pLink MS/MS Analysis Report

2025-4-2 automatically created by pLink 3.0.16

 

1. Cross-Linked Results

Table 1 Identification of Cross-Linked Results Under 1% FDR at Peptide Level.

#(Spectra) #(Peptide Pairs) #(Linked Sites)
3162 2018 4186

2. All Results

Table 2 Identification of Spectra Under 1% FDR Control.

Types Cross-Linked Spectra Loop-Linked Spectra Mono-Linked Spectra Regular Spectra
Counts 3162 411 4364 25650
Percent 9.4% 1.2% 13.0% 76.4%

Table 3 Identification of Peptides (Pairs) Under 1% FDR Control.

Types Cross-Linked Peptide Pairs Loop-Linked Peptides Mono-Linked Peptides Regular Peptides
Counts 2018 327 3041 10818
Percent 12.5% 2.0% 18.8% 66.8%

Table 4 Identification of Linked Sites Under 1% FDR Control.

Types Cross-Linked Sites (Group) Loop-Linked Sites (Group)
Counts 4186 (1764) 319 (280)
Percent 92.9% 7.1%

 

3. FDR Curve

Figure 1 FDR Curve.

Could not Find FDR Curve Image.

 

4. Precursor Error Distribution

Figure 2 All Precursor Error Distribution.

Could not Find All Precursor Error Distribution Image.

Figure 3 Filtered Precursor Error Distribution.

Could not Find Filtered Precursor Error Distribution Image.

 

5. Running Time

Table 5 Running Time of Identification

Start Time Wed Apr 02 13:37:44 2025
End Time Wed Apr 02 13:38:57 2025
Time Cost 72.758s