pLink MS/MS Analysis Report

2024-12-9 automatically created by pLink 3.0.11

1. Cross-Linked Results

Table 1 Identification of Cross-Linked Results Under 1% FDR at Spectrum Level.

#(Spectra) | #(Peptide Pairs) | #(Linked Sites)
59 | 55 | 69

2. All Results

Table 2 Identification of Spectra Under 1% FDR Control.

Types | Cross-Linked Spectra | Loop-Linked Spectra | Mono-Linked Spectra | Regular Spectra
| Counts | 59 | 4 | 16 | 1303
Percent | 4.3% | 0.3% | 1.2% | 94.3%

Table 3 Identification of Peptides (Pairs) Under 1% FDR Control.

Types | Cross-Linked Peptide Pairs | Loop-Linked Peptides | Mono-Linked Peptides | Regular Peptides
| Counts | 55 | 4 | 13 | 660
Percent | 7.5% | 0.5% | 1.8% | 90.2%

Table 4 Identification of Linked Sites Under 1% FDR Control.

Types | Cross-Linked Sites (Group) | Loop-Linked Sites (Group)
| Counts | 69 (55) | 4 (4)
Percent | 94.5% | 5.5%

3. FDR Curve

Figure 1 FDR Curve.

4. Precursor Error Distribution

Figure 2 All Precursor Error Distribution.

Figure 3 Filtered Precursor Error Distribution.

5. Running Time

Table 5 Running Time of Identification

Start Time | Mon Dec 09 13:26:29 2024
End Time | Mon Dec 09 14:22:30 2024
Time Cost | 3361.15s