pLink MS/MS Analysis Report

2025-4-2 automatically created by pLink 3.0.16

 

1. Cross-Linked Results

Table 1 Identification of Cross-Linked Results Under 1% FDR at Peptide Level.

#(Spectra) #(Peptide Pairs) #(Linked Sites)
2883 1813 3466

2. All Results

Table 2 Identification of Spectra Under 1% FDR Control.

Types Cross-Linked Spectra Loop-Linked Spectra Mono-Linked Spectra Regular Spectra
Counts 2883 420 3615 22707
Percent 9.7% 1.4% 12.2% 76.6%

Table 3 Identification of Peptides (Pairs) Under 1% FDR Control.

Types Cross-Linked Peptide Pairs Loop-Linked Peptides Mono-Linked Peptides Regular Peptides
Counts 1813 329 2504 9542
Percent 12.8% 2.3% 17.6% 67.3%

Table 4 Identification of Linked Sites Under 1% FDR Control.

Types Cross-Linked Sites (Group) Loop-Linked Sites (Group)
Counts 3466 (1603) 312 (280)
Percent 91.7% 8.3%

 

3. FDR Curve

Figure 1 FDR Curve.

Could not Find FDR Curve Image.

 

4. Precursor Error Distribution

Figure 2 All Precursor Error Distribution.

Could not Find All Precursor Error Distribution Image.

Figure 3 Filtered Precursor Error Distribution.

Could not Find Filtered Precursor Error Distribution Image.

 

5. Running Time

Table 5 Running Time of Identification

Start Time Wed Apr 02 13:28:13 2025
End Time Wed Apr 02 13:29:22 2025
Time Cost 68.897s