pLink MS/MS Analysis Report

2025-1-1 automatically created by pLink 3.0.11

 

1. Cross-Linked Results

Table 1 Identification of Cross-Linked Results Under 1% FDR at Spectrum Level.

#(Spectra) #(Peptide Pairs) #(Linked Sites)
312 247 333

2. All Results

Table 2 Identification of Spectra Under 1% FDR Control.

Types Cross-Linked Spectra Loop-Linked Spectra Mono-Linked Spectra Regular Spectra
Counts 312 57 380 2147
Percent 10.8% 2.0% 13.1% 74.1%

Table 3 Identification of Peptides (Pairs) Under 1% FDR Control.

Types Cross-Linked Peptide Pairs Loop-Linked Peptides Mono-Linked Peptides Regular Peptides
Counts 247 48 280 1139
Percent 14.4% 2.8% 16.3% 66.5%

Table 4 Identification of Linked Sites Under 1% FDR Control.

Types Cross-Linked Sites (Group) Loop-Linked Sites (Group)
Counts 333 (237) 51 (43)
Percent 86.7% 13.3%

 

3. FDR Curve

Figure 1 FDR Curve.

Could not Find FDR Curve Image.

 

4. Precursor Error Distribution

Figure 2 All Precursor Error Distribution.

Could not Find All Precursor Error Distribution Image.

Figure 3 Filtered Precursor Error Distribution.

Could not Find Filtered Precursor Error Distribution Image.

 

5. Running Time

Table 5 Running Time of Identification

Start Time Tue Dec 31 20:36:06 2024
End Time Wed Jan 01 02:00:31 2025
Time Cost 19465.2s