098		2	9606
GVLMAQKEGKR	2	1	Oxidation (M)	1231.6707	0.67069072	252	Q9HCG1	ZNF160	Zinc finger protein 160	yes	yes	0	1	2	3	0			1			16.148	16.148	3	0.022657	8168	DP1134_3	73.841	17.41			NaN	NaN	NaN	0	0	Median	0	0	0	358	252	331	570	1100	1100	270	1	9606
GVTHNIALLR	0	1	Unmodified	1092.6404	0.64037687	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		2				17.144	17.144	2;3	0.0070949	10236	DP1134_2	93.598	93.598			0.55429	0.64787	4.6082	2	0	Median	248930000	153660000	95267000	359	56	332	571;572	1101;1102;1103;1104	1101		4	9606
GYGFVHFETQEAAER	0	1	Unmodified	1739.7903	0.79034816	79	P11940	PABPC1	Polyadenylate-binding protein 1	yes	yes	0	0	0	2	0		1				18.632	18.632	3	0.0031862	12956	DP1134_2	109.99	81.938			NaN	NaN	NaN	0	0	Median	10375000	10375000	0	360	79	333	573	1105	1105		1	9606
GYSFTTTAER	0	1	Unmodified	1131.5197	0.51965261	146;175	P60709;P63261	ACTB;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	0	3.33	0.471			2	1		16.949	16.949	2	9.8201E-05	9414	DP1134_3	132.76	76.636			NaN	NaN	NaN	0	0	Median	211800000	211800000	0	361	146;175	334	574;575;576	1106;1107;1108	1106		3	9606
GYVKDVDDGLQAAEEVGYPVMIK	2	0	Oxidation (M)	2511.2203	0.22030605	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	2					21.064	21.064	3	6.819300000000001E-25	15110	DP1134_1	140.84	140.84			NaN	NaN	NaN	0	0	Median	169130000	110790000	58335000	362	199	335	577;578	1109;1110	1109	182	2	9606
GYVKDVDDGLQAAEEVGYPVMIK	2	0	Unmodified	2495.2254	0.22539143	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					21.78	21.78	3	0.0029942	16146	DP1134_1	91.091	42.535			NaN	NaN	NaN	0	0	Median	26929000	26929000	0	363	199	335	579	1111	1111		1	9606
HAIPIIK	1	0	Unmodified	790.50651	0.50650915	27	O00571;O15523	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	yes	no	0	0	0	2	0		1				15.698	15.698	2	0.0013609	8048	DP1134_2	103.41	66.822			2.2466	2.742	NaN	1	0	Median	20925000	6636900	14289000	364	27	336	580	1112;1113	1112		2	9606
HDLDLICR	0	1	Unmodified	1040.5073	0.50731378	121	P36873;P62136;P62140	PPP1CC;PPP1CA;PPP1CB	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit	yes	no	0	0	0	3	0			1			17.149	17.149	2	2.1944E-09	9854	DP1134_3	149.4	92.223			NaN	NaN	NaN	0	0	Median	88057000	0	88057000	365	121	337	581	1114	1114		1	9606
HFLQMLSLENCR	0	1	Oxidation (M)	1562.7334	0.73336733	230	Q8WX94	NLRP7	NACHT, LRR and PYD domains-containing protein 7	yes	yes	0	1	0	1	0	1					16.917	16.917	2	0.011232	8706	DP1134_1	113.71	44.921			NaN	NaN	NaN	0	0	Median	21061000	21061000	0	366	230	338	582	1115	1115	230	1	9606
HGEEVTPEDVLSAAMYPDVFAHFK	1	0	Oxidation (M)	2704.2479	0.24791778	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1.5	0.5	2	2				22.027	22.027	3;4	4.5006000000000005E-31	16482	DP1134_1	162.83	126.72			0.39263	0.47609	34.777	3	0	Plateau	164800000	146080000	18723000	367	78	339	583;584;585;586	1116;1117;1118;1119;1120;1121;1122;1123;1124;1125;1126;1127	1118	92	12	9606
HGEEVTPEDVLSAAMYPDVFAHFK	1	0	Unmodified	2688.253	0.25300316	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				22.974	22.974	3	1.9097E-75	17948	DP1134_1	175.77	149.7			0.3382	0.40867	NaN	1	0	Median	38431000	28807000	9623700	368	78	339	587;588	1128;1129;1130;1131;1132;1133;1134;1135;1136;1137	1128		10	9606
HGGGGGGFGGGGFGSR	0	1	Unmodified	1319.5755	0.57554478	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	2.5	0.5		1	1			15.699	15.699	3	0.0010939	7383	DP1134_3	115.12	99.172		+	NaN	NaN	NaN	0	0	Median	30697000	30697000	0	369	18	340	589;590	1138;1139	1139		2	9606
HGNALWLNER	0	1	Unmodified	1208.6051	0.60505399	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				17.517	17.517	2	0.014019	11129	DP1134_2	96.668	72.638			0.52214	0.61029	NaN	1	0	Median	29729000	19774000	9955000	370	56	341	591	1140	1140		1	9606
HGSLGFLPR	0	1	Unmodified	982.53485	0.53484916	123	P39023	RPL3	60S ribosomal protein L3	yes	yes	0	0	0	3	0			1			17.626	17.626	2	2.6307E-10	10682	DP1134_3	149.4	113.52			NaN	NaN	NaN	0	0	Median	21580000	12316000	9263100	371	123	342	592	1141	1141		0	9606
HHGTPMLLDGVK	1	0	Oxidation (M)	1319.6656	0.66560534	249	Q9GZN8	C20orf27	UPF0687 protein C20orf27	yes	yes	0	1	0	3	0			1			15.939	15.939	3	0.0046886	7941	DP1134_3	95.618	59.171			NaN	NaN	NaN	0	0	Median	35939000	0	35939000	372	249	343	593	1142;1143;1144	1144	262	3	9606
HIDFSLR	0	1	Unmodified	886.4661	0.4661009	132	P46781	RPS9	40S ribosomal protein S9	yes	yes	0	0	0	4	0				1		17.678	17.678	2	1.6931E-75	10921	DP1134_4	200.96	57.778			0.76815	0.79098	NaN	1	0	Median	59510000	33809000	25701000	373	132	344	594	1145;1146;1147	1146		3	9606
HIEIQVLGDK	1	0	Unmodified	1150.6346	0.63462279	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		2				17.71	17.71	2	2.295E-38	11235	DP1134_2	179.42	119.49			NaN	NaN	NaN	0	0	Median	59533000	0	59533000	374	56	345	595;596	1148;1149	1148		2	9606
HIEVQILGDQYGNILHLYER	0	1	Unmodified	2409.2441	0.24409346	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	1					21.713	21.713	3	0.0031337	16231	DP1134_1	118.16	90.437			NaN	NaN	NaN	0	0	Median	19689000	19689000	0	375	78	346	597	1150	1150		1	9606
HLDLYAR	0	1	Unmodified	886.4661	0.4661009	39	O94823	ATP10B	Probable phospholipid-transporting ATPase VB	yes	yes	0	0	0	4	0				1		17.678	17.678	2	0.0019356	10991	DP1134_4	124.32	9.738			0.76815	0.79098	NaN	1	0	Median	59510000	33809000	25701000	376	39	347	598	1151	1151		1	9606
HLEPALAFQLELNR	0	1	Unmodified	1649.8889	0.88893999	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	2					20.748	20.748	2;3	1.3959E-21	14730	DP1134_1	127.71	96.497			0.3986	0.49236	6.8447	2	0	Median	40686000	30373000	10313000	377	28;199	348	599;600	1152;1153;1154;1155;1156;1157	1155		6	9606
HLEVQILADQYGNAISLFGR	0	1	Unmodified	2243.1699	0.16986588	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					23.003	23.003	2;3	3.7607E-13	18047	DP1134_1	118.54	89.23			NaN	NaN	NaN	0	0	Median	3006100	3006100	0	378	199	349	601;602	1158;1159;1160	1159		3	9606
HLLIGVSSDR	0	1	Unmodified	1095.6037	0.60365701	120	P36542	ATP5C1	ATP synthase subunit gamma, mitochondrial	yes	yes	0	0	0	4	0				1		16.828	16.828	2	7.5716E-13	9359	DP1134_4	153.04	114.24			0.63382	0.65266	NaN	1	0	Median	23593000	14921000	8671500	379	120	350	603	1161;1162;1163	1161		3	9606
HLPSTEPDPHVVR	0	1	Unmodified	1482.7579	0.75792582	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	0	0	2	0		1				15.207	15.207	3	0.0011871	7374	DP1134_2	106.26	87.633			3.2487	3.7971	NaN	1	0	Median	45149000	9173000	35976000	380	248	351	604	1164;1165;1166	1164		3	9606
HLQLAIR	0	1	Unmodified	849.51847	0.51847082	54;72	Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104;Q71UI9;P0C0S5	HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;H2AFV;H2AFZ	Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z	no	no	0	0	0	5	0					1	16.46	16.46	2	1.6122E-11	8446	DP1134_5	153.61	46.061			0.5907	0.61011	NaN	1	0	Median	342740000	213170000	129570000	381	54;72	352	605	1167	1167		1	9606
HLQLAIRNDEELNK	1	1	Unmodified	1691.8955	0.89548193	54	Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104	HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX	Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX	yes	no	0	0	1	5	0					1	16.754	16.754	3	0.021889	8833	DP1134_5	58.781	40.819			0.52686	0.57435	NaN	1	0	Median	53424000	29821000	23603000	382	54	353	606	1168	1168		1	9606
HLVDEPQNLIK	1	0	Unmodified	1304.7089	0.70885036	13	CON__P02769			yes	yes	0	0	0	2.33	1.25	1	1		1		17.463	17.463	2	7.4032E-159	9623	DP1134_1	242.39	152.02		+	NaN	NaN	NaN	0	0	Median	656370000	656370000	0	383	13	354	607;608;609	1169;1170;1171;1172;1173	1169		5	
HMFHVAWVDPEDPYK	1	0	Unmodified	1869.8508	0.85083993	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					20.003	20.003	3	0.0028216	13494	DP1134_1	68.83	39.363			0.33377	0.40333	NaN	1	0	Median	14474000	11265000	3208800	384	199	355	610	1174	1174		1	9606
HMFHVAWVDPEDPYKGYR	1	1	Oxidation (M)	2262.0317	0.03165784	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	3					18.99	18.99	3;4	0.00065753	12002	DP1134_1	93.909	71.434			0.32778	0.39545	NaN	1	0	Median	256110000	187230000	68876000	385	199	356	611;612;613	1175;1176;1177	1176	187	3	9606
HMFHVAWVDPEDPYKGYR	1	1	Unmodified	2246.0367	0.036743217	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					19.698	19.698	4	1.2243000000000001E-45	13262	DP1134_1	171.11	159.69			0.3848	0.46424	NaN	1	0	Median	66987000	49273000	17714000	386	199	356	614	1178;1179;1180	1178		3	9606
HNFCFMEMNTR	0	1	Oxidation (M)	1501.5901	0.59007391	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		2				17.509	17.509	2;3	0.00069187	10915	DP1134_2	89.266	83.129			0.59925	0.70042	12.603	2	0	Median	95987000	59440000	36547000	387	241	357	615;616	1181;1182;1183;1184;1185	1181	243;244	5	9606
HNFCFMEMNTR	0	1	2 Oxidation (M)	1517.585	0.58498853	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	2	0	3	0			1			16.105	16.105	3	0.033851	8117	DP1134_3	49.081	40.482			0.67614	0.82653	NaN	1	0	Median	20226000	11837000	8388900	388	241	357	617	1186	1186	243;244	0	9606
HPYFYAPELLFFAK	1	0	Unmodified	1741.8868	0.88681473	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	0	2	0		1				23.207	23.207	2	6.5694E-13	19674	DP1134_2	143.5	53.675		+	NaN	NaN	NaN	0	0	Median	2291500	2291500	0	389	12	358	618	1187;1188	1188		2	9606
HPYFYAPELLYYANK	1	0	Unmodified	1887.9196	0.91957142	13	CON__P02769			yes	yes	0	0	0	2.2	0.748	1	2	2			21.42	21.42	2;3	0	17119	DP1134_2	284.47	212.18		+	NaN	NaN	NaN	0	0	Median	35978000	35978000	0	390	13	359	619;620;621;622;623	1189;1190;1191;1192;1193;1194	1190		6	
HTGPNSPDTANDGFVR	0	1	Unmodified	1683.7601	0.76011066	113;145	P31943;P55795	HNRNPH1;HNRNPH2	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2	no	no	0	0	0	3.5	0.5			1	1		15.483	15.483	3	0	7061	DP1134_3	254.72	228.06			1.9353	2.1713	29.186	2	0	Median	186800000	58421000	128380000	391	113;145	360	624;625	1195;1196;1197;1198;1199	1196		5	9606
HTPLVEFEEEESDKR	1	1	Unmodified	1843.8588	0.85882166	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	1	2	0		1				17.608	17.608	3	3.2429E-203	11037	DP1134_2	249.33	218.01			0.40887	0.41765	NaN	1	0	Median	113580000	79572000	34006000	392	241	361	626	1200;1201;1202;1203;1204	1202		5	9606
HTPLVEFEEEESDKRESE	1	1	Unmodified	2188.976	0.97603626	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	2	3.2	1.17		2	1	1	1	17.739	17.739	2;3	0	10703	DP1134_3	281.99	269.93			0.39479	0.41755	13.77	4	0	Median	851180000	600090000	251090000	393	241	362	627;628;629;630;631	1205;1206;1207;1208;1209;1210;1211;1212;1213;1214;1215;1216;1217;1218	1212		14	9606
HVEVQVFGDHHGNAVYLFER	0	1	Unmodified	2352.14	0.13996274	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		2				19.411	19.411	3;4	2.8024000000000003E-131	14078	DP1134_2	216.35	188			0.54589	0.63805	5.8283	2	0	Median	475460000	307140000	168330000	394	241	363	632;633	1219;1220;1221;1222;1223;1224;1225;1226;1227;1228;1229	1227		11	9606
HVINFDLPSDIEEYVHR	0	1	Unmodified	2082.0171	0.017053633	27	O00571;O15523	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	yes	no	0	0	0	2	0		1				21.348	21.348	3	2.1513E-21	16964	DP1134_2	146.86	131.22			2.3594	2.7577	NaN	1	0	Median	18857000	5511900	13345000	395	27	364	634	1230;1231;1232	1230		3	9606
HVLHVQLNRPNK	1	1	Unmodified	1453.8266	0.82661451	197	Q13011	ECH1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	yes	yes	0	0	1	4	0				1		14.913	14.913	4	0.0001221	6333	DP1134_4	90.108	67.787			0.4218	0.45323	NaN	1	0	Median	7411400	5114600	2296700	396	197	365	635	1233;1234;1235	1233		3	9606
HVLHVQLNRPNKR	1	2	Unmodified	1609.9277	0.92772554	197	Q13011	ECH1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	yes	yes	0	0	2	4	0				1		14.63	14.63	4	0.011448	6048	DP1134_4	58.676	46.322			0.55279	0.57518	NaN	1	0	Median	14663000	8513800	6148800	397	197	366	636	1236;1237;1238	1238		3	9606
HVVFIAQR	0	1	Unmodified	968.55558	0.55558461	154	P62081	RPS7	40S ribosomal protein S7	yes	yes	0	0	0	4	0				1		15.93	15.93	2	0.014285	7988	DP1134_4	96.048	79.272			0.68903	0.70951	NaN	1	0	Median	7777100	4771700	3005300	398	154	367	637	1239	1239		1	9606
HWPFQVINDGDKPK	2	0	Unmodified	1679.842	0.8419898	74	P0DMV8;P0DMV9	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	yes	no	0	0	1	2	0		1				18.614	18.614	3	2.5066E-111	12816	DP1134_2	214.61	185.97			0.61867	0.61785	NaN	1	0	Median	30793000	18958000	11835000	399	74	368	638	1240;1241;1242	1241		3	9606
HYAHTDCPGHADYVK	1	0	Unmodified	1769.758	0.75800217	138	P49411	TUFM	Elongation factor Tu, mitochondrial	yes	yes	0	0	0	3	0			1			13.888	13.888	4	0.0062846	4928	DP1134_3	54.95	43.242			0.45133	0.55106	NaN	1	0	Median	6047400	4328000	1719500	400	138	369	639	1243	1243		1	9606
HYFIEVNSR	0	1	Unmodified	1163.5724	0.57235688	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.33	0.471	2	1				17.219	17.219	2;3	1.494E-61	9179	DP1134_1	219.72	147.58			0.67936	0.83915	8.2365	2	0	Median	954750000	583120000	371640000	401	78	370	640;641;642	1244;1245;1246;1247;1248;1249;1250;1251;1252	1245		9	9606
IAAGEKIPLSQEEITLQGHAFEAR	1	1	Unmodified	2607.3657	0.36566515	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	1	2	0		2				19.211	19.211	3;4	2.459E-06	13544	DP1134_2	72.676	45.762			0.44613	0.45571	5.8343	2	0	Median	916900000	609150000	307740000	402	241	371	643;644	1253;1254;1255;1256	1253		4	9606
IAPYVAHNFSK	1	0	Unmodified	1245.6506	0.6506072	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.33	0.471	2	1				16.309	16.309	2;3	5.2003E-51	7710	DP1134_1	157.34	130.3			0.48396	0.58481	14.275	3	0	Median	977050000	646550000	330500000	403	78	372	645;646;647	1257;1258;1259;1260;1261	1259		4	9606
IAQPGDHVSVTGIFLPILR	0	1	Unmodified	2032.1469	0.14694559	116	P33993	MCM7	DNA replication licensing factor MCM7	yes	yes	0	0	0	2	0		1				22.373	22.373	3	2.7265E-05	18411	DP1134_2	113.81	113.81			0.47236	0.5521	NaN	1	0	Median	5344300	3359800	1984500	404	116	373	648	1262;1263	1262		2	9606
IASSIVAQTAGIPTLPWSGSGLR	0	1	Unmodified	2281.243	0.24303082	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1.75	0.829	2	1	1			22.42	22.42	2;3	0	17182	DP1134_1	390.71	365.52			0.42343	0.52303	14.845	2	0	Median	176450000	125540000	50914000	405	199	374	649;650;651;652	1264;1265;1266;1267;1268;1269;1270;1271;1272;1273	1264		10	9606
IAWDDEETRDGFR	0	2	Unmodified	1608.7168	0.71684887	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	1	2	0		1				18.411	18.411	3	0.00014241	12308	DP1134_2	117.09	98.033			0.49324	0.48605	NaN	1	0	Median	135830000	90668000	45157000	406	56	375	653	1274	1274		1	9606
IDLEALMLCSDLDLR	0	1	Oxidation (M)	1791.8747	0.87467142	213	Q495M9	USH1G	Usher syndrome type-1G protein	yes	yes	0	1	0	1	0	1					24.17	24.17	2	0.016478	19749	DP1134_1	57.174	28.218			0.84749	1.0468	NaN	1	0	Median	4142800	1987400	2155400	407	213	376	654	1275	1275	219	0	9606
IDTGWLDR	0	1	Unmodified	974.48214	0.48214489	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					19.385	19.385	2	1.2929E-11	12654	DP1134_1	155	57.929			0.57876	0.71488	NaN	1	0	Median	99608000	63564000	36045000	408	199	377	655	1276;1277	1276		2	9606
IEDVTPIPSDSTR	0	1	Unmodified	1428.7096	0.70963822	158	P62263	RPS14	40S ribosomal protein S14	yes	yes	0	0	0	5	0					1	17.352	17.352	2	0.0016555	9913	DP1134_5	89.403	53.739			0.35122	0.36276	NaN	1	0	Median	30225000	21610000	8614400	409	158	378	656	1278	1278		0	9606
IEDVTPIPSDSTRR	0	2	Unmodified	1584.8107	0.81074925	158	P62263	RPS14	40S ribosomal protein S14	yes	yes	0	0	1	5	0					1	16.46	16.46	3	0.0016072	8308	DP1134_5	113.61	81.782			NaN	NaN	NaN	0	0	Median	8325200	8325200	0	410	158	379	657	1279;1280	1279		2	9606
IEISELNR	0	1	Unmodified	972.52401	0.52400971	51;18	CON__P35908v2;CON__P35908;P35908;P04264;CON__P04264	KRT2;KRT1	Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1	no	no	0	0	0	2	0		1				17.609	17.609	2	1.3342E-09	11117	DP1134_2	152.63	29.843		+	NaN	NaN	NaN	0	0	Median	170500000	170500000	0	411	18;51	380	658	1281	1281		1	9606
IETIEVMEDR	0	1	Oxidation (M)	1249.586	0.58601761	141	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	yes	yes	0	1	0	3.5	0.5			1	1		16.781	16.781	2	7.643E-05	9267	DP1134_3	138.98	93.894			3.3174	4.0553	NaN	1	0	Median	159580000	34759000	124820000	412	141	381	659;660	1282;1283;1284;1285;1286	1282	131	5	9606
IFAPNHVVAK	1	0	Unmodified	1094.6237	0.62366417	190	Q02543	RPL18A	60S ribosomal protein L18a	yes	yes	0	0	0	4	0				1		15.552	15.552	3	0.018648	7297	DP1134_4	59.931	59.931			0.35585	0.41337	NaN	1	0	Median	20694000	14715000	5978800	413	190	382	661	1287;1288	1288		2	9606
IFGYPVGIVGNNGVLFSESAK	1	0	Unmodified	2167.1314	0.13135511	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.5	0.5			2	2		22.758	22.758	2;3	8.2824E-281	18517	DP1134_3	261.45	247.7			0.4582	0.54569	7.5332	2	0	Median	69866000	47704000	22162000	414	251	383	662;663;664;665	1289;1290;1291;1292;1293;1294;1295;1296;1297;1298	1290		10	9606
IFGYPVGIVGNNGVLFSESAKK	2	0	Unmodified	2295.2263	0.22631813	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			1			21.433	21.433	3	2.209E-212	16549	DP1134_3	246.48	203.95			NaN	NaN	NaN	0	0	Median	17155000	0	17155000	415	251	384	666	1299	1299		1	9606
IGAEVYHNLK	1	0	Unmodified	1142.6084	0.60840804	61	P06733	ENO1	Alpha-enolase	yes	yes	0	0	0	3	0			2			15.851	15.851	2;3	0.0055006	7748	DP1134_3	89.886	33.452			NaN	NaN	NaN	0	0	Median	10785000	10785000	0	416	61	385	667;668	1300;1301	1301		2	9606
IGEEEIQKPEEK	2	0	Unmodified	1427.7144	0.71438925	212	Q15459	SF3A1	Splicing factor 3A subunit 1	yes	yes	0	0	1	2	0		1				14.906	14.906	3	8.7774E-16	6948	DP1134_2	150.09	116.78			0.38277	0.38774	NaN	1	0	Median	13362000	9407700	3954000	417	212	386	669	1302;1303	1303		2	9606
IGGIGTVPVGR	0	1	Unmodified	1024.6029	0.60292873	177	P68104;Q5VTE0;Q05639	EEF1A1;EEF1A1P5;EEF1A2	Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2	yes	no	0	0	0	3.5	0.5			1	1		17.501	17.501	2	5.3292E-08	10379	DP1134_3	141.52	81.043			0.36925	0.41428	23.112	2	0	Median	170700000	119720000	50978000	418	177	387	670;671	1304;1305;1306;1307	1304		4	9606
IGLAEEIR	0	1	Unmodified	899.50763	0.50763136	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					17.994	17.994	2	0.013344	10482	DP1134_1	120.49	9.8552			NaN	NaN	NaN	0	0	Median	101720000	101720000	0	419	199	388	672;673	1308;1309	1309		2	9606
IGLLDPR	0	1	Unmodified	782.46504	0.46503826	212	Q15459	SF3A1	Splicing factor 3A subunit 1	yes	yes	0	0	0	2	0		1				18.611	18.611	2	0.01668	12576	DP1134_2	94.669	46.427			0.53272	0.62266	NaN	1	0	Median	16056000	10959000	5097400	420	212	389	674	1310	1310		1	9606
IGSFGPGEDLLYLR	0	1	Unmodified	1535.7984	0.79839365	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	1					22.152	22.152	2	0.0018312	16824	DP1134_1	114.86	61.651			NaN	NaN	NaN	0	0	Median	12577000	12577000	0	421	28	390	675	1311	1311		1	9606
IGSFGPQEDLLFLR	0	1	Unmodified	1590.8406	0.84059282	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	2	0.816	1	1	1			22.8	22.8	2	1.854E-201	17649	DP1134_1	242.97	208.76			0.54229	0.6516	1.965	2	0	Median	1016499999.9999999	656830000	359720000	422	199	391	676;677;678	1312;1313;1314;1315;1316;1317;1318;1319;1320;1321;1322;1323;1324;1325;1326;1327	1315		16	9606
IGYPVMIK	1	0	Oxidation (M)	935.51502	0.51502492	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		1				17.911	17.911	2	0.02608	11465	DP1134_2	58.167	40.782			0.49097	0.59924	NaN	1	0	Median	96793000	64464000	32329000	423	241	392	679	1328	1328	245	0	9606
IHFPLATYAPVISAEK	1	0	Unmodified	1755.956	0.95595693	178;246	P68363;P68366;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q6PEY2	TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain	no	no	0	0	0	3	0			1			20.627	20.627	3	0.00047511	15041	DP1134_3	111.81	93.471			0.41355	0.50494	NaN	1	0	Median	71022000	50263000	20759000	424	178;246	393	680	1329;1330;1331;1332;1333	1331		5	9606
IHNANPELTDGQIQAMLR	0	1	Oxidation (M)	2036.0109	0.010922397	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					17.802	17.802	3	0.00038207	10279	DP1134_1	98.552	98.552			0.51073	0.63086	NaN	1	0	Median	425930000	280820000	145110000	425	199	394	681	1334;1335	1334	188	2	9606
IIAATIENAQPILQIDNAR	0	1	Unmodified	2063.1375	0.13750312	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	0	3	0			1			20.824	20.824	2	5.5823E-135	15729	DP1134_3	217.91	116.02		+	NaN	NaN	NaN	0	0	Median	98631000	98631000	0	426	14	395	682	1336	1336		1	9606
IIAPPER	0	1	Unmodified	794.46504	0.46503826	146;175	P60709;P63267;P68133;P68032;P62736;Q562R1;P63261	ACTB;ACTG2;ACTA1;ACTC1;ACTA2;ACTBL2;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	0	3	0			1			15.244	15.244	2	7.1636E-09	6789	DP1134_3	153.88	53.612			NaN	NaN	NaN	0	0	Median	28950000	28950000	0	427	146;175	396	683	1337	1337		1	9606
IIEEAPAPGIK	1	0	Unmodified	1136.6441	0.64412484	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0.816		1	1	1		16.725	16.725	2	0.0045042	9815	DP1134_2	122.13	122.13			0.32653	0.39861	6.8348	2	0	Median	1908999999.9999998	1390500000	518440000	428	241	397	684;685;686	1338;1339;1340;1341;1342;1343;1344	1340		7	9606
IIEEAPATIATPAVFEHMEQCAVK	1	0	Unmodified	2654.3084	0.30840955	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					21.064	21.064	3	0.027082	15230	DP1134_1	49.613	16.816			NaN	NaN	NaN	0	0	Median	61331000	61331000	0	429	199	398	687	1345	1345		1	9606
IIEFVPTK	1	0	Unmodified	945.55352	0.55351892	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					18.689	18.689	1;2	1.7209E-06	11599	DP1134_1	143.11	66.26			0.49136	0.59376	NaN	1	0	Median	425020000	294320000	130700000	430	199	399	688;689	1346;1347	1346		2	9606
IINEPTAAAIAYGLDR	0	1	Unmodified	1686.8941	0.89408495	74;87	P0DMV8;P0DMV9;P17066	HSPA1A;HSPA1B;HSPA6	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6	no	no	0	0	0	2	0		2				20.762	20.762	2;3	6.2603E-49	16038	DP1134_2	174.73	66.261			0.79624	0.93066	8.7517	2	0	Median	105430000	55961000	49466000	431	74;87	400	690;691	1348;1349;1350;1351;1352	1349		4	9606
IIQQAGQVWFPDSAFK	1	0	Unmodified	1833.9414	0.94136949	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1.5	0.5	1	1				21.574	21.574	2	7.0963E-290	15845	DP1134_1	273.24	231			0.53918	0.65479	13.991	2	0	Median	206920000	144490000	62428000	432	199	401	692;693	1353;1354;1355;1356;1357;1358;1359;1360;1361	1354		9	9606
IITHPNFNGNTLDNDIMLIK	1	0	Oxidation (M)	2298.1678	0.16781697	7	CON__P00761			yes	yes	0	1	0	2.8	1.47	1	2		1	1	20.324	20.324	2;3	2.3057999999999998E-117	14462	DP1134_5	211.67	149.47		+	NaN	NaN	NaN	0	0	Median	1606999999.9999998	1606999999.9999998	0	433	7	402	694;695;696;697;698	1362;1363;1364;1365;1366;1367	1367	2	6	
IITHPNFNGNTLDNDIMLIK	1	0	Unmodified	2282.1729	0.17290235	7	CON__P00761			yes	yes	0	0	0	3	1		1		1		20.853	20.853	2;3	3.2892E-138	16304	DP1134_2	207.08	158.42		+	NaN	NaN	NaN	0	0	Median	396000000	396000000	0	434	7	402	699;700	1368;1369	1368		2	
IKFEMEQNLR	1	1	Oxidation (M)	1322.6653	0.66527099	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	1	1	1	0	1					16.224	16.224	2	0.00030136	7650	DP1134_1	133.13	79.359		+	NaN	NaN	NaN	0	0	Median	40354000	40354000	0	435	17	403	701	1370	1370	22	1	9606
IKFPLPHR	1	1	Unmodified	1006.6076	0.60762018	190	Q02543	RPL18A	60S ribosomal protein L18a	yes	yes	0	0	1	4	0				1		16.885	16.885	3	0.024737	9420	DP1134_4	84.916	73.405			0.58752	0.63129	NaN	1	0	Median	16067000	11149000	4917900	436	190	404	702	1371	1371		1	9606
IKYPENFFLLR	1	1	Unmodified	1438.7973	0.79727144	121	P36873;P62136;P62140	PPP1CC;PPP1CA;PPP1CB	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit	yes	no	0	0	1	3	0			2			20.911	20.911	2;3	0.0022476	15874	DP1134_3	128.6	68.671			NaN	NaN	NaN	0	0	Median	61507000	0	61507000	437	121	405	703;704	1372;1373	1373		2	9606
ILMEHIHK	1	0	Unmodified	1019.5586	0.55862107	184	P84098	RPL19	60S ribosomal protein L19	yes	yes	0	0	0	4	0				1		15.003	15.003	3	0.016615	6529	DP1134_4	60.478	19.048			1.0776	1.2518	NaN	1	0	Median	4382800	2170200	2212600	438	184	406	705	1374	1374		1	9606
ILNEMRDQYEQMAEK	1	1	2 Oxidation (M)	1928.8608	0.86081227	14	CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	2	1	3	0			2			15.426	15.426	2;3	0.006706	6954	DP1134_3	107.09	75.492		+	NaN	NaN	NaN	0	0	Median	82182000	82182000	0	439	14	407	706;707	1375;1376	1376	14;15	2	9606
ILNVPQELYEK	1	0	Unmodified	1344.7289	0.7289171	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					19.491	19.491	2	0.00010723	12949	DP1134_1	133.23	98.84			0.56346	0.68088	NaN	1	0	Median	898830000	580220000	318610000	440	199	408	708	1377;1378;1379	1377		3	9606
ILSGVVTK	1	0	Unmodified	815.51165	0.5116541	161	P62280	RPS11	40S ribosomal protein S11	yes	yes	0	0	0	4	0				1		15.989	15.989	2	6.468E-07	7998	DP1134_4	140.98	46.322			0.75499	0.87703	NaN	1	0	Median	56799000	32238000	24561000	441	161	409	709	1380	1380		0	9606
IMDQAITVGAPVIGLNDSGGAR	0	1	Oxidation (M)	2170.1052	0.10521671	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3	0			1			20.131	20.131	2	2.3931E-05	14547	DP1134_3	100.41	36.65			NaN	NaN	NaN	0	0	Median	0	0	0	442	57	410	710	1381	1381	63	1	9606
IMLPWDPTGK	1	0	Oxidation (M)	1172.59	0.58998078	102	P23396	RPS3	40S ribosomal protein S3	yes	yes	0	1	0	4	0				1		20.934	20.934	2	0.00044981	15986	DP1134_4	134.77	91.683			0.3496	0.4061	NaN	1	0	Median	10294000	6577600	3716700	443	102	411	711	1382	1382	106	1	9606
IMNTFSVVPSPK	1	0	Oxidation (M)	1334.6904	0.69042311	66;179;201	P07437;P68371;P04350;Q13509	TUBB;TUBB4B;TUBB4A;TUBB3	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain	no	no	0	1	0	3	0			1			18.325	18.325	2	4.5151E-10	11814	DP1134_3	141.88	141.88			0.47572	0.58084	NaN	1	0	Median	84488000	55960000	28528000	444	66;179;201	412	712	1383;1384;1385	1384	72	3	9606
IMNTFSVVPSPK	1	0	Unmodified	1318.6955	0.69550848	66;179;201	P07437;P68371;P04350;Q13509	TUBB;TUBB4B;TUBB4A;TUBB3	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain	no	no	0	0	0	3	0			1			19.228	19.228	2	1.3601E-15	13293	DP1134_3	148.56	94.491			0.43464	0.53068	NaN	1	0	Median	33553000	23236000	10316000	445	66;179;201	412	713	1386;1387;1388;1389	1388		4	9606
INSWVESQTNEK	1	0	Unmodified	1433.6787	0.67867245	135;110	P48594;P29508	SERPINB4;SERPINB3	Serpin B4;Serpin B3	no	no	0	0	0	4	0				1		16.961	16.961	2	4.0290999999999995E-275	9608	DP1134_4	273.79	201.55			NaN	NaN	NaN	0	0	Median	68784000	68784000	0	446	135;110	413	714	1390;1391	1390		2	9606
INTQWLLTSGTTEANAWK	1	0	Unmodified	2033.0218	0.02180466	25	CON__Streptavidin			yes	yes	0	0	0	3.89	1.45	1	1	1	1	5	23.672	23.672	2;3	0	17580	DP1134_2	361.84	272.54		+	NaN	NaN	NaN	0	0	Median	7367499999.999999	7367499999.999999	0	447	25	414	715;716;717;718;719;720;721;722;723	1392;1393;1394;1395;1396;1397;1398;1399;1400;1401;1402;1403;1404;1405;1406;1407	1393		16	
IPIHNEDITYDELVLMMQR	0	1	2 Oxidation (M)	2361.1345	0.13446793	233	Q92734	TFG	Protein TFG	yes	yes	0	2	0	3	0			1			19.828	19.828	3	0.025126	14072	DP1134_3	57.414	34.367			NaN	NaN	NaN	0	0	Median	46370000	0	46370000	448	233	415	724	1408	1408	233;234	1	9606
IPIHNEDITYDELVLMMQR	0	1	Oxidation (M)	2345.1396	0.13955331	233	Q92734	TFG	Protein TFG	yes	yes	0	1	0	3	0			1			20.875	20.875	3	0.0029839	15756	DP1134_3	110.56	78.408			NaN	NaN	NaN	0	0	Median	10278000	0	10278000	449	233	415	725	1409	1409	233;234	1	9606
IPLSQEEITLQGHAFEAR	0	1	Unmodified	2038.0484	0.048353761	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2.33	0.471		2	1			19.442	19.442	2;3	9.314299999999999E-102	13991	DP1134_2	204.9	204.9			0.49243	0.58861	5.5132	2	0	Median	790690000	503150000	287530000	450	241	416	726;727;728	1410;1411;1412;1413;1414;1415;1416;1417;1418	1411		9	9606
IPVQAVWAGWGHASENPK	1	0	Unmodified	1945.9799	0.97988027	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					19.989	19.989	3	1.5386000000000001E-69	13570	DP1134_1	183.75	159.29			0.32654	0.39458	NaN	1	0	Median	130660000	96077000	34584000	451	28;199	417	729	1419	1419		1	9606
IPVQAVWAGWGHASENPKLPELLLK	2	0	Unmodified	2752.5065	0.50645615	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					22.087	22.087	3;4	6.7764E-09	16667	DP1134_1	103.28	82.109			0.33392	0.36625	NaN	1	0	Median	54118000	44592000	9526200	452	199	418	730;731	1420;1421;1422	1420		3	9606
IPWFQYPIIYDIR	0	1	Unmodified	1722.9134	0.91336383	243	Q99623	PHB2	Prohibitin-2	yes	yes	0	0	0	4	0				1		24.264	24.264	2	4.5336000000000004E-24	20841	DP1134_4	164.33	124.49			0.37551	0.38667	NaN	1	0	Median	8522200	6232500	2289800	453	243	419	732	1423;1424;1425;1426;1427;1428	1424		6	9606
IQDKEGIPPDQQR	1	1	Unmodified	1522.774	0.77396981	73	P62987;P62979;P0CG47;P0CG48;A0A2R8Y422	UBA52;RPS27A;UBB;UBC	Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin	yes	no	0	0	1	3.25	1.48	1		1	1	1	14.129	14.129	3	6.782E-05	4843	DP1134_5	120.6	98.8			0.25649	0.28605	122.77	4	0	Median	29266000	23595000	5671300	454	73	420	733;734;735;736	1429;1430;1431;1432;1433;1434;1435;1436;1437	1435		9	9606
IQHMQPSPQACNSAMK	1	0	Oxidation (M)	1842.8175	0.81750766	250	Q9H1E1	RNASE7	Ribonuclease 7	yes	yes	0	1	0	5	0					1	13.956	13.956	3	0.0016586	4634	DP1134_5	103.04	66.596			NaN	NaN	NaN	0	0	Median	2338500	2338500	0	455	250	421	737	1438;1439	1439	263	2	9606
IQSTALRGEKLHR	1	2	Unmodified	1507.8583	0.85830857	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	2	1	0	1					14.395	14.395	4	0.033166	4629	DP1134_1	28.283	7.4259			0.88549	0.98651	NaN	1	0	Median	1998300	1222700	775550	456	199	422	738	1440	1440		0	9606
IQVRLGEHNIDVLEGNEQFINAAK	1	1	Unmodified	2706.4089	0.40892695	7	CON__P00761			yes	yes	0	0	1	5	0					1	20.142	20.142	3	0.013479	14263	DP1134_5	80.844	50.62		+	NaN	NaN	NaN	0	0	Median	5954000	5954000	0	457	7	423	739	1441	1441		1	
IRDWYQR	0	2	Unmodified	1035.525	0.52501276	14;8;19	CON__P02533;P02533;CON__Q04695;Q04695;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT14;KRT17;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	1	1	0	1					16.543	16.543	3	0.02879	8038	DP1134_1	87.754	38.694		+	NaN	NaN	NaN	0	0	Median	0	0	0	458	8;19;14	424	740	1442	1442		1	9606
IRLENEIQTYR	0	2	Unmodified	1433.7627	0.76267685	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	1	2	1	1		1			17.663	17.663	3	0.00033446	10748	DP1134_3	129.34	63.501		+	NaN	NaN	NaN	0	0	Median	565310000	565310000	0	459	15	425	741;742	1443;1444;1445;1446	1446		4	9606
ISEQFTAMFR	0	1	Oxidation (M)	1244.586	0.58595803	66;179;201	P07437;P68371;P04350;Q13509	TUBB;TUBB4B;TUBB4A;TUBB3	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain	no	no	0	1	0	3	0			1			18.734	18.734	2	0.0087858	12411	DP1134_3	135.71	73.165			NaN	NaN	NaN	0	0	Median	0	0	0	460	66;179;201	426	743	1447	1447	73	1	9606
ISGLIYEETR	0	1	Unmodified	1179.6136	0.61355299	167	P62805	HIST1H4A	Histone H4	yes	yes	0	0	0	3.67	1.25		1		1	1	18.411	18.411	2	3.6322E-76	11969	DP1134_4	211.45	131.28			NaN	NaN	NaN	0	0	Median	11035000	11035000	0	461	167	427	744;745;746	1448;1449;1450	1449		3	9606
ISLGLPVGAVINCADNTGAK	1	0	Unmodified	1969.0303	0.030260856	168	P62829	RPL23	60S ribosomal protein L23	yes	yes	0	0	0	5	0					1	21.273	21.273	2	1.8801E-10	15939	DP1134_5	100.11	100.11			0.49764	0.58065	NaN	1	0	Median	17231000	10302000	6929700	462	168	428	747	1451	1451		0	9606
ISLLLDPGSFVESDMFVEHR	0	1	Oxidation (M)	2306.1253	0.12528345	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3.5	0.5			1	1		22.484	22.484	3	3.1589E-13	18279	DP1134_4	144.4	123.45			0.3933	0.48078	NaN	1	0	Median	18540000	13770000	4770400	463	57	429	748;749	1452;1453;1454;1455;1456;1457;1458;1459	1459	64	8	9606
ISLPLPNFSSLNLR	0	1	Unmodified	1569.8879	0.88787736	69	P08670	VIM	Vimentin	yes	yes	0	0	0	3	0			1			23.004	23.004	2	2.3598E-20	18801	DP1134_3	150.04	150.04			0.4856	0.59362	NaN	1	0	Median	5857200	4296600	1560700	464	69	430	750	1460;1461;1462	1460		3	9606
ISSLLEEQFQQGK	1	0	Unmodified	1505.7726	0.77257283	155	P62241	RPS8	40S ribosomal protein S8	yes	yes	0	0	0	4	0				1		19.35	19.35	2	2.8398E-30	13529	DP1134_4	177.78	121.35			NaN	NaN	NaN	0	0	Median	0	0	0	465	155	431	751	1463	1463		1	9606
ISSVLAGGSCR	0	1	Unmodified	1105.555	0.55499226	14;8	CON__P02533;P02533;CON__P08779;P08779	KRT14;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16	no	no	0	0	0	4.5	0.5				1	1	15.935	15.935	2	8.3839E-06	7982	DP1134_4	138.66	69.061		+	0.67391	0.69605	NaN	1	0	Median	17357000	13222000	4134600	466	8;14	432	752;753	1464;1465;1466;1467	1465		4	9606
ISVMGGEQAANVLATITK	1	0	Oxidation (M)	1817.9557	0.95569893	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3	0			1			20.911	20.911	2	1.1892E-161	15737	DP1134_3	225.21	167.98			0.64297	0.78505	NaN	1	0	Median	736660000	457010000	279660000	467	251	433	754	1468;1469;1470;1471	1469	264	4	9606
ISVMGGEQAANVLATITK	1	0	Unmodified	1801.9608	0.96078431	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			2			21.897	21.897	2;3	4.5806E-56	17242	DP1134_3	178.67	120.39			0.54431	0.66459	4.0032	2	0	Median	224130000	140540000	83594000	468	251	433	755;756	1472;1473;1474;1475;1476;1477;1478;1479	1473		7	9606
ISVYYNEATGGK	1	0	Unmodified	1300.6299	0.62993134	66	P07437	TUBB	Tubulin beta chain	yes	yes	0	0	0	3	0			1			17.197	17.197	2	0.01844	9990	DP1134_3	102.52	56.117			NaN	NaN	NaN	0	0	Median	43724000	0	43724000	469	66	434	757	1480	1480		1	9606
ITDIIGKEEGIGPENLR	1	1	Unmodified	1852.9894	0.9894419	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					18.89	18.89	2;3	0	11974	DP1134_1	305.69	236.04			0.4803	0.57946	5.0012	2	0	Median	561100000	371820000	189290000	470	199	435	758;759	1481;1482;1483;1484;1485	1484		5	9606
ITGEAFVQFASQELAEK	1	0	Unmodified	1866.9363	0.9363437	143	P52597	HNRNPF	Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed	yes	yes	0	0	0	3	0			1			22.688	22.688	2	4.1344E-56	18466	DP1134_3	180.3	146.98			1.2388	1.5126	NaN	1	0	Median	9425300	4594200	4831200	471	143	436	760	1486;1487;1488;1489;1490	1487		5	9606
IVEPYIAWGYPNLK	1	0	Unmodified	1661.8817	0.88172935	91	P18124	RPL7	60S ribosomal protein L7	yes	yes	0	0	0	4	0				1		21.954	21.954	2	3.7433E-05	17514	DP1134_4	123.88	49.721			NaN	NaN	NaN	0	0	Median	10669000	10669000	0	472	91	437	761	1491	1491		1	9606
IVEQDTMPPK	1	0	Oxidation (M)	1172.5747	0.57472465	27	O00571;O15523	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	yes	no	0	1	0	2	0		1				14.318	14.318	2	0.030798	6024	DP1134_2	96.331	57.078			1.7705	2.1609	NaN	1	0	Median	6388100	2429800	3958300	473	27	438	762	1492	1492	30	1	9606
IVGDLAQFMVQNGLSR	0	1	Unmodified	1746.9087	0.90868916	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.25	0.968	2	3	2	1		22.418	22.418	2;3	0	18492	DP1134_2	301.35	301.35			0.66203	0.79993	18.87	6	0	Median	542510000	319000000	223520000	474	78	439	763;764;765;766;767;768;769;770	1493;1494;1495;1496;1497;1498;1499;1500;1501;1502;1503;1504;1505;1506;1507;1508;1509;1510;1511;1512;1513;1514	1503		22	9606
IVGDLAQFMVQNGLSR	0	1	Oxidation (M)	1762.9036	0.90360378	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1	0	1					20.377	20.377	2	0.008999	14437	DP1134_1	61.419	61.419			0.60718	0.74999	NaN	1	0	Median	326640000	211880000	114760000	475	78	439	771	1515	1515	93	0	9606
IVQAEGEAEAAK	1	0	Unmodified	1214.6143	0.61428128	243	Q99623	PHB2	Prohibitin-2	yes	yes	0	0	0	4	0				1		14.434	14.434	2	7.07E-32	5709	DP1134_4	166.34	113.4			0.53294	0.61909	NaN	1	0	Median	44998000	28909000	16089000	476	243	440	772	1516;1517;1518	1516		3	9606
IVSGKDYNVTANSK	2	0	Unmodified	1494.7678	0.7678218	43	P00338	LDHA	L-lactate dehydrogenase A chain	yes	yes	0	0	1	4	0				1		14.676	14.676	3	0.00012527	5969	DP1134_4	122.66	89.803			NaN	NaN	NaN	0	0	Median	470690	470690	0	477	43	441	773	1519	1519		1	9606
IYAEDPSNNFMPVAGPLVHLSTPR	0	1	Unmodified	2624.3057	0.30570743	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2.5	0.5		1	1			21.278	21.278	3	2.1846E-15	16820	DP1134_2	125.31	112.4			0.2466	0.28823	NaN	1	0	Median	127160000	102830000	24328000	478	241	442	774;775	1520;1521;1522;1523;1524;1525;1526;1527;1528	1522		9	9606
IYAEDPSNNFMPVAGPLVHLSTPR	0	1	Oxidation (M)	2640.3006	0.30062206	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	3	0			1			20.227	20.227	3	0.00067695	14685	DP1134_3	90.978	56.829			NaN	NaN	NaN	0	0	Median	28382000	28382000	0	479	241	442	776	1529;1530	1529	246	2	9606
IYLTADNLVLNLQDESFTR	0	1	Unmodified	2224.1376	0.1375627	243	Q99623	PHB2	Prohibitin-2	yes	yes	0	0	0	4	0				1		23.107	23.107	2	4.0719E-26	19168	DP1134_4	205.96	141.84			NaN	NaN	NaN	0	0	Median	0	0	0	480	243	443	777	1531	1531		1	9606
IYVLLRR	0	2	Unmodified	931.59672	0.59672114	183	P84090	ERH	Enhancer of rudimentary homolog	yes	yes	0	0	1	5	0					1	17.436	17.436	3	0.033601	9920	DP1134_5	66.994	22.383			NaN	NaN	NaN	0	0	Median	0	0	0	481	183	444	778	1532	1532		1	9606
KAEVEGKDLPEHAVLK	3	0	Unmodified	1761.9625	0.96249887	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	2	1.5	0.5	1	1				15.335	15.335	3	1.1964E-07	6087	DP1134_1	125.33	99.508			0.67237	0.73332	18.52	2	0	Median	42461000	23887000	18574000	482	186	445	779;780	1533;1534	1533		2	9606
KALSSMGANYSSYLAK	2	0	Unmodified	1689.8396	0.83960654	129	P45378	TNNT3	Troponin T, fast skeletal muscle	yes	yes	0	0	1	2	0		1				17.776	17.776	2	0.0062239	11383	DP1134_2	107.34	2.1403			NaN	NaN	NaN	0	0	Median	0	0	0	483	129	446	781	1535	1535		1	9606
KASGPPVSELITK	2	0	Unmodified	1325.7555	0.7554662	86	P16403;P10412;P16402	HIST1H1C;HIST1H1E;HIST1H1D	Histone H1.2;Histone H1.4;Histone H1.3	yes	no	0	0	1	4	0				2		16.771	16.771	2;3	3.2241E-07	9267	DP1134_4	132.14	94.952			NaN	NaN	NaN	0	0	Median	13188000	13188000	0	484	86	447	782;783	1536;1537;1538	1536		3	9606
KAVETAAAHGSKPNVYANR	2	1	Unmodified	1983.0286	0.028621372	100	P22735	TGM1	Protein-glutamine gamma-glutamyltransferase K	yes	yes	0	0	2	1.5	0.5	1	1				13.823	13.823	4	4.3525E-08	4080	DP1134_1	137.73	102.38			NaN	NaN	NaN	0	0	Median	3872500	3872500	0	485	100	448	784;785	1539;1540;1541	1539		3	9606
KAYGGAYDVMSSK	2	0	Oxidation (M)	1391.6391	0.63911582	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	1	3	0			1			14.62	14.62	3	0.0080054	5865	DP1134_3	56.29	46.757			0.47043	0.50448	NaN	1	0	Median	30082000	20118000	9963700	486	57	449	786	1542;1543	1542	65	2	9606
KAYVEANQMLGDLIK	2	0	Oxidation (M)	1707.8866	0.88655673	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	1	1	0	2					18.534	18.534	2;3	3.4743E-29	11293	DP1134_1	162.64	105.54			0.58921	0.64627	10.26	2	0	Median	182490000	115450000	67043000	487	78	450	787;788	1544;1545;1546;1547	1544	84	4	9606
KAYVEANQMLGDLIK	2	0	Unmodified	1691.8916	0.89164211	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1.5	0.5	1	1				20.178	20.178	2;3	0.0018226	13986	DP1134_1	50.874	37.128			0.56281	0.61731	NaN	1	0	Median	64815000	40120000	24695000	488	78	450	789;790	1548;1549	1548		2	9606
KDCEVVMMIGLPGAGK	2	0	2 Oxidation (M)	1735.8307	0.83069811	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	2	1	2	0		1				17.753	17.753	3	0.03395	11347	DP1134_2	45.883	28.602			NaN	NaN	NaN	0	0	Median	0	0	0	489	186	451	791	1550	1550	167;168	1	9606
KDLQNFLK	2	0	Unmodified	1004.5655	0.56548059	60	P06702	S100A9	Protein S100-A9	yes	yes	0	0	1	4.5	0.5				1	1	17.278	17.278	2	4.1361E-32	9759	DP1134_5	200.16	72.592			NaN	NaN	NaN	0	0	Median	112660000	112660000	0	490	60	452	792;793	1551;1552;1553	1552		3	9606
KDLQNFLKK	3	0	Unmodified	1132.6604	0.66044361	60	P06702	S100A9	Protein S100-A9	yes	yes	0	0	2	5	0					1	15.94	15.94	3	0.0031342	7568	DP1134_5	106.6	56.126			NaN	NaN	NaN	0	0	Median	26820000	26820000	0	491	60	453	794	1554	1554		1	9606
KESYSVYVYK	2	0	Unmodified	1264.634	0.63395408	36	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K	yes	no	0	0	1	5	0					1	16.631	16.631	2	1.092E-07	8621	DP1134_5	140.17	102.36			0.54586	0.58376	NaN	1	0	Median	308000000	199580000	108420000	492	36	454	795	1555	1555		1	9606
KFEEEGNPYYSSAR	1	1	Unmodified	1675.7478	0.74781464	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3.33	0.471			2	1		16.297	16.297	2;3	4.8528E-259	8495	DP1134_3	241.42	223.32			0.49076	0.56805	3.6023	2	0	Median	1877099999.9999998	1256800000	620260000	493	251	455	796;797;798	1556;1557;1558;1559;1560;1561;1562;1563;1564;1565;1566	1558		11	9606
KGHAVGDIPGVR	1	1	Unmodified	1204.6677	0.66765425	159	P62266	RPS23	40S ribosomal protein S23	yes	yes	0	0	1	5	0					1	15.01	15.01	3	3.0834E-05	6030	DP1134_5	115.92	115.92			0.47303	0.51566	NaN	1	0	Median	17771000	11774000	5996800	494	159	456	799	1567;1568;1569;1570;1571	1569		5	9606
KGTHFVQLCCQR	1	1	Unmodified	1532.734	0.73403603	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			2			15.426	15.426	3;4	8.3418E-33	6996	DP1134_3	168.85	142.3			0.57099	0.66091	0.24217	2	0	Median	367940000	234640000	133310000	495	251	457	800;801	1572;1573;1574;1575;1576;1577	1573		6	9606
KGTNYLADVFEK	2	0	Unmodified	1383.7034	0.70343063	111	P31151	S100A7	Protein S100-A7	yes	yes	0	0	1	5	0					1	19.486	19.486	2	1.0963E-23	12963	DP1134_5	161.93	85.83			NaN	NaN	NaN	0	0	Median	41098000	41098000	0	496	111	458	802	1578	1578		1	9606
KIAPYVAHNFSK	2	0	Unmodified	1373.7456	0.74557022	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1.5	0.5	1	1				15.721	15.721	3	0.00080069	7937	DP1134_2	80.871	62.539			0.45189	0.47036	9.2133	2	0	Median	300670000	196440000	104230000	497	78	459	803;804	1579;1580	1580		1	9606
KIDKYTEVLK	3	0	Unmodified	1235.7125	0.71253876	124	P40429	RPL13A	60S ribosomal protein L13a	yes	yes	0	0	2	4	0				1		15.817	15.817	3	0.015454	7746	DP1134_4	85.963	39.501			NaN	NaN	NaN	0	0	Median	12622000	12622000	0	498	124	460	805	1581	1581		1	9606
KIGEEEIQKPEEK	3	0	Unmodified	1555.8094	0.80935227	212	Q15459	SF3A1	Splicing factor 3A subunit 1	yes	yes	0	0	2	2	0		1				14.418	14.418	3	5.4711E-08	6139	DP1134_2	143.58	84.35			NaN	NaN	NaN	0	0	Median	13644000	13644000	0	499	212	461	806	1582	1582		1	9606
KIHNANPELTDGQIQAMLR	1	1	Oxidation (M)	2164.1059	0.10588542	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					17.193	17.193	3	0.00043399	9192	DP1134_1	91.926	72.201			0.54157	0.65338	NaN	1	0	Median	50065000	34413000	15652000	500	199	462	807	1583;1584;1585	1584	188	3	9606
KLAVNMVPFPR	1	1	Oxidation (M)	1286.7169	0.71691263	66;179;201	P07437;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;P04350;Q3ZCM7;A6NNZ2;Q13509	TUBB;TUBB6;TUBB1;TUBB4B;TUBB4A;TUBB8;TUBB3	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-3 chain	no	no	0	1	1	3	0			1			17.824	17.824	3	0.0095322	11015	DP1134_3	57.174	26.302			0.3599	0.41658	NaN	1	0	Median	23386000	17148000	6238200	501	66;179;201	463	808	1586	1586	74	1	9606
KLFIGGLSFETTEESLR	1	1	Unmodified	1926.0098	0.0098429899	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	0	1	3	0			1			21.067	21.067	3	0.00020849	16032	DP1134_3	125.41	91.023			NaN	NaN	NaN	0	0	Median	9302600	0	9302600	502	99	464	809	1587	1587		1	9606
KLFNLSKEDDVR	2	1	Unmodified	1462.778	0.77799256	166	P62753	RPS6	40S ribosomal protein S6	yes	yes	0	0	2	4	0				1		16.838	16.838	3	0.022944	9425	DP1134_4	81.239	48.035			NaN	NaN	NaN	0	0	Median	6319200	6319200	0	503	166	465	810	1588	1588		1	9606
KLGVQTVAVYSEADR	1	1	Unmodified	1634.8628	0.86278482	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	1	2	0		3				17.528	17.528	2;3	8.8897E-49	10990	DP1134_2	193.11	168.05			0.61483	0.62804	4.6678	2	0	Median	49002000	35129000	13874000	504	241	466	811;812;813	1589;1590;1591;1592;1593;1594	1593		6	9606
KLLETECPQYIR	1	1	Unmodified	1548.797	0.79701344	55	P05109	S100A8	Protein S100-A8;Protein S100-A8, N-terminally processed	yes	yes	0	0	1	5	0					1	17.275	17.275	3	0.024885	9799	DP1134_5	72.705	45.762			NaN	NaN	NaN	0	0	Median	22005000	22005000	0	505	55	467	814	1595	1595		1	9606
KMGAMAKPDCIITCDGK	3	0	2 Oxidation (M)	1926.8672	0.86715997	188	Q01469	FABP5	Fatty acid-binding protein, epidermal	yes	yes	0	2	2	5	0					1	14.715	14.715	3	0.0016899	5598	DP1134_5	102.03	82.135			NaN	NaN	NaN	0	0	Median	2795800	2795800	0	506	188	468	815	1596	1596	170;171	1	9606
KPLPDHVSIVEPKDEILPTTPISEQK	3	0	Unmodified	2909.575	0.57498923	102	P23396	RPS3	40S ribosomal protein S3	yes	yes	0	0	2	4	0				1		18.478	18.478	4	0.0003129	12170	DP1134_4	114.75	79.562			NaN	NaN	NaN	0	0	Median	24787000	24787000	0	507	102	469	816	1597;1598	1597		2	9606
KQGTIFLAGPPLVK	2	0	Unmodified	1467.8813	0.88133542	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			2			19.128	19.128	2;3	9.3239E-49	13178	DP1134_3	207.95	181.91			0.34319	0.34397	5.6999	2	0	Median	381530000	279350000	102190000	508	251	470	817;818	1599;1600;1601;1602;1603;1604;1605;1606;1607	1605		9	9606
KQTALVELLK	2	0	Unmodified	1141.7071	0.70705945	13	CON__P02769			yes	yes	0	0	1	2	0		1				18.611	18.611	2	1.1978000000000002E-78	12694	DP1134_2	204.34	78.524		+	NaN	NaN	NaN	0	0	Median	139470000	139470000	0	509	13	471	819	1608;1609	1608		2	
KQVVNIPSFIVR	1	1	Unmodified	1398.8347	0.83471958	132	P46781	RPS9	40S ribosomal protein S9	yes	yes	0	0	1	4	0				1		19.578	19.578	2	5.7901E-05	13790	DP1134_4	127.76	81.303			NaN	NaN	NaN	0	0	Median	7791000	7791000	0	510	132	472	820	1610	1610		1	9606
KSAEFLLHMLK	2	0	Oxidation (M)	1331.7271	0.72714296	92	P18621	RPL17	60S ribosomal protein L17	yes	yes	0	1	1	4	0				1		17.378	17.378	3	0.016209	10502	DP1134_4	74.962	31.065			NaN	NaN	NaN	0	0	Median	10350000	10350000	0	511	92	473	821	1611	1611	103	1	9606
KSFNDDAMLIEK	2	0	Oxidation (M)	1425.681	0.68098063	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	1	2.67	0.943		2		1		16.767	16.767	2;3	1.5854E-07	9826	DP1134_2	132.5	91.422			0.47008	0.45746	13.883	2	0	Median	280780000	192520000	88255000	512	241	474	822;823;824	1612;1613;1614;1615;1616;1617	1612	247	6	9606
KSFNDDAMLIEK	2	0	Unmodified	1409.6861	0.68606601	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	1	2	0		1				17.71	17.71	2	7.5514E-191	11306	DP1134_2	246.56	165.04			NaN	NaN	NaN	0	0	Median	118130000	118130000	0	513	241	474	825	1618	1618		1	9606
KSGVSDHWALDDHHALHLTR	1	1	Unmodified	2294.1305	0.13046068	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			4			16.895	16.895	3;4;5;6	2.8047E-33	9426	DP1134_3	148.85	88.231			0.53883	0.62369	22.996	4	0	Median	604770000	361170000	243600000	514	251	475	826;827;828;829	1619;1620;1621;1622;1623;1624;1625;1626;1627;1628	1626		10	9606
KTEELEEESFPER	1	1	Unmodified	1621.7471	0.74714594	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	1	1	0	6					16.733	16.733	2;3	3.5526E-86	8501	DP1134_1	246.56	162.37			NaN	NaN	NaN	0	0	Median	65838000	65838000	0	515	266	476	830;831;832;833;834;835	1629;1630;1631;1632;1633;1634;1635;1636;1637;1638	1632		10	9606
KTGQPMINLYTDR	1	1	Oxidation (M)	1551.7715	0.77152697	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	1	1	2	0		1				16.838	16.838	3	0.0088301	9876	DP1134_2	82.102	48.417			NaN	NaN	NaN	0	0	Median	18998000	0	18998000	516	119	477	836	1639	1639	122	1	9606
KTGQPMINLYTDR	1	1	Unmodified	1535.7766	0.77661235	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	0	1	2	0		1				17.821	17.821	3	0.018185	11452	DP1134_2	72.209	39.201			NaN	NaN	NaN	0	0	Median	0	0	0	517	119	477	837	1640	1640		1	9606
KTGQPMINLYTDRETGK	2	1	Oxidation (M)	1966.9782	0.97822529	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	1	2	2	0		1				16.079	16.079	3	0.0084948	8750	DP1134_2	50.178	28.579			5.8742	6.4055	NaN	1	0	Median	56445000	8220400	48225000	518	119	478	838	1641	1641	122	1	9606
KTGQPMINLYTDRETGK	2	1	Unmodified	1950.9833	0.98331066	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	0	2	2	0		1				16.911	16.911	3	1.0721000000000001E-68	10005	DP1134_2	183.76	153.02			6.463	7.0475	NaN	1	0	Median	29786000	4051600	25735000	519	119	478	839	1642;1643;1644;1645	1643		4	9606
KTTHFVEGGDAGNREDQINR	1	2	Unmodified	2243.0679	0.067920004	91	P18124	RPL7	60S ribosomal protein L7	yes	yes	0	0	2	4	0				1		14.631	14.631	4	4.9126E-06	5834	DP1134_4	65.175	54.947			0.4973	0.5244	NaN	1	0	Median	9593400	6272200	3321200	520	91	479	840	1646	1646		0	9606
KTVTAMDVVYALK	2	0	Oxidation (M)	1453.7851	0.78505177	167	P62805	HIST1H4A	Histone H4	yes	yes	0	1	1	5	0					1	18.57	18.57	3	0.01288	11687	DP1134_5	52.008	37.78			0.49372	0.528	NaN	1	0	Median	8372200	5050200	3322000	521	167	480	841	1647	1647	158	1	9606
KTVTAMDVVYALKR	2	1	Oxidation (M)	1609.8862	0.8861628	167	P62805	HIST1H4A	Histone H4	yes	yes	0	1	2	5	0					1	18.04	18.04	3	4.2576000000000003E-29	10950	DP1134_5	162.94	146.68			0.61033	0.63085	NaN	1	0	Median	16418000	9916700	6501600	522	167	481	842	1648;1649;1650;1651	1650	158	4	9606
KVNNADDFPNLFR	1	1	Unmodified	1548.7685	0.76849051	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					19.591	19.591	2;3	1.0216E-12	12905	DP1134_1	147.96	122.23			0.46283	0.55838	0.8812	2	0	Median	942830000	620150000	322670000	523	199	482	843;844	1652;1653;1654	1652		3	9606
KVPQVSTPTLVEVSR	1	1	Unmodified	1638.9305	0.93047046	13;12	CON__P02769;CON__P02768-1;P02768	ALB	Serum albumin	no	no	0	0	1	2.5	1.12	2	2	2	2		17.879	17.879	2;3	0	11608	DP1134_2	257.48	234.93		+	NaN	NaN	NaN	0	0	Median	1250100000	1250100000	0	524	13;12	483	845;846;847;848;849;850;851;852	1655;1656;1657;1658;1659;1660;1661;1662;1663;1664;1665;1666	1658		12	9606
KVVNPLFEK	2	0	Unmodified	1072.6281	0.62808085	164	P62424	RPL7A	60S ribosomal protein L7a	yes	yes	0	0	1	4	0				1		16.909	16.909	2	0.012706	9621	DP1134_4	88.37	61.768			0.44075	0.45572	NaN	1	0	Median	14924000	9902300	5021400	525	164	484	853	1667	1667		1	9606
LAADDFR	0	1	Unmodified	806.39227	0.39226725	15;14;8;19	CON__P13645;P13645;CON__P02535-1;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;CON__P05784;CON__REFSEQ:XP_986630;CON__Q2M2I5;CON__A2AB72;CON__Q497I4;CON__O76015;CON__Q14525;CON__Q14532;CON__Q92764;CON__Q9UE12;CON__O76013;CON__Q15323;CON__A2A5Y0;Q15323;P05783;Q14532;O76014;Q92764;O76013;Q14525;Q2M2I5;CON__O76014;O76015;CON__P02533;P02533;CON__Q6IFX2;CON__A2A4G1;CON__P19012;P19012;CON__P08727;CON__P19001;P08727;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT10;KRT28;KRT31;KRT18;KRT32;KRT37;KRT35;KRT36;KRT33B;KRT24;KRT38;KRT14;KRT15;KRT19;KRT17;KRT16	Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cuticular Ha1;Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha7;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha6;Keratin, type I cuticular Ha3-II;Keratin, type I cytoskeletal 24;Keratin, type I cuticular Ha8;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	0	2.5	1.12	1	1	1	1		16.621	16.621	2	6.545E-05	9625	DP1134_2	143.97	66.031		+	NaN	NaN	NaN	0	0	Median	1362100000	1362100000	0	526	15;8;19;14	485	854;855;856;857	1668;1669;1670;1671	1669		4	9606
LALDLEIATYR	0	1	Unmodified	1276.7027	0.70270235	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2	0		1				21.297	21.297	2	0.011587	16851	DP1134_2	109.66	0		+	NaN	NaN	NaN	0	0	Median	6689200	6689200	0	527	51	486	858	1672	1672		1	9606
LAMQEFMILPVGAANFR	0	1	Oxidation (M)	1922.9747	0.97466023	61	P06733	ENO1	Alpha-enolase	yes	yes	0	1	0	3	0			1			22.509	22.509	2	0.020746	18228	DP1134_3	111.5	63.784			NaN	NaN	NaN	0	0	Median	2375600	2375600	0	528	61	487	859	1673	1673	70	1	9606
LAPITSDPTEATAVGAVEASFK	1	0	Unmodified	2174.1107	0.11067925	84	P14618	PKM	Pyruvate kinase PKM	yes	yes	0	0	0	3	0			1			21.703	21.703	2	0.0055838	17089	DP1134_3	118.19	76.79			NaN	NaN	NaN	0	0	Median	3523100	3523100	0	529	84	488	860	1674	1674		1	9606
LAQHITYVHQHSR	0	1	Unmodified	1588.8223	0.82225741	116	P33993	MCM7	DNA replication licensing factor MCM7	yes	yes	0	0	0	2	0		1				14.048	14.048	4	0.00054797	5774	DP1134_2	85.271	54.728			0.63067	0.73715	NaN	1	0	Median	4226600	2611400	1615100	530	116	489	861	1675;1676	1675		2	9606
LASYLDK	1	0	Unmodified	808.43307	0.43306943	15;14;8;19;17	CON__P13645;P13645;CON__Q99456;Q99456;CON__P05784;CON__P02533;P02533;CON__A2A4G1;CON__P19012;P19012;CON__P08727;CON__P19001;P08727;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779;CON__P35527;P35527	KRT10;KRT12;KRT14;KRT15;KRT19;KRT17;KRT16;KRT9	Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 9	no	no	0	0	0	4	0				1		16.189	16.189	2	7.758E-05	8252	DP1134_4	143.02	74.534		+	NaN	NaN	NaN	0	0	Median	9074900	9074900	0	531	15;8;19;14;17	490	862	1677	1677		1	9606
LASYLDKVR	1	1	Unmodified	1063.6026	0.60259438	15;14;8;19	CON__P13645;P13645;CON__Q99456;Q99456;CON__P02533;P02533;CON__A2A4G1;CON__P19012;P19012;CON__P08727;CON__P19001;P08727;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779	KRT10;KRT12;KRT14;KRT15;KRT19;KRT17;KRT16	Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	1	3.2	1.33	1		2	1	1	16.575	16.575	2;3	0.001613	8297	DP1134_1	134.81	71.504		+	NaN	NaN	NaN	0	0	Median	116170000	116170000	0	532	15;8;19;14	491	863;864;865;866;867	1678;1679;1680;1681;1682	1678		5	9606
LAVNMVPFPR	0	1	Oxidation (M)	1158.6219	0.62194961	66;179;201	P07437;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;P04350;Q3ZCM7;A6NNZ2;Q13509	TUBB;TUBB6;TUBB1;TUBB4B;TUBB4A;TUBB8;TUBB3	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-3 chain	no	no	0	1	0	3	0			1			19.028	19.028	2	1.3224E-08	12887	DP1134_3	148.04	109.08			0.43941	0.53715	NaN	1	0	Median	103020000	71155000	31861000	533	66;179;201	492	868	1683	1683	74	1	9606
LAVNMVPFPR	0	1	Unmodified	1142.627	0.62703499	66;179;201	P07437;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;P04350;Q3ZCM7;A6NNZ2;Q13509	TUBB;TUBB6;TUBB1;TUBB4B;TUBB4A;TUBB8;TUBB3	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-3 chain	no	no	0	0	0	3	0			1			20.327	20.327	2	0.022158	14746	DP1134_3	85.161	50.009			0.4387	0.53627	NaN	1	0	Median	53477000	37823000	15654000	534	66;179;201	492	869	1684	1684		0	9606
LDHKFDLMYAK	2	0	Oxidation (M)	1395.6857	0.68567208	178;246	P68363;P68366;A6NHL2;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q9NY65	TUBA1B;TUBA4A;TUBAL3;TUBA1C;TUBA1A;TUBA8	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha chain-like 3;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain	no	no	0	1	1	3	0			1			16.749	16.749	3	0.0067897	9269	DP1134_3	70.728	42.762			0.62262	0.63827	NaN	1	0	Median	102490000	66927000	35565000	535	178;246	493	870	1685	1685	165	1	9606
LDKAQIHDLVLVGGSTR	1	1	Unmodified	1821.0108	0.010846043	74	P0DMV8;P0DMV9	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	yes	no	0	0	1	2	0		1				18.431	18.431	3	3.1439E-08	12557	DP1134_2	123.76	93.675			1.1352	1.1596	NaN	1	0	Median	12661000	4756400	7904800	536	74	494	871	1686	1686		1	9606
LDLLEEK	1	0	Unmodified	858.46985	0.46984887	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					18.294	18.294	2	8.5656E-09	10929	DP1134_1	153.15	0			NaN	NaN	NaN	0	0	Median	60788000	60788000	0	537	199	495	872	1687;1688	1688		2	9606
LDNASAFQGAVISPHYDSLLVK	1	0	Unmodified	2344.2063	0.20631097	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.75	0.829	2	1	1			20.568	20.568	2;3	4.3013E-66	14452	DP1134_1	181.64	181.64			0.49117	0.59429	15.57	3	0	Plateau	1193400000	804350000	389090000	538	78	496	873;874;875;876	1689;1690;1691;1692;1693;1694;1695;1696;1697;1698;1699;1700;1701;1702	1692		14	9606
LDSELKNMQDMVEDYR	1	1	2 Oxidation (M)	2016.8769	0.87685626	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	2	1	2	0		1				16.896	16.896	3	0.0024031	9991	DP1134_2	99.069	80.598		+	NaN	NaN	NaN	0	0	Median	68899000	68899000	0	539	51	497	877	1703	1703	51;52	1	9606
LDTSEVVFNSK	1	0	Unmodified	1237.619	0.6190323	134	P47929	LGALS7	Galectin-7	yes	yes	0	0	0	5	0					1	18.128	18.128	2	5.8506E-79	11083	DP1134_5	202.44	110.59			NaN	NaN	NaN	0	0	Median	19064000	19064000	0	540	134	498	878	1704;1705	1704		2	9606
LECVEPNCR	0	1	Unmodified	1175.5063	0.50632751	182	Q969Q0;P83881	RPL36AL;RPL36A	60S ribosomal protein L36a-like;60S ribosomal protein L36a	yes	no	0	0	0	5	0					1	15.085	15.085	2	0.0054119	6157	DP1134_5	128.69	98			NaN	NaN	NaN	0	0	Median	6833400	6833400	0	541	182	499	879	1706	1706		1	9606
LEEAEKAADESER	1	1	Unmodified	1475.674	0.673981	23	CON__Q3SX28;P67936;P09493;P07951;P06753	TPM4;TPM1;TPM2;TPM3	Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin beta chain;Tropomyosin alpha-3 chain	yes	no	0	0	1	4	0				1		13.985	13.985	3	0.01288	5238	DP1134_4	113.65	81.395		+	NaN	NaN	NaN	0	0	Median	925460	925460	0	542	23	500	880	1707	1707		1	9606
LELAQYR	0	1	Unmodified	891.48142	0.48141661	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			17.302	17.302	2	0.0036137	10101	DP1134_3	127.66	41.145			NaN	NaN	NaN	0	0	Median	0	0	0	543	104	501	881	1708	1708		1	9606
LENEIQTYR	0	1	Unmodified	1164.5775	0.57750184	15	CON__P13645;P13645;CON__P02535-1	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			16.505	16.505	2	8.0376E-11	8943	DP1134_3	153.08	94.293		+	NaN	NaN	NaN	0	0	Median	67575000	67575000	0	544	15	502	882	1709	1709		1	9606
LEQEIATYRR	0	2	Unmodified	1277.6728	0.67279921	14;8;19	CON__P02533;P02533;CON__Q6IFX2;CON__Q61782;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT14;KRT20;KRT17;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	1	3	0			1			15.575	15.575	3	0.034105	7225	DP1134_3	87.913	39.117		+	NaN	NaN	NaN	0	0	Median	0	0	0	545	8;19;14	503	883	1710	1710		1	9606
LFDQAFGLPR	0	1	Unmodified	1162.6135	0.61349341	53	P04792	HSPB1	Heat shock protein beta-1	yes	yes	0	0	0	4	0				1		20.923	20.923	2	1.0173999999999999E-19	15977	DP1134_4	159.04	79.571			NaN	NaN	NaN	0	0	Median	8336700	8336700	0	546	53	504	884	1711	1711		1	9606
LFIGGLSFETTDESLR	0	1	Unmodified	1783.8992	0.89922991	71	P09651;Q32P51	HNRNPA1;HNRNPA1L2	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2	yes	no	0	0	0	3.67	0.471			1	2		22.404	22.404	2	0.00018824	18015	DP1134_3	125.36	80.281			NaN	NaN	NaN	0	0	Median	9108500	0	9108500	547	71	505	885;886;887	1712;1713;1714	1712		3	9606
LFIGGLSFETTEESLR	0	1	Unmodified	1797.9149	0.91487997	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	0	0	3.5	0.5			1	1		22.458	22.458	2	1.4508E-93	18227	DP1134_4	206.1	177.14			2.4274	2.7235	40.085	2	0	Median	26947000	7406000	19541000	548	99	506	888;889	1715;1716;1717;1718;1719;1720;1721	1720		7	9606
LFLQGPK	1	0	Unmodified	801.47487	0.47487467	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				17.857	17.857	2	0.0014744	10305	DP1134_1	109.88	70.859			0.53256	0.64676	15.048	2	0	Median	603780000	398410000	205370000	549	78	507	890;891	1722;1723;1724;1725;1726;1727	1722		6	9606
LFSMENWGGATFDVAMR	0	1	2 Oxidation (M)	1962.8604	0.86041834	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	2	0	1	0	1					21.164	21.164	2	0.00094451	15276	DP1134_1	106.54	81.689			NaN	NaN	NaN	0	0	Median	64083000	37309000	26774000	550	78	508	892	1728;1729	1728	94;95	2	9606
LFSMENWGGATFDVAMR	0	1	Oxidation (M)	1946.8655	0.86550371	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1.67	0.471	1	2				22.311	22.311	2	0.00015622	17880	DP1134_2	117.07	103.34			0.70225	0.86743	31.264	3	0	Median	31300000	17690000	13610000	551	78	508	893;894;895	1730;1731;1732	1731	94;95	3	9606
LFTFHADICTLPDTEK	1	0	Unmodified	1906.9135	0.91349976	13	CON__P02769			yes	yes	0	0	0	1.5	0.5	1	1				20.156	20.156	3	0.0052277	13740	DP1134_1	102.65	63.506		+	NaN	NaN	NaN	0	0	Median	91581000	91581000	0	552	13	509	896;897	1733;1734	1733		2	
LGEHNIDVLEGNEQFINAAK	1	0	Unmodified	2210.0968	0.096760517	7	CON__P00761			yes	yes	0	0	0	5	0					1	19.775	19.775	2	0	13662	DP1134_5	355.95	269.84		+	NaN	NaN	NaN	0	0	Median	95131000	95131000	0	553	7	510	898	1735	1735		1	
LGEYGFQNALIVR	0	1	Unmodified	1478.7882	0.78816332	13	CON__P02769			yes	yes	0	0	0	2	0		1				20.933	20.933	2	5.8287E-24	16399	DP1134_2	160.75	103.22		+	NaN	NaN	NaN	0	0	Median	226320000	226320000	0	554	13	511	899	1736;1737	1736		2	
LGGIPVGVVAVETR	0	1	Unmodified	1365.798	0.79799972	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	2	0.816	1	1	1			19.927	19.927	2	2.1058E-07	14200	DP1134_3	126.66	78.057			0.49026	0.57303	7.8832	3	0	Median	793710000	588610000	205110000	555	199	512	900;901;902	1738;1739;1740;1741;1742	1741		5	9606
LGHPDTLNQGEFK	1	0	Unmodified	1454.7154	0.7153923	60	P06702	S100A9	Protein S100-A9	yes	yes	0	0	0	4	0				1		16.281	16.281	3	0.022388	8453	DP1134_4	73.082	46.332			NaN	NaN	NaN	0	0	Median	8546400	8546400	0	556	60	513	903	1743	1743		1	9606
LGTPELSTAER	0	1	Unmodified	1172.6037	0.60371659	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	2	1	1		1			16.71	16.71	2	2.5817E-65	8382	DP1134_1	195.57	149.6			0.48506	0.59915	NaN	1	0	Median	729410000	490640000	238770000	557	199	514	904;905	1744;1745;1746;1747;1748;1749;1750	1746		7	9606
LGTPELSTAERK	1	1	Unmodified	1300.6987	0.69867961	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1.75	1.3	3			1		15.547	15.547	2;3	7.749900000000001E-33	6413	DP1134_1	169.21	117.48			0.59223	0.71449	NaN	1	0	Median	117350000	90059000	27287000	558	199	515	906;907;908;909	1751;1752;1753;1754;1755	1752		5	9606
LGVQTVAVYSEADR	0	1	Unmodified	1506.7678	0.7678218	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				18.611	18.611	2	0.0069983	12828	DP1134_2	122.42	66.96			NaN	NaN	NaN	0	0	Median	103320000	103320000	0	559	241	516	910	1756	1756		1	9606
LHFFMPGFAPLTSR	0	1	Unmodified	1619.8283	0.82825399	66;179	P07437;Q9BUF5;P68371;P04350;Q3ZCM7;A6NNZ2	TUBB;TUBB6;TUBB4B;TUBB4A;TUBB8	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334	no	no	0	0	0	3	0			2			22.073	22.073	2;3	5.2946E-111	17533	DP1134_3	213.8	103.26			0.39985	0.48878	3.7886	2	0	Median	72297000	50812000	21485000	560	66;179	517	911;912	1757;1758;1759;1760;1761;1762	1761		6	9606
LHFFMPGFAPLTSR	0	1	Oxidation (M)	1635.8232	0.82316861	66;179	P07437;Q9BUF5;P68371;P04350;Q3ZCM7;A6NNZ2	TUBB;TUBB6;TUBB4B;TUBB4A;TUBB8	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334	no	no	0	1	0	3	0			1			20.824	20.824	3	0.00054967	15525	DP1134_3	110.38	57.558			NaN	NaN	NaN	0	0	Median	60662000	60662000	0	561	66;179	517	913	1763;1764	1763	75	2	9606
LHPFHVIR	0	1	Unmodified	1017.5872	0.58721908	107	P27635;Q96L21	RPL10;RPL10L	60S ribosomal protein L10;60S ribosomal protein L10-like	yes	no	0	0	0	4	0				1		16.481	16.481	3	0.018998	8871	DP1134_4	79.116	43.671			NaN	NaN	NaN	0	0	Median	32635000	32635000	0	562	107	518	914	1765	1765		1	9606
LIDLDPSVDTLK	1	0	Unmodified	1327.7235	0.72349737	271				yes	yes	0	0	0	3	1		1		1		24.129	24.129	2	0.0092502	21042	DP1134_2	109.29	47.511	+		NaN	NaN	NaN	0	0	Median	9035100	9035100	0	563	271	519	915;916	1766;1767;1768	1766		3	9606
LIEVDDER	0	1	Unmodified	987.48729	0.48728985	166	P62753	RPS6	40S ribosomal protein S6	yes	yes	0	0	0	4	0				1		16.189	16.189	2	0.01382	8470	DP1134_4	96.253	70.516			0.61272	0.63093	NaN	1	0	Median	34393000	20010000	14383000	564	166	520	917	1769	1769		1	9606
LIGEYGLR	0	1	Unmodified	919.51272	0.51271674	132	P46781	RPS9	40S ribosomal protein S9	yes	yes	0	0	0	4	0				1		18.177	18.177	2	1.1813E-05	11741	DP1134_4	143.02	50.829			NaN	NaN	NaN	0	0	Median	8016800	0	8016800	565	132	521	918	1770	1770		1	9606
LIILENTIYLFSK	1	0	Unmodified	1565.9069	0.90688147	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				23.932	23.932	2	9.0167E-12	20750	DP1134_2	147.74	105.03			0.45417	0.55432	NaN	1	0	Median	3663100	2480400	1182700	566	241	522	919	1771;1772;1773;1774	1771		4	9606
LISQIVSSITASLR	0	1	Unmodified	1486.8719	0.87189295	178;246	P68363;P68366;Q9H853;Q9BQE3;Q9NY65	TUBA1B;TUBA4A;TUBA4B;TUBA1C;TUBA8	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1C chain;Tubulin alpha-8 chain	no	no	0	0	0	3	0			1			24.041	24.041	2	0.001122	20507	DP1134_3	118.23	54.193			NaN	NaN	NaN	0	0	Median	2597300	2597300	0	567	178;246	523	920	1775;1776	1776		2	9606
LKECCDKPLLEK	3	0	Unmodified	1531.7738	0.77383516	13	CON__P02769			yes	yes	0	0	2	2.33	0.471		2	1			14.903	14.903	3;4	4.0344E-24	6803	DP1134_2	160.18	83.257		+	NaN	NaN	NaN	0	0	Median	174090000	174090000	0	568	13	524	921;922;923	1777;1778;1779	1777		3	
LKEREEFLIPIYHQVAVQFADLHDTPGR	1	2	Unmodified	3320.7306	0.73059544	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	2	1	0	2					21.759	21.759	4;5	2.6608E-10	16233	DP1134_1	104.39	97.2			0.36404	0.36065	54.872	2	0	Median	56066000	40210000	15856000	569	199	525	924;925	1780;1781;1782	1780		2	9606
LKETGYVVERPSTTK	2	1	Unmodified	1706.9203	0.9202997	256	Q9NYF8	BCLAF1	Bcl-2-associated transcription factor 1	yes	yes	0	0	2	1.33	0.471	2	1				15.162	15.162	3;4	3.056E-07	5885	DP1134_1	123.29	74.632			0.6299	0.69842	37.064	3	0	Median	46057000	26648000	19409000	570	256	526	926;927;928	1783;1784;1785	1784		2	9606
LKGDDLQAIKK	3	0	Unmodified	1227.7187	0.71868677	67	P07910	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	yes	yes	0	0	2	4	0				1		14.631	14.631	3	7.1443E-06	5939	DP1134_4	134.13	61.93			NaN	NaN	NaN	0	0	Median	4908300	0	4908300	571	67	527	929	1786	1786		1	9606
LKGEATVSFDDPPSAK	2	0	Unmodified	1660.8308	0.83081599	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	0	1	2	0		1				16.704	16.704	3	0.0043312	9618	DP1134_2	103.66	20.417			NaN	NaN	NaN	0	0	Median	0	0	0	572	119	528	930	1787	1787		1	9606
LKPDPNTLCDEFK	2	0	Unmodified	1575.7603	0.76029359	13	CON__P02769			yes	yes	0	0	1	2	0		1				18.11	18.11	3	9.0455E-17	12022	DP1134_2	151.66	111.79		+	NaN	NaN	NaN	0	0	Median	19555000	19555000	0	573	13	529	931	1788;1789;1790	1789		3	
LKPDPNTLCDEFKADEK	3	0	Unmodified	2018.9619	0.96190652	13	CON__P02769			yes	yes	0	0	2	2.5	1.12	1	1	1	1		17.856	17.856	3	4.6145E-95	11521	DP1134_2	202.01	147.92		+	NaN	NaN	NaN	0	0	Median	282110000	282110000	0	574	13	530	932;933;934;935	1791;1792;1793;1794;1795;1796;1797;1798;1799	1793		9	
LKYENEVALR	1	1	Unmodified	1233.6717	0.67173657	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	1	2	0		1				16.673	16.673	2	0.029708	9564	DP1134_2	102.62	61.192		+	NaN	NaN	NaN	0	0	Median	0	0	0	575	15	531	936	1800	1800		1	9606
LLADQAEAR	0	1	Unmodified	985.51926	0.51925868	184	P84098	RPL19	60S ribosomal protein L19	yes	yes	0	0	0	4	0				1		15.085	15.085	2	6.5932E-08	6661	DP1134_4	148.04	52.25			0.61204	0.63022	NaN	1	0	Median	15636000	9518900	6117500	576	184	532	937	1801	1801		1	9606
LLEGEDAHLSSQQASGQSYSSR	0	1	Unmodified	2349.0833	0.083295297	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	0	3	0			1			16.605	16.605	3	0.0015247	8975	DP1134_3	96.55	66.398		+	NaN	NaN	NaN	0	0	Median	34899000	34899000	0	577	14	533	938	1802	1802		1	9606
LLEPVLLLGK	1	0	Unmodified	1093.7111	0.71108219	156	P62249	RPS16	40S ribosomal protein S16	yes	yes	0	0	0	5	0					3	21.898	21.898	2	0.0056139	16815	DP1134_5	134.48	67.679			NaN	NaN	NaN	0	0	Median	2355200	0	2355200	578	156	534	939;940;941	1803;1804;1805	1804		3	9606
LLEQYKEESK	2	0	Unmodified	1265.6503	0.65033243	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	1	2	0		1				15.209	15.209	3	0.035863	7268	DP1134_2	64.103	41.417			0.48153	0.49319	NaN	1	0	Median	6999100	4847000	2152000	579	186	535	942	1806	1806		1	9606
LLETECPQYIR	0	1	Unmodified	1420.7021	0.70205043	55	P05109	S100A8	Protein S100-A8;Protein S100-A8, N-terminally processed	yes	yes	0	0	0	3.5	1.5		1			1	18.143	18.143	2	1.3089E-157	10959	DP1134_5	234.82	148.68			NaN	NaN	NaN	0	0	Median	504360000	504360000	0	580	55	536	943;944	1807;1808;1809	1808		3	9606
LLETESFQMNR	0	1	Oxidation (M)	1382.65	0.65001485	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					17.502	17.502	2	5.8576E-20	9659	DP1134_1	163.15	126.39			0.5973	0.73779	NaN	1	0	Median	861480000	519630000	341850000	581	199	537	945	1810;1811	1810	189	2	9606
LLEVEHPAAK	1	0	Unmodified	1105.6132	0.61315906	90	P17987	TCP1	T-complex protein 1 subunit alpha	yes	yes	0	0	0	3	0			1			15.126	15.126	2	0.023446	6516	DP1134_3	98.033	29.612			NaN	NaN	NaN	0	0	Median	0	0	0	582	90	538	946	1812	1812		1	9606
LLGQFTLIGIPPAPR	0	1	Unmodified	1591.945	0.94499831	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2	0		1				22.595	22.595	2	6.2944E-131	18742	DP1134_2	218.15	218.15			1.3954	1.6309	NaN	1	0	Median	17590000	7454700	10135000	583	122	539	947	1813;1814;1815;1816;1817;1818	1814		6	9606
LLHYLGHVMVNGPTTPIPVK	1	0	Unmodified	2185.2082	0.20816564	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	4					19.415	19.415	2;3;4	9.7521E-65	12680	DP1134_1	174.87	174.87			0.37186	0.44934	45.681	2	0	Median	112440000	84727000	27717000	584	78	540	948;949;950;951	1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831	1825		13	9606
LLHYLGHVMVNGPTTPIPVK	1	0	Oxidation (M)	2201.2031	0.20308026	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1.33	0.471	2	1				18.797	18.797	2;3	5.6707E-08	11741	DP1134_1	133.28	112.46			0.46152	0.5633	NaN	1	0	Median	120990000	115730000	5260500	585	78	540	952;953;954	1832;1833;1834;1835	1832	96	4	9606
LLKEYQELMNVK	2	0	Oxidation (M)	1522.8065	0.8065155	9;50	CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	1	1	3	0			1			17.925	17.925	3	0.0086562	10936	DP1134_3	90.913	46.546		+	NaN	NaN	NaN	0	0	Median	15663000	15663000	0	586	9;50	541	955	1836	1836	6	1	9606
LLLEAMDELEVAFNNTNVR	0	1	Unmodified	2190.0991	0.099068703	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	3					25.109	25.109	2;3	4.065900000000001E-301	21025	DP1134_1	274.39	274.39			0.42164	0.52082	NaN	1	0	Median	5012000	2228000	2784000	587	199	542	956;957;958	1837;1838;1839;1840;1841;1842;1843;1844	1838		8	9606
LLLEDLVK	1	0	Unmodified	941.57973	0.57973367	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1.5	0.5	1	1				21.244	21.244	2	1.1813E-05	15368	DP1134_1	143.02	52.034			0.61717	0.75327	NaN	1	0	Median	295210000	288700000	6512900	588	199	543	959;960	1845;1846	1845		2	9606
LLLGAGAVAYGVR	0	1	Unmodified	1258.7398	0.73975656	243	Q99623	PHB2	Prohibitin-2	yes	yes	0	0	0	4	0				1		20.04	20.04	2	0.0019073	14730	DP1134_4	110.87	91.768			0.59276	0.61037	NaN	1	0	Median	18447000	11091000	7356400	589	243	544	961	1847	1847		1	9606
LLLPGELAK	1	0	Unmodified	952.59572	0.59571809	36;62	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08;A0A2R8Y619;Q8N257;Q16778;P33778;P23527;P06899	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J	no	no	0	0	0	5	0					1	19.386	19.386	2	0.013697	13060	DP1134_5	118.74	38.281			0.4332	0.50546	NaN	1	0	Median	287170000	201150000	86018000	590	36;62	545	962	1848;1849;1850;1851	1849		4	9606
LLLPWLEAR	0	1	Unmodified	1109.6597	0.65971533	185	Q00610	CLTC	Clathrin heavy chain 1	yes	yes	0	0	0	1	0	1					23.119	23.119	2	0.014204	18199	DP1134_1	119.27	54.028			NaN	NaN	NaN	0	0	Median	3610200	3610200	0	591	185	546	963	1852;1853	1852		2	9606
LLLQVQHASK	1	0	Unmodified	1135.6713	0.67134264	80	P12236	SLC25A6	ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed	no	no	0	0	0	2	1.41	2			1		16.056	16.056	3	2.1677E-05	7340	DP1134_1	114.4	76.893			0.74472	0.86509	NaN	1	0	Median	159680000	103580000	56103000	592	80	547	964;965;966	1854;1855;1856	1854		3	9606
LLRDYQELMNTK	1	1	Oxidation (M)	1538.7763	0.776278	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	1	1	2	0		1				17.106	17.106	3	0.035869	10199	DP1134_2	65.895	31.846		+	NaN	NaN	NaN	0	0	Median	24382000	24382000	0	593	51	548	967	1857	1857	50	1	9606
LLSNDEVTIK	1	0	Unmodified	1130.6183	0.61830402	233	Q92734	TFG	Protein TFG	yes	yes	0	0	0	3	0			1			17.427	17.427	2	0.010748	10305	DP1134_3	123.21	63.858			NaN	NaN	NaN	0	0	Median	0	0	0	594	233	549	968	1858	1858		1	9606
LLSVVPVPEGYSVK	1	0	Unmodified	1485.8443	0.84428121	249	Q9GZN8	C20orf27	UPF0687 protein C20orf27	yes	yes	0	0	0	3	0			1			20.327	20.327	2	3.8641E-05	14793	DP1134_3	123.62	85.922			NaN	NaN	NaN	0	0	Median	52365000	0	52365000	595	249	550	969	1859;1860	1859		2	9606
LLYAFAEATVPK	1	0	Unmodified	1321.7282	0.72818882	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			20.566	20.566	2	0.0014476	15232	DP1134_3	98.943	60.65			0.49911	0.60939	NaN	1	0	Median	22327000	14414000	7912700	596	57	551	970	1861;1862;1863;1864	1862		4	9606
LLYGESPWGVTPISFETPSNPPLAR	0	1	Unmodified	2727.3908	0.39081727	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	2					23.299	23.299	2;3	0.0017245	18512	DP1134_1	123.63	95.689			NaN	NaN	NaN	0	0	Median	5975100	5975100	0	597	28	552	971;972	1865;1866	1865		2	9606
LMTQMRMGKK	2	1	3 Oxidation (M)	1270.6196	0.61958312	261	Q9UKN7	MYO15A	Unconventional myosin-XV	yes	yes	0	3	2	5	0					1	18.937	18.937	2	0.034397	12347	DP1134_5	54.549	24.806			NaN	NaN	NaN	0	0	Median	0	0	0	598	261	553	973	1867	1867	279;280;281	1	9606
LNDLEDALQQAKEDLAR	1	1	Unmodified	1940.9803	0.98033378	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	1	2.2	0.748	1	2	2			21.771	21.771	2;3	0	17611	DP1134_2	287.14	202.66		+	NaN	NaN	NaN	0	0	Median	68618000	68618000	0	599	51	554	974;975;976;977;978	1868;1869;1870;1871;1872	1870		5	9606
LNDLEEALQQAKEDLAR	1	1	Unmodified	1954.996	0.99598384	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	1	2	0		1				22.068	22.068	3	0.0046142	18020	DP1134_2	147.07	74.751		+	NaN	NaN	NaN	0	0	Median	2758100	2758100	0	600	18	555	979	1873;1874;1875	1874		3	9606
LNISYTR	0	1	Unmodified	865.46577	0.46576654	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				16.763	16.763	2	0.00099706	9708	DP1134_2	128.48	93.592			0.60991	0.71288	NaN	1	0	Median	290970000	181910000	109070000	601	241	556	980	1876;1877	1876		2	9606
LPCIYLVDSGGAYLPR	0	1	Unmodified	1792.9182	0.91819121	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.33	0.471			2	1		21.882	21.882	2;3	9.906699999999999E-132	17154	DP1134_3	222.18	193.38			0.24517	0.2997	NaN	1	0	Median	127090000	108450000	18647000	602	251	557	981;982;983	1878;1879;1880;1881;1882;1883	1878		6	9606
LPEDPLLSGLLDSPALK	1	0	Unmodified	1776.9873	0.98731663	137	P49327	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	yes	yes	0	0	0	1	0	2					23.697	23.697	2	2.7121E-07	19062	DP1134_1	156	104.16			NaN	NaN	NaN	0	0	Median	1868500	1868500	0	603	137	558	984;985	1884;1885	1884		2	9606
LPELLLK	1	0	Unmodified	824.53714	0.53714057	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					19.869	19.869	1;2	1.4776E-11	13404	DP1134_1	153.88	25.069			0.39002	0.47129	14.1	2	0	Median	150990000	106210000	44782000	604	199	559	986;987	1886;1887;1888	1886		2	9606
LPGGNEIGMVAWK	1	0	Oxidation (M)	1386.6966	0.69657112	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					19.39	19.39	2	0.031015	13187	DP1134_1	69.276	69.276			0.49482	0.59794	NaN	1	0	Median	942840000	623410000	319440000	605	199	560	988	1889	1889	190	0	9606
LPLQDVYK	1	0	Unmodified	974.54368	0.54368251	177	P68104;Q5VTE0;Q05639	EEF1A1;EEF1A1P5;EEF1A2	Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2	yes	no	0	0	0	3	0			1			18.125	18.125	2	0.010698	11478	DP1134_3	127.12	19.823			0.47466	0.57955	NaN	1	0	Median	137000000	95215000	41783000	606	177	561	989	1890	1890		1	9606
LPPQDFLDR	0	1	Unmodified	1099.5662	0.56620887	193	Q07065	CKAP4	Cytoskeleton-associated protein 4	yes	yes	0	0	0	2	0		1				18.857	18.857	2	0.0021835	13605	DP1134_2	131.06	67.497			NaN	NaN	NaN	0	0	Median	3494300	3494300	0	607	193	562	990	1891	1891		1	9606
LPTPVTDFILSR	0	1	Unmodified	1357.7606	0.76055158	227	Q8NEX9	SDR9C7	Short-chain dehydrogenase/reductase family 9C member 7	yes	yes	0	0	0	4	0				1		21.934	21.934	2	0.019413	17468	DP1134_4	101.97	38.555			NaN	NaN	NaN	0	0	Median	4721600	4721600	0	608	227	563	991	1892	1892		1	9606
LQVEHPVTECITGLDLVQEMIR	0	1	Oxidation (M)	2595.3037	0.30365852	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	0	2	0		1				20.844	20.844	3	8.7442E-12	16209	DP1134_2	125.11	125.11			0.45074	0.52683	NaN	1	0	Median	23072000	15534000	7538400	609	56	564	992	1893;1894;1895;1896	1895	58	4	9606
LQVEHPVTECITGLDLVQEMIR	0	1	Unmodified	2579.3087	0.3087439	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				22.737	22.737	3	3.265E-17	18981	DP1134_2	136.11	136.11			0.5113	0.59762	NaN	1	0	Median	10853000	7256600	3596000	610	56	564	993	1897;1898;1899;1900	1898		4	9606
LQVEHPVTEMITGTDLVEWQLR	0	1	Oxidation (M)	2609.3159	0.31593777	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		1				21.145	21.145	3	3.0069E-17	16615	DP1134_2	134.83	120.17			0.41067	0.48	NaN	1	0	Median	81147000	59254000	21893000	611	241	565	994	1901;1902	1901	248	2	9606
LQVEHPVTEMITGTDLVEWQLR	0	1	Unmodified	2593.321	0.32102315	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				22.404	22.404	3	0	18482	DP1134_2	285.27	265.72			0.56888	0.66492	NaN	1	0	Median	35517000	22905000	12612000	612	241	565	995	1903;1904;1905;1906;1907;1908	1903		6	9606
LRSEIDNVKK	2	1	Unmodified	1200.6826	0.68263561	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	0	2	3	0			1			13.017	13.017	3	0.0045489	3836	DP1134_3	102.53	22.291		+	NaN	NaN	NaN	0	0	Median	266100	266100	0	613	51	566	996	1909;1910	1909		2	9606
LSFMPFFLK	1	0	Unmodified	1128.6042	0.60417428	77	P11182	DBT	Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial	yes	yes	0	0	0	3	0			1			23.82	23.82	2	0.031147	20198	DP1134_3	62.659	31.972			0.44659	0.54528	NaN	1	0	Median	3030400	1929100	1101300	614	77	567	997	1911	1911		0	9606
LSIVPVRR	0	2	Unmodified	938.60253	0.6025348	85	P15880	RPS2	40S ribosomal protein S2	yes	yes	0	0	1	4	0				1		16.287	16.287	3	0.0084969	8643	DP1134_4	61.999	27.911			0.61191	0.66644	NaN	1	0	Median	11362000	6737100	4625300	615	85	568	998	1912	1912		1	9606
LSSLDNLK	1	0	Unmodified	888.49165	0.49164694	193	Q07065	CKAP4	Cytoskeleton-associated protein 4	yes	yes	0	0	0	2	0		1				16.846	16.846	2	0.016917	9901	DP1134_2	116.9	45.608			0.51053	0.62311	NaN	1	0	Median	20201000	13028000	7172800	616	193	569	999	1913	1913		1	9606
LSSPATLNSR	0	1	Unmodified	1044.5564	0.55637247	7	CON__P00761			yes	yes	0	0	0	3.33	1.25		1	1		1	15.556	15.556	2	1.8573999999999998E-50	7677	DP1134_2	190.26	86.053		+	NaN	NaN	NaN	0	0	Median	1723899999.9999998	1723899999.9999998	0	617	7	570	1000;1001;1002	1914;1915;1916;1917;1918;1919	1915		6	
LTAQFVAR	0	1	Unmodified	904.51305	0.51305109	212	Q15459	SF3A1	Splicing factor 3A subunit 1	yes	yes	0	0	0	2	0		1				16.849	16.849	2	0.022834	9868	DP1134_2	110.61	47.897			NaN	NaN	NaN	0	0	Median	0	0	0	618	212	571	1003	1920	1920		1	9606
LTDCVVMRDPASK	1	1	Oxidation (M)	1506.717	0.71704856	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	1	1	3	0			2			14.982	14.982	3	0.021314	6299	DP1134_3	69.352	40.281			NaN	NaN	NaN	0	0	Median	0	0	0	619	99	572	1004;1005	1921;1922	1921	104	2	9606
LTDCVVMRDPASKR	1	2	Oxidation (M)	1662.8182	0.81815959	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	1	2	3	0			1			14.393	14.393	3	0.020828	5446	DP1134_3	69.602	31.424			NaN	NaN	NaN	0	0	Median	0	0	0	620	99	573	1006	1923	1923	104	1	9606
LTFDSSFSPNTGKK	2	0	Unmodified	1527.7569	0.75692277	95	P21796	VDAC1	Voltage-dependent anion-selective channel protein 1	yes	yes	0	0	1	4	0				1		17.678	17.678	3	0.0049882	10782	DP1134_4	104.17	72.827			NaN	NaN	NaN	0	0	Median	2995800	2995800	0	621	95	574	1007	1924	1924		1	9606
LTFLVAQK	1	0	Unmodified	918.55385	0.55385327	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					18.89	18.89	2	1.1413999999999998E-21	11909	DP1134_1	163.84	104.24			0.72949	0.88151	NaN	1	0	Median	527770000	303290000	224480000	622	199	575	1008	1925	1925		0	9606
LTLFVNGQPRPLESSQVK	1	1	Unmodified	2012.1055	0.10547471	233	Q92734	TFG	Protein TFG	yes	yes	0	0	1	3	0			1			19.058	19.058	2	0.0053352	12913	DP1134_3	91.307	56.622			NaN	NaN	NaN	0	0	Median	0	0	0	623	233	576	1009	1926	1926		1	9606
LTMEMRHK	1	1	Oxidation (M)	1060.5158	0.51576998	225	Q8NCU4	KIAA1407	Coiled-coil domain-containing protein KIAA1407	yes	yes	0	1	1	5	0					1	22.098	22.098	1	0.021344	17101	DP1134_5	65.803	34.5			NaN	NaN	NaN	0	0	Median	8956100	0	8956100	624	225	577	1010	1927	1927	227	1	9606
LTSLVPFVDAFQLER	0	1	Unmodified	1733.9352	0.93522148	204	Q14152	EIF3A	Eukaryotic translation initiation factor 3 subunit A	yes	yes	0	0	0	1	0	1					23.91	23.91	2	3.194E-08	19379	DP1134_1	138.94	84.328			NaN	NaN	NaN	0	0	Median	2261000	2261000	0	625	204	578	1011	1928;1929;1930	1928		3	9606
LVDQNIFSFYLSR	0	1	Unmodified	1600.8249	0.82494275	64	P07339	CTSD	Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain	yes	yes	0	0	0	4	0				1		23.23	23.23	2	3.3242999999999996E-44	19380	DP1134_4	180.66	136.89			NaN	NaN	NaN	0	0	Median	3445000	3445000	0	626	64	579	1012	1931	1931		1	9606
LVKQMEDK	2	0	Oxidation (M)	1005.5165	0.51648149	195	Q0VF96	CGNL1	Cingulin-like protein 1	yes	yes	0	1	1	4	0				1		19.278	19.278	1	0.035008	13321	DP1134_4	45.952	6.9895			NaN	NaN	NaN	0	0	Median	120010000	120010000	0	627	195	580	1013	1932	1932	176	1	9606
LVNELTEFAK	1	0	Unmodified	1162.6234	0.6233894	13	CON__P02769			yes	yes	0	0	0	3	0			1			19.421	19.421	2	3.7509E-26	13467	DP1134_3	182.98	124.39		+	NaN	NaN	NaN	0	0	Median	0	0	0	628	13	581	1014	1933	1933		1	
LVPELDTIVPLESTK	1	0	Unmodified	1652.9237	0.92365374	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			21.524	21.524	2	9.986599999999999E-93	16669	DP1134_3	203.03	174.85			0.3517	0.42941	NaN	1	0	Median	74556000	54691000	19865000	629	57	582	1015	1934;1935;1936	1934		3	9606
LVQAFQFTDK	1	0	Unmodified	1195.6237	0.62372375	192	Q06830	PRDX1	Peroxiredoxin-1	yes	yes	0	0	0	4	0				1		19.228	19.228	2	0.0086759	13413	DP1134_4	119.21	74.816			NaN	NaN	NaN	0	0	Median	2057200	2057200	0	630	192	583	1016	1937	1937		1	9606
LVTDLTK	1	0	Unmodified	788.46437	0.46436956	13;12	CON__P02769;CON__P02768-1;P02768	ALB	Serum albumin	no	no	0	0	0	2.5	0.5		1	1			16.092	16.092	2	2.3579E-21	8113	DP1134_3	167.25	56.641		+	NaN	NaN	NaN	0	0	Median	220490000	220490000	0	631	13;12	584	1017;1018	1938;1939	1939		2	9606
LVVECVMNNVTCTR	0	1	Oxidation (M)	1709.7899	0.78989593	188	Q01469	FABP5	Fatty acid-binding protein, epidermal	yes	yes	0	1	0	5	0					1	17.451	17.451	2	7.6506E-14	9984	DP1134_5	148.78	110.2			NaN	NaN	NaN	0	0	Median	12918000	12918000	0	632	188	585	1019	1940;1941	1941	172	2	9606
LVVWAADR	0	1	Unmodified	928.51305	0.51305109	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				18.611	18.611	2	0.001304	12709	DP1134_2	133.81	88.84			0.62693	0.73277	NaN	1	0	Median	779750000	474620000	305130000	633	241	586	1020	1942	1942		1	9606
LYSPSQIGAFVLMK	1	0	Oxidation (M)	1568.8273	0.82725094	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	1	0	2	0		1				21.744	21.744	2	0.00073579	17510	DP1134_2	115.57	83.32			1.8627	2.2735	NaN	1	0	Median	11449000	3796600	7652500	634	122	587	1021	1943	1943	124	1	9606
LYSPSQIGAFVLMK	1	0	Unmodified	1552.8323	0.83233632	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2	0		1				22.519	22.519	2	1.1389E-10	18662	DP1134_2	132.78	87.916			2.1189	2.5861	NaN	1	0	Median	8910800	2868200	6042600	635	122	587	1022	1944;1945;1946	1945		3	9606
MAAACRCLSLLLLSTCVALLL	0	1	Acetyl (Protein N-term);Oxidation (M)	2406.2507	0.25070044	255	Q9NRI7	PPY2P	Putative pancreatic polypeptide 2	yes	yes	1	1	1	4	0				1		21.015	21.015	3	0.026082	16099	DP1134_4	44.382	21.5			NaN	NaN	NaN	0	0	Median	11856000	0	11856000	636	255	588	1023	1947	1947	274	1	9606
MAAAEAGGDDARCVR	0	2	Acetyl (Protein N-term);Oxidation (M)	1606.6828	0.68278832	1	A6NDG6	PGP	Phosphoglycolate phosphatase	yes	yes	1	1	1	2	0		1				21.589	21.589	2	0.034359	17268	DP1134_2	48.44	21.767			NaN	NaN	NaN	0	0	Median	0	0	0	637	1	589	1024	1948	1948	0	1	9606
MAAEEEAAAGGKVLR	1	1	Acetyl (Protein N-term);Oxidation (M)	1559.7614	0.76135622	231	Q8WYA1	ARNTL2	Aryl hydrocarbon receptor nuclear translocator-like protein 2	yes	yes	1	1	1	1	0	1					15.815	15.815	2	0.034868	6820	DP1134_1	46.352	6.4152			NaN	NaN	NaN	0	0	Median	0	0	0	638	231	590	1025	1949	1949	231	1	9606
MAALEVYVR	0	1	Oxidation (M)	1066.5481	0.54811597	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					18.095	18.095	2	0.00031581	10655	DP1134_1	138.83	70.039			NaN	NaN	NaN	0	0	Median	165650000	165650000	0	639	199	591	1026	1950	1950	191	1	9606
MADALDNYVIR	0	1	Oxidation (M)	1295.618	0.61798644	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	0	2	0		1				19.111	19.111	2	0.014761	13637	DP1134_2	100.02	66.639			0.54851	0.64111	NaN	1	0	Median	67248000	43202000	24046000	640	56	592	1027	1951	1951	59	1	9606
MADEAVCVGPAPTSK	1	0	Oxidation (M)	1547.696	0.69597877	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	0	2	0		1				15.892	15.892	2	2.6998E-37	8431	DP1134_2	170.04	134.5			0.41296	0.50403	NaN	1	0	Median	40860000	29627000	11233000	641	56	593	1028	1952;1953	1952	60	2	9606
MADNEVMDAFRKIMAAR	1	2	3 Oxidation (M)	2015.9227	0.92270102	38	O75528	TADA3	Transcriptional adapter 3	yes	yes	0	3	2	5	0					1	18.126	18.126	2	0.010406	11207	DP1134_5	83.081	18.441			NaN	NaN	NaN	0	0	Median	75199000	75199000	0	642	38	594	1029	1954	1954	42;43;44	1	9606
MAEGGGPEPGEQERR	0	2	Acetyl (Protein N-term);Oxidation (M)	1656.7162	0.71619694	207	Q14CS0	UBXN2B	UBX domain-containing protein 2B	yes	yes	1	1	1	2	0		1				16.664	16.664	2	0.034938	9548	DP1134_2	41.689	8.9587			NaN	NaN	NaN	0	0	Median	0	0	0	643	207	595	1030	1955	1955	215	1	9606
MAPVPLDDSNRPASLTK	1	1	Oxidation (M)	1826.9196	0.91964777	256	Q9NYF8	BCLAF1	Bcl-2-associated transcription factor 1	yes	yes	0	1	1	1	0	1					16.615	16.615	3	0.0011282	8239	DP1134_1	91.592	70.809			0.5246	0.6329	NaN	1	0	Median	44682000	27815000	16868000	644	256	596	1031	1956;1957;1958;1959	1958	275	4	9606
MASPVSITWAVR	0	1	Oxidation (M)	1332.686	0.68600643	260	Q9UBX7	KLK11	Kallikrein-11;Kallikrein-11 inactive chain 1;Kallikrein-11 inactive chain 2	yes	yes	0	1	0	1	0	1					23.904	23.904	2	0.031077	19461	DP1134_1	47.96	8.3374			0.42763	0.52821	NaN	1	0	Median	5295200	3627800	1667400	645	260	597	1032	1960	1960	278	0	9606
MATVAELK	1	0	Acetyl (Protein N-term);Oxidation (M)	919.46847	0.46846866	237	Q96NB1	FOPNL	LisH domain-containing protein FOPNL	yes	yes	1	1	0	4	1			1		1	21.524	21.524	2	0.025125	16825	DP1134_3	58.167	21.772			NaN	NaN	NaN	0	0	Median	5511400	5511400	0	646	237	598	1033;1034	1961;1962	1961	239	2	9606
MAVTFIGNSTAIQELFK	1	0	Oxidation (M)	1884.9655	0.96553533	66	P07437	TUBB	Tubulin beta chain	yes	yes	0	1	0	3	0			1			22.865	22.865	2	0	18766	DP1134_3	299.29	263.58			0.72438	0.88444	NaN	1	0	Median	23388000	13124000	10264000	647	66	599	1035	1963;1964;1965;1966	1966	76	4	9606
MAVTFIGNSTAIQELFKR	1	1	Oxidation (M)	2041.0666	0.066646362	66	P07437	TUBB	Tubulin beta chain	yes	yes	0	1	1	3	0			1			21.734	21.734	3	0.00036114	16913	DP1134_3	107.13	107.13			0.72697	0.84146	NaN	1	0	Median	12991000	7689700	5301700	648	66	600	1036	1967;1968	1967	76	2	9606
MDEPSPLAQPLELNQHSR	0	1	Acetyl (Protein N-term)	2103.0055	0.0055026685	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	1	0	0	1	0	2					20.573	20.573	2	1.8258E-60	14436	DP1134_1	201.06	136.23			NaN	NaN	NaN	0	0	Median	14817000	0	14817000	649	199	601	1037;1038	1969;1970;1971	1971		3	9606
MDPLNLSWYDDDLER	0	1	Acetyl (Protein N-term);Oxidation (M)	1938.8306	0.830558	83	P14416	DRD2	D(2) dopamine receptor	yes	yes	1	1	0	2	0		1				27.584	27.584	3	0.035043	25288	DP1134_2	43.813	25.797			NaN	NaN	NaN	0	0	Median	0	0	0	650	83	602	1039	1972	1972	102	1	9606
MDSFDEDLAR	0	1	Oxidation (M)	1213.4921	0.49211723	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	1	0	1	0	1					17.702	17.702	2	7.614099999999999E-38	10050	DP1134_1	176.6	152.45			NaN	NaN	NaN	0	0	Median	1248700	0	1248700	651	266	603	1040	1973	1973	286	1	9606
MDSLATSINQFALELSK	1	0	Oxidation (M)	1882.9346	0.93462914	136	P48595	SERPINB10	Serpin B10	yes	yes	0	1	0	1	0	1					23.415	23.415	2	0.013471	18532	DP1134_1	62.799	30.069			0.56938	0.68803	NaN	1	0	Median	25800000	15012000	10788000	652	136	604	1041	1974	1974	129	1	9606
MDSQRPEPR	0	2	Acetyl (Protein N-term);Oxidation (M)	1172.5244	0.52442041	26	E5RJM6	ANKRD65	Ankyrin repeat domain-containing protein 65	yes	yes	1	1	1	5	0					1	16.27	16.27	3	0.030216	8006	DP1134_5	59.35	34.574			NaN	NaN	NaN	0	0	Median	0	0	0	653	26	605	1042	1975	1975	29	1	9606
MEEKEDKHQQHK	3	0	Acetyl (Protein N-term)	1607.7362	0.7362041	223	Q8N5S3	C2orf73	Uncharacterized protein C2orf73	yes	yes	1	0	2	3.5	0.5			1	1		19.503	19.503	2	0.00058408	13717	DP1134_3	117.81	52.533			NaN	NaN	NaN	0	0	Median	291160000	291160000	0	654	223	606	1043;1044	1976;1977;1978	1976		3	9606
MEFAELIK	1	0	Acetyl (Protein N-term);Oxidation (M)	1037.5103	0.51033348	240	Q96QG7	MTMR9	Myotubularin-related protein 9	yes	yes	1	1	0	4	0				1		16.775	16.775	2	0.018271	9253	DP1134_4	68.422	7.944			NaN	NaN	NaN	0	0	Median	19901000	19901000	0	655	240	607	1045	1979	1979	240	1	9606
MEKFGMNFGGGPSK	2	0	Acetyl (Protein N-term);2 Oxidation (M)	1559.6748	0.6748494	236	Q96CN9	GCC1	GRIP and coiled-coil domain-containing protein 1	yes	yes	1	2	1	3	0			1			17.899	17.899	2	0.028804	11071	DP1134_3	53.327	20.137			NaN	NaN	NaN	0	0	Median	0	0	0	656	236	608	1046	1980	1980	237;238	1	9606
MEKPPAPPSLPAGPPGVK	2	0	Oxidation (M)	1784.9495	0.94949134	211	Q15428	SF3A2	Splicing factor 3A subunit 2	yes	yes	0	1	1	3	0			1			17.325	17.325	3	0.018274	10220	DP1134_3	81.01	47.325			NaN	NaN	NaN	0	0	Median	16091000	16091000	0	657	211	609	1047	1981	1981	218	1	9606
MESLLQHLDR	0	1	Acetyl (Protein N-term);Oxidation (M)	1298.6289	0.62888548	253	Q9NPI8	FANCF	Fanconi anemia group F protein	yes	yes	1	1	0	4	0				1		18.578	18.578	2	0.02602	12359	DP1134_4	56.721	23.682			NaN	NaN	NaN	0	0	Median	1285200000	0	1285200000	658	253	610	1048	1982	1982	271	1	9606
METRSSKTR	1	2	Acetyl (Protein N-term);Oxidation (M)	1152.5557	0.55572054	264	Q9Y238	DLEC1	Deleted in lung and esophageal cancer protein 1	yes	yes	1	1	2	4	0				1		19.463	19.463	2	0.034212	13751	DP1134_4	41.029	6.8565			NaN	NaN	NaN	0	0	Median	22202000	22202000	0	659	264	611	1049	1983	1983	285	1	9606
MEVKPPPGRPQPDSGR	1	2	Acetyl (Protein N-term);Oxidation (M)	1804.889	0.88901635	141	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	yes	yes	1	1	2	3	0			1			14.711	14.711	3	0.0018236	5752	DP1134_3	76.82	56.771			1.5235	1.4924	NaN	1	0	Median	57050000	22353000	34697000	660	141	612	1050	1984;1985	1984	132	2	9606
MFGGPGTASRPSSSR	0	2	Oxidation (M)	1509.6994	0.69942466	69	P08670	VIM	Vimentin	yes	yes	0	1	1	3	0			2			14.281	14.281	3	0.0074807	5305	DP1134_3	90.697	41.508			NaN	NaN	NaN	0	0	Median	9864500	9864500	0	661	69	613	1051;1052	1986;1987	1986	78	2	9606
MFVGGLSWDTSK	1	0	Unmodified	1326.6278	0.62782285	245	Q99729	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B	yes	yes	0	0	0	3	0			1			20.824	20.824	2	0.01844	15653	DP1134_3	102.52	66.077			NaN	NaN	NaN	0	0	Median	24402000	0	24402000	662	245	614	1053	1988	1988		1	9606
MFVGGLSWDTSKK	2	0	Oxidation (M)	1470.7177	0.71770049	245	Q99729	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B	yes	yes	0	1	1	3	0			1			18.527	18.527	2	0.0014595	12075	DP1134_3	113.93	56.337			NaN	NaN	NaN	0	0	Median	76071000	0	76071000	663	245	615	1054	1989	1989	258	1	9606
MGAGMGFGLER	0	1	2 Oxidation (M)	1156.5005	0.50051385	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	2	0	2	0		1				17.144	17.144	2	0.024983	10348	DP1134_2	90.15	69.451			NaN	NaN	NaN	0	0	Median	33042000	0	33042000	664	142	616	1055	1990	1990	137;138	1	9606
MGALLLLSHLGRR	0	2	Oxidation (M)	1451.8395	0.83948738	242	Q96S37	SLC22A12	Solute carrier family 22 member 12	yes	yes	0	1	1	2	0		1				18.411	18.411	2	0.035662	12597	DP1134_2	75.378	31.743			NaN	NaN	NaN	0	0	Median	23753000	23753000	0	665	242	617	1056	1991	1991	253	1	9606
MGAMAKPDCIITCDGK	2	0	2 Oxidation (M)	1798.7722	0.77219695	188	Q01469	FABP5	Fatty acid-binding protein, epidermal	yes	yes	0	2	1	5	0					1	15.483	15.483	3	0.025027	6869	DP1134_5	68.751	50.113			NaN	NaN	NaN	0	0	Median	8064800	8064800	0	666	188	618	1057	1992	1992	170;171	1	9606
MGGMEGPFGGGMENMGR	0	1	4 Oxidation (M)	1777.6528	0.6528101	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	4	0	2	0		1				16.144	16.144	2	0.012567	8724	DP1134_2	79.492	68.395			NaN	NaN	NaN	0	0	Median	2923200	2923200	0	667	142	619	1058	1993	1993	139;140;141;142	1	9606
MGMKHSSR	1	1	Acetyl (Protein N-term);2 Oxidation (M)	1006.4324	0.43243428	254	Q9NR22	PRMT8	Protein arginine N-methyltransferase 8	yes	yes	1	2	1	5	0					1	17.885	17.885	2	0.0359	10663	DP1134_5	40.573	14.189			NaN	NaN	NaN	0	0	Median	0	0	0	668	254	620	1059	1994	1994	272;273	1	9606
MGPAMGPALGAGIER	0	1	2 Oxidation (M)	1458.6959	0.69591919	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	2	0	2	0		1				17.207	17.207	2	5.2893E-08	10477	DP1134_2	124.12	108.92			0.39969	0.46717	NaN	1	0	Median	44915000	31824000	13091000	669	142	621	1060	1995	1995	143;144	1	9606
MGPLGLDHMASSIER	0	1	2 Oxidation (M)	1644.76	0.75997601	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	2	0	2	0		1				16.896	16.896	3	9.1942E-10	9985	DP1134_2	131.08	111.5			0.49685	0.58073	NaN	1	0	Median	50355000	32916000	17439000	670	142	622	1061	1996;1997;1998	1996	145;146	3	9606
MGVPRAREGR	0	3	Acetyl (Protein N-term);Oxidation (M)	1185.6037	0.60367378	221	Q6ZSN1		Putative uncharacterized protein FLJ45355	yes	yes	1	1	2	1	0	1					22.413	22.413	2	0.027296	17141	DP1134_1	64.265	10.297			NaN	NaN	NaN	0	0	Median	0	0	0	671	221	623	1062	1999	1999	224	1	9606
MGWEQETQK	1	0	Acetyl (Protein N-term);Oxidation (M)	1193.5023	0.50228799	215	Q4G0G2	H1FX-AS1	Putative uncharacterized protein H1FX-AS1	yes	yes	1	1	0	3	0			1			18.828	18.828	2	0.035049	12752	DP1134_3	42.869	12.551			NaN	NaN	NaN	0	0	Median	13237000	0	13237000	672	215	624	1063	2000	2000	221	1	9606
MHEGDEGPGHHHKPGLGEGTP	1	0	Oxidation (M)	2190.9501	0.95011305	60	P06702	S100A9	Protein S100-A9	yes	yes	0	1	1	5	0					2	13.983	13.983	3;4	0.0030393	4741	DP1134_5	92.236	59.547			NaN	NaN	NaN	0	0	Median	72415000	72415000	0	673	60	625	1064;1065	2001;2002;2003	2002	68	3	9606
MHEGDEGPGHHHKPGLGEGTP	1	0	Unmodified	2174.9552	0.95519843	60	P06702	S100A9	Protein S100-A9	yes	yes	0	0	1	5	0					1	14.361	14.361	3	0.015994	5195	DP1134_5	86.222	56.8			NaN	NaN	NaN	0	0	Median	14464000	14464000	0	674	60	625	1066	2004	2004		1	9606
MHLYLGAAK	1	0	Unmodified	1002.5321	0.53207197	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					17.168	17.168	2	0.015125	9182	DP1134_1	114.19	67.729			0.55041	0.66511	NaN	1	0	Median	162290000	101840000	60448000	675	28;199	626	1067	2005	2005		1	9606
MHNQIPQVTSDGKR	1	1	Oxidation (M)	1625.7944	0.79438768	232	Q92499	DDX1	ATP-dependent RNA helicase DDX1	yes	yes	0	1	1	2	0		1				14.285	14.285	3	0.032855	5990	DP1134_2	53.869	23.846			NaN	NaN	NaN	0	0	Median	518940	0	518940	676	232	627	1068	2006	2006	232	1	9606
MHSNSQDKEVTILAEGR	1	1	Unmodified	1913.9265	0.92652407	229	Q8TCU4	ALMS1	Alstrom syndrome protein 1	yes	yes	0	0	1	5	0					1	18.385	18.385	2	0.0063866	11456	DP1134_5	92.247	28.022			NaN	NaN	NaN	0	0	Median	0	0	0	677	229	628	1069	2007	2007		1	9606
MIAGQVLDINLAAEPK	1	0	Oxidation (M)	1697.9022	0.9022068	67	P07910	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	yes	yes	0	1	0	3	0			1			20.263	20.263	2	0.0078552	14744	DP1134_3	123.26	76.301			NaN	NaN	NaN	0	0	Median	0	0	0	678	67	629	1070	2008	2008	77	1	9606
MISAAQLLDELMGR	0	1	Acetyl (Protein N-term);Oxidation (M)	1604.7902	0.79021351	41	O95232	LUC7L3	Luc7-like protein 3	yes	yes	1	1	0	1	0	1					19.498	19.498	2	0.03468	12710	DP1134_1	46.606	22.619			0.47181	0.58278	NaN	1	0	Median	10429000	6673300	3756000	679	41	630	1071	2009	2009	47	0	9606
MKALDAEDGKR	2	1	Oxidation (M)	1248.6132	0.61323542	234	Q92738	USP6NL	USP6 N-terminal-like protein	yes	yes	0	1	2	1	0	1					15.449	15.449	3	0.02822	6256	DP1134_1	64.82	19.54			NaN	NaN	NaN	0	0	Median	0	0	0	680	234	631	1072	2010	2010	235	1	9606
MKETAENYLGHTAK	2	0	Oxidation (M)	1607.7614	0.76135622	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	1	1	2	0		1				14.705	14.705	3	0.0021404	6622	DP1134_2	70.134	48.32			1.6086	1.5954	NaN	1	0	Median	46232000	15726000	30506000	681	122	632	1073	2011	2011	125	1	9606
MLGTEGGEGFVVK	1	0	Acetyl (Protein N-term)	1364.6646	0.66460229	113	P31943	HNRNPH1	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed	yes	yes	1	0	0	3	0			1			22.011	22.011	2	0.012605	17509	DP1134_3	77.533	32.372			NaN	NaN	NaN	0	0	Median	10679000	0	10679000	682	113	633	1074	2012	2012		1	9606
MLHLHGWQTMQGR	0	1	Acetyl (Protein N-term);Oxidation (M)	1651.7711	0.77114982	224	Q8NBV8	SYT8	Synaptotagmin-8	yes	yes	1	1	0	5	0					1	14.429	14.429	3	0.035825	5274	DP1134_5	47.429	9.6361			NaN	NaN	NaN	0	0	Median	0	0	0	683	224	634	1075	2013	2013	226	1	9606
MMESPERK	1	1	2 Oxidation (M)	1038.4474	0.44741564	258	Q9P1A6	DLGAP2	Disks large-associated protein 2	yes	yes	0	2	1	2	0		1				26.779	26.779	2	0.033046	24449	DP1134_2	54.525	17.505			NaN	NaN	NaN	0	0	Median	0	0	0	684	258	635	1076	2014	2014	276;277	1	9606
MMLGTEGGEGFVVK	1	0	Acetyl (Protein N-term)	1495.7051	0.70508689	113	P31943	HNRNPH1	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed	yes	yes	1	0	0	3	0			1			23.068	23.068	2	1.3625E-06	19010	DP1134_3	130.41	88.536			NaN	NaN	NaN	0	0	Median	6164300	0	6164300	685	113	636	1077	2015;2016	2015		2	9606
MMYGVSPWGDSPIDFEDSAHVPCPR	0	1	Oxidation (M)	2865.2197	0.2196709	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					21.326	21.326	3	1.5162E-62	15586	DP1134_1	167.89	163.3			0.23643	0.29204	NaN	1	0	Median	46974000	39207000	7767100	686	199	637	1078	2017;2018;2019	2019	192;193	3	9606
MMYGVSPWGDSPIDFEDSAHVPCPR	0	1	2 Oxidation (M)	2881.2146	0.21458552	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	2	0	1	0	1					20.97	20.97	3	0.0048291	15107	DP1134_1	67.992	55.559			NaN	NaN	NaN	0	0	Median	122230000	122230000	0	687	199	637	1079	2020;2021	2020	192;193	2	9606
MMYGVSPWGDSPIDFEDSAHVPCPR	0	1	Unmodified	2849.2248	0.22475628	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					21.78	21.78	3	3.1892E-06	16273	DP1134_1	127.5	112.2			NaN	NaN	NaN	0	0	Median	25832000	25832000	0	688	199	637	1080	2022;2023	2022		2	9606
MPCTEDYLSLILNR	0	1	Oxidation (M)	1739.8222	0.82224192	13	CON__P02769			yes	yes	0	1	0	3	1.31	1	2	1	2	1	22.708	22.708	2;3	2.0787E-256	17648	DP1134_1	266.17	204.35		+	NaN	NaN	NaN	0	0	Median	168270000	168270000	0	689	13	638	1081;1082;1083;1084;1085;1086;1087	2024;2025;2026;2027;2028;2029;2030;2031;2032;2033;2034;2035;2036;2037;2038;2039	2026	11	16	
MPCTEDYLSLILNR	0	1	Unmodified	1723.8273	0.82732729	13	CON__P02769			yes	yes	0	0	0	2.4	1.02	1	2	1	1		23.241	23.241	2;3	0	19693	DP1134_2	304.7	245.44		+	NaN	NaN	NaN	0	0	Median	66959000	66959000	0	690	13	638	1088;1089;1090;1091;1092	2040;2041;2042;2043;2044;2045;2046;2047;2048	2042		9	
MPVERMR	0	2	Oxidation (M)	933.45244	0.45244144	82	P14316	IRF2	Interferon regulatory factor 2	yes	yes	0	1	1	5	0					1	21.612	21.612	1	0.03201	16318	DP1134_5	48.242	7.6692			NaN	NaN	NaN	0	0	Median	39955000	39955000	0	691	82	639	1093	2049	2049	101	1	9606
MPVIKPDIANWELSVK	2	0	Oxidation (M)	1854.9914	0.99135615	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	1	2	0		1				20.085	20.085	3	2.9647E-12	15121	DP1134_2	135.61	95.8			0.35514	0.35712	NaN	1	0	Median	20562000	14725000	5836800	692	56	640	1094	2050	2050	61	1	9606
MPVIKPDIANWELSVK	2	0	Unmodified	1838.9964	0.99644153	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	1	2	0		1				20.847	20.847	3	3.8559E-09	16297	DP1134_2	130.95	115.76			0.39418	0.39985	NaN	1	0	Median	12330000	8546100	3784200	693	56	640	1095	2051	2051		1	9606
MQEMLQRMKQQMQDQ	1	1	3 Oxidation (M)	1999.8584	0.8583862	244	Q99719	SEPT5	Septin-5	yes	yes	0	3	2	5	0					1	19.283	19.283	2	0.034382	12893	DP1134_5	45.257	7.236			NaN	NaN	NaN	0	0	Median	0	0	0	694	244	641	1096	2052	2052	254;255;256	1	9606
MQLDNPSKVQQAELHTGSLPR	1	1	Oxidation (M)	2364.1856	0.1855923	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	2					16.872	16.872	3;4	7.0692E-09	8650	DP1134_1	122.19	100.33			0.39739	0.47943	24.869	2	0	Median	81737000	57365000	24372000	695	199	642	1097;1098	2053;2054;2055;2056	2055	194	4	9606
MRPGVACSVSQAQK	1	1	Oxidation (M)	1533.7392	0.73918099	115	P32969	RPL9	60S ribosomal protein L9	yes	yes	0	1	1	4	0				1		13.981	13.981	3	0.0012061	5137	DP1134_4	105.99	60.634			0.40243	0.43242	NaN	1	0	Median	1952000	1410600	541410	696	115	643	1099	2057;2058	2057	118	2	9606
MSATFIGNSTAIQELFK	1	0	Oxidation (M)	1872.9291	0.92914983	179	P68371	TUBB4B	Tubulin beta-4B chain	no	no	0	1	0	3	0			1			22.402	22.402	2	1.6557000000000001E-211	17995	DP1134_3	243.4	22.873			0.48924	0.59735	NaN	1	0	Median	17855000	11295000	6560400	697	179	644	1100	2059;2060	2059	166	2	9606
MSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQR	0	1	2 Oxidation (M)	3742.6814	0.6814147	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	2	0	1	0	1					20.573	20.573	4	3.2986E-06	14574	DP1134_1	64.002	50.072			NaN	NaN	NaN	0	0	Median	64180000	64180000	0	698	199	645	1101	2061	2061	195;196	1	9606
MSGECAPNVSVSVSTSHTTISGGGSR	0	1	Oxidation (M)	2580.1544	0.1544281	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	1	0	2	0.816	1	1	1			16.747	16.747	3	6.0425E-167	8479	DP1134_1	231.75	193.39		+	NaN	NaN	NaN	0	0	Median	368100000	368100000	0	699	51	646	1102;1103;1104	2062;2063;2064;2065;2066	2062	53	5	9606
MSGECAPNVSVSVSTSHTTISGGGSR	0	1	Unmodified	2564.1595	0.15951348	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	1.5	0.5	1	1				17.108	17.108	3	2.5441E-68	8957	DP1134_1	186.7	164.94		+	NaN	NaN	NaN	0	0	Median	95770000	95770000	0	700	51	646	1105;1106	2067;2068;2069	2067		3	9606
MSPSMLTGNSPR	0	1	Acetyl (Protein N-term);Oxidation (M)	1334.5959	0.59587079	214	Q496A3	SPATS1	Spermatogenesis-associated serine-rich protein 1	yes	yes	1	1	0	4	0				1		15.717	15.717	3	0.030645	7632	DP1134_4	44.564	14.233			NaN	NaN	NaN	0	0	Median	5456100	5456100	0	701	214	647	1107	2070	2070	220	1	9606
MSSTFIGNSTAIQELFKR	1	1	Unmodified	2029.0303	0.030260856	201	Q13509	TUBB3	Tubulin beta-3 chain	yes	yes	0	0	1	3	0			1			21.272	21.272	3	0.023209	16186	DP1134_3	41.367	4.6151			0.90214	1.0442	NaN	1	0	Median	20288000	10123000	10164000	702	201	648	1108	2071	2071		1	9606
MTLDDFR	0	1	Oxidation (M)	912.40112	0.40111738	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	1	0	1	0	1					17.224	17.224	2	1.3623E-08	9348	DP1134_1	153.88	107.12		+	NaN	NaN	NaN	0	0	Median	65644000	65644000	0	703	17	649	1109	2072	2072	23	1	9606
MTLVSFFSFLSK	1	0	Acetyl (Protein N-term);Oxidation (M)	1463.737	0.73703895	228	Q8NGH7	OR52L1	Olfactory receptor 52L1	yes	yes	1	1	0	4	0				1		17.478	17.478	2	0.03036	10245	DP1134_4	44.309	11.895			NaN	NaN	NaN	0	0	Median	2967900	0	2967900	704	228	650	1110	2073	2073	229	1	9606
MVAAVACAQVPK	1	0	Oxidation (M)	1259.6366	0.6366134	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3	0			1			16.005	16.005	2	0.00021572	8099	DP1134_3	120.87	57.684			0.51128	0.62426	NaN	1	0	Median	252160000	161630000	90534000	705	251	651	1111	2074;2075;2076	2074	265	3	9606
MVAAVACAQVPK	1	0	Unmodified	1243.6417	0.64169877	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			16.875	16.875	2	0.00047622	9518	DP1134_3	112.84	112.84			0.43364	0.52946	NaN	1	0	Median	167240000	115460000	51788000	706	251	651	1112	2077;2078;2079;2080	2079		4	9606
MVLLTMIAR	0	1	Acetyl (Protein N-term);Oxidation (M)	1104.6035	0.60352235	37	O75396	SEC22B	Vesicle-trafficking protein SEC22b	yes	yes	1	1	0	3	0			1			16.189	16.189	2	0.035341	7939	DP1134_3	44.117	19.223			0.51295	0.62705	NaN	1	0	Median	27039000	17660000	9379500	707	37	652	1113	2081	2081	41	0	9606
MVPAGMGAGLER	0	1	Unmodified	1187.5791	0.57909852	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	0	2	0		1				17.721	17.721	2	0.017266	11380	DP1134_2	64.73	29.078			0.68599	0.80181	NaN	1	0	Median	24063000	17408000	6655300	708	142	653	1114	2082	2082		1	9606
MVPAGMGAGLER	0	1	Oxidation (M)	1203.574	0.57401314	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	1	0	2	0		1				17.043	17.043	2	0.031186	10688	DP1134_2	77.732	50.478			0.30941	0.36164	NaN	1	0	Median	22576000	16843000	5733700	709	142	653	1115	2083	2083	147	0	9606
MVQEAEKYKAEDEVQR	2	1	Oxidation (M)	1967.9259	0.92585536	74	P0DMV8;P0DMV9	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	yes	no	0	1	2	2	0		1				14.618	14.618	3	0.00069904	6521	DP1134_2	91.789	72.627			0.95406	1.0403	NaN	1	0	Median	21514000	11668000	9845700	710	74	654	1116	2084;2085	2084	81	2	9606
MVVMHGYKAVK	2	0	2 Oxidation (M)	1293.6573	0.65734884	58	P05181	CYP2E1	Cytochrome P450 2E1;Cytochrome P450 2E1, N-terminally processed	yes	yes	0	2	1	4	0				1		19.431	19.431	2	0.016884	13651	DP1134_4	91.9	51.899			NaN	NaN	NaN	0	0	Median	0	0	0	711	58	655	1117	2086	2086	66;67	1	9606
MYWQNWTHNGR	0	1	Acetyl (Protein N-term);Oxidation (M)	1549.6521	0.65208054	219	Q6AWC8		Putative uncharacterized protein LOC100129027	yes	yes	1	1	0	1	0	1					24.302	24.302	2	0.035338	19941	DP1134_1	53.493	26.066			NaN	NaN	NaN	0	0	Median	0	0	0	712	219	656	1118	2087	2087	222	1	9606
NAHSATTWSGQYVGGAEAR	0	1	Unmodified	1961.898	0.89800113	25	CON__Streptavidin			yes	yes	0	0	0	3.2	1.54	2	2	1	2	3	18.977	18.977	2;3;4	0	8505	DP1134_1	382.95	327.23		+	NaN	NaN	NaN	0	0	Median	13774000000	13774000000	0	713	25	657	1119;1120;1121;1122;1123;1124;1125;1126;1127;1128	2088;2089;2090;2091;2092;2093;2094;2095;2096;2097;2098;2099;2100;2101;2102;2103;2104;2105	2090		18	
NAVITVPAYFNDSQR	0	1	Unmodified	1693.8424	0.84238373	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2	0		1				20.156	20.156	2	1.3111E-61	15137	DP1134_2	186.76	156.96			2.2657	2.6482	NaN	1	0	Median	26341000	8512500	17829000	714	122	658	1129	2106	2106		1	9606
NFGIGQDIQPK	1	0	Unmodified	1215.6248	0.62478638	164	P62424	RPL7A	60S ribosomal protein L7a	yes	yes	0	0	0	4	0				1		18.242	18.242	2	0.01926	11771	DP1134_4	120.31	53.386			NaN	NaN	NaN	0	0	Median	0	0	0	715	164	659	1130	2107	2107		1	9606
NFILDQTNVSAAAQR	0	1	Unmodified	1646.8376	0.8376327	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	0	2	0		1				19.211	19.211	2	0.014483	13840	DP1134_2	61.435	46.424			0.99904	1.1677	NaN	1	0	Median	42386000	20177000	22208000	716	186	660	1131	2108	2108		1	9606
NFYFLEMNTR	0	1	Unmodified	1333.6125	0.61250714	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				21.638	21.638	2	0.014521	17413	DP1134_2	97.431	61.049			0.58743	0.6866	NaN	1	0	Median	12843000	7999800	4843500	717	56	661	1132	2109	2109		1	9606
NGIAFMGPPSQAMWALGDK	1	0	Oxidation (M)	2005.939	0.93900301	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					21.515	21.515	2	0.0019868	15905	DP1134_1	100.4	78.069			0.41184	0.49766	NaN	1	0	Median	38758000	28465000	10293000	718	199	662	1133	2110;2111;2112	2111	197	3	9606
NGQDLGVAFK	1	0	Unmodified	1047.5349	0.53490874	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	0	2	0		1				17.677	17.677	2	4.3462E-47	11217	DP1134_2	196.99	148.43			NaN	NaN	NaN	0	0	Median	0	0	0	719	186	663	1134	2113	2113		1	9606
NGQPESEDKYGTTPPQLDADSSYFLYSK	2	0	Unmodified	3136.4149	0.41491935	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	0	1	3	0			1			20.004	20.004	3	4.0196E-12	14391	DP1134_3	134.81	111.25		+	NaN	NaN	NaN	0	0	Median	26018000	26018000	0	720	5;6	664	1135	2114	2114		1	
NHPGLLLMDTTFR	0	1	Unmodified	1513.7711	0.77113304	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				20.353	20.353	3	9.856100000000001E-192	14106	DP1134_1	196.27	126.6			0.4517	0.52796	NaN	1	0	Median	221720000	207160000	14562000	721	78	665	1136;1137	2115;2116	2115		2	9606
NHPGLLLMDTTFR	0	1	Oxidation (M)	1529.766	0.76604767	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	2	0		1				19.006	19.006	3	1.9976E-11	13365	DP1134_2	141.58	121.49			0.51016	0.59629	NaN	1	0	Median	39391000	25398000	13994000	722	78	665	1138	2117;2118;2119	2118	97	3	9606
NIDEHANEDVER	0	1	Unmodified	1439.6277	0.62769951	149	P61026	RAB10	Ras-related protein Rab-10	yes	yes	0	0	0	4	0				1		14.251	14.251	3	0.003595	5501	DP1134_4	105.03	79.051			NaN	NaN	NaN	0	0	Median	932660	932660	0	723	149	666	1139	2120	2120		1	9606
NIETIINTFHQYSVK	1	0	Unmodified	1805.9312	0.93119874	60	P06702	S100A9	Protein S100-A9	yes	yes	0	0	0	4.67	0.471				1	2	21.567	21.567	2;3	1.8972E-176	16326	DP1134_5	237.41	166.92			NaN	NaN	NaN	0	0	Median	348870000	348870000	0	724	60	667	1140;1141;1142	2121;2122;2123;2124	2122		4	9606
NIGVDNPAAK	1	0	Unmodified	997.51926	0.51925868	181	P78371	CCT2	T-complex protein 1 subunit beta	yes	yes	0	0	0	3	0			1			15.238	15.238	2	0.023813	6602	DP1134_3	73.248	24.493			1.0544	1.2874	NaN	1	0	Median	12895000	6484300	6410800	725	181	668	1143	2125	2125		0	9606
NIPLLFLQNITGFMVGR	0	1	Oxidation (M)	1948.0604	0.060438772	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3	0			1			24.978	24.978	2	5.9427E-44	21827	DP1134_3	168.82	168.82			0.39391	0.48153	NaN	1	0	Median	8608000	5228800	3379200	726	251	669	1144	2126;2127;2128;2129;2130;2131	2128	266	6	9606
NIPLLFLQNITGFMVGR	0	1	Unmodified	1932.0655	0.06552415	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			26.476	26.476	2	0.00034914	23841	DP1134_3	115.57	59.17			NaN	NaN	NaN	0	0	Median	0	0	0	727	251	669	1145	2132	2132		1	9606
NITYLPAGQSVLLQLPQ	0	0	Unmodified	1854.0251	0.025099124	117	P35232	PHB	Prohibitin	yes	yes	0	0	0	4	0				1		23.548	23.548	2	8.408100000000001E-63	19836	DP1134_4	190.66	124.47			NaN	NaN	NaN	0	0	Median	0	0	0	728	117	670	1146	2133;2134	2134		2	9606
NKLEGLEDALQK	2	0	Unmodified	1356.7249	0.72489436	9;50	CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	1	3	0			1			18.325	18.325	3	4.9478E-05	11654	DP1134_3	99.539	42.191		+	NaN	NaN	NaN	0	0	Median	9181000	9181000	0	729	9;50	671	1147	2135	2135		1	9606
NKLNDLEDALQQAK	2	0	Unmodified	1598.8264	0.82639932	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	1	2	1	1		1			19.584	19.584	2	0	13029	DP1134_1	285.83	191.46		+	NaN	NaN	NaN	0	0	Median	51280000	51280000	0	730	51	672	1148;1149	2136;2137	2136		2	9606
NKLNDLEDALQQAKEDLAR	2	1	Unmodified	2183.1182	0.11822424	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	2	3	1.41	1	1	1	1	1	21.676	21.676	3	1.2243E-236	17417	DP1134_2	268.42	204.96		+	NaN	NaN	NaN	0	0	Median	140910000	140910000	0	731	51	673	1150;1151;1152;1153;1154	2138;2139;2140;2141;2142;2143;2144	2139		7	9606
NKLNDLEEALQQAK	2	0	Unmodified	1612.842	0.84204938	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	1	1.5	0.5	1	1				19.967	19.967	2	1.5541E-227	14747	DP1134_2	253.97	186.27		+	NaN	NaN	NaN	0	0	Median	12445000	12445000	0	732	18	674	1155;1156	2145;2146;2147	2147		3	9606
NKLNDLEEALQQAKEDLAR	2	1	Unmodified	2197.1339	0.1338743	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	2	2.33	1.25	1	1		1		21.866	21.866	3	2.0834E-64	16464	DP1134_1	206.63	150.66		+	NaN	NaN	NaN	0	0	Median	16336000	16336000	0	733	18	675	1157;1158;1159	2148;2149;2150;2151	2149		4	9606
NLATTVTEEILEK	1	0	Unmodified	1459.777	0.77698951	33	O43390	HNRNPR	Heterogeneous nuclear ribonucleoprotein R	yes	yes	0	0	0	2	0		1				22.29	22.29	2	0.0050537	18324	DP1134_2	110.39	65.407			NaN	NaN	NaN	0	0	Median	5357500	0	5357500	734	33	676	1160	2152	2152		1	9606
NLDDGIDDERLR	0	2	Unmodified	1429.6797	0.67973508	79	P11940;Q9H361	PABPC1;PABPC3	Polyadenylate-binding protein 1;Polyadenylate-binding protein 3	yes	no	0	0	1	2	0		1				17.309	17.309	2	9.7583E-56	10579	DP1134_2	188.91	130.32			NaN	NaN	NaN	0	0	Median	2812100	0	2812100	735	79	677	1161	2153	2153		1	9606
NLDIERPTYTNLNR	0	2	Unmodified	1717.8747	0.87474649	178;246	P68363;P68366;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q6PEY2	TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA8;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain	no	no	0	0	1	3	0			2			17.824	17.824	2;3	5.1004E-13	11030	DP1134_3	141.34	81.925			NaN	NaN	NaN	0	0	Median	400150000	400150000	0	736	178;246	678	1162;1163	2154;2155	2155		2	9606
NLDLDSIIAEVK	1	0	Unmodified	1328.7187	0.71874635	18;9;50;16	CON__P35908v2;CON__P35908;P35908;CON__Q5XKE5;Q5XKE5;CON__P13647;P13647;CON__P02538;P02538;CON__P48668;CON__P04259;P48668;CON__Q8VED5;P04259	KRT2;KRT79;KRT5;KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	0	4.5	0.5				1	1	22.686	22.686	2	2.0954000000000002E-70	17956	DP1134_5	198.25	137.34		+	NaN	NaN	NaN	0	0	Median	25189000	25189000	0	737	18;16;9;50	679	1164;1165	2156;2157;2158;2159	2158		4	9606
NLLVTMLIDQLCGR	0	1	Oxidation (M)	1660.864	0.86404715	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					24.255	24.255	2	0.0043331	19802	DP1134_1	85.288	39.38			0.6697	0.82722	NaN	1	0	Median	5050400	3015400	2035000	738	199	680	1166	2160;2161;2162;2163	2161	198	4	9606
NLPFDFTWK	1	0	Unmodified	1166.576	0.57604528	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	0	2	0		1				22.546	22.546	2	0.016701	18644	DP1134_2	90.601	70.604			0.56422	0.68864	NaN	1	0	Median	11124000	7529000	3594600	739	142	681	1167	2164;2165;2166	2165		3	9606
NLVPGESVYGEKR	1	1	Unmodified	1446.7467	0.74669243	97	P22087	FBL	rRNA 2'-O-methyltransferase fibrillarin	yes	yes	0	0	1	3	0			1			16.594	16.594	3	0.033814	8917	DP1134_3	55.196	34.733			NaN	NaN	NaN	0	0	Median	0	0	0	740	97	682	1168	2167	2167		1	9606
NMQDMVEDYR	0	1	2 Oxidation (M)	1331.5122	0.51220074	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	2	0	2.5	1.12	1	1	1	1		15.508	15.508	2	0.004235	7723	DP1134_2	121.5	107.2		+	NaN	NaN	NaN	0	0	Median	120380000	120380000	0	741	51	683	1169;1170;1171;1172	2168;2169;2170;2171;2172	2169	51;52	5	9606
NMQDMVEDYR	0	1	Oxidation (M)	1315.5173	0.51728612	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	1	0	2	0		1				17.144	17.144	2	0.014731	10337	DP1134_2	120.31	92.293		+	NaN	NaN	NaN	0	0	Median	45591000	45591000	0	742	51	683	1173	2173	2173	51;52	1	9606
NMSVHLSPCFR	0	1	Oxidation (M)	1362.6173	0.61727494	161	P62280	RPS11	40S ribosomal protein S11	yes	yes	0	1	0	4	0				1		16.753	16.753	3	0.018483	9288	DP1134_4	51.727	33.459			0.53024	0.54599	NaN	1	0	Median	43738000	26137000	17600000	743	161	684	1174	2174	2174	156	1	9606
NNYRNAHSATTWSGQYVGGAEAR	0	2	Unmodified	2509.1483	0.14829559	25	CON__Streptavidin			yes	yes	0	0	1	5	0					1	16.46	16.46	4	0.0068012	8467	DP1134_5	87.326	65.659		+	NaN	NaN	NaN	0	0	Median	11642000	11642000	0	744	25	685	1175	2175	2175		1	
NQVALNPQNTVFDAK	1	0	Unmodified	1657.8424	0.84238373	74	P0DMV8;P0DMV9	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	yes	no	0	0	0	2	0		1				18.711	18.711	2	2.2425E-77	13015	DP1134_2	199.12	175.45			0.94724	1.1561	NaN	1	0	Median	88193000	51543000	36650000	745	74	686	1176	2176;2177;2178	2176		3	9606
NQVALNPQNTVFDAKR	1	1	Unmodified	1813.9435	0.94349476	74	P0DMV8;P0DMV9	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	yes	no	0	0	1	2	0		1				17.728	17.728	3	0.0011721	11225	DP1134_2	78.69	60.594			0.93715	0.95728	NaN	1	0	Median	23344000	11365000	11979000	746	74	687	1177	2179;2180	2179		2	9606
NQVSLTCLVK	1	0	Unmodified	1160.6223	0.62234354	45;47;46	P01857;P01860;P01859	IGHG1;IGHG3;IGHG2	Ig gamma-1 chain C region;Ig gamma-3 chain C region;Ig gamma-2 chain C region	no	no	0	0	0	3	0			1			18.727	18.727	2	9.8201E-05	12408	DP1134_3	132.76	82.733			NaN	NaN	NaN	0	0	Median	206660000	206660000	0	747	45;47;46	688	1178	2181	2181		1	9606
NSMHVDMADEAYSIGPAPSQQSYLSMEK	1	0	Oxidation (M)	3101.3416	0.34163653	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		1				19.407	19.407	3	2.5889E-07	14038	DP1134_2	120.72	107.9			NaN	NaN	NaN	0	0	Median	6149600	6149600	0	748	241	689	1179	2182	2182	249	1	9606
NSSYFVEWIPNNVK	1	0	Unmodified	1695.8257	0.82567103	66;179;201	P07437;Q9BUF5;P68371;P04350;Q13509	TUBB;TUBB6;TUBB4B;TUBB4A;TUBB3	Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain	no	no	0	0	0	3	0			1			21.615	21.615	2	3.1906E-49	16719	DP1134_3	181.53	158.16			0.41533	0.50711	NaN	1	0	Median	34688000	23360000	11328000	749	66;179;201	690	1180	2183;2184;2185	2184		3	9606
NSVSNFLHSLER	0	1	Unmodified	1401.7001	0.70007659	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					20.673	20.673	2;3	4.2009E-23	14631	DP1134_1	160.72	133.29			0.64927	0.80198	6.0429	2	0	Median	1001899999.9999999	600100000	401790000	750	199	691	1181;1182	2186;2187;2188;2189;2190;2191	2186		6	9606
NSWQEGDTYTCVVMHEALHNHYTQK	1	0	Oxidation (M)	3063.324	0.32395305	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	1	0	3	0			2			18.125	18.125	4;5	1.9587E-05	11459	DP1134_3	123.17	104.4		+	NaN	NaN	NaN	0	0	Median	180580000	180580000	0	751	5;6	692	1183;1184	2192;2193;2194	2193	1	3	
NSWQEGDTYTCVVMHEALHNHYTQK	1	0	Unmodified	3047.329	0.32903843	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	0	0	3	0			1			19.428	19.428	4	0.018348	13604	DP1134_3	57.216	44.123		+	NaN	NaN	NaN	0	0	Median	32620000	32620000	0	752	5;6	692	1185	2195	2195		1	
NTKQEIAEINR	1	1	Unmodified	1314.6892	0.68917755	9;50	CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	1	3	0			1			14.982	14.982	3	0.00028886	6448	DP1134_3	129.74	49.572		+	NaN	NaN	NaN	0	0	Median	34796000	34796000	0	753	9;50	693	1186	2196	2196		1	9606
NVQLQENEIR	0	1	Unmodified	1241.6364	0.6364137	121	P36873	PPP1CC	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit	yes	yes	0	0	0	3	0			1			16.505	16.505	2	9.8201E-05	8938	DP1134_3	132.76	88.641			NaN	NaN	NaN	0	0	Median	227130000	0	227130000	754	121	694	1187	2197	2197		1	9606
NVSTGDVNVEMNAAPGVDLTQLLNNMR	0	1	Oxidation (M)	2887.3804	0.3804053	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	1	0	1.75	1.3	3			1		23.169	23.169	2;3	8.6797E-54	18325	DP1134_1	179.74	137.5		+	NaN	NaN	NaN	0	0	Median	12366000	12366000	0	755	15	695	1188;1189;1190;1191	2198;2199;2200;2201;2202;2203;2204	2200	17;18	7	9606
NVSTGDVNVEMNAAPGVDLTQLLNNMR	0	1	2 Oxidation (M)	2903.3753	0.37531992	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	2	0	2	0		2				21.592	21.592	2;3	1.1335E-09	17351	DP1134_2	105.04	77.52		+	0.56164	0.65646	NaN	1	0	Median	21217000	15615000	5601500	756	15	695	1192;1193	2205;2206;2207	2205	17;18	3	9606
NVTLTNEQAVQTDSASLDTVPEASK	1	0	Unmodified	2617.2719	0.27188393	271				yes	yes	0	0	0	1	0	1					21.868	21.868	3	0.027605	16295	DP1134_1	47.281	7.0833	+		NaN	NaN	NaN	0	0	Median	15725000	0	15725000	757	271	696	1194	2208	2208		1	9606
PALSRWASLPGPSMR	0	2	Acetyl (Protein N-term);Oxidation (M)	1682.8563	0.85625966	70	P09172	DBH	Dopamine beta-hydroxylase;Soluble dopamine beta-hydroxylase	yes	yes	1	1	1	1	0	1					23.286	23.286	2	0.035497	18443	DP1134_1	43.77	9.6833			NaN	NaN	NaN	0	0	Median	0	0	0	758	70	697	1195	2209	2209	79	1	9606
PGASLPPLDLQALEK	1	0	Unmodified	1547.8559	0.85590853	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				21.244	21.244	2	0.0037369	15733	DP1134_1	89.403	73.15			0.31792	0.3861	2.6098	2	0	Median	54958000	42040000	12919000	759	78	698	1196;1197	2210;2211;2212	2211		3	9606
PIKPSPPYFGLLLASVGR	1	1	Unmodified	1911.0982	0.098204487	88	P17812	CTPS1	CTP synthase 1	yes	yes	0	0	1	2	0		1				22.649	22.649	3	0.007117	18870	DP1134_2	105.79	80.882			NaN	NaN	NaN	0	0	Median	2377700	2377700	0	760	88	699	1198	2213;2214	2213		2	9606
PLFPHVLCHNCAVEFNFGQK	1	0	Unmodified	2413.146	0.14597609	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	0	2	0		1				20.426	20.426	4	0.00025151	15538	DP1134_2	71.402	61.92			0.82311	1.0046	NaN	1	0	Median	25967000	13407000	12560000	761	186	700	1199	2215;2216;2217	2215		3	9606
QAASSLQQASLK	1	0	Unmodified	1230.6568	0.65681479	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2	0		1				15.598	15.598	2	1.4225E-05	7876	DP1134_2	131.09	96.701			NaN	NaN	NaN	0	0	Median	18495000	0	18495000	762	122	701	1200	2218	2218		1	9606
QADVFPDRDHFGR	0	2	Unmodified	1558.7277	0.72768832	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3.4	0.49			3	2		16.789	16.789	2;3;4	4.0891000000000005E-123	9268	DP1134_3	205.59	167.62			0.46603	0.49188	15.455	5	0	Median	1487999999.9999998	997320000	490650000	763	251	702	1201;1202;1203;1204;1205	2219;2220;2221;2222;2223;2224;2225;2226;2227;2228;2229;2230;2231	2225		13	9606
QAVEMKNDKSEEEQSSSSVK	3	0	Unmodified	2239.0274	0.027419902	67	P07910	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	yes	yes	0	0	2	3	0			1			12.985	12.985	3	0.0035478	3722	DP1134_3	94.057	66.733			NaN	NaN	NaN	0	0	Median	1880500	0	1880500	764	67	703	1206	2232	2232		1	9606
QAVTNPNNTFYATK	1	0	Unmodified	1567.7631	0.76307078	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2	0		1				16.763	16.763	2	3.5445E-15	9844	DP1134_2	146.16	111.47			1.5494	1.8911	NaN	1	0	Median	49206000	21046000	28159000	765	122	704	1207	2233;2234;2235	2233		3	9606
QDHPSSMGVYGQESGGFSGPGENR	0	1	Oxidation (M)	2495.0408	0.040778555	189	Q01844	EWSR1	RNA-binding protein EWS	yes	yes	0	1	0	2	0		1				16.476	16.476	3	0.00040139	9409	DP1134_2	102.19	89.905			NaN	NaN	NaN	0	0	Median	26111000	0	26111000	766	189	705	1208	2236	2236	173	1	9606
QDIAFAYQR	0	1	Unmodified	1110.5458	0.54580778	65	P07355	ANXA2	Annexin A2	yes	yes	0	0	0	3	0			1			18.035	18.035	2	0.013711	11291	DP1134_3	132.08	63.702			NaN	NaN	NaN	0	0	Median	0	0	0	767	65	706	1209	2237	2237		1	9606
QEGIIFIGPPPSAIR	0	1	Unmodified	1593.8879	0.88787736	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2.5	0.5		1	1			21.204	21.204	2	0	16673	DP1134_2	295.26	246.07			0.2714	0.31722	NaN	1	0	Median	116360000	93426000	22932000	768	241	707	1210;1211	2238;2239;2240;2241;2242;2243;2244	2238		7	9606
QEPERNECFLSHKDDSPDLPK	2	1	Unmodified	2540.1602	0.16016541	13	CON__P02769			yes	yes	0	0	2	2	0		1				16.376	16.376	3	0.026476	9278	DP1134_2	66.264	31.241		+	NaN	NaN	NaN	0	0	Median	10051000	10051000	0	769	13	708	1212	2245	2245		1	
QEYDESGPSIVHR	0	1	Unmodified	1515.6954	0.69538514	146;175	P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39;P63261	ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	0	5	0					1	15.887	15.887	3	0.0011118	7393	DP1134_5	111.79	81.867			NaN	NaN	NaN	0	0	Median	10426000	10426000	0	770	146;175	709	1213	2246;2247	2246		2	9606
QEYEQLIAK	1	0	Unmodified	1120.5764	0.57643921	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	0	0	2	0		1				17.461	17.461	2	0.0025828	10868	DP1134_2	149.65	72.596		+	NaN	NaN	NaN	0	0	Median	0	0	0	771	17	710	1214	2248	2248		1	9606
QFSSADEAALKEPIIK	2	0	Unmodified	1745.92	0.91996535	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	1	3	0			2			18.225	18.225	2;3	1.8306E-15	11628	DP1134_3	141.06	104.53			0.4659	0.4519	NaN	1	0	Median	461930000	319020000	142910000	772	251	711	1215;1216	2249;2250;2251	2249		3	9606
QGDEVSVHYDPMIAK	1	0	Oxidation (M)	1703.7825	0.78248559	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		2				16.896	16.896	2;3	1.5099E-110	10014	DP1134_2	210.79	157.71			0.40184	0.49045	24.761	2	0	Median	238020000	159370000	78649000	773	241	712	1217;1218	2252;2253;2254;2255	2254	250	4	9606
QGDEVSVHYDPMIAK	1	0	Unmodified	1687.7876	0.78757097	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				17.811	17.811	3	0.0012167	11470	DP1134_2	104.9	68.797			0.42575	0.51963	NaN	1	0	Median	90959000	68653000	22306000	774	241	712	1219	2256;2257	2257		2	9606
QGGGGGGGSVPGIER	0	1	Unmodified	1283.6218	0.62182627	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	0	2	0		1				15.656	15.656	2	0.010285	7899	DP1134_2	130.56	73.015			NaN	NaN	NaN	0	0	Median	0	0	0	775	142	713	1220	2258	2258		1	9606
QGPLHGMLINTPYVTK	1	0	Oxidation (M)	1783.9291	0.92909025	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					18.095	18.095	3	0.0005706	10635	DP1134_1	97.2	97.2			0.39641	0.47901	NaN	1	0	Median	326680000	231700000	94976000	776	199	714	1221	2259;2260	2259	199	2	9606
QGPLHGMLINTPYVTK	1	0	Unmodified	1767.9342	0.93417563	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					19.333	19.333	3	0.0016511	12556	DP1134_1	132.15	68.994			NaN	NaN	NaN	0	0	Median	0	0	0	777	199	714	1222	2261	2261		1	9606
QGTIFLAGPPLVK	1	0	Unmodified	1339.7864	0.7863724	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			20.627	20.627	2	6.363E-06	15441	DP1134_3	129.7	111.44			0.41401	0.50549	NaN	1	0	Median	282500000	200320000	82180000	778	251	715	1223	2262;2263;2264;2265;2266;2267;2268	2264		7	9606
QHCCPAGYTCNVK	1	0	Unmodified	1593.6487	0.64865142	109	P28799	GRN	Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7	yes	yes	0	0	0	5	0					1	14.292	14.292	3	0.0003572	5113	DP1134_5	92.781	81.013			6.1322	7.1551	NaN	1	0	Median	6860600	1158800	5701700	779	109	716	1224	2269	2269		1	9606
QISNLQQSISDAEQR	0	1	Unmodified	1715.8438	0.84384029	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	3	0			1			18.527	18.527	2	0.0066364	12250	DP1134_3	107.03	54.636		+	NaN	NaN	NaN	0	0	Median	107110000	107110000	0	780	51	717	1225	2270	2270		1	9606
QISNLQQSISDAEQRGENALKDAK	2	1	Unmodified	2642.326	0.32598518	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	2	2.5	0.5		1	1			20.384	20.384	4	0.023398	15553	DP1134_2	83.251	45.076		+	NaN	NaN	NaN	0	0	Median	37662000	37662000	0	781	51	718	1226;1227	2271;2272	2271		2	9606
QKADEAYLIGR	1	1	Unmodified	1262.6619	0.66190017	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1	0	1					16.615	16.615	2	8.4701E-05	8258	DP1134_1	134.05	73.574			NaN	NaN	NaN	0	0	Median	124720000	124720000	0	782	78	719	1228	2273	2273		1	9606
QLFHPEQLITGK	1	0	Unmodified	1409.7667	0.76669959	178;246	P68363;P68366;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q6PEY2	TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA8;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain	no	no	0	0	0	3	0			1			19.228	19.228	3	0.020634	13115	DP1134_3	66.538	0			NaN	NaN	NaN	0	0	Median	17540000	17540000	0	783	178;246	720	1229	2274	2274		1	9606
QLFHPEQLITGKEDAANNYAR	1	1	Unmodified	2414.1979	0.19787154	178;246	P68363;P68366;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q9NY65	TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA8	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain	no	no	0	0	1	3	0			1			18.828	18.828	3	7.416499999999999E-53	12661	DP1134_3	167.9	167.9			0.45445	0.52603	NaN	1	0	Median	113840000	80173000	33667000	784	178;246	721	1230	2275;2276;2277	2276		3	9606
QLTEEDGVHSVIEENIK	1	0	Unmodified	1938.9535	0.95345032	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					18.488	18.488	2;3	0.0022251	11356	DP1134_1	68.481	48.808			0.65281	0.78885	7.4876	2	0	Median	437740000	262830000	174910000	785	199	722	1231;1232	2278;2279;2280	2278		3	9606
QNLEPLFEQYINNLR	0	1	Unmodified	1889.9636	0.9635615	9;50;16	CON__P13647;P13647;CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT5;KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	0	2	0.816	1	1	1			23.544	23.544	2	2.5673E-176	19670	DP1134_3	235.49	143.95		+	NaN	NaN	NaN	0	0	Median	13391000	13391000	0	786	16;9;50	723	1233;1234;1235	2281;2282;2283;2284;2285;2286;2287	2286		7	9606
QNLEPLFEQYINNLRR	0	2	Unmodified	2046.0647	0.064672527	9;50;16	CON__P13647;P13647;CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT5;KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	1	2.33	0.943	1		2			22.434	22.434	2;3	2.386E-26	18069	DP1134_3	170.89	113.85		+	NaN	NaN	NaN	0	0	Median	45955000	45955000	0	787	16;9;50	724	1236;1237;1238	2288;2289;2290;2291;2292	2292		5	9606
QPILIYIPPYAELR	0	1	Unmodified	1684.9552	0.95522864	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	1					22.87	22.87	2	0.0078245	17857	DP1134_1	103.34	72.452			NaN	NaN	NaN	0	0	Median	3383300	3383300	0	788	28	725	1239	2293	2293		1	9606
QPTIFQNK	1	0	Unmodified	974.51853	0.5185304	161	P62280	RPS11	40S ribosomal protein S11	yes	yes	0	0	0	4	0				1		16.481	16.481	2	0.032813	8930	DP1134_4	111.65	37.674			NaN	NaN	NaN	0	0	Median	22806000	22806000	0	789	161	726	1240	2294	2294		1	9606
QQKVMVQHMK	2	0	2 Oxidation (M)	1287.6428	0.64276141	262	Q9UPR0	PLCL2	Inactive phospholipase C-like protein 2	yes	yes	0	2	1	5	0					1	16.22	16.22	3	0.026331	7922	DP1134_5	66.299	18.587			NaN	NaN	NaN	0	0	Median	0	0	0	790	262	727	1241	2295	2295	282;283	1	9606
QQMLEQHLQDVR	0	1	Oxidation (M)	1539.7464	0.74637486	125	P40763	STAT3	Signal transducer and activator of transcription 3	yes	yes	0	1	0	1	0	1					20.091	20.091	3	0.026124	13846	DP1134_1	61.435	26.429			NaN	NaN	NaN	0	0	Median	13054000	0	13054000	791	125	728	1242	2296	2296	126	1	9606
QREELGQGLQGVEQK	1	1	Unmodified	1697.8697	0.86966111	193	Q07065	CKAP4	Cytoskeleton-associated protein 4	yes	yes	0	0	1	2	0		1				16.376	16.376	3	2.1004E-09	9063	DP1134_2	125.67	99.715			NaN	NaN	NaN	0	0	Median	19528000	12174000	7353800	792	193	729	1243	2297	2297		0	9606
QRPSEIKDYSPYFK	2	1	Unmodified	1756.8784	0.87843489	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	2	3	0			1			17.325	17.325	4	0.0034965	10262	DP1134_3	80.318	63.117		+	NaN	NaN	NaN	0	0	Median	12453000	12453000	0	793	14	730	1244	2298	2298		1	9606
QSLEASLAETEGR	0	1	Unmodified	1389.6736	0.67358707	15	CON__P13645;P13645;CON__P02535-1	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	2	0.816	1	1	1			18.368	18.368	2	1.5587E-103	11929	DP1134_3	208.84	162.38		+	NaN	NaN	NaN	0	0	Median	152390000	152390000	0	794	15	731	1245;1246;1247	2299;2300;2301;2302	2301		4	9606
QSSYSQQPYNNQGQQQNMESSGSQGGR	0	1	Oxidation (M)	2990.2445	0.24451675	235	Q92804	TAF15	TATA-binding protein-associated factor 2N	yes	yes	0	1	0	2	0		1				14.943	14.943	3	0.0001521	6953	DP1134_2	94.837	77.761			NaN	NaN	NaN	0	0	Median	7021700	0	7021700	795	235	732	1248	2303;2304	2303	236	2	9606
QSVEADINGLRR	0	2	Unmodified	1356.711	0.71097563	15	CON__P13645;P13645;CON__P02535-1	KRT10	Keratin, type I cytoskeletal 10	no	no	0	0	1	2.75	1.09	1		2	1		17.244	17.244	2;3	2.2796E-166	9983	DP1134_3	238.01	131.13		+	NaN	NaN	NaN	0	0	Median	469050000	469050000	0	796	15	733	1249;1250;1251;1252	2305;2306;2307;2308	2306		4	9606
QTALVELLK	1	0	Unmodified	1013.6121	0.61209643	13	CON__P02769			yes	yes	0	0	0	3	0			1			20.107	20.107	2	0.026482	14506	DP1134_3	101.25	29.538		+	NaN	NaN	NaN	0	0	Median	0	0	0	797	13	734	1253	2309	2309		1	
QTFSPFGQIMEIR	0	1	Unmodified	1552.7708	0.77079869	187	Q01085;P31483	TIAL1;TIA1	Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40	yes	no	0	0	0	3	0			1			22.275	22.275	2	2.71E-56	17837	DP1134_3	185.99	114.82			NaN	NaN	NaN	0	0	Median	6029400	0	6029400	798	187	735	1254	2310	2310		1	9606
QTYSTEPNNLK	1	0	Unmodified	1293.6201	0.62009493	131	P46779	RPL28	60S ribosomal protein L28	yes	yes	0	0	0	4.5	0.5				1	1	15.151	15.151	2	4.9867E-39	6299	DP1134_5	177.7	124.61			0.34733	0.40526	NaN	1	0	Median	14526000	12295000	2231600	799	131	736	1255;1256	2311;2312;2313;2314	2312		4	9606
QVGYENAGTVEFLVDR	0	1	Unmodified	1795.8741	0.87407779	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	2					20.772	20.772	2	6.5162E-230	14602	DP1134_1	256.95	203.38			0.60953	0.7529	NaN	1	0	Median	657900000	408140000	249760000	800	78	737	1257;1258	2315;2316;2317;2318;2319	2315		5	9606
QVLIASHLPSYELR	0	1	Unmodified	1624.8937	0.89369102	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					19.243	19.243	2;3	5.3116E-21	12510	DP1134_1	155.33	132.32			0.5894	0.72803	NaN	1	0	Median	78880000	50531000	28348000	801	199	738	1259;1260	2320;2321;2322	2320		3	9606
QVQAEVPGSPIFVMR	0	1	Oxidation (M)	1672.8607	0.86067633	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					19.39	19.39	2	1.1157E-11	12668	DP1134_1	139.32	139.32			0.38345	0.47365	NaN	1	0	Median	180400000	129170000	51232000	802	199	739	1261	2323;2324;2325	2323	200	3	9606
QVQAEVPGSPIFVMR	0	1	Unmodified	1656.8658	0.86576171	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					20.573	20.573	2	0.0097981	14566	DP1134_1	62.408	27.52			0.43881	0.54202	NaN	1	0	Median	191270000	136360000	54908000	803	199	739	1262	2326	2326		1	9606
QVVNIPSFIVR	0	1	Unmodified	1270.7398	0.73975656	132	P46781	RPS9	40S ribosomal protein S9	yes	yes	0	0	0	4	0				1		21.104	21.104	2	2.7170000000000004E-29	16206	DP1134_4	173.39	116.58			NaN	NaN	NaN	0	0	Median	12280000	12280000	0	804	132	740	1263	2327	2327		1	9606
QYNSFNFALLEDVQAK	1	0	Unmodified	1885.921	0.92102798	135	P48594	SERPINB4	Serpin B4	yes	yes	0	0	0	4	0				1		22.311	22.311	2	2.1876E-48	17989	DP1134_4	177.83	131.92			NaN	NaN	NaN	0	0	Median	4057700	4057700	0	805	135	741	1264	2328;2329	2328		2	9606
RATLLSARQGMMSAR	0	3	2 Oxidation (M)	1679.8559	0.85594208	40	O95071	UBR5	E3 ubiquitin-protein ligase UBR5	yes	yes	0	2	2	2	0		1				21.452	21.452	2	0.030473	17006	DP1134_2	69.979	11.807			NaN	NaN	NaN	0	0	Median	3314600	3314600	0	806	40	742	1265	2330	2330	45;46	1	9606
RAYIAYELNSVQHR	0	2	Unmodified	1718.8853	0.8852516	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					17.402	17.402	3	5.5028E-08	9598	DP1134_1	124.42	93.511			0.63729	0.62796	NaN	1	0	Median	204430000	120830000	83605000	807	199	743	1266	2331;2332	2332		2	9606
RDYLHYIR	0	2	Unmodified	1134.5934	0.59342667	161	P62280	RPS11	40S ribosomal protein S11	yes	yes	0	0	1	4	0				1		16.91	16.91	3	0.0078854	9616	DP1134_4	62.582	37.286			0.57317	0.62424	NaN	1	0	Median	23440000	14182000	9258100	808	161	744	1267	2333;2334	2333		2	9606
RFDFMGTCVYVLAQTCGTRPGLHR	0	3	Oxidation (M)	2857.3574	0.3574422	269	Q9Y6R7	FCGBP	IgGFc-binding protein	yes	no	0	1	2	5	0					1	18.82	18.82	4	0.023716	12333	DP1134_5	43.216	17.808			NaN	NaN	NaN	0	0	Median	8165900	0	8165900	809	269	745	1268	2335	2335	289	1	9606
RFQAQSLGTTYIYDIPEMFR	0	2	Oxidation (M)	2451.1893	0.18928069	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					21.463	21.463	3	0.00039399	15837	DP1134_1	80.362	55.469			0.46974	0.46286	NaN	1	0	Median	25282000	15985000	9297600	810	199	746	1269	2336;2337	2337	186	2	9606
RFVTPSEPVAHSR	0	2	Unmodified	1481.7739	0.77391024	30	O14654	IRS4	Insulin receptor substrate 4	yes	yes	0	0	1	1	0	1					15.071	15.071	3	0.031837	5682	DP1134_1	57.034	28.829			NaN	NaN	NaN	0	0	Median	0	0	0	811	30	747	1270	2338	2338		1	9606
RGEEGHDPKEPEQLR	1	2	Unmodified	1775.8551	0.85507368	141	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	yes	yes	0	0	2	3	0			1			12.985	12.985	4	0.0030577	3973	DP1134_3	73.834	54.548			3.3059	3.6318	NaN	1	0	Median	8383300	1681600	6701700	812	141	748	1271	2339;2340	2340		2	9606
RHPDYSVVLLLR	0	2	Unmodified	1466.8358	0.83578221	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	1	2	0		1				19.826	19.826	3	0.011844	14599	DP1134_2	89.43	51.193		+	NaN	NaN	NaN	0	0	Median	0	0	0	813	12	749	1272	2341	2341		1	9606
RHPEYAVSVLLR	0	2	Unmodified	1438.8045	0.80448208	13	CON__P02769			yes	yes	0	0	1	2.29	1.03	2	2	2	1		18.334	18.334	2;3	2.1054E-56	12511	DP1134_2	187.62	153.66		+	NaN	NaN	NaN	0	0	Median	787920000	787920000	0	814	13	750	1273;1274;1275;1276;1277;1278;1279	2342;2343;2344;2345;2346;2347;2348;2349;2350;2351;2352;2353	2346		12	
RHPYFYAPELLFFAK	1	1	Unmodified	1897.9879	0.98792576	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	1	2	0		1				22.534	22.534	3	0.019892	18712	DP1134_2	93.106	59.44		+	NaN	NaN	NaN	0	0	Median	3230300	3230300	0	815	12	751	1280	2354;2355	2355		2	9606
RHPYFYAPELLYYANK	1	1	Unmodified	2044.0207	0.020682448	13	CON__P02769			yes	yes	0	0	1	2	0.632	1	3	1			20.74	20.74	2;3;4	3.7101E-12	15952	DP1134_2	140.96	109.54		+	NaN	NaN	NaN	0	0	Median	170570000	170570000	0	816	13	752	1281;1282;1283;1284;1285	2356;2357;2358;2359;2360;2361;2362	2358		7	
RIGYPVMIK	1	1	Oxidation (M)	1091.6161	0.61613595	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	1	2	0		1				16.765	16.765	2	0.0022038	9732	DP1134_2	110.12	77.279			0.4431	0.45262	NaN	1	0	Median	185840000	127160000	58678000	817	241	753	1286	2363;2364;2365;2366;2367;2368	2364	245	6	9606
RILNVPQELYEK	1	1	Unmodified	1500.83	0.83002813	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					18.689	18.689	2	0.025856	11757	DP1134_1	44.309	0.79715			NaN	NaN	NaN	0	0	Median	45819000	31142000	14678000	818	199	754	1287	2369	2369		0	9606
RIPIHNEDITYDELVLMMQR	0	2	2 Oxidation (M)	2517.2356	0.23557896	233	Q92734	TFG	Protein TFG	yes	yes	0	2	1	3	0			1			19.264	19.264	3	0.0020929	13210	DP1134_3	107.91	68.001			NaN	NaN	NaN	0	0	Median	10347000	0	10347000	819	233	755	1288	2370	2370	233;234	1	9606
RIPIHNEDITYDELVLMMQR	0	2	Oxidation (M)	2501.2407	0.24066434	233	Q92734	TFG	Protein TFG	yes	yes	0	1	1	3	0			1			20.127	20.127	3	0.0024272	14575	DP1134_3	104.81	80.784			NaN	NaN	NaN	0	0	Median	8821100	0	8821100	820	233	755	1289	2371;2372	2371	233;234	2	9606
RIPVQAVWAGWGHASENPK	1	1	Unmodified	2102.081	0.080991294	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	1	1	0	2					19.261	19.261	3	7.7585E-48	12535	DP1134_1	186.98	129.81			NaN	NaN	NaN	0	0	Median	0	0	0	821	28;199	756	1290;1291	2373;2374	2374		2	9606
RIPVQAVWAGWGHASENPKLPELLLK	2	1	Unmodified	2908.6076	0.60756718	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	2	1	0	1					21.558	21.558	4	1.0066E-122	15851	DP1134_1	200.04	161.68			0.18978	0.21043	NaN	1	0	Median	45334000	34569000	10765000	822	199	757	1292	2375;2376;2377;2378;2379	2376		5	9606
RLLLEDLVK	1	1	Unmodified	1097.6808	0.6808447	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					20.178	20.178	2	0.010004	13769	DP1134_1	99.139	75.37			0.59509	0.71795	NaN	1	0	Median	285740000	175450000	110290000	823	199	758	1293	2380	2380		1	9606
RLLLMELQMWSGQDSAR	0	2	Oxidation (M)	2049.0136	0.013564934	272				yes	yes	0	1	1	5	0					1	20.938	20.938	3	0.035953	15456	DP1134_5	55.975	21.593	+		NaN	NaN	NaN	0	0	Median	32070000	32070000	0	824	272	759	1294	2381	2381	291	1	9606
RLNISYTR	0	2	Unmodified	1021.5669	0.56687757	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	1	3	0.816		1	1	1		15.841	15.841	2	2.6244E-11	8322	DP1134_2	151.44	92.524			0.49568	0.48846	18.661	3	0	Plateau	810760000	533230000	277540000	825	241	760	1295;1296;1297	2382;2383;2384;2385	2382		4	9606
RLTFLVAQK	1	1	Unmodified	1074.655	0.6549643	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					17.902	17.902	2	0.0066172	10376	DP1134_1	127.46	50.179			0.64966	0.78379	NaN	1	0	Median	609710000	349180000	260530000	826	199	761	1298	2386	2386		1	9606
RPAEDMEEEQAFKR	1	2	Oxidation (M)	1750.7944	0.79444726	153	P61978	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	yes	yes	0	1	2	3	0			1			14.62	14.62	3	0.00069606	5830	DP1134_3	103.3	66.768			1.3678	1.4682	NaN	1	0	Median	12358000	5081300	7277100	827	153	762	1299	2387	2387	154	1	9606
RPCFSALTPDETYVPK	1	1	Unmodified	1879.9138	0.91383411	13	CON__P02769			yes	yes	0	0	1	2.4	1.02	1	2	1	1		18.783	18.783	2;3	4.0275999999999997E-202	13082	DP1134_2	242.93	181.39		+	NaN	NaN	NaN	0	0	Median	491990000	491990000	0	828	13	763	1300;1301;1302;1303;1304	2388;2389;2390;2391;2392;2393;2394	2389		7	
RPGAALDPGCVLAK	1	1	Unmodified	1423.7606	0.76056836	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					17.318	17.318	2;3	0.00087988	9407	DP1134_1	76.165	40.653			0.36174	0.43642	0.38763	2	0	Median	828030000	599200000	228830000	829	199	764	1305;1306	2395;2396;2397;2398;2399;2400	2398		6	9606
RPGAVLEAGCVVAR	0	2	Unmodified	1453.7824	0.78236643	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	1	1	0	1					16.917	16.917	3	0.016522	8740	DP1134_1	50.659	36.479			0.55623	0.54809	NaN	1	0	Median	23448000	14615000	8833300	830	28	765	1307	2401	2401		1	9606
RPLEMEQQQAYRPEMK	1	2	2 Oxidation (M)	2064.9721	0.97209405	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	2	2	2	0		1				14.618	14.618	3	0.0013174	6453	DP1134_2	105.63	64.615			NaN	NaN	NaN	0	0	Median	16751000	0	16751000	831	248	766	1308	2402	2402	259;260	1	9606
RPLEMEQQQAYRPEMK	1	2	Oxidation (M)	2048.9772	0.97717943	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	1	2	2	0		1				15.506	15.506	3	1.8917E-08	7554	DP1134_2	138.19	99.297			NaN	NaN	NaN	0	0	Median	18499000	0	18499000	832	248	766	1309	2403;2404;2405	2403	259;260	3	9606
RSAQDPTMLQFK	1	1	Unmodified	1420.7133	0.71328381	259	Q9P2M7	CGN	Cingulin	yes	yes	0	0	1	1	0	1					18.194	18.194	2	0.0016123	10671	DP1134_1	117.01	52.173			NaN	NaN	NaN	0	0	Median	15427000	15427000	0	833	259	767	1310	2406	2406		1	9606
RSIQGVGHMMSTMVLSRK	1	2	3 Oxidation (M)	2065.0231	0.023083763	205	Q14573	ITPR3	Inositol 1,4,5-trisphosphate receptor type 3	yes	yes	0	3	2	5	0					1	23.952	23.952	2	0.034875	19857	DP1134_5	46.88	29.186			NaN	NaN	NaN	0	0	Median	0	0	0	834	205	768	1311	2407	2407	210;211;212	1	9606
RSVSFGGFGWIDK	1	1	Unmodified	1454.7306	0.73064844	218	Q684P5	RAP1GAP2	Rap1 GTPase-activating protein 2	yes	yes	0	0	1	1	0	1					20.97	20.97	2	0.011764	15154	DP1134_1	102.95	55.727			NaN	NaN	NaN	0	0	Median	25485000	25485000	0	835	218	769	1312	2408	2408		1	9606
RTDEEGKDVPDHAVLEMK	2	1	Oxidation (M)	2083.9844	0.98443288	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	1	2	2	0		1				14.932	14.932	4	0.002006	6947	DP1134_2	58.672	48.936			5.7184	6.2355	NaN	1	0	Median	15830000	1738000	14092000	836	248	770	1313	2409	2409	261	1	9606
RVDPVYIHLAER	0	2	Unmodified	1466.7994	0.7993967	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	2.67	1.25	1		1	1		17.434	17.434	3	1.5352E-07	9633	DP1134_1	133.04	107.03			0.45838	0.45167	11.458	3	0	Plateau	1719899999.9999998	1147900000	571990000	837	199	771	1314;1315;1316	2410;2411;2412;2413;2414;2415;2416;2417;2418;2419	2411		10	9606
RVLDELTLTK	1	1	Unmodified	1186.6921	0.69213767	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	1	3	0			1			18.025	18.025	2	0.00014982	11267	DP1134_3	132.01	45.538		+	NaN	NaN	NaN	0	0	Median	52381000	52381000	0	838	15	772	1317	2420	2420		1	9606
RVSALNSVHCEHVEDEGESR	0	2	Unmodified	2309.0455	0.045470003	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					15.187	15.187	4	4.7141E-06	5871	DP1134_1	108.47	98.715			0.65132	0.64178	NaN	1	0	Median	58660000	33637000	25023000	839	199	773	1318	2421;2422;2423;2424	2422		4	9606
RYDDPEVQKDIK	2	1	Unmodified	1504.7522	0.75217174	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	2	2	0		1				14.906	14.906	3	0.001411	6862	DP1134_2	93.348	64.987			1.3865	1.5119	NaN	1	0	Median	11891000	5380000	6511000	840	122	774	1319	2425	2425		1	9606
SAEFLLHMLK	1	0	Unmodified	1187.6373	0.63726532	92	P18621	RPL17	60S ribosomal protein L17	yes	yes	0	0	0	4	0				1		20.603	20.603	2	0.0071159	15519	DP1134_4	121.05	69.982			NaN	NaN	NaN	0	0	Median	5057800	5057800	0	841	92	775	1320	2426	2426		1	9606
SAHLQWMVVR	0	1	Acetyl (Protein N-term);Oxidation (M)	1283.6445	0.64447597	131	P46779	RPL28	60S ribosomal protein L28	yes	yes	1	1	0	5	0					1	19.271	19.271	2	0.034775	12874	DP1134_5	54.722	28.677			NaN	NaN	NaN	0	0	Median	0	0	0	842	131	776	1321	2427	2427	128	1	9606
SCQQNQQQCQPPPK	1	0	Acetyl (Protein N-term)	1768.7621	0.76210127	29	Q5TA76;Q9BYE3;Q5TA78;Q5TA79;Q5TA82;Q5TA81;O14633;Q5T7P3	LCE3A;LCE3D;LCE4A;LCE2A;LCE2D;LCE2C;LCE2B;LCE1B	Late cornified envelope protein 3A;Late cornified envelope protein 3D;Late cornified envelope protein 4A;Late cornified envelope protein 2A;Late cornified envelope protein 2D;Late cornified envelope protein 2C;Late cornified envelope protein 2B;Late cornified envelope protein 1B	yes	no	1	0	0	4.5	0.5				1	1	14.007	14.007	2	2.776E-77	4674	DP1134_5	195.83	156.04			NaN	NaN	NaN	0	0	Median	2578800	2578800	0	843	29	777	1322;1323	2428;2429;2430;2431;2432;2433;2434	2430		7	9606
SCQQSQQQCQPPPK	1	0	Acetyl (Protein N-term)	1741.7512	0.75120224	217	Q5TCM9;Q5T7P2;Q5T752;Q5T754;Q5T753;Q5T751	LCE5A;LCE1A;LCE1D;LCE1F;LCE1E;LCE1C	Late cornified envelope protein 5A;Late cornified envelope protein 1A;Late cornified envelope protein 1D;Late cornified envelope protein 1F;Late cornified envelope protein 1E;Late cornified envelope protein 1C	yes	no	1	0	0	4	0				1		14.05	14.05	2	1.1785E-19	5133	DP1134_4	150.04	127.32			NaN	NaN	NaN	0	0	Median	1872700	1872700	0	844	217	778	1324	2435;2436;2437	2436		3	9606
SDAEPSVFLFKPSDEQLK	2	0	Unmodified	2036.0102	0.01023692	20	CON__Q05B55			yes	yes	0	0	1	4	0				1		20.124	20.124	3	1.2512E-18	14756	DP1134_4	149.6	114.5		+	NaN	NaN	NaN	0	0	Median	53060000	53060000	0	845	20	779	1325	2438	2438		1	
SDLEMQYETLQEELMALKK	2	0	2 Oxidation (M)	2330.1022	0.10216475	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	2	1	2	0.816	1	1	1			22.108	22.108	3	8.3649E-28	17516	DP1134_3	157.83	130.27		+	NaN	NaN	NaN	0	0	Median	21927000	21927000	0	846	17	780	1326;1327;1328	2439;2440;2441;2442	2442	24;25	4	9606
SDMNTVLNYIFSHAQVTK	1	0	Oxidation (M)	2083.0044	0.004440036	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					22.088	22.088	3	0.00044996	16741	DP1134_1	101.78	79.469			0.75592	0.91344	NaN	1	0	Median	143010000	83246000	59764000	847	199	781	1329	2443;2444	2444	201	2	9606
SDMNTVLNYIFSHAQVTK	1	0	Unmodified	2067.0095	0.0095254139	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					23.483	23.483	3	0.0011967	18736	DP1134_1	91.932	59.627			0.70276	0.84921	NaN	1	0	Median	11886000	7462300	4423800	848	199	781	1330	2445;2446;2447;2448;2449	2447		5	9606
SEITELR	0	1	Unmodified	846.4447	0.44469675	15	CON__P13645;P13645;CON__P02535-1	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	4	0				1		16.281	16.281	2	0.017846	8357	DP1134_4	132.96	43.057		+	NaN	NaN	NaN	0	0	Median	9766900	9766900	0	849	15	782	1331	2450	2450		1	9606
SEQEFQEQLESAR	0	1	Unmodified	1579.7114	0.71142914	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2.5	0.5		1	1			18.168	18.168	2	4.2021E-43	12230	DP1134_2	177.57	144.84			0.67256	0.80392	12.385	2	0	Median	1005199999.9999999	626320000	378850000	850	241	783	1332;1333	2451;2452;2453;2454;2455	2452		5	9606
SEQEFQEQLESARR	0	2	Unmodified	1735.8125	0.81254017	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	1	3	0			1			17.225	17.225	3	0.0051875	10027	DP1134_3	72.731	54.367			0.56101	0.59214	NaN	1	0	Median	70798000	44383000	26415000	851	241	784	1334	2456	2456		0	9606
SEREVFFMNTQSIVQLVQR	0	2	Oxidation (M)	2326.174	0.17396498	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					21.385	21.385	3	0.023033	15615	DP1134_1	72.421	39.496			NaN	NaN	NaN	0	0	Median	0	0	0	852	199	785	1335	2457	2457	185	1	9606
SESPKEPEQLR	1	1	Unmodified	1298.6466	0.64664404	71	P09651	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	yes	yes	0	0	1	3.5	0.5			1	1		14.264	14.264	3	1.3294E-05	5328	DP1134_3	138.63	138.63			1.6298	1.8176	45.731	2	0	Median	19223000	5761900	13461000	853	71	786	1336;1337	2458;2459;2460	2458		3	9606
SETAPAAPAAAPPAEK	1	0	Acetyl (Protein N-term)	1519.7518	0.75183739	86	P16403	HIST1H1C	Histone H1.2	yes	yes	1	0	0	4	0				1		16.581	16.581	2	0.0096775	8893	DP1134_4	98.902	6.1206			NaN	NaN	NaN	0	0	Median	14311000	14311000	0	854	86	787	1338	2461	2461		1	9606
SFGLPSIGR	0	1	Unmodified	932.50797	0.50796571	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				19.755	19.755	2	0.013124	14455	DP1134_2	111.74	36.001			0.48801	0.5704	NaN	1	0	Median	28448000	19196000	9252400	855	56	788	1339	2462;2463	2462		2	9606
SFLLDLLNATGK	1	0	Unmodified	1290.7184	0.71835242	27	O00571	DDX3X	ATP-dependent RNA helicase DDX3X	yes	yes	0	0	0	2	0		1				24.138	24.138	2	5.005E-23	21021	DP1134_2	159.83	129.26			2.6775	3.2679	NaN	1	0	Median	14036000	3617100	10419000	856	27	789	1340	2464;2465;2466;2467	2464		4	9606
SFNDDAMLIEK	1	0	Oxidation (M)	1297.586	0.58601761	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		1				18.21	18.21	2	0.00018805	12260	DP1134_2	134.68	78.87			0.53785	0.65646	NaN	1	0	Median	209150000	130470000	78676000	857	241	790	1341	2468;2469	2469	247	2	9606
SFNDDAMLIEK	1	0	Unmodified	1281.5911	0.59110299	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				19.211	19.211	2	0.0065803	13656	DP1134_2	99.815	64.274			0.62067	0.75754	NaN	1	0	Median	37145000	22600000	14545000	858	241	790	1342	2470;2471;2472	2470		3	9606
SGDAAIVDMVPGKPMCVESFSDYPPLGR	1	1	2 Oxidation (M)	3026.3824	0.38237913	177	P68104;Q5VTE0	EEF1A1;EEF1A1P5	Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3	yes	no	0	2	1	3	0			1			20.027	20.027	3	0.019446	14426	DP1134_3	45.901	26.41			NaN	NaN	NaN	0	0	Median	6591700	6591700	0	859	177	791	1343	2473	2473	162;163	1	9606
SGFSSVSVSR	0	1	Unmodified	1011.4985	0.49852324	9	CON__P02538;P02538	KRT6A	Keratin, type II cytoskeletal 6A	yes	no	0	0	0	5	0					1	16.296	16.296	2	0.022893	8051	DP1134_5	100.02	32.982		+	NaN	NaN	NaN	0	0	Median	0	0	0	860	9	792	1344	2474	2474		1	9606
SGGASHSELIHNLRK	1	1	Unmodified	1604.8383	0.83830141	96	P22061	PCMT1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	yes	yes	0	0	1	4	0				1		14.631	14.631	4	0.012606	6049	DP1134_4	72.681	42.197			NaN	NaN	NaN	0	0	Median	7419300	7419300	0	861	96	793	1345	2475	2475		1	9606
SGGGFSSGSAGIINYQR	0	1	Unmodified	1656.7856	0.78559713	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2	0		1				18.411	18.411	2	5.4856E-12	12582	DP1134_2	163.45	131.72		+	NaN	NaN	NaN	0	0	Median	93567000	93567000	0	862	51	794	1346	2476	2476		1	9606
SGGGGGGGGCGGGGGVSSLR	0	1	Unmodified	1548.6699	0.66991545	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			14.805	14.805	2	2.9552E-19	6185	DP1134_3	152.11	134.89		+	NaN	NaN	NaN	0	0	Median	222850000	222850000	0	863	15	795	1347	2477;2478	2477		2	9606
SGPFGQIFRPDNFVFGQSGAGNNWAK	1	1	Unmodified	2797.3361	0.33609636	66;179	P07437;P68371;P04350	TUBB;TUBB4B;TUBB4A	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain	no	no	0	0	1	3	0			1			22.413	22.413	3	3.1932E-38	17951	DP1134_3	153.57	139.63			0.4006	0.46369	NaN	1	0	Median	18045000	12504000	5541200	864	66;179	796	1348	2479;2480;2481;2482;2483;2484	2481		6	9606
SGTASVVCLLNNFYPR	0	1	Unmodified	1796.888	0.88795372	44	P01834	IGKC	Ig kappa chain C region	yes	yes	0	0	0	4.33	0.471				2	1	23.017	23.017	2;3	1.8684000000000002E-62	18624	DP1134_4	190.26	134.45			NaN	NaN	NaN	0	0	Median	50040000	50040000	0	865	44	797	1349;1350;1351	2485;2486;2487;2488;2489;2490;2491	2486		7	9606
SGVSDHWALDDHHALHLTR	0	1	Unmodified	2166.0355	0.035497664	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			3			17.622	17.622	3;4;5	3.7354E-36	10622	DP1134_3	161.2	138.66			0.57262	0.69999	3.5792	2	0	Median	702050000	441440000	260610000	866	251	798	1352;1353;1354	2492;2493;2494;2495;2496;2497;2498;2499	2494		8	9606
SHCIAEVEKDAIPENLPPLTADFAEDKDVCK	3	0	Unmodified	3510.6647	0.66468523	13	CON__P02769			yes	yes	0	0	2	2	0.816	1	1	1			20.004	20.004	4;5	0.00015164	13680	DP1134_1	89.659	69.615		+	NaN	NaN	NaN	0	0	Median	122220000	122220000	0	867	13	799	1355;1356;1357	2500;2501;2502;2503;2504	2500		5	
SHTILLVQPTK	1	0	Acetyl (Protein N-term)	1277.7343	0.73433683	183	P84090	ERH	Enhancer of rudimentary homolog	yes	yes	1	0	0	5	0					1	18.543	18.543	2	0	11784	DP1134_5	337.59	305.83			0.60838	0.70986	NaN	1	0	Median	205570000	125790000	79780000	868	183	800	1358	2505;2506;2507;2508;2509;2510;2511;2512;2513	2509		9	9606
SHTILLVQPTKRPEGR	1	2	Acetyl (Protein N-term)	1873.0534	0.05337956	183	P84090	ERH	Enhancer of rudimentary homolog	yes	yes	1	0	2	5	0					1	16.667	16.667	3	2.7229999999999997E-28	8689	DP1134_5	165.51	127.39			NaN	NaN	NaN	0	0	Median	67155000	67155000	0	869	183	801	1359	2514;2515;2516	2515		3	9606
SIFQHIQSAQSQR	0	1	Unmodified	1528.7746	0.77463852	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	0	1	0	2					17.219	17.219	2;3	1.9727E-145	9213	DP1134_1	230.81	187.39			0.56373	0.69632	52.499	2	0	Median	368860000	199560000	169300000	870	266	802	1360;1361	2517;2518	2518		2	9606
SIIGMIDMFHK	1	0	2 Oxidation (M)	1322.6363	0.63627905	111	P31151;Q86SG5	S100A7;S100A7A	Protein S100-A7;Protein S100-A7A	yes	no	0	2	0	5	0					1	19.188	19.188	2	0.014946	12777	DP1134_5	100.25	53.856			NaN	NaN	NaN	0	0	Median	16803000	16803000	0	871	111	803	1362	2519;2520	2520	110;111	2	9606
SIIGMIDMFHK	1	0	Oxidation (M)	1306.6414	0.64136442	111	P31151;Q86SG5	S100A7;S100A7A	Protein S100-A7;Protein S100-A7A	yes	no	0	1	0	5	0					2	20.148	20.148	2;3	0.023394	14161	DP1134_5	108.57	70.277			NaN	NaN	NaN	0	0	Median	15804000	15804000	0	872	111	803	1363;1364	2521;2522;2523	2523	110;111	3	9606
SIIGMIDMFHK	1	0	Unmodified	1290.6464	0.6464498	111	P31151;Q86SG5	S100A7;S100A7A	Protein S100-A7;Protein S100-A7A	yes	no	0	0	0	5	0					2	21.917	21.917	2;3	0.001334	16826	DP1134_5	126.31	85.319			NaN	NaN	NaN	0	0	Median	28566000	28566000	0	873	111	803	1365;1366	2524;2525	2525		2	9606
SIMAAAGVPVVEGYHGEDQSDQCLK	1	0	Oxidation (M)	2676.216	0.21596573	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		1				18.311	18.311	3	1.6354E-49	12294	DP1134_2	160.2	138.98			0.36569	0.44633	NaN	1	0	Median	116060000	74177000	41887000	874	241	804	1367	2526;2527;2528;2529	2527	251	4	9606
SIMAAAGVPVVEGYHGEDQSDQCLK	1	0	Unmodified	2660.2211	0.22105111	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				19.211	19.211	3	4.9733E-06	13714	DP1134_2	82.177	73.305			0.32595	0.39782	NaN	1	0	Median	50553000	39140000	11412000	875	241	804	1368	2530	2530		1	9606
SIMAAAGVPVVEGYHGEDQSDQCLKEHAR	1	1	Oxidation (M)	3169.4557	0.4556955	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	1	2.67	0.943		2		1		17.18	17.18	4;5	3.624E-45	10505	DP1134_2	148.58	139.47			0.54087	0.55249	2.3536	2	0	Median	444470000	293920000	150550000	876	241	805	1369;1370;1371	2531;2532;2533;2534;2535;2536;2537;2538	2532	251	8	9606
SIMELMNVLELR	0	1	Oxidation (M)	1462.7524	0.75237144	263	Q9UQE7	SMC3	Structural maintenance of chromosomes protein 3	yes	yes	0	1	0	1	0	1					18.003	18.003	2	0.026996	10632	DP1134_1	51.528	8.8101			0.43055	0.53182	NaN	1	0	Median	56083000	38771000	17312000	877	263	806	1372	2539	2539	284	0	9606
SIQFVDWCPTGFK	1	0	Unmodified	1583.7442	0.74424959	178	P68363;P68366	TUBA1B;TUBA4A	Tubulin alpha-1B chain;Tubulin alpha-4A chain	yes	no	0	0	0	3	0			2			21.897	21.897	2	1.3766999999999999E-104	17238	DP1134_3	215.83	143.58			0.64131	0.78303	NaN	1	0	Median	47481000	33863000	13617000	878	178	807	1373;1374	2540;2541;2542;2543;2544	2541		5	9606
SISISVAR	0	1	Unmodified	831.48142	0.48141661	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	3	1.41	1	1	1	1	1	16.819	16.819	2	2.8806E-42	8608	DP1134_1	186.67	43.306		+	NaN	NaN	NaN	0	0	Median	1223100000	1223100000	0	879	51	808	1375;1376;1377;1378;1379	2545;2546;2547;2548;2549;2550;2551;2552	2545		8	9606
SITVLVEGENTR	0	1	Unmodified	1316.6936	0.69359423	116	P33993	MCM7	DNA replication licensing factor MCM7	yes	yes	0	0	0	2	0		1				18.185	18.185	2	0.0082643	12054	DP1134_2	138.08	63.907			NaN	NaN	NaN	0	0	Median	0	0	0	880	116	809	1380	2553	2553		1	9606
SIYYITGESK	1	0	Unmodified	1159.5761	0.57610486	68	P08238;Q58FF8	HSP90AB1;HSP90AB2P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2	yes	no	0	0	0	2	0		1				17.911	17.911	2	0.032954	11571	DP1134_2	65.224	33.695			0.40152	0.49007	NaN	1	0	Median	27278000	18924000	8353400	881	68	810	1381	2554	2554		0	9606
SKAEAESLYQSK	2	0	Unmodified	1339.662	0.66195975	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	1	3	0			1			14.711	14.711	2	1.4935E-15	5814	DP1134_3	150.09	73.987		+	NaN	NaN	NaN	0	0	Median	2612100	2612100	0	882	51	811	1382	2555	2555		1	9606
SKGSYSCEVTHEGSTVTK	2	0	Unmodified	1955.8895	0.88946986	22	CON__Q1RMN8			yes	yes	0	0	1	4	0				1		14.434	14.434	3	6.113E-08	5610	DP1134_4	160.76	135.31		+	NaN	NaN	NaN	0	0	Median	260440000	260440000	0	883	22	812	1383	2556	2556		1	
SLDLDSIIAEVK	1	0	Unmodified	1301.7078	0.70784731	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	0	0	3	1.41	1	1	1	1	1	22.722	22.722	2	2.5751E-217	17647	DP1134_1	256.24	164.39		+	NaN	NaN	NaN	0	0	Median	660580000	660580000	0	884	51	813	1384;1385;1386;1387;1388	2557;2558;2559;2560;2561;2562;2563;2564;2565;2566;2567	2557		11	9606
SLEEIYLFSLPIK	1	0	Unmodified	1550.8596	0.85959692	85	P15880	RPS2	40S ribosomal protein S2	yes	yes	0	0	0	4	0				1		23.75	23.75	2	1.5869E-55	20125	DP1134_4	185.08	185.08			0.53894	0.62605	NaN	1	0	Median	8813600	5759900	3053700	885	85	814	1389	2568;2569;2570;2571;2572;2573	2572		6	9606
SLHTLFGDELCK	1	0	Unmodified	1418.6864	0.68640036	13	CON__P02769			yes	yes	0	0	0	1.67	0.471	1	2				19.404	19.404	2;3	2.9166E-34	13981	DP1134_2	174.23	133.01		+	NaN	NaN	NaN	0	0	Median	137200000	137200000	0	886	13	815	1390;1391;1392	2574;2575;2576	2575		3	
SLHTLFGDKLCTVATLR	1	1	Unmodified	1931.0299	0.029866925	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	1	2	0		1				19.994	19.994	3	0.020404	14904	DP1134_2	83.54	69.976		+	NaN	NaN	NaN	0	0	Median	2243500	2243500	0	887	12	816	1393	2577	2577		1	9606
SLLEGEGSSGGGGR	0	1	Unmodified	1261.5899	0.58985744	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	1.41	1	1	1	1	1	15.881	15.881	2	9.929400000000001E-287	7787	DP1134_3	270.63	200.82		+	NaN	NaN	NaN	0	0	Median	894350000	894350000	0	888	15	817	1394;1395;1396;1397;1398	2578;2579;2580;2581;2582;2583;2584;2585;2586;2587;2588;2589;2590	2585		13	9606
SLNNQFASFIDK	1	0	Unmodified	1382.683	0.68302954	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	0	0	3	0			1			20.528	20.528	2	2.5086E-43	15163	DP1134_3	175.33	63.218		+	NaN	NaN	NaN	0	0	Median	79637000	79637000	0	889	51	818	1399	2591	2591		1	9606
SLNNQFASFIDKVR	1	1	Unmodified	1637.8526	0.85255449	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	0	1	2.83	1.07	1	1	2	2		20.79	20.79	2;3	4.5314E-61	15472	DP1134_3	186.46	136.11		+	NaN	NaN	NaN	0	0	Median	452900000	452900000	0	890	51	819	1400;1401;1402;1403;1404;1405	2592;2593;2594;2595;2596;2597;2598	2595		7	9606
SLPDLGLR	0	1	Unmodified	869.49707	0.49706667	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1	0	2					19.19	19.19	1;2	0.00034658	12353	DP1134_1	138.24	72.439			0.43574	0.53824	4.5847	2	0	Median	247180000	173690000	73489000	891	78	820	1406;1407	2599;2600;2601	2600		3	9606
SLPDLGLRQENIR	0	2	Unmodified	1509.8263	0.82633974	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1	0	2					18.488	18.488	2;3	0.00012613	11298	DP1134_1	119.27	75.504			0.46222	0.45545	3.4369	2	0	Median	424720000	291490000	133230000	892	78	821	1408;1409	2602;2603;2604;2605;2606	2605		5	9606
SLVGLGGTK	1	0	Unmodified	830.48617	0.48616764	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	3.75	0.829			2	1	1	16.712	16.712	2	0.00035304	9208	DP1134_4	136.8	59.95		+	NaN	NaN	NaN	0	0	Median	50944000	50944000	0	893	18	822	1410;1411;1412;1413	2607;2608;2609;2610;2611	2610		5	9606
SLVNLGGSK	1	0	Unmodified	873.49198	0.4919813	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2	1	1		1			16.97	16.97	2	0.015822	9517	DP1134_3	115.49	55.136		+	NaN	NaN	NaN	0	0	Median	729800000	729800000	0	894	51	823	1414;1415	2612;2613	2613		2	9606
SLVQANPEVAMDSIIHMTQHISPTQR	0	1	2 Oxidation (M)	2934.4328	0.43277522	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	2	0	1	0	2					18.584	18.584	3;4	6.1689E-22	11449	DP1134_1	134.15	116.15			0.40268	0.49739	7.3599	2	0	Median	377290000	231260000	146020000	895	199	824	1416;1417	2614;2615;2616;2617;2618;2619;2620;2621;2622	2621	202;203	9	9606
SLVQANPEVAMDSIIHMTQHISPTQR	0	1	Oxidation (M)	2918.4379	0.43786059	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1.5	0.866	3		1			20.127	20.127	3;4	9.3604E-17	13417	DP1134_1	130.16	117.93			0.43242	0.53413	38.786	3	0	Median	223000000	158070000	64925000	896	199	824	1418;1419;1420;1421	2623;2624;2625;2626;2627;2628;2629	2624	202;203	7	9606
SLVQANPEVAMDSIIHMTQHISPTQR	0	1	Unmodified	2902.4429	0.44294597	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					22.094	22.094	3;4	3.3333000000000002E-77	16733	DP1134_1	182.19	170.43			0.36487	0.4507	15.645	2	0	Median	83417000	59736000	23681000	897	199	824	1422;1423	2630;2631;2632;2633;2634;2635;2636	2634		7	9606
SLYNLGGSK	1	0	Unmodified	937.4869	0.48689592	16	CON__P13647;P13647	KRT5	Keratin, type II cytoskeletal 5	no	no	0	0	0	3	0			1			17.225	17.225	2	0.015822	9894	DP1134_3	115.49	63.195		+	NaN	NaN	NaN	0	0	Median	35509000	35509000	0	898	16	825	1424	2637;2638	2637		2	9606
SMPIRKDDEVQVVR	1	2	Oxidation (M)	1686.8723	0.87230365	150	Q9UNX3;P61254	RPL26L1;RPL26	60S ribosomal protein L26-like 1;60S ribosomal protein L26	yes	no	0	1	2	4	0				1		14.681	14.681	3	0.00065749	6066	DP1134_4	78.814	55.696			0.56908	0.61179	NaN	1	0	Median	3207600	2082900	1124800	899	150	826	1425	2639	2639	152	1	9606
SPILVATAVAAR	0	1	Unmodified	1167.6976	0.69755739	27	O00571;O15523	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	yes	no	0	0	0	2	0		1				18.711	18.711	2	0.029267	13008	DP1134_2	94.692	43.346			NaN	NaN	NaN	0	0	Median	34110000	0	34110000	900	27	827	1426	2640	2640		1	9606
SPLQSVVVR	0	1	Unmodified	983.57638	0.57637963	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	0	1.5	0.5	1	1				17.405	17.405	2	0.013711	10749	DP1134_2	101.54	55.862			0.45936	0.55195	13.123	2	0	Median	116630000	77668000	38965000	901	266	828	1427;1428	2641;2642	2642		2	9606
SPPSVTLFPPSTEELNGNK	1	0	Unmodified	2013.0055	0.0054858935	22	CON__Q1RMN8			yes	yes	0	0	0	4	0				1		20.23	20.23	2	0	14626	DP1134_4	316.65	238.11		+	NaN	NaN	NaN	0	0	Median	40331000	40331000	0	902	22	829	1429	2643;2644;2645	2643		3	
SPSELFAQHIVTIVHHVK	1	0	Unmodified	2041.1109	0.11089444	266	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	yes	yes	0	0	0	1.33	0.471	2	1				19.696	19.696	3;4	0.00033742	13271	DP1134_1	95.767	95.767			0.75468	0.91194	1.9255	2	0	Median	171280000	103130000	68149000	903	266	830	1430;1431;1432	2646;2647;2648;2649;2650	2647		5	9606
SPYQEFTDHLVK	1	0	Unmodified	1462.7092	0.70924429	85	P15880	RPS2	40S ribosomal protein S2	yes	yes	0	0	0	4	0				1		18.979	18.979	3	2.5931E-07	12998	DP1134_4	132.86	91.62			0.57998	0.67372	NaN	1	0	Median	41173000	25438000	15735000	904	85	831	1433	2651;2652	2651		2	9606
SQYEQLAEQNR	0	1	Unmodified	1364.6321	0.6320566	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	2	1	1		1			16.105	16.105	2	1.0491E-114	8159	DP1134_3	218.55	163.83		+	NaN	NaN	NaN	0	0	Median	229800000	229800000	0	905	15	832	1434;1435	2653;2654	2654		2	9606
SQYEQLAEQNRK	1	1	Unmodified	1492.727	0.72701962	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	1	2.83	1.46	2		2	1	1	15.021	15.021	2;3	2.1159000000000003E-122	5741	DP1134_1	228.98	168.96		+	NaN	NaN	NaN	0	0	Median	2097999999.9999998	2097999999.9999998	0	906	15	833	1436;1437;1438;1439;1440;1441	2655;2656;2657;2658;2659;2660;2661;2662	2656		8	9606
SSFYPDGGDQETAK	1	0	Unmodified	1500.6369	0.63686721	256	Q9NYF8	BCLAF1	Bcl-2-associated transcription factor 1	yes	yes	0	0	0	1	0	1					16.644	16.644	2	0.032588	8213	DP1134_1	89.301	58.688			NaN	NaN	NaN	0	0	Median	0	0	0	907	256	834	1442	2663	2663		1	9606
SSGPTSLFAVTVAPPGAR	0	1	Unmodified	1713.905	0.90498399	186	Q00839	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	yes	yes	0	0	0	1.5	0.5	1	1				20.768	20.768	2	4.4449999999999995E-140	16020	DP1134_2	220.37	185.87			0.44912	0.53964	13.85	2	0	Median	69306000	45472000	23835000	908	186	835	1443;1444	2664;2665;2666;2667;2668;2669;2670	2666		7	9606
SSGPYGGGGQYFAKPR	1	1	Unmodified	1627.7743	0.77430417	71	P09651	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	yes	yes	0	0	1	3	0			1			16.505	16.505	3	3.5658E-21	8842	DP1134_3	150.22	124.24			2.9993	3.4717	NaN	1	0	Median	68452000	15935000	52517000	909	71	836	1445	2671;2672;2673	2671		3	9606
STAGDTHLGGEDFDNR	0	1	Unmodified	1690.7183	0.71830543	76	P54652;P11142	HSPA2;HSPA8	Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein	yes	no	0	0	0	2	0		1				16.106	16.106	3	4.6027E-05	8679	DP1134_2	115.26	102.94			0.90021	1.0522	NaN	1	0	Median	17666000	9108500	8557900	910	76	837	1446	2674;2675;2676	2674		3	9606
STELLIR	0	1	Unmodified	830.48617	0.48616764	180	Q71DI3;Q16695;P84243;P68431;Q5TEC6;Q6NXT2	HIST2H3A;HIST3H3;H3F3A;HIST1H3A;HIST2H3PS2;H3F3C	Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3;Histone H3.3C	yes	no	0	0	0	5	0					3	17.451	17.451	1;2	6.545E-05	9896	DP1134_5	143.97	62.593			0.66569	0.68756	NaN	1	0	Median	208220000	190740000	17483000	911	180	838	1447;1448;1449	2677;2678;2679	2678		3	9606
STESLQANVQR	0	1	Unmodified	1231.6157	0.61567826	105	P26373	RPL13	60S ribosomal protein L13	yes	yes	0	0	0	4	0				1		15.158	15.158	2	1.6090999999999998E-52	6699	DP1134_4	190.73	150.38			0.71808	0.73942	NaN	1	0	Median	96198000	54041000	42156000	912	105	839	1450	2680;2681	2680		2	9606
STGEAFVQFASK	1	0	Unmodified	1270.6194	0.61936665	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	0	0	3.5	0.5			1	1		18.778	18.778	2	2.971E-99	12524	DP1134_3	219.72	158.89			5.5327	6.427	NaN	1	0	Median	82689000	11658000	71031000	913	112	840	1451;1452	2682;2683;2684	2682		3	9606
STGEAFVQFASQEIAEK	1	0	Unmodified	1840.8843	0.88430813	113;145	P31943;P55795	HNRNPH1;HNRNPH2	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2	no	no	0	0	0	3	0			1			21.433	21.433	2	0	16569	DP1134_3	295.29	262.43			3.0197	3.687	NaN	1	0	Median	219800000	52250000	167550000	914	113;145	841	1453	2685;2686	2685		2	9606
STLVGHDTFTK	1	0	Unmodified	1204.6088	0.60880197	25	CON__Streptavidin			yes	yes	0	0	0	4.17	1.21	1		2	2	7	17.85	17.85	2;3	2.9862E-135	6868	DP1134_1	228.2	171.39		+	NaN	NaN	NaN	0	0	Median	60027000000	60027000000	0	915	25	842	1454;1455;1456;1457;1458;1459;1460;1461;1462;1463;1464;1465	2687;2688;2689;2690;2691;2692;2693;2694;2695;2696;2697;2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709;2710;2711;2712	2687		26	
STNGDTFLGGEDFDQALLR	0	1	Unmodified	2054.9545	0.95451296	122	P38646	HSPA9	Stress-70 protein, mitochondrial	yes	yes	0	0	0	2	0		1				22.029	22.029	2	0	17929	DP1134_2	352.53	291.05			1.9234	2.2481	NaN	1	0	Median	15881000	4526700	11355000	916	122	843	1466	2713;2714;2715;2716	2713		4	9606
STSESTAALGCLVK	1	0	Unmodified	1422.7024	0.70244436	46	P01859	IGHG2	Ig gamma-2 chain C region	no	no	0	0	0	3	0			1			18.329	18.329	2	3.5283E-13	11871	DP1134_3	146.11	86.176			NaN	NaN	NaN	0	0	Median	163950000	163950000	0	917	46	844	1467	2717	2717		1	9606
STSSFSCLSR	0	1	Unmodified	1130.5026	0.50262234	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	5	0					1	16.592	16.592	2	0.0036911	8498	DP1134_5	125.82	66.9		+	NaN	NaN	NaN	0	0	Median	31995000	31995000	0	918	18	845	1468	2718	2718		1	9606
STYSLSSILTLPSSEYQSHDAYTCEVSHK	1	0	Unmodified	3289.5085	0.50850216	20	CON__Q05B55			yes	yes	0	0	0	4	0				2		20.744	20.744	3;4	1.5028E-06	15757	DP1134_4	113.68	97.054		+	NaN	NaN	NaN	0	0	Median	58371000	58371000	0	919	20	846	1469;1470	2719;2720;2721	2720		3	
SVHCQAGDTVGEGDLLVELE	0	0	Unmodified	2126.979	0.97901315	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				21.348	21.348	2	6.2701E-138	16927	DP1134_2	220.32	151.79			NaN	NaN	NaN	0	0	Median	0	0	0	920	56	847	1471	2722;2723	2722		2	9606
SVHSSVPLLNSK	1	0	Unmodified	1266.6932	0.6932003	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					16.424	16.424	2;3	3.3505E-104	7952	DP1134_1	215.72	215.72			0.5236	0.6327	NaN	1	0	Median	67267000	27789000	39478000	921	199	848	1472;1473	2724;2725;2726;2727	2726		4	9606
SVHSSVPLLNSKDPIDR	1	1	Unmodified	1862.985	0.98502522	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	3					17.318	17.318	2;3;4	1.2342000000000001E-162	9198	DP1134_1	268.18	226.83			0.37358	0.4507	17.575	3	0	Plateau	924500000	636220000	288280000	922	199	849	1474;1475;1476	2728;2729;2730;2731;2732;2733;2734;2735;2736;2737;2738;2739;2740	2729		13	9606
SVTCTYSPALNK	1	0	Unmodified	1339.6442	0.6442012	52	P04637	TP53	Cellular tumor antigen p53	yes	yes	0	0	0	3	0			1			16.405	16.405	2	2.1208E-85	8595	DP1134_3	200.86	136.15			0.44764	0.54656	NaN	1	0	Median	112900000	75117000	37780000	923	52	850	1477	2741;2742	2741		2	9606
SVTNEDVTQEELGGAK	1	0	Unmodified	1675.7901	0.79007339	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.5	0.5			1	1		16.855	16.855	2	9.883799999999999E-290	9300	DP1134_3	272.1	272.1			0.52959	0.63071	7.206	2	0	Median	288510000	194810000	93695000	924	57	851	1478;1479	2743;2744;2745;2746;2747;2748	2743		6	9606
SVVEFLQGYIGVPHGGFPEPFR	0	1	Unmodified	2431.2325	0.23246614	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.25	0.433	3	1				23.529	23.529	2;3	1.6971999999999998E-150	18799	DP1134_1	239.87	226.29			0.26303	0.3249	20.259	2	0	Median	42212000	33439000	8772600	925	78	852	1480;1481;1482;1483	2749;2750;2751;2752;2753;2754;2755;2756;2757;2758;2759;2760	2755		12	9606
SVVTVIDVFYK	1	0	Unmodified	1268.7016	0.70163972	24	CON__Q5D862;Q5D862	FLG2	Filaggrin-2	yes	no	0	0	0	4.5	0.5				1	1	22.193	22.193	2	0.010304	17219	DP1134_5	129.85	94.413		+	NaN	NaN	NaN	0	0	Median	10986000	10986000	0	926	24	853	1484;1485	2761;2762	2762		2	9606
SYCAEIAHNVSSK	1	0	Unmodified	1464.6667	0.66672755	172	P62910	RPL32	60S ribosomal protein L32	yes	yes	0	0	0	5	0					1	16.007	16.007	2	0.0011217	7598	DP1134_5	98.182	66.548			0.48282	0.56336	NaN	1	0	Median	7419000	4738100	2680900	927	172	854	1486	2763	2763		1	9606
SYELPDGQVITIGNER	0	1	Unmodified	1789.8846	0.88464248	146;175	P60709;Q6S8J3;P63267;P68133;P68032;P62736;A5A3E0;Q9BYX7;Q562R1;P63261	ACTB;POTEE;ACTG2;ACTA1;ACTC1;ACTA2;POTEF;POTEKP;ACTBL2;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	no	no	0	0	0	3	0			1			20.724	20.724	2	0.0081278	15599	DP1134_3	109.18	76.653			NaN	NaN	NaN	0	0	Median	23289000	23289000	0	928	146;175	855	1487	2764	2764		1	9606
SYFLYSK	1	0	Unmodified	906.44872	0.4487195	5	CON__ENSEMBL:ENSBTAP00000024462			yes	yes	0	0	0	3	0			1			18.527	18.527	2	0.015304	12019	DP1134_3	134.06	79.27		+	NaN	NaN	NaN	0	0	Median	43932000	43932000	0	929	5	856	1488	2765	2765		1	
SYLENPAFMLLDLK	1	0	Oxidation (M)	1668.8433	0.84329493	77	P11182	DBT	Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial	yes	yes	0	1	0	3	0			1			23.188	23.188	2	0.00058136	19176	DP1134_3	117.09	87.165			0.2571	0.31391	NaN	1	0	Median	7914900	5612400	2302500	930	77	857	1489	2766;2767;2768	2766	83	3	9606
SYLNMDAIMEAIK	1	0	Unmodified	1497.7207	0.72073696	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				23.206	23.206	2	0.011408	19701	DP1134_2	103.34	56.081			NaN	NaN	NaN	0	0	Median	1462600	1462600	0	931	56	858	1490	2769	2769		1	9606
SYLNMDAIMEAIKK	2	0	Oxidation (M)	1641.8106	0.8106146	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	1	1	2	0		1				19.785	19.785	3	0.00027975	14602	DP1134_2	95.428	79.584			0.63535	0.64291	NaN	1	0	Median	14236000	7530500	6705800	932	56	859	1491	2770	2770	62	1	9606
SYLNMDAIMEAIKK	2	0	Unmodified	1625.8157	0.81569997	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	1	2	0		1				21.86	21.86	2	0.032922	17674	DP1134_2	45.915	23.354			0.48983	0.49864	NaN	1	0	Median	10013000	6760700	3252600	933	56	859	1492	2771	2771		0	9606
TAAENDFVTLK	1	0	Unmodified	1207.6085	0.60846762	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	4	0				1		18.177	18.177	2	0.011479	11547	DP1134_4	109.83	64.462		+	NaN	NaN	NaN	0	0	Median	5221100	5221100	0	934	18	860	1493	2772	2772		1	9606
TAAENDFVTLKK	2	0	Unmodified	1335.7034	0.70343063	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	1	1	0	2					16.518	16.518	2;3	1.4187999999999998E-32	8092	DP1134_1	159.34	91.32		+	NaN	NaN	NaN	0	0	Median	193080000	193080000	0	935	18	861	1494;1495	2773;2774	2774		2	9606
TAQIMFQAYGDK	1	0	Oxidation (M)	1387.6442	0.6442012	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					18.003	18.003	2	5.7259E-05	10429	DP1134_1	128.08	99.125			0.64298	0.77696	NaN	1	0	Median	492570000	298630000	193940000	936	199	862	1496	2775;2776	2775	204	2	9606
TAVCDIPPR	0	1	Unmodified	1027.5121	0.51206481	66;179	P07437;P68371;P04350;Q3ZCM7;A6NNZ2	TUBB;TUBB4B;TUBB4A;TUBB8	Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334	no	no	0	0	0	3	0			1			15.425	15.425	2	0.013687	6806	DP1134_3	101.64	43.684			0.30802	0.37654	NaN	1	0	Median	53653000	40705000	12948000	937	66;179	863	1497	2777;2778;2779;2780	2777		4	9606
TCVFEKENDPSVMR	1	1	Oxidation (M)	1726.7655	0.76545532	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					15.844	15.844	3	0.00077692	7029	DP1134_1	79.614	62.473			0.51104	0.61654	NaN	1	0	Median	343200000	226950000	116250000	938	199	864	1498	2781	2781	205	1	9606
TCVFEKENDPSVMR	1	1	Unmodified	1710.7705	0.7705407	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					16.969	16.969	2;3	2.9761E-61	8656	DP1134_1	188.27	132.96			0.45305	0.54658	NaN	1	0	Median	166680000	125350000	41338000	939	199	864	1499;1500	2782;2783;2784;2785;2786	2785		5	9606
TDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFK	1	0	Unmodified	3621.5867	0.58668872	235	Q92804	TAF15	TATA-binding protein-associated factor 2N	yes	yes	0	0	0	2	0		1				23.14	23.14	3	1.8038999999999997E-170	19567	DP1134_2	208.41	208.41			6.0348	7.3656	NaN	1	0	Median	21393000	2050100	19343000	940	235	865	1501	2787;2788;2789;2790;2791;2792;2793	2788		7	9606
TDCDIEDDRLAAMFR	0	2	Oxidation (M)	1842.7876	0.78764732	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					18.789	18.789	3	0.021261	12136	DP1134_1	47.189	35.434			0.64644	0.63698	NaN	1	0	Median	303890000	157850000	146030000	941	199	866	1502	2794	2794	206	1	9606
TDCDIEDDRLAAMFR	0	2	Unmodified	1826.7927	0.7927327	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					20.377	20.377	3	0.0031679	14112	DP1134_1	80.312	61.48			0.63398	0.6247	NaN	1	0	Median	202980000	124900000	78081000	942	199	866	1503	2795;2796	2795		2	9606
TDCNHIFLNFVPTVIMDPSK	1	0	Oxidation (M)	2363.129	0.12898862	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					22.018	22.018	3	1.7203E-08	16591	DP1134_1	121.82	121.82			0.41867	0.50591	NaN	1	0	Median	54053000	38926000	15126000	943	199	867	1504	2797;2798;2799	2797	207	3	9606
TDCNHIFLNFVPTVIMDPSK	1	0	Unmodified	2347.1341	0.134074	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					22.889	22.889	3	1.0316E-06	17859	DP1134_1	125.03	78.683			NaN	NaN	NaN	0	0	Median	0	0	0	944	199	867	1505	2800	2800		1	9606
TDCNHIFLNFVPTVIMDPSKIEESVR	1	1	Oxidation (M)	3076.4998	0.49979215	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					22.159	22.159	3	6.9727E-05	16909	DP1134_1	121.58	92.913			NaN	NaN	NaN	0	0	Median	7035300	7035300	0	945	199	868	1506	2801;2802	2802	207	2	9606
TDFGIFR	0	1	Unmodified	854.42865	0.42865276	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			20.027	20.027	2	0.00094161	14541	DP1134_3	106.76	66.075			0.55356	0.67669	NaN	1	0	Median	952850000	604810000	348040000	946	251	869	1507	2803	2803		1	9606
TDFGIFRM	0	1	Oxidation (M)	1001.4641	0.46405199	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	1	3	0			1			20.127	20.127	2	0.007141	14425	DP1134_3	75.854	51.652			0.63015	0.77032	NaN	1	0	Median	10174000	6584400	3589600	947	251	870	1508	2804	2804	267	1	9606
TEELNKEVASNSELVQSSR	1	1	Unmodified	2119.0393	0.039305217	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	1	3	0			1			17.049	17.049	3	3.0666E-96	9745	DP1134_3	166.3	121.3		+	NaN	NaN	NaN	0	0	Median	144000000	144000000	0	948	14	871	1509	2805	2805		1	9606
TEIIILATR	0	1	Unmodified	1028.623	0.62299547	102	P23396	RPS3	40S ribosomal protein S3	yes	yes	0	0	0	4	0				1		19.378	19.378	2	1.4734E-31	13590	DP1134_4	167.23	130.07			0.52586	0.54149	NaN	1	0	Median	54576000	34085000	20491000	949	102	872	1510	2806	2806		0	9606
TEMEDLMSSKDDVGK	2	0	2 Oxidation (M)	1715.723	0.72298138	118	P35579	MYH9	Myosin-9	yes	yes	0	2	1	1	0	1					14.453	14.453	3	0.0093769	4944	DP1134_1	51.727	43.888			0.45049	0.49412	NaN	1	0	Median	1755400	1170300	585110	950	118	873	1511	2807	2807	119;120	1	9606
TFEDFVR	0	1	Unmodified	912.43413	0.43413207	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					18.89	18.89	1;2	3.0962E-132	11938	DP1134_1	226.98	135.39			0.70829	0.87489	2.1714	2	0	Median	460200000	261370000	198830000	951	199	874	1512;1513	2808;2809;2810;2811;2812;2813;2814;2815;2816	2815		9	9606
TFQVLGNLYSEGDCTYLK	1	0	Unmodified	2106.9932	0.99320665	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		1				21.738	21.738	2	1.8295999999999998E-239	17569	DP1134_2	250.81	207.41			0.65411	0.79835	NaN	1	0	Median	74340000	44628000	29712000	952	241	875	1514	2817;2818;2819;2820;2821;2822	2817		6	9606
TFTDCFNCLPIAAIVDEK	1	0	Unmodified	2112.986	0.98601278	121	P36873;P62136;P62140	PPP1CC;PPP1CA;PPP1CB	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit	yes	no	0	0	0	3	0			1			23.333	23.333	2	2.8043E-62	19428	DP1134_3	185.66	152.34			NaN	NaN	NaN	0	0	Median	8334400	0	8334400	953	121	876	1515	2823;2824;2825	2824		3	9606
TFYNQAIMSSK	1	0	Oxidation (M)	1304.6071	0.60708741	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3	0			1			17.049	17.049	2	2.7886E-13	9657	DP1134_3	155.33	133			0.55075	0.67246	NaN	1	0	Median	1450300000	927000000	523350000	954	251	877	1516	2826;2827;2828;2829	2827	268	4	9606
TFYNQAIMSSK	1	0	Unmodified	1288.6122	0.61217279	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			18.125	18.125	2	1.0731E-28	11526	DP1134_3	170.5	146.98			0.60566	0.7395	NaN	1	0	Median	699680000	435400000	264280000	955	251	877	1517	2830;2831;2832;2833;2834	2832		5	9606
TGAIVDVPVGEELLGR	0	1	Unmodified	1623.8832	0.88318591	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			21.284	21.284	2	1.1788E-23	16290	DP1134_3	172.76	123.45			NaN	NaN	NaN	0	0	Median	0	0	0	956	104	878	1518	2835	2835		1	9606
TGISDVFAK	1	0	Unmodified	936.49165	0.49164694	93	P19338	NCL	Nucleolin	yes	yes	0	0	0	2	0		1				18.63	18.63	2	0.011171	12913	DP1134_2	71.692	11.574			3.3958	4.1447	NaN	1	0	Median	9875400	1612900	8262500	957	93	879	1519	2836	2836		0	9606
TGQPMIHIYLDKETGKPK	3	0	Oxidation (M)	2071.0772	0.077211049	189	Q01844	EWSR1	RNA-binding protein EWS	yes	yes	0	1	2	2	0		1				16.376	16.376	4	0.0052791	9068	DP1134_2	52.112	52.112			5.4426	5.6897	NaN	1	0	Median	54319000	7988400	46331000	958	189	880	1520	2837	2837	174	1	9606
TGQPMIHIYLDKETGKPK	3	0	Unmodified	2055.0823	0.082296426	189	Q01844	EWSR1	RNA-binding protein EWS	yes	yes	0	0	2	2	0		1				17.043	17.043	4	0.035829	10364	DP1134_2	68.129	44.8			NaN	NaN	NaN	0	0	Median	19921000	0	19921000	959	189	880	1521	2838	2838		1	9606
TGQPMINLYTDRETGK	1	1	Oxidation (M)	1838.8833	0.88326227	119	P35637	FUS	RNA-binding protein FUS	yes	yes	0	1	1	2	0		1				17.032	17.032	3	7.2091E-13	10192	DP1134_2	144.88	112.35			NaN	NaN	NaN	0	0	Median	112860000	0	112860000	960	119	881	1522	2839	2839	122	1	9606
TGTAEMSSILEER	0	1	Oxidation (M)	1438.661	0.66097347	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	1	0	3	0			1			16.873	16.873	2	2.5665E-16	9375	DP1134_3	152.64	95.049			NaN	NaN	NaN	0	0	Median	26356000	0	26356000	961	104	882	1523	2840	2840	107	1	9606
THNLEPYFESFINNLR	0	1	Unmodified	1992.9694	0.96937516	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2.83	1.57	2	1		2	1	22.89	22.89	2;3	6.8925E-49	19147	DP1134_2	214.42	155.22		+	NaN	NaN	NaN	0	0	Median	56537000	56537000	0	962	51	883	1524;1525;1526;1527;1528;1529	2841;2842;2843;2844;2845;2846;2847;2848;2849;2850;2851	2845		11	9606
THNLEPYFESFINNLRR	0	2	Unmodified	2149.0705	0.070486187	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	1	2.29	1.03	2	2	2	1		22.121	22.121	3;4	3.3552E-12	16695	DP1134_1	142.1	98.567		+	NaN	NaN	NaN	0	0	Median	137540000	137540000	0	963	51	884	1530;1531;1532;1533;1534;1535;1536	2852;2853;2854;2855;2856;2857;2858;2859;2860;2861;2862;2863;2864	2852		13	9606
THTCPPCPAPELLGGPSVFLFPPKPK	2	0	Unmodified	2843.4503	0.45026318	45	P01857	IGHG1	Ig gamma-1 chain C region	yes	yes	0	0	1	3	0			2			20.884	20.884	3;4	5.8533E-31	15764	DP1134_3	163.18	142.58			NaN	NaN	NaN	0	0	Median	26141000	26141000	0	964	45	885	1537;1538	2865;2866;2867	2867		3	9606
TIAECLADELINAAK	1	0	Unmodified	1630.8236	0.82362212	133	P46782	RPS5	40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed	yes	yes	0	0	0	4	0				1		23.521	23.521	2	1.2824E-48	19771	DP1134_4	176.42	139.74			0.60764	0.70586	NaN	1	0	Median	8427200	4889500	3537600	965	133	886	1539	2868;2869;2870;2871;2872	2869		5	9606
TIGGGDDSFNTFFSETGAGK	1	0	Unmodified	2006.8858	0.88576469	178;246	P68363;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q6PEY2	TUBA1B;TUBA1C;TUBA1A;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain	no	no	0	0	0	3	0			1			21.347	21.347	2	2.1136E-23	16524	DP1134_3	141.65	128.91			0.6549	0.79962	NaN	1	0	Median	164650000	96484000	68168000	966	178;246	887	1540	2873;2874	2874		2	9606
TIQFVDWCPTGFK	1	0	Unmodified	1597.7599	0.75989966	246	Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q6PEY2	TUBA1C;TUBA1A;TUBA8;TUBA3E	Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain	yes	no	0	0	0	3	0			1			21.927	21.927	2	1.9845E-23	17334	DP1134_3	160.77	129.48			0.65266	0.79688	NaN	1	0	Median	21351000	15303000	6048500	967	246	888	1541	2875;2876	2875		2	9606
TIQVENSHLILTGAGALNK	1	0	Unmodified	1978.0847	0.084739268	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					19.091	19.091	2;3	5.1983E-70	12243	DP1134_1	218.78	189.24			0.62928	0.76041	15.917	2	0	Median	645680000	421760000	223920000	968	199	889	1542;1543	2877;2878;2879;2880;2881;2882	2880		6	9606
TITLEVEPSDTIENVK	1	0	Unmodified	1786.92	0.92002493	73	P62987;P62979;P0CG47;P0CG48	UBA52;RPS27A;UBB;UBC	Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin	yes	no	0	0	0	4	0				1		19.676	19.676	2	1.3246E-07	14065	DP1134_4	136.5	73.409			NaN	NaN	NaN	0	0	Median	9226100	9226100	0	969	73	890	1544	2883	2883		1	9606
TKDGVVEITGKHEER	2	1	Unmodified	1696.8744	0.87441214	53	P04792	HSPB1	Heat shock protein beta-1	yes	yes	0	0	2	4	0				1		13.893	13.893	4	0.0019953	5124	DP1134_4	106.3	77.229			NaN	NaN	NaN	0	0	Median	2133600	2133600	0	970	53	891	1545	2884	2884		1	9606
TKGPAREPQVYVLAPPQEELSK	2	1	Unmodified	2436.3013	0.30127398	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	0	2	2.33	0.943	1		2			18.048	18.048	3;4	0.011132	10685	DP1134_1	104.18	65.486		+	NaN	NaN	NaN	0	0	Median	138130000	138130000	0	971	5;6	892	1546;1547;1548	2885;2886;2887	2885		3	
TKTPGPGAQSALR	1	1	Unmodified	1282.6993	0.69934831	158	P62263	RPS14	40S ribosomal protein S14	yes	yes	0	0	1	5	0					1	14.133	14.133	3	1.8638E-32	4940	DP1134_5	167.73	167.73			0.4065	0.44314	NaN	1	0	Median	4083800	2808100	1275700	972	158	893	1549	2888;2889;2890;2891	2890		4	9606
TKYEHELALR	1	1	Unmodified	1258.667	0.66698555	14	CON__P08779;P08779	KRT16	Keratin, type I cytoskeletal 16	yes	no	0	0	1	3	0			1			15.426	15.426	3	0.0037262	7035	DP1134_3	121.61	85.943		+	NaN	NaN	NaN	0	0	Median	223630000	223630000	0	973	14	894	1550	2892	2892		1	9606
TLETVPLER	0	1	Unmodified	1056.5815	0.58152458	99	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	yes	yes	0	0	0	3	0			1			17.501	17.501	2	0.0068495	10426	DP1134_3	123.72	66.161			NaN	NaN	NaN	0	0	Median	0	0	0	974	99	895	1551	2893	2893		1	9606
TLLEGEESR	0	1	Unmodified	1032.5088	0.50875357	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	no	no	0	0	0	3	1.41	1	1	1	1	1	16.041	16.041	2	2.5242E-45	8010	DP1134_4	185.55	118.75		+	NaN	NaN	NaN	0	0	Median	2159800000	2159800000	0	975	51	896	1552;1553;1554;1555;1556	2894;2895;2896;2897;2898;2899;2900;2901;2902;2903	2900		10	9606
TLNDMRQEYEQLIAK	1	1	Unmodified	1850.9196	0.91964777	17	CON__P35527;P35527	KRT9	Keratin, type I cytoskeletal 9	yes	no	0	0	1	2	0		1				20.474	20.474	2	0.030708	15595	DP1134_2	95.508	46.559		+	NaN	NaN	NaN	0	0	Median	0	0	0	976	17	897	1557	2904	2904		1	9606
TLRDPSLPLLELQDIMTSVSGR	0	2	Oxidation (M)	2456.2945	0.29447405	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	2					22.382	22.382	2;3	4.6954E-44	16989	DP1134_1	163.15	121.24			0.41835	0.41223	NaN	1	0	Median	99600000	70588000	29012000	977	199	898	1558;1559	2905;2906;2907;2908;2909;2910;2911	2906	181	7	9606
TLRDPSLPLLELQDIMTSVSGR	0	2	Unmodified	2440.2996	0.29955942	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					24.411	24.411	3	2.6197999999999997E-53	20057	DP1134_1	170.37	170.37			0.33923	0.33426	NaN	1	0	Median	16124000	11928000	4196000	978	199	898	1560	2912;2913;2914;2915;2916;2917;2918;2919	2917		8	9606
TLSDYNIQK	1	0	Unmodified	1080.5451	0.54513908	73	P62987;P62979;P0CG47;P0CG48;A0A2R8Y422	UBA52;RPS27A;UBB;UBC	Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin	yes	no	0	0	0	5	0					1	16.46	16.46	2	0.0086848	8389	DP1134_5	126.28	71.667			NaN	NaN	NaN	0	0	Median	42872000	42872000	0	979	73	899	1561	2920	2920		1	9606
TNAENEFVTIK	1	0	Unmodified	1264.6299	0.62993134	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2	0.816	1	1	1			18.013	18.013	2	1.6762E-13	10631	DP1134_1	151.22	92.624		+	NaN	NaN	NaN	0	0	Median	227630000	227630000	0	980	51	900	1562;1563;1564	2921;2922;2923;2924	2921		4	9606
TNAENEFVTIKK	2	0	Unmodified	1392.7249	0.72489436	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	1	2.2	0.748	1	2	2			16.398	16.398	2;3	1.5372E-143	8603	DP1134_3	227.48	164.16		+	NaN	NaN	NaN	0	0	Median	1095900000	1095900000	0	981	51	901	1565;1566;1567;1568;1569	2925;2926;2927;2928;2929;2930;2931	2930		7	9606
TNMLVQFLMEMYKMKK	3	0	3 Oxidation (M)	2082.0022	0.0021968909	32	O15480	MAGEB3	Melanoma-associated antigen B3	yes	yes	0	3	2	3	1		1		1		20.98	20.98	2	0.025555	15966	DP1134_4	66.267	7.4854			NaN	NaN	NaN	0	0	Median	424420000	424420000	0	982	32	902	1570;1571	2932;2933	2933	36;37;38	2	9606
TNQELQEINR	0	1	Unmodified	1243.6157	0.61567826	65	P07355;A6NMY6	ANXA2;ANXA2P2	Annexin A2;Putative annexin A2-like protein	yes	no	0	0	0	4	0				1		15.817	15.817	2	0.005158	7832	DP1134_4	123.35	58.109			NaN	NaN	NaN	0	0	Median	7693700	7693700	0	983	65	903	1572	2934	2934		1	9606
TPAQYDASELK	1	0	Unmodified	1221.5877	0.58773217	65	P07355;A6NMY6	ANXA2;ANXA2P2	Annexin A2;Putative annexin A2-like protein	yes	no	0	0	0	4	0				1		16.281	16.281	2	1.7747E-08	8334	DP1134_4	152.54	104.94			NaN	NaN	NaN	0	0	Median	15864000	15864000	0	984	65	904	1573	2935	2935		1	9606
TPEVTCVVVDVSHEDPEVK	1	0	Unmodified	2138.0201	0.02014968	45	P01857	IGHG1	Ig gamma-1 chain C region	yes	yes	0	0	0	3	0			1			19.128	19.128	2	5.9726E-135	12977	DP1134_3	277.31	258.21			NaN	NaN	NaN	0	0	Median	14666000	14666000	0	985	45	905	1574	2936	2936		1	9606
TPGPGAQSALR	0	1	Unmodified	1053.5567	0.55670682	158	P62263	RPS14	40S ribosomal protein S14	yes	yes	0	0	0	5	0					1	14.939	14.939	2	2.2556E-08	5922	DP1134_5	145.46	121.69			0.40222	0.41543	NaN	1	0	Median	54158000	38842000	15316000	986	158	906	1575	2937;2938;2939;2940;2941	2938		5	9606
TPLGDTTHTCPR	0	1	Unmodified	1354.6299	0.62994811	47	P01860	IGHG3	Ig gamma-3 chain C region	yes	yes	0	0	0	3	0			1			14.366	14.366	3	4.2012E-24	5435	DP1134_3	159.94	135.08			NaN	NaN	NaN	0	0	Median	6125700	6125700	0	987	47	907	1576	2942;2943	2943		2	9606
TQQAAQANITLQEQIEAIHK	1	0	Unmodified	2234.1655	0.16550878	212	Q15459	SF3A1	Splicing factor 3A subunit 1	yes	yes	0	0	0	2	0		1				18.911	18.911	3	1.3627E-11	13305	DP1134_2	112.14	98.52			0.65375	0.79791	NaN	1	0	Median	17455000	11348000	6107200	988	212	908	1577	2944	2944		0	9606
TRLEQEIATYR	0	2	Unmodified	1378.7205	0.72047768	14;8;19	CON__P02533;P02533;CON__Q6IFX2;CON__A2A4G1;CON__P19012;P19012;CON__Q61782;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT14;KRT15;KRT20;KRT17;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	1	3	0			1			17.724	17.724	2	3.9129E-20	10925	DP1134_3	163.46	103.53		+	NaN	NaN	NaN	0	0	Median	146790000	146790000	0	989	8;19;14	909	1578	2945	2945		1	9606
TRLEQEIATYRR	0	3	Unmodified	1534.8216	0.82158871	14;8;19	CON__P02533;P02533;CON__Q6IFX2;CON__Q61782;CON__P35900;CON__Q9D312;P35900;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT14;KRT20;KRT17;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 20;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	2	3	0			1			17.005	17.005	3	0.025636	9607	DP1134_3	71.806	51.143		+	NaN	NaN	NaN	0	0	Median	0	0	0	990	8;19;14	910	1579	2946	2946		1	9606
TSEKHSVDSVLTALQDSSK	2	0	Unmodified	2031.012	0.012027834	216	Q5T5X7	BEND3	BEN domain-containing protein 3	yes	yes	0	0	1	5	0					1	21.745	21.745	2	2.3322E-07	16591	DP1134_5	89.301	56.677			0.2933	0.31367	NaN	1	0	Median	126650000	98675000	27975000	991	216	911	1580	2947	2947		0	9606
TSEQVCSVLESLEQEYR	0	1	Unmodified	2055.9419	0.94189936	35	O60229	KALRN	Kalirin	yes	yes	0	0	0	2	0		1				22.557	22.557	2	0.012733	18743	DP1134_2	60.598	31.535			2.1594	2.524	NaN	1	0	Median	11741000	3210200	8530600	992	35	912	1581	2948;2949	2949		2	9606
TSQNSELNNMQDLVEDYKK	2	0	Oxidation (M)	2271.0325	0.03250528	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	1	1	2	0		1				17.091	17.091	3	0.0083769	10363	DP1134_2	84.493	66.198		+	NaN	NaN	NaN	0	0	Median	17050000	17050000	0	993	18	913	1582	2950	2950	27	1	9606
TSTAPAASPNVR	0	1	Unmodified	1170.5993	0.59929991	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.5	1.12	1	1	1	1		14.053	14.053	2	8.3137E-145	4434	DP1134_1	228.05	180.48			0.39772	0.46699	10.669	4	0	Median	110010000	77485000	32527000	994	78	914	1583;1584;1585;1586	2951;2952;2953;2954;2955;2956;2957;2958;2959;2960;2961;2962;2963;2964;2965;2966;2967;2968;2969	2952		19	9606
TSTTSSMVASAEQPR	0	1	Oxidation (M)	1567.7148	0.71479996	126	Q6NXS1;P41236	PPP1R2P3;PPP1R2	Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2	yes	no	0	1	0	4	0				1		14.434	14.434	2	0.012165	5731	DP1134_4	107.85	77.234			NaN	NaN	NaN	0	0	Median	1865200	0	1865200	995	126	915	1587	2970	2970	127	1	9606
TTAENEFVMLKK	2	0	Oxidation (M)	1425.7174	0.71736614	16	CON__P13647;P13647	KRT5	Keratin, type II cytoskeletal 5	no	no	0	1	1	2.33	0.943	1		2			16.822	16.822	2;3	0.00099951	8634	DP1134_1	113.38	70.082		+	NaN	NaN	NaN	0	0	Median	124040000	124040000	0	996	16	916	1588;1589;1590	2971;2972;2973;2974	2971	20	4	9606
TTGFGMIYDSLDYAK	1	0	Oxidation (M)	1696.7654	0.76543854	170	P62847	RPS24	40S ribosomal protein S24	yes	yes	0	1	0	5	0					1	20.839	20.839	2	0.022382	15338	DP1134_5	69.229	49.099			NaN	NaN	NaN	0	0	Median	6295200	3789300	2505900	997	170	917	1591	2975	2975	160	1	9606
TTHFVEGGDAGNREDQINR	0	2	Unmodified	2114.973	0.97295699	91	P18124	RPL7	60S ribosomal protein L7	yes	yes	0	0	1	4	0				2		15.158	15.158	3;4	0.002451	6684	DP1134_4	82.663	82.663			0.51963	0.56593	NaN	1	0	Median	37640000	30119000	7521900	998	91	918	1592;1593	2976;2977;2978	2976		3	9606
TTPDVIFVFGFR	0	1	Unmodified	1397.7343	0.73433683	170	P62847	RPS24	40S ribosomal protein S24	yes	yes	0	0	0	4.5	0.5				1	1	23.493	23.493	2	0.00084844	19141	DP1134_5	104.2	67.776			0.58117	0.60026	NaN	1	0	Median	11291000	7954500	3336700	999	170	919	1594;1595	2979;2980;2981;2982;2983	2980		5	9606
TTPPMLDSDGSFFLYSK	1	0	Oxidation (M)	1920.8815	0.88153093	46	P01859	IGHG2	Ig gamma-2 chain C region	yes	yes	0	1	0	3	0			1			21.1	21.1	2	2.1747E-07	15981	DP1134_3	137.81	100.66			NaN	NaN	NaN	0	0	Median	18679000	18679000	0	1000	46	920	1596	2984	2984	49	1	9606
TTPSYVAFTDTER	0	1	Unmodified	1486.694	0.69398816	74;87;76	P0DMV8;P0DMV9;P34931;P17066;P48741;P54652;P11142	HSPA1A;HSPA1B;HSPA1L;HSPA6;HSPA7;HSPA2;HSPA8	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein	no	no	0	0	0	2.5	0.5		1	1			18.619	18.619	2	0.014721	12895	DP1134_2	68.536	46.061			0.90759	1.0608	NaN	1	0	Median	282600000	144410000	138190000	1001	74;87;76	921	1597;1598	2985;2986	2985		2	9606
TTQFSCTLGEK	1	0	Unmodified	1270.5864	0.58635197	188	Q01469	FABP5	Fatty acid-binding protein, epidermal	yes	yes	0	0	0	5	0					1	16.696	16.696	2	6.7498E-14	8743	DP1134_5	155.06	98.626			NaN	NaN	NaN	0	0	Median	29683000	29683000	0	1002	188	922	1599	2987;2988	2987		2	9606
TTQVPQFILDDFIQNDR	0	1	Unmodified	2049.0167	0.016719282	194	Q08211	DHX9	ATP-dependent RNA helicase A	yes	yes	0	0	0	1	0	1					23.25	23.25	2	0.0024384	18391	DP1134_1	102.73	50.886			NaN	NaN	NaN	0	0	Median	0	0	0	1003	194	923	1600	2989	2989		1	9606
TTVEYLIK	1	0	Unmodified	965.54335	0.54334816	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					18.294	18.294	2	0.033646	10978	DP1134_1	60.682	60.682			0.64868	0.78385	NaN	1	0	Median	1175200000	716870000	458370000	1004	199	924	1601	2990	2990		0	9606
TVAAPSVFIFPPSDEQLK	1	0	Unmodified	1945.0197	0.019679395	44	P01834	IGKC	Ig kappa chain C region	yes	yes	0	0	0	4	0				1		21.65	21.65	2	1.1354000000000001E-77	17125	DP1134_4	193	134.87			NaN	NaN	NaN	0	0	Median	50408000	50408000	0	1005	44	925	1602	2991	2991		1	9606
TVAIHSDVDASSVHVK	1	0	Unmodified	1663.8529	0.85294842	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				15.725	15.725	4	0.023234	7960	DP1134_2	51.466	30.113			0.50296	0.61387	NaN	1	0	Median	41659000	22604000	19055000	1006	56	926	1603	2992	2992		0	9606
TVAIYSEQDTGQMHR	0	1	Oxidation (M)	1750.7944	0.79444726	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	2.86	1.46	2	1	1	2	1	15.509	15.509	2;3	5.4938E-16	6449	DP1134_1	145.52	121.53			0.62226	0.70826	12.494	5	0	Median	2223100000	1384300000	838840000	1007	78	927	1604;1605;1606;1607;1608;1609;1610	2993;2994;2995;2996;2997;2998;2999;3000;3001;3002;3003;3004;3005;3006;3007	2994	98	15	9606
TVAIYSEQDTGQMHR	0	1	Unmodified	1734.7995	0.79953264	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.6	1.62	2	1		1	1	16.326	16.326	2;3	4.0394E-93	7846	DP1134_1	201.08	173.88			0.59006	0.82388	15.415	4	0	Linear	452420000	263370000	189050000	1008	78	927	1611;1612;1613;1614;1615	3008;3009;3010;3011;3012;3013;3014;3015;3016;3017;3018;3019;3020	3008		13	9606
TVELSIPADPANLDSEAK	1	0	Unmodified	1868.9367	0.93673763	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	2	0.707	1	2	1			20.019	20.019	2	1.2851000000000001E-162	13640	DP1134_1	231.52	204.81			0.40856	0.4937	NaN	1	0	Median	315280000	231800000	83472000	1009	199	928	1616;1617;1618;1619	3021;3022;3023;3024;3025;3026;3027	3022		7	9606
TVGIVGNQPK	1	0	Unmodified	1011.5713	0.57129425	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.5	0.5			1	1		15.18	15.18	2	5.7316E-08	6629	DP1134_3	145.34	114.04			0.6668	0.79412	47.949	2	0	Median	148540000	102390000	46146000	1010	57	929	1620;1621	3028;3029;3030;3031;3032	3028		5	9606
TVMENFVAFVDK	1	0	Oxidation (M)	1414.6803	0.68025235	13	CON__P02769			yes	yes	0	1	0	2	0		1				20.425	20.425	2	0.00019066	15529	DP1134_2	124.67	56.043		+	NaN	NaN	NaN	0	0	Median	71547000	71547000	0	1011	13	930	1622	3033	3033	12	1	
TVMENFVAFVDK	1	0	Unmodified	1398.6853	0.68533773	13	CON__P02769			yes	yes	0	0	0	3	0			1			22.368	22.368	2	0.0082304	17950	DP1134_3	125.75	85.688		+	NaN	NaN	NaN	0	0	Median	13188000	13188000	0	1012	13	930	1623	3034	3034		1	
TVTAMDVVYALK	1	0	Unmodified	1309.6952	0.69517413	167	P62805	HIST1H4A	Histone H4	yes	yes	0	0	0	5	0					1	21.418	21.418	2	0.0010612	16191	DP1134_5	92.538	45.352			0.43407	0.50648	NaN	1	0	Median	53160000	35415000	17745000	1013	167	931	1624	3035;3036;3037	3035		3	9606
TVTAMDVVYALKR	1	1	Oxidation (M)	1481.7912	0.79119978	167	P62805	HIST1H4A	Histone H4	yes	yes	0	1	1	5	0					2	19.021	19.021	2;3	4.5595E-05	12614	DP1134_5	114.71	94.283			0.57072	0.62216	NaN	1	0	Median	60890000	33156000	27734000	1014	167	932	1625;1626	3038;3039;3040;3041;3042	3039	158	5	9606
TVTAMDVVYALKR	1	1	Unmodified	1465.7963	0.79628516	167	P62805	HIST1H4A	Histone H4	yes	yes	0	0	1	5	0					1	20.307	20.307	3	0.0027467	14575	DP1134_5	69.864	45.512			0.48815	0.53215	NaN	1	0	Median	101290000	62982000	38304000	1015	167	932	1627	3043;3044	3043		2	9606
TYLFLQEYLDAIKK	2	0	Unmodified	1743.9447	0.94472354	110	P29508	SERPINB3	Serpin B3	yes	yes	0	0	1	4	0				2		22.668	22.668	2;3	2.0776E-61	18495	DP1134_4	184.36	117.15			NaN	NaN	NaN	0	0	Median	12817000	12817000	0	1016	110	933	1628;1629	3045;3046;3047;3048;3049	3047		5	9606
TYLISSIPLQGAFNYK	1	0	Unmodified	1813.9614	0.96143623	81	P12273	PIP	Prolactin-inducible protein	yes	yes	0	0	0	5	0					1	22.162	22.162	2	3.8598E-05	17226	DP1134_5	164.04	129.34			NaN	NaN	NaN	0	0	Median	4317300	4317300	0	1017	81	934	1630	3050	3050		1	9606
TYQAIKDFNR	1	1	Unmodified	1254.6357	0.63568542	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					16.424	16.424	2;3	7.7932E-38	7779	DP1134_1	154.01	121.79			0.60176	0.726	1.1524	2	0	Median	326260000	201280000	124980000	1018	199	935	1631;1632	3051;3052;3053	3051		2	9606
TYQFLQEYLDAIKK	2	0	Unmodified	1758.9192	0.91923707	135	P48594	SERPINB4	Serpin B4	yes	yes	0	0	1	4	0				1		21.934	21.934	3	4.3229E-13	17436	DP1134_4	143.94	102.2			NaN	NaN	NaN	0	0	Median	12567000	12567000	0	1019	135	936	1633	3054	3054		1	9606
TYQGSYGFR	0	1	Unmodified	1077.488	0.48795855	52	P04637	TP53	Cellular tumor antigen p53	yes	yes	0	0	0	3	0			1			17.049	17.049	2	0.0172	9729	DP1134_3	113.41	96.047			NaN	NaN	NaN	0	0	Median	84704000	84704000	0	1020	52	937	1634	3055	3055		1	9606
TYSLLNLDYCGDVDR	0	1	Unmodified	1802.8145	0.814514	273				yes	yes	0	0	0	1	0	1					23.014	23.014	2	0.0048875	18086	DP1134_1	103.31	54.123	+		0.50108	0.61894	NaN	1	0	Median	6799200	4233200	2566000	1021	273	938	1635	3056	3056		1	9606
VAQLEQVYIR	0	1	Unmodified	1217.6768	0.67682195	163	P62318	SNRPD3	Small nuclear ribonucleoprotein Sm D3	yes	yes	0	0	0	5	0					1	18.534	18.534	2	0.00023868	11699	DP1134_5	146.81	90.552			NaN	NaN	NaN	0	0	Median	0	0	0	1022	163	939	1636	3057	3057		1	9606
VASGCLDINSSVK	1	0	Unmodified	1348.6657	0.66566492	57	P05166	PCCB	Propionyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			16.949	16.949	2	5.2911E-16	9460	DP1134_3	150.09	118.46			0.4851	0.5923	NaN	1	0	Median	237160000	158150000	79014000	1023	57	940	1637	3058;3059;3060	3058		3	9606
VASLEESEGNKQDLK	2	0	Unmodified	1645.8159	0.81589421	193	Q07065	CKAP4	Cytoskeleton-associated protein 4	yes	yes	0	0	1	2	0		1				15.006	15.006	3	0.00014665	6963	DP1134_2	116.19	116.19			0.46539	0.46242	NaN	1	0	Median	41434000	27790000	13644000	1024	193	941	1638	3061	3061		1	9606
VATVSLPR	0	1	Unmodified	841.50215	0.50215205	7	CON__P00761			yes	yes	0	0	0	3.75	1.3		1	1		2	16.71	16.71	1;2	3.094E-104	8507	DP1134_5	221.25	72.925		+	NaN	NaN	NaN	0	0	Median	63799000000	63799000000	0	1025	7	942	1639;1640;1641;1642	3062;3063;3064;3065;3066;3067;3068;3069;3070	3070		9	
VATWFNQPAR	0	1	Unmodified	1188.604	0.60399136	105	P26373	RPL13	60S ribosomal protein L13	yes	yes	0	0	0	4	0				1		18.778	18.778	2	0.0017981	12697	DP1134_4	130.27	92.723			0.62288	0.64139	NaN	1	0	Median	18364000	11008000	7355600	1026	105	943	1643	3071;3072;3073	3071		3	9606
VAYVSFGPHAGK	1	0	Unmodified	1231.635	0.63495714	139	P50914	RPL14	60S ribosomal protein L14	yes	yes	0	0	0	4	0				1		16.907	16.907	3	0.0038578	9527	DP1134_4	80.834	58.495			0.64995	0.755	NaN	1	0	Median	35579000	21354000	14225000	1027	139	944	1644	3074;3075	3074		2	9606
VDALMDEINFMK	1	0	Oxidation (M)	1440.6629	0.66288773	16	CON__P13647;P13647	KRT5	Keratin, type II cytoskeletal 5	no	no	0	1	0	3	0			1			20.527	20.527	2	0.014747	15476	DP1134_3	111.27	79.257		+	NaN	NaN	NaN	0	0	Median	13094000	13094000	0	1028	16	945	1645	3076	3076	21	1	9606
VDGVTQSSSNFQNSFTDQDSKK	2	0	Unmodified	2418.0935	0.093525632	20	CON__Q05B55			yes	yes	0	0	1	4	0				1		17.378	17.378	3	0.0038367	10378	DP1134_4	97.69	75.849		+	NaN	NaN	NaN	0	0	Median	25704000	25704000	0	1029	20	946	1646	3077	3077		1	
VDLLNQEIEFLK	1	0	Unmodified	1459.7922	0.79224564	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	3	1.41	1	1	1	1	1	22.488	22.488	2	2.9935E-103	17341	DP1134_1	210.64	144.37		+	NaN	NaN	NaN	0	0	Median	170020000	170020000	0	1030	18	947	1647;1648;1649;1650;1651	3078;3079;3080;3081;3082;3083;3084;3085;3086;3087	3078		10	9606
VDNALQSGNSQESVTEQDSK	1	0	Unmodified	2134.9614	0.96144883	44	P01834	IGKC	Ig kappa chain C region	yes	yes	0	0	0	4	0				1		15.652	15.652	2	2.7545E-212	7529	DP1134_4	249.82	214.06			NaN	NaN	NaN	0	0	Median	33362000	33362000	0	1031	44	948	1652	3088	3088		1	9606
VDSGIQPGSDISIYYDPMISK	1	0	Unmodified	2284.0933	0.093314623	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				21.592	21.592	2	4.1388E-33	17342	DP1134_2	155.06	139.77			0.32508	0.39677	NaN	1	0	Median	16375000	12245000	4130000	1032	56	949	1653	3089;3090;3091	3089		3	9606
VDWQENDFSK	1	0	Unmodified	1266.5517	0.55168102	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					18.394	18.394	2	0.014323	11191	DP1134_1	99.688	75.168			0.50792	0.61377	NaN	1	0	Median	294090000	187650000	106440000	1033	199	950	1654	3092	3092		1	9606
VDWQENDFSKR	1	1	Unmodified	1422.6528	0.65279205	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	1					17.318	17.318	3	0.00075028	9370	DP1134_1	115.57	75.077			0.56966	0.68726	NaN	1	0	Median	476020000	282480000	193540000	1034	199	951	1655	3093	3093		1	9606
VEGDVDVPK	1	0	Unmodified	956.48148	0.48147619	239	Q96QA5	GSDMA	Gasdermin-A	yes	yes	0	0	0	4	0				1		15.243	15.243	2	0.0073192	6782	DP1134_4	127.46	34.266			NaN	NaN	NaN	0	0	Median	0	0	0	1035	239	952	1656	3094	3094		1	9606
VEGRPGASLPPLDLQALEK	1	1	Unmodified	1989.0895	0.089490294	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	1.75	0.829	2	1	1			20.16	20.16	2;3	1.1523E-21	13843	DP1134_1	147.1	128.94			0.29704	0.35836	NaN	1	0	Median	1335100000	1067099999.9999999	268000000	1036	78	953	1657;1658;1659;1660	3095;3096;3097;3098;3099;3100;3101	3095		7	9606
VEGRPGASLPPLDLQALEKELVDR	1	2	Unmodified	2601.4126	0.41261535	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	2	1	0	2					22.095	22.095	3;4	5.8633E-06	16764	DP1134_1	73.153	59.26			0.27987	0.28011	NaN	1	0	Median	25299000	20054000	5244800	1037	78	954	1661;1662	3102;3103	3102		2	9606
VEILANDQGNR	0	1	Unmodified	1227.6208	0.62076364	87	P17066;P48741	HSPA6;HSPA7	Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7	yes	no	0	0	0	3.5	1.5		1			1	15.827	15.827	2	5.0505E-65	8290	DP1134_2	191.85	0			0.42025	0.46175	105.87	2	0	Median	78889000	45892000	32997000	1038	87	955	1663;1664	3104;3105;3106;3107;3108;3109	3104		6	9606
VEKMAAMKEK	3	0	2 Oxidation (M)	1195.5941	0.59407988	206	Q14966	ZNF638	Zinc finger protein 638	yes	yes	0	2	2	4	0				1		19.029	19.029	2	0.003577	13027	DP1134_4	122.18	14.602			NaN	NaN	NaN	0	0	Median	0	0	0	1039	206	956	1665	3110	3110	213;214	1	9606
VETGVLKPGMVVTFAPVNVTTEVK	2	0	Oxidation (M)	2530.3717	0.37166174	177	P68104;Q5VTE0	EEF1A1;EEF1A1P5	Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3	yes	no	0	1	1	3	0			1			20.048	20.048	3	0.0024658	14555	DP1134_3	49.902	49.902			0.39369	0.41888	NaN	1	0	Median	37271000	28320000	8951600	1040	177	957	1666	3111	3111	164	1	9606
VETQFQNGHYDK	1	0	Unmodified	1464.6634	0.66335673	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					15.004	15.004	3	2.9463E-05	5604	DP1134_1	120.53	97.014			0.686	0.82895	NaN	1	0	Median	322200000	194250000	127950000	1041	199	958	1667	3112;3113	3112		2	9606
VEVGTEVTDYR	0	1	Unmodified	1266.6092	0.6091959	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					17.318	17.318	2	6.5183E-20	9485	DP1134_1	159.79	112.71			0.74756	0.92339	NaN	1	0	Median	721690000	422170000	299520000	1042	199	959	1668	3114;3115;3116;3117	3116		4	9606
VFDEFKPLVEEPQNLIK	2	0	Unmodified	2044.0881	0.088093311	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	1	2	0		1				21.283	21.283	3	0.0065351	16837	DP1134_2	102.72	78.607		+	NaN	NaN	NaN	0	0	Median	17769000	17769000	0	1043	12	960	1669	3118	3118		1	9606
VFDYSEYWEGAR	0	1	Unmodified	1520.6572	0.65720872	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	1	1				20.97	20.97	2	9.7172E-43	15137	DP1134_1	177.06	159.17			0.63587	0.78544	NaN	1	0	Median	203040000	116700000	86339000	1044	78	961	1670;1671	3119;3120;3121;3122;3123	3119		5	9606
VFIGNLNTLVVK	1	0	Unmodified	1315.7864	0.7863724	67	P07910;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8	HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2	Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2	yes	no	0	0	0	3	0			1			20.824	20.824	2	0.0013962	15746	DP1134_3	98.044	98.044			3.578	4.3686	NaN	1	0	Median	22073000	3859100	18214000	1045	67	962	1672	3124	3124		1	9606
VFLENVIR	0	1	Unmodified	988.57057	0.57056597	167	P62805	HIST1H4A	Histone H4	yes	yes	0	0	0	2.67	1.7	1	1			1	19.857	19.857	2	0.00034658	13796	DP1134_5	138.24	80.683			0.55846	0.57681	NaN	1	0	Median	323190000	235320000	87876000	1046	167	963	1673;1674;1675	3125;3126;3127;3128;3129	3127		5	9606
VFTTQELVQAFTHAPATLEADR	0	1	Unmodified	2444.2336	0.23358835	42	O95433	AHSA1	Activator of 90 kDa heat shock protein ATPase homolog 1	yes	yes	0	0	0	3	0			1			22.948	22.948	3	4.084E-06	18860	DP1134_3	109.89	109.89			0.39847	0.4871	NaN	1	0	Median	7609400	4585800	3023500	1047	42	964	1676	3130;3131;3132	3130		3	9606
VGEVTYVELLMDAEGK	1	0	Oxidation (M)	1767.8601	0.86006721	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	1	0	2	0		1				22.271	22.271	2	0.0062784	18277	DP1134_2	109.84	64.588			0.68325	0.83392	NaN	1	0	Median	22081000	13406000	8675100	1048	142	965	1677	3133;3134	3133	148	2	9606
VGEVTYVELLMDAEGK	1	0	Unmodified	1751.8652	0.86515259	142	P52272	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	yes	yes	0	0	0	2	0		1				23.166	23.166	2	2.9077E-131	19603	DP1134_2	216.68	178.38			0.70634	0.8621	NaN	1	0	Median	10702000	6184800	4516800	1049	142	965	1678	3135;3136;3137;3138	3135		4	9606
VGINYQPPTVVPGGDLAK	1	0	Unmodified	1823.9781	0.97814893	178;246	P68363;P68366;Q9BQE3;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q6PEY2	TUBA1B;TUBA4A;TUBA1C;TUBA1A;TUBA8;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain	no	no	0	0	0	3	0			1			19.628	19.628	2	0.0023396	13914	DP1134_3	122.52	69.283			NaN	NaN	NaN	0	0	Median	196560000	196560000	0	1050	178;246	966	1679	3139	3139		1	9606
VGNLGLATSFFNER	0	1	Unmodified	1523.7732	0.77324153	27	O00571	DDX3X	ATP-dependent RNA helicase DDX3X	yes	yes	0	0	0	2	0		2				21.684	21.684	2	7.1531E-202	17411	DP1134_2	249.83	189.14			NaN	NaN	NaN	0	0	Median	21393000	0	21393000	1051	27	967	1680;1681	3140;3141;3142;3143	3141		4	9606
VGWEQLLTTIAR	0	1	Unmodified	1385.7667	0.76669959	34	P12814;O43707	ACTN1;ACTN4	Alpha-actinin-1;Alpha-actinin-4	yes	no	0	0	0	2	0		1				23.63	23.63	2	3.8277E-05	20282	DP1134_2	126.39	87.82			0.36991	0.43236	NaN	1	0	Median	5483200	3829200	1654000	1052	34	968	1682	3144;3145;3146	3145		3	9606
VHIDIGADGR	0	1	Unmodified	1051.5411	0.54105675	112	P31942	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	yes	yes	0	0	0	3.67	0.471			1	2		16.095	16.095	2;3	1.5924E-13	8171	DP1134_4	155.58	97.773			5.2608	5.9023	17.259	2	0	Median	226130000	19814000	206310000	1053	112	969	1683;1684;1685	3147;3148;3149;3150;3151;3152;3153;3154	3152		8	9606
VHIEIGPDGR	0	1	Unmodified	1091.5724	0.57235688	113;145;143	P31943;P55795;P52597	HNRNPH1;HNRNPH2;HNRNPF	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed	no	no	0	0	0	3	0			2			16.305	16.305	2;3	0.010696	8601	DP1134_3	119.21	119.21			2.2567	2.7587	2.6003	2	0	Median	184440000	54109000	130330000	1054	113;145;143	970	1686;1687	3155;3156	3155		2	9606
VHKECCHGDLLECADDRADLAK	2	1	Unmodified	2611.1577	0.15773934	13	CON__P02769			yes	yes	0	0	2	2.25	1.09	1	2		1		16.33	16.33	4;5	0.002474	9100	DP1134_2	112.44	86.821		+	NaN	NaN	NaN	0	0	Median	266040000	266040000	0	1055	13	971	1688;1689;1690;1691	3157;3158;3159;3160;3161	3159		5	
VHNEGLPAPIVR	0	1	Unmodified	1300.7252	0.72516913	5;6	CON__ENSEMBL:ENSBTAP00000024462;CON__ENSEMBL:ENSBTAP00000024466			no	no	0	0	0	2	0.816	2	2	2			16.719	16.719	2;3	1.1741E-85	8423	DP1134_1	202.2	146.83		+	NaN	NaN	NaN	0	0	Median	560160000	560160000	0	1056	5;6	972	1692;1693;1694;1695;1696;1697	3162;3163;3164;3165;3166;3167;3168;3169;3170;3171;3172;3173	3166		12	
VHTECCHGDLLECADDRADLAK	1	1	Unmodified	2584.1105	0.1104548	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	1	2	0		1				16.896	16.896	4	0.011947	9960	DP1134_2	72.968	54.196		+	NaN	NaN	NaN	0	0	Median	40429000	40429000	0	1057	12	973	1698	3174	3174		1	9606
VIEHIMEDLDTNADK	1	0	Oxidation (M)	1757.8142	0.81417965	60	P06702	S100A9	Protein S100-A9	yes	yes	0	1	0	5	0					2	16.822	16.822	2;3	1.6183E-22	8840	DP1134_5	168.76	128.74			NaN	NaN	NaN	0	0	Median	22176000	22176000	0	1058	60	974	1699;1700	3175;3176;3177	3177	69	3	9606
VIGIDHIK	1	0	Unmodified	893.53345	0.53345218	96	P22061	PCMT1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase	yes	yes	0	0	0	4	0				1		16.124	16.124	2	0.0027089	8167	DP1134_4	79.469	37.966			0.60228	0.69963	NaN	1	0	Median	4628600	2812700	1815900	1059	96	975	1701	3178	3178		0	9606
VILHLKEDQTEYLEER	1	1	Unmodified	2014.0371	0.037120373	68	P08238;Q58FF7	HSP90AB1;HSP90AB3P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3	no	no	0	0	1	2	0		1				18.11	18.11	3	0.027419	12078	DP1134_2	54.393	24.926			0.75219	0.76835	NaN	1	0	Median	13288000	8208100	5079600	1060	68	976	1702	3179	3179		1	9606
VITEEEKNFK	2	0	Unmodified	1235.6398	0.63976774	105	P26373	RPL13	60S ribosomal protein L13	yes	yes	0	0	1	4	0				1		15.065	15.065	2	0.014259	6575	DP1134_4	123.98	73.857			NaN	NaN	NaN	0	0	Median	11488000	0	11488000	1061	105	977	1703	3180	3180		1	9606
VLDELTLAR	0	1	Unmodified	1028.5866	0.58660996	14;8;19	CON__P02533;P02533;CON__Q6IFX2;CON__A2A4G1;CON__P19012;P19012;CON__P08727;CON__P19001;P08727;CON__Q04695;Q04695;CON__Q9QWL7;CON__P08779;P08779	KRT14;KRT15;KRT19;KRT17;KRT16	Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16	no	no	0	0	0	4	0				1		19.001	19.001	2	0.027451	13099	DP1134_4	101.6	36.797		+	NaN	NaN	NaN	0	0	Median	3813000	3813000	0	1062	8;19;14	978	1704	3181	3181		1	9606
VLDELTLTK	1	0	Unmodified	1030.591	0.59102664	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			18.727	18.727	2	8.2221E-17	12406	DP1134_3	162.25	63.794		+	NaN	NaN	NaN	0	0	Median	203310000	203310000	0	1063	15	979	1705	3182	3182		1	9606
VLGMDPLPSK	1	0	Oxidation (M)	1071.5634	0.56343168	196	Q12906	ILF3	Interleukin enhancer-binding factor 3	yes	yes	0	1	0	3.5	1.5		1			1	16.16	16.16	2;3	0.021082	9988	DP1134_2	116.37	80.038			NaN	NaN	NaN	0	0	Median	9678300	1098300	8580000	1064	196	980	1706;1707	3183;3184	3183	177	2	9606
VLHFDQVTENTTEK	1	0	Unmodified	1659.8104	0.8104149	135	P48594	SERPINB4	Serpin B4	yes	yes	0	0	0	4	0				1		17.091	17.091	3	0.0028392	9922	DP1134_4	100.11	67.499			NaN	NaN	NaN	0	0	Median	8906700	8906700	0	1065	135	981	1708	3185	3185		1	9606
VLHFDQVTENTTGK	1	0	Unmodified	1587.7893	0.78928553	110	P29508	SERPINB3	Serpin B3	yes	yes	0	0	0	3	0			1			17.159	17.159	3	0.021051	9859	DP1134_3	99.991	77.498			NaN	NaN	NaN	0	0	Median	0	0	0	1066	110	982	1709	3186	3186		1	9606
VLIANNGIAAVK	1	0	Unmodified	1181.7132	0.71320746	199;28	O00763;Q13085	ACACB;ACACA	Acetyl-CoA carboxylase 2;Biotin carboxylase;Acetyl-CoA carboxylase 1;Biotin carboxylase	no	no	0	0	0	1	0	1					17.902	17.902	2	0.0081415	10328	DP1134_1	88.177	88.177			0.55544	0.67119	NaN	1	0	Median	909300000	569410000	339890000	1067	28;199	983	1710	3187	3187		0	9606
VLKDLPR	1	1	Unmodified	839.52289	0.52288749	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	1	2	0		1				15.106	15.106	3	0.034158	7143	DP1134_2	79.451	33.499			0.37304	0.38106	NaN	1	0	Median	10288000	7580500	2707500	1068	78	984	1711	3188	3188		1	9606
VLKQVHPDTGISSK	2	0	Unmodified	1507.8358	0.83584179	36;62	Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08;Q8N257;Q16778;P33778;P23527;P06899	HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ	Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J	no	no	0	0	1	5	0					1	14.361	14.361	3	0.0037768	5150	DP1134_5	125.03	86.359			NaN	NaN	NaN	0	0	Median	2395700	2395700	0	1069	36;62	985	1712	3189	3189		1	9606
VLNTNIDGR	0	1	Unmodified	1000.5302	0.53015772	160	P62269	RPS18	40S ribosomal protein S18	yes	yes	0	0	0	5	0					1	15.8	15.8	2	0.013854	7298	DP1134_5	114.5	90.729			0.56778	0.58643	NaN	1	0	Median	11932000	7499100	4432900	1070	160	986	1713	3190;3191	3191		2	9606
VLPSIVNEVLK	1	0	Unmodified	1209.7333	0.7332742	243	Q99623	PHB2	Prohibitin-2	yes	yes	0	0	0	4	0				1		21.186	21.186	2	0.0075185	16400	DP1134_4	86.898	55.476			0.38713	0.4497	NaN	1	0	Median	15831000	11251000	4579100	1071	243	987	1714	3192	3192		1	9606
VLSIGDGIAR	0	1	Unmodified	999.57129	0.57129425	104	P25705	ATP5A1	ATP synthase subunit alpha, mitochondrial	yes	yes	0	0	0	3	0			1			18.225	18.225	2	0.010888	11741	DP1134_3	111.95	44.915			0.76143	0.93079	NaN	1	0	Median	64901000	38601000	26301000	1072	104	988	1715	3193;3194	3194		2	9606
VLSRPNAQELPSMYQR	0	2	Unmodified	1887.9625	0.96251564	243	Q99623	PHB2	Prohibitin-2	yes	yes	0	0	1	4	0				1		17.727	17.727	3	0.0046888	10796	DP1134_4	78.191	57.454			0.46409	0.50544	NaN	1	0	Median	5485600	3446400	2039200	1073	243	989	1716	3195;3196	3195		2	9606
VLTQPSSVSGSLGQR	0	1	Unmodified	1514.8053	0.80526994	4	CON__ENSEMBL:ENSBTAP00000014147			yes	yes	0	0	0	4	0				1		16.961	16.961	2	1.8803999999999998E-256	9627	DP1134_4	261.52	174.04		+	NaN	NaN	NaN	0	0	Median	74704000	74704000	0	1074	4	990	1717	3197;3198	3197		2	
VLYDAEISQIHQSVTDTNVILSMDNSR	0	1	Oxidation (M)	3063.4819	0.48189348	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	1	0	2	0		1				21.009	21.009	3	0.022657	16529	DP1134_2	41.562	11.825		+	NaN	NaN	NaN	0	0	Median	27133000	27133000	0	1075	18	991	1718	3199	3199	28	1	9606
VMVANRGEIAIR	0	2	Oxidation (M)	1343.7344	0.73435361	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	1	1	0	1					16.025	16.025	3	0.034574	7133	DP1134_1	66.92	32.118			NaN	NaN	NaN	0	0	Median	59414000	59414000	0	1076	78	992	1719	3200	3200	99	1	9606
VNLLYSR	0	1	Unmodified	863.4865	0.48650199	197	Q13011	ECH1	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial	yes	yes	0	0	0	4	0				1		17.678	17.678	2	2.3551E-05	10906	DP1134_4	128.86	86.387			0.6524	0.67179	NaN	1	0	Median	13216000	8061400	5155100	1077	197	993	1720	3201	3201		0	9606
VNTLIRPDGEKK	2	1	Unmodified	1368.7725	0.77251325	165	P62750	RPL23A	60S ribosomal protein L23a	yes	yes	0	0	2	4	0				1		14.187	14.187	3	0.0013144	5422	DP1134_4	92.112	56.348			0.47826	0.51912	NaN	1	0	Median	2914400	1746400	1168000	1078	165	994	1721	3202;3203	3202		2	9606
VQAERPDTMLGVVCGALHVADVSLR	0	2	Unmodified	2692.3789	0.37888915	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					22.539	22.539	3;4	2.3249E-14	17361	DP1134_1	142.23	117.68			NaN	NaN	NaN	0	0	Median	10630000	10630000	0	1079	199	995	1722;1723	3204;3205;3206	3206		3	9606
VQEQVHTLLSQDQAQAAR	0	1	Unmodified	2021.029	0.029015303	193	Q07065	CKAP4	Cytoskeleton-associated protein 4	yes	yes	0	0	0	2	0		1				16.968	16.968	3	0.00065284	10117	DP1134_2	101.67	101.67			0.50583	0.59123	NaN	1	0	Median	67441000	43949000	23492000	1080	193	996	1724	3207	3207		1	9606
VQQAELHTGSLPR	0	1	Unmodified	1434.7579	0.75792582	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					15.845	15.845	2;3	1.4595E-220	6882	DP1134_1	232.56	185.33			0.49258	0.60844	9.9308	2	0	Median	916380000	589560000	326820000	1081	199	997	1725;1726	3208;3209;3210;3211;3212;3213;3214;3215	3209		8	9606
VQSLQATFGTFESILR	0	1	Unmodified	1795.9468	0.9468488	193	Q07065	CKAP4	Cytoskeleton-associated protein 4	yes	yes	0	0	0	2	0		2				23.651	23.651	2	4.6283E-177	20314	DP1134_2	237.67	162.16			NaN	NaN	NaN	0	0	Median	4113200	4113200	0	1082	193	998	1727;1728	3216;3217;3218	3216		3	9606
VSALNSVHCEHVEDEGESR	0	1	Unmodified	2152.9444	0.94435897	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	2					15.457	15.457	3;4	3.1127E-163	6290	DP1134_1	229.69	212.76			0.62264	0.76909	13.821	2	0	Median	1591699999.9999998	903840000	687860000	1083	199	999	1729;1730	3219;3220;3221;3222;3223;3224;3225;3226;3227	3226		9	9606
VSALNSVHCEHVEDEGESRYK	1	1	Unmodified	2444.1027	0.10265053	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					15.644	15.644	4;5	0.00037296	6587	DP1134_1	70.555	59.465			NaN	NaN	NaN	0	0	Median	49676000	17904000	31772000	1084	199	1000	1731;1732	3228;3229	3228		2	9606
VSGVECMIIANDATVK	1	0	Oxidation (M)	1721.8328	0.8328066	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	1	0	3	0			1			18.225	18.225	2	4.4537E-13	11471	DP1134_3	139.78	111.2			0.54803	0.66913	NaN	1	0	Median	756670000	471370000	285300000	1085	251	1001	1733	3230;3231	3230	269	2	9606
VSGVECMIIANDATVK	1	0	Unmodified	1705.8379	0.83789198	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3	0			1			19.728	19.728	2	0.0040915	13949	DP1134_3	101.72	60.992			0.56444	0.68916	NaN	1	0	Median	499080000	316610000	182480000	1086	251	1001	1734	3232;3233;3234	3232		3	9606
VSISEGDDKIEYR	1	1	Unmodified	1509.7311	0.73110195	97	P22087	FBL	rRNA 2'-O-methyltransferase fibrillarin	yes	yes	0	0	1	4	0				1		16.823	16.823	3	0.0215	9339	DP1134_4	49.483	18.005			1.1031	1.1853	NaN	1	0	Median	6428700	2741500	3687200	1087	97	1002	1735	3235	3235		0	9606
VSITCSGSSNNIGR	0	1	Unmodified	1450.6834	0.68344025	4	CON__ENSEMBL:ENSBTAP00000014147			yes	yes	0	0	0	4	0				1		15.894	15.894	2	0	7804	DP1134_4	280.09	176.03		+	NaN	NaN	NaN	0	0	Median	9802800	9802800	0	1088	4	1003	1736	3236;3237	3236		2	
VSLDVNHFAPDELTVK	1	0	Unmodified	1782.9152	0.91521432	53	P04792	HSPB1	Heat shock protein beta-1	yes	yes	0	0	0	4	0				1		19.715	19.715	2	8.222999999999999E-88	14095	DP1134_4	224.05	152.5			NaN	NaN	NaN	0	0	Median	0	0	0	1089	53	1004	1737	3238	3238		1	9606
VTEDTSSVLR	0	1	Unmodified	1105.5615	0.56151742	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				15.978	15.978	2	3.5160999999999997E-65	8436	DP1134_2	197.3	134.58			0.49234	0.57546	NaN	1	0	Median	160890000	105530000	55362000	1090	56	1005	1738	3239;3240;3241	3240		3	9606
VTGEADVEFATHEDAVAAMSK	1	0	Oxidation (M)	2192.9896	0.98957783	113	P31943	HNRNPH1	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed	yes	yes	0	1	0	3	0			1			17.724	17.724	3	0.010931	10961	DP1134_3	75.057	50.65			NaN	NaN	NaN	0	0	Median	49671000	0	49671000	1091	113	1006	1739	3242	3242	116	1	9606
VTIAQGGVLPNIQAVLLPK	1	0	Unmodified	1930.1615	0.16153303	54	Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908	HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB	Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E	yes	no	0	0	0	3.33	1.49	1	1	1	1	2	22.872	22.872	2;3	2.139E-163	18691	DP1134_4	232.78	232.78			0.30246	0.35292	37.621	3	0	Median	171220000	130410000	40805000	1092	54	1007	1740;1741;1742;1743;1744;1745	3243;3244;3245;3246;3247;3248;3249;3250;3251;3252;3253;3254;3255;3256;3257;3258;3259;3260;3261;3262	3251		20	9606
VTMQNLNDR	0	1	Unmodified	1089.5237	0.52369213	15;14;8	CON__P13645;P13645;CON__P02535-1;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;CON__Q7Z3Y8;Q7Z3Z0;CON__Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9;CON__P02533;P02533;CON__A2A4G1;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8	KRT10;KRT28;KRT25;KRT27;KRT26;KRT14;KRT16	Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16	no	no	0	0	0	3	1.41	1	1	1	1	1	15.828	15.828	2	8.1065E-11	6861	DP1134_1	153.04	75.113		+	NaN	NaN	NaN	0	0	Median	991580000	991580000	0	1093	15;8;14	1008	1746;1747;1748;1749;1750	3263;3264;3265;3266;3267;3268;3269	3263		7	9606
VTQDELKEVFEDAAEIR	1	1	Unmodified	1990.9848	0.98475045	93	P19338	NCL	Nucleolin	yes	yes	0	0	1	2	0		1				21.918	21.918	3	2.7566E-06	17757	DP1134_2	122.46	102.59			1.522	1.5547	NaN	1	0	Median	10043000	3448900	6593600	1094	93	1009	1751	3270;3271	3270		2	9606
VTVAGGVHISGLHTESAPR	0	1	Unmodified	1886.9963	0.99625861	137	P49327	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	yes	yes	0	0	0	1	0	1					16.886	16.886	3	0.012224	8717	DP1134_1	48.848	18.311			NaN	NaN	NaN	0	0	Median	12544000	7664200	4880100	1095	137	1010	1752	3272	3272		1	9606
VTVLGQPK	1	0	Unmodified	840.5069	0.50690308	2	B9A064	IGLL5	Immunoglobulin lambda-like polypeptide 5	yes	yes	0	0	0	4	0				1		15.552	15.552	2	0.00097771	7253	DP1134_4	138.48	55.192			NaN	NaN	NaN	0	0	Median	30096000	30096000	0	1096	2	1011	1753	3273	3273		1	9606
VVEEAPSIFLDAETR	0	1	Unmodified	1674.8465	0.84646606	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				20.764	20.764	2	2.8377999999999996E-93	15974	DP1134_2	206.58	184.1			0.43383	0.50707	NaN	1	0	Median	93708000	63951000	29757000	1097	56	1012	1754	3274;3275;3276;3277	3274		4	9606
VVEEAPSIFLDAETRR	0	2	Unmodified	1830.9476	0.94757708	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	1	2	0		1				19.611	19.611	2	0.0027328	14368	DP1134_2	112.64	63.144			NaN	NaN	NaN	0	0	Median	19998000	19998000	0	1098	56	1013	1755	3278	3278		1	9606
VVEIAPAAHLDPQLR	0	1	Unmodified	1627.9046	0.90459006	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	1.5	0.5	2	2				18.6	18.6	2;3	4.7043E-154	11481	DP1134_1	207.34	207.34			0.40519	0.48686	12.775	4	0	Median	2834000000	1997999999.9999998	835970000	1099	78	1014	1756;1757;1758;1759	3279;3280;3281;3282;3283;3284;3285;3286;3287;3288	3282		10	9606
VVHSYEELEENYTR	0	1	Unmodified	1766.8111	0.81114318	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	0	0	2.25	1.3	2		1	1		17.861	17.861	3	1.8362E-50	10336	DP1134_1	183.06	148.63			0.54683	0.56308	NaN	1	0	Median	2289800000	1380800000	909030000	1100	78	1015	1760;1761;1762;1763	3289;3290;3291;3292;3293	3291		5	9606
VVLVLAGR	0	1	Unmodified	825.54362	0.54362294	152	P61353	RPL27	60S ribosomal protein L27	yes	yes	0	0	0	5	0					1	18.244	18.244	2	1.0578E-09	11238	DP1134_5	153.67	66.09			NaN	NaN	NaN	0	0	Median	15286000	15286000	0	1101	152	1016	1764	3294	3294		1	9606
VVSTHEQVLR	0	1	Unmodified	1166.6408	0.6407708	8	CON__P02533;P02533	KRT14	Keratin, type I cytoskeletal 14	yes	no	0	0	0	3	0			1			14.481	14.481	3	0.027229	5650	DP1134_3	94.692	6.0116		+	NaN	NaN	NaN	0	0	Median	5562000	5562000	0	1102	8	1017	1765	3295	3295		1	9606
VVSVLTVLHQDWLNGK	1	0	Unmodified	1806.9992	0.99921872	45;47	P01857;P01860	IGHG1;IGHG3	Ig gamma-1 chain C region;Ig gamma-3 chain C region	no	no	0	0	0	3	0.707		1	2	1		22.265	22.265	2;3	0	17778	DP1134_3	295.78	214.25			NaN	NaN	NaN	0	0	Median	44924000	44924000	0	1103	45;47	1018	1766;1767;1768;1769	3296;3297;3298;3299;3300;3301	3299		6	9606
VWDDGIIDPADTR	0	1	Unmodified	1471.6943	0.69432251	251	Q9HCC0	MCCC2	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	yes	yes	0	0	0	3.5	0.5			1	1		20.149	20.149	2	3.2162E-32	14287	DP1134_3	166.69	136.13			0.30789	0.34543	60.99	2	0	Median	223970000	147820000	76148000	1104	251	1019	1770;1771	3302;3303;3304;3305;3306;3307	3303		6	9606
VYACEVTHQGLSSPVTK	1	0	Unmodified	1874.9196	0.91964777	44	P01834	IGKC	Ig kappa chain C region	yes	yes	0	0	0	4	0				1		16.659	16.659	3	5.0904E-05	9163	DP1134_4	152.34	108.29			NaN	NaN	NaN	0	0	Median	143180000	143180000	0	1105	44	1020	1772	3308;3309;3310	3310		3	9606
VYAEDPYK	1	0	Unmodified	983.46001	0.46001246	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				15.893	15.893	2	0.013003	8428	DP1134_2	111.04	66.314			0.41059	0.50113	NaN	1	0	Median	83039000	56814000	26225000	1106	56	1021	1773	3311	3311		1	9606
VYNVTQHAVGIVVNK	1	0	Unmodified	1639.9046	0.90459006	130	P46778	RPL21	60S ribosomal protein L21	yes	yes	0	0	0	4	0				1		17.693	17.693	3	5.0986E-06	10895	DP1134_4	108.97	108.97			0.58635	0.68112	NaN	1	0	Median	17379000	10850000	6528200	1107	130	1022	1774	3312	3312		0	9606
VYNYNHLMPTR	0	1	Oxidation (M)	1422.6714	0.671419	152	P61353	RPL27	60S ribosomal protein L27	yes	yes	0	1	0	5	0					1	15.885	15.885	3	0.024454	7380	DP1134_5	64.224	37.865			NaN	NaN	NaN	0	0	Median	7431200	7431200	0	1108	152	1023	1775	3313	3313	153	1	9606
VYPLSSCCGDK	1	0	Unmodified	1284.5479	0.54785797	6	CON__ENSEMBL:ENSBTAP00000024466			yes	yes	0	0	0	2	1	1		1			16.595	16.595	2	0.0024223	8305	DP1134_3	120.99	91.516		+	NaN	NaN	NaN	0	0	Median	90597000	90597000	0	1109	6	1024	1776;1777	3314;3315;3316	3315		3	
WECKNDTLLGIK	2	0	Unmodified	1475.7442	0.74424959	101	P22897	MRC1	Macrophage mannose receptor 1	yes	yes	0	0	1	2	0		1				20.426	20.426	2	0.00095699	15641	DP1134_2	123.21	8.3135			NaN	NaN	NaN	0	0	Median	71356000	71356000	0	1110	101	1025	1778	3317;3318	3317		2	9606
WELLQQVDTSTR	0	1	Unmodified	1474.7416	0.74160705	51	P04264;CON__P04264	KRT1	Keratin, type II cytoskeletal 1	yes	no	0	0	0	2.67	0.943		2		1		20.362	20.362	2	4.1665E-82	15540	DP1134_2	217.14	143.47		+	NaN	NaN	NaN	0	0	Median	10775000	10775000	0	1111	51	1026	1779;1780;1781	3319;3320;3321	3319		3	9606
WMLAGRPHPTQK	1	1	Oxidation (M)	1436.7347	0.73468796	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	1	1	0	1					15.365	15.365	3	0.00020424	6129	DP1134_1	92.943	66.931			0.41027	0.49497	NaN	1	0	Median	90464000	64012000	26452000	1112	199	1027	1782	3322;3323;3324	3322	208	3	9606
WSYEMFR	0	1	Oxidation (M)	1033.4328	0.43275186	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	1	0	1	0	1					19.386	19.386	2	0.0066117	12674	DP1134_1	71.715	43.608			0.78482	0.96942	NaN	1	0	Median	40881000	23219000	17663000	1113	199	1028	1783	3325	3325	209	0	9606
WTLLQEQGTK	1	0	Unmodified	1202.6295	0.62953741	9;50;16	CON__P13647;P13647;CON__P02538;P02538;CON__P48668;CON__P04259;P48668;P04259	KRT5;KRT6A;KRT6C;KRT6B	Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6C;Keratin, type II cytoskeletal 6B	no	no	0	0	0	3	0			1			18.928	18.928	2	1.4447999999999998E-21	12830	DP1134_3	166.07	57.323		+	NaN	NaN	NaN	0	0	Median	142180000	142180000	0	1114	16;9;50	1029	1784	3326;3327	3326		2	9606
YAASSYLSLTPEQWK	1	0	Unmodified	1742.8516	0.85155143	2	B9A064;P0DOY3;P0DOY2;P0CG04;P0CF74;A0M8Q6	IGLL5;IGLC1;IGLC6;IGLC7	Immunoglobulin lambda-like polypeptide 5;Ig lambda-1 chain C regions;Ig lambda-6 chain C region;Ig lambda-7 chain C region	yes	no	0	0	0	4	0				1		21.104	21.104	2	0.016657	16205	DP1134_4	96.067	62.839			NaN	NaN	NaN	0	0	Median	11361000	11361000	0	1115	2	1030	1785	3328	3328		1	9606
YAASSYLSLTSSDWK	1	0	Unmodified	1677.7886	0.78861683	22	CON__Q1RMN8			yes	yes	0	0	0	4	0				1		20.806	20.806	2	5.4338999999999994E-132	15751	DP1134_4	222.18	177.54		+	NaN	NaN	NaN	0	0	Median	101520000	101520000	0	1116	22	1031	1786	3329	3329		1	
YALYDATYETK	1	0	Unmodified	1336.6187	0.61869795	103	Q9Y281;P23528	CFL2;CFL1	Cofilin-2;Cofilin-1	yes	no	0	0	0	5	0					1	18.37	18.37	2	1.3154E-08	11520	DP1134_5	143.03	91.974			NaN	NaN	NaN	0	0	Median	2320800	2320800	0	1117	103	1032	1787	3330	3330		1	9606
YDGIILPGK	1	0	Unmodified	974.54368	0.54368251	173	P62913	RPL11	60S ribosomal protein L11	yes	yes	0	0	0	4	0				1		18.726	18.726	2	0.013654	12561	DP1134_4	109.01	75.462			1.2083	1.4036	NaN	1	0	Median	10372000	4986100	5385900	1118	173	1033	1788	3331	3331		1	9606
YDSAPATDGSGTALGWTVAWK	1	0	Unmodified	2153.0065	0.006548526	25	CON__Streptavidin			yes	yes	0	0	0	3	1.58	1	1		1	1	21.801	21.801	2;3	5.876100000000001E-98	16354	DP1134_1	206.67	157.04		+	NaN	NaN	NaN	0	0	Median	50893000	50893000	0	1119	25	1034	1789;1790;1791;1792	3332;3333;3334;3335	3332		4	
YDSAPATDGSGTALGWTVAWKNNYR	1	1	Unmodified	2700.2568	0.25684299	25	CON__Streptavidin			yes	yes	0	0	1	5	0					1	20.307	20.307	3	5.0205E-41	14431	DP1134_5	167.89	129.14		+	NaN	NaN	NaN	0	0	Median	20702000	0	20702000	1120	25	1035	1793	3336;3337	3336		2	
YEELQITAGR	0	1	Unmodified	1178.5932	0.5931519	51;50	P04264;CON__P04264;P04259	KRT1;KRT6B	Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B	no	no	0	0	0	2.5	0.5		1	1			17.817	17.817	2	1.3175E-235	11426	DP1134_2	262.2	148.31		+	NaN	NaN	NaN	0	0	Median	964230000	964230000	0	1121	51;50	1036	1794;1795	3338;3339;3340;3341	3338		4	9606
YEELQQTAGR	0	1	Unmodified	1193.5677	0.56766543	16	CON__P13647;P13647	KRT5	Keratin, type II cytoskeletal 5	no	no	0	0	0	3.25	1.48	1		1	1	1	15.337	15.337	2	1.5407999999999998E-28	6826	DP1134_4	172.21	127.82		+	NaN	NaN	NaN	0	0	Median	247940000	247940000	0	1122	16	1037	1796;1797;1798;1799	3342;3343;3344;3345	3344		4	9606
YEELQVTVGR	0	1	Unmodified	1192.6088	0.60880197	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	4	0				1		17.878	17.878	2	1.9937E-63	11207	DP1134_4	196.99	115.21		+	NaN	NaN	NaN	0	0	Median	5696500	5696500	0	1123	18	1038	1800	3346	3346		1	9606
YENEVALR	0	1	Unmodified	992.49271	0.49270958	15	CON__P13645;P13645	KRT10	Keratin, type I cytoskeletal 10	yes	no	0	0	0	3	0			1			16.194	16.194	2	0.030173	8243	DP1134_3	133.81	79.655		+	NaN	NaN	NaN	0	0	Median	0	0	0	1124	15	1039	1801	3347	3347		1	9606
YFPTQALNFAFK	1	0	Unmodified	1445.7343	0.73433683	80	P12236	SLC25A6	ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed	no	no	0	0	0	2.5	1.5	1			1		22.198	22.198	2	9.6045E-05	17731	DP1134_4	120.87	93.225			0.52917	0.6147	NaN	1	0	Median	59045000	41639000	17406000	1125	80	1040	1802;1803	3348;3349;3350;3351;3352;3353	3351		6	9606
YGDGGSSFQSTTGHCVHMR	0	1	Oxidation (M)	2098.8585	0.85852086	145	P55795	HNRNPH2	Heterogeneous nuclear ribonucleoprotein H2	yes	yes	0	1	0	3	0			1			14.805	14.805	3	0.026064	5984	DP1134_3	61.524	53.21			NaN	NaN	NaN	0	0	Median	4500100	0	4500100	1126	145	1041	1804	3354	3354	150	1	9606
YGDGGSTFQSTTGHCVHMR	0	1	Oxidation (M)	2112.8742	0.87417092	113	P31943	HNRNPH1	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed	yes	yes	0	1	0	3	0			2			14.903	14.903	3;4	0.0067654	6304	DP1134_3	50.966	45.142			3.5715	4.3659	NaN	1	0	Median	126150000	13241000	112910000	1127	113	1042	1805;1806	3355;3356;3357	3355	117	3	9606
YICDNQDTISSK	1	0	Unmodified	1442.6348	0.63475872	13	CON__P02769			yes	yes	0	0	0	2.5	0.5		1	1			15.657	15.657	2	1.9553E-43	7967	DP1134_2	177.06	83.414		+	NaN	NaN	NaN	0	0	Median	410950000	410950000	0	1128	13	1043	1807;1808	3358;3359;3360;3361	3358		4	
YICENQDSISSK	1	0	Unmodified	1442.6348	0.63475872	12	CON__P02768-1;P02768	ALB	Serum albumin	yes	no	0	0	0	2	0		1				15.698	15.698	2	0.0099005	7682	DP1134_2	108.43	10.391		+	NaN	NaN	NaN	0	0	Median	129110000	129110000	0	1129	12	1044	1809	3362	3362		1	9606
YKITDIIGKEEGIGPENLR	2	1	Unmodified	2144.1477	0.14773345	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	2	1	0	1					19.891	19.891	3	3.6556E-140	13481	DP1134_1	218.14	196.46			0.43115	0.47806	NaN	1	0	Median	145780000	101110000	44670000	1130	199	1045	1810	3363;3364;3365;3366;3367	3366		5	9606
YKPESEELTAER	1	1	Unmodified	1450.694	0.69398816	63	P07237	P4HB	Protein disulfide-isomerase	yes	yes	0	0	1	3	0			1			15.337	15.337	3	0.0080983	6849	DP1134_3	98.105	38.95			NaN	NaN	NaN	0	0	Median	0	0	0	1131	63	1046	1811	3368	3368		1	9606
YKPLDLRPK	2	1	Unmodified	1128.6655	0.66552898	128	P42766	RPL35	60S ribosomal protein L35	yes	yes	0	0	2	5	0					1	15.744	15.744	3	0.004447	7140	DP1134_5	113.26	68.234			NaN	NaN	NaN	0	0	Median	6750400	6750400	0	1132	128	1047	1812	3369;3370	3369		2	9606
YLAEVATGDDKKR	2	1	Unmodified	1464.7573	0.75725712	114	P31947	SFN	14-3-3 protein sigma	yes	yes	0	0	2	2.5	1.5	1			1		14.53	14.53	3	6.1163E-06	5778	DP1134_4	166.11	104.69			NaN	NaN	NaN	0	0	Median	25503000	25503000	0	1133	114	1048	1813;1814	3371;3372;3373;3374	3372		4	9606
YLDGLTAER	0	1	Unmodified	1036.5189	0.51892433	18	CON__P35908v2;CON__P35908;P35908	KRT2	Keratin, type II cytoskeletal 2 epidermal	yes	no	0	0	0	3	0.816		1	1	1		17.871	17.871	2	8.2221E-17	10945	DP1134_3	162.25	82.799		+	NaN	NaN	NaN	0	0	Median	187570000	187570000	0	1134	18	1049	1815;1816;1817	3375;3376;3377	3376		3	9606
YLGYLEQLLR	0	1	Unmodified	1266.6972	0.69722304	10	CON__P02662			yes	yes	0	0	0	3	1.41	1	1	1	1	1	22.972	22.972	2	0.0022897	18356	DP1134_5	150.4	99.333		+	NaN	NaN	NaN	0	0	Median	35805000	35805000	0	1135	10	1050	1818;1819;1820;1821;1822	3378;3379;3380;3381;3382;3383;3384	3384		7	
YLSSVSSQETQGGPLAPMTGTIEK	1	0	Oxidation (M)	2496.2054	0.20538427	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	1	0	2	0		2				18.411	18.411	2;3	4.008E-162	12583	DP1134_2	222.42	205.35			0.39569	0.48294	NaN	1	0	Median	162220000	128520000	33697000	1136	241	1051	1823;1824	3385;3386;3387;3388	3386	252	4	9606
YLSSVSSQETQGGPLAPMTGTIEK	1	0	Unmodified	2480.2105	0.21046965	241	Q96RQ3	MCCC1	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial	yes	yes	0	0	0	2	0		2				19.795	19.795	2;3	0	14585	DP1134_2	326.09	326.09			0.47265	0.57687	NaN	1	0	Median	75194000	51335000	23859000	1137	241	1051	1825;1826	3389;3390;3391;3392;3393;3394	3390		6	9606
YLYEIAR	0	1	Unmodified	926.48617	0.48616764	13;12	CON__P02769;CON__P02768-1;P02768	ALB	Serum albumin	no	no	0	0	0	2	0		1				18.21	18.21	2	1.3494999999999998E-21	12209	DP1134_2	170.43	0		+	NaN	NaN	NaN	0	0	Median	296560000	296560000	0	1138	13;12	1052	1827	3395	3395		1	9606
YLYLTPQDYK	1	0	Unmodified	1302.6496	0.64960415	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	0	1	0	1					19.591	19.591	2	5.145299999999999E-28	12968	DP1134_1	167.23	148.13			0.51057	0.61697	NaN	1	0	Median	246830000	160790000	86041000	1139	199	1053	1828	3396;3397	3396		2	9606
YLYLTPQDYKR	1	1	Unmodified	1458.7507	0.75071518	199	Q13085	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	yes	yes	0	0	1	1	0	2					18.294	18.294	2;3	1.0494999999999999E-65	11004	DP1134_1	195.32	167.58			0.55667	0.67159	1.6073	2	0	Median	473150000	283300000	189860000	1140	199	1054	1829;1830	3398;3399;3400;3401;3402;3403;3404;3405;3406	3403		9	9606
YLYLTPQDYTR	0	1	Unmodified	1431.7034	0.70343063	28	O00763	ACACB	Acetyl-CoA carboxylase 2;Biotin carboxylase	yes	yes	0	0	0	1	0	1					19.979	19.979	2	0.0050186	13519	DP1134_1	93.096	66.581			0.54408	0.67205	NaN	1	0	Median	12825000	9125300	3699900	1141	28	1055	1831	3407	3407		1	9606
YNGVFQECCQAEDKGACLLPK	2	0	Unmodified	2486.1029	0.10285023	13	CON__P02769			yes	yes	0	0	1	2	0		1				19.111	19.111	3	0.0066142	13457	DP1134_2	111.62	86.828		+	NaN	NaN	NaN	0	0	Median	36253000	36253000	0	1142	13	1056	1832	3408;3409	3408		2	
YNILGTNAIMDK	1	0	Unmodified	1351.6806	0.6805867	248	Q9BUJ2	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	yes	yes	0	0	0	2	0		1				19.94	19.94	2	2.6509E-11	14777	DP1134_2	147.74	106.75			NaN	NaN	NaN	0	0	Median	5896100	0	5896100	1143	248	1057	1833	3410	3410		1	9606
YQAVTATLEEK	1	0	Unmodified	1251.6347	0.63468237	124	P40429;Q6NVV1	RPL13A;RPL13AP3	60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3	yes	no	0	0	0	4	0				1		17.046	17.046	2	4.6218E-08	9658	DP1134_4	142.43	120.19			0.57757	0.67092	NaN	1	0	Median	102490000	62823000	39668000	1144	124	1058	1834	3411;3412	3411		2	9606
YRPGTVALR	0	2	Unmodified	1031.5876	0.58761301	180	Q71DI3;Q16695;P84243;P68431;Q5TEC6;Q6NXT2	HIST2H3A;HIST3H3;H3F3A;HIST1H3A;HIST2H3PS2;H3F3C	Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3;Histone H3.3C	yes	no	0	0	1	5	0					2	15.354	15.354	2;3	0.0089637	6636	DP1134_5	103.55	64.584			0.46162	0.48371	6.3795	2	0	Median	607900000	410220000	197680000	1145	180	1059	1835;1836	3413;3414;3415;3416	3413		3	9606
YSLDPENPTK	1	0	Unmodified	1162.5506	0.55061839	92	P18621	RPL17	60S ribosomal protein L17	yes	yes	0	0	0	4	0				1		17.207	17.207	2	7.5025E-51	10049	DP1134_4	186.76	157.1			0.43297	0.50296	NaN	1	0	Median	36688000	25393000	11295000	1146	92	1060	1837	3417;3418;3419	3419		3	9606
YSLQYYMGLAEELVR	0	1	Oxidation (M)	1849.892	0.89203604	78	P11498	PC	Pyruvate carboxylase, mitochondrial	yes	yes	0	1	0	1.5	0.5	2	2				23.19	23.19	2;3	9.1875E-76	18215	DP1134_1	193.15	173.49			0.5639	0.67756	37.306	4	0	Median	62109000	38330000	23778000	1147	78	1061	1838;1839;1840;1841	3420;3421;3422;3423;3424;3425;3426;3427;3428;3429;3430;3431	3421	100	12	9606
YSSAGTVEFLVDSK	1	0	Unmodified	1501.73	0.73003931	56	P05165	PCCA	Propionyl-CoA carboxylase alpha chain, mitochondrial	yes	yes	0	0	0	2	0		1				20.079	20.079	2	1.1213E-152	14951	DP1134_2	229.82	159.79			NaN	NaN	NaN	0	0	Median	72056000	54891000	17165000	1148	56	1062	1842	3432;3433	3432		2	9606
YTACLCDDNPK	1	0	Unmodified	1355.5486	0.54858625	81	P12273	PIP	Prolactin-inducible protein	yes	yes	0	0	0	5	0					1	15.887	15.887	2	1.242E-08	7350	DP1134_5	143.37	118.55			NaN	NaN	NaN	0	0	Median	17018000	17018000	0	1149	81	1063	1843	3434;3435	3434		2	9606
YYVTIIDAPGHR	0	1	Unmodified	1403.7197	0.7197494	177	P68104;Q5VTE0	EEF1A1;EEF1A1P5	Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3	yes	no	0	0	0	4	1			1		1	18.284	18.284	3	0.0062781	11673	DP1134_3	84.687	56.773			NaN	NaN	NaN	0	0	Median	35478000	35478000	0	1150	177	1064	1844;1845	3436;3437	3436		2	9606
