pLink MS/MS Analysis Report

2025-1-7 automatically created by pLink 3.0.11

 

1. Cross-Linked Results

Table 1 Identification of Cross-Linked Results Under 1% FDR at Spectrum Level.

#(Spectra) #(Peptide Pairs) #(Linked Sites)
286 239 388

2. All Results

Table 2 Identification of Spectra Under 1% FDR Control.

Types Cross-Linked Spectra Loop-Linked Spectra Mono-Linked Spectra Regular Spectra
Counts 286 114 211 3314
Percent 7.3% 2.9% 5.4% 84.4%

Table 3 Identification of Peptides (Pairs) Under 1% FDR Control.

Types Cross-Linked Peptide Pairs Loop-Linked Peptides Mono-Linked Peptides Regular Peptides
Counts 239 90 161 1770
Percent 10.6% 4.0% 7.1% 78.3%

Table 4 Identification of Linked Sites Under 1% FDR Control.

Types Cross-Linked Sites (Group) Loop-Linked Sites (Group)
Counts 388 (225) 89 (75)
Percent 81.3% 18.7%

 

3. FDR Curve

Figure 1 FDR Curve.

Could not Find FDR Curve Image.

 

4. Precursor Error Distribution

Figure 2 All Precursor Error Distribution.

Could not Find All Precursor Error Distribution Image.

Figure 3 Filtered Precursor Error Distribution.

Could not Find Filtered Precursor Error Distribution Image.

 

5. Running Time

Table 5 Running Time of Identification

Start Time Tue Jan 07 14:26:40 2025
End Time Tue Jan 07 14:46:49 2025
Time Cost 1208.69s